LOCUS       DAPGWB010000001        86219 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.001, whole genome shotgun sequence.
ACCESSION   DAPGWB010000001 DAPGWB010000000
VERSION     DAPGWB010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 86219)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 86219)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..86219
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.001"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            88..531
                     /gene="cmtB"
                     /locus_tag="RHX79_000001"
     CDS             88..531
                     /gene="cmtB"
                     /locus_tag="RHX79_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IIA"
                     /protein_id="HDV2195226.1"
                     /translation="MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQ
                     AIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIG
                     LSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG"
     gene            559..1947
                     /gene="cmtA"
                     /locus_tag="RHX79_000002"
     CDS             559..1947
                     /gene="cmtA"
                     /locus_tag="RHX79_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HDV2195227.1"
                     /translation="MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWL
                     PNEHFAKIVGPMITYLLPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSM
                     IMGPLGGLVIKYVDKALEKRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANT
                     FVKECIEALVHAGYLPLLSVINEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMV
                     ASNPGPGLGLLLAFTLFGKGMSKRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIA
                     GGMSGTWMFNLLDGGLVAGPSPGSIFAYLALTPKGSFLATIAGVTVGTLVSFAITSLI
                     LKMEKTVETESEDKFAQSANAVKAMKQEGAFSLSRVKRIAFVCDAGMGSSAMGATTFR
                     KRLEKAGLAIEVKHYAIENVPADADIVVTHASLEGRVKRVTDKPLILINNYIGDPKLD
                     TLFNQLTAEHKH"
     gene            1962..3239
                     /locus_tag="RHX79_000003"
     CDS             1962..3239
                     /locus_tag="RHX79_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HDV2195228.1"
                     /translation="MKTKVAAIYGKRDVRLREFELPEITDNELLVSVISDSVCLSTWK
                     AALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSG
                     YSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHANYH
                     TTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQV
                     QKLLPVDLAASKGIELVYVNTKGMSDPVQTLRALTGDVGFDDIFVYAAVPAVVEMADE
                     LLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQL
                     QPSFMVTHIGGLDAVPDTVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKE
                     LARLVEETHGIWNEQAEKYLLAQFGVDIGEAAQ"
     gene            3236..4201
                     /gene="yggF"
                     /locus_tag="RHX79_000004"
     CDS             3236..4201
                     /gene="yggF"
                     /locus_tag="RHX79_000004"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HDV2195229.1"
                     /translation="MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALN
                     DVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAV
                     MAFAPRDSLLHAPDMYMKKLVVNRLAAGAIDLSLPLADNLRNVARALGKPLDKLRMVT
                     LDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISAC
                     AVKALGGDMQAELIDFCQAKGDYTENRQIAEQERKRCKAMGVDVNRVYSLDELVRGND
                     ILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSLH"
     gene            4223..4732
                     /gene="fumE"
                     /locus_tag="RHX79_000005"
     CDS             4223..4732
                     /gene="fumE"
                     /locus_tag="RHX79_000005"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarase E"
                     /protein_id="HDV2195230.1"
                     /translation="MATLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVD
                     NDEEIVEYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQYWHYLNEQD
                     ETPGFADDMTWDFISNVNSITCNATLYDALKAMKFADFAVWSEARFSGMVKTALTLAV
                     TTTLKELTP"
     gene            4729..5442
                     /locus_tag="RHX79_000006"
     CDS             4729..5442
                     /locus_tag="RHX79_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside/nucleotide kinase family protein"
                     /protein_id="HDV2195231.1"
                     /translation="MKIELTVNGLNVQAQYHDEEIERVHKPLLRMLAALQTVSPQRRT
                     VVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGA
                     PETFDVAKLAENLCQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK
                     WCQLAQFCDFSIFINAPATALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEES
                     LPANLTLMMTATGEYRLVD"
     gene            complement(5414..6091)
                     /locus_tag="RHX79_000007"
     CDS             complement(5414..6091)
                     /locus_tag="RHX79_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708691.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDV2195232.1"
                     /translation="MLTLNKISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKST
                     LLRVMAGLLTPTAGTVMLQQQAMKNLKNRQRAAKVGVLFQEAENQLFHSTVADEIAFG
                     LKLQKCPADEITQRTHAALQCCQLADTANSHPLDLHSAQRRMVAVACLEALSPPLLLL
                     DEPSRDFDENWLSVFESWLEKCGQRGTSVVAISHDAAFTRRHFSRVVRLEDGLIRNVN
                     PPDDIHP"
     gene            complement(6085..6762)
                     /locus_tag="RHX79_000008"
     CDS             complement(6085..6762)
                     /locus_tag="RHX79_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HDV2195233.1"
                     /translation="MVTLEQFRYCPTHSTHPPFCYDFHYVKPGMVAIFGDNGSGKSTL
                     AQLMAGWYPDFLPGEITGTGTLLGTPIGHLPLNEQSATIQLVQQSPYLQLSGCTFSVE
                     EEVAFGPENLCLAEAEIMARIDAALTLTECQPLRHRHPATLSGGETQRVVIACAIAMQ
                     PKLLILDEAFSRLTPQASEMLLQRLQHWAFERGSLIILFERHRTPFLNYCQQAWQLQN
                     GALQPLC"
     gene            complement(6750..7457)
                     /locus_tag="RHX79_000009"
     CDS             complement(6750..7457)
                     /locus_tag="RHX79_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HDV2195234.1"
                     /translation="MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATR
                     RRAKYVVWLMFSLGAGLWLVHGGWLPEWLSGTPRSPERWSHAITLWLRILAIVSTSQL
                     WMQYVPVQCFIRALFASRLPPGVAYLFAGPLLVVEQLKRQLAIIHEAQRARGVPLDEG
                     WYQRLRAMPALIIPLTHNALNDLAIRGAALDMRAFRIHNRRTTLWAPADSTLQRVARY
                     TMILLMLTEFGAWIWLR"
     gene            complement(7458..8036)
                     /locus_tag="RHX79_000010"
     CDS             complement(7458..8036)
                     /locus_tag="RHX79_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HDV2195235.1"
                     /translation="MARSHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSIGTLI
                     SAVLLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVAGWLARAGWFRTLPKV
                     VVSGVIITLAVTVVAVPLRTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANL
                     VDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR"
     gene            complement(8059..8490)
                     /locus_tag="RHX79_000011"
     CDS             complement(8059..8490)
                     /locus_tag="RHX79_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDV2195236.1"
                     /translation="MMTLPYPYSSSARFYALRLLPGQEVFSQLHAFAQQHQLHAAWIA
                     GCTGSLTDVALRYAGQEGTTLLNGTFEVISLNGTLELSGEHLHLCVSDPHGTMLGGHM
                     MPGCTVRTTLELVIGSLEELAFSRQPCALSGYDELHISPVK"
     gene            8862..9881
                     /gene="epd"
                     /locus_tag="RHX79_000012"
     CDS             8862..9881
                     /gene="epd"
                     /locus_tag="RHX79_000012"
                     /EC_number="1.2.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythrose-4-phosphate dehydrogenase"
                     /protein_id="HDV2195237.1"
                     /translation="MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGM
                     AHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGV
                     YGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCI
                     IPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAG
                     ITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIV
                     DYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA
                     TVAFR"
     gene            9931..11094
                     /gene="pgk"
                     /locus_tag="RHX79_000013"
     CDS             9931..11094
                     /gene="pgk"
                     /locus_tag="RHX79_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDV2195238.1"
                     /translation="MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTI
                     ELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVA
                     EGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADV
                     ACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA
                     NTFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVND
                     VKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA
                     FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK"
     gene            11309..12388
                     /gene="fbaA"
                     /locus_tag="RHX79_000014"
     CDS             11309..12388
                     /gene="fbaA"
                     /locus_tag="RHX79_000014"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDV2195239.1"
                     /translation="MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSIN
                     AVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG
                     VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSK
                     YLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFT
                     IAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIK
                     DSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVW
                     LRAGQTSMIARLEKAFQELNAIDVL"
     gene            12746..13606
                     /gene="mscS"
                     /locus_tag="RHX79_000015"
     CDS             12746..13606
                     /gene="mscS"
                     /locus_tag="RHX79_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small-conductance mechanosensitive channel MscS"
                     /protein_id="HDV2195240.1"
                     /translation="MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLII
                     ARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGA
                     AGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADG
                     KIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKD
                     REMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVN
                     FKRVKEDKAA"
     gene            13745..14380
                     /gene="argO"
                     /locus_tag="RHX79_000016"
     CDS             13745..14380
                     /gene="argO"
                     /locus_tag="RHX79_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine exporter ArgO"
                     /protein_id="HDV2195241.1"
                     /translation="MFSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCA
                     ISDLVLICAGIFGGSALLMQSPWLLALVTWGGVVFLLWYGFGAFKTAMSSNIELASAE
                     VLKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWF
                     FGLAILAAWLAPRLRTAKSQRIINLVVGCVMWFIALQLARDGIAHAQALFS"
     gene            14473..15213
                     /locus_tag="RHX79_000017"
     CDS             14473..15213
                     /locus_tag="RHX79_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative stress defense protein"
                     /protein_id="HDV2195242.1"
                     /translation="MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDI
                     ATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDG
                     KSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKA
                     AIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQA
                     AIQFDDQVDVVFQLEPVDQQPAKTPAAQ"
     gene            15380..16276
                     /locus_tag="RHX79_000018"
     CDS             15380..16276
                     /locus_tag="RHX79_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417396.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2195243.1"
                     /translation="MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEE
                     QIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT
                     YPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN
                     LTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGIN
                     PTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI
                     RNHRYTATMLQHIAEDRDGTNH"
     gene            complement(16273..17751)
                     /gene="scpC"
                     /locus_tag="RHX79_000019"
     CDS             complement(16273..17751)
                     /gene="scpC"
                     /locus_tag="RHX79_000019"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA:succinate CoA transferase"
                     /protein_id="HDV2195244.1"
                     /translation="METQWTRMTADEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARR
                     ANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSF
                     VDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIE
                     LNHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPD
                     AGNMLDKQNPMCQQIADNVVTFLLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENP
                     EIPPFMMYSEVLQESVVHLLETGKISGASASSLTISADSLRKIYDNMDYFASRIVLRP
                     QEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSI
                     FMAPSIAKEGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCA
                     HPMYRDYLHRYLENAPGGHIHHDLSHVFDLHRNLIATGSMLG"
     gene            complement(17775..18560)
                     /gene="scpB"
                     /locus_tag="RHX79_000020"
     CDS             complement(17775..18560)
                     /gene="scpB"
                     /locus_tag="RHX79_000020"
                     /EC_number="7.2.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311816.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA decarboxylase"
                     /protein_id="HDV2195245.1"
                     /translation="MSYQYVNVATINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLN
                     RPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISM
                     VEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKEL
                     IFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGE
                     AHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH"
     gene            complement(18571..19566)
                     /gene="meaB"
                     /locus_tag="RHX79_000021"
     CDS             complement(18571..19566)
                     /gene="meaB"
                     /locus_tag="RHX79_000021"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HDV2195246.1"
                     /translation="MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLL
                     DAIMPYCGNALRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSIL
                     GDKTRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQS
                     ETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLLVINKDDGDNHTNVAIARHMYE
                     SALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTASGRLQQVRQQQSVE
                     WLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD"
     gene            complement(19559..21703)
                     /gene="scpA"
                     /locus_tag="RHX79_000022"
     CDS             complement(19559..21703)
                     /gene="scpA"
                     /locus_tag="RHX79_000022"
                     /EC_number="5.4.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
                     /protein_id="HDV2195247.1"
                     /translation="MSNVQEWQQLANKELSRREKTVDSLVQQTAEGIAIKPLYTEADL
                     DNLEVTGTLPGLPPYVRGPRATMYTAQPWTIRQYAGFSTAKESNAFYRRNLAAGQKGL
                     SVAFDLATHRGYDSDNPRVAGDVGKAGVAIDTVEDMKVLFDQIPLDKMSVSMTMNGAV
                     LPVLAFYIVAAEEQGVTPDKLTGTIQNDILKEYLCRNTYIYPPKPSMRIIADIIAWCS
                     GNMPRFNTISISGYHMGEAGANCVQQVAFTLADGIEYIKAAISAGLKIDDFAPRLSFF
                     FGIGMDLFMNVAMLRAARYLWSEAVSGFGAQDPKSLALRTHCQTSGWSLTEQDPYNNV
                     IRTTIEALAATLGGTQSLHTNAFDEALGLPTDFSARIARNTQIIIQEESELCRTVDPL
                     AGSYYIESLTDQIVKQARAIIQQIDEAGGMAKAIEAGLPKRMIEEASAREQSLIDQGK
                     RVIVGVNKYKLDHEDETDVLEIDNVMVRNEQIASLERIRATRDDAAVTAALNALTHAA
                     QHNENLLAAAVNAARVRATLGEISDALEAAFDRYLVPSQCVTGVIAQSYHQSEKSASE
                     FDAIVAQTEQFLADNGRRPRILIAKMGQDGHDRGAKVIASAYSDLGFDVDLSPMFSTP
                     EEIARLAVENDVHVVGASSLAAGHKTLIPELVEALKKWGREDICVVAGGVIPPQDYAF
                     LQERGVAAIYGPGTPMLDSVRGVLNLISQHHD"
     gene            complement(21907..22800)
                     /gene="argP"
                     /locus_tag="RHX79_000023"
     CDS             complement(21907..22800)
                     /gene="argP"
                     /locus_tag="RHX79_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator ArgP"
                     /protein_id="HDV2195248.1"
                     /translation="MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN
                     MFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL
                     ATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG
                     ALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC
                     HIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES
                     RMMRKVTDALLDYGHKVLRQD"
     gene            22942..23172
                     /locus_tag="RHX79_000024"
     CDS             22942..23172
                     /locus_tag="RHX79_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001328908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195249.1"
                     /translation="MHFAQRVRALVVLNGVALLPQFACKQGLANGELVRLFAPWSGIP
                     RLLHALFAGRKGMPAIARYFMDELTTRLANGV"
     gene            23228..23887
                     /gene="rpiA"
                     /locus_tag="RHX79_000025"
     CDS             23228..23887
                     /gene="rpiA"
                     /locus_tag="RHX79_000025"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HDV2195250.1"
                     /translation="MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKG
                     QIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR
                     EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGV
                     VTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV
                     K"
     gene            24143..25375
                     /gene="serA"
                     /locus_tag="RHX79_000026"
     CDS             24143..25375
                     /gene="serA"
                     /locus_tag="RHX79_000026"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDV2195251.1"
                     /translation="MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDD
                     EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVF
                     NAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYG
                     HIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTK
                     NMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDP
                     FTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPL
                     HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEK
                     ALQAMKAIPGTIRARLLY"
     gene            25604..25663
                     /gene="ibsC"
                     /locus_tag="RHX79_000027"
     CDS             25604..25663
                     /gene="ibsC"
                     /locus_tag="RHX79_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsC"
                     /protein_id="HDV2195252.1"
                     /translation="MMRLVIILIVLLLISFGAY"
     gene            25996..26055
                     /locus_tag="RHX79_000028"
     CDS             25996..26055
                     /locus_tag="RHX79_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HDV2195253.1"
                     /translation="MMRLAIILIVLLLISFPAY"
     gene            complement(26156..26758)
                     /locus_tag="RHX79_000029"
     CDS             complement(26156..26758)
                     /locus_tag="RHX79_000029"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDV2195254.1"
                     /translation="MTQLPELPLTLSRQEIRKMIRQRRRALTPEQQQEMGQQAATRMM
                     TYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQ
                     SELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQ
                     HYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW"
     gene            complement(26779..26962)
                     /gene="ssrS"
                     /locus_tag="RHX79_000030"
     ncRNA           complement(26779..26962)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="RHX79_000030"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(27004..27333)
                     /gene="zapA"
                     /locus_tag="RHX79_000031"
     CDS             complement(27004..27333)
                     /gene="zapA"
                     /locus_tag="RHX79_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HDV2195255.1"
                     /translation="MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKER
                     TRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITE
                     KTNQNFE"
     gene            27501..28079
                     /gene="ygfB"
                     /locus_tag="RHX79_000032"
     CDS             27501..28079
                     /gene="ygfB"
                     /locus_tag="RHX79_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YgfB"
                     /protein_id="HDV2195256.1"
                     /translation="MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDS
                     SWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRA
                     DALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEE
                     IIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH"
     gene            28105..29430
                     /gene="pepP"
                     /locus_tag="RHX79_000033"
     CDS             28105..29430
                     /gene="pepP"
                     /locus_tag="RHX79_000033"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HDV2195257.1"
                     /translation="MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPY
                     RQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEK
                     LGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYTYADEIVNSALEKLRKGSRQNLTAP
                     ATMIDWRPIVHEMRLFKSPEEIAVLRRAGEITALAHTRAMEKCRPGMFEYHLEGEIHH
                     EFNRHGARYPSYNTIVGSGENGCILHYTENECELRDGDLVLIDAGCEYKGYAGDITRT
                     FPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSMQEVTGEVVRIMVSGLVKLGILKG
                     DVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPD
                     AEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMAAARKQ"
     gene            29427..30605
                     /gene="ubiH"
                     /locus_tag="RHX79_000034"
                     /gene_synonym="visB"
     CDS             29427..30605
                     /gene="ubiH"
                     /locus_tag="RHX79_000034"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HDV2195258.1"
                     /translation="MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPG
                     FDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAAL
                     GQVVELHNVGQRLFALLRKAPGVMLHCPDRVANVARTQSHVEVTLESGEMLTGRVLIA
                     ADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDG
                     RCSLVWCHPLERREEVLSWSDEKFCRELQSAFGWRLGKITHAGKRSAYPLALTRAARA
                     ITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAHERGEDIGDYGILCRYQQ
                     RRQSDREATIGVTDSLVHLFANRWAPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR
                     "
     gene            30628..31830
                     /gene="ubiI"
                     /locus_tag="RHX79_000035"
                     /gene_synonym="visC"
     CDS             30628..31830
                     /gene="ubiI"
                     /locus_tag="RHX79_000035"
                     /gene_synonym="visC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent 2-octaprenylphenol hydroxylase"
                     /protein_id="HDV2195259.1"
                     /translation="MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADA
                     PPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYS
                     HLGHIVENSVIHYALWNKAQQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLV
                     IGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLS
                     DPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYA
                     RQFAAHRLVLVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRR
                     YERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGL
                     NDLPEWLR"
     gene            complement(31904..31987)
                     /locus_tag="RHX79_000036"
     CDS             complement(31904..31987)
                     /locus_tag="RHX79_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195260.1"
                     /translation="MSKNTKSKNNDIRKYNAKTEVKLVYFK"
     gene            32277..33371
                     /gene="gcvT"
                     /locus_tag="RHX79_000037"
     CDS             32277..33371
                     /gene="gcvT"
                     /locus_tag="RHX79_000037"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HDV2195261.1"
                     /translation="MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDA
                     GMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVY
                     YFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLF
                     NDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKP
                     CGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREH
                     GTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI
                     GETAIVQIRNREMPVKVTKPVFVRNGKAVA"
     gene            33395..33784
                     /gene="gcvH"
                     /locus_tag="RHX79_000038"
     CDS             33395..33784
                     /gene="gcvH"
                     /locus_tag="RHX79_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HDV2195262.1"
                     /translation="MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVD
                     LPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI
                     FKIKASDESELESLLDATAYEALLEDE"
     gene            33903..36776
                     /gene="gcvP"
                     /locus_tag="RHX79_000039"
     CDS             33903..36776
                     /gene="gcvP"
                     /locus_tag="RHX79_000039"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HDV2195263.1"
                     /translation="MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQ
                     IVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNM
                     LENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAM
                     AKRVSKLKNANRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQ
                     QVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVP
                     MGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNI
                     CTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLC
                     VEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEID
                     TLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIP
                     LGSCTMKLNAAAEMIPITWQEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVC
                     MQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVAC
                     DKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDG
                     ANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVV
                     QIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQD
                     AFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPVAGTLM
                     VEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQNELVAEWAHP
                     YSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ"
     gene            37042..37785
                     /locus_tag="RHX79_000040"
     CDS             37042..37785
                     /locus_tag="RHX79_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDV2195264.1"
                     /translation="MAIALVTGGSRGIGRATALLLAKEEYTVAVNYQQNLHAAQEVVN
                     LITQAGGKAFVLQADISDENQVIAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAE
                     RINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASK
                     GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQA
                     EEVAQAIVWLLSDKASYVTGSFIDLAGGK"
     gene            complement(37842..39275)
                     /gene="bglA"
                     /locus_tag="RHX79_000041"
     CDS             complement(37842..39275)
                     /gene="bglA"
                     /locus_tag="RHX79_000041"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase BglA"
                     /protein_id="HDV2195265.1"
                     /translation="MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHG
                     VPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEA
                     QPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAE
                     VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFV
                     ASALAVKAARRINPEMKVGCMLAMVPLYPYCCNPDDVMFAQESMRERYVFTDVQLRGY
                     YPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFE
                     GSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSIND
                     DYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDD
                     GTGDMSRSRKKSFNWYKEVIASNGEKL"
     gene            39320..39631
                     /locus_tag="RHX79_000042"
     CDS             39320..39631
                     /locus_tag="RHX79_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HDV2195266.1"
                     /translation="MQPNDITFFQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRF
                     EDDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELIKVIADIYPGQTQFYVIEFKC
                     L"
     gene            39795..40454
                     /locus_tag="RHX79_000043"
     CDS             39795..40454
                     /locus_tag="RHX79_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HDV2195267.1"
                     /translation="MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDL
                     NASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPF
                     LLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMA
                     VKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQ
                     A"
     gene            complement(40650..41630)
                     /gene="ygfZ"
                     /locus_tag="RHX79_000044"
     CDS             complement(40650..41630)
                     /gene="ygfZ"
                     /locus_tag="RHX79_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-modifying protein YgfZ"
                     /protein_id="HDV2195268.1"
                     /translation="MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQ
                     VTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYA
                     VFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAER
                     FLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQA
                     LGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRT
                     GTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE"
     gene            41873..42139
                     /gene="sdhE"
                     /locus_tag="RHX79_000045"
     CDS             41873..42139
                     /gene="sdhE"
                     /locus_tag="RHX79_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD assembly factor SdhE"
                     /protein_id="HDV2195269.1"
                     /translation="MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFI
                     RLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI"
     gene            42120..42527
                     /locus_tag="RHX79_000046"
     CDS             42120..42527
                     /locus_tag="RHX79_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin CptA"
                     /protein_id="HDV2195270.1"
                     /translation="MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMV
                     LLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSD
                     GGKRQHLWLAADSMDEAEWRDLRRILLQQETQR"
     gene            complement(42567..43088)
                     /gene="fldB"
                     /locus_tag="RHX79_000047"
     CDS             complement(42567..43088)
                     /gene="fldB"
                     /locus_tag="RHX79_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldB"
                     /protein_id="HDV2195271.1"
                     /translation="MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLME
                     QYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALG
                     MLHDKLLTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW
                     CEQILNEMAEHYA"
     gene            43200..44096
                     /gene="xerD"
                     /locus_tag="RHX79_000048"
     CDS             43200..44096
                     /gene="xerD"
                     /locus_tag="RHX79_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HDV2195272.1"
                     /translation="MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRG
                     LTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLAS
                     PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
                     SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQM
                     TRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTT
                     QIYTHVATERLRQLHQQHHPRA"
     gene            44121..44831
                     /gene="dsbC"
                     /locus_tag="RHX79_000049"
     CDS             44121..44831
                     /gene="dsbC"
                     /locus_tag="RHX79_000049"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HDV2195273.1"
                     /translation="MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPV
                     AGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGTAPVNVTNKMLLKQLNALEKEMIVYK
                     APQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIW
                     CAKDKNKAFDDVMAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVLSNGTLVPGYQP
                     PKEMKEFLDEHQKMTSGK"
     gene            44837..46570
                     /gene="recJ"
                     /locus_tag="RHX79_000050"
     CDS             44837..46570
                     /gene="recJ"
                     /locus_tag="RHX79_000050"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDV2195274.1"
                     /translation="MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERS
                     VKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSN
                     IDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTD
                     HHLPGETLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIA
                     IPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQ
                     KLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQ
                     GMQVEALTLCEKLERSRDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAG
                     DGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFELFQQRFG
                     ELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQ
                     QRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRS
                     LQIIIDNIWPI"
     gene            46661..47759
                     /gene="prfB"
                     /locus_tag="RHX79_000051"
     CDS             join(46661..46735,46737..47759)
                     /gene="prfB"
                     /locus_tag="RHX79_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311790.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDV2195275.1"
                     /translation="MFEINPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQP
                     DVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAE
                     LDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG
                     FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFS
                     SAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQN
                     DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DLRTGVETRNTQAVLDGSLDQFIEASLKAGL"
     gene            47769..49286
                     /gene="lysS"
                     /locus_tag="RHX79_000052"
     CDS             47769..49286
                     /gene="lysS"
                     /locus_tag="RHX79_000052"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDV2195276.1"
                     /translation="MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDH
                     TSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD
                     DLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
                     QDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGA
                     AARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT
                     MMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIK
                     KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITE
                     YPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAG
                     DDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK"
     gene            complement(49329..49877)
                     /gene="idi"
                     /locus_tag="RHX79_000053"
     CDS             complement(49329..49877)
                     /gene="idi"
                     /locus_tag="RHX79_000053"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HDV2195277.1"
                     /translation="MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKG
                     QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDF
                     RYRATDPNGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDATPWAFSP
                     WMVMQAANSEARKLLSAFAQHN"
     gene            49932..50003
                     /locus_tag="RHX79_000054"
     CDS             49932..50003
                     /locus_tag="RHX79_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195278.1"
                     /translation="MINQVSVYRQPPVLSGCRQVKTI"
     gene            complement(50000..50125)
                     /locus_tag="RHX79_000055"
     CDS             complement(50000..50125)
                     /locus_tag="RHX79_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195279.1"
                     /translation="MNFLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF"
     gene            complement(50127..51575)
                     /gene="uacT"
                     /locus_tag="RHX79_000056"
     CDS             complement(50127..51575)
                     /gene="uacT"
                     /locus_tag="RHX79_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417364.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate/proton symporter UacT"
                     /protein_id="HDV2195280.1"
                     /translation="MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAG
                     AVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFA
                     AVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGL
                     SIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFG
                     FLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFL
                     ALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVC
                     ISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYN
                     LYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHAD
                     LVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE"
     gene            52011..53930
                     /gene="ygfT"
                     /locus_tag="RHX79_000057"
     CDS             52011..53930
                     /gene="ygfT"
                     /locus_tag="RHX79_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417363.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent uric acid utilization protein
                     YgfT"
                     /protein_id="HDV2195281.1"
                     /translation="MNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHV
                     VGKGQAANPVACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVV
                     EMVDTIAQKCDLCNQRSSGTQACIEVCPTQALRLMDDKGLQWIKVARQRKTAAGKASS
                     DAQPSRSAALLPVNSRKGADKISASERKTHFGEIYCGLDPLQATYESDRCVYCAEKAN
                     CNWHCPLHNAIPDYIRLVQEGKIIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKD
                     HSGAVSIGNLERYITDTALAMGWRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGV
                     QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDL
                     TSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVE
                     GKRVVVLGGGDTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQF
                     NVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQ
                     AHAMPWLQGSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGR
                     QAARDMLTLFDTKAS"
     gene            53930..54418
                     /locus_tag="RHX79_000058"
     CDS             53930..54418
                     /locus_tag="RHX79_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDV2195282.1"
                     /translation="MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQ
                     RLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMIT
                     IQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGEN
                     PL"
     gene            complement(54454..55821)
                     /gene="ghxQ"
                     /locus_tag="RHX79_000059"
                     /gene_synonym="ygfQ"
     CDS             complement(54454..55821)
                     /gene="ghxQ"
                     /locus_tag="RHX79_000059"
                     /gene_synonym="ygfQ"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanine/hypoxanthine transporter GhxQ"
                     /protein_id="HDV2195283.1"
                     /translation="MSGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLA
                     MVYSVIVVPGMLGKAGFPPAAVFVATCLVAGFGSLLMGLWANLPMAIGCAISLTAFTA
                     FSLVLGQQISVPVALGAVFLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLL
                     LIAANGVGMVIKNPIEGLPVALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIA
                     ISIIGLIFDPAVKYHGLVAMPSLTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVF
                     DATGTIRAVAGQANLLDKDNQIINGGKALTSDSVSSIFSGLVGAAPAAVYIESAAGTA
                     AGGKTGLTATVVGALFLLILFLSPLSFLIPGYATAPALMYVGLLMLSNVSKLDFNDFI
                     DAMAGLVCAVFIVLTCNIVTGIMLGFVTLVVGRVFAREWQKLNIGTVIITAALVAFYA
                     GGWAI"
     gene            complement(55857..57173)
                     /gene="guaD"
                     /locus_tag="RHX79_000060"
     CDS             complement(55857..57173)
                     /gene="guaD"
                     /locus_tag="RHX79_000060"
                     /EC_number="3.5.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311783.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanine deaminase"
                     /protein_id="HDV2195284.1"
                     /translation="MSGEHTLKAVRGSFIDVTRTVDNPEEIASALRFIEDGLLLIKQG
                     KVEWFGEWEDGKHQIPDTIRVRDYRGKLIVPGFVDTHIHYPQSEMVGAYGEQLLEWLN
                     KHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASHINM
                     RMIAGKVMMDRNAPDYLLDTAESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQM
                     AMAQRLKEEYPDTWVHTHLCENKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHC
                     VHLEEKEWDRLSETKSSIAFCPTSNLYLGSGLFNLKKAWQKKVKVGMGTDIGAGTTFN
                     MLQTLNEAYKVLQLQGYRLSAYEAFYLATLGGAKSLGLDDLIGNFLPGKEADFVVMEP
                     TATPLQQLRYDNSVSLVDKLFVMMTLGDDRSIYRTYVDGRLVYERN"
     gene            complement(57191..58591)
                     /gene="xanQ"
                     /locus_tag="RHX79_000061"
     CDS             complement(57191..58591)
                     /gene="xanQ"
                     /locus_tag="RHX79_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417358.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine/proton symporter XanQ"
                     /protein_id="HDV2195285.1"
                     /translation="MSDINNAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVTPAL
                     IVGAALQLSAETTAYLVSMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIA
                     LGSSMKSDGFHEELIMSSLLGVSFVGAFLVVGSSFILPYLRRVITPTVSGIVVLMIGL
                     SLIKVGIIDFGGGFAAKSSGTFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGL
                     CVGYIASLCLGMVDFSSMRNLPLITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGD
                     ITATAMVSRRPIQGEEYQSRLKGGVLADGLVSVIASAVGSLPLTTFAQNNGVIQMTGV
                     ASRYVGRTIAVMLVILGLFPMIGGFFTTIPSAVLGGAMTLMFSMIAIAGIRIIITNGL
                     KRRETLIVATSLGLGLGVSYDPEIFKILPASIYVLVENPICAGGLTAILLNIILPGGY
                     RQENVLPGITSAEEMD"
     gene            complement(58756..61626)
                     /locus_tag="RHX79_000062"
     CDS             complement(58756..61626)
                     /locus_tag="RHX79_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase
                     Mo/Fe-S-binding subunit"
                     /protein_id="HDV2195286.1"
                     /translation="MIIHFTLNGAPQELTVNPGENVQKLLFNMGMHSVRNSDDGFGFA
                     GSDAIIFNGNIVNASLLIAAQLEKADIRTAESLGKWNELSLVQQAMVDVGVVQSGYND
                     PAAALIITDLLDRIAAPTREEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQATID
                     IAPTFRDDLEVIGKHYPKTDAAKMVQAKPCYVEDRVTADACVIKMLRSPHAHALITHL
                     DVSKAEALPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVV
                     AESEEIALEALKLIDVEYEVLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNS
                     HAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVIIERTYNSTQAQQCP
                     TETHICFTRMDGDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQD
                     ILLEEVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDF
                     RANTGPYGNHSLTVPCNGPALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNF
                     AITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEI
                     LRQGREMIQWSSPKPQNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSG
                     GADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARL
                     AAENLREKILFHGAQMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLV
                     GTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGAT
                     LRAIGHSMSEEIIYNAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSDDKVGPFGAKS
                     ISEIGVNGAAPAIATAIHDACGIWLREWHFTPEKILTALEKI"
     gene            complement(61623..62402)
                     /locus_tag="RHX79_000063"
     CDS             complement(61623..62402)
                     /locus_tag="RHX79_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase
                     FAD-binding subunit"
                     /protein_id="HDV2195287.1"
                     /translation="MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKK
                     IAISLQDLELDWVDWDNGALRIGAMSRLQPLRDARFIPAALREALGFVYSRHVRNQST
                     IGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRT
                     CATRKISRSQAGLTVVTAAVAMTDHDGMRIALDGVASKALRLHDVEKQNLEGNALEQA
                     VANAIFPQEDLRGSVAYKRYITGVLVADLYADCQQAGEEAV"
     gene            complement(62453..63781)
                     /gene="ssnA"
                     /locus_tag="RHX79_000064"
     CDS             complement(62453..63781)
                     /gene="ssnA"
                     /locus_tag="RHX79_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative aminohydrolase SsnA"
                     /protein_id="HDV2195288.1"
                     /translation="MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDA
                     SYKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEES
                     LYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRN
                     NGIKELQEGVEENIRFARQIDEAKKAATEPYLVEAHIGAHAPFTVPDAGLEMLREAVK
                     ATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDIALL
                     NQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGG
                     PLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIA
                     FGMGSGSVHSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA"
     gene            complement(63784..66882)
                     /gene="ygfK"
                     /locus_tag="RHX79_000065"
     CDS             complement(63784..66882)
                     /gene="ygfK"
                     /locus_tag="RHX79_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenate reductase subunit YgfK"
                     /protein_id="HDV2195289.1"
                     /translation="MGDIMRPIPFEELLTRIFDEYQQQRSIFGIPEQQFYSPVKGKTV
                     SVFGETCATPVGPAAGPHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAED
                     ECFNTEWSTEFTLLKAWDEYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQ
                     PSMQQFIDNMMDASDHPKFAQYRDTLNKLLQDDAFLARHGLQEKRESLQALPARIPTS
                     MVQGVTLSTMHGCPPHEIEAICRYMLEEKGLNTFVKLNPTLLGYARVREILDVCGFGY
                     IGLKEESFDHDLKLTQALEMLERLMALAKEKSLGFGVKLTNTLGTINNKGALPGEEMY
                     MSGRALFPLSINVAAVLSRAFDGKLPISYSGGASQLTIRDIFDTGIRPITMATDLLKP
                     GGYLRLSACMRELEGSDAWGLDHVDVERLNRLAADALTMEYTQKHWKPEERIEVAEDL
                     PLTDCYVAPCVTACAIKQDIPEYIRLLGEHRYADALELIYQHNALPAITGHICDHQCQ
                     YNCTRLDYDSALNIRELKKVALEKGWDEYKQRWHKPAGSGSRHPVAVIGAGPAGLAAG
                     YFLARAGHPVTLFEREANAGGVVKNIIPQFRIPAELIQHDIDFVAAHGVKFEYGCSPD
                     LTVEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALKLGKHVV
                     VVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFLNNP
                     ECFDADGTLTLRVMSLGEPDEKGRRRPVETNETVTLHVDSLITAIGEQQDTEALNAMG
                     VPLDKNGWPDVDHNGETRLTDVFMIGDVQRGPSSIVAAVGTARRATDAILSRENIRSH
                     QNNKYWNNVNPAEIYQRKGDISITLVNSDDRDAFVAQEAARCLECNYVCSKCVDVCPN
                     RANVSIAVPGFQNRFQTLHLDAYCNECGNCAQFCPWNGKPYKDKITVFSLSQDFDNSS
                     NPGFLVEDCRVRVRLNNQSWVLNIDSEGQFDNVPPELNDMCRIISHVHQHHHYLLGRV
                     EV"
     gene            complement(67204..67782)
                     /gene="mocA"
                     /locus_tag="RHX79_000066"
     CDS             complement(67204..67782)
                     /gene="mocA"
                     /locus_tag="RHX79_000066"
                     /EC_number="2.7.7.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor cytidylyltransferase"
                     /protein_id="HDV2195290.1"
                     /translation="MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCS
                     RIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDM
                     PTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMG
                     AHYSVEIENAEIILDIDTPDDFITAQKRYTKI"
     gene            67885..68655
                     /gene="yqeC"
                     /locus_tag="RHX79_000067"
     CDS             67885..68655
                     /gene="yqeC"
                     /locus_tag="RHX79_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417352.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium-dependent hydroxylase
                     accessory protein YqeC"
                     /protein_id="HDV2195291.1"
                     /translation="MKSIVDPSALFIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQA
                     SGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFT
                     PEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKV
                     STENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQC
                     ENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN"
     gene            68703..70328
                     /locus_tag="RHX79_000068"
     CDS             68703..70328
                     /locus_tag="RHX79_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF2563 family selenium-dependent molybdenum
                     hydroxylase system protein"
                     /protein_id="HDV2195292.1"
                     /translation="MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSI
                     VGTIGGGMVERKVIEESLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGM
                     RPRLVLIGAGHVNRAIAQSAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAV
                     EALDIRPDNFVLIATNNQDREALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEE
                     HIARLHAPVGYNIGAETPQEIAISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGA
                     GDIASGVALRLYHAGFKVIMLEVEKPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSA
                     EAMKLTERGFIPVMVDPACSLLDELKPLCVVDAILAKQNLGTRADMAPVTIALGPGFT
                     AGKDCHAVIETNRGHWLGQVIYSGCAQENTGVPGNIMGHTTRRVIRAPAAGIMRSNVK
                     LGDLVKEGDVIAWIGEHEIKAPLTGMVRGLLNDGLAVVGGFKIGDIDPRGETADFTSV
                     SDKARAIGGGVLEALMMLMHQGVKATKEVLEVA"
     gene            complement(70369..71301)
                     /gene="arcC"
                     /locus_tag="RHX79_000069"
     CDS             complement(70369..71301)
                     /gene="arcC"
                     /locus_tag="RHX79_000069"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HDV2195293.1"
                     /translation="MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIV
                     THGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNALREELLSRGI
                     NKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVV
                     ASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLA
                     EMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAA
                     ASFARSRAGREALITVLSKAKEGIEGKTGTVICQ"
     gene            complement(71349..72734)
                     /gene="hyuA"
                     /locus_tag="RHX79_000070"
     CDS             complement(71349..72734)
                     /gene="hyuA"
                     /locus_tag="RHX79_000070"
                     /EC_number="3.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311773.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-phenylhydantoinase"
                     /protein_id="HDV2195294.1"
                     /translation="MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEI
                     DATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCR
                     LRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKL
                     NDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAE
                     AIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYD
                     TEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCP
                     NGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVV
                     IIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRF
                     LRRKPFVPPVL"
     gene            complement(72787..73998)
                     /locus_tag="RHX79_000071"
     CDS             complement(72787..73998)
                     /locus_tag="RHX79_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgeY family selenium metabolism-linked
                     hydrolase"
                     /protein_id="HDV2195295.1"
                     /translation="MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHR
                     IKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGME
                     TDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYII
                     EQSGIRPEFVVSTEPTDCQIYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPIL
                     GELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGAL
                     DEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEG
                     LFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMY
                     AAIPLSWLATE"
     gene            complement(74056..75252)
                     /gene="dpaL"
                     /locus_tag="RHX79_000072"
     CDS             complement(74056..75252)
                     /gene="dpaL"
                     /locus_tag="RHX79_000072"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HDV2195296.1"
                     /translation="MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRP
                     TPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSF
                     EHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAE
                     CIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMR
                     EMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIV
                     NVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRI
                     ISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEG
                     KHAVAP"
     gene            complement(75310..76497)
                     /gene="ygeW"
                     /locus_tag="RHX79_000073"
     CDS             complement(75310..76497)
                     /gene="ygeW"
                     /locus_tag="RHX79_000073"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311770.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="knotted carbamoyltransferase YgeW"
                     /protein_id="HDV2195297.1"
                     /translation="MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAAL
                     KALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGE
                     TVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQC
                     DIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFG
                     MDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKV
                     MEQRTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADI
                     SGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQE
                     RVK"
     gene            76976..78754
                     /locus_tag="RHX79_000074"
     CDS             76976..78754
                     /locus_tag="RHX79_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HDV2195298.1"
                     /translation="MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAG
                     TGAYGKFLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTP
                     VILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLLEDQGPGDNISK
                     IFATMIDNMDQGVLVVDDESRVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFESNFTH
                     GHMQHIVSWDDKSELIIGQLHNIQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGEC
                     RVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPE
                     QLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAR
                     EILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQED
                     IELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGE
                     VIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQMIREALSRHNSK
                     KQVADELGIGIATLYRKIKKYELLNT"
     gene            complement(78794..79273)
                     /gene="xdhC"
                     /locus_tag="RHX79_000075"
     CDS             complement(78794..79273)
                     /gene="xdhC"
                     /locus_tag="RHX79_000075"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase iron sulfur-binding
                     subunit XdhC"
                     /protein_id="HDV2195299.1"
                     /translation="MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGC
                     CVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQ
                     CGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVQDCEKTK"
     gene            complement(79270..80148)
                     /gene="xdhB"
                     /locus_tag="RHX79_000076"
     CDS             complement(79270..80148)
                     /gene="xdhB"
                     /locus_tag="RHX79_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase FAD-binding subunit XdhB"
                     /protein_id="HDV2195300.1"
                     /translation="MFDFASYHRAATLADAINLLADNPQAKLLAGGTDVLIQLHHHND
                     RYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAATSIAG
                     PQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSL
                     EHDEILVAFHFPPQPKEHAGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFG
                     VAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPRSSWRASKEFRLHLIQTMT
                     KKVISEAVAAAGGKLQ"
     gene            complement(80159..82456)
                     /gene="xdhA"
                     /locus_tag="RHX79_000077"
     CDS             complement(80159..82456)
                     /gene="xdhA"
                     /locus_tag="RHX79_000077"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdenum-binding
                     subunit XdhA"
                     /protein_id="HDV2195301.1"
                     /translation="MEAREATATGESCMRVDAIAKVTGRARYTDDYVMAGMCYAKYVR
                     SPIAHGYAVSINDEQARGLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALL
                     TRHIRHHGDAVAIVVARDELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGN
                     LLKQSTMSTGNVQQTIDAADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSST
                     QIPHIVRRVVGQALDIPWSCVRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKV
                     SLSREECFLATRTRHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGN
                     KVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEI
                     RLRNAAREGDANPLTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQQGNLRRGVGVA
                     CFSYTSNTWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVS
                     DVRVISTQDTDVTPFDPGAFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNL
                     TLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTNPPAFGCTFVD
                     LTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGV
                     VRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMA
                     TGVAINTLPLTPKRLYEEFHLAGLI"
     gene            82871..83626
                     /locus_tag="RHX79_000078"
     CDS             82871..83626
                     /locus_tag="RHX79_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311765.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDV2195302.1"
                     /translation="MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTV
                     KRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGAKSSSSTRKSTAKSTT
                     KSASVTPSSAVPKSSWPPVGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYA
                     AGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGST
                     DAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC"
     gene            83705..83778
                     /locus_tag="RHX79_000079"
     tRNA            83705..83778
                     /locus_tag="RHX79_000079"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:83737..83739,aa:Gly,seq:ccc)
     gene            84012..85622
                     /locus_tag="RHX79_000080"
     CDS             84012..85622
                     /locus_tag="RHX79_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001613747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195303.1"
                     /translation="MKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATD
                     KSYLSLNPDKYPNYRLLIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGT
                     FILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPD
                     QIKRMQDVISNPKRLDGVPGQMNVVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGL
                     YLDLLIQAIDTDTINAEDWQKGDRLKSVALLIAYLDKANFYVMEDSGAWEEDARLNTS
                     SVALVTSGLERLSNLLSKKDSVFVSDLLREAKANELDEPLSTTRLNHLIDKGYERITL
                     QLDLGGESPGYLEKDKHYREADAALLNVIYPANLAKINTRRKEQVLKIVKKLAGPYGI
                     KRYEKDNYQSANFWFNDIKTDTDQNSHAKREKSFIPSTEAEWFFDSWYAKSAAIVYKE
                     SRKEEYLNDSVQFMNRSLAQITGENMIGANGRSVPEMALPESYNYIHKSGTLHEAPSP
                     IIPLNWSKASMTLMLKEMSNLINDEGIK"
     gene            85635..85754
                     /locus_tag="RHX79_000081"
                     /pseudo
     CDS             85635..85754
                     /locus_tag="RHX79_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314987.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion protein"
     gene            85754..86119
                     /locus_tag="RHX79_000082"
     CDS             85754..86119
                     /locus_tag="RHX79_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000467436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195304.1"
                     /translation="MFGLRKVNRNTHTFETTFQNWKENGEDVALLMPEFSAKWLPIAE
                     ESGSWSGWVLLGEIFPLISSELAGMALMPETERLIGEWLSLSSSPLNLKHPELKYNRL
                     HVGKVFDGVLSPAQPLIRI"
BASE COUNT        21070 a        21298 c        22769 g        21082 t
ORIGIN      
        1 ttccctgctc aattgctttc attaaaccgc acgagtattt tatttttacc gcctgacggt
       61 accctaaaaa taaaataagg ataatttatg cggcttagtg attattttcc agaatcatca
      121 atctcagtta tacattcagc aaaagattgg caggaagcta tcgatttctc gatggtatca
      181 ttgctggata aaaactatat cagcgagaat tacattcagg caattaaaga ttccaccatt
      241 aacaatggcc cttattatat tctcgcacca ggcgtggcaa tgcctcatgc gcgaccggaa
      301 tgtggggcgc ttaaaaccgg gatgtctttg acattacttg aacaaggtgt ttattttccg
      361 gggaatgacg aaccaattaa attactcatc ggactctctg ctgccgatgc cgattcgcac
      421 attggcgcta ttcaggcgtt aagtgaatta ctgtgcgaag aagaaatact cgaacaactc
      481 ttaacagcat catcagaaaa acaattagcg gacattatca gccgcggata attactctct
      541 cctctacagg ataatattat ggaaaacaag tctgctcgtg caaaggtcca ggcttttggg
      601 ggctttttga ctgcaatggt catccccaat attggtgctt ttattgcctg gggcttcata
      661 actgcgttat ttattcccac cggttggctg ccgaatgaac atttcgccaa aattgtcggc
      721 ccgatgatta cctatttatt gcccgtgatg attggttcta ctggtggtca tctggtcggc
      781 ggtaaacgcg gggcggtcat gggcggaata ggtactattg gtgtgatcgt tggcgcagag
      841 atcccgatgt tccttggctc aatgatcatg gggccgctcg gtgggttggt cataaaatat
      901 gtcgataagg cactggaaaa acgcatacct gccggttttg agatggttat caataacttc
      961 tcattaggta tcgcggggat gctcctttgt ctgctgggtt ttgaagtgat cggcccggcg
     1021 gtgttaattg ccaatacttt cgtcaaagag tgtatcgagg cgctggtaca tgcgggttat
     1081 ctgcctctgc tgtcagtcat caatgaaccg gcgaaagtgc ttttccttaa taatgcgatc
     1141 gatcagggcg tctattatcc gctgggaatg caacaggctt cggttaacgg taaatccatc
     1201 ttctttatgg tggcctctaa cccaggtccg ggcctggggc tgctgctggc gtttaccttg
     1261 tttggtaaag ggatgagtaa acgttctgcg cccggggcga tgattattca cttcctcggt
     1321 gggatccacg aactgtattt cccatatgtg ctgatgaagc cgctgactat tattgccatg
     1381 attgcgggcg gtatgtctgg tacctggatg tttaacttac tggacggtgg tctggtggct
     1441 ggcccaagtc cggggtctat ctttgcttac ctggcactga cgccgaaagg ctcgttcctg
     1501 gcgacaattg ccggtgttac ggtaggtacc ctggtgtcct ttgctattac ttcgctgata
     1561 ctgaagatgg aaaaaacggt ggaaacggag agcgaagata agtttgctca gtcagccaat
     1621 gcggttaagg cgatgaaaca agagggtgca ttctcgttaa gcagggttaa gcgtatcgcc
     1681 tttgtttgcg atgcggggat gggctccagt gcgatgggcg cgaccacctt ccgtaaacgc
     1741 ctggaaaaag cggggctggc aatagaagta aaacattacg cgatagaaaa cgtgcctgcg
     1801 gatgccgata tcgtcgtcac tcacgccagt ctggaagggc gcgtgaaacg tgtgacggat
     1861 aaaccgctga tattgattaa taactatatt ggcgatccaa aactcgacac tttatttaat
     1921 caattaaccg ccgaacataa acactgatta cagaggtaaa aatgaaaacc aaagttgctg
     1981 ctatttatgg caagcgggat gtccgtctgc gcgaatttga actgccagaa attaccgata
     2041 atgaactgtt agtgagtgta atttctgaca gcgtctgttt atcgacctgg aaagcggcgt
     2101 tactcggtag tgaacataaa cgcgtacccg acgatttaga aaatcatccg gtcattaccg
     2161 ggcatgaatg tgccggggtt attgtcgaag tgggtaaaaa tctcactggc aaatataaaa
     2221 aaggccagcg ttttgtattg caaccggcga tggggttacc aagcggatat tcagcaggct
     2281 acagctacga atattttggc ggtaacgcca cctatatgat tattcccgaa atcgccatta
     2341 atttgggctg cgtattaccg tatcacggct cttattttgc tgcggcgtcg ctggcagagc
     2401 ctatgtgctg cattattggt gcttatcatg ccaattatca caccacgcaa tatgtttatg
     2461 agcatcgcat gggcgtcaaa cctggcggca atattgcact gctggcgtgt gcgggtccga
     2521 tgggcattgg cgctatcgat tacgccatta acggtggcat acaaccgtca cgggtggtgg
     2581 tggtcgatat cgacgacaaa cgcctggcgc aggtgcagaa gctgctgccg gtggatctgg
     2641 cggccagtaa aggcattgag ctggtgtatg tgaataccaa agggatgagc gatccggtcc
     2701 agacgctgcg ggcgctgaca ggagatgtcg ggttcgatga catttttgtt tatgcggcgg
     2761 tgcctgctgt cgttgagatg gctgacgaat tactggcgga agatggctgt ctgaacttct
     2821 ttgccgggcc gacggataaa aacttcaaag tgccgtttaa tttctacaac gtccattaca
     2881 acagcacgca cgtcgtcggt acatccggcg gttcaacgga cgacatgaaa gaggcgattg
     2941 cgttaagcgc cacggggcag ttgcagccgt cctttatggt cacgcatatc ggtgggctgg
     3001 atgcggtgcc agataccgtg ctcaatctgc cggatatccc tggcggtaaa aaactcattt
     3061 ataacggcgt gaccatgccg ctcaccgcca ttgccgattt tgccgaaaaa ggcaaaaccg
     3121 atccgctgtt taaagagctg gcgcggctgg ttgaggaaac gcacggcatc tggaatgagc
     3181 aggccgagaa atatctgctg gcgcaatttg gcgttgatat tggggaggcc gcgcaatgat
     3241 gtccctggcg tggccattat ttcgcgttac ggaacaggca gcgttggctg cctggccgca
     3301 aaccggatgt ggcgacaaaa ataaaattga tggcctggcg gtcaccgcga tgcgccaggc
     3361 attaaacgac gtcgcttttc gtggacgagt ggttatcggc gaaggagaaa ttgaccatgc
     3421 gccgatgctg tggattggcg aagaggtggg caaaggcgat gggccagaag tcgatatcgc
     3481 ggttgacccg attgaaggca cgcggatggt agcgatgggg cagagcaatg cgctggcggt
     3541 catggctttc gcccctcgag atagcctgtt acatgcgccc gatatgtata tgaaaaagct
     3601 ggttgttaat cgactggctg ccggggcgat tgatctgtct ttgcctctgg cggacaactt
     3661 gcgcaacgtg gcgcgggcgt taggcaaacc gctggacaag ctgcgcatgg ttacgctgga
     3721 taaaccgcgc ctgagtgccg cgattgaaga agcaacacag ctgggcgtga aggttttcgc
     3781 tctgccggat ggcgatgtcg ccgccagcgt gctgacctgc tggcaggata atccttacga
     3841 cgtgatgtac accatcggcg gtgcgccaga aggcgtgatt tctgcctgtg ccgttaaagc
     3901 attaggtggg gatatgcagg ccgagctgat tgacttttgt caggctaaag gggattacac
     3961 ggaaaatcgg cagattgcag agcaggagcg caagcgttgt aaggcaatgg gcgttgacgt
     4021 taaccgtgtg tactcgctcg atgaactggt gagggggaac gatatcctct ttagcgctac
     4081 gggcgtgacg ggcggcgagt tggtgaacgg tatccaacag acggcgaatg gggtgcggac
     4141 gcagacatta ctgatcggcg gcgcggacca aacgtgtaat ataatagact ccctgcattg
     4201 atggtgatct atcggaagac caatggcgac gctgacagaa gatgatgtgc ttgagcaact
     4261 ggatgcacag gacaatttat tttcatttat gaaaactgcg cattctattt tgctccaggg
     4321 gatacgccag tttctgccgt cgctgtttgt cgataacgat gaagagatcg tcgaatatgc
     4381 agtgaagccg ttactcgccc aaagcggccc gcttgacgat attgatgttg cgctgcgttt
     4441 gatttatgcg ctggggaaaa tggataaatg gctgtatgcc gatatcacgc acttttccca
     4501 gtactggcat tacctgaacg aacaggatga aacgcccgga tttgccgatg acatgacctg
     4561 ggattttatc agcaacgtca atagcataac ctgcaatgcg acgctctatg acgcgttaaa
     4621 agcgatgaag ttcgccgatt tcgccgtctg gtcagaggcg cgttttagcg gaatggtcaa
     4681 aacggcgctg acgctggcag taacgaccac cttaaaggaa ttaacgccgt gaaaattgaa
     4741 ttaacggtga atgggctgaa cgtgcaagcg cagtaccatg atgaagagat agaacgcgtg
     4801 cataaaccgt tgctgcgtat gctggcggcc ttacagacgg taagtccgca gcgacgtacg
     4861 gtggtttttc tttgcgctcc gccggggacg ggtaaatcta ccttaactac cttctgggaa
     4921 tatctcgcgc aacaagaccc tgaattaccc gctatccaga cgctcccgat ggatggtttt
     4981 caccattaca atagctggct ggatgcgcat caattgcgcc ccttcaaagg cgcaccagag
     5041 acatttgacg ttgcgaaact ggcggaaaat ctgtgccagg tagtggaagg ggattgtacg
     5101 tggccgcagt atgatcgaca aaagcatgat cctgttgaag atgcgttgca cgttaccgca
     5161 ccactcgtca tcgtcgaagg aaactggttg ttgctggacg acgagaagtg gtgccagctt
     5221 gcgcaatttt gtgatttctc gatctttatc aacgcgccag ctactgcgtt gcgggaacga
     5281 ctggtagggc gcaagctggc gggaggggta tcgctggcag acgcagaagc tttttatgac
     5341 cgtaccgacg ggccgaatgt tcgccgggtg ctggaagaga gtctgcctgc aaatttgacc
     5401 ttaatgatga ccgctacggg tgaatatcgt ctggtggatt aacgttcctg attagaccat
     5461 cttccagtcg caccacacga gagaaatgac gccgggtaaa tgcggcgtca tgactgattg
     5521 ctacgacgct cgtgcctcgc tggccgcact tctccagcca gctttcaaac acgctcaacc
     5581 aattttcgtc aaaatcccga ctcggctcgt ccagcagcaa tagtggcgga gagagtgctt
     5641 ccaggcaggc gacggcgacc atccgtcgct gcgcactatg cagatccaac gggtgcgagt
     5701 tggcagtgtc tgctaactga caacattgca gggcagcatg ggtacgttga gtgatttcat
     5761 ccgccgggca tttttgcagt ttcaaaccaa atgcgatctc gtcagcgacg gtgctgtgaa
     5821 aaagttggtt ttccgcttcc tgaaacagta cgccaacctt tgccgcgcgc tggcggtttt
     5881 tcaggttttt catcgcctgt tgttgcagca taaccgtacc ggctgtgggc gtaagaagac
     5941 ctgccattac tcgtaacagc gtcgattttc ccgcgccatt gtcgccggtc agcgccaacc
     6001 attcaccttg tttgagttgc agagaaatgt cgcaaagaca atccgttgcc gcgccaggcc
     6061 agcgataaga tatcttattt aacgttaaca tagtggctgg agcgctccgt tttgcaattg
     6121 ccacgcttgc tggcagtagt tcaggaaagg tgtgcgatga cgttcaaaaa gaataatcag
     6181 cgaaccacgt tcaaacgccc agtgttgtaa gcgctgcaac agcatttcgc tggcctgcgg
     6241 agtcaggcgg ctaaaggctt catcaagaat taagagcttt ggctgcatcg cgatggcgca
     6301 ggcgatgacc acgcgctgtg tctctccacc ggagagtgtt gccgggtgac gatggcgcaa
     6361 cggctggcac tcggtcagag tcagggcggc atcaatccgc gccataatct ctgcttcagc
     6421 aagacacaga ttttctggcc caaaggcaac ttcttcttcc acgctaaagg tacagccgga
     6481 gagctgcaaa tagggcgatt gctggacgag ctggatggtg gcggattgtt cattaagcgg
     6541 gagatgccca atgggcgtac cgaggagcgt ccccgtgcct gttatctctc ctggcagaaa
     6601 gtccggatac cagcccgcca tcagctgtgc cagcgtactt ttgccactgc cgttgtcacc
     6661 aaagatggcg accatccccg gtttgacata gtgaaagtca taacagaacg gaggatgcgt
     6721 tgagtgtgtc gggcaataac ggaactgttc taacgtaacc atatccacgc tccgaattct
     6781 gtcagcatca gcaagatcat ggtgtaacgc gctacgcgtt gtagggtgct atcggctggt
     6841 gcccacaacg ttgttcgtcg gttgtggatc cgaaatgccc gcatatccag cgccgcacca
     6901 cggatagcca gatcgtttag cgcattgtgt gttagcggaa taattaacgc gggcatcgca
     6961 cgtaaacgct gataccagcc ctcatccagc ggcacgccac gggcacgctg cgcttcatga
     7021 ataatcgcta attgccgttt taactgctca acgaccaata acggcccggc aaacagataa
     7081 gcgacgcctg gcggcaggcg agaagcaaac agagcgcgaa taaaacattg cacggggacg
     7141 tactgcatcc acaactgtga ggttgaaaca atcgccagaa tccgcaacca gagcgtaata
     7201 gcatgcgacc accgttctgg cgagcgtggc gtgccgctta gccattctgg tagccagcca
     7261 ccgtgtacca gccacagccc ggcgcccagc gagaacatca gccagacgac atattttgcc
     7321 cgccgtcgcg tggcctttag cgcaataagg cagaaaaagg tcgccgcgct atagatcggc
     7381 aaaatggtct gcgcgggcag gataagcgtg gtgcaggccg ccaatgccca cagtgttaat
     7441 gaggtaaatg gatgcattta gcgcacggca gccattgccg gaaaatggcg cgtggtgcga
     7501 atcggcagct ggcgcagtaa aagccagaca atcaccgctg taagaatttt atcgaccagg
     7561 ttcgcgccta tcaccgtaat cgccaccgac tccaccaggt tttgccccat cgagtgcatc
     7621 caggcaacga acaaatcggc tccgctaccg gtgacaccgc cgaacagcgc agtacgcagc
     7681 ggtacagcga cgaccgttac cgcaagcgta ataatcacgc cgctgacaac gacttttggc
     7741 agggtgcgaa accaacccgc tcgcgccagc caaccggcga ccaggccgat gaccatcgcg
     7801 acgggtgcaa atgcggcggc gatcgggtcg gtcagcaatc cccagagtaa attggtcagt
     7861 aagccggtca gcattccgat caccggacca agcagtaccg cgctaataag tgtgccgatg
     7921 gagtcgagaa atataggtaa tttgaccatg ctggccagtt gcccgccgat catattgatg
     7981 gcgatagata taacgatcaa caccagtgcc tgactggaaa agtggctacg cgccataaga
     8041 aaacctcttt gaaagtagtt atttaacggg ggaaatatgc aactcgtcgt aaccagaaag
     8101 cgcgcaaggt tggcggctaa acgccagttc ctcaaggcta ccgatcacta gttcaagcgt
     8161 ggtccgcacg gtacagccgg gcatcatatg accgccaagc atcgtgccgt gtggatcgga
     8221 aacgcagaga tgaagatgct caccactcag ttccagcgtg ccgtttagtg agatcacttc
     8281 gaatgtaccg ttcaggagcg tggtgccttc ttgcccggca tagcgcaagg cgacgtcagt
     8341 caggctaccg gtacagcctg caatccaggc ggcatgaagt tgatgctgct gtgcaaaagc
     8401 gtgtagctgg gaaaaaactt cctgcccggg gaggaggcgc agtgcgtaaa agcgtgcgga
     8461 ggaagaatat gggtagggca atgtcatcat tggagtactc cgaaactcgg acgtattgcg
     8521 gataatatcg acgctgcatc agtcatattc tgatataagt cagggtttgt gacggcacaa
     8581 cgaaaagatt ttgctacgct tattcgtgat tctgcaaagt ggaataaatt ccacaggggc
     8641 ggggctgaaa acgtgacgta agtcagataa ttgctttctt tgactggaca atcattcctt
     8701 ttattccacg tttcgcttat cctagctgaa gcgtttcagt cgattaaatg ttcgacaatt
     8761 aaccaatcag tcgcagtttg cgacaggtaa ggtttccccg gacgatttgc tggattactc
     8821 tgtctggcaa atttgctcag ggaaaacctt gcaggagatc tatgaccgta cgcgtagcga
     8881 taaatggctt cggtcgcatc gggcgtaatg tggttcgtgc tttgtatgaa tccggacgcc
     8941 gggcggaaat taccgtggtg gcaatcaacg aactggcgga tgctgcgggc atggcgcatt
     9001 tgttgaaata tgacaccagc catggccgtt ttgcatggga agtacgacag gaacgcgatc
     9061 aactttttgt tggtgatgac gccatccgcg tattgcatga acgttcactg caatcgctcc
     9121 cctggcgtga acttggcgtt gatgtagtcc tcgactgcac cggcgtatat ggctcccgcg
     9181 agcatggcga agcgcatatt gccgccgggg ccaaaaaagt gctcttttca catcctggca
     9241 gtaacgatct cgacgcgacc gttgtttacg gcgtcaatca ggatcaactt cgtgcggaac
     9301 accgcatcgt ttctaacgct tcctgtacca cgaattgcat aattcccgtc atcaaattgt
     9361 tagatgatgc gtacggtatt gagtccggca ctgtgaccac aattcactcc gccatgcacg
     9421 atcaacaggt tattgatgca taccatcctg acctgcgtcg cacccgggca gccagccagt
     9481 cgatcattcc ggtcgatact aaactggccg ccggtatcac acgatttttt ccgcaattta
     9541 acgatcgctt tgaagcgatt gcggtacgtg tgccaaccat aaatgtgacg gcaatcgatt
     9601 taagcgtgac ggtgaagaaa cctgtaaaag ccaatgaagt caacctgttg ctgcaaaaag
     9661 cagcacaagg tgcatttcat ggtatagttg actatacgga attgccgttg gtctctgtag
     9721 attttaacca cgatccgcac agtgccattg tcgatggcac ccaaacccgg gtcagtggcg
     9781 cacacctgat caaaacgttg gtctggtgcg ataacgaatg gggctttgct aaccgaatgc
     9841 tcgacacgac gttagctatg gctactgttg ctttcaggta agacgcaagc agcgtctgca
     9901 aaacttttag aatcaacgag aggattcacc atgtctgtaa ttaagatgac cgatctggat
     9961 cttgctggga aacgtgtatt tatccgagcg gatctgaacg taccagtaaa agacgggaaa
    10021 gtaaccagcg acgcgcgtat ccgtgcttct ctgccgacca tcgaactggc cctgaaacaa
    10081 ggcgcaaaag tgatggtaac ttcccacctg ggtcgtccta ccgaaggcga gtacaacgaa
    10141 gaattctctc tgctgccggt tgttaactac ctgaaagaca aactgtctaa cccggttcgt
    10201 ctggttaaag attacctcga cggcgttgac gttgctgaag gtgaactggt tgttctggaa
    10261 aacgttcgct tcaacaaagg cgagaagaaa gacgacgaaa ccctgtccaa aaaatacgct
    10321 gcactgtgtg acgtgttcgt aatggacgca ttcggtactg ctcaccgcgc gcaggcttct
    10381 actcacggta tcggtaaatt cgctgacgtt gcgtgcgcag gcccgctgct ggcagctgaa
    10441 ctggacgcgc tgggtaaagc actgaaagaa cctgctcgcc cgatggtggc tatcgttggt
    10501 ggttctaaag tatctaccaa actgaccgtt ctggactccc tgtctaaaat cgctgaccag
    10561 ctgattgttg gtggtggtat cgctaacacc tttatcgcgg cacaaggcca cgatgtgggt
    10621 aaatccctgt acgaagctga cctggttgac gaagctaaac gtctgctgac cacctgcaac
    10681 atcccggttc cgtctgatgt tcgcgtagca accgagttct ctgaaactgc accggctacc
    10741 ctgaaatctg ttaacgatgt gaaagctgac gagcagatcc tggatatcgg tgatgcttcc
    10801 gctcaggaac tggctgaaat cctgaagaat gcgaaaacca ttctgtggaa cggtccggtt
    10861 ggcgtgttcg aattcccgaa cttccgcaaa ggtactgaaa tcgtggctaa cgctatcgca
    10921 gacagcgaag cgttctccat cgctggcggc ggcgacactc tggcagcaat cgacctgttc
    10981 ggcattgctg acaaaatctc ctacatctcc actggcggcg gcgcattcct cgaattcgtg
    11041 gaaggtaaag tactgcctgc agtagcgatg ctcgaagagc gcgctaagaa gtaaaaaatc
    11101 acagggcagg gaaacctgcc cttgtttcag cgcgctttta gagcacgcat tttttcatac
    11161 tctaaataat tcgagttgca ggaaggcgac aagagagtga atccccagga gcttacataa
    11221 gtaagtgact ggggtgagcg aacgcagacg cagcacatgc aacttgaagt atgatgagta
    11281 taaggcccga cgatacagga caagagacat gtctaagatt tttgatttcg taaaacctgg
    11341 cgtaatcact ggtgatgacg tacagaaagt tttccaggta gcaaaagaaa acaacttcgc
    11401 actgccagca gtaaactgcg tcggtactga ctccatcaac gccgtactgg aaactgctgc
    11461 taaagttaaa gcgccggtta tcgttcagtt ctccaacggt ggtgcttcct ttatcgctgg
    11521 taaaggcgtg aaatctgacg ttccgcaggg tgctgctatc ctgggcgcga tctctggtgc
    11581 gcatcacgtt caccagatgg ctgaacatta tggtgttccg gttatcctgc acactgacca
    11641 ctgcgcgaag aaactgctgc cgtggatcga cggtctgctg gacgcgggtg aaaaacactt
    11701 cgcagctacc ggcaagccgc tgttctcttc tcacatgatc gacctgtctg aagaatctct
    11761 gcaagagaac atcgaaatct gctctaaata cctggagcgt atgtccaaaa tcggcatgac
    11821 tctggaaatc gaactgggtt gcaccggtgg tgaagaagac ggcgtggaca acagccacat
    11881 ggacgcttct gcactgtaca cccagccgga agacgttgat tacgcataca ccgaactgag
    11941 caaaatcagc ccgcgtttca ccatcgcagc gtccttcggt aacgtacacg gtgtttacaa
    12001 gccgggtaac gtggttctga ctccgaccat cctgcgtgat tctcaggaat atgtttccaa
    12061 gaaacacaac ctgccgcaca acagcctgaa cttcgtattc cacggtggtt ccggttctac
    12121 tgctcaggaa atcaaagact ccgtaagcta cggcgtagta aaaatgaaca tcgataccga
    12181 tacccaatgg gcaacctggg aaggcgttct gaactactac aaagcgaacg aagcttatct
    12241 gcagggtcag ctgggtaacc cgaaaggcga agatcagccg aacaagaaat actacgatcc
    12301 gcgcgtatgg ctgcgtgccg gtcagacttc gatgatcgct cgtctggaaa aagcattcca
    12361 ggaactgaac gcgatcgacg ttctgtaaga tattcctttc tgcttatctc aaggcccgct
    12421 ctgcgggtct ttttttcgcc aaaagcaaaa ttgcctgatg cgctacgctt atcaggccta
    12481 cacgtatcct gcaatatatt gaatttgcag gtttttgtag gccggataag gcgttcacgc
    12541 cgcatccggc gtgacaaagc gcacattgat atctgtctga gccccgctct gcggggattt
    12601 tttcgccaaa agcaaggtga ttcagatgag aaatctgtga tctatttggc aaaattatgc
    12661 tttattgttt acccttgtca gactgcccgt cataaggcgg cggagtgtat ttctccattt
    12721 tgagtcagtt gaaaaggaat attgaatgga agatttgaat gttgtcgata gcataaacgg
    12781 cgcgggaagc tggctggtag ctaaccaggc gctgctgcta agttatgcag taaacatcgt
    12841 ggcagcactc gcgatcatca tcgttggttt gattatcgcg cggatgattt ccaacgcggt
    12901 gaatcgcctg atgatctccc gtaaaatcga tgccactgtt gctgattttc tttctgcatt
    12961 agtccgttac ggtattatcg cctttacgct aatcgctgcc ctgggacgcg tgggtgtaca
    13021 aacagcgtca gtcattgctg tactcggtgc cgcaggctta gctgttggtc tggctttgca
    13081 ggggtcactt tctaacctgg ccgctggcgt gttacttgtc atgttccgcc cgttccgtgc
    13141 cggagaatat gttgacctcg gcggcgtagc cggtactgtg ctgagtgtgc agattttctc
    13201 caccaccatg cgtactgcag acggtaaaat tatcgttatt ccgaacggta aaattattgc
    13261 cggaaatatt attaacttct cccgcgagcc agttcgccgt aacgaattta ttattggcgt
    13321 ggcgtatgat tccgatatcg atcaggttaa gcagatcctg accaatatta tccagtctga
    13381 agatcgcatt ttgaaagatc gcgaaatgac tgtgcgcctg aacgaacttg gtgcatcgtc
    13441 gattaatttc gtggtccgcg tctggagcaa cagcggcgat ctgcaaaacg tgtactggga
    13501 tgtgctggag cgtattaaac gtgaatttga tgccgccggt atcagcttcc cgtacccgca
    13561 aatggatgtg aactttaagc gggtgaaaga agacaaagct gcgtaatcaa cgctgaggcc
    13621 agataatact ctctggcctc tctcttatta gttattctga ttgctaatta atattatcaa
    13681 tttccgctaa taacaatccc gcgatatagt ctctgcatca gatacttaat tcggaatatc
    13741 caacgtgttt tcttattact ttcaaggtct tgctcttggg gcagctatga ttctgccgct
    13801 cggcccacaa aatgcttttg tgatgaatca gggcattcgt cgtcagtacc acattatgat
    13861 tgccttactt tgcgctatca gcgatttggt cctgatttgc gcggggattt ttggtggtag
    13921 cgcgttattg atgcagtcgc cgtggttgct ggcgctggtc acctggggcg gcgtagtctt
    13981 cttgctgtgg tatggttttg gcgcttttaa aacagcgatg agtagtaata ttgagttagc
    14041 tagtgccgaa gtcctgaagc aaggcagatg gaaaattatc gccaccatgt tggcagtgac
    14101 ctggctgaat ccgcatgttt acctggatac ttttgttgta ctgggcagcc ttggcgggca
    14161 gcttgacgtc gaaccaaaac gttggtttgc gctcgggaca attagcgcct ctttcctgtg
    14221 gttctttggg ctggctattc tcgcagcctg gctggcaccg cgcctgcgca cggcaaaatc
    14281 acagcgcatt atcaatctgg tagtgggatg tgtcatgtgg tttatagcct tgcagctggc
    14341 gagagacggt attgctcatg cacaagcctt gttcagttag gcgctatctg atggaaaaat
    14401 aaaacagagg cgctaagctt gcctccagag gtcctgaatt ttgggcaagt caattaacac
    14461 ggagagacta acgtgaagtt caaagttatc gccctggcgg cattaatggg tattagcggg
    14521 atggcagcgc aggctaacga attgccggat ggaccgcata ttgtcacctc cggtacggca
    14581 agtgtggatg cggtgccaga cattgccact cttgcgattg aagttaacgt ggccgcgaag
    14641 gatgccgcta cagccaagaa acaggcagat gagcgcgtcg cacaatacat ttccttcctt
    14701 gaactcaatc agatcgcgaa aaaagatatc agctcagcga atttacgcac ccagccagat
    14761 tatgattatc aggatggtaa aagtatcctg aaaggctacc gcgctgtgag aacggtggaa
    14821 gtcacgctcc gtcagttaga caaactgaat tccttgctgg atggcgcgct gaaggcgggt
    14881 cttaacgaaa ttcgttctgt gtcgctgggc gtggcgcagc cggatgccta taaagacaaa
    14941 gcgcgtaagg cagcgattga taacgcgatt catcaggcgc aggaactggc gaacggcttt
    15001 catcgtaaac tggggccggt atatagcgtg cgctaccatg tttccaacta tcagcccagc
    15061 ccaatggtgc ggatgatgaa agccgatgcc gcgccggtgt ctgcccagga aacttacgag
    15121 caggccgcta ttcagtttga tgatcaggtc gatgtggtct tccagttaga acctgtggat
    15181 caacaacccg ctaaaacacc tgcagcacaa taatacttgt agcccgacgt attcgtcggg
    15241 ctaatgcctt tacccgatat tgcctccttt ttctgtaatt ttctgtaaaa ccatgacgta
    15301 atcacctatc tttgctcgcg gtttcatcaa ggataggctg actgaaacgg ttaagcggac
    15361 aaggatgcgg ggagggggga tggacatttt tatttcgaaa aagatgcgca atttcatttt
    15421 attagcgcaa accaataata ttgcccgggc ggcagaaaaa atccatatga cggcttcgcc
    15481 atttggtaaa agcattgccg cgctggaaga acaaattggc tatacgctat ttacccgcaa
    15541 agataataat atcagcctca ataaagccgg tcaggaactg tatcaaaaac tgttcccggt
    15601 ttatcaacga ctttctgcga ttgataatga aatccataac tcagggcgtc gttcacgaga
    15661 aattgtgatt ggcatagata atacttatcc gacaattatt ttcgatcagt tgattagtct
    15721 cggagataag tatgaaggcg tgaccgccca gccagttgag ttcagcgaaa acggtgttat
    15781 cgataatctt tttgaccgtc agttagattt tattatctcc ccacagcatg tatctgcacg
    15841 agttcaggaa ctggaaaacc tgactatcag tgaattacca ccgctgcgat tgggctttct
    15901 cgtttctcgc cgttatgaag agcgtcaaga gcaagagctg cttcaggagc tgccctggct
    15961 acaaatgcgc tttcaaaacc gggctaactt cgaagcaatg attgatgcga atatgcgacc
    16021 ttgtgggatc aatcccacca ttatttatcg tccctacagt tttatggcca aaatcagcgc
    16081 cgtggagcgc ggacattttc tgacggtgat cccgcatttt gcctggcgac tggtgaatcc
    16141 ggcaacgctg aaatattttg atgcgccgca caggccgatg tatatgcagg aatatcttta
    16201 ttcaatcaga aatcatcgtt ataccgccac gatgcttcag catattgctg aagatcgtga
    16261 cgggacaaac cattaaccca gcatcgagcc ggttgcaatt aaattacggt gtaagtcgaa
    16321 gacgtggcta agatcgtggt gaatatgtcc gccgggcgca ttttccagat agcgatgcag
    16381 ataatcccga tacataggat gtgcacaatt atcaatgata gtgcgggcgc gttgaagcgg
    16441 ggaaagaccg cgcagatcgg cgatcccttg ttcggtgatg atcactttga cgctgtgttc
    16501 gctgtgatca acatggctgc acattggcac gacggttgag atcttgcctt ctttagcaat
    16561 cgacggagcc ataaagatcg acagatacgc gttgcgttca aaatcaccgc tgccgccgat
    16621 gccgttcatc agatcgaccc cggctacgtg cgttgagttg gcatgcccgt aaatatcaaa
    16681 ctccaggccg acgttcagag cgatgacgcc cagacgacgg atgatttccg ggttattgga
    16741 aatctcctgc ggacgcaaca caatgcggct ggcaaagtaa tccatattgt cgtaaatctt
    16801 gcgcagggaa tcggccgaga ttgtcaggct ggaggcgctg gccccgctga ttttgccggt
    16861 ttccagtaaa tgcaccaccg attcctgtag cacttccgaa tacatcatga acggaggaat
    16921 ttccgggttt tcccccagac gcgccattac cgcattattg atattgccca cgccactttg
    16981 cagcggcaga aattccggcg gaatacgccc atgcgccatt tcctgcaata agaacgtgac
    17041 cacgttatcg gcaatctgct ggcacatggg attttgctta tccagcatat taccggcgtc
    17101 gggcaagttg gtttccacga cggcgacaat ctttttcgga tcgatttgca catagcgggt
    17161 accgacgcga tccattgcat ggaagatcga cacgctattg cgccgcggtg gcgcgccagg
    17221 aatcacaata tctgccagtt ctgcaacgcg cggatcgtga tagtgattaa gttcaatgat
    17281 cactttcttc gctcgcagca gccaggtcgg cgcattaccg atcccgctgg ttaaccagac
    17341 tcgaccatcc ggtgccagtg ccgatgcttc aatgacggca acatcaatgt cgccgaagaa
    17401 accgtaattg accatttgcg ccacttcgct caaatgcagg tcaacgaaac tcaccgcgcc
    17461 ctgattgatc tttttacgta aaccggacga tgtttgatat ggcgcacgcc aggaaacagc
    17521 atcggcgtca gaaagtacat cgtcagcggc ggcgctgatt gacgcccccg tcagcaggcg
    17581 aatttgatac ggctttttgg cctcatgctg ttcgttagct ctgcgggcaa tcgcggtcgg
    17641 taaggctttc ggcgaacccg ctggggtaaa gccgctaaat gccaccatgt cgttatgctg
    17701 gataatttct gccgcttcat cggcggtcat ccttgtccac tgagtttcca tttttactcc
    17761 ttcgttcgca gggattaatg accaacgaaa ttaggtttac gtttttcgag gaaagcgttc
    17821 atcccttcct ggtaatcttc gctgtcataa accgcgcggc gcatcccctg aatacgttca
    17881 aattcatcgg agttcatggt gtgcgcttcg cccagtacac gcagctcttc tttgataaca
    17941 gcaatggcta acggcgcttt ctcagagatg tggtgcgcca tttgtaaggt gaaatcttcc
    18001 agttcttcca cttccacaac atggttgagg atgccgacag ccaacgcgcg ctgggcggtg
    18061 attggcgaag cggtaaaaat cagttctttg acaatgtgga agcccgcgtc gcgggtcagg
    18121 ttgtgaatgc cgaccaggtt atacgggacg ccgaggttta caggcgtcat tgagaaggtt
    18181 gaggtactgg cggcgatgat cagatcggaa ctcatgatca tttcaaatgc gccaccccaa
    18241 acactacctt ccaccatcga aatgatcggt ttcgggaatt tttggatcat gcgggtgatt
    18301 tgacgcaatg gatcatcata ggagagcgga tcgcgaccgc cagacggcag ttcgtgaata
    18361 tcgtgacctg cggagaagac tttggatcca ctcggtgcgc gcaaaatgat acagcgaatt
    18421 tccggccggt tgagatcgct taacgcctgc ataagatcat caataaagac tttacttaag
    18481 gcattaagtt ttcggccata gttaaactca atgaccgcca ctttgttgat agtggcaacg
    18541 ttcacatact gataagacat aaaaattcct ttaatcaaaa tattgcgtct ggataaattc
    18601 actgagctgc cgcaggccgg tgcgcggtga gagcgtattg tttttgaccg ctaaaagcgt
    18661 ctggcggtaa tagcgatcga aatcttcatt cgcgaacagg tgattcagta cttcttcttc
    18721 ggtctgctta cgcagccatt ccaccgattg ttgttgccgc acttgttgta aacgaccact
    18781 ggcagttagc gcggttttga agtcgatgat ggcgtgccag atctcatcga ttccacgttt
    18841 ttccagtgcg ctacaagtca gaacccgtgg ctgccattcg tcgtatttac gtcgcagaat
    18901 atgcagggca ctctcgtaca tatgccgggc aatggcgaca ttggtatggt tatcgccatc
    18961 gtctttgttg ataacgagca gatcagccac ttccatcagc ccttttttaa tgccctgcag
    19021 atcatcgccg ccaccggcaa tttgcaacga gataaaacag tccaccatgc gggcgacttc
    19081 cgtttccgac tgcccgacgc caaccgtttc gacaatcact acgtcataac ccgccgcttc
    19141 gcataacagc attaattccc gcgctcgctg actggcaccg cccagatgac cggaggatgg
    19201 taccgggcga ataaacgccg cttcggcacg cgccaggtca ttcatgcggg ttttatcccc
    19261 gagaatgcta ccgccagtga ccgggctgct gggatcgacc gcaataaccg cgacctttaa
    19321 tccctcacga atcaacaaca tgccaaaggc ttcaagaaag gtacttttcc ccgcgccggg
    19381 tgtgccggta acgcccagtc gcagggcgtt accgcagtac ggcataatgg catcaagcag
    19441 ctgcgtactt agtgcctgat gacgcgggtg acggctttcc accagcgtca tggcctgggc
    19501 gagtgtggca cgctcaccct gacgtaagcg gcgaatactt tctgccagcg tggcttcatt
    19561 aatcatgatg ctggcttatc agattcagta cgccgcgcac gctgtcgagc ataggtgtac
    19621 ctggaccata aatcgccgcc acgccgcgct cttgcaggaa ggcgtaatcc tgcggtggaa
    19681 tgacgccacc ggcgactacg cagatatctt cgcgtcccca ttttttcagc gcttcgacca
    19741 gttccgggat cagcgtttta tgaccggcag ccagtgagga tgcgcccact acgtgaacgt
    19801 cattttctac tgccaggcgg gcgatctctt caggtgtaga gaacatcggg cttaaatcta
    19861 cgtcgaaacc gagatcggaa taggcgctgg cgatcacttt cgcgccgcga tcgtgtccat
    19921 cctggcccat cttagcgatc agaatgcgcg ggcgacgacc attgtcggca aggaactgct
    19981 ccgtttgcgc aacaatggca tcgaactcgg aggccgattt ctccgactga tgatagcttt
    20041 gcgcaattac gccggtaaca cactggcttg gcaccagata acggtcgaaa gcggcttcca
    20101 gcgcatcgga aatttcaccc agggtggcgc gaacgcgagc ggcattaaca gcggcagcca
    20161 gcaggttttc gttatgctgt gcggcgtgag tcagggcgtt caacgcggcg gttacggcgg
    20221 catcatcacg ggtggcgcga atgcgttcca gcgaagcaat ttgctcgtta cgcaccatca
    20281 cgttgtcgat ctcaagtaca tcggtttcgt cttcgtgatc cagtttgtac ttgttgacac
    20341 caacgatgac acgcttgccc tggtcgatca gcgactgttc gcgcgctgag gcctcttcga
    20401 tcattcgttt tggcagacct gcttcgatcg ctttcgccat gccaccggct tcgtcgatct
    20461 gttggataat agctctggct tgtttgacga tttgatcggt cagcgactca atgtaatagg
    20521 atccggccag tggatcgacg gtgcggcaga gttctgattc ttcctggatg atgatctggg
    20581 tgttgcgggc aatgcgtgct gagaaatcgg taggcaaacc aagcgcttcg tcaaaggcgt
    20641 tggtatgcag tgactgagta ccgcccagcg tcgcagccag tgcttcaatg gtggtgcgga
    20701 taacgttgtt atacggatcc tgttcagtca ggctccagcc tgaggtctgg cagtgggtac
    20761 gcagcgccag tgatttcggg tcctgtgcgc caaatccact gaccgcttcg ctccataaat
    20821 aacgtgccgc acgcaacatg gcgacgttca taaacagatc catgccgata ccgaagaaga
    20881 acgacaggcg aggagcgaag tcatcaattt tcagtccggc agagattgct gctttgatgt
    20941 actcaatccc atcagcgagc gtaaatgcta cctgctgcac gcagttggca cccgcttcac
    21001 ccatgtggta accgctgata ctgatggtat taaatcgcgg catgttgccg gaacaccagg
    21061 cgatgatgtc ggcgataatg cgcattgacg gttttggcgg gtaaatatag gtgttgcggc
    21121 agaggtactc tttgagaata tcgttttgaa tggtgccggt cagtttatca ggtgtaacac
    21181 cttgctcttc tgcggcgacg atataaaacg ccagtactgg tagcactgcg ccattcatgg
    21241 tcatcgaaac cgacatttta tccagcggga tctggtcgaa caggactttc atatcttcca
    21301 cggtgtcgat agcgacgccc gctttgccga cgtcacccgc cacgcgtggg ttatcggagt
    21361 cgtagccacg gtgggtggca aggtcaaacg caacggaaag acctttttgc ccggcggcca
    21421 ggttacggcg ataaaaagcg ttggactctt ttgctgttga aaaaccagca tactgacgga
    21481 tggtccacgg ttgggcggta tacatagtgg cacgcgggcc acgaacgtag ggcggcaaac
    21541 caggaagggt acctgtcacc tccagattat cgagatcggc ttcggtatac agcggcttga
    21601 tggcgatccc ttccgcggtt tgctgaacca gcgagtcgac agttttctcc cgacggctca
    21661 attccttgtt ggcaagctgt tgccactcct gcacgttaga cattatttgc tccgtaaaac
    21721 gcaatcaaaa tgagggtatt tgcgcctacg gtgagctttt tacgtgggtt tgtcgccagc
    21781 aaaaaaaatg cattcagacg tcgttttttg ccgcctgaga tttgtctatt ttgtgatgtg
    21841 attcaaggaa tacaaaaaga agtgagggaa atgcctgata tgtgctatca ggcattattt
    21901 gatggattaa tcctgacgaa ggactttgtg accataatcg agtaacgcat cagtgacttt
    21961 acgcatcatg cggctttcag gagcaaagcg gtgccagtag agcatccgtc gttgaaatag
    22021 cccaggcgtt aagtcaatca gttcaccgct ggccagctct ttctcgattt gcaggtgcgg
    22081 gatcatacag caggtggtgc cctggcgagc aagttgtacg aacgcttctg aagaattaac
    22141 gatatggcag ggtacgctgc ctggaggcag atcgaagttt tgctgcaaaa aggcctggtg
    22201 catatcgtca agatggtcaa acgcgaccac tggcgctttc agtaatgccg aacgcgttac
    22261 gccgttaggg aaatattttt cggcaaaggg ttttgagctg acgaacagat agtcgagcgc
    22321 accgagctta tcgacaagac aactcggcag cgcctgatgt tgaatactca ccgcgccgac
    22381 cacttcgccg cggcgcagac gttcctgagt gcgggtttca tcttctacct gcaagttgag
    22441 gcggataggc gaatcagcca acacaggagc cagtgccgga agcaaccacg tcgccagact
    22501 gtcggcgttg accgccagtg aaagcagcag cggagtcgaa ccggtttgtt catcgcccag
    22561 ccactcttct tccagcaact ccacctggcg cagcagtgcc agcagttttt gcccttgttc
    22621 cgtcgggcgc ggcggtacgg tacgcaccaa cagcggctgc ccgaacatat tttccagttg
    22681 cttaatgcgc tgtgagacgg ctgattgtgt aatgcacagc ttttgtgccg cgcgctcaaa
    22741 tcctcgttca cgtatcaccg catccagtgc ctgtaatgtt ctgtagtccg ggcgtttcat
    22801 tgctgttgtc tgctcctggt aaatgctttt tcctgcacta tgacacaatt ttgtgtcagg
    22861 ttgcatatac cgaagccgtc ggcgggtaac atttgtattc gtggttaaac gcgcagctta
    22921 aaagatcagg gatgtgcgct aatgcatttc gctcagcgag ttcgcgccct ggttgtgttg
    22981 aatggcgtgg cgttattgcc tcaatttgcc tgtaaacagg ggcttgcgaa cggtgaactg
    23041 gtgcgcctgt ttgcaccgtg gagcggcata cccagattgt tgcatgcctt atttgcgggg
    23101 cgaaagggga tgcctgccat tgcgcgatat tttatggatg agttaaccac gcggcttgcc
    23161 aacggggtct gaatcgcttt ttttgtatat aatgcgtgtg aaatttcata ccacaggcga
    23221 aacgatcatg acgcaggatg aattgaaaaa agcagtagga tgggcggcac ttcagtatgt
    23281 tcagcccggc accattgttg gtgtaggtac aggttccacc gccgcacact ttattgacgc
    23341 gctcggtaca atgaaaggcc agattgaagg ggccgtttcc agttcagatg cttccactga
    23401 aaaactgaaa agcctcggca ttcacgtttt tgatctcaac gaagtcgaca gccttggcat
    23461 ctacgttgat ggcgcagatg aaatcaacgg ccacatgcaa atgatcaaag gcggcggcgc
    23521 ggcgctgacc cgtgaaaaaa tcattgcttc ggttgcagaa aaatttatct gtattgcaga
    23581 cgcttccaag caggttgata ttctgggtaa attcccgctg ccagtagaag ttatcccgat
    23641 ggcacgtagt gcagtggcgc gccagctggt gaaactgggc ggtcgtccgg aataccgtca
    23701 gggcgtggtg accgataatg gcaacgtgat cctcgacgtc cacggcatgg aaatccttga
    23761 cccgatagcg atggaaaacg ccataaatgc gattcctggc gtggtgactg ttggcttgtt
    23821 tgctaaccgt ggcgcggacg ttgcgctgat tggcacacct gacggtgtca aaaccattgt
    23881 gaaatgatct gacgggggaa cctcccccgt taaaaaaatt ctcttcatta aatttggtga
    23941 catgtgtcac gtttttacct ggctattgtc gattgctcta aataaatctt ctaaaccagc
    24001 atattcatcc aagaattacc tttgcgtgat atttcctcaa catcgcgacg caaacgttca
    24061 tattgccgca atattatttt ttgatatgtt gaaaggcgga cgcaaatccg cacacaacat
    24121 ttcaaaagac aggattgggt aaatggcaaa ggtatcgctg gagaaagaca agattaagtt
    24181 tctgctggta gaaggcgtgc accaaaaggc gctggaaagc cttcgtgcag ctggttacac
    24241 caacatcgaa tttcacaaag gcgcgctgga tgatgaacaa ttaaaagaat ccatccgcga
    24301 tgcccacttc atcggcctgc gatcccgtac ccatctgact gaagacgtga tcaacgccgc
    24361 agaaaaactg gtcgctattg gctgtttctg tatcggaaca aaccaggttg atctggatgc
    24421 ggcggcaaag cgcgggatcc cggtatttaa cgcaccgttc tcaaatacgc gctctgttgc
    24481 ggagctggtg attggcgaac tgctgctgct attgcgcggc gtgccggaag ccaatgctaa
    24541 agcgcaccgt ggcgtgtgga acaaactggc ggcgggttct tttgaagcgc gcggcaaaaa
    24601 gctgggtatc atcggctacg gtcatattgg tacgcaattg ggcattctgg ctgaatcgct
    24661 gggaatgtat gtttactttt atgatattga aaataaactg ccgctgggca acgccactca
    24721 ggtacagcat ctttctgacc tgctgaatat gagcgatgtg gtgagtctgc atgtaccaga
    24781 gaatccgtcc accaaaaata tgatgggcgc gaaagaaatt tcactaatga agcccggctc
    24841 gctgctgatt aatgcttcgc gcggtactgt ggtggatatt ccggcgctgt gtgatgcgct
    24901 ggcgagcaaa catctggcgg gggcggcaat cgacgtattc ccgacggaac cggcgaccaa
    24961 tagcgatcca tttacctctc cgctgtgtga attcgacaac gtccttctga cgccacacat
    25021 tggcggttcg actcaggaag cgcaggagaa tatcggcctg gaagttgcgg gtaaattgat
    25081 caagtattct gacaatggct caacgctctc tgcggtgaac ttcccggaag tctcgctgcc
    25141 actgcatggt ggtcgtcgtc tgatgcacat ccacgaaaac cgtccgggcg tgctaactgc
    25201 gctgaacaaa atcttcgccg agcagggcgt caacatcgcc gcgcaatatc tacaaacttc
    25261 cgcccagatg ggttatgtag ttattgatat tgaagctgac gaagacgttg ccgaaaaagc
    25321 gctgcaggca atgaaagcta ttccgggtac cattcgcgcc cgtctgctgt actaattccc
    25381 cttctctgaa aattaacggg caggtcactg acttgcccgt ttttttatcc cttctccaca
    25441 ccgttgccgc gttgcgcatt ctactttgcg agtctgctcc agaaaataaa tcaaagtcag
    25501 atcaatgcgt tgtgtttatt taatggggat ttacgatggc gggacagcat ggggctgtaa
    25561 cggtaaagcc ctcaccgaag cgagggctta aaggagaagg gttatgatgc gacttgtcat
    25621 catactgatt gtactgttac tgataagttt cggagcttat taacagtcag tctcagggga
    25681 ggagtcatcc tcccttaccc ttactcacta aattaggtca aagaatcaac gatgtcaatc
    25741 agggcgatgc ggggtgcatc gccctgaacc gaactttttg atagccactt catcgcccac
    25801 gtttactgcc gtaatagatc ctttttccca aaaattatct ctgttttgca tggggttttt
    25861 cgagcacgct cgaagaaaag atttaaaggt agatcaatgc gttgtggtta tttaaagaga
    25921 gcttacgata gctgggcagc atggggctgt aacggtaaag ccctcaccga agcgagggct
    25981 tgaaggagaa gggttatgat gcgacttgcc atcatactga ttgtactgtt actcataagt
    26041 ttcccagctt attaacagtc agtcacaggg gaggagcaat cctcccttac ccttactcac
    26101 taaattaggt taaagaatca acgatgtcaa tcagggcgat gcaggtgtat cgcccttacc
    26161 actcccagac tttcgacggt gtaaccaccg caggaagagg gatatcccac tcttcaacgg
    26221 ggagtttttc caccaactga caatcatgcg cataacccac cggttgcgtt ttatagtgct
    26281 gccagttttg taaggtccga tcataaaaac caccgcccat tcccaggcgc tgaccgtact
    26341 catcaaaggc gaccagcggt gtgatcagca cgtctaatcg ggaaaggggt agcacgtcac
    26401 gcacatccag ttttggctca tggatcttca acctgttcat caccagttcg ctttgcggat
    26461 ggtaattcag gaacagcaaa ttaccggcac taaagggatg caaaactgga agatatacgc
    26521 gcttaccggc gcgccagagt tgttctatta gcggctgggt gtcgagttca ccatcaaaag
    26581 agaggaatac agcgaccgta tgcgccatca ccaccggggg ataagtcatc atccgggtag
    26641 cggcttgttg acccatttcc tgctgttgtt ccggcgttaa cgcacgacga cgttgccgaa
    26701 tcattttgcg gatttcttgt cgggataatg tcagtgggag ttctggtagt tgcgtcatgg
    26761 ctggtgccag ataagaaggg aatctccgag atgccgccgc aggctgtaac ccttgaaccc
    26821 ttggttcaag gtgaatgtgt cgtcgcagtt ttaaggcttc tcggacggac cgagcatgct
    26881 caccaaccgc ggagcgccac attcttgtgg tatgaaatat cggctcaggg gactggcccg
    26941 cttgcgaaca tctcagagaa attttgtctt cacggttact ctaccacagt aaaccgaaaa
    27001 gtgtcattca aagttttggt tagttttttc ggtgatgcga ccttgttcaa gtaacgcttg
    27061 ttctatggtc tgctgcagca tccgaatacg ctgttccata cttgccgcgt agtcacgagt
    27121 cttcgctttt tcttgcgcta actcatagct gatattcaat gcggcaatga agaccaactg
    27181 ttcagtattt gtgactctag tgcgttcttt cagatcttgc aaccgttggt tcagatcgtc
    27241 cgctgcctga ttcaacgcat ccctttggtc aggcgggcag ttcacacgca gtgaacggcc
    27301 aaaaatttgg atatcgacgg gttgtgcaga catgccacct tcctgctgat tgactgcgct
    27361 gccttcgtct ttagacccat ggtctgcgaa ggggcgacac tatagctacc ctgatgagaa
    27421 gagacaagcc cttttctggt ccaccagggc ccaaagtggt agcatatcat gaatattcct
    27481 ccctttgacg acgaatgctt atgtctatac agaacgaaat gcctggttac aacgaaatga
    27541 accagtatct gaaccaacaa gggacgggtc tgacccctgc tgagatgcat ggtttaatca
    27601 gtgggatgat atgtggcggt aacgatgaca gctcatggct accgctactt cacgacctga
    27661 cgaacgaagg catggctttc ggtcatgagc tggcacaggc actgcgtaaa atgcactctg
    27721 ccaccagcga tgccctgcag gatgacggct tcctttttca gctttatctg cctgatggcg
    27781 atgatgtcag cgttttcgat cgggctgatg cattggcagg ttgggtcaat cacttcctgc
    27841 ttggtcttgg cgttacgcaa ccgaagctgg ataaagtgac cggcgaaacc ggtgaagcta
    27901 tcgacgatct gcgtaacatt gcgcaactgg gttacgacga agacgaagat caggaagagc
    27961 ttgaaatgtc gcttgaagag atcatcgaat acgttcgtgt tgccgcgctg ttatgccacg
    28021 acacctttac tcatccgcaa ccgaccgcgc cagaagtaca aaaaccgact ctacactaaa
    28081 aacaaaaaac gtaaggagag tgttatgagt gagatatccc ggcaagagtt tcagcgtcgc
    28141 cgtcaggccc tggtggagca aatgcaaccc ggcagcgccg cgctgatttt tgctgcacca
    28201 gaagtaacac gtagcgccga cagcgaatac ccctatcgtc agaacagtga cttctggtac
    28261 ttcaccggct ttaacgaacc ggaagcggtg ctggtgctga ttaaaagcga tgacactcat
    28321 aaccacagcg ttctgtttaa ccgcgttcgc gacctgacgg cggagatctg gtttggccgt
    28381 cgtttaggtc aggatgccgc gccagagaaa ctgggcgttg accgcgcact ggcattcagc
    28441 gaaattaatc agcaacttta tcaattactt aatggtctgg atgtggttta ccacgcccag
    28501 ggcgaatata cctatgctga tgaaatcgtg aacagcgcgc tggaaaagct gcgtaaaggt
    28561 tcgcgacaaa atctcaccgc gccggcaacg atgatcgact ggcgtcccat tgttcatgaa
    28621 atgcgcctgt tcaaatcgcc agaagagatt gccgtacttc gccgcgcggg tgaaatcacc
    28681 gccctggcgc atacccgggc gatggaaaaa tgccgtccgg gaatgttcga gtaccacctg
    28741 gaaggcgaaa ttcaccacga atttaaccgc cacggcgcgc gctatccttc ctataacacc
    28801 attgtcggca gcggtgaaaa cggctgcatt ttgcactaca ccgaaaacga gtgtgaactg
    28861 cgtgacggtg acctggtgtt gattgacgcg ggttgtgaat acaaaggtta cgctggcgat
    28921 attacccgca ccttcccggt caacggcaaa ttcactcagg cccagcgtga aatctacgac
    28981 attgtgctgg agtctctcga aaccagcttg cgcctgtatc gtccgggaac ttccatgcag
    29041 gaagtcaccg gtgaagtggt gcgcatcatg gttagcggcc tggtaaaact cggcattctg
    29101 aaaggtgatg ttgatgaact gatcgctcag aacgcccatc gtcctttctt tatgcatggc
    29161 cttagccact ggttagggct agatgtccat gacgttggcg tttatggtca ggatcgctcg
    29221 cgcattctgg aaccgggcat ggtactgacc gtagagccag ggctgtatat tgcgccggat
    29281 gcagaagtgc cagaacaata tcgcggtatc ggcattcgta ttgaagacga cattgtgatt
    29341 accgaaaccg gtaacgaaaa cctcaccgcc agcgtggtga aaaagccgga agaaatcgaa
    29401 gcgttgatgg cagctgcgag aaagcaatga gcgtaatcat cgtcggtggc ggcatggcgg
    29461 gcgcgacgct ggcgctggct atttcccggt taagtcacgg ggcgctgccg gtacatttga
    29521 ttgaagcgac cgcgccagag tcacatgctc atccgggctt tgatggacga gctattgcgc
    29581 tagcggcggg gacctgtcag caactggcgc gcatcggcgt ctggcaatct ctggctgatt
    29641 gcgcaaccgc catcactacc gtgcatgtca gcgatcgtgg tcatgctgga ttcgtcaccc
    29701 tcgccgcaga agattaccaa ctggcggcgc tggggcaggt tgtcgaattg cataatgtcg
    29761 ggcaacggct gtttgcattg ctgcgaaaag cacctggcgt aatgctgcat tgccccgatc
    29821 gcgtagctaa cgttgcccgt actcagagtc acgttgaagt gacgctggag agcggcgaga
    29881 tgctgacggg ccgcgtgctg atagccgctg atggcaccca ttcagcgtta gccaccgcgt
    29941 gcggcgttga ttggcagcag gagccttacg aacaactggc cgtgattgcc aacgttgcga
    30001 cttccgttgc gcacgaaggc cgcgcttttg aacgcttcac gcaacatggc ccgctggcga
    30061 tgttgccgat gtctgacgga cgctgttcgc tggtctggtg tcatccactg gaacggcgcg
    30121 aagaggtgct gtcgtggagc gacgagaagt tttgccgtga actccagtcg gcctttggct
    30181 ggcgacttgg aaaaattacc cacgccggta aacgcagtgc ttatccgctg gcgttaaccc
    30241 gcgccgccag agctattacc catcgtaccg tgctggtggg caatgcggcg caaactctgc
    30301 acccgattgc cgggcaaggg tttaacctcg gtatgcgaga tgtcatgagc cttgcggaaa
    30361 ccctaactca ggcgcatgag cgcggagaag acatcggtga ttacggcata ttgtgccgct
    30421 atcaacagcg tcgacagagc gatcgcgaag caaccatcgg cgtcacggac agcctggtac
    30481 atctttttgc caaccgttgg gcaccgctgg ttgtcgggcg caacatcgga ctgatgacga
    30541 tggaattatt caccccggca cgcgatgtgc tggcgcagcg caccctcggt tgggtggcgc
    30601 gttgaaggcg gttttaagga ataaacaatg caaagtgttg atgtagccat tgttggtggc
    30661 ggcatggtgg ggctggcggt tgcctgcggc ttacagggga gcggcttacg cgttgccgta
    30721 ctggagcagc gcgtaccgga acctctggcg gcggatgcac caccacaact gcgcgtttcg
    30781 gctatcaatg ccgccagcga aaaattactc acccgtcttg gcgtctggca ggacattctc
    30841 tctcgtaggg ccagttgtta tcacggtatg gaagtgtggg acaaagacag ttttggtcac
    30901 atttcgtttg acgatcaaag catgggctat agccatcttg ggcatatcgt tgaaaactca
    30961 gtgattcact acgcgctgtg gaacaaagcg cagcagtcgt cagatatcac tctgttggcc
    31021 cccgcagaat tacagcaggt cgcctgggga gaaaatgaaa ctttcctgac gctgaaagat
    31081 ggcagcatgt taacggcgcg tctggtgatt ggcgcggacg gtgctaattc ctggttgcgc
    31141 aacaaagcag atattccgct gactttctgg gattatcagc atcacgcgct ggtagcgacc
    31201 attcgcacgg aagaaccgca tgatgcggtg gcgcggcagg ttttccatgg cgaaggcatt
    31261 ctggcctttt taccgcttag cgatccgcat ctttgctcaa ttgtctggtc actgtcgcca
    31321 gaggaagcgc agcggatgca gcaggcaagt gaagatgaat ttaatcgcgc gttaaatatc
    31381 gcttttgata atcgcctggg cttatgcaag gttgagagcg cgcgtcaggt gttcccactg
    31441 acggggcgtt atgcgcgcca gtttgccgcg caccgtctgg tgctggtggg cgacgccgcg
    31501 cataccattc acccgctggc ggggcaggga gtaaatctcg gctttatgga tgctgcagag
    31561 ctgattgctg aactgaaacg gttgcatcgt caggggaaag acatcgggca gtacatttac
    31621 ctgcgccggt atgagcgtag ccgcaagcac agtgcggcgc tgatgctggc tggtatgcag
    31681 ggattccgcg atctgttttc cggtaccaat ccggcgaaaa aactgctgcg tgatattggt
    31741 ttgaaactgg ccgacacgct tcctggcgtt aaaccacaac ttatccgcca ggcaatggga
    31801 ttaaacgatt tgcctgaatg gctgcgttaa aaatttctct tctgctgttt atttgatacc
    31861 catcacactt tcatctcccg gttttttcgc cgggagattt tcctcatttg aaataaacta
    31921 atttcacctc cgttttcgca ttatattttc taatgtcatt attttttgat ttagtgtttt
    31981 ttgacatttt tttagctctt aatattgcct tattcaaatt agctttctaa tggcatcatc
    32041 tttatataga aactggtgtg ttttttggtt ttttattctg tcgcgatttt ggcgtttttt
    32101 aaccataagc taatgtgatg atcaatttta ccttatggtt aacagtctgt ttcggtggta
    32161 agttcaggca aaagagaacg attgcgttgg ggaccgggag tggctccgat gctgggtttc
    32221 gtggtgataa tttcaccatg aaaagttgtc agccccgctt attcaatgag gacaagatgg
    32281 cacaacagac tcctttgtac gaacaacaca cgctttgcgg cgctcgcatg gtggatttcc
    32341 acggctggat gatgccgctg cattacggtt cgcaaatcga cgaacatcat gcggtacgta
    32401 ccgatgccgg aatgtttgat gtgtcacata tgaccatcgt cgatctccgc ggcagccgca
    32461 cccgggagtt tctgcgttat ctgctggcga acgatgtggc gaagctcacc aaaagcggca
    32521 aagcccttta ctcggggatg ttgaatgcct ctggcggtgt gatagatgac ctcatcgtct
    32581 actactttac tgaagatttc ttccgcctcg ttgttaactc cgccacccgc gaaaaagacc
    32641 tctcctggat tacccaacac gctgaacctt tcggcatcga aattaccgtt cgtgatgacc
    32701 tttccatgat tgccgtgcaa gggccgaatg cgcaggcaaa agctgccaca ctgtttaatg
    32761 acgcccagcg tcaggcggtg gaagggatga aaccgttctt tggcgtgcag gcgggcgatc
    32821 tgtttattgc caccactggt tataccggtg aagcgggcta tgaaattgcg ctgcccaatg
    32881 aaaaagcggc cgatttctgg cgtgcgctgg tggaagcggg tgttaagcca tgtggcttgg
    32941 gcgcgcgtga cacgctgcgt ctggaagcgg gcatgaatct ttatggtcag gagatggacg
    33001 aaactatttc tcctttagcc gccaacatgg gctggactat cgcctgggaa ccggcagatc
    33061 gtgactttat cggtcgtgaa gccctggaag tgcagcgtga gcatggtaca gaaaaactgg
    33121 ttggtctggt gatgaccgaa aaaggcgtgc tgcgtaatga actgccggta cgctttaccg
    33181 atgcgcaggg caaccagcat gaaggcatta tcaccagcgg tactttctcc ccgacgctgg
    33241 gttacagcat tgcgctggcg cgcgtgccgg aaggtattgg cgaaacggcg attgtgcaaa
    33301 ttcgcaaccg tgaaatgccg gttaaagtga caaaacctgt ttttgtgcgt aacggcaaag
    33361 ccgtcgcgtg atttactttt ttggagattg attgatgagc aacgtaccag cagaactgaa
    33421 atacagcaaa gaacacgaat ggctgcgtaa agaagccgac ggcacttaca ccgttggtat
    33481 taccgaacat gctcaggagc tgttaggcga tatggtgttt gttgacctgc cggaagtggg
    33541 cgcaacggtt agcgcgggcg atgactgcgc ggttgccgaa tcagtaaaag cggcgtcaga
    33601 catttatgcg ccagtaagcg gtgaaatcgt ggcggtaaac gacgcactga gcgattcccc
    33661 ggaactggtg aacagcgaac cgtatgcagg tggctggatc tttaaaatca aagccagcga
    33721 tgaaagcgaa ctggaatcac tgctggatgc gaccgcatac gaagcattgt tagaagacga
    33781 gtaacggctt tattcctctt ctgcgggaga ggatcagggt gaggaaaatt tatgcctcac
    33841 cctcactctc ttcgtaagga gagaggttca caattcactg cacgtttcag gaaccatcgc
    33901 tcatgacaca gacgttaagc cagcttgaaa acagcggcgc ttttattgaa cgccatatcg
    33961 gaccggacgc cgcgcaacag caagaaatgc tgaatgccgt tggtgcacaa tcgttaaacg
    34021 cgctgaccgg ccagattgtg ccgaaagata ttcagcttgc gaccccgccg caggttggcg
    34081 caccggcgac cgaatacgcc gcactggcag aactcaaggc tattgccagt cgcaataaac
    34141 gcttcacgtc ttacatcggc atgggttaca ccgccgtgca gctaccgccg gttatcctgc
    34201 gtaacatgct ggaaaatccg ggctggtata ccgcgtacac tccgtatcaa cctgaagtct
    34261 cccagggccg ccttgaagca ctgctcaact tccagcaggt aacgctggat ttgactggac
    34321 tggatatggc ctctgcttct cttctggacg aggccaccgc tgccgccgaa gcaatggcga
    34381 tggcgaaacg cgtcagcaaa ctgaaaaatg ccaaccgctt cttcgtggct tccgatgtgc
    34441 atccgcaaac gctggatgtg gtccgtactc gtgccgaaac ctttggtttt gaagtgattg
    34501 tcgatgacgc gcaaaaagtg ctcgaccatc aggacgtctt cggcgtgctg ttacagcagg
    34561 taggcactac cggtgaaatt cacgactaca ctgcgcttat tagcgaactg aaatcacgca
    34621 aaattgtggt cagcgttgcc gccgatatta tggcgctggt gctgttaact gcgccgggta
    34681 aacagggcgc ggatattgtt tttggttcgg cgcaacgctt cggcgtgccg atgggctacg
    34741 gtggcccaca cgcggcattc tttgcggcga aagatgaata caaacgctca atgccgggcc
    34801 gtattatcgg tgtatcgaaa gatgcagctg gcaataccgc gctgcgcatg gcgatgcaga
    34861 ctcgcgagca acatatccgc cgtgagaaag cgaactccaa catttgtact tcccaggtac
    34921 tgctggcaaa catcgccagc ctgtatgccg tttatcacgg cccggttggc ctgaaacgta
    34981 tcgctaaccg cattcaccgt ttgaccgata tcctggcggc aggcctgcaa caaaaaggtc
    35041 tgaagctgcg ccatgcgcac tatttcgaca ctctgtgtgt ggaagtggcc gacaaggcgg
    35101 gcgtactggc gcgtgccgaa gcggctgaaa tcaacctgcg tagcgatatc ctaaacgcgg
    35161 ttgggatcac ccttgatgaa accaccacgc gtgaaaacgt aatgcagctt ttcagcgtgc
    35221 tgctgggcga taaccacggg ctggagatcg acacgctgga caaagacgtg gctcacgaca
    35281 gccgctctat tcagcctgcg atgctgcgcg acgacgaaat cctcactcat ccggtgttta
    35341 atcgctacca cagcgaaacc gaaatgatgc gctatatgca ctcgctggag cgtaaagatc
    35401 tggcgctgaa tcaggcgatg atcccgctgg gttcctgcac catgaaactg aacgccgccg
    35461 ccgagatgat cccaatcacc tggcaggaat ttgccgaact gcacccgttt tgcccgccgg
    35521 aacaggctga aggttatcag cagatgattg cgcagctggc tgactggctg gtgaaactga
    35581 ccggttacga cgccgtttgt atgcagccga actccggcgc acagggcgaa tacgcgggcc
    35641 tgctggcgat tcgtcattat catgaaagcc gcaacgaagg gcatcgcgat atctgcctga
    35701 tcccggcttc tgcgcacgga actaaccccg cttctgcaca tatggcagga atgcaggtgg
    35761 tggttgtggc gtgtgataaa aacggcaaca tcgatctgac tgatctgcgc gcgaaagcgg
    35821 aacaggcggg cgataacctc tcctgtatca tggtgactta tccttctacc cacggcgtgt
    35881 atgaagaaac gatccgtgaa gtgtgtgaag tcgtgcatca gttcggcggt caggtttacc
    35941 ttgatggcgc gaacatgaac gcccaggttg gcatcacctc gccgggcttt attggcgcgg
    36001 acgtttcgca cctcaacctg cataaaactt tctgcattcc gcacggcggt ggtggtccgg
    36061 gtatgggacc gatcggtgtg aaagcgcatc tggcaccgtt tgtaccgggt catagcgtgg
    36121 tgcaaatcga aggcatgtta acccgtcagg gcgcagtttc tgcggcaccg ttcggtagcg
    36181 cctctatcct gccaatcagc tggatgtaca tccgcatgat gggcgcagaa gggctgaaaa
    36241 aagcaagcca ggtggcaatc ctcaacgcca actatattgc cagccgcctg caggatgcct
    36301 tcccggtgct gtataccggt cgcgacggtc gcgtggcgca cgaatgtatt ctcgatattc
    36361 gcccgctgaa agaagaaacc ggcatcagcg agctggatat tgccaagcgc ctgatcgact
    36421 acggtttcca cgcgccgacc atgtcgttcc cggtggcggg tacgctgatg gttgaaccga
    36481 ctgaatctga aagcaaagtg gaactggatc gctttatcga cgcgatgctg gctatccgcg
    36541 cagaaatcga ccaggttaaa gccggtgtct ggccgctgga agataacccg ctggtgaacg
    36601 cgccgcacat tcagaacgaa ctggtcgccg agtgggcgca tccgtacagc cgtgaagttg
    36661 cagtattccc ggcaggtgtg gcagacaaat actggccgac ggtgaaacgt ctggatgatg
    36721 tttacggcga ccgtaacctg ttctgctcct gcgtaccgat tagcgaatac cagtaattca
    36781 ctgattcgac tatcttctaa aggcgcttcg gcgccttttt agtcagatga caaagtacaa
    36841 aagcgctcag acagtcccct cccccctttg gggagagggt tagggtgagg ggaacaggcc
    36901 ggcactggcg cgaatattta ccctcacccc ggccctctcc ctgaaagggc gaggggaaaa
    36961 gcgtgccaac attgaagatt gagccagttt gttagcaatc tcaaagatac gtcaacgaat
    37021 taatttttct cggaaaaaca aatggctata gcacttgtga ccggtggcag tcgcggcatc
    37081 gggcgggcaa ctgcattact gttggcgaaa gaagagtata cggtggcggt taattatcaa
    37141 caaaacctcc atgcggcgca ggaagtggtg aacttaatca cgcaagccgg tggcaaggca
    37201 ttcgtgctcc aggcggatat cagcgacgaa aatcaggtca tcgcaatgtt tacagcaatc
    37261 gatcagcacg atgaaccgct agcagcgctg gtcaataacg ccgggatctt gtttacccag
    37321 tgcaccgttg aaaaccttac cgcagagcga atcaaccgag tactttctac caacgtgacg
    37381 ggatattttc tctgctgccg cgaggcggta aaacgcatgg cgcttaaaaa tggtggcagt
    37441 ggcggcgcta tcgtcaatgt ctcttcggtg gcctcacggt tgggttcgcc aggggaatat
    37501 gttgattacg cggcatcgaa aggggcgatt gatacgttaa ccaccggact atcgctggaa
    37561 gtcgccgcgc aggggatccg ggttaactgc gtgcggccag ggtttattta taccgaaatg
    37621 cacgccagcg gcggcgagcc tggacgcgtc gatcgcgtta agtcgaacat ccccatgcag
    37681 cgtggtggac aggcagaaga ggtcgcgcag gccattgtct ggctactaag tgataaagcc
    37741 tcttacgtca cgggaagttt tatcgatttg gcgggcggga aataaaacag ggaagttgtc
    37801 tgaccggatg caacaagtat tgcatccggt acttcatcga cttaaagctt ctcgccgttg
    37861 ctggcaatca cctctttgta ccagttaaag ctcttcttac gtgaacgcga catatcgcca
    37921 gtaccgtcgt catgtttatt cacatagata aagccgtagc gtttgctgta ctgcccggta
    37981 gtgaatgaca cgcagtcgat gcagccccac ggtgtgtagc ccatcagatc cacaccatcg
    38041 taagtcactg cttttttcat ctcttcaata tgggcgcgca ggtagtcaat gcggtagtcg
    38101 tcgttgatgc tgccatcttc ttccactttg tcgtaagcgc caaaaccgtt ttcgacaata
    38161 aacagcggcc tctgataacg ctcatacagt tcgcaaaggg catagcgcag acctactgga
    38221 tcaatctgcc agccccagtc agacgcttta acatacgggt tcggtacgct gccttcaaaa
    38281 ccagagatcg catcgccggt gccgccttcg gccttcactg cgttggtcat gtaatagctg
    38341 aaaccaagat aatcgcaggt gccttcacgc agtacatcga gatcgccgtc ttccattttg
    38401 atgttaaatc cgcgacgctc ccactcgttc aacacatagg acgggtaata gccgcgtagc
    38461 tgcacatcgg taaagacgta gcgttcgcgc atcgactcct gagcgaacat cacatcgtcc
    38521 gggttacagc agtagggata gagcggcacc atcgccagca tacagccgac tttcatctcc
    38581 gggttaatgc gacgcgcagc tttcaccgcc agggcgctgg cgacaaactg gtgatgcagc
    38641 acctgataca tcgtctcttc cgggttctca tgctcggtat aaaccacgcc ggagcagcag
    38701 taaccgaaca gcggtgcacg ccagttacgc tggttgttaa tttcgttgaa ggtcatccag
    38761 tatttgactt tatgcttata gcgttcaaac accacttccg cgaaacggac aaagaaatca
    38821 accactttac ggttggtcca gctaccgtat tgctgcacca gatgcagcgg catttcaaag
    38881 tgggagaggg tgatcaccgg ttcgatgttg tatttcagca gttcatcgaa catatcatcg
    38941 tagaacttca gcccttcttc gtttggctga gcttcatcac cttttggaaa aatacgcgtc
    39001 caggcgatgg aagtccgaaa acatttgaag cccatttcgg caaatagctt gatgtcttcc
    39061 ttgtagtgac cataaaaatc aacggcttca tggtttggat agtatttgcc tggcaagact
    39121 tctttggtga tttcgcgcgg cacgccgtgt gcgccaccgg tcagaacgtc acaaatgctc
    39181 ggccctttgc cgcctttgtt ccagccgcct tcgacctgat gagcggcaac tgcgccgccc
    39241 cataagaaat ctttcggtaa ggtgagtttt ttcactatca taggctccag atgagtcaat
    39301 tcttacagga aatagtacca tgcagccaaa cgacatcact ttttttcaac gtttccagga
    39361 tgacattctg gctgggcgta aaaccatcac catccgcgac gagtctgaat cgcacttcaa
    39421 aacgggtgat gtgcttcgtg tcgggcgttt tgaagatgac ggttattttt gcacgattga
    39481 agtcaccgca acctcaaccg taacgctgga tacgctgacg gaaaaacatg cagagcagga
    39541 aaatatgacc ctgactgaac tgataaaggt cattgccgac atctatcccg gtcagacaca
    39601 gttttatgtg attgaattta aatgtcttta aattgaactc acgcctgtta gttgaaattt
    39661 cgcatttaat ttcatgattt ttaggagatt agtctcaaat cagaatttat tttagctaac
    39721 aggtgttcac tggaactatt ctcagttacg ctggagaggt atacatgtgc gtgtacgttt
    39781 ctccggagta agttatggtt cagaagcccc tcattaagca gggatattcg ctggcagagg
    39841 aaattgccaa cagcgtcagt cacggcattg ggttggtgtt tggtatcgtt gggctggtgt
    39901 tgctactggt tcaggcggtg gatctcaatg ccagcgccac agcgataacc agttacagcc
    39961 tctatggcgg cagtatgatc ctgctgttcc tcgcttcgac gctctatcac gccattcctc
    40021 atcaacgggc aaaaatgtgg ctgaagaaat ttgaccattg cgctatttac ctgttgattg
    40081 ccggaaccta cacgccgttt ttgctggtgg ggctggattc tccgttagcg cgcgggttga
    40141 tgattgttat ctggagcctg gcattgctgg gtattctgtt taaactgacc atcgcgcacc
    40201 gattcaaaat tttatctctg gtgacctatc tggcgatggg ctggctgtcg ctggtggtaa
    40261 tttatgaaat ggcagttaag ctcgcggcgg gcagcgttac cttactggcg gtaggcggcg
    40321 tggtttattc gctcggggtg attttctacg tctgcaaacg cattccatac aaccatgcca
    40381 tctggcacgg cttcgtgctc ggcggtagtg tgtgccactt tctggcgatc tatttgtata
    40441 ttgggcaggc gtaatgggta tgcctttgta ggcctgataa gacgcgccag cgtcgcatca
    40501 ggcatcggag cgcaaccgcc ggatgcggcg tgaacgcctt atccgatcta cgggcctcgt
    40561 ccctgttgtg ataaaggcat caaatcccag acatgataag acgcgtcagc gtcgcatcag
    40621 gcgataaatg cctgatgcga tacagagatt tactcttcga gcgaatacgg cagcggctcg
    40681 atatgcagtg tattcgcatc gtcgcgtacg cggaagatgc tgtccggttc catatcgtta
    40741 ttcatgacga cctgtaccac gacctgacca tcttccagtt ttaccgcagc cagcaccgta
    40801 ccggtacgac gccagttctc gcccattttc agctctaagt cttcaccagc ttccggcagt
    40861 cggctggcgc tacctgccag caaccagagc gcgcgtttgt tggcaccacg gaattttgct
    40921 cgcgccacca tctcttgtcc ggtataacag cctttcttaa agctgatacc gcccagcgcc
    40981 tggagattgg tcgcctgtgg gataaactgc ccgctgttgg cggcatcaat caccgggaaa
    41041 cccgcttcaa tgtttaatgc cagccactgt tggctattgt tcagttccgc ttcaccgcgc
    41101 agtttatcgg tcagcatatt agcagtagct tcatcggtta cgatcaggaa acgttctgcc
    41161 gggtgttcaa accatagcaa agtggtcgcg ccttctttga ctacctgttt ttctttcgaa
    41221 ggcagttcgc taaagagatt tgccagcgcg gcgcgcgcct gaaaaccggc aacaccaagc
    41281 agcacacgct cgtcgtctgg cgcgatggtc actttagaga ataccgcata ttttttcagt
    41341 tcagtcagct gcggttcacg cacgctgcgc cgttcaatcc atgcaaagcc atcgccgtcg
    41401 cggaacagac gtaaattgct ccacatttta cctttggcgt cgcaatgggc ggcgagcagg
    41461 tgctgatctt ctgccatctg gctgacatct gctgtcacct gaccctgcat atatttttcg
    41521 ctgtccgcgc cagtaatggt ggcaagcgcc cagtcatcaa gcgtcatcag cgtcagcggt
    41581 aaacgggcag aagccgtagg ctgacgggga ggaaaaggtg taaaagccat aatagagtcc
    41641 tgagttgctt aacggcgtat taatgactaa tggtaaaaga gctatgaggc aatgcaagtg
    41701 ctttcactac gcgatctgtg ccttctgcga ggcgacttcc aaaaaaatga agccattgaa
    41761 ttgttgtgaa ttaatttcgc gatcgcgatg gtgtttactg atattcccgt aaaagaaggc
    41821 gaaaaacacg ttacaatagc ggggtactgg attttcgtga gacaggaaga agatggacat
    41881 taataacaaa gcccgcattc attgggcatg ccgccgtggt atgcgcgaac tcgatatttc
    41941 aatcatgccg tttttcgaac atgagtacga cagcttaagc gatgacgaaa aacgcatctt
    42001 tattcgtctg ctggaatgtg acgatccgga cctgtttaac tggctgatga atcacggtaa
    42061 accggccgat gcagaactgg aaatgatggt ccgactcatc cagacacgga accgggaacg
    42121 tggtcctgtg gcaatctgat ttgcgcgtct cctggcgcgc acagtggctt tccttgctga
    42181 ttcatgggct ggttgccgct gttattttac tcatgccctg gccactcagt tacaccccgt
    42241 tatggatggt gttactttcg ctggtggtgt ttgattgcgt tcgcagccag cggcgtatta
    42301 atgctcgcca gggggaaatt cgcttgttga tggacgggcg tttgcgttgg caagggcagg
    42361 agtggagcat cgtcaaagca ccgtggatga ttaagagcgg catgatgctg cgtttacgtt
    42421 ctgatggcgg taaacggcaa catttatggc tggcagccga cagcatggac gaagctgaat
    42481 ggcgggattt acggcggatt ttgttgcaac aagagacgca aagataaaga tgacggcaaa
    42541 gcatatgcgc taagccgtca gtgagatcag gcgtaatgct ctgccatttc gttgaggatt
    42601 tgctcgcacc agctctgaat acgctcgtcg ctaaggtcat actggttagt ttcatccagc
    42661 gccagaccca cgaacagttg cccgtcagca atcaccggtt tcgggctggt aaattcatat
    42721 ccttccgttg gccagtagcc gacgaacttc acgcctttgg tcaagagttt gtcatgcagc
    42781 ataccgagcg catcgaggaa ccactcgccg tatcccagtt gatcgccaag cccatacagc
    42841 gcaacaattt taccttcaag gttcaggtcg tcgagctgat cccagacggc ttcccagtct
    42901 tcctggattt caccaaaatc ccaggtcggg atacccagaa tgagcacatc gtactgctcc
    42961 attaatttcg gggagtcgtc cttgaggtta tgtaaggtca ccagttctgg gccgataata
    43021 tcgcggattt tttctgccgc catttcggtg taacaggtgc tggaaccgta aaaaagaccc
    43081 atattcataa cgtaagcttc tcgattctgc tgtggctttt gcagctagtg tatcagaatc
    43141 gctttagtca cggcacaata aggcataatg gatcaaatga gtgaccataa ggggcgcaag
    43201 tgaaacagga tctggcacgc atcgagcagt ttcttgatgc tctgtggctg gaaaaaaatc
    43261 tggctgaaaa tacgttgaac gcttaccgtc gcgatctgtc aatgatggtg gagtggttgc
    43321 atcaccgcgg gttgacgctg gcgacggcgc aaagtgacga tttgcaggca ttactggcag
    43381 aacggctgga gggcgggtat aaagccacca gctcagcgcg tttgctgagt gcagtgcgcc
    43441 gattgttcca gtatctttat cgcgaaaagt ttcgtgaaga cgatcccagt gcgcatctcg
    43501 cttcaccgaa attgccacag cgtttgccaa aagatttaag cgaagcgcag gtcgaacgtt
    43561 tattacaggc accattaatt gatcagccac tggagctacg cgataaagcc atgcttgaag
    43621 tgttgtatgc taccgggctg cgtgtctctg aactggtcgg actgacaatg agtgatatca
    43681 gcctgcgtca gggcgtagtg cgggtcattg gtaaaggcaa caaagagcgc ctggtgccgt
    43741 taggtgaaga ggcggtttac tggctggaaa cgtatctcga gcatgggcga ccgtggttgt
    43801 tgaacggtgt ctctattgat gtgttgttcc ccagccagcg tgcgcagcag atgacgcgac
    43861 agaccttctg gcaccgcatt aaacattatg ccgtgctggc gggtatcgac agcgaaaagc
    43921 tgtcaccgca tgtgttgcgt cacgcttttg ccacccattt attaaatcat ggtgcggatt
    43981 tacgcgtggt gcagatgcta ctgggccaca gcgacctctc caccacgcaa atttatacgc
    44041 atgtcgctac cgagcgtctg cggcaacttc atcaacagca tcacccgcgg gcgtgatgtc
    44101 tgaaaagaac gggaagattt atgaagaaag gttttatgtt gtttactttg ttagcggcgt
    44161 tttcaggttt tgctcaggct gatgacgcgg caattcaaca aacgttagcc aaaatgggca
    44221 tcaaaagcag cgatattcag cccgcgcccg tagctggcat gaagacagtt ctgactaaca
    44281 gcggcgtgtt gtacatcacc gatgatggta aacatatcat tcaggggcca atgtatgacg
    44341 ttagcggcac ggctccggtc aatgtcacca ataagatgct gttaaagcag ttgaatgcgc
    44401 ttgaaaaaga gatgatcgtt tataaagcgc cgcaggaaaa acacgtcatc accgtgttta
    44461 ctgatattac ctgtggttac tgccacaaac tgcatgagca aatggcagac tataacgcgc
    44521 tggggatcac cgtgcgttat cttgctttcc cgcgccaggg gctggacagc gatgcagaga
    44581 aagaaatgaa agctatctgg tgtgcgaaag ataaaaacaa agcgtttgat gatgtgatgg
    44641 caggtaaaag cgtcgcacca gccagctgcg acgtggatat tgccgaccat tacgcacttg
    44701 gcgtccagct tggcgttagc ggtactccgg cagttgtgct gagcaatggc acacttgttc
    44761 cgggttacca gccgccgaaa gagatgaaag aattcctcga cgaacaccaa aaaatgacca
    44821 gcggtaaata attcgcgtga aacaacagat acaacttcgt cgccgtgaag tcgatgaaac
    44881 ggcagacttg cccgctgaat tgcctccctt gctgcgccgt ttatacgcca gccggggcgt
    44941 gcgcagtgcg caagaactgg aacgcagtgt taaaggtatg ttgccctggc agcaactgag
    45001 cggcgtcgaa aaggccgttg agatccttta caacgctttt cgcgaaggaa cgcggattat
    45061 tgtggtcggc gattttgacg ccgacggcgc gaccagcacg gctctaagcg tgctggcgat
    45121 gcgctcgctt ggttgcagca atatcgacta cctggtacca aaccgtttcg aagacggtta
    45181 cggcttaagc ccggaagtgg tcgatcaggc ccatgcccgt ggcgcgcagt taattgtcac
    45241 ggtggataac ggtatttcct cccatgcggg ggttgaacac gctcgctcgt tgggcattcc
    45301 ggttattgtt accgatcacc atttgccagg cgaaacatta cccgcggcgg aagcgatcat
    45361 taaccctaac ttgcgcgact gtaatttccc gtcgaaatca ctggcaggcg tgggtgtggc
    45421 gttttatctg atgctggcgc tgcgcacctt tttgcgcgat cagggctggt ttgatgagcg
    45481 tggcatcgca attcctaacc tggcagaact gctggatctg gtagcgctgg ggacagtagc
    45541 ggacgtcgtg ccgctggacg ctaataatcg cattctgacc tggcagggga tgagtcgcat
    45601 ccgtgccgga aagtgccgtc cggggattaa agcgctgctg gaagtggcaa atcgcgatgc
    45661 gcaaaaactc gccgccagcg atttaggttt tgcgctgggg ccacgtctca atgctgccgg
    45721 gcgactggac gatatgtccg tcggtgtggc gctgttgctg tgcgacaaca tcggcgaagc
    45781 gcgcgtgctg gcaaatgaac tcgatgcgct aaaccagacg cgaaaagaga tcgaacaagg
    45841 aatgcaagtt gaagccctga ccctgtgcga gaaactggag cgaagtcgcg acacgctacc
    45901 cggcgggctg gcaatgtatc accccgaatg gcatcagggc gttgtcggta ttctggcttc
    45961 gcgcatcaaa gagcgttttc accgtccggt tatcgccttt gcgccagcag gtgatggtac
    46021 gctgaaaggt tccggtcgct ccattcaggg gctgcatatg cgtgatgcac tggagcgatt
    46081 agacacactc taccctggca tgatgctgaa gtttggcggt catgcgatgg cggcgggttt
    46141 gtcgctggaa gaggataaat tcgaactctt tcaacaacgg tttggcgaac tggttactga
    46201 gtggctggac ccttcgctat tgcaaggcga agtggtgtca gacggtccgt taagcccggc
    46261 cgaaatgacc atggaagtgg cgcagctgct gcgcgatgct ggcccgtggg ggcagatgtt
    46321 cccggagccg ctgtttgacg gtcatttccg tctgctgcaa cagcggctgg tgggcgaacg
    46381 tcatttgaag gtgatggtcg aaccggtcgg cggcggtcca ctgctggatg gtattgcttt
    46441 taatgtcgat accgctctct ggccggataa cggcgtgcgc gaagtgcaac tggcttacaa
    46501 gctcgatatc aacgagtttc gcggcaaccg cagcctgcaa attatcatcg acaatatctg
    46561 gccaatttag cgtcatcttc tctataaaaa agagcgtgga ttgggtacaa tcccgctctt
    46621 atcaccgcat tttgactagc tcaataaaag aaatcagacc atgtttgaaa ttaatccggt
    46681 aaataatcgc attcaggacc tcacggaacg ctccgacgtt cttagggggt atctttgact
    46741 acgacgccaa gaaagagcgt ctggaagaag taaacgccga gctggaacag ccggatgtct
    46801 ggaacgaacc cgaacgcgca caggcgctgg gtaaagagcg ttcctccctc gaagccgttg
    46861 tcgacaccct cgaccaaatg aaacaggggc tggaagatgt ttctggtctg ctggaactgg
    46921 ctgtagaagc tgacgacgaa gaaaccttta acgaagccgt tgctgaactc gacgccctgg
    46981 aagaaaaact ggcgcagctt gagttccgcc gtatgttctc tggcgaatat gacagcgccg
    47041 actgctacct cgatattcag gcggggtctg gcggtacgga agcacaggac tgggcgagca
    47101 tgcttgagcg tatgtatctg cgctgggcag aatcgcgtgg tttcaaaact gaaatcatcg
    47161 aagagtcgga aggtgaagtg gcgggtatta aatccgtgac gatcaaaatc tccggcgatt
    47221 acgcttacgg ctggctgcgt acagaaactg gcgttcaccg cctggtgcgt aagagcccgt
    47281 ttgactccgg cggtcgtcgc cacacgtcgt tcagctctgc gtttgtttac ccggaagttg
    47341 atgatgatat tgatatcgaa atcaacccgg cggatttgcg cattgacgtt tatcgcgcgt
    47401 ccggcgcggg cggtcagcac gttaaccgta ccgaatctgc ggtgcgtatt acccacatcc
    47461 cgaccgggat cgtgacccag tgccagaacg accgttccca gcacaagaac aaagaccagg
    47521 ccatgaagca gatgaaagcg aagctttatg aactggagat gcagaagaaa aatgccgaga
    47581 aacaggcgat ggaagataac aaatccgaca tcggctgggg cagccagatt cgttcttatg
    47641 tccttgatga ctcccgcatt aaagatctgc gtaccggggt agaaacccgc aacacgcagg
    47701 ccgtgctgga cggcagcctg gatcaattta tcgaagcaag tttgaaagca gggttatgag
    47761 gaaccaacat gtctgaacaa cacgcacagg gcgctgacgc ggtagtcgat cttaacaatg
    47821 aactgaaaac gcgtcgtgag aagctggcga acctgcgcga gcaggggatt gccttcccga
    47881 acgatttccg tcgcgatcat acctctgacc aattgcacgc agaattcgac ggtaaagaga
    47941 acgaagaact ggaagcgctg aacatcgaag tcgccgttgc tggccgcatg atgacccgcc
    48001 gtattatggg taaagcgtct ttcgttaccc tgcaggatgt gggtggccgc attcagctgt
    48061 acgttgcccg tgacgatctg ccggaaggcg tttacaacga gcagttcaaa aaatgggacc
    48121 tcggcgacat cctcggcgcg aaaggtaaac tgttcaaaac caaaaccggc gaactgtcta
    48181 tccactgtac cgagctgcgt ctgctgacca aagcactgcg tccgctgccg gataaattcc
    48241 acggcttgca ggatcaggaa gcgcgctatc gtcagcgtta tctggatctc atctctaacg
    48301 atgaatcccg taacaccttt aaagtacgct cgcagatcct ctctggtatt cgccagttca
    48361 tggtgaaccg cggctttatg gaagttgaaa cgccgatgat gcaggtgatc ccaggcggtg
    48421 ccgctgcgcg tccgtttatc acccaccata acgcgctgga tctcgacatg tacctgcgta
    48481 tcgcgccgga actgtacctc aagcgtctgg tggtcggtgg cttcgagcgt gtattcgaaa
    48541 tcaaccgtaa cttccgtaac gaaggtattt ccgtacgtca taacccagag ttcaccatga
    48601 tggaactcta catggcttac gcagattaca aagatctgat cgagctgacc gaatcgctgt
    48661 tccgtactct ggcacaggat attctcggta agacggaagt gacctacggc gacgtgacgc
    48721 tggacttcgg taaaccgttc gaaaaactga ccatgcgtga agcgatcaag aaatatcgcc
    48781 cggaaaccga catggcggat ctggataact tcgactctgc gaaagcgatt gctgaatcta
    48841 tcggtatcca cgttgagaag agctggggtc tgggccgtat cgttaccgag atcttcgaag
    48901 aagtggcaga agcacatctg attcagccga ccttcattac tgaatatccg gcagaagttt
    48961 ctccgctggc gcgtcgtaac gacattaacc cggaaatcac agaccgcttt gagttcttca
    49021 tcggtggtcg tgaaatcggt aacggcttta gcgagctgaa tgacgcggaa gatcaggcgc
    49081 aacgcttcct ggatcaggtt gccgcgaaag acgcaggtga cgacgaagcg atgttctacg
    49141 atgaagatta cgttaccgca ctggaacatg gcttaccgcc gacagcaggt ctggggattg
    49201 gcatcgaccg tatggtaatg ctgttcacca acagccatac catccgcgac gttattctgt
    49261 tcccggcgat gcgtccggta aaataagcat tacgttatgc tcacaacccc ggcaaatgtc
    49321 ggggtttttt aattgtgctg cgcgaaagca gacaacaatt ttcttgcttc actattggct
    49381 gcctgcatca ccatccacgg actgaacgcc cacggtgtgg catcaatacc gtgtaataca
    49441 tctgctaaat cacaccattg ataatccatc acttcatcat cgttgatctg taacgcactg
    49501 gtggtgcgtg cggcaaatac cggacacact tcattttcca caatgccatt cggatcggtg
    49561 gcgcgatagc gaaagtcagg atagatagat tcaggaggcg taatttccac gccaagctca
    49621 taacggcaac ggcggatcac cgcgtcttcg ttgctttctc ccagttgtgg gtgcccacaa
    49681 accgagttag tccacacgcc aggccacgct tttttgctca gtgcgcggcg ggtaactaat
    49741 aattgtcctt tggcattaaa cagccaactg gagaacgcga gatgtaagcg ggtgtctgcc
    49801 gtgtgtgcgg catacttttc cagcgtaccc gtgggaactc cctgtgcatt caataaaatg
    49861 acgtgttccg tttgcataat ttctcacatg taattctgat cactcatcat tatagataat
    49921 tgaagagtga aatgattaac caagtgagcg tttatcgaca accgcccgtt ttgagcggat
    49981 gccgacaggt aaaaaccatt taaaaaagta gcatcatata tttgaagcga ctttcaatgg
    50041 ccattgcaac acagtcagaa atgacaggaa tagagagagt aaaaagcaac agcagactga
    50101 atatagcgcg cattaaaaaa ttcatattat tctccatgct catttttctt cagcttgcgc
    50161 atcagaagcc acatacgtac tgtcctgact tttaaatctt tatcagagac ggattccttc
    50221 accaggtcag catgatgctg gtagccatta aagaagacat tcagcacaac ggcgctaagg
    50281 gttgcgagca taatgccgct atgcagcaac ggttgcagta cggccggtaa cttagaaaag
    50341 aaatcgtgag agagcgtcgg agtcatgcca acgccgagac tgatcgccac aatatagagg
    50401 ttgtaacggt tggtggtgta gttacagcgc gacagaattc gaatccctgt cgccagtacc
    50461 atgccgaaca tcaccagccc agcaccgccc agcacaaatt gcggaatgga ggcgaccagc
    50521 accgccattt ttggcaccat gccaaacagg attaatataa ttcccgaaga aatacacacc
    50581 cagcggctat gaacgcgcgt cacgctaacc aggccaacgt tttgtgaaaa tgacgtgtgg
    50641 gggaagctgt taaacgttcc gcctatcatt gtccctacgc catcgacacg cagcccgcga
    50701 ataatatcgt gtgaagagag tttacgaccg actatttcac ccagtgccag gaacatcccc
    50761 atcgactcga taaacacgat gattaacacg gcagtcatgg tcagaatgga tacgggatcg
    50821 aaaatcggca taccaaatga catcggcgtg acaatcgcaa accatgaagc atcatgtagc
    50881 ccggataaat tgacttcatt catcatccac gaaagtaaaa agccaaatac aatccccagt
    50941 aatacggcga cgttggacat aaatcctttc gcatagcgag taatgagcaa gataaaaatt
    51001 aagacagcaa aggagatacc taaataaacg ggattaccat attgcggatt ccctttacct
    51061 ccggcggccc agtcaatacc cacctgaatg atgctaagcc caatagaagt aataaccaca
    51121 ccggtaacca gtggcgggaa taaaggcatc aagcgaccaa taagtggcgc taataatgtg
    51181 gtgataaaac ccgcggcgat agtggcacca aatatcccca gcaggccgat atccgggttc
    51241 atcccaatgg ctatcattgg tgttacagca gcaaaggtca ccgacataat caccggcagg
    51301 cggatcccca taaagcggcc gataccgata cattgcaata atgtgacgat cccgcagcaa
    51361 aagagatccg agctaatgag catcgcaata gcttcttttg agaggcccag tcggtcacca
    51421 atcataagag gaacagcgac tgcacctgcg tacatgacaa ggacgtgttg cagaccgagt
    51481 atgatcagct ttcctggtga taatatgcgg tcaacctcat cagttgggcg gtcttgccca
    51541 gaagatgagg gaagttggga atctatggcg ctcatcagtg tttctccttt cgcccgccag
    51601 agtaaaaagc aaccgtttac gttaatgaaa ctgtctaaac acatgctcgt ggagtgccag
    51661 tttttgcgag gaaggggagt tagagacagg aattgcggag gcaatcacat aatcgtggtt
    51721 aaaccacgaa aatgagaaga gaacctgaca atgaaattat ctgtaatttt ctcatattga
    51781 tatttcatta atcattctgg catgtcgcac tctcgcattt aatcgttttt atctggatag
    51841 cgctcttttg gtcggcaatg ttgaaataat gaaagcggca tagattgagg ggcaataatt
    51901 tgaactcagt cgcaaaatta taattaaaac ggtcatgcta cctaatatat gcccgtttat
    51961 tgcatcgcga aatttgagaa gacataactc attaaatgaa agggatgcaa atgaataagt
    52021 ttatcgctgc tgaagctgcg gaatgtatag gctgtcatgc ttgtgaaatt gcctgtgcgg
    52081 tggcacacaa tcaagaaaac tggccgctga gtcacagtga ctttcgaccg cgtatccacg
    52141 ttgtagggaa aggccaggct gcgaatccgg tggcctgcca tcactgcaac aatgcccctt
    52201 gtgttacggc ttgtccggtt aatgctctga ctttccagtc cgatagcgta caactggacg
    52261 agcaaaaatg tattggctgt aaaagatgcg caatcgcttg cccctttggc gtcgttgaga
    52321 tggtcgatac gattgcgcag aaatgcgacc tttgtaacca gcgcagttcc ggcacgcaag
    52381 cctgtattga agtctgccca acacaggcgt tacgactgat ggacgataaa gggttacagt
    52441 ggataaaggt ggctcgccag cgcaaaacgg cagcaggaaa agcgtcatca gacgctcagc
    52501 catctcgcag tgcagcgttg ctccccgtta actcgcgtaa aggcgcagat aaaatttcag
    52561 cgagtgaacg gaaaacccac tttggcgaaa tctattgcgg gctggatcca ctgcaagcga
    52621 cttatgagag tgaccgctgt gtttattgtg ccgaaaaagc taactgcaac tggcattgcc
    52681 cgctgcataa cgctattccg gattacatcc gtctggtaca ggaaggaaag attattgaag
    52741 cggcagaact ttgccaccag accagttcct taccagaaat ctgcggcagg gtatgcccac
    52801 aggaccgtct ttgtgaaggc gcatgtactt tgaaagatca ctctggcgca gtctctatcg
    52861 gtaatctgga acgctacatc accgataccg cgctggcgat gggctggcgt cccgatgtca
    52921 gcaaagttgt tccccgtagc gaaaaagtgg cggtgattgg cgctgggcca gcagggttag
    52981 ggtgtgctga tattctggcg cgcgcgggag ttcaggttga tgtctttgat cgccatccag
    53041 aaattggcgg tatgctgact tttggcattc ctcctttcaa actcgataaa acggtattaa
    53101 gccagcggcg agagatattc accgcaatgg gaatcgactt tcatcttaac tgtgaaattg
    53161 gccgcgatat tacctttagc gatttaactt ctgaatatga tgcagttttc atcggcgtgg
    53221 ggacttacgg gatgatgcga gcagatctgc cgcatgaaga tgcacccggt gtcattcagg
    53281 ctctaccgtt cctgactgcc catacccgcc agctcatggg attgccggag tctgaagagt
    53341 atccgctgac ggacgtggaa ggtaagcgag tcgtggtatt gggcggtggc gatacgacaa
    53401 tggattgttt gcggacttcc attcgcctca atgctgccag cgtgacctgc gcgtatcgtc
    53461 gtgatgaagt cagtatgccg ggctcgcgca aagaggtggt taatgcgcgc gaggaaggtg
    53521 tcgagtttca gttcaatgtt caaccgcaat atatcgcttg tgacgaagat gggcgtttaa
    53581 ctgcggtggg cctgattcgt accgccatgg gtgagccggg gccggatggt cgccgtcgtc
    53641 ctcgtccggt agcgggttca gagtttgaat tgcccgccga tgttctgatt atggcctttg
    53701 gtttccaggc gcatgccatg ccgtggttgc agggcagcgg aattaaactc gataaatggg
    53761 gcctgattca aaccggtgac gtcgggtatt tacctaccca gacgcatctg aaaaaagtct
    53821 ttgctggtgg tgatgcagtt catggcgcgg atctggttgt cactgcaatg gccgcaggaa
    53881 ggcaggcggc gcgcgatatg ttaactctgt ttgatacgaa ggcatcgtga tgaaatcgtt
    53941 aattatcgtt aatccggctg actgtattgg ctgccgtact tgtgaagtag cctgtgtggt
    54001 cgctcaccct tcagaacagg agttgaatgc cgatgtcttt ttaccccggc tgaaggtaca
    54061 gcgactggac agcatcagtg cgccggtgat gtgccatcag tgtgaaaacg ccccttgtgt
    54121 tggcgcttgc cccgtggggg cgctgacgat gggcgagcag gtggtgcaga ccaattctgc
    54181 ccgttgtatt ggctgtcaga gttgcgtcag tgcgtgcccg tttggaatga tcaccattca
    54241 gtcgttgccg ggggataccc gacaacaaat tgtgaaatgc gatctctgtg aacagcggga
    54301 agaggggcct gcctgcgttg aatcttgccc aacacaggcg ctgcagttgc ttactgaaag
    54361 agaactcagg cgagtccgcc agcagcgtat tgttgccagc ggtgagaatc ctctgtgaaa
    54421 gaaatctccg cgctgaaagg cgcggagaat ctattagatt gcccaaccac ccgcgtaaaa
    54481 tgcgaccagt gcggcagtaa tgatcaccgt accaatattc agcttttgcc attcgcgtgc
    54541 aaagacgcgg cctacgacca gtgtcacaaa gcccagcata ataccggtaa cgatattaca
    54601 agtcagaacg atgaacacgg cacacaccag gccagccata gcgtcaataa aatcattgaa
    54661 atccagcttc gagacgttac ttaacatcag caaacctacg tacatcagag cgggtgcagt
    54721 ggcgtaacca gggatcaaaa atgacagcgg tgataagaac agaatcagca ggaataacgc
    54781 ccccactacg gttgcggtta accctgtttt acccccggcg gcggttcctg ccgctgattc
    54841 gatataaacc gctgcgggcg ctgcgcccac caggccggag aatattgaac ttactgagtc
    54901 actggtcagg gctttgccgc cgttgatgat ctggttgtct ttatccaaca aattcgcctg
    54961 accggcgacg gcacggatgg tgccagtggc gtcgaacact gcggtcatca ccaatgccag
    55021 tacactcgga agtacggttg gctggagtgc gcccataata tcgaggctga aaatcagaga
    55081 cttaccatct tcgccagtca gacttggcat cgccaccaga ccgtggtatt tcaccgctgg
    55141 gtcaaagatt aagccgataa tcgaaattgc gataatcacc aacaagatcc cgccgggtac
    55201 gcggcacttc tccagaccga agatgaccgc cagccccagc aagctcatca tcaccgggaa
    55261 ggaggtaaac gcaccgagcg ccactggcaa gccttcaatc gggtttttga taaccatacc
    55321 cacaccgtta gcagcaatca gcagcagaaa caggccgata ccgatacctg taccgtgagc
    55381 gatacccatc ggtaaattac gtaagatcca ggtacgcaca ccggttacgg aaatagcggt
    55441 gaagatgacg cccatcagaa agaccgcgcc cagtgcgaca ggaacgctaa tttgttgccc
    55501 gagtaccaga ctgaatgcgg taaatgccgt caaggaaatc gcacaaccaa tcgccattgg
    55561 caaattggcc cacaacccca tcagcaacga gccgaagccc gcgaccagac aggtggcaac
    55621 aaacacagct gcgggaggaa aacctgcttt gcccagcatt cccggaacga cgataacgga
    55681 ataaaccatg gccagaaagg tcgttaagcc agccagtact tcctgacgaa cggtactgcc
    55741 acgagcggta attttaaaat aattatccag cgcgccctgt ggctttggtg cgtccggtgt
    55801 ttgtaggatg tctccagaca taatgatgtc ctcacgagga tgttaaagtt ttattattag
    55861 ttgcgttcgt acaccagacg accatcaacg taggtgcggt agatcgaacg gtcatcgccc
    55921 aacgtcatca tcacgaacaa tttgtcgact aaagaaacag agttgtcata gcgcagctgc
    55981 tgtagcggag tggcggtggg ttccatcacc acgaaatcag cctctttgcc aggtaaaaag
    56041 ttgccaatca aatcgtcaag gcccagagat ttcgctccgc cgagcgtggc caggtaaaac
    56101 gcttcatatg ccgagaggcg atagccttgt aattgcaata ctttgtaggc ttcgttcagc
    56161 gtttgcagca tgttgaaagt ggttccggca ccgatatccg ttcccatgcc cactttaact
    56221 ttcttctgcc atgctttttt caagttgaat aagccgctgc cgaggtaaag gttggaggtc
    56281 ggacagaaag caatgctgga tttggtttcg ctgagacgat cccactcttt ttcttcgaga
    56341 tggacgcagt gagcaaagac acagttttta ccggtcaggc cgtactgatg gtaaacatcc
    56401 agataaccat catggtcagg ataaagcgat ttcacccagg caatttcatc tttgttttca
    56461 cagagatggg tatgtaccca cgtatccgga tattcttctt tcaggcgttg cgccatcgcc
    56521 atctgttcag gagatgaggt cggggcgaag cgtggcgtaa tcgcatatag cagacgacca
    56581 tttttgtgcc agcgttcaat cagttctttg ctttggtgat agctgctttc ggcagtgtcg
    56641 agcagataat ccggtgcgtt gcggtccatc atcaccttac cggcaatcat acgcatattg
    56701 atatgactgg cggcttcaaa cagcgcatca acagattgcg gatgaacagt gccaaacacc
    56761 agcgccgtgg tggttccgtt acgtaaaagc tgcttgatga agaatgccga catttcgcgg
    56821 gcgtactcta aatcctcata acgacgttca gtagggaagg tgtgtttatt caaccactcc
    56881 agcaattgtt caccataggc ccccaccatt tcactttgcg gataatggat atgtgtatcg
    56941 acaaagcccg gtactatcag tttgccgcga tagtcgcgca cgcgaatagt gtcaggaatt
    57001 tgatgctttc cgtcttccca ttcgccaaac cattccactt ttccctgttt aatgagtaat
    57061 aaaccatcct caataaaccg cagcgcagag gcaatctctt ccgggttatc gaccgtacgg
    57121 gtgacatcaa taaaactgcc tcgtaccgct ttcaacgtgt gttctcctga catcattgac
    57181 tcctttactg ttaatccatc tcttccgctg aggtaatacc aggcagaacg ttttcctgtc
    57241 ggtagccacc agggaggata atatttaata aaatcgcagt taacccgcca gcacaaatag
    57301 ggttttcaac tagtacataa atagaggctg gcaatatttt aaaaatttcg ggatcgtagg
    57361 agacgccaag tcctaaacct aaagaagtgg cgacaataag tgtttctcgg cgctttaaac
    57421 cgttggtgat gattatgcga atcccagcga tggcaatcat ggaaaacatc aacgtcattg
    57481 cgcctcccag aactgccgag ggaatggtcg tgaagaagcc gccaatcatc ggaaacaaac
    57541 cgaggataac cagcattacc gcgatggttc gcccgacata acgtgaagcg acgccagtca
    57601 tctgaataac cccattattt tgcgcaaacg tggttaaggg taatgacccg acagcggagg
    57661 cgataacaga aaccagaccg tctgccagca cgccgccttt cagtcgggac tgatactctt
    57721 ctccctgaat gggtcggcgg gaaaccattg ccgtggcggt gatatcgccg acagcttcca
    57781 gcacgctaag cagataaatc gtgccaacca ccaggaactg atggaagcta aaactaaagc
    57841 cgtatttgaa cggatgcggg atggtgatta acggcaaatt gcgcatactg ctgaaatcca
    57901 ccatgcccag gcataacgat gcgatatagc cgacacatag cccaatggcg atccctccca
    57961 tgcgtagcaa cggactgcga cagcagttaa agccgatcac cacaattaaa accaataaac
    58021 caacgccgag atgttcgtaa ttgccgaatg taccgctgct tttggctgca aatcctccac
    58081 caaaatcgat aatgccgact ttaatcaggc ttaagccgat catcagtacc acaataccgc
    58141 tgacggtagg cgtaataacc cgacgtaaat agggcaagat aaatgaagat ccgacaacca
    58201 gaaatgcgcc aacgaaggag acgccgagaa gcgacgacat gattaactct tcgtgaaaac
    58261 cgtcgctttt catgctgctg cccagcgcaa tcatgaccgt aacaaatgaa aaattgactg
    58321 actgaattga gagtaggcca gaaccgacga tgccgtagcg gtttacttgt aaccaggtac
    58381 caataccaga ggcgatcatc gccatagaaa caagataggc agttgtttca gcggaaagct
    58441 gtaaggccgc ccccacgatt aacgcggggg ttaccatcgg aacgaaaatt gccaacagat
    58501 gggtaatggc accaacgaga gcctgatgaa agggagggcg atcctccagt tcaaatataa
    58561 ggtcagaacc tgcattgttt atatcagaca tcccttcact ccttttaaag taaatttgat
    58621 catctgaatt agtaaaataa attcccacga atttggggcg caggacgcct tgagaacggc
    58681 ttatctcatt ttcgcagtca ctatttagtc atcgttcaaa cagagaaaca ggccgccgaa
    58741 gcggccattt attacttata ttttttccag cgcggtgagt attttctccg gtgtgaaatg
    58801 ccattcgcgt aaccagatgc cgcaggcatc gtgaattgcg gtagcaatcg ccggagctgc
    58861 gccatttaca ccaatttccg agatcgattt cgccccgaac gggccgactt tatcgtcgct
    58921 cggcaccaac acagcgcgga aatcacgcgg aatgtcacca attttcggtg cgccgtaact
    58981 gcgtaaatca cgcgttaacg ggtgaccttc ggcgttataa atgatctctt cgctcatact
    59041 gtggccgata gcacgcaggg tggcaccgta gatttgtccc aacgctaact ctggattgac
    59101 cggtgtaccg cagtccagca aggcgtagaa tttatccagg cggatttcac ccgtacgcgt
    59161 gttgacggca acttcagcga agtttgcgcc atacgggaaa gcgaaatcag gcgtgatata
    59221 actgccagtt cccaccagtg aaccaaagcc ggtgccggtt tcgcctttat gggcaatatc
    59281 cccgaaacta acttcgcctt tcttgccgcg cacgacgccc ggcgttgcta gttgaacatc
    59341 tgccactggc tcacccaaca tttgcgcgcc gtggaacaga attttctccc gcagattttc
    59401 cgctgccaaa cgcgccgcgt tacccgagaa gcaagtaccg gacgaggcat atgcgccttt
    59461 atcaaacaac gcatgatcgg tatcaccgga gataacatgc acgtcctgcg gtgggcagtg
    59521 cagcacttct gctgccagtt tcgtcactac agtatccaga ccagtaccaa tatccgcacc
    59581 gccagaatga acgataaagg tgccgtccga ttccagtttg atcatgcagt tagcctgatc
    59641 gatatccggg atacccgatt tctgcatgat aatggcgacg ccgcgaccga tgtgccagtc
    59701 accattttgc ggtttcggtg aagaccattg gatcatctcg cgaccctgac gcaggatctc
    59761 ttccagtgcg cagctggcgg cggaaggaac ggaggtcggc gctttacctt caccgattgc
    59821 accgagaatt ttcagctctt gcccttcgtg tacccggtta cgttcgataa tttccagttg
    59881 gtcgatctgt aactgttcag ccagttccgc taatgccatg gtgatagcga agttaccttt
    59941 cggtgcgcca taaccctgat aagcaccatt tgggcaaatg ttgctgtagt aggtggtgac
    60001 ctggaaatcg acgttatcgc acggatataa cggcagcgac agcgccggtc cgttacacgg
    60061 tacggtgagt gagtggttgc cgtaagggcc agtgttggcg cggaaatcca tcttcactgc
    60121 cgtcaggcga ccatcttttt tcgctcccag tttgacggtg actttcgcga cgtgacgaga
    60181 ggtgttagca ataaactctt cttcacgggt gtagcggaac agtaccggac gcccggtcac
    60241 gcaggttgcc catgcgcaca cttcttccag caggatgtcc tgtttggagc caaaaccgcc
    60301 gccaactcgc tctttaatga catgaacttt atgctgtttc atgcctacga ggcgcgcgac
    60361 ctggcggcgt aagtgccatg gtacctgggt ggaggcgtgg ataaccagac gatcgccgtc
    60421 catccgggta aagcagatat gtgtttcagt cgggcactgc tgtgcctgcg ttgagttata
    60481 ggttcgctca atgatcacat cggcatcggc aaagcctttg tccatatcgc caatatgacc
    60541 atgaatactg gcggcgatat ttttgcgagg gcgagaaccg atcgggaagt tgatgatcat
    60601 atgctcgccg cgctgggctg catggctgtt atcgtcttcc agagtatctg gcgcaccagc
    60661 aacatacacc accggttcat cgtgcacgac aggcgcatct tccgccattg cttcgtcgat
    60721 cgacattacc ggcttaagca cttcatattc aacgtcgatg agcttcaatg cttcgagcgc
    60781 aatttcttca ctttctgcga cgaccgcagc aacacgatcg ccgacgtgac gcattttctt
    60841 gccgaacata cggcggtcaa gcggtgacgg ttccggtgcg ctctgaccac ccggggtata
    60901 gtagatatcc gggcaattca ggtgagtaat aacgtgaacg acgcccggta aggcttcagc
    60961 tttgctgaca tccagatgag taatcagtgc gtgagcgtgt gggctacgta acattttaat
    61021 gacgcaggcg tcagccgtta cgcggtcttc aacatagcag ggttttgcct gcaccatttt
    61081 cgcggcatca gttttaggat aatgcttgcc aatgacttca aggtcgtcac ggaaagtcgg
    61141 agcgatatca atggtggcct gcggattatt tttacgtgca accgccagtt caatgacctg
    61201 atagtattgt tgccagcctg catcgcggct gaacaaacca gaaagcgcgt cgtcgatctc
    61261 ttcgcgggta ggtgcggcga tgcgatcgag aagatcggtg ataatcagag ctgcagctgg
    61321 atcgttataa ccagactgca ccacgccaac atcaaccatt gcctgttgaa ccagacttaa
    61381 ctcgttccat ttgcccaaag attctgcggt acgaatatct gccttctcta actgtgcggc
    61441 aataagcaag gacgcgttaa cgatattacc gttaaagatt attgcgtcag aaccggcaaa
    61501 cccgaagcca tcatcactgt tgcgtacaga gtgcattccc atgttaaaca acagcttttg
    61561 cacgttttcg cctggattaa cggttagctc ctgaggcgcg ccatttaaag taaagtggat
    61621 gatcatacgg cttcctcccc agcctgttgg cagtcggcat acaggtcggc taccagaact
    61681 cccgtgatat agcgtttata ggccacgctg ccccgcaaat cttcctgcgg gaaaatggcg
    61741 ttggcgacag cctgttcaag tgcattgcct tccagatttt gtttttcgac atcatgcaga
    61801 cgcagtgctt tactggcgac gccatccagc gcaattcgca taccgtcgtg gtctgtcatt
    61861 gcaacggctg ccgtcacgac ggttaaacct gcctgagaac ggctaatttt gcgggtcgca
    61921 caggtgcgat acggatcttt aatgataatt tcggttagca ggcgatcgca tgggcaggcc
    61981 aggtagtcct cgattgacag cgtttcgccg ttgccaaaaa ccagttcagc atccagtgcc
    62041 aacaggacgg gaagcagcac cgactcttcc tggcgggcgg cgatttcacc accaatggtc
    62101 gactgattac gaacatggcg tgagtaaaca aaaccgaggg cttcacgcag cgctgcagga
    62161 ataaatcgcg catcacgcag tggctgcaag cgagacattg cgccaatccg cagtgcaccg
    62221 ttatcccagt caacccagtc cagttccaga tcctgtaagg aaatggcaat ctttttatcg
    62281 gtacgggttg gtgtagcatt gagtttgctg cccccggcga accagacggc ttcatcctgg
    62341 tagcggcgct tcagttccag cgcctgttcg acagagtcgg gcctgaaaaa ttgttcaatc
    62401 atcttctttc cttatttaac cctcttccct gcgggaagag ggcatctgtc atttatgcca
    62461 gcgcatccat ccgacgccac atactggcag cggcttttct ggcttgtgca taaatggaat
    62521 cgcaatcgaa gttaaactga cggtcttcat agaccatcac accattgacc atcacgctgt
    62581 gaacgctgcc tgagcccata ccgaaagcga tatgcccggc gatattgtct gccagcagcg
    62641 gcgtcggtga gttgtaatcg caaatggtta aatcagcttt gtaaccggct tccagaagtc
    62701 caaatttcgc gccaaagttg cggctcatca gttcgttacc gttagtcagg gctttggcaa
    62761 aactgtcagg ccacagcgga ccacccgcat cgcgatgttt aaagaaggca aatttcatct
    62821 cttcaaacat gtccgaacca atgccgtccg ttcccaacgc cagattgcgg atgtcgctaa
    62881 ggtgatggtt gtagccgaca tggttgttca tgtttgaacg ggcgttatgc accaggaacg
    62941 catcgcgctg attgagtagg gcgatgtcat ctttcgacaa gtacagccca tgagcgacca
    63001 gcgttttgct atcgatgaga tcgaattgcg ctagtcgtgc cagcaggtct ttgccgtacc
    63061 agtggtgact gtaggaaacg tcgtaaaggt cttccgcagc gtgaatatgc aaaccacggc
    63121 ctgtggcttt cacggcttca cgtagcatct ccagaccggc atctggcacg gtaaacggcg
    63181 cgtgagcacc gatatgtgct tccaccagat acggctcggt tgctgctttc ttcgcctcat
    63241 caatctgacg ggcgaagcgg atgttttctt ctacaccttc ctgcaactct ttgatgccgt
    63301 tgttacggtc agtagtttca aaacaggtca tcgcgcgcag gccaactttt aaaaatgcgt
    63361 cgcgcaatgt ggagagcgac ccgccgatat acgccggaga ggcatggtga tcgataaccg
    63421 atgtacatcc gctcttaatc gcttccaggg aacaaatcag cccgctgtaa tagagcgact
    63481 cttcatcaag ggcgcgatcg agccgccacc agagattttt cagcgttgag atgaaatccg
    63541 ggcagggggc gatgtttgcc ataattccgc gggaaagccc cgagtaaaaa tggttgtgcg
    63601 agcagacaat tcccggcatc acaatccgac catgcatctc tttgtagctg gcatcggggt
    63661 agcgttgcgt cagggcatcg ccgatagcga caatcacatc attttcgatg gcgatatcaa
    63721 cgccttcctg cactttcgcc gggtgtaact gtactgcggt gacattcttc agaatcaaca
    63781 tgattacacc tccacgcggc ccagcagata atgatgatgc tggtggacat ggctgatgat
    63841 gcggcacata tcgttcagct ccggtggtac gttgtcgaac tggccttcgc tgtcgatgtt
    63901 cagcacccag ctttggttat tcagacgtac gcgtacccga caatcttcca ccaggaagcc
    63961 tgggttgctg ctgttatcaa agtcttgcga caggctgaag acggtgattt tgtctttgta
    64021 cggtttaccg ttccacggac agaactgagc gcagttgccg cattcgttac agtaagcgtc
    64081 gaggtgcagc gtctggaaac ggttctggaa gcctgggacc gcaatggaga cgttggcgcg
    64141 gttcgggcag acatccacac acttgctgca aacgtagtta cattcgaggc agcgagcggc
    64201 ttcctgcgcg acaaacgcat cacgatcgtc actgttcacc agcgtgatag agatatcgcc
    64261 tttacgttga tagatttccg ccggattgac gttgttccag tatttattgt tctggtggga
    64321 acggatattt tcccgactaa ggatggcatc ggtcgcccga cgcgcggttc cgacagcagc
    64381 gacaatggag gatggtccgc gctgtacgtc gccgatcata aagacgtcag tcagacgagt
    64441 ttcgccatta tggtcgacgt ctggccagcc gtttttgtcc agcggtacgc ccatcgcatt
    64501 cagggcttca gtatcctgct gttcaccgat ggcggtgatc aggctgtcta catgcagtgt
    64561 tactgtttcg ttggtttcaa ccggacggcg acgacctttc tcatcgggtt cgccaagcga
    64621 cataacgcgc aaggttaagg tgccatcagc atcgaaacat tccggattat tcaggaaacg
    64681 gaactccacg ccgtcgtgca acgcttcttc atactcttcg cgccatgcgg gcatctcttg
    64741 cagtgaacga cggtaaacga tcgttgcttt ttctacgcct ggaacgcgta acgccgcacg
    64801 agcgcagtcc attgcggtgt tacccgcccc gacaacgacc acatgtttgc ccagcttgag
    64861 cgctgtaccc ttgttgtatt cacgcaggaa ggggagtgat ttccagacat tttggttgtc
    64921 gcccgccagt ttcacaccgc tatttttatc agtgccggtg gcaatcagaa catagtggaa
    64981 gccctgattt tttaactgtt caacggtcaa atcgggtgag cagccatact caaatttcac
    65041 gccgtgagcg gcaacaaaat cgatatcgtg ctgaattaac tctgcaggaa tacggaactg
    65101 aggaatgata tttttcacca cgccgccagc attggcttcg cgttcaaaca gcgtaaccgg
    65161 atggcccgct ctggcaagga agtaacctgc tgccagaccc gccggacctg caccaatcac
    65221 ggcaaccgga tggcgtgaac cagaaccggc gggtttgtgc cagcgttgct tatattcatc
    65281 ccaacctttt tccagcgcga cttttttcag ttcgcggata ttcagcgcac tgtcgtaatc
    65341 caggcgggta cagttgtatt ggcactggtg atcgcaaata tgaccggtaa tggcgggcag
    65401 agcgttgtgt tggtagatga gttccagcgc gtcggcatag cggtgttcgc caagcagacg
    65461 gatgtattcc ggaatatctt gcttgatagc gcaggcagta acacaggggg caacgtagca
    65521 atcggtcagc ggcaggtctt ctgccacttc aatacgctct tctggcttcc agtgtttctg
    65581 ggtgtattcc atggttaacg catctgctgc cagtctgttc agtcgttcga cgtcaacatg
    65641 gtcaagtccc caggcgtcgg agccttccag ctcgcgcatg caggcactta agcgcaaata
    65701 gccgccaggt ttcagcaggt cggttgccat agtaataggg cgaatacctg tatcaaaaat
    65761 atcgcggata gtcagctgac tggcaccacc ggaataagaa atgggcagtt tgccgtcaaa
    65821 ggcgcgagag agaactgctg caacattgat ggagagcggg aacagcgcac ggcctgacat
    65881 atacatctct tcaccaggca gtgcgccttt attgttgatg gtgccgagag tgttagtcag
    65941 ttttacgcca aagccgagtg atttttcttt tgccagtgcc atcaggcgtt ccagcatttc
    66001 cagtgcttgc gtcagcttga ggtcgtgatc aaatgactct tcttttaagc ctatgtaacc
    66061 gaaaccgcag acatcgagga tctcacgaac acgcgcgtat cccagtaagg tcgggttaag
    66121 tttcacaaag gtgttgagcc ctttttcttc cagcatgtag cggcaaatgg cttcgatttc
    66181 atgcggagga cagccgtgca tggtggagag ggtgacgccc tgcaccatac tggtggggat
    66241 gcgagcgggt aaggcttgca agctttcgcg tttttcctgc aatccgtggc gggctaaaaa
    66301 tgcgtcatcc tggagtaatt tattcagcgt atcgcgatat tgcgcgaatt tcggatggtc
    66361 agatgcgtcc atcatattgt cgatgaactg ttgcattgac ggttgcttaa taccttcgag
    66421 gttgtaaccg acgctcatat taaagatgaa cgatttaccg gaatcagaag gctggaacat
    66481 cgcttcgaga aggtgcaggg caaaccaggc tttgaggtat tcatcccagg ctttaagcag
    66541 ggtaaattcg gtagaccatt cggtgttaaa gcactcgtct tcggcatcga tacagggctt
    66601 ttccagctcc aggcggtcaa gaatttggac ggtttttagt tcgatgaagc gtccgccagt
    66661 cagccaggaa gtgacaatat tttgcgcgag ctgcgtgtgc gggccagcgg cagggccgac
    66721 gggagtggca caggtttcac cgaagacgct aacagtttta ccttttacag gtgagtaaaa
    66781 ctgttgctcg ggaataccaa agattgagcg ttgttgttgg tattcatcaa atatgcgcgt
    66841 caaaagttcc tcaaacggaa tgggacgcat aatatccccc ataaccctct ccttagctta
    66901 tacagatatc attgagtgac cggtgttgag aaatccggtg gtttaggggg atagagcaac
    66961 aatcgcacca ctcttgccag gtttggcggg aaatataaaa aaatgtgagg cggctcgaaa
    67021 cttaaaggct ttttgtgaat gaactcacag gtgccaaatg agaattaaaa tcactcctga
    67081 aaattattat tgtcagccca tttatcactt tttctctttt ctcaaaatca gtgattcctt
    67141 atcattatga taaagagtgc tggagagatt aaatatttga acgcaatcgt ttaactacat
    67201 tttctaaatt ttagtatacc ttttttgcgc tgtaataaag tcgtccggag tatcaatatc
    67261 taaaattatt tctgcatttt ctatctcgac ggaataatga gctcccataa ggagtgcctg
    67321 acgcatattg gtgacattgg gtcgttggat tgcctgcatc aagcatggtt ttgacactaa
    67381 aatcggatgg ccggggatgc cattatggag tggcagtatt gcgccatcat ttcgtaacga
    67441 ccagattttt ctaaaaatat cgatggtgag ggttggcatg tcaccgtggg tgagaaaaca
    67501 atgttctgtt tgcactgcgg gtactgcggc ctttactgat gttagtaaac cctgcgcata
    67561 atctgggttg tggataatag tgatattgct ctggttcgca taacgttcgt gcagttcatt
    67621 accacgatag ccggtgacta aaataattcg gctacaaaac tgcaacgcat ttttgatact
    67681 tgtatcaaga attgtcccct gttgccaggg taacatcatt ttccattgcc ccattcttga
    67741 tgataatccg gcagcggtaa ttatacagtc gatggctgac atagtggttc cattatttat
    67801 aggggctaat aacgcctgat aattgcgtta cttcctgatg gattaagttg gggataattt
    67861 atcccagaga ggtcataaag actcgtgaaa agtatagttg acccatcggc attattcatt
    67921 gatttaggtg cgcagaaacg tcccactgtg atttctgttg ttggtgctgg ggggaaaacc
    67981 agcttgcttt tttggctggc agaactgctc caggctagcg gcaggcgtgt gttaatcacg
    68041 acgacaacac atatgtttat gccaacgtct cactggcccg tggttttctg tcgtgatccc
    68101 gccatgcttc ctcatgcgtc tcttacatcc cccatttcat tttgttttca cagctggaaa
    68161 gcgaaccagg gaaaagtgca gggatttacg ccagaagcga ttgatgcact ggtgcaacga
    68221 ccagagtgtg acgtaattct cattgaagca gatggctcgc gtggaatgcc gttaaaagcg
    68281 cctgatgagc acgaaccttg catacccaaa agcagttgct gcgtgattgc tgtgatggga
    68341 ggacatactt tgggcgcgaa agtgagcaca gaaaatgtcc atcgctggtc gcagtttgct
    68401 gatattactg ggttaacacc tgatgcaacc ttgcaactga gcgatctcgt tgcgctggtt
    68461 cgccaccctc agggggcgtt taaaaacgta ccgcaaggtt gtcggcgagt ctggttcatt
    68521 aaccgttttt ctcaatgtga gaatgcgatt gcacaaagcg agctccttca accgctgcaa
    68581 caacacgacg tagaggcaat ctggctgggc gatatacaag aacatcctgc aatcgcgcgc
    68641 agatttgtga attagcggcc cgggtattcc gggttactga aaggatatcc attgaggttg
    68701 gtatgaatat tttcacagag gctgcaaaac tcgaagagca aaattgtccg tttgctatgg
    68761 cgcaaattgt tgatagccga ggctcgactc cccgccattc tgcacaaatg ttagtgcgcg
    68821 ccgatggctc tatcgtcggt acaattggtg gcggaatggt tgagcggaag gtgattgaag
    68881 agtcgcttca ggcattgcag gaacgtaagc cgcgattatt ccatggacgt atggctcgta
    68941 acggtgcgga tgctgtcggg tcagattgtg gaggtgcgat gtcagtgttt atcagcgtcc
    69001 atggtatgcg tccacgtctg gtgttgattg gcgcggggca tgtcaaccgg gcgatagccc
    69061 agagtgcggc gctattagga tttgatattg ccgttgccga tatttatcgc gaaagcctca
    69121 atcctgaact attccctcca tcaaccacgc ttctccatgc tgagtcgttt ggtgcagcag
    69181 tggaagcact ggatattcgc cctgataatt ttgtcctgat tgccacgaat aatcaggatc
    69241 gtgaagccct cgacaaactc attgaacagc ccattgcatg gttggggttg ctggcaagtc
    69301 gccgcaaggt tcagcttttc ctgcgtcaat tgcgtgagaa aggcgtggct gaagaacata
    69361 ttgcccgttt acatgcgccc gttggttaca acataggtgc ggaaacgccg caggagatcg
    69421 ccatcagcgt gctggcagaa atattacagg tgaaaaataa cgcgccgggt gggctgatga
    69481 tgaaaccttc tcatccttcc ggacaccagc tggtggtgat tcgcggtgcg ggtgatatcg
    69541 ccagtggtgt ggcgctacgt ctgtatcatg cgggttttaa agtgatcatg ctggaagtgg
    69601 aaaaaccgac agtgattcgt tgtaccgtgg cgtttgccca ggccgtgttc gatggcgaaa
    69661 tgacggtcga aggcgtcact gctcgcctgg caaccagctc tgcggaagcg atgaaactta
    69721 ccgaacgcgg attcatccct gtgatggtag atcccgcctg ttcattgctt gatgaactga
    69781 aaccgctttg cgtggtggac gctattctgg cgaaacagaa tttgggaacg cgggcagata
    69841 tggcaccagt aacaatcgcg cttgggccgg gctttactgc agggaaggat tgtcatgcgg
    69901 taattgaaac aaatcgcggg cactggctcg gtcaggtgat ttactctggt tgtgcgcagg
    69961 agaataccgg tgttcctggc aatattatgg ggcataccac ccgacgggtg atccgtgctc
    70021 ctgctgcagg cattatgcga tccaacgtga aattaggcga tctggtgaaa gagggcgatg
    70081 tgattgcctg gattggtgag catgaaatta aagcaccgtt gacggggatg gtgcgtggct
    70141 tgttgaacga cggcctggca gtggtcggtg gttttaaaat tggtgatatc gatcctcgtg
    70201 gtgaaacggc tgatttcacc agcgtttctg ataaagcccg ggcgattggc ggcggcgtac
    70261 ttgaggcgtt aatgatgttg atgcatcagg gcgtgaaagc gacaaaagaa gtgctggaag
    70321 tggcttaaat gaaaatggcc ggatggtatt acccacccgg ccttaaaatt actgacaaat
    70381 caccgttccg gttttgcctt caatcccttc tttcgctttg ctcaatacgg taatcagtgc
    70441 ttcacgacct gcgcgagagc gagcaaacga ggcggcagct tccactttag gcagcataga
    70501 acctttcgca aaatgacctt cttcgataaa gcgttcagca tcacttaatg acaggcgatc
    70561 gagccactgt tcattctctt taccgaagtt aatggccact ttttctaccg cagtcagaat
    70621 gatcagcata tcggcatcaa tcatttctgc taaacgggcg ctggcccagt ctttatcgat
    70681 aaccgcgctg gcaccacgca gatggttacc ttcacgaata acagggatac caccaccgcc
    70741 aacggtgatc accacctggc ctgcatctac cagagcttta accgtttctt tttcaatgat
    70801 atcaaccggt tttggcgagg caacaacacg gcgatagccg cgaccagcat cttctttcag
    70861 agtgtaaccc tgttttgtca gttgctctgc ttcttgctcg gtaaagaacg aaccgatcgg
    70921 cttggtcggg ttgaggaatg ccggatcgtt agcgtcgact tcgacctgag taaccagcgt
    70981 tgctacaggt ttattaatgc cccgagaaag cagttcttct cttaaggcgt tttgtagatc
    71041 gtaaccaata taaccctggc ttaaggcaac acagacagac atcggcagca ttggcgagtg
    71101 tgcttcagtt tttgcggcag cttcaaaggc ctggttaatc atgcccacct gtggcccgtt
    71161 accgtgagtg acgatgacct catgtccctg ggcaattaaa tcaacaattg cctgagaagt
    71221 aatttttacc gctttcattt gtccggccag gtcatcgccc agcgcattcc cgcccagggc
    71281 gagaacaatt ttcttactca tttttcctca ctcatcattc ttgattgtgt atagatccct
    71341 gacagtggtt agagcacggg agggacaaac ggtttgcgtc gcaggaaacg acctcgcccg
    71401 gctttgcctg taaaggtgcc gtcacagaaa atcgtttcac cacgggataa ggttctgaca
    71461 atcgcgccct gacaggtaaa accctcccat ggcgagtagt cggcgttgtc gtggagatgg
    71521 cgatgctgaa tttgttggct ctgacgtggg tcgataatca ccacgtcgcc atcggaaccg
    71581 ggcgctaata atcctttttg cggccacagg ccaaacagcc tggcgggcat tgcgctggtt
    71641 aattcaacaa agcgttccgg tgttatacgt cccgtcatca cgccactgga aaacagtaac
    71701 tgcatgcggt tttccacacc gggtaagcca tttgggcagc gactgaaatc gcctttagaa
    71761 atttgcaggc gttgagccat tgagaaggtg cagtgatcgg tcgccaccac gtcaatcgca
    71821 ccatcgctga tgccacacca cagtttgtcc tgctcgcgta cgttacgcag cggtgggcta
    71881 agaatgaact tcatgccgtc ttctgtatcg taactgcgtt cgtccaacag gagatattgt
    71941 gggcaggttt caacccagac tggctggtga ttcgcacggg caagacgcag ataatccaga
    72001 cctaagccgt tagacaggtg cacgatatag agcggggcgt taccggcaat ttgtgccagg
    72061 ttaatcatgc gggcgatggc ttccgcttcg cattccagag ggcgactcaa ggcatgatag
    72121 cgcggcgcgg ttaaccctgc ggcgataaat tccgcccgct tgctggcgat agccgcatca
    72181 ttttccgggt gcacggtggt cagcgcgccg gattcatgca gacggcgtaa tgcctgcaaa
    72241 acctcgtcat cgttgagttt gtattgatag gttaaataga gtttaaaact gctcagtcct
    72301 tcctcgacca tcatcgggat ttcgtcgagg attgcgtgat taatgtgctg gatcacaccg
    72361 tgaaagctgt aatcgatgac cgctttatgg gcggcataac cacgataaac ctccagttga
    72421 tggcgtaacc gacagccgtt tgggccaaat cccatatggt caataatggt tgttgtaccg
    72481 ccacacgcag ctgcgcgggt accggtaaaa aaatcatcac aactgcgcgc gatgccgaca
    72541 tcaatattga aatgcgtatg gacatccacg ccgccaggga aaacgtaaca gccagtggca
    72601 tcaatttctt catacgggag ctgcggcgaa atattgttgc ccaactggcg aacaatcccg
    72661 ctttcaatca gcaaatcctg tttggcttgt ccatctgcgt taacgacagt gccgtttttg
    72721 atcaatacgc gcatagcaaa ctccaaaaac cctccggcga accggagggg aataagtgaa
    72781 gagtaattac tctgttgcca gccagcttaa cgggattgca gcgtacatcg cggcacaggt
    72841 caccaggtga gatttccagg ttttttcgtt aggtgcatgc gcttcaggtt ctttacccgg
    72901 gccaaagccg atcaccggaa tgccgtgacg gcccatgata gatacgccgt tagttgagaa
    72961 ggtccactta tcaacaaccg gcgctttgcc aaacagccct tcgtaggcat tcaccagtgc
    73021 tttaacggtg aagtgatctt cttccacttt ccaggtcggg aagtagcatt cggttgggta
    73081 aaccaggcca gtccaggacg gacggtcgta gttgtacata gaaacaaccg cgttagcttt
    73141 ctgtactgca ggcagggcgc ggatttcgtc cagcgcgcct tcccaggttt cgccccaggt
    73201 cagacggcgg tcaatagaga cggcgcagct atctgctaca gcgcaacggc ttggggatgt
    73261 gaagaagatt tcagaaacgg tgagggtgcc tttgccgagg aattcgtcat aacccagacg
    73321 ttgggagagt tcttgtaatt cgccaagaat cggacccatt ttgaaaatgg cgttgtcacc
    73381 gcgttctggc gcagaaccgt ggcagctaac accctgaaca tcaatacgaa tttccatacg
    73441 accgcgctga ccacggtata tctggcagtc ggttggttcg gtactgacca caaattccgg
    73501 gcgaatgccg gattgttcaa taatgtactg ccagcacaga ccgtcgcagt cttcttcctg
    73561 cacagtaccg gtaaccagca gggtatattc atcttccaga ccgaggtctt taatgatttt
    73621 accggcataa accatagatg ccatgccgcc ttcttggtcg gaagtaccgc gaccaccgat
    73681 tagctcatca gtttccatgc cttcgtacgg atcgaagtcc cagtttttga tgttgccaat
    73741 gccgacggta tcgatatgag cgtccattgc caccagacgc gggccgtggc cgatataacc
    73801 gagaacgttg cccatcgggt cgatttcaac tttatcgaag ccgacttttt ccatctcttc
    73861 tttaatacga tgtactacgc gtttttcgtc gcagctttca ctgggaatag caaccatgtc
    73921 gcgcaggaag cgagtcatgt ccgcctggta atcttttgct ttttcaagaa tcagtttgaa
    73981 tggaatattc ttagccatta tttttctcca gattttttac tccccgtttt gcagggagta
    74041 gttccaatag ggtgattaag gtgctacagc gtgtttgcct tcccagacaa cttcgcggta
    74101 gtgcttcacg tcggtgtcgc cttcagtgct gataaccagc accacggcat ctttgttcag
    74161 cgccagtttt tccatcaggc tttgacgttg cgggtgataa tgaaccgccg cgagaacgcc
    74221 caaaccgaca gcgccggatt caccggagat gatgcgcggg tcgttgccgt acggattacc
    74281 cagcacgcgc atacctaatg cggcaacgct gtcctggcag gagatgaatt gggtggcgca
    74341 gttacgtagg atttcccagc ccagcgggtt aggttcgcca caggccaggc ccgccatgat
    74401 ggtggccata tcaccgccaa cgttgacgat gtcgcctttg acgccggagc gataaataca
    74461 gtcagctttg tcaggttcaa caataatgct gtgcagattt tgcgggctat agacgtcgac
    74521 cagataaccc agcacaccac cggccattgc tccgacaccg gcttgcagca gaacgtgcgt
    74581 cggggttacg cccatttcac gcatttgctc gacggcttca tctgccaggg ttgcgtagcc
    74641 ttgcatgatc caggttggga ttttggtgta accttcccat gccgtgtcct gtaccacttc
    74701 ccagccgtgc tgctgcgcgt gttgcatggt caggcgaacg gtatcgtcat agttcatatc
    74761 cgtgacgatg cactcggcac cgaggttcag aatggcgtca acgcgttcct gagcagaacc
    74821 tttcggcatg taaatcaccg cattctgtcc gagttgctgc gctgcccacg ccacaccgcg
    74881 cccgtggttg ccgtcggtgg tggtcgcgaa agtcattttt tcgccgatgg catttttcag
    74941 gtgctcaaat gacagcgttt cgatatcaag atgatatttt tcacacaata attgagcgat
    75001 ggcgtacgca ccgccgagca ttttgaaggc gttcagaccg aatcgttttg attcgtcttt
    75061 gacaagaatt ttcttcacac caaaaaggtt tgcgagatcg tccagcgcac aaagcggtgt
    75121 tgggcgataa ccagctattt tctggtggaa ctggcgcgcc agtttggcct ggctttgcga
    75181 aaagagcggt gatgtttcgc cgttgaaaaa tttgttatcg gcgatatcaa tcttcaatga
    75241 gaaaacggac atatcctatc cttttggcct ctggaaatag agggccgacc agctgatcgg
    75301 cccgaggggt tatttcacgc gttcttgcgc ttctttcagc agttgctcga gcagtgcacc
    75361 tggtttggcg tatttacggg acaggatcat cgcggcgatg atataaggct tccagctggc
    75421 ttctttgtag gttgcgatac ggtatttttc gaatacgcct tcagtcactt caccttcttt
    75481 acaggatacg ccgctgatat cagctggcag gcagtgcatg tacagggctt cgccatcacg
    75541 ggtcagttcc atcatctctt cagtacaatg ccagtctttg tgttgcgcgt tctgtgccag
    75601 acactgtttt tccagtgctt ttaagccttc gtgatcgtta gcgcgcagca attcggtacg
    75661 ctgttccatc actttgtaag gtgcccatga cttcggataa acgatgtctg catctttgaa
    75721 cgcttcttcc atgctggtga cctgacggaa gctaccgcca gatgctttag cattgttttt
    75781 cgccacttca accacatccg ggatcaggtc gtagccttcc ggatgggcca gggtgacatc
    75841 cataccgaag cgagtcatca gaccgatgat gccttgtggt acagagagcg gtttgccata
    75901 gcttggagag taggcccagg tcatggcgat ttttttacct ttcaggtttt ccagtgaacc
    75961 aaagtgttca cgtaaccacg cgaggtcagc cattgactga gtcgggtggt caatatcgca
    76021 ttgcaggttc actaaagccg gacgctgtgg cagtacaccc tgcttgtaac cgtcatcaag
    76081 tgcagcgcca acttcacgca tataggcgtt gcctgcgccc agatacatat cgtcgcgaat
    76141 accaatagcg tcggcgcaga aggagatcat attggcggtt tcacgcacgg tttcgccgtg
    76201 agcgatttgt gatttgcctt cgtcgagatc ttgttgtgca aggccgagca ggttaagcgc
    76261 ggaagcataa gagaagcggg tacgggtgga gttgtcgcgg aatacggaaa tacctaatcc
    76321 actattaaag actttggttg agatgttttc agcacgcagt gcttttaatg ctgcggcaac
    76381 gtccagtact tgtttcagtt catctggcgt ctgttcccac gttaacaaaa aatctttctc
    76441 gtgaaggtga gaggtcagcg aattgatatc cttaatcagc tcattaacag ttttcatcat
    76501 aaagtcccgg tagtggaatg acaggcaaag tggtttattt cactgtgact tgccaaagtg
    76561 attggtgttt tcacagctat acctgggact aacaataagt gtgccagaat tatccacggg
    76621 gctgcaaaag actaatttga cggataatgt gtggggttga tcacaaattg atgccagctt
    76681 ccggttgttt gtaaaatacg aaaacgtttg gcttttttta tcgcgttatt tatttgctgc
    76741 taagtatcag aaataagata aagggacagg ctatctctct tcagtttgat aaactcaccg
    76801 ccgtaattct catattgata tagaaatgtg atatctcttc cataatttca ttagaaaatg
    76861 ataaaaatct tatgttttta tcaaagccaa tttcgcctga gttaatatca tcatgatctg
    76921 tgaaccatca acgtcttcaa tgatcgactt ttaagtaagt ctggaaggta aagctatgga
    76981 gcttgctact acgcagtcag tattgatgca aattcaaccg acaattcagc gttttgccag
    77041 aatgcttgcc agcgttttgc agcttgaggt tgagatcgtt gatgaaaact tgtgtcgcgt
    77101 cgccggaacg ggcgcgtatg ggaagtttct tggtcgccag ttgagcggca actcacgcct
    77161 gctccgccac gtcctggaaa cgaaaactga aaaagttgtg acacagtctc gcttcgatcc
    77221 cctttgcgaa ggttgcgata gtaaagaaaa ttgccgcgaa aaagcatttc tgggtacgcc
    77281 tgtcatttta caggatcgtt gtgttggggt gataagtttg attgccgtta cccacgagca
    77341 acaagagcat atcagtgata atttacgcga attttctgat tatgttcgcc atatatccac
    77401 catttttgtt tcgaaacttc tggaggatca ggggccagga gataacatca gtaaaatatt
    77461 cgcgaccatg atcgataata tggatcaggg cgtattagtt gttgatgatg aaagtcgggt
    77521 tcagtttgtt aatcagactg ccttaaaaac acttggtgtt gtacaaaata atattattgg
    77581 gaaacctatc cgtttcagac cattaacatt tgagagtaat tttactcatg gacatatgca
    77641 gcatattgtt tcgtgggacg ataaaagtga attaatcatt ggtcaattgc ataacattca
    77701 gggccgacaa ttatttttaa tggcatttca ccaatcgcat accagttttt ctgtagcaaa
    77761 tgcacctgat gaaccacata ttgaacaatt ggttggcgag tgccgtgtta tgcggcaatt
    77821 aaaacgactc attagccgta ttgcacccag cccatccagc gttatggtgg ttggtgaaag
    77881 cggcacgggt aaagaagtcg tcgcccgagc aatccataag ttgagcggaa gacggaataa
    77941 accctttatt gctatcaact gtgccgcgat tccggagcag cttctggaaa gcgaactgtt
    78001 cggttatgtt aaaggcgcat ttactggcgc ttctgccaac ggtaaaacag ggttgattca
    78061 ggcggcgaat acgggcacgc tgtttctcga tgaaataggt gatatgccat taatgttgca
    78121 ggctaaatta ctgcgcgcta ttgaggcgcg tgaaattctg ccgattggtg ccagtagccc
    78181 aatacaagtc gacattcgca tcatttctgc aactaatcag aatttggccc agttcattgc
    78241 cgaaggtaaa ttccgcgaag atctcttcta ccgacttaat gttatcccga taactctgcc
    78301 accgctgcgt gaacgtcagg aagatattga actattggtg cattactttt tacatctgca
    78361 tacccgtcgt ctgggatcgg tttatcctgg cattgctccc gatgtcgtcg aaatattgcg
    78421 taagcatcgt tggcccggaa acctgcgcga gttaagcaat ttgatggaat atctggttaa
    78481 cgtagttcct tcaggtgaag ttatcgacag cacgctattg ccgccaaatc tgctgaataa
    78541 tggcacaacg gagcaaagtg atgtaacaga ggtcagtgag gcgcacctgt cactcgatga
    78601 tgcgggcggc acggcgctgg aggagatgga aaagcaaatg atccgcgagg cgctttcacg
    78661 tcataacagc aagaagcaag ttgctgatga actgggcatc ggcattgcta cgctctatcg
    78721 caagattaag aaatatgagt tgttaaacac ataacctcag tgaatccggc ctgaattcag
    78781 gccggatatc cttttacttc gttttctcgc aatcctgaac tgtatttaca atcatctgat
    78841 accccgtgca gcgacaaaga tttcccgcca gtccgcgacg aatttccgta atggttaatg
    78901 gcttctcgcg tggtttcgcc agcattgccg tggtagccat aatcaggcca ggcgtacaaa
    78961 acccgcactg cactgcgccg gatttcgcat aagcctgctg aacatgagaa agttttccgc
    79021 ctttcgcttc accttccagc gtgcggatct cttttccttc agcccaggcg gcaaggtata
    79081 agcaactgtc tattgctgtg ccgtcgacca acaccgtaca ggcaccacat tcacccacgc
    79141 agcacccttg tttgacactt agcagtcctt gttcgcggag taattccgag agcggcgtgc
    79201 ctggtgcggc gtgaagctga aaaggcatcc cgttaatggt gcattcgatg gtaattgttt
    79261 cgctgtgatt cattgcaatt ttccccccgc cgcggcgacg gcttcgctaa tcactttttt
    79321 ggtcatcgtc tggatgagat gcagacgaaa ctctttactg gcccgccatg aagaacgcgg
    79381 ggcgacatct tgcaggacag attcgctgat agcttccagc gtttgcaggt ttaatggcgc
    79441 attttgtgca gtctgttcgg catgttggca gcgaatcggc gttggcgcgg caacaccaaa
    79501 tgccaggcgt aattcgctga aattgccgtt atccagtcgg caatgtgcgg cgcagccaat
    79561 cgttgaaata tccatcgcgt cgcgcatggc atatttaaaa tgcgcgctgc ccgcgtgttc
    79621 tttcggctgt ggcggaaaat gaaaggcgac gaggatttcg tcatgctcaa gagacacttt
    79681 gcccggcccg gtgtgaaagc cattaatcgg gacgaaacga acaccgcgcg gggagtggat
    79741 ctccagtttc gcgtcataaa ttagcgttgg cgtggcagaa tctgcgctgg tggcaccgtt
    79801 gcaaatattt ccaccgtagg tagcgacgtt acggatctgc ggtccagcaa tggacgtggc
    79861 cgcagcacat aacgccggga gatgacgttg agttatagga tcttctatta gctgggtaaa
    79921 tgtcgttgca gagccgatac gtagcgagcc atcttccgcc agcgtaattc cccgcagctc
    79981 cgccagatta tgaatatcaa caatatggcg ataacggtca ttgtgatggt ggagctgaat
    80041 cagtacgtca gtgccaccgg cgagcagttt ggcctgcggg ttgtcagcca gcaggttgat
    80101 ggcatcggca agggttgctg cgcgatggta agaagcaaaa tcaaacatga tgttatcctc
    80161 aaatcaatcc tgccagatgg aactcttcat ataaccgttt tggcgtcagc ggcagtgtat
    80221 tgattgcaac accggtagcc atcttcaccg cgttacgaat agcagcggca acaggaatta
    80281 ttggtggctc acccagtgac ttatgtccgt atgcggattg cggctcattg atttcgacga
    80341 acgcgctttc cagttgtggc agatccggca tggtcggcat tttgtaatcc agcagattgg
    80401 ggttacggac cacgccgctt ttagcatcga tgatcatctc ttcaaatagc gcccagccaa
    80461 tgcccattcc cattccgccg tgtacctgac cttctgccag cagtggatta agaatatgcc
    80521 ctgaatcatg aacgttgagg atgcggttga tggtgacttt gcacagcgca atatcgaccg
    80581 tcagatcaac aaaggtacag ccaaacgccg gtgggttagt ggtggttttg atggagcttt
    80641 cagcagagag ctgcccgccg cgttcagggt ggtagaaagc gtccatcgcc aaatctttta
    80701 acgacattaa cggctcttcc ggtcgttcaa ccagcacgat atggcctttt atcagggtca
    80761 gattcatcgc tgactgatgt agcatgactg cggcgtgagc gatgattttc tcttttaata
    80821 atagtgccgc actgcgcagc gcaggcgcgg caacatagct ctggcgtgag gcaaatgcgc
    80881 cgggatcgaa cggcgtaacg tcggtatctt gagttgaaat aacgcgaacg tcgctgaccg
    80941 gaacccccac ggtttctgcc accatttgcg agaagacggt gtcggcaccc tgaccgattt
    81001 ccgtcgcgcc gctttgcacg ttgatggttc catcctgatt catcagaagg cgcgcgcctg
    81061 ctatttctac gccgacaggc caggtgttag aggtgtagct aaaacaggcg acgccaacgc
    81121 cgcggcgcaa attgccttgc tggttctggc attctgcacg gcgtttttcc cattcaaaga
    81181 ttttccggcc tttttcaaga cactccggca accctgcgct gtaaatacgt ttgcccgtga
    81241 gcggattagc atctccttcg cgggcggcgt tgcgtaaacg aatttcaaca ggatcaatac
    81301 ctaacgctgt cgcggcgtca tcaagcatag actcaacggc aaatacgact tgtggcgcgc
    81361 cataaccacg catcgcacca gccgagggga ggttggtata gcaggtcttt gaactgtaag
    81421 cgtaggcaca acgaggataa aggtaagcga ctttattccc ccccgcagaa gcgatggagt
    81481 gcccgtgaga tgcataagcg ccggtgttag acagaacatc cagactataa cctttcaatg
    81541 ttccgtcgcg gttcacgccc atttgcccgt caatggtaaa agcgtggcgg gtacgggttg
    81601 cgaggaaaca ctcttcacgg ctaagggaaa ctttcaccgg aatgccgcca agcttgctgg
    81661 tcaggaatgc cgccattggc tcttccagta catcctgttt attaccaaaa ccgccaccga
    81721 caaacggttt gatgactcgt acgcatgacc agggaatatc cagcgcctga ccaaccacgc
    81781 ggcgaacaat gtgcgggatc tgggtgctgg aaacgatggt aattcgcgag tcatcctcca
    81841 tccacgccag cgatgttacg ctttccatgt gacaatgttg aataacgggg gtctgatagt
    81901 gcccctgtac ctggtagtcg gcggcatcga ttgtttgttg gacattaccc gtcgacatcg
    81961 tgctttgttt cagtaaattg ccaccgttat ggattggtgc agcgtcttct gccagcgccg
    82021 cttctggcgt ggtgataacg ggtaattctt gccactcaat gctgaccaat tgcgccgctt
    82081 tttctgccgt gagttcatcg cgggccacga cgatggcaac ggcgtcacca tgatgacgaa
    82141 tatggcgagt tagcagtgcg cgatcggcgg tatcgcgctt gttttcgtca agtgtccagg
    82201 catgcccagc agtagcaaat ggaatatcag gcacatcttc ccaggtaaaa atcgccagta
    82261 cgcccggcaa acctctggct tgttcatcat taatacttac ggcataacca tgtgcgatag
    82321 ggctacgtac atatttcgca taacacatgc ccgccataac ataatcgtca gtatatcgtg
    82381 cccgcccggt gaccttagca atggcatcga cgcgcatgca tgattcaccc gtagcggttg
    82441 cttcccgcgc ttccatagaa atcccctcga tttgaacatt tggttcttat ggcaaagatt
    82501 tagtctaagc aggcaagatt tacgccagaa acgacgataa gcgttagggg aggtaggaag
    82561 tgtgatgacg ttaaaaaaac acagatatga tacgaaacag gactctgaat aggggcagtg
    82621 atacgtatca atatgagtgg cgataaaatc aatgtgataa attgggatta ttacgcatca
    82681 ggatgggaaa tagggtaaaa agtcaggaag ttcgatacct ctacagcgaa tattttgctg
    82741 atgatacttc cctttgccaa atgaaattaa cctctttctc tattaccacg tttttccaga
    82801 agcaagagat tgggtatcaa gaggctggct gctatgataa ggcgtcttgt tttttaagcg
    82861 aggaaagatt ttgagtgcgg gacgcctgaa taaaaaatct ctgggtatcg tgatgttgtt
    82921 atcggttgga ctgcttttgg cgggctgttc gggtagcaaa tcatccgata caggaacgta
    82981 ttccggctcc gtttacaccg tgaaacgggg ggatacgcta tatcgtattt cgcgcaccac
    83041 gggaaccagc gtaaaagaac tggcgcgact gaacggcatt tccccccctt acaccattga
    83101 agttggtcag aaactaaaac tgggtggggc gaaaagtagc agtagtacac gtaaatcaac
    83161 cgccaaatca acgaccaaaa gcgcatcggt tacaccgtca tcagcggtac cgaaatcttc
    83221 ctggccgcca gtagggcaac gttgttggtt atggccaacg acagggaaag ttatcatgcc
    83281 gtattcgaca gcagatggcg gcaataaagg gattgatatc tcagctccac ggggtacacc
    83341 tatttacgcc gcgggtgcag gaaaggtggt gtatgtgggc aaccagctgc gtggctacgg
    83401 taatctcatc atgattaaac acagtgaaga ttacattacg gcttacgccc ataatgacac
    83461 gatgctggta aataatgggc aaagcgtgaa ggctgggcaa aaaatcgcca ctatggggag
    83521 cacggatgcg gcatctgttc gcctgcattt ccagattcgt taccgtgcaa cggcaattga
    83581 tccgctacgt tacttgccgc cgcagggcag caagccaaaa tgctgatggc gaattaatca
    83641 gcagtcagca gcgcggcact tgctaaggag agcgtaaggt ttataatgcc ttacgcatct
    83701 cgaagcgggc gtagttcaat ggtagaacga gagcttccca agctctatac gagggttcga
    83761 ttcccttcgc ccgctccaat ttatcttcac ctgatcaatc tgccattttt gctgtatctg
    83821 attttctata ttatcttaat tcaaccgctt caggcttttc gcaatcgctg taacacttcc
    83881 ccattttttt gtaaataaaa agcgtttacg caatgcaatc cttttgtaac aacccaggta
    83941 aaatacctta ttttcaagtt gttgaataag tggttatcta cgcttttaac aaacgattga
    84001 tggattattt tatgaaaggg aaatctgcat taactcttct gctcgctggt atattttcgt
    84061 gcggcacatg ccaggcgaca ggggcagaag tgacgagtga atctgtattt aacattctta
    84121 attccacggg ggcagcaaca gataaaagtt atttatcgtt aaatccagat aagtatccta
    84181 attatcgtct tttgattcac tcagccaaat tacaaaatga aataaagagc cactatacca
    84241 aagacgaaat tcaaggattg ctaacattaa cagaaaacac acgaaagtta acgttgacgg
    84301 agaaaccctg gggaacgttt attcttgctt ctactttcga agatgacaaa acagcggcag
    84361 aaacccacta tgatgctgtc tggctgaggg atagtttatg gggctatatg gcattagtat
    84421 cagatcaggg aaatagtgta gccgcaaaaa aggttctgct caccctgtgg gattatatgt
    84481 ctacgcccga ccagattaag cggatgcagg acgtcattag caaccccaaa cgactggatg
    84541 gagttcccgg gcaaatgaat gttgtgcata tccgatttga cagcaactcc cccgtgatgg
    84601 cagatgtgca ggaagaaggc aagccgcagc tgtggaacca taaacaaaat gatgcgttag
    84661 gtctttatct tgatctcctt atacaagcaa tcgacactga tacaattaac gctgaagatt
    84721 ggcaaaaagg tgaccgatta aaatcggttg cgctgctgat tgcttatctg gataaagcca
    84781 atttctatgt tatggaagat tccggagcat gggaagaaga tgcccgatta aacacatctt
    84841 ccgttgcact ggtgacctct ggactggaac gtttgtcgaa cttactctcg aagaaagact
    84901 ctgtttttgt ctctgattta ctacgcgaag ctaaagccaa tgaactggat gaacctcttt
    84961 caacaacgag gttgaaccac ctcatagata aaggttatga aagaataacg ttacagcttg
    85021 atttaggggg agaatcccca ggttatctgg aaaaagataa acattacaga gaagccgatg
    85081 cggctttact taatgttatt tatcctgcaa atcttgcaaa gataaacacc agaagaaaag
    85141 agcaggttct aaaaatagtt aaaaaactag caggtccgta tggtataaaa agatacgaga
    85201 aggataatta tcagtcggca aatttttggt tcaatgatat taaaaccgat accgatcaaa
    85261 attcacatgc gaaaagagaa aagagcttca ttccatcaac agaagcagaa tggttttttg
    85321 actcatggta tgcaaaatca gcagcaattg tttataaaga atcaagaaag gaagagtatt
    85381 tgaatgactc agtgcaattt atgaatagat cattggccca aataacaggc gagaatatga
    85441 ttggtgcaaa tggcaggagt gtacctgaaa tggcacttcc cgaaagctat aactatatcc
    85501 acaagtcggg aactttgcat gaagcgccaa gccctatcat tccgctaaat tggtcgaaag
    85561 cttcaatgac tctcatgttg aaagagatgt ccaaccttat caatgatgag ggaattaaat
    85621 agttttcata atgagttaca gcacaacgtt gggtattgac tgagcaagat gaacgacaag
    85681 gacaacgaca tcagccttat gaggagcaag aaaatgaaag caaattcgaa aacgatcaga
    85741 aggatgaaag ttaatgttcg gtctgaggaa agtaaatcga aacactcata cgtttgaaac
    85801 cacttttcaa aattggaaag aaaatggcga agatgttgca ttattaatgc ccgaatttag
    85861 tgctaaatgg ttaccgatag cagaagagag tggcagctgg tctggatggg tattgcttgg
    85921 agaaatattt cccttaattt catctgagct cgctgggatg gctttaatgc cagaaacgga
    85981 aaggttaata ggggaatggc tcagtttatc cagttccccg ttaaatctaa agcatcctga
    86041 actaaaatat aatcgtttgc acgtaggtaa agtatttgat ggagtattga gccctgctca
    86101 accactaata agaatatgaa caggggaatt gaatctttgg ttagataaag tcacagtctg
    86161 ccaatacgga aacgctccag tgttagacaa aaaatcatta tattggtcca ttcattttg
//
LOCUS       DAPGWB010000002        86138 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.002, whole genome shotgun sequence.
ACCESSION   DAPGWB010000002 DAPGWB010000000
VERSION     DAPGWB010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 86138)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 86138)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..86138
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.002"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..145
                     /locus_tag="RHX79_000083"
     CDS             <1..145
                     /locus_tag="RHX79_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YhfL family protein"
                     /protein_id="HDV2195305.1"
                     /translation="LVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGP
                     TAQ"
     gene            389..1777
                     /gene="frlA"
                     /locus_tag="RHX79_000084"
     CDS             389..1777
                     /gene="frlA"
                     /locus_tag="RHX79_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417829.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine/psicoselysine transporter"
                     /protein_id="HDV2195306.1"
                     /translation="MTANSPLQRIGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSG
                     IFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS
                     RPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLLGKFIAAGLIIAFMLLHL
                     RSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGI
                     SATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKL
                     ANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFF
                     KCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWC
                     RKRDDYKPLWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAF
                     WAKRSRQLNALS"
     gene            1798..2820
                     /gene="frlB"
                     /locus_tag="RHX79_000085"
     CDS             1798..2820
                     /gene="frlB"
                     /locus_tag="RHX79_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-phosphate deglycase"
                     /protein_id="HDV2195307.1"
                     /translation="MLDIDKSTVDFLVTENMVQEVEKVLSHDVPLVHAIVEEMVKRDI
                     DRIYFVACGSPLNAAQTAKHLADRFSDLQVYAISGWEFCDNTPYRLDDRCAVIGVSDY
                     GKTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSIDYQADCIWEIHLLLCYSVV
                     LEMITRLAPNAEIGKIKNDLKQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGP
                     LRPLGYKEGIVTLMEFTWTHGCVIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTER
                     AINFVKQRTDNVIVIDYAEISQGLHPWLAPFLMFVPMEWLCYYLSIYKDHNPDERRYY
                     GGLVEY"
     gene            2870..3700
                     /gene="frlC"
                     /locus_tag="RHX79_000086"
     CDS             2870..3700
                     /gene="frlC"
                     /locus_tag="RHX79_000086"
                     /EC_number="5.1.3.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 3-epimerase"
                     /protein_id="HDV2195308.1"
                     /translation="MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDL
                     KAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEM
                     NAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCN
                     ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTH
                     YIPGEGKMPLRELMRDIIDRGYDGYCTVELVTMYMNEPRLYACQALERFRALLPEDER
                     "
     gene            3697..4482
                     /gene="frlD"
                     /locus_tag="RHX79_000087"
     CDS             3697..4482
                     /gene="frlD"
                     /locus_tag="RHX79_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-kinase"
                     /protein_id="HDV2195309.1"
                     /translation="MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCI
                     TWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADF
                     ALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHL
                     DFAFASAPQEDETLRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVID
                     TMGAGDSFIAGFLCGWSAGMTLPQAMAQGTACAAKTIQYHGAW"
     gene            4582..5313
                     /gene="phoB"
                     /locus_tag="RHX79_000088"
     CDS             4582..5313
                     /gene="phoB"
                     /locus_tag="RHX79_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417834.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator PhoB"
                     /protein_id="HDV2195310.1"
                     /translation="MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQ
                     YNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATK
                     EKVIEQERVSAAPFCEKLNIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEI
                     YVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQN
                     DKPVHVSELFCRANRITLTIDNKRH"
     gene            complement(5465..6550)
                     /locus_tag="RHX79_000089"
     CDS             complement(5465..6550)
                     /locus_tag="RHX79_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDV2195311.1"
                     /translation="MKTFPLQSLTIIEAQQKQFALVDSICRHFPGSEFLTGGDLGLTP
                     GLNQPRVTQRVEQVLADAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYP
                     TTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL
                     RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRA
                     TLYSGGSQIQGAQALEVLRGLVFAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANA
                     QSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTFRQANPQSE
                     HCAIRINPNRSGEETVLRILRESIASI"
     gene            complement(6562..7866)
                     /locus_tag="RHX79_000090"
     CDS             complement(6562..7866)
                     /locus_tag="RHX79_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfT family protein"
                     /protein_id="HDV2195312.1"
                     /translation="MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYM
                     NRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGA
                     IWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLV
                     AAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVF
                     EERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLIN
                     QAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISA
                     EVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAV
                     AIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA"
     gene            complement(7878..8231)
                     /locus_tag="RHX79_000091"
     CDS             complement(7878..8231)
                     /locus_tag="RHX79_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417837.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2620 domain-containing protein"
                     /protein_id="HDV2195313.1"
                     /translation="MKKIGVAGLQREQIKKTIEATAPGSFEVFIHNDMEAAMKVKSGQ
                     LDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSV
                     EHVEHAIPMLINHLK"
     gene            complement(8242..9120)
                     /locus_tag="RHX79_000092"
     CDS             complement(8242..9120)
                     /locus_tag="RHX79_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotriesterase-related protein"
                     /protein_id="HDV2195314.1"
                     /translation="MSIDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLM
                     TRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELA
                     QEMVDEIEQGIDGTDLKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTS
                     FSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYP
                     DEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQ
                     ADVDVMLRENPSQFFQ"
     gene            complement(9117..10343)
                     /locus_tag="RHX79_000093"
     CDS             complement(9117..10343)
                     /locus_tag="RHX79_000093"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HDV2195315.1"
                     /translation="MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQ
                     LPTLEKLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRM
                     PFCDVIDRVEQALVSAGWQVERRGDELQFLWVNQAVAIGDNLEADLGQVYNITANLSV
                     ISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYD
                     NGFQVVHMGYGVDEKVQVPQKLYEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMD
                     ITLDEFNTHPTAFICINIQETDLAGHAEDVARYAERLQVVDRNLARLVEAMQPDDCLV
                     VMADHGNDPTIGHSHHTREVVPVLVYQQGLVHTQLGVRTTLSDVGATVCEFFRAPPPQ
                     NGRSFLSSLRFAGDTL"
     gene            complement(10343..11506)
                     /locus_tag="RHX79_000094"
     CDS             complement(10343..11506)
                     /locus_tag="RHX79_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfX family PLP-dependent enzyme"
                     /protein_id="HDV2195316.1"
                     /translation="MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQVLENGKR
                     LIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLSVAHQ
                     GHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRVQFVLLKVYSDDDFLY
                     PGQESGFVQHSLHEVVAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLIQAR
                     DQLAKSGIALEQLNAPSATSCTSLPLLAEYGVTHAEPGHALTGTIPANQQGDQPERIA
                     MLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTL
                     PLAGEYPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPKIVGRYDSLGNSLGA"
     gene            complement(11590..11952)
                     /locus_tag="RHX79_000095"
     CDS             complement(11590..11952)
                     /locus_tag="RHX79_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417841.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HDV2195317.1"
                     /translation="METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTM
                     AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEE
                     GYLLANLYGLWMAANEEV"
     gene            complement(11969..12874)
                     /locus_tag="RHX79_000096"
     CDS             complement(11969..12874)
                     /locus_tag="RHX79_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195318.1"
                     /translation="MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVG
                     LTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEG
                     LASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLTQKGFCLALE
                     LGPHTYVGEHQLICRKGESANVKRVGLDNRSADQKIMTDVFFGGSDVERVDLSYHESL
                     QRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLL
                     RAVVDKHALLAHQQRVVSGEQEPSY"
     gene            complement(13143..14147)
                     /gene="trpS"
                     /locus_tag="RHX79_000097"
     CDS             complement(13143..14147)
                     /gene="trpS"
                     /locus_tag="RHX79_000097"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDV2195319.1"
                     /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
                     HAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
                     ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
                     AQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
                     KIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE
                     VADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASVHASRTLKAVYEAIGFVAKP
                     "
     gene            complement(14140..14898)
                     /gene="gph"
                     /locus_tag="RHX79_000098"
     CDS             complement(14140..14898)
                     /gene="gph"
                     /locus_tag="RHX79_000098"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HDV2195320.1"
                     /translation="MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPIAGEE
                     RVITWIGNGADVLMERALTWARQERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYY
                     SEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGG
                     DDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
                     AIDLSQPDVIYQSINDLLPALGLPHSENQESKND"
     gene            complement(14891..15568)
                     /gene="rpe"
                     /locus_tag="RHX79_000099"
     CDS             complement(14891..15568)
                     /gene="rpe"
                     /locus_tag="RHX79_000099"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDV2195321.1"
                     /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
                     NLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT
                     LQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
                     VRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSE
                     LAKVSHE"
     gene            complement(15586..16422)
                     /gene="dam"
                     /locus_tag="RHX79_000100"
     CDS             complement(15586..16422)
                     /gene="dam"
                     /locus_tag="RHX79_000100"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HDV2195322.1"
                     /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN
                     TDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQ
                     DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF
                     YCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE
                     RHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPA
                     KK"
     gene            complement(16529..17815)
                     /gene="damX"
                     /locus_tag="RHX79_000101"
     CDS             complement(16529..17815)
                     /gene="damX"
                     /locus_tag="RHX79_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DamX"
                     /protein_id="HDV2195323.1"
                     /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDI
                     ELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQ
                     YMMMGVGILVLLLLIIGIGSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPG
                     TTSAENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVQGDLNNALTQPQNQQPLNNVA
                     VNSTLPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEP
                     KPVAQTPKRTEPVAPVASTKAPAATSAPAPKETATTAPVQTASPAQTTATPAAGGKTA
                     GNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGV
                     YASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK"
     gene            complement(17907..18995)
                     /gene="aroB"
                     /locus_tag="RHX79_000102"
     CDS             complement(17907..18995)
                     /gene="aroB"
                     /locus_tag="RHX79_000102"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDV2195324.1"
                     /translation="MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNET
                     LAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVAL
                     GGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     ASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYC
                     IRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA
                     RTSERLGQFSSAETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEIRLIL
                     PLAIGKSEVRSGVSHELVLNAIADCQSA"
     gene            complement(19052..19573)
                     /gene="aroK"
                     /locus_tag="RHX79_000103"
     CDS             complement(19052..19573)
                     /gene="aroK"
                     /locus_tag="RHX79_000103"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004709337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HDV2195325.1"
                     /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTG
                     ADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVY
                     LETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAK
                     VVANQIIHMLESN"
     gene            complement(19974..21212)
                     /gene="hofQ"
                     /locus_tag="RHX79_000104"
     CDS             complement(19974..21212)
                     /gene="hofQ"
                     /locus_tag="RHX79_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA uptake porin HofQ"
                     /protein_id="HDV2195326.1"
                     /translation="MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQE
                     KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIA
                     RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN
                     KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT
                     LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK
                     QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA
                     DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG
                     KEDERRELVVFITPRLVSSE"
     gene            complement(21124..21528)
                     /gene="hofP"
                     /locus_tag="RHX79_000105"
     CDS             complement(21124..21528)
                     /gene="hofP"
                     /locus_tag="RHX79_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofP"
                     /protein_id="HDV2195327.1"
                     /translation="MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMV
                     GRGEHIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDALTLGTGTNCEPPQWLWQRQ
                     GDTNEAMDSRTTVDADTRRTGGKAAKSDADGG"
     gene            complement(21518..21958)
                     /gene="hofO"
                     /locus_tag="RHX79_000106"
     CDS             complement(21518..21958)
                     /gene="hofO"
                     /locus_tag="RHX79_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofO"
                     /protein_id="HDV2195328.1"
                     /translation="MNMFFDWWFATSPRLRQLCWAFWLLMLVTLIFLSSTHHEERDAL
                     IRLRASHHQQWAALYRLVDTTPFSEEKTLPFSPLDFQLSGAQLVSWHPSAQGGELALK
                     TLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG"
     gene            complement(21942..22481)
                     /gene="hofN"
                     /locus_tag="RHX79_000107"
     CDS             complement(21942..22481)
                     /gene="hofN"
                     /locus_tag="RHX79_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofN"
                     /protein_id="HDV2195329.1"
                     /translation="MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTG
                     SAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEAL
                     AALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQ
                     GRWQFEYQLTRKVSDEHVL"
     gene            complement(22481..23260)
                     /gene="hofM"
                     /locus_tag="RHX79_000108"
     CDS             complement(22481..23260)
                     /gene="hofM"
                     /locus_tag="RHX79_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofM"
                     /protein_id="HDV2195330.1"
                     /translation="MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDII
                     KDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWL
                     SGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD
                     ASALQRFLPFLPSHQQCLAWRDNEQWLWATRYRWGRKLAVGMTSAKELAAALSVDPES
                     VAICGEGGFDPWEAVSVRQPPLPPSGGDFAIALGLALGKAY"
     gene            23380..25932
                     /gene="mrcA"
                     /locus_tag="RHX79_000109"
     CDS             23380..25932
                     /gene="mrcA"
                     /locus_tag="RHX79_000109"
                     /EC_number="2.4.1.129"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417855.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase/peptidoglycan
                     DD-transpeptidase MrcA"
                     /protein_id="HDV2195331.1"
                     /translation="MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL
                     QIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIF
                     RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEIL
                     ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRA
                     VARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRY
                     GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNN
                     KITDTLKALPTYGPLLPAAVTSANPQQATAMLADGSTVALSMEGVRWARPYRSDTQQG
                     PTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQ
                     SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWQPKNSP
                     PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
                     SFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDT
                     QKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFL
                     IKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW
                     IGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
                     IVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF"
     gene            complement(26097..26657)
                     /gene="nudE"
                     /locus_tag="RHX79_000110"
     CDS             complement(26097..26657)
                     /gene="nudE"
                     /locus_tag="RHX79_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HDV2195332.1"
                     /translation="MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRP
                     TNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF
                     GANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLE
                     DPDFNEARNVSALFLVREWLKGQGRV"
     gene            26977..29112
                     /gene="igaA"
                     /locus_tag="RHX79_000111"
     CDS             26977..29112
                     /gene="igaA"
                     /locus_tag="RHX79_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular growth attenuator protein IgaA"
                     /protein_id="HDV2195333.1"
                     /translation="MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRK
                     LTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIST
                     DDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIYTDSLPLVISLNGHTLQEYMQETR
                     GYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFF
                     CLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQE
                     QINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPL
                     QHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRV
                     GDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATAL
                     TEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK
                     NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARA
                     AQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNA
                     EGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQR
                     HRTRMMEIQAYYESCLNPQLITPSESLIE"
     gene            29177..29845
                     /gene="yrfG"
                     /locus_tag="RHX79_000112"
     CDS             29177..29845
                     /gene="yrfG"
                     /locus_tag="RHX79_000112"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP/IMP nucleotidase"
                     /protein_id="HDV2195334.1"
                     /translation="MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNG
                     VTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFL
                     EALKASGKQRILLTNAHPHNLAVKLKHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
                     ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLI
                     PSLM"
     gene            29856..30257
                     /gene="hslR"
                     /locus_tag="RHX79_000113"
     CDS             29856..30257
                     /gene="hslR"
                     /locus_tag="RHX79_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HDV2195335.1"
                     /translation="MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
                     PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMAMAR
                     KLNALTMPHPDRRPDKKERRDLLRFKHGDSE"
     gene            30282..31160
                     /gene="hslO"
                     /locus_tag="RHX79_000114"
     CDS             30282..31160
                     /gene="hslO"
                     /locus_tag="RHX79_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417860.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HDV2195336.1"
                     /translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNV
                     LAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENA
                     DLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGD
                     VDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEV
                     TVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMD
                     IAEIRNNASPADPQVH"
     gene            complement(31295..33019)
                     /locus_tag="RHX79_000115"
     CDS             complement(31295..33019)
                     /locus_tag="RHX79_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HDV2195337.1"
                     /translation="MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGV
                     PATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWD
                     FGCYLLLMAMLLLPWIQQSLRIRNDSSRYSYFYKSVWHNVLILLVIFLANGLTWLVLL
                     LWGELFKLVGIKFFNTLFFATDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIA
                     TGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASL
                     PWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGY
                     FVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKN
                     TPDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQEQVSEKV
                     LAENVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAF
                     NDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTRPKAWRDLTVDGE
                     TLEINLSK"
     gene            33398..35020
                     /gene="pckA"
                     /locus_tag="RHX79_000116"
     CDS             33398..35020
                     /gene="pckA"
                     /locus_tag="RHX79_000116"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDV2195338.1"
                     /translation="MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGY
                     ERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETW
                     QHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEEL
                     AGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSM
                     MNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDD
                     GVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRV
                     SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLA
                     GTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRI
                     SIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQE
                     KAETLAKLFIDNFDKYTDTPAGAALVAAGPKL"
     gene            35137..35454
                     /locus_tag="RHX79_000117"
     CDS             35137..35454
                     /locus_tag="RHX79_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000493756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDV2195339.1"
                     /translation="MFTFIELQGFSKRRQLLLPDDEFRAFQELLIQDPTAGDIIAGTG
                     SFRKIRWNRSGMGKRGGIRIIYYNVTRNGRIYLALIYPKNEQDDLTEEQRKALKLLSE
                     KLL"
     gene            35513..35809
                     /locus_tag="RHX79_000118"
     CDS             35513..35809
                     /locus_tag="RHX79_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005227164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2195340.1"
                     /translation="MKDELFADLLASAEEMVRIEKGEETPEPEHVHTFSEIDVKAIRE
                     ATGLRQQDFAVAVGVSYDLVKSWETKRRQPTGAPRKLLLLLQANPFIINQLKTI"
     gene            complement(35841..37193)
                     /gene="envZ"
                     /locus_tag="RHX79_000119"
     CDS             complement(35841..37193)
                     /gene="envZ"
                     /locus_tag="RHX79_000119"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     EnvZ"
                     /protein_id="HDV2195341.1"
                     /translation="MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQ
                     QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA
                     QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
                     FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
                     AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEE
                     CNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP
                     LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQCKHLFQPFVR
                     GDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
                     "
     gene            complement(37190..37909)
                     /gene="ompR"
                     /locus_tag="RHX79_000120"
     CDS             complement(37190..37909)
                     /gene="ompR"
                     /locus_tag="RHX79_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator OmpR"
                     /protein_id="HDV2195342.1"
                     /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
                     TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
                     IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
                     LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
                     PRYIQTVWGLGYVFVPDGSKA"
     gene            38137..38613
                     /gene="greB"
                     /locus_tag="RHX79_000121"
     CDS             38137..38613
                     /gene="greB"
                     /locus_tag="RHX79_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026216.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HDV2195343.1"
                     /translation="MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSE
                     NADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR
                     FRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP"
     gene            38710..41031
                     /locus_tag="RHX79_000122"
     CDS             38710..41031
                     /locus_tag="RHX79_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HDV2195344.1"
                     /translation="MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEI
                     TGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELED
                     LYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALD
                     GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTV
                     PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK
                     GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP
                     GLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASR
                     ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
                     QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR
                     VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS
                     TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK
                     PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS
                     LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ
                     NNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR"
     gene            41488..41715
                     /gene="feoA"
                     /locus_tag="RHX79_000123"
     CDS             41488..41715
                     /gene="feoA"
                     /locus_tag="RHX79_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter A"
                     /protein_id="HDV2195345.1"
                     /translation="MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAP
                     LGDPIHIETRRVSLVLRKKDLALLEVEAVSC"
     gene            41732..44053
                     /gene="feoB"
                     /locus_tag="RHX79_000124"
     CDS             41732..44053
                     /gene="feoB"
                     /locus_tag="RHX79_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+) transporter permease subunit FeoB"
                     /protein_id="HDV2195346.1"
                     /translation="MKKLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQ
                     FSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNL
                     YLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK
                     LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAY
                     AGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDK
                     IVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDW
                     LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
                     SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQN
                     GALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRL
                     KGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHED
                     NWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAIDETWQSL
                     KDTFSLSVLMNPIEASKGDGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMG
                     AIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVVIG
                     LLRRARSRVDIELLATRKSVSSCCAASTTGDCH"
     gene            44053..44289
                     /gene="feoC"
                     /locus_tag="RHX79_000125"
     CDS             44053..44289
                     /gene="feoC"
                     /locus_tag="RHX79_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[Fe-S]-dependent transcriptional repressor FeoC"
                     /protein_id="HDV2195347.1"
                     /translation="MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMG
                     KAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR"
     gene            44492..45370
                     /gene="rpnA"
                     /locus_tag="RHX79_000126"
     CDS             44492..45370
                     /gene="rpnA"
                     /locus_tag="RHX79_000126"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnA"
                     /protein_id="HDV2195348.1"
                     /translation="MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKT
                     LKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAA
                     MQNHLDAGYKTLPMVVLLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVT
                     VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQ
                     TGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDI
                     MRFTGVSEEELAAASQ"
     gene            complement(45399..46169)
                     /gene="bioH"
                     /locus_tag="RHX79_000127"
     CDS             complement(45399..46169)
                     /gene="bioH"
                     /locus_tag="RHX79_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709189.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HDV2195349.1"
                     /translation="MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHL
                     VDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQAL
                     VTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA
                     LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML
                     DKLWPHSESYIFAKAAHAPFISHPVEFCHLLVALKQRV"
     gene            46207..46890
                     /gene="gntX"
                     /locus_tag="RHX79_000128"
     CDS             46207..46890
                     /gene="gntX"
                     /locus_tag="RHX79_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417872.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein GntX"
                     /protein_id="HDV2195350.1"
                     /translation="MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPA
                     THSHLPCGRCLQKPPPWQRLVTVADYAPPLSLLIHQLKFSRRSEIASALSRLLLLEVL
                     HARRTTGLQLPDRIISVPLWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRAT
                     ATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAATV
                     QVWCLCRTL"
     gene            46949..47524
                     /gene="nfuA"
                     /locus_tag="RHX79_000129"
     CDS             46949..47524
                     /gene="nfuA"
                     /locus_tag="RHX79_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016942932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HDV2195351.1"
                     /translation="MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYC
                     PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
                     DDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK
                     EGIEKQLLNEFPELKGVRDLTEHQRGEHSYY"
     gene            47885..49201
                     /gene="gntT"
                     /locus_tag="RHX79_000130"
     CDS             47885..49201
                     /gene="gntT"
                     /locus_tag="RHX79_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HDV2195352.1"
                     /translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
                     KVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
                     LTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGP
                     TAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEE
                     MPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
                     FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNI
                     SPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSH
                     VNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLNMVI"
     gene            complement(49246..51330)
                     /gene="malQ"
                     /locus_tag="RHX79_000131"
     CDS             complement(49246..51330)
                     /gene="malQ"
                     /locus_tag="RHX79_000131"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDV2195353.1"
                     /translation="MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQR
                     TATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPT
                     KLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG
                     IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA
                     VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDE
                     QMTAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFC
                     EEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDREL
                     YCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHV
                     MSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGK
                     LRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGDLTLGKT
                     LGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRY
                     IADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLESMFADDGVNKLLKD
                     LDRRRRAAAKKK"
     gene            complement(51340..53733)
                     /gene="malP"
                     /locus_tag="RHX79_000132"
     CDS             complement(51340..53733)
                     /gene="malP"
                     /locus_tag="RHX79_000132"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HDV2195354.1"
                     /translation="MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALA
                     EMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDL
                     LEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPD
                     DWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPL
                     RLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
                     CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAW
                     AITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK
                     VWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
                     GITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANK
                     VRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP
                     RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIP
                     AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVE
                     QVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYL
                     VMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR"
     gene            54345..57050
                     /gene="malT"
                     /locus_tag="RHX79_000133"
     CDS             54345..57050
                     /gene="malT"
                     /locus_tag="RHX79_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HDV2195355.1"
                     /translation="MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYG
                     KTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKRQY
                     ASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSR
                     NLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGW
                     ATALQLIALSARQNTHSAHKSARRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAI
                     LRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQW
                     ELAAELPEIHRAAAESWMAQGFPSEAIHHALAAGDALMLRDILLNHAWSLFNHSELSL
                     LEESLKALPWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEIKDIREGTMHAE
                     FNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSL
                     ALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL
                     PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGD
                     LDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFA
                     NNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQ
                     AGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRI
                     LREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQI
                     AGELEVAATTIKTHIRNLYQKLGVAHRQAAVQHAQKLLKMMGYGV"
     gene            complement(57093..58109)
                     /gene="rtcA"
                     /locus_tag="RHX79_000134"
     CDS             complement(57093..58109)
                     /gene="rtcA"
                     /locus_tag="RHX79_000134"
                     /EC_number="6.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 3'-terminal phosphate cyclase"
                     /protein_id="HDV2195356.1"
                     /translation="MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAK
                     PGLLRQHLTAVKAAAEICRATVEGAELGSQRLVFRPGTVRGGEYRFAIGSAGSCTLVL
                     QTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFY
                     PAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVSRHVAEREIATLAGSFSL
                     HEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLAS
                     PAAVGEYLADQLVLPMALAGAGEFKVAHPSCHLLTNIAVVERFLPVRFGLIETDGVTR
                     VSIE"
     gene            complement(58113..59339)
                     /gene="rtcB"
                     /locus_tag="RHX79_000135"
     CDS             complement(58113..59339)
                     /gene="rtcB"
                     /locus_tag="RHX79_000135"
                     /EC_number="6.5.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-splicing ligase RtcB"
                     /protein_id="HDV2195357.1"
                     /translation="MNYELLTTENAPVKMWTKGVPVEVDARQQLINTAKMPFIFKHIA
                     VMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQA
                     IETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHL
                     GTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRD
                     LAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEE
                     INCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCS
                     CSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSD
                     LVEVIYTLRQVVCVKG"
     gene            59528..61126
                     /gene="rtcR"
                     /locus_tag="RHX79_000136"
     CDS             59528..61126
                     /gene="rtcR"
                     /locus_tag="RHX79_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator RtcR"
                     /protein_id="HDV2195358.1"
                     /translation="MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRL
                     ELLHDTRSRSLFETLKRDIASVSPETEVVSVEIELHNPWDFEEVYACLHDFARGYEFQ
                     PEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQSSPPRKKEQPRGPGEVTIIDLD
                     LSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTG
                     AGKSFLARRIFELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREG
                     LLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDL
                     RQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHATLTGDSVRFNTE
                     ARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQES
                     RPSALTALLGAEAENIDLFDRLQLEHVIALCRQAKSLSAAGRLLFDVSRQGKASVNDA
                     DRLRKYLARFGLTWEAVQDQHSSS"
     gene            complement(61108..61866)
                     /locus_tag="RHX79_000137"
     CDS             complement(61108..61866)
                     /locus_tag="RHX79_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HDV2195359.1"
                     /translation="MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELA
                     EQNLILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTT
                     PEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFI
                     SQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVN
                     MGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC"
     gene            complement(61883..62713)
                     /gene="glpG"
                     /locus_tag="RHX79_000138"
     CDS             complement(61883..62713)
                     /gene="glpG"
                     /locus_tag="RHX79_000138"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease
                     GlpG"
                     /protein_id="HDV2195360.1"
                     /translation="MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQ
                     AERVRAELARFLENPADPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVVMI
                     ACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWY
                     LGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERD
                     PQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK
                     "
     gene            complement(62758..63084)
                     /gene="glpE"
                     /locus_tag="RHX79_000139"
     CDS             complement(62758..63084)
                     /gene="glpE"
                     /locus_tag="RHX79_000139"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HDV2195361.1"
                     /translation="MDLFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLT
                     NDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPA
                     EVAYGA"
     gene            63274..64779
                     /gene="glpD"
                     /locus_tag="RHX79_000140"
     CDS             63274..64779
                     /gene="glpD"
                     /locus_tag="RHX79_000140"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HDV2195362.1"
                     /translation="METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSA
                     SSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
                     IGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
                     RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGM
                     HLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYK
                     GDPKAVKIEESEINYLLKVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDY
                     TLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIE
                     GDCDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEDFGHEFYEAE
                     LKYLVDHEWVRRADDALWRRTKQGMWLNADQQSRVSQWLVEYTQQKLSLAS"
     gene            complement(64833..65438)
                     /locus_tag="RHX79_000141"
     CDS             complement(64833..65438)
                     /locus_tag="RHX79_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195363.1"
                     /translation="MIKFRLYIPPVILGFVIVPLLVWPTVIVLAVLIFTLTFLAEIIF
                     SFPLLVVRISLQELQLELMVEYALFFSVMAGIGWQFSRRTPPELKNRLHCWLVFSPVY
                     FWLILSNFILYISPEKSALLENIRNFFLTFVWLPLNFSPFWPQPWTDFVGPISAQLGF
                     ALGYYCHWCRKNRNQRKKWGDWVTCLSLAILAQGPLFNYLQ"
     gene            complement(65441..66208)
                     /locus_tag="RHX79_000142"
     CDS             complement(65441..66208)
                     /locus_tag="RHX79_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001182130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195364.1"
                     /translation="MQPSPAMQALIEQIYHIFRRYPVPQKFVVCCEYCLSQQEQKVLR
                     STSLRAISYSLINAWNSSPGPDPQNSDEVRYFLPRLLEFVAQGQFDNIHEVFSLRRIN
                     LASKENWREDEWKILQRFACQYMTDWVSGDEAVELQYMLEMFFRADIALAPLLDAINS
                     VPGFWSTVSLACLLNRYCEDYIRDNQDDIDNVITTQINAWARNNHPLLKERARQAIEN
                     PLKQPEPMTEYQVWEDDWIIDECLCAMYDASSESPGK"
     gene            complement(66211..66921)
                     /locus_tag="RHX79_000143"
     CDS             complement(66211..66921)
                     /locus_tag="RHX79_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000424214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195365.1"
                     /translation="MELVNTLFASLVGTDPFTGVDITIANCKSAYWDEGIVQQLINQA
                     LDEGEKFVGADGLEGLLRYNVTLNIGLTSSNVWPGFSLDTATISRLCACGADFGFDPY
                     ISDVPDVQCDLNTTNDLTVQFTAMLNPDERVIIAKRPLKKCESWIEDIYIFQVFKDAW
                     KFHNDNSLRGFRDKQAELKLYARYYTVENCAEESCRDCNSCIRPSFSLSRSAIIRLNV
                     ANARFVYQPFTRDQRARG"
     gene            complement(66936..68444)
                     /locus_tag="RHX79_000144"
     CDS             complement(66936..68444)
                     /locus_tag="RHX79_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312299.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV2195366.1"
                     /translation="MMQNRKWILTSLVMTFFGIPILAQFLAAVIAMLGVGLAGIIEVC
                     NIFITPTIYLLLNIFMLALGALMLFFSGRVWADDSAPEKREIAVWRQCLFLVPALLTL
                     GVWIIALHLADYQFRQMGAGWLADLMLPWLGVLLASLVGGEYWWLVIIPVGAHISFSL
                     GYGWPTRYPLTGTSGLRCRNSLLFILLMLGFVAGYQAYLYKQLNPGVGVRENIDTWAW
                     RPDKLNNQLTPLRGKPQIQFTQNWPRLDGATAAYPIYASAFYALSVLPEDFHEWEYLA
                     NSRTPEAYNKIVKGNADIIFVAQPSGGQKKRAEESGVTLIYTPFAREAFVFIVNVDNP
                     VNSLTEQQVRDIFSGAITNWRTVGGNDQEIQTWQRPEDSGSQTVMQSQVMKNVRMISP
                     QETEVASMMEGMIKVVAEYRNTNNAIGYTFRYYATQMNADKNIKLLAINGIAPTAENI
                     RNGKYPYIVDAFMVTRENMTSETQKLVEWFLTPQGQSLVEDVGYVPMYKTLH"
     gene            complement(68569..71016)
                     /gene="glgP"
                     /locus_tag="RHX79_000145"
     CDS             complement(68569..71016)
                     /gene="glgP"
                     /locus_tag="RHX79_000145"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen phosphorylase"
                     /protein_id="HDV2195367.1"
                     /translation="MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNA
                     TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGAL
                     EAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
                     VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQ
                     IIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
                     SGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRL
                     LIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
                     LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
                     ADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLGRNWRTDLSLLNELQQHCD
                     FPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
                     TRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
                     VFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML
                     DHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRY
                     RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDR
                     TIKEYADHIWHIDPVRL"
     gene            complement(71035..72468)
                     /gene="glgA"
                     /locus_tag="RHX79_000146"
     CDS             complement(71035..72468)
                     /gene="glgA"
                     /locus_tag="RHX79_000146"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HDV2195368.1"
                     /translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF
                     PDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFA
                     YTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV
                     HNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE
                     ITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAEN
                     KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVL
                     QEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL
                     PLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRF
                     VQRQAMAMDFSWQVAAKSYRELYYRLK"
     gene            complement(72468..73763)
                     /gene="glgC"
                     /locus_tag="RHX79_000147"
     CDS             complement(72468..73763)
                     /gene="glgC"
                     /locus_tag="RHX79_000147"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HDV2195369.1"
                     /translation="MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
                     VHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLL
                     PAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
                     ARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVF
                     DADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRD
                     VGTLEAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLV
                     SGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPE
                     GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER"
     gene            complement(73781..75754)
                     /gene="glgX"
                     /locus_tag="RHX79_000148"
     CDS             complement(73781..75754)
                     /gene="glgX"
                     /locus_tag="RHX79_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HDV2195370.1"
                     /translation="MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQE
                     HRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDG
                     EFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKG
                     LTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNY
                     WGYNPVAMFALHPAYACSPETALHEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPL
                     FSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFR
                     FDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEW
                     NDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDC
                     VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQG
                     TPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVE
                     NRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPA
                     GEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR"
     gene            complement(75751..77937)
                     /gene="glgB"
                     /locus_tag="RHX79_000149"
     CDS             complement(75751..77937)
                     /gene="glgB"
                     /locus_tag="RHX79_000149"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HDV2195371.1"
                     /translation="MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDAT
                     DVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFG
                     PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
                     GRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETAS
                     LICGLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
                     KWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVIL
                     DWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALY
                     WIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQV
                     SGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLT
                     FGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
                     FMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPY
                     GFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD
                     SMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE"
     gene            complement(78210..79313)
                     /gene="asd"
                     /locus_tag="RHX79_000150"
     CDS             complement(78210..79313)
                     /gene="asd"
                     /locus_tag="RHX79_000150"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDV2195372.1"
                     /translation="MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA
                     PSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLR
                     MKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVAT
                     YQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNF
                     GVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQ
                     AFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRK
                     LNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
     gene            79505..80098
                     /gene="yhgN"
                     /locus_tag="RHX79_000151"
     CDS             79505..80098
                     /gene="yhgN"
                     /locus_tag="RHX79_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YhgN"
                     /protein_id="HDV2195373.1"
                     /translation="MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVREL
                     LIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAG
                     EEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFL
                     RLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG"
     gene            complement(80155..81495)
                     /gene="gntU"
                     /locus_tag="RHX79_000152"
     CDS             complement(80155..81495)
                     /gene="gntU"
                     /locus_tag="RHX79_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HDV2195374.1"
                     /translation="MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSG
                     MPLDKIAATMEKGMGGTLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAH
                     YAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVP
                     GPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHL
                     GEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLV
                     AIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALT
                     GMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAG
                     GSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIAFQLLS"
     gene            complement(81499..82026)
                     /gene="gntK"
                     /locus_tag="RHX79_000153"
     CDS             complement(81499..82026)
                     /gene="gntK"
                     /locus_tag="RHX79_000153"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417894.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HDV2195375.1"
                     /translation="MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHP
                     RRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGN
                     PNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
                     EGVVASTIEVIKKGK"
     gene            complement(82165..83160)
                     /gene="gntR"
                     /locus_tag="RHX79_000154"
     CDS             complement(82165..83160)
                     /gene="gntR"
                     /locus_tag="RHX79_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001693277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
                     /protein_id="HDV2195376.1"
                     /translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAAL
                     DELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYG
                     YKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAV
                     GFDNFEAARQMTTAIIARGHCHIAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVE
                     QSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHG
                     HDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGESVTPKMLDLGFTLSPGGSI"
     gene            complement(83384..84079)
                     /gene="yhhW"
                     /locus_tag="RHX79_000155"
     CDS             complement(83384..84079)
                     /gene="yhhW"
                     /locus_tag="RHX79_000155"
                     /EC_number="1.13.11.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004213399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quercetin 2,3-dioxygenase"
                     /protein_id="HDV2195377.1"
                     /translation="MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVIN
                     DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHS
                     EYNPNSTERLHLYQIWIMPEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDM
                     ELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHAD
                     SDSEVLLFDLPPV"
     gene            complement(84202..85239)
                     /locus_tag="RHX79_000156"
     CDS             complement(84202..85239)
                     /locus_tag="RHX79_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDV2195378.1"
                     /translation="MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ
                     APIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTL
                     AQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVA
                     ETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGD
                     LKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGV
                     LEYVNDEGVTVREEMKPEMGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFE
                     QASPSTVTLAK"
     gene            85571..86059
                     /gene="yhhY"
                     /locus_tag="RHX79_000157"
     CDS             85571..86059
                     /gene="yhhY"
                     /locus_tag="RHX79_000157"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDV2195379.1"
                     /translation="MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQER
                     LADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMRE
                     MIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMAR
                     VK"
BASE COUNT        20823 a        23462 c        21624 g        20229 t
ORIGIN      
        1 actggtaggt gcagtactgg ctacgttaac tgcatgtact ggtcatattg aaaaccgtga
       61 taagaactgc tcttacgact acctgctgca cccggcaatt tctatttcta aaatcattgg
      121 cggttgcggt cctactgcac agtaagtctc tgacagaaat cggctaacac cggtttaatt
      181 gcccgacgcc ctctggattt tccgagggcg tatttgtttc tatatccttc ttgcccccgc
      241 ccgtaaaaat attttcactt taaattcaat ttgataacta catccattag ccacagcgcg
      301 atcctgtgcg aaattttgtg atcttcctcc acattacata acatcatatg ttgttatatt
      361 catcatgtat tgtcatgtta ccttttaaat gactgcaaac tctcccctac aacgtattgg
      421 acaagaaaaa ggtatcgcta tgggaagcca ggaactccaa cgcaagctcg gattttgggc
      481 cgttcttgca atcgccgtcg ggacaaccgt cggctccggt atttttgtat ctgtgggtga
      541 agtggcaaaa gcagcgggca cgccgtggct tacggtgctc gcgtttgtca ttggcgggtt
      601 aattgtgatc ccgcaaatgt gcgtctatgc ggaactatcc accgcttatc cggaaaatgg
      661 cgcagattat gtttatctga aaaatgccgg aagccgaccg ctggctttcc tctccggctg
      721 ggccagcttc tgggccaacg atgcgccgtc attgtcgatt atggcgctgg cgattgtcag
      781 caatcttggc tttttaacgc ctatcgatcc gttgctcggt aaatttatcg ccgccggatt
      841 aattatcgcc tttatgttgc tacacctgcg ctccgttgaa ggcggcgcag cgtttcagac
      901 gctaattacc atcgccaaaa ttatcccgtt cactatcgtc attggccttg ggatcttctg
      961 gtttaaagcg gagaattttg ccgcccctac caccactgcg attggcgcaa cgggcagctt
     1021 tatggcgctg ctggcgggga tctctgccac cagttggtcg tataccggca tggcctctat
     1081 ctgttatatg accggcgaaa ttaaaaaccc cggaaaaacc atgccacgag cgctgattgg
     1141 ttcctgcctg ctggttctgg tgctctacac cctgctggcg ctggtgattt ccggcctgat
     1201 gcccttcgac aaactcgcca attctgaaac gccgatttcc gacgccctga cctggatccc
     1261 cgcactcggc agcaccgctg ggatctttgt tgccatcacg gcgatgatcg tcattcttgg
     1321 ttcgctttcc agctgcgtga tgtaccagcc gcggctggaa tacgcgatgg cgaaagacaa
     1381 cctgttcttt aaatgcttcg gccatgtgca tccgaaatac aacacgccgg atgtctccat
     1441 catcctgcaa ggggcgctgg ggatcttctt catcttcgtt tccgatctca ccagcctgct
     1501 gggttatttc accctggtga tgtgtttcaa aaataccctc accttcggct ccatcatctg
     1561 gtgtcgtaaa cgcgacgatt acaaaccgct gtggcgtact ccggctttcg ggctgatgac
     1621 caccctcgcc attgcgtcaa gcctcattct ggtcgcctca acctttgtct gggcaccgat
     1681 tcccggcctt atctgcgccg tcatcgttat tgctactggt ctgcctgctt acgccttctg
     1741 ggcgaagcgt agccgccagc tcaacgcttt gtcgtaatgt tatctggaga aaataaaatg
     1801 ttggatattg ataaaagcac cgtggacttt ctggtcaccg aaaatatggt tcaggaagtg
     1861 gaaaaagttc tcagccatga cgttccgctg gtgcacgcca tcgtggaaga gatggtgaag
     1921 cgcgacattg atcgtattta tttcgttgcc tgcggctcgc cactcaacgc ggcgcaaacg
     1981 gcgaaacatc tggcggatcg cttttccgat cttcaggtct acgccatttc cggctgggag
     2041 ttctgcgata acaccccgta tcgcctcgac gatcgttgcg cggtgattgg cgtttctgac
     2101 tacggtaaaa cggaagaggt aatcaaagcg ctggagctgg gccgggcctg cggcgcactc
     2161 actgcggcgt tcaccaaacg cgcggacagc ccgattacct cggcggcgga atttagcatt
     2221 gattatcagg ccgactgtat ctgggaaatt cacctgctgc tctgctacag cgtggtgctg
     2281 gagatgatca cccgcctcgc gccgaacgcg gaaatcggca agatcaaaaa cgatctcaag
     2341 cagttgccga atgcgctcgg tcatctggta cgcacctggg aagaaaaagg ccgccagctt
     2401 ggtgaactgg ccagccagtg gccgatgatt tataccgttg ctgcgggtcc gctgcgtccg
     2461 ctgggttaca aagaaggcat tgtaacgctg atggaattta cctggacgca cggctgcgtg
     2521 attgagagcg gagagttccg ccatggcccg ctggagattg tcgaaccggg cgttccgttc
     2581 ctgttcctgc tcggcaatga tgaaagtcgc cacaccaccg aacgcgccat taactttgtt
     2641 aaacagcgta ctgacaacgt gatcgtcatc gattacgccg aaatttcgca agggctgcac
     2701 ccgtggctgg caccgttcct gatgttcgtg ccaatggagt ggctctgcta ctacctgtct
     2761 atttacaaag atcacaaccc ggatgaacgc cgctattacg gtggtctggt ggaatattaa
     2821 tccctctccc ggcccggcaa cgggccgaat ttacgcaagg agttacccga tgaaaacagg
     2881 tatgtttacc tgcggccacc agcggctgcc tattgaacac gcatttcgtg atgcaagcga
     2941 gctgggttac gacggcatcg aaatttgggg cggtcgcccg cacgcgttcg cgccggactt
     3001 aaaagcgggc ggcatcaaac aaatcaaggc gctggcgcag acgtatcaga tgccgattat
     3061 cggctatacg ccagaaacca acggctatcc gtataacatg atgctgggcg atgaacatat
     3121 gcgtcgcgaa agcctcgaca tgatcaagct ggcgatggat atggcaaaag agatgaacgc
     3181 gggttatacg ctgatttccg cggcccacgc gggctatctc acgccaccta atgttatctg
     3241 gggacggctg gcagagaacc taagcgaact gtgtgagtac gcggaaaaca tcggcatgga
     3301 tctgatcctc gaaccgttaa cgccgtatga atcgaacgtc gtgtgtaatg ctaatgatgt
     3361 gcttcatgcg ctggcgctgg tgccttcgcc gcgcctgttc agcatggtcg acatttgcgc
     3421 gccgtatgtc caggcggaac cggtgatgag ttatttcgac aaactgggtg ataaattgcg
     3481 tcatctgcat attgtcgaca gcgacggggc cagtgacaca cattacattc ccggcgaagg
     3541 caaaatgccg ctgcgggagc tgatgcgcga tattatcgac cggggctatg acggttactg
     3601 cacggtggaa ctggtgacga tgtatatgaa cgagcccaga ctctatgcct gccaggcgct
     3661 ggaacgcttt cgcgcgctgc tgccggagga tgagagatga aaaccctggc gacaatcggc
     3721 gataactgcg tcgatatcta cccgcaactg aataaagcgt tttctggcgg taatgcggtc
     3781 aatgtggcgg tgtactgcac tcgctacggc atacagccgg gatgcattac ctgggtgggt
     3841 gacgatgact acggcacaaa gctgaagcag gatctcgccc gcatgggcgt cgatatcagc
     3901 catgtccata cgaaacacgg cgttaccgca caaactcagg tggaactgca cgacaatgat
     3961 cgcgtttttg gcgactacac cgaaggcgtg atggccgact ttgccctgag tgaagaggat
     4021 tacgcctggc tggcgcagta tgacattgtg cacgcggcaa tctggggaca tgcggaagac
     4081 gcattcccac agctgcacgc tgcgggcaaa cttaccgctt tcgacttctc cgacaagtgg
     4141 gacagcccgc tctggcagac actggtgccg catctcgatt ttgcctttgc ctccgcaccg
     4201 caagaagacg aaacgctgcg tctgaagatg aaagcgattg ttgcccgtgg cgcaggaaca
     4261 gtgattgtca cgctgggtga aaacggcagc attgcctggg atggcgcgca gttctggcgt
     4321 caggctcctg aaccggtgac ggttatcgac accatgggtg ccggagattc gttcattgcc
     4381 ggattccttt gcggctggtc tgcggggatg acattaccgc aggcgatggc gcagggaacg
     4441 gcgtgcgcgg cgaaaaccat tcagtaccac ggtgcctggt aggtataacg ttggcgtgag
     4501 catcttcacg ccaacgtgct gttacttgcc ggaaaacgac cctataatcc gagtaattca
     4561 ttctttattt cagggtcgat tatgtcagct acggaccgct actctcatca actcctctac
     4621 gctaccgtcc gccagcgact gctggatgat atcgcgcagg gggtttacca ggccgggcaa
     4681 cagatcccta ccgaaaacga gctttgtaca caatataacg tcagccgcat taccattcgc
     4741 aaagccatca gcgacttagt ggcagacggc gtactgatcc gctggcaggg aaaaggcacc
     4801 tttgtacaaa gccagaaagt tgaaaacgcc ctgcttactg tcagtggttt taccgatttt
     4861 ggcgtctcac aaggcaaggc gacgaaagag aaagtgatcg aacaggaacg ggtcagcgcc
     4921 gcgccgtttt gcgaaaagct gaacatcccc ggaaacagcg aagtgttcca tctctgccgg
     4981 gtgatgtatc tcgataaaga gccgctgttt attgatagtt catggatccc gctgtcgcgt
     5041 tatcctgact ttgatgagat ttacgtcgaa ggaagctcca cctatcagtt atttcaggag
     5101 cgttttgaca cgcgagtggt cagcgacaaa aagaccatcg atatctttgc cgccacccgc
     5161 ccgcaggcaa aatggctgaa atgcgaactg ggcgaaccgt tgtttcgcat cagcaaaatc
     5221 gcctttgatc agaatgacaa accggtgcac gtctccgaac tcttctgccg cgccaatcgc
     5281 atcaccttaa ctattgataa taaaagacat taaccgtagg ccggataaga tgcgccagca
     5341 tcgcatccgg cgatgctggc gcgttgaatt ttacatcccg tacgttcccc tcaccctaac
     5401 cctctcccca aaggggcgag gggaccgttc agtacggaat ttagcttgac ggtgctatcc
     5461 agcattaaat actggcaata ctctcacgca aaatccgcag caccgtctct tcaccgctgc
     5521 gattcgggtt aatgcgaatc gcacaatgtt ctgattgtgg attcgcctgg cgaaacgttc
     5581 cggaaaggcg ataaaagagc ggcgggattt catatttcga ctctgcaccc accgggtaag
     5641 gcaaggcacc gcgcttttgc gcctcttcca gcactctggc ggcaatcggc tgatgaaact
     5701 cgacaatcaa caccttcgac tgcgcattag caatcaccgc gcttttcact tccggcaccg
     5761 caccaccgtt aagcaaagcc agcaaccgtt cagatacccc tgcctgcacc gcgtgcatca
     5821 ctggcgcaaa caccagacca cgcaatactt ccagcgcctg tgcgccctgg atctggctac
     5881 cgccggagta aagcgtggcg cgaatacggt tgataacatc agcatcgccg accactgcac
     5941 caacaccctc tggcccaaat agcttgaagc aggaaaatgt cgagacattc gcgccgcatt
     6001 cacagccgat tcgcgccacc ttcatcaccg catagttgtc atcggttaac gctggaacac
     6061 ctgccgcgcg caacgttgcc agcacatctg ccagcacgta gctgtcctgc ggctgctggc
     6121 gcgtatgctg caccagcgcc gcatccggtt gttgctcgtc gacgacctgc ttcagtgccg
     6181 acaggtcatt gaaatcaaca gtaataagcg tcagccccat ctgctcaata ataacccgtg
     6241 tcgtcgggta aacaggcgcg tcatgcacta gaagacgctg ccccggtttg agcaaagccg
     6301 ccagcccggc gcgaatcgcg ccagtccccg cgccctgcac cagcgccgca gcctgtgcgt
     6361 gaaatgcatc agccagcacc tgttccacac gctgggtaac gcgcggttga ttcagtcctg
     6421 gcgttaagcc taaatcaccg ccagtaagaa actcgctgcc ggggaaatgg cgacaaatgc
     6481 tatccaccag cgcaaactgc ttttgctgcg cctcaataat cgtcaggctt tgcagaggaa
     6541 acgtcttcat aggtgccttc cttaagccgg aacgaacagg ccaagccagt aaagaacatt
     6601 cagcagaata ccggtgatca ttactgccac gaccggtgcc gccattttct gtaccggacg
     6661 gcccagggat tcgttgagga agtaaatggc aaccgcgata gagaatccgg tataacccgc
     6721 catcttaatt gctgcgaaaa tcgaaccgac cagcagcgcc acttccatca gcatattcat
     6781 ggcgttacgg atgttatccg acgcattacg caccgacgga tagcgcccca gccatttgcc
     6841 gatcgaacga agcaataaaa cttctgccga aataaccact gcacctaata ccgctgcaac
     6901 catcggattc ggcgagagat agcccaccgc ataaacaaag gtaaagcccg caactgcata
     6961 cacacccgtt gctaacgcgg tggtggcaat caacggtaca aaacccagcc cgcgcataaa
     7021 ttctgccagt gccgcctggt tgatcagcgt ttgcgattgt tccggcgtta cgcctgcgga
     7081 gtacgctttc tccagagtga agatcgacac ttcactgccg gcgaaaatct tcatgctggc
     7141 aacggcggca atcaatgctc ccacgatggc gatatagggt aagtttttga taatccgcga
     7201 cgtgcgttct tcaaacaccg aaagcccgct ggcatcaata tcattttcat cacgatgacg
     7261 caggtcgtga gttatcgcga tccccagcag catcaccatg ccaataaaga tttcgatgga
     7321 ttcagggtta agatgtggga aatagcgcac gactaccaca cgggtcatca gaacaaccac
     7381 ggcggcgacc agactttgct tccagccaaa ctggtagaaa atcgccacca gcgggaacag
     7441 tgcaaaagca gaaaccaccg gcgagcttaa ttccccgagg ctacctaata catccaccgg
     7501 cagcgcggtc agcagctggt ttactggcaa caggcaagta aggatcaaca cgccccagat
     7561 agcgccaaga ccaaacgcca tcaggctgtt tatcgccagt acgccgagga tatcggtagg
     7621 aagaaagagt aaccatgcgt tgagcagccc ggttttcagg gtaaaagaga tccccaccga
     7681 ggccacaaaa ccaatgctca gaccaaaagc gatactcccc gcctcgcgac ggttcatata
     7741 gccttcaatc agttgcggca ggatcgggcg gatgccgtca tgaaaaacag ccgccgagcg
     7801 atgcgccaga agcgatgtca tacccgtcag gcacgccacc acgataatct gaatatacag
     7861 atccatagtc gtgcctttta tttcagatgg ttaatcagca tcggaatcgc gtgttcgacg
     7921 tgctcaacgg aaaggccaaa cgccactttc ccttcggcga tcattttggc gatatgctcg
     7981 tctttcgctt taatgcctgg tttggcaatg gtgcaacttt tgttatagcc aatcaccgcg
     8041 atggcaatcg acaatgccgc gcccgcaccg gtattacacg caccgatgta gtaatccagt
     8101 tgcccggatt tcactttcat tgccgcttcc atgtcgttgt gaatgaaaac ttcaaaactg
     8161 ccaggagccg tcgcttcaat ggttttttta atctgctcac gctgtaagcc tgcaacgcca
     8221 atctttttca tgagtctgtc cttattggaa aaattgagag ggattttcac gtaacatcac
     8281 atccacatcg gcctgactga atcctgactg gcgcaattgc ggaataaagg tggtcaataa
     8341 atagtcatag ccataaccac cattggcttt taaatgggag cggcgcgtaa tatccatcga
     8401 cagcatgacg cggttcagca acccacggtc acgtagcgcg tggagcatcg caatgcgctt
     8461 ttcgtccggg tagtaactgt tcttaccaat ggtgtcgaac tgcacgtacg cgccgagatc
     8521 gatcatcttc aaaatgttgt cgagattgtc tttcagatcg cagtgaccaa cggtgacgcg
     8581 cgaaagatca actccgtggg cttgcaacag agccagttgt tccagcccca tggtgctgaa
     8641 cgaagtatgc gtggagatcg ggcgtccggt ctggttatgc gccagcgcag cggcaataaa
     8701 caccttctct tccagcggcg taatcttccc ttcgctagag ccgatctccg cgataatccc
     8761 ggctttcagg tcggtgccat cgataccctg ttcaatttca tcgaccatct cctgcgccag
     8821 ttcctgcacg ctgcgggtcg ccacatgctc cgggaaaaaa gcgtcctggt aataaccggt
     8881 gcaggccacc acgttgatcc ccgtctcgcg cattacatcg agcataaatt gcgcattgcg
     8941 ccccatgtaa cggttggtca tctcaatcac attacgcacg ccccgggtca tcaggtcgtt
     9001 catctcctgg caaatgaacg catactgatc aaggcggcag tccacgttgt ttttaaagcc
     9061 ggagagatca atatgcagat gctcatgggc cagggtgtaa cccgtcggat caatactcat
     9121 agggtgtctc ctgcaaaccg gagggaggaa agaaaagagc gaccattttg tggcggtggc
     9181 gcacggaaaa attcacacac ggtagccccc acatcagaaa gcgtggtgcg tacaccgagt
     9241 tgcgtgtgga ccagcccttg ctgataaacc agcactggca ccacttcacg ggtatggtgg
     9301 ctgtgaccaa tggtcggatc gttaccgtga tccgccatca cgaccaggca atcatctggc
     9361 tgcatcgcct caacaagccg ggcaaggtta cggtcaacga cctgcaaacg ttcggcataa
     9421 cgtgcgacgt cttctgcatg accagcgagg tcggtttcct ggatattgat gcaaataaac
     9481 gccgtcggat gcgtgttaaa ttcgtcgagg gtgatatcca taatccgctg gctatccacc
     9541 agattttgcc agctcacgcc ataaggattg ttgacgatat ctgccacctt acccaccagc
     9601 acggttggca cgcctgcttc atacagtttt tgtggcacct gcactttttc atcgacgcca
     9661 tagcccatat gcacgacctg gaaaccgttg tcataagcgc cagaacgcgg cgcattgata
     9721 ccaataaagc gcccttcttt gctttctgcg gcatcgagaa tgcgttgact gtcggttaac
     9781 aggccaccaa atgtaatgac ccgaccgacc tgtacctgct cacgcacgat acgaccaatt
     9841 ttgattgcgt cgtcaaaaga gatcacagag agattggcgg taatgttata gacctggcct
     9901 aaatccgcct cgagattatc gccaatcgca accgcctgat tgacccacag aaattgcagt
     9961 tcatcgccac ggcgctccac ctgccaaccg gcggatacta atgcctgctc aacacggtca
    10021 atcacatcgc aaaaaggcat ccgcagcggc ggtaacgggc gcgtgcctaa aatttcctga
    10081 tgccccataa aggtatcgcc accttcatgt tgcagctctg ccacgcccca ggttgcggaa
    10141 tctgacggct gcatatcgcc tggcgcataa cccaatgcgt tgattagccc cagcttctcc
    10201 agcgttggta gctgcaaatg cggcaactgg ctcaggatgt gaccacaggt attcgctccc
    10261 gcatcttgcg gacgcaccag cgtgacatct ttcattgccc ctacgccaaa gctatcaatc
    10321 actaacacca caaatcgcgc cattacgccc ccagagagtt tccaagactg tcataacgac
    10381 caacgatttt cggttcgcca cggtgaatac cggacaccag caccacatcg ctacgggtga
    10441 caaaaatctg cgtgcggaaa cagagcacca ctgcactgct caccggatac tcgcctgcca
    10501 gcggcagggt gtagtcgata ctgctgtcat ccacagtttt gagattggtt tcagtaatct
    10561 tttgattttc tggcgtaaac accagcgcat gttgcgcatg accacgacgg tagtaaccgc
    10621 cgccgtagca gtagctgtcg ccacggaaat gatgggagat ttcacttaac cagagcatcg
    10681 cgatacgttc aggctgatcg ccctgctggt ttgccggaat agtgcccgtc agcgcatgac
    10741 cgggttcggc atgagtcaca ccgtattccg ccagcaatgg cagcgaagtg cagctggtcg
    10801 ctgaaggcgc gttcagttgc tcaagtgcaa taccagattt cgccagttga tcccgtgcct
    10861 gtatcagcgt gtgaagattc ggtgtcggca aaacttttcc ggcagcctca tcccaaagca
    10921 ggcaagggaa atgggtaagt ccggctaaat gcagccccgg cagtttctta atttcagcaa
    10981 ccacctcgtg cagcgaatgc tgtacaaaac cgctctcctg ccccggataa agaaaatcat
    11041 cgtcgctata aactttgagc agcacaaact gcacacgtcc ggccttcacc gctgccgcag
    11101 aaacttcccg cgctttgtcg agagtaaaca cggtgatgac gtcggtgccc tgttcaacgg
    11161 cgtcagcaac ctgatgacaa gggatttgta ccagatgccc ctgatgcgcc accgacaaac
    11221 cagcgcggcg catgactcgc gcctctttgt aatccaccgc cacaatgccg ctgtaaccta
    11281 atgccagcaa tttttccgcc agccatgggt tacggccaaa ctgcttggtc atcagataca
    11341 gttcaatgcc gtaaagccgc gccgtctcaa tcagtcgctt accgttttcc agtacctgat
    11401 ccacgtcgat cacccagctg tccggggcga tcttgccctg ctgccacaaa cttagtgcgg
    11461 cggaaatcag cgccgggttc tggcgtttca atgcttctac aaacatcttg ttgcctcgtt
    11521 tctgttcctt gaattaaata ttcatttttt tgaatattta ggttgtgcga cgtggatttg
    11581 tcgggagctt caaacctctt cgttagcagc catccataat ccataaaggt tggccagcaa
    11641 atagccttct tcacacgggt taacttccag tgcgaattcc ttcaacaaca cctgatgcaa
    11701 ttgcacaacg gcttgccagt ggctggattg cgccagctct gccagcaatt cgttatccag
    11761 cggctctatt tcttcaccac ggcgactgcg catcagtgca ctcgccatat gtgtcatcgc
    11821 catcgttcct tgctcactgc gcaccggcag atggcactct gtttccagta cgttgacgac
    11881 ctgcatcatg cctttgcaga tgtccttatc aataacgcct gcctcgcaaa gcaggttgag
    11941 tctggtttcc atatcagatg cctttcgttt aataactcgg ttcctgttcc ccactcacta
    12001 cccgttgttg atgggcgagc agggcgtgtt tatctacaac ggcacgcagc agttgttgca
    12061 ttgggtaatc atcgactcgc gtcaggacca cggcttcggt ggcctgtaaa aatcgcggat
    12121 cgtctgtgag cggcgtcgcc tctaatccca gcatggtcag ttcgttttcc gccaccacgt
    12181 tccagatcac cgcatcgaca tcgcctttaa caatgcgttg taaactctcg tgataagaga
    12241 gatcgactcg ttccacatca ctaccgccaa aaaaaacatc ggtcatgatt ttctgatccg
    12301 ccgaacggtt atccagcccc acgcgcttca cgtttgcgga ctcgccttta cggcaaatca
    12361 actggtgctc gccaacgtag gtgtgcggcc ccaactccag cgcgaggcaa aacccttttt
    12421 gcgtgagata actttccgcc gccagtcggg aaaccaccgc catgtcatac acgccgttaa
    12481 gtaaacactc cacgcgaata tccgcgccgc gcatatgcgc atagtaaaaa ggaatgccat
    12541 caaactgggc tttcaatccg ctcgctaaac cttcgtacaa gcgggtatag ggcaaaggca
    12601 tcgcacatac cacgttgttg atatccacat gactcagcaa tgctttgtta tccatctcga
    12661 ccagataact gccattgcgc ccacggcgtt caatccgtat cgctccgctt gattccagcg
    12721 ttttcaacgc ggcctgcgtc aggccaacgg atgaacggca ttcagttgcc agctcatcta
    12781 tggttttcaa cctattaccg catttttcac ccaacaaata acgggccagc gtcgtgataa
    12841 cgacgccttc ttttttgata aacgttcgac gcataatata ttttcaataa aatgaatgtt
    12901 tatatcttca ttaaaatgaa gataagtggc aactgtgaga tgtggaaacg gcgaggcgct
    12961 tcacattttt tcggattatt gcaaatgagg ataaaaaaac cgggtttccc cggtttcaga
    13021 gtgatgacga agtgatttat tcgacaatgc gagcaaaggg taattcccac tggcgcttgc
    13081 ctgctcccct caccctaacc ctctccccaa aggggcgagg ggaccgtccg agcgttttga
    13141 tattacggct tcgccacaaa accaatcgct tcgtacaccg ctttcagcgt acgggaagcg
    13201 tgtacactgg ctttttctgc gccgtctttc atcacctgtt gcaggaaggc ttcatcgttg
    13261 cggaaacggt gatagcgttc ctgcaattca gtcagcatac cggaaacggc atcagccact
    13321 tcacctttca gatgaccata catcttgcct tcgaactgtt tttccagttc tggaatgctc
    13381 tggcccgtta ccgcagaaag gatatccagc aggttggaaa cgcccgcttt gttctgcaca
    13441 tcgtagcgaa ctaccggcgg ctcgtcagaa tcagtgaccg cgcgtttgat tttcttcact
    13501 accgatttcg gatcttccag caggccgata acgttattgc ggttatcgtc agacttggac
    13561 atcttcttgg tcggctccag cagcgacatt acgcgcgcgc cagatttcgg aataaacggc
    13621 tccggcacct taaagatctc gccatacagc gcgttgaaac gctgggcgat atcgcgactc
    13681 agttccaggt gctgtttctg gtcttcaccc accggtacca gattagtttg atacagcagg
    13741 atgtccgcag ccatcagcac cggatagtca aacagaccag cgttgatgtt ctcggcataa
    13801 cgcgcagatt tatctttaaa ctgggtcatg cggctcagtt cgccgaagta ggtatagcag
    13861 ttcagtgccc agcctaactg cgcatgttct ggtacgtggg actgaacaaa aatggtgctt
    13921 ttctcaggat cgataccaca agccagatac aaggccagcg tatccagcgt cgctttacgc
    13981 agcttctgtg catcctggcg cacggtgatc gcgtgttggt caacgataca gtaaatgcaa
    14041 tggtagtcat cctgcatgtt tacccactga cgcagcgcac ccatgtagtt accaatggtc
    14101 aattcacctg agggctgtgc gccactaaaa acgatgggct tagtcatttt tcgattcctg
    14161 attttcgcta tgcggaagcc ctaatgcggg cagaaggtca tttatagact gataaattac
    14221 atcaggctgg ctgagatcga tagcctcgcc gtagttatat ccgtaggtta agccaactga
    14281 tgggcaacct gccgcttttg ccgcctgaat atcattgcgt gagtcgccga caaacagcat
    14341 ctgttgtggg gcaattccca tccgctcagc caccagtaac agcgggtccg gatgcggttt
    14401 tttgttttgc acatcatcgc cgccgataac cacgctaaag tatttggcaa tatctaaggc
    14461 ttcgagcagc ggcgcgacga acggcgtcgg tttgttggtg accaggccta gcggcaggcc
    14521 tttagcctgc aacgcgccca acgtatcggc aacgtgcggg aacaaaaacg tcccctcttc
    14581 ggcaacctcg ctatagtagc gatcgaacag tttacgcaga atacgtacct gttcttctgc
    14641 cggaatgtcg tcatcaacgg gcggtttacc cattgtttta cgcagagtcg cacgttcctg
    14701 acgcgcccag gtcaatgcgc gctccatcag aacatctgcg ccgttaccaa tccaggtaat
    14761 aacgcgttct tcacctgcga tgggcaactc cagcgcatac agcgccatat ctaccgcagc
    14821 agcaagaccg ggagcactgt cgaccagcgt accatcaaga tcaaaagcga cgccgcgaat
    14881 atcttcaaac ttattcatga cttacctttg ccagttcact gcgcatttca tcaatgactt
    14941 ttttgtagtc tggctggtcg aagattgccg aaccggcgac gaacatatcc gcgcccgccg
    15001 cagcgatttc gccaatgttg ttcaccttca cgccaccgtc cacttccaga cgaatgtcaa
    15061 agccagactc gtcgatacgg cgacgtactt cgcgcagttt atccagtgtt tgaggaatga
    15121 aagactgacc gccgaaacca ggattgacgg acatcagcag gatcacatcc agcttatcca
    15181 tcacgtaatc cagatagctc agcggtgtcg ccgggttaaa taccagtccc gctttacagc
    15241 cattttcttt aatcagttgc agcgtgcggt caacatgctc ggaggcttct ggatgaaagg
    15301 taatgatgct ggcaccagcg gcagcgaaat caggcacaat gcgatcgacg ggtttcacca
    15361 tcagatgtac gtcgataggg gcggtaatgc catagttacg caaggatttc agcaccattg
    15421 gcccaatcgt cagattggga acatagtggt tatccatgac gtcaaaatgc acgacatcag
    15481 cgccagctgc cagggctttt gcggtatctt cacccaggcg ggcaaaatca gccgacagaa
    15541 ttgagggggc aatcaaatac tgtttcatcc gcttctcctt gagaattatt ttttcgcggg
    15601 tgaaacgact cctggtttgt acaaagccag cagttcgtcc acctttttac gtgtgccgcc
    15661 gttgctgctt atactgcgtc gaactttgac gacatgcaat tttgcgcgct gataccactc
    15721 acgcgttaac atcgtatcgt gattggagat cagcactgga atatggcgct caaccagacc
    15781 ttcggcgatc tccgccagat gcgcttgttg ttcaagcgta aaactgtttg tgtgatacgc
    15841 cgtaaagttg gcggtcgcag acagcggtgc ataaggcgga tcgcaataga cgacggatgc
    15901 atcatctgcg cgcgccatgc tatcggcgta agactcacaa tagaaaaagg cattctgcgc
    15961 tttttcagcg aagtgataca actctgcttc cgggaaatag ggttttttgt agcggccaaa
    16021 cggcacgtta aactcaccgc gcagattgta acgacacagg ccgttgtaac cgtagcggtt
    16081 caaatataaa aacagtaccg cccgacggaa cggatcctgg cttttgttga actcttcgcg
    16141 gaactgatag tagacctcgg cgcaatttgt ttcgggaaca aacagctcgc gtgcggcctg
    16201 tacgtactca tcagtacgca tcttcacaat gttatagaga ctgatcaggt cgctattgat
    16261 atcggcaagg atataacgag aaaagtcggt gttgagaaac accgacccgg cacctacaaa
    16321 aggctcaacc agacattcgc ccttgggcaa atgccgttta atatcatcaa gcaggggata
    16381 cttgccccct gcccacttca aaaaagcgcg atttttcttc atgctgacta actaattaca
    16441 ccttctccgg ctgtggagaa agctccgaca gcatccagcg cttcaggcaa ctcccgcaac
    16501 gataacccat tgcgggagat aaccttgatt acttcagatc ggcctgtacc tgacgcagcg
    16561 gtttcgccca cgggtttttg gcctgaacat ctgctggcaa tgtagatacc gcttttttcg
    16621 cctcttcttt cgaagcgtac acgccagaaa ccaggacata ccacggctga ccattacgcg
    16681 tcgtttcata gacaacgtag tttttcagat tctctttctt cgcccaaccg ttcaggttgt
    16741 cgtagttaga ggaactgctc agctgcagag tgtaatggct ggacggtgcc gatttcaacg
    16801 aaccaacatt acctgcggtc ttccctccag cggctggtgt tgccgtggtt tgcgccgggg
    16861 atgccgtctg tactggagcc gtagtcgccg tctcttttgg tgctggcgca gaagtcgcag
    16921 ccggtgcctt cgtgctcgcc acaggagcaa ctggttcagt acgtttcggc gtctgtgcta
    16981 ccggcttcgg ctccgttttc acggttgctt gcggtttttt cggttcaatc accgcctgct
    17041 gacgagctgg gcgtgtagtg gccggacgtt cagcggtttg cgttttcgcc gtgtcacgcg
    17101 atgcattgcc attgcgaaca ggcgcgacag tcgcgggttc agtcggcaac gtggaattga
    17161 ccgccacatt gttcagcggt tgctgatttt gtggctgggt cagcgcattg ttcaggtcac
    17221 cctgcacttc aacacgttgt tgaccatccg ttgccgccgg ggtttgccct tgagtcggcg
    17281 tagaagagat cggcggcaga gaaacatcct gctgagtatt ttccgcagac gtggttcccg
    17341 gcgctggctg caccccattc gcctgatcgg tcgcattgcc agcaagatca atactcttct
    17401 cgccagacgc ggtttgatcg ctggaagtgg tcgagggggc ttttagcgca gaaccgatac
    17461 cgatgatcaa cagcagtaga accagaatgc cgacgcccat catcatatac tgacgagaag
    17521 cgggtttact ggctgctttt ttgcgcttac gcggacgacg ctctacgcgc tcttcatcca
    17581 cggtttcatc ttcggattcg tcaatttctt cttcgatttc cggttcctca ttgcgctctt
    17641 tttgcgcacg agtcggacgg cgatcgtcag tgtcatcaag ttcaatatca tcaaaattga
    17701 tctgcggttc gccacgttca gtacgctcag aacgttcaga agattgacga gaacgaccag
    17761 tacgacgatc gctgggatcg ggtttcagct cgtcttctgg tttgaattca tccatttaac
    17821 accccactaa aaggttaatg cttaccacgt tgcaattaac ctgaagctaa tagaccgctt
    17881 gataagcggc ctgacctttc ttgttgttac gctgattgac aatcggcaat ggcgttaaga
    17941 acaagctcgt gcgaaacgcc gctgcgaact tcactcttac caattgccaa cggaagaatt
    18001 aagcgtatct ctcccgcaag gactttcttg tcacgcagca tatgcggtaa atacgcctgc
    18061 gcggacattt cgcgcggccc attgaccggt aacccagccc gcttgagcag ggttataata
    18121 cgctgcgttt cggcagaact aaactgcccg agacgttccg acgtccgcgc cgccatcacc
    18181 atacccgcag cgaccgcttc accatgtaac caattgccat accccatttc agcttcaatg
    18241 gcatgaccaa aggtgtgtcc cagattcagt aaagcacgta acccggtttc gcgctcgtcg
    18301 gcggcgacaa cttctgcctt cagttcacaa caacggcgaa tacagtacgc cattgccgga
    18361 ccgtccagac gcaacaacgc atccagattc tcttccagcc agttaaaaaa cgcaccgtca
    18421 agaataatgc cgtatttgat gacttctgcc agccccgacg ctaactcacg cgggggaagc
    18481 gttttcagac agtcgagatc caccaccact gaagcaggct ggtagaacgc gccaatcatg
    18541 tttttaccga ggggatggtt gaccgcagtt ttgccgccaa cggaggaatc gacctgcgac
    18601 agtaacgtcg tcgggacttg aatgaaacga acaccgcgct gataactcgc cgccgcgaag
    18661 ccggtcagat cgcccactac gccgccgcca agcgccacca gcgtagtatc gcgaccatgc
    18721 ggcttttgta acaacgccgt aaagacggta tcgagtacag ccaggctttt atactgctcg
    18781 ccgtcaggga ggataacgct atcgacgtta acacccgcct gttcaagtac gccgcggacc
    18841 ttatcgagat acagaggagc cagggtttcg ttggtgacca acatgacctg ctcgcccgat
    18901 ttcagcggta agaatgaagc tggttcatta aacaaaccag atgcgatggt aattgggtaa
    18961 ctacgttccc cgagagtaac gacaatcctc tccataacgc gacatccacc ttaattactg
    19021 tacccgcaga cgagtgtata taaagccaga attagttgct ttccagcatg tgaataatct
    19081 ggtttgcaac cactttagcg ctttgatcat cagtacgaat ggtcacgtcg gcaatctctt
    19141 catacagcgg attgcgttca ttggccaacg cttccagaac ttcacgcggc ggtgtttcaa
    19201 cgtgcagcaa cgggcgtttt ttatcacgct gcgtgcgtgc aagttgcttt tcgatggtcg
    19261 tttcaagata aacgacaacg ccacgagcgg aaagacggtt acgcgtttca cgggatttca
    19321 cagagccgcc gccagtagcc agcacaatac cctgtttctc ggtcaactca ttgatgacct
    19381 tttcttcgcg atcgcggaag ccttcttcgc cttctaaatc gaaaacccag cccacatcag
    19441 ctccggttcg tttctcaatc tcttgatcgg aatcgtaaaa ttccatattg agttgttgag
    19501 ctaactggcg cccaatagtg ctttttccgg cacccatagg cccaaccaga aagatattgc
    19561 gtttctctgc cattttttcg gtactactaa gactattcgt taatgataaa cccgcttcgc
    19621 tcagagagcg ccgcaggaca tgaactgaaa cctcataaga tattgcgaga gtcagactga
    19681 aaattatctc aatactccag cgggtttggc aactgaataa atcacccatc cctctgcata
    19741 tctggtcgct gcaagcgcgc tgccttgcta ccaccgctct ggcgataaat caccgggtaa
    19801 gattagcgta aaaaagacag caaaatgccg cctgaatgat aaatcatcat catggaacgc
    19861 aggcagcgaa gagcaccaac tctcaaatcg gtactccttg tatgctaaat acctgcgcgc
    19921 gtcaaataga tgaaacacgt tcagcataaa aacattaccg cttttacggc tgtttactca
    19981 ctggaaacca gtcgtggcgt gataaacacc actaactcgc gtcgttcatc ttcttttccg
    20041 tcatgacgaa ataattgccc gaaccaggga atgtcgccaa gcaacggtac gctatcctga
    20101 cccgatttat ttttacgggt aaaaatgccg cccagcgcca acgtttctcc gcttttgacc
    20161 tcgacctgcg tttcgatctc ctgcttatca atcgccagca cttcgccatc ggcctgctgt
    20221 agcacctgcc ccggaacgtt ctggctgatg tgtaatttca gccggatgcg acctttttgt
    20281 aacaccgtgg gcgtgacctc catccccagg acggcctctt taaattccac cgacgtcgcg
    20341 ccactttccc cgctggaaac ctgatatgga atttcgctcc cctgtttaat gctggcaggc
    20401 tgaagatgtg aggccagcag acgcggactg gcgataatat ccagctgctg tttttgttcg
    20461 agcgcggaaa gctcaagatc cagcaagcgt ccgttgatgc gcccaatgtt aaaaccgaca
    20521 tgcgttgtcg ccgtcgctac ggagaggtcg ctaccaagcg tggtgacttg cccaacgcca
    20581 ccagcgtgtt gcgcatcggc cagcgtccat ttcacgccta actcacgcaa acttttttca
    20641 ttaatggtga caatatgcgc cgacagctca acctgcccga ccggcagatc catttgcgct
    20701 acccactgtt caagcgcgct taacgccgtt ttgttatctc gtagcaaaag acgattggtg
    20761 cgtttatcga cggtcatact ccctttggca ctcagtagct tctcccccgc tttcgccagt
    20821 tctcccgcgt cggcgtattg cagggttata ctgcgatttt ccagcggcag atttgcctgc
    20881 gcccgcgcct gctccgcctc ctggcgggcg atattgttat tctgccaggc aatggaatgc
    20941 actgagagaa tgttgccttc ctgccgcgtt atcagtccgg cgcttttcac tacagtttgt
    21001 agtgcctgct tccagggaac atctgttaga tgtaacgaca ccgtaccgct gacgtctggc
    21061 gacacgacca ggttcaactt ctcctgttca gccagcgcct gcaacacctg agctaccgga
    21121 acgtcatcca ccatcagcgt cactttttgc ggctttgccg cctgtacgcc gggtatcagc
    21181 atcaacagta gtgcggctat ccattgcttc atttgtatct ccttgccgtt gccacaacca
    21241 ttgtggcggt tcgcagtttg tcccggttcc cagcgttagt gcgtctggcg tcagctgtaa
    21301 aattgtccag ccgttttcca gcacatcgtt ttgctgcacc cgtcgccatt tcttttgccc
    21361 gtcttttatt acaccgatga tgtgctcgcc tcgccctacc atcccctgat agcgccactg
    21421 gctaagttcg ctaatccggc atagatcttc cggcggttta aaagggtcac gcataccggt
    21481 taaaaggcac aatgcaatac ctgccaacaa ccagcgttta accctcatgc ggtgtctcca
    21541 gttgtagcgt gaacaaaaga tcatcacctt ccacgcttaa cgaaaaacgg ctcacgctga
    21601 cgttgcgctc tgccagccgt gtaaatgccg acggcactgc ttcccacagc gttttcaacg
    21661 ccaactcacc tccctgcgcg gatggatgcc aggaaaccag ttgcgcgccg gataactgaa
    21721 aatccagagg cgaaaagggc agcgtttttt cctcgctgaa gggagtggtg tctaccaggc
    21781 gatacagtgc ggcccactgc tggtgatgac ttgcccgtag tcgaattaat gcgtcgcgct
    21841 cttcatggtg tgtcgatgat agaaaaatga gcgtaactaa catcagcaac cagaatgccc
    21901 agcaaagctg gcggaggcgg ggtgatgtgg cgaaccacca gtcaaagaac atgttcatcg
    21961 ctaaccttcc ttgttaactg atactcaaat tgccagcgtc cctgcgcatc ctgctgcgtg
    22021 gctccccgct gattgagatg aaaagacgca tcctggcgga gtgacgtttc tagtgcgttt
    22081 aacgcggtaa tgcttgttgt cagccccttg atctccagcg ttccctgctg ccagcttatc
    22141 gttgtcagcc aggcgtgctc gggtaaaagc gccgccagtg cttccagcgc agattgccag
    22201 tcgcgggtaa attgtcgctg gcgctgccgt tgcgaacgct gttcgcgtaa ctgctgttgc
    22261 tccagcaaac gtggcttcgt tatctgtaag ctgcgggcga gttgttgttc cgcctgaagc
    22321 aaaactgcgt ctatgcgcgc ttcggcgctg cctgtcagac gcagtattag cgttatcccg
    22381 acggccagca gcagaggcgc aacgaacatc agcaaccaga aacgcagaaa agcggtccgg
    22441 cgttgctgtc gccagggcaa aaaattaatt ggcgggttca tcagtacgcc ttcccaagcg
    22501 ccagccccag cgcgatggca aagtctccac ctgacggcgg tagcggcggc tgacgaacag
    22561 aaacggcctc ccagggatca aatccccctt cgccacatat cgcgacgctt tcgggatcaa
    22621 cggataacgc tgccgccagc tccttcgcgc tagtcatccc caccgccagt ttgcgccccc
    22681 agcgatagcg tgtcgcccac agccactgtt cgttatcacg ccaggccaga cattgctgat
    22741 gagaaggtaa aaaaggcagg aatcgctgta atgcactggc atccggggtg atcgcactaa
    22801 catgaacacg caacctttct gccagagtaa gcagcgttgc cagctctttg ctttgcgcgg
    22861 cagtcacgtt ataagcgggg ctgagtgagt cttcgctata atcgaagcgc agggagtccg
    22921 gatccatatc cagctcgcgg gccatcgtcc ctgacagcca ggccgtttgc tcccgctcac
    22981 caagggacat cgacgggcgc ggaaatgacc gctgtaatgt gcgactggcg ggaaacgcca
    23041 acataatgtg atgacgctgc ggcagttcgc gactccaagg taacaacgtt ttagccagct
    23101 gctgcgcatc aacaatccgc ccatctttga taatgtcgtt ctccagcggc aaccgccacc
    23161 agcgttgcaa aaagcattct tttgcgcccc gtacgatcgc aaccgctacc gcttcttgct
    23221 gttgtaaatg caaaccaatt tgccagatct taaatgccat tgtgatgatc tccttatcac
    23281 ccgtcactct gacgggtata tcaatgcgtc tggcttgcct ttatactacc gcgcgtttgt
    23341 ttataaactg cccaaatgaa actaaatggg aaatttccag tgaagttcgt aaagtatttt
    23401 ttgatccttg cagtctgttg cattttgctg ggagcaggct cgatttatgg cctataccgc
    23461 tacatcgagc cacaactgcc ggatgtggcg acattaaaag atgttcgcct gcaaattccg
    23521 atgcagattt acagcgccga tggcgagctg attgctcaat acggtgagaa acgtcgtatt
    23581 ccggttacgt tggatcaaat cccaccggag atggtgaaag cctttatcgc gacggaagac
    23641 agccgcttct acgagcatca cggcgttgac ccggtgggga tcttccgtgc ggcaagtgtg
    23701 gcgctgttct ccggccacgc gtcacaaggg gcgagtacca ttacccagca gctggcgaga
    23761 aatttcttcc tcagtccaga acgcacgctg atgcgtaaga ttaaggaagt cttcctcgcg
    23821 attcgcattg aacagttgct gacgaaagac gagatcctcg agctttatct gaacaagatt
    23881 tacctcggtt accgcgccta tggtgtcggt gctgcggcac aagtctattt cggtaaaacg
    23941 gtcgaccaac tgacgctgaa cgaaatggct gtgatcgccg ggctgccgaa agcgccttcc
    24001 acctttaatc cgctctactc aatggatcgt gccgtcgcgc ggcgtaacgt cgtactgtcg
    24061 cggatgctgg atgaagggta tatcacccaa caacagttcg atcagacacg cactgaggcg
    24121 attaacgcta actatcacgc gccggagatt gctttctctg cgccgtacct gagcgaaatg
    24181 gtgcgccagg agatgtataa ccgttatggc gaaagtgcct atgaagacgg ttatcgcatt
    24241 tacaccacca tcacccgcaa agtgcagcag gccgcacagc aggcggtacg taataacgtg
    24301 ctggactacg acatgcgcca cggctatcgc ggcccggcaa atgtgctgtg gaaagtgggc
    24361 gagtcggcgt gggataacaa caagattacc gatacgctga aggcgctgcc aacctatggt
    24421 ccgctgctgc ctgccgcagt caccagcgcc aatcctcagc aagcgacggc gatgctggcg
    24481 gacgggtcga ccgtcgcatt gagtatggaa ggcgttcgct gggcgcgtcc ttaccgttcg
    24541 gatactcagc aaggaccgac gccgcgtaaa gtgaccgatg ttctgcaaac gggtcagcaa
    24601 atctgggttc gtcaggttgg cgatgcatgg tggctggcac aagtgccgga agtgaactcg
    24661 gcgctggtgt cgatcaatcc gcaaaacggt gccgttatgg cgctggtcgg tggctttgat
    24721 ttcaatcaga gcaagtttaa ccgcgccacc caggcactgc gtcaggtggg ttccaacatc
    24781 aaaccgttcc tctacaccgc ggcgatggat aaaggtctga cgctggcaag tatgttgaac
    24841 gatgtgccaa tttctcgctg ggatgcaggt gccggttctg actggcagcc gaagaactca
    24901 ccaccgcagt atgctggtcc aattcgctta cgtcaggggc tgggtcagtc gaaaaacgtg
    24961 gtgatggtac gcgcaatgcg ggcgatgggc gtcgactacg ctgcagaata tctgcaacgc
    25021 ttcggcttcc cggcgcaaaa cattgtccac accgaatcgc tggcgctggg ttcagcgtcc
    25081 ttcaccccaa tgcaggtggc gcgcggctac gcggtcatgg cgaacggtgg cttcctggtg
    25141 gacccgtggt ttatcagcaa aattgaaaac gatcagggcg gcgtgatttt cgaagcgaaa
    25201 ccgaaagtag cctgcccgga atgcgatatt ccggtgattt acggtgatac gcagaaatcg
    25261 aacgtgctgg aaaataacga tgttgaagat gtcgctatct cccgcgagca gcagaatgtt
    25321 tctgtaccaa tgccgcagct ggagcaggca aatcaggcgt tagtggcgaa gactggcgcg
    25381 caggagtacg caccgcacgt catcaacact ccgctggcat tcctgattaa gagtgctttg
    25441 aacaccaata tctttggtga accaggctgg cagggtaccg gctggcgtgc aggtcgtgat
    25501 ttgcagcgtc gcgatatcgg cgggaaaacc ggtaccacta acagttcgaa agatgcgtgg
    25561 ttctcgggtt acggtccggg cgttgtgacc tcggtctgga ttggctttga tgatcaccgt
    25621 cgtaatctcg gtcatacaac ggcttccgga gcgattaaag atcagatctc aggttacgaa
    25681 ggcggtgcca agagtgccca gcctgcatgg gacgcttata tgaaagccgt tcttgaaggt
    25741 gtgccggagc agccgctgac gccgcctccg ggtattgtga cggtgaatat cgatcgcagc
    25801 accgggcagt tagctaatgg tggcaacagc cgcgaagagt atttcatcga aggtacgcag
    25861 ccgacacaac aggcggtgca cgaggtggga acgaccatta tcgataatgg tgaggcacag
    25921 gaattgttct gattaaaaag gcgcttcggc gccttttcag ttggctgaca aagtgcattt
    25981 gtttatgccg gatgcgggtg aacgcgttat ccggctaaca aaatcgtgaa aaatcaatat
    26041 attgcaggaa ccccataagc ctgataagcg ttgtgcatca ggcaaacttc acgcatttac
    26101 actcgcccct gccctttcaa ccattcgcgc acgaggaaca gcgcgctgac attacgcgct
    26161 tcgttgaagt cagggtcttc cagcaaatcc atcatatgcg ccagcggcca gcgcacctgt
    26221 ggtagcggct ctggctcatc gccttccagc gattccgggt agagatcttg cgcgaccacg
    26281 atattcattt tgctggaaaa gtaagacggt gccatgctga gcttcttcaa aaaagtcaga
    26341 tcgttcgcac caaatccaac ctcttctttt agctcgcggt tagcggcttc gtagacgctt
    26401 tcacccggat caattaatcc tttcgaaaaa cctaattcgt aggattcagt tcccactgcg
    26461 tattcgcgga tcaggatcag gtgatcgtcc acaatcggca caatcatcac tgcttcccgg
    26521 ttggttggac gcattcgttc ataaacacgc cgcacgccat tgctgaactc cagatccacg
    26581 ctctcgacgg taaacagtcg ggaacgggct acagtttcaa cattcagaat ggtgggtttt
    26641 tgtaatgatt tgctcatcgt gggatctatg ctgtgaaatc agcggttatt gtgcgatatc
    26701 ggacacgctt tcggcaatgt gaattgcatg ttatttacat ttatgtaact taataaataa
    26761 tcgtcctcaa atcaaattaa aagtcaatag gttgaaataa ctccaggaat ttgctgatat
    26821 tccgccttca gagggtttgc tatgatcagc ggttactgtg atgtgcttaa tgatgctcaa
    26881 gttaaactcc acgcttgccg atagccaacc gcagaatcat gtattgtgtc tggtgcgact
    26941 gaccacgcct gacagactaa gtaagatggg gaaagcatga gcaccattgt gattttttta
    27001 gctgctttgc tggcctgctc actacttgcg ggatggctga taaaagtgcg atccagacgg
    27061 cgtcagctgc cctggaccaa cgccttcgcg gatgcgcaaa cgcgtaaact cacacctgaa
    27121 gaacgtagcg ccgttgaaaa ttatcttgag agcctgacgc aggtattaca ggtgcctggc
    27181 ccaacgggag ctagcgcggc accgatctct ctggcgctga atgccgaaag caacaacgtc
    27241 atgatgctga cacacgctat cacgcgttac ggcatctcta ccgacgatcc gaataaatgg
    27301 cgttactacc tcgattcggt agaagtccac ctgccccctt tctgggaaca atacatcaac
    27361 gatgagaata ccgttgaact gatttatacc gattcgctgc cgctggttat ttcactcaac
    27421 ggtcatacgc tgcaggagta catgcaggaa acgcgcggct atgccttgca acctgttccg
    27481 tccacgcagg cgtcgattcg cggggaagag agtgagcaaa tcgagctact caatattcgc
    27541 aaagaaacgc atgaagaata tgcgctgagt cgtccgcgcg ggctgcgtga agcgttgctg
    27601 atcgtcgcct ccttcctgat gttctttttc tgcctgatta ccccggatgt atttgttccg
    27661 tggctggcag gcggcgcatt actgctgctg ggcgcaggtc tgtgggggct attcgcgccc
    27721 ccggcaaaat cctccctgcg agaaattcat tgtctgcgcg gtacaccccg tcgttgggga
    27781 ttgtttggcg aaaacgatca ggaacagatc aacaatattt cactcggtat tatcgacctg
    27841 gtctatcccg cacactggca gccatacatt gctcaggatc tcggtcaaca aaccgatatt
    27901 gatatctatc tcgaccgcca cgtagtgcgt caggggcgat atctttcgct gcatgatgaa
    27961 gtaaaaaact ttccgttaca gcactggctg cgcagtacga ttatcgctgc gggctcgctg
    28021 ctggtgctgt ttatgctgtt attctggatc ccgctggata tgccgctgaa attcactctc
    28081 tcatggatga aaggcgcgca gaccattgaa gccaccagcg taaaacaact ggctgacgct
    28141 ggcgtgcggg taggcgatac attgcgtatt agcggtacgg gaatgtgtaa tattcgcact
    28201 tccggaacct ggagcgcgaa aaccaattca ccttttttac cgtttgactg ctcgcagatc
    28261 atctggaatg acgcccgctc attaccatta ccagaatctg aactggtcaa caaagcgacg
    28321 gcattgactg aagcagttaa tcgccagctg caccctaaac cggaagatga atctcgcgtc
    28381 agtgcctcat tacgttcagc gattcaaaaa tccggcatgg tattgcttga tgattttggc
    28441 gacattgtac tgaagacagc ggatttatgt tctgccaaag atgactgtgt gcgactgaaa
    28501 aatgcgctgg tcaatctcgg caacagtaaa gactgggacg cgctggtaaa acgcgccaac
    28561 gccgggaagc tcgatggcgt gaatgtgtta ttacgcccgg tgagtgcgga atcgctggat
    28621 aacctggtgg caacctccac cgcgccgttt atcacgcatg aaacggcgcg agcggcacaa
    28681 tcactaaaca gtccggcccc cggcggattc ctgattgtca gcgacgaagg cagcgatttt
    28741 gttgatcagc cctggccttc ggcatcactt tacgactacc cgccgcaaga acagtggaac
    28801 gctttccaga aactggcaca aatgctgatg catacgccgt ttaacgccga aggtatcgtc
    28861 acaaaaatct tcactgacgc caatggtacg cagcatattg gccttcatcc gatcccggat
    28921 cgttccggcc tgtggcgcta tctcagcacc acattgctgc tactgacgat gctgggtagc
    28981 gccatttaca atggcgtaca ggcctggcgt cgttaccagc gtcatcgcac tcgcatgatg
    29041 gagattcagg cctattatga aagctgcctg aacccgcaac tgatcacccc ttcagaaagc
    29101 cttatcgaat aacacgtttg cgcggcaggt tatgctaccc tgtcgcgcaa attgcttcac
    29161 tctggagatt tccctcatgc atatcaacat tgcctggcag gacgtagata ccgttctgct
    29221 ggatatggac ggcacattgc tcgacctcgc cttcgataac tatttctggc aaaagctggt
    29281 gcctgaaaca tggggcgcga aaaacggggt tacgccacag gaagcgatgg aatatatgcg
    29341 ccagcaatat cacgacgtac agcatacgct aaactggtac tgtcttgatt actggagtga
    29401 gcaactgggt ctggatatct gtgcgatgac caccgagatg ggaccgcgtg ccgtactgcg
    29461 tgaagatacc attccgtttc ttgaggcact gaaagccagc ggtaagcagc gaattttgct
    29521 caccaatgcg catccgcaca acctggcggt aaaacttaag cataccggtc tggacgcaca
    29581 ccttgattta ttactttcca cccacacatt tggttatccg aaagaggatc agcggttatg
    29641 gcatgcggtg gccgaagcta cgggtctgaa agctgaaaga acgctgttta ttgatgacag
    29701 cgaagcgatt ctcgatgctg ccgcgcaatt tggtattcgt tactgcctcg gcgtgactaa
    29761 tcctgattcc gggattgccg agaaacagta tcaacgccat ccgtcactga atgactaccg
    29821 ccgcctgatc ccctcgctaa tgtgaaggag acgccatgaa agaaaaacct gctgttgagg
    29881 ttcgactgga taaatggcta tgggctgccc gtttttataa aacccgcgcg ctggcccgtg
    29941 aaatgattga aggcggtaag gtgcattaca acgggcagcg cagcaagccg agcaaaatcg
    30001 tcgagctgaa tgccacgctc actctgcgcc agggaaatga cgaacgcacg gtgattgtaa
    30061 aggcgattac tgaacagcgt cgccccgcca gcgaggcagc cttgctgtat gaagagactg
    30121 cggaaagtgt agagaaacgc gaaaaaatgg cgatggcacg taaacttaat gccttaacca
    30181 tgccgcaccc ggaccgacgc ccggacaaaa aagagcgccg cgacctgtta cgatttaaac
    30241 acggcgacag tgaataactg tcacctgcaa gagagatgat tatgccgcaa catgaccaat
    30301 tacatcgcta tctgtttgaa aattttgccg ttcgcggcga actggtaacc gtttcggaaa
    30361 ccctgcaaca gatccttgag aaccacgatt atccgcagcc cgttaaaaac gtgctggcag
    30421 aactgctggt tgcgaccagc ctgttaaccg ctacgctgaa gtttgatggt gatatcaccg
    30481 tacagctgca aggcgacggt ccgatgaatc tggcggttat taacggtaac aataaccagc
    30541 aaatgcgcgg tgtggcgcgc gtgcagggcg aaattccaga aaatgccgac ctgaaaacgc
    30601 tggtcggcaa tggttacgtg gtgatcacca ttaccccgag cgaaggcgaa cgctatcagg
    30661 gcgtggttgg tctggaaggt gataccctgg cggcctgcct ggaagattac tttatgcgtt
    30721 ctgaacagct gccgacgcgc ctgtttattc gcaccggcga cgtagacggc aaaccggctg
    30781 caggcggtat gttgttgcag gtaatgcctg cgcaaaatgc ccagcaggac gactttgacc
    30841 acctggcgac gctaaccgaa accatcaaaa ccgaagaact gctgacctta ccggcaaacg
    30901 aagtgttgtg gcgtttgtat cacgaagaag aggtgacggt ttacgatccg caggatgtgg
    30961 agttcaaatg cacctgctcg cgtgaacgtt gcgccgatgc gctgaaaacg ctgcctgatg
    31021 aagaagttga tagcatcctg gcggaagatg gcgaaattga catgcattgt gattactgcg
    31081 gtaaccacta tctgttcaat gcgatggata ttgctgaaat ccgcaacaac gcgtctccgg
    31141 cagatccgca agttcattaa tgagtatgtc cggcagagag ggctctgccg gattttacga
    31201 cgtaatggcc tgatgtgctg cgcttaccag gcctgtgaaa taaatcgcaa attattgttg
    31261 gtcagataca gcgtcgtatc cgttaaaaga gttgtcactt acttaagttt atttccagcg
    31321 tttcaccatc taccgtcaga tcgcgccacg ctttcggcct cgtccccagt tttccatcct
    31381 tcgcagctgt gagtaatttt tctttcgtta tttcgttcgg aagtaaactc atatcaagcg
    31441 cgtcccattc ttttctgtct gagtcaaagc catagacaat gactctgtca tcattaaaag
    31501 caaacaggat ccgctccgcc tgaccatcac tattcagatc ttgctcgacc aggacgcagg
    31561 cgtctttttc aatacaggtc atcacgttat agcgatcctg gattaaggcc gaccagaatg
    31621 tcgcatccgg tttaacagaa ccaggggcaa ttaacacatt ttcggctaat actttttccg
    31681 atacctgttc ctgaagatgt tgctctccat ctaacgccat cagcagatcc cgcgcgcgtt
    31741 tcgggtcttt cataaacccg gcatcgcttt tcagcgactc aagcgccgca cgtccatagc
    31801 gaccgctctg ttcgagcatg tagatagtta cctggtctgg cgtgtttttg ccgctctgat
    31861 aacgcgccat atgactgttc acgctaatac gcatactgtc cagcaccggc gaattaagaa
    31921 gcaccagtat caccaacacc aataacgaaa ccgcaaggtt cactttgccc tgaagaacaa
    31981 ggggattttg cccattacgc cagacgatac tgacaaaata ccccagcgac cacaccagta
    32041 acaccagcac cgccagcgcg ccctgcaagc ggtcgacagt ccagccgtac tgagcgaccc
    32101 gcagccataa cgcccaggcg gcgacgaaca catacagcgg agcaaccagc aaagcggttt
    32161 taatcaggca acgcaacggc cccgtccagg gaagtgacgc tttttgcgga tcgcggacaa
    32221 tagccattaa gatcaattgc aaaaaggcca gcgttaacag caacccggcg gcggagatgt
    32281 ggcgagaaat cgcgctcagg cccgtaaacg gcagagtgat gataaacatc agggttagca
    32341 atgatactaa cggcagcaac cccgtggcga ttaacgtgaa caacttttga atagagtcga
    32401 ttaaacgtga ctgtgtgcgc gcgagaatca ccgccagtgc ggtaaccaga cctaatgtaa
    32461 gatacataaa ccagtcggtt gcaaaaaaga gcgtattgaa aaacttgatg ccaacaagtt
    32521 taaacaactc accccacagt aaaagcacca gccacgtcag gccattggcg agaaaaatca
    32581 ccagtaatat aagtacgtta tgccatactg acttgtaaaa gtagctatag cggctactgt
    32641 cattgcggat gcgaaggctt tgttgtatcc atggtagcaa caacattgcc atcagcagca
    32701 gatagcaacc aaaatcccaa agcgcctttt cagctctcca ggggttcatg ccatcagttt
    32761 gccacttcaa ccagccgctc atccccagcg tggcaataaa caccagcgcc agccatcccc
    32821 aaaggcgctt ctgtttaaaa gagatcacgg agaagagtaa aacggatgaa aacgcaacgg
    32881 tcgcaggcac gccataaaca atccaactgt gattttttcc ggcaagccag gcgatcaaca
    32941 ggtagcaaac cagcccctga agtaatccgg tagcaatcat cccccagcgt gttgccggtg
    33001 aaagttcaac gttatccatg ttggttatcc agaatcaaaa ggtgggttaa ttatcgcatc
    33061 cgggcagtag tattttgctt ttttcagaaa ataatcaaaa aaagttagcg tggtgaatcg
    33121 atactttacc gattgaattt gcatcaattt cattaaggaa tgcgattcca ctcacaatat
    33181 tcccgccata taaaccaaga tttaaccttt tgagaacatt ttccacacct aaaatgctaa
    33241 ttctgcgata atagcaaccg tttcgtgaca ggaatcacgg agttttttgt caaatatgaa
    33301 tttctccaga tacgtaaatc tatgagcctt gtcgcggtta acacccccaa aaagacttta
    33361 ctattcaggc aatacatatt ggctaaggag cagtgaaatg cgcgttaaca atggtttgac
    33421 cccgcaagaa ctcgaggctt atggtatcag tgacgtacat gatatcgttt acaacccaag
    33481 ctacgacctg ctgtatcagg aagagctcga tccgagcctg acaggttatg agcgcggggt
    33541 gttaactaat ctgggtgccg ttgccgtcga taccgggatc ttcaccggtc gttcaccaaa
    33601 agataagtat atcgtccgtg acgataccac tcgcgatact ttctggtggg cagacaaagg
    33661 caaaggtaag aacgacaaca aacctctctc tccggaaacc tggcagcatc tgaaaggcct
    33721 ggtgaccagg cagctttccg gcaaacgtct gttcgttgtc gacgctttct gtggcgcgaa
    33781 cccggatact cgtctttccg tccgtttcat caccgaagtg gcctggcagg cgcattttgt
    33841 caaaaacatg tttattcgcc cgagcgatga agagctggca ggtttcaaac cagactttat
    33901 cgttatgaac ggcgcgaagt gcactaaccc gcagtggaaa gaacagggtc tgaactccga
    33961 aaacttcgtg gcgtttaacc tgaccgagcg catgcagctg attggcggca cctggtacgg
    34021 cggcgaaatg aagaaaggga tgttctcgat gatgaactac ctgctgccgc tgaaaggtat
    34081 cgcttctatg cactgctccg ccaacgttgg tgagaaaggc gatgttgcgg tgttcttcgg
    34141 cctttccggc accggtaaaa ccaccctttc caccgacccg aaacgtcgcc tgattggcga
    34201 tgacgaacac ggctgggacg atgacggcgt gtttaacttc gaaggcggct gctacgcaaa
    34261 aactatcaag ctgtcgaaag aagcggaacc tgaaatctac aacgctatcc gtcgtgatgc
    34321 gttgctggaa aacgtcaccg tgcgtgaaga tggcactatc gactttgatg atggttcaaa
    34381 aaccgagaac acccgcgttt cttatccgat ctatcacatc gataacatcg ttaagccggt
    34441 ttccaaagcg ggtcacgcaa cgaaagttat cttcctgacc gcagacgcct ttggtgtgct
    34501 gccgccggtt tctcgtctga ctgccgatca aacccagtac cacttcctct ctggcttcac
    34561 cgccaaactg gccggtactg agcgtggcat caccgaaccg acaccaacct tctccgcttg
    34621 cttcggcgcg gcgttcctgt cgctgcatcc gactcagtac gcagaagtgc tggtaaaacg
    34681 tatgcaagcg gcaggtgcgc aggcgtatct ggttaacact ggctggaacg gcactggcaa
    34741 acgtatctcg attaaagata cccgcgctat tatcgacgcc atcctcaacg gttcgctgga
    34801 taacgcagaa actttcactc tgccgatgtt taacctggcg atcccaaccg aactgccggg
    34861 cgtagacacg aagatcctcg atccgcgtaa cacctacgct tccccggaac agtggcagga
    34921 aaaagccgaa accctggcga aactgtttat cgacaacttc gataaataca ctgacacccc
    34981 agcgggtgct gcgctggtag cggcaggtcc gaagctgtaa tcagctgata tctcattgac
    35041 cccttatcca aacggataag gggttttttt atatctgatt agctatcaat atgtacacgg
    35101 tacacttata ataatcaata gaccgcagga tgcattatgt tcacctttat tgaactacaa
    35161 ggatttagca aacgccgcca gttattgtta cctgatgatg agttccgggc ttttcaggaa
    35221 ctactcattc aagatcccac tgccggtgac attatcgcag gcacaggcag ttttagaaaa
    35281 attcgctgga accgttctgg aatggggaaa cggggtggca ttcggataat ttattacaac
    35341 gtaacacgca atggccgaat ttatctggcg ttgatttatc ctaaaaatga acaggatgat
    35401 ttaacagaag aacaaagaaa ggcattgaaa ctattgtcag agaagctgct ttaatgttga
    35461 agctccacaa attccaccat ggtcgaaatg ccaacggaga cattgaaaac agatgaaaga
    35521 tgaattattt gctgatcttc ttgccagcgc agaagaaatg gtacgcatcg aaaagggtga
    35581 agaaacgcct gaaccagagc acgtccatac ttttagcgag atcgatgtaa aagcgatccg
    35641 tgaagcaacg ggtttacgtc agcaagattt tgctgtcgcc gtaggggtaa gttatgacct
    35701 ggtcaaaagc tgggaaacca aacgccgtca gcctaccgga gcacctcgaa aattgctcct
    35761 gcttttgcaa gcgaatcctt tcattatcaa tcaattgaaa acaatctaaa aacgggagac
    35821 accttcgcct cccgttttat ttacccttct tttgtcgtgc cctgcgcccg cgttaccggc
    35881 actggcagcc aggcgcgaat ggaaagcccg ccccgctcgc tggtgccaag ctccagcatc
    35941 ccgttatggt tatccacgat acgctgcaca attgccagcc ctaatcccgt gccgctaatg
    36001 gtgcgcgcac tgtcgccgcg gacaaacggc tggaacaggt gcttacattg ttccggcgca
    36061 attcccggac cgtcatcttc cacctggaac caggcgcgat tcggctccgt cccgctgctg
    36121 actttgatcc agccattgcc gtaacgggcg gcattgacca ccatattcgc caccgcgcgt
    36181 ttgatcgaca gcgggtgcat tttcacttca atgctgccgg ggtaaagcgc ggtttcaatt
    36241 tcccgctcat agccactttc ggcagcaata acctcaccga gtactgcgtt gagatccgcc
    36301 atttccatcg gcatctcctg cccggtgcgc aggtaatcga taaactgctc aatgatggcg
    36361 ttgcactctt cgatatcttt attgatcgat tcggccaggt agccatcctg ttcgctcatc
    36421 atctcggtcg ccaggcgaat acgcgtcagc ggcgtgcgta agtcatgact tacccccgcc
    36481 atcagcagcg tgcggtcatc cgccagttgc ttaacaccag ccgccatatg gttaaaggcg
    36541 cgggtaaccg aacgcacctc cgaagcgcca tactcacgca gcggcggcgg aataatccct
    36601 ttaccgacct gcaaagcagc atgttcgaga tcgaccaacg gtcggttctg gatacgaata
    36661 aacagccacg ccccgcctat cgccaatagc ataatcgcca gcgtatagcg gaacagcgga
    36721 gagaaatcgc cctgatgaat ttcggtcagc ggcacgcgta cccagatatt gggcgacagc
    36781 caggttttca gccagacgac aggcgaactt ttgttgacct caacgcgcac ttccgtcggg
    36841 ccgcccagtt gctgtgccat ctgatggctt aagaattcat agtgttgtgc ccaacgcaga
    36901 cctgcttctt cggcagcttc gttggaatag agagagatcc ccagctcacg gtagatctcc
    36961 cgacggaaag cgggaggcac aaccaactgc gtgccgtcct ccagttgcag tttgtcggtc
    37021 atcaacatac gcacttcgta cgcgaggact ttattaaact gctggaggct cggcaaaatc
    37081 gcgaagttca gcaccaccag ataagtcgtc accaggctgg cgaacagcaa ggtgacgatg
    37141 agcaataacg tacgggcaaa tgaacttcgt ggcgagaagc gcaatcgcct catgctttag
    37201 agccgtccgg tacaaagacg tagcccagac cccaaacggt ctgaatgtaa cgcggatgcg
    37261 ctggatcttc ttccaccatg cggcgcagac gcgaaatctg cacgtcgatg gagcgttcca
    37321 ttgcggaata ttcacggcca cgggcaaggt tcatcagctt atcgcgggag agcggctcac
    37381 gcggatggct gaccagtgcc ttcagtaccg caaactcacc gctggtgagc ggcatcggct
    37441 cgtcttcgcg gaacatttcg cgcgtaccga ggttaagttt gaacttaccg aaagcaatta
    37501 ccgcctcttc ctgtgacggt gcgcctggta gctcgttcgc ctgacgacgc agcaccgcac
    37561 ggatacgggc cagcagttca cgcgggttaa acggttttgg aatgtagtcg tcagcgccaa
    37621 tctccaggcc tacgatacgg tccacttctt cccctttcgc cgtcaccata atgatcggca
    37681 tcgggttgct ctgactacga agacgtcggc aaatcgacaa gccatcttca ccaggtaaca
    37741 ttaaatccag taccataaga tggaaagatt cacgagtcag caggcgatcc atctgttctg
    37801 cattagcgac gcttcgaacc tggaagcctt gttcggtgag ataacgttcc agcagcgcac
    37861 gcaggcgcat gtcgtcatcg accaccagaa tcttgtagtt ctcttgcatt gtttgtactc
    37921 ccaaaggttc gcaacaattt gtaagcgtgt attcttaaaa aagctcacgt tcgtcaccag
    37981 ctaaatctgg tatgaatttc agcctaaatt gttacaaagc atattaaaca gcagcttaag
    38041 tatacaattt attcggcgaa acattattga ttctgttgat atgatcacgt tatacccaat
    38101 gtgcgcatta tcaaacagac aaagggaatc aacgagatga aaacgcccct ggttacccgg
    38161 gaagggtatg aaaaactcaa acaagagctt aattatctct ggcgtgaaga acgcccggag
    38221 gtcacaaaaa aggtgacctg ggccgcaagt ctgggcgacc gcagcgaaaa tgctgactat
    38281 cagtataata aaaagcgtct gcgtgaaatc gaccgtcgcg tgcgctatct cactaaatgc
    38341 ctggaaaatc tcaaaatcgt cgattactcc cctcagcagg aaggcaaagt cttttttggc
    38401 gcgtgggtgg agattgaaaa cgacgatggc gtgactcacc gtttccgtat tgtcggctac
    38461 gatgaaattt ttggccgtaa agattacatc tctatcgatt ccccgatggc ccgcgcattg
    38521 ctgaaaaaag aagtcggcga tctggcggtg gtgaataccc ctgccgggga agcgagctgg
    38581 tatgttaatg ctatcgagta cgtgaaaccg taaggaagag tcttaacctc ctgccgatgg
    38641 ctggcatttt tgccagccag tccgtataac tatcccctga tttttgatcc gaaaagatga
    38701 actcaaacca tgatgaatga ttcgttctgc cgcattattg cgggtgaaat tcaggcgcgc
    38761 ccggaacagg ttgacgctgc cgttcgcctg cttgacgaag ggaataccgt gccgtttatc
    38821 gcacgttatc gtaaggaaat caccggcggt ctggatgaca cgcagctgcg taatctggaa
    38881 acgcgtctga gctatctgcg cgagctggaa gagagacgtc aggcgatcct caaatccatt
    38941 tccgagcaag gcaaactcac cgatgatctg gcgaaggcca tcaacgccac actaagcaaa
    39001 accgaactcg aagatctcta cctgccctac aaacctaaac gccgcacccg cgggcaaatc
    39061 gccattgaag cagggcttga gccgttggct gacctgctgt ggagcgatcc gtcacacacg
    39121 ccagaagtcg ccgctgcaca atatgttgat gcagataaag gcgtggcaga taccaaagcc
    39181 gcgctggacg gcgcgcgcta tatcctgatg gaacggtttg ccgaagatgc cgcgctgctg
    39241 gcgaaagtgc gtgattatct gtggaagaac gcgcatttgg tttctacggt ggtgagcggt
    39301 aaagaagagg aaggggcgaa attccgcgac tatttcgatc atcacgaacc gttgtccacg
    39361 gtgccttctc accgcgcgct ggcgatgttc cgtgggcgta acgaaggcgt actccagctt
    39421 tcgctgaatg ccgatccgca gttcgatgag ccgcccaaag agagctattg cgagcaaatc
    39481 atcatggatc accttggcct gcgcctgaac aatgccccgg cggatagctg gcgcaaaggc
    39541 gtggtgagct ggacgtggcg catcaaggtg ctgatgcatc tggaaaccga actgatgggc
    39601 accgtgcgcg aacgtgcgga agatgaagca atcaacgtct tcgcccgtaa cctgcacgat
    39661 ctgctgatgg cggcccctgc cggactgcgt gcaacgatgg gcctcgatcc gggtctgcgt
    39721 accggggtaa aagtagcggt agtcgatgca actggcaaac tggtggcgac cgacaccatt
    39781 tacccgcaca ccggacaggc cgcaaaagca gcgatgaccg ttgctgcgct gtgtgaaaaa
    39841 cataacgttg aactggtagc gatcggtaac ggtacagctt cccgcgaaac tgagcgtttc
    39901 tatctcgatg tgcagaagca gttcccgaaa gtgaccgcgc agaaagtaat cgtcagcgaa
    39961 gcaggcgcgt cggtttactc ggcttccgag ctggctgcac aggagttccc ggatctcgac
    40021 gtttcgctgc gtggcgcggt gtctatcgcc cgccgtttgc aggatccgct ggcggagctg
    40081 gtgaaaatcg atccgaaatc tatcggcgta ggtcagtatc agcatgacgt cagccagacg
    40141 caactggccc gcaaactgga cgcagtagta gaagactgcg taaacgccgt tggcgtcgat
    40201 ctcaacactg cttctgttcc gctgttaacc cgcgtggcgg gcctgacgcg catgatggcg
    40261 caaaacatcg ttgcctggcg cgatgagaac ggtcagttcc agaaccgtca gcaactgtta
    40321 aaagtgagcc gtctggggcc gaaagccttc gagcagtgcg cgggcttctt gcgcattaac
    40381 cacggtgata acccgctgga cgcgtctacc gttcacccgg aagcctatcc ggtggtggaa
    40441 cgcattctgg cagcaacaca gcaggcactg aaagatctga tgggtaacag cagcgaactg
    40501 cgtaacctga aagcgtctga ctttactgat gagaaattcg gtgtgccgac ggtaaccgac
    40561 atcatcaaag agctggaaaa accgggtcgc gatccgcgtc cggaatttaa aaccgctcag
    40621 tttgccgatg gcgtcgagac aatgaacgac ctgcaaccgg gtatgatcct cgaaggcgca
    40681 gtgaccaacg tcaccaactt tggcgcgttt gtcgatattg gcgtgcatca ggacggcctg
    40741 gttcacatct cttcattgtc gaacaagttt gtggaagatc cgcataccgt ggtgaaagcg
    40801 ggcgacattg tgaaggtgaa agtgctggaa gtggatcttc agcgtaaacg tatcgccctg
    40861 actatgcgcc tggatgagca gcctggcgaa accaacgctc gtcgcggcgg cggtaatgaa
    40921 cgcccgcaaa acaaccgccc ggcagccaaa ccacgcggtc gtgaagcgca gcctgccggt
    40981 aatagcgcga tgatggatgc gctggcggcg gcaatgggca aaaaacgtta aacgcccgta
    41041 ctggcctacg gttcgaattt gcacgaaatc gtagggcaga taaggcgttc acgccgcatc
    41101 tggcaacgaa cgccttgcct gacataaaag tgccggagaa tatctccggc atttttattc
    41161 cacagccaaa ctcataatat attccggcaa tacttatcat ttcattaaca actgaaacct
    41221 taattaaaca ttagccagtc cgggtaattc actattcgaa ttatattttc gctgcgatat
    41281 aaccttgagc cacatcaaca ttgagtcaga ttattattca aaccaacatt cgcacacatt
    41341 ttaagtattg ctgatagaaa ccattctcat tatcattgtg ttgttgatta tttaatctct
    41401 cctttgttgg caaatcatct ggtctcatgt cgctgtcaaa cgccccatga ggtagttatc
    41461 cagttaatga gaaacaagta ggcacctatg caatacactc cagatactgc gtggaaaatc
    41521 actggctttt cccgtgaaat cagcccggca tatcgccaaa aactgctttc tcttggcatg
    41581 ttacctggct cctcttttaa tgtggtgcgc gtcgctccac tcggcgaccc cattcatatc
    41641 gaaacccgtc gtgtgagcct ggtattacgt aaaaaagatc tggccttatt agaagtggaa
    41701 gcggtttcct gttaatacgg tgataacaac aatgaaaaaa ttaaccattg gcttaattgg
    41761 taatccaaat tctggcaaga caacgttatt taaccagctc actggctcac gtcagcgtgt
    41821 aggtaactgg gctggcgtta ccgtcgaacg taaagaaggg caattctcca ccaccgatca
    41881 tcaggtcacg ctggtggacc tgcccggcac ctattctctg accaccatct catcgcagac
    41941 ctcgctcgat gagcaaatcg cctgtcacta cattttgagt ggcgacgccg acctgctgat
    42001 taacgtggtg gatgcgtcta accttgagcg taacctgtac ctgacgctac aactgctgga
    42061 actcggcatt ccctgcattg tggcactgaa catgctcgac attgccgaga agcaaaatat
    42121 tcgtattgaa attgatgctc tgtcggcgcg tctgggctgt ccggtgatcc cgctggtttc
    42181 aacccgtggt cgcggtattg aagcgctcaa gctggcgatt gatcgctata aagctaacga
    42241 gaatgtggaa ctggtacatt acgcacagcc gctactcaac gaagcagatt cactggcaaa
    42301 agtgatgcct tccgacatcc cgctgaaaca acgtcgctgg ctgggcctgc aaatgctgga
    42361 aggcgatatc tacagccgcg cctacgccgg tgaagcgtcg cagcatcttg atgccgccct
    42421 cgcccgtctg cgtaatgaga tggacgatcc ggcgctgcac attgccgatg cgcgttacca
    42481 gtgcattgct gccatctgtg atgtggtaag caacaccctg acggcagaac ccagccgttt
    42541 caccactgcg gtagataaaa tcgtgctcaa ccgtttcctc ggtctgccga ttttcctctt
    42601 tgtgatgtac ctgatgttcc tgctggctat caacatcggc ggggcgttac agccgctgtt
    42661 tgacgtcggc tccgtggcgc tatttgtgca tggtattcaa tggattggct acacgctcca
    42721 cttcccggac tggctgacta tcttcctcgc ccagggcctg ggtggcggca ttaacaccgt
    42781 gctgccactg gtgccgcaga ttggcatgat gtacctgttc ctctccttcc ttgaggactc
    42841 cggctatatg gcgcgtgcgg cgtttgtgat ggaccgtctg atgcaggcgc tgggcttgcc
    42901 ggggaaatcc tttgtgccgc tgatcgtcgg tttcggttgt aacgtaccgt cggtaatggg
    42961 tgcacgtacg cttgatgcac cgcgtgaacg tctgatgacc atcatgatgg caccgtttat
    43021 gtcctgcggc gcgcgtctgg ctatcttcgc agtattcgcg gctgccttct tcgggcagaa
    43081 cggtgcgctg gcggtcttct cgctgtatat gctgggtatt gtgatggcgg tgctgactgg
    43141 cctgatgctc aagtacacca tcatgcgcgg tgaagcgacg ccgtttgtca tggagttgcc
    43201 ggtctatcat gtaccacacg ttaaaagcct gattatccag acctggcagc gtctgaaagg
    43261 cttcgttctg cgtgctggta aagtgatcat catcgtcagc attttcctga gcgctttcaa
    43321 cagcttctcg ctgagcggga aaatcgtcga taacatcaac gactcggcgc tggcgtccgt
    43381 cagccgggtg atcaccccgg tcttcaagcc aattggcgtg catgaagata actggcaggc
    43441 aacggttggc ctgtttacag gtgccatggc gaaagaagtg gtagtgggta cgctcaacac
    43501 cctctacacc gcagaaaata ttcaggacga agagttcaat ccggcagaat ttaacctcgg
    43561 tgaagagctg ttcagtgcga tagatgaaac ctggcagagc ctgaaagaca ccttcagcct
    43621 tagcgtactg atgaacccca ttgaagccag caaaggcgac ggcgaaatgg gtaccggggc
    43681 gatgggcgtg atggatcaga aattcggtag cgcagcagca gcttacagct acctgatttt
    43741 cgtcctgctg tatgtaccat gtatctcggt gatgggagcc atcgcccgtg aatcaagccg
    43801 tggctggatg ggcttctcca tcctgtgggg gctgaatatc gcttactcgc tggcaacatt
    43861 gttctatcag gtcgccagct acagtcagca cccaacttac agcctggtgt gcattctggc
    43921 ggttatcctg tttaacatcg tggttatcgg tctgctgcgc cgcgcgcgta gccgggtgga
    43981 tatcgaactg ctggcaaccc gcaagtcggt aagcagttgc tgcgcagcca gcaccaccgg
    44041 tgattgccat taatggcttc acttattcag gtgcgcgatt tgctggcgtt acggggccgt
    44101 atggaagcgg cccagataag ccagacattg aacactccac agccaatgat taacgccatg
    44161 ctgcaacaac tggaaagtat gggcaaagcc gtgcggattc aggaagagcc tgacggctgc
    44221 ctctctggca gttgtaaaag ctgcccggaa ggaaaagcct gtttgcgcga gtggtgggcg
    44281 ctgcgttaac cttactccat cgcctgtttt ggaaagcccg gtatgcgtct gcatccgggc
    44341 ttttttgcgt gcggctttcc ataaaaatgc aactcttgca gcacggcgta agttcctttg
    44401 aaagcatctc gcagggatga aaactcgcta atgcacagat gtggagtggc gcgtagagtc
    44461 gcggcattca aacaacaggt gaaggaacgc catgagtaaa aagcagagtt ccaccccaca
    44521 tgatgcgctg ttcaaactct ttttacgcca accggacacg gctcgcgatt ttcttgcgtt
    44581 ccatttaccg gcccccattc acgcgctctg tgatatgaaa accctcaagc tggagtcgag
    44641 cagctttatt gatgacgatc tgcgtgaaag ctattccgat gtgctgtggt cggtgaaaac
    44701 ggaacaagga ccaggataca tctattgtct gattgaacat caaagcacct caaacaaact
    44761 gatcgcattt cgtatgatgc gttacgctat tgccgcaatg caaaatcacc ttgatgctgg
    44821 atacaaaacg ttgccgatgg tggtgctatt gttgttttac cacggtattg aaagccccta
    44881 tccctattcg ctgtgttggc tggattgttt cgccgatccc aaactggcaa ggcagcttta
    44941 tgcctccgca tttccgctga ttgatgtcac cgtcatgcct gatgatgaaa tcatgcagca
    45001 ccgacgtatg gcgctgctgg agttaattca aaaacatatt cgtcaacgcg acctgatggg
    45061 gctggtagag caaatggcct gcttattaag tagtggatac gctaatgaca gacaaatcaa
    45121 agggctgttt aattacatac tgcaaaccgg cgacgcggta cgttttaacg attttatcga
    45181 cggcgttgcc gaacgttcac cgaaacacaa ggagagttta atgacaattg cggaaagatt
    45241 gcggcaggag ggggaacaat ccaaagccct gcatatagcc aaaataatgc ttgaatccgg
    45301 agtccctctt acagacatca tgcgctttac cggggtgtca gaagaagagt tggctgcggc
    45361 gagccagtaa atttctgtct cgccatttca aaagttgcct acaccctctg cttcaacgcc
    45421 accagcaggt gacaaaactc gaccggatgc gaaataaacg gcgcatgggc cgctttggcg
    45481 aagatatatg attcgctgtg aggccaaagt ttatccagca tcggcaccac tttgcgcggc
    45541 accagaccgt cgagatagcc atacaatcgc aaaaacggca tggacacgtt ttgcagcggc
    45601 tgacggagat cgaccgtttt caggatttcc agcccgccat taagcacgtc aacctccggc
    45661 atcggtaacg ccagaacggt tttcttcaac gcccgcgcat cctggcgcgc cgtttcagtc
    45721 cccatggttt gtaacgccag gaaccgctcc actgtacgct gaaaatcatc actgagttgc
    45781 tgctgaaatc ccgccagcac gtccggtttt atccccggcc actcgtcacg agcactaaaa
    45841 caaggtgacg acgccacggt gaccagcgcc tgaacacgct cgggatgggt taacgcaatc
    45901 tggcttgcca ccagcccgcc cagactccag cctaaccaaa tggctttatc aggtgcctgt
    45961 tgcagcacgg cttcggccat atcagcaagt gacagcgcac caaatccccg gctacgcccg
    46021 aagccgggca ggtcaacaag gtgcagcgta aaatgcgagc taagttcctc gtcaatgcaa
    46081 cgccacactt cggcattcag tccccatccg tgcagcagca caagatgaac attcccctga
    46141 cctttggtct gccaccagat gttattcatc cgctattgtt ctcttttgac ttacaaggat
    46201 gaacatatgc taacagtacc gggattatgc tggctatgcc gaatgccact ggcgttaggt
    46261 cattggggga tttgttcggt ctgttcacgc gccacccgca cagataaaac gttatgccca
    46321 caatgtggat tacccgccac acactcccat cttccctgcg gtcgctgcct gcaaaaaccg
    46381 ccgccctggc aaagactggt cacagttgcc gactatgcgc cgccgttaag tctgctcatc
    46441 caccagctta aattttcccg gcgcagtgaa atcgccagcg ccctgtcacg tctgttacta
    46501 ttggaagtct tgcacgctcg tcgcaccacc gggttgcaat tgccggatcg catcatcagc
    46561 gttccgttat ggcagcggcg tcactggcgt cggggattta atcagagcga tttgctgtgt
    46621 cagccgttat cacgctggtt gcactgccaa tgggatagcg aagccgtcac acgtacacgg
    46681 gccactgcga cccagcattt tctcagtgcc cggctgcgca agcgcaacct gaaaaatgcc
    46741 tttcgtcttg aattgcccgt gcaaggtcgc catatggtga ttgtggatga tgtcgttacc
    46801 accggaagta ccgtcgcaga gattgcgcag ttgcttttac gcaatggtgc ggcgactgtc
    46861 caggtctggt gcctttgtcg aaccttgtag agcctcgatg atgggcgtat tataaccaac
    46921 taaaatagtc aactattagg ccattactat gatccgtatt tccgatgctg cacaagcgca
    46981 ctttgccaaa ctgctggcaa atcaggaaga agggacacaa atccgcgtat ttgtgattaa
    47041 ccctggcacg cctaacgctg aatgtggtgt ttcttattgt ccgccggatg ccgtggaagc
    47101 caccgacact gccctgaaat ttgacctgct gaccgcgtat gttgatgagt taagcgcacc
    47161 atacctggaa gatgcagaga tcgactttgt taccgaccag ttgggttctc agttaacgct
    47221 gaaagccccg aacgccaaaa tgcgtaaagt ggcagacgat gcaccgctga tggagcgcgt
    47281 ggagtatatg ctgcagtcgc agatcaaccc acagcttgct ggtcacggtg gtcgcgtttc
    47341 gctgatggaa atcaccgaag acggttacgc cattctgcaa tttggcggcg gctgtaacgg
    47401 ttgttccatg gtcgatgtga cgctgaaaga agggatcgag aagcagctgc taaacgaatt
    47461 cccggagctg aaaggtgtgc gcgatctcac cgaacaccag cgcggcgaac actcctacta
    47521 ctaagttatc ccctcttttg tagattgccc gatgcgacgc taaagcgtca tttcgggcct
    47581 acgttgaaca tgtgccagac gttggcacag cattgctttg gcaaatccct cccttcgttt
    47641 ccccgcgata atatgaccaa cctctcataa tttaaattta ccccgctctg gtgattctca
    47701 aacgccagat gttacccgta tcattcacat gggtaccaaa catactcctg acatctgact
    47761 acaataatta gttttagtgg gtatcagtcg tggtgccgca atatctctgc tcccgattgg
    47821 gataattaga gtttgtcgtc agaaaattga cgttacccat aacaaatgaa aggccaggta
    47881 aatcatgcca ttagtcattg ttgctatcgg tgtaatcttg ttgttgctcc tgatgatccg
    47941 cttcaaaatg aacggcttca tcgctctcgt cctcgtggcg cttgctgttg gattaatgca
    48001 aggaatgccg ctggataaag ttattggctc catcaaagcc ggtgtcggcg ggacgctcgg
    48061 tagccttgcc ctgatcatgg gttttggcgc aatgctgggc aaaatgctgg cagactgcgg
    48121 tggcgcacaa cgtatcgcca ccacgctgat tgccaaattt ggtaaaaaac acatccagtg
    48181 ggcggtggta ctgaccggtt ttaccgttgg ttttgccctg ttctatgaag tgggctttgt
    48241 gctgatgctg ccgctggtgt ttaccatcgc ggcttctgcg aatattccac tgttgtatgt
    48301 tggtgtacca atggcagctg cactgtctgt gacccacggc ttcctgccac cgcatccggg
    48361 tccgactgcg attgccacca ttttcaatgc cgatatgggt aaaaccctgc tgtacggtac
    48421 tattctggca atcccgaccg tgattctcgc cggtccggtt tacgctcgcg tgttgaaagg
    48481 tatcgataag ccaattccgg aaggtctcta cagcgcgaaa accttcagcg aagaagagat
    48541 gccgagcttt ggcgtcagcg tctggacctc tctggtgccg gtagtactga tggcgatgcg
    48601 tgcgattgcc gaaatgatcc tgccgaaagg tcacgctttc ctgccggtag cggagttcct
    48661 cggtgacccg gtaatggcta cgctgattgc cgtgctgatt gccatgttca cctttggtct
    48721 gaaccgtggt cgttcaatgg atcagattaa cgacacgctg gtttcttcca tcaaaatcat
    48781 tgcgatgatg ctgttgatca tcggtggtgg cggtgcgttc aagcaggtgc tggtagacag
    48841 cggcgtggac aaatacattg cttccatgat gcacgaaacc aacatttctc cgctgctgat
    48901 ggcctggtcg attgctgccg tactgcgtat cgcgctgggt tccgcaaccg ttgcggcaat
    48961 cactgcgggt ggtatcgcgg caccgctgat tgcaacgacg ggtgttagcc cggagctgat
    49021 ggttattgcg gtgggttccg gtagtgtgat tttctctcat gtgaacgatc cgggcttctg
    49081 gctgttcaaa gagtacttta acctgactat cggcgagacc atcaaatcct ggtcgatgct
    49141 ggaaaccatt atctcggtgt gcggtctggt aggctgtctg ctgctgaata tggtgatttg
    49201 ataacactga ctgccggatg catcgcatcc ggcatcaacc gcactctact tcttcttcgc
    49261 tgcagctctg cgccgtctgt ccaaatcctt cagcaacttg ttcacgccat catcggcaaa
    49321 catcgactca agcgttgcgg aaagcttgcg tcgccagttt ttatactggt aactggtgcc
    49381 aggaatattc accggttcgg ccatatccag ccagtcttcc ggctgtagtc ctaacagagc
    49441 actgttactg tcggcaatgt agcgctgcaa accacggttc agcgtcggcg tcatcgacat
    49501 caacgatgcc ttatgcccgg cacgttttgg cagacaacca tatttatgca gtgcatccag
    49561 cagcccttgc ttcgccagtt cgcgatcctg atacagaccg cgcagtacca cttcatccgg
    49621 atacagcccc agggttttgc ccaacgttag atccccgctc tcccagtaac cgcgcagcgt
    49681 aggcaggtca tgtgtcgccg caaccgccat cgactgctcc ggatacgctt tcggtgcacg
    49741 gaacgtcttc tcgtggtcgt tttcgaaata gagcactttg taggagtaca caccgctgct
    49801 gcgcagctta ccgacaatct ctaccggtac ggtaccgaga tcttcaccaa tcaccataca
    49861 gcgatgacgt ttactttcga gtgccagaat cgagagcaga tcatccaccg gatagtgaac
    49921 atacgcgccc tgatctgccg tctcgccata cggtatccac cacaaacgca gcatcgacat
    49981 cacatggtca attcgtaatg cgccgcagtt ttgcatattg gcacgcaaca gctcgataaa
    50041 cggttcatag gcacgcgcgg tgatgatatg cgggtccatt ggcggtaatc cccagttctg
    50101 ccccaacggg ccgaggatat ccggcggcgc gccaaccgac gctttcaggc aatatagttc
    50161 acgatcacac caggtttccg ccccaccttc cgctacgcca accgccagat cacgatacaa
    50221 gccaatcggc atttcatagc cctggcttat ctcccagcag gcggcaaact ggctgtaagc
    50281 cagccactgc aaccagagat aaaaatcgac gtcatcacga tgttcttcgc agaactgacg
    50341 cacttctggt gaatccacgt tctgatacat ctctggccat gcaggccagc cccagcgcat
    50401 ttcgtcctct ttcacttgct gggcatgtag cgcatcaaag gctgcctgcc agaacaggct
    50461 gtcgccctgc tctgcaacaa actggcgaaa cgcggtcatc tgctcatcat cacgttgcgc
    50521 gaaacctttc cacgccattc gtaatgctgt catttttagg gcggtaaccg tggagtaatc
    50581 gacccagtcg gcatcgcgcg cctgttgcag cgtctgttgc gtggtcggca actgccacca
    50641 ggcctgagcc tcttcgctaa gatggaaatc ttcaacggcg ttaacgtcga tataaatcac
    50701 attcagccaa cggcgagaag acgggctgta tgggctggca ctctccggat ttgccggata
    50761 gagcgcatga atcgggttca ggccgatgaa cgacccgcca cgttttgcca catccaccag
    50821 catcgctttg agatcgccaa aatccccaat accccagttt ttttccgatc gcagcgtata
    50881 aagctgaacg caggcacccc acagcttttg tttattcagc aacgcctgcg gttcgtaaca
    50941 gcgtttcggg gcgacaatca cccggcaatg cgcgcgctgg tcgtcctggg tgagtgtcag
    51001 cgtgtgataa ccttccggca gcttcgtcgg tagattgaac gctttgcccc ccgttacatg
    51061 gcctttgtac tgtgttcctt cttcggtggt cagcagccag ctatattcgc cgctgccctc
    51121 caccaccatc ggcatttttt tgccgctggt ataaaccatg acattcggga ctggcgttac
    51181 cgccactttc gtggcggtac gttgatgcat cgcgtcaagc aaacgccgtt tggtttcggc
    51241 gctaatcgac tgcggtttac cgtgggcatt gatgtaattg gggctaatcc ccgccgccag
    51301 cgcggcatta tccagacgtt tgctttccat cgagcttcct tagcgttttg cctgccagat
    51361 acgagcctga taatcgcgaa tagagcgatc cgagctaaac ataccgcagc gggcggtatt
    51421 gaggatcgcc gcgcgagtcc aggcctcctg gtcgcggtac agcacatcca cttgcttttg
    51481 tgcctcaaca taggctgcga aatccgccat caccagatac ggatcgccgc cttgtttgcc
    51541 gatactgtgc agcatctggt cgaaggcatg cttatcgccg tcgctgtatt taccgctttc
    51601 cagctctttc aatactgcgt ccagcacctt atctttcttc cgccatttca ccgggtcgta
    51661 gcctttggcc agaattgcct tcacttgttc cacggtatga ccaaaaataa agatattttc
    51721 ttcaccgact ttctcggcga tttcaacgtt cgcaccatcc agcgtaccga cagtaagcgc
    51781 accattgagc gccagtttca tattgccggt accggaagct tctttacctg cagtcgaaat
    51841 ttgttcggag atatccgccg ccgggatcag tttttccgcc gccgaaacgc aataatccgg
    51901 caggaacacc accttcaact tatcgccaac cagtggatcg ttgttgatca cgtcagccac
    51961 tttgttgatc gcaaagataa tattcttcgc caggtagtag cccggtgccg ctttcgcgcc
    52021 gaagaggaag acgcgcggta cgcgatcagc ctgcgggttt tcacgaattt ctttgtacaa
    52081 cgccagaata tgcagcagat tcaggtgctg gcgtttgtac tcatgcagac gtttgatctg
    52141 aatatcgaaa atcgcctgtg gattgatctc aataccagta cgaactttca caaactccgc
    52201 cagacggact ttattcgcct gcttgatctc gcgatattgc tgacggaatt tcgcatcatc
    52261 agcgaatttt tccagattga tcagctgatc gagatcgtta gcccactctt tttgcagtga
    52321 tttatccaac agagccgcca gtgcagggtt gcactgtttg atccagcgac gtggggtaat
    52381 accgttggtg acgttatgga atttgttcgg ccatagctgg tgatattccg ggaacagatc
    52441 tttcaccacc agatccgagt gcagcgccgc aacaccgttc accgcgaaac cgccaaccac
    52501 acacaggttc gccatatgca cttgtttatc gtgcaccacc gccagtttgg cccacacttt
    52561 ttcatcgccc ggccaggttt tctccaccag cgttttaaag cgagtattaa tttcgttaat
    52621 aatctgcata tggcgcggca gtaagccttt caccagtttc acatcccagc gttccagcgc
    52681 ttctggcatc agggtatggt tggtgtaagc gaaagttttg ctggtaatgg cccaggcgtc
    52741 atcccagctc atctggtgct catcgatcag cacgcgcagc agttctggaa tcgcgatagt
    52801 tgggtgggta tcgttcagct gaataacttc gtaatccgcc agttcgtgca gtttacgccc
    52861 cgccagatga tggcgacgca aaatatccgc taccgaacag gcacactgga agtactgctg
    52921 catcaagcgc agctttttac cggcagtatg gttgtcgttt ggatagagaa ctttggtcag
    52981 tttttccgca ttgatgccct gctgttcggc acgcaggaaa tcaccgtcgt taaatttagt
    53041 cagatcaaac ggatgcgcgt gcgtcgcctg ccacagacgc agcggctgcg ccacgccatt
    53101 acgatagccg acaacgggga gatcccacgc ttgaccggta atggtaaact ccggctccca
    53161 gcgtccgtct ttcgtcactt taccgccaat ccctacctgc acatccagtg cttcgttgtg
    53221 gcggaaccac gggtagttac tgcgatgcca gtcatccggc gcttcaacct gtttgccatc
    53281 gacaaaagac tggcggaaca aaccatattg atagttcaga ccgtaacccg tcgcagactg
    53341 accgacagtt gccattgagt cgaggaagca cgccgccaga cgtcccagac caccgttacc
    53401 cagcgccggg tcgatctctt cttccagcag gtccgtcaga ttgatgtcat aagccttcaa
    53461 cgaatcctgt acatcctgat accagccgag attcaacagg ttgttgcccg tcaggcgacc
    53521 aatcaaaaac tccattgaga tgtagttaac atgtcgctga ttcgccaccg gcttggcgaa
    53581 tggctgagca cgcagcattt cggccagtgc ttcactcact gctagccacc actggcgagg
    53641 agtcatttca gccgcagaat ttaagccata acgctgccac tgacgtgaaa gcgcttcctg
    53701 aaattgctta tcgttaaaaa taggttgtga cataggagtt ccacttttct tagattttca
    53761 acacaacgtt atcgctagtt tgccaggctc gatgttgacc ttcctcatcc tgcgggggat
    53821 taggcaggga ggagttgcgg ggatgagcaa ggaaatgtga tctcaaccac ttaaagctag
    53881 tgcaaaccac aggattagca gcaaatcaat gcaatacagc gcagaaaatc tgtatctaag
    53941 tgcaaaaaat ggccgttgcg tattttcaaa aagcggaagg taactctata aattaagtaa
    54001 aggagtgaaa cagtttcata agtaaaatat ccagtgtgct ccatctcatt cttaatagat
    54061 ttattaagat catcttttta gatggcactt tcatcaggaa tgaagaagaa acccttgctt
    54121 aaatgaatct gatgaacata agggaaacca gtattcacgc tggatcagcg tcgttttagg
    54181 tgagttgtta ataaagattt ggaattgtga cacagtgcaa attcagacac ataaaaaaac
    54241 gtcatcgctt gcattagaaa ggtttctggc tgaccttata accattaatt acgaagcgca
    54301 aaaaaaataa tatttcctca ttttccacag tgaagtgatt aactatgctg attccgtcaa
    54361 aactaagtcg tccggttcga ctcgaccata ccgtggttcg tgagcgcctg ctggctaaac
    54421 tttccggcgc gaacaacttc cggctggcgc tgatcacgag tcctgcgggc tacggaaaga
    54481 ccaccctcat ttcccagtgg gcggcaggca aaaacgatat cggctggtac tcgctggatg
    54541 aaggtgataa ccagcaagag cgtttcgcca gctatctcat tgccgccgtg cagcaggcaa
    54601 ccaacggtca ctgtgcgata tgtgagacga tggcgcaaaa acggcaatat gccagcctga
    54661 cgtcactctt cgcccagctt ttcattgagc tggcggaatg gcatagccca ctttatctgg
    54721 tcatcgatga ctatcatctg atcactaatc cagtgatcca cgagtcaatg cgcttcttta
    54781 ttcgccatca accagaaaat ctcaccctag tggtgttgtc acgcaacctt ccgcaactgg
    54841 gcattgccaa tctgcgtgtt cgtgatcaac tgctggaaat tggcagtcag caactggcat
    54901 ttacccatca ggaagcgaag cagttttttg attgccgtct gtcatcgccg attgaagctg
    54961 cagaaagcag tcggatttgc gatgacgttt ccggttgggc gacggcacta cagctaatcg
    55021 ccctctccgc ccggcagaat acccactcag cccataagtc ggcacgccgc ctggcgggaa
    55081 tcaatgccag ccatctttcg gattatctgg tcgatgaggt tttggataac gtcgatctcg
    55141 caacgcgcca ttttctgttg aaaagcgcca ttttgcgctc aatgaacgat gccctcatca
    55201 cccgtgtgac cggcgaagaa aacgggcaaa tgcgtctcga agagattgag cgtcaggggc
    55261 tgtttttaca gcggatggat gataccggcg agtggttctg ctatcacccg ctgtttggca
    55321 acttcctgcg ccagcgctgc cagtgggaac tggcggcgga gctgccggaa atccaccgtg
    55381 ccgccgcaga aagctggatg gcccagggat ttcccagcga agcgattcat catgcgctgg
    55441 cggcaggcga tgcgctgatg ctgcgcgata ttctgcttaa tcacgcctgg agtttgttca
    55501 accatagcga actgtcgctg ctggaagagt cgcttaaggc cctgccgtgg gacagtttgc
    55561 tggaaaatcc gcagttagtg ttattgcagg cgtggctaat gcaaagccaa catcgctatg
    55621 gcgaagttaa caccctgcta gcccgtgctg aacatgaaat caaggacatc agagaaggca
    55681 ccatgcacgc agaatttaac gctctgcgcg cccaggtggc gattaacgat ggtaatccgg
    55741 atgaagcgga acggctggca aaactggcac tggaagagct gccgccgggc tggttctata
    55801 gccgcattgt ggcaacctcg gtgctgggtg aagtgctgca ctgcaaaggc gaattgaccc
    55861 gctcactggc gctaatgcag caaaccgaac agatggcacg ccagcacgac gtctggcact
    55921 acgccttatg gagtttaatc cagcaaagtg aaattctgtt tgcccaaggg ttcctgcaaa
    55981 ccgcgtggga aacacaggaa aaagcgttcc agctgatcaa cgagcagcat ctggaacagc
    56041 tgccgatgca tgagtttctg gtgcgcatcc gagcacaact gttatgggcc tgggcacggc
    56101 tggatgaagc cgaagcgtcg gcgcgtagcg ggattgaagt cttgtcgtct tatcagccac
    56161 agcaacagct tcagtgcctg gcaatgttga ttcaatgctc gctggcccgt ggtgatttag
    56221 ataacgcccg tagccagctg aaccgtctgg aaaacctgct ggggaatggc aaatatcaca
    56281 gcgactggat ctctaacgcc aacaaagtcc gggtgattta ctggcaaatg accggcgata
    56341 aagccgccgc tgccaactgg ttgcgtcata cggctaaacc ggagtttgcg aacaaccact
    56401 tcctgcaagg tcaatggcgc aacattgccc gcgcacaaat cttgctgggc gagtttgaac
    56461 ctgcggaaat tgttctcgaa gaactcaatg aaaatgcccg cagtctgcgg ttgatgagcg
    56521 atctcaaccg taacctgttg ctgcttaatc aactgtactg gcaggccgga cgtaaaagtg
    56581 acgcccagcg cgtgttgctg gacgcattaa aactggcgaa tcgcaccgga tttatcagcc
    56641 attttgtcat cgaaggcgaa gcgatggcgc aacaactgcg ccagctgatt caactcaata
    56701 cgctgccgga actggaacag catcgcgcac agcgtattct gcgagaaatc aatcaacatc
    56761 atcggcataa attcgcccat ttcgatgaga atttcgttga acgtctgcta aatcatccgg
    56821 aagtgccaga actgatccgc accagcccgt tgacccaacg tgaatggcag gtcctggggc
    56881 tgatttactc cggttacagc aatgaacaaa ttgcgggcga actggaagtg gcggcaacca
    56941 ccatcaagac gcatatccgc aatctgtacc aaaaactcgg cgtcgcccac cgtcaggctg
    57001 ccgtgcagca cgcgcagaaa ctgctgaaga tgatgggtta tggggtgtga gtttagccgg
    57061 ataatgcatt ggatccggtt tacatcttta catcattcaa tactcacccg cgttacgcca
    57121 tctgtttcta tcaaaccaaa ccgcaccggc aagaaacgct ccaccaccgc gatattggtc
    57181 agcagatggc atgaaggatg ggcgacctta aattctcccg cgcccgccag cgccatcggc
    57241 agtaccagtt ggtcggcgag atattccccc accgccgctg ggcttgccag gtagcgtttc
    57301 acctctttca ctaactgcgc ggctaccacc tcggcactga cgcgcttttc accgacgacg
    57361 aaaaagcgtt cagtgatatt ttcactttcg acttccagcg agacggtatt acccggcccc
    57421 tggtcgcgcg gcaggttatg aatattctgt tcatgcaggg aaaaactccc cgccagtgta
    57481 gcgatttcac gctcagcaac atggcgcgac acaccagcta atagaacttc tccacgcatc
    57541 tgcacaatgt tcccgcgctc gccaagttgc aaggtgttaa acgatgccac gggcgagact
    57601 tccgttgcca ccacgccgcc tccggcagga taaaaaccgt gacgtaacag cgtggtttgc
    57661 tgatgaattc ctattttcgc cagcagcggc tccagcaccc ggcggataaa atccgcaggc
    57721 ggggccgacg ggttatcggt gcctccgctc acttcaacac gcgaaggtcc atcggcaaac
    57781 cacagcgcgg gcagcaccgt ttgcagcacc agcgtacagc ttccggcact accgatagca
    57841 aagcggtact cgccgccgcg cacggtgcca ggccggaaga ccagacgctg cgaccccagc
    57901 tccgcgcctt ccaccgttgc cctacaaatt tccgcagccg cttttaccgc ggtcagatgc
    57961 tggcgcaaca gccccggttt cgcccgcccg gcacgaatgc tggtgatggt aaatggctgg
    58021 ccggttatca tcgacaggct cagcgccgag cgcaggatct gcccgccacc ttcgccctgt
    58081 gcgccatcca gcgcaatcat ccttttcatc atttatcctt ttacgcacac cacctgacgc
    58141 agggtataga taacttccac cagatcgctt tgtgccgcca tcaccgcatc aatatcttta
    58201 tacgccatcg ggatttcgtc gatcacttcg gcatctttac ggcattccac atgcgcggtg
    58261 gcacgaattt gatcttccac gctgaacagt tttttcgctt tagtacggct cattacccgc
    58321 ccggcaccgt ggctgcacga acagaaagat tcttcatttc ccagcccacg gacgataaag
    58381 ctttttgctc ccatcgaccc tggaataatt ccatattgac cagcacgcgc agacaccgcg
    58441 cctttacgcg tcacgtagat ctcttcacca aagtgctgtt ctttttgcac atagttgtgg
    58501 tgacagttga tctcttccat cgccagcgtt tgtggctgtc tgaccgtttt ctgcgtaatg
    58561 ctctgcaatg ccgttaccac gttttccatc atcgcatcgc ggttaaggct ggcaaaaagc
    58621 tgcgcccagg ccacggcttt caggtaatca tcaaagtatt ccgtaccttc cataaagtac
    58681 gccagatcac gcgacggcaa cgtctcaagc gtttcctgca tctctttttg tgccagatcg
    58741 ataaagtaag tcccgatggc gttaccaatt ccgcgtgaac cggagtgcag cataatccac
    58801 acctggtccg actcatcaag gcagatttca ataaagtggt taccggttcc cagcgttccc
    58861 aggtgtttat agttattggt attcaggaaa cggggatatt tttgcgttaa ccactgataa
    58921 ccggcttcaa gctcagccca tttcgcatcg acgttaacag gcgggttttc ccatgcgcct
    58981 ttatcacgtt tacaacggcc agtggtacgc ccgtgcggca cggccgtttc aatcgcctga
    59041 cgcagctctg ccaggttttc aggcaggtct tccgccgtta acgcggtacg cagcgcgttc
    59101 attccacagc caatatccac gcccaccgcc gccggaataa tcgccccttt ggtcgggatc
    59161 acgctaccaa tggtggaacc tttacccagg tgtacatcag gcattaccgc aatatgtttg
    59221 aaaataaacg gcatcttcgc cgtattaata agttgctgac gcgcatcgac ttctaccggc
    59281 acgcctttgg tccacatttt taccggggca ttttcagtgg tcagtaattc gtaattcatt
    59341 ttgtttttct cttttcgttg tttgctgtcg tgataattgc aaccgtcgtg ccagaaaatt
    59401 aaataagcag attaattttt taattcattg tttttaaata ggttaaatct ttacgtccgt
    59461 aaacggagat tttccacaaa accaattcac cgataatgaa atatcgtctt ttataaggat
    59521 atctaagatg cgtaaaacag tggcttttgg ctttgtcggt accgtgctgg attatgccgg
    59581 acgcggcagt cagcgctggt cgaaatggcg tccgacgctt tgtttatgcc agcaagaatc
    59641 gttagtcatc gatcggctgg aattgttgca cgacacccgc tcgcgctcgc tattcgaaac
    59701 gcttaaacgc gatatcgcca gcgtttcgcc agaaacagaa gtggtgagcg ttgagattga
    59761 actgcataac ccgtgggatt tcgaagaggt ctacgcctgc ctgcatgatt tcgcccgtgg
    59821 ttacgagttt cagccagaaa aagaagacta tttaattcac atcaccaccg gtacccacgt
    59881 cgcgcagatt tgctggtttc tgctggcaga agcgcgttac ctgcccgccc ggctgataca
    59941 atcttcacct ccgcgcaaaa aagaacagcc gcgcggccca ggtgaagtaa cgattatcga
    60001 tctcgattta agccgttata acgccatcgc cagccgcttt gccgaggaac gccagcaaac
    60061 gcttgatttt cttaagtccg gcattgccac gcgtaacccc cacttcaacc gcatgattga
    60121 gcagatcgaa aaagtggcga tcaaatcccg cgcgccgatt ctgcttaacg gtccaaccgg
    60181 cgcgggcaag tcatttctgg cgcgacgcat cttcgagtta aaacaggcgc ggcatcagtt
    60241 tagcggcgcg tttgtggaag tgaactgcgc caccctgcgc ggcgataccg ccatgtcgac
    60301 gctgtttggt catgtaaaag gcgcgtttac cggggcgcgg gaatctcgtg aaggtttatt
    60361 acgcagcgcc aacggcggaa tgttgtttct tgatgagatt ggcgaactgg gcgcagacga
    60421 acaagcaatg ctgctaaaag ccattgaaga gaaaaccttt tacccgtttg gcagcgatcg
    60481 ccaggtgagc agtgattttc agcttatcgc cggaacggtg cgcgatttgc gccagctggt
    60541 tgccgaaggc aaatttcgcg aagatctgta cgcgcggatc aatctctgga ccttcaccct
    60601 gccgggtcta cgccagcgcc aggaagatat tgaaccgaac cttgattatg aagtggagcg
    60661 ccacgccaca ctcactggcg acagcgtgcg ttttaacacc gaagcgcggc gcgcctggtt
    60721 ggcttttgcg acctctcccc aggcaacatg gcgcggtaac tttcgcgaac tttctgccag
    60781 cgtcacgcgg atggccacct ttgccactag cggacgcatc actctggacg tggttgaaga
    60841 tgagataaac cgtctgcgct ataactggca ggagagccgc ccctccgcgc ttacggcgtt
    60901 gctgggcgca gaggcagaaa acatcgacct ttttgacagg ctgcaactgg aacacgtgat
    60961 agctctctgt cgccaggcaa agtcgctttc cgctgccgga cgcctgcttt ttgatgtttc
    61021 gcgccagggc aaagccagcg tcaatgacgc ggatcggcta cgcaaatacc tggcgcgttt
    61081 tggtctgacg tgggaagccg tgcaggatca gcacagctcc agttgaatat gatggtccgt
    61141 cagcacctgc attacgctta ctggcggcgg ggcgtcggtg tagacggcat ctaccatgct
    61201 gatgctgccc atattgacca tcgcgttacg gccaaatttc gagtgatcga caaccagcat
    61261 aacgtggcgc gagttctcaa taatggcgcg cttggtgcga acttcgtggt aatcgaactc
    61321 cagcagcgag ccgtcgctat cgatgccgct tatccccaga atgccgaaat caaggcggaa
    61381 ctgggagata aaatcgagcg tcgcttcgcc aatgatcccg ccatcgcggc tgcgtaattc
    61441 gccaccggcg agaataatgc ggaaatcttc ttttaccatc aacgtgttag caacattgag
    61501 attgttggtg acaatacgca aattgctgtg attaagcagc gcgtgcgcca ccgcttccgg
    61561 cgtggtgccg atatcgataa acagtgtcga gccgttgggg atttgctccg ccactttgcg
    61621 ggcaatcctc tctttttctt cggtctgggt ggctttgcga tcgtgccacg gcgtgttaac
    61681 cgaactggaa ggcagcgccg caccgccatg gtgacgcagg atcaggtttt gctccgccag
    61741 ctcattgagg tcgcggcgaa tagtctgcgg gctgacggag aaatgctcta ccagctcttc
    61801 agtactgaca taaccctgct gtttaaccag ttcgataata ccgttgtgac gttgtgtttg
    61861 tttcatttat aaatccctgg aattattttc gttttcgcgc attgagcgaa tcaacaaaag
    61921 ccatcgctaa acccacggct aacccggcga tgtgtgctcc gttcgccatc gacatcccaa
    61981 acaaatcaaa ccatccggcg acaatccaga tcagcgcaaa gataattaac ccacgttgca
    62041 ggtaaatgcc actttgcgga tcgcgttcgc cacgtagcca gacgtagccc atcagcgcat
    62101 acaccacgcc agaaagcccg ccaaaccacg gcccgctgaa tttttgctgc acatagccgc
    62161 ttaacagggc gctaatgaga gtaataacaa ttagcttacc gctaccgagg cgtttttcca
    62221 ccgcaccgcc gagataccac caccagagca ggttaaagag gatatgcatc agcgagaagt
    62281 gcattaacgc gtgggtgaag taacgccaga actcaaattt cagtgttgga tcgaatggcc
    62341 aggccagcca taacatcact tcctgatcgc cgagaatttg catggcgata aacaccacca
    62401 cgcaggcgat catcaccacc caggttaccg gacctgcgcg ttcacgcaag gcagcaaaga
    62461 aaggataacg gcgataatgc agaccactgc cggtatggcc cgcctgccag ctggccgcca
    62521 gataacgcgg atctgccggg ttttcgagaa aacgcgccag ctccgcccgc acgcgctcgg
    62581 cctgggactc atccgccagc cagacatcgc tttggttatg ttgttgaatc gtgaggataa
    62641 caccctgcgt cgccatataa tcaacaaacg cctgcgccac gcgggggtta gcaaaagagg
    62701 taatcatcaa catcgttgct gtcgcttatt ccacacaaaa ggggacagta taaagcgtta
    62761 cgcgccgtac gccacctctg cgggaaactg acgctgccag gcttcaaaac cgccgtcaat
    62821 gctatagacc acatcgtagc cctgttgcag cagatactgc gccgcgcctt tgctgctatt
    62881 gccgtgataa cacatcacca tcaccggagt gtcaaagtcg ttatcacgca taaacgcgcc
    62941 cagcgtgtcg ttggttaaat ggaaagcctg caccgcatgc cccatagcga aactctgtgg
    63001 atcgcgaata tcgaccagca ccgcctcttt ttcctgcaac ttctggtgcg cgtcggcaac
    63061 gttaatacat tcgaacagat ccatgcgtct ctctttcttt acaaacaagt gggcaaattt
    63121 accgcacagt ttacgtcgaa gcggcagata aacgccataa tgttatacat atcactctaa
    63181 aatgtttttt caatgttacc taaagcgcga ttctttgcta atatgttcga taacgaacat
    63241 ttatgagctt taacgaaagt gaatgagggc agcatggaaa ccaaagatct gattgtgata
    63301 ggtggcggca tcaatggtgc tggtatcgcg gcagacgccg ctggacgcgg tttatccgtg
    63361 ctgatgctgg aggcgcagga tctcgcttgt gcgacctctt ccgccagttc aaaactcatt
    63421 cacggtggcc tgcgctacct tgagcactat gaattccgcc tggtcagcga ggcgctggct
    63481 gaacgtgaag tgctgctgaa aatggctccg catatcgcct tcccgatgcg ttttcgcctg
    63541 ccacatcgtc cgcatctgcg cccggcgtgg atgattcgca ttggtctgtt tatgtacgat
    63601 catctgggta aacgcaccag cctgccggga tcaaccggtt tgcgttttgg cgcaaactca
    63661 gtgttaaaac cggaaattaa gcgcggattc gaatattctg actgttgggt agacgacgcc
    63721 cgtctggtac tcgccaacgc ccagatggtg gtgcgtaaag gcggcgaagt gcttactcgg
    63781 actcgcgcca cctctgctcg ccgcgaaaac ggcctgtgga ttgtggaagc ggaagatatc
    63841 gataccggca aaaaatatag ctggcaagcg cgcggcctgg ttaacgccac cggcccgtgg
    63901 gtgaaacagt tcttcgacga ggggatgcat ctgccttcgc cttatggcat tcgcctgatc
    63961 aaaggcagcc atattgtggt gccgcgcgtg catacccaaa agcaggccta cattctgcaa
    64021 aacgaagata aacgcattgt gttcgtgatc ccgtggatgg acgagttttc aatcatcggc
    64081 accaccgatg tggaatacaa aggcgatcca aaagcggtga agattgaaga gagtgaaatc
    64141 aactacctgc tgaaagtgta taacacgcac tttaaaaagc agttaagccg tgacgatatc
    64201 gtctggacct actccggtgt gcgtccgctg tgtgatgatg agtccgactc gccgcaggct
    64261 attacccgtg attacaccct tgatatccat gatgaaaacg gcaaagcacc gctgctgtcg
    64321 gtattcggcg gtaagttgac cacctaccgc aaactggcgg aacatgcgct ggaaaaactg
    64381 acgccgtatt atcagggcat tggcccggcg tggacgaaag agagcgtgct gccgggtggt
    64441 gccattgaag gcgactgcga cgattatgcc gctcgcctgc gccgccgcta tccgttcctg
    64501 actgaatcgc tggcgcgtca ttacgctcgc acttacggca gcaacagcga gctgctgctc
    64561 ggcaatgcgg gaacggtaag cgatctcggg gaagatttcg gtcatgagtt ctacgaagcg
    64621 gagctgaaat acctggtgga tcacgaatgg gtccgccgcg ccgacgacgc cctgtggcgt
    64681 cgcacaaaac aaggcatgtg gctaaatgcg gatcaacaat ctcgtgtgag tcagtggctg
    64741 gtggagtata cgcagcagaa gttgtcgctg gcgtcgtaag gatgatgccc ggttgtgaag
    64801 tgcaaccggg ctatttggat tccttagact attcattgta aataattgaa taacggcccc
    64861 tgagctaaaa tcgccaaact taagcacgtt acccaatcgc cccacttctt cctctggttt
    64921 ctattttttc tgcaccaatg gcaataatat cccaatgcaa aaccaagctg tgcactaatc
    64981 gggccgacaa aatcagtcca aggctgcggc caaaaagggg aaaaattcag gggaagccag
    65041 acaaacgtca gaaagaaatt tcggatattt tccagcaacg ctgatttctc tggagaaata
    65101 taaagaatga aattcgagag aattaaccag aaatagaccg gcgaaaagac cagccagcaa
    65161 tgcagtctgt tttttaattc aggaggcgtt ctgcgggaga attgccaacc gatgccagcc
    65221 attacactga aaaaaagtgc atattcaacc attaactcaa gttgtagttc ctgaagagaa
    65281 atacgcacaa ccaggagcgg aaaggagaat attatttctg ccagaaaagt taacgtgaat
    65341 ataagtacgg ctaagacaat aaccgtcggc cataccaata atggcacgat aacaaaaccg
    65401 agaattacag ggggaatata aagccggaat ttaatcattt ttattttcct ggtgattcgg
    65461 atgatgcgtc atacatcgcg cataaacact catcaattat ccagtcgtct tcccagacct
    65521 gatattctgt cattggttcg ggctgtttta gcggattctc aatcgcttgc cgcgctcttt
    65581 ctttcagtaa aggatgatta tttctagccc aggcattgat ttgggtggta atgacgttat
    65641 cgatatcgtc ctggttatct ctgatataat cctcacaata tctgttcaat aaacaggcaa
    65701 gagaaacggt cgaccaaaag ccgggaactg aattaatggc atccagcaat ggcgcaagag
    65761 cgatatcggc acggaaaaac atttccagca tatactgtaa ttcgacagct tcatcgccgg
    65821 atacccaatc agtcatatac tggcaggcaa atcgttgcaa aattttccat tcatcctcac
    65881 gccaattttc tttactggca aggtttatac gccgtagaga aaatacttcg tgaatattgt
    65941 caaactgccc ctgtgcaaca aattccagta aacgcggcag aaaatagcgg acctcatcgc
    66001 tattttgcgg atcaggccct gggctactat tccatgcatt gattaaggaa tacgagatcg
    66061 ctcgtaacga tgtactccgt aatacctttt gttcctgctg actcaggcaa tattcacaac
    66121 aaaccacaaa tttctgcggc accggataac gacgaaaaat atgataaatc tgctcaatta
    66181 atgcctgcat ggcggggctg ggttgcataa ttaccccctc gcccgctgat cgcgtgtaaa
    66241 cggttgataa acaaaacgag cattcgccac gttcaggcga ataatggcac tacgagagag
    66301 ggaaaagctg gggcgaatgc aactattgca gtctcgacag ctttcttcag cgcaattttc
    66361 cactgtgtaa taacgagcgt agagtttcag ttccgcttgc ttatcacgaa atccgcgtaa
    66421 actgttatcg ttatgaaatt tccaggcatc tttaaagacc tgaaaaatgt agatatcctc
    66481 aatccaggac tcacattttt taagcgggcg ctttgctatg atcacccgct catccgggtt
    66541 tagcatcgcc gtaaattgaa cggtgaggtc atttgtcgtg ttcagatcac attgaacatc
    66601 tggtacatca ctgatatagg ggtcaaatcc aaagtcagca ccacaggcac aaagacggct
    66661 aatggtggcg gtatcgaggg aaaatcccgg ccatacattg ctggacgtta agccaatatt
    66721 taatgtgaca ttatatcgaa gcaatccctc aagaccgtca gcaccgacga acttttcccc
    66781 ttcatccagg gcctggttaa tgagttgctg aacaatgcct tcatcccagt atgccgattt
    66841 gcagttggca atcgtaatat ccacgcctgt gaatggatca gtaccgacaa ggcttgcaaa
    66901 taatgtatta actaattcca tttttattat ccgccttaat gcaacgtttt atacatcggc
    66961 acataaccta catcttccac caggctctgc ccctgcggcg ttaaaaacca ctccaccaat
    67021 ttttgtgttt ctgacgtcat attttcccgc gttaccataa aggcatcgac gatataggga
    67081 tatttgccgt tgcgaatgtt ttcggcagtc ggtgcaatac cgttaatcgc tagcagtttt
    67141 atatttttat cggcgttcat ttgtgttgcg taataacgga aggtgtaacc tattgcgttg
    67201 tttgtattac ggtattcggc aacgacttta atcattccct ccatcatact tgccacttct
    67261 gtttcctgcg gcgagatcat gcggacattt ttcatgacct gggattgcat caccgtctgg
    67321 ctaccagagt cttccgggcg ttgccaggtc tggatctcct gatcgttacc gccaaccgtg
    67381 cgccagttgg taattgcacc actgaagatg tcacgcactt gttgttcggt cagggaatta
    67441 accgggttat ctacattgac gatgaaaaca aacgcttcac gggcaaaagg cgtgtaaatc
    67501 aaagtgacgc ccgattcctc cgcgcgtttt ttctgcccac cggaaggttg agccacaaag
    67561 ataatatcgg cattaccttt aacaatcttg ttatatgctt cgggagtacg agagttcgcc
    67621 agatattccc attcgtgaaa atcttccggc aaaacgctta gtgcataaaa ggcagaggca
    67681 taaatggggt acgccgccgt tgcgccatca agtcgcggcc agttttgcgt gaactgaatt
    67741 tgcggtttac cacgcagtgg tgtcagttga ttattgagtt tatcgggtcg ccaggcccag
    67801 gtatcaatat tttcacgcac accgacgccg ggattaagct gtttatataa ataagcctgg
    67861 taaccggcaa caaaaccaag catgagaagg ataaacaaga gagaattacg gcaacgtaac
    67921 ccggacgtgc ccgttaaagg atatctggtc ggccagccgt accccagcga aaaactgata
    67981 tgcgcgccaa caggtataat gactaaccac cagtactcac caccgactaa tgaggctaac
    68041 aaaacgccca gccaggggag cataagatca gccaaccaac ccgctcccat ctggcgaaat
    68101 tgataatctg ccagatgcag cgcgattatc cagaccccca gggttaataa tgcgggtact
    68161 aaaaaaagac attgtcgcca gacggctatt tctctttttt ctggtgcact atcgtccgcc
    68221 cacactcgcc ccgagaaaaa tagcattaat gcgcccagcg ccagcataaa aatgttgagc
    68281 agaaggtaaa ttgttggcgt gataaagata ttacaaactt caataatacc ggcaagtccg
    68341 acacccagca tggcaataac cgccgccaaa aactgcgcca gaatggggat gccgaaaaaa
    68401 gtcattacca gcgaggtcaa aatccatttt ctgttttgca ttattctttc cattctttct
    68461 gaatggcgaa attatactcc ccgagtcccc ttgccccttc tggacacttt tccgaaatga
    68521 tggcgaaaaa aacgggaccc tttggccccg ttctatttat tagtgaaatt acaatctcac
    68581 cggatcaata tgccagatat gatcggcgta ctctttgata gtacggtcag aagagaagta
    68641 gcccatattg gcaatgttca gcatcgcttt tgcggtccac tcttcctgaa gctcgtagag
    68701 ttcgtcgact ttatcctgac aatcgacata gctgcgataa tccgccagaa cctgatagtg
    68761 atcgccgaag ttgatcagcg aatcaaccag atcgcgatag cgacccggat cttccggact
    68821 gaatacaccg ctgccgattt gcgtcagcac ctgatgcagc tcctcatctt tctcgtagta
    68881 ttcacgcggt ttgtagccct gacgacgcag ttcttccact tcttccgcag tgttaccaaa
    68941 gataaagata ttgtcagcac cgacatgatc cagcatctcg acattcgcac cgtccaacgt
    69001 accgatagtc agcgcaccgt taagcgcaaa cttcatgtta ctggtgccgg aagcttccgt
    69061 ccccgccagc gaaatctgtt cagacagatc ggccgccgga atgatcaact gcgccaggct
    69121 aacgctgtag ttcgggatga acacgacttt cagcttgtcg ccaatctgcg gatcgttgtt
    69181 gatcactttc gctacgtcat tgatcaaatg aataatgtgc ttcgccatgt aataggccga
    69241 agccgcctta ccgccaaaaa tattcacgcg cggtacccac ttcgcatccg ggtcggcctt
    69301 gatgcggtta tagcgggtaa tcacatgcaa cacattcatc aattgacgtt tgtattcgtg
    69361 aatacgtttg atttgtacat cgaacaacgc ctttggattc accaccacat tcagctgctg
    69421 ggcgatatac tctgccagac gctttttgtt ctccagcttc gcctgatgca cagcgtgatt
    69481 aaccattggg aaatcacagt gttgttgcag ctcattaagc aggctaaggt cggtgcgcca
    69541 gttacggccc aggtgttcgt ccagcacggc tgaaagcgat gggttcgcta ccgctagcca
    69601 gcgacgcggc gtcacaccgt tggtgacgtt ggtgaaacga cccgggaaga ttttcgcaaa
    69661 gtcggcaaac aacgattgca ccatcagatt agagtgcagt tccgatacac cgttaacttt
    69721 gtggctcaca acaaccgcca gccaggccat acgcacacga cgaccgttgg attcatcaat
    69781 gatcgacgcc cgtcccagca gatcggtatc gttcggatac tgttcctgca aggttttcag
    69841 gaaatagtcg ttgatttcaa agatgatctg caggtgacgc ggcagaattt tacccagcat
    69901 atcaaccggc caggtttcca gcgcctcgct catcagcgtg tggttagtgt aggagaagac
    69961 ctgacaacac acctcaaacg cgtcgtccca gctaaattgg tgctcatcga tcagcagacg
    70021 catcatctca ggaatcgaca gtaccggatg ggtatcattg agatgaatcg cgattttatc
    70081 cgccaggtta tcgtaggttt tatgcaactg ataatggcgg cttaaaatgt cctgaatggt
    70141 cgaggaaacc aggaagtatt cctgacgcag gcgcagctca cgcccggagt aggtggagtc
    70201 atccggatac agtacgcgag atacgttctc ggagtggttt ttatcttcca ctgccgcgaa
    70261 gtagtcaccc tggttgaatt taccgaggtt aatttcgcta ctggcttgcg cactccacaa
    70321 acgcaacgtg ttggtcgcgt cggtatcgta accagggatt atctgatcgt aagcgactcc
    70381 cagaatctct tcggtttcaa tccagcgcgt ttttttacct tcctgctgaa tgcgaccacc
    70441 aaaacggact ttatagcgcg tgttgtggcg tttgaattcc cacgggttac cgtattccag
    70501 ccagtagtct ggcgactctt tctggctacc gttaacgatg ttctgcttga acataccgta
    70561 gtcatagcgg atgccgtaac cgcgccccgg caaccctaac gtcgccagag aatcaaggaa
    70621 gcaagccgcc agacgtccca ggccaccgtt accgaggccc ggatcatttt cttcatcaat
    70681 cagctcttcg agatttaacc ccatcgcttc cagtgcgccc tgtacatctt cgtaaattcc
    70741 tagcgacaac atggcgttgg agagcgtacg gccaatcaaa aactccatcg acaggtagta
    70801 aacctgacga gtttcttgcg acaactgggc acggtttgaa cgtaaccagc gctccacgag
    70861 acgatcgcgc acagcaaata acgttgcgtt cagccattca tgtttattgg cgacgaccgg
    70921 gtcctttcca atcgtaaaca tcagcttgta agcgatagag tgcttaagag cttctacgct
    70981 aagcgtgggc gatgaatatg taaacggagc attcatatag gcgtttcctg aaaactattt
    71041 caagcgatag taaagctcac ggtacgactt cgccgcgacc tgccagctaa aatccattgc
    71101 catagcctga cgttgcacaa accgccacag tgaaggacgg gaccacagta caaaagcacg
    71161 ccgaatagcc cgtaacagcg accaggcatt actatcttca aagacaaacc cactggcgac
    71221 gccatctgca aggttctcaa gagaacagtc agaaaccgta tcagcaagcc caccggtgcg
    71281 ccgcactaac ggcagcgtac cgtacttcaa tccataaagt tgcgttaagc cgcacggttc
    71341 aaaacggctg ggcaccagaa tgacgtccgc gccgcccata atgcgatgcg aaaatgcttc
    71401 gtgatagcca atctgaacgc ccacctgacc ggggtattcc gctgccgccg caaggaaacc
    71461 ttcctgcagc accggatcgc ccgcgccgag tagcgccagc tgcccgccct gctccagaag
    71521 acccggtaag gcttccagca ccaggtcgag acctttctgg ctggtcagac ggctcaccac
    71581 tgcaaaaagc ggcactttat cgtcaacctt aagccccatt gcgatttgta actggcgctt
    71641 attttccgct ttatcttcca acgtatcgcg ggtgtaacgc gaggccaaca gtaagtccgt
    71701 ctctggactc cagattttct cgtccacgcc gttcagtacg ccggaaagac gcccttcacg
    71761 gtgacgctgt tgcaacagac cttccatacc gtaggcaaac tgcggttcgg tgatctcgcg
    71821 agcgtaggtt ggactgaccg ccgtaatgtg atcggcatag tacagaccgg ccttcaggaa
    71881 agagatttgt ccgttgaatt ccagcccatg aatattaaag aatgaccatg gcaattggat
    71941 gtcattcata tgatgtgcat aaaacatgcc ttgataggcc aggttgtgca cagtaaacac
    72001 cgacttcgcc ggacgcccgc gcgccgccag atacgcaggc gcaaggcctg catgccagtc
    72061 gtgcgcatgc accacatcag gacgccagaa tgggtcaagc ccgctggcca tttctgcccc
    72121 aacccacccc agcagcgcaa aacgcaatac gttgtcggta taggcaaata agttggtatc
    72181 gtgatacggg cttcccggac gatcatagag atgcggcgcg tcaatcaggt aaatgccaac
    72241 cccgttgtaa tgaccgaaca acagcgtgat atgtccggcg aaggtatcac gacgggatac
    72301 tacctgcgca tcggtcacgc cacggcgaat atcgggaaat gcaggcaaca gtacgcgagc
    72361 gtcaacgccg tctgcgattt gtgctgcggg taatgcccca ataacatcag ccagaccgcc
    72421 ggttttaagc agcgggaaca tctctgaaca tacatgtaaa acctgcatta tcgctcctgt
    72481 ttatgcccta acttccgtag catttcgcgc gttaccagca cgatgccttc ttctgaacga
    72541 tagaaacgac gtgcatcttc ctctgcgttt tcaccaatca ccatgccttc cggaataaca
    72601 caagcacgat cgatgacgca gcggcgcaga cggcacgagc gacctaccca tacttccggt
    72661 aacaatacgg cggaatcaat gttgcagaat gaattcacgc gaacgcgcga gaacagaacg
    72721 gactgcacca ccaccgaacc ggagatcaca caaccgccgg aaaccagtga gttaagggtc
    72781 atcccgtggc taccggagcg atcctgcacg aatttcgctg gcggtaatga ttcattgtag
    72841 gtgcgaattg gccaattgcg atcgtacata tccagttccg gcaccacaga ggccagatcg
    72901 aggttcgctt tccagtaagc ttccagcgta cccacatcgc gccagtacgg ctcggcatcc
    72961 gggtcggatt gtacgcaaga gagcgggaac gggtgcgcat aggccagacc ggcttcggtg
    73021 atcttgggaa tcaaatcttt gccaaagtcg tggctggagt tctcatcgcg atcgtcttct
    73081 tccagcagtt catacagata gtcggcgtca aagacgtaga tacccatact cgccagagat
    73141 ttgctcggat cgttcggcat tgacggcggg ttagcaggtt tttcaacgaa ttcgataatt
    73201 ttatcgttct catcaaccgc cataacgcca aatgcggagg cttcttcaat cggtactggc
    73261 atacaagcaa cggtgcaacg tgcgcctttt tcgacgtggt cgataagcat acgcgagtag
    73321 tcttgcttgt agatatggtc gcccgccagg atcaccacgt attccgcttt ataacggcgg
    73381 ataatgtcga ggttttgggt gaccgcatct gcggtgccgc gataccagtt ttcccctttc
    73441 attctctgct gtgctggcag cagatcgaca aactcgttca tttcttcatt gaagaatgac
    73501 cagccgcgct gaatgtgctg caccagagtg tgggactggt actgggtgat cacgcccata
    73561 cgacggatcc cagagttgat gcagttagac agcgcaaagt ctataatgcg gaacttaccg
    73621 ccgaagtgta cggccggttt tgctcgctta ttggttaaat ccttcaggcg ggtaccacgt
    73681 cctcccgcca gtatcagggc aacagatttc aatggcagct ggcgcgccaa cattaagtga
    73741 tcgttcttct ctaaactaac catgactaac tcctttttta tcatctctgg aacacacaca
    73801 atccgtgtgc aggtccctgc cagacagccg taatcactgg gttatcctct ccagcgaatg
    73861 ggggaatggc gtgccactcc ccagcaggta aaacaatctc tgttacctca agcgtggcgt
    73921 taattgcgat caaaaagcga tccgagagca gaatttgcag ctgtttcggc ccgttttgcc
    73981 actcatccgt gcttaaaggt tgagcatatc gatttagcca acggacattg ccgtcgcctt
    74041 cttcccacca gcgattctcc accaaagcgg gaatacgctt gcgcagatgg attaacgcgg
    74101 cggtaaatgc ggttaaacca ctgcttgcct gcgaccagtc caaccaggtt aattggttat
    74161 cctgacagta ggcattgtta ttgccatgct ggctgtgacc atgttcgtca ccggccagta
    74221 acatcggcgt accctgggag agcaacaacg ttgttaacag ggcgtgaatg ctgtcgcgcc
    74281 gccgttcaac caggtcaaga gaaccgccta acccttcttt accatgattg ttactgtaat
    74341 tgttgttggt cccgtcgcga ttttcttctc cgtttgcttc attgtgttta tggttgaagc
    74401 aaacgcagtc gcgaagcgta aaaccgtcat gcgcggtgac gagattaatc gcggcactcg
    74461 gcagacgacc attacgttta aaaacatcgc tggaggcagc aaaacgcccg gcaaacgccc
    74521 ccagaggcaa atcataatgt agccagaaac gacgggcagc atcgcggaaa tgatcgttcc
    74581 actcggcaaa cagcggcggg aaatttccca cctgataacc accaggagcg atatcccacg
    74641 gttcagcaat taacttcacc tgcgagagca ccgggcagtt ctggatagcg gtaaacaacg
    74701 gcgcatcctg acggaactct ggcgtacggc ccatgactgc cgccagatca aagcggaaac
    74761 catcgacgtg gcaggtttct acccaataac gcaggcaggc gctggcataa tccaccaccg
    74821 ccggatgact caaattgagc gtgttgccac aaccggtcca gttgtgataa tcgccgtctt
    74881 ctcttatcca ataatagcta cggttgtcga tcccacgcag cgagaataac gggccgtcga
    74941 ggtccagttc cgcactatgg ttgagcacga tatcaagaat gacttcgata cccgctttat
    75001 gcagtgcttt gattgcatcg cgaaactcat gcagcgccgt ttctggcgag caggcatacg
    75061 ccggatgcag cgcaaacatc gccaccgggt tgtaacccca gtagttactt agccccatgc
    75121 gttgcagacg tggttcactg gcaaactgcg ccaccggcag cagttccagc gcggtaatgc
    75181 ccaactgttt caaatagttg atcatcaccg gatgccccag ggctttataa gtgccacgga
    75241 tctcgaccgg gatctccggg tgcaagtacg ttaatccttt aacatgggct tcataaatga
    75301 tggtgctgcc ccacggcgtg cgcggcgggg cgtcatcttc ccagtcatag tgatcaacca
    75361 ccactacgca tttcggcgca atggcggcgt tgtcgcgata gtcaggttca ttatgaccgg
    75421 cgtgcagcag cgggttatct ttaaactccc cgtcaatttg ccgcgcgcaa ggatcaatca
    75481 acaacttcgc cgggttaaag cgatgcccct cggcgggttg ccaggggcca tgaacgcgat
    75541 aaccataacg caaacccggg cgcgcatccg gcagataacc gtgccaaatg tcgccactgt
    75601 gccctggcaa gtcatagcga tgttcctggc cattggcgtc aaagacacac agttctaccc
    75661 gctcggcatg agcggagaaa agtgtgaagt tgacgccctg accgtcgtaa tgcgcgccga
    75721 ggggagcggg tttgccaatg gcgagttgtg tcattctgcc tcccgaacca gccagatagt
    75781 ggccagcggt ggtagcgtca ggcttagtga atgctgacga ccgtggctgg caatctcatc
    75841 gctgtgtacc gtgccgccat tgcctgcatt actgccgtga tagtgcatgg aatcggtatt
    75901 gaggatttca cgccatttgc ccggctggtt tatgccgaag cgataatcat gacgcggtac
    75961 cggcgtaaag ttactggcaa cgatgatttc gttaccctct ttatcgcgac gcacaaagat
    76021 cagcaccgag cgttctttgt catccaccac cagccattca aagccgtacg ggtcaaaatc
    76081 cagttcatgc attgctttat ggtggcggta ggtgaggttc agatcgcgca ccagacgctg
    76141 gacaccgtgg tgccagttat cgccgccttc caacagatgc cagtcgaggc tggcgtcatg
    76201 gttccactcg cggccctggg caaattcgtt acccatgaac agtagtttct tgcccgggaa
    76261 tgcccacatc cagccatagt aggcgcgcag gttcgcgaat ttctgccatg cgtcgcccgg
    76321 catgcggtcg agaatcgatt ttttaccgtg gaccacttca tcatgcgaca acggcaggac
    76381 gaagttttca gtgtagttgt agagaatccc gaaggtcagt ttatcgtgat gatactgacg
    76441 ataaaccggg tcgagcttca tgtagtccag ggtgtcatgc atccagccga ggttccactt
    76501 gtaccagaag cccagaccgc ccatatcctg cggacgagaa acgccaggga aatcggtaga
    76561 ctcctcagcc attgtcaccg caccggaaac ctgctcacca agaatacggt tggtattacg
    76621 caagaattca atcgcttcaa gattctcgcg cccgccaaat tcgttcggga tccactcccc
    76681 ctctttacgg ctgtagtcgc gataaatcat tgacgccacc gcatcgacgc gcagcgcatc
    76741 aataccaaaa cgttcaatcc agtaaagcgc gttaccgacg aggaagttac tgacttcacg
    76801 gcgaccatag ttgtagatca gcgtgttcca gtcctgatga tagccttcac gcggatcgct
    76861 gtgttcatac aagttcgtgc catcaaattc ggcaagcgca aagtcatcag tcgggaagtg
    76921 gcctggcacc cagtcgagaa tcacgttcag accagctgcg tgtgcggcat caatgaaata
    76981 acggaagtcg tcgcgagtac caaaacggcg ggttggtgca tacaggccgg ttggctgata
    77041 accccaactg ccatcgaagg gatgctcgtt aatgggcagt agttcgaggt gggtaaagcc
    77101 catccattta gcataaggca ccagttgatc ggccagctcg cggtagctca accagaaatt
    77161 gttatcggtg tggcgacgcc aggaacccag gtgaacttca taaatagaga ttggcgcatc
    77221 aaactgattc gcttttttgc gctcttcagt ctgtacaacc ttttccggca gcccgcaaat
    77281 aagagacgcg gtttccgggc gcatttgcgc ttcgaaggca taagggtcgg acttcagacg
    77341 caagttgcca ttggcatcaa tcatctcgta tttatagagc tgaccgttat gcgccccagg
    77401 gataaacagt tcccaaatgc cgctctcttt acgcagacgc atcgggtgac ggcgaccgtc
    77461 ccagtagttg aattgcccaa ccaccgagac ccgacgggcg tttggagccc agacagagaa
    77521 acgcgtacct gtgacgccat ccatagtatc tgcatgcgcg cctaaggttt catacgggcg
    77581 caggtgagta ccttcagata atagccaggc atccatttcc tggattagcg ggccaaaacg
    77641 gtaaggatca tcaatcaggt tttgctgacc atgccagaca acagccaact gatagcggaa
    77701 aaaattctta cgtcgcggaa tgacaccgct aaagaatccc cgtgagtcga gacactccag
    77761 ttttgcgagt ttgcgcccgg ttttcggttc aatcacccac acatcggtag cgtcgggtaa
    77821 aagggcacgg acttccagtc ccgcggtggt tttatgcatt cccagtacgg aaaaaggatc
    77881 cgcaaaatgg cctgcaatta gcgcgttaat cacgtctcta tcgatacgat cggacatgct
    77941 tgtcttcctg ttttattgtg tcaccccatc caattggatt tttgacttct ggttgtgaca
    78001 tttttttgac ctgaacggcg cagcactctg tgcatcctct ctgcgtcgtc ctcacttcag
    78061 gtaaggctgt gaatactcat gtattcagcc acccttaaag aatagccaat gctctattta
    78121 actcccggta aatcatgaaa catctgcgct tactcctgta ttacgcacta acaggggcgg
    78181 catcgcgccc cagatttaat gaataaagat tacgccagtt gacgaagcat ccgacgcagc
    78241 ggctccgcgg ccccccacag cagctggtcg cccacggtaa aggctgacag gaactctggt
    78301 cccatattca gcttacgcag gcggcctacc ggcgtggtca gcgtgccggt aacggcagct
    78361 ggggttagct cacgcatagt gatttcccga tcgttcggaa cgactttcgc ccacggattg
    78421 tgcgcagcca gcagttcttc cacggtcgga atagacacat cttttttcaa tttaatagtg
    78481 aatgcctggc tgtggcagcg caatgccccg acacgcacac ataaaccatc taccggaatt
    78541 acggaagatg tgttgaggat cttgttggtt tccgcctgcc ctttccactc ttcgcggctc
    78601 tgaccgttat cgagctgttt gtcgatccac ggaatcaggc tacccgccag cggcacgcca
    78661 aagttatcca ccggcagctc accgctacgg gttaaggttg tgactttgcg ttcgatatcg
    78721 agaatagcag aggacggggt cgcgagttca tctgccacat ggccatacag atggcccatc
    78781 tgggttaata actcacgcat atgtcgcgca ccaccgccgg aagcggcctg gtaggttgca
    78841 acggacaccc aatcaacaag atcattggcg aataaaccac ccaacgacat caacatcagg
    78901 cttacggtac agttaccgcc aacaaaagtc ctgatgccat tatttaatcc gtcggtaatg
    78961 acgtcctgat tgacggggtc aagaatgatg atggcgtcat ctttcatgcg cagagacgat
    79021 gctgcgtcaa tccagtaacc ttgccatccg ctttcacgaa gctttggata gatttcgttg
    79081 gtataatcgc cgccctgaca ggtcacaatg atatcgaggg cctttagcgc ctccagatca
    79141 aaggcatcct gaagtgtgcc agtggttccg ccaaaagacg gcgcagcctg gccaagctga
    79201 gaagtagaaa agaagacagg gcgaatggcg tcgaagtcgc gctcttcaac catgcgttgc
    79261 atgagaacgg agccgaccat accgcgccag ccgataaaac caacattttt cataagcgtt
    79321 ttttcctgca aagatgtgtg ctgtataaat gtgccggtct cctcttggca catctttcac
    79381 catacaaaaa gcagccaaag tcgcaagtga aattaatcaa tgatagcgaa gccatcagta
    79441 atgcgactta tcctgctttg ttagcacgca gaaagtccgc ggcaattatc agggaatttg
    79501 agttatgaat gaaatcattt ctgcagcagt tttattgatc ctgattatgg atccgctcgg
    79561 aaacctacct attttcatgt ccgtactgaa acatactgaa ccgaaaagac ggcgggcaat
    79621 catggtgcga gagttgctta ttgctctcct ggtgatgctg gtgttcctgt ttgcgggtga
    79681 gaaaattctg gcatttctca gcctgcgagc agaaaccgtc tccatttctg gcggcatcat
    79741 tctgtttcta atcgccatta agatgatttt ccccagcgct tcaggaaata gcagcgggct
    79801 tccggcaggt gaagagccat ttatcgtgcc gttggcaatt ccgttagtcg ccgggccgac
    79861 tattctcgcc acgctgatgt tgttgtctca tcagtacccg aatcagatgg ggcatctggt
    79921 gattgctctg ctgctggcct ggggcggcac ctttgtcatc ctgctacagt cttcgctatt
    79981 tttacgtctg ctgggcgaga aaggggtgaa cgcacttgaa cgcctgatgg gattgattct
    80041 ggtgatgatg gcaacccaga tgttcctcga cggcattcga atgtggatga aggggtaacg
    80101 aggagagttt ttcgaaaaga acccggtagc gtcacaacta ccgggcgaac aaacttaact
    80161 caacagctgg aacgcaatca tcccaacgat ggcaccgaca gtgccgagga tggtttccat
    80221 catggtccag gttttcagcg tttcggcttc ggtcgcgccg gtaaatttac cgaacaacca
    80281 gaaaccggcg tcgttaacgt ggctgacaac aatcgaacca ccagcgatac aaatcgacag
    80341 cgccgccatt tgcgcaccgg agtagttcag ttgttcaata accggcatca ccagtcctac
    80401 cgccgttaaa caggctacgg tggcagaacc ctgaatgatg cgcactgcag cggccagcac
    80461 gaagcaggtg atggctatcg gcaggcccat gccagttaac gcttcgccca gtgccggacc
    80521 tacgccagag tcaaccagca cctgtttgaa cacgccacct gcaccaatca ccagcagaat
    80581 gatccccgcc ggttgcagcg cgtgaccgca aatctccatc actttgtctt ttggcatgcc
    80641 ctgacgcatt gccaggccat aaatcgctac cagacaagca accagaatcg cggtaaacgg
    80701 atgaccaata aactcgaacc attcgtaagc ggtagagcct tctggcacaa aacgcgcggc
    80761 aatggttttc agccccacca gcaccagcgg caacaggatc agcgacaggc tgaatccgaa
    80821 agatggcatt ttgccttcgc cgagatgcgg ttcgctgatg tcgtcaggaa tatgcaactc
    80881 cacgtagcgg ctgatgaaat taccccacag cggcccggca ataatcattc ccggaattgc
    80941 cgcacacagg ccaatcagga tcatccagcc aaaatcggcg ttcatctgcg atgcgaggag
    81001 cattggcgct ggcccaggca ccaggaacgc agccgcggcc gccacgcctg cgaataatgg
    81061 gattaccagc ttcaccaggt tcgtaccggt gtggcgcgcc attgagaaag caacgctaat
    81121 cagcagaaca atcgccactt caaagaacag cggtagcgca cagaccagcc ccgcaaggcc
    81181 gatggcataa tgcgcgcggc tgtgaccgaa ggatttgagc attttgacgg caatctgatc
    81241 gactgcgccg gtttcatgta agatcttgcc aaacatagct cccagggcga caaccaccgc
    81301 caagaagccg agggtgcctc ccatcccttt ttccatcgtc gctgcgattt tatcgagcgg
    81361 cataccggaa aaaaggccag cccccatgga caccaccatt aaagccagga aagcgtgcat
    81421 acgcgccttc atgactaaaa acagcagcag taaaacagac cctactgctg ttaaaacaag
    81481 cgttaatgta gtcactactt atttgccttt tttaataacc tcaatggtgc ttgccacaac
    81541 accttccagc ggttgatcga tatccaccac cagtacatca gtttcgtccg cacccggctc
    81601 ctgcagcgtt tcaaactgcg tcaccaacat ttgggtttta aagaaatggc ctttgcgcgc
    81661 tttcaggcgg ctttcaatca cgtcaaaatc gcctttcagg tagatgaaag agagattcgg
    81721 attaccttca cgcagcaagt cgcgatagtg ttttttcaat gcagaacaga cgatcagtga
    81781 cactttatta gtgcgctgca tagcaaacgc ggcgtcgttc agcgcctgca accacggttt
    81841 gcgatcgtcg tcattcagcg gttcgccaga cgccattttt tcgatattgc gccgtggatg
    81901 gaggaaatcg ccatcaagaa acgcggcatg aagttgatgc gccacttcac tggcgaccgc
    81961 agatttgccg ctgcccgata cgcccatcaa gacgtaaatg tggtgatcat ggttagtcgt
    82021 gctcaaagtg gtgcccccac aatacaagaa ttaaaaatgt tacgggtaac tgttatcggt
    82081 aacattgtcc agccggacaa tatcagaagc aatatccatc cgtgccttaa gtgtataagt
    82141 gtgagctact tcaaatttgt aggcttaaat agatccgccc ggtgacaagg tgaaacctaa
    82201 atctaacatt ttcggtgtca cagattcgcc acgaatacgc gccagcaggc gttcagcgcc
    82261 aatactgccc atccgctcac gcggcgtcag cacgctcgct aaccgcggct ccatcacctg
    82321 gccaatgtca tgaccgtgga aaccggcaat cgccatatcg tcaggaacct tcaatcccag
    82381 acgctgacat tcaaacgccg cgccgaccgc caggtcatcg ttggtacaga acacgccatc
    82441 cagctgcgga tattcccgcc gcgcctggcg aatcagttca ataccggaag agtaagaaga
    82501 agattgctca accatcacgc tatacggcac cagacctgca tccagcatcg cctgttcgta
    82561 tcccttctgt ttgatgatag tacgttcgtc gagacgcgcg ccgagatagg caatgtggca
    82621 atgcccgcga gcaataatgg cggtggtcat ctggcgtgcc gcttcaaagt tatcaaaacc
    82681 gacggcgata tcgaggcacg gcgactggct gtccatgagt tccaccaccg ggatccccgc
    82741 cacttcaatc atctttaagg tgcgcggcgt gtgggtacgt tcggtgagga tcagtccgtc
    82801 gatattccat gagagcatgg attcgagacg ttcttgctcc atttccggtt tataaccgta
    82861 gtgagccagc atggtctgat aaccgtgcgc gtcggtgacg ctttcgattc cgcgtaatac
    82921 ttccgcgaaa acctggttgg tgagagaagg taacaggacg ccaatcgccc ggctggtggc
    82981 gttagagagg atatcgggcg cacgattggg aatatagccc agttcatcaa gagcggcggc
    83041 aatcttgccg cgtagagcga cggaaacctg ctccgggttg cgtaaaaaac ggctgaccgt
    83101 cattttggtc acgcctacac ggtcagccac atcctgaagt acgggtcttt tctttttcat
    83161 cgtcctgaag gtacaaaaga gatagattct cttagtttaa cacggacgca tcagaacctt
    83221 cccggggaaa acagtgcttg tttacaatta ttagatatac actaaatcaa ttgcatcgca
    83281 ttgtgctaac gacgcggcaa aaccccggaa gcgtgcatca gcacgcgacc ggagcgagcg
    83341 aggaagcctg caaaaaggca ggcttcaaag atgccgttga gttttaaacc ggcggcagat
    83401 cgaacagtaa cacttcgctg tcgctatccg catggatgga gattgcctgc tcatcccaga
    83461 ttgccagacc atcgctggtc gaggctttca cgccgttaat ggtgacattg cctttcacca
    83521 cctggatcca gacgcggcgt tcagcggcaa tctgatgcac cgactgctca tctttcagca
    83581 acgcccaacg atacagttcc atatcctgat gcactttcag cgaaccatct cgcgcatccg
    83641 gcgagagcac cagctgtttg ccctgcacgg catcgaagcg acgctgttca taacgcggcg
    83701 taatgccatt ttcttcaggc atgatccaga tctgatacag atgcagacgc tcggtgctgt
    83761 ttgggttgta ctctgagtga cgaatacccg tacccgcact cataatctgg aactcacccg
    83821 ccggaacctg ctctttattg cccatgctgt cctgatgctc aacagtacct tccagcacgt
    83881 aggtcaaaat ttccatatct ttatgcgggt gagtgccgaa gccctgccct gcttcaatca
    83941 cgtcgtcgtt aatcacgcgc agcgcggaga agcccataaa gttcggatcg taatagttgg
    84001 caaaagagaa agtatgccag gagtccagcc agccatgatt tgcatgacca cgttcatttg
    84061 ctttgcgtaa gtagatcatt tgtattcgcc ccctgaatga tttcgatggg cttagtgtgg
    84121 acccgatctg cctgggatga tagagggtga aaattgaccc ctctgttcaa aaaaattgaa
    84181 ctattcgagg ggccatcaaa cttacttagc gagagttact gtggagggag aggcttgctc
    84241 aaatccgcgt tcaaggattt ccagattggt aagaacttca gattccttga cgtaatttgg
    84301 cgcaccgtgg gtaatggttt gatacaacgc atcataaacg cgcccgtaat cgcccatctc
    84361 cggcttcatc tcttctctga ccgtcacgcc ctcgtcattg acatactcca gcacaccgac
    84421 cgaatcatcc gctgcgaatc ccggttcgcc cggcataata ttagccttca ggctggtttc
    84481 ctgctggtcg ataccgtatt taataaacga acctttctta ccgtgaacga taaatttcgg
    84541 ataatcgatt ttcaccagat ggctggtttt gacgatggct ttcaggtcgc cataaaacag
    84601 ttgcgcttca aaggtgtcgt caggattggc tttattacgc aggctgcgga tgtcataagc
    84661 gacgtgatcc gggcgaccga acagagaaat aatctggtcc atcgtatgca caccaaggcc
    84721 ataaaacgcg ccatcctgcg gcagcccagg tttggtctct gccaccgggc ggtaatagtc
    84781 aaaatggctt tccacttcaa caatctctcc caacttgcca ctttcaatcg cttttttcgc
    84841 tgtcaggaag caggagtcaa agcgacgatt ctgatacggc gtgacggtca gccctttgct
    84901 tttcgccaac gcaaacagct ccttcgcctg ggcaagcgtc ggggtgaacg gtttttcgac
    84961 cagcacattt ttcccggctt ccagcgcgcg tttcgcgtac tcgaaatggc tgtccgcgtg
    85021 ggtgcagaca acaaccagct taacatcggg atcgtttagt acttcgtcga gatcgctggt
    85081 gaaatggata tgggaataaa tgggagcctg ttcttccggc ttcgcatggc gacgaaaaat
    85141 atgcgcgaca tgccagctat ccttgcggtt aagtacatac ggcagatggt aacgggtggt
    85201 gcttttgccg aagccaataa aggcgcagtt gatgaccatg atttcgtcct ttttaaggtg
    85261 gttatttaca ccttagcgca aagcggacgt ggttcctact ggagtgcgca taacgaacac
    85321 aagcactccc gtggataaat tgagaacgaa agatcaaaaa aaagccagca cccggctggc
    85381 taagtaatac tggaagcaat gtgagcaatg tcgtgctttc aggttctccg cgagggtctt
    85441 cctgatcgcg agacaataat aatcattctc attcgcactt gtccaacact ttttgcaaaa
    85501 aaatgcattt gactcgcatt tgaaagtcaa tgatgttgaa agggacattt accccaaaga
    85561 ggacaaagga atgagtgaga tagtaatacg ccacgcagaa acacgggatt acgaggccat
    85621 caggcagatt cacgcccagc cggaggtgta ttgcaacaca ctacaggtgc ctcatccttc
    85681 cgatcatatg tggcaggagc gactcgccga tcgtcccggc atcaagcaac tcgtcgcctg
    85741 tattgatgga gacgtcgtgg gccatctcac cattgacgtg caacagcgcc cacgccgcag
    85801 tcatgttgcc gattttggta tctgtgtcga ctctcgttgg aagaaccgcg gcgtcgccag
    85861 cgccctgatg cgagagatga ttgaaatgtg cgacaactgg ttgcgggtag atcgcattga
    85921 actaaccgtg tttgtcgata acgccccggc aattaaggtc tataaaaaat acggctttga
    85981 aattgaaggg actggtaaga agtacgcatt gcgtaatggt gaatatgtcg atgcatatta
    86041 tatggcgcgg gtgaagtaag atagtgccct ttttctgaga tggaaaaagg gtgtcattca
    86101 aaatcgacat accttccttt aaggtattta tttgccca
//
LOCUS       DAPGWB010000003        73384 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.003, whole genome shotgun sequence.
ACCESSION   DAPGWB010000003 DAPGWB010000000
VERSION     DAPGWB010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 73384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 73384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..73384
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.003"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(29..105)
                     /locus_tag="RHX79_000158"
     tRNA            complement(29..105)
                     /locus_tag="RHX79_000158"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(69..71),aa:Arg,seq:acg)
     gene            complement(169..245)
                     /locus_tag="RHX79_000159"
     tRNA            complement(169..245)
                     /locus_tag="RHX79_000159"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(209..211),aa:Arg,seq:acg)
     gene            complement(443..519)
                     /locus_tag="RHX79_000160"
     tRNA            complement(443..519)
                     /locus_tag="RHX79_000160"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(483..485),aa:Arg,seq:acg)
     gene            complement(523..615)
                     /locus_tag="RHX79_000161"
     tRNA            complement(523..615)
                     /locus_tag="RHX79_000161"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(579..581),aa:Ser,seq:gct)
     gene            complement(931..1116)
                     /gene="csrA"
                     /locus_tag="RHX79_000162"
     CDS             complement(931..1116)
                     /gene="csrA"
                     /locus_tag="RHX79_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDV2195380.1"
                     /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
                     EEIYQRIQAEKSQQSSY"
     gene            complement(1351..3981)
                     /gene="alaS"
                     /locus_tag="RHX79_000163"
     CDS             complement(1351..3981)
                     /gene="alaS"
                     /locus_tag="RHX79_000163"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDV2195381.1"
                     /translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGM
                     NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
                     FKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDN
                     KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
                     FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDL
                     SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
                     VGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDG
                     ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI
                     RVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGD
                     KGELKGANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSA
                     THLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL
                     PIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI
                     ISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTR
                     QLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLG
                     STIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
                     AAALPAALASVKGWVSAKLQ"
     gene            complement(4109..4609)
                     /gene="recX"
                     /locus_tag="RHX79_000164"
     CDS             complement(4109..4609)
                     /gene="recX"
                     /locus_tag="RHX79_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HDV2195382.1"
                     /translation="MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKN
                     GPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGIS
                     REATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI
                     WRNFAD"
     gene            complement(4852..5913)
                     /gene="recA"
                     /locus_tag="RHX79_000165"
     CDS             complement(4852..5913)
                     /gene="recA"
                     /locus_tag="RHX79_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDV2195383.1"
                     /translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG
                     SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP
                     IYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
                     GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
                     YASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV
                     DLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNS
                     TPDFSVDDSEGVAETNEDF"
     gene            complement(5993..6490)
                     /gene="pncC"
                     /locus_tag="RHX79_000166"
     CDS             complement(5993..6490)
                     /gene="pncC"
                     /locus_tag="RHX79_000166"
                     /EC_number="3.5.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidase"
                     /protein_id="HDV2195384.1"
                     /translation="MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAG
                     SSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSI
                     SGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQ
                     FLQNT"
     gene            complement(6635..7720)
                     /gene="mltB"
                     /locus_tag="RHX79_000167"
     CDS             complement(6635..7720)
                     /gene="mltB"
                     /locus_tag="RHX79_000167"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HDV2195385.1"
                     /translation="MFKRRYVTLLPLFVLLAACSSKPKPTETDTTTGTPSGGFLLEPQ
                     HNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTT
                     SVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIG
                     VETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFA
                     GAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMAN
                     GQAPGLPNGFKTKYSISQLAAAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYT
                     ITRYNHSTHYAMAVWQLGQAVALARVQ"
     gene            7976..8539
                     /gene="srlA"
                     /locus_tag="RHX79_000168"
                     /gene_synonym="gutA"
     CDS             7976..8539
                     /gene="srlA"
                     /locus_tag="RHX79_000168"
                     /gene_synonym="gutA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HDV2195386.1"
                     /translation="MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNAL
                     INFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWV
                     TDLTTAIFEKKMGIQLEQKVHLAGATS"
     gene            8536..9495
                     /gene="srlE"
                     /locus_tag="RHX79_000169"
                     /gene_synonym="gutE"
     CDS             8536..9495
                     /gene="srlE"
                     /locus_tag="RHX79_000169"
                     /gene_synonym="gutE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HDV2195387.1"
                     /translation="MTHIRIEKGTGGWGGPLELKATPGKKIVYITAGTRPAIVDKLAQ
                     LTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
                     IVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVA
                     VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLA
                     LICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPV
                     GLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ"
     gene            9506..9877
                     /gene="srlB"
                     /locus_tag="RHX79_000170"
                     /gene_synonym="gutB"
     CDS             9506..9877
                     /gene="srlB"
                     /locus_tag="RHX79_000170"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HDV2195388.1"
                     /translation="MTVIYQTTITRIGASAIDALSDQMLITFREGAPADLEEYCFIHC
                     HGELKGALHPGLQFSLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHV
                     AGPVPDDIAPGSVLKFESVKE"
     gene            9881..10660
                     /gene="srlD"
                     /locus_tag="RHX79_000171"
     CDS             9881..10660
                     /gene="srlD"
                     /locus_tag="RHX79_000171"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HDV2195389.1"
                     /translation="MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQ
                     EINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
                     GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
                     GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDK
                     VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
     gene            10765..11124
                     /gene="gutM"
                     /locus_tag="RHX79_000172"
     CDS             10765..11124
                     /gene="gutM"
                     /locus_tag="RHX79_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HDV2195390.1"
                     /translation="MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGR
                     SSGRFKPRVVVAIALDDQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPH
                     DPLSQNALSLALKLKRG"
     gene            11191..11964
                     /gene="srlR"
                     /locus_tag="RHX79_000173"
                     /gene_synonym="gutR"
     CDS             11191..11964
                     /gene="srlR"
                     /locus_tag="RHX79_000173"
                     /gene_synonym="gutR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucitol operon DNA-binding transcriptional
                     repressor SrlR"
                     /protein_id="HDV2195391.1"
                     /translation="MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
                     HAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGST
                     VLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENA
                     FEHFSFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
                     VCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE"
     gene            11957..12922
                     /gene="gutQ"
                     /locus_tag="RHX79_000174"
     CDS             11957..12922
                     /gene="gutQ"
                     /locus_tag="RHX79_000174"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311591.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase GutQ"
                     /protein_id="HDV2195392.1"
                     /translation="MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGK
                     VVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGA
                     KELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT
                     LMMGDALAMAVMQTRGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASV
                     MDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTL
                     QAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII"
     gene            complement(12919..14433)
                     /gene="norR"
                     /locus_tag="RHX79_000175"
     CDS             complement(12919..14433)
                     /gene="norR"
                     /locus_tag="RHX79_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311592.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide reductase transcriptional regulator
                     NorR"
                     /protein_id="HDV2195393.1"
                     /translation="MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALL
                     RYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLI
                     PGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNA
                     LLIEQLESQNMLPGDAAPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETG
                     TGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFE
                     MADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREE
                     VLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGAR
                     NLLQHYRFPGNVRELEHAIHRAVVLARATRSGDEVILEAQHFAFPEVTLPPPEAAAVP
                     VVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD"
     gene            14620..16059
                     /gene="norV"
                     /locus_tag="RHX79_000176"
     CDS             14620..16059
                     /gene="norV"
                     /locus_tag="RHX79_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic nitric oxide reductase
                     flavorubredoxin"
                     /protein_id="HDV2195394.1"
                     /translation="MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
                     NVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYC
                     TANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDA
                     VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
                     PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI
                     AETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
                     FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDQDALELCREHGREI
                     ARQWALAPLPQSTVNTVVKEETSATTTADLGPRMQCSVCQWIYDPAKGEPMQDVAPGT
                     PWSEVPDNFLCPECSLGKDVFDELASEAK"
     gene            16056..17189
                     /gene="norW"
                     /locus_tag="RHX79_000177"
     CDS             16056..17189
                     /gene="norW"
                     /locus_tag="RHX79_000177"
                     /EC_number="1.18.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavorubredoxin reductase NorW"
                     /protein_id="HDV2195395.1"
                     /translation="MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKP
                     DLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQWQYDK
                     LVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDF
                     CRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILA
                     TLDRQRSIEVDAVIAATGLRPETALARRAGLTINRGVCVDSYLQTSNADIYALGDCAE
                     INGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPAMLVKIKTPELPLHLAGETQRQDLR
                     WQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFGLLKTLPM"
     gene            complement(17415..19667)
                     /gene="hypF"
                     /locus_tag="RHX79_000178"
     CDS             complement(17415..19667)
                     /gene="hypF"
                     /locus_tag="RHX79_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HDV2195396.1"
                     /translation="MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD
                     GVEVRLLEDPETFLVQLHQHCPPLARIDSVEREPYIWSQLPTEFTIRQSTGGTMNTQI
                     VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
                     ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAI
                     KGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIV
                     LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN
                     EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALVLPPGFKNVP
                     PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVV
                     HDVHPGYVSSQWASEMNMPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE
                     NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAATQPWRNLLAQCLRFVPEWQNYSE
                     TASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEA
                     LAASCHGVTHPVTMPLVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMRE
                     QATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA
                     RWLAGEVQNG"
     gene            complement(19820..20347)
                     /gene="hydN"
                     /locus_tag="RHX79_000179"
     CDS             complement(19820..20347)
                     /gene="hydN"
                     /locus_tag="RHX79_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport protein HydN"
                     /protein_id="HDV2195397.1"
                     /translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
                     HVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
                     AMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKL
                     EQLSAEKRRRTALMF"
     gene            complement(20496..21506)
                     /gene="ascG"
                     /locus_tag="RHX79_000180"
     CDS             complement(20496..21506)
                     /gene="ascG"
                     /locus_tag="RHX79_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator AscG"
                     /protein_id="HDV2195398.1"
                     /translation="MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESG
                     YRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS
                     AEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVW
                     CDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIA
                     NGKWTPASGAEGVEMLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFD
                     DIAIAPYTVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIAL
                     SR"
     gene            21766..23223
                     /gene="ascF"
                     /locus_tag="RHX79_000181"
     CDS             21766..23223
                     /gene="ascF"
                     /locus_tag="RHX79_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose/arbutin/salicin transporter
                     subunit IIBC"
                     /protein_id="HDV2195399.1"
                     /translation="MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDQLIDS
                     PTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRI
                     GAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFF
                     LPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYT
                     YTVIPALVMTWCLSYIERWVDRITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGS
                     AISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSE
                     IGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIAS
                     LISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFIL
                     TLLLGFEDIPVEEAAAEARKHQSVQPTVAKEVSLN"
     gene            23232..24656
                     /gene="ascB"
                     /locus_tag="RHX79_000182"
     CDS             23232..24656
                     /gene="ascB"
                     /locus_tag="RHX79_000182"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase AscB"
                     /protein_id="HDV2195400.1"
                     /translation="MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMA
                     VKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGD
                     ELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVELFSRY
                     ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASA
                     LATKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPA
                     YSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSL
                     RNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDELAANGEINDDYR
                     ISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGT
                     LTRTRKKSFWWYKKVIASNGEDLE"
     gene            complement(24770..25189)
                     /locus_tag="RHX79_000183"
     CDS             complement(24770..25189)
                     /locus_tag="RHX79_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001696729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2195401.1"
                     /translation="MTANAARAVKATRELVNAVPFLGGSDSEDDYREALELVEYLIEE
                     DDTNPLIDFLASRIAEYENNNEKFAEFDKAVAAMPVGVALLRTLIDQHNLTYADLKNE
                     IGSKSLVSQILSGQRSLTISHIKALSARFGVKPEWFL"
     gene            complement(25260..26015)
                     /locus_tag="RHX79_000184"
     CDS             complement(25260..26015)
                     /locus_tag="RHX79_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001374644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195402.1"
                     /translation="MCAFLLSLVLPAQATSFTEYLPMSDSEYAQKRALKPLLTMPYDA
                     EQNWHFRKVGVAGVTLEKMPNDDSEWQLNGKDRAGKSWSVPVGGLQNMAGNAQLYRAD
                     LDRNGIQDLVIWRGISGNGLAPNAFLILMTFNQQGRPCVFQSDGFYTASETGIDDLLD
                     LQRNGHTQLLDMQFDSGYWITSLYQVKDAKWQRVHGWFGKLSYPALTRFTYTPNRKLV
                     LKPIAGRDPQTEDLAQTQRCLIKGDVLYGVNQN"
     gene            complement(26058..26528)
                     /gene="hycI"
                     /locus_tag="RHX79_000185"
     CDS             complement(26058..26528)
                     /gene="hycI"
                     /locus_tag="RHX79_000185"
                     /EC_number="3.4.23.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation peptidase HycI"
                     /protein_id="HDV2195403.1"
                     /translation="MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE
                     NDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLK
                     EDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEVE"
     gene            complement(26521..26931)
                     /gene="hycH"
                     /locus_tag="RHX79_000186"
     CDS             complement(26521..26931)
                     /gene="hycH"
                     /locus_tag="RHX79_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase assembly protein HycH"
                     /protein_id="HDV2195404.1"
                     /translation="MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
                     LEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAA
                     QTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD"
     gene            complement(26928..27695)
                     /gene="hycG"
                     /locus_tag="RHX79_000187"
     CDS             complement(26928..27695)
                     /gene="hycG"
                     /locus_tag="RHX79_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycG"
                     /protein_id="HDV2195405.1"
                     /translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVD
                     CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQS
                     APDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
                     GLLEQKIHARGPGEQDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDFLTQ
                     LGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR"
     gene            complement(27695..28237)
                     /gene="hycF"
                     /locus_tag="RHX79_000188"
     CDS             complement(27695..28237)
                     /gene="hycF"
                     /locus_tag="RHX79_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycF"
                     /protein_id="HDV2195406.1"
                     /translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCA
                     ACVNACPSNALTVEADLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
                     KEDFLQQSRFVLCSCRVCNRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKR
                     QKCLVPSDRIELTRHMKEAI"
     gene            complement(28247..29956)
                     /gene="hycE"
                     /locus_tag="RHX79_000189"
     CDS             complement(28247..29956)
                     /gene="hycE"
                     /locus_tag="RHX79_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycE"
                     /protein_id="HDV2195407.1"
                     /translation="MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPE
                     VVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYP
                     SVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
                     PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
                     GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
                     EVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
                     RDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGP
                     MVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLD
                     NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT
                     LRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS
                     PLK"
     gene            complement(29974..30897)
                     /gene="hycD"
                     /locus_tag="RHX79_000190"
     CDS             complement(29974..30897)
                     /gene="hycD"
                     /locus_tag="RHX79_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycD"
                     /protein_id="HDV2195408.1"
                     /translation="MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
                     DIFKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLY
                     LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI
                     TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG
                     VMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFEN
                     SMARLRLDITPRITWAGFGFAFLAFVSLLAA"
     gene            complement(30900..32726)
                     /gene="hycC"
                     /locus_tag="RHX79_000191"
     CDS             complement(30900..32726)
                     /gene="hycC"
                     /locus_tag="RHX79_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit 3"
                     /protein_id="HDV2195409.1"
                     /translation="MSAISLINSGVAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSL
                     YTAAAGFTVLTGAVGVSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHA
                     QVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEVMALCAVFLTSNSKEGKLWFALGRL
                     GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWV
                     PQAHANASAPAAALFSTVVMKIGLLGMLTLSLLGGNAPLWWGIALLVLGMITAFVGGL
                     YALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSL
                     FKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEW
                     VIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAEN
                     ATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLI
                     ACPLLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKL
                     RKWLNPVSLVPGWQCEGSALLFRRMALVELAVLVVIIVSRGA"
     gene            complement(32723..33334)
                     /gene="hycB"
                     /locus_tag="RHX79_000192"
     CDS             complement(32723..33334)
                     /gene="hycB"
                     /locus_tag="RHX79_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycB"
                     /protein_id="HDV2195410.1"
                     /translation="MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEK
                     ESAPQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGS
                     RPLDIPANANTPKAPPAPPAPARISTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCP
                     TKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK"
     gene            complement(33459..33920)
                     /gene="hycA"
                     /locus_tag="RHX79_000193"
     CDS             complement(33459..33920)
                     /gene="hycA"
                     /locus_tag="RHX79_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase regulator HycA"
                     /protein_id="HDV2195411.1"
                     /translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
                     AMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKDGEDKQRIAQAQLSIDGM
                     IDGKVNIRDREQVLEHYLEKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA"
     gene            34132..34482
                     /gene="hypA"
                     /locus_tag="RHX79_000194"
     CDS             34132..34482
                     /gene="hypA"
                     /locus_tag="RHX79_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HDV2195412.1"
                     /translation="MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSL
                     AFCFDLVCRGSVAEGCKLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVA
                     DDGLQIRRIEIDQE"
     gene            34486..35358
                     /gene="hypB"
                     /locus_tag="RHX79_000195"
     CDS             34486..35358
                     /gene="hypB"
                     /locus_tag="RHX79_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HDV2195413.1"
                     /translation="MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIK
                     APEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR
                     KQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQV
                     NTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
                     EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEG
                     MDQWLNWLETQRCA"
     gene            35349..35621
                     /gene="hypC"
                     /locus_tag="RHX79_000196"
     CDS             35349..35621
                     /gene="hypC"
                     /locus_tag="RHX79_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 3 maturation protein HypC"
                     /protein_id="HDV2195414.1"
                     /translation="MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRV
                     GQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK"
     gene            35621..36742
                     /gene="hypD"
                     /locus_tag="RHX79_000197"
     CDS             35621..36742
                     /gene="hypD"
                     /locus_tag="RHX79_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HDV2195415.1"
                     /translation="MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGH
                     THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRV
                     PGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQ
                     AKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDF
                     HRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCV
                     NGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPH
                     QCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA"
     gene            36739..37749
                     /gene="hypE"
                     /locus_tag="RHX79_000198"
     CDS             36739..37749
                     /gene="hypE"
                     /locus_tag="RHX79_000198"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417210.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation carbamoyl dehydratase
                     HypE"
                     /protein_id="HDV2195416.1"
                     /translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA
                     QLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEE
                     GLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWG
                     AQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKA
                     LRDATRGGVNAVVHEFAAACGCGIEISEAALPVKPAVRGVCELLGLDALNFANEGKLV
                     IAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
                     IC"
     gene            37823..39901
                     /gene="flhA"
                     /locus_tag="RHX79_000199"
     CDS             37823..39901
                     /gene="flhA"
                     /locus_tag="RHX79_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase transcriptional activator
                     FlhA"
                     /protein_id="HDV2195417.1"
                     /translation="MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALA
                     DNAAIVLWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFC
                     ETWPQLAAGGLYPKFGHYCLMPLAAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIV
                     SVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYF
                     DIDDISIVLRSHRKNKLNIYSTHYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINL
                     HERDDLAPYERMLFDTWGNQIQTLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLR
                     QIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVL
                     KQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDL
                     FGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSN
                     KIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAF
                     TFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDI
                     VLPEPETPPAATVVAQEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMK
                     RLGIDKSALI"
     gene            complement(39938..40291)
                     /locus_tag="RHX79_000200"
     CDS             complement(39938..40291)
                     /locus_tag="RHX79_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide-stimulated promoter family
                     protein"
                     /protein_id="HDV2195418.1"
                     /translation="MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKR
                     LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRP
                     VPELPEKYRPKKTRE"
     gene            complement(40368..40502)
                     /locus_tag="RHX79_000201"
     CDS             complement(40368..40502)
                     /locus_tag="RHX79_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195419.1"
                     /translation="MIPELIISGEEANGEFLMLVPGKMLFCSFCVMLMKQVRKIASVE
                     "
     gene            40578..43139
                     /gene="mutS"
                     /locus_tag="RHX79_000202"
     CDS             40578..43139
                     /gene="mutS"
                     /locus_tag="RHX79_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDV2195420.1"
                     /translation="MSAIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDA
                     KRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATS
                     KGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP
                     ADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFG
                     TRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRN
                     LEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDF
                     TAELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQA
                     LREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL
                     EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKE
                     YEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLN
                     YTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYM
                     RQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILH
                     NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKME
                     GVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
                     ISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV"
     gene            43245..43901
                     /gene="pphB"
                     /locus_tag="RHX79_000203"
     CDS             43245..43901
                     /gene="pphB"
                     /locus_tag="RHX79_000203"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HDV2195421.1"
                     /translation="MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFFPETD
                     LLISVGDNIDRGPESLDVLRLLNQPWFISVKGNHEAMALDAFATGDGNMWLASGGDWF
                     FDLNDSEQQEAIDLLLKFHHLPHIIEITNDIIKYVIAHADYPGSEYLFGKEIAESELL
                     WPVDRVQKSLNGELQQINGADYFIFGHMMFDNIQTFANQIYIDTGSPKSGRLSFYKIR
                     "
     gene            complement(43952..44719)
                     /locus_tag="RHX79_000204"
     CDS             complement(43952..44719)
                     /locus_tag="RHX79_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417215.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDV2195422.1"
                     /translation="MIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLE
                     QQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGT
                     TTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATM
                     LRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWL
                     ALPLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE"
     gene            44915..45823
                     /locus_tag="RHX79_000205"
     CDS             44915..45823
                     /locus_tag="RHX79_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDV2195423.1"
                     /translation="MKTGSEFHVGIVGLGSMGMGAALSCVRAGLSTWGADLNSNACAT
                     LKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSST
                     IASADAQEIATALAGFDLEMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAV
                     AGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAG
                     NSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSAS
                     NAGYGKEDDSAVIKIFSGITLPGAKS"
     gene            45820..47082
                     /locus_tag="RHX79_000206"
     CDS             45820..47082
                     /locus_tag="RHX79_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxo-tetronate kinase"
                     /protein_id="HDV2195424.1"
                     /translation="MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAID
                     ALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDAL
                     MDALDTPFTVFSPALPVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEA
                     QSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPL
                     VTGGSGLAIGLARQWAQENGNQAREAGHPLAGRGVVLSGSCSQMTNRQVAHYRQIAPA
                     REVDVARCLSTETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKAS
                     QAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPGVPWVNAL
                     DKPVSLALKSGNFGDEAFFSRAQREFLS"
     gene            47079..47717
                     /locus_tag="RHX79_000207"
     CDS             47079..47717
                     /locus_tag="RHX79_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HDV2195425.1"
                     /translation="MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNL
                     LATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHST
                     WSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAF
                     LLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS"
     gene            47722..48498
                     /locus_tag="RHX79_000208"
     CDS             47722..48498
                     /locus_tag="RHX79_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HDV2195426.1"
                     /translation="MPRFAANLSMMFTEVPFIERFAAARKAGFDAVEFLFPYDYSTLQ
                     IQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQV
                     HVMAGVVPAGEDAERYRAVFIDNLRYAADRFALHGKRILVEALSPDVKPHYLFSSQYQ
                     ALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGE
                     INYPWLFRLFDEVGYQGWIGCEYKPRGLTEEGLGWFDAWR"
     gene            48587..49951
                     /locus_tag="RHX79_000209"
     CDS             48587..49951
                     /locus_tag="RHX79_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family transporter"
                     /protein_id="HDV2195427.1"
                     /translation="MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAG
                     IPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTI
                     AALTLAAFFLGIPVFFDVGFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP
                     HPGPVAAAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINTRQYAMSVEVLEQMQLA
                     PASEEGATKLSDKINPPGVALVTSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGS
                     PMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVES
                     GVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQC
                     VLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCV
                     WAVI"
     gene            complement(49990..50226)
                     /locus_tag="RHX79_000210"
     CDS             complement(49990..50226)
                     /locus_tag="RHX79_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195428.1"
                     /translation="MICPRCADEQIEVMAKSPVKDVWTVYQCQHCLYTWRDTEPLRRT
                     SREHYPEAFRMTQKDIDDAPMVPSIPPLLVEGKR"
     gene            complement(50237..51664)
                     /locus_tag="RHX79_000211"
     CDS             complement(50237..51664)
                     /locus_tag="RHX79_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HDV2195429.1"
                     /translation="MAFDDLRSFLQELDDHGQLLKISEEVNAEPDLAAAANATGRIGD
                     GAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLPPNAPVKKQIDEFIRRWDNFPIA
                     PERRANPAWAQNTVDGDEINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQ
                     NVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATP
                     LKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFT
                     GHYSGGRNMTVVRIDKVSYRTRPIFESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFP
                     EVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFN
                     LPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHY
                     SQPVVDLPETKAWAEKLTAMLAARK"
     gene            complement(51664..52257)
                     /locus_tag="RHX79_000212"
     CDS             complement(51664..52257)
                     /locus_tag="RHX79_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDV2195430.1"
                     /translation="MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIE
                     LETPYSARDVAALADFSHNPADQAAIISSGSFRTDGMIVIPCSMKTLAGIRAGYADGL
                     VGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDD
                     IVHHVVARVLDQFGLEHPHARRWQGLPQARNFSQENE"
     gene            52404..52811
                     /locus_tag="RHX79_000213"
     CDS             52404..52811
                     /locus_tag="RHX79_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001208089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDV2195431.1"
                     /translation="MALRNKAFHQLRQLFQQHTARWQHELPDLTKPQYAVMRAIADKP
                     GIEQVALIEAAVSTKATLAEMLARMENRGLVRREHDSADKRRRFVWLTAEGEKVLAAA
                     IPIGDSVDEEFLGRLSGEEQELFMQLVRKMMNA"
     gene            complement(52932..53924)
                     /gene="rpoS"
                     /locus_tag="RHX79_000214"
     CDS             complement(52932..53924)
                     /gene="rpoS"
                     /locus_tag="RHX79_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000081498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoS"
                     /protein_id="HDV2195432.1"
                     /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEE
                     LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
                     VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
                     QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
                     ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
                     RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
     gene            complement(53987..55126)
                     /gene="nlpD"
                     /locus_tag="RHX79_000215"
     CDS             complement(53987..55126)
                     /gene="nlpD"
                     /locus_tag="RHX79_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator NlpD"
                     /protein_id="HDV2195433.1"
                     /translation="MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAP
                     ANTNSGMLITPPPKMGTTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENG
                     RIVYNRQYGNIPKGSYSGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVG
                     QTLQVGNASGTPITGGNAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSA
                     NKMLPNNKPTATTVTAPVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASE
                     GGNKGIDIAGSKGQAIIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLV
                     REQQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR"
     gene            complement(55266..55892)
                     /gene="pcm"
                     /locus_tag="RHX79_000216"
     CDS             complement(55266..55892)
                     /gene="pcm"
                     /locus_tag="RHX79_000216"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HDV2195434.1"
                     /translation="MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKA
                     WDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCS
                     VERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMT
                     QLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA"
     gene            complement(55886..56647)
                     /gene="surE"
                     /locus_tag="RHX79_000217"
     CDS             complement(55886..56647)
                     /gene="surE"
                     /locus_tag="RHX79_000217"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDV2195435.1"
                     /translation="MRILLSNDDGVHAPGIQTLAKTLREFADVQVVAPDRNRSGASNS
                     LTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
                     YSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV
                     PDLPLDQIKGIRVTRCGSRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPDTDFAAVD
                     EGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW"
     gene            complement(56628..57677)
                     /gene="truD"
                     /locus_tag="RHX79_000218"
     CDS             complement(56628..57677)
                     /gene="truD"
                     /locus_tag="RHX79_000218"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDV2195436.1"
                     /translation="MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHI
                     LVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLS
                     AFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYF
                     GAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQ
                     VVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQ
                     AAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVV
                     RELINTTGDYAHIAE"
     gene            complement(57674..58153)
                     /gene="ispF"
                     /locus_tag="RHX79_000219"
     CDS             complement(57674..58153)
                     /gene="ispF"
                     /locus_tag="RHX79_000219"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HDV2195437.1"
                     /translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
                     TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA
                     PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK"
     gene            complement(58153..58863)
                     /gene="ispD"
                     /locus_tag="RHX79_000220"
     CDS             complement(58153..58863)
                     /gene="ispD"
                     /locus_tag="RHX79_000220"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HDV2195438.1"
                     /translation="MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHA
                     LLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWV
                     LVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGL
                     WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPE
                     DLALAEFYLTRTIHQENT"
     gene            complement(58882..59193)
                     /gene="ftsB"
                     /locus_tag="RHX79_000221"
     CDS             complement(58882..59193)
                     /gene="ftsB"
                     /locus_tag="RHX79_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HDV2195439.1"
                     /translation="MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNA
                     KLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNN
                     R"
     gene            complement(59387..59710)
                     /locus_tag="RHX79_000222"
     CDS             complement(59387..59710)
                     /locus_tag="RHX79_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3561 family protein"
                     /protein_id="HDV2195440.1"
                     /translation="MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPML
                     IYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALF
                     MWLLG"
     gene            complement(59760..60365)
                     /gene="cysC"
                     /locus_tag="RHX79_000223"
     CDS             complement(59760..60365)
                     /gene="cysC"
                     /locus_tag="RHX79_000223"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HDV2195441.1"
                     /translation="MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTV
                     AGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLV
                     VLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT
                     GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS"
     gene            complement(60365..61792)
                     /gene="cysN"
                     /locus_tag="RHX79_000224"
     CDS             complement(60365..61792)
                     /gene="cysN"
                     /locus_tag="RHX79_000224"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HDV2195442.1"
                     /translation="MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
                     GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
                     STEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGI
                     KHLVVAINKMDLVDYSEETFTRIREDYLTFAEQLPGNLDIRFVPLSALEGDNVASQSE
                     SMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQ
                     RVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAV
                     QSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNG
                     IGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSA
                     FELELNALVRRHFPHWGARDLLGDK"
     gene            complement(61794..62702)
                     /gene="cysD"
                     /locus_tag="RHX79_000225"
     CDS             complement(61794..62702)
                     /gene="cysD"
                     /locus_tag="RHX79_000225"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HDV2195443.1"
                     /translation="MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVML
                     HLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINP
                     FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
                     KNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE
                     RDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVST
                     TSERQGRVIDRDQAGSMELKKRQGYF"
     gene            62954..63991
                     /gene="iap"
                     /locus_tag="RHX79_000226"
     CDS             62954..63991
                     /gene="iap"
                     /locus_tag="RHX79_000226"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase isozyme conversion
                     aminopeptidase"
                     /protein_id="HDV2195444.1"
                     /translation="MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFF
                     PGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIA
                     AHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKN
                     TPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGV
                     KTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSV
                     EATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIM
                     LPLVKELAKAS"
     repeat_region   64073..64771
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=64134..64162
                     /rpt_unit_seq="cggtttatccccgctggcgcggggaacac"
     gene            complement(64868..65161)
                     /gene="cas2"
                     /locus_tag="RHX79_000227"
     CDS             complement(64868..65161)
                     /gene="cas2"
                     /locus_tag="RHX79_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endoribonuclease
                     Cas2"
                     /protein_id="HDV2195445.1"
                     /translation="MSMIVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIW
                     QQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ"
     gene            complement(65158..66081)
                     /gene="cas1e"
                     /locus_tag="RHX79_000228"
     CDS             complement(65158..66081)
                     /gene="cas1e"
                     /locus_tag="RHX79_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endonuclease Cas1"
                     /protein_id="HDV2195446.1"
                     /translation="MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHI
                     PVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQ
                     AKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKW
                     NGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYD
                     IADIIKFDLVVPKAFEIAARQPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGE
                     IEPPQPAPDMLPPAIPEPETLGDSGHRGRGG"
     gene            complement(66078..66728)
                     /gene="cas6e"
                     /locus_tag="RHX79_000229"
     CDS             complement(66078..66728)
                     /gene="cas6e"
                     /locus_tag="RHX79_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas6/Cse3/CasE"
                     /protein_id="HDV2195447.1"
                     /translation="MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQ
                     FLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELCTGQQLCFNLRANPTICKA
                     GKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALGWLAAQGERSGFTLLDTSVDAYRQQQ
                     LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA"
     gene            complement(66710..67456)
                     /gene="cas5e"
                     /locus_tag="RHX79_000230"
     CDS             complement(66710..67456)
                     /gene="cas5e"
                     /locus_tag="RHX79_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cas5/CasD"
                     /protein_id="HDV2195448.1"
                     /translation="MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGV
                     GIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPE
                     LLSAIISRRDYYTDAWWMVAVATTTDAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPL
                     APLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDV
                     PLNRQQWLFGERTVNQGPWLSKEEPCTSQE"
     gene            complement(67467..68522)
                     /gene="cas7e"
                     /locus_tag="RHX79_000231"
     CDS             complement(67467..68522)
                     /gene="cas7e"
                     /locus_tag="RHX79_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas7/Cse4/CasC"
                     /protein_id="HDV2195449.1"
                     /translation="MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSL
                     KRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAK
                     NDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVD
                     IAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGE
                     TGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAY
                     ASWALAEKGTDQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTDYASFD
                     VMNKQGSMKDVLDFICA"
     gene            complement(68534..69070)
                     /gene="casB"
                     /locus_tag="RHX79_000232"
     CDS             complement(68534..69070)
                     /gene="casB"
                     /locus_tag="RHX79_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse2/CasB"
                     /protein_id="HDV2195450.1"
                     /translation="MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGF
                     RLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLS
                     AVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRI
                     RWALEYYQAGDADNEQNQ"
     gene            complement(69067..70629)
                     /gene="casA"
                     /locus_tag="RHX79_000233"
     CDS             complement(69067..70629)
                     /gene="casA"
                     /locus_tag="RHX79_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse1/CasA"
                     /protein_id="HDV2195451.1"
                     /translation="MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADL
                     QGAAWQFLLGLLQTSFAPKNHGRWDDIWQDGLEAEKLREALLSLEHAFQFGADSPSFM
                     QDFEALKGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCPHCSALALFSLQLNA
                     PSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWPNVMPQDEADLPLPKKFDD
                     LVFPWLGPTRTSELAGAVVTHDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDA
                     LLSLMTTKNYGANYAMWQHPLTPYRIPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKS
                     ENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLKKKEGQIP
                     KLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIE
                     EGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSA
                     KAAREKKQEAAE"
     gene            complement(70727..73384)
                     /locus_tag="RHX79_000234"
     CDS             complement(70727..73384)
                     /locus_tag="RHX79_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001674509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated helicase/endonuclease Cas3"
                     /protein_id="HDV2195452.1"
                     /translation="MTFFDFWGKTRRGEKDGGDDYHLLCWHSLDIAAMGYLMVKRNCF
                     GLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEK
                     ISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELD
                     NFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGS
                     STRFFPRVAHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQ
                     QKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANA
                     MYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGC
                     AAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYM
                     SCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGLQEAPFLEKDDYPWL
                     THVTKSDVNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDA
                     IKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCKQ
                     VIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILA
                     PVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGE
                     DVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESV
                     SLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRLWCIEQRQ
                     DPEMANVILVNDDESCGYSATEGLIGKVG"
BASE COUNT        17281 a        20101 c        18856 g        17146 t
ORIGIN      
        1 ccttcattgc tgaagatttc ggagaatatg gtgcatccgg gaggattcga acctccgacc
       61 gctcggttcg tagccgagta ctctatccag ctgagctacg gatgcatcgg gaaaatttat
      121 tttactgctg atattgatat cgctactaaa gccatatcaa gtaagagatg gtgcatccgg
      181 gaggattcga acctccgacc gctcggttcg tagccgagta ctctatccag ctgagctacg
      241 gatgcatcgg gaaacttact ttactgcaga ttttttgata ccgctactaa agccgtatca
      301 agtaagagat ggtgcatccg ggaggattac tcgccttgcg gctcgccctt cgggccgttg
      361 ctaaagcaac gttatcctcc ctggtgcctg cggttatacc gccacctctt ccataccttc
      421 atcgctgaaa gtacgtagaa tatggtgcat ccgggaggat tcgaacctcc gaccgctcgg
      481 ttcgtagccg agtactctat ccagctgagc tacggatgca aatggcggtg aggcggggat
      541 tcgaaccccg gatgcagctt ttgaccgcat actcccttag caggggagcg ccttcagcct
      601 ctcggccacc tcaccacacg cctcttacga gtgcttcgaa gaacttgttt atcgctcatc
      661 gtcgctgcgt ggcgcacata ttactttctg agacttataa gtcaaacaat ttttcctaca
      721 cttttatcgt ttgcacactt cacgttcaat tagtctgtaa aaacgtcaaa aagagtgttt
      781 tatcaacaga aaaatggagg tctgacagat agtagtaatg caaaaaaatg gagacttaag
      841 ttgaatgaac gggagtaaag cgaaaagact atagagtgaa ggagaaattt tgagggtgcg
      901 tctcaccgat aaagatgaga cgcggaaaga ttagtaactg gactgctggg atttttcagc
      961 ctggatacgc tggtagatct cttcacggtg aacagaaact tccttcgggg catttacgcc
     1021 aatacgtacc tggttgccct ttacccctaa aactgtcacg gtgacctcat ccccaatcat
     1081 gagggtctca ccaactcgac gagtcagaat cagcattctt tgctccttga aagattaaaa
     1141 gagtcgggtc tctctgtatc ccggcattat ccatcatata acgccaaaaa gtaagcaatg
     1201 acaaacacat tacatgtaag cagtcatggc attacattct gttaaaccta agtttagccg
     1261 atatacacaa cttcaacctg actttatcgt tgtcgatagc gttaatgcga atgccgtgaa
     1321 gcgagtccac ggcattgcct gacgcttata ttattgcaat ttcgcgctga cccagccttt
     1381 cacactggct aacgctgcag gtaaggccgc agcatccgta ccaccggctt gcgccatgtc
     1441 aggacgtcca ccacccttgc cgcccacctg ctgagcgacc ataccaatca gttcccctgc
     1501 tttcacacga tctgtgacgt ccttagatac gcctgcaatc agagaaacct taccttcggc
     1561 taccgttgcc agcacgataa ttgtcgaccc cagctgattt tttaaatcgt caaccatggt
     1621 acgcaacatt ttcggctcaa caccgctaag ctcgctaacc aacagcttaa caccattaac
     1681 atcaattgcc ttactggaaa gatttgcgct ctcctgtgcg gcagcttgtt ctttaagctg
     1741 ttgtagttct ttttctaact gacgcgtacg ttccagtact gagcgcactt tatccgccag
     1801 attattgcta tcgcctttca gcagatgcgc gacttcgctt aagcgatcgc tgtctgcatg
     1861 aacggtggtg atagcgcctt ctccggttac cgcttcgata cgacgaacgc ctgcagcagt
     1921 acccgattca gagatgatgc ggaacagacc aatatcacca gtgcggctgg cgtgagtacc
     1981 gccacacagc tcggtggaga aatcgcccat gctcagcacg cgtacacgct catcatactt
     2041 ctcgccgaac agcgccatcg cacctttcgc tttcgccgct tcgagatcca tgatgttggt
     2101 ttcgatcggc aaattgcgac gaatctgtgc gttcaccagg tcttcgaccg cacgaatctc
     2161 ttccggtttc atcgcttcgt tgtgtgagaa gtcgaagcgc agcaccttgt cgttaaccag
     2221 tgaacctttc tgcgatacat gagtccccag aacctggcgc agcgcagcgt gcatcaggtg
     2281 cgttgcggag tgattcagac gaatacgggc gcgacgagcc tcatcaacat cagcctgcac
     2341 agcgtcgccc actttcagag aacccgcagc aagtttaccg atgtgaccaa tcgcctggcc
     2401 gtatttctgc gtatcttcca ccgcgaagga gaagttagcg cctttcagtt cgcctttatc
     2461 accaacctga ccgccggatt ccgcatagaa tggtgtttga tccagcacga ccacagcttc
     2521 ctggcctgca ttgatggcat caaccgcttt accatcaaca aacagcgcgg tcactttgcc
     2581 gttcagttcc agatggtcat agcctttaaa ttcagatgca ctatcaacac ggatcattgc
     2641 gttgtaatcg gcaccaaagc cgctggcttc gcgcgcgcga cgacgctgct cttccattgc
     2701 tgcttcaaaa ccagcttcgt caactttgat gttgcgctca cgacaaacat cagccgtcag
     2761 gtcaaccggg aagccatagg tgtcgtacag acggaaagcc gtttcaccat ccagcgtatc
     2821 accagaaagt tttgccagct cttcatccag caacgccaga ccgcgctcca gagtacgggc
     2881 aaactgctct tcttcagtct tcagcacctg ctcaacctgc gcctgctggc gtttcaggtc
     2941 ttcacccgca gagcccataa cgtcgatcag cggaccaacc agtttgtaga agaaggtttc
     3001 tttcgcgccg agcatattgc cgtgacgcac tgcgcgacga atgatacgac gcagtacata
     3061 accacggttt tcattggacg gcattacgcc atccgcgatc aggaacgcac aagaacgaat
     3121 gtggtcagcg attacgcgca gcgatttatt gctcagatcg gtcgcgccag tgactttcgc
     3181 taccgcctgg atcaacgtgc ggaacaggtc gatgtcatag ttagagttaa cgtgttgcag
     3241 caccgcagca atacgctcca gacccatacc ggtatctaca gacggcttcg gcagcggttc
     3301 catcgtgcca tctgcctggc ggttgaactg catgaagacg atgttccaga tctcaatgta
     3361 gcggtcgccg tcttcttccg gacttcccgg agggccaccc caaatgtggt cgccgtgatc
     3421 gtagaagatt tcggtgcacg ggccgcacgg accagtgtca cccatctgcc agaagttgtc
     3481 agatgcgtat ggcgcacctt tgttatcgcc gatgcgaata atacgttcgc gcgggatccc
     3541 gacttctttt tcccagattt cgtaggcttc gtcgtcgctt tcatagacgg taacccacag
     3601 acgctctttc ggcagggcaa accatttttc gctggtcagc agttcccatg caaactgaat
     3661 ggcatcgtgt ttgaaatagt cgccgaagct gaagttgccc agcatttcga agaaggtatg
     3721 gtgacgcgcg gtgtaaccga cgttttccag gtcgttgtgt ttaccacccg cacgcacgca
     3781 gcgttgggaa gtggtagcgc gggaataatt acgcttgtcg agcccaagga atacatcctt
     3841 gaactggttc atcccggcgt tggtaaacaa caaagttggg tcgttatggg gtaccaggga
     3901 gctgctggca actacctgat gtcccttact atggaaaaag tcgagaaacg cctgacggat
     3961 ctcagcggtg ctcttgctca taattatcct gaaatcaagc taacgaaata tcgccaccag
     4021 ctccagcgtg tcttaaccgc cgggctggta actgaaaagt gggaataaga taagttttct
     4081 tgactgggaa gtaaaatacc gtatgcgttc agtcggcaaa atttcgccaa atatcctgga
     4141 tatcttccat cagatagcca cgatagagca gaaaacgctg gatcttaact ttttctgaaa
     4201 agacagttgg caaaggttca ccatattttc gcgtcgcctg atcgcgcgcc agtgcgcacc
     4261 agtcgatgtc acattcacgc atcgcttttt ctgtcgcttc gcgggaaata cctttctgat
     4321 tcagttcctg acgaatacgt gcaggtccat aacctttgcg gctacggctg gcgataaagc
     4381 gcgcaacaaa tcggctgtca tcgagatagc catgttcatg gcaccaggca ataacgcgct
     4441 cgtaatcttc tgccgtagca tcaatctctt ctgggccatt tttgcccata atcggtgccg
     4501 cgagtttacg tcgcagttct tgctcactgt gatcgcgcac cgccagaatg cgtaccgcac
     4561 gatccaacag gcgagcatat gccgggcgac gggatgttga ttctgtcatg gcatatcctt
     4621 acaacttaaa aaagcaaaag ggccgcagat gcgaccccgg ttttgctgat aaacagattt
     4681 aatagtcaat gagtgtgcag aatgttcccg caggcccaat tcgttagagg atcgaggtga
     4741 gagtaatttt tcacgccagt gctggcctgt tcccctcacc ctaaccctct ccccaaaggg
     4801 gcgaggggac cgtccgtgca cacattatct attatcatca ataacgaacg attaaaaatc
     4861 ttcgttagtt tctgctacgc cttcgctgtc atctacagag aaatccggcg ttgagttcgg
     4921 gttgctcagc agcaactcac gtactttctt ctcgatctct ttcgcggttt ccgggttatc
     4981 tttcagccag gcagttgcat tcgctttacc ctgaccgatc ttctcacctt tgtagctgta
     5041 ccacgcgcct gctttctcga tcagcttctc ttttacgccc aggtcaacca gttcgccgta
     5101 gaagttgata ccttcgccgt agaggatctg gaattcagcc tgtttaaacg gcgcagcgat
     5161 tttgttcttc accactttca cgcgggtttc gctacccacc acgttttcgc cctctttcac
     5221 cgcgccgata cgacggatgt cgagacgaac agaggcgtag aatttcagcg cgttaccacc
     5281 ggtagtggtt tccgggttac cgaacatcac accaattttc atacggatct ggttgatgaa
     5341 gatcagcagc gtgttggact gcttcaggtt acccgccagc ttacgcatcg cctggctcat
     5401 catacgtgcc gcaaggccca tgtgagagtc gccgatttcg ccttcgattt ccgctttcgg
     5461 cgtcagtgcc gccacggagt caacgacgat aacgtctact gcgccagaac gcgccagggc
     5521 gtcacagatt tccagtgcct gctcgccggt gtccggctgg gagcacagca ggttatcgat
     5581 atcgacgccc agtttacgtg cgtagattgg gtccagcgcg tgttcagcat cgataaacgc
     5641 acaggtttta ccttcacgct gcgctgcggc gatcacctgc agcgtcagcg tggttttacc
     5701 ggaagattcc ggtccgtaga tttcgacgat acggcccatc ggcagaccac ctgccccaag
     5761 cgcgatatcc agtgaaagcg aaccggtaga gatggtttcc acatccatgg aacggtcttc
     5821 acccaggcgc atgatggagc ctttaccaaa ttgtttctca atctggccca gtgctgccgc
     5881 caacgctttc tgtttgtttt cgtcgatagc catttttact cctgtcatgc cgggtaatac
     5941 cggatagtca atatgttctg ttgaagcaat tatactgtat gctcatacag tatcaagtgt
     6001 tttgtagaaa ttgttgccac aaggtctgca atgcatacgc agtagcctga cgacgcaccg
     6061 catcacggtc gccgctgaag cattcccgcc gggtaatgcc ttcaccgcgg gcagtggcaa
     6121 aagcaaacca gacggtgccg acaggcttct cttcactgcc gccatccggc ccggcgatac
     6181 cactaataga cacggcataa tcagcacgag ccgctttcag tgcgcctatc gccatttcca
     6241 ccacgacggg ttcactcacc gcgccatgct gcgccagcgt ctcttcgcgt acgccgatca
     6301 tctgcgcttt ggcttcgtta ctgtaggtga caaatccgcg ttcaaaccag gcggagctac
     6361 cggcaatatc ggtaatcact ttcgctaccc aaccaccggt acaagactcg gcagttgtta
     6421 cggttgcgcc acgggctttc agcgcctgcc caacctgttc acttaactgc atcagttcac
     6481 tgtcagtcat cacaacctct gtcagtcaaa aatttatgcc ggacaagata gcactttcgt
     6541 caggaagatg gtgttggcgt tgcaatttta cgaggaggat tcagaaaaaa gctgattagc
     6601 cagagggaag ctcacgcccc cctcttgtaa atagctactg tactcgcgcc agcgccacgg
     6661 cttgtcctaa ctgccagacc gccattgcgt aatgggtgct gtggttgtaa cgggtgatgg
     6721 tgtagaagtt cggcagaccg taccagtact ggtagccggt gccaacatcc agacgcagca
     6781 ggctggcttg ttgatggttg cccagcggct gctgtggcgt taaacctgcg gcggcaagct
     6841 gcgaaatgct gtacttagtt ttgaagccat ttggcaagcc tggagcctga ccgtttgcca
     6901 ttaccgcgac ctgatcgcct ttcacccagc cgtgcgcttt gaaatagttc gccacgctac
     6961 cgatcgcatc aaccggatcc cacaggttga tatgcccgtc gccgctgaaa tctaccgcat
     7021 attgtttgta agacgacggc ataaactgtc cgtagcccat cgccccggca aaggaacctt
     7081 tcagattgag cggatcgtcc tgctcgtcgc gcgccatcaa caggaaggtt tccagctcgc
     7141 cagagaaata ctccgcgcgg cgtgggtagt taaatgacag cgttgccagc gcatcgagga
     7201 tgcgagtttt ccccatcacg cgcccccagc gggtttcaac gccgataatc ccgacgataa
     7261 tttccggcgg tacgccatac acctgccacg cgcgattcaa cgcatcttca tactgattcc
     7321 agaaaaccac accgttctgc acgttgtccg gcgtaataaa ttttttgcga taacgcagcc
     7381 atgcgccgtt cggacctgat ggcggtttca ccgatgtggt tggtgcctgg ttatccatca
     7441 gccgcagtac cgaatccaga cgtttcgcct gggagagaat ttcctgcaac tgctgacgat
     7501 cgaaaccgtg tttgttcacc attttgtcga tgaactgctg ggcattcggg ttattagcga
     7561 aatcgccgcc catctgcatc acattgtgct gcggctcaag caggaagccg ccagacggcg
     7621 ttccggtggt cgtatcagtc tcagtaggtt ttggcttgct gctacaggcg gcaagcaaca
     7681 caaaaagggg aagcaatgtt acataacgac gcttgaacat gaggggtcca tttaacagat
     7741 tcaaccaggg gcaagtatgg taaagcatca cgccccgcac aaggaagcgg tagtcactgc
     7801 ccgatacgga ctttacataa ctcaactcat tcccctcgct atccttttat tcaaactttc
     7861 aaattaaaat atttatcttt cattttgcga tcaaaataac acttttaaat ctttcaatct
     7921 gattagatta ggttgccgtt tggtaataaa acaataaatc ctgaaggaga gaacaatgat
     7981 agaaaccatt actcatggtg cagagtggtt tatcgggctg ttccaaaagg gcggagaggt
     8041 gtttaccggg atggtgaccg gcattcttcc gctgttgatt agcctgctgg ttatcatgaa
     8101 cgcactgatt aattttatcg gtcagcatcg tattgaacgt tttgctcaac gttgcgccgg
     8161 taaccctgtt tcccgttacc tactgttacc gtgcattggc acgtttgtct tttgcaatcc
     8221 gatgacccta agcctgggtc gctttatgcc ggaaaagtac aaacccagct actacgcggc
     8281 ggcctcttat agctgccact caatgaatgg cctcttcccc catatcaacc ctggcgaact
     8341 gtttgtttat cttggcattg ccagcggtct gacaacgctg aacctgccac ttggcccact
     8401 ggcggtgagt tatctgctgg ttggtctggt caccaatttc ttccgcggct gggtgaccga
     8461 tctgaccacc gccatttttg agaaaaagat gggcattcaa cttgaacaaa aagttcacct
     8521 ggcaggagca acatcatgac gcatattcgg atcgaaaaag gaacgggtgg ctggggcggc
     8581 ccgcttgagc tgaaagccac gccgggaaaa aaaatcgtct atatcaccgc cggtacccgg
     8641 cctgcgattg ttgacaaact ggcacagctt actggctggc aggctattga cggatttaaa
     8701 gaaggtgaac ccgcggaggc ggaaattggt gtcgcggtaa tcgactgtgg cggcacatta
     8761 cgctgcggca tctatccgaa acgacgtatt cccaccatta atatccactc gacgggcaag
     8821 tccggtccgc tggcgcagta cattgtggaa gatatttatg tctctggcgt aaaagaagaa
     8881 aacatcactg tagtaggtga tgcgacacca caaccctctt ccgtgggccg tgactatgac
     8941 accagtaaga aaatcaccga acaaagcgat ggtttactgg cgaaggtggg aatgggcatg
     9001 gggtccgccg ttgcggtgct gtttcaatct ggtcgtgaca ccatcgacac tgtattaaaa
     9061 accattctgc cgtttatggc attcgtctcg gcgctcattg gcatcattat ggcttctggc
     9121 cttggtgact ggattgccca cggtcttgct ccgctggcga gccatccact gggtctggtc
     9181 atgctggcgc tcatctgttc cttcccactg ctttcacctt tcctcggccc aggcgcagtt
     9241 atcgcacagg ttatcggcgt attgattggc gtgcagattg gtctcggcaa tattccgccg
     9301 catctggctt taccggcact gtttgccatc aacgcgcagg cggcctgcga cttcatcccg
     9361 gtcggtttgt cgctggcgga agcccgtcag gacacggttc gcgtcggtgt cccttctgta
     9421 ctggtgagcc gctttttaac cggcgcgccg actgtactga tcgcctggtt tgtctccggt
     9481 tttatctatc aatagaggct gaaacatgac cgttatttat cagaccacca tcacccgtat
     9541 cggcgcgagt gccattgacg ccctcagtga ccagatgctc atcacctttc gtgaaggcgc
     9601 gcctgcggac ctcgaagagt attgcttcat tcattgccac ggcgagttga aaggtgcact
     9661 ccatcccggt ttgcaatttt cactcgggca gcatcgctat ccggtgaccg ctgttggcag
     9721 cgtggcggaa gacaaccttc gcgaactggg tcatgtcacc ctgcgcttcg atggtttaaa
     9781 cgaagcggaa tttccgggca ctgtccatgt ggcaggccct gtccccgacg atatcgcgcc
     9841 gggatcggtt ttgaagtttg aatctgttaa ggagtaaaaa atgaatcagg ttgccgttgt
     9901 catcggtggt gggcaaacct taggcgcgtt cctgtgccac ggtctggctg ccgaggggta
     9961 tcgcgtcgcg gttgtcgata ttcagagcga caaagccgca aatgtggcac aagaaattaa
    10021 cgccgaatat ggtgaaagta tggcgtacgg ttttggtgct gacgccacta gcgagcaaag
    10081 cgttctggcg ctctctcgtg gggtagatga aatctttggt cgcgtggatt tgctggtcta
    10141 cagcgccgga atagcaaaag cagcctttat cagcgacttc cagctcggcg attttgaccg
    10201 ttcgctacag gtgaatctgg tgggttattt cctgtgtgcg cgtgaatttt cgcgtttgat
    10261 gatccgcgac gggattcagg ggcgcattat tcagatcaac tcgaaatccg gcaaagtggg
    10321 cagcaaacac aactctggct acagcgcagc gaaatttggt ggcgtcgggc tgactcaatc
    10381 actggcgctg gatctggcgg agtacggcat tacggtgcat tcactgatgc tcggtaacct
    10441 gctgaaatcg ccgatgttcc agtcactgtt gccacaatac gcgaccaagc tgggtatcaa
    10501 accggatcaa gtcgagcagt attacatcga caaagtaccg ctcaaacgcg gctgcgatta
    10561 tcaagatgtg ctgaatatgc tgctgttcta cgccagtcct aaggcgtcgt actgcaccgg
    10621 acagtcgatc aatgtcaccg gcggtcaggt gatgttctga tcaacagcgg agatccatta
    10681 aggatctccg tgagactata gaatgcctga tgcgctacgc tcatcaggca tacaggactt
    10741 ccgccactac attaaggaaa agttatggta tccgcactca tcaccgtcgc cgttatcgcc
    10801 tggtgtgcgc aactggcctt aggcggctgg caaatttctc gttttaaccg tgccttcgac
    10861 acactatgcc agcaagggcg ggttggcgtg ggccgttcca gcgggcgctt taaaccacgg
    10921 gtcgtggtcg ccatcgcgct ggacgatcag cagcgcatcg tcgacacctt gtttatgaaa
    10981 ggactgaccg tcttcgcccg accgcaaaaa attcccgcaa ttaccggtat gcatgcgggt
    11041 gatttacagc ccgatgtgat ctttccccat gatccactat cacagaatgc tctatcattg
    11101 gcgcttaaac tgaaacgtgg ataatttcgt tgtgaatgtt acttgcttgc gaagttatca
    11161 ttttgaaacc taaatcaggt aatcacgccc atgaaacctc gtcagcgtca ggccgccatt
    11221 ctggagtatc tgcaaaagca gggtaaatgc tcggttgaag aattggcgca atactttgac
    11281 accacaggca caaccattcg caaagatctg gtcattctgg aacatgccgg aaccgtcatt
    11341 cgtacttatg gcggagtggt gttgaataaa gaggaatccg atccgcctat cgatcataaa
    11401 acactcatca acacccacaa gaaagagctg attgcagaag ctgccgttag ttttatccat
    11461 gatggcgatt cgatcattct tgatgctggc agtaccgttt tgcagatggt tcccctgctc
    11521 tcgcgcttta ataacatcac ggtgatgacc aacagcctgc atatcgtcaa tgcgctatcc
    11581 gaactggata acgaacaaac tatcctgatg ccaggcggaa cgtttcgtaa aaaatcggcc
    11641 tcatttcacg gacagctggc agagaatgcc ttcgaacatt tcagtttcga taaattgttt
    11701 atgggcaccg acggcatcga tctcaatgcg ggcgtaacca ccttcaacga ggtttatacc
    11761 gtcagtaagg caatgtgcaa tgccgcgcgc gaagtgattt tgatggcgga ctcatcaaag
    11821 tttggccgta aaagccccaa cgtagtttgc agtcttgaaa gcgtcgataa gctgattacc
    11881 gacgcaggta tcgatccggc gtttcgtcag gcgctggaag agaaagggat cgatgtgatc
    11941 ataaccggag agagcaatga gtgaagcact actgaacgcg ggacgtcaga cgttaatgct
    12001 ggagttgcag gaagcaagcc gtttaccgga acgtctgggc gatgattttg ttcgcgccgc
    12061 caatatcatc ctgcactgcg aaggcaaagt ggtggtttcg ggaattggca aatcgggcca
    12121 cattggtaag aaaatcgccg caacacttgc cagtaccggc acaccggctt tttttgtcca
    12181 tccggcagaa gcactgcacg gcgatctggg gatgattgaa agccgcgatg tgatgctgtt
    12241 tatctcttac tccggtggcg cgaaggaact ggatctgatt attccgcgtc tggaagataa
    12301 atctatcgcg ctgctggcga tgaccggcaa accgacgtca ccgctgggcc tggcggcaaa
    12361 agcggtgctg gatatctccg tagaacgcga agcctgcccg atgcaccttg cgccgacctc
    12421 cagcaccgtc aataccctga tgatgggtga cgcgctggcg atggcggtca tgcagacgcg
    12481 cggatttaat gaagaagatt ttgcccgctc ccacccagcc ggggcactgg gcgctcgctt
    12541 gctgaataaa gtgcatcatc tgatgcgccg tgacgatgcc atcccacagg tggcgttaac
    12601 cgccagcgtg atggatgcga tgctggaact cagccgcacc ggtctggggc tggtggcggt
    12661 atgtgacgct caacaacagg tacaaggcgt ctttaccgac ggcgatttac gtcgctggct
    12721 ggttggcggc ggcgcactca ccacgccagt taatgaagcg atgacgacag gcggcaccac
    12781 attacaggca caaagtcgcg ccatcgacgc caaagagatc ctgatgaagc gcaaaatcac
    12841 tgccgcaccg gtggtggatg aaaacggcaa actcaccggc gcaattaacc tgcaggattt
    12901 ctatcaggcc gggattattt aatccttcaa tcccagacgt ttcgccagcc gatgcaggtt
    12961 ggcgacgtcg gtttccagca tccgcgcgca ggcagcccag ttgtgatgat tttgtgccag
    13021 tgcctggcga atggtttcac gctggaacgc ttctgtcgct tcacgcaggt tttgcttaac
    13081 aacgggcacc gccgccgctt ctggcggcgg caacgtcacc tcaggaaaag caaaatgttg
    13141 tgcctcaaga atcacttcat cgccgctgcg agtggctctc gccagcacta ccgcccgatg
    13201 aatagcatgt tccagttcgc gcacgttccc cggaaaacga tagtgttgca gtaaatttcg
    13261 cgctccggca cttaatacca cgcgggagag ccccagccgc aaacgacact gctcgcagaa
    13321 ataccccgcc agcagaatga catcatcgcc ccgctcacgc agcggcggca ccgaaagtgg
    13381 aaacacgctc aggcgatgaa acaaatcggc gcggaatcgc cctgccagca cctcttcgcg
    13441 taagtcgcgg ttagtcgccg ccagcacgcg cacatcgacc cgcaaactac ggtcatcgcc
    13501 aacgcgctga atatcgccat actgcaacac cctcagcagc ttggcctgca atgccaacga
    13561 caactcgccg atctcatcga gaaacagagt gccgttatcc gccatttcaa acttcccgct
    13621 gcggttactg atagcgccag taaacgctcc tttcacatgc ccgaacaact cactttccgc
    13681 cacactttcc ggcagtgcgg cacagttgag atagaccagc ggattcaccg cccgtggcga
    13741 ggcttcatga atcgctttcg ccaccagctc cttaccggtt cccgtctcac cgctgatcag
    13801 aacgttgaga tcggacgccg ccacaatctc aatctctttt ttcaattgcg tcatgcctgg
    13861 cgacaagcca atcatctgcg tctgtttcac cgcttcaaac ggcgcggcat cgcccggcag
    13921 catattctgg ctttccagtt gttcaatcag caacgcattg cttaacgctc ccgccgccag
    13981 cgcggcaatc agccgtaact cttcgtcgct gaaaacatcg aactgatcgg gctgcatccc
    14041 gtcgagcgtc agtgcgccga tcaggttttg cccggcaaac aatggcagac caacgcaggc
    14101 gtgaaccttc agactctcct gcccaggaat caaaccgtca tagggatcgg gcaattcgct
    14161 gtctgcagga aagcgcacca catccccggc gcgggcaatc gcttccagcc gtggatgccc
    14221 ttccagcgca aagcgtctac cgagtacatc ctttgccaga ccgtcgatgg caagcggaat
    14281 aaactgccgc gaatcgtaac gtagcaacgc agacgcatcg cactccagca cctgacgtag
    14341 cgtggtgatc aggcgctgaa aacgatcctg atgaccaatc ccacgctgca attcgatggc
    14401 gatattcgcc agcacatcaa cggaaaaact catctttgcc tcactgtcaa tttgactata
    14461 gatattgtca tattgaccat ttgattgata gtcattttga ctactcatta atgagcataa
    14521 ttttatttat agagtaaaaa caatcagata aaaaactggc acgcaatctg caattagcaa
    14581 gacatctttt tagaacacgc tgaataaatt gaggttgcta tgtctattgt ggtgaaaaat
    14641 aacattcatt gggtgggtca acgtgactgg gaagtgcgtg attttcacgg cacggaatat
    14701 aaaacgctgc gcggcagcag ctacaacagc tacctcatcc gcgaagaaaa aaacgtgctg
    14761 atcgacaccg tcgaccataa attcagccgc gaatttgtgc agaacctgcg taatgaaatc
    14821 gatctggcgg atatcgatta catcgtgatt aaccatgcag aagaggacca cgccggggcg
    14881 ctgaccgaac tgatggcgca aattcccgat acgccgattt actgtactgc caacgctatc
    14941 gactcgataa atggtcatca ccatcatccg gagtggaatt ttaatgtggt gaaaactggt
    15001 gacacgctgg atatcggcaa cggcaaacag ctcatttttg tcgaaacgcc aatgctgcac
    15061 tggccggaca gcatgatgac ttacctgaca ggcgacgcgg tgctgttcag taacgatgct
    15121 ttcggtcagc actactgcga cgagcatctg ttcaacgatg aagtggatca gacggagctt
    15181 ttcgagcagt gccagcgtta ctacgccaat atcctgacgc cgttcagccg cctggtaacg
    15241 ccgaaaatta ccgagatcct gggctttaac ttaccagtcg atatgatagc gacctcccac
    15301 ggcgtggtct ggcgcgataa cccgacgcaa attgtcgagc tgtacctgaa gtgggccgct
    15361 gattatcagg aagacagaat caccattttc tacgacacca tgtcgaataa cacccgcatg
    15421 atggctgacg ctatcgccca gggaattgcg gaaaccgacc cacgcgtggc ggtgaaaatt
    15481 ttcaacgtcg cccgaagcga taaaaacgaa atcctgacca atgtcttccg ctcaaaaggc
    15541 gtgctggtcg gcacttcgac gatgaataac gtgatgatgc cgaaaatcgc cgggctggtg
    15601 gaggagatga ccggattacg cttccgtaac aaacgcgcca gtgctttcgg atctcacggc
    15661 tggagcggcg gtgcggtgga tcgcctttcc acgcgcctgc aggatgcggg tttcgaaatg
    15721 tcgctcagcc tgaaagccaa atggcgacca gaccaggacg ctctggagtt atgccgtgaa
    15781 cacggtcgcg aaatcgcccg tcagtgggcg ctcgcgccgc tgccgcagag cacggtgaat
    15841 acggtagtta aagaagaaac ctctgccacg acgacggctg acctcggccc acgaatgcag
    15901 tgcagcgtct gccagtggat ttacgatccg gcaaaaggcg agccaatgca ggacgttgcg
    15961 ccaggaacgc cgtggagtga agtcccggat aacttcctct gcccggaatg ctccctcggc
    16021 aaagacgtct ttgacgaact ggcatcggag gcaaaatgag taacggcatt gtgatcatcg
    16081 gttcgggctt cgccgcccgc caactggtga aaaatattcg caaacaggac gccactattc
    16141 cattaaccct gattgccgcc gacagcatgg atgagtacaa caaacctgac ctcagccatg
    16201 ttatcagtca ggggcaacgt gccgatgacc ttacccgcca gacggcgggt gaatttgccg
    16261 agcagtttaa tctgcacctg tttccacaaa cctgggtgac ggatatcgat gccgaagccc
    16321 gtgtggtgaa aagccagaat aatcagtggc aatacgacaa gctagtactg gcaaccggtg
    16381 ccagtgcctt tgtcccgcct gtgcctgggc gtgagttaat gctgacgtta aatagtcagc
    16441 aagagtatcg cgcctgtgaa acgcaactgc gggatgcccg acgcgtgttg attgttggcg
    16501 gtggtttgat tggtagcgaa ctggcgatgg atttttgtcg tgcaggcaaa gcggtcacgc
    16561 taatcgacaa cgctgccagt attctggcgt cattaatgcc accggaagta agcagccgct
    16621 tgcagcatcg gttgacggag atgggcgttc atctgttgtt gaaatctcag ttgcaggggc
    16681 tggaaaaaac agattctggc attctggcaa cgctggaccg ccagcgcagt atcgaagtgg
    16741 atgcggtaat tgccgccacc ggactgcgcc cggaaaccgc cctggcacga cgcgccgggc
    16801 tgacgattaa tcgcggcgtt tgcgtcgata gttatctgca aaccagtaat gccgatattt
    16861 acgcgctggg cgattgcgcg gaaattaacg gtcaggtatt gccgttcctc cagccgattc
    16921 aacttagcgc gatggtgctg gcaaaaaatc ttctcggcaa taacacgcca ctgaaactac
    16981 cggcgatgct ggtgaaaatc aaaacgccgg aattaccgct gcatctggca ggcgaaaccc
    17041 agcgtcagga tttacgctgg caaattaata ccgaacgcca gggaatggtg gcgcgcggcg
    17101 ttgacgatgc tgaccagctt cgcgcctttg tggtcagtga ggatcggatg aaagaggcat
    17161 ttggattgtt gaaaacattg ccgatgtagg tgggctactg tgcctaaaat gtcggatgcg
    17221 acgctggcgc gtcttatcca acctacgggg agcgcatgtg ttggtcacat actgcgttca
    17281 tgtcgcatcc acctactgtg cccaaaatgt cggatgcgac gctggcgcgt cttatccgac
    17341 ctacggggac gcatgtgtag gccggataag gcgtttacgc cgcatccggc aatggtgtcc
    17401 aaatgcaaca cgttttatcc gttctggact tcacccgcta accaacgcgc cgcagcaata
    17461 accccctgcc ccagagacaa accgccatca cccgccggta aactctgtgg aaagagcaat
    17521 gtgaaatcag cgagataatg cgccagacgt gcacgcagca aacggttatg aataaccccg
    17581 ccgctaaata ccagcgtagt gataccacgc atcgtggcct gctcacgcat caacgcggca
    17641 aaaccctgcg ccagcgcatc atgaaacgcc cacgcgcgtt gattaaccgg tgcctgccag
    17701 ttcagccact gctgccagaa agtggcgaga tccagttgat tgtccaccag cggcattgtc
    17761 accggatgcg tcactccgtg gcacgaagct gcgagtgcct ccagagcaca agccgcttca
    17821 ccttcataac ttaacgtggc tggcgcacag cccagtgccg ccgccacggc atcgaacaac
    17881 cgcccacacg atgacgccag cggcgcgtta attccacgct caatggcccg cgccagcacg
    17941 ctccagtttt gctgttgcac acttgctgtt tcagaataat tctgccactc cggcacaaag
    18001 cgcaggcact gcgccagcag gtttcgccac ggctgcgtcg ccgccaaatc gccacccgga
    18061 agcgccactg caggcaagcc gcccaggtgc tcacattcgc gatagttcac ccgcagacac
    18121 tcgccgcccc acaaagcgcc gttctccccc ataccgatac catcgagcgt caaagcaatg
    18181 acatcaccgc catccagcgg ccactgatgc tctgccagac acgccgctgc gtgggcatga
    18241 tgatgcagca ccgtttgcgt cggcatattc atttcgctcg cccactggct ggagacatag
    18301 cccggatgca cgtcatgcac aacgtattgc ggagtgaaat cgtagatgtt ttgcatcagg
    18361 cgtaacgctt cgcgccactg catctggatg ccatcgtcac ttaaatcgcc cagatgctga
    18421 ctcaacaccg cttgttcacc gcgcaccagg cagaaggtgt ttttcagatc cgcgccaaga
    18481 cacagcacag gcggaacatt tttaaagccc ggaggcaaaa ccagcgcatc cggcacatac
    18541 ccgcgtgaac ggcgcagcat ttcgccgctt tcgcgcacca ccgaatcatc catccgctgc
    18601 acgatgtcgc ggttatgtat caagaatccg tcggcaatgc cctgcaaatc cgccagcgcc
    18661 tgttcgttgc tgatagctgg tggtttaccg ctcaggttgc cggaggtcat caccagcggg
    18721 cattgcagtt cctgtaacag caaatgctgg agcgggttcg caggcaacat taccccgact
    18781 tcgttaaggt caggggcgat atcatcacaa agctcaggaa cgtatttttt atccaccagc
    18841 acaatcggcg cggcgggcgt ggtaagcaac tggcgcgcag cgtctggtaa accgtcagcc
    18901 actggcaaca tgaccgccag cggtttcgcc gggcgatgtt tgcgcgcccg cagtgtcgcc
    18961 accgcgttac tgttacgtgc atcgcaggca agatgaaatc cgccaatccc tttgatggcg
    19021 acaatgttgc ccatttttaa ctgtgcgata gccgcctgta atgccgcctc ttgttctgca
    19081 tgttcaccat gacttaccca ttcaagatgt gggccacact ccgggcaggc caccggctgg
    19141 gcgtggaagc gacgatcgag cgggtcgcgg tactctttgt cacaagccgg acacaacgga
    19201 aacgccgcca tcacggtaaa cgggcggtcg taaggcatgg cgcgaataat ggtgaaacgc
    19261 gggccgcagt gggtacagtt gataaacgga taacgataac gccgttcgcc tggggtattc
    19321 atttcggcaa gacaggcagg gcaagtagcg gcatcgggaa caatttgcgt attcatggtg
    19381 ccgcctgtgc tctggcgtat agtgaactcg gtgggcagtt gtgaccagat gtacggctca
    19441 cgctcgacgc tatcaatacg cgccagcggc gggcagtgct gatgcaattg aacaagaaac
    19501 gtttccgggt cttccagcag ccggacttct acgccatcgc cgtcattaca gacatcgccg
    19561 tgaagattta attgctgtgc cagctgccag acaaacggac gaaaaccgac gccctgcact
    19621 ttgcctcgaa tacgcagttg gacaccgcaa gatgtgtttt ttgccattga gttattcccg
    19681 ccatcatgaa ttgcgtaacc cgccctgccg gacacgactg cgtcgtatcc ggcagtctca
    19741 ggtcggcgat accgccagct ccgtattcta cgaatatttc cgggaattcc tttgatgcca
    19801 gaacagttct ataagatttt tagaacatca gcgccgtacg gcgacgtttt tctgcgctca
    19861 gttgttcaag tttattacga tcgacacaaa tcagcgcatg agtcgggcaa gccgccatac
    19921 acgccgggcc gtcttcacga tggttgcaca ggtcacattt attggcttca gctttgtcag
    19981 cccgtacatt cagccccgcg ccgctgttgc ggatcaccgg acgtaccacc acttccatcg
    20041 cgccatacgg gcaagccacc acgcaggttt tgcaaccaat gcaacgttcc tgcatcacat
    20101 gaacaaaccc tttatcacgg ctgatagcac cattcgggca gacgttagcg cacggtgcat
    20161 cttcacactg acggcaaact gtcgccgtgg aaatgttcac acctttaatg acatggatac
    20221 gcggtaaaaa tgtttccggg gtcagcgatg cacagtcctg attttcctga tgagaaacca
    20281 cgcacgccac ttcacaggta cggcaaccaa tacatttact cgcgtcagca atgatgaaac
    20341 ggttcatcaa attctccagc aatgacagtt aatgcgccga tacattcaca aatcatgcca
    20401 gtttttaatt cactgttatt taaggaaatt aatttctgta atgcaggaaa aaagatgtca
    20461 tcgacactag tgacgatgac atgtgatgac aatgtttatc gcgaaagagc aatgagtgag
    20521 tcgcggcgga tcagttttcc gctgaaggtt ttcggcggtg agaaatcccc gccatcgagc
    20581 ataaaaatca gccgtccaat aatttcctga atcatctcag tcaccggaat ttttacgctg
    20641 gagagcgccg gaacggtgta gggggcaata gcgatatcat cgaatccgat aactgacacc
    20701 tgctctggca ccgctacgcc gcgctcgtgt aacgctttca tcgcacctat cgccatatcg
    20761 tcgttactgg caactaacgc gctaaattta gccccacgtt cgagcaacat ttctacccct
    20821 tcggccccgc tggcaggcgt ccatttaccg ttagcgataa gtttttcatt gagcgcaata
    20881 ccatgctgcg ccagcgcgtc tttatacccg gcaagacgtt caatgctggt gggggaatcc
    20941 atcgagccgg taaggaaagc aatctcctga tgcccggcgt ttatcaactc tgccacggcg
    21001 ttaaagctgg tctgtttatg atcgcaccag acgctatggc tgctattttt gcgcaggcgg
    21061 cgattaagca ccattatcgg ctgactgtgc gcgtcaatga tgtcatcaat ctcatccacg
    21121 cttaaaaaac gcgggtaaat cataatggcg tcgcagcgca aatccagcag atactgaatc
    21181 gcctggcgct cttcttcggc gctgtgttta ccatctgcca atagcaactg ccgccctttc
    21241 tcttccgcca ttcgcgcggc atgaaagagt aattcactaa aataaatgcc gtggtaaagc
    21301 gtgttggtca ctaccagccc cagcgtctga gtactcttcg ccgacagatt gcgcgccagc
    21361 aagtttgggc ggtaaccgct ctcttctacc gcctgaaaca cgcgatcttt agtctcctgg
    21421 ctgacgtagc cattacctga aagcacgcgg gaaacggtcg cttttgaaac cccggcgcgc
    21481 ttcgccactt ccagcatcgt cgtcatcatt ttcatccctt tacacgcaat caacgcagtg
    21541 tactgcaccg tttgccgatt gtccttgcgc aatcggcggg aaaaatattc aggtgaccgg
    21601 tttcacaaat ataaaaaatg aacaattaac cctcttgctt atttagtgac aactattcat
    21661 gattttgtga aaccggtttc ctaattccgt ttcagcatcg gcatttttcc gtcacgtcga
    21721 ctgataacaa ctacatctac cctactgata acaggataaa atccgatggc caaaaattat
    21781 gcggcgctgg cacgctcggt gatagcggca ctgggcggcg ttgataacat ctcggcagtc
    21841 acgcactgta tgacgcgttt gcgctttgtt atcaaagatg accagcttat cgacagcccg
    21901 acgttaaaaa ccatccccgg cgtgctcggc gtggtacgta gtgacaacca gtgtcaggtg
    21961 attatcggca ataccgtttc acaagccttt caggaagtcg tcagcctgct gccgggagat
    22021 atgcagcccg cacagcccgt aggtaaaccc aaactcacgc tacgtcgcat tggtgcgggg
    22081 atcctcgatg cgctgatcgg caccatgtca ccgctgatcc cggcgattat cggcggatcg
    22141 atggtcaaac tgctggcgat gatcctcgag atgagcggcg tgctgacaaa aggatcgccg
    22201 accttaacta ttctgaatgt gattggtgac ggtgctttct tcttcctgcc gctgatggtc
    22261 gcggcttcgg ccgccatcaa atttaaaacc aatatgtcgc tggcgattgc catcgcgggt
    22321 gtgctggtac atccgagctt tattgaactg atggcgaaag cggcccaggg tgaacatgtc
    22381 gaatttgccc tgatcccggt caccgcggtg aaatacacct acacagtgat cccggcgctg
    22441 gtgatgacct ggtgcctgtc atatatcgaa cgctgggtgg atcgcattac accggcggtg
    22501 accaaaaact tcctcaaacc aatgctgatt gtgttgattg ccgcaccgct ggcaatcctg
    22561 ctgattggcc cgattggtat ctggatcggt agcgccattt cggcgctggt ttacaccatt
    22621 catggttatc tgggctggct ttcagtcgcc attatgggcg cgctgtggcc tctgctggta
    22681 atgaccggga tgcaccgcgt ctttacgcca accatcattc agaccattgc cgaaaccggc
    22741 aaagaaggga tggtcatgcc gtcagagatc ggcgctaacc tgtcgctggg cggttcatca
    22801 ctggcggtgg cgtggaaaac gaaaaacccg gaactgcgcc agacggcgct ggctgcggcg
    22861 gcatcagcca ttatggcggg gatttccgaa ccggcgttat acggcgtggc gatccgcctg
    22921 aaacgtccgc ttatcgccag tcttatcagc ggttttattt gcggtgcggt tgccggtatg
    22981 gcggggcttg ccagccactc aatggcagcg ccggggctat ttaccagcgt gcagttcttc
    23041 gatccggcga atccaatgag catcgtctgg gtgttcgcgg tcatggcgct ggcggtcgtg
    23101 ctgtcgttta tcctcacact gttgctcggc tttgaggata ttcctgttga ggaagcggct
    23161 gccgaggcgc gaaagcatca gagcgtacaa ccgaccgtcg ccaaagaagt aagtcttaat
    23221 tgaggatgaa aatgtcagta tttccagaag gttttttatg gggcggcgcg cttgccgcca
    23281 accagtctga aggtgcgttc cgtgaaggtg gcaaaggact gacaacggtc gatatgatcc
    23341 cacacggcga gcatcgaatg gcggtgaaac tggggctgga aaaacgtttt cagttgcgcg
    23401 atgacgagtt ttatcccagc catgaggcga cggattttta tcatcgttat aaagaagata
    23461 tcgccctgat ggcagagatg ggattcaaag tgttccgtac ctcaattgcc tggagccgcc
    23521 tcttcccgca gggcgatgaa ctgacgccca accagcaggg cattgctttt taccgttctg
    23581 tctttgaaga gtgtaaaaag tatggtatcg aaccgctggt cacgttgtgc cacttcgatg
    23641 tgccgatgca tctggtcacc gaatatggct cctggcgtaa ccgcaagctg gtggagcttt
    23701 tcagccgcta cgcccggacc tgctttgaag catttgatgg tctggtgaaa tactggctaa
    23761 ccttcaatga aatcaacatt atgttgcata gcccgttctc cggcgcgggt ctggtgtttg
    23821 aagaaggtga aaatcaggat caggtgaaat atcaggccgc gcatcaccag ctggttgcca
    23881 gtgcgctagc caccaaaatc gcccatgagg ttaacccgca aaatcaggtg ggctgtatgc
    23941 tggcgggcgg taacttctac ccttacagtt gcaagccgga agatgtctgg gcggcgctgg
    24001 agaaagaccg ggaaaacctg ttttttatcg atgtgcaggc gcggggcgcg tatccggctt
    24061 actctgcccg cgtattccgc gaaaaagggg taaccatcga caaagcaccg ggcgatgatg
    24121 aaatcctgaa aaacaccgtc gattttgtct ctttcagcta ttacgcctcg cgctgcgcct
    24181 cggcggagat gaacgccaac aatagcagtg cggcgaacgt agtgaaatcg ctgcgtaacc
    24241 cgtatctgca agtgagcgac tggggctggg gtattgatcc actcggtctg cgtatcacca
    24301 tgaacatgat gtacgaccgt tatcagaagc cgctgtttct ggtggaaaac ggcctcggcg
    24361 caaaagatga acttgctgcc aatggcgaga ttaacgatga ctatcgcatc agctatttac
    24421 gcgaacatat ccgcgcaatg ggcgaagcga ttgcagatgg cattccgctg atgggctaca
    24481 ccacctgggg ctgtattgat ttagtttccg cctctacggg tgaaatgagc aaacgctacg
    24541 gttttgtcta cgtagaccgt gacgacgcag gcaacggcac gctgacgcgc acgcgtaaga
    24601 aatcgttctg gtggtataaa aaagtaattg ccagtaatgg ggaagattta gagtaagtaa
    24661 ccgtgccgga tgcggcgtga acgccttatc cggcctacat agttcgtgcg acatgtaggc
    24721 ccgataagcg cagcgcatcg ggcaatctgg ggtttggcat cagtcaaaat caaagaaacc
    24781 attccggctt aacgccaaat cgggctgaaa gtgccttaat gtgggatatt gtcagggatc
    24841 gttgtccaga caaaatctga ctgaccaggg atttagagcc gatttcgttc ttcaaatccg
    24901 cataggtcag attatgttga tcaatcaacg tgcgaagtaa cgccacgcca accggcattg
    24961 ccgcaacggc tttgtcgaac tctgcaaact tttcgttgtt gttttcatac tctgcaatgc
    25021 ggctcgccag aaagtcgata agtggattgg tgtcatcttc ttcaatcaaa tattcgacca
    25081 gttccagtgc ttcacgataa tcatcttctg agtcactgcc tcccagaaag gggactgcat
    25141 tgaccagttc tcttgttgct ttaacagcgc gtgcagcatt agcagtcatt ctttgttctc
    25201 tctgtagtaa cgtgacgtct gtctgcacgt aatccccctc atagccactc tgcaaaaagt
    25261 cagttctggt tcaccccata aagcacatcc ccctttatca agcaacgctg cgtctgcgcc
    25321 agatcttccg tttgcgggtc gcgcccggcg atgggtttga ggacgagttt acggttgggg
    25381 gtataagtaa aacgcgtgag cgcgggatag cttaacttgc caaaccagcc gtgaacacgc
    25441 tgccatttgg cgtcttttac ctgatacaga ctggttatcc agtaaccgga atcaaactgc
    25501 atatccagca attgcgtgtg gccattcctt tgtaaatcca gcaaatcatc aatgccagtt
    25561 tcacttgcgg tataaaaacc atcggactga aaaacacacg ggcgaccttg ctgattaaag
    25621 gtcatcagaa tcaaaaacgc gttaggtgcc agaccatttc ctgaaatacc ccgccagata
    25681 accagatcct gaatgccgtt acgatcaaga tcggcacggt aaagttgcgc attacccgcc
    25741 atattttgca gcccccccac aggcacagac caggatttac cggcgcgatc tttaccgttc
    25801 aattgccatt cactatcatc atttggcatc ttttcaagcg tcacgccagc aacgccgact
    25861 tttctaaaat gccagttttg ctcggcatca taaggcatgg tcaggagagg tttcagcgcc
    25921 cgcttttgcg cgtattcgct gtcactcatc ggcagatatt cggtaaagct ggtggcctgt
    25981 gcaggcagca ctaagctcaa taaaaaagcg cacatccctg ttctgatgtt caattccctg
    26041 aattccttaa tgaaaaacta ctctacttcc accgctaact gcgcaaatcc accatttcct
    26101 tcccagcctt ccagtcgttg ataaacggtt tcaaccgcat ctttaatcgg ctgggtcatc
    26161 gggtagtaaa agccgacgat atccggctgg atgccgagga aaatcacttc gccaatatct
    26221 tctttcaact ggtcgataag gtagttcaac ggcatgttat gggtagtcat cataaacatc
    26281 tcggcgatat catccgggtc gatgatgcgg atctcgccgg ggtttagccc catatcagtg
    26341 gcgtcgacaa tcagcagtcg cgtagggcgc agttcacgga tggcgacgat gtcgttttcc
    26401 ggtgcactac cgccgtcaat caccacccag ttacctttcg gcgcggcggc gcacttttcc
    26461 gccagcagcg ggcctgcgcc atcatcgccc atcatgctat tgccaacaca gagtaaaacg
    26521 tcagtcacgc agtctcctca ccatcaaata gatggcgttt tcctgatgaa tatcatgcag
    26581 catacttagc agcattgtac tccattcctg ctgctgcgaa gtttgcgctg cccgggcttt
    26641 atcgaatgcg ttggccagca tcggcacatg gttaatgtcg atgacgatct caccatattt
    26701 cggcacgcct tccattttgc ggcgggcttc gctgcccgcc tccagagtgg caatccatgc
    26761 cagatattca tcccacgggc aggtgagcgc cgcttccagg caatcgataa ccccaaggtg
    26821 gtgaccaatc gccaggctgt aatagaccac ctgctgcgcc tcggcgggcg tggcatcgtt
    26881 ctcatcaata aatttacggc tcagttgact gaacaccacc ttttcactca tcggatacgc
    26941 gcctcttcta caacatgatt cagatggctg acaatctcgt tcagacgcgg atcgttttcc
    27001 gcttccagcc agcgtgcaac ctgttcttcg ccctgcccta actgtgtcag gaagtcatcg
    27061 gcaatctgac gaccgtaacg ataacctgcc aggcggcgtg cttcgcgatc cactttcaca
    27121 cgcagcggct gcaccatatc gccatgcagg atttccgccg gttgttcatc ctgctcaccc
    27181 gggccacggg cgtgaatttt ctgctccagc aggccgagcg ccattgcaaa gccgtacagc
    27241 gtggcggcag gcgttggcgg gcaaccaggg atgtagacat ctaccgggac gattttatcc
    27301 gtaccgcccc acacgcagta gagatcgtgg aagatcccgc cactgttacc gcaggcaccg
    27361 taggagatac agattttcgg gtccggcgcg gactgccacg cacgcagcgc aggggatcgc
    27421 attgcacggg tgaccgcgcc ggtaaacagt aaaatatccg catgacgcgg tgaaggaacg
    27481 actttaatgc cgaagcgttc tgcatcaaac agcggcgaaa gcgtggcgaa aatttcgatt
    27541 tcgcagccgt tgcagccgcc gcagtccacg cggtaaacgt aggcagaacg tttgattttt
    27601 ttcagtaacg acgccttcat gctggcgatg gattcatcca ccgtcatcgg gaccggaatg
    27661 ccgttggcgt cacgggggcc taataaattg ctcatcagat ggcctctttc atatggcgag
    27721 tcagttcaat acggtcggac ggcaccaggc atttctggcg cttacattcc gggcaagtct
    27781 caaagctttc gcggtggttt tccgcgcggc tgtcaccatt gtgcttaagc agcgcaatgg
    27841 cgtagtcgat ctctttctgg acggcgaaag gacgattgca gacgcgacag ctgcacagca
    27901 caaaacggga ctgttgcagg aaatcttctt tcttccacac cgccagttcg tactcttgcg
    27961 acagtttgat cgctgccgtc gggcagactt cttcgcagcg tccacagaag atgcagcgcc
    28021 cgagattaaa ctcccacgca agctctcctg tggcgaggtc agcttcaacc gttaaggcgt
    28081 ttgacgggca ggcattgacg caggccgcgc agccgatgca ctgctgcggg ttctgctctg
    28141 gcttaccacg gaagttttta tcaaccgcaa tcggctccag cggataagac gaggtcgccg
    28201 tgccggtttt gatgactttt ttgataaagg taaacatggc gattccttat ttcagcggcg
    28261 agtttttacg ctcaatgctg taacgctcga gttctttgta cggcaccact ttgctcttct
    28321 tcttacgcac atcgaccacg gtcatgcggt cggtacagga gtagcaaggg tccaggctac
    28381 cgataatcag cggcgcatcg gaaacggtat tgccacgcag catgtagcgc agggtcggcc
    28441 agttcgcgta ggtcgcggca cggcagcgcc agcggtacag cttctggttg tcgccggtca
    28501 tgctccagtg gatatcgtcg ccgcgcggcg cttcggcaaa gcccagcgcg aaacggtgcg
    28561 gaatgtaggt aaagccttcc accatcagcg gaccacccgg caagttatcc agaccgtagt
    28621 cgatcatgtt cagcgcggta tagacttcgt tgatacgcac tttcagacgg gaaataacgt
    28681 cgcagccctg ctcgctgtgg acttccattg gcagcaggcc ataaccaaca aacgggtgat
    28741 cggcgcgggt atcgcgagcg tgtccgctgg cgcggaccat cgggccaacg ttactgaaat
    28801 cgcgggcaat ttccgggtcc agacgaccaa tgccgacggt gcgctgttcc atgttcggcg
    28861 tactcagcag cacatccacc agctcctgca cttcacgacg catctgttgc gccagctggc
    28921 gggtctggat catgtcatct ttcagcagat cgcgacgaat cccgccgatc aggttcaggc
    28981 cgtaggtttt acgcgcaccg gtaaggatct ctgccatttt catggaggtt tcacgcacgc
    29041 ggaagaactg cataaagccg gagtcgaagc cggtaaagtg acaggccagg ccgaggttga
    29101 gcagatgcga gtgcaggcgt tccacctcca gcagaatggc gcggatcatc tgcgcacgtt
    29161 ctggcacctg aatacccatc gcgttttcca ccgacgtggt gtaggcggtg ctgtgagcaa
    29221 agccgcagat cccgcacaca cggtcagaga ggaaggtcac ttcgttgtaa cccatacggg
    29281 tttccgccag tttttccatg ccgcgatgga cgtagaacag gcggtagtcg gcgtcgataa
    29341 tgttttcgcc atcgacgaac agacggaagt gccccggttc gtcagaagtg acgtgcagcg
    29401 gaccaatcgg cacgacgttg tttttcttgt cgcccagttc gttgatgaac tcgtaggttt
    29461 cagcatcggt ggtcggtgcc ggacgctgac gataatccat gctgtctttg cgcagcggat
    29521 aaagttcatc cggccagtca tccggcagca ccagacgacg ttcatccggc agaccaaccg
    29581 gaatcaaacc gtacatatcg cgcacttcac gctcgcccca caccgcagcc ggaacgcgcg
    29641 gcgtcacgga aggatactcc ggtttgttgg cgtcaacttc gacacgaacc gttacccaac
    29701 acttggtgcc cttctccatc gacagcacgt aataaacggc gtaatgacca ttcagtttgc
    29761 gttcgtcgtt accaaaaagc accgacagcc agcccccctg cttgtagtag agaaactcca
    29821 ccacttccgg cagatagttc acctttacgg tgacagtcag ctgatctttg gtctgccagg
    29881 cgtggtccag cacgacgccc ggaaatgcct cattcagcgc ggcgagataa tgttgaccta
    29941 atttttcttc agacatgctc aaactctctt taatcacgcc gccagcaagg agacgaacgc
    30001 taaaaatgca aagccaaacc cagcccaggt aatgcgcgga gtaatatcaa gacgcagacg
    30061 ggccatgctg ttttcgaaca gcgcgataac caggacgccg accaccagtt tgacgatggc
    30121 aatcaccagc gccagcagca gtccaccagc ggtgaaggtt tccatttgtc cccacggaat
    30181 aaacaccccg acgaacatct gcagcaccac caactgtttc aggctgatac cccatttcat
    30241 gacgccaaag ccgctgccgc tgtactcaga gagcggacct tcctgcaact cctgctcggc
    30301 ttccgccagg tcgaacggca gtttgcccat ttcgataaag gtggcgaatg cacaggcaca
    30361 gagcgccagc accagcggga tgctctggct cagcggccag tgataaacgg tgtcggtgat
    30421 gttgctgatg ttggtggaac cggcaacctg tgcggcaacc cacagaccaa gcagcagcat
    30481 cggttcgacc agcacgccaa gcatcgcttc acggctcgcg ccgatagcag taaacgggct
    30541 accggtatcc agaccggaaa tagcaaagaa gaaacgcgcg atggcaaaga gatacagtaa
    30601 ggtgatcaaa tcgcccagtt gcggcagcgg agaaccgacg gtcaccaccg gcagcgcagt
    30661 agcgatagtc agcatgacgc ccaccatcac atacggcgtc aggcggaaca cccagccgga
    30721 ggcatccggg ccaacgctct ggcggcccag cagtttgaaa atgtcacgat actcctgcaa
    30781 cacacccggc ccacgacggt tatgcagacg ggcgcgcgcc acgcgggtaa taccggagag
    30841 cagcggcgca acggcaaata acaccagcgc ctgaattaac ggatataaaa cactcattct
    30901 caggctcctc gtgaaacaat aatcaccacc agtaccgcca gttcaaccag cgccatccgg
    30961 cggaacagca acgcactacc ttcgcactgc cagcccggca ccagcgacac cggattcagc
    31021 catttgcgca gtttcagcac tggcgcaaac gcctgtttca ccggcatggc aaaaccgtga
    31081 gcggtaatca ccattgattt ttcatggtcg tagccgcaca cccaggccgc accgcgggaa
    31141 cgtgacggca ggcggtcgcc tttgcaaatc gccataatga tgaatggcag cagcgggcag
    31201 gcaatcagca gcaatgtgat cattggttga gaaacggtgg tgttagcagg ctccagaggc
    31261 agaggtacag cagcagagag catcggcagc agccacggcg cagcaacacc gccaattacg
    31321 cagcaaatcg ccagtgccac tacgcttacg ctcatcagga gcggcgcaca ggtggcgttt
    31381 tcggcttctt tggtacgcgg cgcgccgagg aacgtgacgc catagacttt cgccatacac
    31441 atcaccgcca gcgcaccggt aattgccaga cccacagcga gcagcggccc cagcagacgg
    31501 gcaacaaacg cgccgctatt gctcagtttg aagaaggatt gatagataac ccattccccg
    31561 gcaaacccgt tcagcggcgg cagcgcagcc attgccatta acccgactaa catggcgatg
    31621 gagataaccg gcattttctt gccaatacca ccgagttttt cgatatcgcg atgaccggta
    31681 cggaaccaga cgctccccgc tccgaggaac agtacgcttt tgaacaggct atggttaagc
    31741 agatggtaca gaccaccgac caggccaaga gcaatcagtg ccggttgttc gagcgcgata
    31801 cccgttacgc cagcgcccag ccccagcaga ataatgccga tattttccag ggtgtggtaa
    31861 gccagcaggc gctggatgtt gtgttccatc aacgcataca gaccaccgac gaacgcggtg
    31921 atcatgccga gcaccagcag cgcgatcccc caccacagcg gtgcattacc gccaagcagt
    31981 gacagggtta acatgcccag caggccaatt ttcatgacta ccgtagaaaa caacgcggca
    32041 gctggcgcag aggcgttagc atgtgcctgc ggcacccagc cgtgcagcgg aataatcccg
    32101 gccagcaggc caaagccaat cacaccgagc agccagatat cggaaccgag cggcagctgt
    32161 tgcatacgca tatccagcag gcgcagatcc agcgtgccat aacgctgcca cagcagccag
    32221 caagcaatcg ccagcagcag agtgccaaga cgccccagcg caaaccacag tttgccctct
    32281 ttgctgttgc tggtaaggaa caccgcacac aaggccatga cttcagccat taccacgaac
    32341 atgccgaggt tgctggcgat gacggcgcag acggcggcag ccatcaacat attgatctgc
    32401 aagccgttgc acttcacctg cgcgtggcga tgccagtcaa tgttgtagag gctgacaaac
    32461 agaccgcaca gaccgagcgt aatcagccaa atcgcgttaa gcggagagat ttgcacatcg
    32521 tagcttacca gcgacagcgc accgctcacg ccaaccgcgc cagtcagcac agtaaagccc
    32581 gcggctgccg tatacaggct accaaccgcg ccgccaattc cggctatcca gccgcttagc
    32641 gccttttgaa aagaaaagag aaatgccaga acagcggcgg cgacaaacca cgccacgccg
    32701 ctattgatca gggaaattgc gctcatttag cctctccact ttgagcctgc tgaaacaagg
    32761 tgagatcgcc aaagtccgtg ttaaaggtca gctcacgctt acgtttgcta acgcgggcga
    32821 tatcggtgtt atccaccaga tgcagggctt tggtcgggca catccgcacg caggccggac
    32881 cttgttcatc aaagctacaa aggtcacatt tgacggcgat cgcgcgaata cccggcaccc
    32941 agtcaagcag cgtactgata cgcgccggag caggcggtgc cggtggcgct ttcggggtat
    33001 tggcatttgc aggaatatcc agcggacggc tgccggaaaa ttcaattgcg ccaaacgggc
    33061 aggcgatgcc gcacagcttg cagcttacgc acaggctttc attcaactgc acggccccat
    33121 caacgcgggt gatggcgtta accgggcaga ccaccgcgca gggtgcatct tcacagtggt
    33181 gacagagctg cggcgcagat tctttttcat tcagcatcac tctcaggcgc ggcattgatt
    33241 gcaggccgtg ctggcgatgc gtctctgaac aggcggcctc acaagtgtgg cagccgatac
    33301 agagcgtgga gtcagcaatt acaaaacgat tcaccaggca ttcctcaggt gattgtcatt
    33361 tttgacgaaa acatgccgat gaaatgtcat tttcgacact catcgacacg cccatcccca
    33421 aacaggcgta acgcctgcaa aacgggcaaa gcctcagctc atgctgccgg gctttgtccc
    33481 tttaccagtt ggcttaaatt caccggcaca ttgttttcaa tggcggtgta taagctgtcg
    33541 taaacgccag cgattttttc gagatagtgt tccagaacct gttcgcgatc gcggatgttg
    33601 accttgccat caatcatgcc gtcaatgctc agttgcgcct gcgcaatccg ctgtttgtct
    33661 tcgccatctt ttgtttcgac gtaatactcg atggtgtggc tgttaaagcc atccgccagg
    33721 gtgacgtaaa tacgaaaatg ttcaaaaagg acgaaacaga gttctttgtc cggcgcgcag
    33781 ctcatggcgt gatgcaggcg cgctttcgat aacgtgatcc cctgaaccag cgaattgcag
    33841 tagatgtgcc actggtcctg taggcgacga tgccgctgtg cgatgtaatc ggctttctcg
    33901 cttatttccc aaatagtcat tgtcaggtta cccgtttaac agagatgcca gctttaagca
    33961 ttttttgtgc caacttttaa tttattgtta ttaaagagat ttttaagata aagatgaatt
    34021 tcgtcgccgt gtcgacgtgt catttcgaca tcatcgacat tattcaccgc agggataatc
    34081 aacactggca caattattgc ttgtagctgg caatagttaa tgggaggcga tatgcacgaa
    34141 ataaccctct gccaacgggc actggaattg atcgaacagc aggccgcaaa acacggcgca
    34201 aaacgcgtaa ctggggtctg gctcaaaatt ggcgcatttt cttgtgtcga aaccagctct
    34261 cttgcctttt gttttgatct ggtttgccgc ggcagcgtgg cggaaggttg taaactgcac
    34321 ctcgaagaac aagaggccga atgctggtgt gaaacatgcc aacagtatgt gacgctactg
    34381 acccagcgcg tccgccgctg tccacagtgt catggtgaca tgctacagat tgtggcagac
    34441 gacggtttac agattcggcg gatagaaata gaccaggagt gagcgatgtg tacaacatgc
    34501 ggttgcggtg aaggcaacct gtatatcgag ggtgatgaac ataaccctca ttccgcgttt
    34561 cgtagcgcgc catttgcccc ggcggcacgc ccgaagatga aaatcaccgg cattaaagcg
    34621 cctgaattta cccccagcca gactgaagaa ggcgacctgc attacggtca tggcgaagcg
    34681 ggcactcacg cgccgggcat gagccagcgt cggatgctgg aagtcgaaat tgacgtgctg
    34741 gacaaaaata accgtctggc tgaacgcaac cgcgcgcgct ttgctgcccg caagcaactg
    34801 gtgctcaacc tggtttccag ccctggttcc ggtaaaacca ccctgctgac ggaaacctta
    34861 atgcgcctga aagacagcgt tccgtgcgcg gttattgaag gtgaccagca aaccgtgaac
    34921 gatgccgcac gcattcgcgc taccggcaca ccagcgattc aggtgaacac cggtaaaggc
    34981 tgccatcttg acgcacagat gattgccgac gccgcaccgc gtctgccact ggacgataac
    35041 ggtattctgt ttatcgaaaa cgttggcaac ctcgtatgcc cggccagctt cgatctcggt
    35101 gaaaaacaca aagtggcggt gctttccgtt accgaaggtg aagacaaacc gctgaaatat
    35161 ccgcatatgt ttgccgccgc ctcgctgatg ctgctcaaca aagttgacct gttgccgtat
    35221 ctcaactttg acgttgaaaa gtgcatcgcc tgcgcccgcg aagtcaatcc agaaattgaa
    35281 atcatcctta tttccgccac cagcggtgaa gggatggacc agtggctgaa ctggctggag
    35341 acacagcgat gtgcataggc gttcccggcc agatccgcac cattgacggc aaccaggcaa
    35401 aagtcgacgt ctgcggcatt cagcgcgatg tcgatttaac gttagtcggc agctgcgatg
    35461 aaaacggtca gccgcgcgtg ggccagtggg tactggtaca cgttggcttt gccatgagcg
    35521 taattaatga agccgaagca cgcgacactc tcgacgcctt acaaaacatg tttgacgttg
    35581 agccggatgt cggcgcgctg ttgtatggcg aggaaaaata atgcgttttg ttgatgaata
    35641 tcgcgcgccg gaacaggtga tgcagttaat tgagcatctg cgcgaacgtg cttcacatct
    35701 ctcttacacc gccgaacgcc ctctgcggat tatggaagtg tgcggtggtc atacccacgc
    35761 tatttttaaa ttcggcctcg accagttact gcctgaaaac gttgagttta tccacggtcc
    35821 gggttgcccg gtgtgcgtac tgccgatggg tagaatcgac acctgcgtgg agattgccag
    35881 ccatccggaa gtcatcttct gtacctttgg cgacgccatg cgcgtaccag ggaaacaggg
    35941 atcgctgttg caggcaaaag cacgcggtgc cgatgtgcgc atcgtttact cgccgatgga
    36001 tgcgttgaaa ctggcgcagg agaatccaac ccgcaaagtg gtgttcttcg gcttaggttt
    36061 tgaaaccacc atgccgacca ccgccatcac tctgcaacag gcgaaagcgc gtgatgtgca
    36121 gaatttttac ttcttctgcc agcatattac gcttatcccg acgcttcgca gtttgctgga
    36181 acagccggat aacggtatcg acgcgttcct cgcgccgggc cacgttagta tggttatcgg
    36241 cactgatgcc tataatttta tcgccagcga ttttcatcgt ccgctggtgg tggctggttt
    36301 cgaaccgctt gatctactgc aaggcgtggt catgctggtg gagcagaaaa tagcggccca
    36361 cagcaaggta gagaatcagt atcgtcgggt ggtaccggat gccggtaacc tgctggcgca
    36421 acaggcgatt gccgatgtgt tctgtgtcaa cggcgacagc gaatggcgcg gcttaggcgt
    36481 gattgaatct tctggtgtac acctgacgcc agattatcaa cgattcgatg ccgaagcgca
    36541 tttccgcccg gcaccgcagc aggtctgcga tgacccgcgc gcacgttgtg gtgaagtatt
    36601 aacgggcaaa tgtaagccgc atcaatgccc gctgtttggt aacacctgta atcctcaaac
    36661 cgcatttggt gcactgatgg tctcctccga aggagcgtgc gccgcgtggt atcagtatcg
    36721 tcagcaggag agtgaagcgt gaataatatc caactcgccc acggcagcgg cggccaggcg
    36781 atgcagcaat taatcaacag cctgtttatg gaagcctttg ccaacccgtg gctggcagag
    36841 caggaagatc aggcacgtct tgatctggcg cagctggtag cagaaggcga tcgtctggcg
    36901 ttctccaccg acagttacgt cattgacccg ctgttctttc ctggcggtaa tatcggcaag
    36961 ctggcgattt gcggcactgc gaatgacgtt gcggtcagtg gcgctattcc gcgctatctc
    37021 tcctgtggct ttatcctcga agaaggattg ccgatggaga cactgaaagc cgtagtgacc
    37081 agcatggcag aaaccgcccg cacggcaggc attgccatcg ttactggcga tactaaagtg
    37141 gtgcagcgcg gcgcggcaga taaactgttt atcaacaccg ctggcatggg cgcaattccg
    37201 gcgaatattc actggggcgc acagacgcta accgcaggcg atgtattact ggttagcggc
    37261 acgctcggcg accacggggc gactatcctt aacctgcgtg agcagctggg gctggatggc
    37321 gaactggtca gcgactgcgc ggtactgacg ccgcttattc agacgctgcg tgacattccc
    37381 ggcgtgaaag cgctgcgtga tgccacccgt ggtggtgtga acgcggtagt tcatgagttc
    37441 gcggcagcct gcggttgtgg tattgaaatt tcagaagcgg cactgccggt taaacctgcc
    37501 gtgcgcggcg tttgcgaact gctgggactg gacgccctta actttgccaa cgaaggcaaa
    37561 ctggtgatcg ccgttgaacg caacgcggca gagcaagtgc tggcagcgtt acattcccat
    37621 ccactgggaa aagacgcggc gctgattggt gaagtggtgg aacgtaaagg tgttcgtctt
    37681 gccggtctgt atggcgtgaa acgaaccctc gatttaccac acgccgaacc gcttccgcgt
    37741 atatgctaat aaaattctaa atctcctata gttagtcaat gaccttttgc accgctttgc
    37801 ggtgctttcc tggaagaaca aaatgtcata tacaccgatg agtgatctcg gacagcaagg
    37861 gttgttcgac atcactcgga cactattgca gcagcccgat ctggcctcgc tgtgtgaggc
    37921 tctttcgcaa ctggtaaagc gttctgcgct cgccgacaac gcggctattg tgttgtggca
    37981 agcgcagact caacgtgcgt cttattacgc atcgcgtgaa aaagacaccc ccattaaata
    38041 tgaagacgaa actgttctgg cacacggtcc ggtacgcagc attttgtcgc gccctgatac
    38101 gctgcattgc agttacgaag aattttgtga aacctggccg cagctggccg caggtgggct
    38161 atacccaaaa tttggtcact attgcctgat gccactggcg gcggaagggc atatttttgg
    38221 tggctgtgaa tttattcgtt atgacgatcg cccctggagc gaaaaagagt tcaatcgtct
    38281 gcaaacattt acgcagatcg tttctgtcgt caccgaacaa atccagagcc gcgtcgtcaa
    38341 caatgtcgac tatgagttgt tatgccggga gcgcgataac ttccgcatcc tggttgccat
    38401 taccaacgcg gtgctttccc gcctggatat ggacgaactg gtcagcgaag tcgccaaaga
    38461 aatccattac tatttcgaca ttgacgatat cagtatcgtc ttacgcagcc accgtaaaaa
    38521 caaactcaac atctactcca ctcactatct tgataaacaa catcccgccc acgaacagag
    38581 cgaagtcgat gaagccggaa ccctcaccga acgcgtgttc aaaagtaaag agatgctgct
    38641 gatcaatctc cacgagcggg acgatttagc cccctatgaa cgcatgttgt tcgacacctg
    38701 gggcaaccag attcaaacct tgtgcctgtt accgctgatg tctggcgaca ccatgctggg
    38761 cgtgctgaaa ctggcgcaat gcgaagagaa agtgtttacc actaccaatc tgaatttgct
    38821 gcgccagatt gccgaacgtg tggcaatcgc tgtcgataac gccctcgcct atcaggaaat
    38881 ccatcgtctg aaagaacggc tggttgatga aaacctcgcc ctgaccgagc agctcaacaa
    38941 tgttgatagt gaatttggcg agattattgg ccgcagcgaa gccatgtaca gcgtgcttaa
    39001 acaagttgaa atggtggcgc aaagtgacag taccgtgctg atcctcggtg aaactggcac
    39061 gggtaaagag ctgattgccc gcgcgatcca taatctcagt gggcgtaata atcgccgcat
    39121 ggtcaaaatg aactgcgcgg cgatgcctgc cggattactg gaaagcgatc tgtttggtca
    39181 tgagcgtggg gcttttaccg gtgccagcgc ccagcgcatt ggtcgttttg aactggcgga
    39241 taaaagctcc ctgttcctcg acgaagtggg cgatatgcca ctggagttac agccgaagtt
    39301 gctgcgtgta ttacaggaac aggagtttga acgtctcggc agcaacaaaa tcattcagac
    39361 ggatgtgcgt ctaatcgccg cgactaaccg cgatctgaaa aaaatggtcg ccgaccgtga
    39421 gttccgtagc gatctctatt accgcctgaa cgtattcccg attcacctgc cgccactacg
    39481 cgagcgtccg gaagatattc cgctgctggc gaaagccttt accttcaaaa ttgcccgtcg
    39541 tctggggcgc aatatcgaca gcattcctgc cgagacgttg cgcaccttga gcaatatgga
    39601 gtggccgggt aacgtacgcg aactggaaaa cgtcattgag cgcgcagtat tgctaacacg
    39661 cggcaacgtg ctgcagctgt cattgccaga tattgtttta ccggaacctg aaacgccgcc
    39721 tgccgcaacg gttgtcgccc aggagggcga agatgaatat cagttgattg ttcgcgtgct
    39781 gaaagaaacc aacggcgtgg ttgccgggcc taaaggcgct gcgcaacgtc tggggctgaa
    39841 acgcacgacc ttgctgtcac ggatgaagcg gcttggaatt gataaatcgg cattgattta
    39901 actgcaaatt gccggacaga tctgcctgtc cggcatacta ttcacgagtt tttttcggac
    39961 gatatttttc cggcagttct ggcaccggac gcttgtcatc gatgagatga cgcacggtta
    40021 agatcggatg acgccacagc attcgcggcc cggcccaacg cataatctgt ttcatctctt
    40081 cacgctttgc tggctggtaa cagtgcaccg gacactgctt acaggctggt ttctcttcgc
    40141 cgaacacaca tttatccagc cgcttttgcg cgtaaacaaa caacgcctcg taatgctccg
    40201 gctccgctga cgcctgcggg catttcgctt gataaagatc gatcattttt ttaatcgtca
    40261 gtttttcacg agagatacgc ttgccggaca tgctgcctcc atactcttaa ggtgtattta
    40321 tattacaact taatttgaaa ggggactatg gctctgaagg aggaggttta ttcaaccgac
    40381 gcaattttgc gtacttgctt cataagcatc acgcaaaagc tgcaaaacag catctttccc
    40441 ggaaccagca tcaagaactc gccgttcgct tcttcccctg aaatgattaa ctccggtatc
    40501 atgtgcgcct tatgtgatta caacgaaaat aaaaaccatc acaccccatt taatatcagg
    40561 gaaccggaca taaccccatg agtgcaatag aaaatttcga cgcccatacg cccatgatgc
    40621 agcagtatct caagctgaaa gcccagcatc ccgagatcct gctgttttac cggatgggtg
    40681 atttttatga actgttttat gacgacgcaa aacgcgcgtc gcaactgctg gatatttcac
    40741 tgaccaaacg cggtgcttcg gcgggagagc cgatcccgat ggcggggatt ccctaccatg
    40801 cggtggaaaa ctacctcgcc aaactggtga atcagggcga gtccgttgcc atctgcgaac
    40861 aaattggcga tccggcgacc agcaaaggtc cggttgagcg caaagttgtg cgtatcgtta
    40921 cgccaggcac catcagcgat gaagccctgt tacaggagcg tcaggacaac ctgctggcgg
    40981 ctatctggca ggacagcaaa ggtttcggct acgcgacgct ggatatcagc tccgggcgtt
    41041 ttcgcctgag cgaaccggcc gaccgcgaaa cgatggcggc agagctgcaa cgcactaatc
    41101 cggcggaact gctgtatgca gaagatttcg ccgagatgtc gctgattgaa ggccgtcgcg
    41161 gcctgcgccg tcgcccgctg tgggagtttg aaatcgacac cgcgcgccag cagttgaatc
    41221 tgcaatttgg cacccgcgat ctggtcggtt ttggcgtcga gaacgcgccg cgcggacttt
    41281 gtgctgccgg ttgtctgttg cagtatgcga aagataccca acgcacgacc ctgccgcata
    41341 ttcgttctat caccatggaa cgtgagcagg acagcatcat tatggatgcc gcgacacgtc
    41401 gtaacctgga aattactcag aacctggcgg gcggtgcgga aaatacgctg gcttctgtgc
    41461 tcgactgcac cgtcacgccg atgggtagtc gtatgctgaa acgctggctg catatgccag
    41521 tgcgcgatac ccgcgtgttg cttgagcgcc agcaaactat tggcgcattg caggatttca
    41581 ccgccgagtt gcagccggta ctgcgtcagg tcggcgacct ggaacgtatt ctggcacgtc
    41641 tggctttacg aactgctcgc ccacgcgatc tggcccgtat gcgccacgct ttccagcaac
    41701 tgccggagct gcgtgcgcag ttagaaactg tcgatagtgc accggtacag gcgctacgtg
    41761 agaagatggg cgagtttgcc gagctgcgcg atctgctgga gcgagcaatc atcgacacac
    41821 cgccggtgct ggtacgcgac ggtggtgtta tcgcatcagg ctataacgaa gagctggatg
    41881 agtggcgcgc gctggctgac ggcgcgaccg attatctgga gcgtctggaa gtccgcgagc
    41941 gtgaacgtac cggcctggac acgctaaaag ttggctttaa tgcggtgcac ggctactaca
    42001 ttcaaatcag ccgtgggcaa agccatctgg cccccatcaa ctacatgcgc cgccagacgc
    42061 tgaaaaacgc cgagcgctac attattccag agctaaaaga gtacgaagat aaagttctca
    42121 cctcaaaagg caaagcactg gctctggaaa aacagcttta cgaagagttg ttcgacctgc
    42181 tgttgccgca tctggaagcg ttgcaacaga gcgcgagcgc gctggcggaa ctcgacgtgc
    42241 tggtgaacct ggcggaacgg gcctataccc tgaactacac ctgcccgacc tttattgata
    42301 aaccgggcat tcgcattacc gaaggtcgcc atccggtagt tgaacaagta ctgaatgagc
    42361 catttatcgc taacccgctg aatctgtcgc cgcagcgccg tatgttgatc atcaccggtc
    42421 cgaacatggg cggtaaaagt acctatatgc gccagaccgc gttgattgcg ctgatggcct
    42481 atatcggcag ctacgtaccg gcgcaaaaag tcgagattgg cccgattgac cgtatcttta
    42541 cccgcgtagg cgcggcagat gacctggctt ccgggcgctc aacctttatg gtggagatga
    42601 ctgaaaccgc caatatttta cataacgcca ccgagtacag tctggtattg atggatgaga
    42661 tcgggcgcgg gacgtccact tacgatggtc tgtcgctggc atgggcatgc gcggaaaatc
    42721 tggcgaataa gattaaggca ttgacgctgt ttgctaccca ctatttcgag ctgacccagt
    42781 taccggagaa aatggaaggc gtcgccaacg tgcatctcga tgcactggag cacggcgaca
    42841 ccattgcctt tatgcacagc gtgcaggatg gcgcggcgag caaaagctac ggcctggcgg
    42901 ttgcagctct ggccggcgtg ccaaaagagg ttattaagcg cgcacggcaa aagctgcgtg
    42961 agctggaaag catttcgccg aacgccgccg ctacgcaagt ggatggtacg caaatgtctt
    43021 tgctgtccgt accagaagaa acttcgcctg cggtcgaggc actggaaaac ctggacccgg
    43081 attcactgac tccgcgtcag gcgctggagt ggatttatcg cttgaagagt ctggtgtaat
    43141 aacaactccc gatagtcttt tgctatcggg aatattaacg acaactgacg aatcaaataa
    43201 aaataccctg tataatagga aagcttattt tacagggtca aaccatgcca tctacacgct
    43261 atcaaaaaat caatgcccat cactatcgcc atatatgggt cgttggtgat attcatggtg
    43321 aatatcagtt attacaatcc cgcttacatc aactctcttt tttccccgaa accgacttac
    43381 ttatttcggt aggcgataac atcgatcgtg ggccggagag tcttgacgtc ctgcgcctgc
    43441 taaaccagcc ctggtttatc tccgttaaag gcaaccacga agcaatggcg ctggatgcgt
    43501 tcgcgaccgg cgatggcaat atgtggcttg ccagcggtgg tgactggttt ttcgatttaa
    43561 atgattcaga gcaacaagag gcaatagatc tgttgctgaa attccatcac cttccacata
    43621 ttattgaaat cactaacgac ataataaaat atgtcatcgc acatgcagat tatccgggga
    43681 gtgaatatct ctttggtaaa gaaatagcgg agagcgaatt actctggcct gttgatcgtg
    43741 tgcagaaatc gcttaatggc gagttacaac aaataaacgg cgctgattat tttatatttg
    43801 gacatatgat gtttgataac attcagacgt tcgctaacca gatttatatt gataccggat
    43861 cgccgaaaag tgggcggctg tcattttata aaataaggta gtctcatgct tcttctgtga
    43921 agcatgagta accagatgtt attgcaggcc attattcatt tttcgctacc agcaaagaga
    43981 gatcctgctt cgccagcgcg cgactggcac tctccggcaa accgtcgtct gtaataatct
    44041 gatcaaactc gcttaatggt aacgccagcc atgtcgccac ctgaccatat ttcgtcgcat
    44101 cacagaccaa aactcgctgg cggctggcac tggcaatcgc ccgtttcacc gtgactttat
    44161 cttccgctgg cgtagaaatc ccccgcacac tccatgacga tgcagaaata aaagcctgat
    44221 caatcatcag gctgcgcagc atggtcgcag cggcttcccc gacacaggaa cggttttccc
    44281 gacacactgc accgccagtg tgaataattg tgcaattact gttgtcgagc aagtagttcg
    44341 caataacgaa atcgtttgtg accacagtca gtgactccat gtgaatcaga tgctgtgcta
    44401 tcgctaacgt ggtcgttccc gcatccagat agatacaact tcccggctga acaagacttg
    44461 ccgccagctt gccaatagcc gctttttgcg tcattgccag cgcagttttt acctgatgag
    44521 aaggttcatg cgccacgcgt cccggagact ggacgcctcc ggacaccagc acaacggctc
    44581 cctgctgctc cagtttttgt aaatcccgac gaatggtcat atgtgacaca ttcattctgt
    44641 ccgttagttc agcaatactg acaatgcctt tttcagctac catctcaagg atgatttggc
    44701 gacgctctac aggtatcaac ttttgctcct tcctttgtcc tgctgacatt ctacgctatt
    44761 tgcctgcgaa acgtgcgcgg cgcaactaac gcttagttca cataaaataa cacacaatgt
    44821 taatttatgt gaatcagctc accatatcgt tatcttccag cgcttatatt cacaatatca
    44881 aacaaaatat cacttaaatt aacaaggaga gcagatgaaa acgggatctg agtttcatgt
    44941 cggtatcgtt ggcttagggt caatgggaat gggagcagca ctgtcatgtg tccgcgcagg
    45001 tctttctacc tggggcgcag acctgaacag caatgcctgc gctacgttga aagaggcagg
    45061 tgcttgcggg gtttctgata acgccgcgac gtttgccgaa aaactggacg ctctgctggt
    45121 gctggtggtc aatgcggccc aggttaaaca ggtgctgttt ggtgaaacag gcgttgcaca
    45181 acatctgaaa cccggtacgg cagtaatggt ttcttccact atcgctagtg ctgatgcgca
    45241 agaaattgct accgctctgg ctggattcga tctggaaatg ctggatgcgc cagtttctgg
    45301 tggtgcagta aaagccgcta acggtgaaat gactgtcatg gcctccggta gcgatattgc
    45361 ctttgaacga ctggcacccg tgctggaagc cgttgccgga aaagtttatc gcataggtgc
    45421 agaaccggga ctaggttcga ccgtaaaaat tattcaccag ttgttagcgg gcgtacatat
    45481 tgctgccgga gccgaagcga tggcacttgc agcccgtgcg gggatcccgc tggatgtgat
    45541 gtatgacgtc gtgaccaatg ccgccggaaa ttcctggatg ttcgaaaacc ggatgcgtca
    45601 tgtggtggat ggcgattaca ccccgcattc agccgtcgat atttttgtta aggatcttgg
    45661 tctggttgcc gatacagcca aagccctgca cttcccgctg ccattggcct caacagcatt
    45721 gaatatgttc accagcgcca gtaacgcagg ttacgggaaa gaagacgata gcgcagttat
    45781 caagattttc tctggcatca ctctaccggg agcgaaatca tgatcaagat tggcgttatc
    45841 gccgatgatt ttaccggcgc gacggatatc gccagttttc tggtggaaaa cggtctacca
    45901 acggtacaaa ttaacggtgt tccaacaggt aaaatgccgg aagcaatcga cgcactggtg
    45961 atcagcctga aaacgcgctc ctgtccggtg gttgaagcca cacagcaatc gctggcggct
    46021 ctgagctggt tgcaacagca aggttgcaaa cagatctatt tcaaatactg ctctactttc
    46081 gacagtacgg cgaaaggtaa tatcggcccg gttaccgatg cattaatgga tgctctcgac
    46141 acgccgttta cggtcttctc tccggccctg ccggtcaacg gacgtacggt ttatcagggg
    46201 tatttgttcg taatgaatca actgctggcc gaatccggga tgcgccatca cccggtaaat
    46261 cccatgaccg acagctatct tccccgtctg gttgaagcgc aatccacagg gcgctgcggc
    46321 gtcgtttcgg cacatgtttt cgaacaaggt gtggatgccg ttcgtcaaga gctggctcgc
    46381 ttacagcaag agggctaccg ctacgcggtg cttgatgcgc tgaccgaaca ccatctggaa
    46441 attcagggag aagccttgcg cgatgcccca ctggtaacgg gcggttctgg tctggcgatt
    46501 ggcctggccc ggcagtgggc gcaagaaaac ggtaaccagg ctcgcgaagc agggcatccg
    46561 ctcgctgggc gcggcgtagt gctctccggt tcatgctctc aaatgaccaa ccgccaggtg
    46621 gcacattacc gtcaaattgc accagcccgt gaagttgatg tggcacgctg cctctcaacc
    46681 gaaactctgg ccgcttatgc acacgaactg gcagagtggg ttctgggcca ggaaagtgta
    46741 cttgctccac tggtttttgc caccgccagc actgacgcat tggcagcaat tcaacagcaa
    46801 tacggtgcac aaaaagccag tcaggcagta gaaactctat tttctcaact agcggcgcgg
    46861 ttagcagcgg aaggcgtgac acgctttatt gtcgcaggcg gtgagacctc cggcgtagtc
    46921 acacagagcc tgggcataaa agggtttcat attggcccaa ccatttcccc cggcgtgccg
    46981 tgggtaaacg cactggataa gcctgtctca ctcgccctta aatctggcaa cttcggtgat
    47041 gaagcctttt tttcacgagc ccaaagagag tttttatcat gagcgatttc gcaaaagtag
    47101 agcagtcttt gcgagaggag atgacgcgga ttgccagttc attctttcag cgcggctatg
    47161 caaccggttc ggctggcaat ctgtcgctgc ttttacctga cgggaattta ctggcgacac
    47221 cgacaggttc atgcctgggc aatctcgatc cgcagcggct ttccaaagtc gccgcggatg
    47281 gcgaatggtt aagtggtgac aaaccctcga aagaggtgct ctttcatctg gcgctgtatc
    47341 gcaacaatcc gcgctgtaaa gcggtggtgc atttgcacag cacatggtcg acggcgcttt
    47401 cctgcctgca agggctggac agcagcaacg ttattcgtcc gttcacacca tacgtggtga
    47461 tgcggatggg aaatgtcccg ctggtgcctt attaccgacc gggcgataaa cgcatcgcac
    47521 aggatctggc ggaactggca gcagacaatc aggctttttt actggcaaat catggcccag
    47581 tggtttgcgg tgaaagcctg caagaagccg ccaacaatat ggaagagctg gaggaaacgg
    47641 caaagctgat ttttattctc ggtgaccgcc cgatccgtta tctgaccgca ggtgaaattg
    47701 cggaattaag gagttaatgc aatgcctcgt tttgcagcta atttatccat gatgttcacc
    47761 gaagtgcctt ttattgaacg cttcgccgca gcgcgaaaag ccgggttcga tgctgtggaa
    47821 tttctgtttc cctatgacta ctccaccctg caaatccaaa agcaactgga gcaaaaccat
    47881 ctgacactgg cgctgttcaa taccgctccc ggagatatta atgcggggga atggggatta
    47941 tccgcccttc ccggacgtga gcacgaagca cacgcagaca tcgacctggc actggaatat
    48001 gcattggcgc tcaattgtga acaagtccat gtgatggcag gcgtcgtgcc cgctggcgaa
    48061 gacgctgaac ggtaccgggc agtatttatc gataatctcc gctacgctgc cgaccgcttt
    48121 gcgctacacg gcaagcgaat attagttgaa gcactcagcc ccgacgttaa gcctcattat
    48181 ctcttctcca gccagtatca ggcactggct attgttgaag aggttgcgcg agataacgtg
    48241 tttattcaac tagatacttt tcatgcgcaa aaagtagatg gcaacctgac gcatttaatc
    48301 cgcgactacg ctgggaaata tgcgcacgta caaattgccg gactacctga tcgacatgaa
    48361 ccggacgatg gagaaatcaa ctatccgtgg ctgttccgcc tgttcgatga ggtgggatat
    48421 cagggctgga tcggttgtga atataaacct cgtggcctca ccgaagaagg gcttggctgg
    48481 tttgacgcct ggcgctaatt cgttaaatcc ctaattacaa cgtacccata catcccccca
    48541 tctacggatg gggtaggtta actataactt tcagacaggg tttcccatgt ccacaattac
    48601 attgttatgc attgcgttag ctggcgtaat catgctgttg ctgctggtca tcaaggcaaa
    48661 ggtacaacca ttcgttgctc tgctcctcgt cagcctgtta gtcgcacttg cggcgggtat
    48721 accggcgggc gaagtgggta aagtgatgat cgccgggatg ggcggtgtgc ttggttccgt
    48781 cactattatt attggtctgg gcgctatgct ggggcgtatg atcgaacact ctggtggtgc
    48841 agagtcactg gctaattatt tcagtcgcaa gttaggtgac aaacgaacta tcgctgcgct
    48901 gactctggca gcgttcttcc tcggtattcc cgtcttcttt gatgtcggct ttattattct
    48961 tgcgccaatc atttacggtt ttgccaaggt tgccaaaata tcgccactca aatttggcct
    49021 gcctgtcgct ggaatcatgc taactgttca tgtggcggta ccgccgcatc caggccctgt
    49081 cgccgcagcg gggttactcc acgcagacat cggctggcta accatcatcg gtattgcgat
    49141 ttctattccc gtagggattg ttggctactt tgcagcgaaa ataatcaata cgcgccaata
    49201 tgcgatgtcg gtggaagtac tggaacagat gcaactggct ccggccagtg aggaaggcgc
    49261 aacaaaatta agcgataaaa taaatccacc gggcgtcgcg ctggtcacct cgctaattgt
    49321 tattcctatc gcgattatca tggcgggtac ggtttccgca acactgatgc cgccttcgca
    49381 tcccctgctt ggtacgctac agctgatcgg ctcaccaatg gtagctctaa tgattgcgct
    49441 ggtgctggca ttctggttat tggctttacg tcgcggctgg agcttacaac acaccagcga
    49501 cattatgggc tcagcccttc ccactgcggc ggtagtgatt ttggttactg gtgctggagg
    49561 ggtatttggc aaagtgctgg tggaatcggg cgtcggcaaa gcccttgcca atatgctaca
    49621 aatgattgac ctgcctctgt taccagccgc atttattatt tcactggctc tgcgtgcatc
    49681 gcaggggtca gcaaccgtag caatcctgac aaccggcggg ttactctcag aagcggtgat
    49741 gggattgaat ccgattcagt gcgtattggt gacgctggca gcctgctttg gtgggcttgg
    49801 cgcgtcacat attaatgact cagggttctg gattgtgacc aaatatctgg ggttgtcggt
    49861 agcagacggt ctgaaaacct ggacagtgtt aacgaccatt ctcggtttta ccggattctt
    49921 aattacctgg tgcgtatggg cggtaatttg accttaataa aaaggtccga tgggcatcgg
    49981 accttttatt taacgcttac cttccaccag cagcggcggg atgctcggca ccattggcgc
    50041 gtcatcaata tctttctgcg tcatgcggaa cgcttcggga taatgttcgc ggctggtacg
    50101 gcgcagcggt tcggtatcgc gccaggtata aaggcaatgc tggcactgat ataccgtcca
    50161 gacatctttc accggcgatt tcgccatcac ttcaatctgt tcatcggcac aacgtggaca
    50221 aatcatcttc ttctccttat ttacgtgcag ccagcatagc ggtcagtttt tcagcccagg
    50281 ctttggtttc cggtaaatcc accaccggtt ggctgtagtg accacggttg tccggggcga
    50341 caggcgtagt ggcgtcgata atcagcttgt cggtgatccc cgcagggctt gagcctggat
    50401 cgagttccag cacggacata ttcggcaact gcaccaaatc ccctgccggg ttcactttcg
    50461 aggagagcgc ccacatcacc tgcggcaggt tgaacgggtc aacgtcttca tcgaccataa
    50521 tcaccatctt cacgtagccc agaccatgcg gcgtggtcat tgcgcgcagg cccaccgcgc
    50581 gggcaaagcc gccgtagcgt tttttggtgg agataatcgc cagcaggcca tgggtgtaca
    50641 tggcgtttac cgcctgcact tccgggaact cggctttcag ctgctgatac agcggcacgc
    50701 aggtggctgg ccccatcagg tagtcgattt cggtccacgg cataccgagg tacagcgatt
    50761 cgaaaatcgg cctggtgcgg taagagactt tatcgatgcg caccacggtc atgttacgcc
    50821 cgccggagta gtgcccggta aactcaccga acggcccttc gatttcgcgt ttacggcttt
    50881 cgatgacccc ttcgaggatc acttctgaac cccacggcac atcaaaaccg gtcaacgggg
    50941 cggtggcgat cgggtacggg ctttcacgca gcgcgcctgc catttcgtac tcggactgat
    51001 catatttcag cggcgtggcc cccatcagcg tgatgatcgg atcgttaccg agcgtgatcg
    51061 caatcggcag atcttcaccg cgctcttctg ctttatgcag atgcagggcg atatcgtgca
    51121 tcggcaccgg ttgcaggccg agcttacgct tgcccttcac ttccatgcgg tagatgccga
    51181 cgttctgctt gccgaagtta tccgggtcga gcggatcgcg ggaaaccacg cacgctttgt
    51241 cgagatagaa accgccatcg ccatcgttta aacgaaacag cggcaggata tcgaacaggt
    51301 tgatctcgtc gccatcaacg gtgttctgcg cccaggctgg attggcgcgg cgctccgggg
    51361 caatcgggaa gttatcccag cggcggataa actcatcaat ctgcttttta accggggcat
    51421 ttggcggcag gccgagggaa atcgcgtggt tctgccagga accgatggtg ttcatcgcca
    51481 cgcgggcatc ggtaaagccg cgaatattat caaaccacag cgcgggcgcg ccgtcgccga
    51541 tacgcccggt ggcgttagct gctgctgcca gatccggctc ggcgttcact tcttcgctga
    51601 ttttcagtaa ctggccgtgg tcatcaagct cctgtaaaaa gctgcgtaaa tcatcaaatg
    51661 ccattattca ttctcctgag aaaaattccg ggcctgcggc aatccttgcc agcgcctggc
    51721 gtggggatgt tcgaggccaa attgatccag cacgcgggct accacatggt ggacaatgtc
    51781 atctaccgtt tcgggatggt tataaaaggc aggcatcggc ggcaccatcg ccacgcccat
    51841 gcgtgaaagt gcgagcatat tttcgagatg gatggtgcta agcggcattt cacgcggcac
    51901 cagcaccagt ttgcggcctt ctttgagcac gacgtccgcc gcgcgcccta ccaggccatc
    51961 ggcgtaacca gcgcggatac cggcgagcgt tttcatactg cacggaataa cgatcatgcc
    52021 gtcggtacga aaagaaccgg atgagatgat cgccgcctga tccgccgggt tatggctgaa
    52081 gtctgcgagg gcagcaacat cgcgagcgct gtaaggcgtt tccagttcaa tggtggtttt
    52141 cgcccacttc gacatcacca gatgagtctc gacattcggc atctcccgca gcgcttgcag
    52201 taatgccaca ccaagaggcg caccggtagc ccctgtcatc ccgacgatca gtttcattgc
    52261 ttattctctt aattgttcgt atacgaacgt tattattaac atactccttc atatccacag
    52321 cggcaaggat tgaaaagtaa caacatcttc ttcgtcacta aaaaaccgct atgatagcga
    52381 cagagaatta gcccggagtt tacatggcgt tacgaaataa agcgttccat cagttacgac
    52441 agctttttca gcagcacacg gctcgctggc agcacgagtt acctgacctg accaaaccac
    52501 agtacgcggt gatgcgcgcc attgctgata aacctggtat cgaacaggtg gcactgatag
    52561 aagcagcagt cagcaccaaa gcaacgctag cagaaatgtt ggcaagaatg gaaaatcgtg
    52621 gcttagtcag acgtgaacat gactccgctg acaagcggcg acgctttgtc tggctgactg
    52681 ccgaaggaga aaaggtactt gctgcggcga tacctattgg tgacagcgtg gatgaggaat
    52741 ttttggggcg tttgagtgga gaagagcagg agctgtttat gcagctggtg cgcaagatga
    52801 tgaacgcata gggggcaaat ttccggatgc gacgctatcg cgtcttatcc agactacaaa
    52861 tacaccgact caccaaccga aagaaaaaag gccagcctcg cttgagactg gcctttctga
    52921 cagatgctta cttactcgcg gaacagcgct tcgatattca gcccctgcgt ttgtaggatt
    52981 tcgcgcaaac ggcgcaggcc ttcaacctga atctggcgaa cacgttcacg ggtgaggcca
    53041 atttcacgac ctacatcttc cagtgttgcc gcttcgtacc ccagcaaacc gaatcgacgt
    53101 gccagcactt cacgctgttt ggcgttcagc tcgaacagcc atttgacgat gctctgcttc
    53161 atatcatcat cttgcgtggt atcttccgga ccgttctctt tttcatcggc caggatgtcc
    53221 agcaacgctt tttcggaatc accacccagc ggggtgtcta ccgaggtaat gcgctcgtta
    53281 agacgaagca tacggctgac gtcatcaact ggcttatcca gttgctctgc gatctcttcc
    53341 gcacttggtt catggtccag cttatgggac aactcacgtg cggttcgcag gtaaacgttc
    53401 agctccttta cgatgtgaat cggcaaacga atagtacggg tttggttcat aatcgcccgt
    53461 tcaatcgtct ggcgaatcca ccaggttgcg tatgtcgaga agcggaaacc acgttccggg
    53521 tcaaacttct ctaccgcgcg gatcagcccc aggttgccct cttcgataag gtccagcaac
    53581 gccagaccac gattgccata acggcgggca atttttacca ccagacgcaa gttactctcg
    53641 atcatccggc ggcgagaggc gacatctcca cgcagtgcgc gacgcgcaaa ataaacttct
    53701 tcttcggccg ttaacagtgg tgaataacca atctcaccaa ggtaaagctg agtcgcgtcc
    53761 aacacacgct gtgtggctcc ctgcgataac agttcctctt cggccaaatc gttatcactg
    53821 ggttcctctt ctactaaggc cttttcgtca aaaacctcaa ctccgttctc atcaaattcc
    53881 gcatcttcat ttaaatcatg aactttcagc gtattctgac tcataaggtg gctcctaccc
    53941 gtgatccctt gacggaacat tcaagcaaaa gcctggttcc gccgatttat cgctgcggca
    54001 aataacgcag cgggtttacg gatttcccct tgtaacgaat ttcaaaatgc aagcgtgttg
    54061 aactggttcc ggtgctaccc atggttgcta ttttttgccc cgccttcact tcttgttgtt
    54121 cccggaccag cattgtgtcg ttatgggcgt aggcactcag gtaatcatca ttatgtttga
    54181 tgataatcag attaccgtag ccgcgcagcg cgttaccggc ataaacaacg cggccatctg
    54241 cggtcgcgat aattgcctgt cctttgctgc ctgcgatatc aatccccttg ttgcccccct
    54301 cagaagcgcc aaaggtttcg atcactttgc cctcagtcgg ccagcgccag gtggagatag
    54361 gcgtactggt tgatgtactg ctgacagtcg gctcggttgt gcttgctgtt ggtaccgtta
    54421 caggcgctgt gaccgtggtc gcagttggct tgttgttcgg caacattttg ttagcactct
    54481 gttcacccga agactcagaa tacgtaattg tcggttgcga cgcaacagca acggtggaat
    54541 tttgtgcagg cttgatcaca actccttgct ctgctgcatc ggcctgggta atggcatttc
    54601 cgccagtgat tggcgtaccg gaagcattac ccacctgtaa ggtctgaccg acgttcagcg
    54661 cgtatggtgc ctgaatattg ttgcgctgag caaggtcacg gaaatcgttg ccagtaatcc
    54721 aggcgatata gaaaagtgtg tcgccttttt tcacggtata ggtactgccg ctataactgc
    54781 ctttcggaat gttcccatac tgacggttat agacgatgcg tccgttttcc atctgtaccg
    54841 gctgctgagc tactggctgt actggctgga tttgcggttg ttgagtagcc tgaatttgtg
    54901 gctgctgtac cggctgaatt tgcggttgct gcgctgtaga cgtcgttccc attttcggcg
    54961 gcggcgtaat caacatacca gaattggtat ttgcaggcgc attgccatta acggagctga
    55021 ccggtgccgg tggatttgaa gtgtcagaac agcctgccag ccatagcgaa accagtgaca
    55081 aagccgcaat gcggcgaacg gtgaattttg ggcttcccgc gctcatttat cccccaggaa
    55141 aaattggtta ataaccagtg acataattac cgtgcaaggc accatactga acactggaaa
    55201 agatgttcac gatacgctga cctgcggcaa aataaccagg aaaaatccag gtatttcctc
    55261 acgttttaag ccagctcacc cttcactaaa gggacaaagc gcacggcctc cacggtatcg
    55321 ataataaatt cgcctccccg acgacgcacc cgtttcaaat actggtgctc ctcccctacg
    55381 ggtaagacga gaatcccgcc ttcgtccagc tgcgtcatta gcgcagttgg aatttccggc
    55441 ggtgccgccg taacaatgat agcgtcaaac ggcgcacgtg cctgccaacc ttgccatcca
    55501 tcgccatgac gggttgaaac attatgtaaa tcaagatttt tcaggcggcg acgcgcctgc
    55561 cactgcaagc ctttaatccg ttcaaccgag caaacatgct ggacaagatg cgccaggatt
    55621 gccgtttgat atcccgaacc agtgccaatt tccagcaccc gcgactgcgg cgtcagctcg
    55681 agtaattcgg tcattcgcgc caccatatac ggctgcgaaa ttgtctgccc ctgacctatc
    55741 ggcaaggcga tattgtccca ggctttttgt tcaaacgctt catcaacgaa tttttcacgc
    55801 ggcacggcgg caagtgcatt cagcacctgc tcatcctgaa taccttgcgc acgtaattga
    55861 tccagaagtg cttgtacgcg tctgcttacc attgcgtgcc aactcccacg ctgtttaacc
    55921 agtctgaaac cacatcttgc gcgctatgcg cagttaaatc cacatgcagc ggcgtgatgg
    55981 agacatagcc ttcatctacc gctgcgaagt cggtatccgg cccggcgtca catttccccc
    56041 ccggaggacc aatccagtac agtgtattac cacgaggatc ttgctgcggg atcacctgat
    56101 ctgccggatg acggctccca cagcgagtca cgcggattcc tttgatttgg tccagcggca
    56161 aatccggtac atttatatta agaatacgcc ctgttcgcag cggttctttg cacagtgcac
    56221 gcagaataga acaggtaact gccgcagcgg tgtcgtaatg tttatgcccg tctagcgaga
    56281 cggcaagcgc cggaaaacct aaatggcgac cttccatcgc ggcggctacc gtaccggaat
    56341 aaataacatc atcccccaga ttcggcccgg cgttaatccc ggacacaaca atgtccgggc
    56401 gcggacgcat cagagcattc acgccaagat agacgcaatc ggtcggggtt cccatttgca
    56461 cagcaatatc accattttca aaggtaaacg tgcgcaggga ggattccagt gtcagagaat
    56521 ttgaagcgcc gctgcggtta cgatcggggg cgaccacctg aacgtcagca aactcacgca
    56581 aggttttcgc cagcgtttgt ataccgggtg catgtacccc gtcatcatta ctcagcaata
    56641 tgcgcataat cacctgttgt gttgataagt tccctgacaa cgctggttgc aaaactaccc
    56701 gccggaagcc agaaacggat ctctacggtg acgtcatccc accaattcca gcttaattgt
    56761 tgcggataca gcagcatcgc tctgcgcgcg gcttcaactt tttcgcgcac cagtaaagct
    56821 tgtaattcag tttctgcggc gacagctgct tgttcgaatg ccagcgcttc acgctgagtt
    56881 ccccattcgc cactgcccgg caatgcggcg gttatcatca actctttatc gttgacgcga
    56941 cgctgtaatt ccgccagttc ttcggtggtt gctacaaacc agctaccacg tccggctaat
    57001 tgtagcgcat cgccgtcaac aacttgatta acgtctgctt ttttgaggcg ctcagcaaca
    57061 atctgattaa acaacgcact gcgggctgcc gacaaccaaa aactccgttt attacgatcg
    57121 cgcaccggag tattggtttg cgcccagcgc agcgcgccct gcaagttgct accgccaatc
    57181 ccaaaacgtt gggcaccgaa gtagttcggt acacctttta cgcaaatatc gatcagacgt
    57241 tgttcaacgt catcgcgatt gctcacttcg cgcagaacca gggtaaaggc gttacctttc
    57301 agcgcgccta aacgcagctt acgcttgtgc cgcgcatact ccagcacctg gcagccttcc
    57361 agttgaaagg cgctcagatc gggcatttcc ttgcctggca cgcgagcgca taaccactgt
    57421 tccgtaacag catgtttgtc tttttgccca gcgaagctga cttcacgggc atgaattttc
    57481 aggaatttcg ccagtgcatc cgccacaaaa cgggtattgc agccgttttt gaggattcta
    57541 accagaatat gctcaccttc accatcaggc tcaaagccca aatcttccac caccacaaag
    57601 tcttccggat tggctttcag cagcccggtg ccttgcggtt taccgtggag gtaagtgaga
    57661 ttatcaaact caatcatttt gttgccttaa tgagtagcgc caccgcttca caggcaatcc
    57721 cttccccacg tccggtaaat ccaagttttt ccgtagtagt ggctttcacg ttaacatcat
    57781 ccatatggca gccgagatct tcggcaataa acacgcgcat ttgtggaatg tgcggcaaca
    57841 tcttcggtgc ctgagcgatg atagtgacat cgacgttgcc cagggtatac cccttcgcct
    57901 gaatacgacg ccaggcttcg cgtagcagct cgcggctgtc ggcaccttta aatgccggat
    57961 cggtatccgg gaacagcttg ccgatatccc ccagcgccgc cgcgccaagc aatgcatcgg
    58021 tcaacgcatg gagcgccacg tcgccatcag aatgcgccag caatcctttt tcgtaaggaa
    58081 tgcgtacgcc accaatgata attgggcctt caccgccaaa ggcatgtacg tcaaaaccgt
    58141 gtccaattcg cattatgtat tctcctgatg gatggttcgg gtgaggtaaa actcggccag
    58201 tgccaaatct tccgggcgcg tgactttaat gttatccgca cggccttcga ccaactgagg
    58261 atggaatccg caatattcca gcgccgaggc ttcgtcggta atagtcgcgc cttcatttag
    58321 agcgcgcgtc agacagtcat gtaacagctc acgagggaaa aattgcggcg tcagcgcgtg
    58381 ccataagccg ttgcgatcaa cggtatgagc aatggcattt ttgcccggtt cggcacgttt
    58441 catcgtatcg cgcactggtg cggctaggat ccctcccgtg cggctggttt cgctcaacgc
    58501 caacaatcgc gcgaggtcat cctgatgcag acaaggacga gcggcgtcat gcaccaatac
    58561 ccactgcgcg tcgccagcgg ctttcaaacc tgccagcacg gaatcggcac gctcatcacc
    58621 gccatctaca acggtgattt gcggatgatt cgccagagga agttgtgcaa aacggctatc
    58681 gccaggactt atggcaatga cgacacgttt cacccgggga tgcgccagca gcgcatgcac
    58741 cgagtgttca agaatggttt gattaccgat tgagagatat tgcttaggac attccgtttg
    58801 cattcgacgg ccaaatccgg ccgccggaac cacggcgcaa acatccaaat gagtggttgc
    58861 catgttaatt cccgggctga tttatcgatt gttttgcccc gcagactgtg cgcgcttcga
    58921 cgcgtcaggc accagacgat aaaaagtttc gcccggcctg gtcatgctga gttcattacg
    58981 cgcacgctct tcgagcgcct cctggccgcc attgagatcg tcaatttcgg caaaaagttg
    59041 atcgtttcgc gctttaagtt tcgcgtttgt agcttgctgt gccgccacat catcattgac
    59101 gcgggtatag tcatgtatac cgttcttacc gaaccacagc gaatactgta gccagaccag
    59161 aatagccagc aacagcagcg ttagtttacc catcctgccc cctgaaaaac ggcatcatca
    59221 tcccatgcat ccgaagacga ctctacatcc tctgttgggg ataccgcgac aacgcgggca
    59281 aatgtaccac atttgtccat tgttacgtat acccagggcg tgcagaacat aatctcatta
    59341 ttagttacgg tttgaattat gaacagagga gacaagaaag tacaaattag cccagtagcc
    59401 acataaacag tgcgccaaac ataatgccta ctgtcaccag ggtgaaaaca atactgtagc
    59461 gtagctttcc gtccatcaat gaatgcagcg caatccccac cactaccgcg acgggcatca
    59521 gcgccagaaa gaaaggccag gtgtagataa agaagaacag cgtgttagag ccataaatca
    59581 acatcggcat cgccagcgca aataaccagg agataaaacc gaccacggca ccaggcagtg
    59641 accatgtggt ttcttcatcc tcagtaaggc tgtcgttatt tgttagtgta atgttatggc
    59701 tattacgcat atttgatcct gttactttga cgaaccgggc atggaaaccc ggtggtgtct
    59761 caggatctga taatatcgtt ctgtctcaac agatctaata attgctgtac caaatttgtt
    59821 actaattgtt caccattgag atgaatttct gccgattcag gcgcttcgta aacggaatct
    59881 attcccgtaa agttgcgcag ttcaccggca cgcgctttct tatataagcc tttgggatcg
    59941 cgggcttcgc aaatcgccag cggcgtatcg acaaacactt cgataaagcg cccttctcct
    60001 acgcgttcgc gaaccatctg gcgttcggcg cggtgtggcg agataaatgc ggtcagcact
    60061 accagtccgg cttcaaccat caaattcgcc acttcaccga cgcgacggat attctcttta
    60121 cgatcggcat cgctaaaacc gagatcgctg cataatccgt ggcgaacatt atcgccatcc
    60181 agcagatacg tactgacgcc gagtttatgt aacgcctcct ccagcgcccc ggcgaccgtt
    60241 gatttaccgg acccggagag gccggtaaac cacagcacta caccacgatg accgtggtgt
    60301 agctcgcgtt gttgcacagt gaccggatgg ctatgccaga cgacgttttc gtcatgcagc
    60361 gccattattt atcccccagc aaatcgcgcg cgccccagtg cggaaagtgg cgacgaacca
    60421 gagcattcaa ttccagttcg aatgcactga attcagatgg cgcagcagtt gcctggctaa
    60481 ctggctcgtg caccataccg gcacccacgg tcacattgct caggcgatcg ataaaaatca
    60541 gcccacccgt caccggattt tgttgataac gatctaacac cagcggctcg tcaaaagtga
    60601 gatccacgag gccgatccca ttcagtggca ggttttcaac ttcacgctgg gtaaggttat
    60661 taatatcaac ctgatagcga atgccatcaa cacgcgcgcg cgtcttctta ccggcaattt
    60721 tgatgtcgta actctgccct ggagaaagcg gctgttccgc catccatacc acatccaccg
    60781 acgcgctctg caccgccggt aacgcttcgt ctgccgccag cagcagatcg ccacggctga
    60841 tgtcgatctc atccgtcagc accagggtga tcgcttctcc ggcaaaggct tcttcgcgat
    60901 caccatcaaa agtcacgatc cgcgcgacgt ttgattccac accagagggc agcactttga
    60961 cacgttgccc gacttccacg cgaccggatg ccagcgttcc ggcgtagcca cgaaaatcga
    61021 gattcgggcg attaacgtac tgcaccggga agcgcattgg ctgagcatcc accactcgct
    61081 ggatctccac ggtttccagc acttcgagca gtgtcggacc gctgtaccac ggcatacttt
    61141 cactttgcga agccacgttg tcgccttcca gtgcagagag cggcacaaag cggatatcca
    61201 gattaccagg taactgttcg gcgaaagtca ggtagtcttc acgaatgcgg gtgaatgtct
    61261 cttcactgta atccaccaga tccattttgt tgatcgctac gaccagatgt ttgatcccca
    61321 gcagcgtgga gataaaactg tgacgacggg tttgatcgag cacgccttta cgggcatcga
    61381 tcagtaagat cgccagctca cacgttgagg cgccggtcgc catattgcgg gtatactgct
    61441 cgtgcccggg ggtgtcggcg ataataaatt tacgcttctc ggtagagaaa tagcggtagg
    61501 ccacatcaat agtgatgccc tgttcgcgct cagcttgcag gccgtccacc agcagagcca
    61561 gatccagttt ttcgccctgg gtgccgtgac gcttactgtc gttatgcagc gatgagagct
    61621 gatcttcgta gatttggcgg gtatcgtgca gcaggcgacc aatcagggta cttttgccgt
    61681 catcgacgct accacaggtc agaaaacgca gcaggctttt atgttgttgc gcaatcatcc
    61741 aggcttcgac gccgccttca ttggcgattt gttgtgcaag tgcggtgttc atcttaaaaa
    61801 tacccctgac gttttttcag ctccatagac cccgcctggt cgcggtcaat cacgcggccc
    61861 tgacgttcac tggtggtgga aaccagcatc tcttcgatga tttccggcag tgtttgtgca
    61921 tttgactcca ccgcaccggt cagcggccag cagcccagcg tacggaaacg caccatccgt
    61981 tttttaatca cttcgcccgg ttgcaggtcg atacggttgt catcaatcat catcaacata
    62041 ccgtcgcgtt ccagaaccgg acgttccgca gcgagatata gcggaacaat gtcgatattt
    62101 tccagccaga tgtattgcca gatatcctgc tcggtccagt tagagagcgg gaagacgcgg
    62161 atgctttcgc ctttgttaat ttgcccgttg tagttgtgcc acagctccgg gcgctgattt
    62221 ttcggatccc agcgatggaa gcggtcacgg aaagagtaaa ttcgctcttt agcgcgggat
    62281 ttctcttcgt cacggcgcgc accaccgaag gcggcatcaa aaccgtattt gttcagcgcc
    62341 tgtttcaggc cttcagtttt cataatatcg gtatgtttcg cgctgccgtg cacgaatgga
    62401 ttaatcccca tcgccacgcc ttccgggttt ttatgcacca gcagttcgca gccgtaggct
    62461 ttcgccgtac gatcgcggaa ctcatacatc tcgcggaatt tccagccggt atcgacatgc
    62521 agcaacggga aaggcagcgt acctggataa aacgccttgc gcgccagatg cagcatgacg
    62581 ctggaatctt taccgataga gtagagcatc accggatttg agaattctgc cgccacctcg
    62641 cgaataatgt ggatgctttc cgcctccagt tgccgcaggt gagtaagtcg tatttgatcc
    62701 ataaccgttc ctttgcaata ccgctatttt cttgccatca gatgtttcga ctatagggag
    62761 cgtaagagaa cgaatgaaat taccaattag aatgagtagt tccttaacgg aataacgatt
    62821 tggcaaagct aatatcaaaa agtgcttaag gcaccggatt tcgggcgttt aggaagattt
    62881 gaaattgttt tagcgcagcg gcagtttcat actatggcgg taaaaaaatt tgcatggtat
    62941 ttaaggactc actatgtttt ccgcattgcg ccaccgtacc gctgccctgg cgctcggcgt
    63001 atgctttatt ctccccgtac acgcctcgtc acctaaacct ggcgattttg ctaatactca
    63061 ggcacgacat attgctactt tctttccggg acgcatgacc ggaactcctg cagaaatgtt
    63121 atctgccgat tatattcgcc aacagtttca gcaaatgggt tatcgcagtg atattcggac
    63181 atttaatagt cggtatattt ataccgcccg cgataatcgc aagagctggc ataacgtgac
    63241 gggaagtacg gtgattgccg ctcatgaagg caaagcgccg cagcagatca tcattatggc
    63301 gcatctggat acttacgccc cgctgagcga tgctgacgcc gatgccaatc tcggcgggct
    63361 tacgttacaa ggaatggatg ataacgccgc aggtttaggt gtcatgctgg aattggcaga
    63421 acgcctgaaa aatacgccta ccgagtatgg tattcgattt gtggcgacca gcggcgaaga
    63481 ggaagggaaa ttaggcgcag agaatttact caagcggatg agtgacaccg aaaagaaaaa
    63541 tacgctgctg gtgattaatc tcgataactt aattgttggc gataaattgt atttcaacag
    63601 cggtgtaaaa acccctgaag cagtaaggaa attaacgcgc gacagggcgc tggcaattgc
    63661 gcgcagtcac ggaatagccg caacgaccaa tccgggtttg aataaaaatt atccgaaagg
    63721 cactgggtgt tgtaatgacg cagaaatatt cgacaaagcg ggcattgctg tactttcggt
    63781 ggaagcgact aactggaatc ttgggaataa ggatggttat cagcaacgcg caaaaacagc
    63841 cgcattccct gcgggaaata gctggcatga cgtaagactg gataatcaac agcatattga
    63901 taaggcactt cctggaagaa tagaacgtcg ctgccgtgac gttatgcgga taatgctacc
    63961 gttggtgaag gagctggcga aggcgtcttg atgggtttga aaatgggagc tgggagttct
    64021 accgcagggg cggggaattc taagtgatat ccatcatcgc atccagtgcg cccggtttat
    64081 ccccgctgat gcggggaaca cacatgaatg tcggttcaga ccgtgttttt acccggttta
    64141 tccccgctgg cgcggggaac acagtgctgg accatttcaa attcacaata gattcggttt
    64201 atccccgctg gcgcggggaa cacggaatga tatttcaata aataattata acaatcggtt
    64261 tatccccgct ggcgcgggga acactttttg ttaattgcgt ttgccacggt ttgcaacggt
    64321 ttatccccgc tggcgcgggg aacactgagc gtcggcggct cgctggattt gcgcggcggt
    64381 ttatccccgc tggcgcgggg aacacaatgc atcagttgaa cacaaaagta gcttttccgg
    64441 tttatccccg ctggcgcggg gaacactttt gctgacaccg gcaatactga acggctggcg
    64501 gtttatcccc gctggcgcgg ggaacacacg gattgcggta tatgcagtgt ccagattctc
    64561 ggtttatccc cgctggcgcg gggaacacgc gatggatcag ggtattacac tcgacggcgg
    64621 cggtttatcc ccgctggcgc ggggaacacg ctgcgggtca atcaactgga gtgcaaatcc
    64681 ccggtttatc cccgctggcg cggggaacac gtcgcgcgcc gacggaataa accgaataaa
    64741 ttcggtttat ccccgctggc gcggggaaca cactaagcat acataactgt ttttaaacaa
    64801 atttattccg catcaacaat ctaccaacta aattaaaaca tttccttatt tttaaagaac
    64861 ggataactta ttgattatca acaggaagaa aagaaaccaa acgcaaccca tccaaatcca
    64921 ccggaatacg tctattttca ccccaggtct gaaattcaaa acctgactcg gtattggtcg
    64981 cccaagccat cactacattt ccgcaacctg ccagttgaga gatttgctgc cagatcatct
    65041 cccgaatacg tttggatgta tctccgacat acacaccggc acgcacttcc agtagccaga
    65101 tagcgagccg tccacgtaaa cgtggaggaa cattttccgt tacaactacg atcatactca
    65161 tccgccgcgt cctcgatgac cgctatcgcc taacgtttca ggttcaggga tggcaggcgg
    65221 taacatatcc ggcgcgggtt gtggtggttc aatttcacca gcggcaagca cttcctcaat
    65281 taacggaatt aacttgcccg ttaatttact actacggaaa atatcgcgac aggccaacct
    65341 gacttcttta tctggttctg cgggttgcct cgctgctatt tcaaatgcct ttggcacaac
    65401 caaatcaaat ttaatgatat cggctatgtc ataaacaaat gaaagcggtt tgccgctatg
    65461 gataaaacca atagcgggcg catatcccgc agctaatact gcagcttcag aaataccgta
    65521 caggcatgat gtggcagcac tgatgcaacg attgacaaca tcgccttttt cccagtcttt
    65581 aggatcgtat ttgcgaccat tccatttcac accatattgt ttcgccagta atgcatacgt
    65641 ctggcgaacg cgggatccct caattccccg taactgctcc actgaacggc gagctggcgg
    65701 tggctcacga aaacgtaatt catacatttt gcgcaccacc ttcaggcgta gatcttccgt
    65761 taaagccagc tttgcctggt agagtaactt atcagcacgc gccccaccgg gttgtccgga
    65821 agagtagacg cgaacacccg cttcaccgac ccagaccagt agcgtcccca ccgtggcggc
    65881 cagatgcacc gccgcgtggg aaactctcgt tcccggttcg agcataatgc aggcgaccga
    65941 tcccaccgga atgtgcgtgc ggatcccggt tttgtcgatc agcacgaaag cgccgtccag
    66001 tacgtcgatt tgaccgtact ggaggaagat catggaggtg cgatctttta acgggatcgg
    66061 gctcagcggt acaaacgtca cgcctctgct ccaggtttga tcagcatcag accacaaccg
    66121 aacgcccggc ttttgccata cccctgactg agacgttgca gaaataaccc aggatcggtg
    66181 accgtaagca tccccgtata atccacacta ctgaactgga tcagttgccg ggagttttcc
    66241 cgccgcagtt gctgttgtcg gtaggcatca accgaggtat ccagcagtgt aaaaccgctt
    66301 ctctccccct gcgctgccag ccagcccagc gccgcctgtt gttgatgcaa ccagacatca
    66361 cttccttccg cctgccccct cacctgccgt ttcgcctcca tcagcagatc gtggcgcttg
    66421 cccgctttac agattgttgg attcgcccgc aggttgaaac aaagttgttg tccggtacac
    66481 agctcgggcg caaatgaccg gcattctatg gtgaacgtat cactttccgc cgggcgttcc
    66541 tgcgacagta caaaaaagcg aaacgcgccc tggagttctt cccgacgata aagaaattgc
    66601 ctttctttgc cgccagggaa gagatcccac agccactgat gcatcacata ttcaccgcga
    66661 tccaccagat gcagcaactg cgcaggcgaa agctggccgg tatgtaaggt tattcttgag
    66721 aggtacatgg ttcctccttg ctgagccacg gcccctgatt gacggtgcgt tccccaaaca
    66781 gccactgctg acgatttaaa ggaacatccc ggcggcgtaa tattttgctc gcgaccaggc
    66841 cgtcgtgttt cccttcccac cagcattcat cctgaagttt cgggagtgag actttcagtt
    66901 tatggaaatg atcctgatac tgttggtatg cattacataa ggcatcacac gcgttgcctt
    66961 cgagcagtaa cggcgcaaga ggtaatgcca gcggatgact ttttcgcccc agataaagcg
    67021 gaaaaactgg atggcgtaaa ccgtcctgca actgttcgag gctgtaaggc gcatcagttg
    67081 ttgttgccac cgccaccatc caccaggcat cggtgtagta gtcgcgccgg gagataatcg
    67141 cgctcaaaag ctcagggtcg ctcaactctt cgcgacggct gaaataacgt gctttacgca
    67201 cctcttttgg catctggacc gtgtgataat cccgtgccca gcgcgggtta cggctggcgc
    67261 aaaccaccag tgaatagtgg cgattaaacg cgtttaagcg ttcggtatca tcacgccgaa
    67321 tccctacccc ggcagccagt agccccagca atgctgagcg cgaaggaagt tcatgggtat
    67381 gacgaacttc acctggagca tcgacccccc aggacgccat cggcccatga agctgaaaaa
    67441 tcagatattg gctcataagc cgccccttac gcgcagataa agtccagcac gtccttcatg
    67501 cttccctgtt tgttcatcac gtcaaaactt gcgtaatcgg tcttctgttc gtagaccgta
    67561 ttcatatttt cgcgaagagt tgtaatacgc tgcaccgcca cctctaactg acgggtgcca
    67621 ttaatgggtt catagaaagc tgccgccaga gaacgcggtt gatcggtgcc tttttctgcc
    67681 agcgcccagg aggcgtaggc acggctggca aagctgttct gtttgccggt tggggagact
    67741 ttaagtgcgg cttccgtaaa ggcacgtatg gtctgattag ctaacgcttc gtcaccgcca
    67801 aggttttcga ccagcagatc tttatcaatg cagatatagg tgtagaacag tgcagaaccg
    67861 aatccggttt caccaagatg cccggcaccg gcatcttcag aagcctggcg caaatcatca
    67921 acggcggtga aaaaatcatc ttcgacaatc gtttcactga caccaaatgc gtgcgctacc
    67981 tggcaggcgg cttcaacatt aaactcgggt ttattcgcca gcatacgacc aaacatggca
    68041 atatctaccg ccatacggtc tttgcgtaac aacgcgagat cttcctcttt tggcgcgcgc
    68101 ttttcttctg caagctgatg ggccagcgct tttacggcgt caaattctgc cgggctgata
    68161 tggactaact gttcagtttc ggcgttagtg agcggatctt ttggtttttt gtcgttttta
    68221 gctttcccaa gataatctgc aatttttgcc gcccattcga tggctttttt ctcttcgatt
    68281 cctttctcaa tcaggatagt tgccgcctca cgcgcaatac gcccactgcg aataccaata
    68341 tggcccgcca gtgcctgttc aaaaagtgca gaagtgcgcc acgcacgttt cagactttgc
    68401 gaggaaacgc gcagacgcgt tgctccaccc agcaccacag tttttggcgc accggtatca
    68461 tcacggttaa ggttggcagc agggtaagcg gttaacaaat gaagctgaat aaatgttgtc
    68521 atgagatagt cctttattga ttttgttcgt tatcggcgtc gccagcctgg taatattcca
    68581 gcgcccagcg gatacggata aattcggttg gccgctgctg gcggcggtga tgattgagca
    68641 ggtcgtcgct ctcctggcac caacggaaga ccccctctgc cagagagtca agattgacgg
    68701 aaccgtttaa taatctgact gcgcggcgta actggcgcag taattcatcc ggtgttttta
    68761 ctgccgacag acgagtaaaa cgcccctttg acattaccgc cgccagctgc gcggcaaaag
    68821 gctgccgttc atcaatagct ttaacattgg cgctaactgc ggctatcagc gccagtgcgg
    68881 tgatacgcca ctcaggttca tcctgccact ttatttgtct gttcttcaga aacaggcgaa
    68941 atccatccgt cagacaaaca tcattaaccg tcgtactacg ccgcagactg gcacgttcgc
    69001 cacgtttctc ctgcaattcc tcgtgccatt tgcgcagcgt ggctttgtgc tcctctttta
    69061 caatactcat tcagcagcct cctgcttttt ctccctggcg gctttagcac tttgcttctc
    69121 cgccgatgtt gtgaaatatt tcttgcgcgc ggtcataacg cgtttcaaat caacaggctc
    69181 atatggattg gtgaatacac gctcgtcaaa atcctgacgc gcgaataacc aaatttcctt
    69241 ttgccatttg ccgagtaatt cgtccgcatc ctgaccttct tcaatttggc gcactaacct
    69301 caggaagcga tgctgagttt tgttccagaa gtcgatatcc acaaaactga aatcaccccg
    69361 tgcacctttt ggatcggaga accacgcttc tttcaatgca cttcgtaaca gacttagaat
    69421 ccgtgaagcc gtttgcgcag ccagacgcag tttcggtatc tggccttctt ttttcttgag
    69481 cagcagcggg aaatggtgtt cgtaccaaca gcgcgctttc atgttgtcga aatcatagcc
    69541 aaatccccac aggcctactt ttgcctgttt cagactgctg gcattaaaga gtttcaccac
    69601 cagcgcggga agttccgtat tgttttctga tttacccgtt tcgataaggc ctaaccagtc
    69661 gcgccagatt aaaccgcccg gttgtggttt gaccgagtaa aactcgccac cctctttaag
    69721 tggtatacgg taaggcgtta agggatgctg ccacatggca taattcgcac cgtaattttt
    69781 ggtcgtcatc aggctcagga gcgcgtcgct ctgttcaccg caaatatcgc agttgccgac
    69841 tgtcgtggta ttaaaatcaa tacgaatacg gcgcggcatt ccccagtaag cctggagttt
    69901 attgacctga tcatgggtta ccaccgcacc ggccagttcg ctggttcgcg tcgggccaag
    69961 ccaggggaaa accagatcgt caaatttttt gggtagcggt aagtcggctt catcctgcgg
    70021 catcacattg ggccacagtt tgcgccacaa gggcgtttgt tgattgcctt gatattcctg
    70081 taattcaatc agagtggtca tcggcccacc gccgcgcaaa ccggtgcgat agcctttgcc
    70141 gcctgatggc gcatttaact gtagggagaa cagagctaac gcggaacaat gagggcatac
    70201 gtgttcagtc acgccacgct taataaagtg gtctttatta aacttcgttg tttgagcgcc
    70261 gggaatctca ggcagtagcg aagcgacctg aactttatct cccttgagcg cctcgaaatc
    70321 ctgcataaat gaaggggaat ctgccccaaa ctggaaagcg tgttctaagg acagcaatgc
    70381 ttcccgtagc ttttcagcct ccagtccgtc ttgccagata tcatcccaac gaccgtgatt
    70441 tttgggcgcg aagctggttt gtagtagccc cagcaaaaac tgccaggccg caccctggag
    70501 atctgcccgc ggcgcagcga tatcgacaac attttcatca gccagatcga ctggtgccag
    70561 cttgcctgtc gttccgtctt taaaacgaac aggcaaccac ggggttgtca gaagtgaaaa
    70621 cgagttcata cgcatcctct cgtaaaaaag accatcccag gtcggttgtc catctttcca
    70681 tccttttcgg tgtatcaact attcagagag tcctgtcgca gacatctcaa ccaaccttgc
    70741 caatcaatcc ttccgtagcc gaatacccgc aactttcgtc atcgttgact aaaatcacgt
    70801 ttgccatctc cggatcttgt cgctgttcaa tgcaccacag cctgaacgcc tctccctcca
    70861 gtaaagaaaa ctcatcccga tgttttttcc accagcttcg gcgcactctg acaacgctca
    70921 tttcccatgc gtgagcaccg gtggcataag gcttcaccac accgtcaata caggtagcca
    70981 gccacaggga aacagactcc tcagccagac gtgtcgacag tttttccggg aggtaatcgt
    71041 tgatattggc ggcatagccg ggcctgaagt tcagcacaaa ctttttagcc attgcgcgat
    71101 cgcagtaata tttgcccact tgctcctgct cgctgcgggc aaatccttcc ggcattacca
    71161 cgtcctcacc gtagacggat tcaataagaa gccgggctgc gtgtggcatc tgaatagcac
    71221 cttgctcacg cagcacacgc tgcgtcagcc agattcgccc atgatcggga tagacaaatg
    71281 cactgttacg catggcactg ccaaaccatt cgtcgccagg agagtcgtcc cagacgggag
    71341 ccagaatcag caattcaggg ggggaacgct cgtcctttcc gtcacgcttt aactgaccat
    71401 taatatcgcg gatatgccgc tgtaatcgtc ctgctcgctg aatcagcaaa tcaacagggg
    71461 ccaggtcgga gatcatttcg tccaggtcaa tatccacgct ttgctcaatt acttgtttac
    71521 aaacaatgac ttgcgacgct ctctgtaaac tacaatattt accaaagcgt gccagtgtct
    71581 ccgtttcaat tcgctggcga tcgctaaaag caaagcggct atgaaaaagt gaaaggctgg
    71641 aagcaggaat gacgccgcgg gcaagcagct gacgatgaac cttaatagcg tcatcgacag
    71701 aattccggat ccaggcgatg catttcccct gacttaccgc cgattcgata cgcgcaatac
    71761 actcttgttc actatgaagc caacccacgc tgacgctacg ctcaacgtct ttgcgcgtcg
    71821 ctacccggtg tgagttcaca tcggatttcg tgacatgcgt cagccagggg taatcatcct
    71881 tttccaggaa cggagcttct tgcaggccct ctgtaccccg cgcaaaggca gcgacgagtt
    71941 tgtcgcgctg ctgttgagat aacgtggcag aaagcaaaat aacgctgttt ccgccacgcg
    72001 cctgccgctc gatcaaccct tcaagaatgc acgacatgta agcgtcacag gcgtggatct
    72061 catcagccag caggattttg ttactcagcc ccagaagccg cagattatta tgtttgaacg
    72121 gcatcaccgc catcatcgcc tgatccagcg tgccgacgcc aatttcagcc agcaacgcct
    72181 tcttgttact gtcggcaaac caggccgcac atccctgact gaacgtttgt tcatccggtt
    72241 cttctgaccc gactaaatca ccagaccaga gtgattcatt aaagcggtcc attaatgtgc
    72301 gggcactatg tgccagcacc aggctggggc gggattctgg cgaatagaaa gcaagccagg
    72361 ttttgaccag ccgatcgtac atggcattgg ccgttgccat tgttggcaga ccaaaaaaca
    72421 gcccctgagc tttccccgca gctatcaacc tgtgcgccag gataagcgcc gcttctgttt
    72481 tacctgcgcc agtcacatct tccagaataa ataactgcgg tccttgctgg ctgatatcca
    72541 gatccagcac cttttgctgt aacggtgtcg gattctcaat aaaaggaaac agcgtattaa
    72601 ttccgttgaa aggcgcgact tttgctttta gaggaaagac ggttaaggcg ttttgagcct
    72661 gaattaaagt tttctgccag taacctttaa tatccattgg gtgtgcgacg cgtggaaaaa
    72721 atcgcgttga cgaacccgtc cagtctgcga gcacgacggt tgcagagata taccaggaaa
    72781 ggtgttttat aagttcaatg ccctcatcat catcccagaa tgcggggatc tctatgagcg
    72841 gaaacagtgg tttgatttca aggagaaaat ctcgtgctgc agctttgtct tcaggcagaa
    72901 aattatccaa ttcatccata cgatcagggg gccgaccatg atgccctgtc gtcacgggca
    72961 tccacatttc tatcactcgc ctaagtttgc gcggagagag cgaagatgaa ggaagtaact
    73021 cctgacattc acttaaataa tgattccaca accagtagcc cagcgttgaa tgagagattt
    73081 tttcgtaatt ttttctggca ccttcctgaa tcttgagttc agggggcagg taaagttgtt
    73141 gaaaagagcg ggcaaatttt ccaatatcgt gccagcacag caaccaggcg aaaaattgag
    73201 ccgcctgttc cttgtcagaa atccctaatt gacgaaaata atcagccagc ccgaagcaat
    73261 ttcttttaac cattaaatag cccatcgcgg ctatatccag cgaatgccag caaagaaggt
    73321 gatagtcgtc gcccccgtct ttctcgccgc gtcgggtttt tccccagaaa tcaaaaaaag
    73381 tcac
//
LOCUS       DAPGWB010000004        69586 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.004, whole genome shotgun sequence.
ACCESSION   DAPGWB010000004 DAPGWB010000000
VERSION     DAPGWB010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 69586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 69586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..69586
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.004"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            49..567
                     /locus_tag="RHX79_000235"
     CDS             49..567
                     /locus_tag="RHX79_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDV2195453.1"
                     /translation="MMKFKKCLLPVAMLASFTLAGCQSNADDHAADVYQTDQLNTKQE
                     TKTVNIISILPAKVAVDNSQNKRNAQAFGALIGAVAGGVIGHNVGSGSNSGTTAGAVG
                     GGAVGAAVGSMVNDKTLVEGVSLTYKEGTKVYTSTQVGKECQFTTGLAVVITTTYNET
                     RIQPNTKCPEKS"
     gene            583..1122
                     /locus_tag="RHX79_000236"
     CDS             583..1122
                     /locus_tag="RHX79_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5384 family protein"
                     /protein_id="HDV2195454.1"
                     /translation="MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQH
                     DEWVAERNREIQQEKQRRANAQAAANKRAATAAANKKARQDKLDAEASADKKRDQSYE
                     DELRSLEIQKQKLALAKEEARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGR
                     DLMKSVGKAEENKSDSWFN"
     gene            complement(1217..2794)
                     /gene="guaA"
                     /locus_tag="RHX79_000237"
     CDS             complement(1217..2794)
                     /gene="guaA"
                     /locus_tag="RHX79_000237"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDV2195455.1"
                     /translation="MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
                     QIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEA
                     SNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
                     ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAV
                     ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDM
                     FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
                     GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
                     LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTV
                     FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGIS
                     RVVYDISGKPPATIEWE"
     gene            complement(2863..4329)
                     /gene="guaB"
                     /locus_tag="RHX79_000238"
     CDS             complement(2863..4329)
                     /gene="guaB"
                     /locus_tag="RHX79_000238"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDV2195456.1"
                     /translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLP
                     TTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLV
                     TVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRL
                     RVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGG
                     NVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIP
                     VIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTI
                     DELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS"
     gene            4491..5861
                     /gene="xseA"
                     /locus_tag="RHX79_000239"
     CDS             4491..5861
                     /gene="xseA"
                     /locus_tag="RHX79_000239"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDV2195457.1"
                     /translation="MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPAS
                     GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM
                     QPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVL
                     KRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFND
                     ERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQS
                     TRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQL
                     KRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAETLRVQLSATRERFGNAVTH
                     LEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKNIQPVKK
                     SRKKVH"
     gene            complement(5858..6073)
                     /locus_tag="RHX79_000240"
     CDS             complement(5858..6073)
                     /locus_tag="RHX79_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417005.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HDV2195458.1"
                     /translation="MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVL
                     KACGAVDYFCQHGHGLISKKRVEFVLA"
     gene            complement(6142..7614)
                     /gene="der"
                     /locus_tag="RHX79_000241"
     CDS             complement(6142..7614)
                     /gene="der"
                     /locus_tag="RHX79_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417006.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDV2195459.1"
                     /translation="MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGR
                     AEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAI
                     AKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL
                     PWMEDLAPQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTL
                     TNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVI
                     KTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQV
                     KETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAV
                     EDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMG
                     SPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK"
     gene            complement(7732..8910)
                     /gene="bamB"
                     /locus_tag="RHX79_000242"
     CDS             complement(7732..8910)
                     /gene="bamB"
                     /locus_tag="RHX79_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HDV2195460.1"
                     /translation="MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTP
                     TTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG
                     WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG
                     LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSA
                     VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ
                     IMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWAQSDLLHRLLTSPVLYN
                     GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR
                     "
     gene            complement(8921..9541)
                     /gene="yfgM"
                     /locus_tag="RHX79_000243"
     CDS             complement(8921..9541)
                     /gene="yfgM"
                     /locus_tag="RHX79_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ancillary SecYEG translocon subunit YfgM"
                     /protein_id="HDV2195461.1"
                     /translation="MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNS
                     HQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKN
                     ELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV
                     ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI"
     gene            complement(9559..10833)
                     /gene="hisS"
                     /locus_tag="RHX79_000244"
     CDS             complement(9559..10833)
                     /gene="hisS"
                     /locus_tag="RHX79_000244"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDV2195462.1"
                     /translation="MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLP
                     IVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
                     QRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH
                     VTLELNSIGSLEARANYRDALVAFLEQYKDKLDEDCKRRMYTNPLRVLDSKNPEVQAL
                     LNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
                     GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLV
                     ASGADTQSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEV
                     ANGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG"
     gene            complement(10944..12062)
                     /gene="ispG"
                     /locus_tag="RHX79_000245"
                     /gene_synonym="gcpE"
     CDS             complement(10944..12062)
                     /gene="ispG"
                     /locus_tag="RHX79_000245"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDV2195463.1"
                     /translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEAT
                     VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
                     AMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
                     KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
                     RKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK"
     gene            complement(12089..13102)
                     /gene="rodZ"
                     /locus_tag="RHX79_000246"
     CDS             complement(12089..13102)
                     /gene="rodZ"
                     /locus_tag="RHX79_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoskeleton protein RodZ"
                     /protein_id="HDV2195464.1"
                     /translation="MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTV
                     RDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSL
                     GKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
                     GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV
                     DTAATPAPTATTTPDGAAPLPTDQAGVTTPAADPNALVMNFTADCWLEVTDATGKKLF
                     SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS
                     PAQ"
     gene            complement(13387..14541)
                     /gene="trmG/rlmN"
                     /locus_tag="RHX79_000247"
     CDS             complement(13387..14541)
                     /gene="trmG/rlmN"
                     /locus_tag="RHX79_000247"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HDV2195465.1"
                     /translation="MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQ
                     VMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ
                     RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG
                     AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA
                     LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT
                     IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVL
                     MSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV"
     gene            complement(14691..15122)
                     /gene="ndk"
                     /locus_tag="RHX79_000248"
     CDS             complement(14691..15122)
                     /gene="ndk"
                     /locus_tag="RHX79_000248"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDV2195466.1"
                     /translation="MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTV
                     EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGT
                     LRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR"
     gene            complement(15271..17583)
                     /gene="pbpC"
                     /locus_tag="RHX79_000249"
     CDS             complement(15271..17583)
                     /gene="pbpC"
                     /locus_tag="RHX79_000249"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417014.1"
                     /note="penicillin-binding protein 1C; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase PbpC"
                     /protein_id="HDV2195467.1"
                     /translation="MPRLLTKRGCWITLAAAPFLLFLAAWGADKLWPLPLHEVNPARV
                     VVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARA
                     AWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKIRQLWRALQLEWHLSKREILTLY
                     LNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAA
                     RNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKIVTTL
                     DAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMV
                     NAIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEA
                     LVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAA
                     AYTAFARHGKAGKLRLQPDDPLLERPLMSSGAAWIIRRIMADEAKPLPDSALPRVAPL
                     AWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVNNILLS
                     RSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEG
                     INGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTICP
                     PYGHDAKLPLQLTGVRDGAIIKRLPGATEATLPLQSSGGAGERWWFLNGEPLTERGRN
                     VTLHLTDKGDYQLLVMDDVGQIATVKFVMQ"
     gene            complement(17584..22545)
                     /gene="yfhM"
                     /locus_tag="RHX79_000250"
     CDS             complement(17584..22545)
                     /gene="yfhM"
                     /locus_tag="RHX79_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha2-macroglobulin"
                     /protein_id="HDV2195468.1"
                     /translation="MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSEN
                     ASSAKLSVPERQKLAQQSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIH
                     VVDKKSGKVDGAWELSDNLKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTIT
                     TRDIQPSVGFASRGSLLPGKVVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRN
                     SLANWQSDKLLQMADLVYTGRFDLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAG
                     RYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQA
                     TSDAQGHVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFMFG
                     PRDLYRPGETVILNGLLRDADGKALPNQPIKLDVIKPDGQVLRSVVSQPENGLYHFTW
                     PLDSNAATGMWHIRANTGDNQYRMWDFHVEDFMPERMALNLTGEKTPLTPKDEVKFSV
                     VGYYLYGAPANGNTLQGQLFLRPLREAVSALPGFEFGDIAAENLSRTLDEVQLTLDDK
                     GRGEVSTESQWKETHSPLQVIFQGSLLESGGRPVTRRAEQAIWPADALPGIRPQFASK
                     SVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKKAVSGLQVRLIRERRDYYWNWSE
                     DEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAG
                     YSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWW
                     QEIDVRAQGLDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGVLHLPLGDEN
                     RRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVLNITDYVTPDP
                     WQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKPPVNHVNIVAQQA
                     LPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAPVIAELNMPRF
                     MASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVRTTLFIPVR
                     ALPGYGDGEIQATISGLALPDETVADQQKQWKIGVRPAFPAQTVNYGTALQPGETWAI
                     PADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAA
                     QLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDFLV
                     RAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ
                     KAPLGALREIWEHRADAASGLPLLQLGVALKTMGDATRGEEAIVLALKTPRNSDERIW
                     LGDYGSPLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAAR
                     TIQDLPGKWQAQTSFSAEPLTGEKTLNSNLNSDQLATLQVRNSGDQPLWLRMDASGYP
                     QSAPLPANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLP
                     AGLELENQNLANGSASLEQSGGEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPV
                     TLVYLARAVTPGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP"
     gene            22752..23597
                     /gene="sseA"
                     /locus_tag="RHX79_000251"
     CDS             22752..23597
                     /gene="sseA"
                     /locus_tag="RHX79_000251"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HDV2195469.1"
                     /translation="MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLN
                     GHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAP
                     RAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDV
                     LLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDE
                     LDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLP
                     VEPVK"
     gene            complement(24090..24866)
                     /gene="sseB"
                     /locus_tag="RHX79_000252"
     CDS             complement(24090..24866)
                     /gene="sseB"
                     /locus_tag="RHX79_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708361.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enhanced serine sensitivity protein SseB"
                     /protein_id="HDV2195470.1"
                     /translation="MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGE
                     AVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETL
                     FLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTT
                     LFKTIKSVKRAFICSIKENEEAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPID
                     ICQVKKGEKGISHFITEHIVPFYERRWGGFLRDFKQNRII"
     gene            complement(25008..26291)
                     /gene="pepB"
                     /locus_tag="RHX79_000253"
     CDS             complement(25008..26291)
                     /gene="pepB"
                     /locus_tag="RHX79_000253"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HDV2195471.1"
                     /translation="MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLI
                     QRAARKIDGLGIKHVQLSGEGWDADRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDN
                     RLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGL
                     HTVGRGSERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSD
                     MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNT
                     DAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLAS
                     ASQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGW
                     LHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA"
     gene            complement(26469..26669)
                     /gene="iscX"
                     /locus_tag="RHX79_000254"
     CDS             complement(26469..26669)
                     /gene="iscX"
                     /locus_tag="RHX79_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004104502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HDV2195472.1"
                     /translation="MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDD
                     DPQASNEKILEAILLVWLDEAE"
     gene            complement(26681..27016)
                     /gene="fdx"
                     /locus_tag="RHX79_000255"
     CDS             complement(26681..27016)
                     /gene="fdx"
                     /locus_tag="RHX79_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015683702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HDV2195473.1"
                     /translation="MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEK
                     SCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPR
                     YTINHAREH"
     gene            complement(27018..28868)
                     /gene="hscA"
                     /locus_tag="RHX79_000256"
     CDS             complement(27018..28868)
                     /gene="hscA"
                     /locus_tag="RHX79_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HDV2195474.1"
                     /translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
                     ADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPH
                     LPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYF
                     DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISIL
                     RLSRGVFEVLATGGDSALGGDDFDHLLADYIREQAGIPDRSDNRVQRELLDAAIAAKI
                     ALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVM
                     VGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI
                     PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRS
                     LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE
                     IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAA
                     AHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV"
     gene            complement(28885..29400)
                     /gene="hscB"
                     /locus_tag="RHX79_000257"
     CDS             complement(28885..29400)
                     /gene="hscB"
                     /locus_tag="RHX79_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone HscB"
                     /protein_id="HDV2195475.1"
                     /translation="MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQ
                     LAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREEL
                     DEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNEAWDAAADTVRKLRFLDKLRSS
                     AEQLEEKLLDF"
     gene            complement(29496..29819)
                     /gene="iscA"
                     /locus_tag="RHX79_000258"
     CDS             complement(29496..29819)
                     /gene="iscA"
                     /locus_tag="RHX79_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HDV2195476.1"
                     /translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
                     VDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCG
                     ESFHV"
     gene            complement(29836..30222)
                     /gene="iscU"
                     /locus_tag="RHX79_000259"
     CDS             complement(29836..30222)
                     /gene="iscU"
                     /locus_tag="RHX79_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HDV2195477.1"
                     /translation="MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQ
                     IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV
                     KIHCSILAEDAIKAAIADYKSKREAK"
     gene            complement(30250..31464)
                     /gene="iscS"
                     /locus_tag="RHX79_000260"
     CDS             complement(30250..31464)
                     /gene="iscS"
                     /locus_tag="RHX79_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDV2195478.1"
                     /translation="MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFG
                     WQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
                     EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV
                     QDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
                     RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNR
                     LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE
                     PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ
                     GVDLNSIEWAHH"
     gene            complement(31576..32064)
                     /gene="iscR"
                     /locus_tag="RHX79_000261"
     CDS             complement(31576..32064)
                     /gene="iscR"
                     /locus_tag="RHX79_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HDV2195479.1"
                     /translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
                     LFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGD
                     KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRIQDAIDVKL
                     RA"
     gene            complement(32365..33102)
                     /gene="trmJ"
                     /locus_tag="RHX79_000262"
     CDS             complement(32365..33102)
                     /gene="trmJ"
                     /locus_tag="RHX79_000262"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HDV2195480.1"
                     /translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS
                     QAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
                     EAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
                     LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTR
                     ARPESQELNILRGILASIEQQNKGNKA"
     gene            33221..34024
                     /gene="suhB"
                     /locus_tag="RHX79_000263"
     CDS             33221..34024
                     /gene="suhB"
                     /locus_tag="RHX79_000263"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HDV2195481.1"
                     /translation="MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVD
                     KAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVS
                     IAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK
                     AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGEL
                     LVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR"
     gene            34169..35023
                     /locus_tag="RHX79_000264"
     CDS             34169..35023
                     /locus_tag="RHX79_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417029.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV2195482.1"
                     /translation="MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGP
                     DPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLP
                     ERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGA
                     NILDVIGRGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIP
                     LLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFI
                     LSALNPQN"
     gene            35214..36494
                     /gene="csiE"
                     /locus_tag="RHX79_000265"
     CDS             35214..36494
                     /gene="csiE"
                     /locus_tag="RHX79_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary phase inducible protein CsiE"
                     /protein_id="HDV2195483.1"
                     /translation="MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATTATFSELNGVDD
                     DIASLDISETGQEILRYHQLTLTAGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFI
                     TSHFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
                     LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSML
                     RVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSFF
                     AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN
                     DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAP
                     YTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA"
     gene            complement(36486..37625)
                     /locus_tag="RHX79_000266"
     CDS             complement(36486..37625)
                     /locus_tag="RHX79_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HDV2195484.1"
                     /translation="MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLL
                     LGAGLVARFLGSLLIAPRVSDPSRLISALRVLALLTLLFAVAFWAGAHVAWLMLVMIG
                     FNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYQVIL
                     ALLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVLQNWRFLACVCLLQGAH
                     AAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAIC
                     GVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA
                     MGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC"
     gene            complement(37785..38675)
                     /gene="hcaR"
                     /locus_tag="RHX79_000267"
     CDS             complement(37785..38675)
                     /gene="hcaR"
                     /locus_tag="RHX79_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HcaR"
                     /protein_id="HDV2195485.1"
                     /translation="MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVG
                     VPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEV
                     NLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELF
                     DEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNI
                     VQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEM
                     KPALRDFIAIVQERLASVTA"
     gene            38811..40172
                     /locus_tag="RHX79_000268"
     CDS             38811..40172
                     /locus_tag="RHX79_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HDV2195486.1"
                     /translation="MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWL
                     FLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRA
                     FTCPYHGWSYGINGELIDVPLEPRTYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSA
                     PGLRDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCNWKFPAEQFASDQYHALFSH
                     ASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWV
                     DGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVE
                     VWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKL
                     CLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQE
                     VMK"
     gene            40169..40687
                     /locus_tag="RHX79_000269"
     CDS             40169..40687
                     /locus_tag="RHX79_000269"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit beta"
                     /protein_id="HDV2195487.1"
                     /translation="MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTM
                     RTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNC
                     QISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ
                     AVITSHNLSVLF"
     gene            40687..41007
                     /locus_tag="RHX79_000270"
     CDS             40687..41007
                     /locus_tag="RHX79_000270"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-phenylpropionate/cinnamic acid
                     dioxygenase ferredoxin subunit"
                     /protein_id="HDV2195488.1"
                     /translation="MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSH
                     GNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLP
                     EAQP"
     gene            41004..41816
                     /gene="hcaB"
                     /locus_tag="RHX79_000271"
                     /gene_synonym="phdD"
                     /gene_synonym="yfhX"
     CDS             41004..41816
                     /gene="hcaB"
                     /locus_tag="RHX79_000271"
                     /gene_synonym="phdD"
                     /gene_synonym="yfhX"
                     /EC_number="1.3.1.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate-dihydrodiol/cinnamic
                     acid-dihydrodiol dehydrogenase"
                     /protein_id="HDV2195489.1"
                     /translation="MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVA
                     SLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPA
                     ETLETGFHELFNVNVLGYLLGAKACAPALISSEGSMIFTLSNAAWYPGGGGPLYTASK
                     HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAIL
                     PLQFFPQPADFTGPYVMLASRRNNRALSGVMINADAGLAIRGIRHVAAGLDL"
     gene            41826..43028
                     /locus_tag="RHX79_000272"
     CDS             41826..43028
                     /locus_tag="RHX79_000272"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylpropionate dioxygenase ferredoxin
                     reductase subunit"
                     /protein_id="HDV2195490.1"
                     /translation="MKEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYER
                     PPLSKSMLLEDSPQLQQVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWD
                     QLFIATGAAARPLPLLDALGERCFTLRHAGDAARLREVLQPERSVVIVGAGTIGLELA
                     ASATQRRCKVTVIELAATVMGRNAPPPVQRYLLQRHQQAGVRILLNNAIEHVVDGEKV
                     ELTLQSGETLQADVVIYGIGISANEQLAREANLDTANGIVIDEACRTCDPAIFAGGDV
                     AITRLDNGALHRCESWENANNQAQIAAAAMLGLPLPLLPPPWFWSDQYSDNLQFIGDM
                     RGDDWLCRGNPETQKAIWFNLQNGVLIGAVTLNQGREIRPIRKWIQSGKTFDAKLLID
                     ENIALKSL"
     gene            43125..43547
                     /locus_tag="RHX79_000273"
     CDS             43125..43547
                     /locus_tag="RHX79_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDV2195491.1"
                     /translation="MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQ
                     YMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDM
                     TGDAVGPNLINFWKNVSIAGAFLLLAITGPGAISLDRR"
     gene            complement(43595..44467)
                     /locus_tag="RHX79_000274"
     CDS             complement(43595..44467)
                     /locus_tag="RHX79_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HDV2195492.1"
                     /translation="MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATD
                     ASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLC
                     LVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQ
                     AQASGYWLEREQWLAGEFCEQLPQELDFNQLAPLPRQWVNNGFAGWNGQARIEQPQEG
                     YAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPG
                     ESTTSEMSLRVEWL"
     gene            complement(44479..45573)
                     /locus_tag="RHX79_000275"
     CDS             complement(44479..45573)
                     /locus_tag="RHX79_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HDV2195493.1"
                     /translation="MKINRIVNEGFMKTMLAAYLPGNSTVDLREVAVPTPGINQVLIK
                     MKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDR
                     VLVYHISGCGFCPNCRRGFPISCTGKGKAAYGWQRDGGHAEYLLAEEKDLILLPDALS
                     YEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDM
                     LPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALQSTA
                     DWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWPRNAI
                     THRFSLEQAGDAYALMASGKCGKVVINFPD"
     gene            complement(45606..46604)
                     /locus_tag="RHX79_000276"
     CDS             complement(45606..46604)
                     /locus_tag="RHX79_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2195494.1"
                     /translation="MSASSLPLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNA
                     PGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEV
                     PLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVDTLGLWSALRGMGLFMTNALPVPID
                     ENEVLDWLGGQFLGVPVSALIMMVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGIN
                     VRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRG
                     SLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR"
     gene            complement(46629..48140)
                     /locus_tag="RHX79_000277"
     CDS             complement(46629..48140)
                     /locus_tag="RHX79_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDV2195495.1"
                     /translation="MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGK
                     NGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEG
                     LTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEI
                     ARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASC
                     ATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKP
                     KLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDM
                     LKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMT
                     VKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVREL
                     AAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHSPVNVDELMSAILSVH"
     gene            complement(48163..49146)
                     /locus_tag="RHX79_000278"
     CDS             complement(48163..49146)
                     /locus_tag="RHX79_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDV2195496.1"
                     /translation="MPKKMRTTRNLLLMGTLLGSALFARTADKEMTIGAIYLDTQGYY
                     AGVRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSS
                     RTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKID
                     QPKIAVINCEAFEVCVQRRKGFEEVLKSRVPGAQIVANQEGTVLDKAISVGEKLIIST
                     PDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDIS
                     GKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATHVDGLP"
     gene            complement(49243..52524)
                     /locus_tag="RHX79_000279"
     CDS             complement(49243..52524)
                     /locus_tag="RHX79_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5107 domain-containing protein"
                     /protein_id="HDV2195497.1"
                     /translation="MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYG
                     VTDTLSEQKTLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPA
                     LVGLLGPWISGGIEFNWPQHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMT
                     GFTLRPDRAALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKR
                     AVSAFPIATGTYYKVDYSAGVDISRYKNVPVPTSYMAEKSQYDFVGAWCHDEDGGLLH
                     VANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEE
                     KRFEQYFLPYHSLGMVQNASRDAVIKLQRSKRGIEWGLYAISPLNGYRLAIREIGKCN
                     ALLDDAVALMPATAIQGVLHGINPERLTIELSDADGNIVLSYQEHQPQELPLPDVAKA
                     PLAAQDITSTDEAWFIGQHLEQYHHASRSPFDYYLRGVVLDPLDYRCNLALAMLEYNR
                     ADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGN
                     SKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARV
                     QREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLCQGRDVNALMTAGQLINWGMPTL
                     AAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVAALESI
                     EECWFARHLLACFYYNKRSYNKAITLWQRCVEMSPEFADGWRGLAIHAWNKQHDYELA
                     ARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLN
                     LWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQHLDAREPQQASELL
                     HAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEAMRCLRLAATGDRTINIHS
                     YYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEADFFAVSQPDLL
                     SLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAALFTTVMPFI
                     FNYVH"
     gene            52642..53835
                     /locus_tag="RHX79_000280"
     CDS             52642..53835
                     /locus_tag="RHX79_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HDV2195498.1"
                     /translation="MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAV
                     SNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACL
                     SPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT
                     MPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIG
                     SSFVINEQIYRGSLYGSGQIGHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLK
                     SQPVSTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWL
                     YGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEA
                     QLRQI"
     gene            complement(53899..55152)
                     /gene="glyA"
                     /locus_tag="RHX79_000281"
     CDS             complement(53899..55152)
                     /gene="glyA"
                     /locus_tag="RHX79_000281"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDV2195499.1"
                     /translation="MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN
                     FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEK
                     QAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP
                     HAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVAL
                     KEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEAD
                     AALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS
                     INDEAVIERIKGKVLDICARYPVYA"
     gene            55480..56670
                     /gene="hmpA"
                     /locus_tag="RHX79_000282"
     CDS             55480..56670
                     /gene="hmpA"
                     /locus_tag="RHX79_000282"
                     /EC_number="1.14.12.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NO-inducible flavohemoprotein"
                     /protein_id="HDV2195500.1"
                     /translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN
                     MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHL
                     LATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAK
                     TPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYR
                     IAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLA
                     MLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAK
                     GQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGP
                     HKVL"
     gene            complement(56715..57053)
                     /gene="glnB"
                     /locus_tag="RHX79_000283"
     CDS             complement(56715..57053)
                     /gene="glnB"
                     /locus_tag="RHX79_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HDV2195501.1"
                     /translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
                     LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
                     RTGEEDDAAI"
     gene            complement(57114..58448)
                     /gene="glrR"
                     /locus_tag="RHX79_000284"
     CDS             complement(57114..58448)
                     /gene="glrR"
                     /locus_tag="RHX79_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator GlrR"
                     /protein_id="HDV2195502.1"
                     /translation="MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRV
                     LNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFS
                     FLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSV
                     LINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVS
                     NREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISAT
                     HRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVR
                     AFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFV
                     EARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
     gene            complement(58438..59151)
                     /gene="qseG"
                     /locus_tag="RHX79_000285"
     CDS             complement(58438..59151)
                     /gene="qseG"
                     /locus_tag="RHX79_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system QseEF-associated
                     lipoprotein QseG"
                     /protein_id="HDV2195503.1"
                     /translation="MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIP
                     VYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQ
                     NTFKQGILLADAKITPYERRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEER
                     QRYGKLQQASDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDT
                     PHEGEKPAPSTHEVTPDEP"
     gene            complement(59315..60742)
                     /gene="qseE"
                     /locus_tag="RHX79_000286"
     CDS             complement(59315..60742)
                     /gene="qseE"
                     /locus_tag="RHX79_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417051.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two component system sensor histidine kinase
                     QseE/GlrK"
                     /protein_id="HDV2195504.1"
                     /translation="MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQA
                     ALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHA
                     GVLPDDKLYQALRQDLNNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSR
                     GQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLG
                     NSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLA
                     DQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETV
                     VSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSS
                     HGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQG
                     ELYLVDESGQDVCFRIELPSSKNTK"
     gene            complement(61318..65205)
                     /gene="purL"
                     /locus_tag="RHX79_000287"
                     /gene_synonym="purI"
     CDS             complement(61318..65205)
                     /gene="purL"
                     /locus_tag="RHX79_000287"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HDV2195505.1"
                     /translation="MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLN
                     APLNDDEHAQLERLLKYGPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ
                     VNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFALDDAEQLFAHHQPTPVTS
                     VDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCR
                     HKIFNADWVIDGEQQPKSLFKMIKNTFETTPDYVLSAYKDNAAVMEGSEVGRYFADHE
                     TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
                     FSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALNGYFRTY
                     EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGG
                     GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL
                     SNAMPELVSDGGRGGKFELRDILNDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL
                     CKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD
                     ALVREGITIADAVKRVLHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAV
                     TTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW
                     MAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPL
                     SLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPAD
                     VRNVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGINADIASLGD
                     DRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQT
                     VFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVA
                     APYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHAL
                     VACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRE
                     LIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR
                     DAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITSITTESGRVTIMMPHPE
                     RVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG"
     gene            65463..67019
                     /gene="mltF"
                     /locus_tag="RHX79_000288"
     CDS             65463..67019
                     /gene="mltF"
                     /locus_tag="RHX79_000288"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417053.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HDV2195506.1"
                     /translation="MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGE
                     LRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNA
                     DLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVV
                     VNDLQTLKDTKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELA
                     VALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVD
                     TRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLT
                     KNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHML
                     DARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS
                     LVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLF
                     SRKGSEEKQN"
     gene            complement(67016..67552)
                     /gene="tadA"
                     /locus_tag="RHX79_000289"
     CDS             complement(67016..67552)
                     /gene="tadA"
                     /locus_tag="RHX79_000289"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HDV2195507.1"
                     /translation="MRRAFITGVFFLSEVEFSHEYWMRHALTLAKRAWDEREVPVGAV
                     LVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCA
                     GAMIHSRIGRVVFGAHDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFF
                     RMRRQEIKAQKKAQSSTD"
     gene            complement(67577..68212)
                     /gene="yfhb"
                     /locus_tag="RHX79_000290"
     CDS             complement(67577..68212)
                     /gene="yfhb"
                     /locus_tag="RHX79_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417055.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase C"
                     /protein_id="HDV2195508.1"
                     /translation="MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPL
                     LPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQE
                     RLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCL
                     GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE"
     gene            68421..69269
                     /locus_tag="RHX79_000291"
     CDS             68421..69269
                     /locus_tag="RHX79_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417056.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDV2195509.1"
                     /translation="MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEA
                     GVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL
                     IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN
                     AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN
                     ALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA
                     LVKKLV"
     gene            69325..69585
                     /gene="yfhL"
                     /locus_tag="RHX79_000292"
     CDS             69325..69585
                     /gene="yfhL"
                     /locus_tag="RHX79_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster ferredoxin YfhL"
                     /protein_id="HDV2195510.1"
                     /translation="MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGH
                     YETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI"
BASE COUNT        16514 a        19200 c        17538 g        16334 t
ORIGIN      
        1 tgatgatctt aaatgtctta tttttcgtaa tgtgtataac aaggaatagt gatgaaattt
       61 aaaaaatgtc ttctgcctgt ggcaatgtta gcgtcattca ctctggcagg atgccagtca
      121 aatgctgacg atcatgccgc cgatgtttat caaaccgatc aactgaatac caaacaagaa
      181 actaaaaccg ttaatattat ttccattctt cccgcaaaag ttgccgtaga caactcccaa
      241 aataaacgga acgcacaagc cttcggcgcg cttattggcg cagtcgctgg cggtgttatc
      301 ggccacaacg tcggttctgg cagcaattcc ggaacgacgg caggggcagt tggcggcgga
      361 gctgtaggcg cggcagtggg ttctatggtg aatgataaaa ccttagtgga aggtgtttct
      421 ttaacatata aggaaggcac caaagtgtat acctctaccc aggtgggtaa agagtgccag
      481 tttacgacag gtttagccgt tgttattacc acaacgtata acgaaacgcg tattcagcca
      541 aatactaaat gtcctgaaaa gagctaataa tcaggaggag tcatgaagaa agtttttctt
      601 tgcgccatct tggcctcctt aagctatccg gctatcgcct catcattgca ggatcaactc
      661 tctgctgtag cagaagctga acagcaaggt aaaaatgaag agcaaaggca gcatgacgaa
      721 tgggtcgcgg agcgcaacag ggaaatccag caagagaagc aacgtcgcgc aaatgcccag
      781 gccgccgcta acaaaagagc ggcaacggca gcggcaaata agaaagctcg tcaggataaa
      841 ctggacgccg aagcctctgc ggacaaaaaa cgcgatcaaa gttatgaaga tgagctacgc
      901 agcttagaga ttcagaaaca aaaactggcg ctggcaaaag aagaagcccg cgttaagcga
      961 gaaaacgaat ttatcgatca ggaactgaag cacaaagctg cgcaaaccga tgtggtgcaa
     1021 tctgaagctg acgccaacag aaatatgact gaaggcggtc gcgatctgat gaaaagcgtg
     1081 ggcaaagcag aagagaacaa atcggacagc tggtttaatt aatcgatgtt agtaacttca
     1141 agcctatgat tcttgaagat aaaaaaccct ctgtagtaac agagggtttt gttcattcat
     1201 agtgcaggga ttaaaatcat tcccactcaa tggtagctgg cggcttgccg ctgatgtcat
     1261 acaccacgcg ggaaataccg ttcacttcat tgataatgcg gttggaaacg cgaccgagga
     1321 aatcgtacgg cagatgcgcc cagtgtgcgg tcataaagtc gatggtttcg acagcacgca
     1381 gagagacaac ccagtcatac ttacgaccat cgcccattac gccaacggaa cgtaccggca
     1441 ggaacacagt gaacgcctgg ctgactttgt cgtacaggtc cgctttacgc agttcttcaa
     1501 tgaagatggc gtcagcacgg cgcagcaggt cacagtactc tttcttcact tcacccagca
     1561 cacgaacgcc aaggcctggt cccgggaacg ggtgacggta cagcatgtcg tacggcaggc
     1621 ccagctccag accaatctta cgcacttcgt ctttgaacag ctctttcagc ggttcaacca
     1681 ggcccatctt catctctttc ggcaggccgc ccacgttgtg gtgagatttg atgacgtgtg
     1741 ctttaccggt tgcagaagcc gcagattcga taacgtcagg gtagatggtg ccctgcgcca
     1801 gccacttcac gtcttccagt ttcagcgctt cttcatcgaa tacttcaacg aaaacgcgcc
     1861 cgatgatttt acgttttgct tccggatcgt tttcgccagc cagcgctgac aggaagcgat
     1921 cttctgccgg tacgtgaaca atgttaagac caaagtgatc gccaaacata tccagaacct
     1981 gctctgcttc gttgagacgc agcaggccgt tgtcgacgaa tacgcaagtc aggtttttac
     2041 cgatagcgcg gtgcagcagc attgcggtta cggaggaatc cacaccacca gagaggccga
     2101 ggatgacttt atcgtcgcct acctgctcgc ggatgcgagc tacagcatcg tcgataattt
     2161 tcgctggcgt ccacagggct tcacactggc agatatcacg cacaaaacgc tccagcatgc
     2221 gcataccctg gcgggtgtga gtcacttccg ggtggaactg tacgccatag aagcgttttt
     2281 cttcgttagc cataatggca aacgggcagc tttcggtgct ggctacggtg acgaagtcgg
     2341 acgggatagc ggtaacttta tcgccgtggc tcatccagac atcgagcagc ggtttaccgt
     2401 ctgcggtcag cgcatcttcg ataccgcgaa ccagtgcgct gtcgtttacg acttcaacct
     2461 gcgcgtagcc aaattcacgt tcgttagagg cttcaacgtg accgcccaac tgcattgcca
     2521 tggtttgcat gccatagcaa acgccgaata ccggtacgcc tgcttcaaag acatactgcg
     2581 gcgcacgcgg gctgttttct tcggtggtgc tttccgggcc gccggaaaga ataatgccgc
     2641 ttggattgaa gtcacgaatt tgtgcttctg tcacatccca cgcccacagt tcgcagtaaa
     2701 cacccagctc acgcacgcgg cgcgcaacca gttgagtgta ctgagaaccg aagtccagaa
     2761 tgaggatgcg atgcttatga atgttttccg tcattgacgc ttattccgag gcaagtgaaa
     2821 cagataatat aaatcgcccg acatgaagtc gggcgaagag aatcaggagc ccagacggta
     2881 gttcggggac tctttagtaa tggtcacgtc gtgaacgtgg ctttcctgaa tgcccgcacc
     2941 gctgatacgt acaaactccg ctttagtacg cagttcgtcg atagtaccac agccggtcag
     3001 acccatacag gagcgcaggc cgcccatctg ctggtgaatg atctctttca ggcgaccttt
     3061 ataagctacg cgaccttcga taccttccgg caccagtttg tcggcagcgt tatcgctctg
     3121 gaaataacgg tcagaggaac ctttggacat cgcgcccagg gaacccatac cacggtaaga
     3181 tttgtaagaa cggccctggt agagttcgat ttcacccgga gattcttcag tacccgccag
     3241 catggaaccc accattaccg cgcttgcgcc agcggcgata gctttggcga tgtcgccgga
     3301 gaagcgaata ccaccatctg cgataaccgg aataccggtg ccttccaggg cttcaactgc
     3361 gtcagcaacg gcagtgatct gcggaacacc tacgccagta acgatacgag tcgtacagat
     3421 agaaccaggg ccgataccga ctttaaccgc gctgcaacca gcttctgcca aagcgcgtgc
     3481 acctgcagct gttgccacgt tgccgccgat gatttgcaga tccggatatt tagcacgggt
     3541 ttcacggata cgctgcaaaa cgccttctga gtgaccgtgg gaggagtcga tcagcagaac
     3601 gtcaacgcca gcggcaacca gcgcgtcaac acgctcttcg ttacccgcac ctgcgccaac
     3661 tgcagcacca acacgcagac ggccttgctc gtctttacag gcgttcggtt tacgttccgc
     3721 tttctggaag tctttcacgg tgatcatgcc gatcaggtgg aattcgtcat caaccaccag
     3781 cgctttttca acgcgttttt cgtgcatttt tgccagcacc acttcacggg cttcaccttc
     3841 acgcacggtg accagacgct ctttcggcgt catgtaaacg ctaaccggct ggttcaggtc
     3901 ggtaacaaaa cgcacgtcac gaccggtgat aatacccacc agttcgtttt cttcggtaac
     3961 gaccggatag cccgcaaaac cgttacgctc agtcagttct ttcacttcgc gcagcgtcgt
     4021 ggttggcaga acagtctgcg gatcagtcac cacaccagat tcgtgttttt tcacacggcg
     4081 aacttcttct gcctggcgtt caatggacat gtttttgtgg ataaagccga taccgccttc
     4141 ctgagccaga gcaatagcca ggcgcgcttc cgttacggta tccattgctg cggaaagcat
     4201 agggatattc agacgaatag ttttcgtcag ctgggtgctg aggtcagcag tattcggcag
     4261 aacggtagaa tgagcaggaa cgaggagaac gtcgtcaaac gtcagagctt ctttagcgat
     4321 acgtagcatg ggcaatatct cgaccagagt ggttaataaa tattgccgcg gcattataca
     4381 gagcgtaacc gattgcatct accccttttt gcaaaaaatg cttgctatcc ccgaagggcg
     4441 ggttactatc gactgaataa cctgctgatt tagaatttga tctcgctcac atgttacctt
     4501 ctcaatcccc tgcaattttt accgttagtc gcctgaatca aacggttcgt ctgctgcttg
     4561 agcatgagat gggacaggtt tggatcagcg gcgaaatctc taatttcaca caaccggctt
     4621 ccggtcactg gtactttaca ctcaaagacg acaccgccca ggtacgctgc gcgatgttcc
     4681 gcaacagcaa ccgccgggtg accttccgtc cacagcatgg acaacaagtt ttagttcgcg
     4741 ccaatattac gctctacgag ccgcgcggtg actaccagat aatcgttgag agtatgcagc
     4801 cggccggtga agggctgctg caacagaagt acgaacagct caaagcgaag ttgcaggctg
     4861 aaggtttgtt cgatcagcaa tacaaaaaac cacttccctc ccctgcgcat tgcgttggtg
     4921 tgatcacctc aaaaaccggt gctgcgctac atgatatttt gcatgtgtta aaacgtcgcg
     4981 atccttctct accggtgatc atctacccca ccgccgttca gggcgatgac gcaccggggc
     5041 aaattgttcg cgccattgaa ctggcgaatc agcgcaatga gtgcgacgtg ttgatcgttg
     5101 ggcgcggcgg cggttcgctg gaagatttat ggagttttaa cgacgaacgc gtagcgcggg
     5161 cgatttttgc cagccgcatt ccggtcgtca gcgccgtcgg gcatgagacg gatgtgacca
     5221 ttgccgattt tgttgccgat ctgcgtgcgc caacgccgtc tgccgccgct gaagtagtga
     5281 gccgtaatca gcaagagtta ctgcgccagg tgcaatcgac ccgtcaacgg ctggagatgg
     5341 cgatggatta ttatctcgcc aaccgcacgc gtcgctttac gcagatccat caccgattac
     5401 agcaacagca tccgcagctc cggctggcac gccagcaaac catgcttgag cgcctgcaaa
     5461 agcggatgag ctttgcgctg gaaaatcaac ttaagcgtac cgggcaacag cagcagcggt
     5521 taacacagcg gctgaatcag caaaatccac agccgaagat tcatcgcgcg caaacgcgca
     5581 ttcagcaact ggaatatcgt ttagcagaaa ccctgcgcgt acagcttagc gccacgcgtg
     5641 aacgtttcgg taatgcagta acgcacctcg aagccgtaag cccactgtca acgctggcgc
     5701 gtggatacag cgttactact gctactgacg gcaatgtact gaaaaaagtg aagcaagtta
     5761 aagcgggtga aatgctaacc acacgtctgg aagacggctg gatagaaagt gaagttaaaa
     5821 acatccagcc agtaaaaaaa tcgcgtaaaa aggtgcatta agccagcacg aattcaacgc
     5881 gttttttcga tatcaagcca tgcccgtgct gacagaagta atctactgca ccgcaggctt
     5941 ttaacacctg caacggttga tggcagtctg gacaaagagc tttcatttca ataatttccc
     6001 cgcaggatgg gcaacgcgca tggccgttat cctgatcaag cacatgctga cattgtggac
     6061 aatgcagttc catatgaatt cctccggtag ccatccctct acattcatag agggaatggc
     6121 agataaaata cttacggata attatttatt tttcttgatg tgcttcatca gacgcttacg
     6181 tttacgcatc tgggttggcg tcagggtgtt acgcttgttc gcatacgggt tttccccttc
     6241 tttgaactga atacgaatcg gcgatcccat tacgtccagc gatttgcgga agtagttcat
     6301 caagtagcgc ttgtaggaat caggcaggtc tttcacctga ttaccgtgaa tcaccacaat
     6361 cggcgggtta taaccaccag cgtgggcata tttcagcttc acacgacgac cgcgtaccag
     6421 cggcggttgg tgatcttcaa cagccatcgt catgatgcgc gtcagcatag aggtccccac
     6481 acgacgggtg gagctgtcat acgcttcacg tactgattca aacaagttac caacaccact
     6541 gccgtgcaag gcagagataa agtgcacacg agcaaaatcg ataaagccca gacggaagtc
     6601 cagcgtttct ttcacctgct ctttcacttc ctggctcagg ccatcccact tattcaccac
     6661 aatgacaagt gagcgcccac tattgagaat aaagcccagc agcgagagat cctgatcgga
     6721 aataccttcg cgcgcatcaa tcactaacat caccacgttg gcatcttcaa tggcctgcaa
     6781 cgttttgatt acggagaatt tctctacagc atcggtgatt ttgccgcgtt tacgtacgcc
     6841 agcggtatca atgagcacat actcacgtcc atcgcgttcc attggaatgt agatactgtc
     6901 acgcgtcgtg ccaggcatgt cataaacaac aacgcgctct tcaccaagaa tacggttagt
     6961 gagtgtagac ttacctacgt tcggacgacc cacaatcgcc agtttgatcg gcagactttg
     7021 cgggtcgaag tcgtcttcct cttcttcttc gccgttctct tccgcttcaa attgcgccca
     7081 gtattcagcg tcttcgtcga cttcctcttg cggtgcgaga tcttccatcc acggcagcag
     7141 cacatgctcc agcagactta atacgccacg accgtgagac gcggcgatcg ggtagatttc
     7201 acctaaacca agcgagtaga aatcaaccac tgcctgatcg ggatccagac cgtcagtttt
     7261 gtttgccacc aggaaggtcg gtttttcacg ggagcgcaga tgtttggcaa tcgcttcatc
     7321 tgccggcatc aggcccgcgc gcgcatccac cataaacagt acgacgtccg cttcttcaat
     7381 cgccagcagc gactgttccg ccatgcgggt ttctacaccg tcttctgtgc catcaatccc
     7441 gccggtatca atacagataa actcacggcc ttcaatttcc gcacgaccgt acttacggtc
     7501 acgagtcaga cccgggaaat ccgcaaccag cgcatctcgg gtgcgagtta gacggttaaa
     7561 taacgtggat tttcctacgt tagggcgccc gacaagcgcg accacaggta ccatgtttaa
     7621 agcctcattt ttataaatca tcagacaacg cacgctatat tcgcgtcgtt gttaaaaaca
     7681 ggaaaacggc ccctgtccag gagccgtttt caaagtgaac gacagagacg attaacgtgt
     7741 aatagagtac acggttccgt cttttgcctg gatcagcagt ttgccgtcag cggcaaccgg
     7801 ttcagtctgg aaaccggaac tatcaacttt ttgctgggca acgaaacgac catcttcgac
     7861 gttaatccag tgcagataac cttcactgtc accgaccacc aggttgccat tatacagcac
     7921 cggagaagtc agcaggcgat gcagcagatc gctttgtgcc cacagcgtaa cgccgccatc
     7981 aatggtcaac gccatcaccc ggtcattttg atcgaccaga tagatgcgat tgccgtcgac
     8041 gatgaaatca ttcaccgaac ccagttcgcg tttccacata atctgaccac tgcgcagatc
     8101 aagcgccgtc aggttaccat tataggccag cgcgaaaaca acgccgttaa caacgacggg
     8161 agtcgtgtca acatcgctca gacggtcaat ttcggtagaa ccggtcgcct gggaaatacg
     8221 ctgctgccaa atcatctggc cctgttccat cagcactgcg ctgacgcgac cattatcgcc
     8281 ccccacgacg gccgcaccaa aagccgttgc cggcgcagac tcgccacgca aagagagcga
     8341 aggcatatcg aggttaactg tccatttgac agcgccgtca gcttcgttca gcgcttgtaa
     8401 ctgaccgtta ctggtgtgga ttaacaccag accgtcgctg accaccgggc gcgaaagtgc
     8461 ttcacccgcg actttagttt gccatgccac agtaccatcg ctggtattca gcgcgtaaac
     8521 ctgcgccttt tcgctgccaa tgtagacatg cccaccagac acggtcacac cgccagaaag
     8581 taatgcaggc tctttagaga accagccatc tttctcggcc aggctgacag accagatttc
     8641 tttgccatca tccgcattca gcgcttttac caaaccagcg cggtccgctg catagacaac
     8701 gttgtccgcc agtgccggat gaagattgga atagaagttg ccaatgccgc taccaacgga
     8761 agtactccac gccgtggtcg gcgtaaactg gttttcaacg gttggcaatg gggacatctt
     8821 taccacatct tcttcgctgt taaacagcga acagccgctt aaaagggtaa cggaaagcag
     8881 tcctggcagc agtaatttac gcaattgcat cgggtccctc tcagatggac aaattattaa
     8941 ttttcatctg catcatttcg ctcagtgccg gagtaacatc gcttttcacg cctgcttccc
     9001 atgcactacg cgcaccttgc ttatcacctt tgctcagcaa tgcttcacca cgcaggtcgg
     9061 caacaatggc agcccaccct tcacctttga tggtatcaag ggttttcagc gcggcatcag
     9121 cctgcttgag ctgtacctga acgcgagcaa gacgcagatt tatcacggct ttgagatttt
     9181 catcgctcgt gtctgccagc ccctgttgta actgggcggc agctttctct agttcatttt
     9241 tgtcaacaaa ttgctgcgca agttccaaag aagccagcgc accataagta tttttatttt
     9301 cagcagcaaa tttttccgcc gccgggatgc tatccggttt gccttcgctc actgcggtaa
     9361 ccgcattttg ataggcaaga gaagcggagc gtgcagaatc aacctgatgg ctgttccagt
     9421 agcgccagcc aatcagtgcg ccaacgccca aaatcacccc aacagccagt gctttgccat
     9481 tttcagcaaa aaagcgttta accgcttcta cctggtcgtt ttcgttctcg taaatttcca
     9541 cgctgtcctt ctccttcctt aacccagtaa cgtgcgcaaa tgcgcggcta cgctatcctg
     9601 cgcaactgcc gtttgctcac cagagcgcaa atccttcact actgctgtgc cgttagccac
     9661 ttcagactca cccagcacca cagcaacgcg ggcaccccat ttatcagcac gggcaaactg
     9721 tttcttaaag ttgccgccgc cgtggttggt catcaatttc acgcccggta attcatcacg
     9781 cagacgctca gctaatgcca tagccgcaga ttgtgtatca gcacctgaag ccaccaggta
     9841 tatatcgaca acaggatcgg ctttaaattc cggattaacg gcctgtacta acaatacaag
     9901 acgttcgagg cccatcgcaa aaccgacagc cggtgttgca cgaccgccca gttgttccac
     9961 aagaccgtca taacgaccgc ctgcacacac ggtgccctgg gagccgagac tgttagtcac
    10021 ccactcgaaa acggtacggt tatagtaatc cagaccacgc accagacgct ggtttacggt
    10081 gtaagcgatc cccgcgctct caagcagttt gcacagaccg gcaaaatgct cacgagattc
    10141 ctcgtccaga taatcaccta atgccggagc gtcgttgaga agcgcctgca cttccggatt
    10201 ttttgaatcc agcacgcgca gcgggttagt gtacatgcgg cgtttgcagt cttcgtccag
    10261 cttatcttta tactgctcaa ggaatgccac cagcgcatcg cggtaattgg cgcgtgcttc
    10321 cagcgaaccg atagagttca gctcaagagt tacgtgctcg gaaataccca gcgcacgcca
    10381 ccagcgggcg gtgagcataa tcagttcagc gtcgatatcc ggaccttgca gaccgaaaac
    10441 ttcgcagccc aactgatgga actgacgata acgccctttc tgcggacgct cgtgacggaa
    10501 catcggcccg atataccaca gacgctgttc ctgattgtac agaagaccat gctcgatgcc
    10561 ggcgcgtaca cagcccgccg tcccttcagg gcgcagagtc aggctgtcgc cattgcgatc
    10621 ctcaaaggtg tacatctctt tttcaaccac gtcggtgact tcaccaatcg cacgtttgaa
    10681 tagcggggtc tgctctacaa tcggcaagcg gatttcactg taaccgtagc tgccgagcac
    10741 gtttttcagt gtgccttcaa tgcgctgcca gatggccgtt tcgccaggca ggtaatcgtt
    10801 catgccgcga atggcttgaa tgttttttgc cacgtttatt ctctttctga atataaaaat
    10861 gaaccctcaa cgcttccctc aatgtttcgg gagctatgcg ggttcaatca tacacgggaa
    10921 gcgaggcgct tcccatcacg ttattatttt tcaacctgct gaacgtcaat tcgacgcgct
    10981 tcgtccagct gactggcttt cgcacgaatg cgtgcttcca gctggtcgat catatcgttg
    11041 ttgtccagac ggtctttgcg cacgccatct tcatagaggc cgcttttctt gttgccgccg
    11101 gtgacgccga gtgtagaaac cagcgcctca cctgggccat tcaccacgca gccgataatc
    11161 gaaacgtcca tcggagtgat gatatcttcc aggcgttgct ccagcgcgtt aaccgtaccg
    11221 ataacatcaa attcctgacg cgaacaggtc gggcaggcga tgaagttgat cccgcgcgaa
    11281 cggatacgca gcgatttcaa aatatcgaaa ccgactttga tctcttcgac cggatcggcc
    11341 gccagtgata cgcgcagcgt gtcgccgatg ccttcagaca gcagcagacc taaaccaatg
    11401 gcggatttta ctgccccgct gcgtgcacca ccggcttcgg tgatccccag atgcagcggc
    11461 tgatcgatct gttttgccag caaacgataa gactcaacag cgaggaagac gtcagacgct
    11521 ttcacgctga ctttgaactg atcgaagttc aggcgatcga gatgatcaac atggcgcatg
    11581 gcggattcca gcaacgcctg cggcgtcggt tcgccatact tttcttgcag atctttttcc
    11641 agcgatccgg cgttaacgcc aatacggatc ggaatgtttt tatcgcgcgc acagtcaacc
    11701 accatgcgaa tacgctcttc attaccgata ttgccagggt taatacgcag acaatcgacg
    11761 ccgtattccg ctactttcag tgcaatgcga tagtcgaagt ggatgtcagc caccagcggc
    11821 acgttaacct gctgtttgat gagtttgaac gcttctgccg cgtccatcgt cggtacggag
    11881 acacggacga tatcagcgcc aacgcgttcc agcgccttga tttgattgac cgttgcttcg
    11941 acgtctgtcg tacgcgtatt ggtcatggac tgtacggcga tgggagcacc atcgccaatc
    12001 ggcacattcc caacgtaaat acgtgttgat tttctacgtt gaattggagc ctggttatgc
    12061 atgaaaaatc tcccgcgtta cccgtctgtt actgcgccgg tgattgttcg gcattgaggg
    12121 tcagacgcgc aacctggtta gttctgataa aacgactcag atcgacaggt ttcccttgat
    12181 actggatctg tactgcggct ggcgcaccaa ttttcagttt gtatggtgcc tggccggtta
    12241 agttcaaatt accgtcttta cgctgcatac cgctaaacaa ttttttaccg gtagcatcag
    12301 taacctccag ccagcaatcg gcagtaaagt tcatcaccag cgcattcgga tcagccgccg
    12361 gcgtagtcac gcctgcctga tcggttggca acggcgcagc gccatctggc gttgttgttg
    12421 ccgttggtgc cggggtcgcg gcggtatcaa catttgcctg cgaaggcgaa acaaccgcat
    12481 tctgttgcgg atcaacagct ggtgctggcg cagttacggc aggtgtttgc gtgttggttg
    12541 cggtagtatc cacagacgct ggcggcgtgg acgttgtagc cgggtctgta gttgtcgacg
    12601 tatttaacgg aacactctgc ccctgctcgc tattactgct cagttccgcc gaagattgat
    12661 cggccatagt ggtgatctct tcctgctgag ctttgtggtc ttgccaccac caggcaccgc
    12721 tcaggccgat aaccacaaac aacaccagcc aggtgaaggt catcagccag ccgtcacgtt
    12781 ttttgcggcg tttaccgagg gaaaaactct gcatcggcgc aactttcgca gcccgtagtg
    12841 gagcctgctt ttccagccct ggcagcagtt cttcttctgg aatatgtacc agacgcgcat
    12901 aagagcggat atatccgcgc aggaatgttg aagcaagatc ggcgggtgcc ttatcttctt
    12961 caatgtcgcg taccgtggaa accttcaggc aaagtcgctc ggcaacggcc tgctgactaa
    13021 gtcctagttg ttcgcgagca ttacgcaggc gagcgccggt agtaagtgct tcattttggt
    13081 cgtgcgtggc ttcagtattc attcgctgca ggtacgttta aatgagaatt gagatgccgg
    13141 tgaaccatca tgctcaccca caccgcgaaa catccgttaa gttaaccgtt atcatacagt
    13201 ataagaccgt ctgtgtgctc gtgacaaagc ccacattcac taaggctaac ttactgttgc
    13261 atcgttacat actgccttaa agtcagcaaa aacgcaccgt taatattgac cagacaattg
    13321 caacttaata cttcattcat aaaagattac gccacggtac ataaagtaac cgtggcgtaa
    13381 tggctatcag accgctttaa tgtcgatggc ttcaccctgc atccgtttac gcagggtacg
    13441 tttcgtacgg tcgataacat cgcccgccaa ctgaccacag gcagcatcga tatcatcacc
    13501 acgggtttta cgcacaatag tggtgaaacc gtagctcatc agcacttttg agaaacggtc
    13561 gatacggctg ttcgagctgc gtccatacgg cgcgcccggg aacgggttcc acgggatcag
    13621 gttgatctta cacggcgtat ctttcagcag ttccgccagt tggtgcgcgt gttcagtgcc
    13681 gtcgttaacg tggtcaagca tcacatactc aatagtgaca cggccctgat tggcgttgga
    13741 tttctccaga taacggcgca ccgcagcaag gaacgtttcg atattgtact ttttgttgat
    13801 cggcacaatt tcgtcacgaa tttcgtcgtt cggcgcgtgc agggaaattg ccagtgcaac
    13861 gtcgatcata tcgcccagtt tatccagcgc cggaactaca ccggaagtag aaagcgtgac
    13921 gcgacgttta gacaggccaa aaccgaaatc atcaagcatg atttccatcg ccggaacgac
    13981 gttgttcagg ttgagcagcg gctcgcccat gcccatcatc actacgttag tgattgggcg
    14041 ctgaccggtg acttttgctg cgccgacgat tttcgccgca cgccacacct ggccaataat
    14101 ttccgatacc cgcaggttgc ggttaaagcc ctgctgggcg gtggaacaga atttacactc
    14161 cagcgcacac cccacctgcg aagagacgca gagcgtggca cggtcgtctt ccgggatata
    14221 caccgtttcg acgcgctgat cgcctacggc gatcgcccat ttaatggtgc cgtcggatga
    14281 acgctgttct tcaaccactt ccggtgcgcg gatttccgcc acctctttca gtttgccgcg
    14341 caacactttg ttgatgtcgg tcatctcatc aaagttgtcg cagcaatagt gatacatcca
    14401 cttcatcacc tgatcggcgc ggaagggttt ttcacctaaa tctttaaaaa actcccgcat
    14461 ctgctgacgg ttgagatcca gcaggttgat ttttccatct ttcgtggtga cgttttcagg
    14521 tgtgactaat tgttcagaca tatgctattc cggcctcgtt attacacgtt atggcccctg
    14581 gagggttgaa aaaagaaacg ccccggtgag cggctgctcg tccgggggcg ctgcattgta
    14641 caaattctgg cgcacggatg ccacgtttgc acgcggcatt tacgaaatta ttaacgggtg
    14701 cgcgggcaca cttcgccttc gccaaagaaa taagcgattt cgcgagcggc agattcgacg
    14761 gaatcagaac cgtgggtacc gttttcggtc aggctgtcag cgtaatcagc gcgcagagta
    14821 ccagccagtg cgtttgccgg attggtcgcg cccagcagat cgcggtgacg ctgaacggcg
    14881 ttttcacctt ccagcacgga aaccacgatc gggccagagg tcatgaattc aaccagacca
    14941 tcaaagaacg gttttccatc gtgttcagca taaaagccac gtgcctgttc aacggtcagg
    15001 tgcagcattt tggtgccgac aattttgaac cctgcagctt caaagcgcgc aaagatatta
    15061 ccaatgacgt tttttgctac cgcgttcggt ttgatgatgg aaaaagtacg ttcaatagcc
    15121 atttttacct ctgtaaattg ttctgttgtt gtctgtacca gcgtacgaga tggcgcggat
    15181 tataatgagc aacagggccg ttgactattg atgaaggtaa cattttttta aaataaaatg
    15241 agttttagca acaatcagga gcaaaacaga ctattgcatg acaaatttca ctgtcgcgat
    15301 ttgccccaca tcatccatca ccagcaattg ataatcacct ttatccgtca aatgcagggt
    15361 cacgttgcgc ccgcgttcag ttaacggttc gccattcaga aaccaccagc gttcacctgc
    15421 ccctccactt gattgcaacg gcaaagtcgc ttccgttgcg cccggtaaac gtttaataat
    15481 cgcgccatcg cgaacgcctg tcagctgcag agggagcttg gcatcgtgac cgtatggcgg
    15541 gcaaattgtc gaggccggtg gtaagcgcac agcgcgacgt tctgatgcgg gcagccaggg
    15601 ttccagcggt agcggccaga catttatcat ttcttgtcgc gcttgcgggc aatcagcggc
    15661 aacacgtttg ccattttcat ccagccagat ggggaaacga atgccattaa tgccttcctg
    15721 ctccggcagt aatagagttg gcggctgact cccgtccagc agccaggttg ccaggcggcg
    15781 gcgacagtta ccgtcacctt ccggcaaaga ctgtccgccc ggccagcaga taacgccacg
    15841 agtgactgag ttcgggcgcg ggtcttccgg cagattcgca ctgcgcgaca gtaagatatt
    15901 attgacctga ttcaacaatg gtacggcact ggcaaagcca aactgaccaa caacgggcgt
    15961 gccgtccggt ctgccagtcc agatcccaat gacatagcga gcgttaaccc caatcgccca
    16021 ggcgtcacga tagccatagc tggtgcccgt tttccatgcc agtggggcga cgcgcggcaa
    16081 ggcactatcc ggcaagggtt tcgcttcatc agccataatc cggcgaatga tccacgccgc
    16141 ccccgacgac attaaaggcc gttcaagcag cggatcgtca ggctgtaagc gcaatttgcc
    16201 tgccttgccg tggcgagcaa acgcggtata cgctgccgcc atatcttcca gttttgcacc
    16261 agcgccgccg agaatgagtg aaagattcgg cgcagcaccg ttgggcaaat ataacggcaa
    16321 tccaacattg cgtaactttg ccgcaaaccg tttcggtcca taggcttcca gcacctgcac
    16381 agcaggtaag ttcagcgagc gcaccagcgc ctcgctcatg ctgatcgggc catgaaaacc
    16441 gctatcaaag ttacctggtc gataatcacc ggtgcgccgg gggacgtctt gcagcagtga
    16501 tgccgggtgg atcaagcctt catccagcgc cagaccataa acaaacggtt tgagcaccga
    16561 tcccggcgat cggatcgcat tgaccatatc aacatgacca aagcgtgaat catcgttgag
    16621 atcaaccgat cccacccagc cgcgaacacg catatcggta tgatcaacca cgatcatcgc
    16681 cagtgagctg cgcggtggca accgcccttt ccagttttgc gccagttctt ccagacgtcg
    16741 ttgaagaccg gcatccagcg tagtaacgat tttgtcgctt ttgcttttac cgagcatcat
    16801 gcgcgaaaac agcggtgcca gttgcggcat ttgtcggggt gccagccaga tgggttcttc
    16861 ccttgactct tttacctgct cacgggacca cacaccttgc acggccatcc gttcgagcac
    16921 tttattacgc gcggcttcgg cacgctccgg ccaacgatcc gggcgaagac ggctgggcgc
    16981 ttgcggcaaa accgccagca ttgccgcctc ggaatagctt aaattcgcag gcgactttcc
    17041 gagataagcc caacttgccg caccgatccc ctgcaacgta ccgccaaacg gagcgcggtt
    17101 aagatacaag gtcagaattt cacgcttaga cagatgccat tccagttgca acgcgcgcca
    17161 gagctggcga attttgccgc caaatgtttt ggggtgagga tcaagcagac gagcaacctg
    17221 catagtgagc gtgctgccac cggaaataac ccgtcccgaa gtgagatctt gccatgctgc
    17281 gcgcgccacc gagaatggat tcacccccgg atgcttccag aaccagcgat cttcataatt
    17341 gatcagcgct tcaaggtaac gtggagaaac atcttcgatt gttaccggat aacgccagat
    17401 gccgtcagca tcggcgaagc gccatagcgg cgtaccatcc tgcgccacga ccactcgtgc
    17461 gggattgact tcatgcagcg gtagaggcca gagtttatct gctccccacg ctgcaagaaa
    17521 aaggagaaat ggcgcagctg ccagcgttat ccagcagccg cgtttggtta acaagcgagg
    17581 catttacggt cggacaatca gcagatcttc agccgcgccg gtcgcccgcc attggggaac
    17641 atacattgat tccaccatcg gttgcggtac ctgatacgtt cccggcgtca ccgcccgcgc
    17701 cagatacacc agcgttaccg gttggtattc atcaacggca accgccgcca caaagcgatc
    17761 gtcacggaac tcaatgtgct taatgctcgc ctgctgcatc tggttcagta agttttgcac
    17821 ttcgccacca ctttgctcca ggctggcgct accgttcgcc agattctgat tttccagttc
    17881 cagacccgca ggcagcagat ccacgactaa cgcatccggc acgctgttac tggcttttac
    17941 ctgcaaccag accagcacca gatcgccgct acgtaacgag tccagcgatt tgctcttacc
    18001 atcagtacca agaatatgac gctcgatttg cagcacattg ttcgccggta aaggtgcgga
    18061 ttgcggataa ccgctggcat ccatacgcaa ccataacggc tgatcgccac tgtttctcac
    18121 ctgcaaggtg gcaagttgat cgctattcag attgctgttt agcgttttct cgcctgtcag
    18181 cggctcagct gagaaagagg tttgcgcctg ccatttaccc ggtaaatcct gaatcgtacg
    18241 ggcagccagg aacaacgcgt tactttcctg cgtcgatagc cagcgttcac caaacgcctg
    18301 ctgcgaaagt gtgttcagca aagtgtactg ctcatcgggt agcagtttat tttcttccag
    18361 caaggagagc attaacgcgt tgtcgcgcag tggactaccg taatcaccca gccatatccg
    18421 ctcatcacta tttctcggcg ttttcagcgc cagcacaatc gcttcttcac cacgcgttgc
    18481 atcacccatg gttttcagcg caacgccaag ttgcagcagc ggtaaaccag aagcggcatc
    18541 tgcacgatgc tcccagattt cacgcagcgc acccagcgga gccttttgtt gacgggccaa
    18601 caccagcgca gcgtaagact gtacggcgaa tttactggct ttgagattat ccgcgtacgg
    18661 gatcgacatc atgcccggat cttgtaaata gcgcagcaga cgctcattac cccggttaat
    18721 ggcgtctgtc ggcacgctgt aaccctgttc gcctgcgcgg accaggaaat ccatcacgta
    18781 agccgtcagc cagtactctt cgtcaccgtt tttatcccac agcgcaaagc cgccgttatc
    18841 acgttgcatt tgcagcaaac gggaaatgcc gatatcgacc gatgcacggc gtttctcatc
    18901 actgtcgcct ttgatgccca acgcctgcag ttgggctgcg ttggtataaa gtgacgggaa
    18961 caggccgctg gcggtttgct caagacagcc gtacggatac gcttttaact ctttgatata
    19021 acgtgcaatg ttcagcggtg gtttgccgct caacaacaat tgcccttcca gcgtaacagg
    19081 cgagaagttt tgcaatccat ccgccggaat cgcccatgtc tcaccaggct gtaacgccgt
    19141 accgtaatta accgtttgtg ccgggaacgc cggacggacg ccgattttcc actgcttctg
    19201 ctgatcggca acggtttcat ccggtaacgc taacccgcta atggtggcct gaatttctcc
    19261 atcgccataa cccggcaatg ctcgcaccgg gataaacagc gtagtacgca cacctggcgc
    19321 taattcaacg gctgcgggtg aatcgctgac cagttcaagc aaaccactgg cggtcagggc
    19381 aacgttcagt ttttgcggtt tatcggtaag attagtgata tccagcgtca gacgcgaggt
    19441 atcgccactc gccataaagc gcggcatgtt cagttcagca atcaccggtg cggcaactat
    19501 cactttgctt tcgttgctac cgaaatcatc tgccgtccag gcttgcgcca tgacgcgcaa
    19561 ttcaccgtta aaatcgccaa tcggcagtgt aaccgagcct tcgccctgtt cgttgagcgt
    19621 taccggcagc gcctgctgcg cgacaatatt gacgtgattg accggcggtt taccaccacg
    19681 tttcagctca tcaccatcgc caccgaaacg cagagctgcc agacgcccct gaccttcaat
    19741 aacctgaccg taaatatcgt aaatgtctgc gccatagcgt ttctgaccaa agaacgcctg
    19801 ccacggatct ggcgtgacgt agtcagtaat attcagcaca ccactatcaa cggcagacac
    19861 cagcacattc acctgtttag gcttctcgcc atttttagtg ctggctttaa ttttcacggt
    19921 taatggttga ttgggacgca tttttgctgg tgtttccagc gccagatcga ggcgacggtt
    19981 ttcatcgcca agcggcagat gcaacacacc aaccgcgcgt tttggcgtcg cggagcgaga
    20041 tttatcgcca ggacgtacca ccagcgtact taaatacaga tcatgacgat tccaggtttt
    20101 atcgaccgga atcgtcagat ccagcccttg agcccgaaca tcaatctctt gccaccacag
    20161 cggcccttca ctggactcga ccatcgcata acctttaccc gccgttggcg cggcgatatg
    20221 caacttaatg gtgtcgccag ggcgataact ggctttatcc agtttcagcg tgacacggtc
    20281 gggtcgcact gcgccgctac cgtcgctgtt gtcctgccag ctatagccag cccagaaacg
    20341 aacactactg accgcttcat tcggcgcttt gacttccaga cgataagcgc cccactctac
    20401 cggaaaactg accttgccgg tttcgtccgc tttcagatcc agagtttgtt cattttcgat
    20461 cagatctttt tgatcaaact gtgactgcca gccttcatct tctgaccagt tccagtagta
    20521 atcgcggcgt tcgcgaatca ggcgcacctg caagcccgac acggcttttt tcacgccttg
    20581 cgcatcgcta taaacgatgt caaaagcggc gttactgcct tcatcaacaa tgggctgttt
    20641 caccgtgctg tcagtacgat aatcgtaaac cgatttcgag gcgaactgcg gacggatccc
    20701 cggcaatgca tcggcaggcc agatagcctg ctcagcgcgg cgcgtcaccg ggcgaccgcc
    20761 cgattccagc aaactaccct ggaaaataac ctgtaatggg gaatgcgttt ccttccactg
    20821 gctttctgta gaaacttcgc cgcgcccttt atcatccagc gtcaactgaa cttcatccag
    20881 cgtgcgggaa agattttcgg cagctatatc gccgaattca aaaccaggta aggctgacac
    20941 agcttcacgc agtgggcgca ggaaaagttg cccttgcaaa gtattaccat tagcaggtgc
    21001 accatacagg tagtacccca ccacggagaa tttcacttca tctttcggcg ttagcggggt
    21061 tttctcaccg gtcagattca gcgccatgcg ctctggcata aaatcttcga cgtggaaatc
    21121 ccacatccga tactggttat cgcccgtgtt agcgcgaata tgccacatac cggttgccgc
    21181 attgctatcg agtggccagg taaagtggta gaggccattt tccggctgac taacgacgct
    21241 cctgagtacc tgcccatcgg gtttaatcac gtctaacttg atgggttgat tgggcaacgc
    21301 tttaccgtct gcatcacgca gcaaaccatt gaggattacc gtttcacccg ggcgataaag
    21361 atcgcgtggg ccaaacatga aaaactgttt gctatagcct ggcgcgccag caatgttaaa
    21421 ttctgctaag tccagcgccg gaagttttaa atcgagtagc gttgtctgac cgtctttacg
    21481 cgccaacagt aatgccgcgt ttttatcatt ttccagctgc acatgcccct gagcgtcact
    21541 ggttgcctga gtcagagtct gccctttctc atttaataaa gagacttcaa ttccttgctg
    21601 ggccgcgccg ttttccagac tttgggtaaa gatatccaga cgattgtgat aacggtgagc
    21661 tgaaacgccg atatcactta acgtaaacag cgtcgcggga ttactgtaat cgtaacgtcc
    21721 agcctgattc atcacagcca gatacacgcc cgcctgctga agcggtttga tatcgcccag
    21781 cggcagcaat aatttttcac gggtgttacg cgcaggattg agatcaaacc gtccggtgta
    21841 gaccagatcc gccatctgca gcagtttgtc tgactgccag ttcgccagcg aattgcggta
    21901 ttcccattgg ctaatgaatg ctggcagaga ttctggctta acgcggaaga agttaacatc
    21961 gacattatta acgttgagcg ccattaccgg cagcccttca acgactttac caggcagcag
    22021 cgaaccacgg ctggcaaaac cgacgctggg ttggatgtcg cgggtagtta tagttttttc
    22081 gtaatcttta ctgaaggttg cgttgttgag tgctttgacc tccttgccaa tagtaacgat
    22141 caaatcacgt ttcggttcga ggtggcgtaa acgtaactct ttaagattat ctgacagctc
    22201 ccaggcacca tccactttgc cgcttttttt atcgacgaca tgaataacgc gtgagaaatc
    22261 ctgatccggg tcgagaggga tggagaacgt cagcaccagc gtggctgcac catcaagttg
    22321 gacttcagag agatccagca atgtcagcac cttaccggca ctctgttggg ccagtttttg
    22381 tctctccggc acggagagtt ttgctgaact cgcgttttct gaagaggccg ctttagtaac
    22441 ttcagaaggc gcatcttttt tcaccgctgt tggcgcgtta tcgttgttgt cgcaccctgc
    22501 cagcgccagc attagcatgc aggcggctac gcgtaacttt ttcatttttc atccctgcca
    22561 caatggcccg ttagcaacgt cgaataatta ttatgcgtga gaatttacgt tatgtaattc
    22621 agtatcacgc ccatacaatc cgaattttag tgagaattgt ggctcagaca gccaaatcag
    22681 cctctttcgc ttgtcgcttt tcactaaaca tccgacaatt tagcctaacc ccggcaaaaa
    22741 tggagatgcc tatgtccacg acatggtttg taggagccga ctggctcgcc gaacatattg
    22801 atgacccgga aattcagatt atcgatgccc gcatggcgtc gcctggacag gaagatcgta
    22861 acgttgctca ggagtatctg aatggacata ttcccggcgc agtgtttttt gatatcgaag
    22921 cgctttctga tcacacttcc ccgcttccgc acatgctgcc gcgcccggaa acgttcgccg
    22981 tggcgatgcg tgaattaggc gttaaccagg ataagcacct gattgtctat gacgaaggta
    23041 atcttttctc agccccacga gcatggtgga tgctgcgcac ctttggtgta gagaaagtgt
    23101 cgattctggg gggtggactt gcaggctggc agcgcgatga tctgctgtta gaagaaggtg
    23161 cagtagagct gccggaagga gagtttaacg ccgcgtttaa tcctgaagcc gtggtgaaag
    23221 taaccgatgt attattggca agccatgaaa atacggcgca aattattgat gcccgcccgg
    23281 ctgcacgttt taacgcagaa gttgatgaac ctcgcccagg tttacgtcgc ggacatattc
    23341 ccggagcact gaatgttccg tggacggaac tggtgcgcga aggcgaacta aaaacgaccg
    23401 atgaactgga tgcgatattt tttggtcgcg gcgtcagcta cgacaaacca attatcgtca
    23461 gctgcggctc tggtgtaacg gcagccgtgg ttttgttagc actcgcgacg ctggatgtgc
    23521 caaacgtgaa actgtacgac ggcgcatgga gtgaatgggg cgcgcgggca gatttaccgg
    23581 ttgagccagt gaaataagta ttttacaggc aataaaaaac cgccgaattt ggcggttttt
    23641 tattgctggt ctggttcgcg gcctttccag caggttgtat taccgtagta atgcaagcgc
    23701 gtctcagcgg agacaatact cgccagtaac tctctttttg tcaagcaaaa gagagttatt
    23761 attgttctgt tagtgtatta tccactgcgg ccctttccgc cgtctcgcaa gcgggcgctg
    23821 gcttaaggaa aggatgttcc gcgaccgtta gagcaagcgc gtctcagcgc ttgctatcgc
    23881 ggcaatatcg ccagtggtgc tgtcgtgatg cggacttcgc atggaccgca caatgaagat
    23941 acggtgcttc tgtatcgtac ttattgtttc tggtgcgctg ttttcccaag taaataataa
    24001 ccggagtctc tccggcgaca atttactggt ggttaacaac cttcagagca gcaagtaagc
    24061 ccgaatgccg ccctttaggg cggcatattt tagattatcc ggttttgttt aaagtcacgc
    24121 aaaaaaccac cccagcgacg ttcatagaat ggcacaatat gttcggtaat aaagtggcta
    24181 attccttttt cccctttttt cacctgacaa atatcgattg gttcatcgcc aggtaatgta
    24241 tcggtcgcta cacttcccgt cgcctgaata atttcttcga tatcaccatc ggcttcaatg
    24301 ccaataagta aattaggctg tgcctcttcg ttctctttaa ttgaacaaat aaaagcacgc
    24361 ttcaccgact taatggtttt aaataaggtg gtgagtgaat caatcatttg tgctggcggc
    24421 tctgcgactt ccgataatat cagagattca ccgccttcca ggatttcctg gctgctcagc
    24481 ggatttccct cttcaccaat caacaaactg atttcacgcg gcataaattc tttaccggtc
    24541 ggcagtttgg cattaaggaa gagcgtttcg ccaagggtca tctcaaacaa tgtgcgaacg
    24601 ggcattacga caaatgcctg ttcgtcttca accgcctgtt gaagcgcttc taacgaggtg
    24661 aaaaaaggaa tgacgctggt gccgtcttct ttttcccagt gctgtaaatc aagcgcacta
    24721 tcttcaacca cagcctcgcc ctgcgccgcc gtaccaggca cccagacggt ggattccagt
    24781 agagtacgga aaaaggccgg gcggtgcgcc ggttcggttg ctgctttttc cagcaggtct
    24841 tcaagttcgt tttttgtttc ggacatatga accacaattc attcaacgtt cggggcgcaa
    24901 atgcctgatg cgctacgctt atcaggccta caagggattc gcaatttgtt gaatttgcag
    24961 aatttgtagg ccggataagg cgtttacgcc gcatccggca tattagttta cgccgttaac
    25021 agattagcta tcgtgcgcac accaagtccc gtagcgcccg cagaccactg ttcaaccggc
    25081 gctttacggt aagtcgccga gcagtcgata tgcagccagc cttgctgata gttctcaaca
    25141 aagtgcgaca ggaagcccgc cgccgtgctc gcgcctgccg gatacgccgc gcttccggta
    25201 ttgttcagtt cggcaaagtt agacggcagc tggctgcggt ggaattccgc cagcggcaga
    25261 cgccagaatg gttcgttctc ttgtgaggca ctcgccagca aacgaccggc aagcgcatcg
    25321 tcaaaactga acagcgcgtg ataatcatta cccagcgcag ttttcgccgc cccggtgagg
    25381 gtcgccgcat caatgatcat ttccggtttc tgcgcactgg catcaatcag accatcggca
    25441 agcaccagac gcccttcggc atcagtgttc atcacttcaa cttttttacc gttgcgatag
    25501 gtgatgatat cgcccagctt gaacgcattg ccgctaatca ggttatccgc acagcagagg
    25561 aacagcttca cgcgcttgtt cagtccgcgc gtaatggcaa atgccagcgc cccggtaacc
    25621 gttgccgcgc cgcccatgtc cgacttcatc gagtccataa acgcagtctg tttgatgctg
    25681 tagccgccgg agtcaaaagt gataccttta cctaccaggc acgcgtacac cggtgcttct
    25741 ttatcgccag ttgggttgta atccagcgcc agcaataccg gagaacgttc tgaaccgcgc
    25801 ccgacggtgt gcagccccat ataaccttgc tcacgcagat cttcgccttt ggtgatccga
    25861 taagtcacac gatcgcccgc gacgttgctg atcagatcaa cagcacgctg tgccagttgc
    25921 gatggtccca attcttctgc cggtgcgttg atggtgtcac gcacccagtc gatgatcatc
    25981 aggcggttat ccagttcctg gcgctgggca tcgtccagat ccggccactc cactttacgc
    26041 gtgcctttcg gggctttgta accttgccag aatgcccagc agcgatccgc atcccagcct
    26101 tcaccgctta actgaacatg cttgatgccc agaccgtcaa tcttgcgcgc cgcacgctgg
    26161 atcagcccca gatcgtctgc cccgttcaaa tgcagggtaa tgccgtcatt attaatgctg
    26221 taagttgctt tttctcccca gcgcgcgtcg gcaggttggg tagagagggt aatcttcatc
    26281 gcttctgtca ttttagttat ccttctttgt aaaagggccg ccagttggca gccccaggat
    26341 ttttccgcta aatgattcgc gttgcaggaa ggcggcaagt gagtgaagcc ccaggagcat
    26401 agataactat gtgactgggg tgaacgagcg cagccaacgc atctgcggcg tgaagcatga
    26461 cgcggaaatt attcggcctc gtccagccag actaacaaaa tcgcttcgag gattttctcg
    26521 ttggatgcct gcgggtcgtc gtcgaaatct tccagatcgc aaatccactg atgcatatcg
    26581 gtgaatcgaa ccgttttcgg atcaagatcg ggatacgcat cgtacagtgc ttcgccaatt
    26641 tcgcggctat cggtccattt aagtcccata ctaacctctg ttaatgctca cgcgcatggt
    26701 tgatagtgta acgcgggatt tcgaccacta aatcttcgtc ggtgacgcgc gcctggcagc
    26761 ttaaacggct ttccggctcc agtccccagg ctttgtccag catgtcgtct tcctgctctg
    26821 agctttccgg cagcgagtca aaaccttcac gaacgatgca gtggcaggtg gtgcaagcac
    26881 aggatttttc acaggcgtgt tcaatctcga taccgttacg cagagctgcg tcgagaatgg
    26941 tttcaccgct attagcttcc agaacagcgc catcagggca gagatcctga tgaggcaaaa
    27001 taacaatctt tggcatatta aacctcgtcc acggaatggc ctttcagcgc acgacgaacc
    27061 gactggtcca tgcggcgagc ggcgaaatcc tgggtttgtt tgtctacgtt tttaatcgct
    27121 tgttcgatgg cgtcaacgtc atcgccctgc gccacttcac tcaggtgagc ggcagcatcg
    27181 tcaatgacct gacgttctgc ggcgcttaac agcgcggcat cagcagccag cgcgccgtgc
    27241 agactttcca gcacacgcgc cgcttctact ttttgttctg ccagcattcg ggcttttacg
    27301 tcctgctcgg catagctcat tgagtctttg atcatcgaag cgatttcgct atcggtcaga
    27361 ccgtaagacg gtttgacctg aatagacgcc tcaacgccgg tggatttctc catcgccgtc
    27421 acgctcaaaa gaccgtcggc atcgacctgg aacgtcacgc gaatatgcgc accaccagcc
    27481 ggtagcgccg gaataccacg cagcgcaaaa cgcgccagtg agcggcagtc ctgcaccagt
    27541 tcgcgctcac cctgcattac atggatagac atcgccgtct gaccatcttt aaaggtggtg
    27601 aaatcctgag cgcgggccac cggaatagtg gtattacgcg gaatcacttt ctccaccagg
    27661 ccgcccatcg tttcgaggcc cagcgacagt gggatcacat caagcagcag catttcgctg
    27721 tctggcttgt tacccaccag aatatccgcc tgaatcgccg cgccaatagc gacgacttta
    27781 tccgggtcga tggaagtcag cggtggacga ccgaaaaatt cgcctacccg ttcacgcacc
    27841 agcggcacgc gagtagaacc gcccaccatc accacttcca gcacttcatc agcttctaca
    27901 cccgcgtctt tcagcgcgcg acgacaagcc agtaaggttc gttttaccag tggcgcgatc
    27961 agttcattga attgttcacg gctgatttcg ccctgccagc ccgcaacgtt aacggtcacg
    28021 gagtccgcat cgctcagcgc gattttggct gcaatggcgg catccagcag ttcacgctga
    28081 acgcggttat cgctacgatc aggaatgccc gcctgctcgc gaatgtaatc cgccagcaga
    28141 tggtcgaaat catcgccgcc gagcgcggaa tcaccgccgg ttgccagcac ttcaaacacg
    28201 ccgcgactta agcgcagaat ggaaatatca aacgtcccgc caccgaggtc ataaacagcg
    28261 atcacgcctt cctgaccgga atccagcccg taggcgatag ccgcagcggt cggttcgtta
    28321 agtaagcgca ggacgtgaag gcccgccaga cgcgccgcgt ctttggtgcc ctgacgctgg
    28381 gcatcgtcaa agtacgccgg aacggtgata actacaccat ccagctcgcc tgccagggct
    28441 tcagttgccc gcgccgccag tgctttgagg atgtccgcag aaacgcgcac cgggttcagc
    28501 agccccgccg ccgtttcaat catcggcagg ccgttttcgc tggcctggaa ttgataaggc
    28561 aaatgcggat agcgttgctg gatatcagcc agcgagcgcc ccatcaggcg tttaacagaa
    28621 ctaatggtgt tggcggtatc aagcgctgcg ttagtacgcg cgtcataacc caccgaatgc
    28681 ccttgctgtt gatagtgaac aacagatggc agcaggtgac ggccttcatg gtcggctaac
    28741 gtttcggcct gaccgctgcg cactgtcgcc accagcgagt tggttgtgcc caggtcaata
    28801 ccagccgcca gacgacgctg atgcggcgca gcactcaaac caggttcact aatttgtaat
    28861 aaggccatgt ttagcttcca gaaattaaaa atcgagcagt ttttcttcga gttgttcggc
    28921 actgctccgc agtttatcga gaaaacgcag cttacgcacg gtatccgccg ccgcgtccca
    28981 cgcctcgttg tctaactgtt caaccatcaa ctgatggcgg gtatcaaaca tctttttcac
    29041 acgtttgata aagctttcca gccgcgcttc atctttcgcc tgttcgatct cgtccagctc
    29101 ttcgcgcagc tccaactgtt ccatcaggaa cgcggtgtcg cgcacagtat gctgctcgct
    29161 ggcgagatca aaaccgtgta aagaaagcaa atattccgcg cgcattaacg gatgacgcag
    29221 cgtttgccag gcctggttaa tggttgcaga ttgctgtacg gcggcgagtt gttccgcctg
    29281 gcttccgctg gcgaatttat caggatgata ctgacgttgt agatcctgaa aacgcaggct
    29341 cagcgcctgg gtatcgagtt gataacgggc aggcaagcca aagagggtga agtaatccat
    29401 aacattctca gggctgcgat ccgccgcgat aacggcgaat caggtaaaac aaaccccacg
    29461 cgcaggcgac cacggtgggg ttatcggtat gcgcatcaaa cgtggaagct ttcgccgcaa
    29521 ccacactcat ctttgacgtt cgggttggtg aatttaaacc cttcgttcag gccttctttt
    29581 acgaagtcca gctgcgtacc gtccagaaat tgcaggcttt tgccatcgac cacgactttc
    29641 acgcctttgt cttcaaacac gatgtcttcc ggcgtcggtt cgtcaacaaa ttccagtaca
    29701 taagccatac ctgaacatcc ggaggttctc acgcccagac gcaggccaaa ccctttgccg
    29761 cggttagcca gaaaggtatt tactcgcgct gctgcactgt cgctcagtgt aatcgacata
    29821 accaaacctc aactcttatt ttgcttcacg tttgctttta tagtccgcaa tggcggcttt
    29881 gatcgcgtct tctgccagaa tagaacagtg aattttcacc ggcggcagtt caagttcttc
    29941 agcaatatcg gtgtttttga tcgcctgcgc ttcgtcgaga gacttccctt tcacccattc
    30001 ggtgaccagg gagctggaag cgatagcaga accgcagccg taagttttaa aacgcgcgtc
    30061 ttcaatgata ccttcatcgt tgactttaat ctgcaacttc atcacgtcgc cacaggccgg
    30121 tgcccccacc atgccgctgc cgacgttctc gtcgttgttg tcaaaggaac ccacgttacg
    30181 cggattctcg taatggtcga taactttttc gctgtaagcc attataaatt ctcctgattc
    30241 cgataccgat taatgatgag cccattcgat gctgttcaga tccacgccct gcttgtacat
    30301 ttcccacagc ggagaaaggt cacgcagacg accgatggat ttacgaacta actcgatggt
    30361 gtagtcgatc tcttcttcag tagtaaaacg acctaaagag aaacggatag agctatgtgc
    30421 cagctcgtcg ttcagcccca gcgcgcgcag cacgtaggac ggttcgaggc ttgctgacgt
    30481 acaggcggaa cctgaagaaa ctgcgaggtc tttcagcgcc ataatcagcg actcaccttc
    30541 aacgtagttg aagctgacgt tgagaatgtt cggcgcaccg tgttccaggt caccgttcag
    30601 gtaaacttct tcgatatctt tgatgccgtt ccacagacgg ttacgcaggc cgcgcagacg
    30661 ttccatctcg gtcgccatct cttcttttgc gatgcgatag gcctcgccca ttcctacgat
    30721 ctggtgaaca ggcagagtgc cggaacgcat accgcgctcg tgaccgccgc cgtgcatttg
    30781 cgcttcgatg cgtacgcgcg gtttacgacg tacatacagc gcaccgatac ctttcgggcc
    30841 atagattttg tgaccggaga aagacatcag gtcaactttc aactggctca ggtcgatagg
    30901 cagtttgccc acgctctggg ttgcatcaac gtgatagata atgccacgag cacggcacat
    30961 ttcgccgata gccgcgatat cctgcaccac gccgatttcg ttatttacgt gcatgatgga
    31021 aacaaggatg gtgtcgtcac gcatcgctgc ttcaagttct ttcaggtcga taatgccgtt
    31081 acgctgcggt gccagatagg tgacttcaaa accttcgcgc tccagctgac ggcaggtatc
    31141 cagtaccgct ttgtgttcgg ttttgctggt gatgatgtgc ttgccttttt tctgataaaa
    31201 gttggctgca cctttgatcg ccaggttgtc agattcggtt gcaccagagg taaagacgat
    31261 ttcacgcgga tcagcgccga ccagatcggc aatctgatta cgggcgatat ctaccgcttc
    31321 ttcagcctgc cagccgaaac ggtgagaacg agaggccggg ttaccaaagg ttccgtccat
    31381 cgtcatgaac tgcatcattt tctcggcaac acgcgggtcc accggcgtgg ttgcggagta
    31441 gtcgagataa atcggtaatt tcattgctct ataaactccg tacatcactc aatgcaagga
    31501 accaggctac cggctggatg tacgaccgtg tttacggagc gcgatacgcc ccggcctgat
    31561 tctgaattct ttttattaag cgcgtaactt aacgtcgatc gcgtcttgta tgcgggtgcg
    31621 tggcgcgtcg tgagtatgct gacgaccaga cacatccagc acttcctggt tattaaccag
    31681 ttcgcctaaa gtaatgttgt tgagaaaacc ggtgagacgg tcgctcaaat cacgccacag
    31741 cgcgtgggtc aggcatttat cgccgccctg gcagccgcct ttaccctgac aacgggtggc
    31801 atctacagat tcgtcaacgg cgctaattac ttcgccaacg gcgatgctgc tggcatcttt
    31861 gcctaacaga taaccaccgc ctggtccacg tacgctggaa accagaccat ttttacgcag
    31921 acgggaaaac agttgttcca gataagaaag ggaaattccc tgacgttcgg aaatatcagc
    31981 caacggtacc gggcccgctt cagagttgag cgcaacgtca agcattgcgg tcacggcata
    32041 gcgcccttta gatgtcagtc tcatgtctta cttcacctca aactcgcccc tgcccggggt
    32101 tttttattgt aaaagtgggg gtattgcata gcagggtcaa gtctgacatt cccgagtaaa
    32161 ttggtcaact atttacttga ctgatttagt cgggtattta accttcagtg ccattttttt
    32221 atcgtggcgt ttgtacctgt tgtccttcca gaccatgggc gggttgaggg caattattcg
    32281 cattagcgct ggcctcttcc cctcacccta accctctccc cgaaggggcg aggggaccgt
    32341 ccgtgcattt atctggctta gccctcaggc cttattacct ttattctgct gctcaataga
    32401 agccagaatc ccgcgcagga tattcaattc ctggctttcc gggcgcgcac gggtaaacag
    32461 acggcgcaat ttattcatca cctgccccgg atggttttca cggataaaac cggttgccag
    32521 cagcgtttgt tccagatgac cataaaaacg ctccagatca tcgaccagcg gatacggcgt
    32581 ctcttcatgc tcgacctgct cgccgttttc ctgagttgcc agccaggcca tgcgcacttc
    32641 ataggcaata acctgaaccg ccatcgccag gttcagcgag ctgtattccg ggttagccgc
    32701 aatcgcgaca tgataatggc atttctgcaa ctcttcattg gtcaagccga cgcgctcacg
    32761 accaaacacc agcgccacag gggtatttgc cgcttcagcg acgcttttca ggccgcattc
    32821 gcgcgggtcg agcatcggcc atggcagcgt gcgggagcgt gcgctggtgc ccaccaccag
    32881 gctacaaccg gctaacgctt cgtcgagcgt atcgacgatg tgagcattac caatcacatc
    32941 gctggcccct gctgccaggg caatcgcctg ggagtcgggt ttcaccagtg gattaaccag
    33001 ccacagattg gttaatccca ttgttttcat ggcacgggca acagaaccca tattgccggt
    33061 gtgtgacgtc tccaccagca caattcgaat attttgcagc attgtctttc ttcatctaaa
    33121 gattattcac gcatcttatc ataaaacgaa gacagatgcc gatctcgctg ctatactctg
    33181 cgccgttttc ccgttcttta acatccagtg agagagaccg atgcatccga tgctgaacat
    33241 cgccgtgcgc gcagcgcgca aggcgggtaa tttaattgcc aaaaactatg aaaccccgga
    33301 cgctgtagaa gcgagccaga aaggcagtaa cgatttcgtg accaacgtag ataaagctgc
    33361 cgaagcggtg attatcgaca cgattcgtaa atcttaccca cagcacacca tcatcaccga
    33421 agaaagcggt gaacttgaag gtactgatca ggatgttcaa tgggttatcg atccactgga
    33481 tggtactacc aactttatca aacgtctgcc gcacttcgcg gtatctatcg ccgttcgtat
    33541 caaaggccgc accgaagttg ctgtggtata cgatcctatg cgtaacgaac tgttcaccgc
    33601 cactcgcggt cagggcgcac agctgaacgg ctaccgtctg cgcggtagca ccgctcgcga
    33661 tctcgacggt accattctgg cgaccggctt cccgttcaaa gcaaaacagt acgccactac
    33721 ctacatcaac atcgtcggca aactgttcaa cgaatgtgca gacttccgtc gtaccggttc
    33781 tgcggcgctg gatctggctt acgtcgctgc gggtcgtgtt gacggtttct ttgaaatcgg
    33841 tctgcgtccg tgggatttcg cggcaggcga gctgctggtt cgtgaagcgg gcggcatcgt
    33901 cagcgacttc accggtggtc ataactatat gctgaccggt aacatcgttg ctggtaaccc
    33961 acgtgttgtg aaagccatgc tggcgaacat gcgtgacgag ttaagcgacg ctctgaagcg
    34021 ttaatgactc aggcgggtga tgtcactcac ccgccctcgc ctttcaggcg ctattctgaa
    34081 atacttcctc accgctttac tttctttcgt cactctccca ccatctttcc ccgattaatg
    34141 gatgataaag aagtcgcaag gaaaggttat ggcactgcca gtgaacaaac gcgttcccaa
    34201 aattctgttt attctctttg ttgttgcctt ctgcgtttat ttagtgccgc gcgttgccat
    34261 caacttcttc tattatcctg acgataaaat ttacggtccc gacccctggt cggcggaatc
    34321 cgtcgaattt acggctaagg acggtactcg tctgcaaggc tggtttattc cttcttcgac
    34381 gggccctgct gacaacgcca tcgcaaccat cattcatgct cacggcaatg ccggaaatat
    34441 gtccgcccac tggccgctgg tcagttggtt acctgagcgt aatttcaacg tttttatgtt
    34501 tgattatcgc gggtttggta aatcaaaagg cacgccgtcc caagccggat tgctggacga
    34561 tacgcaaagt gccatcaatg tggtgcgcca tcgcagtgat gtaaacccac aacgtctggt
    34621 gctgttcggg cagagtattg gcggggcgaa tattctggat gttattggtc ggggtgatcg
    34681 tgaaggcata cgtgcggtga tcctcgactc cacatttgcc tcttatgcaa ccatcgccaa
    34741 ccagatgatc cccggcagtg gctacttact tgatgagagt tacagcggcg aaaattatat
    34801 cgccagcgtc agcccgatcc cgcttttact cattcacggt aaagctgatc acgttatccc
    34861 atggcagcac agcgaaaagt tgtatagcct ggcaaaagag ccaaaacggt tgatcctaat
    34921 cccggatggc gaacacattg atgctttttc cgatcgtcac ggcgatgttt atcgcgaaca
    34981 gatggtggac tttatcctta gcgcgttgaa tccacagaac taacccatga tcgctagcac
    35041 gataatcatt cacaaaacca ccttaagaca tgctaatcca ctggtcagaa cagtttaaga
    35101 tgagaaaaat tctgtgacgc ttgccaacat ttctgatgat tagcattccc ttcgccattt
    35161 ccctgagcaa actttagcta ttcttatcaa ttatgcttat gggagatcta cagatgatgc
    35221 ctacgcttgc tccaccatct gtcctttcgg ctccccagcg ccgctgccag atcttgctga
    35281 cgctctttca gccggggttg accgccacca cggcaacttt cagcgagctt aatggtgtgg
    35341 atgatgatat tgccagtctt gatatcagcg aaacaggaca ggagatcctg cgctatcatc
    35401 aactcacact gacggctggt tatgacggta gctaccgggt tgaaggtaca gtgcttaacc
    35461 aacgtttgtg tttatttcac tggctacgac gtggtttccg tctgtgtcca tcatttatta
    35521 ccagccattt cacccccgcc ctgaagagtg aactgaagcg gcgcggaatt gcgcgtaact
    35581 tttacgacga taccaatcta caagcgttag tgaatctctg ctcccgacga ctgcaaaaac
    35641 gctttgaaac gcgcgatatt catttcctgt gtctgtatct gcaatattgt ttgctgcaac
    35701 accacgctgg aattacgcct cagtttaatc cgctccaacg tcgctgggcg gaatcctgcc
    35761 ttgaatttca ggtagcgcag gaaattggac gccactggca gcgtcgggcg ctccagcctg
    35821 taccgcctga tgagccactg tttatggcat tacttttttc catgttgcgg gttcccgatc
    35881 cattgcgtga tgcgcatcag cgagacagac aattgcgtca gtctatcaaa cgtctggtaa
    35941 accattttcg tgagctggga aatgttcgtt tttatgatga acaggggtta tgcgatcagc
    36001 tttataccca cctcgcccag gcgttaaatc gcagtttttt tgccatcggt attgataata
    36061 ccctgccgga agagttcgcc agactgtacc cacgcctggt gcgcaccacc cgcgcggcgc
    36121 tggccggatt tgaaagtgaa tacggcgtcc atctttctga tgaggaaagt ggtctggtcg
    36181 cggtgatttt cggtgcctgg ctaatgcagg aaaacgatct gcatgaaaaa cagattattc
    36241 tactgaccgg gaatgatagc gagcgagaag cgcagattga gcagcagtta cgcgaactaa
    36301 cgttactgcc gctcaacatt aagcatatgt cggtaaaggc atttttgcag acaggcgctc
    36361 cgcgtggcgc ggcactgatt attgcgcctt ataccatgcc attaccgctc ttttcaccac
    36421 cgctgatcta tacggacctg acgctgacaa cacatcaaca ggagcagatc cgcaaaatgc
    36481 tcgaatcagc atgagggaac aactttcggg cgcaaaaaca ttgccggcag cgccaccagc
    36541 gccattaccc agaacacgcc gtggcccaga tattgataca ggaaaccggc gaaaacggtc
    36601 atgatagcga tactgccgcc catcgcgacg gcagagtaaa ccgcctgtaa acggatgact
    36661 tcgctaccct ggcgagcagc aatataacgc atggcggcca ggtggcagac cgtgaaggtg
    36721 ccgcaatgca gaatttgcac cactatcaac cacggcaacg ccgtagttgc tcccataatg
    36781 ccccagcgca ctacgccgca aatcgccgag atcaacagca tatcgcgtgc actacaacgg
    36841 cggaaaagtt tattactcag cgcaaagata atgacttccg ccaccacgcc cagcgaccac
    36901 aaatacccca ccgccgaggc cgagtagcca gctgcctgcc agtaaatggc gctaaaaccg
    36961 taataggccg catgtgcccc ctgcaataaa caaacgcagg ccagaaagcg ccagttctgg
    37021 agaaccagcg ccaaccacgc tgaccaaccg gtgctctcct gctggcggct tgccccttgt
    37081 ggctgaatcg tcggacggat gagaaagccg agcagcatgg atgccacgcc caatgttaac
    37141 agcgcgagga tcacctgata atcaaacata gtgaccagtt tgcccgtcag cgccgagcca
    37201 atgacaaacg ccaccgagcc ccacagtcgc actttgccgt aatcaagcgg gaactgcttt
    37261 tgccacgtat tcgccagtgc atcggtcaac ggtaccagcg gtgagaaaaa gaggttaaag
    37321 ccaatcatca ccagcatcag ccacgctacg tgcgcccccg cccagaaggc gacagcaaag
    37381 agaagtgtca gcagtgccag cacgcgcaag gcggaaatca ggcgggaagg atcgctgacg
    37441 cggggagcga tgagcaaact cccgagaaaa cgggcaacca gacctgcccc caataacagg
    37501 ccgatggttt ctggcgttaa accaatccct ttaagccaga cgctccagaa aggtagaaaa
    37561 atgccgtaac taaaaaagta tgtgaaatag ccgagcgcca accagcgcgt ggattgcaaa
    37621 accatgagtc cctcccgtca ggaggcgtta gtctggggtt aatcgaatgt tggtgcaagt
    37681 tgaaaaataa gaatattcga gcctgcttcc cgatgtctgt aacgccagtt cacaagcact
    37741 aaaaaactgc gatccgcgac gcatgttgca aaaataatgc gtaattatgc cgttacgctt
    37801 gccaaacgtt cctgcacaat ggcgatgaaa tcgcgtaatg ccggcttcat ctcccctttc
    37861 ttccacgcca tcagtaaagc aatggaaggc acatttccgg caatgggacg aaaaacaacc
    37921 tgcccggtat taaaattatt catataaccg ggtatcaaag tgacgcccag ccccatgccc
    37981 accagattca tggtcaccag aatattcgtt gccacctgga cgatatttgg ctggctgttt
    38041 tcttgcgcaa accacgcttt aacgatcggc gcaagcgaac cggaatacgc cggatcggta
    38101 ctgacgaaat tcacgccatc cagttgcgcg gcggtgatct ctttttcatg tgctaaaggg
    38161 tgatcaaccg gtaacaccac cactaatggt tcgtcaaaaa gctccagata atcaatctcc
    38221 gggctataaa caggatggcg cattaagccg acgtcgagtt caccacggcg aattttttcc
    38281 tcctgttgcg tggtgattaa actcaccagc tcaatcaagg tgtctggctg tctgagacga
    38341 aacatcggta atacttttgg cagtaaattc acttccgccg atggcacaaa gccaatggtt
    38401 aattgtctgt cttcctgaac aattttccgc gcccgtaatt tggcattttc cgcttgttcg
    38461 aggattgcca gcgcgtcctg gagaaaacat tctcccgccg ctgtcaacgc gactttgcgc
    38521 ttatccctca ccagtaacgg aacaccgaca cagttttcaa gatcgcggat ctggctgctt
    38581 aacgaaggct gtgaggtatg cagtttttcc gccgcacggg taaagttcag tgcctgcgcc
    38641 actgcgacga aatagcgtaa atgccgtagt tccatcacct tccccttgtt atcgaaaaaa
    38701 cgtctcagct ggtagaaatt aactatttca catattagca accaaccagc aacatcctta
    38761 tggcacaaaa atagaaggtc aatacatctt atctttcagg attaaaaaat atgaccacac
    38821 cctcagattt gaacatttac caactgattg acacccaaaa tggtcgggtc actccgcgta
    38881 tttataccga cccggatatt taccaactgg agcttgagcg tattttcggt cgttgctggc
    38941 tatttctcgc ccacgaaagc cagatcccaa aacccggtga tttctttaac acctacatgg
    39001 gagaagatgc ggttgtcgta gtgcgtcaga aagacggcag catcaaggcg tttctcaacc
    39061 aatgccgcca ccgggccatg cgtgtgagtt atgcagattg cggcaacact cgcgccttta
    39121 cctgcccgta tcacggctgg tcttatggca ttaacggcga gttgatcgat gtaccgctgg
    39181 aacctcgcac ctacccacaa gggttgtgta aatcccactg gggactaaac gaagttcctt
    39241 gtgtggagag ttataaaggg ctgatttttg gcaactggga taccagcgca ccgggcctgc
    39301 gtgattacct gggtgacatt gcctggtatc tggatggcat gctggatcgt cgcgaaggcg
    39361 gcaccgaaat tgtcggcggc gtacaaaagt gggtgatcaa ctgtaactgg aaattcccgg
    39421 cagagcagtt cgccagtgac cagtatcatg ctctgttcag ccatgcttct gccgttcagg
    39481 tattaggggc gaaagatgat ggcagcgata agcgcctcgg tgatggacaa accgcccgcc
    39541 cggtgtggga aaccgccaaa gatgcgctgc aatttggtca ggacggtcac ggtagcggtt
    39601 tcttctttac tgaaaaaccg gatgctaatg tctgggtcga tggcgcagtt tcaagctatt
    39661 accgcgaaac ctatgccgaa gcagaacaac gtttaggtga agttcgcgcc ctgcgcctgg
    39721 cgggtcataa caatatattc cccacgcttt catggctaaa cggcactgcc acactccgcg
    39781 tctggcatcc gcgcggccct gatcaagttg aagtgtgggc gttctgtatt actgacaaag
    39841 ccgcctccga tgaagttaaa gccgcttttg aaaacagcgc cactcgtgct tttggtcctg
    39901 ctggttttct cgagcaggat gactcggaga actggtgtga aatccagaaa ttgcttaaag
    39961 gccaccgcgc ccgcaacagc aaactgtgtc tggaaatggg gcttggtcag gaaaagcgcc
    40021 gcgacgacgg cattcctggc attactaact atatcttttc agaaactgcc gctcgtggaa
    40081 tgtaccaacg ctgggccgat cttctgagta gcgaaagctg gcaggaagtg ctcgataaaa
    40141 ccgccgctta ccagcaggag gtgatgaaat gagtgcgcaa gtttcactag agttacatca
    40201 ccgcattagc cagtttctct ttcacgaagc cagcttactg gacgactgga aatttcgtga
    40261 ctggctggcg cagctcgacg aagagattcg ttacaccatg cgcaccacag ttaacgcgca
    40321 aacacgcgac cgccgcaaag gcgtccagcc accgacaacc tggattttta atgacaccaa
    40381 agaccagctg gagcggcgaa tcgcccgtct ggaaacgggc atggcctggg cagaagagcc
    40441 gccgtcacgc acccgtcact taatcagcaa ctgccagata agcgaaaccg acatcccaaa
    40501 cgtatttgct gtgcgggtaa attatctgct ttatcgggca caaaaagagc gcgatgaaac
    40561 attctatgtt ggaacgcgtt tcgacaaagt tcgccgtctg gaagatgaca actggcgctt
    40621 gctggaacgg gatatcgtcc tggatcaagc ggtaatcact tcccataacc tgagtgtact
    40681 gttctgatga atcgaattta tgcgtgtccc gttgcggatg tgccggaggg tgaggctctc
    40741 cggatcgata cctcgcccgt catcgccctg ttcaacgttg gcggcgagtt ttatgccatt
    40801 aacgatcgtt gcagccatgg taatgcgtca atgtcagaag ggtatctgga agatgacgcc
    40861 acggtggagt gcccgctaca cgccgccagt ttttgcctga aaacggggaa agcgttatgc
    40921 ctgcccgcca ccgatccgct caccacttat ccagtacacg ttgaaggtgg tgacattttc
    40981 atcgacttac cggaggcgca gccatgagcg atctgcataa cgagtccatt tttattaccg
    41041 gcggcggatc gggattaggg ctggcgctgg tcgagcgatt tatcgaagaa ggcgcgcagg
    41101 ttgccacgct ggaactgtcg gcggcaaaag tcgccagtct gcgtcagcga tttggcgaac
    41161 atattctggc ggtggaaggt aacgtgacct gttatgccga ttatcaacgc gcggtcgatc
    41221 agatcctgac tcgttccggc aagctggatt gttttatcgg caatgcaggc atctgggatc
    41281 acaatgcctc actggttaat actcccgcag agacgctcga aaccggcttc cacgagctgt
    41341 ttaacgtcaa tgttctcggt tacctgctgg gcgcaaaagc ctgcgctccg gcgttaatct
    41401 ccagtgaagg cagcatgatt ttcacactgt caaatgccgc ctggtatcct ggcggcggtg
    41461 gcccgctgta caccgccagt aaacatgccg caaccggact tattcgccaa ctggcttatg
    41521 aactggcacc gaaagtgcgg gtgaatggcg tcggcccgtg tggtatggcc agcgacctgc
    41581 gcggcccaca ggcgctcggg caaagtgaaa cctcgataat gcagtctctg acgccggaga
    41641 aaattgccgc cattttaccg ctgcaatttt tcccgcaacc ggcggatttt acggggccgt
    41701 atgtgatgtt ggcatcgcgg cgcaataatc gcgcattaag cggtgtgatg atcaacgctg
    41761 atgcgggttt agcgattcgc ggcattcgcc acgtagcggc tgggctggat ctttaaggaa
    41821 gcacgatgaa agaaaaaacc atcattattg tcggtggcgg gcaagcggcg gcaatggctg
    41881 cggcctcgct acgccagcaa gggttcaccg gtgagctgca tctgttttcc gatgagcgac
    41941 atcttcctta tgaacgacct ccactctcga aatccatgtt gctggaagat tccccgcagt
    42001 tacagcaggt gttacccgct aactggtggc aggaaaacaa tgttcatctg cattccggtg
    42061 taaccatcaa aacgctgggt cgcgacacac gagagttagt gttaaccaac ggcgaaagct
    42121 ggcactggga tcagcttttt atagcaaccg gcgcggcagc tcgaccgctg ccgttgcttg
    42181 atgcactggg agaacgctgc tttaccctac gccatgccgg tgatgccgcc agactgcgag
    42241 aagttctgca gcccgaacgg tcagtcgtga ttgtcggtgc cggaactatt ggtctggaac
    42301 tggctgccag cgccacgcag cgcagatgta aggtgacagt gattgaactg gcggcaaccg
    42361 tcatgggccg taatgcacca ccgcccgtgc aacgctatct tttacagcgc caccagcagg
    42421 ctggtgtgcg cattctgctc aataatgcca ttgaacatgt ggtcgatggt gaaaaagtag
    42481 aactgacgct gcaaagtggg gaaacgcttc aggctgatgt ggtgatttac ggtattggta
    42541 tcagcgccaa cgagcaactg gctcgcgagg ccaaccttga tactgccaat ggcattgtca
    42601 ttgatgaggc ttgccgcacc tgcgatcccg cgatctttgc cggtggcgat gtggcaatca
    42661 ctcgtcttga taatggtgca ctacaccgct gcgaaagctg ggaaaacgcc aataaccagg
    42721 cgcaaattgc cgctgccgca atgttagggc taccgctacc gctactgccg ccgccgtggt
    42781 tctggagcga tcagtacagt gataacttac agtttattgg cgatatgcgt ggcgatgact
    42841 ggctttgtcg tggcaacccg gaaactcaga aggcgatttg gtttaatctg caaaacggcg
    42901 tgcttatcgg tgcggtcacg ctgaatcagg ggcgtgagat tcgcccaatt cgcaaatgga
    42961 tccagagcgg caaaacgttt gatgcgaaac tgctgataga tgagaacatc gcgcttaaat
    43021 cactgtaacc aggataatta gcgaatatct caatgcctgg ggcgtggcga ggtgcaagag
    43081 tgtgtattac gtttaaatca cattatcttg caaagggatt ggttatgaac acactacgtt
    43141 attttgattt tggagctgcc cgccccgttt tgttattaat tgcccgtatc gccgtggtct
    43201 taattttcat tatttttggt tttcccaaaa tgatgggctt tgacggtacg gtccaatata
    43261 tggcctcgtt gggcgcgcca atgccgatgc tggcagcgat tattgcggta gttatggaag
    43321 tgcccgccgc gatattaatc gtgcttggct ttttcacccg tccgctggcg gtgctgttta
    43381 ttttctacac gctgggtacg gcggtgattg gtcaccatta ctgggatatg accggcgatg
    43441 cggttgggcc aaatctgatt aatttctgga agaatgtcag tatcgctggc gcgttcttgc
    43501 tattggcaat taccgggccg ggggcaattt ctctcgatcg gcgttaggaa agatgccgga
    43561 tgcggcgtga acgccttatc cggcatttta taaattacag ccactctacc cgcaacgaca
    43621 tctctgaggt tgttgattcc cctggtgcta gcgcaatgag atcaccccct tccgggcgat
    43681 gatgatcatc cggcgcatgg ctcatcggtt ccagacagaa gaaatcaaac gcatatcctt
    43741 tatcaaacgc agggtcggaa acaaagatga aataacacgg tgcaggtggc gtcgtttcca
    43801 tgatgatggc ataaccttcc tgcggctgct cgatgcgggc ctgaccattc catccggcaa
    43861 aaccattgtt cacccactgg cgcggcaacg gcgcgagctg gttaaaatcc agttcctgcg
    43921 gtagctgctc gcaaaactca cccgccagcc actgctcccg ttccagccag taaccgctcg
    43981 cctgtgcctg aatccgcgtt tgcggcgaca acggaaaata aggatgccag ccggtaccaa
    44041 atggcagcgt ctctgcccct tgattggtga cagagagcgt caccgtcagc gtatccgccg
    44101 ttaaatgaaa cgcctgactt acccgatagt gatagacacc gctgcgatgt tcatacacca
    44161 gacacaaact atcatcgctg tgcgagacac attgccactc gcccagccag ccatcgccgt
    44221 gtagatagtg cgcatcccac tcaacattcg gttgcagttg atactcacgc ccctgccaga
    44281 caaaacgatt gccgctcacc cggtttgcaa atggcaccag cggaaaacat gaggcatcgg
    44341 ttgccacccc gcttttttta ccaggacgta agagcggagt cgtatcgcgc cagaagcctt
    44401 cgattacgcc gccctggtca gaaacgtcca gctttagcga cccgtgggat aaggtataga
    44461 tggtcatccg ctaactcctt aatccgggaa gttaatcaca actttcccgc atttgccgct
    44521 cgccatcagc gcataggcat cacctgcctg ttccagcgag aagcgatggg taatggcgtt
    44581 acgcggccac agtttccagt ccgttaaatc gtgggcgcat ttttccatat ggaacagact
    44641 ggtcacccag gagccaataa tccgccgttg atggtgcatc agatcggcgc tgacctcgaa
    44701 ttccactttt ccggtttcac caatgtaaac cacccgcccc cagtcagcag tggattgcag
    44761 tgccagcaag cgacctgcgg cattaccgga acaatcgagc gcaacatccg cgccaccgtg
    44821 ggtaagttca gcaattatct gcggcagacc ttcggtggtc gctaaatagc cgtgatccat
    44881 cacccctaac tgttttgcca tcgccagacg ttccggcagc atatcaacgc cgatgatccg
    44941 ttttgcaccg cgacctttcg ccagcatcat cgccatcatg ccgaccggcc ccagaccgac
    45001 caccagcacg ttatcgctgc cggaaacttc gccgcgcaaa atcccttcat aggctgtgcc
    45061 aacgccgcaa ctgataaacg caccatcttc gtagctcagc gcatccggca ggaggatcag
    45121 atctttttct tccgccagca gatattcggc atgaccgccg tcacgctgcc agccgtaagc
    45181 cgcttttcct ttgccagtac aagagatagg aaagccgcgg cggcagttcg ggcaaaaacc
    45241 acagccagaa atgtgataca ccagcacgcg atcaccctct ttaaaatggc gacagccttg
    45301 ccccatcgcc acaatctgcc cgcacggttc atgaccgttg ataaatccct ggtataacgg
    45361 tttatcgggt gccgccgccg tggcacggtg ttgatgatag atatagtgga catcgcttcc
    45421 gcaaatcccg gaggatttca ttttgatcag tacctggtta atccccggcg tcggcaccgc
    45481 aacttcccgc agatcgacgg ttgaatttcc tggtaaataa gctgccagca tcgttttcat
    45541 aaatccctca ttaacaatac gattaatttt catccctgcc gcacccgcgc caggggcgtt
    45601 aaggtttagc gtttcgcttt actgcttcgc tgggtcagca agatattcgc cagcaccgcc
    45661 accacgatga tgacgccgcg taccacctgc tggaaaaagg agttaatacc gagcagcacc
    45721 agaccgttac cgattagcgt aatcaccagc acaccaagca atgtaccgaa cagggaaccg
    45781 cgaccgccgg aaagtgccgt accgccgacc acgaccgcgg cgatgacgtc aaactccaga
    45841 ccgtttgcgg cacctgcgtt accggaaccg aggcgtgccg ccagcaaaat gccggtcacc
    45901 gccgctaata atcccgaaag ggtaaagata agaatgcgca ctcgacgaac gttaataccg
    45961 cacaactgcg ccgccgtggc attaccgcca acggcaaaaa ccgagcgccc gaaggcggtt
    46021 tttcggctaa tgaacacaaa cagcgcaaac aacaccatca tgatcagcgc ggatactggc
    46081 acaccgagaa attgtccgcc cagccagtcc agcacctcgt tttcgtcaat cggcactggc
    46141 agtgcgttgg tcataaacag ccccattccg cgcagggcgc tccacagccc cagtgtgtca
    46201 acgaaacttg gtacgttaaa cacgccgcgc agcaccccgg cgagcgttcc catcagcgcg
    46261 cctaacagca acaccagcag acaagcaatc gccaacggaa cttcaaattg cagcaaaaat
    46321 gccaggcaca ccgagacaaa agccaccatc ggcccaacgc tgacatcaat ttcaccggag
    46381 ataataatca gcgtcatcgc ccaggcggca atcccaatgg tggcggcatc gcgcagcacg
    46441 ttcatctggt tattcaatga gataaagcca ggcgcgttca gggagaagac cagataaaga
    46501 atggcaatca ccaccagcaa accgatctca ttaatatggc gactgacaaa ttgtttgagc
    46561 gagacgctct tgccctgcgg caatggtaat gacgaagcag acatcttcag gttcctcggt
    46621 aaaattcatc agtgcacaga cagaatggcg gacatcagct catccacatt gaccggcgag
    46681 tgaaactcct gcgagaacgt accgtgctgt aacaacagga tgcggtcgca caccagcggc
    46741 aactcctcca cttcactgga gataaacacc acgctttttc cttcggcagc cagctcacgg
    46801 acaatacggt aaatctgctg tttggcttcg atatcgacgc cgcgcgttgg ctcgtcgagc
    46861 aacaaaatct ggctggcggc atagacccaa cgaccgatca ccactttttg ctgattgccg
    46921 ccagaaagcg tgccgatggg cgtttcgcta ctggcggcct tgaccgtcat ccgctgcatc
    46981 acctcttcgg tcaggcggcg gatggtggac cattgcagta cgccgttggc gctgattttt
    47041 tgccgattgg tcagcactgt attttcgtca acgcccaacc agggaatgat ccccgcttct
    47101 ttgcggtttt ctggcgtata gccaatgccg cgtttcagca tgtcgccgta atcggggcgc
    47161 gtgattttct cgccgttgat aacaatttcg ccctgttcat actcctccag cccaacaatc
    47221 gccttcagca attcactgcg ccctgccccc agcaggccag caatgccaag cacttcgccg
    47281 cgacgtaacg taaagctgat atcctccagc ttgggcttat ggcgtaatgc acggacttcc
    47341 agcacggcct gatccacaat ttcctgaggg gctaccggcg caatatcaac gtgatcacgc
    47401 cctagcatta gcgacacaat atgatgcgtg gaggtgtttt cgagcatcac atcgcccgcc
    47461 acctgaccat cgcgcataac ggtggcacag gaggcaatgc ggcggatttc ttccatccgg
    47521 tggctgacat aaatcaccgc cacgcccagt gccgacatct ttttcaccgc actgatcacc
    47581 agttcaactt ctgcactggc aagcgagctg gtgggttcat caagaatgac cacgcgcggc
    47641 tcgcccttca tcacccgtgc aatttccacc agttgctttt gcgccgggct tagcgttgaa
    47701 acaagttgtt caggactaac gtcaacgccc agcgcctgta agcaacgttg ggcatcctgc
    47761 gccatttgca ggtaatcaat catgccgttg cggcgaggcc attgaccaag gcagaggttt
    47821 tctgccaccg tcagcccttc caccagactt aattcctgat aaaccgcacg aacccccagt
    47881 tcagcggcac ggcgagtcaa cgtagcttcg tcaccttcca gtcgcgtctc gccaatccag
    47941 atatcaccgc tatccgggcg ttcgctgccg gtaagcattc gaatgagagt cgatttgccc
    48001 gcgccgtttt tacctaacag cgcacgaact tcgcctttat tgagcgtgaa gttaacgtta
    48061 tccagcgcaa cgacgccggg gtaacgctta tttcctgcca ccacttttgc taccgggact
    48121 gcctctgttg ccgtgaacat agggacctct gcgaatcagc gattagggca gaccatcaac
    48181 gtgcgttgcc agccactgtt taccatcttc cgttttggta tagagatcga ttggcacctg
    48241 aatcactttt tcaccgtcgg cttgtttatt gataaccttc aatgtttgcg cgaaaacagc
    48301 attgcccatt ttcttaccgg aaatatccac taccgctttc agcacctgat tgttttccag
    48361 ctcctgagca atttcggttg tcatatccga accgaaaaca gcaatttttc cggcctgatt
    48421 ttgattacgt accgctttta ccgcgccgag tgtcgcaccg cccgactccc ccataatggc
    48481 gttgagatcc ggcgtggaga taatcagttt ttcaccaacg gaaatcgctt tatctaaaac
    48541 agtcccttcc tgattagcga caatttgcgc gccgggaacg cgggatttta atacttcttc
    48601 aaatccttta cgtcgctgca cacaaacttc aaaggcttcg caattgatga cggcaatttt
    48661 cggctggtca attttattgg caataaaata atcggcggca gcgttaccca gttttttacc
    48721 aaattccagt ggatcgccga ccagatacgc cgagacatat ttatcgacac ccttttgatt
    48781 aatacaggtg ttgtagcaaa tcaccggaat acccgcttca ctggcgcgac gaacggtacg
    48841 gctactgcca ttttcagaca ctgccgataa aataatggca tcgacattac gcgccacgag
    48901 ggtatcaaca aaggtacttt ctttcgaaat atcaccctgg gcgttagttt caattaactg
    48961 tacctgtact gaagaatctt ttgccgcatc ctgaacgccc tgacgcactc cagcgtaata
    49021 tccctgggta tcaaggtata ttgcaccaat ggtcatttct ttatccgcag tcctggcaaa
    49081 tagtgcgcta cctaatagcg tacccattaa taatagatta cgggttgttc tcattttttt
    49141 aggcatagtg cctcctgtag ggtttttatt aacaacggct tattctaatt attttgtgat
    49201 gagcggcagc gcgtgccgct caaatattac agttaatagg gtttagtgaa cgtagttaaa
    49261 aataaaaggc atcacggtgg tgaataatgc cgctttcggc caggccggat taatcgccgt
    49321 caattcagcg cgagcagatt catattgcgc aacctccccg agtcccgcgg acgccagcat
    49381 cgccaccatc aggcattttt ctttatgctg ctgttgtaaa tcgccataca gcgacaacag
    49441 gtcaggttgt gaaacagcaa agaaatccgc ctcaatactg gttttcgcca tctcttgcgc
    49501 ccactgtttc atttcactaa acagttgctg tgcggtttgc tgttcaccca gcagtcgcag
    49561 cgccattcct tgccagaaga gataatcaac cggctgatcg ttgtaataac tgtggatgtt
    49621 aatggtgcga tcgccggtcg ccgccagacg taaacaacgc atcgcttcag tttcatcgcc
    49681 ctgcgcgttg gcgcatatcg cctgccagaa ccagatgtcg ttatcagttt gccccggtaa
    49741 acggccttcg cttaaattct ccggataatg cagcgcggca tgaagcagtt cgctggcctg
    49801 ctgcggctct ctggcatcaa gatgctgcca ggcgcgtaat aactggttga ggataaactg
    49861 actggtgacc ttcccttccc cgccttccca cgggtggaat ttgcgcgtgg cgagaatgtc
    49921 cgccgctttg tctgcctgac ccgtgagatg ccacaaattg agcaactctg ctgtcatgtc
    49981 gtcgcgtttc agcgcaattt ccagattatt ttccagacgc gccagtcgtt tctccggtgt
    50041 ggctccgctt aacttatcaa gcaaatcccg ttcgaaaagc agacgtgcat cctgcggcgc
    50101 aagctgataa gcattatcaa gataacgcgc ggccagctca taatcgtgtt gcttattcca
    50161 cgcatggatc gctaacccgc gccagccgtc ggcaaactcc ggcgacatct ctacgcaacg
    50221 ttgccataag gtaatggctt tgttgtagct acgcttgttg tagtagaagc aggccagtaa
    50281 atgacgggca aaccagcact cttcaatact ctccagcgcc gccacttctt ccagcgtatt
    50341 cgggaaacgg acaaactgcg ggaagacatc aatggctttt gcgaccagtt cgccgcgttc
    50401 ggctttcggc aataaactcg cctgcaggta aagcggcagc gtgcgctggc agtccagtgc
    50461 gttcagcatc tctgccgcca gggtgggcat tccccagtta atcagttgcc cggcggtcat
    50521 cagagcgtta acgtcgcgtc cctgacacag accgcgccac tgcgcgagag ctgattcgct
    50581 acgaccatcg aaccagttca gccaccacag agtggcgttc agcggataat cgcgcagcag
    50641 tttctcgcgc tgcacacgcg cgttgtcctg acgaccactt aacaccagca gcagattatg
    50701 caggcaaagc acttcctgat tggttgggca ggcgcgaaga ctttgttggc aaaaatccag
    50761 accagcgtcg aagttaccat tacgcgccgc cagtcgtgcc aggccataat agccaccggc
    50821 tttgctgttg ccgctccaga ccgcacgcca gaaatcctct tcggcttgtt gatattgtcc
    50881 ctgacgttcg taagcactgg cgcgaatcaa actggcctgt ccgcactgcg gatttttgtt
    50941 cagcgcatgt gcgcgtttca gcgcctgagt ggcatacgcc accgcttgcg ggaaatcggc
    51001 gcggttatat tccagcatcg ccagcgccag gttacagcgg taatccagcg gatccagcac
    51061 cacgccgcgc aggtagtaat cgaacggtga acggctggcg tgatgatatt gctccagatg
    51121 ctgaccgata aaccaggctt catctgtact ggtaatgtct tgtgctgcca gtggcgcttt
    51181 ggcgacgtcc ggcaacggca actcttgcgg ctgatgttcc tgataactca gtacaatatt
    51241 gccgtcggca tcggagagct caatggtcag cctttcagga ttgataccgt gcaacacgcc
    51301 ctggatggcg gtcgcaggca tcagtgccac ggcatcatca agtaacgcgt tgcatttgcc
    51361 gatttcgcgg atcgccaggc ggtatccgtt caacggagag atggcataca gcccccactc
    51421 aatcccccgc ttactacgct ggagttttat caccgcatcg cgggaggcat tttgcaccat
    51481 gcccaaagaa tgataaggca ggaaatactg ctcaaaacgc ttctcttcgt aagcatcaag
    51541 ccaggtaaaa tcgggctggt tatcggcaaa aataccggtc atcagttcga tatacgggcc
    51601 gttattgtcg gtcagactct tatcccacgc ctggccaaat tcactgtgtc cccaactcca
    51661 ctgtttttta cctggcgcga tatggtggtt ggcaacgtgc agcaaaccgc catcttcatc
    51721 gtgacaccac gcgccgacaa aatcgtactg cgatttttcg gccatatatg aggttggaac
    51781 aggcacattt ttatagcgag aaatgtccac tccggcggag tagtccactt tgtagtaagt
    51841 gccggtggcg atggggaaag cggagacggc ccgtttgccg tgatcaaaca ccgcagtcac
    51901 atccggtggg aaaacgctct gatgcccttc cccccctttc actgccgggt tggcccacca
    51961 caagaaatga cgcggcgtgg cgttaccgtt atagacgcgg ctggcgattt ccagcgccgc
    52021 ccggtcaggg cgcagggtga aacctgtcat cacctgtaaa ccatgcatcg gctccgtttc
    52081 gcctacccac accgtctgtg caccgtcttc atgggcttcg agggtgaaat caacaggcat
    52141 aaaggtggtc gggcgatgat gttgcggcca gttaaactca atcccaccgg aaatccacgg
    52201 ccccagcagc cccaccagcg caggtttaat gacttcattg tgataaacaa aatcgcgctg
    52261 tttcacttta tcccacgcgc gatgcacccg accgcccagt tccggcagga tcatcacttt
    52321 gatgtagtcg ttttccagcc acaccgcctg ccaggatttc agggttttct gctcgctcag
    52381 cgtatcggtc acgccgtagg gataaaccgc gccggacgat ccctgataaa cgcgattttc
    52441 gaggaacatg ggatgtatat cctgcggccc ggtttcatag gtcgggatct caacgcgctc
    52501 ttgccacact tttactggag tcatggtgcc ctcaatatta acaagacata ctgaattaaa
    52561 agatttgtgg cagtgtattg aacaatctgg caatgttttc gcggaataat cacgcaatta
    52621 actaaacaag gtttagtgaa gatgagagcc tgcattaaca atcaacagat tcgccaccat
    52681 aacaaatgcg tgattctgga actgctgtac cggcaaaagc gcgccaataa atcaacgctg
    52741 gcccggctgg cgcaaatttc gattccggca gtcagtaata ttttgcagga actggaaagc
    52801 gaaaaacggg tggtgaatat tgacgatgaa agccagacgc gcgggcatag tagcggtaca
    52861 tggctgattg cgccggaagg tgactggacg ctgtgcctga acgtgacgcc caccagtatt
    52921 gagtgtcagg tggctaatgc ttgtttaagt ccgaaaggcg agtttgagta tttacagatt
    52981 gatgcaccga cgccgcaggc gctgctgtcc gaaatcgaaa aatgctggca tcgccaccgt
    53041 aaattgtggc cggaccgcac catcaatctg gcgctggcaa tccacggtca ggttgatcct
    53101 gtgaccggcg tgtcgcaaac catgccgcaa gcgccgtgga caacgccggt ggaggtgaaa
    53161 tatctgctgg aagagaagct cggcattcgg gtgatggtcg ataatgactg cgtgatgctg
    53221 gcgctggcgg agaaatggca aaataattcg caggaacggg atttctgcgt gatcaacgtt
    53281 gattacggca ttggctcgtc gttcgtgatt aacgagcaaa tttatcgcgg cagtttgtat
    53341 ggtagcggac agattggtca caccatcgtt aatccggatg gcgtcgtctg cgactgtgga
    53401 cgttatggct gcctggaaac cgtcgcctcg ttaagcgcat taaaaaaaca ggcgcgggta
    53461 tggctaaaat cacaaccggt tagtactcaa cttgatcctg aaaaactgac tacagcgcag
    53521 ttaatcgctg cctggcaaag tggagaaccg tggatcacca gctgggttga ccgcagtgcc
    53581 aatgccattg gtttgagtct gtataacttc ctcaacatcc tcaatattaa tcagatttgg
    53641 ttgtacggtc gcagttgtgc ctttggtgag aactggctta atactattat tcgccagaca
    53701 ggatttaacc cgttcgaccg cgacgaagga ccgagcgtga aagcgacgca aattggcttc
    53761 gggcaattaa gccgcgcaca acaggtgctg ggaattggct atttgtatgt tgaggcgcag
    53821 ttacggcaga tttgatggcg caataacgta gaaaggcttc ccgaaggaag ccttttttca
    53881 acagattaac cgtttcgctt atgcgtaaac cggataacgt gcgcagatgt cgagaacttt
    53941 acctttgatg cgctcgataa cagcttcatc attgatgctg tccagcacgt cacacatcca
    54001 gccagccagt tctttcgctt ctgcttcttt gaagccgcga cgcgtaattg ccggagtacc
    54061 cacgcgaata ccggaggtca caaacgggct cttcggatcg ttcggtacgc tgtttttgtt
    54121 gacggtgatg ttagcacggc ccagagcggc gtctgcttct ttaccggtca ggtttttatc
    54181 aaccagatca accaggaaca ggtggttatc agtgccgccg gaaaccactt tgtagccgcg
    54241 ttccaggaac acttctacca tcgctttagc gtttttagcg acctgctgct ggtaagtttt
    54301 gaactcaggc tccatcgctt ctttcagagc aaccgcttta ccagcgatta catgcatcaa
    54361 cggaccgccc tgaccaccag ggaaaacggc agagttcagt tttttgtaca gctcttcgct
    54421 accacctttc gccaggatca gaccgccgcg cggacccgcc agggttttgt gagtggtggt
    54481 agtaacaacg tgagcatgag gaaccgggtt cgggtagacg ccagcagcaa ccaggcccgc
    54541 aacgtgcgcc atatcaacga acaggtaagc accgatgctg tcagcgattt cacgcatttt
    54601 cgcccagtcc accacgccgg aatatgcaga gaaaccaccg ataatcattt tcggcttgtg
    54661 ttctttggct tgtttttcca gatcggcgta gtcgatatga ccggtagcat cgataccgta
    54721 aggaacgatg ttgtacagtt taccggagaa gttaaccgga gaaccgtgag tcaggtgacc
    54781 gccatgcgcc aggttcatac ccagaacggt atcacctggt tccagcagcg cggtgtagac
    54841 cgcaaagtta gcctgggagc cggagtgcgg ctggacgtta gcgtagtcag cgccgaacag
    54901 ttctttcgca cgatcgatcg ccagttgttc aacgatatca acatactcgc aaccgccgta
    54961 gtagcgtttg cccggataac cttcagcata tttgttggtc agctgagaac cctgcgcctg
    55021 cattacgcgc gggctggtgt agttttcgga ggcgatcagt tcgatgtgct cttcctgacg
    55081 tactttttcc tgctccatag cctgccacag ttcggcatca taatcggcaa tgttcatttc
    55141 acgctttaac atccgcatct cctgactcag ctaacaataa aatttttggc ctttataggc
    55201 ggtcctgttg gacaacggcg aacagtataa ccgaatcatt gtgcgataac aggtcttgac
    55261 aaaggaattt acgcaaacga ttaccttcag gctacgcaag gctttggaga ataaagagct
    55321 tgcaaccgga aacggatttc ttttcaggtt tgtgatgcaa atttttcact tcatcacatt
    55381 ctttctgaaa aacaccaaag aaccatttac attgcagggc tattttttat aagatgcatt
    55441 tgagatacat caattaagat gcaaaaaaag gaagaccata tgcttgacgc tcaaaccatc
    55501 gctacagtaa aagccaccat ccctttactg gtggaaacgg ggccaaagtt aaccgcccat
    55561 ttctacgacc gtatgtttac tcataaccca gaactcaaag aaatttttaa catgagtaac
    55621 cagcgtaatg gcgatcaacg tgaagcactg tttaacgcta ttgccgccta cgccagtaat
    55681 attgaaaacc tgcctgcgct gctgccagcg gtagaaaaaa tcgcgcagaa gcacaccagc
    55741 ttccagatca aaccggaaca gtacaacatc gtcggtgaac acctgttggc aacgctggac
    55801 gaaatgttca gcccggggca ggaagtgctg gacgcgtggg gtaaagccta tggtgtactg
    55861 gctaatgtat ttatcaatcg cgaggcggaa atctataacg aaaacgccag caaagccggt
    55921 ggttgggaag gtactcgcga tttccgcatt gtggctaaaa caccgcgcag cgcgcttatc
    55981 accagcttcg aactggagcc ggtcgacggt ggcgcagtgg cagaataccg tccggggcaa
    56041 tatctcggcg tctggctgaa gccggaaggt ttcccgcatc aggaaattcg tcagtactct
    56101 ttgactcgca aaccggatgg caaaggctat cgtattgcgg tgaaacgcga agagggtggg
    56161 caggtatcca actggttgca caatcacgcc aatgttggcg atgtcgtgaa actggtcgct
    56221 ccggcaggtg atttctttat ggctgtcgca gatgacacac cagtgacgtt aatctctgcc
    56281 ggtgttggtc aaacgccaat gctggcaatg ctcgacacgc tggcaaaagc aggccacaca
    56341 gcacaagtga actggttcca tgcggcagaa aatggcgatg ttcacgcctt tgccgatgaa
    56401 gttaaggaac tggggcagtc actgccgcgc tttaccgcgc acacctggta tcgtcagccg
    56461 agcgaagccg atcgcgctaa aggtcagttt gatagcgaag gtctgatgga tttgagcaaa
    56521 ctggaaggtg cgttcagcga tccgacaatg cagttctatc tctgcggccc ggttggcttc
    56581 atgcagttta ccgcgaaaca gttagtggat ctgggcgtga agcaggaaaa cattcattac
    56641 gaatgctttg gcccgcataa ggtgctgtaa tttgatgttg ccggatggaa acatccggca
    56701 acccttgacg cggtttaaat tgccgcgtcg tcctcttcac cggtacggat gcgaatgacc
    56761 cgtgccacgt caaagacgaa gattttaccg tcaccgattt tgccggtttg cgccgtgcga
    56821 ataatggtat cgacacaggt atcgacaatg tcgtccggta cgacaatctc aattttcact
    56881 ttcggcagaa aatccaccat atactccgcg ccgcggtaca gctcggtatg gcctttctgg
    56941 cgaccaaagc ctttcacttc ggtcaccgtc atgccggtaa taccgacttc ggccagtgct
    57001 tcgcggacat cgtccagctt gaagggtttt ataatcgcat caatcttttt catgctattc
    57061 cttgaaaagg tcgcctgtct tttgatctgc taaacgtaac acataacgcc aattcattcc
    57121 ttgaaatcgt ttgcatccag ctcgtgtcgg gaaagcagtt tataaaattc tgtccggttg
    57181 cgccccgcca ttctcgccgc gtgggtgacg ttgcctttgg taatttgcag cagcttacgc
    57241 aaatagttga gttcaaactg attacgtgcc tcaacaaagg ttggcagcgc cgtgttttca
    57301 ccctccagcg cctgctctac taatgcatcg ctaataaccg gagatgaggt cagcgccacg
    57361 cactgttcaa tcacgttgac caactggcgc acattacccg gccaactagc ggtcatcagg
    57421 cgtttcatcg catcagtgga gaacgcgcgg acaaacggtt tatgtcgctc tgccgcctgg
    57481 cgcaacaggt gatttgccag aagcggaatg tcttctgtgc gctctgccag agccggaatt
    57541 ttcaggctga caacgttgag gcggtaatag agatcttcac ggaattcccc gcgcgccatc
    57601 gcttttggca ggtcgcggtg agtggcggaa ataatccgca cgtcgatatc aatatcgcgg
    57661 ttgctgccca gcgggcgcac tttacgctcc tgcaacacgc gcagcagttt gacctgcaat
    57721 ggtgcgggca tatcgccaat ctcatcgaga aatagcgtac cgccttccgc cgcctggaat
    57781 aaaccttcgc gattgctgac agcgccagta aacgcgccac gcgcatgacc aaacagctcc
    57841 gactccagca actgctcggg caatgcgcca cagttaatag caataaatgg tttgctgttg
    57901 cgcgggctgg cgttgtggat agcctgggcg aaaatctctt tcccggtgcc gctctggcca
    57961 ttaatcaaca cgctgacgtc tgattgcgcc accagccgcg cctgttccag caaacgcagc
    58021 atcagcgggc tgcgggtgac aatcgcctcg cgccagcgtt cgtcggtggc tggcgcggat
    58081 tgttccagcg catcgtcaat tgcctgatat agcgcatctt tatcgacagg cttggtgagg
    58141 aaactgaaca cgccctgctg tgttgcagca acggcatcgg gaatagaacc atgcgcggta
    58201 agaataatta ctggcattcc cggctgcact ttctgaattt cagcaaacag ctgcataccg
    58261 tccatttcat ccatccgcag gtcgctgatg actaaatcta ctttttcgcg attcagtacc
    58321 cgtaatcctt cagcgccact ttccgccgtg accacgctgt agccttcgct ggtcaggcgc
    58381 aggccaagca gtttcagcaa tcccggatcg tcatcgacca ataataaatg cgcaggttta
    58441 tggctcatca ggagtgacct catgggtgga tggcgcgggc ttttcaccct cgtgcggcgt
    58501 atccggcgag aaatttccag ccggtttgcg ggtcgagagc tggcgttcaa tatcagtcag
    58561 gttttccagc ttgcgggtgg tgagttccag ttgctgctgt agaacgtgat gttgctggcg
    58621 caatgtatcc agctcgctgt cgctggcctg ctggagcttg ccgtagcgtt ggcgctcttc
    58681 cgccagttgc agttgcagcg cctgaccgtc gcgccagagt tgatacagag ggcgaacctg
    58741 tgccgggatc tcggtactta gcgcatcaat gcgcgcgacc agctggcggc gctcatacgg
    58801 cgtaattttg gcgtcggcga gcaaaatccc ttgtttaaag gtattttgcc agctgccgtc
    58861 gtcatattgg cgagcttgct gacgtgactg cgcaggcatt aaacgatcag cacaatccat
    58921 cgcccgcagc cagtaaagcg gattggtttc ggttgattta ccttgcagcg cccagatgtc
    58981 gctacattca gtagaaagat agtcagccag ttgataaacc ggaatttttt cttctgctgg
    59041 cgtatcaatg gctggcttat tgtgattctg cacgcaaccc agcaatgcca gacatggcag
    59101 ccctgccagc cacagccgtc ggggcaataa tcgttgaaaa atgtgtcgca tattcaccag
    59161 acttaaagcc tatcccagtg ggcgtaattg ttgcagacag tctggacatg gacagcgcgg
    59221 agaaaccgga gcgtacatat cgtacgtgaa gatttcgagc actgcccggg gccgaactga
    59281 caaataaaat agcctatagg ataggctgtt agcattattt cgtgtttttc gacgacggta
    59341 attcaatgcg gaaacaaacg tcttgcccgc tctcgtcgac cagatacagt tccccttgca
    59401 tacggcgaat acaatccctg gcaatgctta atcccagacc gctgcccttc accgcccctt
    59461 ttcgctggtg gcttccctga aaaaagggtt cgaagatcat ggcgcgttcc tcttgcggaa
    59521 tgggcgtgcc tgtattgatg acatcaatat aaacccgcgc accatgtgaa ctgctgcgaa
    59581 ggcaaatgtt accggattca gccccgtagt gcaccgcatt ggagtaaaga ttatccagta
    59641 cgctcatcag cagcattggc tccgccaggc aagctgttgc tttgagatcg acgtcggtat
    59701 gcatcatttt agcccgtgcg ggcaggctat gagcagaaac cactgtctcc accagcggtg
    59761 ctaattcaac attctccagt tccaccgcac tgtccgcctg tttacggttg taatcaagca
    59821 gttgttcgat cagtttttgc aaattgcggc tgctgctatc aagaatgctc accacctctt
    59881 tttgctctgg cgtaagcggc ccgacaacct ggtcagccag taattcagtg ccctcgcgca
    59941 tactcgccag tggcgttttt aattcatgag ataaatgtct taaaaattga tggcgttggg
    60001 attccagcca tgacaggcgc tcacttaacc aaagaatacg ttgcccaacc gagcgtaact
    60061 cgctcggtcc actgaacgaa acgctattgc ccagagaacg cccttccccc agacggttga
    60121 tcatgcgctc gatatttttc accggcccga taatcatccg cgtgaaaagt agcaccatca
    60181 ccagactcac cagaaatagc accagcgatt gccaaccaaa atattgccca cgttcggcga
    60241 tttcacgctg aagttgctgc ccacgagaga acaccactgt gcgcgtggcc tgcaccattt
    60301 cggtattggc actggcaaag gcttcaagac gcgcggcggc ggcagcatcg ggaccactgt
    60361 tgttacactg aagttgggcc agattgttca aatcctgacg caatgcctgg taaagtttat
    60421 cgtctggcag tacgcctgcg tgggcatcga gcatttcgct gtaacgcttg cgctggcttt
    60481 gataaacctt cgcaagcgta ggatcgtcca gcacgcaata ctgacggtag ctacgctcca
    60541 tctccagcgc cgcgttggtc atcgcttcac tacgccgggc atcaataagc gtagtgcggt
    60601 taaccagcgc cgcctgatcg ctaagcgcat tcaggctttg ccaggcttgc catgccagca
    60661 ccaacagggg tagtagaatt agcaaaaatg ccagcattac cagttgtcgt aatgagcggg
    60721 gaaaaacagg ccagcgtttc aaggtgttac tctcgtcaga cgcgaatagc ctgatgctaa
    60781 ccgaggggaa gttcagatac aacaaagccg ggaattaccc ggctttgtta tggaataagg
    60841 cggtgcctaa ctcgacgttt cgcccgatgg ttgatatagc tacgctgata tcagaagttg
    60901 gacggcaggc accttgttgt gcgtcattcg aattttatgt agcacgtccc gaaggggctg
    60961 acataagtcg gtgaatgagc cactgcttac tattatgcag taactgtgcc aataaagaaa
    61021 atagtttggt aacgtactga ttatacgttg ctttgaggga tttatggctt cttcgctatt
    61081 tgaatgtaaa tcagccactg tgtcgctaaa aagagacaac ttaagataaa cttattagat
    61141 tacaataaaa tcaatcattt aagtgtcgcc agaaagcgac acggtaaacc acccattgtc
    61201 gtgatttaca gacacaaaaa agctcccgga gttgggagct tatgatagtg gttggtgctt
    61261 aatgccggat gcggcgtaaa tgccgcatcc gggctgcaaa accaatgaac tgatgactta
    61321 ccccaactgc ttacgcgcat tgcggaaaat gcgcatccat gggccatcct cgccccagtt
    61381 ttccggatgc caggagttgc tgacagtacg gaaaacacgt tccgggtgcg gcatcataat
    61441 ggtgactcga ccactttcag tcgtaatcga cgtaataccg ttcggtgaac cgttcgggtt
    61501 agccgggtag gtttcagtga ctttgccgaa gttatcgaca tagcgcagtg ccaccagccc
    61561 tttgctttcc agtgccgcca gatgcgccgc atcacgcact tccacgcgcc cttcaccatg
    61621 agagacagca atcggcattt gcgagcccac catcccctgc aacagcagcg acgggctttg
    61681 ggtcacttca accaggctga aacgcgcttc aaagcgatcg gaggtattgc gcacaaaacg
    61741 tggccacaac tcactacctg ggatcagttc acgcagatta gacatcatct ggcaaccgtt
    61801 acataccccc agcgccagcg tttgcggacg gtggaagaag gttgcaaact catcgcgtac
    61861 acggtcattg aacaggattg acttcgccca accttcaccg gcacccagca catcaccgta
    61921 ggagaaacca ccgcacgcga ccagggcgtg gaaatcttcc aggcccgtgc gtccggtcag
    61981 caggtcactc atatgcacgt cgatagcatc aaagcctgca cggtggaaag ctgccgccat
    62041 ttcaacatgc gagttcacgc cctgctcacg cagcacagca actttcggac gtgcgccagt
    62101 ggcaatatac ggtgctgcca catcttcgtt gatatcgaac gacagtttta cattcaggcc
    62161 cggatcggcg tcgttagatt tcgcctgatg ctcctgatcg gcacactccg ggttgtcacg
    62221 caggcgctgc atctgccagg tagtttctgc ccaccagaca cgcaacgtgg tgcggctttc
    62281 gctgaataca gtctgcccgt tggcggtaat cacaaaacgg tcaccggaaa ccgcctgccc
    62341 tacataatgg acacaatcag caagcccatg ctgtgccagt acggactcga ccgcttcacg
    62401 gtcagcggca cgaacctgaa tcaccgcacc cagttcttcg ttaaacaacg ccgccaggcg
    62461 atcgtcgccc agagaggcaa tatccgcgtt aatgccgcaa tgaccagcaa aggccatttc
    62521 cgccagcgtt accagcaggc cgccatcaga gcggtcgtgg tatgcgagca gcttacgctg
    62581 tgcaaccagc gcctgaatcg cgtcatagaa gcctttcagt tgcgcgacgt tgcgtacatc
    62641 tgccggtttg tcgccaagct gacgataaac ctgcgccagc gccgttgcgc ccagcgcgtt
    62701 attgcctttg cccaaatcaa tcagcagcag tgcgttatct tcggtagaaa gctgcggcgt
    62761 gatggtgtga cgtacatctt ccacgcgggc aaatgcggaa atcaccagcg acagcggcga
    62821 cgtcatttcg cgctcttcgt taccttcctg ccagcgggtt ttcatcgaca tagagtcttt
    62881 acccaccggg atcgtaagac ccagcgccgg acaaagctct tcacccacgg ctttaacggc
    62941 ttcatacagg cccgcatctt caccagggtg gcctgccgcc gccatccagt tggcggaaag
    63001 tttaatgcgt ttgatatcac caatctgtgt tgcggcaata ttggttaacg cttcaccgac
    63061 cgccagacgg gcagaggcgg cgaaatccag cagcgcaacc ggcgcacgct cgccaatcgc
    63121 catcgcttca ccgtagtagc tgtcgaggct ggcggtagtg accgcgcagt tagcgaccgg
    63181 cacctgccac ggccccacca tctgatcgcg cgccaccatg ccggttacgc tgcggtcacc
    63241 gatggtcacc aggaaagttt tctccgccac ggtcggcaga tgcagtacgc gtttcaccgc
    63301 gtctgcaatg gtgatccctt cacggaccag cgcatcgccc ttcgctttca gcgtttgtac
    63361 atcgcgggtc atcttcggcg ttttaccaag caggacgtcc agcggcagat cgatcggctg
    63421 attatcaaaa tgacgatcgt gcagagaaag atgcagttct tcggtcgctt caccaatcac
    63481 cgcgtagggc gcgcgttcac gcttacacag ttcgtcaaac agcggtaact gatcggcagc
    63541 aaccgccagc acgtagcgtt cctgggattc gttacaccag atttccagcg ggctcatgcc
    63601 cggttcgtcg ttcagaatat cgcgcagttc gaatttaccg ccgcgtccgc cgtcgctcac
    63661 cagttccggc atcgcgttag aaagaccgcc tgcgccgacg tcgtggataa acagaattgg
    63721 gttagcatca ccaagctgcc agcaacggtc gatcacttcc tggcagcgac gctccatctc
    63781 cgggttgtcg cgctgaacag aagcaaagtc gaggtcggca tcagactgac cagacgccat
    63841 agaagacgcc gcgccgccgc caagaccgat gttcatcgcc gggccgccga gaacgaccag
    63901 tttcgcacca acgttgatct cgcctttttg tacgtgatcg gcacgaatgt tgccgatccc
    63961 gcccgccagc atgatcggtt tgtgataacc gcgcagctct tcgccattgt ggctgttcac
    64021 tttttcttca taagtacgga aatagccatt cagtgccgga cgaccaaatt cgttgttaaa
    64081 cgccgcgccg cccagcgggc cttcggtcat gatgtccagc gcggtgacaa tgcgctcagg
    64141 cttaccgaaa tcttcttccc acggctgttc gaagccagga attcgcaggt tggaaacgga
    64201 gaaaccaacc aaacccgctt tcggcttcgc gccgcgcccg gtggcacctt catcgcggat
    64261 ttcaccgccg gaaccggtcg ccgcgcccgg ccacggagaa atcgccgtcg ggtggttgtg
    64321 agtttcgact ttcatcagaa tatgcgccgg ttcctgatgg aaatcgtagc ggcccgtttc
    64381 gtggtcagca aagtagcggc ccacttcaga accttccatt acggcggcgt tatctttata
    64441 agcagagaga acgtaatctg gcgtggtttc gaaggtgttt ttgatcatct taaacagcga
    64501 tttcggctgt tgctcaccgt cgataaccca atcggcgtta aaaatcttgt ggcggcagtg
    64561 ctcggagttc gcctgggcga acatatacag ctcgatgtcg ttcgggttac gaccaagctt
    64621 tgtgaaagca tcctgcagat agtcaatttc atcttccgcc agtgccaggc caagacgcag
    64681 gttagcgtcg attagcgcct gacggccctg ccccagcaaa tcaacgctgg tgaccggagt
    64741 cggttgatgg tgtgcaaaca gctgctctgc atcatctaaa gcaaaaaaga ccgtttccat
    64801 catgcggtcg tgcagttcag cggtaacctg ctgccattgt tcattggtca gcgtaccggc
    64861 ttctatatag taagcaacgc cgcgctcaag gcggtttacc tgttgtagcc cgcagttatg
    64921 ggcaatatcg gtcgctttcg aagaccaggg agagatggtg ccaggacgcg gggtcaccag
    64981 caggagtttg ccttgcgggg cgtggctggc gagtgccggg ccatatttca gcaggcgttc
    65041 aagttgtgcg tgctcatcat cgtttaacgg cgcattgagg tcagcaaaat ggacatactc
    65101 ggcgtaaata ttgtgaaccg ggagcctggc agcctgaaaa cgtgccagca gtttgttgat
    65161 tcggaatgcc gacagtgcag gcgaaccacg cagaatttcc atcataagtc tctcgtcttc
    65221 taagctttcg gtgtacccaa gggggggaaa cgggcgtcat tataaagaat ctgatgcgct
    65281 gacgaaaccg tttgcgtgga aataaaatca ccatcgtgaa ttagcaacgc gtgccgccaa
    65341 tggctgtaat aagttgccat ctggcgcagg tttacgcaaa atgccgctca tttatgagta
    65401 aacctttcac tattattacg ttttttcaag ctgggacgcg cacgacacag agaattaact
    65461 aattgaaaaa attaaagatt aattatctgt tcatcggcat tctggcactg ctgctcgcgg
    65521 tcgctctctg gccatccatt ccctggtttg gtaaagccga caaccgtatc gccgccattc
    65581 aagcgcgggg agagttgcgt gtgagcacca ttcatactcc cctgacttat aacgaaatca
    65641 acgggaaacc ttttggcctg gattacgaac tggcgaaaca gtttgccgat tacctcggtg
    65701 taaaactgaa agtgaccgtg cggcagaata tcagccagct gtttgacgac ctcgataatg
    65761 gtaacgccga cctgctggcg gcaggactgg tctataacag tgagcgggta aaaaattatc
    65821 agcctggccc tacctattat tccgtgtcac aacaactggt ttataaagtg ggtcagtatc
    65881 gcccgcgcac actgggcaac ctgacggcgg agcaactcac cgttgcaccg ggtcacgtgg
    65941 tggttaacga tctccaaacc ctgaaagaca caaaattccc ggaattaagc tggaaggtag
    66001 acgacaaaaa aggctctgcg gaattaatgg aagatgtcat cgaaggaaaa ctcgattaca
    66061 ccattgctga ttctgtcgcc atcagcctgt ttcagcgcgt tcacccggag ctcgccgtag
    66121 cgctcgatat caccgatgaa caaccggtga cttggtttag cccgttagat ggcgataata
    66181 ccctttccgc cgccctgctc gacttcttca acgaaatgaa tgaagacggt acgctggcac
    66241 gcattgaaga gaaatacctg gggcatggcg atgattttga ttacgtcgat acgcgcacat
    66301 ttttacgcgc cgtcgatgcg gtactgccgc agttaaagcc cctgtttgag aaatacgccg
    66361 aagaaattga ctggcgtttg ctggccgcta ttgcttatca ggaatcgcac tgggatgcac
    66421 aggccacttc accgacgggt gtgcgcggca tgatgatgtt aaccaaaaat accgcgcaaa
    66481 gcctcggcat tacggatcgt accgatgccg aacagagcat cagcggtggc gtgcgttatt
    66541 tgcaggatat gatgagtaaa gtgccggaaa gtgtgccgga gaacgagcgg atctggtttg
    66601 ccctcgctgc gtacaatatg ggctatgcgc atatgctgga tgcccgcgcc ctgacggcaa
    66661 aaaccaaagg gaatcctgac agttgggctg acgtaaaaca gcgtctgcct ttacttagcc
    66721 agaaacccta ttacagcaag ctgacttacg gctacgctcg tggacatgaa gcctacgctt
    66781 atgtcgaaaa tattcgtaag tatcagatta gcctggtggg ttatctgcaa gagaaagaga
    66841 agcaggctac agaagcggcg atgcaactgg cgcaggatta tccggcggta tcgcctacgg
    66901 agttgggcaa agagaaattt ccttttctct cgtttctttc ccagtcgtca tcaaactatt
    66961 tgacccattc tccctctctg ctgttttcca ggaaagggag tgaagagaaa caaaattaat
    67021 ccgtcgagga ttgcgctttt ttctgcgctt taatttcctg gcggcgcatg cgaaagaagt
    67081 cactgagcaa cgctgcgcac tcatccgcca gtattccttc cgtaatttcc actcggtgat
    67141 tcatacccgg atgatgcagc acatccatta aagatcccgc agcgccagtt ttcgcgtcat
    67201 gcgcaccaaa gaccacgcga ccaatgcgac tgtggatcat cgctccggca cacattacac
    67261 atggttcaag cgtgacatac aacgtggcgt cgatcagacg ataattttgc atcaccagac
    67321 caccctgccg cagggccatg atttctgcat gtgcggtggg atcatggcga ccaatcgggc
    67381 ggttccagcc ttcgccgatt acccgattgt tatgcactaa taccgcgccg accggcactt
    67441 cccgctcatc ccaggcacgt ttcgccagcg tcagcgcgtg acgcatccag tattcgtggc
    67501 taaattcgac ttcagacaaa aagaaaactc cggttataaa agcgcggcgc attatacacg
    67561 gacgctatgc tttactctat tccagttgct ggagttcacc gcgcggggtt actcgccaac
    67621 gatgctgaca gaaataaagc agcggattgt cctgattact gtcgctatag ccactgtaca
    67681 gccgcagcgg agtgccgatt ttgcgctcca gttgtgcgac cttttcatgt cccagacaac
    67741 gcatcgtcaa tacccaacca ccatagccac gctgaatttg gctggcgata agattaaccc
    67801 gcggcagcca gggcgtatcg aaataaaccg cttcaaccag cggctgcgga gagccggtaa
    67861 tcaaccagat atcagcatcg gaacttaaca ggtaggtggt taatcgctcc tgaaccagcg
    67921 gaaaggcggt aacattgtcg cgaaaccagc gcacgaaatc ggcctgcaac gtctgtaaac
    67981 gtgcttcgct gtgaccaaaa gtgcaccccc acagaagcag actcatcggc cagcgtgccg
    68041 cacgaccttt tatcaataac gcaatggcta taatcggtaa caacggcagg acaagtaacg
    68101 cattcagcgg ttggcgacgc agtaaatagc gcagaaaact gccgaacata tcctgctgat
    68161 gcaatgttcc atctaagtca aaaaacacca cacgacgctc gtgagttgcc aaaccatact
    68221 cctctggact gaaacatcct gattaatttt cgctactaca tagcctaaca gatagatcat
    68281 cacttttccg gcaacaatcg accgcatcat ggctaactgg aatttttaat tcatggcaat
    68341 tagcggcaat ggaatataaa attcactcgc gtgtctctca tattgcctgt tgtcgccact
    68401 atttcatcgc gaggaaagat atgaacggct tacttcgtat ccgtcagcgt taccaggggc
    68461 ttgcccagag tgataaaaaa ctggcggatt atctgctgct acaacctgat acggcgcgcc
    68521 atttaagctc tcagcaactg gccaacgaag ccggagtcag tcagtccagc gtcgtgaagt
    68581 tcgcgcaaaa actcggctat aaaggttttc cggcgcttaa gttggcgttg agtgaagcgc
    68641 tggcaagcca gccggaatcg ccctccgtgc ccattcataa ccaaatccgc ggtgatgatc
    68701 cgttacggct ggtcggcgaa aaactgatta aagaaaatac tgccgctatg tacgcaacgc
    68761 taaacgttaa tagtgaagag aaactgcatg aatgcgtaac aatgttgcgc tctgcgcggc
    68821 ggataattct gaccggtatt ggcgcttcgg gtctggtggc gcaaaacttt gcctggaagc
    68881 tgatgaagat tggcttcaat gctgccgcag tgcgcgatat gcatgcgcta ctcgcaacag
    68941 tacaggcgtc gtcccctgac gatctgttat tagccatttc ctacaccggt gtacgacgcg
    69001 agttaaacct ggcggcagat gagatgctgc gagtgggcgg aaaagtgctg gcgattaccg
    69061 gctttactcc gaatgccctg caacagcgtg cttctcattg cctgtatacc attgccgaag
    69121 aacaagcgac aaacagcgct tcaatctctg cttgtcacgc tcagggaatg ttaacggatt
    69181 tgctgttcat tgcgctgatt cagcaggatc tggaactggc accagaacgt attcgtcata
    69241 gtgaagcgct ggtgaaaaaa ctggtctgag taaagaatgc gcgtataatg cccgcccggt
    69301 ttgtgttgtt ttgagagttt ccttatggcg ttgttaatca ctaaaaaatg catcaattgt
    69361 gatatgtgtg aacccgaatg cccgaatgag gcgatttcaa tgggagatca tatctacgag
    69421 attaacagcg ataagtgtac cgaatgcgta gggcactacg agacaccaac ctgccagaag
    69481 gtgtgcccga tccccaatac tattgtgaaa gatccggcgc atgtcgagac agaagaacag
    69541 ttgtgggata aatttgtgct gatgcaccac gcggataaaa tttaat
//
LOCUS       DAPGWB010000005        66932 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.005, whole genome shotgun sequence.
ACCESSION   DAPGWB010000005 DAPGWB010000000
VERSION     DAPGWB010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 66932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 66932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..66932
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.005"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            12..596
                     /locus_tag="RHX79_000293"
     CDS             12..596
                     /locus_tag="RHX79_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDV2195511.1"
                     /translation="MNKVTKTAIVGLLALFAGNAAATDGEIVFDGEILKSACEINDSD
                     KKIEVALGHYNAEQFRSVGDRSPKIPFTIPLVNCPVTGWEHDNGNVEASFRLWLETRD
                     NGTVPNFPNLAKVGSFAGTAATGVGIRIDDAESGNLMPLNAMGNDNTVYQIPADSNGI
                     VNVDLIAYYVSTVEASEITPGEADAVVNVTLDYR"
     gene            676..1371
                     /locus_tag="RHX79_000294"
     CDS             676..1371
                     /locus_tag="RHX79_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDV2195512.1"
                     /translation="MSKRTFAVIITLLCSFCIGQALAGGIVLQRTRVIYDASRKEAAL
                     PVANKGAETPYLLQSWVDNIDGTSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENK
                     ESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHLKGRVNDAWTSLEFKRS
                     DHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAIND
                     YGGSSGTETRPLQ"
     gene            1401..3917
                     /locus_tag="RHX79_000295"
     CDS             1401..3917
                     /locus_tag="RHX79_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HDV2195513.1"
                     /translation="MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYY
                     FDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLL
                     QPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQ
                     IALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPW
                     RLRNYSTWTRNDQASSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLA
                     SDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSG
                     DLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEAT
                     AIYGLNNTFTLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGY
                     QWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFNEANTRNWNYNSRQKSEIQFNISQTI
                     FDGVSLYASGSQQDYWGNNEKNRNISVGVSGQQWGIGYSLNYQYSRYTDQNNDRALSL
                     NLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHN
                     SSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDAN
                     GASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNR
                     GAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDETGQQSIVDEGGILYLSGISS
                     KSQSWTVRWGNQADQQCQFAFGTPDSEPTTSVLQGTAQCH"
     gene            3928..5019
                     /locus_tag="RHX79_000296"
     CDS             3928..5019
                     /locus_tag="RHX79_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2195514.1"
                     /translation="MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVT
                     VNQTDNVTGREFTSATLSSTNWQYACTCSAGKAVKLVYMVSPVLTTTGHQAGYYKLND
                     SLDIKTTLQANDIPGLVTDQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNI
                     GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTA
                     PQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMR
                     IDGTTGVVDQYNLVARRRSSDNAPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTIN
                     MRAWPVNLVGGELETGKFQGTATITVIVR"
     gene            complement(5062..5922)
                     /gene="rsmI"
                     /locus_tag="RHX79_000297"
     CDS             complement(5062..5922)
                     /gene="rsmI"
                     /locus_tag="RHX79_000297"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDV2195515.1"
                     /translation="MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAE
                     DTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPG
                     YHLVRTCREAGICVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
                     AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVK
                     EDENRRKGEMVLIIEGHKAQEEDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNA
                     LYKYALEQQG"
     gene            5986..8022
                     /gene="lpoA"
                     /locus_tag="RHX79_000298"
     CDS             5986..8022
                     /gene="lpoA"
                     /locus_tag="RHX79_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoA"
                     /protein_id="HDV2195516.1"
                     /translation="MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQ
                     ADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKT
                     LLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
                     QEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDP
                     DMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTI
                     QQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQ
                     PAPVSTPAATTTAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNV
                     EELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIP
                     RSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGTPITPRATT
                     DSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATL
                     YASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMG
                     VDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS"
     gene            7980..8375
                     /locus_tag="RHX79_000299"
     CDS             7980..8375
                     /locus_tag="RHX79_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDV2195517.1"
                     /translation="MATVPTRSGSPRQLTTKQTGDAWEVQARRWLEGKGLRFVAANVN
                     ERGGEIDLIMREGRTTVFVEVRYRRSVLYGGAAASVTRSKQHKLLQTARLWLARHNGS
                     FDTVDCRFDVVAFTGNEVEWIKDAFNDHS"
     gene            8395..8985
                     /gene="diaA"
                     /locus_tag="RHX79_000300"
     CDS             8395..8985
                     /gene="diaA"
                     /locus_tag="RHX79_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001483830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA initiator-associating protein DiaA"
                     /protein_id="HDV2195518.1"
                     /translation="MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKI
                     LCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQ
                     VRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE
                     IRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDV"
     gene            8995..9570
                     /gene="yraP"
                     /locus_tag="RHX79_000301"
     CDS             8995..9570
                     /gene="yraP"
                     /locus_tag="RHX79_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HDV2195519.1"
                     /translation="MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ
                     VDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVD
                     GANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
                     LVTEREAKAAADIASRVSGVKRVTTAFTFIK"
     gene            complement(9684..10724)
                     /locus_tag="RHX79_000302"
     CDS             complement(9684..10724)
                     /locus_tag="RHX79_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HDV2195520.1"
                     /translation="MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQPYYGKAFTA
                     AETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLR
                     TLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPAT
                     LVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFS
                     RWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVMAMAVAGCLFVI
                     PTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAV
                     SGVIVGGLALLF"
     gene            complement(10797..11432)
                     /locus_tag="RHX79_000303"
     CDS             complement(10797..11432)
                     /locus_tag="RHX79_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HDV2195521.1"
                     /translation="MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGV
                     FNPHDPQLSDALAQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLG
                     AQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNE
                     TLFAPLFRLLPGNWKSIDARDVARVMLAEAMRPGHEGVTILSSSELRKRAE"
     gene            11560..12078
                     /gene="yhbO"
                     /locus_tag="RHX79_000304"
     CDS             11560..12078
                     /gene="yhbO"
                     /locus_tag="RHX79_000304"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417622.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein/nucleic acid deglycase"
                     /protein_id="HDV2195522.1"
                     /translation="MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVK
                     GKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFA
                     ICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLP
                     AFNREALRLLGA"
     gene            complement(12058..12501)
                     /locus_tag="RHX79_000305"
     CDS             complement(12058..12501)
                     /locus_tag="RHX79_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbP family protein"
                     /protein_id="HDV2195523.1"
                     /translation="METLTAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFY
                     ILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYN
                     RRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA"
     gene            12552..12854
                     /gene="yhbQ"
                     /locus_tag="RHX79_000306"
     CDS             12552..12854
                     /gene="yhbQ"
                     /locus_tag="RHX79_000306"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708956.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage response exodeoxyribonuclease YhbQ"
                     /protein_id="HDV2195524.1"
                     /translation="MTPWYLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKG
                     ELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPKIKSD"
     gene            complement(12841..13344)
                     /locus_tag="RHX79_000307"
     CDS             complement(12841..13344)
                     /locus_tag="RHX79_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDV2195525.1"
                     /translation="MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGL
                     VATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNE
                     FGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEY
                     HEHFNRF"
     gene            complement(13338..13862)
                     /locus_tag="RHX79_000308"
     CDS             complement(13338..13862)
                     /locus_tag="RHX79_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HDV2195526.1"
                     /translation="MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQA
                     LDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAA
                     RKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
                     TAPETKQTSVGEPC"
     gene            14071..15066
                     /locus_tag="RHX79_000309"
     CDS             14071..15066
                     /locus_tag="RHX79_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017457364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDV2195527.1"
                     /translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE
                     KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEY
                     AAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPL
                     EVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLID
                     RYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR
                     SPAYVSQVAKVWRQAIDRCKADPQNFIPQSAWMETLGSMSEGTQTTLGAYHRKWQ"
     gene            15075..15953
                     /locus_tag="RHX79_000310"
     CDS             15075..15953
                     /locus_tag="RHX79_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312067.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDV2195528.1"
                     /translation="MKYSLGPVLWYWPKETLEDFYQQAATSSADVIYLGEAVCSKRRA
                     TKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNM
                     CAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
                     QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLN
                     GIQTMSGYVYNLGNELASMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANS
                     DCNGYWRRLAGLELQA"
     gene            16159..17166
                     /locus_tag="RHX79_000311"
     CDS             16159..17166
                     /locus_tag="RHX79_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDV2195529.1"
                     /translation="MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRY
                     WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLY
                     PGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPNVRPVPG
                     YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKP
                     YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGV
                     QQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELL
                     G"
     gene            complement(17284..18528)
                     /gene="mtr"
                     /locus_tag="RHX79_000312"
     CDS             complement(17284..18528)
                     /gene="mtr"
                     /locus_tag="RHX79_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HDV2195530.1"
                     /translation="MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWS
                     MAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYIL
                     TYAYISASGSILHHTFAEISLNVPARAAGFGFALLVAFVVWLSTKAVSRTTAIVLGAK
                     VITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYY
                     GKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGV
                     LNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSALGRLKTALLTFAPPV
                     VGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMITLIL
                     VFGVGNALVHILSSFNLLPVYQ"
     gene            complement(18682..20571)
                     /gene="deaD"
                     /locus_tag="RHX79_000313"
     CDS             complement(18682..20571)
                     /gene="deaD"
                     /locus_tag="RHX79_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DeaD"
                     /protein_id="HDV2195531.1"
                     /translation="MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGR
                     DVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMR
                     GVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE
                     MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP
                     DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALN
                     GDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIG
                     RTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQ
                     QQLESSDLDQYRALLSKIQPTAEGEEQDLETLAAALLKMAQGERTLIVPPDAPMRPKR
                     EFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAI
                     ANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPH
                     TGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRR
                     FGGDA"
     gene            complement(20564..20644)
                     /gene="yrbN"
                     /locus_tag="RHX79_000314"
     CDS             complement(20564..20644)
                     /gene="yrbN"
                     /locus_tag="RHX79_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YrbN"
                     /protein_id="HDV2195532.1"
                     /translation="MKIADQFHDELCRLAAINFEAHVLHG"
     gene            complement(20751..21635)
                     /gene="nlpI"
                     /locus_tag="RHX79_000315"
     CDS             complement(20751..21635)
                     /gene="nlpI"
                     /locus_tag="RHX79_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020802045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HDV2195533.1"
                     /translation="MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVIL
                     ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL
                     GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD
                     PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER
                     LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALL
                     ELSLLGQDQDDLAESDQQ"
     gene            complement(21744..23879)
                     /gene="pnp"
                     /locus_tag="RHX79_000316"
     CDS             complement(21744..23879)
                     /gene="pnp"
                     /locus_tag="RHX79_000316"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312072.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDV2195534.1"
                     /translation="MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTV
                     VGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPL
                     FPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQ
                     YVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQN
                     INELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSE
                     TIATLLAEDENLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVL
                     PRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGM
                     VGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLAL
                     MDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMD
                     IKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIK
                     DVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRV
                     YTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQ
                     GRIRLSIKEATEQSQPAAAPEAPAAEQGE"
     gene            complement(24126..24395)
                     /gene="rpsO"
                     /locus_tag="RHX79_000317"
     CDS             complement(24126..24395)
                     /gene="rpsO"
                     /locus_tag="RHX79_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDV2195535.1"
                     /translation="MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFA
                     EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR"
     gene            complement(24544..25488)
                     /gene="truB"
                     /locus_tag="RHX79_000318"
     CDS             complement(24544..25488)
                     /gene="truB"
                     /locus_tag="RHX79_000318"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDV2195536.1"
                     /translation="MSRPRRRGRDINGVLLLDKSQGMSSNDALQKVKRIYNANRAGHT
                     GALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVT
                     FSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLF
                     IRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEH
                     LRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAP
                     LEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA"
     gene            complement(25488..25889)
                     /gene="rbfA"
                     /locus_tag="RHX79_000319"
     CDS             complement(25488..25889)
                     /gene="rbfA"
                     /locus_tag="RHX79_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001712908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDV2195537.1"
                     /translation="MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMS
                     RDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS
                     LVEGMRMSNLVTSVVKHDEERRVNPDDSKED"
     gene            complement(26053..28725)
                     /gene="infB"
                     /locus_tag="RHX79_000320"
     CDS             complement(26053..28725)
                     /gene="infB"
                     /locus_tag="RHX79_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDV2195538.1"
                     /translation="MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQT
                     LIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERL
                     AAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSN
                     QQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDN
                     AEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADRE
                     EARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIK
                     AMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAP
                     VVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAA
                     FTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPD
                     RVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMAS
                     GAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSI
                     PVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMT
                     EGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASN
                     AILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLA
                     EVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVR
                     NGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA"
     gene            complement(28750..30237)
                     /gene="nusA"
                     /locus_tag="RHX79_000321"
     CDS             complement(28750..30237)
                     /gene="nusA"
                     /locus_tag="RHX79_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDV2195539.1"
                     /translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID
                     VRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTF
                     DRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLDLGNNAEA
                     VILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGE
                     EVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLW
                     DDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGW
                     ELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKEL
                     LEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGVDRDLAFKLAA
                     RGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARNICWFGDEA"
     gene            complement(30265..30717)
                     /gene="rimP"
                     /locus_tag="RHX79_000322"
     CDS             complement(30265..30717)
                     /gene="rimP"
                     /locus_tag="RHX79_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDV2195540.1"
                     /translation="MSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSED
                     GINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLV
                     LRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF"
     gene            complement(30924..31000)
                     /locus_tag="RHX79_000323"
     tRNA            complement(30924..31000)
                     /locus_tag="RHX79_000323"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30964..30966),aa:Met,seq:cat)
     gene            31348..32691
                     /gene="argG"
                     /locus_tag="RHX79_000324"
     CDS             31348..32691
                     /gene="argG"
                     /locus_tag="RHX79_000324"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDV2195541.1"
                     /translation="MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN
                     LGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNT
                     TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
                     DFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVN
                     PIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMS
                     DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQG
                     RWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKG
                     DSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSATSGVPQVENLENKGQ"
     gene            complement(32699..34324)
                     /locus_tag="RHX79_000325"
     CDS             complement(32699..34324)
                     /locus_tag="RHX79_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HDV2195542.1"
                     /translation="MTVFNKFARSFKSHWLLYLCVILFGITNLVASSGAHMVQRLLFF
                     VLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDP
                     DEVVKMLGMYIPYLCAFAFLSLLFFAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQ
                     FAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVR
                     DTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVP
                     LSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETV
                     YVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDAC
                     YDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHV
                     PMFIWYSPVLGDGVDRTTENDIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDS
                     RVVDANHDVFDYVMLRKEFTEDKQGNPTPEGQG"
     gene            complement(34783..34869)
                     /locus_tag="RHX79_000326"
     tRNA            complement(34783..34869)
                     /locus_tag="RHX79_000326"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34833..34835),aa:Leu,seq:gag)
     gene            complement(34884..35216)
                     /gene="secG"
                     /locus_tag="RHX79_000327"
     CDS             complement(34884..35216)
                     /gene="secG"
                     /locus_tag="RHX79_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDV2195543.1"
                     /translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG
                     SSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPA
                     KPTSDIPN"
     gene            complement(35444..36781)
                     /gene="glmM"
                     /locus_tag="RHX79_000328"
     CDS             complement(35444..36781)
                     /gene="glmM"
                     /locus_tag="RHX79_000328"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDV2195544.1"
                     /translation="MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRK
                     IIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISAS
                     HNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE
                     FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVG
                     ATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQL
                     RGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLD
                     KTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVK
                     AVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV"
     gene            complement(36774..37622)
                     /gene="folP"
                     /locus_tag="RHX79_000329"
     CDS             complement(36774..37622)
                     /gene="folP"
                     /locus_tag="RHX79_000329"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312083.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDV2195545.1"
                     /translation="MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHA
                     NLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEV
                     IRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE
                     VNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGM
                     SRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAK
                     ENKRYE"
     gene            complement(37712..39646)
                     /gene="ftsH"
                     /locus_tag="RHX79_000330"
     CDS             complement(37712..39646)
                     /gene="ftsH"
                     /locus_tag="RHX79_000330"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDV2195546.1"
                     /translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNND
                     QVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASI
                     FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA
                     KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG
                     SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN
                     QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH
                     MRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI
                     MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP
                     EGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWG
                     FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTD
                     NMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRP
                     VDEPRTPNPGNTMSEQLGDK"
     gene            complement(39746..40375)
                     /gene="rlmE"
                     /locus_tag="RHX79_000331"
     CDS             complement(39746..40375)
                     /gene="rlmE"
                     /locus_tag="RHX79_000331"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HDV2195547.1"
                     /translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ
                     SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRD
                     ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS
                     FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP"
     gene            40501..40794
                     /gene="yhbY"
                     /locus_tag="RHX79_000332"
     CDS             40501..40794
                     /gene="yhbY"
                     /locus_tag="RHX79_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HDV2195548.1"
                     /translation="MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHH
                     ELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR"
     gene            complement(40950..41426)
                     /gene="greA"
                     /locus_tag="RHX79_000333"
     CDS             complement(40950..41426)
                     /gene="greA"
                     /locus_tag="RHX79_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006178768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDV2195549.1"
                     /translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE
                     QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL"
     gene            41674..43107
                     /gene="dacB"
                     /locus_tag="RHX79_000334"
     CDS             41674..43107
                     /gene="dacB"
                     /locus_tag="RHX79_000334"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HDV2195550.1"
                     /translation="MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVG
                     ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV
                     ARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCF
                     SAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE
                     LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR
                     QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD
                     AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL
                     AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV
                     EPADQRNRRIPLVRFESRLYKDIYQNN"
     gene            complement(43147..44319)
                     /gene="cgtA"
                     /locus_tag="RHX79_000335"
     CDS             complement(43147..44319)
                     /gene="cgtA"
                     /locus_tag="RHX79_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HDV2195551.1"
                     /translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD
                     VWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG
                     ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLA
                     DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI
                     EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAK
                     PRWLVFNKIDLLDKAEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE
                     NPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR"
     gene            complement(44335..45300)
                     /locus_tag="RHX79_000336"
     CDS             complement(44335..45300)
                     /locus_tag="RHX79_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012135318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV2195552.1"
                     /translation="MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFL
                     MASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQ
                     VIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWG
                     VIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQ
                     LACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFAR
                     PMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE"
     gene            complement(45427..45684)
                     /gene="rpmA"
                     /locus_tag="RHX79_000337"
     CDS             complement(45427..45684)
                     /gene="rpmA"
                     /locus_tag="RHX79_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDV2195553.1"
                     /translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE"
     gene            complement(45705..46016)
                     /gene="rplU"
                     /locus_tag="RHX79_000338"
     CDS             complement(45705..46016)
                     /gene="rplU"
                     /locus_tag="RHX79_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDV2195554.1"
                     /translation="MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANG
                     EEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS
                     A"
     gene            46275..47246
                     /gene="ispB"
                     /locus_tag="RHX79_000339"
     CDS             46275..47246
                     /gene="ispB"
                     /locus_tag="RHX79_000339"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HDV2195555.1"
                     /translation="MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGG
                     KRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA
                     FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE
                     ENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA
                     DGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMN
                     ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQRDR"
     gene            47474..47752
                     /gene="sfsB"
                     /locus_tag="RHX79_000340"
     CDS             47474..47752
                     /gene="sfsB"
                     /locus_tag="RHX79_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SfsB"
                     /protein_id="HDV2195556.1"
                     /translation="MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSR
                     PWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK"
     gene            complement(47800..49059)
                     /gene="murA"
                     /locus_tag="RHX79_000341"
     CDS             complement(47800..49059)
                     /gene="murA"
                     /locus_tag="RHX79_000341"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDV2195557.1"
                     /translation="MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNV
                     PKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVA
                     RFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDK
                     VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGV
                     ERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVG
                     EDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH
                     VPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRI
                     YHIDRGYERIEDKLRALGANIERVKGE"
     gene            complement(49114..49368)
                     /gene="ibaG"
                     /locus_tag="RHX79_000342"
     CDS             complement(49114..49368)
                     /gene="ibaG"
                     /locus_tag="RHX79_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417657.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family iron metabolism protein IbaG"
                     /protein_id="HDV2195558.1"
                     /translation="MENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVK
                     KQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF"
     gene            complement(49528..49821)
                     /gene="mlaB"
                     /locus_tag="RHX79_000343"
     CDS             complement(49528..49821)
                     /gene="mlaB"
                     /locus_tag="RHX79_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312097.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HDV2195559.1"
                     /translation="MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDL
                     SRVSRVDTGGLALLLHLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR"
     gene            complement(49821..50456)
                     /gene="mlaC"
                     /locus_tag="RHX79_000344"
     CDS             complement(49821..50456)
                     /gene="mlaC"
                     /locus_tag="RHX79_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HDV2195560.1"
                     /translation="MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKN
                     EQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLK
                     QAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
                     WQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK"
     gene            complement(50475..51026)
                     /gene="mlaD"
                     /locus_tag="RHX79_000345"
     CDS             complement(50475..51026)
                     /gene="mlaD"
                     /locus_tag="RHX79_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HDV2195561.1"
                     /translation="MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYA
                     TFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIR
                     TSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNK
                     NSGDAAAAAPGNNETTEPVGTTK"
     gene            complement(51031..51813)
                     /gene="mlaE"
                     /locus_tag="RHX79_000346"
     CDS             complement(51031..51813)
                     /gene="mlaE"
                     /locus_tag="RHX79_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014071945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HDV2195562.1"
                     /translation="MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLL
                     VRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPV
                     VAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTV
                     IFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISL
                     FNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN"
     gene            complement(51821..52630)
                     /gene="mlaF"
                     /locus_tag="RHX79_000347"
     CDS             complement(51821..52630)
                     /gene="mlaF"
                     /locus_tag="RHX79_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HDV2195563.1"
                     /translation="MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSG
                     IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
                     FDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA
                     LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWIL
                     ADKKIVAHGSAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS"
     gene            52840..53817
                     /locus_tag="RHX79_000348"
     CDS             52840..53817
                     /locus_tag="RHX79_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HDV2195564.1"
                     /translation="MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTV
                     VSIGTSLPEVIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLR
                     RELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTR
                     EQLAELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAI
                     GTSLPELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDY
                     SVMLLVSIIFALLCWRRSPQPGRGVGVLLTGGFIVWLAMLYWLSPILVE"
     gene            53831..54817
                     /gene="kdsD"
                     /locus_tag="RHX79_000349"
     CDS             53831..54817
                     /gene="kdsD"
                     /locus_tag="RHX79_000349"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase KdsD"
                     /protein_id="HDV2195565.1"
                     /translation="MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEK
                     MFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIA
                     ISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAP
                     TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPH
                     VKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADV
                     MTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV"
     gene            54838..55404
                     /gene="kdsC"
                     /locus_tag="RHX79_000350"
     CDS             54838..55404
                     /gene="kdsC"
                     /locus_tag="RHX79_000350"
                     /EC_number="3.1.3.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate-8-phosphatase KdsC"
                     /protein_id="HDV2195566.1"
                     /translation="MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYM
                     GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNK
                     LIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA
                     GGRGAVREVCDLLLLAQGKLDEAKGQSI"
     gene            55401..55976
                     /gene="lptC"
                     /locus_tag="RHX79_000351"
     CDS             55401..55976
                     /gene="lptC"
                     /locus_tag="RHX79_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HDV2195567.1"
                     /translation="MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKS
                     EHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAK
                     LTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSG
                     LKMRGNLRSKNAELIEKVRTSYEIQNKQTQP"
     gene            55945..56502
                     /gene="lptA"
                     /locus_tag="RHX79_000352"
     CDS             55945..56502
                     /gene="lptA"
                     /locus_tag="RHX79_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide ABC transporter
                     substrate-binding protein LptA"
                     /protein_id="HDV2195568.1"
                     /translation="MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQS
                     LDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNG
                     KPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRV
                     TTVLVPSQLQDKNNKGQTPAQKKGN"
     gene            56509..57234
                     /gene="lptB"
                     /locus_tag="RHX79_000353"
     CDS             56509..57234
                     /gene="lptB"
                     /locus_tag="RHX79_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDV2195569.1"
                     /translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT
                     TFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAV
                     LQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH
                     GTPTEILQDEHVKRVYLGEDFRL"
     gene            57282..58715
                     /gene="rpoN"
                     /locus_tag="RHX79_000354"
     CDS             57282..58715
                     /gene="rpoN"
                     /locus_tag="RHX79_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HDV2195570.1"
                     /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESN
                     PLLEQIDTHEEIDTRETQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSG
                     DYIDDELPIYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLED
                     ILESMGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARL
                     IISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDV
                     LVRKHNGHWTVELNSDSIPRLQINQHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLE
                     SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS
                     PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
                     IMVARRTVAKYRESLSIPPSNQRKQLV"
     gene            58738..59025
                     /gene="hpf"
                     /locus_tag="RHX79_000355"
     CDS             58738..59025
                     /gene="hpf"
                     /locus_tag="RHX79_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome hibernation promoting factor"
                     /protein_id="HDV2195571.1"
                     /translation="MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVE
                     KVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH"
     gene            59143..59634
                     /gene="ptsN"
                     /locus_tag="RHX79_000356"
     CDS             59143..59634
                     /gene="ptsN"
                     /locus_tag="RHX79_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HDV2195572.1"
                     /translation="MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLS
                     LPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ
                     PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTP
                     DEA"
     gene            59680..60534
                     /gene="rapZ"
                     /locus_tag="RHX79_000357"
     CDS             59680..60534
                     /gene="rapZ"
                     /locus_tag="RHX79_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HDV2195573.1"
                     /translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTL
                     ADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRL
                     HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL
                     TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF
                     IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH
                     RTLEKRKP"
     gene            60531..60803
                     /gene="npr"
                     /locus_tag="RHX79_000358"
     CDS             60531..60803
                     /gene="npr"
                     /locus_tag="RHX79_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS phosphocarrier protein NPr"
                     /protein_id="HDV2195574.1"
                     /translation="MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA
                     EANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED"
     gene            61017..61649
                     /gene="yrbL"
                     /locus_tag="RHX79_000359"
     CDS             61017..61649
                     /gene="yrbL"
                     /locus_tag="RHX79_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP regulatory network protein YrbL"
                     /protein_id="HDV2195575.1"
                     /translation="MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIR
                     RELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR
                     YEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLI
                     PLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA"
     gene            complement(61646..62374)
                     /gene="mtgA"
                     /locus_tag="RHX79_000360"
     CDS             complement(61646..62374)
                     /gene="mtgA"
                     /locus_tag="RHX79_000360"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HDV2195576.1"
                     /translation="MSKSRLTVFSFVRRFLLRLMVVLAVFWGGGIALFSVAPVPFSAV
                     MVERQVSAWLHGNFRYVAHSDWVSMDQISPWMGLAVIAAEDQKFPEHWGFDVASIEKA
                     LAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTV
                     YLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAAVLPNPLRFKVSSPSGYVRS
                     RQAWILRQMYQLGGEPFMQQHQLD"
     gene            complement(62371..63024)
                     /gene="elbB"
                     /locus_tag="RHX79_000361"
     CDS             complement(62371..63024)
                     /gene="elbB"
                     /locus_tag="RHX79_000361"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709007.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
                     /protein_id="HDV2195577.1"
                     /translation="MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ
                     QVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLS
                     NFATLGSECTVDRELKALAQAMHQDGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTA
                     EVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE"
     gene            complement(63254..65590)
                     /gene="arcB"
                     /locus_tag="RHX79_000362"
     CDS             complement(63254..65590)
                     /gene="arcB"
                     /locus_tag="RHX79_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobic respiration two-component sensor
                     histidine kinase ArcB"
                     /protein_id="HDV2195578.1"
                     /translation="MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTM
                     VLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDL
                     SLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSF
                     LDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEK
                     VFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDAL
                     ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNI
                     FNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQV
                     ITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
                     FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSV
                     AEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK
                     PGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDD
                     VLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLI
                     TDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQS
                     PDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK"
     gene            complement(65686..66615)
                     /locus_tag="RHX79_000363"
     CDS             complement(65686..66615)
                     /locus_tag="RHX79_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312117.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HDV2195579.1"
                     /translation="MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGG
                     CTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ
                     QAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG
                     HDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHI
                     VKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC
                     ENRWTGMVELDRYLNEHGVQGSALERPWIPPTE"
BASE COUNT        16596 a        18025 c        16342 g        15969 t
ORIGIN      
        1 taaggttata aatgaataaa gttacaaaaa cagctattgt gggcttactt gcgcttttcg
       61 caggtaatgc cgctgcaacc gatggtgaaa tagtttttga tggcgagatt ttaaaatctg
      121 cttgtgaaat caatgactct gataagaaaa ttgaagttgc tcttggtcac tataatgccg
      181 aacagtttcg ttctgttggc gatcgtagcc caaaaattcc attcactatt cctttagtta
      241 actgcccagt gactgggtgg gagcacgata acggcaacgt tgaagcgtct ttccgtttat
      301 ggctggaaac gcgggataat ggcaccgtcc ctaacttccc taatctggca aaagtgggct
      361 cttttgctgg cacagcggca acaggtgtgg gtatccgtat tgacgatgcg gaaagcggaa
      421 accttatgcc actgaatgct atggggaatg ataacacggt ttatcagatc ccagcggact
      481 ccaatggtat tgtcaatgtt gacctcatcg cttactacgt atcaaccgtt gaagcatcag
      541 aaatcacccc aggggaagca gacgctgtcg ttaacgtaac gctggattac cgttaatacg
      601 ttacggcgtt atctgacctt tcagataacg cccttttcct tcctctttct cgttgtatca
      661 ggttgaaaaa taactatgtc aaaacgaaca ttcgcggtga taataacctt gttgtgtagc
      721 ttctgtatcg gccaggcgct tgcagggggt atcgttttac agcgaacgcg agtgatctat
      781 gatgccagcc gcaaagaggc tgcgttacct gtcgcaaaca aaggcgcaga aacgccttat
      841 ttactgcaat catgggtaga taatatagat ggtacaagcc gtgccccatt tattataacc
      901 ccaccgctat ttcgtcttga agctggcgat gactcatcac tgcgaattat taaaacagct
      961 gataacctgc ctgaaaataa agagtcgctg ttctacatta atgttcgtgc cattccagca
     1021 aagaaaaaat cagatgatgt taatgctaac gagttgacgc tggtatttaa aacacggatc
     1081 aaaatgtttt atcgccccgc acacctgaag ggacgggtaa acgatgcgtg gacatcactg
     1141 gaatttaaac gtagtgacca ttcactcaat atatataacc caactgaata ttacgtcgta
     1201 tttgccggac tggcagtcga taaaaccgat ctcacaagca aaattgaata tatcgcgccc
     1261 ggagaacata aacagttacc acttcctgca tctggcggaa agaacgtgaa atgggctgca
     1321 atcaatgatt atggcggcag ttccgggaca gaaactcgtc cactgcaata acaaatataa
     1381 aaaacacagg tcatcaggga atgccacaac gacaccacca gggacataaa cgcacaccga
     1441 aacagttggc gctcatcatc aaacgctgtt tgccgatggt gctcactggc agcggcatgc
     1501 tttgcactac cgctaacgcc gaagagtatt atttcgaccc cattatgctg gaaactacaa
     1561 aaagtggtat gcaaacaaca gatctgtcac gtttttcaaa aaaatacgca caactaccag
     1621 gaacttatca ggttgatatc tggctgaata aaaagaaggt ttcacagaaa aaaattacat
     1681 ttaccgccaa tgcagagcaa cttctgcagc cacagtttac ggtagaacaa ctacgtgagc
     1741 tgggtattaa ggtggatgaa atcccggcgc tggctgaaaa agatgacgat agcgtgatca
     1801 actcgcttga acaaatcatt cccggtacag ctgctgaatt tgatttcaat catcagcgac
     1861 ttaatttgag cattccccaa attgcactgt accgtgatgc aagaggttac gtctcccctt
     1921 ctcgttggga cgatggtata ccaacgctgt ttaccaacta ctcgtttaca ggttctgata
     1981 accgttaccg ccagggcaat cgtagccaac gacagtacct gaatatgcaa aatggtgcta
     2041 attttggccc ctggcgatta cgtaactatt ctacgtggac acgcaacgat caggcgtcaa
     2101 gctggaacac tatcagtagt tatttacaac gtgatatcaa ggcgttgaag tctcagttgc
     2161 ttctgggaga aagcgccacc agcggcagta ttttttccag ctacaccttt actggcgtgc
     2221 aactcgcttc cgacgataat atgttgccaa acagccagcg cggatttgcc ccaacggtac
     2281 gcggtatcgc aaacagtagt gcaatcgtga ctatcaggca aaatggttat gtgatctatc
     2341 aaagcaacgt gccagcgggt gcctttgaaa ttaacgatct ctacccctct tccaacagcg
     2401 gcgatttaga agtcacgatt gaagaaagtg acggtacgca acgtcgcttt atccagcctt
     2461 attcttcatt acccatgatg cagcgacctg ggcatctaaa atatagcgcg accgctggac
     2521 gctatcgcgc tgatgcaaac agtgatagca aggaacccga atttgctgaa gccacggcaa
     2581 tatatggttt gaataatact tttacgctgt atggcggcct gctcggttct gaagattatt
     2641 atgcgctggg gatcggtatc ggcggcacac ttggcgcact gggcgcgttg tcgatggata
     2701 tcaacagagc tgacacccaa ttcgataacc agcactcttt tcatggctat caatggcgta
     2761 cgcagtacat caaagatatc ccggaaacca acaccaatat cgctgtcagc tactatcgct
     2821 ataccaacga tggctatttt agttttaatg aagccaatac ccgtaattgg aactataaca
     2881 gtcgccaaaa aagtgaaatt caattcaaca tcagccagac aatatttgat ggggtaagtc
     2941 tgtatgcctc cggttcgcag caagactatt ggggcaataa cgagaaaaac aggaatatct
     3001 ctgttggggt ttccggtcag caatggggaa ttggttacag cctgaattat caatacagtc
     3061 gctacacgga tcaaaataat gaccgcgcac tctctttgaa tctcagtatt ccgttagaac
     3121 gctggttacc gcgtagccgg gtttcctatc agatgaccag ccagaaagat cgcccaaccc
     3181 aacatgaaat gcgtcttgat ggctcactgc tggatgatgg tcgcctgagc tatagcctgg
     3241 aacaaagtct ggatgacgat aacaaccata acagtagcct gaacgccagt taccgttcac
     3301 cttatggcac cttcagtgcc ggatacagct acggtaatga cagcagccaa tacaattacg
     3361 gcgttaccgg cggcgtggtt atccatcctc atggcgtgac gctctcgcaa tatctgggca
     3421 acgcttttgc gcttatcgat gctaatgggg cttctggcgt gaggatacaa aactatccgg
     3481 ggattgctac tgatcccttt ggctatgcag tggttcctta tctcacgact taccaggaaa
     3541 accgtctctc ggtagatact acgcagctgc ccgataacgt cgatcttgag caaacaacac
     3601 agtttgtggt gcccaacaga ggtgcaatgg tagcggcgcg tttcaacgcc aatatcggtt
     3661 atcgcgtact tgttacagtc agcgatcgca acggtaaacc gttgcccttt ggcgctcttg
     3721 ccagcaacga tgagacgggg caacaaagta tcgtcgatga gggcggcata ctatatctct
     3781 ctgggatatc gagtaaatca caaagctgga ctgtacgctg gggaaatcag gcagatcaac
     3841 aatgtcagtt tgcttttggt acaccggatt cagaaccaac aacctctgta ttacaaggca
     3901 cggcgcagtg ccattaagga taaaaaaatg aaaagagcgc ctcttataac aggacttttg
     3961 ttgatatcca catcctgcgc ttatgcctcc tcaggagggt gtggagctga cagcactagc
     4021 ggtgcgacaa attacagcag tgtggttgat gatgttacgg tgaaccagac agataacgtg
     4081 acaggacggg agtttacctc tgccacgcta agtagcacta actggcaata cgcctgtacc
     4141 tgctctgcgg gtaaggcagt taaacttgtc tatatggtca gccctgtact taccaccact
     4201 ggacatcaag caggatatta caaactcaat gatagtctgg atattaaaac cacattacag
     4261 gcgaatgaca ttccaggact cgtgactgac cagaccgttt ctgttaacac ccgattcaca
     4321 cagataaaaa gcaacaccgt atattctgct gcaacccaaa cgggtgtttg ccagggtgac
     4381 acgtctcgtt atggacccgt taatattggt gcaaatacca cctttaccct gtatgtcacc
     4441 aagccatttc tcggctcgat gaccattccg aaaacggata ttgccgtcat taaaggcgca
     4501 tgggtcgatg gaatgggaag cccgtctaca ggtgacttcc atgatttagt caagttatcg
     4561 attcagggaa atctcaccgc cccacagtcg tgcaaaatta atcagggcga tgttattaag
     4621 gttaattttg gattcatcaa tggtcagaag tttaccaccc gcaatgccat gccagacggt
     4681 tttactccag tagactttga tatcacttat gactgtggtg atacttcaaa gattaaaaac
     4741 tcgttgcaaa tgcgcatcga cggtacaact ggggtagtag accagtacaa cctggtcgcc
     4801 agacgaagaa gttcagacaa tgcgcccgat gtcggtattc gtattgaaaa tctcggcggc
     4861 ggagttgcaa atattccttt tcagaacggt atccttcccg ttgatccttc cgggcatggc
     4921 accatcaaca tgcgcgcctg gccagttaat ctggtcggtg gtgagctgga aacaggaaaa
     4981 tttcagggca ccgccaccat taccgtcatc gtgcggtaaa agaagacgtt gcgttttgat
     5041 taacgcaacg cttcggcact cttacccctg ctgctccagc gcatacttat acagcgcatt
     5101 tttcttcacg ccgtgaattt ctgccgccag cgccgccgct tttttcaacg gcagttctgc
     5161 ctgtagcagc gccagcgtgc gcagggcatc ggcgggtaag tcttcttcct gtgctttatg
     5221 accttcgata atcagcacca tttcgccttt gcgacggttt tcatcttctt ttacccacgc
     5281 cagcagctcg ccaacgggcg cgccgtgaat ggtttcccag gttttggtca gctcacgcgc
     5341 cagaaccacg tagcgggatt cgcctaatac cgcaacgata tcttccaggc tatctaacag
     5401 acggtgggtg gattcataaa aaatcagcgt gcgcggctcc gcttcaatgg cttttagcgc
     5461 atcacggcgg ccttttgatt tggcaggtaa aaagccttcg taacagaaac ggtcagaggg
     5521 taaacccgcg gcgcttaacg cagtgatagc agcacacggc ccgggtagcg gcaccacgca
     5581 aatccccgct tcacggcagg tacgcaccag atggtagcca ggatcgttaa ttagcggcgt
     5641 tccggcatcg gaaaccagcg caatgttctg cccttcttgc agcttcgcca gcagcgtttc
     5701 ggctttttgt tgttcgttat ggtcgtgcag cgcaaacaac cgggcattaa tcccaaaatg
     5761 ttgcagcaat aaaccggtgt gacgagtatc ctcggcggca atcagatcaa cggcctgtaa
     5821 tacctctaac gcacgctggg tgatatccgc cagattgccg attggcgtcg gtacaatgta
     5881 aagctggccc tgagaattat ccgccgattg gtgttgtttc attgtgtcgt ccgtattgcc
     5941 gatttaatat tgagcattgc gtaaaaaaat atcactggat acattatggt accctcaaca
     6001 ttttctcgtt tgaaagccgc gcgttgtctg cctgttgttc tggcagccct gattttcgcc
     6061 ggttgtggca cccatactcc cgatcagtcc actgcttata tgcagggcac ggcgcaggct
     6121 gattctgcct tttatcttca gcagatgcag caaagctctg atgataccag gatcaactgg
     6181 caattactcg ccattcgtgc actggtgaaa gaaggtaaaa ccgggcaggc ggttgagttg
     6241 tttaaccaac taccgcaaga actgaacgat tctcagcgtc gcgagaaaac actgctggcg
     6301 gtagagatta aactggcgca gaaagatttt gctggcgcgc aaaacttgct ggcgaaaatc
     6361 acacctgccg atttagaaca aaaccagcaa gcgcgttact ggcaggcaaa aatcgatgcc
     6421 agccaggggc gtccttccat tgatttactg cgcgcgttaa ttgctcagga accgctgctc
     6481 ggcgcgaaag aaaaacagca gaatattgat gccacctggc aggcgctctc ctccatgact
     6541 caggaacagg cgaatacgct ggtgatcaac gccgacgaaa atattctgca aggctggctg
     6601 gatctgcagc gcgtctggtt tgataaccgt aacgatcccg acatgatgaa agccgggatc
     6661 gccgactggc aaaaacgtta tccgaacaat ccgggcgcga aaatgctgcc aacgcagttg
     6721 gttaacgtaa aagcgtttaa accagcctcg accaacaaaa tcgccctgct gttgccgctg
     6781 aatggccagg cagcggtatt tggtcgcact attcagcaag gctttgaagc ggcgaaaaat
     6841 atcggcactc agccagtggc ggctcaggta gctgccgcac ctgccgcaga cgtagctgaa
     6901 caacctcagc cgcaaaccgt ggatggcgtt gccagcccgg cacaagcctc ggttagcgat
     6961 ctgaccggtg aacagcctgc ggcacagcca gcgcctgtaa gcaccccggc agcaaccacc
     7021 acagcggtaa gcgcgccagc gaatccatcc gcagaactga aaatctacga tacctcatca
     7081 caaccactta gccagatctt aagccaggtt cagcaggatg gcgcgagtat tgtggttggt
     7141 ccgttgctga aaaataacgt tgaagagttg cttaagagca acaccccgct gaacgtgctg
     7201 gcactgaacc agccggagaa tatcgaaaac cgcgtcaata tttgttactt cgcgctttca
     7261 ccggaagacg aagcgcgcga tgcagcgcgt catattcgtg accagggtaa acaagcgccg
     7321 ctggtgctga tcccacgcag ttcattgggc gatcgcgtag ccaatgcgtt tgcgcaggag
     7381 tggcagaaac tgggcggcgg caccgttctg caacaaaaat ttggttccac cagcgaatta
     7441 cgcgcgggtg ttaacggcgg ttctggtatc gctttaacgg gtaccccgat tactcccaga
     7501 gcgacaaccg actccggcat gacgaccaac aatccaacgc tgcaaaccac gccaaccgat
     7561 gaccagttca ccaataatgg cggtcgtgtc gatgcggtgt acattgtggc aacgccgggt
     7621 gaaatcgctt ttatcaaacc gatgatcgcc atgcgtaacg gtagccagag cggtgcaacg
     7681 ctgtacgcca gctcccgcag tgcgcaaggg accgctggcc cggatttccg actggagatg
     7741 gaaggcttgc agtacagcga aatcccgatg ctggcaggcg gtaatctacc gttaatgcag
     7801 caggcactca gcgcggtgaa taacgattat tcactggctc gcatgtatgc gatgggcgtc
     7861 gatgcctggt cgctggcaaa tcatttctca caaatgcgcc aggttcaggg ttttgaaatc
     7921 aacggtaata ccggaagcct gacggcaaac ccggattgcg tgattaacag gaagttatca
     7981 tggctacagt accaacaagg tcaggtagtc cccgccagtt aaccaccaaa cagaccggcg
     8041 atgcgtggga agtacaagcg cgtcgctggc tggaaggcaa aggactgcga tttgtcgccg
     8101 ctaacgtgaa cgagcgtggc ggcgagatcg atctgataat gcgtgaaggc cggaccaccg
     8161 tttttgtcga ggtacgctat cgccgctctg tgctttatgg cggcgcggca gccagtgtga
     8221 cccgcagcaa acaacacaaa ttattacaga ctgcccgctt gtggctcgcg cgtcataatg
     8281 ggagttttga tactgtggat tgccggttcg atgtggtagc cttcaccggg aatgaggttg
     8341 agtggattaa ggatgccttt aatgaccact cataattaag gtttaaggat tagcgtgcaa
     8401 gaaagaatta aagcttgctt cactgaaagc attcaaactc aaattgcggc ggcagaggcg
     8461 cttccggatg ccatctcccg tgcagccatg acgctggttc agtctctgct caatggcaac
     8521 aaaatcctct gttgtggtaa tggaacttcc gctgccaatg cacagcattt tgctgccagc
     8581 atgatcaacc gtttcgaaac ggagcggccc agcttacctg ccattgcact aaatactgat
     8641 aatgttgtct taacggcgat tgccaacgat cgcttacatg atgaagtgta tgcaaaacag
     8701 gtgcgggcgc tgggtcatgc gggagatgta ttgttagcca tttccacccg tggcaacagc
     8761 cgcgatattg taaaagcggt agaagctgcc gttacgcgtg atatgactat tgtggcattg
     8821 accggctatg acggcggcga acttgcaggt ttgttagggc cacaagatgt ggagatccgc
     8881 attccttcgc atcgtagtgc tcgcattcag gaaatgcata tgctgacggt aaattgcctg
     8941 tgcgatctga tcgataacac gcttttccct caccaggatg tttaaggaga atacatgaag
     9001 gcattatcgc caatcgcagt ccttatttcc gcgctgctgt tgcaaggttg tgttgccgct
     9061 gccgtagtgg gtaccgctgc tgtgggtacc aaagccgcaa ctgacccacg cagtgtcggc
     9121 acccaggtgg acgatggtac cctggaagtg cgcgtgaaca gcgcattgtc gaaagacgaa
     9181 cagattaaga aagaagcccg tattaatgtc acggcgtatc agggcaaagt gctgctggtt
     9241 gggcagtcac caaacgctga actttcggct cgcgccaaac agattgctat gggcgtagac
     9301 ggtgccaacg aagtgtataa cgagattcgt cagggccagc cgattggtct gggcgaagcg
     9361 tctaacgata cgtggatcac caccaaagtg cgttcgcagc tcttaaccag cgacctggtg
     9421 aaatcgtcca acgtgaaagt gaccaccgaa aacggtgaag tgttcctgat ggggctggtg
     9481 actgaacgtg aagcgaaagc ggcggcagat attgccagcc gggtgagcgg cgtaaagcgg
     9541 gtaaccacag cgtttacgtt tattaaatag cagccccttg taatgcctga tgcgacgctt
     9601 gccgcgtctt atcaggccta caacgatgca aaccgtaggt cggataaggc gtttacgccg
     9661 catccgacat gttttccctc aaatcagaac aacagcgcca gcccgccgac aatcacacca
     9721 gacactgcca ccatcgcccc tgtcagccat aaggctttcg ctgggaacgc tttgcgcagc
     9781 ataatcagtg acggcaaact caccgccggg agcgtcatca acaatgccag cgccggagca
     9841 gttcccatac ctgccagcat catcgtttgt acaatcggaa tttctgctgc cgtgggaatg
     9901 acaaacaagc atcctgctac cgccatcgcc atcacccaca tcaggctgtt atcgacagca
     9961 ccatcggcat gggggaataa ccagacgcga gcggcaccca acaccagtac tgcaaggatg
    10021 taaaccggga tcgtactcca gaaaagcgtc catagcgccc tgccccagcg gctaaaaaaa
    10081 ccgccctgtg cttccggtat gtcaatttcg accggtgcct gcgtttgcgg tgtttcacgc
    10141 acccattttt gcaccagcgt cgcaatcagc aacaccatca ccagcccggc caccagacga
    10201 atcgccgcaa aaccccagcc gaggacaaac cccataaaca ccagcgtcgc cgggtttaac
    10261 accggattgc ccatccagaa tgccagcgca ccgcccatcg acacctgttg gcgacgcatt
    10321 cccgccgcga ccggagccgc acagcaggta cacatcatgc ccggcagcga aaacagcgtt
    10381 cccagcagcg tgccgcgaaa gcgcgattgc ccaagcgtac gcaacaacca gtcacgcggg
    10441 atcagcacct gaatcaacga accgaggatc acccccagca ctgccgcttt ccataccgcg
    10501 aggaaataga tcatcgcgta atccaacgcc gcctgccacg gattagcatc cgcctgcgca
    10561 aggatagatt taccgatact gtgggtttcg gcagcagtaa acgctttgcc gtagtaaggt
    10621 tgccatttca cataccagag accggcaatg acaacgagaa agaaaagcgc gggtttccac
    10681 cactgaatgg gcgttgccgc ctgagatgaa gactgaccag tcatagcatt ccccaggaat
    10741 aagttatgat aattgagcgc gtgaatatta cgctcactat caattcttgg gaataattat
    10801 tcagctcttt tgcgtaattc tgaagagctt aaaatcgtca caccttcatg cccgggccgc
    10861 atcgcctctg ccagcatgac ccgcgccacg tctctcgcat caatggattt ccagttaccg
    10921 ggtaataaac ggaacagcgg cgcaaaaagc gtttcgttca tccgctgttt gctacgatcg
    10981 cccagtaaca tcgacgggcg agcaatggtc aatttcggcc agttctgggc gattaatgct
    11041 tcttccatct cccctttgac gcggttatag aaaaacggcg agtgggcatt ggcacccata
    11101 gcactgacca ccagcatatg ctgcgcgccc agtcgccgcc cggttaatgc ggtatccact
    11161 accagcgtgt aatcggcatg aataaacgcc tctttgctcc ccgcttctcg ccgcgtggtg
    11221 ccgagacaac aaaacacaat gtcgatggga tcggtgacct gcgccagcgc gtcactcagt
    11281 tgcggatcat ggggattaaa caccccgggc atatcgccca acggacgtcg cgtcggcgca
    11341 gcaatggcgt taactttcgg ttcgttaatc aacatccgca gcaggtgacc gcccaccagc
    11401 cccgttgcgc ctgtaatcag tacctgactc atcttcgctc ctttacagaa ttgtctgcct
    11461 tgcgctccac ggctcatgca ccaggcttaa tagaccatga ggtaattatc cccgattgtg
    11521 ggaaattcgc ctcatccaat gcaacaacgc ggaggaagca tgagtaagaa aattgccgtt
    11581 ttaatcactg atgaatttga ggattcagaa tttacttcac ccgcagacga gttccgtaaa
    11641 gccggacacg aagtgattac cattgaaaaa caagcgggta aaacggtgaa aggcaaaaaa
    11701 ggagaagcca gcgtgaccat cgataaatcc atcgatgaag tgacgcctgc ggagtttgat
    11761 gccctgctgc taccgggcgg ccattcaccg gattatctgc gtggggacaa ccgttttgtc
    11821 acctttaccc gtgattttgt gaatagtggc aaaccggtgt ttgccatctg tcacggcccg
    11881 cagttgctga tcagcgccga tgtgattcgg gggcgcaagc tgaccgcagt taaaccgatc
    11941 attattgatg ttaaaaatgc gggcgcggaa ttttacgatc aggaagttgt ggttgataaa
    12001 gatcagctgg ttaccagccg gacaccggac gatctgccag cgtttaaccg cgaggcgtta
    12061 cgcctgctcg gtgcctgagt cgcgtagcca aatcattttt ttaccaaagc ccagcgtgtt
    12121 gtcggtgaat ttgatttcat cgagccggat ttcccatacc ggggccgaca gcattctggc
    12181 aaccggaaag cgacggttgt acgccttgcg tgcgaggtcg ctttcctcac cttccagcct
    12241 gcggatctca cctttaaact gcacaccgcg aattaacgct actgttttcg gctgaccgtt
    12301 taccgttccg gcaactgccg cctgcggccc actcatctgc gcatgacgtg ttttttcttc
    12361 cgtcaaaatg tagaaggcga ctttctgtgc atcaaaaaga taaaaggcat tggcgcacca
    12421 gagttcccct tcctgctgca cacaccaggt gacaacatgt tgttttgcca gccaacgact
    12481 gatggcggtg agtgtttcca ttgctgttct cttttatact gttggcctga ccttaacatg
    12541 tgacgcagac gatgacaccc tggtatcttt acttgatccg taccgccgac aataagcttt
    12601 ataccgggat caccacggat gtcgaacgcc gctatcagca acatcaaagc ggcaaagggg
    12661 cgaaagcact gcgcgggaaa ggagaactga cgctggcgtt ttctgcgcca gtgggcgatc
    12721 gttcgctggc gttacgggca gaatatcgcg ttaagcaact gaccaaacgg caaaaagagc
    12781 gtctggtagc ggaaggcgca gggtttgcag agctgttgag cagcctgcaa accccaaaga
    12841 ttaaaagcga ttgaaatgct cgtgatactc aaccaggccg gtaacgccat tcagcgcgtc
    12901 atccgctaaa cgatgtacct ggaaggcgct ttcagtgccc ggccagcggc aacgcagatc
    12961 gtgatgcgcc gccagttcaa agccgaaacg actgtacagc gccggatcgc ccagcgtcac
    13021 cactgcggca tagccgaact cattaagcga atcgagtcct tcatagacca gttggcgtgc
    13081 cagcccctgt ccacggtatt tttcatcaac cgccaacggt gccatgccga cccattgcag
    13141 gtcttcgccc tgcacatcaa ccggactaaa tgccacatag ccaatgacct gaccttcgtc
    13201 atctgtcgcc accagcccca gcgtcagaaa gccatcttca cgcagatcgt gaaccagctt
    13261 cgcttccgca tcactttcga atgagcgacg cagcagggca tcaatacccg gcgcatcaat
    13321 gggaatttct actcgaatta gcatggttca cctaccgatg tctgtttggt ttcaggcgcg
    13381 gttttcattc ccgcctcaac aaaatccgcc agttgcagca gcatcatgcg taaggctttc
    13441 ggcatttgct ccagttcaat ggcgtccatc aggtttttca catacagccc cagctccgta
    13501 tcgccttcaa tcaccagccg acgctggaag aagagcgtat ccggatcttg tttacgcgcc
    13561 gcaatcatca gcagatcgct ggcgtcggca ctaaaactca catcagcttg cgcgttctgg
    13621 ctgaccacca gtttgccatt caccaccgag gtaaaccatt gcaggtcaat atcacgcaca
    13681 tgaatactta accagcggcc ttcaagaaac tccagctcac catcatccag cgcctgacgg
    13741 aattgccagc ttaagacctg ctcaagaacc tggcgtttta gcgcaaatgg cgtcagtttt
    13801 accggtacac tcaacagaga tggccccaaa tgcacaatac gggaacgcag tttatccaac
    13861 acgagtttta ctccctgttt caacaatcat cctattttgc catatcagaa aaataacata
    13921 gcggtataaa tcaacaattc catatgaaat tgctgctacc accaatacaa ctttaactgc
    13981 cttaaatcaa aaattgtcgc agcaaggtta actaaaatcc cagttcgtta acatttttgc
    14041 gttttgatag cgcaaccttc aggaaaaatt atggagctgc tctgccctgc cggaaatctc
    14101 ccggcgctta aggcggccat cgaaaacggc gcagatgctg tttatatcgg gctaaaagat
    14161 gataccaatg cccgtcactt cgccggcctt aactttaccg agaaaaaatt gcaggaagcg
    14221 gtgagttttg tccatcaaca tcgccgcaaa cttcacatcg cgattaacac ttttgcgcat
    14281 ccggacggtt acgcccgttg gcagcgcgcc gtggatatgg cggcgcagct gggtgccgac
    14341 gcgctgatcc tcgccgacct cgccatgctg gaatacgccg ccgagcgtta tccgcatatt
    14401 gagcgccacg tatcggtgca ggcttcggcg accaatgaag aggcgattaa cttttatcat
    14461 cgccattttg acgttgcccg cgtggtgctg ccgcgcgtgt tgtcgattca tcaggtgaaa
    14521 cagctggcac gggtcacacc tgtaccactg gaagtgtttg ctttcggcag cctgtgcatt
    14581 atgtcggaag gccgttgcta tctgtcgtcg tatctgacgg gtgagtcgcc taacaccgtg
    14641 ggcgcgtgtt ctccggcccg tttcgtgcgc tggcaacaaa cgccgcaggg gctggaatcc
    14701 cgcctgaacg aagtgctgat cgaccgttat caggacggcg aaaacgcagg ttatccgacg
    14761 ctgtgtaaag ggcgttatct ggtggacggc gagcgctatc acgcgctgga agaaccaacc
    14821 agtctcaata ccctggaact gctgccggag ttaatggcgg cgaatattgc ttcggtgaaa
    14881 attgaaggcc gccagcgtag cccggcgtat gtcagccagg tggcgaaagt ctggcgtcag
    14941 gctatcgacc gttgtaaggc cgatccgcaa aacttcatac cgcaaagcgc gtggatggag
    15001 acgctcgggt cgatgtccga aggcacgcag accacccttg gcgcgtatca ccgtaaatgg
    15061 cagtgagaag agcaatgaaa tattccttag ggccagtgct gtggtactgg ccaaaagaga
    15121 cgctggaaga tttttatcag caggccgcca ccagcagcgc cgacgtgatt tatcttggtg
    15181 aagcggtatg cagcaagcgc cgggcaacca aagttggcga ctggctggag atggcaaaat
    15241 cgctcgccgg aagtggcaag cagattgtgc tctccacgct ggcgctggtg caggcatcct
    15301 ctgaactggg cgaactgaaa cgctatgttg agaacggtga gtttctgatt gaagccagcg
    15361 atctcggcgt ggtgaatatg tgcgctgaac gcaaactgcc gttcgtcgcc gggcacgcgc
    15421 tgaactgcta caacgcggtg acgctgaaaa tattgctcaa acagggcatg atgcgctggt
    15481 gtatgccggt ggagctttcc cgcgactggc tggtgaatct gcttaatcag tgcgatgagc
    15541 tgggcattcg caaccagttt gaagtggaag tcctgagcta cggtcatcta ccgctggcct
    15601 actccgcccg ctgctttacc gcgcgttcgg aagaccgccc gaaagatgag tgtgaaacct
    15661 gctgcattaa gtatccgaac gggcgcaacg tgctgtcgca ggaaaaccaa caagtgtttg
    15721 tactcaatgg cattcagacc atgagcggct acgtttacaa cctcggtaac gagctggcat
    15781 ccatgcaggg gctggttgat gtggtccgcc tgtcaccgca gggtactgac actttcgcga
    15841 tgctcgacgc cttccgcgct aatgaaaatg gcgctgcacc actgccgttg acggcgaaca
    15901 gcgactgtaa cggctactgg cggcggctgg ccgggctgga gctgcaagcc taagtaaata
    15961 tgctcgtcat acttcaagtt gcatgtgctg catctgcatt cgttcacccc agtcacttac
    16021 ttatgtaagc tcctggggat tcactctctt gtcgccttcc tgcaactcga attatttaga
    16081 gcacagctca ctttgttaac aactttaact actctttaat gcagtattaa agattaatcg
    16141 gtaacaaagt gagctgttat gactgataaa accattgcgt tttcgctact cgatctggcc
    16201 cccattcccg aaggttcttc agcgcgagaa gcattctccc actctctcga tctcgcccgt
    16261 ctggctgaaa agcgcggcta tcatcgctac tggctggcag aacaccacaa tatgactggc
    16321 attgccagtg ctgccacgtc ggtattgatt ggctatctgg cggcgaatac caccacgctg
    16381 catctggggt ctggcggcgt gatgttgcct aaccactcac cgttggtcat tgccgaacag
    16441 ttcggcacgc tcaatacact ctatccgggg cgaatcgatt tggggctggg tcgtgcgcca
    16501 ggtagtgacc aacggacaat gatggcgctg cgtcgccata tgagcggcga tattgataat
    16561 ttcccccgcg atgtcgcgga gctggtggac tggtttgacg cccgcgatcc caatccgaat
    16621 gtgcgcccgg taccaggcta tggcgaaaaa atccccgtgt ggttgttagg ctccagcctt
    16681 tacagcgcgc aactggcggc gcagcttggt ctgccgtttg cgtttgcctc acacttcgcg
    16741 ccggatatgt tgttccaggc gctgcatctt tatcgcagca acttcaaacc gtcggctcga
    16801 ctggaaaaac catacgcgat ggtgtgcatc aatattatcg ccgccgatag caaccgcgac
    16861 gctgagtttc tgtttacctc aatgcagcaa gcctttgtga agttgcgccg tggcgaaacc
    16921 gggcaactgc cgccaccgat tcaaaatatg gatcagttct ggtcgccgtc cgaacagtat
    16981 ggtgtgcagc aggcgctgag tatgtcgttg gtaggtgata aagcgaaagt gcgtcatggc
    17041 ttgcagtcga tcctgcgcga aaccgacgcc gatgagatta tggtcaacgg gcagattttc
    17101 gaccaccagg cgcggctgca ttcgtttgag ctggcgatgg atgttaagga agagttgttg
    17161 ggatagtgtg tcttaacgcg ggaagcctta tccgagctgg caacgctgtc ctacgtagac
    17221 ctgataagcg aagcgcatca ggcattgtgt aggcagcaga aatgtcggat aaggcaccgc
    17281 tgattactga tacaccggca gtaaattaaa gctcgataaa atatggacca gtgcgttgcc
    17341 aacgccaaac accagaatca gcgtaatcat cggcttgccg ccccagacgc ggaatttcgg
    17401 gctgccaaag cgtttacgcg atgcgcgggc taacagcgcc ggaacaattg ccgcccagat
    17461 ggtagctgct aaaccagcat aaccaatggc gtacaggaat ccgttcggga acagtagacc
    17521 acccacaaca ggcggggcaa aggtcagcaa tgccgttttc aagcgcccca gggctgagtc
    17581 atcgaaacca aacagatctg ccagatagtc aaacaaaccc agcgttacgc caaggaacga
    17641 actcgctacc gcaaagtttg agaacacgac cagcagaagg tccaggctac ggctgttcag
    17701 cacgccgctt aatgcctgta ccagcacatc aatattaccg cccttctctg caataccgat
    17761 aaactccgga cgcgggatgt tacccatcgt cgccagcaac cagatggtat acagcgccag
    17821 tgccatcagc gtaccgtaca ccaggcattt cacgatggtt ttcggatctt tgccgtaata
    17881 cttcatcagg cttggcacgt taccgtgata accaaacgat gccagacaga acggcaaggt
    17941 catcaacaga tacggtgcat aagacgcatt gctttcagcg acgttgaaca atgtcgcagg
    18001 ctgcacatgc cccagcaggc taccgaaggt gaggaagaag gtaatgactt tcgcccccag
    18061 tacaatcgcc gtcgtgcggc tgaccgcttt ggtgctcaac cacacaacaa aagccaccaa
    18121 cagtgcaaaa ccaaaacccg ctgcccgtgc cggtacgttc aatgatatct ctgcgaaggt
    18181 atgatgcaga atcgaaccgc tggcagaaat ataggcatag gtcaggatat agagcacaaa
    18241 ggcaatggaa atgccgttga ccacgttcca gcctttgccc agcaaatctt tggtgatagt
    18301 gtcaaaactc gaaccgattc ggtaattcag gttagcttcc agaatcatca agccggaatg
    18361 cagcatacag aaccaggtga agatcagcgc cgccattgac cagaagaacc acgccccgga
    18421 catgaccact ggcagagaaa acatccctgc gccaataatg gtgccgccga taatcaccac
    18481 gccgccaagc agcgacggtg acgtttgggt ggtggttagt gttgccatga gggcttctct
    18541 ccagtgaaaa atagtgcgac tgcgttgtta tgtattgcac tgtaccagta cacgagtaca
    18601 aaagacagaa aaaaagcccc gatggttcaa atcggggctg tatatattat tttacagact
    18661 gtgttcgctg ttcagcgatg attacgcatc gccaccgaaa cgacgacgac cggtagagtc
    18721 atcacgacgc ggtgcgcggc cttcacgacg ttcgccgcta aaacgacgac catcaccacg
    18781 accaccttca cggcgttcac cgctgaagtt acgaccgcct tcacgacgct cgccaccgaa
    18841 accacgacca ccgccacgac gctcaccgcc agtatgcggc tgcgcatcgc ccagcaactg
    18901 catattcatc ggcttgttca gaatgcgagt acgcgtaaag tgttgcagta cttcacccgg
    18961 catacctttc ggcagttcga tagtggagtg agaagcaaac agcttaatgt taccgatgta
    19021 acggctgctg atgtcgcctt cgttagcaat cgcgccaacg atatgacgaa cttcaacacc
    19081 atcatcgcgg cccacttcaa tgcggtaaag ctgcatgtca ccaacatcac gacgttcacg
    19141 acgcggacga tcttcacggt cgccacgtgg gccacggtcg ttacgatcgc gcggaccacg
    19201 gtcatcacgg tcacggaatt cacgtttcgg acgcatcggc gcatctggcg gaacaatcag
    19261 agtacgttca ccctgtgcca ttttcagcag tgccgcagcc agagtttcga gatcctgctc
    19321 ttcaccttct gcagtcggct gaattttgct cagcagtgcg cggtattgat ccagatcgct
    19381 gctttccagc tgctgctgta ctttagcggc gaatttttcc agacggcgtt tgcccagcag
    19441 ttctgcgttc ggcagttcta cttccggaat agtcagcttc atagtacgtt caatgttgcg
    19501 cagcagacga cgctcgcggt tctcaacgaa cagcagcgcg cggccagcac gacccgcacg
    19561 accggtacga ccgatacggt gaacgtaaga ctcagaatcc atcgggatat cgtagttaac
    19621 taccaggctg atacgctcaa cgtccaggcc acgggctgca acgtcggtcg caatcaggat
    19681 gtccagacga ccatctttca ggcgttccag tgtctgttca cgaagcgcct ggttcatgtc
    19741 accgttcagc gcggcgctgt tgtagccgtt acgctcaaga gcttcagcca cttccagagt
    19801 cgcgtttttg gtacgaacga agataatcgc cgcatcaaaa tcttccgctt ccaggaaacg
    19861 taccagtgct tcgtttttgc gcatacccca gacagtccag tagctctggc tgatgtcagg
    19921 acgggtagtc acgctggact gaatgcgcac ttcctgcggc tctttcataa agcggcgggt
    19981 aatgcgacga atcgcttccg gcatggttgc agagaacaga gcggtctgat gaccttccgg
    20041 gatctgcgcc ataatggttt caacgtcttc gatgaagccc atgcgcagca tttcgtcagc
    20101 ttcatccaga accagaccgc tcagtttaga gaggtccaga gtgccacgtt tcaggtggtc
    20161 cagcagacgg cccggagtac cgacaacgat ctgcggcccc tgacgcaggg cgcgtaattg
    20221 cacgtcataa cgctggccgc cgtatagagc aaccacattt acgccgcgca tgtgtttaga
    20281 gaaatccgtc attgcttcag caacctgtac cgccagttcg cgggtcggtg ccagcaccag
    20341 aatctgtggt gctttcagct caggatcaag attctgcaac agaggtaaag agaatgctgc
    20401 agtttttccg ctccccgtct gggccatacc cagaacgtcg cggccattca gcagatgtgg
    20461 aatacactct gcctgaattg gagatggttt ttcgtaaccc agatcgttaa gggcttcaag
    20521 gataggagcc ttcaggccca gatctgcaaa agtggtttcg aattcagcca tgtagtacgt
    20581 gtgcctcaaa attaatggcg gccagtctac ataactcatc atgaaattga tcagcaattt
    20641 tcattgaaaa gtgtgaaccg gctcaaagta ggtgtattaa cgaacaacaa cgccctcacc
    20701 cgttaaggtg atggcaatca aaaaagatta cgggctgatg tgtacgtcag ctattgctgg
    20761 tccgattctg ccaggtcatc ttggtcctgg cccaggagcg ataattccaa caatgcgtat
    20821 cggtgctcaa caaagttatg aacgttgttg gcaaccgcca gtttgaacag tgccgtggcg
    20881 ctgtccaaat cccccagact taggtagtac ttacctaaat agaagttggt ttcactgaga
    20941 tgctcagcga gcgaggtgtt atccgttgcg tccgccttga gcctttccat taacgtttgt
    21001 tcgctaatgt tgcccaggta gaactcgaca atgttccatc cccactgttc cttatccgat
    21061 ttttcgaagt gctgtttcaa cacttcttta gcctgcttct catcgagctt ctgctcggcg
    21121 agataaagcc acagactacg gaaaggatca ttgggatcgt cttgataaaa cgccagcaga
    21181 tcatcttgcg ctaacttgtc acgaccgccg taatataatg cgatcccgcg attcaagtgc
    21241 gcgtagttgt aagttggatc aagctcaagt acagaatcaa acgcttcata ggcagcatca
    21301 aaattgcctg cctgcgttaa atatatgcct aagtaattga atacttcagg catatccggt
    21361 cggattgcca gcgcttgcga aaaatcgtta cgcgctaatg ccctcagacc gagactatca
    21421 tacaacactc cgcgctcata taaaagctgt gcgcgttcgt catcggttaa agcccgactg
    21481 gcaaggattt gttccatacg tgccagaatc acttcctgct gtaaagtcgg ttgcaatggt
    21541 accgcgagga cttcactttt acgccaggaa gtattactgc atcctgcaag cgtaagtgct
    21601 gtcgcaacga aacaccagcg caaaaaaggc ttcatttccc actcccgaag accacggttg
    21661 aatgaacgtc ctgttcccgg ttgctaacaa ggcgtcctgc ccggttaaaa gccccccgcc
    21721 gcagcggagg gcaaatggca accttactcg ccctgttcag cagccggagc ttccggtgct
    21781 gcagcaggtt gagactgctc agtcgcttct ttaatgctca gacggatacg gccctggcga
    21841 tcaacttcca gaactttcac cggtacttcc tgacccatct gcaggtaatc ggtcactttc
    21901 tcaacgcgtt tgtcagcgat ttgagagatg tggaccagac cttctttacc gccgccgatg
    21961 gcaacaaatg cgccaaagtc aacgatacgg gtcactttac cagtgtagac gcggcccact
    22021 tcgatttctg cagtgatctc ttcgatacga cgaatagcat gtttcgcttt ctcgccgtcg
    22081 gtcgctgcga tcttcacagt accgtcatct tcgatttcga tggtagtgcc agtttcttcg
    22141 gtcagggcac ggataacaga gccgccttta ccgataacgt ctttgatctt atccgggttg
    22201 atcttgatgg tatggatacg cggtgcgaac tcagagatat cgccacgcgg cgcgttgatc
    22261 gcctgttcca ttacgcccag gatatgcaga cgcgcacctt tagcctggtt cagcgcaacc
    22321 tgcatgatct ctttggtgat accttcaatt ttgatatcca tctgcagtgc agagataccg
    22381 tcgcgggaac ctgcaacttt gaagtccata tcgcccaggt gatcttcgtc gcccaaaatg
    22441 tcagacagta caacgtagtt gtcgccttct ttcaccagac ccattgcgat acccgcaacg
    22501 gcagctttga ttggcacacc tgcgtccatc agcgccagag acgcgccgca cacggaagcc
    22561 atagaagaag aaccgttgga ttcggtgatt tcagacacta cacgtacggt gtacgggaat
    22621 ttgtccatat ccggcatgac tgccagcacg ccgcgcttcg ccagacgacc gtgaccaatt
    22681 tcacgacgct tcggagaacc gaccatgccg gtttcgccta cggagtacgg agggaagttg
    22741 tagtggaaca ggaaggtatc ggtacgttcg cccatcagtt catcaagaac ctgcgcgtca
    22801 cgagcggtac ccagcgttgc agtaaccagt gcctgcgttt caccgcgggt gaacagcgca
    22861 gaaccgtgag tacgcggcag cacgccagta cgcacatcca gaccacggat catatctttt
    22921 tcacgaccgt cgatacgcgg ttcgcctgcc agtacgcggc tacgaacaac gtttttctcg
    22981 atagcgtgca gaatttcacc cagttcgttt tcgtccaggt tttcgtcttc agcaagcagc
    23041 gtcgcgatgg tttcagattt gatgacatca acctgcgcat aacgctcttg tttgtcggtg
    23101 atgcggtaag catcgctcag gcgagcttca gccagtgcag caacgcgcgc gttcagcgct
    23161 tcgtttaccg gctccggctg ccagtcccaa cgtggtttac cggcttcttt caccagttca
    23221 ttgatgttct gaataacaac ctgctgttgt tcatgaccga acactactgc gcccagcatc
    23281 tggtcttcgc tcagcagttc agcttcagat tcaaccatca gaacagcggc ttcagtaccg
    23341 gcaacaacca gatccagttt gctctctttc agctcgtcct gagtcgggtt cagtacgtac
    23401 tggtcattga tgtaacctac gcgagcagca ccaatcggac cattgaacgg aataccagac
    23461 agagacagtg ctgcggaagc accaatcatc gcgacgatat ccgggttaac ttgcgggtta
    23521 acagaaacca cggtggcgat aacctgaact tcgttgacga agccttccgg gaacagcggg
    23581 cgaatcgggc ggtcaatcag acgcgcgatc agggtttcgc cttcgcttgg gcggccttca
    23641 cgacggaaga agctacccgg gatacgacca gcagcgtagg tacgctcctg atagttaacg
    23701 gtcagtggga agaagtcctg acctggtttg gcttttttct ggccaacaac ggtaacaaat
    23761 accgcggtgt catccatgct aaccataaca gcggcagtag cctgacgagc catcatgccg
    23821 gtttccagag tcacggtgtg ttggccgtac tggaatttac gaacgatcgg attaagcaat
    23881 gtaatatcct ttctctttct tagacagtac cttacggcac tggtgttaat acccgatctt
    23941 ctgcgcatcc tcgcgactaa tgacaaccct aacccagctc tatgtgggta aagcctctca
    24001 ttagccgcgc gaacctctgc aacggaagat cattcatagc aacaatacat tagtttccag
    24061 tgaattgctg ccgtcagctt gaaaaaaggg gccactcagg cccccttttc tgaaactcgc
    24121 aagaattagc gacgcagacc caggcgctcg atgagctggg tgtaacgtgc tacgtcttta
    24181 cgtttcaggt agtcgagcag tttacgacgc tgagaaacca tgcgcagcag accacgacgg
    24241 ctgtggtgat cttttttgtg ctctgcaaag tggccctgca ggtggttgat ctgtgcagtc
    24301 agcagtgcta cctgaacttc ggtagaaccg gtgtcgtttg cgtcacgacc aaactcagaa
    24361 acgattttag ctgttgcttc agtacttaga gacattttaa aactccaaag tatatagaat
    24421 gaaaggacgc cgatctctaa ttcagcgatc ccagtgtacg ttacgcaaag tgttaaacaa
    24481 tttacgcgac gttaagcggc agtattctac tcgtagcgac ctgttatcgc aagacggtta
    24541 acattacgcc gggtattcaa ccaccaggcg acgaggcgca acgcggcctt catcgtcaat
    24601 ttcgcccata ccgataaatt tgccgttctc accttctgta acgcgaacca gtccttccag
    24661 cggcgcaccg gatgtacgaa ctgggttacc atttttgaag taaacagaag acgttaacgg
    24721 aagattcacc accgggtagt ccgaagctgg actgtccatt ggcatcagta atggatcaag
    24781 taactccgca gccggaatat cctgctgttc ggcttgttcg accagttcac gcagatgttc
    24841 cagggtcacc atccgttcaa ccggatattt acttaccgcc agacgacgca ggtaaataac
    24901 atgcgcgcca caaccgagtt tttcacctag gtcatcaatg atggtgcgga tataagtgcc
    24961 ttttgagcag tgaatttcca gctccagctc attgccttcg tggcgaataa acagcaattc
    25021 ataaacggta atcgggcgcg cttcacgcgg tacttcaatg ccctgacgcg catattcgta
    25081 cagtttttta ccctgatatt tcagtgctga atacatcgaa gggatctgtt cgatatcgcc
    25141 acggaaagta tccagcgccg ccgccagttg ctctgcgcta aaggttaccg gacgttcttc
    25201 aacgatttgt ccgtcggcat cagaagtatc ggtacgctgt ccaagacgcg caatgacccg
    25261 atagcgtttg tcggagtcca gcagatactg ggaaaacttc gtcgcttccc cgaggcaaat
    25321 tggcaacatg ccagttgcca gcgggtccag cgcaccggta tgcccggcac ggttggcgtt
    25381 ataaatccgt ttcacttttt gcagcgcatc attgctggac ataccctgcg atttatccag
    25441 caacaaaacg ccgttaatgt cgcgaccgcg acgacgagga cgactcatta gtcctccttg
    25501 ctgtcgtccg ggttaacacg acgttcttcg tcatgtttga ccacgctggt caccaggttt
    25561 gacatgcgca tcccttcaac cagagagttg tcgtagaaga aggtcagttc cggcacgata
    25621 cgcaggcgca tcgctttccc cagcaggctg cggatgaaac cagaagcttc ttgcaacgct
    25681 ttgatgcccg ctttaaccgc gtcttcatct ttgtcgttga ggaacgtcac atatactttg
    25741 gcatacgcca ggtcgcgaga catttcgaca ccggaaacgg tggtcatcat gcccaggcga
    25801 ggatctttaa tttcacgctg caggatgaga gcgatctctt tttgcatttc ctgcgctacg
    25861 cgctgcgggc gaccaaattc tttcgccata ataaattctc ctgacaaaaa aggggctgtt
    25921 agcccctttt taaaattaat ttcaggtgga agggctgttc acgttggcct gataagacgc
    25981 gccagcgtca catcaggcaa tccatgccgg atgcggcata aacgccttat cccgcatgga
    26041 accctaaaaa ccttaagcga tggtacgttg gatctcgatg atttcgaata cttcgatcac
    26101 atcgccagtg cggacgtcgt tgtagttctt aacgccgata ccacattcca taccgttacg
    26161 gacttcgtta acgtcatctt tgaagcggcg cagggactcc agctcgcctt cgtagataac
    26221 cacgttgtca cgcagaacgc ggatcgggtt gtgacgttta accacacctt cggtaaccat
    26281 acagcctgcg atggcaccaa atttcggcga tttgaacacg tcacgaactt ccgccagacc
    26341 gataatctgc tgtttcagtt ccggagacag cataccgctc atcgccgctt tcacttcgtc
    26401 aatcaggtta tagatgacgg agtagtaacg cagatccagg ctttccgctt caatcacttt
    26461 acgtgcagag gcatcagcac gtacgttgaa gccaaccagg atggcgttgg acgccgcagc
    26521 cagggtggcg tcggtttcgg tgataccacc tacgccagaa ccgatgatct tcactttaac
    26581 ttcgtcagta gacagtttca gcaaggagtc ggagatcgct tccacagaac cctgtacgtc
    26641 tgccttcagg acgatgttca cttcgtgaac ttcgccttcg gtcatgttgg cgaacatgtt
    26701 ctcgagttta gatttctgct gacgcgccag tttaacttcg cggaatttac cctgacgata
    26761 cagtgcaact tcacgcgctt tcttctcgtc acgtacaacg gtaacttcat cacccgcagc
    26821 cggtacgccg gacaggccga ggatttccac cggaatggac ggacccgctt ccagcacttc
    26881 ctgacccagt tcgttacgca tcgcacgaac acgaccgtat tcgaagccac acagaacgat
    26941 atcgcccttg tgcagagtac cttcacgtac cagaacggta gcaaccggac cacgaccttt
    27001 atcgaggaag gattcgataa ccgcaccgct cgccatacct ttacgtaccg ctttcagctc
    27061 cagaacttcc gcctgcagca ggatagcgtc cagcagttca tcgatgccgg tacccgcttt
    27121 cgcagatacg tgtacgaact ggctttcacc gccccactct tccggcagga tgccatactg
    27181 ggagagttcg ttcttaacac gatccggatc ggcttctggt ttatcaatct tgttcactgc
    27241 aaccaccacc ggtacctgcg ccgctttcgc gtgctggatt gcttcgatgg tctgcggcat
    27301 cacgccgtcg tcggcagcaa caaccaggac tacgatgtcc gttgcctgcg caccacgtgc
    27361 acgcattgaa gtaaacgcgg cgtgccccgg ggtgtccagg aaggtgatca tgccgttttc
    27421 agtttcaacg tggtatgcac caatgtgctg ggtaatgccg cccgcttcgc cagaggcaac
    27481 tttcgttgaa cgaatgtagt ccagcagaga ggttttaccg tggtcaacgt gacccatgat
    27541 ggtcacaacc ggcgcgcgcg gttcagccgc agcacccgtg tcacggtcgc tcattaccgc
    27601 ctcttccagc tcgttttcac gacgcaggat aactttgtgg cccatctctt cagcaaccag
    27661 ctgtgcggtt tcctgatcga taacctggtt gatggttgcc attgcgccca gtttcatcat
    27721 cgctttgatg acctgagagc ctttaaccgc catcttgttc gccagttcgc caacggtgat
    27781 agtttcgccg atcacaacgt cacggttaac ggcctgagca ggcttctgga agccttgctg
    27841 cagggaagaa cctttacgtt ttccgccttt accgccacgt actgctgcgc gtgcttcttc
    27901 acgatcagct tttgattcag cgtgtttgtt acctttcttc ggacgcgctg ctttcgcgtt
    27961 acgaccacgg ccacggccgc cttcgacttc acgatcgctt tcgtcttcgg cctggcgagc
    28021 atgttgagaa gtagtgacgt gataatcgct ggaatcttca gtcggttccg cgttatcagt
    28081 ccatttgttt tcttccgcca tacgacgtgc ttcttcagca acgcgacgtg cttcttcttc
    28141 gagtttacga cgcgcttctt cttcagcttt acgcttgagc tctgcagctt cctgctcacg
    28201 gcgggctttt tcagcctggg cgtttttagt catatcgtct tgttgattgc tcactttgtc
    28261 tttttccgca gcttcacgtt tcgcttgttc agcagcttca cgcttagctt gttctgcggc
    28321 ctcacgttca gctttttgtt gcgcctcgcg tttagccgat tcttctgcct cacgacgggc
    28381 ttgctcttcc gcttcacgct gcgcttgctc ttccgctgca aggcgttcag cctcttgcgg
    28441 atcgcgtttc acaaaggtgc gtttcttgcg gacttcgatt tgtaccgatt tgctttttcc
    28501 accggtacca ggaatgttaa gggtgctgcg tgttttacgc tgcagcgtca atttgtccgg
    28561 gcctgaattt ttctgattca ggtggtcaat caaagtctgt ttctcttgtg cagacacaga
    28621 gtcgtcagca gacttccgga tacctgcatc agcaaattgc tgtaccaggc gttccacgga
    28681 ggtctgtcgc tctgcggcca gcgttttaat cgttacatct gtcatgctgt tccttcctgc
    28741 tacagtttat tacgcttcgt caccgaacca gcaaatatta cgggcagcca taatcagtgc
    28801 tccggctttt tcgtcggtca acccttcgat atcagccaga tcatcaatgc cctgttcggc
    28861 gagatcttcc agcgtacaaa cgccacgggc ggccagtttg aatgccaaat cacgatctac
    28921 cccttcaagg ttcagcagat cgtcagccgg tttgttatca ccgaggcttt cttcctgggc
    28981 ctgtgcaatg gtggccagtg catttttagc acgctcgcgc agtgcttcaa cggtcggctc
    29041 atcaaggcct tcgatttcca acagctcttt catcggcaca taggccagtt cttccagcgt
    29101 cgagaagcct tcttctacca gaacagtcgc gaagtcttcg tcgatgtcga gatatttggt
    29161 gaaggtgtcg atcgctgcgt gcgcttccgc ctgatgctta gcctgcaggt cgtcaacggt
    29221 catcacgttg agttcccaac cgctcagctg cgaagccaga cgcacgttct gaccgttacg
    29281 gccaatcgcc tgcgccaggt taccggcttc aacggcgata tccatggtgt gtttatcttc
    29341 atccaccacg atagaagcaa cgtctgccgg tgccattgcg ttaatcacaa actgcgccgg
    29401 gttatcatcc cacaggacga tatcgatacg ctcgccgccc agttcagtag aaaccgcctg
    29461 aacacgcgcg ccacgcatac ctacacaggc acctaccgga tcgatacgtt tatcgttggt
    29521 tttcaccgcg attttcgcac gagaacccgg atcgcgagcc gctgctttaa tttcaatcac
    29581 ttcttcgccg atttctggca cttcaatacg gaacagttcg atcagcattt ccggcttgga
    29641 acgagtgacg aacagttgcg cgccacgcgc ttccgggcga acggaataga gcacgccacg
    29701 aacgcggtcg ccagggcgga agttttcacg cggcagcata tcttcgcgca ggatcacggc
    29761 ttcagcattg ttgcccagat ccagagagat gttgtcgcgg tttacttttt tcaccacgcc
    29821 ggtgatgatt tcaccttcgt gttcacggaa ctgatcaacc accatcgcac gttcggcttc
    29881 acgcactttc tgcacgataa cctgttttgc cgtctgggta gtgatacggt caaaggtaac
    29941 agactcaatc tgatcttcaa cgtaatcgcc caggttcagg ctttcatctt cataacgtgc
    30001 ggcttcaagg gtgatttcct tggtcggctg ggtgacttca tcaacaacta accagcgacg
    30061 gaaggtgtca aaatcaccgc ttttgcgatc gatctgtacg cggacgtcga tctcttgttc
    30121 atattttttc tttgttgctg tcgccagcgc gctttccaat gcttcgaaaa tcttctcgcg
    30181 aggtagcgcc ttttcattgg atacggcttc aactacagcc aaaatttctt tgttcatcgc
    30241 gggcttttca cctcatccag actattaaaa gtggggaacc aggttcgcct tctggatatt
    30301 actcagcgcg aacacttcat ctttaccttc gacggtaact gtgatcattt caccgtctac
    30361 cgctttgata acgccctgcc atttacgacg gttttgtacc gccatacgga gaaccagagt
    30421 cacctcttct ccgacaaaac gggcgtagtg ttcagccgtg aacagtgggc gatcgagacc
    30481 cggtgaggag acttccaggt tataagcaac ggtgatggga tcttcaacat ccagcacagc
    30541 acttacctgg tggctcacat cagcacaatc atcaacattg atgccatctt cactatcaat
    30601 atagatgcgc agtgtggatg tgcgaccgcg aataaattcg atgccaacca gttcaaaacc
    30661 cagggcctca actggcgcag taatcatctc tgttaatttt tgctctaatg tggacaagcc
    30721 cacccccaag acataaaaaa agggcctaaa gcccagttat tctgtagtca gataacaaaa
    30781 aaccccgata aatcggggct ttatataact gaaccctata accgcaactg cggtctggag
    30841 cactttccag aaggattttt tcaaatccca ctacgaaggc cgaagtcttc acagtatatt
    30901 tgaaaaagga ctctaaggga aagtggttgc gggggccgga tttgaaccga cgaccttcgg
    30961 gttatgagcc cgacgagcta ccaggctgct ccaccccgcg cctgaaacgt ggcaaattct
    31021 actcgttttg ggtaaaaaat gcaaatactg ctgggatttg gtgtaccgag acgggacgta
    31081 aaatctgcag gcattatagt gatccacgcc acattttgtc aacgtttatt gctaatcatg
    31141 tgaatgaata tccagttcac tttcatttgt tgaatacttt tgccttctcc tgctccccct
    31201 taagcgcatt attttacaaa aaacacacta aactcttcct gtctccgata aaagatgatt
    31261 aaatgaaaac tcatttattt tgcataaaaa ttcagtgaga gcggaaatcc aggctcatca
    31321 tcagttaatt aagcagggtg ttattttatg acgacgattc tcaagcatct cccggtaggt
    31381 caacgtattg gtatcgcttt ttccggcggt ctggacacca gtgccgcact gctgtggatg
    31441 cgacaaaagg gagcggttcc ttatgcatat actgcaaacc tgggccagcc agacgaagag
    31501 gattatgatg cgatccctcg tcgtgccatg gaatacggcg cggagaacgc acgtctgatc
    31561 gactgccgca aacaactggt ggccgaaggt attgccgcta ttcagtgtgg cgcatttcat
    31621 aacaccaccg gcggcctgac ctatttcaac acgacgccgc tgggccgcgc cgtgactggt
    31681 accatgctgg ttgctgcgat gaaagaagat ggcgtgaata tctggggtga cggtagcacc
    31741 tataaaggaa acgatatcga acgtttctat cgttatggtc tgctgaccaa tgctgaactg
    31801 cagatttaca aaccgtggct tgatactgac tttattgatg aactgggcgg ccgtcatgag
    31861 atgtctgaat ttatgattgc ctgcggtttc gactacaaaa tgtctgtcga aaaagcctac
    31921 tccacagact ccaacatgct tggtgcaacg cacgaagcga aggatctgga atacctcaac
    31981 tccagcgtca aaatcgtcaa cccaattatg ggcgtgaaat tctgggatga gagcgtgaag
    32041 atcccggcag aagaagtcac agtacgcttt gagcaaggtc atccggtagc gctgaacggt
    32101 aaaaccttta gcgacgacgt agaaatgatg ctggaagcta accgcatcgg cggtcgtcac
    32161 ggcctgggca tgagcgacca gattgaaaac cgtatcatcg aagcgaaaag ccgtggtatt
    32221 tacgaggctc cggggatggc actgctacat atcgcttatg aacgtctgtt gaccggtatt
    32281 cacaacgaag acaccattga gcagtatcat gcacatggtc gtcagttggg ccgtctgctg
    32341 taccaggggc gttggtttga ctcccaggcg ctgatgctgc gtgactctct gcaacgctgg
    32401 gttgccagcc agatcactgg tgaagttacc ctggagctgc gccgtgggaa cgattattca
    32461 atcctgaata ccgtctcaga gaacctgacc tacaagccag aacgtctgac gatggaaaaa
    32521 ggcgactcgg tgttctcgcc agatgatcgt attggtcaat tgaccatgcg caacctggat
    32581 atcaccgata cccgcgagaa acttttcggt tatgccaaaa ctggcctgct ctcctcctct
    32641 gccacttcag gcgtgccgca ggtggagaat ctggaaaaca aaggccagta attcgacatc
    32701 aaccctgccc ttcaggggtg gggttacctt gcttatcctc tgtaaactcc tttctgagca
    32761 tcacataatc gaaaacatca tggtttgcat ccacaacccg tgagtctcct ttatagtgtg
    32821 caatcacttc ctcaagcgtt tgcggctgtt ccggctttgt tacccccatc cacgcattaa
    32881 taaggtaatt attgtaagct gtcgaaaaga tgtcgttttc cgttgtgcga tccacgccat
    32941 ccccaagaac ggggctatac cagataaaca tcgggacatg atatgcctgc tggctagcct
    33001 ccctgcctcc atgaaaatag acgttcttct tcgtagggtc acgttccagg ccgtggtcgg
    33061 caaaatacat gaccgaggcg cggcggtctt ttaataattc aaaaacctga cctagcaaac
    33121 tatctgtgta atgaatggag ttgtcatagc aggcatcctg atcgtcctgc ggttgaaaca
    33181 cggcgctgga ttgcggatag gcgctacaag ccggttcatg gcttccattt aaatgaagaa
    33241 caatcagttt cttttgctgc gtattttgct gtaatgcttg cgataaatgc ggcaacaaca
    33301 attcatcaaa tcctctgaca taaactgttt ccatggcgcg catggcgata ctggtaactg
    33361 ctgtaccatt ctgccgaaaa gcggattgcg agcttagcca gaaagtctga aatcctgctt
    33421 gattagccat attaataatg ttgtcggggt aattatgaat gtcatgactc aaaacagaat
    33481 cagcagttaa agaaagggga accgacagcg cagtgtatgg tgcgccgctt attgcttgat
    33541 taaacagttt gatctgtttt ctttgtgctt caacttgcgg tgtcgtagag cgtgtatatc
    33601 catacaaaga catattgtcg acacgtacag actcccccac aatcaacacg taggtatcaa
    33661 tacctgtatc cctgactgat aattgaaaat acggcaccgt gtttgcaatt gagagtaatc
    33721 tttgatgctc tttcgctgct aaagcaaaat agttgagatt gaaaaacggc gtataggtag
    33781 caaatcgcga cgctagtata tatggactga acgctttttt attttttgca tctttataag
    33841 caaattgaca agcggaaaat aaactgcccg aaatgacaat cagcaataat attcctgtca
    33901 ctttttttgt cggcaaggaa acatcatatt ttattattac tgcaaaaaaa agaagggata
    33961 aaaaagcaaa agcacataga taagggatat acatccccag cattttgaca acttcatccg
    34021 gatcactctg cagcacacta atcgcaaatc catcattgaa agttgtacca aaggtacacc
    34081 atgaatagag gctaatactc atgtctgccg cagtcagtaa cacaaatggt gcggcaacaa
    34141 gcaggcgaag cggaagggat gatatacgtt taacaaccag gatggtcaga acgaagaaca
    34201 gcaagcgctg aaccatatgc gctccggaag aagcgactaa gttcgtaata ccaaaaagaa
    34261 taacacaaag atacaacaac caatgagatt taaaacttct agcaaatttg ttgaatactg
    34321 tcatccagaa atccaagttc acaaccaata taaacaatta tcaacaatgt tcaattttat
    34381 atcagacatg tttttcaact ctgatccata tcagaacgaa acactgttag ttttttcttt
    34441 ttaaatgatg cggccattgc gttctcagta attaaataac attatcaatg cgtctctaaa
    34501 cattacgcag aacgtagcca tcagtcgtta tactgacagg agcaggatgg tttatcgaga
    34561 agtaaacata tccgtattcg taccggaact ggagttgaca caataaagtg ccaattatgt
    34621 cagcagaagg gaaaaattta taactaaggc gtaccggcac catcgtttca aggtaccagc
    34681 tacgagtaaa gcaactggac gagatacaga tacctgacaa ccattcctca gaccaggacc
    34741 aaaacgaaaa aagacgcttt tcagcgtctc ttttctggaa tttggtaccg aggacgggac
    34801 ttgaacccgt aagccctatt gggcactacc acctcaaggt agcgtgtcta ccaattccac
    34861 cacctcggca cggatactac tttttagttc gggatatcgc tggtcggctt agccggagca
    34921 gctggctgag tttgttcggt tttcgccggc gcactcaggt tttcccattc gctaccttta
    34981 ttggttttgt tgctattgat gttacccagc accagactga tgatgaagaa taacgttgcc
    35041 agcaacgccg tcatgcgggt catgaagtta ccagaaccac ttgaaccaaa cagcgtagcg
    35101 gaagcgcctg ctccgaagga ggctcccata tcagcgcctt taccttgctg cagcatgatc
    35161 agaccaacaa ggccaattgc cacaataagg aaaactacta aaagagcttc gtacataatc
    35221 aacctgttcc ttgcggagtt gccgcgtacc aatgcttcaa ccaataaagc gggagttttt
    35281 aatctttccc actgaagcgg gtgtgaatac taaccaaagc gaatgacctt cgcaagggca
    35341 attttatcgc attgtatcaa ctgcggaaaa aaacagcaaa accgatgtgt tcgctgagaa
    35401 aaaaggcgac aatcgccgcc tttttagcca gttatctaac gctttaaacg gcttttactg
    35461 catcggcgat gcggtgtgca aattcagtca cctgcgcttc gtcttcgcct tccaccatca
    35521 cgcgaattaa cggttcggtg ccggatttac gcagcaacac gcgtccacgg ttgcccagcg
    35581 cagcttcaac ctctgcggtc acggctttaa ctgactcatg ctcaagtgga tcgccgctac
    35641 ctgcggtgta acgtacgtta accagaatct gcgggaacat tttcatgccg ctgcaaaggt
    35701 cgtgcaggct catatggtta cgtgccatcg ccgccagcac ctgcaagcca gcaacgatgc
    35761 cgtcaccggt agtagtttta tccagcagga tcacatgacc ggaattctct gcaccgatac
    35821 gccagccttt ctcctgcatt ttttccagta cgtagcggtc acccactttc gcgcgcgcaa
    35881 atggaattcc taactgtttc agcgccagtt caagccccat gttgctcatc aatgtaccca
    35941 cagcgccacc acgcagctgg ccctgacgaa gaccttcacg cgcgatgata tacatgatct
    36001 gatcgccatc gactttattg ccttcatggt caaccataat cacgcgatcg ccatcgccgt
    36061 cgaaggcaat accgagatcc gctttttcag ccagcacacg agcctggagc gcgcgaacgt
    36121 cggtagcccc cacttcggca ttgatgttta caccgtttgg ctcacaaccg atagcgataa
    36181 cgttcgcccc cagttcgcgc agcacgttcg gcgcgatgtg ataagtcgca ccgtttgcac
    36241 aatccaccac aatcttcagt tcactgaggc taagttcgtt cgggaacgtg gctttgcaaa
    36301 actcgatata gcgacccgcg gcatcaacga tacggctggc tttacccagt tctgccgaat
    36361 caacgcagct gatctccttt tccatttccg cttcgatggc ctcttctacc gcatccggca
    36421 gtttggtgcc gtcgatagag aagaatttaa tgccattatc gtagaacggg ttatgcgatg
    36481 cagatatcac aattccggcc tctgcgcgga aggtacgcgt cagataagcc acggccggtg
    36541 ttggcatcgg gccagtgaag agtgcggaaa ggcccgctgc cgccagaccc gcttccagtg
    36601 ctgactccag catatagcca gaaatacgcg tgtctttacc aataataatc ttacgggagc
    36661 cgtggcgcgc cagcacttta cccgcggccc aacccagctt aagcacaaaa tcaggtgtga
    36721 tcggcgcatc ccctacacga ccacgaatcc catcggtacc gaaatattta cgattactca
    36781 tagcgtttgt tttcctttgc agacagagtg gcttccacca cccgcatcgc ttctacggtt
    36841 tctttgacgt catgaacacg aatgatgtgc gcgccttgca ttgcggcaat gaccgcacag
    36901 gccagactac cgctcaggcg ctcggacggc cccacgttca gcagctgccc aatcatcgat
    36961 tttcgtgaca tacccaccaa cagcggcagg ttgaaatggt gaaattcagc caggcgcgcc
    37021 agtaatgaat agttatggga gagattttta ccgaaaccga atccggggtc gagcaacaat
    37081 ttctcttttg cgatacccgc ctgctcgcaa cgtgctattt gctcaataaa gtagcgattc
    37141 acttctgcaa agacatcgtc atacttcgga gcttcctgca tggtttttgg atttccctgc
    37201 atatgcatca gacaaaccgg taaaccggtt tctgcagccg cctccagagc gccaggttcg
    37261 gaaagggagc ggatatcatt aataatgtga gcgccaactt tcgctgactc acggatgact
    37321 tctggtttgg atgtatcgac cgagatccag acttcgaagc gttgagcaat tgcctcaacc
    37381 acaggaataa cacgttgcaa ctcttcttca acgctaactt ccgccgcccc tgggcgcgtg
    37441 gactcgccac caacgtcaat gatcgtcgcg ccagcattga tcatcagatt cgcatgtttc
    37501 accgcatcta tcagcgagtt atgcgtgcca ccatccgaaa aggaatcagg cgtgacgttg
    37561 aggatcccca ttacgtgagg atggctaagg tccagtgaag taccctgggc aaagagtttc
    37621 atgatgttat ccctggtatg aattgataag aaaaaacccc ggagcacgcc ccggggtttt
    37681 cggtacaaat acagtcatct gatgcgggaa cttacttgtc gcctaactgc tctgacatgg
    37741 tgttacccgg gttcggcgta cgcggttcat caaccggacg aggagccttt ggactaccat
    37801 tgtcgccaga attgttagaa gcgcctggtt cttcccagcc cgctggcgga cgtacatcgc
    37861 gacgtgccat caggtcatca atctgcggtg cgtcgatagt ctcatatttc atgagagcat
    37921 ctttcatcgc atgcagaata tccatattgt cggtcagaag ctgacgcgca cgattatagt
    37981 tacgctcaat cagtgctttc acttcctggt cgatgatacg tgcagtttca tcggacatat
    38041 gtttcgcttt cgctacgcta cggccgagga atacttcacc ttcttcttcc gcgtacagca
    38101 gtggacccaa tttctcagag aagccccact gggtcaccat gttacgtgcc agattggtcg
    38161 caactttaat atcgttggac gcaccggtag aaacatgttc cggcccatag atgatctctt
    38221 ctgccagacg accaccgtac agcgtagaaa tctggctttc cagtttctga cggctggcgc
    38281 tgattgcgtc gccctcaggc aagaagaaag tcacacccag cgcacgaccg cgtgggataa
    38341 tcgtcacttt gtgcaccgga tcgtgttccg gcaccaggcg accgataatc gcatgacccg
    38401 cttcgtggta agccgttgat tctttctgcg cttccgtcat caccatggag cgacgttccg
    38461 cacccatcat gattttgtct ttcgctttct cgaactcaac catcgacaca acgcgtttgt
    38521 tgccacgagc agcgaacagt gccgcttcgt tcaccaggtt cgccaggtca gcaccggaga
    38581 aaccaggagt accacgggca atgattgccg cgtcgatatc gggggccaat ggtacgcgac
    38641 gcatgtgaac tttcaggatc tgctcacgac cgcgaacatc tggcaagccg accacaacct
    38701 gacggtcgaa acggccagga cgcagcaggg ccgggtcgag aacgtccgga cggttagtcg
    38761 cggcgataac gatgatacct tcgttacctt cgaagccatc catctcaacc agcatctggt
    38821 tcagagtctg ttcacgttca tcgtgaccac cgcccagacc agcgccacgc tggcggccta
    38881 cggcgtcgat ttcatcgata aagatgatgc acggtgccgc tttcttcgcc tgttcgaaca
    38941 tgtcacgaac acgggatgca cccacaccga cgaacatttc tacgaagtca gaaccggaga
    39001 tagtaaagaa cggaactttc gcttcgcctg caatcgcttt cgccagcaac gttttaccgg
    39061 tacccggagg accgaccatc aggacgcctt tcgggatctt accgccgagt ttctggaagc
    39121 ggctcggctc gcgcagatac tctaccagtt cagcaacttc ttcttttgct tcgtcgcagc
    39181 ccgcaacgtc agcaaaggtc gttttgatct gatcttccgt cagcatgcgc gctttgctct
    39241 taccaaacga catggcacct ttgccaccgc cgccctgcat ttgacgcatg aagaagatcc
    39301 agacaccaat cagcaacagc atcgggaacc aggagatgaa gatagaagcc agcaggcttg
    39361 gttcttcagg cggttcaccg acaaccttga cgttcttggt caacaggtta tccagtaatt
    39421 tcggatcctg aaccggaatg taagtggtat aacggttact atctttcttg gtaacgttga
    39481 tttcacgtcc gttgatacgc gcttcacgaa cctggtcgtt attgacctct tgtaggaagg
    39541 tagagtaatc caccttacgg ccattagact cgctgggccc aaagctctgg aatactgaca
    39601 tcagcacaac ggcaatgacc agccagagta ttaggttttt cgccatgtca ctcaagggat
    39661 taacctctta ttacaactgt gttaaaaaca gcgtcaggat actctatatc cagcatcttt
    39721 caaactttcg tctgaaatct cccggttagg gtttacgccc ggtcgctaca atatacactt
    39781 cccgcgaacg tgcacgagaa gagtccggct tacgaacttt gaccttcgta aacagggagc
    39841 gaatttccct tagatactca tcgaaacctt cgccctggaa caccttcact acaaaactgc
    39901 cacctggcgc taatacatca cgacacattt ctaacgccag ttccaccaga tacatggcac
    39961 gggggatatc caccgccggt gttccgctca tgtttggtgc catatcggac atgacaacct
    40021 ggactttgct gtcgccaacg cgctccagca gtgctttcat caccagttca tcacgaaaat
    40081 cgccctgaag aaagtccaca ccaacgatag gatccatagg taaaagatcg caagcgatga
    40141 tgcggccttt gccgccaatt tgggtgacca catattgtga ccaaccaccc ggagcagcac
    40201 caaggtcgac aaccgtcatt cccggtttaa agagtttgtc actttgctgt atttcatcaa
    40261 gtttaaacca ggcacgggaa cgtaacccct ttttctgtgc ctgttgaaca tatttatcgc
    40321 taaagtgttc ctgaagccag cggctggagc tggcagaacg cttcttacct gtcatttaac
    40381 tttcccatgg ggataactca tcgtaaccaa ttgcgtaaat ttttacgcgc ctatttggtg
    40441 atatatggga gatggcggta gaatgacccg ttttcaatcc caacgtaagc aaaaaatacg
    40501 atgaatctga gtactaaaca aaaacagcac ctgaaaggtc tggcacatcc gctcaagcca
    40561 gttgttctgc ttggcagtaa tggtttgacc gaaggggtgc tggccgagat tgaacaagcg
    40621 ttagagcacc atgaactcat caaggtgaaa atcgccaccg aagatcgcga aactaaaacc
    40681 ttgatcgtgg aagctatcgt gcgcgaaacc ggcgcctgta atgtacaggt catcggtaaa
    40741 acgctggtgc tttatcgccc aactaaagaa cgtaaaatct cgctgccacg ctaagattat
    40801 cctaaagtta cacacatttg ctgtgtaaaa cgaggggttt tccgcaggca ggagagcaaa
    40861 atgccacgct ctgttcgttg ataaaaggcc gcatagcggc ctttttcctt tctttacaat
    40921 acatcaacat cttgagtatt gggtaattct tacaggtatt ccaccttaat tacttcaaat
    40981 tctacttcgc cgcccggcgt tttgatgacc acaacatcat cttcttcttt gccgatcagg
    41041 ccacgagcaa taggcgagtt tacagaaatc aggttttgtt taaagtcagc ttcgtcatcg
    41101 ccaacgatgc gataagtctg ttcttcgtca gaatccagat tcagcaccgt tacggtagca
    41161 ccaaaaataa cgcgcccatt gttgggcatt ttggtgacat caatcacctg cgcgttcgac
    41221 agcttggctt cgatgtcttt aatacggcct tcgcagaaac cctgctgttc acgagctgcg
    41281 tggtattcgg cgttttcttt caggtcgcca tgctcacgcg cttccgcgat agcagcaatg
    41341 atttcaggac ggcgcacaga tttcagaaaa tccagctctt cgcgtaattt ttcagcgccg
    41401 cgtaaggtca tcggaatagc ttgcatttgt tatacctctt gaatattcct gatggggcaa
    41461 gtcttcaccc accccggctg ttcggcctgc ccggcataac tcctcaccgg gaccagaagc
    41521 aaaaaaatac cgacccgggt acaagtccca ggtcagctac aattcacatt ttgatagtca
    41581 ttttaccctg aagttcccga agggtcatcg tttactttat agggcgttgc gccgtagtat
    41641 gacggctcga ttccaggttg ttagcgcgag attatgcgat tttccagatt tatcatcgga
    41701 ttgaccagct gtatagcgtt cagtgttcag gccgcgaatg ttgatgagta cgttactcaa
    41761 ctccccgctg gtgccaacct tgccctgatg gtgcaaaaag tcggcgcgtc ggcccccgct
    41821 attgattacc acagtcagca gatggcgctg cccgccagta cgcagaaagt gattactgcg
    41881 ctggcggcgt tgattcaact cggccccgat tttcgtttca ccacgacgct tgaaaccaaa
    41941 ggcaatgtgg aaaacggcgt acttaagggt gacttagtgg cgcgatttgg tgccgatccg
    42001 acgttaaaac gtcaggatat tcgcaatatg gtcgcgactt tgaaaaaatc tggcgtcaac
    42061 caaatcgatg gcaatgtgtt gatagatacc tccattttcg ccagccacga taaagccccc
    42121 ggctggccat ggaatgacat gacacaatgc tttagcgctc cgcctgccgc tgccatagtt
    42181 gaccgcaact gtttctccgt ctcgctctac agtgccccaa aacctggtga tatggctttt
    42241 atacgcgtgg catcttatta ccccgttacg atgttcagcc aggtacgcac cctcccccga
    42301 ggttctgccg aagcgcaata ctgcgaactg gatgtcgtac caggcgacct gaaccgcttt
    42361 acgctgacgg gatgcctgcc acaacgttct gagccgctcc cgttggcttt tgccgtgcag
    42421 gatggagcca gctatgccgg ggcaattctg aaagatgagt taaaacaggc aggtatcacc
    42481 tggagcggaa cactgctgcg ccagactcag gttaacgaac ctggaacggt agttgccagt
    42541 aaacagtcgg ccccgttgca cgatctgctt aagattatgc tgaaaaagtc ggacaacatg
    42601 atcgccgata cggttttccg catgataggc catgcgcgct tcaatgtgcc tggaacatgg
    42661 cgggccgggt cggacgccgt gcgtcagatc ctgcgccagc aagccggtgt cgatattgga
    42721 aacaccatta ttgccgatgg ttcagggctt tcgcggcata acctgattgc ccccgccacc
    42781 atgatgcagg tgctgcaata cattgcccaa cacgacaatg aacttaactt tatctccatg
    42841 ctgccgcttg cgggctatga cggctctttg cagtaccgtg caggtctgca tcaggcgggc
    42901 gtggatggaa aagtctcagc gaaaaccggt tcgttgcagg gggtatataa cctggcggga
    42961 ttcattacca cagcgagcgg gcaacgaatg gcgtttgtac aatatctttc tggctatgca
    43021 gtagaaccgg cggatcagcg taatcgccgt attccgttag tgcgttttga aagccgtttg
    43081 tataaagata tttatcagaa caattagtca aaaagaaacc ccggcacatg gccggggttt
    43141 tgctgattaa cgcttgtaaa tgaactcaac gccttcttcg tcgtcttcgt cccagtcatc
    43201 atcccagtcc tcatcatcct cttcagcaat ctcttcaagc tgctggcgat gataatcatc
    43261 ccacatgaat tcgactttct ctggctgttt cgcttcttca gcctgcacga ccgggttttc
    43321 aatgataaag gtcatcacat cccagcagag atctttcacg cccagtccac tcgccgcaga
    43381 gatcagataa tatttatctt cccagcccag cgcttcagca atcgctttgg ctttctcttc
    43441 agcttctgcc ttatccagca gatcgatctt attgaacact aaccaacgtg gtttcgccgc
    43501 cagatcctgg ctgtattttt ccagctcgct gataataata cgcgcgtttt caaccggatc
    43561 ggtgccgtca atcggatcga tatcgatgag gtgcaacagg acgcggcaac gttccaggtg
    43621 cttcaggaag cgaatgccca gacctgcgcc ttccgcagcg ccttcaatca gtcctggaat
    43681 atcggcaaca acgaagctct tttcgttgtc cattcgtacc acacccagac ttggcaccag
    43741 agtggtaaac ggataatccg ccactttcgg tttagccgcc gataccgcac gaataaaggt
    43801 cgatttaccc gcgtttggca tccccaacat accgacgtca gccagcagca tcagctccag
    43861 cagcagctca cgcttatcgc ccggcgtacc gttagttttc tgccgtggtg tacggttaac
    43921 tgacgatttg aaacgggtat tgcccagacc gtgccagccg cccttagcaa ccagcagacg
    43981 ctgaccgtgt ttggtcatat cgcccatggt ttcaccagta ccctggtcga ttacacgcgt
    44041 acctaccggc actttaattg tgacgtcttt accgcgctta ccggtacagt cgcggcttgc
    44101 gccattctga ccgcgctctg cacggaaaga tttttcaaaa cgataatcga taagcgtgtt
    44161 caggttctcg tcggcttcca tccatacgtc accaccatca ccgccgtcgc cgccatccgg
    44221 gccgcctttc ggaatatact tttcgcggcg gaagctcacg caaccattac cgccatcacc
    44281 tgcaacgacc agaatcgatg cttcatcaac aaacttcatt ttattctccg taaatcattc
    44341 gcctgcgcgg ggttgcgata ccaccgttgt atgcttacgt aatccgcccc aaatacgatg
    44401 accaatggcg gaatacatcg cgcccgcaac cacgacaaac gcaccgagat aacctaaaag
    44461 gtttaacatc ggtctggcga agaaatcggg ccaggccagt gataaaagat ctgaaaaaaa
    44521 cagcgtaaac agtggggtga gcgtgatgat cgcgctcacc tgcgctgcct gccagcgagc
    44581 catcgcttcc gccagggcgc catatcctac caatgtattc agtccgcaaa aaattaaaca
    44641 tgcgagctgc cagtggctaa gctgcgctat cactccaggc tttgccagag ggaagagcgc
    44701 aattgtacat aaagtgtaca gtaaaaacag gatctgcggt gaggccagcc gacgcaataa
    44761 aaccttttgc gccacgccat aactcaccca aaccgtcgcc gcaccgaccc caaagataac
    44821 tccccaggtg taatcggtga gctttgtaaa tatctcgacc agactggtgt taaaaaacat
    44881 caccaggccg ctcaggagca tcaatgcccc tacaacctga gtgctgcgca ttttctcttt
    44941 caggataaat acgctggcaa ccatcatgcc aactggcgag agttgcccaa tcacctgcga
    45001 agcggtcgga ctcaggtatt gcaaggatga gctgaacagg atgaagttcc caaacagccc
    45061 ggcggtcgcc actgccaaca aaatcaacca gcgtggctta cgaaacacgc gtaatggcgg
    45121 caacctcttc ttcaccgcaa gaatggcacc aaggccaata ctcgccatca agaaacggta
    45181 aaacacgatt gtcggaggtt ccatcacctc cagcacctgc ttcattgcga ttggcaacgc
    45241 cccccagcaa attgctgtgg tgagcgccaa aagaatgcca atgcctgcct gctgcttcat
    45301 accgtattcc ctgcaaagcg catttgcgga ttaacgtcgc accatgcgca tttttaccgg
    45361 ttatcgaatg taaaaagccc cgcaacgtgt tgcggggctt tcatccgtta ccgggacgcg
    45421 aaaaacttat tcagcttcga tgctgataaa tttacggttt ttcgggcctt taacttcgaa
    45481 tttcacttta ccgtctgctt tagcaaacag agtgtggtca cgaccgcaac ctacgttagc
    45541 gccagcgtgg aatttggtac cacgttgacg aacgatgatg ctacccgcca gaacggattc
    45601 gccaccgaaa cgcttaacgc ccaggcgttt agcttctgaa tcgcgaccgt tacgtgtgga
    45661 gccgccagcc tttttatgtg ccatttgaaa tctctcctca ggtcttaggc gctgatgcca
    45721 gtaattttca catcagtgaa ccactgacga tggccctgct gcttacgata gtgtttacga
    45781 cgacgaaact taacgatttt aactttctcg ccacgaccgt gagcaacaac ttcagctttg
    45841 attacgccgc catcaacgaa aggaacgccg attttgactt cttcaccgtt tgcgatcatc
    45901 agcacttcag cgaactcaac agtttcgcca gttgcgatgt ccagcttttc caggcgaacg
    45961 gtctgacctt cgcttactcg gtgttgttta ccaccacttt ggaaaaccgc gtacatataa
    46021 aactccgctt ccgcgcacac cttttcaatg attcagagtg cgctataaat attcacaata
    46081 gggcgcgaat attacgcaaa acgcacgcct ttgacaagtg ctacagtcaa tacacgaaga
    46141 aaaaaaacac aacttgtacg gtaacgttta tctgtgccat tttttcagta caatcactct
    46201 atattcctaa ccataaaccc taagttgcct ttgttcacag taaggtaatc ggggcgaaaa
    46261 gcccggcttt tgcgatgaat ttagaaaaaa tcaatgagtt aaccgcgcaa gatatggcgg
    46321 gtgttaatgc ggcaatcctt gagcagctta attccgacgt ccagctgatc aatcagttag
    46381 gctattacat cgtcagcggc ggcggtaaac gtattcgtcc gatgattgct gtactggctg
    46441 cacgagctgt tggctatgag ggaaatgcgc atgtcaccat tgctgccctg atcgagttta
    46501 tccacacggc gactctgctg cacgacgacg ttgtggatga atcagatatg cgcaggggta
    46561 aagctaccgc caacgctgca tttggcaatg ccgccagcgt gctggtaggc gattttattt
    46621 atacccgcgc gttccagatg atgaccagcc tcggttcgct caaagtgctg gaagtcatgt
    46681 cagaagccgt aaacgtcatc gcagaaggtg aagttctgca actgatgaac gttaacgatc
    46741 cggacatcac tgaagaaaac tacatgcgcg ttatctatag caaaaccgcg cgtctgtttg
    46801 aggctgccgc gcagtgttcc gggattctgg ctggctgtac gccggaagag gagaaaggcc
    46861 tgcaggatta tgggcgctat ctcggcactg ctttccagtt gatcgacgat ttactcgatt
    46921 acaatgccga tggcgaacag ttaggtaaaa atgtcggcga cgatctgaac gaaggtaaac
    46981 cgacgctgcc gctgctgcat gcgatgcatc atggcacacc agaacaggca cagatgatcc
    47041 gtaccgccat cgaacagggt aacggtcgcc atcttctgga accggttctg gaagcaatga
    47101 acgcttgtgg atctcttgaa tggacgcgtc agcgtgccga ggaagaagca gacaaagcca
    47161 tcgcagcatt acaggtgctc ccggacaccc cttggcgaga agcactcatc ggcctcgcgc
    47221 acatcgctgt tcaacgcgat cgttaatccc ctcccttcat cccgcgcagt gcgcgggatg
    47281 attccagtaa attccataaa aacactaatt cagcgctata acacctgaaa aaaagggctg
    47341 tgcatcttta tatattctga atattcacac tttttacagg aactttttag agcaataggc
    47401 catcaggagt atagtgatgc ccgacagaag aagtgttctg aatgaaagcg actaacttaa
    47461 ggagtgagga aagatggaaa gtaatttcat tgactggcat cccgctgaca tcattgcggg
    47521 tttgcgcaag aagggaacgt caatggcggc ggagtctcgc agaaatggtt tgagttcctc
    47581 aacgctggca aacgcattat cgcgcccatg gccgaaagga gagatgatta ttgcgaaagc
    47641 cctgggaact gacccctggg ttatctggcc atcacgctac catgatccgc agacccatga
    47701 gtttatcgac agaacgcagt tgatgcgtag ctacactaaa ccgaaaaaat gagtggtctg
    47761 gcggtagccc cgcgaacggg gctgccagct ctcagacgat tactcgcctt tcacacgctc
    47821 aatatttgca cctaaagcgc gcagtttgtc ttcaatgcgt tcgtagccac gatcgatgtg
    47881 ataaatacga tcaaccaccg tcgtcccttc cgcaatacag ccagccagca ccaggcttgc
    47941 tgatgcacgc agatcggttg ccataacctg tgcgccagaa agtttttcaa caccgtgaca
    48001 aataacggta ttgctttcga tttcggcatg cgcgcccata cggctaagct ccggcacatg
    48061 cataaagcgg ttttcaaaga ccgtttcggt gatgaatccg gtcccttctg ccaccaggtt
    48121 caacagcgtg aactgggcct gcatatcggt cgggaatgcc ggatgcggcg cggtacgtac
    48181 gttaacagcc ttcggacgtt tgccatgcat atccaggcta atccagtctt cgccgacttc
    48241 gatgtccgct ccagcgtcac gcagtttcgc cagcacggcg tcgagagtat ctggctgcgc
    48301 gttacggcag ataattttgc cgcgagaaat cgccgccgcc accaggaaag taccggtttc
    48361 gatacgatcc ggtagcacgc gatagacacc gccgcctaaa cgttccacac cttcgatgac
    48421 gatacgatcg gtgccctgac cgctaatttt cgcacccagc gtaatcagga agttcgcggt
    48481 atcgacgatt tccggttcac gcgctgcgtt ttcaataatc gtggtacctt ccgccagggt
    48541 tgcagcacac atgatggtca ccgttgcgcc aacgctgact ttatccatca cgatatgtgc
    48601 gcctttcaga cgaccatcga cggaagcttt aacgtaacct tcttccagtt tgatggtcgc
    48661 gcctaattgt tcgaggccag aaatgtgtag atcaaccgga cgcgcaccga tcgtacaacc
    48721 gccaggcagt gaaacttgcc cctgaccaaa gcgcgctacc agcggcccca gtgcccagat
    48781 agaagcacgc atggttttaa ccagatcgta aggtgcgcag aatacattaa cgtcgcgggc
    48841 atcaatatgc acagaaccat tacgttctac tttcgccccc agctggctta gcagcttcat
    48901 tgatgtatcg acgtctttca gttttgggac gttctggatc tctaccggtt cttccgccag
    48961 tagagcggca aaaaggatag gcagagcagc atttttagcg ccggaaattg tgacttcgcc
    49021 ctggagcttc gttggcccct gaacacgaaa tttatccatt tagtttgttc tcagttaaca
    49081 attcatatcc gctaccggct aatcgcccat agctcaaaag ccgttcagtt tgcgatcgcg
    49141 cgcccactcc gcaggggtat acgctttgat cgacacagca tgaatgcggt tatccgcaat
    49201 atattccatc agcgggccat agaccgtctg ctgtttttta acccgactca tgccgtcaaa
    49261 caactcaccc acggcaataa cctgaaagtg gctgccatcg ccggaaacgt ggacttcctg
    49321 gagggagaga gcgttcatca acacgctctg aatttcatta ttttccatgg gatcttcaat
    49381 catcagttaa taaaccagcg aaacatctta gagcaaagtt gcgctggcat aaataagcaa
    49441 aaagcctcgc tgataaatca gacaaggctc gacttgcagg caggtttgcc ggacaggcgg
    49501 ttaacgccat atccggcctg aaaaaattta acgaggcaga acatcagcag gcaaattata
    49561 caatttcgcg agggtataca ctttgtcgtt taccccctga agcgtcacgt tgttgccctg
    49621 ctttttcgcc agatcgataa gatggagcag cagtgccagt ccacccgtat ccacgcggga
    49681 cacacggcta agatcgatgc aggtaatccc cttcaccgct tcctcacgca tttcccaaag
    49741 cggtagcaga acgtcctgat ccagctctcc ggataacgcc agcgtgtcac ccgtctgcat
    49801 ccagctcagt gactcgctca ttattttttc tcttccagag tgattttctg ttgagaaatc
    49861 gatttcagtt gcgcagtcag gccgtcgata cctttggtac gcagcagcgt tccccactcg
    49921 ttttgtttgg tggtgatcat actgacgcct tcagcaatca tgtcgtaagc ctgccagttt
    49981 cccgtctggg agtttttacg ccactggaag tccagacgca ccggcggacg gccattcggg
    50041 tcaataatgg taacgcgaat aggcacaatg gttttatcgc ccagcggctg ttctggcgca
    50101 atctgatagg tttgaccgtg atacatcgcc agcgcctgac cgtaagcctg cttcaggtac
    50161 tcacggaaag cggcaaagta ggcttcacgt tgagcagggg tcgcactctt gtaatactgg
    50221 cccagcacca gcgcaccggc gtatttcacc tgtacgtatg gcagcagttc ctgatcaaca
    50281 atggtacgca gataatccgg gttggcccga atttgcggtt gctcattctt caggcgatcg
    50341 aacgttttct gcgccgcctc gtccatcagc ttatacggat tggtctggtc tgccgcggtt
    50401 gccgcactca gaggtgcaat caccagcaaa gcgaccatca ttaaacgttt aaacatgcgt
    50461 cggttctcct gaaattattt cgttgtaccc acaggttcag tggtttcatt attacctggc
    50521 gcagcagctg ccgcatcgcc actattctta ttgtcatcgc ctttactacc gtaaaggaac
    50581 tgaccaatga gatcttccag caccatcgca gacttagtgt cctgaattgt atcgccatcc
    50641 ttcaggatag cagtccccag ttccgggtct tcaaaaccga cgtttaatgc cagatattgt
    50701 tcccccagca ggccggaagt acgaatgctc agcgaactgg tatctggaat gtggttataa
    50761 cgttgttcaa tttccagcgt tacgcgcggc agataggttt tcgggtccag cgtaatatcc
    50821 gccacccgac ccacaacaac gccaccaata ctgaccggag agcgcgcttt caggccgcca
    50881 atgttatcga acgtcgcata aagcgtgtag gtcggttcag tacgtatgga cgtcacgttc
    50941 gccgccttca ggcaaacaaa cagcgccgcc agcagtgctg ctaataaaaa gatacccacc
    51001 caaatttcat tttttttcgt ttgcatgaac tcaattccca aacatcaatg cggtcagcac
    51061 aaaatccagc cccagaacag ccagagacga gtggacaacg gtgcgagtgg ttgcccggct
    51121 aatcccggca gacgtcggga tggcgtcgta gccgttaaac aacgaaatcc acgtcaccgt
    51181 gatggcgaac accacgctct taatcagaca gttgaccaga tccatacgcc agtcgacggc
    51241 attttgcatt gccgaccaga agaacccgct atcaatgcct ttccaactga cgccgaccag
    51301 agatccgccc cagatcccca cggcgacgaa aataaccgtc aacagtggta atgaaataac
    51361 cccagcccag aaacggggag aaataacccg acgcagcgga tccaccgcca tcatctccat
    51421 actggagagt tgctctgtag cgcgcatcag gccgatttct gcggttagcg ccgaaccagc
    51481 acgcccggca aacaacaacg cggcaaccac cggccccagt tcacgcagta gcgataacgc
    51541 caccagcata cccagactgg tttccgcact ataagtggtc agaaccagat aaccttgcag
    51601 ccccaacacc attccgatga acacgccaga aaccacaata atcagcatcg acaggacgcc
    51661 gacattatag agctggcgca ccagcagcgg cgcatgtttg cgaaattccg gtttgccgac
    51721 cagcgcattg aataacatta acccggcccg cccgaacgtt ctcagggttt taatcccttt
    51781 atgtccgagc gacgccagcg catttaacag catgagtggc ttaactccct ggtaaaagat
    51841 cagcgtgata atcgccggca ggatagcgga acggaacagg cccgtcagct atcccgtcca
    51901 gaaactgacg tacgcgcgga tcaggattcg cctgcaacgc ctgggcactg ccatgagcga
    51961 caattttttt gtccgccagg atccaggcgt gatccgcaat acttaacact tccggcacat
    52021 cgtgagaaac caccacacaa gtcacgccca gcgcgctgtt cagctcagaa atcagcttca
    52081 ccagtacgcc catggtgatg ggatcttgcc caacaaaagg ttcatcaaac atgatgagat
    52141 ccggctccag cgcaatcgca cgcgccagcg ctgcacgccg cgccatccca ccagaaagtt
    52201 cagaaggcat tagcttagcc gctccacgca gccccacggc ctccagcttc atcatcactg
    52261 tactatgcaa caatggcgcg ggaagttggg tatgttcgcg cagtggatag gcgacgttgt
    52321 caaatacgtt catatcagtg aacaacgccc cggactgaaa taacatgctc atccgtttgc
    52381 gcactgtata caggcgcgaa cgagacatcg ccggaatatt ctcaccatcg aaaaggatct
    52441 caccatgatc tggtgcgatt tgcccgccaa tcagacggag tagcgtcgtt ttaccgatgc
    52501 ccgatggccc catgattgcc gtgatcttcc ctcgcggcac ggtcagggaa atattatcga
    52561 agatgcagcg attgccacgc gtaaaactga catcgcgcat atcgactaaa ttcgccacag
    52621 actgctccat aattcaccct tcgtcttgcg ttgattttct aagcatggcg ctcaatttaa
    52681 ccttgaaccc aacatattta cagaatatta cccgccgtgg ttagcgaaag ctggcatttg
    52741 ttttactttt tagccgcata aagtcaaaat taagaatccg ttacggcttt ctgaaaatct
    52801 tcagcggacc ggcgagtata cctgaagaaa ggatgttaga tgcttttagc tacggcactg
    52861 ttaattgttg gtttactttt ggtcgtttac agtgccgacc gcctggtttt tgccgcgtct
    52921 attctttgcc gaacctttgg catcccgccg ctgatcatcg gcatgacggt ggtcagtatt
    52981 ggtacatcgt taccagaagt catcgtctcg cttgccgcgt ctctgcacga acaacgcgat
    53041 ttagccgttg gtacagccct cggctcaaac attatcaata tattgctgat cctcggtctg
    53101 gctgcgctgg ttcgtccttt taccgtccat tctgatgttc tacgccgtga attaccctta
    53161 atgttgttgg tcagcgtggt ggccggttcc gtactctatg acggacaact tagtcgaagc
    53221 gatggtatct ttctcctctt tctggctgtg ctatggctgc tgttcattgt taaacttgca
    53281 cgtcaggctg aacgtcaggg gactgacagc ctgaccagag agcagcttgc agagctgccg
    53341 cgtgacggcg gattgcccgt cgcgttttta tggctcggca ttgcgcttat catcatgcca
    53401 gtggccacgc ggatggtggt tgataacgcc acggtgctgg cgaattactt tgccatcagc
    53461 gagttgacga tgggtctgac ggcaattgct atcggaacca gcctgccgga actggcaacc
    53521 gcaatagcgg gggttcgcaa aggtgaaaac gacattgctg tcggaaatat cattggcgca
    53581 aacattttta atattgtcat cgtgttgggt ttacccgcgc tgataacgcc aggagagatt
    53641 gatccattgg cgtacagtcg tgactacagc gtgatgttgc tggtgagcat tatttttgcg
    53701 ttgctgtgct ggcggcgctc cccgcaaccg ggccgtggtg taggggtatt attaactggc
    53761 ggatttatcg tatggctggc gatgttgtac tggttatcgc caatactcgt tgaataactg
    53821 gaaacgcatt atgtcgcacg tagagttaca accgggtttt gactttcagc aagcaggtaa
    53881 agaagtcctg gcgattgaac gtgaatgcct ggcggagctt gatcaataca tcaatcagaa
    53941 tttcacgctt gcctgtgaaa agatgttctg gtgtaaaggg aaagttgtcg tcatggggat
    54001 ggggaaatcg gggcacatcg ggcgcaaaat ggccgcaacg tttgccagca ccggtacacc
    54061 ttcatttttc gtccatcctg gtgaagccgc gcatggtgat ttaggcatgg tcaccccaca
    54121 ggatgtggtg attgctatct ctaactcagg tgaatccagc gaaatcacgg ccttaattcc
    54181 agtgcttaag cgtcttcacg taccgttaat ctgcatcacc ggtcgcccgg agagcagcat
    54241 ggcgcgcgcc gcagatgtgc atctgtgtgt taaagtagcg aaagaagcct gtccgttagg
    54301 gctggcaccg accagcagca ccaccgccac gctggttatg ggcgatgccc tcgctgtcgc
    54361 gctgttaaaa gcacgcggct ttactgctga agattttgcg ctctcacacc caggcggcgc
    54421 actgggtcgt aaacttctgc tgcgcgtaaa cgatattatg catacgggcg atgagatccc
    54481 gcatgttaag aaaacggcca gtctgcgtga cgcattgctg gaagttaccc gcaaaaatct
    54541 tggtatgact gtcatttgcg atgacaatat gatgattgaa ggcatcttta ccgacggtga
    54601 tttacgccgt gtcttcgata tgggcgtgga tgttcgtcag ttaagtattg ccgatgtgat
    54661 gacgccgggg ggaatacgtg tgcgccctgg cattctggcc gttgaggcac tgaacttaat
    54721 gcagtcccgc catatcacct ccgtgatggt tgccgatggc gaccatttac tcggtgtgtt
    54781 acatatgcat gatttactgc gtgcaggcgt agtgtaaaga ttcaaggata aacaacaatg
    54841 agcaaagcag gtgcgtcgct tgcgacctgt tacggccctg tcagcgccga cgttatagca
    54901 aaagcagaga acattcgtct gctgatcctc gatgtcgatg gcgtactgtc agatggcctg
    54961 atttatatgg gcaataatgg cgaagagctg aaagcgttca atgttcgtga cggttatggc
    55021 attcgttgtg cgctcacctc tgatattgaa gtcgctatca ttaccgggcg aaaggctaaa
    55081 ctggtagaag atcgttgtgc cacattgggg atcactcact tgtatcaggg gcagtcaaac
    55141 aaactgatcg cctttagcga tttgctggaa aaactggcga ttgccccgga aaatgtggct
    55201 tatgtcggcg atgatctcat cgactggccg gtaatggaaa aagtgggttt aagcgtcgcc
    55261 gtggccgatg cgcatccact gttgatcccg cgcgccgatt acgtgacgcg cattgctggc
    55321 ggtcgtggcg cagtgcgcga agtttgcgac ttattactcc tggcgcaggg caaactggat
    55381 gaagccaaag ggcaatcgat atgagtaaag ccagacgttg ggttatcatt gtgctatcac
    55441 tggcggttct ggtgatgatc ggcattaata tggccgaaaa agacgatacc gcccaggtgg
    55501 tcgtcaacaa caatgatccc acctataaaa gcgagcatac ggacacgctc gtctataacc
    55561 cagaaggggc actaagctat cgattgattg ctcaacacgt tgaatattat tccgatcagg
    55621 ccgtttcgtg gtttacgcag ccggtactta ccacgtttga taaggataaa atcccgacat
    55681 ggtccgtaaa agcagataaa gccaagctga ccaatgaccg gatgctctat ttatatggac
    55741 acgttgaagt caacgcactc gtgccggact ctcaacttcg cagaatcacg acggataacg
    55801 cgcagatcaa tctggtgacg caggatgtta cctctgaaga cctcgtcacg ttatacggaa
    55861 caacatttaa ctccagcggt ctgaaaatgc gcggcaactt acgcagcaag aacgccgagc
    55921 tgattgaaaa ggttagaaca tcctatgaaa ttcaaaacaa acaaactcag ccttaatctt
    55981 gtgcttgcca gctcacttct ggccgccagc attccggcat ttgccgtaac cggagacact
    56041 gatcagccga tccacattga atcggaccag caatctcttg atatgcaagg caacgtggtt
    56101 acctttaccg gtaatgtcat cgtcacccag ggcaccatca aaattaatgc cgacaaagtg
    56161 gttgttaccc gtccgggcgg cgaacaaggt aaagaagtga ttgacggcta cggtaaaccg
    56221 gcaacgttct accagatgca ggacaacggt aaaccggttg aaggtcacgc ttcccagatg
    56281 cactacgaac tggcaaaaga ttttgtcgtt ctgacgggta atgcttatct gcagcaggtt
    56341 gatagcaaca ttaagggcga taagatcact tacctggtaa aagagcagaa aatgcaggct
    56401 ttcagcgaca aaggcaagcg cgtaaccacc gttctggtgc cgtcgcagct gcaggacaaa
    56461 aacaacaaag gccagacccc ggcacagaag aagggtaatt aattcgttat ggcaacatta
    56521 actgcaaaga accttgcaaa agcctataaa ggccgtcgcg tggtagaaga cgtcagcctg
    56581 accgtcaact ccggggaaat tgtcggtctg ctggggccaa acggtgccgg taagaccacc
    56641 actttctaca tggttgtagg cattgtgccg cgcgatgcgg gcaacatcat tattgatgat
    56701 gacgatatca gtctgctgcc tctgcatgca cgcgcgcgcc gcggtatcgg ctatctgcca
    56761 caggaagcct ccattttccg tcgcctcagc gtttacgata acctgatggc ggtactgcaa
    56821 attcgtgacg acttgtctgc tgaacaacgt gaagaccgcg cgaacgagct gatggaagag
    56881 tttcacattg agcacctgcg tgacagcatg gggcagtcac tctccggggg tgaacgtcgc
    56941 cgtgtagaaa ttgcccgcgc actggctgcg aatccgaaat ttattctgct cgacgaaccg
    57001 tttgccgggg ttgacccgat ctcggttatc gacattaaac gcatcattga gcacctgcgc
    57061 gacagcggcc tgggcgtgct gatcactgac cacaacgtgc gtgaaacact ggcggtttgt
    57121 gaacgcgctt atatcgtcag tcaggggcat ttgatcgccc acggcacgcc tacagaaatc
    57181 ttacaagacg aacacgttaa gcgtgtatac cttggggaag acttcagact ctgatagggt
    57241 agaagtttgc gacgttttag caggagagta cgattctgaa catgaagcaa ggtttgcaac
    57301 tcaggcttag ccaacaactg gcgatgacgc cacagctcca acaggcaatt cgtctgttgc
    57361 agttgtcgac gctggaactt cagcaggagc tacagcaggc gctggagagt aatccgctgc
    57421 ttgagcaaat cgacactcat gaagaaatcg acacccgcga aacgcaagac agtgaaacgc
    57481 tggacaccgc cgacgcgctc gaacaaaaag agatgccgga agagctgccg ctcgatgcca
    57541 gttgggacac catttacacc gctggtacac catccggcac cagcggtgac tacattgacg
    57601 atgagctgcc gatctatcag ggcgaaacga cgcagacctt gcaggattac ctgatgtggc
    57661 aggtcgagct gacaccgttt tccgacactg accgcgctat tgctacctct atcgtcgatg
    57721 ccgttgatga caccggttat ctgactgtcc cgctggaaga tattctcgaa agtatgggcg
    57781 atgaagagat cgacatcgac gaggttgaag ccgtccttaa gcggatccaa cggtttgatc
    57841 cggtcggtgt agcggcaaaa gatctgcgtg actgcctgct aatccaactc tcccaattcg
    57901 ataaaaccac gccgtggctg gaagaggcca gactgatcat tagcgatcat ctcgatctgt
    57961 tagccaatca cgacttccgc actttaatgc gcgtcacgcg tctgaaagaa gatgtgctga
    58021 aagaagccgt caatctgatc cagtcgctcg atccgcgccc cgggcagtcg atccagactg
    58081 gcgaacctga gtatgtcatt ccagatgtgc tggtgcgtaa gcataacggt cactggacgg
    58141 tagaactcaa cagtgacagc attccgcgtc tgcaaatcaa ccagcactac gcctcgatgt
    58201 gcaataacgc gcgcaacgat ggtgacagcc agtttatccg cagcaatctg caggatgcca
    58261 aatggttgat caagagtctg gaaagccgta acgatacgct actgcgcgtg agtcgctgta
    58321 tcgttgaaca gcagcaagcc ttctttgagc aaggtgaaga atatatgaaa ccgatggtac
    58381 tggccgatat cgcccaggct gtcgaaatgc atgaatcgac gatatctcgc gtgaccacgc
    58441 aaaaatacct gcatagtcca cgaggcattt ttgaactgaa gtatttcttt tccagtcacg
    58501 tcaataccga gggcggcggc gaagcttcct ccacggcgat tcgtgcgctg gtgaagaaat
    58561 taatcgcggc ggaaaaccca gcgaaaccgt tgagcgacag caagttaacc tctttgctgt
    58621 cggaacaagg tatcatggtg gcacgccgca ctgttgcgaa gtaccgagag tctttatcca
    58681 ttccgccgtc aaaccagcgt aaacagctcg tttgacccaa ccgataagga agacactatg
    58741 cagctcaaca ttaccggaaa taacgtcgag atcaccgagg cactgcgcga atttgttaca
    58801 gccaaatttg ccaaacttga gcaatatttt gaccgaatca accaggtcta tgttgttctg
    58861 aaagtggaga aagtcaccca cacctcagat gcaacactgc atgtaaacgg tggtgaaatt
    58921 catgccagcg cggaaggtca ggacatgtac gctgccattg atggcttaat tgataagctg
    58981 gcacgccagt tgaccaaaca taaagataaa ctgaaacaac actaattgtc cgggcaatta
    59041 gcatgtgcat ggcggcctgt tgtgcggcac aacgggccat ttgtacggtt aatgctccga
    59101 gcctgttcca ctgtttgagt gggcaggttc ttaggtgaaa ttatgacaaa taatgataca
    59161 actctacagc ttagcagtgt tcttaacagg gaatgtacgc gaagccgcgt ccactgtcag
    59221 agcaaaaaac gcgccctgga aatcatcagc gagctggcgg cgaaacaact tagtctgccg
    59281 cctcaggtgg tttttgaagc tatcctgacg cgggaaaaaa tgggcagtac cggtatcggc
    59341 aatggtattg ccattccgca tggcaaactg gaagaagata ctctgcgcgc cgttggcgtt
    59401 ttcgttcagc tcgaaacgcc tatagctttc gatgccatcg acaaccaacc ggtggattta
    59461 ctttttgccc tgctggtgcc ggcagaccaa actaaaacgc acctgcatac tctgtcactg
    59521 gtggcgaaac gtctggcgga caaaaccatc tgccgccgtt tacgcgcagc ccagagcgat
    59581 gaagagctgt atcaaatcat tacggatacc gaaggtactc cggatgaagc gtagttattc
    59641 ggtaatgtct cttttagacg ttgtgaggag aaacagtaca tggtactgat gatcgtcagc
    59701 ggacgttcag gttcaggtaa atctgtcgcc ctgcgtgcgc tggaagatat gggtttttac
    59761 tgcgtggata accttcccgt agtgttgtta cccgatctgg ctcgaactct ggccgatcgc
    59821 gagatttctg ccgccgtcag cattgatgtt cgtaatatgc cggagtcacc agaaatattc
    59881 gaacaggcga tgagtaacct gcctgacgct ttctcaccgc aactactgtt cctggatgcc
    59941 gaccgtaata ccttaattcg tcgttacagt gacacgcgcc gactgcatcc gctttccagc
    60001 aaaaacctgt cgctggaaag tgctatcgac aaagaaagcg atttgctgga gcctctgcgt
    60061 tcgcgagcgg atctgattgt cgatacctca gaaatgtccg ttcacgagct ggctgaaatg
    60121 ctgcgtaccc gtctgctggg taaacgtgaa cgcgaactga ccatggtctt tgagtctttc
    60181 ggcttcaaac acggtatccc tatcgatgca gattacgtct ttgacgtgcg cttcttgccg
    60241 aacccgcact gggatccgaa actgcgtcca atgacaggtc ttgataaacc tgtcgccgcg
    60301 ttcctcgacc gccacacaga agtacacaat tttatctacc agacgcgaag ctatcttgag
    60361 ctatggttac ctatgctgga aaccaacaac cgtagctact tgacggtcgc cattggttgt
    60421 accggcggga agcaccgttc ggtgtatatt gcagagcaac tggcagacta cttccgctcg
    60481 cgcggtaaaa acgtccagtc acgccatcgt acgctggaaa aacgtaaacc atgaccgtca
    60541 agcaaactgt tgaaatcaca aacaagctgg gcatgcatgc ccggcctgca atgaagctgt
    60601 ttgaattaat gcagggtttt gacgctgaag tgctgttacg taatgacgaa ggcaccgagg
    60661 ccgaagccaa cagcgttatt gcgctgctga tgttggattc tgccaaagga cggcagattg
    60721 aagttgaagc gaccggccca caggaagagg aagcactggc cgccgttatc gccctcttta
    60781 actctggttt tgatgaagat taatcttcat cactttgaca tacaactccc ttcaaactcc
    60841 ccccgacaat aagaaaatca cgtactgaaa tcattctcaa tcaacgtcat ttgtacattt
    60901 tgtgcgcttt tcactttcag aagaacctta agaaaacctt aagaggcatt gtttaggttt
    60961 tgtttaagtt aatcgaccat actggagatc gtcagaaaat atttccagga gatggcatga
    61021 ttcgcttatc tgaacaaagt cccctgggca ccggaagaca tcggaaatgt tatgcgcatc
    61081 cggaagatgc ccaacgctgt atcaagattg tctaccatcg tggcgatggt ggcgataaag
    61141 agatccgccg tgagttaaag tactacgcgc atcttggtcg ccggttaaaa gactggagtg
    61201 gaataccgcg ctatcacggt accgttgaga cggattgcgg aaccggttat gtctacgatg
    61261 tgattgcaga ttttgacggc aaaccctcca ttacgctgac cgaatttgct gaacaatgcc
    61321 gttacgaaga agacattgca caactgcgcc agctactgaa acagctgaag cgttatttgc
    61381 aggataaccg tatcgtgacg atgtcgctga agccgcagaa tatcctctgt caccgcatca
    61441 gtgagtcaga ggttatcccg gtcgtctgcg acaacattgg tgaaagcaca ttgattccac
    61501 tggcgacctg gtcgaagtgg tgttgtctgc gtaagcaaga gcggttatgg aaacgattta
    61561 tcgcccaacc ggcgctggct attgccctgc agaaagatct gcaacctcgt gagagcaaaa
    61621 cgctggccct cacttcgcgc gaagcttaat ccagctggtg ttgttgcata aacggctcac
    61681 cgcctaactg atacatctgc cgtaaaatcc acgcctgacg gctacgcacg tagcccgatg
    61741 gcgaggagac tttgaaacga agtggattag gtaatacagc tgccagtaat gcagcttccg
    61801 accgggtaag tttgctcgcg ggtttgtgga aataacgttg tgccgcagct tcgacgccaa
    61861 acacaccgtc gccaaattcg gcgatattca ggtaaaccgt caggatacgc tttttgctcc
    61921 agactgtttc tatccccagc gttaatccag cttccagccc ttttcgtacc cagctacgcc
    61981 catcccataa aaagagattt ttggccgtct gctgagaaat cgttgaagca ccgcgaatac
    62041 ggttttcatt gcgctcgttg tgcgccaggg ctttctcaat ggaagcgaca tcaaagcccc
    62101 agtgctcagg aaatttctga tcttctgcgg caatcaccgc cagtcccatc cacggcgaga
    62161 tttgatccat actgacccag tcagaatgtg ccacgtaacg aaaattgcca tgcagccagg
    62221 cgctgacctg tcgctcgacc attaccgctg agaagggaac aggcgcaaca ctaaacaacg
    62281 cgatgccccc gccccagaaa acggcgagga caaccattaa ccgcaaaaga aaacggcgaa
    62341 cgaaactaaa caccgttaag cggcttttac tcattcagcc agaaccagca cgcgggaaac
    62401 cagcttatca atgccgctcg ccgcttctgc aatgttctgc gccagcatat atgctggggt
    62461 ggtgacaatc ttattgtctt catcaaccac gatatcatcg acaggacagg gcacatgctc
    62521 cgcgcccatc tcttccagca cttctgcggt atcgatatca gtaccgatgg tcaaacgcag
    62581 cgggaaatcg aaaattttcg gcagcatcgc cggggcaata cacataaaac caagcggttt
    62641 tccgtcctga tgcatcgctt gtgccagcgc ctttaattca cggtcaacgg tgcattcgct
    62701 accaagagtg gcaaaattgc ttaaattctt cgccgcgcca aacccccccg gcacaatcaa
    62761 cgcatccagt tcagcggcat cggcctgggc cagaggacgg atttcaccgc gcgttattcg
    62821 tgccgcttca atcagcacgt tgcgcgtttc cgtcatcgct tcgccagtta aatggttgat
    62881 aacatcaacc tgctgcttat ccggtgcaaa gcagaccgcc tgcgcaccgc tgcgtgaaat
    62941 agctaacaac gtcaacaccg cttcatgaat ttcagaaccg tcatagacgc cgcatccgct
    63001 cagaattacg ccaattttct tcattgtgat catcctttcg caattgactg aaacacatta
    63061 atttttttaa taaaaatggt acgcatcaca catttaactg attcatgtaa caaatcattt
    63121 aagttttgct atcttaactg cgtgcggcct gaaaaacagt gctgtgccct tgtaactcat
    63181 cataataatt tacggcgcag ccaagatttc cctggtgttg gcgcagtatt cgcgcacccc
    63241 ggtctagccg gggtcatttt ttagtggctt ttgccaccca cgctttcagc acttctacgt
    63301 cgtgacgcca ctcttctttc atctcttcaa tccattcacc gacgttatct tcccaggcag
    63361 gaaggtccgg agactgaatt tgctgaccca gctgttgcag atggcgtaac cccactgacc
    63421 ccgccgcacc tttaatttta tgtccttcct ctacaatgcc ttttttatcc tgtgccgtca
    63481 gattcgactc cagcacgctg acatagcccg gcatcatctt ctcaaacacc gctaacccgt
    63541 cggtgatcag cttcggtcct acaagttcga gatactgttc cagcatggga atatcgagca
    63601 atgcttctga tttactgttc tcttctgtcg tcaccgtact ctcctcatca tcctgggtat
    63661 cccagaattt cttgatcatc gcggttagcg ccggaaccga aagcggctta ctcagcacat
    63721 catccattcc agcattgagg tactcttgtt tgtctttcag cacgttagcg gttaaggcca
    63781 ccagcggcgg taaatcctcg cgcggataac gcttcgtcag ttcacgagag atatccagcc
    63841 cggtcatatc tggcaactga atatccagca acaccaggtc gtattcgccc ggtttaaaca
    63901 tctccagcgc cgccttgccg gtcatggcga catcaacgct gttacctaat ttttccagca
    63961 cagaacgcgc aacaatcacg ttcagttcaa tgtcttccac cagcagcaca ttcagcgccg
    64021 gtaaaggcat atcgtcttca tcaaacgcat catcgacctc ttctgctacc gacggtgcgt
    64081 ggatcgtcaa cgtaaaggtt gaacctttgc cctgttcgct ggtaaccgta atatcgccgc
    64141 ccatattttt cgccagacga cgagaaacgg ccagaccaat accggtgccg gtggcaggtt
    64201 taccgccatg actgtctttc acctggtaat acatggcgaa aattttatcc agctcatcct
    64261 gcggaatgcc gataccagag tcttccactt caaaatgcag catatcgcct tcatcgtagc
    64321 gcacgcgcac ggtaacctgg ccttgctggg tgaatttgac ggcgttactg atgaggttcc
    64381 acaggatctg ccgtaaacgc gtcccgtcgg taatgacctg atgcggtaat ggcagcgtcg
    64441 gctccaggtt aaagcgcaat cctttttgtt gcgcctgcaa tgcggagaga ttttccagat
    64501 cggcaaggaa gctggtgaaa tcaaccggtt gattatcaag ctggaccttg cgccgttcca
    64561 tcttatccat gtcgataata tcgttaaaga tattccccag cgtgacggcc gaaacatgga
    64621 tggtcttgag atatttttcc tgctcggcgg tgagttcggt atccagcaga atacggctca
    64681 ggccgacgat accgttcagc ggtgtacgca attcgtgact gatggtggag ataaacgtcg
    64741 ttttgtcgcg gctggcccgt tcaagcgcat cctgataccg cttacgctcg gtaatgtcgc
    64801 gaccaaagcc catcaaaccg tgacgtttac ccacgcggtc gtagtacggc actttacgga
    64861 tttcaaagca ggctttgcgc ccgtccgggt aatccagcca ctgttcatag gtcagtgaca
    64921 cattatgacg gaacactttt tcatcggttt caatgacttt tgcggcggct tccggtgagt
    64981 aaacatcagc aggtttcagg tgaaccagtt gtttttcgct ttttccggtc agcagctcca
    65041 tcgcgcggtt acagccggaa aactctttat cttcgttacg ataaaaaacc aggtcgggtg
    65101 aagcatcaag gaaggaacgt aagaatgagg attgctgctc gagctgaatt tgtgtctctt
    65161 cgcgctcttt gatttcaatt ttcagttggc cgaaggtttc ctgcagttct gcttccgctt
    65221 tttcacgaac ggcgatttcc tgatttagct gggcaatatt atcttttaac tgaacgttga
    65281 ggctcaaatc gcgctcgcgc atctcctcca gtttttgcac cagccgtgac agacgttgtc
    65341 gtgactcctc cagttgctcg acgaccaccg atagaaagta gaccgcccac ggcgtaatca
    65401 gcaaaccaaa gaagatagaa cgaataacat caatgctttc gacctgacca tgcagcacca
    65461 tggttaccgc catttgtacc acaatggcaa gaacgacgag ggccagcgcc agcaacattg
    65521 agaagcgcac cagacctaac ttcatcatca ggtcaacata atactgcgcc agcagacgaa
    65581 tttgcttcat tagggaattc cttcacgaca acctgcccca ataataccca attctgacag
    65641 ttacgttata aattgtgtga gaaatgcgga attcccctca acgacctact ccgttggagg
    65701 tatccacgga cgttccagcg ccgatccctg tacgccatgt tcattcagat agcgatccag
    65761 ctcgaccatt cccgtccatc gattttcgca ccacagagga gcaagcagcg tcgggcgacg
    65821 ggcgctggcg gaaatgcggt ggtagatcac ttccggtggc gtatggcgaa tcatttctcc
    65881 ggcagtgagc gtgtaatcct ccagttcaat accgttcaaa cgccccgctt cccaggcttt
    65941 cgccataatg ctgcctttca caatatgcag cggatgcagc tttatgccgt ccacgccggt
    66001 ttcaaccact cgctccagcg tttgcaaaca ttcagcctgc ccttcgccag gcaggccgac
    66061 aattaagtgg gaacacacct tcagcccgcg ctgacgtgcc agctgggttg tacgctgata
    66121 acaggcaaaa tcatggccgc ggttgatgcg atgcagtgtt ttgtcgtggg cggtttgtag
    66181 ccccagctcc agccacactt cgtaaccctg gtccttatat tcgcaaagca gatccagcac
    66241 cgcatccggc acgcagtccg ggcgggtacc aacacacaaa ccgacaatat tggcctggct
    66301 caccgcctgc tgatacatag aacgcagcac ctgaacttcc gcaaaggtgc tggtatacgc
    66361 ctgaaagtag gccagatagc gtttagcgcg gttaactaaa ttcgcctggt gcgccagttg
    66421 ctcggcaatg gaacgatgct gctgcgcttc atcggcaaac gaggcaacat tacagaatgt
    66481 gcagccacca cgcccgatgg taccgtcacg gttagggcag ctaaaaccgc cgtgtagcgt
    66541 cagcttatgc accttttgcc cataacgacg ggtgagatca ccaccaaaca tattgactaa
    66601 tttctgtaac tgcataatct gatagaccgc gccttgaaaa gaggccaaag cctgccattt
    66661 ttagctcaat tcggcgatga cctggatcaa tcgtcccggc ccgcttttat caactgcata
    66721 atcaatcaaa attaccgaaa tttcatgcat aatcacataa atcacttttg cttatcttgt
    66781 gtcagatttt tttatctcct tatggatttt aggcaaaaac agtagcatga aacgtcatta
    66841 ccaattaagg cagtataaaa tgctggtttt ctcgtcagtt caaggcagga taagggttaa
    66901 cacgccttta tgacagtcag gaattgactg tt
//
LOCUS       DAPGWB010000006        65013 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.006, whole genome shotgun sequence.
ACCESSION   DAPGWB010000006 DAPGWB010000000
VERSION     DAPGWB010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 65013)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 65013)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..65013
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.006"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(228..2801)
                     /gene="clpB"
                     /locus_tag="RHX79_000364"
     CDS             complement(228..2801)
                     /gene="clpB"
                     /locus_tag="RHX79_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HDV2195580.1"
                     /translation="MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG
                     SVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG
                     DNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA
                     LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF
                     IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ
                     KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID
                     LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD
                     KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE
                     LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL
                     HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD
                     SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA
                     HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL
                     VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE
                     ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV
                     Q"
     gene            complement(2931..3662)
                     /gene="pgeF"
                     /locus_tag="RHX79_000365"
     CDS             complement(2931..3662)
                     /gene="pgeF"
                     /locus_tag="RHX79_000365"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase"
                     /protein_id="HDV2195581.1"
                     /translation="MSKLIVPQWPLPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNP
                     DHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAV
                     MTADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADKPENILAWLGPAIGPR
                     AFEVGAEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTY
                     TENETFFSYRRDKTTGRMASFIWLI"
     gene            complement(3659..4639)
                     /gene="rluD"
                     /locus_tag="RHX79_000366"
     CDS             complement(3659..4639)
                     /gene="rluD"
                     /locus_tag="RHX79_000366"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017383977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HDV2195582.1"
                     /translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQR
                     VLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDL
                     VVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
                     SLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHF
                     RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDR
                     QALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDWL"
     gene            4774..5511
                     /gene="bamD"
                     /locus_tag="RHX79_000367"
     CDS             4774..5511
                     /gene="bamD"
                     /locus_tag="RHX79_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDV2195583.1"
                     /translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
                     DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH
                     PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYT
                     TDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLM
                     ENAYRQMQMNAQAEKVAKIIAANSSNT"
     gene            5782..6123
                     /gene="raiA"
                     /locus_tag="RHX79_000368"
     CDS             5782..6123
                     /gene="raiA"
                     /locus_tag="RHX79_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDV2195584.1"
                     /translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
                     PQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVK
                     DANFVEEVEEE"
     gene            complement(6275..7081)
                     /locus_tag="RHX79_000369"
     CDS             complement(6275..7081)
                     /locus_tag="RHX79_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001696625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDV2195585.1"
                     /translation="MTVGIAIQHQPAHTPEHTKVYQTDNATLCRGNALEILPLIEPES
                     IDALITDPPYSSGATHKAGRTNQGSHAKYLNGENLHRFDGFAGENMDARSWAYWTQLW
                     MAQAHRAVRPGGYALVFTDWRQLPALTDAFQASGFTWRGIIAWNKGRGSRTPHTGYFR
                     HQCEYIVWGSKGHLDKSPSGPFDGCMTFPVIPSKKMHPTGKPEELMAELVRTANSGGT
                     VLDPFMGSGTTGVAALKAGRKFIGIETSDHYFEVAAQRLRGTITTTISTT"
     gene            complement(7011..7223)
                     /locus_tag="RHX79_000370"
     CDS             complement(7011..7223)
                     /locus_tag="RHX79_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001444041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Com family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDV2195586.1"
                     /translation="MTQNVRCKNCNKLLARASFHYIEIKCPRCKTLNQITRAIEHPTH
                     MRSYDRGDRNPAPTSTYTGTHQGLSD"
     gene            complement(7476..7616)
                     /locus_tag="RHX79_000371"
     CDS             complement(7476..7616)
                     /locus_tag="RHX79_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hok/Gef family protein"
                     /protein_id="HDV2195587.1"
                     /translation="MSQKSLIAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQC
                     KQ"
     gene            complement(8445..10142)
                     /locus_tag="RHX79_000372"
     CDS             complement(8445..10142)
                     /locus_tag="RHX79_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000767297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195588.1"
                     /translation="MKLIQRCMINGERVEIADISLVLTLNAAGRGFISVNNLSPEHSL
                     AGAMVQIDLGRDGEAWRYFSGYIERDQPAENGSRRLFIREAAAVLDFDFPCSMQHPTL
                     RGVLDNLGRQSGIVFITPDADYASIPTPYITHSGSGAQLLSQLGRAFSISDYVWHPMP
                     DGSVFVGSAADSRFASITMPDIPQQYTLGQSGGNSIDIMFMETVRPGVNLPAGRITRV
                     ALNNEKMTLTWERLTATGTPVSKSPLRRQMETQFPELASGTLHTRLARVIAPTEPTTL
                     GDVADSFRPRYAVDVQLLDENGNDKSDTPVYPAVPLPVPMAGSEAGCFAYPPAGTIVE
                     ISNIEGRPDKPVIRQILPAGHNLPDVKPGEQLQQQRAEVFQRVTTDGSWHRETDQQIR
                     EHSARRTINSDQEERTTTTRTTTVQANDITSVLGTSKLMTGQTEHITTGHYAIAAGEH
                     IQMVAQDLLTKLKGATSTIERDLTENVGGRRTCRADGGLEFTAPTVFIGRGGSREKSG
                     LNLLTLLIDILDLVQLLATHTANHTHSNTGAPTNNSELAADAKQATSLREKYGDLIA"
     gene            complement(10139..10714)
                     /locus_tag="RHX79_000373"
     CDS             complement(10139..10714)
                     /locus_tag="RHX79_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000192895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195589.1"
                     /translation="MTQMIVLALDGEAILLRNITVSATMQLPDKDMSGQSTSTTSAQQ
                     GNKAKELRVSGVIDFNDEAILTRIFQLAEATESNGAKKTYRIANATAKAINMRQGVFS
                     GGIDATEQQGKMHWQITFTLREKLSVPEKASARSGSQKTIARQQTQNGSEQVPDKGMN
                     TQSSFWKKINDAVGSGLDAVGIGSVKEEGKT"
     gene            complement(10686..11399)
                     /locus_tag="RHX79_000374"
     CDS             complement(10686..11399)
                     /locus_tag="RHX79_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000870770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195590.1"
                     /translation="MKWKEVILRPSAINIKCSVVCLHPWSENTGNIKPSGRYLSPENA
                     VSALLPYLKESTEKDIVALLFCAPSAGEFLSLARQFSGAFPLPEVGRMSRMISSQLSL
                     AISRMQIPARPATSLPEPIMLSTQTTRSMSLAATIAQAATPAATSPETLSSSLHQFMN
                     ARDKALQEIADQQAALRQKVCPVWRFCYKGALSQAAVLIQKNIPHPEWVFTAVMLFVG
                     DNLSSLREALHDPDDCPCA"
     gene            complement(11396..11968)
                     /locus_tag="RHX79_000375"
     CDS             complement(11396..11968)
                     /locus_tag="RHX79_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001027739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HDV2195591.1"
                     /translation="MKIIDIKAMKYLEDGSVSCEVLFEGRADYIPYRAVENDSAASGQ
                     RVWGTLMSGEFGEIIPFTVTAEMLDKEKELKKEEIRRWRTEQEAQPFTFEWNSSTWNG
                     GKSSLERLFPAVMAAKSGVAHNATVWSDANNQQIKLSQQKLEELLTAMVQAQAARNDE
                     IYLRQREMKNTLATLNNIAAIRAFQVGKAE"
     gene            complement(11968..14007)
                     /locus_tag="RHX79_000376"
     CDS             complement(11968..14007)
                     /locus_tag="RHX79_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001275089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2195592.1"
                     /translation="MSALLTKAFEKWVAECTASNLPARPDAIIFALMEREPTREDNTV
                     PEDRITYAVNELTCGQLSQDTIVCSAVVPDDCVFSYDWICLIHQASGTLCGVIKTPVR
                     QKTTGESLVRNFTITYRGIAQSAQISVPPQSWQVDITPELKTALKTPNHLSEIAAEGE
                     EAQQESRDNLGLKVSAIMEPQGDIRDRTEGCLAIPGAFGFGHIFIPGDAVRFNNEADL
                     LAWVRCVEPGEYYVEGGSGVLPGIAFRGMISIRWLEAERSTPLPPHTAKAIIFYGING
                     DIYYNRYWSTGNGLLTGWENLKVNEASLRALIETRAPLNSPAFTGTPTTPTPPDDAVG
                     LEMANAAFVRKLLAALVGSSPEALDTLNELAAALGSDPNFATTVTNALAGKQPLSDVL
                     TAISRLNAQADNLLYFDSDGNASLTRLTPEARSLLAQATPEDMRRVLELERSDTVVPQ
                     NNIYDRSEGVVAIPGTLGYGGYYRHEDKVIFRGENGPADFISWVSTTPPGRYAVGDGT
                     SYSAPQIIDKENRLEGIVEIIIPDTASSSSQSRADKLIIFMSKKGEMFINWLKWTSAG
                     AGLAGWGNLSAKGLRSADFWGNPGIDGVTLAAISVADLASHKRGDRISGEKLRHVSLM
                     FENNGNPCAAASVYNVSMMYGLLPGSYFILNGSSQSLNCGNKANAWWICLVMRAE"
     gene            complement(14014..14565)
                     /locus_tag="RHX79_000377"
     CDS             complement(14014..14565)
                     /locus_tag="RHX79_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000902866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HDV2195593.1"
                     /translation="MLHLKNITAGNPKTAEQYQMTKQYGVTWLFSEDDKNWYEEQKNF
                     ASDTIKMVYTGDGRVVWVGKDMTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFV
                     FDYKLKAEDERDALLKQSSIMTCEWEKDLLLGLISDEDREKLKACRIYTKKLREMTFS
                     QVTDKASYAAIVWPELPQNISEN"
     gene            complement(14568..16268)
                     /locus_tag="RHX79_000378"
     CDS             complement(14568..16268)
                     /locus_tag="RHX79_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2195594.1"
                     /translation="MSTIITEQYEHWCANQIISGKPARPDTFVFAYIPGQDESAEIPR
                     DEILPDESMIQYRAPVTQYGHLSPNATAFSIILDTTVGDFEYNWIGLLNEESGVLCMI
                     AHTPRQQKIKTANGVQGNNLIRTFSMEFDGAAAAMHIDVSADVWQIDFTARLAGMDEA
                     RRLLAFDHYGEAAFLGDGFQVSYQDGTATVAAGVGYVGGLRVSLREPYSLPAAVGDTL
                     WIDASWQGFVTGEWNTVFTFCARQEHASYTDGNGFRHFVAPLAKMTGDGPQDLRPETP
                     DEEQSNALAEHEKSRHHPDATLQEKGFAQYSNSTDSDAEDRAATSKAVKAAMDKAKDA
                     VERDGDTMTGELKIRGVNALRIFNEAFGLIFRRSEECLHLIPTSEGQGENGDIGPLRP
                     FTINLRTGEVSMLHAVSVGGGSKVNGALGIGVQNALGGNSIAFGDNDTGLKQNGDGLL
                     DVYANSVHVLRFQSGSIQSNKPVNVTGRVTPSDYGNFDARYQTKTGGVQDVRYGSEMY
                     YNPGGNQISWTFRSPSGHGLSGINVQETGSNSADNIGGVYYRPLQKLINGTWYNVASV
                     "
     gene            complement(16265..16900)
                     /locus_tag="RHX79_000379"
     CDS             complement(16265..16900)
                     /locus_tag="RHX79_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000775222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195595.1"
                     /translation="MKLPEIPEFPLPTWMNKGEPLTLAHSSHRYWEKVYSWLTWPLQQ
                     IDVDTCAEPLLNLLAYQRNITRFKGEPVSLFRLRVKHAFINAQDSGERAGFERIFKRL
                     GVGDVKTLERQLQHDWDVILLRINDTQLSENNALMMQLVRQYGRTCRRYFFQVINTTT
                     ARLTAGTFDGHYRYHTAEATVRKDTIWLTASLQAGHYGLSVEHYTLQADEA"
     gene            complement(16897..18081)
                     /locus_tag="RHX79_000380"
     CDS             complement(16897..18081)
                     /locus_tag="RHX79_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000606950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDV2195596.1"
                     /translation="MINGKPTADYERILADNGMPVTEEQARAEFEAIVKDEGLITNTS
                     RMSPFWRLITAITTKPVMWLKDALVNVVMKNLFLADASGVFVDVFAWAVNLQRKAATH
                     AAGVIRFTKNDIDHAVTVPAGTQIQTERINGVIYTLTVVRDTVIPAETLSMNIDVSAE
                     QAGAGFNLAPGYYRILPVAIDGIAGVENDENWLTTPGANEESDDELRDRVRNQFNLAG
                     AYHTDAVYRGLIAGVAGISADRIYFLHDAPRGPGTANAYILLDTGIASEPFVDAVNAF
                     INDEGHHGHGDDLRCFSMPETRHTLTVTLWLYATLNLSDGEIQTLLRNVENLVRCAFR
                     ENSDYDVQKTWPYSRFSMSRLGEEIHQVFPQVESVTFSLPDILSDLAVPRLESLTVEV
                     SA"
     gene            complement(18074..18424)
                     /locus_tag="RHX79_000381"
     CDS             complement(18074..18424)
                     /locus_tag="RHX79_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000556622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2590 family protein"
                     /protein_id="HDV2195597.1"
                     /translation="MHTDKPLYIDLLITGRNLTLNSASEPVLCNNRESIAQDCQHAII
                     ESGLATRLLAEKSPTLRADIMMQMTLLIEDDERITPGTVSVTEETPLSGRLLISAHTE
                     DFFEPLTFTVSLDD"
     gene            complement(18414..20510)
                     /locus_tag="RHX79_000382"
     CDS             complement(18414..20510)
                     /locus_tag="RHX79_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000082776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDV2195598.1"
                     /translation="MSQQRLELLLELTDRLTRPLRAAGRQVQGFAATSRGAFRDIATG
                     GAALWGVGAAIQGALMPAIEMDRALGEVKSLGVAESGLRKLSRAAVDFTMEYGGAAQD
                     FVRASYDIQSAIAGLTDDELSRFTTASATVAAATKSSSQTITAYMGTMYGIFKDQADA
                     MGKSKWVEQVAGQTATAVQMFKTTGDNMSAAFTTLGASAKAAGIDAAEQFAVLGQLQA
                     TMSGSEAGTKYKAFLAAVGSAQKKLGLNFVNKDGTMKSVVEIMKLIRGKFGDLSKVAD
                     SDLLKSAFGSDEAVAMIKLLNADIGGLEKNIATLGNIKGMDKAVEMAQAMADPWEQAA
                     AIINGIRIEIGTQLLPVLYPFIQKSNEGGKSFVAWLRLYPNITRAIGLLSAALLGIAA
                     VGAVVNIMVGVAKFVWTGLRLVWLAAVAPLKILILLKRTLTATMWAFTVVARTVRALY
                     LAMSIAMGTYNVKAKIQLALLKLQRAGLWLYSVALGAAGIAMKIYTAVTSGAAIATQL
                     LFSPITLIILALAALGVGIYFLITRWDEIKAALMDTAAFQWVAGIINSMGAWFGNAWS
                     AIRDGWNALVNYFSTHSPLDALKDLAGGILKIFSNLWELVKQSFSDSWGWIVDKLNMI
                     PGVNIGTSESTGSGEGSVLTGGKAISAGPGGIAAEMQNNSENQTTIDNSRRVVNVNVQ
                     DPSPARLNEWMELHAY"
     gene            complement(20510..20656)
                     /locus_tag="RHX79_000383"
     CDS             complement(20510..20656)
                     /locus_tag="RHX79_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000906384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195599.1"
                     /translation="MLILRRHWLPGEDDSPQSLAAAVWLDNHYWENMSIAVNNGIIRA
                     FKGS"
     gene            complement(20698..20985)
                     /locus_tag="RHX79_000384"
     CDS             complement(20698..20985)
                     /locus_tag="RHX79_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative phage tail assembly chaperone"
                     /protein_id="HDV2195600.1"
                     /translation="MNDKNTQTTAENTITLQVGEHELTFIPTVKAYNDLQNDFMPDNK
                     IAPLKNYLRRIVIKEHRDLLNQLLEKPGMPASLATAVNNEFVPEVEITVKK"
     gene            complement(21056..21397)
                     /locus_tag="RHX79_000385"
     CDS             complement(21056..21397)
                     /locus_tag="RHX79_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007710822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HDV2195601.1"
                     /translation="MKLSDKQQQFTVMIGKLIQFAHQRGYGLTFGEAYRTPEQAKLNA
                     QKGSGIANSLHCQRLAVDFNLFINGEYQTRTEAYRELGEYWESLGGAWGGRFKNRPDG
                     NHFSLEHDGVR"
     gene            complement(21507..21803)
                     /locus_tag="RHX79_000386"
     CDS             complement(21507..21803)
                     /locus_tag="RHX79_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001155242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDV2195602.1"
                     /translation="MQEHERTIITLGILGGIAAASRVLAGAEPITLRLFVGRTLLGSA
                     LGVSAAALLVRYPNLDPLAIAGAGTAMGVAGYQIVEIFLRHMRRKLGEKENKEE"
     gene            complement(21807..22262)
                     /locus_tag="RHX79_000387"
     CDS             complement(21807..22262)
                     /locus_tag="RHX79_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2597 family protein"
                     /protein_id="HDV2195603.1"
                     /translation="MTTRINGMAFDTFIGGTDIHVKSISLDISDESAVAKTRGIPDGK
                     LRGPVSAEGEIEMSTRSFNQLGEVAAQAGSWRDLPPMDFVFYANTGTEEIRVEAFGCE
                     LMLSGLLSIDTESADLTTHKIKYVVASPDFVRINGVPVLSENDVRGLMG"
     gene            complement(22259..23407)
                     /locus_tag="RHX79_000388"
     CDS             complement(22259..23407)
                     /locus_tag="RHX79_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000220196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2586 family protein"
                     /protein_id="HDV2195604.1"
                     /translation="MTWPSVTIEQYNTFSSSPDGVENTLLFVGNAQNNKGEVLPVNAN
                     SDLDELLGKNASPLKNFLQSALTNAGQNAFFYVAVLPEAGKGKEATPACQVWQNAILA
                     AQETVSVEGVVITEPVSTKDDINAIQALRQTIINKYQRRIWFILTIAANDNSKTWAEY
                     VAELTALQKGIAAPQVMLVPEIFGFEPGVLAGRLCNSAVTIADSPARVATGPLSALKT
                     TERPKDSTGQAIDLDTLQALATARYSVPMWYADYDGLYWADGVTLEVEGGDYNVIEHV
                     RIADKVARRVRLMAIPKIADRSLNSTPGSIAAHETLFARPLRAMAKSMQINGITFPGE
                     VKSPRKGDVVITWQDEKTVSISIVVRPYACPKTIKVGIQLDKSLEENA"
     gene            complement(23428..24141)
                     /locus_tag="RHX79_000389"
     CDS             complement(23428..24141)
                     /locus_tag="RHX79_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000197974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195605.1"
                     /translation="MTRPVINESQLRQVRRAIREAELPPAKARKLLVRIAKYGLIPAA
                     RRNVKAQRTPEGAAWAPRKRPDKASGRYKNKMLLGLPKLLAIRVDGSGKSVRLFFKKG
                     AYNTGSHGGAVAWVQQHGATIKGRATKRRDSEAMRTRPATRRQAERLLSLGFRAPVGA
                     VSKKTGRRGRRKPSLKWIMENMSMAQAGLVISILKGEQKKRVWEIKIPSRAFLGASDA
                     EFARILEAQLRSLHYGGTR"
     gene            complement(24138..24611)
                     /locus_tag="RHX79_000390"
     CDS             complement(24138..24611)
                     /locus_tag="RHX79_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000192588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2195606.1"
                     /translation="MTQLASLTAFIENNLPARARIPFTSDMDDITLVPFTKSLGHGQL
                     CTQVRKYTAFLRWDAWPYRQLNPDLVFSLVEAWLADNGGDLRQRLAPDAPAVDVEVDD
                     ENEVAWLEISLPLVDPITLVEDENGPIPRGGKRYQLEKPEIWVAQAHQLHCQVMP"
     gene            complement(24621..25115)
                     /locus_tag="RHX79_000391"
     CDS             complement(24621..25115)
                     /locus_tag="RHX79_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000459494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HDV2195607.1"
                     /translation="MFDGKSIHYQQAIIQNDGFWPDIDAGDFEKSRSIPAVTSHETVL
                     TALLCAVTEINTELAARREYWQEQGHIRAADIPGYTVLQPEPRNTDAQPERMQNHITA
                     LYTKAVYARAKADLLPESASVGRREAQPSSEASESRRTLLAEAAMAVRALLGRPRASI
                     ALID"
     gene            complement(25214..25924)
                     /locus_tag="RHX79_000392"
     CDS             complement(25214..25924)
                     /locus_tag="RHX79_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001353014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HDV2195608.1"
                     /translation="MPTPMQRQRARQMDERRAALMTTTDGRAISTESQHIKLLALDND
                     VRQLHNMELLSDKLEFKRNTLLPRWLPHAQAYLEGERVYQNPILVYCIIWLFDTGQFE
                     MALRWADIAIEQGQKTPENFKSELPTFVAHFILEWAETEAERGNSIAPYFQQVFEKIR
                     DKWRVNERLAASYWRFAGVLLLRGDDGKPLASAINDPERLQQADQCLERAAWLHPKIQ
                     VKTLRQRIAARLRALQGT"
     gene            complement(25942..26955)
                     /locus_tag="RHX79_000393"
     CDS             complement(25942..26955)
                     /locus_tag="RHX79_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001057495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HDV2195609.1"
                     /translation="MNMTPEAQKLVNQYISELQKTFSDCGKSSDRFFSLTEPRSIALR
                     KALLESTEFLSFTTCMDVPHPQGQVVTVGESTLRTGRVKSGRFAKGSGIKGNEFKLVE
                     TDSCCVITWEQLAIWANAGSPQEFFNLMNSAAVTNFALDMLRIGFNGKEAAENSDPES
                     HPNGEDVNIGWHEIAKKWGEQPGNTSRILTDAVTLGEGGDYVGLDAMASDLIRTYIPA
                     QYHNDPRLTVLVGADLVAAEELRLYNKEDKPTEKVAAQLLTKNIAGRKAIIPPFMPGK
                     RMVVTMLPNLQILTLKGSRRRKAEDVGDRKQFENSYWRYEGYALGDPDLYAAVDESAV
                     TIA"
     gene            complement(26970..27866)
                     /locus_tag="RHX79_000394"
     CDS             complement(26970..27866)
                     /locus_tag="RHX79_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HDV2195610.1"
                     /translation="MTKQKTDWVVVATSGPTIDGREIDPKWLTDAAEVYNPDERAAML
                     WPYHADSGWRAFTNNYGLVDALKVEKFGDKVQLKARLIPNRFLIEANKAGQKLFTSIE
                     VRENYLGTGKFFVSGIAVTDTPASVNTTRLQFSMGETIHMGNAEALNFTLQSDDELAK
                     RNFFSRFFSSDNHQQGIYQAMNEEQFSQLMGAINKTSERLDKLEENVAQFSAKDAPKD
                     TGDNKPEGSTGDQGQNNAEQNNKDDKTFTLTTEQGEKLFSTVNAIAEKVTSMETAFAE
                     LSKDATKLPGNNPAGGETFNLV"
     gene            28097..29884
                     /locus_tag="RHX79_000395"
     CDS             28097..29884
                     /locus_tag="RHX79_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HDV2195611.1"
                     /translation="MAYSDEVIAAAKSLYLKRHTPKEIQKKLGLNSPRIVYYWATKFE
                     WYMQLNTEGVEDVIARRLAVLAERDHKTQEEHDELDRLIGHHVKLMSVRNKHTERMAE
                     IARMGVDIPQPGRYGKEERGEKGAGKKERPRKANDVSGLTAESFEPFTKKLFAYQLHL
                     RENKFRRVRNLLKSRQIGATYYFAFEAFEDAVLTGDTQIFLSASKRQAEVFRTYIVKI
                     AQTEFGIPIKGNPVKLSNLAELYFLATNSNTAQSNSGHLYIDEYLWIPGFRRLNEVAS
                     GMATHKHWRITYFSTPSSKTHQGYPFWSGDEWRKGDPKRKGVEFPSFDELRDGGRECP
                     DGQWRYVVTLEDAIAGGFNLADINELRERYNETAFNMLFMCVFVDDKESVFKFDDLVR
                     CGVDVSTWEDFHPEEPMPFGNREVWGGFDPARSGDNATFVVLAPPLVAAERFRVLEKH
                     HWRSMSFQFMAERIRSIKARYNMTFIGIDVTGLGYGVFELVQGFARRETVAIHYSVES
                     KNRLVMKMLDLIYANRIEWDEEATDIPASFLAIRQESTNSGNKVTFTAERSEETGHAD
                     IFFAIAHAASNEPLNYKHKRKSTWILSDE"
     gene            29877..30911
                     /locus_tag="RHX79_000396"
     CDS             29877..30911
                     /locus_tag="RHX79_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000038285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDV2195612.1"
                     /translation="MSKKKKYPVLHDGVAKKTASKMTFIEFGDPEPVAAWGCYYGSLW
                     DGYNGWYTPPIERMDLAMLSNIAPYHGAVLRARVNMIMQGFRGGGGMTHAAMAAAVTN
                     LLIFGDMGLLKVRNGFGRVVRLHTLPSLYLRRNNEGGTVIVQAALEDLVYPPGEVVFV
                     AIYDPQQQVYGVPDYIHGMESAMLNVDATRFRRKYYKNGAHLGYILYSTDPDMDPELE
                     AEFRKKIEASKGAGNFKSMFINIPGGDKEGVKVIPIGDSGTKDEFLNIKTISAQDQLV
                     AHRFPPGLAGIIPANTAGLGDPLKSREAYYRDEVIPMRRLIMEGINSDPDIRRLGEVK
                     FILDFDEPME"
     gene            30920..31234
                     /locus_tag="RHX79_000397"
     CDS             30920..31234
                     /locus_tag="RHX79_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HDV2195613.1"
                     /translation="MGKERVKSVAVKRCSGRWKMRRQKARCHCCGAHAVIEKTAWKTD
                     QFADVYYRCTRLECGHTWVMNLTYSHTLVPSGLENGVLKLLIERMRPEEKQMALELLQ
                     AG"
     gene            complement(31303..31662)
                     /locus_tag="RHX79_000398"
     CDS             complement(31303..31662)
                     /locus_tag="RHX79_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000974052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDV2195614.1"
                     /translation="MMKDNSGSQRASVAVMVMIKFVKQYTGKPISLRQLSKETVSLSY
                     LEQIFRYLRESSLVKATRGPGGGYIPTKENYSVGDIVRAMKCSGLYTQHVILAALDNI
                     SLTSLQEDTNYQLSAIE"
     gene            complement(31674..31961)
                     /locus_tag="RHX79_000399"
     CDS             complement(31674..31961)
                     /locus_tag="RHX79_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195615.1"
                     /translation="MSTITKEWLQRKITEFKSWREDIPFGLDEDDHNMLTALEIALAS
                     LEAEPVAWIHANNPIGIPAITRSKDVADSWRSKGWNVLPLYSLTRSINLCH"
     gene            complement(31976..32290)
                     /locus_tag="RHX79_000400"
     CDS             complement(31976..32290)
                     /locus_tag="RHX79_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000211287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid partitioning/stability family protein"
                     /protein_id="HDV2195616.1"
                     /translation="MTTPTRRISFYLKPTVVKSEREACSYLDSLPASERSRAQRAAFL
                     AGLALIKRTPALAYSLAEWSEDEIRMPPLPVQPEKPAQPAADSAPHMQQVKKNIQAFF
                     PK"
     gene            complement(32295..33254)
                     /locus_tag="RHX79_000401"
     CDS             complement(32295..33254)
                     /locus_tag="RHX79_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid segregation protein ParM"
                     /protein_id="HDV2195617.1"
                     /translation="MKICIDDGSTNIKLAWTENGERRNAISPNSFKSEWSAPFGGTQP
                     ANYMLDGVRYGFDPVSDRFVQTTDTQYQYSDVNVIAIHHALVKSGITPQEVDVVVTLP
                     LSEYFDTNAQPDMANINRKKANVMRPVEYQNGEAFTIRNVRVMPESIPAGFKALADMS
                     PFESLLIVDLGGTTLDVAKVQGQLAGISQVFCDPHVGVSLMADAVLSVMATNGMRTSH
                     HIANTIIEHRHDEAWLRQHIHNDAHYASLMAVIREKEETLKQRVIRALAGFSGYGRVM
                     VVGGGAEIVAPAICEACGVNATFIADGVPQFALVNGLYAMDQE"
     gene            complement(33331..36153)
                     /locus_tag="RHX79_000402"
     CDS             complement(33331..36153)
                     /locus_tag="RHX79_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310660.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HDV2195618.1"
                     /translation="MTAEYIRDWQQPRHAVGREGTGIPAPESALSSWLDAYRVENERR
                     QEMADAAFSATPLGNLINKSLDAQEKQDKTITLAGDARKQARGAVDEAMTSLRLLPSY
                     LRDPLIRHLSFLRKKQEADRRKGKKSWQAERYARGTLRKIFVRLDRTDSRWLTPGYRS
                     LAGRERLDDLLYLPQLNKHQIQTLATMTAAMFSSTFEKLCDGFGATDGELTMDVTLKA
                     YQMLARMALHLHAMPPHYDALTTDKDRRNEPDTELLPGAILRLTCAEWWKRKLWLLRC
                     EWREEQLRAACLVSRKTSPYLSQDALSEFRAQREKTRDFLKSFMLENEDGFTIDLETV
                     YYAGVSNPVHRKAEMMATMKGLELLAEARGDRAVFLTITCPSKYHATTENGHPNPKWN
                     GATMRDSSDYLVNTFFAAVRKKLNRDGLRWYGIRTVEPHHDGTVHWHMMVFAHPEEID
                     TIVSHTRDIAIQEDRHELGDDITPRFKAEYVDGSKGTPTSYIATYIGKNLDSRAVDGI
                     DPKTGKPRVDHETGKSMAESVERAIGWARLHRVRQFQFFGIPSRQVWRELRRLASQMA
                     RNPEGPQRLKDDAMDAVLAAADAGCFATYIEKQGGVLVPRKDYLIRTAYDLADELNDY
                     GEQSVQIYGIWSPLIGESSRVCTHPDNWMLVRRKPEAEDSTRENGFDLQGGPAAPWTR
                     GNNCPRVQETGNNGTEQPEERPAPWPQIPDGVEVNEWMRSLKRHERRALMRSLRDKQA
                     KNSSDEMQSWTQSRKQQRPLPDNHELLAKEWRESAESLGLHIGEQQMQHLLRGGSLYV
                     DGSIIAPQGFEIVRKPDTRPDSRITQLWQRLSRNHGVSSTEIRHNPAASYLEQLGASD
                     PEAAARLASTLQQDQNTMKTPVTVLSDMLRAIRDAEHAQRISETTERARRKADLLRGG
                     LTSGNKKQTETGFTNPVNEQKTRRDI"
     gene            complement(36160..36525)
                     /locus_tag="RHX79_000403"
     CDS             complement(36160..36525)
                     /locus_tag="RHX79_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195619.1"
                     /translation="MILANDFLEYLLNTERDLAARVRDRYDMYLKSLPVPQLADGKIV
                     IDGRYMIDSHEGNYRLSRIEGGTPSVIGIYQRPSSAIVDVIADSIRITHRHADTEDTV
                     LEIQRLATVCRDTLNGMTK"
     gene            complement(36522..37142)
                     /locus_tag="RHX79_000404"
     CDS             complement(36522..37142)
                     /locus_tag="RHX79_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001116808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HDV2195620.1"
                     /translation="MPFSQKNRLPCRNQSGYISAAPHKTGAGFRSLLTTKAHNRASGF
                     FVRTVLPRLFRTRIMAGRTGPTSVGPGSLVAGTANPVRLATHSFAALDGEFSKLTTKE
                     ATPWQTANSTALSRSVVTSRLKSTADFPAHSASLKSCTSICCMSVAANFQTSTHPLFS
                     VIWRMICASFSSSSSSKTNSINSCSGPFLHLAAGGLRTSVTRGLPQ"
     gene            complement(37198..38022)
                     /locus_tag="RHX79_000405"
     CDS             complement(37198..38022)
                     /locus_tag="RHX79_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HDV2195621.1"
                     /translation="MKKLLPLIPLLMTTLLVGCDRVEPGNVGIKVNKLGDDKGVGEVV
                     GVGRYWTGWNTEVYIFPTFKQMKTYDEPFNFQMSDGTTIGYHIGVAYKVDPSKVTTVF
                     QTYRKGVDDITDTDLRQKIADALNRLASKMTTDKFIDGGKSELLDSALKDIQSEMTPI
                     GIQVMSLSYVGKPEYPPTVIDSINAKVTANQKTLQREQEVKQREAEANMLRAEAAGQA
                     DAIRTKAQAEADAIRLRGEALRQNPGVMELEAINKWNGTLPQYMTSNTAVPFVPVK"
     gene            complement(38019..38231)
                     /locus_tag="RHX79_000406"
     CDS             complement(38019..38231)
                     /locus_tag="RHX79_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001555462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195622.1"
                     /translation="MNKKTWFRAYMWALVCVLVSLILYVGLLPRMISSDSSFLVLLGI
                     FVALLYPAGVVRFFSNYIKAIMETKQ"
     gene            complement(38243..38542)
                     /locus_tag="RHX79_000407"
     CDS             complement(38243..38542)
                     /locus_tag="RHX79_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HDV2195623.1"
                     /translation="MSTINHQKLRELAFALQRMATPQKLLAFRAMLSPSAVLALLDEL
                     EHARTMSPAIRLTLHHEIADFCAPLGSPGEPETPETMQRELLQRIDKVFDFFLNQ"
     gene            complement(38539..38805)
                     /locus_tag="RHX79_000408"
     CDS             complement(38539..38805)
                     /locus_tag="RHX79_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000153698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDV2195624.1"
                     /translation="MTILDYIATHPGCSGGEIAAALNTPTTAINAELRQLWRGGLVIR
                     TNRSTGGRARKTGGQASYHVNPMPFGCSNPLTHMFNQLLKEART"
     gene            complement(38802..39005)
                     /locus_tag="RHX79_000409"
     CDS             complement(38802..39005)
                     /locus_tag="RHX79_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195625.1"
                     /translation="MAIKHFPVVRFTSRGREYEVDERLITTIDKHRSEKDAHHIYLTD
                     GTYFCATNVARVNLIRQVQEPRR"
     gene            complement(39029..39439)
                     /locus_tag="RHX79_000410"
     CDS             complement(39029..39439)
                     /locus_tag="RHX79_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001376666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195626.1"
                     /translation="MHAKEEGIIRALKEISKTENEVAKKAIANNHMDVATHTLIVARV
                     TAEAAEIIAKQDAELAVLRTQPVTGLDLSNTGRLIYTIGSELQRYTIIAGLQDKYLIT
                     PHPIRESEILTNLRLIERSQVAFIDDAQCTVFNA"
     gene            complement(39533..39646)
                     /locus_tag="RHX79_000411"
     CDS             complement(39533..39646)
                     /locus_tag="RHX79_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195627.1"
                     /translation="MSIFISWLVLIISVACAIGIMRIIHSVKKIERFFTGE"
     gene            complement(39643..39885)
                     /locus_tag="RHX79_000412"
     CDS             complement(39643..39885)
                     /locus_tag="RHX79_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4754 family protein"
                     /protein_id="HDV2195628.1"
                     /translation="MGKEYKTLINKALERFYFRLSASGAHAERAARDSLTRAIRSLYD
                     VAFYADDLDALNELSELICAAECGEHIEPYKLGNIA"
     gene            complement(39897..40184)
                     /locus_tag="RHX79_000413"
     CDS             complement(39897..40184)
                     /locus_tag="RHX79_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195629.1"
                     /translation="MTKDHAQGVFIRFIDFRGELLLRASAIDGVTPAGKNGADEATYV
                     YLNGTRLLVELPYQTVREIISEAEKARQVNGDEPYIEIICMDSEAEIQKAD"
     gene            complement(40195..40536)
                     /locus_tag="RHX79_000414"
     CDS             complement(40195..40536)
                     /locus_tag="RHX79_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4761 family protein"
                     /protein_id="HDV2195630.1"
                     /translation="MKQQRNSRFRNGAERHANRFATSASRSNIRYSLSDTHATPDGYP
                     VKQIGEHAWLIEKAGIVIHKCPRNPFTGNRIFALSCGDNQFGQDFTLYEALRTVARLL
                     RGQSFIKQADL"
     gene            complement(40555..40881)
                     /locus_tag="RHX79_000415"
     CDS             complement(40555..40881)
                     /locus_tag="RHX79_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001001394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195631.1"
                     /translation="MNEELLRALFKIPDPITVDEFSRRTGKTESAVRKLVERRLIPLT
                     TEREVLGEEGSSRRLLILWNEWLEMVYDATKQLPPERKDWRNHWLKKAKKLAEDLGLG
                     FLNFAA"
     gene            40977..41279
                     /locus_tag="RHX79_000416"
     CDS             40977..41279
                     /locus_tag="RHX79_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001242988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2195632.1"
                     /translation="MRMTIGERIKIMRESERLTSLPDTAKMLGLNRDALWRYESGKTI
                     PNAEVIEQILNNPRFEKYALWFMTGKIAPESGQIAPALAHYGQEPTDLPPSERKIG"
     gene            41346..42335
                     /locus_tag="RHX79_000417"
     CDS             41346..42335
                     /locus_tag="RHX79_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003805948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDV2195633.1"
                     /translation="MAIKALDGGRYKVDVRPRGRSGRRIQRIFKKKADAVAFERYVLS
                     HMHDKEWLEKPTEQRHLSDLLPLWWELGGRNKPYANGVLTRLKKIIKEMNDPRVSQIN
                     ARFMAAYRSSRLSLGVKESTVRRDESDLGGMFTLLANAGEFHGENPLRALPSLKRKSP
                     EMTYLTMEEIAKLLDAVSGDARRITLLCLSTGARWGEAKNLRAEHIINNRVTFNKTKN
                     GKVRIIPVSDEVVSEIKTKKSGLLFDVNYEEYRKVLRSVKPDLPKGQAVHVLRHTFAA
                     HFMINGGNILTLQRIMGHATIQQTMTYAHLAPDFLQDAISLNPLKGGIHISST"
     misc_feature    42502..42627
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01859"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Phe leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01859"
     gene            42503..42550
                     /gene="pheL"
                     /locus_tag="RHX79_000418"
     CDS             42503..42550
                     /gene="pheL"
                     /locus_tag="RHX79_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pheA operon leader peptide PheL"
                     /protein_id="HDV2195634.1"
                     /translation="MKHTPFFFAFFFTFP"
     gene            42649..43809
                     /gene="pheA"
                     /locus_tag="RHX79_000419"
     CDS             42649..43809
                     /gene="pheA"
                     /locus_tag="RHX79_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydratase"
                     /protein_id="HDV2195635.1"
                     /translation="MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHR
                     PVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPH
                     SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIEN
                     TSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSK
                     FLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQQQN
                     FTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIH
                     GNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT"
     gene            complement(43852..44973)
                     /gene="tyrA"
                     /locus_tag="RHX79_000420"
     CDS             complement(43852..44973)
                     /gene="tyrA"
                     /locus_tag="RHX79_000420"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HDV2195636.1"
                     /translation="MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPI
                     YVPEREASMLASRRAEAEALGVPPDLIEDVLRRMMRESYSSENDKGFKTLCPSLRPVV
                     IVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG
                     KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
                     KPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
                     LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLEQG
                     DKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ"
     gene            complement(44984..46054)
                     /gene="aroF"
                     /locus_tag="RHX79_000421"
     CDS             complement(44984..46054)
                     /gene="aroF"
                     /locus_tag="RHX79_000421"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroF"
                     /protein_id="HDV2195637.1"
                     /translation="MQKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRRTI
                     SDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
                     VGWKGLINDPHMDGSFDVEAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSW
                     SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQ
                     VALLQTQGNPDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
                     RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWE
                     MTDALLREIHQDLNGQLTARVA"
     gene            46264..46629
                     /locus_tag="RHX79_000422"
     CDS             46264..46629
                     /locus_tag="RHX79_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2799 domain-containing protein"
                     /protein_id="HDV2195638.1"
                     /translation="MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISG
                     SAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQ
                     LHEVWQKGADENASTIRLN"
     gene            46779..47297
                     /locus_tag="RHX79_000423"
     CDS             46779..47297
                     /locus_tag="RHX79_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HDV2195639.1"
                     /translation="MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTR
                     WPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESP
                     TFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP
                     DVLMLARKKNDG"
     gene            47287..48513
                     /gene="dgcN"
                     /locus_tag="RHX79_000424"
     CDS             47287..48513
                     /gene="dgcN"
                     /locus_tag="RHX79_000424"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcN"
                     /protein_id="HDV2195640.1"
                     /translation="MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLT
                     LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNIL
                     ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSL
                     AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH
                     RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA
                     RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEVGGLRHKAYRLGGDEFAMV
                     LYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELAD
                     HNMYQAKHQRAEKLVR"
     gene            48529..49011
                     /locus_tag="RHX79_000425"
     CDS             48529..49011
                     /locus_tag="RHX79_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDV2195641.1"
                     /translation="MIKHLVAPLIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAG
                     DWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNE
                     GLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP
                     "
     gene            complement(49088..49435)
                     /gene="rplS"
                     /locus_tag="RHX79_000426"
     CDS             complement(49088..49435)
                     /gene="rplS"
                     /locus_tag="RHX79_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012768745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDV2195642.1"
                     /translation="MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRE
                     RTGKAARIKERLN"
     gene            complement(49477..50244)
                     /gene="trmD"
                     /locus_tag="RHX79_000427"
     CDS             complement(49477..50244)
                     /gene="trmD"
                     /locus_tag="RHX79_000427"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDV2195643.1"
                     /translation="MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHD
                     RHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSEL
                     ATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVL
                     GHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWL
                     RRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA"
     gene            complement(50275..50823)
                     /gene="rimM"
                     /locus_tag="RHX79_000428"
     CDS             complement(50275..50823)
                     /gene="rimM"
                     /locus_tag="RHX79_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HDV2195644.1"
                     /translation="MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDY
                     QPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLE
                     EGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLD
                     GQVIKKVDLTTRSIEVDWDPGF"
     gene            complement(50842..51090)
                     /gene="rpsP"
                     /locus_tag="RHX79_000429"
     CDS             complement(50842..51090)
                     /gene="rpsP"
                     /locus_tag="RHX79_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000256453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDV2195645.1"
                     /translation="MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIAS
                     EKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA"
     gene            complement(51227..52588)
                     /gene="ffh"
                     /locus_tag="RHX79_000430"
     CDS             complement(51227..52588)
                     /gene="ffh"
                     /locus_tag="RHX79_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDV2195646.1"
                     /translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVA
                     LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAV
                     VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
                     PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
                     FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
                     EKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDF
                     LEQLRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPE
                     IIKGSRKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
                     PGR"
     gene            52755..53546
                     /locus_tag="RHX79_000431"
     CDS             52755..53546
                     /locus_tag="RHX79_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417102.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HDV2195647.1"
                     /translation="MPVFALLALVAYSVSLALIVPGLLQKNGGWRRMAIISAVIALVC
                     HAIALEARILPDGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALI
                     NLALATFMPNEYITHLEATPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKL
                     AFNQEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSMENIDKAVLSIVAWF
                     VYIVLLWGHYHEGWRGRRVVWFNVAGAVILTLAYFGSRIVQQLIS"
     gene            53567..54853
                     /locus_tag="RHX79_000432"
     CDS             53567..54853
                     /locus_tag="RHX79_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026171.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDV2195648.1"
                     /translation="MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQ
                     GNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLT
                     FVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIK
                     TDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGID
                     INDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAA
                     DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMS
                     PTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGT
                     RVHIGEYDIDILEVQDNMIKQVKVFPVKPLRESVAE"
     gene            complement(54908..55501)
                     /gene="grpE"
                     /locus_tag="RHX79_000433"
     CDS             complement(54908..55501)
                     /gene="grpE"
                     /locus_tag="RHX79_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDV2195649.1"
                     /translation="MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKI
                     ANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSL
                     DRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMV
                     ESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA"
     gene            55624..56502
                     /gene="nadK"
                     /locus_tag="RHX79_000434"
     CDS             55624..56502
                     /gene="nadK"
                     /locus_tag="RHX79_000434"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDV2195650.1"
                     /translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIA
                     HELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLT
                     DLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI
                     EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
                     RPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
                     YFNTLSTKLGWSKKLF"
     gene            56588..58249
                     /gene="recN"
                     /locus_tag="RHX79_000435"
     CDS             56588..58249
                     /gene="recN"
                     /locus_tag="RHX79_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HDV2195651.1"
                     /translation="MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGL
                     CLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGR
                     SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMT
                     ARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLA
                     NSGQLLTTSQNALALMADGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQ
                     IAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQ
                     QLDDQADSQETLALAVTKHHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQ
                     FTIDVKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALAIQVITARK
                     METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKE
                     TDGAMTETHMQSLNKKARLQELARLLGGSEVTRNTLANAKELLAA"
     gene            58398..58739
                     /gene="bamE"
                     /locus_tag="RHX79_000436"
     CDS             58398..58739
                     /gene="bamE"
                     /locus_tag="RHX79_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417107.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HDV2195652.1"
                     /translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVS
                     KIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLT
                     NIDNKPALSGN"
     gene            complement(58801..59091)
                     /locus_tag="RHX79_000437"
     CDS             complement(58801..59091)
                     /locus_tag="RHX79_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417108.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HDV2195653.1"
                     /translation="MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRT
                     DIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK"
     gene            complement(59081..59518)
                     /gene="ratA"
                     /locus_tag="RHX79_000438"
     CDS             complement(59081..59518)
                     /gene="ratA"
                     /locus_tag="RHX79_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010376629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin RatA"
                     /protein_id="HDV2195654.1"
                     /translation="MPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTP
                     GQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRI
                     EFHLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYSAR"
     gene            59689..60171
                     /gene="smpB"
                     /locus_tag="RHX79_000439"
     CDS             59689..60171
                     /gene="smpB"
                     /locus_tag="RHX79_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDV2195655.1"
                     /translation="MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSL
                     RAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYG
                     RVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
                     "
     gene            60386..60748
                     /gene="ssrA"
                     /locus_tag="RHX79_000440"
     tmRNA           60386..60748
                     /gene="ssrA"
                     /locus_tag="RHX79_000440"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(60909..64170)
                     /locus_tag="RHX79_000441"
                     /pseudo
     CDS             complement(60909..64170)
                     /locus_tag="RHX79_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311542.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AIDA repeat-containing protein"
     gene            complement(64235..64354)
                     /locus_tag="RHX79_000442"
     CDS             complement(64235..64354)
                     /locus_tag="RHX79_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001131457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HDV2195656.1"
                     /translation="MLLSYVEYHHFIMMSLMSGEHNTLALSLQDESPGLVPVG"
     gene            complement(64440..64697)
                     /locus_tag="RHX79_000443"
     CDS             complement(64440..64697)
                     /locus_tag="RHX79_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA invertase"
                     /protein_id="HDV2195657.1"
                     /translation="MDARVVCKPNRLGRSMWHLVVLLEELCKRGINFRALAQSIFAQQ
                     WGDECCKSKRICDLKVIVLFLCEQKIFIRNDYVNHFILPTA"
BASE COUNT        15122 a        17023 c        16128 g        16740 t
ORIGIN      
        1 tttttgcttt ctctgccgga attctcagga gaaccccgct gacccggcgg cgtgtttgcc
       61 gttgttccgt gtcagtggtg gcgcattata gggagttatt ccggcctgac aagcgaaaaa
      121 tataaaaact ttatcgttcg ctcatttttc aggcaaaaca tcttaaatat agtcttttcc
      181 gtctaactta tagacaaaaa cgagccccga agggctcgtt ttatcattta ctggacggcg
      241 acaatccggt cttcattaac ttccaggcga atcactttac ccggaaccaa ttcaccagac
      301 agtatttgct gtgccagcgg gttttcgatc tgctgctgga tagcacgttt caaaggacgt
      361 gcaccataga ctggatcgta accgttctcg ctcagcagtt tcagcgcctc gtcagaaatg
      421 tggatttcat aaccacgttc ttccagacgt ttgtacagac gtttcaactg aatctgcgca
      481 atcgaggcaa tgtgctgttc acccagcgga tggaagacca ccacttcatc aatacggtta
      541 atgaattccg gacggaagtt atggcttacc acaccgagca ccagctcttt catgtgcgca
      601 taatccagtt caccgaagcg ttcctgaatc aaatcggaac cgaggttaga ggtcataatg
      661 acaaccgtat tacggaagtc gaccgttctc ccctgcccgt cagtcagacg accatcatcc
      721 agtacctgca acagaatgtt gaagacatcc ggatgcgctt tttccacttc atccagcagg
      781 atgacggaat acggacgacg acgcacagct tcggtcaggt agccaccttc ttcataaccg
      841 acatatcccg gaggcgcacc aaccagacga gacaccgagt gtttctccat aaactcggac
      901 atatcgatac ggaccatcgc ctcgtcgcta tcaaacataa agttcgccag cgccttacaa
      961 agctcagttt tccccacacc cgttgggccg aggaacagga atgaaccaat cgggcgattt
     1021 ggatccgcca accccgcacg gctacggcga atagcgttag ataccgcatc aaccgcttcg
     1081 ttctgaccaa tgacgcgatg gtgcagttct tgctccatac gcagcagttt ttcgcgctcg
     1141 ctttccatca tgcgagaaac cggaatcccc gtccaacgcg ccagcacttc agcaatttcg
     1201 gcgtcggtca ctttattacg caacagacgc atagttttgc cttcgagctg cgttgcggct
     1261 tccagttgct tttccagttc cgggattttg ccgtattgca gttcagacat ccgcgccagg
     1321 tcccccacac ggcgagcctg ttcaatagcg attttcgcct gttccagttc cgctttaatg
     1381 gtctgcgtac cagaaagcga tgccttctct gctttccact cttcttctaa ctcggagtac
     1441 tgacgttctt tgtcgctcag ttcttcgttg agcatatcca ggcgtttttt actggcttca
     1501 tcagactctt tcattaacgc ctgttgttcc agtttgagct ggatgatacg acgatcgagt
     1561 cggtcgagtt cttctggttt tgagtcaatc tgcatacgaa tgctggatgc tgcttcatcg
     1621 atcaggtcga tggctttatc cggcagctga cggtcagcaa tgtagcgatg agacaacgtc
     1681 gccgctgcaa caattgccgg gtcagtaatt tgcacatggt ggtgcaattc gtaacgttct
     1741 ttcaggccac gcagaatcgc aatggtatct tcaacagaag gctcggcaac aaacactttc
     1801 tggaaacgac gttccagcgc agcatctttt tcgatgtact ggcgatattc gtcaagcgtc
     1861 gtggcaccta cgcagtgcaa ttcaccacgc gccagcgccg gtttcagcat gtttccggcg
     1921 tccattgcgc catcggcttt acccgcgccg accatggtat gtaattcgtc gataaacagg
     1981 atgacgttgc cttcctgttt ggcaagatcg ttaagcacgc cttttaaacg ttcttcaaac
     2041 tcaccgcgat atttcgcccc agccaccagc gcgcccatat ccagcgccag tacgcggcgg
     2101 cctttcaatc cttccggcac ttcgccgttg ataatacgct gcgccagacc ttcaacgatg
     2161 gcagttttac cgacgccggg ttcaccaatc agtaccgggt tatttttagt acgacgttgc
     2221 agcacctgaa tggtacggcg aatttcttca tcacgaccaa tcaccggatc gagtttgccc
     2281 tgttcggctc gttcggtaag gtcgatggta tattttttca aagcctgacg ttggtcttca
     2341 gcaccttgat cgttcacgct ttcacctcca cgcatttgtt caatcgcttg agtaatgttg
     2401 gcggtggtcg cccctgctgc tttcaggatg tcggccagcg tgccgcgaga ctcaagtgcc
     2461 gccagaacga acagttctga cgagataaag ttatcaccac gtttttgcgc cagcttgtcg
     2521 caaagattaa gaacgcgcac cagatcctgt gatggctgga catcaccacc agtaccttca
     2581 acctgcggta aacgatttaa tgcctgattg atatctgtgc gcaactggcc agcatttatg
     2641 ccagcggatg ttaataaagg actaaccgaa cccccttcct gattcagcag ggcgctcatt
     2701 aaatgaagtg gttcgataaa ttggttgtcg tgcccgagtg caagtgattg ggcatcggca
     2761 agagcaagct ggaatttatt agtaagacga tccagacgca taactcctcc cataacggat
     2821 caaagttgct actggagatt aaatgaggtc atccctcaat tattcaaggt tattgaccag
     2881 attaatgtga aaagaaaatc acgcgtaccg gatcgtcttg attctttagg ttatatcagc
     2941 caaatgaaac ttgccatacg accggtggtc ttgtcgcgac gataagagaa gaaagtctca
     3001 ttttccgtat atgtacaacg gtcgccgccg aaaatttgct caacacccac gttcgccaga
     3061 cgctgccggg caagctgata aatatccgcc agatacttat caccatgctg aatgaaagct
     3121 gcacttgctt tagcgtctac tgccataaac gcctcgcgaa cctccgcccc cacttcgaac
     3181 gcgcgtggac caattgccgg ccctaaccag gcgagaatgt tttcaggttt atcagcaaaa
     3241 caggaaaccg tctcttccag cacgcctgcg cacagtccac gccagccagc atgagcggcg
     3301 gcgacttccg ttcccgctcg attgcaaaac agcacaggga ggcagtcggc agtcatcact
     3361 gcgcaaaccg tgccaggcgt attgctataa gaggcatctg ctcgttttga ggcataaggt
     3421 tcgccagtaa gcttaagcac atctttgccg tgtacctgct caagccagac cggtttagaa
     3481 ggcaaattgc ccgcagcaaa aagtcgcttg cgattctcct caacgtgatc cgggttatcg
     3541 ccacaatggg caccgaggtt gagtgagtca tacgggggca agctcacgcc gccgatacga
     3601 gtggagctac aggccgcaac accttttggc agcggccact gcgggacaat cagcttactc
     3661 ataaccagtc cacttcatcc ttatgctctt cgaaatcggc gcgcatcacc tcaatcagct
     3721 ccaccatatc ttgtggaata ggcgcatgcc attccatttc gatgccggag atcgggtgat
     3781 aaagacgcag catggttgca tgaagcgcct ggcggtcaaa cttacgcagc gtggagataa
     3841 atgcttccga agcacctttt ggcggacgcg gacggccacc ataaaccgga tcgcccacca
     3901 gcggatgagt gatatgggcc atatgcacgc ggatctggtg cgtacgtcca gtttccagac
     3961 gcaaccgcag acgcgtgtgc acacggaagt gttccatgat gcgatagtga gtcaccgccg
     4021 gtttgcccat cggatgcacc gccatgtgag tacgtttggt cgggtggcgg ctgattggtt
     4081 catctactgt accgccagcg gtcatatgac caattgccac cgcttcatac tcacgagtaa
     4141 tttcacgcct ttgcaaagat tcgactaaac gcgtctgagc cggaacggtt tttgccacaa
     4201 ccatcaggcc agtggtgtct ttatccagac gatggacgat gcccgcacgt ggtacatcgg
     4261 caatgggcgg atagtaatga agcaacgcat tcagtaccgt gccatccggg ttacccgcgc
     4321 caggatgtac caccaggtcg cgcggtttat taatgacgat gatatcttca tcttcataga
     4381 cgatatccag cgggatatcc tgcggttcaa aacgcgcttc ttcttcaatc tcagcgttga
     4441 tggcaacctg ctcgccaccc aatacttttt ctttcggctt atcacaaact ttgccgttta
     4501 ccagcacgcg ctggtcgagg atccattctt ttattcgcga acgtgaataa tccgggaaca
     4561 tttcggccaa agcctgatct aagcgttgac cgagttgatt ttcggacacc gttgcagtga
     4621 gctgtactcg ttgtgccata tatactgctt cttcgtttat cgttggggtt ttacggcttt
     4681 gccgtttaat atagtgtgct attgtagctg gtcttaaccg ggagcaggaa cagagaatct
     4741 cccgtattac attttgagga aagtcaaaac gtcatgacgc gcatgaaata tctggtggca
     4801 gccgccacac taagcctgtt tttggcgggt tgctcggggt caaaggaaga agtacctgat
     4861 aatccgccaa atgaaattta cgcgactgca caacaaaagc tgcaggacgg taactggaga
     4921 caggcaataa cgcaactgga agcgttagat aatcgctatc cgtttggtcc gtattcgcag
     4981 caggtgcagc tggatctcat ctacgcctac tataaaaacg ccgatttgcc gttagcgcag
     5041 gctgccatcg atcgttttat tcgccttaac ccgacccatc cgaatatcga ttatgtcatg
     5101 tacatgcgtg gcctgaccaa tatggcgctg gatgacagtg cgctgcaagg gttctttggc
     5161 gttgaccgta gcgatcgcga tcctcaacat gcacgagctg cgtttagtga cttttccaaa
     5221 ctggtgcgcg gctatccaaa cagtcagtac accaccgatg ccaccaaacg tctggtattc
     5281 ctgaaagatc gtctggcgaa atatgaatac tccgtggccg agtactatac agaacgtggc
     5341 gcatgggttg ccgtcgttaa ccgcgtagaa ggaatgttgc gcgactaccc ggatacccag
     5401 gctacgcgtg atgcgctgcc gctgatggaa aatgcatacc gtcagatgca gatgaatgcg
     5461 caagctgaaa aagtagcgaa aatcatcgcc gcaaacagca gcaatacata acagaaacct
     5521 gaaatacaaa acggcagccc ttgagctgcc gtttttttat tctgttagtt gtgaaactga
     5581 agcgatttag tcactatcga tctcatcaaa tatggctcgc tttgagatat tcctcaagta
     5641 aaaaaacacc tcttcctgcg atttctcaca aaaaagattc gttgacaaaa agtgacaaaa
     5701 ttatgagatt cccatcacac attttgacat caggagcggt atgctgaatt caccaagacg
     5761 ggaagacaag aggtaaaatt tatgacaatg aacattacca gcaaacaaat ggaaattact
     5821 ccggccatcc gccaacatgt cgcagaccgt ctcgccaaac tggaaaaatg gcaaacacat
     5881 ctgattaatc cacatatcat tctgtccaaa gagccacaag ggtttgttgc tgacgccaca
     5941 atcaatacac ctaacggcgt tctggttgcc agtggtaaac atgaagatat gtacactgca
     6001 attaacgaat tgatcaacaa gctggaacgg cagctcaata aactgcagca caaaggcgaa
     6061 gcacgtcgtg ccgcaacatc ggtgaaagac gccaacttcg tcgaagaagt tgaagaagag
     6121 tagtccttta tattgagtgt atcgccaacg cgccttcggg cgcgtttttt gtaaagctaa
     6181 caaattgttt ctattagctt atttcttgta aacatccaca aactgtccac atcagtaagg
     6241 atagacaagc ccgcaaaaaa atgcgggctt tgtcttatgt agtcgaaatg gttgtggtaa
     6301 tagtcccccg aagccgctgc gctgctacct caaaataatg atcactggtt tctataccaa
     6361 taaattttcg ccctgctttc agtgcagcca cacccgttgt tcctgacccc ataaagggat
     6421 caaggactgt tccgccacta ttcgcagttc tgaccagctc tgccattagt tcttctggtt
     6481 ttccggtcgg gtgcattttc tttgacggga taaccgggaa cgtcatgcag ccgtcgaacg
     6541 gccccgaagg cgatttatct aaatggcctt tgctgcccca gacaatgtat tcgcactgat
     6601 gccggaaata cccggtatgg ggtgttcgtg accccctccc cttgttccac gcaatgatgc
     6661 cgcgccatgt aaagccactg gcctgaaacg catcggttaa agctggtagt tgtcgccagt
     6721 cagtaaatac cagggcataa ccgcccggcc tgactgcgcg gtgtgcctgt gccatccata
     6781 attgtgtcca gtaagcccac gaacgggcgt ccatgttttc acccgcgaac ccatcaaagc
     6841 ggtgaaggtt ctcgccgttc agatattttg catggctgcc ctggttggtg cgtccggcct
     6901 tgtgtgtcgc acccgaactg taaggtgggt cagtgattaa ggcatcaatg ctttctggct
     6961 caatcagcgg caatatttcc agcgcattcc cacgacagag cgtggcattg tcagtctgat
     7021 aaaccttggt gtgttccggt gtatgtgctg gttggtgctg gattgcgatc cccacggtca
     7081 taactcctca tgtgtgtggg gtgctcaatg gctctcgtta tctggttaag tgttttgcag
     7141 cgcggacatt ttatttcaat gtagtgaaat gaggcgcggg caagtagttt gttgcaattt
     7201 ttgcatcgta cattttgcgt catttgcggc acctcttgtg tggttactgc tgccgatatg
     7261 ataacaaatc gatcgttttt atcgatcgga tttattgcat cgatctgtca tgcctattgc
     7321 ttacgaatag tgtcaccctc atttgtgagg gcaacaaaaa gaaaacccgc agtttttacg
     7381 ctgcgggttt gttgttcatg tctgtgagat agggtgccac ttcagccaac cttagcaacc
     7441 gattgacgga ggattactcc cccgtcgcgg tttccttact gcttacactg taagaacgcc
     7501 gcaaactccg ctccccagaa gctcatccgt atctcgcaca gcgaaccgtg cagcatccag
     7561 atgatgagga ttgccgtcac gcagaacgtg atggctataa gcgatttttg cgacatagca
     7621 cttgctcctt tttttgcaaa ggcgctaagc tcttgcccgc ttattgatta cgttgtgaaa
     7681 cgcccagagt tgaacataag gtttagttgg gcctttttac atctggcctt cgtgtttgct
     7741 gtccagccat cagtcgaaag gtgtccgcgt gaattctagc ctgctttttt ttcttgcttc
     7801 aatacgttga ctaatttcaa cactctgttg tgcatatcct gaacgcagac attattcagt
     7861 cacgcatttg atacatgctt ccgccggcgt tcgcgccggt tttttgtcct gttattgcgt
     7921 agatcgtcat gcgcaatcaa ggcgcggcat tgatcctttt ttcagtttaa ttctggctct
     7981 tgattttacg caggccgcgc cgcgtctggc ttctttgttt gatggttgtt tgatgcgatc
     8041 ctttagtgat cgtttttcgt ctcgcgtaaa gtatgaaaac tcttttaata tcatgctgtt
     8101 ttattgttcc taccatttgt gcgatcgtaa aaaccactct gaaaactgaa aaaaatttca
     8161 aagtgtgaaa tttcagatct tcgcttttcc ctcagttgct gcgcgggctg gcggtcattt
     8221 ttgcacggca gaaaactgaa aaactgtttc gacacaaaac ccgcgggttg gagggggtag
     8281 cgcggtttac gtcacctcac gctttacgtc acaccgttta cgcggtgtgc gcatacagcg
     8341 ccagaatggc acgcagaacg cattaatcag gtggcagata tgaaaacgca cgaccggagc
     8401 cgtgcgttgc gtgatgggcg tttatggggg ggtatgcccg gtgatcaggc gataaggtca
     8461 ccgtattttt cgcgcaggct cgtagcctgt ttggcgtctg cggcaagttc gctgttgttt
     8521 gttggtgcgc cggtgttgct gtgggtgtgg tttgcagtgt gtgtggccag caactgaacc
     8581 agatccagaa tatcaatcaa caacgtcagc agattaagtc cggatttttc ccgtgagcca
     8641 ccgcgaccaa taaatactgt cggggctgta aactccagac caccgtccgc ccggcatgtt
     8701 ctgcggcctc ccacgttttc agtaaggtcg cgctcaatcg tggatgtcgc ccctttgagt
     8761 ttagtcagca aatcctgcgc taccatctgg atatgctcac cggctgcgat cgcataatga
     8821 ccagtagtaa tgtgttctgt ctggcctgtc atcagcttgc tggttcccag aacgctggtt
     8881 atgtcgtttg cctgtactgt tgttgttctg gttgttgttg tgcgttcttc ctgatcgctg
     8941 ttaatggttc gtctggctga atgctccctg atttgctgat cggtttctct gtgccagctt
     9001 ccgtcagtcg tgacgcgctg aaacacttct gcgcgctgtt gctgcagctg ttcgccgggc
     9061 tttacatcag gcaggttatg gccagcgggt aagatttgcc tgataacggg tttgtccgga
     9121 cgtccttcaa tgttggatat ttccacgatg gtgcctgccg gtgggtaggc aaaacatccc
     9181 gcctcactgc cagccatggg gacggggagc ggtactgccg ggtaaacggg cgtgtcgctt
     9241 ttatcgttgc cgttctcatc aagcaactgc acatcgacgg cgtagcgtgg gcggaaactg
     9301 tcggccacgt cgcccagggt ggtgggctcc gttggcgcaa tgacgcgcgc cagccgggta
     9361 tgtagcgtac cgctggccag ttctgggaac tgtgtttcca tttgtctgcg taatggtgat
     9421 ttggaaacag gggtacccgt ggcggtaagg cgctcccatg tcagggtcat tttctcgttg
     9481 ttgagggcta cacgggtaat gcgcccggcc ggtaggttca cgcccggtcg cacagtttcc
     9541 ataaacatga tgtcgatgct gtttccgccg ctttgcccga gtgtgtactg ttgcggaata
     9601 tccggcattg taatactggc aaatcgtgaa tcagctgcgc ttcccacaaa tacagaaccg
     9661 tccggcatag ggtgccagac gtaatcgctg atactgaatg ctcgccccag ttggctgagc
     9721 agttgtgctc cgctgccgct gtgggtgatg tagggagttg gtatactggc ataatccgca
     9781 tccggagtga taaaaacgat accgctttgt cgccccagat tatcgagtac cccccgcaac
     9841 gtcgggtgtt gcatggagca agggaaatca aaatccagca cagcagccgc ttcacgaata
     9901 aaaaggcgac gtgagccatt ttcagcaggt tgatcgcgct caatgtagcc ggagaaatag
     9961 cgccatgctt caccgtcacg gccgagatca atttgtacca ttgcgccggc aaggctgtgt
    10021 tcgggtgaca gattgttaac agaaatgaag ccacgaccgg cagcattcag ggtaagaaca
    10081 aggcttatat cggcaatttc cacccgttcg ccattaatca tgcagcgttg tatcaatttc
    10141 atgttttccc ttcctctttc acgctcccga tgccaacagc atccagacca gagccaacgg
    10201 catcattgat ttttttccag aacgaacttt gcgtattcat gcctttgtct ggtacctgtt
    10261 cgctgccatt ctgggtctgc tgtctggcga tggttttctg cgaaccgctg cgtgcggatg
    10321 ctttctctgg cacgcttaat ttttccctga gagtaaaggt gatctgccag tgcatttttc
    10381 cctgttgttc cgtggcatca atgccaccag aaaacacccc ctgtcgcata ttgattgcct
    10441 tcgcggtagc gttagcaatg cgatatgttt ttttagcacc gttgctttct gttgcctccg
    10501 caagctgaaa aatacgggtc agaatagctt catcgttaaa atcaataacc cccgacacgc
    10561 gcagctcttt agccttgttt ccctgctggg cgctcgtggt gctggttgac tgtccggaca
    10621 tatctttgtc cggtagttgc atggtggcgc tgacggtgat gttacgcagc agaatggctt
    10681 ccccgtcaag cgcaaggaca atcatctggg tcatgtagtg cttcccttag tgatgagaga
    10741 ttatcgccga cgaacagcat cactgctgta aaaacccact cggggtgtgg gatgtttttt
    10801 tgtatcagca ctgcagcctg gctaagggct cccttgtagc aaaagcgcca caccgggcaa
    10861 actttttgcc ggagtgcggc ctgctgatca gcgatttcct gtaaggcttt atctctcgca
    10921 ttcatgaact gatgcagcga tgatgacaat gtttccggtg atgtggcggc aggagtggct
    10981 gcctgtgcaa tggttgctgc cagcgacatg ctgcgagtgg tctgtgtcga cagcattatc
    11041 ggttccggaa gtgatgttgc cggtctggcg gggatttgca ttctgctgat ggccagtgaa
    11101 agttgactgg aaatcatgcg ggacattcgc cccacctctg gcaatggaaa tgcgcctgaa
    11161 aattgcctgg cgagtgataa aaactcgcca gcagaaggag cgcaaaacaa cagcgccaca
    11221 atgtcttttt ctgtgctttc tttcaggtag ggtaaaagtg cagatacagc attttcgggg
    11281 ctgagataac gccccgatgg tttgatgttt ccggtatttt ctgaccacgg atgaagacaa
    11341 accacagaac atttaatgtt tatggcagac ggacgtaaaa ttacctcttt ccatttcatt
    11401 ctgctttgcc cacctgaaat gccctaattg cagcaatgtt attcagtgtg gccagcgtgt
    11461 ttttcatctc acgctggcgc aggtaaatct catcgttgcg tgcagcctga gcctgcacca
    11521 ttgccgtaag tagttcttcc agcttttgtt gtgacaattt aatttgttgg ttatttgcat
    11581 cactccatac tgtggcattg tgtgccacac cagattttgc tgccatcact gccgggaata
    11641 agcgttccag tgaggatttt cctccattcc atgtgctgct gttccattcg aatgtgaacg
    11701 gctgcgcctc ctgttctgtt cgccagcgcc tgatttcctc ttttttcagt tctttttctt
    11761 tgtccagcat ctctgctgtt acagtgaagg ggatgatttc accaaactca ccgctcatca
    11821 gtgttcccca tacccgctgg cctgatgcag cagaatcatt ttccactgca cgataaggaa
    11881 tataatcagc ccgcccttca aacaacactt cacaggaaac agacccgtct tccaggtatt
    11941 tcatcgcctt tatgtcgatt attttcatta ttctgccctc atcaccaggc aaatccacca
    12001 ggcattggct ttattcccac agttcagact ctgactggag ccattcagaa taaaatagga
    12061 ccccggcaat aacccgtaca tcatcgatac gttgtaaacc gatgccgctg cgcacggatt
    12121 accattgttc tcaaacataa gcgatacatg ccgtaacttt tcgcctgata tcctgtcccc
    12181 acgcttatgt gaggcaaggt cagcgacaga tattgctgcc agtgtgactc cgtcaatccc
    12241 cgggtttccc cagaagtcag cagagcgtaa tcccttcgcg ctgagatttc cccagccagc
    12301 cagaccggct ccggcactgg tccatttcag ccagttgata aacatttctc ccttcttact
    12361 catgaaaata atgagcttgt ctgcacgcga ttgcgaagac gaggaggctg tatccggaat
    12421 aataatttca acaatccctt ccagacgatt ttccttgtca ataatctgag gcgcgctata
    12481 tgaagtaccg tctcctaccg cataccggcc cggtggtgta gtggataccc aggaaataaa
    12541 atcagcaggg ccgttttctc ccctgaaaat gactttgtct tcatgtcggt aatatcctcc
    12601 atatcccagc gtccccggaa tggccaccac gccttcgctg cggtcataaa tattattctg
    12661 tggcaccaca gtgtctgacc tttccagctc aagcactctg cgcatatctt ccggtgtggc
    12721 ctgtgccagc agtgaacggg cttctggcgt caaccgtgtc agcgatgcgt tcccgtccga
    12781 atcaaagtac agaagattat ctgcctgagc gtttaacctg ctgatggcgg ttaaaacatc
    12841 actaagtggc tgtttgcctg caagcgcgtt agtgaccgtc gttgcaaaat tcgggtcact
    12901 gcccagcgcc gctgccagct cattcagtgt gtcaagggct tccggagatg agccaaccag
    12961 tgcagcgagc agtttgcgga caaacgccgc gttcgccatc tccagcccga ccgcatcatc
    13021 cggtggggtt ggtgtggttg gcgtaccggt gaacgccggg ctgttcagcg gcgcgcgggt
    13081 ttcaatcagc gccctgagtg aagcctcgtt gactttcagg ttttcccagc cagtcagcaa
    13141 tccatttcct gtactccagt aacggttgta ataaatatca ccgttaatgc catagaaaat
    13201 aatggccttt gctgtatgtg gtggcagagg tgtggagcgt tctgcttcca gccagcggat
    13261 acttatcatc ccccggaagg cgatgccggg aagtactccg cttcccccct ccacataata
    13321 ttctccgggt tccacacatc ttacccatgc cagcaaatca gcctcgttgt taaacctgac
    13381 agcatcaccc ggaataaaaa tatgaccaaa accaaatgcg cccggtatcg ccagacaacc
    13441 ttcagtccgg tctcgaatat caccctgtgg ctccattatg gctgaaactt tcagtcccag
    13501 attgtcgcgg gattcctgtt gcgcctcttc gccttctgct gcaatttctg acaggtgatt
    13561 aggagttttc agtgctgttt tcagctccgg agtgatatcc acctgccagc tctggggagg
    13621 gacgctgatt tgcgcggact gagcaatgcc tctgtaggtg attgtaaaat tgcggacgag
    13681 tgactcacct gtcgttttct gtctgacggg agtttttatt acgccgcata acgttccact
    13741 ggcctgatgg atgagacaaa tccagtcata actgaaaaca cagtcatcag gaacaacggc
    13801 gctgcacaca atagtgtcct ggcttaactg gccacaggtc agttcattca cagcgtatgt
    13861 gattctgtct tccggaacgg tattgtcttc gcgcgttggt tcccgctcca tcagggcaaa
    13921 aataatagcg tcagggcgtg caggtaaatt actggcagtg cattcagcaa cccacttttc
    13981 aaatgctttt gttaacagtg cgctcattac ttcttaattc tcgctaatgt tctgcggtaa
    14041 ttctggccat acaatcgcgg catacgatgc tttatctgta acctggctga atgtcatctc
    14101 tcgtaacttt tttgtataaa tacggcaggc tttcagtttt tccctgtctt cgtcgctgat
    14161 taatcccagc agcaggtctt tttcccactc gcaggtcatg atgctggact gttttaacag
    14221 ggcatcacgc tcgtcttctg cttttaattt gtaatcgaag acaaattcat cattgcggta
    14281 aaaccagtaa cccggtgcag tgatgcggcg gttagcggta atatccggaa cttcaataac
    14341 actggcatta cggggttcaa tgcctgtcat atccttaccg acccacacca cgcgcccgtc
    14401 cccggtgtaa accattttta ttgtgtcgct ggcaaagttc ttctgttctt cataccagtt
    14461 tttgtcgtct tccgaaaaaa gccaggtgac accatattgt tttgtcatct gatattgttc
    14521 tgcggttttc ggattgcccg cagtaatatt ttttaaatgc aacattatta aacactcgcc
    14581 acgttatacc aggtgccgtt aatcagtttc tgaagcggtc ggtaatacac gccgccgatg
    14641 ttatctgccg aattacttcc ggtttcctgc acattaatac cagataatcc atggcctgaa
    14701 ggtgagcgaa atgtccagga tatctggtta cctcccgggt tgtaatacat ttcggaacca
    14761 taacgcacat cctgcacgcc gcctgttttg gtctggtaac gggcatcaaa gtttccgtag
    14821 tctgacggtg ttacccgccc ggtaacgttt acaggtttat tactctgaat gctgccactc
    14881 tgaaaacgca acacatgcac gctattggca taaacatcca gcaggccatc accattctgt
    14941 ttcaggccgg tatcgttatc cccgaaagca attgagtttc cgcccagcgc attctgaacg
    15001 ccgataccca acgcaccgtt aactttcgaa ccaccgccaa cagatactgc gtgtaacatg
    15061 gaaacttcac ccgtccgcaa attaatagtg aacggacgca gggggccaat atcgccattc
    15121 tcgccctgac cttcactggt agggataagg tgcaggcact cttccgaacg acgaaaaatc
    15181 aggccaaaag cttcgttgaa aatcctcagt gcattaacac cacggatttt cagttccccg
    15241 gtcatggtgt cgccgtcgcg ctcaacagcg tcttttgctt tatccattgc ggcttttact
    15301 gcctttgatg tggcggcgcg gtcttctgcg tcgctgtcgg tggagttgct gtactgcgca
    15361 aagcctttct cctgcagtgt tgcgtccgga tgatggcggg atttttcgtg ctctgccagt
    15421 gcattgcttt gttcttcgtc gggtgtctcc gggcgcaggt cctgtgggcc gtctcctgtc
    15481 atttttgcaa gtggcgcgac aaagtgtcgg aagccgttac cgtctgtata agacgcatgt
    15541 tcctggcggg cgcagaacgt aaaaacggta ttccattcgc cagtaacaaa tccctgccag
    15601 cttgcatcaa tccagagggt atccccgacc gcagccggca ggctgtaagg ttcgcgcaga
    15661 ctgacgcgca gacctcccac ataacccacg ccggcggcaa cagtagcggt accgtcctga
    15721 tagctgacct gaaaaccatc ccccagaaaa gcggcttcac cgtagtgatc aaacgccagc
    15781 agccggcggg cctcatccat tcctgcaagg cgtgcagtga aatcaatctg ccagacatca
    15841 gcgctgacat cgatatgcat tgctgcggct gcgccgtcaa actccatgga aaatgtgcgg
    15901 atcaggttgt ttccctgcac gccgttcgct gttttaattt tttgctgacg aggtgtgtgt
    15961 gcaatcatgc agagcacgcc gctttcttcg ttcagcagac cgatccagtt gtattcgaag
    16021 tcgccgactg tcgtgtccag aatgatggaa aacgcggtcg cgttcggcga caggtggccg
    16081 tactgggtga ccggcgcacg atactgaatc atggattcat cagggagtat ctcatcgcgg
    16141 gggatctctg cggattcatc ctgtcccgga atatatgcaa aaacaaatgt atccgggcgc
    16201 gcaggttttc cactgatgat ttgatttgcg caccagtgtt cgtactgttc agtaataatc
    16261 gtgctcatgc ttcatctgcc tgtaatgtgt aatgttccac ggacaggccg taatgtcctg
    16321 cctgtagcga agcggttaac cagatggtgt cctttctcac cgttgcttct gctgtgtgat
    16381 acctgtaatg gccatcgaat gtgccggctg tcagccgggc agtggttgta ttgattacct
    16441 gaaagaaata gcgcctgcag gtacgaccat actggcgcac gagctgcatc atcagcgcgt
    16501 tgttttcact taactgggtg tcattaatgc gcagtaaaat aacgtcccag tcatgctgca
    16561 gttgtcgttc cagtgtttta acgtctccca cgccaagacg cttaaagatg cgttcgaagc
    16621 cggcgcgttc gccagagtcc tgagcgttaa taaacgcgtg tttcactctt aagcgaaata
    16681 acgaaaccgg ctcaccttta aatcgggtga tattgcgctg ataagccagc aggttaagta
    16741 aaggctctgc gcaggtgtcg acatcaatct gctgtagtgg ccacgtcagc cagctgtata
    16801 ccttttccca gtagcgatgc gatgaatgtg ccagcgttaa cggctcgcct ttattcatcc
    16861 aggtggggag tgggaattca gggatctccg gaagtttcac gcgctcacct ccacagtaag
    16921 ggattccaga cgaggaacag ccagatcact gagaatatcc ggaagagaaa atgtaaccga
    16981 ctccacctgt ggaaatacct ggtggatctc ttcgcccagt ctggacatgc tgaaacggct
    17041 atacggccat gttttctgaa cgtcataatc gctgttttct cgaaatgcac agcgaaccag
    17101 attttccaca ttgcgcaata acgtctgaat ttccccatcg ctgaggttca gcgttgcata
    17161 taaccagagt gtcacggtca gggtgtggcg tgtttcaggc atggaaaaac agcgcagatc
    17221 atcaccgtgt ccgtgatgac cttcatcgtt aatgaatgcg tttactgcat caacgaacgg
    17281 ttcggatgcg atgccggtat ccagcagaat gtaagcattt gctgtgccgg ggccgcgtgg
    17341 tgcgtcatgc agaaaataga tgcggtcggc actgatgccg gcaacgccgg caattaatcc
    17401 ccggtaaact gcatcggtgt gataagcgcc ggcaagatta aactgattgc gaacacgatc
    17461 acgcagctcg tcatcgcttt cttcgttggc tcccggtgtg gtcagccagt tttcatcgtt
    17521 ctcaacaccg gcaataccat caatcgccac cggaaggatg cggtaatatc ccggcgcaag
    17581 gttaaagccg gctccggcct gttccgcaga aacatcgatg ttcatgctga gtgtttctgc
    17641 cggaataacg gtatccctga caacggtcag cgtataaatc acgccgttaa tgcgttctgt
    17701 ctgaatctgc gtaccggccg gcacggtaac tgcgtgatca atgtcgtttt tggtgaaacg
    17761 aatcacgccg gctgcgtgcg tggcagcctt gcgttgcagg tttaccgccc aggcaaaaac
    17821 atcaacgaat acaccgctgg catcagccag aaacaggttt ttcatcacca cattaaccag
    17881 cgcatctttc agccacatca cgggttttgt ggtgatagct gtaatcagtc gccagaacgg
    17941 cgacatgcgg gatgtgttgg tgataagccc ttcgtctttg acaatggctt caaattcagc
    18001 acgtgcctgt tcttcggtta ccggcatgcc attatcagcc agaatgcgct cgtaatctgc
    18061 ggtaggtttg ccgttaatca tcaagagata ccgtaaaagt caggggttca aaaaaatctt
    18121 cggtgtgggc gctaatcagc aggcgaccag aaagcggggt ttcttctgtc acactgaccg
    18181 tgccaggtgt gatgcgctca tcatcttcaa tcagcagtgt catctgcatc atgatgtcgg
    18241 cacgaagcgt cgggcttttt tcagccagca ggcgcgttgc cagtccgctc tcaatgatgg
    18301 cgtgctggca gtcctgggca atactttccc tgttgttgca taacactggt tcactggcgc
    18361 tgttcagcgt gagattgcgg ccggtgatga gcaaatcaat gtaaagcggt ttatcagtat
    18421 gcatgcagct ccatccactc gttaagacgg gcaggggatg gatcctgcac attgacgttg
    18481 actacacgac gggagttgtc gattgtggtc tggttttcgc tgttgttctg catttctgcc
    18541 gcaatgccac ccggccccgc gctgatggct ttaccgccgg ttaatacgga gccttcgcca
    18601 cttcctgtgc tttctgatgt gccgatgtta acgccgggga tcatgttgag tttgtccaca
    18661 atccagcccc atgaatcact gaaggactgt ttcaccagtt cccagagatt actgaaaatc
    18721 ttcagtatgc cgccggcgag atccttcagg gcatccagtg gtgaatgggt ggaaaaatag
    18781 ttaaccagtg cattccagcc atccctgatt gcactccatg cattgccgaa ccacgccccc
    18841 atgctgttaa tgatgccggc aacccactga aatgcagcgg tatccatcag tgcagctttg
    18901 atttcatccc agcgggtgat caggaaataa atgcccacgc ccagcgcagc cagtgccagg
    18961 atgattaatg tgatggggct gaaaagtaac tgtgttgcaa ttgcggctcc gctggtgact
    19021 gcggtgtaga ttttcattgc tatgccggcg gcacccagcg caacagaata aagccagagt
    19081 ccggcgcgct gtaatttcag cagcgccagc tgaatttttg ctttgacgtt gtatgttccc
    19141 atagcaatgg acatggccag atacagcgcc ctgaccgttc gggcaactac agtgaacgcc
    19201 cacatggtag ccgtcagtgt gcgtttcagc agaatgagaa tcttcagcgg cgcaacggct
    19261 gccagccaga ccagccgcag tcctgtccag acaaacttcg ccacacccac cataatgttg
    19321 acaacagcac ccactgcggc aatgcccagc agggcggcag acagtaaacc aatggcccgt
    19381 gtaatattgg gatacagacg taaccaggca acaaaggatt taccgccttc gttgcttttc
    19441 tggataaacg ggtacagaac aggcagcaac tgcgtgccga tttcgatgcg aatgccgtta
    19501 ataattgcgg cggcctgttc ccatggatca gccatggcct gcgccatttc gacagcctta
    19561 tccatacctt tgatattgcc cagcgtggcg atattctttt caagtccgcc aatgtccgca
    19621 ttgagtaatt taatcatggc cacagcttca tcggagccaa aggcgctttt cagcaaatcg
    19681 gaatcagcca cttttgacag atcaccaaat ttgcccctga taagtttcat gatctcgaca
    19741 acacttttca tcgtgccgtc tttattcacg aaattaagcc ccagcttttt ctgggcgctg
    19801 cctactgcgg caagaaatgc cttgtacttt gtcccggcct cgctgccact catggtggcc
    19861 tgcagttgtc ccagcacggc gaactgttca gccgcatcaa taccggccgc ttttgcactg
    19921 gcacccagcg tggtgaacgc cgctgacatg ttatcgccgg ttgttttaaa catttgcacg
    19981 gcggtggcgg tttgcccggc gacctgctcc acccatttgc tttttcccat ggcatcagcc
    20041 tggtctttaa agatgccgta catggtgccc atgtaggcgg taatggtctg gctgctggat
    20101 ttggttgctg ctgccaccgt tgctgatgcg gtggtgaagc gggacagctc atcgtcagtt
    20161 aacccggcaa tggctgactg gatgtcgtaa gaagcacgca caaaatcctg cgcagccccg
    20221 ccgtattcca tagtgaaatc aacggcggcg cggctgagtt tacgcaatcc ggactctgcg
    20281 acgcccagtg atttcacctc accgagcgcc ctgtccattt caatggctgg catcagtgcc
    20341 ccctgaatgg ctgcccccac tccccagagc gcagcgcctc cggtagcaat gtcccgaaag
    20401 gctccccgac ttgttgcagc aaatccctga acctgtcgcc cggctgcacg caacggcctt
    20461 gtcaggcgat ctgtcagttc aagaagtaat tcaaggcgct gttgtgacat tacgatccct
    20521 taaaagcacg gataatgccg ttattgacgg cgatgctcat attttcccag tagtggttat
    20581 ccagccagac ggcggcagcc agtgactgcg gcgagtcatc ctcgccgggc agccagtggc
    20641 ggcgcagaat cagcatccgg gtcaggtcat tgcgatcaat ggcccccaga tggcttttta
    20701 tttttttacg gtgatttcca cttccggcac aaactcgtta ttcacggctg ttgccaggct
    20761 ggccggcatt cctggttttt ccagcaactg gttcagcaga tcgcggtgct ctttaatcac
    20821 gatacggcgc aggtagtttt tcagcggcgc gattttgtta tccggcatga agtcgttctg
    20881 caggtcgttg taggctttta cggtcgggat aaacgtcagt tcatgctcgc cgacctgtaa
    20941 agtgatggtg ttctctgcgg tagtctgtgt gtttttatcg ttcatcatca tttcctttta
    21001 aagtcaagaa taagagggct taataagcct gcaggaaggc ttattaagcg taaaatcagc
    21061 gcacgccgtc gtgctcaagg ctgaaatgat tgccatccgg tcggttttta aaacgaccgc
    21121 cccatgcgcc accaagggat tcccagtact cgcccagctc acggtaggcc tctgtgcggg
    21181 tctgatattc accgttaata aacagattaa aatccacggc cagccgctgg cagtgcaggc
    21241 tgttggcaat gccggatccc ttttgtgcgt tgagttttgc ctgttctggc gtgcggtacg
    21301 cctcaccgaa cgtcaggcca taaccgcgct gatgggcaaa ctggatgagt tttccgatca
    21361 tgacggtaaa ttgttgttgc ttatcggaga gtttcatttt tactccttat gaggttgctg
    21421 aggtttgcgc agccagtacc acagtgcccg gataattttc caggcaatgg cggcagcttt
    21481 ttgttccctg cgggacagca ttgctgttac tcctctttgt tctctttctc gcccagcttc
    21541 cggcgcatat gacgcaggaa gatttcaaca atctggtaac cggcaacgcc cattgcggtg
    21601 cctgcgccgg caatggccag tgggtcaagg ttcgggtagc gaaccagcag ggcagcggca
    21661 gaaacaccca gcgcgctccc cagcagggtt cggcccacaa acaaccgcaa cgtaatcggc
    21721 tctgcgccag ccagcacccg acttgcggca gcgattccgc ccagaatacc cagagtgata
    21781 atggtgcgct catgctcctg catggttcac cccatcagtc cgcgcacgtc gttctctgag
    21841 agaacgggca cgccgttgat acgcacaaag tcagggcttg ccaccacgta cttgattttg
    21901 tgcgtggtca gatctgcgct ctcggtgtca atgcttaaca ggccggaaag catcagctca
    21961 caaccgaagg cttcaacgcg gatttcttcg gttcccgtgt tggcgtaaaa cacaaaatcc
    22021 attggcggca ggtcacgcca cgatcccgcc tgagcagcca cttccccgag ctggttaaag
    22081 ctgcgggtac tcatttcgat ttcaccttcg gcactgacag ggccgcgcag tttgccgtca
    22141 gggatgccac gggttttggc aacggcgctt tcatcgctga tgtccagtga gatgcttttc
    22201 acatggatat ccgttccacc gataaaagtg tcaaacgcca tgccgttaat gcgggtcgtc
    22261 atgcgttttc ctccagagat ttatccagct gaatgcccac tttgatggtt ttagggcagg
    22321 cgtaagggcg gacgacaatg ctgatgctga ccgtcttttc gtcctgccag gtgataacca
    22381 cgtcgccttt ccggggcgat ttcacttcgc ccggaaacgt gatgccgtta atttgcatgg
    22441 atttcgccat ggcacgcagt gggcgggcaa acagcgtttc atgtgcggca atgctgcccg
    22501 gcgtgctgtt cagcgagcgg tcggcaatct tggggatggc catcagccgc acgcggcgcg
    22561 ccaccttatc agcaatgcgg acatgctcaa tgacgttgta gtccccgcct tccacctcaa
    22621 gtgttacacc gtcagcccag taaaggccgt catagtcggc ataccacatg ggcacgctgt
    22681 agcgggcggt tgccagcgcc tgcagagtgt cgagatcaat tgcctgccct gtgctgtctt
    22741 tcgggcgttc tgtggttttc agtgcggaca ggggcccggt tgccacacgt gccggactgt
    22801 cagcaatggt gacggcgctg ttacacaggc gaccggcaag aacgcccggt tcaaatccaa
    22861 aaatctccgg aaccagcatg acctgcgggg ctgcaatgcc tttctgtagt gcggtcagtt
    22921 cggcaacgta ttccgcccag gttttactgt tgtcgttggc ggcgatggtc aggatgaacc
    22981 agatgcggcg ctgatattta ttgatgatgg tctgacgtaa cgcctgtatg gcgttgatgt
    23041 catccttcgt gctgaccggc tcggtgatca ccacgccttc aactgaaaca gtttcctgag
    23101 ccgccagtat ggcgttctgc catacctggc aggctggcgt tgcttctttg cctttgccgg
    23161 cttccggcag aacggcaaca tagaaaaagg cattctgtcc ggcattggtc agtgcagact
    23221 gaaggaagtt cttcagcggg ctggcgttct ttcccagtag ctcatccaga tcgctgttgg
    23281 cattaaccgg cagaacctca cctttgttgt tttgtgcatt gcccacaaac agcagcgtat
    23341 tttccacgcc gtccggtgaa ctgctgaatg tgttgtactg ttcaatcgtg acagatggcc
    23401 atgtcatggt ttgtctcctg atttttgtta tctcgtgccg ccgtaatgca ggctgcgcag
    23461 ctgcgcttcc agaatgcggg caaattcagc atcgctggct cccagaaatg cgcgggaggg
    23521 gattttgatt tcccatacac gttttttctg ctcgcctttc agaatgctga tcaccagtcc
    23581 ggcctgcgcc atactcatgt tttccataat ccatttcagg gaaggttttc tgcgccccct
    23641 gcgcccggtc tttttgctga ctgcgccgac gggggcgcga aagcccagag aaagaaggcg
    23701 ttctgcctgc cgtcgtgtgg cgggacgggt gcgcatggct tcgctgtccc ggcgctttgt
    23761 ggcgcggcct ttgatggttg cgccgtgctg ttgcacccac gcgaccgccc caccatgaga
    23821 gccggtgttg taagcccctt ttttgaagaa aaggcggaca cttttcccgc tgccgtcaac
    23881 cctgatggcc agcagtttcg gcagtcccag cagcattttg tttttatacc tgccgctggc
    23941 tttatccggt ctttttcgtg gtgcccaggc tgccccctcc ggtgttcgct gtgctttcac
    24001 attgcgtcgt gcagccggta tcaggccgta tttcgcaatg cgaaccagca gctttctggc
    24061 ctttgcaggc ggaagttctg cctctctgat ggcgcgacga acctgccgga gttgtgactc
    24121 gttaatcact gggcgcgtca tggcatcacc tgacagtgaa gctgatgcgc ctgagccacc
    24181 cagatttcag gcttttccag ctggtaacgt ttcccgcctc tggggatggg gccgttttcg
    24241 tcctcaacca gggtgatggg atcaaccagc ggcagactga tttccagcca tgccacttca
    24301 ttttcatcat ccacttcgac gtcaacggct ggcgcatccg gtgccaggcg ctggcgcagg
    24361 tcgccgccgt tgtctgccag ccaggcttca accagagaaa acaccaaatc cggattgagc
    24421 tgacgatagg gccatgcgtc ccatcgcaga aaagccgtat attttcggac ctgcgtacat
    24481 aactgcccgt gccccagcga cttcgtaaac ggaacgagcg tgatgtcgtc catgtcactg
    24541 gtgaacggaa tgcgtgcgcg tgccggcaga ttgttttcaa tgaatgccgt caggctggcg
    24601 agttgcgtca taccatttcc ttaatcaatc agcgcgatgg atgcacgcgg tcggcccagc
    24661 agcgcccgca ccgccatggc cgcttcagcc agcaacgtcc ggcggctctc gctggcttct
    24721 gatgagggct gcgcctcgcg tcgccccacg ctggcagatt ccggcaaaag atcggccttt
    24781 gcgcgggcat acacagcctt ggtgtacagt gctgtaatgt ggttctgcat ccgttcaggt
    24841 tgtgcatccg tattgcgcgg ctctggttgc aacacggtgt aacccggaat atcggcggcc
    24901 cggatgtggc cctgttcctg ccagtattca cggcgtgcag ccagttcagt gttaatctct
    24961 gttaccgcgc aaagcagtgc cgtcagcacc gtttcgtgtg acgtgacggc ggggatgctg
    25021 cggctctttt caaaatcgcc ggcatcaata tccggccaga atccatcgtt ctgaataatg
    25081 gcctgctgat agtgaatgct tttcccgtca aacatgctca ctccggggaa aggcgggctg
    25141 accggtttcc gcagtgtgct gatggctttt gccggcacac ctccaccgcg cccgcccggt
    25201 tgttgggagt cgtttacgtg ccctgcaacg cgcgcagtct tgcggcaatg cgctggcgca
    25261 gggttttcac ctgaattttt ggatgcagcc aggcagcccg ttccagacac tggtcggcct
    25321 gttgcagtct ctccggatcg ttaattgcac tggccagcgg tttaccgtca tcgccgcgca
    25381 gcagcaggac gcctgcaaag cgccagtagc tggcagcaag gcgttcattc acgcgccatt
    25441 tgtcacggat tttttcaaac acctgctgaa aatatggcgc gatactgttc ccacgttcag
    25501 cttcggtttc tgcccattca agaatgaaat gggccacaaa cgttggcagc tcgcttttga
    25561 agttctccgg cgtcttttgt ccctgctcaa tggcaatgtc agcccaccgc agcgccatct
    25621 caaactgccc ggtatcgaac agccagatga tgcagtacac cagaatggga ttctgataga
    25681 cgcgttcccc ctccagataa gcctgtgcgt gtggcagcca gcggggcagc agcgtgttcc
    25741 gtttgaattc cagcttgtca gacagcagct ccatgttgtg cagttgtctg acatcgttat
    25801 ccagtgccag cagcttaatg tgctgactct ctgtgctgat ggcgcgtccg tccgttgtgg
    25861 tcatgagcgc cgcacggcgc tcatccatct gtcgggcacg ttgtcgctgc attggcgttg
    25921 gcataccgtg cgctccgttt atcaggcgat ggtgaccgca gactcatcca cggcagcata
    25981 taaatccgga tcgcccaggg cgtacccctc gtaacgccag tatgagtttt cgaactgttt
    26041 gcgatcgccc acatcttccg ctttacgacg gcgggaaccc ttcagcgtca ggatctgcag
    26101 gtttggcagc atggtcacca ccatacgctt acccggcata aacggcggaa tgatggcctt
    26161 gcggcctgcg atgttcttcg tcagcaactg tgcggccact ttttcggtgg gcttgtcctc
    26221 tttgttgtag aggcgtagtt cttcagcagc cacaaggtct gcgccaacca gcacagtaag
    26281 gcgaggatcg ttgtgatatt gcgccgggat ataagtgcgg atcaggtctg aggccatggc
    26341 atcaaggccg acataatcac cgccttcgcc cagggtaacg gcgtccgtca gaatacggga
    26401 ggtattgccg ggctgttctc cccacttttt ggcgatttca tgccagccga tgttgacgtc
    26461 ttcgccgttc gggtgacttt ccgggtcaga gttttcagca gcctctttgc cgttaaagcc
    26521 aatgcgcagc atgtccagcg caaagttggt gacggcggcg gagttcatca ggttgaaaaa
    26581 ttcctgcggg ctgccggcat tcgcccagat ggcgagttgt tcccaggtga tcacgcagca
    26641 ggaatcagtt tcaacgagtt taaattcgtt gcctttgatg cccgaacctt tagcgaaacg
    26701 accgcttttc acgcgaccgg tgcgcagcgt ggattctccc actgtgacga cctgcccctg
    26761 cgggtgcgga acgtccatgc aggtggtgaa actcagaaat tccgtgcttt ccagcagggc
    26821 tttacgcaga gcaatactgc gtggctcggt cagcgaaaag aaacgatcgc ttgattttcc
    26881 gcagtcactg aatgtttttt gcagttcgct gatgtactga ttaaccagct tttgtgcttc
    26941 tggtgtcatg ttcattgtgt tctctccggt tacaccaggt taaaagtttc gccaccggcc
    27001 ggattgttac ccggcagctt cgtggcatcc ttgctgagtt cagcaaatgc ggtttccata
    27061 ctggtgactt tctccgcgat ggcgttcacc gtggagaaca gcttttcccc ctgctcagtg
    27121 gtcagcgtga aggttttgtc gtccttgttg ttctgttctg cgttgttctg cccctgatcg
    27181 ccggtgctgc cttccggctt gttatcacca gtatctttcg gggcatcctt cgcgctgaac
    27241 tgcgcgacgt tttcttccag cttgtccagg cgttcgctgg ttttattaat agcgcccatt
    27301 aactggctga actgttcttc gttcatggct tggtagattc cctgttggtg gttgtcagat
    27361 gagaagaagc gggagaagaa gttgcgcttg gccagctcat catcagactg cagcgtaaaa
    27421 ttcagcgcct ctgcgttgcc catatggatg gtttccccca tggaaaactg caggcgtgtg
    27481 gtgttaacgc tggccggggt atccgtcacg gcgatacctg acacaaagaa tttgcccgtg
    27541 cccagatagt tttcccgcac ctcaatggag gtaaaaagct tctgcccggc cttattggct
    27601 tcaatcagga agcgatttgg gatcaggcgt gctttaagct gcaccttgtc accaaatttt
    27661 tcgactttca gggcatcaac aaggccgtag ttattggtga aggcacgcca tccggaatcg
    27721 gcgtgatatg gccagagcat ggcggctcgc tcgtccgggt tgtaaacctc ggcggcatct
    27781 gtcagccact tcggatcaat ttcccgaccg tcgatggtgg ggcctgatgt ggcaaccaca
    27841 acccagtctg ttttctgctt cgtcatctga attaatccgc tgataaaaat taaactggcg
    27901 ttatttaacg gagaaataaa aatgtcgtca tctgattaat ttccggtact ttcggatatg
    27961 tgcatatatc cgaaaaatat cgaaaacaga taatcgttaa aaaaatgcct gcagcaaata
    28021 atgggatatt acggaacgtt acggaacgaa ccgggaaaag atgaaaactg gttaaaacaa
    28081 atatcacagg tattttatgg cgtattctga cgaggtgatt gctgctgcaa aatcgctcta
    28141 tctgaaaagg cacacaccaa aagaaataca aaagaagctc ggactgaaca gcccgcgaat
    28201 tgtttattac tgggcgacaa agtttgagtg gtacatgcag ctcaatacgg aaggcgtgga
    28261 agatgttatc gcccggcgtc tcgctgtact ggcggaacgt gaccataaga cccaggaaga
    28321 acacgatgag ctcgatcgcc tgattggtca tcacgtcaaa ctgatgtcgg tcagaaacaa
    28381 gcacacggaa cgaatggctg agattgcgcg aatgggagtg gacattcccc aacctggccg
    28441 ttatggaaaa gaagaacgcg gagaaaaagg tgcaggcaag aaagagcgtc cccgcaaagc
    28501 taatgacgtt tccggactga ctgctgaaag ttttgagccg tttacgaaaa agttgtttgc
    28561 ttatcagttg catctgcgtg aaaacaaatt ccgccgtgta cgcaacctgc ttaaatcccg
    28621 ccagattggg gcgacgtatt acttcgcgtt tgaggcattt gaagatgcag tattaaccgg
    28681 cgacacacag atatttttat cggcatcaaa acgtcaggcc gaagtgttcc gtacttatat
    28741 tgtaaaaatt gcacaaacag agtttggcat tcccattaaa ggcaatccgg ttaagttaag
    28801 taatctggct gaactgtatt ttctggcgac caacagtaac acagcgcagt caaacagcgg
    28861 ccacctgtat attgatgaat acctgtggat ccccggtttt cgccgtctca atgaagtggc
    28921 atcagggatg gccacccata aacactggcg cattacctat ttctccacgc cgtcatccaa
    28981 aacacaccag ggttacccgt tctggtctgg cgatgaatgg cgcaaaggcg atccgaaacg
    29041 aaaaggggtt gagtttccgt cctttgatga gctgcgcgat ggtgggcgtg aatgtccgga
    29101 tggtcagtgg cgctatgtgg ttacgctgga agatgccatt gctggcggct ttaaccttgc
    29161 tgacatcaac gagctgcgcg agcgatacaa cgaaacagcg ttcaatatgc tgtttatgtg
    29221 tgtgtttgtg gatgacaaag agagcgtctt taaattcgat gatcttgtgc gttgtggtgt
    29281 tgatgtcagt acgtgggagg attttcaccc ggaagagccc atgccatttg gtaaccgtga
    29341 agtgtggggc ggctttgacc ctgcgcgctc cggcgataac gccacatttg ttgtgctggc
    29401 accgccgctg gttgcggcag aacgattccg cgtgctggaa aaacaccact ggcgcagcat
    29461 gtcattccag tttatggcag agcgtatccg cagcattaag gcgcgctata acatgacatt
    29521 tatcggcatt gacgtcaccg gtcttggcta cggtgtcttt gagctggttc aggggtttgc
    29581 ccgccgtgaa acagtggcca ttcattacag cgtggaatcc aaaaaccgcc tggtgatgaa
    29641 gatgctggat ctgatttacg ccaaccgtat tgagtgggat gaagaagcca cggatattcc
    29701 ggcatcgttc ctggccattc gtcaggaatc caccaacagc ggcaataaag tcactttcac
    29761 cgccgaacgt agcgaagaaa ccgggcacgc tgacatcttc tttgccatag ctcatgccgc
    29821 aagtaatgaa cccctgaact ataagcacaa gcgcaaatca acatggatcc tgtcagatga
    29881 gtaaaaagaa aaaatacccc gtgttacacg atggcgtggc aaaaaaaaca gccagcaaaa
    29941 tgacttttat tgaatttggt gacccggaac cggtcgctgc atggggctgt tattacggct
    30001 cgctctggga tggctataat ggctggtaca cgccgcccat tgagcgcatg gatctcgcca
    30061 tgttgtccaa tatcgcaccg tatcacggcg cggtattgcg tgcgcgcgtc aatatgatca
    30121 tgcagggttt tcggggtggt ggtggtatga cacacgccgc catggcggca gcagtaacca
    30181 atctgctgat attcggggat atggggttgc ttaaagtgcg gaatggcttc ggtcgagtgg
    30241 tgcgcctgca tacgttacct tctctgtacc tgcggcgtaa caacgagggt ggcacggtga
    30301 ttgtgcaggc ggcactggaa gatctcgttt acccgccagg cgaagtggtg ttcgtggcca
    30361 tttatgatcc gcaacagcag gtttacggtg tcccggatta tattcacggg atggaatccg
    30421 ccatgctgaa tgtggatgcc acccgctttc gccgcaagta ttacaagaac ggcgcacatc
    30481 ttggttatat cctgtattcc actgacccgg acatggatcc cgagctcgag gcggaattcc
    30541 gtaaaaagat agaggcgtca aaaggggcgg gcaattttaa atccatgttt atcaatatac
    30601 cgggcggaga caaagaaggc gttaaggtga tccctatcgg ggattcaggt acaaaagatg
    30661 agttcctgaa tataaaaacc atcagtgccc aggatcagct cgttgcgcac cgtttcccac
    30721 ccggacttgc cggcatcatt cccgcaaata cggccgggct tggtgaccca ctgaaatccc
    30781 gcgaggcata ttacagggat gaggttatcc cgatgcgccg cctgattatg gaggggatca
    30841 acagcgaccc ggatatcaga cgactggggg aggtgaaatt tattcttgat tttgatgaac
    30901 ccatggagtg atgtgcggta tggggaaaga gcgggtaaaa tcggtggcag taaaacgctg
    30961 ttccgggagg tggaaaatgc gcagacagaa agcgcgatgt cattgctgcg gtgcacatgc
    31021 agtgattgag aaaacagcct ggaaaaccga tcagtttgct gatgtgtatt accgttgcac
    31081 ccgtcttgag tgcgggcata cctgggtgat gaatctgacc tactcgcaca cactggtgcc
    31141 cagcgggctg gagaatggtg tgttaaagct gttgattgag cggatgcgtc cggaagaaaa
    31201 acaaatggct ctggagttgt tgcaggccgg atagctgacg cgcttcgctt gtccaacccg
    31261 gaacgggcgc acaaagaatt tgcgcacccg ttccgggttt tcttattcaa tggcagacaa
    31321 ctgataattt gtgtcttcct gcaggctggt taaagaaata ttatccagtg cagccagaat
    31381 aacgtgctgt gtatataatc cggaacattt cattgcccgg acaatatcac caacactgta
    31441 attttctttt gttgggatat atccaccacc cgggccgcgt gtggctttta ccaggctact
    31501 ttcccgtaaa tatctgaata tttgctccag atatgacagt gaaacggttt ctttgcttaa
    31561 ttgccggagc gagattggct ttccggtgta ctgtttcaca aatttaatca tcaccataac
    31621 tgcaactgat gcacgctggc ttccggaatt atctttcatc atgattactt ccattaatgg
    31681 cataaattga tggagcgggt cagtgaataa agaggcaata cattccatcc cttagagcgc
    31741 cagctgtctg caacatcttt acttcttgtt atcgccggta ttccaatagg attatttgcg
    31801 tgtatccatg ccactggctc tgcttccagt gatgcaagtg cgatttccag tgcggttaac
    31861 atattgtgat cgtcttcatc aagaccgaac gggatgtctt cgcgccacga tttaaactct
    31921 gtgattttac gttgtaacca ttctttggta atggtggaca tagttactcc tgttttcact
    31981 tcgggaaaaa cgcctgaata ttctttttca cctgctgcat atggggggcg ctgtctgctg
    32041 ctggttgcgc cggtttttca ggctgtactg gtagcggtgg catccgtatt tcgtcttctg
    32101 accattctgc cagcgaatac gccaacgcgg gggtgcgttt tataagagcc agtccggcca
    32161 gaaaagccgc gcgttgtgcg cggctgcgtt cggaggctgg caggctgtcg aggtaactgc
    32221 acgcctcccg ttcgctcttg acgacggtgg gcttcagata gaaacttatc cgtctggttg
    32281 gtgtcgtcat tgatttactc ctggtccatt gcgtacagcc cattaaccag agcaaactgt
    32341 ggcaccccgt ccgcgatgaa agtcgcatta actccgcagg cttcgcagat agcgggtgcc
    32401 acaatctccg ctcctccacc tacaaccatc acccgcccgt aacccgaaaa acccgccagc
    32461 gcgcggatca cgcgttgttt cagtgtttct tccttttcac gaataactgc catcaggctg
    32521 gcgtaatgcg cgtcattgtg gatgtgctgg cgcagccagg cttcatcgtg gcgatgttcg
    32581 ataatggtat tggcgatgtg gtgactggtg cgcataccgt tggtggccat caccgacagc
    32641 acggcatcgg ccatcagaga aacgcctacg tgtggatcgc aaaacacctg gctgatacct
    32701 gccagctgcc cctgaacctt tgccacatcc agcgtggttc cgcccaaatc cacaatcagc
    32761 agggattcaa acggactcat gtcggccagt gctttaaagc cagccggaat ggattcaggc
    32821 ataacccgca cgttacggat agtgaatgct tcgccgttct ggtactccac cgggcgcata
    32881 acgttcgctt ttttgcggtt gatgttggcc atgtccggct gtgcgtttgt gtcgaaatac
    32941 tcgctcagtg gcagggtgac aaccacatcc acctcctgtg gcgtgatgcc tgatttgacc
    33001 agcgcgtgat gaatggcaat gacattcaca tcgctgtact ggtattgcgt gtcggtcgtc
    33061 tggacaaagc gatcgctgac cggatcaaaa ccatagcgca caccatcaag catgtagttc
    33121 gcgggctgcg tgccaccgaa cggcgcagac cattccgact tgaagctgtt cgggctgatg
    33181 gcgttgcggc gttcgccgtt ctcagtccat gccagcttga tgttggtgga gccgtcgtcg
    33241 atacaaattt tcatgtcgct tttccttatg ttgattaatt aatcgtttac gggattttta
    33301 aatcccgttt ttgcctgttt tatgcgcgct tcatatatcg cggcgcgttt tttgctcatt
    33361 tacgggattt gtgaatcccg tttctgtctg ttttttgttt ccacttgtca ggccaccccg
    33421 cagcaggtct gctttgcggc gggcgcgttc agtggtttca ctgattctct gtgcatgctc
    33481 tgcgtcgcgg atggcgcgca gcatgtcaga aagcacggta acgggggttt tcatggtgtt
    33541 ctggtcctgc tgaagtgtgg atgccagacg tgcggcggct tcggggtctg atgcccccag
    33601 ctgttccaga tagctggcgg ccgggttatg gcggatctcc gtgctgctta cgccgtgatt
    33661 acggctcagg cgctgccaga gctgcgtgat tcggctgtcc gggcgggtat ccggtttgcg
    33721 tacaatttca aatccctgcg gtgcaatgat gctgccgtca acgtacagac tgccgccccg
    33781 taacaggtgc tgcatctgct gttcaccaat atgcaggccg agagattcag cagactcccg
    33841 ccattcttta gcgagtaatt cgtggttatc aggcaaaggc cgctgctgtt tgcggctctg
    33901 tgtccagctt tgcatttcat cactgctgtt ttttgcctgt ttgtcacgaa gcgaacgcat
    33961 cagcgcccgg cgttcgtgcc gtttcagtga gcgcatccat tcattcactt caacgccgtc
    34021 aggaatctgc ggccacggtg ctggccgttc ttccggctgt tctgtcccgt tgttgcctgt
    34081 ttcctgtaca cggggacagt tattgccacg agtccaaggg gcggcagggc cgccctgaag
    34141 gtcaaaacca ttttcgcggg tgctgtcttc cgcttccggt ttacgtctta ccagcatcca
    34201 gttatccgga tgcgtgcaca cacgggagga ttccccgatg agtggtgacc agatcccgta
    34261 aatctgtacg ctctgttcgc cgtaatcgtt cagctcatct gcgaggtcgt aggctgtgcg
    34321 aatcaggtag tctttgcgtg gaacaagtac gccgccctgt ttctctatgt aggtggcaaa
    34381 acatccggca tcagcggcag cgagtaccgc atccattgcg tcatccttca gccgttgcgg
    34441 gccttccggg ttgcgtgcca tctggctggc aaggcggcgg agttcacgcc acacctgacg
    34501 ggaggggata ccaaagaact ggaactggcg gacacggtga aggcgcgccc agccgatggc
    34561 gcgttccacg ctctcggcca ttgattttcc ggtttcgtgg tcaacgcgtg gcttgcccgt
    34621 tttcgggtcg atgccatcta cggcgcggct gtccaggttc tttccgatgt aggtggcgat
    34681 gtagctggtt ggcgtgcctt ttgagccgtc gacgtactcc gccttaaagc gtggggtaat
    34741 atcatcaccc agctcgtgac gatcttcctg aatggcaata tcgcgggtgt gagacacaat
    34801 ggtgtcgatt tcttccggat gagcaaagac catcatatgc cagtgcacgg tgccgtcatg
    34861 gtgaggctcc accgtgcgga taccatacca gcgcaggccg tcgcggttca gtttcttgcg
    34921 gaccgccgca aaaaacgtgt taaccaggta atcgctggag tcgcgcatgg tggccccatt
    34981 ccatttggga ttcggatgac cgttctctgt tgtggcgtgg tattttgacg ggcaggtgat
    35041 ggtcagaaac accgctctgt cgccacgggc ttcggccaga agttccagcc ccttcatggt
    35101 ggccatcatt tctgccttac ggtgaaccgg gttacttact cccgcgtaat acactgtctc
    35161 gagatcaatc gtgaacccgt cttcgttttc cagcatgaaa cttttcagga aatcgcgtgt
    35221 tttctcgcgc tgtgcgcgaa actcgcttaa cgcgtcctgg ctcagatagg gcgatgtttt
    35281 tctggaaacc agacaggcgg cgcggagttg ttcttctctc cactcgcaac gtaacagcca
    35341 cagtttgcgt ttccaccatt ccgcacaggt caggcgaagg attgcgcccg gcagcagttc
    35401 tgtgtccggt tcgttcctcc ggtctttgtc tgttgtcagt gcgtcataat gcggaggcat
    35461 ggcgtgcaag tgtaacgcca tgcgggccag catctgatac gccttcagcg ttacatccat
    35521 ggtcagctcg ccatcagtcg cgccaaaacc atcgcagagt ttttcgaagg tgctgctgaa
    35581 catcgccgcc gtcatggtgg ccagcgtctg tatctggtgt ttgttgagtt gcggcaggta
    35641 aagcaaatcg tccaggcgtt cacgtccggc aagggaccga taacccggtg tcagccaacg
    35701 gctgtcggtg cggtccagac gtacgaatat tttgcgcagg gttccgcgcg cgtagcgttc
    35761 agcctgccag ctctttttgc ctttccggcg atcggcttcc tgttttttgc gcaggaagga
    35821 gaggtggcga ataagcggat cgcgcagata ggacggcagc aggcgcagcg aggtcatggc
    35881 ttcatccact gcgccgcgtg cctgttttct ggcgtctcct gccagtgtga tggttttgtc
    35941 ctgtttttcc tgtgcgtcca ggcttttatt aatcaggttg cccagcggcg tggcggagaa
    36001 cgccgcatca gccatttcct ggcggcgctc gttctctacc cggtaggcat ccagccagga
    36061 ggaaagcgcg gattcaggag cggggatccc cgttccttca cgccccactg cgtggcgcgg
    36121 ttgttgccag tccctgatgt actctgccgt catagtgatt tacttcgtca tgccattcag
    36181 ggtgtcgcgg cagactgtag ccagccgctg aatttccagc acggtgtctt ctgtgtcggc
    36241 atggcgatgt gtgatgcgga tgctgtcggc aatcacatcg acgattgcag aggatgggcg
    36301 ctggtaaatg ccaataacgg acggggtgcc accttcaatg cgggaaagcc tgtaatttcc
    36361 ctcgtggctg tcaatcatgt agcgaccatc aataacaatc tttccgtcag cgagctgcgg
    36421 tacaggcagg gatttcaggt acatgtcata acgatcacgc acgcgagcgg caagatcacg
    36481 ctctgtgttg agcaggtatt caagaaagtc gttggcgaga atcattgcgg caatcctctt
    36541 gttacagatg tgcgaaggcc tcccgccgca aggtgcagga aaggcccgga acaggaatta
    36601 atggagtttg ttttgctgct ggatgagctg ctgaagctcg cgcagatcat ccgccagata
    36661 actgaaaaca gcggatgagt agaggtttga aagttcgcag ctacgctcat gcagcatatt
    36721 gatgtgcatg attttagcga cgcggaatgc gcgggaaagt ctgcggttga tttcagtctg
    36781 gatgtgacga cgctccgcga tagcgcggtg ctgtttgcgg tttgccatgg tgtggcctct
    36841 ttggttgtaa gttttgaaaa ctcaccatcc agagctgcga aactgtgggt ggcgagacgt
    36901 acggggttcg cagtaccggc aaccaaagaa cccggcccga ccgaagtcgg ccccgtacgc
    36961 cccgccataa ttcgtgtgcg aaaaagacgt ggcaatacag tacgcacaaa aaaaccgctg
    37021 gcgcggttgt gcgctttggt tgtcagcagg ctgcgaaacc cggcacccgt tttatgaggt
    37081 gcagcggaaa tgtaacctga ctgattgcgg catggcaagc ggtttttttg tgagaacggc
    37141 atactaaaaa aaatcctgat actgctccgg ccagcgattt tcactggccg ggtttaatta
    37201 cttcaccgga acaaacggaa cagcggtgtt gctggtcatg tattgcggca gcgtgccgtt
    37261 ccatttgttg attgcttcca gctccataac gccgggattc tggcgcagag cttcaccgcg
    37321 taaacgaatg gcgtcggctt cagcctgggc ttttgtgcga atggcatcag cctgtccggc
    37381 agcttctgcg cgcaacatgt tggcttctgc ttcgcgttgc ttgacttcct gttcgcgttg
    37441 cagggttttc tggtttgccg tgactttggc gttaatgctg tcgataacgg ttggcggata
    37501 ttccggttta ccgacataag agaggctcat gacctgaatg ccgataggtg tcatttctga
    37561 ctgaatgtct ttaagtgctg aatccagcag ttcagacttg ccaccgtcga taaacttatc
    37621 ggtggtcatt ttgctggcca gtcggttgag tgcatcggcg atcttctggc gcaggtcagt
    37681 gtcggtaatg tcatccacgc ctttgcggta ggtctgaaac acagtggtaa ctttggatgg
    37741 atcaactttg taggccacgc cgatgtgata gccgatggtt gtgccgtcac tcatctggaa
    37801 gttgaacggc tcatcgtaag tcttcatttg tttgaaagtc gggaagatgt aaacctctgt
    37861 attccagcct gtccagtagc ggccaacgcc aactacttca ccgacgcctt tatcgtcgcc
    37921 cagtttgttg actttgatgc ctacattgcc cggctccacg cggtcacagc caaccagaag
    37981 tgtggtcatc aggagaggga tgagtggtaa tagttttttc attgtttggt ttccataatt
    38041 gctttgatgt agttactgaa aaagcgaaca acgcccgccg ggtacagcaa ggcgacaaaa
    38101 atgcccagca ataccaggaa ggagctgtct gatgaaatca ttctgggaag tagccccaca
    38161 tacagaatga gagaaacgag gacgcatacc agcgcccaca tgtatgcgcg aaaccaggtc
    38221 tttttgttca tatcgcggtc ctttactggt taaggaaaaa atcaaaaacc ttgtcgatgc
    38281 gttgcagtag ctctcgttgc attgtttccg gcgtttctgg ttcaccaggc gaacccagtg
    38341 gtgcgcagaa atcagcgatt tcatgatgga gcgtcaggcg aatggctgga gacatggttc
    38401 tggcgtgctc cagctcatcc agcagtgcca gcacagcaga cggcgagagc attgcgcgaa
    38461 atgccagtaa tttttgaggt gttgccattc gttgcagggc aaatgccagt tcgcgtagct
    38521 tctggtggtt gatggtgctc atgttctggc ttccttcagt agctggttaa acatgtgagt
    38581 aagtggattg ctacacccga acggcatcgg gtttacgtgg taagaagcct ggcctccagt
    38641 tttgcgagcg cgaccacctg tgctgcggtt tgttctgatg actaagccgc cgcgccaaag
    38701 ttggcgtaac tcagcattaa tggctgtggt tggagtattc agtgctgcgg cgatctctcc
    38761 gccgctacac cccggatgag tagcgatgta gtccagaatg gtcatctgcg tggctcctgt
    38821 acctgtcgga taaggtttac ccgcgccaca ttagtggcgc agaagtaagt gccgtcagtg
    38881 aggtagatgt ggtgtgcatc cttttccgaa cgatgtttgt cgatagtggt aatcaggcgt
    38941 tcgtcgacct cgtattcgcg ccctctggag gtaaagcgaa cgacgggaaa atgcttaatt
    39001 gccattgcgc cccctttgtc cagtaactct atgcgttaaa tacggtgcac tgtgcgtcat
    39061 caatgaatgc gacttgagag cgctctatca ggcggagatt tgtcagaatt tctgattccc
    39121 ttatggggtg aggagtgatc aggtatttat cctgtaaccc ggcgataatg gtgtatcgct
    39181 gtagctccga gccaattgtg taaataaggc gtccggtgtt agacaaatcc agtccggtga
    39241 ctggttgtgt tctgagaacc gccagttcag catcctgttt tgcgataatt tcggctgctt
    39301 ctgccgtgac tcttgcgact atcagtgtgt gggttgcgac gtccatatga ttatttgcta
    39361 tggctttttt cgctacttcg ttttctgtct ttgaaatttc tttcagtgct ctgatgatac
    39421 cttcttcttt tgcgtgcatt tttgtatctc cgttatttgc gtatgcgaat acctccgtta
    39481 atacggatgg ttttcacgtt ttcttattta atttgatgtt ttatttgtat cgttattcac
    39541 cagtgaaaaa acgttcaatc ttttttactg aatgaataat tcgcataatt ccaatggcgc
    39601 aggccaccga aataatcaga acaagccatg agataaatat actcatgcga tattccccag
    39661 cttatacggt tcaatatgtt ccccgcattc tgcggcacag atcagctcgg aaagttcgtt
    39721 aagtgcatcc agatcatcag cgtaaaaagc gacgtcatac aaactccgga ttgccctggt
    39781 caatgagtca cgggctgcac gttcagcatg agcgcctgat gcacttaagc gaaaataaaa
    39841 acgctcaagt gctttgttaa tgagagtttt atattctttg cccatcacaa cgccctttaa
    39901 tctgctttct gtatttcagc ttctgaatcc atacaaataa tttcgatata gggttcatcg
    39961 ccattaactt ggcgtgcctt ttcagcttcg ctaatgattt ctcgtacggt ctggtacgga
    40021 agttccacaa gcagtcgcgt gccgttcaga taaacgtaag tggcttcgtc ggctccgttt
    40081 ttacccgccg gagtcactcc gtcaatagcg gatgcacgta ataacagttc accgcgaaaa
    40141 tcaataaagc ggataaatac accttgtgca tggtctttgg tcataaagca cccgttataa
    40201 atcagcctgt ttaataaaac tttgcccgcg aagcagacga gcaaccgtgc gaagtgcttc
    40261 gtataatgtg aaatcctgcc caaactgatt gtcgccacag ctcaatgcaa aaatgcggtt
    40321 tccggtaaac ggattgcgtg ggcatttgtg gatcacgatt ccagctttct caatcagcca
    40381 agcgtgctcg ccgatttgtt ttactgggta gccatccggc gttgcgtgtg tatcactcag
    40441 gctgtagcgg atgttgctgc gtgatgcact ggtagcgaaa cggttagcgt ggcgttcagc
    40501 accattacga aagcgtgaat tacgttgctg tttcatatca aaactccctg catctcatgc
    40561 agcaaaatta agaaagccta atcccaaatc ttccgccagc ttcttggctt tcttaagcca
    40621 gtgattgcgc caatctttac gctcaggagg aagctgtttc gttgcgtcat agaccatttc
    40681 gagccactca ttccaaagga tgagaagacg gcgcgaactc ccttcctcgc ctaaaacctc
    40741 gcgctcagta gttagaggga tgagtcgacg ctctaccaac tttcttacgg ctgattcggt
    40801 cttacctgta cggcgggaaa actcatcgac ggtgatgggg tctgggatct taaacaatgc
    40861 cctcaatagt tcttcattca tgtgataatc tccctgtttg gggtatttct tgcgacggat
    40921 gccccaaatc aaactcattt gtataaacat taatacagac gttggagaat tgcaacatgc
    40981 gtatgactat tggagagcgc ataaaaatca tgcgtgaaag cgagagactt actagcctcc
    41041 cggatacagc aaaaatgctt ggtttaaacc gtgatgctct gtggagatat gaaagcggta
    41101 aaactatccc taatgctgaa gtaattgagc aaatactaaa caaccccaga tttgagaaat
    41161 atgcgttgtg gtttatgact gggaaaattg cgcctgaatc cgggcagata gctccggctc
    41221 tcgcacacta tgggcaagag ccaacggact tacccccatc cgaaaggaaa attggctaac
    41281 cctttattat tcttacgttt tacaaactgg aaatgtcttt cctcgtttca ccggagggct
    41341 tgccaatggc aattaaagcg ctcgatggtg gacggtataa agtggatgtt agaccgcgtg
    41401 gccgaagtgg acgtcggatt cagcggattt ttaagaaaaa ggcagatgca gtggcctttg
    41461 agcgttatgt tctcagccac atgcacgata aggaatggct tgaaaagcca acagagcaac
    41521 gtcatctctc agatctgctt ccgttatggt gggaattggg tggacgcaat aagccatatg
    41581 ctaacggcgt tctaaccagg ttgaaaaaaa tcatcaaaga aatgaatgat ccaagggtta
    41641 gccagattaa tgctcgtttc atggccgctt atcgaagctc ccgtttatcc ttgggagtaa
    41701 aagagtctac tgttcggcgt gatgagtcgg atctcggagg aatgtttaca ctcctggcaa
    41761 atgccgggga atttcacgga gaaaatccgc tccgcgccct cccctctttg aaacgaaaat
    41821 cacccgaaat gacgtatctc accatggaag aaatcgccaa attactggat gcagtaagcg
    41881 gtgatgcccg gcggattacg ctactttgtc tcagtactgg ggcgagatgg ggagaagcga
    41941 aaaatctgcg cgcggaacac atcatcaata atcgcgtgac gtttaacaaa actaaaaacg
    42001 gaaaagttcg aattattcct gtctctgatg aagttgttag tgagatcaaa acaaagaaat
    42061 ccggcctttt gtttgacgtc aattatgagg aatatcgcaa ggtgcttcgc agtgttaagc
    42121 cagacctacc aaaaggacag gctgtacatg ttctacgcca tacctttgct gctcacttta
    42181 tgattaatgg aggaaatata cttacgctcc agcgaattat ggggcacgcc acgatccagc
    42241 aaactatgac ctatgcgcac ctcgctcctg atttcctcca ggatgcaatt tcacttaatc
    42301 cgttaaaagg aggcatccac atttcatcca cataagtggg ttttataggg taatcagtaa
    42361 cccccaccaa taacaaaacc cactgaaaac aaagggaaaa cattgaattc agtgggtttt
    42421 acaacgcacc ttcgggcgcg ttttttgttg acagcgtgaa aacagtacgg gtactgtact
    42481 aaagtcactt aaggaaacaa acatgaaaca cacaccgttt ttcttcgcat tcttttttac
    42541 cttcccctga atgggaggcg tttcgtcgtg tgaaacagaa tgcgaagacg aacaataagg
    42601 cctcccaaat cggggggcct tttttattga taacaaaaag gcaacactat gacatcggaa
    42661 aacccgttac tggcgctgcg agagaaaatc agcgcgctgg atgaaaaatt attagcatta
    42721 ctggcagagc ggcgcgaatt ggccgtcgag gtaggaaaag ccaaactgct ctcgcatcgc
    42781 ccggtacgag atattgatcg tgaacgcgat ttactggaaa gattaattac gctcggtaaa
    42841 gcgcaccatc tggacgccca ttacattact cgcctgttcc agctcatcat tgaagattcc
    42901 gtattaactc agcaggcttt gctccagcaa catctcaata aaattaatcc gcactcagca
    42961 cgcatcgctt ttctcggccc caaaggttct tattcccatc ttgcggcgcg ccagtatgct
    43021 gcccgtcact ttgagcaatt cattgaaagt ggctgcgcca aatttgccga tatttttaat
    43081 caggtggaaa ccggccaggc cgactatgcc gtcgtaccga ttgaaaatac cagctccggt
    43141 gccataaacg acgtttacga tctgctgcaa cataccagct tgtcgattgt tggcgagatg
    43201 acgttaacta tcgaccattg tttgttggtc tccggcacga ctgatttatc caccattaat
    43261 acggtctaca gccatccgca gccattccag caatgcagca aattccttaa tcgttatcct
    43321 cactggaaga ttgaatatac cgaaagtacg tctgcggcaa tggaaaaggt tgcacaggca
    43381 aaatcaccgc atgttgctgc gttgggaagc gaagctggcg gcactttgta cggtttgcag
    43441 gtactggagc gtattgaagc gaatcagcaa caaaacttca cccgatttgt ggtgttggca
    43501 cgtaaagcca ttaacgtgtc tgaccaggtt ccggcgaaaa cgacgttgtt aatggcgacc
    43561 gggcaacaag ccggtgcgct ggttgaagcg ttgctggtgc tgcgcaacca caatctgatt
    43621 atgacccgtc tggaatcacg cccgattcac ggtaatccat gggaagagat gttttatctg
    43681 gatattcagg ccaatcttga atcagcggaa atgcaaaaag cattgaaaga gttaggggaa
    43741 attacccgtt caatgaaggt attgggctgt tacccaagtg agaacgtagt gcctgttgat
    43801 ccaacctgat gaaaaggtgc cggatgatgt gaatcatccg gcactggatt attactggcg
    43861 gttgtcattc gcctgacgca ataacacgcg gctttcactc tgaaaacgct gtgcgtaatc
    43921 gccgaaccag tgctccacct tgcggaaact gtcaataaac gcctgcttat cgccctgctc
    43981 cagcaactca atcgcctcgc cgaaacgctt atagtaacgt ttgattaacg ccagattacg
    44041 ctctgacgac ataatgatgt cggcataaag ctgcggatcc tgagcaaaca gtcgcccgac
    44101 catcgccagc tcaaggcggt aaatcggcga agagagcgcc agaagttgct caagctgaac
    44161 attttcttct gccaggtgca gcccgtaagc aaaagtagca aagtggcgca gagcctgaat
    44221 aaacgccata ttctgatcgt gctcgacagc gctaatacga tgcagccgag cgccccagac
    44281 ctgaatttgc tccagaaacc attggtatgc ttccggctta cgtccatcac accagaccac
    44341 aacttgcttt gccaggctac cgctgtccgg gccgaacatc gggtgtaacc ccagtaccgg
    44401 gccatcgtgc gccgccagca tggcctgtaa tggtccattt ttcactgatg ccagatcaac
    44461 cagaatacaa tctttcggta aaggcggtaa tttgccgata acttgctcag taacgtggat
    44521 tggcacacta acaatcacca ttccggcatc ggcaacaata tcagccgctc gatcccagtc
    44581 atgttgctcc agaatccgca cctgataacc cgatagtgtc agcatcttct cgaacaggcg
    44641 tcccatctga ccgccaccgc cgacgataac caccggacgc agtgacggac aaagtgtttt
    44701 aaatcctttg tcgttttcac tggagtaaga ttcacgcatc atccgacgca aaacatcctc
    44761 aatcagatct ggcggtacac ccagagcttc cgcctctgca cgacgcgagg ccaacataga
    44821 tgcctcgcgc tccggaacat aaataggcag tccaaagcgg cttttcacct cgcccacttc
    44881 agcaaccagt tccagacgct tcgctaataa attcagcagc gctttatcga cttcatcaat
    44941 ttgatcgcgt aatgcggtca attcagcaac cataataaac ctcttaagcc acgcgagccg
    45001 taagctgccc gttcagatcc tgatgaattt cacgcagcaa ggcatcggtc atttcccagc
    45061 taatgcaggc atcggttacg gatacaccgt atttcatttc actgcgcggt tgctcggaag
    45121 actgattgcc ctcgtggata ttactttcga tcatcagacc aataattgag cgattgccat
    45181 ctttgatttg agcaaccacg gattctgcca ccgcaggctg acggcgataa tctttattgg
    45241 aattaccgtg gctgcaatct accatcagag acgggcgcag tcccgcctgt tccatctctt
    45301 tttcacattg cgcaacatcc gcagggctat agttcggcgc tttaccaccg cgcaggatga
    45361 catgcccgtc cggattcccc tgagtttgta gcaacgcaac ctgccctgcc tggttaatgc
    45421 caacaaaacg gtgcggctgg gcggcggcgc gcatagcgtt aattgctgtt gccagactgc
    45481 cgtcggtgcc gtttttaaaa ccaaccggca tggaaagccc ggaggccatt tcacggtgag
    45541 tttgcgattc cgttgtacga gcaccaattg ctgaccagct aaacagatcg cccaggtatt
    45601 gcgggctatt cggatctaac gcttccgtcg ccagtggcag tcccatattc accagctcaa
    45661 gcagcaattt acgcgcgatc tgcagcccgg cttctacatc aaaagagcca tccatatggg
    45721 gatcgttaat taaccctttc cagccgacag tggtacgggg tttttcaaaa tagacgcgca
    45781 ttaccagata gaggctatcg ctgacctctg cggcaagggc tttaaatcga cgagcatatt
    45841 ccagagcagt ttccggatca tgaatggaac aaggaccaca tactaccagc agacgaggat
    45901 cgcgcccggc gataatatct gaaatggttc tacgcgagtc agcaatctgg gcttcttgtt
    45961 gcaggctcaa tggaaaagcg gccttcagtt gttccggagt cattaaaacc tgttcgtcgg
    46021 taatatgtac gttattcagc gcgtcttttt gcatgatggc gatcctgttt atgctcgttt
    46081 gcgatagttg atcctcagcg aggatgacgt aacgataaca cataaagtaa agttttcaat
    46141 ccatatttcg tacattttta tttacacagg caatttagtc gcgatttcaa cccttacttc
    46201 tgtatagata aatttacact cccttagaaa acaatccgct atgctttgaa aaaggagaaa
    46261 gaaatgatga aaaagtttat cgcccccttg ttggctttac tggttagcgg atgtcagatt
    46321 gatccttata ctcacgcgcc aactttgacc agcaccgact ggtatgatgt tggtatggaa
    46381 gatgcgatat cgggcagcgc cataaaagat gacgatgcat ttagcgattc acaggcggat
    46441 cgcggtctat accttaaagg atatgccgaa ggacaaaaga aaacttgcca gaccgatttt
    46501 acttatgccc gaggactttc cggtaaaagc tttcctgcca gctgcaacaa tgttgaaaat
    46561 gccagccaac tgcatgaagt atggcaaaaa ggggctgatg aaaatgccag cacaatacga
    46621 ttaaattaat taaaacccca caaataaatt aaacataaga ttttactcat tgtgttttat
    46681 ttctcacatt gatgacgatc gcatgaaaaa atgatatttt aatgagcatt ctgaaaaaat
    46741 atcgatgcat ttcgagcgaa gatggtgggg atccctgaat gcgtttttct caccgactgt
    46801 tcttacttct gattctcctg ctgacgggag caccaatact cgctcaggag ccttctgacg
    46861 ttgcgaaaaa cgtgcgtatg atggtttccg gtattgtcag ttacacccgc tggcctgcgc
    46921 tatcagggcc accaaagtta tgtatctttt catcttcacg ttttagtacc gccctacaag
    46981 agaatgccgc gacatctttg ccttatctgc ctgtcatcat tcacactcaa caagaggcga
    47041 tgatttcagg ctgcaatggt ttttattttg gcaacgagtc accgacattc cagatggaat
    47101 taaccgaaca atatccgtca aaggcgttat tattaattgc cgaacaaaat accgagtgca
    47161 ttattggtag cgccttttgt ctgatcatcc acaataatga cgtcagattt gccgtaaacc
    47221 tggatgcctt atcgcgtagc ggtgtaaagg tcaacccgga tgtcttaatg ctcgcacgga
    47281 agaaaaatga tggataacga taattctctt aataagcgcc ccacgtttaa aagagcatta
    47341 cgcaacatca gtatgaccag catatttatc actatgatgc tgatctggtt gctgctttcc
    47401 gtgacctcgg tgctgaccct gaaacagtac gcgcaaaaaa acctggcact gacagcagca
    47461 acaatgactt acagtctgga agcagctgtc gtttttgccg atggccctgc agcaactgaa
    47521 acactggcag cgctgggcca gcaagggcaa ttttcaactg cagaagtacg tgataagcag
    47581 caaaatattc tggcatcctg gcattacacc cgtaaggatc caggcgatac tttcagcaat
    47641 ttcataagcc actggctctt ccctgccccc atcattcagc cgattcgtca caatggcgaa
    47701 accattggcg aagtacgctt aaccgctcgc gacagttcaa tcagccattt tatctggttt
    47761 tcgctcgccg tactgaccgg ttgtattctg ctggcatcag gaatcgcaat taccctcacc
    47821 cgccatttgc acaatggcct ggtggaagca ctgaaaaata tcaccgatgt cgtacatgat
    47881 gtgcgttcca accgcaattt ttcccgacga gtttcggaag aacgtatcgc tgagtttcac
    47941 cgcttcgctc tcgacttcaa cagtctgctg gatgaaatgg aagagtggca gcttcgttta
    48001 caggctaaaa atgcgcagct tctacgtacc gcgctacatg acccattaac cgggctggct
    48061 aaccgcgcag cgtttcgtag cggcatcaac acgttgatga acaattccga tgcccgaaaa
    48121 acgtcggcgt tactatttct tgatggcgat aatttcaaat acatcaatga tacctggggt
    48181 catgcgacgg gcgatagagt cttgattgaa atcgcaaaac ggttagctga agttggcggg
    48241 ctgcgacata aagcataccg cctgggcggc gatgaattcg ctatggtgct ctatgatgta
    48301 cagtcagaat ctgaagtgca gcagatatgc tcagcactga cacaaatctt taatctcccg
    48361 tttgatcttc ataatggcca tcagaccacc atgacattaa gcattggtta cgcgatgacc
    48421 attgagcacg cctctgcaga aaaattacaa gagcttgccg atcacaatat gtatcaggcc
    48481 aaacaccagc gtgccgaaaa gctggtgaga taacaaggat atatcgatat gataaagcac
    48541 ctggtagcac ccctgatttt cacctcacta atactgactg gctgccagtc ccctcaggga
    48601 aagtttactc ctgagcaagt cgccgctatg caatcttatg gatttactga atccgccggc
    48661 gactggtcgc tgggcttatc agatgccatt ctgttcgcaa aaaatgacta caaattgctc
    48721 ccggaaagcc agcaacagat ccaaaccatg gcagccaaat tggcctcgac agggctaaca
    48781 catgcccgta tggatggaca caccgataac tatggtgaag acagttacaa cgaaggctta
    48841 tcattgaaac gggcgaatgt cgtggccgat gcatgggcta tgggtggaca aattccacgc
    48901 agcaatctca ccacacaggg tttaggaaaa aaatatccca tagccagtaa caagaccgcc
    48961 cagggccgcg ccgagaaccg ccgcgtcgca gtggtgatta caacccctta aaacacgagc
    49021 aaacagacaa aaaaagggcc agccaattgg ccagcccttc ttaacaggat gtcgcttaag
    49081 cgaaatctta gttaagacgc tctttgatac gagcagcctt accagtacgc tcacgcaggt
    49141 agtacagttt agctttacga acagcaccac gacgtttgac agaaatgctg tcaactaccg
    49201 gagagtgagt ctggaagaca cgctcaacgc cttcgccgtt ggaaatttta cgaacagtga
    49261 atgcagagtg cagaccgcgg ttacgaatag cgataaccac gccctcgaat gcctgcagac
    49321 gttttttgga accttcaaca acccatactt tcacttccac ggtatcaccc ggacggaagg
    49381 aaggtacgtc ctgcttcatc tgctcttgtt caagttgctt aataatgttg ctcataattt
    49441 aatctcttat cctgggtaaa ctgatatctc gggggcttac gccatcccat catgtttatg
    49501 ttgctgttgt gcgtgttccg ttttgaactc cgccagcaac cttgcttgct cttcagtcag
    49561 agccaggttt tccagaagtt caggtcttct aagccaggta cggcccagcg actgtttcaa
    49621 acgccagcga cgtatctcgg catggttgcc cgacagtaac actggcggaa cttccatccc
    49681 ttctaacacc tcaggccgcg tatagtgcgg gcaatccagc aatccttcag caaaggaatc
    49741 ttccgttgcc gaggcttcat gtcccagtac tcccggaata aaccgggaaa cggagtcaat
    49801 cagcgtcatt gctggtaact caccaccact gagaacgtaa tcgccgattg accattcttc
    49861 gtcaatttcg gtttggatca cgcgctcatc tataccttcg tagcgaccgc acaccagaat
    49921 caatttttga ttcgttgcca gttcgctgac gcccgcttga tcaagcttgc gtccctgtgg
    49981 tgacagataa atcacctttg cgccttcacc cgccgcggct tttgctgcat gaatggcgtc
    50041 ccgcaagggt tgcaccatca ttaacatccc cggtccgccg ccgtaaggac gatcgtccac
    50101 ggtacggtgc cggtcatgcg tgaagtcgcg aggactccaa ctctggatgc tcagcaggcc
    50161 atttttaact gcccggccag ttaccccgta atcggtaatt gcgcggaaca tttcaggaaa
    50221 caggctaatt atgccaatcc acatagcgcc gtcttttacc gtttatccgg tggtttaaaa
    50281 accaggatcc caatctactt cgattgaacg agtagtgaga tcgactttct tgataacctg
    50341 cccatcgagg aacggtacga gacgttcctt gataccaaac gcatctttca ggtttgcctt
    50401 aatgacgaga acgtcattag atccggtttc catcatatcg acgactttac cgagatcgta
    50461 gccttcagtg gttactacct ggcagcccat caggtctttc cagtagtagt ccccctcttc
    50521 aagctgaggc agctgcgatg aatccacgac aatttcacaa ttcgtcagca ggttcgccgc
    50581 atcacgatcg tcaacgcctt tcagcttgat gatcatgtcc tgattgtggt gcttccagct
    50641 ttccagctgg acttgctgcc actgacccgc cttctggata aaccagggct gatagtcaaa
    50701 aatgctttcg gcgtcttcgg tggaagaaaa cactctgagc cacccacgaa taccgtaaga
    50761 cgaacccatt tttcccaaaa cgatgggatc aacaggtgct tgcgcggtga gttgtttgct
    50821 catcatgacc accgtgacag attaagctgc tttgtttact tctttgatca gcgcagcaac
    50881 gcgatcagaa atagttgcgc cctggccaac ccagtgagcg atgcgatcca gatccaggcg
    50941 agtgccttct tctttttcgc tagcgattgg gttgaagaaa ccaacgcgct cgatgaagcg
    51001 accgttgcgt gcattacggc tgtcagcgac aacaacctgg tagaacggac gctttttagc
    51061 gccgtgacgt gctaaacgaa tagttaccat aacatcctct tgtgtgaata aaacaaccgg
    51121 accccatcga ggaacggagt ccggtgtcat attaaaagcc cgaaaatttt actgatttct
    51181 ggagaaaatg caatcagcag ttaataactc tgtcgcataa ggtcatttag cgaccaggaa
    51241 atcccggcgg catcatcccc ttcatgcttc tcatcatctt cgccattccg cctttcttca
    51301 ttttcttcat catgcgctgc atgtcgtcga actgcttcag aaggcggttc acgtcctgca
    51361 cctgcatacc gcaaccggca gcgatacgac gcttacgcga acctttgatg atttctggct
    51421 tagcgcgctc tttcatcgtc atcgagttga tgatggcttc catacgcacc agcactttat
    51481 cgtccatctg cgacttaaca ttatccggga tctgccccat gcccggcagc ttgcccatca
    51541 ggctagccat gccgcccata tttttcatct ggcgcagttg ctcaagaaaa tcgttgagat
    51601 cgaagccgtc gccttttttc agcttgctgg ctaatttctc tgcctgcgcg cggtcaactt
    51661 tgctttcgat atcttcgatc agcgacagta cgtcgcccat gccgagaata cgcgacgcga
    51721 tgcggtccgg atggaacggc tccagcgcct cagttttctc gccaacaccg agaaacttga
    51781 tcggtttgcc agtgatgtga cgaatagaga gcgccgcacc gccgcgggca tcgccgtcca
    51841 ctttggtcaa cactacgccg gtaagcggta acgcttcatt gaatgctttt gccgtattgg
    51901 ccgcatcctg accggtcatg gcgtcaacca caaacagggt ttcaaccggg ttaatcgacg
    51961 catggacttg tttgatctcg tccatcatcg cttcgtcaac gtgcagacga ccagcggtat
    52021 ccaccagcag cacgtcgtag aatttcagtt tggcttcttt cagcgccgcg ttaacgatat
    52081 ctaccggctt ctgaccaaca tcagaaggga agaaatcaac gcccacctgc tctgccagcg
    52141 tctcaagctg tttgattgcc gccgggcgat aaacgtcggc agaaaccacc agcactttct
    52201 tcttgtgctt ctcgcgcagg aacttaccga gtttaccaac gctggttgtt ttaccggcac
    52261 cttgcaggcc cgccatcagc acgaccgcag gcggttgcgc cgccaggttc agggtctggt
    52321 tctcttcgcc catcgccgca accagttcgt tacggacgat tttgacgaac tcctgccccg
    52381 gcgtcaggct cttattaact tcatgaccaa ccgctttctc ttttacgcga ttgataaact
    52441 cacgcactac cggcagagcg acatccgcct ccagcagcgc catgcgcact tcgcgcagcg
    52501 tatcttttac gttgtcttca gtgaggcgtc cacggccact gatattgcgc agcgtgcgcg
    52561 acaaacgatc ggttaaatta tcaaacattg tctctcgcct ggggtggaaa cggttggccg
    52621 caatcgcgac acatcatcag tattttgccg cagtataaca tgaaggcgtc tttgttgtta
    52681 tgcaacggtt ggagcagcgt tcacctgacg ctatactgct tctctttctt attgctcaaa
    52741 ctgtcgacat cactatgccc gtttttgctc tgctcgcgct tgtcgcctac tccgtcagtc
    52801 ttgcgctgat tgttcccggt ctgctgcaaa aaaacggcgg ctggcggcgc atggctatta
    52861 tttctgcggt cattgcgctg gtctgccacg caatcgctct ggaagcccgc atcctgcccg
    52921 acggtgatag cggacaaaac ctcagcctgc tgaacgttgg ttcattggtc agtttgatga
    52981 tctgtacggt aatgaccatt gtggcttctc gcaatcgtgg ctggttgctg ctacccattg
    53041 tctatgcctt tgcgcttatc aacctggcgc tggcgacctt catgcccaat gaatacatca
    53101 cccatctgga agcaacgcct gggatgctgg tgcacattgg cttatcgctc ttttcctatg
    53161 ccacgctaat tatcgccgcc ctgtacgcgc tgcaactggc gtggattgat taccaactga
    53221 agaacaagaa gctggcattt aaccaggaaa tgccgccatt gatgagtatc gagcgtaaaa
    53281 tgttccacat cacgcagatt ggcgtggtgc tgctaacgct cacgctttgc actggcctgt
    53341 tctacatgca caacctattt agcatggaaa atatcgacaa ggctgtgctc tctatcgtgg
    53401 cgtggtttgt ctatattgtg ctgctgtggg gacattacca tgaaggatgg cgtggacgcc
    53461 gcgtcgtctg gtttaacgtt gcgggcgcgg taattctgac actggcctac ttcggcagcc
    53521 gaattgtcca gcagttaatc agctaaaccc agaaaaggag tttcccctgg aacacatttc
    53581 tactactacg ttgatcatta ttctgatcat catggtggtc atttcagcct atttttccgg
    53641 gtccgaaacc ggaatgatga ccctcaaccg ctatcgtctg cgacatatgg cgaaacaggg
    53701 taatcgctcg gccaaacgcg tcgaaaaatt gctgcgtaag ccagaccgcc tgataagcct
    53761 ggtgttaatc ggcaataacc tggtcaatat tcttgcctcc gcgctcggca ctattgttgg
    53821 aatgcgtttg tacggcgatg cgggcgtggc aattgcgact ggtgtgctga cttttgtcgt
    53881 actggtattt gctgaggtat tgccgaaaac cattgccgcg ctgtacccgg aaaaagtcgc
    53941 ttatccgagt agttttctgc tggctccgct gcaaattttg atgatgccgc tggtctggtt
    54001 gctgaacgct atcacccgca tgttaatgcg catgatgggc atcaaaaccg atatcgtggt
    54061 cagcggctct ttgagcaaag aagagttgcg cactatcgtg catgaatcgc gctcacaaat
    54121 ttcccgtcgc aatcaggata tgctgctgtc ggtgctcgat ctggaaaaaa tgaccgttga
    54181 tgacatcatg gtgccgcgca gtgaaattat cggtattgat atcaacgatg actggaaatc
    54241 gattctgcgc caactctccc actcacctca cgggcgcatc gtgctctacc gtgattcgct
    54301 ggacgacgcc atcagtatgc tgcgtgtgcg tgaagcctgg cggttgatgt cggagaaaaa
    54361 agagttcacc aaagaaacca tgctacgcgc cgcggacgag atctattttg tcccggaagg
    54421 tacgccgctc agcacgcagt tggtgaaatt tcagcgcaac aaaaagaaag tcggcctggt
    54481 cgtcaacgag tatggagaca ttcaggggct ggtgacggtt gaagatattc tggaagagat
    54541 tgtcggcgat ttcactacgt cgatgtcgcc aacacttgcc gaagaggtca cgccgcaaaa
    54601 cgacggttcg gtgattattg atggcactgc caacgtgcgg gaaatcaaca aagcctttaa
    54661 ctggcatcta cctgaagacg atgcccgcac ggttaatggc gtcattcttg aagctctgga
    54721 agagatccct gtcgctggca cccgcgtgca tattggcgag tacgatatcg atattctcga
    54781 agttcaggac aatatgatta agcaggtaaa agtctttcct gtaaaaccgc tgcgcgagag
    54841 tgtggcggag taacgaaaac ggccctgcat tcgcatgcag ggccgtgaat tattacgaaa
    54901 acagaaatta cgcttttgct ttcgctacag ttaccatcgc cgcacgaatc gtacgaccat
    54961 tcagcgtata acccttctgc ataatgccca gtacgttacc tggcgcaacg tcatcagatt
    55021 ccaccattgc gatagcctga tgcacattcg ggtccagcgg cacgttagtt tcggcgatca
    55081 cttcaacacc aaacttacgc acaacatcca gcatcgactt cagcgtcagc tcaatgcctt
    55141 caaccatcgc agacatatcc gggttagctt tatcagccac ttccagcgca cgatccaggc
    55201 tatcaatcac cggcagcaat tcgttgatga atttctccag cgcgaatttg tgggcttttt
    55261 caatatccag ttcagtacgt cgacgcaggt tttccatttc ggcttttaca cgcaaaatgc
    55321 cgtcacgttc acgggtctgg gcttcagcca gctgagcttc gagattcgca attttttcat
    55381 cgcgcggatc cacctgctca gcagaagctt ctggctcaac tgcctcaatc tcttcgtgct
    55441 gatccatgat aatttcttcc ggggcttgcc cctcaggcgt tttctgttct ttactactca
    55501 tgaatttctc cgcgtttttt tcgcattcat ctcgctaact tcgcttatta tggggatcag
    55561 tttcagggtt tcaagggaag cactcacatt gtcatcaatc ttcgcaacaa ggacctcgga
    55621 aaaatgaata atcatttcaa gtgtattggc attgtgggac acccacggca ccctactgca
    55681 ctgacaacac atgaaatgct ctaccgctgg ctgtgcacaa aaggttacga ggtcatcgtt
    55741 gagcaacaaa tcgctcacga actgcaactg aagaatgtga aaactggcac gctcgcggag
    55801 attgggcaac tagctgatct cgcggtagtc gttggtggcg acggtaatat gctgggcgcg
    55861 gcgcgcacac tcgcccgtta cgatattaaa gttattggaa tcaaccgtgg caacctgggt
    55921 ttcttgactg accttgaccc cgataacgcc cagcaacagt tagccgatgt gctggaaggc
    55981 cactacatca gcgagaaacg ttttttgctg gaagcgcaag tctgtcagca agattgccag
    56041 aaacgcatca gcaccgcgat aaatgaagtg gtgcttcatc caggcaaagt ggcgcatatg
    56101 attgagttcg aagtgtatat cgacgagatc tttgcgtttt ctcagcgatc tgatggacta
    56161 attatttcga cgccaacagg ctccaccgcc tattccctct ctgcaggcgg tcctattctg
    56221 accccctctc tggatgcgat taccctggtg cccatgttcc cgcatacgtt gtcagcacga
    56281 ccactggtca taaacagcag cagcacgatc cgtctgcgtt tttcgcatcg ccgtaacgac
    56341 ctggaaatca gttgcgacag ccagatagca ctgccgattc aggaaggtga agatgtcctg
    56401 attcgtcgct gtgattacca tctgaatctg attcatccga aagattacag ttatttcaac
    56461 acattaagca ccaagctcgg ctggtcaaaa aaattattct aattttacgc cagcctcttt
    56521 actgtatata aaaccagttt atactgtaca caataacagt aatggttttt catacaggaa
    56581 aacgactatg ttggcacaac tgaccatcag caactttgct atcgttcgtg agcttgagat
    56641 tgattttcat agcggcatga ccgtaataac tggcgagacc ggcgcgggta aatctattgc
    56701 aatagatgcc ctcggtcttt gtctcggtgg tcgcgctgaa gccgacatgg tgcgtaccgg
    56761 cgctgctcgc gctgacctgt gcgcccgttt ttctctgaaa gatacgccag cggctctgcg
    56821 ctggctggaa gaaaatcagc ttgaagacgg gcatgaatgt ttgcttcgtc gagtgatcag
    56881 cagcgatggt cgctcccgtg gtttcatcaa cggtacagct gttcctctgt cacaactgcg
    56941 cgaactgggt cagttgctga ttcagatcca tggtcagcac gctcatcaat tactcaccaa
    57001 acctgagcac caaaaattcc tgcttgatgg ctatgccaat gaaacctctc tactgcagga
    57061 aatgaccgca cgttatcagt tgtggcatca aagctgccgt gacctcgcgc atcatcaaca
    57121 gttaagtcag gaacgcgccg cccgtgcgga actgctgcaa taccaattaa aagaacttaa
    57181 cgaatttaat ccgcagcccg gagagtttga acaaatcgac gaagagtaca aacgtctggc
    57241 gaacagcggt caattgctga ccaccagcca gaatgcattg gcattaatgg ccgacggtga
    57301 agacgcaaac ctgcaaagtc agctttacac ggctaaacaa ctggtgagcg aattgattgg
    57361 catggacagc aaactgtccg gcgtacttga tatgctggaa gaagctacca tccagattgc
    57421 tgaagccagc gatgaactgc gccactactg cgatcgtctg gatctcgatc ccaaccgact
    57481 atttgaactt gaacagcgca tctcaaaaca gatttcgctg gcacgtaaac atcacgtcag
    57541 ccctgaggca ttgccacagt attaccagtc gctactggaa gaacagcagc aactggacga
    57601 tcaggccgac tcacaagaaa cgcttgcgct ggcggtaacg aaacatcatc agcaggcact
    57661 ggaaatcgcg cgcgcattac accaacaacg ccagcaatat gcagaagaac ttgcacagct
    57721 gatcaccgac agtatgcatg cgctctcaat gccgcatggg cagtttacga tcgatgttaa
    57781 atttgacgag catcacctgg gcgctgacgg tgccgatcgt attgagtttc gggtaaccac
    57841 caacccaggt cagccaatgc agcctattgc caaagtcgca tccggtggtg aattgtcccg
    57901 catcgcactg gcaatccagg tcatcacggc gcgtaaaatg gaaaccccgg cactgatttt
    57961 tgatgaagtg gatgtaggta ttagcggtcc aacagcggca gttgtcggca aactgctgcg
    58021 tcaactcggc gaatcaactc aggtgatgtg tgttacccac ctgccacaag tcgcgggatg
    58081 tggtcatcaa cactattttg tcagcaaaga aaccgatggt gcgatgacag aaacgcatat
    58141 gcaatccctg aataaaaaag cgcggttaca agagctggcg cgcctgcttg gtggcagtga
    58201 agtcacacgt aatacactgg cgaatgcgaa agaactgctt gcagcgtaaa cttttttcct
    58261 gcttcacggt cagagtaaac agcaaaacgc cgtaagaccg gaaagcaaaa ggttttaaag
    58321 tgatgaaagg tctattatca tcggcatatt acagatgagc cacgtactgc tcgggcccga
    58381 aaaggaatca aatcactatg cgctgtaaaa cgctgactgc tgcagcagca gtactattga
    58441 tgttgaccgc aggctgttcc actctggagc gagtggttta ccgtcctgac atcaaccagg
    58501 ggaactatct gaccgctaac gacgtatcca aaatacgtgt tggcatgacg caacaacaag
    58561 ttgcgtacgc attgggtaca ccgctgatgt ccgatccatt tggtacgaat acctggttct
    58621 atgtcttccg ccagcaacca ggtcatgaag gtgtaacgca gcaaacgctg acgctgacct
    58681 ttaacagtag cggtgtgttg accaatattg ataacaaacc tgcgctgagt ggtaactaat
    58741 aataaagttg ctctcaaaga cgttaaaaaa ggtgctcaat gagcaccttt tttctgtctg
    58801 ttatttattc gctgattttt ctgctcgttg cctgcgaagc tctttcggat cggcaatgag
    58861 agggcgataa atctccaccc gatcgccatc atgcacacta tcgcttagtt ttgccggacg
    58921 gctgtaaatg ccgactttgt ttttagttaa atcgatatcg gtacgcaatt ccagcaagcc
    58981 actggcgcga atagcttctt caaccgtcgc gccctcctgc agcgtcacgc gctgcaggta
    59041 ctgcttctca ggtagcgcat aagccacctc aacggcaatt ttacctggca ctgtaaacct
    59101 ctttcgcacg aaccgtaaaa gcctggacca tattagacgc cagctcttta aacacgcgac
    59161 caaaggcgag ttcaatcaac ttattggtaa actcaaagtc gagatgaaac tcgatacgac
    59221 acgcctcctg gctcagcggc gtaaacttcc atccaccaat caatttcttg aacggcccat
    59281 ccaccagatt cataagaata ctttggttac tggtcaactg gttgcgggta gtaaacgttt
    59341 tgctgatccc agccttagag acatctaccg ccgcagtcat ctgcccagga gtggactcca
    59401 gaatccgact tccggtacaa cccggcaaaa actgaggata agactgaacg tcattcacta
    59461 actgatacat ttgctccgcg ctgtagggta ccagtgcggt ccggctaatc tgaggcataa
    59521 caatttccat caacaaaaat ccaacaaata atatcattta tcctgctgta aaaaaaacgc
    59581 tatcccggcg ctgggtaaca tcgggttcat gctaagatag agccttgtcc cccgcaggat
    59641 tgatatgggg tgttttcgat ttcagattac cgatgattca cgacgcttat gacgaagaaa
    59701 aaagcacata aacctggttc agcgaccatc gcgcttaaca agcgcgcccg tcacgaatac
    59761 tttatcgaag aagagttcga agcgggactt gccctgcaag gctgggaggt taaatccctg
    59821 cgcgcaggaa aagccaatat cagcgacagc tacgtccttc tgcgtgacgg agaggcattt
    59881 ctgtttggcg ctaacatcac gccaatggcc gtggcctcca cgcatgtggt gtgcgatcct
    59941 acccgtaccc gcaagttact tctcaaccag cgcgaactgg actcattgta cggtcgcgtc
    60001 aatcgagaag gctataccgt agtggcgctc tccctgtact ggaaaaatgc ctggtgcaaa
    60061 gtgaaaatcg gcgtcgccaa aggtaaaaaa cagcacgata aacgttcaga tatcaaagaa
    60121 cgcgaatggc aggtggataa agcacgtatc atgaaaaacg cccaccgtta aacctgcact
    60181 ccaattattg accagttcct caccgcgcct ccctctccgg cggcgcgaat caacatctta
    60241 ttggctatca catccgacac aaatgttgcc atcccattgc ttaatcgaat aaaaatcagg
    60301 ctacatgggt gctaaatctt taacgataac gccattgagg ctggtcatgg cgctcataaa
    60361 tctggtatac ttacctttac acattggggc tgattctgga ttcgacggga tttgcgaaac
    60421 ccaaggtgca tgccgagggg cggttggcct cgtaaaaagc cgcaaaaaat agtcgcaaac
    60481 gacgaaaact acgctttagc agcttaataa cctgcttaga gccctctctc cctagcctcc
    60541 gctcttagga cggggatcaa gagaggtcaa acccaaaaga gatcgcgtgg aagccctgcc
    60601 tggggttgaa gcgttaaaac ttaatcaggc tagtttgtta gtggcgtgtc cgtccgcagc
    60661 tggcaagcga atgtaaagac tgactaagca tgtagtaccg aggatgtagg aatttcggac
    60721 gcgggttcaa ctcccgccag ctccaccaat catgattgga cggtataagg acaacaccaa
    60781 taaaaacagg aagttagcag tctcagcagg acaccgacca gacggtgaag agacataaaa
    60841 ggatacgcaa aggagccgcg gctcctggtg acatgaaagc ccacagatgt gggctttttc
    60901 gttgatggtc agaacgacca gttcacacca gctaccccgt tccacgggga ttccacaccg
    60961 gcaccatggc tataccccac cccaagatgc ccgcttaacg tactgctgaa tgaggcttta
    61021 atacctgcct ggtatattcc acgtctgccc gacaaatcat tgacgaaatt accgtcacta
    61081 ttcactttca cccggttatc atcgacaaat tctttgcgca cagccgcctt cagccacggc
    61141 tcaacttcca taccgttccc cagacgcatg ttgtaactca gcgttgcacc cagttcacga
    61201 tataaactgc gggtatcgac tgatttcgat tccatgccat tggataaatg atattcaggg
    61261 ttatcagcgg tgaacccccg ttaacgatgc atacggcgtc aggttccagt taccatcggt
    61321 aaatcgcatc ccggtttcaa tgtgaccgcc cagcccgttg ctgcgataac tgccgttggc
    61381 ggctccaccg ctgccaaccg tggagtcgcg agcttcggta cctgctaata ccaataaatt
    61441 accgccattt tccagcaaca tattggtcgc taaattgccg gaaatggaaa aagtgccgta
    61501 ctggtgagta ccgctgattt caataccgtt agccgtgctc gtctggagag cggcaccgct
    61561 gttctggacg atatctgtcg ctttgccatt atcgttaact gtcagcgtac cgccttcatt
    61621 gatctttgtt tttattgcct ctccgttagc tgaaactgtt tgtattccgc cgtcgttaat
    61681 cgttgtctca ttcgccaccc cctcgacgat ttgttcgccg ccggtgagcg tcgtgcctgt
    61741 cgcagtggct tttgttttga cgatctcccg tccgcccgta ttgacctgtg ttttgtcaga
    61801 agaggtgtct gactccatgg ttaacacgcc gccatttgcc agcaggatat tgttcgccgc
    61861 accctgctcg atgctgaacg cgacgccatc cgcgcgtgtt cctgtgaccc gcgtcgccct
    61921 ggtggttgca accaaagcgt cctggctact ctgctgtatc cccgttgcgc tgcctttctc
    61981 ccgcacatcg agtgtgccgc cgtcattaag caccgagttt tcagccagac cgccctcatt
    62041 aactacctgt gaacacccat taataatgga accttccgct gtcccgtttg ccataatttg
    62101 ttgtaggcca gagacgatat cggtattgat tgccttacca taattctgaa cggtttgcgt
    62161 gccaccattg atgtgtgttt tctctgttga cccaccatca acaatttgtt caccactttc
    62221 gatatttgcc tcagtggcta atccatatac cgtttgcttg ccacctttga tatttgcttt
    62281 atcagaagtg gcactggcat atattgtttg ggtgccagca ctattgagta cagtgccaac
    62341 atcttttcca taaacatcca ttttgccgtt ggcattaata atcgtatcaa ctgcccggga
    62401 accagtgacg actgttaatg agccagcgtt ttccagcact acatttttag cttctgaatt
    62461 cctgatgtag aaagcatcac cataactgtt ggttccttcg ataagggttc cggaagttgt
    62521 ggaagcaatt aatgcgccgc cggattgttg ctcaacatgc ttagcctcac caccgtcctg
    62581 aacctccaga acgccaccat tattaagtct ggtggtatct gttttagcct ccttctggac
    62641 aatcagctta ccgccagcat caacggtagt atttttcgcc gaggttttag ccactaccgt
    62701 cagttcgccg gtattttcca gcacaacata attagcctcc cctccggtaa tagtgaagtg
    62761 agagagcttg ttgtatcctt caatatcagt ccctgcgccc gtgttggcaa ctaaagcact
    62821 gcccgtctcc tggttaaccc catgtgcaat accaccggta tagacaatca gcgagcctcc
    62881 ggcgctaata ttgctgccag ttgccgtacc atctttctca acaacctgcc ggctcccgga
    62941 ggatataatt gtcgtgtcag ctttcccgcc gctcttgata ttttgcgttc cgccgttgat
    63001 attggtaccc gtggcaatac catgattatt aatattctgt gtaccaccat tgattatggt
    63061 attggtcgcg tttccggtaa catccattac cccgccgtta tctattcggg tcgcatcagc
    63121 tttagcattc gttaaaactg acattgttcc tttatcttta ataatcgtct tgtttgccga
    63181 accatatgcg tttatgtcta aatgaccacc gttttccagc aacacattgt ctgccacgtg
    63241 attgtggatg gagaatgcac cttcactatt cgtaccgctc accgtcgtac cgttagtgtt
    63301 tgtttttaaa attgcaccat cgtgctgggt aacatttgtt gccgtaccac cactaacatc
    63361 aagcacgcca ccggaataaa cttcaataac atccgaggag ctggtgtaat caacaatttg
    63421 cgtaccacca gaatagatct gagtattttt tgccgttgac ttattattca gagactgagt
    63481 tccaccttca atcgtcgtgt ccagcgcatg gctttcatat actctttgct caccgccatt
    63541 tttaatggtg gttgttccta ctgtgctctg ttcaacatac tgtcgtccac catttatgat
    63601 tgtgttcgtt gcaatacttc cttgcgtgat gtcctgataa ccggacttat ttatcgttgt
    63661 accatcaaca tgcccctgag ttgttacttt ctgccctcca ccatcaatga tggttccatt
    63721 cgcagtcccc ccacttatgt gtgaattacc acccttaatt gtcgttccat tgctgatacc
    63781 acctgtataa acgtcctgat tgccactgtc gattatcgta ccggtggaaa tgcccccgtc
    63841 atgaattgtc tgtcttcctc cgttaatggt tgtattatta gcctgcccca caaaattgtt
    63901 atgacttcct acatcttgat atccacccga ttcaataaga cttccattag ataccccgcc
    63961 atgaacattc tgctggccat ggttgataat atgagtgtta tttgttgtac ctcgttcatc
    64021 tactctttgg ctgccatcta cagtctcatc gtttaccaca ccaataacat caggagtgaa
    64081 ggccgtcatc ccaggcgggg catatatcaa ggcagatatc aataaggaaa gtactgagcg
    64141 gcgacaataa tggggactgg tcctgttcat aaatttcatc ctctgaaaag tgaatactga
    64201 gtagcgttta agcgacctta gctctgctgc aacatcagcc cacaggcacc agaccagggg
    64261 attcatcctg aagagacagc gcaagtgtat tgtgttcacc gctcatcaaa gacatcatga
    64321 tgaaatgatg atattccaca taagaaagaa gcatttttta aacgcagtgc gctgaagtat
    64381 ggttggataa aaaagtcaat ctattcaggg aatacggggg tattcttttc tttcgacaat
    64441 caggccgtcg gcaaaataaa atgatttaca taatcgtttc tgatgaatat cttctgctca
    64501 cataaaaata acacaataac tttgagatcg cagattcttt tacttttaca gcattcgtcc
    64561 ccccattgtt gggcaaatat agattgggcc agagcacgaa agttaatacc acgtttgcac
    64621 agctcctcca acagcacgac aagatgccac atactgcgcc ccagtcggtt cggtttacag
    64681 actacccgtg cgtccaccgc cgataatgtc ctgagcagtt ttttcagtcc ggacctcctg
    64741 ccacggtttt acgttgaaga ggtaaccctg agcacgcagt tcatcagtca ggcgtggtgt
    64801 accgtaaccc tattattgat gggtaagatc aaaaaaactt tcaggcagct aaggaaagtt
    64861 gaaccagaca ttagaataaa tatttcaacc aattacagca ccaattcaga caccgccagc
    64921 tcaacaaata aatcaagggg ttacgtgaaa gcgtagcccc tttttctttg atagtggcag
    64981 caaaatggtt gtagtgtaaa aaataatccc gtt
//
LOCUS       DAPGWB010000007        64299 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.007, whole genome shotgun sequence.
ACCESSION   DAPGWB010000007 DAPGWB010000000
VERSION     DAPGWB010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 64299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 64299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..64299
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.007"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..570
                     /locus_tag="RHX79_000444"
     CDS             <1..570
                     /locus_tag="RHX79_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HDV2195658.1"
                     /translation="FNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIK
                     GYSNHEKDVLEAVTLARSQANRASSDLQQTPGNEQKLQAWQQAQAQVTRTLGQLTIIS
                     ERYPELKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDY
                     TPKKNYLPDDVAAVSKAPTIDFSQNASAH"
     gene            584..1489
                     /locus_tag="RHX79_000445"
     CDS             584..1489
                     /locus_tag="RHX79_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001479509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgcG family protein"
                     /protein_id="HDV2195659.1"
                     /translation="MKNLILLLVLICSSAFAVQVPVPEFAKYINDLTGTLTREEVSTL
                     TSQIKTLTQKSHAQLIVLVVETTGDETIEQYATRVFERWQPGHKNLDDGILLVVAWQD
                     HTVHIEIGYGLEGILTDAQSGQIIRNSIIPAFKKGDLAVGLQQGIGDIETRLSENDLV
                     NNTSPDHPLPFSGWWALLVWAIVLTFISARGYVKTLGVICFAAIILAFVLPIAGYSGS
                     WGVLATLLCFATPFLVVAIAFTPFGRKVRDSMRSANRPSRYERSNSASRHSSSSSSSS
                     SSSFNNDNFSGGGGSSGGGGASGRW"
     gene            1525..1887
                     /locus_tag="RHX79_000446"
     CDS             1525..1887
                     /locus_tag="RHX79_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195660.1"
                     /translation="MSKILANHPRLSKFVFGLFGAAGMIWLNKAFQGDELFQLITSLL
                     ALDTFVYFCIYSLINPIPEANDFLWDYKVHQRKYSSNISHNDFVSNVRNSRKIVRILI
                     LVGITFINVIALLTKLKM"
     gene            complement(1943..3241)
                     /gene="eno"
                     /locus_tag="RHX79_000447"
     CDS             complement(1943..3241)
                     /gene="eno"
                     /locus_tag="RHX79_000447"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDV2195661.1"
                     /translation="MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
                     SREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTEN
                     KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
                     DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGS
                     NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
                     LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
                     IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
                     KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
     gene            complement(3329..4966)
                     /gene="pyrG"
                     /locus_tag="RHX79_000448"
     CDS             complement(3329..4966)
                     /gene="pyrG"
                     /locus_tag="RHX79_000448"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HDV2195662.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
                     INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
                     ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
                     AVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
                     NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
                     EQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVE
                     TRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARH
                     VANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD
                     DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPW
                     FVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK"
     gene            complement(5194..5985)
                     /gene="mazG"
                     /locus_tag="RHX79_000449"
     CDS             complement(5194..5985)
                     /gene="mazG"
                     /locus_tag="RHX79_000449"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HDV2195663.1"
                     /translation="MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVL
                     DAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFAD
                     SSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWT
                     TLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQK
                     ANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL"
     gene            complement(6056..6391)
                     /gene="mazF"
                     /locus_tag="RHX79_000450"
     CDS             complement(6056..6391)
                     /gene="mazF"
                     /locus_tag="RHX79_000450"
                     /EC_number="3.1.27.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease MazF"
                     /protein_id="HDV2195664.1"
                     /translation="MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTG
                     MCLCVPYTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLI
                     KAKINVLIG"
     gene            complement(6391..6639)
                     /gene="mazE"
                     /locus_tag="RHX79_000451"
     CDS             complement(6391..6639)
                     /gene="mazE"
                     /locus_tag="RHX79_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin MazE"
                     /protein_id="HDV2195665.1"
                     /translation="MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLII
                     EPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW"
     gene            complement(6717..8951)
                     /gene="relA"
                     /locus_tag="RHX79_000452"
     CDS             complement(6717..8951)
                     /gene="relA"
                     /locus_tag="RHX79_000452"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP diphosphokinase"
                     /protein_id="HDV2195666.1"
                     /translation="MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWVYCLQ
                     QTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
                     VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
                     REVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLL
                     HERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDV
                     RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
                     EIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGE
                     MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
                     FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
                     RQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNK
                     PSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
                     ITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRD
                     ITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
                     LHGS"
     gene            complement(8999..10300)
                     /gene="rlmD"
                     /locus_tag="RHX79_000453"
     CDS             complement(8999..10300)
                     /gene="rlmD"
                     /locus_tag="RHX79_000453"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HDV2195667.1"
                     /translation="MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGL
                     LPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQR
                     SKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVK
                     QCPILVPKLEALLPKVRACLGSLQVMRHLGHVELVQATSGTLMILRHTAPLSSADREK
                     LERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA
                     RALEWLDVQPEDRVLDLFCGMGNFTLPLAKQAASVVGVEGVPALVEKGQQNARLNGLQ
                     NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPA
                     TLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK"
     gene            10357..13113
                     /gene="barA"
                     /locus_tag="RHX79_000454"
     CDS             10357..13113
                     /gene="barA"
                     /locus_tag="RHX79_000454"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase BarA"
                     /protein_id="HDV2195668.1"
                     /translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
                     GASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFH
                     LDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYI
                     ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
                     GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
                     VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTI
                     ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTL
                     NIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
                     DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
                     GSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYS
                     PTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKL
                     KQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKL
                     IGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQ
                     QTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPE
                     VNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGL
                     VDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREAS
                     KILG"
     gene            complement(13345..14685)
                     /gene="gudD"
                     /locus_tag="RHX79_000455"
     CDS             complement(13345..14685)
                     /gene="gudD"
                     /locus_tag="RHX79_000455"
                     /EC_number="4.2.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HDV2195669.1"
                     /translation="MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIK
                     DNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQ
                     TFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGDRKTT
                     PLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAE
                     SIVALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMA
                     EFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGL
                     TWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQV
                     PEKPGLGVEIDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR"
     gene            complement(14706..16046)
                     /locus_tag="RHX79_000456"
     CDS             complement(14706..16046)
                     /locus_tag="RHX79_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HDV2195670.1"
                     /translation="MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
                     NAGHTGIGEAPGGEVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGA
                     WTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQRETITVLGYLFYIGDRTKTD
                     LPYVENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
                     VRALKKRFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAE
                     FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLT
                     WGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTQNPLEIKNGKIAVP
                     DAPGLGVELDWEQVQKAHEAYKRLPVGARNDAGPMQYLIPGWTFDRKRPVFGRH"
     gene            complement(16048..17400)
                     /gene="gudP"
                     /locus_tag="RHX79_000457"
     CDS             complement(16048..17400)
                     /gene="gudP"
                     /locus_tag="RHX79_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactarate/glucarate/glycerate transporter
                     GudP"
                     /protein_id="HDV2195671.1"
                     /translation="MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGS
                     EMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQ
                     GFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQY
                     FATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQKELEYI
                     AAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFP
                     VYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGM
                     LLSMVMVFCNYVNVEWMVIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMF
                     GNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIELKPVAGQ
                     "
     gene            complement(17835..18284)
                     /locus_tag="RHX79_000458"
     CDS             complement(17835..18284)
                     /locus_tag="RHX79_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HDV2195672.1"
                     /translation="MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDW
                     LPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCN
                     GGKQFDALLQEQSAQRVGEILLIDASENPEPETESNPWVEQWGTLLS"
     gene            complement(18302..19084)
                     /gene="truC"
                     /locus_tag="RHX79_000459"
     CDS             complement(18302..19084)
                     /gene="truC"
                     /locus_tag="RHX79_000459"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HDV2195673.1"
                     /translation="MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIG
                     QHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDY
                     PLVEELDKIADKFAREDKGSQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGR
                     KHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLT
                     IHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS"
     gene            complement(19084..19413)
                     /locus_tag="RHX79_000460"
     CDS             complement(19084..19413)
                     /locus_tag="RHX79_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HDV2195674.1"
                     /translation="MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDT
                     MEPLEWLQWVLIPRMHDLLNNNQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDA
                     LFADDAS"
     gene            complement(20035..20580)
                     /gene="syd"
                     /locus_tag="RHX79_000461"
     CDS             complement(20035..20580)
                     /gene="syd"
                     /locus_tag="RHX79_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SecY-interacting protein"
                     /protein_id="HDV2195675.1"
                     /translation="MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIIST
                     TEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQ
                     TWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGT
                     RKRTHLASNLAEFLNQLKPLL"
     gene            20648..21496
                     /gene="queF"
                     /locus_tag="RHX79_000462"
     CDS             20648..21496
                     /gene="queF"
                     /locus_tag="RHX79_000462"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDV2195676.1"
                     /translation="MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGL
                     KADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQ
                     TRFNNWDEVRQTLERDLSTCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNY
                     EFTTDYLENATSGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRY
                     LVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPST
                     TRLVRQ"
     gene            21608..22972
                     /gene="ppnN"
                     /locus_tag="RHX79_000463"
                     /gene_synonym="ygdH"
     CDS             21608..22972
                     /gene="ppnN"
                     /locus_tag="RHX79_000463"
                     /gene_synonym="ygdH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide 5'-monophosphate nucleosidase"
                     /protein_id="HDV2195677.1"
                     /translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS
                     GSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLR
                     DILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN
                     ENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS
                     IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA
                     NKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMP
                     LVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAF
                     SGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCY
                     EICT"
     gene            23529..24818
                     /gene="sdaC"
                     /locus_tag="RHX79_000464"
     CDS             23529..24818
                     /gene="sdaC"
                     /locus_tag="RHX79_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease SdaC"
                     /protein_id="HDV2195678.1"
                     /translation="METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN
                     AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT
                     LLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQM
                     IVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVM
                     VFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPA
                     DLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIK
                     SLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY
                     AIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS"
     gene            24876..26243
                     /gene="sdaB"
                     /locus_tag="RHX79_000465"
     CDS             24876..26243
                     /gene="sdaB"
                     /locus_tag="RHX79_000465"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase II"
                     /protein_id="HDV2195679.1"
                     /translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTR
                     VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQ
                     HEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQ
                     NSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRG
                     GIERGISTEGVLPGKLRVPRRASALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC
                     IERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK
                     IVACD"
     gene            26355..27110
                     /gene="xni"
                     /locus_tag="RHX79_000466"
     CDS             26355..27110
                     /gene="xni"
                     /locus_tag="RHX79_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417278.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease Xni"
                     /protein_id="HDV2195680.1"
                     /translation="MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTH
                     AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNE
                     ADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV
                     QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL
                     ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR"
     gene            complement(27165..28313)
                     /gene="fucO"
                     /locus_tag="RHX79_000467"
     CDS             complement(27165..28313)
                     /gene="fucO"
                     /locus_tag="RHX79_000467"
                     /EC_number="1.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417279.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
                     /protein_id="HDV2195681.1"
                     /translation="MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQC
                     GVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDT
                     CKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRR
                     KFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHI
                     KAIEIIAGALRGSVAGDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPH
                     GVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARNAAVEAVFALNRDVG
                     IPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELYHTAW"
     gene            complement(28341..28988)
                     /gene="fucA"
                     /locus_tag="RHX79_000468"
     CDS             complement(28341..28988)
                     /gene="fucA"
                     /locus_tag="RHX79_000468"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HDV2195682.1"
                     /translation="MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTG
                     IPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVS
                     ILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVAQALKNRKATLLQHHGLIAC
                     EVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE"
     gene            29535..30851
                     /gene="fucP"
                     /locus_tag="RHX79_000469"
     CDS             29535..30851
                     /gene="fucP"
                     /locus_tag="RHX79_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HDV2195683.1"
                     /translation="MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNL
                     NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA
                     LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQT
                     FNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAI
                     VLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTA
                     CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALI
                     AMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTII
                     GGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQTATN"
     gene            30884..32659
                     /gene="fucI"
                     /locus_tag="RHX79_000470"
     CDS             30884..32659
                     /gene="fucI"
                     /locus_tag="RHX79_000470"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HDV2195684.1"
                     /translation="MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEK
                     LRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPT
                     RPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL
                     RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRID
                     QKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQG
                     NSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVV
                     ATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLIN
                     SGSAALDGSCKQRDSEGNPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRF
                     LTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRL
                     TGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSA
                     WAAHGMDIEGQDYRACQNYGPLYKR"
     gene            32768..34186
                     /gene="fucK"
                     /locus_tag="RHX79_000471"
     CDS             32768..34186
                     /gene="fucK"
                     /locus_tag="RHX79_000471"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417283.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HDV2195685.1"
                     /translation="MKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENN
                     TWHQWSLDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISW
                     KCPRTAAVMNNIERLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERAHAWLFI
                     SSLINHRLTGEFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIG
                     TLQNSAAAMLGLPVGIPVISAGHDTQFALFGAGADQNEPVLSSGTWEILMVRSAQVDT
                     SLLSQYAGSTCELDSQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAP
                     GADGVKMQCDLLSCQNAGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKA
                     SELLLVGGGSRNTLWNQIKANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEAR
                     AQIHYQYRYFYPQTEPEFIEEV"
     gene            34188..34610
                     /gene="fucU"
                     /locus_tag="RHX79_000472"
     CDS             34188..34610
                     /gene="fucU"
                     /locus_tag="RHX79_000472"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HDV2195686.1"
                     /translation="MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR
                     ADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDI
                     IRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP"
     gene            34668..35399
                     /gene="fucR"
                     /locus_tag="RHX79_000473"
     CDS             34668..35399
                     /gene="fucR"
                     /locus_tag="RHX79_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose operon activator"
                     /protein_id="HDV2195687.1"
                     /translation="MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQT
                     QGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDAS
                     STCWYLARQLPDINIQVFTNSHPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQ
                     LKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEA
                     RIGHLDEVTHIISDERQVATSLVTA"
     gene            complement(35443..36543)
                     /gene="rlmM"
                     /locus_tag="RHX79_000474"
     CDS             complement(35443..36543)
                     /gene="rlmM"
                     /locus_tag="RHX79_000474"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010435097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HDV2195688.1"
                     /translation="MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIY
                     ECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE
                     LRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYT
                     GYSYSNNNSPFYMGIPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDL
                     GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC
                     DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA
                     QIQARQLYHDREEVTVHVRRIWAAVGGRRDER"
     gene            complement(36536..36931)
                     /locus_tag="RHX79_000475"
     CDS             complement(36536..36931)
                     /locus_tag="RHX79_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HDV2195689.1"
                     /translation="MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGL
                     EYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVT
                     PVGGVSFLAGWALMLVGAIRLKRKGVSHE"
     gene            complement(36950..37867)
                     /gene="gcvA"
                     /locus_tag="RHX79_000476"
     CDS             complement(36950..37867)
                     /gene="gcvA"
                     /locus_tag="RHX79_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     regulator GcvA"
                     /protein_id="HDV2195690.1"
                     /translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL
                     EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLP
                     SFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL
                     YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGP
                     IFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA
                     ELGKIAAFRQWILAKAAAEQEKFRFRYEQ"
     gene            complement(38218..38445)
                     /locus_tag="RHX79_000477"
     CDS             complement(38218..38445)
                     /locus_tag="RHX79_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417289.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HDV2195691.1"
                     /translation="MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTD
                     NDTGMISYKDANGNKQQINRTDVKEMVELDQ"
     gene            38637..39842
                     /gene="csdA"
                     /locus_tag="RHX79_000478"
     CDS             38637..39842
                     /gene="csdA"
                     /locus_tag="RHX79_000478"
                     /EC_number="3.13.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase CsdA"
                     /protein_id="HDV2195692.1"
                     /translation="MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYS
                     LSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYA
                     RPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPR
                     SRILALGQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAF
                     SGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMIHEVSFDGFTTQSAPWKLEAGTPNV
                     AGVIGLSAALEWLADYDINQAESWSRSLATLAEDALAKRPGFRSFRCQDSSLLAFDFA
                     GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAV
                     DRALELLVD"
     gene            39842..40285
                     /gene="csdE"
                     /locus_tag="RHX79_000479"
     CDS             39842..40285
                     /gene="csdE"
                     /locus_tag="RHX79_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase sulfur acceptor subunit
                     CsdE"
                     /protein_id="HDV2195693.1"
                     /translation="MTNPQFAGHPFGTTVTAETLRNTFAPLSQWEDKYRQLIMLGKQL
                     PALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGK
                     TAAELQAQSPLALFDELGLRGQLSASRSQGLNALSEAIIAATKQV"
     gene            complement(40336..41142)
                     /gene="tcdA"
                     /locus_tag="RHX79_000480"
     CDS             complement(40336..41142)
                     /gene="tcdA"
                     /locus_tag="RHX79_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDV2195694.1"
                     /translation="MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSW
                     AAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAKVMAERIRQINPECRV
                     TVVDDFVTPDNVAQYMSAGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQID
                     PTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGT
                     VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG"
     gene            complement(41381..42478)
                     /gene="mltA"
                     /locus_tag="RHX79_000481"
     CDS             complement(41381..42478)
                     /gene="mltA"
                     /locus_tag="RHX79_000481"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HDV2195695.1"
                     /translation="MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLV
                     NQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGI
                     DAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGA
                     LSDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDR
                     GEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRA
                     SVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIG
                     PEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG"
     gene            42687..42763
                     /locus_tag="RHX79_000482"
     tRNA            42687..42763
                     /locus_tag="RHX79_000482"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:42721..42723,aa:Met,seq:cat)
     gene            complement(42838..44091)
                     /gene="amiC"
                     /locus_tag="RHX79_000483"
     CDS             complement(42838..44091)
                     /gene="amiC"
                     /locus_tag="RHX79_000483"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiC"
                     /protein_id="HDV2195696.1"
                     /translation="MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPA
                     SSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSAR
                     VGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLED
                     YNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQI
                     ARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSG
                     SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLK
                     FGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQ
                     QEVAESILAGIKAYFADGATLARRG"
     gene            44323..45654
                     /gene="argA"
                     /locus_tag="RHX79_000484"
     CDS             44323..45654
                     /gene="argA"
                     /locus_tag="RHX79_000484"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HDV2195697.1"
                     /translation="MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSS
                     IVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAG
                     TLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDA
                     IHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDD
                     GDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGAL
                     LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI
                     DKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERITAQAKQS
                     GLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG"
     gene            complement(45716..47542)
                     /gene="recD"
                     /locus_tag="RHX79_000485"
     CDS             complement(45716..47542)
                     /gene="recD"
                     /locus_tag="RHX79_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HDV2195698.1"
                     /translation="MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSH
                     DAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMIL
                     CGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAV
                     ALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK
                     ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDL
                     PMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERAGQLSRLTG
                     THVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTD
                     IEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG
                     VAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGT
                     RVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV
                     YTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE"
     gene            complement(47542..51084)
                     /gene="recB"
                     /locus_tag="RHX79_000486"
     CDS             complement(47542..51084)
                     /gene="recB"
                     /locus_tag="RHX79_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HDV2195699.1"
                     /translation="MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGL
                     GGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLE
                     EIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLR
                     YQACADFWRRHCYPLPREIALVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETL
                     ASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEE
                     TNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIEQLLAEPLSIRDLVITRALAE
                     IRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQ
                     QYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA
                     PGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGES
                     CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQ
                     VRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLN
                     ALDIETLNNDEHAWDVVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGER
                     RLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVT
                     IHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDLNAAPESVDLAEVERLAED
                     LRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTC
                     IEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDNWRVTSYSGLQQRGH
                     GIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNW
                     VQEKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSDRDKQVEMEFYLPISEP
                     LIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGE
                     DSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIYLFLRGV
                     DKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA"
     gene            complement(51077..53965)
                     /gene="ptrA"
                     /locus_tag="RHX79_000487"
     CDS             complement(51077..53965)
                     /gene="ptrA"
                     /locus_tag="RHX79_000487"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HDV2195700.1"
                     /translation="MPRSTWFKALLLFVALWAPLSQAETGWQPIQETIRKSDKDNRQY
                     QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYP
                     QADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAE
                     RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQAL
                     KDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKG
                     IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVE
                     GISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDEL
                     ANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMT
                     PQNARIWYISPKEPHNKTAYFVDAPYQVDKISEQTFADWQQKAANIALSLPELNPYIP
                     DDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFSSEPKADVSLILRNPKAMDSARNQ
                     VMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGY
                     FSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSI
                     TLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVD
                     KKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLG
                     YAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQ
                     AVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV
                     EPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE"
     gene            complement(54141..57509)
                     /gene="recC"
                     /locus_tag="RHX79_000488"
     CDS             complement(54141..57509)
                     /gene="recC"
                     /locus_tag="RHX79_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HDV2195701.1"
                     /translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ
                     WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL
                     LDREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGE
                     AQAWQAPLWKALVEYTHELGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA
                     LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL
                     FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL
                     LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR
                     LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV
                     LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD
                     DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS
                     LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL
                     GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND
                     GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS
                     ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE
                     RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN
                     FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE
                     IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL
                     SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG
                     MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDI
                     WYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS"
     gene            complement(57522..57845)
                     /locus_tag="RHX79_000489"
     CDS             complement(57522..57845)
                     /locus_tag="RHX79_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDV2195702.1"
                     /translation="MSASLKNQQGFSLPEVMVAMVLMVMIVTALSGIQRTLMNSLASR
                     NQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLH
                     CPNRQ"
     gene            complement(57830..58237)
                     /locus_tag="RHX79_000490"
     CDS             complement(57830..58237)
                     /locus_tag="RHX79_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2509 family protein"
                     /protein_id="HDV2195703.1"
                     /translation="MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQS
                     LRRQAIVQSALAWGKMHSWQTQPAVQCSQYAGTDARVCLRLLADNEALLVAGYEGVSL
                     WRTGEVIDGNIVFSPRGWSDFCPLKERALCQLP"
     gene            complement(58234..58797)
                     /locus_tag="RHX79_000491"
     CDS             complement(58234..58797)
                     /locus_tag="RHX79_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HDV2195704.1"
                     /translation="MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRK
                     LALEDEIWLRVFTVAKHLQRAGYCHGSCTGEGLEIVGQDDCIIVQWDANSNGIWDREP
                     VKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVL
                     TVNMRAASKSEPQTVVDASYSVTGFNL"
     gene            complement(58788..59258)
                     /locus_tag="RHX79_000492"
     CDS             complement(58788..59258)
                     /locus_tag="RHX79_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HDV2195705.1"
                     /translation="MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTAS
                     QARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEV
                     EMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL"
     gene            complement(59443..60237)
                     /gene="thyA"
                     /locus_tag="RHX79_000493"
     CDS             complement(59443..60237)
                     /gene="thyA"
                     /locus_tag="RHX79_000493"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDV2195706.1"
                     /translation="MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPL
                     VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP
                     TPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
                     CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHL
                     QLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI"
     gene            complement(60244..61119)
                     /gene="lgt"
                     /locus_tag="RHX79_000494"
     CDS             complement(60244..61119)
                     /gene="lgt"
                     /locus_tag="RHX79_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDV2195707.1"
                     /translation="MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRR
                     ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSF
                     HGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNF
                     PFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYI
                     RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVI
                     MMVWAYRRSPQQHVS"
     gene            complement(61270..63516)
                     /gene="ptsP"
                     /locus_tag="RHX79_000495"
     CDS             complement(61270..63516)
                     /gene="ptsP"
                     /locus_tag="RHX79_000495"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HDV2195708.1"
                     /translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD
                     HDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV
                     KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLT
                     ALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEE
                     AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVI
                     EKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATT
                     LAELPQDRLVGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGE
                     LLVDPEPVLLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
                     LGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQL
                     PYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVD
                     EARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQ
                     YILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILI
                     GLGYRHLSMNGRSVARVKYLLRRIDYAEAENLAQRSLEAQLATEVRHQVAAFMERRGM
                     GGLIRGGL"
     gene            complement(63529..64059)
                     /gene="rppH"
                     /locus_tag="RHX79_000496"
     CDS             complement(63529..64059)
                     /gene="rppH"
                     /locus_tag="RHX79_000496"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001655775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDV2195709.1"
                     /translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE
                     SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL
                     QLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE
                     NTPKPQNASAYRRKRG"
BASE COUNT        15637 a        17291 c        15706 g        15665 t
ORIGIN      
        1 ttcaatttat caggctgtgg atataacgat attcaaacct atgatgagca ggttaacgcc
       61 tcctggtctg aggtattaaa tcaatatcaa cgtcgcgccg atcttattcc taatcttgtc
      121 gccagtatta aaggttattc caaccatgaa aaagacgttt tggaagccgt aacattggct
      181 cgtagccagg ctaatcgcgc cagcagcgat cttcagcaaa ctccgggaaa tgaacaaaaa
      241 ttacaagcct ggcaacaggc tcaagcgcag gtgactcgca ctctcggtca gttaacgata
      301 attagtgagc gttaccctga gttaaaggct caagagctct atcaaaactt aatggtacag
      361 ctcgaaggaa gtgaaaatcg aattgccgtt gcgcgaggaa gatatattaa agccattgaa
      421 caatataatg ttactatccg caaattcccc gctgtattaa ccgcaaaggt catggattac
      481 acaccgaaga aaaattattt gccggatgat gtcgccgctg tgagtaaagc accaacaata
      541 gattttagcc agaatgctag tgctcattag gcgagttaat tatatgaaaa atttaatctt
      601 acttcttgtt ctgatctgtt catctgcgtt tgcagtgcaa gttccagtac ctgaattcgc
      661 taagtatata aatgatttaa cagggacatt aaccagggag gaagtaagta cgctgaccag
      721 tcagattaaa accctgacgc aaaaaagcca cgcacaactg atcgtgttag tagtagaaac
      781 aacaggcgat gaaaccatcg agcaatatgc aacacgagta ttcgagcgtt ggcagcccgg
      841 tcataagaat cttgatgacg gtattttact ggtagttgcc tggcaagatc atacagtaca
      901 tattgaaatt ggctacggac ttgagggtat tctgacggat gcgcagtccg ggcaaattat
      961 acgcaacagt attattcctg cgtttaaaaa gggcgatctt gctgtcggct tgcaacaagg
     1021 tattggtgat attgaaaccc gattatcaga aaatgattta gtcaataata catcgcccga
     1081 tcatccttta ccctttagcg gttggtgggc tctgttagtc tgggcgatag tactgacgtt
     1141 tatttctgcc agaggatatg tcaaaacgct gggagtgatt tgctttgctg ccataatact
     1201 ggcctttgta cttcccatcg ctggatatag cgggagctgg ggagttcttg ccacattatt
     1261 atgtttcgcc actccattcc tggtcgtagc tatcgctttc acgcctttcg gcagaaaggt
     1321 gcgtgattca atgcgtagcg ccaaccgacc gtcacgttac gaaagaagca actcggcctc
     1381 ccgacattct tcatcatcgt catcttcctc ttcatcctct ttcaacaatg acaatttcag
     1441 cggtggtggc ggttcatccg gcggtggcgg cgcgtcagga agatggtaag acttaaaaac
     1501 agattacagg gaaggtaagg aaatatgagt aagattttag cgaatcatcc acgattaagt
     1561 aaatttgtat ttggcttatt cggtgctgct ggaatgattt ggcttaataa agccttccag
     1621 ggcgatgaat tatttcaact gataacatca ctgcttgctt tagatacgtt tgtgtacttt
     1681 tgcatctaca gtctgattaa cccaatacct gaggcaaatg attttctttg ggattataaa
     1741 gtccatcaac gaaaatattc atccaatatt tctcataatg attttgtcag caatgtaagg
     1801 aatagcagaa aaattgttcg gatacttatc ctggtgggaa taacatttat taatgttatc
     1861 gctctgctta ctaaactcaa aatgtgaaga taaaaaaacc cgcttcaaga agcgggtttt
     1921 ttattaagac gttaagtcag tcttatgcct ggcctttgat ctctttacga ccgttgtacg
     1981 gtgctttttc gcccagagct tcttcgatac gaatcagctg gttgtattta gcaacacggt
     2041 cagaacggct catagaacca gttttgatct ggcctgcagc agtaccaaca gccaggtcag
     2101 cgatggtagc gtcttcagtt tcgccagaac ggtgagagat aactgcagtg tagccagcat
     2161 ctttcgccat cttgattgca gccagagttt cggtcagaga accgatctgg ttgaatttga
     2221 tcaggatgga gttagcgata cctttttcga taccttcttt caggatcttg gtgttggtta
     2281 cgaacaggtc gtcaccaacc agctggattt tgtcgcccag aactttggtc tggtatgcga
     2341 aaccgtccca gtcagattcg tccagaccgt cttcgataga aacgatcggg tactgtttgg
     2401 tcagttcttc caggaagtga gtgaattctt cagaggtgaa cgctttgttg ccttcgccag
     2461 ccagaacgta tttaccatct ttgtagaatt cagaagctgc gcagtccatc gccagagtga
     2521 tgtctttgcc cagttcataa ccagcagctt taacagcttc agcgataaca gccagagctt
     2581 cagcgttgga acccaggttc ggcgcatagc caccttcgtc accaacagca gtgttcatgc
     2641 ctttcgcttt cagaactttt gccaggtgat ggaaaacttc agaacccatg cggatggctt
     2701 ctttcacagt tttcgcgcca accggctgaa tcatgaattc ctggatatca acgttgttgt
     2761 cagcgtgctc accaccgttg atgatgttca tcatcggaac cggcatagag tatttgcccg
     2821 gagtaccgtt cagttcagcg atgtgctcgt acagcggcat acctttagca gctgcagcag
     2881 ctttggcgtt agccagagat acagccagga ttgcgttcgc gccgaatttg gatttgtttt
     2941 cggtgccgtc caggtcgatc atgatcttgt caatgccagc ctgatcttta gcatctttgc
     3001 caatcagcgc ctgagcgatc gggccgttta ccgcagcaac agctttggtt acgcctttac
     3061 ccaggaaacg ggatttgtcg ccatcgcgca gttccagagc ttcacgggaa ccagtagaag
     3121 cacctgacgg agcagctgcc ataccgacga aaccaccctc cagatgtact tcggcttcaa
     3181 cagtcgggtt accacgggag tcgatgattt cacgaccgat gatttttacg attttggaca
     3241 ttaggttttc ctcaagtcac tagttaaact gaaactccag acaaacaacg cgtacccagg
     3301 gtacgcgttg ccgttctaac ttttttactt acttcgcctg acgcttctgg aactcgctgg
     3361 cggcttttac aaagccagca aacagcgggt gaccatcacg tggagtagaa gtaaactccg
     3421 gatggaactg gcaagccacg aaccacgggt gattcggaac ttcgatgatc tcgaccaact
     3481 gatcatcccc ggaacggccc gcaacgcgca gacctgcatc ttcaatctgt ttcaacagca
     3541 tgttgttgac ttcgtaacgg tgacgatgac gctcaacaat tgtcggcgca ttgtacagct
     3601 ggcgaaccag gctatcgtca accaactggc actgctgtgc gccgagacgc atggtaccgc
     3661 cgagatcgct cttctcgcta cgaacttcaa cgttgccgtt ttcatcgcgc cactcggtaa
     3721 tcagcgccac aaccgggtac ttacagtctg gcacaaattc cgtagagttg gcgttctcca
     3781 tgttggcaac atggcgagcg taatcaatta acgccacctg catacccagg caaatgccca
     3841 gataaggaat attgttctca cgcgcaaaac gcgcggtcgt aatcatgcct tctacgccac
     3901 gatagccgaa accgccaggt acgaggattg cgtccagacc tttaaggatt tcaacgccgc
     3961 gcgtttcaac atcttgtgaa tcgatcagtt tgatgttgac gctgacacga ttcttcagcc
     4021 caccgtgttt cagtgcttcg atcactgatt tataagcatc cggcagttca atgtacttgc
     4081 cgaccatacc gatggtgact tcacttaccg ggttcgcttc ttcgaagata acctgttccc
     4141 attcggacag attcgcttcc gggcagttta agctgaatcg tttacaaata taatcgtcca
     4201 gcccctgaga tttcaacagg cccggaattt tatagatgga atcgacgtct ttcagagaaa
     4261 taaccgcttt ttccggaaca ttacagaaca atgcaatctt cgcacgttcg ttcgccggaa
     4321 cagcgcgatc tgaacgacaa atcaggatgt caggctggat accgatggag agcagctctt
     4381 ttacagagtg ctgagtcggt ttggttttga cttcaccaga cgctgccatg tacggcacca
     4441 gcgtcaggtg cataaacaga gtgtgctcac ggccaatttc aacagccatc tggcgaatcg
     4501 cttcgaggaa cggcaaggat tcgatatcac ctactgtacc gccgatttct accagtacta
     4561 cgtcatgacc ttcgccacct tccagcacgc gctctttgat tgcgttagtg atgtgcggaa
     4621 taacctgcac ggttgcgccg aggtagtcac cgcggcgttc tttacgcaga acgtcagagt
     4681 agatacgacc cgtggtgaag ttgttgcggc ggctcatttt ggtacgaatg aaacgctcgt
     4741 agtgccccag gtccaggtcg gtttcagcgc cgtcttcagt aacgaacact tccccgtgtt
     4801 ggattgggct catagtacct ggatcgacgt tgatgtaagg atccagtttc atgatggtca
     4861 cattgaggcc acgggcttca agaatggctg cgagggaggc tgcggcaatg cctttaccca
     4921 gagaggatac gaccccgccg gtcacaaaaa tatagttcgt tgtcatgctg aacctgagaa
     4981 gttaggttga aaagacgatg gaataaccag gacgggaaag cagtataccc gaacatgacc
     5041 tgtgccacaa actttcatta tccctcctct tcgccagcgc actattgaaa tcaggagtga
     5101 gaaaatagcc cctttggggt aaatgttttt gacgcaaatc aagcgcttgt catttaaaaa
     5161 atgacacaaa tggcgcttga ccgcgtaatt cccttagaga tcaatttcct gccgttttac
     5221 ctgttgccag acttcttcca ttgtttcgag gtcaacacct gtcatttcca gtccacgcgc
     5281 ggcaacaata cgctccactt cgcgaaaacg acgctcaaat ttttcgttcg ctttttgcaa
     5341 tgcgatttcc gcttttgtcc ctaaatgacg agccagattg accgtggcaa acagcaggtc
     5401 ccccatttcc tcctccagtt tagcctggtc gacaacagcc tgccgcgctt cgtacatcac
     5461 ctcgtcgatc tcttcgtaga ctttatcgac taccggacca agcgtcgtcc aatcgaagcc
     5521 aacgttggcg caacgtttct ggattttttg cgcacgcatt aaagccggta aactacgagg
     5581 aatatcgtcc agcgccgaat gctgcgcttt ctgcgcgcgc tcttcggttt tgatttgctc
     5641 ccaacgggca agcacttcac tactgttttc ggcagaacta tcagcaaaaa catgcggatg
     5701 gcgacgctct aatttatcgc taatagcagc gcaaatatca ttaaagtcaa agcgcccttc
     5761 ttcctgagcc atttgcgcgt aaaacaccac ctggaatagc agatcgccca gttcaccgcg
     5821 aagatcgtca aaatcttcac gggcgatggc gtccagcact tcgtaggttt cttcaagggt
     5881 gtaaggcgca atggtggcaa atgtctgctc tttatcccac gggcagccgt tttccggatc
     5941 gcgcaggcgc tgcataatag tgagcaaacg gtcgatttga ttcattgaat tgtcctgaaa
     6001 attgcgggtc tgtcaggtgg aaacctgtga ccagaataga agtgagttag taacactacc
     6061 caatcagtac gttaattttg gctttaatga gttgtaattc ctctggggca actgttcctt
     6121 tcttcgttgc tcctcttgcc cgccaggcga tactttttac ctgatcagct aacgctacgc
     6181 catcacgttc ctgaccggat aaaacaactt cgaacggata tccttttgat tgcgttgtat
     6241 aaggaacaca cagacacata cctgttttgt tgttgtacat gaaaggactc aggacaacag
     6301 ctggacgatg tccagcttgc tcgctacctt ttgtcgggtc aaaatcaacc caaatcagat
     6361 cgcccatatc gggtacgtat cggcttacca ttaccagact tccttatctt tcggctctcc
     6421 ccagtcgata ttctcgtgga ggttttccgg cgtgatgtcg ttgaccagtt cagcaagcgt
     6481 aaatacgggc tctttacgca ctggctcaat aattaatttg ccatccacca ggtcaatctt
     6541 cacttcatca tcaatattca gattgagcgc ctgcattaac gtagccggga tccgcaccgc
     6601 cggtgaattt ccccaacgct ttacgctact gtggatcata accctttcct caaaccgcta
     6661 tcatatgtag atacagtata tatcaatcta cattgtagat acgagcaaat ttcggcctaa
     6721 ctcccgtgca accgacgcgc gtcgataaca tccggcacct ggttgagttt acccagcacg
     6781 cgccccagca cttgcaggtt gtaaatctca atggtcatgt cgatggtcgc cagttgctgt
     6841 ttggtgtcgc tacggctggc aacgccaagc acgttcacct tctcgttggc gagaatggtc
     6901 gtgatatcac gtaacaaccc actacgatca ttagccacca cgcggaccac cagcgaatat
     6961 ccggcggagt agctctcacc ccataccgcg tcaacaatgc gttctggcgc atgggagcgc
     7021 agttccgcca gttgttcgca atcggcgcgg tgtactgaaa taccgcgccc ctgggtaatg
     7081 aagccgacaa tctcatctcc aggaatcggc tggcagcagc gcgcgatgtg gtgcatcagg
     7141 ttgccaacac cttcgaccac cacgcgaccg ttatctttac tgcggttttg cggcgtgtag
     7201 cttttttgct gaagttgctt cagcgcggcg gcgtcctgct cttcggcact cggcttatta
     7261 aattgcgatt gcaggaagtt caccatctga ttgagacgga tatccccgcc accaatcgcc
     7321 gccagcaact cgtcgacatc attaaagttg taacgcggca gcagatgttt ttctgcttct
     7381 ttcaggctga tccccagatg ttccagctcg tcgtcaagga tttgccgccc agccagaatg
     7441 tttttgtcac ggtcctgttt acggaaccag gcgtgaattt tcgaacgccc acggctggtt
     7501 gtgacgtaac cgaggtttgg gtttaaccag tcacggctgg ggttcggctg tttctgggtg
     7561 ataatttcaa tctggtcgcc catctgcagc tggtaggtga acggcacaat gcgcccgcca
     7621 atttttgccc cgatgcagcg gtgtccgaca tcactgtgga tgtggtaagc gaagtccagc
     7681 ggcgttgatc ccgcaggcaa atcaacgaca tcacctttcg gcgtaaagac atacacccgg
     7741 tcgtcaaaga cctggctgcg tacttcgtcg agcatttcgc cggaatcagc catctcttcc
     7801 tgccacgcaa tcagtttacg cagccaggca atccggtctt catgtcccga acgtgcgccg
     7861 ccagctgccg cgccctcttt atatttccag tgcgcagcaa cacccaactc tgcatcttca
     7921 tgcatctgtt tggtgcggat ttggatctca acggttttgc cacctggccc cagaaccacg
     7981 gtatgaatag actgataacc gtttggtttc gggttagcga cataatcgtc aaactcatcc
     8041 ggcaggtggc gatagtgagt gtgcactatc cccagtgcgg cataacaatc ctgtaaacgc
     8101 tcggcgacaa tacgtaccgc acgcacatca aacagctcat cgaaggcgag gttctttttc
     8161 tgcattttgc gccagatact gtagatgtgt ttcggacgac catacacttc agctttaacg
     8221 ccttcagctt tcatctcagc gcgcagatgg ccgacaaact cttcgatata gtgttcgcgg
     8281 tcgagacggc gttcatgcag cagttttgcg atgcgtttgt attcggtcgg gtggagataa
     8341 cggaagcagt aatcttccag ctcccatttc agttgcccaa tcccaagacg gttcgccaac
     8401 ggcgcgtaga tattggtgca ctcttttgcc gccagtacgc gttcatcttc cggcgcatct
     8461 tttacttcgc gcagatgagc aatacgctcc gccagtttga tgaccacgca gcgaaaatca
     8521 tcgaccatcg ccaataacat ccggcgaacg ttatcgacct gttcggagga aacagaatca
     8581 gtgtgcgtcg ctttcagctg gcggatcgcc gccatatcac gcacgccgtg aataaggtta
     8641 acgaccgact taccgacgct ctcacgcagc acatcttcgc tgactacgtt ggcatcagcc
     8701 agagggaaca gcagcgccgc ccgcagcgtg tcaatgtcca tacttaatgt cgagaggatc
     8761 tccaccatct caacaccacg ccacaataac agactggcat ccggatgccc ctgcgtctgt
     8821 tgcagacaat acacccaggt ttcggctaag cactcacacg acttctggct ggtaataccc
     8881 agacttgcga tccatttttc cggatcaaat tcaccagcct tattgatatg tgcacttctt
     8941 accgcaacca ttgtcctctc ctttagggac cagacctgcc gaaatcggca aatcgtaact
     9001 atttaacgcg cgagaaaagt accatcgatt ccagatgtcc cgtgtgtggg aacatatcca
     9061 gcatcgccag tcgcgcaatg gtatatcctg cttttaataa cgcttcgcta tcccgagcca
     9121 gcgttgcagg gttacaggat acataaacta tacgaatagg ttccagtttt ataatttgct
     9181 gcataacacc tgcggcacct gctcgcgccg ggtccagcaa cactttatcg aagccgtttt
     9241 tcgcccacgg ctgctttgtg acatcttctt caagattttc gtgataaaac gtcacattct
     9301 gtaaaccatt aagacgcgca ttctgctggc ctttttccac cagcgccgga acaccttcta
     9361 caccgaccac actggctgct tgtttcgcca atggcagtgt aaagttgccc ataccgcaga
     9421 acagatccag tacgcgatct tcaggttgca catccagcca ttccaacgca cgcgctacca
     9481 ttttttggtt cacacccgca ttgacctgaa taaaatcgcg cgggctaaaa gttaagcgca
     9541 acccgtttga gtcataccag ggcatctcac cagagacggt ttcgagtatc tcactatcgg
     9601 gggcgagata cagatccagg ccttcagaat gcgaaaagcg ttccagtttt tcgcgatctg
     9661 ccgaacttag cggtgcggta tggcgcaaaa tcatcagcgt gccgctggtt gcctgtacca
     9721 gttcaacatg accaagatgg cgcataactt gtaagctgcc caggcatgcc ctgactttgg
     9781 gcagcaatgc ttcaagtttg ggcactaaaa tggggcattg tttaacgtcg acaatgtcac
     9841 tggagcccgc tttgcgaaag cccatctgaa gttgctgtgt tttcggtaag tagttcaaac
     9901 ttaaacgcgc gcgacggcga tagccccagg gaacatcggc gatcacttca gagacttcgt
     9961 gtttcattaa tcgggcgagt gccgcacttt tgcttcgctg ctgtaaatcc acgctggcgt
    10021 gttgttgctg acagccaccg catacgccaa aatgagggca gcgtggcgtt tcgcgttccg
    10081 ggctatcgct taaccggcgc acgactttag cgcgggcgta ctgtttttta tcttcagtaa
    10141 cagtaacttc cgcgttttcc tgtggcagta atccaggaat aaataacgct ttgccgttat
    10201 gtcgcgccac gccctgacca aaagagtcga ggtcgttgac tgaaacggtt atgatctgac
    10261 gcgtcgtcgt gcgtcgtttt gcagagtaga attgcgccat tggcgagact ttctcaattt
    10321 aacagtgtga ccttaattgt cccataacgg aactccatga ccaactacag cctgcgcgca
    10381 cgcatgatga ttctgatcct ggcaccgacc gtccttattg gtttattgct gagtatcttt
    10441 ttcgtcgtgc atcgctataa cgacttgcag cgtcaactgg aagatgccgg tgccagcatt
    10501 attgagccgc ttgcagtttc tactgaatat ggcatgagcc tgcaaaatcg cgaatctatc
    10561 ggtcagttaa taagcgtact gcatcgtcgc cattccgata ttgttcgcgc gatttcggtt
    10621 tatgatgaaa ataaccgact ctttgtcacc tccaattttc atcttgatcc ctcatcaatg
    10681 cagctcggca gcaacgtgcc gtttcctcgc cagctcactg tcactcgtga cggcgatatt
    10741 atgatcctcc gcacgccgat tatttctgag agttactccc ccgacgaatc gcccagtagc
    10801 gatgccaaaa atagtcaaaa tatgttggga tatattgcgc ttgagctgga tcttaaatcg
    10861 gttcgcttgc agcaatataa agagatcttt atttccagcg tgatgatgct gttttgtatc
    10921 ggtattgcgc ttatttttgg ctggcgctta atgcgcgatg taaccggtcc gattcgcaac
    10981 atggtgaata ccgtcgaccg catccgtcgc gggcaactcg acagccgggt ggaaggattt
    11041 atgctcggcg agctggatat gctgaaaaac ggtatcaact cgatggcaat gtcgctggct
    11101 gcttatcacg aagagatgca gcacaatatc gaccaggcga cgtccgatct gcgtgaaacg
    11161 ctggagcaga tggaaattca gaacgttgag ttggatctgg cgaaaaagcg cgcccaggaa
    11221 gcggcgcgta ttaaatccga gtttctggca aatatgtcac acgagctgcg tacaccactg
    11281 aatggtgtta ttggctttac ccgcctgacg ctgaaaacag aattaacacc aacgcagcgc
    11341 gatcacctga atacgattga acgttcggca aataatttgc tggcaattat taatgatgtt
    11401 ctcgacttct cgaaactgga agcaggtaag ctgattctgg aaagtattcc attcccacta
    11461 cgcagcacgc tggatgaagt cgttactctg ctggcacatt cttctcacga taaagggttg
    11521 gaactgacgc tcaatattaa aagcgacgtg cctgataacg tgatcggcga cccgctgcga
    11581 ttacagcaaa tcatcactaa cctggtgggg aatgcaatta aattcaccga gaatggcaac
    11641 attgatattc tggtagaaaa acgtgcgctg agtaatacca aagtgcagat tgaagtgcag
    11701 attcgggata ccggcattgg tattcctgaa cgcgatcaat cgcgcttatt ccaggccttc
    11761 cgacaggctg atgccagtat ttcccgccgt catggtggca ccgggctggg gctggtgatt
    11821 acacaaaaac tggttaatga aatgggcggc gatatttcgt tccatagcca gccgaatcgc
    11881 ggttcaactt tctggttcca cattaatctc gatctgaacc cgaacattat tatcgaaggg
    11941 ccatccaccc agtgcctcgc aggtaagcgc ctggcctatg tcgaaccaaa ctccgcagca
    12001 gcgcaatgca cgctggatat tttaagtgaa acgccgctgg aagtggttta tagcccaacg
    12061 ttctccgcgc tgcctcccgc gcattacgac atgatgttgt taggcatcgc ggtgaccttc
    12121 cgcgagccgc taacaatgca acatgagcga ttagcgaaag cggtatcgat gaccgatttc
    12181 ctgatgctgg cacttccttg ccatgcacaa gtcaatgctg aaaaactcaa gcaagatggt
    12241 atcggcgcgt gtctgctgaa accattaaca cctacacgcc tgttgcctgc cctgacggaa
    12301 ttttgtcatc acaaacaaaa cacgcttttg cctgtaaccg atgaaagtaa gctggcaatg
    12361 acagtcatgg cggttgatga caaccccgct aacctgaaac ttatcggcgc attgctggaa
    12421 gatatggtgc aacatgtgga actttgcgat agcgggcatc aggcggttga acgggcgaaa
    12481 cagatgccgt tcgatttgat cttaatggat attcaaatgc ctgacatgga tggcattcgg
    12541 gcctgcgagc tcatccacca gctcccccat cagcaacaaa cgccggttat cgcggtaacg
    12601 gcgcatgcaa tggccgggca aaaagagaag ctgcttggcg cagggatgag cgattatctg
    12661 gcgaaaccga ttgaagaaga gcgattgcat aatttgttgt tgcgctacaa gcctggcagc
    12721 ggtatttcct ctcgcgtcgt gacgcccgaa gtcaacgaaa ttgtggtgaa cccgaatgcg
    12781 accctcgact ggcaactggc actacgccag gcagcaggaa aaaccgattt agcgcgcgat
    12841 atgctgcaaa tgttactcga tttcctgcct gaagttcgca acaaagttga ggaacagctg
    12901 gttggagaaa acccggaagg cctggttgat ttgattcata aactgcatgg cagttgcggc
    12961 tatagcggtg tgccgcgtat gaagaatctc tgccaactga tcgaacaaca gctacgtagc
    13021 ggtactaaag aagaagattt ggagccggag ctgctggaac tgttggacga gatggataat
    13081 gtagcgcgcg aagccagcaa aattctcggg taacggacgt cttgtcgagt agcaatcggc
    13141 tttttatgac gctggtttca gattggtgac aaagtgcctg tgtttatgcc ggatgcggcg
    13201 ttaacgcctt atccggccta caaaaccaat taaattcaat gaattaaaaa atgatgtaga
    13261 cctgatacat agcacaacag gctattttgc gtttagcatc agtctcaagc cggctccaga
    13321 tagagccggt tttggttttc tgtcttaacg caccatgcac gggcgcttgt tatcgaacgt
    13381 ccagccagga atcagatact gcattcccat cgcatcgtca cgcgcgccaa gcccgtgttt
    13441 ctgatacagc tcatgggctt tcatcacttg atccatatcg atttctacac ccagccccgg
    13501 tttttctggc acctgtacca gcccgccttt gatctcaaac ggttctttgg tcaggcgctg
    13561 attaccttcc tgccagatcc agtgcgtatc aatagcagta attttacccg gtgcagcggc
    13621 ggcaacatgg gtaaacatcg ccagggaaat atcgaagtgg ttgtttgagt gtgaacccca
    13681 ggtcaggcca aattcatggc acatttgcgc cacacgtacc gaaccttgca tcgtccagaa
    13741 atgcggatcc gccagcggga tatcaacgga ttgcagggag agcgtatggc ccatctgccg
    13801 ccagtcggtg gcgatcatat tggttgcggt cggcaggcca gttgcgcgac ggaactctgc
    13861 catcacttca cgcccggaga aaccttgctc cgcaccacac ggatcttctg cataagccag
    13921 cgaccctttc aggtatttac caattttaat cgcttcgttc agcgaccagg caccgttagg
    13981 atcgagcgta atacgcgcct gcgggaagcg ttgcgccagt gccacaatag actcggcctc
    14041 ttcttccccg gccagtacac cgcctttcag tttgaaatcg ttgaagccat atttttcata
    14101 cgccgcttcc gccaggcgca ccaccgcatc cggcgtcatc gcttcttcat gacgcaggcg
    14161 ataccagtcg catgagtcat ccggctggct ttgatacggc agcggtgtgg ttttgcgatc
    14221 accgacgaag aacagataac cgagcatttc gacttcgcta cgctgttgac catcgcccag
    14281 cagggatgcc acgtttaccc ccagatgctg ccccagcaga tccagcattg ccgcttctat
    14341 cccggtaact acatgaatag tggtacgcaa atcaaatgtc tgcaaaccgc gcccaccagc
    14401 atcacgatcg gcaaaagtat tacgcaccag cgtcagaacg tttttgtatt cacccagcgt
    14461 tttacctacc accagcggaa tcgcatcttc cagcgtttta cggattttct cgccgccggg
    14521 aatttcccct acgccagtgt gaccagaatt atctttgata atcacaatat tacgcgtaaa
    14581 gaacggtgcg tgtgcaccac tcagattcat cagcatactg tcatgacccg ccaccgggat
    14641 gacctgcatt tcagtaacaa caggcgtcgt aaattgagaa ctcatattta tgtccttttt
    14701 cagaatcaat gacggccgaa aacgggacgt ttacggtcaa aggtccagcc ggggatcagg
    14761 tactgcatcg gacctgcgtc gttacgcgca ccgacaggca gacgtttata ggcctcatgt
    14821 gccttttgta cctgttccca gtccagttcc acgcccagac cgggcgcatc aggaacggca
    14881 atttttccgt ttttaatctc cagcggattt tgggtcaggc gacaatcgcc ctcctgccaa
    14941 atccagtggg tatcgatagc ggtaggatta cccggtgccg ccgcgcccac atgggtaaac
    15001 atcgccagag agatatcgaa atggttatta gaatggcagc cccaggtcag cccccagtcg
    15061 tcgcaaagct gcgccacacg gactgcaccg gaaagcgtcc agaagtgcgg atcggcaagt
    15121 ggaatatcta ccgcattgag catcaccgca tgacccattt cgcgccagtt ggtggcgatc
    15181 atgttagtcg cgacgggcaa gccggtcgcc cgccgaaact ccgccataac ttcacgaccg
    15241 gagaaaccct gttctgcgcc gcatggatct tcggcatagg taagaacatc attcagccct
    15301 ttgcatagag aaatggcttc atcaagtagc caggcaccgt tgggatcaac ggtaatccgc
    15361 gcatcaggga agcgtttctt caatgcacga acagtgtcga tttcttgctc gccaggtaac
    15421 accccgccct taagtttgaa atctttaaag ccatagcgat cctgtgaggc ttccgccaga
    15481 cgcacaacgg cttcgctgtt catcgctttc tgatggcgca actgatacca ctcatggttg
    15541 cccggcgtat tttccacata aggaagatcg gttttggtcc gatcaccgat ataaaacaga
    15601 taaccgagga cggtaatagt ctcgcgttgc ttgcctggcc ccaacagttc gcagaccgga
    15661 acattcagcg ccttacctag caggtcaagc aaggcggctt ccagcgccgc cacggcatta
    15721 acgcgcaatt caaaagtcca ggcacctttg ccgaaggtat caaaatcggc tgcctgatta
    15781 cctttatgca cctgctgaac cactttattc aggcgcgcaa cttcctggcc cagaaccatc
    15841 ggaatagcat cgaccagtgt ttgataaatc acctctccgc ccggcgcttc accaatgccg
    15901 gtatgcccgg cgttatcggt gagtaccaca atattgcggg tgaaatatgc gttatgtgcc
    15961 ccaccaatat taagcaacat gctatcgtgc ccggcgaccg gaatgacttt catatcagta
    16021 ataacaggac tggattgtgt cgtcatctta ttgccccgcg acaggtttca gctcgatacg
    16081 cttgatatcg cccaccagca ccaggtagct cagtaccgcg attaaggcat gaacaccaac
    16141 ataaatcagc gccccattaa aggagccagt cgtgccaacg atataaccaa ttgcgattgg
    16201 cgtgacgatg ccagaaatgt taccgaacat gttgaacagg ccaccggaaa gaccgctgat
    16261 ctcttttggc gcggtatctg ccattactgc ccaacccagc gccccgatgc ccttaccgaa
    16321 gaaggccagc gccataaagc cgatgaccat ccactcaacg ttgacgtagt tgcagaacac
    16381 catcaccatc gacagcaaca tgcccattac gatcggtgtt ttacgcgcaa tgttcagcga
    16441 tcccgtgcgg cgcatcagcc agtcggaaat aatcccaccc agcacaccgc cgataaaacc
    16501 gcaaaccgcc ggaacggaag ccacaaagcc cgctttcaga atcgacatcc cacgcgcctg
    16561 caccagataa accggaaacc aggtaatgaa aaagtaagtc agggcgttga tacagtactg
    16621 accgatataa acgccgatca tcatccgtga cccgagcagt tgtttgatct gcccccactt
    16681 cacgctgaac ggcactttaa ctttggtgtt ttgctgatcc atattgatca gcgcgccacc
    16741 cgcggcgata tactccagct ctttctgatt tacccccgga tgttgatttg gctcgtggat
    16801 gactttcaac cagataaagc tgatgacaat ccccagaccg cccataaaga agaagacgtg
    16861 tgaccagccc acttcatgcg tcagccagcc cataatcggc gcgaagatca ccgttgcgaa
    16921 gtattgagcg gagttaaaaa tcgacaccgc cgttcccctt tcctgcgccg gaaaccaggc
    16981 cgcaacaatg cgactgttgc cggggaaaga tggcgcttca gcaagcccga ctaggaagcg
    17041 cagagtaaac agggcaacga taatgccgaa tccactaaag atatcgacga agccttgcag
    17101 caaggtaaac atcgaccaga taaagatcga ccagaagtag acgcgttttg aaccaaaacg
    17161 gtccagcaac cagccaccag ggatctgccc gataacataa gcccatgaga aggcagagaa
    17221 cacatagccc attcccacgg gatcaaggcc gatatctttg gccatttccg aaccggcaat
    17281 agaaagcgta gcgcggtcgc cgtagttgaa ggatgtgacg ataaacaaca tcaccactat
    17341 ccagtaacga gcattcgtgc gtttttccac actgctcgca gcctgactta aagaactcat
    17401 tgttgcactc ctgaaaattc gcgttagcca cgctcactct ggactgcgac atcgccagga
    17461 aatcagaggt gacgtagggt gttttttgcc gtttttatag gtcgttcgcc gaatacggcg
    17521 cgtgtttata tctggcaata gcagtataaa aagcgcgcca tagcggctca ccgtgcaaca
    17581 acacaacatt aatgcgttca atgaggcccg attttggcat tagccctgga cggtggaatc
    17641 cacttcacgg aaatgaaaac aagaacaaga aaggaagggt aaaaacgaag aaataaagaa
    17701 gagtatgaaa tggatcgctt gactccaggc aaacgccagt aaaaatccgc gctatgaagc
    17761 agtttttact ggcatttgcc tgaaaagatt cgattcagca ccgctaaaac gacatttacc
    17821 gctcgctgaa catatcagga caacagcgtg ccccactgtt cgacccacgg atttgattcc
    17881 gtttccggtt ccgggttctc actggcgtca atcaacagta tttcgccaac ccgctgagcg
    17941 ctctgttcct gcaacaaggc atcgaactgt ttgccgccat tgcagaaatt tacataactg
    18001 ctgtcgccga gcgcaatcac gccataacgc agattcggct ggaagcccag actatctttg
    18061 attccctgaa agagcggcac aatgctatca ggaaggtcgc cctgcccggt cgtggacgta
    18121 accaccagaa catacttatc ctgataaggc agccagtcgc ttaattcagg atcttcaaat
    18181 accgttgctt tgtggccctg tgcggtcaga attgcttctg cttcttccgc cactaacagc
    18241 gaatttccgt acatggtgcc gacaaaaata ccaatttccg ccataccgtt ttctccctgg
    18301 attaggaact tatctctcca tcctgacccg atggcgcact gaactcaacc ctttcatttt
    18361 caggaagcag accgcgccag ccaaattgtg ataacgcctg catccaggtg tcgtccaggc
    18421 ccgcgtgaat agtcagcggc tcgccagtaa aaggatgcgt caatgacaac tgactggcat
    18481 gtagcattaa ccgctggagg ccaaaatgct cagcaccgct gcgattctgg cgtaaatcgc
    18541 catgtttgct atcgccaata atcggatgac gcaaatgggc aagatgtcgg cgaagctgat
    18601 gtttgcgtcc ggttttcggc tccagttcca ccaggccgta gcgcgtggtc gggtaacgtc
    18661 cggtcgctac cggcatttct acggtcgcca gaccgcgata atgcgtcact gctggctgcg
    18721 agcctttatc ttcgcgggca aatttatcag cgattttgtc cagttcttcc accagtggat
    18781 aatccagaac tgcttcttcc atcaaccagc cgcgcacaat cgcatggtaa cgtttctgga
    18841 tttggtgctg ttcaaactgt tgtgccagca gccgtccggc ctcgctggat aatcccatca
    18901 acaacacacc agaagtgggt cggtccagac gatgagcggt aaaaacgtgc tggccaatct
    18961 gatcacgcac ggtttgcatg accactactt tctcgtcgcg atccagccag ctgcggtgaa
    19021 ccagccagcc ggagggttta tttaccgcaa ccagccattc atcctgatag agtatttcca
    19081 gcattagctc gcatcatccg caaaaagagc atccagtttt tccaactcag ccagaataag
    19141 cgcgcgttgc ggatggtccg tcgccagcgc catttcataa tagggtgcaa cagcaaaagc
    19201 acccggtaac ggctggttgt tatttaacaa atcgtgcatt cgcgggatca gcacccactg
    19261 caaccactcc agtggttcca tggtgtccat aaagaacggt tgggtactat taaattgatg
    19321 cggctggggt tcatcgtttc gccagtgctg atgttcacgc agtaacgctt caagcgcctg
    19381 caactggaga cgaacgcggt catgagtggt cataaagcaa cctcaataag aaaaactgcc
    19441 gcgaaggata gcaggaataa aaaaagggag cactgtattc acagcgctcc cggttcgttt
    19501 cgcagcattc cagctacttt tgttgctccc tgctcatcct tgacaacttt tcctctggcc
    19561 ttgcggccaa tcgttcatcc tgaactattg cttcctgctc acaccacccc gatgtgatac
    19621 ttcatcctga agtgtccctg gccttcctga cccaccgaat catcctgacc ggttctcatt
    19681 ctccatcctg gaggtgtcct ttaacgcgtc ctgcgtcatc ctcttcgctt catccagaag
    19741 cctttccctg aaacaccatc ctggtgtgtc ctgcagaagt gtcatcatcc tgatgttcac
    19801 ttcgttgtct gactccctgt cgacgaagat agaatcgtct ttttcgcgaa gtcttacaag
    19861 gcgcttacag acaatgcctt aaggaaaatt tcatatgaaa gttaagaatt aacaatcaac
    19921 attttgattt taaatgaaaa taacgattct tatcttttta agtattcgct tatttcctgg
    19981 cgatctccta cagagtctgt aagagatctc tcacaaccag atggggtatt tggattacag
    20041 aagaggctta agttgattaa ggaattccgc aagatttgag gctaaatgcg tccgtttacg
    20101 tgttcccagc gtctctttgc acacttcacc ggagagatta cacaccgaga tgacctctaa
    20161 ctcttcttcc agcgtcgcga taaatagcgt gggcggcagt tttagccttt tctgagtcac
    20221 cagatgacca atcagatttt cctgcacccg acggaagtcg tcttcactcc aggtttgcag
    20281 caatgtcagt ttgatatcgc caaactgcgc gtgcatatcc ccggcaaact gagtcgtata
    20341 aaaggtatga attgtgggtt gtatcacaat atcaaaagcg cgttcaaccg cgtttacatt
    20401 ttgttccccg gtaaacggct ggggttgcca gtatacggca tcttcggtag ttgaaataat
    20461 gcacggtgaa ggaacaccgt acagttcctc acttaacggc cagcttttat gctcttcatg
    20521 ccacgcatcg cagtagcgtg cagtaaaatc tttcagggct tgtgcggtca aatcgtccac
    20581 taatttctct cttcacttaa accagataca cttgtcgttt agtttatctg gtttatgacg
    20641 gtgaaacatg tcttcttatg caaaccatca ggcacttgcg ggcctgactc ttggaaaatc
    20701 aaccgattac cgggatacct atgacgccag cctactgcaa ggcgttccac gcagcctgaa
    20761 tcgcgacccg ctgggtctga aagcggataa cctgcctttt cacggtacgg atatctggac
    20821 gctgtatgaa ctttcctggc tgaatgcgaa aggtttgccg caggtcgctg tcggtcatgt
    20881 tgaacttgat tacaccagcg taaatctgat tgagtcgaag agttttaagc tctatctcaa
    20941 cagttttaac cagacgcgtt ttaataactg ggatgaggtg cgccagacgc tggagcgcga
    21001 cttaagcact tgcgcccagg gtaaggttag cgtggcgtta tatcgtcttg atgaactgga
    21061 aggccagccg ataggtcatt tcaatggcac ctgcattgat gaccaggata tcactatcga
    21121 taactatgaa ttcactactg actatctgga gaatgccacc agcggtgaaa aagtagtgga
    21181 agagacgctt gtcagccacc tgctgaaatc aaactgcctg atcacccatc aaccagattg
    21241 gggttcgatc caaattcagt atcgtggacg ccaaattgac agagaaaaac tgctgcgtta
    21301 cctggtctca ttccgtcatc acaacgagtt ccacgaacag tgcgtggaac gcatctttaa
    21361 tgacctgtta cgcttctgcc agccagagaa attaagcgtt tacgcacgtt atacccgtcg
    21421 tggcggtctg gacattaacc cgtggcgcag taatagcgat tttgtcccat cgaccacaag
    21481 actggttcgg caataaattt tttctcaatt ttgcgtgctg gattcacgca gaaggttgtg
    21541 aaaggtcatc aggcagggct attgtaatca aagggaatga cgatattcgt cccataagga
    21601 gtttttcttg attacacata ttagcccgct tggctccatg gatatgttgt cgcagctgga
    21661 agtggatatg cttaaacgca ccgccagcag cgacctctat caactgtttc gcaactgttc
    21721 acttgccgta ctgaactccg gtagtttgac cgataacagc aaagaattgc tgtctcgttt
    21781 tgaaaatttc gatattaacg tcctgcgccg tgaacgcggc gtaaagctgg aactgattaa
    21841 tcccccggaa gaggcttttg tcgatgggcg aattattcgc gctttgcagg ccaacttgtt
    21901 cgcggttctg cgagacattc tcttcgttta cgggcaaatc cataataccg ttcgttttcc
    21961 caacctgaat ctcgacaact ccgtccacat cactaacctg gtcttttcca tcttgcgtaa
    22021 cgctcgcgcg ctgcatgtgg gtgaagcgcc aaatatggtg gtctgctggg gcggtcactc
    22081 aattaacgaa aacgagtatt tgtatgcccg tcgcgtcgga aaccagctgg gcctgcgtga
    22141 gctgaatatc tgcaccggct gtggtccggg agcgatggaa gcgccgatga aaggtgctgc
    22201 ggtcggacac gcgcagcagc gttacaaaga cagtcgtttt attggtatga cagagccgtc
    22261 gattatcgcc gctgaaccgc ctaacccgct ggtcaacgaa ttgatcatca tgccagatat
    22321 cgaaaaacgt ctggaagcgt ttgtccgtat cgctcacggt atcattatct tccctggcgg
    22381 tgtgggtacg gcagaagagt tgctgtattt gctgggaatt ttaatgaacc cggccaacaa
    22441 agatcaggtt ttaccattga tcctcaccgg cccgaaagag agcgccgact acttccgcgt
    22501 actggacgag tttgtcgtac atacgctggg tgaaaacgcg cgccgccatt accgcatcat
    22561 cattgatgac gccgctgaag tcgctcgtca gatgaaaaaa tcgatgccgc tggtgaaaga
    22621 aaatcgccgt gatacaggcg atgcctacag ctttaactgg tcaatgcgca ttgcgccaga
    22681 tttgcaaatg ccgtttgagc cgtctcacga gaatatggct aatctgaagc tttacccgga
    22741 tcaacctgtt gaagtgctgg ctgccgacct gcgccgtgcg ttctccggta ttgtggcggg
    22801 taacgtaaaa gaagtcggta ttcgcgccat tgaagagttt ggtccttaca aaatcaacgg
    22861 cgataaagag attatgcgtc gtatggacga cctgctacag ggttttgttg cccagcatcg
    22921 tatgaagttg ccaggctcag cctacatccc ttgctacgaa atctgcacgt aatctcccct
    22981 cccccggtga cgtttgttgc cgggttttct cgtttttggt cacttactca tcaactcatt
    23041 tcatttgtta tatgaatgtt tcttaccacc ctcacgcgac aaatatcatc acagttaata
    23101 tgtcatacaa tttatattgc aacgcaaacg tttccctatt ttcataaacc gtattttatc
    23161 gctatgaaaa agaaattatc gccatgatta actaaaagta ttgatttttt cagttcaacc
    23221 tacatatatt gcgcgccccg gaagaagtca gatgtcgttt aatgggcaaa tattgccctt
    23281 aaattctctt ttacttttga tttacagagt aaagcgttgg gataatctat cttccaagta
    23341 gattattgta tttgagatca agatcactga tagatacata acttgtgtgt atctttccgc
    23401 cctcaaatta ttacggcggt aaatgattaa gccatcgccg atagacagat ttcattttta
    23461 cggtcaggca ccttcccggg ctgaactggc taaaagctga attatttgca ttcctccagg
    23521 agaaatagat ggaaacgact caaaccagca cgattgcgtc gaaagactct cgtagtgcct
    23581 ggcgcaagac agacaccatg tggatgctgg gcctttacgg cacggcaatc ggcgcgggcg
    23641 tgctgttcct gccaatcaac gccggtgttg gcggtatgat cccgctgatc atcatggcta
    23701 tccttgcgtt cccgatgacg ttttttgctc accgcggcct gactcgcttc gtactgtctg
    23761 gtaaaaaccc gggcgaagac atcaccgagg ttgtagaaga acactttggt attggcgcag
    23821 gtaaactgat taccctgctc tacttcttcg ctatctaccc gatcctgctg gtttatagcg
    23881 tggcaatcac caataccgtt gaaagcttca tgtctcacca gctgggtatg acgccaccgc
    23941 cgcgtgcgat tctgtcgctg atcctgatcg tgggtatgat gaccatcgtt cgcttcggtg
    24001 agcagatgat cgttaaagcg atgagtattc tggtattccc gtttgttggc gtactgatgc
    24061 tgctggctct gtacctcatc ccgcagtgga acggcgcagc actggaaacg ctgtctctgg
    24121 acactgcatc tgcaaccgga aacggtctgt ggatgaccct gtggctggca attccggtaa
    24181 tggtgttctc gttcaaccac tctccgatca tctcttcttt cgccgttgcg aagcgtgaag
    24241 agtacggcga tatggcagaa cagaaatgct cgaagatcct tgcattcgca cacatcatga
    24301 tggtgctgac cgtaatgttc ttcgtcttca gctgcgtact gagcctgact ccggcagacc
    24361 tggctgcggc taaagagcag aacatctcga ttctgtctta cctggctaac cactttaacg
    24421 caccggttat cgcgtggatg gctccgatta tcgcgattat cgctatcacc aaatccttcc
    24481 tcggccacta cctgggcgca cgtgaaggct tcaacggtat ggtgattaaa tctctgcgtg
    24541 gtaaaggtaa gtctatcgaa atcaacaagc tgaaccgtat cactgcgctg ttcatgctgg
    24601 taacgacctg gattgttgcc accctgaacc cgagcatcct gggtatgatt gaaaccctgg
    24661 gcggcccaat catcgcgatg atcctgttcc tgatgccgat gtacgcaatt cagaaagtac
    24721 cggcaatgcg taagtacagc ggtcacatca gcaacgtatt cgttgtcgtg atgggtctga
    24781 ttgcaatctc cgcaatcttc tactctctgt tcagctaagt cctttcgcgc cgctttcggg
    24841 cggcgcttcc tccgttttaa cgcgatgtat ttcctatgat tagcgtattc gatattttca
    24901 aaatcggcat tggcccttcc agttctcata ccgttggacc aatgaaagcg ggtaaacaat
    24961 ttaccgacga tctgattgcc cgtaatctgc ttaaagacgt gacccgcgtg gtggttgacg
    25021 tgtacggctc gctctctctg accggtaaag gccaccacac tgatatcgcc attattatgg
    25081 gcctggcggg taacctgccg gataccgtgg atatcgattc catccctggt tttattcagg
    25141 atgtgaatac tcatggtcgc ctgatgctgg caaacggtca gcatgaagtg gagttcccgg
    25201 ttgatcagtg catgaacttc catgcagaca acctttctct gcatgaaaac ggtatgcgca
    25261 ttaccgcgct ggcgggcgat aaagtcgttt acagccagac ttactactct attggcggtg
    25321 gctttatcgt tgatgaagag cattttggcc agcagaatag cgcaccggtt gaagttcctt
    25381 atccgtacag ttcagcagcc gatctgcaaa aacattgtca ggaaaccggg ctgtcactct
    25441 ctggcctgat gatgaaaaat gagctggcgc tgcacagcaa agaagagctg gaacagcacc
    25501 tggcgaacgt atgggaagtc atgcgtggcg gtattgagcg cggtatttcc accgaaggcg
    25561 tgttgcctgg caaactgcgc gttccacgcc gtgcttcggc actacgccgg atgctggtca
    25621 gccaggataa aaccaccact gacccgatgg cggttgttga ctggatcaac atgtttgcat
    25681 tggcagtgaa cgaagagaac gctgctggcg gacgcgtggt gactgcgccg actaacggtg
    25741 cgtgcgggat tatcccggca gtgctggcgt actacgacaa gtttatccgc gaagtgaacg
    25801 ctaactcact ggctcgttac ctgctggtag ccagtgccat tggttctctt tataagatga
    25861 acgcgtcaat ttctggtgct gaagtcggct gccagggtga agttggtgtg gcgtgctcaa
    25921 tggcggcggc tggtctggca gaactgttag gtgcaagccc ggcgcaggtg tgcatcgcgg
    25981 cggaaatcgc catggagcac aacctcggtc tgacgtgtga cccggtcgcc ggacaggtcc
    26041 aggtgccatg catcgagcgt aacgccattg cggcagtaaa agcggtgaac gccgcacgta
    26101 tggcgctacg ccgtaccagc gagccgcgcg tctgcctcga taaagttatc gaaaccatgt
    26161 acgaaacagg taaagatatg aacgccaagt accgcgaaac ctctcgcggc ggcctggcaa
    26221 tgaagatcgt tgcctgcgat taatcgctct ccagaggcct cgttttgcga ggcctcttcc
    26281 cgatttctca tccagccgta gcctgttccg gcatcgaatg ttacccttat cgcctgatct
    26341 ttaagggggt tatcgtggct gttcatttgc ttattgtcga tgcactgaat cttattcgtc
    26401 gcattcatgc cgttcaggga tcgccctgtg tcgaaacctg ccagcatgcg ctcgatcagc
    26461 tcattatgca cagccagcca acccacgcgg tcgccgtttt tgatgatgaa aaccgcagta
    26521 gcggctggcg tcatcagcgt ttaccagatt acaaagcggg tcgaccgcca atgccggaag
    26581 agttgcacga cgagatgcct gcattacgcg ccgcctttga gcaacgcggc gtcccgtgct
    26641 ggtcaaccag cggcaacgaa gccgatgact tagccgccac gctggcggtc aaagtgacac
    26701 aggccgggca tcaggcaacg attgtttcga cagataaagg ctactgtcag ttactttcac
    26761 cgacattacg tattcgtgat tacttccaga aacgttggct ggatgcgcca tttatcgata
    26821 aagaatttgg cgttcaaccg cagcagttgc ccgattactg gggacttgcg gggatcagca
    26881 gttcaaaggt accgggtgtt gcgggaatcg gaccaaaaag cgccacgcag ctgctggtcg
    26941 agtttcagag tctggaagga atatatgaga atctggatgc ggttgccgaa aagtggcgca
    27001 aaaaattaga aacccataaa gagatggcgt ttctgtgccg cgatattgcc cgcttacaaa
    27061 ccgatttgca tatcgacggc aatttacagc aattgcggtt ggtacggtaa cggcgagccg
    27121 gatacgccgc aaacgtcgta tccggcatta tcacatcagc gcatttacca ggcggtatgg
    27181 taaagctcta caatatcctc aagcgttgct tcacgcgggt tgccaccggt acaaacatca
    27241 tccagtgccg cctgcgccag tgccggaatg tcttccttgc gtacaccaac atcacgcaaa
    27301 tgtggcggaa taccgacatc acggttgaga gcaaacaccg cttcaacagc ggcattacgc
    27361 gcctcttcca ggctcatacc ttccactttc acgcccataa cgcgcgcgat atcgcggtac
    27421 ttctcaccgg taaagtcagc gttatagcgc atgacatgcg gtaacaggat ggcgttcgca
    27481 acaccgtgtg gagtgttgta aaacgcgccc agtggatgcg ccataccatg caccaaccct
    27541 aacccaacat tcgagaagcc catacccgca acatactgcc cgagcgccat ttcttctccg
    27601 gcatccttat caccagcaac cgatcctcgc agcgccccag caatgatttc aatcgcttta
    27661 atgtgcagtg catcggttag cgcccacgcg ccacgggtaa tatacccctc aatagcatga
    27721 gtgagcgcat cgacacccgt cgcagctttc agcgctggag gcataccatc catcatgtca
    27781 gcgtcaataa acgccacctg cgggatatca tgcggatcaa cgcaaacaaa cttgcgccgt
    27841 ttctcttcgt cagtgatcac gtagttaatg gtcacttctg ccgcagtacc tgctgtggta
    27901 ggaattgcca gaatcggtac actgggttta ttggtcgggg aaagcccttc caggctacgc
    27961 acatcggcaa actccgggtt gttgctgata atgccaatcg ctttacaagt atcctgtgga
    28021 gaaccaccac caatagcgat caggtaatcc gcgccgctat tctggaatac accgagccct
    28081 tctttgacga cagtaattgt tgggttgggc actacgccgt cgtaaatcgc ccatgccagc
    28141 cctgcagcat ccatcttatc ggtcactttc gccaccacgc cgcattgcac cagcgtttta
    28201 tcggtgacga tcagcgcctt ctgataacca cggcgtttca cctcatcggt taaagcccca
    28261 acagcacccc gaccaaacca tgccgtttcg ttcagaatca ttctgttagc catcatcctt
    28321 ctccttgttg ctttacgaaa ttactcttca atccgtaacc cataggtttt gaatttctcc
    28381 agcactacgg caatctcttc atcgctcagc actggcaccg ggtccgtaat cgccagggtc
    28441 gtcaggtaaa gttgcgccag cacttcaact tcatgcgcca gccataacgc tttttccaga
    28501 ttcacctcac aagcgataag cccatgatgt tgtaacaaag ttgccttacg atttttgaga
    28561 gcctgcgcaa catgttcaga aagttcacgt gttccaaagg tcgcataagg cgcgcaagga
    28621 atagaattac cgccagccgc cgcaatcatg tagtgaatag cggggatcga tcggttaaga
    28681 atggaaactg ccgtgcaatg aacggcatga ttgtgaacaa ccgcgttggc atccggtctg
    28741 ctttgatagg ccgccatatg gaaacgccat tcgcttgagg ggagctttcc ttcctcatgt
    28801 ttaccgttgc catcaataaa gacaatatgc gactccgtca gtttttcata tggaatgcct
    28861 gtaggcgtaa tcagcatccc atcctgataa cgtacactga cgttccccgc tgtcccctgg
    28921 ttcagtccca ggcgggtcat ttccaggcaa gtgtcaataa tctgacgagc aagtttattt
    28981 cgttccatta gctacctctc tctgattcaa aacagggcaa taatgttgtt cctttcacac
    29041 tattgaatta gccgtttaat tacccaccat cttcttcctg attaaccaga aagaaattca
    29101 caagcttata ttttgtgacc tggttcaact aatcacagta aataactgca agttctcttt
    29161 ttataacccc attaaaaatg accgctctta aaaatattta tcaaaacggt catttttcta
    29221 ttcactcaag ccaggaatgc ccgttttcgg cataaacaat taatacggtc atctggtttg
    29281 tgttttttat gatttatttt ctgaaacggg catgaaattt cgattattaa agtgatggta
    29341 gtcacataaa gtcaccttcc agctaataag tgtgaccgcc gtcatattac agagcgtttt
    29401 ttatttgaaa atgaatccat gagttcattt cagacaggca aatattcact gatatgaagc
    29461 ccgaactcgc tggttttgca cttttgaaaa cataaccgat tacgtgctta agcttctgaa
    29521 cctaagagga tgctatggga aacacatcaa tacaaacgca gagttaccgt gcggtagata
    29581 aagatgcagg gcaaagcaga agttacatta ttccattcgc gctgctgtgc tcactgtttt
    29641 ttctttgggc ggtagccaat aaccttaacg acattttatt acctcaattc cagcaggctt
    29701 ttacgctgac aaatttccag gctggcctga tccaatcggc cttttacttt ggttatttca
    29761 ttatcccaat ccctgctggg atattgatga aaaaactcag ttataaagca gggattatta
    29821 ccggattatt tttatatgcc ttgggcgctg cattattctg gcccgctgca gaaataatga
    29881 actacacctt atttttagtt ggcctattta ttattgcagc cggattaggt tgtctggaaa
    29941 ctgccgcaaa cccttttgtt acggtattag ggccggaaag cagtggtcac ttccgcttaa
    30001 atcttgcgca aacatttaac tcgtttggcg caattatcgc ggttgtcttt gggcaaagtc
    30061 ttattttgtc taacgtgcca catcaatcgc aagacgttct cgataaaatg tctccagagc
    30121 aattgagtgc gtataaacac agcctggtat tatcggtaca gacaccttat atgatcatcg
    30181 tggctatcgt gttactggtc gccctgctga tcatgctgac gaaattcccg gcattgcaga
    30241 gtgataatca cagtgacgcc aaacaaggat cgttctccgc atcgctttct cgcctggcgc
    30301 gtattcgcca ctggcgctgg gcagtattag cgcaattctg ctacgttggc gcacaaacgg
    30361 cctgctggag ctatttgatt cgctacgctg tagaagaaat tccaggtatg actgcaggct
    30421 ttgccgctaa ctatttaacc ggaaccatgg tgtgcttctt tattggtcgt ttcaccggta
    30481 cctggctcat cagtcgcttc gcaccacaca aagtcctggc cgcctacgca ttaatcgcta
    30541 tggcactgtg cctgatctca gccttcgctg gcggtcatgt gggcttaata gccctgactt
    30601 tatgcagcgc ctttatgtcg attcagtacc caacaatctt ctcgctgggc attaagaatc
    30661 tcggccagga cactaaatac ggttcgtcct tcatcgttat gaccatcatt ggcggcggta
    30721 ttgtcactcc ggtcatgggt tttgtcagtg acgcggcggg caacatcccc actgctgaac
    30781 tgatccccgc actctgcttc gcggtcatct ttatctttgc ccgtttccgc tctcaaacgg
    30841 caactaactg aacatatttt ccgaataaag tgaggaatct gtaatgaaaa aaatcagctt
    30901 accgaaaatt ggtatccgcc cggttattga cggtcgtcgc atgggtgttc gtgagtcgct
    30961 tgaagaacaa acaatgaata tggcgaaagc tacggccgca ctgctgaccg agaaactgcg
    31021 ccatgcctgc ggagctgccg tcgagtgtgt catttccgat acctgtatcg cgggtatggc
    31081 tgaagccgct gcttgcgaag aaaaattcag cagtcagaat gtaggcctca ccattacggt
    31141 aacgccttgc tggtgctatg gcagtgaaac catcgacatg gatccaaccc gcccgaaagc
    31201 catttggggc tttaacggca ctgaacgtcc cggcgctgtt tacctggcag cggctctggc
    31261 agctcacagc cagaaaggca tcccggcatt ctccatttac ggtcatgacg ttcaggatgc
    31321 cgatgacaca tcgattcctg ccgatgttga agaaaaactg ctgcgctttg cccgcgccgg
    31381 tttggccgtc gccagcatga aaggtaaaag ctatctgtcg ctgggcggcg tttcgatggg
    31441 tatcgccggt tccattgttg atcacaactt ctttgaatcc tggctgggaa tgaaagttca
    31501 ggcggtggat atgaccgaac tgcgtcgccg tatcgatcag aagatttacg acgaagccga
    31561 actggaaatg gcgctggcct gggctgataa aaacttccgc tatggcgaag atgaaaataa
    31621 caaacagtat caacgcaatg ccgagcaaag ccgcgcagtt ctgcgcgaaa gtttactgat
    31681 ggcgatgtgt atccgcgaca tgatgcaagg caacagcaaa ctggccgata ttggtcgcgt
    31741 ggaagaatca cttggctaca acgccatcgc tgcgggcttc caggggcaac gtcactggac
    31801 cgatcaatat cccaatggtg acaccgccga agcgatcctc aacagttcat ttgactggaa
    31861 tggcgtgcgc gaaccctttg tcgtggcgac cgaaaacgac agtcttaacg gcgtggcaat
    31921 gctaatgggt caccagctca ccggcaccgc tcaggtattt gccgatgtgc gtacctactg
    31981 gtcaccagaa gcaattgagc gtgtaacggg gcataaactc gatggactgg cagaacacgg
    32041 catcatccat ttgatcaact caggttctgc tgcgctggac ggttcctgta aacaacgcga
    32101 cagcgaaggt aacccgacga tgaagccgca ctgggaaatc tctcagcaag aggctgacgc
    32161 ttgcctcgcc gctaccgaat ggtgcccggc gatccacgaa tacttccgtg gcggcggtta
    32221 ctcttcccgc ttccttaccg aaggcggcgt cccgttcacc atgactcgtg tcaacatcat
    32281 caaaggcctg ggaccggtac tgcaaatcgc ggaaggctgg agcgtggaat tgccgaagga
    32341 tgtgcatgac atcctcaaca aacgcaccaa ctcaacctgg ccaaccacct ggtttgcacc
    32401 gcgcctcact ggtaaagggc cgtttacgga tgtgtattcg gtaatggcga actggggtgc
    32461 caaccacgga gttctgacca tcggccacgt tggcgcagac tttatcactc ttgcctccat
    32521 gctgcgtatc ccggtatgta tgcacaacgt tgaagagacc aaagtgtatc gtccttctgc
    32581 ctgggctgcg cacggcatgg atattgaagg ccaggattac cgcgcttgcc agaactacgg
    32641 tccgttgtac aagcgttaat acattactcc ctgatgtgat gcccggtcgc tccggctacc
    32701 gggcctgaac aagcaagagt ggttagccgg ataaacaatg ttatccggct atattgcagg
    32761 agcgattatg aaacaagaag ttatcctggt actcgactgt ggcgcgacca atgtcagggc
    32821 catcgcggtt aatcggcagg gaaaaattgt tgcccgcgcc tcaacgccta atgccagcga
    32881 tatcgcgatg gaaaacaaca cctggcacca gtggtcttta gacgccattt tgcaacgctt
    32941 tgctgattgc tgtcggcaaa tcaatagtga actgactgaa tgccacatcc gcggtatcgc
    33001 cgtcaccacc tttggtgtgg atggcgctct ggtagataag caaggcaatc tgctctatcc
    33061 gatcattagc tggaaatgtc cgcgaacagc agcggttatg aacaatattg aacggttaat
    33121 ctccgcacag cggttgcagg ctatttctgg cgtcggagcc tttagtttca atacgttata
    33181 taagttggtg tggttgaaag aaaatcatcc acaactgctg gaacgcgcgc acgcctggct
    33241 ctttatttcg tcgctgatta accaccgttt aaccggcgaa ttcactactg atatcacgat
    33301 ggccggaacc agccagatgc tggatatcca gcaacgcgat ttcagtccgc aaattttaca
    33361 agccaccggt attccacgcc gactcttccc tcgtctggtg gaagcgggtg aacagattgg
    33421 tacgctacag aacagcgccg cagcaatgct cggcttaccc gttggcatac cggtgatttc
    33481 cgcaggtcac gatacccagt tcgccctttt tggcgctggt gccgaccaaa atgaacccgt
    33541 gctctcttcc ggtacatggg aaattttaat ggtccgtagc gcccaggttg atacttcgct
    33601 gttaagtcag tacgccggtt ccacctgcga actggatagc caggcagggt tgtataaccc
    33661 aggtatgcaa tggctggcat ccggcgtgct ggaatgggtg agaaaactgt tctggacggc
    33721 tgaaacaccc tggcaaatgt tgattgaaga agctcgtctg atcgcgcctg gcgcggatgg
    33781 cgtaaaaatg cagtgtgatt tattgtcgtg tcagaacgct ggctggcaag gagtgacgct
    33841 taataccacg cgggggcatt tctatcgcgc ggcgctggaa gggttaactg cgcaattaca
    33901 gcgcaatcta cagatgctgg aaaaaatcgg gcactttaag gcctctgaat tattgttagt
    33961 cggtggagga agtcgcaaca cattgtggaa tcagattaaa gccaatatgc ttgatattcc
    34021 ggtaaaagtt ctcgacgacg ccgaaacgac cgtcgcagga gctgcgctgt tcggttggta
    34081 tggcgtaggg gaatttaaca gcccggaaga agcccgcgca cagattcatt atcagtaccg
    34141 ttatttctac ccgcaaactg aacctgaatt tatagaggaa gtgtgaaatg ctgaaaacaa
    34201 tttcgccgtt aatttctccc gaactattga aagtgctggc agagatggga catggagatg
    34261 aaattatttt ttccgatgct cactttcccg cccattcgat gggaccgcag gtgatccgcg
    34321 ctgatggcct gttggtgagc gacttgctcc aggcgattat cccgttattt gaactggaca
    34381 gttatgcacc gccgctggtg atgatggcgg cggtagaagg tgacactctc gatcctgaag
    34441 tagaacgacg ttaccgtaat gcgctttcac tacaagcccc gtgtcctgac atcatccgca
    34501 tcaatcgttt tgcgttttat gaacgggcgc aaaaagcctt tgcgatcgtt atcacaggcg
    34561 aacgagcgaa gtacgggaat attcttttaa aaaaaggggt aacaccgtaa tctcataccg
    34621 gtacgcccgc atgacgcggg cggttatcga atgatggggt gaaaaatatg aaagcggcac
    34681 gccagcaagc gatagtcgac ctgctgctga accataccag cctgaccacg gaagctctct
    34741 ctgaacagct aaaggtcagt aaagaaacca ttcgtcgcga tctcaatgaa ttacagacgc
    34801 agggtaaaat tctgcgcaat catggacgcg ctaaatatat ccaccgtcaa aatcaagaca
    34861 gtggcgatcc ctttcacatc aggctgaaaa gccattatgc gcataaagca gatatcgcgc
    34921 gcgaggcgct cgcgtggatt gaagaaggga tggtgatagc cttagacgcc agttcaactt
    34981 gctggtatct ggcacgccag ttgcctgaca tcaacattca ggtcttcacc aatagccatc
    35041 cgatttgcca tgaactcggt aaacgcgaac gcattcaact gatcagttcc ggcggcacac
    35101 ttgagcgcaa atatggctgt tacgtcaatc cctcgctgat ttcccaactt aaatcgctgg
    35161 aaatcgatct gtttattttt tcttgtgaag ggatcgatag cagcggcgca ctgtgggact
    35221 ccaatgcgat caacgctgat tacaaatcga tgctattaaa acgtgccgcg caatcgttgt
    35281 tattgattga taaaagtaaa tttaatcgtt caggggaagc ccgcatcggg catctggatg
    35341 aggtaacgca cattatttct gatgagcgcc aggttgcaac ttctttggta acagcctgac
    35401 ggaaagggta gcaggccgga gacgacgccc cggccttgcc tgttatcgct cgtcgcgacg
    35461 accacccacc gcagcccaga tgcggcggac gtgcaccgtc acttcttcgc gatcgtgata
    35521 caactgccgc gcctgaatct gagcatttat gccatgttca tcaagctgtg cctgaatata
    35581 cgccagattg tgtgacactt cttcgtagcg ttttttcatc ggcagtttga ggttgaaaat
    35641 ggtttcacgg caccagccat taaccagcca ctgcgccatc aatgccgcaa ctttcgccgg
    35701 tttttcaacc atatcgcata ccatccagga gatattgctg cgcgtcggac ggaatttgaa
    35761 accgtcttcc cgcagccacg tcacctgtcc ggtatccatc agactttgcg ccatcgggcc
    35821 gttgtcgacg gaataaaccc acatgttgcg cttcaccagt tggtaggtcc agccgccagg
    35881 gcaagcgcct aaatccaccg cccacatccc gttcgccagg cgttcatccc actcatccgc
    35941 aggaataaac acatgaaatg cctcttccag tttgagcgtg gaacgactcg gcgcatctgc
    36001 cggaaatttc aggcgcggaa tgcccatata gaacggcgaa ttattgttgc tgtatgagta
    36061 accggtatag cagcagcctg gtgcaataaa gaatacatgc acaaccggac gcttcggcgt
    36121 ttcatagttc gccagcaccc cggcatcgcg caaggcagcg cgtagcggaa cagtaaattt
    36181 acggcagaat ttcagtaact ctttgctttc gttggtatcg gcaacttcaa cacgcagttc
    36241 accgcccttc tctactacgc cctgtaacat gccgacaatg ggggtaatac gatcttctgg
    36301 cggcaaatgc tgcaggagtt cccccaccac aaaccactgg cgggcaaaaa ttaatgaact
    36361 gaacggcagc tcacggatta acttatcgcc atcatcaggt tgataacatt cataaatgac
    36421 ataacccgca ttctctttca cgcgggcaaa accgaaaatt tcccgctggc cggctttatc
    36481 ggtaatttct gcggcgcact ctttttcaaa gcccggacgg cacagcaata caaccttatt
    36541 catgacttac gcccttgcgc tttaaacgga tagcaccaac taacattaac gcccagcccg
    36601 cgaggaagct cacgccgcca accggagtga caaacgccca caaacgcaga tgggacagcg
    36661 ccaggcaata aaggctgccg ctgaacaaca ccgtgcctaa cgcgaggaaa acgctactcc
    36721 agtaaaacca gatactgatg cgacgctgca ttgccaccgc cagacctaag atcgccagcg
    36781 tatgaaacgc ctggtattcg aggccggtct ggatccagcc catctcaacg gcccccatgg
    36841 ttttacttaa cacatgcgcg ccaaaagcgc ccagagccac aaaaatgaag ccgctaatgg
    36901 cggcgaaaat cagcataaaa cggctggtca tggtcgtacc ctacgtaaat tattgttcat
    36961 aacgaaagcg gaatttttct tgttcagcag cggctttcgc caggatccat tggcgaaagg
    37021 cggctatttt acccagttct gcctggctgt catgacaaac cagataaaaa gcgtttttac
    37081 tgaccagaac atcattaaac gggcaaacaa gacgtccggc ctcgatttca gattgcgcca
    37141 tcacgttatt tgccagcgcc actccctgcc cgtgaatagc cgcttgcagc accatggcgc
    37201 tatgactaaa aattggccct tgctgaacgt tgatatgatt taaccccaac tgtcgggtat
    37261 atgtctgcca gtcacggcgt gacgcatcat gtaataacgt atgtttagcc agatcttccg
    37321 gggtcttcaa gggtttttcg cctgtcagca gtagcggcga acacaccggc aataaatatt
    37381 cggcgtacag tttttccacc cgtagccccg gccagttgcc ccgaccataa aatatcgcca
    37441 catcaacatc atccgccagc ttatcttcct gacgatcaac cgcctggatt cgaacgtcaa
    37501 ttcccggata agctgaatta aagctggaaa gtcgcggaac caaccaatga atggcgaaac
    37561 tggggagtaa actgaccgtc aacgccccct tggcgctacg ggcctggagt ttacgcgtcg
    37621 cttcggttaa ttgcgaaaat atctctttga tatcgaggaa atagctttgc ccttcctcgg
    37681 tcagcaggag tgaacgatta cggcggcgga acagttttag ccccaaaaaa tcctcaagag
    37741 acttgatttg atgacttact gcggcctggg tcacaaaaag ctcttctgct gcgcgagtga
    37801 aacttaaatg gcgtgctgcg gcatcaaaaa ctcgtaaggc atttagcggt ggtaatcgtt
    37861 tagacatggc ttttaaactt tgatgttaaa tgaatttaac aattagatca cactgtgtaa
    37921 cctattagtt tttttaatct gagccattat aaattgtccg ttgagcttct accagcaaat
    37981 acctatagtg gcggcacttc ctgagccgga acgaaaagtt ttatcggaat gcgtgttctg
    38041 gtgaactttt ggcttacggt tgtgatgttg tgttgttgtg tttgcaattg gtctgcgatt
    38101 cagaccatgg tagcaaagct accttttttc acttcctgta catttaccct gtctgtccat
    38161 agtgattaat gtagcaccgc ctaattgcgg tgcttttttt taccttgcga tcgcgaatta
    38221 ctgatccagt tcgaccatct ctttcacgtc agtacggttg atctgctgtt tgttgccatt
    38281 agcgtcttta tacgaaatca taccggtatc gttatcagtc tgtggtttgc cgtcagagac
    38341 gatggtacgt ccgtcattgg tgtgcatcac atagttcgaa ccggaacagg cgctcagggc
    38401 aaaagtcagc atacaggcag aaataattgc ggcagtcttt ttcatcatct tctccttaaa
    38461 gcgattaata aatcttaata gtattgatta acaggctaaa attaacgcct aacactattc
    38521 agcatatgtt acttacgcgg cttcgccagg atatccagat aattctgatg gttagcactc
    38581 tccttgtatc aaagtgaatt ttgcgtcacg atcggtgcat caagccgagg agtaccatga
    38641 acgtttttaa tcccgcgcag tttcgcgccc agtttcccgc actacaggat gcgggcgtct
    38701 atctcgatag cgccgcgacc gcgcttaaac ctgaagccgt ggttgaagcc acccgacagt
    38761 tttacagtct gagcgccgga aacgtccatc gcagccagtt tgccgaagcc caacgcctga
    38821 ccgcgcgtta tgaagctgcg cgggaaaaag tggcgcaatt actgaatgca ccggatgata
    38881 aaactatcgt ctggacgcgc ggcaccactg aatccatcaa catggtggca caatgctatg
    38941 cgcgtccgcg tctgcaaccg ggcgatgaga ttattgtcag cgtggcagaa caccacgcta
    39001 acctcgtccc ctggctgatg gtcgcccaac aaactggagc caaagtggtg aaattgccgc
    39061 ttaatgcgca gcgactgccg gatgtcgatt tgttgccaga actgattact ccccgtagtc
    39121 ggattctggc gttgggtcag atgtcgaacg ttactggcgg ttgcccggat ctggcgcgag
    39181 cgattacctt tgctcattca gccgggatgg tggtgatggt tgatggtgct cagggggcgg
    39241 tgcatttccc cgcagatgtt cagcaactag atatcgattt ctatgctttc tctggtcaca
    39301 aactgtatgg cccgacgggt atcggcgtgc tgtatggcaa atcagaactg ctggaagcga
    39361 tgtcgccctg gctgggtggc ggcaaaatga ttcacgaagt gagttttgac ggcttcacga
    39421 ctcaatctgc gccgtggaaa ctggaagctg gaacgccaaa tgtcgctggt gtcataggat
    39481 taagcgcggc gctggaatgg ctggcagatt acgatatcaa ccaggccgaa agctggagcc
    39541 gtagcttagc aacgctggcg gaagatgcgc tggcgaaacg tcccggcttt cgttcattcc
    39601 gctgccagga ttccagcctg ctggcctttg attttgctgg cgttcatcat agcgatatgg
    39661 tgacgctgct ggcggagtac ggtattgccc tgcgggccgg gcagcattgc gctcagccgc
    39721 tactggcaga attaggcgta accggcacac tgcgcgcctc ttttgcgcca tataatacaa
    39781 agagtgatgt ggatgcgctg gtgaatgccg ttgaccgcgc gctggaatta ttggtggatt
    39841 aatgacaaac ccgcaattcg ccggacatcc gttcggcaca accgtaaccg cagaaacgtt
    39901 acgcaatacc ttcgcaccgt tgtcgcaatg ggaagataaa tatcgccagt tgatcatgct
    39961 ggggaaacag cttccggctt tgccagacga gttaaaagcg caggctaaag agattgccgg
    40021 atgcgaaaac cgcgtctggc tgggatatac cgtggctgaa aacggtaaaa tgcacttctt
    40081 tggcgacagc gaaggacgta tagtgcgcgg cctgctggcg gtgctgttga ctgccgttga
    40141 ggggaaaacc gccgccgaat tgcaggcaca gtcgccgctg gcattgtttg atgagctggg
    40201 attgcgtggg cagcttagcg cctcacgcag ccaggggttg aatgcgttaa gcgaggcgat
    40261 tatcgctgcg acgaagcagg tttaagcaca gaaccgggtc ggataagacg ttcgcgtctc
    40321 atccgacctg attgtttaac cctgacgcgc cgctttcgcc atcatcttct tcagcgcatg
    40381 agaaaccgca acaaacccaa aggtggcggt caccatcgtt gccgcgccaa atccagatgc
    40441 acaatccatc cgcttcggcc cttctgccgt ggctttcatc gcacacaccg taccgtctga
    40501 ctgcgggtac accagcgctt cagtagaaaa cacgcaatcc acgccgagct tacctttact
    40561 gtttttcact acgccaaaat cgcttttcag gcgctcgcgc aacttcgccg ccagcgggtc
    40621 ctgaatcgtt ttcgccagat cggtaacctg aatctgcgtc gggtcaatct gcccacccgc
    40681 gccaccggtc gtgaccagcg ggattttatt gcgccgacaa taagcaatca gcgccgcttt
    40741 gggtcgtaca ctatcaatgg catcaatcac gtacgaataa ccggcactca tatactgcgc
    40801 tacgttatcc ggcgtcacga aatcatccac caccgttaca cggcactccg ggttaatctg
    40861 gcgaatacgt tccgccatga ctttcgcttt tgccagccca acgttatcgc gcagggcatg
    40921 aatttgccga ttggtattgg tgacgcacac atcatccata tcgataagcg tgattgcgcc
    40981 aatccccgtg cgcgccagcg cttccgccgc ccaggaaccg acaccaccga taccgaccac
    41041 acaaatatgc gcgtcagcaa acagttgcaa cgctttttca ccatacagac gcgctgtgcc
    41101 accaaaacgc tgacgccatg catcactaat taccacagac atagcacctc agaattaaaa
    41161 agggtgaggt tttccctcac cctaaacgca taaatgcctg atgcgctacg cttatcaggc
    41221 ctacataact cctgcaatat tttggatttg catgatttgt gggccggata aggcgttcac
    41281 gccgcatccg gcatgaacaa cgcgcactta gtcaataatc aggatgtgag gttacccctc
    41341 accctgtcat atccgtaaaa acggcataca gaatatcaca tcagccgcta aagacgttac
    41401 ctgcgcccgg ggcggttttc agcacccaga cacgtccata gtggttgtac caacctgcgc
    41461 ggtgtccggc ttccggcccg atcccttgat agatatcgaa gtgttggcct ttgattgcgc
    41521 ccccgacatc caacgccacc atcagacgca attcgtactg accgttaaat ttgccgttat
    41581 tatccagcag cggcacttct gccagcaagg tagtacctgg cggaataatt gaacgatcgg
    41641 aggcaacaga agcacggcca accagcggca ccgcacttgc ccctttcacc ggtgcaaaag
    41701 attgcggttt aaagaagacg aaagacgggt tctgttccag cagctcgcga acctcggctt
    41761 cactgtgtgt ttcgccccaa tgacgaatcg cctgcatcga catatcttct tttttcactt
    41821 cgccacggtc gatcagcacc ttaccaatgc tgcgataggc atgaccgttt ttccctgcat
    41881 agctgaaaaa gttaagcgga ctgccatcac caaagtcgat atacccgcta ccctgcacat
    41941 ccataatgaa gttatccatc agggagttgc tgtaagcgag aatatattta tcactcagcg
    42001 cccctgcgta gatctccgca cgagacggca gacgaccacg ttttggcggc atacggtaaa
    42061 tcggatactg gaactcgccc tggcgggtat ggcgcgcctg aattaccggc gtgtaatagc
    42121 ctgtaaactg cacgttacca tagttgtcgg caccttccat ctgccaggca tcaatgccga
    42181 actgacgcat attgcgggta tcaccgcctg cgcgcagcca ctcttgcacc gcgttataaa
    42241 cattactctg gttgccatac agacgcggtg acgaattacg gatatggtta atttgctcgg
    42301 caaaatcacc ggcgttaatc ggcgcgccaa cggcatctgg ctggttcacc agagagaaag
    42361 gctgggtaaa tttcccgtct ttatattgct gtccgcgatc ggttggtttg gaagagcagg
    42421 cggcaagcat tgccacaacc gtgcccataa gaaggtactt tacccaacgt cctttcattg
    42481 ttctcttctt caggttaaaa aataaggcgc aacgaagata acaaaccgcc gcgtttaatg
    42541 aaatgagcag cctctccctg acgcaaattt tgcacaaaaa ataggcttta gtgatttgtt
    42601 tttgttcaaa atcatgccaa atccgtgatc ggggtaaaaa aaaggttgca tgaaaacgcg
    42661 agcggagtat agtgcgcatc cacggacgcg gggtggagca gcctggtagc tcgtcgggct
    42721 cataacccga aggtcgtcgg ttcaaatccg gcccccgcaa ccaattattg aacaccctaa
    42781 cgggtgtttt tttgtttctg ctctcccata aaaaaagcgc cattcagcgc ctttttatca
    42841 tccccttctc gccagcgtcg ccccatcggc aaaatacgct ttaattcccg caagaataga
    42901 ctccgcaact tcctgctgga aagtcgccgt tttcagttta cgctcttcct caacgttact
    42961 gataaacgcc gtttcgacca gaatggaggg aatatcaggc gctttcagca cggcaaaccc
    43021 ggcctgttca acctgatttt tatgcagctt gttgatttta ccgagcttat tcagcaccgc
    43081 tttaccaaac ttaaggctgt cggcaatggt cagcgactgc accatatcga acatggtgtg
    43141 gtcgacatag cggtcaccgc ttttgctcac gccaccaatc aagtccgagg cgttctgggt
    43201 ctgtgccaga tattttgccg cagtactggt tgcgcctttg gttgagagcg caaacactga
    43261 ggaaccgctc ggctggcgac tggtaaaggc gtcggcatgg atagagacaa acaggtcggc
    43321 acgctgtttc tgggcttttg ctacgcgcac ttgcaacgga atgaagatgt cttcattgcg
    43381 cgtcatgtac accttcatat tgccctcttt ctcgatcaga gagcgcagac ggcgagctat
    43441 ttgcaatacc acgtcttttt cgcgcgtttt gtatttcccc accgcaccgg agtcttcgcc
    43501 gccgtggcca gggtcaagca taataacaat aggacgatcg cgccctgctt tacccggttg
    43561 tggaccactt tgtgctggcg gcacctgctt ttcgaggtcg cctttgttgt aatcctccag
    43621 cagcgccagc agcgggtcct gcatatcctg tgcattggcc ggatagaggt ccatcaccag
    43681 acgctcttta aacccggcga ccggcgcaag ggcaaacagc tgcggtttta cgttttgctt
    43741 taattcaaaa accatccgta cggtctgcgg gtcaaattgc ccgacgcgcg ccgacttgat
    43801 gaacgggtcg tctgcacgaa tttgtgccgc catccccttg agtaccgagt tcaggtttac
    43861 atcttcgata tccaccacca cgcgttccgg gttactcaac gcgaactgct tatatttcag
    43921 ctgacgattt gattctaccg tcacgcgggt gtagctggac gcaggccaga cgcgcaccgc
    43981 cacgacctgg ctaaccgcag ccaggctgac ctgacttacg ctcaatagcc acatagcgcc
    44041 cgcgccttgc agtaaacgac gacggctgat tgcagtgttg gatcctgaca tgcctctccc
    44101 gagcaaaaga aatctaagct gtgtaacaag taaacgacta atttgaccgg aaactttagc
    44161 gaaagacgca taatctgtca tctaataaac ggtaaacatt ctttttatat tcacggcatt
    44221 actgataaaa aagtcgctct cgcataaaat ttacacttgc accctgcgaa aaaacagaat
    44281 aaaaatacaa taatttcgaa taataatgca aaggggtgtg ccgtggtaaa ggaacgtaaa
    44341 accgagttgg tcgagggatt ccgccattcg gttccctata tcaataccca ccggggaaaa
    44401 acgtttgtca tcatgctcgg cggtgaagcc attgagcatg agaatttctc cagtatcgtt
    44461 aatgatatcg ggttgttgca cagcctcggc atccgtctgg tggtggtcta tggcgcacgt
    44521 ccgcagatcg acgcaaatct ggctgcgcat caccacgaac cgctgtatca caagaatata
    44581 cgtgtgaccg acgccaaaac actggaactg gtgaagcagg ctgcgggaac attgcaactg
    44641 gatattactg ctcgcctgtc gatgagtctc aataacacgc cgctacaggg cgcgcatatc
    44701 aacgtcgtta gtggcaattt tattattgcc cagccgctgg gcgtcgatga cggcgtggat
    44761 tactgccata gcgggcgtat ccggcggatt gatgaagacg cgatccatcg tcaactggac
    44821 agcggtgcaa tagtgctaat ggggccggtc gctgtttcag tcactggcga gagctttaat
    44881 ctgacctcgg aagagattgc cactcaacta gccatcaaac tgaaagctga aaagatgatt
    44941 ggtttttgct cttcccaggg cgttactaat gacgacggtg atattgtctc agaacttttc
    45001 cctaacgaag cgcaagcgcg ggtagaagcc caggaagaga aaggcgatta caactccggt
    45061 acggtgcgct ttttgcgtgg cgcagtgaaa gcctgccgca gcggcgtgcg tcgctgtcat
    45121 ttaatcagtt atcaggaaga tggcgcgctg ttgcaagagt tgttctcacg cgacggtatc
    45181 ggtacgcaga ttgtgatgga aagcgccgag cagattcgtc gcgcaacaat caacgatatt
    45241 ggcggtattc tggagttgat tcgcccgctg gagcagcaag gtattctggt gcgccgttct
    45301 cgcgagcagc tggagatgga aatcgacaaa ttcaccatta ttcagcgcga taacacgact
    45361 attgcctgcg ccgcgctcta tccgttcccg gaagagaaga ttggggaaat ggcctgtgtg
    45421 gcagttcacc cggattaccg cagttcatca cggggcgagg ttctgctgga acgcattacc
    45481 gctcaggcga agcagagcgg cttaagcaaa ttgtttgtgc tgaccacgcg cagtattcac
    45541 tggttccagg aacgtggatt taccccggtg gatattgatt tactgcccga gagcaaaaag
    45601 cagttgtaca actaccagcg taaatccaaa gtgttgatgg cggatttagg gtaagcgatg
    45661 aaaattgtcg gatgcgacat gcgtaacact cgtgcgtcgc atccggcaat tacgtttatt
    45721 cccgcgaact aaacaacgcc gccagaccac tgcgccgctc agtacgagtg gcgattgccg
    45781 cacttaatat acgctcatcg gcatacagcg acagacggcg acgcgcgcgg gtcaccgcgg
    45841 tgtataccag ctctcgcgtt actaccggcg tgcgttggct cggtaaaatc aacgccgcat
    45901 ggtcgaactc cgatccctgc gatttatgta ccgtcatcgc ccacgtagtt tcgtgctctg
    45961 gcaagcgact cggttgcaca gacttaatat tgccgtccgg catcgcaaac cagacgcgcg
    46021 tcccctgccc gcgatccagc gcaataccga tatcgccatt aaacaaccca agcgcgctgt
    46081 cattacgggc aatcattacc ggtcgacctt cgtaccaacg agagtgcgga tgacgatgaa
    46141 ttttgcgctt ctgttgcata aactgctcaa ttcgctcatt cagtccagcc acgccaaacg
    46201 gcccttcccg cagggcgcac aaaagttggt actcattgaa cgcctgaatg attaaatccg
    46261 gctcggcacg cgcttgcagc agatccagat aacgtccata acccgcaaga gcttcctcaa
    46321 gcatcgcaat ataatcttct ccgctctgta aaagccgttt ttcgatatca gtaaaatcct
    46381 gctgaaaaac ggttttcact gccgttttat caccacggtt gatcgccgca gctaactgac
    46441 caatgccaga atcactgccg aaacgatagc ttttttgcag caggcagaga ctgtcgcgca
    46501 aagatgccgc ttctgtgcca gttcctgccg gaacgtgagt tcccgtcagg cggcttagct
    46561 gcccggcacg ctcggcggta aagccggcat tggcataagc gcagatatcg cccagcacag
    46621 ccccagcctc aaccgaggcc agttgatcac gatcgccgag aaagatcact cgcgcatgat
    46681 cgggcaaggc gtcgatcagt ctcgacatca taggcagatc gatcattgac gcttcatcta
    46741 ccaccagcac atcaagatgc agcgggttac cggcatgatg acgtaaacgc tggctacccg
    46801 gctgcgcacc cagcaatcgg tgcaaagtac tggcatcttc cggaatgcgt ttcttttgtt
    46861 catcggtcag cggtaactgt cgcaaagcct tgccgagaga ttcggttaag cgcgcggcag
    46921 ctttacccgt tggtgcagcc agacggatac ggcagcgttc gccgtcggcc atttgaatta
    46981 acgctgccag taacttcgcc acggtggtcg ttttaccggt gcctgggccg ccggaaatca
    47041 ccgagatccg ccgcgtcagc gccactgccg ctgcaacttt ttgccagtta atttcatcgc
    47101 ttactggaaa aagtttgtcc agggtttgcg ccagtagagc ttcatcaacc tcaatggcat
    47161 gattcacctc attgaagaag cgcgctaccg tccgctcgtt acaccacatg cgattcaaat
    47221 aaagacgatc gccacagagg atcatcggcg tgggttcatc tcccctgctg accgcttgag
    47281 aagccagcaa gcattcttcc caattttgta gctcaccgat ttcactgaca caggtcgcca
    47341 acagcggatg cgacgcctcg ttattttcca gtcgtgaaag cggcaaacag acgtgtccct
    47401 ctccggcatc atgacttaac agtgccgccg cgagggtgac ggcaggatgt tcatctcccg
    47461 ccacggtcag ggcaaattgc acatccagcg ggcgtagctg tttgtgctcc acagcttcca
    47521 gtaattgctt ttgcaatttc attacgcctc ctccagggtc ataccggcaa acatctcatc
    47581 catcagggca atcaacccgg cgttgggtcg ggttgtgtaa atcccttgtt gcggatgttc
    47641 tttatcaacg ccacgcagga acagatagat aacgccgcca aagtgacgat catagtcgta
    47701 atcagcaatg cgatggcgca gataacgatg cagcgccagg gtataaagct gatattgcag
    47761 atcatagcgg tgtgcctgca tcgctgctgc catagcctgt tgggtgtaag ccgaactgtc
    47821 ttcacccagc cagttggatt tatagtcgag caggtaataa cgcccttcgt ggcggaatac
    47881 caggtcgata aagcctttta acatgccgcg tacctgcatg aactccagcg gcgggcagcc
    47941 agcggatagc gggtcaaact ggcgaattag tgcatcaagc tggctggcga tgagcggttc
    48001 gctaatcggc aggtaaaact ccatctccac ctgtttatcg cggtcggaaa gctgactcag
    48061 gctaacaccc gtttcattga gaggtgcctg gaggacagcc gtgatccact cggtcaacac
    48121 cggttcccac tgcgattcaa agccgccgag ttccagtttt tcctgtaccc agttcgggtc
    48181 aaccggctgg gtaaaatcga ggtcttcaaa caaactgtgc aagaatgtcc ccggtgacgc
    48241 accgcgcggg aactgatgcg gtgttaacgt cggttcttca acgacgctga ccacgcctgc
    48301 ggcatcaaca tccagccgtg gcatcagatc ctgagcgata ccgtgaccac gctgctgcaa
    48361 gccggagtag ctggtgacac gccagttatc gccgggcaat cgttgtagtg tcctcgcatt
    48421 cagttctgca gttaaagcat cattaacttg ccagggctgg ttatcaccag tttgtgccgt
    48481 ttgccaggca atatcatcat cgcataacgc ttcaatacag gtgcgaagcc ctgccgcatc
    48541 ttgcggttcc cctttttgca gcaaacgccc gagcgcactt tggtggacgt cggtgtcacc
    48601 ttttttatcg ccacgacggc gcaccagcgg tgcaacgccg agactgcaat gccaaaccga
    48661 acgcgtcagc gccacgtaaa gcaaacgcag atcttccgcc agacgttcga cctccgcgag
    48721 gtcgacgctt tctggcgcag cgttaagatc caaaactgcc tcaaacgagt ggcgatcgtg
    48781 ataaaacgcc tgatcctgga cgcggaaatt ggtgataaac ggcagccaga ccaatggata
    48841 ttccagccct ttcgatttgt ggatcgtgac aatctgcacc agatgtttat cactttcgag
    48901 acgcatttgt tggctggagg cattactgtc tggctcgagg atatgttgcg ataaccagcg
    48961 taccagcgca tgttcacttt ccagctgcgt tccggcttct tgtagcagtt cgctgatatg
    49021 caagatatcg gtaagacgcc gctcaccgcc tgccgttgcc agcaagtttt cagcaatgtt
    49081 acgcgccgac atcagcgccc gcagcatcgg cataacgcca cgtttgcgcc agatttgccg
    49141 ataaccatcg aactcttcga ctaccacatc ccacgcatgt tcgtcattgt tcagcgtttc
    49201 gatatccagc gcgttcagcc ccatcattga cgttgccagc gcactacgca gggtgttctc
    49261 acgttcgggc gtcatcaccg cctgcaacaa ccaaagcatt tcctgcgctt ccagagtttc
    49321 aaaaacactg tcgcggttcg aaaggtaaac ggaagggatt tccagcaacg ttaaggcgtc
    49381 gcgcacctgg gcggcctcct ggcggctgcg caccagcaca ctgatgtccg aagcacgcac
    49441 cggacgcgcg tcgtcgccgt tcatcagcaa cgcttcgccc cgctgtccgg cttgtagcca
    49501 gtcgcggatt tgcgcagcac atacctgcgc catggtactt tgatagtcgc caacgccgca
    49561 gctttcgcct tccatcagcc acattttcat cgcaggctgc gtttcacctt taaacacaaa
    49621 acgtaacgcc tgatttttcc cggctgattt cactggaata aacggtattt cgcgaaacat
    49681 gaacgcgtca tcagtctggc tgaaaagctt gttcacactg ttcaccattc ctggtgcgga
    49741 acgccagttg gtgtctaaag tgtagtgggc gtgaacttcg ctacgcgcct tcatataagt
    49801 gaagatatcc gcaccccgga atgcatatat ggcctgtttc gggtcgccaa tcagcaacaa
    49861 tgcggtttcc ggctgatggt gccagatacg gcgaaaaatt cggtactgct gggggtcggt
    49921 atcctgaaat tcatcgatca ttgccaccgg gaatcgcgta cggatcgccg ctgccaacac
    49981 ctcgccgctt tcgctacgca gcgcggaatc gagccgactt aacatgtcat caaaacccaa
    50041 ttcgccacgg cggcgttttt cacgcgctac tgtttcgcgg atctcagcca atgcgcgggt
    50101 tatcaccaga tcacggatcg acaatggttc tgcaagcagt tgttcgatcg cctcaaacag
    50161 tggatgtcgc ggggtttccc ccccggcttt cgtgcgatct tctaagaaac gctgagagaa
    50221 tttttccagc gactccggta actgataact gttggtctct tcttctgccc aggcgctgat
    50281 cttctcgatc catttagcct gattgctacg gttaaacttg cgtcgatcaa taccagaaga
    50341 ttcgatcagc gcatccagtt cacccactgc gtcgcgccac tgctgtttta ccgtatcaat
    50401 acgcgccaca atttgcgcgt ggcgggaagc cagcgtttca tcatcgggcg gcggtgcttt
    50461 gataaccggt gcttcgcctt gcagataacg attaatatcg cgcagcaacg cctgcggccc
    50521 tttccaggtt tcaaagacca ccagggcaat ttcacgcggc agcgggtagc agtggcgacg
    50581 ccagaaatcg gcgcaggcct ggtagcgtag cagagactca tcttcaatca gctgctgctc
    50641 aaacagcata ccggattcaa aggcattcag gttgagcatg cgctggcaaa aaccgtgaat
    50701 agtaaagact gccgcttcat ccatctgccg ttcggctaac aacaaccact gcgcggcttg
    50761 cgctttatcg tcgatctctt ccagcaggcg ttcgtacagt ggattgtcgg tggtttcacg
    50821 cagacaggcg atgcgcaact cgtggatatt gctacggata cgaccgcgca attctgccgt
    50881 ggcagcctcg gtaaaggtga ccaccagcag ttcttcaacg gtcagcgggc ggggaaaggc
    50941 ggcggaaccg cctagtccaa gtaacaggcg caaatagagc gccgcaatcg taaaggtttt
    51001 gcctgtgccg gcagaggctt caatcaggcg ctcgccctgt aagggcaagc gcaaaggatc
    51061 tagtgtctcg gcgacatcac tcattctttt cactcatcag gggcattgtt tgctgcaacg
    51121 cgctgacgtt ctcccacact ttccagcctt caggatgcac atattcggct ttcccgttct
    51181 ggctgccgga aatctgcgac aggatagcca tgccttgcgg ctcgaccacc gcctgatgga
    51241 agaaatcagc aagtttttgc ggcgtcagca gttttatctg ggccacgatt ttatcacgcg
    51301 aatcgaagcg catattgccg cgatcgaaat ctttacttaa cttcgatgct tcttcgccga
    51361 gcgtttgcgg tgcctgcagc atctgggtaa ttaccgcctg ctggatttgc gcaaactcat
    51421 ctggcttcat cgctcgcaat tttgcctctg cggttgggaa aaacgccttg taacgctccc
    51481 acaagaatga aggctgttta tcattgcttt gcaaaaggaa gcccatgccc cactgacgcc
    51541 ccacgctcat tggaaacgca aacacggcat agcccaattg ttcttcggta cgcaactgat
    51601 tgtagaacca cggctgtacg atctgcccca acagagagct ataggctgag ctggtgtatt
    51661 catcgtagcc agtcggtaca aataccgctg ccagtgcgga gtcggtgctg ttaccggctt
    51721 tttcaaagat gacggattgt tttttatcga ccactacatc tttgtttcga caccactctg
    51781 aaccatcagc gcccaactgt ttttgcacat cgcgtgccag cgttgttgcc tgggcctcgg
    51841 tcatgttgcc gataaccata aactctggtc gagcccctga ttttaaggcg tcgcgatagg
    51901 ccagcacctc tttcaacgta atggagggca aaattttacg ccgttcatct cgcgagaagt
    51961 acggcacttg cgagagcatc tgcgcgggca taatcgcctg ctcaaacgct ttaccctttt
    52021 ctgcggaatc catcatctgg ttataccagg acttcgcctg ctcaagctga tcttccgtag
    52081 cggtatagct aaagtacccc tcgagcaatg cctggaacag ctgcggcaga cgctgggtgt
    52141 aaccattagc attaaccata aggccgttgt tagcgttggt ggaaaaactt atgccaccaa
    52201 ccgacgcctg gttgcttaac tgatcaagcg ccagccctgc gagataatca ttgagcgcaa
    52261 acatcacctg attgcgggcg ctgtccatgg ctttcggatt acgcaaaatc aggctgacat
    52321 cagctttggg ttcgctggaa aaataacggc ttggcgcata caccacgcgc agattcgact
    52381 catcaacaat cagctctgga tggtcatatt tcttctctga cttaatcagc gagaaatcgt
    52441 caggaatata ggggttaagc tccggtaagg agagcgcaat attggcagct ttttgctgcc
    52501 agtcagcgaa agtttgttcg ctgattttat cgacctgata cggcgcatcg acaaaataag
    52561 ccgttttatt gtgcggctct ttcgggctga tataccagat acgcgcattc tgcggcgtca
    52621 tcatcgccag acgttctttt actgctttag catcgtaccg atcggcaata ttgactgcat
    52681 ccagcgtatg ctcaaccgga acgcgaatca tggtatctgc cagccattcg acgtaatcca
    52741 tatcacgggt gatcgacgga taacggaagt cgatatccag cacattcgcc agttcatcga
    52801 agtattgttt atcaatgcct ttttcacgta acagattgag atagctaaaa attgccgcca
    52861 caacctgatc gcgattagcc aggcctttat cggttaaaga cgcagagatc gctaatacgc
    52921 cgctgttgcc gttgacgata ggatcggagt tggcgctaat gccctcaact aatccctgct
    52981 tttgcagcca gtcggaaagt gtacctgggc tgcgattacc aatcagatag gtaatcaatt
    53041 catccgtttt actacggaac ttcgctgagt tgttatcgat gcgaaactca acgcgcagaa
    53101 ctttacgcgg cagtgccggg acgtaatgaa tgataatgcc cttttgcgcg tcggtgacta
    53161 ccggcacggt gatttccggt tttttgctct ctttgttcgg cacgcgacca aaggtgtccg
    53221 ccgccatttt tgccaactcc ggcagcggtt tattgctgta aataaccgcc ttcatcagat
    53281 tggcggaata gtacttctcg tggaaatctt tcagcgcctg ctgcaccgga ttaccaggtt
    53341 tatcgcttaa agtttcgagg ttaccaccag aaaactttga accggggtgt gccgggttaa
    53401 tggtttctgc gctgacctgt gccatgcgca tcccgtcacg cgtacgcgcc atggttaatt
    53461 cagcgttcac cgcattacgc tcacgttcgg catatttctt gtcgagcaaa ggttcagcaa
    53521 tagcatcggc caggcggtct accgcaccag gcaaggcgtc gttctcaact tccagataga
    53581 aagccgtgcg atacggcgca gtgctggcat tgtgactacc gccgtgcatt ttgagatatt
    53641 cggccagact gtcagcctgc gggtactttt tcgaccccat cagactcata tgttcaaggt
    53701 aatgtgccag cccctggtac gcctcgggat cttccagcga cccaacgggc accaccagcg
    53761 ccgagagcga tttaactgcc tgcggatcag aaaccagcaa gaccaccata ccgttatcca
    53821 gacgtatagc ctgatactgg cggttatctt tatcactttt acggatggtt tcctgaatcg
    53881 gctgccatcc cgtttctgcc tgacttaagg gtgcccaaag ggcaacaaac aacaataatg
    53941 ctttgaacca ggtgctgcgg ggcattcacg gacctcataa tcaactttat tttctggcca
    54001 gattcaacag gttaacgcaa atcatctgcc agaatttaat cttgtgctgc acgagtcagc
    54061 ctatgtctat atatccatca gtccgtgact ggtgcgcatc ataaagtaag cggatagatt
    54121 gcgcaatttt tatacagcac tcatgactga ttaaagcgaa acagcggtaa caggaaacgt
    54181 tgcgactgtt caacgatggc ctccattgtc tctggtgtta attgccgcca gagcctttga
    54241 taccagatat catcaccttc gccacgcacc atcatgttgc cttcgtaagc ctgaaggaat
    54301 ttcgtacggg ctttttgcaa cgtggaatcg tcatccagca tggcatcgtt ttgcgcgtca
    54361 taacaggttt ttagccacgc gccgccactt tcaggtaaca ccagcaatgg cgcggacatc
    54421 ccttcacgat acccctcaat cagttgtgag aggtaatgca aagcctgttc ggctgcaagc
    54481 ggcggaaaac gccactcgcc gtctttgcgt agaaaaaggc gactttcacc attaccaccg
    54541 ctggcacagt agacaaggtg ttccagccaa agttgcattc cctgcgccac acttaataaa
    54601 gagggacgcc agcgcaacag gccatccggc tgcacctgcg gcaaccagcc agttatctgc
    54661 acaccgttgc aggcgagatc aatttccata ctctgccccg gctggcgaca ggcaatgact
    54721 ctgtcggcaa gctgctgcat ctcctggcac tgtgtttccc agaaaatttc accaaaagcg
    54781 ccatacggta aatcccctgc cgcccggaag cggcggaaca agcgttcggc atcatcctgc
    54841 tcaaccagtg cattcaataa ctgctgattg atttgataac ggctaagccc ttccagaata
    54901 aatggctcgg tgtctgggat ttcgctgtct tcagtacgga agttcacctg caaacgcatc
    54961 tggaagaacg cccgcaccgg atgtgcccag aatcgttgta gcgtttccag cggcacggtt
    55021 tccggtaagg taaacggcag cggctgaaca aattcagaat gtgctttacc agcctggctg
    55081 gccgcaggta gccattcacg agcatagctt tgtcgttcgc ctggctggta gttttgcgga
    55141 tcaaacggca tccgggtatg gaggcaagta agatgcgctt ttacccttgc ctcgctttca
    55201 tcacagttga gcgcttcatc gcccggtaga taatgacttt gcccgatgta gtcgatcagt
    55261 tcctgcacca gtaccgacgg gaaacgttca ctgttatcct gaatggaacg cccgatatag
    55321 ctgatataga gtttttgctg cgcggaaatt aacgcttcca ggaacaggta gcggtcgtca
    55381 tcgcgacggc tacggtcgcc acgcttcggt ttctggctca tcaggtcaaa gcccaatggc
    55441 gcaagctgac gtggataaac gccgtcgttc attcccagca ggcaaaccac tttgaacgga
    55501 attgaacgca ttggcatcag agtacaaatg ttaaccggtc cggcgagaaa acgctggctg
    55561 atacgttctt gatccagacg ctgcgccagt tcatcacgca atagtgacag cggcaccgcg
    55621 tcgccatact gcgcacctaa accttcggcg ataatcgcct gccattgttg ttcgatcagc
    55681 gtcatcgccg cttcggtttc cgcatccggc aggaagaagg cgttgagcat atcgcgacaa
    55741 accggcaacc actcttctag cggacgctcc tgtgccagcc cgcgacgcca gatgtttagc
    55801 tgcattagca gtgaagccag atgccccacc agttctgcaa ttaagccgct cgattcatca
    55861 taaggtagaa ccgattgcca ctcgccctgc gcgctctcca tcgcgtagcc cagcaacata
    55921 cgcgtcaggc caaatcgcca ggtgtgttgt ccggtggcgg ggagttccag ctcgcgaacg
    55981 ttgtcgtcat ctatccccca acgaatgccg gattcgttga cccactggcg taaataacgc
    56041 agcccttctt cggtgatgtc aaaccgcgcc gccagcaccg gcacatccag taatgccagc
    56101 acgtcttccg acacaaagcg gctgtctggc aacgataaca ggctgataaa cgcttccagt
    56161 accggatgcg actgccgcgc ccgacggtcg gaaatggcgt aaggcaggta acgatccgca
    56221 ggtgcgctac caaacacagc ctgaataaac ggactgtagc tgtcgatatc agccaccatc
    56281 acgatgatgt cgcgcggagt aagtgtcggg tcttcttcca gcatcgccag caggcgatcg
    56341 tgcaaaactt caacttcacg ctgcgggcta tggcaaacgt ggaaggtgat actgctatcc
    56401 agtggatcaa gcgggcgttt gttatcgcta cgggaaaact cttcgatgtt cacaccagca
    56461 acggcacggt tttccagttc cagaatgtca gactgaatgt tatgcagcag gttatctggc
    56521 gtgacatcga caaaggcgtc cagctcctgg ctgctctcca ggtcagaaag gagataaatg
    56581 tagtcgcgcc caagcttacc ccatgaagcc agcagcgggt tgccgacatc ctgttcacca
    56641 tcgctgttaa agagctgccc ggcattttcg ctatcacgaa atagcggcaa ttcgcgatct
    56701 tcaaaactgt gtcgacgctg acgggtcagc agtttcgcca gataagcagg atctttaata
    56761 tcgccccagt aataacggca ggggttggta aacaggagat ggatttcaat atgtttaccc
    56821 agcgcctgga gcgcctggag ataaacaggc ggtaacgcgg aaataccgca tataaagacg
    56881 cgcgaaggta accccggcgg gcaggtcgtc gcggactcca gcgtttcgat aaagcgctga
    56941 tagagattgg cgcggtgcca acgcggttgt ccgagttcat gggtatattc caccagcgcc
    57001 ttccacaacg gcgcttgcca ggcctgtgct tctcccagcc cttcaaccaa atgtcctgtt
    57061 tcccactgtg ccagccactc cgggcgatag accagatact ggtcaaacag gtccgccgct
    57121 tttgaggaaa gctggaacag ttttcgcttg tcgctatcgt cagtcagata atgccgcaac
    57181 agggtaaagt cttcgcgatc cagcaattgc ggcagcagag tcatcagttt ccagctcatg
    57241 ctctgtttgt taaaggcgct ctctttgggg atctccggta acacccggac gaacatatcc
    57301 cagataaagc tcgctggcag cggaaaatca atgtttgccg caataccaaa cttttgcgac
    57361 agggtcattt gcagccactg cgccataccg gtactttgca ccagaatcat ctctggttcg
    57421 aaaggatcgt ccagccgttc gcgttcgaca ataaactcca tcaacgcttc cagcacgtcc
    57481 agacgattgg aatggtagac ccttaacata gcggctcctg actactgacg attcgggcaa
    57541 tgcaggcggg tcatctcgcc ttctctgccc ccgggtgaaa ctagcgtaac gctgatgctg
    57601 acacatcccg cctgcgatgt ctgcattcgg ttgacctgcc agttggcagg tggcgaaatc
    57661 gcgcgcagtt gcgtttgctg ccaaccatgc cgccagagct gttggtactg gtttctgctg
    57721 gcgagactgt tcattaatgt tcgctggata cccgataacg cagtgacaat catcaccatc
    57781 agcaccatcg caaccattac ctccggcagg ctaaagcctt gttgattctt cagggaagct
    57841 gacataacgc cctctctttc agcggacaaa aatcgctcca gccgcgtggc gaaaaaacaa
    57901 tgtttccatc aatgacttcg cctgttcgcc acaacgaaac gccttcataa ccggcaacca
    57961 ataaggcttc attatctgcc agtaaacgca aacaaacccg ggcatcggtt ccagcgtact
    58021 gcgagcactg aactgcgggc tgcgtctgcc aggagtgcat tttcccccac gccagcgccg
    58081 actgaacgat ggcctggcgg cgcaatgact gactttccat gctcacgcga gaggcaaaac
    58141 tgcgatcctg ctgactcatt ccttgcaata gcaagctacc caaaaccagc agcatcagaa
    58201 ccagagccag tgacgaaaca cctttttcgc ggttcacagg ttgaatcctg tcacgctata
    58261 gctggcatcc accacggttt gcggttcaga cttactggca gcacgcatat taaccgtcaa
    58321 caccggcgag aagccgctga catcctgacg tacgacctga aaagtgtcga taatgatggc
    58381 atccggatta gtgactttat cccagccctt accttcacag gatgtcgcac cgcgtagcgt
    58441 ttccagcaca tgctccttca gacgaaatcc aatctggtca gactctttta ccggttcgcg
    58501 atcccagata ccgttactgt tcgcatccca ctgcacaatg atacagtcat cctgtccgac
    58561 aatttccagc ccttcgccgg tacagctgcc atgacaataa cccgccctct ggagatgctt
    58621 cgcgacggta aatacccgca gccagatttc atcttccagc gccagcttac gggtgctcgt
    58681 taaactttca cgctgtaacg caggcagaaa gcgtgcagcc cccagcaaca atacgctact
    58741 gatcgccata gcaatcaaca cttccagcag agaaaaacct tgctctttta caggcatcct
    58801 tctgtttctc cttgctgaca aagccggagt cttccccacg gcgaaaccac cagccaccac
    58861 tcgcccgttg agtttttgaa gcgaatatgc ccggcccatg cggtattgcg caggccaaag
    58921 aaagcaagcg aaggtgtcag gtcgctcatt tcgacttcgg gccagcgtgg cacaaagacc
    58981 aatggtgaac tgccatgaca ggtattggcc ccagcagcgg aactcacaag gcaccataac
    59041 gtcccctccc tgataacgct gatactgtgg tcgcggttat gccagttggc atcttcacgt
    59101 aaatagagca aatagtcccg cgcctggctg gcggtttgcc atagccgttg cgactgctgc
    59161 cagtattgcc agccatagag tccacttgcg cttagcatga ccaaaatcag catcgcgacc
    59221 agcgtttcaa tcagcgtata accacgttgt gttttcatgc cggcagtatg gagcgaggag
    59281 aaaaaaagac gagggccagt ttctatttct tcggcgcatc ttccggacta tttacgccgt
    59341 tgcaggacgt tgtaaaattt cgggaaggcg tctcgaagaa tttaacggag ggtaaaaaaa
    59401 accgacgcac actggcgtcg gctctggcag gatgtttcgt aattagatag ccaccggcgc
    59461 tttaatgccc ggatgtggat cgtagccttc aatctcaaag tcttcgaaac ggtagtcgaa
    59521 gatggattcg ggtttacgtt tgataatcaa cttcggcagc ggacgcggtt cgcggcttaa
    59581 ttgcagatga gtttgatcca tatgattgct gtacaggtgc gtgtcgcccc ccgtccagac
    59641 aaaatcgccc acttccagat cacactgctg cgccatcata tgcaccagta acgcgtagct
    59701 ggcaatgtta aacggcaggc cgaggaaaac gtcacaggag cgctgataaa gctggcaaga
    59761 gagtttgccg tctgccacat agaactggaa gaacgcatgg cacggtgcca gcgccatttt
    59821 atccagttcg cctacgttcc acgctgaaac aataatgcgg cgcgaatccg ggtcgttttt
    59881 cagctggttc agtaccgtag tgatctggtc aatatgacga ccatctggcg ttggccaggc
    59941 gcgccactgt ttaccataca ctggtccgag gtcgccgttt tcatcggccc attcgtccca
    60001 gatggtgaca ttgttttcgt gtagataagc aatgttagtg tcgccctgca gaaaccacag
    60061 cagttcgtgg atgatggaac gcaggtggca acgtttagtt gtcaccagcg ggaatccatc
    60121 ctgcaggtta aaacgcatct gatgaccaaa aatggaaagc gttccggttc cggtacggtc
    60181 gtttttctgt gtgccttcgt cgagcacttt ttgcatcagt tctaaatact gtttcatggt
    60241 tcctcaggaa acgtgttgct gtgggctgcg acgatatgcc cagaccatca tgatcacacc
    60301 cgcgacaatc atcgggatgg aaagaatttg ccccatgctg atgtactgca cccaggcacc
    60361 ggtaaactgc gcgtcgggct ggcggaaaaa ctcaacaatg atgcgaaacg cgccgtagcc
    60421 aatcaggaac aagccagaga cagctcccat tgggcgcggt ttacgaatat acaggttgag
    60481 gataataaac agcaccacac cttccagcag cagctcgtaa agctgtgatg ggtggcgcgg
    60541 cagcacaccg taagtgtcga aaatggattg ccactgcggg ttggtttgca gcagcaaaat
    60601 atcttctgta cgggagcctg ggaacagcat ggcaaacggg aagttcgggt caacgcggcc
    60661 ccacaattca ccgttaataa agttgcccag acgcccggca ccaagaccaa acggaatgag
    60721 tggtgcgata aaatcagaaa cctggaagaa ggaacgttta gtacggcggg caaagataat
    60781 catcaccacg ataacgccaa tcaggccgcc gtggaaagac atgccgccgt cccagacacg
    60841 gaacagatac agcggatcgg ccataaactg cgggaaattg tagaacagaa cataaccaat
    60901 acgtcccccg aggaagacgc cgaggaagcc cgcatagagt aagttttcaa cttcattttt
    60961 ggtccagccg ctgcccggac gattcgcccg tcgtgttgcc agccacattg caaaaatgaa
    61021 acccaccaga tacatcaggc cgtaccagtg aagcgccacg ggtcctattg agaaaatgac
    61081 cggatcaaac tccggaaaat gcagatagct actggtcatc tgtcaccaca agttcttgtt
    61141 atttcgctga aagagaacag cgattgaaat gcgcgccgca ggtttcaggc gctccaaagg
    61201 tgcgaataat agcacaaggg gacctggctg gttgccggat accgttaaaa gatatgtata
    61261 tgatccgcgc tataaccctc cgcgaatcag cccgcccatg ccgcgacgct ccataaaggc
    61321 tgcaacctga tggcgaactt cggtcgccag ttgcgcttcc agactacgct gcgcaagatt
    61381 ttctgcttcg gcataatcaa tgcgccgcag caggtatttt acccgcgcta cagaacgtcc
    61441 gttcatagac agatggcgat acccaagccc aatgaggatt gccacgcaca tgggatcgcc
    61501 cgccatttca ccgcacaaac ggagatcgat tccatgtatt tccgcttccc gggcgatcat
    61561 cgccagagct cgtaacattg caggatgaag actgtcataa atgttcgcca cccgggtatt
    61621 gttgcgatca acggccagaa tgtattgagt cagatcgttg gtgccaacag agatgaaatc
    61681 gacccgcttt gccagatgcg gcagcataaa taccattgac ggcacttcca gcatgatgcc
    61741 gatacgtggt ttgggaattt cgtaaccgat catctcctcg acttcacgtc cggcacgttc
    61801 aatcaggcgg cgtgcttcat caacttcatc gaggcttgtg accatcggca acagaatatt
    61861 caggttgccc gtagcggcat tagcacgcag catcgcccgc acctggatca agaagatctc
    61921 cggctgatcg agcgtaatgc gaatcccacg ccaacccagg catggattct cttcgctgat
    61981 cggcatgtaa ggcagctgct tatctgctcc gacatccagc gtacgcaagg tgacgggttt
    62041 atcattgaac atttgcagca tcccctgata ctgcgccacc tgttcttctt ccgacgggaa
    62101 accactttgc agcatgaatg ggatttcagt gcgataaaga ccgatgccat caatacggct
    62161 gcccagtttt tcttcatgtt ccgggcttaa accagcattg agcatgactt ttatacgctc
    62221 accgcttttt aactgcgcgg gtaaattgac gtcatcttcc gccagacggc taagctcaat
    62281 ctcttcacta attagccgct gatattcttg cagcagtacc ggctccggat cgaccagcaa
    62341 ttcaccgcga tagccatcaa cgatcagcgt cctacgatgc agcaccgaag gctgaatatc
    62401 cgcgcccatc acggtaggga tccccagcgc acgtaccatg atcgcagcat gggagttggc
    62461 tgcgccatct cgcacgacaa caccgactaa gcgatcctgg ggcagctcag caagagttgt
    62521 cgctgacagt tcatctgcca ccagaatgaa acgttccggc caggcgttcg gcccttgatt
    62581 agcgtcatca agatgaaaca gcaatcgctg acccagcgca cgtaaatcgc cagcccgctc
    62641 tttgagatag ttatcgctta gcgcggcaaa ctgttcggca aatttttcaa tgaccgtttt
    62701 taccgcccac tctgccaccg agcctttatc aacctcggca aacaattcgc gacgcagccg
    62761 ggtgtccgaa agcaggtgcg agtaaagatc gaaaatagcc gccgtttctt tttgtgctcc
    62821 ggcggcaaag cgtttgctgt agcggcgaaa ctcgtttgcc gcttcttcca gcgccccggt
    62881 caatcgttcg cgttccagag ccggatccag cgttgatgcc tgatacacct gttccattaa
    62941 aggtaacgtg gcatcctgcc agccttcggc aatcgccaca ccaggtgctg ccggtaatgc
    63001 gcggattcgc gtctggcgat attgcccaaa caaggcagtc aactgcgact gagaaagaat
    63061 agctgccatc tgggtggcaa gcgtcaccag gaaggattct tcactttcgt catactggcg
    63121 caactctcgt tgctgtacca ccagtacacc aagcaactgg cgacgttgaa taattggtac
    63181 gcctaaaaac gcgcggaaac gttcttcttt tacggagggg atgtatttga agctggggtg
    63241 cttttgcgca tctgcaaggt ttatcggttc cgccagcctg ccaaccaggc cgacgatccc
    63301 ttcatcaaac gcgagcgtta cagtgcgacc gcgtggtttt ttcagccccc gggtcgccat
    63361 caggtagtaa caacgtcgat catgatcggc caggtagacc gaacagacct cggtatccat
    63421 cgcaagacag atgtcggtaa ccagaatatt taacgcctca ttcaggcgtg gtgcgctggc
    63481 taccttttcg actatttcgc gcaggcgagt gagcataatt ggcgtgactt aacctctttt
    63541 acgtcgataa gcagatgcgt tttgtggttt tggcgtattt tcctgcagtg acatcaccac
    63601 actcgcgaac tctttcatta ccctacggta gacatcacgt ttaaatgaca ccacctgtct
    63661 gaccggatac cagtaactta cccatcgcca gccgtcaaac tctggtgtgc tgctggtttg
    63721 catattgatt tctgcatcgc cgctcaccag ctgcaagaga aaccattttt gtttttggcc
    63781 gatacaaacc ggcttcgtgt cccaacgcac caaacgtttc ggtaatttgt agcgcaacca
    63841 gttacgcgtt gaagcaagga ttcgaacgtc tttgcggctt aatcctactt cttcaaacaa
    63901 ttcacggtac atcgcctgct ctgcggattc tccggggttg attccgcctt gcggaaattg
    63961 ccaggagtgc tgaccaaatc gccgggccca cattacctgc ccctggcgat tacaaatcac
    64021 gatacctacg tttgggcggt agccatcgtc atcaatcacc ggactacctc aaaataaagc
    64081 tttatatacg aatgattgtt tcatactcca ggaagacggt aaaccactct ctgcagggca
    64141 ttacacacta ataacaattg aataactcac agttatgtgc agagttataa acagaggaag
    64201 gggtggatag ccgtttttat tcaccttttc tgtggataga gttgtgaaga actacggaat
    64261 tactacggga aaacccggag cattctgaat aagcccgat
//
LOCUS       DAPGWB010000008        63759 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.008, whole genome shotgun sequence.
ACCESSION   DAPGWB010000008 DAPGWB010000000
VERSION     DAPGWB010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 63759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 63759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..63759
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.008"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            18..1067
                     /locus_tag="RHX79_000497"
     CDS             18..1067
                     /locus_tag="RHX79_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HDV2195710.1"
                     /translation="MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGF
                     SALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGI
                     SGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEA
                     SKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAI
                     SPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAI
                     FNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLI
                     VGGGAINYVIQSVIA"
     gene            1141..1998
                     /gene="nfo"
                     /locus_tag="RHX79_000498"
     CDS             1141..1998
                     /gene="nfo"
                     /locus_tag="RHX79_000498"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HDV2195711.1"
                     /translation="MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPL
                     TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG
                     LSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH
                     LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLN
                     DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK
                     AQQTEKAVA"
     gene            2002..3090
                     /locus_tag="RHX79_000499"
     CDS             2002..3090
                     /locus_tag="RHX79_000499"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HDV2195712.1"
                     /translation="MNDREKQILKILRRNPLIQQNEIADILQISRSRVAAHIMDLMRK
                     GLIKGKGYILTEQDYCVVVGAINMDIRGMADIRYPQAASHPGSVHCSAGGVGRNIAHN
                     LALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLAIANKQEET
                     ILAINDTHILQQLTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADEIPMFVDT
                     VSEFKANKVKNWYSRIHTLKPTQNELEILWGQPIKDDNDRIRAVNSLHQQGVKRIFVY
                     LKDESVFCSDKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVA
                     CAAISRASGSLNNPTLSADNALSLVPMV"
     gene            complement(3146..4396)
                     /locus_tag="RHX79_000500"
     CDS             complement(3146..4396)
                     /locus_tag="RHX79_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDV2195713.1"
                     /translation="MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGG
                     IMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVL
                     PAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFAR
                     LLSPATESSQVSFNNLSFTETPPKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIGGVGGWFGFAHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVA
                     YLNFSPYLQTGGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGL
                     RALAAATLSNLMSATIAGFFIGLA"
     gene            complement(4496..5437)
                     /gene="rihB"
                     /locus_tag="RHX79_000501"
     CDS             complement(4496..5437)
                     /gene="rihB"
                     /locus_tag="RHX79_000501"
                     /EC_number="3.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosylpyrimidine nucleosidase"
                     /protein_id="HDV2195714.1"
                     /translation="MEKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLD
                     KTLINGLNVCQKLEINVPVYAGMPQPIMRKQIVADNIHGETGLDGPVFEPLTRQAEST
                     HAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFT
                     PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSD
                     IMNFTLKTQFENYGLAGGPVHDATCIGYLINPDSIKTQEMYVEVDVNSGPCYGRTVCD
                     ELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH"
     gene            5567..6265
                     /gene="yeiL"
                     /locus_tag="RHX79_000502"
     CDS             5567..6265
                     /gene="yeiL"
                     /locus_tag="RHX79_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311082.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator YeiL"
                     /protein_id="HDV2195715.1"
                     /translation="MKEIHNNDLKQQLMSESAFKDCFLTDVSADTRLFHFLARDYIVQ
                     EGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIE
                     ECWCLALPMKHYRPRLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFIL
                     LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA
                     LEMDPENKFSGMMQ"
     gene            complement(6333..7583)
                     /locus_tag="RHX79_000503"
     CDS             complement(6333..7583)
                     /locus_tag="RHX79_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDV2195716.1"
                     /translation="MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGG
                     IMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVL
                     PAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFAR
                     ILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVA
                     YLSFSPYLQTGGTLEVKTIAIISFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGL
                     RALAAATLSNLMSATIAGFFIGLA"
     gene            complement(7677..8615)
                     /gene="psuG"
                     /locus_tag="RHX79_000504"
     CDS             complement(7677..8615)
                     /gene="psuG"
                     /locus_tag="RHX79_000504"
                     /EC_number="4.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HDV2195717.1"
                     /translation="MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQN
                     AQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFV
                     VAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTV
                     VCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFEVSIRLDSATEIARA
                     MAVKWQTGLNGGLVVANPIPEQFAMPEESINAAIDQAVAEAEEQGVIGKESTPFLLAR
                     VAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLAG"
     gene            complement(8603..9544)
                     /locus_tag="RHX79_000505"
     CDS             complement(8603..9544)
                     /locus_tag="RHX79_000505"
                     /EC_number="2.7.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine kinase"
                     /protein_id="HDV2195718.1"
                     /translation="MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGR
                     NIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLD
                     NTGEMLVAINDMNISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAANVP
                     VFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVVAWFHQHGLN
                     RLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESV
                     RFAQGCSSMALSCEYTNNPDLSIANVISLVENAECLN"
     gene            complement(9968..11659)
                     /gene="fruA"
                     /locus_tag="RHX79_000506"
     CDS             complement(9968..11659)
                     /gene="fruA"
                     /locus_tag="RHX79_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIBC"
                     /protein_id="HDV2195719.1"
                     /translation="MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMA
                     IVLGDSIPNDSALNGKNVWQGDISRAVAHPELFLSEAKGHAKPYTAPVTATAPVAASG
                     PKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAAD
                     LVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKTQTATTE
                     GKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGS
                     AFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLIS
                     TQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAV
                     LLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMV
                     ARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIG
                     AKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA"
     gene            complement(11676..12614)
                     /gene="fruK"
                     /locus_tag="RHX79_000507"
     CDS             complement(11676..12614)
                     /gene="fruK"
                     /locus_tag="RHX79_000507"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HDV2195720.1"
                     /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN
                     VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE
                     VTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQ
                     CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIA
                     HVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR
                     LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN"
     gene            complement(12614..13744)
                     /gene="fruB"
                     /locus_tag="RHX79_000508"
     CDS             complement(12614..13744)
                     /gene="fruB"
                     /locus_tag="RHX79_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HDV2195721.1"
                     /translation="MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGML
                     AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAAS
                     SDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIV
                     ASDLLTLQALNAARLKEAGAVDATFVTKAINEQPLNLGQGIWLCDSAEGNLRSAIAVS
                     RAANAFDVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLT
                     SDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSL
                     MKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA"
     gene            14112..15293
                     /gene="setB"
                     /locus_tag="RHX79_000509"
     CDS             14112..15293
                     /gene="setB"
                     /locus_tag="RHX79_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter SetB"
                     /protein_id="HDV2195722.1"
                     /translation="MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD
                     EVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWN
                     RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGP
                     PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMQKELPLATGTIEAPRRNRRDT
                     LLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFA
                     KRLGKRFLMRVAAVGGVCFYAGMLMAHSPVILLGLQLLNAIFIGILGGIGMLYFQDLM
                     PGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNYHAVFWFAMVMIIATLFCLLRIKD
                     V"
     gene            complement(15290..15544)
                     /locus_tag="RHX79_000510"
     CDS             complement(15290..15544)
                     /locus_tag="RHX79_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HDV2195723.1"
                     /translation="MKCRPGCGACCTAPSISSPIPGMPDGKPANTPCIQLDEQQRCKI
                     FTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAP"
     gene            15699..16271
                     /gene="yeiP"
                     /locus_tag="RHX79_000511"
     CDS             15699..16271
                     /gene="yeiP"
                     /locus_tag="RHX79_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007750416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P-like protein YeiP"
                     /protein_id="HDV2195724.1"
                     /translation="MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFS
                     DVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE
                     ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST
                     GLVIQVPEYLSPGEKIRIHIEERRYMGRAD"
     gene            16494..17960
                     /locus_tag="RHX79_000512"
     CDS             16494..17960
                     /locus_tag="RHX79_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HDV2195725.1"
                     /translation="MKTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLT
                     DRVLNAQGGDWGICEISLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLN
                     AKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHS
                     APGILVEALKRRRERGLTPFTVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHV
                     SFPGTMVDRIVPAATDESLAEISQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVA
                     GVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAHISDCMQDRAFRHAARTLMLNE
                     QAPTLQIKDVDLTQYADKLIARFANPALKHKTWQIAMDGSQKLPQRMLAGIRIHLGCE
                     TDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRELVAGSSSEQRVTALLSLRE
                     VFGDDLPDNPHFVQAIEQAWQQIVQFGAHQALLNTLKI"
     gene            18078..19064
                     /gene="yeiR"
                     /locus_tag="RHX79_000513"
     CDS             18078..19064
                     /gene="yeiR"
                     /locus_tag="RHX79_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding GTPase YeiR"
                     /protein_id="HDV2195726.1"
                     /translation="MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGI
                     DGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQIL
                     DLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE
                     SEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLA
                     ALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPE
                     GLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA"
     gene            19103..19816
                     /gene="lpxT"
                     /locus_tag="RHX79_000514"
     CDS             19103..19816
                     /gene="lpxT"
                     /locus_tag="RHX79_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kdo(2)-lipid A phosphotransferase"
                     /protein_id="HDV2195727.1"
                     /translation="MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQ
                     KLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTA
                     VVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF
                     MWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDR
                     LITFFDKSLPGKNKHFQNK"
     gene            20228..20794
                     /gene="mepS"
                     /locus_tag="RHX79_000515"
     CDS             20228..20794
                     /gene="mepS"
                     /locus_tag="RHX79_000515"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional murein DD-endopeptidase/murein
                     LD-carboxypeptidase"
                     /protein_id="HDV2195728.1"
                     /translation="MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVG
                     SETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTF
                     REQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
                     SSGVIISSMNEPYWKKRYNEARRVLSRS"
     gene            20975..22531
                     /locus_tag="RHX79_000516"
     CDS             20975..22531
                     /locus_tag="RHX79_000516"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HDV2195729.1"
                     /translation="MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYD
                     TLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDK
                     KTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSG
                     VFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA
                     GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQ
                     FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL
                     IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD
                     MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET
                     ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR
                     WLKKPYTPQW"
     gene            22613..24427
                     /locus_tag="RHX79_000517"
     CDS             22613..24427
                     /locus_tag="RHX79_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311096.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV2195730.1"
                     /translation="MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFD
                     YVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLI
                     AESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV
                     KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRITSW
                     KMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMEND
                     AKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDF
                     EWMNKALFYNAWSRTNSYFQNTEYAARNYPEAAELVLLAPMKKDLPSEVFTQIYQPPV
                     SKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQ
                     HSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRVWRAMPWPSSDLQISWSSEYINST
                     YNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAW
                     WDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE"
     gene            24428..25522
                     /locus_tag="RHX79_000518"
     CDS             24428..25522
                     /locus_tag="RHX79_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HDV2195731.1"
                     /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEF
                     GNAGVLPGAGGEGIRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHER
                     YFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAV
                     YNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWY
                     QKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWK
                     HVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTL
                     YIFTLIGLLLNIVSDISYTLVDPRIDFEGR"
     gene            25522..26547
                     /locus_tag="RHX79_000519"
     CDS             25522..26547
                     /locus_tag="RHX79_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2195732.1"
                     /translation="MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIAND
                     KPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGA
                     TSINFATDKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVL
                     AGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL
                     VGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL
                     TSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDA
                     FDPNKAV"
     gene            26549..28138
                     /gene="yejF"
                     /locus_tag="RHX79_000520"
     CDS             26549..28138
                     /gene="yejF"
                     /locus_tag="RHX79_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter ATP-binding protein
                     YejF"
                     /protein_id="HDV2195733.1"
                     /translation="MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGES
                     GSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHVSDQTLRGVRGNKIAMIFQEPM
                     VSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGG
                     ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLS
                     IVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLL
                     DVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLR
                     LINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH
                     QPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILD
                     EPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQG
                     PCARVFATPQQEYTRQLLALS"
     gene            complement(28142..28486)
                     /locus_tag="RHX79_000521"
     CDS             complement(28142..28486)
                     /locus_tag="RHX79_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195734.1"
                     /translation="MTSLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGPCGDNSLVAL
                     KLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV
                     AIAEPFSNYNPF"
     gene            complement(28819..30009)
                     /gene="bcr"
                     /locus_tag="RHX79_000522"
     CDS             complement(28819..30009)
                     /gene="bcr"
                     /locus_tag="RHX79_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter Bcr"
                     /protein_id="HDV2195735.1"
                     /translation="MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPA
                     GSTQMTLSTYILGFALGQLIYGPMADSFGRKPVVLGGTLVFAAAAVACALANTIDQLI
                     VMRFFHGLAAAAASVVINALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVW
                     LSWHYIFWILALAAILASAMIFFLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSY
                     MLASGFSFAGMFSFLSAGPFVYIEINHVAPENFGYYFALNIVFLFVMTIFNSRFVRRI
                     GALNMFRSGLWIQFIMAAWMVISALLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDE
                     FPHMAGTASSLAGTFRFGIGAIVGALLSLATFNSAWPMIWSIAFCATSSILFYLYASR
                     PKKR"
     gene            complement(30037..30732)
                     /gene="rsuA"
                     /locus_tag="RHX79_000523"
     CDS             complement(30037..30732)
                     /gene="rsuA"
                     /locus_tag="RHX79_000523"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HDV2195736.1"
                     /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPE
                     HDVAYDGNPLVQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLD
                     IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDL
                     TKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGE
                     YRPLTEEEIASVV"
     gene            30881..32641
                     /locus_tag="RHX79_000524"
     CDS             30881..32641
                     /locus_tag="RHX79_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDV2195737.1"
                     /translation="MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAEL
                     ARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVAR
                     NLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGW
                     IYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQS
                     NGLFSEADLNRELKKQQRITPHIISQIMEFAEKRKGVMIFAATVEHAKEIVGLLPAED
                     AALITGDTPGAERDVLIEDFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLY
                     QQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANT
                     FWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
                     CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERF
                     RLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQ
                     VREKVFDYEGRFRRAHELRG"
     gene            32766..33050
                     /gene="rplY"
                     /locus_tag="RHX79_000525"
     CDS             32766..33050
                     /gene="rplY"
                     /locus_tag="RHX79_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HDV2195738.1"
                     /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDH
                     DKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA"
     gene            complement(33189..34196)
                     /gene="yejK"
                     /locus_tag="RHX79_000526"
     CDS             complement(33189..34196)
                     /gene="yejK"
                     /locus_tag="RHX79_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HDV2195739.1"
                     /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELH
                     RVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGF
                     VLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
                     PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE
                     RQNVRQQVYSYCNEQLQAGEEIELESLSKELAGVSEVSFTEFAAEKGYELEESFPADR
                     STLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG
                     N"
     gene            34378..34605
                     /locus_tag="RHX79_000527"
     CDS             34378..34605
                     /locus_tag="RHX79_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YejL family protein"
                     /protein_id="HDV2195740.1"
                     /translation="MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNL
                     INTSIAPAQRQAIANSFARALQSSINEDKAH"
     gene            34625..36385
                     /gene="pbgA"
                     /locus_tag="RHX79_000528"
     CDS             34625..36385
                     /gene="pbgA"
                     /locus_tag="RHX79_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin transport protein PbgA"
                     /protein_id="HDV2195741.1"
                     /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWP
                     TTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLL
                     IDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL
                     RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFL
                     EKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFE
                     KQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITAL
                     NQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNR
                     WFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAG
                     RGIPLSEDEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTP
                     ASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDE
                     KPQLSLLLQVLTDEKRFIAN"
     gene            36460..36536
                     /locus_tag="RHX79_000529"
     tRNA            36460..36536
                     /locus_tag="RHX79_000529"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:36494..36496,aa:Pro,seq:ggg)
     gene            36746..37987
                     /locus_tag="RHX79_000530"
     CDS             36746..37987
                     /locus_tag="RHX79_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000101915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDV2195742.1"
                     /translation="MARKTTPLTITEIKNARPGEKEYTLQDGGGLFLLVKPSGSKIWR
                     FTYYRPADKKRTIISLGSLNDVSLSDARERRNEYRSLIAKGTDPQDYERRKREAESRK
                     KGNTFEKVALDWYEMKKGQNLAYNTIKDIWRSLEKYVFPYIGNTPIDTLTARRFVEIL
                     TPIKARGNLETLKRVLQRINEVMDFAANSGLIDINTAANVRKAFPSPTKKHMPTIRPE
                     QLPQLMHDLSVASIERQTRLLIEWQLLTVARPAEAAAARWEEIDLDAETWTIPAGRMK
                     MRRDHVIPLCGQAMAVLETMKPISAHREHVFPSLKNPMLPMNSQTANAALRRMGYAGV
                     LVSHGLRAIFSTAANEEGFEPDVIEAALAHVDTNEVRRAYNRSNYLEKRVVLMRWWGE
                     FVEAAATGVTIASGKRGIRAV"
     gene            38104..38346
                     /locus_tag="RHX79_000531"
     CDS             38104..38346
                     /locus_tag="RHX79_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000262088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195743.1"
                     /translation="MFFNEKVSPACGEGLQLALMANREFWSTYDPEDKSTAPTKHEVV
                     SFLRSRGASKNLAESIDKVLRPTSLKCGGRPKKWKR"
     gene            38517..38723
                     /locus_tag="RHX79_000532"
     CDS             38517..38723
                     /locus_tag="RHX79_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HDV2195744.1"
                     /translation="METIRKILTRQEVKNILRIKADSSLQDMINAGKFPKGFKIGLRR
                     VGWYEDEVLAWLKEREEEARGTAA"
     gene            39685..40182
                     /locus_tag="RHX79_000533"
     CDS             39685..40182
                     /locus_tag="RHX79_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001432001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host cell division inhibitor Icd-like protein"
                     /protein_id="HDV2195745.1"
                     /translation="MNKPDVKNLLIANASQGYDLPAPAKSGAGIGVLEMSKAIYDAPA
                     SFLSSAFAHIKVMVGWAGASSEAPVPFDAGYANPVQSTASEIGVSCGGNSSLSKEAAN
                     MATIPTLIHSHTVFIWRFIIFGASESQIIHVTAWTEREARNHCPSGCVAVFAARIRQE
                     VRHVQ"
     gene            40172..40624
                     /locus_tag="RHX79_000534"
     CDS             40172..40624
                     /locus_tag="RHX79_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195746.1"
                     /translation="MCNNTRQDAAAEAIKTLMHALIDISVIADRAHKHATSETEYAGA
                     FVPHSLAVMQFSADMALNEAKAILITDCENGGVMRDDRFNALKQEFSGVPGDAADALS
                     SMPELIRADFFLLSTKEYKSTGLDVLNIAADYADFVTEVILRKATDGD"
     gene            40626..40859
                     /locus_tag="RHX79_000535"
     CDS             40626..40859
                     /locus_tag="RHX79_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195747.1"
                     /translation="MRDIYHETIDRAFLALSHSENMLEILRLWLETLGDNERDKQKSR
                     IVTALITLLEPVIMELQEIDLLHDRYKEQHTGE"
     gene            40865..41164
                     /locus_tag="RHX79_000536"
     CDS             40865..41164
                     /locus_tag="RHX79_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HDV2195748.1"
                     /translation="MKLKYPGLTASGKTRTKFMRGDIYRDQYGGTVMIKGVEERRVTY
                     RREGYEYDCVMPVYQFARDFSLVQTAPHNVPTSNARARANIQKLKTMINGFRGKK"
     gene            41161..42915
                     /locus_tag="RHX79_000537"
     CDS             41161..42915
                     /locus_tag="RHX79_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707046.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDV2195749.1"
                     /translation="MKLAPNVKQQSRGIKHKGTEVIIFAGSDAWAHAKQWQEHDARMA
                     GDNEPPVWLGEQQLSELDKLQIVPEGRKSARIYRAGYLAPVMIKAIGQKLAAAGVQDA
                     NFYPDGMHGQKVENWREYLARERQNLSDGLVIELPVKQKAQLSQMADSERAQLLADRF
                     DGVCVHPESEIVHVWRGGVWCPVSTMELSREMVAIYSEHRATFSKRVINNAVEALKVI
                     AEPMGEPSGDLLPFANGALDLKTGEFSPHTPENWITTHNGIEYTLPAPGENIRDNAPN
                     FHKWLEHAAGKDPRKMMRICAALYMIMANRYDWQMFIEATGDGGSGKSTFTHIASLLA
                     GKQNTVSAEMTSLDDAGGRAQVVGSRLIVLADQPKYTGEGTGIKKITGGDPVEINPKY
                     EKRFTAVIRAVVLATNNNPMIFTERAGGVARRRVIFRFDNIVSDAEKDRELPEKIAAE
                     IPVIIRRLLANFTDPEKARALLLEQRDGDEALAIKQQTDPVIEFCQFLNFLEEARGLM
                     MGGGGDSVKYTTRNSLYRVYLAFMAYAGRSKPLNVNDFGKAMKPAAKVYGHEYITRKV
                     KGVTQTNAITTDECDAFL"
     gene            43204..43482
                     /locus_tag="RHX79_000538"
     CDS             43204..43482
                     /locus_tag="RHX79_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707047.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195750.1"
                     /translation="MHTSGRFNKSLKKRRDRTEPKYRALDMTEHALKVAIRTIDRHAG
                     EGYAKEHPDLISAFMTTAAANFATLTEREIAEAEQVTTINVKTGEQTA"
     gene            43479..43901
                     /locus_tag="RHX79_000539"
     CDS             43479..43901
                     /locus_tag="RHX79_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001758993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDV2195751.1"
                     /translation="MTAQIAAYGRLVADPQLKTTSKGTQMAMASMAVPLPCSQANDGT
                     ATMWLSVLAFGRQADALAKHHKGELVSVAGNMQVSQWTGQNGETRQGWQVIADSVISA
                     RTVRPGGKKGQQGQATDALNRAKQQAGNDDPYGDNIPF"
     gene            44174..45214
                     /locus_tag="RHX79_000540"
     CDS             44174..45214
                     /locus_tag="RHX79_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HDV2195752.1"
                     /translation="MSDLYSPAMLIQVVNAEDIQWQINSLFINLFFKRVVTFETRDIA
                     LDIIDDPDIPMAAFCSPMVGSKVSRDEGYESKVIRPGYMKPKSSIDPNKIAVRQPGVS
                     PEQFNAYSSRSFKIKRALVRQAQAIRARIEWLAVQAVTTGKNIIEGDGIERYELDWNI
                     KPQNIITQFGGTEWGGRDLSTFDPNDDIEEYAEISEGTTNIIVMGRNVWKKYRAFKAV
                     KDCLDTRRGSNSVLETALKNLGDSVSFKGYVGDVAIVVYSGRYTDEDGTERYFLDPDL
                     MVLGNTSLQGIVAYGGIQDPELIRMGLTKAELAPKNYIVPGDPAIEYVQTHSAPQPIP
                     ARINRFVTVRIG"
     gene            45224..45565
                     /locus_tag="RHX79_000541"
     CDS             45224..45565
                     /locus_tag="RHX79_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001710064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HDV2195753.1"
                     /translation="MATHYTELMAGTEALVTTLGIFSANKGVIPAFTPLMQEDVTGAL
                     VVWDGTSAGKAVYVSAVQIDTATKTQAQVYKTGVLNVDALNWPESVTQLSAKVAAFVG
                     SGISVQPLARV"
     gene            45575..45919
                     /locus_tag="RHX79_000542"
     CDS             45575..45919
                     /locus_tag="RHX79_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000572593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HDV2195754.1"
                     /translation="MIERDSQLRELLDIDDKMRLSERLVDMDQVVELTTLSRRTLLNL
                     EARGEFPERVQVTKGRKAWYLSEVVAWINNIPRASNYCLVPTPEKPDAALCLKIERAR
                     RNALKGRNKLIG"
     gene            46121..46663
                     /locus_tag="RHX79_000543"
     CDS             46121..46663
                     /locus_tag="RHX79_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000835287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDV2195755.1"
                     /translation="MKSHLMNKKNMAQSCRVSATAFDKWGVTPVERKGREAFYDVASV
                     IDNRVSNAINQITDDKGEIDNDELLRVRIRLLTAQAEAQELKNERERGDVISTEFCIY
                     ALSKLASQISSIMDSLPLTMQRRFPQMTPAMLDGLKKEVVRACNACTKLDENIPRMLS
                     DYLMETTGNVPDKFQPDKDK"
     gene            46915..47196
                     /locus_tag="RHX79_000544"
     CDS             46915..47196
                     /locus_tag="RHX79_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195756.1"
                     /translation="MTETEALGIIRSITGISQQADEQATQPDTVTAENYARVMAEVMR
                     RDGIELNGVDIRNIRTRVLEMLSYRRRVQMYQEKEKITYQWKKPERLRR"
     gene            complement(47832..50423)
                     /gene="yejO"
                     /locus_tag="RHX79_000545"
                     /pseudo
     CDS             complement(47832..50423)
                     /gene="yejO"
                     /locus_tag="RHX79_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311108.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter YejO"
     gene            50743..51390
                     /gene="narP"
                     /locus_tag="RHX79_000546"
     CDS             50743..51390
                     /gene="narP"
                     /locus_tag="RHX79_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite response regulator protein NarP"
                     /protein_id="HDV2195757.1"
                     /translation="MPEATPFQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASA
                     IDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAG
                     ADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELD
                     VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ"
     gene            complement(51425..52477)
                     /gene="ccmH"
                     /locus_tag="RHX79_000547"
     CDS             complement(51425..52477)
                     /gene="ccmH"
                     /locus_tag="RHX79_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis thiol:disulfide
                     oxidoreductase CcmH"
                     /protein_id="HDV2195758.1"
                     /translation="MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCP
                     KCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTV
                     LLWVLPVVAIGIGGWVIYARSRRRVRVVPEAFPEQSVQEGKRAGYIVYLPGIVVALIV
                     AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKN
                     PGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNR
                     LGGELLRQLVRSDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIE
                     RSIAQAMQHLSPQESK"
     gene            complement(52474..53031)
                     /gene="dsbE"
                     /locus_tag="RHX79_000548"
     CDS             complement(52474..53031)
                     /gene="dsbE"
                     /locus_tag="RHX79_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbE"
                     /protein_id="HDV2195759.1"
                     /translation="MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKP
                     VPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVG
                     MNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA
                     GDLNPRVWEEEIKPLWEKYSKEAAQ"
     gene            complement(53028..54971)
                     /gene="ccmF"
                     /locus_tag="RHX79_000549"
     CDS             complement(53028..54971)
                     /gene="ccmF"
                     /locus_tag="RHX79_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis heme lyase CcmF"
                     /protein_id="HDV2195760.1"
                     /translation="MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAW
                     LLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLL
                     MSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRD
                     LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLCGRLDSTYARFTRPWTLAAWIF
                     LTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWT
                     LLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARG
                     HKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFN
                     TMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVA
                     MTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYS
                     VERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKPETVLYAEKRY
                     YNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGG
                     LLCLFDPRYRKRVSPQKTAPEAV"
     gene            complement(54968..55447)
                     /gene="ccmE"
                     /locus_tag="RHX79_000550"
     CDS             complement(54968..55447)
                     /gene="ccmE"
                     /locus_tag="RHX79_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HDV2195761.1"
                     /translation="MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEIL
                     YGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYQGILPDL
                     FREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS"
     gene            complement(55444..55653)
                     /gene="ccmD"
                     /locus_tag="RHX79_000551"
     CDS             complement(55444..55653)
                     /gene="ccmD"
                     /locus_tag="RHX79_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HDV2195762.1"
                     /translation="MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHR
                     AILRGVAQQRAREARLRAAQQQEAA"
     gene            complement(55650..56387)
                     /gene="ccmC"
                     /locus_tag="RHX79_000552"
     CDS             complement(55650..56387)
                     /gene="ccmC"
                     /locus_tag="RHX79_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmC"
                     /protein_id="HDV2195763.1"
                     /translation="MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFA
                     PADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAV
                     FTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAG
                     ILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTL
                     MRMRNLILLMEKRRPWVSELILKRGRK"
     gene            complement(56429..57091)
                     /gene="ccmB"
                     /locus_tag="RHX79_000553"
     CDS             complement(56429..57091)
                     /gene="ccmB"
                     /locus_tag="RHX79_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HDV2195764.1"
                     /translation="MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQ
                     LLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWM
                     VTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVL
                     LSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRIS
                     IQ"
     gene            complement(57088..57705)
                     /gene="ccmA"
                     /locus_tag="RHX79_000554"
     CDS             complement(57088..57705)
                     /gene="ccmA"
                     /locus_tag="RHX79_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HDV2195765.1"
                     /translation="MLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLL
                     RLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDG
                     DAAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVN
                     GVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTGAA"
     gene            complement(57724..58326)
                     /gene="napC"
                     /locus_tag="RHX79_000555"
     CDS             complement(57724..58326)
                     /gene="napC"
                     /locus_tag="RHX79_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type protein NapC"
                     /protein_id="HDV2195766.1"
                     /translation="MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGF
                     NTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIR
                     KLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTA
                     QKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF"
     gene            complement(58336..58785)
                     /gene="napB"
                     /locus_tag="RHX79_000556"
     CDS             complement(58336..58785)
                     /gene="napB"
                     /locus_tag="RHX79_000556"
                     /EC_number="1.9.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDV2195767.1"
                     /translation="MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQE
                     GAIRMPKEQERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISP
                     THFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK"
     gene            complement(58782..59645)
                     /gene="napH"
                     /locus_tag="RHX79_000557"
     CDS             complement(58782..59645)
                     /gene="napH"
                     /locus_tag="RHX79_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDV2195768.1"
                     /translation="MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPW
                     FGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKR
                     LFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILLGSALTGTLIWEWI
                     NPVSLMGRSLVMGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITV
                     AATDRQKCNRCMDCFHVCPEPHVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFT
                     ITTRWSSGAKS"
     gene            complement(59632..60327)
                     /gene="napG"
                     /locus_tag="RHX79_000558"
     CDS             complement(59632..60327)
                     /gene="napG"
                     /locus_tag="RHX79_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDV2195769.1"
                     /translation="MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGV
                     RLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMC
                     EDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEA
                     ITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHH
                     YRFGWLEGNNGKS"
     gene            complement(60334..62820)
                     /gene="napA"
                     /locus_tag="RHX79_000559"
     CDS             complement(60334..62820)
                     /gene="napA"
                     /locus_tag="RHX79_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HDV2195770.1"
                     /translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKA
                     PCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLL
                     RMKNGKYDKEGEFTPITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAAS
                     KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAE
                     MHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYII
                     QNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVA
                     EYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHL
                     LTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPS
                     GTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVS
                     DPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFS
                     RRFKTEEVWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFY
                     LQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGE
                     GYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRA
                     FPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAA
                     QLVNKLTLDATDPLSKETDFKKCAVKLEKV"
     gene            complement(62817..63080)
                     /gene="napD"
                     /locus_tag="RHX79_000560"
     CDS             complement(62817..63080)
                     /gene="napD"
                     /locus_tag="RHX79_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDV2195771.1"
                     /translation="MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQL
                     IVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP"
     gene            complement(63070..63564)
                     /gene="napF"
                     /locus_tag="RHX79_000561"
     CDS             complement(63070..63564)
                     /gene="napF"
                     /locus_tag="RHX79_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HDV2195772.1"
                     /translation="MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACI
                     NACENNILQRGAGGYPSVNFKNNECRFCYACAQACPESLFSPRHTRAWDLQFTIGDAC
                     LAYQSVECRRCQDSCEPMAMIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEY
                     LHAH"
BASE COUNT        16028 a        16797 c        15784 g        15150 t
ORIGIN      
        1 ggttaaagga gagggttatg acgaatatca ccttacagaa acaacatcgt acactgtggc
       61 attttattcc ggggttagcc ctgagtgcag ttatcaccgg ggtcgccctg tggggtggtt
      121 ccattcccgc ggttgcgggt gccgggttta gtgccctcac cctcgcaatc ttgttgggga
      181 tggttttagg caacaccatc tatccgcaca tctggaaaag ctgtgacggt ggtgtgctgt
      241 ttgccaagca atatttatta cgtctgggta tcattcttta tggcttccgt ctgacgttct
      301 cgcaaattgc cgatgtcggt atcagtggga tcatcattga cgtgttgacg ctgtccagta
      361 ccttcctgct ggcttgcttc ctggggcaga aagtgtttgg tctggataag cacaccagct
      421 ggttgatcgg tgccggtagc agtatctgtg gtgctgccgc ggtactggcg actgagccgg
      481 tagtgaaagc ggaagccagt aaagtaaccg tggctgttgc aaccgttgtt atcttcggga
      541 ccgtcgcgat tttcctctac ccggcgatat atccgctgat gtctcaatgg tttagtccgg
      601 aaactttcgg tatctacatt ggttctactg tgcacgaagt ggcgcaggtg gtggcggcag
      661 gtcatgccat cagcccggat gcggaaaacg cagcagttat ttccaaaatg ctgcgcgtga
      721 tgatgctggc tccgttcctc atcctgctgg cggcgcgtgt taaacagctg tctggggcga
      781 acagcggcga gaaaagcaaa atcactattc cgtggtttgc catcttgttc atcgtcgttg
      841 ccatctttaa ctcgttccac ctgttaccgc agagcgtggt gaacatgctg gtaacgctgg
      901 ataccttcct gctggcaatg gcgatggcgg cgctgggtct gaccactcac gtcagcgcgc
      961 tgaaaaaagc cggggcgaaa cctctgctga tggcactggt actgtttgcc tggctgattg
     1021 ttggtggtgg tgcgattaac tatgtgattc aaagcgtcat cgcataaacc actacatctt
     1081 gctcctgtta acccgctatc attaccgttt tcctccagcg ggtttaacag gagtcctcgc
     1141 atgaaataca ttggagcgca cgttagtgct gctggcggtc tggcaaatgc cgcaattcgc
     1201 gccgccgaaa tcgacgcaac cgcgtttgcc ttgttcacca aaaaccaacg tcagtggcgt
     1261 gccgcaccgc tcacgacgca aaccatcgat gaattcaaag cggcctgtga aaaatatcac
     1321 tacacatcgg cgcaaattct tccccacgac agctatctga ttaacctcgg acatccggtc
     1381 actgaagctc tggaaaaatc gcgcgatgcc tttatagatg aaatgcagcg ttgcgaacaa
     1441 ctggggcttt ctttgctcaa cttccaccct ggcagccatc tgatgcagat ttcagaagag
     1501 gattgccttg cgcgtattgc cgaatccatc aacattgcgc tggataaaac tcaaggtgta
     1561 acagcggtga ttgaaaacac cgccggtcag ggcagtaact tagggtttaa attcgaacat
     1621 ctcgcggcga ttatcgacgg cgtggaagat aaatcccgtg tcggcgtctg cattgatacc
     1681 tgccatgctt tcgctgccgg gtatgatttg cgtactccag ccgaatgcga gaaaacgttc
     1741 gcggattttg cccgtattgt tggctttaag tatctgcgcg ggatgcacct taacgatgcg
     1801 aaaagcacct ttggcagccg cgttgaccgc catcatagcc tcggtgaagg caatatcggt
     1861 catgatgcgt tccgctggat catgcaggac gaccgtttcg acggcattcc gctgatcctt
     1921 gaaaccatca acccggatat ctgggcagaa gagatcgcct ggctgaaagc gcaacaaact
     1981 gaaaaagcgg tggcctgatc gatgaacgac agggaaaagc agattcttaa aattttacgg
     2041 cgtaacccgc tgattcaaca gaatgaaatc gccgatattc tgcaaatcag ccgctcacgt
     2101 gttgccgctc atattatgga tttgatgcgc aagggtttga ttaaaggcaa aggatatatc
     2161 cttaccgagc aggattactg tgtggttgtg ggtgcaatca atatggatat tcgcggaatg
     2221 gcggatatcc gttacccgca agcagcctct catccaggtt ctgttcactg ttccgcaggc
     2281 ggcgtcggac gtaatatcgc gcataacctg gctctgcttg gtcgggatgt gcatttaata
     2341 tcagctattg gcaacgattt ttacggcgag acattactgg aagaaacgcg ccgcgcgggc
     2401 gtgaacgttt caaactgcat tcgtctgcat ggacacagca ctgcaactta tctcgctatc
     2461 gctaataagc aggaagaaac tatcctggca atcaatgaca cacatattct gcaacagcta
     2521 acgcctcaac tgctcaatac ttcacgggac ttgattcgcc atgctggtgt ggtgctggct
     2581 gattgtaatc tcacacctga agccctggag tgggtcttta ccattgctga tgaaattccg
     2641 atgtttgtcg ataccgtttc cgaatttaaa gcgaacaaag taaaaaactg gtacagccgg
     2701 atccacactc tgaaaccaac acaaaatgaa ctggaaattt tgtgggggca accgattaaa
     2761 gacgacaacg atcgcatcag agctgtaaat tcgctgcatc aacaaggtgt taaacgcatt
     2821 tttgtttatc tgaaagatga atctgtattt tgcagcgata aggatggaga acaatttttg
     2881 ctgaccgcgc cagcgcatac gacagtagac agttttggtg ctgacgatgg ttttatggcg
     2941 ggcttggtat atagctttct tgaaggatac agtttccgcg acagcgcccg ttttgcggta
     3001 gcctgcgcgg caatttcgcg cgccagcggc agcttaaaca accctaccct gtctgccgat
     3061 aacgcgcttt cattagtgcc aatggtgtaa caatgttgcc ggattcgacg cttgaccgca
     3121 tcttatccgg ctcataaatt gcgcactacg ctaaaccaat aaagaatcct gcaatagtag
     3181 cactcatcag gttagaaagt gtcgccgccg ccagcgcgcg taaaccaagt tgggcgattt
     3241 ccggcgcacg gtgtggcgca accgcagaaa acgcccccac caccaccccg atagaaccaa
     3301 agttagcgaa accgcacaac gcgaaagaaa taatcgccac ggttttagca tccagagtgc
     3361 cacccgtttg cagatatggc gagaaattga gataagcgac aaattcattg atcgccagct
     3421 tctgcccaat caaactcccg gcaagatttg catcactcca gtcaaccccc atcacccacg
     3481 ccaatggggc caacaggtaa cctaaaatgg actccagcga ggcatgtgca aaaccaaacc
     3541 agccgccaac gccgccgata ataccattaa ttaacgcaat gatggcgaca aatgccataa
     3601 caactgtcgc tacaccggcg gcgattttca gcccggtcat tgcccctgtc gcagcggctt
     3661 caataatgct ttttggcggt gtttcggtga aagagaggtt attaaaggaa acctgcgaag
     3721 attccgtagc cgggcttaac aggcgggcaa acaagatccc gcctgggatc gccattaacg
     3781 atgccgccag caaatattcc acaggtacgc ccagggcggc gtaaccaatc attgtcgaac
     3841 cagcaatcga ggccatgcca ctacaaatcg ctgtaaataa ttcattgcga ttcagacgat
     3901 cgataaaggg tttgacgatt gccggaattt cgttttgccc gaggaaaatg gtagtgaccg
     3961 cgacgaatga ctcgatcttg ctgatattta acgctttctg gaagataccg ccgagaatgc
     4021 gaattaaaat ccccatcaca ccgatgtagt agagaatact caccagtgct gtaacgaaga
     4081 taattgccgg taatactctg aaaccaaata taaatcctgc gccatcaaac agcgtgtcca
     4141 ttttcggccc gaccagcgaa ccgaagataa atgcgctacc cgcgtcgctg tacgccatca
     4201 ctttatgcac gccaaaagcg actttttcag cgacccaacg ccctggcggt aaccaaagca
     4261 taatcccgcc aatcacaacc tgtaacacta acgccgcgcc aacggtacgc aggctgatct
     4321 tcttcttgtt tactgacagc aaaaatgcaa ttgccagcaa taccaccatt cccagaacac
     4381 ttctcatgac atccatagtg attatctctt catgtcatat tgggcgacgg ctttctgccc
     4441 atcagaaata gccgggcctg catcttgcgc tatcggcccg gcttgttatc aacgcttaat
     4501 gggttttgat gtagccgcgc acgcactctt cgactaagcc ccagaaccag tcggtatcaa
     4561 tagtgatgcc gactttggta ttggcgggct tgccaagaac gcccagctcg tcgcagacgg
     4621 tgcgcccata gcaagggcca ctgttgacgt ccacttcgac gtacatctcc tgggttttaa
     4681 tgctatcagg gttaatcaga taaccgatgc aggtggcgtc gtgcaccggg ccgccagcca
     4741 ggccgtagtt ttcgaactgc gttttgagag tgaagttcat gatgtcgctg aacagctctc
     4801 cggcagggcc gcctgccctt tccatccgag caatcacgtc cggggtgcaa acggtctggt
     4861 tggtaagatc gaggcccatc atcactaatg gaacgccaga ggtgaacacc acgcgggctg
     4921 cttccgggtc agcaaagatg ttgaactcgg cagatggcgt gaagttgcct gtaccgtaag
     4981 cgccgcccat tagcacaatt tcacggattt tgggcaggat cgcgggctgc atacgcattg
     5041 ccaccgcgat atttgaaagc ggaccaaccg gcaccagagt gatatcgcca tcgcttgcca
     5101 tcagggtatc aatgatgtat ttcaccgcgt gggtactttc tgcctggcgg gtcagcggct
     5161 cgaataccgg gccatccagt ccggtttcac cgtgaatatt atcggcaacg atttgtttac
     5221 gcataatggg ttgcggcatc cccgcataaa ccggaacatt aatctccagt ttctggcaaa
     5281 cattcaggcc attaattaat gttttatcaa gcgtctgatt acccgctaca atagtgatgc
     5341 ctaataaatc tattgccgga tgtttcgctg ccatcatcat tgcaatagca tcatcatgac
     5401 ccggatcaca atccagaata atttttctct tttccattgt ttatttcctc tgtttccagt
     5461 tgcgttattt tttctacagc aaagaaaatt cgaccgggcc gatgattgaa tcttaccaac
     5521 cgcgtacgta tgctaaatat gagaaatctc atagcggata aacatcgtga aagaaatcca
     5581 caataatgat cttaagcagc aattgatgag tgaatccgcg tttaaggatt gctttttaac
     5641 ggatgtttca gccgatacgc ggctgtttca ttttttagcg cgtgactaca ttgtgcagga
     5701 agggcaacag ccgtcctggc tgttttacct gacgcgaggc cgcgccaggc tttacgccac
     5761 gctagctaat ggtcgcgtgt cgctgatcga tttctttgcc gccccctgtt ttattggcga
     5821 gattgagtta atcgacaaag accatgaacc gcgtgcggtg caggctattg aagagtgttg
     5881 gtgccttgcg ctccctatga aacattaccg cccgcggtta ttaaacgaca cgctattttt
     5941 acgaaaactc tgcgtcacct taagtcataa aaattatcgt aatattgttt ctttaactca
     6001 gaatcaatca tttccgttag tgaatcgcct ggcagcattt atattactct cgcaggaagg
     6061 tgatctttat cacgaaaagc atacgcaagc ggcagagtat ttaggcgttt cttatcgaca
     6121 tcttttatat gttctcgcgc aattcattca cgacggttta ttaattaaaa gcaagaaagg
     6181 gtatctaatt aaaaacagaa agcagttgtc aggactggcg ctggagatgg acccggagaa
     6241 taaattctcc gggatgatgc agtaaaaatt atttgcaata gcgcgattgc cggatgcaac
     6301 acttaataag cgcatacatc cggcaatgaa actcaagcta aaccaataaa gaacccggca
     6361 atggtcgcac tcatcaggtt ggaaagcgtt gctgctgcca gcgcccgtaa accaagctgg
     6421 gcgatttccg gcgcgcgttt tggcgaaata gccgaaaatg cgccaacgac aacaccgata
     6481 gaaccaaagt tagcaaaacc acaaagcgca aaggagataa tcgcaatggt tttcacttcc
     6541 agcgtgccgc ccgtttgcag gtatggggag aaactcaggt aagcgacgaa ttcgttaatc
     6601 gccagtttct gcccaatcag gctacccgca agattggcat cactccagtc cacacccatg
     6661 atccacgcca gcggtgccag cacatagcca aaaatacttt ccagagaggc attggcgaaa
     6721 ccaaaccagc caccaattcc gccgataatg ccgttgatca gcgcaataat tgcgacaaac
     6781 gccattacca ccgtcgctac accagcggcg attttcagcc cggtcatcgc accgctcgcc
     6841 gccgcttcga taaagctttt tggcggcgtt tcgctgaacg acagattttc aaatgtgacc
     6901 tgtgaaggct cggtggccgg gctaagaata cgtgcaaaca aaataccacc tgggatcgcc
     6961 atcagcgatg ccgctaacag gtagtcaatt ggtacgccca ttccggcata accaatcatc
     7021 atcgaaccag caatggacgc catcccgcta caaattgcgg taaacaactc gttgcgattc
     7081 atgcgatcga taaacggttt aacgatcgcc gggatctcat tttgcccgag gaaaatagtt
     7141 gtgactgcga caaaagattc gattttgctg atgttaagag ctttctggaa aatgctgcca
     7201 aggatgcgaa tcagcagccc catcacgcca atgtagtaca gcagactgat gagcgcagta
     7261 acgaaaataa tcgccggaag tacgcgaaag gcgaagataa aacccgcacc gtcaaacagg
     7321 acatccattt tcggcccaac cagcgaacca aaaatgaagg cgctaccggc atcactgtaa
     7381 gacatcactt tatgaacgcc taatgccgcc tgttctactg cccactttcc cggtgggaag
     7441 tagagcatga tgccaccaat agcgatttgc agcagcagtg cggctccaac cgtgcgcaaa
     7501 ctgatgctct ttttattcac tgacaacaga aatgctattg ccagtaacac caccatcccc
     7561 acaacacttc tcattatatc cataatgatt ttcccttcat gccagtaaac ccggcgtcag
     7621 cgccaggttt tggtatgctt gatgagtacg ggcgacggct ttctgcccgt cagaaattaa
     7681 cccgcgagac gctggtattc tttggcaatt tcactcgcca gaatggcgtt gttgaacacc
     7741 agctggatat tggatttcag gctgtcaccg ccggtcagct cagcaacgcg cgccagcagg
     7801 aacggtgtac tttctttacc aataacgccc tgctcttcgg cttcggcgac ggcttgatct
     7861 atggctgcat tgatagattc ctccggcatc gcaaactgtt ccgggatcgg attcgccact
     7921 accaggccgc cgttcaaacc ggtttgccat ttcactgcca ttgcacgagc gatttccgtg
     7981 gcactatcaa ggcgaatact gacttcaaat gggctggtac ggcagaaaaa cgcaggcagc
     8041 gcttttgtct gatagccaat taacggcaca ccgaaggttt ctaaatattc tgttgttaat
     8101 cctaaatcga gaatagattt cgccccggca caaacaacgg tgacattagt atttgccagt
     8161 tcttgcaaat cggcagaaat atcgaaggta tgttccgccc cgcgatgcac accaccaatt
     8221 cccccggtgg caaatacttt aattccggca agcgccgcaa taatcatcgt tgaagccaca
     8281 gtggttgcgc cattttttcc ggcggcaaca acaaaaggta aatcgcgacg actaactttg
     8341 gtcacgttat gcccttcacg acccagtaat tcaatttctt ctttgcttaa acccactttc
     8401 atcacgccgc caataatggc gatagtggca ggtactgcgc cctgtttacg aatagtttct
     8461 tctacttcaa ttgcggtctg ggcattttgt gggaacggca tcccgtgaga aataatggtc
     8521 gattccagcg ccacaaccgg ttttttgttt tttaaagcgt cctgcacttc cggggaaatt
     8581 tgtaataatt caggggaaat ttttaattca gacattctgc gttctccact aacgatataa
     8641 cgttggcaat cgataaatcg gggttattgg tgtattcaca ggagagcgcc attgacgaac
     8701 atccctgtgc gaaacgaaca gattcggcaa acggcattcc gtctacccaa cacgaagcaa
     8761 gtcccgccat catggcatcg cccgctccgg taacattaat aacattggtt ttgatcgggg
     8821 cagaccagcc actttcaccg ctgatatcac tgtaataaac gccatcgccg cccatgctca
     8881 ataccagtcg gttcaggcca tgttgatgga accaggcaac aacttttgcc acatcttcac
     8941 gccctgacag cgcaatccca ctcagtgttt ccgcttcaag gcggtttggc ttcagagtgt
     9001 ggatctgatt tagacggtcg cgcactttga cacatttcca cgctgaaacc ggatcgacaa
     9061 atacgggtac gttggcggca ttatccagaa tccatgccag tgcctcttca ctgatattac
     9121 agtctgcgac aatgaccttt gccctctgaa taaattcacg gtgctgtgcg agatattcag
     9181 ctgtaatagc gttgctaata ttcatgtcat ttatagcaac cagcatttca ccggtattat
     9241 cgagtaatga taaataacta gacgtatttt ctcccggcac aatcaggcat ttatcgacat
     9301 aaacgccaga ttgattggtt tgcgttagca gcgattgacc ataaaaatca ctgcctactg
     9361 cgctcagtag ccaggctttg ttacccagca acgccaggtt ttgtgcaata ttgcgcccta
     9421 ctccaccagg cgtaaatttt attttacctg gatttgaatc cgcataattt aatgattcat
     9481 gtgaatatcc ggcgacatca atattcgccg aacctataat tacgacataa tccttttcgc
     9541 gcatagcacg tcctctggta aaaaattacc aaccctgtca atccacaaga atatagatac
     9601 tgcaaagacg gtttaaacat gtgttcatat ttaaacatgt gctcatagta tgcatgtttt
     9661 acgtaaagta aattaccgcc agagaggcaa aatgggcaga tttgagcagg ctcacaaaat
     9721 gcgattaaat gcctgaatta caaaagcgag gaatttgtga cgggatgcac agaacaggaa
     9781 cactaaaaaa gggcagaaaa taatctgccc ttgaggaaat aaccttagtg tttgatgaac
     9841 gtttcaggtt tctactgaaa gataaaacca tttaaattca taaaattaca tttacaaacc
     9901 ggtcattccc tttgcgctca tccaatgata cagggcagga aatttctgcc ctgtaacaca
     9961 ccttttatta cgctgctttc gctactgcgt ccacttccgg acgtttcagg aaggcatagg
    10021 ccaaacccgc caccagcgta ccggcaataa ttgctaccag gtaacccaat accggcgtaa
    10081 tagcgccagg gatcagcaga acaaacagac caccgtgcgg tgccatcagt ttcgcaccaa
    10141 tcgccattga gattgcgcca gtcagcgccc cacccacgat acagcacggc agcacacgca
    10201 tcggatcacg agcagcaaac ggaattgcac cttccgaaat aaagcacagt cccagtacca
    10261 gagcggcttt gccaccttcc tgctgcgctt tgtcgaattt gcgacgcgcc accattgttg
    10321 ccaggcccat tgccagcggt ggcaccatac ctgccgccat aatcgccgcc atcgggccat
    10381 aggtttgagt actcagcaga cccacaccga atgcgtacgc tgctttattt accggaccgc
    10441 ccatgtcagt acacatcatg ccaccgagga tcgcccccag cagaaccgca ttcgcagtcc
    10501 ccatggtctg cagccagtga gtcaaccctt cgagaatgcc agcaaccggt ttaccgatca
    10561 ggtagatcat cgccagaccg accaccagac tggaaattag cggaatgatc aggatcggtt
    10621 tcagcgcctc catactctgt ggcagtttca attgcgtact gattaacttc gcaatgtaac
    10681 cagccaggaa gcccgcaata ataccaccaa tgaagccaga accggtgctg accgccagca
    10741 taccgccaat cagacccggc gtgaggcccg gacgatcggc aatggaaaag gcaatataac
    10801 ctgccagtac cggtaccatc agcgcaaagg ctgaaccacc accaatctgc atcagcgccg
    10861 ctgccaacgt acccggctct ttaaacgctt cgataccaaa agcaaaagaa agcgcgatac
    10921 acagaccacc agcaacgacc atcggcagca tgtaagagac gcccgttagc aagtgacgat
    10981 aagcgcctgc actctctttc ttaccttcag tggtcgccgt ttgagttttg cccgccggtt
    11041 catacggcgt tgcttcagca accgctttat ccagttcctg cgcggttttc ttcagcgcca
    11101 gaccggtaga ggtacgatac atcggtttac cagcaaattt cgccagatcc acttcgatat
    11161 ctgccgccac aatcaccaga tccgctgcgg ctacttcctc gggagtgatt gcattacccg
    11221 cgccaacaga accacgggtt tcaactttca cccaccagcc acgttttttc gcttcggttt
    11281 caatggcttc agccgccata aaggtgtgtg ctacgccagt cgggcaagca gtcaccgcaa
    11341 ctacgcgttt cggaccgctg gcggcaaccg gtgctgtcgc agtgaccggc gcagtgtaag
    11401 gtttcgcatg gcctttggct tcactcagga acagctcagg gtgcgcaact gcccgggaaa
    11461 tatcgccctg ccagacattt ttaccgttca gcgcgctgtc gttcgggatg gaatcaccga
    11521 gaacaatcgc catttcagcg tcgttcggat tgtcgatgat ttccagtttt gcttttcgcg
    11581 ccgccgcgcc cagcagggtc ttcgccatat aggcgcgtgc ctgaccgaga ttagcgtcaa
    11641 taatcagcag cgttttcatt atgcctctcc tgctgtcagt taaaaggttg taagtcgacg
    11701 cgcgccatca ttgcggccaa ctgcggacga tcggtaatac ccacattgct ttgacttacc
    11761 gccagggctg caacagcagt cgccagacgc agtgtgtgtt cactggattc acgcatcagc
    11821 aagccataaa tcaggccacc aaccatagaa tcccctgcgc caacggtgct tacgacatcg
    11881 actgacggtg gtttggcgat ccattcgccg gaggcattaa cccaaagcgc gccttcggca
    11941 cccagtgaaa taacaacatg cgcaatacct tgttcacgta gcgcatgtgc agcttcaatc
    12001 acatctttca tttcaggcag tttacggcct gcccagattt ccagctcgcg gcggttaggt
    12061 ttcaccagcc acggtgccgc tttcaaacct gctactaacg cttcacggct actatcaaag
    12121 ataatgcaag gacactgact acgcaggcga gtcatccagt cggtgaacgc ttccgggctg
    12181 acgcctgacg gtaagcttcc gctgacacag accatatcga actgaccgag ccagctcaga
    12241 gaatcagtca caaagcgttc ccagtcggcg ggggtgactt caaaacccga gaagttgaag
    12301 tcggtcactt cgccgtcttt ttccgtcagc ttaacgttaa ttcgggtgcg cccctgtaca
    12361 acctggaaac ggttggcaat gcccagctcg ctgaacagtt gctgaaaacc atcctgattg
    12421 tctttaccga ggaagccgcc aacggtgaca tcaattccca ggtcttttaa tactttggcc
    12481 acgttgatgc ctttacccgc cgcatgcaga ccggtggttt tcaccaggtt cacttcgccg
    12541 cgttcaattt ccgggcagaa accaacaagg tcataagccg gattaagggt gatcgtagca
    12601 acacgtctgc tcattatgcg ccctccccaa gaccagcagc gatagcgtcg ccaatggctt
    12661 tcagcgcctg ttcagcatct gcaccctggg cggtaaagcg taggcgatga cctttcttaa
    12721 cgccaagtgc cacaactttc atcagactac gtccgtttgc cggtttgccg gtgccatcaa
    12781 ggtttgtcac ggtaatatca ctgttaaatt gtttaatggt attgaccagc atggtacctg
    12841 gacgagcatg caggccgtgt tcattgcgca ccacaaactc cgcgcttaac acgtcgtcgg
    12901 tcggcgcatc atcgctggtc agcagcgcca gcaacgttgc cgcatccgct ttcagcaagc
    12961 gatcagcttt attgtcgagc aacaaatcag cgagacgctt aagaaccgcg atgggctgat
    13021 cgtcattcat cgccacactc accagcatgg ctgccgtttc gccgtccaca tcaaaagcat
    13081 ttgccgcacg gcttaccgca atcgcgctac gcagattgcc ttcggcgcta tcgcacagcc
    13141 agataccctg tccgaggttc agcggttgtt cattgatggc tttggtgacg aaagtggcgt
    13201 caactgcccc cgcctctttc agacgcgcag cgttcagcgc ctgaagagtc agcagatcgc
    13261 tggcgacgat atccagcgtc agcatttcgt tgtcgagctt cagctgctca ctctgctttt
    13321 cgcccatcag taatgcgcga agttcttctg ctgttgttgc tgacttcagt tgttcagcaa
    13381 cggaatcatc gctcagtacg tgggtcagct ggcgtagcag gcccagatgt tcatccgagc
    13441 tggcagcaat accgattgcc acgtacgcta cctgaccgtc accccaggtg acgccttccg
    13501 ggaactgaaa tacctgaacg ccggttttca gcacctgatc gcgggtgtcg gtagtgccgt
    13561 gtggaatagc aataccattg ccgaggaacg ttgaggtttg ctgttcgcgc gccagcatgc
    13621 cattgacgta gccttctgct acattaccgg cctgcaccag cgccgcagcg acctggcgaa
    13681 tcgcctcttc tttgtctccg gccttttcgc ccggatggat gtcctgtacg gataactgga
    13741 acatagttct cctctcttgc tgaattgaaa cgattcagcc tctatgagaa aaaaagcgcc
    13801 aacctggctt agggttaaag acaagatcgc gctgaaacgt ttcaagaaag cataatactt
    13861 ctgtttcagc acgcaaggaa agccgtaaag ttatgagcaa aagtttgatg tgctgcacaa
    13921 ttttttgcca tttttcctaa ttgctgatgg gaaaatccgt tatcagcaat ttcatttcag
    13981 cagcgtcagc agccaatcag caacagtgaa atggcatttt gattattcgt ggcgcttttg
    14041 atttcgctgt ctgtttattt tctgacaagc agcgtaaact ccgcgtcttc ctcttccagt
    14101 gatcgaccag catgcataac tcccccgcag tctccagcgc gaaatcgttt gacctgacct
    14161 cgacggcgtt tttaatcgtt gcctttctca ccggtattgc gggcgctctg caaaccccga
    14221 cactcagtat ttttcttact gatgaagtac atgctcgtcc ggcgatggtg ggattcttct
    14281 ttaccggcag cgctgtcatt gggattctgg taagtcagtt tctcgccggg cgctctgata
    14341 agcgcggcga tcgcaaatcg ctgattgtct tttgctgcct gttaggcgtg ctggcctgca
    14401 ccctttttgc ctggaatcgc aactactttg ttttgctatt cgttggcgtc tttcttagca
    14461 gctttggctc gaccgctaac ccgcaaatgt ttgcccttgc ccgtgaacat gccgacaaaa
    14521 ccggacgtga ggcggtgatg ttcagctctt ttttacgcgc tcaggtttca ctggcatggg
    14581 tcattggccc accgctggct tatgccttag cgatgggttt cagctttacg gtaatgtatc
    14641 tgagcgcagc ggtagcgttt attgtttgcg gtgtgatggt gtggctgttt ttaccgtcga
    14701 tgcaaaaaga gcttccgctg gcgaccggca cgatcgaagc gccgcgccgt aaccgtcgcg
    14761 atacgctgct gctgtttgtc atttgtacat tgatgtgggg ctcgaacagc ctgtacatca
    14821 tcaacatgcc gctatttatt atcaacgaac tgcatcttcc cgagaaactg gccggtgtga
    14881 tgatggggac cgccgccggg ctggaaatcc cgacgatgtt gattgccgga tatttcgcca
    14941 aacgtctggg taagcgtttc ttaatgcgcg ttgctgccgt gggtggcgtc tgtttttacg
    15001 caggaatgct gatggcgcat tcacctgtca ttctgttggg cttgcagctg ctaaatgcta
    15061 tttttattgg cattctgggc ggcatcggga tgctctattt tcaggatctg atgcccggtc
    15121 aggcgggttc agccaccacg ctctatacca acacgtcgcg cgtgggctgg atcatcgcag
    15181 gatcagtggc gggcatcgtc gccgagatct ggaattatca cgctgtgttc tggtttgcga
    15241 tggtgatgat tatcgccact ctgttttgct tactgcggat taaagatgtt taaggcgcgg
    15301 tcagcatttc cagatcgata agccaggtca tggcctgctg acgcgagtta ccgcacattt
    15361 cagcgctggc ttgtaagcct gcacagactt tcggtcgcag tggcgaggtg aaaattttac
    15421 agcgttgctg ttcatcaagc tgaatgcagg gcgtattggc gggcttgcca tctggcatac
    15481 cgggaatagg gctggaaatt gaaggggcag tgcaacacgc cccgcaaccc ggacggcatt
    15541 tcatacgttg ttctcttaag gttaaccacc ggattgatga gcgcgcacag taccaccttt
    15601 tttgcaccag caaaagtgcg aataccactt gcccgaaagg cccgtcgcga gtactttgtc
    15661 gcgatatttt tgacattttc gactacagga atttttcgat gccaagagcg aacgaaatta
    15721 aaaaaggtat ggtactgaat tacaacggca aactgctgct ggttaaggat attgatattc
    15781 agtcgcccac tgcccgcggt gccgctacgc tgtacaaaat gcgtttttct gatgtccgta
    15841 ccgggctgaa agtagaagag cgtttcaaag gtgatgatat cgttgacacc gtgacgctga
    15901 cccgccgtta cgttgacttc tcctatgtcg atggcaacga atatgtcttt atggataaag
    15961 aagactatac cccgtatacc ttcaccaaag atcagattga agaagagttg ctgtttatgc
    16021 cagagggcgg catgccggac atgcaggtgc tgacctggga cggtcaactg ctggcgcttg
    16081 agctgccgca gaccgttgat ctggaaatcg ttgaaaccgc accaggcatc aaaggggcat
    16141 ctgccagcgc ccgtaacaaa ccggcgacat tgagcactgg tctggtgatt caggtaccag
    16201 aatacttaag cccgggcgaa aaaattcgta tccatatcga agaacgccgt tatatggggc
    16261 gtgctgacta acttcagccg catgcagaaa agggatagct caggctgtcc cttttttaat
    16321 ttattatacc aatcttctat tttgcgcttc ctgaacacct tacgccctca attttcactc
    16381 gttgattgat cgccctcaca cttcatcgca ttaacaatcc agaccaattt caattgctgt
    16441 catataactt tacactgtca ttgttaattt atcgttacta agacgtgact cctatgaaga
    16501 caattgcctc cgttacgctc ccgcatcatg tacacgctcc acgctacgat cgccagcagt
    16561 tgcaatcacg tatcgttcat tttggctttg gcgcctttca ccgcgctcat caggcgttac
    16621 tgaccgatcg tgtgctgaat gcccagggcg gcgactgggg gatctgtgaa atcagcttgt
    16681 tcagcggtga tcaactgatg agccagctcc gcgcacagaa ccatttatat accgtgctgg
    16741 aaaaaggtgc ggacggcaat caggtgataa ttgtcggtgc cgttcacgaa tgccttaatg
    16801 caaaactgga ttccttagcg gcaattattg agaaattttg cgagccacag gtggcaattg
    16861 tttccctgac gattaccgaa aaaggctatt gtattgaccc ggccaccggt gcactcgaca
    16921 ccagtaatcc gcggattatt cacgatctac aaacccctga agaacctcac tccgcaccgg
    16981 gtattctcgt cgaagcactg aaacgccgcc gtgagcgcgg ccttacaccg tttaccgtgc
    17041 tctcctgcga caatattccc gacaatggcc atgtggtgaa aaacgcggtg ctgggaatgg
    17101 cagaaaaacg ttcgccagaa ctcgccgggt ggataaaaga acacgtcagt tttccgggaa
    17161 ccatggtcga ccgcattgtt ccggctgcaa ccgacgaatc actggcagaa atcagccagc
    17221 atctgggggt aaatgatccc tgcgcgatta gctgcgaacc gtttatccag tgggtggtgg
    17281 aagataactt cgtcgctggg cgtcctgcct gggaagtcgc aggtgtacaa atggtgaatg
    17341 atgtcctgcc atgggaagag atgaaactgc gtatgcttaa tggcagccac tcttttctcg
    17401 cttatctggg ttacctttca ggattcgccc atatcagtga ttgcatgcag gatcgcgcat
    17461 ttcgccatgc cgccagaaca ttaatgctga atgagcaagc gccgacacta caaattaaag
    17521 atgtcgattt aacacaatat gcggacaagt taattgcacg ttttgctaat ccggcgctga
    17581 aacataagac ctggcaaatc gcaatggatg gtagccagaa attaccgcaa cgtatgctgg
    17641 caggtattcg catacatctg gggtgcgaaa cggactggtc gttgctggca ttaggcgttg
    17701 ctggctggat gcgttacgtc agcggcgttg atgatgccgg aaatgccatt gatgttcgcg
    17761 atccgcttag cgataaaatt cgcgaacttg ttgcgggcag cagcagtgaa caacgcgtaa
    17821 ccgccctgct ttccctgcgt gaagttttcg gtgatgatct gccagataac ccgcattttg
    17881 tgcaggccat cgaacaagcc tggcaacaaa tcgtacaatt cggcgcacat caggcgctat
    17941 taaacaccct caaaatttaa cgatttctgc ggttaaagcg gatgaagctc accttcgtcc
    18001 gctctcccct tctcttttct gcctttttta gccaggatta acgctcagtt aacttaccag
    18061 agtattgcgg agccgttgtg accaggacca acctcatcac cggttttctc ggcagcggga
    18121 aaaccacgtc gattcttcat ctgttagccc ataaagatcc caacgaaaaa tgggcggtac
    18181 tggttaatga atttggggaa gtcggaattg atggtgcttt gctcgccgat agcggcgcat
    18241 tgctgaaaga gatccccggc ggctgcatgt gctgcgttaa tggtttaccc atgcaggtag
    18301 ggttgaatac cttactgcgt cagggaaaac cagaccgctt gttgatagag ccgaccgggc
    18361 tgggccatcc gaaacagatc ctcgatctct taaccgcacc agtctatgaa ccgtggatag
    18421 atctgcgcgc caccttgtgc attctcgatc cgcgcttgct gctggacgaa aaaagcgcca
    18481 gcaacgaaaa cttccgtgac cagctggctg ccgcagacat cattgtcgcc aataaatccg
    18541 accgtgcgac gcccgaaagt gagcaagcgc tacagcgttg gtggcagcaa aatggtggcg
    18601 atcgacaatt aattcacagt gagcatggga aagttgacgg tcatcttctg gatttgccgc
    18661 gtcgcaattt agccgagttg cccgccagcg ccgcgcattc tcatcagcat gtcgtgaaaa
    18721 aagggttagc agcgttaagc ctgccagagc atcaacgctg gcgtcgcagt ctgaacagcg
    18781 ggcaaggata tcaggcctgc ggctggatat tcgacgctga tacggtattc gacaccattg
    18841 gcattctgga atgggcgcga cttgcaccgg tggaacgcgt caaaggcgtg ctgcgtattc
    18901 ccgaagggct ggtacgaatc aaccgtcagg gcgatgacct gcacattgaa acgcaaaacg
    18961 ttgcgccacc ggacagtcgt attgagctga tttccagcag cgaagctgac tggaatgctt
    19021 tgcagagcgc gctgttgaag cttcgtttag cgactaccgc gtaaggttgc ctgcgttttt
    19081 cagtaagata attagagaaa atatgattaa aaatttgccg caaatagtgt tgttgaatat
    19141 tgtcggcctc gcgctgtttc tttcctggta tattcccgtt aatcatggat tctggttgcc
    19201 gattgatgcg gatatttttt atttctttaa tcagaaactg gtcgaaagta aggccttttt
    19261 gtggctggtt gcattgacca acaatcgcgc cttcgacggt tgttcactgc tggcgatggg
    19321 tatgttgatg ctgagtttct ggctgaaaga aaacgcccca ggcagacgac gtatcgtgat
    19381 tattggtctg gtcatgctat taactgcagt ggtattaaac cagctgggtc aggcattaat
    19441 tcctgtaaaa cgggccagcc caacattgac ttttaccgac attaaccgcg tcagcgaact
    19501 gctctctgtt cccacgaaag atgcctcacg agatagcttt cccggcgatc acggcatgat
    19561 gctgcttatt ttttcggcat tcatgtggcg ttatttcggc aaagttgcag gtcttatcgc
    19621 ccttattatt tttgtggttt ttgcgtttcc cagagtaatg attggcgcac actggtttac
    19681 tgacatcatt gtcggttcga tgaccgtgat attgatcggt ttgccctggg tgttgctgac
    19741 gccattaagt gatcgattaa tcaccttttt tgacaaatca ctaccgggaa aaaacaaaca
    19801 tttccaaaac aaataactca cagtaattaa catcatcagg cttattttta tagtgaggat
    19861 aatcctgatg atgcgcaccg tgctttcatc catcgcgcgc aaaaatcatt ctctaagtaa
    19921 atgaatggat tgcatgcgtt tcactcaatc gtactttaat tgaccaatcc cgcttattaa
    19981 ctttctgtat cactttttct tataaaaaat catgtaaaac cgctcgccaa gaccgcacca
    20041 atcgggtaat ctcgaactcg ttttgcctcg gcggtagatt atcctcacag catataattt
    20101 tgtgcgttag tccacagatt tggccttaag gaattgtttc aacatgccca ggtaattagt
    20161 ctcgtgtcgc ttggcatttt tttataacga tatttgtcgt taaggacttc aagggaaaac
    20221 aaacaacatg gtcaaatctc aaccgatttt gagatatatc ttgcgcggga ttcccgcgat
    20281 tgcagtagcg gttctgcttt ctgcatgtag tgcaaataac accgcaaaga atatgcatcc
    20341 tgagacacgt gcagtgggta gtgaaacatc atcactgcaa gcttctcagg atgaatttga
    20401 aaacctggtt cgtaatgtcg acgtaaaatc gcgaattatg gatcagtatg ctgactggaa
    20461 aggcgtacgt tatcgtctgg gcggcagcac taaaaaaggt atcgattgtt ctggtttcgt
    20521 acagcgtaca ttccgtgagc aatttggctt agaacttccg cgttcgactt acgaacagca
    20581 ggaaatgggt aaatctgttt cccgcagtaa tttgcgtacg ggtgatttag ttctgttccg
    20641 tgccggttca acgggacgcc atgtcggtat ttatatcggc aacaatcagt ttgtccatgc
    20701 ttccaccagc agtggtgtta ttatttccag catgaatgaa ccgtactgga agaagcgtta
    20761 caacgaagca cgccgggttc tcagccgcag ctaataaacc gtttggatgc aatcccttgg
    20821 ctatcctaac gagttaactg aaagcactgc ttaggcagtg cttttttgtt ttcattcatc
    20881 agagaaaatg atgtttccgc gtcttgatcc aggctatagt ccggtcattg ttatctttta
    20941 aatgttgtcg taatttcagg aaattaacgg aatcatgttc atacgcgctc ccaattctgg
    21001 acgtaagctc ctgcttacct gcattgttgc aggcgtgatg attgcgatac tggtgagttg
    21061 ccttcagttt ttagtggcct ggcataagca cgaagtcaaa tacgacacac tgattaccga
    21121 cgtacaaaag tatctcgata cctattttgc cgacctgaaa tccactactg accggctcca
    21181 gccgctgacc ttagatacct gccagcaggc taaccccgaa ctgaccgccc gcgcggcgtt
    21241 tagcatgaat gtccgtacgt ttgtgctggt gaaagataaa aaaacattct gttcatctgc
    21301 gaccggtgag atggacattc cactcaatga attgattccg gcgctcgaca ttaataaaaa
    21361 tgtcgatatg gcgatcttac ccggcacgcc gatggtgccg aacaaacccg caatcgtcat
    21421 ctggtatcgc aaccctttgc tgaaaaatag cggcgtcttt gccgctctga atctcaacct
    21481 gacgccttca ctcttttata gttcacggca ggaagattac gatggcgtcg ccctcattat
    21541 tggcaatact gcgctatcta ccttttcttc acgtttgatg aacgttaacg aattaaccga
    21601 catgccagtc cgtgaaacta aaattgcggg cattcctctg accgttcggc tttatgcaga
    21661 tgactggaca tggaacgatg tgtggtacgc atttttactg ggcggcatga gtggaactgt
    21721 cgttggcctg ctctgctatt acctgatgag cgtacgtatg cgccccggca gagaaatcat
    21781 gaccgccatc aagcgcgaac aattttacgt ggcgtatcaa ccggtggtgg atacacaagc
    21841 tttgcgagta acgggcctgg aagtactgct acgctggcgg catcctgtcg cgggagaaat
    21901 tcccccggat gccttcatta actttgccga atcgcaaaag atgattgtgc cgctgactca
    21961 gcatctgttt gagttaattg cccgcgatgc cgcagaatta gaaaaagtgc tgccggtagg
    22021 cgtcaaattt ggcattaaca ttgcgccgga ccatctgcac agcgaaagct ttaaagcaga
    22081 tatccagaaa ctgctcactt ccctacccgc acaccatttc cagattgtgc tggaaattac
    22141 cgagcgcgat atgctgaaag agcaagaagc cacacaactc ttcgcctggc tgcactcggt
    22201 aggcgtagaa attgctattg atgacttcgg caccgggcac agcgcgctta tctatcttga
    22261 gcgttttacg ctcgattatc tgaaaattga ccgtggattt atcaacgcca tcggtacgga
    22321 aacgatcact tcacccgtac ttgacgcggt gctgacgctg gcgaaacgcc tcaatatgct
    22381 gacggttgct gaaggggtcg aaacgccgga acaggcgcga tggctaagcg aacgcggcgt
    22441 taatttcatg caaggctact ggattagtcg cccgttaccg ctggacgatt ttgttcgctg
    22501 gctaaagaaa ccgtatacgc cgcagtggta aggtgtgctt acgtccctta ttattcatag
    22561 tgaaagcatg ccggattgcg gctaatgatg agtaaaagga aatccgttgc agatgattgt
    22621 gcgcatactg ctgctgttta tcgctctgtt cacctttggt gcgcaggcgc aggctatcaa
    22681 ggaaagctat gcctttgccg tgctgggcga accccggtac gcgtttaatt tcaaccattt
    22741 tgattatgtg aaccccgccg cgccaaaagg tgggcagata acgttgtcag ccctcggtac
    22801 cttcgataat ttcaaccgct atgcactgcg cggcaacccg ggcgcacgca ccgagcagct
    22861 gtacgacacg ctatttacga cttccgatga cgaaccaggc agttattacc cgctgattgc
    22921 tgaaagcgca cgctatgctg acgattattc ctgggtggag gtcgctatta atccgcgcgc
    22981 ccgttttcat gatggttcgc ccattactgc ccgcgatgta gagtttactt ttcaaaaatt
    23041 tatgaccgaa ggcgtgccgc aatttcgtct ggtctacaaa ggcaccaccg tcaaagccat
    23101 tgcgccgtta accgtgcgca ttgagttagc taaacccggc aaagaagata tgttgagtct
    23161 gttttcgctg ccggtatttc cagaaaagta ctggaaggat cacaaactta gcgatccgct
    23221 cgccacgcct ccgcttgcca gtggtccgta ccgaattacg tcctggaaaa tggggcaaaa
    23281 tattgtctat tcccgcgtga aagattactg ggcagcaaac ttaccggtaa accgtggacg
    23341 ctggaatttc gacaccattc gctacgatta ttacctcgat gataatgtcg cctttgaagc
    23401 gtttaaagca ggtgcctttg atttgcgtat ggaaaacgac gctaaaaact gggccacgcg
    23461 ttataccggt aaaaatttcg ataaaaaata catcatcaaa gatgagcaaa agaacgaatc
    23521 agcccaggat acgcgctggc tggcgtttaa tatccaacgt ccggtattca gcgatcgccg
    23581 ggtccgggaa gcaatcaccc tcgcctttga ctttgaatgg atgaacaagg cgttgtttta
    23641 caatgcctgg agtcgcacga acagttattt tcagaatacc gaatacgcgg ccagaaatta
    23701 ccccgaagcc gcggagctgg tgcttctggc accaatgaaa aaagatctac cgtcagaagt
    23761 cttcacacaa atctaccagc cgccggtatc taaaggcgat ggctacgatc gtgacaacct
    23821 gttaaaagcc gacaaacttc tcaacgaagc gggctgggtg ctgaagggtc agcaacgcgt
    23881 taatgccaca acgggtcagc cactcagctt tgaattattg cttcccgcaa gcagcaatag
    23941 tcagtgggta ttgccgttcc agcacagcct gcaacggctg ggtatcaaca tggacattcg
    24001 caaggtggat aactcgcaaa tcaccaaccg catgcgcagt cgcgactatg acatgatgcc
    24061 gcgcgtatgg cgggcgatgc cgtggcccag ttccgattta cagatttcct ggtcatcgga
    24121 atatatcaat tccacttata atgcccccgg cgtgcaaagt ccggttatcg actcgctgat
    24181 caatcaaatt attgccgcgc agggaaataa agaaaaatta ctgccgttag ggcgagcact
    24241 ggatcgcgta ttaacgtgga attattacat gctgccaatg tggtacatgg cggaagaccg
    24301 tctcgcctgg tgggataaat tctcccaacc cgctgtacgc cctgtttaca gcctgggtat
    24361 cgatacctgg tggtatgacg ttaataaagc ggccaaactg ccgtcagcca gacaacaggg
    24421 agagtagatg ggcgcttatc tgattcgccg tctgttgctg gtgatcccaa cgttatgggc
    24481 gattatcact atcaactttt tcatcgtgca aattgcgcct ggcggtccgg tcgaccaggc
    24541 catcgccgcc attgagtttg gtaatgccgg agtattaccc ggcgcaggcg gtgaaggtat
    24601 tcgcgccagc catgcgcaaa cgggcgtcgg caatatcagc gacagtaatt accgtggcgg
    24661 acgcggatta gatccagaag tgatcgccga gatcactcat cgctacggtt tcgataagcc
    24721 gatccacgaa cgttacttca aaatgctctg ggactacatc cgctttgatt ttggtgatag
    24781 cctttttcgc agcgcctcgg tgctgacgct gattaaagac agtctgccgg tttccatcac
    24841 cctcggattg tggagcacgc tgattatcta tctggtgtcg attccgttag gcattcgcaa
    24901 agctgtttat aatgggagcc gctttgacgt ctggagtagc gcatttatca tcatcggcta
    24961 cgccattccg gcctttttgt ttgccatcct gctgattgtc ttcttcgcgg gcggcagcta
    25021 tttcgacctg ttccctctac gcggcctggt ttccgctaac tttgattcgc tgccgtggta
    25081 tcagaaaatc accgattatc tgtggcatat cacgctgccg gtgctggcga cagtgattgg
    25141 tggctttgcg gcgctgacca tgctgaccaa aaactcattc cttgatgaag tgcgcaagca
    25201 atacgtggtg accgcgcgtg cgaaaggggt aagtgaaaaa aatattctct ggaaacatgt
    25261 gttccgcaac gccatgctgc tggtgattgc cggttttccg gcgacgttta tcagcatgtt
    25321 ttttaccggc tcgctgctga ttgaagtgat gttttcactc aatggccttg gcttactggg
    25381 ctacgaagcg accgtctcgc gcgattatcc tgtaatgttt ggtaccttgt atattttcac
    25441 cctgattggc ctgctgctga atattgtcag tgatatcagc tatacgctgg tcgatccgcg
    25501 tatagatttt gagggacgtt aatgtcgcga ctcagccccg tcaatcaggc ccgttgggcg
    25561 cgttttcgcc ataaccgtcg cggctactgg tcgttatgga ttttcctcgt tttgtttggt
    25621 ttgagtttgt gttctgaact tatcgccaac gataaaccgt tgctggtgcg ttatgacggc
    25681 agttggtatt tcccgttgtt gaaaaactac agcgaaagcg attttggcgg cccgctggca
    25741 agtcaggctg attatcagga cccgtggctg aaacaacggc tggaaaataa cggctgggta
    25801 ctgtgggcac cgattcgctt tggtgctacc agtatcaact ttgctaccga taagcccttc
    25861 ccttctccac cctcccggca aaactggctg ggaacggatg ccaacggcgg cgatgtgctg
    25921 gcacgcattc tctatggcac gcggatctcg gttctgtttg gcctgatgct gactctctgt
    25981 tccagcgtga tgggcgtgct ggcgggggcg ctacaaggct attacggcgg taaagtcgat
    26041 ctctggggac aacgctttat tgaagtatgg tcggggatgc cgacgctgtt tttgattatt
    26101 ttactttcca gcgtcgtaca gcctaacttc tggtggctgc tggcaattac tgtcttgttt
    26161 ggctggatga gtctggtcgg cgtggtgcgg gcggagtttt tacgtactcg taatttcgac
    26221 tacattcgtg cggcacaggc gcttggcgtc agcgatcgca gtatcatcct gcgtcatatg
    26281 ttgcctaatg ccatggtcgc gaccctcacc tttttaccgt ttattttatg tagttcgata
    26341 accaccctga cctcgctcga tttcctcggc ttcggtctac cgctcggttc accgtcactc
    26401 ggtgaactgc tgttacaagg gaaaaataac cttcaggccc cgtggcttgg gatcaccgcc
    26461 ttcttgtcgg tggcgatatt attgtctttg ctgatcttta ttggtgaagc cgtccgcgac
    26521 gcatttgatc ctaataaggc ggtgtagcat gacgcaaact ctgttagcga ttgaaaattt
    26581 gtcggtgggt tttcgccatc agcaaaccgt acgtacagta gtcaatgatg tttcactaca
    26641 gattgaggct ggcgaaacgc tggcgctggt gggtgagtca ggttcaggca aaagcgttac
    26701 cgcgctgtca attttacgcc tgctcccttc cccgccggtt gaatatctct ccggcgatat
    26761 tcgttttcat ggcgaatcgc tgcttcatgt cagcgatcaa acgttgcgcg gtgtacgcgg
    26821 taataagatc gccatgattt ttcaggaacc gatggtgtcg ttaaatccat tgcataccct
    26881 ggaaaaacag ctttatgaag tgctttcact ccaccgcggg atgcgtcggg aagcggctcg
    26941 tggcgaaatt cttaactgcc ttgatcgcgt tggtatccgc caggcggcaa aacggctgac
    27001 agattatccg catcagctct ccggcggcga acgccagcgg gtgatgattg cgatggcgct
    27061 gttaacgcga ccggaattat taattgccga tgaaccgacc accgcactgg acgtctctgt
    27121 ccaggcgcag attttacagc tgttgcgcga actgcaaggc gagctgaata tgggcatgct
    27181 gtttattact cataacctca gcattgtcag aaaactggcc caccgcgtgg cggtaatgca
    27241 aaacggtcgc tgtgtcgagc aaaattacgc cgctacgcta tttgcatcac ccactcatcc
    27301 ttacacacaa aagctactca acagtgaacc gtcaggcgat ccagtgccgt tgccagaacc
    27361 tgcctcaacg ttgctggatg ttgaacagct tcaggttgcc ttccccattc gcaaagggat
    27421 tttgaagcgc attgtggatc ataatgtggt ggtgaaaaac atcagtttta cgctacgagc
    27481 gggtgaaaca ctgggtttag tgggcgagtc cggttccggg aaaagtacga cgggactggc
    27541 gctgctgcga ctgattaatt ctcagggcag catcatcttt gacggtcagc cactgcaaaa
    27601 tttaaatcgc cgccagctgt tacctattcg tcatcgcatt caggtggtat ttcaggatcc
    27661 aaactcctcg ctcaacccac gactcaacgt tttgcagatt attgaggaag gcttacgggt
    27721 tcaccagccg acgctttctg ccgcacaacg cgaacaacaa gtgatagccg tgatgcatga
    27781 agtgggatta gatcctgaaa cacgccaccg ttatccggcg gagttctctg gtggtcagcg
    27841 acaacgtatt gcgattgcca gggcattaat tcttaagccc tcgctgatca tacttgatga
    27901 accgacatca tcactcgaca aaacggtaca ggcgcaaata ttgacgctat tgaaatcatt
    27961 gcaacaaaag catcaactgg cctatttgtt tatcagccac gatttgcacg ttgtccgcgc
    28021 gttatgtcat caggttatcg tactgcgaca aggggaagta gtggaacaag gaccgtgcgc
    28081 gcgcgtgttt gccacaccgc agcaggagta tacgcgtcag ctactggcgt tgagctgacg
    28141 cttaaaaagg attgtagttt gaaaagggtt cggcaattgc cacaccaaaa tttttcaatc
    28201 ggcatgttgc agcaaactcg tcctggcgat ttacaaacag gcacggctca ccttcacact
    28261 ccagcaccga acatggaact tcgatgtcgc ttaacgcctg gcttagttta tacatcaccg
    28321 accatgcatt atcaccatcc gggctaagca atttaagcgc caccaggctg ttgtcaccgc
    28381 acggtccatt ttgcggaatc ggttcaacct tcgaacctgc gaaaccagca gaccagcgat
    28441 agttctgcgg tagacgatgg acgattgaga gttgtaatga agtcacttat tttccccgga
    28501 agtacattta cttcacaatt tgtttacatc aattttaaca catcatcaac aatccgtctt
    28561 tatacagatc gtaaagattg atgcctcgcc tgagtggcct ctatggctct gatttaagta
    28621 atatctgcgg gcgtggtcac gtttgcgggg ctatatgtac ccgtttctgc gatctaactc
    28681 aaccttttta actacaatga tgtgactttt tacataaatt gattttacat aaaataaaca
    28741 tatatcgggg gaatgataga tttgtggttg acatgcatca acaaaggaag ccttttagct
    28801 tcctcgttgt gcaatagatc accgtttttt cggccgactg gcgtacagat agaagagaat
    28861 ggagctggtt gcgcagaatg caattgacca aatcatcggc catgcagagt taaaggtcgc
    28921 aagagaaagc aatgcgccaa caattgcccc tatgccaaaa cggaaggttc ctgccagcga
    28981 agatgccgtt cccgccatat ggggaaactc atcaagaatg accgccatcg cattggatga
    29041 caccatcgac acgcagccca caaacgccgc aacgccaacc accagcgacc agaatcccag
    29101 ccccagcagc gcactgatga ccatccacgc cgccataata aactgtatcc acaaccccga
    29161 gcggaacata tttaacgcgc caatgcggcg gacgaagcgg ctgttaaaaa tggtcatcac
    29221 gaacaggaaa acaatgttta gtgcaaagta ataaccaaag ttttccggcg cgacgtggtt
    29281 aatttcaatg tagacaaacg gtccggcgct taagaacgag aacatcccgg caaagctgaa
    29341 accactggca agcatataac tcaggacacg cttatgacgg aacagcgccg caaagttacc
    29401 aatagtggta cgaatgtgaa aaggctggcg acgctccggt ggtaaggttt ctttaatcag
    29461 gaagaaaatc attgccgaag ccagaatcgc cgctaatgcc aggatccaga agatgtaatg
    29521 ccagctcagc cacaccagca cccaaccgcc gacaatcggt gccatcagcg gtgcaatagt
    29581 ggtcaccagc atgacaaacg acatcatccg cgagaactct tctttcgggt aaatatcgcg
    29641 catcagggcg ttaatgacca cgctggccgc agccgcagcc agcccgtgga agaaacgcat
    29701 cacaatcagc tgatcgatgg tgtttgccaa cgcacacgcc accgcggcgg cggcaaacac
    29761 cagcgtaccg ccgagcacca ccggcttacg cccgaagctg tctgccatcg gcccgtagat
    29821 taactgcccc aacgcaaagc ccagaatata agtactgagg gtcatctgcg tactgcccgc
    29881 aggtacgcca aactgcgctg aaattaccgg tagcgcgggc agatacatat caatcgacag
    29941 cggcatcaac atggccagca ggccaaggat aaaaacaata gcaaacgacg aatgctgtcg
    30001 ggtggtcaca acgggctcct gaaagtcatg gaaaagttag acgacgctgg caatttcttc
    30061 ttcagttaac ggacgatatt caccgggggc taaatcagca tccagcgtaa taccgccaat
    30121 acgttcacga tgcagctcaa ccacatggtt acccacagcg gcgaacatgc gtttcacctg
    30181 atgataacgc ccttcgctga tggtcagacg gacctgcgta ggggtaatca cttccagcac
    30241 cgctggctta gtgagatctt tttcgttatg cagctgtacg cctttggcaa attgctctgc
    30301 cgtatcgtca gctacgggtg attccagcgt caccagatag gtcttctcgc aatgatgacg
    30361 cggagaagta atgcgatgcg accactgacc gtcgtcagtc atcagcacca gaccggtggt
    30421 atcaatatcc aaccgccccg ccgcgtgcag tttccacgcc acaggttcat ccagaaaata
    30481 gagcaccgtt gggtgatccg ggtcatcagt tgagcaaaca tagccctggg gcttgttgag
    30541 catgaaataa cgtgggccgt gttgctgcac cagcggattg ccatcataag caacatcgtg
    30601 ttcagggagc agtttgaacg ctgcattgcg gacgatttcg ccatcaacgg tgacacgatt
    30661 gccgcggatt tcacgcccgg caatagcacg gctaacgccg agttgctgtg cgataaattt
    30721 atcaagtcgc atgtgtgtga ttttgcctgt aaaaacggag gtcgggcatt gacccgaaaa
    30781 tctgaactgt tgtctgccca gtatagcggt ctaataacat ccctcaaggg aaaaagatcc
    30841 atggcatact attagcagaa taatctacct acgcgagacc atgattttta cactccgccc
    30901 atatcagcaa gaagccgtgg atgccacgct caaccatttt cgtcgtcata aaacccctgc
    30961 cgttatcgtg ctgcccaccg gcgcaggtaa aagcctggtg attgccgaac tggcacggct
    31021 ggcgcgtggt cgtgttctgg tgctggcaca cgtcaaagaa ctggtggcgc aaaaccatgc
    31081 aaagtatcag gcgctggggc tggaagccga tatttttgcc gccgggctaa agcgcaaaga
    31141 gagccacggt aaagtggtat ttggcagcgt gcagtcggtc gctcgtaatc ttgatgcctt
    31201 tcagggtgaa ttttcgctgt tgattgtcga tgaatgccac cgtattggtg acgatgaaga
    31261 gagccagtat cagcaaatcc tcactcacct gactaaagtg aatccccact tacgcctgct
    31321 ggggctgact gccacgcctt ttcgattggg caaaggctgg atctaccagt tccattatca
    31381 cggcatggta cgcggcgatg agaaagccct tttccgtgac tgcatttatg agctgccgct
    31441 gcgttatatg attaaacacg gctatctgac gccgccagaa cgactggata tgccagtagt
    31501 gcaatacgat ttcagccgct tgcaggcaca gagtaacggg ctgttcagcg aagctgatct
    31561 caaccgtgag ctgaaaaaac agcaacgcat tacgccacat atcatcagcc agatcatgga
    31621 gttcgccgaa aagcgcaaag gggtaatgat tttcgccgcc accgttgaac acgcaaaaga
    31681 gattgtggga ttactgcctg ccgaagatgc tgcactgatt actggcgaca cccccggcgc
    31741 tgagcgcgat gtgttaattg aagattttaa agcccagcgt tttcgctatc tggtcaacgt
    31801 cgcagtactg accaccggat ttgacgcccc gcacgtcgat cttatcgcca ttctgcgccc
    31861 taccgaatca gtgagtcttt accaacaaat tgtcgggcgc ggtctgcgtc tcgctccggg
    31921 caagactgat tgtttaattc ttgattatgc gggtaatcct cacgatctct acgcgccgga
    31981 agttggtaca ccgaaaggca aaagtgacaa cgttccggta caggttttct gccctgcctg
    32041 cggttttgcc aacacctttt gggggaaaac gaccgccgac gggacattga ttgaacactt
    32101 tggtcgccgc tgtcagggat ggtttgaaga tgacgacggt catcgcgaac agtgtgactt
    32161 ccgtttccgt tttaaaaatt gcccgcaatg taacgcagaa aatgatattg ccgctcgccg
    32221 ctgccgcgaa tgtgacacgg tactggttga tccggatgat atgttaaaag cggcgctacg
    32281 actgaaagat gcgctggtat tacgctgtag cggcatgtct ttgcagcatg ggcacgacga
    32341 gaaaggcgaa tggttgaaaa tcacctatta cgatgaagac ggtgcggatg tgagtgagcg
    32401 tttccgtctg caaacgcccg cccagcgaac tgccttcgag cagcttttta tccgcccgca
    32461 tacgcgcaca ccgggcatcc ctctgcgctg gatcaccgcc gccgatatcc tcgcccagca
    32521 agccttattg cgacacccgg attttgtcgt tgcccgcatg aaaggtcagt actggcaagt
    32581 gcgtgaaaaa gtgttcgatt acgaaggtcg ttttcgtcgg gcgcacgaat tacgcggtta
    32641 atggtagttt tgattgatgt ataaagcgat tgagtataga atctcgcccg cttttgcata
    32701 cgcaaagcag atcacttacc tgttgctggg tcgcctgtag caggattaat ttaagagaga
    32761 aagaaatgtt tactatcaac gcagaagtac gtaaagagca gggtaagggt gcgagccgcc
    32821 gcctgcgtgc cgctaacaag ttcccggcaa tcatctacgg tggcaaagaa gcgccgctgg
    32881 ctatcgagct ggatcacgac aaagtcatga acatgcaagc taaagctgaa ttctacagcg
    32941 aagttctgac catcgttgtt gacggtaaag aaatcaaagt taaagctcag gacgtacagc
    33001 gtcacccgta caaaccgaag ctgcagcaca tcgacttcgt tcgcgcttaa ttgctgaata
    33061 agttgtaaaa aaccccgctc cggcggggtt ttttgtatct gcagattatg cctgattacg
    33121 gtattgctat tttttgcagg ccagataagg cgttcacgcc gcatctggca ttcagaacac
    33181 aaaaccgatt aattgccgcc agacgtccgg cgctgcaatt ggtcacgcaa attcggcggc
    33241 gtgcctttaa tggtcagggt atcggttgcc ggatcccaga agatgcgttc acctaacagc
    33301 atcgcatcaa agttaatagt caagccaccg ccgctaccgg caaacttcgt caactgacgc
    33361 agtgtgctac ggtctgccgg gaagctctct tccagttcgt agcctttttc agccgcaaac
    33421 tccgtgaaac tcacttcgct gacgcctgcc agctctttcg acagcgactc cagttcgatc
    33481 tcttcgcctg cctgcagctg ctcattacag tagctataaa cctgctggcg cacgttctgt
    33541 cgctctgctt tatccagttg tgcttcggca gtgaaatcat caaccgcttg caacagccca
    33601 cggttttgcg ctttcgcgtt taacccttcg ctggccccga ggaaatccat aaagaaatcc
    33661 gccactttgc gccctactcg ccctttcagg aaagtgagat agcgggtgga ctctggattg
    33721 gtttcccatt cggttaaatc gatacgcgca acaatatccg catgattgat atcaagataa
    33781 tgggttggat tgatgtcgag attttcgtta acgcgcatac tgctcaggtt gctcagaact
    33841 gccaccagca gatactccac cgccagataa cggtagtggc aaaacagcac gaatccaccg
    33901 tcagcaaaag gatatttcgc taattcgtca cgcaggcgcc cggttgccgc gcggctaaat
    33961 gccagaaagt cctcttcgcc ctgacgctgt aagcgcagcg tctgcgccag ttcactctct
    34021 tcgctaaaca agccgtaagc tttatttttg gcgctataga cccgatgcag ttctgccacc
    34081 atctcaacga cggtttctgt cggttccagc aatgaatcgc gcaacaccag ctcaaggttc
    34141 tgctcatcac gcttgataag ctggtgcaga gcaatctggt tgatatccag actcatgata
    34201 aactctcctt taagaccggg cggtattcaa ccaccgccgg ttaagcgacg caataaaaga
    34261 tggcggtcat tttacagaag gcagcgtaac gagaatgatt taacgcataa aaaagcagaa
    34321 aaaaaaccgt tgctacggta atatgttgcc ctttcatcaa ctaactgatt tcgatttatg
    34381 ccacaaattt cccgctacag tgatgaacag gttgaacaat tgctcgcaga gctgctcaac
    34441 gtactggaaa aacataaggc tccgaccgac ctttccctga tggtgttagg caacatggtc
    34501 actaacctta tcaataccag cattgccccg gcccaacgcc aggcaattgc caactctttt
    34561 gcccgcgcct tacagtcctc tatcaacgaa gacaaagcgc actaagggaa acagataaca
    34621 ggttatggta actcatcgtc agcgctaccg tgaaaaagtc tcccagatgg tcagttgggg
    34681 gcactggttt gcactgttca atattctgct ttcgctcgtc attggcagcc gttacctgtt
    34741 tatcgccgac tggccgacaa cgcttgctgg tcgcatttat tcctacgtaa gcattatcgg
    34801 ccatttcagc ttcctggtgt tcgccaccta cttgctgatc ctcttcccgc tgacctttat
    34861 cgtcggctcc cagaggctga tgaggttttt gtccgtcatt ctggcaacgg cgggaatgac
    34921 gctattactg atcgatagcg aagtctttac tcgtttccat ctccatctta atcccatcgt
    34981 ctggcaactg gttatcaacc cagacgaaaa tgagatggcg cgcgactggc agctgatgtt
    35041 catcagcgtg ccggttattt tattgcttga actggtgttt gcgacgtgga gctggcaaaa
    35101 gctgcgcagc ctgacgcgtc gtcggcgctt cgcgcgcccg ctggccgcat tcttatttat
    35161 cgcctttatc gcctcgcatg tggtgtatat ctgggccgat gccaacttct atcgcccgat
    35221 caccatgcag cgcgctaacc tgccgctttc gtacccgatg acggcgcgac gttttcttga
    35281 gaagcatggt ctgcttgatg cgcaggagta tcaacgccgt cttattgagc aaggtaatcc
    35341 agacgccgtt tccgttcagt atccgttaag cgaactgcgc tatcgcgata tgggcaccgg
    35401 gcagaatgtg ctgttgatta ctgtcgatgg cctgaactac tcacgcttcg agaagcagat
    35461 gcctgcgctg gcaggttttg ctgagcaaaa tatttcgttc acgcgccata tgagctccgg
    35521 caacactaca gacaacggca tctttggcct gttctatggc atctcgccga gctatatgga
    35581 cggcattctg tcgacccgta cccctgcggc gttaattact gcgcttaatc agcaaggcta
    35641 tcagctggga ttattctcat cagatggctt taccagcccg ctgtatcgcc aggcattgtt
    35701 gtcagatttc tcgatgccga gcgtacgcac ccaatccgac gagcagaccg ccacgcagtg
    35761 gatcaactgg ctgggccgct acgcacaaga agataaccgc tggttctcgt gggtctcttt
    35821 caatggcact aacattgacg acagcaatca gcaggcattt gcacggaaat atagccgggc
    35881 ggcaggcaat gtcgatgacc agatcaaccg cgtgctcaat gcactgcgtg attctggcaa
    35941 actggacaat acggtggtga ttatcactgc cggtcggggt attccgctga gcgaagacga
    36001 agaaaccttt gactggtccc acggtcatct gcaggtgcca ttagtgattc actggccagg
    36061 cacgccggcg cagcgtatta atgctctgac tgatcatacc gatctgatga cgacgctgat
    36121 gcaacgcctg ctacatgtca gcacacctgc cagcgaatat tcgcaaggtc aggatttgtt
    36181 caaccctcaa cgccgtcatt actgggttac tgcagcggat aacgatacgc tggcaattac
    36241 caccccgaaa aagacgctgg tgctgaacaa taacggtaaa taccgcactt acaacttacg
    36301 tggtgaaaga gtgaaagatg aaaaaccaca gttaagtttg ttattgcaag tgctgacaga
    36361 cgagaagcgt tttatcgcta actgattaat tataaatcag ttagcaaaat atcttacttg
    36421 caatcggtgt ggaaaacggt agtattagca gccacgagtc ggcacgtagc gcagcctggt
    36481 agcgcaccgt catggggtgt cgggggtcgg aggttcaaat cctctcgtgc cgaccaaatc
    36541 gaatatcgga cagcatcggt aacctattga aagcccgtta atttactgat taacgggctt
    36601 ttttgttgtt ttcagtcgcc ggattgaatc ggtaagatag ggttgtaacc ggatttttta
    36661 gctacacgtt tagctatacg gtccagcgtg tagctaaagc cgtatagcta cgaccaggca
    36721 tatagctacc gatgagtaaa aaaacatggc acgaaaaacc accccactaa ctattacgga
    36781 gatcaaaaac gcacgaccag gggaaaagga atataccctg caggatggcg gaggattatt
    36841 tcttctggtg aagccctccg gatcaaaaat ctggcgtttt acgtactacc gcccggcaga
    36901 taaaaaacgg actattatca gccttggatc gctaaatgat gtttccctgt ctgatgccag
    36961 agagcgacgg aatgaataca ggtcactcat agcaaaggga actgacccac aggactacga
    37021 acgccggaaa cgtgaagcag agagcaggaa aaagggcaac acgttcgaaa aagttgcctt
    37081 ggactggtac gagatgaaaa aaggccagaa tctggcttac aacacgatta aggatatctg
    37141 gcgatccctg gaaaaatacg tattcccgta catcggaaac acgccaatag ataccctcac
    37201 cgctcgccgc tttgttgaga tactcacacc cattaaagca cgcggcaacc tggaaactct
    37261 gaaacgcgtt ttacaacgca tcaatgaagt gatggatttt gctgccaaca gtgggctgat
    37321 tgacatcaac accgccgcga acgtccgcaa ggcattccct tcccccacta aaaagcatat
    37381 gccaaccatc cgaccggaac agctaccgca gctaatgcac gatttatcgg tcgccagcat
    37441 agaacggcaa accagattgc taatcgagtg gcaactgctg accgtagcac gcccagccga
    37501 agcagccgcc gcacgctggg aagaaataga tctcgatgcc gaaacatgga cgattccagc
    37561 cggacgcatg aagatgcgcc gtgaccatgt gatccctctt tgcggtcagg cgatggctgt
    37621 actggaaaca atgaagccaa tcagcgcaca cagggaacat gtttttccca gccttaaaaa
    37681 tccaatgctg ccaatgaaca gccagaccgc taacgctgca ttgcgccgga tgggatacgc
    37741 tggtgtgctg gtgtctcacg gattacgcgc catattcagt acagcagcga acgaggaagg
    37801 attcgagccg gacgtaatcg aggccgcact cgcacacgtg gacacgaacg aggtaaggcg
    37861 agcatataac cgaagtaact acctggaaaa gcgcgtggtg cttatgcgct ggtgggggga
    37921 atttgtagag gccgcagcta ccggagtgac catagccagt ggtaaaaggg gtatccgtgc
    37981 cgtgtaactg tacaaaaaac cagtaaaagc gatgcaaacc atgctaaacc atcgtataat
    38041 cgccacaacc cacccaatac agagaggagt cacccaaatc atgaaattca aggagctatc
    38101 caggtgtttt tcaatgaaaa ggtatcccct gcttgcggcg aagggctgca actggcgtta
    38161 atggcaaatc gtgaattctg gtcaacatac gatccggaag acaaatcaac agcccccaca
    38221 aaacacgagg tagtcagttt tttgcgctcg cgtggtgcat cgaaaaatct ggctgaaagc
    38281 atcgacaagg tgctgaggcc caccagcctt aaatgcggtg ggcgacctaa gaagtggaaa
    38341 cggtaatcac aatagcggcc ctttgcggtc gctatttttt tgcagaaaga aaagcgtaat
    38401 caatgagata aaaaacagtg gataccgttt taaaacggtg ggtactgttt ttcccgccca
    38461 gccctgtttt accgtattta tcaccggaat acgccggatt aacgaggtaa aacatagtgg
    38521 aaacaatcag aaaaatactt acccgtcagg aagtaaaaaa tattctgcgc atcaaggcag
    38581 acagttcgct acaggacatg atcaacgcag gaaaattccc gaaaggcttc aaaatcggtc
    38641 tgcgtcgtgt tggctggtat gaagatgaag tgctggcctg gctgaaagag cgcgaggaag
    38701 aagcgcgcgg aacggctgcg taatggtgtg aggcgtaacg cgatgaacat aacaaaaagc
    38761 gccccgttgc cggagcgccc ttgcgaacaa ttaacctact gcgcaaaaaa tgaatcagtg
    38821 cagtgggatt atatcaaccg tgtagcgaag cgccacaatt gccggataac aggcaaaaca
    38881 aaggccaccc gctacggtgg cccttcgaca caagctacac gttatcccca acgcatgagc
    38941 attgccaaca atgccacatt tgcggctggt gggcaatgtg atcagtgtgc tggcttgctg
    39001 gtgggctatt cctgctcttt aacattgcca tgccgcgatg ttttccaggt atgcgacccc
    39061 atttttgtgc gcctgtactc ttttaagaac ttctcaaggg caaacgcaca tggcgcaaat
    39121 ctctcctgtt cttgttcgct taccgcattt ttgcgttgtt ttttcctgga tgaggataat
    39181 ttctttaatg atttgtcagt catcgtagat acctgtaacc cagtgcgcca cagttcaccg
    39241 caccacagcg ctggtgatgg ttactcctgc tctttggcct tgcgccgctg gcggcgtttg
    39301 atctcgcctt gcattgacgt aatgatgaat tgtgatgtgc tttcgcctga ttctttcact
    39361 gattccatgg cgtttactat ttcgtgtggt acacgagcct ttagagcttg tgattttgcg
    39421 tttgttgtac ccgttgccat ttctattcct ctggtggatt ggtgggggac agtatacaca
    39481 gaaaaagcac aaataaaact cttgacgtgg gccacaccta aaacatatag tgggccacac
    39541 cttaaaatta tcaaggcgca taaatgcaaa gccccgcaag tgtcgttacc actcgcaggg
    39601 cttctaacca ccaacgatag cagaagtatc gaggtagcta tgttaaatca taccacacac
    39661 ccgcaagggc gggactcgca caacctgaat aaacccgatg taaaaaacct gttgatcgcc
    39721 aatgccagcc agggctatga tttacccgca ccagcaaaat ctggtgccgg gattggcgtc
    39781 ctggaaatgt caaaggcgat atatgacgcg ccagcgtctt ttttatcgtc cgcattcgct
    39841 cacatcaaag ttatggtggg ctgggcgggg gcttcttcgg aagcgccggt tccctttgac
    39901 gccggttacg ccaaccccgt tcagtccacc gccagcgaaa ttggcgtttc ctgcggtgga
    39961 aattcttcac tgtcaaagga ggctgccaac atggctacta tccctaccct tatacattct
    40021 cacactgtct ttatctggcg ctttatcatc tttggcgcgt cagaatccca aatcatccac
    40081 gtcaccgcct ggacggaacg cgaagcgcgt aaccattgcc cgtccggttg tgtcgctgta
    40141 ttcgccgccc gtattcgtca ggaggtgcgc catgtgcaat aacacccgtc aggacgcagc
    40201 cgccgaagcc atcaaaacgc tgatgcacgc gctgattgat atttctgtta tcgcggacag
    40261 ggcacataag cacgccacca gcgaaacaga atatgccggg gctttcgttc ctcactcact
    40321 ggctgttatg caatttagtg ctgatatggc actgaatgag gctaaagcca tcctgattac
    40381 tgattgtgaa aatggggggg ttatgcgtga tgatcgtttt aatgccctga aacaggaatt
    40441 ttccggcgtt cctggtgatg cggctgatgc gctttcgtca atgccagaac ttattagagc
    40501 ggattttttc ttactttcca cgaaagaata taaatcaacg ggacttgatg tactgaatat
    40561 tgccgccgat tatgctgatt tcgtgacaga ggttatttta agaaaagcga cggacgggga
    40621 ttaatatgcg tgatatttac cacgaaacaa tagaccgcgc atttcttgca ctttctcaca
    40681 gtgaaaacat gttggaaata ttgcgcttat ggcttgaaac gcttggcgat aatgaacgcg
    40741 acaaacaaaa atcccgaatt gtcacggcat taataacgct tcttgagcct gtaataatgg
    40801 aactacaaga aatagaccta ttgcacgaca gatataaaga acagcacacc ggagaataaa
    40861 aataatgaaa cttaaatatc ctggcttaac tgccagcggc aaaactcgca ctaaattcat
    40921 gcgcggtgat atttaccgcg accagtacgg cggcacggta atgattaagg gcgtggagga
    40981 acggcgcgta acttaccgcc gtgaaggtta cgaatatgat tgcgtgatgc ctgtttatca
    41041 gtttgcccgt gatttttctc tggtacagac cgcgccgcat aacgtgccca ccagcaacgc
    41101 cagggcacgg gcaaacatcc agaagctgaa aaccatgatt aacggattca ggggtaaaaa
    41161 atgaaactgg caccgaacgt aaaacagcag tcacgcggca taaaacacaa aggaacagaa
    41221 gtcattattt ttgcgggtag tgatgcctgg gcacacgcga aacaatggca ggaacatgat
    41281 gcgcgtatgg ccggagataa tgagcctcct gtgtggcttg gggagcagca gttatccgaa
    41341 ctggataagc tgcaaattgt gccggaaggc cgaaaatcag cacgcatata cagggccgga
    41401 tatcttgcgc ctgtaatgat aaaggcaatt ggtcagaagc tggcggcggc aggcgtacag
    41461 gatgcaaatt tttaccctga cggtatgcac ggtcagaagg tggagaactg gcgcgaatat
    41521 ctggcccgtg agcgccagaa tctttctgat ggtctggtca ttgagcttcc ggtaaagcaa
    41581 aaggcgcaac tttcgcagat ggcggacagt gagcgcgcgc agctgcttgc cgatcgcttt
    41641 gatggcgttt gcgtacatcc tgaaagtgaa atcgttcacg tatggcgcgg cggggtatgg
    41701 tgtccggtca gcacaatgga acttagccgc gaaatggtgg cgatctattc agagcacagg
    41761 gccactttca gcaagcgcgt aatcaataac gccgtggaag cgttaaaagt tattgccgaa
    41821 ccaatgggcg agccgtccgg cgatttgctg ccgttcgcca atggtgcgct tgacctgaaa
    41881 acgggggaat tttccccgca cacgccggag aactggatca ccacgcacaa cggcattgag
    41941 tacacgctac cagcaccagg ggaaaacatc cgcgataacg cgccaaactt tcataaatgg
    42001 cttgagcacg cagccggaaa agacccgcgc aagatgatgc gtatatgtgc cgcgctgtac
    42061 atgattatgg cgaaccggta cgactggcag atgtttattg aggccaccgg agacggcggg
    42121 agcggtaaaa gtacattcac acacatagcc agccttctgg cagggaaaca gaacacggta
    42181 agcgctgaaa tgacatcgct tgatgatgct ggtggacgtg cgcaggttgt cgggagtcgt
    42241 cttatcgtcc tggctgacca gccgaaatat acaggcgaag gaacgggcat caagaaaatc
    42301 acaggcggcg accccgtgga aattaacccg aaatatgaaa agcgtttcac ggcggtaatc
    42361 agggcggtgg tgctggcgac caacaacaac ccgatgatat tcaccgaacg ggccggaggt
    42421 gtggcacgtc gtcgcgtgat tttccgtttc gacaatatcg tcagtgatgc cgaaaaagac
    42481 agggagctac cggaaaagat tgcggctgaa atccccgtta ttatccgccg attgctggcg
    42541 aactttaccg accctgagaa ggcacgggct ttactactgg aacagcgtga cggtgatgaa
    42601 gcactggcaa taaagcaaca gacggatccg gttattgagt tttgccagtt cctgaatttt
    42661 ctggaggaag cgcgcggcct gatgatgggg ggcggtggtg attcagtgaa gtacacgacc
    42721 aggaacagcc tttaccgcgt ctatctggcg tttatggcat acgcaggcag gagcaaaccg
    42781 ctaaacgtaa atgactttgg caaggctatg aagcctgccg caaaagttta tggacatgaa
    42841 tatattacgc ggaaagttaa gggggtaacg cagactaacg caataacaac agacgagtgc
    42901 gacgcgtttt tataattttt tgtaattgct gtctaccctg tctacctgag taaaggaaaa
    42961 tacatttaat tcagtatatt aagttaggta gacagccttt ttttacagtc tacccactgt
    43021 ctaccctctc tacctgattt tacctgaatc agacagggag gtagatacgg agtagatagt
    43081 ggataaaagc actctacccc gctgaaagcc gcgccattac tggcataggg gccactaagg
    43141 tagataaggt agacaagggg aggcacaact caaaactttt taaacgaggg ggtaaaaata
    43201 aatatgcaca cttcagggag atttaataaa tcactcaaaa aacgcagaga cagaacagag
    43261 ccgaaatatc gcgcgttaga catgacagag cacgctttaa aggtggcaat cagaacgata
    43321 gaccgccacg cgggggaagg atacgcgaag gaacatcccg acctgataag cgcattcatg
    43381 acaacggcgg cagcaaactt tgccacgctg acagaacggg agattgccga agcggaacag
    43441 gtgacaacca tcaatgttaa aaccggagag cagacagcat gacagcacag atagcggctt
    43501 acgggcggct ggtggctgac ccgcagttaa agaccaccag caaagggaca caaatggcga
    43561 tggcgagtat ggcggttccc ctgccatgca gccaggcaaa tgacggaacg gcgacgatgt
    43621 ggttatctgt cctggcgttt ggcagacagg ccgacgcact ggcaaaacac cacaaaggcg
    43681 aactggtgag cgtggcgggt aacatgcagg taagccagtg gacaggccag aacggcgaaa
    43741 cgcggcaggg ctggcaggtt atcgcagaca gcgtaatcag tgcgagaacg gtgcgaccgg
    43801 gcggcaaaaa aggccagcag gggcaggcta ctgacgcact gaacagggca aaacaacagg
    43861 cgggtaacga tgatccgtac ggggataaca taccgtttta agcaacgagt gacagaagcc
    43921 ggagcaatcc ggcttttatc agtttagtcc gtcacaccac gcaaaaaaaa ggccggaata
    43981 ttccgaccct ttcatcacca aagagaataa tttatgtctt tgaacttgta acgctgtaca
    44041 gaatgacacg taacgccgga taaataaacg aagattgaaa ctttgcacac tattgcatag
    44101 caatgcataa agatgccgaa caaggcagat gataaaatta acgcgacact tttactaagt
    44161 attaagaggt tatatgagtg atttatattc accagctatg ttaatacagg ttgttaatgc
    44221 cgaagatatt caatggcaga ttaattcttt atttataaac ctgtttttta agcgagtcgt
    44281 tacatttgag acgcgggata ttgcgcttga tattattgac gatccagaca tcccgatggc
    44341 tgcattttgt tcccctatgg ttggtagcaa agtctcacgc gatgaaggct acgaatcaaa
    44401 agtaattcgt cctggctata tgaagccaaa aagtagtatc gacccaaata aaatagccgt
    44461 tcgtcaacca ggcgtatcac cggaacaatt caatgcatat tcatcacgca gtttcaaaat
    44521 aaagcgagcg ttagtaagac aagcgcaggc aattcgtgcg cgtattgagt ggcttgctgt
    44581 tcaggcggtt acaacgggga aaaatatcat tgaaggcgat ggaattgaac gttatgaact
    44641 ggactggaat ataaaaccac aaaatattat cacgcagttc ggcggtacgg agtggggcgg
    44701 tagagattta tcaacatttg atccaaacga tgacatcgaa gagtacgcag aaatcagcga
    44761 aggtactaca aatatcatcg taatgggccg caacgtatgg aaaaaatacc gcgcctttaa
    44821 agcagtaaaa gattgccttg atactcgacg gggatctaat tccgttcttg aaacggccct
    44881 gaaaaatctt ggggattctg taagcttcaa gggttacgtt ggcgatgttg ctattgtggt
    44941 atatagcgga cgttataccg acgaggacgg aactgaaaga tatttccttg atcctgattt
    45001 gatggtgctt ggcaacacat cattacaggg catcgttgcc tacggtggca ttcaggatcc
    45061 tgagttaatc agaatggggc ttactaaagc cgaacttgcg ccgaaaaatt acatcgtacc
    45121 aggtgatccg gctattgagt acgtacaaac gcactctgca ccacagccaa taccggcccg
    45181 catcaatcgt tttgttaccg ttcgcattgg ttaaggggga gcaatggcta ctcattacac
    45241 tgaactcatg gctggcactg aagcactggt tactacgctg gggatatttt cagccaataa
    45301 aggggtaatc cctgcgttta cgccactgat gcaagaagat gtaactggtg cactggtggt
    45361 atgggatgga acgagcgcag gcaaagctgt ttatgtttcc gctgtacaaa tcgatacagc
    45421 gacaaaaacg caggctcagg tttataaaac cggcgtctta aatgttgatg ctctgaactg
    45481 gcctgagtct gtaacacaac tatcagcaaa agttgctgcg tttgttggct caggtatttc
    45541 tgttcagccg ctggcacgtg tgtgaggtac gagaatgatt gaaagagata gtcagctacg
    45601 agagctatta gatatcgatg ataaaatgcg cttaagcgag cgtcttgtcg atatggatca
    45661 ggtagtggag cttacaaccc ttagccgtcg cacattgcta aaccttgagg ctcgcggaga
    45721 gttccccgaa cgcgtacagg ttacgaaagg ccgcaaggca tggtatttaa gcgaagttgt
    45781 tgcgtggatt aacaacattc cgcgcgcatc aaattattgc cttgttccca cccccgaaaa
    45841 acctgatgcg gcgttatgcc tcaagattga acgcgccagg cgtaatgccc tgaaagggcg
    45901 caataagttg attggttgat gaaattaggg cccgctctgg ctggcgggtc ctttccggca
    45961 tatggacccg ttacggggcg gcagacgcgc gggttttcgc tatttatgag cctttttcgg
    46021 gtgctggtgg tggttttgtt gttcgctcta tctctatgaa taaaaaggga aagataaaac
    46081 aaatacacca acctgaaaca ttacttaagt ggggatattg atgaaatcgc acctgatgaa
    46141 caaaaaaaac atggcgcaaa gctgccgtgt aagtgcgaca gcgttcgaca agtggggagt
    46201 gactcccgtt gaacgtaaag gccgcgaggc gttttatgat gttgccagcg taatagacaa
    46261 tcgggttagc aatgcaatta accagattac agacgacaaa ggcgagattg ataatgatga
    46321 gcttttgcga gtcaggatca gattgctgac agcgcaggcg gaggcgcagg agcttaaaaa
    46381 cgagcgcgaa cgcggcgacg tgattagtac ggaattttgt atatatgcgc tttcaaaact
    46441 ggcgagtcag atttcatcta tcatggacag cctgccgctt accatgcaaa ggcgcttccc
    46501 acagatgacc cccgccatgc tggatggcct gaaaaaagaa gttgtcagag cctgtaacgc
    46561 atgcacaaaa cttgatgaaa acatcccgcg aatgctgtcc gattatctga tggaaactac
    46621 cggaaatgtg cctgataagt ttcagccgga taaagacaag taacgtagtg cacaatgacc
    46681 gaagccagtt tactgactgg ctttcagcgt tgcgctggtg ggagttatgc gtcagtgatg
    46741 aacaaaaaac aatcgaaatc gacaccgaaa aataaaacat caagtcatat caatatattg
    46801 cattggtggt gatgacgaat aaaaatgcaa aaactagcct ttttccgcga tgctcccgcc
    46861 ccgtggcagg gcaccccacc aggaggaccc gccatcacta tggaggccat gaccatgacc
    46921 gagaccgaag cgctcgggat aatccgcagt attaccggaa tcagccagca ggctgacgaa
    46981 caggccacgc agccggatac agtcaccgct gaaaattacg cgcgtgtgat ggctgaggtg
    47041 atgcgccgtg acggtatcga gcttaatggc gtggatatac gcaacatacg caccagagtt
    47101 ctggagatgt tgtcgtaccg tcgccgcgtg cagatgtacc aggagaaaga aaaaattacg
    47161 taccagtgga agaagccgga gcggttacgg cgataaatat tggtgggagg ggcggatcaa
    47221 atccttgcag ccatggctgc ccgggaccga ccgcctaccc ttgttcacat cgccgcaggt
    47281 tcgaaaactt ttttgggaag gtgagcacgg gattgataaa tgaggtctat ctataaaaaa
    47341 tcacaaaatc cgcgccattg ctggatccgc caaaaatccc ccaccttacg gcagacaaag
    47401 aaaacgcgaa ttatgggcct gttgcagaga aaaaaggtct cactagtttt gcgcatccta
    47461 gcatcgaggt tcgtcagcct cccatcagca accagataac taatctcgct ggtgggcatg
    47521 atgccgatat ggggactccc ataacggttt atccgtgatc atccaccagc ttgatgacag
    47581 ataacaggga gtcataacgg ttaaaattgt atacttttgc agcaaacatt tttagctaca
    47641 cgttaagcta tacgattttg agtttaaatt tttcaaatta aattaaatca aatggttata
    47701 cgcacgtttt gaatactctc gtggaccaaa aatcccaaga aaaaaccaac ctttacggtt
    47761 ggtttttttt atatctgcaa ttaattcgat aaacagaccg tgacacatca cagcctgttt
    47821 attttttgtt atcagaacgt ccagaccaca cccgcctgag tattccacgg cgattctacc
    47881 cctgcgccat tgccatagct gactgacaaa tgaccgctta acgtcggggt aaacgatgac
    47941 cttatcccag cctgataaac gccacgggtt ccagccacat cattattaaa tttgccatcg
    48001 tcattaactt tcacctggtt agaatcggcg tattcctgac gcacggcggc tttcagtcag
    48061 ggttccagcg tcgtaccgtt ttgcaggtcc atgtgatagc ttaccgccgt tcccgcttca
    48121 gcgcgtaata tccgggtatt tcccacatcc gcgcgcatgc cgtttgataa cgtgtagtcc
    48181 tgaccatctg tggtaaagcc ggtaaaggcc agatagggtc taacactcca caatccgtca
    48241 acccaacgga acccgctctc gacatgagca cccgcgccgt tactattgta atcgccaaac
    48301 gctgttgccc cattactcat cttgcaatgg atggtgttgg caaaacggtc aactttcacc
    48361 actccatcaa cataggcacc gttctgatgc tcccaaccgg cataagcccc cagggtatag
    48421 ctatcgacat tgcctttgcc gccgcgatca aaaccaatat cagaatgaga gtaaccaaag
    48481 aacaagccgc gaattgtgct ggtttcttca cgggagaaac ggctatcgat accgagcgtc
    48541 agcccggtca atgtttgctc aaagccagcg cccgcatcag tggtcacgtt gttgcgggtg
    48601 ttaattgccg aactccacat cgccgtatcg taattaacgc cttttacgct accaagacgc
    48661 tcacgcacgg tgtccagttc tgcatcaaat accagcggtt gtgctgccgc catattcagc
    48721 acatcagtgg ttgaaggggt aatttgcgcg cgattctctg ccaaactcca gctatggttg
    48781 ccattatcca gcaaggtata ttcatacgta ccgatatcaa caacgcctcc ggcattgccc
    48841 aacgtaaatg cagcatcacc gccgcccgtt gttaccagtg taaggctatc tcctgctgcc
    48901 gggctggcac cggtgtccgt cacgaatatt ttgaaatcac ctgttgcctg accggtgacg
    48961 ttgagctgat cgctctgatg attagccata tcggtacgca tataaaaatt gccgtttccc
    49021 gacagggtat tggtggtcaa cgtaatgaaa ttttccgcac ttgccgtcac tgatgaacga
    49081 gtcactggct catccatcat aatcacattt gcgtcagaca tcgcaaggtt ggctaagttg
    49141 aggagggtgt tttggttcgt cgtagtgata tcggcaatga tggtccatac gctattttcg
    49201 agcgaaacgt ccgctttgct ggtatccacg gcaccatgcg ttctaaaaga agcgccctca
    49261 gaaaccacta ccttacccac caacattgcg ggtgcataat ttatttgcgg cttcatgacc
    49321 tcaagaatgc catcattccc tctgactgaa acgttaacca ttgtgccagc ccagacgtta
    49381 gcgcggccat tgttgataac catattttca gaaatggctt ttgaggaata cgtgatactt
    49441 ccattctgat ctgatcgacc gagatcatat accgcatttg cctgcacttt cgtaccagta
    49501 tcctttccca gcgattgcat agtggcatgc tcatcaagga tagtatcaat ggcctgcgtg
    49561 tcctccataa caatgagccc ggaaccatca tccagttcat aattttttga cacaccatct
    49621 tttatactaa attggccttt actgtttgga ccactcactt ccagcgcatt cgttgagaca
    49681 attaattttc cgcctgcttt tttatcaacg ccagttacag tcccgccatc cataacctcc
    49741 agtaagccgc cactatctac agtggtatta taagcgaagt cattttcttc aactcgcaaa
    49801 cttccgccgt tttccaacaa catattatta gcaataccat tcttgatatc gaactgaccg
    49861 agacggtttg ttccgaatac ctccatggcc cgcgtggttg ttttaatagc accgcctgct
    49921 ttctgatcta ccgcaatcgc taatcccccc tctttaacct ccagtagtcc tcccttttcg
    49981 atagcgacaa agacggcccc cccatctttt tcaacgatta agcgcccgcc tttaatcgtg
    50041 gtatcattcg ctgcgccata aacctgtagc acaccattat tgagcgtagt ctggtttgcc
    50101 gcgccaccca tttgaacaat ttgataaccg tcatttaata ctgagtattc tgcggcgcca
    50161 ttcatttcaa tgtactgata ccctccgtta atttcagtat tattacttac accaaattct
    50221 tttatatgct gttctccgcc aggattgatt ttcgtattat tggcggtccc ataaaccagc
    50281 tggatatctt tttccaggac aacaccatca actgtctcac catactcaac tgttgatgcc
    50341 aatgctatgg gtgaatataa cgctgtagcc accagaacag atattgcgga acgacaaaga
    50401 gaaacagaac cagattgatg cattgagctt tcatcctatg aaattaattg ctgttaaaag
    50461 cattgggtac ggaaaatacc catagctcca tacccggagt cagtttttaa aaactgttta
    50521 aagaaatgca caagtattgt gattgatttt ttagttgttt ttcttgatga gaagctgatg
    50581 caaaattccg tctttataat gaaaatgatg ccaaagcgaa cgacaaggtt gtagttttca
    50641 ctacatgtcc atacataaaa tggggtaaca ttcacgcgcc tggtagcgtt accaacgcta
    50701 cgctcaaaca taatgattct aataaaacct caggagacta ctatgcctga agcaacgcct
    50761 tttcaggtga tgattgtgga tgatcatcca cttatgcgac gcggtgttcg tcagttactg
    50821 gagcttgatc ctggctttga agtggtcgcc gaagcgggcg acggcgcgag cgcgatcgat
    50881 ctggcgaata gactggatat cgacgtgatc ttgctggatc tcaatatgaa aggtatgagt
    50941 ggcctggata ccctcaatgc cttgcgcagg gatggcgtta ccgcgcaaat tattatcctg
    51001 accgtatcag atgcctccag cgatgtcttt gcactgatag acgcaggcgc agacggttat
    51061 ctgttgaaag acagcgaccc ggaagtattg ctggaagcaa ttcgtgctgg agcgaaaggc
    51121 agcaaagtct ttagcgaacg cgtcaatcag tacttacgtg aacgtgaaat gtttggcgcg
    51181 gaagaagatc ccttcagcgt gctgacggag cgcgagctgg atgttctgca cgagctggca
    51241 caggggctgt caaataaaca gattgcctcg gtgttgaata tttcagagca gacagtaaaa
    51301 gtacatattc gcaatctgct gcgcaaactc aatgtccgct cacgcgtggc agccaccatt
    51361 ctgttcctgc aacaacgcgg ggcacaataa aaatagcccg atggcatcac catcgggcct
    51421 ctttttattt actctcctgc ggcgacaaat gttgcatcgc ctgcgcgata ctacgttcaa
    51481 tcaccgcacg gcgagtatcg ttggcaggta agagtttcaa catcatctcc cacgcggcaa
    51541 cggcttcgcc aaatcgctgc tgctcaaagg cattaaacgc atacatgctt aacacacgga
    51601 tattgctgtg gtcgcttctc accaactggc gcagcagttc accaccgagg cggttgtcgt
    51661 tgggatcaga tgaacgtgtc aacgcttcag cataacccag tgcggcatcg ctgtttttcg
    51721 gatcgaggcg atacgcagta gcgtatgcat cggtggcgat actagcgtta cccagcgcca
    51781 tgccaacgcg gcccaacata atccagcctt ctatatctcc cggatttttt tgcagttgag
    51841 tacgcatccc cagcgcaaga cgcgacatct cttcttcgtt gagcggatcg gctttcggat
    51901 ccagcgccct gtccagcaac gccggagcct gtgccgtggc ctgctgccag attttcacct
    51961 gctgataatt tccggtctgg tagtagctga cgccagccac aattaacgcc accacaatgc
    52021 ccggcaaata aacaatatat ccggcacgct taccttcctg cacgctttgt tcaggaaacg
    52081 cttccggcac tacgcgtacc cgacgccgcg agcgggcgta tatgacccaa ccgccaatgc
    52141 caatagccac taccggaagc acccacagca gcacggtcag cggcgttaac ggcggatcgt
    52201 aagtgacgaa gttgccgtaa cgcgccacca tataatcgac aatctctttt ttacttttac
    52261 cttcctgcat cagttcatac actttctgac gcaggtcggt ggcaatcatc gagttggaat
    52321 cggcaatgct gttgttctgg catttcgggc agcgcagttc ttcagtgagc tgacggaact
    52381 gttgttcctg tgcttcatct ttaaactgca acacgtcgat ggtcgccagt gctgagccgg
    52441 agatcatcag catcagcacg cccaataaaa acctcattgt gcggcctcct tactgtattt
    52501 ctcccacagc ggcttgatct cttcttccca gacgcgagga ttgagatcgc ccgcatggcg
    52561 atagcgaatg ataccgttgc cgtcaataag gaaggtttct ggcgcgccat agacaccgag
    52621 atccagccct aacatgccgt cgccatcaaa caggcttagc gcgtaaggat tgcccagctc
    52681 tttcagccag ctgattgcct tctggcgatc gtctttatag ttcatgccga ccacgcgaat
    52741 gccctgcgct gaaagctgat tcagatattg atgttccgca cggcaggtcg gacaccaggt
    52801 cgcccagacg ttaagcagca ctggtttgcc ctgagtcagc acatccgcct gataaaactg
    52861 ccccggattg tccagtgatt cgagacgaaa cttcggcaca ggcttgccaa tgagcgccga
    52921 ttccagattg gtcggatcat ccccttcggc attacgcgcc agctgccaca gcagcgccgc
    52981 ggcaatcgcc aggaagataa tcaacggaat taacaatact ttgcgcttca tacggcctcc
    53041 ggcgcagttt tttgcggact cacgcgctta cgatagcgag gatcaaacag acacagtagt
    53101 ccgcccaacg ccatcatcag cccgcccgcc caaatccagc gaacaaatgg tttgtagtaa
    53161 agacgcacgg cccacgcgcc gttttccagc tcttcaccga gcgcggcgta caggtcacgc
    53221 gtgatgccgc cgtcaattgc cgcttcggtc atcatcgacc cggcagtgtt gtaataacgt
    53281 ttttccgcat acagcaccgt ttccggcttg ccatcgcgcg ttacgccgat agtcgccaca
    53341 ccgccacgcc agttcgggcc agtcacctct ttgacatcac ggaaggtgaa gcgatattca
    53401 tgaatatcga cgctatcgcc ggacttcatg cgcacatcac gctcaacgct atagttctgg
    53461 ctaaaagcaa tgccaacaat tgtcactgcc agccccaggt gagccgccac cattccccaa
    53521 taactgaagg tggttttcgt gccacgtgaa atacgcagcg cagcttccgc aattgccagc
    53581 acagcaatcc agcaggccat tgccaggccg agcaccgtca tcgccacaac tttgctttcg
    53641 aacagccacg gcagcagcag cgacagcacc agcgttgaga tgaaggcgat aatcaataaa
    53701 ttgcggattt tacgtgggcg atcgcgcccc cagcgcacca gaggaccgac accaagcagc
    53761 agcgcaaacg gcaccatcag ccaggtaaac atggtgttga agaacggttc gccaatcgaa
    53821 atactgccca gtcccagttg cttgtgcacc agcggcagca gcgtccccag taataccacc
    53881 agcatcgcgg cgaccagcaa aacgttgttc gctaacagca gagattcccg cgaccacagc
    53941 gcattgttta cgcgtgagcg aactttgtgt ccacgcgcgg caaacagcag cagcgaacca
    54001 ccaatcacca gtaccataaa ggcgaggata aacataccgc gtgccggatc agaggcaaac
    54061 gcgtgtaccg ataccagcac gccggaacgc accaggaaag tccccagcag acacaacgag
    54121 aaggcactga ttgccagcag taatgtccac gctttgaagc tggcgcgttg ttcagtgacc
    54181 gccagtgagt gcatcagcgc agtccccacc agccacggca taaacgaggc gttttctacc
    54241 ggatcccaga accaccagcc gccccagccg agttcgtaat aggcccatgc ggaaccgagc
    54301 acaatgccga gcgtcaagaa gatccacgcc gccagcgtcc acggacgagt aaaacgcgca
    54361 taagtgctgt ccagacgccc gcacaacaaa gaagcaatgg caaaagcaaa cgccaccgag
    54421 aaacccacgt accccatata aagcagaggc ggatggaaga tcagccccgg atcctgtaac
    54481 agcgggttaa gatcgcgccc ttcaatcggg aagttcggca gcgtgcgtga gaatgggtta
    54541 gaggtaaaga gaatgaacag caaaaagccg acgctgacca tccccattat cgccagtacg
    54601 cgggccacaa tatccagcgg aatacgctga ctaaaaatcg ccaccgcaaa ggtccagccg
    54661 ctcatcagca gcacccacag caggagcgag ccttcatgcg cgccccaggt agccgccacg
    54721 cgataccaca ccggaagctg ggtattggag ttgctggcaa cataggtgac ggtaaagtcg
    54781 ttgaccacga aagcattgac cagcaccaga aatgcgccag ccacagacat aaacagcagc
    54841 caggcaaaca agcgggaaga cgccatcatg cgcgcatctc cgcgcgccac gccccatagc
    54901 ggatacacgg acagcagcag cgcaatccct aacgccaggc acagcagccc gtttccaatt
    54961 tccggcatca tgatgctggg tccttataaa cactcgccgg gcgacggtgg ttagcttcca
    55021 tcgctttctc aacttctggc ggcgtgtagt tttcgtcgtg tttcgccagc acttctttcg
    55081 cgaggatatg attgcctttt tccagctcgc cctgcaccac aacgccctgc ccttcacgga
    55141 acagatccgg caaaatgcct tggtaagaga catccactga gccttcagca tcgtaaatag
    55201 tgaaggtcac tttcagcgaa ttgggatcgc gctgcacact acccggcatc accatcccgc
    55261 caacgcgcag acgctgcccg acttccggca tttgctgagt ttcacgcttg ccgtagagaa
    55321 tttcccccgg cgtataaaag agatcgatat tcgagcgcag cgcatatagc accagaccga
    55381 tagtcagcgc cagccctgcc aacacggcac aggcaatcca caagcggttt ttacggcgaa
    55441 tattcatgca gcctcctgct gttgcgcagc acgtaaacgc gcctcacgcg cccgctgttg
    55501 cgccacacca cgcagaattg cgcgatgctg catcaccgag tgcacgacca aaaccaccag
    55561 cggaataacg gtcatcacca ccgccagcca gacaaaaaag gcgtaaccgc ccattgcgaa
    55621 aaattcattc caggaagcaa atgcaggggt catttacggc ctcttttcag tatcagttca
    55681 ctcacccacg gacggcgttt ttccatcagc aaaatcaaat tacgcatccg catcagcgtc
    55741 agcgtggcag acagcagcag gaagccaaaa atcgaccagc gcagcggcga acgcatcgcc
    55801 ggatcgatac tttgctgcat ccgcgttgat ccctgatgca gggtgttcca ccactccacg
    55861 gagtaatgaa taatcggcag attcaccacg ccaatcagca ccaggatacc tgccgcacgg
    55921 cccgccagac ggcggtcgtc gaaggcgtgc cacagggcaa tcacacccac atacaaaaac
    55981 agcagcacca gttcagaagt cagacgtgca tcccataccc accaggtgcc ccacatcggt
    56041 tttccccatg cagagccggt aaccagggca ataaaggtaa acacggcacc aatgggggcc
    56101 atcgccgcca ccgccaggtt ggccattttc atctgccaga caaggccaat aaaagccgcc
    56161 accgccattg atgcataaat gcccatcgac cagatcgccg caggcacatg caggtagata
    56221 atgcggtagc tatttccctg ctgataatca gccggagcaa agccgaatcc ccagatccag
    56281 ccgacggtaa gcacgaccac actggcaatt gccagccacg gtataaacca gccacagatt
    56341 tgatacagcc gtggtgggat cgccagttga tgcagtgttt tccacatagt ttcgatacca
    56401 gactcgaaca aaaatcagta atccagcgtt attgaatgct gattcgtaac gctgccgccg
    56461 tcgcaaaagg acttaatgtc gcggtgcctg ccagcaacgc gcctaaaatt gccagatacc
    56521 cgtcaacggg caaatgcatg gaagccgcgt ccatcgcggc ggtggcaaag atgagtaatg
    56581 ggatagtcag cggtaacacc agtatgctga gcagcacacc accgcgctta agtcccacag
    56641 tcaacgccac acccggtgca ccgagaaagc caagcgtagg cgttcccagc agcagcgtca
    56701 gcgccatcac ttgccagcca taaacatcca ttcccagtag cattgctacc agtggcgaaa
    56761 ggatgagtaa cggcagaccg gttaccatcc agtgcgccat caccttcgcc agcacaacgg
    56821 cgggcaaggg taacggcaac aacatcaatt gttcaagact gccgtcctgc aaatcgtcac
    56881 ggaacagtcg ttccagcgcc agcaaggatg aaagcagcgc agcaacccag ataatgcccg
    56941 gtgcaatacg cgccagcagt tgcggctccg gaccgatact gagcggaaaa agggtaatta
    57001 caatcaggaa gaaccacagc gggttggcga tttcggcgct atggcgaaac gctacgcgca
    57061 gctcaagacg gaaaatgcgc cagaacatca tgcggccccc gtttgcgtca gtgaaatgcg
    57121 gcgaatttta ctttcagcaa cgttgagcgg ctggtgggta gtcagaatca caatcccccc
    57181 ctgctccgta tgctgcgcca tacgctgggt cagacgatcg acgccgttaa cgtcaatcgc
    57241 ggtaaaaggc tcgtcgagga tccataacgt ggcacgggtc agccacagac gcgctaaagc
    57301 gacgcggcgt tgttgcccgg cagaaagttg atttaccgga atatcttcga atccggcaag
    57361 cccggcctgc gccagggctt ccagacattg tgcggcatcg ccatcgcgat gataaaagtg
    57421 cagattttct aacgccgtca gccgggtttt gatccccggc tgatggccta tccataacag
    57481 gttttgatgg tagctgtcgc gtacctgatg caagggctgc ccttgccaga gaacctcgcc
    57541 agcgtcaggg cgagacaacc cagtcagcaa acggagaagc gttgtcttcc ccgcgccgtt
    57601 gctaccggtg atttgtaccc actctcctgc gttcagcgta aatgacaagc cactaaataa
    57661 ggttcgttca tcccgctcac aaagtaactc tctggcttca agcataccca cgcaataacc
    57721 ctgttaaaaa cctggctcga cttcacgcat atcgggcagc ttgtgcgcta tccctttatg
    57781 gcaatcaata caggtttgcc catctttcac cgcctggtca tgcatcttcg cggcaaccga
    57841 tttctgggcg gttgtatcca tatactcgaa gttgtgacag ttacggcact cctgcgagtt
    57901 attgtccttc atgcgccgcc actcattctg tgccatcgtc agacgatgag cttcaaattt
    57961 ctgcggcgtg tcaataacgc caaaaatttt accatacagc tctttacttg ctttgagctt
    58021 gcgtatcatc ttcggcacaa actcgtgcgg aacgtgacaa tccggacagg tcgcacggac
    58081 gccgctacgg ttgttgtagt gcacggaatc catgtattcc tgatacaccg tgttgcgcat
    58141 ttcgtggcag ctaatgcaga actcttcggt attggctttt tccatcccgg tgttaaagcc
    58201 accccagaag acgatgccgc caacaaaacc gatcaacagc agcgtcccca gcgccagacg
    58261 gctgggggta cgccaccatt tccacaggcg cttaatcaga ccaggcttac ggtcagaatt
    58321 tcccataata acctcttatt tcccgtaacc ttttgatggg gtaaaggtat tccccacgat
    58381 tggcgcggta tcggcctgcg gtacgtgaca ttgcagacag aaataacgac gcggagccac
    58441 ttccgcgccc actttgccgt cgctgtccat aaagtgagta ggactgatac gcggcgcgcc
    58501 agtggtgcga taactttcga caccgtggca ctgcaagcag cggttggtat tggtcgttac
    58561 ctgataacct tcaacgctat gcgggatcat tggcggctga ttcacatagt tcagcggcat
    58621 ccgttcctgc tcttttggca tccgaatggc cccttcctgt gtcccggata cttccggcga
    58681 ctggctaaaa tcgacgccat tagccgccca aaccgcgccg cttaccacca gggccagcat
    58741 cgccgtccat tgacacagcg ctttcttcag gtcatggctt ttcatgattt cgctcccgaa
    58801 ctccatcgtg tagttattgt aaatacatcc tcagaacaga catccacgca gcgaccgcac
    58861 gtcatgcaat cgcggctggt gacctgcacc gggctttgtt catccagcac cggggcacgt
    58921 agcacatgcg gttccgggca aacatgaaaa caatccatac agcggttaca tttctgccga
    58981 tcggtggccg caacggtaat cacacctttg ctacccagca cgccatacag cgcgccaacc
    59041 ggacaaatgt gcccgcacca gccgtgttca acgaccagta gatcaaataa aaacagcgcg
    59101 agaataagca gcgcgccgct gccgaagccc attaccaggc tgcgccccat cagagatacg
    59161 gggttgatcc attcccagat gagcgtgcca gttaaggccg atcccagcag aatgaccacc
    59221 aacagcacgt agcgaatgtg gcgagggatc gtcgcagact gattgaggtc aaagcgcctg
    59281 cgtaaccagt tcgctaagtc ggtaatcggg ttcagcgggc agacccagct gcaaaataat
    59341 cgctttcccg ccagggcgta gagcacggtg ataatcaccg caccggtcaa cgccaccgtg
    59401 gcaggcagat gaccactggc aagactttgc agcgtcatca gcggatcggt cagcggaacg
    59461 gtgtcgaata acaggctact gctgtagttg ccgtgcaaga tccacacacc aaaccatgga
    59521 ccgctcaaaa acatccccag cacgaagaac tgacaaaggc gacgtaacac cagccaacgg
    59581 tgactgcgcc accagccttt tttctccagc gcctcgcgcc cggcgtcacg tttacgattt
    59641 gccattgttc ccctccagcc aaccgaagcg gtaatggtga cctaactccc ctttcgccag
    59701 tgacagcggt aacaccttga ttgccggttg ttccagcacg catacttttt cgcacttacc
    59761 gcaaccggta caggcgtcgc tgtgaaccgt cggcagaaag cgggcgtgct taccggtacg
    59821 cgtgttgcgc tccagctcca gggtgatggc ctcatcaatt ttcgggcatt cgcgataaca
    59881 aacatcgcag cgcagcccct gaaagttgag acagttttcc tggtccacca gtaccgccag
    59941 ccccatccgc gcgtcgtcga tcgattcaat ctcacgatcc agcgcaccgc ttgggcacac
    60001 tttggcgcac ggaatgtcct cacacatttc gcaaggaata tcccgtgcga caaaatatgg
    60061 cgtgcccgcc gacaggccag aagccagcgt cgccagtttt aaggtgtcgt aagggcaagc
    60121 ctgaacacac tgaccgcaac gcacacaggc actggcaaag gcgttctcgt ttatggctcc
    60181 gggcgggcgc aaccgcacgc cagatgcgcg tgcggtttgc tgttgtaacc ccagcgccac
    60241 acccacggca gccagcccgc ctgctgtgcg aacgacatcg cgcagaaagc ggcggcgacc
    60301 attttgaggt ttcgctgacc gggacataat ggcttacacc ttctccagtt tgaccgcgca
    60361 cttcttgaag tccgtctctt tcgagagcgg atcggtcgca tccagcgtca gtttgttaac
    60421 cagctgtgcg gcgtcgaaga acggcatgta caccaggccc tgtggcggac ggttacgacc
    60481 gcgcgtttca acaatcgaga tcacttcgcc acggcgagaa accactttca ctttgtcgcc
    60541 acggcgcaga tcgcgcgctt tcgcatccag cgggtgaata aacaagaccg cttccgggaa
    60601 ggcgcggtgc agttccggca cacggcgagt catactgccg gtgtgccagt gctccagaac
    60661 gcgtccggta gagagccaca ggtcgtactc ttcatccggt gcttccgccg ccggttcgaa
    60721 cggcagtgcg aagatcaccg ctttgccatc cggtttaccg tagaacttat agccttcgcc
    60781 cgctttcacg tacgggtcgt taccttcgct gtaacgccac tgtgtttctt taccgttcac
    60841 caccggccag cgcagaccgc gcgctttgtg gtagtcatcg aacggcgcga gatcgtgacc
    60901 gtgaccgcga ccaaaccatg cgtactcttc gaacagccct ttttgcagat agaagcccag
    60961 ctcgcgggat tcatcgttca gctgatcttc cgccagttcg gataccggga atttgctcac
    61021 ttcgggggtg gcatacagaa cttcgtacag cgttttgcca cgcagttccg gtttcttcgc
    61081 cagcagctct tccggccata cttcttcagt tttgaagcgg cgggagaact ggactaactg
    61141 ccagagatcc gatttcgctt cgcctggcgc ctgtacctgc tgacgccaga actgagtacg
    61201 gcgttcggcg ttaccgtaag cgccctcttt ctctacccac attgcggtcg gcaggatcaa
    61261 gtcggcggcc agcgcactga ctgtcggata cggatcggag acgatgatga agttgcgcgg
    61321 atcgcgccag cccggcatac gctcttcatt gatgttcggc ccggcctgca tgttgttggt
    61381 acacatggtc cagtaaacat tcagcttgcc gtctttcagc gcacggtctt gtgccaccgc
    61441 gtgcagaccg attttcgccg gaatggtgcc gctcgggata ttccacttct tctcacagat
    61501 atcacggtgt ttctcgttag tcaccaccat gtccgcaggc agacggtgag caaaggtgcc
    61561 cacttcacgc gcagtaccac acgcagaagg ttgcccggtc agggagaacg gaccgcaacc
    61621 cggctgggaa attttgccgg tcagcaggtg caggttgtag accaggttgt tggcccacac
    61681 accacgggta tgctggttga agcccatcgt ccagtaggag atgactttct tgttcggatc
    61741 ggcatacagc tgcgccagtt gttctaactg gtctttcggc acgccggtca tttcagcggt
    61801 tttttccagc gtatactcag caacgaaggc tttgtaatct tcaaagctca tcggttcgga
    61861 ggcgtcagaa cccggattct tcgctgcttt ttccagcgga tgggtcggac gtaaaccgta
    61921 gccgatgtcc gtcgcccctt tgcgcaggtt aacgtgcttg ctgaagaagt cctgatttat
    61981 cgcattgttt tgaatgatat agttggcgat gtagttcagg atcaccaggt cagactgtgg
    62041 cgtaaagatg atgccgttat ccgccagctc gaagctacga tgctggtagg tagaaagcac
    62101 cgccacggtg acgttctggt tagagagacg acggttagtg atgcgtgacc agaggatcgg
    62161 gtgcatctcc gccatgttag cgccccacag cacaaacgcg tcagcctgct cgatgtcgtc
    62221 atagcagccc atcggctcat ccataccaaa ggtacgcata aagccaacta ctgccgacgc
    62281 catacagtga cgtgcgttcg ggtcgatgtt gttcgaacgg aagcccgctt tgaacagctt
    62341 ggacgcggca taaccttccc agatagtcca ctgaccagaa ccgaacatac cgatcgattc
    62401 cggtcctttt tctttcaggg cggttttgaa tttctcttcc atcacatcga aggcctgatc
    62461 ccaggtgatt ggggtaaatt cgccttcttt gtcatattta ccgtttttca tacgcagcag
    62521 cggctgcgtc aaacggtctt taccgtacat gatcttgggc aggaaatagc ccttaatgca
    62581 gttcaggcca cggttaaccg gtgcgtccgg gtcgccctga caggccacca cacgcccctg
    62641 ctgcgttccg accagaacgc cgcaaccagt accgcagaaa cggcacggcg ctttatccca
    62701 tttaatggct tcctgctgac caacaacggc gcgggcaacg cccggcacgc tgagaccggc
    62761 agccgccgca gcggccgcaa cggcgttagc tttcataaag ctacgacgac tgagtttcat
    62821 ggtgtttcct caccttgctc ttcctgctgg tgataaacca gcgacaccgc cagcacgccc
    62881 tctacgttgc gtactgactc aatggtttgg atcagcgttt cgctgtcttc tgcttccacc
    62941 accacaatca actgaccgct cggcgcgtcg ctgacagcaa cttcacagcc gggaaaggcg
    63001 ttcagttggg tgctgatgtc tgaaattcgt tcgcttttgg cctgcacgac caggctgcaa
    63061 acttgccagt tagtgtgcat ggagatactc cgcagttatg gctgataccg gacagctggc
    63121 tgcacatgct ccacatccgt tgcaaagttg gctattaagt tgcggctggt agatcccgga
    63181 gagcgtcggg cgaaagatca ttgccattgg ctcacagcta tcctgacagc ggcggcattc
    63241 aactgactga tacgccaggc acgcgtcccc aatggtgaac tgcaaatccc aggccctggt
    63301 gtggcgcgga gaaaatagcg attcggggca agcctgcgcg caggcgtaac agaagcggca
    63361 ctcgttattt ttgaaattaa cgctcggata gccgcccgcg ccgcgttgca gaatgttgtt
    63421 ttcacaagca ttaatacagg cgtcgcaacg ggtgcaatgg gtcagaaaat gagattcatc
    63481 accggaccag ggtggacgga taccgttact ggctttgcgc cagcgaccag tgagtatgcc
    63541 ccgacgggat gcatcaatct tcacattgac cttccatcat taacgcgctc tgaaaattga
    63601 gagcgaccaa ataaaccgca taattaataa gccattttta tagccgctaa gatattaaag
    63661 gatgtgtcaa agatgcatac cccgatcggg gtaaaacctg tagcaggatc aaaagagtgg
    63721 cgggaagcgt ggcaaaaacg ggcttttgct cacatttca
//
LOCUS       DAPGWB010000009        61494 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.009, whole genome shotgun sequence.
ACCESSION   DAPGWB010000009 DAPGWB010000000
VERSION     DAPGWB010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 61494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 61494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..61494
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.009"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(108..2804)
                     /gene="mgtA"
                     /locus_tag="RHX79_000562"
     CDS             complement(108..2804)
                     /gene="mgtA"
                     /locus_tag="RHX79_000562"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HDV2195773.1"
                     /translation="MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTAVPPSLSAHCLK
                     MAVMPEEELWKTFDTHPEGLNQAEVESAREQHGENKLPAQQPSPWWVHLWVCYRNPFN
                     ILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVL
                     RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLP
                     VEKAATTRQPEHSNPLECDTLCFMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQES
                     EPNAFQQGISRVSMLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLP
                     MIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS
                     GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR
                     RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQ
                     GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGITVK
                     ILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLSDDELANLAQRTTLFARLTPMHKER
                     IVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLE
                     EGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVS
                     QVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPET
                     QTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIMTVIVMIVGIALPFSPL
                     ASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ"
     gene            complement(2945..2998)
                     /gene="mgtL"
                     /locus_tag="RHX79_000563"
     CDS             complement(2945..2998)
                     /gene="mgtL"
                     /locus_tag="RHX79_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_003933616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mgtA regulatory leader peptide MgtL"
                     /protein_id="HDV2195774.1"
                     /translation="MEPDPTPLPRRRLKLFR"
     gene            3183..4130
                     /gene="treR"
                     /locus_tag="RHX79_000564"
     CDS             3183..4130
                     /gene="treR"
                     /locus_tag="RHX79_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator TreR"
                     /protein_id="HDV2195775.1"
                     /translation="MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMN
                     QHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQF
                     SPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDE
                     GAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLNPVAALPGLAM
                     KQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPE
                     IVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLS"
     gene            4249..5670
                     /gene="treB"
                     /locus_tag="RHX79_000565"
     CDS             4249..5670
                     /gene="treB"
                     /locus_tag="RHX79_000565"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS trehalose transporter subunit IIBC"
                     /protein_id="HDV2195776.1"
                     /translation="MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANAR
                     PKEIEQLPMVKGCFTNAGQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARQNMK
                     WHEQLISHFAEIFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFL
                     WLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDF
                     GMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHA
                     LIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQ
                     SMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGIN
                     LKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPSYWQVFALAMVIAI
                     IIPIVLTSFIYQRKYRLGTLDIV"
     gene            5720..7375
                     /gene="treC"
                     /locus_tag="RHX79_000566"
     CDS             5720..7375
                     /gene="treC"
                     /locus_tag="RHX79_000566"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HDV2195777.1"
                     /translation="MTNLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQRLDYLHK
                     LGVDAIWLTPFYISPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMV
                     FNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYY
                     LHLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLISKDPRFPEDLDGD
                     GRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFN
                     FHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIISRFG
                     DEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELR
                     NDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAALA
                     DDSSVFYTYQKLIALRKQEAILTWGNYQDLLPNSPVLWCYRREWKGQTLLVIANLSRE
                     IQPWQPGQMRGNWQLVMHNYEEASPQPCAMTLRPFEAVWWLQK"
     gene            7769..9907
                     /gene="nrdD"
                     /locus_tag="RHX79_000567"
     CDS             7769..9907
                     /gene="nrdD"
                     /locus_tag="RHX79_000567"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HDV2195778.1"
                     /translation="MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAA
                     VVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEI
                     RGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIH
                     YHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASH
                     IYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY
                     EVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI
                     RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE
                     NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE
                     GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY
                     DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPG
                     VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDV
                     WDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY
                     LGSPDARPFNAGKQEEVKRRVKHLGNGQIG"
     gene            10065..10529
                     /gene="nrdG"
                     /locus_tag="RHX79_000568"
     CDS             10065..10529
                     /gene="nrdG"
                     /locus_tag="RHX79_000568"
                     /EC_number="1.97.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate
                     reductase-activating protein"
                     /protein_id="HDV2195779.1"
                     /translation="MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSG
                     QPFTKAMEDKIIKDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVKRIRAECPGKDIW
                     VWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR"
     gene            complement(10574..10960)
                     /gene="cybC"
                     /locus_tag="RHX79_000569"
     CDS             complement(10574..10960)
                     /gene="cybC"
                     /locus_tag="RHX79_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313240.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b562"
                     /protein_id="HDV2195780.1"
                     /translation="MRKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVIEKADN
                     AAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLAN
                     EGKVKEAQAAAEQLKTTRNAYHQKYR"
     gene            complement(11143..12495)
                     /gene="pmbA"
                     /locus_tag="RHX79_000570"
     CDS             complement(11143..12495)
                     /gene="pmbA"
                     /locus_tag="RHX79_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HDV2195781.1"
                     /translation="MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTT
                     GISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARY
                     TSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEG
                     GSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQT
                     PEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFL
                     LDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSA
                     RKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGA
                     AGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ
                     "
     gene            12589..13140
                     /locus_tag="RHX79_000571"
     CDS             12589..13140
                     /locus_tag="RHX79_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HDV2195782.1"
                     /translation="MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGA
                     EIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALD
                     KLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKE
                     GNKPPKSARQIFQYLRELAENEG"
     gene            complement(13291..14664)
                     /gene="mpl"
                     /locus_tag="RHX79_000572"
     CDS             complement(13291..14664)
                     /gene="mpl"
                     /locus_tag="RHX79_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HDV2195783.1"
                     /translation="MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEK
                     QGIELIQGYDASQLDPQPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRD
                     RWVLAVAGTHGKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEAD
                     EYDCAFFDKRSKFVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRII
                     WPENDINLKQTMAMGCWSEQELVGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLV
                     GEHNMHNGLMAIAAARHVGVAPADAANALGSFINARRRLELRGEANGVTVYDDFAHHP
                     TAILATLAALRGKVGGTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQPAHI
                     PWQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLA
                     KKAEAAQ"
     gene            14840..15838
                     /gene="fbp"
                     /locus_tag="RHX79_000573"
     CDS             14840..15838
                     /gene="fbp"
                     /locus_tag="RHX79_000573"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDV2195784.1"
                     /translation="MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAG
                     LVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEH
                     AKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVV
                     YGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVK
                     KYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYEC
                     NPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA"
     gene            complement(15871..16866)
                     /gene="yjfF"
                     /locus_tag="RHX79_000574"
     CDS             complement(15871..16866)
                     /gene="yjfF"
                     /locus_tag="RHX79_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease YjfF"
                     /protein_id="HDV2195785.1"
                     /translation="MIKRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAF
                     LGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFG
                     AFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGG
                     RLSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLST
                     GLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQG
                     LIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQR"
     gene            complement(16853..17875)
                     /locus_tag="RHX79_000575"
     CDS             complement(16853..17875)
                     /locus_tag="RHX79_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313234.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2195786.1"
                     /translation="MPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQV
                     VLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVA
                     GFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIVT
                     FNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAG
                     VNTRIIVMLTYVLSGLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMG
                     GRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGV
                     RSHDKT"
     gene            complement(17889..19391)
                     /locus_tag="RHX79_000576"
     CDS             complement(17889..19391)
                     /locus_tag="RHX79_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDV2195787.1"
                     /translation="MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGEN
                     GAGKSTLIKALTGVYHADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVA
                     DNLFIGREPKRFGFLRRKEMEKRATELMTSYGFSLDVREPLNRFSVAMQQIVAICRAI
                     DLSAKVLILDEPTASLDTQEVELLFGLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVL
                     RNGSFVGCRETRELPQIELVKMMLGRELDTHELQRAGRTLLSDKPVAAFKNYGKKGTI
                     APFDLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKQQNLRSPHQASV
                     LGIGFCPEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIRQLGIR
                     TPSTEQPIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIETLCA
                     DGLALLVISSELEELVGYADRVIIMRDRKQVAEIPLAELSVPAIMNAIAA"
     gene            complement(19701..20657)
                     /gene="ytfQ"
                     /locus_tag="RHX79_000577"
     CDS             complement(19701..20657)
                     /gene="ytfQ"
                     /locus_tag="RHX79_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactofuranose ABC transporter
                     substrate-binding protein YtfQ"
                     /protein_id="HDV2195788.1"
                     /translation="MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNV
                     AKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKD
                     AEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVG
                     ASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYA
                     HNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPA
                     FDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY"
     gene            20967..21497
                     /gene="ppa"
                     /locus_tag="RHX79_000578"
     CDS             20967..21497
                     /gene="ppa"
                     /locus_tag="RHX79_000578"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDV2195789.1"
                     /translation="MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDR
                     FMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGE
                     DAKLIAVPHTKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAE
                     AAKAEIVASFERAKNK"
     gene            complement(21577..21927)
                     /gene="chpB"
                     /locus_tag="RHX79_000579"
     CDS             complement(21577..21927)
                     /gene="chpB"
                     /locus_tag="RHX79_000579"
                     /EC_number="4.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease toxin ChpB"
                     /protein_id="HDV2195790.1"
                     /translation="MVKKSEFERGDIVLVGFDPASGHEQQGAGRPALVLSVQAFNQLG
                     MTLVAPITQGGNFARYAGFSVPLHCEEGDVHGVVLVNQVRMMDLRARLAKRIGLAADE
                     VVEEALLRLQAVVE"
     gene            complement(21921..22172)
                     /gene="chpS"
                     /locus_tag="RHX79_000580"
     CDS             complement(21921..22172)
                     /gene="chpS"
                     /locus_tag="RHX79_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin ChpS"
                     /protein_id="HDV2195791.1"
                     /translation="MRITIKRWGNSAGMVIPNILMKELNLQPGQSVEAQVSNNQLILT
                     PISRRYSLDELLAQCDMNAAELSEQDVWGKSTPAGDEIW"
     gene            complement(22385..22726)
                     /locus_tag="RHX79_000581"
     CDS             complement(22385..22726)
                     /locus_tag="RHX79_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HDV2195792.1"
                     /translation="MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGA
                     VPGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVDGLKL
                     IESGDWLDRDK"
     gene            complement(22729..26508)
                     /gene="tamB"
                     /locus_tag="RHX79_000582"
     CDS             complement(22729..26508)
                     /gene="tamB"
                     /locus_tag="RHX79_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamB"
                     /protein_id="HDV2195793.1"
                     /translation="MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVP
                     GLDIGKVTGGWRDLTLSDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQ
                     VNIDSKKMPPSEQVEEEEDSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSG
                     LNWQEKTLTLKPTSLKGLLIALPKVAEVAQEEVVEPKIENPQPEEKPLGETLKDLFSR
                     PVLPEMTDLHLPLNLNIEEFKGEQLRVTGDTDITVRTMLLKVSSIDGNTKLDALDIDS
                     SQGIVNASGTAQLSDNWPVDITLNSTLNVEPLKGEKVKLKVGGALREQLEIGVNLSGP
                     VDMDLRAQTRLAEAGLPLNVEVNSKQLYWPFTGEKQYQADDLKLKLTGKMTDYTLSMR
                     TAVKGQEIPPATITLDAKGNEQQVNLDKLTVAALEGKTELKALLDWQQAISWRGELTL
                     NGINTAKEFPEWPSKLNGLIKTRGSLYGGTWQMEVPELKLTGNVKQNKVNVDGTLKGN
                     SYMQWMIPGLHLELGPNSAEVKGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKV
                     RGTVEAPQLLADITARGLRWQELSVAQVRVEGDIKSTDQIAGKLDVRVEQISQPDVNI
                     NLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNTRFQTPVGPW
                     SLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAEGRAVVNLNRFDLAMLK
                     PFMPETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTL
                     NLTAELRNNRAELGWTIRLTNNGQFDGQVQVTDPQGRRNLGGNVNIRNFNLAMINPIF
                     TRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGMR
                     STLAGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFE
                     ATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPKTASIPINSNL
                     IVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGE
                     LLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQAALSY
                     LLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGDSSQV
                     VVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF"
     gene            complement(26505..28238)
                     /gene="tamA"
                     /locus_tag="RHX79_000583"
     CDS             complement(26505..28238)
                     /gene="tamA"
                     /locus_tag="RHX79_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamA"
                     /protein_id="HDV2195794.1"
                     /translation="MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLS
                     TIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGV
                     PVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFD
                     SEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEY
                     ESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYST
                     DVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGF
                     KRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMI
                     SRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGT
                     LGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYSNGDLKGASKLITGSLEYQY
                     NVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHG
                     LQFYIGLGPEL"
     gene            28444..29082
                     /gene="msrA"
                     /locus_tag="RHX79_000584"
     CDS             28444..29082
                     /gene="msrA"
                     /locus_tag="RHX79_000584"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDV2195795.1"
                     /translation="MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNVPDGME
                     IAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD
                     PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAA
                     MLAADDDRHITTEIANATPFYYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA"
     gene            29405..30748
                     /locus_tag="RHX79_000585"
     CDS             29405..30748
                     /locus_tag="RHX79_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDV2195796.1"
                     /translation="MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINA
                     QRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSF
                     ILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANM
                     IFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTP
                     RENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLA
                     LNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMG
                     DLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRK
                     IPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA"
     gene            complement(30810..31016)
                     /locus_tag="RHX79_000586"
     CDS             complement(30810..31016)
                     /locus_tag="RHX79_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1107 domain-containing protein"
                     /protein_id="HDV2195797.1"
                     /translation="MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKV
                     KDKLHLSVMSEVNRQVMRLQTEMA"
     gene            31341..31898
                     /locus_tag="RHX79_000587"
     CDS             31341..31898
                     /locus_tag="RHX79_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001498728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HDV2195798.1"
                     /translation="MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDK
                     DQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNT
                     DDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVARGAWQLDEKSSAVVVLDKDGRVQ
                     WAKDGALTQEEVQQVMDLLHKLINK"
     gene            complement(31888..32628)
                     /gene="cysQ"
                     /locus_tag="RHX79_000588"
     CDS             complement(31888..32628)
                     /gene="cysQ"
                     /locus_tag="RHX79_000588"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDV2195799.1"
                     /translation="MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAA
                     HTVIMDGLRTLTPDIPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNI
                     ALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHAD
                     AELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGA
                     HVHDWQGKPLDYTPRESFLNPGFRVSIY"
     gene            32818..34761
                     /gene="cpdB"
                     /locus_tag="RHX79_000589"
     CDS             32818..34761
                     /gene="cpdB"
                     /locus_tag="RHX79_000589"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HDV2195800.1"
                     /translation="MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKD
                     TATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDVHPVYK
                     ALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDT
                     EVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGAD
                     LVVVLAHSGLSADPYKVMAENSVYYLSEIPGVDAIMFGHAHAVFPSKDFADIEGADIA
                     KGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAED
                     SKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQ
                     GDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKAS
                     GKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYD
                     GECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDSHIAFASPDE
                     NRSVLAAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKG
                     QYPMNKVATDDIGFAIYQVDLSK"
     gene            complement(34890..35270)
                     /locus_tag="RHX79_000590"
     CDS             complement(34890..35270)
                     /locus_tag="RHX79_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDV2195801.1"
                     /translation="MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREG
                     THRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEK
                     VAALADWIELNLPEVLAVRDERAA"
     gene            35359..36219
                     /gene="qorB"
                     /locus_tag="RHX79_000591"
     CDS             35359..36219
                     /gene="qorB"
                     /locus_tag="RHX79_000591"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HDV2195802.1"
                     /translation="MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQ
                     GITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYT
                     SLLHAYTSPLGLADEHIETEKMLADSGIVYTLLRNGWYTENYLASAPAALEHGVFIGA
                     AGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKSVT
                     YQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDNSKTLSKLIGRPTTTLAE
                     SVSHLFNVNN"
     gene            36327..37286
                     /locus_tag="RHX79_000592"
     CDS             36327..37286
                     /locus_tag="RHX79_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709987.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV2195803.1"
                     /translation="MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLI
                     ALPIAWLGRVRLRQLARRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLP
                     VVIPVFANLLYSQRDGKLAWGKLAPALICIGIGLASVNIAELNHGLPDFDWARYTSGI
                     VLALVSVVCWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNIQ
                     TPDFSLPFGPRPLVFISLMVAIAVLCSWVGALCWNVASQRLPTVILGPLIVFETLAGL
                     LYTFLLRQQMPPLMTLSGIALLVIGVVIAVRAKPEKPLTESVS"
     gene            37400..38062
                     /gene="ytfE"
                     /locus_tag="RHX79_000593"
     CDS             37400..38062
                     /gene="ytfE"
                     /locus_tag="RHX79_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein YtfE"
                     /protein_id="HDV2195804.1"
                     /translation="MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARK
                     ELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVE
                     RVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEH
                     DEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALA
                     GE"
     gene            complement(38107..39519)
                     /gene="cycA"
                     /locus_tag="RHX79_000594"
                     /gene_synonym="dagA"
     CDS             complement(38107..39519)
                     /gene="cycA"
                     /locus_tag="RHX79_000594"
                     /gene_synonym="dagA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine/D-alanine/glycine transporter"
                     /protein_id="HDV2195805.1"
                     /translation="MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMG
                     SGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYF
                     TGWTYWFCWVVTGMADVVAITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEM
                     EFWFAMIKIVAIVSLIVVGLVMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGF
                     QIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSV
                     VPEKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA
                     FAKLSKRAVPAKGLTFSCICLLGGVVMLYVNPSVIGAFTMITTVSAILFMFVWTIILC
                     SYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFVFVVVLLTLEDDTRQALLVTPLWF
                     IALGLGWLFIGKKRAAELRK"
     gene            complement(39828..40448)
                     /gene="fklB"
                     /locus_tag="RHX79_000595"
     CDS             complement(39828..40448)
                     /gene="fklB"
                     /locus_tag="RHX79_000595"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015742582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDV2195806.1"
                     /translation="MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIAD
                     ALEGKHPAVPVDVVHRALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTES
                     GLQFRVINQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIE
                     ALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEIL"
     gene            40667..41305
                     /gene="ytfB"
                     /locus_tag="RHX79_000596"
     CDS             40667..41305
                     /gene="ytfB"
                     /locus_tag="RHX79_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YtfB"
                     /protein_id="HDV2195807.1"
                     /translation="MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVV
                     GFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQ
                     EGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVE
                     GAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR"
     gene            complement(41289..41396)
                     /locus_tag="RHX79_000597"
                     /pseudo
     CDS             complement(41289..41396)
                     /locus_tag="RHX79_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709992.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
     gene            complement(41440..42648)
                     /locus_tag="RHX79_000598"
     CDS             complement(41440..42648)
                     /locus_tag="RHX79_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV2195808.1"
                     /translation="MKRLQAFKFQLRPGGQQEREMRRFAGACRFVFNRALALQNENHE
                     AGNKYIPYGKMASWLVEWKNATETQWLKDSPSQPLQQSLKGLERAYKNFFRKRAAFPR
                     FKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNSRQVTGVVKNVTVSQSCGKWY
                     ISIQTESEVSTPVHPSASMVGLDAGVAKLATLSDGTVFEPVNSFQKNQKTLARLQRQL
                     SRRVKFSNNWQKQKRKIQRLHSRIANIRRDYLHKVTTTVSKNHAMIVIEDLKVSNMSK
                     SAAGTVSQPGRNVRAKSGLNRSILDQGWYEMRRQLEYKQLWRGGQVLAVPPAYTSQRC
                     ACCGHTAKENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLACGEMVQSGRSLKQ
                     EPTEMIQATA"
     gene            42656..43269
                     /gene="tnpA"
                     /locus_tag="RHX79_000599"
                     /pseudo
     CDS             42656..43269
                     /gene="tnpA"
                     /locus_tag="RHX79_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513092.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            complement(43174..43470)
                     /locus_tag="RHX79_000600"
                     /pseudo
     CDS             complement(43174..43470)
                     /locus_tag="RHX79_000600"
                     /inference="COORDINATES: protein motif:HMM:NF037007.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            43709..44503
                     /locus_tag="RHX79_000601"
     CDS             43709..44503
                     /locus_tag="RHX79_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HDV2195809.1"
                     /translation="MTLPTTIYSFPAYSPHFSSTDKPVKLKFHQYARATLLPNRGRDH
                     NCDGRRTVEIHKLDLSDWQAFNKLATKCNAYDGVTMNGDNSFGWNHEATLDNIHAQKY
                     NKAHAGARLTAELKYLLQDVESFEPNSKYTIHEVVLGPGYGTPDYTGQTIGYVVTLPA
                     QMPNCWSSELPTIDLYIDQLRTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNS
                     AAIYSGLGFERVPQDRDIRSDRMHLTPANHPDLWTQENGEWIYLRN"
     gene            complement(44574..45023)
                     /gene="rplI"
                     /locus_tag="RHX79_000602"
     CDS             complement(44574..45023)
                     /gene="rplI"
                     /locus_tag="RHX79_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDV2195810.1"
                     /translation="MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNI
                     EFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADA
                     VTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE"
     gene            complement(45065..45292)
                     /gene="rpsR"
                     /locus_tag="RHX79_000603"
     CDS             complement(45065..45292)
                     /gene="rpsR"
                     /locus_tag="RHX79_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012986941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDV2195811.1"
                     /translation="MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLSLLPYTDRHQ"
     gene            complement(45297..45611)
                     /gene="priB"
                     /locus_tag="RHX79_000604"
     CDS             complement(45297..45611)
                     /gene="priB"
                     /locus_tag="RHX79_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HDV2195812.1"
                     /translation="MTNRLVLSGTVCRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHR
                     QAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS
                     GD"
     gene            complement(45618..46013)
                     /gene="rpsF"
                     /locus_tag="RHX79_000605"
     CDS             complement(45618..46013)
                     /gene="rpsF"
                     /locus_tag="RHX79_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDV2195813.1"
                     /translation="MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPM
                     VKAKDERRERRDDFANETADDAEAGDSEE"
     gene            46340..46615
                     /locus_tag="RHX79_000606"
     CDS             46340..46615
                     /locus_tag="RHX79_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HDV2195814.1"
                     /translation="MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYIN
                     HNFATESEARQALNEETDAQGATYYHVILMREPGSNGNMHASADIYR"
     gene            complement(46690..47241)
                     /locus_tag="RHX79_000607"
     CDS             complement(46690..47241)
                     /locus_tag="RHX79_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HDV2195815.1"
                     /translation="MAINGLFVRTDPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPP
                     RTFSGGRDEFNPPYIFLRDYLGIDPTQTVYTFSEHIINPVMVTHIIFSLVFAIGYCVV
                     AEIFPKVKLWQGILAGLIVTVAVHGIFCPALNLTPPLTQLPFDEYASEILGHIFWFWI
                     IEIMRRDLRNRITHEPDPEVAIR"
     gene            complement(47338..48024)
                     /gene="ulaF"
                     /locus_tag="RHX79_000608"
     CDS             complement(47338..48024)
                     /gene="ulaF"
                     /locus_tag="RHX79_000608"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase UlaF"
                     /protein_id="HDV2195816.1"
                     /translation="MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSG
                     VAYETMKADDMVVVDMSGKVVEGEYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAW
                     AQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGNAEPLHTP
                     GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRK
                     HGPNAYYGQK"
     gene            complement(48024..48878)
                     /gene="ulaE"
                     /locus_tag="RHX79_000609"
     CDS             complement(48024..48878)
                     /gene="ulaE"
                     /locus_tag="RHX79_000609"
                     /EC_number="5.1.3.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase UlaE"
                     /protein_id="HDV2195817.1"
                     /translation="MLSKQIPIGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETD
                     ERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA
                     IQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYP
                     LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPG
                     VFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMA
                     KAGMVEAA"
     gene            complement(48888..49538)
                     /gene="ulaD"
                     /locus_tag="RHX79_000610"
     CDS             complement(48888..49538)
                     /gene="ulaD"
                     /locus_tag="RHX79_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HDV2195818.1"
                     /translation="MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGV
                     RAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVA
                     KEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLS
                     DMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG"
     gene            complement(49552..50016)
                     /gene="ulaC"
                     /locus_tag="RHX79_000611"
     CDS             complement(49552..50016)
                     /gene="ulaC"
                     /locus_tag="RHX79_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIA"
                     /protein_id="HDV2195819.1"
                     /translation="MKLRDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYY
                     QAILDAVEQHGPYFVLAPGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVDIL
                     ITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA"
     gene            complement(50026..50331)
                     /gene="ulaB"
                     /locus_tag="RHX79_000612"
     CDS             complement(50026..50331)
                     /gene="ulaB"
                     /locus_tag="RHX79_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIB"
                     /protein_id="HDV2195820.1"
                     /translation="MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEY
                     KSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKAHFPQDVK"
     gene            complement(50347..51744)
                     /gene="ulaA"
                     /locus_tag="RHX79_000613"
     CDS             complement(50347..51744)
                     /gene="ulaA"
                     /locus_tag="RHX79_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HDV2195821.1"
                     /translation="MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKG
                     TIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYS
                     WVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTII
                     CTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVE
                     DLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSF
                     AVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGT
                     IGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEI
                     FGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRAL
                     RAEEDAEKQLAEQSA"
     gene            52099..53163
                     /gene="ulaG"
                     /locus_tag="RHX79_000614"
     CDS             52099..53163
                     /gene="ulaG"
                     /locus_tag="RHX79_000614"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HDV2195822.1"
                     /translation="MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLG
                     CTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVL
                     DPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKER
                     CIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPG
                     GSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKV
                     VIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHY
                     PRGFDDCFTIEPDLPFKSFL"
     gene            53271..54026
                     /gene="ulaR"
                     /locus_tag="RHX79_000615"
     CDS             53271..54026
                     /gene="ulaR"
                     /locus_tag="RHX79_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HDV2195823.1"
                     /translation="MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLD
                     ESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCG
                     STAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSEN
                     SLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLF
                     SRADQIDMLITGKNANPEILQQLEAQGVSILRV"
     gene            complement(54023..54772)
                     /gene="yjfP"
                     /locus_tag="RHX79_000616"
     CDS             complement(54023..54772)
                     /gene="yjfP"
                     /locus_tag="RHX79_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HDV2195824.1"
                     /translation="MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYS
                     YFAVALAQAGLRVIMPDAPDHGSRFSGDAARRLNQFWQILLQSMQEFTTLRAAIAEEN
                     WLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFTSLARSLFPPLIPETTA
                     QQNEFNNIVAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPADESLRLQQALSETGRD
                     KLLTCSWQPGVRHRITPEALDAAVTFFRQHL"
     gene            54954..55283
                     /gene="bsmA"
                     /locus_tag="RHX79_000617"
     CDS             54954..55283
                     /gene="bsmA"
                     /locus_tag="RHX79_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313192.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm peroxide resistance protein BsmA"
                     /protein_id="HDV2195825.1"
                     /translation="MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQE
                     IRRDQTQGLQRIGSVSTMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYS
                     QAILYRK"
     gene            55432..55707
                     /gene="yjfN"
                     /locus_tag="RHX79_000618"
     CDS             55432..55707
                     /gene="yjfN"
                     /locus_tag="RHX79_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease activator YjfN"
                     /protein_id="HDV2195826.1"
                     /translation="MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVS
                     NISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA"
     gene            complement(55824..57449)
                     /locus_tag="RHX79_000619"
     CDS             complement(55824..57449)
                     /locus_tag="RHX79_000619"
                     /EC_number="1.3.8.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418608.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HDV2195827.1"
                     /translation="MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLA
                     SIGQQLGTAESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHN
                     LAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPL
                     LSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS
                     VPQSDAHLVLAQTTGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDA
                     IGWLLGQEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQ
                     PLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPF
                     VAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLS
                     EAFVEVKGQDRYFDRAVRRLQQQLRKPAEELRREITHQLFLLGCGAQMLKYASPPMAQ
                     AWCQVMLDTRGGVRLSEQIQNDLLLRATGGVCV"
     gene            complement(57533..58696)
                     /locus_tag="RHX79_000620"
     CDS             complement(57533..58696)
                     /locus_tag="RHX79_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710049.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HDV2195828.1"
                     /translation="MLRHNVPVRRDLDQIAANNGFDFHIIDNEIYWDESRAYRFTLRQ
                     IEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRM
                     DFAWCGNAPVKLLEYNADTPTSLYESAYFQWLWLEDARRSGIIPRDADQYNAIQERLI
                     SRFSELYSREPFYFCCCQDTDEDRTTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLT
                     DLDDNVIQRAFKLYPLEWMMRDDNGPLLCKRREQWVEPLWKSILSNKGLMPLLWRFFP
                     GHPNLLASWFEGEKSQIAAGESYVRKPIYSREGGNVTIFDGQNNVVDHADGDYADEPM
                     IYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG"
     gene            complement(58699..59337)
                     /locus_tag="RHX79_000621"
     CDS             complement(58699..59337)
                     /locus_tag="RHX79_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HDV2195829.1"
                     /translation="MARKRKSRNNSKIGHGAISRIGRPHNPFEPRRNRYAQKYLTLVL
                     MGGAVFLIVKGWSESGDVDNDGDGTFYSTVQDCIDDGNNADICARGWNNAKAAFYADV
                     PKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASR
                     PVWRNTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG"
     gene            complement(59347..59745)
                     /locus_tag="RHX79_000622"
     CDS             complement(59347..59745)
                     /locus_tag="RHX79_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HDV2195830.1"
                     /translation="MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNN
                     TAASLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSE
                     KIINHNTAAGMFMGTAALAGGIFNAACMTW"
     gene            complement(59763..60422)
                     /locus_tag="RHX79_000623"
     CDS             complement(59763..60422)
                     /locus_tag="RHX79_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfK family protein"
                     /protein_id="HDV2195831.1"
                     /translation="MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDEL
                     LIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYE
                     ESYGISKESHWREAINAKVMGAMILNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNH
                     AKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHII
                     G"
     gene            complement(60473..61171)
                     /locus_tag="RHX79_000624"
     CDS             complement(60473..61171)
                     /locus_tag="RHX79_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HDV2195832.1"
                     /translation="MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDK
                     AGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLEN
                     LITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTV
                     GASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSS
                     AQDVLARLQRQQGE"
     gene            complement(61190..>61494)
                     /locus_tag="RHX79_000625"
     CDS             complement(61190..>61494)
                     /locus_tag="RHX79_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HDV2195833.1"
                     /translation="NDYGDLQINILFTSRQMIIETFICPVSSISNPDEFNTFLLRNQK
                     MMPLSSVGISSVQHEEYYIVFGALSLKSSLEDILLEITSLVDNALDLAEITEEYSH"
BASE COUNT        15127 a        16499 c        15230 g        14638 t
ORIGIN      
        1 tggacgttta tttgtttttt tatttttgca gtaatttatt tttttattca ggtgttttcg
       61 taaaagactg acctgaaaga gtatttcagg ccagcctcat cacttgctta ctgccagccg
      121 taacgacggc tataaaatcc tttcaccaac tgggttaacg tcatataccc tgccaaaatc
      181 gcaaccagcc acgggaaata gcttaacggc agcgcctgca gctgcagata actggccagc
      241 ggtgaaaacg gcaatgcgat cccgacaatc atcacgatca cggtcatgat cattaacggc
      301 cacgatgcac agctctgaat aaacggcaca cggcgggtgc ggatcatatg cacaatcagc
      361 gtttgcgaca gtaagcccac cacaaaccat cccgactgga acagcgtttg cgtttccggc
      421 gtgttggcat ggaataccca ccacatcagg caaaacgtca gaatatcgaa gatcgagctg
      481 atcggtccga agaagatcat aaagcgcccc agatccgccg gattccaacg ctgcggcttt
      541 tgaatttgct cgtcgtcgac gttatcaaac gggatcgcca cctgtgacac atcatacagc
      601 aggttctgaa taagcaagtg taacggcaac atcggcagga agggcaagaa agcactcgcc
      661 accagcacgc tgaacacatt accgaagttg gagctcgccg tcattttgat gtatttcagc
      721 atgttggcga aagtgcgacg tccttcaata accccctctt ccagcaccat caggcttttt
      781 tccagcagga tgatatcagc cgcttcacgg gcaatatcta ccgcgccgtc cacagaaatg
      841 ccgatatccg cagcgcgtaa ggcgggcgca tcattaatac catcgcccat aaagccaacc
      901 acatgccctt cgcgcttcag taaggtcaca atgcgttctt tatgcatcgg cgtcaggcgg
      961 gcaaacagcg tggtgcgctg tgcgagattt gccagttcgt cgtcagatag cgtttcaata
     1021 tcactaccaa tgaccacctc tcccgcgtcc agccccactt catggcacac tttcgctgca
     1081 actaactcac tgtcgccagt aaggattttt acggtgattc cactcgcttt taatgccttc
     1141 agtgccggag cggttgtctc ttttggcgga tcaaggaaag caatatatcc ttcgaggatc
     1201 aggtcggatt catccgcccg ctggtaatct ccttcacgcg ctggcaggta tttcgtcgcc
     1261 accgcaacca cgcgcagccc ctgacgatta agcgtatcag taacccgctt aatcttacgc
     1321 agcatgatgt catcgagcgg cacaatctcg ccattgtgac gcacctgcga acacacattg
     1381 aggatttcct gcaatgcacc tttgcaaacc agctgatggt gctcggtatt ttctgccact
     1441 accaccgaca tccggcgacg ctcgaaatca aacggaatct catcaatttt ttgccaacga
     1501 ctggccagcg agcgcgctga ctcttcatcc gtaccttcga gcaccgctgt atcgagcagg
     1561 tttttaagtc cggtctgata atgactgttc aaccacgcgc tatgcagcac gcgttcgctg
     1621 gttttaccgg agatatcggt atgattctcc agcacaattt tgtcctgtgt cagggtgcca
     1681 gttttatcag tgcacagaat atccattgcg ccaaagttct gaatagcatc cagatgtttg
     1741 acgatcactt tctgtttcga cagctttact gcgccgcgcg ccagcgtcga ggtaacaatc
     1801 atcggcaaca tttccggcgt taagcctacc gcgaccgaaa gcgcaaacag tgccgcttcc
     1861 caccagtcgc ctttggtgta accattgatt aacagcacca ccggagccat caccagcata
     1921 aagcgaatca gcagcatact gacgcggctg atcccttgct gaaaggcatt cggctcgctt
     1981 tcctgctcac taacacgccc cgccagttga ccaaaccagg tattggcacc tgtagcaatc
     2041 accattgctt gtgccgtgcc gctcaccacg gtggtgccca taaaacacag ggtgtcacac
     2101 tccagcggat tgctgtgctc cggctggcga gtggtagcgg ctttttctac gggcagagac
     2161 tcaccggtta acgacgcctg agcgacgaac agatcccgcg cctgcaagat acgtaaatct
     2221 gccgggatca tatcccccgc cgccagtttt attatatcgc cgggcaccag ctggtcgatc
     2281 gggatctcca gccagccatt ttcgcctttg tcgttaatta cgcgcagaac cgtcgctgta
     2341 ttgctgacca tcgctttcag ggcatctgcc gctttagtgg aacgtgcttc ctgaataaag
     2401 ttcagcaacg tagaaatagc gaccattagc gcgataacgc ccgcggcaaa taaatcttcc
     2461 gtggcgtaag aaatagcgcc gagaatggtg agtaaaatat taaaggggtt gcgatagcag
     2521 acccataaat gtacccacca cggcgacggt tgttgtgcgg gtaatttatt ttcaccatgt
     2581 tgttcgcggg cagattccac ttccgcctga tttaaccctt ccggatgggt gtcgaacgtt
     2641 ttccataatt cttcttcggg catcaccgcc attttcaggc aatgcgcact taaggacggc
     2701 gggaccgccg tattcactgt ctgctgcgcg ccaggcaatg gatcgcgatg aaccagacgg
     2761 gaaggtaaat ggcgaatgag ccgggtaaaa atttctttaa acataaggag tccctccgca
     2821 ctgtctgaaa cagtacagaa atgtcttcag gcgtggcgaa gccttacctg aaggtaataa
     2881 agctgagcag ggacgttaaa acgtcacggc cttacgcatc cggtaacgcc gtgaaaagac
     2941 gggcttaccg gaaaagtttt aatctccgtc gagggagagg cgtgggatca ggttccatat
     3001 aacctccggt aagtgaaaaa agcgccgcaa ataataagga gaatccaata atattcgtag
     3061 catctatggc gatataatac ctgctggcaa ctaaaccaac gataaaccag actttaccca
     3121 ttgctgaatg cacgggtaaa gttaggctca aataattaaa caacacgtta caggacaaca
     3181 ggatgcaaaa tcggctgacc atcaaagaca tcgcacgctt aagcggcgtg gggaaatcta
     3241 cagtttcccg ggtgctgaat aacgaaagcg gcgtgagcca gcgcacccgc gagcgtgttg
     3301 aagcagtgat gaatcagcat ggattttccc cttcccgctc tgcgcgcgct atgcgtgggc
     3361 aaagcgataa agtggtcgcc atcattgtta cccgcctgga ttcgttgtca gaaaatctcg
     3421 ccgttcaaac catgctgcca gcgttctatg aacaaggtta cgacccaatc atgatggaaa
     3481 gtcagttttc cccgcaatta gttgccgaac atttgggggt gctgaaacgg cgtaatatcg
     3541 acggcgtagt gctgttcggt tttactggca taacagaaga aatgttagcc cactggcagt
     3601 catcgctggt tctgctggcg cgtgacgcaa aaggttttgc ttcggtctgt tatgacgacg
     3661 aaggggcaat caagatcctg atgcaacggc tgtatgacca ggggcatcgt aatatcagtt
     3721 atctcggcgt gccgcatagt gacgtgacga ccgggaagcg acgtcacgaa gcctacctgg
     3781 cgttctgcaa agcgcataaa ctgaatcccg ttgccgctct gccaggcctt gctatgaagc
     3841 aaggctatga gaacgtagca aaagtgatta cgcctgaaac taccgcctta ctgtgcgcaa
     3901 ccgacacgct ggcacttggc gcaagtaaat acctgcaaga gcaacgcatc gacaccttgc
     3961 aactggcgag cgtcggtaat acgccattaa tgaaattcct tcatccggag atcgtcaccg
     4021 tagatcctgg ttacgccgaa gctggacgcc aggcggcctg ccaattgatc gcacaggtaa
     4081 ccgggcgcag cgaaccgcaa caaatcatca tccccgccac cctgtcctga tcgtttcctg
     4141 aacgataaat tgtgatcttc gctgcgtttc gggaacgttc ccgtttttaa atttttccgc
     4201 gcaatatatt ctgcagccaa ccaaaaatgt catctgccat ggggctttat gatgagcaaa
     4261 ataaaccaaa cggatatcga tcggttgatt gaactggtcg gcgggcgcgg caatattgcg
     4321 acggtgagcc actgtattac tcgcctgcgc tttgtcctca accaaccggc caatgccaga
     4381 ccgaaagaaa ttgagcaact ccccatggtg aaaggctgtt tcaccaatgc cgggcaattt
     4441 caggtggtga ttggcaccaa cgtgggtgat tactatcaag cactaatagc gtcaaccgga
     4501 caggcgcagg ttgataaaga gcaggtaaaa aaagccgccc ggcagaatat gaaatggcat
     4561 gagcagttga tctctcattt cgcggagatc ttcttcccgt tgctgcccgc gttgattagc
     4621 ggcggtttga tcctcggttt tcgtaatgtg atcggcgatt tgcccatgag caacggtcaa
     4681 acgctggcgc aaatgtaccc ttccctgcaa acgatctacg attttctgtg gttgatcggt
     4741 gaagcgatct tcttctacct gccggtcggg atttgctggt cagcggtgaa aaaaatgggc
     4801 ggcacgccga tccttggtat cgtgcttggc gtgacactgg tttcccccca gctgatgaac
     4861 gcttatctgc tcgggcagca gctgccggaa gtgtgggact ttggcatgtt cagcatcgcc
     4921 aaagtgggct atcaggcgca ggtgatcccg gcactgttag ccgggctggc gctgggcgtt
     4981 attgaaactc gccttaaacg catcgtaccg gattacctct atctggtggt ggtgcccgtc
     5041 tgttcgctga tcctcgcggt gttcctcgcc catgcgctga ttggtccgtt tggtcgcatg
     5101 attggcgatg gcgttgcctt tgcggtacgt cacctgatga ccggcagctt tgctccgatt
     5161 ggtgcggcat tgtttggctt cctgtacgcg ccgctggtga tcaccggcgt acaccagacc
     5221 acccttgcta ttgatttgca gatgattcaa agcatgggtg gcacgccagt gtggccgctg
     5281 attgcgctgt cgaatatcgc tcagggctcc gccgtgatag gcattatcat ttccagccgc
     5341 aagcacaatg aacgcgagat ctccgtgcct gccgctatct ccgcctggct tggggtcact
     5401 gagcctgcaa tgtacggcat caacctgaaa tatcgcttcc cgatgctgtg cgcgatgatt
     5461 ggttctggtc tggcaggatt actatgcggc ctgaacggcg ttatggcgaa tggtatcggc
     5521 gtaggcggcc tgccgggaat tctctcgatt caaccgagct actggcaggt atttgcgctg
     5581 gcaatggtta tcgccatcat catcccgatt gtactcacct cgtttatcta tcagcggaaa
     5641 taccgcctgg gcacgctgga tattgtttaa ttttcttcgg ggcgcaattg cgccccctcg
     5701 catttgcagg aataacgtaa tgactaatct tccccactgg tggcaaaacg gcgttatcta
     5761 ccagatttat ccaaagagtt ttcaggacac cacgggtagc ggcaccggcg atttacgtgg
     5821 cgttatccaa cgcctggact atctgcataa actgggcgtt gatgccatct ggctaacccc
     5881 cttttatatc tctccccagg tcgataacgg ttacgacgta gcgaactata cggcgattga
     5941 tcccacctac ggcacgctgg acgattttga cgaactggtg acgcaggcaa aatcgcgcgg
     6001 gattcgtatc attcttgata tggtgtttaa ccatacctct acccaacatg cctggtttcg
     6061 cgaggcgctg aacaaagaaa gcccttaccg ccagttttat atctggcgcg atggcgaacc
     6121 agaaacgcca ccgaacaact ggcgttcaaa atttggcggt agtgcgtggc gctggcatgc
     6181 ggaaagcgaa cagtactatt tgcatctctt tgcaccagaa caggcggatc tcaactggga
     6241 gaatccagcg gtacgcgcag agctgaaaaa agtctgtgaa ttctgggccg atcgtggggt
     6301 cgacgggttg cgcctggatg tggtgaatct gatctccaaa gacccgcgtt tccctgaaga
     6361 cctggatggc gacgggcgtc gcttttacac cgacgggcca cgagcacacg agtttttgca
     6421 cgagatgaac cgcgatgtgt ttacgccacg cgggttaatg accgtaggtg aaatgtcctc
     6481 caccagcctt gagcattgcc agcgatacgc ggcactgaca ggcagtgaat tgtcgatgac
     6541 ctttaatttt catcacctga aggtcgatta tcccggtggt gaaaaatgga cgctggctaa
     6601 acctgacttt gtggcgttga aaacattgtt ccgccactgg caacaaggaa tgcacaacgt
     6661 ggcatggaat gccttgttct ggtgtaacca cgatcagccg cgcattattt ctcgctttgg
     6721 tgatgaaggt gaataccgcg tgcctgcggc aaaaatgctg gcgatggtgc tgcatggcat
     6781 gcagggaacg ccgtatatct accagggcga agagattggc atgaccaacc cgcatttcac
     6841 gcgcattact gactatcgcg acgtggagag cctcaatatg tttgccgagc tgcgcaacga
     6901 tggtcgtgat gccgacgagt tattggcaat cctcgccagt aaatcccgtg acaacagccg
     6961 cacgcccatg caatggagca acggcgataa tgccgggttt acggctggcg aaccgtggat
     7021 tggcctgggc gataactatc aacaaatcaa cgtagaagcc gcgctggccg atgactcctc
     7081 ggtgttttac acctaccaaa agttaatcgc actgcgtaag caagaagcca tcctgacatg
     7141 gggcaattac caggatctgc tgccaaacag ccctgtattg tggtgctatc gccgtgaatg
     7201 gaaggggcaa accttgctgg tcattgccaa ccttagccgt gagatccaac cctggcagcc
     7261 agggcaaatg cgcggcaact ggcagcttgt gatgcataac tacgaagaag cctcaccaca
     7321 accctgtgcc atgactttac ggccttttga ggctgtctgg tggttacaga agtaagtatc
     7381 cgctaagccc cgggaatgcc tgtcattccg gggttttgtc tgtcagcatg ttgtttttgt
     7441 tgatttttca accagcaaat tcattaaaaa atttacataa cgctgtagcg cccgtcatcc
     7501 gtacgctctg ctttttactt tgagctacat caaaaaaagt tcaaacatcc ttgatgcaaa
     7561 gcactatata tagactttaa aatgcgtccc aacccaatat gttgtattaa tcgactataa
     7621 ttgctactac agctccccac gaaaaaggtg cggcgttgtg gataagcgga tggcgattgc
     7681 ggaaagcacc ggaaaacgaa acgaaaaaac cggaaaacgc ctttcccaat ttctgtggat
     7741 aacctgttct taaaaatatg gagcgatcat gacaccgcat gtgatgaaac gagacggctg
     7801 caaagtgccg tttaaatcag agcgcatcaa agaagcgatt ctgcgtgcag ctaaagcagc
     7861 ggaagtcgat gatgccgatt attgcgccac tgttgccgcg gttgtcagcg agcagatgca
     7921 gggccgcaac caggtggata tcaacgagat ccagaccgca gttgaaaacc agctgatgtc
     7981 gggtccatac aaacaactgg ctcgtgctta catcgagtac cgtcacgatc gcgacattga
     8041 acgtgaaaaa cgcggtcgcc tgaaccagga gatccgtggt ctggtcgagc agaccaacgc
     8101 ctcgttactc aacgaaaacg ccaacaaaga cagcaaggtg attccaaccc agcgcgacct
     8161 gctggccggg atcgtggcta aacactatgc acgccagcac ctgctgccgc gtgacgtggt
     8221 gcaggcacat gagcgtggcg atattcacta tcacgatctc gattactcgc cgttcttccc
     8281 gatgttcaac tgcatgttga tcgacctgaa aggcatgctg acccagggct ttaaaatggg
     8341 gaacgccgag attgaaccgc cgaagtcgat ctctacggca accgcggtaa ctgcgcagat
     8401 tattgctcag gtcgccagcc atatttatgg cggcaccacc attaaccgta tcgatgaagt
     8461 gctggcgccg tttgttaccg ccagctacaa caaacatcgc aagaccgcag aagagtggaa
     8521 catcccggac gccgaaggct acgcaaactc tcgtaccatc aaagagtgct acgatgcctt
     8581 ccagtcgctg gagtacgaag taaacaccct gcacaccgcc aacggtcaga cgccgtttgt
     8641 aacctttggt tttggtctgg gcaccagctg ggaatcgcgc ctgattcagg aatcgatcct
     8701 gcgtaaccgt atcgcaggcc tcggtaaaaa ccgtaaaact gcggtgttcc cgaaactggt
     8761 gtttgcgatt cgcgatggtc tgaaccataa aaaaggcgat ccgaactacg acatcaaaca
     8821 gctggcgctg gagtgcgcaa gcaagcgcat gtatccggat atcctgaact acgatcaggt
     8881 agtgaaagtc accggttcgt ttaaaacccc gatgggctgc cgcagcttcc tcggcgtgtg
     8941 ggaaaatgaa aacggcgagc agatccacga tggtcgtaac aacctcggcg tgatcagcct
     9001 gaacctgccg cgtattgctc tggaagcaaa aggcgatgaa gccaccttct ggaagctgct
     9061 ggatgaacgt ctggtgctgg cacgtaaggc gctgatgacc cgtatcgctc gtctcgaagg
     9121 cgtgaaagcg cgcgtggccc cgatcctcta tatggaaggt gcttgtggcg tacgtctgaa
     9181 tgctgacgat gatgtttctg aaatcttcaa aaacggtcgt gcgtctattt cgctgggtta
     9241 catcggcatc cacgaaacca ttaacgcgct gttcggcggc gagcatgttt acgacaacga
     9301 gcagcttcgc gcgaaaggta tcgccattgt tgaacgtctg cgccaggcag tggatcagtg
     9361 gaaagaagaa acgggttatg gtttcagtct ctacagcacg ccgagtgaaa acctgtgcga
     9421 ccgcttctgc cgtctcgata ctgctgagtt tggcgtggtg ccgggcgtga ccgataaagg
     9481 ttactacacc aacagtttcc accttgatgt ggagaagaag gtgaacccgt acgacaagat
     9541 cgactttgaa gcgccttacc cgccgctggc gaacggtggt ttcatttgct acggcgagta
     9601 tccaaacatt cagcacaacc tgaaagcgct ggaagatgtc tgggattaca gctatcagca
     9661 tgtaccgtat tacggcacca atacaccgat tgatgagtgc tacgagtgtg gctttaccgg
     9721 tgagttcgag tgcaccagca aaggcttcac ttgcccgaaa tgtggtaacc atgacgcctc
     9781 ccgtgtgtcg gtaactcgcc gcgtgtgcgg atatttaggt agcccggatg cacgtccgtt
     9841 taacgctggt aagcaggaag aagttaagcg ccgcgttaaa catttgggga atgggcagat
     9901 aggttaatct tcactctgcg ctaagcaaat gccggatgcg gcgtaaacgc cttatccggc
     9961 ctacatttgg caacggctgt aggcctgata agacgcgaca gcgtcgcatc aggcattgat
    10021 taccggatgc agcctacacg cggactgata agccaggcga aataatgaat tatcatcagt
    10081 actatcctgt cgacatcgtc aacggccccg gcactcgctg caccctgttt gtctccgggt
    10141 gtgttcatga atgccccggt tgctataaca aaagcacatg gcgggtaaat tctggtcagc
    10201 catttaccaa agcaatggaa gacaagatca ttaaagatct gaatgacact cgtatcaaac
    10261 gccaggggat ttccctctcc ggcggcgatc cgctgcatcc gcaaaacgtg ccggatattc
    10321 tgaaactggt aaaacgcatc cgcgccgagt gtccgggtaa agacatctgg gtgtggacag
    10381 gctataaact cgacgaactc aacgctgcgc aaatgcaggt tgttgatttg attaacgtgc
    10441 tggtcgacgg caaatttgtg caggatttaa aagacccttc cctgatctgg cgcggcagca
    10501 gcaatcaggt ggtgcatcat ttgcgatgat aagttccctg ttacctgagt gcaggcaaca
    10561 gggaaatgag gaattaacga tacttctggt gataggcgtt gcgggtcgtt ttcagttgct
    10621 ctgcagcagc ctgcgcttct tttactttac cttcatttgc cagcttcagc gcgtcgtcaa
    10681 tctgaccgac cagaatgtcg aaaccgtggc ggaaatcttt catttccggg ctgtccggtg
    10741 atttatcttc gagcttcggc ggcgttgctt tttgcgcatc cagcgctgcg gcgcgcatct
    10801 tcgttaacgc gtctttgact tgcgccgcgt tatccgcttt ttcgatcact tttaaattgt
    10861 cgttgagggt ttccatattg tcttcaagat cagcggcaaa cgacgcagaa ctgaatacca
    10921 acgaggagac tgcaagaata gctaacaggc ttttacgcat tgctcacttc cttttttatt
    10981 tacacttcat ccttcacact gcctcatcga cggctacgct cattcgcccg ggtcacgtac
    11041 tgcgagtacg ctccccggcc ctcattcact ttccgtctcg atgcagtgcg aatgattttg
    11101 tgtaattttt tagtttatag cgcggcaggt cgcgccagtt ttttactgcc cggcgatttt
    11161 catctccggc aacagcacag aaccacactg tatattactg cgtgtttcaa tatcgttacc
    11221 gacggtgaca atattgcgcc acatatcttt taaattacct gcgatggtga tttcactaac
    11281 gggatactga atttcgccat tctctaccca gaagcccgct gcaccacggg aataatcacc
    11341 ggtaatggca ctcacgccct ggcccatcag ctccgtcacc accagcccgg tgcccatctc
    11401 tttgagcatt tgttcgaagc ttagcccttg tccggcaatc cgccagttgt gaataccgcc
    11461 cgcatgtccg gtgcttttca gccccagttt ccgcgccgag tagctggtca gcagccactg
    11521 agtcaggatg ccatctttaa taatatcgcg acgctcggtg cgcacacctt cgctgtcgaa
    11581 tggcgtcgac gccagccctt tcagcagatg cggatgctct tcaatggtca gccagtccgg
    11641 cagaatttgt ttacccagcg aatccagcag aaaggtagat ttacggtaaa ccgagccacc
    11701 cgctatcgcc cccaccagat ggccaaaaag cccggttgcc acttcattgg caaaaatgac
    11761 cggcgctttc atggtggaga gtttacgcgg tgacaggcgc gataaagtac ggcgagcaca
    11821 gtcggcccca acccactctg gcgtttgcag atcgctcatc gcacgaccaa tggtgtaggc
    11881 gtaatcacgc tccatatcgc cattttcttc ggcaattaca cagctggaga gtgaatgacg
    11941 cgtagagcag taaccctgca acatgccgtg gctgttgcca aaaactttga caccgtagtg
    12001 gctgttaaaa ctgccgcctt cggtattggt aatgcgtttg tccgcctgca atgccgcctg
    12061 ttctgcgcgg gccgccagtt caatggcttc atccggggaa acttccgcag ggtggaacaa
    12121 gtcgagatct ggtgcgtcaa aggccagcag ctctttgtct gccacgccgg cacagggatc
    12181 tggcgaggta taacgggcaa tatccagcgc cgcctgtacg gtgcgggcaa tggcctgcgg
    12241 gcttaaatcg gtggatgatg cgctaccttt gcggttctgg tgataaacag tgatccccag
    12301 cgcgccatcg ctattgaatt caacattctc cacttcacca taacgcgtgc ttacgctaat
    12361 gccggtggtc ttgctgacgg caacttccgc accgtccgat ttgcctgagg ccaactccag
    12421 cgcagtggaa actgcttctt ccagaatctt gcgctgcgct tcaacttgag agattacttt
    12481 cattgcaagt gccataatgt agagagtttc tctgaagtct aacagagaac cgtttttcag
    12541 tgcgcatctt aactggtaac attagcctct ttttttaagg agcctgagat gactaagcag
    12601 cccgaagact ggctcgacga cgttcccggt gatgacatcg aagacgaaga cgatgaaatt
    12661 atctgggtca gtaaaagtga aattaaacgt gatgccgagg agctaaaacg ccttggcgcg
    12721 gaaattgttg atctggggaa aaacgcgctg gataagatcc cgttagatgc ggatctgcgc
    12781 gcggctattg agctcgccca gcgtattaag atggaaggtc gccgccgcca gttgcagctc
    12841 atcggtaaga tgctgcgcca gcgcgacgta gagcctattc gtcaggcgct ggataagctg
    12901 aaaaaccgtc acaaccagca ggtggtgctg ttccataaac tggaaaacct gcgcgatcgt
    12961 ctgatcgatc aaggtgatga cgccatcgct gaagtattga atctgtggcc cgatgccgat
    13021 cgtcagcagc tgcgtactct gatccgtaac gcgaagaaag agaaagaagg gaataagccg
    13081 ccgaaatccg cacgccagat tttccagtat ctgcgcgaac tggcggagaa tgaagggtaa
    13141 ttttcgttgt tgatgtgagt atggtttgcc ggatgcggtg cacctgtagg ccggataaga
    13201 cgcatcaagc gtcgcatcag gcactatgct caaatgccgg atgcggcgta aacgccttat
    13261 ccggcaatgc tatctcaggc tgaggccgaa ttactgcgca gcttccgcct tcttcgccag
    13321 accatccagc agtttctgat ggatcccacc aaaaccgccg ttgctcatga ccagaatatg
    13381 gtcgccaggc tgagcggttt tcaccaccat atctgccagc gtatccacat cgccactcca
    13441 gtgtgcaggc tgaacgcagg cttctgccac ttctgccacc tgccacggaa tatgcgccgg
    13501 ttgcagcagg aagacttcat cggcacgacc taatgaaggt gccagatcgt ctttgcagat
    13561 ccccattttc atggtattcg agcgcggctc cagcacagca ataatgcgcg ccgtaccacc
    13621 aactttgcca cgcagcgccg caagcgttgc cagaattgcc gtcgggtgat gggcaaaatc
    13681 gtcatatacc gtcacgccat tcgcttcacc acgcaactcc agacggcgac gagcgttaat
    13741 aaacgaaccc agcgcgttag cggcatctgc aggcgctaca ccaacatggc gagccgccgc
    13801 aatcgccatc aggccattgt gcatattatg ttcgcccacc agcgaccatt tcacttcgcc
    13861 cactttttcg ccatccagca agacttccca ttcagaagcg tcagtggtca gctttttcgc
    13921 ctgccagtga ccctgctcac ccaccagctc ctgctcgctc cagcagccca tcgccatggt
    13981 ctgtttcagg ttgatgtcat tttccggcca gataatacgg ccctgccccg gaacgatacg
    14041 caccagatgg tggaactgtt tctggatcgc tttcaggtcg tcaaagatat cggcgtgatc
    14101 gaactcaagg ttgttgagga tcagcgtacg cgggcagtaa tggacaaatt tagagcgttt
    14161 gtcgaagaag gcgcagtcat actcatccgc ttcgataaca aagaagtcgc tttcgcccag
    14221 acgcgccgaa acctcaaagt tccccggcac accgccgatc acaaatcccg gtttgtaacc
    14281 gcactgttcc agaatccagg tcgccattcc cgcggtggta gttttgccgt gtgtaccggc
    14341 aacggccagc acccagcggt cgcgcagcac aaaatcgtgc agccactgtg gacctgacat
    14401 ataagggatg tttttttcca gtaccgcttc cacacacgga tttccacggg tcatggcgtt
    14461 gccaataatc accagatccg gctgcggatc gagctggctg gcatcgtaac cctgaatcag
    14521 ctcaatgcct tgcttctcaa gtaaggtgct catcggcgga tacacattgg cgtccgaacc
    14581 cgttacttca tggcctaact ggcgcgccag catcgccaga ccgcccataa atgtgccaca
    14641 aattcctaaa atatgaatgc gcatacgtca ctatcctttt ttaatctgcc gctcatttta
    14701 cgcatatgtc gggcaagtga gaaacgcatt tcaggataat ccgcaatttg ctggcgcgat
    14761 tcacctgagc gcaacattga gattatttgt taagattgtt gcggtcgctt tactccataa
    14821 acattgcagg gaaagtttta tgaaaacgtt aggtgaattt attgtcgaaa agcagcacga
    14881 gttttctcat gctaccggtg agctcactgc tttgctgtcg gcaataaaac tgggcgccaa
    14941 gattatccat cgcgatatca acaaagcagg actggttgat atcctgggtg ccagcggtgc
    15001 tgagaacgtg cagggcgagg ttcagcagaa actcgacttg ttcgctaatg aaaaactgaa
    15061 agccgcactg aaagcacgcg atatcgttgc gggcattgcc tctgaagaag aagatgagat
    15121 tgtcgtcttt gaaggctgtg aacacgcaaa atacgtggtg ctgatggacc ccctggatgg
    15181 ctcgtccaac atcgatgtta acgtctctgt cggtaccatt ttctccatct accgccgcgt
    15241 tacgcctgtt ggcacgccgg taacggaaga agatttcctc cagcctggta acaaacaggt
    15301 tgcggcaggt tacgtggtat acggctcctc taccatgctg gtttacacca ccggatgcgg
    15361 tgttcacgcc tttacttacg atccttcgct gggcgttttc tgcctgtgcc aggaacggat
    15421 gcgcttcccg gagaaaggca aaacctactc catcaacgaa ggaaactaca ttaagtttcc
    15481 gaacggggtg aagaagtaca ttaaattctg ccaggaagaa gataaatcca ccaaccgccc
    15541 gtatacctca cgttatatcg gttcactggt cgcggatttc caccgtaacc tgctgaaagg
    15601 cggtatttat ctctacccaa gcaccgccag ccacccggac ggcaaactgc gtttgctgta
    15661 tgagtgcaac ccgatggcat tcctggcgga acaagcgggc ggtaaagcga gcgatggcaa
    15721 agagcgtatt ctggatatca tcccggaaac tctgcaccag cgccgttcgt tctttgtcgg
    15781 caacgaccat atggttgaag atgtcgaacg ctttatccgt gaattcccgg acgcgtaatc
    15841 tcctgcgcct ctccacacgg agaggcgttt ttatcgctgc gcaatattga ctcttgtcac
    15901 tggcgaactc tgacgattct cccacagcac cgttaatcca cgctgtaagg caataaaaat
    15961 gaacagcaaa atgccgatgg cgattttcgt ccaccaggaa ctcagcgtac cgtcaaagtt
    16021 gatataagtc tgaattagcc cctgaatcgc cacgccaaaa agcgtcccta ataccgttcc
    16081 aacgccaccg ctcaaaagcg taccgccaat taccactgag gcgatagcat ccagttccac
    16141 acctacgccc gccagcgcat atccggcctg ggtataaatc gagaagacaa tccccgccag
    16201 cgttgccagt ccggtggaga gcatataaat gcgaatagtg gtgctgcggg tagaaatccc
    16261 catcaggttt gccgacgttg cgttgccgcc aatggcgtat acctgattac caaaacgggt
    16321 acgatgcgcg aggaatatgc cgataaccac caccgccagc atcagcagtc ccatcgcact
    16381 taagcgaccg ccgccaggga ttttccacgc aaggcttgag agcgtgtcat aaatgggatg
    16441 gtttatcggg atcgactctt ctgaaacgag atagctgacg ccgcgcaaaa agaacattcc
    16501 tgccagggta atgataaatg ccgggatctt cagggcgtcg atcaaaagcc ccataaatgc
    16561 gccaaaggca cagcccatca ccagcactag cggaaacgcc agcagcggcg agaggccgaa
    16621 atcgccaatc acttttgcca gaaacacgcc agtaaaggcg atcaccgaac cgacggagag
    16681 atcgataccg ccagagagga tcacaaaggt catgccaacg gcgattatcc caagaaaggc
    16741 gttatcggtc aggatattgc agatcactct tgtggaagca aaaccgggaa actgggtcag
    16801 gcagtagaga tagcccagca caaagacgcc gatggtgatc atcagcggca agttacgttt
    16861 tatcatggct acgtactcct ttaatcagac tgataaagcg ttgcgactga acaatcagca
    16921 cacaaagcac caccaccgct tttacgacct ggttcatctc cggcggaaag ccagaaagta
    16981 aaattccggt gttcatcccc tgaataatca gcgcccccac gactgagagc agcaggttaa
    17041 agcgcccgcc catcagcgat ccgccgccaa tcaccaccgc aagaatggcg tccagctcca
    17101 gccataaccc ggcgttattg gcatcggcac cgcgaatatc cgccgccacg ataatgcccg
    17161 caatcgccgc acacagcccg ctcaacacgt aggtgagcat gacgatgatc cgcgtgttta
    17221 ccccggcatt ttttgccgcc cgaatgttga taccaacggc ttcgataaac atccccagcg
    17281 ccgttttgcg ggtcaacagc cagaacagga gaagcgtcag caccgcgata atgaccggcg
    17341 ttggcaggaa caacagcgat ccgctgccaa accatgagag atccggcgag ttaaacgtga
    17401 cgatctgccc ggcggtgatc agttgcgcca cgccgcgccc ggcgaccatc aggatcaggg
    17461 tggcgacaaa cggctgaatt ttgaggatcg ctaccagtat gccgttccac aatcccgcca
    17521 ggatgccggt gcccagggcg cttaacaaaa caatcggcag gctgaatccc gcgaccgtca
    17581 tcgcagccgt tgtggctccg gcgatagcca tcaccgcccc tacggagaga tcaatcccac
    17641 cggtggcgat caccagcgtc ataccaatcg ccagtaacgc aacgggagct gcacggttaa
    17701 gaatgtcgat agggctaccg aacaaacgcc catcctgaag caccacctgc cagaaatgcg
    17761 gggctaccag gctatcgacc agcagcacca gcaatagcgc cgccagctgc ggcattcccg
    17821 ttggccagcg aaagcgcctt ttcggcggcg tagtgtccgg gagagattga ggcatcacac
    17881 tgttctcctt acgccgcaat ggcgttcatg atcgccggaa cggaaagctc tgccagcggg
    17941 atctccgcca cctgtttgcg atcgcgcatg ataatcaccc gatcggcata gcccaccagc
    18001 tcttccagtt cggaggagat caccaacagc gccagaccgt cagcacacag cgtttcaatc
    18061 aggcggatga tctcggcgtg ggcaccaaca tcaatgccgc gggttggctc gtcgaggatc
    18121 agaaattgcg gtcgggtcag tagccaacgt gaaagcaaca ctttttgctg attgccgcca
    18181 gagagaaatt caatcggttg ttcagttgaa ggtgtgcgaa tgccaagctg gcggataaag
    18241 cgttcggcaa tctcttgctg ctctttgcgg gaaatgggtc gtagccagcc gcgctgggcc
    18301 tggagagcga ggatgatatt ttcccgtacc gaggcggcgg cgatgatgcc atcggttttc
    18361 ctgtcttccg ggcagaagcc gatgcccagt accgaagcct gatgtggcga tcgcaggttt
    18421 tgctgtttgc ctttgatcaa cgccgtgccg ctgtcagcag gtttgatacc gaagatcact
    18481 tcggcggttt cggtacgtcc ggatcccagc aagcctgcca ggccgacgat ctcgccgggg
    18541 cgtacttcga gatcaaacgg tgcgatcgtt ccttttttgc cgtaattttt gaacgcggca
    18601 acgggtttgt cgctcaacaa tgttcgcccg gcacgctgta gctcgtgggt atccagctcg
    18661 cgccccagca tcatttttac cagttcgatc tgcggtagct cgcgcgtttc ccgacagcct
    18721 acgaaactgc cgttgcgtaa gacggtgatc cgatcgctga cctgatagac ctgatcgaga
    18781 aagtgagtga caaagatcag gctgacgccg cgatcgcgca actgacgcat caggccaaac
    18841 agtaactcta cttcctgggt gtcgaggctg gcggtgggtt catcgaggat cagcactttg
    18901 gcggagagat cgatagcccg gcaaatggcg acgatttgct gcatcgccac cgaaaaacgg
    18961 ttaagcggtt cacgcacgtc gagggagaaa ccgtaagatg tcatcagttc ggtggcacgc
    19021 ttttccatct ctttgcggcg tagaaagccg aaacgtttgg gttcgcgacc tatgaataga
    19081 ttatcagcga ccgacatatt gggtagcagg ttgacttcct gataaacggt tccgatgccg
    19141 agttgttgtg catgggcggt atttttcggt gagatagcct ggccttccag ccagatggtg
    19201 ccgcgatcgg cgtggtatac accggttaat gctttgatta gcgtcgattt tcccgccccg
    19261 ttttcaccga gcagcgccat gatttcgcca cggcgcaggc tgaaatcaac gttgtctaac
    19321 gctttgacgc cggggaaaaa tttacttaat ccttcggtgc ggaggatttc ctggtgttgg
    19381 tcggtcgtca tggtttcccc cttagccacg ctctaaaagt ctgggaatag atcgtgcctg
    19441 atgttaagag ctgcgccgtt tgtccccctc accctaaccc tctccccgaa ggggcgaggg
    19501 gacagattgt gcacggtgtt aagtccggtg ttgcaccact gccggatgcg gcgtgaacgc
    19561 cttatccggc ctacacagag caccgaactc gtaggcatga taagacgcgg taagcgtcgc
    19621 atcaggcttc agcgcaccac cgccggatgc ggcgcgagcg ccttatccgg cctacgaatc
    19681 ggcatcaggc attgataccc tcaatacccc atatttttct tcttctctaa ctcttctttt
    19741 gcggtatcag gcagataaag ggtggatttg gtcagcgtta gcttttcagg catggtgccg
    19801 tcttttttgt atttctccag cgcgtcgaag gcgggacctg ccatattcgg cgtcagttca
    19861 acactggcgt tcgcttcgcc atcaatcatc gctttgtaga tatccggtac gccatcaatg
    19921 gaacccgtga ggatatcttt acccggcttc aggcccgctt ctttaattgc ctgaattgca
    19981 ccaatcacca tgtcatcgtt atgggcgtaa accatgcaga tgtttttgcc gttgttttcc
    20041 gctttgataa agctctccat gacttctttg cctttactgc gggtgaagtc acctgactgc
    20101 gagcggataa ttttgatatt tggcgcattc ttaatggctt cggcaaagcc tttcttacgg
    20161 tcaatggcga cgctggcccc aacggtgccc tgcagctcca ccacgttgca tggtttgcca
    20221 ttcacttctt ttaccagcca gtcaccaatc aacttgcctt cgaggatgtt gtcggcggtg
    20281 acagtggtca tatagagaga tttgtctttc acatcgatgg aacggtcaag caagaagacc
    20341 gggatttcgg catctttcgc ctcttttaat accggctccc aacccgtcgc taccactgga
    20401 gcgataaaga tcgcatccac cccttgtgca acgaaggaac gtaccgcttt aatctggttt
    20461 tcctgctttt gttgaccatc ggcaattttc aacgtaattc cgcgtttttc ggcctcactt
    20521 ttcgccacat tggtttctgc ggcacgccag ccggattccg atccgacctg cgaaaatcct
    20581 acggttaatg gagcggccaa cgccatagac gacatggctg ccgagactgc agagactaca
    20641 agtaagcgtt tccacatagg gttgtcctcg tcggggtaat tattattggt gaaaagatgt
    20701 tcgcgaaaaa actatagaca attcgttatg taacggattg cgttacatca cacttcaaaa
    20761 aagtaaataa aacgttaatc acaagtttgt aatcgctttc atctcactat gaaaaatgcg
    20821 gctacggtta tggattttcc tgctctgcat accgtcttaa aactggcgaa aaaggaaaat
    20881 gaagacgaaa acaagcgaag acattcggcg cgagttggct ataatactcg gcacttgttt
    20941 gccacatatt tttaaaggaa acagacatga gcttactcaa cgtccctgcg ggtaaagatc
    21001 tgccggaaga catctacgtg gttattgaga tcccggctaa cgcagatccg atcaaatacg
    21061 aaatcgacaa agagagcggc gcactgttcg ttgaccgctt catgtccacc gcgatgttct
    21121 atccgtgcaa ctacggttac atcaaccaca ccctgtctct ggacggtgac ccggttgacg
    21181 tactggtccc gactccgtac ccgctgcagc cgggttctgt gatccgttgc cgtccggttg
    21241 gcgttctgaa aatgaccgac gaagccggtg aagatgcgaa actgattgct gttccgcaca
    21301 ccaagctgag caaagaatac gatcacatta aagacgttaa cgatctgcca gagctgctga
    21361 aagcgcagat cgctcacttc ttcgagcact acaaagacct cgaaaaaggc aagtgggtga
    21421 aagttgaagg ttgggaaaac gcagaagccg ctaaagctga aatcgttgcc tccttcgagc
    21481 gcgcaaagaa taaataagtt cttctggcgc aataaccctg aacaccgggc ttcggttagt
    21541 aagggttttt ttatgcccgc gataaataaa cacaccttat tccaccaccg cctgcaagcg
    21601 taataacgcc tcttccacca cctcatccgc agccagacca atacgctttg ccagccgggc
    21661 gcgtagatcc atcatccgca cctgattcac cagcaccacg ccgtgcacat cgccttcttc
    21721 gcaatgtaaa ggaacgctaa atccggcata acgggcaaaa tttccgccct gcgtaatggg
    21781 ggccaccagc gtcattccca gttgattaaa ggcttgaacg gagagcacaa gcgcaggtcg
    21841 accagcacct tgctgttcat ggccgcttgc tggatcaaag ccaaccagca caatgtctcc
    21901 ccgttcaaat tcacttttct ttaccatatt tcgtcacccg caggggtgga tttaccccag
    21961 acatcctgct cgctaagttc cgcggcgttc atgtcacact gtgccagcag ttcatcaagc
    22021 gagtagcgcc tggagatggg tgtcagaatc agttggttgt tgctcacctg cgcttccacg
    22081 ctctgccccg gctgtaagtt aagttctttc attaagatat tgggaatgac catacctgca
    22141 ctgttccccc atctttttat ggtaatacgc atctgcacct ccttaagtta tacaaagtat
    22201 aactcacggt gctacaggaa acgttttacc cctgcacatt tgtgaacgcc agcagagttt
    22261 tttatgcgat tgcagatatg gaaagcggct cggagagaaa agtaaaagat ggaaaagtta
    22321 caaaaaaaaa tcgcgagata catcgcataa aacaacgcca cccgaaggtg gcgtgctttt
    22381 attattactt atccctgtct aaccagtcgc cgctttcaat tagctttaat ccatcgacgg
    22441 gtcgttgata aacgtacatc catgcactcc cgtacggcgt ctgaatcaac tggcgcgcgt
    22501 attcaccgcc cctggtgcgc aaggcatcaa gttcggccag cgtggcgttg tcaatacgat
    22561 aaacttcacc gtgtactgtt ccgttccccg gaactgcgcc tggatagtgg cccaggctat
    22621 acaactggta gttatcgata ctgaaatcgc ccagtaactg ggcattggtc atccagtgac
    22681 tgttgccttg tttgtggcgt aaactgccgt agacaaatat tcgcattgct aaaactcgaa
    22741 ctgatagagc aaatccagtg cctggtctac accagacacg gcttccagat atagcttagg
    22801 catcaggcga taacgtaacg tgagtgttgc tatagagtca aatataccca cgccgtattt
    22861 cacttgcaga cctggcaata catagccgct gaccactacc tgggaggagt cgcctactcc
    22921 ctgggtgtcg agcgctaaat tgcttacgcc aaacgtctcg ccgattttac ccacaatctg
    22981 gccactttgc gcaaccccca ggccaatcag cattgaggtc atcgccgcac tgtcgctctg
    23041 atcgctctcc agcccttgtc cacgtagcaa ataagacaat gcagcttgtt gcgacatagc
    23101 cgggtcagag aagatctccg ctttcggttc gtccgccaga ccagtgacgc gaactccggc
    23161 gattacgtcg tcttctgtag catccgggtt acgaatagct tcaatattaa gatacggttg
    23221 atctggcgga ccagagaaca gtagctcacc cttacgcaca atcagatcct gaccataggc
    23281 atggaagcgc ccttcaggga tgttgatctg cccgttcagg cccagccctt gtttgtcctg
    23341 aacgacgtta agatcgcccg tcagccgcgc tttcaggcca aaggcgtcaa tgcgcacatt
    23401 gttgccaacg tggacaatca ggttactgtt aatcggaatc gacgccgttt tcggctcttc
    23461 cggttgcagg ttatcgttaa gcatcaccac atcgctggag acgcctactg cgctttccgg
    23521 cagatcgtgc accacgatgc gcgcccacgg gacatccacg cgaccatcga gggtaaacag
    23581 gtttggtgta gcctcgaata caacatctgg cgatacatcc attcgtacca tcggcggcac
    23641 ggtgatccgc actttactgc ctttcgccgt tactcgtgcc cgccagtttt caatttggct
    23701 ccagtcggca tcaccgttca ggtagatttc accctgctgg gtccgtactg taccggcaag
    23761 cgtcgagcgc ataccgttaa agttgaccgc aagctggctc ggctgcatat caaacggcat
    23821 aaagttgccg tcgatatcca cacccgtaac ctgaagctga ccaaacaact gcgggctttg
    23881 cacatcacca cccagacgca agttggcact caccatcccc gctgcttttt ccccacgggt
    23941 aaagatgggg tttatcatcg caaggttgaa gttacggata ttgacgttgc caccaagatt
    24001 acggcggcct tgcggatcgg tcacctgcac ctgtccatca aactggccgt tattggtcag
    24061 gcggatggtc cagcccaatt cggcacggtt gttacgcaat tccgccgtca gattcagtgt
    24121 ctgaaacgcc accggcagcg ccgcatcgtt gacggtttgc gttacctgca cgttacgccc
    24181 cgaaagggtg atactgccct gcggcagccc ctctttcgtg gtgtcccagg caacatccgc
    24241 tttacccgtg aagataccgc tggcctgagt ggtttctggc ataaacggtt tcagcatggc
    24301 gaggtcgaag cggttgagat tcaccaccgc acgcccttcg gcccccgcat cgatagtttg
    24361 cggcacgcac agttccgcat tcgggttaag ccagcagtgt ggcccgatgc tgattttttg
    24421 ctccttattg cggtaatcca gcgcaatatc gcgggtcagc gaccacgggc cgaccggcgt
    24481 ctggaagcgg gtattgctaa gagttccctt ccagcgttct tctttgcgat caaaacttcc
    24541 tgccagatta agctgcccgg agacaggctc gccctgaatc cgcaactgta gctcgtgctg
    24601 cttttcgctg cctttggcat tcagggtgac gaggttgata tttacatccg gctgcgaaat
    24661 ttgctcaacg cgtacgtcga gtttcccggc gatctgatcg gtggatttaa tgtcgccttc
    24721 cacgcgaacc tgcgccacgg aaagttcctg ccagcgcagg ccgcgcgcgg tgatatctgc
    24781 cagtagttgt ggcgcttcca ccgtgccgcg tactttcacc agccctttcg ctgtaccgcc
    24841 aagccccggc agcgcgttat ccagccccgg cgcgttgatg gtggcatcaa gattgagatc
    24901 ttttaccccc agctcgcctt tcacttcggc actgtttggc ccgagttcca gatgaagccc
    24961 agggatcatc cactgcatat aactgttgcc tttcagcgtg ccgtcaacgt tcactttgtt
    25021 ctgtttgacg ttaccggtca gcttcagttc tggcacctcc atctgccagg tgccgccgta
    25081 caggctaccg cgggttttaa tcaagccatt gagtttcgac ggccactccg ggaactcttt
    25141 ggcggtgtta atgccattaa gcgttagctc accgcgccaa ctaatggcct gctgccagtc
    25201 gagcaacgcc ttgagttcag ttttcccttc cagcgccgcg acggtgagtt tgtcgagatt
    25261 gacctgctgt tcattacctt tggcatcaag ggtaatggtg gctggcggga tctcctgtcc
    25321 cttcactgcc gtacgcatag agagcgtgta atcggtcatt ttgccggtaa gtttcagttt
    25381 cagatcatcc gcctgatact gcttctcacc agtgaacggc cagtaaagct gtttgctgtt
    25441 cacttccacg ttgagcggca atccggcttc cgccagtcgc gtctgggcgc gtaaatccat
    25501 atccaccgga ccggaaagat taacgccaat ctccagctgt tcgcgcagcg cgccgcccac
    25561 ttttagcttc actttttcac ctttcaacgg ctccacgttc agtgtgctgt tgagggtgat
    25621 atccaccggc cagttgtctg acagctgcgc cgtgccgctg gcgttgacga tcccttgact
    25681 ggaatcgata tccagggcgt ccagtttagt attgccgtca atgctgctca ctttcagcag
    25741 catggtgcgc acggtgatgt ccgtgtcgcc cgtcacgcgt aactgctcgc ctttaaactc
    25801 ttcaatgttc aggttaagcg gcaaatgcaa gtcggtcatt tccggcaata ccgggcgaga
    25861 aaagagatct ttcagcgttt cgccgagcgg cttttcctcc ggctgcggat tttcaatttt
    25921 cggttcgacc acttcttcct gcgccacttc cgccactttc ggcagagcaa tcagcaggcc
    25981 tttcagcgac gtcggtttca gggtcagggt tttttcctgc cagttcaggc cggaggtgaa
    26041 gtccatcacc gacaccgtgg tgtcatcaat cttgatgttg acgttatcca gcgccacccg
    26101 tgtcagggtg atgggatacg gcgtggagag atccagcgga ccgctatctt cctcttcttc
    26161 aacctgttca gaaggaggca tttttttact gtcgatgttg acctgaatgt ctttcagcgc
    26221 caggtcatta atacaaacgc tactgttcca caggcactca agaccgaccg ccagatgcag
    26281 attacccgct tttaccgcca cgcctggctg ctcataacga acgtcagaca aggtgagatc
    26341 gcgccagccg ccggtgacct tgccaatatc cagtcctggc acccagcgat ccgccgcttt
    26401 aaatacaaga tgcaggccgc tggtggtgcc caccagaaac gccaccgatc ccagcaacag
    26461 taagataacg ataaccacgc cgaggctgat ttttttccat aaactcataa ttctggcccc
    26521 agaccgatgt aaaactgtaa cccgtgctcg tctttatccg cgaccggtac ggcaaaatcg
    26581 agtttgattg gcccgaccgg cgattcccag cgtacgccga ccccggtacc ggttttaaag
    26641 tcgctgcggc gaatatcgct taccgcttcg ccactatcga caaacaccgc gccccaccat
    26701 tttccggtca cgttgtactg gtattccagc gatccggtta tcagcttcga ggcccctttc
    26761 aggtcaccgt tggagtattt cggggcgata gatttgtatt tgtagccgcg aatactgcga
    26821 tcgcccccgg cgaagaaacg cagatccggc ggtactttgt cgaaatcacc ggtttcaatc
    26881 cagcccagcg tgccgcgtgt cacaaaacga tggcgatcat acagtgtgcg gatccagacg
    26941 ttttgtgcct ggaaaacgga gaaatcgaca tctgagcccc aggccgtgtt ggagtagtcg
    27001 atagagtagc gttgcgagtc gccccaggtt ggcatcaggc caccacgaga acgcgtgcgg
    27061 ctaatcatca ccccaggata aaacagcatc gtggtgttgg taatttcacc ctgagtaaag
    27121 tggtcgagac tccagcgcag gttaatggca cgctgccagc cgctggagag atcccagtag
    27181 cgagaagcca ccagcgtagt ggagtcagat tcggtatcgt tcaggtcagt gcgcttaaaa
    27241 ccgccctgca ccaaataata ttgttccagt ggattcttca gcagtggcat tttatagctg
    27301 aagtcgaggg tctgttccgg cgcggaaata ctggtactgg tggtcaaact gtgaccgtat
    27361 gagttcatcc acggcttttt ccacgtcgct ttcacgcgcg gtcccacgtc cgtagagtaa
    27421 ccgaccccgg tttcgatggt gttttctgtt cgcggcgaaa ccacgcccgt caatggtaat
    27481 actttcgttt cgcgcgcttt atcaaattgt ggagccacca ccaccgagtt aaaccagccg
    27541 gtagcagaaa gtcggcggtt cagttccgcc agatctttcg attcatactc atcgccctct
    27601 ttaaacggca ccagattttg caggtattca tcgcggattt gtgatccttc aaaggtcaca
    27661 tgcccaaagc ggtaacgttc gccactgtta taatcaatat cccagaaggc tttatgcagg
    27721 ccgagcgcaa tgcccagctg cgctttggta aattcgctat cgaaataacc tttacgcaac
    27781 gcaatactgg ttaaggactt tttgaaattt tcataatcgc cctggttcag taccgtgcca
    27841 atagccgggc gagtatcgag caatttcaaa tagtctttat cggtccgcgc gccaccgcgc
    27901 aataccacat cagtgccgcc aattaacacc ggcacgcctg gcgtgacttt ggcgatcaat
    27961 acctgccgcc ctttctttgg cggtggacgg agatcaaatt caatggtcgg ctggtaataa
    28021 cccagcgctt tcagaccttc gcggatggca tcatcgacgc gtgcgcgaaa gcgacggtct
    28081 ggcgtcactt catcactttc aatcgtagaa agctgcgcac gaacgttctt ttccagctgt
    28141 cccgataacc cctcgacctg tagacggacg ttcgcggcga cggcagatcc gcttaagcag
    28201 agtaagctta cacagcataa ctgtcggata tagcgcacat tttctcctga atatcctttt
    28261 ttcctgcccc tggaacgccg ttaaacggct taacaaaaat ccagtaatat ggattaaaaa
    28321 gcagactaaa ccccaaatat ttcttatgtt ttactttaga cctattcacg gtggttattg
    28381 tgtgcaaata cgcctcttgt tacaacctta accccaatga ccgattttcg ggagagcgac
    28441 accatgagtt tatttgataa aaagcatctg gtttcccccg ccgatgccct gcctggacgt
    28501 aacaccccga tgcccgtagc cacgctgcat gcggtcaacg gtcactcaat gaccaatgta
    28561 cctgacggaa tggagattgc catttttgcg atgggttgtt tctggggtgt ggagcgtctg
    28621 ttctggcagt tacccggcgt ttacagcacc gccgcaggct ataccggcgg ctatacgcca
    28681 aatccgactt atcgggaagt gtgctccggt gatacgggtc atgccgaagc ggtacgcatt
    28741 gtttacgatc cttctgtcat cagctatgag cagttgctac aggtattttg ggagaatcac
    28801 gatcccgccc agggaatgcg tcagggcaat gaccacggca cgcagtatcg ttcagcgatt
    28861 tatccgctga ccccagaaca ggatgccgca gctcgcgcca gtctggaacg ttttcaggcg
    28921 gcgatgcttg ccgccgatga cgatcgtcac atcaccacgg aaatcgctaa cgccacaccg
    28981 ttttattatg ccgaagatga ccaccagcaa tatctgcata aaaacccgta tggttactgt
    29041 ggaattggcg gaattggcgt ctgtctgcca ccggaagcat agcgttacgg gtacaaatgt
    29101 agattgttga taaagtgcgt tttgtttatg ccgaatgcgg cgtgaatgcc ttaccaggcc
    29161 tacaaaatcg tccaaattca atatattgca gggactgcgt aggcctgatc ggcatagcgc
    29221 atcaggcagt attgcattta tcagcagtct gaattttaac cctctggcga ctttacagta
    29281 ccttacgcta tactagccac tgaaaatgcc ggttcacttt cttcgaatcg gctttcaatg
    29341 tgtatttcac acaaattaat caacttcccc ttccgaggat ctggcctgaa aggtcggata
    29401 agatatgtta aacagtattt tagtcatact ctgcttgatc gctgtaagtg cgttcttctc
    29461 gatgtctgag atctcacttg ccgcctcacg caaaatcaaa cttaaactgc tggctgatga
    29521 aggcaatata aatgcccaac gcgttctgaa tatgcaggaa aatcccggca tgttctttac
    29581 ggtggtccaa atcggtctga acgcagttgc gattctcggc ggtatcgtcg gtgatgcggc
    29641 attttctcca gcttttcaca gcctgttctc ccgctatatg tcggcagaac tctctgagca
    29701 actgagcttt attctctctt tctcgttagt gactggcatg tttatcctgt ttgcggattt
    29761 aaccccgaaa cgcatcggta tgattgcgcc agaagcggtg gctttgcgta tcatcaaccc
    29821 gatgcgcttc tgcctgtacg tttgcacccc gctggtgtgg ttcttcaacg gcctggcgaa
    29881 catgatcttc cgtattttca aactgccaat ggtacgtaaa gatgacatca cttctgatga
    29941 catctacgcg gtagtggaag ccggtgcgct ggcgggcgtg ttacgtaaac aggaacacga
    30001 gctgattgaa aacgtctttg agctggaatc ccgtaccgtt ccgtcttcaa tgacaccgcg
    30061 tgaaaacgtg atttggtttg atctccacga agatgagcaa agcctgaaga ataaggtggc
    30121 ggaacatccg cactctaagt ttctcgtctg taatgaagat attgaccaca tcatcggata
    30181 tgtcgattct aaagacctgc tgaaccgcgt gctggctaac caaagcctgg cactgaacag
    30241 cggagtacaa attcgcaaca cgctgattgt gccggatacg ttaacccttt cagaggcgtt
    30301 ggaaagtttt aaaaccgcag gtgaagactt cgcggtgatc atgaacgagt acgcgctggt
    30361 ggtggggatc atcaccctca acgacgtgat gaccacgctg atgggcgatc tggtcggtca
    30421 ggggctggaa gagcagattg tcgcccgtga tgagaactca tggctgattg acggcggcac
    30481 cccaattgac gacgtcatgc gcgtgctgga tattgacgag ttcccgcagt cgggcaacta
    30541 cgaaaccatc ggcggcttta tgatgtttat gctgcgtaag atcccgaaac gcaccgattc
    30601 ggtgaaattc gccggctaca aatttgaagt ggtggatatc gataactacc gcatcgacca
    30661 gctgctggtg acccggatcg acagcaaggc caccgccctt tcgccaaaac tgcctgacgc
    30721 taaagataaa gaagaaagcg tcgcgtaacc cccagaaaca tcaacggctc ctgaatcagg
    30781 agccgtctta ttactgcata gcactttggt taagccatct ctgtttgcag acgcataacc
    30841 tgacggttaa cttcggacat cactgacaaa tgcagcttat ccttcacttt tgggataaga
    30901 atcttaccct tatcaaattc aaaagcgcca acgtccttga tgtataaccg tccacggaac
    30961 aggatcttta cgtacttcgc cacctgaagt gggttgtacc gttggaaaat tttcattgtt
    31021 atctcctgct gagtattacg cctgtgcggt gccacaatcg gcccaactat tatgaggcgc
    31081 aaattttaat gcctagtgac tatagactat ccgggcaatg tttccaccgc gtataacttt
    31141 ttttacctaa aggttacaat tattcagaat tatcttttta ccgaagcgcg gtcttcagta
    31201 taagcattca tttttcatat gatttgtgcg cttgaccgca aactggcatc acacttgcgg
    31261 gaaattcgat aaatagcaca tatgattaaa actcagaccc aagtggtcgg atcacctgca
    31321 tatcataaga aggaaacacc atgaccctac gcaagattct ggcactcacc tgcctgctgt
    31381 tgccgatgat ggcttccgca catcagttcg aaaccggtca gcgagtgccg ccgattggca
    31441 tcaccgatcg tggcgagttg gtgcttgata aagatcagtt tagctacaaa acctggaaca
    31501 gcgcgcagtt agtgggaaaa gtgcgagtac tgcaacatat tgctggtcgc acctctgcaa
    31561 aagagaaaaa cgcgacgctg attgaagcga ttaaatcagc gaagttaccg cacgatcgtt
    31621 accagaccac caccattgtt aacaccgacg acgcaattcc gggttccggc atgtttgtgc
    31681 gcagcagtct ggagagtaat aaaaagcttt atccctggtc gcagtttatt gttgatagca
    31741 atggcgtcgc acgcggtgcc tggcagctgg atgaaaaaag ttccgctgta gtggtgctgg
    31801 ataaagacgg tcgcgtgcaa tgggccaaag acggggcgct tactcaggaa gaggtgcagc
    31861 aagtgatgga cctgctgcat aaattaatta ataaatagac actctgaacc caggattcag
    31921 gaacgactcg cgcggagtgt aatccagcgg tttaccctgc cagtcgtgaa cgtgcgctcc
    31981 ggcagctgcg gccacagcat gtccagcggc ggtgtcccaa atattcgttg gtccgaagcg
    32041 cgggtacagc tgcgcctgtc cttccgccac caggcagaat ttcagcgaag agccgatgga
    32101 cgtggtctga tgttcgccaa gctgttgcag atactctttc agctccgcat ctgcatggga
    32161 acggctgata accaccagcg gcgggcgcgc atcgcggacc tgaatctgct tgcgcacacc
    32221 gcactcttct ttccaggcct tgccttctgc cgcgctgtac attacgttca ttaccggcgc
    32281 atacaccaca cctaaaatcg gtttgccatg gtcaatgagc gcaatgttaa cggtgaattc
    32341 gccattgcgt ttaataaact ctttagtacc atccagcggg tctaccagcc agtaacgctg
    32401 ccagtgctga cggacttccc aaccgggagg atcttcttca gaaaggaccg gaatatccgg
    32461 tgtcagcgta cgtaaaccgt ccatgataac ggtgtgtgcg gcaatatccg ctgccgttac
    32521 cggagaattg tccgctttgc tgacgacgtc catcggtttc gtcccgtcgt agacctgcat
    32581 aatggcatcg cctgcattcc gtgcaagctg gcatacttga tctaacattt ctccacctcg
    32641 tctctgtgag cggtgttaac ttattgtttt acttataccc tatcgttaat gaatgcgcca
    32701 actgtgatag tgtcatcatt ttcaaagcgt aaaattgtgg cattcttcac tgttctataa
    32761 gtaagacgtt tattctccct tttctttcgt attcccgatg ataaaaggat gtccctgatg
    32821 attaagttta gcgcaacgct cctggccacg ctgattgccg ccagtgtgaa tgcagcgacg
    32881 gtcgatctgc gtatcatgga aaccactgat ctgcatagca acatgatgga tttcgattat
    32941 tacaaagaca ccgccacgga aaaattcgga ctggtacgta cggcaagcct gattaacgat
    33001 gcccgcaatg aagtgaaaaa cagcgtactg gtcgataacg gcgatttgat tcaggggagt
    33061 ccgctggccg attacatgtc ggcgaaagga ttaaaagcag gtgatgttca tccggtttat
    33121 aaggcgctga atacgctgga ttatacggtc ggtacactcg gcaatcatga atttaactac
    33181 ggtctggatt acctgaaaaa tgcgctggcg ggagcgaaat tcccttatgt aaatgccaac
    33241 gtcattgacg ccagaaccaa acagccaatg tttacaccgt atttaattaa agacaccgaa
    33301 gtggtcgata aagacggaaa aaaacagacg ctgaagattg gctatattgg cgtcgtaccg
    33361 ccgcaaatca tgggctggga taaagctaat ttatccggga aagtgacggt gaatgatatt
    33421 accgaaaccg tgcgcaaata cgtgcctgaa atgcgcgaga aaggtgccga tctcgttgtc
    33481 gttctggcgc attccgggct gtctgccgat ccgtataaag tgatggcgga aaactcagtt
    33541 tattatctca gtgaaattcc gggtgttgac gccattatgt ttggccatgc tcacgccgtt
    33601 ttcccaagta aagattttgc tgatatcgaa ggagctgata tcgcgaaagg cacgctgaat
    33661 ggtgttccgg cggtaatgcc aggcatgtgg ggcgatcatc ttggtgtggt cgacttacaa
    33721 ctcagtaatg acagcggtaa atggcaggtg acgcaggcga aagcggaagc tcggccgatt
    33781 tacgacatcg ccaataaaaa atccctcgcg gcggaagaca gcaagctggt agaaacactc
    33841 aaagccgatc acgatgccac acgccagttc gtcagcaagc caatcggtaa atctgccgac
    33901 aatatgtata gctatctggc gctggtgcag gacgatccga ccgtgcaagt agtgaacaac
    33961 gcgcaaaaag cgtatgtcga acattacatt cagggcgatc cggatctggc aaaactgccg
    34021 gtgctttcag ctgccgcacc gtttaaagtt ggtggtcgca aaaatgaccc ggcaagctat
    34081 gtggaggtgg aaaaaggcca gttgaccttc cgtaatgccg ccgatcttta tctctacccc
    34141 aatacgctga ttgtagtgaa agccagcggt aaagaggtga aagagtggct ggagtgctcc
    34201 gccggacagt ttaaccagat tgatcctaac agcacgaaac cgcaatcact catcaactgg
    34261 gatggtttcc gcacctataa ctttgatgtg attgatggtg tgaattatca gattgatgtt
    34321 acccagcctg cccgttatga cggcgagtgc cagatgatta atgccaatgc ggaaaggatt
    34381 aagaacctga cctttaatgg caagccgatt gatccgaacg ccatgttcct cgttgccacc
    34441 aataactatc gcgcttacgg cggcaaattt gccggtacgg gcgacagcca tatcgctttt
    34501 gcttcaccgg atgagaaccg ctcggtgctg gcagcgtgga ttgctgatga gtcgaaacgt
    34561 gcgggggaaa ttcacccggc ggcagataac aactggcgtt tagcaccgat tgctggcgat
    34621 aagaaactgg atatccgttt cgaaacttcc ccgtcagata aagccgcagc gtttattaaa
    34681 gagaaagggc aatatccgat gaataaagtc gcgaccgatg atatcgggtt tgcgatttat
    34741 caggtggatt tgagtaagta aaacacttct ttttcggcct ataaatcatc aaccgcatcc
    34801 ggcatttatt ggcggatgcg atgctggcgc atcttatccg ccctacaagc catgcaccgt
    34861 agaccagata agctcagcgc atccggcagt tatgccgcac gttcatcccg caccgccaac
    34921 acctcgggca aattcaactc aatccagtcc gccagtgcag caaccttttc gctcacctgc
    34981 tcgcccagcg gcgtgaggct gtattccaca tgcggcggca ccaccggata cgcgatacgg
    35041 ttaagaaaac catcctgttc taacgcctgt aacgactgcg caagcatctt ttcactcacc
    35101 ccaccgattt tgcgccgcag gtcgctaaag cgatgagtac cttcgcgtag cgccaccaga
    35161 atcaataccc cccaacggct ggtgacgtgt ttcaacacct cgcgcgacgg gcactgttcc
    35221 gcaaagagat taccctcttt cagttgttgc gacaggctaa cctgactcat ttcatactta
    35281 cctttttgta cgtacttact aaaagtaagt ttaggtgtta gcgtatttaa acacaagaca
    35341 aaacgatgga gacttcccat gatcgctatt actggtgcca ctggccaact tggtcactat
    35401 gttattgaat ccttgatgaa aacggttcct gccagccaaa tagtggctat cgttcgtaat
    35461 ccggcaaaag cccaggccct ggcagcacaa ggcattaccg tgcgtcaggc tgactacggc
    35521 gatgaagccg cactgacatc tgcacttcag ggagtggaaa aactactgct gatctcttcc
    35581 agcgaagtgg gtcaacgtgc cccgcagcat cgtaatgtta ttaatgccgc aaaggcggct
    35641 ggcgtgaaat ttatcgctta taccagcctg ctacatgcat atacctcccc gctcggcctc
    35701 gccgatgagc acatcgagac ggagaaaatg ctggctgatt ctggcatcgt ttacaccctg
    35761 ctgcgcaacg gctggtacac cgaaaactac ctcgccagcg ccccggcagc actggaacac
    35821 ggcgtattta tcggtgcggc gggcgatggc aaaatcgcct cagcaacgcg ggcagattat
    35881 gcggcagctg cggcacgcgt gattagcgaa gccggtcacg aaggcaaggt ttacgaactg
    35941 gcgggcgata gtgcctggac gttgacacag ttagcggcag agctgaccaa acagagcgga
    36001 aaatccgtta cctatcaaaa tctgagcgaa gccgatttcg ccgcggcact gaaaagcgtc
    36061 ggactgcccg acggactggc ggatatgctg gcggattctg acgttggcgc atcgaaaggt
    36121 ggtctgtttg ataacagcaa aacgcttagc aaattgattg gccgcccaac gacaacgtta
    36181 gccgaaagcg taagccatct ttttaatgtt aataactagt taattaaagt ggcatcctcc
    36241 cgcatcctct ctaataatga cgggatgccg ggagcaatca tgtctgcttc ctgaactttc
    36301 ttctgacaga ccaatggatg ccagtaatga ttagcggcgt gctgtacgcc ctgttagcag
    36361 ggttgatgtg ggggcttatt tttgtcgggc cgttgatcgt accggaatac ccggcgatgt
    36421 tgcagtcgat ggggcgttat ctggcgttag ggttaattgc gctgcccatt gcctggctgg
    36481 gacgcgtgcg tctgcgtcag ttggcgcgtc gggactggct taccgccttg atgctcacta
    36541 tgatgggcaa cctcatttat tacttctgcc ttgccagtgc cattcaacgt actggcgcgc
    36601 ctgtttccac gatgattatc ggcaccctgc cggtggtcat tcctgtcttt gccaatctgc
    36661 tttatagcca gcgcgacggc aaactcgcgt ggggaaaact cgccccggca ctgatttgta
    36721 ttggcatcgg cctggcgagt gtgaatattg ctgagttaaa ccacggactc cccgattttg
    36781 actgggcacg ttatacctct ggcatcgtgc tagcgttagt ttccgtggtc tgctgggcat
    36841 ggtatgccct gcgcaacgcc cgctggctgc gggaaaatcc cgacaaacat ccgatgatgt
    36901 gggcgacggc gcaggcgctg gtcacgctgc cggtttctct catcggctat ctcgtcgcct
    36961 gttactggct gaatatacaa acgccggact tctccttacc ttttggcccc cgtccgctgg
    37021 tgtttattag tctgatggtt gcgatagccg tgctttgctc atgggttggc gcactctgct
    37081 ggaacgtcgc cagccagcga ttaccgacag tgattctcgg gccgctgatt gttttcgaaa
    37141 cgctggcagg tttgctgtac acctttttac tccgccagca aatgccgccg ctaatgacgc
    37201 tgagcggtat cgcgctgtta gtgattggcg tggtcattgc ggtcagagca aaaccagaaa
    37261 aacctttaac tgaatctgtc tcataaagtt gacacgctgg cagtgagtta aataagcctc
    37321 tgctacgtaa gggttatagc ttttgcctta aagatgcatt taaaatacat cttatattat
    37381 taagaatgag gtatcagcta tggcttatcg cgaccaacct ttaggtgaac tggcgctctc
    37441 tatccctcgc gcttcggctc tgtttcgtaa atatgatatg gattactgct gtggcggtaa
    37501 gcagacgctg gcgcgcgcgg cggcacgtaa agaactggat gttgaggtca ttgaagctga
    37561 actggcaaag cttgctgaac aaccgattga gaaagactgg cgtagcgccc cgctggcaga
    37621 aatcattgac catatcatcg tgcgctacca cgatcgtcac cgcgagcagc tgccggagct
    37681 gatcctgcaa gcgactaaag tcgagcgcgt tcacgccgac aaaccgagcg tgccaaaagg
    37741 gctgacaaaa tacctgacta tgctgcatga agagctttcc agccacatga tgaaagaaga
    37801 gcagatcctc ttcccgatga tcaaacaagg catgggcagc caggcaatgg gaccaatcag
    37861 cgtgatggaa agcgagcacg atgaagcggg cgaactgctg gaagtgatta aacacaccac
    37921 caataacgtc acaccgccgc cggaagcctg caccacctgg aaagcgatgt ataacggtat
    37981 taatgaactg attgatgacc tgatggatca catcagcctg gaaaacaatg tactgttccc
    38041 acgcgcgctg gcgggtgagt aatctaaaag ctggatggca ttgcgccatc cagcatgata
    38101 atgcggttat ttccgcagtt cagcagcccg cttcttacca ataaacaacc agcccagccc
    38161 cagtgcgata aaccacagcg gggtgaccaa cagcgcctgg cgagtgtcat cttccagtgt
    38221 cagcaacacg accacgaaca caaagaacgc catacatacc cagcacatca gcttgccgag
    38281 cggcatcttg tagatcgact tctcatgcag atgaggacgc tgtttgcggt aaaccaggta
    38341 cgagcaaagg ataattgtcc agacgaacat aaacagaatc gcggaaacgg ttgtaatcat
    38401 cgtgaacgcg ccaatcacgc taggattcac atacaacatc accacgccgc cgagcagaca
    38461 gatacacgag aaggtcaacc ctttcgcggg tactgcgcgc ttagaaagtt tagcgaacgc
    38521 tttcggtgct acaccttcct gcgccagacc aaacagcata cggctggtag agaagacgcc
    38581 gctgttagcg gaagacgccg cagaggtcag caccacaaag ttgatcacgc ttgcggcagc
    38641 aggcagccct accaacacga acagttcaac aaacgggctt ttctccggga ctaccgaact
    38701 ccacggcgtc acggacataa ttacaatcag cgcgaagacg tagaacataa tgatacggat
    38761 cggaatagag ttaattgcac gcggcagtga tttctccgga tctttggttt ccgcagcggt
    38821 tgtacctacc agctcaatcc ctacgaaagc gaaaaccgct atctggaatc cggcaaagaa
    38881 gccacttaaa cctttcggga accagccgcc atcattccac aaatgcgcga atgacgcttc
    38941 cacaccagtc ggtgactgaa agtgcatcgc caccataacc aggccgacga caatcagcga
    39001 cacaatggcg acgattttga tcatcgcaaa ccagaactcc atctcaccga acattttcac
    39061 ggtggcgaga ttgagcgtca gcagcagcac tatcaccgcc agcgaggcga cccagtcgga
    39121 gagatcgggg aaccagaact gagcataagc agtgatcgcc accacgtctg ccataccggt
    39181 tacaacccag cagaaccagt aagtccagcc ggtgaaatat cctgcccacg gcccgagtaa
    39241 atcggaagcg aagtcactaa aagatttgta ttccagattc gaaagcagca attcccccat
    39301 tgcccgcatc acgaaaaaga gcataaaacc gatgatcata taaacgaaaa tgatcgacgg
    39361 cccggcaagg ctaatcgttt tgccagaccc cataaacaac cccgtaccaa tggcaccgcc
    39421 aatggcaata agctgaatat gtcggtttgt gagattgcgc cgtagcgact gttcagccgg
    39481 agcctgatca tcggcaacga cttttacctg atctaccatg tttttttctt cctgtacctg
    39541 tctgtgttgt tcaggctcta cggcctttag tcagtctatg atacgacgaa tctgtatcgg
    39601 gactcatcga tattaggtaa caatacgcgg gatgaatact aagatttaga tctaatgtta
    39661 attttatgtt taaagtgagt gtcatatcac ggtgataacg cgaaacagct cacaaaaata
    39721 cacgcttacg gggtctttgc aacacaaaat agcgccgttt ggcaaactga agggtttatt
    39781 gctgaatgcc tgctcccctc tggttcgagg ggaacagaat gcgctgctta gagaatttcc
    39841 agcagttcga cttcaaacac cagggtactg aacggaggga tggatgcgcc tgcgccgcgc
    39901 tcgccatatg ccagttcctg cgggatagtc agttcccatt tagaacctac cggcatcaga
    39961 gtcagtgctt caatccagcc agggatcacg ccattaaccg gaaattcagc gggttcacca
    40021 cgagcaacgg agctgtcaaa cacggtgccg tcgatcagtt taccggtgta atgaacacga
    40081 acgcggtcgg tacgtgccgg aattgcgcct tcaccctggt tgatcacgcg gaattgcagg
    40141 ccagattcgg tgctattcac accttctttt ttggcgtttt cttccaggta tttcacacct
    40201 tcagcagcca tcgcctggaa acgctgacga cgaacggcat cggcgcgctc gtggatttca
    40261 cgcagcgcgc gatgcaccac atcaaccgga acagccggat gtttgccttc cagcgcatcg
    40321 gcaatacctg caaccagtgc ttctggcagc agcccttcca ggccagattc actcagttgt
    40381 tgccctacct gcaaaccaat gccgtagctt gcttgcgctt cgatggtgtc aaaagttggg
    40441 gtggtcatcg tatttccttt cttagggtat aaaagtagcg ggcagcatat cagccacact
    40501 tctttgggta aaactttgtc gcaggaatga tgacaaatcc cggggaaaaa gaaacaatag
    40561 caatatcccg tatgaatata ataaaggcgg gtttaccacg gacatcatag cgttagctta
    40621 ttcataggct atgattgagg aacaagacgc ggagcaggag gaaaccatgc ccgggcgctt
    40681 tgaactaaaa ccaaccctgg agaaagtctg gcacgcgccg gacaattttc gcttcatgga
    40741 cccgctgccg ccgatgcatc gtcgggggat cattattgcc gccattgtat tggtggtcgg
    40801 atttctgctt ccatctgatg atacgcccaa cgcgccggtg gtgacgcgtg aagcgcagtt
    40861 agatattcag tcgcaatcac aaccgccgac agaagaacag ctgcgggcgc aattagtcac
    40921 cccacaaaat gatcctgatc aggtggctcc ggtcgctcca gaacctatac aggaaggcca
    40981 gccagaagag cagccgcaaa ctacccaaac gcaaccattc cagccagata gcggaattga
    41041 taatcaatgg cgctcttacc gtgtcgaacc cggtaaaacg atggcgcagc tgttccgcga
    41101 ccacggactg cccgctaccg atgtctatgc aatggcgcag gtagaaggcg cgggtaagcc
    41161 gctgagtaat ttgcaaaacg ggcaaatggt gaaaatccgc cagaacgcca gcggcgtggt
    41221 gacgggctta accattgata cggggaataa tcaacaggtc ctgtttaccc gccagccgga
    41281 tggcagtttt attcgtgcgc ggtagatgaa gggtcaacca aaagccagct aaggattgtc
    41341 tctttgatga ccttacgtct ggcttcctgt gcctgggggg aaaccatact gatatgttga
    41401 catcctccac gccctgaagg acgtggatcc ctgcttcgtt caggctgtcg cctgaatcat
    41461 ttcggtgggt tcctgcttca acgagcggcc tgactgcacc atctctccac aggcaagaac
    41521 ggcgtgcccc gccgctaaaa tgttacgagc gccgtttaca tcggcgttcg ctgtatatcc
    41581 acatacctgg catctgaatt tactttgtga caggcgattt tctttcgctg tatgaccaca
    41641 gcacgcgcaa cgctggcttg tgtacgctgg cggaacagca agcacctgac cgccacgcca
    41701 gagctgcttg tactcaagct ggcggcgcat ttcataccag ccctgatcca gtatcgaacg
    41761 gtttaaacct gattttgccc ggacattgcg ccccggctgg ctgaccgtac ccgctgctga
    41821 ctttgacatg ttgctgacct tcaaatcctc aatgactatc attgcgtggt ttttgctgac
    41881 ggtcgttgtg actttatgaa ggtagtccct gcggatattt gcgatacggg aatgcagtcg
    41941 ctgtattttg cgtttctgct tctgccagtt gttgctgaat ttgaccctgc ggcttaactg
    42001 tcgctgaagt ctcgccagcg tcttctggtt tttctgaaaa ctgtttacag gctcaaagac
    42061 tgtgccatct gacagcgtgg cgagtttagc cacgccagca tccagcccga ccattgatgc
    42121 tgaagggtga accggagtgg atacttcact ttctgtctga atactgatgt accacttacc
    42181 gcaggactgg ctgacagtga catttttcac aactcccgtg acctgacggc tattccggta
    42241 gcgcatccag ccaagtttcg gcagaaaaat acggctgttt tcctgatcga gcttaacgcc
    42301 ctgcgggtag cggaatgcat cattctgtcc ccgctttttg aatcggggaa aagcagcccg
    42361 cttccggaag aagtttttgt aagcccgctc aaggcctttc agtgactgtt gcaatggctg
    42421 tgagggcgaa tctttaagcc attgcgtttc agtggcgttt ttccactcaa ccagccagga
    42481 agccattttc ccgtaaggga tgtatttatt accggcctca tgattctcat tctgaagcgc
    42541 cagagcacga ttgaaaacga aacgacatgc gcctgcgaag cgcctcattt cacgctcctg
    42601 ttgaccaccg ggtcttaact ggaatttaaa tgcctgtaat cgtttcacag gccaaatgat
    42661 actttggtct atgaataaag aaaccgatat ccgacgggga agcattgtgt tttcctgatg
    42721 catgttcacc tggtctttgt caccagatac cgacgtcaga tttttgacta tgacgcgaca
    42781 gaaaaactac gcacttactt ttcaaatgta tgtgctgatt ttgaagctga actggttgaa
    42841 atggatggcg aaccagatca cgtccatttg ttaattaact atcctcccaa actggcgata
    42901 tccagtctgg taaacagcct caaaggcgta tcgggtaggt tactgcgacg agatcgacca
    42961 gatattgcag tcaggtatta ctacaaaggc gttttgtgga gtcctggcta ttttgccaat
    43021 agctgcggag gtgcgccaat atccgtcatc cgccaataca ttgaacaaca gcaaacacct
    43081 ggtcaggtgg aaaaccgcgc cttatatccc cgccctgaag gacggggttt tacggcgcac
    43141 cagataaacc aggccaagcg tatgctggtt gatcaaataa tatcccccaa gcgcagcaat
    43201 attaatattc acctgcaatg ggtcgatacc tggcttaaaa atattgtatt tcttcccttc
    43261 atccaataag gattccatta actgcaagtg cgcatggtta atttctaaga gacgctgtga
    43321 ttttgcataa tgcacacctt tactttgatt ttcactatgc acaattttta aaaaccaagg
    43381 gttagcaata taataatccc atgtaaaatc aataattttc tcaatggctt tttgtggctg
    43441 gttaaccaga tgattaacaa acgcaccgat accaacagcg tagaataatt acataccgca
    43501 caacaagaat gtatggtgga aggcgtggaa gtcattttct ccccgggggc atcgttatat
    43561 ccataatgag cgatttttga tattaatatc tttcaccatc cgctattttc actacttcag
    43621 aaaacaaact tatttttatt aatatcgatt ctttttctgt gaacatcagc tgcgatattt
    43681 ataaaaacat taaacaggta acattacaat gacattacca acgactattt attcatttcc
    43741 tgcatattca ccccattttt cgtccaccga caaaccagta aaattaaaat ttcatcaata
    43801 tgcacgtgct acattactgc caaatcgtgg aagagatcat aattgcgatg gcagacgtac
    43861 tgttgagatc cacaaactag atctctctga ctggcaagca ttcaataagt tagcaacgaa
    43921 gtgtaatgct tacgatggag taacaatgaa tggtgataat tcttttggat ggaaccatga
    43981 agctacatta gataatattc acgcccagaa atacaataaa gctcacgcgg gtgcgaggtt
    44041 aaccgcagaa ctgaaatatt tattgcaaga tgtcgaatcc ttcgaaccca acagtaaata
    44101 cacaatacac gaagtggttt tgggacctgg ttatggtact ccagactata ccggccaaac
    44161 gataggatac gttgtaaccc ttcctgccca aatgcctaat tgctggtcat ctgaactacc
    44221 aacaatcgat ctttatatcg accaacttcg cactgttaca ggcgtttcta atgccctcgg
    44281 attcatcatt gctgcattgc taaacgcgta ttctgattta ccccatgatt tgaaaattgg
    44341 tctacgttcc ttatcaaatt cagcagcaat ctactcgggt ttaggtttcg agcgagtgcc
    44401 gcaggaccga gacataagga gtgatcgtat gcatctaacg ccagcaaacc atcctgactt
    44461 atggacacaa gagaatggtg aatggatcta cttgcgaaac taatacctga cgaaaaatag
    44521 aaagcaaaac gccgaccaat ggtcggcgtt tttacgtctc gttgaataac gaattattca
    44581 gctactacgt ttacgatcac tttcgcgaat acttcgctgt gaacctggaa gctcacttcg
    44641 tgttcgccag tggtacgcag aacgccgttc ggcagacgaa cttcgctctt agccacttca
    44701 acgccagctg cagttacagc gtcagcgatg tcgcgagtac cgatggaacc gaacagttta
    44761 ccttcgtcgc cagctttaga cgcgatggta acagtttcca gtgcattgat tttctcagcg
    44821 cgagcattag cagctgccag aacttcagcc agtttagctt ccagttcagc gcgacgtgct
    44881 tcgaagaatt caatgttttt cttggtagct ggaacagctt taccctgcgg taccaggaag
    44941 ttacgagcat agcccgcttt aacgtttacc tgatcaccca ggctacccag gtttgctact
    45001 ttatcaagca gaataacttg cattacctta tcctctcaaa gtcgtattaa tggaccgtga
    45061 ccgattactg atggcgatca gtgtacggca gcagggacag gtagcgagcg cgtttgatag
    45121 cgcgagccag ctgacgctgg tattttgcac gggtaccggt gatacggctt gggacaatct
    45181 taccgctttc ggtgatgtag tttttcagcg tagcgatatc tttatagtcg atctcttgaa
    45241 cgccttccgc ggtgaaacgg cagaacttgc gacgacggaa ataacgtgcc atatggctag
    45301 tctccagaat ctatcaattc aatctgctcg gcatgcaaaa ccattttgct cagtccgttc
    45361 tttgccttgt ggcatgaaat gaacccctga acggttatgc gactgccgac cgttatactg
    45421 tgagtaatgg cctggttttc gtgtccgcta acaataacgg gcatttggca ccacgcctgc
    45481 cggtgaaaac cggcttcctc ctgcacagaa cgatgctcaa gcacgaactg gcagtgagga
    45541 attcctgatg gactgacctt tcgaagggga gtcctgcaca cggtgccgga caacaccaga
    45601 cggttggtca tcagaaatta ctcttcagaa tccccagctt cagcatcatc agcggtttcg
    45661 tttgcgaaat catcgcgacg ctcacggcgc tcgtctttcg ctttaaccat cggagatgct
    45721 tcggtaacag cgtgcttggt acgcataacc atgctgcgga taacggcatc gttgaagcgg
    45781 aaggtagttt ccagctcatc gatcacttcc tgcggagctt caacgttcat cagaacgtag
    45841 tgtgctttgt gcagtttgtt gatcgggtaa gccagctgac ggcggcccca gtcttccaga
    45901 cggtggatct tgccttctgc accagtgatg gcagcagtgt agcgctcgat catgcccgga
    45961 acctgttcgc tctggtcagg atggaccata aaaacgattt cgtaatgacg catcgaattg
    46021 ctccttacgg attattcagc ctcctgtctg ggtcagccga atcccgggga ggcaaggaac
    46081 gtgttaaagg tcggctgaaa aatgacgcgt tatagtactt gtatgccccg ctaaactcaa
    46141 ggccagccga caaataaatc tcatctttcg ctcaaaagaa ctaactccct gatttgaagt
    46201 tcatcacatt ccgtcacagt gttttttcga acaactgcat cagaaatggt caccatcaac
    46261 ttctttatca ttgattaaaa ttaaatcaga agatcatcac agaggagagc acacaaagtc
    46321 agccgtcgag gaggtatcta tgttcagtcg agttttagcc cttctggctg tgcttttgct
    46381 aagtgcaaat acatgggcag ccattgaaat taataaccac caggccagaa acatggatga
    46441 tgtgcaaagc ttaggcgtga tttatatcaa tcataatttc gccactgaaa gcgaagcgcg
    46501 tcaggcatta aatgaagaga cagatgcgca gggcgcaacg tactaccacg taattctgat
    46561 gcgggaaccg gggagtaacg gcaatatgca cgccagcgcg gatatttatc gctagcacca
    46621 ggtataacca acgaaacatt gccatagttt gctttgcccc cttcgcaggg ggctttttta
    46681 tacggttatt caccgaattg cgacttccgg atctggctca tgagtaatgc gattacgtaa
    46741 gtcgcggcgc ataatctcta ttatccaaaa ccagaaaata tgccccagga tttcagacgc
    46801 atattcgtca aaaggcaatt gagtgagcgg cggcgttaaa ttcagcgccg ggcaaaatat
    46861 accgtggact gccactgtca caataagccc tgctaatatc ccctgccata atttcacttt
    46921 cggaaaaatt tccgcgacaa cacaataccc tatcgcaaaa accagtgaga agatgatatg
    46981 cgtcaccatc accgggttga taatatgttc cgagaatgtg tacacagttt gggttgggtc
    47041 gatacctaaa taatctcgta gaaagatata cggcgggtta aattcatcgc gaccaccgga
    47101 aaatgtgcgc ggtggcaagg ggacttccgc tccccattta acaaatgctg aaataattcc
    47161 tgaaagtaca cccacaagta acgcaacgcc atagcggcga cgttgcggat ccgttctgac
    47221 aaacaatcca ttgatagcca taaaaacacc tgttgtttat acgatttttt aactgaagcg
    47281 gccccggaat cagaccaatt acatcccgca ggaggtaata attccggggc gcactgctta
    47341 cttctgcccg taataggcgt taggaccgtg cttacgcatg aagtgtttat tcatgaggaa
    47401 gctgtcgatg tgattgagtt gtggattaat actgcgcgca atccacgcca ttttcgccac
    47461 ttcttccatc actaccgcgt tatgcaccgc gtcgtgggca tctttccccc aggcgaacgg
    47521 tccgtgctga tacaccacaa ttcccggcgt atgcagcggc tcggcgttgc ccagcgtttc
    47581 gataatcact ttgccagtgt tcagttcata ctcaccctgc acctcttctt cgcttaatcc
    47641 acgcgtacac gggatgtcac caaagaagta gtcagcgtgc gtggtgccta acgccgggat
    47701 cgccagcccc gcctgcgccc atgcggtagc atgagtggag tgggtatgga caatgccgcc
    47761 aagcgacgga taacgacggt agagttcaag atgcgtcgcg gtgtcggaag atgggcgata
    47821 ctccccttcc accaccttac cgctcatatc gaccaccacc atatcgtctg ctttcatggt
    47881 ttcgtaggcg acgccgctgg gcttgatcac caccagcccg cgttcgcggt cgatagcgct
    47941 gacgttgccc caggtaaagg tcaccagccc atagcgcggc agatccatgt tggcttcaaa
    48001 tacctgctgt tttagctttt gcattatgcc gcctccacca tgcccgcttt cgccatgcgc
    48061 gctttcaccc aatcacgcgc tttcgccact tctgccgccg ggtcttccgc cgtttcgctc
    48121 cacatctcaa tcaggtacgg cccgcaatag ccactctgtt tgagcgtttc gaaacaacgt
    48181 tcgaaatcca ctacaccttc gccaaacggc acgtttttga agacgccagg tttggtgtct
    48241 ttcacatgta ccgcgacgat atgcccgatt ccggcctgca actccatctg cacatcgttg
    48301 tcccacgccg acaggttgcc gatatccggg tagagctgga accacgggtt gttgagatag
    48361 tgcgcgtaac ccagcgcctt gctgatggag ttcatcaacg gataatccat gatctccatc
    48421 gccagcgtca cctgcgcgcg gctcgccatc tcaacgctct ctttcaggcc gtcacggaaa
    48481 cgacgacgcg tttcgttatt ggcttcctga tagtaaacgt catagcccgc cagctggatc
    48541 acgcgaatgc caacgtcctg ggcgaactgg atggctttac gcataatctc cagcccctgc
    48601 gcccgcaccg cgtcatcttc gctgcccaac gggaaacgac gatgggcaga aaggcacatg
    48661 gacggcacac gcacgccggt ttcaacaatc gcattcacca gcgccagacg ctgctcgcgg
    48721 ctccagtcga ggcgcgacag gcgctcgtcc gtttcatcta ccgacatctc gacaaaatcg
    48781 aagcccaacg tttttgccag ttgcaggcgt tccagccagc actccccggc ggggagcgct
    48841 ttttcataga tgccaatcgg gatttgtttg gacaacatat ccgctcctta gccccacagt
    48901 tcggcgatgg aacgtttgaa ctgacgtgca gcttcaaccg gagaagcggc atcacggatg
    48961 ctgcgaccag cgataaacac atgaatcgga atacctttga acagcggcag atcttccagc
    49021 gccaggccac cggtgacggt gactttgaag cccatatcgg aaagacgttt gatcgcggta
    49081 atgtccgctt cgccccacgc cacgcctgcg gcctgcgcgt cacggctgcg gtgataaacc
    49141 acctgcccaa tgcctgcgtc acgccactgc tgcgcctgtt cccaggtcca gtaaccggtc
    49201 agttcgatct gcacgtcgcc gttaaactct tttgccacgt ccagcgcacc tttggcggtg
    49261 ttgatatccg cacagcaaat tacggtcacc cagtcagcgt tggcttcgaa gcacatacgc
    49321 gaaaggattt tgcccgcatc ggcaattttg gcgtctgcca gtacgatttt gtgcgggtag
    49381 agcgctttca ggtcacgaac cgcacgcacg ccttcgccca cgcacagaat ggtgcccact
    49441 tcgataatgt cgacttcttc ggcaatcagg cgagtggttt cgtaggcgct atccatagtc
    49501 tggttgtcca gcgcgacttg caacatcggt aatgacatct tcaattcctt cttaagctgc
    49561 cgcgttggtg cggtcaatga gatccagtac ttcctgctcg gtacggcagg cacgtaaacg
    49621 gtcgaaattc tcttcatctt caaacagatt gacgatctgc atgatgccca cttcctggtg
    49681 agtgttggca tcgaccgccg ccatggtgat gaggatatcc accggatcgt tatcttcgtg
    49741 gttgaactcc agcggctttt tcagcgtcac cagcgcaaaa ccggttttct taacgccctc
    49801 ttccgggcga ccgtgcggca ttgccaggcc tggtgcgagc acaaagtacg gaccatgctg
    49861 ttcaaccgca tccagaatcg cctggtagta acgcggctcg acaacatccg ccgccaccag
    49921 caggtcaacg ccgattttta ctgcgtcctg ccatgtctca gcttcagcct gcaggcggat
    49981 ggatttattc tccgccagcg aatcacgtaa tttcatggcg cgtccttact tcacatcctg
    50041 cgggaaatgc gctttgatca cttccagcag tttcgggcca aaatcggcag gagagagcat
    50101 gttgcgcacg ccaaccacgt atttgttgcc ggtcacggtg atttcgcccg caatgtgcgt
    50161 agaagcgatg atgatatccg cgccgctcaa ctcgcttttg tattcgccaa ccgcgcagct
    50221 atttaccgtg tggtcaatgt ttgattgggt taaaaactgg tccactttca tcttcatgat
    50281 catggaactg ccttgtccgt tgccacacac agccagaata cgtacggtca taatcaaaac
    50341 tccttattaa gcagactgtt ctgccagttg tttttctgca tcttcttctg cgcgcagtgc
    50401 gcggccagcg aagaacatat aagccagtgc aattacaatg atgacggcca taaaggcgat
    50461 accgatggag aagaagccct gcatcatcgg cggtgccaga atcgaccagt ccgccatgcc
    50521 catccaggcg ctcataccgg tgagtttcac cgcccagacg cagccaaaga tttcaatcat
    50581 ccccatcacc agacatatct tcagcgccgc acgccagccg ccgaagtggt tagcgaacac
    50641 gccgatggtg gcgttggaga agaacatcgg gataaagccg ggaataatca ggatcgagga
    50701 accgcaggcg accaggatgc caaccgcaat cagctgaccg atggtgcccc acataaagcc
    50761 ccaaaccacg gcgttcggcg cgaagctata gatagccgca cagtcaatcg ccagaaccgc
    50821 accagggatc aggcgctggg agataccgtt aaatgcttca gagagttccg ccacaaacat
    50881 gcgcacgccc tgagtgatga tgaagatcgc caccgcgaag gagaaaccag tttgcaggat
    50941 gtacaccgtc cagttcactt tgcctgccat cgcctgcacg gtgtcgatac cgaaggagag
    51001 cagaatggca ccaaagaaga tggtcatcac aatcgccgtg gagacgatgt tgtcgtggaa
    51061 aatattcagc cagcctggca gtttgaggtc ttcaacgctt tcctcttttt tgccgaggaa
    51121 cggcgcaact ttataggcaa tccatgatgc aaactgttgc tggtgaccga tggagaaacc
    51181 gcagccgtcc gtcacttcct gagtcggctt gtacatcatg ttggaggtaa tgccccagta
    51241 gagcgaaacc agaatcgccg tgcagataat ggttgtccac atggagtagc cgaaaataaa
    51301 caacgtaacg gcaatcagcc ccgcctgctg gaacatgata tgaccagtca gcatgatggt
    51361 acgaataccg gtaatgcgac gcagcagcac gtaacagatg ttcagcgcca gcgctaacaa
    51421 caccgcgtaa cctacccagc tataggcatc gcccatgcgg tcgatggttg ccatcatcga
    51481 cgcgtaagta tcggaaattg cgccgttaat gccgtagact tcggacattt tcgccaccac
    51541 cggtttgaag gtgctggtga ggatgccgga ccctgcctgc aacaacatga aaccaattat
    51601 ggttttaatc gtgcctttaa taataacgct gacacttttg cgcagtagga tgtagcccag
    51661 acaggtcaca atacccagca acaacggggc attggtcatg acctggttaa aaaacacggt
    51721 aaagatgttg tagaggatct ccataacgat ctcctgaaga agaggtaacc gggtattcca
    51781 cacacccgga atgttgtgca ctcactctaa ttttcaaaag taatcacaac aagattattt
    51841 atgattaaat gtgacgcgac ccgcaaataa ttccacatgg atagaatggg attcacacaa
    51901 cgaaacaact attcatttaa attcatttag ttaattgaat tacacattcc attaaatctt
    51961 tccacactca aaatcaacaa ccacttccct ggcaaaaagt caaaaaatgg tcattgcctt
    52021 cctgaaaaaa tagtgtcagg attaatcaaa accaatcaca cattgattcg aattgaacaa
    52081 tcatgaaggt aaatggcgat gagtaaagtg aaaagtatca cccgtgaatc ctggatcctg
    52141 agcactttcc cggagtgggg tagctggttg aatgaagaaa ttgaacaaga acaggtcgct
    52201 ccaggcacat ttgcgatgtg gtggcttggc tgcaccggga tctggttgaa atcggaaggt
    52261 ggcaccaacg tttgcgttga tttctggtgc ggcactggca aacaaagtca cggtaacccg
    52321 ttaatgaaac agggtcacca gatgcagcgc atggctggcg tgaaaaaact gcagccaaac
    52381 ctgcgcacca ccccgtttgt tcttgatccg tttgcgattc gccagatcga cgcggtactg
    52441 gcgactcacg atcacaacga tcatatcgac gttaacgttg ctgctgccgt gatgcagaac
    52501 tgtgctgatg acgtaccgtt cattggaccg aaaacctgtg tggatttgtg gattggctgg
    52561 ggcgtaccga aagagcgttg catcgtggtc aaaccgggcg atgtagtaaa agtgaaagac
    52621 attgaaattc atgcgcttga cgctttcgac cgtactgcac tgatcaccct gcctgccgat
    52681 caaaaagcgg ctggcgtact gccagatggc atggacgatc gcgcagtaaa ctacctgttc
    52741 aaaacccctg gcggttccct atatcacagt ggcgattccc actactccaa ctattatgcg
    52801 aagcacggta acgaacatca gatcgatgtg gcgttaggat cgtatggtga gaacccgcgc
    52861 ggtattaccg acaaaatgac cagcgccgat atgctgcgta tgggtgaagc cctgaatgcg
    52921 aaagtggtta tcccgttcca ccacgacatc tggtcaaact tccaggccga tccgcaagag
    52981 atccgcgtgc tgtgggagat gaaaaaagat cgtctgaagt atggcttcaa gccgtttatc
    53041 tggcaggttg gcggcaaatt tacctggccg ctggataaag acaacttcga gtaccactat
    53101 ccgcgcggtt tcgatgattg cttcactatt gaaccggatc tgccgttcaa gtcattcctg
    53161 taatctgtcg tttataccgg atagcgtgga gaagttcgcg ctatccggcg tagtatttcc
    53221 tggctatttc aaatatcatc taaaaaaatc aaattttatc ggaatagctc atgactgaag
    53281 cacaaagaca tcaaatcctc ctggaaatgc tcgcacaatt gggctttgtg accgttgaga
    53341 aagtcgttga gcgtctggga atttcgcctg ccactgcgcg acgcgatatc aataaacttg
    53401 acgaaagcgg caaactgaaa aaagtgcgca atggcgcaga agctattacc caacagcgcc
    53461 cgcgctggac gccgatgaat ctgcatcagg cgcagaatca cgatgaaaaa gtacgtatcg
    53521 ctaaagcggc ctcgcagctg gttaatccgg gcgaaagcgt agtcatcaac tgcggctcca
    53581 ccgcgtttct gcttgggcgg gaaatgtgtg gcaagccagt gcaaatcatc actaattatc
    53641 taccgctggc aaattacctg atcgatcaag aacatgacag cgtgatcatt atgggcggac
    53701 agtacaacaa aagtcagtcc atcactttaa gcccgcaggg cagcgaaaac agtctctatg
    53761 ccgggcactg gatgtttacc agcggcaaag gactgacagc agaagggttg tataaaaccg
    53821 atatgctgac ggcaatggca gagcagaaga tgctgagcgt ggtagggaaa ctggtggtac
    53881 tggttgatag cagtaagatt ggcgaacgcg cgggaatgct ttttagccgt gccgatcaaa
    53941 ttgatatgct gatcaccggc aaaaatgcta acccggaaat cctgcaacaa ctggaagcgc
    54001 aaggggtcag cattctgcgt gtttaaagat gctggcggaa aaatgtcact gcagcatcta
    54061 acgcctcagg cgtaatgcgg tgacgcacgc ctggctgcca tgaacaggtt agcagtttat
    54121 cccgtcccgt ctcgcttaag gcctgctgca aacgtagtga ttcgtcggca ggcacaacgt
    54181 catcgtcgag gccatgccac agcagtagag gtctgtcact aagttgttcc aggtggtttg
    54241 tcgcttccca ctctgccagc ggcgcgacaa tgttattgaa ttcattctgc tgtgctgtcg
    54301 tttcaggtat cagcggtgga aacagtgaac gggcgagtga tgtaaaatag cccgatccca
    54361 tcatgctggc ggtacatctc accgtggggt ggcgagcggt aatccccagt gccgtcatcg
    54421 cgcccatcga cgcaccaccg actgccagac ggtcatcaag cagccagttt tcttcggcta
    54481 ttgccgcacg taaagtagtg aattcctgca tactttgtag caagatttgc cagaattgat
    54541 ttaaccgccg cgctgcgtca ccactaaaac ggctaccgtg atcgggcgca tccggcatga
    54601 tcactcgcaa accagcctgc gccagcgcaa cggcaaaata gctatacacc agactggatg
    54661 aagtaaagcc gtgataaaaa attacgcacg gtaacggggt atctttttgc ccgacaggat
    54721 aagcatgaag aacgggaata tctgccagct cgcgtgattc tatttcaatc atctgtctct
    54781 cctttttgtc tggtatgaca tgaagaaatc cttagcacaa gtttctgctg gcggtattag
    54841 ttcataatgt tgagatgtgg gttacgcttt cgtcacgttt tcattcgaaa atcgcgtacc
    54901 aggtaacaat tcgggaacat tcccccaaag ttaaattaat aaggcactac actatggtta
    54961 gcaggaaacg taatagcgtt atttaccggt ttgccagttt attattggtg ttgatgttaa
    55021 gtgcctgtag cgcactgcaa ggtacgccac agccagcacc gccagtaacg gaccatccgc
    55081 aagagattcg ccgcgaccag acgcaagggt tacagcgaat aggcagcgta agcacgatgg
    55141 ttcggggttc tccggatgac gcattagcag aaatcagagc gaaagctgtc gctgcaaaag
    55201 ctgattatta cgttgtcgtc atggtggacg aaaccatcgt gacaggacag tggtattcac
    55261 aagccatttt gtaccgtaaa taaatcagac aacttacata gtcagcttta cattgctttg
    55321 cgtccctatg cgtttacctg tgcacaataa attaccggct ggaagcctgg gcgtttatta
    55381 ccgcgatgga atgccctgca acatgtgggg aaacgaaaaa tggagctgac gatgaaacaa
    55441 ttacttgcct caccctcgct gcaattagtg acttatcctg cgagcgccac ggcacagtct
    55501 gcagaattcg ccagtgctga ctgcgtgacg ggcctgaatg aaataggtca gatctcagtt
    55561 agcaatattt caggggatcc gcaggacgtg gaacgtatcg tggcgttaaa ggccgatgaa
    55621 caaggtgcgt catggtaccg cattattacc atgtacgaag accagcagcc tgataactgg
    55681 cgcgtacagg cgatactgta tgcatgagtg tcatctacag caaatgaaca atgccggatg
    55741 cggcgcgagc gccttgtccg gcctacaatt ttcacatatt tcatttagtt aatcgaaacc
    55801 agcgtcgcat cagtcgtata cgcttacaca cacactcccc ccgtcgcccg cagcaataaa
    55861 tcattctgga tctgctctga caaccgtacg ccgccgcgcg tatctaacat cacctgacac
    55921 cacgcctgcg ccattggcgg agaagcatat ttcaacattt gcgcaccgca gcccagcagg
    55981 aatagctgat gagtaatctc tcgcctcagt tcttcagctg gcttacgcag ctgctgctgt
    56041 aaacgacgaa ccgcgcgatc aaaatagcga tcctgccctt tcacttccac aaacgcttcc
    56101 gacaataagt cgtatacgcc cgcttgctta ttgagaacgc gcagcacatc caggcacata
    56161 atattgccgg aaccttccca aatactgttt accggcatct cccggtaaag ccgcggcagc
    56221 tcgctctcct cgcaataacc aatgccgccc agcacctcca tcgcttcggc cacaaacggc
    56281 atacctcttt tgcagatcac aaattttgcc gcaggcgtaa ataaacgcgc ccacagggct
    56341 tctttggcat cggcacgccg gtcccacgct cgcgcaagac gaaacagcaa cgccgtttgc
    56401 ccttcaagct gaagtgccat gcgacttaag acatgacgca taaggggctg ttggatcaat
    56461 ggattaccaa aaacatggcg ttgatgtgca tgataaatcg ccagcgaaaa tgcacggcgc
    56521 atcatggcat ggctacccag ggcgcaatca aaacgcgtca tcccacccat tttcaggatc
    56581 agacgaattc cttccccttc ctgccccaac aaccagccaa tggcatcctg aaactccact
    56641 tcgcagctgg cgttagagcg attacccagc ttatctttca gccgctcgag gcgaatcgcg
    56701 ttgcgttgcc cgtcaggcaa aaagcgcggc acaaaaaagc aggacaaacc gcccgtagtc
    56761 tgcgccagca ccagatgcgc atcgctttgc ggcaccgaga aaaaccattt atgccccacc
    56821 agccgataag agccatcttc caggcgctct gcgcgggtgg tgttgctcat gacatcggaa
    56881 ccgccctgct tttccgtcat tcccatgcca atcaacaaac cgcgtttttg cccacctggc
    56941 aataagtgag aatcgtagcg atcgctcagc agcggcgtgg tccagtcctg aaacggcgcg
    57001 ggtaacatct gtaacagcaa tggcgtggcg gcaaaggtca tggttatcgg acataacgac
    57061 cctgcctcaa cctgtgcgtg caacataaaa cgcgccgcgc gcgccacaaa tgcgccggag
    57121 cgagcgtctt cttcccaggc aagattgtgc acccgattgg tacatagcgc ctgcatcagc
    57181 aggtgccagg cggggtgaaa acgcacatcg tccagacggc gtccttgcgc atcgtagcgc
    57241 aataattcag gcggattcac attcgccagc cgccccagtt caagggattc agccgttcct
    57301 aactgctgac caatactggc tagaaaatcg ctatcccagc cggcaccttc acgcgttacc
    57361 gcttcgcaga gcgcgccatc agacaggtat aagttgctgt tatttaatgg tataggttga
    57421 ttaaaaacgg tgtgagtttg ccagtgcact gtgtctccct ccatcaatgg cagtcaccat
    57481 tagtatggtc actgccatgg attcctgaca gaaagagatt gctaaaacat tcttagccag
    57541 caatgtaatg cggaacgaaa cgagaggtgt ctttggtgat cagcgtgtta tcttcacgga
    57601 tccccattcc gcacgcttca tcatcgacaa tccagctacc gatgagtgtg tagctatcgc
    57661 caaatcgcgg cagaggttga aacgcctggt agatcatcgg ttcatcggcg taatcaccat
    57721 cagcgtggtc aacgacgtta ttctgaccgt cgaaaatggt gacgtttccg ccttcgcgcg
    57781 agtagatcgg tttacgcaca tagctttcgc cagcggcaat ctgcgatttt tcaccctcaa
    57841 accaggatgc aagaaggtta ggatgaccag ggaagaagcg ccaaagcagc ggcattagcc
    57901 ctttattact caagatactt ttccataacg gctccaccca ttgctcgcga cgcttgcaca
    57961 gcagcggacc gttatcgtca cgcatcatcc actccagcgg atacagctta aatgcacgct
    58021 ggatgacatt atcatcaaga tcggtcagta caccgccgac gcccaaaccg agatcttcaa
    58081 tgtagataaa ccgcgactcc tgccctgcct gctgagcgca gtcctgcaag tacagcacgg
    58141 tagtcctgtc ttcatcggtg tcctgacagc agcagaaata aaacggctcc cggctataaa
    58201 gctcgctaaa gcgtgaaatc aggcgttcct gaatggcatt gtactgatcg gcatcacgcg
    58261 gaataatgcc gctgcgccgg gcatcctcca gccacaacca ctggaaataa gccgactcat
    58321 acaacgaggt cggcgtatcg gcgttgtact ccagcagctt caccggcgca ttgccacacc
    58381 aggcaaaatc catccggcca tacagcgaag gatcgcgtgc gcgccagctt tcggcgatca
    58441 catcccagta caacggcggg atcgccagtt gcgtcaggat ctcttcgtct ttaaccgcgc
    58501 gatccaccac ctcaaggcac atctgatgca gttccgcagt cggtttttcg atctgctctt
    58561 caatctggcg cagagtaaaa cggtaagccc gactctcgtc ccaatagatt tcattgtcga
    58621 tgatatgaaa gtcgaaaccg ttgttagcgg cgatctggtc cagatcccgt cgcacaggaa
    58681 cgttgtgtct cagcatgatt agcctcccca atgcccacgg gcgctggaag aacgaccata
    58741 gccgccgcgc gaaacggttg acgctttttt ggtggtaaag ccgcctgaag agtaagactc
    58801 ttttttgcca gaaccggagc gccaggagta atcaccggaa gtgttgcgcc agacggggcg
    58861 ggaagcaaat gaggatccgc cgctgttata gacgaacggc tcatcgcgat ctttacgaat
    58921 aactcggctt aacaaaaatc cagaaacgac cgggatccaa ctctgttcaa cattgtcgta
    58981 gtagcaattt tcgtacttag actgacaatt ctgctgagtc atattcttcg gaacatcggc
    59041 ataaaatgcc gctttggcgt tgttccagcc acgcgcgcaa atgtcggcat tattaccgtc
    59101 atcaatacaa tcctgcactg tcgaataaaa cgttccgtcg ccgtcgttat cgacatcgcc
    59161 actttcactc catcctttga ctattaaaaa aacggcaccg cccattagca ccaacgttaa
    59221 gtatttttgt gcgtagcgat tgcggcgcgg ctcaaaagga ttatgcggtc ttccaatgcg
    59281 actgatcgct ccgtgaccaa ttttactgtt atttcttgat ttgcgttttc tggccatgat
    59341 cgtccattac catgtcatac aagctgcgtt aaaaatacca ccagccagtg cggcggttcc
    59401 cataaacatt cctgctgcgg tattgtgatt aataattttt tcgcttaatg cgggcatata
    59461 aagtctgaca ccagcaaaaa cgagtaactg aatcaccagt gcaatcccgc cccaggcgaa
    59521 atagtctgga atactcaccg cattgattgc cgcactggat aaggggatca cgtaacccaa
    59581 caatgtaccg ctgaatgcca gtgacgccgc ggtattattg tttttgatta attgccattc
    59641 gttgtgcggt gtaattttgg agtagataaa cagaaaaata atcaccatag ccacgccaat
    59701 aaaaaaatag gcactaaagg caagaagtga atccagtata tgcattgtaa acgtccttgt
    59761 aattaaccaa taatatgaag tgatgtcagc gggatatcga cacccaacgc gcgcgaaaat
    59821 aaccactctg gctcgccgag atcgttaaaa gattcctcac catttaacag caaatattcg
    59881 taagtatctt cggttacttg gcgttggtag cccatggtaa aattatggac ctcccatttg
    59941 gcatggtttt gattttctac tttttccagc atgtagacgg gttcgatatt tcccggttct
    60001 tcgctgttaa aaaatcgctg ccagcgtttt tcctgccagt ttaagatcat tgcccccatc
    60061 actttggcgt tgatcgcctc gcgccagtga ctctctttac tgataccgta gctctcttca
    60121 tagacaaaga gcttgatatc atcaatgtca tcaatatctt cgccgccggt ggtattgatt
    60181 tgcagaaatt catcgcctga agtgtagtag cggaaaatct gactaccgcc gcccagatcg
    60241 atgtggctga cagcggctac cgtaaattcc tcacccggca gcgcaatcag caattcatct
    60301 tccagcaaac gaaacgctaa cgtgtcgagc gtaaagccac tattgagatg aagtcccagc
    60361 ggaccgcgag cgatagcagg cttattatcc ttgccaaaca gacgctggaa aaaaccagac
    60421 atattttatc cttaaaatag ttgccagcct tttagcgagg ctggcaaaaa aattactcgc
    60481 cctgttggcg ttgcagtctt gctaatacat cctgggcgct acttttattg ctaccgccaa
    60541 ttccggcttc cgccagcttt tcatcaagat cgcgaccgtc tgcgactttt tccaactgtg
    60601 cagcagcatc caggcgagcc tgacgttcgg cctgacgcgt ttgcaggcgt tttaaggatt
    60661 ctgccgctgt cgaaacgctg gaagatgcgc caacggtaga ggttgttaca gcctgttgtg
    60721 cacgctgcat ggcttcagtg gctttaacga cttccatttg ctgctcaaac tgagcgatac
    60781 gctgcgctgt cgctgtaact gctttttcca cgccatcacg ggagacttcc agattcgaca
    60841 acacttgctc ttcagcggta atgagattct caaggcgcgc gatttcttca gcaacttcgt
    60901 taatcaacga cggattaacg ttcttgctta acgcttccag cgcacgggct tccagactgg
    60961 ctttgcgctc acgtaaatct ttcagcttat cgtgacttaa tttcacccgc gccagcagat
    61021 caacgcgaga ttttccggct ttatcgagtt cagctttagc gtcacgaata tgctgttcca
    61081 gcatgcgcac gccctgggtt tcttcaatgg attcttccgc ctgggagata aacgatttcc
    61141 ccagcgtaaa taaacttttt aaaattccca taaatacccg tccttgtaat tagtgtgaat
    61201 attcttctgt aatttcagcc agatccaatg cgttatctac cagcgaggtt atctcaagca
    61261 ggatatcttc aagagaagat ttaagcgata acgccccgaa aacaatgtaa tactcttcgt
    61321 gttgcacgct ggagattcct accgatgaca acggcatcat cttctgattt cttaataaga
    61381 aggtattaaa ttcatctgga ttgctgatac tacttaccgg acaaataaag gtttcgataa
    61441 tcatttggcg ggaagtaaaa agaatattga tttgcaaatc gccataatca ttca
//
LOCUS       DAPGWB010000010        59126 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.010, whole genome shotgun sequence.
ACCESSION   DAPGWB010000010 DAPGWB010000000
VERSION     DAPGWB010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 59126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 59126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..59126
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.010"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            19..735
                     /locus_tag="RHX79_000626"
     CDS             19..735
                     /locus_tag="RHX79_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HDV2195834.1"
                     /translation="MVAKINLLSRLTPLLFVFAPFLAQSNMTVYPMAVSINSQGEGNV
                     RVISKSNEVQYIKATVFRIDNPSTPQENEVEIKSGDANHLVVMPPKFALPAGSSKTVR
                     FVAMEPEQKEKNYRVKFEAVPSIDDVATDKKDLSMQLTVNLIWGIVVSVPPQQPIAKL
                     EVNAAQKLVNAGNQRLKILTIAYCKNNSKENCKIQTVNKNIFPGQERNLESISGYDKI
                     VVKYNNWITKDNGEFELAVH"
     gene            765..1265
                     /locus_tag="RHX79_000627"
     CDS             765..1265
                     /locus_tag="RHX79_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000755097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2195835.1"
                     /translation="MKKVFAKSLLVAAMFSVAGSALAVQKDITVTANVDAALDMTQTD
                     NTALPKAVEMQYLPGQGLQSYQLMTKIWSNDVTKDVKMQLVSPAQLVQSLDASKIVPL
                     TVTWGGEEIKADAATTFTATKIFASDALTNGSLAKNLMFAQTTKGVLETGIYRGVVSI
                     YLSQDI"
     gene            1357..4041
                     /locus_tag="RHX79_000628"
     CDS             1357..4041
                     /locus_tag="RHX79_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TcfC E-set like domain-containing protein"
                     /protein_id="HDV2195836.1"
                     /translation="MDKKLLALLILASLSPAEATLTKIPAGFEVIAQGQQEYIEVYFS
                     GKSLGKYYAMVNLDTVTFLDPASLYNKLELDVDDQKIAHIVKEKLSQPLARHGELACG
                     YVRTDSGCGFLNTDTLEIIYNDEESSATLFINPQWNSAFDAKSLYLNPDKNTVNAFIH
                     QQDINVLAQDDYQSLSIQGNGALGITENSYIGAHWNFNGYDADDVSDSNADVSDLYYR
                     YDFLRRYYVQAGRMDNRTLFNAQGGNFTFNFLPLGAIDGMRIGSTLSYLNQAQSQQGT
                     PVMVLLSRNSRVDAYRNEQLLGSFYLNSGSQFIDTSSFPPGSYSVALKVYENNQLTRT
                     ELVPFTKTGGLTDGNAQWFLQAGKTTSQVSDDESSAYQLGVRLPLHPQYELYAGLANA
                     DDVSAFELGNNWTADLGGVGNLAISASVFRNDDGGKGDMQQANWSNPGWPTLGFYRTN
                     SDGDACTTDSRESYNALSCYESISATVSQNFVGWNMMLGYTRTQNNTDDSLRWDKQQS
                     FENNYLRQTTAQSISETVQLSASRAFVMRDWILSTSVGVFHRNDNGGDNDDNGLYLSF
                     SLSDTPTMDSNNNSHSTNVSTDYRYSEQDGDQTSWQLSHTFYNDSFSHKELGVTVGGL
                     NTDTINSAVNGRWDGQYGNVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGA
                     SGTDDLLGAVLVDVKGFSEQDEESQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGF
                     VEVNDSSQGNQQGTTNIINGAGNRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKK
                     FPIVGLNSAMLLVAEDGGFTLEINGSEKELYLLSGQQFLKCPLSVVKKRASIRYSGDV
                     TCSVVTYSQLPESIQVQAQLKQPKLRGNVQTAQREVAP"
     gene            4038..5126
                     /locus_tag="RHX79_000629"
     CDS             4038..5126
                     /locus_tag="RHX79_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001352530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein CblD"
                     /protein_id="HDV2195837.1"
                     /translation="MRNRLIAAILGLFGTLTGVQAAPDVTSEITYDLASGRADYYFWK
                     DEASAGNNGYMWYECSYPDLQQTCTANGNISTVQIYLTEQRSGMRWPVKLKGFKTAIV
                     SSDEAPPGCKGGKGLQTNLKDSNRSSCTEDGQHYYIYDTKFLTLYLEQTEMKNLPIGG
                     VWKGKVKLHSNSPAQDYFANITLNTLDPNHIDVFFPEFAHATPRVQLDLHPTGSVNGS
                     NYAQDLTMLDMCLYDGFNGNAISYEIMLKDEGRPAAGRRDGYFSIYRQGGTTTDEGER
                     IDYRVKMYNPETGGQIDVRNNENMVWNSINLKRVRPVVLPGIRYAVMCVPTPLTLAVD
                     KFSVMDKQAGYYMGKLSVIFTPSLPTIN"
     gene            complement(5214..6512)
                     /gene="exuT"
                     /locus_tag="RHX79_000630"
     CDS             complement(5214..6512)
                     /gene="exuT"
                     /locus_tag="RHX79_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708898.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexuronate transporter ExuT"
                     /protein_id="HDV2195838.1"
                     /translation="MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNIST
                     QQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLA
                     IARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM
                     HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKM
                     SVGQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFA
                     DLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCI
                     GGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFALVVGALADTIGFSP
                     LFAVLAVFDLLGALVIWTVLQNKPAIEVAQETHNNPAPQH"
     gene            6995..8407
                     /gene="uxaC"
                     /locus_tag="RHX79_000631"
     CDS             6995..8407
                     /gene="uxaC"
                     /locus_tag="RHX79_000631"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HDV2195839.1"
                     /translation="MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAED
                     YRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYH
                     WTHLELRRPFGITGKLLSPSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDP
                     IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADL
                     QTALTKRLDHFAAHGCKVSDHALDVVMFAEANEAELDSILARRLAGEPLSEHEVAQFK
                     TAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLL
                     SKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMER
                     QITQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLG
                     EMVKNICFNNARDYFAIELN"
     gene            8422..9909
                     /gene="uxaA"
                     /locus_tag="RHX79_000632"
     CDS             8422..9909
                     /gene="uxaA"
                     /locus_tag="RHX79_000632"
                     /EC_number="4.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase"
                     /protein_id="HDV2195840.1"
                     /translation="MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKF
                     ALTDIAKGANVIKYGLPIGYALADIAAGEHVHAHNTRTNLSDLDQYRYQPDFQDLPAQ
                     AADREVQIYRRANGDVGVRNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLF
                     SHTYGCSQLGDDHINTRTMLQNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPER
                     VHFMICQQQDDEIEAGIEHLHQLYNVMRNDKREPGKLSELKFGLECGGSDGLSGITAN
                     PMLGRFSDYVIANGGTTVLTEVPEMFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIA
                     HDQPIYENPSPGNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGERLKTPGLNLLSAP
                     GNDAVATSALAGAGCHMVLFSTGRGTPYGGFVPTVKIATNSELAAKKKHWIDFDAGQL
                     IHGKAMPQLLEEFIDTIVEFANGKQTCNERNDFRELAIFKSGVTL"
     gene            9992..10543
                     /locus_tag="RHX79_000633"
     CDS             9992..10543
                     /locus_tag="RHX79_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HDV2195841.1"
                     /translation="MTAYWLAQGVGVIAFLIGITTFFNRDERRFKKQLSVYSAVIGVH
                     FFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIG
                     TIVSTWALFRCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFW
                     RMQKRGIDPFKVEKTPPAVDERG"
     gene            complement(10548..11792)
                     /gene="sstT"
                     /locus_tag="RHX79_000634"
     CDS             complement(10548..11792)
                     /gene="sstT"
                     /locus_tag="RHX79_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDV2195842.1"
                     /translation="MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVG
                     LLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF
                     SFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG
                     FALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQL
                     LVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMA
                     LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVA
                     SLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTD
                     VLFTAAACQAEDDRLANSALRN"
     gene            complement(12191..13156)
                     /gene="alx"
                     /locus_tag="RHX79_000635"
     CDS             complement(12191..13156)
                     /gene="alx"
                     /locus_tag="RHX79_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family membrane protein Alx"
                     /protein_id="HDV2195843.1"
                     /translation="MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAW
                     SLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS
                     YFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMAL
                     AHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVI
                     FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFI
                     GIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRGG"
     gene            complement(13439..14425)
                     /locus_tag="RHX79_000636"
     CDS             complement(13439..14425)
                     /locus_tag="RHX79_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417558.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDV2195844.1"
                     /translation="MIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFAN
                     DFSVEHLFTSLEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAE
                     VDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYL
                     DGENPNTFNPSFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMD
                     YGDFSVTLQHSKVSDSVLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHI
                     NTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL"
     gene            complement(14504..15187)
                     /locus_tag="RHX79_000637"
     CDS             complement(14504..15187)
                     /locus_tag="RHX79_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vancomycin high temperature exclusion protein"
                     /protein_id="HDV2195845.1"
                     /translation="MQPRLLLRICFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQL
                     TWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDE
                     ASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWL
                     AKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPF
                     SEHGCPAKE"
     gene            complement(15264..15767)
                     /locus_tag="RHX79_000638"
     CDS             complement(15264..15767)
                     /locus_tag="RHX79_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDV2195846.1"
                     /translation="MNNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATD
                     KALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIR
                     VATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQL
                     SLGQDKI"
     gene            15852..16988
                     /gene="rlmG"
                     /locus_tag="RHX79_000639"
     CDS             15852..16988
                     /gene="rlmG"
                     /locus_tag="RHX79_000639"
                     /EC_number="2.1.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417555.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(1835)-N(2))-methyltransferase
                     RlmG"
                     /protein_id="HDV2195847.1"
                     /translation="MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI
                     RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD
                     YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG
                     PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR
                     FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNM
                     PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING
                     ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKTVKLGRRR"
     gene            17179..17256
                     /locus_tag="RHX79_000640"
                     /pseudo
     CDS             17179..17256
                     /locus_tag="RHX79_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311992.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HigB family
                     toxin"
     gene            17258..17674
                     /gene="higA"
                     /locus_tag="RHX79_000641"
     CDS             17258..17674
                     /gene="higA"
                     /locus_tag="RHX79_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HigA"
                     /protein_id="HDV2195848.1"
                     /translation="MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLND
                     PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIG
                     SKSMVSRVLSGKRKLTLEHAKKLAARFGISPALFID"
     gene            complement(17719..19737)
                     /gene="fadH"
                     /locus_tag="RHX79_000642"
     CDS             complement(17719..19737)
                     /gene="fadH"
                     /locus_tag="RHX79_000642"
                     /EC_number="1.3.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
                     /protein_id="HDV2195849.1"
                     /translation="MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFY
                     AERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQI
                     LHTGRYSYQPHLVAPSALQAPINRFVPHELTHEEILQLIDDFAHCAQLAREAGYDGVE
                     VMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSM
                     LDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFTWVTRKL
                     KGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINT
                     CIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAIN
                     AAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYHRMIEVTGVTLKLNHTVT
                     ADQLQAFDETILASGIVPRVPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGF
                     DTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKAS
                     KPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNMVIC
                     AGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI"
     gene            complement(20063..22414)
                     /gene="ygjK"
                     /locus_tag="RHX79_000643"
     CDS             complement(20063..22414)
                     /gene="ygjK"
                     /locus_tag="RHX79_000643"
                     /EC_number="3.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HDV2195850.1"
                     /translation="MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDY
                     DYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQD
                     GKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDG
                     ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEY
                     QVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAF
                     YLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVT
                     GRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDL
                     IAWNLSPERGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKAWLAEMYPKLVAYHDWWL
                     RNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGNKEETQSGLNNYARVVEKGQYDS
                     LEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLG
                     YSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQ
                     FYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFN
                     TFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAK
                     GLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ"
     gene            complement(22431..23501)
                     /gene="ygjJ"
                     /locus_tag="RHX79_000644"
     CDS             complement(22431..23501)
                     /gene="ygjJ"
                     /locus_tag="RHX79_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgjJ"
                     /protein_id="HDV2195851.1"
                     /translation="MKLITAPCRALLALPFCYAFSAAGEEARPAEHDDTKTPAITSTS
                     SPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADH
                     DGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGY
                     VIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMM
                     NGYIQYDLAEGITWMNGLEITDGTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSES
                     GMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWYEYGGGRFATAFDSR
                     FYMKNASHDPSDQIFLMQYFYW"
     gene            complement(23635..25068)
                     /locus_tag="RHX79_000645"
     CDS             complement(23635..25068)
                     /locus_tag="RHX79_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDV2195852.1"
                     /translation="MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFF
                     LATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTS
                     LLPRVIAYASYAFLGYEYIMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLM
                     LLLTLSYILLAGTALVGGVQPADPITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVY
                     VNDVKGGSKSFVKVIILAGIFIGVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAY
                     FGLPEALMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFGKKTVELNENGVPA
                     RAAWIQFLIVIPLMIIPMLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRAKLD
                     HLPRDFRMGSRRTGIIVVSMLIAIFAVGFVASTFPTGANILTIIFYNVGGIVIFLGFA
                     WWKYSKYIKGLTAEERHIEATPASNVD"
     gene            complement(25131..25580)
                     /locus_tag="RHX79_000646"
     CDS             complement(25131..25580)
                     /locus_tag="RHX79_000646"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit beta"
                     /protein_id="HDV2195853.1"
                     /translation="MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDS
                     LTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLK
                     GCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK"
     gene            complement(25577..28669)
                     /gene="ebgA"
                     /locus_tag="RHX79_000647"
     CDS             complement(25577..28669)
                     /gene="ebgA"
                     /locus_tag="RHX79_000647"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311985.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit alpha"
                     /protein_id="HDV2195854.1"
                     /translation="MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPL
                     SGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVP
                     FVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF
                     DISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRT
                     DFDEAYCDATLSCEVVLENLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASF
                     AFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYV
                     MLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGL
                     FVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNES
                     GYGCNIRAMYHAAKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEYPHPKPR
                     IICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDNGNVWYKFGGD
                     YGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHALDLTHGELKVENKLWFTT
                     LDDYTLHAEVRVEGETLATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSR
                     TRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLEDDRLSCTVRGYNFAITFSKM
                     SGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQ
                     SDGEVLIISRTVIAPPVFDFGMHCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFT
                     MGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRW
                     TALTNRHGNGLLVVPQRPINFSAWRYTQENIHAAQHCNELQRSDDITLNLDHQLLGLG
                     SNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQNLASYEFGAGFFSTNLHSENKQ
                     "
     gene            complement(28853..29836)
                     /gene="ebgR"
                     /locus_tag="RHX79_000648"
     CDS             complement(28853..29836)
                     /gene="ebgR"
                     /locus_tag="RHX79_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator EbgR"
                     /protein_id="HDV2195855.1"
                     /translation="MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEK
                     LEYKTSSARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTN
                     CYEHSGLPDIKNVTGILIVGKPTPALRAAACALTDNICFIDFHEPGSGYDAVDIDLAR
                     ISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSS
                     SSGYELAKQMLAREDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTAR
                     FTFPPLSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR"
     gene            30055..30387
                     /locus_tag="RHX79_000649"
     CDS             30055..30387
                     /locus_tag="RHX79_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HDV2195856.1"
                     /translation="METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGEKTLQ
                     TVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERM
                     MPAGVRVV"
     gene            complement(30429..31808)
                     /gene="ygjG"
                     /locus_tag="RHX79_000650"
     CDS             complement(30429..31808)
                     /gene="ygjG"
                     /locus_tag="RHX79_000650"
                     /EC_number="2.6.1.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417544.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine aminotransferase"
                     /protein_id="HDV2195857.1"
                     /translation="MNRLPSSASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKE
                     HVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPV
                     VVSAVQNQLAKQPLHSQELLDPLRAMLAKTVAALTPGKLKYSFFCNSGTESVEAALKL
                     AKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAM
                     RTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTG
                     MGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFG
                     GNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMA
                     IEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAAHKALA
                     AMRVSVEEA"
     gene            32226..33746
                     /gene="aer"
                     /locus_tag="RHX79_000651"
     CDS             32226..33746
                     /gene="aer"
                     /locus_tag="RHX79_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerotaxis sensor receptor Aer"
                     /protein_id="HDV2195858.1"
                     /translation="MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFT
                     LQELQGQPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPM
                     VREGKISGYMSIRTRATDEEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLP
                     LRWRARGVMTLMFILLAAMLWFVAAPVVTYFLCVLVVLLASACFEWQIVRPIENVARQ
                     ALKVATGERNSVEHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAK
                     GTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAM
                     TTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGE
                     VRHLASRSANAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQIS
                     HSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLEDAVTVLH"
     gene            complement(33900..34523)
                     /gene="nfeR"
                     /locus_tag="RHX79_000652"
                     /gene_synonym="yqjI"
     CDS             complement(33900..34523)
                     /gene="nfeR"
                     /locus_tag="RHX79_000652"
                     /gene_synonym="yqjI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NfeR"
                     /protein_id="HDV2195859.1"
                     /translation="MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCG
                     GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP
                     TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ
                     NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD"
     gene            34800..35564
                     /gene="nfeF"
                     /locus_tag="RHX79_000653"
     CDS             34800..35564
                     /gene="nfeF"
                     /locus_tag="RHX79_000653"
                     /EC_number="1.16.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent ferric chelate reductase"
                     /protein_id="HDV2195860.1"
                     /translation="MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDG
                     FTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAID
                     FFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
                     LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYF
                     IWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK"
     gene            complement(35618..35693)
                     /locus_tag="RHX79_000654"
     tRNA            complement(35618..35693)
                     /locus_tag="RHX79_000654"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(35658..35660),aa:Ile,seq:cat)
     gene            35818..36324
                     /gene="mug"
                     /locus_tag="RHX79_000655"
     CDS             35818..36324
                     /gene="mug"
                     /locus_tag="RHX79_000655"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HDV2195861.1"
                     /translation="MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQA
                     GFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQ
                     ALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD
                     QALVVRGR"
     gene            complement(36402..38243)
                     /gene="rpoD"
                     /locus_tag="RHX79_000656"
     CDS             complement(36402..38243)
                     /gene="rpoD"
                     /locus_tag="RHX79_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDV2195862.1"
                     /translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI
                     IQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYM
                     REMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSD
                     LITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAR
                     EKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVM
                     MDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVS
                     EEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAK
                     KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
                     RIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISME
                     TPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGID
                     MNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD"
     gene            complement(38438..40183)
                     /gene="dnaG"
                     /locus_tag="RHX79_000657"
     CDS             complement(38438..40183)
                     /gene="dnaG"
                     /locus_tag="RHX79_000657"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDV2195863.1"
                     /translation="MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHN
                     EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG
                     SGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGF
                     APPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGF
                     GGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQY
                     GINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ
                     LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLS
                     TLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT
                     MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR
                     GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE
                     ERLELWTLNQELAKK"
     gene            complement(40294..40509)
                     /gene="rpsU"
                     /locus_tag="RHX79_000658"
     CDS             complement(40294..40509)
                     /gene="rpsU"
                     /locus_tag="RHX79_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDV2195864.1"
                     /translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE
                     RKRAKASAVKRHAKKLARENARRTRLY"
     gene            40746..41759
                     /gene="tsaD"
                     /locus_tag="RHX79_000659"
     CDS             40746..41759
                     /gene="tsaD"
                     /locus_tag="RHX79_000659"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001264383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDV2195865.1"
                     /translation="MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVP
                     ELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAW
                     NVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDD
                     AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFA
                     ANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLR
                     AKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAEL
                     PAA"
     gene            complement(41802..43265)
                     /gene="ttdT"
                     /locus_tag="RHX79_000660"
     CDS             complement(41802..43265)
                     /gene="ttdT"
                     /locus_tag="RHX79_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-tartrate/succinate antiporter"
                     /protein_id="HDV2195866.1"
                     /translation="MKPSTEWWRYLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVI
                     VGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSV
                     IWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSA
                     RGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLL
                     IGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETEL
                     QAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSN
                     KAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRY
                     FFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYG
                     SGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL"
     gene            complement(43313..43918)
                     /gene="ttdB"
                     /locus_tag="RHX79_000661"
     CDS             complement(43313..43918)
                     /gene="ttdB"
                     /locus_tag="RHX79_000661"
                     /EC_number="4.2.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit beta"
                     /protein_id="HDV2195867.1"
                     /translation="MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELK
                     RPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKMVVGK
                     GGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEF
                     GPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK"
     gene            complement(43915..44826)
                     /gene="ttdA"
                     /locus_tag="RHX79_000662"
     CDS             complement(43915..44826)
                     /gene="ttdA"
                     /locus_tag="RHX79_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit alpha"
                     /protein_id="HDV2195868.1"
                     /translation="MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAE
                     TSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVE
                     EATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPG
                     RSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPI
                     GSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTG
                     CWAHRRGTLLVHADLTFENLSHTRSAL"
     gene            45033..45965
                     /gene="ttdR"
                     /locus_tag="RHX79_000663"
                     /gene_synonym="dan"
     CDS             45033..45965
                     /gene="ttdR"
                     /locus_tag="RHX79_000663"
                     /gene_synonym="dan"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TtdR"
                     /protein_id="HDV2195869.1"
                     /translation="MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQIL
                     ENTLATTLLNRSARGVALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGC
                     SFGFGRSHIAPAITELMRNYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAH
                     LLTKNKRILCAAPEYLQKYPQPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVK
                     VSGHLSSNSGEIVLQWALEGKGIMLRSEWDVLPFLESGKLVQVLPEYAQSANIWAVYR
                     EPLYRSMKLRVCVEFLAAWCQQRLGKPDEGYQVM"
     gene            complement(45978..46595)
                     /gene="plsY"
                     /locus_tag="RHX79_000664"
     CDS             complement(45978..46595)
                     /gene="plsY"
                     /locus_tag="RHX79_000664"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDV2195870.1"
                     /translation="MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGAT
                     NVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGF
                     KGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKP
                     QFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE"
     gene            46700..47068
                     /gene="folB"
                     /locus_tag="RHX79_000665"
     CDS             46700..47068
                     /gene="folB"
                     /locus_tag="RHX79_000665"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional dihydroneopterin
                     aldolase/7,8-dihydroneopterin epimerase"
                     /protein_id="HDV2195871.1"
                     /translation="MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKS
                     DDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAV
                     ARAANVGVIIERGNNLKENN"
     gene            47158..47979
                     /gene="bacA"
                     /locus_tag="RHX79_000666"
     CDS             47158..47979
                     /gene="bacA"
                     /locus_tag="RHX79_000666"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDV2195872.1"
                     /translation="MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDT
                     AKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPA
                     VVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMI
                     GCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGF
                     LTTGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF"
     gene            complement(48142..49380)
                     /gene="cca"
                     /locus_tag="RHX79_000667"
     CDS             complement(48142..49380)
                     /gene="cca"
                     /locus_tag="RHX79_000667"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused tRNA nucleotidyltransferase/2',3'-cyclic
                     phosphodiesterase/2' nucleotidase/phosphatase Cca"
                     /protein_id="HDV2195873.1"
                     /translation="MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR
                     DFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD
                     NGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLTLM
                     REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA
                     PARWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPA
                     GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR
                     VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL
                     TRRRIAAVASWKEQRCPKPD"
     gene            complement(49444..50064)
                     /locus_tag="RHX79_000668"
     CDS             complement(49444..50064)
                     /locus_tag="RHX79_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDV2195874.1"
                     /translation="MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHY
                     RLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQV
                     KTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASV
                     QLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLLPTRKRKDRWMN"
     gene            50306..51607
                     /gene="ygiF"
                     /locus_tag="RHX79_000669"
     CDS             50306..51607
                     /gene="ygiF"
                     /locus_tag="RHX79_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic triphosphatase"
                     /protein_id="HDV2195875.1"
                     /translation="MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETP
                     DNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEV
                     WPNGELPADLASRVQPLFSTDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICELE
                     LELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAK
                     ADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAIGLVRHTLMLFGGIVPRKA
                     STHLRDLLTQCEATIASAVSAVTAVYSTKTAMAKLALTEWLVSKAWQPFLDAKAQSKM
                     SDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQ
                     AWLENWQGLRHAIATGQRIEIEHFRNEANNQEPFWLHSGKR"
     gene            51630..54470
                     /gene="glnE"
                     /locus_tag="RHX79_000670"
     CDS             51630..54470
                     /gene="glnE"
                     /locus_tag="RHX79_000670"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HDV2195876.1"
                     /translation="MKPLSSPLQQYWQTVVERLPEPLAEKSLSAQAKSVLTFSDFVQD
                     SVIAHPEWLTELESQSPQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVRIA
                     WAQTLALVTEESILQQLSHLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGM
                     GKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGF
                     VYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELR
                     AMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQ
                     LIRGGREPSLQSRSLLPTLSAIAALHLLSENDAEQLRVAYLFLRRLENLLQSINDEQT
                     QTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSE
                     QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLIADFRKELDKRTIGPRGRQVLDHLM
                     PHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFRAALKHLISLCAASPMIA
                     SQLARYPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQ
                     LLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVARYGKPNHLNDREGRG
                     FAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFS
                     TRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQ
                     LTAHFDAVRREIMTLPREGKTLQTEVREMREKMRAHLGNKHRNRFDIKADEGGITDIE
                     FITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHL
                     ALQELPGHVPEDCFTAERELVRASWQKWLVEE"
     gene            54518..55951
                     /gene="hldE"
                     /locus_tag="RHX79_000671"
     CDS             54518..55951
                     /gene="hldE"
                     /locus_tag="RHX79_000671"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HDV2195877.1"
                     /translation="MKVTLPEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVN
                     TIEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHP
                     TITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASV
                     QQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMK
                     LIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAA
                     GNSLEEACFFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELKLAVAA
                     ARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNP
                     LEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANG
                     GEVLVLNFEDGCSTTNIIKKIQQDKKG"
     gene            complement(56071..56130)
                     /gene="ibsE"
                     /locus_tag="RHX79_000672"
     CDS             complement(56071..56130)
                     /gene="ibsE"
                     /locus_tag="RHX79_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsE"
                     /protein_id="HDV2195878.1"
                     /translation="MMKFVIILVVLLLLSFPTY"
     gene            complement(56447..56506)
                     /locus_tag="RHX79_000673"
     CDS             complement(56447..56506)
                     /locus_tag="RHX79_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HDV2195879.1"
                     /translation="MMKLVIILIVLLIVSFAAY"
     gene            complement(56745..58406)
                     /locus_tag="RHX79_000674"
     CDS             complement(56745..58406)
                     /locus_tag="RHX79_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin family protein"
                     /protein_id="HDV2195880.1"
                     /translation="MDDIVNSVPSWMFTAIIAVCILFIIGIIFARLYRRASAEQAFVR
                     TGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFF
                     VRVKPSVEGIATAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENF
                     VQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRR
                     ERNEVEQDVEVAVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEA
                     ERRREAEQTRILAERQIQETEIEREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKS
                     IAIAAKSEQQSQAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETK
                     AVELTVRAKAEKEAAEMQAAAIVELAEATRKKGLAEAEAQRALNDAISVLSDEQTSLK
                     FKLALLQALPAVIEKSVEPMKSIDGIKIIQVDGLNRGSAAGDANTGNVGGGNLAEQAL
                     SAALSYRTQAPLIDSLLNEIGVSGGSLAALTSPLTSTTPVAENVE"
     gene            complement(58433..59062)
                     /locus_tag="RHX79_000675"
     CDS             complement(58433..59062)
                     /locus_tag="RHX79_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1449 family protein"
                     /protein_id="HDV2195881.1"
                     /translation="MILFADYNTPYLFAISFVLLIGLLEILALICGHMLSGALDAHLD
                     HYDSITTGHISQALHYLNIGRLPALVVLCLLAGFFGLIGILLQHACIMVWQSPLSNLF
                     VVPVSLLFTIIAVHYTGKIVAPWIPRDHSSAITEEEYIGSMALITGHQATSGNPCEGK
                     LTDQFGQIHYLLLEPEEGKFFTKGDKVLIICRLSATRYLAENNPWPQIL"
BASE COUNT        14196 a        15047 c        15743 g        14140 t
ORIGIN      
        1 ttgtaagatc aaatttatat ggtggcgaaa attaatctct tatcacggct tacgccgctt
       61 ttattcgtgt tcgctccttt tttggcacag tcaaatatga ctgtttatcc tatggctgtt
      121 tccattaata gtcagggtga aggcaacgtt cgcgtaatat ctaaaagtaa tgaagttcag
      181 tacatcaagg cgacagtatt ccgtatcgat aatccatcga cgcctcagga aaatgaagtt
      241 gagattaaat ccggtgatgc aaatcatctg gttgttatgc cacctaaatt tgctttacca
      301 gccggtagta gcaaaaccgt acgttttgtt gcgatggaac cagagcaaaa agagaaaaat
      361 tatcgcgtta aatttgaagc ggttcccagt attgatgacg ttgccacaga taaaaaagat
      421 ctctctatgc agttaacagt taacttaatt tgggggattg ttgttagtgt tccacctcag
      481 caacctattg ctaagttaga agtaaatgct gcccaaaaat tagttaatgc agggaatcaa
      541 cgcttaaaga ttttaacgat cgcttattgt aaaaataata gcaaagaaaa ttgtaagata
      601 cagaccgtaa ataaaaacat cttccctggt caggaaagaa atcttgaaag catatctggc
      661 tacgacaaaa tcgttgtcaa atataataac tggatcacca aagataatgg cgagtttgaa
      721 ctggcggtcc attaattatc attgtaataa acgaaggaat agtaatgaaa aaggtatttg
      781 caaaatctct tctggtcgca gcgatgtttt ctgttgcagg ctccgcattg gcagtacaaa
      841 aggatattac tgtaacggcc aacgttgatg ccgctctgga tatgacacag accgataaca
      901 ccgcgttgcc gaaagcagta gaaatgcaat atctgccggg gcagggtctg caatcttacc
      961 agttgatgac caaaatctgg tctaacgacg ttaccaaaga tgtaaaaatg cagttagttt
     1021 ccccggcgca actggttcaa agcctggatg ctagcaagat tgttccgctg acagtaacct
     1081 ggggcggtga agaaattaaa gctgatgcgg caaccacttt taccgcaacc aaaatctttg
     1141 cttccgatgc gttaactaac ggttctctgg ctaaaaacct gatgtttgct caaaccacca
     1201 aaggtgttct ggagacaggc atctaccgtg gtgtagtaag catttatctg tctcaggata
     1261 tctaatccag ataacagaat taacacgtaa caaagggagg ggtagccctc ccttatttta
     1321 actgttttag tatttgttat ggatttcagg attgccatgg ataaaaaatt actggctctt
     1381 ttgatcctgg cgagtctcag cccggcagag gcgacattaa ccaaaattcc cgcagggttt
     1441 gaggttattg ctcagggaca gcaggagtat atcgaggttt atttttcagg gaaaagtctc
     1501 ggtaaatatt atgcaatggt taatcttgat accgtaacat ttcttgatcc agcaagtcta
     1561 tataacaagc tggaactgga tgtagacgat cagaaaatcg cgcatatagt gaaagaaaaa
     1621 ttatcgcagc cgctagctcg ccacggtgaa ttggcttgcg gttatgtacg tactgactca
     1681 gggtgtggtt ttctgaatac cgatacgctg gaaataatct ataatgatga agaaagttcg
     1741 gcaacgttgt ttattaatcc gcaatggaat tcagctttcg atgcgaagtc attatattta
     1801 aatccagaca aaaatactgt taatgctttt atacatcagc aagacatcaa tgttctggca
     1861 caggatgatt accaatcgtt gtctattcag ggaaacggtg cgctgggaat aacagaaaat
     1921 agttatattg gtgcacactg gaatttcaac ggttatgatg cagatgatgt cagtgacagt
     1981 aatgctgacg tcagcgatct ctattatcgt tatgattttt tacgtcgtta ttatgtgcag
     2041 gcgggtcgca tggacaaccg cacactattt aatgcacaag gcgggaactt tacctttaac
     2101 tttctgccac tcggtgcaat tgatgggatg cgtatcgggt cgacactgag ctatttaaac
     2161 caggcgcaaa gccagcaagg aaccccagta atggttctgc tttcgcgcaa ttctcgtgtt
     2221 gacgcttatc gtaatgagca acttttggga tcgttttatc tcaatagtgg ttcgcaattt
     2281 attgatacca gttcctttcc gcctggcagc tacagcgtgg cattaaaagt ctacgaaaat
     2341 aaccaactca cccgcaccga gcttgtgccg tttaccaaaa ccggcggtct gactgacgga
     2401 aatgcgcaat ggttcttaca ggcaggtaaa actacatcac aggtttctga tgatgaaagt
     2461 tcagcttatc agctaggagt acgcctgcca ttacatccgc aatatgagct ctacgcaggg
     2521 ctggcgaatg ccgatgatgt gagtgctttc gagttaggta ataactggac ggcagattta
     2581 ggcggggtgg ggaatcttgc aatcagcgcc agcgtgttcc gtaacgatga cggcggcaaa
     2641 ggtgatatgc aacaggccaa ctggagtaat ccgggatggc cgacgttggg cttttatcgg
     2701 accaactctg acggcgatgc ttgtacaacc gacagcagag agagctataa cgccttaagc
     2761 tgttatgaaa gtatttccgc gacggtttca cagaattttg tcggctggaa tatgatgctg
     2821 ggttataccc gcacacaaaa taacactgat gatagtttgc gttgggataa acagcagagc
     2881 tttgaaaata actatcttcg ccagacaaca gcgcaaagta tctctgaaac tgtacaactt
     2941 agcgcttccc gcgcttttgt gatgcgtgac tggattttga gtacgtcagt cggtgttttc
     3001 catcgtaatg acaacggtgg cgataacgac gacaacggct tgtacttatc gttttcgtta
     3061 tctgacacgc caacgatgga tagcaataac aacagccatt caacaaatgt gtctacggat
     3121 tatcgttata gcgaacagga tggcgatcaa acgtcatggc agttatcgca taccttttat
     3181 aacgattcat tcagccataa agaacttggc gtaaccgtcg gaggcctgaa caccgatacc
     3241 ataaacagcg cggttaacgg gcgttgggat gggcaatacg gaaatgtcta cgctaccgta
     3301 tctgatagtt atgaccgtaa gaatcatgat catctttcgg cctttacggg cacttatagc
     3361 tctacgctgg ctgtcagtcg ctatggcgtt aatttgggag ccagtggtac agacgatttg
     3421 ctgggtgcgg tactggtgga tgtgaaaggc ttctctgaac aggatgaaga gagtcaggat
     3481 ctgcaactcg aagcgcgggt ggcaggcagc cgaactttgc agcttggtca aagtgacagt
     3541 gtgttgttcc cttatcctgg atttcagtct ggttttgttg aggttaacga cagtagccag
     3601 ggcaatcagc aggggacaac aaacatcatt aacggtgcag ggaatcgtga attaatgttg
     3661 ttgcctggca agctgcgcta tcgcgaagtg tctgccagct ttaactacaa ctatatcggt
     3721 cgtttattac tgccggcagc ggtgaaaaaa ttcccgattg tggggctgaa cagcgccatg
     3781 ttactggtag ctgaagatgg cggatttaca cttgaaatta acggcagcga aaaagagctc
     3841 tatctgcttt ccgggcagca attccttaag tgtccactaa gtgttgtaaa gaaacgcgcc
     3901 agcattcgtt acagcggaga tgttacttgt agtgtggtga cttattcaca attaccggag
     3961 tcgattcagg ttcaggcaca gttgaaacag cctaaattac gtggaaacgt tcagacggcg
     4021 caaagggagg ttgcaccatg agaaatcgat tgattgcggc gatattgggc ttgtttggca
     4081 cgctcactgg cgttcaggca gctcctgacg tgaccagtga aattacgtat gatttggcat
     4141 ctggtagagc ggattattac ttctggaagg atgaagcgtc ggcaggaaat aatggatata
     4201 tgtggtatga atgttcgtat cctgacctcc aacaaacctg tacagctaat ggaaatatat
     4261 cgacagtaca aatctattta actgaacaac gcagtgggat gcgttggccg gtaaaactca
     4321 aaggatttaa aacagccatt gtaagtagcg atgaagcgcc gccaggatgc aaggggggca
     4381 aagggcttca gacgaatctt aaggattcta atagatcttc atgtacagaa gatggtcaac
     4441 attattatat atacgataca aagtttctta cgctctacct tgagcagaca gagatgaaga
     4501 atttgccgat tggtggcgtc tggaagggga aagttaaatt acattcgaac agcccggccc
     4561 aggactattt cgcaaatatt accctgaata cgctcgaccc caaccatatt gacgtgttct
     4621 tcccggagtt cgcccacgcc acgccaaggg tgcagttaga cttgcatcca acaggaagcg
     4681 ttaacggcag caactacgcg caagatctga ccatgttgga catgtgcctg tacgatggtt
     4741 ttaacggtaa tgccatcagt tatgaaatca tgctcaaaga tgaagggcga ccagctgcag
     4801 ggcgcagaga cggttacttc tctatctatc gtcagggagg gaccaccacc gacgagggag
     4861 aacgcattga ttaccgggtc aaaatgtaca acccggaaac cggtgggcaa attgatgtgc
     4921 gcaataatga aaatatggtc tggaacagca ttaacctgaa acgtgtgcgt ccggtggtac
     4981 tgcccggtat tcgctatgcc gtgatgtgtg tgccgacacc cttgactttg gcagtcgata
     5041 aattcagcgt gatggataaa caggccgggt actacatggg caaattgtca gtaatcttta
     5101 cgccttcctt gccaaccatc aattaaccct gcaaagcgga caaacgcttt tttctatata
     5161 aacgacgaag ccgtctgata aagcggcttc gtcattacaa cttaagttaa acgttaatgt
     5221 tgcggtgcgg gattgttatg tgtttcctgc gccacctcaa tcgccggttt gttctgcaac
     5281 acggtccaga taaccagcgc acctaacagg tcaaatactg ccagaactgc gaacagcggg
     5341 ctgaagccga tggtgtcagc cagtgcaccg acaaccagcg caaacagcgt acttgccagc
     5401 catgcggaca tcccggttaa accgttcgcc gtcgccactt cgttacgacc gaacacgtca
     5461 gaagagagcg taatcagcgc gccagacagt gcctggtggg caaaaccacc gatacacagc
     5521 agcataattg cgacatacgg gttggtgaac agaccgatca tacccgggcc aatcatcagc
     5581 acagcaccca gcgttacgac catcttacgg gaaacgatca ggttcacacc aaaccaacgc
     5641 tggaacagcg gcggcaggta accaccgagg atacaaccga ggtcagcaaa cagcatcggc
     5701 atccaggcga acatcgcgat ctctttcaga ttaaagccgt aaactttaaa catgaacagc
     5761 gggatccacg cgttaaaagt accccaggcc ggttctgcca ggaaacgcgg cagtgcgata
     5821 ccccagaact gacggttacg caggatctga ccaacggaca ttttcttcgc cgtgctcacc
     5881 tggtgctggg cttcctgacc attaataata tagtcgcgtt cttcatcggt cagatgcttc
     5941 tggtcgcgcg gatgtttata gaaaatcagc catgccatcg cccagataaa gctcaatgca
     6001 ccggagatga taaatgccat ctgccagctg tgcattacga ttgcccatac caccagcggc
     6061 ggcgcaatca tcgcaccaat cgaagaacct acgttaaagt aacctaccgc gatggaacgc
     6121 tctttcgccg ggaaccattc ggagctggct ttcagacccg ccgggatcat cgctgcttcc
     6181 gcggcaccga ctgcaccacg agcaatcgcc aggccacccc agctaccagc cagcgcggtt
     6241 gcaccacaga acacggccca cagcacagca aacattgcat aaccgatttt cgtacccagc
     6301 acatccagta catagcccgc taccggttgc atgaccgtat aagcagcaga ataggctgcg
     6361 atgatatagg aatactgttg ggtggagatg tttaactctt ccatcagagt tggcgcagct
     6421 gccgccacag tgttacgcgt caggtaacca agcacggtgc caagcgtcac cagtgcgatc
     6481 atataccaac gtaacccttt aattttacgc atgtaaaacc tcatcgtttt gttatatccg
     6541 caggaagcgc ggccatcatc ccgccagagg ctgaagatgt tagttacgac cgggtaaccg
     6601 aaaaaaaacc ggcacgcccc gaacgttgcc atgaaagttt cgtgctaatt cggcttccgt
     6661 accggttaac ccgattcatc taacaaatga atgaatcggc aatttgcatt ccgtcgactt
     6721 atgatttgcg acggcagaaa gataacttgt catacaactt taaaaggtga gagccatcac
     6781 aaatgtgcga atatttgtag ggacattacc tgacgacagc gaggccagta ctggcgcggc
     6841 ctgcagagag atttaccact ttgagagtaa tttttttaac tacgtttatt gatctaactc
     6901 acgaaaatat cttcggactc tggaaattgg tgtgataact ttgtcagcat cgcaccataa
     6961 gcaagctagc tcactcgttg agaggaagac gaaaatgact ccgtttatga ctgaagattt
     7021 cctgttagat accgaatttg cccgccgtct gtatcacgac tacgcaaaag accagccgat
     7081 tttcgattac cattgccatt tgccgccgca gcagattgcg gaagactatc gttttaaaaa
     7141 cctgtatgac atctggctga aaggcgatca ctacaaatgg cgcgctatgc gtaccaacgg
     7201 tgtggctgag cgtctgtgta ctggtgatgc gtctgaccgt gaaaaatttg acgcctgggc
     7261 ggcgactgtt ccgcacacta tcggcaaccc gttataccac tggacgcacc tcgaactgcg
     7321 tcgtccgttc ggtatcactg gcaaattgct ttctccgtca actgccgatg aaatctggaa
     7381 cgaatgtaac gaactgctgg cgcaggataa cttctccgcg cgcggcatca tgcagcagat
     7441 gaacgtgaaa atggtcggca ccaccgatga cccgatcgat tctctggagc atcacgcaga
     7501 gatcgccaaa gacggctctt tcaccatcaa agtgctgccg agctggcgtc cggacaaagc
     7561 ctttaacatt gaacaggcga cctttaacga ctacatggcg aagctgggcg aagtttccga
     7621 taccgacatt cgccgctttg ctgacctgca aactgccttg accaaacgtc tggatcactt
     7681 cgccgctcac ggctgtaaag tgtctgacca tgcgctggac gtggtgatgt ttgctgaagc
     7741 gaacgaagcg gaactggaca gcattctggc gcgccgtctg gctggcgaac ccctgagcga
     7801 gcacgaagtg gcacagttca aaactgcggt actggtgttc cttggtgccg aatatgcacg
     7861 tcgcggctgg gtacagcagt accacattgg cgcgctgcgt aataacaacc tgcgtcagtt
     7921 caaactgctg gggccggatg taggctttga ctccatcaac gaccgtccga tggcggaaga
     7981 gttgtctaag ctgctgagca agcagaacga agaaaacctg ctgccgaaaa ccattctcta
     8041 ctgcctgaac ccgcgcgata acgaagtgct gggcaccatg atcggtaact tccagggcga
     8101 aggtatgccg ggcaaaatgc agttcggttc cggctggtgg tttaacgatc agaaagacgg
     8161 tatggaacgt cagatcaccc aactggcgca gctcggtctg ctgagccgct ttgtcggtat
     8221 gctgactgac agccgtagct tcctgtcata cacccgtcac gaatacttcc gccgcattct
     8281 gtgccagatg atcggtcgct gggtggaagc gggcgaagca ccggcggaca tcaacctgct
     8341 gggcgagatg gtgaaaaata tttgctttaa caatgcgcgt gactacttcg ccattgaact
     8401 gaactaaggt ctggggttga tatgcaatac atcaagatcc atgcgctgga taacgtcgcg
     8461 gtcgctttag cagatttggc tgaaggcaca gaagtcagtg tcgataacca gactgttacg
     8521 ctgcgccagg atgttgctcg tggacataaa tttgcgttaa cggatatcgc aaaaggggcc
     8581 aacgtcatca aatatggcct gccgattggt tatgcattgg cggatattgc ggcgggggaa
     8641 cacgtccacg cccacaatac gcgcacgaat ctgagcgatc tggatcagta tcgctatcaa
     8701 cctgattttc aggatctgcc tgcgcaagcg gcagatcgtg aagtgcagat ctatcgtcgc
     8761 gctaacggcg atgtcggggt gcgtaatgag ctgtggatcc tgccaaccgt gggctgtgtc
     8821 aacggcatcg cgcggcaaat ccagaaccgt ttcctgaaag agaccaacaa cgccgaaggt
     8881 accgacggcg tgttcctctt cagccacacc tacggctgct cacaactggg cgacgatcac
     8941 atcaacaccc gcaccatgct gcaaaacatg gtgcgccacc cgaacgcggg cgcagtgctg
     9001 gtgattggtc tgggctgtga aaacaaccag gttgccgcat tccgtgaaac gttgggcgat
     9061 atcgatcctg aacgcgttca tttcatgatc tgccaacagc aggatgatga gatcgaagcc
     9121 gggatcgagc atttgcatca gctgtataac gtgatgcgca acgataaacg cgagccaggc
     9181 aaactcagcg aactgaagtt tggtctggag tgcggtggtt ctgacggtct ttctggtatt
     9241 actgctaacc cgatgctggg gcgtttctct gactacgtga ttgctaacgg cggtactacc
     9301 gtactgaccg aagtgccgga gatgtttggc gcagagcagt tgctgatgga ccattgccgc
     9361 gacgaagcaa cgtttgaaaa actggtgacc atggtcaacg acttcaaaca gtactttatt
     9421 gcccatgacc agccgatcta tgaaaaccca tcgccgggga acaaagcggg cggtatcacc
     9481 acgctggaag ataaatccct tggctgtacc cagaaagcgg gttccagcgt cgtggttgac
     9541 gtgctgcgtt acggcgagcg tctgaaaacg ccggggctga acttgttaag tgcgccgggt
     9601 aacgatgccg tagcgaccag cgccctggcg ggtgcgggct gccatatggt gctgttcagt
     9661 actggtcgtg gcacgccata cggcggcttt gtaccgacgg tgaaaatcgc taccaacagt
     9721 gaactggcgg cgaagaaaaa acactggatc gactttgacg cgggtcagct gatccacggt
     9781 aaagcgatgc cgcagttgct ggaagaattt atcgacacca tcgttgagtt tgccaacggt
     9841 aaacaaacct gcaacgagcg taacgacttc cgcgaactgg cgatcttcaa aagcggcgta
     9901 acgctataaa gtcgaaatga gttgttaata aaaaacggcg tttcataatg tgaagcgccg
     9961 tttgcttttc catacctgat aaggatttat catgaccgcg tattggctgg cccagggcgt
    10021 gggtgtcatc gcctttctga ttggtatcac aacatttttc aatcgtgacg aacgtcgctt
    10081 caaaaagcag ctttcggtct atagcgccgt tattggcgta catttttttc ttctgggcac
    10141 ctatcccgct ggtgccagtg ccatccttaa tgccattcgt acattgatta ccttacgcac
    10201 gcgcagctta tgggtaatgg cgatttttat tgtgctgact ggcggaattg gcctcgcgaa
    10261 gttccatcat cctgtcgaac tattgccggt tatcggtacg attgtcagta cctgggcgct
    10321 gttccgctgt aaagggctca ccatgcgctg cgtgatgtgg ttttcaacgt gttgctgggt
    10381 gattcacaac ttctgggcgg ggtcgatagg cggcacaatg attgagggta gttttctgct
    10441 tatgaatggc ttgaatatca ttcgtttctg gcggatgcag aaaaggggaa ttgatccgtt
    10501 taaagtagag aaaacccctc ccgccgtaga cgaaaggggt taaacaatta attacgcagg
    10561 gcgctatttg ccagacgatc gtcttccgcc tggcaagctg ccgcagtgaa cagcacgtca
    10621 gttgaagagt tcagcgcggt ttcgcaagag tcctgcaata cgccgatgat aaagccgacg
    10681 gcaaccacct gcatggcgat atcgttcgaa ataccgaaca tattacaggc cagcgggatc
    10741 agcagcagag aaccccccgc cacgccggat gcgccacagg cacacagaga agccactacg
    10801 ctcaacagca gcgctgtggg cagatcgacc ggaataccca gcgtattaac cgcagccagc
    10861 gtcaacacgg taatggtgat tgctgcgccc gccatattga tggtggctcc cagcggaata
    10921 gaaacggaat aggtatcgcg atccagattc agcttttcac acagcgccat attcaccgga
    10981 atgttcgctg cagagctgcg ggtgaagaag gcatacacac cgctttcgcg caggcacagc
    11041 agcaccagcg ggaacgggtt acgacgaatt ttccaccaca ccagcaatgg gttaaccacc
    11101 agcgccacca gtaacataca gccaaccagc acgaccagca gttgcgcgta gccccacagt
    11161 gtggagaaac cggtggttgc cagggtagaa gaaaccagac caaaaatacc aatcggtgcg
    11221 aagcgaatga ccagtttcac cataaaggtg acggcattcg acatatcgtt gaccaggttt
    11281 ttggtggtct cgttaccgtg acgcagtgcg aaaccgaggc caattgccca caccaggatc
    11341 ccgatgtagt tacctttcag cagcgcgtcg atggggttgg aaaccatgct cattaccagc
    11401 ccgcgcatca cttctacaat gcctgacggt ggcgaaatat cacccgcgct actggataag
    11461 tgcagggtag aagggaaggc gaagctgaaa acgactgcgg ccagagcagc agagaaggta
    11521 cccagcagat agaggaacaa aatagggcgg atattggttt tctgcccgtg ctggtggtta
    11581 gcaatagatg ccatcaccag catcaacacc aggatggggg caacggcttt cagtgcgccg
    11641 acgaacaaag tacctaacag accaacagct tccgccgcgg gttttgagat ccatgccaga
    11701 agaatcccca gaacaaggcc gaccaggatt tgttttacca ggctgccatg agccagacgc
    11761 cggaatagcc ccggtgaacg ttgcgtagtc atttttcgat cctttcattg tgttgtcgca
    11821 catccctggt gcgttctgtc gacgcatctt tcaggatgta acaaagtgtt tgcaaggtcg
    11881 agtataagga aagttacagc ttcgggaagc gaaaaatgct ggattttaaa gagaggtcat
    11941 attttgcaac ttaatggtta catttatttg acataaaaat aaagccaacg tgcggcttcc
    12001 agactgatga caacatcaaa aaaggactcg gtcagtcccc tcgccccgtt tggggagagg
    12061 gttagggtga ggggaacagg ccagcatcgg tgcgaaaaat taccctcacc ccgaccctct
    12121 ccctggaagg gagagggaga aaacggtgct catgttaatg acagggtaca cggcttaggc
    12181 agattaaaaa ttatccaccc cgctgcttat catgccgata attcacccag gcgttgataa
    12241 taaacgtcat caccagaatg ccaaacacca cgcccagcga gacggcgatt ggaatatggt
    12301 agaagtcgac aatcagcatc ttgataccga taaacaccag aatcaccgcc aggccatatt
    12361 tgagcatcga gaaacgctct gctacgcccg ccagcaggaa atacatcgca cgcaggccga
    12421 ggatcgcaaa caggtttgag gtcagcacaa tgaacgggtc agtggtcacg gcgaagatag
    12481 ccggaatgct atccacggcg aaaatcacgt cgctcaattc caccagaatc agtaccagca
    12541 tcagcggtgt ggcgtacagc aatccattct tacgcacaaa gaaatgctcg ttgtcgatgg
    12601 tgtcggtcat gcgcaaatga ccgcgtagcc agcgcaccag cggcttgtcg ccaatgcctg
    12661 attcatcttc atgggcgagc gccatcttca cgccggtaaa cagcaggaag gcaccgaaga
    12721 tatacaggat ccagtcgaac tgcgaaatta gccagctgcc agtgaagatc atgatggtac
    12781 gcagaacaat cgccccgagc acgccataca ccagcacgcg gcgttgtaat gccgccggaa
    12841 cagagaaata gctgaacaac atcagccaga caaagacgtt atcgaccgcc agcgatttct
    12901 caatcagata acctgtgaga aaggccagtg cctgtggatc ggcaacggcg cgaccttcgg
    12961 tttgcaccag ataccaccag aaagcggcgt taaacagtaa cgacagcgtc acccagacca
    13021 gcgaccaggc cgcagcctgt ttcatggtca tggcatgtgc cccacgacgc ccctgcaaca
    13081 acaggtcgat agccagcata atggcgacaa caacagcgaa tccgccccat agcaacggcg
    13141 tgccgacagt attcatagaa gttccttaca cataaaaaaa cggccaacgt cggaagacgt
    13201 cagccgctgc tttttatgca tagacctcgc cttccggcaa ggtctcactt acaacaaaaa
    13261 aggaatacgt ctgcgtattc ctttcgggtt gcccggtgac cggatgtggt ttttcacaca
    13321 tcgtaatgac gatcgaccgg caatgaagtt actccccttt gcaggtaaca aagtatgaca
    13381 gaccattcag ccagtcaatg gtctgttaca taccttttac actgttttac tttggcaatt
    13441 atagttttac gctatctgcc ggaaaaatca ccccagtctg gcggcggatc tcggtcagca
    13501 gtttggcggt gatgcgactg accgccagcc ccggatgatc caccagatgc tcatccacca
    13561 gggtagcgaa cagctctgct tcgtagagca tggtattaat atgctgcggc tgggtgagat
    13621 cctgcatttg gctgccacgc ggcacgaagc acactttctg gcattcagac agtttttcaa
    13681 tcaccagcga tcctgcttcg ccctgaatct cgctcgccag gacagaatca ctgacttttg
    13741 agtgctgcaa ggtgacgctg aaatcaccgt aatccatcac caccacgccg tgggcatcta
    13801 caccgcttgc cagcaaactg gcggttgcct gcacgctttt cggctcacca aataacgcca
    13861 ccgccgacgc caggcagtaa aagccgatat ccataattga accgttagag aatgacggat
    13921 taaaggtgtt gggattttca ccgtccaggt aacgttgata gcgcgaggaa tactggcaat
    13981 agttgaaaaa gactttacgc aatttgccga ctttcggcag cgcctggcgc agcaaatgaa
    14041 agttcggcag gcaggcggtt ttaaatgcct caaacagcac cacctgattt tcccgcgcac
    14101 aggcaatggc ggcatccact tccgccagat tcgacgccag tggtttctcg caaatcacat
    14161 gaattttatg gctaaggaaa agttgtgtct gggaaaagtg cagggcattc gggctggcaa
    14221 tatacaccgc gtcaatggca tcgctttccg ccatcgcttc cagcgaggta aacagatgct
    14281 cgacagaaaa atcattggcg aagtgctgag cctgctcaag gctgcgggaa tatacggcgg
    14341 ttaacttgta tttaccgctc tcatgggcgg cctcgacgaa ctggcgagtg atccagttcg
    14401 taccaatcac agcgaaacgt atcataacgc gtggatactc cataaaggga ttctgtcgtc
    14461 aatgtagcac gcctttttca tcttcgacgt gcgcagatac gcattattct tttgccggac
    14521 agccatgctc actaaacggc ccaatcatga ccgatggccc gagatatttc ggctggcgat
    14581 ggaggatttt ggcgtcaatc acggcgctga cacgagcgag tttctcccgc agttgagtat
    14641 aaaaaccgtg cttcatattg aggtcaggcg cgttaaaacc gatagcgtcg atgccgtact
    14701 gttttgccag ccagatggcg cgttgattat gaaattcttg cgagataatg gtgatatggt
    14761 tttcaccaaa aacctttttg gcacgcacta ccgaatccag cgttgagaat ccggcatagt
    14821 cgcagaagat cactttcgcc ggtacgcctt tagcgatcaa agcctgctgc atacctgagg
    14881 cttcatcgta atttttacgt ccgttatcgc cacttaccag tagccatttc acttttccgg
    14941 cgtggtacaa cgctgctgcg gtatcaatac gtcgggtaaa gtagcgatta cccggcctgg
    15001 cccccagcaa taagcccacg ttacgcgccg gaactgcgtt gacatcgctc caggtcagct
    15061 gcttgctggc gttgaccata acgcgatcgg caataaaaat ggtcgctcct gctataagca
    15121 acaacaaaca gccaatctta agagtccggc gagaaaaaca aatacggaga agaaggcggg
    15181 gctgcatggt cgttatcctt aacgaaaggg gggaggtcga ttttaggcgc taaagaaaga
    15241 aaagataacg cctgacatca ttttcagatt ttgtcctgcc caagcgacaa ctgcgttagc
    15301 cacagccggg tgtcgaactc aagctggtgg tactgcggct ccatatggca gcacaactgg
    15361 taaaacgctt tgttatgctc tttctccttc aggtgcgcca gttcgtgcac cacgatcata
    15421 cgtaaaaacg gttccggcgc gttgcgaaac acagtagcga cgcggatctc tgcttttgct
    15481 ttcagcttgc cgccctgcac acgagaaaca gcggtatgta acccgagcgc gttttttagc
    15541 acatggatct tattgtcata catcacttta ttgatcggcg gggcattacg cagaaactga
    15601 tttttcagat cctgagtata ttgccagagg gctttatcgg tggcgtagtc gtgtgttccc
    15661 ggatagcgtt ttgccagcac atcgcccaga cgctgttcgt taatcagcgt tcgcacctgg
    15721 gaaagtagct gctcgggata accctgaaga taagtaagat tgttcataac cgcccacgaa
    15781 aaagagaaaa agggtatact cacgcaccct tttcaggggc aacgtcgaaa ttttatcatt
    15841 caggagggcc gatgagccac ttagacaacg gtttccgttc actgacacta caacgttttc
    15901 cggcgacgga tgacgttaac ccgctacagg cgtgggaagc ggcggatgaa tatttgctgc
    15961 aacagttgga cgacacagaa atccgcggcc cggtgttgat cctgaatgat gcctttggtg
    16021 cgttaagctg cgcgctggcg gaacataagc cgtacagcat tggcgactca tacatcagtg
    16081 aactggcgac gcgcgagaat ttacgcctca acgggattga tgagtcgagc gtgaagtttc
    16141 tcgacagcac cgccgactac ccgcaacagc cgggtgtggt gctgatcaaa gtgccgaaaa
    16201 cactggcatt gctggaacag caactgcgtg cgctgcgcaa agtggtcacg tcggatacac
    16261 gtattattgc cggtgccaaa gcccgtgaca ttcacacttc cacgctggag ctgttcgaga
    16321 aagtgctcgg cccgaccacc actacgctgg catggaaaaa agcgcgcctg attaattgca
    16381 ctttcaatga accgccgctg gccgatgcgc cgcagaccgt tagctggaag ctggaaggta
    16441 ctgactggac tatccacaac catgcgaatg tcttctcccg caccgggctg gatattggcg
    16501 cacgcttctt tatgcaacat ctgccagaga atctcgaagg tgagattgtc gatctcggct
    16561 gtggtaacgg cgttattggc ctgacgctgc ttgataaaaa cccgcaggcg aaagtggtgt
    16621 ttgtcgatga atcgccgatg gcggtcgctt ccagccgaat gaatgttgaa accaacatgc
    16681 cagaggcgtt ggatcgctgc gagtttatga tcaacaacgc gctctccgga gtggagcctt
    16741 tccgctttaa tgctgtgctc tgcaacccgc cgtttcatca gcaacatgcg ctgaccgata
    16801 acgtcgcctg ggagatgttc caccacgccc gccgctgcct gaaaatcaac ggcgaactgt
    16861 atatcgttgc caaccgtcac ctggattact tccataaact gaagaagatt ttcggcaact
    16921 gcaccaccat cgccacgaat aataaatttg tggtgctgaa aacagtgaag ctggggcgtc
    16981 gtcggtaaga ttgggagtta cctgccggat gcggcgttaa cgccttatcc ggcctacgtt
    17041 cagcacgtta ctcccaggcc ggataagacg cggcaagcgt cgcatccggc aatgtctgcc
    17101 cagttctgga atcgcgcttc cataaaacaa aaaatccctg tcaccatcct ctacattctc
    17161 ttgtttagcg ttgttcaacg tttatgctac atacgtgaag ttatgacgca taaagaatac
    17221 gatttcttta ccgctgttca tcgtactaag gggaaaaatg attgcgattg ccgacatctt
    17281 gcaagcagga gaaaagctaa ctgcggtggc accttttctg gcgggtattc agaacgagga
    17341 acaatacacc caggcgctgg aactggtaga tcatctgctg ctcaacgatc ctgaaaaccc
    17401 cttgctggat ctggtgtgtg ccaaaataac cgcgtgggaa gaatcagcgc ccgaatttgc
    17461 ggaatttaat gccatggctc aagccatgcc tggcggtata gccgtgattc gtacccttat
    17521 ggatcaatat ggtttaaccc tttccgatct gccggaaatt ggcagtaaat ctatggtgtc
    17581 acgcgttttg agcgggaaga ggaaattaac gctggaacac gctaaaaaat tggcagcgcg
    17641 attcggtatt tctcccgcct tgtttattga ttaacgcgac gtgccggatg cgttgcatcc
    17701 ggcgcttcaa ataacgattt aaatctccag cgccagccgt gttccctggg caattgcccg
    17761 tcgtgcgtcc agctccatag ctacatcgca gccgccaatt aaatgcaccg ttttcccgct
    17821 atcaatcagc ggttgcgcca atgcgcggtt tggctcttgc cctgcgcaga tcaccatatt
    17881 gtccactgct aatacctgcg tttcgccgtt gatcaccaca tgcagcccgt catcgtcaat
    17941 cttctgataa cttacgcctg ggatcatttt cacaccccgc gagagcaggg tggtgcgatg
    18001 gatccagccg gtggttttgc ctaacccctg tcccggtttg ctggctttgc gctggagcat
    18061 cacaatttgc cgtgggctac gcgggatctg cattccctgc gggcttaagc caccagcctg
    18121 ttgtaggctg ctgtcgatcc cccactcatt acagaacccg gcgatattct ggctggtgga
    18181 ttcgcccggc tgacttaaat acatcgccgt atcaaaacca atcccgccac aaccgatgat
    18241 ggcaaccttg ttgcctaccg gcgctttgtc gcgcagtaca tcgagataac tcaatacctt
    18301 cggatgatcg atcccgtcga taggcggaac gcgcggcacg atcccactgg cgaggatcgt
    18361 ttcatcgaac gcctgtaact gatccgccgt cacggtgtga ttgagtttca gcgtcacgcc
    18421 cgtcacttcg atcatccggt ggtaatagcg cagcgtttcg taaaactcct ctttgccggg
    18481 gatctgtttg gcgatattaa actgcccgcc gatctcgctg tgggcatcaa acaatgttac
    18541 ctgatgccca cgcgccgccg cgttaatggc aaacgccagc ccagcaggtc ccgcaccgac
    18601 caccgccaga ttttttttct gcacggcagg aaggattggc attttggttt cgtggcaggc
    18661 gcgaggattc accaggcacg aggtgacttt gccaacgaag atctgatcga ggcaggcctg
    18721 attgcagcca atgcaggtgt tgatctcatc ggctcgcccc gattgcgctt ttgacagcag
    18781 ttccgcatca gcaagaaacg gtcgtgccat cgacaccata tcggcatcgc cgcgcgagag
    18841 aatgtcgtcg gcaacctgcg gatcgttaat ccggttggtg gtcaccagcg gcagcgaaac
    18901 gtggcctttc agtttgcgcg tgacccaagt aaatgcgccg cgcggcacgg gcgtggcaat
    18961 ggtcggaata cgtgcttcat gccagccaat gccggtgttg ataatggtcg cgcccgccgc
    19021 ttcaatggcc tgcgccagct ctaccgtttc ggcaaaagtc ccgccgtctt cgaccaggtc
    19081 gagcatcgac agtcggtaga taataatgaa gtcgttgccg acgcgttcgc gcaccgcacg
    19141 cactacttct acggcaaatc gcatccggtt gcggtaatcg ccgccccact ggtcactacg
    19201 ctgattggtg cgcagcgtca gaaattcgtt gatcaaatac ccttcggacc ccattacctc
    19261 tacaccgtcg tatcctgcct cccgtgccag ttgcgcgcag tgggcgaaat cgtcgatcag
    19321 ttgcaggatc tcttcatggg tgagttcgtg aggaacgaaa cggttgatgg gggcctgcaa
    19381 tgcggaggga gcgaccagat gcggttggta gctgtagcgc ccggtatgca aaatttgcag
    19441 ggctattttg ccgccttcct gatgtaccgc ttcggtaatg gtgcgatggt gtgggatctg
    19501 gctggcgtcg ttgagcattg cgccaccttc catgccaacg cctgttaaat ctggtgcaat
    19561 gccgccgctg acaatcagcg ccacgccgtg acgggcgcgt tcggcataaa acgctgccag
    19621 ccgctcggca ccgtccgggt attcctccag cccggtgtgc attgagccca tcaacacgcg
    19681 gttttttaac gtggtaaaac ctaaatccag cggggcgaac agcgacgggt agctcataaa
    19741 attgtccagt atgtaaaata attgttatgt ggtcggatga gttctaattt agccgtcgcc
    19801 ggagaaaagg gaaaagggga gtgcggggtt tgtgatggga ttcaaaaaga atacgcccgg
    19861 tggtaacgcc ggatgcgacg cttgccgcgt tttatccggc ctgggggatt gcacatgtag
    19921 ggcggataag gcgttcacgc cgcatccgcc agtggcacgg tgcagatgcc ggatgcgacg
    19981 cttgtcgcgt tttatccggc caggaggatt gcacatgtag ggcggataag gcgtttacgc
    20041 cgcatccgcc agcagttgca aattattgct tacggaaaaa atcgttatac aacatataca
    20101 aatgcgcggc actccaggag aaatttggtg cgccttgctg tgcgccagtc agcgggttgt
    20161 aattctcctg aattgggcca tcggcggtta atcctttggc gtgacggaag aacgtatccg
    20221 ccagtttcag ggcatcatcg cgataaccgt aacgctccat ccctttcaga ccaaaccaga
    20281 actgatccac ccatacgcgc ccacgccagt agatatcagc gccaaaagcc ggattggtta
    20341 acgccgccgt tcccagcggg acaaaggtgt tgaactcttt aggatcgagc atcaccttca
    20401 ccaccgcgtc ggcattggcc tgcgttgccg caccgttaaa cagcggcgac cagccttccg
    20461 gccctttacc gcgctcaaca atcggtttgc ccgcgcagcc gttcgccagt ggtttatctt
    20521 caatacgtac gtcatagtag aactgggtag tcgggtcgaa catacaggtg ttgatgtagt
    20581 ccgcgagctg ctgtgccaac tggcgatagc gtttggcctc ttctggctta ccgaggatgg
    20641 ttgccatctc cgccagataa tggttatcgc tgtacatata gctggcctga tccaccgact
    20701 cctgcaatag cgagtagccc agcaacgttc cgtcctgact gcggttttcg gcgaatttca
    20761 ccgtccagtc gctacgtttg ccgccattag cgacatattt atccaactgt tctttgtcga
    20821 taaaaccaaa gacggcggca tcatcacgcc ccgattccca cgacgcagcg acctgtgccg
    20881 gaatttccag actgtcgtac tggcctttct ccaccacgcg ggcgtagttg ttcagcccag
    20941 actgcgtctc ttctttgttg cctttcttca ccgtaaacag catctcgccg ctctcagtgt
    21001 tgtgggcttt gtcgcgggtc gcgccatatt ccggcacgcc gttgccgttg tgatcgcggt
    21061 tacgtaacca ccagtcgtga taggccacca gtttcgggta catctctgcc aaccaggctt
    21121 tatcctgggt gacgttgtac acttccatca ccgaccaggc ggcaaggctg ggtttggtat
    21181 tacgttcgtt ccagttgccg ccatcgccac cacgctcggg gctaaggttc cacgctatca
    21241 ggtcggggac aaagcccaca tcctgcggac gcacgctatc gccaggctgg atctgccagg
    21301 agaagaccgc gcggatattc tctttggcga tgtccggatt gaaatgcgcc atcgcaaacg
    21361 cctgcttcca ggtatcccac ggccaggtct gattgccgga gaaccagcgc ccggtcaccg
    21421 acggtgtaac ggtgttaaat ttcaccgcac cgcccggtga gcgccagtta ccgttgagcg
    21481 tttcgatcgc tttcaccgcg acgcgcgtct gttccggcgt cgcatccgga ttggttaacc
    21541 ctttcttcag gtattcttcc cagcgttgct gcgaggcggt gagataaaac gccggacgcg
    21601 ccagaatatc gcggatctgc atttgctctt tgctaacttc ctgagcggtc agcagatggg
    21661 aataggtggt gtagagcgtg gtcgaaccgt tgatatgcgc cttactggta aagcgattac
    21721 cgttgatttc agtctgcacc ggcagggatt tatgcacctg atattccgat tcgccggagg
    21781 tcagcagatc ccaggtggcg cgcactttgc caaaggtgac tttcaggcca tcacgggtgg
    21841 cgctgatttt gcgctgatag tcagggtatt cgccagcaat ggttttatcg gaaagcggtt
    21901 tcccttcttt cgcttccagt ttttccagca gttcgccgtc ccacaccaga tccagcggtt
    21961 tattgctggt gattttggtt tccagtagtg acgtgcgcgg cgtggcgaag cgcagagtca
    22021 tttcgacttg cacatctttt gctgtcagtt tttgcaccag cgcaccggga atactgtatg
    22081 cctccagcgt aaagtcgact ttcttgccgt cctgccagac ggtcaggcgg tcgaaattgc
    22141 tggccataaa gttgatgtac tcttccgtca gcagcgcaac gcccggaaag ccgcccatgg
    22201 tgttagggcc gtctggcaac agatgaccat gccaggctcc gagatcgaaa aacggattaa
    22261 aacgctggtg atcgtcgtaa tcgtaatcct tcatgtactg cggcgcgcca gtacggttaa
    22321 tcacgttttt ataattgtcg gcgttagcgg catgggcgga aaaacttatc agcagagcgc
    22381 aggttactgg cgttaaaata gtttttattt tcatgaaatt acagtcctta ttaccagtag
    22441 aaatattgca tcaggaagat ttggtcgctg ggatcgtgag aggcattttt catgtagaag
    22501 cggctatcaa aagccgtggc gaaacgtccg ccgccgtatt cgtaccagat accaaactgc
    22561 atgaaggagg tggtttcatc gtcagcgtgg tcagggcgat gtttggcgta ggtgtaagcg
    22621 gtggagagat aaacgccctt taacgcttca tacatggcgc tcaccatcat cccactttca
    22681 cttcccggta cgtccagccc gtcggcgcgt ccggtatggt gccaggcgcg agcggcaaag
    22741 ttaggagtta gcaggcccgt gagatagagc tgtcctgtgc cgtcggtgat ttccagaccg
    22801 ttcatccagg tgatgccttc ggcaaggtca tactggatgt aaccgttcat cattgccgga
    22861 taggtgtatt tgtcgtcata gcgatcgtac ttgccaaaat gtagccaggc tttgctttcg
    22921 tcatgatgtc cggcaggtgt ggcggtgacg ctataacgaa agttgccgct taagttctgc
    22981 accttcagcg cggtcataat gtcgcgggta ttgggaatga cgtagcccag atcgggggtg
    23041 aagtcgcccc accattgcag gtcatccagc gaggaatcct gacgcagact gagcatgatt
    23101 tcggtgccat cattggtacg ataaccgcca tagaaacggt taattccgcc ctcgaaacca
    23161 ccccagctat ggtctggcac ccaggcattg ccgtcgtggt cggcctgcac ggtccagcct
    23221 tcgccgtaaa tcaggccgaa ccaggagccg tacttcatct ccaggccacc ttcaatatag
    23281 gtaccgtcgc tgtatttatg tttattctca ccctctaaat ccatatatcc accaacccct
    23341 aattcgccgt aaaaacgaaa tgaaggagaa gatgtcgagg taattgcagg tgtttttgtg
    23401 tcgtcatgtt ctgccggacg tgcttcttct cctgccgcag aaaaggcgta gcaaaacggc
    23461 agagcaagta atgctctgca tggtgcagtg attaatttca ttgtgttaat ccatgagcta
    23521 aagaaaaagt acagcctttt atcgttgtaa ttataaaaat ataaaggcag aaactatttt
    23581 ccctctcctc atccaggaag agggaaaatg cctgctcatt ttttattatt ctgcttaatc
    23641 aacattgctg gctggcgtcg cttcaatatg gcgctcttca gccgttaatc cctttatata
    23701 tttactgtat ttccaccacg caaagccaag gaagataaca ataccgccga cgttataaaa
    23761 aatgatggtc agaatattcg cgccagtcgg gaatgtcgaa gcgacaaacc ctacggcaaa
    23821 tatcgcaatc agcattgaaa caacgataat accggtgcgg cgggagccca tacggaaatc
    23881 gcgtggcagg tgatctaatt tggcgcgtaa attcaggtaa gccagcatga tgaataacgg
    23941 cggaagcatg gacgctgcgg cggtcatatt aataatagta ttcatcagat cctgcacggt
    24001 attggaaccg agcatcggga taatcatcag cgggatgacg atcaggaact ggatccacgc
    24061 tgcgcgcgcc ggaacgccgt tttcgttcag ttcgacggtt ttcttaccaa agatgccttc
    24121 cgggatttcg gagaagaaaa ttttcaccgg cgttgcggtc cacatcagca gggaaccgaa
    24181 catcgcggta aaggacacca gaccgacaaa gcgattcatc aacgcttccg gtagaccaaa
    24241 atacgccgcc atgccgtgga atacctgcac cgatccgccg gtaaatttca actctttgct
    24301 gctgacgaag acgttaatca gcaccgagga gacggaatac agtacgccga taaaaatccc
    24361 ggcgaggatg atcactttaa cgaacgattt cgaaccgcct ttgacgtcgt taacgtacac
    24421 agcgacggac tccgcgccac ctgcggccat aaagatccag gtggtaacgc cgaggaacgc
    24481 ccagttgaag ttcgggatca tcgcgtcaac ggtgatgggg tcagcaggct gtacgccgcc
    24541 aaccagcgcc gtacctgcca gtaaaatgta ggagagcgtt aacagcagca tcagcgttga
    24601 agtgacggag gtaattggcc ccaacatttt cgccccgttg gtggaaaccc aggtggagaa
    24661 ggcgaacagc accatactga taatggtggt ggcaaccggc gtcataatat attcgtagcc
    24721 gaggaaggca tacgaagcat aagcaataac gcgcggcaac agtgaggtga aaaagaacag
    24781 gtttacgaac cagtaggtat aggcagtaat aaatgcccaa cgtccgccca gcgaactttt
    24841 tacccacgcg tagacaccgg cttctgagtt tttatttaac gaaacaaatt ctgcgatgat
    24901 cagacagaag ggaataaaat aaaaaatcgt cgcgaggaaa aacatcggtg ccgaggccag
    24961 tccaagctca atattattat tgataacgtt gttaaagctg taaacggcgg caaaagtcag
    25021 cgagagcaag ccgaatttgc cgattgtatt acgtttggta tcagacataa cacatctccg
    25081 aaaatgtgta gggtagcggt ggcggcaaac tccttttgcc gccgtagttg ttatttgtta
    25141 tggaaataac catcttcgat ggtgacttta agaaccactt ttttgaccgc gttattgcag
    25201 ataaaccgat acgcttcatg gatatcgcaa ataacgattt gcccttcgtg gacctcaacg
    25261 gtttctccgc agccttttaa atattcacgg tcagtttcat cacgataata ttccactacc
    25321 tgtaatgtct ctttcggtgc atattcaatt ttttgctgcc cttgcaggta gtaatgcact
    25381 tcaaaatagc gtcgatgccc ggtaaatagc gcatcggtcg cggagtctgt ctccacgcgg
    25441 taagtcaatg agtcaccgat ggagtgggcg acgccaggct gaatgttgtc gatattttca
    25501 atcgcttcaa cgcagcgttg ccacttcttg ccagaggcgt aaatctggcg gaactgttct
    25561 aagttatcga tgatcctcat tgcttattct cgctgtgcaa attcgtggaa aagaaccctg
    25621 cgccgaactc atacgacgcc aggttttgcg cggtagcttc tccgccagaa accggcagca
    25681 acgtaaagcc gtagctgaag tcacggaacc agacgcgcca ggagtccagc acctcgctgc
    25741 cccaggagtt ggagccgagg ccaagcagct ggtggtcgag gttcagggtg atgtcatcac
    25801 tgcgctgcag ctcgttacag tgctgggcag cgtggatgtt ttcctgggta tagcgccagg
    25861 cgctgaagtt aattgggcgc tgcggaacca ccagcagacc gttgccgtgg cggttagtca
    25921 gtgccgtcca gcggacatgc tgacggttgc cgttgttctg cgggaaggga tagttctcga
    25981 acatggcatc gacggtgctg cgccagatat cgatgatgtt agcctgctgg ctgtcggcgt
    26041 agttttcgcc cggtccacga ccgtaatacg ccacctgatc gtattcgccg ttaatcccca
    26101 tggtgaaacc gatgcacgga atgatgtgcg gatagtcgcc gtaacgctcg ccggaaagcg
    26161 ccacgttaac ctggccatcg gcagcgatgc gccagatgta ggtgcagtgc atcccgaagt
    26221 caaacaccgg cggggcaata actgtgcggc tgatgatcaa cacttcacca tcgctctgtt
    26281 ctacggcaaa gtcgcgcaga tgttcctgca tgatctgcaa atgattcggt tgccacagcc
    26341 cttcgtactc ctgcttgtgg ttgtcgatca ttggcttgaa gaagttgatc ttcggctcgc
    26401 gggtcagcag cgactcgcca ttcacctgcc aggatgtcgg tttgccactc atttttgaga
    26461 aggtgatcgc gaagttgtag ccgcgaacgg tgcagctcaa acgatcgtct tccagcgtca
    26521 gcggacgcgc attatttggt gcgaaaggca ctggttgcgc ggtgttttcc ttcagcggga
    26581 actgataagt ggcgatagaa tgcccggctt cgctgtagcg ggtgcgggaa tctttggtca
    26641 ccgtaatgtt gaggaacgct tcgcgggcgt ccagctgcgg cagcgtgatc tgcaaggggg
    26701 cttcgctgtt cggcgcaacg tcgcgcagtt taatctgctg cgtcgcgagc gtttcacctt
    26761 cgacgcgcac ctctgcgtgc agggtgtagt catcaagcgt ggtaaaccac agtttatttt
    26821 cgactttcag ctcgccgtga gtcagatcca gcgcgtggat ttttaccggc gcgataacct
    26881 gtttgtactc tttcaggccc ggtcccggcg tctgatcgga atagatcaaa ccatcaagac
    26941 agaagttata gttgttggga tagtcgccgt agtcgccgcc gaatttatac cagacgttgc
    27001 cgttgtcatc ctgcgcctgg atcccgtggt cgcaccattc ccagacataa tgtccctgaa
    27061 tgcaatcgtg cttatagaag acgttctggt actccgtcag cccgcctggt ccgttcccca
    27121 tcgcatgagc atattcacag atgatgcgcg gcttcggatg cgggtattca ccaaactcat
    27181 tcatcagcgg cacgcgggtg tacatggtgg aaataatatc gaccacttca gcatcgcgat
    27241 cttcttcgta atgcaccagt cgcgtgtcat ccagcgcctt cgctgcgtgg tacatcgcgc
    27301 ggatgttaca gccatagccg gattcattgc ccagcgacca gatgatgatc gacggatggt
    27361 ttttctgcgc gtgaatatgg cgaacaatgc gctcgacgta gactttttcc cactgcggat
    27421 cgtcggtaat acggctgata tcgccgacat tagcaaagcc gtgcgattcg acgtcggttt
    27481 ccgccatcac aaacaggccg tagatatcac acagttcgta aaaacgcgga tcgttcgggt
    27541 agtgagcggt acgcacggag ttgatattgt gctgcttcat caactggaga tctttctcga
    27601 cgcgatccat tccaacggcg cggcctttgc gatgatcgtt gtcgtgacgg ttgacgccgt
    27661 gcagcatcac ataacggtta ttgatccaga acagaccgtc gcgcactttg atatcacgga
    27721 agccaacgcg ttgtggcacc acttccagaa cgttgccgtt ggcgtctttc agcgtcatga
    27781 ccagatggta aagataaggg gattctgctg accattgctg cggctgttcg acagtaaaag
    27841 caaagctggc gctggtcagt ttttcaattg ccaaatgatc aatggcgctg ctgtgcacca
    27901 cgcgttcgcc atcaaacagg gtatattcca gcgtcgtgac gacaggggag gcggcgagat
    27961 tttccagcac cacttcgcag gaaagcgtgg catcgcaata ggcttcgtca aagtcggtac
    28021 gcacagtgaa atcgttaata tgcgttaggt gttttccgac cagataaaca tcgcggaaga
    28081 tccccgctga ccaccacata tcctggtctt ccacgtaggt agagtccgcc cactgcatca
    28141 cgcgcacaca caacaggttg tcgccggttt taaccatcgc gctgatgtca aactctgcgg
    28201 tcaggcgact gcccttgctg aaacccacat actgaccgtt aacatagact tcaaaatagg
    28261 tttcgacgcc gtcaaattta atcagcgtct gtttaccctg ccagccgtcg ctgagggtga
    28321 aaatacgttg ataggcaccg gttgggttat cgctggggac aaacggcaca tcgatgggga
    28381 acggaaaacc ttcgtcggta tattgcagtt tgccgtgacc ttccatttgc cacatggcgg
    28441 ggacggtaat atgcccccag tcagccatta actcagaggt gaaggcttct ggtacttgca
    28501 gcggatggtc aaaaaagtgg aaattccact gaccgcttaa gggcagaaac aggctgctgg
    28561 tttcgcgggc aaaggtacgc gcttgcgcaa cagaatcata tgaaaaaaag tacgcacgcg
    28621 gcgcaagtcg gttttcgtgg gtgagctgaa tgttttccca gcgattcata gggcctcccg
    28681 gtagagagaa atcggaacca ttcatggtga tggtagtttg tgtaattgct ggggagttta
    28741 gtaaaatttt tactaaaaag tagcaggtaa atgcatttac tttaactgga tcacgaaaat
    28801 aaacggcagc actgtccggc aaaaacgatt gccggacagt gtgtaagggg atttaacggg
    28861 tcgtgccgcg cagttttaat ttgctgggaa cgaagactaa cagcggcagc gcgcgaccat
    28921 cgcgggcttt ttcatacacc aggttaacgc cctgacttcc catcatctcg gaatggatgc
    28981 gcacggtgga gagcggcgga aaggtaaatc gcgcggtggg gatatcgtta acgctgataa
    29041 gcgaaatatc ctgtgggatg ttcaggcctc gttcatgaat tgcccgcagt acgccgatag
    29101 caatggaatc ggaagcaaca aacagtgcct tcggatagtc ttcccgcgcc agcatttgtt
    29161 ttgccagttc ataacccgac gaactggaaa aaccgccgcg ccagatatcc tcttcgcgta
    29221 ccacttgttt cagtcggcca tattccgcaa aggcgacctc acgaatatcc gccttgccag
    29281 gctcatcttc accgccaata aaaccaatac gattaacgcc ctggttgata tagaagtcga
    29341 tgatttcttt actgatgcgt gccagatcga tatccaccgc atcgtaaccg ctgccgggtt
    29401 cgtgaaagtc gataaaacag atattgtcgg tcaacgcaca ggcggcggcg cgcagggcgg
    29461 gcgtgggttt gccgacaatt aaaataccgg tgacgttttt aatgtctggt aatccgctgt
    29521 gttcataaca gttggtgagc tcaatgccca gcttttcgca ctgagtttca atgccgtggc
    29581 ggatcgccag atagtaagga tcgttgatct ccagctcctg ttggtagctg tagatagcca
    29641 gaatatggtg ttggttgact gcacctgtct ggagtttacg ggcactactg gtcttatact
    29701 ccagcttttc ggcgatctcg agaatgcgat gtttcgtctc ttctttcaca ttcaatgtcg
    29761 gatcgtcatt taagaccctg gatactgtcg ccagggatac gccagcttcg attgcgatgt
    29821 cttttagtgt tgccatgttt acctttttta ctttccctga tgtgcgcccc cattgtagag
    29881 gaagtgctta tcgggtcacc tgttttcagt aaataaagcg cgtttctttg acgctgtaac
    29941 ggtaacacag cggctcacga atgtgatcac gcctgcattc tccattttta gcctacagga
    30001 ttgagaaaaa cttttgctat attttagtaa aattttatcc gaagggagga aacaatggaa
    30061 accgtggctt acgctgattt tgcacgtctg gaaatgcgcg tcggaaagat tgtggaagtg
    30121 aaacgccatg aaaacgccga caagctgtac atcgtacagg ttgatgtggg ggaaaaaaca
    30181 ctgcaaaccg tgaccagcct ggtgccgtac tacagcgaag aagagctgat ggggaaaacg
    30241 gtggtggtct tatgcaatct gcaaaaagcg aaaatgcgtg gtgaaacgtc ggaatgcatg
    30301 ctgttgtgtg cggaaaccga tgacggcagt gaaagcgtgt tgttaacgcc ggagcggatg
    30361 atgcctgcgg gcgtacgcgt cgtataaaaa gatcggatgg cgacgtcgta tcgccatccg
    30421 atttgatatt acgcttcttc gacacttact cgcatggccg ccagcgcctt atgcgccgct
    30481 ttgatcacca gttcacactg ttcaatggtc agtgtcagtg gcggttcaat gcggatcgtt
    30541 ttggcgttat tgagcgttcc ggccaccagt acgcgctggc ggaacatctc gctggcaaag
    30601 ttatagccga tttcgttatc aacaaactca attgccatca acatcccttt accacgcgct
    30661 tcctgtacca gatcgggata ttcccgcgcc agttgacgga aaccgtccag caacatatcg
    30721 cctttttgct cagcctgagc cggtaagttc tgctccagca acacattgat ggtcgccagc
    30781 gccgccgcac aggccagcgg gttgccgcca aaggtggtgg tatgcaggaa tgggttgtcg
    30841 aacagaactg aaaacacctc ttcagtggcg atggtcgcgc caatcggcat cacgccgccg
    30901 ccgagcgctt tggcaaggca gaggatatcc ggctgtacgt tctcatgctc gcaggcgaac
    30961 atcttgcccg tgcgccccat gcccgtttgt acttcatcga ggatcatcag tgcgccgaac
    31021 tcatcgcata gcttacgtac ggcggtgaga tagcccggcg gcggcagaat tacgccacct
    31081 tcaccctgaa tcggttcgag gatcaccgca gccacatcat caccggtttt tttgcactcg
    31141 ttaagagccg tgcgcatggc ttcgatattg ccaaacggca catgacggaa gcccggcagt
    31201 aacggcataa acggtttgcg gaaggtcgat ttcgccgtgg ccgacagcgc gccaagtgat
    31261 ttaccgtgga acgcgccgct ggtggcaata aaagtaaact tgccgcgcgg tgactggtaa
    31321 gctttcgcca gcttcagcgc tgcttcaacg gactcggtgc cgctattaca gaagaagctg
    31381 tatttcagtt taccgggcgt tagcgcagca acggttttcg ccaacatcgc ccgtaacgga
    31441 tcgagcagct cctggctgtg cagcggttgt ttcgcaagtt gattctgtac ggcggaaacc
    31501 acaactggat tacggtgccc cacgttgaaa attccaaaac ctcccaggca gtcgataaac
    31561 tcctgtccct gggtgtcgac aagcgtattt aaacctcccg cttgccactc tacggctccg
    31621 taatccccgc cggcggtaac agatttgcga tactctaaaa accccggatt gacatgctct
    31681 ttgaagtatt caatcacctc tcggttaagt gctttcatct cctcatgatc cagcgttcgc
    31741 ttctcaatga gattcagggc gtgggcgctg cacgctaaag ccgatgcgct cgaaggtaac
    31801 ctgttcaaaa tatgctccgg aggctcgcgt atcacatgat accgatttaa gtattgcagg
    31861 gattgcgcca ctccggctgc gatcgcgaaa atcgggataa acacaaattc ggttatcatt
    31921 tgtgcaatat ttaatgctat ctgttaacat ttgttgttat tttgcacggt ttttgtcggg
    31981 tatggatttg atgattgctg cgcaaatgca cgttttcagg gcaataattg cctgattttt
    32041 gggcaagata attaacgttt tcgtatagta acagagtgaa agtattttaa atcaaagaat
    32101 tagatttgtg ctttaatcgc aaattgtgat ctaaatcaaa ttaatcggtt aaagataacc
    32161 gcagcggggc cgacataaac tctgacaaga agttaacaac catataacct gcacaggacg
    32221 cgaacatgtc ttctcatccg tatgtcaccc agcaaaatac cccgctggcg gacgatacca
    32281 ctctgatgtc cactaccgat ctgcaaagct atatcactca tgctaatgac acttttgtgc
    32341 aggtgagcgg ctttaccttg caagagttac aagggcagcc gcacaacatg gtgcgtcacc
    32401 cggatatgcc aaaagcggcg tttgcggata tgtggttcac cctgaaaaaa ggggagccct
    32461 ggagcggcat cgtgaaaaat cgccgcaaaa atggcgacca ttattgggtg cgggccaatg
    32521 cggtaccgat ggtgcgcgag ggaaaaatca gtggctatat gtcgattcgt acccgggcga
    32581 cggatgaaga gattgcggcg gtggagccgc tgtacaaagc gctgaacgcc ggacgtacca
    32641 gtaagcgtat tcataaaggc ctggtggtgc gtaaaggctg gctgggtaaa ctgccttcat
    32701 taccgcttcg ctggcgggcg cgtggagtga tgaccctgat gtttatcttg ctggcggcca
    32761 tgctttggtt tgttgctgcc ccggtggtga cgtatttcct ctgtgtgtta gtggtattgt
    32821 tggcaagcgc ttgttttgaa tggcagattg tgcgcccgat agaaaatgtc gcccgtcagg
    32881 cactgaaggt ggcgaccgga gagcgtaata gtgttgagca cctgaatcgc agcgatgagc
    32941 tggggctgac attacgcgcg gtagggcagc ttggcctgat gtgccgttgg ctaattaacg
    33001 atgtctcaag ccaggtgtcc agtgtcagaa atggcagtga gacgctggcg aaaggcaccg
    33061 atgaactgaa cgaacatacc cagcagacag ttgataacgt tcagcaaacg gtggcgacca
    33121 tgaaccaaat ggcggcgtcg gtgaaacaga actctgccac ggcgtcggct gccgataaac
    33181 tttctatcac cgccagtaat gcggcagtgc agggtgggga ggcgatgacc acggtgatca
    33241 agacaatgga cgatatcgcc gacagtaccc agcgcattgg caccattact tcgctgatta
    33301 acgatattgc gtttcagacc aatattctgg ccctgaatgc ggcggtggaa gcggcgcgtg
    33361 ccggcgaaca gggcaaaggt tttgcagtgg tggcagggga agtgcgtcat ttagccagcc
    33421 gcagcgctaa tgctgccaac gatattcgca agctgattga tgccagtgct gataaggtgc
    33481 aatccggttc gcagcaggta cacgccgccg gacggacgat ggaagatatt gtggcacagg
    33541 tgaaaaacgt cacccagttg atcgcccaga ttagccattc aacgctggaa caggccgatg
    33601 ggctttccag cctgacccgt gcagtggatg agcttaacct gatcacccag aaaaatgccg
    33661 agctggtgga agagagtgcg caggtgtcgg cgatggtgaa acaccgcgcc agccgactgg
    33721 aagacgcggt gacggtgctg cattaatcgg tatgccggat ccggcggttg gagcacaatg
    33781 cctgatgcga tgctggcgca tcttatcagg cctgcggggt gtgtagcggg tgtaggccgg
    33841 ataaggcgcg tcaagcgtcg catccggcaa ttgcaccgcg ccactggcgg atgcggcgat
    33901 taatccagtt gcgtaatatc aaaagcggcg cggtcgatca ccgcaatgat cttttttatt
    33961 tgtgcatcac tgatatcgct ctggttgacg cgtaaatcca gcaccgcttt aaaattatcc
    34021 agcgcccgct tcatttgcgg gttctggcgg agtgcagcac caacgcaacg cgctttgatg
    34081 cgttcttcaa tcatctccac ctgttcgcgg ttttcttcca gccactgcgc gccttgttcg
    34141 gtcagcgcaa tctgcttctt accaccttcc tcttcgcgga tggtaatcag cgactgctcc
    34201 tgcagaaaat ccagcgttgg gtagatgacg cccgggcttg gggtgtaatt cccctgggtt
    34261 aggttctcaa tcgctttaat caattcgtaa ccgtggctgt catcgcgcga gagaatatcc
    34321 agaatcacca gacgcaattc accgtgacca aagaaacgtt gccgacgacc gccgccgcga
    34381 ccgtggcgac caccgcagca ttgaccgtgt tcatgctggt gaccgtgtcc gcagtgctcg
    34441 tgttctgact tctcaccttt gcagcagccc tcatggcgtg gctggccttc atgtttacaa
    34501 cacccttcgt gatgatggct catatcagcc tccttttgct tgattagata tatctaattt
    34561 atatctgatg tgagcattac tgcaagtaca aaaatgattt ttaaacgtgg aagcacctca
    34621 catccaggcc ggataagacg ttcacgccgc atccggcagc attgctatgg cactgaatgc
    34681 cttcacatac ttcagatata tcagttctac aaatcgcttg catttatcat gattaacaat
    34741 cattatcatt tacgaaaatt atttagatat atctgattac tatcacgaag gcgataacaa
    34801 tgaataactc cccccgctac ccgcagcgcg ttcgcaatga tctgcgcttc cgtgaactga
    34861 ctgtgttacg cgttgagcgc atcagcgccg gttttcagcg cattgtcctc ggcggcgagg
    34921 cgctggacgg ttttacatcg cgcggctttg acgatcacag caaactcttc tttcctcaac
    34981 ctgacgctca ctttgtgccg ccaacggtaa cggaagaggg catcgtctgg ccggaaggac
    35041 cacgcccacc gtcgcgtgac tatacgccgc tgtatgacga actacgccat gaactggcga
    35101 tcgatttctt tattcacgac ggtggggtcg ccagcggctg ggcgatgcag gcgcaaccgg
    35161 gcgataaact tacggtggca ggtccgcgcg gttcgctggt ggtgccggaa gattacgcgt
    35221 atcagctgta tgtctgcgat gaatccggaa tgcccgcact gcgccgccgc ctggaaacgt
    35281 tgagcaaact tgccgttaaa ccgcaagtta gtgcgctggt tagcgtgcgg gataacgcct
    35341 gtcaggatta tctcgcgcac cttgatggtt ttaatatcga atggctggca catgatgagc
    35401 aggcggtaga tgcgcgtctg gcgcagatgc aaatccctgc cgatgattac ttcatctgga
    35461 taaccggcga aggtaaagtc gttaagaatt taagccgccg ctttgaagcg gaacagtatg
    35521 acccacagcg ggtacgtgca gcggcttact ggcacgcaaa gtaactgata tataaaaaga
    35581 aaaaggctga cgatttctcg tcagcctttg ctatatctgg tggcccctgc tggacttgaa
    35641 ccagcgacca agcgattatg agtcgcctgc tctaaccact gagctaaggg gccatggtag
    35701 cggattataa agtaactccg tgtcgcaatc cagccattac cgtgcgcctg ctgtttttat
    35761 aaacaatgta ttttcaatcc gttatacttt tcctggtgat gttagaaagg agtaaatatg
    35821 gttgaggata ttttggctcc agggttacgg gtcgtgtttt gcggtatcaa ccctgggctt
    35881 tcatccgccg ggactggttt tccctttgct catccagcaa atcgcttctg gaaggtgata
    35941 tatcaggccg ggtttaccga ccgtcagttg aagccgcagg aggcacagca tctgctggat
    36001 tatcgttgtg gcgtcaccaa actggtagac cgtccaacgg tgcaagccaa tgaagtttca
    36061 aagcaggagc tgcacgcagg tgggcgtaag ctgattgaaa aaattgaaga ttatcagccg
    36121 caggcgttgg cgattctggg caaacaagca tatgaacagg gattcagcca gcgcggtgca
    36181 cagtggggga aacaaacgct caccattggt tcgacgcaga tttgggtgct gccaaatccc
    36241 agcggtttaa gtcgcgtttc actagagaaa ctggttgaag catatcgcga gctggaccag
    36301 gcgctggtag tgcgtgggcg ataaaaacgc caccgaaaag gtggcgtttg tgcagaggga
    36361 ctagtgccgg gtgcggcgta acgcctgatc cggcctaccg attaatcgtc caggaagcta
    36421 cgcaacactt cagaacggct cgggtgacgc agtttgcgca gcgccttcgc ttcgatctga
    36481 cggatacgtt cgcgggtaac gtcgaactgt ttacccactt cttccagcgt gtggtcggtg
    36541 ttcatatcga taccgaaacg catacgcaga actttcgctt cacgcgcggt caggccagcc
    36601 agcacgtcgt gcgttgccgc acgcaggctt tcggtggtcg cagaatccag cggcagctcg
    36661 agggtggtat cctcgatgaa atcccccaga tgcgaatctt catcatcacc gatcggcgtt
    36721 tccatggaga ttggctcttt ggcgatcttc agcactttgc ggatcttgtc ttccggcatc
    36781 agcatacgtt cagccagttc ttccggcgtc ggttcacggc ccatctcttg cagcatctgg
    36841 cgagaaatac ggttgagttt gttgatagtc tcaatcatat gcaccggaat acggatggtg
    36901 cgcgcctgat ccgcgataga acgggtgatc gcctgacgga tccaccaggt tgcgtaggtg
    36961 gagaacttgt aaccacggcg gtattcgaat ttatcaaccg ctttcatcag accgatgttg
    37021 ccttcctgaa tcaggtcaag gaactgcaag ccacggttgg tgtatttctt ggcgatagaa
    37081 ataaccagac gtaagttcgc ttcaaccatc tctttcttcg cacggcgggc tttcgcttca
    37141 ccgatggaca tacgacggtt gatatcttta acctgctcga tggtcaggcc ggtttcttct
    37201 tcaatctgct gcagtttctg cagggcgcga tgcacttctt cagagacatc gtgcagtttt
    37261 tccgaccacg gcttgttcat cgcaattgcc gcgttgaacc aggtatcgct ggtttcgttg
    37321 ccggtaaaca gggtaatgaa gtttttcttc ggcattttgc actgctcaac gcagagcttc
    37381 atgatcagac gttcttgcgt acgaacgcgg tccatcatga cgcgcatgct gttgaccagg
    37441 tagtcaaact gcttcggcac caggcggaac tgtttgaata cttcagacag tttcaggatc
    37501 tcttcctgag cggcagcgtg actgcgacct ttcgctttga tggtgtcacg cgttacaacg
    37561 tactgagcgc gtagttccgc aaatttttcg cgagccagtt ccgggtcgat gctgttgtca
    37621 tcatcggcgc tgtcgtcatc gccatcttct tcgtcttcat cttcgtcatc gtccagatct
    37681 tcctgggaaa gctcagaacc gacgtgagtg gcggtaggtg ccagatcttc ttctgcgttc
    37741 gggtcaacaa agccggtgat cagatcggac agacgcgctt cttctgcttc aacacgatcg
    37801 tactgttcca gcagataggt gatcgcttcc ggatattcag caacggagca ttgaacctgg
    37861 ttgatcccgt cttcaatacg cttagcgatg tcaatttcgc cttcgcgggt caacagttca
    37921 acggtgccca tttcacgcat gtacatgcgt accgggtcag tcgtgcgccc gatttcagat
    37981 tccacgctgg aaagcacctg cgcggcggct tcggcagcat cttcgtccgc ggtgttttca
    38041 gccagcatca gatcatcggc atccggtgct tcttccatca cctgaatgcc catgtcgttg
    38101 atcatttgga tgatgtcttc gatctgatct gaatcgacga tatcttccgg cagatggtca
    38161 ttgacctcgg cataggtcag atagccttgc tccttaccac gggtgacaag aagtttcagc
    38221 tgtgactgcg ggttttgctc cataagacgg tatccacact tatttcatga ggttggtgtt
    38281 gggcgattga cccgatgtcc ttcagccgtt aacgctgaaa tccaacggtt gtttaccgcc
    38341 aacgataatt acgagggcgt acttatatat ttgccgctgc ctctcagtgc ggctgtcggg
    38401 ggcttcccga tcgctcttcg gcacttaagc cgttaaatca ctttttcgcc agctcctggt
    38461 ttaatgtcca gagctccagg cgttcttcgt tgcttaaacc atgcgtgcgc tcacgagcga
    38521 ttaactcttc ctggcgcagt tcaagcagcg aatcaaacat atggttgagt gagtcggtga
    38581 aggtttgctc agcaatattc ttatctgcta tatcgtccca catcgacagt ttttcaaggg
    38641 tggcagcatt atttgtacca cgatagtgct ctaaaagttg cccggtggtc agacctggct
    38701 gggagagaca agtgttgacc agttctctga ataagccaag tccagggagc ttattttcat
    38761 ccagattctc aagcggcggg accaacgtcg ctaattctgg attttgcacc agcaacccta
    38821 taagtatacg catggtcgtg cgttttagct gcggaacagg gcgagaaacg ccgctctctg
    38881 ccgcttttgg cattaatcgt tcaagctggc tgtcatcaag tatgcctaat ttgttgccta
    38941 attcctgacg aagatatatt cgcagcgttt cgcccggcac ttgcgatatc aatggcagtg
    39001 ccagcgtact caaacgtgcg cgcccgtcag gggtactcag atcaacttgc ggcatcaggc
    39061 tgttaaacag aaatgcggag agtggcatcg cctgctccat ccgcgcttca aacgcttctt
    39121 taccttcttt tcgtaccagc gtgtcagggt cttcgccatc aggcaaaaac ataaagcgta
    39181 gctgacggcc gtctgtcatg taaggcagcg ccgtttccag cgctcgccat gcggcatcgc
    39241 ggcctgcacg gtcgccgtca taacagcaaa tgacattgtt ggtcgcgcgg aacaacagtt
    39301 gtatgtgatc ggcggtggtt gacgtaccta acgacgcaac ggcgtaatta atgccgtatt
    39361 gcgccagcgc caccacgtcc atatagcctt cgaccacaag cagacgattg ggttcagcgt
    39421 tatcctgctg cgcttcataa agaccgtaaa gctggcggcc tttatggaaa atgtctgttt
    39481 ctggcgagtt caggtatttg ggggtatcgt tgcccagcac gcgcccgcca aaaccaatca
    39541 cccgaccgcg tttatcgcga atggggaaca tcacccgctc gcggaaacga tcgtaactgc
    39601 gtccctgatc gttagtgacc aacatccccg catcaatcaa tgactggcga ttttctggat
    39661 tgccgccaaa ccgcttcagg acgttgtccc agccgggggg cgcaaaacca atcgcaaagc
    39721 gagcgataac ctcgtggctt aatccgcgtt tttccagata ctggcgcgca gacgtggcaa
    39781 caggttgttg taaagattgt tggtaaaacg tattcagacc gtccatcaac tgataaagcg
    39841 tttgcctctg atggcgctcg atctggctgg ggccgctgcc tgcttcaaat ggcacttcaa
    39901 gattgtgcat tgctgccagc tcttcgaccg tttcaacgaa ctcgagcttg tcgtagttca
    39961 tcaggaagtc gatcgcgttg ccgtgcgcgc cacatccaaa gcagtggtaa aactgtttct
    40021 caccgttaac ggtgaatgac ggggttttct cgttgtggaa tggacaacac gcgtggaaat
    40081 tcttgccctg ctttttcagc ttcacacggg catcgatcag atcgacgatg tcagtgcgtg
    40141 ccagcagatc attaatgaat acgcgtggga ttcgtccagc cataggcccc gatttttagc
    40201 aattcataaa cgaaaataag ccgcgcattc ctttcggaag cacggcctta caactacaac
    40261 tcggtctgat cggagagcaa cgctctcggg gaattagtac agacgagtgc ggcgtgcgtt
    40321 ttcgcgagcc agtttcttcg cgtgacgttt cactgcagaa gctttagcgc gcttacgttc
    40381 ggtagtcggt ttttcataga actcacgacg acgaacttcc gccagaacac ctgctttttc
    40441 gcaggaacgc ttgaagcgac gcagagctac gtcgaacggc tcgttttcac gtactttaat
    40501 taccggcatg tgcctctcac ctttgattaa ttcggtttgc cgctggcatc aacgccagct
    40561 tatttcaaaa tggtgcggaa ttttactgca attgctgctg ctttgtaaag caccgcggcc
    40621 tttttgaaag ggacttttat aagggtgagg agtatacacg aggctttctc caggggcgaa
    40681 caaagtttta catcaacccg cattggtcct acactgcgcg gtaataaagc gaggtaaaac
    40741 aagtcatgcg tgtactgggt attgaaactt cctgcgatga aaccggcatc gccatttacg
    40801 acgatgaaaa aggtttgtta gccaaccaat tgtatagtca ggtgaaattg cacgctgact
    40861 acggcggcgt cgtgcctgaa ctggcctccc gcgatcacgt gcgcaaaacc gtaccgttga
    40921 tccaggcggc gctaaaggag tctggcttaa cggcaaaaga cattgatgct gtggcctata
    40981 ccgcaggccc tggattagtc ggcgcactgc tggttggcgc aaccgtgggg cgttctctgg
    41041 cgtttgcctg gaacgttccg gcaatcccgg tacaccatat ggaagggcat ctgttagcgc
    41101 cgatgctgga agataacccg ccggaatttc cgtttgtcgc gctgctggtg tccggcggtc
    41161 atacgcagtt aatcagcgtg actggcattg gtcagtacga gctgctcggc gagtctatcg
    41221 atgatgccgc cggtgaagcg tttgataaaa ccgcgaagct gctggggctg gattatcctg
    41281 gcggaccgtt actgtcgaaa atggcggctc agggtactgc cgggcgcttt gttttcccgc
    41341 gtccgatgac cgaccgtccg gggctggatt tcagcttctc cggtctgaaa accttcgcgg
    41401 caaataccat tcgtgacaac ggcaccgacg accagacgcg tgctgatatc gcccgcgcct
    41461 ttgaagatgc ggtggtcgat acgctgatga ttaagtgcaa gcgagcgttg gatcagactg
    41521 gctttaagcg actggtcatg gcaggcggcg tgagtgctaa ccgtacgtta cgggcgaagc
    41581 tggctgaaat gatgaaaaaa cgccgcggcg aagtgttcta cgcgcgtccg gagttttgta
    41641 ctgataacgg cgcgatgatc gcctatgccg gaatggtgcg gtttaaagca ggcgcgacgg
    41701 cggatctcgg cgttagcgtg cgtccgcgct ggccgctggc ggagttaccg gccgcgtaaa
    41761 actatcgggt gccggagagc aatttccggc accgtcctta cttaaagcaa caccacgggc
    41821 atccacagta agccggtaat caccagcaat acgaggaata tcagcccaaa aatcgccccc
    41881 agtcgccagt aatccgccgt tggcagataa ccactaccgt agtaaatcgg actgggtccg
    41941 gtggcgtatg gtgtaagaat gctccccaga ccaattgccg cgccaaccat caggcagaac
    42001 accggcagcg ggatttccgg catcgccagc gcagcggcaa tcatcatcgg tgcgagggcg
    42061 gaggtatacg ccgtggcgct ggcgaaaaag tagcgcagca gataaaacac cacaatcaac
    42121 gccaccatca ccatcgttgg cgaataaccg cttaagctgc ctgctaacag tttgccaaac
    42181 cagctaataa aaccggtgtt gttgagtccg gtagcgaggg tgataagcga ggccagccag
    42241 aagaaaacgt tccacgccgc tttattactg acaatgtcgt cccaactgat aatgcgcaga
    42301 agcagcatca gtgccaccac gctgtaaccg accatcgcgg catcgatata atcaccgccg
    42361 aaaatccaca gcaccagcgc gcctaccatc agccccagca tccgtttttc acgcgaacag
    42421 agcgggccca ttgcctgcag ttccgtctct gcccagcgcg gcacctgatc gccagacttc
    42481 agtaccggcg ggtacagcac ataagccagc cagggaacca gcagcaccag caaaatactg
    42541 agcggcaaca tcccgaggaa ccagtcgccc caactcagcg tggcgtgaga tgcgcttttc
    42601 atcagtccaa ttaacagcaa gtttggtgcc atcgccgtca agaaaatggc gctggtcacg
    42661 cagtcggcaa caatccccat ccacatgatg tacgagccaa tgctgcgcga actgctgtcg
    42721 tttggttgtg attgatagag cggtggcagg ttacggatga tgggatagat aatccccgca
    42781 ccacgcgccg agttggacgg tgttacaggt gcgaggatca gctcggagaa catcaccgca
    42841 tagccgagaa acagcgtgcg atgtcccatc tttttcacca gaatcagcgc aatgcggcgt
    42901 ccaagcccgg ttttttcata gcctgtgcca aacataaagg cggcgaaaat cagccagata
    42961 accgaattag aaaaaccgga aaccgcccac gagagggatt ttgcagtgaa tttaaagcct
    43021 ggctgggcga gctgttcggg gctgaacagc agccagggag agagtatggc gatgatggag
    43081 atacccacca tcgccaccac ggcacccggc acgggttcga ggatcagtcc aacgatcacg
    43141 ccagtaaaaa cggcaaagta gagccaggta tggttctcca gccctgcggg aaccggaagt
    43201 agagcaataa tggcgatgac cgccagcggc gcaagatatc gccaccattc agtggaaggt
    43261 ttcatcgtgt tatgcctgcg aaaaaggaga ggggtgagcc tctccgggag ggttatttga
    43321 tgtaatggac gtgctcgcag atctcttcca cgatgggatc gcggcgttcg gcgaacagct
    43381 ttttgttttc ggctatcagg ttgttgccgt gggtatcaat agagacaatc agcgggccga
    43441 actctttgac ccggcagacc cacagcgact ccggcattcc gagctctgtc cagtgcactt
    43501 cttcaatctc ttccacctgg gttgccgcca gcaccgcgca gcctgcaggg aaaatcacat
    43561 gtagcgcctt gaatttctga cagccttctt cggtcagcgg ccccattccg cctttgccga
    43621 ccaccatttt cacgccggtc tgctcaataa attcacgttc aaaactttcc atacgcatac
    43681 tggttgtcgg gccgacggag accatctccc atttgtcgcc gtttttgcgc acgatggggc
    43741 cagcgtggaa aatcgctttg ccgttgagat cgtaagggat cggacgtttc agttcgatca
    43801 aacggcggtg acaaacgtcg cggcaggtca ccagcgtacc ggtcaggtag atcacatcgc
    43861 cgacgcgaat atcttgcaga tcttcagctt tgatcggggt tgtcaggatc tttttcataa
    43921 cgcgctccgg gtgtgagaca gattttcaaa ggtgagatcg gcatgaacca gcagcgtgcc
    43981 gcgacgatgc gcccagcagc cggtagagac agcaacgccg atggttgacg gatggcgggc
    44041 ggcagattcg atatgcacgc ccatcactga actgttgccg gtcagccctt gtggaccaat
    44101 ccccagacgg ttgagtcctt cttccaggcg tagctccagc tctgccgctt ttggattggg
    44161 atggcggctg ccaatcggac gcaaaatggc tttacgcgag agtacggcgg cggtttccac
    44221 cgaggtggcg atgcccacgc ccaccagtac cggtggacag gcgtttacgg cgagggtgga
    44281 gatattttcg aagacgaatt tcaccacgcc ttcgtagcct tctgacggca ttaacacttt
    44341 cgagcggcca ggtagcgtgc agccgccgcc tgccatgtaa acttcgattt ccgcatcgtc
    44401 attgtcgggg atgatgtccc aggtgaccca cggtacgccg ctaccggtat ttttgccggt
    44461 gtttacttcg tcaaaaattt ctaccgcatt gtgacgtagt ggcgctttga cggttgcctc
    44521 ttccacggct tgtttgagta tgctttgcag ctcgccaagc agtgggaagc gggaaccgac
    44581 tttaacgaag aacataatct ccccggtgtc ctgacaggca ggacgattca ggtcaatcgc
    44641 tttttgcatg ttgtcgaaca tcgtatggta gataattttc cccatcgacg acgtttcggc
    44701 atcctttagc tgttttagtt tatccaccac gtcatcaggc attcgggtag aaatcatggc
    44761 ggtaaagtta gcgacaatct ctgtcaactt attcactgcc tgttgcttat tactttcgct
    44821 catcatggca actccagttt ttgtatttgt ctggaaaaat tcaccgccac aaactaccac
    44881 taaaaatgtg gttttatatt ttttgccacc gtgaatatgt aattaacagt tcgtgaatca
    44941 acgcgaaaat aagaatgaat attgcgccag agcagggaat ggcaatgttt tgcgaaatac
    45001 actgcgctta tcacaactgc ggataattaa cgatgctgaa tagctggcct ttagccaaag
    45061 acttgcaggt actggtagaa atcgtccaca gcgggagttt tagtgctgca gcggcgacgc
    45121 ttgggcaaac gcctgcattt gtcaccaagc ggatccaaat ccttgaaaat acgctggcaa
    45181 caacgctgct gaaccgctcc gctcgcggcg tggcgctgac tgaaagtggc caacgttgtt
    45241 acgaacatgc gctggaaatc ctcacccaat atcagcgact ggtcgatgac gtcacgcaaa
    45301 tcaaaacgcg cccggagggg atgattcgta ttggctgtag ttttggtttt gggcgcagcc
    45361 atattgcgcc agccattacc gaacttatgc gcaattatcc tgagttacag gtgcattttg
    45421 aattgttcga tcggcaaatt gatttagtgc aggataatat tgatctggat attcgtatta
    45481 atgacgaaat tcctgattat tatattgcgc atctgttaac gaaaaataaa agaatattat
    45541 gcgcagcacc tgagtatctg caaaaatatc cgcagccaca atcattacag gaattaagtc
    45601 gtcatgactg tctggtgacc aaagagcgcg atatgaccca cggaatatgg gagttgggga
    45661 acggtcagga gaaaaaatcg gtgaaggtta gcgggcatct ttcctccaat agcggcgaga
    45721 tagtgttgca atgggcgctg gagggcaaag ggattatgct gcgttccgag tgggatgtgt
    45781 tgccgtttct ggagagtggc aaactggtgc aagtattgcc ggagtatgca caaagcgcca
    45841 atatctgggc tgtttaccgg gagccgctct atcgcagcat gaaattacgt gtctgcgtgg
    45901 aatttctggc ggcatggtgc cagcaacggc tgggcaagcc cgatgaaggc tatcaggtca
    45961 tgtagatcca ccagaaatca ctcgggatcc ttttcgcgct ttcttttgaa tttcgtccag
    46021 atttttgtct cctgacgacg ccacagacgc tggatgttgt catgatgacg cagcaggatc
    46081 aggcaagaga gcatcgaaac cgggaaggtg aattgtggct taaaccacca tacataaaac
    46141 ggagcaatca gtgcactgac aatcgctccc agcgacgagt atccgctcaa tagcacggtc
    46201 agtaaccagg ttcccgccat tactccggtg agatcccagc caatgggtgc gatggcacca
    46261 aaagcggtag caacgccttt tcctccttta aatccgaaga aaacgggcca gatgtgtcca
    46321 agacaggcgg cgatggcaat taagcctagc cagaaggggc tgacacctaa ttcatacgcg
    46381 ccccagacgg gcaacattcc tttcagaacg tcgaaaatca gtactgctac ggctgctccc
    46441 ttgccaccga tacgtaacac attggttgcg cctggattgc cggagccgct ggttcgcgga
    46501 tcgggcagcc cacacaagcg gcaaaccaga atggcactgg aaatggagcc gcagaggtac
    46561 gcgatgagga tcattccagg cgcgattgca ctcataagct gttccgtttt gaaaattcgt
    46621 gttcaacgat gaatctgtgg ataatacgca catttcgccg gaagtggtat ccggttagcc
    46681 aaaaagcagg caggacgtga tggatattgt atttatagag caactttcgg taatcaccac
    46741 tattggtgtt tacgactggg aacagaccat cgaacagaag ttagtgttcg atatcgaaat
    46801 ggcatgggat aaccgtaaag cggcgaaaag tgatgatgtg gcggattgcc tcagttacgc
    46861 tgacattgca gaaacggtgg tcagccacgt cgagggggcg cgttttgcgc tggtggaacg
    46921 cgtggctgaa gaggtggcgg agctgctgtt agcacgcttc aactcgccgt gggtgcgtat
    46981 caaactcagc aagccaggcg cagtggcgcg ggcggcgaat gttggcgtaa tcattgagcg
    47041 tggcaataat ctgaaagaaa ataattaatt ttacagctgt taaaccaaac ggttataacc
    47101 tggtcatacg cagtagttcg gacaagcggt acattttaat aatttagggg tttattgatg
    47161 agcgatatgc actcgctgct gatagcggca atattgggtg tggtcgaagg attgacagaa
    47221 tttctgccgg tatccagcac gggccatatg attattgtcg gtcacttgtt ggggttcgag
    47281 ggcgacacgg cgaaaacctt tgaagttgtg atccagttag gatcaattct ggcggtagta
    47341 gtgatgttct ggcggcgtct gtttggcctg attggcatcc actttggccg cccgttgcag
    47401 cacgaaggag aaagcaaagg tcgtttaacg ctgatccaca ttttgctggg gatgattccg
    47461 gcggtggtac tggggctgtt gttccacgac acgattaagt cattgtttaa cccgataaat
    47521 gtgatgtatg cactggtcgt tggcggtttg ttgctgattg ccgccgaatg cctgaagccg
    47581 aaagagccgc gtgcgccggg tcttgatgat atgacctatc gtcaggcgtt tatgattggc
    47641 tgtttccagt gtctggcgct gtggcctggt ttctcccgtt ccggggccac catttcaggt
    47701 gggatgctga tgggcgtgag ccgttacgct gcttccgagt tctcgttcct gctggcggta
    47761 ccgatgatga tgggcgcaac ggcgctcgat ctctacaaaa gctggggctt cctgacaacc
    47821 ggcgatatcc cgatgtttgc cgttgggttt atcaccgctt ttgtggtggc gctgatagcg
    47881 attaaaacct tcctgcaatt gattaagcgc atttcgttta ttccgttcgc catttatcgc
    47941 tttattgtgg cggctgcggt gtacgtcgtg ttcttttgat tgagaaaagg ttcgggagca
    48001 ggcctggttt tctccctcgc tctgtaggga gagggccggg gtgggggtga ttgttcgcac
    48061 cggtgctggt ctgttcccct caccctaacc ctctccccga aggggcgagg ggatggttcg
    48121 tgttaacgtt tagttttata ctcagtcagg ctttgggcaa cgttgttcct tccaactggc
    48181 taccgccgca atccgccgtc gggtcagctc ctcgcgaatc tccacacctt taaatcccgc
    48241 ttcaacgacc gcttttgtcg gcactgactg cgccacttcc caggcttcgc gcaaccaacg
    48301 gccttgcggg tagtccgctg attcaaaacc ggttctgccg cgcacgtcag cctcgctggt
    48361 cagcgccagt tgctcgacac gctgcggttt acgccaggca tcgatggaat caaacaattt
    48421 gacgatagtt tttgggttca gcattgggaa ggtgtggatg agatcgtgaa actcagccac
    48481 cagtctggct aaatcgcgaa tttcatttgg cacgcgcaga cgctggcaga gttgttccac
    48541 taatttcaca cccgccggac cgtgaccatg atgacgcggc caaagttctg gcggcgtcag
    48601 tcctttaccg agatcgtggc ataaagttgc gaaacggaca tcgacctgcg gactcagcat
    48661 cgccgccatt gagagcgtca ttaaggtatg aatacccgtg tcgatttccg gatgccacct
    48721 ggcaggggcc ggaacgccaa acagtgcgtc aatttccggg aataaaacgc gcagtgcgcc
    48781 acaatcgcgc agtacctgga agaacacctg gggattgcgg gtggtgaggg cgctttccgt
    48841 ctctttccat acccgttcag gcgtcaggtg ttccagttca cccgcatggg tcatctcgcg
    48901 catcagcgtc agagtttcat cggcaatacg aaaaccgagg tgggcataac gcgcagcaaa
    48961 acgcgccacg cgcagaacgc gtaacggatc ttcgccaaaa gcgggggaaa catggcgcaa
    49021 cagacgattt tgcagatcgc ccagaccgtt gtacgggtcg ataatctcgc cgttatcgtc
    49081 ctgagccagc gcattaatgg tcagatcgcg acgcttaaga tcatcttcca gcgtgacatc
    49141 cggtgcggca tagcaagtaa aaccggtgta accggaaccg gatttccgtt cggtacgtgc
    49201 cagcgcatac tcttcatgcg tttgcggatg cagaaacaca ggaaaatcgc ggcctacctg
    49261 ctggtagccc gcgtcgagca tctcctgtgg cgtactgccg accaccaccc aatctctgtc
    49321 tttgaccggt agccctaaca atgcatcccg aacagcacca ccgaccagat aaatcttcac
    49381 gccatcatcc cttcgtcaaa tacacaattc ctaataataa gacagtgcaa cgaagaaggc
    49441 gatttagttc atccagcgat ctttgcgttt gcgcgttggg agcaggtgtg gcagtaccag
    49501 accgagcagc aagccaagcc ccagcacgcc accgccatac ataaaccatt gcatgatgat
    49561 ggtgcgctgt ttgtcatcca gctgtacgct ggcggcatcg acctttttct gcgcgacaat
    49621 cagctcgttt ttcaatttct gattttcttc ttttaatccg ttgatcacgc tgtcgctctg
    49681 cgccactttt tgctgcattt ctgcggtgcg ctgattccag gtgttatcga tattggtgag
    49741 tttatcggtc agggttttga cctgattttc cagatctggc acacgggagc gcaggcttgg
    49801 ctcagtgcta agttgtttca acgggatcca ggcggtacgg ccagagctgt ctttcacctg
    49861 ggcataattg gtgttggcgt cagtttgtaa taaggtcact tcctcgccgg cgttaaccgt
    49921 gcccacgagg cgataatgat ctcccggacc gctacggacc caggtattca gttcatcaga
    49981 aacatagcgc gtttcttcag cgtgtgagac ggcagtggcg ctaagtgcga gtaaagttaa
    50041 tccgatcagg cgtaattttg gcatcaggct gtcgttattg tcatggaaag tggaacgata
    50101 gtagtggcat cagtgtcgct acgcaaagca ttcgacatca atcggaatcc tctgtgtcag
    50161 gtcttgccac tgcttcaaac ttttacgccc gtcaaattgc ccgttgcatg gcaatttggc
    50221 gcaaaatact atctactgac aaaaaagatc gcattaagtt cgccgttcat cgtcacttat
    50281 gtgacataac cgataagtaa aggccatggc tcaggaaatc gaattaaagt ttattgttaa
    50341 tcacagtgcc gttgaggcgt tgcgtgacca tctcaatacg ctgggcggcg agcaccatga
    50401 ccccgtgcag ttgctgaata tttactacga aacgccggat aactggctgc gtgggcacga
    50461 tatgggctta cgtattcgtg gcgaaaacgg tcgctatgag atgaccatga aagttgcagg
    50521 aagagtgaca ggcggcttac accagcgccc ggaatataac gtggcgttga gcgaaccgac
    50581 gctcgacctg gcgcagttac cgacggaagt ctggccgaac ggcgaattgc ccgccgatct
    50641 cgcttcccgc gtacaaccgc tgttcagcac cgatttttat cgcgaaaaat ggctggtggc
    50701 ggtcgatgac agccgaattg aaatcgctct cgatcagggg gaggtgaaag cgggggaatt
    50761 tgctgaacct atctgtgagc tggaactgga actgcttagc ggcgacacgc gcgcggtgct
    50821 gaaactggcg aaccaactgg tatcgcaaac cggattacgc cagggcagcc tgagcaaagc
    50881 ggcgcgtggc tatcatctgg cgcagggcaa tccggcgcgt gaaatcaaac cgaccaccat
    50941 tttgcatgtt gcggcaaaag ccgatgtgga acaggggctg gaagcggcgc tcgagctggc
    51001 gttagcgcaa tggcagtatc atgaagaact gtgggtacgc ggcaacgatg cggcgaaaga
    51061 acaggtgctg gcagccattg gtctggtccg tcatacactg atgctgttcg gtggtattgt
    51121 gccgcgcaaa gcgagcactc acttacgtga tttgctgact caatgcgaag cgaccatcgc
    51181 ttctgcggtt tctgccgtga cggcggtcta ctctaccaaa acggcaatgg cgaagctggc
    51241 gttgaccgaa tggctggtaa gcaaagcctg gcagccgttt ttagatgcca aagcgcagag
    51301 taaaatgagc gattccttca aacgctttgc cgatatccat ctttcccgcc atgccgctga
    51361 actgaaaagc gttttctgcc agccgttggg cgatcgctac cgtgaccagt tgccacgtct
    51421 gacgcgtgat attgactcaa tactgttgct ggcgggttac tatgatcctg tcgtcgcgca
    51481 agcctggctg gagaactggc aggggctgcg tcacgctatt gcgaccgggc aacgcattga
    51541 aattgaacat ttccgtaatg aggcaaacaa tcaggaaccg ttctggttgc acagcggaaa
    51601 acgttaatca ggcaaggata aaatcgctta tgaagccgct ctcttcaccg ttacagcagt
    51661 actggcagac cgttgttgag cggctgccag agcctttagc cgagaaatca cttagcgcac
    51721 aggcgaagtc agtacttact ttcagtgatt ttgtgcagga cagcgtgatt gcgcatccag
    51781 agtggctgac ggaactggaa agccaatcgc cgcaggccga cgaatggcag cattacgcgg
    51841 catggttgca ggaggcgctc agcaatgtga gtgacgaagc cgggttaatg cgcgagctgc
    51901 ggctattccg gcggcgcatt atggtgcgca tcgcctgggc gcaaacgctg gctttggtta
    51961 ctgaagagag catattgcag cagctcagcc atctggcgga gacgctgatt gtcgccgcgc
    52021 gtgactggct gtatgacgct tgctgccgcg agtggggaac gccgtgcaat gcgcagggcg
    52081 aagcgcaacc gctgctgatt ttaggcatgg gtaagctggg cggtggggaa ctgaatttct
    52141 cctcagatat cgatctgatt tttgcctggc cggaacatgg ttgtacgcag ggcggacgcc
    52201 gggaactgga taacgcgcag ttttttaccc gcatggggca gcggctgatt aaagtgttgg
    52261 atcaaccaac gcaggatggc ttcgtctatc gcgtggatat gcggctgcgt ccgtttggcg
    52321 aaagtggccc gctggtgctg agctttgccg cgttggagga ttattaccag gagcaggggc
    52381 gcgactggga gcgttacgcg atggtcaagg cgcggattat gggcgatagc gaaggcgtct
    52441 atgctaacga gttgcgtgcg atgctgcgcc cgtttgtttt ccgtcgttac atcgatttca
    52501 gcgtgattca gtcgctgcgc aacatgaaag ggatgattgc ccgtgaagtg cgtcgacgtg
    52561 gtttgaccga caatatcaaa ctcggcgcag gcggcattcg cgaaattgaa tttatcgttc
    52621 aggtgttcca gctcattcgc ggtgggcgcg aaccgtcgct gcagtcgcgc tctttactgc
    52681 caacgctcag cgccattgcc gcgctgcatc tgctttctga aaacgatgct gaacaattgc
    52741 gagtggcata tctgttcctg cggcgtctgg aaaacctgct gcaaagcatt aacgacgaac
    52801 aaacccaaac gcttccttct gatgagctta accgtgcgcg gctggcgtgg gcgatggact
    52861 ttgctgactg gccgcaactg accggggcgc tgaccgcaca tatgaccaat gtgcgccggg
    52921 tgtttaatga attgattggc gacgacgaaa gtgaaactca ggaagagtcg ctgtcggaac
    52981 agtggcgtga gctgtggcag gatgcgttgc aggaagatga cactacgcca gtgctggcgc
    53041 atcttagcga ggatgatcgc aaacaggtcc taacgctgat tgctgatttc cgcaaagagc
    53101 tggataagcg tactatcggg ccgcgaggac gtcaggtgct cgaccatctg atgccacatc
    53161 tgctaagtga tgtctgtgcg cgtgaagacg ctgccgttac gctgtcgcgc attaccgcct
    53221 tgctggtggg gattgttacc cgcaccacct atttagaatt gctcagtgaa ttccgtgcgg
    53281 cgcttaaaca tttgatttct ctgtgtgccg catcgccgat gattgccagc cagctggcgc
    53341 gttatccatt attgctggat gaattgctcg atccaaacac tctttaccag ccgacggcga
    53401 ccgatgccta ccgcgatgag ttgcgccagt atttgctgcg cgtgccggaa gatgacgaag
    53461 agcaacagct tgaggcgctg cgtcagttca aacaggcgca gctgttacgc atcgccgcag
    53521 cggatatcgc tggtacgcta ccggtgatga aagtgagcga tcacttaacc tggctggcag
    53581 aggctatgat agatgccgtc gttcagcagg cgtgggttca aatggtggcc cgctacggta
    53641 agccaaatca cctcaacgat cgcgaaggcc gtggttttgc ggtggtcggc tacggcaagc
    53701 tgggcggctg ggagttaggc tacagttccg atcttgacct gatcttcctc catgattgcc
    53761 caatggatgc gatgactgac ggcgagcggg aaatcgacgg gcgacagttt tatctgcgtc
    53821 tggcgcaacg cattatgcat ctgttcagta cgcgaacctc ttccggcatt ttgtatgaag
    53881 tggatgcacg actgcgtccg tccggggcgg cgggaatgct ggtgacatcc gcagaagcat
    53941 ttgctgatta tcagaaaaac gaggcctgga cgtgggagca tcaggcgctg gtgcgtgcgc
    54001 gtgtagtgta cggcgatccg cagctcaccg cgcactttga cgcagtgcgt cgcgagatta
    54061 tgacgctgcc gcgtgaaggt aaaactctgc aaacggaagt gcgggaaatg cgcgagaaaa
    54121 tgcgcgctca tctcggcaat aaacatcgta atcgctttga tatcaaagcc gatgaaggcg
    54181 gaattaccga tatcgaattt attacccaat atctggtgtt gcgctacgct catgaaaaac
    54241 cgaagttaac gcgctggtca gacaacgtgc gtattctgga gctgctggcg caaaacgaca
    54301 ttatggaaga gcaggaagcg atggcgctga cccgtgctta cacgacgctg cgcgatgaac
    54361 ttcatcatct ggcattacag gaattgccgg gccatgtgcc ggaggattgc ttcaccgcag
    54421 agcgtgaact ggtgcgggca agctggcaga agtggctggt ggaagaatga agtatggtat
    54481 tatcgcgcgc aaattttgaa tctctcagga gacaggaatg aaagtaacgc tgccagagtt
    54541 tgaacgtgca ggagtgatgg tggttggtga tgtgatgctg gatcgttact ggtacggtcc
    54601 caccagccgt atctcgccgg aagcgccggt gcccgtggtt aaagtcaata ccatcgaaga
    54661 acgtccgggc ggcgcggcta acgtggcaat gaacatcgct tctctcggtg ccaatgctcg
    54721 cctggtcggg ctgacgggca ttgacgatgc ggcgcgtgcg ctgagtaaat ctctggccga
    54781 cgtcaacgtc aaatgcgact tcgtttctgt accgacgcat ccgactatca ccaaattacg
    54841 ggtactttcc cgcaaccaac agctgatccg cctggatttt gaagaaggtt tcgaaggtgt
    54901 tgatccgcag ccgctgcacg agcggattaa tcaggcgctg agttcgattg gcgcgctggt
    54961 gctttctgac tacgccaaag gtgcgctggc aagcgtacag cagatgatcc aactggcgcg
    55021 taaagcgggc gttccggtgc tgattgatcc aaaaggtacc gattttgagc gctaccgcgg
    55081 cgctacgctg ctgacaccga atctctcgga atttgaagct gttgtcggta aatgtaagac
    55141 cgaagaagag attgttgagc gcggcatgaa actgattgcc gattacgaac tctcggctct
    55201 gttagtgacc cgttccgaac agggtatgtc gctgctgcaa ccgggtaaag cgccgctgca
    55261 tatgccaacc caggcgcagg aagtgtatga cgttaccggt gcgggcgaca cggtgattgg
    55321 cgtcctggcg gcaacgctgg cagcgggtaa ttcgctggaa gaagcctgct tctttgccaa
    55381 tgcggcggct ggcgtggtgg tcggcaaact gggaacctcc acggtttcgc cgatcgagct
    55441 ggaaaatgca gtgcgtgggc gcgcagatac cggctttggt gtgatgaccg aagaggaact
    55501 gaagcttgct gtagcggcag cgcgtaaacg cggcgaaaag gtggtaatga ccaacggtgt
    55561 ctttgacatc ctgcacgccg ggcacgtctc ctatctggca aatgctcgca aactgggtga
    55621 ccgtctgatt gtcgctgtga acagcgatgc ctccaccaaa cggctgaaag gggattcccg
    55681 ccccgttaac ccgctcgaac agcgtatgat tgtgctgggc gcactggaag cggtcgactg
    55741 ggtggtgtcg tttgaagaag acacgccgca gcgcttgatc gccgggatcc tgccagattt
    55801 actggtgaag ggcggcgact ataaaccaga agagatcgcc gggagtaaag aagtctgggc
    55861 caacggcggc gaagtgctgg tgctcaactt cgaagacggt tgctcgacca ctaacatcat
    55921 caagaagatc caacaggata aaaaaggcta accggaaagc ggttcacaga tctcgcttcg
    55981 tagcaggcag gcctattgac gctgttgttt tttcaaccta aagtaaagga acaagggtaa
    56041 gggaggattt ctcccccctc tgatcagttg ttagtaagtc gggaaactta acagtaacaa
    56101 cacaaccagt atgatgacga acttcatcat aaccctttcc ttctataagg ccccttcctc
    56161 gggaggggct ttcccgtttc agccccttgc tgactccccg attgttgatg agcgccggac
    56221 cccgcgcaac gctttccctg aagcagtttt gccttccccg agcggtcacg caaaacgctg
    56281 caacgtcctg agcatttgca ccttttagcg gaacgcagat ataaaaaatc cccggctttt
    56341 tgggccaggg atatgtgtta atgaaacctt cttgacgctg attttttttc aacctaaagt
    56401 aaaggaacaa gggtgaggga ggatttctcc cccctctgat tggctgttaa taagctgcga
    56461 aacttacgat taacaacaca atcagtatga tgacgagctt catcataacc ctttccttct
    56521 gtaaggcccc ttcctcggga ggggctttcc cgtttcagcc ctttgctgac tccccgattg
    56581 ttgatgagcg ccggacctcg cgcaacgctt tcccagaggc agttttgcct tccccgagcg
    56641 gtcacgcaaa acgttgcaac gacctgatca tttgcagttt ttagcggaac gcagatataa
    56701 aaaatccccg gctttttgtg ccagggacgt tcatagctga aaatttattc tacgttttcg
    56761 gcgacgggag ttgttgaggt taagggtgaa gtcaatgccg ccagtgagcc gcctgaaacg
    56821 ccaatttcat tgagcaagga gtcaatcagc ggtgcctgtg tgcggtaaga gagagcggct
    56881 gataatgctt gttccgccag gtttccgccc cccacattac ccgtgtttgc atcacccgca
    56941 gcgctgccac gattcagacc atcgacctga ataatcttga taccgtcaat agatttcatc
    57001 ggctcaacgg atttttctat taccgcaggt agcgcctgca acaaggccag tttgaattta
    57061 aggctggttt gttcatcaga aagtacgctg atagcatcgt tcagcgcacg ttgtgcttct
    57121 gcttccgcca gacccttttt acgtgtagct tcggctaact caacgatagc cgccgcctgc
    57181 atctctgcgg cttctttttc tgctttcgcc cgcacggtca gttcaaccgc tttggtttct
    57241 gcatcctgcg cggcagcgat tagggcaact tgtttagcac gatcggcttc tgcggtctgg
    57301 cgagtggttt ctacgttttg ttgcgcactt actgcttctg cgagtgcaag gttagcacgc
    57361 gcttctgcct gggactgttg ttccgatttg gcggcaatag cgatcgattt cgtctggttg
    57421 gcgatttcgg tgacctgctg ttgttcgatc tctttaatac gaacttcacg ttcagcctca
    57481 acctttcttg agcggacggc ctgctcgcgc tcgatctccg tttcctgaat ttgtcgttca
    57541 gccagaattc gcgtctgctc tgcttcacga cgacgttcag cttcaaaagc cgcaatacgt
    57601 gcattctgtt cggcagtacg ggttttaacc tgctgctcct gctcaagcgt cataaacgct
    57661 tcttgttgtt caatctccaa cttgcgcgaa agtgcatcac ggtttttctc acgcaccgca
    57721 acttctacat cctgttcaac ttcgttacgt tcgcgacgac ggcgctccgt ctcctgagtc
    57781 agtttggtta aaccttcggc gtcaaaggca ttgttcggat tgaaatgttc tttcgaggtc
    57841 tggttaaagt tggtaagtga aacgctttcc agctcaagac cgtttttcga caggtcttct
    57901 gcgacagtat tttgtactcc ctgcacgaag ttctcgcggg tatcctgtaa ctcatgcatg
    57961 gtcatttgtg cagctgttgc acggagggca tcgacaaatt tatcttcaac caacatacgt
    58021 aagtcttctg gtgatagcgt gcgttgcccc aacgtctgcg ccgcagtggc gatgccttct
    58081 acagacggtt ttacccgtac aaagaaagcg actactacat cgacacgcat acgatctttc
    58141 gtaatcaggc tatcaatggt tgagcggctg acttccagct tcagagtatt catattgatg
    58201 gggattattt catgaaagat cggcatcacg attgcgccac cgctcatcac cactttttgc
    58261 ccacctaaac cagtacgaac aaaagcttgc tctgccgaag cgcgacgata gagcctggcg
    58321 aaaataattc caataataaa cagaatgcat acggcaataa tcgcggtaaa catccaggag
    58381 ggcacagaat taacaatatc atccattatt aaatttcctt ttgattaata aattacaata
    58441 tttgtggcca gggattgttt tccgccaaat atcgcgttgc agaaagtcgg caaataatta
    58501 atactttgtc tcctttagtg aaaaattttc cttcttcagg ctccagtagt aaataatgta
    58561 tttggccaaa ttgatcggtg agttttcctt cgcagggatt acctgaagtg gcttgatgac
    58621 cggtaattaa tgccatgcta ccaatatatt cttcttctgt aatagctgaa ctatggtcgc
    58681 gtggaatcca gggcgcaact attttaccgg tataatgcac cgcaataatc gtaaacagta
    58741 aactgacagg aaccacgaac aggttcgaca gtggtgattg ccagaccatg atgcaggcat
    58801 gctgcaacag gatgccaata agaccaaaaa aaccagccag caagcagaga acgacgagag
    58861 ctggcaatct tccgatattg agataatgaa gtgcctggct aatatgacct gtggttatgg
    58921 aatcataatg gtcaagatgt gcatcaagag caccggagag catgtgaccg cagataagcg
    58981 ctaaaatttc taaaaggccg atcaacagta caaaggaaat agcgaaaaga taaggggtat
    59041 tatagtcggc gaataaaatc atatgtcact ccaatgtcca tttagtgacg caatatttac
    59101 tttgggatag tttccttgct tacatt
//
LOCUS       DAPGWB010000011        58025 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.011, whole genome shotgun sequence.
ACCESSION   DAPGWB010000011 DAPGWB010000000
VERSION     DAPGWB010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 58025)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 58025)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..58025
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.011"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            100..2634
                     /gene="mrcB"
                     /locus_tag="RHX79_000676"
     CDS             100..2634
                     /gene="mrcB"
                     /locus_tag="RHX79_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glycosyl
                     transferase/transpeptidase"
                     /protein_id="HDV2195882.1"
                     /translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE
                     PMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQL
                     PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD
                     FPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR
                     SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL
                     FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY
                     FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD
                     MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA
                     EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI
                     GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLV
                     DALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA
                     FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT
                     GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAM
                     SIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRVLPVWTSDPQSLCQQSE
                     MQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDMFGSN"
     gene            2854..5097
                     /gene="fhuA"
                     /locus_tag="RHX79_000677"
     CDS             2854..5097
                     /gene="fhuA"
                     /locus_tag="RHX79_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrichrome porin FhuA"
                     /protein_id="HDV2195883.1"
                     /translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV
                     TAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEA
                     LSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLE
                     RAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLD
                     DDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGY
                     YGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLR
                     FAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDT
                     QLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNAKDP
                     ANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQ
                     FTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRP
                     IVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYT
                     DAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANS
                     FKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVV
                     ATATFRF"
     gene            5148..5945
                     /gene="fhuC"
                     /locus_tag="RHX79_000678"
     CDS             5148..5945
                     /gene="fhuC"
                     /locus_tag="RHX79_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe3+-hydroxamate ABC transporter ATP-binding
                     protein FhuC"
                     /protein_id="HDV2195884.1"
                     /translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG
                     HNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTV
                     RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM
                     LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGMTVIAVLHDINMAARYCDYL
                     VALRGGEMIAQGTPAEIMRGETLEMIYGIPMGILPHPAGAAPVSFVY"
     gene            5945..6835
                     /gene="fhuD"
                     /locus_tag="RHX79_000679"
     CDS             5945..6835
                     /gene="fhuD"
                     /locus_tag="RHX79_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706100.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter
                     substrate-binding protein FhuD"
                     /protein_id="HDV2195885.1"
                     /translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWL
                     PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW
                     SAGYGPSSEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYED
                     FILSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG
                     STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRTGRFQRVPAVWFYG
                     ATLSAMHFVRVLDNAIGGKA"
     gene            6832..8814
                     /gene="fhuB"
                     /locus_tag="RHX79_000680"
     CDS             6832..8814
                     /gene="fhuB"
                     /locus_tag="RHX79_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter permease
                     FhuB"
                     /protein_id="HDV2195886.1"
                     /translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP
                     YIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG
                     ITVTTLWAIPGAMASQFAALVGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI
                     NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD
                     DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR
                     LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM
                     KVNDRVAAERQHVLAFALAGGVLLIIAVVVALSFGRDAHGWTWASGALLDDLMPWRWP
                     RIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL
                     LPAGSLGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV
                     LTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRWLTILPLGGDTARAVGMALTPTR
                     IALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA
                     DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR"
     gene            complement(8849..10129)
                     /gene="hemL"
                     /locus_tag="RHX79_000681"
     CDS             complement(8849..10129)
                     /gene="hemL"
                     /locus_tag="RHX79_000681"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDV2195887.1"
                     /translation="MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYL
                     YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL
                     VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL
                     GQPNSPGVPADFAKHTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPE
                     FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVEPDLTCLGKIIGGGMPVGAF
                     GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTSRLAEG
                     LLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY
                     LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL"
     gene            10354..11775
                     /gene="clcA"
                     /locus_tag="RHX79_000682"
     CDS             10354..11775
                     /gene="clcA"
                     /locus_tag="RHX79_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H(+)/Cl(-) exchange transporter ClcA"
                     /protein_id="HDV2195888.1"
                     /translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT
                     LVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP
                     EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR
                     MVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV
                     FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGM
                     QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV
                     FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIA
                     GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILA
                     RTLAKQEAEQLARSKAASASENT"
     gene            11799..11864
                     /locus_tag="RHX79_000683"
     CDS             11799..11864
                     /locus_tag="RHX79_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195889.1"
                     /translation="MAIIIGLEFAQLPMSFGAKYE"
     gene            11857..12201
                     /gene="erpA"
                     /locus_tag="RHX79_000684"
     CDS             11857..12201
                     /gene="erpA"
                     /locus_tag="RHX79_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HDV2195890.1"
                     /translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG
                     FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA
                     KSTCGCGSSFSI"
     gene            complement(12248..12871)
                     /locus_tag="RHX79_000685"
     CDS             complement(12248..12871)
                     /locus_tag="RHX79_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HDV2195891.1"
                     /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
                     TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV
                     GIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
                     HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR"
     gene            complement(12909..13709)
                     /gene="btuF"
                     /locus_tag="RHX79_000686"
     CDS             complement(12909..13709)
                     /gene="btuF"
                     /locus_tag="RHX79_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter substrate-binding
                     protein BtuF"
                     /protein_id="HDV2195892.1"
                     /translation="MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITP
                     VGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGI
                     KVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFL
                     QFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGP
                     DQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD"
     gene            complement(13702..14400)
                     /gene="mtnN"
                     /locus_tag="RHX79_000687"
     CDS             complement(13702..14400)
                     /gene="mtnN"
                     /locus_tag="RHX79_000687"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HDV2195893.1"
                     /translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA
                     LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV
                     TAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK
                     IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS
                     SLMVESLVQKLAHG"
     gene            14484..16001
                     /gene="dgt"
                     /locus_tag="RHX79_000688"
     CDS             14484..16001
                     /gene="dgt"
                     /locus_tag="RHX79_000688"
                     /EC_number="3.1.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dGTPase"
                     /protein_id="HDV2195894.1"
                     /translation="MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA
                     IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDEL
                     TGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAAL
                     RLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW
                     RGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVAD
                     LEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFM
                     YLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFS
                     HPDVEQLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR
                     HRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ"
     gene            16131..17555
                     /gene="degP"
                     /locus_tag="RHX79_000689"
     CDS             16131..17555
                     /gene="degP"
                     /locus_tag="RHX79_000689"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegP"
                     /protein_id="HDV2195895.1"
                     /translation="MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM
                     LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN
                     GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS
                     DIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA
                     ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL
                     TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD
                     VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS
                     IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV
                     LDSKPSVLALNIQRGDSSIYLLMQ"
     gene            17710..18867
                     /gene="cdaR"
                     /locus_tag="RHX79_000690"
     CDS             17710..18867
                     /gene="cdaR"
                     /locus_tag="RHX79_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CdaR"
                     /protein_id="HDV2195896.1"
                     /translation="MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERI
                     GELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR
                     KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDL
                     NQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS
                     FGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ
                     RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKAMDNNGLLRRTLAAWFRHN
                     VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER"
     gene            complement(18956..19342)
                     /locus_tag="RHX79_000691"
     CDS             complement(18956..19342)
                     /locus_tag="RHX79_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3461 family protein"
                     /protein_id="HDV2195897.1"
                     /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK
                     SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD
                     DLRHLESVVTNKISEIEADLEKLTRK"
     gene            complement(19657..20481)
                     /gene="dapD"
                     /locus_tag="RHX79_000692"
     CDS             complement(19657..20481)
                     /gene="dapD"
                     /locus_tag="RHX79_000692"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HDV2195898.1"
                     /translation="MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALR
                     VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG
                     FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE
                     TGEIHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID"
     gene            complement(20512..23184)
                     /gene="glnD"
                     /locus_tag="RHX79_000693"
     CDS             complement(20512..23184)
                     /gene="glnD"
                     /locus_tag="RHX79_000693"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HDV2195899.1"
                     /translation="MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQ
                     RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP
                     LSDIDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT
                     NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD
                     IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL
                     HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF
                     DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVRNSAITGI
                     YSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ
                     WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF
                     IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR
                     DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ
                     LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW
                     HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI
                     FTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF
                     TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED
                     LFIIATADRRALNNELQQEVHQRLTEALNPNDKG"
     gene            complement(23246..24040)
                     /gene="map"
                     /locus_tag="RHX79_000694"
     CDS             complement(23246..24040)
                     /gene="map"
                     /locus_tag="RHX79_000694"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDV2195900.1"
                     /translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI
                     CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK
                     DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE
                     GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK
                     DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE"
     gene            24408..25133
                     /gene="rpsB"
                     /locus_tag="RHX79_000695"
     CDS             24408..25133
                     /gene="rpsB"
                     /locus_tag="RHX79_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDV2195901.1"
                     /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE
                     KTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA
                     LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA
                     ATVREGRSQDLASQAEESFVEAE"
     gene            25391..26242
                     /gene="tsf"
                     /locus_tag="RHX79_000696"
     CDS             25391..26242
                     /gene="tsf"
                     /locus_tag="RHX79_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDV2195902.1"
                     /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS
                     GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA
                     GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG
                     ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG
                     RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV
                     AAMSKQS"
     gene            26389..27114
                     /gene="pyrH"
                     /locus_tag="RHX79_000697"
     CDS             26389..27114
                     /gene="pyrH"
                     /locus_tag="RHX79_000697"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDV2195903.1"
                     /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL
                     VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA
                     RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV
                     VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF
                     NMNKPGALRRVVMGEKEGTLITE"
     gene            27406..27963
                     /gene="frr"
                     /locus_tag="RHX79_000698"
     CDS             27406..27963
                     /gene="frr"
                     /locus_tag="RHX79_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000622421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDV2195904.1"
                     /translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY
                     YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL
                     PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV
                     QKLTDAAIKKIEAALADKEAELMQF"
     gene            28055..29251
                     /gene="ispC"
                     /locus_tag="RHX79_000699"
     CDS             28055..29251
                     /gene="ispC"
                     /locus_tag="RHX79_000699"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDV2195905.1"
                     /translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE
                     QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIV
                     GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL
                     PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI
                     SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM
                     RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTA
                     LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKE
                     VMRLAS"
     gene            29440..30198
                     /gene="ispU"
                     /locus_tag="RHX79_000700"
                     /gene_synonym="uppS"
     CDS             29440..30198
                     /gene="ispU"
                     /locus_tag="RHX79_000700"
                     /gene_synonym="uppS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308203.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl-diphosphate-specific
                     ditrans,polycis-undecaprenyl-diphosphate synthase"
                     /protein_id="HDV2195906.1"
                     /translation="MLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKA
                     GAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH
                     NVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEK
                     VQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDV
                     LWPDFDEQDFEGALNAFANRERRFGGTEPGDETA"
     gene            30211..31068
                     /gene="cdsA"
                     /locus_tag="RHX79_000701"
     CDS             30211..31068
                     /gene="cdsA"
                     /locus_tag="RHX79_000701"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414717.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDV2195907.1"
                     /translation="MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWG
                     QLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVALLL
                     VLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMIL
                     VWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVAPV
                     TLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC
                     LLLLVFRTL"
     gene            31080..32432
                     /gene="rseP"
                     /locus_tag="RHX79_000702"
     CDS             31080..32432
                     /gene="rseP"
                     /locus_tag="RHX79_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma E protease regulator RseP"
                     /protein_id="HDV2195908.1"
                     /translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF
                     GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIA
                     AGPVANFIFAILAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETP
                     DWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR
                     GPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI
                     ERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT
                     WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI
                     INLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
                     "
     gene            32462..34894
                     /gene="bamA"
                     /locus_tag="RHX79_000703"
     CDS             32462..34894
                     /gene="bamA"
                     /locus_tag="RHX79_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDV2195909.1"
                     /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL
                     SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN
                     KSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR
                     NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK
                     LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN
                     LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT
                     VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL
                     GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL
                     GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS
                     YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK
                     TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD
                     HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY
                     DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD
                     MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK
                     AEQFQFNIGKTW"
     gene            35016..35501
                     /gene="skp"
                     /locus_tag="RHX79_000704"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
     CDS             35016..35501
                     /gene="skp"
                     /locus_tag="RHX79_000704"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone Skp"
                     /protein_id="HDV2195910.1"
                     /translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN
                     TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE
                     QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV
                     K"
     gene            35505..36530
                     /gene="lpxD"
                     /locus_tag="RHX79_000705"
     CDS             35505..36530
                     /gene="lpxD"
                     /locus_tag="RHX79_000705"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDV2195911.1"
                     /translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN
                     PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP
                     SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI
                     YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG
                     ALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH
                     MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE
                     RKVNQQD"
     gene            36635..37090
                     /gene="fabZ"
                     /locus_tag="RHX79_000706"
     CDS             36635..37090
                     /gene="fabZ"
                     /locus_tag="RHX79_000706"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000210741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDV2195912.1"
                     /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV
                     SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK
                     RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
     gene            37094..37882
                     /gene="lpxA"
                     /locus_tag="RHX79_000707"
     CDS             37094..37882
                     /gene="lpxA"
                     /locus_tag="RHX79_000707"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDV2195913.1"
                     /translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVL
                     KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT
                     VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH
                     QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA
                     YKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFARSTRGLIR"
     gene            37882..39030
                     /gene="lpxB"
                     /locus_tag="RHX79_000708"
     CDS             37882..39030
                     /gene="lpxB"
                     /locus_tag="RHX79_000708"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDV2195914.1"
                     /translation="MTEQRPLTIALVAGETSGDILGAGLIRALKERVPNARFVGVAGP
                     RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDIFVGIDAPDF
                     NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP
                     CRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL
                     LRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDLSVHLLDGMGREAMVASDAALLASG
                     TAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP
                     QKLAAALLPLLANGKTSHAMHDTFRELHQQIRCNADEQAAQAVLELAQ"
     gene            39027..39623
                     /gene="rnhB"
                     /locus_tag="RHX79_000709"
     CDS             39027..39623
                     /gene="rnhB"
                     /locus_tag="RHX79_000709"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDV2195915.1"
                     /translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN
                     DSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP
                     EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA
                     QHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS"
     gene            39660..43142
                     /gene="dnaE"
                     /locus_tag="RHX79_000710"
     CDS             39660..43142
                     /gene="dnaE"
                     /locus_tag="RHX79_000710"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDV2195916.1"
                     /translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF
                     TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLIS
                     KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE
                     HFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA
                     IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY
                     FLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERLKRRPEYDERLETELQVINQ
                     MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL
                     NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG
                     HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA
                     GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN
                     WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ
                     PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYG
                     IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAEL
                     AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV
                     GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG
                     GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAK
                     AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE
                     IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML
                     FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISL
                     TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL
                     RGLIGSEQVELEFD"
     gene            43155..44114
                     /gene="accA"
                     /locus_tag="RHX79_000711"
     CDS             43155..44114
                     /gene="accA"
                     /locus_tag="RHX79_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HDV2195917.1"
                     /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR
                     EKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV
                     GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF
                     IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN
                     MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH
                     RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA"
     gene            44213..46354
                     /gene="ldcC"
                     /locus_tag="RHX79_000712"
     CDS             44213..46354
                     /gene="ldcC"
                     /locus_tag="RHX79_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase LdcC"
                     /protein_id="HDV2195918.1"
                     /translation="MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLK
                     FIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWF
                     FEYALGQAEDIAIRMRQYTDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQK
                     SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTN
                     GTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIP
                     RREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWV
                     PYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEA
                     FMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWF
                     FDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEG
                     IPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRI
                     KNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAFDTLPEMIMTPHQAW
                     QRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSV
                     GQHYPGFETDIHGAKQDEDGVYRVRVLKMAG"
     gene            46411..46800
                     /locus_tag="RHX79_000713"
     CDS             46411..46800
                     /locus_tag="RHX79_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308216.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDV2195919.1"
                     /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSW
                     KGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEA
                     IRVDPYTQKRFTFFNDPDGLPLELYEQ"
     gene            46865..48163
                     /gene="tilS"
                     /locus_tag="RHX79_000714"
     CDS             46865..48163
                     /gene="tilS"
                     /locus_tag="RHX79_000714"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDV2195920.1"
                     /translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTL
                     RAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA
                     RTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMGEVSEFAGTRLIRPLLARTR
                     GELAQWALAHGLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAE
                     QESLLDELLADDLAHCQTSQGTLQIAPMLAMSDARRAAIIRRWLAGQNAPMPSRDALV
                     RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSETIVPWQTWLQPLELPA
                     GLGSVQLTAGGDIRPPRADEAVSVRFKAAGLLHIVGRNGGRKLKKIWQELGVPPWLRD
                     TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS"
     gene            complement(48212..48472)
                     /gene="rof"
                     /locus_tag="RHX79_000715"
     CDS             complement(48212..48472)
                     /gene="rof"
                     /locus_tag="RHX79_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rho-binding antiterminator"
                     /protein_id="HDV2195921.1"
                     /translation="MSMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASD
                     LVSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES"
     gene            complement(48459..48659)
                     /locus_tag="RHX79_000716"
     CDS             complement(48459..48659)
                     /locus_tag="RHX79_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeP family protein"
                     /protein_id="HDV2195922.1"
                     /translation="MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALS
                     EAVREKAAYAAANLLVSDYVNE"
     gene            48825..49370
                     /locus_tag="RHX79_000717"
     CDS             48825..49370
                     /locus_tag="RHX79_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
                     /protein_id="HDV2195923.1"
                     /translation="MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRL
                     LAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEV
                     ALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGV
                     IWLSDDKNNLEVNLTAWQQPS"
     gene            49367..49789
                     /gene="arfB"
                     /locus_tag="RHX79_000718"
     CDS             49367..49789
                     /gene="arfB"
                     /locus_tag="RHX79_000718"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDV2195924.1"
                     /translation="MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIR
                     ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQ
                     KARRPTRPTRASKERRLASKAQKSSVKAMRGKVRSGRE"
     gene            49803..50513
                     /gene="nlpE"
                     /locus_tag="RHX79_000719"
                     /gene_synonym="cutF"
     CDS             49803..50513
                     /gene="nlpE"
                     /locus_tag="RHX79_000719"
                     /gene_synonym="cutF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706138.1"
                     /note="NlpE, an outer membrane lipoprotein, interacts
                     directly with CpxA, the sensor histidine kinase of the Cpx
                     system for response to envelope stress; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response activation lipoprotein
                     NlpE"
                     /protein_id="HDV2195925.1"
                     /translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS
                     WRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD
                     SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAA
                     TFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEANPDTGAPTKVLA
                     PDTAGKFYPNKDCSSLGQ"
     gene            complement(50668..51491)
                     /locus_tag="RHX79_000720"
                     /pseudo
     CDS             complement(50668..51491)
                     /locus_tag="RHX79_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414735.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YaeF family permuted papain-like enzyme"
     gene            complement(51545..53263)
                     /gene="proS"
                     /locus_tag="RHX79_000721"
     CDS             complement(51545..53263)
                     /gene="proS"
                     /locus_tag="RHX79_000721"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDV2195926.1"
                     /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP
                     TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER
                     PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA
                     YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE
                     DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK
                     TVKTLLVKAVEGSSFPLVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG
                     PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVA
                     GDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR
                     VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL
                     LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL
                     VKQIKG"
     gene            complement(53375..54082)
                     /gene="tsaA"
                     /locus_tag="RHX79_000722"
     CDS             complement(53375..54082)
                     /gene="tsaA"
                     /locus_tag="RHX79_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HDV2195927.1"
                     /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQ
                     ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM
                     SLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
                     MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNV
                     RWRVTDAGFEVFALEPR"
     gene            complement(54079..54483)
                     /gene="rcsF"
                     /locus_tag="RHX79_000723"
     CDS             complement(54079..54483)
                     /gene="rcsF"
                     /locus_tag="RHX79_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rcs stress response system protein RcsF"
                     /protein_id="HDV2195928.1"
                     /translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP
                     RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKAN
                     AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK"
     gene            complement(54601..55416)
                     /gene="metQ"
                     /locus_tag="RHX79_000724"
     CDS             complement(54601..55416)
                     /gene="metQ"
                     /locus_tag="RHX79_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HDV2195929.1"
                     /translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ
                     VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK
                     LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG
                     VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI
                     FVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
     gene            complement(55456..56109)
                     /gene="metI"
                     /locus_tag="RHX79_000725"
     CDS             complement(55456..56109)
                     /gene="metI"
                     /locus_tag="RHX79_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease MetI"
                     /protein_id="HDV2195930.1"
                     /translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG
                     QIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP
                     FIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY
                     SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK"
     gene            complement(56102..57133)
                     /gene="metN"
                     /locus_tag="RHX79_000726"
     CDS             complement(56102..57133)
                     /gene="metN"
                     /locus_tag="RHX79_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HDV2195931.1"
                     /translation="MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGK
                     STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN
                     VALPLELDNTPKDEIKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK
                     VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE
                     LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQ
                     SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH
                     VKVEVLGYV"
     gene            57321..57893
                     /gene="gmhB"
                     /locus_tag="RHX79_000727"
     CDS             57321..57893
                     /gene="gmhB"
                     /locus_tag="RHX79_000727"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDV2195932.1"
                     /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK
                     MGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE
                     FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAAAANVGTKVLVRTGKP
                     ITPEAENAADWVLNSLADLPQAIKKQQKPA"
BASE COUNT        13753 a        14391 c        15962 g        13919 t
ORIGIN      
        1 ggaccgatcg agcacaaatt ttgagagata tcttcttctg tcttgtaaca gaagaacaga
       61 aaatcgggct tttgcgcctg aatattgcgg agaaaaagca tggccgggaa tgaccgcgag
      121 ccaattggac gcaaagggaa accgacgcgt ccggtcaaac aaaaggtaag ccgtcgtcgt
      181 tacgaagatg acgatgatta cgacgattat gatgactatg aggatgaaga accgatgccg
      241 cgcaaaggta agggcaaagg caaagggcgt aagcctcgtg gcaaacgcgg ctggctatgg
      301 ctgctgttaa aactggctat cgtttttgcc gtgctgatcg ccatttacgg cgtttatctc
      361 gatcaaaaaa ttcgtagccg tattgatggc aaggtctggc aactgcctgc ggcagtttat
      421 ggccgaatgg tcaaccttga gccagatatg accatcagca agaacgagat ggtgaagctg
      481 ctggaggcga ctcagtatcg tcaggtgtcg aaaatgaccc gtcctggcga atttaccgtg
      541 caggccaaca gcattgagat gatccgccgt ccgtttgatt tcccggacag taaagaaggg
      601 caggtgcgtg cgcgtctgac ctttgatggc gatcatctgg cgacgatcgt caatatggag
      661 aacaaccgtc agttcggctt tttccgtctt gatccgcgtc tgatcaccat gatctcctcg
      721 ccaaacggtg agcaacgtct gtttgtgccg cgcagtggtt tccctgattt gctggtggat
      781 actttgctgg cgacagaaga ccgccatttc tacgagcatg atgggatcag cctctactca
      841 attgggcgtg cggtgctggc aaacctgacc gcaggtcgca cggtgcaggg tgcgagtacg
      901 ctgacgcaac agctggtgaa aaacctgttc ctctccagcg agcgctctta ctggcgtaaa
      961 gcgaacgaag cctacatggc gctgatcatg gacgcgcgtt acagcaaaga ccgtattctt
     1021 gagctgtata tgaacgaggt gtatctcggt cagagcggcg acaacgaaat ccgcggcttc
     1081 ccgctggcaa gcttgtatta ctttggtcgc ccggtagaag agctaagcct cgaccagcag
     1141 gcgctgttag tcggtatggt gaaaggggcg tccatctaca acccgtggcg taacccaaaa
     1201 ctggcgctgg agcgacgtaa tctggtgctg cgtctgctgc aacagcaaca gattattgat
     1261 caagaactct atgacatgtt gagtgcacgt ccgctgggtg ttcagccgcg cggtggggtg
     1321 atctctccac agccagcctt tatgcaactg gtgcgtcagg agctgcaggc gaaattaggc
     1381 gataaggtaa aagatctctc cggcgtgaag atcttcacta cctttgactc ggtggcccag
     1441 gacgcggcag aaaaagccgc cgtggaaggc attccggcac tgaagaaaca gcgtaagttg
     1501 agcgatcttg aaactgcgat tgtggtcgtc gaccgcttta gtggtgaagt tcgtgcgatg
     1561 gtcggtggtt ctgagccgca gtttgcgggc tacaaccgtg cgatgcaggc gcgtcgttcg
     1621 attggttccc ttgcaaaacc agcgacttat ctgactgcct taagccagcc gaaaatatat
     1681 cgcctgaaca cgtggatcgc ggatgcgcca attgcgctgc gtcagccgaa tggccaggtc
     1741 tggtcaccgc agaacgatga ccgtcgttat agcgaaagcg gcagagtgat gctggtggat
     1801 gcgttgaccc gttcgatgaa cgtgccgacg gtaaatctgg ggatggcgct ggggctgcct
     1861 gcagttacgg atacctggat caaactgggc gtaccgaaag atcagctgca tccggttccg
     1921 gcgatgctgc tgggggcgtt gaacttaacg ccaatcgaag tggcgcaggc gttccagacc
     1981 atcgccagcg gtggtaaccg tgcaccgctt tctgcactgc gttcggtaat cgcggaagat
     2041 ggcaaggtgc tgtatcagag cttcccgcag gcagaacgcg ctgttccggc gcaggcggcg
     2101 tatctgacac tatggaccat gcagcaggtg gtacaacgtg gtacgggtcg tcagcttggg
     2161 gcgaaatacc cgaacctgca tctggcaggg aaaacaggga ctaccaacaa taacgtagat
     2221 acctggtttg caggcattga cggcagcacg gtgaccatca cctgggtagg ccgtgataac
     2281 aaccagccga ccaaactgta tggagccagc ggggcaatgt cgatttatca gcgttatctg
     2341 gctaaccaga cgccaacgcc gctgaatctt gttccgccag aagatattgc agatatgggc
     2401 gtggactacg acggcaactt tgtttgcagc ggtggcatgc gtgtcttgcc ggtctggacc
     2461 agcgatccgc aatcgctgtg ccagcagagc gagatgcagc agcagccgtc aggcaatccg
     2521 tttgatcagt cttctcagcc gcagcaacag ccgcaacagc aacctgctca gcaagagcag
     2581 aaagacagcg acggtgtagc cggttggatc aaggatatgt ttggtagtaa ttaacatcta
     2641 agcgtgaaat accggatggc gagttgccat ccggtaaaat aacatcccat ctaagatatt
     2701 aaccctttct tttcatctgg ttgtttatta acccttcagg aacgctcaga ttgcgtaccg
     2761 cttgcgaacc cgccagcgtt tcgaatatta tcttatcttt ataataatca ttctcgttta
     2821 cgttatcatt cactttacat cagagatata ccaatggcgc gttccaaaac tgctcagcca
     2881 aaacactcac tgcgtaaaat cgcagttgta gtagccacag cggtaagcgg catgtctgtt
     2941 tatgcacagg cagcggttga accgaaagaa gacactatca ccgttaccgc tgcacctgcg
     3001 ccgcaagaaa gcgcatgggg gcctgctgca actattgcgg cgcgacagtc tgctaccggc
     3061 actaaaaccg atacgccgat tcaaaaagtg ccacagtcta tttctgttgt gaccgccgaa
     3121 gagatggcgc tgcatcagcc gaagtcggta aaagaagcgc ttagctacac gccgggtgtc
     3181 tctgttggta cgcgtggcgc atccaacacc tatgaccacc tgatcattcg cggctttgcg
     3241 gcagaaggcc aaagccagaa taactatctg aatggcctga agttgcaggg caacttctat
     3301 aacgatgcgg tcattgaccc gtatatgctg gaacgcgctg aaattatgcg tggcccggtt
     3361 tccgtgcttt acggtaaaag cagtcctggc ggcctgttga atatggtcag caagcgtccg
     3421 accaccgaac cgctgaaaga agttcagttt aaagccggta ctgacagcct gttccagact
     3481 ggttttgact ttagcgattc gttggatgat gacggtgttt actcttatcg cctgaccggt
     3541 cttgcgcgtt ctgccaatgc ccagcagaaa gggtcagaag agcagcgtta tgctattgca
     3601 ccggcgttca cctggcgtcc ggatgataaa accaatttta ccttcctttc ttacttccag
     3661 aacgagccgg aaaccggtta ttacggctgg ttgccgaaag agggaaccgt tgagccgctg
     3721 ccgaacggta agcgtctgcc gacagacttt aatgaagggg cgaagaacaa cacctattct
     3781 cgtaatgaga agatggtcgg ctacagcttc gatcacgaat ttaacgacac ctttactgtg
     3841 cgtcagaacc tgcgctttgc tgaaaacaaa acctcgcaaa acagcgttta tggttacggc
     3901 gtctgctccg atccggcgaa tgcttacagc aaacagtgtg cggcattagc gccagcggat
     3961 aaaggccatt atctggcacg taaatacgtc gttgatgatg agaagctgca aaacttctcc
     4021 gttgataccc agttgcagag caagtttgcc actggcgata tcgaccacac cctgctgacc
     4081 ggtgtcgact ttatgcgtat gcgtaatgac atcaacgcct ggtttggtta cgacgactct
     4141 gtgccactgc tcaatctgta caatccggtg aataccgatt tcgacttcaa tgccaaagat
     4201 ccggcaaact ccggccctta ccgcattctg aataaacaga aacaaacggg cgtttatgtt
     4261 caggatcagg cgcagtggga taaagtgctg gtcaccctgg gcggtcgtta tgactgggca
     4321 gatcaagaat ctcttaaccg cgttgctggg acgaccgata aacgtgatga caaacagttt
     4381 acctggcgtg gtggtgttaa ctacctgttt gataatggtg taacacctta cttcagctat
     4441 agcgaatcgt ttgaaccttc ttcgcaagtt gggaaggatg gtaatatttt cgcaccgtct
     4501 aaaggtaagc agtatgaagt cggcgtgaaa tatgtaccgg aagatcgtcc gattgtagtt
     4561 actggtgccg tgtataatct cactaaaacc aacaacctga tggcggaccc tgagggttcc
     4621 ttcttctcgg ttgaaggtgg cgagatccgc gcacgtggcg tagaaatcga agcgaaagcg
     4681 gcgctgtcgg cgagtgttaa cgtagtcggt tcttatactt acaccgatgc ggaatacacc
     4741 accgatacta cctataaagg caatacgcct gcacaggtgc caaaacacat ggcttcgctg
     4801 tgggctgact ataccttctt tgacggtccg ctttcaggtc tgacgctggg caccggtggt
     4861 cgttatactg gctccagcta tggtgatccg gctaactcct ttaaagtggg aagttatacg
     4921 gtcgtggatg cgttagtgcg ttatgatctg gcgcgagtcg gcatggcggg ctccaacgtg
     4981 gcgctgcatg ttaacaacct gttcgatcgt gaatacgtcg ccagctgctt taacacttat
     5041 ggctgcttct ggggcgcaga acgtcaggtc gttgcaaccg caaccttccg tttctaattt
     5101 ctcttttggg gcacggattt ccgtgcccat ttcacaagtt ggctgttatg caggaataca
     5161 cgaatcattc cgataccact tttgcactgc gtaatatctc ctttcgtgtg cccgggcgca
     5221 cgcttttgca tccgctgtcg ttaacctttc ctgccgggaa agtgaccggt ctgattggtc
     5281 acaacggttc tggtaaatcc actctgctca aaatgcttgg ccgtcatcag cctccgtcag
     5341 aaggggagat tcttcttgat gcccagccgc tggaaagctg gagcagcaaa gcgtttgccc
     5401 gcaaagtggc ttatttgccg cagcagcttc ctccggcaga agggatgacc gtgcgtgaac
     5461 tggtggcgat tggtcgttac ccgtggcatg gcgcgctggg gcgctttggt gcggcagatc
     5521 gcgaaaaggt cgaggaagct atctcgctgg ttggcttaaa accgctggcg catcggctgg
     5581 tcgatagtct ctctggcggc gaacgtcagc gggcgtggat cgccatgctg gtggcgcagg
     5641 atagccgttg tctgttgctc gacgaaccga cttcggcgct ggatatcgcc caccaggttg
     5701 atgtgctggc gctggtgcac cgtttaagtc aggaacgtgg catgacggtc attgccgtgc
     5761 tgcacgatat caatatggcg gcacgctact gtgattatct ggtcgccctg cgcggtggtg
     5821 aaatgattgc tcagggaacg cctgcggaaa ttatgcgcgg cgaaaccctc gaaatgattt
     5881 atggcatccc gatgggtatt ttgccgcatc cggcgggtgc tgcacctgtg agttttgttt
     5941 attgatgagc ggcttacctc ttatttcgcg ccgtcgactg ttaacggcga tggcgctttc
     6001 tccgttgtta tggcagatga ataccgccca cgcggcggct attgacccca atcgtattgt
     6061 ggcgctggag tggttgccgg tggaattact gctggcgctc ggcatcgtgc cttacggcgt
     6121 ggcggatacc atcaactatc gcctgtgggt cagcgaacca ccattgccgg actcagtgat
     6181 tgacgtcggt ttgcgtacag aacctaacct tgaactgctg accgaaatga aaccgtcgtt
     6241 tatggtctgg tcggcaggat atggcccttc atcagaaatg ctggcacgta ttgcgccggg
     6301 tcgcggattt aacttcagtg acggcaaaca gccgttggcg atggcgcgta aatcgctgac
     6361 ggaaatggca gatttactta acctgcaaag cgcagcggaa acgcatttag cgcaatacga
     6421 agactttatc ctcagcatga aaccccgctt tgtgaagcgt ggtgcacgcc cgttactgct
     6481 gacgacgctt atcgatccgc gccatatgct ggtcttcggt ccaaacagct tgttccagga
     6541 aattctcgat gagtacggca tcccaaatgc ctggcaaggg gaaaccaact tctggggcag
     6601 taccgccgtc agtatcgatc gtctggcggc gtataaagac gttgatgtgc tctgttttga
     6661 tcacgacaac agcaaagaca tggatgcgct aatggcaacc ccgctgtggc aggccatgcc
     6721 gtttgtccgt acagggcgct ttcagcgcgt acccgcagtc tggttttatg gtgcaacgct
     6781 ttcggcaatg cactttgtgc gtgttctgga taacgccatc ggaggtaaag cgtgagtaaa
     6841 cgaattgcgc ttttcccggc gttattgctg gcgctgttag tgattgtcgc tacggcgcta
     6901 acctggatga acttctcaca ggcgctgccg cgcagtcagt gggcgcaggc cgcctggtcg
     6961 ccgtatattg acgtcatcga gcagatgatt tttcactaca gcttgttgcc gcgtctggcg
     7021 atttcgctgc tggtgggcgc aggcctgggg ctggtgggcg tgctgtttca gcaagtgctg
     7081 cgtaatccgc tggcggaacc gacgacactt ggcgttgcta caggcgcgca actgggaatt
     7141 accgtcacca cactttgggc gatcccaggt gctatggcga gccagtttgc cgcactggtg
     7201 ggcgcttgtg tcgttggctt aatcgtcttt ggcgtcgcgt gggggaaacg gctttcgccg
     7261 gttacgctta ttctcgcggg gctggtggtg agcctttatt gcggggcaat taatcagcta
     7321 ctggttatct tccatcacga ccagctgcaa agcatgttcc tgtggagcac cggaacgctg
     7381 acgcaaaccg actggggcgg cgttgagcgt ttatggccgc agttgctggg cggcgtgatg
     7441 ttgacgttat tgctacttcg cccgttaacc ctgatggggc ttgatgatgg cgtggcgcgc
     7501 aatctcgggc tggccttgtc gctcgcgcgt ctggcagcgc tgtcgctggc gattgtcatc
     7561 agtgcgctgc tggtgaacgc tgtggggatt atcggcttta tcgggttgtt cgcgccgctg
     7621 ctggcaaaaa tgctgggggc gcggcgtctg ctgccacgac tgatgctggc gtcgctgatt
     7681 ggggcgctga tcctctggct ttccgatcaa atcatcctct ggctgactcg cgtgtggatg
     7741 gaagtgtcca ccggttcggt cactgcgttg atcggtgcgc cgctgctact gtggctgttg
     7801 ccgcgtttac gcagcattag cgcgccggat atgaaggtca acgatcgtgt cgcggctgaa
     7861 cgccaacatg tgctggcgtt tgcccttgct ggcggtgtgc tgctgataat tgctgtggtg
     7921 gtggcgctgt cgtttggtcg tgatgcgcac ggctggacgt gggcgagcgg ggcgctgctc
     7981 gatgatttaa tgccctggcg ctggccgcga attatggcgg cgctgtttgc gggcgtcatg
     8041 ctggcggtgg cgggctgtat tattcagcgg ctgaccggaa acccgatggc aagcccggaa
     8101 gtgctgggga ttagctccgg cgcggcgttt ggcgtggtgt tgatgctgtt tctggtgccg
     8161 ggtaatgcct ttggctggct gttacctgca ggcagtctcg gcgcggcggt gacgctgttg
     8221 atcattatga tcgccgccgg ccgcggtgga ttttccccac accgcatgtt actggcgggg
     8281 atggcgttaa gcaccgcgtt caccatgctt ttgatgatgt tgcaggcaag tggtgacccg
     8341 cgaatggcgc aagtgctgac ctggatttcc ggttcgacct acaacgcgac cgatgcgcag
     8401 gtctggcgca ccggaattgt gatggtgatt ttgctggcga ttaccccgct gtgccgccgc
     8461 tggctgacca ttttaccgct gggtggtgat accgcccgag ccgtaggaat ggcgctgacg
     8521 ccgacgcgaa ttgcgctgct gctgttagcg gcttgcctga cggcgaccgc gacgatgact
     8581 attggaccgt tgagttttgt tggtttaatg gcaccgcata ttgcgcggat gatgggcttt
     8641 cgacggacga tgccacacat cgtaatttcg gcgctggtgg gtggtttact gctggtgttc
     8701 gctgactggt gtgggcggat ggtgctgttt ccattccaga tcccggcggg gctgctgtca
     8761 acctttatcg gcgcgccata ttttatctat ttgttgagaa agcagagccg ttaattgaat
     8821 gcctcgcccg gtgggcgagg caaaatcatc acaacttcgc aaacacccga cgtgcagcat
     8881 cgatggtgtt attgatatct tccatgctgt gcgccacgga cataaagccc gcttcaaacg
     8941 ctgacggtgc caggtaaaca ccttcatcca gcatcatatg gaagaaacgc ttaaagcgtt
     9001 ccacgtcaca ggccatcaca tcctgatagc acgtcacgga ctcggcgtcg gtaaagaaaa
     9061 taccgaacat gccgccaacg tggttaacga ccagcggaat tccggcttct tctgccgctt
     9121 ccagcagacc ttctgccaga cgtgatgtca gctcatccaa cgtttcgtga acgcccggtt
     9181 gcgcgacttc attcagacag gcgaaacccg ctgccatcgc aattgggtta ccggaaagcg
     9241 tacccgcctg atagaccgga cccgtcgggg ccagcgcatc cattacatca cgacgaccac
     9301 cgaatgcgcc taccggcatt ccaccgccga tgattttgcc caggcaggtg agatccggtt
     9361 ccacaccgta ataatcctgt gcgccagcta gcgctacgcg gaagccagtc attacttcat
     9421 cgatgatcag caatgcgcca aattcgtcgc acagcgcgcg cagacctggc aggaactctg
     9481 gcagcggtgg aacgcagttc atattgcctg ccaccggctc gacgataata caggcaatct
     9541 cttgcgggta ttgctcaaac gcggcgcgta cagaagccag atcgttataa gtacaggtta
     9601 aggtatgttt ggcgaaatct gccggaacac ccggcgagtt tggctggcct aacgtgagtg
     9661 cgccagaacc ggctttcacc agcaggcagt cagcgtgacc gtggtaacaa ccttcaaatt
     9721 taatgatttt gtcgcgaccg gtaaaaccac gggccaggcg gatggcgctc atggtcgctt
     9781 cagtgccgga gttcaccatg cgcaccatat ccatggtcgg gaccagttcg gtcaccagtt
     9841 gcgccatttt cacttccatt tcggttggtg caccaaagct taaaccacgc tcggcggctt
     9901 caatcacggc attgcggatc gccggatggt tatggcccag caccatcggc ccccaggaac
     9961 cgacataatc gatataggct ttgccatcaa catcgtacag ataggcgccg tccgcttttt
    10021 cgataaacag tggagtgccg cccacgccag taaaggcgcg aacaggggag ttcacaccgc
    10081 cagggatcag ctcgcgcgct gcgctgtaaa gattttcaga cttactcatg gagggttcct
    10141 gattcgtaga aaaagtgaat ggctgctatt ctatgttatt cataacaagt taaatactcg
    10201 tcaaacatca ggctgcttgt actggtgcaa tcctgatttc ttagagtata aaagttttgt
    10261 gcatttgaaa cattacgctt tgcaaaggat tttcatggaa cgtgcgagta aaatgccgtc
    10321 atcttatttg tatgaccaat aagtgatcat tggatgaaaa ctgatactcc ctctttagaa
    10381 acaccgcagg ccgcgcgcct gcgacgcaga caactgattc gccaacttct tgagcgcgat
    10441 aaaaccccgt tagccatttt gtttatggcg gcagtcgtcg gcacgcttgt cgggctggca
    10501 gcggttgctt ttgacaaagg tgtcgcctgg ttgcagaacc aacgtatggg ggcgctggta
    10561 catactgctg ataattatcc gcttctgtta accgtcgctt ttctctgttc ggcggtgctg
    10621 gcgatgttcg gctacttttt ggtgcgcaaa tacgcgccgg aagcaggtgg ttcggggatc
    10681 ccggaaattg aaggggcgct ggaagatcaa cgtcccgttc gctggtggcg tgtgttgccg
    10741 gtgaaattct ttggcgggct ggggacactc ggcggaggca tggtgctagg gcgcgaagga
    10801 ccaaccgtgc agatcggcgg caatatcggt cgcatggtgc ttgatatttt ccgcctgaaa
    10861 ggtgatgaag ctcgccatac gctgctggca accggtgctg ctgcggggct ggctgcggcc
    10921 tttaacgcgc cgctggcggg tattttgttt attatcgaag agatgcgtcc gcagtttcgc
    10981 tatacgttaa tttcgattaa agcggtattt attggcgtca ttatgtcgac cattatgtac
    11041 cggattttta atcatgaagt tgcgttgatt gacgtcggta aactttctga tgcgccgctt
    11101 aatacgctgt ggctttatct gatcctcggt attatttttg gcattttcgg ccctattttt
    11161 aataaatggg tgctggggat gcaggatttg ctgcaccgtg tgcacggcgg caatattacc
    11221 aaatgggtac tgatgggtgg tgcgattggc ggtctgtgtg gattgctggg gtttgtggca
    11281 ccagcaacgt cgggcggcgg ttttaacctg attcctatcg ctaccgcggg gaatttcagc
    11341 atgggaatgc tggtgtttat cttcgtcgct cgggtcatta ccaccttact ctgcttctct
    11401 tccggcgcgc cgggcggtat ttttgccccg atgctggcgc tgggtactgt gctgggaacc
    11461 gctttcggaa tggttgccgt tgagctgttt ccgcaatatc acctggaggc ggggacgttt
    11521 gctattgccg gaatgggggc attactggcg gcatctattc gcgcgccgtt aacggggatc
    11581 attctggttc tggagatgac cgataactac cagctcattt tgccaatgat tattaccggt
    11641 cttggcgcaa cattattagc gcaatttacc ggcgggaaac cgctatactc ggcgattctt
    11701 gcgcgcacgc tggcaaaaca ggaagctgag caactggcgc gaagcaaggc cgcatcagcc
    11761 agcgagaata cttgaacgaa ataccagggt attagataat ggcgattatt attgggttag
    11821 aatttgccca attgccgatg tcgtttggag caaaatatga gtgatgacgt agcactgccg
    11881 ctggagttta ccgacgcagc agccaacaaa gttaaaagcc tgatcgctga cgaagataac
    11941 ccgaatctga aattacgcgt gtatatcacc ggtggcggtt gcagcggctt ccagtatggt
    12001 ttcacctttg atgatcaggt gaacgaaggc gatatgacca tcgaaaaaca gggcgttggc
    12061 ctggtggttg atccgatgag cctgcaatat ctggtcggcg gttccgttga ctacaccgaa
    12121 ggactggaag gttctcgttt catcgtgacc aacccgaacg cgaaaagcac ctgcggttgc
    12181 ggttcttcct ttagcatcta atctgttgtt catgtgccgg ataaactatc cggcacatct
    12241 tctctcttca acgcccattc tcatccagcg caaacgtcgg tagcttaaga tgccaacgaa
    12301 tagccgccag ccgaatcaat agcgtcacga ccatgcccat catactggct gtttccagtg
    12361 gtacggaaaa tgtgtaataa gccgtagcgt ggacaatacc gccgataata caggcagttg
    12421 cgtagatttc tgtacgtaaa atcatgggga tctcgcgggc cagtacatca cgaatgatcc
    12481 cgccgccaac gccagtaatg acgcccatgc aaaccgcgat taacggaccg gcttccgcat
    12541 taaaggcttt attcacgcca atgccgacaa acaccgccag accaacggcg tccagcaccg
    12601 gcaacatcca ttttggtaag cgtcttggct ggcgcaccag cacgatggtc agcatgctgg
    12661 tgaccattgc aacgaccaga tcggtgggat ctttcaccca aaataccggg ccgtgatcca
    12721 gcgccatgtc gcgaattgtt ccgccgccta ctgcggtaac cacgcccagt accagaacac
    12781 caaaagggtc catacgcaat tttccggcta acaaaacgcc ggagatggca aataccgctg
    12841 tgccgactat atccagccaa tagacgagca ttgttcaatc cccactgagc acctgaaaag
    12901 gtcaggcact aatctacctg tgaaagcgca ttacagagct gttgtgcagc gaggataata
    12961 cgtgggcttg cacgttcaaa ccagtcactc gtgagaggaa taacgggaat tttgagctgt
    13021 tcaccccagt attgtttgat tttaggaatt tggtccggtc cgcctgtaat gacaatcgcc
    13081 tgtggcgagc gtgctaacac ctgttcgcgg ctaacttgcg gccagggaac ccggctgtct
    13141 ttaaagatgt tttctccgcc acaaacttcg agtacctggt tctgaatcga ctcttttcca
    13201 ctggtaaatg gcggattaat gccgaattgc agaaaaacac gttttttagg tttatcagca
    13261 tattgcgctt tcaattgcgc gtactgatcc agcagggatt gcgcggcttg ttcggccttg
    13321 tctggttgcg gactccaggg ggccagttga cgtaacgcat tggcaatttg ttcaatgctt
    13381 gtcgcatcga cccacatcac ttttattccc agcgaagcca gctggtcaac ctgccgctcg
    13441 gcattacctc cacgccaggc aatcaccaga tcgggcttca gcgcgacaat gcgttccaga
    13501 ttcatcccct gccaggtgga aacctgctca atcttttgcg cttgtggagg atagtcggaa
    13561 tagctgctga ccccaaccgg cgtgatcccg gcagcaaagg caagttcagt gttggcggga
    13621 gaaagcgtga tgacgcgcgg cgcggcgttg agccacagtg gcgcaagaaa agacagggcg
    13681 accagcgccc tgaacagtga cttagccatg tgcaagtttc tgcaccagtg actcaaccat
    13741 caggctggac tgtttagcgg caacagccag gaactcatcg aagctaagat gagactgttg
    13801 atcggccacg tcggagatgg cgcgtacgac aacaaacggg acgttgaaat tgtggcagac
    13861 atgggcgatt gccgtcgctt ccatctctac agcaatggcc tgtgggaagt tgtggcggat
    13921 tttcgccaga ccaacagaac cgttgatgaa agcgtcgccg ctaacaatca ggccacgtac
    13981 agcgttaaga ttcagttcgg caatgcaggc ctcagcggca gcgatcagtt tatcgtcagc
    14041 tttaaagcct gccggacagc ctggtaactg accgtattca taaccaaatg ccgtgacatc
    14101 cgcgtcgtga taacgtgctt cgtccgagac aacgatatcg cccactttca acgttggtgc
    14161 caggccaccg gcagaaccgg tgttaataat cacatctggc ttgcagtgtt ccaacagcaa
    14221 agtggcaccc agcgccgcag cgactttacc gatgcccgat ttcagaagcg caacctcggt
    14281 tccattcagt tggccggtat agatttcgca accgccgaga ctgatagttt gacggttttc
    14341 gattttgtca cgcagcagcg taacttcttc ttccattgca ccaatgatgc cgattttcat
    14401 agatttactc gcgataagcc cgatttgaag gcatagttta ccatgcgctt acggggaagc
    14461 gtatttctca cgcgggagag gacatggcac agattgattt ccgaaaaaaa ataaactggc
    14521 atcgtcgtta ccgttcaccg cagggcgtta aaaccgaaca tgagatcctg cggatcttcg
    14581 agagcgatcg cgggcgtatc atcaactctc cggcaattcg tcgtctgcaa caaaagaccc
    14641 aggtttttcc actggagcgc aatgccgccg tgcgcacgcg tcttacccac tcgatggaag
    14701 tccagcaggt ggggcgctac atcgccaaag aaattttaag ccgtctgaaa gagcttaaat
    14761 tgctggaagc atacggcctg gatgaactga ccggaccttt tgaaagcatt gttgagatgt
    14821 catgcctgat gcacgatatc ggcaatccgc cgtttggtca ttttggcgaa gcagcgataa
    14881 atgactggtt tcgccaacgt ttgcacccgg aagatgccga aagccagcct ctgactgacg
    14941 atcgctgcag cgtggcggca ctacgtttac gggacgggga agaaccgctt aacgagctgc
    15001 ggcgcaagat tcgtcaggac ttatgtcatt ttgaggggaa tgcacaaggc attcgtctgg
    15061 tgcatacatt gatgcggatg aatctcacct gggcacaggt tggcggtatt ttaaaatata
    15121 cccgtccggc gtggtggcgt ggcgaaacgc ctgagacaca tcactattta atgaaaaagc
    15181 cgggttatta tctttctgaa gaagcctata ttgcccggtt gcgtaaagaa cttaatttgg
    15241 cgctttacag tcgttttcca ttaacttgga ttatggaagc tgccgacgac atctcctatt
    15301 gtgtggcaga ccttgaagat gcggtagaga aaagaatatt taccgttgag cagctttatc
    15361 atcatttgca cgaagcgtgg ggccagcatg agaaaggttc gctcttttcg ctggtggttg
    15421 aaaatgcctg ggaaaaatca cgctcaaata gtttaagccg cagtacggaa gatcagtttt
    15481 ttatgtattt acgggtaaac accctaaata aactggtacc ctacgcggca caacgattta
    15541 ttgataatct gcctgcgatt ttcgccggaa cgtttaatca tgcattattg gaagatgcca
    15601 gcgaatgcag cgatcttctt aagctatata aaaatgtcgc tgtaaaacat gtgtttagcc
    15661 atccagatgt cgagcagctt gaattgcagg gctatcgggt cattagcgga ttattagaga
    15721 tttatcgtcc tttattaagc ctgtcgttat cagactttac tgaactggta gaaaaagaac
    15781 gggtgaaacg tttccctatt gaatcgcgct tattccacaa actctcgacg cgccatcggc
    15841 tggcctatgt cgaggctgtc agtaaattac cgtcagattc tcctgagttt ccgctatggg
    15901 aatattatta ccgttgccgc ctgctgcagg attatatcag cggtatgacc gacctctatg
    15961 cgtgggatga ataccgacgt ctgatggccg tagaacaata accaggcttt tgtaaagacg
    16021 aacaataaat ttttaccttt tgcagaaact ttagttcgga acttcgcgct ataaaacgaa
    16081 tctgaagaac acagcaattt tgcgttatct gttaatcgag actgaaatac atgaaaaaaa
    16141 ccacattagc actgagtgca ctggctctga gtttaggttt ggcgttatct ccgctctctg
    16201 caacggcggc tgagacttct tcagcaacga cagcccagca gatgccaagc cttgcaccga
    16261 tgctcgaaaa ggtgatgcct tcagtggtca gcattaacgt agaaggtagc acaaccgtta
    16321 atacgccgcg tatgccgcgt aatttccagc agttcttcgg tgatgattct ccgttctgcc
    16381 aggaaggttc accgttccag agctctccgt tctgccaggg gggccagggc ggtaatggcg
    16441 gcggccagca acagaaattc atggcgctgg gttccggcgt catcattgat gccgataaag
    16501 gctatgtcgt caccaacaac cacgttgttg ataacgcgac ggtgattaaa gtccagctga
    16561 gcgatggtcg taagttcgac gcgaagatgg ttggcaaaga tccgcgctct gatatcgcgc
    16621 tgattcagat ccagaacccg aaaaacctga ccgcaattaa gatggcggat tctgatgcac
    16681 tgcgcgtggg tgattacacc gtagcgattg gtaacccgtt tggcctggga gagacggtaa
    16741 cttccgggat tgtctctgcg ctggggcgta gcggcctgaa tgccgaaaac tacgaaaact
    16801 tcatccagac cgatgcagcg atcaaccgtg gtaactccgg tggtgcgctg gttaacctga
    16861 acggcgaact gatcggtatc aacaccgcga tcctcgcacc ggacggcggc aacatcggta
    16921 tcggttttgc tatcccgagc aacatggtga aaaacctgac ctcgcagatg gtggaatacg
    16981 gccaggtgaa acgcggtgag ctgggtatta tggggactga gctgaattcc gaactggcga
    17041 aagcgatgaa agttgacgcc cagcgcggtg ctttcgtaag ccaggttctg cctaattcct
    17101 ccgctgcaaa agcgggcatt aaagcgggtg atgtgatcac ctcactgaac ggtaagccaa
    17161 tcagcagctt tgccgcactg cgtgctcagg tgggtactat gccggtgggc agcaaactga
    17221 ccctgggctt gctgcgcgac ggtaagcagg tcaacgtgaa tctggaactg cagcagagca
    17281 gccagaatca ggttgattcc agctccatct tcaacggcat tgaaggcgct gagatgagca
    17341 acaaaggcaa agatcagggc gtggtagtga acaacgtgaa aacgggcact ccggctgcgc
    17401 agatcggcct gaagaaaggt gatgtgatta ttggcgcgaa ccagcaggca gtgaaaaaca
    17461 tcgctgaact gcgtaaagtt cttgacagca aaccgtctgt actggcactg aacattcagc
    17521 gcggcgacag ctccatctac ctgttaatgc agtaatctcc ctcaacccct tcctgaaaac
    17581 gggaaggggt tctccttaca atctgtgaac ttcaccacaa ctccatacat cttcatcatc
    17641 ctttaggcat ttgcacaatg ccgtacgtta cgtacttcct tatgctaagc cgtgcataac
    17701 ggaggactta tggctggctg gcatcttgat accaaaatgg cgcaggatat cgtggcacgt
    17761 accatgcgca tcatcgatac caatatcaac gtaatggatg cccgtgggcg aattatcggc
    17821 agcggcgatc gtgagcgtat tggtgaattg cacgaaggtg cattgctggt actttcacag
    17881 ggacgagtcg tcgatatcga tgacgcggtg gcacgtcatc tgcacggtgt gcggcagggg
    17941 attaatctac cgttacggct ggaaggtgaa attgtcggcg taattggcct gacaggtgaa
    18001 ccagagaatc tgcgtaaata tggcgaactg gtctgcatga cggctgaaat gatgctggaa
    18061 cagtcgcggt tgatgcacct gttggcgcag gatagccgtt tgcgggaaga actggtgatg
    18121 aacctgattc aggctgagga gaatactccc gcacttactg aatgggcgca acggctgggg
    18181 atcgatctca atcaaccgcg agtagtggct attgttgagg tcgacagcgg tcagcttggc
    18241 gtggacagcg caatggcgga gttacaacaa ctgcaaaatg cgctgactac gcccgagcgt
    18301 aataatctgg tggcgattgt ctcgctgacc gaaatggtgg tgttgaaacc ggcgttgaac
    18361 tcttttgggc gctgggatgc agaagatcat cgtaagcgag ttgaacaact gattacccgc
    18421 atgaaagagt atggccagct gcgttttcgc gtttcgctgg gcaactattt taccggtcct
    18481 ggcagtattg cccgatccta tcgtacggcg aaaacgacga tggtggtggg taaacagcgg
    18541 atgccagaaa gtcgctgcta tttttatcag gatctgatgt tacctgtgtt actcgacagt
    18601 ttgcgtggcg actggcaggc caatgaactg gcgcgaccgc tggcgcggct gaaagcgatg
    18661 gacaataatg gcttgctgcg acgaacgctg gcggcgtggt ttcgccacaa tgtgcaaccg
    18721 ctggctacgt caaaggcgct gtttattcat cgtaatactc tggagtatcg gcttaatcgt
    18781 atatcggaac tgaccgggct tgatttgggt aattttgatg acaggttgct gctgtatgtg
    18841 gcgttgcagc tggatgaaga gcggtaggtt atgcgttaag gtcgaggcgg cgctggctca
    18901 ttcccctcag cccgaagggt agaggggaat gtccgagtta accgtcagtt cggcattatt
    18961 tacgcgttag tttttccaga tcggcttcaa tctcgctgat cttattggtt acgactgact
    19021 ccaggtgacg taagtcgtcg aggatcttac gcttaagatc aacttcgctg cggtcacgct
    19081 ggcagatttg atcaagctca tcaatgatat accgtagatt cgggctgatt tcctggactt
    19141 ctttataacc ctgacccaca ccatcagcga cgaccgtttt acgctgacgc ggatatttaa
    19201 acttaacgct cttggcgaaa aactcgcctt tgtctttctg gaaatagatt ttcagaatat
    19261 cgttgttggc ttcctgccgg aggctgtaac gatcaatttc ttcaggattg gtaataccca
    19321 gacttttcag attgtcgtac atagcgttac ctcaaaatga gtcagtaaat tgtgcttatt
    19381 ttagcatttg gcctggcccg cccggctcga ctgtgatcgc agaaagcctt tttcttccag
    19441 acttctatca tggcgtaaaa atcaaaaaat tacctgcttt attgtggcga tattccatgg
    19501 gatggattaa cacatttatc ttcgttttgc gaattacatg acagtccgaa acaagatgaa
    19561 aaagtattta aaaaaggggg gaagaagaat gagtaggacg aattattctg agccagaaag
    19621 catacgggca gcatcatgct gcccgtatat gtactcttaa tcgatggtac gcagcagttc
    19681 gttaatgccg actttgccgc gagttttcgc gtcaactttc ttaacgataa ccgcacagta
    19741 gaggctgtat ttgccatctt tcgacggcag attacctgaa acaaccacag accccgccgg
    19801 aacgcgaccg tagtggattt cgccggtttc acggtcgtaa atacgggtgc tctgaccaat
    19861 gtatacgccc atagagatga cggaaccttc ttcgacaatc accccttcaa ccacttcgga
    19921 gcgtgcgcca atgaagcagt tatcttcaat aatggtcggg ttagcctgca gcggctccag
    19981 cacgccgccg atgcccacgc caccggaaag gtggacgttt ttaccaatct gcgcacaaga
    20041 accgacggtc gcccaggtat caaccatcgt gccttcatca acatatgcgc cgatgttgac
    20101 gtaagacggc atcagcacgg tgttacgggc aataaatgca ccctgacgta ccgccgctgg
    20161 tggcacaacg cggaagcctt ctttctgaaa acgcgcttcg tcgtagtcgg cgaatttcat
    20221 cggcacttta tcgaagtagc ggctttctgc cccttcgatc acctgattat cattaatacg
    20281 gaaagagagc agcaccgctt ttttcaacca ctgatgcgtc acccactgac cgtcaatttt
    20341 ttccgctaca cgcagtgcgc cggaatccag cagggcgatc acctgattta ccgcttcgcg
    20401 ggttacggtg tctgcattgg ctggcgtgat ctcggcacgg cgttcaaaag cggtttcaat
    20461 aatgttctgt aactgctgca ttgttaaact cttttcatat cagtaaacac atcacccttt
    20521 atcgtttgga ttgagggcct ctgtcaaccg ctgatgcact tcctgctgca actcgttatt
    20581 aagtgcacgc cggtcagcgg tggcaattat gaataaatct tctactcgct cgccaatggt
    20641 tgtaattcgg gcaccatgaa gcgaaattcc cagatcggca aaaattttcc cgactctcgc
    20701 cagcagtcct ggctggtcga gcgcgataag ctcaaggaac gatttgcggt cggtatgggt
    20761 cggcaaaaac gttacttcgg tttcaacagt aaaatggcgt aatttggcgg gttggcgacg
    20821 gggctgcggt ggctgccagc tactttgcgt cagtacttgc tccagaccaa accgaataac
    20881 ctcatgacga tctgcggaca gcgggctgcc atcgggttcc agcacgataa aggtatccat
    20941 cgccataccg tcgcgagtgg tgaaaatttg tgcgtcgtga acacttaaat tgcggcggtc
    21001 taattcggca cagacggcgg caaacagata ggggcggtcc gggctccaga taaaaatctc
    21061 ggtgcctcca cgcgtagcct gcgggctaag caataccagc ggtttgctta aatcatgctg
    21121 taataaatgg cgggcatgcc aggccagttg atttgggcta tggcggacaa aatagttagc
    21181 acgacagcgt gaccaaattt ggtgcagcgc ctcttcgtcg atgttatcca tgcgcagtag
    21241 tgccagtgcc tggagttggt gatggcgaac ccgttcgcgc atatccggcg tgttttgcat
    21301 tccgcgtcgt agctgctttt cggtggcaaa atagagttcg cgcaacagac tttgcttcca
    21361 gctattccac agcgtttcgt tggtggcgca aatgtcagcc actgtcaggc ataccagata
    21421 gcgcagacga ttttccgttt gaacttcttc ggcaaactgc ttgatgactt cagggtcctg
    21481 aatatcgcgg cgttgtgctg tcaccgacat cagcaagtgc tggcgaacca gccaggcaac
    21541 cagctgtgtt tcgcgtgagt tcagcccgtg gagttctgca aaatgcacta catcctgagc
    21601 accgagaatg gagtggtcgc cgccgcgtcc tttggcgata tcgtgaaaca gcgcggcgat
    21661 gaaaatcagc tcagttgacg gcaggcgcgg ccagacgtcc acacacaacg gatggcgctg
    21721 gcgcgtttct tcactggcaa aactctccag tttcagcatc acgcggatag tatgttcatc
    21781 caccgtgtag gcgtggaaca gatcaaactg catctgcccg acgatatgcg accattgcgg
    21841 catatacgcg ccgagcacgc tatggcgatg cattggcaat agcccgcgcc gcaccgctcc
    21901 ggggtgacgc agaatgctca aaaacagttt tcgtgcttcc ggaatattac acagcggttg
    21961 ttgcagatgg cgacgggcat ggcgtaactg gcgcagcgtg gtggagtaaa tgccggtgat
    22021 cgcactgttg cgcaccatgg tgtagaacat acgcaagatg gcttccggct ggcgcataaa
    22081 tagtgtttca tcacgcaggt cgattagcgt accgcgtagc tgaaactcat cgtcgattgg
    22141 acgtggtttt tcgtcggcgg gaagggcgag gatggcttca tcgaacagtt gcagcagcat
    22201 ctggttgagt tcactgacgc ggcgtgtaac gcggaagtaa tccttcatca tccgctcgac
    22261 cggttcgttg ccttcaccac tgtaattcag acgctgagcg acgctaagtt ggcgatcgaa
    22321 taacagacga ttatcgtaac ggctgacgac cagatgcagg gcaaagcgaa tacgccacag
    22381 tatatgcaga cattcgttta attccgcccg ctccgctgag gttaagaagc caaacccgac
    22441 catttcatcc agcgatgttg cgccaaaatg acggcgggcc acccattgca gagtgtgaat
    22501 atcgcgcaag ccgccagggc tacttttgat gtctggttca aggttgtagc tggtgccatg
    22561 gtaacgctga tggcgctggt tctgttcttc aactttcgcc gcgtagaact tgtcggaagg
    22621 ccagaatcct tcgctaaaaa tatgtttttg cagttcgagg aagagcgcaa catcgccaat
    22681 taataagcgg gattcgatta aattggtggc gacggttaaa tccgataacc cttccagcat
    22741 gcactcttca agcgtgcgca cactatgacc gacttccagc tttacatccc agagcagcgt
    22801 taacagctcg cccacttttt gcgcctgatc gtccgggagc tttttacggc ttaaaatcag
    22861 taaatcgatg tcagaaagtg gatgcagctc gccacgaccg tagccaccga cggcgaccaa
    22921 tgccaggtcg gcaatctggc tgaatcccgc ttcaatccat aatcgttgca ggagctggtc
    22981 gataaactcg gtgcgcgcct caatcaactg ttctgcagag atcccattgt caaaggcatc
    23041 acccagccaa cgctggaaag tatcgatatg ggcttttatc ccaccgacgg ttaattcatc
    23101 acggggccag acgcatggat tttgcggttg accgggcagg gtggggagag cggtgtttgc
    23161 gtactgttct ggaagggtat tcattgtgcg ccacccataa gattaaatta tcgcattaaa
    23221 aaagccggca ttcgccggct tcatcttatt cgtcgtgcga gattatcgcc gggatggtgt
    23281 catccttgcg tagcgtcaaa atttcgcagc cgttatcagt caccacaata gtatgctcat
    23341 attgtgcaga caagctgcga tctttggttt ttaccgtcca gccatctttc atggtgcgga
    23401 tctctttttt acccgcgttg accattggct caatggtgaa cgtcatcccc ggtttcagca
    23461 cgacgttggt ttcacgggag tcatagtgca gcacctgcgg ttcttcatgg aagccgcgac
    23521 caataccgtg tccacaatat tcacgaacga cggagaagcc ttctgcttcg acaaacttct
    23581 gaatcgccgc accgatttcg cgcaggttaa tgcctggttt gaccatgcgc agcgccaggt
    23641 acaggctttc ttgcgtgatg cggcacagac gttcgcccat gatggtcggc ttaccgacga
    23701 taaacatttt cgaggtatcg ccgtggaaac catctttgat tacggtgaca tcaatgttaa
    23761 cgatatcgcc atctttcagc agcttagcat cgtccgggat accgtggcac accacttcat
    23821 taatagagat gcaaacggat ttcggatagc cgtgatagcc gaggcaggca gaaaccgcgt
    23881 gttgttcatt aacaatgtaa tcattacaga tgcgatccag ctcgccggtg ctgacgcccg
    23941 gtttaacata cggttcgatc atctccagca cttcggcagc cagtcggcca gcgacgcgca
    24001 ttttttcgat atcttctggg gtcttgattg agatagccat taattctgtc catcagcgtc
    24061 ggtgataccg acaatatata tgtaagtgcc gtcaatggta tcacacccgg gcaaattgag
    24121 aatcattctg aatttcgcca aacgtgccac tgaaggtttt ctataataga aaattcgaca
    24181 tctgatgctg tacacagcgc caacaattat tggtgtccat gacgtatttg tggtataaag
    24241 cgcgccggac ttccgatcca tttcgtatac acagactgga cggaagcgac aatctcactt
    24301 tgtgtaacaa cacacacgta tcggcacata ttccggggtg ccctttgggg tcggtaatat
    24361 gggatacgtg gaggcataac cccaactttt atatagaggt tttaatcatg gcaactgttt
    24421 ccatgcgcga catgctcaag gctggtgttc acttcggtca ccagacccgt tactggaacc
    24481 cgaaaatgaa gccgttcatc ttcggtgcgc gtaacaaagt tcacatcatc aaccttgaga
    24541 aaactgtacc gatgttcaac gaagctctgg ctgaactgaa caagattgct tctcgcaaag
    24601 gtaaaatcct tttcgttggt actaaacgcg ctgcaagcga agcggtgaaa gacgctgctc
    24661 tgagctgcga ccagttcttc gtgaaccatc gctggctggg cggtatgctg actaactgga
    24721 aaaccgttcg tcagtccatc aaacgtctga aagacctgga aactcagtcg caggacggta
    24781 ctttcgaaaa gctgaccaag aaagaagcgc tgatgcgcac tcgtgagctg gagaaactgg
    24841 aaaacagcct gggcggtatc aaagacatgg gcggtctgcc ggacgctctg tttgtaatcg
    24901 atgctgacca cgaacacatt gctatcaaag aagcaaacaa cctgggtatt ccggtatttg
    24961 ctatcgttga taccaactct gatccggacg gtgttgactt cgttatcccg ggtaacgacg
    25021 acgcaatccg tgctgtgacc ctgtacctgg gcgctgttgc tgcaaccgta cgtgaaggcc
    25081 gttctcagga tctggcttcc caggcggaag aaagcttcgt agaagctgag taataaggct
    25141 tgataactcc cccaaaatag ttcgagttgc agaaaggcgg caagctcgag aattcccggg
    25201 agcttacatc agtaagtgac cgggatgagc gagcgaagat aacgcatctg cggcgcgaaa
    25261 tatgaagggg gagagccctt atagaccagg tagtacacgt ttggttaggg ggcctgcata
    25321 tggccccctt tttcactttt atatctgtgc ggtttaatgc cgggcagatc acatctccga
    25381 ggattttaga atggctgaaa ttaccgcatc cctggtaaaa gagctgcgtg agcgtactgg
    25441 cgcaggcatg atggattgca aaaaagcact gactgaagct aacggcgaca tcgagctggc
    25501 aatcgaaaac atgcgtaagt ccggtgctat taaagcagcg aaaaaagcag gcaacgttgc
    25561 tgctgacggc gtgatcaaaa ccaaaatcga cggcaactac ggcatcattc tggaagttaa
    25621 ctgccagact gacttcgttg caaaagacgc tggtttccag gcgttcgcag acaaagttct
    25681 ggacgcagct gttgctggca aaatcactga cgttgaagtt ctgaaagcac agttcgaaga
    25741 agaacgtgtt gcgctggtag cgaaaattgg tgaaaacatc aacattcgcc gcgttgctgc
    25801 gctggaaggc gacgttctgg gttcttatca gcacggtgcg cgtatcggcg ttctggttgc
    25861 tgctaaaggc gctgacgaag agctggttaa acacatcgct atgcacgttg ctgcaagcaa
    25921 gccagaattc atcaaaccag aagacgtatc cgctgaagtg gtagaaaaag aataccaggt
    25981 acagctggat atcgcgatgc agtctggtaa gccgaaagaa atcgcagaga aaatggttga
    26041 aggccgcatg aagaaattca ccggcgaagt ttctctgacc ggtcagccgt tcgttatgga
    26101 accaagcaaa actgttggtc agctgctgaa agagcataac gctgaagtga ctggcttcat
    26161 ccgcttcgaa gtgggtgaag gcatcgagaa agttgagact gactttgcag cagaagttgc
    26221 tgcgatgtcc aagcagtctt aattatcaaa aaggagccgc ctgagggcgg cttctttttg
    26281 tgcccatctt gtaaattcag ctaacccttg tggggctgcg ctgaaaagcg acgtacaatg
    26341 tcgctagtat taattcattt caatcgttga cagtctcagg aaagaaacat ggctaccaat
    26401 gcaaaacccg tctataaacg cattctgctt aagctgagtg gcgaagctct gcagggcact
    26461 gaaggcttcg gtattgatgc aagcatactg gatcgtatgg ctcaggaaat caaagaactg
    26521 gttgaactgg gtattcaggt tggtgtggtg attggtgggg gtaacctgtt ccgtggcgct
    26581 ggtctggcga aagcgggtat gaaccgcgtt gtgggcgacc acatggggat gctggcgacc
    26641 gtaatgaacg gcctggcaat gcgtgatgca ctgcaccgcg cctatgtgaa cgctcgtctg
    26701 atgtccgcta ttccattgaa tggcgtgtgc gacagctaca gctgggcaga agctatcagc
    26761 ctgttgcgca acaaccgtgt ggtgatcctc tccgccggta caggtaaccc gttctttacc
    26821 accgactcag cagcttgcct gcgtggtatc gaaattgaag ccgatgtggt gctgaaagca
    26881 accaaagttg acggcgtgtt tactgctgat ccggcgaaag atccaactgc aaccatgtac
    26941 gagcaactga cttacagcga agtgctggaa aaagagctga aagtcatgga cctggcggcc
    27001 ttcacgctgg ctcgtgacca taaattaccg attcgtgttt tcaacatgaa caaaccgggt
    27061 gcgctgcgcc gtgtggtaat gggtgaaaaa gaagggactt taatcacgga ataattcccg
    27121 tgatggataa ataagggtaa gattccgcat aagtatcgcg ggggcgtaag tctggttata
    27181 aggcgttatt gttgcaggca gtttggtcac ggccagcgcg cagcaaccgg tgcgtacaca
    27241 agtacgtgag gatggcgagc actacccggg gccaaaatgg caaataaaat agcctaataa
    27301 tccagacgat tacccgtaat atgtttaatc agggctatac ttagcacact tccactgtgt
    27361 gtgactgtct ggtctgactg agacaagttt tcaaggattc gtaacgtgat tagcgatatc
    27421 agaaaagatg ctgaagtacg catggacaaa tgcgtagaag cgttcaaaac ccaaatcagc
    27481 aaaatacgca cgggtcgtgc ttctcccagc ctgctggatg gcattgtcgt ggaatattac
    27541 ggcacgccga cgccgctgcg tcagctggca agcgtaacgg tagaagattc ccgtactctg
    27601 aaaatcaacg tgtttgatcg ttcaatgtct ccggccgttg aaaaagcgat tatggcgtcc
    27661 gatcttggcc tgaacccgaa ctctgcgggt agcgacatcc gtgttccgct gccgccgctg
    27721 acggaagaac gtcgtaaaga tctgaccaaa atcgttcgtg gtgaagcaga acaagcgcgt
    27781 gttgcagtac gtaacgtgcg tcgtgacgcg aacgacaaag tgaaagcact gttgaaagat
    27841 aaagagatca gcgaagacga cgatcgccgt tctcaggacg atgtacagaa actgactgat
    27901 gctgcaatca agaaaattga agcggcgctg gcagacaaag aagcagaact gatgcagttc
    27961 tgatttcttg aacgacaaaa acgccgctca gtagatcctt gcggatcggc tggcggcgtt
    28021 ttgcttttta ttctgtctca actctggatg tttcatgaag caactcacca ttctgggctc
    28081 gaccggctcg attggttgca gcacgctgga cgtggtgcgc cataatcccg aacacttccg
    28141 cgtagttgcg ctggtggcag gcaaaaatgt cactcgcatg gtagaacagt gcctggaatt
    28201 ctctccccgc tatgccgtaa tggacgatga agcgagtgcg aaacttctta aaacgatgct
    28261 acagcaacag ggtagccgca ccgaagtctt aagtgggcaa caagccgctt gcgatatggc
    28321 agcgcttgag gatgttgatc aggtgatggc agccattgtt ggcgctgctg ggctgttacc
    28381 tacgcttgct gcgatccgcg cgggtaaaac cattttgctg gccaataaag aatcactggt
    28441 tacctgcgga cgtctgttta tggacgccgt aaagcagagc aaagcgcaat tgttaccggt
    28501 cgatagcgaa cataacgcca tttttcagag tttaccgcaa cctatccagc ataatctggg
    28561 atacgctgac cttgagcaaa atggcgtggt gtccatttta cttaccgggt ctggtggccc
    28621 tttccgtgag acgccattgc gcgatttggc aacaatgacg ccggatcaag cctgccgtca
    28681 tccgaactgg tcgatggggc gtaaaatttc tgtcgattcg gctaccatga tgaacaaagg
    28741 tctggaatac attgaagcgc gttggctgtt taacgccagc gccagccaga tggaagtgct
    28801 gattcacccg cagtcagtga ttcactcaat ggtgcgctat caggacggca gtgttctggc
    28861 gcagctgggg gaaccggata tgcgtacgcc aattgcccac accatggcat ggccgaatcg
    28921 cgtgaactct ggcgtgaagc cgctcgattt ttgcaaacta agtgcgttga catttgccgc
    28981 accggattat gatcgttatc catgcctgaa actggcgatg gaggcgttcg aacaaggtca
    29041 ggcagcgacg acagcattga atgccgcaaa cgaaatcacc gttgctgctt ttcttgcgca
    29101 acaaatccgc tttacggata tcgctgcgtt gaatttatcg gtactggaaa aaatggatat
    29161 gcgcgaacca caatgtgtgg acgatgtgtt atctgttgat gcgaacgcgc gtgaagtcgc
    29221 cagaaaagag gtgatgcgtc tcgcaagctg aggataatcc ggctacagag agtcgcgcta
    29281 tttgttagcg tagggcttca gtgatatagt ctgcgccatc tgatcgtaag tagttggctt
    29341 tataaggtca ggtatgccgt ggttttacac ggcttttttt tgtataggct tcagtattcc
    29401 tgagtaccgt aaaccctgtc agggaataaa aaacgcgtga tgttgtctgc tactcaacca
    29461 cttagcgaaa aattgccagc gcatggctgc cgtcatgttg cgatcattat ggacggcaat
    29521 ggtcgctggg caaaaaagca agggaagatt cgtgcctttg ggcataaagc cggggcaaaa
    29581 tccgtccgcc gggctgtctc ttttgcggcc aacaacggta ttgaggcgtt aacgctgtat
    29641 gcctttagta gtgaaaactg gaaccgacca gcgcaggaag tcagtgcgtt aatggaactg
    29701 tttgtgtggg cgctcgatag cgaagtaaaa agtctgcacc gacataacgt gcgtctgcgt
    29761 attattggcg ataccagtcg ctttaactcg cgtttgcaag aacgtattcg taaatctgaa
    29821 gcgctaacag ccgggaatac cggtctgacg ctgaatattg cggcgaacta cggtggacgt
    29881 tgggatatag tccagggagt caggcaactg gctgaaaagg tgcagcaagg aaacctgcaa
    29941 ccagatcaga tagatgaaga gatgctaaac cagcatgtct gtatgcatga actggcccct
    30001 gtagatttag taattaggac tgggggggag catcgcatta gtaacttttt gctttggcaa
    30061 attgcctatg ccgaacttta ctttacagat gttctctggc ccgatttcga tgaacaagac
    30121 tttgaagggg cgttaaatgc ctttgctaat cgagagcgtc gtttcggcgg caccgagccc
    30181 ggtgatgaaa cagcctgatg ggggtcgctt ttgctgaagt atcgcctgat atctgctttt
    30241 gtgttaatac ccgtcgtcat cgcggcgttg tttctgttgc cgccggtggg gttcgccatc
    30301 gtaacgctgg tggtctgcat gctggcagcg tgggaatggg gacagcttag cggttttacc
    30361 actcgttcgc agcgagtatg gttggcggtg ttatgcgggt tattgttggc gctgatgctt
    30421 tttctgttgc cggaatatca ccgaaatatt catcaaccgc tggttgaaat ctcactttgg
    30481 gcttcgctgg gttggtggat tgtcgcgcta ttgctggtgc tgttttaccc aggttccgca
    30541 gcaatctggc gtaactctaa aacattgcgc cttatttttg gcgtgctaac cattgttccc
    30601 ttcttctggg gcatgctggc gttacgggcc tggcactatg acgagaatca ttacagtggc
    30661 gcaatatggc tgctctatgt catgatcctg gtatggggcg ctgactccgg cgcatatatg
    30721 tttggcaaat tgtttggtaa acataagctg gcaccgaagg tttctccggg taaaacctgg
    30781 caaggcttta taggtggact agcgaccgca gcggtaatct catggggtta tggcatgtgg
    30841 gcgaatctcg acgtcgctcc cgtcacctta ctcatttgct ctattgtcgc agcgttagcc
    30901 tcagtgctcg gcgatctgac cgagagtatg tttaagcgtg aagcaggaat taaggacagc
    30961 ggtcatttaa ttccaggaca cggtggtatt ttagatcgta ttgatagcct gacggctgcg
    31021 gtaccggtct ttgcttgctt gttgttactg gtattcagga cgctttaacg gaaggtaata
    31081 tgctgagttt tctctgggat ttggcttcgt tcatcgttgc actgggtgta cttatcaccg
    31141 tgcatgaatt tggtcatttc tgggttgccc ggcgttgtgg tgttcgcgtt gagcgtttct
    31201 caatagggtt tggtaaggcg ctctggcggc gaactgataa gctcggcacc gaatatgtta
    31261 tcgccctgat cccgctgggc ggttatgtca aaatgctgga tgagcgcgca gaaccggtcg
    31321 ttccggaact ccgccaccat gccttcaata ataaatctgt tggccaacga gcggcgatta
    31381 ttgccgcagg tccggttgca aacttcattt ttgctatctt agcctactgg ctggttttta
    31441 ttattggtgt gcctggcgta cgtccggtgg ttggtgaaat agcagccaat tcgatagctg
    31501 cggaagcaca aattgcacca ggtacggaac taaaagccgt agatggtatc gaaacgcctg
    31561 attgggatgc cgtgcgtttg cagttggtcg ataaaattgg cgatgaaagc accaccatta
    31621 cagtagcgcc atttggcagc gaccaacggc gggatgtaaa gctcgattta cgtcactggg
    31681 cgtttgagcc tgataaagaa gatccggtat cttcgctggg gattcgtcct cgtgggccgc
    31741 aaattgaacc tgtactggaa aatgtgcagc caaactcggc ggcaagcaag gcaggtttgc
    31801 aagcaggcga caggatcgtt aaagtcgatg gtcagccctt aacgcagtgg gtgacctttg
    31861 tgatgcttgt ccgggataac ccgggtaaat ccttagcgtt agaaatcgaa aggcagggga
    31921 gtcccttgtc tttgacatta atcccggaga gtaaaccggg taatggtaaa gcgattggtt
    31981 ttgtcggtat tgagccgaaa gtcattcctt tgccagatga gtataaagtt gtacgccagt
    32041 atgggccgtt caacgccatc gtcgaagcca cggacaaaac gtggcagctg atgaagctga
    32101 cggtcagtat gctgggaaaa ttgatcaccg gtgatgtgaa actgaacaac ctcagtgggc
    32161 cgatctctat cgccaagggg gctgggatga cagcggaact cggggtagtt tattacctgc
    32221 cgtttcttgc gcttattagc gtgaacttag ggataattaa cctgtttccg ttgcccgtac
    32281 ttgacggggg gcatctgctg ttccttgcga tcgaaaagat caagggcgga ccggtatccg
    32341 agcgggttca agacttttgt tatcgcattg gctcgattct gctggtgctg ttaatggggc
    32401 ttgcactttt caatgatttc tctcggttat gagagttagt taggaagaac gcataataac
    32461 gatggcgatg aaaaagttgc tcatagcgtc gctgctgttt agcagcgcca ccgtatacgg
    32521 tgctgaaggg ttcgtagtga aagatattca tttcgaaggc cttcagcgtg tcgccgttgg
    32581 tgcggccctc ctcagtatgc cggtgcgcac aggcgacacg gttaatgatg aagatatcag
    32641 taataccatt cgcgctctgt ttgctaccgg caactttgag gatgttcgcg tccttcgtga
    32701 tggtgatacc cttctggttc aggtaaaaga acgtccgacc attgccagca ttactttctc
    32761 cggtaacaaa tcggtgaaag atgacatgct gaagcaaaac ctcgaggctt ctggtgtgcg
    32821 tgtgggcgaa tccctcgatc gcaccaccat tgccgatatc gagaaaggtc tggaagactt
    32881 ctactacagc gtcggtaaat atagcgccag cgttaaagct gtcgtgaccc cgctgccgcg
    32941 caaccgtgtt gacctaaaac tggtgttcca ggaaggtgtg tcagctgaaa tccagcaaat
    33001 taacattgtt ggtaaccatg ctttcaccac cgacgaactg atctctcatt tccaactgcg
    33061 tgacgaagtg ccgtggtgga acgtggtagg cgatcgtaaa taccagaaac agaaactggc
    33121 gggcgacctt gaaaccctgc gcagctacta tctggatcgc ggttatgccc gtttcaacat
    33181 cgactctacc caggtcagtc tgacgccaga taaaaaaggt atttacgtca cggtgaacat
    33241 caccgaaggc gatcagtaca agctttctgg cgttgaagtg agcggcaacc ttgccgggca
    33301 ctccgctgaa attgagcagc tgactaagat cgagccgggt gagctgtata acggcaccaa
    33361 agtgaccaag atggaagatg acatcaaaaa gcttctcggt cgctatggtt atgcctatcc
    33421 gcgcgtacag tcgatgcctg aaattaacga tgccgacaaa accgttaaat tacgcgtgaa
    33481 cgttgatgcg ggtaaccgtt tctacgtgcg taagatccgt tttgaaggta acgatacctc
    33541 gaaagatgcc gtcctgcgtc gcgaaatgcg tcagatggaa ggtgcatggc tgggaagcga
    33601 tctggtcgat cagggtaagg agcgtctgaa tcgtctgggc ttctttgaaa ctgtcgatac
    33661 cgatacccaa cgtgttccgg gtagcccgga ccaggtagat gtcgtctaca aggtaaaaga
    33721 gcgcaacacc ggtagcttca acttcgggat tggttacggt actgaaagtg gcgtgagctt
    33781 ccaggctggc gtgcaacagg ataactggtt aggtacaggt tatgctgttg gtatcaacgg
    33841 gaccaaaaac gattaccaga cctatgctga actgtcggta accaacccgt acttcaccgt
    33901 agatggcgta agcctcggtg gtcgtctctt ctataatgac ttccaggcag atgacgccga
    33961 cctgtccgac tataccaaca agagttatgg tacagacgtg acgttgggct tcccgatcaa
    34021 cgaatataac tcgctgcgtg caggtctggg ttatgtacat aactccctgt ccaacatgca
    34081 gccgcaggtt gcgatgtggc gttatctgta ctctatgggt gaacatccga gcacctctga
    34141 tcaggataat agcttcaaaa cggacgactt cacgttcaac tatggttgga cctataacaa
    34201 gcttgaccgt ggttacttcc cgacagatgg ttcacgtgtc aacctgaccg gtaaagtgac
    34261 cattcctgga tcggataacg aatactacaa agtgacgtta gacacggcga cttatgtgcc
    34321 gatcgatgac gatcacaaat gggttgttct ggggcgtacc cgctggggtt atggtgatgg
    34381 tttaggcggc aaagagatgc cgttctacga gaacttctat gccggtggtt ccagcaccgt
    34441 gcgtggcttc cagtccaata caattggtcc gaaagcagtt tacttcccgc atcaggccag
    34501 taattatgat ccggactatg attacgaatg tgcgactcag gacggcgcga aagacctgtg
    34561 taaatcggat gatgctgtag gcggtaacgc catggcggtt gccagcctcg agttcatcac
    34621 cccgacgccg tttattagcg ataagtatgc taactcggtt cgtacttcct tcttctggga
    34681 tatgggtacc gtttgggata caaactggga ttccagccaa tattctggat atccggacta
    34741 tagtgatcca agcaatatcc gtatgtctgc gggtatcgca ttacaatgga tgtccccatt
    34801 ggggccgttg gtgttctcct acgcccagcc gttcaaaaag tacgatggag acaaggcaga
    34861 acagttccag tttaacatcg gtaaaacctg gtaagtgttc tccacaaagg aatgtagtgg
    34921 tagtgtagcg atgactttag gcgatcaata taagatcgcc gggccacgca aagaactgca
    34981 ccctccggtg caaatgggat ggtaaggagt ttattgtgaa aaagtggtta ttagctgcag
    35041 gtctcggttt agcactggca acttctgctc aggcggctga caaaattgca atcgtcaaca
    35101 tgggcagcct gttccagcag gtagcgcaga aaaccggtgt ttctaacacg ctggaaaatg
    35161 agttcaaagg ccgtgccagc gaactgcagc gtatggaaac cgatctgcag gctaaaatga
    35221 aaaagctgca gtccatgaaa gcgggcagcg atcgcactaa gctggaaaaa gacgtgatgg
    35281 ctcagcgcca gacttttgct cagaaagcgc aggcttttga gcaggatcgc gcacgtcgtt
    35341 ccaacgaaga acgcggcaaa ctggttactc gtatccagac tgctgtgaaa tccgttgcca
    35401 acagccagga tatcgatctg gttgttgatg caaacgccgt tgcttacaac agcagcgatg
    35461 taaaagacat cactgccgac gtactgaaac aggttaaata agtaatgcct tcaattcgac
    35521 tggctgattt agcgcagcag ttggatgcag aactacacgg tgatggcgat atcgtcatca
    35581 ccggcgttgc gtccatgcaa tctgcacaaa caggtcacat tacgttcatg gttaacccaa
    35641 aataccgtga gcatttaggc ttgtgccagg cgtccgcggt tgtcatgacc caggacgatc
    35701 ttcctttcgc gaaaagtgcc gcgctggtag tgaagaatcc ctacctgact tacgcgcgca
    35761 tggcgcaaat tttagatacc acgccgcagc ccgcgcagaa cattgcaccc agtgcggtga
    35821 tcgacgcgac ggcgaagctg ggtaacaacg tatcgattgg cgctaacgcg gtgattgagt
    35881 ccggcgttga actgggcgat aacgtgatta tcggtgccgg ttgcttcgta ggtaaaaaca
    35941 gcaaaatcgg tgcaggttcg cgtctctggg cgaacgtaac catttaccat gagatccaga
    36001 tcggtcagaa ttgcctgatc cagtccggaa cagtggtagg cgcagacggc tttggttatg
    36061 ccaacgatcg tggtaactgg gtgaagatcc cacagattgg tcgcgtaatt attggcgatc
    36121 gcgtggagat cggtgcctgc acaaccatcg atcgcggcgc gctggatgac actattattg
    36181 gcaatggcgt gatcattgat aaccagtgcc agattgcaca taacgtcgtg attggcgaca
    36241 atacggcggt tgccggtggc gtcattatgg cgggcagcct gaaaattggt cgttactgca
    36301 tgatcggcgg agccagcgta atcaacgggc atatggaaat atgcgacaaa gtgacggtta
    36361 cgggcatggg tatggtgatg cgtcccatca ctgaaccagg cgtctattcc tcaggcattc
    36421 cgctgcaacc caacaaagtc tggcgcaaaa ccgctgcact ggtgatgaac attgatgaca
    36481 tgagcaagcg tctgaaatcg cttgagcgca aggttaatca acaagactaa cgttccatct
    36541 tttgttcgcc aaactttacg gcctgtctca ttcttacgat tgcggcaggc cgtgttatta
    36601 ttgtcgtttc ttatattttg acaggaagag tatcttgact actaacactc atactctgca
    36661 gattgaagag attttagaac ttctgccgca ccgtttccct ttcttactgg tggatcgcgt
    36721 gctggatttt gaagaaggtc gttttctgcg cgcagtaaaa aatgtctctg tcaatgagcc
    36781 attcttccag ggccatttcc ctggaaaacc gattttcccg ggtgtgctga ttctggaagc
    36841 aatggcacag gcaacaggta ttctggcgtt taaaagcgta ggaaaactgg aaccgggtga
    36901 gctgtactac ttcgctggta ttgacgaagc gcgcttcaag cgcccggtcg tgcctggcga
    36961 tcaaatgatc atggaagtca ctttcgaaaa aacgcgccgc ggcctgaccc gttttaaagg
    37021 ggttgctctg gtcgatggta aagtagtttg cgaagcaacg atgatgtgtg ctcgtagccg
    37081 ggaggcctga tacgtgattg ataaatccgc ctttgtgcat ccaaccgcca ttgtggaaga
    37141 gggcgcgtca attggcgcga acgcacacat tggtcctttt tgtatcgttg gaccccatgt
    37201 cgaaattggt gagggtaccg tactgaaatc tcacgttgtc gtgaatggtc atactaaaat
    37261 tggccgcgat aatgagattt atcagttcgc ctccatcggc gaagttaacc aggatctgaa
    37321 atatgctggc gaaccgaccc gtgtggaaat cggcgatcgt aaccgcattc gcgaaagcgt
    37381 caccattcat cgtggcacag tccagggcgg tggattgacg aaggtgggca gcgacaactt
    37441 actgatgatc aacgcgcaca ttgcgcacga ttgtacggta ggtaaccgct gtattctcgc
    37501 caacaacgca acgctggcgg gtcacgtatc ggttgacgac ttcgcgatca tcggcggcat
    37561 gaccgcagtc catcagttct gcatcattgg tgcgcacgtg atggttggcg gctgctccgg
    37621 tgtggcgcag gacgtccctc cttatgtcat tgcgcagggt aaccacgcaa cgccgttcgg
    37681 tgtcaatatc gaagggctga agcgccgcgg attcagccgt gaggcgatta ccgctatccg
    37741 caatgcgtat aagctgattt atcgtagcgg taaaacgctc gatgaagtga aaccggaaat
    37801 tgctgaactg gcggaaacat atccggaagt gaaagccttt accgatttct ttgcacgctc
    37861 aacgcgcggt ctgattcgtt aatgactgaa cagcgtccat taacgattgc cctggtcgcc
    37921 ggagaaacct ccggcgatat cctgggggcc ggtttaatcc gcgctctgaa agaacgtgtg
    37981 cccaacgccc gctttgttgg tgttgccggg ccacgaatgc aggctgaagg ctgcgaagcc
    38041 tggtacgaaa tggaagaact ggcggtgatg ggcattgttg aagtgctcgg tcgtctgcgt
    38101 cgcttactgc atattcgtgc cgatctgaca aagcgttttg gcgaactgaa gccagatatt
    38161 tttgttggta ttgatgcgcc tgacttcaat attactcttg aaggtaacct caaaaagcag
    38221 ggtatcaaaa ccattcatta cgtcagtcca tccgtctggg cgtggcgaca gaaacgcgtt
    38281 ttcaaaatag gcagagccac cgatctggtg ctcgcatttc tgcctttcga aaaagcgttt
    38341 tatgacaaat acaatgtacc gtgccgcttt atcggtcata ccatggctga tgccatgccg
    38401 ttagatccag ataaaaatgc cgcccgtgat gtgctgggga tccctcacga tgcccactgc
    38461 ctggcgttgc taccagggag ccgtggtgca gaagttgaaa tgcttagtgc cgatttcctg
    38521 aaaacggccc agcttttgcg ccagacatat ccggatctcg aaatcgtggt gccactggtg
    38581 aatgccaaac gccgcgagca gtttgaacgc atcaaagctg aagtcgcgcc agacctttca
    38641 gttcatttgc tggatgggat gggccgtgag gcgatggtcg ccagcgatgc ggcgctactg
    38701 gcgtcgggta cggcagccct ggagtgtatg ctggcgaaat gcccgatggt ggtgggatat
    38761 cgcatgaagc cttttacctt ctggttggcg aagcggctgg tgaaaactga ttatgtctcg
    38821 ctgccaaatc tgctggcggg tagagagtta gtcaaagaat tattgcagga agagtgtgag
    38881 ccgcaaaaac tggctgcggc gctgttaccg ctgttggcga acgggaaaac cagccacgcg
    38941 atgcacgata ccttccgtga actgcatcag cagatccgct gcaatgccga tgagcaggcg
    39001 gcacaagccg ttctggagtt agcacaatga tcgaatttgt ttatccgcac acgcagctgg
    39061 ttgcgggtgt ggatgaagtc ggacgcgggc cgttagttgg cgcggtcgtc accgctgcgg
    39121 tgatccttga cccggcgcgc ccgattgccg ggctgaatga ttccaaaaag ctgagcgaaa
    39181 aacgccgtct ggcgctctat gaagagatca aagagaaagc gttgagctgg agtctgggcc
    39241 gcgcggaacc ccacgaaatc gacgagctga acattcttca tgcgaccatg ctggcgatgc
    39301 agcgtgccgt cgctgggctg catattgcgc cggaatatgt gttgattgat ggtaaccgct
    39361 gcccgaaatt accgatgcct gcgatggctg tggtgaaagg cgatagccgc gtaccggaaa
    39421 tcagtgccgc gtctatcctg gcgaaagtga cgcgtgacgc cgaaatggcg gcgctggata
    39481 ttgttttccc gcaatatggt tttgcccaac acaaagggta cccaaccgct tttcatctgg
    39541 aaaaactggc tgaacacggc gcgaccgaac accatcggcg cagctttggg cctgtcaaac
    39601 gcgcactggg acttgcgtcc tgattcttgt gtcgagatta agtaaaccgg aatctgaaga
    39661 tgtctgaacc acgtttcgta cacctgcggg tgcacagcga ctactcgatg atcgatggcc
    39721 tggccaaaac cgcaccgttg gtaaaaaagg cggcggcgtt gggtatgcca gcactggcga
    39781 tcaccgattt caccaacctt tgtggtctgg tgaagttcta cggagcggga catggcgcag
    39841 ggattaagcc tatcgtcggg gcagatttta acgtccagtg cgacctgctg ggtgatgagt
    39901 taacccacct gacggtactg gcggcgaaca ataccggcta tcagaatctg acgttgctga
    39961 tctcaaaagc gtatcagcgc gggtacggtg ccgccgggcc gatcatcgat cgcgactggc
    40021 ttatcgaatt aaacgaaggg ttgatccttc tttccggcgg acgcatgggc gacgtcggac
    40081 gcagtctttt gcgtggtaac agcgcgctgg tagatgagtg tgtcgcgttt tatgaagaac
    40141 acttcccgga tcgctatttt ctcgagctga tccgcaccgg caggccggac gaagaaagct
    40201 atctgcacgc ggcggtggaa ctggcggaag cgcgcggttt gcccgtcgtg gcgaccaacg
    40261 acgtgcgctt tatcgacagc agcgactttg acgcacacga aatccgcgtc gcgatccacg
    40321 acggctttac cctcgacgat cctaaacgcc cgcgtaacta ttcgccgcag caatatatgc
    40381 gtagcgaaga ggagatgtgt gagctgtttg ccgacatccc cgaagccctt gccaacaccg
    40441 ttgagatcgc caaacgctgt aacgtaaccg tgcgtcttgg tgaatacttc ctgccgcagt
    40501 tcccgaccgg ggacatgagc accgaagatt atctggtcaa gcgtgcaaaa gagggcctgg
    40561 aagagcgtct ggccttttta ttccctgatg aggaagaacg tcttaagcgc cgcccggaat
    40621 atgacgaacg tctggagact gaacttcagg ttatcaacca gatgggcttc ccgggctact
    40681 tcctcatcgt tatggaattt atccagtggt cgaaagataa cggcgtaccg gtagggccag
    40741 gccgtggctc cggtgcgggt tcactggtgg cctacgcgct gaaaatcacc gacctcgatc
    40801 cgctggaatt tgacctgctg ttcgaacgtt tccttaaccc ggaacgtgtc tccatgcctg
    40861 acttcgacgt tgacttctgt atggagaaac gcgatcaggt tatcgaacac gtggcggaca
    40921 tgtacggtcg tgatgcggta tcgcagatca tcaccttcgg tacaatggcg gcgaaagcgg
    40981 tgatccgcga cgtaggccgc gtgctggggc atccgtacgg ctttgtcgat cgtatctcga
    41041 aactgatccc gcccgatccg gggatgacgc tggcgaaagc gtttgaagcc gagccgcagc
    41101 tgccggaaat ctacgaagcg gatgaagaag ttaaggcgct gatcgacatg gcgcgcaaac
    41161 tggaaggggt cacccgtaac gccggtaagc acgccggtgg ggtggttatc gcgccgacca
    41221 aaattaccga ttttgcgccg ctttactgcg atgaagaggg caaacatccg gtcacccagt
    41281 ttgataaaag cgacgttgaa tacgccggac tggtgaagtt cgacttcctt ggtttgcgta
    41341 cgctcaccat catcaactgg gcgctggaga tgatcaacaa gcggcgggcg aagaatggcg
    41401 agccgccgct ggatatcgcc gcgatcccgc tggatgacaa gaaaagcttc gacatgctgc
    41461 aacgctcgga aaccacggcg gtattccagc ttgaatcgcg cggcatgaag gacctgatca
    41521 agcgtctgca acctgactgc ttcgaagata tgatcgcact ggtggcgctg ttccgcccag
    41581 gtccgttgca atcagggatg gtggataact ttatcgaccg taaacatggt cgcgaagaaa
    41641 tctcctatcc ggacgtacag tggcagcatg aaagcctgaa accggtactg gagccaacct
    41701 acggcatcat cctgtatcag gaacaggtca tgcagattgc gcaggtgctt tctggttata
    41761 ccctcggtgg cgcggatatg ctgcgtcgtg cgatgggtaa gaaaaagccg gaagagatgg
    41821 ctaagcagcg ttctgtattt gctgaaggtg cagaaaagaa cggaatcaac gccgaactgg
    41881 cgatgaaaat cttcgacctg gtggagaaat tcgcgggtta cggatttaac aaatcgcact
    41941 ctgcggccta tgctttggtg tcatatcaaa cgttatggct gaaagcgcac tatccggcgg
    42001 agtttatggc ggcggtaatg accgccgata tggacaacac cgagaaggtg gtgggcctgg
    42061 tggatgagtg ctggcggatg gggctgaaaa tcctgccacc agatataaac tccggtcttt
    42121 accatttcca cgtcaacgac gacggcgaaa tcgtgtatgg tattggcgcc atcaaagggg
    42181 taggtgaagg tccgattgag gccatcatcg aagcccgtaa taaaggcggc tacttccgcg
    42241 aactgtttga tctctgcgcc cgtaccgaca ccaaaaagtt aaaccggcgg gtgctggaaa
    42301 aactgatcat gtccggggcg tttgaccgtc ttgggccaca ccgcgcggcg ctgatgaact
    42361 cgctgggtga tgcgttaaaa gcggcagatc aacacgcgaa agcggaagct atcggtcagg
    42421 ccgatatgtt cggcgtgctg gccgaagagc cggaacaaat tgaacaatcc tacgccagct
    42481 gccaaccgtg gccggagcag gtggtattag atggggaacg tgaaacgtta ggcctgtacc
    42541 tgaccggaca ccctatcaac cagtatttaa aagagattga gcgttatgtc ggaggcgtaa
    42601 ggctgaaaga catgcacccg acagaacgtg gtaaagtcat cacggctgcg gggctcgttg
    42661 ttgccgcgcg ggttatggtc accaagcgcg gcaatcgtat cggtatctgc acgctggatg
    42721 accgttccgg gcggctggaa gtgatgttgt ttactgacgc cctggataaa taccagcaat
    42781 tgctggaaaa agaccgcata cttatcgtca gcggacaggt cagctttgat gacttcagcg
    42841 gtgggcttaa aatgaccgct cgcgaagtga tggatattga cgaagcccgg gaaaaatatg
    42901 ctcgcgggct tgctatctcg ctgacggaca ggcaaattga tgaccagctt ttaaaccgac
    42961 tccgtcagtc tctggaaccc caccgctctg ggacaattcc agtacatctc tactatcaga
    43021 gggcggatgc acgcgcgcgg ttgcgttttg gcgcgacgtg gcgtgtctct ccgagcgatc
    43081 gtttattaaa cgatctccgt ggcctcattg gttcggagca ggtggaactg gagtttgact
    43141 aatacaggaa tactatgagt ctgaatttcc ttgattttga acagccgatt gcagagctgg
    43201 aagcgaaaat cgattctctg actgcggtta gccgtcagga tgagaaactg gatattaaca
    43261 tcgatgaaga agtgcatcgt ctgcgtgaaa aaagcgtaga actgacgcgt aaaatcttcg
    43321 ccgatcttgg tgcatggcag attgcgcaac tggcacgcca tccacagcgt ccttataccc
    43381 tggattacgt tcgcctggca tttgatgaat ttgacgaact ggctggcgac cgcgcgtatg
    43441 cagacgataa agctatcgtc ggtggtatcg cccgtctcga tggtcgtccg gtgatgatca
    43501 ttggtcatca aaaaggtcgt gaaaccaaag aaaaaattcg ccgtaacttt ggtatgccag
    43561 cgccagaagg ttaccgcaaa gcactgcgtc tgatgcaaat ggctgaacgc tttaagatgc
    43621 caatcatcac ctttatcgac accccggggg cttatccggg cgtgggcgca gaagaacgtg
    43681 gtcagtctga agccattgca cgcaacctgc gtgaaatgtc tcgcctcggc gtaccggtag
    43741 tttgtacggt tatcggtgaa ggtggttctg gcggtgcgct ggcgattggc gtgggcgata
    43801 aagtgaatat gctgcaatac agcacctatt ccgttatctc gccggaaggt tgtgcgtcca
    43861 ttctgtggaa gagcgccgac aaagcgccgc tggcggctga agcgatgggt atcatcgctc
    43921 cgcgtctgaa agagctgaaa ctgatcgact ccatcatccc ggaaccgctg ggtggcgctc
    43981 accgtaaccc ggaagcgatg gcggcatcgt tgaaagcgca actgctggcg gatctggccg
    44041 atctcgatgt gttaagcact gaagatttaa aaaatcgtcg ttatcagcgc ctgatgagct
    44101 acggttacgc gtaattcgca aaagttctga aaaagggtca cttcggtggc ccttttttat
    44161 cgccacggtt tgagcaggct atgattaagg aaggattttc caggaggaac acatgaacat
    44221 cattgccatt atgggaccgc atggcgtctt ttataaagat gagcccatca aagaactgga
    44281 gtcggcgctg gtggcgcaag gctttcagat tatctggcca caaaacagcg ttgatttgct
    44341 gaaatttatc gaacataacc ctcgaatttg cggcgtgatt tttgactggg atgagtacag
    44401 tctcgattta tgcagcgata tcaatcaact taatgaatat ctcccgcttt atgccttcat
    44461 caacacccac tcgacgatgg atgtcagcgt gcaggatatg cggatggcgc tctggttttt
    44521 tgaatatgcg ctggggcagg cggaagatat cgccattcgt atgcgtcagt acaccgacga
    44581 atatcttgat aacattacac cgccgttcac gaaagccttg tttacctacg ttaaagagcg
    44641 gaagtacacc ttttgtacgc cggggcatat gggcggcacc gcatatcaaa aaagcccggt
    44701 tggctgcctg ttttatgatt ttttcggcgg gaataccctc aaggctgatg tctctatttc
    44761 ggtcaccgag cttggttcgt tgctcgacca caccgggcca cacctggaag cggaagagta
    44821 catcgcgcgg acttttggcg cggaacagag ttatatcgtt accaacggaa catcgacgtc
    44881 gaacaaaatt gtgggtatgt acgccgcgcc atccggcagt acgctgttga tcgaccgcaa
    44941 ttgtcataaa tcgctggcgc atctgttgat gatgaacgat gtagtgccag tctggctgaa
    45001 accgacgcgt aatgcgttgg ggattcttgg tgggatcccg cgccgtgaat ttactcgcga
    45061 cagcatcgaa gagaaagtcg ctgccaccac gcaggcacaa tggccggttc atgcggtgat
    45121 taccaactcc acctatgatg gcttgctcta caacaccgac tggatcaaac agacgctgga
    45181 tgtcccgtcg atccacttcg attccgcctg ggtgccgtac acccattttc atccgatcta
    45241 ccaggggaaa agtggtatga gcggcgagcg tgttgcggga aaagtgatct tcgaaacgca
    45301 atcgacccac aaaatgctgg cggcgttatc gcaggcttcg ctgatccaca ttaaaggcga
    45361 gtatgacgaa gaggcgttta acgaagcctt tatgatgcat accaccacct cgcccagtta
    45421 tcccattgtt gcttcggttg agacggcggc ggcgatgctg cgtggtaatc cgggcaaacg
    45481 gctgattaac cgttcggtgg agcgggcgct gcattttcgc aaagaggtcc agcggttgcg
    45541 ggaagagtct gacggttggt ttttcgatat ctggcaaccg ccgcaggtgg atgaagccga
    45601 atgctggccc gttgcgccag gcgaacagtg gcacggcttt aacgatgcgg atgccgatca
    45661 tatgtttctc gatccggtta aagtcactat tttgacaccg gggatggacg aacagggcaa
    45721 tatgagtgag gaggggatcc cggcggcgct ggtggcaaaa ttcctcgacg aacgtgggat
    45781 cgtagtagag aaaaccggcc cttataacct gctgtttctc tttagtattg gtatcgataa
    45841 aaccaaagca atgggattat tgcgtgggtt gacggaattt aaacgctctt acgatctcaa
    45901 cctgcggatc aaaaatatgc tacccgatct ctatgctgaa gatcccgatt tctaccgcaa
    45961 tatgcgtatt caggatctgg cgcaagggat ccataagctg attcgtaaac acgatcttcc
    46021 cggtttgatg ttgcgggcat tcgatacttt gccggaaatg atcatgacgc cacatcaggc
    46081 atggcagaga cagattaaag gtgaagtaga aaccattgcg ctggaacaac tggtcggtag
    46141 agtatcggca aatatgatcc tgccttatcc accgggcgta ccgctgttga tgccaggaga
    46201 aatgctgacc aaagagagcc gcacggtact cgattttcta ctgatgcttt gttccgtagg
    46261 gcaacattac cccggttttg aaacggatat tcacggcgcg aaacaggacg aagacggcgt
    46321 ttaccgcgta cgagtcctaa aaatggcggg ataacttgcc agagcggctt ccgggcgagt
    46381 aacgtgctgt taacaaataa aggagacgtt atgctgggtt taaaacaggt tcaccatatt
    46441 gcgattattg cgacggatta tgcggtgagc aaagctttct actgcgatat tcttggtttc
    46501 acgctgcaaa gcgaagtcta tcgcgaagcg cgcgactcgt ggaaagggga tttggcgctt
    46561 aatgggcaat atgtgattga gcttttctct tttccgttcc cgccggagcg ccccagccga
    46621 ccggaagctt gcggcctgcg tcatctggct tttagcgttg atgacatcga tgcggcagtg
    46681 gcgcaccttg aaagccataa cgtgaagtgt gaagccatcc gtgtcgatcc atacacgcaa
    46741 aaacgcttca ccttctttaa cgatccggac gggctgccgt tggaactgta tgagcagtaa
    46801 ggcttgtcat cgccgcattt gcccggtaac gtgccgggca ttgctactgt aaaatcgcac
    46861 catcatgaca ctcacgctca atagacaact tctcacctca cgccagattc tggtggcctt
    46921 tagcggcggg cttgactcca ccgttctgct gcatcagttg gtgcagtggc ggacggaaaa
    46981 tccgggcgtc actctgcgcg ctattcatgt gcatcacggt ttaagtgcca atgccgatgc
    47041 ctgggttacg cattgcgaaa acgtctgcca acagtggcag gtgccgctgg tggtcgaacg
    47101 cgtacaactt gcgcaagagg ggctggggat tgaggcccaa gcgcggcagg cgcgttatca
    47161 ggcatttgcc cgtaccctat tgcccggcga agtgctggtc accgcgcaac atctcgacga
    47221 tcaatgtgaa acctttctgc tggcgctaaa acgcggtagc ggccctgccg ggctttcggc
    47281 tatgggggaa gtctcggagt ttgccggaac acggcttatc cgcccgttgc ttgcccgcac
    47341 gcggggggaa ctggcgcagt gggcattggc gcatggttta cgctggattg aagacgaaag
    47401 taatcaggac gactcatacg atcgtaactt tctgcgcctg cgtgtagtgc cgttattgca
    47461 gcagcgttgg ccgcattttg ccgaagcaac ggcccgcagc gccgcacttt gtgctgaaca
    47521 agagagtctg ttggatgaac tgctggcgga tgatttagca cactgccaaa cgtcgcaggg
    47581 gacgctgcag attgcgccaa tgctagcgat gagtgatgcc cgtcgcgcgg cgattatccg
    47641 ccgctggctg gcagggcaga atgcaccgat gccttcccgc gacgcgctgg tgcggatctg
    47701 gcaggaagtg gcgctggcgc gggaagatgc ctccccctgt ttacgcttgg gcgcgtttga
    47761 aatccgccga tatcagtcgc aactgtggtg gattaaatcc gtcaccgggc aaagtgaaac
    47821 cattgtgccg tggcagacgt ggctacaacc gctggaatta ccggcggggc tgggaagcgt
    47881 acagcttact gcgggaggcg atattcgccc tccgcgtgca gacgaagcgg tcagcgtgcg
    47941 tttcaaagcg gcaggattgc tgcatattgt cgggcgcaac ggcggacgta agctgaagaa
    48001 aatctggcaa gagttaggcg tgccgccgtg gctacgtgac accacgccac tgctgtttta
    48061 tggcgaaacg ctgattgcgg cggcaggggt atttgtgacg caagaaggtg tggctgaagg
    48121 tgagaatggc gtaagttttg tctggcagaa aacgcttagt taagtgaaag ccggataaga
    48181 cgcatcaaac gtcgcatccg gcgaaagtca atcaggactc gctcaccacc accgtaccga
    48241 tttccgggtg gctaaagctg gtaattttat ccagacgtag ctcacgggtt tcgccagcgg
    48301 cctcgacgac cagatactcc acatttttgc gggagactaa atcgctggct tttgcctgca
    48361 atttttcgcc atctttcagc tcaagtgtca gcattaaatg atgctggcag gcgagctcaa
    48421 gattatcgta atcatcacaa ttgattggtt gatacgtatc attcattgac ataatcgctc
    48481 accagtaagt ttgccgcagc gtatgctgct ttttccctga cagcctcaga aagggcgtcg
    48541 tcggcagcca tttcattcag cactttcaaa acgcagccca gcgcgtccgg aacgtatcct
    48601 aagtctccgc tggcgatttc cgcgtaccgc ttgcgtatta actcacaata tttttccaca
    48661 tgccctcctg tcagcactct gacttaaccg tggatgcaag tctaagccta cgaagataaa
    48721 ctctgtttcg caaggtgact ataccacact catttctgca atatcagcgc cgcaactgca
    48781 cgtattccgt tacaatggcc tcctgattcg aaaggagttt tcttatggcg cttaaagcga
    48841 caatttataa agcgacggtt aatgtggccg atctcgaccg caaccagttt ctcgatgcct
    48901 ctctgacgct ggcgcgccac ccttcagaaa cccaggagcg tatgatgctg cgcttgctgg
    48961 cgtggctgaa atatgctgat gaacgtctgc aatttacccg tggtttgtgt gccgatgatg
    49021 agccggaagc gtggctgcgt aacgatcacc tgggcattga tttgtggatt gagctggggc
    49081 tgccggatga gcggcggatt aagaaagcct gcacccaggc cgcagaagtg gcgctgttta
    49141 cctataatag tcgggcggcg caaatctggt ggcagcaaaa tcagagcaaa tgtgtgcagt
    49201 ttgccaatct ttccgtctgg tatctggacg atgaacaact ggcgaaagta agcgcctttg
    49261 ccgatcgtac catgacgctg caggcaacga ttcaggatgg cgtgatctgg ttatcggacg
    49321 ataagaataa tctggaagtt aacttaaccg cctggcaaca accttcatga ttgtgatttc
    49381 ccgacatgtt gctattcccg atggtgagct tgagatcacc gccattcgtg cgcagggcgc
    49441 gggcgggcag catgttaata agacctcaac ggccattcat ctgcgttttg acattcgggc
    49501 gtccagcctg ccagagtatt acaaagagcg tctactcgcc gccagccatc atttgatcag
    49561 cagtgatggc gtgattgtca ttaaggcaca ggaataccgc agtcaggaac tgaaccgcga
    49621 agccgcgcta gcccggctgg tggcagtgat taaagattta acaacagaac aaaaagcccg
    49681 acgacccacg cggcccaccc gtgcatcgaa agagcgcagg ctggcatcga aagcacaaaa
    49741 atcaagcgtg aaggcgatgc gcggcaaagt acgcagcggt cgggaataaa aagaaggaat
    49801 agatggtgaa aaaagcgata gtgacagcga tggctgtaat cagcctcttt actctgatgg
    49861 gatgtaataa ccgggccgaa gtcgatacgc tttctccagc acaggctgcc gaactgaaac
    49921 cgatgccgca aagttggcgc ggcgtgctgc cgtgtgctga ttgcgaagga atcgaaacct
    49981 ctctgttcct cgaaaaagac ggaacatggg tgatgaatga gcgttatctc ggtgctcgtg
    50041 aagaaccttc ctccttcgct tcctacggta catgggcgcg aaccgctgac aagctggtat
    50101 taaccgacag caaaggtgaa aagtcatatt atcgggcgaa aggcgatgcg ctggagatgc
    50161 tcgatcgtga aggcaatccg attgaatcgc agttcaacta tacgctggaa ccggcacaat
    50221 ctagtttacc tatgacgccg atgaccctgc gaggcatgta tttttatatg gctgatgcgg
    50281 cgaccttcac tgattgcgcg accggaaaac gtttcatggt agcgaataac gcagagctgg
    50341 agcgtagcta cctggctgcg cgcggtcaca gtgaaaaacc ggtgttactg tcagtagaag
    50401 gtcactttac gcttgaggct aatccggata ctggtgcgcc aaccaaagta ttagcgcccg
    50461 atacggcggg taaattttac ccgaataagg attgcagtag tttggggcag taaacctgct
    50521 taaggcagaa acaaacgcaa aattgcctga tgcgctgcgc ttatcaggcc tacagcatat
    50581 aatgcaacat tttgaattag cacgattttg taggccggat aaggcgttta cgccgcatcc
    50641 ggcattttgt gcacgaggct ggctttatca ctgagtcagc ccaacaaagc gacccgcctt
    50701 gatataaatc ccaggcttca ggtgcccaac atactgtaac tgcgtttctg gcttaaacgc
    50761 agagacatca ccaatacgca tatgcatcag atcggcaggg ctaatccagc ccgattgcgc
    50821 cagtgtaagt ggatgcccgg ctttggcaaa ggcatccgtg acaaattccg aacaaaacca
    50881 cgactttttg tctccttcgc ccacactgct taactgcgct ttcgccaggc cgctgacgca
    50941 ctttggcgaa aatcctcgga gaacggattc agtgagcaca tctggcgagt caccataaag
    51001 ggaataaatt cgacaatgcc gcgatagtta taaccgctat ctttgatttt attggcaaac
    51061 gcggtgatat ctgtggcttg ttgcggggta agatccggga ctcgtaagac gaaaagctta
    51121 tcactatgct tcatcgcttt tttaagggaa acaatctgga cgccagcgcc tgtcgcttct
    51181 gcaacgttat tatcacccag aaagattgca acgtgactca cagaggaagt gctgaagacg
    51241 cggattccaa atgaggttac cccaaggctt gaggagaaca gcaaatcgcc gggtttgaga
    51301 tcaggtgccg ttatttcttt tattgattgt tcggtgaaag agctttgatg ctggaatttg
    51361 acagcccatg tttttgcctc ggcatctact gctgtggctg atgggtctgg ctggctgata
    51421 tcaacggtac aagccgaaag taaaagaaag ctggggagaa acaggcggca gtacgccttt
    51481 ggtttatcca ttttatacaa tccatgtaaa aaaagggccc tgaaattcag gaccctttct
    51541 ggcatcagcc tttaatctgt ttcaccagat attcgacgat gtcaccagtc ttaattaact
    51601 gtttctcgcc gttgcgacga tatttatatt cgatatcgtc gttgtcgagg ttacggtcgc
    51661 ccagcacaat agtgtgcgga ataccgatca gttccatatc agcaaacatc acgcccggac
    51721 gctctttgcg gtcatccagc agcacttcga taccttgtgc acgcagttcg ctgtacagtt
    51781 tctcagcaag ctcttgtacg cggaaggatt tgtgcatgtt catcggcaga atcgccacct
    51841 ggaacggcgc gatagcgtca ggccatacga tgcctcgttc gtcgtagttc tgctcaatcg
    51901 ccgcagctac cacacgcgtt accccgatac cgtagcaacc catcgtcagg atttggttac
    51961 ggccatcttc accctgtacg gaggctttca gtgcttcgga gtacttggta cccagctgga
    52021 agatgtgacc aacttcgata ccacgtttga tcagcagcgt accctggcca tccgggcttg
    52081 gatcgccagc caccacgtta cggatatctg caacttccgg ggtagcgaca tcgcgatccc
    52141 agttgatgcc gaagtagtgt ttaccatcga tgttagcacc agcagcgaaa tcactcatcg
    52201 ccgcaacggt acggtcaatc accaccggaa tcggcatgtt taccggaccc agtgaacccg
    52261 gaccggcttt aaccacggca cgaatttctt cttcggtcgc gaaagtcagc gggcttgcaa
    52321 cctgcggcag tttttctgct ttaacttcgt tcagctcgtg atcaccgcgc accagcagcg
    52381 caaccagcgg gaagctactg ccttcaaccg ctttaaccag cagagtctta accgttttct
    52441 caatcggcag attgaactgt tcaaccagtt ccgcgatggt tttcgcgttc ggcgtatcaa
    52501 ccagcgtcat ttcctgggta gcagcagcgc gcggttcttt cggcgcgata gcttctgcca
    52561 gttcaatgtt cgctgcatag tcagaggtgt cggagaagac cacatcgtct tcaccgctct
    52621 gcgccagcac ctggaattcg tgagaggcgc tgccgccgat agaaccggtg tcggcttgta
    52681 cggcgcggaa atccagcccc atgcggctga agattttgct gtaggccgca tacattgcat
    52741 cgtaggtttc ctgcagggat tcctgagaag tatggaaaga gtaagcatct ttcatcagga
    52801 attcgcggga acgcatgacg ccgaaacgcg gacgcacttc gtcgcggaac ttggtctgga
    52861 tctgatagaa gttcagcggc agctgtttgt aagagctaag ctcgttacga atcaggtcag
    52921 tgataacttc ttcatgagtt gggccgagta cgaacggacg ctcgccacgg tcaacaaaac
    52981 gcagcagttc cggaccgtac tgttcccaac gaccactctc ttgccacaaa tcagctggct
    53041 gaaccaccgg catcgacacc tcgatcgcac cggcgttgtt catctcttca cgcacgatgt
    53101 tttcgacttt tttcagaacg cgcacgccgg tcggcagcca ggtatataac ccggaggcca
    53161 gcttgcggat catcccggcg cgcagcatca gctgatggct gatcacctcg gcgtcggcag
    53221 gtgtctcctt gagagtggag agcaggtatt ggctagtacg catgttgtta cggttccagt
    53281 tggaaggtag aacaggctca aggcgagcct gggacaaaaa aaagtgattt agtttaccag
    53341 tgcaaaagaa atgtcaaaag agaagggcgt gaatttaacg cggttccagc gcaaagactt
    53401 caaaacctgc gtcggtgacg cgccagcgaa cgttaaaatc atgtagccag acggcatagg
    53461 ttttgcccgt ttcctcacct ttacgatagg ccgggcgtgg gtcctgcgcc agtacttcgc
    53521 ggataaacag cgttaactgc ggataacgct tctccagcgt caaaagctgc ttttcgacct
    53581 ctgcggtaaa actcaccgcc atctctgccg ctggcgcact ttgcgcatag ctggcactgg
    53641 catcgggaag cgattcggca aaggggagat acggtttgat atccactacc ggcgtaccat
    53701 cgaccagatc cagactgccg agcttcagaa tcacgctgtc tttatggcaa acaacctctt
    53761 tcagctctac cagcgacata ccaattgggt tagggcggaa agtagagcgt gttgcgaaaa
    53821 cccccattct ggcgttaccg ccgaggcgcg gtggacgcac agtcggacgc cagccgcctt
    53881 ccatcgtttg atgaaagacg aaaaggatcc ataaatggct gaacgcttcc aggccgcgaa
    53941 cggcgtcggc ctggttgtag ggagcaatga gatgcagttc gccgttggcg ctttttacca
    54001 gacctggctg gcgcggaacg gcgaattttt ctttataggg cgagcgaata acgcctattt
    54061 gctcgaactg gaaactgctc atttcgccgt aatgttaagc gcagagccga tacatacagc
    54121 ctgacgatag cagcctggcg taccgctggt gacttcgcag ctatgcagta ataccgcatt
    54181 ggccttcatt ttcgaggcgt tgatttgcat ccgcttacgc gcggttggaa tgctcggcgg
    54241 agagtcctga ttagaggcct ggcaagagtc gccactgact tcaccgagat cgcggaacgg
    54301 tttgccgact aattcttctg cattggtata aattcggacc ggcgtggcgc gcggcgcttt
    54361 cggttttgca ggctccgctt tcggctgggg tgcagtgctt tgaacgggtt cgacagggga
    54421 tctgcttaac atggaacagc cgcttagcat gagtgctact aaacagatcg gtaaagcacg
    54481 catagtattt cctcaatgta tgatcaaaac gtcaatattg aatcaggagc ttgtaaaaat
    54541 gacaagacgg gcaagcgccc gtcctgaatg atattacaaa ttgtggaaac agcctaaaaa
    54601 ttaccagcct ttaacagcgc cgccgttaaa cactttgttt gctgcttcgt aaacttcatc
    54661 agactgataa gcctggacga atttcttcac gttctcggcg tctttgttat cttcacgcgt
    54721 tacgatcagg tttacgtacg gggagtcttt atcttcgaca aagataccgt ctttcgctgg
    54781 agtcaggcca atctggctgg cataggtggt attgataact gccagagcga tttgcgcgtc
    54841 gtccagagat cgaggcagct gcggtgcttc cagctcaaca attttcagat tttttgggtt
    54901 ctcaacaaca tcaagaacgg tcggcagcag gccaacgcca tctttcagtt tgatcaagcc
    54961 cactttttgc agcagcagca gtgaacgacc aagattagtt ggatcgtttg gcacggcaac
    55021 ctgcgaacca tcctgcagtt catccagtga tttgattttc ttggagtaac cagcaatcgg
    55081 ataaacaaaa gtgttgccta ctgcgaccag tttgtagcca cgatctttca gttgctgatc
    55141 aaggtacggt ttatgctgga aggcgttggc gtcgatatcg cctttgctca atgcttcgtt
    55201 tggcagaaca tagtcgttga aggttaccag ctcaacgtcc aggccatatt tgtctttcgc
    55261 aactttctgc gcgacttctg ctacctgctg ttcggcacca acaatcacgc cgactttaat
    55321 gtggtttgga tctttttcat cctgaccgca gcctaccagt gccagtgatc caatcagggc
    55381 tcccactgcc gcaaaggttt tgaatttgaa cgccatacct tattccttct tcaattattt
    55441 atgttgtgtt gaacgttact tgcgagtgac agcccggacg atgcggtcgc ctgcgaactg
    55501 aattaaataa accagaatga ccagcaatac cagtaccgta ttcatcaccg tcgcgttata
    55561 gccgatgtag ccatactgat agccaatctg acctaaacca ccggcaccga ctgcaccacc
    55621 catcgcggaa taaccgacca gggtaatcag ggtgatagtt gccgcattca ccagacccgg
    55681 caatgcttcc ggtaacagca ctttacggac gatctgcatc ggcgtggcac ccattgcacg
    55741 ggaagcttca attaacccgg ttgggatctc cagcagagcg ttctcgacca tacgggcaat
    55801 aaacggtgct gcaccaacgg ttaacggaac aatcgctgcc tgcaaaccaa tcgatgtacc
    55861 gacaataacg cgggtaaacg gaatcatcca taccagcaag ataatgaacg ggatggaacg
    55921 gaaaatgttc acaatcgcag aaacggtacg atacagcttc gcgttagcaa taatttgccc
    55981 cgggcgcgta acataaagca ggacgccgac cggcagacca atcacaaagc caaaaaatcc
    56041 ggatacgaag gtcattgcca gcgtttccca tacgccacga accagcaacc acatcatcgg
    56101 ctcagacata acccagtacc tctactttta catggtgttc ctgcagccag gcaatggcgg
    56161 cttgcgtatc ttgttgtgtg ccgtgcattt cagtcagcat gatgccgaac ttaacgccac
    56221 cggcgtaatc catctgcgcg ctaataatgt tgttgttgac gttgaaacga cgcgcggttt
    56281 cagaaagcag cggggcatcg accgattgac cggtaaactc caggcgcaac atcggcacgc
    56341 agtcagtaaa tggctccgct tgcagacgtt cctggtaatc ttccgggata tccagatgca
    56401 gggtcgactg aataaacttc tgcgccagcg gcgttttcgg atgcgagaac acttcactta
    56461 ccgtgtcctg ctcgatcagt tcgccattgc tgatgaccgc cacgcaatca caaatacgct
    56521 tcacaacgtc catttcgtgg gtgatcaaca gaatcgtcaa acccagacgg cggttaatgt
    56581 ctttcagcag ttcgagaata gaacgtgtcg ttgccgggtc cagcgcgctg gtggcttcat
    56641 cacacagcaa tactttggga ttgctggcta atgcacgggc aatcgccaca cgttgtttct
    56701 gcccaccgga aagattcgac gggtagctat catgcttatc gccaagacca accaatgaca
    56761 gcaattccgt cacgcgacgt ttgatctcgt ctttcggtgt gttgtccagc tccagcggca
    56821 gagccacgtt gccaaaaaca gtacgcgaag agagcaggtt aaaatgctgg aaaatcatac
    56881 caatctggcg gcgagctttg gtcaactcgg attctgacag cgtggtcagt tcctggccat
    56941 cgaccagcac gctaccctcg gttgggcgct ccagcaggtt tacacaacgt ataagcgtac
    57001 tcttacccgc gcctgaggca ccgataacgc cataaatttg tccagctggc acatgcaggc
    57061 tgacgttgtt caacgcctgg atggtgcggg tgccctggtg gaacactttg gtgatattcg
    57121 aaagttttat cattgattat ttattatcgt cattaagtta gtcgtggcat ttcgaatgcc
    57181 tgaaacgggc aacgccgtca atgaaatgga tgttaaggca tccagacgtc taaatcaatc
    57241 aggtttatgc gaagagcact ttcttgcagg tcgaaacatg cgatactagc gtcacatgcc
    57301 ttattaagga gctataaaag gtggcgaaga gcgtacccgc aatttttctt gaccgtgatg
    57361 gcaccattaa tgtcgatcac ggctatgtcc atgagatcga caactttgaa tttatcgacg
    57421 gtgttattga cgccatgcgc gagctaaaaa aaatgggctt tgcgctggtg gtagtaacca
    57481 accagtctgg cattgctcgc ggtaaattta ctgaagcgca gtttgaaacg ctgaccgagt
    57541 ggatggactg gtcgctggcg gaccgcgatg tcgatctgga tggcatctat tattgcccgc
    57601 atcatccgca gggtagtgtt gaagagtttc gccaggtctg cgactgccgc aaaccacatc
    57661 cggggatgct tttgtcagca cgcgattatt tgcatattga tatggccgct tcttatatgg
    57721 tgggcgataa attagaagat atgcaggcag cggctgcggc gaacgtggga acaaaagtgc
    57781 tggtgcgtac gggtaaacct attacgcctg aagcagaaaa cgcggcggat tgggtgttaa
    57841 atagcctggc agacctgccg caagcgataa aaaagcagca aaaaccggca taatgattaa
    57901 aagatgagca attgaaataa aaatgcattt ttccacttgt cttcctgaga cgactcccta
    57961 taatgcgcct ccatcgacac ggcggatgtg aatcacttca cacaaacagc cggttcggtt
    58021 gaaga
//
LOCUS       DAPGWB010000012        56356 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.012, whole genome shotgun sequence.
ACCESSION   DAPGWB010000012 DAPGWB010000000
VERSION     DAPGWB010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 56356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 56356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..56356
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.012"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(253..846)
                     /gene="tehB"
                     /locus_tag="RHX79_000728"
     CDS             complement(253..846)
                     /gene="tehB"
                     /locus_tag="RHX79_000728"
                     /EC_number="2.1.1.265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
                     /protein_id="HDV2195933.1"
                     /translation="MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRN
                     SLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILST
                     VVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYY
                     EGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK"
     gene            complement(843..1835)
                     /gene="tehA"
                     /locus_tag="RHX79_000729"
     CDS             complement(843..1835)
                     /gene="tehA"
                     /locus_tag="RHX79_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HDV2195934.1"
                     /translation="MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGL
                     VILAMIIWGLLTSAFITRLIRFPHSVLAEVRHPVMSSFVSLFPATTMLVAIGFVPWFR
                     PLAVCLFSFGVVVQLAYAAWQTAGLWRGSHPEEATTPGLYLPTVANNFISAMACGALG
                     YTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSV
                     NGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGS
                     GSENGFFHTLAVPLFIFTNFIIAILLIRTFALLMQGKLLVRTERAVLMKAEDKE"
     gene            1959..2939
                     /locus_tag="RHX79_000730"
     CDS             1959..2939
                     /locus_tag="RHX79_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LbetaH domain-containing protein"
                     /protein_id="HDV2195935.1"
                     /translation="MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAG
                     GWIDRETVLAQEGNCWIYDQNAIAFGGAVISGNTRITGTSVLWGEVYATDNVWIDNSE
                     ISQGAYISDSVTIHDSLVCGQCRIFGHALINQHSMIVAAQGLTPDHQLLLQIYDRARV
                     SASRIVHQAQIYGDAVVRYAFIEHRAEVFDFTSVEGNEENNVWLCDCAKVYGHAQVKA
                     GIEEDAIPTIHYSSQVAEYAIVEGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESR
                     ISGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRTPLAGLL"
     gene            complement(2934..3470)
                     /gene="rimL"
                     /locus_tag="RHX79_000731"
     CDS             complement(2934..3470)
                     /gene="rimL"
                     /locus_tag="RHX79_000731"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12-serine
                     acetyltransferase"
                     /protein_id="HDV2195936.1"
                     /translation="MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQF
                     VQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDE
                     SHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE
                     FLNDAYDDVNLYARIIDS"
     gene            complement(3533..3757)
                     /locus_tag="RHX79_000732"
     CDS             complement(3533..3757)
                     /locus_tag="RHX79_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415943.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDV2195937.1"
                     /translation="MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGY
                     NAEVVRMKKQKLQLKDEMLKILQQESVKEV"
     gene            complement(3897..5552)
                     /gene="opgD"
                     /locus_tag="RHX79_000733"
                     /gene_synonym="mdoD"
     CDS             complement(3897..5552)
                     /gene="opgD"
                     /locus_tag="RHX79_000733"
                     /gene_synonym="mdoD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein OpgD"
                     /protein_id="HDV2195938.1"
                     /translation="MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQR
                     FDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLD
                     AQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
                     FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFW
                     FDTVKPGATTFTVYALLDSASITGAYKFTIHCEKSQVIMDVENHLYARKDIKQLGIAP
                     MTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNP
                     KGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVC
                     FWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEK
                     WARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEPIDGYRIQFDWYPTSD
                     STDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS"
     gene            complement(5777..7120)
                     /locus_tag="RHX79_000734"
     CDS             complement(5777..7120)
                     /locus_tag="RHX79_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDV2195939.1"
                     /translation="MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVL
                     ENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQA
                     GVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCR
                     QLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFP
                     GCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLF
                     AGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQDTFRTFP
                     DSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVS
                     AAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL"
     gene            7337..8260
                     /locus_tag="RHX79_000735"
     CDS             7337..8260
                     /locus_tag="RHX79_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310054.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2195940.1"
                     /translation="MEKNSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSK
                     TLNELEQLTGARLFERGRQGAQLTLPGEQFLTHAVRVLDAINTAGQSLHRKEDLNNDV
                     VKVGALPTAALGILPSVIGQFHQQQKETTLQVATMSNPMILAGLKTGEIDIGIGRMSD
                     PELMTGLNYELLFLESLKLVVRPNHPLLQENVTLSRVLEWPVVVSPEGTAPRQHSDAL
                     VQSQGCKIPSGCIETLSASLSRQLTVEYDYVWFVPSGAVKDDLRHATLVALPVPGHGA
                     GEPIGILTRVDATFSSGCQLMINAIRKSMPF"
     gene            complement(8298..9938)
                     /gene="trg"
                     /locus_tag="RHX79_000736"
     CDS             complement(8298..9938)
                     /gene="trg"
                     /locus_tag="RHX79_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein Trg"
                     /protein_id="HDV2195941.1"
                     /translation="MNTTPSQRLGFLHHIRLVPLFACILGGILVLFALSSALAGYFLW
                     QADRDQRDVTAEIEIRTGLANSSDFLRSARINMIQAGAASRIAEMEAMKRNIAQAESE
                     IKQSQQGYRAYQNRPVKTPADEALDTELNQRFQAYITGMQPMLKYAKNGMFEAIINHE
                     SEQIRPLDNAYTDILNKAVKIRSTRANQLAELAHQRTRLGGMFMIGAFVLALVMTLIT
                     FMVLRRIVIRPLQHAAQRIEKIASGDLTMNDEPAGRNEIGRLSRHLQQMQHSLGMTVG
                     TVRQGAEEIYRGTSEISAGNADLSSRTEEQAAAIEQTAASMEQLTATVKQNADNAHHA
                     SKLAQEASIKASDGGQTVSGVVKTMGAISTSSKKISEITAVINSIAFQTNILALNAAV
                     EAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKTM
                     STIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVTQQNASLVEEASAAAVS
                     LEEQAARLTEAVDVFRLNKHSVSAEPRGAGEPVSFATV"
     gene            10337..10486
                     /gene="hokB"
                     /locus_tag="RHX79_000737"
     CDS             10337..10486
                     /gene="hokB"
                     /locus_tag="RHX79_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokB"
                     /protein_id="HDV2195942.1"
                     /translation="MKHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALM
                     ACTSR"
     gene            complement(10558..10731)
                     /locus_tag="RHX79_000738"
     CDS             complement(10558..10731)
                     /locus_tag="RHX79_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2195943.1"
                     /translation="MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCN
                     DGSISASKKTCTN"
     gene            complement(10976..11506)
                     /gene="cybB"
                     /locus_tag="RHX79_000739"
     CDS             complement(10976..11506)
                     /gene="cybB"
                     /locus_tag="RHX79_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415935.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b561"
                     /protein_id="HDV2195944.1"
                     /translation="MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMI
                     HVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGL
                     VMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHY
                     FWKDNTLLRMMPRKRS"
     gene            11695..12696
                     /gene="gap"
                     /locus_tag="RHX79_000740"
     CDS             11695..12696
                     /gene="gap"
                     /locus_tag="RHX79_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDV2195945.1"
                     /translation="MSKVGINGFGRIGRLVLRRLLEVKSNIDVVAINDLTSPKILAYL
                     LKHDSNYGPFPWSVDFTEDSLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTS
                     AEKSQAHLDAGAKKVLISAPAGEMKTIVYNVNDDTLDGNDTIVSVASCTTNCLAPMAK
                     ALHDSFGIEVGTMTTIHAYTGTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIGLV
                     IPELSGKLKGHAQRVPVKTGSVTELVSILGKKVTAEEVNNALKQATTNNESFGYTDEE
                     IVSSDIIGSHFGSVFDATQTEITAVGDLQLVKTVAWYDNEYGFVTQLIRTLEKFAKL"
     gene            complement(12738..14177)
                     /gene="aldA"
                     /locus_tag="RHX79_000741"
     CDS             complement(12738..14177)
                     /gene="aldA"
                     /locus_tag="RHX79_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDV2195946.1"
                     /translation="MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAE
                     DARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE
                     VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIA
                     RKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAG
                     NPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDS
                     RVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAAL
                     ERVEQKVARAVEEGARVALGGKAVDGKGYYYPPTLLLDVRQEMSIMHEETFGPVLLVV
                     AFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHA
                     GWRKSGIGGADGKHGLHEYLQTQVVYLQS"
     gene            complement(14374..15174)
                     /locus_tag="RHX79_000742"
     CDS             complement(14374..15174)
                     /locus_tag="RHX79_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDV2195947.1"
                     /translation="MNITPFPTLSTATIDAINVIGQWLAQDDFSGEVPYQADCVILAG
                     NAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATIL
                     ADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTM
                     ATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFVNPLQGLWPVERYLSLLTGELPR
                     LRDDSDGYGPRGRDFIVHVDFPAEVIHAWQTLKHDAVLIEAMESRSLR"
     gene            complement(15446..19348)
                     /gene="hrpA"
                     /locus_tag="RHX79_000743"
     CDS             complement(15446..19348)
                     /gene="hrpA"
                     /locus_tag="RHX79_000743"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415931.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HDV2195948.1"
                     /translation="MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQ
                     AIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET
                     GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRF
                     SDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP
                     RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ
                     AIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR
                     VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS
                     ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA
                     FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE
                     AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG
                     EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI
                     ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR
                     IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI
                     DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF
                     YDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN
                     LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV
                     RRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT
                     FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE
                     QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK
                     LPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELN
                     DTVVDIAKQVEQILTAVFNINKCLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK
                     RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVK
                     EIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG"
     gene            19549..20154
                     /gene="azoR"
                     /locus_tag="RHX79_000744"
     CDS             19549..20154
                     /gene="azoR"
                     /locus_tag="RHX79_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HDV2195949.1"
                     /translation="MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLA
                     ANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNIS
                     TQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTF
                     LGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVAA"
     gene            complement(20205..21521)
                     /locus_tag="RHX79_000745"
     CDS             complement(20205..21521)
                     /locus_tag="RHX79_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310040.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2/dual specificity phosphatase
                     family protein"
                     /protein_id="HDV2195950.1"
                     /translation="MITERRNVLLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDI
                     PSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFVCSTTFEQRRLVHRLILATVMACCG
                     FLLYPLKFSFIRPEVSGVTGWLFSQLELFDLPYNQSPSLHIILCWLLWRHFRQHLAER
                     WRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQRRIK
                     IALPYVVGAGSCIVLMELMVMIQLWWSVWLCWPVLSLLIIGRGYGGLGAITTGKDSQG
                     KLPPAVYWLTLPWRIGMWLSMRWFCRRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTF
                     EFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSA
                     LVVAAWLLCYGHCKTVDEAISYIRARRSHIVLKEDHKAMLKLWENR"
     gene            complement(21511..23268)
                     /locus_tag="RHX79_000746"
     CDS             complement(21511..23268)
                     /locus_tag="RHX79_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/class I
                     SAM-dependent methyltransferase"
                     /protein_id="HDV2195951.1"
                     /translation="MENSRIHGEHFFTSSDNTALFYRHWPALQPGAKKVIVLFHRGHE
                     HSGRLQHLVDELAMPDTVFYAWDARGHGQTSGPRGYSPSLARSVQDVDEFVRFAASDS
                     QVGLDEVVVIAQSVGAVLVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHR
                     LRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIIRDAAAI
                     TLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQ
                     SFISRLYANKSQKFDYQHEDRTGPSADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGA
                     HSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQ
                     ILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQA
                     MIAQRGMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYELFPENEQVKNSLAGLAN
                     AIEPGGILIYTGQPWHPQLEMIAGVLTSHKDGKPWVMRVRSQGEMDSLVRDAGFDKCT
                     QRIDEWGIFTVSMAVRRDN"
     gene            complement(23284..24180)
                     /locus_tag="RHX79_000747"
     CDS             complement(23284..24180)
                     /locus_tag="RHX79_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDV2195952.1"
                     /translation="MLEKSLATLFALLILATLINHFLLWRLPERKEDEVTLRIRTWWG
                     IVICFSLVISGPRWMTLTFFALISFLALKEYCTLISVHFPRWLYWVIPLNYLFIGFNC
                     FELYLLFIPLAGFLILATGQVFMGDPSGFLHTVSAIFWGWIMTVFALSHAAWLLMLPT
                     TNIQGGALLVLFLLALTESNDIAQYLWGKSCGRRKVVPKVSPGKTLEGLVGGVITTMI
                     ASLIIGPLLTPLNTLQALLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLPGHGGLL
                     DRIDSLIFTAPVFFYFIRYCCY"
     gene            complement(24180..24785)
                     /locus_tag="RHX79_000748"
     CDS             complement(24180..24785)
                     /locus_tag="RHX79_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310037.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HDV2195953.1"
                     /translation="MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGL
                     LLMLVAQPILFMLLPIVLFIRMALNALDGMLARECNQQTRFGAILNETGDVISDIALY
                     LPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGL
                     AVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLLMSAER"
     gene            complement(24956..27262)
                     /locus_tag="RHX79_000749"
     CDS             complement(24956..27262)
                     /locus_tag="RHX79_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415925.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2773 domain-containing bactofilin"
                     /protein_id="HDV2195954.1"
                     /translation="MFKARICGWIGLLPLFMLSLPVQAELRCVANTFDIEPFFSAATA
                     EDKQQVEQAINSSVNLVPFGLSASDWKVHRGDLVVEGNIESNQKLIVLGNLTVKGNIS
                     TFSLSNPWVILGNVTATNIVTDSPLLITGSINASGLVFIDSYYDNPSSIKGSINARGI
                     FINDIIAPVVASSTNSEFMVRASDKNDTENVKKALMIINPDAYYWGLINDEDALKEIF
                     KRSNIRMAGNVCNQMKKEALFRPKPSPELVQELQMLDEGNVAAFEGRDIATFDLAIMR
                     TLPRLKGISANLRKQLINSNDEQTIESMARYMPDNEILELTDQQLGYQPVVLGLLDRE
                     PLSVEIMTRMSRLPDGVGPLNLALRENLPLDIVMTLAKRDWDMIIQELYKDAWLLPES
                     IIDGYIRSDDSSIRQVGAGGQLTYNQAMQLANDSSNNVVTSLAFKLAEMKHHGQLLRM
                     TPQESDKVAAYLYQKFENDDDLIRVLFLALPDNLQFNFVKRMEKKSPAYFCCRDMQVI
                     HSDAALQRLLTRFNDPEGWSNLAKNQYLSTSMKQKIWQRALSHRKNDPKADSAAYETS
                     ADMILSELISHGEVDDQMLLNATALIRLEDWDFLESALVSWDNLPAVVLKELQQNTPR
                     NDIWAKFFLRQENSSRAQVDEALRVYYALDPDALAQLDVLAKQPDRIWWSTLAKSNLT
                     FFKFGALNNRHTLPAVLAAEIDPEWWIVAMNNPRFPVDVLKARLKRDPLLALELVNPE
                     LDLVRQLALNGKTRAIREQAMRKLDELY"
     gene            complement(27326..28186)
                     /gene="pdxI"
                     /locus_tag="RHX79_000750"
     CDS             complement(27326..28186)
                     /gene="pdxI"
                     /locus_tag="RHX79_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 4-dehydrogenase"
                     /protein_id="HDV2195955.1"
                     /translation="MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLRE
                     ALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPA
                     ELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIG
                     LSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALAHDGIAYVPFFPLGGFTPL
                     QSSTLSDVAASLGATPMQVALAWLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEV
                     LSTLDGISRE"
     gene            complement(28416..29006)
                     /gene="paaY"
                     /locus_tag="RHX79_000751"
     CDS             complement(28416..29006)
                     /gene="paaY"
                     /locus_tag="RHX79_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation protein PaaY"
                     /protein_id="HDV2195956.1"
                     /translation="MPIYQIDGLTPVVPEESFVHPTAVLSGDVILGKGVYVGPNASLR
                     GDFGRIVVKDGANIQDNCVMHGFPEQDTVVEEDGHIGHSAILHGCIIRRNALVGMNAV
                     VMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQ
                     VLVTRCKQTLHQVEPLREVEPGRQRLVFDENLRPKQ"
     gene            complement(28988..29938)
                     /gene="paaX"
                     /locus_tag="RHX79_000752"
     CDS             complement(28988..29938)
                     /gene="paaX"
                     /locus_tag="RHX79_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation operon negative
                     regulatory protein PaaX"
                     /protein_id="HDV2195957.1"
                     /translation="MSKLVTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLA
                     ALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYRAE
                     QPAWDGKWLLLLSEGLDKSTLADVKKQLIWQGFGALAPSLMASPSQKLADVQTLLHEA
                     GVADNVICFEAQIPLALSRAALRARVEECWHLTEQNAMYETFIQSFRPLVQLLKEAAD
                     ELTPERAFHIQLLLIHFYRRVVLKDPLLPEELLPAHWAGHTARQLCINIYQRVAPAAL
                     AFVSEKGETSVGELPSPGSLYFQRFGGLNIEQEALCQFIR"
     gene            complement(30039..31352)
                     /gene="paaF"
                     /locus_tag="RHX79_000753"
     CDS             complement(30039..31352)
                     /gene="paaF"
                     /locus_tag="RHX79_000753"
                     /EC_number="6.2.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HDV2195958.1"
                     /translation="MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKF
                     DAAGVHPDDFRELSDLRKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTV
                     VGYTQNDIDNWANIVARSLRAAGGTPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIP
                     MSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPW
                     TQAMRKEIERRLGITALDIYGLSEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPHDG
                     TPLADGEHGELLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRRMDRISGRSDDMLII
                     RGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKESSLTLTHEQRCQV
                     CHQLRHRIKSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA"
     gene            complement(31379..32584)
                     /gene="paaJ"
                     /locus_tag="RHX79_000754"
                     /gene_synonym="paaE"
                     /gene_synonym="ydbW"
     CDS             complement(31379..32584)
                     /gene="paaJ"
                     /locus_tag="RHX79_000754"
                     /gene_synonym="paaE"
                     /gene_synonym="ydbW"
                     /EC_number="2.3.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase"
                     /protein_id="HDV2195959.1"
                     /translation="MREAFICDGIRTPIGRYGGALSGVRADDLAAIPLRELLVRNPRL
                     DAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAAR
                     AIKAGDGDLLIAGGVESMSRAPFVMGKATSAFSRQAEMFDTTIGWRFVNPLMAQQFGT
                     DSMPETAENVAELLKISREDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVT
                     EIQHDEHLRPETTLEQLRGLKAPFRANGVITAGNASGVNDGAAALIIASEQMAAAQGL
                     TPRARIVAMATAGVEPRLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFAAQALGVL
                     RELGLPDDAPHVNPNGGAIALGHPLGMSGARLALAASHELHRRNGRYALCTMCIGVGQ
                     GIAMILERV"
     gene            complement(32584..33006)
                     /gene="paaI"
                     /locus_tag="RHX79_000755"
     CDS             complement(32584..33006)
                     /gene="paaI"
                     /locus_tag="RHX79_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyphenylacetyl-CoA thioesterase PaaI"
                     /protein_id="HDV2195960.1"
                     /translation="MSHKAWQNAHAMYENDACAKALGIDIISMDEGFAVVAMTVTAQM
                     LNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRH
                     QGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTITGEA"
     gene            complement(32996..34423)
                     /gene="paaC"
                     /locus_tag="RHX79_000756"
     CDS             complement(32996..34423)
                     /gene="paaC"
                     /locus_tag="RHX79_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase PaaC"
                     /protein_id="HDV2195961.1"
                     /translation="MMINVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRA
                     IDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHALAAANLVIEAASERLEVKKAL
                     FAQLAEVCPPQTLLTTNTSSISITAIAAEVKNPERVAGLHFFNPAPVMKLVEVVSGLA
                     TAAEVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDA
                     ALRDGAGFPMGPLELTDLIGQDVNFAVTCSVFNAFWQERRFLPSLVQQELVIGGRLGK
                     KSGLGVYDWRAEREAVVGLEAVSDSFSPMKVEKKSDGVTEIDDVLLIETQGETAQALA
                     IRLARPVVVVDKMAGKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWR
                     TVAMIINEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQH
                     HYGEERYRPCSLLRQRALLESGYES"
     gene            complement(34425..35213)
                     /gene="paaB"
                     /locus_tag="RHX79_000757"
     CDS             complement(34425..35213)
                     /gene="paaB"
                     /locus_tag="RHX79_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA
                     isomerase"
                     /protein_id="HDV2195962.1"
                     /translation="MMEFILSHVEKGVMTLTLNRPERLNSFNDEMHTQLAECLKQVER
                     DDTIRCLLITGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPV
                     ICAVNGVAAGAGATLALGCDIVIAARSAKFVMAFSKLGLVPDCGGTWLLPRVAGRARA
                     MGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGLGLIKQAINS
                     AETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFTGK"
     gene            complement(35213..35980)
                     /locus_tag="RHX79_000758"
     CDS             complement(35213..35980)
                     /locus_tag="RHX79_000758"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dehydroadipyl-CoA hydratase"
                     /protein_id="HDV2195963.1"
                     /translation="MSELIVSRQQQVLLLTLNRPAARNALNNALLTQLVNELEAAATD
                     SSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGY
                     ALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSG
                     ESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQALRQSQEVALQ
                     AGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFKGR"
     gene            complement(35977..37047)
                     /gene="paaK"
                     /locus_tag="RHX79_000759"
     CDS             complement(35977..37047)
                     /gene="paaK"
                     /locus_tag="RHX79_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate-CoA oxygenase/reductase subunit
                     PaaK"
                     /protein_id="HDV2195964.1"
                     /translation="MTTFHSLTVAKVEPETRDAVTITFAVPQPLQEAYRFRPGQHLTL
                     KASLDGEELRRCYSICRSYLPGEISVAVKAIEGGRFSRYAREHIRQGMTLEVMVPQGH
                     FGYQPQAERQGRYLAIAAGSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQA
                     LADLKDKYPQRLQLLCIFSQETLDSDLLHGRIDGEKLQSLGASLINFRLYDEAFICGP
                     AAMMDETEAALKALGMPDKTIHLERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIV
                     LNADDESILDAALRQGADLPYACKGGVCATCKCKVLRGKVAMETNYSLEPDELAAGYV
                     LSCQALPLTSDVVVDFDAKGMA"
     gene            complement(37055..37552)
                     /gene="paaD"
                     /locus_tag="RHX79_000760"
     CDS             complement(37055..37552)
                     /gene="paaD"
                     /locus_tag="RHX79_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate degradation protein PaaD"
                     /protein_id="HDV2195965.1"
                     /translation="MQRLATIAPPQVHEIWELLSQIPDPEIPVLTITDLGMVRNVTQM
                     GEGWVIGFTPTYSGCPATEHLIGAIREAMTTHGFTPVQVVLQLDPAWTTDWMTPDARE
                     RLRQYGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFD
                     YFKCI"
     gene            complement(37567..38313)
                     /gene="paaC"
                     /locus_tag="RHX79_000761"
     CDS             complement(37567..38313)
                     /gene="paaC"
                     /locus_tag="RHX79_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate-CoA oxygenase subunit PaaC"
                     /protein_id="HDV2195966.1"
                     /translation="MNQLTAYTLRLGDNCLVLSQRLGEWCGHAPELEIDLALANIGLD
                     LLGQARNFLSYAAELAGEGDEDTLAFTRDERQFSNLLLVEQPNGNFADTIARQYFIDA
                     WHVALFTRLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAID
                     KLWRFTAELFDADEIDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLNVPQEQAYRT
                     GGKKGLHTEHLGPMLAEMQYLQRVLPGQQW"
     gene            complement(38322..38609)
                     /gene="paaB"
                     /locus_tag="RHX79_000762"
     CDS             complement(38322..38609)
                     /gene="paaB"
                     /locus_tag="RHX79_000762"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit B"
                     /protein_id="HDV2195967.1"
                     /translation="MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYT
                     RRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM"
     gene            complement(38621..39550)
                     /gene="paaA"
                     /locus_tag="RHX79_000763"
     CDS             complement(38621..39550)
                     /gene="paaA"
                     /locus_tag="RHX79_000763"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit A"
                     /protein_id="HDV2195968.1"
                     /translation="MIQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIV
                     GMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGRM
                     KYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQR
                     QGFEACMALAQGSEAQKQMLQDAINRFWWPALMMFGPNDDNSPNSARSLAWKIKRFTN
                     DELRQRFVDNTIPQVEMLGMTVPDPDLHFDTESGHYRFGEIDWQEFNEVINGRGICNQ
                     ERLDAKRKAWEEGTWVREAALAHAQKQLARKVA"
     gene            39835..41880
                     /gene="paaZ"
                     /locus_tag="RHX79_000764"
     CDS             39835..41880
                     /gene="paaZ"
                     /locus_tag="RHX79_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation bifunctional
                     protein PaaZ"
                     /protein_id="HDV2195969.1"
                     /translation="MQQLASFLSGTWQSGRGRSRLIHHAISGEALWEVTSEGLDMAAA
                     RQFAIEKGAPALRAMTFIERAAMLKAVAKHLLSEKERFYALSAQTGATRADSWVDIEG
                     GIGTLFTYASLGSRELPDDTLWPEDELIPLSKEGGFAARHVLTSKSGVAVHINAFNFP
                     CWGMLEKLAPTWLGGMPAIIKPATATAQLTQAMVKSIVDSGLVPEGAISLICGSAGDL
                     LDHLDSQDVVTFTGSAATGQMLRVQPNIVAKSIPFTMEADSLNCCVLGEDVTPDQPEF
                     ALFIREVVREMTTKAGQKCTAIRRIIVPQALVNAVSDALVARLQKVVVGDPAQEGVKM
                     GALVNAEQRADVQEKVNILLAAGCEIRLGGQADLSAAGAFFPPTLLYCPQPDEAPAVH
                     ATEAFGPVATLMPAQNQRHALQLACAGGGSLAGTLVTADPQIARQFIADAARTHGRIQ
                     ILNEESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRAVKHYMQRTAVQGSPTMLAA
                     ISKQWVRGAKVEEDRIHPFRKYFEELQPGDSLLTPRRTMTEADIVNFACLSGDHFYAH
                     MDKIAAAESIFGERVVHGYFVLSAAAGLFVDAGVGPVIANYGLENLRFIEPVKPGDTI
                     QVRLTCKRKTLKKQRSAEEKPTGVVEWAVEVFNQHQTPVALYSILTLVARQHGDFVD"
     gene            42128..44401
                     /gene="tynA"
                     /locus_tag="RHX79_000765"
     CDS             42128..44401
                     /gene="tynA"
                     /locus_tag="RHX79_000765"
                     /EC_number="1.4.3.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primary-amine oxidase"
                     /protein_id="HDV2195970.1"
                     /translation="MGSPSLYSARKTTLALAVALSFAWQAPVFAHGGEAHMVPMDKTL
                     KEFGADVQWDDYAQLFTLIKDGAYVKVKPGAQTAIVNGQPLALQVPVVMKDNKAWVSD
                     TFINDVFQSGLDQTFQVEKRPHPLNALTADEIKQAVEIVKASADFKPNTRFTEISLLP
                     PDKEAVWAFALENKPVDQPRKADVIMLDGKHIIEAVVDLQNNKLLSWQPIKDAHGMVL
                     LDDFASVQNIINNSEEFAAAVKKRGITDAKKVITTPLTVGYFDGKDGLKQDARLLKVI
                     SYLDVGDGNYWAHPIENLVAVVDLEQKKIVKIEEGPVVPVPMTARPFDGRDRVAPAVK
                     PMQIIEPEGKNYTITGDMIHWRNWDFHLSMNSRVGPMISTVTYNDNGTKRKVMYEGSL
                     GGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIARGRDAPSNAVLLNETIADYTGVP
                     MEIPRAIAVFERYAGPEYKHQEMGQPNVSTERRELVVRWISTVGNYDYIFDWIFHENG
                     TIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDV
                     DGENNSLVAMDPVVKPNTAGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRLLSNLNKE
                     NRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHRLSFMDKQLWVTRYHPGERFPEG
                     KYPNRSTHDTGLGQYSKDNESLDNTDAVIWMTTGTTHVARAEEWPIMPTEWVHTLLKP
                     WNFFDETPTLGALKKDK"
     gene            complement(44459..45958)
                     /gene="feaB"
                     /locus_tag="RHX79_000766"
                     /gene_synonym="maoB"
                     /gene_synonym="padA"
     CDS             complement(44459..45958)
                     /gene="feaB"
                     /locus_tag="RHX79_000766"
                     /gene_synonym="maoB"
                     /gene_synonym="padA"
                     /EC_number="1.2.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetaldehyde dehydrogenase"
                     /protein_id="HDV2195971.1"
                     /translation="MTEPHVAVLSQVQQFLDRQHGLYIDGRPGPAQSEKRLAIFDPAT
                     GQEIASTADANEADVDNAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQHSEELA
                     QLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTR
                     KEPVGVVAGIVPWNFPLMIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGI
                     PDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKGIARTAADHLTRVTLELGGK
                     NPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQ
                     VGPGMSPVAQINPVVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAGEGYYVAPTLVVN
                     PDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNLSQALEYSDRL
                     QAGTVWVNSHTLIDANLPFGGMKQSGTGRDFGPDWLDGWCETKSVCVRY"
     gene            46194..47099
                     /gene="feaR"
                     /locus_tag="RHX79_000767"
     CDS             46194..47099
                     /gene="feaR"
                     /locus_tag="RHX79_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FeaR"
                     /protein_id="HDV2195972.1"
                     /translation="MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLETHFAKGL
                     KLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDA
                     SRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPVCAERLDADLPMVQLSHRLLQESMN
                     NPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEW
                     IAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFS
                     DQSHFSTVFKQRFGMTPGEYRRKFR"
     gene            complement(47271..47600)
                     /locus_tag="RHX79_000768"
     CDS             complement(47271..47600)
                     /locus_tag="RHX79_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707676.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HDV2195973.1"
                     /translation="MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVA
                     LKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGIN
                     GKWVRKF"
     gene            complement(47605..47790)
                     /locus_tag="RHX79_000769"
     CDS             complement(47605..47790)
                     /locus_tag="RHX79_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HDV2195974.1"
                     /translation="MKILLAALTSSFMLAACTPRIEVAAPKEPITINMNVKIEHEIII
                     KADKDVEELLETRSDLF"
     gene            complement(47787..50426)
                     /locus_tag="RHX79_000770"
     CDS             complement(47787..50426)
                     /locus_tag="RHX79_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH family protein"
                     /protein_id="HDV2195975.1"
                     /translation="MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRI
                     ALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGMVELDSACLAKL
                     PQTEQSPAAPKTLAQWQSMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGE
                     KVKFQGQLKGQQLTVSELDVVAFENQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQ
                     EPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLS
                     GRLGVKVDNWQAGLENALVSGRLSVLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTG
                     EAKQADLILYARLPAQLSGSLTDPTLAFEPGALLRSKGRVIDSLDIDEIRWPLAGVKV
                     TQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATW
                     DVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPVVWVRDAQHPSFSGAL
                     SLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYFLFKGDLHAGEIGPVRVNGRWDGIRLR
                     GNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAW
                     MPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTE
                     EEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAF
                     SGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVKDNMTAGSAINWLRYMEIS
                     RSSTKINLDNLGLLTMQANITGTSRVDGKSGTVNLNYYHEENIFTLWRSLRFGDNLQA
                     WLEQNARLPGNDCPQGKECEEKQ"
     gene            50634..51623
                     /gene="ldhA"
                     /locus_tag="RHX79_000771"
     CDS             50634..51623
                     /gene="ldhA"
                     /locus_tag="RHX79_000771"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDV2195976.1"
                     /translation="MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANG
                     CEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDP
                     EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAML
                     RILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEA
                     AFDQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVI
                     QDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCPNELV"
     gene            51734..52156
                     /gene="hslJ"
                     /locus_tag="RHX79_000772"
     CDS             51734..52156
                     /gene="hslJ"
                     /locus_tag="RHX79_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HslJ"
                     /protein_id="HDV2195977.1"
                     /translation="MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKP
                     VTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELD
                     NTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN"
     gene            complement(52153..52419)
                     /locus_tag="RHX79_000773"
     CDS             complement(52153..52419)
                     /locus_tag="RHX79_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015964583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HDV2195978.1"
                     /translation="MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEA
                     NCAMIGGSLSVARQLDGTAIGMCALPNGKRCSEQSLAAGSCGSY"
     gene            52693..56217
                     /gene="nifJ"
                     /locus_tag="RHX79_000774"
     CDS             52693..56217
                     /gene="nifJ"
                     /locus_tag="RHX79_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HDV2195979.1"
                     /translation="MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGL
                     KNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTP
                     FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSR
                     VPFIHFFDGFRTSHEINKIVPLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANP
                     DTYFQSREATNPWYDAVYDHVEQAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAI
                     GTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAE
                     PLYLDVMTALAEAFNNGERETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARF
                     TVGIYDDVTNLSLPLPENTLPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ
                     GYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGG
                     IFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAF
                     FHLTQILPGDSALAELQGAIAKSYSSKGQDLVERNWQALALARESVEEVPLQPVNPHS
                     ANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIP
                     IWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQV
                     APEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKL
                     ERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLP
                     STPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLT
                     ALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFG
                     GLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMM
                     MYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQL
                     TATGFWPLYRFDPRRADEGKLPLALDSRPPSVALEETLLHEQRFRRLNSQQPEVAEQL
                     WKDAAADLQKRYDFLAQMAGKAEKSNTD"
BASE COUNT        14228 a        14858 c        13441 g        13829 t
ORIGIN      
        1 gccgcttcgt gttgtggcaa aaaaagtgtt ggtgaaaata aatttttcag ccccttttca
       61 gacgacatag tcaatgccga aaaaggggct aagtcaatca tcagtagtta aatttcagta
      121 agttaagctg ctaaaaaact tcgactactg tgattaattt cacatccctt cgataaaaaa
      181 tatgcttacc gaaaagaaga acagtaaatc atctcagcgt ggggaatttt cacgcgcctt
      241 attcttagcg ggtcattttt tacgtgccag catcgtggcg aaacgcagtt taatacgatt
      301 accgttggcg tcggtgcggt gcagctcgcc gacgtcttca ttgtatttca ccctctccca
      361 gccttcgtaa tatcgacgta attctccctc tttgaaggca aacgggaagc cgacggtaca
      421 tggataatca gcggtatcca tcgccgccac aatcaggttg taaccaccag gtttagtgca
      481 acgttgcata ttggcaatca gccctgggat ggttttagcc tcaaggaaca tcagtaccac
      541 agtcgaaaga ataaaatcgt actgtctatc aaatgtgagg ttattcagat caacgacccg
      601 ggtgtgtaaa ttatccagat tttcaatgga tttaatgcgc tctacattgg cgatactcat
      661 ggcattttta tcccatgcgt caacatcata accattggct gccaggtaaa gactgttacg
      721 accattgcca cagcccagat ccagcgtttt acccggttta accactttca ccgcttccag
      781 tacttcagag tgtgtgcggg ttaattcata tttatcagta aaatagtttt cgtcacgaat
      841 gatcattctt tgtcctctgc tttcattaaa acggcgcgct cggttctgac taacaatttt
      901 ccctgcatca gaagcgcaaa agtacggatg agcagtattg caataataaa attggtaaag
      961 ataaacagcg gtaccgccag cgtatggaaa aatccatttt cgctgccact ccccagatgc
     1021 aaaccggtgg ttgccagtgc agatacgccg aacgagaaac tccagaatga agcattaaat
     1081 ggctgggaga gataccatgg catcagacgt agcataaaca gcagttgcag cagtccataa
     1141 ccaaaaagca ttttcgccag cgtatcaccc tcgccgccgt tgacgctcaa ccaagcacta
     1201 caggccacca gcgcaggagc gagctgaatg ccgagtgatg tccgcagtgc cgtgggtaat
     1261 tctcccgaac tgcgcagacg ctgcaagatc acaggttcaa ggcttagcca tgagaaaacg
     1321 cctgcgccta aaaacaccag accggcgtcg gtgtagccca acgcaccaca ggccattgcg
     1381 ctgataaagt tgttggcaac tgtcggcaga tacagtccag gcgtggtagc ttcttcaggg
     1441 tgagatccgc gccataatcc cgcagtttgc caggcggcat aagccaactg aaccacgaca
     1501 ccaaaactga acaggcacac cgccagtggg cgaaaccacg gaacaaaacc aatcgccacc
     1561 agcatcgtcg ttgccggaaa caaactcaca aaactgctca tcactggatg gcgcacttct
     1621 gccagcacgc tatgcggaaa gcgtatgagt cgggtaataa atgcgctagt taacaatccc
     1681 cagatgatca tcgccagaat caccagccca tcccctaacc agtggctgac ctgccaaacc
     1741 tggctggcat agcgccaggc aaatcccatc cctatcgtcc ccaacacaat accaaagtag
     1801 cctgccggca aattgagcac tttatcgctc tgcatcttct tactcatttt gtttaattta
     1861 taaagtatat ttgaaatgca ttttatggaa ttttctcgag catagccaga gccgcagaat
     1921 ttgctacggt tatagtaagt cacctgtggg aaaacgctat gcgcaaatat cgtctaagtg
     1981 aagaacagcg agcctttagt tatcaggaag atggcactaa aaaaaatgtg ttattacggc
     2041 agattatcgc cattagcgat tttaacgatg tgatagcagg aaccgctggc ggctggatcg
     2101 atcgcgaaac ggtgttagca caggaaggaa attgctggat ttacgaccag aacgctattg
     2161 cgttcggcgg agcggtgatt tccggtaata cgcgcatcac cggcaccagc gtgctgtggg
     2221 gagaggttta cgcaacggat aatgtctgga tcgataatag tgaaatcagc cagggtgcat
     2281 atataagtga cagcgtcacc attcatgact cactggtttg cgggcaatgt agaatatttg
     2341 gtcacgcctt aattaatcaa cattctatga tcgtcgcagc acaaggctta acgcccgacc
     2401 atcaactcct gctccaaatt tatgatcgcg caagggttag cgcctcgcgt attgtccacc
     2461 aggcacaaat ttatggcgat gccgtcgtcc ggtatgcttt tattgaacat cgcgccgaag
     2521 tttttgattt taccagtgtt gaaggtaatg aagagaacaa cgtctggcta tgcgattgcg
     2581 ctaaagtcta cggtcacgcg caggtgaaag ctggcataga agaagatgcc attccgacga
     2641 ttcattacag ttcgcaggtg gcggaatatg ccattgtgga aggtaattgt gtgttaaaac
     2701 atcatgtctt gattggcgga aatgccgtgg tacgtggtgg accgattctg ctcgacgagc
     2761 acgttgtaat acaaggtgag agccgtattt caggtgcggt gataattgaa aaccatgtgg
     2821 agttaaccga ccacgccgtc gttgaagcct ttgatggcga cacggttcat gtccgtggtc
     2881 caaaagtcat taacggcgag gagcgcatta cgcgaacgcc gctggcaggg ttattatgaa
     2941 tcgataatac gcgcgtataa gttcacatca tcataggcat cattcaggaa ctcagcctgt
     3001 ttcaggcaac cttcaaggat aaaaccattg cgcaaagcga cctggttgct ttgcggattg
     3061 tccacccgac atttgatcac gaagcgtcta agttcaccag actgagcgta atgatgaatc
     3121 aatgcctgca gcgcctgaga aatgatcccc tgcccctgat gagattcgtc cagccagtag
     3181 ccgatttcag cagttttatt cagtggttca atacgattaa acgagataac gccgataagt
     3241 tcatcttctt tgaaaatcat gaacattttg gcatagccgc gttgatgcaa catcacatta
     3301 ccctgcaccg tttttcgcgt gtcctcttca ctctgaacga actgcggcca gtttagcgac
     3361 tgctgtaacc aggttttatt tttacagatt aactgataaa gaggtgtgac gtgactttcc
     3421 gcaacagcat gtaattcaag tgattcgctt acttttatcg tttcagtcat cttatctcca
     3481 gtcaatccat gctgttgtta aaaaagccgc ctggctggcg gcttaggaaa gtttacacct
     3541 ctttgacgct ctcctgctgc aggattttga gcatctcatc ttttaactgt agcttttgtt
     3601 ttttcatgcg gaccacttcc gcattgtacc ctcgaccgtc ggaaccttcc tttctggcaa
     3661 tttcatgatc aagtttattg tgtttatcga acaaggacat aaagcgagga ttttcgtttt
     3721 tcagacggga tattaaatct cggtattctg gaaacatacg cactccctgt tagtggctga
     3781 caaggtgtat ctgaaataca caccatcaga ttactcattt aacttaggga aaaatgcgag
     3841 cgggatcgtg tttaaccaga cggcacctcc cgaagaaggt gccgaagaaa aaacgattaa
     3901 ctcatcacgc ggtcgtcaac atactgacgt ttatccggcg ctggcgggaa atactgatac
     3961 agccatgttt cactgatagc gtccccctga caacgtagat acatccgcat atcgaccgga
     4021 tcagtggagt ccgaagtcgg ataccagtca aactgaatac gataaccatc gatgggttca
     4081 atatagagaa tttcgatttg cttcgcttcc ccactggaaa gcgtaatcac cggctcaatg
     4141 ccttttggcg cggcagcttt cagatcacca ccaacgaaat cgacggcaaa acgacgcgcc
     4201 catttttcgg gatagtgttc acctggcgcc caaccttccg ggaaaccgcc catgccggta
     4261 cgcgtcgcca taacgcgcgc taatgggcaa tgaacaggcg gttgcgcact ccagtacaga
     4321 cgatactgga atgcaaactc atcacctgct tttacagctt tttctggctg ccagaagcag
     4381 acaatgttat ccagcgtttc gcccgttgtt gggatttcca tcaggccgat ggtgccctta
     4441 ccccacttgt tacgcggttc cacccacaga cttgggcgtt tgttatacca gcccataatg
     4501 tcctgataat gggagaagtc acgatccagt tgcaataaac caaacccttt cgggttgttg
     4561 tcggtgtaag cattgaactg caatttttgc ggattattca gcggacggca aatccactcg
     4621 ccgttgcccc gccacatgga cagacgatca gagtcatgaa tttgcggatg aattgtatcg
     4681 cacatccgac gttcattagt accgcagctg aacatactgg tcatcggcgc aatgcccagc
     4741 tgtttaatgt ctttgcgcgc atacaggtga ttttccacat ccataatcac ctgacttttc
     4801 tcacaatgga tagtgaactt ataggcacca gtaatgctgg cgctatcgag caacgcataa
     4861 acggtaaagg tagttgcccc cggttttacc gtatcaaacc agaaggcggt aaagtcgggg
     4921 aactcttctt tactgtcggt gtaagtgtcg atcgccaggc cgcgggccga caaaccgtat
     4981 tgatatgtat catcaacggc gcggaaataa ctcgcgccga gaaatgatac tacatcacgg
     5041 cgcgccagtt cgggggcttt aaacacgcga aaaccggcaa agccgagatc gctttgccct
     5101 tctaattgtt tggtatcaac acccgcatcg ttgtatttga acaactccgg gcgaaagtga
     5161 atttcacgcg ccagatgtgt tgctggatct acagaaaaca tacgaacgcg gcgacggaat
     5221 cccattccca tatggaagaa ctgagcgtcc agttgacggt tctcaacgtt atgccagagc
     5281 gatttttcgg cgtcgtattg aatactgtta taagcctgcg gcgtcattgt cgccagcgtg
     5341 tcaggtaacg gacgaggcgc accacgccac gctgtttgcg ctaagtcgtg cgccattgac
     5401 tgtagaatgg agaagtcaaa acgctgggtt tgcccgtcgg caatatcaga atctgccgcg
     5461 aatgccgcct gagaaaaaag agaagcaatg ccgctggtac cgcacacggc ggccatagcc
     5521 attgaacctt taataaatcg tctacgatcc atacctgaaa gtgagtcctt ctggtgttgt
     5581 gaatggtccc gcgctggtcg ttttcagcgg caagaaagtg cttatttatg accgctcact
     5641 ctagacaata tttattaata atccaattgt tgaactgaga gaatatgcat aaatcggcat
     5701 tttttttatg tcgatgggat gagcctgatt cgtttgtaaa atcaggcaaa tttttgcaaa
     5761 ggcggatggt cagaatttaa agcaaaccac agcgacgttt actgcgttct tccgcttcct
     5821 ggtaaagctg gaactcatcc aaaaccggac aacccaacgc ctgctcaaat gcttcgcgac
     5881 tggcattacc gtgactgcgt gtctgcgttt cattacccag atttgactgg aagatccccg
     5941 ccgcgctaac gggcaagaaa tcttcatagg tgatgggttg cgccactacc caaccacgtt
     6001 caattaaggg ctgtggatcg tctccaggat gaatcgcctg acgatgcgcc tcacccgaag
     6061 gcgtcagacg gtaccggaac catgccaacc cttgctgacg cattaaaaac tcactgtcag
     6121 gaaaagtgcg gaaggtatcc tgtaaatgca tttggtgagt gagattatcc tgcccggttc
     6181 cagcgttacg cagaagatca tcatacagtt gtcgcccttt cggcgttaat gccacgccac
     6241 gctgctcaat ttcaccaaag cgcgcggtat gcgtgccctg tttctgcccc gcaaacaaca
     6301 ccgtctcttc cagtgcttta aagctggtct ggcgtagtaa aatcggtacc tcgcggcgcg
     6361 gcggcccctc gatgagaatt ttgggttcaa ttccgcattc aggcatcatc gactgcaccc
     6421 ggtcaatatc cagcgtacgt ggcgtcaggt ggttgatatg gcatccagga aaacagacca
     6481 catcagcaat caaccgatgt tcgttgtgca aggcgcgata ggtttcttca tctaccgttg
     6541 ctgactggtg ccagcgaaac gtttccaggg cttcctgcac aaactcctgt gcctgtgttt
     6601 cgttaaaacc gccctgctgc tcatattcct ctaacagttg tcgacaacgt ggggtgaaga
     6661 tatcgcgctg acgcagaatc tccgccgctt tctggcgcaa aatttcgttc tcgataagct
     6721 caaggcggag taaggaggta aaaacgcgga agggattacg cgccagagaa gcatcatcaa
     6781 tgggccgaaa tgctgtcgaa tgtaccggca cccctgcctg cgagagatcg taatagctca
     6841 ccgggtacat ccccataatg gcaaacatcc gccgaagagt agcaagctct tgtgcagtcc
     6901 caacgcgaat cgccccatga cgttcaacat tcagtcgcgc cagctcgtct gcgtttacca
     6961 ttttttcgtg cagttgagga ttgttttcca gcacagccag attcacatca gctaccagtt
     7021 ccagcagcgt gccatattgc ggaacttctt gctggtacat ggctgacatt gcctgcgaaa
     7081 actgttcccg aatctcatcc gccgtgatgc tgttcgccat agtgtctgcc tccagtggtc
     7141 agtaatctgg agtgtaggta accgcattca ctctggcggg aagaatttac aaactgtgat
     7201 ctcgccgcga aaacatcaat attatccatt ttgctgtaac ataattgctt taattgttaa
     7261 taatattttg caatcaagtt atcataatca aacaacttca cttgtcagcg acaccgcttc
     7321 gtttttaaca tcgcttatgg aaaaaaatag tctgtttagt cagcgcatcc gtttgcgcca
     7381 ccttcataca ttcgtagctg tcgcacaaca aggaactttg gggcgcgcgg ctgaaaccct
     7441 taatttgagt caacctgcgc tctctaagac attgaatgaa ctggagcagc tgactggcgc
     7501 tcgcttgttt gagcgtggtc gtcagggggc gcaacttacc ttacccggcg aacaattttt
     7561 aacgcatgca gtcagagttc ttgacgccat caacactgcc ggacagtcgc ttcatcgtaa
     7621 agaagatctt aataatgatg tcgtcaaggt tggtgcacta cctactgcgg cactggggat
     7681 attaccttcg gttataggtc agtttcatca gcaacaaaaa gagacgacct tgcaagttgc
     7741 gacaatgagt aaccctatga ttctggcggg tttaaaaacc ggggaaatcg atatcggcat
     7801 tggtcggatg tcagatcctg aactgatgac cgggcttaat tacgaactgc tgtttcttga
     7861 atcgctgaag ctggttgtcc gccctaatca cccgctactt caggagaacg taacgctaag
     7921 ccgggtgctg gaatggccgg tcgttgtatc accagaaggc actgcgccac gccagcattc
     7981 agatgcatta gtgcagagcc agggctgtaa aattccttcg ggttgtatcg aaacgctgtc
     8041 tgcttcgcta tctcgtcaac ttacggttga atacgactac gtgtggtttg tcccttctgg
     8101 cgcggtaaaa gacgacctgc gtcatgccac gctggtggcc ctgcctgttc cgggacatgg
     8161 tgcaggcgaa ccgattggaa tactgacccg cgtagatgcg acgttctctt ctggttgcca
     8221 gttgatgatt aacgctattc gaaaatcaat gccgttctga aaggtgaagg gatctgtcga
     8281 tccctccttg aacattttca caccgtagcg aaactaactg gttcacccgc tccgcgaggt
     8341 tctgccgaca cagaatgttt gttcagacgg aatacgtcca ccgcctcagt taatcgtgcc
     8401 gcctgttctt caagggacac cgccgctgct gaggcctctt ctaccagaga agcattctgt
     8461 tgcgtcacct tatccatttc agaaatcgcc tggctaacct gagttatgcc tctactttgt
     8521 tcatccgagg cggcggcgat ttcctgcatg atatgtgtga cactcgcgac ggcatcaaca
     8581 atagtgctca tggttttccc tgccgttgcc acctcatccg accccaggtc aattaacctg
     8641 actgattcac tgatcaagcc ttcaatctct ttcgccgctt gggcgctgcg gcttgcgagt
     8701 gtccgtactt cgctggcgac aacggcaaat ccacggcctt gctcacccgc tcgcgcggct
     8761 tcaacggcag cattcagtgc cagaatattc gtctggaaag caatactgtt gatgacggcg
     8821 gtgatctcgg aaattttctt cgaacttgta gagatagcgc ccatcgtttt tactacaccg
     8881 gaaaccgtct gcccgccatc gctggcttta atagaagcct cttgcgccag tttgctggca
     8941 tgatgcgcgt tatccgcatt ctgtttcacc gtcgcagtga gttgctccat gctggcggca
     9001 gtttgttcga tagccgccgc ttgttcttcg gtgcgagatg acaggtccgc attgccagct
     9061 gaaatttcgc tggtgccacg ataaatctct tccgcgccct gtcgaacagt ccctactgtc
     9121 atccccagtg aatgctgcat ttgctgtaaa tgacgactta agcgaccgat ttcattacga
     9181 cccgcaggtt catcattcat cgtcagatcg ccactggcga ttttttcaat ccgttgtgcg
     9241 gcatgttgca gtggacgaat gacgatccga cgtagcacca taaatgttat cagcgtcatg
     9301 accagggcaa gcacaaacgc gccaatcatg aacatcccac ccaggcgggt gcgctgatgg
     9361 gccagttccg ccagttggtt ggctctggtg ctacgtatct taacggcttt gttcaaaata
     9421 tcggtataag cattatccag cggtcggatc tgctcacttt catgattgat aatcgcttca
     9481 aacatgccat ttttggcata tttcaacata ggttgcatac ccgtgatata agcctgaaag
     9541 cgttgattta attcagtgtc gagggcttca tcagcaggtg ttttcaccgg ccgattctga
     9601 taagcacgat aaccttgctg cgactgttta atctccgatt cggcttgcgc aatattgcgc
     9661 ttcattgctt ccatttccgc aatacgactc gcagccccgg cctgaatcat attgatccgg
     9721 gctgaacgca aaaaatctga actgttcgct aacccggtcc gaatctcaat ctccgcagta
     9781 acatcacgct gatcgcgatc ggcctgccag aggaaatagc cagccagagc agaacttaat
     9841 gcgaatagaa ctaagatacc gccaagaatg caggcaaata acggaaccag cctgatgtga
     9901 tgcaaaaaac ctaatcgctg tgagggagtt gtattcatta ccgttgtctc tcgtccaggt
     9961 ttactcctga tagaaagtca tcggcacttg acggtaatta cttatgacca aaaacctctt
    10021 tgcgtcacat ttttacaaca attattgcag agaaaattaa tgctattgga atgaagagag
    10081 taacgaatgg ctaaactggc taacccgaat gacgaaaaat tctggaaaac agcacgcaat
    10141 ttcgtgaagt gattattttc gtccctaagg aaacctcata ggatgcctgc gggtgcctga
    10201 gactttctgt tttcaggcta accgggaatc agaaagacga aggccccgac cgatatttct
    10261 atcaaccgag gccaacgaat gaacctagca attcagatct tagcctctta cccgccatcc
    10321 ggcaaggaga aaggctatga agcacaaccc tctggtggtg tgtctgctca ttatctgcat
    10381 tacgattctg acattcacac tcctgacccg acaaacgctc tacgaactgc ggttccggga
    10441 cggtgataag gaggttgctg cgctcatggc ctgcacgtcc aggtaagggc aagcgcgggg
    10501 attttccccg cgcatctgac tagcagattc attttctcat ggcacccctt ttacacttca
    10561 gttagtgcat gtttttttcg aggcactaat agaaccatca ttacagacaa atttgccgcc
    10621 tgccgtacag tgtgagatcc cccctttcga accagaacag ggtttgcgcc cggcatcggc
    10681 ataaaaggaa acaagcgttc ccataaacaa aataagtgcc agttttttca tataacctcc
    10741 atggtttatc gaatcttatg ttcgatttga acgttatacg ctggtttatt ttgataccgt
    10801 tgatgagatc aaagatcggg tgaattgatt aaaaataagc cagatggacg tatgggcaag
    10861 gattatggtt ttatttgtca tacaaataaa tataataggc gcttccgatg tagacccgta
    10921 ttcttcgcct gtaccacggg tcggttttag tacaggcgtt ttctttaaat atccttcagg
    10981 aacgtttacg cggcatcatg cgtagaagtg tgttgtcctt ccagaaatag tggtgtgcca
    11041 gtgcagccgc agcgtgcaac ccgatgacaa aatatcccag attcgccagc gtctcatgcc
    11101 acgactttaa gctatcaacc cgttcgaaat tggcctctga agcgtaaggc atcgtcaaac
    11161 caaacgcaaa ccacgggttg ccccggttat acatcatcac caaaccaatc actggcagcg
    11221 caataaacag gagataaata accaaatgtc ccaaatgcgc cagtcccgtc atcatcggtt
    11281 ttggcttagg tataatcggc ggggttgggt atttcagcct taacaaaaga cgaacgacca
    11341 tcagcacgag aattgagatg ccgcaggaaa catgaatcat gttgatgagt ggccgatcgc
    11401 tacgtgggaa gaaaccccga aactccattg cgcaatacgc tgcgataacc agcaaaaaga
    11461 ccagccagtg aatgctgatt tgtaaccttg agtatttatt ttccataaca tttcctgctt
    11521 taacataatt ttccgttaac ataacgggct tttctcaaaa tttcattaaa tattgttcac
    11581 ccgttttcag tacgttacgt ttcactgtaa gaatggagat tgcccatccc acaatcctgg
    11641 tctaagcctg gaaaggatca attttcatcc gaatgttcct gacaggagaa aaccatgagt
    11701 aaagttggta ttaacggttt tggtcgtatc ggtcgactgg tgttgcgtcg attacttgaa
    11761 gtcaaaagca acatagacgt tgtcgctatt aatgatctca cttccccaaa aattctcgcc
    11821 tacctgctga aacatgattc aaactacgga ccattcccct ggagcgttga ttttacggaa
    11881 gattcactta tcgttgatgg gaaaagtatc gcggtttacg ccgaaaaaga ggctaaaaat
    11941 attccgtgga aagcgaaagg tgcagaaatc attgtcgaat gtactggctt ttatacctcc
    12001 gccgagaaat cgcaggcgca tcttgatgct ggtgcgaaga aggtgttgat ttccgcccct
    12061 gccggtgaaa tgaaaactat cgtttataac gtcaatgacg acactctgga tggcaacgac
    12121 accattgttt ccgtggcgtc atgcaccact aactgtcttg cgccgatggc caaagccttg
    12181 catgacagtt tcgggataga agtcggcacg atgacgacca ttcatgccta tactggcacc
    12241 cagtcactgg tggatggccc acgtggtaaa gatttacgtg cttcacgcgc agcggcagaa
    12301 aatatcattc cccacactac gggggcggca aaagccattg gtctggtgat cccggaactg
    12361 agcggcaaac tgaaaggtca tgcgcaacgc gtgccggtga aaacaggttc ggtcactgaa
    12421 ctggtatcga ttctcggaaa aaaagtgact gccgaagagg tgaataacgc acttaaacaa
    12481 gcaaccacca ataacgagtc atttggttat accgatgaag aaatagtctc ttccgatatc
    12541 attggcagcc atttcggttc ggtgtttgat gccacgcaaa cggaaattac cgccgtgggc
    12601 gatttacaac tggtgaaaac ggtcgcctgg tacgataacg aatatggctt cgtcacgcag
    12661 cttattcgca ccctcgaaaa attcgctaaa ctctgacgcg cacaggcgga ggaaaaaacc
    12721 tccgcctctt ttactcatta cgactgtaaa taaaccacct gggtctgcag atattcatgc
    12781 aggccatgtt taccatctgc gccgccaata ccggatttac gccatccggc gtggaagcct
    12841 tgcatagctt cgaagttttc acggttgatg taagtttcac caaacttcag ccctttaatg
    12901 gctttcatcg cgacgttcag attttgggta tagattgatg aggtcaggcc gtaatcactg
    12961 tcattagcca ttgagatagc atcttccagc gtgtcaaatg cgaccaccag cagaaccggg
    13021 ccaaaggttt cctcatgcat aatcgacatt tcctggcgaa catccagcag caatgtcggc
    13081 ggataataat atcctttccc gtctactgct ttgccaccca acgccactct cgccccttct
    13141 tctactgcgc gcgccacttt ttgctcgacc ctttccagcg ccgcggcgtt aatcaacggc
    13201 cccatcgcaa tgtcgttgcg ttcagcgggg ttaccaaatt gaaccgcctg catcgcttca
    13261 cccagccgat tgacgaactg atcataaatg cctttctgta cataaacacg ttctgcacag
    13321 ttacacactt gcccactatt aatgacgcgt gaatcaacga tggctttgac tgccagttca
    13381 agatcggcat cgtccattac gatagctggt gctttaccac ccaattccag acacactttg
    13441 gtgatgtttt tcgccgcagt cgccataatc ttttcacctg cagagacgct gcctgtcata
    13501 ctgaccattg cgacctttgg gttacccgcc agttcttgcc caacggtttc accacgcccc
    13561 agtacaaggt taaacacgcc gcgcggaagg cctatttcat cgacgatttt ggcgaatgca
    13621 atcgcattgt ttggcgtaaa ttcactgggt ttaatgacaa tggtattacc agtcaaaaga
    13681 gcgggagcca ttttgcgggc aatgaggaag aacgggaagt tccacggcag aatgccggta
    13741 gtcacaccaa gcgcacgttt aaacagaaga atattttctc ctggacgatc gctttgaata
    13801 atctcgccct cgtaacgccg tgcccactcc gccatgtaat cgatatagtc ggcagtaaaa
    13861 gccacttcga cttcagccag ctgctggatc ttgccccctt cttcaacaat cagcgcactg
    13921 atttcactgg cgcgctcgcg gatcccggcg gagattttgc gcaaccaact ggcgcgttca
    13981 attgcaggca acgcttccca ttctggttgt gcacgttctg ctgcatcgat tgccttacgg
    14041 gcatcctcgg cctgaccatc gggaatgcgg gaaatgacag cctctgtagc agggtttacc
    14101 acatcaatcc atgcgtctcc acgccaggta acaaactgtc catcgatata cataggatgt
    14161 tgaacgggta ctgacatggg cgactcctgt gatttatatg tttgttttcg gtgaatacat
    14221 tgttaattaa catcaatcat cagagagacg gcatcgtgaa aggacaattc tgtgaagggc
    14281 ttcataaaaa caagtgtaaa aggaataaaa ggcagaaata aaagtcagga gtcatgcccg
    14341 tttgcaaaca agtggttcac aaacgggcaa tttttaacgt aacgagcgac tttccatcgc
    14401 ctcgatgagc accgcatcgt gtttaagcgt ttgccatgca tggatgactt ctgccggaaa
    14461 atcaacgtga acgataaaat ctcgcccgcg gggaccgtag ccatcgctat catcgcgtaa
    14521 acgcggcagc tcgccagtga gtagtgagag ataacgctca accggccata atccttgcaa
    14581 cggattaaca aagattacac tgtctgcgtt atttcctaac tgaggaacga atccgggata
    14641 acttaaccag cgtggtgcat cgggattgtc cccagtcata cggcggaacg tcgccatcgt
    14701 gcgccgctgc atggtggggt cctgaacaac gatagccgta tgaactcgtt ctacggcctg
    14761 attcaatagt gcgatgctaa agcgtgcgtt ttcaccgcag tttgttgact ggtcttcaat
    14821 ccagattttt tcatgcggaa tgtgccagaa ctgatgagcg atatccgcca ggatggtcgc
    14881 ttctgctctg ccagtggtgc ggatagtgtt gtagtgcgga tgctgtgcga tggcgctata
    14941 caaaaaagtt gtcgagtgac cgataccacc actaatcagt aaaggaattt gctgatcgcg
    15001 ggcaatctta catgccgcat ctatagtcgg cataaccgca ttgcctgcaa ggatcacgca
    15061 atcggcctga tacggcacct caccggagaa atcatcctgc gccagccact gtccgataac
    15121 atttatggca tctatggttg ccgtcgaaag cgtcggaaac ggggtaatgt tcatggttcc
    15181 tccttatcgt tcccttaaga atactgcgtg agataatagt gagaagcgga gcactctgaa
    15241 aggaggaagt cgtatgtcct taaccgccac tccgcaagcc tgacatatct tttaaggaaa
    15301 tgctgtagat aaacattatt catcttgcag cagagaattg tatttttctg aattcctgaa
    15361 tttttaccct taccgtttta gaattaataa aaaacccggc gctaaatgct taccgggttt
    15421 tagatttatc aggcaaatag cagtgttaac cgctaatctg ctccatcgcc tgcaaaatac
    15481 gcttatctga aatcggataa ggtgtaccaa gttgttgagc gaagtaacta acgcgcagct
    15541 cttctatcat ccagcggatc tctttcacat cttcatcctc acgacgtgcg ggcggcagtt
    15601 tgttgatcca ttgctgccac gcctgctgga cgttttcgac tttcagcatc tgtgcacggt
    15661 cgcgatgtgg atcaaccgcc agtttttcca gccgtttttc aatcgcctgc aaataacgca
    15721 gcgtgtcgcc cagccgtttg aagccgttac cagtgacaaa accgcgatat accaacccgc
    15781 ccatctgcgc tttaatgtca gaaagcccca gcgccatggt catatccacc cgccctttca
    15841 gacatttgtt aatattgaac accgcagtga ggatttgctc gacctgcttc gcaatatcca
    15901 ccaccgtgtc gttcagttca gcgcggactt tttcatgcag cgcagcaaag ccttcttccg
    15961 tccagaccgg gccaccattg gcgtcgatca gttgatccac accgcaggag atacagtcgt
    16021 cgatcagctc cagcactttg ccatacgggt taaagtacag acccagcttg gctttgttcg
    16081 gtaacttttc atgtaaatac ttgattggcg agggaatatt cagtagcagt agacggcgaa
    16141 gaccgttcca cattgcctgc ttttgttcca gcggattatc aaacagtttg atcgccacgc
    16201 tgtcgcgttc atccaccagc gccggccacg ccttcacttt gtagttgcca cgcttctgtt
    16261 cgtagctttc cggcagctga ccaaaactcc agatatgtaa gccgctctgc tcgataccgt
    16321 catccgccac cgcagacagc gtttcctgca ctttgccttt cagcgcatct ttcagatctt
    16381 gtagcgagcg cccttctttt agcttcttgt ttttgtcatc caccacgcgg aaggtgattt
    16441 tcaggtgatc gggcacctga tcccagtgcc agtcttcgcg gtcaacggta acgccggtca
    16501 tccgccgtaa ctcgcgctca aggctgtcga gcaacggtaa ctccagcggt ttgacgcggc
    16561 ctaaaaacgc ttcggcatag tttggcgcgg gtacaaaatt acggcgtacc ggtttcggca
    16621 acgatttaat cagagcaatc accagttcgc ggcgcagacc ggggatctgc cattcaaacc
    16681 cgctctcctc aacctggtta agtaacggca gcggaatatg tacggtcaca ccgtcagcat
    16741 ccgcgccggg ctcaaactga tagctcaaac gcagcttgag attgccctga tgccagaagt
    16801 tcgggtaatc cagcttgctg attttttctg cgccctcttt gatcaacatg cttttttcaa
    16861 agttgagcaa atcaggggtt tcgcggctga cttttttcca ccagctgtcg aagtgacgag
    16921 cggagattac atcgtggctg atgcgctggt cgtagaactc aaacaacgtt tcgtcatcaa
    16981 ccagaatatc gcggcgacgt gatttgtgtt ccagctcttc cacttcggcc cgcagtttca
    17041 ggttttcacg gaagaatgcg tgacgcgtct gccagtcacc ttccaccagc gcatggcgaa
    17101 taaagagttc acgacataac gccggatcga tctggctgta gttgaccttg cgcgcggcaa
    17161 caatcggcaa accataaaca gtgacttttt ccgttgccat caccgcgccc tgcgcccgtt
    17221 cccagtgcgg ttcgctgtag gtacgtttaa tcaaatgctg agcgacaggc tccacccatt
    17281 ccgggtcgat acgcgcagca atgcgccccc acaggcggct ggtttctacc agttccgcca
    17341 ccattaccca tttcggcggt tttttgaata aaccagaacc ggggaagatg gagaaacgcg
    17401 cgttacgtgc gccggtatat tcttgtttat cggcatcttt catgccgata tgggaaagta
    17461 aacccgtcag caacgcaatg tgaatttcgc gatactccgc cggttcgctg ttaaccggaa
    17521 tgccaagttc tttcaccacc tggcgcaact gggtgtagat atcctgccat tcgcgcacgc
    17581 gcagatagtt gagataatcg gtacgacaca ggcgacggaa ggcgttggaa gaaagcgcct
    17641 tttgctgctc gccaagataa ttccacagat tcacaaacgc gaggaagtca gactctttgt
    17701 cgtggaagcg acgatgtttt tcgtccgatg cctgctgttt atccatcgga cgctcgcgcg
    17761 gatcctgaat ggaaagcgcg gacgtgataa tcatcgcctc acgcacgcag ccatgttttt
    17821 gcgcttccag caccatacgc gccagacgtg gatcgacagg caactgcgag agctggcgac
    17881 cgagcggcgt cagtttatag gcgctggcct gttcatccgt ggtgatcgcg cccagttctt
    17941 cgagcagacg cacgccatcc tggatattgc gtttatccgg tgcttcgaca aacgggaacg
    18001 cagcgatatc gcccagcccc agcgcggtca tctgcaaaat aaccgaggcc aggttggtac
    18061 gcagaatctc cggatcggta aactccgggc gcgaaaggaa atcgtcttcg gaatagagac
    18121 gaatacagat cccttcggac acacgcccac agcggccttt acgctgattg gcagacgcct
    18181 gcgaaatggg ttcaatcggc aaacgctgca ctttggtgcg atagctgtag cggctgatac
    18241 gtgctgtacc ggggtcgata acgtatttaa tccccggtac ggtcagcgag gtttccgcga
    18301 cgttggtcgc cagcacaatg cgccgtccgc tgtgcgactg gaacacgcgg ttctgttcgc
    18361 tgttcgaaag ccgcgcataa agcggcaaga tttcggtatg acgcagattt agcttgttca
    18421 gcgcatcggc ggtatcgcga atttcccgct caccactcat aaagatcaga atgtcgccag
    18481 ggctttcctg actcagttcg tctacggcgt caaaaatcgc ctgcaactga tcgcgctcgg
    18541 tgtcgtcggc ttcttcaaca atcggtcgat agcgcacttc caccggatag gtccgaccgg
    18601 agacttcgat aatcggcgca ttattaaagt ggcgcgaaaa gcgttccgga tcgatagtcg
    18661 cggaagtgat aatgattttt aggtcaggac gccgcggcag caactctttc aaatagccga
    18721 gcagaaaatc gatattcagg ctgcgttcgt gtgcttcgtc aataatgatg gtgtcgtact
    18781 gcatcagcag gcggtcttgc tggatctccg ccagcaggat accgtcggtc atcagcttga
    18841 ccatcgtgtt atcactaacg tgatcgctga aacgcacttt gtaaccgatg caaccgcccg
    18901 gctccgtttt cagctcttcc gcaatacggt tcgccaccgt tcttgccgcc aggcgacgcg
    18961 gctgggtatg gccgatcagc cctttaatcc cgcgccccag ctccatacag attttcggta
    19021 actgagtcgt tttaccagaa cccgtttccc cggcgacgat caccacctgg tgatcacgaa
    19081 tcgcttcgag aatgtcctgt tttttctgac taacaggtaa attgtcagga taagtaattt
    19141 ccggtcgtgc cgcttcacgc agcaggactt tccctgccgc ctggtcaatc tctttcgcca
    19201 tctcctggaa aatggcctgt tgtgcatcag gatttttaac cttcttaaca ccgtgcagac
    19261 gccgagaaaa acgcagtctg tcgcgcagca tcagcgaatc cagccgctgc tgcaaggccg
    19321 taaaggtcaa tttttgttgt tctgtcataa cgttagtggg cagtagtctg cctgattaat
    19381 tttcttttaa atgatagata tagagtacca catcgcggct ttctatgcgt tgttcaataa
    19441 attcgaacat aggcttcgat ttattgcgct atctctgtgg caggattgtg aataaagtgt
    19501 cagcaagcaa cggggcatcg cccattcaaa catctataag gaaacaccat gagcaaggta
    19561 ttagttctta aatccagcat cctggcaggg tactctcagt ctaatcagtt gtccgattat
    19621 tttgttgaac aatggcgcga aaagcactcc gctgatgaaa tcaccgttcg cgacctggct
    19681 gcaaatccga ttccggtact ggatggcgaa ctggttggtg cactgcgtcc gagcgatgcg
    19741 ccgctgactc cgcgtcagca ggaagctctg gcgctttccg atgagctgat tgccgagctg
    19801 aaagcccacg acgttatcgt tattgcggca ccgatgtata acttcaacat ctcaactcag
    19861 ttgaaaaact attttgacct ggttgcacgc gcaggcgtta ctttccgcta taccgagaac
    19921 ggtccggaag gtctggtaac gggtaaaaaa gccatcgtta ttaccagccg cggtgggatc
    19981 cacaaagatg gaccaacgga cctggtgacg ccgtatctgt ccacgttcct cggctttatc
    20041 ggcattaccg atgtgaaatt tgtcttcgcc gaagggatcg catacggtcc ggaaatggca
    20101 gcgaaagcgc agtctgacgc gaaagcggcc atcgacagca ttgttgctgc ataaccggac
    20161 acgatcttga tgtggactgt agttcagtcc acatctcaat ccacttacct gttttcccat
    20221 aatttcagca tcgctttgtg atcttcctta agcacaatat gcgaacgtct ggctcgaata
    20281 taactaatcg cttcatcaac ggttttacag tgtccgtaac ataacaacca tgccgccact
    20341 accagcgcac tgcgcgataa tcccaacgcg caatggacca gaacgctgcc ttgctcttcg
    20401 cgtaatgttt ccagcatcgc cacggcctgt cggagctccc cctcttccgg aaccaccaga
    20461 tccagcatcg gtacacagaa atagagtcga tcttttgtcg ctcgtccccg agggaattca
    20521 aaggtgacgt ccagaaccgc attctgtgcc ggaatatgtc gtggaaacgc ccctaaataa
    20581 acaccagcag taattttgct caccggctcc aggcgacgac aaaaccaacg catagacagc
    20641 cacatcccga tgcgccaggg caatgtcagc cagtaaacgg cgggcgggag tttcccctga
    20701 ctatctttcc ctgttgttat cgcgccaagc ccaccgtacc cacggccaat aatgagtagc
    20761 gataatactg gccaacataa ccagactgac caccataact gaatcatcac cattagctcc
    20821 atcaacacaa tgcacgagcc cgcgcctacg acatatggca gtgctatttt gattcgacgt
    20881 tgatcaggtt tctgataatt ccaacgacga tcgacgggca ccatccagtc aatcaacata
    20941 cctaccgcca gccctgtgat gacatcaata aaatgatgct gccaggtcgt cagagtagaa
    21001 atagcgatga gtaaaaacca tccgccacag actttacgcc acctctcagc cagatgctga
    21061 cgaaagtgac gccaaagtag ccagcagaga ataatatgca gcgaaggaga ctggttataa
    21121 ggcagatcaa acagttcaag ttgcgaaaat agccatcccg tcaccccact cacttcagga
    21181 cggataaaac taaacttcag cggatagagc aaaaaaccgc agcaggccat taccgttgcc
    21241 agaataagcc ggtggacaag tcggcgctgt tcgaatgtcg tgctacaaac gaacagcgaa
    21301 aatccatata aaagatccag actccagtaa ggaacaatag tccagggaag aaaagggatc
    21361 gccgtttccc aaccgaatac ctgactgggg atatcatggc tgttaaggtc ctgaaccgcg
    21421 gtgaactgat taagagatcc ataggtgaag aagaaaaacg gggccagcaa caataaccag
    21481 ccagcgcctt gtagcaatac gttccgacgt tcagttatca cgacgcaccg ccatcgaaac
    21541 agtaaaaata ccccactcat caatccgttg tgtgcattta tcaaatccgg catcacgcac
    21601 gagtgaatcc atctcccctt gcgaacgcac gcgcattacc cacggtttac catctttatg
    21661 actggttaac accccggcaa tcatctccag ttgagggtgc cacggctgcc cggtgtagat
    21721 gagaatgccg cccggttcga tggcattggc aagacctgcg agtgagtttt ttacctgctc
    21781 attttcggga aaaagctcat acaggccaga gacaatcgcc agcgtaggcc gcggagttaa
    21841 cgcgctgagt tcctccgggt taaacgcatc gccctgttca aaacgcaccc gcccagacat
    21901 tccccgttgg gcaatcatcg cttgcccctg tgcaacattt aactcactgt aatcacgtaa
    21961 caaaatatcg cttacggcag gctcgtttgc cagcgcatcc agtacatagc gcccatgccc
    22021 tgcggcaatg tcaaccacgc ggacggctaa acctttggcg tggagatcgg caacggcttg
    22081 tttaatcagt atttgtaaat gggttttacg ctggcgaata ccgcgccagc caacactgtt
    22141 caggtagatt ttgtcaatta agcgcccgaa tgcgttactg ccttgcggtt gattttgata
    22201 gacataatcc agggaactgc ctgaatcaaa gccggtgctc attccgagat gcaggcccgc
    22261 agagtgcgcc ccgaacaatt tcatcgcctt tcgcataaag cgatacgcca aatcaaccgg
    22321 cgataatggc acgggtccac ctgaaaggag ccgccagcga tccgctgatg gtccagtgcg
    22381 gtcttcatgc tgataatcaa atttttgtga cttgttagca tataaacgac taataaagct
    22441 ttgcattttt tcaaatgcct gcgccctgtt ctcttcaccc aacgtgtcgt gataaaagcc
    22501 tggcagcaga tgcagctctt tcagagggct acgtaatctc tgataaaaat caatctgcgg
    22561 ttggcgatgc accacatagt catcgcctga tatcagaagt tgcgtgggga gcgtaatcgc
    22621 cgccgcatct ctaataatac gttcagacgt tttgtagaga tcgagcaaga tattaacggc
    22681 aatcgcccgt gtgatcagcg gatcattatt gaaactcgcc acccgttgcc gatcgtgggt
    22741 caaatagcgt cctttcacat aggaattaat aaaaaacaga ccacgcagac gatgccataa
    22801 cgccagcgca ggacgtgcca gcggtacata caatttaacc ttaaaggccg gagaagccag
    22861 caccagcccg cgaattgcag gcgcataatc atgaacccat gtggcaacca gcactgcgcc
    22921 gacgctttgc gcgatcacta ccacctcatc cagtccgacc tggctatcgc tggcagcaaa
    22981 acgaacaaat tcatcgacat cctgcactga acgcgcaaga gatgggctat aaccacgcgg
    23041 ccccgaagtt tgtccatgcc ctcgggcatc ccaggcataa aaaacagtat ctggcatcgc
    23101 cagttcatca acgagatgtt gtagacgacc agaatgttca tgaccgcgat gaaataagac
    23161 gatgaccttt ttagccccgg gctgtaaagc gggccagtgc cgataaaaca acgctgtatt
    23221 atcactgctg gtaaaaaaat gttccccatg gatgcgtgaa ttttccattt tctctatttt
    23281 ccttcagtaa cagcagtagc gaataaaata aaaaaatacc ggagcggtga aaattaatga
    23341 gtcaatcctg tcaaggagtc cgccatgtcc tggtaatagt ttcccactat ctttaacacc
    23401 aatatctcgt ttgatggctg acatcacgac atcgccgcaa aaaccactaa taccaattaa
    23461 caaacccgct aataatgcct gtaatgtatt tagcggtgtc agcaacggtc caataatcag
    23521 tgacgcaatc atggtggtga ttacgccccc caccagacct tccagcgttt ttcccgggct
    23581 gactttgggg accacttttc ttctgccgca ggatttcccc cataaatact gtgcaatatc
    23641 gtttgactcg gttaatgcca aaagaaataa caccagtaac gccccgccct ggatatttgt
    23701 ggttggcaac attaataacc aggcggcatg actcaaggcg aaaacggtca ttatccagcc
    23761 ccaaaaaatg gcgctcacgg tatgcagaaa accggagggg tcccccataa aaacttgccc
    23821 ggtggctaat attagaaacc cagccaaagg tataaataat agatacagct caaagcaatt
    23881 aaaaccgata aacaaatagt taagaggaat aacccaatat aaccaccgcg gaaaatgtac
    23941 agatataagc gtacaatatt ctttcaatgc cagaaaactt atcagcgcaa aaaacgtcaa
    24001 cgtcatccag cgtggacctg aaatcaccag tgaaaaacaa atgacgatgc cccaccaggt
    24061 acgaatacgt aatgtaactt catcctcttt tctctccggt aaccgccata gcagaaaatg
    24121 gtttatcagc gttgctaaaa ttaacaacgc gaaaagtgtt gccagagatt tttccagcat
    24181 tatctttcag cgctcataag aagcacactc cgacaacgat taatcgcagt ccagagaagc
    24241 agaattgaag caatgctcca taaaagatta ttccactgca tccactgtgg ataaatggca
    24301 acggccagac cccacagacc aaatattaac gcgcgatcgc ttttgccaaa tggaccggca
    24361 taactgcgaa caccgttaat cgtctgcgcg agtaaaccgc aaaactcggt caatatggtg
    24421 caaaataaca tgagtatcac gagtgatgcg ttactttccg gtaaaaataa aaatggtaaa
    24481 tagagcgcaa tatcggaaat aacatcacca gtctcattca aaattgcccc aaaccgtgtt
    24541 tgctgattgc actcacgcgc caacatgcca tccagcgcat tgagcgccat acggataaaa
    24601 agcacgatgg gcaatagcat aaagaggatg ggttgtgcca ccaacatcaa cagcaatccg
    24661 gtaagaagag aaagcgccag tgcagcaaga gtgatgtgat tcgctgtaac gtggtgctta
    24721 taaagccaaa acatcgtcgg ccttaacagc gactgaaaga gcggttttat ctggtagagc
    24781 gtcattatca atccttgata attcggtttg cgctatggtg catcaattcc cctgacggag
    24841 atatcgcaac acgccgcttc attaaaaatt cagaatgtat caaggtattg gggactcact
    24901 gccaggaatg attatcccca attaatcaaa tagttaagaa acattacgtt gtggatcaat
    24961 acaactcatc aagttttctc atcgcttgtt cccgtattgc gcgcgtctta ccgttaagcg
    25021 ccagctggcg gactaaatct agttcagggt taacaagctc taacgccagc aaaggatcac
    25081 gtttcagcct cgcctttaat acatcaactg gaaaacgggg attattcatc gccacaatcc
    25141 accactcggg atcaatttct gccgccagta ctgcaggcag tgtgtggcgg ttgttaagtg
    25201 cgccgaactt gaaaaatgtg agattgcttt tcgccagtgt actccaccat atacgatccg
    25261 gttgttttgc cagtacatcc agttgtgcta acgcatcggg gtcgagtgca taatagacgc
    25321 gtaatgcttc atcaacctgc gcacgggagc tgttttcctg cctcagaaaa aacttcgccc
    25381 aaatatcatt gcgtggcgta ttttgctgta attccttgag gacaacagcg ggtaaattat
    25441 cccaactaac taatgcactc tctaaaaagt cccagtcttc caaacgtatc agggcggtgg
    25501 catttaatag catctgatca tcaacttcac cgtggctgat aagctcagac aaaatcatat
    25561 cagcgctggt ttcatacgca gctgaatctg ctttcggatc atttttccga tgcgataaag
    25621 cacgttgcca aattttttgt ttcatcgacg tgctcagata ctgatttttc gccagattac
    25681 tccacccctc aggatcgttg aaacgtgtca ataaccgttg tagagcagcg tcagagtgaa
    25741 ttacctgcat atcccgacag caaaagtagg caggggattt tttctccatc cttttaacaa
    25801 aattaaactg taagttatct ggcaatgcta aaaataacac acgtattaga tcatcgtcat
    25861 tctcgaattt ttggtataaa taggctgcaa ctttgtcact ctcttgtggc gtcatccgca
    25921 ataattgacc atggtgtttc atctctgcca gcttgaacgc taagcttgtg acaacattgt
    25981 ttgatgaatc gttcgccaac tgcattgcct gattgtaggt gagttgtcct ccagcaccga
    26041 cctgacgaat agaggaatca tcactgcgga tatagccatc aataatggat tcaggcaata
    26101 accacgcatc tttataaagc tcctgaatga tcatatccca atctcttttc gccagagtca
    26161 ttacgatatc cagagggaga ttttcacgta gcgcaagatt caacggaccg acaccatcag
    26221 gtagacgact cattcgcgtc attatttcga cagagagcgg ttcacggtcg agcaacccca
    26281 gaacaacagg ctggtaaccc aattgctgat cggtcaactc cagaatctca ttgtcaggca
    26341 tatatctcgc catactttca atcgtttgtt catcattgct attaataagt tgtttgcgta
    26401 ggttagctga aattccttta agccttggga gagttcgcat tatggcaaga tcaaatgtcg
    26461 caatatctcg tccttcaaat gcagcaacgt tgccttcatc cagcatttgc aattcctgca
    26521 ctaactcagg agaaggctta gggcgaaaca gcgcttcttt tttcatctga ttacagacat
    26581 tccctgccat gcgaatattg cttcgcttaa aaatttcttt cagagcatct tcatcattta
    26641 ttagacccca ataatatgca tcaggattta ttatcatcag cgcttttttg acattttcag
    26701 tgtcattttt gtcactcgca cggaccatga attcactatt tgtcgaagac gcaacaacag
    26761 gtgcaattat gtcattgata aatatcccac gcgcattaat actcccctta atcgaagacg
    26821 gattatcgta atatgagtcg ataaatacca gtccacttgc atttatcgaa ccggtaatta
    26881 acagtggtga atccgtaact atattcgttg ccgtcacgtt accgagaata acccatggat
    26941 tagaaagaga gaaagtggaa atattacctt tgactgtcaa attaccaaga acaatcaatt
    27001 tttgattact ctctatatta ccttctacca ctaaatcgcc acgatgcact ttccagtccg
    27061 atgcagataa accgaagggg acaagattca cgctactgtt gatagcttgt tcaacttgtt
    27121 gtttatcttc agcggtagcc gcagaaaaaa atggttcaat atcaaatgta tttgcaacac
    27181 atcgaagttc cgcctgtact ggaagactca gcataaacag gggaagtaaa cctatccagc
    27241 cgcaaatcct ggccttaaac atatgcactc catgccatta aaaaagaaac aaaagggaaa
    27301 tgcatctttc ccttttgtat attcgttatt ctcgcgaaat accatccaac gtagacaaca
    27361 cttcctcaga aagatgcaat ttttcagcag ccatattctc ccgtaaatgc gcaacagaag
    27421 acgtccctgg gatcagcaaa atattcggtg aacgttgtaa cagccacgcc agcgccacct
    27481 gcatgggtgt tgcacccagg ctcgcagcaa catccgacag cgtagaggat tgcagcggtg
    27541 taaagccccc gagcgggaag aacggcacgt aggcaatgcc atcgtgggcc aaagcatcaa
    27601 tcattgcatc atcagcacgg tgcgcgatgt tgtattcgtt ttgcacacag acaatttcgg
    27661 caatcttgcg cgcctctgca acctgcgtcg gtgtgacgtt gctcaggcca atatgtttta
    27721 ccaggccttg ttgttgcatc tctgccagca cggtcaggct ggcctcaatc gatccttccg
    27781 ctgggccatg accatccccc atcataacgc gcaggttaac cacatccagt acgtccaggc
    27841 cgagattacg tagattatcg tgcaccgctt tttgcaactc tgccggagaa aaggcgggca
    27901 accaggaagc gtcctctcca cgccgcgcac caattttagt gacaattgtc aggtcgtcag
    27961 agtaaggata aagcgcttcg cggataatct gattggtgac gtgcggacca taaaagtcgc
    28021 tggtatcaat gtgattgacg cccaatgcca gcgcctcgcg cagcacggtt atagcgacgt
    28081 ggcgatctct tggggggcca aaaaccccag gacctgccag ttgcatcgcg ccataaccaa
    28141 gacggttaac ggattttgta ccgagagtaa atgtattgct gctcatcgca ccctgccctg
    28201 taataaaacg gattaagaaa aatcagtata gaaacgaaaa gagataaata atgcgagggc
    28261 gtaaacaaga ttactggatg agttgctcta ttgtcctgaa aaacacaaaa caaaacgcgt
    28321 caagtaccgc atccggcaat aaaaaaccgc aacctgtatc agcgttgcgg tttaggtatc
    28381 acatgctaaa aattagaatg ttcagtatct ggacgttact gtttcggtcg cagattctca
    28441 tcaaatacca ggcgctgcct gccaggttca acttcccgca atggttcgac ttgatgcaac
    28501 gtctgcttac agcgtgtcac cagcacctgg tactcatgcg taccctgctt tttccatgcc
    28561 aactcctgct cactgagttc acgaatcgct ttcgccgggc tgccgacaat caggtaatta
    28621 gctggcattt ctgctttggc tttcacaaat gcggatgcgc caacaatgct gttctcgcca
    28681 atcaccgcgc cgtccatcac taccgcgttc attcccacta atgcattgcg gcggataatg
    28741 caaccatgaa ggatagcgct atgaccaata tgcccatctt cttccacgac agtatcctgt
    28801 tcgggaaaac cgtgcataac gcaattatcc tgaatgttcg cgccatcttt caccacgata
    28861 cgaccaaaat cgccacgcag gctggcattt ggcccaacgt aaacaccctt gccgagaata
    28921 acatcgccgc tcaataccgc tgtcggatgg acaaaactct cttctggcac aaccggagtc
    28981 agaccgtcta tctgataaat tggcataacg cctcctgttc aatattcaaa ccgccaaaac
    29041 gttgaaaata caggctaccc ggcgaaggca gttcaccgac cgaggtttca cctttttcac
    29101 taacgaacgc taaagcagca ggcgctacgc gctgataaat gttgatacac agctgacgcg
    29161 ccgtatgccc tgcccagtga gccggaagca actcctccgg caacaaaggg tctttaagga
    29221 cgacacggcg ataaaaatgg atcagtaaaa gctgaatatg aaatgcacgc tccggggtta
    29281 actcgtctgc tgcctctttt aacagctgca ccaacgggcg gaatgactga ataaaggttt
    29341 cgtacatggc attttgttca gttaaatgcc agcactcttc tactctggca cgcagtgctg
    29401 cacgagaaag cgccagtggt atttgcgctt caaaacaaat cacgttatcc gccacacccg
    29461 cttcatgcaa aagtgtctgt acatcggcca gtttttgcga cggcgatgcc atcaggctgg
    29521 gtgccagtgc gccaaaacct tgccagatca actgcttttt gacatcagcc agcgttgatt
    29581 tatctaaacc ttccgaaagc aacaggagcc atttaccatc ccatgcaggt tgctctgcgc
    29641 gataaatttt actttctgcc cgtcgcgtca ggcgcaagcc tttatcactg aggctataga
    29701 aactgcgtcg cccgatgcgg gaaacatcca gccagccttc tttattaaga cgaaacaaag
    29761 cggtgcgcac gaatcgctca ccaaatccca gcccttccag taaagcagcc agactaccca
    29821 gccagatttc accaccacga tgggaaagcg aatcaccata cagagaggag atcaaagatg
    29881 tgccactgac cggaacagcg tttacagcat gttggataaa agtaacaagt ttactcattc
    29941 gattcagtct gttgttattg ttgtgattta tgaatcatag cacaggtcgt atcgacttct
    30001 ggccctggcg ctttacctca ccagggccag acgacacgtc aggcaccaac aatattgcgc
    30061 agatcaaaca cccgacacgc cttgccttct gaacgcggga tactgccaca gttaacgatc
    30121 atcacatcgg tagagatccc caccatcgac ttaatccgat ggcgcagctg gtggcacacc
    30181 tggcaacgct gctcatgcgt caatgtcagg ctgctttctt tcaactccac tttcacagaa
    30241 agtgaatcaa gatgcccccg gcggttcacc tccagttggt aatggggcga taaatgttcg
    30301 aatttgacaa tctcttcttc cagttgtgac gggaagacat ttacaccgcg aatgatcaac
    30361 atgtcatcgc tgcgtccgct gatgcgatcc atgcggcgca tagtccgcgc cgttcctggt
    30421 aacagtcggg ttaaatcacg cgtgcggtaa cgaatgaccg gcaatgcttc tttggtcagc
    30481 gtggtgaata acagttcgcc atgttcacca tcggcaagcg gtgtgccgtc atgaggatta
    30541 acaatttcag gatagaaatg atcttcccaa atggttgggc cgtcggtagt ttccagacac
    30601 tccatcgcca cccccggccc catcacttct gacaggccat aaatatccag tgcggtgatc
    30661 cccagacgcc gttcaatctc tttacgcatg gcctgtgtcc acggctcagc accaaacact
    30721 ccaacccgca gcgagcaacc gctggcatca ccgcccaact gccgctccag ctcttcaatc
    30781 aggttaaggc aataagatgg cgtaaccatg atcatatctg gttgaaaatc gcggatcagt
    30841 tgcgcttgtt tttccgtctg cccaccagac atcgggatca ccgtagcgcc cagacgttcg
    30901 gcaccatagt gcgcgcccag cccaccagta aacaggccgt aaccataggc aacatgaatt
    30961 ttgtctttgg gcgtgccacc tgccgcacgc aaggaacgcg ctacaatatt ggcccagtta
    31021 tcaatatcgt tttgcgtata gccgacaact gtcggtttac ctgtggttcc cgaagaagca
    31081 tgaatgcgca ccacttgttc catcggcacg gcaaaggtgt cgaagggata gttgtcgcgc
    31141 agatcctgtt tggtggtaca gggaaattta cgcagatctg aaagttccct gaaatcatca
    31201 ggatgtacgc ctgctgcgtc aaatttgcgc cgatacatcg ggacattttc atacgcgtgt
    31261 ttgagcgtcc atttcagacg ttgtgtttgc aacgcctgta actcatcaac agacgcggtt
    31321 tcaatcgggt caagctttgt attggttatc attgtagggt actcgcaggt tgatatgctc
    31381 aaacacgctc cagaatcatg gcgatgccct gaccgacacc gatgcacatg gtgcacaatg
    31441 cgtaacgacc gttacgccga tgcagctcat ggctggcagc cagtgccagg cgggcaccac
    31501 tcattcccaa cggatggcct aaggcgatag cgcctccgtt ggggttaaca tgtggggcat
    31561 catcaggcag ccccaattcg cgtagtacac ccaacgcctg ggccgcgaac gcttcgttca
    31621 gttcaatcac gtccatatcg tgaatactca gccccgcgcg ttccagcacc cggcgagttg
    31681 caggcaccgg accaagcccc atcaggcgcg gttccacccc ggcggttgcc atggctacga
    31741 ttcgcgcccg cggtgtcagt ccttgcgctg ctgccatctg ttcactggca ataatcaacg
    31801 cagcggctcc gtcattcacc ccggaggcat tgcctgcggt aatcacccca ttggcacgaa
    31861 atggtgcttt taacccacgt aactgttcca gcgtcgtttc cgggcgcaga tgctcatcat
    31921 gttgtatttc tgttacaaca cctttcttgt ttttcaacac aaccggaaca atctcctcag
    31981 ccagaatgcc tgaggattgc gcttttgccg tacgttgctg actgcgtagc gcaaaactat
    32041 cttgatcttc tcgcgatatt tttaacagtt cagctacatt ctctgccgtt tccggcatgc
    32101 tgtcagttcc aaattgttga gccatgagcg ggttcacaaa tcgccagcca atagtggtat
    32161 caaacatctc agcctgacga gaaaatgcac tggttgcctt gcccataaca aacggtgccc
    32221 gagacattga ctccacgcca ccagcgatca gcaaatcgcc atcgcccgct ttaatcgccc
    32281 gtgcggcgaa ccccagtgcg tccagcccgg aaccacacaa gcggttaatg gttgtgccgg
    32341 aaacactctg cggcagcccc gccagtaacg tcgccatccg ggctacgtta cggttgtctt
    32401 ctcccgcctg attagcacag ccgaggatca catcatcgat acactccgca tcgagacgcg
    32461 ggtttcgcac cagcagctcc cgcaaaggga tagcagccag atcgtcagcc cgaacacctg
    32521 ataatgcccc accatagcgg ccaattggcg tacgaattcc gtcacagata aaggcttcac
    32581 gcatcaggct tctcctgtaa tggtgccgcc gatgcggtga gatttaccgc gaaacagcgc
    32641 aaccgttttt tgttgttggt taacaatttc gatgtcgtaa acaccggttt gcttgccctg
    32701 gtgacgtacc tgcgcagtag cagttaaggt gtctccggca aagcctggac gcaaaaaatc
    32761 aatcgtgcag gcagaagcga cggctgccag cccctggcta ttgcaggcgt aggcaaaggc
    32821 agtatcagcc agtgaaaata gctgcccgcc gtggcaactt tgatgaccgt taagcatttg
    32881 tgcagtgacg gtcatggcca ctacagcaaa gccttcatcc attgagataa tgtcgatgcc
    32941 aagcgctttg gcgcaggcat cgttctcata cattgcatgg gcattttgcc aggccttatg
    33001 actcataacc gctctccaga agcgctcgtt ggcgcagcaa tgaacatggg cgatagcgtt
    33061 cttcgccata gtgatgttgt agattttcca ggagccttaa tattcgctgc cagccaagtt
    33121 gcgctcccca ggcaagcggg ccatatggat aattcacccc aagacgcatg gcggtatcga
    33181 tatcctgttc agaggccacg cctttttgca gcgcatcaag ggcttcattg atgatcattg
    33241 ctaccgttcg ccaaatcagc attcctgggt aatctgcaat ttgcagcact gttttgccct
    33301 gctgttgcag gtaataaatg gccttgcggg tcgctgagtc cgggttcacc gctgccgcag
    33361 caatggtcac caccttgccc gccattttgt cgaccactac caccgggcgt gccagtcgta
    33421 ttgccagcgc ctgtgccgtc tcgccttgtg tctcaatcaa taaaacatcg tcaatttccg
    33481 tgacaccgtc acttttcttt tctactttca ttgggctaaa actgtcgctt accgcttcca
    33541 ggccaacaac tgcctcacgt tccgcgcgcc agtcgtacac gcccagccca cttttcttgc
    33601 ccaaccgtcc accaatcacc agttcctgtt gcaccagcga aggtaaaaaa cgacgctcct
    33661 gccagaaagc gttaaacacc gaacaggtga cagcaaaatt gacgtcctga ccaatcagat
    33721 cggttaattc cagcggcccc atcgggaaac cagcgccatc gcgaagtgca gcgtcaatca
    33781 cttctggtgc agcaacctgc tcttccagtg cccgccaggc ctcggaataa taaggacgcg
    33841 caacacggtt aacgataaat ccgggggtcg aatgacagcg cactggctgc ttaccccaac
    33901 tcaatgtcag ttcacacaac tgctcgacaa cttccgctgc cgttgccagc ccactgacca
    33961 cctccaccaa cttcatcacc ggtgccgggt taaaaaaatg cagccccgca acacgttcag
    34021 gattttttac ctccgcagca atcgcggtta tagagattga cgaagtgtta gtggtcaata
    34081 gcgtttgtgg cgggcaaact tccgccagtt gtgcaaagag cgctttttta acttccagac
    34141 gttcagacgc cgcttcaata accagattcg ctgctgccag cgcgtgaata tcggtcaccg
    34201 ggatcaggcg tttcaatgtg cgttcacagg tttcagcggt cagttttccc cgcgtcacgc
    34261 gtgaatttag ccgcgcgtgt atcccgtcga ttgcgcgggt cagcgcttca gcagaaatgt
    34321 catacagtaa aacctgatgt ccatgactgg cggcaacttc agcaatgcct gcccccatgg
    34381 tgccgctccc aatcactgcc acagtttgca catttatcat catgctattt ccccgtgaac
    34441 tgcggtgagc gtttagccag gaacgcactg acaccttcac gataatctgc gctccgtccg
    34501 gcaagtcgct gatagtcacg ttccagatcc agttgcgtat cgagcgtatt ggtttcagcg
    34561 ctatttatcg cttgcttgat aagtccaaga ccaaatgtcg gttgtgtcgc cagatgccgt
    34621 gccagctgtt gcgcggtatc tgccagcgtt tcatcatcaa caacctgcca gatcatcccc
    34681 cattcgtgcg cctgttcagc actcagttga ttccccagca gtgccagccc catggcgcgc
    34741 gctcgcccag caacgcgtgg cagtaaccag gttccaccgc aatcgggtac taagcctaac
    34801 ttactaaacg ccatgacgaa ttttgctgaa cgggcagcaa taacgatgtc gcatcccagt
    34861 gccagtgttg cgccagcccc tgccgccacg ccattgactg cacagatcac cggttttggc
    34921 agttttgcca ggcgacgtac cagcgggtta tagaaacgct ccactgacat ccctaaatcc
    34981 ggtgcggggc ctgtgggatc aacattacga tcgttaagat cctgaccagc acaaaatcca
    35041 cgtccggcac ctgtaattaa caagcaacgg atagtgtcgt cgcgctcgac ctgtttcagg
    35101 cactctgcca gttgtgtgtg catctcatca ttaaaactgt tcaggcgttc cgggcggttg
    35161 agcgttagtg tcatcacgcc cttttctaca tgactgagga tgaattccat cattagcgtc
    35221 ctttaaagtc aggcgtgcgt ttttgtaaga aagcagagat gccttcatga cgatcttctg
    35281 ttgccgccag caaggtgaat aactgtcgct cctgggcaag tccggcttgc aaagccactt
    35341 cctgcgactg gcgcagcgct tgctttgccg cttgtaaggc cagcggcgag tgacgtgcca
    35401 ttttcgatgc cagctgtaag gcgtattcga gggttaaatc gctggggaag acgtcgctaa
    35461 ccagcccggc ctgctgtgct tgctgggcgg tgatactttc tccgctcagc accattttgc
    35521 tggctaacga tttaccgaca ctacggatta aacgttgcgt tccgcctgcg ccaggcatga
    35581 tgccgagagt gatttccggc aacccaaaac gcgcgttctc tccggcaacc accacatcgc
    35641 acaacaatgc cagttcgcaa cccgccccaa gcgcgtaacc attgacggct gcgataagtg
    35701 gtttattaaa ggcctgcaat cgcgcccata gctgcgggcg tgtatcgttt aaggtggccg
    35761 cgagatcttt ttctgccatt tcgttgagat cggccccagc ggcaaaaaag cgtgcattac
    35821 cggtaatcac acagaccgaa atgctgctat cggtagccgc agcttccagt tcatttacca
    35881 gttgcgtcag aagggcatta tttagcgcat tacgtgcggc gggacggtta agggtcagca
    35941 acaatacttg ttgctgacgg ctgacgatca gttcgctcat gccatcccct tcgcgtcaaa
    36001 gtcaaccacc acatcgctgg tcagcggcag tgcctggcaa ctcaacacat aacctgcggc
    36061 cagttcatcc ggttccagac tgtaattggt ttccatcgcc actttgccac gcagcacttt
    36121 gcatttgcag gtcgcacaga cgccgccttt gcaggcatag ggcagatcag ccccctggcg
    36181 caatgccgca tcgagaatgc tttcatcgtc ggcattaagc acgatttccc gatcccgccc
    36241 atcctgacgt acagtcactt tttgtccgtc actttgcacg ttaacgctac gtttgacgcg
    36301 cgtgccaggc gtattaaacc gctccagatg aatggtttta tctggcattc ccagtgcttt
    36361 taaggcggct tccgtctcat ccatcatcgc cgccggacca caaataaatg cctcatcata
    36421 aagacgaaaa ttaatgagcg aggccccaag tgactgtaat ttttcaccgt caatacgccc
    36481 gtgaagcaga tcgctgtcga gggtttcctg actgaaaatg cacaacaact gtaaacgctg
    36541 aggatatttg tctttcaggt ctgccagtgc ctggcgaaac atcatgctct ggctggtacg
    36601 gttaccgtag atcagggtga actgactttc aggctcggtt tgtaaagtgg tggcgataat
    36661 cgccagcatt ggcgtaatac ctgatcctgc tgcaatagcc agatagcggc cctggcgttc
    36721 ggcctgtggc tgatagccga aatgcccctg cggcaccatg acctccagcg tcataccctg
    36781 gcggatgtgt tcgcgggcat agcgggagaa acgtccgcct tcaatggctt tcaccgccac
    36841 actaatttcg ccaggcaggt agctgcggca aatggagtaa caacggcgta attcttcacc
    36901 atcaagactg gcttttaagg tcaaatgttg accggggcga aagcgatacg cctcctgcaa
    36961 aggctggggc accgcaaagg taatggtcac cgcatcacgg gtttccggct cgacttttgc
    37021 cactgttaag gaatgaaacg ttgtcatggc atcctcaaat acatttgaaa taatcgaaag
    37081 gttcgcggca actatcgcag cggtacaatg ctttgcaggc cgtggaacca aattcactga
    37141 taagtgtggt atggacgctg gcgcagcgcg ggcaacgtac ttctggcggc aaatgggcat
    37201 ggcaactgtg tccggcgggc gggctaatgc catactgtcg cagacgctca cgggcatcgg
    37261 gggtcatcca gtcggtggtc catgccgggt cgagttgcag cacaacctga acgggggtaa
    37321 acccgtgggt tgtcattgcc tcacgtatcg cgccaatcaa atgttccgtt gccggacaac
    37381 cggaataagt cggcgtaaag ccgatcaccc atccttctcc catctgtgtc acattacgca
    37441 ccatgcctaa atcggtaatg gtcagcaccg ggatctccgg gtccgggatc tggctgagta
    37501 gctcccatat ctcatgaacc tgtggcggtg caatggtggc cagacgttgc atacccatct
    37561 cctctgttac cattgctgac cgggcaagac acgctggaga tactgcattt ctgccagcat
    37621 gggtccaagg tgttcggtat gcagtccttt tttaccgcca gtgcgatacg cctgctcttg
    37681 cggtacgttc aatgtggctt cgttgattcc ggcaaaaact tcggcttccc acgctgcgcg
    37741 taaagtgcgt ggatcaaccg caataccctc ttcactcagt gcaatatcaa tctcgtcggc
    37801 atcgaacagt tcggcagtaa aacgccacaa cttgtcgatg gcctgctgca tcttttgccc
    37861 tgatacgtca gtaccattgc ccagtcgctc cagccagcca cgactaaaac gcaggtgata
    37921 acgcgcttct ttaattgctt tggcagaaat cgccgccagt tgcggatcac ggctttccat
    37981 cagacgggta aagagcgcca catgccatgc atcgatgaaa tactggcgtg caatggtgtc
    38041 ggcaaaattg ccgtttggtt gttcaaccaa caataagttg ctgaactggc gctcgtctcg
    38101 ggtgaaggcc agggtatctt catcaccttc tcccgctaat tcagcggcat acgataagaa
    38161 gttacgtgcc tgacctaata aatcgaggcc aatgtttgcc agtgcgagat cgatttccag
    38221 ttccggtgcg tgaccgcacc attcccccaa ccgctgggag agcaccagac agttatcgcc
    38281 caggcgcaag gtgtaagccg ttaactgatt catttccgac ctcacatgtg ctcaatgcca
    38341 tcagggatgg tgtaaaacgt tggatggcga tagaccttgc tttcagccgg atcaaaaaat
    38401 tcaccgcgtt cttccggttg cgaggcaaca atttcactcg ccttcaccac ccaaattgaa
    38461 catccttcgc tacgacgggt gtaagcatca cgggcatttt ccagtgccat ccgctcatcg
    38521 gcagcatgta aactgccaac atggcggtgt gataagccct gtttgccacg cacgaaaact
    38581 tcgtataacg gccagtaaac attactcatt ttgaatctcc ttatgcgacc ttacgggcaa
    38641 gttgtttttg tgcatgggcc agcgctgctt cccgtaccca ggtaccttct tcccaggctt
    38701 tacgtttggc gtcgagcctc tcctgattac aaattccgcg accgttaatt acttcgttaa
    38761 actcctgcca gtcgatctca ccaaagcggt agtgaccgct ttcagtgtca aaatgcagat
    38821 ccgggtcagg aacggtcata ccgagcattt caacctgtgg aatggtgtta tccacgaaac
    38881 gctggcggag ttcgtcgttg gtgaaacgtt tgattttcca ggcgagactt ctggcgctgt
    38941 ttggcgagtt atcatcgttt ggcccgaaca tcattaaggc tggccaccag aaacggttaa
    39001 tggcgtcttg caacatctgc ttttgagctt cgctgccctg cgccagtgcc atgcaggctt
    39061 caaacccctg acgctggtga aaactctctt ctttgcagat tttcaccatt gctctggcat
    39121 acgggccata agaagtgcga cataacgcca cctgattgac gatcgctgcg ccatccacca
    39181 gccagccgat aacgccgata tcagcccaac tcaatgtcgg ataattaaag atggaggaat
    39241 atttcatccg tccgtcgagc attttttggt agatgtcttc tctggcgcag cccagtgttt
    39301 cggcggcgct atagagatac agaccatgac cggcttcatc ctgcactttg gccaacagaa
    39361 tggctttacg ccgcaaggtt ggtgcgcgag tgatccagtt accttcaggc aacataccaa
    39421 caatctcgga gtgcgcatgc tgcccaatct ggcggatcag tgtctttcgg taagcatcgg
    39481 gcatccagtc ctgtggctcg atagccgttt cctgggctat ccgttgctca aagcgttctt
    39541 cttggatcac gtcatcacct ttacgattcc agttttcgtg aattaattaa aaacacgaat
    39601 cacattgttt tatgaaagtt acacaatggt taactaaaat cacaaatttt gtatgcttga
    39661 actgtgacgg atttcgcacc ctatttttat aaatcattat ttatcagtgc attaatgttt
    39721 tccgcagttg ctatacagat cgcatagtta acatttcgtt aaaagatccc ttgcttttta
    39781 tgattcgcga tttaactatt agcaacagaa atgtgaaaca tctggagagt agcgatgcag
    39841 cagttagcca gtttcttatc cggtacctgg cagtctggcc ggggccgtag ccgtttgatt
    39901 catcacgcta ttagcggcga ggcgttatgg gaagtgacca gtgaaggtct tgatatggcg
    39961 gctgcccgcc agtttgccat tgaaaaaggt gcccccgccc tccgcgcgat gacctttatc
    40021 gaacgtgcgg cgatgcttaa agcggtcgct aaacatctgc tgagtgaaaa agagcgcttc
    40081 tatgctcttt ctgcgcaaac aggcgcaacg cgggcagaca gttgggttga tattgaaggt
    40141 ggcattggga cgttatttac ttacgccagc ctcggtagcc gggagctgcc tgacgatacg
    40201 ctgtggccgg aagatgaatt gatcccctta tcgaaagaag gtggatttgc cgcgcgccat
    40261 gtactgacct caaagtcagg cgtggcagtg catattaacg cctttaactt cccctgctgg
    40321 ggaatgctgg aaaagctggc accaacgtgg ctgggcggaa tgccagccat catcaaacca
    40381 gctaccgcga cggcccaact gactcaggcg atggtgaaat caattgtcga tagtggtctt
    40441 gttcccgaag gcgcaattag tctgatctgc ggtagtgctg gcgacttgtt ggatcatctg
    40501 gacagccagg atgtggtgac tttcacgggg tcagcggcga ccggacagat gctgcgagtt
    40561 cagccaaata tcgtcgccaa atctatcccc ttcactatgg aagctgattc cctgaactgc
    40621 tgcgtactgg gcgaagatgt caccccggat caaccggagt ttgcgctgtt tattcgtgaa
    40681 gttgtgcgtg agatgaccac aaaagccggg caaaaatgta cggcaatccg gcggattatt
    40741 gtgccgcagg cattggttaa tgctgtcagt gatgctctgg ttgcgcgatt acagaaagtc
    40801 gtggtcggtg atcctgctca ggaaggcgtg aaaatgggcg cactggtaaa tgctgagcag
    40861 cgtgccgatg tgcaggaaaa agtgaacata ttgctggctg caggatgcga gattcgcctc
    40921 ggtggtcagg cggatttatc tgctgcgggt gccttcttcc cgccaacctt attgtactgt
    40981 ccgcagccgg atgaagcacc ggcggtacat gcaacagaag cctttggccc tgtcgcaacg
    41041 ctgatgccag cacaaaacca gcgacatgct ctgcaactgg cttgtgcagg cggcggtagc
    41101 cttgcgggaa cgctggtgac ggctgatccg caaattgcgc gtcagtttat tgcagacgcg
    41161 gcacgtacgc atgggcgaat tcagatcctc aatgaagagt cggcaaaaga atccaccggg
    41221 catggctccc cactgccaca actggtacat ggtgggcctg gtcgcgcagg aggcggtgaa
    41281 gaattaggtg gtttacgagc ggtgaaacat tacatgcagc gaaccgctgt tcagggtagt
    41341 ccgacgatgc ttgccgctat cagtaaacag tgggtgcgcg gtgcgaaagt cgaagaagat
    41401 cgtattcatc cgttccgcaa atattttgag gagctgcaac caggcgacag cctgttgact
    41461 ccccgccgca caatgacaga ggccgatatt gttaactttg cttgcctcag cggcgatcat
    41521 ttctatgcac atatggataa aattgctgct gccgaatcta tttttggtga gcgtgtggta
    41581 catggatatt ttgtgctttc tgcggctgcg ggtctgtttg tcgatgccgg tgtcggtccg
    41641 gtcatagcta actacgggct ggaaaacttg cgttttatcg aacccgtaaa accaggcgat
    41701 accatccagg tgcgtctcac ctgtaagcgc aagacgctga aaaaacagcg tagcgcagaa
    41761 gaaaaaccaa caggtgtggt ggaatgggcg gtagaggtat tcaatcagca tcaaaccccg
    41821 gtggcgctgt attcaattct gacgctggtg gccaggcagc acggtgattt tgtcgattaa
    41881 tcggtgaatg aagggcaacg gcgaatagtt gcccttttat ttcactaaat tttgtgacgt
    41941 tgtcacatta tgcatgatgt gtacatctat tttcagggca tccactgtat gaaaagctgg
    42001 cacacctgcc aaacaacctg gcaggtgcag gcaatcccct ttgcatcagt actgataatg
    42061 tgaacctgac taaaccgccc acagagcgcg gttgctaaca agaacacaac atctgacgag
    42121 gttaataatg ggaagcccct ctctgtattc tgcccgtaaa acaaccctgg cgttggcagt
    42181 cgccttaagt ttcgcctggc aagcgccggt atttgcccac ggtggtgaag cgcatatggt
    42241 gccaatggat aaaacgctta aagaatttgg tgccgatgtg cagtgggacg actacgccca
    42301 gctctttacc ctgattaaag atggcgcgta cgtgaaagtg aagcctggtg cgcaaacagc
    42361 aattgttaat ggtcagcctc tggcactgca agtaccggta gtgatgaaag acaataaagc
    42421 ctgggtttct gacaccttta ttaacgatgt tttccagtcc gggctggatc aaacctttca
    42481 ggtagaaaag cgccctcacc cacttaatgc gctaactgcg gacgaaatta aacaggccgt
    42541 tgaaattgtt aaagcttccg cggacttcaa acccaatacc cgttttactg agatctccct
    42601 gctaccgcca gataaagaag ctgtctgggc gtttgcgctg gaaaacaaac cggttgacca
    42661 gccacgcaaa gccgacgtca ttatgctcga cggcaaacat atcatcgaag cggtggtgga
    42721 tctgcaaaac aacaaactgc tctcctggca acccattaaa gacgcccacg gtatggtgtt
    42781 gctggatgat ttcgccagtg tgcagaacat tattaacaac agtgaagaat ttgccgctgc
    42841 cgtgaagaag cgcggtatta ctgatgcgaa gaaagtgatt accacgccgc tgaccgtagg
    42901 ttatttcgat ggtaaagatg gcctgaaaca agatgcccgg ttgctcaaag tcatcagcta
    42961 tcttgatgtc ggtgatggca actactgggc acatcccatc gaaaacctgg tggcggtcgt
    43021 tgatttagaa cagaaaaaaa tcgttaagat tgaagaaggt ccggtagttc cggtgccaat
    43081 gaccgcacgc ccatttgatg gccgtgaccg cgttgctccg gcagttaagc ctatgcaaat
    43141 cattgagcct gaaggtaaaa attacaccat tactggcgat atgattcact ggcggaactg
    43201 ggattttcac ctcagcatga actcgcgcgt cggacctatg atctccaccg tgacttataa
    43261 cgacaatggc accaaacgca aagtcatgta cgaaggttct ctcggcggca tgattgtgcc
    43321 ttacggtgat cctgatattg gctggtactt taaagcgtat ctggactctg gtgactacgg
    43381 tatgggcacg ctaacctcac caattgctcg tggtagagat gccccgtcta acgcagtgct
    43441 ccttaatgaa accatcgccg actacactgg cgtgccgatg gagatccctc gcgctatcgc
    43501 ggtatttgaa cgttatgccg ggcctgagta taagcatcag gaaatgggcc agcccaacgt
    43561 cagtaccgaa cgccgggagt tagtggtgcg ctggatcagt acagtgggta actatgacta
    43621 catttttgac tggatcttcc atgaaaacgg cactattggc attgatgccg gtgctacggg
    43681 catcgaagcg gtgaaaggtg ttaaagcgaa aaccatgcac gatgagacgg cgaaagatga
    43741 cacgcgctac ggcacgctta tcgatcacaa tatcgtgggt actacacacc aacatattta
    43801 taatttccgc ctcgatctgg atgtagatgg cgagaataac agcctggtgg cgatggaccc
    43861 agtggtaaaa ccgaatactg ccggtggccc acgcaccagt accatgcaag ttaatcagta
    43921 caacatcggc aatgaacagg atgccgcgca gaagtttgat ccgggcacga ttcgtctgtt
    43981 gagtaacctg aacaaagaga atcgcatggg caatccagtt tcctatcaaa ttattcctta
    44041 tgcaggtggt actcacccgg tagcaaaagg tgcccagttc gcgccggacg agtggatcta
    44101 tcatcgttta agctttatgg acaagcagct ctgggtaacg cgttatcacc ctggcgagcg
    44161 tttcccggaa ggcaaatatc cgaaccgttc cactcatgac accggtcttg gacaatacag
    44221 taaggataac gagtcgctgg acaacaccga cgctgttatc tggatgacca ccggcaccac
    44281 acatgtggcc cgtgccgaag agtggccgat tatgccgacc gaatgggtac atactctgct
    44341 taaaccatgg aacttctttg acgaaacgcc aacgctaggg gcgctgaaga aagataagtg
    44401 attgtttcag acaaaaaaac ggcaccaggt gccgtttttt acttatgagc gaaccagatt
    44461 aataccgtac acacaccgac ttagtttcac accaaccgtc cagccagtcg gggccaaaat
    44521 cacggcccgt tcctgactgc ttcatcccac caaacggtaa gttagcgtca attaaggtat
    44581 ggctgtttac ccacaccgta cctgcctgta aacgatcgct atattccaga gcctgggaga
    44641 gattttgcgt ccagacactg gcagttaagc catattccgt gtcgtttgcc agttgtaacg
    44701 cctcttctcc atccgctact cgcaccaggt ttaccaccgg accaaacacc tcttcacgag
    44761 ttaaacgcaa tttagcatcg ggatttacca ccagcgttgg cgcaacataa tacccctctc
    44821 cggctggtcc attcgacccg cgaatcagct ctgcttgctg tgcctgcgca tcgtcgagga
    44881 atgaacacac tttgtcgcag tgcgcacgag aaaccacagg gttaatctgt gcaacaggtg
    44941 acatccccgg tcccacttgc aacgatttta ccgcctgctc aaatccacta accagcgtgt
    45001 caaacaacgg cgcttcaata taaattcgcg aactggcggc gcatacttgc ccttgattca
    45061 ggaagcttcc ggtcatcaag ccttcaataa cccattgcgg atcagcatct tttaatacaa
    45121 ttgccgggtt tttaccgccc agttccagcg ttacacgcgt taagtgatca gcagcagttc
    45181 tggcaatacc ttttcccgtc gcggttgaac cggtaaaact gattttcgca acatgaggat
    45241 gtgacgtcag ggccgcgccg catacagcac ctgacccggt gaccacatta aaaacgccat
    45301 cagggatacc agcctcgctg gccagttccg ccacgcgcaa catcgtcagt ggcgtggttt
    45361 ccgaaggctt aatcacgatt gaacagcctg ctgccagtgc tggcatcacc ttccacatac
    45421 caatcatcaa cggaaagttc catggcacaa ttcccgccac tacgccaacc ggctctttac
    45481 gcgtccaggc ctgataacgc gccccctggg gtaagggaat cgacaagtcc agcgttttac
    45541 ccgcgatttt ggtcgttaac ccggcggtat aacgcatcca gttcagcgta cagcccactt
    45601 caaaagcacg ggaaatggca attgacttgc cttgctccag ggtttccagt tgcgccagct
    45661 cctcactgtg ctgttccacc agatcggcaa aacgtagcag aatacgttca cgctctgcgg
    45721 gtaatcgccc ggcccagcga cgcgagacaa aggcccgcca ggcagacatg actgcgttat
    45781 ctacatccgc ttcgttggca tcagcagtag acgcaatttc ttgcccggtg gccggatcaa
    45841 agatcgccaa ccgtttttca ctttgtgcgg ggcctggacg accatcaata taaagaccgt
    45901 gttgacgatc gagaaactgt tggacctggc ttaatactgc tacatgcggc tctgtcatca
    45961 cttttcctta ttatttaccc agtgtgattt cagtgtacgc agcgacaaga aaagtcactt
    46021 ttttcgctgt gacattcgct ttgtcagctg tgacaagctc cgcaaatcgt gacaataacc
    46081 gcttatgtct ctatgcctga caagacttat ttcctatagt caggctcatt agcttcgttt
    46141 attgcaacac aaatgcaaca ataaaaatac atttcacaga gcgaaaacgt gccatgaacc
    46201 ccgcagtgga taatgagttt cagcaatggc tttcccaaat caatcaggta tgcggaaatt
    46261 ttaccggacg cctgctgact gagcgttaca cgggtgtact ggaaacgcat tttgccaaag
    46321 gactaaagct gagtaccgtg acaaccagcg gggtgaattt atcccgcacc tggcaggaag
    46381 taaaaggcag cgacgatgcc tggttttaca ccgtttttca gcttagtggt caggcaataa
    46441 tggagcagga tgagcgtcag gtgcagattg gcgctggcga tattacgtta ctcgatgcct
    46501 cacgcccctg ttcgctttac tggcaggagt cttctaaaca gatttcatta cttttgccac
    46561 gcactctgct ggaacaatat tttccccatc aaaaacctgt ctgcgcagaa agactggacg
    46621 ctgacttacc catggtgcaa ctcagtcatc gcctgttaca ggagagcatg aataatccgg
    46681 cactttctga aacagaaagt gaagctgcgc tacaggcgat ggtgtgtctg ctgcgcccgg
    46741 tacttcatca gcgggaatct gttcaacctc gtcgtgaacg tcagtttcaa aaagtggtta
    46801 cgttgataga cgataatatt cgcgaagaga tattacgccc ggagtggata gccggagaga
    46861 caggtatgtc agtacgtagt ttgtaccgaa tgtttgccga taaaggtttg gtagtcgcgc
    46921 aatatattcg taaccgtcgt ctcgattttt gtgcagatgc gattcgccat gccgcagatg
    46981 atgaaaaact ggcaggcatc ggctttcatt ggggattttc tgaccagagt catttttcaa
    47041 ccgtatttaa gcaacgcttt gggatgacgc caggcgagta tcgacgtaaa ttccgctaac
    47101 taattggcgt tgtgtgtact gcaacgccaa ttagttaaaa cagatatttg actatgcatt
    47161 tttcagggcg aaaggcaatt tgacaggagt ttttgaatat tcaccttgtt tcaggaaaat
    47221 agatcaatcg ctttctcctg tagcgttatc ccgatattgc ggttttgcta ttaaaatttt
    47281 cgcacccatt taccgtttat cccttgtaca tattcccccg gtttggcccg agctacgagc
    47341 ttttgcccgg cgagtttcgc gatatcatct acagacacat tattttgctt tgccagttgt
    47401 tggtaactcg ctttacgttc ggcattaatg tcggttacta atttctctgt ttcagcatcc
    47461 gttttcagcg caaccagata accataaaat gtttcaccta cccgcccctg agttctggct
    47521 tcatccagag tcaatgccat tacattgctg cttaccagcc caacaagaaa cgcacaaaga
    47581 agtaatgttt tcttcatcat cgcctcagaa aagatcgcta cgagtttcaa gcagctcttc
    47641 gacatctttg tctgccttga tgatgatctc atgctcaatt ttaacgttca tattgatagt
    47701 gatcggttcc ttgggcgcag cgacttcaat acgcggcgta caggcagcca gcataaaaga
    47761 tgacgtcaac gcagccagta aaattttcat tgtttttcct cacactcttt tccttgcgga
    47821 cagtcatttc ccggcagacg tgcgttctgc tccaaccatg cctggagatt atcgccaaag
    47881 cgtaaactgc gccacagcgt aaaaatattc tcttcatgat agtaattaag gtttaccgta
    47941 ccgcttttac catcaacgcg actggtacct gtaatgttgg cctgcatggt taataaaccg
    48001 agattatcta agttaatttt tgtcgatgac cggctaattt ccatatagcg caaccagtta
    48061 attgctgaac ccgcagtcat attgtctttc accaccgcat ctgcggtgtc tttatccagc
    48121 cgcaaggtca ttggcccgct atttgccagc caaccatctt tcactatcca tttttcgttg
    48181 tttagccata acggcaatgc accactaaat gccccggaca tggcgaattg tttcggattg
    48241 acggcgctaa ccagttcgct ggatgagaga ttattcagcc gcaacagcgc cgggtcatgt
    48301 tgcggcatac gtaattgttt catcagtacg ttaccgccta acacatcgac gctaacatca
    48361 gtcaacagca agggttcttc ttcagtccac ggataacgcc cttgcaaatc agccgtaata
    48421 tttttcgctg tcaccagatt aatcacttcg gcaattcgca acgtaacggg gccgcgagtc
    48481 cccagatgcc aggctccatc ggcaaaacgg aaaggcagga caaaatcgac accgttaacc
    48541 tgattatctg gcatccaggc actaccgcct ttcaacacgc cgtgtcctcc cgcgcggaat
    48601 ccttgttcag gcgcagcaga aaatgcaacc tgagcataca gttcaccatc gcgtaagttc
    48661 atcttccagt cgggtggcac cagcggctgg aatacagtca gtgattgttt tggccaccag
    48721 gcgttaccgc gcagacgaat accgtcccag cgaccattta cccgaaccgg gccaatctca
    48781 ccagcatgta aatcgccttt aaagaggaaa tacgtcggat cgcgcccatc gacgctaaat
    48841 tttaaggttg atggcggtaa cacactgccg ccagtgaaca gcgtttgccc ggcgtccagt
    48901 gacagcgcgc cgctgaagga gggatgctgt gcgtcacgta cccagacgac gggcttgtcg
    48961 agaattaatc gcggcttttc taccgtcatc gtaccgtatt gtaactggtc gaaaccggtg
    49021 gagagatcgg tcagcgtaat cgtgctgtca tgccactcac cttttcctgc gacatcccag
    49081 gtggcattca tcggtgtaaa actccctttt ccccagtagc gccactgcca gcggccagcg
    49141 tcagggagaa aatcattcgc cagaccatcc atatgcagca cgaaatcgcc cagttcattt
    49201 tcatgcgcct gcaaaatggc ctgcagacgt ccgtcaacac cacgttgggt gacttttaca
    49261 cccgctaaag gccagcggat ttcatcgatg tccagcgaat cgatgactct tccctttgaa
    49321 cgaagtaacg cgcctggctc aaaggccagc gttgggtcag tcagacttcc acttagctgc
    49381 gcgggtaagc gggcatataa aatgaggtcc gcctgtttcg cttcaccggt cagctgcaga
    49441 ggcagctggc tgttatccat gcttaatttt cctgggccaa aatttagcac cgcgttgcct
    49501 ttacccgctt gcccctgggt cagcacactc agtcgtccgc tgaccagagc gttctcgagc
    49561 cctgcctgcc agttgtcgac tttgacaccc agtcggccac tcaaaggaaa acctgcatac
    49621 ggccaactcc agcgaccatc gcttacggtc aattgttgac gagtaatttg ccacggcaaa
    49681 tcgagcaacg gatcgccgtt atcccgtgcc agcacaatca attgcccgct attttcctgc
    49741 cagtccagct ctgcatccac cagtgacggt tcctgcggca agtttaacgt cgcagtagca
    49801 tgcccactta caggaagtcc atccggcacg agcggcatag taaattcccc caccagttta
    49861 accggcggct gattttcaaa cgcgacgaca tccagttcgc tgactgtaag ttgttgccct
    49921 ttcagctggc cttgaaattt aactttttcg ccctgataac gcagttgctg gatatcagag
    49981 gttaatgcga gagagagttt tccctgccat tcctgccagg gagaaaaaat cagtttatcg
    50041 atattgatcc aggtgttagg cagcatggac tgccactgcg cgagggtttt tggagcagct
    50101 ggcgattgct ccgtctgcgg caatttcgcc agacaagcag aatcaagttc taccatgccg
    50161 acgttcaata accagcggct gggatgtgaa aggctggcgt tggtgatatg cgcaagctga
    50221 caatctccca ccagataacg gagatcggga atgattaaac ctttacgcgt aatgcgtggg
    50281 ctttcatcta atgcaatacg tgtcccgagc ggtagccaga tgcccgccag cgtgggaacc
    50341 cacagcccga gcgtcatcag cagcgtcaac ggcacaagaa taatcagtaa taacagcgcg
    50401 agaacggctt tatatttacc cagcatgggt agttaatatc ctgatttagc gaaaaattaa
    50461 gcattcaata cgggtattgt ggcatgttta accgttcagt tgaaggttgc gcctacacta
    50521 agcatagttg ttgatgaatt tttcaatatc gccatagctt tcaattatat ttgaaatttt
    50581 gtaaaatatt tttagtagct taaatgtgat tcaacatcac tggagaaagt cttatgaaac
    50641 tcgccgttta tagcacaaaa cagtacgaca agaagtacct gcaacaggtg aacgagtcct
    50701 ttggctttga gctggaattt tttgactttc tgctgacgga aaaaaccgct aaaactgcca
    50761 atggctgcga agcggtatgt attttcgtaa acgatgacgg cagccgcccg gtgctggaag
    50821 agctgaaaaa gcacggcgtt aaatatatcg ccctgcgctg tgccggtttc aataacgtcg
    50881 accttgacgc ggcaaaagaa ctggggctga aagtagtccg tgttccagcc tatgatccag
    50941 aggccgttgc tgaacacgcc atcggtatga tgatgacgct gaaccgccgt attcaccgcg
    51001 cgtatcagcg tacccgtgac gctaacttct ctctggaagg tctgaccggc tttactatgt
    51061 atggcaaaac ggcaggcgtt atcggtaccg gtaaaatcgg tgtggcgatg ctgcgcattc
    51121 tgaaaggttt tggtatgcgt ctgctggcgt tcgatccgta tccaagtgca gcggcgctgg
    51181 aactcggtgt ggagtatgtc gatctgccaa ccctgttctc tgaatcagac gttatctctc
    51241 tgcactgccc gctgacaccg gaaaactacc atctgttgaa cgaagccgcc ttcgatcaga
    51301 tgaaaaatgg tgtgatgatc gtcaatacca gtcgcggtgc attgattgat tctcaggcag
    51361 caattgaagc gctgaaaaat cagaaaattg gttcgttggg tatggacgtg tatgagaacg
    51421 aacgcgatct gttctttgaa gataaatcca acgacgtgat ccaggatgac gtattccgtc
    51481 gcctgtctgc ctgccacaac gtgctgttta ccgggcacca ggcattcctg acagcagaag
    51541 ctctgaccag tatttctcag actacgctgc aaaacttaag caatctggaa aaaggtgaaa
    51601 cctgcccgaa cgaactggtt taatcttgcc gctcccctgc aatccagggg agctgattca
    51661 gataatcccc aatgaccttt cattctctat tcttaaaata gtcctgagtc agaaactgta
    51721 attgagaacc acaatgaaga aagtagccgc gtttgttgcg ctaagcctgc tgatggcggg
    51781 atgtgtaagt aatgacaaaa ttgctgttac gccagaacag ctacagcatc atcgctttgt
    51841 gctggaaagc gtaaacggta agcccgtgac cagcgataaa aatccgccag aaatcagctt
    51901 tggtgaaaaa atgatgattt ccggcagcat gtgtaaccgc tttagcggtg aaggcaaact
    51961 gtctaatggt gaactgacag ccaaagggct ggcaatgacc cgtatgatgt gcgctaaccc
    52021 gcagcttaat gaactcgata acaccattag cgaaatgctg aaagaaggtg cacaagtgga
    52081 tctgaccgcg aaccagttaa cgctggcgac cgcgaaacag acattaactt ataagctggc
    52141 ggatttaatg aattaatagc tgccacagct cccggcggca agtgactgtt cgctacagcg
    52201 tttgccgttg ggtaatgcac acatcccaat cgccgtacca tccagttgac gggcaacaga
    52261 aagcgaaccg ccgatcattg cacaatttgc ttctccacta ctggacatcg acgcttttaa
    52321 acctggcgct acgtgcgccg cagtcgcctg ctgaacaggt tcactactac acgccgacaa
    52381 caataaagcg gcacacccta cccaaaacgc tgctcgcatc ttttcttcct ctgatcttca
    52441 agccaaacga caccgccata aataataggc agcacagagg gcgacgtcga gagctgtcct
    52501 gcgcgttgcc ccgcattttt acttttttat ggctattttt ttgccctctg tttgatcaaa
    52561 acattcatta cgctgatgtg ggggacacaa aagcgaaaat gcagaagaaa gccatttgct
    52621 aaaattgaag gattactact gggcgcgcag caatttcgtg cgcccctcat ttgcgcaatg
    52681 taagggtgtc atatgattac tattgacggt aatggcgcgg ttgcttcggt ggcgtttcgc
    52741 accagtgaag ttatcgccat ctaccctatt acccccagtt ccacgatggc agaacaggct
    52801 gatgcctggg ccggaaacgg cttaaagaac gtttggggag acacaccacg cgtagttgaa
    52861 atgcagtcgg aagcgggtgc tatcgctacc gtgcatggcg ctttgcagac gggtgccctt
    52921 tcaacatcgt ttacgtcatc gcagggtttg ctgctgatga tcccgacgct gtacaaactg
    52981 gcaggcgaac tgacgccatt tgtcctgcat gtagcggcac gtaccgttgc cacacatgca
    53041 ctttctattt ttggcgatca ttccgacgtt atggcggtgc gccagacggg ttgcgcgatg
    53101 ttgtgtgcgg ctaacgtcca ggaagcgcaa gattttgctc tcatttcgca catcgcaacg
    53161 ctgaagagcc gcgtgccatt tattcatttc tttgatggtt tccgcacgtc ccacgaaatc
    53221 aataaaattg tcccgctggc cgatgacact attcttgatc tcatgccgca ggccgaaatt
    53281 gatgctcatc gcgcccgggc gctcaacccg gaacatccgg tgatccgcgg tacgtccgcc
    53341 aatcctgaca cttatttcca gtctcgcgaa gccaccaacc catggtacga cgcggtctat
    53401 gaccatgttg aacaggcgat gaatgatttc tctgccgcga caggtcgtca gtatcagccg
    53461 tttgaatatt acgggcatcc gcaagcggaa cgggtgatta tcctgatggg ctctgccatt
    53521 ggcacctgtg aagaagtggt tgatgaattg ctaacccgtg gcgaaaaagt tggcgtgctg
    53581 aaagttcgcc tgtaccgtcc cttctccgcc aaacacttgc tgcaagctct gccgggatcc
    53641 gtacgcagcg tggcggtact agacagaacc aaagaacccg gtgcccaggc agaaccgctc
    53701 tatctggatg taatgaccgc actggcagaa gcctttaata atggcgagcg cgaaactctg
    53761 ccccgtgtca ttggtgggcg ctatggtctt tcatccaaag aatttggccc ggactgtgta
    53821 ctggcggtat ttgccgagct caacgcggct aaaccgaaag cgcgctttac ggttggtatt
    53881 tacgatgatg tgaccaatct gtcactgccg ttgccggaaa acaccctgcc aaactcggcg
    53941 aaactggaag ccttgtttta tggccttggt agtgatggca gcgtttccgc gaccaaaaac
    54001 aatatcaaga ttatcggtaa ttccacgccg tggtacgcac agggctattt tgtttacgac
    54061 tccaaaaagg cgggcggcct gacggtttct caccttcgcg tgagcgaaca gccgattcgt
    54121 tccgcttatc tcatttccca ggctgatttt gttggctgcc accagttgca gtttatcgat
    54181 aaatatcaga tggctgagcg tttaaaacct ggcggcattt tcctgctcaa cacgccgtac
    54241 agcgcagatg aagtgtggtc gcgcttgccg caggaagttc aggccgtgct aaatcagaaa
    54301 aaagcgcgct tctatgtgat taacgcggcg aaaatcgccc gcgaatgtgg cctggcggcc
    54361 cgtattaata ccgtcatgca gatggctttt ttccatctga cgcaaattct gcctggcgat
    54421 agcgccctcg cagaattgca gggtgcgatt gccaaaagtt acagtagcaa aggccaggat
    54481 ctggtggaac gcaactggca ggctctggcg ctggcgcgtg aatccgtaga agaagttccg
    54541 ttgcaaccgg taaatccgca cagcgccaat cgaccgccag tggtttccga tgccgcccct
    54601 gatttcgtga aaaccgtaac cgcagcgatg ctcgcagggc ttggtgatgc cctccccgtt
    54661 tcggcgctgc cgccagacgg cacctggccg atgggcacca ctcgctggga aaaacgcaat
    54721 atcgccgaag agatccccat ctggaaagag gaactctgta cccaatgtaa ccactgcgtt
    54781 gccgcttgcc cacactcagc tattcgcgca aaagtggtgc cgcctgaagc gatggaaaac
    54841 gcccctgcca gcctgcattc gctggatgtg aaatcgcgtg atatgcgcgg gcagaaatat
    54901 gtcttgcagg tggctccgga agattgcacc ggttgtaacc tgtgcgtcga agtttgcccg
    54961 gcgaaagacc gtcagaatcc agagattaaa gccatcaata tgatgtcgcg cctggaacat
    55021 gtcgaagaag agaaaatcaa ttacgatttc ttcctcaacc tgccagaaat cgaccgtagc
    55081 aaactggaac gtattgatat tcgtacatcg cagctgatta caccgctgtt tgaatattca
    55141 ggtgcttgct ccggttgtgg cgagacgccg tatattaaat tgctgactca gctctatggc
    55201 gaccggatgt tgatcgctaa cgccaccggc tgttcttcaa tttatggcgg taacctgccc
    55261 tctacaccgt ataccaccga tgccaacggt cgtgggccgg catgggcgaa ctctctgttt
    55321 gaagataatg ccgaatttgg ccttggtttc cgcctgacgg tcgatcaaca ccgtgtccgc
    55381 gtgctgcgtc tgctggatca atttgccgat aaaatcccgg cggaattact gacagcgttg
    55441 aaatcagacg ctacgccaga ggttcgtcga gaacaggtcg cagctttacg ccagcaactc
    55501 aacgatgttg ccgaagcaca tgaactgctg cgtgacgcag atgcactggt ggaaaaatca
    55561 atctggctga ttggtggcga cggctgggct tacgatatcg gctttggcgg tctggatcat
    55621 gtattgagtt tgacggaaaa cgtcaacatt ctggtgctgg atacgcaatg ctattccaac
    55681 accggtggtc aggcgtcgaa agcgacaccg ctgggtgcag taactaaatt tggcgagcac
    55741 ggcaaacgta aagcgcgtaa agatcttggc gtcagtatga tgatgtacgg tcatgtttat
    55801 gtggcgcaga tttctctcgg cgcgcagctc aaccagacgg tgaaagcgat tcaggaagcg
    55861 gaagcgtatc cggggccatc gctgatcatc gcttatagcc catgtgaaga gcatggttac
    55921 gatctggcac tcagccacga ccagatgcgc caactcacag ctaccggctt ctggccgcta
    55981 tatcgcttcg atccgcgtcg tgccgatgaa ggcaaactgc cgctggcgct ggattcacgc
    56041 ccgccgtcag tagcactgga agaaacgtta cttcacgagc aacgtttccg tcggctgaat
    56101 tcgcagcagc cagaagtggc agaacagtta tggaaagatg ctgcagctga tttgcaaaaa
    56161 cgctatgact tcctggcaca aatggccgga aaagcggaaa aaagcaacac cgattaaatg
    56221 ctctggataa ggattatcca attctaaaaa aaaagcccgg acgactgttc gggcttgtct
    56281 ttttatatgt tggaaaatca gtggcaatgc aatggcccaa cagaaaataa aatctgtgac
    56341 aataaaggca tataac
//
LOCUS       DAPGWB010000013        50925 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.013, whole genome shotgun sequence.
ACCESSION   DAPGWB010000013 DAPGWB010000000
VERSION     DAPGWB010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 50925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 50925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..50925
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.013"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(15..914)
                     /gene="pgrR"
                     /locus_tag="RHX79_000775"
     CDS             complement(15..914)
                     /gene="pgrR"
                     /locus_tag="RHX79_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator PgrR"
                     /protein_id="HDV2195980.1"
                     /translation="MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEE
                     RLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSALASLSELQNRPSGTIRITTVE
                     HAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRI
                     GPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVR
                     MEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYY
                     PHRRHAGSAFSLFIDRLKYKGAV"
     gene            1052..1972
                     /locus_tag="RHX79_000776"
     CDS             1052..1972
                     /locus_tag="RHX79_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415843.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV2195981.1"
                     /translation="MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVVSHPGG
                     GVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTT
                     LSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSMFRNGWENNVKSID
                     ALPYVEAGSNARTSDISSGEYAVMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPG
                     YATLRSLNQIITYDAYHMAEVYLTQPMQIVAGSQAGSKWMSDDLYDRASSQDKRYHIV
                     EGANHMDLYDGKAYVAEAISVLAPFFEETL"
     gene            1972..2904
                     /locus_tag="RHX79_000777"
     CDS             1972..2904
                     /locus_tag="RHX79_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000680621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV2195982.1"
                     /translation="MKHIQIRNSDMAWHIAANIQFPPNFDESKQYPAIISVHPFGSCK
                     EQTSGNIYGKALAEKGYLVLAYDASFQGESGGEPRWIEDPTQRVEDISRVIDYAVTLP
                     YVNAERIGVLGVCGGGGYAINAALTEKRIKAVVSITGVNIGRLFREGFSNYDPIGALN
                     AMASQRTKEARGGELQINELLPASLDAAKAHGLTERDVYEATDYYKTPRGQQPGGATK
                     MLFSHAQKTLAWDAFAFTEVLLTQPVMVVVGEKVGAFGAYRDGLEVYGRAMVSQDRQL
                     VSLPDFSHYELYDKPEAVQEALEKVIPFFNTHLG"
     gene            2922..3560
                     /locus_tag="RHX79_000778"
     CDS             2922..3560
                     /locus_tag="RHX79_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707232.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDV2195983.1"
                     /translation="MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP
                     TNSKIIMGDVLNHAALKQAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVL
                     SLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYE
                     LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTDGDKPFFM"
     gene            3851..4579
                     /gene="mpaA"
                     /locus_tag="RHX79_000779"
     CDS             3851..4579
                     /gene="mpaA"
                     /locus_tag="RHX79_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415842.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide amidase MpaA"
                     /protein_id="HDV2195984.1"
                     /translation="MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLI
                     LAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFP
                     AANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPL
                     ACIEDPRHSELGEWLSQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDE
                     ASEKYLFAMANLLRWHPKDAIRPS"
     gene            complement(4554..5519)
                     /gene="ycjG"
                     /locus_tag="RHX79_000780"
     CDS             complement(4554..5519)
                     /gene="ycjG"
                     /locus_tag="RHX79_000780"
                     /EC_number="5.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707230.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-Ala-D/L-Glu epimerase"
                     /protein_id="HDV2195985.1"
                     /translation="MRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELEEEGIKGTGE
                     CTPYPRYGESDASVMAQIMSVVPQLEKGLTREELQKILPAGAARNALDCALWDLAARK
                     QQQSLADLIGITLPETVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISER
                     MVAIRTAVPDATLIVDANESWRAEGLAARCQLLADLGVAMLEQPLPAQDDAALENFIH
                     PLPICADESCHTRSNLKALKGRYEMVNIKLDKTGGLTEALALATEARAQGFRLMLGCM
                     LCTSRAISAALPLVPQVSFADLDGPTWLAVDVEPALQFTTGELHL"
     gene            5638..6144
                     /gene="tpx"
                     /locus_tag="RHX79_000781"
     CDS             5638..6144
                     /gene="tpx"
                     /locus_tag="RHX79_000781"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDV2195986.1"
                     /translation="MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFA
                     GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNN
                     VITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYE
                     AALAVLKA"
     gene            complement(6188..7729)
                     /gene="tyrR"
                     /locus_tag="RHX79_000782"
     CDS             complement(6188..7729)
                     /gene="tyrR"
                     /locus_tag="RHX79_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TyrR"
                     /protein_id="HDV2195987.1"
                     /translation="MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFA
                     ELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKV
                     DMANPASCQLFAQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLME
                     ITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVE
                     QAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELF
                     GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVR
                     VICATQKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ
                     GVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATV
                     AVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ
                     KKNEE"
     gene            complement(7877..8938)
                     /locus_tag="RHX79_000783"
     CDS             complement(7877..8938)
                     /locus_tag="RHX79_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HDV2195988.1"
                     /translation="MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDE
                     APEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVAL
                     GGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQ
                     QAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMI
                     AVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVR
                     EVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRR
                     QLIGQVKETLQKGKTPSEK"
     gene            complement(8935..10332)
                     /locus_tag="RHX79_000784"
     CDS             complement(8935..10332)
                     /locus_tag="RHX79_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HDV2195989.1"
                     /translation="MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLL
                     NIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGV
                     SEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL
                     NGQRGEWSVKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRFVL
                     PGDMAGAPALQFFPWPDVDAWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF
                     LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF
                     AATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNG
                     EKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHI
                     RLDAALEFLIGDKLR"
     gene            10487..11485
                     /locus_tag="RHX79_000785"
     CDS             10487..11485
                     /locus_tag="RHX79_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDV2195990.1"
                     /translation="MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEEL
                     QYQPNKLARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQT
                     SHNPAEDLQKCESKIKQKMIKGIIMLSSPADESFFAQLDKYDIPVVVIGKVEGQYAHV
                     YSVDTDNFGDSIALTDALIESGHQNIACLHAPLDVHVSVDRVNGYKQSLSAHNIAVRD
                     KWIVDGGYTHETALQAARQLLSQSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAV
                     VGYSNETLSFILTPAPGGIDVPTQELGQQSCELLFRLISGKPSPQNITVATHMTLK"
     gene            complement(11596..12501)
                     /gene="ompG"
                     /locus_tag="RHX79_000786"
     CDS             complement(11596..12501)
                     /gene="ompG"
                     /locus_tag="RHX79_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monomeric porin OmpG"
                     /protein_id="HDV2195991.1"
                     /translation="MKKLLPCTALVMCAGMACAQAEERNDWHFNIGAMYEIENVEGYG
                     EDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLEND
                     DFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAN
                     DLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYL
                     PLTLGNHSVTPYTRIGLDRWSNWDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYA
                     FEWQDHDEGDSDKFHYAGVGVNYSF"
     gene            complement(12546..13628)
                     /locus_tag="RHX79_000787"
     CDS             complement(12546..13628)
                     /locus_tag="RHX79_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV2195992.1"
                     /translation="MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKS
                     TTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLK
                     MQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDE
                     PLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGA
                     PKTVYNQPANMFVAGFIGSPAMNFIRGTIDGDKFVTETLKLTIPEEKLAVLKTQGSLH
                     KPIVMGIRPEDIHPDAQEENNISAKISVAELTGAEFMLYTTVGGHELVVRAGALNDYH
                     AGENITIHFDMTKCHFFDAETEIAIR"
     gene            complement(13642..14301)
                     /gene="pgmB"
                     /locus_tag="RHX79_000788"
     CDS             complement(13642..14301)
                     /gene="pgmB"
                     /locus_tag="RHX79_000788"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HDV2195993.1"
                     /translation="MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESL
                     KGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVSAVLPGIRSLL
                     ADLRAQQIPVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL
                     GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTDSLTWSRLSAFWQN
                     V"
     gene            complement(14298..16565)
                     /gene="ycjT"
                     /locus_tag="RHX79_000789"
     CDS             complement(14298..16565)
                     /gene="ycjT"
                     /locus_tag="RHX79_000789"
                     /EC_number="2.4.1.230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kojibiose phosphorylase"
                     /protein_id="HDV2195994.1"
                     /translation="MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQ
                     TRGMYLAGLYHRAGKGEINELVNLPDILGMEIAINGEVFSLSREAWQRELDFASGELR
                     RSVVWRTSNGTGYTIASRRFVSADQLPLIVLEITITPLDADASVLISTGIDATQTNHG
                     RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCMVSGDVQQCYTAKERRLQQHTS
                     AQLHAGETVTLQKLVWIDWRDDRQAVLDEWGSASLRQLEMCAQQSYDQLLAVSTENWR
                     QWWQKRRITVNGGEAHDQQALDYALYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWD
                     TEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETP
                     EFAAINIRTGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDGSFIAHEGMALLLETAK
                     FWISRAVRVNDRLEIHDVIGPDEYTEHVNNNAFTSYMAYYNVQQALSIARQFGCSDDA
                     FIHRAEMFLKELRLPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDYSRAEV
                     NEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGL
                     LTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPA
                     LPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLRLNGQLISVAEESVFCLGDF
                     ILPFNGTATTHQEDE"
     gene            complement(16562..17617)
                     /locus_tag="RHX79_000790"
     CDS             complement(16562..17617)
                     /locus_tag="RHX79_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDV2195995.1"
                     /translation="MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSR
                     LSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCE
                     KPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLRDQVTNGVLGEIYVTTARA
                     LRRCGVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQK
                     SCGQFGEWDPATYSVEDSLFGTIEFHNGGILWLETSFALNIREQSIMNVSFCGDKAGA
                     TLFPAHIYTDNNGELMTLMQRELADDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQ
                     LVAALYQSAETGTRVEL"
     gene            complement(17627..18415)
                     /locus_tag="RHX79_000791"
     CDS             complement(17627..18415)
                     /locus_tag="RHX79_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415830.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HDV2195996.1"
                     /translation="MKIGTQNQAFFPENILEKFRYIKEMGFDGFEIDGKLLVNNLEEV
                     KAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILEALAEVGGKGIVVPAAW
                     GMFTFRLPPMTSPRSLDGDRKMVSDSLHVLEQVAARTGTVVYLELLNRYQDHMINTLA
                     DARRYIVENDLKHVQIIGDFYHMNIEEDNLAQALHDNRDLLGHVHIADNHRYQPGSGT
                     LDFHALFEQLRADNYQGYVVYEGRIRAEDPAQAYRDSLAWLRTC"
     gene            complement(18433..19485)
                     /locus_tag="RHX79_000792"
     CDS             complement(18433..19485)
                     /locus_tag="RHX79_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase"
                     /protein_id="HDV2195997.1"
                     /translation="MKKLVATAPRVAALVEYEDRAILANEVKIRVRFGAPKHGTEVVD
                     FRAASPFIDEDFNGEWQMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVTDYAVG
                     DSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDF
                     VVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAYRCDIARRHGADFCLNPIGTDVGKEI
                     KTLTGKQGADVIIETSGYADALQSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNN
                     AKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLIDPVVTFANSPESYMQ
                     YVDQHPEQSIKMGVTF"
     gene            complement(19516..20358)
                     /locus_tag="RHX79_000793"
     CDS             complement(19516..20358)
                     /locus_tag="RHX79_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HDV2195998.1"
                     /translation="MATNKRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKGAKEAIS
                     LHPTLLPQQWTLEHYVDIFNPMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRL
                     RFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFM
                     LKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFAS
                     IFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAG
                     GVKG"
     gene            complement(20345..21226)
                     /locus_tag="RHX79_000794"
     CDS             complement(20345..21226)
                     /locus_tag="RHX79_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDV2195999.1"
                     /translation="MNRLFSGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRL
                     PLNPNIESTFVGVSNYVRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREF
                     RLRKTARSLVILSYVTPSISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPG
                     SSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMP
                     VLATVVTLRTIWMFYMFADVYLLTTKVDILGVYLYKTAFAFNDLGKAAAISVVLFIII
                     FAVILLTRKRVNLNGNK"
     gene            complement(21247..22539)
                     /locus_tag="RHX79_000795"
     CDS             complement(21247..22539)
                     /locus_tag="RHX79_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV2196000.1"
                     /translation="MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQA
                     VISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKE
                     QLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKA
                     GLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEG
                     KITLDTPEMMQALTYYRDLAANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKE
                     GDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMM
                     SPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDV
                     TGSGVVSSMVHNVTVGKADLPGTLQASQKKLDELIEQH"
     gene            complement(22553..24232)
                     /gene="ycjM"
                     /locus_tag="RHX79_000796"
     CDS             complement(22553..24232)
                     /gene="ycjM"
                     /locus_tag="RHX79_000796"
                     /EC_number="2.4.1.352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosylglycerate phosphorylase"
                     /protein_id="HDV2196001.1"
                     /translation="MKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHW
                     DESDVVLITYADQFHSNDLKPLPTFNQFYHQWLQSIFSHVHLLPFYPWSSDDGFSVID
                     YHQVASEAGEWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQHPGFEDFFIAVDP
                     QTDLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCY
                     LAKGAEYVRLDAVGFMWKEPGTSCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPH
                     KDNIAYFGAGDDEAHMVYQFSLPPLVLHAVQKQNVEALCAWAQNLTLPSSNTTWFNFL
                     ASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALS
                     RRESSDEERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKY
                     HSKEITRELNDEATLRHAVYHELSRLITLRRSHNEFHPDNNFTIDTINSSVMRIQRSN
                     ADGNCLTGLFNVSKNIQHVNITNLHGRDLISEVDILGNEITLRPWQVMWIK"
     gene            complement(24445..24759)
                     /gene="pspE"
                     /locus_tag="RHX79_000797"
     CDS             complement(24445..24759)
                     /gene="pspE"
                     /locus_tag="RHX79_000797"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase PspE"
                     /protein_id="HDV2196002.1"
                     /translation="MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIP
                     LKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKV
                     KG"
     gene            complement(24834..25055)
                     /gene="pspD"
                     /locus_tag="RHX79_000798"
     CDS             complement(24834..25055)
                     /gene="pspD"
                     /locus_tag="RHX79_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspD"
                     /protein_id="HDV2196003.1"
                     /translation="MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVA
                     RRPLKMLLAVALEPLLSRAANKLAQRYKR"
     gene            complement(25064..25423)
                     /gene="pspC"
                     /locus_tag="RHX79_000799"
     CDS             complement(25064..25423)
                     /gene="pspC"
                     /locus_tag="RHX79_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspC"
                     /protein_id="HDV2196004.1"
                     /translation="MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLS
                     IFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREME
                     RYVTSDTFTLRSRFRQL"
     gene            complement(25423..25647)
                     /gene="pspB"
                     /locus_tag="RHX79_000800"
     CDS             complement(25423..25647)
                     /gene="pspB"
                     /locus_tag="RHX79_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspB"
                     /protein_id="HDV2196005.1"
                     /translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLA
                     QLADEAKRMRERIQALESILDAEHPNWRDR"
     gene            complement(25701..26369)
                     /gene="pspA"
                     /locus_tag="RHX79_000801"
     CDS             complement(25701..26369)
                     /gene="pspA"
                     /locus_tag="RHX79_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspA"
                     /protein_id="HDV2196006.1"
                     /translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR
                     STSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIK
                     SLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGK
                     LDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMK
                     QDNQ"
     gene            26536..27513
                     /gene="pspF"
                     /locus_tag="RHX79_000802"
     CDS             26536..27513
                     /gene="pspF"
                     /locus_tag="RHX79_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HDV2196007.1"
                     /translation="MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKEL
                     IASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGG
                     TLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGT
                     FRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLL
                     NYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLP
                     LDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI"
     gene            complement(27633..28898)
                     /gene="puuE"
                     /locus_tag="RHX79_000803"
     CDS             complement(27633..28898)
                     /gene="puuE"
                     /locus_tag="RHX79_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate transaminase"
                     /protein_id="HDV2196008.1"
                     /translation="MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYID
                     FAAGIAVLNTGHRHPELVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQA
                     KTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGP
                     FPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPK
                     ELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYVDKPDLMTMAKSLAGGMPLS
                     GVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTL
                     IDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYG
                     NVIRFLYPLTIPDAQFDAAMKILQDALSD"
     gene            complement(28936..30216)
                     /gene="puuB"
                     /locus_tag="RHX79_000804"
     CDS             complement(28936..30216)
                     /gene="puuB"
                     /locus_tag="RHX79_000804"
                     /EC_number="1.4.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylputrescine oxidase"
                     /protein_id="HDV2196009.1"
                     /translation="MTEHTSSYYAASANKYAPFDTLNESISCDVCVVGGGYTGLSSAL
                     HLAEAGFDVVVLEASRIGFGASGRNGGQLVNSYSRDIDVIEKSYGMDTARMLGSMMFE
                     GGEIIRERIKRYQIDCDYRPGGLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAI
                     RREVASDRYTGALLDHSGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVV
                     RTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQVITTERLSEDLARSLIPKNY
                     CVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDY
                     RWTGNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAF
                     ANLPHYPFPGGRTLRVPFTAMGAAYYSLRDRLGV"
     gene            complement(30218..31705)
                     /gene="puuC"
                     /locus_tag="RHX79_000805"
     CDS             complement(30218..31705)
                     /gene="puuC"
                     /locus_tag="RHX79_000805"
                     /EC_number="1.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707209.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase PuuC"
                     /protein_id="HDV2196010.1"
                     /translation="MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVT
                     QAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELA
                     LLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV
                     IAAIVPWNFPLLLTCWKLGPALAAGNSVVLKPSEKSPLSAIRLAGLAKEAGLPDGVLN
                     VVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGESNMKRVWLEAGGKSANIV
                     FADCPDLQKAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHP
                     LDPATTMGTLIDSAHADSVHSFIREGESKGQLLLDGRNAELAAAIGPTIFVDVDPNAS
                     LSREEIFGPVLVVTRFTSEDQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVF
                     VNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLEA"
     gene            complement(31980..32537)
                     /gene="puuR"
                     /locus_tag="RHX79_000806"
     CDS             complement(31980..32537)
                     /gene="puuR"
                     /locus_tag="RHX79_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001464354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator PuuR"
                     /protein_id="HDV2196011.1"
                     /translation="MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDK
                     VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN
                     PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINT
                     GIPHSFSNTSAGICRIISAHTPTTF"
     gene            complement(32564..33328)
                     /gene="puuD"
                     /locus_tag="RHX79_000807"
     CDS             complement(32564..33328)
                     /gene="puuD"
                     /locus_tag="RHX79_000807"
                     /EC_number="3.5.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415814.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase"
                     /protein_id="HDV2196012.1"
                     /translation="MENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIA
                     LPHALAEPSLLEQLLPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMAIINA
                     ALERRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQ
                     VVEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALG
                     VQWHPEWNSSEYALSRILFEGFITACQHHIAEKQRL"
     gene            33540..34958
                     /gene="puuA"
                     /locus_tag="RHX79_000808"
     CDS             33540..34958
                     /gene="puuA"
                     /locus_tag="RHX79_000808"
                     /EC_number="6.3.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-putrescine ligase"
                     /protein_id="HDV2196013.1"
                     /translation="METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLL
                     TDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVP
                     VLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL
                     EFYLLDRQRDAEGYLQPPCAPGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIP
                     ADGAVAEASPGQFEINLYHTDNVLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEH
                     AGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRR
                     FQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILH
                     GLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKN
                     DELLQFERLITETEIEWMLKNA"
     gene            35107..35271
                     /locus_tag="RHX79_000809"
     CDS             35107..35271
                     /locus_tag="RHX79_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196014.1"
                     /translation="MPMIKSPHGEGGCVCAPPATDWTPPPLLPLLNRFDFRLTRPQTL
                     LRRGGSNYGY"
     gene            35261..36646
                     /gene="puuP"
                     /locus_tag="RHX79_000810"
     CDS             35261..36646
                     /gene="puuP"
                     /locus_tag="RHX79_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PuuP"
                     /protein_id="HDV2196015.1"
                     /translation="MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTF
                     GIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMV
                     GWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFN
                     TLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSF
                     LGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAA
                     LPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPERVFGYVH
                     PKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMN
                     KSWKDHFHYLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPL
                     YDGDRTPVSET"
     gene            36780..37025
                     /locus_tag="RHX79_000811"
     CDS             36780..37025
                     /locus_tag="RHX79_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmjA family protein"
                     /protein_id="HDV2196016.1"
                     /translation="MNHDIPLKYFDIADEYATECAEPVADAERTPLAHYFQLLLTRLM
                     NNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE"
     gene            37337..38980
                     /gene="sapA"
                     /locus_tag="RHX79_000812"
     CDS             37337..38980
                     /gene="sapA"
                     /locus_tag="RHX79_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein SapA"
                     /protein_id="HDV2196017.1"
                     /translation="MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQV
                     NTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRR
                     DVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSV
                     RKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPY
                     QLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS
                     QLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYG
                     TAETAASILPRASWAYDNEAKITEYNPAKSREQLKSLGLENLTLKLWVPTRSQAWNPS
                     PLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRP
                     LLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLA
                     SSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP"
     gene            38977..39942
                     /gene="sapB"
                     /locus_tag="RHX79_000813"
     CDS             38977..39942
                     /gene="sapB"
                     /locus_tag="RHX79_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapB"
                     /protein_id="HDV2196018.1"
                     /translation="MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAW
                     VFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGIT
                     RHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFA
                     LIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAA
                     ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAI
                     RQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR"
     gene            39929..40819
                     /gene="sapC"
                     /locus_tag="RHX79_000814"
     CDS             39929..40819
                     /gene="sapC"
                     /locus_tag="RHX79_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapC"
                     /protein_id="HDV2196019.1"
                     /translation="MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCI
                     FGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA
                     FVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSH
                     AMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVT
                     EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMIS
                     VLLVNLLGDGVRRAIIAGVE"
     gene            40819..41811
                     /gene="sapD"
                     /locus_tag="RHX79_000815"
     CDS             40819..41811
                     /gene="sapD"
                     /locus_tag="RHX79_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapD"
                     /protein_id="HDV2196020.1"
                     /translation="MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGS
                     GKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCL
                     DPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELT
                     EGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
                     LQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLN
                     TLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE"
     gene            41813..42619
                     /gene="sapF"
                     /locus_tag="RHX79_000816"
     CDS             41813..42619
                     /gene="sapF"
                     /locus_tag="RHX79_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapF"
                     /protein_id="HDV2196021.1"
                     /translation="MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLA
                     IIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLN
                     PRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLG
                     LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS
                     DQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR"
     gene            42687..43040
                     /locus_tag="RHX79_000817"
     CDS             42687..43040
                     /locus_tag="RHX79_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HDV2196022.1"
                     /translation="MMDKIKSNARDLRRNLTLQERKLWRYLRSRRFGDFKFRRQHPVG
                     SYILDFACCSARVVVELDGGQHELAVAYDTRRTSWLESQGWTVLRFWHNEIDCNEEAV
                     LEIILQELNRRSPSP"
     gene            43408..44196
                     /gene="fabI"
                     /locus_tag="RHX79_000818"
     CDS             43408..44196
                     /gene="fabI"
                     /locus_tag="RHX79_000818"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HDV2196023.1"
                     /translation="MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL
                     KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG
                     DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
                     LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR
                     TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK"
     gene            44341..45468
                     /locus_tag="RHX79_000819"
     CDS             44341..45468
                     /locus_tag="RHX79_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309887.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMD domain-containing protein"
                     /protein_id="HDV2196024.1"
                     /translation="MEQRHITGKSHWYHETQSSTAEYDVLPLVPEAAKVSDPFLLDVI
                     LDEETLAPFLSWLVPARVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLC
                     NYYSARLTPLPGPDSSRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAGDC
                     VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESIRWRSSYEV
                     EKLPEEYTKSSTAELCQLAETLSLHPISLSLLERLLNSTRVNTQPDNKLAALLCARIN
                     GSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVEHATVQAIQWLTRAPDRFS
                     AAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY"
     gene            45536..47470
                     /gene="rnb"
                     /locus_tag="RHX79_000820"
     CDS             45536..47470
                     /gene="rnb"
                     /locus_tag="RHX79_000820"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HDV2196025.1"
                     /translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY
                     FIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPD
                     HPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVP
                     WWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALP
                     DDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN
                     EVRPVLACRMTLSADGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEAIA
                     EQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEA
                     MIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFC
                     KLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINH
                     RLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDKAGTDTRFAA
                     EIVDISRGGMRVRLVDNGAIAFIPAPFLHAMRDELVCSQENGTVQIKGETVYKVTDVI
                     DVTIAEVRMETRSIIARPVA"
     gene            complement(47548..47652)
                     /locus_tag="RHX79_000821"
     CDS             complement(47548..47652)
                     /locus_tag="RHX79_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196026.1"
                     /translation="MTYMKLTAAKRIVFFIYLFVIQFWKNASFQTKVS"
     gene            47706..49691
                     /gene="pdeR"
                     /locus_tag="RHX79_000822"
     CDS             47706..49691
                     /gene="pdeR"
                     /locus_tag="RHX79_000822"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HDV2196027.1"
                     /translation="MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTL
                     QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAV
                     ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF
                     MSRREAAASRRNNRVFFRSGNAYEVELWIPTRKGQRLFLFRNKFVHSGSGKNEIFLIC
                     SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDN
                     FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA
                     SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF
                     CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPER
                     GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT
                     IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY
                     SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE
                     DAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA"
     gene            49838..50011
                     /locus_tag="RHX79_000823"
     CDS             49838..50011
                     /locus_tag="RHX79_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196028.1"
                     /translation="MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVA
                     ESTPDIPKAPWEI"
     gene            50101..50850
                     /locus_tag="RHX79_000824"
     CDS             50101..50850
                     /locus_tag="RHX79_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDV2196029.1"
                     /translation="MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKL
                     SYLRRAHGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLA
                     RTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHF
                     SKAFIGIDGWQPEIGFTGRDMMRTDVVNAVLEKECEAIVLTDSSKFGAVHSYSIGPVE
                     RFNRVITDSKIRASDLMHLEHSKLTVHVVDI"
BASE COUNT        12139 a        13430 c        12770 g        12586 t
ORIGIN      
        1 atcagcaagt agtgctaaac agcaccttta tacttcagcc tatctataaa taatgagaat
       61 gccgagccag catgtcgacg gtgtggatag tacaggtgat aaccgggtaa atctggtgtg
      121 aatttatcca aaacacgtat cagttttttt tctttaatag cccgctcaac ctgatcataa
      181 ggtagatacg ccaatccatg cccatcaatt gcagcatcaa tgatcaggtc tatcgtattc
      241 agtaaaagct gaccttccat gcgaacacga acttcacgtc caccgcgtat taatctccag
      301 cgatttgctg tacccgatgt gggaagatac aaattaattg cctgatgatc tattaattgt
      361 gacactgacg ttggaacact tcggcgagaa aaataatccg gtgagccaac aatagccatt
      421 ggtatatctg gcccgattcg aatggcgatc atatctttat ccatctcccc acccagacgg
      481 acgcctgcat caaaacgttc agaaacgaca tcggtcaaac cataatcaat ggtgagctga
      541 atatcaattt caggatgcga tttcaggaat gtgcgcattg ctggtaacaa tatcgttttt
      601 gctgcatgtt ctacagtagt aatacgtatt gtcccggatg ggcggttctg cagctcgctc
      661 agggatgcca gggctgaatc tatgtcatgc aacatagggc caagaacaga caaaagatgc
      721 tcgcccgctt cagttggaac aacgctgcgc gtggttcgcg tcagaagccg caatcccaat
      781 cgttcttcta tacgacgcac tatctggctt aaagctgact gcgccatgct caggcgggct
      841 gctgcacgag tgaagctacg ctcctctgca acgacgacaa acgccatcag atcagcgatt
      901 tcttcacgct tcattcagta tctccatgca atctattaat catttaaatg ataggtctaa
      961 tcatgatttt gggtctaatc aacttaatga tcaatatcta tagtgatatc accaaccgtt
     1021 aaaacgaacc gacaactcca tgaggaacgg aatgatgaat aataaagtca gcttcactaa
     1081 cagcaataat ccaaccatct ctttgtctgc agtgatctat ttccctccaa aatttgatga
     1141 aacccgtcag tatcaggcaa ttgtggtatc tcacccaggt gggggcgtta aagaacaaac
     1201 ggccggaacc tatgccaaaa aactggcgga aaagggattt gtcactattg cttatgacgc
     1261 atcttatcaa ggtgaaagtg gcggcgagcc gcgtcagtta gaaaacccat acattcgtac
     1321 tgaagacatc agtgccgtga ttgattacct gacaacgctt tcttatgtcg acaatacccg
     1381 aattggtgcg atgggaattt gtgccggtgc aggatataca gccaatgctg caattcagga
     1441 tcgccgcatc aaggccatcg gtaccgttag tgcggtcaat attggttcga tgttccgtaa
     1501 tggttgggaa aacaatgtga aatctattga tgccctgcca tacgttgaag cgggttcaaa
     1561 cgcccgaacc agcgatatta gcagcggaga atatgccgtt atgccactgg caccaatgaa
     1621 ggagtccgat gcgccgaacg aagaactgcg tcaggcctgg gagtattacc acacccctcg
     1681 cgcgcagtat ccaacagcac cgggttacgc tactttgcgc agccttaacc agattattac
     1741 ctatgatgct taccatatgg cggaagtgta cctgactcag ccgatgcaga ttgtggcggg
     1801 cagccaggca gggagcaaat ggatgagtga cgacctgtac gatcgggcat caagccagga
     1861 taaacgctat cacattgttg aaggcgcaaa ccatatggat ctttatgacg gcaaagccta
     1921 tgtggctgaa gcaatttcag tattagctcc gttctttgag gaaactctgt aatgaaacat
     1981 attcaaatcc gcaatagtga tatggcctgg catattgctg ccaatattca gtttccacca
     2041 aattttgatg agtcaaaaca gtatccggcg attatcagcg tccatccttt tggcagttgt
     2101 aaggagcaga cgtctggcaa tatctatggc aaagcattgg ctgaaaaagg ctatctcgtt
     2161 ctcgcttatg acgccagttt ccagggagaa tctggtgggg agcctcgctg gatagaagat
     2221 ccgacacagc gcgtagagga tattagccgt gttatcgatt atgcagtaac tctgccatat
     2281 gttaatgctg aacgtattgg cgtgctggga gtgtgtgggg gtggtggcta tgccattaat
     2341 gccgcgctga cagaaaaacg aattaaagca gtagtgagta ttacgggtgt taatatcggg
     2401 cgtctttttc gggaaggttt cagcaattac gatccgattg gcgcattgaa tgcaatggcg
     2461 tcgcaacgaa ccaaagaggc tcgtggtgga gaattacaga tcaacgaatt acttcccgcc
     2521 agcctggatg cagcaaaagc ccatggactg accgaacgcg atgtttatga agcaactgac
     2581 tactataaaa caccacgcgg gcaacaaccg ggaggtgcga caaaaatgtt gttctcacat
     2641 gcacagaaaa cgctggcctg ggatgccttc gcatttactg aagtgttact gactcagccg
     2701 gtgatggtag tagttggtga aaaagtcggt gccttcggtg cttatcgtga tggactggaa
     2761 gtctatggcc gggcgatggt ttcgcaggat cgtcagttag tttcattacc cgatttctca
     2821 cattatgaac tgtatgacaa accggaagca gttcaggagg cgctggaaaa agttattcct
     2881 tttttcaaca cccatctggg ataagtttca tgagaaatat tatgaaaaat gtactgattc
     2941 ttggtgctgg cggtcagata gcccgccatg tgattaatca actggcagat aaacaaacca
     3001 ttaaacaaac tttatttgcc cgtcagccag caaaaatcca caaaccctat ccaactaata
     3061 gcaagattat tatgggagat gtactgaatc atgcagcact gaagcaggcc atgcagggac
     3121 aggacgttgt gtatgccaac cttacggggg aagatttaga tattcaggca aattcagtga
     3181 tcgctgcgat gaaagcctgt gatgttaaac gtctgatctt tgttctttcc ctcggtattt
     3241 atgatgaagt tccaggaaaa tttggcgaat ggaataatgc agttattggt gagcccctaa
     3301 aaccattccg cagggctgcg gatgcaattg aggcttctgg actggaatat acaattcttc
     3361 gccctgcctg gctgactgat gaagatatta ttgattatga gcttacctca cgcaatgaac
     3421 cattcaaagg tacgatcgta tcacgtaaga gtgtcgcagc attaatcaca gatatcatcg
     3481 ataaacctga gaaacacatt ggtgagaata taggcatcaa tcaacctggt actgatggtg
     3541 ataagccatt cttcatgtaa atcaattaca taactaccat cgtactgtac tatgtgcagt
     3601 acgatttatt aaacttatta aggtgaactg atcaatccga tgcgattaac atgtgtagaa
     3661 ccagtaagaa taaaatacgc catgtatata acattacgac aattctaata tctgcacatc
     3721 aatgaaaatg caaacaactt ccggcaaaaa agtgatacaa gatcgatgac atagcgttga
     3781 agaaaaggat ttgataatcc gcaaaatttg cacaacactg cctgtaatac ttcctgaacc
     3841 agagacgatc atgaccgtaa cccgcccacg cgccgaacgc ggcgcatttc cgcccggaac
     3901 agaacattac ggacgttcat tattgggcgc gccgttaatc tggtttcctg cccctgcagc
     3961 cagtcgcgaa agtggtttga ttctggctgg cactcacggt gatgaaaact cttcggtcgt
     4021 cacgctctcc tgtgctctgc ggactttgac accttctttg cgccgccatc atgtggtgct
     4081 gtgtgtgaat cctgacggct gccagttagg gttacgggcc aatgctaatg gtgtggattt
     4141 aaacagaaac tttccggcgg cgaactggaa ggaaggtgaa acggtttatc gctggaacag
     4201 cgccgctgaa gaacgtgatg tcgtattact gacaggtgac aaacctggct ccgaacctga
     4261 aacccaggcg ctgtgccagc ttatacaccg cattcaacct gcctgggtgg tctcattcca
     4321 cgatccactg gcttgtattg aagatcccag acacagcgaa ttaggcgaat ggctgtccca
     4381 ggcgtttgaa ttgcctctgg taaccagcgt cggctatgaa acgcctggct ctttcggcag
     4441 ttggtgtgca gatctcaact tgcattgcat caccgcagag tttccgccca tctcctccga
     4501 cgaagccagc gaaaaatatc tctttgcgat ggcaaacttg ctgcgctggc atcctaaaga
     4561 tgcaattcgc ccgtcgtgaa ctgaagcgcc ggttccacat ctaccgccag ccaggtcggt
     4621 ccgtcaagat cggcgaaact gacctgcggc accagcggta aagcggcgct aatggcacga
     4681 gaggtacaca acatgcagcc cagcatcaga cgaaaacctt gtgcacgtgc ttcagtcgcc
     4741 agcgccagcg cttccgtcag acccccggtt ttatcgagct taatgttaac catctcatag
     4801 cgccctttca gcgccttcag attgctacga gtatgacaac tttcatcagc acaaatcggc
     4861 aacggatgaa taaaattctc cagtgccgca tcgtcctgcg caggaagcgg ttgttcaagc
     4921 atcgcaacgc ctaaatccgc caatagctgg caacgcgccg ccaacccttc tgcacgccag
     4981 gattcatttg catcaacgat cagcgtggca tcgggcacag cggtgcgaat tgccaccatc
     5041 cgctcactaa taagatggtt atccagcttc actttcagta atttcgcgcc tgcctgccag
     5101 agtgttgatg cactattggc catctgatca ggcgtaccga tgactaccgt ctgtgcagtg
     5161 ataactgtct cgggaagcgt tatgccgatc aaatcagcca gcgattgctg ctgttttcgc
     5221 gccgccagat cccacaatgc acaatccagc gcattacgtg ctgcgccggc agggagaatt
     5281 ttttgcaact cctcccgtgt cagccctttc tctaattgcg gtacgacgct cataatttgc
     5341 gccattaccg aggcatcact ttccccataa cgcggatacg gcgtgcattc gccggtgcct
     5401 ttaataccct cttcttccag ttcaaccacc accacgcgcg cttcactgcg acttccccgg
     5461 gcaatcacaa acggggtatg taagggccag gcttcctcaa ataccttaac ggttctcatc
     5521 tttactcctt gttgtcgcgg tggtctgcgg attaagcgca aatagcgttt gctgtgttat
     5581 tgacagttag cataaactag gtgtgacgtt aactatatgt aaacaggaaa gataatcatg
     5641 tcacaaaccg ttcatttcca gggcaacccg gttacagtcg ccaattccat cccgcaggcg
     5701 ggtagcaaag cgcagacttt tactctcgtg gcaaaagatc tgtctgacgt caccctcggt
     5761 cagtttgcgg gtaaacgcaa agtgctgaac attttcccga gtattgatac cggtgtttgc
     5821 gccgcatcag tacgtaagtt taaccaactg gcaaccgaga tcgacaacac cgttgtgctg
     5881 tgtatttctg ccgatctgcc gttcgcccag tctcgtttct gcggcgcaga aggtctgaac
     5941 aacgttatca ccctctccac tttccgtaac gctgaattcc tgcaagccta cggtgtggca
     6001 attgctgatg gcccactgaa aggtctggca gcgcgtgccg ttgtggttat tgatgaaaat
     6061 gacaatgtga ttttcagcca gctggtggat gaaatcacca ccgagccgga ttacgaagca
     6121 gctctggcgg tactgaaagc ataagttaat atgcctgatg gtgttgcacc atcaggcata
     6181 ttcgcgctta ctcttcgttc ttcttctggc ttaagccata ttcccgcaac ttattggcaa
     6241 tcgcggtatg tgaaacgccg agacgttttg ccagtttgcg cgtgctggga taattgcgat
     6301 aaagctgggt taataccgag cgttcaaaac ggctggtgat ttcatccagc gaaccttcca
     6361 tcgcatcttc gcccacggct accgttgcgg cgtcataatc cggcaacaaa atatcctgtg
     6421 gacgcagctc ataaccgtcc agttgtgtca gtgcgcgata gatagcgttc tttaactgcc
     6481 gcacatttcc cggccacgca tatcgcgtaa gtacagtatt caggtcagcg gccagtttcg
     6541 gacgcggcac gccctgctcg tcggcaaagc gggcgacgaa cagctcagtt aacggcatga
     6601 tgtcctgcgg acagtcacgt agcggcggca gattgagcgt caacacgttc agacgataat
     6661 agagatcttc acggaacatg cctttttgca ccagttcgac cagattcttc tgcgtagcgc
     6721 aaatcacccg cacatcgaca tgcacctcat ggtcttcgcc aacccgacgg aaagtgccat
     6781 cattaaggaa acgcagtaat ttcgcctgca tccgtggtga catttcccct atttcatcca
     6841 acagcaccga accaccgttc gcctgctcaa agaatccttt cttcccttcc ggagcatgac
     6901 caaacagttc actctcgacc gcatcttccg gtatagacgc acagttcagc gccaggtaag
     6961 gtttgcccgc tctggggctt gcctgatggc aggcgtaggc aaagagatct ttacctgtac
     7021 ctgtgtcacc cgtaatcagc agcggcgcgc ttagcatcgc cagtttctgc gcctgttcga
     7081 caacatgctt cattttcggg ctgacggcga caatttgact gaaggcgctg acgtcctggg
     7141 cggcgacatt ttgcaactgg cggcccatac gaatcgttga tcgcaacatc accaccgcac
     7201 cggtcaggac gtgttgatca ttttcatcct gaagataaac aggcgtaatc tccatcagga
     7261 aattctgccc attaataacg acatgctcgt tatgggaatc ttgcggttcg ctttccagcc
     7321 aacgtaaaaa attaaagccg ttaatcaatt gtgcggcggt atggttgcgc aggcgatcca
     7381 atttttgcgc aaaaagctga cagctcgccg ggttcgccat atccactttg cttttcatat
     7441 cgacagagag cacaggttcg ggcaacgcct ccagtaacgc gctcaacgcc agatgctcac
     7501 gttcggaagg catccacggg acagtacgca catcggtaac acctgcaata cggcgtattt
     7561 cggccatcag actgctgaaa ctctcaaact ccagttcagc aaaattgagg tagattcgcc
     7621 caatgggatc aatctcaata ccgcgtaaat caatgcctct tagcacgagt agatcgagta
     7681 attcgcgggt cagaccgagt cggtcttcac aaaagacttc cagacgcatg ggaaccttca
     7741 cctgaaaaaa gaacaattaa tatgatgata tgacactatt tggatagcag gaaggtttct
     7801 gtcaacaatc attgacacaa agacggaaaa acgggcactt cggcgtaaag atatccggtc
     7861 agcacccgat attgcattat ttttcgctgg gcgttttgcc tttttgcagc gtttctttca
     7921 cctgaccgat aagctgacga cggaaatccc cgaggcgagg tttgtcatcg tcaatccacg
     7981 gcagcgggcg gcaaagctcc atagctttaa tcccgagtcg tgccgtcaga agtccagcac
     8041 caattccctg agctgcgcgg gtagacaaac gagcagcgag atcttgcgac atccagtcca
     8101 tccccacttc gcgcaccagt tcgctggctc cggcaaaagc gatattcagc aataccagct
     8161 taaacagacg caaacggctg taatacccta gttcaatgcc atacagcgtg gcgatgcgat
     8221 taattaaacg cagattgcgc caggcgataa acgccatatc gaccaacgcc agcgggctga
     8281 ccgcaatcat caacgttgat tccgccgccg aacggctgat ttcgcgccgc gcctgggcat
     8341 ctaaaactgg ctggaccaaa tgcgcataca aactgaccac ttcacggtcg ttttgcgttt
     8401 catggattga ggcataccag cgttgcagcg ctggatgaga ctgatcaata cccgcctgct
     8461 gcgccagttt ttcgcaaaat gcgcggcctt tgcccgtgcc gtggctgtgc aacaaatcgc
     8521 gcgcttcgtc gcgttcatgg gcgcgctgtc gcaagcgcca taagcgccgc cactctgtta
     8581 ccacagaacc tacgccagcg ccgataatca atgccccagc ggcacatcca cccagcgcca
     8641 cccagtcctg agtttgccag gcattcattg tccactgtac accctgcccg acaacgcttg
     8701 cgccaaacag agccagcccg cccatcacca ttttgcgcca caggctgcgt ttcggacgta
     8761 acgctgcatc cattaccgct tcaacttgcc cctcttcttc aggcgcttca tcgagcgtgg
     8821 ccggggcaaa attttgcgcc tgattttcgt caaaggtctg ctgcgccctg aattttggat
     8881 tctgatcgac ctccagcgga ccgtcgaaat caatacgtgg ttttaacggt tcggtcatcg
     8941 caatttatct cctattaaaa attcaagcgc ggcatcaaga cgaatatgcg gcagcggttt
     9001 gtcgacatcc atcacctgcg ggcgaaacgc ttcaaactgg aacccttgct tgtcccagaa
     9061 cgcctgaccg ggcaaacgcg caggaacttc accgggataa acggtgagtg gcgcaccatc
     9121 gctgagccgg ttaccgcgca atgccggaat tttctcgccg ttgacgtcaa taatgccgct
     9181 ggtggtcgcc tgcaccgagg ccagccccag gcaatccata ctaatccctt caaacgccgc
     9241 attttgccag gcatcctgaa tcagttgttg cagtaatgaa accatattgg cgtgctgatc
     9301 gatggtcaca tggtccgctt tagtggcagc aaacaatagc ttatcgataa ccggcgaaaa
     9361 caaacgccgg aacaaggtac gctgcccgta gtggaaactt tgcatcagct gcgtcagtgc
     9421 cagacgcata tcattaaatg cctgtggccc actgttgaga ggttgcaggc aatcaaccag
     9481 cacaatctgg cggtcaaagc gcagaaaatg attcttatag aaccccttca ccaccttctc
     9541 gcagtaataa ttaaaccgct cgcgcagcat tccggcattg gtgtgcttat cggcctgcgc
     9601 cagtttggac tcgccccagg catcgacatc cggccacggg aagaattgca gcgcgggcgc
     9661 acctgccata tctcccggca agacaaagcg cccaggctga ataaagtgca gcccctgctg
     9721 tttacagtgg tggagataat cggtccacgc ggcggcaatg tctgccagcc ggttttcgtc
     9781 ggcaggcgct agcgggtcca gcccttcgca catcattcgc catttgaccg accattcgcc
     9841 gcgctgacca ttgagtaagc ccgtcatctg gcgtgaccag cttaaatagt cctgcgccag
     9901 catcggcagg tcgagcaacc attcgccggg ataatccaca atctccagat acagcgtgga
     9961 ggtgtccttg aagtggcgta gcagcgaatc gttcgattta aaacgtagcg ccaggcggat
    10021 ttcactgacg ccgcgcgttg gcgtcggcca ggcgggagga tcgccatata actgcgccag
    10081 tccttcatca tatgtgaagc gcggaatgcc aaagtcacgc tgaggaatgc gttttacgcc
    10141 cagcaggcgc tcttcacgca ccgcgcttaa cagcggcaag cgtgctccgg cgtgaatatt
    10201 gagcaactga ttgaccatcg cagtgataaa cgctgttttg ccgctgcggc ttagtccggt
    10261 tacggcgagg cgcagatgtc tgtcgacacc ccgattcacc agcgcattaa gttcattttt
    10321 aagtcgcttc attgctgtcc tgtgctgctc tgaagaccag aaaaaaatca ttcgtaagga
    10381 tatgaatgtg ggggccaggc cattgattat caactgcccg tgttgtcatc gacgggcgaa
    10441 ctccataaga tgtgcagcat tcacgttcgg acggagttcc tgacctatgt cccctactat
    10501 ttatgatatt gccagggttg caggcgtatc aaaatccacc gtatcacgcg tgctgaataa
    10561 gcaaactaat atctccccgg aagcgcgcga aaaagtgtta cgggccattg aagaattaca
    10621 gtatcagcca aacaagctag cccgcgcgct gacctcttcg ggttttgatg ccattatggt
    10681 gatttctacc cgttcgacca aaactacggc gggtaatccg tttttctctg aagttttgca
    10741 tgccatcacc gccaaagctg aagaggaagg tttcgacgtg atattgcaga cgtcgcacaa
    10801 tccggcagaa gacttacaaa aatgtgaaag caaaattaag cagaaaatga ttaaaggcat
    10861 tattatgctc agttcgccag cggatgagtc attttttgcc caactcgata aatacgatat
    10921 tccggtggtg gtaattggca aagttgaagg tcaatatgcc catgtttatt ctgtcgatac
    10981 cgataatttt ggcgacagca ttgcgttgac cgatgcatta attgaaagtg ggcatcaaaa
    11041 tattgcctgc ctgcatgctc cgcttgatgt ccatgtttcg gttgatcgcg ttaatggcta
    11101 taagcaaagt ctgtccgcgc ataatattgc agtgcgtgat aaatggattg ttgacggcgg
    11161 ttatacccat gaaacagcac tgcaagcagc acggcaatta ttaagtcagt caccgttgcc
    11221 tgaggcagtg tttgccactg acagcctgaa attaatgagc atttatcgtg cggcggcaga
    11281 gaaaaatatt gctattccgc agcagttagc ggtggtgggt tatagtaatg aaacgctgtc
    11341 gtttatttta acgcctgcac caggcggcat cgatgttccg acgcaggagt taggtcaaca
    11401 aagctgcgag ttattattcc gcttaatttc tggaaaaccg tcaccacaga atattaccgt
    11461 tgccacgcat atgacgctga aataaatacc agctaccttg cctgaatgcc ggatgcgatg
    11521 ctagcgcatc ttatccggcc tacatttata gatcggataa agtactcgcg ccgcatccgg
    11581 caatttagcc cattatcaga acgagtaatt tacgccgaca cctgcataat ggaatttatc
    11641 gctgtcgcct tcgtcgtgat cctgccactc aaacgcgtat tccagcgaaa cggaaagacc
    11701 attctggaaa tcataaccgt aaaataaacc cacacggtta aaatcatggc cttcacgttc
    11761 gatatcatcc tgccagtccc agttactcca gcgatccagc ccaatgcgcg tatacggcgt
    11821 caccgagtgg ttgccgagcg tcagcggcaa ataggcgcga atttcttgcg tagaaaactc
    11881 accgttattg cggctgtcgt ccatattaaa gccgcgctcg agataatagt tcactcgcaa
    11941 ggcaaccgtt tcgttgaagg tatattgcag gcctgtttcc gtttcgactc gggtatcagc
    12001 gtaaccggtc gtgttcagat cgttggcaaa tttatacatc gacaaccaac cgttgaaacg
    12061 taaatcgtca gtcagtttca catcccagtc tggcgcgatt ttccagcgct gcatattcgc
    12121 cgtgtcttta cccggttcat caacgtagtg ataaccataa ttacggaaac cgccggtcag
    12181 gccgaaactg aaatcatcgt tttcgaggaa ctgataatgc acctccagct ccgggcgatc
    12241 aaaccacgtt ccacgtttac ccgcgctata atctaccggc ccttcctgat aataggccag
    12301 agcaattctc cacggcccgt tggcggcatt aaaatagact gaaggctccg ccagcccatc
    12361 catatcttcg ccataaccct cgacgttttc tatttcgtac atcgcgccga tattaaagtg
    12421 ccagtcgttc ctttcctcgg cctgtgcgca ggccattccc gcacacatca ccagtgcggt
    12481 acagggtaat aactttttca ttattgttcc ttgtattatt ctgggggaat gccttccccc
    12541 tgtatttagc gaattgctat ttccgtttct gcatcaaaga aatgacattt cgtcatatca
    12601 aaatgaatag tgatgttttc tcctgcatga taatcattta acgcaccagc acggaccact
    12661 aactcgtgcc ccccaaccgt ggtgtagagc ataaattccg caccggttaa ttctgccacg
    12721 ctaattttgg cggaaatgtt attttcctct tgcgcgtccg gatgaatatc ttccggacgt
    12781 attcccatca cgatgggctt atgcaaactt ccctgtgttt tcagaaccgc taatttctct
    12841 tcgggaatgg ttaatttaag cgtttccgta acgaatttat cgccatcgat cgtgccacga
    12901 ataaaattca tcgccggtga tccaataaat ccggcaacaa acatattcgc tggttggtta
    12961 taaaccgttt tcggcgcacc aacttgctga acaatcccat ccttcataat cacaatccgc
    13021 gtcgccatgg tcatcgcttc ggtctgatcg tgggtcacgt agatcatggt ggtattcagc
    13081 ttctggtgta gcttgctgat ctctgcgcgc atttgcacgc gcagcttggc atcaaggtta
    13141 gagagcggtt catccattaa aaacacgccc gcttcgcgca caatcgcccg cccgagcgcc
    13201 acacgctggc gttgcccgcc ggaaagcgcg cccggcttgc gtttcaggta ctcacgcagg
    13261 ccgagaattt gcgccgccca gttcacccgc tcatcaatca cctctttggc gattttttgc
    13321 atcttcaggc caaacgccat gttgtcgtaa accgtcatat gcggatacaa cgcgtagttc
    13381 tggaacacca tcgctatatt gcgtgctttg gctggaacgt cattcattcg tttgccgtcg
    13441 atcaacagat cgccgccgct gatctcctca agcccggcaa tcatgcgcag ggtggtcgac
    13501 ttaccgcagc ccgacgggcc gacaaacacg atgaactctt tatcggcaat ttccaggttg
    13561 aagtccttca ccacatgcac ctggttatcg tagatttttt gaatatgttg taacgaaagc
    13621 tgagccatgt tgattccttt gctatacgtt ttgccagaag gccgataacc gcgaccaggt
    13681 cagagagtcc gttgaaggca acagtaattg cgccccggtt aagcccgcgc cgatccccac
    13741 cgagcgcata ccgctggcgt taatggcgtc aatgcccgcc tgcgcatctt caatgccgat
    13801 acatgcctgc ggcggcacgc ccagcccggc acaggcagcg agaaagattt ccggatccgg
    13861 tttcgagttt ttaagttggg aagcatccgc gcagaaggtg aaaaactcgc gcagctccag
    13921 cgccgctaaa atcgtcggcg cattcaggga gacagaagcc agcccaaccg ggatctgctg
    13981 tgcacggaga tctgccagca aagagcgaat gccgggtaga acagcgctga ccgtcaactc
    14041 gcgcagtgag tggacataga gcagattttt gcgatacgcc agttgcgccc tctcctgcga
    14101 gttaaagtcg ccctctttgc ccccgtgttg cagaatgcgc cgcagagact catcgcggct
    14161 gatccctttt agggattcgt taaactgcgc atcaatgctg atgccaattt cagcggcaat
    14221 ctgctgccac gcctggaaat gcagatgcgc ggtatcggtg attacaccat ccagatcgaa
    14281 aattacccct tgcagtttca ttcatcctcc tgatgtgtgg tagcggtccc attgaagggc
    14341 aaaataaaat cacccaaaca gaaaacagat tcttcagcca cggatataag ctgaccgttc
    14401 aaacgcagtg aaacgggcgc agaagttcga atcgcaatac gctgcgcgtc aagagtgacc
    14461 tgtaattcgc agccctgcca gaacagaggg aaagacaact gttgccactg ctcaggtaac
    14521 gccggattga gatgcaattc accgtcacgc acgctcaccc cggcaaaacc ctgaatcgcc
    14581 cccagccaga tagcgccagt tgcggcagca tggataccat catcacaact atgcggatca
    14641 gcaccaagat cgatttcagt cccctcgcgc cagaactgat aactttgggt cagcaggcca
    14701 cagcgtgcgg caacaatgcc gtggattgct ttacttaatg acgagtcgtg aatagtgcgc
    14761 ggttcataaa attgcagatt ggcaagacac gatgccgctg agaactgctc cggcagcatg
    14821 taattgagca tcaccacatc agcttgtttg aggatttgca tctcgttcac ttctgcgcgt
    14881 gaataatcca gcagaatggt ttgcttcccc gccgccgctt tgtatttcgc cagattaatc
    14941 gccggcttag ccataaacga atcatcctgc ggcaaaacgc cgtcgggctg aatttctggc
    15001 agccgcagtt ctttaaggaa catttcggcg cgatggataa acgcatcgtc gctacagcca
    15061 aactggcggg caatactcag cgcctgctgg acgttgtaat acgccatata gctggtgaag
    15121 gcgttattat tgacatgttc ggtatattcg tcaggcccaa taacatcatg aatttccaga
    15181 cggtcgttaa ccctcaccgc gcggctaatc cagaactttg cagtttccag aagtagcgcc
    15241 atgccttcat gcgcaatgaa acttccatcc cccgtggtct gccagtattg aataaccgcc
    15301 caggcgatat cggccaccag atgatgttcc gcctgcgccg aggccacttt ttgccgcagc
    15361 ccggtgcgaa tgttaatggc ggcaaattcc ggcgtctctt cttcgccgct gcgcgcgctt
    15421 tcccacggaa atagcgcgcc ctgccagccg ttgcgtcgcg ctttctcctg cgcgcctggc
    15481 aagttgtgcc agcgataacg cagtaaactt cgggcaaccg tcggatcgct aaacagatga
    15541 aacggtaaca aaaatacttc tgtatcccag aaaacgtggc ctttgtagcc ttcgccggtt
    15601 aagccttttg ccgcaatgct gctgcgctcg tcgtgggcag gcgtcatgat gcgcagatga
    15661 taaagcgcat aatctaacgc ttgctgatcg tgcgcttcgc cgccatttac cgtgatacga
    15721 cgtttctgcc accattgacg ccagttttct gttgatactg caagaagttg gtcgtaactc
    15781 tgctgcgcgc acatttcaag ctggcgaagc gacgcgctgc cccactcgtc taaaacggct
    15841 tgcctgtcat cccgccagtc gatccacacc agtttttgca acgtcactgt ctcgcctgca
    15901 tgaagctgcg cactggtatg ttgctgcaaa cggcgctctt tggcggtata gcattgctgc
    15961 acatcaccgc tcaccataca gcaacagctg atggccacat cactgcgtcc atcctgggtg
    16021 gtgtagatcc cctgcatcag atgctgacca aacacccgca cctgggtttc gtcgagatgt
    16081 tggcgaccgt ggttggtttg cgtggcgtcg atacctgttg aaatcagcac tgacgcgtcg
    16141 gcgtccagtg gcgtaatagt gatttccagc acaatgagcg gcagttggtc tgccgaaaca
    16201 aagcgacggc tggcgatggt gtaacctgtg ccgttgctgg tacgccagac aacgctacgg
    16261 cgtaattctc cactggcaaa gtcaagttca cgctgccagg cttcgcggga taacgagaaa
    16321 acctcaccat ttatggcaat ctccatcccc aagatatcag gcaggttcac cagttcgttg
    16381 atttcacctt ttcccgcccg atgatacagc cccgccagat acatccctcg cgtctggcgc
    16441 gtgtaatctt cttcatggct ggcgcgaagc ccaagatagc cgttcccctg cgccatcagc
    16501 gatgcatact tgttcagggt atgctggctg aaatggggtt ctgataacgt tactggcctg
    16561 gtcataattc cacacgcgtc cctgtttctg cggattgata caacgccgcc accagttgct
    16621 ggatgatgta cccctgctcg gcgtcggcta tcatcacggg cttgccctgt acgtgattga
    16681 taaaggcttc catgctgcgc aaatggcggt tgtcgtctgc cagttcccgt tgcatcagcg
    16741 tcattaattc accgttgtta tcggtgtaga tatgtgctgg aaacagcgtc gcaccggctt
    16801 tatcaccaca aaagctgacg ttcataatcg actgttcgcg gatgttgagt gcaaatgacg
    16861 tttccagcca cagaatgccg ccgttatgaa attcaatggt gccaaacagc gaatcttcga
    16921 cgctataagt tgccggatcc cactcgccaa attgaccaca gctcttttgc gtgccgatct
    16981 tttgaaagct atgcgcattt acgcttttca ccgccggaaa gcccagcaca tacatcgcag
    17041 catccagcat atgaatgccg atgtcgatca gcgggccacc accctgcagt tctttattgg
    17101 taaagacgcc ccagccagga acgccgcagc gacgcagggc gcgggcggtg gtaacgtaaa
    17161 tctctcccaa aacgccgttg gtcacctggt cacgcagctg ttgcgtatcg agcgcaaaac
    17221 gatggtgaaa gtcgtaggcc agcaccttgc ccagtttgcg cgcggtatcg cacatttccc
    17281 gcgcctgttc tggcgtcatg gcgggcggtt tttcgcacat cacatggcag cccgcttcca
    17341 gtgccatcag ggtatgttcg taatgaaaac ggttaggtga gcagacgcta accacatcag
    17401 gtttcaccgc cagcagcatg gcctgcggat cgtcccacac ggatgcattc ccgtattttt
    17461 ctgccagcgc ctgcgcctgg gaaaggcggc tgtcacagac agccaccagt tccagatcgt
    17521 tgcgggtgca gtagtacgaa gcatgaacct tatccgccac ctggcctgcg cctattatcg
    17581 cgacccgcag cggagagctt gtcattgcac ttttcacaaa gacctcttag caggtacgca
    17641 accaggccaa cgaatcacgg tacgcctggg caggatcttc cgcccggata cgcccttcgt
    17701 acactacata gccctgatag ttatccgcgc gcagctgttc aaacagcgcg tggaaatcca
    17761 gggtgccgct gcccggctgg tagcgatggt tatccgcaat atgcacatga ccgagcaggt
    17821 cgcggttgtc atgcagcgcc tgcgccaggt tatcttcttc gatattcatg tgatagaaat
    17881 cgccgataat ctgtacatgt ttaagatcgt tttcgacgat gtaacggcgg gcatcggcga
    17941 gggtgttgat catatgatcc tgatagcggt ttaacagttc gagatacacc acggttccgg
    18001 tacgcgcggc gacctgttcc agtacgtgca gggaatcact caccattttg cggtcgccgt
    18061 ccaggctacg cggcgaggtc atcggcggta agcggaaggt aaacatgccc cacgctgccg
    18121 gaacgacgat acctttaccc cccacttctg ccagcgcttc gagaatgcgt tcgatctgct
    18181 ttaagccatt aagacgacgc tcttcgataa agtcgccaat ccaaccgtca tagccaccgc
    18241 aggcggtggt caccggtaaa ccggtttctt tgattgctgc tttgacttct tcgagattgt
    18301 tgaccagcag tttgccgtca atctcaaaac catcgaagcc catctctttg atataacgaa
    18361 atttctccag aatgttttcc ggaaagaatg cctgattctg tgtgcctatt ttcatttttt
    18421 cattcctttg aattaaaacg taacgcccat tttgatgctc tgttccggat gctgatcgac
    18481 atactgcatg tagctttccg ggctattggc aaaggtcact accgggtcga ttaaatcttc
    18541 gcaattgaga taaccgttca tcagcagttc ccagcaggtt tcttcaatac gcttacggct
    18601 ccagcgcgga taatccgggt tcggttcgct gcacgcgcgg gagaaaacaa ttttggcgtt
    18661 attgaaatgc gcttcgcgtc cgaggttaaa accttcagca aatggtttgg caaacgcgac
    18721 ataagagatg gtgccgccat aagcaaggcc acgcagcgcc gattgcagcg cgtcggcgta
    18781 accgctggtt tcgataatca catcggcacc ctgcttgccg gtcagcgttt tgatctcttt
    18841 tcctacgtca gtgccaatgg ggttaaggca gaaatcagca ccgtggcgac gggcaatatc
    18901 acagcgatag gcgataggat cgacgccaat caccaccgac gcgccagcgc gtttcgccag
    18961 ttggatggct atttgaccaa tcgcgccaag ccctaccacc accacaaaat cacccacgcg
    19021 cacgttggca tcgcgcacgc cgctcatggc aaactgcgcc gggtcgtaac aaacggcgtt
    19081 tttccacgag ctgccttgcg gcattttgcg cagcttgtag ttattcaccg cgttaatgat
    19141 gaccgtctcg gagagcgggc cgtagccgca tacgctgtcg cccaccgcgt agtcggtaac
    19201 gtcgctgccg cactcgataa tgtcgccaac caccatgttg ccaagctgga atttgccaaa
    19261 ctcaatgccg cgcggcgcat ctgccggacg cggagtgaac atctgccatt cgccgttaaa
    19321 gtcttcatcg ataaacgggc tggcggcgcg gaagtcgacc acttccgttc cgtgtttcgg
    19381 tgcgccgaaa cgcacgcgga ttttcacttc attggctaaa atcgcccgat cttcatactc
    19441 aaccagcgca gcaacacgcg gtgctgtggc tactaacttt ttcatttaaa actccttgta
    19501 aagaaactgg ccgctttagc ccttcacgcc accggcggtc aaaccactct taataaaacg
    19561 ttccgaaagc gcatacataa tcaccaccgg caatgcggtc accagtgagg ccgccatcat
    19621 ccgtccccag atgtaatctg gcgtactgaa cagcgcgttc aggcccaccg gtaaggtgaa
    19681 attgctggcg ctggagagga agatcgacgc aaacagatag tcgttccacg ccaccataaa
    19741 gcagtagacg aacacggata tcagcccgga catcgccaac ggcacggtga tgcggaagat
    19801 aatttgcaga cggttgaggc catccatcat cgccgcttct tcgatctcat cggggatggt
    19861 gtcgaagtag cttttcagca taaacacggc ggtgggcaga gtttgcgtca ccatggtgat
    19921 gatcagcgcc atctcagtgt cgtaaatgcc cagcgcggtg atgattttga acagcggcac
    19981 caccagcaaa atgccagaga acatatacac cgtgtaaaag ctggcgttga tggtcatccg
    20041 acctttaaag cgcaggcggg aaagcgcgta agccccaaga atgccgagga ataccgccac
    20101 cacggatgaa accacagaca ccaccagact gttacggaag tagtcgacaa acgggaaaat
    20161 catcgggtta aaaatgtcga cgtaatgctc cagcgtccac tgctgcggca gcagcgtagg
    20221 atgcagtgag atcgcctctt tcgcgccctt gaacgaggtc atcagcatca caaaaaatgg
    20281 aaacagcgtg atgatgagaa acagcgccag cccgcagtaa aaaccgatgc gactgagtgt
    20341 gcgtttattt gttgccattg aggttcaccc gtttcctggt cagcagaatg acagcgaaaa
    20401 taatgatgaa gagcaccacc gagatcgccg ccgcttttcc taaatcatta aaggcaaagg
    20461 cggttttgta gagatataca ccgagaatat cgaccttggt cgtcagcaaa taaacatccg
    20521 cgaacatgta gaacatccag atggtgcgca gggtcaccac cgtcgccagg accggcataa
    20581 tcgcgggcag cgtgacgata cgaaaccgtt gccaggcatt agcgccatcc atctctgccg
    20641 cttcgtacag cgatttgtcg atggtctgca aaatcgccag aaacgagata aaggcatacg
    20701 ggaagtagcg ccagatggcg aacagcacca ccagcacaaa gctactgccc ggattatcga
    20761 accacagcgg tgcctgctca tagagatgca gaagatcgac gccgaggtag ttcacaatgc
    20821 cgtagccgtt gttgaacatg tatttccagg caaacaccag cgaaatggac ggcgttacgt
    20881 aggagaggat caccagcgaa cgcgcggttt tgcgcaggcg gaactcgcgg ttgaaaaaca
    20941 tcgccactgc cagcccgagc acggtgctgc ccgccaccac cagcgcggta taccagaccg
    21001 tcatccacag cgagtgccag aagccgggat cggagaggat acgcacatag ttactcaccc
    21061 caacaaaggt tgactcgatg ttgggattga gcggcagacg taaaaaactg atttcgatat
    21121 tcgacaccat tggccaggcc accagaccac ccagcagtaa taagctgggc gcgagaagca
    21181 gcagcgcaaa gggcatatcg gaacgacctg aaaaaagcct gttcattgcg gattcctgtc
    21241 ctgggtttag tgctgttcga tcagttcatc cagctttttc tggctcgctt gcagcgtgcc
    21301 agggagatcg gctttaccca cggtgacgtt atgcaccatg gagctcacca cgccagaacc
    21361 cgtcacatca cccatgcggg taaagttttt atcccctact gcaccaaaga cctgaatatt
    21421 tggcagttca ccgattagct gattcggtag ttcacccagc gccttaataa cgtcgttgtc
    21481 tttccaggtg gcggtagtga caaccgcttt attcaccggc agcgcagcac ctggcgacat
    21541 catcacccag tcggcaatgt tgtctgcctg ctccataaag gtgacaaatt tttcagctgc
    21601 ttccgtctct tcggtctttt gcccggcggt aatggtcagc gaggtcaaca tgccgtagac
    21661 cgcagagttt ttctcggttg gcaccacgaa accgacgttt ttcgggtcgc cttctttaat
    21721 cacagccgga aggatatagg tggagtaaat cgccatcggc gcggtgccgt tcataaaggc
    21781 gtctttcact tccatgatgt cgttagaacc cggcatagtg ttggcagcaa ggtcgcggta
    21841 ataggtcagt gcctgcatca tctctggtgt atcaagggtg attttgcctt cggcgttaaa
    21901 gacgttagcc tggttggata acgcaaactg ggagaaggat tgttccgtca acacgctttc
    21961 tgctgtaggc agcgcaatgc cgtatttttt attcgccggg tcattcagtt tctgtgcaac
    22021 gtccagcagc tgttgccagt ttttcggctc ctcaagcccc gcttttgcca gcacatcttt
    22081 gcgataccag ataccgccaa tccaggcgct gacaggaaca ccggtccatg cgctaccatc
    22141 ttcggtacgc acaatacgca gtacgccatc gtaaaacgcg ccttcaccaa cgttgctgat
    22201 gactgtggca accgctttgc gatcaataag ctgctctttg tccatcactt tggcgtagtc
    22261 atggctggtt tcgatcactt ccggcagcga accgctacgt gaaagagtaa tgactttagt
    22321 gttataggca tcttcttcca cgggcacttg cttaacggtg atgccagggt tttctttttc
    22381 aaaacgggca atcaatttac tgataacggc ctggcgctcc tgctccaccg aagaatgcat
    22441 aaattcgatg gatacattcg ttttattttc ttctttacag cctgaaatca gggcgcagga
    22501 aaccagtgct gataacagca cgatttttga tttaatcatg agatgttcct ttttatttaa
    22561 tccacataac ctgccagggg cgcagcgtta tttcattacc caatatatca acttcactaa
    22621 tcagatcccg accatgcaga ttagtaatat ttacatgctg aatattttta ctgacattaa
    22681 acaatccagt cagacaatta ccatcagcgt tacttctttg aatacgcatt acggatgaat
    22741 taatcgtatc aatggtaaaa ttattatccg gatgaaactc gttatggctg cgacgaagtg
    22801 taattaaacg cgacaactca tgatataccg catgccttaa tgtagcttca tcgttcagtt
    22861 ctcgggttat ctctttactg tgatattttt tacggttaat cgcacggtta tatccgagtt
    22921 tttcgacacc tgcgtaatca ttacgcgagc caagaatact ttgaatatat atcgctggca
    22981 caccggggaa acttaacaaa atcgcatggg cgagaataaa cctggcgcaa cgttcttcat
    23041 cgctactctc acggcggctt aacgcatcca tataggtcac atttatttca tacggactgc
    23101 gtgtaccgtc gggattattt ttccagttta ctaatgcacc ttcctgctgt aacgcctcga
    23161 ccagctctaa tatttcgctt tcaggcaaca agccccgtag cgggtttagc ccgatgccat
    23221 cgtgagaggc gaggaagtta aaccaggtgg tgttgctgga aggtagtgtc aggttttgcg
    23281 cccacgcaca aagcgcctca acgttctgtt tttgcaccgc atgcagcacc agtggcggca
    23341 gcgagaactg gtacaccata tgtgcttcgt catcgcctgc gccaaagtaa gcaatgttgt
    23401 ctttatgcgg aacattggtc tcggtaatga tcactgtacc tggcgcaacg ttatcaataa
    23461 tcgaccgtaa cagtttgata atcagatgtg ttttttccag atggatgcag cttgttcccg
    23521 gctctttcca cataaagcca acggcatcca ggcggacata ctcagcacct ttcgcaaggt
    23581 aacagagtaa aacatccacc atcgccagca acacttcagg gctacggtaa ttcaggtcaa
    23641 tttgatcgtc actaaaggtg gtccataaat ggcgcgttga atgatcgcgc atctggaatg
    23701 gcgttaataa cggtaacgca cgcgggcgag tgacggcgct gagatcggtt tgcgggtcaa
    23761 cggcaataaa aaaatcttca aaacctggat gctgttgtaa atagttttta aaccattcac
    23821 tttttgccga catatggttg cagacaaaat caaacattaa atgactgcat tcaccgagtt
    23881 gctgaatatc ctgccactcc cccgcttcac tggcgacctg atgataatca attaccgaaa
    23941 agccatcatc agatgaccat ggataaaacg gcaacaaatg aacatgtgaa aaaatgcttt
    24001 gcagccattg atggtaaaac tgattaaatg tgggtaatgg ttttaaatca ttgctgtgaa
    24061 attgatcggc ataggtaatt aacacgacat cactttcatc ccagtgtttt ttacgtcgct
    24121 gtgtaattaa tcgtttcgca ctctcaagac gcgttacaag tttctgtaaa tgagttgcgg
    24181 taaatgttcc accgtagatt tcgtccaggt aatccgtaat tttctgtttc atgttgcctt
    24241 tccgtggtag cggtcccatg aaacgagaga ctactccgca gaaaataaac tgtcaattga
    24301 gcacaagggt tttagtcacg caggaaatca ttttttacca gggaaaaagc gtatttgtga
    24361 gctgacgcaa ataatctatg gggatgtaaa taaggtgtga cagaaaaaaa aacggcgcat
    24421 aagcgccgct catggtgaat tcttttaacc tttgaccttc ggcattgcga tgtctttcag
    24481 gccaccggcg ttctcaacgt gggtatatcc catctcgcta aggatctctt ttgcttgccc
    24541 tgactggcgt ccggcattgc aatacacttt cacggtgtcg tttttatccg gaacggcggt
    24601 ggcaatgcgc tctttcactt ccttcagggg aatattgatg gccccctgaa cgtgctcttg
    24661 ctgatactgc tctggaacac gaacatcgat ccagtgttca gcggcgaaaa cgggcagtga
    24721 aaacaccagt gccagagcaa gtaagccttt tttaaacatg taagcgtcct tctatggatg
    24781 aaaattgcca tccattatac gcctgagatt taacaatttt tgcgaaactc ccctcacctt
    24841 ttataacgct gtgccagttt attagcagcc cgacttaaca gcggttccag cgccacagcc
    24901 agcaacattt tcagcggtcg gcgagcaact gattttatcg cccagcccgc cacacccgcc
    24961 gggccatagc gcagtgcggt aagaagtacc agcttgcctg ctaatttgaa accaggcttt
    25021 accttttgcc cggcctgttg ccagcgagta ttcataactt tcctcacagt tgacggaaac
    25081 ggctacgtaa cgtgaaagta tcggaagtga cataacgttc catctcgcgt aaacgcgttt
    25141 cacttgccgc cagttcacgg tcgacttcat ccagcaattc gctgctggaa ggtagctgct
    25201 caccaaaggc catgttgtcc ggcattggat caagcgcaaa tgacaaaatg atgtaagcaa
    25261 ccagggtaaa cagcgccaga ccgaagaaaa tcgacagcac caccaggata cgcaccagtt
    25321 ttaccggtac atcaaaatag ttggcaatcc cggcgcagac gccgcggacc atgccctgct
    25381 gtggaatacg ccataatttt ttattgagat taatgcccgc cattagcgat ccctccagtt
    25441 cggatgttct gcatcaagaa tagattccag cgcctgaata cgttcgcgca tccgttttgc
    25501 ttcatcagcc agttgcgcta atcgctgctg ctcactttgc gacaattcac tgcgaccaga
    25561 acgattgctg taatgcagcc ataaccagat cggtaaaaca aacagcacaa aaatggttaa
    25621 cggaatagcc agaaatagcg cgctcataag tactccttag acgatgagcg gcggcgcgtt
    25681 cggacgccgc ctggatgtta ttattgattg tcttgcttca ttttggcttt taattgtgcc
    25741 agttgttcgc tgattgcatc atcggctttc agttcggcaa actgatcgtc cagcgatttt
    25801 tgtttaccga agctgtggct ttctgcttcc gcttccatct ggtcaatacg acgttcgaaa
    25861 gattcgaaac gagccattgc ttcatccagt ttgccactgt ccagctgacg acgcacatcg
    25921 cgcgacgagt ttgccgcctg atgacgtaac atcaatgcct gctggcgagc gcgtgtttcg
    25981 ctcaatttgt tttccagctc accgatctct ttcttcatgc gtgccagcgt gtcgtccacc
    26041 agcgtcactt catgttccag gctcttaatc aaatcggtca gtttctgttt ttcaattaac
    26101 gctgcacgtg ccagatcctc tctctctttc agcagcgcca gttcggcttt ttcctgccat
    26161 tcaacttcac gcgccgacgc ttgttcaata cggcgagtca gctgtttctt ttctgccaac
    26221 gcgcgcgccg aagtagaacg tacttcaacc agtgtatctt ccatctcctg gatcatcaga
    26281 cgaaccagtt tctgtggatc ttccgctttc tctaacagag cgttgatgtt ggcattcacg
    26341 atgtcggcaa agcgagaaaa aatacccata atgttgtcct cttgatttct gcgttcagga
    26401 ttgtcctgct gaactgttaa tacaatttgc gtgccaattt tttatctttt tgatttataa
    26461 agatctgatt gaagaatcaa cagcaacatg ccaggatgag ttagcgaatt acactaacaa
    26521 gtggcgaatt tcatcatggc agaatacaaa gataatttac ttggtgaggc gaacagcttt
    26581 ctcgaagtgc tggaacaggt ttcgcatctc gcaccgctgg acaaaccggt gctcatcatc
    26641 ggcgaacgcg gcaccggtaa agagctgatt gccagccgcc tgcattatct ctcctcccgt
    26701 tggcaagggc cgtttatttc ccttaactgc gcggcgttaa atgaaaatct gctggattcc
    26761 gaactgtttg gtcacgaagc gggggcgttt accggtgcgc aaaaacgtca tccagggaga
    26821 tttgaacgtg ccgacggcgg tacgctattt cttgatgaac tcgctacggc accgatgatg
    26881 gtgcaggaga aattattgcg cgtgattgag tacggtgaac tggagcgcgt tggcggcagc
    26941 cagccattgc aggtgaatgt gcggttggta tgcgcgacga atgccgatct cccggcgatg
    27001 gtcaatgaag gcacttttcg cgctgacctg ctcgaccgac tggcttttga tgttgtacaa
    27061 ctgccaccac tgcgcgagcg cgaaagcgac ataatgttga tggcagaaca ctttgccatc
    27121 cagatgtgtc gggaaatcaa gctgcctctg ttcccggggt ttacggagcg cgccagagaa
    27181 acattgctga attatcgttg gccgggaaat attcgtgaat tgaaaaacgt ggtggaacgt
    27241 tcagtgtatc gccacggcac cagcgattat ccgcttgatg acatcattat tgatcccttt
    27301 aaacggcgtc cgcctgaaga cgctatcgcc gtttcagaaa ccacctcgct tccaacactg
    27361 ccgctggatt tacgtgagtt tcagatgcag caggaaaaag agttgctgca actcagtttg
    27421 caacaaggga aatataacca gaagcgcgcg gctgaattac tggggttaac ttatcatcag
    27481 ttccgcgcgt tgttgaaaaa gcaccagatt tagcgaagtt gagcaataca acttgccgga
    27541 tgcggcgtga atgctttatt cggcatacat aatcaatacg tcgtttgcag gcctgataag
    27601 cgcagcgcat cagacattat tgcgttgggc tattaatcgc tcagcgcatc ctgcaaaatt
    27661 ttcattgccg catcgaattg cgcatccggg atggtcagcg gatacaggaa gcgaatcacg
    27721 ttgccgtatg cgccacaggt cagcaggagc agcccctgcg ccagcgcgcg ttgctggatt
    27781 ttctgtgcaa tcgccgctga cggctcgccc gtttgcggat cgttaaactc tgccgcaatc
    27841 atcgacccca ggccgcgtac cgcagcaatg gccggaacgc tttctttggc atcaatcaac
    27901 gtgtttttga gacgctggcc cagttgattc gcgcgttcgc agagtgattc tttgtcgata
    27961 atattgagca ccgcgtgcgc ggcagccacc gccagcgggt tcccggcgta ggtgccaccc
    28021 aacccgcccg gcgcgggcgc gtccataata ttcgcgttac cgaccacgcc cgaaagcggc
    28081 atcccgcccg cgaggctttt cgccatcgtc attaaatccg gcttatcgac gtaatgatcc
    28141 atggcaaaca gcttaccggt acgcgcaaag ccgctttgca cttcatcggc aatcatcaca
    28201 atgccgtgct cgtcgcacag gcggcgaatg gcggcaacca gctcttttgg cgcaacgttg
    28261 aaaccgccct cgccctgcac cggttcgaaa ataatcgccg ccacctgctt cgcttcgatg
    28321 tctgatttaa acaagcgttc gatggcgtcg agggagtcct gtgttgaaat gccgtgtaaa
    28381 tctgacggat aaggtacgtg atacaccgaa ccagggaacg ggccgaagcc gattttgtac
    28441 ggagcgacct ttccagttaa cgccatagtc atatacgtac gaccgtggaa gccgccgcta
    28501 aacgcaatca cgccagggcg tccggtatgg gcgcgagcaa ttttcaccgc gttttccacc
    28561 gcttccgcgc cggtagtgaa gaacgcggtt ttggcctgcc cgctcaccgg ggcaagggcg
    28621 ttgattttct ccgccagggt gacgtagctt tcatacggca caatctgata cgcggtgtgg
    28681 gtaaactgtt gcagttgctg ctctaccgcc gcgaccagtt cagggtggcg gtggccggta
    28741 tttagcaccg caatgcctgc ggcgaaatcg atgtactcgt tgccctcaac atccttcagc
    28801 gtggcgtttt cagccgactg ggcgaagaag ttacacatca cgccaacccc gcgtggggta
    28861 gcagaaagac gacgctgatg gaattcattg ttgctcatgt ttcacacctt ttgactcttc
    28921 actgttaatc ggaaattaaa cgcccagacg atcgcgcagg ctgtaatagg ctgcgcccat
    28981 cgcggtaaac ggtactcgca gcgtgcgccc gccggggaac gggtaatgcg gcagattggc
    29041 gaaggcatcg aaacgttcgg cgtcgccgcg cagcagttcg gcaatcagac gcccggcaag
    29101 atgggtacag gtgacgccgt ggccgctgta gccctgcatg taatagatgt tggtatcgag
    29161 gcgaccgaac tgcggcatcc gtgaaagggt cagcaggaag ttgcccgtcc agcggtagtc
    29221 gattttgacg cccttcagtt gcgggaaggt tttcagcagt ttcggcacca caagacgctc
    29281 aacgtcatcc gggtcgcgcg cgccgtagac cacgccgccg ccgtacagca aacggttgtc
    29341 ggcggtaaga cggtagtaat caagcagata attacagtct tccacacagt agtttttcgg
    29401 gatcagcgaa cgggctaaat cttccgacag ccgttcggtg gtgatcacct gcgtgccgca
    29461 cggcatgctg cgtttcgcca gttccggctc tactttatcg cccagatacg cattcccggc
    29521 gacaatcaca tacttcgccg tcacctgacc tttggcagtg cgcaccaccg ctggcgtggt
    29581 gtgctggatc tgcgtcacgg cagaaagttc atacacgcgc ccgccgttga ggcggatggc
    29641 gtccgcttcg ccaatggcga ggtttagcgg atgaatatgc ccaccgctgt gatccagcag
    29701 cgcaccggta tagcgatcgc tggctacttc acggcgaatg gcgttggcgt ccagcaattc
    29761 cagctgttta ttgccgtagc gttcccagtt ctctttctgc tcttcaagtg tggcgagctg
    29821 tttatcattc atcgccacaa acaggccgcc ggggcggtag tcgcagtcaa tctgataacg
    29881 tttgatacgt tcgcggatga tctcaccacc ttcgaacatc atgctgccga gcatacgggc
    29941 ggtgtccatg ccgtagcttt tttcgatcac gtcgatgtcg cggctgtagg agttcacaag
    30001 ctgcccgcca ttgcgcccgc ttgcgccaaa gccgatgcgt gaggcttcga gaaccactac
    30061 gtcaaagccc gcttccgcca gatgcagcgc ggaagagagc ccggtatagc cgccgccgac
    30121 cacgcaaacg tcgcaggaaa tcgactcatt cagcgtgtcg aatggcgcgt atttattcgc
    30181 actggcggcg tagtaactgc tggtatgttc ggtcatttca ggcctccagg cttatccaga
    30241 tggttttcag ttcggtgaat ttttcaaggg catgcaggga tttgtcgcga ccgttgccgc
    30301 tctgcttata gccgccaaac ggcacggtca tatcgccgtc gttgtagtta ttgacgaaga
    30361 cggaaccagc cttcaggcgg cggctcatgc ggtgcgcgcg ggagaggtcg cgcgtccata
    30421 ccgccgcgcc aaggccgtac tggctgtcgt tggcaagctg tagcgcctgg tcttctgatg
    30481 tgaaacgcgt gaccaccagc accggaccga aaatctcttc gcggcttaag gacgcattcg
    30541 ggtctacatc cacaaagatg gtcgggccga tggcggcagc cagctcagcg ttacgaccat
    30601 ccagcagcag ttgccctttg ctttcgcctt cccgaataaa gctatggacc gagtcagcgt
    30661 gagcgctgtc gattaaggtg cccatggtgg ttgcgggatc aagtggatgg cccggctgcc
    30721 agttttgcgc ctgctgtttt aacagggcta agaattcatc ggcgatgctc tcttccagta
    30781 acaaacgcgt tccggcgatg cacacctggc cctggttgta gaagatgcct gcggcggtgg
    30841 cgcttgccgc tttttgcaga tccggacaat cggcgaaaac gatgttggcg cttttgccgc
    30901 ccgcttccag ccagacgcgt ttcatgttgc tctcgcccgc atctttcagc agctgtttcc
    30961 cggtacgggt cgaaccggta aaggcaatgg cgtcgatatc gttatgacgc gacagcgcct
    31021 gccccgcttc atgaccaaaa cctgtcacca cgttcaaaac accatccggc aagcctgctt
    31081 ctttcgccag ccccgcgaga cgaatcgcac tgagcggtga tttttcagac ggtttcagga
    31141 caacgctgtt ccctgctgcc agcgccgggc caagcttcca gcaggtcagc agcagcggaa
    31201 agttccacgg tacgatggcg gcaatcacgc cgaccggttc acgcacgatc atcgccagct
    31261 catggctact ggtggtcgcc acttcgccat acactttgtc gatcgcttcg gcgtaccagc
    31321 gaatggcgcg cgccgcgccg ggaatatcat cacgcagact gtgacgaatc ggtttgccgg
    31381 tgtcgagagt ttccagcagt gccagctctt cggcgtgggc ttccattaaa tcggcgagtt
    31441 tattcagtac cgctttacgt ttagccggag aagagagtga ccagtcgccg cgttcaaata
    31501 cgccgcgtgc tgcgctcacc gcacggtcga tatcgacgct cttgccgcgg gcaattttcg
    31561 ccagcggtgc ctgggtgacc ggatcaacgg tttcaaaggt ttcattttcc gccgcagcag
    31621 tatattcacc gttaataaat aagcggtttt caatggcgag acttaacgct ttatcctgcc
    31681 agtaagccag atgatgaaaa ttcattatga ctcctgtttc acgtctatca gatatatgca
    31741 gtttgtgaac gtcagggcgc agagatcccc gggccgcatg cccgtttatt tctggcgaca
    31801 ttctttatat acacttcatc cttcaagccg cctctgcctt ggctgcgttt gctcccccga
    31861 atcacttacc tgagtaagct catcgggatt cgctcacttg ccgccttgat gcaacttgaa
    31921 tgattttgtg tatagattgc cgggcgcatt gcgcttaccc ggcttacaga acaagaagat
    31981 taaaacgtgg tgggcgtatg ggcgctgata attcggcaaa tacctgccga cgtattactg
    32041 aaactgtgcg ggatgccggt attaatggca taactttgcc ccgcgacgag atgataatcc
    32101 tgaccattaa tcgtcagaac aatttcacct tccagtacag tgcctatttc ctcaccctga
    32161 tgcttaattc tttccccagt ggttgtgccc ggctggtacg tttcaaagat catcgccagc
    32221 gtgcgattcg ggttaccgtt atgaaccagc ttcattgaca caccctgact gcccatctca
    32281 attaagtcgt cctgattaat gacgacctgc ggctcatcag gtttttccgg ctcggaaaag
    32341 aattccgaga gtgacagacc atacaccttc agcagctttt gcagcgtact gatggcaggg
    32401 ctgactttat cttgttctat cgtactgata gcactgtgag tcagcccgga gagttcggcg
    32461 gcacgacgtt gtgaaagccc ctgctgctgg cggatttccg acaagcgttt tcctggcgcc
    32521 agtccctcat cactcatatt tgcatttcct taaactgtag tggtcagagt cgctgttttt
    32581 cagcgatatg gtgctgacaa gcggtgataa agccctcgaa caatatacgc gaaagcgcgt
    32641 actcgctact gttccattcc gggtgccact gtacgcccag cgcaaaagga tgattgatga
    32701 cgctaaccgc ctcaactaag ccatccggcg agcgagcttc aacacgcaac cgtgggctaa
    32761 cgaccttcgc cccttgtcca tgtagagagt ttacccaaaa gttgctacat tcaggtaaca
    32821 acgcagacag taatcccccc tctacaacct gaacttcatg cgacggtgca tattgctgtt
    32881 ccaccggcag ttcgggatct tcccgatgtt ccagcaattc aggctgttcg cacagcttgc
    32941 gatgcaacga accaccggtt gccaccacta gttcttgtaa accccggcag atggcgaaaa
    33001 tgggaatgcg cctttcgagt gcggcattaa ttatcgccat gctcagaaga tcacgcccgg
    33061 gatcggcgtc aggctcatcg ccgttttcac catataggtg cggctgcaca ttgctgggac
    33121 taccaggaag ataaatgcca tcgagtttcg gcaaaagttg ttcaagtaac gacggttccg
    33181 ccagcgcatg tggtagcgca attggcaagc cgcctgcgtg gatgatggca ttcaggtact
    33241 tttcttgcag agtctgggtc gcatgaccct taagcctgtt cctgcacatt acgacaccga
    33301 taaccggatt gttcattata ttttccatgc tcaatctcac aaagtggact aaattatcgc
    33361 cattactgcg ctttaaatga cctttatgtt caatattttt tcaatctagc agtgagtttt
    33421 catttttgca aactcaattt aacatttgac aaacatttag tttgcataca gattcgaatg
    33481 gtggtcatta tattttacgc tttgataacg agcggaaaac aaaccaaagg cgaagaatca
    33541 tggaaaccaa tatcgttgaa gtagagaact ttgttcagca gtcagaagag aggcggggta
    33601 gcgcctttac gcaggaagtg aaacgctacc tggagcgcta cccgaatacg caatatgttg
    33661 atgttttact tactgatttg aatggttgct tccgtggaaa acgtatccct gtttcaagcc
    33721 tgaagaagtt ggagaaaggg tgttatttcc cggcctcggt gtttgcaatg gatattctgg
    33781 gcaacgtagt agaagaagcg ggtctgggtc aggaaatggg cgagccggat cgtacttgtg
    33841 ttcctgttct cggttcctta accccttctg ccgccgatcc agagtttatc ggtcagatgc
    33901 tcctgaccat ggtcgatgaa gatggcgctc cctttgacgt tgagccgcgg aacgttctta
    33961 accgcctgtg gcagcagcta cgccagcgcg gattgttccc ggttgtagcg gtagagctgg
    34021 agttctattt actggatcgt cagcgcgacg ctgaagggta tctgcaaccg ccctgcgcgc
    34081 ccggcaccga tgaccgcaat acacaaagcc aggtttactc cgttgataac ctcaaccact
    34141 tcgccgacgt gctcaatgat attgatgaac tggcgcagtt acagttaatt cccgccgacg
    34201 gtgcggtcgc cgaagcctcg ccgggtcagt ttgaaatcaa cctttaccat accgataacg
    34261 tgctggaagc ctgcgatgat gcgctggcgc taaaacgcct ggtgcgtctg atggcagaaa
    34321 agcataagat gcacgccact tttatggcga agccgtatga agagcacgcg ggcagcggga
    34381 tgcatatcca tatcagtatg caaaataatc gtggcgagaa tgtgctttct gacacagaag
    34441 gcgaagattc gccgctgctg aaaaagatgc tcgccgggat gattgacctg atgccgtcgt
    34501 cgatggcgtt gctggcacca aacgtgaact cgtatcgccg cttccagccg ggaatgtatg
    34561 tgccgacgca ggcgtcgtgg ggccataaca accgcaccgt cgccctgcgt attccgtgcg
    34621 gcgaccgtca taatcaccgc gtggaatatc gcgtggcggg tgccgatgcc aacccatatc
    34681 tggtgatggc agcgattttt gccggtattt tgcatggcct tgataacgag ctgccgttgc
    34741 aggaagaagt cgaaggcaat gggctggaac aggaaggctt acccttcccg attcgccaga
    34801 gcgatgccct gggtgagttt atcgagaatg atcacctgcg ccgctattta ggcgaacggt
    34861 tttgccatgt gtatcacgcc tgtaaaaatg atgagctgtt gcagtttgag cgcctcatca
    34921 cagaaacaga aattgagtgg atgttgaaaa acgcgtaatt ccccatgcgg ggttgtttca
    34981 tcggcctgag cggagccagg cctgacattt gctggtaatc cagacatttc ccggatgtcg
    35041 cgttatggag cgcaggcggc aacgggcttc cgttaacgat taagactgtg acgaggaaat
    35101 gagatgatgc cgatgattaa atccccgcat ggcgagggag gctgcgtatg cgcccctcct
    35161 gctactgact ggactccgcc ccctttgctt cccttgctaa acaggtttga tttcaggttg
    35221 acacgaccgc aaaccttatt acgcagggga ggcagcaatt atggctatta attcaccact
    35281 gaatattgct gcgcaacccg gcaaaacccg tctgcgaaaa tcactgaaat tgtggcaggt
    35341 ggtaatgatg ggtctggcct atctcacgcc gatgaccgta tttgatactt ttggtattgt
    35401 ctccggcatt agcgacggtc acgttccggc gtcctatttg ctggcgctgg cgggcgtgct
    35461 gtttaccgct atcagctacg gcaaactggt tcgccagttt ccggaggccg gttcggccta
    35521 tacctacgcg caaaagtcga ttaatccgca cgtcggattt atggtcggct ggtcatcact
    35581 gctggattat ctctttttgc caatgatcaa cgttttgttg gcgaaaatct atctctccgc
    35641 cctcttcccg gaagtgccgc cgtgggtgtg ggtggtaacc ttcgtcgcca ttttaaccgc
    35701 cgcgaatctg aagagcgtca acctggtcgc taacttcaat accctgtttg tactggtgca
    35761 aatctccatc atggtggtgt ttatcttcct ggtagttcag ggactgcata aaggagaagg
    35821 cgttggcacc gtctggtcac ttcagccgtt tatcagcgag aacgcgcacc tgatcccgat
    35881 tattaccggg gcgacgattg tctgtttctc gttcctcggt ttcgatgcgg tgaccacgct
    35941 ttcggaagag acgccggacg ccgcacgcgt gatcccgaaa gccatcttcc tgacggcggt
    36001 atacggcggc gttatcttta tcgcggcgtc gttctttatg cagctgttct ttcccgatat
    36061 cagccgcttt aaagacccgg acgccgcact gcctgaaatt gcgctgtacg tcggcggcaa
    36121 gctcttccag tcgattttcc tctgcaccac gtttgtgaac acgttagcct ctggcctggc
    36181 ttcacatgcc agcgtgtcgc gtctgctgta tgtgatgggg cgtgacaatg tgtttccgga
    36241 gcgcgtgttt ggctatgtgc acccaaaatg gcggactccg gcactcaacg tcattatggt
    36301 cgggattgtc gcgttgtcgg cgctgttctt cgatttagtt accgccacag cgttaattaa
    36361 cttcggtgct ctggtggcgt ttaccttcgt gaatctgtcg gtgtttaatc atttctggcg
    36421 gcgtaaagga atgaataaaa gctggaagga tcacttccac tatttgctga tgccgctggt
    36481 tggcgcgctg acggtgggtg tgctgtgggt taacctcgag tcaacgtcac tgacactcgg
    36541 tctggtatgg gcttcgttag gcggcgcata tttatggtat ctgatccgcc gctatcgcaa
    36601 agtgccgttg tatgatggtg acagaacgcc ggtgagtgaa acgtaatagt cggatgcgcg
    36661 gcgcattatc ctgcctgagg gtaacgcgcc gcgccattaa ctataaaaag atgtatgacc
    36721 cggatcacga gtgctatcat ccgcccttat gcttagcgca ttaaccccag gggcaaataa
    36781 tgaaccacga tatcccgcta aaatattttg atattgccga tgagtacgcg accgaatgcg
    36841 cagagcctgt cgcagacgct gaacgcacac cgctggccca ctacttccag ttactgctca
    36901 cccgtttgat gaacaatgaa gagatcagcg aagaagccca acatgaaatg gctgctgaag
    36961 cggggattaa tcccgtacgc attgatgaga tcgcagagtt tttgaatcaa tggggtaatg
    37021 agtaattatt taattgcaga cgatcggtca gtatcgttgt ccggataaag cgttcactct
    37081 gcatccggtt aaaatgacac gcattgcagc gtgctttaat gggtttctca cgatcgtacc
    37141 gctctgctcc tcgctaagtt gttctgtgag ttatagttat agagaaatca cgggtacgaa
    37201 tgttgaacag atggcgacgc catctgttca acgaccaacc acacggccct cattacgacc
    37261 cctgaacaca aacggtaatg gcaaatgtca ttaaatatta gtaagatagc ctctttacat
    37321 aaaatccctt aatattatgc gccaggtatt atcgtctctt ttggtgattg ctggacttgt
    37381 gagtggtcag gcaatcgccg cgcctgaatc tcccccgcat gctgatatcc gcgacagcgg
    37441 ttttgtctat tgcgtcagcg ggcaagtcaa cacctttaac ccatccaaag cgagcagtgg
    37501 gttaattgtc gatacccttg ccgcccagtt ttatgatcga ctgctggatg tcgatcccta
    37561 tacctatcgc ctgatgccgg aacttgccga aagctgggaa gtactcgaca acggcgcgac
    37621 ctatcgcttc cacctgcgtc gcgatgttcc gtttcaaaaa accgactggt ttactcccac
    37681 tcgtaaaatg aatgccgacg atgtggtgtt taccttccag cgaatttttg accgcaacaa
    37741 cccgtggcat aacgtcaacg gcagcaactt cccctacttc gacagcctgc aatttgccga
    37801 taacgtgaaa agcgtccgca aactggataa tcataccgtt gagttccgac tcgcccagcc
    37861 ggatgcttct tttttgtggc acctcgcaac ccattatgct tcggtcatgt cggcagaata
    37921 tgcccggaag ttagagaaag aagatcgcca ggagcaactc gaccgtcaac cggtcggcac
    37981 cggtccgtat cagttgtcgg aataccgcgc cgggcaattt attcgcctac aacgtcatga
    38041 tgacttctgg cgcggtaaac cgttaatgcc gcaggtagtg gtggatttag gctccggcgg
    38101 caccggacgt ctgtcgaaac tcctgaccgg ggaatgcgac gttctggcct ggcctgctgc
    38161 cagccagcta tccattttgc gtgacgaccc gcgcttgcgt ttaacgctgc gtcctgggat
    38221 gaacgtcgcc tatctggcat ttaacaccgc caaaccgccg ctaaataatc ccgctgtccg
    38281 ccatgcgctg gcactggcga ttaataacca gcgcctgatg caatccatct attatggtac
    38341 ggctgaaacg gcggcctcta ttttaccgcg cgcctcgtgg gcctatgaca acgaggctaa
    38401 aattactgaa tacaatccgg cgaaatcgcg cgaacagttg aagtcgttgg ggctggaaaa
    38461 tttaacgctg aaactgtggg tgcccacacg ttcgcaggcg tggaacccca gtccactgaa
    38521 aactgccgaa ctgattcagg cggatatggc gcaggttggc gtaaaagtgg tgattgtgcc
    38581 ggtagaaggt cgctttcagg aggcgcggtt gatggatatg agccatgatc tgacgttatc
    38641 cggttgggcg acggacagta acgacccgga cagtttcttc cgtccgttac tgagctgcgc
    38701 ggcaattcat tcgcagacca acctcgccca ctggtgcgat ccgaaattcg acagcgtatt
    38761 gcgtaaggcg ctctcttcgc agcagctggc ggcgcgtatt gaagcctatg acgaagcgca
    38821 aagtattctg gcgcaggaat tgcccatttt gccgctggcg tcgtcattgc gtttgcaggc
    38881 ctatcggtac gatatcaaag gtctggtact tagcccgttt ggtaacgcct cctttgctgg
    38941 ggtgtatcgc gagaaacagg atgaggtgaa aaagccatga ttatcttcac cttacgccgc
    39001 attttgttat tgattgttac cttgttcctg ctgaccttcg ttggcttcag tttgagctat
    39061 ttcactccac acgcgccgtt acaaggcgcg tcactgtgga atgcctgggt gttctggttt
    39121 aatggcctga tccactggga ttttggtgtt tccagcatta acggtcaacc aattgccgaa
    39181 cagttaaaag aggtcttccc ggcgacgatg gaactgtgca tcctcgcctt cggttttgcg
    39241 ctgattgttg gcatccccgt ggggatgatt gccgggatta cgcgccataa gtggcaggat
    39301 aacttgatca acgccatcgc cttgctgggc ttttcaatcc cggtgttctg gctggcgctt
    39361 ctgttgacgc tgttttgttc actcacgcta ggttggttgc ccgtttcagg gcgtttcgat
    39421 ctgctctacg aagtgaaacc gattaccggt tttgcgttga ttgatgcctg gctttcggac
    39481 tcaccatggc gggatgaaat gatcatgagc gcaatccgcc atatgatatt gcccgtgatc
    39541 accctgtcgg ttgcgccaac aactgaagtg atccgcctga tgcgtatcag cactatcgaa
    39601 gtgtatgacc agaactatgt aaaagcggcg gcgacccgcg gtttgtcgcg ctttactatt
    39661 ttgcgtcgcc acgttctgca taacgcgtta ccgccggtta ttcctcgcct gggcttacag
    39721 ttttccacca tgctgacgct ggcgatgatc accgaaatgg tttttagctg gccgggttta
    39781 gggcgctggt taattaacgc catccgccag caggattacg cagccatttc cgccggagtg
    39841 atggtgtgtg gctcactggt cattattgtt aacgtgattt ctgatatttt gggtgccatg
    39901 gctaaccctc tgaaacataa ggaatggtat gccttacgat agcgtataca gcgaaaagcg
    39961 cccgccgggc acgctgcgta ccgcctggcg caaattttat agtgacgcct ctgcgatggt
    40021 cggcctgtac ggctgcgcgg ggctggctgt actgtgtatt tttggcggct ggtttgcgcc
    40081 ttacggcatc gaccagcaat ttctcggtta ccaattattg ccgccgtcat ggtcgcgcta
    40141 tggcgaagtt tctttcttcc tggggactga cgacctcgga cgcgatgttt taagtcgttt
    40201 actgagcgga gctgcgccaa ccgtgggtgg cgcatttgtg gtgacgcttg ccgcgacgat
    40261 ctgtggcctg gtactgggca ccttcgccgg ggcgacgcac ggcctccgct cagcggtgct
    40321 taaccatatt ctggatacct tactggcgat cccttcgctg ctgctggcaa ttatcgttgt
    40381 agcgtttgcc ggaccgagtt tgtctcacgc catgtttgcc gtctggctgg cgctgctgcc
    40441 gcgtatggta cgttcgattt acagcatggt gcatgacgaa ctggaaaaag agtacgttat
    40501 cgccgcccgt ctggatggcg catcaacgct gaatattctc tggtttgctg tgatgcctaa
    40561 catcaccgcc gggctggtca cggagatcac ccgcgcactg tcgatggcaa ttctcgatat
    40621 cgccgcgctg ggctttctcg atctcggcgc acaactcccc tcgcctgaat ggggagcgat
    40681 gctcggtgat gcgctggaac tgatttatgt cgccccgtgg actgtcatgc tgccaggtgc
    40741 ggcaattatg attagcgtgt tgttggttaa cctccttggc gatggcgttc gtcgtgcgat
    40801 tattgcgggg gtggaataat gccattactc gatattcgta acctgaccat tgaatttaaa
    40861 accggtgatg agtgggttaa agccgtcgac cgggtaagta tgaccttaac cgaaggtgaa
    40921 atccgcggtc ttgttggtga atccggttcc ggcaagagtt tgattgcgaa agcgatttgt
    40981 ggggtgaata aagataactg gcgtgttact gctgaccgta tgcgttttga tgatatcgat
    41041 ttgctgcgtc tctccgcacg cgaacggcgc aaactggttg gccataacgt gtcgatgatt
    41101 ttccaggaac cgcagtcgtg tcttgaccct tcagaacgtg tgggtcgcca gttgatgcaa
    41161 aacatcccag cctggaccta taaaggccgt tggtggcagc gttttggctg gcgcaaacgc
    41221 cgtgccattg aactgctgca ccgcgtgggg attaaagatc acaaagatgc gatgcgcagt
    41281 tttccctatg agttgaccga aggtgaatgt cagaaagtga tgatagccat tgcactggcg
    41341 aatcaaccgc gtctgctgat tgctgacgaa ccgaccaact caatggagcc aacaacccag
    41401 gcgcaaatct ttcgcctgct gacgcgtctc aaccaaaaca gcaataccac tattttgctt
    41461 atcagccatg acttacaaat gcttagccaa tgggcggata aaattaacgt gctttactgc
    41521 ggtcaaacag tggaaaccgc gccgagtaag gagttggtga cgatgccaca tcatccttat
    41581 acccaggcgc tgatccgcgc gataccagac ttcggcagcg cgatgccgca taaaagtcgc
    41641 ctcaatacgc tgcccggcgc tatcccactg ctggaacagt taccgattgg ttgtcgtctg
    41701 gggccacgtt gcccgtatgc acaacgagaa tgcattgtga cgccacgttt gacgggggcg
    41761 aaaaatcatc tctatgcctg tcatttcccg ctgaacatgg agaaagagtg agatgatcga
    41821 aacgctgctt gaagtgcgta atttaagtaa aacgttccgc taccggaccg gctggtttcg
    41881 tcgtcagacc gtagaagcgg taaaaccctt gagctttacg ctacgtgaag gccagacact
    41941 ggcgattatt ggcgagaatg gttcgggtaa atccacgctg gcaaaaatgc tggcgggaat
    42001 gatagagcct accagcggcg agttattgat tgacgatcat ccactgcatt ttggcgatta
    42061 ttccttccgc agtcagcgta ttcgcatgat ttttcaggat ccttcgacct cgttgaatcc
    42121 ccgtcaacgt atctcgcaaa ttctggattt tccactgcgc ctgaacaccg acctggaacc
    42181 ggaacagcgt cgcaaacaga ttattgaaac gatgcgtatg gttgggctgc taccggatca
    42241 cgtcagttac tatccgcata tgttggcacc cggacaaaaa cagcgtctgg gtctggcgcg
    42301 cgcgctgata ttgcgcccaa aagtcattat tgccgatgaa gccctcgctt cactggatat
    42361 gtcgatgcgt tcgcagttga ttaatctgat gctggagtta caggaaaaac agggcatttc
    42421 gtatatttat gttacccagc atatcggaat gatgaagcac attagcgacc aggtgctggt
    42481 gatgcatcag ggcgaggttg tcgagcgagg cagcaccgcg gatgtgctgg catcgccgct
    42541 gcatgaactc accaaacggc tgattgccgg gcactttggc gaagcattga cggcggatgc
    42601 gtggcgtaaa gatcgctaat tttctgaatc ctgcttccag attatccacc tcattctgac
    42661 aagagattaa atcttgtcag aatgaggtga tggataaaat aaaatcaaat gcgcgtgatt
    42721 taagacgcaa tctcactttg caggaacgaa agctctggcg atatcttcgc agccgacgtt
    42781 ttggtgattt caaatttcgc cgtcaacatc cggtggggag ctacattctc gattttgctt
    42841 gctgctcggc gcgcgtagtc gttgagctgg atggtgggca gcatgagttg gcagttgcct
    42901 atgataccag gcgcactagc tggcttgagt cgcagggctg gaccgtgctg cgtttctggc
    42961 ataacgagat tgattgtaat gaggaggcgg tgctggagat tattctgcag gaactgaacc
    43021 gccgatcacc ctcaccctga aagggcgagg gggccgaccg agccgaatag ctgttgtggt
    43081 gaaaacatgg agacagtgct ggagaatatt cggcaaggtc tgaaccatcc cagccatcgc
    43141 cataaaaggg ttaggggctg tatgagcctg tttgttgctg gggtaacaat atttgcacaa
    43201 tatggtcccc tcgcccctct ggggagaggg ttagggtaag gggaaaagcg cccaccctgc
    43261 cgcagcatgc tccggtcgga cctggcaact atagctactc acagccaggt tgattataat
    43321 aaccgtttat ctgttcgtac tgtttactaa aacgacgaat cgcctgattt tcaggcacaa
    43381 caagcatcaa caataaggat taaagctatg ggttttcttt ccggtaagcg cattctggta
    43441 accggtgttg ccagcaaact atccatcgcc tacggtatcg ctcaggcgat gcaccgcgaa
    43501 ggagctgaac tggcattcac ctaccagaac gacaaactga aaggccgcgt agaagaattt
    43561 gccgctcaat tgggttctga catcgttctg cagtgcgatg ttgcagaaga tgccagcatc
    43621 gacaccatgt tcgctgaact ggggaaagtt tggccgaaat ttgacggttt cgtacactct
    43681 attggttttg cacctggcga tcagctggat ggtgactatg ttaacgccgt tacccgtgaa
    43741 ggcttcaaaa ttgcccacga catcagctcc tacagcttcg ttgcaatggc aaaagcttgc
    43801 cgctccatgc tgaatccggg ttctgccctg ctgacccttt cctaccttgg cgctgagcgc
    43861 gctatcccga actacaacgt tatgggtctg gcaaaagcgt ctctggaagc gaacgtgcgc
    43921 tatatggcga acgcgatggg tccggaaggt gtgcgtgtta acgccatctc tgctggtccg
    43981 atccgtactc tggcggcctc cggtatcaaa gacttccgca aaatgctggc tcattgcgaa
    44041 gccgttaccc cgattcgccg taccgttact attgaagatg tgggtaactc cgcggcattc
    44101 ctgtgctccg atctctctgc cggtatctcc ggtgaagtgg tccacgttga cggcggtttc
    44161 agcatcgctg caatgaacga actcgaattg aaataatcat tctgttggta aatattgggc
    44221 ggcgttctgc cgcccgttat ctctgttata cctttctgat atttgttatc gccgatccgt
    44281 ctttctcccc ttcccgcctt gcgtcaggat aacgatttcc tttacgacca aggagcgccc
    44341 atggaacaac gccacatcac cggcaaaagc cactggtatc atgaaacgca atccagtact
    44401 gcggagtatg acgttctgcc tctggtcccg gaagccgcaa aggtcagcga tccctttctg
    44461 ctcgacgtga tccttgatga agaaacgctg gctcccttcc tttcatggct ggtccctgcg
    44521 cgcgttcttg cagtggaatt gttccctgac cagcttaccg tgacccgttc acagaccttc
    44581 accgcttatg aacgcttgtc tacggccctg acggttgctc aggtttgcgg cgtccagcgg
    44641 ttatgtaact actattcggc gcgacttacg ccgctccccg ggcctgattc ctccagggaa
    44701 agcaatcata ggttggcaca aatcacgcaa tatgcccgcc aactggctag ctcgccttct
    44761 attatcgaca accgatcgcg ccagcatctg aatgacgtcg gtcttactgc cggggactgt
    44821 gtgatcatta accaaatcat tggttttatt ggctttcagg cgcggaccat tgcgacattt
    44881 caggcttatc tcgggcaccc ggtacgctgg ttacccggtc tggaaataca aaactacgcc
    44941 gacgcgtcac tgtttgctga tgaatcaata cgctggcgaa gcagctatga ggtggaaaaa
    45001 ctacctgaag agtacacaaa aagttcaaca gcagaacttt gccaactggc cgaaacactc
    45061 tctctccacc ctatttcact ttcccttctc gaaaggttgt taaacagtac acgggttaat
    45121 acacagccgg ataataagct tgcggcgttg ttatgcgcgc ggataaatgg cagtcctgct
    45181 tgttttgccg cctgtatgga ttcatcaaat gaatataaaa aaatcagccc ccttctgcgc
    45241 aagggcgaaa atgaaattaa ccaatgggct gaccgtcatt ctgttgagca cgctaccgtt
    45301 caggcgatac aatggctgac ccgagcaccc gatcgcttta gcgccgccca gttcagccct
    45361 ttactcgaac acgaaaaatc atcaacgcag attattaatc tgctggtatg gagcgggctg
    45421 tgtggctgga taaatcgctt aaaaatcgcg ttgggtgaga catattaacc ttgccgcgtc
    45481 agacagattc gcgtaaaact gtcagccgct ctaatggcca ccaaaataga caattatgtt
    45541 tcaggacaac ccgctgctag cgcagcttaa acagcaactg cattcccaga cgccacgcgc
    45601 tgaaggggtg gtaaaagcca cagaaaaagg ctttggcttc ctggaagtcg acgcgcaaaa
    45661 aagttatttc attccgccgc cgcagatgaa aaaagtcatg catggcgacc gaattatcgc
    45721 ggtgatccac agtgaaaaag aacgtgaatc cgcagagcca gaagaactgg ttgaaccgtt
    45781 cctgactcgt ttcgtgggta aagttcaggg caaaaatgac cgtctggcca tcgttcctga
    45841 tcatccactc ttaaaagacg ccattccttg ccgcgcagcc cgtggcctga accacgagtt
    45901 taaagaaggc gactgggcgg ttgccgaaat gcgccgtcat ccgctgaaag gcgatcgttc
    45961 tttctatgct gaactgacac aatacatcac ttttggtgac gaccactttg taccgtggtg
    46021 ggttaccctt gcgcgccata atctggaaaa agaagcacca gacggcgtcg ctaccgaaat
    46081 gctcgatgaa ggtctggttc gtgaagatct gaccgcgctg gattttgtca ccatcgacag
    46141 tgccagcaca gaagatatgg atgacgccct tttcgctaag gcgttgccgg atgacaaact
    46201 tcagctgatt gtggcgattg ccgatccaac cgcgtggatt gctgaaggca gcaagctgga
    46261 caaagccgcg aaaattcgcg cattcaccaa ctatctgcct ggcttcaaca tccctatgct
    46321 gcctcgcgag ctttctgacg atctctgctc actgcgcgcc aatgaagtcc gcccggtact
    46381 ggcatgccgc atgacgctct ccgctgatgg caccattgaa gataatatcg aattctttgc
    46441 cgccaccatc gaatccaaag caaagctggt gtatgaccag gtttctgact ggctggaaaa
    46501 taccggtgac tggcagcctg aaagtgaagc aattgccgaa caagtccgtt tgctagcgca
    46561 aatttgccaa cgccgcggcg agtggcgtca taaccacgca ctggtgttta aagatcgccc
    46621 ggattaccgc tttattctcg gtgaaaaagg tgaagtgctg gatatcgtcg ccgagcctcg
    46681 tcgcattgcc aaccgtatcg tcgaagaagc gatgattgcc gctaacattt gtgcggcccg
    46741 cgtactgcgc gataagctcg gttttggcat ctataacgtg catatgggct ttgatccggc
    46801 gaatgccgac gcgctggcag cgttgctgaa aacgcacggt ctgcatgtcg atgccgaaga
    46861 agtgctcacg ctggacggtt tctgcaaact gcgtcgtgaa ctggacgcgc aaccaactgg
    46921 tttcctcgac agccgcattc gtcgcttcca gtcatttgct gaaattagca ctgaacccgg
    46981 tcctcacttt ggcctcggtc tggaagcata cgccacctgg acttcgccga tccgtaaata
    47041 tggcgacatg atcaaccacc gtctgctgaa agcggttatc aaaggcgaaa ctgcgacgcg
    47101 cccacaggat gaaatcactg tccaaatggc cgagcgtcgc cgtctcaacc ggatggcaga
    47161 acgtgatgtt ggcgactggt tatacgcacg cttcctgaaa gacaaagccg ggaccgacac
    47221 ccgtttcgcg gcggaaattg tcgatatcag ccgtggcggc atgcgtgtgc gtttggttga
    47281 taacggcgct atcgccttta ttccggcacc tttcttacac gctatgcgcg atgaactggt
    47341 ttgcagccag gaaaacggca ctgtacaaat taaaggtgaa acggtttaca aagtaactga
    47401 cgttattgac gtcaccattg ccgaagtccg catggaaacc cgcagcatta ttgcgcgccc
    47461 ggtcgcgtaa tctcctttca cggcccattc ctcatggatg ggccgtttat ttccccgctc
    47521 taccttcgtt atatccaggc agatttttta actgactttc gtttgaaaac tggcgttttt
    47581 ccaaaactgg attacaaata aatatataaa aaaaacaatg cgtttagccg ccgttaattt
    47641 catgtaagtc atgttgttcc ttttatttaa ccgcggactc cgcagttaac cggaggatat
    47701 gcatcatgaa aaccgttagg gagtccacaa cgttgtacaa ctttctcgga tcgcacaatc
    47761 catactggcg gttgacggaa agcagcgatg ttttgcgctt ttctaccacc gaaaccacag
    47821 aacctgatcg tactttgcag ttatctgccg aacaggctgc tcgcatcagg gaaatgacgg
    47881 tcatcacctc cagcctgatg atgagtctga ccgtcgatga gagcgatctt tctgtgcatc
    47941 tggtaggacg aaaaatcaat aaacgggaat gggctggcaa cgcgtctgca tggcatgaca
    48001 caccggcagt tgctcgtgat ttatcacacg ggctttcctt tgctgagcag gtagtttctg
    48061 aagcacattc cgcaatagtg attctcgaca gccgggggaa tatccaacgc ttcaatcggt
    48121 tatgtgaaga ttacactggg ttgaaagaac acgacgtcat tggccaaagc gtgtttaaac
    48181 tgtttatgag ccgtcgtgaa gctgcagcat ccaggcgcaa taaccgtgta ttttttcgaa
    48241 gcggcaatgc atatgaagtc gaactgtgga taccaacacg taaaggccag cggctgtttc
    48301 tgtttcgcaa taaatttgtc cacagcggca gtggcaaaaa cgagattttt ttaatctgtt
    48361 ccggcaccga cattaccgaa gagcgccgcg ctcaggagcg actgcgtatt ctggcaaata
    48421 ccgacagtat caccggactg ccgaatcgta acgcaatgca ggatttaatc gatcacgcta
    48481 ttaatcatgc agataacaat aaagttgggg ttgtgtatct tgatttggat aatttcaaaa
    48541 aggtcaacga cgcctatggg catttgtttg gtgaccagtt attacgcgac gtgtcattgg
    48601 ctattttaag ctgtctcgaa catgaccagg tgttggcgcg tccaggtggg gatgagtttc
    48661 tggtactggc atccaacacc tcacaaagcg cgctggaagc aatggcatca cgaattttga
    48721 cccgcttacg gctccccttt cgcattggtt taattgaagt ttataccagc tgttcagtag
    48781 gtattgcact ctctcccgaa catggttcag acagcacggc tattattcgt cacgccgaca
    48841 cagcaatgta cacagcgaag gaaggcggac gaggacaatt ttgcgttttt accccagaaa
    48901 tgaatcaacg ggtatttgaa tatctctggc tggataccaa cttgcgtaaa gcactggaaa
    48961 acgatcagtt ggttattcac tatcaaccga aaatcacctg gcgtggcgaa gtgcgcagtc
    49021 tggaagcact agtacgttgg cagtcacctg aacgtgggtt gattccaccg ttggacttca
    49081 tttcctacgc cgaagagtca gggctaattg tgcctttagg ccgttgggtg attctcgatg
    49141 tcgtacgcca ggtggcaaag tggcgggata aaggcataaa cctgcgagtg gcggtaaata
    49201 tttctgcacg tcagctcgcc gatcaaacca ttttcaccgc cctgaaacag gttctccagg
    49261 aactcaattt tgaatactgc cctatagatg ttgaactgac agagagttgt ctgattgaga
    49321 atgatgaact ggcactgtct gttattcaac aatttagcca actaggtgcg caagtgcatc
    49381 tggatgattt tggtaccggc tactcttcac tttcgcaact ggcgcgcttt ccgatcgatg
    49441 ccatcaaact tgaccaggtt tttgttcgag atattcacaa acaacctgtc tcgcagtcac
    49501 tggtccgggc gatcgtcgct gtggcccagg cattgaatct tcaggtgatc gccgaaggtg
    49561 tagagagtgc aaaggaagat gcttttttaa ccaagaacgg gatcaatgag cggcaaggat
    49621 ttttgtttgc caaaccgatg cccgccgtcg ccttcgaacg ctggtataaa cgctatctga
    49681 agcgcgcata agtagatgaa tatatatact tagcgctata tcccgtcatt atatatcgta
    49741 ttcctggatg ataattagcc gttgctgtta aacacttctc ttttagcggc aatttttgca
    49801 ttattcattt tccacttttg ctataaggat gtccttgatg tctgaatttg atgcccagcg
    49861 cgttgccgaa cgtattgata ttgtgttaga tatccttgtg gcaggcgatt accactctgc
    49921 gatccataat ctcgagatac ttaaagcaga actcttgcgc caggttgctg aatctacgcc
    49981 agacatcccg aaggcaccgt gggagattta acaatcgtgc cttcaggttt tcctatttga
    50041 ggatgcccgg cgcgtcagta tttttttatt tagtattata acgttataag aattacagcg
    50101 atgaattccc gacaacaaac tattctacag atggtcattg accagggtca ggttagcgta
    50161 accgatctgg caaaagccac tggagtttct gaagttacca ttcgccagga tctcaacacc
    50221 ctcgaaaaac tgagttacct ccgccgtgca catggctttg cagtttcgct tgatagtgat
    50281 gacgtcgaaa cccgtatgat gagcaactat acgctgaagc gtgaactcgc cgagtttgcc
    50341 gcgtcactgg ttcaaccggg cgaaaccatc tttatcgaaa atggtagcag caatgccctg
    50401 ctcgcccgga ctctggggga gcagaagaaa aatgtcacta tcatcacggt cagcagctac
    50461 atcgcgcatt tgctgaaaga cgcgccttgt gaagtcattt tgctcggtgg cgtgtaccag
    50521 aaaaaaagcg aaagtatggt tggcccgttg acacgccagt gcatccagca ggtgcatttc
    50581 agcaaagcat ttattggtat tgatggctgg caacctgaaa ttggattcac cggtcgcgat
    50641 atgatgcgta ccgatgtggt caatgccgtg ctggaaaaag agtgcgaagc gatagtcctg
    50701 actgacagct cgaaatttgg tgctgtacat tcatactcca tcggtcccgt tgagcgattc
    50761 aatcgcgtga ttaccgattc gaaaatacgc gccagcgatc tgatgcatct tgagcacagt
    50821 aaactcaccg ttcacgtcgt tgacatttaa ccatttccct tctctacgga tgatttgcag
    50881 tttggcaaat catccgctct aagatgattc ctggttgata attaa
//
LOCUS       DAPGWB010000014        48341 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.014, whole genome shotgun sequence.
ACCESSION   DAPGWB010000014 DAPGWB010000000
VERSION     DAPGWB010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 48341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48341
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.014"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            168..1385
                     /gene="alaA"
                     /locus_tag="RHX79_000825"
     CDS             168..1385
                     /gene="alaA"
                     /locus_tag="RHX79_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase AlaA"
                     /protein_id="HDV2196030.1"
                     /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA
                     PFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN
                     GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
                     IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDA
                     EHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRL
                     CANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM
                     FPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSL
                     SKFARFLSGYHQL"
     gene            1469..2068
                     /gene="yfbR"
                     /locus_tag="RHX79_000826"
     CDS             1469..2068
                     /gene="yfbR"
                     /locus_tag="RHX79_000826"
                     /EC_number="3.1.3.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-deoxynucleotidase"
                     /protein_id="HDV2196031.1"
                     /translation="MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHAL
                     AAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQ
                     KLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAK
                     TRLEATLEARRSQEMDYFMEVFVPSFHLSLDEISQDSPL"
     gene            complement(2127..3959)
                     /locus_tag="RHX79_000827"
     CDS             complement(2127..3959)
                     /locus_tag="RHX79_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDV2196032.1"
                     /translation="MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLT
                     VPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTV
                     AGLGAFMSSTGVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
                     VNSELLREGYHGFSFFSVTPIGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFR
                     DLIREYRLTGRARRLAIRPGSPMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVN
                     GVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPE
                     SELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGML
                     AKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLM
                     GKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMM
                     LGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPV
                     SSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF"
     gene            complement(4046..4696)
                     /gene="hxpA"
                     /locus_tag="RHX79_000828"
     CDS             complement(4046..4696)
                     /gene="hxpA"
                     /locus_tag="RHX79_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpA"
                     /protein_id="HDV2196033.1"
                     /translation="MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIH
                     GKQAITSLRHFMAGKSEADIAAEFTRLEHIEATETEGITALPGAIALLNHLNKAGIPW
                     AIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV
                     VEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ"
     gene            complement(4707..5201)
                     /locus_tag="RHX79_000829"
     CDS             complement(4707..5201)
                     /locus_tag="RHX79_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007371080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbU family protein"
                     /protein_id="HDV2196034.1"
                     /translation="MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQM
                     RELDREFGELKEETCRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEAR
                     YLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQ
                     IINA"
     gene            complement(5284..5739)
                     /locus_tag="RHX79_000830"
     CDS             complement(5284..5739)
                     /locus_tag="RHX79_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HDV2196035.1"
                     /translation="MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMT
                     RYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAI
                     LNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL"
     gene            6077..7279
                     /gene="ackA"
                     /locus_tag="RHX79_000831"
     CDS             6077..7279
                     /gene="ackA"
                     /locus_tag="RHX79_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDV2196036.1"
                     /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARI
                     KWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS
                     VVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEE
                     SYLYALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS
                     AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGL
                     LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGI
                     GENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIA
                     QDASRLTA"
     gene            7354..9498
                     /gene="pta"
                     /locus_tag="RHX79_000832"
     CDS             7354..9498
                     /gene="pta"
                     /locus_tag="RHX79_000832"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDV2196037.1"
                     /translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPR
                     TGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDA
                     EVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFG
                     GAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVL
                     GAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSL
                     LVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNT
                     NTWQTSLSLQSFNLEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAF
                     RYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGV
                     ELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDG
                     LVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQL
                     AEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGP
                     LQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQG
                     MRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ"
     gene            9688..11208
                     /gene="yfcC"
                     /locus_tag="RHX79_000833"
     CDS             9688..11208
                     /gene="yfcC"
                     /locus_tag="RHX79_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative basic amino acid antiporter YfcC"
                     /protein_id="HDV2196038.1"
                     /translation="MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQ
                     EVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTS
                     GSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSL
                     GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQ
                     GIAGVPVLSGSGLRIVVWVIATLIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQAD
                     VEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRL
                     NGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAI
                     SGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFG
                     DGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSSVVVIGAQLMGYH"
     gene            complement(11241..11783)
                     /gene="yfcD"
                     /locus_tag="RHX79_000834"
     CDS             complement(11241..11783)
                     /gene="yfcD"
                     /locus_tag="RHX79_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase YfcD"
                     /protein_id="HDV2196039.1"
                     /translation="MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVV
                     HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE
                     HGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKA
                     LALWMKRNAKNEAVETETAE"
     gene            complement(11841..12392)
                     /gene="yfcE"
                     /locus_tag="RHX79_000835"
     CDS             complement(11841..12392)
                     /gene="yfcE"
                     /locus_tag="RHX79_000835"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HDV2196040.1"
                     /translation="MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRN
                     ALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFL
                     THGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGML
                     DNDVLSVIALNDQSIIAQVAINP"
     gene            complement(12448..13092)
                     /gene="yfcF"
                     /locus_tag="RHX79_000836"
     CDS             complement(12448..13092)
                     /gene="yfcF"
                     /locus_tag="RHX79_000836"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase"
                     /protein_id="HDV2196041.1"
                     /translation="MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGE
                     HLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARA
                     RQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLVLGQPNL
                     FGEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG"
     gene            13228..13875
                     /gene="yfcG"
                     /locus_tag="RHX79_000837"
     CDS             13228..13875
                     /gene="yfcG"
                     /locus_tag="RHX79_000837"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GSH-dependent disulfide bond oxidoreductase"
                     /protein_id="HDV2196042.1"
                     /translation="MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFL
                     RISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLF
                     WQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS
                     IADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS"
     gene            13932..14294
                     /gene="folX"
                     /locus_tag="RHX79_000838"
     CDS             13932..14294
                     /gene="folX"
                     /locus_tag="RHX79_000838"
                     /EC_number="5.1.99.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate 2'-epimerase"
                     /protein_id="HDV2196043.1"
                     /translation="MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADK
                     ARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDK
                     LHALRYADSVSMTLSWQR"
     gene            14315..15208
                     /locus_tag="RHX79_000839"
     CDS             14315..15208
                     /locus_tag="RHX79_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HDV2196044.1"
                     /translation="MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPR
                     VTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS
                     DTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCL
                     LRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRG
                     PFNMVSPYPIRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRL
                     EEAGFAFRWYDLEEALADVVR"
     gene            complement(15256..16158)
                     /gene="rpnB"
                     /locus_tag="RHX79_000840"
     CDS             complement(15256..16158)
                     /gene="rpnB"
                     /locus_tag="RHX79_000840"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnB"
                     /protein_id="HDV2196045.1"
                     /translation="MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTT
                     LKLEPNSFIDDDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAA
                     MQNHLDAGYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDIT
                     VVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQ
                     TGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGRNDGLILGKREEALRIAQEMLD
                     RGLDRELVMMVTRLSPDDLIAQSH"
     gene            complement(16355..17128)
                     /gene="hisP"
                     /locus_tag="RHX79_000841"
     CDS             complement(16355..17128)
                     /gene="hisP"
                     /locus_tag="RHX79_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter ATP-binding protein
                     HisP"
                     /protein_id="HDV2196046.1"
                     /translation="MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGK
                     STFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN
                     LWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR
                     VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV
                     STHVIFLHQGKIEEEGAPEQLFGNPQSPRLQQFLKGSLK"
     gene            complement(17136..17852)
                     /locus_tag="RHX79_000842"
     CDS             complement(17136..17852)
                     /locus_tag="RHX79_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2196047.1"
                     /translation="MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFL
                     AIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGL
                     NCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIAL
                     PAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLI
                     SLFRRAEKRWLQHVKPSSTH"
     gene            complement(17849..18535)
                     /gene="hisQ"
                     /locus_tag="RHX79_000843"
     CDS             complement(17849..18535)
                     /gene="hisQ"
                     /locus_tag="RHX79_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012124147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter permease HisQ"
                     /protein_id="HDV2196048.1"
                     /translation="MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRL
                     SGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGF
                     IYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV
                     ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERR
                     YSVGVKRADL"
     gene            complement(18625..19407)
                     /gene="hisJ"
                     /locus_tag="RHX79_000844"
     CDS             complement(18625..19407)
                     /gene="hisJ"
                     /locus_tag="RHX79_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter substrate-binding
                     protein HisJ"
                     /protein_id="HDV2196049.1"
                     /translation="MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNS
                     QGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE
                     IAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIV
                     SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTG
                     MGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG"
     gene            complement(19628..20410)
                     /gene="argT"
                     /locus_tag="RHX79_000845"
     CDS             complement(19628..20410)
                     /gene="argT"
                     /locus_tag="RHX79_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine/arginine/ornithine ABC transporter
                     substrate-binding protein ArgT"
                     /protein_id="HDV2196050.1"
                     /translation="MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDA
                     KGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE
                     IAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVV
                     AYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTG
                     VGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD"
     gene            complement(20676..21245)
                     /gene="ubiX"
                     /locus_tag="RHX79_000846"
     CDS             complement(20676..21245)
                     /gene="ubiX"
                     /locus_tag="RHX79_000846"
                     /EC_number="2.5.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin prenyltransferase UbiX"
                     /protein_id="HDV2196051.1"
                     /translation="MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTL
                     SLETDFSLREVQALADVTHDARDISASISSGSFQTLGMVILPCSIKTLSGIVHSYTDG
                     LLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
                     DVINQTVNRVLDQFAITLPEDLFARWQGA"
     gene            complement(21340..22857)
                     /gene="purF"
                     /locus_tag="RHX79_000847"
     CDS             complement(21340..22857)
                     /gene="purF"
                     /locus_tag="RHX79_000847"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDV2196052.1"
                     /translation="MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR
                     LRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN
                     GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAAT
                     NRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLG
                     FDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR
                     VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT
                     FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY
                     LASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE
                     NPDIQQFECSVFNGVYVTKDVDQGYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG"
     gene            complement(22894..23382)
                     /gene="cvpA"
                     /locus_tag="RHX79_000848"
     CDS             complement(22894..23382)
                     /gene="cvpA"
                     /locus_tag="RHX79_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin V production protein"
                     /protein_id="HDV2196053.1"
                     /translation="MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHY
                     YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGV
                     CFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLP
                     RA"
     gene            complement(23641..24303)
                     /gene="dedD"
                     /locus_tag="RHX79_000849"
     CDS             complement(23641..24303)
                     /gene="dedD"
                     /locus_tag="RHX79_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416817.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DedD"
                     /protein_id="HDV2196054.1"
                     /translation="MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLV
                     PKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPA
                     PVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEI
                     VGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYT
                     PN"
     gene            complement(24293..25561)
                     /gene="folC"
                     /locus_tag="RHX79_000850"
     CDS             complement(24293..25561)
                     /gene="folC"
                     /locus_tag="RHX79_000850"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDV2196055.1"
                     /translation="MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGV
                     LKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPE
                     SAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVD
                     ADVAVVTSIALDHTDWLGPDRESIGREKAGIFRSAKPAIVGEPEMPSTIADVAQEKGA
                     LLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENA
                     IRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLH
                     DKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADA
                     KAEDTVLVCGSFHTVAHVMEVIDARRSGGK"
     gene            complement(25631..26545)
                     /gene="accD"
                     /locus_tag="RHX79_000851"
     CDS             complement(25631..26545)
                     /gene="accD"
                     /locus_tag="RHX79_000851"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HDV2196056.1"
                     /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE
                     VCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKET
                     GEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFS
                     ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI
                     AEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAK
                     LMNLPAPNPEAPREGVVVPPVPDQEPEA"
     gene            complement(26701..27360)
                     /locus_tag="RHX79_000852"
     CDS             complement(26701..27360)
                     /locus_tag="RHX79_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV2196057.1"
                     /translation="MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV
                     VTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFS
                     NPDSKIFRRSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
                     VIGALLWVLIFTYAGYFFGTLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAA
                     K"
     gene            complement(27443..28255)
                     /gene="truA"
                     /locus_tag="RHX79_000853"
     CDS             complement(27443..28255)
                     /gene="truA"
                     /locus_tag="RHX79_000853"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDV2196058.1"
                     /translation="MSDQQQLPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS
                     QVANEPITVFCAGRTDAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKA
                     VPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGEND
                     FTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHN
                     QPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD"
     gene            complement(28255..29268)
                     /locus_tag="RHX79_000854"
     CDS             complement(28255..29268)
                     /locus_tag="RHX79_000854"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDV2196059.1"
                     /translation="MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAG
                     EQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFAL
                     EPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLIS
                     ASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVD
                     EVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEE
                     NEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQE
                     YLY"
     gene            complement(29334..30470)
                     /gene="pdxB"
                     /locus_tag="RHX79_000855"
     CDS             complement(29334..30470)
                     /gene="pdxB"
                     /locus_tag="RHX79_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-phosphoerythronate dehydrogenase PdxB"
                     /protein_id="HDV2196060.1"
                     /translation="MKILVDENMPYARDLFSRLGEVTAVPGRPIPVAQLADADALMVR
                     SVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSS
                     LLMLAERDGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRS
                     LDELVQHADILTFHTPLFKDGPYKTLHLGDEKLIRSLKPGAILINACRGAVVDNTALL
                     TCLNEGQKLSVVLDVWEGEPELNVELLTKVDIGTPHIAGYTLEGKARGTTQVFEAYSK
                     FIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPG
                     EFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR"
     gene            30569..31564
                     /gene="flk"
                     /locus_tag="RHX79_000856"
     CDS             30569..31564
                     /gene="flk"
                     /locus_tag="RHX79_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulator Flk"
                     /protein_id="HDV2196061.1"
                     /translation="MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKV
                     TSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQ
                     LGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREAT
                     DRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWL
                     QARQTLSQQNTPTLESLQMALKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDIL
                     NQLYQRRVKGIDPRDMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR"
     gene            complement(31561..32739)
                     /locus_tag="RHX79_000857"
     CDS             complement(31561..32739)
                     /locus_tag="RHX79_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196062.1"
                     /translation="MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHH
                     DLGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAA
                     ILPVSAPFKFALLVIGRLILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGA
                     LAVGAPLGLLIHSHYGFAALAITTMVLPLLAWACNGTVRKVPALAGERPSLWSVVGFI
                     WKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMIGWMPDRF
                     GGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ
                     VRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG
                     "
     gene            complement(33023..34243)
                     /gene="fabB"
                     /locus_tag="RHX79_000858"
     CDS             complement(33023..34243)
                     /gene="fabB"
                     /locus_tag="RHX79_000858"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HDV2196063.1"
                     /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGM
                     RSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLI
                     AGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSIS
                     SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA
                     SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEG
                     AVRCMKMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHS
                     LGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGF
                     GGTNATLVMRKLKD"
     gene            34402..36408
                     /gene="mnmC"
                     /locus_tag="RHX79_000859"
     CDS             34402..36408
                     /gene="mnmC"
                     /locus_tag="RHX79_000859"
                     /EC_number="1.5.-.-"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDV2196064.1"
                     /translation="MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLG
                     GNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK
                     FPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINEL
                     TSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRR
                     GLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIAS
                     ALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFAR
                     RFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVA
                     TNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQ
                     QATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQ
                     NPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGV
                     RCATRDHLPMVGNVPDYEATLVEYASLAKQKDEAVSAPVFDDLFMFAALGSRGLCSAP
                     LCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG"
     gene            complement(36529..36807)
                     /locus_tag="RHX79_000860"
     CDS             complement(36529..36807)
                     /locus_tag="RHX79_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcL family protein"
                     /protein_id="HDV2196065.1"
                     /translation="MIAEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELES
                     GDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ"
     gene            complement(36841..37389)
                     /gene="epmC"
                     /locus_tag="RHX79_000861"
     CDS             complement(36841..37389)
                     /gene="epmC"
                     /locus_tag="RHX79_000861"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HDV2196066.1"
                     /translation="MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPADAEVPY
                     NRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQ
                     ALDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLANGIPERPARFIKA
                     LQNYYHTPELTAEQFPWPEALN"
     gene            complement(37389..38198)
                     /locus_tag="RHX79_000862"
     CDS             complement(37389..38198)
                     /locus_tag="RHX79_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDV2196067.1"
                     /translation="METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALM
                     AAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFIGSMSGALLVQ
                     YVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
                     PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVG
                     QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN"
     gene            complement(38198..39022)
                     /gene="mepA"
                     /locus_tag="RHX79_000863"
     CDS             complement(38198..39022)
                     /gene="mepA"
                     /locus_tag="RHX79_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HDV2196068.1"
                     /translation="MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGC
                     IVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPA
                     GGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEI
                     FSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPA
                     DSLECEDQPLPPPGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI"
     gene            complement(39026..40111)
                     /gene="aroC"
                     /locus_tag="RHX79_000864"
     CDS             complement(39026..40111)
                     /gene="aroC"
                     /locus_tag="RHX79_000864"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDV2196069.1"
                     /translation="MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHD
                     LDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVF
                     RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM
                     GDIPLEIKDWSQVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGL
                     GEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGI
                     LGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEA
                     MLAIVLMDHLLRQRAQNADVKTDIPRW"
     gene            complement(40146..41078)
                     /gene="prmB"
                     /locus_tag="RHX79_000865"
     CDS             complement(40146..41078)
                     /gene="prmB"
                     /locus_tag="RHX79_000865"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDV2196070.1"
                     /translation="MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDE
                     AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGH
                     EFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVD
                     AVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD
                     LPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDV
                     PFTWLEFDNGGDGVFMLTKEQLLAAREHFAIYKD"
     gene            41244..41795
                     /gene="smrB"
                     /locus_tag="RHX79_000866"
     CDS             41244..41795
                     /gene="smrB"
                     /locus_tag="RHX79_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HDV2196071.1"
                     /translation="MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPV
                     KRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHG
                     LTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
                     EYGGDAALLVLIEVEEWLPPELP"
     gene            complement(41918..42790)
                     /locus_tag="RHX79_000867"
     CDS             complement(41918..42790)
                     /locus_tag="RHX79_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2544 domain-containing protein"
                     /protein_id="HDV2196072.1"
                     /translation="MSISEMKKWTIIFASLMLLVLSVVGASKSYAGDKLMSASFDSVR
                     VYYAMDKVTGAVASSVFNVTVITPKEVAYGKYDSFAYKGDTLRVISWSGSGSAPTLVL
                     TDFDTINNSNCPGIDTKIFRCAYMTFKITVASDDYGCPWIASFYSYTDLPGFGSYTAP
                     TVHNTICPTIPVASYDISWSENYVSHNKVLRIQSTGSTVTTTLSTYLMEGGRLCDGSN
                     FSDNDGRGAYCRAVSELLTFTSYGCDKSTVTVTPTRHPVTDKVLHDIVVNVNTSSGQP
                     IDSTCRFQYVLNEL"
     gene            complement(42777..43301)
                     /locus_tag="RHX79_000868"
     CDS             complement(42777..43301)
                     /locus_tag="RHX79_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2196073.1"
                     /translation="MKKKRTLFFISSLMLLGSGTTIAGDNLHFTGNLISKSCTPVING
                     SQLAEVHFPAIAASDLMNLGQSERVPLVFQLKDCHSSTLFNVKVTLTGTEDSALPGFL
                     AFDSSSSASGAGIGIETAAGTSVPINNTTGVTLPLNQGNNSLNFNTWLQAKSGRDVTS
                     GDFSATVTATFEYF"
     gene            complement(43298..43768)
                     /locus_tag="RHX79_000869"
     CDS             complement(43298..43768)
                     /locus_tag="RHX79_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2196074.1"
                     /translation="MKRISLILLWGFCSMALSNVSFHGYLVQPPNCTISNAQTIEITF
                     QDVLIDDINGSNYEQTVSYSITCDTAVRDPLMEMTLSWSGTPSDFDNAAVSSNITGLG
                     IQLKQAGQSFTINTPLVVNETDLPVLTAVPVKKSGVVLPEADFEAWATLQVDYQ"
     gene            complement(43765..44313)
                     /locus_tag="RHX79_000870"
     CDS             complement(43765..44313)
                     /locus_tag="RHX79_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2196075.1"
                     /translation="MKSRAAKAEAGRASMKGSCSVWAVTGLLICCVGSGFAVAASKSV
                     SMNLRVLVDAPPPCTVNGAAVEFGNVFINKINGVDYKRPIDYSLVCNNLAMDDLRLQM
                     QATTVVINGETVISTGIPGFGIRVQKSSDHTILDLTSGSWLPFNFSSGVPVLEAVPVK
                     QSGTTLAAAEFNASATIVVDYQ"
     gene            complement(44288..45040)
                     /locus_tag="RHX79_000871"
     CDS             complement(44288..45040)
                     /locus_tag="RHX79_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HDV2196076.1"
                     /translation="MSDLLCSAKLGATTLALLLSAASLSAQASVTPDRTRLIFNESDK
                     SISVTLRNNDPKLPYLAQSWIEDEKGNKISSPLTVLPPVQRIDSMMNGQVKVQGMPDI
                     NKLPADRESLFYFNVREIPPKSNKANTLQIALQTRIKLFWRPKALENVSMKNPWQYKV
                     TLTRNGQEFTVNNPTPYYVIFSNASTQKNGNPAAGFSPIVMSPKTSAPLNVKMGSVPV
                     LTYVNDYGARMPLFFTCNGNSCQVDEEQSRKG"
     gene            complement(45060..47702)
                     /gene="yfcU"
                     /locus_tag="RHX79_000872"
     CDS             complement(45060..47702)
                     /gene="yfcU"
                     /locus_tag="RHX79_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher protein YfcU"
                     /protein_id="HDV2196077.1"
                     /translation="MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKG
                     DTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELV
                     AQFGLKEDVANNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWD
                     PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNY
                     QHTRSNDDDEFSGDETQKKWEWSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGG
                     SVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSV
                     SGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGA
                     EASWGIANGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGK
                     GSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYLDASDSGMVRTGNDKEM
                     YTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNMGSIRNVSISMTGYR
                     YEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGT
                     SDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMG
                     GTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNNYYRNQAYIDLNKLPENAEAT
                     QSVVQATLTEGAIGYRKFAVISGQKAMAVLRLQDGSHPPFGAEVKNDNEQTVGLVDDD
                     GNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPVVPDDI
                     KPVIQEQTQQVTPTNPPVSVSANQ"
     gene            complement(47784..>48341)
                     /locus_tag="RHX79_000873"
     CDS             complement(47784..>48341)
                     /locus_tag="RHX79_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDV2196078.1"
                     /translation="KFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCSIV
                     PDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQDCVFDTQETMTTTFTGTVSSANSG
                     NYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTSTNKGKAKQTLNFKA
                     WLVGAADAPDLGNFEANTTFQITYL"
BASE COUNT        11946 a        13040 c        11961 g        11394 t
ORIGIN      
        1 cacctcatta ttttgtcatt attaagttat taacagcaca atcgagcctt cccctctggc
       61 aaaatcttat tctgcagacc ttcaaaacac cgtcctgggg gagtacattg ttctaagctg
      121 acttccacgg cagggagtgg cgataacagc aaaaaaggtc aagattcatg tcccccattg
      181 aaaaatccag caaattagag aatgtctgtt atgacatccg tggtccggtg ctgaaagaag
      241 caaaacgcct ggaagaagaa ggtaacaagg tactgaaact gaacatcggc aacccagccc
      301 cgttcggttt tgacgcgcca gatgaaatcc tcgttgacgt gatacgcaac ctgcctaccg
      361 ctcaagggta ttgcgattcc aaaggtcttt actccgcgcg taaagccatc atgcagcact
      421 accaggctcg tggcatgcgt gatgttaccg tggaagatat ttacatcggc aatggtgtat
      481 cggagcttat cgttcaggca atgcaggcat tgctgaacag cggggacgaa atgttggttc
      541 ctgcaccaga ttacccacta tggaccgcgg cggtttcgct ttccagcggt aaagcggtgc
      601 attatctttg cgatgaatcc tctgactggt tcccggacct cgatgatatt cgcgctaaaa
      661 ttacgcctcg tacgcgtggg atcgttataa tcaacccaaa taacccaacc ggcgcggtat
      721 attccaaaga gcttttaatg gagattgtgg agattgcacg tcagcataat ctcattatct
      781 tcgccgatga aatttatgac aaaattcttt acgacgacgc tgagcatcac tcaattgcgc
      841 cgctggcacc tgacctgctg accattacct ttaacggact gtcgaaaacg taccgcgttg
      901 caggcttccg tcaggggtgg atggtgttga acgggccgaa aaaacacgcc aaaggctaca
      961 tcgaaggtct ggaaatgctg gcttcaatgc gcctgtgtgc taacgttcct gcgcaacacg
     1021 ccattcagac cgcgctgggt ggttatcaga gcatcagtga atttattacc cctggcggtc
     1081 gtctttatga gcagcgtaac cgcgcgtggg aactgatcaa cgatattccg ggcgtttcct
     1141 gcgtgaaacc tcgtggtgcg ctgtatatgt tcccgaaaat cgacgccaaa cgctttaaca
     1201 ttcacgacga tcagaaaatg gtgctggatt tcctgttgca ggaaaaagtt ctgttggtgc
     1261 aagggacggc attcaactgg ccgtggccgg atcacttccg cattgtcacg ctaccgcgtg
     1321 tcgatgatat cgagctgtct ttgagcaagt tcgcgcgttt cctttctggt tatcatcagc
     1381 tgtaatctta atttcactgc cggagattgc atccggcagc gttatcccgc cacaatgacc
     1441 tgatgatgtc atcatacgta aggtcactat gaaacagagc catttttttg cccatctctc
     1501 ccgcctgaaa ctcattaacc gctggccgct catgcgcaac gtgcggacgg aaaatgtgtc
     1561 cgaacacagt ttgcaggtag cgatggtcgc ccatgcgctg gcagctatca aaaatcggaa
     1621 atttggcggt aatgtcaacg ccgaacgtat cgctttactg gcgatgtacc acgatgcctc
     1681 agaagtgctc accggcgatc tccctactcc ggtgaaatac ttcaattcgc aaatcgctca
     1741 ggagtacaag gctattgaaa aaatcgctca gcaaaaactg gtcgatatgg ttccggaaga
     1801 gctgcgggat atctttgcgc cgttaattga cgagcatgca tatagcgatg aagaaaaatc
     1861 gctggtgaaa caggcagatg cactgtgtgc atatctgaaa tgtctggaag aactcgcggc
     1921 cggaaataat gaattcttgc tggcaaaaac gcgactggaa gcgacgcttg aagcgcgtcg
     1981 cagccaggag atggactact tcatggaagt atttgttccc agcttccatc tttcgctcga
     2041 tgagattagc caggattcac cgctgtaagc agccggagtc tgcgtcgcat caggcaataa
     2101 gcgccggatg cgacatcagg ctcttgtcaa aacggaaaca gcatcgggat catcaccaca
     2161 caaaccgcca tcacgataat ggtgaacggt acccccaact tcacaaagtc actgaagctg
     2221 taatttcccg gacctaaaac cagtgtgtta acaggtgaag aaaccggtgt cataaaggcg
     2281 gcggatgctg ccatcgccac gaccatcgcg aatggataag gcgacacccc catcgttttg
     2341 gcagcagcca gcgcaatcgg agccatcaac accgccgtcg cggtattaga gataaatagc
     2401 ccaataaccg ccgacaagac aaacaaacaa cccagcatca tatgtggccc gtaaccaccg
     2461 ccaatgtcca tcagcccttt caccgccagc gcgacacctc ccgttttctg taatgccaca
     2521 gcaaacggca tcatcccaac gatcaaaata atgctcggcc agtgaatgga tttataggcg
     2581 ctttcagcat ctatacagcg gaatttcccc atcagcaggc aggcgatgat agcggcaaca
     2641 ggattaggaa tttcatctgt cagcattaac gccaccatta gcaccagaca gaaaatggca
     2701 tggggtgcct ggctgtgcgc gggcgatgct tcactcacct cttccggtaa gttcagcgct
     2761 acgaagtcgc ggccctgttt ggccagcata ccgatcagtt tccagttacc cacaaccagg
     2821 atgatatcgc ccagcagcag aggctcatcc gccagcgaac cttccagcgc cacgccattg
     2881 cgctttagcc ccaccacatt cagtccgtag cgggtacgaa aaccaatttc gcgcaccgat
     2941 ttaccaatca gttctgactc aggaattaat gaaatctctg ccatgcccac atcaagggcc
     3001 tggtcagaaa aatactcgcc gcgcagtacc atcggctcca gcaattgctc actacaaaat
     3061 tgccggagat cgacatcagc cgcagacata tcaataagca aaacgtcacg cgcgcgaaat
     3121 tcagaaaccc cattaacgtt cacgataacg cgacgaaaac gccgccagcg ttcaacaccg
     3181 atgacgttag cgccataacg ctcacgtaat ttgagatcat ccagccgttg acctatcatt
     3241 ggcgatccgg ggcgaatagc cagacgtcgc gcacgcccgg tcagtcgata ttcacggata
     3301 agatcgcgaa aggttcgacg cgtccagcct tcgcgctgcg gggtctgggt atcccctttc
     3361 agcatgaaac gcatcactaa catatacaaa atacccagca ccagcacgac caggccaata
     3421 ggtgttacgc taaagaaact gaagccgtga tagccttcac gcagcaattc actgttgact
     3481 accaggttcg gcggcgtcgc caccagcgtc atcatgccgc taatcagccc ggcaaaactt
     3541 aacggcatca tcagacgtga cggcgaagtt tgcatacgca tggcaacgct taacaccacg
     3601 ggaataaaga tagcgacaac gccggttgaa ctcataaacg cgccaagccc cgcgacggtc
     3661 agcatcaaca aaaccaacat tttgatttca ctgttgcccg ccactttgac cagccatgtt
     3721 cccattacgg tggcaacacc ggtacggacc aaaccatcgc caataataaa caaggcggca
     3781 atcaggacaa cgttaggatc agaaaagccg gaaaatactt cggggaccgt cagcgttccg
     3841 cttaatgcaa acgcgacaat aacaaacaaa gcgaccgcat ccatacgcac tctgcccgtc
     3901 gcaaacaaga cgatggcaac ggccagtaat gaaagaaccc aaatcaattc accgttcaca
     3961 acttatcctt gttaattgag ggggatgact tgattctgcc ataaaaaagc cccgacgaga
     4021 cggggctaaa tcatgatcag gtgtttcact gaataataac atcgccattt ggctgtttgg
     4081 tcacagtaat ttgctccaga ctgtggagga ccaaatcgac ctcattcagg cgcggggtat
     4141 ctgccggagc gttaaccgca atgacatggc aacccgccgc caggccagaa agcacgccag
     4201 cgggagcatc ttccaccacc acacactcct gcggcgcaag ccccagcagc tgcgcaccta
     4261 acagatacgc atcaggttct ggttttccgc gcttcactcg ctcagcggtt acaaacacct
     4321 ctggtgcggg aagcccagct attttatggc gcgctcgcgc taccggcatg gagccagaag
     4381 tcacaatggc ccacggaata cctgctttat tcaaatgatt gagtaaggcg attgcccccg
     4441 gaagcgcggt aataccttcg gtttccgtgg cctcgatgtg ctccagacgc gtaaactcgg
     4501 cggcaatatc agcctcggat ttgcccgcca taaaatggcg caaagaggtg atcgcctgtt
     4561 taccgtgaat gaaagccagc acctcttccg gtgctaaccc atgacgtctg gcccagttgc
     4621 tccacgcccg ttctaccgca ggcagggaat ccaccagcgt tccatcaaga tcaaacagaa
     4681 aacctttgca ccgcacacgg gcctcctcag gcgttgataa tttgattaat ttcgttggcg
     4741 ctcaaatggt actgacgcgg gcaggcatgc cacacattaa gcatgcgctg atatttttcc
     4801 cacattggcg tctgggcgtt aaaaccgtga gttccggcgt caaaatgggt atagcgccct
     4861 tccacattaa ccataaagcg gacataaccg aggtaacgtg cttcagtggc ggcgtcaaag
     4921 ccgaggaagg tgacacgacg ttcatcgatg gattgctggt cctgcaaatt agaccaggaa
     4981 acatgcaacg catgatacat ctccataatg tcgatgatag tgcggcaggt ttcttctttc
     5041 agctcgccaa actcgcgatc caattcacgc atctgtaatc cgtaaccacg ctcaataatt
     5101 gtttgcaggc gacggtaacg ttcagcattt gccggatcga gcatagtcat catcttgtac
     5161 tgattagaca aaataagacg ttgcgcgttg gtcatttcca ttgttgactc ctgtatcact
     5221 atactacggt gaaaaaaaag aaggctgagt atgccttctt ttatatgcgt aatcaggggt
     5281 caattacaaa tcatcaagga aagttttatc cagttgtttg aaggcgcgct taagcgtgtc
     5341 agctaatgcc tggtaatcag gcttgccttc aacgggtgcc aacacctgtc cagactcctg
     5401 caatttaccg cgaacttcat aaaaccagtt aaggattgca gggggtaatg gcgttacaga
     5461 acgcttgccc agccaccaca atccctgcat gggtaaactt aaggcgaaca gcgcagtggc
     5521 aactgccggc ccaagctgac cgcccagggc aatctgccag cagagagtaa atacggcgat
     5581 cggcggcata aaacggatcg cataacgcgt catcttgata acgcgatttt cgacaaagac
     5641 cggggcaagg cgtttttcca gcggccacgt ctttgagtaa tgctgtcccc ggcgaaacaa
     5701 gctaaaaaaa ttaacagaac gattatccgg cgttgacatg cttcacctca acttcacata
     5761 taaagattca aaaatttgtg caaattcaca actcagcggg acaacgttca aaacattttg
     5821 tcttccatac ccactatcag gtatccttta gcagcctgaa ggcctaagta gtacatattc
     5881 attgagtcgt caaattcata tacattatgc cattggctga aaattacgca aaatggcata
     5941 gactcaagat atttcttcca tcatgcaaaa aaaatttgca gtgcatgatg ttaatcataa
     6001 atgtcggtgt catcatgcgc tacgctctat ggctccctga cgttttttta gccacgtatc
     6061 aattataggt acttccatgt cgagtaagtt agtactggtt ctgaactgcg gtagttcttc
     6121 actgaaattt gccatcatcg atgcagtaaa tggtgaagag tacctttctg gtttagccga
     6181 atgtttccac ctgcccgaag cacgtatcaa atggaaaatg gacggcaata aacaggaagc
     6241 ggctttaggt gcaggcgccg ctcacagcga agcgctcaac tttatcgtta atactattct
     6301 ggcacaaaaa ccagaactgt ctgcgcagct gactgctatc ggtcaccgta tcgtacacgg
     6361 cggcgaaaag tataccagct ccgtagtgat cgatgagtct gttattcagg gtatcaaaga
     6421 tgcagcttct tttgcaccgc tgcacaaccc ggctcacctg atcggtatcg aagaagctct
     6481 gaaatctttc ccacagctga aagacaaaaa cgttgctgta tttgacaccg cgttccacca
     6541 gactatgccg gaagagtctt acctctacgc cctgccgtac aacctgtaca aagagcacgg
     6601 catccgtcgt tacggcgcgc acggcaccag ccacttctat gtaacccagg aagcggcaaa
     6661 aatgctgaac aaaccggtag aagaactgaa catcatcacc tgccacctgg gcaacggtgg
     6721 ttccgtttct gctatccgca acggtaaatg cgttgacacc tctatgggcc tgaccccgct
     6781 ggaaggtctg gtcatgggta cccgttctgg tgatatcgat ccggcgatca tcttccacct
     6841 gcacgacacc ctgggcatga gcgttgacgc aatcaacaaa ctgctgacca aagagtctgg
     6901 cctgctgggt ctgaccgaag tgaccagcga ctgccgctat gttgaagaca actacgcgac
     6961 gaaagaagac gcgaagcgcg caatggacgt ttactgccac cgcctggcga aatacatcgg
     7021 tgcctacact gcgctgatgg atggtcgtct ggacgctgtt gtattcactg gtggtatcgg
     7081 tgaaaatgcc gcgatggttc gtgaactgtc tctgggcaaa ctgggcgtgc tgggctttga
     7141 agttgatcat gaacgcaacc tggctgcacg tttcggcaaa tctggtttca tcaacaaaga
     7201 aggtacccgt cctgcggtgg ttatcccaac caacgaagaa ctggttatcg cgcaagacgc
     7261 gagccgcctg actgcctgat ttcacaccgc cagctcagct ggcggtgctg ttttgtaacc
     7321 cgccaaatcg gcggtaacga aagaggataa accgtgtccc gtattattat gctgatccct
     7381 accggaacca gcgtcggtct gaccagcgtc agccttggcg tgatccgtgc aatggaacgc
     7441 aaaggcgttc gtctgagcgt tttcaaacct atcgctcagc cgcgtaccgg tggcgatgcg
     7501 cccgatcaga ctacgactat cgtgcgtgcg aactcttcca ccacgacggc cgctgaaccg
     7561 ctgaaaatga gctacgttga aggtctgctt tccagcaatc agaaagatgt gctgatggaa
     7621 gagatcgtcg caaactacca cgctaacacc aaagacgctg aagtcgttct ggttgaaggt
     7681 ctggtcccga cacgtaagca ccagtttgcc cagtctctga actacgaaat cgctaaaacg
     7741 ctgaatgcgg aaatcgtctt cgttatgtct cagggcactg acaccccgga acagctgaaa
     7801 gagcgtatcg aactgacccg caacagcttc ggcggtgcca aaaacaccaa catcaccggc
     7861 gttatcgtta acaaactgaa cgcaccggtt gatgaacagg gtcgtactcg cccggatctg
     7921 tccgagattt tcgacgactc ttccaaagct aaagtaaaca atgttgatcc ggcgaagctg
     7981 caagaatcca gcccgctgcc ggttctcggc gctgtgccgt ggagctttga cctgatcgcg
     8041 actcgtgcga tcgatatggc tcgccacctg aatgcgacca tcatcaacga aggcgacatc
     8101 aatactcgcc gcgttaaatc cgtcactttc tgcgcacgca gcattccgca catgctggag
     8161 cacttccgtg ccggttctct gctggtgact tccgcagacc gtcctgacgt gctggtggcc
     8221 gcttgcctgg cagccatgaa cggcgtagaa atcggtgccc tgctgctgac tggcggctac
     8281 gaaatggacg cgcgcatttc taaactgtgc gaacgtgctt tcgctaccgg cctgccggta
     8341 tttatggtga acaccaacac ctggcagacc tctctgagcc tgcagagctt caacctggaa
     8401 gttccggttg acgatcacga gcgtatcgag aaagttcagg aatacgttgc taactacatc
     8461 aacgctgact ggatcgaatc tctgactgcc acttctgagc gcagccgtcg tctgtctccg
     8521 cctgcgttcc gttatcagct gactgaactt gcgcgcaaag cgggcaaacg tatcgtactg
     8581 ccggaaggtg acgaaccgcg taccgttaaa gcagccgcta tctgtgctga acgtggtatc
     8641 gcaacttgcg tactgctggg taatccggca gagatcaacc gtgttgcagc gtctcagggt
     8701 gtagaactgg gtgcagggat tgaaatcgtt gatccagaag tggttcgcga aagctatgtt
     8761 ggtcgtctgg tcgaactgcg taagaacaaa ggcatgaccg aaaccgttgc ccgcgaacag
     8821 ctggaagaca acgtggtgct cggtacgctg atgctggaac aggatgaagt tgatggtctg
     8881 gtttccggtg ctgttcacac taccgcaaac accatccgtc cgccgctgca gctgatcaaa
     8941 actgcaccgg gcagctccct ggtatcttcc gtgttcttca tgctgctgcc ggaacaggtt
     9001 tacgtttacg gtgactgtgc gatcaacccg gatccgaccg ctgaacagct ggcagaaatc
     9061 gcgattcagt ccgctgattc cgctgcggcc ttcggtatcg aaccgcgcgt tgctatgctc
     9121 tcctactcca ccggtacttc tggtgcaggt agcgacgtag aaaaagttcg cgaagcaact
     9181 cgtctggcgc aggaaaaacg tcctgacctg atgatcgacg gtccgctgca gtacgacgct
     9241 gcggtaatgg ctgacgttgc gaaatccaaa gcgccgaact ctccggttgc aggtcgcgct
     9301 accgtgttca tcttcccgga tctgaacacc ggtaacacca cctacaaagc ggtacagcgt
     9361 tctgccgacc tgatctccat cgggccgatg ctgcagggta tgcgcaagcc ggttaacgac
     9421 ctgtcccgtg gcgcactggt tgacgatatc gtctacacca tcgcgctgac tgcgattcag
     9481 tctgcacagc agcagtaatc tcgtcatcat ccgcagcttt gcgctgcgga tatctgaacc
     9541 ggaaataatc actatttccg gttttttatt ctcttaatct gcattaatcc tttctgatta
     9601 tcttgcttaa ctgcgctgca tcaatgaatt gcgccatttc actttgcata cttaccactt
     9661 tgttttgtgc aagggaatat ttgcgctatg tccgcaatca ctgaatccaa accaacaaga
     9721 agatgggcaa tgcccgatac gttggtgatt atcttttttg ttgctatttt aaccagcctt
     9781 gccacctggg tagttccggt ggggatgttt gacagtcagg aagtgcagta tcaggttgat
     9841 ggtcaaacaa aaacacgcaa agtcgtagat ccacactcat ttcgcattct gactaacgaa
     9901 gcaggcgaac ctgagtatca ccgcgtacag ctgttcacga cgggcgatga acgcccgggc
     9961 ctgatgaact tcccgtttga aggattaacc tcaggatcga aatacgggac agctgttggc
    10021 atcatcatgt ttatgctggt gattggcggc gcgtttggca ttgtgatgcg tacaggaacc
    10081 attgataacg gtatcctggc gcttattcgc catacccgcg ggaatgaaat tctctttatt
    10141 cctgcgctgt ttattctgtt ttcacttggc ggcgcggtat ttggtatggg agaagaggcc
    10201 gtcgcctttg ccattatcat cgcaccgcta atggtccggc tgggctatga cagtattacc
    10261 accgtcctgg tgacctatat tgccacgcaa atcggttttg ccagttcgtg gatgaacccg
    10321 ttttgtgtgg tcgttgctca ggggattgcc ggcgttccgg tgctttctgg ctccgggttg
    10381 cgcatcgtgg tgtgggttat cgccactctg attggcctga tctttaccat ggtgtacgcc
    10441 tcacgagtga aaaagaatcc tcttctgtca cgcgtgcatg agtccgaccg cttctttcgt
    10501 gaaaagcagg ctgatgttga acaacgtccg tttacctttg gtgactggct ggtattgatt
    10561 gtcctgaccg ccgtaatggt ctgggtgatt tggggcgtga tcgttaatgc ctggtttatt
    10621 ccagaaattg ccagccagtt cttcaccatg ggtctggtga ttggcatcat cggcgttgtt
    10681 ttccgcctta acggcatgac ggttaatacc atggcttcat cctttaccga aggggcgcga
    10741 atgatgatcg cccctgccct gctggtgggt ttcgccaaag ggattttgct gctggtcggt
    10801 aatggtgaag caggtgatgc cagcgtgtta aataccatcc tcaacagcat tgccaatgcc
    10861 attagcggtc tggacaacgc tgtcgcggcc tggtttatgt tgctcttcca ggcggtattt
    10921 aatttctttg tgacatccgg ttctggtcag gcggcgttaa ccatgccgtt actggcaccg
    10981 cttggcgatc tggtcggtgt taaccgtcag gttaccgtgc tggcattcca gtttggtgat
    11041 ggcttcagcc acatcattta cccaacctca gcttcgttaa tggcgacgct cggtgtttgc
    11101 cgggtggact tccgtaactg gctgaaggtg ggcgcgacac tgcttggact gctgtttatt
    11161 atgtccagcg tcgtggtgat cggcgctcag ttgatgggct accactaaaa atgttaagag
    11221 ccgcaattgc ggctcttttt tcattctgcc gtttcagtct ctacggcttc atttttggca
    11281 ttgcgcttca tccacaacgc cagcgctttc agcgagtctg gagtgaactc atcgcagcgt
    11341 gcggtgattt cttccggcgt cagccagcaa acttcactga cttcatcttc ctgtagggcg
    11401 aagggaccgt gagagacgca gctgaacaac gcgccccaga cacggcaatt tttatcttcg
    11461 aaatagaact gcccgtgctc ggcaaagggg acaccggcaa tgcccaactc ttcttccgct
    11521 tcgcgacgcg cggattccag cagttgctca tcggcctgaa ccacaccgcc tgcggtcgca
    11581 tctaacatgc cgggtaaaaa gtcttttgtc tcggtacgac gctggaccag aattttgccc
    11641 atgccatcat gcacgacgat gtaagttgca cgatgacgca gacactgtgc ccgcatttgt
    11701 tcccggctgg cttgtgcaat gacttcgttc tcttcattga caatatccac ccattcagta
    11761 cttgccaaac gacgctgttc cattatcagg aaaccttctt tttctggcgc tcttacggcg
    11821 cattttgagt tgtgggtaaa ttacggatta atcgcgacct gcgcaatgat actttgatca
    11881 ttgagtgcga ttacactaag tacgtcatta tccagcatgc cataactcgc cggattaccg
    11941 cctttcggaa tactcaccga gccggggttg aaatggaaaa tctccccccg ctgttctgcc
    12001 actggcagat gggtatgacc gtacaccagc acatcgttct ggtttaaagc aggtagattt
    12061 tccgggccaa aaagatgacc atgcgtcaaa aacagacgtt gtttttccag taatacctgt
    12121 tgccacggcg cggttatcgg gaaatgcagc agcatttgat ccacttcgct gtcgcagttg
    12181 ccgcgcacag cgataacctt atgtgccact tcattaagcc gttcagcgac tttggctggc
    12241 gcgtaaccct ccggtaaagc attacgcggg ccgtgattca acacgtcgcc aaggatcacc
    12301 agccactggg caccgctttg ggcaaacaac tccagaacac gttccgtcgc cggtaacgac
    12361 ccatgaatgt ccgatgcaaa catcagtttc atcactcact cctcgtcgaa aaaacgtaag
    12421 ctatgatact ggattctgtc gttgctatca gccagattgc ttcgccgaaa gtgcaataaa
    12481 acgctggaca gacgctcgct gccactggaa tgtcgcataa tccaccaggc gttctggcac
    12541 ctcatcgcca tgtagtacca ggcggttaat cattagcgcc agatcagtat cagcaatgca
    12601 ccattcacca aataaattcg gctgacccag tactaacaaa tgttctgcca tcgcaaacag
    12661 tttctctgca ctggcttttc cctcggccgt tagtggcgct tttttcgccc ccgcaaagac
    12721 aacatccgtc ggacgctctt cgcggatggg catcagatcg ctgcgcagcc aggcctgaat
    12781 ctgtcgtgca cgcgcacgat tttctaaatc aagcggataa atacgttccc aggtcggtgg
    12841 cgcaaatcga tcttccagat actccgcaat ggcagaagat tcactcaact caaaatcatc
    12901 gatttgtaat aacggcacac ggcgtgtctg accgtaacct tgccacgtcg gctgcaaatg
    12961 ttcaccgctg tcgaggtcga tggtcttgat atgaaacgac aggccttttt cctgcaacgc
    13021 cacccaggcg gataacacat aaggggagaa aaagtgggca tctgaccaaa gcgtgatagc
    13081 gggtttactc attatgtcct cggcaataaa gggggctggc tatcaaacta tagagccttt
    13141 ttgtcactgt cacgtgacga atactcacgt aagtcgccgc gctttctata cttgtggtgt
    13201 tcagatgatt aaacaaccgg agctgcaatg atcgatctct atttcgcccc gacacccaat
    13261 ggtcacaaaa ttacgctgtt tctcgaagaa gcagagcttg attatcgctt gattaaggta
    13321 gacctgggga aaggcggtca gtttcgtccg gaatttttgc gcatttcgcc caacaacaaa
    13381 attccggcaa ttgttgatca ttctcctgcc gatggcggcg aaccgttaag cctctttgag
    13441 tctggtgcca ttttgttgta tctggctgag aaaacaggac tctttttgag tcatgaaacg
    13501 cgtgagcgcg ccgccacatt acagtggtta ttctggcagg taggcggact ggggccgatg
    13561 cttgggcaaa atcatcattt taatcacgca gccccccaaa ccattcctta cgctattgaa
    13621 cgttatcagg ttgaaactca gcgtctttac catgtactga acaagcggct ggaaaactcg
    13681 ccctggctgg gaggcgagaa ctacagcatt gcggatattg cctgctggcc gtgggttaat
    13741 gcctggactc gccagcgaat tgacctcgca atgtatccgg cagtcaagaa ctggcatgag
    13801 cggatccgtt cgcgccctgc caccgggcag gcactgctaa aagcacaact cggtgatgag
    13861 cgttcggata gttaacagaa acaggttctc gtgtattatt tcatcctaag taaaacaacg
    13921 gagaacctgc aatggcacaa cctgccgcta ttattcgtat aaagaacctt cgtttgcgta
    13981 cgtttatcgg aattaaggaa gaagaaatta acaaccgtca ggatattgtt atcaatgtga
    14041 cgatccacta ccccgccgat aaagcgcgca ctagcgaaga tatcaacgat gcgctgaatt
    14101 atcgcaccgt aacgaaaaac attattcagc atgtagagaa taaccgtttc tctttgctgg
    14161 aaaaattaac tcaggatgtg ctcgatatcg cacgtgaaca tcactgggtg acgtatgctg
    14221 aagtggagat cgataaactg cacgcgctgc gctacgccga ttcggtatcc atgaccttaa
    14281 gctggcagcg ttaaccgcca tatcgggagg ctgcatgaac atagtgatca ccggagggac
    14341 gggattaatt ggtcgccatt tgattccgcg tttgctggag ctgggccatc aaatcacggt
    14401 agtgacgcgt aacccacaga aagccagttc cgttctcggc cctcgggtga cgctatggca
    14461 agggctagcc gatcaaagca acctcaacgg cgttgatgcg gtaatcaacc tggccggaga
    14521 accgattgct gataaacgct ggactcacga gcaaaaagag cgtctctgcc aaagccgctg
    14581 gaatatcacg caaaaactgg tcgatttgat taatgccagc gacacgccgc cgtcggtact
    14641 catttccggc tcggcaacgg gctattatgg cgacttaggt gaagtggtgg ttaccgaaga
    14701 ggaaccgccg cataacgaat ttactcataa actctgcgcc cgctgggaag agattgcctg
    14761 ccgggcgcaa agtgacaaaa cgcgagtgtg cctgctgcga accggcgtgg tactggcacc
    14821 ggacggcggt attctcggta aaatgctgcc accgtttcgt cttggcctgg gcgggccgat
    14881 tggttccggt cggcagtatc ttgcctggat tcatatcgat gatatggtca acggcattct
    14941 ctggctgctg gataacgagc tgcgcgggcc atttaatatg gtttcgccct acccgatacg
    15001 caatgaacaa tttgcccatg cgctcggtca tgcgctgcat cgcccggcta ttttgcgcgt
    15061 ccccgcaacc gccattcggc tgttaatggg cgaatcttca gtactggtat taggtggaca
    15121 acgcgcgctg cctaaacggc tggaagaagc gggttttgcg tttcgttggt acgatttaga
    15181 agaggcgctg gcggatgtcg ttcgctgatg tggtttactg caaacatccg ccagttaact
    15241 cccggtgtta cagggttagt ggctttgcgc tataagatcg tctggcgata gtcgggtcac
    15301 catcataact aactctctgt ctaaacctct atccagcatc tcctgagcaa tacgcagggc
    15361 ttcttcgcgt ttgcccagaa ttaatccatc attccgccct tcttcacgta atctgtcagc
    15421 aatggtcatc agtttctcct tttcttgtgg tgcgcgttct gctatctcac caataaatgc
    15481 acggaaacgc tgggcatctc ccgtttgtaa tacataatta aacagggctt ttagctgtct
    15541 gtcattagtg ttccctgtaa ctagcagcga aacaatttgg tcgactaatc ccaacagatc
    15601 gcgctgacga atatgtttct gaattaactc caacagcgcc attttgcggt gttgcataat
    15661 ctcgtcatcc ggcaccacgg taatatccac caacggaaaa gccgatgaat atattttacg
    15721 ggcaatcgca ggctcagcaa attcatcaag ccagcagagt gaataaggat aaggacttct
    15781 gcaaccatga taaaacagca tcgggatcac caatggaagc tctttatagc ccgcatcaag
    15841 atggttttgc attgccgcaa tggaataacg catcatgcga aaagccatta attcttccgg
    15901 cttactttgg tgctctatca ctacataaat ataacccact ccctcctgcg ttttcacaga
    15961 ccacaagagg tcggaataat attgccgcag gtcgtcatca ataaaactgt ttggttccag
    16021 tttaagcgtc gttaaatcac acagtttgcg cagcggcgcg ggaagatgaa tatcaataaa
    16081 atcccgcgcg gtgtctggat ggcgtaaaaa agatttaaat accgcatcat gcggcgtgga
    16141 agttgtcgat attgtcatgg cgttccgtca cccctcaaat ttaagatgac gcgacaataa
    16201 ccacgattaa cacccaatgc agcaggcagt ttttatcttt ggacagcgaa ttcagaagta
    16261 tttttagcgg actgcaactt ttacatttca gcggaagctg actcgcaaat tccccatgaa
    16321 aatactccgg cagcgttagc caccggagag gaaattattt cagcgatccc ttaaggaact
    16381 gttgcagacg agggctttgc gggttgccaa ataactgctc cggcgcgccc tcttcttcta
    16441 ttttcccctg atggaggaaa atgacgtgag tagaaacatg gcgagcaaag cccatttcgt
    16501 gagtcactac caccatggtt ttcccctctt ctgccagttg ctgcataata cgtaacactt
    16561 cgcctaccag ttcaggatcg agcgccgagg taggttcatc aaacagtaaa acttccggtt
    16621 ccatcgccag cgcccgcgcg atagaaacac gctgttgctg accgccggaa agatgcaccg
    16681 gatatttccc ctgcgcacgt tcgtctatcc cgacttttgc cagatacttc accgcccgct
    16741 cgcgcgcttc ctgcttgctc aggcccaaca cctgaatcgg cgcttccatg acgttttcca
    16801 gcaccgtcat atggctccag agattgaagt gctggaatac catcgtcagg cgtgtgcgca
    16861 gtaagcgcag ttgattttta tcggcgactt tgagttgacc gtctttgtcg cgcaccagat
    16921 tgatcgtctg gccattgacc acgatcgacc cttcactcgg tttttcgagg aagttaatgc
    16981 agcgcagaaa ggtacttttc cccgatcccg acgatccgat gatgcttatt acatctccgg
    17041 cattcgcttg cagtgagacc cctttcagca cttcatgttc gccgtagcgt ttgtgcaaat
    17101 cgataacgtt taatttattc tcggacatcg tattctcagt gcgttgaaga aggtttcaca
    17161 tgctgcaacc agcgtttttc cgctctgcga aagaggctga tcaggacata agagatgatt
    17221 aaatagagca ccgcggcaat gccgaaggcg gtaaaaggtt gatacgtggc ggcgttaata
    17281 tcgcgggcta ttttcagcag atccggcaca gtggccgtaa acgccagcgc agtagagtgc
    17341 agcatcagga tcacttcgtt gctgtatgcc ggtaacgcaa tacgcagcgc agaaggcaaa
    17401 ataatgcaac gatacatttt aaaagtcgag aagccatagg ctctggcggc ttcaatttcc
    17461 ccatgcggaa ccgaacggat tgccccagca aaaatctcgg tagtgtaagc gcaggtgtta
    17521 agcgtcagcg ccagcacggt acagttcagg ccactgcgga agaaagcgtt aaggaattcg
    17581 gttcccttaa caatctcaag cgtgtacatg ccggaataga acaccagcaa ctgaacatac
    17641 agcggcgtac cgcgaaaaat ataggtaaat aaccagattg gaaactggat gtatttatta
    17701 ctggagacac gaccaatcgc cagaaacagc gccaggactc cgcctatcac taccgacaaa
    17761 ataagcagcc acagagtgat cgccacacca gtaaagcgat aaccgtcggt ccacagcagc
    17821 ggtttccagt attcatgtaa gatttcgatc acaggtcagc cctcttcaca cccacggagt
    17881 agcggcgctc aaggaacagc agcacaccat tggaaacagt ggtgaaaacc aggtaaatca
    17941 cgccacagac gatggcgaaa tagaacggtt cccaggtact tttgcctgcc agttgggtgg
    18001 ctttgaccac atcttccagg ccgagtaacg aaaccagtgc ggtagatttg aggatcacct
    18061 gccagttgtt gccaatgcct ggcagggcgt aacgcatcat cgccggaaac atgatccgcc
    18121 gaaacacttg cccacgagta aaaccgaacg ccgtcgccgc ctctatatgt cctttcggca
    18181 ctgccataaa cgcgccacgg aacgtttcgg taaaataagc accgtagata aaaccgagag
    18241 taataatacc agcgaccatc ggatcgatat caatctgccc gacgcccatc gcctccgtca
    18301 ccgtgtttag tgcaatctgc aaaccgtaga aaatcagcag catcaacacc aagtccggca
    18361 cgcctcgaat cagcgtggtg tacccttcga aaatcagccc cgaaagccga ttttgcgaga
    18421 gcttaccgcc agcgccaatt aaaccgatga ttacagcgag cactacagaa ctgatagcca
    18481 gctccagcgt gacgagcgca ccctgtaaaa taacacctga aaacccatac aacatgctgc
    18541 ctgtcctgtc gtgtgtggtg aattaccgcc tcttgtctcc ctccggttac ccgaagggag
    18601 cgggctttct ttcaccgatg gcgattaacc gccataaaca tcaaaatcga agtacttttt
    18661 cgctaatttc tcgtaagtac cgtcagcgcg catttcggca aaggctttgt tcagtgcctc
    18721 gcgcagttcg ttatcttctt tacgcaggcc catgccggtc cctacgccaa acagtttttc
    18781 atctttaaca gacgggccac cgaatttgta atctttaccg acaggttgtt tgaggaaacc
    18841 ttcgctggca gcgacctcat cctggaacgc ggcatcaata cgtccggcag tcaggtcaga
    18901 ataaatgttg tcctgcccct gatacgagac gatttcaatg ccttttggtg cccaatgttc
    18961 attaccgaac gtctcctggg tggtgccctg caatacgcct acccgtttgc ctttcagcga
    19021 ctcgactgtc ggctgaatgt cggaattttt cgccaccacc aaacgagaat cggcagcgta
    19081 cagtttgtcg gtgaaggcta tttcttgctg acgtttttcc gtaatggaaa gcgatgacat
    19141 gatggcgtca atcttcttcg cttttaagga cgggattaac gcatccagcg gattttcgac
    19201 aaacgtacat tgcgtattga tgcgtttgca taattccttt gccagatcga tatcgaagcc
    19261 aaccagttcg ccttgtgaat tttttgattc aaatggcgca taggtcgggt cggtaccgat
    19321 gcggatgttt tgcggaatcg cagcaaacgc cgcagttgcg ctggagaagg ccagaaccag
    19381 agagagcgat agcaccagtt ttttcataat gtcctcaact gacagtcttt ttatagggaa
    19441 tatttacagg tttgttacac ttatcgtgcc ataaaattga ccatcaaggc aaaatatccc
    19501 gccccgttag acgtattatt tttcattaaa aatgcttaag tatgcatttc aatgcaccac
    19561 gatagtgcaa caaacctggc gtgcaccatg atgatcattc catcaggtac agcttcccag
    19621 cgacgtatca gtcaccgtag acattaaagt cgaaatactt tttcgccatc ttgtcgtagg
    19681 tgccgtcctg acgcagctcg ccaagcgcct tattgaaggc agccgtcagt tcagcatcat
    19741 ctttacgtag ccctacaccg gtgccatcac cgaagtattt tttgtctttt actgatgagc
    19801 cagcaaaggc gaaatcttta ccagcaggtt gcttgaggaa tccttcgctg gcagcaactt
    19861 catcttgtaa cgcagcatcc agacgtcctg cagccagatc ggaatagacc aaatcctggt
    19921 tggcataggc caccacatcc acgcctttgc tacgccaggt ctcgttagcg taagcttcct
    19981 gggttgatcc ctgcagcaca ccaacatgtt tacctttcag tgaatccagc gttggctgaa
    20041 tcggtgaacc tttggcagca atcaaacgag aatctgcggc gtacagcttg tcggagaagg
    20101 caatctcctg ctgacgttta tcggtaatgg aaagcgacga aataatggcg tcgatttttt
    20161 tcgctttcag tgaggggatc agcgcgtcaa agtcactggc aacccaggta catttcacct
    20221 gcatccgttt gcacatctcg ttaccgagat cgatatcaaa gccaacaaaa tcacctttag
    20281 catctttcga cgagaacggc gcataggtgg tatcggttcc gatacgtacc gtctccggta
    20341 gcgccgcata gctggaagcc gctgcggaga gaccgactaa caaagacaga gcgagaatcg
    20401 acttcttcat acataaccct caagtgaaaa tggctttttt atgttgtgta ttgtgttgtg
    20461 tgtttgcagg ctctttcatg caggtcttat gccatcttga cgacaacagt aacattcaac
    20521 gttaaatatg ttaataagac gttgcattat tgtcctgaag ttgaagatag caggtatagc
    20581 ggttgaatcg cagcgtttcg attgaatggc agaaacaaaa tgtcgaggat ttgatcgcgg
    20641 ttgcaaaatt gccctgaaac agggcaacag cggagttatg cgccctgcca gcgggcaaag
    20701 agatcttcag gaagggttat tgcaaactgg tcaagaacac gattaaccgt ctgatttatc
    20761 acatcatcaa gggattgcgg gcgatgataa aacgccggaa cgggaggcat aatcaccgca
    20821 ccgatttctg ccgcctgagt cattaaacgc agatggccta agtgcaatgg tgtttcacgc
    20881 acgcagagca ccaacgggcg acgctctttc agcaccacat ctgccgcacg ggtcagtaag
    20941 ccatcagtat agctatggac aatgccggaa agggttttga ttgaacaggg taaaatcacc
    21001 atccccagcg tctggaaaga accggaagag atgctggcgg aaatatcgcg cgcatcgtgc
    21061 gtgacatcag ctaatgcctg cacttcgcgc agggaaaaat ccgtttcgag ggataaggtc
    21121 tggcgcgccg cctggctcat caccagatgc gtttcgatat ctgtgacatc gcgcagaacc
    21181 tgtaataagc gcacgccata aatcgcgccg ctggcaccgc tgatgcctac aatgagtcgt
    21241 ttcataaata gttgccctgt cagacttgca ggcagacttt gcagtatttc ggcgggagtt
    21301 gcaagtcagg gtgccagacc ggcaccctca gcgaaggcat catccttcgt tatgcatttc
    21361 gagattttcc acttcgttct gacgttgcac tgctttggcg tcatcattac gtaacgtatc
    21421 gaggaaatcg aggtagccct gatcaacatc tttggtgacg tagacgccgt tgaacaccga
    21481 gcattcaaac tgctggatat ccggattttc agcgcgaacg gcgtcgatca gatcgttcag
    21541 atcctggaaa atcaacccgt cagcaccgat gatctggcga atttcatcaa cttcgcgacc
    21601 gtgagcgatc agttccgtgg cgctcggcat atcaatacca taaacgttcg ggaagcgaat
    21661 ttccggtgcc gcagaagcga ggtacacttt cttcgctccg gcttcgcgtg ccatctcgat
    21721 aatctgctca gaagtggtgc cacggacgat ggagtcgtcg accagcagga cgtttttatc
    21781 gcggaactcg gcgcggttgg cattcagttt acggcgcacg gacttacgac gcagctgctg
    21841 gcccggcatg ataaaggtgc ggccaacata gcggttttta acgaagccct ggcggtacgg
    21901 tttgcccaga atacgagcaa tttccagcgc gatatcacac gaggtttctg ggatcgggat
    21961 caccacgtcg atatccagat cttcccattc gcgggcaatt ttctcgccca gtttcgtgcc
    22021 catattcaca cgcgcgctgt aaacggaaat tttgtcgatg aacgagtccg ggcgagcaaa
    22081 gtatacatac tcaaacaggc acggattgct gaccggattg tcagcacatt gacgggtaaa
    22141 caactgccct tcttcagtga tgtaaatcgc ttcgcccggc gcgacgtcac gcaggaaatc
    22201 aaagcccagc gtatcgagcg ctacgctttc ggaagcgacc atatattctg tacggttctc
    22261 gtcaatatca cgttttccca gtaccagcgg acgaatcccg tttggatcgc ggaaagcaac
    22321 cataccgtgg ccgataatca tcgccacaca ggcatatgcg ccgcggatta agcggtttgt
    22381 ggcagcaatg gcagcgaaaa tattgtcggc ttccagcggg tagtggcgga agttgtccag
    22441 ctcgctagcg aagatattaa gcagaatttc cgagtcggaa gtggtgttga tgtggcggcg
    22501 tttttcttca aacagttttt tacgcaactc gtgagcgttg gtcagattgc cgttgtgggc
    22561 aagcgtaatg ccatacgggg agttaacgta aaacggctgc gcttcagagg cgctggagct
    22621 gccagccgta gggtaacgca catgaccaat gcccatattg ccctgcaaac gctgcatatg
    22681 gcgagcttca aatacatcgc tcaccagccc gttcgcttta cgcaaacgga agcagttatt
    22741 ggcatctatg gtgatgatgc cggcggcatc ctgaccgcga tgctgaagca ccgttaaggc
    22801 atcataaatc gactggttaa ccggcataac accggcgata ccgacaatac cgcacatacg
    22861 tctttttcct cgttaagcca catctcagag cacttacgct ctgggcaaga aacttgacga
    22921 gctttgcaga taatcaaaaa accatctgat gataaaactg aactgcggga tcagctgtga
    22981 tttgctccag tcttcgcttt tcgacacccc ggtaaaggag tcgagaaaga atagaatggc
    23041 ggcaacaatc aacacaccgc gcaacgcacc gaaacagacg cccagcaccc gatcggtgcc
    23101 tgacaacccc gttttctcca ccagctggcc tatcacgaag ttcacgatag caccaacgat
    23161 cagggtagcg ataaatagta ccgcgatggc aatcccattt cgaaccagtt cgtcttcaaa
    23221 gcccgtaaac cagactgaca ggtaagtgta gtaatgactg gcaacaaaga aagcacaacc
    23281 ccatgtcacc agcgataacg cttcacgaac aaagccgcgg atcaggctaa ccagagagga
    23341 aaaagcaatc accgcgatta tggcgtaatc aatccagacc atatgtgtcc cacgatttta
    23401 cgccctgtca tcctgttcgg ggcgcattct aacagaaaaa gaaaacgttt gcgtagggat
    23461 ttccttcccg cgcatcaata aaaatggcgc tgaaaaaata ttcaacgcca tcgacttttt
    23521 atgcctttgc gacatcgtgc aatgcgtgtc ggatgcggcg taaacgcctt atccgaccta
    23581 cggttctaac cctgcccagt cctgataaga cgcgccagcg tcgcatcagg caaggccgta
    23641 ttaattcggc gtatagccca ttaccacgcc acttaagcca gaaagttgct tcaactcacc
    23701 cagcgaacct ttcagcttat ctttcgaggc atccggccca accagaatac gggtaatttt
    23761 accctgcact ggcgtggatg gcgacgtata aacccgataa ccggcaccgc gcagcttacc
    23821 gacaatctca tttactttat cggcattttt cagcgcaccc agttgcacaa cataggcttt
    23881 acccgttggc gctgcttttt cttccacgac cggcttcggt tctggcttcg gcgcaggtgg
    23941 tgcttcaacc ttcggtttag gcggctccac cggtttcggc ttcggtgggg cgaccggtgc
    24001 aggttccggt tcaaactcgg tgttattggc tgcaatagtg gccggatcga gcgacggtgc
    24061 tgcggcatca cctgcccgca cctcttccgc tgcgccttcc ggcggctgcg tcggcaacgc
    24121 ctgggtggcg gctggcatca tatcaggctc atcacgatcg cccgctttcg gcaccagcgg
    24181 gatagccgcg aactcatcct gataatgttt tttctgcccg tccagcagcc ctggaagtac
    24241 aatcaccccc agcgccacca gcacgatcgt gcccactaac cgattctgaa acttacttgc
    24301 caccgcttct cctcgcgtca atcacttcca tgacatgtgc gaccgtgtgg aaagaaccac
    24361 acaccagcac ggtgtcttcc gctttagcgt ccgccattgc ggcatcccat gcctgcgcaa
    24421 cgctatcaaa tgatttgccg ttacccaaat gctcaagcag ttgttctgcc gtggcaccgc
    24481 gcggcccttc cagtggcgca caataccagt catcaaccac gcttttcaac caggccagag
    24541 ttccggcaat atctttatca tgtagcatac cgataaccgc cagcacgcgc ccgtttttcg
    24601 gtagcgcttt catacgcccg gtgagatatt ccgccgcatg tggattatgc gcgacatcaa
    24661 aaataacgcg tggcgactcg ctcacaatct ggaaacgtcc cggcaaaatt gcgctggcaa
    24721 tcccgtcgcg aatggcattt tcactgactt ccagcccgct ggcacgcagt gccgccagcg
    24781 ctgttgcggc attcggttgc gggacaagcg gcaacggcag attttccagc gtgccgtgag
    24841 catcgctaaa cgcccagtca tgatcggtga cggaatagtt ccactcaacg ccccgacgtt
    24901 gtaacagtgc acctttttcc tgcgccacat cagcaatggt agaaggcatt tccggctcac
    24961 cgacaattgc cggttttgcg ctgcgaaaga tgcctgcttt ctcgcgacca atactttcgc
    25021 gatctggtcc cagccagtcg gtatgatcca gcgcaatgct ggttactaca gccacatcgg
    25081 catcgacaat attggttgcg tccagacgac cgcccagccc tacttccaga atcactacgt
    25141 caagttgtgc ctgtttgaac agccacaacg ccgacagcgt accgtactcg aaataggtca
    25201 gggaaatatc accgcgtgcc gattcaatct ccgcaaaaga ggcggtgtgg gccgattccg
    25261 gcaattcctg cccctgcaca cgtacgcgct cggtataacg caccagatgc ggtgaactgt
    25321 agacgcccac tttgtaccct gccgccatca gaatcgactc cagcgtacgg caggtggtgc
    25381 ctttgccatt cgtacccgca acggtaaaca caaatggcgc tggtttcagg acgccaagac
    25441 gcgccgcgac ctggctcacg cgctcaaggc cgagatcgat agttttactg tgcaggtttt
    25501 ccagataaga aagccacgaa gccagaggcg acgcggcttg aggagtgcgt ttgataatca
    25561 tggtatccgc tgattcgtta cggtgagaat agcaaaaggg cagagccagt ggccctgccc
    25621 ttatcagtta tcaggcctca ggttcctgat ccggtaccgg gggtaccact acgccttcac
    25681 gcggcgcttc aggattcggc gctggcagat tcatcaactt cgccagaatg ctcgccagtt
    25741 tcaggcgcat ttccggacga cggacgatca tgtcgatcgc gcctttctcg atcaggaatt
    25801 cactgcgctg gaatccaggc ggcagttttt cgcgaacggt ctgttcgata acacgcggac
    25861 cggcaaagcc gattaacgct ttcggttcag cgatgttgag atcgcccagc atggcgaaac
    25921 ttgcagaaac accgcccatc gtcgggtcgg tcagcacgga gatgtacggc aagccgcgct
    25981 cctgcatttt tgccagtgcc gcagaggttt tcgccatctg catcagcgac atcagtgctt
    26041 cctgcatacg tgcgccacca gaggcggaga agcagatcag tgggcagtta tcttccagcg
    26101 cctgctcaac ggcacgcacg aaacgtgcac ccacaacaga ccccattgaa ccgcccataa
    26161 aggcgaactc gaatgccgca gcgacaaccg gcattccata cagagtgcct ttcatcacca
    26221 ccagcgcatc tttttcgcca gtttctttct gcgcagatgc cagacggtct ttatacttct
    26281 tggagtcacg aaacttcagc acatctttcg gctcaagctc gctacccagc tccacaaggc
    26341 ttccttcatc taacaggcta tgcaggcgat tacgcgctgt catacgcatg tgatggtcac
    26401 acttcggaca gacctcaaga ttacgttcca gctcagcgcg gtataaaacc tgaccgcagc
    26461 tatcacactt agtccacacc ccttcaggaa tgctcgcctt gcgggtggga gtaatgttgc
    26521 ttttaattcg ttcaatccag ctcattaggg acctttctgt ctgaacctgg ttcgatgcca
    26581 gttttatctt tggggacgca taatgccatt tttgccccca acagaccatg aatgttgcac
    26641 attaaaacat aacagcccga aactttggat aaaaaagtgg tcgaaccgcg gagttacttt
    26701 ttattttgcg gcgcgtgccg cagcgcgttt gtgacgaata aattcgaaaa ccccaggcaa
    26761 tattgaaaca aaaataatgc caacaatcat cagcttaagg ttgctctgaa tgaaggggag
    26821 cgtgccgaag aaataacccg cgtaggtaaa aatcagtacc cacaacagtg cgccgatcac
    26881 gttataagcg gcgaaatgac ggtacgacat gtggcccatt cccgcaacaa acggcgcgaa
    26941 cgttctgacg atcggtacaa aacgggcgag aataatcgtt ttgccgccat gtctctcgta
    27001 aaactgatga gtcttatcaa gataactgcg acgaaagatt ttcgaatccg ggttactgaa
    27061 cagtttgtca ccaaataacc gtccaatggt atagttcact gcatcaccga caatagcggc
    27121 aatcaacata agcaccacca tcatatggac attgagatcg ttagtttcca gcgacgccaa
    27181 tgccccagca acaaacagca gcgaatcacc aggcaggaat ggcgttacca ccagccccgt
    27241 ttcgcagaac agaatcaaaa acagaatggc ataaacccag acgccgtact ccgcgaccag
    27301 ctctgccaga tgcacgtcaa tgtgcaggat aaaatcgatg aggaaataaa tcaggtccat
    27361 atttgcctat gccttgtact cgtcatcttt caggctgtaa ctacgttggc tacagcctga
    27421 aatgttccga gcattattct cgttagtccg ccagaaatag cgggcccatt ggcggttttg
    27481 gaagatcata ccggtcaggg taatccaccg cgaccagata cagcccttcc gcttttgccg
    27541 ttgctgccgc cagcgttctg tcctttgccg ccagcaactc tgctatccag ctctccggct
    27601 ggttgtgggc accgacttcc atcaggctgc cgacaatatt cctgaccata tgatgtacaa
    27661 aggcattcgc tttgatatct accaccacat aaggaccgtg acgcgtgaca ttaatatgca
    27721 taacgttacg ccacggggtt cgggactggc actgcaccgc acggaacgag gtgaaatcat
    27781 tctcgcccag caagcattgc gcagcccgat gcatccgttc agcgtccagc ggttcgtaaa
    27841 aatgggttac ccctttactc agtaccgccg ggcgcagccg atgattgtag atgatgtagc
    27901 gataacggcg agccgtggcg ctaaatcggg catgaaaatc atcaggtaca gctttaaccc
    27961 aacgcacggc gatgtcacca ggtaaattcg catttacgcc caaggtccac gccgcgtctt
    28021 tgcgctgcgc ggttgtttcg aaatgcacca cttgcccggt accgtgtacc cctgcgtcag
    28081 tacgcccggc gcagaagacg gtgatgggtt cgttcgccac ctgggagagc gccttttcca
    28141 gcttctcctg cacactgcgg acttcattct gccgttgcca gccgtaatac ttactgccgt
    28201 cgtactcaat gcccagcgca attttataaa ctggcagttg ttgctggtcg gacattagta
    28261 cagatactcc tgcaccagtt tctcggcgat ttttactgcc atcagcgcgc cgccaaagcg
    28321 aacgttatcg gccaccgacc agaactggac ttgctccggc ataccgtagt cattacgcac
    28381 gcagccaaca gaaagatgcg gcgtacccga agcatcccct acctgagtcg ggaattcgtt
    28441 ctcttcagag agcacaatat cttcgccctg agcaaacgca tcacgcgctt cttctgccgc
    28501 cagcggacgc agtgcttcaa agttgaccat ctgggcatga ccgtagaata ccggtgcctg
    28561 gacgacgctt gccgaaatca tcagcccttc gtcctgcagg attttgcgta cttcgtcaac
    28621 gatacgacgt tcttcacgca cgctaccttc gctatccggc aacaacggca gcatattgaa
    28681 cgccagttga cgaccgaaga aatcttcttc gtcaatcgga atgccgttga gcaatttcgc
    28741 actctgcccc gctaacgcat cgaccgcttt tttgccctgg gcggaggctg aaatcaggct
    28801 ggtaacactg atacgcgaca aaccgccctg atcgattaac ggtttcagtg ccgccagcag
    28861 ctggctggtc agactgtctg gtacggcgat gacattccgg ttgcggtaat cggtcagtac
    28921 aaacgggttt acttccggca ccaccagcgg tacgtcgggt tcgagagcaa acagtccgct
    28981 gctgtcgatc accaggcaac ctgagttggt cgcttcttca acccaggcag cggtagcttc
    29041 tttgcctgcg acaaaaaatg ccagctgcgc ctgcgtccag tcgaattcag cggcatcctg
    29101 cacggtgatt gttttaccac caaagcgcag ttgttcgcct gcgctttcgt tacgtgccag
    29161 tgcataaatt tccccaaccg ggaactgacg ttcagccagc gtttcaagca gggcttcgcc
    29221 cacagcgcca gttgcgccca ggacggcaat gttccagcct tcagacatgg tggtttactc
    29281 cagaaatagc aaagctccct gccaatgtta cagcagagag catgaagaag agattaacgt
    29341 gccggatgat gaacggcgtt aaaacccagt ttacacagca atgatgccgc actggcgtca
    29401 tcacaaatta catacagaga tgaccattca cggcgctcaa gatagttttt gcgcagttta
    29461 tcgaactcac ccggtatccc ggcgacttta cgcagcggtg cgtcatcgcg gcgcacatca
    29521 tacaccaaat gcaccagcct tttcagcgtc ggttgatcga gcgggccatg cagcgtaatg
    29581 cgaccaaact ctggcgcggg cagtaatgta tccagcgcaa cgtgctgttc atgcccaata
    29641 aacttgctat aggcttcaaa cacttgcgta gtaccgcgtg ctttaccttc cagggtataa
    29701 cctgcgatat gcggcgtgcc gatatccact tttgtcagca actccacgtt aagttccggt
    29761 tcgccttccc agacatccag cactacgctt aacttctggc cttcattcag gcaggtcagc
    29821 aacgcagtat tatcgacgac tgcgccacgg caggcgttaa tcagaatcgc tcccggcttc
    29881 aggctacgga tcagtttttc atcccccaga tgcagcgttt tgtacggccc atctttgaag
    29941 agtggcgtat ggaaagtcag aatatccgca tgctgaacta attcatccag cgagcggaaa
    30001 tcaccctcat ccccacggtc agcgcgaggc ggatcgcaaa gcaatgtttt aatccctaac
    30061 gcttccagtc gcgcctgcaa tcgacgtcca acgttaccaa cgcccacgat ccccaccgta
    30121 cggtcgtgca gtgaaaatcc atcgcgttcg gcaagcatca gtagtgagga gaaaacatat
    30181 tccaccaccg caatcgcatt acagccaggt gcagcggaaa aaccaattcc cgcctgcttc
    30241 aaccatgctt catcgacatg gtcggtcccc gcagtggcag tgccaacaaa tttaatgggt
    30301 tttcctgcca gcaaagattc attcactttc gtgaccgaac gcaccatcag cgcatccgcg
    30361 tctgccagtt gagcaacggg gattggacgc ccgggaaccg cggtcacctc acccaaacgg
    30421 ctaaataagt cgcgggcata aggcatattt tcatcaacaa ggattttcac gtttgtgtta
    30481 cctgtatgag acgagagtta accggacaag tgtgccataa tctcgcggcc aggcatactt
    30541 gcgaagattt caggtataag gatacgtaat gatacaacct atttccggcc ctcctcctgg
    30601 gcaaccacca ggtcagggag ataacctgcc gtctggcgcg ggcaatcagc ctttatccag
    30661 tcagcaacgt acttcgctgg aaagcttaat gacgaaagtg acctcactga cgcaacaaca
    30721 aagagcagaa ctgtgggcgg gtatcaggca cgatattggt ctgtcgggag attcaccgct
    30781 gctttcgcgt cacttccctg ccgctgagca taatctggcg caacgtctgc tggccgcgca
    30841 aaaaagccat tctgcccgcc agcttttagc gcaattaggg gagtatttac gtctggggaa
    30901 taatcgtcag gcggtcacgg attatatccg tcataacttt ggtcagacgc cgctgaatca
    30961 gctctcaccg gagcaattaa aaaccattct caccctgttg caggaaggga agatggttat
    31021 tccgcaacca cagcagcgcg aggcgaccga ccgtccttta ttaccggcgg agcacaatgc
    31081 gctaaaacag ctggtgacca aacttgcggc ggcaacgggg gaacccagca aacagatctg
    31141 gcaatcgatg ctggaacttt ccggggtgaa agatggcgag ttaattccag cgaaactgtt
    31201 taaccatctg gtgacctggt tgcaggcgcg ccagacgtta agccagcaaa atacgccgac
    31261 gctggaatca ctacagatgg cgctaaaaca acctttagat gccagtgaac tggcggcgtt
    31321 atcggcatat atccagcaaa aatatggcct ttctgcgcaa tcatcgcttt cttctgccca
    31381 ggccgaggat attcttaatc agctttatca acggcgggtt aaagggattg atccgcgtga
    31441 tatgcaaccg ctgcttaatc cttttccacc gatgatggac acgttgcaaa atatggcaac
    31501 gcgtcccgcg ctgtggatac tgttagtcgc gattatcctg atgctggtct ggctggttcg
    31561 ttagccccga cgaaatgaca gtatcgtgac aataattccc agcaccgcag agatcgcccc
    31621 ggcaagaaat accgaagagt aaccaaacgt ggtcgccagc attcccgcca gcggcccgga
    31681 gacgccgagg gcgatatcct gaaacgcggc gtaaccgccc agtgcggtgc cgcgaacttg
    31741 tgaggggacg cgtttaacca cctccacgcc cagcgcagga aagataagcg aacatccggc
    31801 tccggttaac gccgcgcccg ctaatgcgac ccacgcacct ggggcttgcc agagcagcaa
    31861 caagcccacc gtttctacaa gcagagagac aatcgccact ttcacgccgc caaaacggtc
    31921 cggcatccag ccaatcatga cgcgcatcac gacaaatgcg ccgccaaacg cggtaagagt
    31981 aaagcccgcc atcgcccatc ctttgctggc aaagtagagc gaaacgaaag tcccgataac
    32041 cgcaaaacca acgccttgta gtgccagccc taaccctggt ttccagataa acccgacaac
    32101 gctccacagc gatggacgtt ctcccgccag ggccggtact ttgcgcactg tgccgttaca
    32161 ggcccacgcc agtaagggta ataccattgt ggtgatcgcc agtgcggcaa aaccgtaatg
    32221 gctatgaatc aacaggccaa gcggagcacc aacagcgagg gcaccgtaaa tcgccattcc
    32281 attccatgac atcactttgc cagagtgttt tggccctacg atgcctaacc cccaggtcag
    32341 agcgcctgtc agtaactggc tttcaccaaa cccaagaatc aaacgcccga tgaccaacag
    32401 ggcaaatttg aacggtgcgg agacaggcaa aatcgccgcc agcagcaacg cgccgccagc
    32461 cagaccacaa gctaacatcc cctgaagcgc cgaacgtttt gcaccatatt gatcggccag
    32521 tcgcccggca tagccacgcg tcagcaccgt agccagaaac tgaatcccga cggcaatccc
    32581 gaccatggta ttgccatagc ccagatcatg atgaacaaac agcgggataa ccggcaacgg
    32641 cagccctacg gtcatgtagg tgagaaaaac cgcaaaagcg atgcggaaga gcgaaaaatt
    32701 ggcagaagat cgtgtttcgg tttggcttac agcagtcatg cattactcca gaatgcagcg
    32761 caaggcgagg agtatccccg tctcatctct ctggtttcag ggttacagtg cgttggcagg
    32821 atttaacgcg tacgtctttt cagaaggaaa tcgacaaagc gggaagtttg cctggaactg
    32881 gcggcgattg tcaatgatgt gaaaaaggga accatcaggt tcccttttgc gttagtgccg
    32941 gaggccgcat tggcgcgtaa cgtcggatgc gacgctggcg cgtcttatcc gacctactcc
    33001 gactactccg acctactgcg aattaatctt tcagcttgcg cattaccagc gtggcgttgg
    33061 tgccgccgaa gccgaagctg ttagacataa cggtagtcag ttcgcgatcg gtcgtttcgg
    33121 tcacgatgtt cagacccgca gcctgctcgt ccagctcttc aatgttgatg ctcggggcga
    33181 taaagccgtg ttccagcatc agcagagagt agatagcttc ctgtacgcca gcagcgccca
    33241 gagagtgacc ggtcatggct ttggttgcag aaatcgccgg gctcttatcg ccgaacactt
    33301 cacggatagc tgccagttct ttcacgtcgc caaccggagt cgaagtacca tgagagttca
    33361 ggtaatcgat tggggtatca acgccgtgca tcgccatctt catgcagcgt actgcgcctt
    33421 cgccagacgg agcaaccatg tctgcaccat cagaggttgc gccgtagcca acgatttcag
    33481 catagatgtg agcaccacgc gccagcgcgt gttccagctc ttcaaccact accataccgc
    33541 cgccgccagc gataacgaaa ccgtcacggt gagcgtcgta agtacgggag gctttttccg
    33601 gggtgtcgtt gtatttagta gacagcgcac ccatcgcgtc gaattcgcag gccatttccc
    33661 agcacagctc ttcgccgccg ccagcaaaca cgatgtcctg tttgcccagt tggatctgct
    33721 ctactgcgtt accgatacag tgtgcggaag tcgcacacgc ggagctgatg gagtagttaa
    33781 cgccatgaat tttaaacggc gtggcgaggc aggcagaaac gccggatgcc atcgctttgg
    33841 tgaccacata cgggccaacc gctttcaggc cgcgcgggcc gcgcattgcg tcagcgccga
    33901 acacctggaa acgcggggaa ccgccgccag aacctgcaat caggccaacg cgcgggttat
    33961 tctggtaagc ttccggagaa aggcccgcat ctgcgattgc ctgctccata gaaaggaatg
    34021 cataaatgga tgcgtcgctc ataaagcgca caactttgcg gtcaatgagg ccagtggtat
    34081 ccagttttac gttgccccag acgtggctac gcatgccgga atccttcagc tcctgagaga
    34141 aagtgatccc tgaacgtcct tcacgcagag atgccaggac ttcctgctgg ttattaccga
    34201 tgctggaaac aatgcccagg ccagtaatca ctgcacgttt cattcaatac ctctgtaagt
    34261 cgcacataga gtaagtttcg aatgcacaat agcgtacact tgtacgccga acaagtccga
    34321 tcagccattt aatagagaaa tttgcgcagc cttacacaca tcgctaagat cgagccaccg
    34381 cctgtaagac gagtaactta cgtgaaacac tactccatac aacctgccaa cctcgaattt
    34441 aatgctgagg gtacacctgt ttcccgagat tttgacgatg tctatttttc caacgataac
    34501 gggctggaag agacgcgtta tgtttttctg ggaggcaacc aattagaggt acgctttcct
    34561 gagcatccac atcctctgtt tgtggtagca gagagcggct tcggcaccgg attaaacttc
    34621 ctgacgctat ggcaggcatt tgatcagttt cgcgaagcgc atccgcaagc gcaattacaa
    34681 cgcttacatt tcattagttt tgagaaattt cccctcaccc gtgcggattt agccttagcg
    34741 catcaacact ggccggaact ggctccgtgg gcagaacaac ttcaggcgca gtggccaatg
    34801 cccttgcccg gttgccatcg tttattgctc gatgaaggcc gcgtgacgct ggatttatgg
    34861 tttggcgata ttaacgaact gaccagccaa ctggacgatt cgctaaatca aaaagtagat
    34921 gcctggtttc tggacggctt tgcgccagcg aaaaacccgg atatgtggac gcaaaatctg
    34981 tttaacgcca tggcaaggtt ggcgcgtccg ggcggcacgc tggcgacatt tacgtctgcc
    35041 ggttttgtcc gccgcggttt gcaggacgcc ggattcacga tgcaaaaacg taagggcttt
    35101 gggcgcaaac gggaaatgct ttgcggggtg atggaacaga cattaccgct cccctgctcc
    35161 gcgccgtggt ttaaccgcac gggcagcagc aaacgggaag cggcgattat cggcggtggt
    35221 attgccagcg cgttgttgtc gctggcgcta ttacggcgcg gctggcaggt aacgctttat
    35281 tgcgcggatg aggcccccgc actgggtgct tccggcaatc gccagggggc gctgtatccg
    35341 ttattaagca aacacgatga ggcgctaaac cgctttttct ctaatgcgtt tacttttgct
    35401 cgtcggtttt acgaccaatt acccgttaaa tttgatcatg actggtgcgg cgtcacgcag
    35461 ttaggctggg atgagaaaag ccagcataaa atcgcacaga tgttgtcaat ggatttaccc
    35521 gcagaactgg ctgtagccgt tgaggcaaat gcggttgaac aaattacggg cgttgcgaca
    35581 aattgcagcg gcattactta tccgcaaggt ggttggctgt gcccagcaga actgacccgt
    35641 aatgtgctgg aactggcgca acagcagggt ttgcagattt attatcaata tcagttacag
    35701 aatttatccc gtaaggatga ctgttggttg ttgaattttg caggagatca gcaagcaaca
    35761 cacagcgtag tggtactggc gaacgggcat caaatcagcc gattcagcca aacgtcgact
    35821 ctcccggtgt attcggttgc cgggcaggtc agccatattc cgacaacgcc ggaactggca
    35881 gagctgaagc aggtgctgtg ctatgacggt tatctcacgc cacaaaatcc ggcgaatcaa
    35941 catcattgta ttggtgccag ttatcatcgc ggcagcgaag atacggcgta cagtgaggac
    36001 gatcagcagc agaatcgcca gcggttgatt gattgtttcc cgcaggcaca gtgggcaaaa
    36061 gaggttgatg tcagtgataa agaggcgcgc tgcggtgtgc gttgtgccac ccgcgatcat
    36121 ctgccaatgg taggcaatgt tcccgattat gaggcaacac tcgtggaata tgcgtcgttg
    36181 gcgaagcaga aagatgaggc ggtaagcgcg ccggtttttg acgatctctt tatgtttgcg
    36241 gctttaggtt ctcgcggttt gtgttctgcc ccgctgtgtg ccgagattct ggcggcgcag
    36301 atgagcgacg aaccgattcc gatggatgcc agtacgctgg cggcgttaaa cccgaatcgg
    36361 ttatgggtgc ggaaattgtt gaagggtaaa gcggttaagg cggggtaatc tgctctcgca
    36421 gtgtttgccg gatgcggcgt gaacgcctta tccgacctac gtgtgacgtg taggcctgat
    36481 aagacgcgat aagcgtcgca tcaggcatgg tgctccagac gccgcaactt actgctgtga
    36541 cgcctgctga aacaggtttt cccacatatc ggtcaccagc gcctggtcac gcggcgacaa
    36601 ttcaccggca ccaatggctt tttccagact ctggctaacg gtcgtatgca ccgcctgagc
    36661 ggagtggtca tcaccacttt ccagttctgc gatggctaat gtcaggtggc cacgcaaata
    36721 cccactggca aacaactcat catcactggc atggtcaacc ataccgtcga ttaatgccag
    36781 aatgcgtgat tcaaactccg cgatcatctt ctttcctcat tgtaaaacgt ggcgctggct
    36841 ttagttgagc gcttccggcc acgggaactg ttccgccgta agttccggcg tgtgataata
    36901 attttgtagt gctttaatga agcgtgccgg gcgttcagga atgccgtttg ctaggtaatc
    36961 catcacctgc gcatgtaccc gccgttgaaa caccacacga tccggttcga agtcgccttc
    37021 cagattgtcg caactgacgt taaacggata tcccgccgcc acacagaaca accagtcgag
    37081 tgcctgcggc ttcacttcaa catcttcaaa ctggctttgc gtttgggcat cacgcccatc
    37141 cgggcaatac cagtagccga aatcaaccag ctcacggcgc gcttttccgg caatacacca
    37201 gtgcgaaatc tcatgaattg cgctggcata aaagccgtgg gcaaagacaa ttcggttata
    37261 cggtacttcc gcatcagcag gaagatagat cggttcgtcg tcgcctttaa tcagacgggt
    37321 attaaattca tcggcaaagc agctattaaa aatttcaatc aactgctcat agtggtgtgt
    37381 actgttcatt agttcatccc caaccagtgg aggatctcct gtccgtggct atcgtaaagt
    37441 aatttggcac tcatcaccgc cgagacgata acaatcatcg ggcggatcag cttttgtcct
    37501 ttgctcaaca ccagccgtga acccatgcgc gcgccgagga actgccccac cagcatgaca
    37561 aagcccgtcg cccaaatcac tttgccgccg agaataaaca gcagcagacc gccaatgttt
    37621 gacgttgcgt tgagtaattt ggcgtgagcc gtggctttgg cgaggttgaa tccgcacagc
    37681 gtaacgaagg ccagcgcgta aaacgatccg gcagccgggc caaagaatcc gtcataaaaa
    37741 ccgacgcagc caccggcaat taacgcgaag ggcaaaccgt acatccggcg ctggcgatct
    37801 tcttcaccca gctttggcat cagcaagaaa tagaggccga tacaaatcac cagaatgggc
    37861 aaaatctgcc gtaagacatc agcctgaacg tattgcacca gcagtgcgcc gctcattgag
    37921 ccgataaagg tcatggcgat attgagtttc tgatcgctta aactaaccac tttgcggcga
    37981 ataaagtaga tagtggcgga aatagagccg ccgcaggctt gcagtttatt ggttgccagc
    38041 gcattagcgg gagacatccc tgccgccatc aatgccggaa tggtgagtaa cccaccgcca
    38101 ccggcaatcg agtcgataaa tcccgccagc atggcgacaa aaaagagaac acccagcaac
    38161 agcggggaaa ccataaacag gctattaaac gtttccatta gatcacgtgc tcatccagta
    38221 gcgcctggca ggaaggcggc aacggaggcg gtgtcttctt ctcaggcttt gttgttcccg
    38281 gttttggagg ttcaaaccag ctttgcagtt ctgccccgca accatcgcct ggtggcggta
    38341 aaggttgatc ttcacactcc agactatcgg caggacaacg taatcgtaca tgcatatgcg
    38401 cacgatgctg gaaccagggt cgcactttgc gcaaccagtc gcgatcggtg cccgcatcaa
    38461 ggcaaagttg ttgtttaatc gccggattaa caaaaatgcg cgtgacgtct ttgtcctggg
    38521 cggcgagttt gatcaagctg aaaatttctg gcttccacag cgtggagaca acgtgtttac
    38581 cgtcgcggga aactaagtcc agtgcttgcg ggcgcaagag ctgcgcggag gtccagcgag
    38641 ttttcggcag ttgcagaaag atatcgacat ccagtccggt ctggtggctg gcatgaccgc
    38701 cgttgaaacg cccaccagcg ggcatcccca tatcgccaat cagcaccgta cccatgccca
    38761 gattgctcac ctggctactc agacgctgga taaacatcac cagatccggg tgaccgaaat
    38821 agcgacgctg atcggtacgc atgacctgat aatgttcgga ctgtatcggc aacgtgtcag
    38881 cgccgacaat acagccatta gaaaaactgc ctatcgattg tgcgctaccc ggcacaggtt
    38941 gggttatttt ttgccacggc gtcgctgcca ggctagcgct actggcaagc agagccagca
    39001 gcgcaatcgc ggttttgttc attttttacc agcgtggaat atcagtcttc acatcggcat
    39061 tttgcgcccg ctgccgtaac aggtgatcca ttaaaacgat cgccagcatc gcttcagcga
    39121 tcggcactgc acggatcccg acacagggat cgtgacggcc tttggtgatc atctcaactt
    39181 cttcgccaaa gcggttaata gtgcgccccg gcacggtaat gctggaggtc ggtttcagcg
    39241 ccatatgagc aatgatttgc tgcccgctgc tgataccgcc gagaatgccg cccgcatggt
    39301 tgctctggaa accgtctttg gtgatttcgt cgcggttctg gctgccgcgc agcgccacta
    39361 cgtcaaagcc gtcgccaatt tccacgcctt tcaccgcgtt gatgctcatc agcgcatggg
    39421 cgatgtcggc atccaggcgg tcaaataccg gctcgccaag tccggcgggg acgccactgg
    39481 caacaacggt gactttcgcg ccgatggagt cgccctcttt tttcagcgcg cgcatcagtt
    39541 catctaacgc gtcgatttta tccgggtccg ggcagaagaa cggattttgt tcaacctgcg
    39601 accagtcttt gatttccagc ggaatgtcgc ccatctgggt caggcagccg cggatttcaa
    39661 taccaaattt ctcagcgaga tattttttgg caatcgcccc tgccgctacg cgcatggcgg
    39721 tttcgcgggc ggaagaacgt ccaccgccgc gataatcgcg cagtccgtat ttttgttcgt
    39781 aggtgtaatc ggcatggcct ggacggaaaa cgtccttaat cgcactataa tcctgagaac
    39841 gctggtcggt attttcgatc aacaagccaa tgctggtgcc agtagtaacg ccttcaaaaa
    39901 caccggagag aattttgacc tgatccggct cgcggcgctg ggtggtatag cgcgatgtcc
    39961 cagggcgacg acggtcgagg tcatgttgca ggtccgcttc cgtcagcgga atgcctggcg
    40021 gaacaccatc gacgatgcag ccgagcgcca gcccgtgcga ttcgccgaag gtggttacgc
    40081 gaaagagttg tccaattgtg tttccagcca tcacggctcc gttattgttg tgtttgcgtg
    40141 tttacttaat ctttataaat cgcgaaatgt tcacgggccg ccagcagctg ctctttggtg
    40201 agcataaaca caccatcgcc gccgttatca aactccagcc aggtgaacgg aacatccgga
    40261 tattgttcca taagatgtac catgctgttg ccgacttcac aaatcaacac gccatcatcc
    40321 gcaaggtaat ctgccgcgtt tccgagaatg cgacgcgtca gtttcaggcc gtcggtgcca
    40381 gatgccaggc ctagttccgg ctcgtgacgg tattcgtttg gcaggtcgga catatcttcc
    40441 gcatcgacat acggcgggtt agtgacaatc aggtcgtact gcactttcgg caagtcgcgg
    40501 aacagatcgg aacgaatcgg aatgacgttg tggatcagac cgtgttcttc gatgttctgt
    40561 tcagcaaccg ccagcgcgtc gggagagata tccaccgcgt cgacttccgc atccgggaag
    40621 gcataagcac aggcaatggc gatgcagccg ctaccggtac acatatctaa aatgtgctgc
    40681 ggttgcttgc tgatgagtcc ggcaaattta ttgttgatca gttcaccaat cggcgagcgc
    40741 ggcaccagca cgcgttcatc gacgtaaaat tcatgaccgc agaaccaggc tttgttggtc
    40801 aggtaagcca ccggaatgcg ctcgttgacg cggcggatca cgcgttcaac aatacggtgt
    40861 ttttcgctgg aggtcagacg cgcggtgcgc atatcttccg ggatatccag cggcagatag
    40921 agcgatggta acaccagctg tacggcttca tcccacgggt tatcggtgcc gtgaccgtac
    40981 cagatatttg ccgcgctgaa gcggcttacc gaccagcgca acatgtcctg aatggtttgc
    41041 agctcattta ctgcttcatc aacgaaaatt ttatccacgt attcctccag ggcatgatcg
    41101 caataatttc ggcggctagt ttgccatgaa gatgacgata aatcagcatt cacgcgcggt
    41161 gagtgaggaa aaatacgttt aaaacgatcg attgtgctac gagtcgggta aactgtagga
    41221 aaattagaaa tagagacaga taaatgaaaa agaaaacaac acttagcgag gaggaccagg
    41281 ctctgtttcg ccagttgatg gcggggactc gcaagattaa gcaggacacg attgtccacc
    41341 gaccgcagcg taaaaaaatc agcgaagtgc cggtgaaacg cttgatccag gagcaggctg
    41401 atgccagcca ttatttctcc gatgagtttc agccgttatt aaataccgaa ggtccggtca
    41461 aatatgttcg cccggatgta agccattttg aggccaagaa actgcgtcgc ggtgattatt
    41521 cgccggagtt gtttttggat ttacatggtc tgacgcagtt gcaggccaaa caggagttag
    41581 gcgcgttgat tgcagcctgc cgccgcgaac atgtgttttg cgcctgcgta atgcatgggc
    41641 acgggaagca tattttgaag caacaaacac cgctgtggct ggcgcaacat ccgcatgtca
    41701 tggcgtttca ccaggcacca aaagagtacg gtggtgatgc ggcgttgctg gtgttgattg
    41761 aagtggaaga gtggctgccg ccggagttgc cctgaatgct ggcagcaaat gccggatgca
    41821 gcgtaaacgc cttatccggc ctacaaatag gtgataattc aataaattgt aattcacttc
    41881 gtaggcctga taagacgcat cagagcaata ctacgaacta cagttcattc aatacatact
    41941 gaaaacgaca cgtcgaatca atcggttgcc cactactggt attcacattc accacaatat
    42001 cgtgtagtac tttatccgtt accggatgac gagttggcgt aaccgttacc gttgatttat
    42061 cacaaccgta agaggtaaag gttaacaatt ctgataccgc gcggcagtat gctcctctgc
    42121 catcattatc agaaaaatta ctgccatcac agagtctgcc gccttccatc aagtaggtcg
    42181 aaagcgtggt ggtcactgtt gaccccgtgg actgaattcg taacacctta ttatggctga
    42241 cataattttc actccaggag atatcgtatg aagcgaccgg tatcgttggg catattgtgt
    42301 tatgcactgt aggggccgta tagcttccaa atccgggtaa atctgtatag gaataaaagg
    42361 atgcgatcca agggcaacca taatcatcag atgcaacggt aattttaaac gtcatatatg
    42421 cacaacgaaa aattttcgta tctatgccag ggcaatttga gttattaatt gtatcaaagt
    42481 cagtcagtac caaagttgga gctgaacccg acccagacca ggaaataacc cgcaacgtat
    42541 cgcctttata cgcaaaagaa tcatatttcc catatgcaac ctcctttggc gttatcaccg
    42601 taacattgaa aacactgctc gctacagcac cggttacctt gtccatggca taataaactc
    42661 tcacactgtc aaaactcgca ctcataagtt tatctccagc ataactctta gatgcgccga
    42721 caacactcag aacgagcagc attaggctcg cgaaaattat ggtccatttt ttcatttcag
    42781 aaatactcaa aggttgccgt cactgtggca ctaaagtctc cggacgttac atctcgcccg
    42841 ctctttgcct gtaaccaggt attaaaattt aggctgttat ttccctgatt cagcgggagc
    42901 gtgacgcctg ttgtattgtt gattggcacc gatgtgcctg ccgcagtttc aataccaatc
    42961 ccagcgccgg atgctgatga cgaggagtca aaggccagaa agccgggtag agcactatct
    43021 tctgttcctg tcaacgttac tttgacatta aacaatgtag aactatgaca atctttcaat
    43081 tgaaacacca atggcactcg ctctgactgc ccaaggttca ttaaatcgct ggcggcaatg
    43141 gcaggaaaat gtacttctgc caactggcta ccattaatca ctggcgtaca cgatttactg
    43201 attaaattgc cggtaaagtg caaattatct cctgctattg tggttccact gcccagcaac
    43261 atcaggctac taataaaaaa caacgtacgc tttttcttca ttggtaatct acctgtaacg
    43321 tggcccaggc ctcaaagtcc gcctctggca gaacgacacc actctttttt actggcacag
    43381 ccgttaacac cggtaaatcg gtttcattca ccacaagtgg cgtattgatc gtaaaactct
    43441 gccctgcctg tttgagctga atgcctaaac cagtgatatt gctgcttact gcagcattat
    43501 caaaatcgct tggtgtgcca ctccagctca aggtcatttc cattaatggg tcgcgaaccg
    43561 ccgtatcgca ggtaatggaa tacgacacgg tttgctcata attgctgcca ttaatgtcat
    43621 caataagcac atcctgaaaa gttatttcaa tggtttgagc gttgctaatc gtgcagttag
    43681 gtggctgcac taaataaccg tgaaaagaga cgtttgagag tgccatcgag caaaagcccc
    43741 acagcaaaat aagcgagatc cgtttcattg gtaatccacc acaattgtgg cactggcgtt
    43801 aaattcagct gccgctaacg ttgtaccact ctgtttcacc ggcacagctt ccagaacggg
    43861 aactcccgag gaaaaattaa atggcaacca tgagccagag gttaagtcga gtattgtgtg
    43921 atcactactt ttctgaaccc gaataccaaa cccaggaatc cccgtgctga taactgtttc
    43981 accgttaatc acgaccgttg tcgcctgcat ctgtagacgc aggtcatcca ttgccagatt
    44041 gttacaaaca agcgagtagt caatgggacg tttataatca accccattga tcttattaat
    44101 gaatacatta ccaaactcaa ctgccgcacc atttaccgta caaggaggag gggcatcgac
    44161 aagcacccgt aaattcatac ttactgactt actcgctgca actgcaaagc cgctaccaac
    44221 acaacatatc agtaacccag ttaccgccca gacagaacaa gatcctttca tactggctct
    44281 cccggcctca gcctttgcgg ctctgctctt catcgacctg gcaactgtta ccgttgcaag
    44341 tgaaaaagag cggcatccga gcgccatagt cgttgacata ggtcagtacc ggcacgctac
    44401 ccatcttcac attcagcggt gcagaggttt tcggcgacat cactattggc gagaaaccgg
    44461 ctgccggatt gccatttttc tgtgtgctgg cattactgaa aatgacgtaa tacggtgtcg
    44521 ggttattgac ggtaaattcc tgaccgttgc gggttaaagt aaccttatat tgccaggggt
    44581 ttttcatgct gacgttctcc agcgccttcg gtcgccagaa caacttaata cgcgtttgta
    44641 gtgctatttg cagcgtgttg gctttgtttg attttggcgg gatctcacgc acgttgaagt
    44701 agaacaggct ttcacgatcg gcaggcaatt tgttgatatc cggcattccc tgcactttta
    44761 cctgcccgtt catcattgaa tcgatgcgtt gcaccggtgg cagaacagtt aacggtgaac
    44821 tgatcttgtt acccttttca tcttcgatcc agctttgggc cagataaggc agtttcggat
    44881 cgttattgcg caacgtcacg ctgattgatt tgtcgctttc attaaatatc aaacgggtac
    44941 gatctggcgt tacagaagcc tgggcagaca aactggcagc gctaagcagt aacgctagcg
    45001 tcgtagcacc caatttggca gagcaaagta aatcagacat ggatcattcc ttaatcacgt
    45061 tattggttag ctgaaacaga aacaggggga ttggtgggtg tcacctgttg cgtctgctcc
    45121 tgaatgacag gctttatgtc atcaggaaca accggcgcga cgttgccttt atgctggcat
    45181 ggcagtaaca agccgttaaa cagatcggca ggcagcgggt ccggcaggtt gatatcgcaa
    45241 tgcgcaacac cactccagaa cacactcatg tgttcgccag gtttcacccc agccagataa
    45301 acattgccgt catcatcgac aaggcccact gtctgctcgt tatcattttt tacttctgcg
    45361 ccaaacggag gatggctgcc gtcttgtaaa cgcagcaccg ccatcgcttt ttgaccactg
    45421 atgacggcaa atttgcggta gccaatcgcc ccttcagtta gcgtggcttg taccaccgac
    45481 tgggttgctt cggcgttttc cggcagtttg ttgaggtcga tatacgcctg attgcggtaa
    45541 tagttattga cgtcagaaac gacggcttta ccaaacatat tggtataaac agcagcaccg
    45601 ttaccttcta ccggaacatc ggcaacgcca tcggcatcaa tcaacaagcg tgtcccgccc
    45661 atattctggg tacggtgaag tgcgccaccg tgggcagtaa gcgttgcgcc gccctgtaac
    45721 gacaagcccg cagaggtgta ttgcccttca tggtagttcg cactgaggtc aacctgcgcc
    45781 agcgaaccat catggctgta atagccgtca acgctggtgt gtttgtcact ggtgccgacg
    45841 ttcaactgat agtgagtcgc gtcatcgaca cggctgaaat aaccgacctg actgctgtcc
    45901 gtcccactgc catagttacc gttatagcta acggtactgt tgtcgcccca cggcatactg
    45961 agcgaaatgt acatgccttt gtcggcctgg ttgtcatact cgtaacggta gccagtcatc
    46021 gagatgctga cattacgaat actgcccata ttgaaatagt gcgagagcat gatgttgtag
    46081 tttgtctgct cctcgcgatc ccagtaggta tggcgggtat agttgagata aaccgaaaca
    46141 cccgcatcgc ggaagttctg gttataagtg gcggtgtaca tctctttgtc gttgcccgtg
    46201 cgtaccattc cgctgtcact ggcatccaga tactcgctca tggtcataaa gttctcttcc
    46261 gagaagcgat atccagcaaa agtaacgcgg ctgttgagct ggtcaaagtc tttggaataa
    46321 ctcacacgga aggagttacc gtccagcgaa cctttgccat aagcggtgtc tttatccagt
    46381 ttggtgtgcg agtgagtaac atcaaacgcg accgcgccga atgtagacaa atcgcgaccg
    46441 acgccaagcg ccgcagactg atagttttca tctcccagtg cgccgccata taacgaccag
    46501 ccgttagcga tcccccagga agcttcagca ccagaaaaaa attcaccctc gacatggtgt
    46561 ccccactctt gcggacggcc catcatgatc ttatagcgaa cctgacctgg gcgagtgagg
    46621 tatggcatcg aggcggtgct gatgtcatat tcctgcacct ggccgttctg ttcttcaatg
    46681 cgaatatgca acgtaccgga gacagaatca ccaagatcct gaatacgaaa cggtccagcc
    46741 ggaacctgcg tttcgtaaat cacacgcccc atctggctga cggtcacttt tgctgtggtg
    46801 tgtgccacgc cggaaatgtc tggcgcgtag ccgcgcagat tgggaggcaa catttgatcg
    46861 tcagtactga cactgccacc aacatagtta aaaccatcaa aaatatcgga tctgaggtaa
    46921 tcctcgccca gcgccagttt ggcttttaat gatggtaacg cccgccaggc atagtagcga
    46981 ctccactccc attttttttg agtttcatcg ccgctgaatt catcgtcatc attactgcga
    47041 gtatgttgat agttagtctg ccagtcagca cgcatacgcc acggccccag gttaaccccg
    47101 accgtcccgt tgccgctgat ctcgttacta tcatcaccgc cattttcttc gtgccgggtt
    47161 tgtgcgttga tgctgtagtc cgcgacgatc ccggagatgc cgtcatccca acgtgaaggc
    47221 ggatcccagt cgggataagt atattcgagg taagcctgtg gcagtgaaat gactaatgcg
    47281 gactggctta aatcagcctt aatttccatg ccttccagtt gaccggattt caggcattta
    47341 gcatcgtggc tccattgcag attgttcgcc acgtcttctt ttaaaccaaa ctgcgctacc
    47401 agttccggtg tcagacaagc atagcttttg ctcgcgtcat cttcaccagc ataccagtaa
    47461 atatcgtact cttccgccaa tggctgttta tttagttgaa cctgtaaatt gtattttccg
    47521 ggctcaacat atccctggct ggaaaaacgc ttcagatcaa tttttgtgtc gccttttaat
    47581 tccagaaaac gggaatcaaa ctgaatgtcg tcttcagccc agacactgct ataactccct
    47641 gacattgcca gcgcaatgca ccacggaaga atccgtaatc gaaaaagaga atggtcaggc
    47701 atacacgttt ctatccgttt ttattcttgt tcggtcaaaa tccatttaaa tcccccatag
    47761 cagtgtcgct atgggggtat gccttacagg taagtaatct ggaaggtggt atttgcttcg
    47821 aaattaccca gatctggcgc atcagctgcg ccgaccagcc aggctttaaa gttcagtgtc
    47881 tgcttcgctt tgcctttatt ggtagaagtg tctttcacta ttttctggtc aatacccatg
    47941 ccgcttttgt aagaggtacc cagagagtca ccgatcgcca ggctaacatt gttaaatgcc
    48001 gcaccggtat cggtattgaa aatggtgtaa taattgccgc tatttgcaga agaaacggta
    48061 ccagtaaagg tagtggtcat tgtttcctga gtatcaaata cgcaatcttg cagacgaatc
    48121 tggaaacttt tcggcgtggt ggtgccgtta tttttcagtt tttcggcacc gatatcaccc
    48181 atatcaactt ccagtttgtg atcgtccgga acgatagaac acactgagtc ttcaatggtg
    48241 ccgtaaaaac gtgcagtacc gttgttaccc gcagcgattg ttgccgtaga ggtgaaaacg
    48301 cccatcacca ttgccgcagc aatagctgtt ttaacaaact t
//
LOCUS       DAPGWB010000015        46790 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.015, whole genome shotgun sequence.
ACCESSION   DAPGWB010000015 DAPGWB010000000
VERSION     DAPGWB010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 46790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 46790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..46790
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.015"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(337..879)
                     /locus_tag="RHX79_000874"
     CDS             complement(337..879)
                     /locus_tag="RHX79_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV2196079.1"
                     /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQ
                     HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKI
                     DRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQT
                     HKFKNISPHLQRIKAFKTLG"
     gene            complement(902..1927)
                     /gene="nagZ"
                     /locus_tag="RHX79_000875"
     CDS             complement(902..1927)
                     /gene="nagZ"
                     /locus_tag="RHX79_000875"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HDV2196080.1"
                     /translation="MGPVMLDVKGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRE
                     LVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGW
                     LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKT
                     TGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSD
                     VDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMI
                     LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERW
                     QEEKAGH"
     gene            complement(1938..2762)
                     /gene="thiK"
                     /locus_tag="RHX79_000876"
     CDS             complement(1938..2762)
                     /gene="thiK"
                     /locus_tag="RHX79_000876"
                     /EC_number="2.7.1.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine kinase"
                     /protein_id="HDV2196081.1"
                     /translation="MPFRSNNPIMRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQ
                     RFVVRQPHDPDAPQSAFLRQYRALSQLPASIAPKPHLYLRDWMVVDYLPGAVKTYLPD
                     TNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKVREPRP
                     LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYA
                     TRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ"
     gene            complement(2743..3384)
                     /gene="lpoB"
                     /locus_tag="RHX79_000877"
     CDS             complement(2743..3384)
                     /gene="lpoB"
                     /locus_tag="RHX79_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HDV2196082.1"
                     /translation="MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQ
                     PVPTVPSVPTIPQQPGPIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSV
                     LLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGT
                     RSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ"
     gene            complement(3398..3775)
                     /locus_tag="RHX79_000878"
     CDS             complement(3398..3775)
                     /locus_tag="RHX79_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDV2196083.1"
                     /translation="MRKGCFGLVSLALLLLVGCRSHPEIPVNDEQSLVMESSLLAAGI
                     SAEKPVLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVSIPAH
                     SAVTLYGSANFLGAHKVRLYLYL"
     gene            complement(3778..4137)
                     /gene="hinT"
                     /locus_tag="RHX79_000879"
     CDS             complement(3778..4137)
                     /gene="hinT"
                     /locus_tag="RHX79_000879"
                     /EC_number="3.9.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine nucleoside phosphoramidase"
                     /protein_id="HDV2196084.1"
                     /translation="MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIP
                     NILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM
                     HLLGGRPLGPMLAHKGL"
     gene            4471..6660
                     /gene="fhuE"
                     /locus_tag="RHX79_000880"
     CDS             4471..6660
                     /gene="fhuE"
                     /locus_tag="RHX79_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric-rhodotorulic acid/ferric-coprogen
                     receptor FhuE"
                     /protein_id="HDV2196085.1"
                     /translation="MLSTQFNRDNQYQASTKPSLLAGCIALALLPSAAFAAPATEETV
                     IVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVM
                     ENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV
                     VRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDG
                     KIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWG
                     GLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVE
                     FDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYEL
                     FGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTT
                     HMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWST
                     YASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVAQ
                     STGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVN
                     PNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLF
                     TRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGAPRNFSITGTYQF"
     gene            complement(6720..8153)
                     /gene="ptsG"
                     /locus_tag="RHX79_000881"
     CDS             complement(6720..8153)
                     /gene="ptsG"
                     /locus_tag="RHX79_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000475716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIBC"
                     /protein_id="HDV2196086.1"
                     /translation="MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV
                     SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH
                     LPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA
                     AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF
                     QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPEN
                     RAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDG
                     TSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATED
                     AKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVV
                     AGSGVQAIFGTKSDNLKTEMDEYIRNH"
     gene            complement(8448..9245)
                     /locus_tag="RHX79_000882"
     CDS             complement(8448..9245)
                     /locus_tag="RHX79_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDV2196087.1"
                     /translation="MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL
                     PGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYT
                     PETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED
                     RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE
                     NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR"
     gene            complement(9256..10260)
                     /gene="holB"
                     /locus_tag="RHX79_000883"
     CDS             complement(9256..10260)
                     /gene="holB"
                     /locus_tag="RHX79_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDV2196088.1"
                     /translation="MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYAL
                     SRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNMLGIDAVREVTEKLNE
                     HARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR
                     LHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ
                     ALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE
                     LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
                     "
     gene            complement(10257..10898)
                     /locus_tag="RHX79_000884"
     CDS             complement(10257..10898)
                     /locus_tag="RHX79_000884"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDV2196089.1"
                     /translation="MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGT
                     QLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHD
                     LSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIE
                     QESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA"
     gene            complement(10888..11910)
                     /gene="yceG"
                     /locus_tag="RHX79_000885"
     CDS             complement(10888..11910)
                     /gene="yceG"
                     /locus_tag="RHX79_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YceG"
                     /protein_id="HDV2196090.1"
                     /translation="MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTL
                     KPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLL
                     ESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW
                     FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKE
                     TAVASERDQVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTI
                     TGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVL
                     KEKNAQ"
     gene            complement(11913..12722)
                     /gene="pabC"
                     /locus_tag="RHX79_000886"
     CDS             complement(11913..12722)
                     /gene="pabC"
                     /locus_tag="RHX79_000886"
                     /EC_number="4.1.3.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate lyase"
                     /protein_id="HDV2196091.1"
                     /translation="MFLINGYKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQ
                     RLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATR
                     ILSVTAYPAHYDRLRNEGMTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
                     EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVE
                     VQASLEEALQADEMVICNALMPVMPVRACGDVSFSSATLYEYLAPLCERPN"
     gene            complement(12842..14083)
                     /gene="fabF"
                     /locus_tag="RHX79_000887"
     CDS             complement(12842..14083)
                     /gene="fabF"
                     /locus_tag="RHX79_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDV2196092.1"
                     /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS
                     AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIG
                     AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI
                     ATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA
                     ASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPEN
                     GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSS
                     TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGME
                     YTLCNSFGFGGTNGSLIFKKI"
     gene            complement(14171..14407)
                     /gene="acpP"
                     /locus_tag="RHX79_000888"
     CDS             complement(14171..14407)
                     /gene="acpP"
                     /locus_tag="RHX79_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV2196093.1"
                     /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV
                     MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA"
     gene            complement(14618..15352)
                     /gene="fabG"
                     /locus_tag="RHX79_000889"
     CDS             complement(14618..15352)
                     /gene="fabG"
                     /locus_tag="RHX79_000889"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDV2196094.1"
                     /translation="MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA
                     ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE
                     WNEIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG
                     FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANA
                     VAFLASDEAAYITGETLHVNGGMYMV"
     gene            complement(15365..16294)
                     /gene="fabD"
                     /locus_tag="RHX79_000890"
     CDS             complement(15365..16294)
                     /gene="fabD"
                     /locus_tag="RHX79_000890"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDV2196095.1"
                     /translation="MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDL
                     WALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCA
                     GVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVN
                     FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK
                     ITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVG
                     PGKVLTGLTKRIVDTLTASALNEPSAMAAALEL"
     gene            complement(16310..17263)
                     /gene="fabH"
                     /locus_tag="RHX79_000891"
     CDS             complement(16310..17263)
                     /gene="fabH"
                     /locus_tag="RHX79_000891"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDV2196096.1"
                     /translation="MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI
                     AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG
                     CPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDG
                     AGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVT
                     ELAHIVDETLTANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS
                     AASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF"
     gene            complement(17331..18401)
                     /gene="plsX"
                     /locus_tag="RHX79_000892"
     CDS             complement(17331..18401)
                     /gene="plsX"
                     /locus_tag="RHX79_000892"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415608.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDV2196097.1"
                     /translation="MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDA
                     ITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRVALELVKEGRAQAC
                     VSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQ
                     FAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEAN
                     ELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKS
                     LTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAA
                     RLESVYPAGFELLDGGKSGTLR"
     gene            complement(18482..18655)
                     /gene="rpmF"
                     /locus_tag="RHX79_000893"
     CDS             complement(18482..18655)
                     /gene="rpmF"
                     /locus_tag="RHX79_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDV2196098.1"
                     /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT
                     ADGYYRGRKVIAK"
     gene            complement(18707..19228)
                     /gene="yceD"
                     /locus_tag="RHX79_000894"
     CDS             complement(18707..19228)
                     /gene="yceD"
                     /locus_tag="RHX79_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001174481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HDV2196099.1"
                     /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD
                     VECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEAL
                     PEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEAQK
                     PNPFAVLASLKRK"
     gene            19427..20011
                     /gene="yceF"
                     /locus_tag="RHX79_000895"
     CDS             19427..20011
                     /gene="yceF"
                     /locus_tag="RHX79_000895"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-methyl-GTP pyrophosphatase"
                     /protein_id="HDV2196100.1"
                     /translation="MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQL
                     VLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTF
                     YTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITL
                     FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG"
     gene            complement(20123..21082)
                     /gene="rluC"
                     /locus_tag="RHX79_000896"
     CDS             complement(20123..21082)
                     /gene="rluC"
                     /locus_tag="RHX79_000896"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HDV2196101.1"
                     /translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK
                     GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI
                     LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL
                     RSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSET
                     RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTG
                     LNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR"
     gene            21655..24840
                     /gene="rne"
                     /locus_tag="RHX79_000897"
     CDS             21655..24840
                     /gene="rne"
                     /locus_tag="RHX79_000897"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HDV2196102.1"
                     /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG
                     KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV
                     QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL
                     PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAF
                     RDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE
                     SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL
                     RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL
                     SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY
                     LLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEE
                     AMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAATATPASPA
                     QPGLLSRFFGALKALFSGGEETKPAEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRD
                     TRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTADEQQAPRRERSRR
                     RNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAV
                     VAPVVEETVAAEPIVQETPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRS
                     RRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQV
                     EEQREQEEVQVQPMVTEVPVAAAVEPVVSAPVVEEVAEVVEAPVQIAEPQPEVVETTH
                     PEVIAAAVTEQPQVITESDVAVAQEVAEHAEPVVEPQEETADIEEVAETAEVVVAEPE
                     VVAQPAAPVVAEVAAEVETVAAVEPEITVEHNHATAPMTRAPAPEYVPEAPRHSDWQR
                     PTFAFEGKGAAGGHTATHHASAAPARPQPVE"
     gene            complement(25037..25990)
                     /gene="flgL"
                     /locus_tag="RHX79_000898"
     CDS             complement(25037..25990)
                     /gene="flgL"
                     /locus_tag="RHX79_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HDV2196103.1"
                     /translation="MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPI
                     AASQAVVLSQAQAQNSQYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTL
                     SDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESI
                     KQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADS
                     EADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMS
                     DLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLNK"
     gene            complement(26002..27645)
                     /gene="flgK"
                     /locus_tag="RHX79_000899"
     CDS             complement(26002..27645)
                     /gene="flgK"
                     /locus_tag="RHX79_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HDV2196104.1"
                     /translation="MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQA
                     NSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTS
                     TSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI
                     AIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVS
                     VQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLN
                     TGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNSQHKAGFDANGDAGEDFFAIGKPA
                     VLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKV
                     AFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEEDAGDSDNRNGQ
                     ALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSTTQGNVVTQLSNQQQSIS
                     GVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR"
     gene            complement(27711..28652)
                     /gene="flgJ"
                     /locus_tag="RHX79_000900"
     CDS             complement(27711..28652)
                     /gene="flgJ"
                     /locus_tag="RHX79_000900"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly peptidoglycan hydrolase FlgJ"
                     /protein_id="HDV2196105.1"
                     /translation="MISDSKLLASAAWDAQSLNELKAKAGEDPAANIRPVARQVEGMF
                     VQMMLKSMRDALPKDGLFSSEHTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTPEQ
                     PLPEESTPAAPMKFPLETVVRYQNQALSQLVQKAVPRNYDDSLPGDSKAFLAQLSLPA
                     QLASQQSGVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITT
                     TEYENGEAKKVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQGAQALQDAG
                     YATDPHYARKLTNMIQQMKSISDKVSKTYSMNIDNLF"
     gene            complement(28652..29749)
                     /gene="flgI"
                     /locus_tag="RHX79_000901"
     CDS             complement(28652..29749)
                     /gene="flgI"
                     /locus_tag="RHX79_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415598.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HDV2196106.1"
                     /translation="MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVG
                     LDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQT
                     IDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQL
                     NGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDA
                     RTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVA
                     QGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRA
                     LNALGATPMDLMSILQSMQSAGCLRAKLEII"
     gene            complement(29761..30459)
                     /gene="flgH"
                     /locus_tag="RHX79_000902"
     CDS             complement(29761..30459)
                     /gene="flgH"
                     /locus_tag="RHX79_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HDV2196107.1"
                     /translation="MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPT
                     PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKT
                     NFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
                     LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQN
                     MGWLQRFFLNLSPM"
     gene            complement(30512..31294)
                     /gene="flgG"
                     /locus_tag="RHX79_000903"
     CDS             complement(30512..31294)
                     /gene="flgG"
                     /locus_tag="RHX79_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HDV2196108.1"
                     /translation="MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDL
                     LYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGF
                     FQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT
                     QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGY
                     VETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL"
     gene            complement(31432..32187)
                     /gene="flgF"
                     /locus_tag="RHX79_000904"
     CDS             complement(31432..32187)
                     /gene="flgF"
                     /locus_tag="RHX79_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgF"
                     /protein_id="HDV2196109.1"
                     /translation="MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV
                     PVEGLSLPTRTLVTASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRN
                     GSIQVDPTGQLTIQGHPVIGEAGPIAVPEGAEITIAADGTISALNPGDLANTVAPVGR
                     LKLVKATGSEVQRGDDGIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMS
                     DMIASARRFEMQMKVISSVDDNAGRANQLLSMS"
     gene            complement(32207..33412)
                     /gene="flgE"
                     /locus_tag="RHX79_000905"
     CDS             complement(32207..33412)
                     /gene="flgE"
                     /locus_tag="RHX79_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDV2196110.1"
                     /translation="MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA
                     GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL
                     DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS
                     SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP
                     TGTAEPAMKLVFNANGVLTSNPTENITTGAINGADPATFSLSFLNSMQQNTGANNIVA
                     TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA
                     TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ
                     ILNTLVNLR"
     gene            complement(33437..34132)
                     /gene="flgD"
                     /locus_tag="RHX79_000906"
     CDS             complement(33437..34132)
                     /gene="flgD"
                     /locus_tag="RHX79_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
                     /protein_id="HDV2196111.1"
                     /translation="MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLK
                     NQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMI
                     PGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVH
                     SFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGT
                     YGTTTLDEVRQII"
     gene            complement(34144..34548)
                     /gene="flgC"
                     /locus_tag="RHX79_000907"
     CDS             complement(34144..34548)
                     /gene="flgC"
                     /locus_tag="RHX79_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HDV2196112.1"
                     /translation="MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRA
                     KQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEM
                     VNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ"
     gene            complement(34552..34968)
                     /gene="flgB"
                     /locus_tag="RHX79_000908"
     CDS             complement(34552..34968)
                     /gene="flgB"
                     /locus_tag="RHX79_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HDV2196113.1"
                     /translation="MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDID
                     FASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDM
                     DRERTQFADNSLQYQMSLSALSGQIKGMMNVLQSGN"
     gene            35123..35782
                     /gene="flgA"
                     /locus_tag="RHX79_000909"
     CDS             35123..35782
                     /gene="flgA"
                     /locus_tag="RHX79_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HDV2196114.1"
                     /translation="MLTIKRSVAIIAILFSPLSTASNLTSQLHNFFSAQLAGVSDEVR
                     VSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAM
                     PIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAW
                     RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILIN
                     L"
     gene            35858..36151
                     /gene="flgM"
                     /locus_tag="RHX79_000910"
     CDS             35858..36151
                     /gene="flgM"
                     /locus_tag="RHX79_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-28 factor FlgM"
                     /protein_id="HDV2196115.1"
                     /translation="MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLS
                     DAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN"
     gene            36156..36572
                     /gene="flgN"
                     /locus_tag="RHX79_000911"
     CDS             36156..36572
                     /gene="flgN"
                     /locus_tag="RHX79_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FlgN"
                     /protein_id="HDV2196116.1"
                     /translation="MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITE
                     QKSSLLATLDYLEQLRKKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIE
                     RNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI"
     gene            complement(36612..38147)
                     /gene="murJ"
                     /locus_tag="RHX79_000912"
     CDS             complement(36612..38147)
                     /gene="murJ"
                     /locus_tag="RHX79_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706990.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDV2196117.1"
                     /translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA
                     FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAG
                     MLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIP
                     AFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPR
                     INFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPS
                     GVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTV
                     SLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI
                     LTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVV
                     AVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFAR
                     RTV"
     gene            complement(38257..39180)
                     /locus_tag="RHX79_000913"
     CDS             complement(38257..39180)
                     /locus_tag="RHX79_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDV2196118.1"
                     /translation="MKKLRIGVVGLGGIAQKAWLPVLAAASDWMLQGAWSPTRAKALP
                     ICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRD
                     AERLVELAARKKLTLMVGFNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFT
                     LLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAG
                     SQRETVQAVTDGALIDITDMREWREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIEC
                     VQNQTVPQTAGEQAVLAQRIVDKIWRDAMSE"
     gene            complement(39182..39829)
                     /locus_tag="RHX79_000914"
     CDS             complement(39182..39829)
                     /locus_tag="RHX79_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceH family protein"
                     /protein_id="HDV2196119.1"
                     /translation="MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR
                     EPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL
                     ITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRE
                     SRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD"
     gene            complement(39840..40424)
                     /gene="rimJ"
                     /locus_tag="RHX79_000915"
     CDS             complement(39840..40424)
                     /gene="rimJ"
                     /locus_tag="RHX79_000915"
                     /EC_number="2.3.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S5-alanine
                     N-acetyltransferase"
                     /protein_id="HDV2196120.1"
                     /translation="MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKP
                     WEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSF
                     HACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLG
                     FEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR"
     gene            40660..41868
                     /gene="mdtH"
                     /locus_tag="RHX79_000916"
     CDS             40660..41868
                     /gene="mdtH"
                     /locus_tag="RHX79_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtH"
                     /protein_id="HDV2196121.1"
                     /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA
                     AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL
                     WFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ
                     YDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLA
                     GYYMLAVQVMLMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHR
                     LMAGLLIMSLSMMPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSY
                     MGFSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKR
                     AARRLLERDA"
     gene            41932..42579
                     /gene="grxB"
                     /locus_tag="RHX79_000917"
     CDS             41932..42579
                     /gene="grxB"
                     /locus_tag="RHX79_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 2"
                     /protein_id="HDV2196122.1"
                     /translation="MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVG
                     QKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLL
                     PRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVK
                     PNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI"
     gene            42713..43273
                     /locus_tag="RHX79_000918"
     CDS             42713..43273
                     /locus_tag="RHX79_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV2196123.1"
                     /translation="MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSK
                     DIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALP
                     VFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
                     QGEAMAKKLAKGIEVKPGEIVIPFTD"
     gene            43379..44425
                     /gene="pyrC"
                     /locus_tag="RHX79_000919"
     CDS             43379..44425
                     /gene="pyrC"
                     /locus_tag="RHX79_000919"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDV2196124.1"
                     /translation="MTAPSQVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMP
                     NLAPPVTTVEAAVAYRQRILDAVPAGHNFTPLMTCYLTDSLDPNELERGFNEGVFTAA
                     KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIES
                     VMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRP
                     HLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL
                     GSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLV
                     PFLAGETVRWSVKQ"
     gene            44499..44744
                     /gene="dinI"
                     /locus_tag="RHX79_000920"
     CDS             44499..44744
                     /gene="dinI"
                     /locus_tag="RHX79_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein I"
                     /protein_id="HDV2196125.1"
                     /translation="MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY
                     AAANNLSVIGATKEDKQRISEILQETWESADDWFVSE"
     gene            45034..45288
                     /gene="bssS"
                     /locus_tag="RHX79_000921"
     CDS             45034..45288
                     /gene="bssS"
                     /locus_tag="RHX79_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309465.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssS"
                     /protein_id="HDV2196126.1"
                     /translation="MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGT
                     EVGQTLWLTTDVARQFISILEAGIAKIESGDFPVNEYRRH"
     gene            45403..46521
                     /gene="solA"
                     /locus_tag="RHX79_000922"
     CDS             45403..46521
                     /gene="solA"
                     /locus_tag="RHX79_000922"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HDV2196127.1"
                     /translation="MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHH
                     GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADSAFLAN
                     VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK
                     EAGCAQLFNCPVTAIRHDDDGVTIETVDGEYQAKKAIVCAGTWVKDLLPELPVQPVRK
                     VFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERV
                     PFAEVVSDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITG
                     LSGHGFKFASVLGEIAADFAQDKKSDFDLTPFRLSRFQ"
     gene            46569..46682
                     /locus_tag="RHX79_000923"
     CDS             46569..46682
                     /locus_tag="RHX79_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceO family protein"
                     /protein_id="HDV2196128.1"
                     /translation="MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF"
BASE COUNT        11343 a        12578 c        11626 g        11243 t
ORIGIN      
        1 ttacagcaat gaaaatgttc ttcgctattg agaataacat gaatggtgca ttggtcatac
       61 caaaattgat gttaatcaag ttttgttgct gaaaagatag gcgactttac cgggtgagat
      121 caaaaaatag agtttattgt ttattatttg agcaaattcg gaagagtaat atagggtgaa
      181 gcgtatatcg agggcgtttg gtcgtcctga taagatgcgc agcatcgcat caggcattga
      241 tgctcgactg tcggatgcgg cgtggacgcc ttatccgact tacagaattc ggagcgcatc
      301 aggtaccggc aaggttacct gatgcgacga gggcatttac ccgagggttt tgaacgcttt
      361 aatgcgctgt aaatgcgggg agatattctt gaatttgtgc gtctgctctt cgtcccagac
      421 aatctcgtaa taatgatgca actcttcaga tgtccgctgg ctgttaagtg cttcatcatt
      481 acgcgacaaa ataaccagac aacgatcgcg attcttctcg cggaagttgg tcacacactt
      541 agtggcaata tcggcatact cttccgggcg atcaatcttg ccttccatgt tctcataagg
      601 gaacaaatta gggttgaaga tcacctggcg gatgtcgcaa agaaaaccaa tccgttccgc
      661 ccagtatccg cccaggccaa cgccgcaaat tagcggacgc tcgtcaacgt tcagttgcaa
      721 cattttgtcc acttctttaa gcagatgctg catatcatgt ttcggatgcc gcgtactgta
      781 gcttatcaag cgtacatccg ggtcaataaa ctgcaattgt aagactttct cgtggttacc
      841 cggactgtta gagtcaaaac cgtgtaaata gataatcatc gcttcctcac ataagccagg
      901 gttagtgacc tgctttctct tcctgccagc gttcgtgtaa ctgattcaga cgggtgctga
      961 tcgctttcca gcgagccgag tccatcagtt cctgtcgcga aaatgaacct ttatgataca
     1021 aacgtgtaac acgttctgcc ttgatcggtg acagattatc taacacgctg acggcccctt
     1081 tacgattatt gcagaccagg atcatatcgc aacccgcatc cagtgatgcc tgcccgcgtt
     1141 cggcataact gcccataatc gcggcacctt ccatcgataa atcgtcagag aaaatcacgc
     1201 cgtcaaaacc cagttcctga cgcaaaacgg ttttcagcca gtagggagaa ccgctcgccg
     1261 gacgcggatc aacatcactg tagatcacat gcgcaggcat aatggcgtcg agtttatttt
     1321 cgcggattaa ggaactgaag accgacatat ctttagcgcg aatctccgct tgtggacgtg
     1381 gatcgcacgg tgtttctttg tgtgagtctg ccgttactgc accgtgtcct gggaagtgtt
     1441 tcccggtcgt tttcattccg gcttcatgca taccatcaat aaaccggctg gcaattgcca
     1501 gggctttttg tggatcggca tgataagaac gctcgccaat cgccgcgctg atatgcccga
     1561 catccagcac tggcgcaaag ctgatatcaa tatccatagc gatcatttcg ctggccatca
     1621 gccaacccgc ctcttgcgcc agtttgccgc cctcttccat tcctgacagc gcagcgaatg
     1681 attgcgccgc tggcaagcgg gtaaaacctt cacgaaaacg ctgcacgcgt ccaccttcct
     1741 gatctaccgc caccaccaga tgattgcgcg aagctgcgcg gatctggcgc accagttcac
     1801 gtaactgggc aggatcatga tagttacgcg taaagagaat cagccctccc accagcggat
     1861 gcgcaagtat ttcacgctct tccgcgtcca gttcgtaacc tttgacatcc aacattactg
     1921 gacccacact gctctcctta ttgttttatt aatagctgcc gccaggtgtc atcggccagc
     1981 ctgataaatt gttgatcgcc ggtttgtcgc cagcggtact caaaccaccc tgctttgagc
     2041 atcagcagcc agggaaacca tcgcctgacc tgacgccata attgcgccgg ataaatcttc
     2101 gcgcgagtgg catagtcatt gaccaattgc cggtgctgtt cagtattttc cacccacacc
     2161 gccgccagtt ccagcgcgat atcaccatct ccggcatact cccagtcgat gagttttaac
     2221 cctgacgcgc tatgcactaa atttccggcg tggacatcca tatgcaatgg acttaagcgt
     2281 aaaggccgtg gttcccgcac tttgcgcaga cgttttaaca ttcgcagcca acccactgtc
     2341 cgccgcgccg gatcgctttg ctgccagtac agttccagta acggcaacag cgttattcgc
     2401 cagccaaaac gtggttgttg atgtagataa tacagcaagc ctgccagttc gttggtatcc
     2461 ggcaaatacg tttttaccgc gccgggcaga tagtcgacta ccatccagtc acggagatat
     2521 aaatgcggct tcggtgcaat gcttgcgggt agttgtgata aagcccgata ctggcgcaag
     2581 aacgcggact gcggcgcatc aggatcgtgc ggctgacgca caacaaaacg ctggccctga
     2641 tgttcaatga gaaaactccc gccactaagc ccactattaa acgtcgtgac gggatgaaac
     2701 tgcgggaaaa agcgcgacag caattcgtcg cgcatgatgg gattattgct gcgaaacggc
     2761 acctttacct gaccagataa tttcgcccgt ctgcaccagc atcagctgca tttgtagggt
     2821 cggagcgtta acgttgccag aggcgctgga gtacagcacg taatgagcgc cgacattgcg
     2881 ggcaatgcct atggctttac tacgggtacc taaactgtcc tgcggcgaca aacctaactg
     2941 ttgcttagcc atcgacagct gctgggcgga aaccagggta aatttcccgt tattagccag
     3001 cgcatttcgc agcgtttcgg tcgcttctgc ggcattcagc gaaccgttag tacggttgtt
     3061 aacgctatca accagcagga cgctacccgc agtcaccccg tcagccccaa gcatcttact
     3121 gaccatcggc tgcattgcgc cattccagtc ataatggcga atatgcggcg caggcggtgc
     3181 cgtttgatct tcgtgctcaa ttgggcctgg ctgctgcggg atcgtcggca ccgagggcac
     3241 tgtggggaca ggctgttgtg gctcggctgg ttgttccggc gctggtttca cttcttctac
     3301 cggtgcaggt tcacgttgcc ccacacaccc ggcgagaaac atcgccagcg cggtaatcaa
     3361 ggcgtagcga ctcatttttg tcatcaagat tcacccctta caaatataga taaagtctga
     3421 ctttgtgcgc ccccagaaaa ttggcgctgc cgtacagcgt taccgccgaa tgtgcgggaa
     3481 tgctaacgct gcgtggcctt tccagaggat gcatctccag ccctctggcg tcataccagt
     3541 aaaaacgata atgaacggta acgggttctt gcctttcgtt ataaagcgtt gaggatgctg
     3601 aaggttgaat atcagacgtc gaaaggacgg gcttttctgc actgatgccc gcagccaata
     3661 aagatgactc catcaccagc gattgctcat cattcaccgg aatttccgga tgtgaacgac
     3721 agcccaccag cagtaacaac gccagagaca ccagcccaaa gcatcctttt ctcatcgtta
     3781 cagaccttta tgcgccagca ttggtcccag cggacggcca cccaacaagt gcatatggat
     3841 gtggtaaacc tcttgtccgc catggcggtt ggtattcatg atcagacgat agccatcttc
     3901 ggcaatacct tcttgctcag caatttttgc cgctacggtg atcatgcgtc ccagcgcctg
     3961 ctcatgctca gctgacacgt cgttcacagt cggaatgagg atattcggaa tgatcagaat
     4021 atgcgttggc gcttgcggcg aaatatcgcg aaacgccgtt accagatcat cctggtagac
     4081 gatatcggag gggatctcac gacgaataat tttgctgaat atagtttctt ctgccacgac
     4141 attttccttt ttcaaatagc catgcgttgc gccatgctac gccgcgccac actgcgagta
     4201 tagagtatgg tcgagttaaa cctgctcttt caaccttaac tcacgatttc ttaagcaaaa
     4261 aatcgttttg ctgccgtata tatcgccatt attcccattt ctgcctgcga atgcgctgaa
     4321 aagacattct ctgtttggtt tacacgacaa atatgaatgc gtatatttct catttgcatt
     4381 tacaaacaaa attattcgca cactaaatat aaccgctcat caccctcctc cggcatgagc
     4441 ctgacgacaa cataaaccaa gagatttcaa atgctttcaa cacaatttaa cagggataat
     4501 caatatcaag ccagcaccaa accatcacta cttgccggtt gcatagcatt ggcactatta
     4561 ccttctgccg cttttgccgc tccagccact gaagaaacgg tgattgttga gggttcagcc
     4621 acagctccag atgatggcga aaatgattac agcgtaacgt ctacctctgc gggtaccaaa
     4681 atgcagatga ctcaacgtga tattcctcag tcggtcacta ttgttagcca gcagcggatg
     4741 gaagatcagc agttacaaac gctgggcgaa gtgatggaaa acacgctggg gatcagcaaa
     4801 agtcaggcgg attccgatcg tgctctttat tattcccgcg gattccagat cgataactat
     4861 atggttgatg gtatccccac ctattttgaa tcgcgctgga atctgggcga cgcactttct
     4921 gatatggcac tctttgaacg cgtagaagta gtgcgtggcg cgacaggact catgaccggg
     4981 acgggtaatc catctgcggc aattaatatg gttcgaaaac acgcgaccag tcgtgaattt
     5041 aaaggcgatg tctcggcgga atacggtagc tggaacaaag aacggtatgt ggcggattta
     5101 caaagcccac tcaccgaaga cggtaaaatc cgcgcgcgaa ttgtcggcgg ctaccagaat
     5161 aacgactcat ggctggaccg ctacaacagt gaaaagacct tcttctcggg cattgtcgat
     5221 gctgatttag gcgatcttac gacgctttca gccggttacg aatatcagcg cattgatgtt
     5281 aatagcccta cctggggcgg tttaccgcgc tggaatactg atggcagcag caacagttac
     5341 gatcgtgcac gcagtaccgc acctgactgg gcgtacaacg ataaagagat caacaaggtc
     5401 tttatgaccc tgaagcagcg gtttgctgat acctggcaag cgacactgaa tgccacccac
     5461 tctgaagtcg aatttgacag caaaatgatg tatgtcgatg cctatgtaaa caaagcggat
     5521 ggtatgctgg ttgggccata cagtaattat ggacctggct ttgattatgt cggcggcacc
     5581 ggttggaaca gtggcaaacg taaagttgat gcgctggatt tgttcgctga cggtagttat
     5641 gaattgtttg gtcgtcagca caatctaatg tttggtggca gttacagcaa acaaaacaat
     5701 cgttacttca gttcatgggc caacatcttc ccggatgaaa ttggcagttt ctacaacttt
     5761 aatggcaatt tcccacaaac cgactggtca ccacagagcc tggcgcagga cgataccaca
     5821 catatgaaat cgttatatgc tgccactcgt gtcacccttg ccgatccgct gcatctgatc
     5881 ctcggcgcac gttataccaa ctggcgggtt gatacgctga cttacagcat ggagaaaaac
     5941 cacaccacgc cttacgctgg tctggtgttt gacatcaatg acaactggtc gacctacgcc
     6001 agctatacct ctattttcca gccgcaaaat gatcgtgaca gttcaggcaa atatctggct
     6061 ccaatcaccg gtaacaacta cgagctgggt ctgaaatcgg actggatgaa tagccgtctg
     6121 accaccacat tagccatctt ccgtattgag caggataatg tcgctcagtc caccggtaca
     6181 cctatccccg gcagcaacgg cgaaaccgcc tataaagcgg tggatgggac agtcagtaaa
     6241 ggggtggaat ttgaactcaa cggcgcaatt accgacaact ggcagctgac atttggcgca
     6301 acgcgctata ttgcagagga taacgaagga aacgccgtta atcctaatct gccacgcacc
     6361 acggttaaaa tgttcaccag ctatcggttg cctgtcatgc cagagttgac agtcggcggt
     6421 ggtgttaact ggcaaaatcg cgtgtatacc gacaccgtga caccgtatgg caccttccgc
     6481 gccgagcaag gtagctacgc gctggtggat ctcttcaccc gctaccaggt gacgaaaaac
     6541 ttctcgttac aggggaacgt caataacctg ttcgacaaaa cctacgatac caacgtggaa
     6601 ggttctatcg tctacggcgc accgcgtaat ttcagcatta ccggcacgta tcaattctga
     6661 ataacacctg taaaaaaggc agccatctgg ctgccttagt ctccccaacg tcttacggat
     6721 tagtggttac ggatgtactc atccatctcg gttttcaggt tatcggattt agtaccgaaa
     6781 atcgcctgaa caccagaacc agcaaccact acgcccgctg cgcccagttt cttcaggccg
     6841 gcctgatcca ctttagacac atcagcaacg ctgacgcgca gacgggtaat acatgcgtcg
     6901 aggttagtaa tgttttcttt accaccaaat gcagcaacca gagccggtgc catttcgctg
     6961 gtacctgtcg cttttgcatc ttcagtcgcg tcttcacgac ccggcgtttt cagatccagt
     7021 gctttaatca gcacgcggaa gatggtgtag taaacaatcg cataaccgat accgacgatc
     7081 gggaacagcc acagtttgct gctgttacca gacagaacga tgaagtcgat cagaccgtgc
     7141 gagaacgacg taccgtcacg catccccaga agaatacaga ttgggaatgc caggcctgcc
     7201 agaatcgcgt ggatgatgta caggatcggc gcaacgaaca tgaaggagaa ctcgatcggc
     7261 tcggtgatac cggtcaggaa cgaggtcagc gccgcggaaa tcataatacc gcccactttc
     7321 gcgcggtttt ctggtttagc agagtgccag atagcaattg cggcagctgg cagaccgtac
     7381 attttgaaca ggaagccacc agacagttta cccgcagtcg ggtcacccgc catataacgc
     7441 ggaatgtcgc cgtggaaaac ctgacctgct gcgttggtgt attcaccaat ctgcatctgg
     7501 aaaggtacgt tccagatgtg gtgcagacca aacggtacca ggcaacgttc gatgaaaccg
     7561 taaatgccaa acgcaactac cgggttctgg taagcagccc actgagagaa ggtctggatt
     7621 gcagaaccaa tcggcggcca aatgaaggac agcacaacgc cagtaaagat ggcagccagg
     7681 ccagaaatga tcggcacaaa gcgtttaccg gcaaagaagc caagatactc aggcagctta
     7741 atacggtaga aacggttaaa catgtacgct gcgatcgcac cggagataat ccctccgagt
     7801 acgccagtat ccgccaggtg tttagaggcg atttcttcag caggtaaatg cagtaccagt
     7861 ggcgcaacca cggccatggt tttaaccatg atgccatagg caacaactgc ggccagcgcg
     7921 gatacgccat cgttattggt aaagccgagg gcgacaccga tcgcaaaaat cagtggcatg
     7981 tttgcaaaga cggaaccgcc tgcttctgcc ataacatgcg atacaacggc gggcagccag
     8041 ctgaaattcg cggaaccgac gcccagcaga atacctgcga taggcagtac ggataccggc
     8101 agcatcagcg atttaccgac cttttgcagg ttagcaaatg cattcttaaa cataattgag
     8161 agtgctcctg agtatgggtg ctttttttac gttctcacgc gtggcaaggg gggagagcct
     8221 cgccgtgtac agggcatcta agcgcccttt atttattaca cagagtaaaa taattcagtg
     8281 ccaatttgtt tgacggctat cacgtttcaa cttcagatca ttggagaagt tgcacatttt
     8341 gacaaaacat atgtcacaat atttcaaacg tggttattca ccgcccaatt ttcggcggtg
     8401 aactttactc gttttagcca ttaattacga gctttaaaaa aactcattca acggatggat
     8461 tgaaggcggg aagcgtcgat gtgaaacaga cgggcgaagt tatcggtggt tacctgcgcc
     8521 agttcttcaa cggcaacacc tttcaacaca gccatgtatt ctgcaacgtc acgaaccatc
     8581 gcaggttgat tctcttttcc tcgatgcggt accggcgcaa ggtaaggtga gtcagtttcc
     8641 accagtaatc gatccagggg gacataacgc gcagcatcgc gcagttgctc cgcattacgg
     8701 aaggtcacaa tgccggaaaa ggagatgtaa aatccgagat ccagtaattt acccgccgtt
     8761 tctctgtcct ctgtaaaaca gtgtagtacg ccaccgcaat ccgtcacttt ttcttcgcgc
     8821 agaattgcca gcgtatcggc acgggcgtca cgggtatgga cgataaccgg cttgttcagt
     8881 tcacgaccaa tctggatatg atggatgaag gactcttgct gacgtacttt agtttccggt
     8941 gtgtaataat aatccagccc ggtttcaccc agcgctacaa caccctcttc tgccgccaga
     9001 cggcgtaaat cttctacatc gtagggatca ttctggttga gtggatgcac gccacaagaa
     9061 aatacgacgt tgtcacgttc gcctaccaga tctcgcatat gtaaataacc cggtaatgtt
     9121 gtggcgactg ccagacaaaa tttcacatcg cgtgcggcgg ctttcgccag aacgtcatcc
     9181 acgtccttat gcaaagattc ataatccaga ccatcgagat ggcagtgtga gtcgactaaa
     9241 aacatgatgt ctctcttaaa gatgaggaac cggtagcaca acgcccggtt gcaggtaatg
     9301 ctcaatacgc agtaaaagat cggtgatgag aagctcgcgg ttgatgcctg taacagacat
     9361 taactgttca cgaatgtggc aaacatcccc cagtatagcc tgcaggcgcg agggagaaag
     9421 atggtttgcc agttcggcga ccaggcccgg cacatcaaca ttggtcacct gcgcagcacc
     9481 atgatggcgt tttagcgcat ccatcagcaa cgttgccagc cagtgtaaac gcgccggagc
     9541 ttgttcatga ttaagggccg ctagcagcga ataccagtcg cccgatggca cgctatatgc
     9601 caacgcctga cacaatgttt cacgagcctg ccagttatct ccctgaaaca acgccagtgc
     9661 cgcgccaggc gaaccggcgc ttaagcgcaa tgcggcaagt aatgcatcct gtgacattgt
     9721 cacttcgcgt gaaagccagg tcacggcgta ctgttccggc ggcggcgcaa ggtaatgtaa
     9781 ccgacaacga ctacgtaatg ttgccagtaa acgttcaggc tcgcgggtag ccaggaaaaa
     9841 ccaggtttct gctggtggct cttcaagcgt tttcagcaat gcgttagccg cggcgtcggt
     9901 cagtaaggca gcatcggtta cccagacaac tttcgcacca cctaggcgtg cgtgctcatt
     9961 cagcttttcg gtgacctcac gtaccgcatc aatgcccagc atatttttcc ctttttcggg
    10021 agccagggtg tagtaatcgg gatgcgtgcc agcctgcatc aactgacatc cacgacagtg
    10081 accgcaactt ttgtggccct gcggttgttg gcagagtaaa taacggctca gggcgtagat
    10141 taaagcatca tcgcccatgc ccggtaacgc ctgaatgagt agcgcatggt gacctcttcc
    10201 ggcctgatag ctggctacca gtttttcgaa atcaggtcgt aaccatggat accatctcat
    10261 gcgtccaact ccttaaccca gtgggtcacg gtagtgcgga ttgcatccat cacggcctcc
    10321 agcggctggg tggcatcaat ggtatgaata cttttatctt gtgcagccag ttccagatag
    10381 cgggcgcggg tgcgattaaa gaaatcgaaa gactcttgct caatacgatc cagctcgccg
    10441 cgcgcacgcg cgcgttttaa gccaacttcc ggggtaacat cgagatagag cgttaagtcg
    10501 gggcgaaaat ccccgagaac agcatcacgc agtgttgcca gcatatgttg gtcaatacca
    10561 cgtcctccgc cctgatacgc ctgagtggag agatcgtggc gatcgccaat cacccaggtg
    10621 ccgttagcca gagctggttt gatgaccgtt tctaccagtt gaacgcgcgc ggcataaaac
    10681 atcagaactt cggctttatc ggtaatgact tcatcgccta ccgatttgat atccagcacc
    10741 aggcttctta acttttcggc aagttgcgta ccgccaggtt cccgagtgaa aaccatgtcg
    10801 cggataccca gttgctcaag cgtctcaacc accacattac gcgcggtagt tttgcctgcg
    10861 ccttccagcc cctcaatgac gatatactta ctgcgcattt ttttccttaa gcactttcag
    10921 ataatcctgc acagacttgt tatggctggc aagattggta ttaaacgtgt gaccaccttt
    10981 accatcggcc acaaaataga gatacggcgt ttttgccgga tgcgcagcag ccttcagcga
    11041 atccgccccc ggcgtagcta tcgcacccgg cggcaaaccg gtaatggtat aggtgttata
    11101 cgctgtcggc gtttccaggt ctgcacgaga aagtttgcca ttataacgct ctcccatccc
    11161 gtaaatcacg gttgggtcgg tctgcaggcg cataccaatg cgtaaacggt tgataaatac
    11221 cgaggcaacc tgatcgcgtt cactggcaac ggcggtttct ttttcgataa ttgatgccat
    11281 cgtcaccagc tgatttttat ctttataagg cagaccgtcc gcacgccctt cccaggcgct
    11341 atcgaccgct ttcaccattt tcttgtgcgc tcgcttgagt aacgcgacat cggtggtatt
    11401 ggcggtatac atccaggtgt ctggccagaa ccaaccttca atccactccg ggttttccag
    11461 ttcaagtgcc tgcgctacgg tggcgtactt atcgtcactc agcgtgtgct tgatatacgg
    11521 agcctcacgc aattgcttga ggtagtcgct cagacgcatc ccttctacca gtcgcagcgg
    11581 gaactgtgct tctttaccgc tttccagcaa tttcagcatc tcgcgcacgg tcatctgcgg
    11641 tgtaaagcgg taagtcccgg ctttaaagtg agaaagatcc ggttcgatac gcagcaacca
    11701 ttgaaaaacc cgtgggcgat tgatgatctt atcggcataa agctgttcac caagcgccag
    11761 acgtccggtc cctggcttca gggtaaatat cgtctcttct ttgataagca atttgctgtc
    11821 ggcaagatgg cgaaccttcc agacgcccac accagcggcg atacccagta ccaccagcaa
    11881 taacaagata atcaataaca cttttttcat gactaattcg ggcgctcaca aagtggggct
    11941 aaatattcat ataacgttgc tgacgaaaag gagacatcgc cacaggcacg tacgggcatc
    12001 actggcatta acgcattaca aataaccatc tcatctgcct gcaacgcctc ttccagagag
    12061 gcttgcactt cgacaagctg ataagaggat tgtgccagca aacggataca gaattgtcgc
    12121 ataatgccgt taacacctgc ctgatccagt cgcggcgtat aaactacgtt gcccttccgc
    12181 cagaacaaat tagccgcaca gcattccgta acccaccctt cgctgtcaag gaccagcgcc
    12241 tcatcagcgt ttgtctgctc aagatgagag cgaatcaata cttgctcaag acgattgaga
    12301 tgtttaatac ctgcaagatg aggattgcgc cccagccgca ccgggcttag cgccaacgtc
    12361 atcccctcgt tacgcaaacg gtcgtaatgt gcaggataag ccgtaacgga gagaatccgc
    12421 gttgccggtc cactgttcaa tgtgctgtac cctcgcccgc cactaccgcg actgatcacg
    12481 actttcagta caccattttg ctgttctgct gccagcgttt tcatctcttg ttcaagctgt
    12541 ggccagaagt cacaggaaat catcaaccgc tgacaagcat cctgtagtcg ctggatatgc
    12601 gccgataaca aactgacttt accgtcgata actctggcgg tggtaaaaca accatcacca
    12661 aactgcgttg cccgatcgct tactgccagc gattcctgct tataaccgtt aattaagaac
    12721 ataccggctc cttatcagag aattgttagt gtggcagcat gttcactacg gaacaagtcg
    12781 gaataaaagc taagaaaaaa ggcccgcaag cggacctttt ataagggtgg aaaatgacaa
    12841 cttagatctt tttaaagatc aaagaaccat tagtgccacc gaagccgaag gagttacaca
    12901 gcgtgtattc cattccgctg acctgacgtg cttcatgcgg tacgaaatcc agatcgcaac
    12961 cttcatccgg gttatccagg ttgatggttg gcggaacagc ctgatcgcgc agcgccagga
    13021 tggagtagat agattctact gcacccgccg cacctaacag atgaccggtc atagatttcg
    13081 tggagcttac caacacacgg cttgcagctt caccgaagat ggttttcacc gcctgcgctt
    13141 cagctttatc gccagccggc gtagaagtac cgtgcgcgtt aacgtagcca atctgactcg
    13201 cttcaatgcc tgcatcacgc agagcatttg ccattgccag agctgcgcct gcgccatttt
    13261 ctggcggtga cgtcatatga taagcatcgc tgctcatacc aaagccgacg agttcagcgt
    13321 aaattttcgc accgcgtttt ttcgcgtgtt cgtactcttc tagtaccagc ataccggcac
    13381 catcgcccag tacgaagcca tcacgctctt tatcccacgg gcggctcgcc gcttgcgggt
    13441 tatcattgcg ggtagataat gcacgtgccg cgccaaaacc accaacgccc agcggcgtac
    13501 tggctttctc tgcgccacct gcaaccatca cgtcagcatc gccatacgcg ataatacgcg
    13561 cagcatgacc aatgttgtgc acgccggaag tacaggcggt cgcgatagag atgcttgggc
    13621 cacgcaggcc atacatgata gtcagatgac ctgccaccat gttcacaatc gttgacggaa
    13681 cgaagaatgg gctgatctta cgtggaccac cgttcatcag agatgtgtgg ttttcttcga
    13741 tcagtccgag gccgccaatc ccggagccaa ttgcggcacc aatgcgggtt gcgttctctt
    13801 ccgttatttc aaggccagaa tcctgcatgg cctgaacgcc agcgacaatt ccatattgaa
    13861 tgaaggcatc catcttgcgc tgttctttgc gcgagataat gtcctcacag ttaaaatcct
    13921 ttactaagcc agcaaatttc gttgcatagg cgctagtatc gaaatggtcg attaggctga
    13981 tgccactctg accggcaagc agagctttcc aggtagactc tacggtattg ccgacaggag
    14041 acaacatgcc cagtccggtc acaactacac gacgcttaga cacgtttgtc ctccagggag
    14101 ggaaaaaatg attctagtgg gacaaaaaga taaaactcag gcggtcgaac gaccgcctgg
    14161 agatgttcac ttacgcctgg tggccgttga tgtaatcaat ggcagcctga acggtggtga
    14221 ttttctcagc ttcttcgtcc ggaatctcag tatcaaactc ttcttccaga gccattacca
    14281 gctcaacggt gtcaagagaa tccgcgccca ggtcttcaac gaaagaagca ttgttggtaa
    14341 cttcttcctg cttaacgccc agctgttcgc cgataatttt cttaacgcgt tcttcgatag
    14401 tgctcatact cttaaatttc ctatcaaaac tcgctttcgc gatggttttc gtagtgtata
    14461 aaatgttgaa aaatttgcaa ctaaatcccg gcaggtctta ccacgatttt acgttatttt
    14521 gaggccttac cccccaataa cgcaaatcat tttgcactaa ttattactca taaccacgca
    14581 gactgcgcgc aacatgagca ttttgtgcaa atcgcggtca gaccatgtac atcccgccgt
    14641 tcacatgcaa agtttcaccc gtgatgtaag ctgcttcgtc ggatgccagg aatgcaaccg
    14701 cgttggcgat ttcctgtgcg ccgccgaggc gacccgcagg aacctgcgcc aggatacccg
    14761 cacgctggtc atcgctcagc gcacgtgtca tgtccgtttc aataaagccc ggagcaacaa
    14821 cgtttacagt aataccgcgt gacgcaactt cgcgcgccag tgatttactg aagccgatca
    14881 agcccgcttt cgccgcagcg tagttggcct gaccgccatt tcccatggta ccaaccacag
    14941 aaccgatagt gataatacga ccatgacgct ttttcatcat agcgcgcatt accgcttttg
    15001 acagacggaa aacagatgaa aggttggttt cgataatttc gttccactct tcatctttca
    15061 ttcgcattaa caggttatca cgagtgatac cggcattatt gaccaggata tccacttcac
    15121 caaattctgc gcgaattttt tccagaacag attcgataga tgccgggtcg gtcacattca
    15181 acatcagacc tttgccgttg gcacctaaat aatcgctgat cgcctgagcg ccattttcac
    15241 tggtcgcagt gccaataact ttcgcgccac gggctgcgag cgtttcagca attgcgcggc
    15301 caattccgcg gcttgcaccg gttaccagtg cgatttttcc ttcaaaattc atgattttcc
    15361 tcttttaaag ctcgagcgcc gctgccatcg ctgaaggttc gttcagcgcc gaggcggtca
    15421 gggtgtcgac aatgcgtttc gtcaggccag ttagcacttt gcccgggccg acttcataga
    15481 gatgttctac gccttgcgct gccatgtact caacagactt cgtccactga accgggttat
    15541 acaactgacg taccagtgcg tcacgaatgg catcaccatt ggtttcgcat ttcacatcaa
    15601 cgttattcac aacaggaact gttggtgcgt taaaggtgat tttcgctaat tctactgcca
    15661 gtttgtcggc tgctggtttc atcagcgcac agtgagacgg tacgctcact ggtaacggca
    15721 gcgcgcgttt tgcgcccgca gctttacagg cagcgccagc acgctcaacc gcctctttat
    15781 gaccggcaat aaccacctgt cccggagagt taaagtttac cggagaaacg acctgacctt
    15841 ctgcagcttc ttcacacgct ttcgcaatag acgcatcatc cagaccgatg attgccgcca
    15901 tagcgcccgt gccttctggt acggcttctt gcatgaactt gccgcgcatc tcaaccagac
    15961 gcaccgcatc agcgaaatca atcacgccag cgcaaaccag cgcggagtat tcccccaggc
    16021 tgtgaccggc catcattgcc ggtgctttac cgccctgctg ctgccatacg cgatacagcg
    16081 caacagatgc agtcaacagc gctggctggg tttgccaggt tttattcagt tcttcagctg
    16141 gcccctgctg ggtcagcgcc cacaggtcgt agcccagcgc cgcagaagct tcagcaaacg
    16201 tttcttcgac aattggatag ctcgccgcca tatcagccag cattccaacg gtttgagaac
    16261 cctgtccagg gaacacaaat gcaaattgcg tcatgtttta atccttatcc tagaaacgaa
    16321 ccagcgcgga gccccaggta aatccaccgc caaaggcttc aagcagaacc aactgccccg
    16381 gcttaatgcg cccgtcgcgt acagcttcat ccagcgcgca cgggacagag gccgcagagg
    16441 tattaccgtg gcgatccagc gtcaccacga cattgtccat cgacataccg agttttttcg
    16501 ccgttgcact gataatacgc aggttagcct gatgcggaac cagccagtcc agttgagaac
    16561 ggtcaagatt attcgccgtc agcgtctcat caacgatgtg cgccagttcc gttaccgcaa
    16621 ccttgaagac ttcgttgccc gccatcgtca gatgaattga attctctgga ttcacgcggt
    16681 cggcgtttgg cagcgtcagc aattcaccat aactaccgtc ggcatgcaga tgggtggaga
    16741 tgattcccgg ctcttcagag gcagccagca ccgcagcgcc cgcgccatcg ccaaaaataa
    16801 taatagtccc acgatcggtt ggatcgcagg tgcgcgccag tacatcggaa ccgacgacca
    16861 gagcatactt caccgcccca gatttcacgt attgatcggc tacgcttaat gcataggtga
    16921 aacctgcgca ggctgctgca acgtcaaatg ccgggcaacc tttaatgccc aacatgcttt
    16981 gaatctgaca agctgcgctc gggaaagcgt gcgtagcaga agtcgttgcc acaacgatca
    17041 ggccaatctg gtctttctca atgcccgcca tctcaattgc gcgtgtcgcc gcttcaaagc
    17101 ccatggttga aacggtttcg tttggcgcgg caatgtggcg ttcgcggata ccggtacgag
    17161 tgacaatcca ctcgtcagag gtgtccacca ttttttccaa atcggcgttt gtccgcactt
    17221 gttcgggcag atagctgcca gtaccaataa tcttcgtata catgtacgct cagtcacttt
    17281 tcggttatat accgtcactt gcaaactgcg agttcgctgg cagcgtcctg ctaccgcaga
    17341 gttccgcttt tgccaccgtc cagcagctca aaaccagctg ggtatacaga ttccaggcga
    17401 gcggcaattc gctgaggaac ttgtcgctgc accgcctgca ctgcctgttc aatcgcgacc
    17461 gcaaaagctc gctgattggc tgcaccatga ctttttatca ccgtgccgcg caatcctaac
    17521 agacaggcgc cgttatactg gtcggggttg aggtgactga atcgcctcgt caggctcttt
    17581 tgtagccaac gctttaataa cagtagccac cacgaccgtt ttttcccttc accctgagat
    17641 ttcagcagag aaaggaacat cctgacaaca ccttccatcg tctttaacgt gacatttcct
    17701 gtaaagccgt cacaaaccag cacatctgtc ttgccagtta acaactcatt ggcttcaaga
    17761 tagccgatat aattgataga agggattgtt ttaagcaccg ctgaggcatc ccgaatactg
    17821 tcgagaccct ttacttcttc ttcaccaata ttgagcaacg ccacgcgagg attgggaatt
    17881 tccaccacct cttcagccag aactgagccc ataatggcaa attgcaccaa cattgtgctg
    17941 tcacaatcga cgttggcccc taaatcgagg accaccgttt tgcccttttg ctgatgtggt
    18001 aataccgtca ccagcgccgg acgctcaatc ccctccaggg gcttgagtaa taattttgcc
    18061 agccccatca gtgccccggt attaccggca ctgacacagg cttgcgctcg accttctttc
    18121 accagctcca gggccacgcg cattgaactc ccacgactgg cgcggatagc ttgcgaaggc
    18181 cgggcatcac tggcgataac tgactgcgca ggaataatct gcagacgcga acgttgttca
    18241 aagtcagctt tagcaagtaa tggcgtgatg gcgtcgggat tgccgactaa aagaagagtg
    18301 agttgcgaat tagaattcag tgcctgcaat gctgcaggca ctgtcacgga agggccaaaa
    18361 tcccctccca tgacatctaa cgccagggtt agacgtgtca aggtatcgtc gccgcccggt
    18421 ttggtctttc cccagttgcc tggggaaaat cctcactaag cttcatcacg cagacgcgtg
    18481 attacttagc gatgaccttg cggccgcggt agtaaccgtc ggcagtgatg tggtgacgca
    18541 ggtgtttttc accagaagtt ttgtctacag acaggctggt gactgcggtc agcgcgtcat
    18601 gggaacgacg catgccacgt ttggaacggg ttggtttatt ctgttgtacg gccatggacc
    18661 ttactcctca attacggttt atccccgatc caacggggag caccaattac ttacgcttta
    18721 agctggctaa tacggcaaat gggtttggct tttgcgcttc ttcaggcagt tcaccaaaga
    18781 ccatgtccgc ttcggacact tcacagtgtt cagaatcatg caccggaact accggcaagg
    18841 cgaggatgat ttcatcttca accattgcaa gcagatcgat ttcaccgaat tcgttaacct
    18901 caatcggttc atacgcttcc ggcagtgctt cagcctgttc gtctgaacgc acaggactaa
    18961 aacaatacgt tgtgtagacc tgatgagtaa acggcttccc gcaacgctga cactcgagcg
    19021 ttaccgtcac cttcgcatcg ccgtttaaca ctgcgagacg ttggttatcg atagcgaacg
    19081 acatggagca ttccacatca ctgtccacac tgactacgga ttcggcgacg cgctcaacct
    19141 gatcaggggt atagataccc tggtaatcaa ggcgtttttg agccgtacga accggatcga
    19201 gagtcagggg taattttacc ttttgcatag ggcgcgcata ttaactttgt aacgtcatag
    19261 agtcaaagaa aaaggcagcc tgtggttgcc ttttgccaat aattcgcaca cattgcgggt
    19321 tactgcttta ttttcgttca gtgctgataa cgaacatcaa cctgcaaaac gaagcgcata
    19381 gtttaaaatg gctatcatca atacgctata tctgatggaa aaaaatatgc ctaaacttat
    19441 tttagcctcc acctcgccat ggcgtcgcgc tcttctggaa aaactgcaaa tctcttttga
    19501 atgtgcagca ccagaggtcg acgaaacccc acgcagcgac gaatcaccgc gacagttggt
    19561 gcttcgactg gcacaagaaa aagcgcaatc tctggcgtca cgttatccgg atcatttaat
    19621 tattggttca gaccaggtat gtgttcttga tggcgaaatc accggtaaac cgttaacgga
    19681 agaaaatgcc cgtctgcaat tacgcaaagc cagcggcaat atcgtcacct tctatactgg
    19741 actggcgttg tttaattcgg cgaatgggca tctgcaaaca gaagtggagc cttttgacgt
    19801 ccatttccgt cacctgagcg aggcggagat tgataattac gtgcgtaaag agcatcccct
    19861 gcactgcgcg ggtagcttta agagtgaagg atttggcatt acgctgtttg agcgtttaga
    19921 ggggcgtgat cctaacacgc tggttggttt accgctaatc gcgctgtgtc agatgttacg
    19981 tcgggaaggg aaaaacccgc tgatgggata gttttttgcg ccggatgcgg ttacttcgca
    20041 tccggcaatc ggtgctggcg gcctgatgcg gcgtaaacgc cttatcaggc caaccgccca
    20101 ttatcaggtt tatatgcttg tattagcgcg cgttacgcag cttttgcaaa caacgcttca
    20161 aaccttcatc catcggagct tcgatacgca tcacctcacc ggtccccgga tgagtaaact
    20221 tcaacgctgc agcgtgcagg aacaggcgat ttaatcccgt gcctgcttca gtgagctgcc
    20281 tgtcaaattc acggtcaccg tagcgatcgt caaaggcaat cggatgaccc gcatattgtg
    20341 tatgcacacg gatctggtga gtacgccctg ttaccgggct acaacgcacc agggtggcaa
    20401 atgcatagcg ttcttccact ttaaagcgtg tttccgacgg tttgccttcc tgactcacac
    20461 gcacgatacg ttcgccgctt tgcagaatat ttttcagtaa cggtgcttga acgctcttca
    20521 catgcgactg ccactgaccg cgcaccagcg ccaggtaatc tttttgcatc cctttttcac
    20581 gtaattgctc atgcagagaa cgcaacgccg agcgtttttt cgctaccagc aaaacacctg
    20641 aggtgtcccg gtcaagacga tgaaccagtt caaggaaccg cgcttccggg cgcaacgccc
    20701 gcaaaccttc aataacgccg aagcttaaac cactgccgcc atgtaccgcc gtaccggaag
    20761 gtttattcag caccaggatg tgatcatctt catataagat gacgtccgcc agcgccgcca
    20821 ccttttgcag atgtggcgaa accgcctctt cttcccgctc agcaacgcga accggtggaa
    20881 tacgcacctc atcacccgct tcgagtttat attcaggctt aatacgtttt ttgttcaccc
    20941 gcacttcgcc tttacgcaaa atacggtaaa tcatactttt tggtacgcct ttcaattggg
    21001 tacgcaaaaa gttatcgata cgttgccccg cttcgtcagc ggtgatagca acaattttta
    21061 cggatggagt ctctgttttc atggttggcg attctaatta gccaacagga ttcgcgccac
    21121 tcatttttct atgcttatat ttacttttgc accttattac ttcactgcgt gatcacttta
    21181 ttgatggtta ttaaaccaat caccagcaag aagtgaaaaa actgtgagta agcgggtgat
    21241 aaatggtaaa agtcatcttg ctataacaag gcttgcagtg gaataatgag gccgtttccg
    21301 tgtccatcct tgttaaaaca agaaatttta cggaataacc cattttgccc gaccgatcat
    21361 ccacgcagca atggcgtaag acgtattgat ctttcaggca gttagcgggc tgcgggttgc
    21421 agtccttacc ggtagatgga aatatttctg gagagtaata cccagtctgt ttctttgata
    21481 attgcgctgt ttttccgcat gaaaaacggg caaccgacac tctgcgcctc tttgagctga
    21541 cgataaccgt gaggttggcg acgcgactag acacgaggcc atcggttcac acccggaaag
    21601 gcgttacttt gcccgcagct tagtcgtcaa tgtaagaata atgagtaagt tacgatgaaa
    21661 agaatgttaa tcaacgcaac tcagcaggaa gagttgcgcg ttgcccttgt agatgggcag
    21721 cgtctgtatg acctggatat cgaaagtcca gggcacgagc agaaaaaggc aaacatctac
    21781 aaaggtaaaa tcacccgcat tgaaccgagt ctggaagctg cttttgttga ttacggcgct
    21841 gaacgtcacg gtttcctccc actaaaagaa attgcccgcg aatatttccc tgctaactac
    21901 agtgctcatg gtcgtcccaa cattaaagat gtgttgcgtg aaggtcagga agtcattgtt
    21961 cagatcgata aagaagagcg cggcaacaaa ggcgcggcat taaccacctt tatcagtctg
    22021 gcgggtagct atctggttct gatgccgaac aacccgcgcg cgggtggcat ttctcgccgt
    22081 atcgaaggcg acgaccgtac cgaattaaaa gaagcactgg caagccttga actgccggaa
    22141 ggcatggggc ttatcgtgcg caccgctggc gtcggcaaat ctgctgaggc gctgcaatgg
    22201 gatttaagct tccgtctgaa acactgggaa gccatcaaaa aagccgctga aagccgcccg
    22261 gctccgttcc tgattcatca ggagagcaac gtaatcgttc gcgcattccg cgattactta
    22321 cgtcaggaca tcggcgaaat ccttatcgat aacccgaaag tgctcgaact ggcacgtcag
    22381 catatcgctg cattaggtcg cccggatttc agcagcaaaa tcaaactgta caccggcgag
    22441 atcccgctgt tcagccacta ccagatcgag tcgcagatcg agtccgcctt ccagcgtgaa
    22501 gtccgtctgc catccggtgg ttccattgtt atcgacagca ccgaagcgtt aacagccatc
    22561 gacatcaact ccgcacgcgc gacccgcggc ggcgatatcg aagaaactgc gtttaacacc
    22621 aacctcgaag ccgccgatga gattgctcgt cagctgcgcc tgcgtgacct cggcggcctg
    22681 attgttatcg acttcattga catgacgcca gtacgccacc agcgtgcggt agaaaaccgt
    22741 ctgcgtgaag cggtgcgtca ggaccgtgcg cgtattcaaa tcagccatat ttctcgcttt
    22801 ggcctgctgg aaatgtcccg ccagcgcctg agcccatcac tgggtgaatc cagtcatcac
    22861 gtttgtccgc gttgttctgg tactggcacc gtgcgtgaca acgaatcgct gtcgctctct
    22921 attctgcgtt tgatcgaaga agaagcgctg aaagagaaca cccaggaagt tcacgccatt
    22981 gttcctgtgc caatcgcttc ttacctgctg aatgaaaaac gttctgcggt gaatgccatt
    23041 gaaacgcgtc aggacggtgt gcgctgtgta attgtgccaa acgatcagat ggaaaccccg
    23101 cactaccatg tgctgcgcgt gcgtaaaggg gaagaaactc caaccttaag ctacatgctg
    23161 ccgaagctgc atgaagaagc gatggcgctg ccgtctgaag aagagttcgc tgaacgtaag
    23221 cgtcctgaac aacctgcgct ggcaaccttt gccatgccgg atgtgccgcc agctccaacc
    23281 ccagctgaac ctgccgcgcc tgttgtagcc ccagcaccta aagctgcaac ggcaacacca
    23341 gcatctcctg cacaaccagg gttgttgagc cgcttcttcg gcgcactgaa agcgctgttc
    23401 agcggtggtg aagaaaccaa accggccgag caaccagcac cgaaagcaga agcgaaaccg
    23461 gaacgtcaac aggatcgtcg caagcctcgt cagaacaacc gccgtgaccg taatgagcgc
    23521 cgcgacaccc gtagtgaacg tactgaaggc agcgataatc gcgaagaaaa ccgtcgtaat
    23581 cgtcgccagg cacagcagca gactgccgag acgcgtgaga gccgtcagca ggctgaggta
    23641 acggaaaaag cgcgtaccgc cgacgagcag caagcgccgc gtcgtgaacg tagccgccgc
    23701 cgtaacgatg ataaacgtca ggcgcaacaa gaagcgaagg cgctgaatgt tgaagagcaa
    23761 tctgttcagg aaaccgaaca ggaagaacgc gtacgtccgg ttcagccgcg tcgtaaacag
    23821 cgtcagctca atcagaaagt gcgttacgag caaagcgtag ccgaagaagc ggtagtcgca
    23881 ccggtggttg aagaaactgt cgctgccgaa ccaattgttc aggaaacgcc agctccacgc
    23941 acagaactgg tgaaagtccc gctgccagtc gtagcgcaaa ctgcaccaga acagcaagaa
    24001 gagaacaatg ctgataaccg tgacaacggt ggcatgccgc gtcgttctcg ccgctcgcct
    24061 cgtcacctgc gcgtgagtgg tcagcgtcgt cgtcgctatc gtgacgagcg ttatccaacc
    24121 caatcgccaa tgccgttgac cgtagcgtgc gcgtctccgg aactggcctc tggcaaagtc
    24181 tggatccgct atccaattgt acgtccgcaa gatgtacagg ttgaagagca gcgcgaacag
    24241 gaagaagtac aagtgcagcc gatggtgact gaggtccctg tcgccgccgc tgtcgaaccg
    24301 gttgttagcg cgccagttgt tgaagaagtg gctgaagtcg tagaagcccc cgttcagatt
    24361 gccgaaccgc aaccggaagt ggttgaaacg acgcatcctg aagtgattgc cgccgcggta
    24421 actgaacagc cgcaggtgat taccgagtct gatgttgccg tagcccagga agttgcagaa
    24481 cacgcagaac cggtggttga accgcaggaa gagacggcag atattgaaga agttgccgaa
    24541 actgctgagg ttgtggttgc tgaacctgaa gttgttgctc aacctgccgc gccagtcgtc
    24601 gctgaagtcg cagcagaagt tgaaacggta gccgcggttg aaccagagat caccgttgag
    24661 cataaccacg ctaccgcgcc aatgacgcgc gctccggcac cggaatatgt tccggaggca
    24721 ccgcgtcaca gtgactggca gcgccctact tttgccttcg aaggtaaagg tgccgcaggt
    24781 ggtcatacgg caacgcatca tgcctctgcc gctcctgcgc gtccgcaacc tgttgagtaa
    24841 taattagctc aaagtaatca agccctggta actgccaggg cttttttatt tcatgtttga
    24901 atcaacatat taaaattcat caaatggcat ccttgctaac caacaatgca aaataggcaa
    24961 aaaaaatgcc cgccccggcg atcccagagc gggcagacaa aacataccca gtttcatgat
    25021 atgttttaaa gcgagcttat ttgttgagct ggaagagcga caatccctgc atatcggtaa
    25081 atgctttata cgatgcctgc aatgccgttt gctgcatgat gtaagatgaa atagttgcat
    25141 tccagtccac atcaaccaga tcgctcatct gctgcgtttg ccctaaagcg cgatcgctac
    25201 ctaaggaatc cagcgactcc agttcgttca gctgcgtgcc taattccgcg cgaacagtca
    25261 gcacattgtt cagcgagttt ttcagtccgc ggttggtttt atctaacgcc gcagcggcgg
    25321 tttctttatc cgcttcgcta tccgcgaccg gcgttttcag ggctgcgatg gcgctatcca
    25381 gcatggcaaa aagattggtt tcagaagcgc taccgtctgg ttccgctacc gcgttactgg
    25441 ttatactgtc gaaaattttg tcgcccgtat gtcctatcac catcgaacgc gaagcatcga
    25501 cctgttgctt aatactttct gttccgccga cataatcacc gttagcctca ctaaacggcg
    25561 cagtctctgt tttataaccg gcaaaaatgt agcgcccgtt accgtcagtg gtgttcgcca
    25621 gattcagcaa ctggtcacga agcccctgaa tatccgtagc cagcgaggcc cggtcatcgt
    25681 cactcaaggt gccattgctg gcgtagacaa ttttttcctg agcattctgg atagcagtgg
    25741 tgacctggct aagtacactc tcttccagtg acactttttg agtggcgaaa gtacgcgcca
    25801 gcgtgtactg gctgttttgc gcctgtgcct gggagagaac aaccgcttgt gatgctgcaa
    25861 tgggatcgtc agaagggtta acgactcgct tacctgtcga catctgctcg ccgtacttca
    25921 tccattccgc ctgagaattg gtgatgccac gcatgttttg ctggtacatc atctgggtac
    25981 tgaaacgcat cttatctccc cttagcgaat gttaatcagc gcatcaaaaa tcgcgtttgc
    26041 cgtctgcaga acctgcgcat tcgccaggta atactgctga aaacgttgca gatttccgta
    26101 ctcctcatcg agattgacac cggaaatcga ctgctgctga ttggaaagct gcgtcaccac
    26161 attaccttgc gtggtgctac tggttttcaa cgtcgcggtt ttattaccga tatcactcac
    26221 taacgaggca taagcgtcgt taaaggattt cgcaccgccc accgttttac tgttgctttg
    26281 cagatccagc agggcctgac cgttgcggtt gtcgctatca cctgcatctt cttcgctcgc
    26341 catcgcgatt ttcgcttcgt cggtgattaa tacatccatg ttgacgatgg cgtcacttac
    26401 tggtttcagc gtgaagctgt cgttaacggc aggcgttcct gtaaacgtca actccagacc
    26461 atcaaatgcc actttaccgt tggcatccgg cgtcaccgta aaagtggtat tgctggcaag
    26521 gcgggtgacc tgccactgat tattatcgaa cgagattttg taatctgtcg ccagtaccgc
    26581 ggaggcatca gttaccgtgg caccgatcgc aacgtcacct ttgtttttcg tgttttgcag
    26641 aaccgcgggc ttaccgatag caaagaaatc ttcaccggca tcgccgttag catcaaatcc
    26701 ggctttgtgt tggctgttga aagcctcggc aaatgccagc gccagttgtc caagcgtatt
    26761 acgcgtctgg tccagatcct gagaacggaa tgtcagaatg ccgcccagcg acccggtatt
    26821 cagtaatttc tccgggatct caatattgcc tgccgtccca tcaacgtaag cgacagtcgt
    26881 acgagaaggg tcggcgctgg aaggaactgc cgccagttgc cgcgccgtac ttccctgaac
    26941 cagtgagtaa ccattggcca tcgtgatgtt ataagtaccg ccatcctgaa cgctgacttc
    27001 tacgccaaca atctggttta attcgctcac cagttgatcg cgttgatcca gcagattgtt
    27061 aggtgacgcc cctgccccca cgcctgtcag gcgcgagatt tgatcgttca ggctggcaat
    27121 ttgtttagcg taattgttga tctgatcaac gctggcacct atcgcgatat tgacctgttt
    27181 gtcctggtcg cgcagatatt gatcggtggt tttaaactga ttcaccaacc cttctgattt
    27241 cccaatcagc gcctggcgcg ctgccgggtc ttccgcgtta ctcaccagcg tttgcaggct
    27301 ggtgaagaaa tcctgcatct gtgttgccag cgaagaggta ctggtggaga gcatattgtc
    27361 gattttcgac atctgctcat agcgggcagt caggccgcta ctttgcgtct gcgcagcacg
    27421 taactggttg gtaataaacg catcatactc acgctgcaca ccagaaacgt agacgccatt
    27481 gccaacccag ccgccagcgc ccaacgtgct attggcctgc gccataatag tggtttggcg
    27541 ggtatatccg gcaacgttat agctggagat attattactt gccgtattta acgccgcctg
    27601 ggccgcgttc agtccgctca tggcgttatt aatcaagctg gacatggagg ttccttataa
    27661 gccttcaatt acagagtatt atcggcagcg acccgccgga cttgagttat tcagaacaga
    27721 ttatcaatgt tcatactgta ggttttgctc accttgtcgc ttatcgattt catctgctga
    27781 atcatgttgg tgagtttgcg ggcatagtga ggatcggtgg catagcccgc gtcctgtagg
    27841 gcctgcgccc cctgttccgc actcgcggcg gtcgtcacgg cggcgtagcg cgggttacgc
    27901 gttaacagcc caacgtaatc cgacaaggct tccagatacg agctgtagac gcgaaacttc
    27961 gcttttactt tcttcgcttc gccgttttca tattcagtcg tggtgatttc agtaactggc
    28021 cctttccagt tgccagaggc tttgacacca aacaggttat agctcggctc gccgttttcg
    28081 cggcggattt gccgttgccc ccaaccagat tccagtgccg cctgagcgag gatcaaatga
    28141 tgtggcacac cgctttgctg gcttgccagt tgggcgggca gcgagagttg cgcgaggaat
    28201 gctttactgt cacccggcag cgaatcatcg tagttacgtg gcacggcctt ttgcaccagc
    28261 tgcgaaagcg cctgattttg ataacgcacc acagtttcga gcgggaattt catcggtgct
    28321 gctggcgtgg actcctctgg caatggttgt tctggcgtca tctgtttaac catcatctct
    28381 gcaagcccca gacctttgcc cgccgtcatc tgttgggcaa tttgctggtc atacatactg
    28441 gtatacagac gagtgtgctc gctgctgaac aggccatctt ttggtaaagc gtcgcgcatg
    28501 cttttcaaca tcatctgcac gaacatccct tccacctgac gggccaccgg acggatattt
    28561 gccgccggat cttcgcccgc tttcgccttt agttcgttga gtgattgcgc atcccaggcc
    28621 gcacttgcca gtagtttgct gtcgctgatc atcagatgat ttccagtttt gcccgcagac
    28681 atcccgcact ttgcattgat tgcagtatgg acatcagatc catcggcgta gcgcccagcg
    28741 cattgagcgc gcgcaccacg ttattgaggc tggcgctgga acgtacgctt tgcagcgaac
    28801 cgccgctctg gcgtaaatcg atctgcgttt gtggagtaac cacagtctgt ccaccaccaa
    28861 acggtgtatc tggctggctg acattggcct gacgattgac tgttactgag agatttccct
    28921 gcgctaccgc gcagctgtcg agggtcactt cgcgattcat caccaccgaa ccggtgcgcg
    28981 agttaatcac tactttagcg tcctgcgggg tgacattaac ctgcatattc tggatatctg
    29041 caaggaaacg gacctgggaa ctgttgccac ttggtacgcg cacctgaata gtccgcgcat
    29101 ctaacgcggt ggcgctgcca tatccacgca cgcggttgat ggtgtcagcg atttgctgcg
    29161 ccatgctgaa atcttcgtcg ttaagttgca aattaagggt attcccgacg ccaaactggc
    29221 tgggcaattc acgttcaata accgcaccat tggtgatccg tccaccgttc agttggttca
    29281 cctgaacact gctaccgcca gcggaggctc ctgcgccgcc aaccagaata ttgccctgcg
    29341 ccagcgcata cacctgactg tcaacgccct taagcggcgt catcaacaac gtacctccac
    29401 gcaagctttt ggcatttccc atggaagaaa ccaccacatc gatggtttgc ccctgacgtc
    29461 caaacggagg aagtgacgct gtcaccatta ccgcagcgac gttttttagc tgcatattgg
    29521 tgcccgtcgg aacggtaatt cccagctgtg agagcatgtt attaagcgtt tgtgtggtaa
    29581 acggcgtctg ggttgtctgg tcaccggtgc catccagccc caccaccaga ccatagccaa
    29641 tcagtgagtt ttgccttacc ccctgaacac tggtgagatc gcgaatacgc tcagcctgag
    29701 ccgccgtcgt gaccagtaga agaattaatg cagagagaaa tttaatcacc acagcctcac
    29761 ttacattggc gacaggttaa ggaagaaacg ctgcaaccag cccatatttt gcgcttcgtt
    29821 aatgtagcca ttgcctacgt attcaatgcg cgcatccgcc acctgagtag acggtacggt
    29881 attgctgccg ctgatagtgc gtggattaac cacgccagag aagcgaataa attcggtacc
    29941 ctgattaatg gcaatctgtt tttcacccac cacatgcagg ttgccgttga ccagtacctg
    30001 gtcaaccgtc accgtcaacg tgccgctaaa ggtattgctg gcattggccc cgccctttcc
    30061 gttgaacgtg ttaccaccgg aggcttcgac atcggcacga gcgttaccaa acagcccctg
    30121 caaatagcgc ggcacagtat caaagccaaa attagtttta ccgtcacggc tggcattcgc
    30181 agaggagctt ttgctggcgc tgacgttctc ctgcaacacg atggtcagcg tatcgccaat
    30241 attgcgtggt cgacgatctt caaacagcgg ttgatagcca tagttaatcg gctgagcaga
    30301 ctggaaaata gaaccgttgg cgacgggcgt cggaccggga accggttgtg cactggtcgc
    30361 cccctgcacc agcggcgtgg agggtatcca ggcgcagccg gttagtgaaa gcaccaacaa
    30421 gctggaaatg gcataagtat gcgcagcgtt tttttgcatg gctatcatct tcaaaaatca
    30481 gtaaaccggt gaacctgcca ccggttaagc cttagagttg cgtcagtttt tgcagcatct
    30541 gatcggtggt ggacaccgct ttactgttga tttcgtaagc gcgttgcacc tgaatcatat
    30601 tgaccagttc ttccgccacg ttgacgttag acgtttcaac atacccttga tacagcagtc
    30661 ccgcgccgtt caggcccggc gtgctttcgt tcggtgcacc agaggattgc gtttcggtgt
    30721 agaggttttc gccaatgctc tccagcccgg tgtcattcat aaaggtggtg agattgagct
    30781 gcccaacctg aaccggagct gcctggcctt gttgggttac gctgaccacg ccatcacgac
    30841 cgatggtgat acttaacgca ttcgccggaa tggtgatcgc tggctgcacc tgaaaaccac
    30901 cagccgtcac cagctgcccg ttctgatcca cctggaaaga gccgtcacgg gtataggctg
    30961 atgaaccatc tggcaacatc acctggaaaa agccctgccc tttaatcgcg acatctttgc
    31021 tgttgttggt ctgcgacagg tttccctggc tgtgtaagcg ttcagtggcg accgggcgta
    31081 cccccgtgcc gatttgtaat ccggagggta aggtggtttg ttcggaagac tgtgcccccg
    31141 gctggcgaat ggtttgataa agcagatctt caaacaccgc gcgctgacgc ttaaaaccgt
    31201 tagtactgac gtttgccagg ttgttggcaa tgacgtccat attggtttgc tgggcgtcaa
    31261 ggcccgtttt ggcgatccat aatgaactga tcataaaatg tcctgtagtg gattagtgac
    31321 aagcagagca gaagcacgcg acagtgtgaa tttcccctca ccctaaccct ctccccaaag
    31381 gggcgaggga atagtccgcg cgcttttatt gcaatgtcat caatcgttca attaactcat
    31441 cgacagcagt tggttggcac ggcctgcgtt atcatcgacg ctgctgatca ccttcatctg
    31501 catttcaaaa cgccgcgcgc tggcaatcat gtcgctcatt gccgcaacgg cattgacgtt
    31561 actgccttcc agaacccccg acatcacacg caaggttgga tctgcctgca gtatcggccc
    31621 acgcgtggcc tggctttctg cgcttaaacg aaaaatgccg tcgtcaccgc gttgcacttc
    31681 gctgcccgtg gctttcacca gtttcagacg ccccactggc gcaaccgtat ttgccagatc
    31741 gcccggattg agcgccgaga ttgtgccatc ggcagcaata gtgatttccg ccccttccgg
    31801 cacagcaatt ggcccagcct cgcctatcac cggatgcccc tgaattgtca gttgcccggt
    31861 gggatcaacc tgaatgctgc cattacgcgt atacccttcg ctgccgtcag cggactgcac
    31921 ggccagccag ccatcctgct gcaatgcaac gtccagcggg cgcgaggtgt aatccatctt
    31981 gccgggcgtc atgtctgcac ccggtgttga cgccgttacc agcgtgcgcg tgggcagtga
    32041 aagcccttcc accggcactg cacgcaaggc gtttaactgc gcgcgaaaac cgggcgtaga
    32101 ggcattggcc agattactgg cggttaccgc ctgttgattc agcgtctggc tggctgctcc
    32161 catcgcggta taaattgcgt gatccattga gctatcccgt cagcgattag cgtaagttaa
    32221 ccagcgtgtt gaggatctgg tcctgggttt tgatggtctg ggcgttagac tgatagttac
    32281 gctgggcaac gatcatattg accagttctt tactgagatc gacgttggac gcttccaacg
    32341 caccgttggt cagggtgcca aagttgcccg tcccggctgt ccccaacagc gccacgccag
    32401 aagattgcgt cgcagaccag acgttgtcgc cttcggatgc cagaccttcg ttgttggcaa
    32461 agttcgccag tacaatctgc cccagcagtt gtgtttgttc gttggaatag ttgccgacaa
    32521 ccgtaccgtc atcattgatt tgataactca ccagatcgcc cggtttgtag ccattctggg
    32581 tggttgccac aatattgtta gcgccggtat tttgctgcat ggagttgagg aagctcaggc
    32641 taaacgtggc gggatctgcg ccgttaattg cgccagtggt aatattctct gttggatttg
    32701 aggtcagaac gccattggca ttaaacacca gcttcattgc aggctcggct gtacctgttg
    32761 gatcactgct atcctgggtg tagacctgcc agttattatc cccggtcttc acaaagtaga
    32821 cgctcatgtc atgagcatta ccctgactgt cgaaaacagt caccgaacct tttttgttat
    32881 agctatccgc attgctggcg ctgaatggcg taacagtagg aagcggatca ctggaattca
    32941 ggttgatctg catcgatgcc gtggtggtag ttttcgctgc catcagggta ttcgggatcg
    33001 aaatattggt cggattcgcc ccttgctgaa tagtcggcgg cgtaccggtt gccgggtaac
    33061 ccgtcagctg taaaccttgc atattcacca ggttacggtt ttcatccagc ttaaattgtc
    33121 cgttacggct gtagaacacc gaaccgttgc tgtctaccag acggaaaaaa ccgttctggc
    33181 tgatagcaac gtccagacct cgcccggtgt tggtggtcgt gccatcggta aagtcctgag
    33241 tgataccggc aacttttacc cccagtccca ctttcgaacc ggcaaacata tcggcaaaag
    33301 aggccgtgcc tgatttaaag ccgtaggtgg cggagttggc gatattgttg ccaataacat
    33361 cgaggttggt ggcggcagcg tttaatccgc taaccgcttg agaaaaggcc atgactgact
    33421 cctgaaatgt gaaggcttaa attatctgcc gtacttcgtc gagggtggtg gtgccgtaag
    33481 tgccgagatc cagcgtatta ccgctgttgc cgcggatcac accctgcacc agagcaaact
    33541 gcagcggctg ggcaaccagt tgtgtaccac cgttactggc gctaatcgct acattgtaag
    33601 aaccgttcgg cgcagtgctg ccatcagtca acgtaccgtc ccaggtgaaa ctgtgaactc
    33661 cagcggtcag ttcaccaata tcaatggtgc gcacaaccgc gccattttta tcggtgatgg
    33721 tggccgtaac tttgtctgcc gcctgttgca gctcaacacc aaacggcgtg gtcgtggtca
    33781 cagccccttc ttcactgccg gttcccgcaa gaacagttgt gccggggatc atcacgccgt
    33841 gaccgatcag gttactggcc tgtaacgact ggctgttatc aatctgtccg gaaatagatc
    33901 cgagcgtggt attgagtttt tcaatcccgc tgaccgtgct gatttgtgcc aattgcgacg
    33961 tcagctcgtt gttttccatt ggattggtcg ggtcctggtt tttcagctgc gccaccagca
    34021 aagtcagaaa actgctttgt aaatctgcgg cgttgctgcc cgtgagcgaa ctactgctgg
    34081 tggtactgac gccggtattt gtcggatcgg tggtggttac cgcaatggac atagctttct
    34141 cctttattga ccgagcgtaa gggttttcag catcatactt ttcaccgtgt tgagcacttc
    34201 aacgttggcc tgatagctgc gtgacgccga catggtgtta accatctccc cgacgacatc
    34261 aacgttcggc atttttacgt agccctttgc atctgccagc ggattacccg gttcataaac
    34321 cagtttgtcc ggggcctgac tttctataac atcggcaacc tttacgccgc ctgtcgcagc
    34381 acctggtgca gcgttaacct ggaataccac ctgttttgcc cgatatggct gtccatcagg
    34441 accggtcacg ctatcagcat ttgccagatt actggccgcc acgttcaggc gctgggactg
    34501 ggcagttaac gccgacccgg cgatatcaaa aatattcagc agtgccatcc gttaatttcc
    34561 gctctgtaaa acgttcatca tgcctttgat ttgcccgctc aacgcgctaa ggctcatctg
    34621 gtattgcagg ctgttatcgg caaactgggt gcgttcgcga tccatatcga cggtattacc
    34681 gtcaagcgaa ggctggtccg gaatacggta ttgcagttct gcggtaggag gcgtcagcgc
    34741 ctgcgccggg atgtgttgcg ttgaggtcat cgtcagtgca accacactgg ttgcatcccg
    34801 tccacgttgc atgacttttt taagttcact ggcaaaatcg atatcgcgcg cctgataacc
    34861 aggggtatcg gcattggcga tgtttgctgc cagcacttcc tgacgctggg cgcgcagatt
    34921 gagcgcctct tgttgaaaac gtaaggcggc gtcgagctta tcgagcatat ctcctccgca
    34981 ggtatcaaaa ttctgccatc agcttaaatg cctttacgcg cgcgttatcg gcggaataaa
    35041 cgcaaaatgg gtcgctattt atgccgttga tggtcattgc ggacaggtac aattcacgtt
    35101 gtagaaatgg ctgggggcga aaatgctgac aataaaacgt agcgtggcga tcatcgcgat
    35161 actgttcagt ccgttaagta cggcgagcaa tctcacatcg caattgcaca acttttttag
    35221 cgcccaactc gcgggggtaa gtgatgaggt tcgtgtttct attcgtacag cgcccaatct
    35281 actaccgcca tgcgagcagc cattgctttc gatgagcaat aattcccgcc tgtggggcaa
    35341 tgtgaatgtg ttggcacgct gcggtaacga caaacgatat ttacaggtta atgtgcaggc
    35401 cacaggaaat tatgtggttg ccgcgatgcc cattgtgcgg ggaggaaagc tggaagctgg
    35461 caatgtcaaa ctaaaacgcg gacggctgga taccctgcca ccgcgtacgg tgctggatat
    35521 caatcaactt gttgatgcca ttagcctgcg cgatctatca cccgatcaac ctatccagtt
    35581 aacccagttt cgccaggcat ggcgggtaaa agcgggacaa cgcgtcaatg tgatcgccag
    35641 cggtgatggg tttagcgcca acgcagaagg tcaggcgctg aacaatgcag ccgtcgcaca
    35701 gaatgcgcgg gtgcgcatgg tatcgggaca ggtagtcagc ggcgttgttg atgcagatgg
    35761 gaatattctt ataaacctgt aagctgttaa agattacccg tcccttgccg ataaataagc
    35821 aacacatgat aaaagcgccc tcaatgagga ataaaccatg agtattgatc gcacttcgcc
    35881 tctgaagcct gtaagcaccg ttcaaccgcg cgaaaccact gacgcgccgg taacgaacag
    35941 ccgggcggca aaaacaaccg cctccaccag caccagtgtg acgttaagcg acgcgcaagc
    36001 aaaactgatg caacccggca gcagtgatat caatcttgaa cgtgtcgaag cgttaaaact
    36061 ggcgattcgt aacggtgaac taaaaatgga caccggcaaa attgccgatg cgctgatcaa
    36121 cgaagcgcag caagacttgc agagtaactg atcgtatgac acgtcttgca gagatcctcg
    36181 accagatgtc cgctgtgctt aacgatctca aaacggtaat ggatcaagag cagcaacatc
    36241 tctctatggg gcagatcaac ggcagccagt tgcaatggat tacagaacaa aaaagctcac
    36301 tgctggcgac gctggattac ctcgaacagt tacgcaagaa agaacccaat acagcaaata
    36361 gcgttgatat tagtcaacgc tggcaggaaa ttactgtgaa aacgcagcaa ctacgccaaa
    36421 tgaatcaaca taacggctgg ttactggaag gacagattga gcgcaatcaa caggcgctgg
    36481 aaatgttgaa accgcatcag gaaccgacgc tatatggggc gaacggtcag acctcaacaa
    36541 cccatcgcgg cggtaaaaag atttcgatct gaatattatc tccggcctgc actgcaggcc
    36601 ggaatgcatt gttacaccgt ccggcgggca aattctttaa ctttgaagcc cagtaccgcc
    36661 agtgcagcga agtacgcggc aatccccgcc agcacgaccg ccattaaacg cagtaagcgc
    36721 cagggcatgg tacccaatga ccactccggc atgatatgta acatacctaa aagcacgcca
    36781 gacatcacca gtaccgccac caccagacgc aacagaaacg ccatccagcc gggttgcgga
    36841 gtaaagattt tctgcttacg caactgccag taaagcagcg aagcattcag acacgccgcc
    36901 agaccaatag aaagtgacag cccggcatgt ttcaacggac caataaacgc caggttcatc
    36961 aattgcgtta aaatcagcgt aacgatggca attttcactg gcgttttaat gtcctggcgg
    37021 gaataaaagc caggagccaa cactttcact acaatcaggc caatcaaacc caccgagtag
    37081 gcaattaacg cccgctgggt catcagcgca tcaaacgcgg taaatttacc gtactggaac
    37141 agcgaaacgg ttaacggacc tgaaagaatg cccaacgcaa ccgcactcgg cagcgccaac
    37201 aggaaacaaa gacgcaaccc ccagtccatc aaacggttgt attcatcatg attgccactg
    37261 gcaaaacttt tcgacagcga cggcagcaaa atggtgccaa gcgccacgcc cagcacaccg
    37321 gacggaaact ccattaagcg gtcggcgtaa tacatccaag acaccgaacc ggaagcaaga
    37381 aacgaggcaa aaatggtgtt gatgattaag gagatctggc tcacagagac gccaaggatc
    37441 gccggtccca tctgtttcac cacgcgcatt gctccggcat cgtggaagtt aatgcgcggc
    37501 aggaccagca tgccgatctt cttcaggtgc ggtagctgat acaccagctg caggatgccg
    37561 ccgaccgtaa cagcccacgc cagcgccagc accggtgggt taaagtacgg tgcggcaaac
    37621 agcgcgaaac caatcatgct gatgttaagc agtgttggag caaacgccgg aatcgagaag
    37681 cggttccacg tattcagaat cgctcccacc agcgacgcca gggagatcag caagatatag
    37741 ggaaaggtaa tctttagtag ctggctggtc agggcaaatt tgtcagctgt gtcagcgaag
    37801 cctggcgcgg tcaccatgat cacccacggt gcggcgagca tgccagcgac cgtcacaacc
    37861 gccagcgcga gtgtcagcag gccagaaaca taagagacaa agacccgcgt ggcgtcttca
    37921 ccctgcttac ttttatattc cgccagaatc ggtacaaatg cctgggaaaa tgccccttcg
    37981 gcaaagatac ggcgtaacaa gttaggaagt ttaaaagcga cgaaaaaggc gtcggttgcc
    38041 atccctgcgc caaagattct ggcgacaatt gcgtctcgtg cgaagccaag cacacgcgaa
    38101 aacatggtca tcgagctgac ggcggccagc gattttaata aattcatcgg tgttctaatc
    38161 cagacccacg ggcaaaacgc ctgcaaggca ggcgctgaaa gaggcgaata gtctacctgg
    38221 attatggtga attgctaccg ccagatgtta cagggtttat tcactcatcg catcgcgcca
    38281 gatcttgtca acgatacgtt gcgccagcac ggcctgttcg ccggcggttt gcggaactgt
    38341 ctgattttgc acacattcaa tgaagtgccg cgcacagccg acaaatccac gttgttcaag
    38401 agtgctctgc caaccaggaa tcggtttatg cactacgccc tgcccgcgct cctcacgcca
    38461 ttcgcgcata tccgtaatgt cgatgagcgc accgtcagtc acggcctgca cggtttcacg
    38521 ctgacttccg gcacggcgat gcatacaggt ggtgatctgc aaaggaccgg ccgaaaaatg
    38581 gtgctcggca aacagcattt cgccagcgtc gttagtcagt agcgtaccgc catccagaga
    38641 ggctttgccg cccgacaacc acagcgcggt atccaccaca tgcagataat catccagcaa
    38701 cgtgaaataa agatcgtgtg gcccgacact attgctacga tgtttatcca ttcttagcga
    38761 agctgcggta gcgagttgcg tttttaactc accgtagagt ggtgcgaaac gacggttaaa
    38821 accgaccatc aacgtcagtt ttttacgcgc cgccagttcc accagccgtt cagcatcgcg
    38881 cagattttct gccagcggtt tatcgacaca gacatgtaca cccgcattga gtaacgtact
    38941 gaccacgtca aagtggctgg cggtgctgga atgcacaaaa accgcatcgc aactggcggc
    39001 aaggctggat aacgaatcgg cataaggaat gcgccagctt tcacaaattg gcagggcttt
    39061 cgcgcgcgta ggcgaccagg ctccttgtaa catccagtca gacgctgccg ccagcaccgg
    39121 taaccacgct ttttgcgcaa tgccgcctaa tcccacaacg ccgatacgta attttttcac
    39181 tttaatctcc cagatgggcc agcaacgaat caagacgctg tttcagttct gccacttcga
    39241 tttccagggc ttcgacgcgg gcctgtaaat caccatcaac cgcgttcgac atatccgtta
    39301 ccgccggctg atcctctacc tcaccactga aaagatgcat gtagcggctt tcgcgtttac
    39361 ccggttcgcg ggccagacgc accacaaaag gaccatcttc gcgatttgcc agttgttcca
    39421 gcgtcgactc cacttccgcc atatcgctga attcatacat tcgcgcggcg cggctgcgca
    39481 gttcacctgg cgtctgggca ccacgcaata acaacgtggt gattaacgcc acttccgctg
    39541 cgctcagttt cagatcgcca aattctgaat tacaaaaacg ttgctcatat ttggtgaccc
    39601 gattaccaaa accgctcact gtgcgtagat aatgacgttt gaccagatta tccagctgtt
    39661 cctgcacttc ggattcactc agattcatga ccggttcacg gttcgttttc tgattacagg
    39721 ccgtgactac accattgact gagagcgggt attgctccgg cgtggtcacc tgcttttcca
    39781 gcaagcaacc aatcacgcga gcttcaaggg cagtaagttg atatttcatg agattctcct
    39841 tagcggccgg gcgtccagtc tggggtagtt aatgccgtca gtacgtgatc gcgccattgt
    39901 ccatcaatca acagatagtc tttcgcatag ccttcttttt caaaacccag tcgcgccagt
    39961 aaatcaccgc tgcgtttatt gtgcggcata taattagcca taatgcgatg aatatgttgg
    40021 gtgcgctgca tataacgaat ggctgcggtc agggcttcaa acatgagtcc tttgccctgc
    40081 catttttgcc caatcgaata accgagatag caggcatgaa aagagccacg aacaacattg
    40141 gaaaaattgg caacgccaat aatctctttt tcgtccgggt cgaataagcc aaagtagaaa
    40201 gctgaacctt gtttatgaaa ttcgttaatc atccccagcc tggcctgcca gcctgatgga
    40261 taacagtggc tttcatcgcg cactggctcc cagggcttga ggaaatggcg attctctgcg
    40321 taataatccg caagacgcca ggcatcacga tcatgcacca gacgcacgac cagtcggtct
    40381 gtggttaagc gcacttttgg cacgttactg cgatagccaa acattctata cctactcctt
    40441 cccgtaacgt ctttaatacg ctgtaagtat tactatacct gcgcaaccag accctgtgaa
    40501 aagtccaaaa tgccattttc tgcattattc acatatttga taaaaactct ctatcaaagc
    40561 gacgttttga taaaaaaata ttgtccccta agtgatggga aaagtcttag cggcaatgca
    40621 gaatagaaag tgctcatctt ttatttcccg ggaggggaaa tgtcccgcgt atcgcaggcg
    40681 aggaacctgg gtaaatattt cctgctcatc gataatatgc tggtcgtgct ggggttcttt
    40741 gttgtcttcc cgctgatctc tatccgcttc gttgatcaaa tgggctgggc cgccgtcatg
    40801 gtcggtattg ccctcggtct acgtcaattt attcagcaag gtctgggtat tttcggcggc
    40861 gcaattgccg accgctttgg tgccaaaccg atgattgtta ccggtatgct gatgcgcgcc
    40921 gccggattcg ccacaatggg tatcgcccac gaaccgtggc tattgtggtt ttcatgcctg
    40981 ctctcgggac tcggcggcac gttgtttgat ccgccgcgtt cggcgctggt ggtgaaacta
    41041 atccgtccac aacaacgtgg tcgttttttc tcgctgttga tgatgcagga cagtgccggt
    41101 gcagtcattg gcgcattgtt ggggagctgg ctgttgcaat acgactttcg cctggtctgc
    41161 gccacagggg ccgttttgtt tgtgctgtgt gcggcgttca atgcgtggtt gttaccggca
    41221 tggaaactct ccaccgtacg cacgcccgtt cgcgaaggca tgacccgcgt gatgcgtgac
    41281 aagcgttttg tcacctatgt cctgacgctg gcgggttact acatgctggc tgtacaagtg
    41341 atgctgatgc tgccaattat ggtcaacgac gtggctggcg cgccctctgc cgttaaatgg
    41401 atgtatgcca ttgaagcgtg tctgtcgtta acgttgctct accctatcgc ccgctggagt
    41461 gaaaagcatt ttcgtctgga acaccggttg atggctgggc tgttgataat gtcattaagc
    41521 atgatgccgg tgggcatggt cagcggcctg caacaacttt tcaccctgat ttgtctgttt
    41581 tatatcgggt cgatcattgc cgagcctgcg cgtgaaacct taagtgcttc gctggcggac
    41641 gcaagagctc gcggcagcta tatggggttt agccgtctgg gtctggcgat tggcggcgct
    41701 attggttata tcggtggtgg ctggctgttt gacctgggca aatcggcgca ccagccagag
    41761 cttccgtgga tgatgctggg aattattggc atcttcactt tccttgcgct gggttggcag
    41821 tttagtcaga aacgtgccgc gcgtcgtttg ctggaacgcg acgcctgatt tgatactccc
    41881 ccctgactcc tccatactga aagtgaactg acagccaaat ggaggagtca cgtgaagcta
    41941 tacatttacg atcactgccc ttactgcctc aaagcccgca tgattttcgg cctgaaaaat
    42001 atccccgtcg aattacatgt tctgctcaac gacgacgcag aaacacccac ccggatggtc
    42061 ggtcaaaaac aggttcccat tctgcaaaaa gatgacagcc gctatatgcc agaaagcatg
    42121 gatatcgttc actatgtcga taaactcgac ggcaaaccgt tactgaccgg caaacgttcc
    42181 cctgccattg aagagtggct gcgcaaggtc aatggctacg ccaacaaact gctgttgccg
    42241 cgttttgcca aatcggcatt tgatgagttt tctactcccg ccgcgcgcaa atatttcgtc
    42301 gacaagaaag aggccagcgc gggtaatttt gccgacctgc tggcccactc tgacggtctg
    42361 attaagaata tcagcgatga tttgcgtgcg ctggacaaac tgatcgtcaa accgaacgcc
    42421 gtgaatggcg aactttcgga agatgatatt cagctatttc cgctactgcg taatctgacg
    42481 ctggtagccg gaatcaactg gccaagccgc gttgctgatt accgcgataa tatggcgaaa
    42541 cagacacaaa tcaatttgtt atcatcaatg gcgatttaat cctgacccgc cgcggcagcc
    42601 tgtattcgcg ggttgccgcc gttttcagtt ttttctgctg gcgagtttat cgctggtgac
    42661 acatgctgcg ttgtgtcagg atattgacgc agatttcatg tcgaggacta ccatgaacaa
    42721 gtttttattt gccgctgcat tgatcgtcag tggcctgctc gttggctgta atcaactcac
    42781 ccaatacacc atcaccgaac aagaaattaa ccagtcgctt gcgaaacata ataatttctc
    42841 aaaagatatt ggtttacccg gcgtggctga cgcccatatt gttctgacaa acttgaccag
    42901 ccaaattggt cgcgaagagc cgaataaggt taccctaacc ggagacgcca atctggacat
    42961 gaactccctg ttcggtagtc agaaagcgac catgaaactg aagctgaaag cgctgcccgt
    43021 gtttgataaa gaaaaaggtg cgatcttcct gaaagagatg gaagtggtcg atgcgacggt
    43081 acaaccggaa aaaatgcaaa cggtgatgca aacgttgctt ccctatttga accaggcatt
    43141 acgcaattac tttaaccagc aacctgctta cgtcctgcgc gaagatggca gtcagggcga
    43201 agcaatggcg aaaaaactgg cgaaaggcat tgaagtgaag ccaggcgaaa ttgtcattcc
    43261 gtttacggat taatgacgag ggcgcattcg cgccctttat ttttcgtgca aaggaaaacg
    43321 tttccgctta tcctttgtgt ccggcaaaaa catcccttca gccggagcat agagattaat
    43381 gactgcacca tcccaggtat taaagatccg ccgcccagac gactggcacc ttcacctccg
    43441 cgatggcgac atgttaaaaa ctgtcgtgcc gtataccagc gaaatttatg gacgggctat
    43501 cgtaatgccc aatctggctc cgcccgtgac cacagttgag gctgccgtgg cgtatcgcca
    43561 acgtattctt gatgccgtac ctgccgggca caatttcacc ccattgatga cctgttattt
    43621 aacagattcg ctggatccta atgagctgga gcgcggattt aacgaaggcg tgttcaccgc
    43681 tgcaaaactt tatccggcaa acgcaaccac taactccagc cacggcgtga cgtcaattga
    43741 cgcaatcatg ccggtacttg agcgcatgga aaaaatcggt atgccgctac tggtgcatgg
    43801 tgaagtgaca catgcagata tcgacatttt tgatcgtgaa gcgcgcttta tagaaagcgt
    43861 gatggaacct ctgcgccagc gcctgactgc gctgaaagtc gtttttgagc acatcaccac
    43921 caaagatgct gccgactatg tccgtgacgg aaatgaacgg ctggctgcca ccatcactcc
    43981 gcagcatctg atgtttaacc gcaaccatat gctggttggt ggcgtgcgtc cgcacctgta
    44041 ttgtttaccc atcctcaaac gcaatattca ccaacaggca ttgcgtgaac tggtcgccag
    44101 cggttttaat cgagtattcc tcggtacgga ttctgcgcca catgcacgtc atcgcaaaga
    44161 gagcagttgc ggctgcgcgg gctgcttcaa cgccccaacc gcgctgggca gttacgctac
    44221 cgtctttgaa gagatgaatg ctctgcagca ctttgaagca ttctgttctg taaacggccc
    44281 gcagttctat ggcttgccgg tcaacgacac attcatcgaa ctggtacgtg aagagcaaca
    44341 ggttgctgaa agcatcgcac tgactgatga caccctggtg ccattcctcg ccggggaaac
    44401 ggtacgctgg tccgttaaac aataaaaatc gtagcttcct gttgtcatta ggttatttta
    44461 cctgtataaa taaccagtat attcaacagg gggctattat gcgaattgaa gtcaccatag
    44521 cgaaaacttc tccattgcca gctggggcta ttgacgccct ggctggcgaa ctttcccgcc
    44581 gtattcagta tgcgtttcct gataatgaag gccacgtatc ggtacgttat gccgcagcga
    44641 ataatttatc ggttattggc gcaacaaaag aagataaaca gcgcattagc gaaattctcc
    44701 aggaaacgtg ggaaagcgcc gatgactggt ttgtcagcga ataatatgca gtgatttttg
    44761 tttttgccgg gtcgccccgg cttttttatt ttacttacaa attttgagta caaaatttct
    44821 acacttcctc aaaataattg cacaatatgc taaaaaaata tgaatgacat gctgttttat
    44881 tgttcatata aatcttaaaa gcagaaattt atctgttccc ccctttaaaa attcggtgaa
    44941 tacccttact tattggtata ctgaagttgc ttcagataaa aacgcattga acctcgaata
    45001 acgttgtcta gtaacacgaa ttagggggcc atgatggaaa aaaataatga agtcattcag
    45061 actcatccgc tcgtagggtg ggacatcagc accgttgata gctatgatgc gctgatgttg
    45121 cgtttgcact accagacccc aaataagtcc gagcaggaag ggactgaagt tggtcagacg
    45181 ctctggttaa ccactgatgt tgccagacaa tttatttcga tattagaagc aggaatcgcc
    45241 aaaattgaat ccggtgattt cccggtaaac gagtatcggc gtcattaaca tgacatgacc
    45301 atccacccaa aaggcacctc accggtgcct ttaccatttc tgggttgtat atctgcattc
    45361 agttaattac tctgcttaaa ccatgagagc agagagaaaa aaatgaaata cgatctcatc
    45421 attattggca gcggttccgt aggcgctgcc gccgggtatt atgcaacccg cgccggttta
    45481 aacgtgctaa tgaccgacgc ccatatgcca ccgcatcaac acggcagcca ccacggcgat
    45541 acgcgattaa ttcgccatgc ttatggtgaa ggcgaaaagt atgtcccgtt ggtcctccgc
    45601 gcgcaaacgc tgtgggatga actttcccgc cacaacgaag atgatcccat ttttgtacgc
    45661 tctggtgtca ttaacctcgg cccggctgac tccgcatttc tcgccaacgt cgcccacagc
    45721 gccgaacagt ggcaactcaa cgttgaaaag ctcgatgcgc aagggattat ggcccgctgg
    45781 ccagaaatac gcgtcccgga caactacatc ggcttatttg agactgattc cggttttttg
    45841 cgcagcgaac tggcgattaa aacctggatc caactggcga aggaagcggg ctgtgcgcaa
    45901 ctgttcaact gcccggtcac cgcaattcgt catgacgatg atggcgtaac tattgaaacc
    45961 gttgacggtg agtatcaggc gaaaaaagcg attgtctgcg cgggaacatg ggtaaaagac
    46021 ctgctcccgg agctgcctgt ccagcccgta cgcaaagtat ttgcctggta tcaggccgat
    46081 gggcgctata gcgtgaagaa taaattcccg gcgtttaccg gtgaacttcc caatggcgat
    46141 caatattatg gttttccggc agaaaacgac gcgttgaaga ttggcaaaca taacggaggc
    46201 caggttatcc attcagcgga tgaacgtgtt ccgtttgcgg aagtggtcag cgatggttcg
    46261 gaagccttcc cgttcttgcg caatgtattg ccgggtatcg gttgctgcct gtacggcgct
    46321 gcctgcacct atgataattc gcctgacgaa gattttatta tcgataccct acccggccac
    46381 gataatacac tgctcattac cggcctgagt gggcacggtt ttaaatttgc gtcagtttta
    46441 ggggaaatag ctgccgattt tgcgcaagac aaaaaaagcg attttgattt gacgccattc
    46501 aggctttccc gcttccaata atcatcatta cggcctccag aatgaggccg tttttacagg
    46561 agtatttaat gcgtcggctg ttgcactatc tcatcaataa tattcgcgag catctgatgc
    46621 tttatctttt tctctgggga ttgttggcaa ttatggatct gatctatgtg ttttattttt
    46681 agttttccgc actgacataa actgacaaat atttaatctc cctttcattt agcgtgaaaa
    46741 attgaatgag ataattcctg cttctacagc actcaccaga catctctgat
//
LOCUS       DAPGWB010000016        45210 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.016, whole genome shotgun sequence.
ACCESSION   DAPGWB010000016 DAPGWB010000000
VERSION     DAPGWB010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 45210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45210
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.016"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            142..477
                     /gene="eutS"
                     /locus_tag="RHX79_000924"
     CDS             142..477
                     /gene="eutS"
                     /locus_tag="RHX79_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutS"
                     /protein_id="HDV2196129.1"
                     /translation="MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIM
                     TLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLN
                     YTLCEMTKS"
     gene            490..969
                     /gene="eutP"
                     /locus_tag="RHX79_000925"
     CDS             490..969
                     /gene="eutP"
                     /locus_tag="RHX79_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutP"
                     /protein_id="HDV2196130.1"
                     /translation="MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDT
                     PGEYFSHPRWYHALITTLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTD
                     MPDADVAATRKLLLETGFEEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE"
     gene            944..1645
                     /gene="eutQ"
                     /locus_tag="RHX79_000926"
     CDS             944..1645
                     /gene="eutQ"
                     /locus_tag="RHX79_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutQ"
                     /protein_id="HDV2196131.1"
                     /translation="MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFT
                     ITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQ
                     SLEQGAMQPSFKSVTGKGGIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAG
                     FMQWENAFFPWTLNYDEIDMVLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGTTSS
                     VKFLYVAWPANWQSL"
     gene            1642..2445
                     /gene="eutT"
                     /locus_tag="RHX79_000927"
     CDS             1642..2445
                     /gene="eutT"
                     /locus_tag="RHX79_000927"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization cob(I)yrinic acid
                     a,c-diamide adenosyltransferase EutT"
                     /protein_id="HDV2196132.1"
                     /translation="MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLR
                     IKFIDEQGRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKM
                     VAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGC
                     QAIVGLSDEDLHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVF
                     ITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGETQ"
     gene            2442..3458
                     /gene="pta"
                     /locus_tag="RHX79_000928"
     CDS             2442..3458
                     /gene="pta"
                     /locus_tag="RHX79_000928"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDV2196133.1"
                     /translation="MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPIL
                     VANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTD
                     PLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGP
                     ALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANV
                     QQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIG
                     YKIAQRLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAAVPRQTKVNRESSLQ
                     TLVE"
     gene            3497..3790
                     /gene="eutM"
                     /locus_tag="RHX79_000929"
     CDS             3497..3790
                     /gene="eutM"
                     /locus_tag="RHX79_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutM"
                     /protein_id="HDV2196134.1"
                     /translation="MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAM
                     VRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL"
     gene            3897..4184
                     /gene="eutN"
                     /locus_tag="RHX79_000930"
     CDS             3897..4184
                     /gene="eutN"
                     /locus_tag="RHX79_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutN"
                     /protein_id="HDV2196135.1"
                     /translation="MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAI
                     DNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK"
     gene            4196..5599
                     /locus_tag="RHX79_000931"
     CDS             4196..5599
                     /locus_tag="RHX79_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase EutE"
                     /protein_id="HDV2196136.1"
                     /translation="MNQQDIEQVVKAVLLKMQSSDTPPAAVHEMGVFASLDDAVAAAK
                     VAQQGLKSVAMRQLAIAAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTP
                     GVECLSPQVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAP
                     HPAAKKVSQRAITLLNQAIVAAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGE
                     AVVEAARKHTNKRLIAAGAGNPPVVVDETADLARAAQSIVKGASFDNNIICADEKVLI
                     VVDSVADELMRLMEGQHAVKLTAEQAQQLQPVLLKNIDERGKGTVSRDWVGRDAAKIA
                     AAIGLNVPQETRLLFVETTAEHPFAVTELMMPVLPVVRVANVADAIALAVKLEGGCHH
                     TAAMHSRNIENMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSAR
                     TFVRLRRCVLVDAFRIV"
     gene            5610..6446
                     /gene="eutJ"
                     /locus_tag="RHX79_000932"
     CDS             5610..6446
                     /gene="eutJ"
                     /locus_tag="RHX79_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutJ"
                     /protein_id="HDV2196137.1"
                     /translation="MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSM
                     VVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPP
                     GTDPRISINVLESAGLEVSHVLDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKKGKVT
                     YSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGDEIWPAVKPVYEKMADIVARHIE
                     GQGITDLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLY
                     AK"
     gene            6436..7623
                     /gene="eutG"
                     /locus_tag="RHX79_000933"
     CDS             6436..7623
                     /gene="eutG"
                     /locus_tag="RHX79_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311342.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization ethanol dehydrogenase
                     EutG"
                     /protein_id="HDV2196138.1"
                     /translation="MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQA
                     QTRGLKHLFVMADSFLHQAGMTAGLTRSLAVKGIAMTLWLCPVGEPCITDVCAAVAQL
                     RESGCDGVIAFGGGSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGT
                     GSETTNVTVIIDAVSGRKQVLAHASLMPDVAILDAALTEGVPSHVTAMTGIDALTHAI
                     EAYSALNATPFTDSLAIGAIAMIGKSLPKAVGYGHDLAARESMLLASCMAGMAFSSAG
                     LGLCHAMAHQPGAALHIPHGLANAMLLPTVMEFNRMVCRERFSQIGRALRTKKSDDHD
                     AINAVSELIAEVGIGKRLGDVGATSAHYGAWAQAAQEDICLRSNPRTASLEQIVGLYA
                     AAQ"
     gene            7740..8966
                     /gene="eutH"
                     /locus_tag="RHX79_000934"
     CDS             7740..8966
                     /gene="eutH"
                     /locus_tag="RHX79_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutH"
                     /protein_id="HDV2196139.1"
                     /translation="MGINEIIMYIMMFFMLIAAVDRILSQFGGSARFLGKFGKSIEGS
                     GGQFEEGFMAMGALGLAMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACD
                     MGGFFLAKELAGGDVAAWLYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLA
                     GIVTIPIGCIAGGLVAMYSGVQINGQPVEFTFALILMNMIPVIIVAILVALGLKFIPE
                     KMINGFQIFAKFLVALITLGLAAAVVKFLLGWELIPSLDPIFMAPGDKPGEVMRAIEV
                     IGSISCVLLGAYPMVLLLTRWFEKPLMSVGKVLNMNNIAAAGMVATLANNIPMFGMMK
                     QMDTRGKVINCAFAVSAAFALGDHLGFAAANMNAMIFPMIVGKLIGGVTAIGVAMMLV
                     PKEDATATKTEAEAQS"
     gene            8963..10366
                     /gene="eutA"
                     /locus_tag="RHX79_000935"
     CDS             8963..10366
                     /gene="eutA"
                     /locus_tag="RHX79_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HDV2196140.1"
                     /translation="MNTRQLLSVGIDIGTTTTQVIFSHLELVNRAAVSQVPRYEFIKR
                     EISWQSPVFFTPVDKQGGLKEAELKSLILEQYQAAGIAPESVDSGAIIITGESAKTRN
                     ARPAVMALSQSLGDFVVASAGPHLESVIAGHGAGAQTLSEQRLCRVLNIDIGGGTANY
                     ALFDAGKISGTACLNVGGRLLETDSQGRVVYAHKPGQMIVDECFGAGTDARSLTGAQL
                     VQVTRRMAALIVEVIDGTLSPLAQALMQTGLLPAGVTPEIITLSGGVGECYRHQPADP
                     FCFADIGPLLATALHDHPRLREMNVQFPAQTVRATVIGAGAHTLSLSGSTIWLEGVQL
                     PLRNLPVAIPIDETDLVSAWQQALLQLDLDPKTDAYVLALPASLPVRYAAVLTVINAL
                     VDFVARFPNPHPLLVVAGQDFGKALGMLLRPQLQQLPLAVIDEVIVRAGDYIDIGTPL
                     FGGSVVPVTVKSLAFPS"
     gene            10378..11739
                     /gene="eutB"
                     /locus_tag="RHX79_000936"
     CDS             10378..11739
                     /gene="eutB"
                     /locus_tag="RHX79_000936"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit alpha"
                     /protein_id="HDV2196141.1"
                     /translation="MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQER
                     VAAKQVLSEMTVADIRNNPVIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVLS
                     DETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSAR
                     LQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNI
                     PTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFN
                     RIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPEY
                     LYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIM
                     GMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPS
                     LFF"
     gene            11760..12647
                     /gene="eutC"
                     /locus_tag="RHX79_000937"
     CDS             11760..12647
                     /gene="eutC"
                     /locus_tag="RHX79_000937"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit beta"
                     /protein_id="HDV2196142.1"
                     /translation="MDQKQIEEIVRSVMASMGQTAPAPSEAKCATTNCAAPVTSESCA
                     LDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRS
                     KDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPD
                     VQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILG
                     AKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVI
                     VDLAKRMLEQKASGINMTR"
     gene            12657..13316
                     /gene="eutL"
                     /locus_tag="RHX79_000938"
     CDS             12657..13316
                     /gene="eutL"
                     /locus_tag="RHX79_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutL"
                     /protein_id="HDV2196143.1"
                     /translation="MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADS
                     DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDA
                     MVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY
                     GIDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQR
                     A"
     gene            13329..13829
                     /gene="eutK"
                     /locus_tag="RHX79_000939"
     CDS             13329..13829
                     /gene="eutK"
                     /locus_tag="RHX79_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutK"
                     /protein_id="HDV2196144.1"
                     /translation="MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTL
                     VVEGDLAACRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPD
                     APVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSR
                     YRLKPH"
     gene            13875..14927
                     /gene="eutR"
                     /locus_tag="RHX79_000940"
     CDS             13875..14927
                     /gene="eutR"
                     /locus_tag="RHX79_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator EutR"
                     /protein_id="HDV2196145.1"
                     /translation="MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHA
                     LTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA
                     TRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD
                     RVLHMLRSQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG
                     AMLEDAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA
                     FHAILGIGPNAWLKRIRLNAVRRELISPWSQSTTVKDAAMQWGFWHLGQFATDYQQLF
                     AEKPSLTLHQRMREWG"
     gene            complement(14933..15832)
                     /gene="hemF"
                     /locus_tag="RHX79_000941"
     CDS             complement(14933..15832)
                     /gene="hemF"
                     /locus_tag="RHX79_000941"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HDV2196146.1"
                     /translation="MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGG
                     RSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYV
                     PTSHANVRFFIAEKPGAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVY
                     PRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVE
                     RRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY
                     DYQPKDGSPEAALSEFIKVRDWV"
     gene            complement(15836..16705)
                     /gene="amiA"
                     /locus_tag="RHX79_000942"
     CDS             complement(15836..16705)
                     /gene="amiA"
                     /locus_tag="RHX79_000942"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiA"
                     /protein_id="HDV2196147.1"
                     /translation="MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDEPLKTSNG
                     HSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDA
                     RLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA
                     KYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKL
                     HSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYF
                     HWFDNQKAHSKKR"
     gene            16919..17344
                     /locus_tag="RHX79_000943"
     CDS             16919..17344
                     /locus_tag="RHX79_000943"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311332.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family acetyltransferase"
                     /protein_id="HDV2196148.1"
                     /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSL
                     FLVAEVNGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK
                     IQINVPEDNDMVLGMYERLGYEHADVLSLGKRLIEDEEY"
     gene            17331..17780
                     /locus_tag="RHX79_000944"
     CDS             17331..17780
                     /locus_tag="RHX79_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2919 domain-containing protein"
                     /protein_id="HDV2196149.1"
                     /translation="MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASR
                     EQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTWHVLYFLLLLAQVVL
                     LCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFNEEKE"
     gene            17841..18416
                     /locus_tag="RHX79_000945"
     CDS             17841..18416
                     /locus_tag="RHX79_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpoE-regulated lipoprotein"
                     /protein_id="HDV2196150.1"
                     /translation="MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQ
                     GVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQG
                     TISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
                     QFSGEWSGPEGLMPSDDTLKNWKVSKIIWRR"
     gene            18512..19411
                     /gene="yfeX"
                     /locus_tag="RHX79_000946"
     CDS             18512..19411
                     /gene="yfeX"
                     /locus_tag="RHX79_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311329.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphyrinogen peroxidase"
                     /protein_id="HDV2196151.1"
                     /translation="MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATF
                     EAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLR
                     HDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI
                     KDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMMIGRTKVANEEIDGDERPETSHLTR
                     VDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAM
                     LRFTKPVTGGYYFAPSLDKLMAL"
     gene            complement(19469..20773)
                     /gene="pbp4b"
                     /locus_tag="RHX79_000947"
     CDS             complement(19469..20773)
                     /gene="pbp4b"
                     /locus_tag="RHX79_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin binding protein PBP4B"
                     /protein_id="HDV2196152.1"
                     /translation="MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMD
                     RWISQQVDAGYPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLAS
                     NTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGG
                     FPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESV
                     TGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTS
                     TLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMF
                     TTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVML
                     SNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK"
     gene            complement(20778..22202)
                     /gene="murP"
                     /locus_tag="RHX79_000948"
     CDS             complement(20778..22202)
                     /gene="murP"
                     /locus_tag="RHX79_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylmuramic acid transporter subunit
                     IIBC"
                     /protein_id="HDV2196153.1"
                     /translation="MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVD
                     PNIKTLEGVKGVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQL
                     KAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALN
                     FMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDF
                     FGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIM
                     PLGGWLFEGMSWLFMHLNSNPFGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNS
                     LFPILSMAGAGQVGAALALYWRAQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMK
                     PFITACLGGAAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAG
                     GILVAWVCGFIFTTLFGCRNVNLD"
     gene            complement(22206..23102)
                     /gene="murQ"
                     /locus_tag="RHX79_000949"
     CDS             complement(22206..23102)
                     /gene="murQ"
                     /locus_tag="RHX79_000949"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HDV2196154.1"
                     /translation="MQLEKMITEGSNTASAEIDRVSTLEMCRIINDEDKTVPLAVERV
                     LPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGG
                     EYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCR
                     TVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGK
                     VFGNLMVDVVATNEKLHVRQVNIVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLD
                     AAEAKKRLDQHGGFIRQVLDKE"
     gene            23266..24123
                     /gene="murR"
                     /locus_tag="RHX79_000950"
     CDS             23266..24123
                     /gene="murR"
                     /locus_tag="RHX79_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MurR"
                     /protein_id="HDV2196155.1"
                     /translation="MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRKMAKQL
                     GISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIA
                     RKLNREKELALEQTCALFDYARLQKIIDVISKAQFIQITGLGGSALVGRDLSFKLMKI
                     GYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL
                     ADSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR
                     SSELTQRLK"
     gene            24252..25043
                     /gene="ucpA"
                     /locus_tag="RHX79_000951"
     CDS             24252..25043
                     /gene="ucpA"
                     /locus_tag="RHX79_000951"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase UcpA"
                     /protein_id="HDV2196156.1"
                     /translation="MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEK
                     LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMS
                     DDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA
                     AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPM
                     RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI"
     gene            25214..26230
                     /gene="cysP"
                     /locus_tag="RHX79_000952"
     CDS             25214..26230
                     /gene="cysP"
                     /locus_tag="RHX79_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate/sulfate ABC transporter
                     substrate-binding protein CysP"
                     /protein_id="HDV2196157.1"
                     /translation="MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALN
                     PPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKL
                     IPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY
                     TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE
                     SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQA
                     QTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLA
                     AGRN"
     gene            26230..27063
                     /gene="cysT"
                     /locus_tag="RHX79_000953"
     CDS             26230..27063
                     /gene="cysT"
                     /locus_tag="RHX79_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000458418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysT"
                     /protein_id="HDV2196158.1"
                     /translation="MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSW
                     AQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL
                     PFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ
                     PVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFI
                     AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLILLFSINTLQSRFGRRVVG
                     H"
     gene            27063..27938
                     /gene="cysW"
                     /locus_tag="RHX79_000954"
     CDS             27063..27938
                     /gene="cysW"
                     /locus_tag="RHX79_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysW"
                     /protein_id="HDV2196159.1"
                     /translation="MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQ
                     AFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLL
                     LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPF
                     VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF
                     GAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRL
                     ENQEKRAQQEEHHEH"
     gene            27928..29025
                     /gene="cysA"
                     /locus_tag="RHX79_000955"
     CDS             27928..29025
                     /gene="cysA"
                     /locus_tag="RHX79_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter ATP-binding
                     protein CysA"
                     /protein_id="HDV2196160.1"
                     /translation="MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTL
                     LRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVL
                     PRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
                     DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQA
                     DAPNQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLR
                     PWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGE
                     RLFVGLQHARLYNGDERIETRDEELALAQSA"
     gene            29159..30070
                     /gene="cysM"
                     /locus_tag="RHX79_000956"
     CDS             29159..30070
                     /gene="cysM"
                     /locus_tag="RHX79_000956"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HDV2196161.1"
                     /translation="MSTLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRA
                     ALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA
                     MRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ
                     QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPAEYLP
                     GIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPGAVVV
                     AIICDRGDRYLSTGVFGEEHFSQGAGI"
     gene            complement(30073..30441)
                     /locus_tag="RHX79_000957"
     CDS             complement(30073..30441)
                     /locus_tag="RHX79_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfeK family protein"
                     /protein_id="HDV2196162.1"
                     /translation="MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLAQKKDLIF
                     VRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDE
                     NAQPFLHALIAQTDKTVPAQ"
     gene            30546..31397
                     /gene="pdxK"
                     /locus_tag="RHX79_000958"
                     /gene_synonym="thiJ"
     CDS             30546..31397
                     /gene="pdxK"
                     /locus_tag="RHX79_000958"
                     /gene_synonym="thiJ"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine/pyridoxal/pyridoxamine kinase"
                     /protein_id="HDV2196163.1"
                     /translation="MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGL
                     NVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQ
                     IKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI
                     FELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNV
                     ISHSRVKTDLKGTGDLFCAQLISGLLKGKALNDAVHRAGLRVLEVMRYTQQHESDELI
                     LPPLAEA"
     gene            complement(31439..31948)
                     /gene="crr"
                     /locus_tag="RHX79_000959"
     CDS             complement(31439..31948)
                     /gene="crr"
                     /locus_tag="RHX79_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDV2196164.1"
                     /translation="MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAE
                     KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE
                     GFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVG
                     ETPVIRIKK"
     gene            complement(31989..33716)
                     /gene="ptsI"
                     /locus_tag="RHX79_000960"
     CDS             complement(31989..33716)
                     /gene="ptsI"
                     /locus_tag="RHX79_000960"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HDV2196165.1"
                     /translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFL
                     SGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA
                     AAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVA
                     ADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYL
                     ILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIG
                     TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM
                     DIGGDKELPYMNFPKEENPFLGWRAIRIAMDRKEILRDQLRAILRASAFGKLRIMFPM
                     IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS
                     IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     ERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN
                     KFIEEKTIC"
     gene            complement(33761..34018)
                     /gene="ptsH"
                     /locus_tag="RHX79_000961"
     CDS             complement(33761..34018)
                     /gene="ptsH"
                     /locus_tag="RHX79_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HDV2196166.1"
                     /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA
                     KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE"
     gene            complement(34402..35373)
                     /gene="cysK"
                     /locus_tag="RHX79_000962"
     CDS             complement(34402..35373)
                     /gene="cysK"
                     /locus_tag="RHX79_000962"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDV2196167.1"
                     /translation="MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR
                     IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK
                     LLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPE
                     IWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGE
                     EIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGA
                     AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ"
     gene            complement(35558..36319)
                     /gene="cysZ"
                     /locus_tag="RHX79_000963"
     CDS             complement(35558..36319)
                     /gene="cysZ"
                     /locus_tag="RHX79_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HDV2196168.1"
                     /translation="MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMG
                     GAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP
                     FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYLIP
                     GIGQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSL
                     FTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR"
     gene            36549..37535
                     /gene="zipA"
                     /locus_tag="RHX79_000964"
     CDS             36549..37535
                     /gene="zipA"
                     /locus_tag="RHX79_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HDV2196169.1"
                     /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRM
                     KSKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPR
                     QPVQQPPEAQVPPQHAPRPAQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPA
                     QQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQ
                     AGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYG
                     DELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA"
     gene            37606..39621
                     /gene="ligA"
                     /locus_tag="RHX79_000965"
     CDS             37606..39621
                     /gene="ligA"
                     /locus_tag="RHX79_000965"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDV2196170.1"
                     /translation="MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRE
                     LETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL
                     KNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH
                     GENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR
                     PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED
                     RPTLGFDIDGVVIKVNSLEQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT
                     GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL
                     SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD
                     VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF
                     ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE
                     ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL
                     GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS"
     gene            39623..39841
                     /locus_tag="RHX79_000966"
     CDS             39623..39841
                     /locus_tag="RHX79_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3820 family protein"
                     /protein_id="HDV2196171.1"
                     /translation="MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAG
                     KLGELMQITLLIKTEGLTQLVQPLKRPL"
     gene            complement(39838..40836)
                     /locus_tag="RHX79_000967"
     CDS             complement(39838..40836)
                     /locus_tag="RHX79_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HDV2196172.1"
                     /translation="MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIAL
                     LFFMHGAKLSREAIIAGGGHWRLHLWVICSTFVLFPILGVLFAWWKPVNVDPMLYSGF
                     LYLCILPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGS
                     LEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVN
                     GIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLGFNKADEITIVFCGSKKSLANG
                     IPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSADKA"
     gene            40926..41852
                     /locus_tag="RHX79_000968"
     CDS             40926..41852
                     /locus_tag="RHX79_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2196173.1"
                     /translation="MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENH
                     TGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT
                     ISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCE
                     AILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN
                     IVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNR
                     SLSTAAEALWDVVRDQGNALMAGREGDPLYQI"
     gene            complement(41891..42655)
                     /locus_tag="RHX79_000969"
     CDS             complement(41891..42655)
                     /locus_tag="RHX79_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196174.1"
                     /translation="MKKHLLTLTLSSILAIPVVSHAEFKGGFADIGVHYLDWTSRTTE
                     KSSTKSHKDDFGYLEFEGGANFSWGEMYGFFDWENFYNGRHNKPGSEQRYTFKNTNRI
                     YLGDTGFNLYLHAYGTYGSANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTY
                     YTGDNGYVAGWVAGYNFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWW
                     NATSHITMGIQYRYADDKLGEDFYQDAIIYSIKFNF"
     gene            42904..43737
                     /gene="xapA"
                     /locus_tag="RHX79_000970"
     CDS             42904..43737
                     /gene="xapA"
                     /locus_tag="RHX79_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthosine phosphorylase"
                     /protein_id="HDV2196175.1"
                     /translation="MSQVQFSHNPLFCIDIIKTYKPDFTPRVAFILGSGLGALADQIE
                     NAVAISYEKLPGFPVSTVHGHAGELVLGHLQGVPVVCMKGRGHFYEGRGMTIMTDAIR
                     TFKLLGCELLFCTNAAGSLRPEVGAGSLVALKDHINTMPGTPMVGLNDDRFGERFFSL
                     ANAYDAEYRALLQKVAKEEGFPLTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVV
                     PEVISARHCDLKVVAVSAITNMAEGLSDVKLSHAQTLAAAELSKQNFINLICGFLRKI
                     A"
     gene            43797..45053
                     /gene="xapB"
                     /locus_tag="RHX79_000971"
     CDS             43797..45053
                     /gene="xapB"
                     /locus_tag="RHX79_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthosine/proton symporter XapB"
                     /protein_id="HDV2196176.1"
                     /translation="MSIAMRLKVMSFLQYFIWGSWLVTLGSYMINTLHFTGANVGMVY
                     SSKGIAAIIMPGIMGIIADKWLRAERAYMLCHLVCAGVLFYAASVTDPDMMFWVMLVN
                     AMAFMPTIALSNSVSYSCLAQAGLDPVTAFPPIRVFGTVGFIVAMWAVSLLHLELSSL
                     QLYIASGASLLLSAYALTLPKIPVAEKKATTSLASKLGLDAFVLFKNPRMAIFFLFAM
                     MLGAVLQITNVFGNPFLHDFARNPEFADSFVVKYPSILLSVSQMAEVGFILTIPFFLK
                     RFGIKAVMLMSMVAWTLRFGFFAYGDPSTTGFILLLLSMIVYGCAFDFFNISGSVFVE
                     QEVDSSIRASAQGLFMTMVNGVGAWVGSILSGMAVDYFSVDGVKDWQTIWLVFAGYAL
                     FLAVIFFFGFKYNHDPEKIKHRAVAH"
     gene            45106..>45210
                     /locus_tag="RHX79_000972"
     CDS             45106..>45210
                     /locus_tag="RHX79_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000658729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XapX domain-containing protein"
                     /protein_id="HDV2196177.1"
                     /translation="MKDILFSSGVGFGIGALFTIVRLPIPVPNVLPGIL"
BASE COUNT        10520 a        11496 c        12640 g        10554 t
ORIGIN      
        1 tatgaaagtt tatgcaccac agcgaatatc tctccattct tagtgatcta cctcaccttt
       61 taaacgcgct tgccgaattt tgttatttac tctgacgaaa aattgtcacg atacacgaaa
      121 gtttttcaca ggcggcgact catggataaa gaacgcatca ttcaggaatt tgtgcccggc
      181 aaacaggtca cactggcgca tctcatcgcg catcccggtg aggaactggc gaagaaaatc
      241 ggcgttccgg atgcgggcgc aattggcatt atgacgctaa ctcccggcga aacggcgatg
      301 atcgccggtg atttagcgct gaaagccgct gatgtgcata tcggttttct cgaccgcttc
      361 agcggtgcat tggtgattta tggctcggtg ggcgcagtag aagaagcgtt atcacaaacc
      421 gtcagcggtt taggtcgctt attaaattat acgctttgtg aaatgaccaa aagttaatac
      481 gaggcattca tgaaacgaat tgcgtttgtg ggtagcgttg gggcaggaaa aacaacgtta
      541 tttaatgcgt tgcaggggaa ttataccctc gccagaaaaa cacaggccgt ggaatttaat
      601 gataagggcg atattgatac gccgggtgaa tattttagcc atccccgctg gtatcacgcc
      661 ttaattacca cgctacagga tgtagacatg ctgatctatg tccatggcgc aaatgacccg
      721 gaaagtcggt tgcctgccgg gttgctggat attggcgtca gcaaacggca aatcgccgtc
      781 atcagtaaaa cggacatgcc agatgctgac gtcgccgcaa cgcgaaagtt attgcttgag
      841 acgggtttcg aagagccgat tttcgagcta aacagccacg acccgcaaag cgtgcagcaa
      901 ctggtggatt atctggcatc tctcaccaaa caggaggaag caggtgaaaa aactcatcac
      961 agcgaatgat attcgtgaag cacacgcgcg cggcgaacag gcaatgtccg tggttctgcg
     1021 cgccagcatt attaccccgg aagcccgtga agtggcggat ctactgggtt ttaccatcac
     1081 cgaatgtgat gaatcgatcc cggtaacggc gtccgtgccc gccagcgtgc cagccgacaa
     1141 aaccgaaagc cagcgcatcc gcgaaaccat cattgcccag ctgccggaag gccagtttac
     1201 cgaaagcctg gtcgcacagc tgatggaaaa agtgatgaag gaaaaacagt cgctggagca
     1261 gggcgcaatg cagccgagct tcaaatcggt gaccggcaaa ggcggcatca aagtgattga
     1321 tggcagcagc gtcaagtttg gtcgtttcga cggcgcagag ccgcattgcg tgggcttgac
     1381 tgatcttgtg accggagacg acggcagcag catggccgcc ggttttatgc agtgggagaa
     1441 cgcattcttc ccgtggaccc tgaactacga cgaaatcgac atggtgctgg aaggggagct
     1501 acatgttcgc cacgaaggcg aaaccatgat cgccaaagca ggcgacgtga tgtttatccc
     1561 gaaaggctcc agcatcgaat ttggtacgac atccagcgtg aaattcctgt atgtcgcctg
     1621 gccggctaac tggcaatccc tatgaaagat ttcatcaccg aagcatggct aagagcgaac
     1681 catacgctca gcgaaggcgc agagatccat ctccctgcgg acagtcgcct gacgccctct
     1741 gcccgggagt tgctggaaag ccgccatctg cgcatcaagt ttattgacga gcagggccgc
     1801 ctgtttgttg acgatgaaca gcagcagccg cagcccgttc atgggctgac cagtagcgat
     1861 gaacatccgc aggcgtgctg cgaactgtgc cgccagccgg tggcaaaaaa gccggatacg
     1921 ctgactcacc tgtcggcgga aaaaatggtc gccaaaagcg atccgcgtct gggttttcgc
     1981 gcggttctcg acagcaccat tgcgctggca gtgtggctgc aaattgaact ggcggaaccg
     2041 tggcagccgt ggctggcgga tatccgttcg cgtcttggca acattatgcg cgccgatgcg
     2101 ctgggggaac cgctgggctg ccaggcgatt gtcgggcttt ctgacgaaga tctgcatcgg
     2161 ctttctcatc agccgctgcg ctatctcgac cacgatcatc tggtgccgga agccagccac
     2221 gggcgcgatg ctgcgttgct caatctgcta cgcaccaaag tgcgggaaac cgaaaccgta
     2281 gcggcgcagg tctttatcac ccgcagcttt gaagtattac gcccggacat tttgcaggcg
     2341 ctgaaccgcc tttcgagcac ggtctacgtg atgatgatcc tgagcgtaac gaagcagccg
     2401 ctaacggtga agcagatcca acaacgactg ggggaaacgc aatgattatt gaacgttgtc
     2461 gtgaactggc gttgcgagcg cccgccagag tggtttttcc ggatgcgtta gaccaacgtg
     2521 tgctgaaagc cgcgcaatat ttacatcaac aaggtctggc aacgcccatt ctggtcgcca
     2581 atccgtttga acttcgtcag tttgcgctca gtcacggcgt ggcgatggac gggctacagg
     2641 tgattgatcc gcatggcaac ctcgcaatgc gggaagaatt tgctcatcgc tggctggccc
     2701 gcgcgggcga aaaaacgccg ccggatgcgc tggaaaaact taccgaccct ctgatgttcg
     2761 ccgcagcaat ggtcagcgcc ggtaaagcgg atgtctgtat cgcgggcaac ctctcttcca
     2821 cggcaaatgt gctgcgtgcc ggattacgca ttatcggctt gcagccaggc tgtaaaacgc
     2881 tctcttccat tttcctgatg ttgccacagt acagcggccc ggcgttgggc tttgccgatt
     2941 gcagcgtggt gccacagccg acggcggcgc agctggcgga tatcgcgctt gccagtgccg
     3001 aaacctggcg cgccatcacc ggagaagagc cgcgcgtggc gatgctgtcg ttttccagta
     3061 acggtagcgc ccgtcacccc tgcgttgcca acgtccagca ggcgacagaa atcgtccgtg
     3121 agcgcgcacc aaagctggtg gttgatggcg agttacagtt tgacgccgcc ttcgtgccgg
     3181 aagtggcggc gcaaaaagcg cctgccagcc cgctacaggg caaggccaat gtgatggttt
     3241 ttccgtcgct ggaagccgga aatattggct acaaaatcgc acaacgactc ggcggatatc
     3301 gtgccgtcgg gccattgata caaggacttg ccgcgccgat gcacgatctc tctcgtggtt
     3361 gtagcgtgca ggaaattatc gagctggcgc tggtggcagc tgtgccgcgt cagacaaaag
     3421 tgaaccgcga aagcagttta caaacactgg ttgaatgaac ggtcccgttc tggaccctga
     3481 taaagaggaa agcacaatgg aagcattagg aatgatcgaa acccggggcc tggttgcact
     3541 gattgaggct tctgacgcga tggtgaaagc tgcgcgcgtc aagctggttg gtgttaagca
     3601 gattggcggc ggcctgtgta ctgccatggt tcgtggtgat gttgcagcct gtaaagccgc
     3661 gaccgatgca ggtgccgcag cggcacagcg tatcggcgag ctggtatctg tacacgttat
     3721 cccgcgtccg cacggcgacc tggaagaagt cttcccgatc ggcctgaaag gcgatagcag
     3781 caacctgtaa tcaccctgtg tgacgtcgat tcgggcgtca cgctctctcc tttttcattt
     3841 taccttctgc ggagggtagg gggagctttt acctgaaata cgccacggag gcgggtatga
     3901 aactggcagt cgtcactgga caaattgttt gtaccgtacg ccatcacgga ctggcgcatg
     3961 acaaattgct gatggtggaa atgattgatc cacaaggtaa tcctgacggg caatgcgccg
     4021 tcgccatcga caatattggc gcgggaaccg gggagtgggt gttactggtg agtggcagtt
     4081 ccgcccgcca ggcgcataaa agcgaaacgt caccggtcga tctgtgcgtg attggcattg
     4141 tcgatgaggt ggtgtctggc ggtcaggtaa ttttccacaa ataaggcaga acatcatgaa
     4201 tcaacaggat attgaacagg tggtgaaagc ggtactgctg aaaatgcaaa gcagtgacac
     4261 gccgcccgcc gccgttcatg agatgggcgt tttcgcgtcc ctggatgacg ccgttgcggc
     4321 agccaaagtc gcccagcaag ggttaaaaag cgtggcaatg cgccagttag ccattgctgc
     4381 cattcgtgag gcaggcgaaa aacacgccag agatttagcg gaacttgccg tcagtgaaac
     4441 cggcatgggc cgcgttgaag ataaatttgc caaaaacgtc gctcaggcgc gcggcacgcc
     4501 aggcgttgag tgtctctctc cgcaggtgct gaccggcgac aacggcctga ctttaattga
     4561 aaacgcgccc tggggcgtgg tggcttcggt aactccgtcc actaacccgg cggcaaccgt
     4621 aattaataac gccatcagcc tgattgccgc gggcaacagc gtcatttttg ccccgcatcc
     4681 ggcggcgaaa aaagtctccc agcgggcgat tacgctgctc aaccaggcga ttgttgccgc
     4741 aggtgggccg gaaaacttac tggttactgt ggcaaatccg gatatcgaaa ccgcgcaacg
     4801 cttgttcaag tttccgggta tcggcctgct ggtggtaacc ggcggcgaag cggtagtaga
     4861 agcggcgcgt aaacacacca ataaacgtct gattgccgca ggcgctggca acccgccggt
     4921 agtggtggat gaaaccgccg acctcgcccg tgccgctcag tccatcgtca aaggcgcttc
     4981 tttcgataac aacatcattt gtgccgacga aaaggtactg attgttgttg atagcgtagc
     5041 cgatgaactg atgcgtctga tggaaggcca gcacgcggtg aaactgaccg cagaacaggc
     5101 gcagcagctg caaccggtgt tgctgaaaaa tatcgacgag cgcggaaaag gcaccgtcag
     5161 ccgtgactgg gttggtcgcg atgcggcgaa aatcgcggcg gcaatcggcc tgaacgtgcc
     5221 gcaagaaacg cgtttgctgt ttgtggaaac cactgcagaa catccgtttg ccgtgaccga
     5281 actgatgatg ccggtgctgc ccgtcgtgcg cgtcgccaac gtggcggatg ccattgcgct
     5341 ggcggtgaaa ctggaaggcg gttgccacca cacggcggca atgcactcgc gcaacatcga
     5401 aaacatgaac cagatggcga atgctattga taccagcatt ttcgttaaga acggaccgtg
     5461 cattgccggg ctggggctgg gcggggaagg ctggaccacc atgaccatca ccacgccaac
     5521 cggtgaaggg gtaaccagcg cgcgtacgtt tgtccgtctg cgtcgctgtg tattagtcga
     5581 tgcgtttcgc attgtttaag gagtaacaga tggcgcacga cgaacaatgg ctcaccccac
     5641 gtctgcaaac ggcggcaacg ctgtgtaacc agacgcccgc cgcgacggaa tctccgctgt
     5701 ggctgggggt ggatctgggc acctgcgatg tggtgtcgat ggttgtcgac cgcgacggtc
     5761 agccggtggc ggtatgcctc gactgggccg atgtggtccg cgacggcatc gtctgggatt
     5821 tcttcggcgc tgtcaccatt gttcgtcgcc atctcgacac gctcgagcag caattcggtc
     5881 gccgttttag ccatgcggcg acttcatttc ctccaggtac ggacccgcgt atttccatca
     5941 acgtgctgga atctgccggg ctggaagtga gccatgtgct ggatgagcca accgcagtcg
     6001 cggatctgct gcaactggac aacgccggtg tagtggatat cggcggcggc actaccggca
     6061 ttgccatcgt gaaaaagggc aaggtgacgt actcggcgga tgaagccacc ggcggacatc
     6121 acatctctct gactctcgcc ggaaatcgtc gtatttcgct ggaagaggca gagcagtaca
     6181 agcgcggtca tggtgacgag atttggcccg cggtgaaacc ggtgtacgaa aaaatggcgg
     6241 acattgtcgc ccggcatatt gaagggcagg gcattactga tttatggctg gcgggcggct
     6301 cttgtatgca accgggcgtg gcggaactgt ttcgcaaaca attcccggcg ttacaggtgc
     6361 atttaccgca gcacagtttg tttatgaccc cgctggcgat cgccagtagt gggcgagaga
     6421 aagcggaggg gctatatgca aaatgaattg cagaccgcgc tctttcaggc gttcgatacc
     6481 ctgaatctgc aacgggtaaa aacatttagc gttccaccgg tgacgctttg cggtccgggc
     6541 tcggtgagca gttgcggaca gcaagcgcaa acgcgtgggc tgaaacatct gttcgtgatg
     6601 gcagacagct ttttgcatca ggcagggatg accgccgggc tgacgcgcag cctggccgtt
     6661 aaaggcatcg ccatgacgct ctggctatgt ccggtgggcg aaccgtgcat taccgacgtg
     6721 tgtgcagccg tggcgcagtt gcgtgagtca ggttgtgacg gggtgatcgc atttggcggc
     6781 ggctcggtgc tggatgcggc gaaagccgtg gcgttgctgg tgacgaaccc ggatagcacg
     6841 ctggcagaga tgtcagaaac cagcgttctg caaccgcgct tgccgctgat tgccattcca
     6901 actaccgccg gaaccggctc tgaaaccacc aatgtaacgg tgattatcga cgcggtgagc
     6961 gggcgcaagc aggtgttagc ccatgcctcg ctgatgccgg atgtggcgat cctcgacgcc
     7021 gcattgaccg aaggtgtgcc gtcgcatgtc acggcgatga ccggcattga tgcgttaacc
     7081 catgccattg aagcatacag cgccctgaac gctacaccgt ttaccgacag tctggcgatt
     7141 ggtgccattg cgatgattgg caaatcgctg ccgaaagcgg tgggctacgg tcacgacctt
     7201 gccgcgcgcg agagcatgtt gctggcttca tgtatggcgg gaatggcgtt ttccagtgcg
     7261 ggtcttgggt tgtgccacgc gatggcgcat cagccgggcg cggcgctgca tattccgcac
     7321 ggtctggcga acgccatgtt gctgccaaca gtgatggaat ttaaccggat ggtttgtcgt
     7381 gaacgcttta gtcagattgg tcgggcactg cgaactaaaa aatccgacga tcatgacgct
     7441 attaacgcgg taagtgagct gattgcggaa gttgggattg gtaaacgact gggcgatgtt
     7501 ggcgcgacat ctgcgcatta cggtgcatgg gcgcaggccg cgcaggaaga tatttgtctg
     7561 cgcagcaacc cgcgtaccgc cagcctggag cagattgtcg gcttgtacgc agcggcgcaa
     7621 taaatgccgg atgcgacgct tgccgcgtct gatccggcct tcgggattgc acatgtaggg
     7681 cggataaggc gtttacgccg catccgccaa taaataacaa ctaacaggga gtaaaggcga
     7741 tgggaattaa cgaaatcatc atgtacatca tgatgttctt tatgctgata gctgccgtag
     7801 acaggatcct gtcgcagttc ggcggttctg ctcgtttcct cggtaagttc ggtaaaagta
     7861 tcgaaggatc aggcggtcag ttcgaagaag gctttatggc aatgggcgca ctgggcctgg
     7921 cgatggtcgg tatgaccgcg ctggcaccgg tactggctca cgtactcggg ccggtaatta
     7981 ttccggttta cgaaatgctc ggcgctaacc catcgatgtt cgccggaaca ctgctggcgt
     8041 gcgatatggg cggcttcttc ctcgccaaag agctggcggg cggcgacgta gcagcgtggc
     8101 tatactctgg gttaattctc gggtcgatga tggggccaac gattgtgttt tccattccgg
     8161 tggcgctcgg cattatcgaa ccttctgacc gtcgttatct ggcgctcggc gtgctggcgg
     8221 gcattgtgac cattccgatt ggctgtattg ctggtggtct ggttgctatg tactccggtg
     8281 tgcagatcaa cggtcagccg gtggaattca ctttcgccct gatcctgatg aacatgatcc
     8341 cggtgatcat tgttgcgatt ctggtggcgc tggggctgaa attcatcccg gaaaaaatga
     8401 tcaacggctt ccagatcttc gccaaattcc tcgttgcatt gatcaccctc ggtcttgccg
     8461 ctgcggtagt gaaattcctg cttggctggg aactgatccc cagtctggat cctatcttta
     8521 tggcccctgg cgataaaccc ggtgaggtga tgcgcgccat tgaagttatc ggttctatct
     8581 cctgcgttct gttaggggcg tatccgatgg tgctgctgct gacccgctgg tttgaaaaac
     8641 cgctgatgag cgtcggtaaa gtgctgaata tgaacaacat cgcggcagcc ggcatggtgg
     8701 caacgcttgc caacaacatc ccgatgttcg gcatgatgaa gcagatggat acccgcggca
     8761 aagtcatcaa ctgcgccttc gccgtttccg ctgctttcgc cctgggcgac cacttaggct
     8821 tcgccgctgc caacatgaat gccatgatct tcccgatgat tgtcggcaag ttgatcggcg
     8881 gcgtaacggc gattggcgtg gcgatgatgc tggtgccaaa agaagacgcg accgcgacta
     8941 aaaccgaagc ggaggcacaa tcgtgaacac tcgccagcta ttgagcgtcg gtatcgatat
     9001 cggcaccacc accacccagg tgattttctc ccacctggag ctggttaacc gtgcggcggt
     9061 gtcgcaggtg ccgcgctacg aattcattaa acgcgaaatt agctggcaaa gcccggtgtt
     9121 ctttacccct gtcgataaac agggtggttt aaaagaagcg gaactgaaat cgctgatttt
     9181 agagcaatat caggctgcgg gcattgcgcc ggaaagcgtt gattctggtg ccatcatcat
     9241 caccggtgaa agcgcgaaaa cccgcaatgc tcgcccggcg gtgatggcgc tctctcagtc
     9301 gctgggcgat tttgtcgtcg ccagcgccgg gccgcacctc gaatccgtga tcgccggtca
     9361 cggagccggg gcgcaaaccc tttctgaaca acggctgtgt cgggtactga atatcgacat
     9421 cggcggtggc accgcgaact acgccctgtt cgatgccgga aaaatcagcg gcactgcctg
     9481 tctcaacgtc ggtggtcgcc tgctggaaac cgacagccag gggcgcgtgg tttacgctca
     9541 taaaccgggg cagatgattg tggatgagtg cttcggtgca ggcactgacg cccgttcgct
     9601 gaccggcgcg cagctggtgc aggttacccg gcggatggcg gcgctgattg tcgaagtgat
     9661 tgacggaacg ctttcgccgc tcgcgcaggc attgatgcaa accggtttgc tgcccgcagg
     9721 tgttacgccc gaaatcatta cgctttctgg aggcgtgggc gaatgttatc gccaccagcc
     9781 cgccgacccg ttctgttttg ccgatattgg cccacttctg gcaacggcgc tgcatgacca
     9841 tccgcgcctg cgtgagatga atgtgcagtt tccggcgcaa accgtacgcg ccacggtgat
     9901 tggcgcgggt gcacataccc tttcgctctc tggcagcaca atctggctgg agggcgtaca
     9961 actgccgctg cgcaatttgc cggtggcgat cccgattgat gaaacggatc tggtgagtgc
    10021 ctggcaacag gcgctgcttc agctggatct tgatcccaaa actgacgcgt acgtgctggc
    10081 gcttcccgcc tcgctgcctg tgcgttacgc cgcggtactg acggtcatca acgcgctggt
    10141 cgatttcgtc gcgcgttttc cgaatccgca tcccctgctg gtggtggccg ggcaggactt
    10201 tggtaaagct ctgggcatgt tgttgcgccc acagctacaa caactcccgt tggcagtcat
    10261 tgacgaagtg attgtccgcg cgggggacta tatcgacatt ggtacgcctc tttttggcgg
    10321 atcggttgtg ccggtgacgg tgaaatcact cgcatttcct tcctgaggga acgacttatg
    10381 aaactaaaga ccacattgtt cggcaatgta tatcagttta aggatgtaaa agaggtgctg
    10441 gctaaagcca acgaactgcg ttcgggggat gtgctggcgg gcgttgcagc ggcaagctca
    10501 caggagcgcg tggcggcaaa gcaggtgttg tcggaaatga ccgtagcgga catccgcaat
    10561 aatccggtga ttgcctatga agatgactgc gtgacgcggc tgattcagga cgatgttaac
    10621 gaaacggcct acaaccagat taaaaactgg agcatcagcg aactgcgtga gtatgtgctg
    10681 agcgatgaaa ccagcgtgga cgacattgcc tttacccgca aagggctgac ctcggaagtg
    10741 gtcgcggcgg tagcgaagat ttgctccaac gcggacctga tctacggcgc gaagaaaatg
    10801 ccggtaatca aaaaggccaa taccaccatt ggtattccgg gcaccttcag cgcccgtttg
    10861 cagccaaatg acacccgtga cgacgtgcaa agtatcgccg cgcaaatcta cgaagggctt
    10921 tccttcgggg tgggcgatgc ggtgatcggc gttaacccgg tgactgacga cgtggaaaac
    10981 ttaagccgcg tgttggacac catttacggc gtgatcgaca aattcaacat cccaactcag
    11041 ggctgcgtac tggcgcacgt caccacccag atcgaagcga ttcgtcgcgg cgcgcctggc
    11101 ggactgattt tccagagtat ctgtggcagc gaaaaagggc tgaaagagtt tggcgtggaa
    11161 ctggcgatgc tcgacgaagc gcgcgcagtg ggtgcagagt tcaaccgtat cgccggggaa
    11221 aactgcctct acttcgaaac cggacaaggc tctgcgctat ccgctggcgc taacttcggc
    11281 gctgaccagg tgacgatgga agcacgtaac tatgggctgg cgcgtcatta cgatccgttt
    11341 atcgtcaaca ccgtggtcgg ctttattggg ccggagtatc tctacaacga ccgccagatt
    11401 atccgtgctg gcttagaaga tcactttatg ggcaagctga gcggcatctc tatgggctgt
    11461 gactgctgct acaccaacca cgctgacgct gaccagaacc tcaacgaaaa cctgatgatc
    11521 ctgctcgcca ccgcaggctg caactacatc atggggatgc cgctgggtga tgacatcatg
    11581 ctcaactacc agaccaccgc attccacgat accgccactg tgcgtcagtt actcaacctg
    11641 cgcccgtcac cagagtttga acgctggctg gaaagcatgg gcattatggc aaacggtcgc
    11701 ctgaccaaac gggcgggcga tccgtcactg ttcttctgat gacgcggaga taacacatca
    11761 tggatcaaaa acagattgaa gaaattgtac gcagcgtgat ggcgtcaatg ggacaaacgg
    11821 cccccgcgcc gtcagaagca aagtgcgcca ccaccaactg tgcggcaccg gtgacctcgg
    11881 aaagctgtgc gctggattta ggttctgcgg aagcaaaagc gtggattggt gttgaaaacc
    11941 cgcatcgcgc agacgtatta acagaactgc gccgcagcac cgtggcccgc gtttgtaccg
    12001 gtcgtgccgg tccgcgtcca cgtacccagg cgctgctgcg tttcctggcc gatcactctc
    12061 gttcgaaaga taccgtactg aaagaagtgc cggaagagtg ggtgaaagcg cagggcttgc
    12121 tggaagtacg ctctgaaatt agcgacaaaa atctctacct gactcgcccg gatatgggcc
    12181 gccgcctgtg tgcagaagct gttgaagcgc tgaaagcaca gtgtgttgct aatccggacg
    12241 tacaggtcgt tatttctgat ggcctgtcaa ctgatgccat caccgtgaac tacgaagaga
    12301 tcctgccgcc gctgatggcg ggcctgaaac aggccgggct gaaagtcggc acgccattct
    12361 ttgttcgtta tggtcgcgtg aagattgaag atcagatcgg tgagatcctc ggcgcgaaag
    12421 tggtgatcct gctggtgggg gaacgtccgg ggttagggca gtcagaaagc ctctcctgct
    12481 acgccgttta ctcgccgcgt atggcgacca ccgttgaggc cgatcgcacc tgtatctcta
    12541 acattcacca gggcggcacg ccgccggttg aagccgcagc cgtcattgtg gatttggcga
    12601 aacgtatgct ggagcagaaa gcatccggca tcaacatgac ccgataagga ggcatcatgc
    12661 cagctttaga tttgattcga ccgtcggtaa ccgccatgcg ggtgattgcc tccgttaacg
    12721 ctgaatttgc gcgtgaacta aaattgccgc cgcatattcg tagcctcggg ctgatttctg
    12781 ctgattccga tgacgtcacc tacattgccg ctgatgaagc gaccaagcag gcgatggtgg
    12841 aagtggtata tggtcgctcg ctgtatgcgg gcgctgcaca cggcccgtca ccgactgccg
    12901 gtgaagtgct gattatgctt ggtgggccaa acccggcgga agtgcgtgcc ggtctggatg
    12961 cgatggttgc acatattgaa aatggtgcag cattccagtg ggccaatgac gcagaaaaca
    13021 ccgccttcct ggcgcatgtg gtttcgcgta ccggttctta tctctcatca accgccggga
    13081 tcacgcttgg cgatccgatg gcgtatctgg tggcaccgcc gctggaagcg acctatggca
    13141 ttgatgcagc gttgaaatct gccgacgtac agctggtgac ctatgtcccg ccaccgtctg
    13201 aaaccaacta ctcggcagca tttttaaccg gtagccaggc cgcgtgtaaa gcagcctgta
    13261 acgcctttac cgatgcagtg ctggaaatcg cgcgtaatcc aatccagcgt gcgtaacgga
    13321 ggttgccgat gatcaatgca ctgggattgc tggaagtgga cggcatggtc gccgcgatag
    13381 atgcagcgga tgccatgctc aaagcagcta acgttcgtct gctcagtcac gaagtgcttg
    13441 accctggtcg cttaacgctg gtggtggaag gcgatctggc ggcgtgtcgt gcggcgctgg
    13501 acgcaggttg tgctgccgcg atgcgtaccg ggcgtgtcat cagccgcaag gagatcggtc
    13561 ggccagacga tgacacccag tggctggtta ctggctttaa ccgccagccg aagcaacccg
    13621 taagggaacc cgacgcgcca gttatcgtcg cggaatctgc tgacgagttg ttggcgctgt
    13681 taacatcagt acgtcaggga atgacggcag gagaagtggc tgcccacttt ggctggccgc
    13741 tggaaaaagc cagaaatgcg ctcgaacagc tcttttctgc cgggacgtta cgtaaacgca
    13801 gtagtcgtta tcgtctcaag ccccattaac ctgtcggagg tgccgggtgt cctacaacac
    13861 ccggcattaa catcatgaaa aagacccgta cagccaattt gcaccatctt tatcatgaac
    13921 ccttacccga aaacctgaag ctcacgccga aggtcgaagt ggataatgtt catcaacgac
    13981 agacaacgga tgtctatgaa catgctttaa cgattaccgc ctggcagcag atttacgatc
    14041 agctgcatcc gggcaagttt catggtgaat ttacggaaat tctactcgat gatattcagg
    14101 tttttcgtga atacaccggt ctggcgctgc gtcagtcgtg cctggtctgg ccgaactcgt
    14161 tctggtttgg cattccggcg acgcgcggtg agcagggatt tatcggttcg caatgtctgg
    14221 gaagcgcgga aatcgccacc cgccctggtg gcactgaatt tgaactgagc acgccggatg
    14281 attacacgat cctgggcgtg gtgctttctg aagatgtcat cacccggcag gctaactttt
    14341 tgcataaccc ggatcgggta ttacatatgc tgcgtagcca gtcggcgctg gaagtgaaag
    14401 agcagcataa agccgcgctg tggggctttg tccaacaggc gctggcgacg ttttgcgaga
    14461 acccggaaaa tctccatcag cctgcagtgc gaaaagtgct gggggataat ttgctaatgg
    14521 cgatgggggc gatgctggaa gacgcgcaac caatggtgac ggcggaaagc atcagtcatc
    14581 agagttaccg tagattactt tcccgcgccc gtgaatatgt gctggaaaat atgtctgagc
    14641 cggtgacggt gctggacttg tgtaatcaac tgcatgtcag tcgccgcacg ctacaaaacg
    14701 cgtttcacgc tattttaggc attggcccaa acgcgtggct gaaacgcatt cgcctgaacg
    14761 ccgtacgccg cgaactgata agcccgtggt cgcaaagcac aacggtaaaa gacgccgcca
    14821 tgcagtgggg attctggcat ctggggcaat ttgccacgga ttaccagcag ctgtttgccg
    14881 agaagccgtc gttgacgttg catcagcgga tgcgggaatg ggggtgaggg agttacaccc
    14941 aatccctgac cttaataaac tcacttaacg ccgcttctgg gctgccatct tttggctgat
    15001 aatcatactc ccagcgtacc agtggcggca ttgacatcag gatcgactcg gtgcgcccgc
    15061 cagtttgcag gccaaacaga gtaccgcgat cccagaccag attgaactcg acataacgac
    15121 cgcgacggta gagctgaaaa ttgcgctcgc gctcgccgta ggccatcgct ttacgtcgct
    15181 ctacaattgg taaataagcg tcggtgtagc ctttgcctac cgcctgcata aaggcaaaac
    15241 agtggtcgaa atctggcgtg ttcagatcat caaagaacag cccgccaata ccgcgctgtt
    15301 cgttgcgatg tttgaggtag aagtaatcgt cgcaccactt tttgtaacgg ggataaacgt
    15361 cttcaccaaa tggcaggcac aggtcacggg cggtgcggtg ccagtgaatg gcgtcttctt
    15421 caaaaccata gaaaggggtt aaatcgaagc cgccgccaaa ccaccagacg ggctctgcac
    15481 ccggtttttc ggcaataaaa aaacgcacat tcgcgtggct ggtgggaaca tacgggttat
    15541 gcggatgcac taccagtgaa acgcccatcg cctcgaaact gcgcccggca agttccgggc
    15601 gatgagcggt ggcggaagct ggcatcgcct cgccgtggac gtgagaaaag ttgacgcctg
    15661 cctgttcgaa aacaccacca ttacgcaaca cccgactacg cccgccgccg ccagcttcgc
    15721 gctgccaact atcttcgaca aattctgcgc catcgacggc ggtcagctgc tgacaaatcg
    15781 tatcctgaag gttgagcaga aactgtttaa cctggtgtgc gtcgggtttc ataacttatc
    15841 gctttttcga atgtgctttc tggttgtcga accagtggaa ataactgatc acgccttcag
    15901 caatcgctgt ggcgattttc tgacgaaacg ccgccgtgcc taacagccgc tcttcttccg
    15961 ggttggtgat aaacgaggtt tccaccagca ccgaaggaac cgacggcgat ttcaacacca
    16021 caaacgcggc ttgttcggtg ttgcggctgt gcagtttatg caccggctta atctttttca
    16081 gaatatgcga gccgagcgtc aggctgtttt taatagtatc ggtttgcacc agatcaaaca
    16141 gcacttgctg caataggtga tccttgtcag tcgccttttt accggcaact tcatcggcgc
    16201 ggttttcgcg ttcagacagg tatttcgcca ttgcgctact tgccccacgg ttagagaggg
    16261 caaataccga agcaccggca gctttcgggt tggtaaagcc atcggcatga attgacataa
    16321 acagatctgc gccatgttta tgggcgattt caacgcgatc gtaaagtggg ataaacgtat
    16381 cgccagaacg cgttaaacgc gcatcaatcc catgattacg caaaatggaa cggacgtttt
    16441 tagcaatcgc cagcaccaca tgtttttctt tcgaaccgtt gcgtccgatc gctccggtat
    16501 caattccgcc gtggcctgga tcgagaacaa cgacacgttt gccgccagat tttttggctt
    16561 tcggcttgct gtgtccgttg ctggttttta aaggttcgtc tttggcgatg gcttgcgaca
    16621 ttcctgacaa cgtcagggca gccaaaccgg ctttcagcac ctggcggcgc gaagtgagtg
    16681 tttttagtgg tttaaaagtg ctcatacggc ctgagttgta ataataaagt tccagatgtt
    16741 atatcgtatc gcgtaatccg ttacgacggt ttgatgttga gaattgtttt acttttcatt
    16801 tcaatagttg acaactcccc attatgccac tttttcaacc gattttcgtc agatattggc
    16861 taattcgacc gttcacgcca taatcagcct tttaacccgc aaaaaggtaa cgaataccat
    16921 ggagatacgc gtatttcgcc aggaagattt cgaagaggtc atcacccttt gggagcgttg
    16981 cgacttgctg cgtccgtgga acgatccgga aatggacatc gagcgtaaga tgaaccatga
    17041 cgtcagtttg tttttggtcg ctgaggtaaa cggtgaagtg gtcggaacgg tgatgggcgg
    17101 ttatgacggg catcgcgggt ctgcttatta tcttggcgtg catccagagt ttcgtgggcg
    17161 tgggattgcc aatgcgttgc ttaatcggct ggagaaaaag ctgattgctc gtggctgccc
    17221 gaaaattcag atcaatgtgc cggaagataa cgacatggtg ctcggaatgt atgaacgcct
    17281 gggatatgaa cacgccgacg tgctgagtct gggtaagcgt ttgattgaag atgaagagta
    17341 ctgagttcca tcctgtccat tatgatgcgc acggacgcct gcgtttaccc ttgctcttct
    17401 ggcttgtgct attgcttcag gcgcgaacct gggtgctgtt tgtcattgcc ggtgcgtcgc
    17461 gcgagcaggg tactgcgctg ctaaatctgt tttatcccga tcacgataat ttctggctgg
    17521 ggctgattcc aggcattccg gcggtgctgg cgtttttgtt gagcggtcgg cgggctacat
    17581 ttcctcgcac ttggcatgtg ctctattttc tgttgctgtt ggcgcaggtg gttttacttt
    17641 gctggcaacc gtggctgtgg ctgaacggtg aatccgttag cggtatcggt ctggcgctgg
    17701 tagtggcgga tattgtggcg ttaatctggc tgctgaccaa tcgacgttta cgcgcttgtt
    17761 ttaatgaaga aaaagaataa cggcactttt tggtgaattt gcactccaag caacgttatt
    17821 gaataaccaa aggaagtgac atgaaatcgc tgcgtttaat gttatgcgct atgccgttga
    17881 tgctgaccgg ctgttccacg atgtcgtcag ttaactggtc ggccgctaac ccgtggaact
    17941 ggtttgggtc gtccaccaaa gtgagcgagc agggcgttgg tgaattaacg gcgtccacac
    18001 cactgcaaga acaagccatt gccgatgcgc ttgatggcga ttatcgcctg cgcagcggaa
    18061 tgaaaaccgc gaacggcaac gtggtgcgct tttttgaagt gatgaagggc gacaacgtgg
    18121 cgatggtgat taacggcgat caaggcacga tcagtcgcat tgacgtgctg gatagcgata
    18181 ttcctgctga caccggtgtt aaaatcggta caccgtttag cgacctttac agcaaagcat
    18241 ttggcaattg ccaaaaagct gatggtgatg ataatcgtgc cgtcgaatgt aaagccgaag
    18301 gcagtcaaca tattagctac cagttcagcg gggaatggag tggtcctgaa gggttaatgc
    18361 cttcggacga taccctgaaa aactggaaag tcagtaaaat tatctggcgg cgttaatttg
    18421 cgtctgaaca aaccgccgcc gcgaaaaaac acgtaaaata gcgctcaaca atgccacgga
    18481 ttgcgtggca ttattatttt caggaggaac aatgtctcag gttcagagtg gcattttgcc
    18541 agaacattgc cgcgcggcga tttggatcga agccaacgtg aaaggggaag ttgacgccct
    18601 gcgtgcggcc agtaaaacat ttgccgacaa actggcaact tttgaagcga aattcccgga
    18661 cgcgcatctt ggtgcggtgg ttgcctttgg taacaacacc tggcgcgctc tgagcggcgg
    18721 cgttggggca gaagagctga aagattttcc gggctacggt aaaggccttg cgccgaccac
    18781 ccagttcgat gtgttgatcc acattctttc tctgcgtcac gacgtaaact tctctgtcgc
    18841 ccaggcggcg atggaagcct ttggtgactg cattgaagtg aaagaagaga tccacggctt
    18901 ccgttgggtt gaagagcgtg acctgagcgg ctttgttgac ggtacggaaa acccggcggg
    18961 tgaagagacg cgtcgcgaag tggcggttat caaagacggc gtggatgcgg gcggcagcta
    19021 tgtgtttgtc cagcgttggg aacacaacct gaagcagctc aaccggatga gcgttcacga
    19081 tcaggagatg atgatcgggc gcaccaaagt ggccaacgaa gagatcgacg gcgacgaacg
    19141 tccggaaacc tctcacctca cccgcgttga tctgaaagaa gatggcaaag ggctgaagat
    19201 tgttcgccag agcctgccgt acggcactgc cagtggcact cacggtctgt acttctgcgc
    19261 ctactgcgcg cgtctgcata acattgagca gcaactgctg agcatgtttg gcgataccga
    19321 tggtaagcgt gatgcgatgt tgcgtttcac caaaccggta accggcggct attatttcgc
    19381 accgtcgctg gacaagttga tggcgctgta agcgtttctg attcattgat taaaggccag
    19441 gcagtaacat tactgactgg cctttttatt acttttgctt taacgccgca tacacctgat
    19501 caactaccca accatacgtt gcaatcggca gctgaccgct ttcgaacata ttgggattct
    19561 tttgcggatc ggcaaccggc gaatgtggct tgttgcttaa catcacaatc gccatatgat
    19621 tcaccggatc gataacggtc accgttccgg tccagccagt gtgaccgtag gtttgcgggc
    19681 ttgccagcgt gccaaacgtc ggcgtcatgg tggcattacc attcacgcgc cagccgaggc
    19741 caaaagtggc atcttcctta gagctggtgg tgaacatctt caccgtttcc gcactgaaca
    19801 gctgcacatc gccatagccc ccgccgttca gcatcgtttg cattaacacc gcaatatcgc
    19861 cggtattgga aaacaaacct gcgtgcccgg aaacgccgcc catcgaataa aaggcttttt
    19921 catcgtgcac ctgaccccag agagtggagg tgcggatatt cgggaaatgg atcacgccat
    19981 cgcgggtatt gccgttcaat tccgtggcgg caatttgttg cggtttaaag cctttcagca
    20041 gcgggttaaa taccgtatgt gtcaggccga gcgggcgata aatcgactct tcaacatagc
    20101 ggtcaagcgg ctgaccggtg accgactcga cgataaatcc aagcagcata taatcgacat
    20161 cactgtaaat atgcttgctg ccgggctgat actccagcgg cgtgcgcttg atcatctcca
    20221 gcgtctggcc tttatcctgg gaatataacg cgcccgcgac cgctttattc ggatattgtg
    20281 ggtccgccgg gaaaccgccg ctgtgatgca gcaggtcaga aatccgcagc gtgtttttgc
    20341 ctttgatggt gtcatttgga ctatcggcaa accccggaat atatttcgca atccgatcgt
    20401 caggatgcag tttgccttcg ctcatcagct tttgcagggc gaagttcgtg gcgtacattt
    20461 tggtgtttga ggccaggtca tacagcgtcc cggtggtggc tttgacaggc tgttccatca
    20521 acacgctgcc atcgtacttt ttcgccgctc cccaggcttt gcgatacaca atctgattat
    20581 ctttaatgat cagcaggttt acgccgggat aaccggcgtc cacttgctgg ctaatccagc
    20641 gatccatctg gttaagccgt tcgacgttga accctgcttt ctctggcgaa ctttctgtca
    20701 gaacagggta ttttgcggcg ctgacgctac aactaacagc cagcagagaa agatagagca
    20761 ttgtccgttt catgatatca gtccagattg acgttacggc agccaaagag cgtggtgaaa
    20821 ataaacccgc aaacccatgc caccagaatc ccgccagcat aaaccgccat tgccggaagg
    20881 atgccttgtg cggaagtcat cagcggcagc gccaccagac cagacggccc aaaggcgctg
    20941 tttaagccca tcggcagacc ccaccaggct atcaggccga taaacaaacc gcccgctgcg
    21001 ccgcctaaac aggcggtaat aaacggtttc atgcggggca gggtgacgcc gtaaatcaac
    21061 ggttcaccaa cgcccagcag accgggaata atcgccccgc gtacctgact gcgtaatgca
    21121 ctgtgcggtt gcgcccgcca gtagagtgcc agcgccgcgc ccacctggcc cgcgcctgcc
    21181 attgaaagga tgggaaataa gctgttgaat ccctggctgt ccattaacgc gaggtaaaca
    21241 ggaataaagc cctgatgcac gccaaatacc acggcgatca ggaacagccc ggctaaaacc
    21301 gcacaaccga acggattact gttcaggtgc ataaacagcc atgacatacc ttcgaataac
    21361 cagccaccca gcggcataat gatcaggtac gcaagcgtag cggtgatcag cagggtgatt
    21421 aacgaggtca gcagcatgtc gagatcgtcc ggcataaagc ggcgcaccat gccttcaatg
    21481 cgggcgcagg cccacgcggc aatcagcacg ccgataatat tgccgcgcgg atcgatgggc
    21541 agaccaaaga aatcgtgaaa accggcgtag taaccggtgg ttgcagcggg gttataaccg
    21601 agcaaaaaga gtgcggcaat aattgcgcca ttgacgcccg tgccgccaaa tgcctgggcg
    21661 gcgttatagc ccaccagaat caccaggaaa gtgaacaaac ctttgctgaa caccttcata
    21721 aaattcagcg cgtcgggtag cgtgccctga gcatctgccg gaacgtgcat caccgtggca
    21781 attaacgtcg ctatccccag cagcagaccg gcggcaataa aaccggggat cagcggcgtg
    21841 aagatggtgg cgaatttggc gagaaattgt tgcacgccgg aggtttgttt ggcttttaac
    21901 tgacgtttgt tctgggcggc gatttctgcg gcatcctgta ccggtgcctc gcccagcagc
    21961 tcgctcatcg cttttgcggc acgatgcgct ttaccaggcc caaaaacgac ctgcacctgg
    22021 tcgctggtca aaatgacgcc cttcacgcct tccagcgttt tgatattggg atcaaccagt
    22081 gaactgtcat gtacacccag acgcaggcgc gtcatacagt taccacaact ggcgatattt
    22141 cccggtccgc cgacacgggt aagaatggtg ttcagaagtt cactgctgat ctctttggcc
    22201 atgggttatt ccttgtctaa aacctgacga ataaagccgc cgtgttgatc caggcgtttt
    22261 ttagcttctg cggcatcgag atttttcagc accatcacaa tggccgtttt acagttgcgc
    22321 tcgcaggcaa ttaacgccgc ttccgcttgt tcggcattac atccggtggc gtttttaacg
    22381 atattgacct ggcgcacatg cagtttttcg ttggtggcga ccacatcgac catcaggttg
    22441 ccgaacactt tgccagattt aatcatcagc ccggtggaaa gcatattgag caccagtttc
    22501 tgcgctgtgc ctgctttcat tcgcgaagaa ccagtgacca cttcggcacc tacaatcggt
    22561 gtaatggcaa actcggcggt ggtggaaacg gcactccccg gattacagga aattcccact
    22621 gtgcggcagc cgagctggcg tgcgtattcc agtccggcaa tcacatacgg cgtgcgaccg
    22681 ctggcagcaa tgccaaccac cacatcctgt gccgttaaat taatattttt cagatcgtta
    22741 acaccacctt cccggctatc ttcagcgcct tccaccgcgt gctgaatggc atattcgcct
    22801 ccagcaatca aaccaaccac cagacccggt ttcacgccgt aggtgggcgg acattcgctg
    22861 gcatccagaa tccccagacg accggatgtt cccgcaccga gataaatcag acgaccgccg
    22921 ccgctgacct gggcgtggat aacatcgatc gccgcggcga tatccggcag gacgcgctca
    22981 acggcaagcg gtacggtttt atcttcatcg ttgataatcc ggcacatttc cagcgtcgat
    23041 acgcggtcaa tttcagccga ggcggtgttc gagccttcag taatcatctt ttctagttgc
    23101 atcggtggtg accttactat ttacgatcaa ataattgcag atgtatggaa tcatatatcc
    23161 cgaattgaca gacttaaagg aatcattgag tctacactcg cagagtgtga agagcgtcat
    23221 aagaacttaa gcggaattta tgctgccagc ccaggagagt ggaagatgtt gtacctgacg
    23281 aaaataagca atgcggggag tgaattcacc gaaaacgagc aaaaaatcgc tgactttctg
    23341 caggccaacg tgagtgagct gcaatccgtc tcttcgcgca agatggcgaa acagctcggc
    23401 atcagccagt cgagtattgt gaagtttgcc cagaagctcg gcgcacaagg atttactgaa
    23461 ttgcgtatgg cgttaattgg cgaatacagt gccagccggg agaaaacgaa tgccacggcg
    23521 ctgcacctgc acagttcgat taccagtgat gattcgctgg aagtgattgc ccgcaaactg
    23581 aatcgcgaaa aagagctggc gctggagcaa acctgcgcgt tgttcgacta cgcgcggctg
    23641 caaaaaatca ttgatgtcat cagtaaagcg caatttattc agataacggg cctgggcgga
    23701 tcggcgctgg tggggcgcga tctgtcgttc aaactgatga aaattggata tcgcgtggcc
    23761 tgcgaagccg acacgcacgt acaagccacc gtttcccagg cgttgaaaaa aggcgatgta
    23821 caaatcgcta tctcttacag cggcagtaaa aaagagattg tcttgtgcgc agaagcggca
    23881 cgaaagcagg gggcaacggt gattgccatt acttctctgg ctgactctcc gctgcggcgg
    23941 ctggcgcatt tcacgctcga taccgtttcc ggtgaaaccg aatggcgtag ctcgtcgatg
    24001 tctacccgca cggcgcaaaa ttctgttacc gatttactgt ttgttggtct tgtgcaactc
    24061 aatgatgtcg agtcattgaa aatgattcag cgcagcagtg agctaacaca acgcctgaaa
    24121 tgatgcataa agcagcgact ggattgagat tttcctgaat tagtgagctg atccgcagca
    24181 atattttgtt tatcctgtat tttcagaggg aatggagtgt aacgctctgt attaacaagg
    24241 agagcattaa aatgggtaaa ctcacgggca agacagcact gattacgggc gcattgcagg
    24301 gaattggcga aggaattgcc agaacttttg cgcgtcatgg cgcaaaccta atcttgctgg
    24361 atatctcccc tgagatcgaa aagctggcgg acgaactgtg tggtcgtggt catcgctgta
    24421 cggcggttgt cgccgatgtg cgtgacccgg cgtcggtagc cgcagctatc aaacgcgcga
    24481 aggaaaaaga agggcgcatt gatatcctgg tgaataacgc aggcgtttgt cgtctgggca
    24541 gtttcctcga tatgagcgat gacgatcgcg atttccatat tgacatcaat attaaaggcg
    24601 tatggaacgt cacgaaggcg gtgctgccgg agatgattgc ccgcaaagat ggtcgcattg
    24661 tgatgatgtc ttcggtcact ggcgatatgg tggccgatcc tggcgaaacg gcgtacgcct
    24721 taacgaaagc ggcgattgtt ggcctgacaa aatcgctggc ggtggagtac gcgcagtctg
    24781 gtattcgcgt taacgccatt tgcccgggat acgtgcgcac accaatggcg gaaagcattg
    24841 cccgccagtc gaacccggaa gatccagagt cggtgctgac tgaaatggcg aaagcaatcc
    24901 cgatgcgtcg cctcgccgat ccgctggaag tcggcgaact ggcggccttc ctcgcatcgg
    24961 atgaatccag ctatttaacc ggtacacaga atgtgattga tggcggcagc acactgccgg
    25021 agacggttag cgtcggtatc tgattcacct ctgtttcctc cctgcatttg tggggaggat
    25081 ttcgttttaa acccggttct tattcccttt tcaacttcca aatcaccaaa cggtatataa
    25141 aaccgttact cctttcacgt ccgttataaa tatgatggct attagaaagt cattaaattt
    25201 ataagggtgc gcaatggccg ttaacttact gaaaaagaac tcactcgcgc tggtcgcttc
    25261 tctgctgctg gcgggccatg tacaggcaac ggaactgctg aacagttctt atgacgtctc
    25321 ccgcgagctg tttgccgccc tgaatccgcc gtttgagcaa caatgggcaa aagataacgg
    25381 cggcgacaaa ctgacgataa aacaatctca tgccgggtca tcaaaacagg cgctggcgat
    25441 tttacagggc ttaaaagccg acgttgtcac ttataaccag gtgaccgacg tacaaatcct
    25501 gcacgataaa ggcaagctga tcccggccga ctggcagtcg cgcctgccga ataatagctc
    25561 gccgttctac tccaccatgg gcttcctggt gcgtaagggt aacccgaaga atatccacga
    25621 ttggaacgac ctggtgcgct ccgacgtgaa gctgattttc ccgaacccga aaacgtcggg
    25681 taacgcgcgt tatacctatc tggcggcatg gggcgcagcg gataaagctg acggtggcga
    25741 taaagccaaa accgaacagt ttatgaccca gttcctgaaa aacgttgaag tgttcgatac
    25801 cggcggtcgt ggcgcaacca ccacttttgc cgagcgtggc ctgggcgatg tgctgattag
    25861 cttcgaatcg gaagtgaaca acatccgtaa acagtatgaa gcgcagggct ttgaagtggt
    25921 gattccgaaa accaacattc tggcggaatt cccggtggcg tgggttgata aaaacgtgca
    25981 ggccaacggt acggaaaaag ccgccaaagc ctatctgaac tggctctata gcccgcaggc
    26041 gcaaaccatc atcaccgact attactaccg cgtgaataac ccggaggtga tggacaaact
    26101 gaaagacaaa ttcccgcaga ccgagctgtt ccgcgtggaa gacaaatttg gctcctggcc
    26161 ggaagtgatg aaaacccact tcaccagcgg cggcgagtta gacaagctgt tagcggcggg
    26221 gcgtaactga tgtttgctgt ctcctccaga cgcgtgctgc cgggctttac cttaagcctc
    26281 ggcaccagtc tgctgtttgt gtgcctgatt ttgctgctgc cgctctccgc gctggtgatg
    26341 caactggccc agatgagctg ggcgcagtac tgggaggtga tcaccaaccc gcaggtggtc
    26401 gcggcctaca aagtaacgct gctgtcggcg tttgtggcat cgatttttaa cggcgttttc
    26461 ggtctgctga tggcgtggat cctaacccgc tatcgcttcc caggccgcac gctgcttgat
    26521 gcgctgatgg atttaccctt tgcgctgcca acggctgtcg ccggtttaac gctggcctcg
    26581 ctcttttccg taaacggttt ttacggtgaa tggctggcga agtttgatat caaagtcacc
    26641 tatacatggc tggggattgc ggtggcgatg gcctttacca gcattccgtt tgtggtgcgt
    26701 accgtgcagc cggtgctgga agagttaggc ccggaatatg aagaagcggc ggaaacgctt
    26761 ggtgcaacgc gctggcagag tttctgcaaa gtggtgctgc cggagctttc tccggcgctg
    26821 gtggcgggcg tggcgctgtc gtttacccgt agtcttggtg aatttggcgc ggtgattttt
    26881 atcgccggaa atatcgcgtg gaagacggaa gtgacgtcgc tgatgatttt tgtgcgcttg
    26941 caggagtttg attacccggc ggcgagcgcg attgcttcgg tgatcctcgc ggcatccctg
    27001 atactgctgt tctcaattaa cactctgcaa agtcgctttg gtcggcgtgt ggtaggtcat
    27061 taatggcgga agtgacacaa ttgaagcgtt atgacgcgcg cccgattaac tggggcaaat
    27121 ggtttctgat tggcatcggg atgctggtat cggcgttcat cctgctggtg ccgatgattt
    27181 atatcttcgt acaggcgttc agcaaagggc tgatgcctgt tttacagaat ctggccgatc
    27241 cggatatgct gcacgccatc tggctgacgg tgatgatcgc gctgattgcc gtaccggtaa
    27301 acctggtgtt cggtattcta ctggcgtggc tggtgacgcg ctttaacttc cccggacgcc
    27361 agttgctgct gacgctgctg gacattccgt ttgccgtgtc gccggtggtt gccggtctgg
    27421 tgtatttgct gttctacggc tctaacggcc cgctcggcgg ttggctcgac gagcataacc
    27481 tgcaaattat gttctcctgg ccgggaatgg tgctggtcac catcttcgtg acgtgtccgt
    27541 ttgtggtgcg cgaactggtg ccggtgatgt taagccaggg cagccaggaa gacgaagcgg
    27601 cgattttgct tggcgcgtcc ggctggcaga tgttccgtcg cgtcacatta ccgaacatcc
    27661 gctgggcgct gctttatggc gtggtgttga ccaacgcccg cgcaattggc gagtttggcg
    27721 cggtgtcggt ggtttccggc tcgattcgcg gcgaaaccct gtcgctgccg ttacagattg
    27781 aattgctgga gcaggactac aacaccgtcg gctcctttac cgctgcggcg ctgttaacgc
    27841 tgatggcgat tatcaccctg tttttaaaaa gtatgttgca gtggcgcctg gagaatcagg
    27901 aaaaacgcgc acagcaggag gaacatcatg agcattgaga ttgccaatat taagaagtcg
    27961 tttggtcgca cccaggtgct gaacgatatc tcactggata ttccttcagg tcagatggtc
    28021 gcgttgctgg ggccgtccgg ttccgggaaa accacgctgc tgcgcattat cgccgggctg
    28081 gagcatcaaa ccagcgggca tattcgcttc cacggcaccg acgtcagccg cctgcacgcg
    28141 cgcgatcgca aggtcggttt cgtgttccag cattacgcgc tgttccgcca tatgacggtg
    28201 ttcgacaata tcgcttttgg cctgacggtg ctgccacgtc gcgagcgccc gaatgccgca
    28261 gccatcaaag cgaaagtgac aaaattgctg gagatggtgc agcttgctca tctggcagat
    28321 cgttatccgg cacagctttc cggcggccag aaacagcgcg tggcgctggc gcgcgcgctg
    28381 gctgtagaac cgcaaattct gctgcttgat gaaccgtttg gcgcgctgga tgcgcaggtg
    28441 cgtaaagagc tgcgtcgctg gctgcgtcaa ctgcatgaag agctgaaatt caccagcgtg
    28501 ttcgtgaccc acgaccagga agaggcgacc gaagtagccg atcgtgtagt ggtgatgagt
    28561 caggggaata ttgaacaggc tgatgcgccg aatcaggtat ggcgcgaacc agcgacccgt
    28621 tttgtactcg aatttatggg cgaagtgaac cgcctgcagg gaaccattcg cggcgggcag
    28681 ttccatgttg gcgcgcatcg ctggccgctg ggctacacac ctgcgtatca gggtccggtg
    28741 gatctcttcc tgcgcccgtg ggaagtggat atcagccgcc gtaccagtct cgattcgccg
    28801 ctgccggtac aggtactgga agccagcccg aaaggtcact acacccaatt agtggtgcag
    28861 ccgctggggt ggtacaacga accgctgacg gtcgtgatgc atggcgacga tgccccgcag
    28921 cgtggcgagc gtttattcgt tggtctgcaa catgcgcggc tgtataacgg cgacgagcgt
    28981 atcgaaaccc gagatgagga acttgctctc gcacaaagcg cctgataggt tgagtgaatg
    29041 ttaaacgccc ggaggcgctt cccgcgatcc gggcttttta atggcaaggt ttgtaacctg
    29101 tagacctgat aagacgcgca agcgtcgcat caggcaacac cacgtatgga tagagatcgt
    29161 gagtacatta gaacaaacaa taggcaatac gcctctggtg aagttgcagc gaatggggcc
    29221 ggataacggc agtgaagtgt ggttaaaact ggaaggcaat aacccggcag gttcggtgaa
    29281 agatcgtgcg gcactttcga tgatcgtcga ggcggaaaag cgcggggaaa ttaaaccggg
    29341 tgatgtctta atcgaagcca ccagtggtaa caccggcatt gcgctggcaa tgattgccgc
    29401 gctgaaaggc tatcgcatga aattgctgat gcccgacaac atgagccagg aacgccgtgc
    29461 ggcgatgcgt gcttatggtg cggaactgat tcttgtcacc aaagagcagg gcatggaagg
    29521 tgcgcgcgat ctggcgctgg agatggcgaa tcgtggcgaa ggaaagctgc tcgatcagtt
    29581 taataatccc gataaccctt acgcccatta caccactacc gggccggaaa tctggcagca
    29641 aaccggcggg cgcattaccc attttgtctc cagcatggga acaaccggca ctatcaccgg
    29701 cgtttcacgc tttatgcgcg aacaatccaa accagtaacg attgttggcc tgcagccgga
    29761 agaaggcagc agtattcccg gcattcgccg ctggcctgcg gaatatctgc cggggatttt
    29821 caacgcttct ctggtggatg aggtgctgga tattcatcag cgcgatgcag aaaacaccat
    29881 gcgcgaactg gcagtgcggg aaggaatatt ctgtggcgtc agctccggcg gcgcggttgc
    29941 cggagcactg cgggtggcaa aagctaaccc tggtgcggtg gtggtagcga tcatctgcga
    30001 tcgtggcgat cgctaccttt ccaccggggt gtttggggaa gagcatttta gccagggggc
    30061 ggggatttaa gattattgcg caggcaccgt tttatccgtc tgcgcaatta gcgcatgtaa
    30121 aaaaggctgt gcgttctcat cgctcttacc ggggatcttc acaatatacg gcttcccggt
    30181 aatcgatgac gacgaagcaa ccttatcaat aaactgctcg gcagtgtcaa tgcggttacg
    30241 ggtattgccc agcttcagac gcagatgaga aaccgcttca tcgcaggtat gttcatcacc
    30301 gttgcgcaca aatatcaaat cctttttctg tgctaatccc tccagcatgg cgttgatgcg
    30361 ggcttcttca tgggcagtta acttcgcgta agcggggagt gtcattagta gtgtaatgac
    30421 cagacaaatg attttcttca ttgaattacc ttatccttgt tttgtgatag ccgatttgac
    30481 tgccagaatc aggtaaagtt tcggttggaa tacgatgagg atcatcggca aggagaaaaa
    30541 attaaatgag tagtttgttg ttgtttaacg ataagagcag ggcgctgcag gcggatatcg
    30601 tcgccgtgca gtcgcaggtg gtttacggca gcgtgggcaa cagcattgcc gtgcctgcta
    30661 tcaaacagaa cggtctgaat gtttttgccg tgccgacggt attgctgagc aatacgccgc
    30721 attatgacac tttctacggt ggtgcgattc cggatgaatg gtttagcggt tatttgcgtg
    30781 cgcttcagga gcgtgatgcg ctgcgccagc tgcgcgctgt aaccacgggc tatatgggaa
    30841 cggcatcgca aatcaaaatc cttgccgagt ggctgactgc gctacgcaaa gaccatcctg
    30901 acctattgat catggtcgat ccggtgattg gcgatattga tagcggaatt tatgtcaaac
    30961 ctgaccttcc cgaggcgtat cgacaatatt tactgccgct ggcgcaggga attaccccca
    31021 atatctttga gctggaaatc ctgaccggta aaaattgccg cgatctcgac agtgccattg
    31081 ctgccgcaaa aagtctgctt tcagacacat taaaatgggt ggtgattacc agcgcctccg
    31141 gtaatgaaga aaatcaggag atgcaggtgg tggtggtcag tgccgacagc gtgaatgtca
    31201 tttcccattc acgggtaaaa accgacctga aagggactgg cgacctgttt tgtgctcagc
    31261 ttatcagtgg tttgctgaaa gggaaggcgt taaacgatgc ggtgcaccgt gcggggttgc
    31321 gcgtactgga agtgatgcgc tacacccagc agcatgagag cgatgaattg attttgccgc
    31381 cgctggcgga agcataaaaa atggcgccga tgggcgccat ttttcactgc ggcaagaatt
    31441 acttcttgat gcggataacc ggggtttcac ccacggttac gctaccggac agtttgatca
    31501 gttctttgat ttcgtccatg ttggagataa caaccggagt cagggtagac ttggctttct
    31561 cttccagtag cggcagatca aattcaatga cagtatcgcc aactttcacg cgctgacctt
    31621 cttcagcaat acgcttgaag ccttcgcctt tcagttcaac ggtgtcgata ccgaagtgga
    31681 cgaacagttc aacgccgcta tcagattcga tagagaacgc gtgattggtt tcaaagattt
    31741 taccaatggt accgtctaca ggcgcgacca ttttgttacc cgttggtttg atagcaatac
    31801 catcaccaac gattttttcc gcaaaaacga catccggcac gtcttcgata ttgacgatct
    31861 cgccagagag cggagcaatg atctcaatag ttccggtatc cttcttgtcg tcggaaacca
    31921 gagatttcag tttatcgaac aaacccatga tcttctccta agcagtaaat tgggccgcat
    31981 ctcgtggatt agcagattgt tttttcttca atgaacttgt taaccagcgt cattaactcg
    32041 tccgttgtcg gttgagcaag agcctgctct gctaacacct tcgcatcttc gaagttcgtg
    32101 ttacggataa tcttcttaat gcgcgggata gaaatggcgc tcatagagaa ttcgtccaga
    32161 cccatcccca gcaacagaag tgtagcacgt tcatcgccag caagctcacc acacatgcca
    32221 gtccatttgc cttcagcatg agaagcatca ataacttgct tgatcaagtt cagcacggac
    32281 ggtgacattg gctggtaaag gtgtgaaatc atatcattac cacggtcaac tgccagagtg
    32341 tactgcgtta aatcattggt gccgatacta aagaaatcaa cttctttggc taaatgacgt
    32401 gcaattgttg cggcagccgg tgtttccacc attacgccga tttcaattga ctcgtcaaac
    32461 gctttacctt cgtcgcgcag ttcctgtttg tagatttcga tctctttgcg cagtgcacgc
    32521 acttcttcaa cagagatgat catcgggaac ataatgcgca atttaccgaa agccgaggca
    32581 cgcaggatag cgcggagctg atcgcgcagg atctctttac gatccatcgc gatacggata
    32641 gcgcgccagc cgaggaacgg gttctcttct ttcgggaagt tcatgtatgg cagctctttg
    32701 tcgccgccga tgtccatggt acgaacgata accgcctgcg agccacacgc ttcagccact
    32761 gctttgtaag cagcaaactg ttcttcttca gtgggcagcg cgtcgcggtc catgaacagg
    32821 aactcagtac gatacagacc aacgccttca gcgccgttac gctctgcacc ttcaacgtca
    32881 cgaaccgtac caatgttagc gcacacttct acctggtgac cgtccagcgt aatagctggc
    32941 agatctttca gtttagcaag ctctgctttt tcagaagcca cttgctcctg aacagcgcgc
    33001 attttatcaa taacttcgtt ggttggattg acgtaaacct gattatttac ggcatccaga
    33061 atcagatagt cgtcattttt cacctgagag gtgacgctac cggtacccac gatagcaggc
    33121 agttccagag aacgcgccat gatagaggtg tgggaagtac ggccacccgc gtcggtgatg
    33181 aaacccagca ccttcttcag gttcagctgt gcggtttcgg acggcgtcag gtcagcggca
    33241 accagaatga cttcatcctg aatggcgctc aggtcgataa tcttcaggcc caggatgttg
    33301 cgcagcaggc gcttaccgat atcacgtacg tcagccgcac gttctttcag gtattcatca
    33361 tccagctctt ccagggcaga agcctgacct tcgataactt catgagcagc tgcgtcagct
    33421 gtcatgtgct tatctttaat cagggctatg atttcctgct ccagctcctc atcttcgagc
    33481 agcataatat gcccttcaaa gatggcttct ttttcttcac cgaacgtttc accagctttc
    33541 gttttgatcg tttccagctg ggctgatgcc ttggcacgac cgctcagaaa acgttcaact
    33601 tcctgatcaa cctggtcggc agaaattttt ttccggtcaa tgacaatttc gtcttctttc
    33661 agaagcagag ctttaccgaa agcgataccc ggggatgcta aaatgcctga aatcataacc
    33721 ctaccttact tgtgactgat ttttaaaaga acccgggaaa ttactcgagt tccgccatca
    33781 gtttaaccag atgttcaacc gctttctgct cgtcttcgcc ttctgcggag atagtcacaa
    33841 cggtaccttg agtcaggccc agagtctgca gtttaaacag gcttttcgcg ctggcgcttt
    33901 tgccgttgga agtcacagta atttcagaag tgaagccctt agcttctttt acaaactggg
    33961 cagcagggcg ggtgtgcaga ccgttcggag cggtaatggt aacttcttgc tggaacattg
    34021 tatttcccca acttataggt ttagtgttgt ggaactaaag tctagcctgg cggttcgact
    34081 ttagcctgta ttgttagcgc cagtttttaa cagacgcgac gcacgaagag cgcaatacag
    34141 tccattgctg gcgggtgttg accgctgacg tttcgtacgt cattaaacat tatgccgcta
    34201 aaggaagaat tgaaccaaat cataaaatcg attcagcttt ggcttttcct gtaacgatta
    34261 atttcgcgca tcaaaataat tagtctggtt aaataccagt tccgacaggc tgaatcaatg
    34321 ccaggagggg cgaaagtttg aagcaggcca caaaaaagca cctaaaaagg tgctttttta
    34381 cgcattttta acaagctggc attactgttg cagttctttc tcagtgaaga gatcggcaaa
    34441 caatgcggtg cttaaataac gctcacccga tgacggtaga ataaccacaa tattcttgtt
    34501 ggtaaagctt tcatcttctt gtagtttcaa cgccgcagca acagctgctc cagaagagat
    34561 acctgcaaga ataccttctt cttccatcag acgacgcgcg gtagaaatcg cttcttcatt
    34621 ggtgatgcca atgactttat cgaccagctt gagatcgagg ttagctggga taaaaccagc
    34681 gccaataccc tgaattttat gcgggccagg tttaatctct tcaccagcca gtgcctgggc
    34741 gataactgga gaatcggttg gctcaacggc gacagagata agatcggtct tgcctttggt
    34801 gcctttaatg tagcggctga cgccagtcag cgtaccgcca gtcccaacgc cagcaataaa
    34861 tacatcaacc tgaccgtcgg tatcttccca gatctccgga ccggtggttt tttcgtgaat
    34921 ttcagggttt gccggattgc tgaattgttg cagcagcagg tatttctctg gattgctggc
    34981 gacaatttct tctgcttttt ggattgcgcc tttcatgcct ttagcacctt ccgtcagcac
    35041 caggtttgca cctaacgctt tcagcagctt gcggcgttca atactcatgg tttctggcat
    35101 ggtcagggtg agtttgtaac cgcgagcggc agctacatag gccagtgcaa tcccggtatt
    35161 accgctggtt ggttcaacca gttcaacgcc tggtttcagc acgccgcgct tttcggcatc
    35221 ccaaatcatg ttggcaccga tacggcactt aacgctgaag ctggggttac gagattccac
    35281 cttcgccaga atgcgtccgt taccgatgcg attcaggcga accagcggcg tgtgaccgat
    35341 agtcagcgag ttatcttcaa aaatcttact catggcctgt ccttaactgt atgaaattgg
    35401 gatacaacag gtagcatacc cgctcagaga atatgcggaa gtaaggattt agcatatcta
    35461 tatacagaag ggaaataatg acatgcaaga tggaataagg ggcggcataa gccacccctg
    35521 tttcacacaa acggtttaca aaataaccgg tagattgtta ccgccacatc gcgtgtttat
    35581 cgcgatagca atcgacccac atcgccgtcg cgccacaaac ggcaacgggc atgatgaaca
    35641 gattaagcag cgggatcatc gtaaacaggc tggttaaagc accaaactgc atattggtga
    35701 ttttgcgtgt gcgcagggcg gtgcgcatct ctttaaacgg cactttgtgg ttatcgaagg
    35761 ggtaatcgca atactggatg gctaacatcc aggcgctaaa caggaaccac agtaccggcg
    35821 cgacggtttg cccaatacca gggattaagt aaagaattag caatacaatt gcgcgcggca
    35881 gataccaggc aaatttttgc cattcgcgtt tcatgattcg cggcacatct ttcatgatac
    35941 cgaaaatccc ggtatctggc ggtgtagcgc cagtcaatcg tgcttccagt tgttcagcca
    36001 ataaaccgtt aaacggagcg gcaatccagt tagcaatcgt ggagaagaaa tagccaaaca
    36061 ctaacagcac agagatgaca gccagaggcc acaacagata actcagccat tgtagccagt
    36121 ccggaacgta actcatgaga gtcgggatcc agacatcgag ctgtgtaaag agccaccaga
    36181 atgcgccccc catcaacaaa atattgacca gcagcggtaa aataacgaaa cgccgaatcc
    36241 caggttgcga gacgagcttc cagccttgcg caaaatagta aaaaccgctg cgtggggcag
    36301 atgtgaatga tgaaaccata atcaggatga gctccttttg accaatccca ggaaaattct
    36361 gcgtatttta ccgggtaatt gcgcaatgga cagttaggat atgttcgaaa aaacagcaaa
    36421 aagcacgatt tcatctatct ttgtgctgtg aaagttaata gtgcacttgc acttgaggta
    36481 atcggcaaat actcttagtg agtaaatgtt tgccgtggtg gcaaggtgtt agaacaacag
    36541 agaatataat gatgcaggat ttgcgtctga tattaatcat tgttggcgcg atcgccataa
    36601 tcgctttact ggtacatggt ttctggacca gccgtaaaga acgatcttct atgttccgcg
    36661 atcggccatt aaaacgaatg aagtcaaaac gtgacgacga ttcttatgac gaggatgtcg
    36721 aagatgatga gggcgttggt gaggttcgtg ttcaccgcgt gaatcatgcc ccggctaacg
    36781 ctcaggagca tgaggctgct cgtccgtcgc cgcaacacca gtaccaaccg ccttatgcgt
    36841 ctgcgcagcc gcgtcaaccg gtccagcagc cgcctgaagc gcaggtaccg ccgcaacatg
    36901 ctccgcgtcc agcgcagccg gtgcagcagc ctgcctatca gccgcagcct gaacagccgt
    36961 tgcagcagcc agtttcgcca caggtcgcgc cagcgccgca gcctgtgcat tcagcaccgc
    37021 aaccggcaca acaggctttc cagcctgcag aacccgtagc ggcaccacag cctgagcctg
    37081 tagcggaacc ggctccagtt atggataaac cgaagcgcaa agaagcggtg attatcatga
    37141 acgtcgcggc gcatcacggt agcgagctaa acggtgaact gcttcttaac agcattcaac
    37201 aagcgggctt catttttggc gatatgaata tttaccatcg tcatcttagc ccggatggca
    37261 gcggcccggc gttattcagc ctggcgaata tggtgaaacc gggaaccttt gatcctgaaa
    37321 tgaaggattt cactactccg ggtgtcacca tctttatgca ggtaccgtct tacggtgacg
    37381 agctgcagaa cttcaagctg atgctgcaat ctgcgcagca tattgccgat gaagtgggcg
    37441 gtgtcgtgct tgacgatcag cgccgtatga tgactccgca gaaattgcgc gagtaccagg
    37501 acatcatccg cgaagtcaaa gacgccaacg cctgatacac ttaaggcaaa ttaactcctc
    37561 ttcgaacccc cgcttgtcgg gggtttttag cattgatggt gcgatatgga atcaatcgaa
    37621 caacaactga cagaactgcg aacgacgctt cgccatcatg aatatcttta tcatgtgatg
    37681 gatgcgccgg aaattcccga cgctgaatac gacaggctga tgcgcgaact gcgcgagctg
    37741 gaaaccaaac atccagaact gattacgcct gattcgccta cccaacgtgt aggcgctgcg
    37801 ccgctggcgg ctttcagcca gatacgccat gaagtaccaa tgctgtcact ggataacgtt
    37861 tttgatgaag aaagctttct tgctttcaac aaacgtgtgc aggaccgtct gaaaaacaac
    37921 gagaaagtca cctggtgctg tgagctgaag ctggatggcc ttgccgtcag tattctgtat
    37981 gaaaatggcg ttttagtcag tgctgcgacc cgtggcgatg gcaccaccgg ggaagatatc
    38041 acgtctaatg tgcgtactat tcgcgctatt ccgctgaagc tgcacggaga gaatatcccg
    38101 gcgcgtctgg aagtgcgtgg tgaagtgttc ctgccgcagg cggggttcga aaagattaac
    38161 gaagatgcgc gacgcacggg cgggaaagtt tttgctaacc cacgtaatgc ggcagctggt
    38221 tcactgcgtc agcttgatcc gcgtattaca gcgaagcgac cgctcacttt tttctgctat
    38281 ggcgttggtg ttctggaagg tggcgagctg ccggatactc atcttggccg tttactgcaa
    38341 tttaaaaagt gggggttgcc ggtcagcgat cgggtaacgc tttgtgaatc ggcggaagaa
    38401 gtgctggcgt tctatcacaa agtggaagaa gaccgcccga cgctgggctt tgatatcgac
    38461 ggcgtggtga ttaaggtcaa ctcactggaa cagcaggagc agcttggctt tgtcgcgcgt
    38521 gccccgcgct gggcggtagc gtttaaattc ccggcgcagg agcagatgac ctttgtgcgt
    38581 gacgtcgagt ttcaggttgg gcgtactggc gcgattacgc ctgttgcgcg tctggaacct
    38641 gtccatgttg ctggcgtgct ggtgagtaac gcaaccttac acaatgcgga tgaaatcgaa
    38701 cgtcttggtt tacgcattgg cgataaagtg gtgattcgcc gcgctggcga cgtgatcccg
    38761 caggtggtta acgtcgtgct ttctgaacgc ccggaagata cccgtgaggt tgtattcccg
    38821 acgcattgtc cggtatgtgg ttctgacgtt gagcgtgtgg aaggtgaagc ggttgcccgc
    38881 tgtaccggtg gcctgatttg cggagcgcag cgtaaagagt cgctgaaaca ctttgtttcc
    38941 cgccgtgcga tggatgttga cggaatgggc gacaaaatca tcgatcagct ggttgaaaaa
    39001 gaatatgtcc atactccggc agatctgttc aaactcaccg caggcaaact gaccggactg
    39061 gagcgtatgg ggccaaaatc ggcacaaaac gtggttaacg cgctagaaaa agcgaaagaa
    39121 accacctttg ctcgcttcct ctatgcactt ggcatccgtg aagtcggcga ggccaccgca
    39181 gcaggtctgg cggcatattt cggcacgctg gaagcgctgg aagccgcttc gattgaagag
    39241 ctgcaaaagg tgcctgatgt tggcattgtc gttgcatccc acgttcacaa cttctttgcc
    39301 gaagaaagca accgcaatgt catcagcgag ctgttggcgg aaggtgttca ctggcctgcg
    39361 ccgatcgtta tcaacgcgga agagattgac agcccgtttg ctggtaaaac cgtggtgctt
    39421 acgggcagct taagccagat gtcgcgtgat gacgctaaag ctcgactggt tgaactgggc
    39481 gcgaaagtcg cgggcagcgt gtcgaagaaa accgatctgg tgattgccgg agaagcggca
    39541 ggttctaaac tggcgaaagc gcaggaactg ggcattgaag tcatcgacga agcggaaatg
    39601 ctgcgtttgc tgggtagctg agatggaaaa agagcagctg attgaaatag ccaatacgat
    39661 aatgccgttt ggcaaatata aagggcgtcg cttaatcgac ctgccggagg agtatctgct
    39721 gtggtttgcc cgcaaagatg aattcccggc agggaagctc ggtgagctaa tgcaaatcac
    39781 gctgctgatt aaaaccgagg ggctgacgca actggtccag cccctgaagc gtccgcttta
    39841 agctttatcg gcgctgcttt cctgctgtgc ctgtaactgt tcggtctggc gtttgtatcg
    39901 acgcgccagc accgcacaga ccatcaattg gatctgatgg aaaatcatta ggggcagcac
    39961 catcataccg atcaccgatg tggggaacag aatgtttgcc atcgggatgc catttgccag
    40021 actctttttc gaaccacaaa agacgatagt aatttcatct gccttattga agcccagtcg
    40081 gcgtgccata aagacgttaa ctacaatcac gatagccaga agaacgcagc tgaccaccac
    40141 gataaacagc aatgatcccc agccaacttt atgccagata ccattaacga cggcttcgct
    40201 gaacgctgta taaaccacca acagaatgga cgtctggtca gttttcgcaa tccatttttt
    40261 attgcgcgac acccagtcac caatccacgg ccgggaaaga tgccccaaca caaacggcag
    40321 cagcagttgc agcataattt taccgacctg ctcaaggctg ccccctgcac cgtgaacatt
    40381 catcaccaga ccaaccagca atggtgaaag gaaaatcccc agcaggctgg atgctgacgc
    40441 agaacaaacc gccgccgcga cgttaccgcc cgccattgac gtgaaggcga ttgcagactg
    40501 cacggtagcc gggagaatgc acaagtagag aaaaccggag tagagcatcg ggtcgacatt
    40561 taccggtttc caccaggcaa acagtacacc cagaatcgga aacagcacga aggtgctgca
    40621 aattacccac aaatgcagtc gccagtgacc accgccagca ataatcgcct cacgcgacaa
    40681 cttcgcgccg tgcataaaga acagcagggc aatcgctgcg gtggtcagat tttcaaagaa
    40741 ggggacgaaa tcgcctctgg ccggaaagaa agaggccagc aacaccaccg tgatcagggt
    40801 taaggtgaaa ggatcgagga tacgaaaaag tttcataaag actccagatg atcgatggtt
    40861 ctattgtgct tcttccagtt tgagaaataa aattgattta ttgcatccat tcatgaagaa
    40921 aacagatgaa ttattcttta aaacaattaa aggttttcgt cacagtagcg caggagaaaa
    40981 gttttagtcg tgcaggagag cgtatcggcc tgagccagtc ggcagtgagt cacagtgtga
    41041 aggaactgga aaatcatact ggtgttcgcc tgctggacag aaccacgcgt gaagtggtgc
    41101 ttacagatgc agggcagcag ctggctttgc gtcttgagcg actgctggat gaactgaaca
    41161 gcacgttgcg cgataccggg cgtatggggc aacaactgag cggaaaagtt cgggtcgctg
    41221 ccagccagac catttccgcg catcttattc cgcaatgcat tgctgaaagc catcgccgct
    41281 atccagatat tcagtttgtc ctgcacgatc gtccgcagca gtgggtgatg gaaagtattc
    41341 gccagggaga tgtcgacttt ggcatcgtca tcgatccagg cccagtgggc gatctgcaat
    41401 gtgaagcgat tctttccgag cctttctttc tgctttgcca tcgcgatagc gctttggccg
    41461 tcgaagatta tgtaccctgg caggcattac agggagcgaa attggtgttg caggattacg
    41521 cgtcaggcag ccgaccgctg attgacgcag cgctggcgcg caatggtatt caggcgaata
    41581 ttgtgcagga gattggacat ccggcgacgc tgttcccgat ggtagccgca ggcatcggca
    41641 tcagtattct tcccgcactg gcgctaccat tgcctgaagg tagcccactg gtggtaaagc
    41701 gcattacgcc ggttgttgaa cgccagttga tgctggtgcg caggaagaac cgttcacttt
    41761 ccaccgccgc tgaagcgtta tgggacgtgg tacgagacca gggcaatgcg ctaatggctg
    41821 gtcgggaagg ggatccgttg tatcagatat agagtgaatt catactgccg ggagccccgg
    41881 cagtaatcaa tcagaagtta aatttgatgg agtagattat cgcatcctgg taaaaatctt
    41941 cgcccagttt gtcatccgca tatcgatact gaatccccat agtaatgtgt gatgttgcat
    42001 tccaccacag tgcaactgcg ccattcagcc cttctttacc gccattaccc gctgcatagg
    42061 tagcgtcacg gtcaaactcg tactcgttcc agttggtaag agtgaatttc tcgctgccca
    42121 gcataaagtt gtaacctgca acccagccgg cgacatagcc gttgtcgcca gtgtaatagg
    42181 tttgatctgt ataacgctta gcaaagaacg gtttgaacca ccaaccgctg ccggtgaaat
    42241 tgtagccgat accgtacagg aacatatcgt cgtggaaatt cacgcgattc gcagaaccgt
    42301 aggtgccata cgcatgcaag tagagattaa atccggtgtc acccaggtaa atacggttgg
    42361 tatttttaaa ggtataacgc tgctcgctac ctggtttatt atggcgaccg ttatagaagt
    42421 tttcccagtc gaagaacccg tacatttctc cccaactaaa gttagcgcca ccttcaaatt
    42481 caagataacc aaaatcatct ttgtgtgatt tggtcgacga tttttcggta gtccggctgg
    42541 tccagtccag ataatgcacg ccgatatctg caaaaccgcc tttaaattct gcatgagata
    42601 caacaggtat cgctaatata gaggaaagtg tcagagttaa aagatgtttt ttcatagcat
    42661 aattccctat gccgatcgtt attagtagat tgcttaataa agtggtttgc taaaaacgac
    42721 atattgttaa tgcaaaggaa ttaatatcgc caatacagtt tttaccgtgg attaatagag
    42781 aaaagatata aatccatcga tatcgaatcg ctattgaatg cgtgagaaaa gtgtattggt
    42841 aagagccggg acaacctcgc tataaaaagg cgttagattc caccctacag aaaaaggata
    42901 tgtatgtctc aggttcaatt ttctcataac ccgctgtttt gcatagatat tatcaagact
    42961 tataaacctg atttcacgcc acgagtggcc tttattttag gttccgggct cggcgcgctg
    43021 gccgatcaga ttgagaacgc tgtcgcaatt tcctacgaaa agctgccggg cttcccggta
    43081 agtacggtac atggtcatgc gggggagtta gtgctgggcc atctccaggg cgtaccggtg
    43141 gtatgtatga aaggtcgcgg acatttctac gaaggtcgtg gaatgaccat tatgactgac
    43201 gcaattcgta cctttaagct gctgggctgc gagctactgt tctgcaccaa tgcggcaggc
    43261 tcgctgcgtc cggaagtggg ggcaggcagc ctggtcgcat tgaaagatca tatcaacacc
    43321 atgcccggta cgccgatggt gggtcttaac gatgatcgtt ttggagagcg cttcttctca
    43381 ctggcaaatg cctacgatgc ggaataccgc gcactgttac aaaaagtggc gaaagaagag
    43441 ggtttccctc tgacggaggg cgtgttcgtc tcgtatccgg ggccgaattt cgagactgcg
    43501 gcggaaattc gcatgatgca aattattggt ggggatgttg ttggtatgtc tgtggtgcct
    43561 gaggttattt cagctcgcca ttgcgacctt aaagtcgttg cggtctctgc gattaccaat
    43621 atggcggaag gtttaagcga tgtgaaattg tcacatgcgc aaacgctggc ggctgcggag
    43681 ctctctaagc agaacttcat caaccttatt tgtggctttc tgcgcaaaat tgcctgagaa
    43741 aaacaataag aaacggcctc gcgggtgagg ccaaatgatg cgacaaggaa acgattatga
    43801 gcatcgcgat gcgcttaaag gtaatgtcct ttttgcaata ttttatctgg gggagctggc
    43861 tggttaccct cggctcttac atgattaata cccttcattt caccggcgct aatgttggca
    43921 tggtttacag ttccaaaggg atcgccgcga ttattatgcc tggtataatg gggatcatcg
    43981 cagacaaatg gctgcgcgca gaacgtgcat acatgctgtg tcacctggtg tgtgcgggcg
    44041 tactttttta tgcggcatcc gtaactgatc cggatatgat gttttgggtg atgttagtca
    44101 atgcgatggc gtttatgccg actattgcgt tatcgaacag cgtctcttat tcctgtcttg
    44161 cccaggcagg gcttgacccg gtgaccgctt tcccgcccat tcgcgttttt ggtacggtgg
    44221 ggttcattgt cgcgatgtgg gcagtaagcc tgctgcatct ggaattgagt agtctgcagc
    44281 tgtatatcgc gtccggtgcg tcattgctgc tgtcggctta tgcgctgact ttgccgaaga
    44341 ttccggttgc ggagaaaaaa gcgaccacat cgcttgccag caagctgggt ctggatgcct
    44401 tcgtgctgtt taaaaatcca cgcatggcca tctttttcct ctttgccatg atgctgggtg
    44461 cggtactgca aattaccaac gtttttggta atccgttcct acatgatttc gcccgtaacc
    44521 cggagtttgc tgacagtttt gtggtgaaat atccctccat tttactgtca gtttcacaga
    44581 tggcagaagt gggctttata ctgactatcc cattcttttt aaagcgattt ggcattaaag
    44641 ccgtcatgct gatgagtatg gtggcctgga cgctgcgctt tggcttcttc gcctatggcg
    44701 atccgtcaac aaccggattt attttgctgc tgctgtcgat gattgtttat ggctgtgcat
    44761 tcgatttctt caatatttct ggttcggtat ttgtcgaaca ggaagttgat tccagcattc
    44821 gtgccagcgc gcaggggctc tttatgacca tggtaaatgg tgtcggcgca tgggttggct
    44881 cgattctgag tggcatggca gtagattact tttcggtgga tggcgtaaaa gactggcaaa
    44941 ctatctggct ggtgtttgca ggatatgctc tttttctcgc agtgatattt ttctttgggt
    45001 ttaaatataa tcatgaccct gaaaagataa agcatcgagc ggtggctcat taaaaggatt
    45061 cgcagctctg ctcttcagag ctgcttttat gataaaggtt aattagtgaa agatatttta
    45121 ttttcttccg gcgttggttt tggcattggt gctttgttta caatcgtgcg cttgcctatt
    45181 cctgtaccaa atgtattacc aggtatatta
//
LOCUS       DAPGWB010000017        44431 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.017, whole genome shotgun sequence.
ACCESSION   DAPGWB010000017 DAPGWB010000000
VERSION     DAPGWB010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 44431)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44431)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44431
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.017"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(85..1449)
                     /gene="mnmE"
                     /locus_tag="RHX79_000973"
     CDS             complement(85..1449)
                     /gene="mnmE"
                     /locus_tag="RHX79_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDV2196178.1"
                     /translation="MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPR
                     YADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPG
                     LRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLV
                     EALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMK
                     VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE
                     ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVR
                     NKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRH
                     LQALEQAAEHLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSF
                     CIGK"
     gene            complement(1555..3201)
                     /gene="yidC"
                     /locus_tag="RHX79_000974"
     CDS             complement(1555..3201)
                     /gene="yidC"
                     /locus_tag="RHX79_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDV2196179.1"
                     /translation="MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAA
                     GSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLET
                     SPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNT
                     FTKTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTF
                     RGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYT
                     ANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLW
                     FISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQA
                     MRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAP
                     FALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLW
                     FPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS"
     gene            complement(3204..3461)
                     /gene="yidD"
                     /locus_tag="RHX79_000975"
     CDS             complement(3204..3461)
                     /gene="yidD"
                     /locus_tag="RHX79_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDV2196180.1"
                     /translation="MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEA
                     LRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH"
     gene            complement(3425..3784)
                     /gene="rnpA"
                     /locus_tag="RHX79_000976"
     CDS             complement(3425..3784)
                     /gene="rnpA"
                     /locus_tag="RHX79_000976"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014172301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDV2196181.1"
                     /translation="MVKLAFPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGH
                     PRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALS
                     EALEKLWRRHCRLARGS"
     gene            complement(3801..3941)
                     /gene="rpmH"
                     /locus_tag="RHX79_000977"
     CDS             complement(3801..3941)
                     /gene="rpmH"
                     /locus_tag="RHX79_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001686914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDV2196182.1"
                     /translation="MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTV
                     SK"
     gene            complement(4171..4251)
                     /locus_tag="RHX79_000978"
     CDS             complement(4171..4251)
                     /locus_tag="RHX79_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196183.1"
                     /translation="MTIDKNWLNRSNKDPGRSLRFTHQPV"
     gene            4548..5951
                     /gene="dnaA"
                     /locus_tag="RHX79_000979"
     CDS             4548..5951
                     /gene="dnaA"
                     /locus_tag="RHX79_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDV2196184.1"
                     /translation="MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPN
                     RFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVA
                     QTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADN
                     PGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNA
                     IEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEIN
                     GVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVR
                     ELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVA
                     DLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREE
                     SHDIKEDFSNLIRTLSS"
     gene            5956..7056
                     /gene="dnaN"
                     /locus_tag="RHX79_000980"
     CDS             5956..7056
                     /gene="dnaN"
                     /locus_tag="RHX79_000980"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006177590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDV2196185.1"
                     /translation="MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSL
                     TGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSG
                     RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
                     ETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQI
                     GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNE
                     KFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCE
                     NVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL"
     gene            7056..8129
                     /gene="recF"
                     /locus_tag="RHX79_000981"
     CDS             7056..8129
                     /gene="recF"
                     /locus_tag="RHX79_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HDV2196186.1"
                     /translation="MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIY
                     TLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDG
                     HKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQ
                     RNAALRQVTRYEQLRPWDKELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTF
                     SFQRGWEKETEYAEVLERNFERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKL
                     LMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISA
                     EHVIDMSDENSKMFTVEKGKITD"
     gene            8158..10572
                     /gene="gyrB"
                     /locus_tag="RHX79_000982"
     CDS             8158..10572
                     /gene="gyrB"
                     /locus_tag="RHX79_000982"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDV2196187.1"
                     /translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
                     DNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
                     KFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET
                     EKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY
                     EGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQR
                     DGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
                     QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT
                     RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
                     LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRT
                     LLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATL
                     HTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQ
                     TVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFI
                     TGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYK
                     GLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALK
                     AANIDI"
     gene            10812..11210
                     /locus_tag="RHX79_000983"
     CDS             10812..11210
                     /locus_tag="RHX79_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418153.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HDV2196188.1"
                     /translation="MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGL
                     GAILSTWLSNQQGNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIID
                     ALSPQGEVSPQANNDLLSAGMELLKGKLFR"
     gene            11325..12137
                     /gene="yidA"
                     /locus_tag="RHX79_000984"
     CDS             11325..12137
                     /gene="yidA"
                     /locus_tag="RHX79_000984"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HDV2196189.1"
                     /translation="MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTG
                     RPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSRE
                     VGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEP
                     AILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAI
                     GDQENDIAMIEYAGVGVAMDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLN"
     gene            complement(12183..12839)
                     /locus_tag="RHX79_000985"
     CDS             complement(12183..12839)
                     /locus_tag="RHX79_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196190.1"
                     /translation="MKLNLKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQ
                     SDTITGLSQAKDSNGTKGYVFVGESLDYLITDGADDIVKMLNDPALNRHNIQVADDAR
                     FVLNAGKKKFTGTISLYYYWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKN
                     MDYSKVMAFYHPFKVRFYEYYSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ
                     "
     gene            13117..13806
                     /gene="dgoR"
                     /locus_tag="RHX79_000986"
     CDS             13117..13806
                     /gene="dgoR"
                     /locus_tag="RHX79_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-galactonate utilization transcriptional
                     regulator DgoR"
                     /protein_id="HDV2196191.1"
                     /translation="MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNI
                     IREVFRSLMAKRLIEMKRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVR
                     NLVEPAIARWAAERATSSDLAQIESALNEMIANNQDREAFNEADIRYHEAVLQSVHNP
                     VLQQLSIAISSLQRAVFERTWMGDEANMPQTLQEHKALFDAIRHQDGDAAEQAALTMI
                     ASSTRRLKEIT"
     gene            13803..14681
                     /gene="dgoK"
                     /locus_tag="RHX79_000987"
     CDS             13803..14681
                     /gene="dgoK"
                     /locus_tag="RHX79_000987"
                     /EC_number="2.7.1.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxygalactonokinase"
                     /protein_id="HDV2196192.1"
                     /translation="MTARYIAIDWGSTNLRAWLYQGDHCLESRQSEAGVTRLNGKSPA
                     AVLAEVTTDWREENTPVVMAGMVGSNVGWKVAPYLSVPARFSSIGEQLTSVGDNIWII
                     PGLCVSHDDNHNVMRGEETQLIGARTLAPSSLYVMPGTHCKWVQADSQQINDFRTVMT
                     GELHHLLLNHSLIGAGLPPQENSADAFAAGLERGLNAPAILPQLFEVRASHVLGTLPR
                     EQVSEFLSGLLIGAEVASMRDYVTHQHAITLVAGTSLTARYQQAFQAMGCDVTAVAGD
                     TAFQAGIRSIAHAVAN"
     gene            14665..15282
                     /gene="dgoA"
                     /locus_tag="RHX79_000988"
     CDS             14665..15282
                     /gene="dgoA"
                     /locus_tag="RHX79_000988"
                     /EC_number="4.1.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-6-phosphogalactonate aldolase"
                     /protein_id="HDV2196193.1"
                     /translation="MQWQTKLPLIAILRGIKPDEALAHVGAVIDAGFDAVEIPLNSPQ
                     WEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGM
                     TVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVTPE
                     NLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAVQ"
     gene            15279..16427
                     /gene="dgoD"
                     /locus_tag="RHX79_000989"
     CDS             15279..16427
                     /gene="dgoD"
                     /locus_tag="RHX79_000989"
                     /EC_number="4.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020077623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactonate dehydratase"
                     /protein_id="HDV2196194.1"
                     /translation="MKITKITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAA
                     VHELGDYLIGQDPSRINDLWQVMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLNAPV
                     WQLMGGLVRDKIKAYSWVGGDRPADVIDGIKTLREIGFDTFKLNGCEELGLIDNSRAV
                     DAAVNTVAQIREAFGNQIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAE
                     YYPKLAAQTHIPLAAGERMFSRFDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAE
                     AYDVTLAPHCPLGPIALAACLHIDFVSYNAVLQEQSMGIHYNKGAELLDFVKNKEDFS
                     MVGGFFKPLTKPGLGVEIDEAKVIEFSKNAPDWRNPLWRHEDNSVAEW"
     gene            16502..17839
                     /locus_tag="RHX79_000990"
     CDS             16502..17839
                     /locus_tag="RHX79_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196195.1"
                     /translation="MVSGFAMPKIWRKLAMDIPVNAAKPGRRRYLTLVMIFITVVICY
                     VDRANLAVASAHIQEEFGITKAEMGYVFSAFAWLYTLCQIPGGWFLDRVGSRVTYFIA
                     IFGWSVATLFQGFATGLMSLIGLRAITGIFEAPAFPTNNRMVTSWFPEHERASAVGFY
                     TSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIGIIWSLIWFKVYQPPRLTKGISKA
                     ELDYIRDGGGLVDGDAPVKKEARQPLTAKDWKLVFHRKLIGVYLGQFAVASTLWFFLT
                     WFPNYLTQEKGITALKAGFMTTVPFLAAFVGVLLSGWVADLLVRKGFSLGFARKTPII
                     CGLLISTCIMGANYTNDPMMIMCLMALAFFGNGFASITWSLVSSLAPMRLIGLTGGVF
                     NFAGGLGGITVPLVVGYLAQGYGFAPALVYISAVALIGALSYILLVGDVKRVG"
     gene            complement(17836..18900)
                     /gene="cbrA"
                     /locus_tag="RHX79_000991"
     CDS             complement(17836..18900)
                     /gene="cbrA"
                     /locus_tag="RHX79_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418145.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin M resistance protein"
                     /protein_id="HDV2196196.1"
                     /translation="MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSK
                     PCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHA
                     FDLWMKSLIPTSVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSM
                     VRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNSITNCYSWSISKDGYFIFGGAY
                     PMKDGQTRFTTLKEKMSAFQFQFGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAG
                     FISASSLEGISYALDSADILRAVLLKQPEKLNTAYWRATRKLRLKLFGKIVKSRCLTA
                     PALRKWIMRSGMAHIPQLKD"
     gene            19001..20215
                     /locus_tag="RHX79_000992"
     CDS             19001..20215
                     /locus_tag="RHX79_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3748 domain-containing protein"
                     /protein_id="HDV2196197.1"
                     /translation="MKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIER
                     VNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIAE
                     GGKVSNLDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNV
                     GVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAF
                     IGDTLSPKGEKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTH
                     HRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQ
                     SAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWM
                     EGGQLWITETDR"
     gene            complement(20217..20549)
                     /locus_tag="RHX79_000993"
     CDS             complement(20217..20549)
                     /locus_tag="RHX79_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418143.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HDV2196198.1"
                     /translation="MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATM
                     IGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSSVRSRVEKSEANAQATNAVI
                     PPARMPDN"
     misc_feature    20789..20861
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01832"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ROSE (Repression Of Heat Shock gene Expression)
                     occurs in the 5'-region of heat shock genes and acts as an
                     RNA thermometer to modulate expression; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF01832"
     gene            20855..21268
                     /gene="ibpA"
                     /locus_tag="RHX79_000994"
     CDS             20855..21268
                     /gene="ibpA"
                     /locus_tag="RHX79_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpA"
                     /protein_id="HDV2196199.1"
                     /translation="MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDE
                     NHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA
                     ENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEIN"
     gene            21380..21808
                     /gene="ibpB"
                     /locus_tag="RHX79_000995"
     CDS             21380..21808
                     /gene="ibpB"
                     /locus_tag="RHX79_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709512.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpB"
                     /protein_id="HDV2196200.1"
                     /translation="MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNH
                     YRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAEN
                     MEVSGATFVNGLLHIDLIRNEPEPIAAQRIAISERPALNS"
     gene            22005..23666
                     /locus_tag="RHX79_000996"
     CDS             22005..23666
                     /locus_tag="RHX79_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDV2196201.1"
                     /translation="MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVG
                     HFVSQAGMTLSSDMLHVIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVI
                     IGGLVTAILHKLFDIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSY
                     AMAYPFGICGILFTMWMLRVIFRVNVETEAQQHESSRTNGGALIKTINIRVENPNLHD
                     LAIKDVPILNGDKIICSRLKREETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQ
                     EVDTSLSTKGTDLRVERVVVTNENVLGKRIRDLHFKERYDVVISRLNRAGVELVASGD
                     ISLQFGDILNLVGRPSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVP
                     GFPAALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKS
                     GGDFVNTLVNGEGLSWIGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPP
                     ALAFANNLHPTSGAAALSYATVYPLVMFLRIITPQLLAVLFWSIG"
     gene            complement(23663..24379)
                     /locus_tag="RHX79_000997"
     CDS             complement(23663..24379)
                     /locus_tag="RHX79_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDV2196202.1"
                     /translation="MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRK
                     AIDLLVAWGLVVRRHGSGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMP
                     APPAIASQLRIQINEQIYFSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKFEY
                     IEQECGILIGGNYESLTPVLADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMF
                     RNASEYQVEYHLRRLHPEKS"
     gene            24675..26291
                     /locus_tag="RHX79_000998"
     CDS             24675..26291
                     /locus_tag="RHX79_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312650.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDV2196203.1"
                     /translation="MLSQIQRFGGAMFTPVLLFPFAGIVAGLAILLQNPMFVGESLTD
                     PNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFI
                     NAMGMTWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDK
                     KLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWV
                     YTFLERILIPTGLHHFIYGQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGG
                     FALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFI
                     SPLLFAVHAVLAASMSTVMYLFGVVGNMGGGLIDQVLPQNWIPMFSNHADMMLTQIAI
                     GLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQA
                     AGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVII
                     GLHVSQLREQLDSLINSHQSAENVAITEAV"
     gene            26291..27105
                     /locus_tag="RHX79_000999"
                     /pseudo
     CDS             26291..27105
                     /locus_tag="RHX79_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312649.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(27102..27995)
                     /locus_tag="RHX79_001000"
     CDS             complement(27102..27995)
                     /locus_tag="RHX79_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418136.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDV2196204.1"
                     /translation="MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEH
                     YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC
                     EGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA
                     FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR
                     RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG
                     YAPSAVLKNTDQHPTDASPHN"
     gene            28162..29877
                     /locus_tag="RHX79_001001"
     CDS             28162..29877
                     /locus_tag="RHX79_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="solute:sodium symporter family transporter"
                     /protein_id="HDV2196205.1"
                     /translation="MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKA
                     PVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGI
                     ATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
                     AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFM
                     QGIEQLTTVHAEKLNSIGGPTDPLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLA
                     EGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTLVNNVLPVPMVGFFG
                     AVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLV
                     APWIANAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITI
                     NYLVKFDFHFLYVLACTFCINVVVMLVIGFIKPRATPFTFKDAFAVDMKPWRNVKIAS
                     IGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPAVTFTPD
                     AKDSL"
     gene            29874..31367
                     /locus_tag="RHX79_001002"
     CDS             29874..31367
                     /locus_tag="RHX79_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDV2196206.1"
                     /translation="MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNS
                     AYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWH
                     LDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETF
                     TWAHRISNRAVDFLQQPARAEEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYDLGEKA
                     QDDLANKPEHHRLWAQAMPSPVGDDGLYHHPLYFACNDFVDDQIGRVINALTPEQREN
                     TWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPT
                     MMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLV
                     LNLFTSDELYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLR
                     PWRKDALPRWMGAFRPRPQDGYSPVVRDYDTGLPTQGVKVEEKKQKF"
     gene            complement(31414..31863)
                     /locus_tag="RHX79_001003"
     CDS             complement(31414..31863)
                     /locus_tag="RHX79_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196207.1"
                     /translation="MGIIAQNKISSLGMLFGAIALMMGIIHFSFGPFSAPPPTFESIV
                     ADKTAEIKRGLLAGIKGEKITTVEKKEDVDVDKILDQSGIALAIAALLCAFIGGMRKE
                     NRWGIRGALVFGGGTLAFHTLLFGIGIVCSILLIFLIFSFLTGGSLV"
     gene            31973..32320
                     /locus_tag="RHX79_001004"
     CDS             31973..32320
                     /locus_tag="RHX79_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidH family protein"
                     /protein_id="HDV2196208.1"
                     /translation="MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAP
                     DFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMV
                     VAVIVMGLVLYAG"
     gene            32310..32672
                     /locus_tag="RHX79_001005"
     CDS             32310..32672
                     /locus_tag="RHX79_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HDV2196209.1"
                     /translation="MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWH
                     QAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAI
                     LFAVTHIHQLIVFIERVA"
     gene            32669..33166
                     /locus_tag="RHX79_001006"
     CDS             32669..33166
                     /locus_tag="RHX79_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDV2196210.1"
                     /translation="MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRAVQLI
                     PYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADISRISIELFDATLQKWCGSENP
                     QPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPYMRVMRDLIKQHRSPMEL
                     MTMLR"
     gene            complement(33174..34358)
                     /gene="emrD"
                     /locus_tag="RHX79_001007"
     CDS             complement(33174..34358)
                     /gene="emrD"
                     /locus_tag="RHX79_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418129.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter EmrD"
                     /protein_id="HDV2196211.1"
                     /translation="MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGA
                     VQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAA
                     SAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWN
                     WRACYLFLLVLCAGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIG
                     GLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ
                     SVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGT
                     AGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPLATRMSHQGQ
                     PV"
     gene            complement(34777..34866)
                     /gene="tisB"
                     /locus_tag="RHX79_001008"
     CDS             complement(34777..34866)
                     /gene="tisB"
                     /locus_tag="RHX79_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin TisB"
                     /protein_id="HDV2196212.1"
                     /translation="MSLVDIAILILKLIVAALQLLDAVLKYLK"
     gene            35431..35529
                     /gene="ivbL"
                     /locus_tag="RHX79_001009"
     CDS             35431..35529
                     /gene="ivbL"
                     /locus_tag="RHX79_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilvB operon leader peptide IvbL"
                     /protein_id="HDV2196213.1"
                     /translation="MTTSMFNAKLLPTALSAAVVVVRVVVVVGNAP"
     gene            35635..37323
                     /gene="ilvB"
                     /locus_tag="RHX79_001010"
     CDS             35635..37323
                     /gene="ilvB"
                     /locus_tag="RHX79_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HDV2196214.1"
                     /translation="MASSGTTSTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYD
                     ALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDS
                     IPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQS
                     GRPGPVWIDIPKDVQTAVFEIETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYL
                     GGGVINAPARVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEA
                     DLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQL
                     IPQVEAQPRAEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVG
                     QHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMN
                     IQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQGVFAATYPGKINFMQIAAGFG
                     LETCDLNNEADPQAALQEIINRPGPALIHVRIDAEEKVYPMVPPGAANTEMVGE"
     gene            37327..37617
                     /gene="ilvN"
                     /locus_tag="RHX79_001011"
     CDS             37327..37617
                     /gene="ilvN"
                     /locus_tag="RHX79_001011"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDV2196215.1"
                     /translation="MQNTTHDNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPI
                     QDSDKSHIWLLVNDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ"
     gene            37692..38282
                     /gene="uhpA"
                     /locus_tag="RHX79_001012"
     CDS             37692..38282
                     /gene="uhpA"
                     /locus_tag="RHX79_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator UhpA"
                     /protein_id="HDV2196216.1"
                     /translation="MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP
                     GRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKR
                     CSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
                     ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW"
     gene            38282..39784
                     /gene="uhpB"
                     /locus_tag="RHX79_001013"
     CDS             38282..39784
                     /gene="uhpB"
                     /locus_tag="RHX79_001013"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction histidine-protein
                     kinase/phosphatase UhpB"
                     /protein_id="HDV2196217.1"
                     /translation="MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFP
                     FGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISR
                     YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH
                     YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP
                     IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRL
                     RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA
                     ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLSLEQAIRSLMREMELEGRG
                     IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE
                     DDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV"
     gene            39794..41113
                     /gene="uhpC"
                     /locus_tag="RHX79_001014"
     CDS             39794..41113
                     /gene="uhpC"
                     /locus_tag="RHX79_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418123.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter family glucose-6-phosphate
                     receptor UhpC"
                     /protein_id="HDV2196218.1"
                     /translation="MLPFLKAPADAPLMTDKHEIDARYRYWRRHILLTIWLGYALFYF
                     TRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL
                     IATGIINILFGFSTSLWAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWN
                     TAHNVGGALIPIVMAAAALHYGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVG
                     EWRHDALEIAQQQEGAGLTRKEILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLY
                     MSETLGVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG
                     SLWLMPFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG
                     ASLAGWPLAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQAPREA"
     gene            41251..42642
                     /gene="uhpT"
                     /locus_tag="RHX79_001015"
     CDS             41251..42642
                     /gene="uhpT"
                     /locus_tag="RHX79_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HDV2196219.1"
                     /translation="MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYL
                     IRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFML
                     ILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF
                     LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPE
                     SYGLGKAEELFGEEISEEDKETESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRI
                     GIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSDLANGRRGLVACIAL
                     ALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKG
                     TFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERK
                     IRREKKIQQLTVA"
     gene            complement(42687..>44431)
                     /gene="adeD"
                     /locus_tag="RHX79_001016"
     CDS             complement(42687..>44431)
                     /gene="adeD"
                     /locus_tag="RHX79_001016"
                     /EC_number="3.5.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HDV2196220.1"
                     /translation="FHHISRAEYQELLAVSRGDAVADYIIDNVSILDLINGGEISGPI
                     VIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHIESSMMTPVTFETATLPR
                     GLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTL
                     EQMLAWRDHPQVTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGLGGKELNAY
                     ITAGIENCHESYQLEEGRRKLQLGMSLMIREGSAARNLNALAPLINEFNSPQCMLCTD
                     DRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGLLAPGKQAD
                     IVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQSAPPYGNTIARQPVSASDFAL
                     QFTPGKRYRVIDVIHNELITHSHSSVYSENGFDRDDVSFIAVLERYGQRLAPACGLLG
                     GFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVNQVIQDGGGLCVVRNGQVQSHLPL
                     PIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLSLPVIPALKLTSQGLF
                     DGEKFAFTTLEVTE"
BASE COUNT        10214 a        11440 c        12088 g        10689 t
ORIGIN      
        1 aaaaaaaggg ttgaggaata acaggagtgc taacaatgaa gcgaagccgc atctgacagt
       61 cagaatacgg cttcgtaagc gcggttactt accaatacag aagctggaga aaatccgccc
      121 cagcaggtcg tctgaagtaa attccccggt gatttcgctt aagttctgct gtgccagacg
      181 caactcttcc gccagcagtt cacctgccca ggctcccaac agttgcgctt tgccctgttg
      241 tagatgttcc gctgcctgtt ccagcgcctg taggtggcga cgacgcgcca ggaagccgcc
      301 ttccatgttg gtgtcaaagc ccatgctctg tttgagatgg ttacgcagca cgtccacgcc
      361 ttcaccagtc cttgccgaga gacgaattaa cgcgtgaccg ttcacttcac tcattcccag
      421 cgtttcgccg gtgatatcgg ctttattgcg caccacggtg atcggcagtt tcgctggcag
      481 acgggcaata aattccggcc agatctctgc cggatccacg gcgtctgttg tggtgccatc
      541 gaccataaac agcacgcggt cggcctgttc aatttcctgc cacgcgcgct cgataccaat
      601 acgttccact tcgtcactgg cttcacgtag cccagcggta tcgatgatat gcagcggcat
      661 tccgtcaatg tggatatgct cacgcagcac gtcacgtgtg gttccggcga tatcagttac
      721 gattgctgct tcacggcccg ccagcgcgtt taacaggctc gatttaccgg cgttaggacg
      781 tccggcaatc accaccttca tcccttcgcg caacaaacta ccctgacgtg cttcagcacg
      841 cactgcatcg agatcggcaa tcacgtcatt aagctgggct tcaattttgc cgtcggagag
      901 gaaatcgatc tcttcatcag ggaaatcaat tgccgcttcg acgtaaatgc gcaagtgggt
      961 gagggcttcc accagatggt tgacccgtgc ggagaatgcg ccttgcagcg agttaagtgc
     1021 cgaacgggcc gcctgttccg aactggcgtc gataagatcg gcaatcgcct cggcctgggc
     1081 taagtcgagt ttatcgttaa gaaacgcgcg ttcggaaaac tcaccagggc gagcaatccg
     1141 caggccggga atggtcagaa tgcgttttaa cagcaggtcg aggatcaccg gaccgccatg
     1201 accttgcagt tccagcacat cttcgccggt gaacgagttc gggccaggga accatagcgc
     1261 aatcccctga tcgagcacgc tgccgtcggc gtctttaaac ggaagataat cggcgtagcg
     1321 cggcttaggt agtttaccca gcacggtttc ggcaacttca cgggctttga agccggagat
     1381 gcgcaggatg ccaacgccgc cacgtcccgg aggcgtggcc tgggctacga tagtgtcatt
     1441 atcgctcatg atgttcctgt tgctttgtgt ggcggatgcg cggtgcttat ccgccctacg
     1501 aaaagaaaaa aggcggtcaa ctgaccgccc ttattttagc gaaaactcac cgaatcagga
     1561 ttttttcttc tcgcggctat gcaggccacg tttttccaga ccacggtaaa tcagctgctg
     1621 ctgaataatg gttaccaggt tgctgacgat atagtacagc accagacctg acgggaacca
     1681 caggaagaac acggtgaaga tgaccggcat aaaggtcatg atcttctgct gcatcgggtc
     1741 ggtcactgtg gtcggcgaca tcttctgaat gaagaacatc gttacgccca tcaggatcgg
     1801 caagatgtag tacgggtcct gtgccgacag gtcgtggatc cacagtgcaa acggtgcctg
     1861 acgcagttca acggaaccca tcagcatgta gtacaacgcc aggaagattg gcatctggat
     1921 cagcagcggg aagcagccgc ccagcgggtt aaccttctca gctttgtaca gcgccatcat
     1981 ttcctggctg atacgctgtt tgtcatcgcc cagacgctca cgcattgcct gaatcttcgg
     2041 ctgcagcata cgcatcttcg ccatggaggt gtactgcgct ttggtcagcg ggtacatgat
     2101 gccacgaacg ataaaggtga tgatgataat ggagaagccc cagttaccca caaagctatg
     2161 gatccatttc agcagtttga acagcggctg agagatgaac cacaaccaac cgtaatcaac
     2221 ggtcagatcc aggtgcggag caacagctgc cattttgtcc tggatttccg ggccaaccca
     2281 cagggtgctg ttcatcgcgc cagtctgacc aggctgaacc agtaccggct gagatttata
     2341 gccgatagcg gcgatgccgt tacccagatt agcggtatag aagttgttgg taccgtcgtt
     2401 atgcgggatc cacgccgtcg cgaaatactg ttgcagcatc gccacccaac cacctttcga
     2461 agagatgttc aggttttcgt tatcggcaat ggtatcgaac ttgtatttct cgtacttctc
     2521 gtcaggcgtg gagtacgccg cgccgcggaa ggtgtgcagt gcgaagttgc tgcttccggt
     2581 atcgagatgc ggtggcagag tgatggattg cttcaactga ccaaaggtgg agatttccag
     2641 cggtttctcg ccagcgttct gcacgttgta gttgacgttg acagcgtaat caccacgttt
     2701 caggacaaac gttttggtaa acgtgttgcc tgccgcgtcg gtatacgtca tcggcacctg
     2761 cagttcgttt tgaccttcag ccagcacata agcgtctttt tcaacgttat acagcggacg
     2821 cgggccgtta gccgggttat ccgggccatc acgaccggtc agaccgctct gtgcctgata
     2881 aataaactgc ggtgaagttt ccagcagctg gaacggctgg gtagagttca gctctttcgg
     2941 gtaagcaggc agcagagctt gctcaacatc accaccacgg gtgttgatgg tcagatcaag
     3001 cacgtcggtc ttaaccgaga tcagtttccc ctggccactg gccggtacgc cctggtcggc
     3061 ggcgctaccc gctgcggtgg tcgttgtctg cgtggtctgt tgggcctgag gttgcgggtt
     3121 tttatcctgc tcccaggctt gccagatcat gaaagacacg aacagcaaag cgatgactaa
     3181 aagattgcgt tgcgaatcca tcgttagtgt tctctggtat caaatggtcc gggcgggacg
     3241 ggatcgtcac caccagggtg taaagggtgg cattttaata cgcgtttcac cgtcaaccaa
     3301 ctgcctttta tcactccaaa cctgcgcaat gcctcaattc cgtagcttga acaggttgga
     3361 gtgaaacgac aatgcggccc gagtagcgga ctaatcaggc gttgatagac ccgaatgagg
     3421 gctatcagga cccgcgagcc aggcgacagt ggcggcgcca taatttttcc aacgcttccg
     3481 agagagcacg gttatcgagg tcggcaaccc cttttttcgc caccaccacg aaatccatag
     3541 ccgggagttc atgttggcgc agacggaagc tttcacgcgt cagacgttta atccgattgc
     3601 gttcatgggc gcgtcgaacg tttttcttgg cgactgtaag accgatacgg ggatgcccca
     3661 gcgaattcag gcggccgaga atggtaattt gcggcgtgcc agcccgttgt ggctgctgga
     3721 agacgaatgt gaattgactg ggagttaaca agcgtaactc cctgggaaat gcgagcttaa
     3781 ccactcaggg gttagcttta ttacttagaa acggtcagac gagcgcggcc tttagcacga
     3841 cgacgtgcca gaacctgacg accattttta gtagccatac gagcacggaa gccgtgagaa
     3901 cggttgcgct tcagtacaga cggttgaaaa gtgcgtttca tggcgatttc tacctaaact
     3961 tgaataaatt caatggcttt attggatatc cgccgaaaaa tgaaacgatg gacaccgaag
     4021 ccatgggtga ttaaagaggc cggattgtaa taattgtaca ctccggagtc aattctcttt
     4081 ccttatttac cgcgcttttc cgcacctttt cgcagggaaa atgtacgacc tcacaccagt
     4141 ggaaaccagc atggcgcgcc gggtggagga ttatacgggc tgatgggtaa agcgcaagga
     4201 tcgtcctgga tctttattag atcgattaag ccaatttttg tctatggtca ttaaattttc
     4261 caatatgcgg cgtaaatcgt gcccgcctcg cggcaggatc gtttacactt agcgagttct
     4321 ggaaagtcct gtggataaat cgggaaaatc tgtgagaaac agaagatctc ttgcgcagtt
     4381 taggctatga tccgcggtcc cgatcgtttt gcaggatctt gatcgggcat ataaccgcag
     4441 acagcggttc gtgcgtcacc ctcaagcagg gtcttttcga cgtacgtcaa caatcatgaa
     4501 tgtttcagcc ttagtcatta tcgacttttg ttcgagtgga gtccgccgtg tcactttcgc
     4561 tttggcagca gtgtcttgcc cgattgcagg atgagttacc agccacagaa ttcagtatgt
     4621 ggatacgccc attgcaggcg gaactgagcg ataacacgct ggccctgtac gcgccaaacc
     4681 gttttgtcct cgattgggta cgggacaagt accttaataa tatcaatgga ctgctaacca
     4741 gtttctgcgg agcggatgcc ccacagctgc gttttgaagt cggcaccaaa ccggtgacgc
     4801 aaacgccaca agcggcagtg acgagcaacg tcgcggcccc tgcacaggtg gcgcaaacgc
     4861 agccgcaacg tgctgcgcct tctacgcgct caggttggga taacgtcccg gccccggcag
     4921 aaccgaccta tcgttctaac gtaaacgtca aacacacgtt tgataacttc gtcgaaggta
     4981 aatctaacca actggcgcgc gcggcggctc gccaggtggc agataaccct ggcggtgcct
     5041 ataacccgtt gttcctttat ggcggcacgg gtctgggtaa aactcacctg ctgcatgcgg
     5101 tgggtaacgg cattatggcg cgcaagccga atgccaaagt ggtttatatg cactccgagc
     5161 gctttgttca ggacatggtt aaagccctgc aaaacaacgc gatcgaagag tttaaacgct
     5221 actaccgttc cgtagatgca ctgctgatcg acgatattca gttttttgct aataaagaac
     5281 gatctcagga agagtttttc cataccttca acgccctgct ggaaggtaat caacagatca
     5341 ttctcacctc ggatcgctat ccgaaagaga tcaacggcgt tgaggatcgt ttgaaatccc
     5401 gcttcggttg gggactgact gtggcgatcg aaccgccaga gctggaaacc cgtgtggcga
     5461 tcctgatgaa aaaggccgac gaaaacgaca ttcgtttgcc gggtgaagtg gcgttcttta
     5521 tcgccaagcg tctacgatct aacgtacgtg agctggaagg ggcgctgaac cgcgtcattg
     5581 ccaacgccaa ctttaccgga agggcgatca ccatcgactt cgtgcgtgag gcgctgcgcg
     5641 acttgctggc attgcaggaa aaactggtca ccatcgacaa tattcagaag acggtggcgg
     5701 agtactacaa gatcaaagtt gcggatctcc tttccaagcg tcgatcccgc tcggtggcgc
     5761 gtccgcgcca gatggcgatg gcgctggcga aagagctgac taaccacagt ctgccggaga
     5821 ttggcgatgc gtttggtggt cgtgaccaca cgacggtgct tcatgcctgc cgtaagatcg
     5881 agcagttgcg tgaagagagc cacgatatca aagaagattt ttcaaattta atcagaacat
     5941 tgtcatcgta aacctatgaa atttaccgta gaacgtgagc atttattaaa accgctacaa
     6001 caggtgagcg gtccgttagg tggtcgtcct acgctaccga ttctcggtaa tctgctgtta
     6061 caggttgctg acggtacgtt gtcgctgacc ggtactgatc tcgagatgga aatggtggca
     6121 cgtgttgcgc tggttcagcc acacgagcca ggagcgacga ccgttccggc gcgcaaattc
     6181 tttgatatct gccgtggtct gcctgaaggc gcggaaattg ccgtgcagct ggaaggtgaa
     6241 cggatgctgg tgcgctccgg gcgtagccgt ttttcgctgt ctaccctgcc agcggcggat
     6301 ttcccgaacc tcgatgactg gcagagcgaa gtcgaattta ccctgccgca ggcgacgatg
     6361 aagcgtctga ttgaagcgac ccagttttct atggcgcatc aggacgttcg ctattactta
     6421 aacggtatgc tgtttgaaac cgaaggtgaa gaactgcgca ccgtggcaac cgacggccac
     6481 cgtctggcgg tctgttcaat gccaattggt caatctttgc caagccattc ggtgatcgtg
     6541 ccgcgtaaag gcgtgattga actgatgcgt atgctcgacg gcggcgacaa tccgctgcgc
     6601 gtacagattg gcagcaacaa cattcgcgcc cacgttggcg actttatctt cacctccaaa
     6661 ctggtggatg gtcgcttccc ggattatcgc cgcgttctgc cgaagaaccc ggacaaacat
     6721 ctggaagctg gctgcgatct gctcaagcag gcgtttgctc gcgcggcgat tctctctaac
     6781 gagaaattcc gcggcgtacg tctttatgtc agcgaaaacc agctgaaaat caccgccaac
     6841 aacccggaac aggaagaagc ggaagagatc ctcgacgtta cctatagcgg tgcggagatg
     6901 gaaatcggct tcaacgtcag ctatgtgctg gatgttctga acgcgctgaa atgcgaaaac
     6961 gtccgcatga tgctgaccga ttcggtttcc agcgtgcaga ttgaagatgc cgcatcacag
     7021 tcggctgcct atgttgtcat gccaatgaga ctgtaatgtc cctcacccgc ttgttgatcc
     7081 gcgatttccg caacattgaa accgcggatc tcgctttatc tcccggcttt aactttctgg
     7141 taggtgccaa cggcagtggc aaaaccagcg tgctggaagc catctatacg ctcggccatg
     7201 gtcgggcgtt tcgcagtttg cagattggtc gcgtcattcg ccatgagcag gaggcatttg
     7261 ttctccatgg gcgattacag ggcgaagagc gcgagacggc gattggctta accaaggaca
     7321 aacagggcga cagcaaagtc cgcatcgacg gtactgacgg gcataaagtc gcggaactgg
     7381 cgcacctgat gccaatgcag ctgataacgc cagaagggtt tactttactc aacggcggcc
     7441 ccaaatacag aagagcattc ctcgactggg gatgctttca caacgaaccc ggatttttca
     7501 ccgcctggag caatctcaag cgattgctca agcagcgcaa tgcggcgctg cgccaggtga
     7561 cacgttacga acagctacgc ccgtgggata aagaactgat cccgctggcg gagcaaatca
     7621 gcacctggcg cgcggagtat agcgccggta tcgcggccga tatggccgat acctgtaagc
     7681 aatttctccc tgagttttct ctgactttct ctttccagcg cggctgggag aaagagacag
     7741 aatatgctga ggtgctggaa cgtaattttg aacgcgatcg ccagctaacc tacaccgcgc
     7801 atggcccgca taaagcggac ttacgcattc gcgccgacgg tgcgccggtg gaagatacct
     7861 tatcgcgtgg gcagcttaag ctgttgatgt gcgccttacg tctggcgcaa ggagagttcc
     7921 tcacccgtga aagcgggcgg cggtgtctct acctgataga tgattttgcc tctgagcttg
     7981 atgatgagcg tcgcgggctg cttgccagcc gcttaaaagc gacgcaatca caggtctttg
     8041 tcagcgcgat cagtgctgaa cacgttatag acatgtcgga cgaaaattcg aagatgttta
     8101 ccgtggaaaa gggtaaaata acggattaac ccaagtataa atgagcgaga aacgttgatg
     8161 tcgaattctt atgactcctc cagtatcaaa gtcctgaaag ggctggatgc ggtgcgtaag
     8221 cgcccgggta tgtatatcgg cgacacggat gacggcaccg gtctgcacca catggtattc
     8281 gaggtggtag ataacgctat cgacgaagcg ctcgcgggtc actgtaaaga aattatcgtc
     8341 accattcacg ccgataactc tgtctctgta caggatgacg ggcgcggcat tccgaccggt
     8401 attcacccgg aagagggcgt atcggcggcg gaagtgatca tgaccgttct gcacgcaggc
     8461 ggtaaatttg acgataactc ctataaagtg tccggcggtc tgcacggcgt tggtgtttcg
     8521 gtagtaaacg ccctgtcgca aaaactggag ctggttatcc agcgcgaggg taaaattcac
     8581 cgtcagatct acgaacacgg tgtaccgcag gctccgctgg cggttaccgg cgagactgaa
     8641 aaaaccggca ccatggtgcg tttctggccc agcctcgaaa ccttcaccaa tgtgaccgag
     8701 ttcgaatatg aaattctggc gaaacgtctg cgtgagttgt cgttcctcaa ctccggcgtt
     8761 tccattcgtc tgcgcgacaa gcgcgacggc aaagaagacc acttccacta tgaaggcggc
     8821 atcaaggcgt tcgttgaata tctgaacaag aacaaaacgc cgatccaccc gaatatcttc
     8881 tacttctcca ctgaaaaaga cggtattggc gtcgaagtgg cgttgcagtg gaacgatggc
     8941 ttccaggaaa acatctactg ctttaccaac aacattccgc agcgtgacgg cggtactcac
     9001 ctggcaggct tccgtgcggc gatgacccgt accctgaacg cctacatgga caaagaaggc
     9061 tacagcaaaa aagccaaagt tagcgccacc ggtgacgatg cgcgtgaagg cctgattgcg
     9121 gtcgtttccg tgaaagtgcc ggacccgaaa ttctcctccc agaccaaaga caaactggtt
     9181 tcttctgagg tgaaatcagc ggttgaacag cagatgaacg aactgctggc agaatacctg
     9241 ctggaaaacc caaccgacgc gaaaatcgtg gttggcaaaa ttatcgatgc tgcccgtgcc
     9301 cgtgaagcgg cgcgtcgcgc gcgtgaaatg acccgccgta aaggtgcgct cgacttagcg
     9361 ggcctgccgg gcaaactggc agactgccag gaacgcgatc cggcgctttc cgaactgtac
     9421 ctggtggaag gggactccgc gggcggctct gcgaagcagg ggcgtaaccg caagaaccag
     9481 gcgattctgc cgctgaaggg taaaatcctc aacgtcgaga aagcgcgctt cgataagatg
     9541 ctctcttctc aggaagtggc gacgcttatc accgcgcttg gctgtggtat cggtcgtgac
     9601 gagtacaacc cggacaaact gcgttatcac agcatcatca tcatgaccga tgcggacgtc
     9661 gacggctcgc acattcgtac gctgctgttg accttcttct atcgtcagat gccggaaatc
     9721 gttgaacgcg gtcacgtcta catcgctcag ccgccgctgt acaaagtgaa gaaaggcaag
     9781 caggaacagt acattaaaga cgacgaagcg atggatcagt accagatctc tatcgcgctg
     9841 gatggcgcaa cgctgcacac caacgccagc gcaccggcat tggctggcga agcgttagag
     9901 aaattggtgt ctgagtacaa cgcgacgcag aaaatgatca accgcatgga gcgtcgttat
     9961 ccgaaagcaa tgctgaaaga gcttatctat cagccgacgc tgacggaagc cgacctctct
    10021 gatgagcaga ccgttacccg ctgggtgaac gcgctggtca gcgaactgaa cgacaaagaa
    10081 cagcacggca gccagtggaa gtttgatgtc cacaccaatg ccgaacaaaa cctgtttgaa
    10141 ccgattgttc gcgtgcgtac ccacggtgtg gatactgact atccgctgga tcacgagttt
    10201 atcaccggtg gcgaatatcg tcgtatctgc acgctgggtg agaaactgcg tggcttgctg
    10261 gaagaagatg cgtttatcga acgtggcgag cgtcgtcagc cggtagccag cttcgagcag
    10321 gcgctggact ggctggtgaa agagtcccgt cgcggcctct ccatccagcg ttataaaggt
    10381 ctgggcgaga tgaacccgga acagctgtgg gaaaccacca tggacccgga aagccgtcgt
    10441 atgctgcgcg ttaccgttaa agatgcgatt gctgccgacc agttgttcac cacgctgatg
    10501 ggcgacgccg ttgaaccgcg ccgtgcgttt attgaagaga acgccctgaa agcggcgaat
    10561 atcgatattt aatggcgcta accatgcgag cgtgcctgat gcgctacgct tatcaggcct
    10621 acgaaaatct tgcaatgtat tgaattttca tgattttgta ggccggataa ggcgttcacg
    10681 ccgcatccgg caagaagcta taagaaaagg gcggagatca tctccgccct ttttatttct
    10741 gcaatccgca attatcatcc cgcaaatcta tactttttgg gtcaacacgt aacgctttac
    10801 aggtgattat catggggctt tttgatgaag ttgtcggtgc ctttctgaaa ggcgatgcgg
    10861 ggaaatatca ggctatttta agttgggttg aggagcaggg cggcattcag gtgctgctgg
    10921 aaaaactgca aagtggcggc ttaggggcca ttctctcaac ctggctgagt aatcaacagg
    10981 gcaatcaatc ggttagtggc gagcaactgg aatcggcgct cggcacaaat gcggtgtccg
    11041 atctcgggca aaaacttggc gtggatacca gtacagcttc cagtttactg gcagagcaat
    11101 tgccgaagat tattgatgcg ctctcaccgc aaggtgaagt gtcaccacaa gccaataacg
    11161 atctgctttc cgcaggtatg gaactgctga aagggaaact cttccgctaa gcaaatgggg
    11221 agcatgcaac ccgcgttgca tccccctttt ccctcgggtg ttgtactgat ttttgagcgg
    11281 aatcgcgtta gcatgggtca ggaaccaatc tacctgggga actcatggct atcaaactca
    11341 ttgctatcga tatggatggc acccttctgc tgcccgatca caccatttca cccgccgtta
    11401 aaaatgcgat tgccgcagct cgcgcccgtg gcgtgaatgt cgtgctaacg acgggtcgcc
    11461 cttatgcagg cgttcacaac tacctgaaag agctgcatat ggaacagccg ggcgactact
    11521 gcattactta taacggcgcg ttggtacaga aggccgccga tggtagcacc gtggcgcaaa
    11581 ccgctctcag ctatgacgac taccgtttcc tggaaaaact ctctcgcgaa gtcggttctc
    11641 atttccacgc cctggaccgc accacgctgt atacagcaaa tcgcgatatc agctactaca
    11701 cggtgcatga atccttcgtt gccaccattc cgctggtgtt ctgcgaagcg gagaaaatgg
    11761 accccaatac ccagttcctg aaagtgatga tgattgatga acccgccatc ctcgaccagg
    11821 ctattgcgcg tattccgcag gaagtgaaag agaaatatac cgtgctgaaa agtgcgccgt
    11881 acttcctcga aatcctcgat aaacgcgtta acaagggtac gggtgtgaaa tcactggccg
    11941 acgtgttagg tattaaaccg gaagaaatca tggcgattgg cgatcaggaa aacgacatcg
    12001 caatgattga atatgcaggc gtcggtgtgg cgatggataa cgctattcct tcggtgaaag
    12061 aagtggcgaa ctttgtcacc aaatccaacc ttgaagatgg cgtggcgttt gctattgaga
    12121 agtatgtgct gaattaatca gtggacgggc aaacagcata aacgcgtttg cccgcttact
    12181 gattattggt ttactgcata tacaaccaga aattgcagcg gtgcagtaat gatgtccagc
    12241 gtaacagtca ctggcagtaa tgctgcggaa acaccatccg gaatgcctct gggtgaatag
    12301 tattcataaa atcgcacttt aaatggatgg tagaacgcca tcacctttga gtaatccatg
    12361 tttttatttt tctcatggat tgtgcctttt aggttttcca gtgacctggt acagtgttga
    12421 acaccacagg caaaaccata atgcgttgcc agtgcctttt cttcttcgtt attccagtag
    12481 tagtaaagcg atattgtgcc ggtaaatttc tttttccccg catttaaaac aaatcttgcg
    12541 tcatcggcaa cctgaatatt gtgccggtta agtgctggat cattgagcat cttaacgatg
    12601 tcatcggcac catcagtgat aaggtaatcc agcgattccc ctacaaaaac atagcctttt
    12661 gttccattac tatcttttgc ctgcgatagc ccagtgatgg tgtctgactg cgattgatac
    12721 tttcctgaac taccctttgc ggtatgggaa accagagcat acgagataca gcctgaaagc
    12781 attagcgcca gtgggaataa accggcagcc ttaaaaaatc ccttaagatt caacttcatg
    12841 attaatcctt taaacgagta gctaagccgt tgaaagcata ctcttctttc cctcctgttt
    12901 agcgcctgat atcccttttc agatttctgc ccgacgcatg tcattttttt atgcattgtt
    12961 ctttttgtga tctaaattgt agtacaacaa tataagtttg tactacatta cgtacacggc
    13021 aaacgcgaac gtcatcacgc tggtactaca aagttgccgc gttatgcatc gatcggggta
    13081 aagtagagaa gaacatacag agcacaagga ctctccatga ctctcaataa aaccgatcgc
    13141 attgtcatta cgctgggtaa acagatcgtt cacggcaaat acgtacctgg ctcgccactt
    13201 ccggctgagg cggagctctg tgaagagttt gcaacctcgc gcaacatcat ccgtgaggtg
    13261 ttccgttcgc tgatggcgaa gcggctgatt gaaatgaaac gttatcgcgg ggcgtttgtg
    13321 gcaccgcgta accagtggaa ttacctcgac actgacgtac tgcaatgggt gttggaaaac
    13381 gactacgacc cacggcttat cagtgccatg agcgaagtgc gaaatctggt ggaaccggcg
    13441 attgcccgtt gggcagcaga gcgcgcgact tccagcgatc tggcgcagat tgaatcggcg
    13501 ctgaacgaga tgattgccaa caatcaggac cgcgaagcgt ttaacgaagc ggatattcgc
    13561 taccacgagg cggtgctgca gtcggtgcat aacccggtgt tacagcaact tagcattgcg
    13621 atcagttcgc tgcagcgggc ggtttttgaa cgaacctgga tgggcgatga ggccaacatg
    13681 ccgcaaacgc tccaggaaca taaggcgctg ttcgatgcga tacggcatca ggacggcgat
    13741 gcggcagagc aggcggcgct taccatgatc gccagctcga cacgaaggtt aaaggaaatc
    13801 acatgacagc tcgctacatc gcaattgact ggggatcgac caatcttcgc gcctggcttt
    13861 atcagggcga ccactgcctg gagagcaggc aatcagaagc aggcgtcacg cgcctgaacg
    13921 gaaaatctcc ggctgcggtg ttagcagaag tcacgaccga ctggcgtgaa gagaatacgc
    13981 cagtggtaat ggcaggaatg gtcggcagca atgtcggctg gaaagttgct ccgtatttat
    14041 ctgttcctgc ccgtttttcg tctattggcg aacaattaac gtctgttggc gacaatatct
    14101 ggattattcc cggattatgc gtctctcatg acgataacca caatgtgatg cgcggcgaag
    14161 aaacacaatt gatcggcgcg cgaactctgg ctccttcctc tctttatgtt atgcccggta
    14221 cgcattgcaa atgggtgcag gccgatagcc agcaaatcaa cgattttcgc accgtgatga
    14281 ccggtgaact acatcattta ctgttaaatc actcattgat tggcgcaggt ttgccgccgc
    14341 aggaaaactc tgccgatgcc ttcgcggctg gccttgagcg cggccttaat gcgcccgcca
    14401 tattgccgca gctttttgaa gttcgcgcct cgcatgtgct gggaacactt ccccgcgaac
    14461 aggtcagcga atttctctct ggtttgttga ttggcgcaga ggttgccagt atgcgcgact
    14521 atgtgaccca tcaacacgcc atcacccttg tcgccggaac atcgctgacc gcgcgctacc
    14581 agcaagcctt tcaggcgatg ggttgcgacg tgacggcggt ggcgggcgac acggcatttc
    14641 aggctggtat aaggagcatc gctcatgcag tggcaaacta aacttccgct gatcgccatt
    14701 ttgcgcggca ttaagcccga cgaggcgctg gcgcatgttg gcgcggtgat tgacgccggg
    14761 ttcgacgcgg ttgaaatccc gctgaattcc ccacaatggg agcaaagcat tcccgccatc
    14821 gttgatgcgt atggcgacaa ggcgttgatt ggcgcaggta cggtactgaa acctgaacag
    14881 gtcgatgcgc tcgccaggat gggctgtcag ctcatcgtta cgcccaatat ccatagtgaa
    14941 gtgatccgcc gtgcggtggg ctacggcatg accgtctgcc ccggctgcgc gacggcgacc
    15001 gaagccttta ccgcgctcga agcgggcgcg caggcgctga aaatatttcc gtcatcggct
    15061 tttggtccgc aatacatcaa agcgttaaaa gcggtattgc catcggacat cgcagtcttt
    15121 gccgttggcg gcgtgacgcc agaaaacctg gcgcagtgga tagacgcagg ttgtgctggg
    15181 gcgggcttag gcagcgatct ctatcgcgcc gggcagtccg tagaacgcac cgcgcagcag
    15241 gcagcagcat ttgttaaggc gtatcgagag gcagtgcaat gaaaatcacc aaaattacca
    15301 cgtatcgttt acctccccgc tggatgttcc tgaaaattga aaccgatgaa ggcgtggtcg
    15361 gttggggcga gcccgtgatt gaaggccgcg cccgtacggt ggaagcggca gttcacgagc
    15421 tgggtgacta tttgattggt caggatcctt cgcgcatcaa tgacttatgg caagtgatgt
    15481 atcgcgccgg attttatcgt ggcggtccaa tcctgatgag cgccattgcc gggatcgacc
    15541 aggcgttatg ggatatcaaa ggcaaagtgc tgaatgcgcc ggtctggcaa ctgatgggcg
    15601 gcctggttcg cgacaaaatt aaagcctaca gttgggtcgg cggcgatcgt ccggcggatg
    15661 ttatcgacgg cattaaaacc ctgcgcgaaa tcggcttcga taccttcaaa ctgaacggtt
    15721 gtgaagaact ggggctaatt gataactccc gcgcggtaga tgcggcagtc aacaccgtgg
    15781 cacaaattcg tgaagctttt ggcaatcaga ttgagtttgg tcttgatttc cacggtcgcg
    15841 tcagcgcgcc aatggcgaaa gtgctgatta aagaactgga gccgtatcgc ccgctgttta
    15901 ttgaagagcc ggtgctggcg gaacaagccg aatactaccc gaaactggcg gcacaaacgc
    15961 atattccact ggcggcgggt gagcgcatgt tctcacgttt cgattttaaa cgcgtgctgg
    16021 aggcaggcgg tatttcgatt ctgcaaccgg atctctccca tgcaggcggt attaccgaat
    16081 gctacaaaat tgctggaatg gcagaagcct atgatgtgac ccttgcgccg cactgtccgc
    16141 tcggaccgat tgcactggcg gcttgcctgc atatcgactt tgtttcctat aacgcggtac
    16201 ttcaggaaca aagtatgggc attcattaca acaaaggcgc ggagttactc gactttgtga
    16261 aaaacaaaga agacttcagt atggttggcg gcttctttaa accgttaacg aaaccgggct
    16321 taggtgtgga aatcgacgaa gctaaagtta ttgagttcag taaaaatgcc ccggactggc
    16381 gtaatccgct ctggcgtcat gaagataaca gcgtagcaga gtggtaattc ctgccacgta
    16441 agcccctcat cgggcactaa aacagcaata caaaaatata accctctgta aattacaggg
    16501 catggtgagc ggcttcgcta tgcccaaaat ctggagaaag ctcgctatgg atattcccgt
    16561 taatgcagca aagccggggc gtcggcgtta tctgacgctg gtgatgatct ttattacggt
    16621 ggtcatttgt tatgttgacc gcgctaacct ggccgtggct tccgcccata ttcaggaaga
    16681 gttcggcatt acgaaagcgg aaatgggcta tgtattttcg gccttcgcct ggctttatac
    16741 gctatgccag atccccggcg gttggttttt agatcgcgta ggttctcgcg tgacttattt
    16801 tattgcgata tttggttggt cagtggcgac tttattccag ggctttgcca cgggattaat
    16861 gtcattaatt ggtctgcgtg cgataaccgg tattttcgaa gcgcccgctt tcccgaccaa
    16921 taaccggatg gtgaccagct ggttcccgga acatgaacgc gcttccgccg ttggttttta
    16981 tacgtctggt cagtttgtcg gtctggcgtt tttgactccg ctgctgatct ggattcagga
    17041 gatgttgagc tggcactggg tgttcattgt cactggtggt atcggcatta tctggtcgct
    17101 gatttggttt aaggtttatc agccgccgcg cctgaccaaa ggtatcagca aagctgaact
    17161 ggattacatt cgtgatggcg gcggtctggt ggatggtgat gcgccggtga agaaagaggc
    17221 gcgtcagccg ttaacagcca aagactggaa actggtgttc catcgtaaac tgatcggcgt
    17281 ttatcttggg caatttgcgg tggcttctac actgtggttt ttcttaacct ggttcccgaa
    17341 ctatttaacc caggaaaaag gaatcacggc gctgaaagca ggctttatga ccacggtgcc
    17401 attcctcgcg gcgtttgtcg gcgtcctgct ctctggctgg gtcgcggatc tgctggtacg
    17461 taagggcttt tcactgggct ttgcgcgtaa aacgccgatt atctgcggct tgctgatctc
    17521 cacctgcatt atgggcgcta actacaccaa cgatccgatg atgattatgt gcctgatggc
    17581 gctggcattc ttcggcaacg gttttgcttc gattacctgg tcgctggtct cttctctggc
    17641 accgatgcgc ctgattggtt taaccggcgg cgtgtttaac ttcgccggtg gtctgggcgg
    17701 catcaccgtt ccgctggtgg tggggtacct ggcgcagggt tacggtttcg cacctgcact
    17761 ggtttatatc tccgccgtcg cgttgattgg cgcgctctct tacatcctgc tggtgggcga
    17821 tgtgaagcgc gttggctaat ctttcaactg tggaatatgc gccataccac tgcgcataat
    17881 ccactttctt aaagccggtg cggtcaggca tcggcttttt actatcttgc cgaagagttt
    17941 taaacgcagt ttgcgggtgg cgcgccagta agcggtattg agcttctctg gctgcttcag
    18001 taacaccgca cgcagaatgt ctgcgctatc cagcgcatag ctaatcccct ccagcgaact
    18061 ggcgctgata aatcctgccg cttcgccaat cagaaaggcg ttgtccttac cgcagacaaa
    18121 atcctgccag cgtgagggaa acagcaccgt gcatttttcg cttttcaccg ccttaccaaa
    18181 ctggaactga aaggcgctca ttttctcttt cagcgtcgtg aaacgcgtct gaccgtcttt
    18241 cattggataa gcaccgccaa agataaaata accgtctttg ctgatactcc atgaataaca
    18301 gttagttatc gaattatcaa agatgcagga gtagaacggc accggatgtt tctccgcgaa
    18361 ccactgctgg atagcgacat atttacggat ttgatgatcc gggtagagat gtcgccgcac
    18421 catcgagttt gcgccatcgg caccgaccag atagcgggcg gtaatatgtt gctcccagcc
    18481 gtctgcacga aaaatgacat gccatttatc atcctcacgc cagatttttc ggcacaggct
    18541 atcgtgataa acctcaacgc tggtggggat cagcgatttc atccacaagt cgaaagcatg
    18601 gcgattaata ttgatatagc ttcgctggta gttacgcgtg agcgatgcgg cgacgtcgac
    18661 agttttgacg ctgaaaatct gtggattggc gatcacatcg acaggaagcg tcagtccatc
    18721 gcgaataaaa gatcgctgcg cgtccggtgc cagcagaccg ccgcaaggtt tgctgaaacc
    18781 ttcagtacca cactggtgct ttttatccag cgcgatcacc tgcattttgc ctgctaattt
    18841 tcgcgccaac gccgatcctg ccgggccgag gccaataatc gccacgtcga aatgttccat
    18901 cttttcactc acattcatca cgatggcaaa agactattgt ctgaaagtga agtccttgtg
    18961 aagtatgatg gtgggacccg ttttgtatca ggaccgcgcc atgaaacaga taacctttgc
    19021 tccccgtaat cacctgctca ccaataccaa tacctggacg cccgacagcc agtggctggt
    19081 atttgacgtg cgtccttctg gggcgtcgtt taccggcgag accattgagc gtgtgaatat
    19141 ccataccggc gaggtcgagg ttatctatcg cgcgtcacag ggcgcacacg tcggcgtggt
    19201 gaccgttcat ccgaagtcag agaaatatgt tttcatccat ggcccggaaa atcctgatga
    19261 aacatggcat tacgatttcc atcatcgacg cggagtcatt gctgaaggcg gcaaggtgag
    19321 caatctcgat gcaatggata ttaccgcgcc gtatacgcca ggagcgctgc gcggcggcag
    19381 ccatgtgcat gtctttagcc cgaacggtga aagggtgagc tttacctata acgaccatgt
    19441 aatgcatgaa ctcgatccgg cgctggattt gcgaaacgtc ggtgttgctg cgccgtttgg
    19501 cccggtcaac gtacaaaagc agcatccgcg tgaatacagc ggtagccact ggtgcgtgct
    19561 ggtgagtaaa accacgccca cgccgcagcc tggcagcgat gaaatcaatc gtgcttatga
    19621 agaaggatgg gtaggaaatc acgcgctggc gtttattggc gacacacttt cgccaaaggg
    19681 cgagaaagtg ccggagctgt ttatcgttga gttaccgcaa gatgaagctg gctggaaagc
    19741 ggcaggtgat gcgccgttaa gtggaacgga aaccaccctg cccgcgccac cgcgcggcgt
    19801 cgtgcagcga cgtttaacct ttacccacca tcgggcttat ccggggttag tcaacgtccc
    19861 gcgccactgg gtgcgctgta atccgcaggg tacgcaaatc gcgtttttaa tgcgtgatga
    19921 taacggcatt gtgcaactgt ggcttatctc gccacagggc ggcgagccgc gccagttaac
    19981 ccataacaaa acggatattc agtctgcatt taactggcat ccgtcaggag aatggttggg
    20041 ctttgtgctg gataatcgaa ttgcttgtgc ccatgcgcaa agcggcgagg ttgagtattt
    20101 aaccgaaaac cacgccaatc caccttctgc ggacgccgtg gtcttctcgc cggatggtca
    20161 atggctggcg tggatggaag gtggccagct gtggatcacc gaaactgatc gctaaatcag
    20221 ttatcaggca ttctggccgg tggaataacc gcattggtgg cttgcgcgtt ggcttcgctt
    20281 ttttcaacgc gtgagcgcac cgagctgtct ttgcggaaca catcccacgg cagtaaaagc
    20341 gtgtccatca cagcggtaaa cggcatatcg agaatcgcca gcgacttagt gccccagttg
    20401 gtttcatcgt cgccaatcat ggtggcgctg gcgcgggtgc cgggatacgt tccttctttc
    20461 cctccggtat gggacatcac gctggagcat cctccgagta atgtcattcc gctgcatatc
    20521 atgaacgcta acaacacatt tcttatcata ataaattcat ctgttgatcg tgggtgttgg
    20581 cctgatgagt tatagcgatc ccttgctgaa aataacatca tcattacgtc gcactgtggc
    20641 ggctatcgca ctttaacgtt tcgtgctgcc ccctcagtct atgcaataga ccataaactg
    20701 caaaaaaaag tccgctgata aggcttgaaa agttcatttc cagacccatt tttacatcgt
    20761 agccgatgag gacgcgcctg atgggtgttc tggctacctg acctgtccat tgtggaaggt
    20821 cttacattct cgctgatttc aggagctatt gattatgcgt aactttgatt tatccccgct
    20881 ttaccgttct gctattggat ttgaccgttt gtttaaccac ttagaaaaca accagagtca
    20941 gagtaatggc ggctaccctc cgtataacgt tgaactggta gacgaaaacc attaccgcat
    21001 tgctatcgct gtggctggtt ttgctgagag cgaactggaa attaccgccc aggataatct
    21061 gctggtggtg aaaggtgctc acgccgacga acaaaaagag cgcacctatc tgtaccaggg
    21121 catcgctgaa cgcaactttg aacgcaaatt ccagttagct gagaacattc atgttcgtgg
    21181 cgctaacctg gtaaatggtt tgctgtatat cgatctcgaa cgcgtgattc cggaagcgaa
    21241 aaaaccgcgc cgtatcgaaa tcaactaatt ccttaaggcc gcctggcgcg gcctgacatc
    21301 tccatgctcg ccgtcaggga gcatatgcga atcttcggat ttgcaggtac ttactcgctt
    21361 cttagaagga gaaatgacta tgcgtaactt cgatttatcc ccactgatgc gtcaatggat
    21421 cggttttgac aaactggcca acgcactgca aaacgccggt gaaagccaga gcttcccgcc
    21481 gtacaacatt gagaaaagcg acgataacca ctaccgcatt acccttgcgc tggcaggttt
    21541 ccgtcaggaa gatttagaga ttcaactgga aggtacgcgc ctgagcgtaa aaggcacgcc
    21601 ggagcagcca aaagaagaga aaaaatggct gcatcaaggg cttatgaatc agccatttag
    21661 cctgagcttt acgctggctg aaaatatgga agtctctggc gcaaccttcg taaacggttt
    21721 actgcatatt gatttaattc gtaatgagcc tgaacccatc gcagcgcagc gtatcgctat
    21781 cagcgaacgt cccgcgttaa atagctaact agctattctc tttgccccgc cattctggtg
    21841 gggctttttt tgtcttactt actcaacaat gcgttaaatt tcgactgttt aagatatttc
    21901 ggcacgttct ttcccgtgat aatgtgcgct ataaggcaaa tctgcttcac cgattcagcc
    21961 ataatccgta gcaattaaaa atgttatctc aagagaaatg gacgatgagt gatatagcat
    22021 taacggtcag tattctggct ttggtggcag tcgtcggttt gtttatcggc aatgtcaaat
    22081 ttcgcggcat aggattaggt attggcggcg tgctgtttgg tgggatcatc gtcggccatt
    22141 ttgtttctca ggcggggatg acattaagta gcgatatgct gcatgttatt caggaatttg
    22201 gcctgatcct gttcgtttat actatcggga ttcaggtagg gccgggcttc tttgcctcat
    22261 tgcgcgtctc cggattacgc ctcaacctgt ttgctgttct gatcgtcatc atcggtggtc
    22321 tggttaccgc catcctgcat aaactgtttg atattccact gccggtagtg ctggggattt
    22381 tctccggtgc ggttaccaat acgccagcgc tgggggcagg gcagcagatt ttgcgcgacc
    22441 tgggtacacc aatggaaatg gtcgatcaga tggggatgag ttacgcgatg gcgtatccat
    22501 tcggcatttg cgggattttg ttcaccatgt ggatgttgcg ggttattttc cgcgtcaatg
    22561 tcgagacaga agctcagcag cacgagtctt cacgcaccaa tggcggcgcg ctgatcaaga
    22621 ctatcaatat tcgcgttgag aaccctaacc tgcatgattt agccattaaa gatgtaccga
    22681 ttctcaacgg cgacaaaatt atctgctcgc gtctgaaacg cgaagaaacc ctaaaagttc
    22741 cttcgccaga taccattatc caactgggcg atttgctgca tctggtgggg cagccagcgg
    22801 atttacataa tgcgcaactg gtgattggtc aggaggtcga tacttcgctg tccacgaaag
    22861 gcactgattt gcgcgtcgag cgtgtggtgg tcaccaatga aaacgtgctc ggaaaacgta
    22921 ttcgcgacct gcactttaaa gaacgctatg acgttgttat ctcgcgcctg aaccgtgccg
    22981 gggtcgaact ggtcgccagt ggcgatatca gcctgcagtt cggcgatatc ctcaacctgg
    23041 tggggcgtcc gtccgcaatt gatgccgttg ccaatgtgct ggggaatgcg cagcaaaaac
    23101 tgcaacaggt tcagatgctg ccagtgttta ttggcatcgg gcttggcgta ttgttaggtt
    23161 ctattcccgt ctttgtgcca ggattcccgg ccgcgttgaa actggggctg gcgggcggtc
    23221 cgctgattat ggcgttgatc ctcgggcgta tcggcagtat cggcaagctg tactggttta
    23281 tgccgccaag tgccaacctc gcgctgcggg agctggggat cgtgctgttc ctctcggtcg
    23341 ttggtctgaa atctggtggg gattttgtaa ataccctggt caatggcgaa gggctaagct
    23401 ggattggtta tggtgccctg atcaccgccg ttccgctgat tactgttggc attctggcgc
    23461 ggatgttagc caaaatgaat tacctgacca tgtgcgggat gctggcaggt tccatgaccg
    23521 atcctccggc gcttgcgttt gctaataatc ttcatccaac cagcggtgcg gcggcgctct
    23581 cttacgccac tgtctatccg ttagtgatgt tcctgcgcat tatcaccccc caattactgg
    23641 cggtgctctt ctggagtatc ggttaactct tttccgggtg gagtcgccgt aaatggtact
    23701 ccacctggta ttcgctggca tttctgaaca tcactgaata attcaaaaac tccccgctct
    23761 cgctatatga caacgaggtg atccgcagca gtggcgtgtg ttccgctacc ttcatttgcc
    23821 gcgccagcag tctatcggcg agcactggcg tcaggctttc ataattaccg ccaatcaaaa
    23881 tcccgcactc ttgttcaata tattcaaact tcgacccttc cagatgttgc agcgaaagat
    23941 tacggaacag ttttaccggc atatagctgt cttccagcat cagcggtttc ccttccacaa
    24001 aacgaacgcg acgggagaag tagatctgct cgttgatttg aatccgtaac tggctggcaa
    24061 tggccggagg cgcaggcatg atttcaaaaa tcagcacctg gctggtgacc gtttttccct
    24121 gccgttttaa cacctccacc agcccggtca ggctggcggt ttgatgcagt acatctttgc
    24181 gcaccaggta agtgccgctg ccgtggcggc ggaccaccaa tccccacgct accagcaggt
    24241 caatggcttt acggatggtc atccgcgata ccgcaaattc ttccgccaac tttttttcac
    24301 cgggaagaag gctatttagc gtgaaatctg cggaattaag tcgaattctt aaccgctccg
    24361 caatgctttt gtagatcatc tctagatctc ttttttgcct gcaagcacgg gtaatgcgcc
    24421 cacaagttct gcttaatcga ttgaaaaaac atcttttttt taaagatgtg ttcgatgctg
    24481 tgtacctgtg ctcacagatg tctacttttt cgcgaaaacg tagatctcta ccgcccaacg
    24541 aaaagcatga aagcgatcac gaatcccatt gggtcgtcat gttctgccga tcgcatcttc
    24601 ctatcctcgc tccaggcctg ccgcataacc aatcaggctt cctacttaca gaattgagaa
    24661 aagaggatgt ggaaatgctc agtcaaattc aacgctttgg cggcgcgatg ttcacgccag
    24721 tgctgctgtt tcccttcgcc gggattgtgg cgggtcttgc catcttgctg caaaacccga
    24781 tgtttgtcgg ggaatcactg accgatccga acagtttatt cgcgcaaatc gtacacatta
    24841 ttgaagaggg cggttggacg gtgttccgta atatgccgct gatttttgct gtcggtttac
    24901 ccattggcct tgctaagcaa gcgcaggggc gtgcttgtct ggcggtgatg gtgagtttcc
    24961 tgacctggaa ctatttcatc aacgcgatgg gaatgacctg gggaagctac ttcggcgtcg
    25021 atttcactca ggacgcggtg gcaggtagcg gtctgacaat gatggccggg attaaaaccc
    25081 tcgataccag cattatcggc gcaattatca tttccggcat tgtgacggcg ctgcataacc
    25141 gtctgttcga taaaaaactg ccggtttttc tcggcatttt ccaggggacg tcttatgtgg
    25201 tgattatcgc cttcctggtg atgatcccct gtgcctggct gacgttgctc ggctggccaa
    25261 aagtacaaat ggggattgaa tctctgcaag cgttcctgcg ttcggcgggt gcgcttgggg
    25321 tgtgggttta caccttcctc gaacgtattc tgatcccaac cggtttacac cacttcatct
    25381 acggacagtt tatctttggt ccggcagctg ttgaaggcgg cattcagatg tactgggcgc
    25441 agcatctgca agagttcagt ctgagcgccg agccgctgaa atcgttgttc ccggaaggcg
    25501 gttttgccct gcacggtaac tcaaaaatct ttggtgccgt gggcatttct ttagcgatgt
    25561 acttcactgc cgcaccggaa aatcgggtaa aagtggcggg cttgctgatt cccgcaacct
    25621 taaccgccat gctggtggga attaccgaac cgctggaatt taccttcctg ttcatttcac
    25681 cgttgctgtt tgcggtacac gccgtgctgg cggcctcaat gtcgaccgtg atgtatctct
    25741 ttggtgtggt gggcaacatg ggcggaggtc tgattgacca ggttttaccg caaaactgga
    25801 tcccgatgtt cagcaaccac gcggatatga tgctgaccca aatcgccatt gggttgtgct
    25861 ttaccctgct gtacttcgtg gttttccgca cactgattct gcagttcaac atgtgcacgc
    25921 cgggacgtga agatgcggaa gtgaaactct actcaaaagc cgaatacaaa gcctcgcgag
    25981 gccaaaccac cgcggcagag ccaaaaaaag agctggatca ggctgccggt atcctgcaag
    26041 ccctgggcgg ggtcggcaat atctccagca ttaacaattg cgcgacgcgt ttacgtattg
    26101 cactgcatga catgtcacaa acgctggatg acgaagtctt taaaaagctg ggagcgcacg
    26161 gcgtcttccg tagtggcgat gccattcagg tgatcattgg tctgcatgta tcccagctgc
    26221 gtgaacagct cgatagctta attaattctc atcaatcagc agaaaatgtt gccattacgg
    26281 aggcagtata atgaccaaat tctcagtggt tgtcgcaggc ggtggaagca cctttacgcc
    26341 aggcatcgtg ttgatgctcc tggcgaatca ggagcgtttc ccgcttcgtg cactgaaatt
    26401 ttatgataac gatggcgcgc ggcaggaagt gattgccgaa gcctgtaaag tcatccttaa
    26461 agagaaagcg ccggacattg cgtttagtta caccaccgat cctgaagtgg cgttcagcga
    26521 cgttgatttt gtcatggcgc acatccgcgt cggcaagtac ccgatgcgcg aactggatga
    26581 aaaaatccca ctgcgccacg gtgttgttgg tcaggaaact tgcggacccg gcggaatagc
    26641 gtacggcatg cgttccattg gcggcgtcct ggaactggtg gattatatgg aaaaatattc
    26701 accaaatgcc tggatgctca actactccaa cccggcagcc attgtcgcag aagccacgcg
    26761 tcgtctgcgc ccgaatgcga aaatcctcaa catctgtgac atgccaatcg gtattgaaag
    26821 ccggatggcg caaattgttg ggctgcaaga tcgcaaacag atgcgcgtgc gctactacgg
    26881 cctgaaccac tggtggtcgg cgatatcccg cagtttcaga aagggttaat gagtcagcaa
    26941 gtggcggtgg aaaaactggt cgtggacgcc tgggaacagc gttcatatca gcacctgtgg
    27001 caggcgatta cgttgtcgaa aacggtaccg agcgcctcgg tcgccaaagc tattctggat
    27061 gagttgctgg aggccaacaa agcgtactgg ccagagttac gttaattgtg tggactggca
    27121 tccgttgggt gctggtccgt attctttagc acggctgacg gcgcataacc aaatttatgt
    27181 ttaaaggctt tgctgaaatg aaaggagtcg aagaagttga gcgtatcagc gacttcgcca
    27241 accgagtttc cttgttgctt taatagcgat agcgccagat ccagacgcgc atcgaggtaa
    27301 tattctttcg gcgtcttgcc ggtatagcgt aaaaacagac gacgcaacca ggcttcgcta
    27361 caggggatcg tggcagccat atcagctacg ctccagcgtt gttgcagact ggcatgtaaa
    27421 gtggcaatta atttttcaat ttgccgccgt tgtggatctt ttttaccatc tgcgtacata
    27481 agacaaatcc actgataaat aattttcgtc agaaaagcga ctgccagatt attttttatt
    27541 gcttctggtg aagttattaa ctcagcaact tcggtgagtt cctgattata aatttcgcca
    27601 ttataaataa cgctttgctg accaacggga atatccatca tactggtggg ggtaaattcc
    27661 atccagtact gttcccagac taaaccttca cagtgataag agtgaatatc cattggcttt
    27721 aagaatataa tacagttgcc atgcagtgtt atttgttcgc cattctttaa aagaattttc
    27781 ccacatcctt gtacggtata caccgcaacc catgagttgg cgataagcgg tttcttcttg
    27841 tcccgcggcc agatcacccg gtaatgctcg tcggcgtagg tatgccagag cgagatcaga
    27901 gaaattccgc tggagatcac attttcgtta atcaataagg gaatattgta cggagtttcg
    27961 ttttttacat ctgaactttg caattttcca ttcattttaa tatccctccg gcgaattatg
    28021 ctcacaacct gaacttaaca gaaaacaatc cgttcaggga tacgacgttt gtattttaag
    28081 aatctgactg cctgacccga cgcattttac ctctccctat attcatgcgt ccgggacata
    28141 aacataaata agggctatga gatgaattcg ttacaaatct tgagttttgt cggttttacg
    28201 ctgctggtgg cggtgatcac ctggtggaag gtccgcaaaa cagataccgg atcgcaacaa
    28261 ggctattttc ttgccggacg ttcactaaaa gcgccggtta ttgccgcttc gttaatgcta
    28321 accaaccttt ccacggaaca actggtcggc ctttccgggc aggcctacaa aagcggcatg
    28381 tcggtgatgg gctgggaagt gacttcagcg gtgacgctga tcttcctcgc gctaatcttt
    28441 ttaccgcgct atctgaagcg cggcattgcc accatccccg attttctgga ggaacgttat
    28501 gataaaacga cgcgtattat catcgacttc tgcttcctca ttgccaccgg cgtctgcttt
    28561 ctgccgattg ttctctactc cggcgcgttg gcgctcaaca gcctgtttca cgtcggggaa
    28621 tcgctacaga tttctcacgg tgcggctatc tggctactgg taattttgct tggtctggcg
    28681 ggaattttgt atgcggtgat cggcggactg cgcgcaatgg cagtggcgga ctccatcaac
    28741 ggtattgggc tggttatcgg cgggttgatg gtgccggtat ttggcctgat cgcgatgggc
    28801 aagggcagct ttatgcaggg cattgagcaa ctcaccaccg ttcacgccga gaaattaaac
    28861 tcaatcggtg gcccgaccga tcccttgccg attggcgcgg catttaccgg tttgattctg
    28921 gtgaacacct tttactggtg tacaaatcag ggcatcgtgc aacgcacgct ggcgtcaaaa
    28981 agcctggcgg aagggcaaaa gggggcgctg ttaacggcgg tgctgaaaat gctcgacccg
    29041 ctggtactgg tgctgccagg gttgattgcg tttcatctgt atcaggattt accgaaagcc
    29101 gacatggcct acccgacgct ggtcaataac gttctgccag tgccaatggt gggtttcttc
    29161 ggcgcggtgt tatttggtgc ggtgatcagt accttcaacg gctttctgaa tagcgccagt
    29221 acgttattca gtatgggtat ttaccgtcgc atcattaacc agaatgccga gccgcagcag
    29281 ctggtcaccg tcgggcgcaa atttggtttc tttatcgcta tcgtttcggt gctggtcgcg
    29341 ccgtggatcg ccaacgcgcc gcaggggctg tatagctgga tgaaacagct caacggcatt
    29401 tacaacgtgc cgctggttac catcatcatt atgggctttt tcttcccgcg catcccggcg
    29461 ctggcggcaa aagtggcgat ggggattggc ataatcagct acatcaccat caactatctg
    29521 gtgaagttcg acttccattt cctctatgtg ctggcctgta cgttctgcat caacgtggtc
    29581 gtgatgctgg tgatcggttt tatcaaaccg cgcgccacgc cgttcacctt caaagatgcg
    29641 tttgcggtgg acatgaaacc gtggagaaac gtcaagatcg cgtcaattgg catcctgttc
    29701 gcgatgattg gcgtctatgc cgggctggct gaattcggcg gctacggtac gcgctggtta
    29761 gcgatgatca gttatttcat tgccgccgta gtgattgtct acctgatttt tgacagctgg
    29821 cggcatcgtc acgacccagc cgtaaccttt actcccgacg cgaaggatag cctatgaaac
    29881 gccccaattt tctgttcatc atgaccgata cccaggccac caatatggtc ggttgctata
    29941 gcggtaaacc gctgaatacg caaaatattg atagtctggc ggcggaaggt attcgcttta
    30001 attccgccta cacctgttca ccggtttgta cgcctgcacg cgccggacta tttaccggta
    30061 tctacgctaa ccagtccggc ccgtggacca acaacgtcgc gccaggcaaa aacatctcca
    30121 ctatggggcg ctactttaag gatgccggct atcacacctg ttacatcggc aaatggcatc
    30181 tcgacggtca tgactatttc ggcactggcg agtgtccgcc ggagtgggac gctgattact
    30241 ggttcgatgg ggcgaactac cttagcgaac tgacggaaaa agagatcagc ctgtggcgca
    30301 atggcctaaa cagcgttgag gatttacagg cgaaccatat cgacgaaacc ttcacctggg
    30361 cgcaccgcat cagcaatcgg gcggtagatt ttctgcaaca gcccgcgcgc gccgaggaac
    30421 ccttcctgat ggtggtttcg tatgatgagc cgcatcaccc gttcacctgt ccggtggagt
    30481 atttagagaa atacgctgat ttttactacg atctgggcga gaaagctcag gatgacctgg
    30541 cgaacaaacc ggaacatcac cgcttatggg cgcaggcgat gccatcgcca gtcggtgatg
    30601 acgggcttta tcaccatccg ctctattttg cctgtaatga ctttgttgat gaccaaatcg
    30661 gacgggtcat caatgcctta acgccagagc aacgtgaaaa tacgtgggtc atttatactt
    30721 ccgatcacgg cgaaatgatg ggcgcacata agctgatcag taaaggagcg gcgatgtatg
    30781 acgacatcac ccgtattccg ctgatcatcc gttcgccgca aggggagcgg cgacaggtcg
    30841 atacgccagt cagtcatatc gatttactgc cgacaatgat ggcgctggca gatattgaaa
    30901 aaccagagat tctgccgggg gaaaatatcc ttgccgtgaa agagccacgc ggtgtaatgg
    30961 tggaatttaa ccgctacgag attgagcatg acagctttgg cggttttatt ccggtgcgtt
    31021 gctgggtgac ggatgacttt aaactggtac tcaacctctt caccagtgat gaactttacg
    31081 atcgccgtaa tgacccaaat gaaatgcata acctgatcga tgatatccgt tttgcagacg
    31141 ttcgcagcaa aatgcatgac gccttattgg attacatgga caaaattcgc gatccgttcc
    31201 gcagttacca atggagcctg cgtccgtggc gtaaagatgc actgccgcgc tggatggggg
    31261 catttcgtcc acgcccacaa gatggctatt cgccggtggt acgtgactat gacaccggcc
    31321 taccgacgca aggagtgaaa gtggaagaga aaaaacagaa gttctgacga taatgcccgc
    31381 tgatgaacac ccggcgggca ttattcaggc tgcttaaacc agtgaaccgc cggtcaggaa
    31441 ggaaaaaatc aggaatatca gcaaaatgct gcacacgatg ccgataccaa aaagcaaggt
    31501 atggaaagcc agcgtcccgc cgccaaaaac cagcgcgccg cgaatgcccc agcgattttc
    31561 cttacgcata ccgccaataa atgcgcaaag tagcgcagca atggccagtg cgataccgct
    31621 ttgatcgagg attttatcga catctacgtc ctcttttttc tccacggtgg taattttttc
    31681 gccttttatt ccggcgagaa gacctctttt aatttcagcc gttttgtccg ccacgatgct
    31741 ttcaaacgtt ggcggtggtg cggaaaaagg gccgaatgaa aagtggataa tccccatcat
    31801 taaagcgatg gcaccgaaca gcatgcccaa tgaactgatt ttattttgag ctatgatacc
    31861 catctgacct ccttgtagcg gatggcgaaa gcatatcagg aaacgggcgg acgaaattct
    31921 taaaaaaaaa ccgctaaagg tagagcgtta gtgaaattgc aaaggagcaa caatgaaaat
    31981 ttcccgcctt ggagaagcgc ccgattaccg cttctcgctg gctaatgagc gtacttttct
    32041 ggcgtggatc cgtaccgcac taggatttct ggcggcgggg gttgggcttg atcaacttgc
    32101 gccagatttc gccacgcccg tcattcgtga actgctggcg ttgttgttgt gtctgttttc
    32161 cggcgggtta gcgatgtatg gctacctgcg ctggttacgc aatgaaaaag cgatgcgtct
    32221 gaaagaggac ctgccctaca ccaacagctt attaatcatt agcttaatat tgatggtcgt
    32281 ggcggtgatc gttatgggac tggtgttgta tgccggatag ccgcaaagcc agacgcattg
    32341 ccgacccagg actgcagccg gagcgcacat cactggcgtg gtttcgtacc atgctgggct
    32401 acggcgcgtt gatggcgttg gctatcaaac acaactggca ccaggcgggc atgttattct
    32461 ggatttcgat tggcattctc gccatcgtgg cgctgatcct ctggcactac acccgtaatc
    32521 gcaatttaat ggatgtcacg aatagcgatt tttcccaatt tcacgtagtc cgtgacaaat
    32581 ttttgatctc cctcgcggtg ttatctctcg caatactgtt tgctgtaacg catatacatc
    32641 aacttatcgt atttattgag agagtcgcat gacaggaagt caggtcattg atgctgaaga
    32701 ggacaggcat aaactggttg tagagtacaa ggatgctctg caacctgccg atttttatca
    32761 caatttcaaa cagcggggca tccgcgccgt acagctcatt ccctatcttg aatttgatga
    32821 ccggggcgat ctgacggccg cttcggtgac agcagagctg tgggggaaat ttttaattgc
    32881 cctgttcgag tgttgggtgc gggcagatat cagtcgtatc tcgattgagc tttttgacgc
    32941 caccttacaa aaatggtgtg gcagcgaaaa cccgcaaccg cgccgtgact gccaggcgtg
    33001 cgactggcat cgcctgtgcc cgcacgctcg ccaggagacg ccagacagcg tgctttgtgc
    33061 gggctatcag gcgttttatt cttactccgc accgtatatg cgggtgatgc gtgatctgat
    33121 aaagcagcat cgttctccca tggagctgat gacgatgctg cggtgacgtg cgcttaaacg
    33181 ggctgcccct gatgcgacat ccgcgtcgcc agcggcagcc agcacagcac gatcaacaat
    33241 cccattaagg tcatcaacaa ccccaggctg ccctgaccgg tttgcggcaa catcgcagag
    33301 agcgacgcca gcacgccgga accaatgttt tgcagaccgc cgaccagcgc gccagccgtg
    33361 cccgccagga aggggaacgg ctccatcgcg ccgctggtcg ccagcggaaa cagcatcccg
    33421 gcaccgaaaa agaacagcgc ggcgggaacg agcagcgtcc agacattcat cacgccaaac
    33481 cagtcgggga tccacatcag caagccagcc agcaggcagc agataaccga ctgccacatt
    33541 aacgtggaga agcgtttatt gggacgtccg gcaaaccatg cgccaaaaaa cgctgccgga
    33601 atcggcagaa taaacaaaat actgaccgtc atactgctca gccctaacac cgcgcccatc
    33661 agcacgccgg agcaggcttc aaaggcggca atcccggcca gaccgccaat cagcatcagc
    33721 aaataacagt taaaaccgct gttaccgaaa agcgttttat aactggtaag caggcgcgtg
    33781 cgcggtgcat cgaccggacg cgtttccggc atccagcggg ccatactgaa ggtcacacca
    33841 gcacaaagaa ccaacaaaaa gagataacag gcgcgccagt tccacatcgt atccagcaga
    33901 ccgccgatta gcggtgcgag caacggactg acgagaatcc ccatgtttaa caggctgtta
    33961 gcatggcgca actgtgtccg ttcatataaa tctcgcggca aagtacgcgc cattacgccg
    34021 ccaacgccgg tgcccatccc ctgcatcgcg ctggcggcaa tcaacaccgt caaactggag
    34081 gtcgtgaccg cgaccagcgt tgccagcata aaaatggaca ttccgacgag gatcaccggt
    34141 cggcggccca cgcggtcgga aatcgggcca taaaacagct gtgagacacc gtaagtcagc
    34201 agataagcgc ccattacgct ctgcaccgcc ccttcacgga cgttgagatc gcgcgccata
    34261 tcggcaatag ctggaatata aatggtttgc gccatctgac cgacggccac gagtaatacc
    34321 aacatcaata acaaattgac gtttctttgc cttttcatta tcacggatgc ttttataaaa
    34381 ataattagaa taagtcacta cgcattccca taaatgcggg agaggaatct atcacattga
    34441 tgaatgttag ccagatatac gccaggaatg gggaattgtt tagcggcaga atatgtaaac
    34501 aaaagcggca ataaatgttg ccgggaggga ttacgtgcga actgtaaccc tctccccaaa
    34561 ggggcgaggg ggaaaccacc gttccctttc agaaaatgag ctaaacattg cacgggacgg
    34621 tcccctcgcc cctttgggga gagggctagg gtgaggggca caggcagcgc aggtgcaaac
    34681 attctgctgg tagaagaagc ccccaactcc aacccgcacg ctaaatataa aaggggagcg
    34741 gttacccgct cccctttggt gcgacttgaa tctgaattac ttcaggtatt tcagaacagc
    34801 atcaagcagt tgcagtgctg caacaatgag tttgaggata agaatggcga tatccaccag
    34861 gctcatacgc gtctcctgtg gttcaggagc actgccagct gacgtacctt tccgctgcct
    34921 gttgccagct gttgtgcacg cggtatctta aggagaaacg ttgtgcttgt tgacataaca
    34981 cagtgtgctc acgcggggtt aaggcgctga cggcaccacc cgtttcagcc aggacttagt
    35041 gcgccgggta acgatgcggc ccccgcataa cacattgcgt acagtgatat tatagaagtt
    35101 tactgtataa ataaacagta atatttggac aaaacgcaaa ctgtgatcga tactcaacta
    35161 tgccctaaat acgtcaaaat tcgtgccgaa attgcgcgtt ctgcgcggaa cacgtatact
    35221 ttcagtgttg acataataca gtgtgctttg cggttaccag ccgcaggcgg ctgatgaaac
    35281 ctcgctccgg cggggttttt tgttacctgc aattcagtac aaaacgtgat cagcccctca
    35341 attttccctt gctgaaaaat tttccattgt ctcccctgta aagctgtgct tgtataaata
    35401 ttgttaaaca caaaaccaac aaggtcccca atgactactt ccatgttcaa cgcaaaacta
    35461 ctaccaactg cgctatccgc cgcagtggtc gtcgtgcgtg tggtggtggt cgtcggcaat
    35521 gcgccgtagg gactggaaca acacacgatt ccaaaacccc gccggcgcaa accgggcggg
    35581 gtttttcgtt taagcacctc ccggaaagtc ggcccagaag aaaaggactg gagcatggca
    35641 agttcgggca caacatcgac gcgtaagcgc tttaccggcg cagaatttat cgttcatttc
    35701 ctggaacagc agggcattaa gattgtgacg ggcattccgg gcggttctat cctgcctgtt
    35761 tacgatgcct taagccaaag cacgcaaatc cgccatattc tggcccgtca tgaacagggc
    35821 gcgggattta tcgctcaggg gatggcgcgc accgacggta aaccggcggt ctgtatggcc
    35881 tgtagcggac cgggtgcgac taacctggtg accgccattg ccgatgcgcg gctggactcc
    35941 atcccgctga tttgcatcac cggtcaggtt cccgcctcga tgatcggcac cgacgccttc
    36001 caggaagtgg acacctacgg catctctatc cccatcacca aacacaacta tctggtcaga
    36061 catatcgaag aactcccgca ggtcatgagc gatgccttcc gcattgcgca atcaggccgc
    36121 ccaggcccgg tgtggataga cattcctaag gatgtgcaaa cggcagtttt tgagattgaa
    36181 acacagcccg ctatggcaga aaaagccgcc gcccccgcct ttagcgaaga aagcattcgt
    36241 gacgcagcgg cgatgattaa cgctgccaaa cgcccggtgc tttatctggg cggcggtgtg
    36301 atcaatgcgc ccgcacgggt gcgtgaactg gcggagaaag cgcaactgcc taccaccatg
    36361 actttaatgg cgctgggcat gttgccaaaa gcgcatccgt tgtcgctggg tatgctgggg
    36421 atgcacggcg tgcgcagcac caactatatt ttgcaggagg cggatttgtt gatagtgctc
    36481 ggtgcgcgtt ttgatgaccg ggcgattggc aaaaccgagc agttctgtcc gaatgccaaa
    36541 attattcatg tcgatatcga tcgcgcagag ctgggtaaaa tcaagcagcc gcatgtggcg
    36601 attcaggcgg atgttgatga cgtgctggcg caattgatcc cgcaggtgga agcgcaaccg
    36661 cgtgcagagt ggcaccagtt ggtagcggat ttgcagcgcg aattcccgtg tccaatcccg
    36721 aaagcgtgcg atccattaag ccattacggc ctgatcaacg ccgttgccgc ctgtgtcgat
    36781 gacaatgcga ttatcaccac cgatgtgggt cagcatcaga tgtggaccgc gcaagcttat
    36841 ccgctcaatc gcccacgcca gtggctgacc tccggtgggc tgggcacgat gggttttggc
    36901 ctgcctgcgg cgattggcgc ggcgctggcg aacccggatc gcaaagtgtt gtgtttctcc
    36961 ggcgacggca gcctgatgat gaatattcag gagatggcga ccgccagtga aaatcagctg
    37021 gatgtcaaaa tcattctgat gaacaacgaa gcgctggggc tggtgcatca gcaacagagt
    37081 ctgttctacg agcaaggcgt ttttgccgcc acctatccgg gaaaaatcaa ctttatgcag
    37141 attgccgccg gattcggcct cgaaacctgt gatttgaata acgaagccga tccgcaggct
    37201 gcattgcagg aaatcatcaa tcgccctggc ccggcgctga tccatgtgcg cattgatgcc
    37261 gaagaaaaag tttacccgat ggtgccgcca ggtgcggcga atactgaaat ggtgggggaa
    37321 taagccatgc aaaacacaac tcatgacaac gtgattctgg agctcaccgt tcgcaaccat
    37381 ccgggcgtaa tgacccacgt ttgtggcctt tttgcccgcc gcgcttttaa cgttgaaggc
    37441 attctttgtc tgccgattca ggacagcgac aaaagccata tctggctact ggtcaatgac
    37501 gaccagcgtc tggagcagat gataagccaa atcgataagc tggaagatgt ggtgaaagtg
    37561 cagcgtaatc agtccgatcc gactatgttt aacaagattg cggtgttttt tcagtaaccg
    37621 ctcaaggctt gaacaacatc gcgcttatcg ttaaggtaag cgcgtttttt tttacccgcc
    37681 aggacaagac catgatcacc gttgccctta tagacgatca cctcatcgtc cgctccggct
    37741 ttgcgcagct gctggggctg gaacctgatt tgcaggtagt tgccgagttt ggttcggggc
    37801 gcgaggcgct ggcggggctg ccggggcgcg gtgtgcaggt gtgtatttgc gatatctcca
    37861 tgcccgatat ctccggtctg gaactgctaa gccagctgcc gaaaggtatg gcgacaataa
    37921 tgctctctgt tcatgacagt ccggcgctgg ttgagcaggc gcttaacgcg ggggcacgcg
    37981 gctttctctc caaacgctgt agccctgacg aactgattgc ggcggtgcat acggttgcca
    38041 cgggcggctg ttatctgacg ccggatattg ccattaaact ggcatccggt cgtcaggacc
    38101 cgctaaccaa acgcgaacgg caggtggcgg aaaaactggc gcaaggaatg gcggtgaaag
    38161 agattgctgc cgaactgggc ttgtcaccga aaacggtaca cgtccatcgc gccaatctga
    38221 tggaaaaact gggcgtcagt aacgacgtag aactggcgcg ccgcatgttt gatggctggt
    38281 gatgaagacg ttgttctccc gcttaattac cgttattgcc tgctttttta tcttctctgc
    38341 cgcatggttt tgcctgtgga gtatcagcct gcacctggtt gagcgccctg atatggcggt
    38401 gctgttattt ccgtttggtc tgcggctagg gctaatgctg caatgcccgc gcggatactg
    38461 gcccgtattg ctgggtgcgg aatggctgct gatttactgg ctaacgcagg cggtcggttt
    38521 aacccatttt ccgttattga tgatcggtag tttactgacg ttactgcccg tagcgctgat
    38581 ctcgcgctat cgccatcagc gtgactggcg caccttgctg ttacaggggg cggcgttaac
    38641 ggcggcggcg ttgttgcagt cgctgccctg gctttggcac ggcaaagagt cgtggaatgc
    38701 gctgttgctg actttaactg gcggcctgac gctggccccg atatgtctgg tgttctggca
    38761 ctatctcgcc aataacacct ggctgccgct cggcccgtca ctggtttctc aaccgatcaa
    38821 ctggcgcggg cggcatctgg tctggtactt gctgttgttt gttattagtc tctggctcca
    38881 gttgggattg ccggacgaac tgtcgcgctt tacgccattc tgcctggcgc tgccgattat
    38941 cgcgctggcc tggcactacg gttggcaagg ggcgctgatc gcgacgttga tgaacgccat
    39001 cgcgctgatc gccagtcaaa cctggcgcga tcatccggtg gatttattgc tctcgctgct
    39061 ggtgcaaagt ctgacagggt tgttgcttgg cgctggcatc cagcggttgc gtgaacttaa
    39121 ccagtcgctg caaaaggaac tggcgcgcaa tcagcatctg gctgaacggt tgctggaaac
    39181 cgaagagagc gtgcgccgtg atgtggcgcg tgagctgcat gatgatatcg gtcagaccat
    39241 cacagccatt cgtactcagg cgggcattgt tcagcggctg gcggcagata acgccagcgt
    39301 gaagcagagc gggcagctca tcgaacaact gtcgctgggc gtgtacgacg cggtgcgccg
    39361 tttattagga cggttacgtc cgcgccagtt ggatgatctc tccctggagc aggccatccg
    39421 ctcactgatg cgggaaatgg agctggaagg gcgcggcatt gtcagccatc tcgaatggcg
    39481 aatcgatgaa tcagcattaa gtgaaaacca gcgcgtgacg ctgtttcgtg tctgccagga
    39541 agggctgaac aacattgtga aacatgctga tgccagcgcg gtcacgctgc aaggctggca
    39601 gcaggatgaa cggttgatgc tggtgattga agacgatggc agcggtttgc cgccgggttc
    39661 cgggcaacaa ggttttggcc tcaccggaat gcgcgagcgc gtaacggcgc tgggcggcac
    39721 attacacatt tcctgtctgc acggcacgcg tgtcagcgtt tctctacctc aacgctatgt
    39781 ctaaggttcg atgatgttgc cgtttctgaa agcgcctgcc gatgcgccat taatgactga
    39841 caaacatgaa attgatgccc gctatcgcta ctggcgtcgg catattctgc tgaccatctg
    39901 gctgggttac gcgctgtttt acttcacgcg taaaagtttt aacgccgccg taccagaaat
    39961 ccttgctaac ggcgtgctca gccgtagcga tatcggcctg ttagcgaccc tgttttacat
    40021 tacctacggc gtgtcgaagt ttgtctccgg cattgtcagc gatcgctcaa atgcccgtta
    40081 ttttatgggg atagggctta tcgccacggg catcatcaac attctgtttg gcttctcgac
    40141 gtcgctatgg gcgtttgccg tgctctgggt gctgaacgcc tttttccagg gctggggttc
    40201 accggtgtgt gcgcgtctgt taacggcctg gtattcacgt accgagcgcg gcggttggtg
    40261 ggcattatgg aacacggcgc ataacgtcgg cggcgcactc attcccattg tgatggcagc
    40321 ggctgcgctg cattacggct ggcgtgccgg gatgatgatt gctggttgta tggcgatagt
    40381 cgtggggatt tttctctgct ggcggctacg cgatcgcccg caggcgttag gtttaccggc
    40441 ggtcggtgaa tggcgacacg acgcgctgga aattgctcaa caacaagaag gggcagggtt
    40501 gacgcgtaaa gagatcctca ccaaatatgt gttgctgaat ccgtatatct ggctgctttc
    40561 gttttgctat gtgctggtct atgtggtccg ggcggcgatc aacgactggg gcaatttgta
    40621 tatgtccgag acactgggcg tcgatctggt cacggcgaat acggcagtga cgatgtttga
    40681 actgggcgga tttatcggtg cgctggtagc cggttggggc tcggacaaat tgtttaacgg
    40741 caaccgtggg ccgatgaatt tgattttcgc cgccggaatt ttgctttcag tcggctcgct
    40801 gtggctgatg ccatttgcca gctacgtgat gcaggcaacc tgcttcttca ccattggttt
    40861 ttttgtcttt ggcccgcaga tgttaatcgg catggcggcg gcagagtgtt cccacaaaga
    40921 ggcggcaggg gcggcgacgg ggtttgtcgg cttgtttgct tatctggggg cgtcgcttgc
    40981 tggttggccg ctggcgaaag tactcgatac ctggcactgg agcggatttt ttgtggttat
    41041 ctctatcgcc gccgggattt ccgcactgct gttactgccc tttttgaacg cccaggcacc
    41101 gcgcgaagcg tgatgcatct caccttttca cttcatatcc ggcaaaacta agaaattttc
    41161 caggttttgc ctggacgcta tctcaggcct gatttgctgc tgatttttac aatgcatgcc
    41221 tcacgcaggt attcatttca ggagtaaccc atgctggctt tcttaaacca ggttcgcaag
    41281 ccgaccctgg accttccgct cgaagtgcgg cgcaaaatgt ggttcaaacc gttcatgcaa
    41341 tcctacctgg tggtctttat cggctacctg acgatgtacc tgattcgcaa gaactttaac
    41401 atcgcgcaga acgacatgat ctcgacctac gggttgagca tgacgcagct ggggatgatc
    41461 ggcctgggtt tctccatcac ttatggcgtg ggtaaaacgc tggtttccta ctacgccgac
    41521 ggcaaaaaca ccaaacaatt cctgccgttc atgctgatcc tgtctgccat ttgtatgctg
    41581 ggcttcagtg ccagtatggg cagcggctcg gttagcctgt tcctgatgat tgccttctac
    41641 gccttaagcg gctttttcca gagtaccggc ggttcgtgca gttactccac catcaccaaa
    41701 tggacgccgc gtcgtaaacg cgggacattc ctcggtttct ggaatatttc tcacaacctt
    41761 ggcggtgcag gcgcagcagg tgtggcgctg ttcggggcaa attacctgtt cgatggccat
    41821 gtcatcggca tgtttatctt cccgtcgatt atcgcgctga ttgtcggttt tatcggcctg
    41881 cgttacggca gcgactcccc ggaatcttat ggcctcggca aagctgaaga actgttcggc
    41941 gaggagatca gcgaagagga caaagagaca gaatctaccg atatgaccaa gtggcagatc
    42001 tttgttgagt atgtgctgaa aaacaaagtg atctggctgc tgtgcttcgc caacattttc
    42061 ctctatgtgg tacgtattgg tatcgaccag tggtcaaccg tatacgcgtt ccaggaactg
    42121 aaactctcta aagcggtggc gattcagggc tttacgctgt ttgaagctgg tgcgctggtc
    42181 ggtacgctgc tgtggggctg gctctctgac ctggcgaacg gtcgccgtgg cctggtggcc
    42241 tgcatcgcgc tggcgctgat tatcgccacg ctcggtgtgt atcaacatgc cagcaacgaa
    42301 tatatctatc tggcttctct ctttgcgttg ggtttcctgg tctttggccc gcaattgttg
    42361 attggtgtgg ctgctgttgg ctttgtacct aaaaaagcga ttggcgctgc cgatggtatt
    42421 aaaggcacct ttgcttacct gattggtgac agctttgcca agttaggtct gggaatgatt
    42481 gccgatggga cgccggtatt cggccttacc ggctgggcag gcacattcgc cgcacttgat
    42541 atcgccgcga ttggttgtat ctgcctgatg gcgatagtgg cggtgatgga agaacgcaaa
    42601 atccgccgcg agaaaaaaat tcagcagttg acagtggcat aaacgtaact ggtgactttt
    42661 gcccggcatg acgccgggct tttttattat tccgtgactt ccagcgtagt gaaggcaaac
    42721 ttctcgccat caaatagccc ctgactggtt agttttagcg cggggatcac tggcagagaa
    42781 agaaacgcca tctgaataaa cggctcatcg ggtaacggac cgcattcacg ggcggcggct
    42841 ttcaaggcgt caatttgttc cgccagcgac tgcgccgtgt cggtgctcat caggccggca
    42901 atgggcaacg gcagatgact ttggacctgg ccgttacgta ccacgcacag cccgccgcca
    42961 tcctgaatca cctgattgac cgccagcgcc atctcttcgg cactgcgacc gatcaccaca
    43021 atattatggc tgtcatggct gaccgtcgca gccagcgcac cttcattcag tccaaagccg
    43081 ccaagcaaac cacaagccgg agccagccgt tgcccgtaac gctcaagtac ggcaataaag
    43141 ctcacatcat cgcgatcaaa accattttcg ctgtagacgc tggagtggga gtgcgtaatc
    43201 aattcgttat ggatgacgtc aatgacccga tagcgttttc cgggcgtaaa ttgcagggca
    43261 aagtcgctgg cggaaactgg ctggcgggca atggtgttgc catatggcgg agcggattgt
    43321 gccagtctcg ccgactcttc cgcctgtaag gtttgcgcat caatcggctc gcctttcacc
    43381 agtacctgct gcaccgtgac cttacgcgca tcgctcaaca ggacgatatc ggcctgcttg
    43441 ccgggtgcca gtaagccgag gtgattcaga ccaaagtggc gcgccgtcga ccagctggcg
    43501 acgcgatatg ccacatgcag cggcacattg tgttgttcga tcaggcggcg aattaaggca
    43561 tcgatgtgtc cttcatgggc gatctcccac gggttacggt catcggtaca gagcatgcat
    43621 tgcgggctgt taaattcgtt gatcaacggt gccagcgcgt tgagattgcg ggcagcggac
    43681 ccttcgcgga tcatcaacga catgccgagt tgtaatttcc ggcgtccttc ttccagctga
    43741 taactttcgt ggcagttttc aatacccgca gtaatatagg cgttaagttc tttaccaccc
    43801 aaacccgggc agtgaccgtc cagcgtcagg tggcgaaatg catccagttt atcgagcagc
    43861 gcattctgcc cgctaattac gccagggtag tccatcattt ctgcaaggcc ggtaacctgc
    43921 ggatggtccc gccaggcgag catctgttca agggtaaaac tggcaccgtt aacatcgcag
    43981 ccttccaggg cgggtacgca agagctgacc tgtaagtact ggttttgcct tgcctgttcg
    44041 gcacagcggg caaaccaggc gaatccggct tctcccatca cgttgacgat ttcatgaggg
    44101 tcgcaaataa cggtcgtcag gccgcgcggc agggtagcgg tttcaaaagt gaccggcgtc
    44161 atcatgctgg attcaatatg caggtgagca tcaataaacc ctggcaccgc cgttgcgccg
    44221 cgagcatcaa tccgctgcaa agccggagca tcagcgtatt ctgcgccaac accggcaatg
    44281 taacgtcctt taatcacaat tgggccggaa atttctccgc cattgatcag gtcgagaata
    44341 gagacattat caataatata atcggcaaca gcgtcgccac gggaaacggc taacaattcc
    44401 tggtattcag cccggctaat gtgatgaaat t
//
LOCUS       DAPGWB010000018        41937 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.018, whole genome shotgun sequence.
ACCESSION   DAPGWB010000018 DAPGWB010000000
VERSION     DAPGWB010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 41937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41937
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.018"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            322..1890
                     /gene="cydA"
                     /locus_tag="RHX79_001017"
     CDS             322..1890
                     /gene="cydA"
                     /locus_tag="RHX79_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415261.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDV2196221.1"
                     /translation="MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG
                     KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN
                     FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKR
                     SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD
                     QEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG
                     STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI
                     MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP
                     WAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR
                     YHFEQSSTTTQPAR"
     gene            1906..3045
                     /gene="cydB"
                     /locus_tag="RHX79_001018"
     CDS             1906..3045
                     /gene="cydB"
                     /locus_tag="RHX79_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDV2196222.1"
                     /translation="MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDT
                     ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV
                     GFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGN
                     FFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALA
                     GVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLP
                     LLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ
                     LTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY"
     gene            3060..3173
                     /gene="cydX"
                     /locus_tag="RHX79_001019"
     CDS             3060..3173
                     /gene="cydX"
                     /locus_tag="RHX79_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I oxidase subunit CydX"
                     /protein_id="HDV2196223.1"
                     /translation="MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI"
     gene            3173..3466
                     /gene="ybgE"
                     /locus_tag="RHX79_001020"
     CDS             3173..3466
                     /gene="ybgE"
                     /locus_tag="RHX79_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HDV2196224.1"
                     /translation="MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTS
                     ELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF"
     gene            3616..4020
                     /gene="ybgC"
                     /locus_tag="RHX79_001021"
     CDS             3616..4020
                     /gene="ybgC"
                     /locus_tag="RHX79_001021"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HDV2196225.1"
                     /translation="MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH
                     FSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENT
                     LLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ"
     gene            4017..4709
                     /gene="tolQ"
                     /locus_tag="RHX79_001022"
     CDS             4017..4709
                     /gene="tolQ"
                     /locus_tag="RHX79_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolQ"
                     /protein_id="HDV2196226.1"
                     /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA
                     AAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPE
                     AVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK
                     QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH
                     RQAFTVSESNKG"
     gene            4713..5141
                     /gene="tolR"
                     /locus_tag="RHX79_001023"
     CDS             4713..5141
                     /gene="tolR"
                     /locus_tag="RHX79_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HDV2196227.1"
                     /translation="MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVE
                     VDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKAN
                     PKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI"
     gene            5206..6471
                     /gene="tolA"
                     /locus_tag="RHX79_001024"
     CDS             5206..6471
                     /gene="tolA"
                     /locus_tag="RHX79_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HDV2196228.1"
                     /translation="MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGG
                     GGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQER
                     LKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAA
                     KKAAADAKKKAEAEAAKAAAEAQKKAEAAAAALKKKAEAAEAAAAEARKKAATEAAEK
                     AKAEAEKKAAAEKAAADKKAAAEKAAADKKAAEKAAAEKAAADKKAAAEKAAADKKAA
                     AAKAAAEKAAAAKAAAEADDIFGELSSGKNAPKTGGGAKGNNASPAGSGNTKNNGASG
                     ADINNYAGQIKSAIESKFYDASSYAGKTCTLRIKLAPDGMLLDIKPEGGDPALCQAAL
                     AAAKLAKIPKPPSQAVYEVFKNAPLDFKP"
     gene            6604..7896
                     /gene="tolB"
                     /locus_tag="RHX79_001025"
     CDS             6604..7896
                     /gene="tolB"
                     /locus_tag="RHX79_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001646851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDV2196229.1"
                     /translation="MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQW
                     AGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVG
                     QVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK
                     GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVT
                     FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA
                     SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQN
                     QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS
                     SSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL"
     gene            7931..8452
                     /gene="pal"
                     /locus_tag="RHX79_001026"
     CDS             7931..8452
                     /gene="pal"
                     /locus_tag="RHX79_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HDV2196230.1"
                     /translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMD
                     ANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYK
                     VTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDE
                     AAYSKNRRAVLVY"
     gene            8462..9253
                     /gene="cpoB"
                     /locus_tag="RHX79_001027"
     CDS             8462..9253
                     /gene="cpoB"
                     /locus_tag="RHX79_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein CpoB"
                     /protein_id="HDV2196231.1"
                     /translation="MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQ
                     LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS
                     SGGAAAQSTSSDQSGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQD
                     DAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAAD
                     AMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM"
     gene            9418..9493
                     /locus_tag="RHX79_001028"
     tRNA            9418..9493
                     /locus_tag="RHX79_001028"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9451..9453,aa:Lys,seq:ttt)
     gene            9629..9704
                     /locus_tag="RHX79_001029"
     tRNA            9629..9704
                     /locus_tag="RHX79_001029"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9662..9664,aa:Val,seq:tac)
     gene            9707..9782
                     /locus_tag="RHX79_001030"
     tRNA            9707..9782
                     /locus_tag="RHX79_001030"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9740..9742,aa:Lys,seq:ttt)
     gene            9932..10007
                     /locus_tag="RHX79_001031"
     tRNA            9932..10007
                     /locus_tag="RHX79_001031"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9965..9967,aa:Val,seq:tac)
     gene            10011..10086
                     /locus_tag="RHX79_001032"
     tRNA            10011..10086
                     /locus_tag="RHX79_001032"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10044..10046,aa:Lys,seq:ttt)
     gene            10233..10308
                     /locus_tag="RHX79_001033"
     tRNA            10233..10308
                     /locus_tag="RHX79_001033"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10266..10268,aa:Lys,seq:ttt)
     gene            10342..10417
                     /locus_tag="RHX79_001034"
     tRNA            10342..10417
                     /locus_tag="RHX79_001034"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10375..10377,aa:Lys,seq:ttt)
     gene            10448..10573
                     /locus_tag="RHX79_001035"
     ncRNA           10448..10573
                     /ncRNA_class="other"
                     /locus_tag="RHX79_001035"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            10822..11865
                     /gene="nadA"
                     /locus_tag="RHX79_001036"
     CDS             10822..11865
                     /gene="nadA"
                     /locus_tag="RHX79_001036"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HDV2196232.1"
                     /translation="MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVM
                     VAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEK
                     TILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAV
                     ELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEY
                     PDAAILVHPESPQAIVDMADAVGSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPD
                     KELLEAPTAGEGATCRSCAHCPWMAMNGLQSIAEALEQEGSNHEVHVDERLRERALVP
                     LNRMLDFAATLRG"
     gene            11903..12622
                     /gene="pnuC"
                     /locus_tag="RHX79_001037"
     CDS             11903..12622
                     /gene="pnuC"
                     /locus_tag="RHX79_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HDV2196233.1"
                     /translation="MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEK
                     ISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIR
                     WLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFP
                     FWDSCMMVLSIVAMILMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIA
                     LNGSRMWINSARERGSRALSH"
     gene            complement(12619..13560)
                     /gene="zitB"
                     /locus_tag="RHX79_001038"
     CDS             complement(12619..13560)
                     /gene="zitB"
                     /locus_tag="RHX79_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc transporter ZitB"
                     /protein_id="HDV2196234.1"
                     /translation="MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGS
                     LALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVIT
                     ILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV
                     LGDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPV
                     SLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYL
                     MDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH"
     gene            complement(13674..14054)
                     /locus_tag="RHX79_001039"
     CDS             complement(13674..14054)
                     /locus_tag="RHX79_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgS-like family protein"
                     /protein_id="HDV2196235.1"
                     /translation="MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQ
                     VAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPD
                     INKKVQTGDGINNDVDTKTDGTTQ"
     gene            14370..15422
                     /gene="aroG"
                     /locus_tag="RHX79_001040"
     CDS             14370..15422
                     /gene="aroG"
                     /locus_tag="RHX79_001040"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HDV2196236.1"
                     /translation="MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIH
                     KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV
                     GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS
                     AIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFK
                     KQMDVCADVCQQIAGGETAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDT
                     DALLRQLANAVKARRG"
     gene            complement(15581..16333)
                     /gene="gpmA"
                     /locus_tag="RHX79_001041"
     CDS             complement(15581..16333)
                     /gene="gpmA"
                     /locus_tag="RHX79_001041"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HDV2196237.1"
                     /translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL
                     LKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE
                     TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR
                     VIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEF
                     DENFKPLKRYYLGNADEIAAKAAAVANQGKAK"
     gene            complement(16538..17578)
                     /gene="galM"
                     /locus_tag="RHX79_001042"
     CDS             complement(16538..17578)
                     /gene="galM"
                     /locus_tag="RHX79_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HDV2196238.1"
                     /translation="MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPL
                     SDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQ
                     LHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITY
                     RATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGT
                     SFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYT
                     TAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEE
                     YSSLTEYQFIAE"
     gene            complement(17572..18720)
                     /gene="galK"
                     /locus_tag="RHX79_001043"
     CDS             complement(17572..18720)
                     /gene="galK"
                     /locus_tag="RHX79_001043"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HDV2196239.1"
                     /translation="MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVL
                     PCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLDAPIVAHENYQWANYVRGVVKH
                     LQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQE
                     AENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL
                     VGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTV
                     EAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGG
                     GFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC"
     gene            complement(18724..19770)
                     /gene="galT"
                     /locus_tag="RHX79_001044"
     CDS             complement(18724..19770)
                     /gene="galT"
                     /locus_tag="RHX79_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HDV2196240.1"
                     /translation="MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQV
                     LPAHDPDCFLCAGNVRVTGDKNPDYTRTYVFTNDFAALMSDTPDAPESNDPLMRCQSA
                     RGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGC
                     SNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH
                     WLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPY
                     SMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER
                     LRAVSDIHFRESGV"
     gene            complement(19780..20796)
                     /gene="galE"
                     /locus_tag="RHX79_001045"
     CDS             complement(19780..20796)
                     /gene="galE"
                     /locus_tag="RHX79_001045"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308814.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDV2196241.1"
                     /translation="MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI
                     ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVN
                     GTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL
                     TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF
                     GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGSSVLDVVNAF
                     SKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ
                     GYPD"
     gene            complement(21058..22530)
                     /gene="modF"
                     /locus_tag="RHX79_001046"
     CDS             complement(21058..22530)
                     /gene="modF"
                     /locus_tag="RHX79_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HDV2196242.1"
                     /translation="MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSA
                     LARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTT
                     AEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILD
                     EPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGA
                     KEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPIL
                     NNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDI
                     KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDK
                     RTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISE
                     GETQLLFVSHHAEDAPACITHRLEFVSDGDLYRYALTKIN"
     gene            complement(22598..23386)
                     /gene="modE"
                     /locus_tag="RHX79_001047"
     CDS             complement(22598..23386)
                     /gene="modE"
                     /locus_tag="RHX79_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-dependent transcriptional regulator"
                     /protein_id="HDV2196243.1"
                     /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS
                     YKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDV
                     LSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKV
                     AITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCE
                     VLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC"
     gene            23515..23664
                     /gene="acrZ"
                     /locus_tag="RHX79_001048"
     CDS             23515..23664
                     /gene="acrZ"
                     /locus_tag="RHX79_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux pump accessory protein AcrZ"
                     /protein_id="HDV2196244.1"
                     /translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQ
                     PGQNH"
     gene            23831..24604
                     /gene="modA"
                     /locus_tag="RHX79_001049"
     CDS             23831..24604
                     /gene="modA"
                     /locus_tag="RHX79_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV2196245.1"
                     /translation="MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDI
                     ATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQ
                     TLLGNSLVVVAPKASEQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKL
                     GAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKV
                     EYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK"
     gene            24604..25293
                     /gene="modB"
                     /locus_tag="RHX79_001050"
     CDS             24604..25293
                     /gene="modB"
                     /locus_tag="RHX79_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDV2196246.1"
                     /translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGK
                     ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVM
                     SFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITIPLTLPGIIVGTVLAFARS
                     LGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEW
                     LARISRERAGR"
     gene            25296..26354
                     /gene="modC"
                     /locus_tag="RHX79_001051"
     CDS             25296..26354
                     /gene="modC"
                     /locus_tag="RHX79_001051"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HDV2196247.1"
                     /translation="MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAI
                     SGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMA
                     KSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD
                     IPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWG
                     SSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQ
                     ASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELV
                     IKPGLWLYAQIKSVSITA"
     gene            complement(26355..27173)
                     /gene="ybhA"
                     /locus_tag="RHX79_001052"
     CDS             complement(26355..27173)
                     /gene="ybhA"
                     /locus_tag="RHX79_001052"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyridoxal
                     phosphate/fructose-1,6-bisphosphate phosphatase"
                     /protein_id="HDV2196248.1"
                     /translation="MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTG
                     RHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHI
                     HGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL
                     THDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENV
                     VAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI"
     gene            27328..28323
                     /gene="pgl"
                     /locus_tag="RHX79_001053"
     CDS             27328..28323
                     /gene="pgl"
                     /locus_tag="RHX79_001053"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HDV2196249.1"
                     /translation="MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS
                     PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYN
                     AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG
                     HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL
                     DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ
                     PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH"
     gene            complement(28364..29317)
                     /locus_tag="RHX79_001054"
     CDS             complement(28364..29317)
                     /locus_tag="RHX79_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308823.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2196250.1"
                     /translation="MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEED
                     LHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPT
                     AVFYFLPLAIGKFNELYPNIRVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFT
                     PLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLD
                     WFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKD
                     AVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG"
     gene            29501..30553
                     /locus_tag="RHX79_001055"
     CDS             29501..30553
                     /locus_tag="RHX79_001055"
                     /EC_number="5.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalomesaconate tautomerase"
                     /protein_id="HDV2196251.1"
                     /translation="MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGND
                     LEIDGIGGGNPLTSKVAIISRSNDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGA
                     FAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVA
                     LTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELD
                     ADKALLARIESIRLQASKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRA
                     LAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRAS
                     VIRTTRKIFSGEVYLP"
     gene            30629..32062
                     /locus_tag="RHX79_001056"
     CDS             30629..32062
                     /locus_tag="RHX79_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV2196252.1"
                     /translation="MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIV
                     GLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAA
                     FVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSV
                     AVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISW
                     GGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLG
                     VFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGII
                     GLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAML
                     PVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGA
                     VLTILTFLVHITLGVWWWNMLIGWNML"
     gene            32245..34506
                     /locus_tag="RHX79_001057"
     CDS             32245..34506
                     /locus_tag="RHX79_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415292.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydratase"
                     /protein_id="HDV2196253.1"
                     /translation="MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSS
                     HNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGT
                     INGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
                     AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVK
                     NKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQL
                     NPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAH
                     GKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPS
                     SQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREG
                     SKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQG
                     FVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRS
                     NPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPL
                     QTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQM
                     AEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIK
                     AGSLINFNKNRQM"
     gene            complement(34648..35931)
                     /locus_tag="RHX79_001058"
     CDS             complement(34648..35931)
                     /locus_tag="RHX79_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative acyl-CoA thioester hydrolase"
                     /protein_id="HDV2196254.1"
                     /translation="MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPI
                     LSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVD
                     AAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPA
                     DWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENT
                     LGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVT
                     NSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFN
                     AFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVD
                     DNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK"
     gene            complement(36083..36559)
                     /locus_tag="RHX79_001059"
     CDS             complement(36083..36559)
                     /locus_tag="RHX79_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase inhibitor"
                     /protein_id="HDV2196255.1"
                     /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTK
                     SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTG
                     YDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS"
     gene            complement(36617..37906)
                     /gene="bioA"
                     /locus_tag="RHX79_001060"
     CDS             complement(36617..37906)
                     /gene="bioA"
                     /locus_tag="RHX79_001060"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDV2196256.1"
                     /translation="MTTDDIAFDQRHIWHPYTSMTSPLPVYPVASAEGCELILSDGRR
                     LVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHTPAIELCRKLVAMTPQP
                     LECVFLADSGSVAVEVSMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNS
                     MHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAG
                     GMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKAL
                     TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQ
                     QVADIEVQLREQLAPARNAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRP
                     FGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ"
     gene            37993..39033
                     /gene="bioB"
                     /locus_tag="RHX79_001061"
     CDS             37993..39033
                     /gene="bioB"
                     /locus_tag="RHX79_001061"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HDV2196257.1"
                     /translation="MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVST
                     LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW
                     KNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEF
                     YGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPES
                     VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC
                     FMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMT
                     PDTDEYYNAAAL"
     gene            39030..40184
                     /gene="bioF"
                     /locus_tag="RHX79_001062"
     CDS             39030..40184
                     /gene="bioF"
                     /locus_tag="RHX79_001062"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HDV2196258.1"
                     /translation="MSWQEKINAALAARRTTDALRRRYPVTQGAGRWLVADDRQYLNF
                     SSNDYLGLSHHPHIIRAWQQGAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRA
                     LLFISGFAANQAVITAMMAKEDRIVADRLSHASLLEAASLSPAQLRRFAHNDVTHLAR
                     LLAASCPGQQLVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRG
                     SCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQAL
                     RASLAVIRSEEGDARREKLAALITRFRAGVQGSPFTLADSRSAIQPLIVGDNSRALQL
                     AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEMLHGNG"
     gene            40171..40926
                     /gene="bioC"
                     /locus_tag="RHX79_001063"
     CDS             40171..40926
                     /gene="bioC"
                     /locus_tag="RHX79_001063"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDV2196259.1"
                     /translation="MATVNKQAIAAAFGRAAAHYEQHADLQRQSADVLLAMLPQRKYT
                     HVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATA
                     TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERP
                     HANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRIL
                     TRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE"
     gene            40919..41596
                     /gene="bioD"
                     /locus_tag="RHX79_001064"
     CDS             40919..41596
                     /gene="bioD"
                     /locus_tag="RHX79_001064"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706656.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HDV2196260.1"
                     /translation="MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGS
                     EKTPEGLRNSDALALQHNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAG
                     LRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA
                     QAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGK
                     YINLALL"
BASE COUNT        10062 a        10389 c        11199 g        10287 t
ORIGIN      
        1 gaaatgggca tcaaaaagag ataaattgtt ctcgatcaaa ttggctgaaa ggcggtaatt
       61 tagctataaa ttgatcaccg tcgaaaaatg caaatttgct tcaacaaaaa cctgtttatt
      121 gtaaggattt tgcggcgtaa tatatacgtg ggatcaattt gagtttttat taacatgttt
      181 gcaacctttc tttacgccgt ttttgtgtgc attcacatgg tatgatgaaa gtgttcaaac
      241 aaatttctat tggggcatgc gtgtgaccct ttctaacggg gttcactctc ggagtcttca
      301 tgcgatgagc aaggagtcat gatgttagat atagtcgaac tgtcgcgctt acagtttgcc
      361 ttgaccgcga tgtaccactt cctttttgtg ccactgacgc tcggtatggc gttcctgctg
      421 gccattatgg aaacggtcta cgtcctctcc ggcaaacaga tttataaaga tatgaccaag
      481 ttctggggca agttgtttgg tatcaacttc gctctgggtg tggctaccgg tctgaccatg
      541 gagttccagt tcgggactaa ctggtcttac tattcccact atgtagggga tatcttcggt
      601 gcgccgctgg caatcgaagg tctgatggcc ttcttcctcg aatccacctt tgtaggtctg
      661 ttcttcttcg gttgggatcg tctgggtaaa gttcagcata tgtgtgtcac ctggctggtg
      721 gcgctcggtt caaacctgtc cgcactgtgg attctggttg cgaacggctg gatgcaaaac
      781 ccaatcgcgt ccgatttcaa ctttgaaact atgcgtatgg agatggtgag cttctccgag
      841 ctggtgctta acccggttgc tcaggtgaaa ttcgttcaca ctgtagcgtc tggttatgtg
      901 actggcgcga tgttcatcct cggtatcagc gcatggtata tgctgaaagg tcgtgacttc
      961 gccttcgcta aacgctcctt tgctatcgct gccagcttcg gtatggctgc tgttctgtct
     1021 gttattgttc tgggtgatga atccggctac gaaatgggcg acgtgcagaa aaccaaactg
     1081 gctgctattg aagccgagtg ggaaacgcaa cctgcgcctg ctgcctttac tctgttcggc
     1141 attcctgatc aggaagagga gacgaacaaa tttgcgattc agatccctta cgcactgggc
     1201 atcattgcaa cgcgttccgt ggataccccg gttatcggcc tgaaagagct gatggtgcag
     1261 catgaagaac gcattcgtaa cgggatgaag gcgtactctc tgctcgaaca actgcgttct
     1321 ggttctaccg accaggcggt tcgtgaccag ttcaatagca tgaagaaaga cctcggttac
     1381 ggtctgctgc tgaaacgcta tacgccaaac gtggctgatg cgactgaagc gcagattcaa
     1441 caggcaacca aagactccat cccgcgtgta gcgccgctgt actttgcgtt ccgtatcatg
     1501 gtggcgtgtg gcttcctgct gctggcaatc atcgcgctct ctttctggag tgtcatccgc
     1561 aaccgcattg gcgagaaaaa atggcttctg cgcgccgcgc tgtacggtat tccgctgccg
     1621 tggattgctg tagaagcggg ctggttcgtg gctgaatatg gccgccaacc gtgggctatc
     1681 ggtgaagtgc tgccgacagc tgtggcgaac tcgtcactga ccgcaggcga tctcatcttc
     1741 tcaatggtgc tgatttgcgg cctgtatacc ctgttcctgg tggcagaatt gttcttaatg
     1801 ttcaaatttg cacgcctcgg cccaagcagc ctgaaaaccg gtcgctatca ctttgagcag
     1861 tcttccacga ctactcagcc ggcacgctaa gacaggagtc gtcaaatgat cgattatgaa
     1921 gtattgcgtt ttatctggtg gctgctggtt ggcgttctgc tgattggttt tgcagtcact
     1981 gacggtttcg acatgggggt gggcatgctc acccgtttcc tcggtcgtaa cgacaccgag
     2041 cgtcgaatta tgattaactc cattgcacca cactgggacg gtaaccaggt ttggctgatc
     2101 accgcgggcg gcgcactctt tgctgcctgg ccgatggtct atgccgctgc gttctccggc
     2161 ttctatgtgg cgatgatcct cgtgctggcg tctttgttct tccgtccggt cggttttgac
     2221 taccgctcca agattgaaga aacccgctgg cgtaacatgt gggactgggg catcttcatt
     2281 ggtagcttcg ttccgccgct ggtaattggt gtagcgttcg gtaacctgtt gcagggcgta
     2341 ccgttcaacg ttgatgaata tctgcgtctg tactacaccg gtaacttctt ccagttgctt
     2401 aacccgttcg gcctgctggc aggcgtggtg agcgtaggga tgatcattac tcagggcgca
     2461 acctatctgc aaatgcgtac cgtgggcgaa ctgcacctgc gtacccgtgc aacggctcag
     2521 gtggctgcgc tggtgacact ggtctgtttc gcactggctg gcgtatgggt gatgtacggt
     2581 atcgatggtt atgtcgtgaa atcgacaatg gaccattacg cagcctctaa cccactgaat
     2641 aaagaagtgg ttcgtgaagc tggcgcatgg ctggttaact tcaacaacac gccaattctg
     2701 tgggctattc cggcgctggg tgtggttctg ccgctgctga ccatcctgac tgcacgtatg
     2761 gataaagccg cgtgggcgtt tgtgttctcc tccctgacgc tggcctgcat catcctgaca
     2821 gccggtatcg caatgttccc gtttgtgatg ccgtccagca ccatgatgaa cgcaagtctg
     2881 acaatgtggg atgcaacttc cagccagctg acgcttaacg tcatgacctg ggttgcggtg
     2941 gttctggtac cgatcattct gctctacacc gcctggtgtt actggaaaat gttcggtcgt
     3001 atcaccaaag aagatattga acgtaacacc cactctctgt actaagtaag gagctaaaaa
     3061 tgtggtattt cgcatggatt ctgggaacgc ttcttgcctg ttcgtttggg gtaatcaccg
     3121 cgctggcgct tgaacacgtc gaatcaggca aagccggtca agaagacatc tgatgagtaa
     3181 gattatcgcg actttgtatg cggtaatgga caagcgcccc ctgcgggcgc tttccttcgt
     3241 gatggcgctt ctgttagcag gatgtatgtt ttgggaccca tctcgttttg ccgcgaagac
     3301 cagtgaactg gaaatctggc atggtttatt gctgatgtgg gccgtctgtg ctggtgtgat
     3361 tcacggcgtg ggctttcgtc cgcagaaggt tctttggcaa gggatttttt gcccattgct
     3421 tgccgatatt gttctcattg tcgggctgat tttcttcttc ttttaaatca gaattctctt
     3481 taaaaaatta tgggccgctc caggcccata aatttttacg ctcccttaac ttgccctcat
     3541 tcccaaacct caatcgcgcg cgtatagtag cagcgtttaa aagctctaac ttttgttgca
     3601 ttaccgggat gtaaagtgaa tacaacgctg tttcgatggc cggttcgcgt ctactatgaa
     3661 gataccgatg ccggtggtgt ggtgtaccac gccagttacg tcgcttttta tgaaagagca
     3721 cgcacagaga tgctgcgtca tcatcacttc agtcagcagg cgctgatggc tgaacgcgtt
     3781 gcctttgtgg tacgtaaaat gacggtggaa tattacgcac ctgcgcggct cgacgatatg
     3841 ctcgaaatac agactgaaat aacatcaatg cgtggcacct ctttggtttt cacgcaacgt
     3901 attgtcaacg ccgagaatac tttgctgaat gaagcagagg ttctggttgt ttgcgttgac
     3961 ccactcaaaa tgaagcctcg tgcgcttccc aagtctattg tcgcggagtt taagcagtga
     4021 ctgacatgaa tatccttgat ttgttcctga aggctagcct tctggttaaa cttatcatgt
     4081 tgattttgat tggtttttca atcgcatctt gggccattat tatccagcgg acccgtattc
     4141 ttaacgcagc ggcgcgcgaa gccgaagcgt ttgaagataa attctggtct ggaatcgaac
     4201 tctctcgcct ctatcaagag agccagggga aacgggataa tctgactggt tcggaacaaa
     4261 tcttttacag cgggttcaaa gagtttgtgc gcctgcatcg tgccaatagc catgcgccgg
     4321 aagccgtagt ggaaggggcg tcgcgtgcta tgcgtatctc catgaaccgt gaacttgaaa
     4381 atctggaaac gcacattccg ttcctcggta cggttggctc catcagcccg tatattggtc
     4441 tgtttggtac ggtctggggg atcatgcacg cctttatcgc cctcggggcg gtaaaacaag
     4501 caacactgca aatggttgcg cccggtatcg cagaagcgtt gattgcgact gcaattggtc
     4561 tgttcgccgc aattccggcg gtaatggctt ataaccgcct caaccagcgc gtaaacaaac
     4621 tggaactgaa ttacgacaac tttatggaag agtttaccgc gattctgcac cgccaggcgt
     4681 ttaccgttag cgagagcaac aaggggtaag ccatggccag agcgcgtgga cgaggtcgtc
     4741 gcgatctcaa gtccgaaatc aacattgtac cgttgctgga cgtactgctg gtgctgttgc
     4801 tgatctttat ggcgacagcg cccatcatca cccagagcgt ggaggtcgat ctgccagacg
     4861 ctactgaatc acaggcggtg agcagtaacg ataatccgcc agtgattgtt gaagtgtctg
     4921 gtattggtca gtacaccgtg gtggttgaga aagatcgcct ggagcgttta ccaccagagc
     4981 aggtggtggc ggaagtgtcc agccgtttca aggccaaccc gaaaacggtc tttctgatcg
     5041 gtggcgcaaa agatgtgcct tacgatgaaa taattaaagc actgaacttg ttacatagtg
     5101 cgggtgtgaa atcggttggt ttaatgacgc agcctatcta aacatctgcg tttcccttgc
     5161 ttgaaagaga gcgggtaaca ggcgaacagt ttttggaaac cgagagtgtc aaaggcaacc
     5221 gaacaaaacg acaagctcaa gcgggcgata attatttcag cagtgctgca tgtcatctta
     5281 tttgcggcgc tgatctggag ttcgttcgat gagaatatag aagcttcagc cggaggcggc
     5341 ggtggttcgt ccatcgacgc tgtcatggtt gattcaggtg cggtagttga gcagtacaaa
     5401 cgcatgcaaa gccaggaatc aagcgcgaag cgttctgatg aacagcgcaa gatgaaggaa
     5461 cagcaggctg ctgaagaact gcgtgagaaa caagcggctg aacaggaacg cctgaagcaa
     5521 cttgagaaag agcggttagc ggctcaggag cagaaaaagc aggctgaaga agccgcaaaa
     5581 caggccgagt taaagcagaa gcaagctgaa gaggcggcag cgaaagcggc ggcagatgct
     5641 aaagcgaagg ccgaagcaga tgctaaagct gcggaagaag cagcgaagaa agcggctgca
     5701 gacgcaaaga aaaaagcaga agcagaagcc gccaaagccg cagccgaagc gcagaaaaaa
     5761 gccgaggcag ccgctgcggc actgaagaag aaagcggaag cggcagaagc agctgcagct
     5821 gaagcaagaa agaaagcggc aactgaagct gctgaaaaag ccaaagcaga agctgagaag
     5881 aaagcggctg ctgaaaaggc tgcagctgat aagaaagcgg cagcagagaa agctgcagcc
     5941 gacaaaaaag cagcagaaaa agcggctgct gaaaaggcag cagctgataa gaaagcagcg
     6001 gcagaaaaag ccgccgcaga caaaaaagcg gcagcggcaa aagctgcagc tgaaaaagcc
     6061 gctgcagcaa aagcggccgc agaggcagat gatattttcg gtgagctaag ctctggtaag
     6121 aatgcaccga aaacgggggg aggggcgaaa gggaacaatg cttcgcctgc cgggagtggt
     6181 aatactaaaa acaatggcgc atcaggggcc gatatcaata actatgccgg gcagattaaa
     6241 tctgctatcg aaagtaagtt ctatgacgca tcgtcctatg caggcaaaac ctgtacgctg
     6301 cgcataaaac tggcacccga tggtatgtta ctggatatca aacctgaagg tggcgatccc
     6361 gcactttgtc aggctgcgtt ggcagcagct aaacttgcga agatcccgaa accaccaagc
     6421 caggcagtat atgaagtgtt caaaaacgcg ccattggact tcaaaccgta atcgcgatgt
     6481 tgactgttcg gacggtcaac atcaggcacc ggttgccacg gggttctggt agttttgtgt
     6541 attttagttt gttaacattc tgctaaatta tcgtgggcca tcggtccaga taagggagat
     6601 atgatgaagc aggcattacg agtagcattt ggttttctca tactgtgggc atcagttctg
     6661 catgctgaag tccgcattgt gatcgacagc ggtgtagatt ccggtcgtcc tattggtgtt
     6721 gttcctttcc agtgggcggg gcctggtgcg gcacctgaag atattggcgg catcgttgct
     6781 gctgacttgc gtaacagcgg taaatttaat ccgttagatc gcgctcgtct gccacagcag
     6841 ccgggtagtg cgcaggaagt acaaccagct gcatggtccg cactgggcat tgacgctgta
     6901 gttgtcggtc aggtcactcc gaatccggat ggttcttaca atgttgctta tcaacttgtt
     6961 gacactggcg gcgcaccggg tactgtactt gctcagaact cgtacaaagt gaacaagcag
     7021 tggctgcgtt atgctggtca taccgccagt gatgaagtgt ttgaaaaact taccggcatt
     7081 aaaggtgcgt tccgtactcg tattgcctac gttgttcaga ccaacggcgg tcagttcccg
     7141 tatgaactgc gcgtatctga ctatgacggt tacaaccagt ttgtcgttca ccgttcaccg
     7201 cagccgctga tgtctccggc gtggtcacca gacggttcta aactggctta tgtgaccttc
     7261 gaaagcggtc gttccgcgct ggttattcag acgctggcaa atggcgctgt acgtcaggtg
     7321 gcttcattcc cgcgtcacaa cggtgcacct gcattctcgc cagacggcag caaactggca
     7381 ttcgccttgt cgaaaaccgg tagtctgaac ctgtacgtaa tggatttggc ttctggtcag
     7441 atccgccagg tgactgatgg tcgcagtaac aataccgaac cgacctggtt cccggatagc
     7501 cagaacctgg catttacttc tgaccaggcc ggtcgtccgc aggtttataa agtgaatatc
     7561 aacggcggtg cgccacaacg tattacctgg gaaggttcgc agaaccagga tgcggatgtc
     7621 agcagcgacg gtaaatttat ggtaatggtc agctccaatg gtgggcagca gcacattgcc
     7681 aaacaagatc tggcaacggg aggcgtacaa gttctgtcgt ccacgttcct ggatgaaacg
     7741 ccaagtctgg cacctaacgg cactatggta atctacagct cttctcaggg gatgggatcc
     7801 gtgctgaatt tggtttctac agatgggcgt ttcaaagcgc gtcttccggc aactgatgga
     7861 caggtcaaat tccctgcctg gtcgccgtat ctgtgataat aattaattga atagtaaagg
     7921 aatcattgaa atgcaactga acaaagtgct gaaagggctg atgattgctc tgcctgttat
     7981 ggcaattgcg gcatgttctt ccaacaagaa cgccagcaat gacggcagcg aaggcatgct
     8041 gggtgccggc actggtatgg atgcgaacgg cggcaacggc aacatgtctt ccgaagagca
     8101 ggctcgtctg caaatgcaac agctgcagca gaacaacatc gtttacttcg atctggacaa
     8161 gtacgatatc cgttctgact tcgctcaaat gctggatgca catgcaaact tcctgcgtag
     8221 caacccgtct tacaaagtca ccgtagaagg tcacgcggac gaacgtggta ctccggaata
     8281 caacatctcc ctgggtgaac gtcgtgcgaa cgccgttaag atgtacctgc agggtaaagg
     8341 cgtttctgca gaccagatct ccatcgtttc ttacggtaaa gaaaaacctg cagtactggg
     8401 tcatgacgaa gcggcatact ccaaaaaccg tcgtgcggta ctggtttact aagagaattg
     8461 catgagcagt aacttcagac atcaactatt gagtctgtcg ttactggttg gtatagcggc
     8521 cccctgggcc gcttttgctc aggcaccaat cagtagtgtc ggctcaggct cggtcgaaga
     8581 ccgcgtcact caacttgagc gtatttctaa tgctcacagc cagcttttaa cccaactcca
     8641 gcaacaactt tctgataatc aatccgatat tgattccctg cgtggtcaga ttcaggaaaa
     8701 tcagtatcaa ctgaatcagg tcgtggagcg gcaaaagcag atcctgttgc agatcgacag
     8761 cctcagcagc ggtggtgcag cggcgcaatc aaccagcagc gatcaaagcg gtgcggcggc
     8821 atcaacgacg ccgacagctg atgctggtac tgcgaatgct ggcgcgccgg tgaaaagcgg
     8881 cgatgcaaac acggattaca atgcagctat tgcgctggtg caggataaat cccgccagga
     8941 tgacgcaatg gtggcatttc agaatttcat caaaaattac cctgattcaa cttacctgcc
     9001 aaacgccaat tattggctgg gtcagttaaa ctacaacaag ggtaaaaaag atgatgcggc
     9061 gtactatttt gcttcggtag tgaaaaacta tccgaagtca ccaaaggctg ctgatgcgat
     9121 gtttaaagtc ggcgtcatca tgcaggacaa aggtgacacc gcaaaagcga aagccgtata
     9181 ccagcaggtt atcagtaaat accctggtac tgatggcgct aaacaggcac aaaaacgtct
     9241 gaacgcgatg taatgcataa cacacgacca gaagtcgcat tatttctggt cgtgtcgtgc
     9301 gaatcataag cagttgagtg atctgcatcg aaatttttgt tgcgctcaag tctgaaatca
     9361 gtaatatatg ccgccgttgc cacgggatat caaacaaacc gaaagcaacg aaaaagtggg
     9421 tcgttagctc agttggtaga gcagttgact tttaatcaat tggtcgcagg ttcgaatcct
     9481 gcacgaccca ccaatcgcta aggtggaagc ggtagtaaaa cgtgaaggat aacgttgcat
     9541 cagcaacggc ccgaagggcg agacgaagtc gagtcatcct gcacgaccca ccactaacat
     9601 agttagttgt agtatccagc gtagtattgg gtgattagct cagctgggag agcacctccc
     9661 ttacaaggag ggggtcggcg gttcgatccc gtcatcaccc accaccgggt cgttagctca
     9721 gttggtagag cagttgactt ttaatcaatt ggtcgcaggt tcgaatcctg cacgacccac
     9781 cagttttagc atcgaagaca gatgttaagc gtgtaggata acgttgcgtc agcaacggcc
     9841 cgtagggcga gcgaagcgag tcatcctgca cgacccacca ctaattacgg tgggttcggt
     9901 ggaagtagtt tgtagtatcc agcgcagtat cgggtgatta gctcagctgg gagagcacct
     9961 cccttacaag gagggggtcg gcggttcgat cccgtcatca cccaccactc gggtcgttag
    10021 ctcagttggt agagcagttg acttttaatc aattggtcgc aggttcgaat cctgcacgac
    10081 ccaccaattt taacatcaaa ctcagatgtt aagcgtgaag gataacgttg cgccagcaac
    10141 ggcccgtagg gcaagcgaag cgagtcatcc tgcacgacac accaatctta aagattggcc
    10201 ccgagtagaa atctttcagg taacacccgt atgggtcgtt agctcagttg gtagagcagt
    10261 tgacttttaa tcaattggtc gcaggttcga atcctgcacg acccaccatc ctgaatgatt
    10321 aaagcagcat aatcccgcaa ggggtcgtta gctcagttgg tagagcagtt gacttttaat
    10381 caattggtcg caggttcgaa tcctgcacga cccaccaatg taaaaaagcg ccctaaaggc
    10441 gcttttttgc tatctgcgat actcaaagat tcgaacctgc agcaggtttg agttgagcgc
    10501 agcgaaacaa cggagccgct cgcggcgacg gcccgaaggg cgagcgaagc gagtcatcct
    10561 gcacgaccca ccaatgtaaa aaagcgccct aaaggcgctt ttttgctatt caggcatcct
    10621 caatttcact ttgtaaacct gatgacatcg tcagagctta ctgtgcaagc aactctacgt
    10681 cggtggaatt aggcgtaatt cgagtgactt ttccccacca ttcgactatc ttgtttagca
    10741 tataaaacaa attacaccga taacagcgaa tattacgcta atgtcggttt taacgttaag
    10801 cctgtaaaac gagatggtaa gatgagcgta atgtttgatc cagacacggc gatttatcct
    10861 ttccccccga agccgacgcc gttaagcatt gatgaaaaag cgtattaccg cgagaagata
    10921 aaacgtctgc taaaagaacg taatgcggtg atggttgccc actactatac cgatcccgaa
    10981 attcaacaac tggcagaaga aaccggtggc tgtatttctg attctctgga aatggcgcgc
    11041 ttcggtgcaa agcatcccgc ttctactttg ttagtcgctg gggtgagatt tatgggagaa
    11101 accgccaaaa ttctcagtcc ggaaaaaaca attctgatgc cgacacttca ggctgaatgt
    11161 tcactggatc tcggctgccc tgttgaagaa tttaacgcat tttgcgatgc ccatcccgat
    11221 cgtactgtcg tcgtctacgc caacacttct gctgcggtaa aagcgcgcgc agattgggtg
    11281 gtaacttcaa gcattgccgt cgaacttatt gatcatcttg atagtttggg tgaaaaaatc
    11341 atctgggcac ccgacaaaca tctggggcgt tacgtgcaaa aacagacggg tggagacatt
    11401 ctatgctggc agggtgcctg tattgtgcat gatgaattta agactcaggc gttaacccgc
    11461 ttgcaagaag aatacccgga tgctgccata ctggtgcatc cagaatcacc acaagctatt
    11521 gtcgatatgg cggatgcggt cggttccacc agtcaactga tcgctgctgc gaaaacattg
    11581 ccacatcagc ggcttatcgt ggcaaccgat cggggcattt tctacaaaat gcagcaggca
    11641 gtgccagata aagagttact ggaagcacca accgcaggtg agggtgcaac ctgccgcagc
    11701 tgcgcgcatt gtccgtggat ggccatgaat ggccttcagt ccatcgcaga ggcattagaa
    11761 caggaaggaa gcaatcacga ggttcatgtt gatgaaaggc tgcgagagag ggcgctggtg
    11821 ccgctcaatc gtatgctgga ttttgcggct acactacgtg gataacgaat aataaggcgt
    11881 aacgttacgc tttgggggaa agatggattt ttttagtgtg cagaatatcc tggtacatat
    11941 accaataggg gcaggcggtt atgatctctc atggatcgaa gcggtaggca cgatcgccgg
    12001 gttgctgtgt attggccttg ccagtctgga gaagatcagc aactacttct ttggcctgat
    12061 caacgtcacc ttgtttggca ttattttctt tcagattcag ctgtatgcca gcctgctatt
    12121 acaggtgttt ttctttgccg cgaatattta cggttggtat gcgtggtcgc gacaaaccag
    12181 tcagaacgag gcggagttga aaattcgctg gttgccattg ccgaaggcac tcagctggtt
    12241 ggcggtttgc gttgtttcga ttggtctgat gacggtattt atcaatccgg tgtttgcatt
    12301 tttgacccgc gtggcagtca tgatcatgca agcattagga ttacaggttg tgatgcctga
    12361 actgcaaccg gacgctttcc cgttctggga ttcatgcatg atggtgttat ctatcgtggc
    12421 aatgattctg atgacgcgta agtatgtgga aaactggctg ttgtgggtga ttattaacgt
    12481 gattagcgtc gttatttttg cacttcaggg cgtttacgcc atgtctctgg agtacatcat
    12541 cctgaccttt attgcgctca acggcagccg gatgtggatc aacagcgcac gtgaaagagg
    12601 ctcacgcgcg ctgtcccatt aatggtgatg atgtgaatgg ccagacaccc cttcattcag
    12661 gtggcagtct ggcccatgac aaggttgata ttccatctga atggtggcgt gctcaatctg
    12721 atagtgatcc atcaggtagt gttggatctg atccaacaag gcatcgtgat cgtgtggcgg
    12781 gatcacctgc acatgcaacg tcatcaccgg cttctcgcct accatccata catgtacatg
    12841 gtgcacattg cggacttccg ggatttcccg gcacatacga cgcttcagtt cagcgatatc
    12901 cagcgatacc ggtgcacctt caagtaattc attcacgcta tctttcaaca gtcgccacgc
    12961 gctacgcaga accagaagcg acaccagtat cgagagaatg gggtcagcag gtgtccagcc
    13021 agtccagata ataatcaacg cggcaataat agccccaacc gaacccagca ggtccccgag
    13081 cacatgcagt gccgctgctc gtacgttgag gtttttctct tcgctgccgt gatgaagtaa
    13141 ccagaaagaa agtatatttg ccagcaaccc agccacggca attgccatca tcatgccgcc
    13201 ctcgaccgga cgcggcgtgc ggaagcgttc tatcgcctcc cagacaatca aaatggtaat
    13261 taccacgagg gctatggcat tcacaaacgc cgcgagcgtg gtcagtctta gccaaccgaa
    13321 agtgtggcga atggtgggag gacgacgtga aaattgcacg gcgagtaggg cgaaaagcag
    13381 ggcggcagta tcggtcaaca tatgacccgc atcggccagc aatgccagag aaccagaaag
    13441 aaaaccacca acgacttcta ccagcataaa cccggcagtc acgccgaaag catacaacaa
    13501 gcgacgagca ttattatctt ctggcaggtg tgaggacgtg tgtgagtgtg agtgcgccat
    13561 gacgagtcat cccttaatta ttctcactta actttatgac atcatactgc ttttagaagt
    13621 gaaaaattaa aagggagaga ctccgctctc ccattattgg ctattttgca gggttactgc
    13681 gtggtaccgt cggttttggt atcgacatca ttattgatgc catcaccggt ttgtaccttt
    13741 ttattgatat ccggacagcg accatctttg cacatggtgt tcttgtgctc ttcatctttg
    13801 gtcattccgt cattgttcat tgaagaacca tccgaatgca gcattgtgcc accagaaccg
    13861 gtatttaccc cgttattgtc gacgttattt ggcgcgacat tttcacgggc gtcaggggct
    13921 acctggcccg catcagctgc ggcgtttgcc tggccgttat tagtttgcgc tccgctatcg
    13981 gcagccagtg cggcaccgct ggcaaggctt agagtggcag tcagaaataa tgtggccagt
    14041 tttgtcattt tcataggatg ctcctgttat ggtcgttatg tcggataacc tcttccaaca
    14101 gtgcatttgc aggtgaatat aaggcattgg tttaagattt cagccaggtt atgaaacgca
    14161 gcagagaatc ttgaaataat taacaaacaa aggagttaca gttagaaatt gtaggagaga
    14221 tctcgttttt cgcgacaatc tggcgttttt cttgctaatt ccaggattaa tccgttcata
    14281 gtgtaaaacc ctgtttacac attctgacgg aagatataga ttggaagtat tgcattcact
    14341 aagataagta tggcaacact ggaacagaca tgaattatca gaacgacgat ttacgcatca
    14401 aagaaatcaa agagttactt cctcctgtcg cattgctgga aaaattcccc gctactgaaa
    14461 atgccgcgaa tacggttgcc catgcccgaa aagcgatcca taagatcctg aaaggtaatg
    14521 atgatcgcct gttggtggtg attggcccat gctcaattca tgatcctgtc gcagcaaaag
    14581 agtatgccac tcgcttgctg gcgctgcgtg aagagctgaa agatgagctg gaaatcgtaa
    14641 tgcgcgtcta ttttgaaaag ccgcgtacca cggtgggctg gaaagggctg attaacgatc
    14701 cgcatatgga taacagcttc cagatcaacg acggtctgcg tatagcccgt aaattgctgc
    14761 ttgatattaa cgacagcggt ctgccagcgg cgggtgagtt tctcgatatg atcaccccac
    14821 aatatctcgc tgacctgatg agctggggcg caattggtgc acgtaccacc gaatcgcagg
    14881 tgcaccgcga actggcgtct ggtctttctt gtccggtagg ttttaaaaat ggcacagacg
    14941 gtacgattaa agtggctatc gatgccatta atgccgccgg tgcgccgcac tgcttcctgt
    15001 ccgtaacgaa atgggggcat tcggcgattg tgaataccag cggtaacggt gattgccata
    15061 tcattctgcg cggcggtaaa gagcctaact acagcgcgaa gcacgttgct gaagtgaaag
    15121 aagggctgaa caaagcaggc ctgccagcac aggtgatgat cgatttcagc catgctaact
    15181 cgtccaaaca attcaaaaag cagatggatg tgtgtgctga cgtttgccag cagattgccg
    15241 gtggcgaaac agccattatt ggcgtgatgg tggaaagcca tctggtggaa ggcaatcaga
    15301 gcctcgagag cggggagccg ctggcctacg gtaagagcat caccgatgcc tgcatcggct
    15361 gggaagatac cgatgctctg ttacgtcaac tggcgaatgc agtaaaagcg cgtcgcgggt
    15421 aaggtttaat tgtcggatgc gccgtcagag tggcgtatcc gatgaatcac cacaggcctg
    15481 ataagacgcg cagcgtcgca tcaggcaatg tgctccattg ttagcaacaa aaaagccggc
    15541 tcacttgcag tcggctttct catttttaaa cgaatgacgt ttacttcgct ttaccctggt
    15601 tagcaaccgc cgctgctttc gctgcgatct cgtcagcatt acccagataa tagcgtttca
    15661 gcggtttgaa attctcgtcg aactcataca ccagcggcac gccggtcggg atattcagct
    15721 caagaatctc ttcttcactc atgttatcaa gatatttcac cagcgcacgt aaagagttac
    15781 cgtgtgcagc gatgatcacg cgctcaccgc tcttcatacg cggtagaata gtttcattcc
    15841 agtaagggat cacgcggtca atggtcagcg ccaggctttc cgtcagcggc agttctttct
    15901 cgctcagctt cgcgtaacgt ggatcgtgac ccggataacg ctcatcatct ttagtcagtt
    15961 ccggcggagt gactgcaaaa ccacgacgcc actgtttcac ctgctcgtcg ccatactttt
    16021 cagcggtttc tgctttgttc agaccctgca acgcaccgta gtgacgttcg ttcagtttcc
    16081 aggatttctc aacgggcagc catgcctgat ccagttcgtc cagcacattc cacagggtat
    16141 ggatagcgcg tttcagcaca gaagtgtaag caaagtcaaa gctgtaacct tcctctttca
    16201 gcagcttacc tgctgctttt gcttcgctta cgcctttctc agacagatcc acgtcgtacc
    16261 aaccggtgaa acggttttct ttgttccact gactttcgcc atgacgaacc agaaccagct
    16321 tagttacagc catatactta ctcctcaaat cattttttaa tgataataat tctcattata
    16381 ttgccgtgac gaagcaacag caatgcttac gcataaccat agcgaaaata gtgtcgcagt
    16441 gtaaggttgt tgtgaatatt gagttgcaaa tatgtcggtg tttgctggtg atttgagcaa
    16501 tataaggata aagccctcat tacgagggct tcaggtgcta ctcagcaata aactgatatt
    16561 ccgtcaggct ggaatactct tcgccaggac gcaggaagca gtccggttgc ggccattcag
    16621 ggtggtttgg gctgtccggc agaaactcgc tttccagtgc caggccttgc cagtcggcgt
    16681 aaggttcagt tcctcttgat ggcgtgccgc cgaggaagtt gccggagtag aattgcagag
    16741 ccggagcggt ggtgtagacc ttcagctgca atttttcatc tgctgaccag acatgcgccg
    16801 ccactttctt gccatcgcct ttggcctgta acaagaatgc gtgatcgtaa cctttcactt
    16861 tgcgctgatc gtcgtcggca agaaactcac tggcgatgat tttggcgcta cggaaatcaa
    16921 aagacgttcc ggcgacagat ttcaggccgt cgtgcggaat gccgccttca tcaaccggca
    16981 gatattcgtc cgccagaatc tgcaacttgt gattgcgcac gtcagactgc tcgccgtcaa
    17041 gattgaaata gacgtgatta gtcatattca ccgggcaagg tttatcaact gtggcgcgat
    17101 aagtaataga gatacggtta tcgtcggtca gacgatattg caccgtcgcg ccgagattac
    17161 ccgggaagcc ctgatcgcca tcatctgaac tcagggcaaa cagcacctga cgatcgttct
    17221 ggttcacaat ctgccagcga cgtttgtcga acccttccgg gccgccgtgc agctggttaa
    17281 cgccctgact tggcgaaagc gtcacggttt caccgtcaaa ggtataacgg ctattggcga
    17341 tgcggttggc ataacgacca atagaggccc ccagaaacgc agcctgatcc tgatagcatt
    17401 ccgggctggc acagccgagc agcgcctcgc ggacgctgcc atcggaaagc ggaatacgag
    17461 ctgaaagtaa agtcgcaccc cagtccatca gcgtgactac catccctgcg ttgttacgca
    17521 aagttaacag tcggtacggc tgaccatcgg gtgccagtgc gggagtttcg ttcagcactg
    17581 tcctgctcct tgtgatggtt tacaaacgta aaaagtctct ttaatacctg tttttgcttc
    17641 atattgttca gcgacagctt gctgtacggc aggcaccagc tcttccggga tcagcgcgac
    17701 gatacagccg ccaaatccgc cgccggtcat gcgtacgcca cctttgtcgc caatcacagc
    17761 tttgacgatt tctaccagag tgtcaatttg cggcacggtg atttcgaaat catcgcgcat
    17821 agaggcatga gattccgcca tcaactcgcc catacgtttc aggtcgcctt gctccagcgc
    17881 gctggcagct tcaacggtgc gggcgttttc agtcaggata tgccgcacgc gtttcgccac
    17941 gattgggtcc agctcatgtg caacagcgtt gaactcttca atggtgacat cgcgcagagc
    18001 tggctgctgg aagaaacgcg caccggtttc gcactgttca cgacgggtgt tgtattcgct
    18061 gccaaccagg gtacgtttga agttactgtt gatgatgacg acagccacac ctttcggcat
    18121 ggaaactgct ttagtcccca gtgagcggca gtcaatcagc aaggcatgat ctttcttgcc
    18181 gagtgcggaa attagctgat ccatgatccc gcagttacag ccaacaaact ggttttctgc
    18241 ttcctgaccg ttaagcgcga tttgtgcgcc gtccagcggc agatgataaa gctgctgcaa
    18301 tacggttccg accgcgactt ccagtgaagc ggaagaactt aacccggcac cctgcggcac
    18361 attgccgctg atcaccatgt ccacgccgcc gaagctgttg ttacgcagtt gcagatgttt
    18421 caccacgcca cgaacgtagt tcgcccattg atagttttca tgcgcgacaa tgggcgcatc
    18481 gagggaaaac tcgtcgagct gattttcata atcggctgcc attacgcgaa ctttacggtc
    18541 atcgcgtggc gcacagctga tcacggtttg ataatcaatc gcgcagggca gaacgaaacc
    18601 gtcgttgtag tcggtgtgtt caccaatcaa attcacgcgg ccaggcgcct gaatggtgtg
    18661 agtggcaggg tagccaaatg cgttggcaaa cagagattgt gttttttctt tcagactcat
    18721 ttcttacact ccggattcgc gaaaatggat atcgctgact gcgcgcaaac gctctgctgc
    18781 ctgttctgcg gtcaggtctc gctgggtctc tgccagcatt tcataaccaa ccataaattt
    18841 acgtacggtg gcggagcgca gcagaggcgg ataaaagtgc gcgtgcagct gccagtgttg
    18901 attctcttcg ccattaaatg gcgcgccgtg ccagcccata gagtagggga aggagcactg
    18961 gaagaggttg tcataacgac tggtcagctt tttcaacgcc agcgccaaat cgctgcgctg
    19021 ggcgtcggtc aaatcggtga tccgcaaaac gtgggctttg ggcagcagta gcgtttcgaa
    19081 cggccaggca gcccagtaag gcacaacggc taaccagtgt tcggtttcga caacggtacg
    19141 gctaccgtct gccagctcgc gctgaacata atccaccagc attggtgatt tctgttcggc
    19201 aaaatattct ttttgcaggc ggtcttcgcg ctcagcttcg ttaggcagga agctatttgc
    19261 ccaaatctgt ccgtgcggat gcgggttaga gcagcccatc gccgcacctt tgttttcaaa
    19321 gacctgcacc cacgggtacg tttttcccag ctctgcggtt tgctcctgcc aggttttgac
    19381 gatttccgtc aatgccgcaa cgctcagttc tggcaacgtt ttactgtgat ccggtgaaaa
    19441 gcagatcacc cggctggtac cgcgcgcgct ctggcaacgc atcaaaggat cgttgctttc
    19501 tggcgcatct ggcgtgtcag acatcaaggc cgcaaagtca ttagtgaaaa cgtaagttct
    19561 ggtgtaatcg gggtttttat cgcctgtcac ccgcacatta cctgcgcaga ggaagcaatc
    19621 tggatcgtgc gcaggtaaca cctgtttggc tggcgtttcc tgcgccccct gccaggggcg
    19681 cttagcgcgg tgcggtgaaa ccagaatcca ttgcccggtg agcgggttgt agcggcgatg
    19741 tggatgatca acgggattaa attgcgtcat ggtcgttcct taatcgggat atccctgtgg
    19801 atggcgtgac tgccagtgcc aggtgtcctg cgccatttca tcgagtgtgc gcgttacgcg
    19861 ccagttcagt tcacggtcgg ctttgctggc gtccgcccag taggccggaa ggtcgccttc
    19921 gcgacgcggt gcaaaatgat agttaaccgg tttgccgcag gctttgctga aggcattaac
    19981 cacgtccagc acgctgctgc ctacgccagc accgaggttg tagatgtgta cgcctggctt
    20041 gttcgccagt ttttccatcg ccacgacgtg accgtccgcc agatccatta cgtggatgta
    20101 atcgcgtacg ccagtaccat cttcggtcgg ataatcgtta ccaaaaatcg ccagcgagtc
    20161 gcgacggcct acagcaacct gggcgatgta tggcatcagg ttattcggaa tgccttgcgg
    20221 atcttcgccc atatcgcccg acggatgcgc gccaaccggg ttgaagtagc gcagcagggc
    20281 aatgctccag tccggctggg ctttttgcag gtcggtgagg atctgttcca ccatcaattt
    20341 gcttttgcca taagggcttt gcggtgtgcc ggtcgggaag ctttcaacgt atggaatttt
    20401 gggctgatcg ccataaacgg tggcggagga gctaaaaata aagtttttga cgttagcggc
    20461 gcgcatggcg ctaatcaggc gcagagtgcc gttgacattg ttgtcgtaat attccagcgg
    20521 tttttgtacc gattcgccaa cggctttcag cccggcgaag tggatcacgg tgtcgatagc
    20581 gtgatcgtgc aggatctcgg tcatcaacgc ttcgttacga atatcgcctt caacaaacgt
    20641 tggatgtttg ccgcctaaac gctcgataac aggcagtacg ctgcgcttac tgttacagag
    20701 gttatcaaga atgatgacat catgaccgtt ttgcagtaat tgcacgcagg tatgacttcc
    20761 aatgtaaccg ctaccaccgg taaccagaac tctcataatt cgctccatta ggcttatggt
    20821 atgaaataac catagcataa caaagatgcg aaaagtgtga catggaataa attagtggaa
    20881 tcgtttacac aagaatttag ccgtttttat atgcgattaa gtgattataa aacagaggat
    20941 ttatgaatga ttgcgctttt tatctgaaaa aaaagacgcg gtttcatgcc ttgatgcgtc
    21001 gaactgtagg ccggagaggg ggcttacgcc acatccggca cagtcagcat taccaactca
    21061 gtttattttt gtcagcgcat agcgataaag gtcaccgtcc gacacgaact caaggcgatg
    21121 ggtaatacag gcaggcgcat cttcagcgtg gtgcgaaaca aacaacaatt gcgtttcacc
    21181 ttcgctaatc agcacatcaa caaaacggcg gataagttgg cgattgagcg gatcaagccc
    21241 ctgtagtggt tcatcgagaa taagcaacgt cggatgtttc accagtgcgc ggacgatcag
    21301 cgccagacgc tgctgtcccc aggaaagact atggaaagga gcgtcagccg tgcgtttatc
    21361 aatgccgaga atatccagcc actgctgcac cagtttttgc tggcgatccg aaacggcctg
    21421 ataaatgcca atcgaatcaa aatagccaga aagaatcaca ttacgcacgg tagtgctgac
    21481 ccggtaatcc agatgcaaac tactgctgac gtaaccgata tgctttttga tatcccagat
    21541 ggtttcgccg ctgccgcgac gtcgtccgaa aagcgtcaaa tcgttgctgt aaccttgcgg
    21601 atgatcgcca gtaaccaggc ttaataacgt cgattttcct gcaccatttg gcccgacaat
    21661 ttgccagtgt tcgcctggat tcacctgcca gctaaggtta ttaagaatgg ggcgatcgtt
    21721 ataagaaacc acgccattgt tcagcacaat gcgcggttcg ttggcgggta aggcgtgacg
    21781 tgctgaaggt tcatccggct ccggcagttg cacaccttca agctgttcac tatgcgccag
    21841 ttgcgcgacg agtgcttgtt ggagcagttc ctctttagcg ccagtttccg ctaacgtgca
    21901 atccgccagc acgccagcaa actggacaaa ctccgggatc tcatcgaagc gattgagcac
    21961 cagtaccaga gtaataccgg actgatgtaa cgaggcgagt cgctcagcca gctgctgacg
    22021 tgaggcaaca tccaggccat cgaacggctc atcaagaatc aacaagtcag gctccgacat
    22081 cagcgcctga cacagcaggg tttttcgcgt ctcgccagtg gaaaggtatt taaagcgtcg
    22141 gtcgaggagg gcggtaatac cgaactgctg cgccagttgc atgcaacgcg gtgcatcctt
    22201 tacttcatcc tgaatgatct cagccgtagt gcgtccggtg tcatcttcgc cagggccgag
    22261 catatcggtg ttattccgct gccattcgtc gctgacgagt ttttgcaatt gctcgaagga
    22321 gagacgagtg atgtgggaaa actggctttg ccgttcacct ttcaaaagcg gaagttcccc
    22381 cgccagtgcg cgggccaggg ccgatttccc gcttccattc gaaccgacaa acgcccaact
    22441 atcacccgcg tttaacgtta gctgaggcaa ttgcagcgtt tttgtgtcgc taagacgaaa
    22501 cgtgccttgc aaaatttgca acgatgacat tttatatccc attttgtgca gcgattactg
    22561 acagggatac gtgtttcata acaaattgtc aacacgctta gcacagcgtg gcgataatca
    22621 cgctgtcggc attaaagtag gccgtgacat tctgcccttg ctgaagagaa gtcgcttcat
    22681 ttaccggcac tgtggcgcac agtgtttgcc cgtcgggtag cgccattaat acttcgcact
    22741 gctctgcgcc gcgctcaata tgactaataa tacccggtaa ttggttgtca gcgttttgcg
    22801 cgaccgcctc gtcctgagta atacctaccc acggcgcttt tagcaatatc aacacttctt
    22861 tgccttcatc cagccccaga cgcgcgccgc tttgtgcggt aattgcgact ttcaggcgtg
    22921 tttttccgtc agccagtaag acatcaacat gctgttgaac gtcatcatga tcgcgggcgg
    22981 tgatggtgcc gaaccactgg ttacgggcgc tggtttgcag tgaaaaacgt gagatcgcgg
    23041 ccagcaggct gttcagcggc agggcgtcat cgtcacttaa cacatcaaag gctttttgct
    23101 ggatttgcgc cagtaagtca tagagctgaa tcagtcgctg accatagcgg gtcagtactg
    23161 cgccgccgcc acctttaccg cctgttgcgc gctcgaccag aatatgctca cttaactgat
    23221 tcatctcgtt aatggcatcc caggcgcttt tatagctgat accggcatct ttcgctccct
    23281 ggctaatgga accggaaagc gcaatgtgtt ttagtagcga aatccggcgc gggtcggcga
    23341 ataatttttg ttggagctta agggtgagaa ggatttcggc ctgcataaca atgtcctggc
    23401 aaaagtctta ttgtgacgga aaacgaacgc cacgcaaagc tgaccgcaca aaaggggagt
    23461 gcttttctgt gcttagcggt tagaatagtc tcatgactat atctggagtt gaccatgtta
    23521 gagttattaa aaagtctggt attcgccgta atcatggtac ctgtcgtgat ggccatcatc
    23581 ctgggtctga tttacggtct tggtgaagta ttcaacatct tttctggtgt tggtaaaaaa
    23641 gaccagcccg gacaaaatca ttgattccct gaatgcccgc ttagtcgggc attttctttt
    23701 tctcaacttc ctgcttttcc tgccgatatt ttttcttatc tacctcacaa aggttagcaa
    23761 taactgctgg gaaaattccg agttagtcgt tatattgtcg cctacataac gttacattaa
    23821 ggggttacca atggctcgta aatggttgaa cttgtttgcc ggggcggcac tctctttcgc
    23881 tgttgctggc aatgcactgg cagatgaagg gaaaatcacg gtgttcgccg ccgcatcact
    23941 gactaacgca atgcaggaca ttgctacgca gtataaaaaa gagaaaggcg tggatgtggt
    24001 ttcttctttc gcttcgtcat ctactctcgc ccgtcagatt gaagcgggtg cccctgcgga
    24061 tctgtttatt tctgccgatc agaaatggat ggattatgcg gttgataaaa aagcgatcga
    24121 tactgctacg cgtcagacac tgctcggcaa tagcctggtc gttgtagcac cgaaagccag
    24181 cgagcagaaa gatttcacca tcgacagcaa aaccaactgg acttcgctgc tgaatggcgg
    24241 tcgtctggcg gttggcgatc cggaacatgt tcccgctggc atttatgcaa aagaagcact
    24301 gcaaaaactg ggcgcatggg atacgctctc tccgaaactg gctccggcgg aagatgttcg
    24361 tggcgcgctg gcgttggtcg aacgcaatga agcgccgctg ggcatagttt acggttctga
    24421 cgcagttgcc agcaaagggg taaaagtggt cgccaccttc ccggaagatt cgcataaaaa
    24481 agtggaatac ccggttgctg ttgtggaagg gcataacaat gcgacagtga aagcatttta
    24541 tgattatttg aaagggccgc aggctgcgga aatctttaaa cgttacggat ttacaaccaa
    24601 gtaatgatac tgaccgatcc agaatggcag gcagttttat taagcctgaa agtttcttcc
    24661 ctggctgtgc tgtttagcct gccgtttggg atcttttttg cctggttact ggtgcgttgc
    24721 acgtttccgg gcaaagctct gctcgacagc gtactgcatc taccgctggt gttaccgccc
    24781 gtggtcgtcg gttacttatt attagtttcg atgggacggc gcgggtttat cggtgaacgt
    24841 ctgtatgact ggtttggcat taccttcgcc tttagctggc gcggcgcggt tctcgctgcc
    24901 gccgtcatgt cgtttccgct gatggtgcgg gcaattcgtc tggcgctgga aggggttgat
    24961 gtcaaactgg aacaggccgc aagaacactg ggggccgggc gctggcgcgt tttctttact
    25021 atcacgatac cgctgacctt accgggaatt attgttggta cggtactggc ttttgctcgt
    25081 tctctcggtg aatttggcgc aaccatcacc tttgtgtcga acattcctgg tgaaacgcga
    25141 accattcctt ctgccatgta taccctgatt cagacccccg gcggggaaag tggcgcagcg
    25201 agactgtgca ttatttctat tgcgctggcg atgatctccc tgttgatttc agaatggctg
    25261 gccagaatca gccgtgaacg ggcggggcgc taatcatgct ggaactgaat ttttcccaga
    25321 cgttgggcaa ccattgcctg actattaatg aaacgctgcc cgccaatggc atcactgcta
    25381 tctttggcgt ctccggtgcc ggaaaaactt cgctgattaa cgccatcagt ggactgacgc
    25441 gcccgcaaaa agggaggatt gtcctcaatg gtcgggtact aaatgatgcc gaaaaaggta
    25501 tctgcctgac gccagaaaag cgtcgcgttg gctatgtttt tcaggatgcg cggctgtttc
    25561 cgcattacaa agtgcgtggc aatctgcgct acggcatggc gaaaagcatg gtcgatcagt
    25621 tcgataagct ggtggcgctt ttaggcattg aaccgttgct tgaccgttta ccaggcagcc
    25681 tgtccggagg cgaaaaacag cgcgtagcga ttgggcgggc tttgctgacg gcaccagaat
    25741 tgctgttgct ggatgaaccg ctggcgtcac tggatattcc gcgtaaacgc gaactgttgc
    25801 cttatctgca acgtctgacg cgggaaatca acatcccgat gttgtatgtc agccattcgc
    25861 tggatgagat cctccatttg gcagacagag tgatggtact ggaaaacggt caggtgaaag
    25921 cctttggcgc actggaagaa gtctggggta gtagcgtgat gaatccgtgg ctgccgaaag
    25981 agcaacaaag tagcattctg aaagtgacgg tgcttgagca tcatccgcat tacgcgatga
    26041 ccgcgctggc gctgggcgat cagcatttgt gggtcaataa gctggacgaa ccgctgcaag
    26101 ctgcgctacg tatccgcatt caggcttccg atgtttctct ggttttacaa ccgccgcagc
    26161 aaaccagcat tcgtaacgta ttgcgggcaa aagttgttaa tagttatgac gacaacggcc
    26221 aggtggaagt ggaactggaa gtcggaggta aaacgctgtg ggcgcgtatc agcccgtggg
    26281 ccagggatga actggtgatc aaacctggcc tgtggctgta cgcgcaaatt aaaagtgtgt
    26341 cgataaccgc ctgattaaat caggtggcta taaatgaact gggcaatgct gtcggtggtg
    26401 ttatcaccaa tcacaatgtt ggcgcgcgct tttaccgcgt catcggcgtt gcccatcgcc
    26461 acgcctgtac cagcggcctc cagcatactg atatcattaa agttatcgcc gaacgccacg
    26521 acgttttcca tcgaccagcc ttgcgcctca acccatttcg tcaaacgttt acctttgctg
    26581 ttgccgccgc gtgcaatatc aacctgatcg tgccaggacc attcacactc cagtcccagt
    26641 tcatgttcga catgcttacc aaaatgctgc aattgcggca ggtcatcgtg cgtcagggcg
    26701 aacttccata cggcgttaac ttgttgcgcc gtttcagcca gagaagcgac ttgtgtgaaa
    26761 gtcggacgct gttccggcgg cagggtttgc gcccagttag acgtgcgaat gacatgcccg
    26821 gtcgggtgct catagaccat tgcatcatcc acatacatca gaccgtgaat gtggtgttca
    26881 ttcagcatct caatgagttg cagggcttta ttaacgggca ttgggtccgc ttccagcacg
    26941 gtttttgcat gataatcata caaataggtg ccattacagc aaatagcagg tgtatccagc
    27001 gccagcgcct gataaaaagg atgaatagcg acgtgatggc gacctgtgac gatgattaat
    27061 tgatagcctg cttcgcgagc gcgggccagg gcttctatcg atgaaggaag cagggtcttt
    27121 ttcggggtca ataaggtgcc gtctaagtcg agagcaatca cgcgtgtggt catggcgtat
    27181 tccagattaa ggttaagaat tttcgtctgc gcgaatggta caccgatacc actatcggac
    27241 aaaattctgc gttttaattc agcattcacc gccaaaagcg actaatttta gctgttacag
    27301 tcagttgcta aatgcaaagg agcattcatg aagcaaacag tttatatcgc cagccctgag
    27361 agccagcaaa ttcacgtctg gaacctgaat catgaaggcg cactgacgct gacacaggtt
    27421 gtcgatgtgc cggggcaggt gcagccgatg gtggtcagcc cggacaaacg ttatctctat
    27481 gttggtgttc gccctgagtt tcgcgtcctg gcgtatcgta tcgccccgga cgatggcgca
    27541 ctgacctttg ccgcagagtc tgcgctgccg ggtagtccga cgcatatttc caccgatcac
    27601 caggggcagt ttgtctttgt aggttcttac aatgcgggta acgtgagcgt aacgcgtctg
    27661 gaagatggcc tgccagtggg cgtcgtcgat gtggtcgagg ggctggacgg ttgccattcc
    27721 gccaatatct caccggacaa ccgtacgctg tgggttccgg cattaaagca ggatcgcatt
    27781 tgcctgttta cggtcagcga tgatggtcat ctcgtggcgc aggaccctgc ggaagtgacc
    27841 accgttgaag gggccggccc gcgtcatatg gtattccatc caaacgaaca atatgcgtat
    27901 tgcgtcaatg agttaaacag ctcagtggat gtctgggaac tgaaagatcc gcacggtaat
    27961 atcgaatgtg tccagacgct ggatatgatg ccggaaaact tctccgacac ccgttgggcg
    28021 gctgatattc atatcacccc ggatggtcgc catttatacg cctgcgaccg taccgccagc
    28081 ctgattaccg ttttcagcgt ttcggaagat ggcagcgtgt tgagtaaaga aggcttccag
    28141 ccaacggaaa cccagccgcg cggcttcaat gttgatcaca gcggcaagta tctgattgcc
    28201 gccgggcaaa aatctcacca catctcggta tacgaaattg ttggcgagca gggactactg
    28261 catgaaaaag gccgttatgc ggtcgggcag ggaccaatgt gggtggtggt taacgcacac
    28321 taaccgctga tttaaccggc gcagtctctc ctgcgccggt gtattaacct atctcctgta
    28381 acgcatgtct ctggcgttcg acgatattgg tccacaaatt gtctttatcg tcagtccaca
    28441 aattaatcag caaggcaaaa aagcgttcag ctgccggaga aagcacggca tctttgcggc
    28501 gaataatccc caatgtccga cgtataacgg gttccaccag tgggatacca ataatcgaag
    28561 aatagggcgc atggggcatt gccagaccag gaagcgccga aatccccagt cctgcctcca
    28621 ctagtcctaa tgacgtcgaa agatgacgca cttcgtaaaa ccagtccagc ttccagggct
    28681 tgtcggctag ctgttgttct atcaacaatc ggttgccgct ggaggaacgt acgccaatca
    28741 ttttgtaacc cactaactcc tgccattcta caagctgctt tttggccaat ggatggtcac
    28801 gccgacaggc cagcacgaat ggctcgttga ccagtggggt aaaatcaatg gatgaatttg
    28861 tgacgttgtt catgtttatg ccaaagtctg attcgttaca cagcaccgat tccatgcaat
    28921 tattcgtgcc ttgttccaga atccgcactc taatattggg atacagctca ttaaatttac
    28981 cgattgccag cggtaaaaaa taaaatactg cggtcggaat acacgctaac gtcaccatac
    29041 cacgatgata agcattcata tcacgaatat taaaaagcgt ttcatcgaat ttctttatta
    29101 attcccgcgc ctccgggagc aacctttttc ctgcttttgt taacgtaacc ttgcgagttg
    29161 tacgctcaaa tagttgaata tgtaaatctt cctccatctt ttttattctt cgcgttaatg
    29221 caggttgcgt aatattgagt aatttagcgg cattgttaaa tgaactggac tctgccagta
    29281 tgacaaatgc cttcatactt gataattcat gcttcattat tactccggaa aatggaagcg
    29341 acgattttgg gtggctggtc gttaaaaatt ttaactgcat ttagccaact taaattaatg
    29401 aaaaaatgtt attaatcgtt gagctaaagt cattagagat gctttgtcct taatgtaacc
    29461 atatcgcaat aagttatgtt tttaaattga gggcattatt atgaaaaaaa taccctgcgt
    29521 gatgatgcga ggtggaacct cgaggggcgc gttcttgtta gcggaacatt tacccgaaga
    29581 tcaaacgcag cgcgataaaa tattgatggc aattatgggt tccggtaacg atctggaaat
    29641 tgacggtatt ggcggcggta atccgctgac cagtaaagtc gccattatta gccgttccaa
    29701 cgatccgcgt gctgatgtcg attatctgtt tgctcaagtt attgtccatg agcaacgtgt
    29761 cgataccacg cctaattgtg gcaatatgct gtctggtgtt ggggcattcg ccattgaaaa
    29821 tggtttgatt gcagcgactt caccagttac ccgcgtacgt atccgcaacg tcaatactgg
    29881 tacgttcatc gaagctgatg tgcaaacgcc aaatggtgtt gtcgagtacg agggtagcgc
    29941 cagaattgac ggcgtaccgg gtactgccgc accggttgcg ctcactttcc tgaatgccgc
    30001 cggaaccaaa accggaaaag tcttcccgac tgataatcag attgattatt ttgacgatgt
    30061 cccggtgacc tgtatcgata tggcgatgcc agtcgtcatt attccggctg aatatctggg
    30121 aaaaacaggt tatgaattac cggcggaact ggatgccgac aaagcattat tagcccgcat
    30181 tgaatctatc cgtctacaag cgagtaaagc aatgggctta ggtgatgtca gtaatatggt
    30241 tatccctaaa cctgtgctta tttctccagc gcagaaaggc ggggcaatta atgtgcgtta
    30301 ttttatgccg cattcttgcc atcgcgcgct ggcgataacc ggtgctattg ctatttccag
    30361 tagttgtgca ttggaaggca ccgtcacccg acaaatcgtc ccttctgtag gatacggcaa
    30421 tatcaatatt gaacacccca gtggtgcgct cgacgttcat ttaagtaatg aaggtcagga
    30481 tgccacgacg ttacgcgcat ctgttattcg gacgaccaga aaaatatttt ccggtgaagt
    30541 ttatcttccc tgaaaaaatt cgttgtcagg ataaggacaa tcaataaagg acttctgtat
    30601 gagtcataca gaaagaacag gattttaaat gaataagaaa tcgttatgga agctaattct
    30661 gatattagcg atcccatgta ttattggttt tatgccagct ccggcaggat taagcgaact
    30721 ggcgtgggtg ctttttggta tttacctggc ggccattgtg gggctggtta tcaagccttt
    30781 cccggaacct gtcgtactgt taattgccgt tgctgcctcc atggtggtgg tcggtaactt
    30841 atccgacggt gcgtttaaga ccaccgccgt attaagcggt tactcttcag gtactacctg
    30901 gctggtgttc tcggcgttta ccttaagcgc cgcatttgtg accaccggtt taggtaaacg
    30961 tattgcctat ctgctgattg gtaaaatcgg taacaccacg ctgggtctgg gttacgttac
    31021 ggtattcctc gatctggtac tggctccggc aacaccgtct aacaccgcgc gtgcgggcgg
    31081 cattgtgtta ccgatcatca acagcgtggc ggtggctttg gggtccgaac cggaaaaaag
    31141 tccgcgtcgt gtcggacatt acctgatgat gtccatttac atggtcacca aaaccaccag
    31201 ctatatgttc tttaccgcaa tggcggggaa cattctggcg ctgaaaatga tcaacgacat
    31261 tctgcacctg caaattagct ggggtggatg ggcactggcc gccggattgc cgggcatcat
    31321 tatgctgctg gtcaccccgc tggtgattta taccatgtat ccgccagaaa ttaagaaggt
    31381 ggataataaa accatcgcta aagcgggcct tgccgaactg ggaccgatga aaatccgcga
    31441 aaaaatgctg ctcggtgtct ttgtgctggc gctgctgggc tggattttca gtaagtctct
    31501 gggggttgat gaatccaccg tggcaatcgt tgttatggcg accatgctgc tgctgggtat
    31561 cgttacctgg gaagacgtgg ttaaaaataa aggcggctgg aataccttaa tctggtacgg
    31621 cggtattatc ggattaagct ccttattatc gaaagttaaa ttcttcgaat ggttagctga
    31681 agtctttaaa aataacctgg catttgatgg tcacggtaac gttgctttct tcgttattat
    31741 tttcctcagc attatcgtgc gttatttctt cgcttccggt agtgcctata tcgttgctat
    31801 gttaccggta tttgccatgc tggcgaacgt ctccggcgca ccgttaatgt taaccgcgct
    31861 ggcactgttg ttctccaact cctatggcgg catggttact cactatggcg gcgcggcagg
    31921 tccggtcatc tttggcgtgg gttacaacga tattaaatcc tggtggttgg tcggtgcggt
    31981 actgacgata ttaaccttcc tggtgcatat caccctcggc gtgtggtggt ggaatatgct
    32041 gatcggctgg aacatgctgt aaatattctc gtcatacttc aagttgcatg tgctgcgtct
    32101 gcgttcgctc accccagtca cttacttatg taagctcctg gggattcact cgcttgtcgc
    32161 cttcctgcaa ctcaaattat ttagagtata tccatttatt atctttctgc gcacttcacg
    32221 gtgcgcagat atctggagca tttgatgatc aagttatctg aaaaaggcgt gtttctcgcc
    32281 agtaataacg aaataattgc tgaagaacat ttcaccggcg aaattaaaaa agaagaagcc
    32341 aaaaaaggca ctattgcctg gtctattctc tcttcgcata atacgtccgg aaatatggat
    32401 aaacttaaaa ttaagtttga ttcattagcc tctcacgata ttacctttgt tggtattgta
    32461 cagaccgcta aagcgtccgg tatggaacgt ttcccgctgc cgtatgtgct gaccaactgc
    32521 cataactcac tctgcgccgt cggcggcacc attaacggtg atgaccatgt ttttggttta
    32581 tcggcagctc agcgttatgg cggtattttt gtgcctccgc atattgcggt catccatcaa
    32641 tatatgcgtg agatgatggc aggcggcggc aaaatgatcc tcgggtcaga cagccacacc
    32701 cgttacggtg cattagggac aatggcagtc ggtgagggcg gtggtgagtt ggtaaaacag
    32761 ctgcttaatg acacctggga tatcgactat ccgggagttg ttgcggtgca tctgaccgga
    32821 aaaccagcgc cgtatgtggg gccgcaggat gtggcgctgg ctatcattgg cgcggtgttc
    32881 aaaaacggtt acgtcaaaaa caaagtcatg gagttcgttg gaccgggcgt tagcgcgctc
    32941 tctaccgatt tccgtaacag cgttgacgtg atgaccacgg aaaccacctg tttaagctcc
    33001 gtctggcaaa ctgatgaaga agtgcataac tggctggcgc tgcacggtcg cggccaggat
    33061 tactgccagc ttaaccctca accgatggcg tactacgatg gctgcatcag cgttgattta
    33121 agcgccatca aaccaatgat tgcgctgccg ttccacccga gcaacgtgta tgaaatcgac
    33181 acactgaacc agaacctgac cgacattctg cgtgagattg aaattgagtc cgaacgcgtg
    33241 gcgcacggta aagccaaact ctcgctgctg gataaagtgg aaaatggtcg cctgaaagtg
    33301 cagcagggga ttatcgcggg ctgttctggc ggtaactacg aaaacgtcat cgcggcggcg
    33361 aatgcactgc gcggtcaatc ctgtggcaat gacaccttct cgctggcagt ttacccgtca
    33421 tcacagccgg tgtttatgga tctcgccaaa aaaggtgtgg tagcagattt gattggcgca
    33481 ggcgcaatca tcagaaccgc gttctgcggc ccatgctttg gcgcgggcga tacgccaatc
    33541 aacaacggat taagtattcg ccacaccacg cgtaacttcc cgaaccgcga aggctctaag
    33601 ccagctaatg ggcagatgtc agcggtggcg ttgatggacg ctcgttctat cgctgcgact
    33661 gcggcaaacg gtggctattt aacctctgcc agcgaacttg attgctggga caacgtgccg
    33721 gagtacgcct tcgatgtaac gccgtataaa aaccgtgttt atcagggctt tgtgaaaggg
    33781 gcaactcagc aaccgctgat ttacggaccg aacattaaag actggccgga attgggtgcg
    33841 ctgactgaca atatcgtcct gaaagtgtgc tcgaagatcc tcgacgaagt gaccaccacc
    33901 gacgaactga ttccttccgg tgaaacctct tcttatcgtt caaatccgat tggtctggcg
    33961 gagtttaccc tgtcacgccg cgatcccggt tatgttggca gaagtaaagc gactgctgag
    34021 ctggaaaatc agcgtctggc ggggaatgtc agcgagctga cagaggtgtt tgcgcgcatt
    34081 aagcagattg ctggtcagga gcatattgat ccgctgcaaa ctgaaattgg cagcatggta
    34141 tatgcggtga aaccaggcga tggttctgcg cgtgaacagg cggcgagctg ccagcgtgtg
    34201 attggcggtc tggcgaatat tgccgaagag tacgcgacta aacgctaccg ttctaacgtc
    34261 atcaactggg ggatgttacc gctgcagatg gcggaagtgc caacctttga agtgggggat
    34321 tacatttaca tccctggcat taaagcggcg ctggataatc cgggtacgac gtttaaaggt
    34381 tatgtgatcc atgaagatgc gccggtaacg gaaattacgc tctatatgga aagtctgact
    34441 gctgaagagc gcgagattat caaggcgggt agtttgatta acttcaataa aaaccgtcag
    34501 atgtaaaaag cgccatgtga atgtaggtcg cattcggcac ttattgtcgg atgcgatgct
    34561 tgcgcatctt atccgaccta cgaatcgcat cgaatctgta ggccggataa ggcgtttacg
    34621 ccgcatccgg caaatagtta atagctctta cttcttcgcc tctgcaacca ctttactacc
    34681 cacgccgcgg ttattgtatt cccacatgcg gttgtagtta gtgtcattca gattgcgctg
    34741 tatttcgtcg ttatcatcta cgctgccggt attacccgca aacggacgat tagagatcac
    34801 cgcatcggcc cacggtttag ccgtgttaaa accttcgttg atggcgctat cacggatcac
    34861 cacctgaccg ttggtattgg catcaacatc cagcgagcgg cccagttgcg ccacaccatc
    34921 accgaaagca ttgaaacggc tgtttacggc gaggaaaccg tagtaaatgt tggacagcgt
    34981 agccggtgca aacacatacg cttcttgctg agtacgtgag ttcaccacgc ggaattcggt
    35041 gttatcgaac accactgcgc cgcgaccaga aacgatatcc acatcccctt caatgtagct
    35101 gttggtcacc agcgtacgcg gctgacgatt cgtttccaga cggttctgca caccgctgtt
    35161 ggtgacaaag aaggtgttct gacgaccgag aatgttaacg ttgttaatct gtacctggtc
    35221 accatcagta cgcagtgcca ccgccggatg gttacctgca tctacgctat cgcccagcgt
    35281 gttttcgatg gtcagatttt gcagttgcag gccattgttt tgtgaccaga agaccgcaga
    35341 gcagagaaca ccgatactgt cgctgcgttt gctctggcag ctatcgtaca tataccacgc
    35401 tggtttacct ggcatatatt tgccgcgcgg gttgacgtcg tgacgccagt cggcagggct
    35461 catgccacca tcaagggaaa gcccaatctt cacatcaatc ggtttttcac ctgtaccgta
    35521 cagagtaatt ccacccggag cggcagggac atataccgtt ccctgatact caccaggcat
    35581 cacggcaata tactggcgct tgttggtacg cttgataatt gccgcatcta ccgccgcctg
    35641 aatcgtggta tgcgttacac cttgagtgcc cgccgggccg acaacaaagt caggttgcgc
    35701 aggcagggta atcggggaag gattccacgc tgcagcacct ggtgtcaggg atgcaaaata
    35761 gtgttgagca tcgaaattct gcgcttcttt tgccgacaga atcgggcgag aagaggtacc
    35821 aggcgcggtt tgatcagaag gacgttgatc gggcggggtt gagctacagg cggtcagcgt
    35881 cacgccaaaa gccaatgcca gcgccagacg ggaaactgaa aatgtgttca caggttgctc
    35941 cgggctatga aatagaaaaa tgaatccgtt gaagcctgct tttttatact aacttgagcg
    36001 aaacgggaag gtaaaaagac aaaaagttgt ttttaatacc tttaagtgat accagatggc
    36061 attgcgccat ctggcagagt gattaactaa acatcgcagt aatcgaggcg cttgccagag
    36121 agtggaaatg aacgttaaac ccgaccatcg cgccgctggc accttcatcg acatcaatac
    36181 gttctatatc cagcgcgtga acggtaaaaa tgtagcgatg agtttcgcct ttcggcggtg
    36241 ctgcgccatc gtacccggtt ttaccaaagt cggtacgcgt ctgcaaaacg ccgtctggca
    36301 ttgctaccag accagagcca aacccttgcg gtaatacgcg ggtatcagcg ggtaagttaa
    36361 caactaccca gtgccaccag ccggagccgg ttggcgcatc cgggtcatag caggtgacga
    36421 caaaactttt cgttcccgca ggaacatcat cccacgccag atgcggtgaa atattatcgc
    36481 catcgtaacc catgccgtta aagacatgac gatgcggcaa cttatcgcca tcgcgcagat
    36541 cattactgat gagtttcatg aaccctcctt tctagtttgc agaaagtgta gccagaaacc
    36601 cacacgctga cttccgttat tggcaaaaaa atgtttcatc ctgcaccgca cggttaaccg
    36661 ctgcggtcag acgctgcaac tgttgcggga gaataatata gggcggcatc aggtaaatca
    36721 gtttgccaaa aggccggatc cagacaccct gttcgacaaa gaatttttgc agcgccgcca
    36781 tattcaccgg acgagttgtt tcgactacgc cgattgcccc cagcacgcgc acatcggcaa
    36841 ccatttcggc attacgggcg ggggcaagtt gctcgcgcag ctgtacttca atatccgcca
    36901 cctgttgctg ccagtcgcca gattcgagaa tcgccaggct ggcgtttgca gccgcgcagg
    36961 ccagcggatt gcccataaaa gttggcccgt gcataaagca gccggcctcg ccgttactga
    37021 tggtttctgc aacctcgcgc gtggtgagtg tggcggaaag ggtcattgtg ccgccggtta
    37081 aggctttacc gaggcacaaa atgtccggcg cgatttctgc atattcacag gcaaacagtt
    37141 tgccggtacg accaaatccg gtggcgatct cgtcggcaat cagcaagata ccttcgcgat
    37201 cgcacatttt gcggattcgt tttaaccatt ccggatggta catgcgcatc ccgcctgcgc
    37261 cctggacaat cggctcaatg atcaccgccg cgatttcatg acgatgcgcc gccatcaggc
    37321 gggcaaagcc caccatatcg cgctcatccc attcgccatc catgcggctt tgcggggcgg
    37381 gagcaaacag gttttctggc aggtagcctt tccacagact gtgcattgag ttatccggat
    37441 cgcacaccga catcgcgcca aaggtatcgc catgataacc attgcggaag gtcagaaaac
    37501 gctggcgcgc ttcgcctttg gcttgccagt actgcaacgc cattttcatc gacacttcca
    37561 ccgctacgga accggagtcc gcaagaaaaa cgcactccag cggttgcggc gtcatcgcca
    37621 ccagtttgcg gcacagctca atggctggcg tatgggtgat accgccaaac atcacatgcg
    37681 acatggcatc aatttgcgac ttcatcgccg cattaagctg tgggtgattg tagccgtgga
    37741 tcgccgccca ccaggacgac ataccgtcaa ccaggcgtct gccgtcagac aaaattagct
    37801 cgcaaccttc ggcgctcgcc accggataaa ccggcagagg ggaggtcatg gatgtgtatg
    37861 ggtgccagat atggcgttgg tcaaaggcaa tatcgtccgt tgtcataatc gacttgtaaa
    37921 ccaaattgaa aagatttagg tttacgagtc tacaccgaat taacaacaaa aaacacgttt
    37981 tggagaagcc ccatggctca ccgcccacgc tggacattgt cgcaagtcac agaattattt
    38041 gaaaaaccgt tgctggatct gctgtttgaa gcgcagcagg tgcatcgaca gcatttcgat
    38101 ccacgtcagg tgcaggtcag cacgttgctg tcgattaaga ccggagcttg tccggaagat
    38161 tgcaaatact gcccgcaaag ctcgcgctac aaaaccgggc tggaagccga gcggttgatg
    38221 gaagttgaac aggtgctgga gtcggcgcgt aaagcgaaag cggcgggatc gacgcgtttt
    38281 tgcatgggcg cggcgtggaa gaatccccac gaacgcgata tgccgtacct ggaacaaatg
    38341 gtgcaggggg taaaagcgat ggggctggag gcgtgtatga cgctgggcac gttgagtgaa
    38401 tctcaggcgc agcgcctcgc gaacgccggg ctggattact acaaccacaa cctggacacc
    38461 tcgccggagt tttacggcaa tatcatcacc acccgcactt atcaggaacg cctcgatacg
    38521 ctggaaaaag tgcgcgatgc cgggatcaaa gtctgttctg gcggcattgt gggcttaggc
    38581 gaaacggtaa aagatcgcgc cggattattg ctgcaactgg caaacctgcc gacgccgccg
    38641 gaaagcgtgc caatcaacat gctggtgaag gtgaaaggca cgccgcttgc cgataacgat
    38701 gacgttgatg cctttgattt tattcgcacc attgcggtcg cgcggatcat gatgccgacc
    38761 tcttacgtgc gcctttctgc cggacgcgag cagatgaacg aacagactca ggcgatgtgc
    38821 tttatggcag gcgcaaactc gattttctac ggttgcaaac tgctgaccac gccgaatccg
    38881 gaagaagata aagacctgca actgttccgc aaactggggc taaatccgca gcaaactgcc
    38941 gtgctggcag gggataacga acaacagcag cgtctggagc aggcgctgat gaccccggac
    39001 actgacgaat attacaacgc ggcagcacta tgagctggca ggagaaaatc aacgcggcgc
    39061 tcgctgcgcg gcgtactacc gatgccctgc gtcgccgtta tccggtaaca caaggagccg
    39121 gacgctggct ggtggcggac gatcgccagt atctgaactt ttccagtaac gattacttag
    39181 gcttaagcca tcatccgcac atcatccgcg cctggcagca gggggcggaa caatttggcg
    39241 tcggtagcgg cggctccggg catgtcagcg gttatagcgt ggcgcatcag gcgctggaag
    39301 aagaactggc cgagtggctg ggctattcgc gggcattgct gtttatctcc ggttttgccg
    39361 ctaatcaggc ggtcatcacc gcgatgatgg caaaagagga ccgtattgtt gccgaccggc
    39421 ttagccacgc ctccttgctg gaggctgcca gtttaagccc ggcgcagctt cgccgttttg
    39481 ctcataacga tgttactcat ctggcgcgcc tgcttgctgc ctcctgtccg gggcagcaac
    39541 tggtggtgac agaaggcgtg ttcagcatgg acggcgatag tgcgccactg gcggaaatcc
    39601 agcaggtaac gcaacagcac aatggctggt tgatggtcga tgatgcccac ggcacgggcg
    39661 ttatcgggga gcaggggcgc ggcagctgct ggctgcaaaa ggtaaaacca gaattgctgg
    39721 tagtgacttt tggcaaagga tttggcgtca gcggggcagc ggtgctttgc tccagtacgg
    39781 tggcggatta tctgctgcaa ttcgcccgcc atcttatcta cagcaccagt atgccgcccg
    39841 ctcaggcgca ggcattacgt gcgtcgctgg cggtcattcg cagtgaagag ggggatgctc
    39901 ggcgcgaaaa actggcggca ctcattacgc gttttcgtgc cggagtgcag ggttcgccgt
    39961 ttacgcttgc ggattcacgt agcgccatcc agccattgat cgtcggtgat aacagccgtg
    40021 cgttacagct ggcagaaaaa ctgcgccagc aaggttgctg ggtgacggcg attcgcccgc
    40081 caaccgtacc cgctggcacc gcgcggctac gcctgacctt aaccgccgcc catgaaatgc
    40141 aggatattga ccgtttgctg gagatgctgc atggcaacgg ttaataaaca agccattgca
    40201 gcggcatttg gtcgggcagc cgcgcactat gagcaacacg cagatctaca gcgccagagt
    40261 gctgacgtct tactggcaat gctcccacag cgtaaataca cccacgtact ggacgcgggg
    40321 tgtgggccag gctggatgag ccgccactgg cgagagcgtc acgcgcaggt gacggcgtta
    40381 gatctctcgc cgccaatgct tgttcaggca cgccagaagg atgccgcaga ccattatctg
    40441 gcgggagata tcgaatccct gccgttagcg actgcgacgt tcgatcttgc atggagcaat
    40501 ctcgcggtgc agtggtgcgg taatttatcc acggcactcc gcgagctgta tcgggtggtg
    40561 cgccccggag gcgtggtcgc gtttaccacg ctggtgcagg gatcgttacc cgaactgcat
    40621 caggcgtggc aggcagtgga cgagcgtccg catgctaatc gctttttacc gccagatgaa
    40681 atcgaacagt cgctgaacgg cgtgcattat caacatcata ttcagcccat cacactatgg
    40741 tttgatgatg cgctcagtgc catgcgttcg ctgaaaggca tcggtgctac gcatcttcat
    40801 gaagggcgcg acccgcgaat attaacgcgt tcgcaattgc agcgattgca actggcctgg
    40861 ccgcaacaac aggggcgata tcctctgacg tatcatcttt ttttgggagt gattgctcgt
    40921 gagtaaacgt tattttgtca ccggaacgga taccgaagtg gggaaaaccg tcgccagttg
    40981 tgcactttta caagccgcga aggcagtagg ttatcggacg gcaggttata aaccggtcgc
    41041 ctctggcagc gaaaagaccc cggaaggctt acgtaatagt gacgcgctgg cgttacagca
    41101 caacagcagc ctgcagctgg attacgcaac ggtaaatcct tacaccttcg cagaacccac
    41161 ctcgccgcac atcatcagcg cgcaagaggg caggccgata gaatcattgg taatgagcgc
    41221 cggattacgc gcgcttgaac aacaggctga ctgggtgtta gtggaaggtg ctggcggctg
    41281 gtttacgccg ctttctgaca ctttcacttt tgcagattgg gtaacacagg aacaactgcc
    41341 ggtgatactg gtagttggtg tgaaactcgg ctgtattaat cacgcgatgt tgactgcgca
    41401 ggcaatacaa cacgccggac tgactctggc gggttgggtg gcgaacgatg ttacgcctcc
    41461 gggaaaacgt cacgctgaat atatgaccac gctcacccgc atgattcccg cgccgctgct
    41521 gggagagatc ccctggcttg cagaaaatcc agaaaatgcg gcaaccggaa agtacataaa
    41581 ccttgccttg ttgtagctat cctgtatttg gttaaattgc gagcgagatc gcgtcttcga
    41641 ttgactgcaa tttaaccaat taaattctaa aataatcacg aaaaaaattt tacttccgcc
    41701 tcatgcggcg aatgtgggaa ttgcccaggc ggcgggggat aggggctgga gacagttatc
    41761 cactattcct gtggataacc atgtgtatta gagttagaaa acacgaggca agcgagagaa
    41821 tacgcggctt gcacgcgaat tggcgttaaa gacggctcaa agaaatatct tttatttttt
    41881 aactggttag ataaatgcaa tggcagtcac tgaacaggca tctcttgcca taaaact
//
LOCUS       DAPGWB010000019        41668 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.019, whole genome shotgun sequence.
ACCESSION   DAPGWB010000019 DAPGWB010000000
VERSION     DAPGWB010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 41668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41668
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.019"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(11..259)
                     /gene="hybG"
                     /locus_tag="RHX79_001065"
     CDS             complement(11..259)
                     /gene="hybG"
                     /locus_tag="RHX79_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation factor HybG"
                     /protein_id="HDV2196261.1"
                     /translation="MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADL
                     LGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA"
     gene            complement(272..613)
                     /gene="hypA"
                     /locus_tag="RHX79_001066"
     CDS             complement(272..613)
                     /gene="hypA"
                     /locus_tag="RHX79_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HDV2196262.1"
                     /translation="MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAV
                     RFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPICHGERLRVDTG
                     DSLIVKSIEVE"
     gene            complement(606..1094)
                     /gene="hybE"
                     /locus_tag="RHX79_001067"
     CDS             complement(606..1094)
                     /gene="hybE"
                     /locus_tag="RHX79_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-2 assembly chaperone"
                     /protein_id="HDV2196263.1"
                     /translation="MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSD
                     FTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGV
                     SQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGE
                     NA"
     gene            complement(1087..1581)
                     /locus_tag="RHX79_001068"
     CDS             complement(1087..1581)
                     /locus_tag="RHX79_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HDV2196264.1"
                     /translation="MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTA
                     GMELLGDMANRDHLIIADAIVSKKNTPGTMMILRDEEVPALFTNKISPHQLGLADVLS
                     ALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPRE
                     AIHD"
     gene            complement(1581..3284)
                     /gene="hybC"
                     /locus_tag="RHX79_001069"
     CDS             complement(1581..3284)
                     /gene="hybC"
                     /locus_tag="RHX79_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 large subunit"
                     /protein_id="HDV2196265.1"
                     /translation="MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEI
                     VKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTH
                     DHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVA
                     SGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNL
                     AVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRG
                     KGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHS
                     WYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRE
                     STQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNI
                     GKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGP
                     RNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV
                     L"
     gene            complement(3281..4459)
                     /gene="hybB"
                     /locus_tag="RHX79_001070"
     CDS             complement(3281..4459)
                     /gene="hybB"
                     /locus_tag="RHX79_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase cytochrome b subunit"
                     /protein_id="HDV2196266.1"
                     /translation="MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSD
                     LNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLG
                     GLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWK
                     VSLKRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAF
                     IMGFSIVIFEGSLVQAGLRGNGPDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLS
                     LAFAGDFYSVMFWIEVLLMLFPLVVLRVAKLRNDSRMLFLSALSALLGCATWRLTYSL
                     VAFNPGGGYAYFPTWEELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA
                     "
     gene            complement(4449..5435)
                     /gene="hybA"
                     /locus_tag="RHX79_001071"
     CDS             complement(4449..5435)
                     /gene="hybA"
                     /locus_tag="RHX79_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 operon protein HybA"
                     /protein_id="HDV2196267.1"
                     /translation="MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDS
                     TLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEE
                     NGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP
                     KYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRL
                     ALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPK
                     LDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES"
     gene            complement(5438..6556)
                     /gene="hybO"
                     /locus_tag="RHX79_001072"
     CDS             complement(5438..6556)
                     /gene="hybO"
                     /locus_tag="RHX79_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 small subunit"
                     /protein_id="HDV2196268.1"
                     /translation="MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVT
                     NPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENK
                     HNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAW
                     GGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKN
                     RPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQ
                     FCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSA
                     GAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE"
     gene            complement(6745..7032)
                     /locus_tag="RHX79_001073"
     CDS             complement(6745..7032)
                     /locus_tag="RHX79_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2623 domain-containing protein"
                     /protein_id="HDV2196269.1"
                     /translation="MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMY
                     EKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN"
     gene            complement(7151..8038)
                     /locus_tag="RHX79_001074"
     CDS             complement(7151..8038)
                     /locus_tag="RHX79_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HDV2196270.1"
                     /translation="MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTA
                     LALFDLLKPNYALATQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVV
                     VVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTKLM
                     NDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADV
                     AKIEAPLLLHFAELDTRINEGWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDK
                     SAADLAWQRTLKWFDKYLS"
     gene            8195..9235
                     /gene="gpr"
                     /locus_tag="RHX79_001075"
     CDS             8195..9235
                     /gene="gpr"
                     /locus_tag="RHX79_001075"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glyceraldehyde 3-phosphate reductase"
                     /protein_id="HDV2196271.1"
                     /translation="MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALES
                     QRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDM
                     WPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG
                     KALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVG
                     CIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQ
                     RGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTEELAQIDQHIAD
                     GELNLWQASSDK"
     gene            complement(9275..9769)
                     /locus_tag="RHX79_001076"
     CDS             complement(9275..9769)
                     /locus_tag="RHX79_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HDV2196272.1"
                     /translation="MERFLENAMYASRWLLAPVYFGLSLALVALALKFFLEIIHVLPN
                     IFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDA
                     TSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
                     RHNH"
     gene            9960..10844
                     /gene="yghA"
                     /locus_tag="RHX79_001077"
     CDS             9960..10844
                     /gene="yghA"
                     /locus_tag="RHX79_001077"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HDV2196273.1"
                     /translation="MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGS
                     GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA
                     VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN
                     VFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA
                     EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE
                     SSYVTAEVHGVCGGEHLG"
     gene            complement(11116..11541)
                     /gene="exbD"
                     /locus_tag="RHX79_001078"
     CDS             complement(11116..11541)
                     /gene="exbD"
                     /locus_tag="RHX79_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDV2196274.1"
                     /translation="MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVD
                     VKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTI
                     FFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK"
     gene            complement(11548..12282)
                     /gene="exbB"
                     /locus_tag="RHX79_001079"
     CDS             complement(11548..12282)
                     /gene="exbB"
                     /locus_tag="RHX79_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HDV2196275.1"
                     /translation="MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSK
                     SVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSD
                     DNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIA
                     QTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLL
                     LQSRDLDLEASAAAHPVRVAQKLRAG"
     gene            12534..13721
                     /gene="metC"
                     /locus_tag="RHX79_001080"
     CDS             12534..13721
                     /gene="metC"
                     /locus_tag="RHX79_001080"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HDV2196276.1"
                     /translation="MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKH
                     ATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCALFPCGAAAVANSILAFVEQGD
                     HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSIT
                     MEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDA
                     MIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEW
                     LAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLSNEELANYLDNFSLF
                     SMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA
                     RIV"
     gene            13861..14520
                     /locus_tag="RHX79_001081"
     CDS             13861..14520
                     /locus_tag="RHX79_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV2196277.1"
                     /translation="MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLP
                     ASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGW
                     LAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLS
                     GLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCN
                     A"
     gene            complement(14560..15459)
                     /gene="yqhC"
                     /locus_tag="RHX79_001082"
     CDS             complement(14560..15459)
                     /gene="yqhC"
                     /locus_tag="RHX79_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001407451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator YqhC"
                     /protein_id="HDV2196278.1"
                     /translation="MKREEICRLLADKVNKLKIKENSLSELLPDVRLLYGETPFARTP
                     VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN
                     VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG
                     KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN
                     MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR
                     EFKRYFGVTPGEDAARMRAMQGN"
     gene            15653..16816
                     /gene="yqhD"
                     /locus_tag="RHX79_001083"
     CDS             15653..16816
                     /gene="yqhD"
                     /locus_tag="RHX79_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HDV2196279.1"
                     /translation="MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKT
                     GVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTK
                     FIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDK
                     QAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAE
                     GILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAM
                     HGLDHAQTLAIVLPALWNEKRETKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFF
                     EQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR"
     gene            16921..17748
                     /gene="dkgA"
                     /locus_tag="RHX79_001084"
     CDS             16921..17748
                     /gene="dkgA"
                     /locus_tag="RHX79_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgA"
                     /protein_id="HDV2196280.1"
                     /translation="MANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRS
                     IDTAAAYKNEEGVGKALKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYID
                     LYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQ
                     IELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVI
                     RWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG"
     gene            17948..18874
                     /locus_tag="RHX79_001085"
     CDS             17948..18874
                     /locus_tag="RHX79_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjP/YqhG family protein"
                     /protein_id="HDV2196281.1"
                     /translation="MKIILLFLAALASFTVHAQPPSLTVEQTVRHIYQNYKSDATAPY
                     FGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTD
                     ADHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLA
                     ALASLQKEQPEAFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDM
                     QIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQR
                     REGKWEIADFIRPNSGSLLKQIEAKTAARLKQ"
     gene            18925..19182
                     /gene="yqhH"
                     /locus_tag="RHX79_001086"
     CDS             18925..19182
                     /gene="yqhH"
                     /locus_tag="RHX79_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YqhH"
                     /protein_id="HDV2196282.1"
                     /translation="MKTIFTVGVVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLE
                     QDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE"
     gene            complement(19225..21444)
                     /locus_tag="RHX79_001087"
     CDS             complement(19225..21444)
                     /locus_tag="RHX79_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgiQ family radical SAM protein"
                     /protein_id="HDV2196283.1"
                     /translation="MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDS
                     CDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFG
                     VTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
                     GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIR
                     DVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA
                     VTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRY
                     VWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSF
                     CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE
                     QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI
                     KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
                     FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYK
                     SEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE
                     EMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR"
     gene            complement(21555..22967)
                     /gene="ftsP"
                     /locus_tag="RHX79_001088"
     CDS             complement(21555..22967)
                     /gene="ftsP"
                     /locus_tag="RHX79_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsP"
                     /protein_id="HDV2196284.1"
                     /translation="MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRR
                     GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMT
                     VAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGM
                     WLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ
                     SPYVEVSRGWVRLRLLNASNSRRYQLQMSDGRPLHVISGDQGFLPAPVSVKQLSLAPG
                     ERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD
                     SLPMRLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADE
                     PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNS
                     QTLEMADRGSIGQLLVNPVP"
     gene            complement(23042..23779)
                     /gene="plsC"
                     /locus_tag="RHX79_001089"
                     /gene_synonym="parF"
     CDS             complement(23042..23779)
                     /gene="plsC"
                     /locus_tag="RHX79_001089"
                     /gene_synonym="parF"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HDV2196285.1"
                     /translation="MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGR
                     LAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIP
                     FFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK
                     TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELA
                     AHCRSIMEQKIAELDKEVAEREAAGKV"
     gene            complement(24013..26271)
                     /gene="parC"
                     /locus_tag="RHX79_001090"
     CDS             complement(24013..26271)
                     /gene="parC"
                     /locus_tag="RHX79_001090"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HDV2196286.1"
                     /translation="MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRR
                     IVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDG
                     QGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPAR
                     LPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTE
                     AEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRN
                     KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGL
                     DGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEI
                     IRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGI
                     LASERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMG
                     WVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQ
                     GEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITL
                     PENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAAHG
                     EDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEID
                     SPRRASSGDSEE"
     gene            complement(26817..27299)
                     /locus_tag="RHX79_001091"
     CDS             complement(26817..27299)
                     /locus_tag="RHX79_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV2196287.1"
                     /translation="MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKET
                     GLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVA
                     RHVGELDDISHTIWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA
                     "
     gene            complement(27352..27744)
                     /gene="ygiW"
                     /locus_tag="RHX79_001092"
     CDS             complement(27352..27744)
                     /gene="ygiW"
                     /locus_tag="RHX79_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB fold stress tolerance protein YgiW"
                     /protein_id="HDV2196288.1"
                     /translation="MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNG
                     SVTTVESAKSLRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPK
                     DTVEIQGEVDKDWNSVEIDVKQIRKVNP"
     gene            27896..28555
                     /gene="qseB"
                     /locus_tag="RHX79_001093"
     CDS             27896..28555
                     /gene="qseB"
                     /locus_tag="RHX79_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator QseB"
                     /protein_id="HDV2196289.1"
                     /translation="MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAP
                     YDAVILDLTLPGMDGRDILREWREKGQREPVLILTARDALEERVEGLRLGADDYLCKP
                     FALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLEL
                     LMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGE
                     K"
     gene            28552..29901
                     /gene="qseC"
                     /locus_tag="RHX79_001094"
     CDS             28552..29901
                     /gene="qseC"
                     /locus_tag="RHX79_001094"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_306641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     QseC"
                     /protein_id="HDV2196290.1"
                     /translation="MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELF
                     DTQLMLFAKRLSTLDLNEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDG
                     DNGEDIPYSYQREGFADGQLVGDKDQWRFVWMTSPDGKYRIVVGQEWEYREDMALAIV
                     AGQLIPWLVALPIMLIIMMVLLGRELAPLNKLAQALRMRDPDSEKPLNATGVPSEVRP
                     LVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKAL
                     LQLHYGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKID
                     VRLTLNAHGIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVIDVTLNADNFIVRDNGPGV
                     TPEALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW"
     gene            complement(29947..30279)
                     /locus_tag="RHX79_001095"
     CDS             complement(29947..30279)
                     /locus_tag="RHX79_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2645 family protein"
                     /protein_id="HDV2196291.1"
                     /translation="MLKHKIQTIFEALLYIMLTYWLIDAFFAFNKYDWMLESGDNICS
                     IPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMREMFEFWVYVFSLGICLVCGWWLF
                     WGRFIFCY"
     gene            30598..31179
                     /gene="mdaB"
                     /locus_tag="RHX79_001096"
     CDS             30598..31179
                     /gene="mdaB"
                     /locus_tag="RHX79_001096"
                     /EC_number="1.6.5.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase MdaB"
                     /protein_id="HDV2196292.1"
                     /translation="MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRA
                     DSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRK
                     DPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGM
                     EPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG"
     gene            31210..31524
                     /locus_tag="RHX79_001097"
     CDS             31210..31524
                     /locus_tag="RHX79_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HDV2196293.1"
                     /translation="MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMV
                     DCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQP
                     GI"
     gene            complement(31572..33464)
                     /gene="parE"
                     /locus_tag="RHX79_001098"
     CDS             complement(31572..33464)
                     /gene="parE"
                     /locus_tag="RHX79_001098"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HDV2196294.1"
                     /translation="MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV
                     DEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSN
                     KNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRN
                     TGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDG
                     LNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQG
                     GTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTK
                     ERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLT
                     SGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV
                     SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVK
                     HFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKPNVQRFKGL
                     GEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDMLLAKKRSEDRRNWLQEKGD
                     MAEIEV"
     gene            complement(33493..34074)
                     /gene="yqiA"
                     /locus_tag="RHX79_001099"
     CDS             complement(33493..34074)
                     /gene="yqiA"
                     /locus_tag="RHX79_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase YqiA"
                     /protein_id="HDV2196295.1"
                     /translation="MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP
                     SDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDY
                     LGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA
                     SCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL"
     gene            complement(34074..34901)
                     /gene="cpdA"
                     /locus_tag="RHX79_001100"
     CDS             complement(34074..34901)
                     /gene="cpdA"
                     /locus_tag="RHX79_001100"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HDV2196296.1"
                     /translation="MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQA
                     VLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMY
                     SALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTL
                     LLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLL
                     ATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY"
     gene            complement(34926..35348)
                     /locus_tag="RHX79_001101"
     CDS             complement(34926..35348)
                     /locus_tag="RHX79_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1249 family protein"
                     /protein_id="HDV2196297.1"
                     /translation="MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQ
                     YRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARY
                     DYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY"
     gene            complement(35349..35978)
                     /gene="nudF"
                     /locus_tag="RHX79_001102"
     CDS             complement(35349..35978)
                     /gene="nudF"
                     /locus_tag="RHX79_001102"
                     /EC_number="3.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose diphosphatase"
                     /protein_id="HDV2196298.1"
                     /translation="MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQ
                     MSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEG
                     ESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLA
                     DENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEWA"
     gene            36183..37664
                     /gene="tolC"
                     /locus_tag="RHX79_001103"
     CDS             36183..37664
                     /gene="tolC"
                     /locus_tag="RHX79_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane channel protein TolC"
                     /protein_id="HDV2196299.1"
                     /translation="MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAA
                     DRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSK
                     WRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLD
                     QTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAAL
                     NVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTAST
                     GISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGA
                     SEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIV
                     DVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPE
                     NVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN"
     gene            37812..38483
                     /locus_tag="RHX79_001104"
     CDS             37812..38483
                     /locus_tag="RHX79_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417509.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 family protein"
                     /protein_id="HDV2196300.1"
                     /translation="MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLAGCEKSDETV
                     SLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPA
                     QAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
                     TDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSS
                     RSMGG"
     gene            38489..39649
                     /locus_tag="RHX79_001105"
     CDS             38489..39649
                     /locus_tag="RHX79_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HDV2196301.1"
                     /translation="MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQ
                     VEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLD
                     LAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
                     RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQ
                     FTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM
                     FPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMI
                     VQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFIE"
     gene            complement(39687..40475)
                     /gene="ygiD"
                     /locus_tag="RHX79_001106"
     CDS             complement(39687..40475)
                     /gene="ygiD"
                     /locus_tag="RHX79_001106"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001356237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HDV2196302.1"
                     /translation="MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVV
                     VSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPVLAQHLVELLAPVSVT
                     LDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIML
                     VASGNVVHNLRTVKWHGDSSPYPWAMSFNEYVKANLTWQGAVEQHPLVNYLDHEGGAL
                     SNPTPEHYLPLLYVLGAWDGQEPITIPVDGIEMGSLSMLSVQIG"
     gene            40618..41391
                     /gene="zupT"
                     /locus_tag="RHX79_001107"
     CDS             40618..41391
                     /gene="zupT"
                     /locus_tag="RHX79_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HDV2196303.1"
                     /translation="MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIM
                     LLISLMEMLPAALAAEGMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLP
                     KSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPV
                     YAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVD
                     ELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG"
     gene            complement(41449..41619)
                     /locus_tag="RHX79_001108"
     CDS             complement(41449..41619)
                     /locus_tag="RHX79_001108"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196304.1"
                     /translation="MFIAWYWIVLIALVVVGYFLHLKRYCRAFRQDRDALLEARNKYL
                     NSTREETAEKVE"
BASE COUNT        10311 a        11155 c        10450 g         9752 t
ORIGIN      
        1 aagctaatca tcacgcgctg gtaatgtcgt aatccatttg gcgcagtgcg tctaatgtgg
       61 ctttggcttc atcttcgtcg atgatgctca tggcaaatcc gacgtgtacc agcacccact
      121 ggcccagcag atcggcaggg ttaccttcac aaatcagggc gatattcacg tcgcgcttga
      181 taccacatac ttcaacctgc gcaagctggt gaatatcttc accgacagcc agcacctggc
      241 ctggaacgcc aatacacatt attaactccg gttattcaac ttcaatactt ttgacgatca
      301 gcgaatcgcc ggtatcgaca cgcaaccgct cgccatgaca gatcggacac tgcgcatcgt
      361 gctgatgaat ctccaccacc tggctgcaat cccagcacca ggcctgggcg ggtttataga
      421 cgatatgtaa atcgcaccct tgcgccaccg ttccgtggca gacaatttca aaactaaaac
      481 ggacggcgct ctcctcaacg caggagagcg cgccaatttc cagccacacg gcggtgacgc
      541 gcttaacatc gtgctgctcc gcctgccgtt ggataatttc aacggcgctc tggcaaagcg
      601 acaactcatg cattttcgcc actcctgcga ccaaacagca gggcgcgacg ccctgcgtgt
      661 ggtacatccg gattcgtgac tggcagcgaa aggatcattc gtgcgcagtc atccgtcagg
      721 cgttggccct cttcaatcga catgctgtgc gaaagcggcg acatcagcga acaggagaga
      781 tattgcgaaa caccgtccag ttcgccaacg gtaaaggtca tagtgccata cggcagttgc
      841 agaccaattt tttcactcac tttgcgcagc ggccagagtt gatccgggcc ggggaagata
      901 actgcactca gcatccacgg ggtgatcaca caccccgtcc actgaccttc gaacagcgta
      961 aaatcagaaa catacaccgg cattgaagga tgcagaaaag agagatcgtg catcgaacgc
     1021 cgggcaattt cttcaaacgc tgcctgtact tgcgccttcg gggaggtctg gaaacctgct
     1081 atctcttcag tcatgaatcg cctcccgtgg gatggcttcc acgccagatt cacgcagcgc
     1141 agccagaacc tgctcaagcg caggttcaat cattgcttca accgtcggcg ttaagccgat
     1201 gtgtggctcc agcgattccg ggatcacgcc gaccagggtc agctttttcg gaaactcacc
     1261 ggtgaagcgc agggccgaca atacgtcggc caggccaagc tgatgcggag agattttgtt
     1321 ggtaaacaac gccggaactt cttcatcccg caggatcatc atcgttcccg gcgtgttctt
     1381 tttcgacaca atggcatccg caataatcag atgatcgcga tttgccatgt cgccaagcag
     1441 ctccattccc gccgtgccgc catcgaggat ctcaacataa tccggcagaa tgtatcgttg
     1501 ctctaacgct tcgacaatcc gcacaccgat ggcttcatcg gtcagcaaaa tattgccgac
     1561 ccctaagact aaaatacgca ttacagaacc ttcactgaaa ccacttcgtt gccgtcggca
     1621 tccactacgt gtaccgcaca ggccatgcac gggtcgaagg agtgaatggt acgcaccact
     1681 tccagcggtt tattcggatc agcaaccggt gtacccacca gcgactgctc gtaaggaccg
     1741 acgtcatcat tgaagttacg cggaccagag ttccaggttg atggaacaac tgcctggtag
     1801 ttgctgatga taccgtcttt gatcaccatc cagtgagaga gcataccgcg cggcgcttcg
     1861 aggaagccaa cacctttgaa ctcacccgtt gccggaatgt tcggtttcac aaaggtggtg
     1921 tgatcgcctt tgccgatatt ggtgatcagt gcactgtatt ggttttgcag gatatcctgc
     1981 aattcacagc agtgaacggt acgaccaata atacggccca gcgtggagtg cagctgtgcc
     2041 acttccagcg tgttgccagt cagtttctga taaatcgcaa cgatttcatt cagtttgttc
     2101 tgggtagatt ctcgacctgc cgccagtttc accagcatat tagccagcgg acccacttct
     2161 accgttttgc cgtagaaagt cggtgatttc acccaggaat atttcccgtc gtcagaccaa
     2221 ccatcataag ccggaatggt ggtaccttcc cacggcgcct gtggcgcttc gtctttatac
     2281 caggagtgct tcgcgctttc ctgaatgcct ttgatcaggt attcatcgga atgagaagtg
     2341 atcggacgat acgaggacag atccgcattc tcaatgtagc cgcccgggaa caggaagctg
     2401 ccgtttttgc tgtcggtcgg gaattccggc acgctcaggt agttcaccgc acctttaccg
     2461 cgcgtcagcc attccgggta gaacgcggcg ataaccgcgg tatcaacctt ataaacctgc
     2521 tcaacaaagt cgctcagttt gtcgatgaaa gacttgatgt acatcaggcg ctcaaggttc
     2581 aacacgccca acccgtcgag gttgattggg ttcgcgacac cacccactgc caggttctga
     2641 atgtgcggcg ttttaccgcc cagcagcgcc acgacgcggt tagcgtcacg ctggcactcc
     2701 agcgcctgca ggtagtgcgc taccgcaatc aggttcactt ccggcggcag tttcatcgct
     2761 gggtgacccc agtagccatt agcgaaaata cccaactgac cgctggcaac cagatctttg
     2821 atcttgttct gaactttggt gaactcttcc gggctgttca gatgccaggt cgaaacgcct
     2881 ttcagcattt cggaggcttt ggttgggtca gcttgcagtg cagaagtgat gtccacccag
     2941 tccagcgccg aaagctgata gaaatgaacg atatggtcat gcgtggtgtg cgcagccaga
     3001 atgatgttac ggatgtattg cgcgttaacc ggaacgtcga tattcagcgc actttctgcc
     3061 gcacgaacgg aagacagcgc gtgagtggta gtacatacgc cacagatacg ttgcacaatc
     3121 atccatgcat cgcgcggatc gcggtttttc acgatctctt ccatgccgcg ccacatggta
     3181 ccggaagccc atgctttcga aacgacgcca ttttcgattt cgcaatcgat gcgtaaatgc
     3241 ccctcaatac gggttaccgg atcaatagta attctctggc tcatgctttg ctcgcctcat
     3301 gacgattatg atcgttttgt tttaaaggag gaagtatcgg cagtagacga atgagtacga
     3361 tgtaagcgca aatctcaata gccacaaaac caatagaaat caacagttct tcccaggtcg
     3421 ggaagtaggc gtaaccgccg cccgggttga atgccaccag cgaataggtc agacgccagg
     3481 ttgcacaacc taacagtgcg ctcagtgctg acaggaacag catgcgggaa tcattacgca
     3541 gcttcgccac acgcagaacc accagcggga agagcatcag caggacttca atccagaaca
     3601 tcacggagta gaagtcaccg gcaaacgcta acgacagctt gtcgcgatag ataagctcgc
     3661 caaagcgcag cacgatgaaa atcgccagca acacactgat ggtgttggtc agcttgacga
     3721 acagactctt ttcatccgga ccgttgccac gcagacccgc ctgcaccagc gaaccttcaa
     3781 agatgacaat cgagaagccc atgatgaacg ccgtcagcag cgagaacagc ggcaacattt
     3841 catagctctg ccacaacgga tgcaccttgt agcccgccga gatcatcagt gaccccattg
     3901 aagactggtg catggtcggc aacagcgcgc caagtgcaat gatgaagaac atcaccttgt
     3961 tcagacgctt gagagaaacc ttccagccca gacgttcaaa cagtgccgga gcaaactcca
     4021 gtgccatcac gccgatatag atggtcatac agaccgccgt ctcgaacagt accgagttca
     4081 cgttgaagtg acccggaatg tagaagtacg gcaggttcca gtagcgaccc acgtcgatag
     4141 tgatcgacaa gccccccagt gagtaaccaa acagactcgc caacagcgcc ggacgcacca
     4201 gcggatggta ttgcccacgg ttaaagacgt ataccgccca cgccagcgcc cagccgccac
     4261 aggcaaagcc ggtaccaatc agcaggtcaa acgcgatcca cacgccccac gggaagccgc
     4321 cgttcaggtc agagacagag cccagaccga acaccagacg cttcacaatc aggagcatac
     4381 agatgacgat taacggtcca aaaatcatga ccggtttact gatgattttg ccgcccagcg
     4441 gttgtggatc atgactcatg atcgtctcct ccgtcgtgat ggtcgttttt ggtgttgcga
     4501 cgaaccagca cggttaagcc cgccagcaca gccagtggta gcatcatgcc tttatacagg
     4561 gtgtgttgaa tattttcgga acgcgcaccg gtagaaagat cgtccagttt cggcaggtcg
     4621 agattttcat aaggcacacc cgtcagtacc agaacctgag taccgccgcc ctctttctcg
     4681 ccgtacagat gcggataata tttcggcacc gtatgcaggt aagtgtcgcc agatttcagc
     4741 gtctgacgcg gatagtggta ttcgctgcca ggcttcagcg ccagacgttt tttcgcctcc
     4801 gccatcagct cttcacgcgt accaaaaatt accgcgcccg ccgggcacac ttctacgcag
     4861 ccaggcaaac cgcctttatc gagacgttcc acacctttct ggttgcacaa ctcgcactta
     4921 tgcagcgcac caaacgggtt gttgtagtcg tacttcggca cgttgtatgg gcaggcgacc
     4981 atgcagtaac ggcaaccggt gcacacatct ttgtcgtaat ggacaatgcc ggttttcgga
     5041 tcttttttca gcgcagagac cgggcacaca gagacacagt tcggatcgac gcagtgcata
     5101 cactgtttct taatgtacgc gtagccgttc tcctcctggt ctttgttgac ccctgtgccg
     5161 ctggtccaca cctgaatgat gttattggta tacggcgaca gtttgtcgtt gttcgaccag
     5221 gtctgttccc cttgcgggtt acgttcaggg aagttgatat cctgacactt ggtgacgcaa
     5281 gcctggcagc ctacgcacaa ggtcgagtcg tacaacatcc ccagcgatcc cggaattggc
     5341 gggcggtttt cagcagccgc atgactgaca gacggcagcg cgcccgtcag caatgccccg
     5401 caggaggctg ctttaataaa attacgtctg ttcacggtta ttctccccgt gagtcagcgt
     5461 tatctttctt ttgctgacga cccagttcac gcaccgccat cacgctgaca ccggcaacca
     5521 gcccaaccac accgccgagc aaaccaatag cgcctgcaga gacgttgccg ccctctttag
     5581 cgttaacatc cggtttctgt gaacgcggag tctgattttc gacgttggca agctgatgga
     5641 tgcctttatg gaagccgata ccttcttcgt tacagccata gcatgggtga ccaatcgcta
     5701 ccggccacac gccgccaaca tcgcagaatt gcagcgttga gcagttgccg taagtttctg
     5761 gccctttaca gccgaggtgg tacaggcacc agccttcacg gtggccttca tcaccgaact
     5821 ctttggcaaa acgaccagca tcgaagtgcg ggcgacgttc gcagtgttcg tgaatcagac
     5881 ggccataggc gaaggtcgga cgatttttgt catccagttt cggcggtttg ccgtaagtga
     5941 tgatgtgcgc aacggtcgcg aggaagttgt gcgggttcgg cgggcagccc ggaatattga
     6001 taacggtttt gcctggcaga acttcttgca ggctgactgc gccagttggg ttaactccag
     6061 ctgcggcaac accgccccac gcagagcagg aaccgatagc gataatcgct gctgcgcctt
     6121 ctgccgcttt gcggatgtga tccacaatcg gctcaccagc aaccatgcaa taaataccgt
     6181 tatcttttaa tgggatggaa ccatccacaa ccaacacata ctgccctttg tacttctcaa
     6241 gtgcgttatg tttgttctct tcgacctgat gaccgaaggc ggcggaaagc acttcgtgat
     6301 actccagaga gatagtctcc agcacgaggt tttctaccgt tggatgcgtt gcacgaagca
     6361 gagattccgt acaaccggtg cactcctgcg cgccaatcca gataactggc ggacgctgcg
     6421 ggttagtaac cgattcggcc atctctgcag cggctttgct acttaacccc atggtggcgg
     6481 ctaatgctgc acaaagcttc atgaaatcac gacggttaat gccgtgagaa tggatgaggg
     6541 tgttatctcc agtcatttat agttattccg ttgcgaagac ctggcatata ttttgcctca
     6601 atcgcaaaat caataatgcg atcgatgcgc catttaccac acatttatta tggttatcga
     6661 tatcatgata ctgcggcggg gcgctaaaac gaagggaaga agcattagtg taattaatta
     6721 aagcaagata atacgtatgt ttgatcaatt ttcgaggcga taaccggcca taaaaaagcg
     6781 caacgtagaa caggaattat tctcacgaaa gaaatccatt accatctctt tatccagtcc
     6841 atagcggcgc gtcagaatac ccgcttccca ggcgctaagc tggcgatctc cggtcttttc
     6901 gtacatccgg tgtgagtagc ctaatacaaa accgcgttta taatcggcac agaattttgt
     6961 cacattaacc gcactgtcgg catgcgttgc ttttaatccc gccattaagc ctttaccaaa
     7021 atggttattc atcgttcacc tcattcgcta tatatcgcca tatatagcga tattttaggc
     7081 aaagaacgac ttttgcgcac gctatttttt catgcttgtt taagacgtaa tccagtaaga
     7141 gataaaccta tcaggagaga tatttatcga accatttcag tgtcctttgc caggcaagat
     7201 cggcggcaga tttgtcataa cggggcgtgg aatcattatg gaatccgtga ttaacccccg
     7261 gatagatata cgcctcataa accttattat tggctttcaa cgccgcctcg taagcaggcc
     7321 agccctcgtt gattcgggtg tccagttccg cgaagtggag tagtaaaggc gcttcaatct
     7381 tcgccacatc ggcagtgggt gcctgacgac cataaaacgg caccgcgcag gccagttccg
     7441 gatacgcgac agccgccgcg ttcgatacgc caccgccata gcaaaatccg gtaataccca
     7501 ctttgcctgt cgcttgcgga tagcgttgca taaactcaat tgcggcaaag aaatcattca
     7561 tcagtttggt tggatcaacc tgctgttgca gctcacgacc tttatcatca tttcccggat
     7621 aacctccaac ggaacttaag ccgtcaggtg ccagggcgat ataccccgcc ttcgccactc
     7681 gccgtgccac atcttcgata tacggattca gtccacgatt ctcatgcacc accaccacgg
     7741 ctggcgtttt gccgctcatt tttgcgggtt tcaccagata accccgtacc tcgccgtgac
     7801 catttggcga aggatacgtg atgtactcag caacaatctc cgggtcggta aactctacct
     7861 gagtcgccag cgcataattt ggcttgagca aatcaaacaa cgctaatgcc gtcatcccgc
     7921 ccaccgcata cttcgccgca aggttgagga actcacgttt cgagattttc ccgtgagcgt
     7981 aatagtcgta gtaatccaac aactcttgtg ggaaatcttt ggcggttaaa cgcggcatcg
     8041 ttgcactcct caactggtgt ttttttaagc aaagcataag cacgtgtttt tgcccaattt
     8101 ttcgtcactc tgtgagccag actacgggat acgcgctggc gaatcgctaa actagaaaca
     8161 ttgtttcgaa attgaacggt ggaaaggaga ggtcatggtc tggttagcga atcccgaacg
     8221 ttacgggcag atgcaatacc gctattgcgg aaaaagcggt ttacgcctgc ccgcgttatc
     8281 gctcggttta tggcacaatt tcggtcacgt taacgcgctg gaatcacagc gtgcgatcct
     8341 gcgtaaagcg tttgatttgg gcattacgca ctttgattta gccaacaatt acgggccgcc
     8401 tccaggaagc gcagaagaga actttggtcg cctgctgcgg gaggattttg ccgcttatcg
     8461 cgatgaactg attatctcta ccaaggctgg ctacgatatg tggcccggcc cttacggctc
     8521 tggcggttca cgtaaatacc tgctcgccag cctcgaccaa agcctgaagc gtatggggct
     8581 tgagtatgtc gatatctttt actctcatcg cgtcgatgaa aatacgccga tggaagaaac
     8641 cgcctctgcg ctggctcatg cggtacaaag cggtaaggcg ctgtatgtcg ggatctcctc
     8701 ttactcgcca gagcggacgc aaaaaatggt cgagttgctg cacgagtgga aaattccgct
     8761 tttaattcat caaccttcgt acaatttact gaaccgctgg gtggataaaa gcggcctgct
     8821 ggataccctg caaaataacg gcgtgggctg tattgccttt actcctctgg ctcagggatt
     8881 gctgaccgga aaatatctca acggcattcc gcaagattca cggatgcatc gtgaagggaa
     8941 taaagttcgt ggtctgacgc cgaaaatgct taccgaagcc aacctcaaca gcctgcgctt
     9001 attgaatgaa atggcacagc agcgtggaca atcaatggcg caaatggcgt taagctggtt
     9061 gctgaaagat gatcgcgtga cgtcggtatt gattggtgcc agccgcgcgg agcaactaga
     9121 ggagaacgtg caggcgctga ataatctgac atttagcacc gaggagctgg cgcagattga
     9181 tcagcatatc gccgatggcg agctgaatct gtggcaggcg tcgtccgata aatgacctgt
     9241 taataacggg cgcgcgaacc gcgcccgaat cagatcagtg attatgacga gtcagtcggt
     9301 caagatagcc catcacaaat gcagaaagca caaacgtcag atggataatg acgtaccaca
     9361 tcagtttgtt atccgggaca tttttcgcat ccataaagac gcgcagtagg tgaatggaag
     9421 aaattgccac aatcgacgct gctactttgt ttttcagcga cgttgcgtcc attttcccca
     9481 gccagttcag cttctctttg ttctcggaga tatccagctg tgagacgaaa ttctcataac
     9541 cggaaaacat caccatcacc agcaaaccgc caaccagcgt catatccacc agcgacagca
     9601 acacgaggat caaatctgat tccgccatcg agaagatatt cggcagtacg tgaataatct
     9661 ccaggaagaa cttcagcgcc agggcaacta acgccagcga aaggccaaag tacacggggg
     9721 caagcagcca gcgagaagca tacattgcat tttcaagaaa acgttccata cattcctgtc
     9781 gtgtagttaa aacgggcaac agtatatcgc aattgagtaa acagcacgca acagcaaatc
     9841 aacatatacg ttaaaccttt gtcgcataat tctgaggttt agggatcttc ctggttccct
     9901 tatcaacgca tcgagaacgt ctacccttaa aggacgttga acctgaaggg agaaaaacga
     9961 tgtctcattt aaaagacccg accacgcagt attacactgg tgaatatccc aaacagaaac
    10021 aaccgacgcc aggcatccag gcgaagatga caccggtacc ggattgcggc gagaaaacct
    10081 atgttggtag cggtcgcctg aaagatcgta aagcactggt gacagggggc gattccggaa
    10141 taggtcgcgc tgccgccatc gcttacgcgc gtgaaggggc tgacgtggcg atcagttatc
    10201 ttcccgtgga agaagaagac gctcaggatg tgaaaaagat cattgaagaa tgcggacgca
    10261 aagccgttct gctgccaggc gatttaagcg atgagaaatt cgcccgttcg ctggttcacg
    10321 aagcgcataa ggcgttaggc gggctggata ttatggcgct ggtcgccggg aaacaggttg
    10381 ccattcctga tattgcagac ctcaccagcg aacagtttca aaagaccttt gccattaacg
    10441 ttttcgcgct attctggcta acccaggaag cgatccccct gctaccgaaa ggtgcaagta
    10501 tcatcaccac ttcgtcaatc caggcatacc agccaagtcc gcatttactg gactatgcgg
    10561 ctacgaaggc ggcgattctg aactacagcc gtggcctggc aaaacaggtc gcggagaaag
    10621 gtattcgggt gaatattgtc gcgccaggcc cgatctggac agcactgcaa atttccggcg
    10681 gacaaacgca ggataagatc ccgcagtttg gtcagcaaac gccgatgaag cgtgcggggc
    10741 aaccggcgga actggcccct gtatatgttt atctggcaag tcaggagtcg agctacgtca
    10801 ccgcagaagt gcacggtgtg tgcggcggcg agcatttagg ttaaaaaaat gcccggttgt
    10861 gaaaagcaac cgggcatcat tgtgaattca ctcttacctg atgtggcgaa aacgccttat
    10921 ccgcctacaa acgcatgaag attcaacatg ttgcaataga ttttgtaggc ctgataagcg
    10981 tagcgcatca ggcattgagc acctaatgcc ggatgcgtcg tgaacgcctt atccggccta
    11041 caaacgcacg aagattcaac ctgttgcaat agattttgta ggcctgatga gcgtagcgca
    11101 tcaggcaatt ctactttact tcgctttggc ggtttcttcg ccgaccagac ctatcttcag
    11161 gtaacccgcc tgatgcagcg tatccattac cttcatcaac gtctcgtaat cgacggtttt
    11221 atccgctcgg aagaagatgg tggtgtcttt cttgccttcg gttaacgcat tcagcgccgt
    11281 aatcattgtt tcatcggtga ccggatcgtt accgataaac attgagttat ctgccttcac
    11341 cgacagataa accggttttt ccgggcgcgg ctgcggcgtg ctggtagaag caggcaaatt
    11401 caccttcaca tctaccgtcg ctaacggtgc cgccaccata aagataatca gcagaaccaa
    11461 catcacgtcg ataaacggcg tcacgttgat atcatgcatt tcgccgttat catcgaggtt
    11521 ttcgttaaga tgcattgcca tcggacatta tcctgcgcgt aatttttgtg cgacacgaac
    11581 cggatgcgca gcggcgctgg cttccagatc caggtcacgg ctttgcagca acaatacctg
    11641 cgctgcaaca tcacccagca tcgctttaaa gccgccaatc tggcgtgcaa atacgttata
    11701 gataacgacc gcaggaatcg ctgccacgag gccgattgcc gttgctaaca gagcttctgc
    11761 gatacccggc gcaacgactg ccaggttagt ggtctgcgtt tgcgcgatac caataaagct
    11821 gttcatgatg ccccagaccg taccaaacag accaacgaac ggagaaatcg cgccgatggt
    11881 tgccagatag ccgttaccgc ggcccatttg acgacccact gcggcgaccc gacgctccag
    11941 acggaagctg gtacgttctt taataccttc gttatcgtcg ctgccttctg acagttccag
    12001 ctcattctgc gcttcattga gcaaatgcag gcttaagctt ttgctaccaa aatcagcggc
    12061 gatatcgttg gcctggttta aggaacgcgc ttcagccagc agttgctgct cgcgcttaag
    12121 gcgacgcttc tgattgaaga actctacgct cttactgaag aagattgccc aggtgactac
    12181 ggaggccaaa ataagcccaa tcatcacgca cttaacgaca atatcggcgt gctgatacat
    12241 accccagacg gaaaggtccg tctgcattaa attattaccc actgtgtatc tccaggacgc
    12301 aagtcacaaa atctgcgcat aataatatca aaatgacgtc gaattgatag tcgttctcat
    12361 tactatttgc atactgccgt acctttgctt tcttttcctt gcgtttacgc agtaaaaaag
    12421 tcaccagcac gccatttgcg aaaattttct gctttatgcc aattcttcag gatgcgcccg
    12481 cgaatattca tgctagttta gacatccaga cgtataaaaa caggaatccc gacatggcgg
    12541 acaaaaagct tgatactcaa ctggtgaatg caggacgcag caaaaaatac actctcggcg
    12601 cggtaaatag cgtgattcag cgcgcttctt cgctggtctt tgacagtgtg gaagccaaaa
    12661 agcacgcgac gcgcaatcgc gccaatggcg agttgttcta tggacggcgc ggaacgttaa
    12721 cccatttctc cttacaacaa gcgatgtgtg aactggaagg tggcgcaggc tgcgcgctat
    12781 ttccctgcgg ggcggcagcg gttgctaatt ccattcttgc ttttgtcgaa cagggcgatc
    12841 atgtgttgat gaccaacacc gcctatgaac cgagtcagga tttctgtagc aaaatcctca
    12901 gcaaactggg cgtaacgaca tcgtggtttg atccgctgat tggtgccgat atcgttaagc
    12961 atctgcagcc aaacactaaa atcgtgtttc tggaatcgcc aggctccatc accatggaag
    13021 tccacgacgt tccggcgatt gttgccgccg tgcgcagtgt ggtcccggat gccatcatta
    13081 tgatcgacaa cacctgggca gccggtgtgc tgtttaaggc gctggatttt ggcatcgatg
    13141 tttccattca ggccgctacc aaatatctgg ttgggcattc agatgcgatg attggcactg
    13201 ccgtgtgcaa tgcccgttgc tgggagcagc tgcgggagaa tgcctatctg atgggccaga
    13261 tggtcgatgc cgataccgcc tatataacca gccgtggcct gcgcacatta ggtgtgcgtt
    13321 tgcgtcaaca tcatgaaagc agtctgaaag tggctgaatg gctggcagaa catccgcaag
    13381 ttgcgcgagt taaccaccct gctctgcctg gcagtaaagg ccacgaattc tggaaacgag
    13441 actttacagg cagcagcggg ctattttcct ttgtgcttaa gaaaaaactc agtaatgaag
    13501 agctggcgaa ctatctggat aacttcagtt tattcagcat ggcctactcg tggggcgggt
    13561 atgaatcgtt gatcctggcg aatcaaccag aacatatcgc cgccattcgc ccccaaggcg
    13621 agatcgattt tagcgggacc ttgattcgcc tgcatattgg tctggaagat gtcgacgatc
    13681 tgattgccga tctggacgcc ggttttgcgc gaattgtata acattgccac ttttggacaa
    13741 ttttgcagac atttaattgt gaaaagtctt aaattgttgc gtccgggatc aaggcgtccc
    13801 ggacgaatca ggagtacaat aggcagataa aggcttaaac gctgttccac aggaaagtcc
    13861 atggctgtta ttcaagatat catcgctgcg ctctggcaac acgactttgc cgcgctggcg
    13921 gatcctcata ttgttagcgt tgtttacttt gtcatgtttg ccacgctgtt tttagaaaac
    13981 ggcctgctgc ccgcctcatt tttgccaggc gacagcttgt tgatactggc aggcgcattg
    14041 attgcccaag gggttatgga ttttctgcct acgattgcga ttctgaccgc cgcagcaagt
    14101 ctgggctgct ggctaagtta tattcagggg cgctggttag ggaataccaa aacggtgaaa
    14161 ggctggctgg cacagcttcc tgctaaatat caccagcgcg ccacctgcat gtttgaccgc
    14221 cacggtctgc tggcgctgct ggctggacgt tttcttgcat ttgtccgtac gctgctgcca
    14281 accatggcgg gaatttccgg tctgccaaac cgccgcttcc agtttttcaa ctggttaagt
    14341 ggattgctgt gggtcagcgt ggtaaccagt tttggctatg ccttaagtat gattccgttc
    14401 gttaaacgcc atgaagatca ggtaatgacg ttcctgatga tcctgccaat tgccttgtta
    14461 accgctggct tgttaggcac gctgtttgtg gtgattaaaa aaaaatactg taacgcctga
    14521 cgattttccc cgttcccggc tgctgtaccg ggaacgtatt taattcccct gcatcgcccg
    14581 cattcttgcc gcatcttccc ccggcgtcac accgaagtaa cgtttaaact cacggctaaa
    14641 ttgcgatgcg ctttcatagc cgacgcgcat cgctgctgcg ctggccttca tgccgtcatg
    14701 gatgatcatc atccgcgcct tatgcagacg gtaattcttc aaatactgca acggcgaggt
    14761 gctggtgaca gacttaaaat tatggtggaa cgccgatacg ctcatgttgg cttctgccgc
    14821 cagttgctcg acgctcaggt tttcggtgta tttattctca atccgtttca gcacgcggct
    14881 aatcagactg aagtgagtct ggcgactgac cagcgccagt aacgcgccgc cgcaaggtcc
    14941 ggtcagcacg tagtacagaa tttcgcggat gatctgtttg ccgagaatac gcgcatccag
    15001 tggtcgctcc atcacgtcga gtaaccgctc cgccgcgcat aaaatctctt ctgataacgt
    15061 ggcggagtta atcccgctgg ctgccatcga cggctggaaa tgctcatctt cgccaatgtc
    15121 catcaacagt tcctgtaact gcaaaatatc gacattgaga cgcaaccctg ccagcggcac
    15181 ctctgacgtg gcataggttt cgcactcaaa cggcaacggc accgtcagca gcaggtattc
    15241 attggcatca taacgaaaca cgcgttcatt gatataaccg attttatgcc cggaaaagag
    15301 aattatgatg ccaggctcgt acatcaccgg tgtacgtgcg aaaggcgtct cgccatacaa
    15361 caaacgcaca tcgggcaaca gttctgacaa actattttct ttaattttca gtttattaac
    15421 tttatccgcc agcaagcggc aaatctcttc acgtttcata tcgcgtaatt tcttaggaat
    15481 aatgcggcaa tttgattgtg cgcaattttg tagcatttct ccagcactct ggaggaatag
    15541 gcaagacatt ggcagaaatg agcattgaga gccagggcgc tggcgatcac aatgaaaaac
    15601 atcaggcaga tcgttctctg ccctcatatt ggcccagcaa agggagcaag taatgaacaa
    15661 ctttaatctg cacaccccaa cccgcattct gtttggtaaa ggcgcaatcg ctggtttacg
    15721 cgaacaaatt cctcacgatg ctcgcgtatt gattacctac ggtggcggca gcgtgaaaaa
    15781 aaccggcgtt ctcgatcaag ttctggatgc cctgaaaggc atggacgtgc tggaatttgg
    15841 cggtattgag ccaaacccgg cttatgaaac gctgatgaac gccgtgaaac tggttcgcga
    15901 acagaaagtg actttcctgc tggcggttgg cggcggttct gtactggacg gcaccaaatt
    15961 tatcgccgca gcggctaact atccggaaaa tatcgatccg tggcacattc tgcaaacggg
    16021 cggtaaagag attaaaagcg ccatcccgat gggctgtgtg ctgacgctgc cagcaaccgg
    16081 ttcagaatcc aacgcaggcg cggtgatctc ccgtaaaacc acaggcgaca agcaggcgtt
    16141 ccattctgcc catgttcagc cggtatttgc cgtgctcgat ccggtttata cctacaccct
    16201 gccgccgcgt caggtggcta acggcgtagt ggacgccttt gtacacaccg tggaacagta
    16261 tgttaccaaa ccggttgatg ccaaaattca ggaccgtttc gcagaaggca ttttgctgac
    16321 gctaatcgaa gatggtccga aagccctgaa agagccagaa aactacgatg tgcgcgccaa
    16381 cgtcatgtgg gcggcgactc aggcgctgaa cggtttgatt ggcgctggcg taccgcagga
    16441 ctgggcaacg catatgctgg gccacgaact gactgcgatg cacggtctgg atcacgcgca
    16501 aacactggct atcgtcctgc ctgcactgtg gaatgaaaaa cgcgagacca agcgcgctaa
    16561 gctgctgcaa tatgctgaac gcgtctggaa catcactgaa ggttccgatg atgagcgtat
    16621 tgacgccgcg attgccgcaa cccgcaattt ctttgagcaa ttaggcgtgc cgacccacct
    16681 ctccgactac ggtctggacg gcagctccat cccggctttg ctgaaaaaac tggaagagca
    16741 cggcatgacc caactgggcg aaaatcatga cattacgttg gatgtcagcc gccgtatata
    16801 cgaagccgcc cgctaagctt tttacgcctc aaactttcgt tttcgggcat ttcgtccaga
    16861 cttaagttca caacacctca ccggagcctg ctccggtgag ttcatataaa ggaggaacgt
    16921 atggctaatc caaccgttat taagctacag gatggcaatg tcatgcccca gctgggactg
    16981 ggcgtctggc aagcaagtaa tgaggaagta atcaccgcca ttcaaaaagc gttagaagtg
    17041 ggttatcgct cgattgatac cgccgcggcc tacaagaacg aagaaggtgt cggcaaagcc
    17101 ctgaaaaatg cctcagtcaa cagagaagaa ctgttcatca ccactaagct gtggaacgac
    17161 gaccacaagc gcccccgcga agccctgctc gacagcctga aaaaactcca gcttgattat
    17221 atcgacctct acttaatgca ctggcccgtt cccgctatcg accattatgt cgaagcatgg
    17281 aaaggcatga tcgaattgca aaaagaggga ttaatcaaaa gcatcggcgt gtgcaacttc
    17341 cagatccatc acctgcaacg cctgattgat gaaactggcg tgacgcctgt gataaaccag
    17401 atcgaacttc atccgctgat gcaacaacgc cagctacacg cctggaacgc gacacacaaa
    17461 atccagaccg aatcctggag cccattagcg caaggaggga aaggcgtttt cgatcagaaa
    17521 gtcattcgcg atctggcaga taaatacggc aaaaccccgg cgcagattgt tatccgctgg
    17581 catctggata gcggcctggt ggtgatcccg aaatcggtca caccttcacg tattgccgaa
    17641 aactttgatg tctgggattt ccgtctcgac aaagacgaac tcggcgaaat tgcaaaactc
    17701 gatcagggca agcgtctcgg tcccgatcct gaccagttcg gcggctaaca tgcaaattct
    17761 cccggtggcg gtaatgttcc gctaccggac ttttcagaaa tcatttattc ccctcgcgtc
    17821 ccgcccgttg ttactcttcc ttgttcagga atgccaaata taaggacatc atcatgcaga
    17881 gccggaagct cttaaaagaa caactcatct atatccggga taaacgcaac ggagaggtga
    17941 aaaacagatg aaaataatac ttctgttttt agcagccctg gcaagtttta ccgtacacgc
    18001 acagcccccc tcactgaccg tagaacaaac agtccggcat atttatcaga actataaatc
    18061 agatgccact gccccttatt ttggtgaaac cggagagcgg gcgataactt ctgcgcgtat
    18121 tcaacaggcg cttaccctga acgacaatct tacgctgccg ggcaatattg gctggctgga
    18181 ttatgatccg gtttgtgatt gtcaggattt tggcgatctg gtgctagaaa gcgttgcgat
    18241 aacccaaact gacgccgatc atgccgatgc cgttgtgcgc tttcgtatct ttaaagatga
    18301 taaagaaaag accacgcaga cactgaaaat ggtggcggaa aatggtcgtt gggtcattga
    18361 cgatattgtc agcaatcatg gcagcgtctt acaagcagtt aatagcgaga atgaaaaaac
    18421 gctggccgct ttagcttcgt tgcaaaaaga acagccggaa gcctttgttg ccgaactctt
    18481 tgaacatatt gctgattata gctggccgtg gacgtgggtg gtttccgact cttaccgcca
    18541 ggcggttaat gccttctata aaaccacctt caagacggcc aataatcccg atgaagatat
    18601 gcaaatagaa cggcaattta tttacgacaa tccgatctgt tttggcgaag agtcgctatt
    18661 ttcacgcgtt gatgaaattc gagtcctgga gaaaaccgcc gattccgccc gcattcatgt
    18721 tcgttttacg ctgaccaatg gcaacaacga agagcaagaa ctggttttac agcggcgcga
    18781 aggcaagtgg gaaatcgctg attttatccg cccgaacagc ggcagcctac ttaagcagat
    18841 tgaggcaaaa accgccgcca gattaaagca atgagctgaa ttaaataaca attagccgga
    18901 acaataaata aaagggaaca ctatatgaaa acgattttca ccgtgggagt tgttgttctg
    18961 gcaacctgct tgctcagtgg ctgcgtcaat gagcaaaagg tcaatcagct ggcgagcaat
    19021 gtgcaaacat taaatgccaa aatcgcccgg cttgagcagg atatgaaagc actacgccca
    19081 caaatctatg ctgccaaatc cgaagctaac agagccaata cgcgtcttga tgctcaggac
    19141 tattttgatt gcctgcgctg cttgcgtatg tacgcagaat gataaaaaaa tccccggcag
    19201 catgtcagtt gccggggatt ttttttaacg tccaaccgcc gctttagggc gtttcttcgc
    19261 accagcattc accggacgag attgcgtaga cgacgctttt tttgccgtag caggcgtctg
    19321 acgctgggtc gccatcggcg tatgtttcgt caacgccgga cgggtattgc ggttctggcg
    19381 acgagcttca cgcatctctt caatggttgg cgcaggcact aagcaatcgc gacggctgcc
    19441 aatcagatgc tttttgccca tcgcttccag cgcctggcgg attaacggcc agtttgccgg
    19501 atcgtggtaa cgcaacaacg ctttatgcaa acgacgctgt ttgtcgccct tcggtacgaa
    19561 gacgtcttca ctcttataac caatcttcgc cagcgggttt ttcccggtgt aatacatggt
    19621 ggttgagttc gccagcggcg atgggtagaa gttctgtacc tggtcgagac ggaaacgatg
    19681 ctttttcagc cacagcgcca gattcaccat atcttcatca cgcgtaccgg ggtgcgcgga
    19741 gatgaaatag gggatcagat actgctcttt acctgcctgt tttgagtaag tatcgaacag
    19801 ctctttaaag cggtcatagc tgcccatgcc cggcttcatc atcttcgata acggcccttc
    19861 ttcggtatgt tccggggcaa tcttcagata accgccgacg tgatgggtcg ccaactcttt
    19921 gatatagcgc ggatcttcca cggcgatgtc ataacgtacg cctgaggcga tgaggatttt
    19981 tttaatgcct ttcagatcac gcgcacggcg atagaggttg atcgtcggtt cgtggttagt
    20041 gtccatgtgc ggacaaatat ccggataaac gcacgacaaa cggcgacaag tttgttcagc
    20101 gcgtggcgat ttgcagcgca acatatacat gttggcagtt ggcccaccga gatcggaaat
    20161 cacgcccgta aaacctggaa cggtgtcgcg gatcgcttcg atctcattaa tgatcgaatc
    20221 ttccgaacgg ctctgaataa tgcgcccttc gtgctcggta atagaacaga aagaacagcc
    20281 gccaaagcag ccgcgcataa tgttgaccga aaaacggatc atttcgtaag ccggaatacg
    20341 ggcattgcca taggccggat gtggcacgcg cttgtacggc agcgcaaaaa cgctgtccat
    20401 ctcttcggta gaaagcggga tagcaggcgg gttgatccac acatagcggt caccgtgttt
    20461 ttgcatcaat gcgcgggcgc agcctgggtt ggtttcgtgg tgcagaatgc gcgaagcatg
    20521 ggcgtacagc actttatcgc ccttcacttt ctcgaaagaa ggcagcaaca cgtaggtttt
    20581 ttcccacggt ttcgggcgcg gtggctgcac ggttacggct ttggcttcct gctttttcgg
    20641 tgccaccggt ttgttatccg cgcacggcaa atcttcacca tacggatgcg ggattgggtc
    20701 gatttttcca ggggtatcaa gacgggtgga atccacgccg ctccagccag gcagcgcctc
    20761 tttcacgata atcgcggtat tacgcacatc gcggatttca ctaatcggct cgcccatcgc
    20821 cagacggtgc gccacctcca ccagcggacg ctcaccgtta ccaaacatca gcatgtcggc
    20881 tttcgaatcc accagcacgg aacggcgcac ggtatcggac cagtaatcat aatgtgcggt
    20941 acggcgcaga ctagcctcaa taccgccgag gatcaccggt acatctttcc acgcctcttt
    21001 acaacgctgg gtataaacca gtgtggcgcg atccgggcgc ttacccgcga cgttatccgg
    21061 cgtgtaggca tcgtcatgac gtaaacggcg atcggcggta taacggttga tcatcgaatc
    21121 catgttgcca gcagtaacac cgaaaaacag attcggttta cccagacgca tgaaatcgtc
    21181 tttgctgctc cagtctggct gggcgatgat cccgacgcga aagccctgtg cttccagcat
    21241 acgaccgcaa atcgccatcc cgaagcttgg gtgatcgaca tacgcgtcgc cagtaaccaa
    21301 aatgatgtcg cagctatccc agccaagttg atccatctct tcacgagaca tcggcaaaaa
    21361 cggtgccggt ccaaaacagg cggcccagta ctgcggccag gagaacaggt cgcgatccgg
    21421 ttggatcagg gagatagagc tcattttgct tccagaaatg ataaaaaaat aatcaaaggc
    21481 cggggattat aagccggaac gaaagagaaa tcgaaaagta ttccatactc gccctcctcg
    21541 ggcgagtatg aagattacgg taccggattg actaacagtt gcccaatcga gccacggtcc
    21601 gccatttcca gcgtctgact gttgaagtag aacgggaagt gcgcccagga aggctgaccg
    21661 aaataaacaa gcagctccac ttgtccgtca acccaaacgg tatctttcca gcctctgtct
    21721 tccgggaacg gcatcgcgcc attcacgtta cggatctgga acatcacgcc ttcaatatgg
    21781 aacgcttgcg gctcgtccgc gcgtaccgtc cagcgttccc acgttccttg ctgcgcggtg
    21841 acatcaatac ggttgacgtc ccacagctgt ccattaatac ccgggtcatc acccagacta
    21901 atatcgcgac tgcgaatcgg cgaaccggcc atgatttcag ttggcagcaa gcgcatcgga
    21961 agactgtctg tgaccagcgg cagaaggccg gttgggcgca gcgttagcac cagggtagaa
    22021 accaaaatgc tggatggctc aaagaagcca cgaatacgat caacaatgct cgccgcttcg
    22081 ccacaggtga tcgacacttc atcaccgttg ctcatatcca ccagaatctc gcggcgctcg
    22141 cccggtgcca gcgaaagttg cttcaccgat acaggagcag gcaggaatcc ctgatcgcca
    22201 gaaatcacat gtaacgggcg accatcgctc atctgtagtt gatagcgacg agagttcgac
    22261 gcgttcagca gtcgcaagcg cacccaacca cgcgagactt caacgtacgg gctttgtaca
    22321 ccgttaacca gcagcgtatc accaacaaag ccgccgcttc ccggttcgtt gtattctggc
    22381 gtaccaaagt tatccagccg tttatcctgg ataatgaccg gaaaatcatc cacaccataa
    22441 tggttgggga taggcagcga cttgctgact tcatcttcca ccagccacat tccggcaagg
    22501 ccgttataga cctgctgagc cgtgcggttg ggagtattgg cgtgatacca cagagtagct
    22561 gcgttctggc gaatgggcag tacgggtgcc cagtcagcgt ttggcgacat catccgtgcc
    22621 ggaccgccca tcagcgggcc tggtacctgt agcccggcca ccgtcattga gacattttct
    22681 gtcaggcggt tgctgtaaat aagcttaaca tcgtcgccct tccagacgcg gatagtcggc
    22741 cccaggtaac gaccattgat tccccagacc gacgcgcgtg tccctggcgt aaatgaccag
    22801 tgcgcacgtt gtacagtcat aaacagcggt tgcccacggc gagattcaag tagcggcgga
    22861 acgggtagcg gttgctgttg cccggctgcg ctggccttca ggggaacagc gcctgcacaa
    22921 agtgcaatcc ccgatgcctg aatgaactga cgccgactga gtgacatatt tgctccatgt
    22981 aaaactggct aaagtaatac cgtgcaggaa agtgttcccc gcaaaaatac agattgccga
    23041 cttaaacttt tccggcggct tcgcgttctg cgacttcttt atcgagctcg gcgatttttt
    23101 gttccattat cgaacgacaa tgggcagcca gctcacgaac ctgatctttg ccatactgac
    23161 tgacgtcaat tggcggcagc atttcgacaa tcaccagacc gttgtgcagt cgattaagat
    23221 taatcttatt cgaagttgta gagacgcaca cgggaataat cgggacgccc gccgcaattg
    23281 ccgcgtgaaa tgctccagtc ttgaacggta gcaggccgcg accacggctg cgggttcctt
    23341 ccgggaacat ccagatggaa atacggcgtt ttttgaaatg attcacgact tccgcaatgg
    23401 tgccgtgagc tttagtgcga ttgtttctgt cgatcaataa gttgccggtt aaccagtaca
    23461 actgcccgaa gaaggggatc cacagcaagc tctttttacc taccgtcacc gtcggcggtt
    23521 gcacaatgtt cgatgctgtc accatgtcat agttgttctg gtggttagcg atatagatag
    23581 cattgccgta gctttcagca tctgcaggtt tgcggcactc aactttcagg ccgaacagcg
    23641 gcgcaagacg gccaaacata tgcccaaagg tggccacatg tttcgggtta cgcgggctga
    23701 aaaggcagta aatggagccg aatacacaga ctaagatgct gtaaatcacg gtaataataa
    23761 gacgaaagat atatagcata acaccctctg aaggtctgag agactggcat tgtacgtcac
    23821 ctgaaatcag gttagggcat tgttaaaagc cgctctctgg aaaagcgtat tgttaatcgc
    23881 aacgcatgaa taaacaacgg tttcaaggga atttttatcg tttccggggg ttgaatacgc
    23941 tgccggatga cgacttaacg tttcatccgg cgttccttgc aagcgggagg aaacagcgcc
    24001 ctccccggca tattactctt cgctatcacc gctgctggca cggcgaggag agtcgatctc
    24061 aacacgatcg atacgctgca aaccgcgcat caacgtaccg cggcgtccac gttcgccagt
    24121 gactttctgt agctcttccg gacgcagttt aattttgcgt ttcccaacat gaatggtcag
    24181 cgtgctttgc ggcggcagaa cgtacagttg cgccagacca tcctcgccat gcgcggcttc
    24241 tgccgatgga atgttgataa tcttgttgcc tttgcccttc gacagctgcg gcagatcgct
    24301 taccgggaac atcaacatac ggcctgcctg agtgattgcc agcagcatgt cggaagcatc
    24361 ttcaatcacc accggcggca taacatgggc attttccggt aaggttatca aagctttacc
    24421 tgcacggtta cgcgccacca gatcgttaaa ggtgcagacg aaaccgtaac ccgcatcgga
    24481 agccatcagc agtttctgat cgtcgctttc catcagcata tggtcaacgg tcgccccagg
    24541 cggcaacgtt aatttgccgg tgagcggctc gccctgacca cgcgccgacg gcagcgtaat
    24601 cgggtcgatg gcatagctac gaccggtgga atcaacaaac actaccggtt ggttgctctt
    24661 acctttcacc gcagctttga agctatcacc cgctttataa ttcaggcccg gcgcgtcgat
    24721 atcatggcct ttagcgctgc gtacccaacc catctgcgac agcacaatgg tgacaggttc
    24781 agacggcagc atgtcgtgct cgctcatcgc tttcgcttct tcgcgttcct gcaacggcga
    24841 acgacgatcg tcaccgtagg cttgcgcgtc tgcctgcagt tctttcttca gcaggttatt
    24901 cattttacgc tcggaagcca aaatgccctg caactggtcg cgctcttttt ccagctcact
    24961 ctgctcaccg cgaatcttca tctcttccag tttggcaaga tgacgcagtt tcagttcgag
    25021 gatcgcttcc gcctgggttt ccgtaaggcc aaaccgcgac atcagcgccg gtttcggttc
    25081 atcttcgtta cgaatgatct caatcacttc gtcgatgttg agaaacgcca ccagcaaacc
    25141 ttccaggata tgcaggcgct tgaggacttt ctccagacga tagttcagtc ggcggcgcac
    25201 ggtatcgcga cggaacacca gccattcgga gaggatttcc agcaggtttt tcaccgccgg
    25261 acgaccatcc agaccgatca tattgaggtt aatgcgatag ctcttttcca gatcggtggt
    25321 agcgaagagg tggttcatca cctgatccat atccacgcgg ttggaacgcg gcacaataac
    25381 cagacgggtc gggttctcgt ggtcagattc atcgcgcaga tcgtcaacca tcggcagctt
    25441 tttgttgcgc atttgcgcag caatttgctc cagtacgcgc gcacctgaaa cctgatgcgg
    25501 taatgcgctg ataaccaccg cgccatcttc tttcttccac accgcgcgca tacgcactga
    25561 accacgtccg ttctcgtaga ttttacggat ctcggcgcgc gaagtgataa tttccgcttc
    25621 agtcggataa tccggcccct gcacgatatc cagcagctga tcgagcgtgg ttttcggctg
    25681 gtcgattaat gcgattgccg cctgagctac ttcacgcagg ttatgcggtg gaatatcggt
    25741 cgccatgccg acggcaatac cggtggtgcc gttaagcaaa atgtttggca gacgagcagg
    25801 cagcattttc ggctcctgca aagtgccgtc gaagtttggc acccagtcag ccgtcccctg
    25861 ccccagctcg ctcaatagca gctcggaata tttcgacaac cgggattcgg tgtaacgcat
    25921 tgccgcgaac gatttcggat cgtccggcgc gccccagttc ccctgaccat caaccagcgg
    25981 ataacggtaa gagaacggct gcgccatcag gaccatcgct tcataacagg cgctatcgcc
    26041 gtgcggatgg tatttaccca gtacgtcacc gacggtacgg gccgattttt taaatttggc
    26101 gctggcattc aggcccagtt cagacatcgc atacacaatg cggcgctgaa caggtttaag
    26161 accatcgcca ataaacggca acgcacggtc catgatcacg tacatggagt agtttaagta
    26221 ggcgttttcc gtaaattcat gtagcgcaag gcgctctgcc atatcgctca ttaattctga
    26281 ttcctcaact tattcgccag ccttcaaagg ggcaatattg ccggagatac tacattatct
    26341 gccgcgtcga gtcacaggag atcagcgtga atagcgccgc cggacgtgct ccgacggcga
    26401 taaaggcatc aatgtgcctt gatatacaac tctttgctgt agacttgatc ggcatagagg
    26461 gcagcacaag gttgcgccca tgccacacca ctcggcatgg gggtccgctc cgggcgattc
    26521 gagaagttga ggttatgcga gtccagggaa gcctaaagca tcaaagtagt cgactgtaag
    26581 tatacggttc agcccagttt agctgtgtct ccaccagtgc cccgcgcctc ctgccataag
    26641 tgcggcttgc tcatggatac ccccgagacg gcttacggcg caccggataa taaatttcgc
    26701 gtatacatgg tattccttac cggagaaatt ataagcccaa caacaatacg cctgtggcat
    26761 tgttcgctca aacttatcgc gagtgatttg gctcacactc cggtaaagat tccccatcac
    26821 gccaacggca cataaacatc cgtttccagt cgctgctctg tcaccccttc ggcaagattg
    26881 gtgtagtgaa acagaatcgg tgctttacgc attttctcgc cgcttgcagg cagccagtgg
    26941 cgaataatgc cccatatcgt gtgtgaaata tcgtccagct cgccaacgtg gcgggccacg
    27001 gcataacgtc caccggtaag ttcaccattg ctcacaccat aacgattatc gggaatcggt
    27061 tcgctaacgc tgccgcagat atcaaagcga aacgcttccg gtgcggtggt ggcagggtcg
    27121 tcccaggcga cgccaaaagt ctggctttgg ttaacaggag aaagccccgt ctctttacgc
    27181 cacatgataa atttcgccac actgtagttg agcaactcag ggctacagcg gtgcggcaac
    27241 atcgccacag ggattgatgg gaaatcgata atgtttacat ccagtgtcag gtttgtcatt
    27301 ttgcctccct gcgaaattat tcccgggaac gcgtcccggg agcggtaaca attacggatt
    27361 tactttgcgg atctgtttga cgtcaatttc aacagaattc cagtctttat cgacttcacc
    27421 ctgaatctca accgtatctt tcggcgtcac cgtcacaccg ttccagcgtt tgtggtcgat
    27481 atcaacattg atagtaccgc tggcatcttt aaacacgtag agatcgtcag agatgcgttc
    27541 aacgatattg ccgcgcaggg ttacccaggt gtcgtcacgc agggattttg cgctttctac
    27601 ggtcgttacg ctgccgttcg gcccctggaa tcctccggcc tgactttgcg ttgccgatgg
    27661 gccagaaaaa ccgccctgct ctgctgccat caccggtgcg ctgcacaggg ccattactgc
    27721 gattactgct gcgaattttt tcatgtttat tactcccttt aatgtctgtt tccgagcatt
    27781 taacaagata gtccttaaca acttcttaag ggaaaaaaat aaaatttagt gctgtacaga
    27841 gcgcgttaca acacggttta ctggcagcaa atacggttat cgcagggatg aaaaaatgcg
    27901 aattttactg atagaagatg acatgctgat tggcgacggc atcaaaacgg gccttagtaa
    27961 aatgggtttt agcgtcgact ggtttacaca aggtcgtcag ggaaaagagg cgctttatag
    28021 cgcgccttat gatgcggtga tcctggattt aaccttacca ggcatggatg gtcgcgatat
    28081 tttgcgcgaa tggcgagaaa aaggtcagcg tgagccggta ctgatcctga ccgcgcgcga
    28141 tgcgctggag gaacgtgtag aagggctgcg tctgggagct gacgattatc tgtgtaaacc
    28201 ttttgcgttg atagaagtcg ccgccaggct ggaagctctg atgcgccgaa ccaacggcca
    28261 ggccagcaac gagctgcgcc acggtaacgt catgctcgac cccggcaaac gtatcgccac
    28321 gctggctggc gaacccttaa cactgaaacc aaaagaattt gccctgctgg aattactgat
    28381 gcgtaacgct ggtcgggtac tgccgcgcaa actgattgaa gagaaactgt atacctggga
    28441 cgaagaggtc accagtaatg ccgttgaagt gcatgtgcat catctgcgac gcaaactcgg
    28501 tagtgatttt attcgtaccg tgcatggtat tggctacaca ttaggtgaga aatgaaattt
    28561 acccaacgtc ttagtctgcg cgtcaggctg acgctaatct ttttaattct ggcctcggtg
    28621 acctggctgc tttccagctt tgtcgcctgg aaacaaacaa cggataacgt cgatgaattg
    28681 ttcgacaccc aactgatgct gtttgccaag cggttaagta cgctcgatct caacgaaatc
    28741 aacgcggcgg atcgcatggc acagacgcca aataaattaa aacacggtca tgttgatgac
    28801 gatgcgctga cctttgccat ctttacccac gacggcagaa tggtccttaa cgatggcgat
    28861 aacggagaag atattcctta tagctatcaa cgggaaggtt ttgctgacgg gcaactggtg
    28921 ggcgataaag atcaatggcg ttttgtctgg atgacctcac ctgatggcaa atatcgcatc
    28981 gttgttggtc aggaatggga ataccgtgaa gacatggcgc tggcgattgt tgccgggcaa
    29041 ttgatcccgt ggctggtcgc actgccgatt atgttaatca tcatgatggt actattgggt
    29101 cgtgaactcg cgccgctgaa caaactggcg caggcgctgc gtatgcgtga ccctgactcg
    29161 gaaaaaccac taaacgcgac tggcgtaccc agcgaagtgc gtccgttggt tgagtcgcta
    29221 aatcaactgt tcgcccgcac acatgcgatg atggttcgtg aacgacgctt tacctccgac
    29281 gcagctcacg aactacgtag cccgttaacg gcgctgaaag tgcaaaccga agttgcgcag
    29341 ctttctgacg atgatccgca agcgcggaaa aaagcgctgc ttcaattaca ttacgggatc
    29401 gatcgcgcta ctcgtctggt tgatcaactg ctcactctat cgcggctgga ctcactggat
    29461 aaccttcagg acgtcgcgga gatcccgctt gaagatctcc tccaatcgtc ggtgatggat
    29521 atttaccaca cggcgcagca ggcgaaaatt gacgtgcgac tgacactcaa tgcccacggc
    29581 atcaaacgca ccggacaacc gctattgcta agtttgttgg tgcgaaattt gctggataac
    29641 gccgtgcgct acagtccaca gggcagcgtg atagacgtca cgctgaatgc tgataatttc
    29701 atcgtgaggg ataacggccc cggtgtgacg ccagaggctc tggcgcgaat tggcgaacgc
    29761 ttctatcgcc cccccggaca aaccgctacc ggcagtggac ttgggctatc gattgtccag
    29821 cgaatcgcca aattgcatgg catgaatgtt gagtttggga atgcggaaca aggtggattt
    29881 gaggcgaagg taagctggta acttctctgt ctatgagagc cgttaaaacg actctcatag
    29941 attttactaa tagcaaaata taaaccgtcc ccaaaaaagc caccaaccac aaaccagaca
    30001 aataccgagc gaaaatacat atacccaaaa ctcgaacatt tcccgcataa agagttttct
    30061 taagataaga ataataagtg gcgtaagaag aaaaaatgct gcaatcattg cttgcaatat
    30121 acgatcttcg cctgaaacgg aaggtatact gcaaatattg tctcccgact caagcatcca
    30181 gtcatactta ttgaaagcaa aaaaagcatc tattaaccaa taagtaagca ttatgtataa
    30241 cagagcttca aatattgttt gaattttatg ctttaacata tatcagtacg ctcataaaaa
    30301 tccatttata attatcaaca tgacacgttg atattttcat cttttactta ttcaaagcca
    30361 tattttcaat cccaaaaaaa accgaaccaa acgtgtaaat tattccggtg cgagtaagaa
    30421 ttatgaggaa tggctatcag tattgtcatt ttcagaaaat atttatcctg catcggtgag
    30481 tcagagcaag atcagacttt tgctaaattt gcaaaagact ttgcacattt tgctaatttc
    30541 accgtaccgc tctgtgacgt actatagtcg gcaaacgtct caccttgagg ttaaaaaatg
    30601 agcaacatcc tgattatcaa cggcgcgaaa aaattcgccc actccaatgg tcaactgaac
    30661 gacaccctga ccgaagtcgc ggatggcaca ctgcgcgacc tcgggcatga tgtccgcatc
    30721 gttcgcgccg acagcgacta cgatgtcaaa gcggaagtac aaaactttct ctgggctgat
    30781 gtggtgatct ggcagatgcc aggctggtgg atgggcgcgc cgtggacagt gaaaaaatat
    30841 attgatgatg tattcaccga aggtcatgga acgctgtatg ccagcgatgg ccgtacccgc
    30901 aaagatccgt caaaaaaata cggttccggc ggcctggtac agggcaaaaa atatatgctt
    30961 tctctgacct ggaacgcacc aatggaagcc ttcaccgaaa aagatcaatt cttccacggc
    31021 gttggcgtcg acggtgtgta tctgccgttc cataaagcaa accaattcct tggcatggaa
    31081 ccgctgccga catttatcgc taatgacgtg ataaaaatgc ctgatgttcc ccgctatact
    31141 gaagaatatc gcaagcatct tgtggaaatt tttggttaac tagagctcag gctttagaag
    31201 gagttaacca tgcttaccgt aatcgcagaa atccgtactc gtcctggtca acatcaccgt
    31261 caggcggtat tggatcagtt tgctaaaatc gttccaaccg tactgaaaga agaaggttgc
    31321 cacggctatg cgccaatggt ggattgcgct gctggcgtga gtttccagtc tatggcaccg
    31381 gattctatcg tgatgattga gcagtgggaa agcatcgcgc atcttgaagc gcatctgcaa
    31441 accccgcaca tgaaggcgta cagcgaagcc gtaaaaggcg acgtgctgga gatgaatatc
    31501 cgcatcctgc aacctgggat ttaaacctgc cttgtttgcc cggccatcct gaccgggcaa
    31561 tgttctttcc tttaaacctc aatctccgcc atgtcgcctt tctcttgcaa ccagttgcgg
    31621 cgatcttccg agcgtttctt cgccagcagc atatccatca tcgcgtcagt acgctgatcg
    31681 tcttcatcat cgatagtcaa ctgcaccaga cggcgagtgt tcggatcaag cgtggtttca
    31741 cgcaattgca tcgggttcat ttcccccaga cctttaaaac gctggacgtt cggcttgcct
    31801 ttcttgcgtt ttaattgctc aagtacgccc tctttctctt cttccgtcag cgcgtaataa
    31861 acctctttcc cgagatcaat acggtagagc ggtggcagtg cgacgtaaac gtgaccgtgt
    31921 ttcaccaacg cgcggaagtg ttttacgaac aaagcgcaga gcagcgtggc aatgtgcaga
    31981 ccatcagagt ccgcatccgc gaggatacag attttgccat aacgaagctg gctcagatcg
    32041 tcgctgtcag gatcgatacc gatcgctacc gaaatatcat gcacttcctg cgaggccagc
    32101 acttcgtcgg aagaaacttc ccaggtgtta aggatcttac ctttcagtgg catgatcgcc
    32161 tgatattcgc gatcgcgcgc ctgcttggca gatccgcctg cggagtcacc ttccacaagg
    32221 aacagttcgg tacggttaag atcctgcgcg gtacagtcag ccagtttgcc aggcagtgct
    32281 gggccgctgg tcagcttttt gcgcaccact tttttagccg cacgcatacg gcgctgggcg
    32341 ctggaaatcg ccatctccgc cagcagctcc gccgcctgaa cgttctggtt cagccacagg
    32401 ataaaggcat ctttcaccac gcctgaaacg aatgccgcgc attgacgcga agagagacgc
    32461 tctttggtct gcccggcaaa ctgcggatcc tgcattttca ccgacagaac ataggcgcag
    32521 cgatcccaga tatcttccgc cgacagcttc acgccgcgcg gcagaatgtt gcggtattca
    32581 cagaactcac gcatcgcgtc caacaggccc tgacgcagac cattaacatg ggtaccgccc
    32641 tgcatcgttg ggataaggtt gacgtagctt tcggtcagca gttcaccgcc ttccggcagc
    32701 cacagtagcg cccagtccac agcttcagta tcgccagcga aattaccgat aaacggtttt
    32761 tctggcagcg tcggtaaacc gtttaccgct tccgccaggt aatcattcag accgtcctga
    32821 tagcaccagc gctgttcggt gttgttgatc tcatctttaa aggtaatctc aacgccgggg
    32881 cacagtactg ctttggcctt cagcacatgc gtcaggcgtg aaacagaaaa acgcgggctg
    32941 tcaaagaagg tttcatccgg ccagaagtgc acgctggtac cggtattgcg tttaccgcaa
    33001 gtgccgacaa cctgtaaatc ctgcaccttt tcgccatttt caaaggcgat gttataaacc
    33061 tgaccatcgc ggcgcacgtt aacttctacg cgcttcgaca gggcgttaac caccgaaatc
    33121 cccacgccat gcaggccgcc agagaactgg taatttttgt tagagaattt accgcctgca
    33181 tgcagacggc aaagaatcag ttcaaccgcc ggtacaccct cttccgggtg aatatccacc
    33241 ggcatcccgc gcccatcgtc aataacttct aacgactggt cagcatgtaa gattacatcc
    33301 acgcgttttg cgtgacccgc cagtgcttca tcgacactgt tatcaataac ttcttgcccc
    33361 aaatggttag ggcgagtggt atcggtatac atccccggac ggcggcgaac cggctcaagc
    33421 ccggtgagta cctcaatggc atcagcgtta taagtttgcg tcatggttta agttagcaat
    33481 tcgagttgat cgtcagagat ggtgcagacc aagaaaatcg acgatcgggt tgaaataatc
    33541 ttcgaagccc gtgaatgcgt ggttgccgcc ttctatgaca gtctggcggc aggaagcgta
    33601 gtacgccacc gcctggcggt aatccagcac ttcatctccc gtctgttgca gcagccagat
    33661 caaatccggc gcttccagcg ggtcaatctg catgactttg agatcgtaaa tatggcgtga
    33721 ctctagcaca tattgctgcc cggtgtaggg gttctcgttc tgaccgagat agtccgtcag
    33781 cagttcaaac gggcgcaccg ccgggtttac caccactgcg ggcagcataa aacattgtga
    33841 caaccaggtg gcgtaatatc cccccagtga cgaaccgaca atacccagcg aatcgccgcc
    33901 atgttccagg acaatggatt ccagcagctc tgccgcgtcg gaaggatacg gcggcaactg
    33961 cggaatgatc atctcaacgt cagggtgatg ttccgccagc cagtttttta acaagctcgc
    34021 ttttgcagag cgcggcgagc tgttgaaacc gtgtaaataa agaagcgtag acatcagtag
    34081 ccttctgaag cggtatcagg ttggaaacgt gtgtccgcca ggcgatgcac ctcggtggtc
    34141 agcgtgccat cagcatgtaa ctcgagagta cgccagccgg gcgcgatggt gtccagcgta
    34201 aagttggaac agtgcggctt aaactgcaca caggtcgacg gcgttgccag caggcggcga
    34261 ccgttccagt cgagatccag ctcctgatga atatgaccgc acagcaagta tttgacgtgc
    34321 ggaaacttcg ccagcacggt atccagttcg cccgcgttac gcaggctgtg ttgatcaagc
    34381 caactacaac ccgcaggtag cggatgatga tgcagcagca gcaacgtatg gcgttctggc
    34441 gcatcggcca gtttacgttc cagccactca agctgaaact cgctcagctc accgtgcggc
    34501 acgccaaaca cctggctatc cagcaacagg atttgccatt gctcaccaat aaacacgcgc
    34561 ttcgccgggg agatacccgc atcctgtaac gcgctgtaca tcgcgggctg gaaatcgtgg
    34621 ttgcccggca gccagacgca gggcgcacga aaacttgcga tgccttcagc gaaatgctga
    34681 taggccgcag aggattgatc ctgcgctaaa tcacctgtcg cgacaatcag gtcgaattcg
    34741 tgctgatgtg gacgaatcgc ctccagcacc gcctggtagc tttcccaggt gtttacccct
    34801 aacagggctt cgtgcttttg tgcaaacagg tgagtatcgg taatttgtaa aatcctgact
    34861 ctggcctcac cagccagagg aagggttaac aggctttcca aatggtgtcc ttaggtttca
    34921 cgacgctagt aaaccggaat cgccatcgct ccatgtgcta aacagtatcg caaccagtcc
    34981 gctaaaaact ggttaatttg atgcttttcg tcgcgttgat gcaacttttt attaggataa
    35041 tcataccgcg ctttgaagcg aaaaatctgc tggcttgaac acacttcagc caccatcgcg
    35101 tcatgataca gacgcaccgt cattgacgga aggctccagt aactgatcgc gggcgcagtc
    35161 tgttctattg tcaccagggt agtgtatcgg gtcgattcca caatcgtcag ccgatattgt
    35221 gcgtttgcca cctgatagct tacagtttcg ccgggtgcgt cattgcgcgg taacaaacgg
    35281 cgcaattgtg aaaagttcat ctcgcacagg cgcatcattt caggaaagtc aggtgtgtaa
    35341 cgcttcattt atgcccactc attttttaac gcttgatgat gcagctgcag ccattgcaaa
    35401 gcgatgaccg acgctgcgtt gtcgattttc ccctcttcta cccactggta tgcctgttcc
    35461 cggcttacca catgaacgcg aatatcttcg ttttcatcag ccagaccatg aataccgctt
    35521 gcggtcgtgg cgtccacttc gcccaccata attgacgaac gctcactggt gccccccggg
    35581 cttgccagga aacttaacac cggtttggtc cgtttgacta tcagtcccgc ctcttcaatc
    35641 gcttcgcgac gggcaacatc ttccacactt tcaccctctt ctatcatccc ggcaaccatc
    35701 tccagtagcc agggggtttc actggtgtcg tatgcggcaa tccgaatctg ctcaatcagc
    35761 acaacttcat cacgcactgg gtcaaagggt agcaagactg cggcgtgacc gcgctcaaaa
    35821 atttccctcc gtacctcatg actcatttgc ccgttgaata aacgatgacg aaatctataa
    35881 agatctaatg aaaaaaagcc gcgataaagt gtttctcgtg caataatttc tacatcgttt
    35941 ttgccaaatg taacgggcag gttgtctggc ttaagcattg ttaatgtcct ggcactaata
    36001 gtgaattaaa tgtgaatttc agcgacgttt gactgccgtt tgagcagtca tgtgttaaat
    36061 tgaggcacat taacgcccta tggcacgtaa cgccaacctt ttgcggtagc ggcttctgct
    36121 agaatccgca ataattttac agtttgatcg cgctaaatac tgcttcacca caaggaatgc
    36181 aaatgaagaa attgctcccc attcttatcg gcctgagcct ttctgggttc agttcgttga
    36241 gccaggccga gaacctgatg caagtttatc agcaagcacg ccttagtaac ccggaattgc
    36301 gtaagtctgc cgccgatcgt gatgctgcct ttgaaaaaat taatgaagcg cgcagtccat
    36361 tactgccaca gctaggttta ggtgcagatt acacctatag caacggctac cgcgacgcga
    36421 acggcatcaa ctctaacgcg accagtgcgt ccctgcagtt aactcaatcc atttttgata
    36481 tgtcgaaatg gcgtgcgtta acgctgcagg aaaaagcagc agggattcag gacgtcacat
    36541 atcagaccga tcagcaaacc ttgatcctca acaccgcgac cgcttatttc aacgtgttga
    36601 atgctattga cgttctttcc tatacacagg cacaaaaaga agcgatctac cgtcaattag
    36661 atcaaaccac ccaacgtttt aacgtgggcc tggtagcgat aaccgacgtg cagaacgccc
    36721 gcgcgcagta cgataccgtg ctggcgaacg aagtgaccgc acgtaataac cttgataacg
    36781 cggtagagca gctgcgccag atcaccggta actactatcc agaactggca gcgctgaatg
    36841 tcgaaaactt taaaaccgac aaaccacagc cggttaacgc gctgctgaaa gaagccgaaa
    36901 aacgcaacct gtcgctgtta caggcacgct tgagccagga cctggcgcgc gagcaaattc
    36961 gccaggcgca ggatggtcac ttaccgacgc tggatttaac ggcttctacc gggatttctg
    37021 acacctctta tagcggttcg aaaactcgtg gtgccgctgg tacccagtat gacgacagca
    37081 atatgggcca gaacaaagtg ggcctgagct tctcgctgcc gatttatcag ggcggaatgg
    37141 ttaactcgca ggtgaaacag gcccagtaca actttgttgg tgccagcgag caactggaaa
    37201 gcgcgcatcg tagcgtcgtg caaaccgtac gttcctcctt caacaacatt aatgcatcta
    37261 tcagtagcat taacgcctac aaacaagccg tagtttccgc tcaaagctca ttagacgcga
    37321 tggaagcggg ctactcggtc ggtacgcgta ccattgttga tgtgttggat gcaaccacca
    37381 cgctgtacaa cgctaagcaa gagctggcaa atgcgcgtta taactacctg attaatcagc
    37441 tgaatattaa gtcagccctg ggtacgttga acgagcagga tctgctggca ctgaacaatg
    37501 cgctgagcaa accggtttcc actaatccgg aaaacgttgc cccgcaaacg ccggaacaga
    37561 atgctattgc tgatggttat gcgcctgata gcccggcacc cgtcgttcag caaacatccg
    37621 cacgcactac caccagtaac ggtcataacc ctttccgtaa ctgatgacga cgacggggct
    37681 tcggccccgt ctgaacgtaa ggcaacgtaa agatacgggt tatctgccgc attcttcccc
    37741 cttctcgctt caatttcgac cagccatcct ctattctgat gggtatttac cactggtccc
    37801 ggaagacaaa aatgaaacgg acaaaatcca tacgccacgc atcgttccgc aaaaactgga
    37861 gcgcgcgcca tctgacacca gtcgctctcg cggttgccac tgtttttatg ctggctggct
    37921 gtgaaaagag tgatgaaaca gtgtctctct atcaaaatgc tgacgactgt tcagctgcaa
    37981 acccaggcaa aagcgccgaa tgtaccaccg cgtacaacaa tgcgctgaaa gaagccgaac
    38041 gtactgcgcc gaaatacgcc acccgtgaag actgtgttgc tgaatttggt gaaggtcagt
    38101 gccagcaggc accagcccag gctggcatgg caccagaaaa ccaggcgcag gcccagcaat
    38161 ccagcgggag tttctggatg ccgctgatgg ccggttacat gatggggcgt ctgatgggcg
    38221 gcggcgcggg atttgcacag cagccgctgt tctcctcgaa aaacccagcc agcccggctt
    38281 acggtaaata taccgacgcg acgggtaaaa actatggcgc agcccagcca ggccgcacca
    38341 tgaccgtacc gaagacagcc atggcaccaa aaccggcgac caccactacc gttacccgtg
    38401 gcggttttgg tgaatctgtt gccaaacaaa gcactatgca gcgtagcgca actggcacct
    38461 cttctcgttc aatgggtggc tgataccgat ggaaagagtc agtattaccg agcgcccgga
    38521 ctggcgtgag aaagcccacg aatacggttt caattttcat accatgtacg gcgagccgta
    38581 ctggtgtgaa gatgcttact acaagttgac cctcgcccag gttgaaaagc tggaagaagt
    38641 caccgccgaa ctgcaccaga tgtgcctgaa agtggtggaa aaagtgatcg ccagcgatga
    38701 gctgatgacc aaattccgca ttccaaaaca cacctggagt tttgtgcgtc agtcatggct
    38761 gactcaccag ccatcgcttt attcgcgtct tgatctggca tgggatggca ctggcgaacc
    38821 taaactgctg gaaaataacg ccgatacacc aacgtcacta tacgaggcgg cgttctttca
    38881 gtggatctgg ctggaagatc agcttaacgc cggtaacttg ccggagggca gcgaccagtt
    38941 taacagtctg caagaaaagc taatcgatcg ctttgtcgag ttgcgtgaac agtatggctt
    39001 ccagttgctg catctcacct gctgtcgcga cacggtggaa gatcgcggaa ccattcagta
    39061 tttgcaggac tgcgcgacgg aagctgaaat cgctaccgag ttcctctaca ttgacgatat
    39121 cgggttaggt gaaaaaggtc agttcacgga tttacaggat caggtaattt ccaacctgtt
    39181 caagctgtat ccatgggaat ttatgttgcg tgagatgttc tccaccaagc tggaggatgc
    39241 aggcgtacgc tggctggaac cggcgtggaa gagcattatc tccaacaaag cgcttctacc
    39301 gctactgtgg gagatgttcc cgaatcaccc gaacctgctg cccgcttatt ttgcggaaga
    39361 tgatcatccg caaatggaaa aatatgtggt taaaccgatc ttctcccgtg aaggcgcaaa
    39421 cgtgtcgatc attgagaacg gcaaaaccat tgaagcagcg gaaggtccgt atggcgaaga
    39481 agggatgatt gttcagcaat tccacccgtt accgaaattc ggcgacagct atatgctgat
    39541 tggtagctgg ctggtgaacg atcaacctgc cggaattggc attcgtgaag accgtgcgtt
    39601 gatcacccag gatatgtctc ggttttatcc acatattttt attgagtaat caatgatgcc
    39661 ggatggcatt cgccatccgg taattgttaa cctatctgca ccgacagcat actcaggctg
    39721 cccatttcta taccatcgac cggaatggta attggctcct gcccatccca cgcacctaag
    39781 acatacaaca acggcagata gtgctccggc gttgggttcg ataacgcgcc accttcatgg
    39841 tcgaggtaat tcaccagagg atgctgctct accgcccctt gccacgtcag attcgctttc
    39901 acatactcat taaacgacat cgcccaagga tatggtgaac tatcaccgtg ccacttcact
    39961 gtacgcaggt tatgcaccac gttgccactg gcgaccaaca ttattccttc atctcgcagc
    40021 gctgccagtt tgcgccccat ttcgaaatgc caggcggcag gtttgctact gtcgatactc
    40081 aactgcacca tcgggatatc ggcgtcagga tacatcttaa tcagcacgcc ccaggaaccg
    40141 tggtcaaagc cccaggcttc tttatccagc gtcaccgaga ccggcgctaa cagctcaacc
    40201 agatgctgtg ccagcacagg cgaacccgga gcaggataat gcgtatcgta cagcgcctgc
    40261 gggaagccac caaagtcatg aatcgtgggc ggcgtctcca tcgcggtcac tcctgttcca
    40321 cgggtaaacc agtgagccga aaccaccaca atcgcttgcg ggcgtggcaa tgtcatcccc
    40381 aacttctgcc agctgcgggt atacaaatta tcttccagca cgttcatcgg actaccgtga
    40441 cctaaaaaca atgctggcat acgtgttgaa gacatgatga tatccttaac taaaggtgtc
    40501 attttgatat cctcacaata cgcttgttcg gcggagtaag aacccggata acaatgatga
    40561 tgatcatcag ttattttgac gatctgcctg aaggtgaaga tttataagga gttgtcgatg
    40621 tcagtacctc tcattctgac catactggcg ggggcagcca cgtttattgg cgcgtttctc
    40681 ggcgttctcg ggcaaaaacc ctcgaaccgc ttactggcgt tttcgctagg atttgcggcg
    40741 gggatcatgt tgctcatctc attaatggaa atgcttcctg ccgcactagc agctgaagga
    40801 atgtcgcctg tgttgggtta tggaatgttt atcttcggtc tgcttggcta ttttggcctg
    40861 gaccgcatgt tgccacatgc gcatccgcag gatttaatgc aaaaatcggt gcagccgttg
    40921 ccaaaatcga tcaagcgcac agccattctg ctcactctcg gcatcagtct gcataacttc
    40981 ccggaaggga ttgccacctt tgtcacggcg agcagcaacc tggagctggg atttggcatc
    41041 gcactggccg tcgctttgca caatatccct gaaggtctgg cagtggcagg cccggtttat
    41101 gcggcaacgg ggtctaaacg caccgcgatt ctgtgggcgg ggatttctgg actagcagaa
    41161 attcttggtg gtgtgctggc gtggttaatc ctcggtagca tgatttcccc ggtggtcatg
    41221 gcggcaatca tggcggcggt tgcaggaatt atggtggcgc tctcggttga tgaattaatg
    41281 ccgctcgcca aagagattga ccctaataat aaccccagct atggcgtact atgtggaatg
    41341 tcagtgatgg gattcagttt agtgctgcta caaacggcgg gaattggtta aaaacaacat
    41401 cagaagttgt ccagcacatg gacaacttct gccagcttca cgaaagcctt attctacctt
    41461 ttcggctgtc tcttctctcg tactgtttaa gtatttgttc cgcgcttcaa gcagtgcgtc
    41521 tctgtcctgg cgaaacgccc gacaataacg tttcaaatgc aggaaataac ccaccacaac
    41581 cagagcaatc aatacaatcc agtaccaggc gataaacatc cttttaccct taatatttaa
    41641 caatactaaa catttagcgc ataaattt
//
LOCUS       DAPGWB010000020        41465 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.020, whole genome shotgun sequence.
ACCESSION   DAPGWB010000020 DAPGWB010000000
VERSION     DAPGWB010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 41465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41465
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.020"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(118..3267)
                     /locus_tag="RHX79_001109"
     CDS             complement(118..3267)
                     /locus_tag="RHX79_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HDV2196305.1"
                     /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT
                     ISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI
                     AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA
                     NMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQ
                     LGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYD
                     IIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVK
                     ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLS
                     AVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEG
                     KKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPD
                     EDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNT
                     GIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDF
                     ELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALG
                     VSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM
                     VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVG
                     YDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL
                     AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL
                     RPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVR
                     RRFSRKNEDIEHSHTVDHH"
     gene            complement(3290..4483)
                     /gene="acrA"
                     /locus_tag="RHX79_001110"
     CDS             complement(3290..4483)
                     /gene="acrA"
                     /locus_tag="RHX79_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrA"
                     /protein_id="HDV2196306.1"
                     /translation="MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVT
                     VKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQ
                     ATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAA
                     KAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQ
                     SSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITL
                     RAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVET
                     RPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQP
                     EQSKS"
     gene            4625..5272
                     /gene="acrR"
                     /locus_tag="RHX79_001111"
     CDS             4625..5272
                     /gene="acrR"
                     /locus_tag="RHX79_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrR"
                     /protein_id="HDV2196307.1"
                     /translation="MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVT
                     RGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVT
                     EERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMT
                     RRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE"
     gene            5400..8762
                     /gene="mscK"
                     /locus_tag="RHX79_001112"
     CDS             5400..8762
                     /gene="mscK"
                     /locus_tag="RHX79_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HDV2196308.1"
                     /translation="MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTK
                     ADLQAQLDSLNKQKDLSAQDKLVQQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKM
                     RQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVS
                     LQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQ
                     RKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPD
                     EAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKE
                     QIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAF
                     VNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSV
                     SKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWEKAWPAVFIAFL
                     AGLPLLLIAGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLI
                     ILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTS
                     HWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRES
                     WRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLSGRWIETVYLVIIWNLLYQ
                     TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLM
                     FALFGVMFWAIWSDLITVFSYLDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVA
                     WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQW
                     LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTIT
                     DFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHP
                     RVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAF
                     NQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG"
     gene            complement(8974..9135)
                     /gene="rsmS"
                     /locus_tag="RHX79_001113"
     CDS             complement(8974..9135)
                     /gene="rsmS"
                     /locus_tag="RHX79_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pleiotropic regulatory protein RsmS"
                     /protein_id="HDV2196309.1"
                     /translation="MSLENAPDDVKLAVDLIVLLEENQIPARTVLRALDIVKRDYEKK
                     LTRDDEAEK"
     gene            complement(9149..9676)
                     /gene="priC"
                     /locus_tag="RHX79_001114"
     CDS             complement(9149..9676)
                     /gene="priC"
                     /locus_tag="RHX79_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N''"
                     /protein_id="HDV2196310.1"
                     /translation="MKTALLLEKLEGQLATLRQRCAPVAQFATLSARFDRHLFQTRAT
                     TLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAP
                     PKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCR
                     HALEKIENRLARLTR"
     gene            9746..10123
                     /locus_tag="RHX79_001115"
     CDS             9746..10123
                     /locus_tag="RHX79_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
                     /protein_id="HDV2196311.1"
                     /translation="MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSP
                     RFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLL
                     VILACLLFYMWRIPVIDEKQEKH"
     gene            10276..10827
                     /gene="apt"
                     /locus_tag="RHX79_001116"
     CDS             10276..10827
                     /gene="apt"
                     /locus_tag="RHX79_001116"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDV2196312.1"
                     /translation="MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS
                     IDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDL
                     EYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD
                     LGGEQRLEKQGITSYSLVPFPGH"
     gene            10956..12887
                     /gene="dnaX"
                     /locus_tag="RHX79_001117"
     CDS             10956..12887
                     /gene="dnaX"
                     /locus_tag="RHX79_001117"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDV2196313.1"
                     /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS
                     GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE
                     DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ
                     KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDAL
                     SLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGI
                     EWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLI
                     GRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ
                     PQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERL
                     ASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPE
                     LAAKLAAEAIERDAWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNR
                     GAQQKLAEALSTLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNI
                     QTLRRFFDAELDEESIRPI"
     misc_feature    12220..12284
                     /gene="dnaX"
                     /locus_tag="RHX79_001117"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00382"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="DnaX frameshifting element; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00382"
     gene            12940..13269
                     /locus_tag="RHX79_001118"
     CDS             12940..13269
                     /locus_tag="RHX79_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDV2196314.1"
                     /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLIKV
                     TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP
                     PGFKMPF"
     gene            13269..13874
                     /gene="recR"
                     /locus_tag="RHX79_001119"
     CDS             13269..13874
                     /gene="recR"
                     /locus_tag="RHX79_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDV2196315.1"
                     /translation="MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLA
                     QALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS
                     GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
                     CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF"
     gene            13984..15858
                     /gene="htpG"
                     /locus_tag="RHX79_001120"
     CDS             13984..15858
                     /gene="htpG"
                     /locus_tag="RHX79_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003903109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDV2196316.1"
                     /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD
                     KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGT
                     KSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEG
                     EYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG
                     ETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTS
                     LLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNV
                     SREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFAN
                     QEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELL
                     RKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKAL
                     TPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKY
                     IFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS
                     "
     gene            16039..16683
                     /gene="adk"
                     /locus_tag="RHX79_001121"
     CDS             16039..16683
                     /gene="adk"
                     /locus_tag="RHX79_001121"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007706188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDV2196317.1"
                     /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE
                     LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCHNGFLLDGFPRTIPQADAMKEAGIN
                     VDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQ
                     EETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG"
     gene            16815..17777
                     /gene="hemH"
                     /locus_tag="RHX79_001122"
     CDS             16815..17777
                     /gene="hemH"
                     /locus_tag="RHX79_001122"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDV2196318.1"
                     /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLL
                     WWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPETPVALGMSY
                     GSPSLESAVNELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR
                     DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTREL
                     ASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLET
                     LEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR"
     gene            complement(17774..18733)
                     /gene="aes"
                     /locus_tag="RHX79_001123"
     CDS             complement(17774..18733)
                     /gene="aes"
                     /locus_tag="RHX79_001123"
                     /EC_number="3.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl esterase"
                     /protein_id="HDV2196319.1"
                     /translation="MKPENKLPVLDLISAEMKTVVNTLQPDLPSWPATGTIAEQRQYY
                     TLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDT
                     HDRIMRLLASYSQCTVIGIDYTLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIG
                     FAGDSAGAMLALASALWLRDKQIDCGKIAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQ
                     QDLQMYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLA
                     AHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL"
     gene            18885..20189
                     /gene="gsk"
                     /locus_tag="RHX79_001124"
     CDS             18885..20189
                     /gene="gsk"
                     /locus_tag="RHX79_001124"
                     /EC_number="2.7.1.73"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/guanosine kinase"
                     /protein_id="HDV2196320.1"
                     /translation="MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLV
                     DIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNY
                     SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESG
                     ERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKK
                     YNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALD
                     WVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPL
                     RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS
                     SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR"
     gene            complement(20322..21998)
                     /locus_tag="RHX79_001125"
     CDS             complement(20322..21998)
                     /locus_tag="RHX79_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kef family K(+) transporter"
                     /protein_id="HDV2196321.1"
                     /translation="MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAG
                     PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLL
                     GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLV
                     MVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARS
                     AATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP
                     LRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTA
                     LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLA
                     KTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR
                     TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD
                     IEIIARAHYDDEVTYITERGANQVVMGEREIARTMLELLETPPAGEVVTG"
     gene            complement(22236..23456)
                     /gene="fsr"
                     /locus_tag="RHX79_001126"
     CDS             complement(22236..23456)
                     /gene="fsr"
                     /locus_tag="RHX79_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fosmidomycin MFS transporter"
                     /protein_id="HDV2196322.1"
                     /translation="MAMSEQPQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLI
                     LAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLS
                     GLVLLALAGSFGAVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFG
                     SSLGPLLAAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIIN
                     PLPRNKVVLAVSILLILIFSKYFYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAV
                     AAGTVIGGPVGDKIGRKYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASAFS
                     AILVYAQELLPGRIGMVSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLL
                     GMLTIFLPDNRHKD"
     gene            23674..25326
                     /gene="ushA"
                     /locus_tag="RHX79_001127"
     CDS             23674..25326
                     /gene="ushA"
                     /locus_tag="RHX79_001127"
                     /EC_number="3.1.3.5"
                     /EC_number="3.6.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HDV2196323.1"
                     /translation="MKLLQRGVALALLTTFTPASETALAYEQDKTYKITVLHTNDHHG
                     HFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR
                     GMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR
                     QDLKIAVIGLTTDDTAKIGNPEYFTDVEFRKPADEAKLVIQELQQTEKPDIIIAATHM
                     GHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCK
                     PDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVL
                     YTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAA
                     QMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAV
                     AQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPR
                     LDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ"
     gene            complement(25363..25842)
                     /gene="ybaK"
                     /locus_tag="RHX79_001128"
     CDS             complement(25363..25842)
                     /gene="ybaK"
                     /locus_tag="RHX79_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK"
                     /protein_id="HDV2196324.1"
                     /translation="MTPAVKLLEKNKISFQIHTYEHDPAEINFGDEVVKKLGLNPDQV
                     YKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGG
                     ISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD"
     gene            complement(26046..26840)
                     /locus_tag="RHX79_001129"
     CDS             complement(26046..26840)
                     /locus_tag="RHX79_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HDV2196325.1"
                     /translation="MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGS
                     HDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANVPTCEALEERINEEQLQNLQHIS
                     QEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEG
                     AENQITMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQ
                     SLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR"
     gene            26978..27319
                     /locus_tag="RHX79_001130"
     CDS             26978..27319
                     /locus_tag="RHX79_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HDV2196326.1"
                     /translation="MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSAL
                     INNNRKLTTEMAFRLAKVFDTTVDFRLNLQAAVDLWEVENNMRTQEELGRIETVAEYL
                     ARREERAKKVA"
     gene            complement(27433..29937)
                     /gene="copA"
                     /locus_tag="RHX79_001131"
     CDS             complement(27433..29937)
                     /gene="copA"
                     /locus_tag="RHX79_001131"
                     /EC_number="7.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-exporting P-type ATPase CopA"
                     /protein_id="HDV2196327.1"
                     /translation="MSQIIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT
                     GTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQ
                     LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYG
                     AEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL
                     WLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQW
                     FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARLVTDEGEK
                     SVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGESVHAGT
                     VVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALV
                     SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA
                     DALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLAR
                     AILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVGTKAIEAEITA
                     QASQGATPVLLAIDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA
                     IAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGDGINDAPALAQADVGIAMGGG
                     SDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWP
                     FTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE"
     gene            30199..31131
                     /gene="glsA"
                     /locus_tag="RHX79_001132"
     CDS             30199..31131
                     /gene="glsA"
                     /locus_tag="RHX79_001132"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase A"
                     /protein_id="HDV2196328.1"
                     /translation="MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAAVA
                     IVTCDGKVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI
                     ALELHGGKPLSPLVNAGAIATTSLINAENVEQRWQRILHIQQQLAGEQVALSDEVNQS
                     EQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLLNTVELATLGATLAAGGVN
                     PLTHERVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGI
                     AAFSPPLDEEGNSVRGQKMVASVAKQLGYNVFKG"
     gene            31134..32426
                     /locus_tag="RHX79_001133"
     CDS             31134..32426
                     /locus_tag="RHX79_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDV2196329.1"
                     /translation="MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEA
                     STWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTL
                     AVSIAMVARAFGAYAVQFLHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVIL
                     VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADK
                     VKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHV
                     GYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVV
                     LIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVI
                     VGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV"
     gene            32551..32958
                     /gene="cueR"
                     /locus_tag="RHX79_001134"
     CDS             32551..32958
                     /gene="cueR"
                     /locus_tag="RHX79_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HDV2196330.1"
                     /translation="MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHL
                     NELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR
                     DQLLALANACPGDDSADCPIIENLSGCCHHRAG"
     gene            complement(32959..33417)
                     /locus_tag="RHX79_001135"
     CDS             complement(32959..33417)
                     /locus_tag="RHX79_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HDV2196331.1"
                     /translation="MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGL
                     VVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFV
                     LESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS"
     gene            complement(33414..34331)
                     /locus_tag="RHX79_001136"
     CDS             complement(33414..34331)
                     /locus_tag="RHX79_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HDV2196332.1"
                     /translation="MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG
                     LSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS
                     NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIR
                     DVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSA
                     FLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVM
                     MPLEASSLMGSIAGIAELVKDSANKRTQP"
     gene            34477..35154
                     /gene="fetA"
                     /locus_tag="RHX79_001137"
     CDS             34477..35154
                     /gene="fetA"
                     /locus_tag="RHX79_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter ATP-binding protein FetA"
                     /protein_id="HDV2196333.1"
                     /translation="MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGC
                     GKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLI
                     FPWQIRNQQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLL
                     LDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQ
                     EARYELA"
     gene            35141..35920
                     /gene="fetB"
                     /locus_tag="RHX79_001138"
     CDS             35141..35920
                     /gene="fetB"
                     /locus_tag="RHX79_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HDV2196334.1"
                     /translation="MNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAI
                     IQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVG
                     AGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKL
                     SLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ
                     IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK"
     gene            complement(35983..36837)
                     /gene="cnoX"
                     /locus_tag="RHX79_001139"
     CDS             complement(35983..36837)
                     /gene="cnoX"
                     /locus_tag="RHX79_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperedoxin"
                     /protein_id="HDV2196335.1"
                     /translation="MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPI
                     LESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAI
                     RALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA
                     LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAAL
                     ATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYR
                     RQLYALLY"
     gene            complement(36898..37707)
                     /gene="ybbO"
                     /locus_tag="RHX79_001140"
     CDS             complement(36898..37707)
                     /gene="ybbO"
                     /locus_tag="RHX79_001140"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HDV2196336.1"
                     /translation="MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLA
                     GCRKPDDVERMNNMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGP
                     LSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA
                     ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF
                     TLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG"
     gene            complement(37697..38320)
                     /gene="tesA"
                     /locus_tag="RHX79_001141"
     CDS             complement(37697..38320)
                     /gene="tesA"
                     /locus_tag="RHX79_001141"
                     /EC_number="3.1.1.5"
                     /EC_number="3.1.2.14"
                     /EC_number="3.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional acyl-CoA thioesterase I/protease
                     I/lysophospholipase L1"
                     /protein_id="HDV2196337.1"
                     /translation="MNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSA
                     SAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLR
                     GFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVP
                     LLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS"
     gene            38291..38977
                     /locus_tag="RHX79_001142"
     CDS             38291..38977
                     /locus_tag="RHX79_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV2196338.1"
                     /translation="MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGE
                     SGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPT
                     LNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
                     FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLR
                     LVNGQLQEEA"
     gene            38974..41388
                     /locus_tag="RHX79_001143"
     CDS             38974..41388
                     /locus_tag="RHX79_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2196339.1"
                     /translation="MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLS
                     QQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAV
                     DDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQE
                     PDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGSENQLDSYEKWLLPQLK
                     PEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAI
                     LKTLGAGRAQLRKLIVGQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPASL
                     WPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSVVVVL
                     LLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMLLNVLRRMTLKSLPLRLAVSRLLRQP
                     WSTLSQLSAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIATEQVAPLKAF
                     LAEHQIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNW
                     PPKADEVSMEEGLAKRLKVALGDTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFP
                     EGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRALE
                     VMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVSG
                     LVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALLLSLFGGWLGARLVKGKAL
                     FRQFAG"
BASE COUNT         9872 a        10926 c        11059 g         9608 t
ORIGIN      
        1 cgtggttaat actggttttc gtatgagatc ctgagttggt ggttcaatta ctccttaatg
       61 ttcgtaggtt atgcataaaa aaggccgctt gcgcggcctt agtgattaca cgttgtatca
      121 atgatgatcg acagtatggc tgtgctcgat atcttcattc ttgcggctaa agcggcggcg
      181 aaccaccaca aagaataccg gaacgaagaa gattgccagt accgttgcgg tcaccatccc
      241 gcccattaca ccggtaccta ctgcgttctg cgcgccggaa ccagcaccag tactgataac
      301 cagcggcata acgccgagga taaacgccag cgaggtcatc aggatcggac gtaaacgcat
      361 ccgcactgca tcaagcgtcg cttcaatcag acctttacct tctttatcca tcaagtcttt
      421 ggcgaattcg acgataagta tcgcgttctt cgccgacaac ccaatggttg tgagcaggcc
      481 tacctggaag taaacgtcat tggtcaggcc acggaaggtg gcagccagca acgcaccgat
      541 aacccccagc ggaacgacca gcataacgga gaacggaatc gaccagctct cgtacagcgc
      601 cgccagacac aggaatacga caatcaacga aatcgcgtac agtgaaggtg cctggttgcc
      661 ggagaggcgt tcctgatagg acatccccgt ccagtcatag ccaacaccgg taggcagttt
      721 gctcgccagt tgttccatca gctccattgc ttcaccggta cttttacccg gtgccgcctg
      781 gcctaagatt tccatggatg gcaggccatt gtaacgttcc agacgcggcg aaccgtactc
      841 ccaacgagaa gaggagaatg ccgagaacgg caccatctga ccatcagcag cacgaacata
      901 ccagtcgccg atatcatccg gcagcatacg gtatttcgct tctgacatga cgtaaacttt
      961 cttcacacga ccgcggtcga taaagtcgtt cacatagcta ccgccccatg cagcgcccag
     1021 agtggtgtta atgtcattga tagaaacacc cagcgcctgc gctttttcct ggtcgatatc
     1081 aatcttaaac tgcggggtat cttccagacc gtttggacgt acgctggtca acatatcagg
     1141 gtgcttcgct gcttctgcaa gcaactggtt acgcgcctga gtcagttttt cgtgaccaag
     1201 gccagcctgg tcaatcagct caaagtcaaa gccggttgca gtacccagtt ccacgattgc
     1261 gggcaggtta aaggcgaaaa ccatcgcatc tttgatttgc gagaaagcgc gtgttgcacg
     1321 catggtaatc gcttcaactt tgttttcttc gcccggacga tcggcccagt ccttcaagga
     1381 aacgaacgca ataccggtat tctgaccacg tcccgcaaag ccgaagccgt taacggcgaa
     1441 caccgactca acgttgttct tttctttggt cagatagtaa tgcgttacct cattgagcac
     1501 tttctgtgta cgttcctgcg ttgcacctgc tggcagctga accatggtca taaatacgcc
     1561 ctggtcctca tctggcaaga aggagcttgg cagacgcacg aacagatagg ccatgccgac
     1621 cacgatgatc agatacagca ccaggtaacg ccccgtactg cgcagaatac cgcctacgct
     1681 gtcggtgtag tggtgcgtgc tcttctcgaa catgcggtta aaccagccga agaagccttt
     1741 tttaccttcc ccgtgatcgc ctttggcaat cggtttcagc atggtggcac aaagagccgg
     1801 agtcaggatc aacgctacca gtaccgacag cgccattgct gaaacaatgg taatagagaa
     1861 ctgacgatag atagcaccag tagaaccgcc aaagaaggcc atcggtacga ataccgctga
     1921 cagtaccatc gcgataccga ccagagcgcc ctgaatctgc cccatcgact tacgggtagc
     1981 ttcttttggc ggcaaacctt cttccgccat aacacgctcc acgttttcta ccacaacgat
     2041 agcgtcatcc accaacaagc cgatggcgag caccatcccg aacattgtta gcgtgtttat
     2101 cgagaagcca aaggcggcaa ggacggcaaa ggtcccgagc aataccaccg gtacggcaat
     2161 ggtcggaatc aacgtcgcgc ggaagttctg caggaacaga tacataacca ggaacacgag
     2221 gatgatcgct tcgaccagcg ttttaaccac ttcgtgaata gagattttca cgaacggcgt
     2281 ggtgtcgtac gggtaaacaa ttttcagacc cgacgggaag aacggttcca tcttcgccag
     2341 ttcagcacgg attgccgcag cggtatccag cgcgtttgca ccggtcgcca gcttgatccc
     2401 cagaccggaa gccggttggc cgttaaactc tgcgatgatg tcgtagttct caccacccag
     2461 ctcaatcttc gccacatcac gcagcagtac gcgggaacca tcctgattca ctttcagcag
     2521 gattttgccg aactcttcag tagaggtcag acgcgtctga gcaataatag aggcgttaag
     2581 ctgttggcct ttcaccggcg gcgtaccacc gagctgaccc gccgcaacct gggcgttctg
     2641 cgctttgatg gcggtaatga catcaaccgg cgttagctgg aatttgttca gctcattcgg
     2701 gttcatccag atacgcatcg cgtactgtga accgaacaac tgaacatcac ccacgcccga
     2761 cgtacggctg atggcatctt tcatattcgc cgctacgtag tcagagatat cctcctgcgt
     2821 catggtgcca tcggtgttga taacgccgac aaccatcagg aagctgctgg atgatttctc
     2881 aacgctcacc ccttgctgct gaacttcttg cggcagcaac ggcatcgcca gctgcagttt
     2941 gttctgcacc tgaacctgcg cgatatccgc atcagtacca gactcaaagg tcagggtgat
     3001 ctgcacggta cccgtggagt cactgttaga ggacatgtac atcaggttat cgataccgtt
     3061 catattctgt tcgataacct gtgtcaccgt gtcctgcact gttttcgcat cagcgccggg
     3121 gtaggaggcg gagatcgtta ctgccggcgg tgcaatcgta ggatattgcg ccaccggcag
     3181 tttgaggatc gccagccccc ctgccaacat gatgataatg gcgatcaccc acgcaaaaat
     3241 cgggcgatcg ataaagaaat taggcatgtc ttaacggctc ctgtttaagt taagacttgg
     3301 actgttcagg ctgagcaccg cttgcggctt gctggttatt atcagcggta acttcttgtg
     3361 cttttacctg gacaccagga cgcactttct gcagcccact tattactacg cgatcgcctg
     3421 ctttcagacc ttctgtcacc agccacttat cgccaatagc ctggcttgca acgatcggac
     3481 gggtttccac tttgtcatcc gcgccaacta ccagtacggt ggcatcacca cgcggcgtac
     3541 gggttacgcc ctgttgcggg actaaaatag cgtttggatt aagcccttct tccagacgtg
     3601 cgcgcacgaa catacccggc agcagagtgt gatccgggtt cgggaagata gcgcgtaggg
     3661 tgatagaccc agtggtctga tcaacggtaa cgtcagagaa ttccagcgta ccgtcctgcg
     3721 ggaacttaat gccgtcactg gtgatcagcg acactttggc tttgccgttc tcttgtttca
     3781 gcgtgccatt cgccagttcc tgtttcaggc gcaggaagtc gttgctggac tgggtcacat
     3841 caacgtagat cggatcaagt tgctgcacgg ttgccagcgc agtcgcctga ccgttctgta
     3901 ccaatgcgcc ttccgtcacg ttcgacttac caatgcgacc gctaatcgga gaggtgactt
     3961 tggtgtaagc cagattgatc cgcgcagttt caacggcagc tttcgccgca gttaccgcag
     4021 cattcgcctg ttgcgcatca gccagagcct gatcgtactc ttgcttactg atgtactgag
     4081 taccgagcag tttctgataa cgattcaccg tcaattgcgc gatattggct gcagcctggg
     4141 ctttcgccag atcacctttc gcactgtcgt atgtcgcctg ataggtcgca ggatcaatct
     4201 gatagagaga gacacctgct tcgatgtcgc taccttcttt gaaattacgc ttcaggataa
     4261 tcccgctaac ttgaggacga acttctgcga tccggtaggc actggtgcga cccggaagct
     4321 cggttgtgat ctgcagaggt tcagttttga ctgttactac gccaacggcg ggcatctgct
     4381 ggccaccttg ttgggcctgt ttgtcgtcac atcctgttag ggctaagctg cctgagagca
     4441 tcagaacgac cgccagaggc gtaaaccctc tgtttttgtt catatgtaaa cctcgagtgt
     4501 ccgatttcaa attggtcaat ggtcaaaagt taataaaccc attgctgcgt ttatattatc
     4561 gtcgtgctat ggtacataca ttcacaaatg tatgtaaatc taacgcctgt aaattcacga
     4621 acatatggca cgaaaaacca aacaagaagc gcaagaaacg cgccaacaca tcctcgatgt
     4681 ggctctacgt cttttctcac agcagggggt atcatccacc tcgctgggcg agattgcaaa
     4741 agcagctggc gttacgcgcg gtgcaatcta ctggcatttt aaagacaagt cggatttgtt
     4801 cagtgagatc tgggaactgt cagaatccaa tattggtgaa ctagagcttg agtatcaggc
     4861 aaaattccct ggcgatccac tctcagtatt aagagagata ttaattcatg ttcttgaatc
     4921 cacggtgaca gaagaacgac gtcgattatt gatggagatt atattccaca aatgcgaatt
     4981 tgtcggagaa atggctgttg tgcaacaggc acaacgtaat ctctgtctgg aaagttatga
     5041 ccgtatagaa caaacgttaa aacattgtat tgaagcgaaa atgttgcctg cggatttaat
     5101 gacgcgtcgg gcagcaatta ttatgcgcgg ctatatttcc ggcctgatgg aaaactggct
     5161 ctttgccccg caatcttttg atcttaaaaa agaagcccgc gattacgtcg ccatcttact
     5221 ggagatgtat ctcctgtgcc ccacgcttcg taatcctgcc actaacgaat aaccctgaat
     5281 ctgactccag gatttttcct ggacattttc gtcgttgcta ttctggttca ctgcgtcgtg
     5341 atattcttgc ggtttgactt tttcaggtcg ttcttcaggt tcagaaacct tcattcatca
     5401 tgactatgtt ccagtattac aaacgatcac ggcattttgt tttttcagca tttattgctt
     5461 ttgtttttgt cttgttatgc cagaacacgg cgtttgcgcg ggcgtcatcg aatggtgatc
     5521 tgccgacaaa agcggacctg caggcgcaac ttgactcact aaataaacaa aaagatcttt
     5581 ctgctcagga caaactggtg cagcaggatc tgacagatac attagccacc ctcgataaaa
     5641 tcgatcgcat aaaagaagag acagttcagc tacggcaaaa agtcgctgaa gcgccggaaa
     5701 aaatgcgcca ggcgaccgcg gcgttaacag cacttagcga tgtcgataac gacgaagaaa
     5761 cgcgcaaaat tctgagtacg ctttcgttgc gccagctgga aactcgcgtt gcccaggcgc
     5821 tggacgattt gcaaaacgca caaaacgatc tggcgtctta taacagccag ctggtttcgt
     5881 tacagacgca gcccgaacgc gtgcaaaatg cgatgtataa cgcttcgcag cagctgcaac
     5941 aaattcgcag tcgtctggat gggactgatg tcggcgagac tgccttacgt cccagccaga
     6001 aagtgttaat gcaggctcag caggcgttgc tgaatgcgga gattgaccag cagcgtaaaa
     6061 gcctggaagg gaacaccgtc ttgcaggata ccttgcaaaa gcaacgtgat tacgtgacgg
     6121 cgaacagcgc ccgtctggag caccagttgc agctgttgca agaagcggta aacagcaagc
     6181 gcctgacttt aactgaaaaa acggcgcagg aagccgtctc cccggatgaa gccgcgcgta
     6241 ttcaggctaa tccgctggtg aaacaggaac tggaaattaa ccagcagtta agtcagcgtc
     6301 tgattaccgc gactgaaaac ggtaatcagt tgatgcagca aaacattaaa gtcaaaaact
     6361 ggctggagcg ggcgctgcaa tcggaacgca atattaaaga gcagattgcc gtcctgaagg
     6421 gcagcctgct gttgtctcgt atcctttacc agcaacaaca aacgctgccc tcggcggatg
     6481 aactggaaaa catgaccaac cgcatcgcgg atttgcgtct cgaacagttt gaagttaacc
     6541 agcagcgtga tgcacttttc cagagcgatg cgttcgtcaa caaactggaa gaaggtcaca
     6601 ccaacgaagt caacagcgaa gttcacgatg cgttattgca agtggttgat atgcgtcgcg
     6661 aattgctgga tcaactcaac aaacagttgg gtaaccagct gatgatggcc attaacctgc
     6721 aaatcaacca gcagcagtta atgagcgtat cgaaaaacct gaaatccatc ctgactcagc
     6781 aaatcttttg ggtgaacagt aaccgtccaa tggactggga ctggatcaaa gcgttcccgc
     6841 aaagcctgaa agatgaattt aagtcgatga aaatcacggt gaactgggaa aaagcctggc
     6901 ctgccgtttt tatcgctttc ctcgccggtt tgccgctgct gttgattgcc gggctgatcc
     6961 actggcgtct gggctggctg aaagcgtatc aacagaaact ggcttccgct gtgggttccc
     7021 tgcgtaacga tagccagctc aacacaccaa aagcgatcct tatcgacctg atccgcgcgc
     7081 tgccggtgtg cctgattatt ctcgcggttg gcctgattct gttgaccatg cagctcaaca
     7141 tcagcgaact gctatggtcg ttcagtaaaa aactggcgat tttctggctg gtgtttggcc
     7201 tgtgctggaa ggtactggag aaaaatggcg ttgccgtgcg tcacttcggc atgccggagc
     7261 agcagaccag ccactggcgt cggcaaattg tccgcatcag tctcgcgttg ctgcctatcc
     7321 atttctggtc tgtggtagca gaactttccc cgctgcatct gatggatgat gtgctggggc
     7381 aggcgatgat tttcttcaac ctgctgctga ttgccttcct ggtatggcca atgtgccgcg
     7441 aaagctggcg tgataaagag tcgcacacca tgcgactggt caccattacc gtgctatcga
     7501 ttatcccgat tgcgttgatg gtgctgactg ccacgggtta tttctacacc acgctgcgcc
     7561 tctccgggcg ttggattgaa accgtttatt tggtgatcat ctggaacctg ctgtaccaga
     7621 cggtattgcg cggcttaagc gtagcggcgc ggcgtatcgc ctggcgtcgt gcgctggcgc
     7681 gtcggcagaa tctggtgaaa gagggcgcag aaggtgccga accgccggaa gaacccacca
     7741 ttgcactgga gcaagttaac cagcagacgc tgcgtattac catgttgctg atgtttgcgc
     7801 tgttcggtgt catgttctgg gcaatttggt ccgatttgat caccgtgttc agctatctcg
     7861 acagcatcac gctctggcat tacaacggca ctgaagctgg cgctgcggtg gtgaaaaacg
     7921 tcaccatggg cagtctgttg tttgcgatta tcgcctcaat ggtggcctgg gcgttgattc
     7981 gcaacctgcc tggtttactg gaagtgctgg tgctctcgcg actgaatatg cgtcagggcg
     8041 cgtcgtatgc cattactacc atccttaact acatcattat tgccgttggt gcgatgacgg
     8101 tgttcggatc gctgggcgtc tcttgggata aactccagtg gctggccgca gcattatccg
     8161 taggtcttgg ttttggttta caagaaattt tcggtaactt cgtctccggt ttgatcattc
     8221 tgttcgaacg tccggtgcgt attggcgata cggtaaccat tggtagcttc tcggggacgg
     8281 taagtaagat ccgtattcgt gcgacaacga ttaccgattt cgatcgcaaa gaagtgatca
     8341 tcccgaacaa agcgtttgtt accgagcgtc tgatcaactg gtcgttgact gacactacta
     8401 cgcgtctggt gatccgtctc ggcgtggcct atggctccga tctggaaaaa gtgcgtaaag
     8461 tgttactgaa ggcggcgact gagcacccaa gggtgatgca cgaaccaatg ccggaagtct
     8521 tctttacggc gtttggtgcc agcacgttgg atcatgagct gcgtctgtat gtgcgtgaac
     8581 tgcgtgaccg tagtcgtact gtcgatgagc tgaaccgtac tatcgatcag ctgtgccgtg
     8641 aaaacgacat caacattgcc tttaaccagc ttgaagtgca tctgcacaac gagaagggcg
     8701 atgaggtgac ggaagtcaaa cgcgactaca aaggcgatga cccgacgcca gcggtagggt
     8761 aataaccaaa ggtggcgaca tttagttgcc ccgagattac tgacaaagtg cgcgttgttc
     8821 atgccggatg cggcgtgacc gccttatccg gcctacgaaa ccgcaagaat tcaatgtatt
     8881 gcaggagcgg tgtaggcctg ataagcgtag cgcatcaggc agttttgcgt ttgcccacaa
     8941 tcttagggga catttagcgg ccccatttat ttctcacttt tccgcctcat catcgcgcgt
     9001 taatttcttt tcataatcgc gttttacaat atccagcgcg cgcagcacgg tgcgggctgg
     9061 gatctgattt tcttccagca gcacaatcaa atcgacagcc agtttgacat cgtcaggggc
     9121 attttccagt gacatactct ctccattgct agcgggttaa gcgcgctagc ctgttttcga
     9181 ttttttccag cgcatggcgg cagcgtgcca ggcgcgcttc ataggcttcc acttcacgat
     9241 gcagcgtttg ctgttccacg agatcggtca cccgcgccag gcgggctctg cgttcggcaa
     9301 ccatctcacg tagccgccgc tcaaaatcct gatgctgaat acgtttacgc tgccagcggg
     9361 caattttcgg tggcgcactg tcccactcgc gcaatgacca ggcggaggct tcacgcgcga
     9421 tggcttccag ttgtgccgcc agatgttccg ccagccaggc cacttgcggc agctgttgct
     9481 gctcaactgc atgacgaagc gcagccagat tatcgcccgc ctcatcgaga caagcctgca
     9541 gtgttgtcgc acgggtttga aaaaggtgtc tgtcaaaacg ggcacttagc gtggcaaatt
     9601 gcgctaccgg ggcacaacgc tgacgcagcg tagcgagctg tccttccagt ttttccagca
     9661 gcagggcggt tttcacgata agacctcaat gaaaatgata attgttatgc taaagtagcc
     9721 actctgtaag ctgacaacac tcaatatgca acgaatcatt ttaatcatca ttggctggct
     9781 ggcggtagtg ctgggtacgc tgggcgtggt attaccggta ttaccgacga cgccgtttat
     9841 cctgctggcg gcctggtgct ttgcccgttc ttccccgcgc tttcacgctt ggttgctgta
     9901 ccgctcatgg tttggcagct atctacgttt ctggcagaaa catcatgcga tgccgcgcgg
     9961 cgtcaaaccg cgggcgattt tgcttatttt gctcacgttt gccatttctc tgtggttcgt
    10021 ccagatgcca tgggtgcgca tcatgttgct ggtaattctc gcctgtttgc ttttctatat
    10081 gtggcgaatt ccggtgattg atgaaaagca agaaaagcac tgaagcacaa caatcgcagt
    10141 tgcaattatt gcgtacagcc agtacattct ggcgttttcg agcacaggcg caggcggtca
    10201 aaggttaaac aactgttact tttgatacgt ttaaaacgcg ccgtgagtac caccgtaaca
    10261 agcaggcata cacttatgac cgcgactgca cagcagcttg agtatctcaa aaatagcatc
    10321 aaaagcattc aggactaccc aaaacccggc attcttttcc gcgatgtcac cagcttactg
    10381 gaagacccga aagcttacgc tctcagcatc gacttgctgg ttgagcgtta caaaaatgcg
    10441 ggcattacca aagttgtcgg caccgaagcg cgtggcttct tgtttggcgc tccggtagct
    10501 ctgggtctgg gcgttggctt tgtaccggtc cgtaaaccgg gcaaactgcc gcgtgaaacc
    10561 atcagtgaaa cttacgacct ggaatacggc accgatcagc tggagatcca cgttgatgcc
    10621 atcaaaccgg gcgacaaagt tctggtggtg gacgatctgc tggcaaccgg cggcactatc
    10681 gaagcgaccg ttaaactgat ccgtcgtctg ggtggtgaag tggctgacgc tgcgttcatt
    10741 atcaacctgt tcgatctcgg cggcgaacag cgtctcgaaa aacagggcat taccagctac
    10801 agccttgtcc cgttcccggg ccattaatta tcgccagtct tgtgctgccc acgctacgga
    10861 cagcacaaga tgtgcattca gcctcgccgt tctgacgggg ctgtgttagc attacccctt
    10921 cgtgaatcca ccttccagcg tttcagagcc tgccaatgag ttatcaggtc ttagcccgaa
    10981 aatggcgccc acaaaccttt gctgacgtcg tcggccagga acatgtgctg accgcactgg
    11041 cgaacggctt gtcgttaggg cgtattcatc atgcttatct tttttccggt acccgtggcg
    11101 tcggaaaaac ctctatcgcc cgactgctgg cgaaggggct aaactgcgaa accggcatta
    11161 ccgcgacgcc gtgcggcgtg tgcgataact gtcgtgaaat cgagcagggg cgctttgtcg
    11221 atctgattga aatcgacgcc gcctcgcgca ccaaagttga agatacccgc gacctgctgg
    11281 ataacgtcca gtacgctccg gcgcgtggtc gtttcaaagt ttatctgatc gacgaagtgc
    11341 atatgctgtc gcgccacagc tttaacgcac tgttaaaaac ccttgaagag ccgccggagc
    11401 acgttaagtt tctgctggcg acgaccgatc cacagaaatt gccggtgacg attttgtcgc
    11461 gctgtttgca atttcatctc aaggcgctgg atgtcgagca aattcgccat caacttgagc
    11521 acatcctcaa cgaagaacat atcgctcacg agccgcgggc gttgcaattg ctggcgcgcg
    11581 ccgctgaagg cagcctgcga gatgccttaa gtctgaccga ccaggcgatt gccagcggtg
    11641 acggccaggt ttcaacccag gcagtcagtg cgatgctggg tacgcttgac gacgatcagg
    11701 cgctgtcgct ggttgaagcg atggtcgagg ccaacggcga gcgcgtaatg gcgctgatta
    11761 atgaagccgc tgcccgtggt atcgagtggg aagcgttgct ggtggaaatg ctcggcctgt
    11821 tgcatcgtat tgcgatggta caactttcgc ctgctgcact tggcaacgac atggccgcca
    11881 ttgagctgcg gatgcgtgaa ctggcgcgca ccataccgcc gacggatatt cagctttact
    11941 atcagacgct gttgattggt cgcaaagaat taccgtatgc gccggaccgc cgcatgggcg
    12001 ttgagatgac gctgctgcgc gcgctggcgt tccatccacg tatgcctctg cctgagccag
    12061 aagtgccacg ccagtccttt gcgcccgtcg cgccaacggc agtaatgacg ccaacccagg
    12121 tgccgccgca accgcaatca gcgccgcagc aggcaccgac tgtaccgctc ccggaaacca
    12181 ccagccaggt gctggcggcg cgccagcagt tgcagcgcgt gcagggagca accaaagcaa
    12241 aaaagagtga accggcagcc gctacccgcg cgcggccggt gaataacgct gcgctggaaa
    12301 gactggcttc ggtcaccgat cgcgttcagg cgcgtccggt gccatcggcg ctggaaaaag
    12361 cgccagccaa aaaagaagcg tatcgctgga aggctaccac tccagtgatg cagcaaaaag
    12421 aagtggtcgc cacgccgaag gcgctgaaaa aagcgctgga acatgaaaaa acgccggaac
    12481 tggcggcgaa gctggcggca gaagccattg agcgcgacgc gtgggcggca caggtgagtc
    12541 aactttcgct accaaaactg gtcgaacagg tggccttaaa tgcctggaaa gaggagagcg
    12601 acaacgcagt atgtctgcat ttgcgctcct ctcagcggca tttgaacaac cgcggtgcac
    12661 agcaaaaact ggctgaagcg ttgagcacgt taaaaggttc aacggttgaa ctgactatcg
    12721 ttgaagatga taatcccgcg gtgcgtacgc cgctggagtg gcgtcaggcg atatacgaag
    12781 aaaaacttgc gcaggcgcgc gagtccatta ttgcggataa taatattcag accctgcgtc
    12841 ggttcttcga tgcggagctg gatgaagaaa gtatccgccc catttgatcg taagcacagc
    12901 ttacgttcgt catccttaac gtgattgaga gagaaaccta tgtttggtaa aggcggtctg
    12961 ggtaacctga tgaagcaagc ccagcagatg caagaaaaaa tgcagaaaat gcaggaagag
    13021 atcgcgcagc tggaagtcac cggcgaatct ggcgcaggtc tgataaaagt gaccatcaac
    13081 ggtgcacaca actgccgtcg cgtagagatc gacccgagcc tgctggaaga cgacaaagag
    13141 atgctggaag acctggtggc tgcagcattc aacgacgcag cacgtcgtat tgaagaaacg
    13201 cagaaagaaa aaatggcctc tgtatcctcc ggaatgcagc tgccgcctgg ctttaagatg
    13261 ccgttctgat gcaaaccagc ccgctgttaa cacagcttat ggaagcactg cgctgtctgc
    13321 cgggcgttgg cccgaagtcg gcgcagcgta tggcgttcac gctgcttcag cgcgatcgta
    13381 gcggcgggat gcgtctggcg caggcgctca cccgggcgat gtcggaaatc ggccactgcg
    13441 ccgattgccg cactttcacc gaacaggaag tctgtaacat ctgttcgaat ccgcgtcgtc
    13501 aggaaaacgg tcaaatctgt gtggtggaga gtccggcgga catctacgcc attgagcaga
    13561 cggggcagtt ttcaggccgt tattttgtgt tgatggggca tctgtcaccg ctggacggca
    13621 tcggtccgga tgatatcggg cttgatcgtc tggaacagcg tctggcagag gaaaaaatca
    13681 ctgaagtgat cctcgccacc aatcccacgg ttgaaggtga agctaccgct aactacattg
    13741 ccgagctttg cgcgcaatat gacgtggaag ccagccgaat cgctcatggc gtaccggttg
    13801 gcggcgaact ggaaatggtc gatggcacca cgctgtcaca ctcccttgcc gggcgtcata
    13861 agattcgttt ttaagcaaac gagagcagga tcacctgctc tcgcttgaaa ttattctccc
    13921 ttgtccccat ctctccctca tcctgttttt aaccttaaaa tggcattatt gaggtagacc
    13981 tacatgaaag gacaagaaac tcgtggtttt cagtcagaag tgaaacagct tctgcacctg
    14041 atgatccatt ctctctattc caataaagaa atcttcctgc gtgagcttat ctctaacgcc
    14101 tccgatgcgg cggacaagct gcgtttccgt gcgctatcta acccggacct gtacgaaggt
    14161 gatggcgaac tgcgcgttcg tgtctctttc gataaagaca agcgcacgct gaccatctcc
    14221 gataacggcg tggggatgac ccgcgacgaa gtgattgacc atctggggac tatcgctaaa
    14281 tccggtacca aatcattcct cgaatccctg ggttctgacc aggcgaaaga cagccagctg
    14341 atcggtcagt tcggtgttgg tttctactct gcgtttatcg tggccgacaa agtgaccgtg
    14401 cgtactcgcg cggcaggcga aaaaccagaa aatggcgtgt tctgggaatc ggctggcgaa
    14461 ggtgaataca ccgttgccga catcaccaaa gaagatcgtg gtactgaaat caccctgcat
    14521 ctgcgtgaag gcgaagacga gttcctcgat gactggcgcg tgcgttccat cattagcaaa
    14581 tactccgacc atatcgcgct gccggtagag atcgaaaaac gcgaagagaa agacggcgaa
    14641 accgttatct cctgggaaaa aatcaacaaa gcgcaggcgc tgtggactcg taacaagtcg
    14701 gaaatcaccg atgaagagta caaagagttc tacaaacaca tcgcccacga ctttaacgat
    14761 ccgctgacct ggagccacaa ccgtgttgaa ggtaagcagg agtacaccag cctgctgtac
    14821 attccgtccc aggctccgtg ggatatgtgg aaccgcgatc ataaacacgg cctgaaactg
    14881 tacgtccagc gtgtgttcat catggacgac gcagaacagt tcatgccgaa ctatctgcgc
    14941 ttcgtgcgtg gtctgattga ctccagcgat ctgccgctga acgtttcccg tgaaatcctc
    15001 caggacagca cggtaacgcg taacctgcgc aatgcgctga ccaagcgtgt gctgcaaatg
    15061 ctggaaaaac tggcgaaaga cgacgcggaa aaataccaga ccttctggca acagtttggc
    15121 ctggtactga aagaaggtcc ggcggaagat ttcgctaacc aggaagcgat cgccaaactg
    15181 ctgcgttttg cttctactca taccgattct tctgcgcaga ccgtgtctct ggaagactac
    15241 gtttcccgca tgaaagaagg gcaggagaaa atctactaca tcactgcaga cagctatgcg
    15301 gcagcgaaga gcagcccgca cctggaactg ctgcgtaaga aaggcatcga agttctgctg
    15361 ctttccgacc gcatcgatga gtggatgatg aactatctga ctgagttcga cggtaaaccg
    15421 ttccagtcgg tgtctaaagt tgacgagtcg ctggaaaaac tggctgacga agttgatgag
    15481 agcgcgaaag aagcggagaa agcactgact ccgttcatcg accgtgtgaa agccctgctc
    15541 ggcgagcgcg tgaaagatgt ccgtctgact caccgtctga ccgatacgcc agcgatcgtt
    15601 tcgaccgacg cggacgaaat gagcactcag atggcgaaac tgttcgctgc ggcgggccag
    15661 aaagtgccag aagtgaaata catcttcgaa ctgaacccgg atcacgtact ggtgaaacgt
    15721 gcggcagata ctgaagatga agccaagttc agcgagtggg tagaactgct gctggatcag
    15781 gcgctgctgg cagaacgcgg cacgctggaa gatccgaacc tgtttattcg tcgtatgaac
    15841 cagctgctgg tttcctgatg tcatgccgga tgacctttgt gtcatccggc atttttcttt
    15901 tcattatctg cactttccgc aaattatctc gccattaacc gtttcagccc ctggtgcctt
    15961 tcttgaggca atcgcctgat ggtggtatcg tttatcgctt tttcaaaaaa ttcgacacat
    16021 tttaagggga ttttcgcaat gcgtatcatt ctgcttggcg ctccgggcgc ggggaaaggg
    16081 actcaggctc agttcatcat ggagaaatat ggtattccgc aaatctccac tggcgatatg
    16141 ctgcgtgctg cggtcaaatc tggctccgag ctgggtaaac aagcaaaaga cattatggat
    16201 gctggcaaac tggtcaccga cgaactggtg atcgcgctgg ttaaagagcg cattgctcag
    16261 gaagactgcc ataatggttt cctgttggac ggcttcccgc gtaccattcc gcaggcagac
    16321 gcgatgaaag aagcgggcat caatgttgat tacgttctgg aattcgacgt accggacgaa
    16381 ctgatcgttg accgtatcgt cggtcgccgc gttcacgcgc cgtctggtcg tgtttatcac
    16441 gttaaattca atccgccgaa agtagaaggc aaagacgacg ttaccggtga agaactgact
    16501 acccgtaaag atgatcagga agagaccgta cgtaaacgtc tggttgaata ccatcagatg
    16561 acagcaccgc tgatcggcta ctactccaaa gaagcggaag cgggtaatac caaatacgcg
    16621 aaagttgacg gcaccaagcc ggttgctgaa gttcgcgctg atctggaaaa aatcctcggc
    16681 taatcaagcc gcagcagatc tgctttcggg caggtctgct catcctcctc aggcaatacc
    16741 tcttacagca attagttctt cttcttcact tttccgctac aattatcaac aagttgaatc
    16801 gataagaggc ggtaatgcgt cagactaaaa ccggtatcct gctggcaaac ctgggtacgc
    16861 ccgatgcccc cacacctgaa gcggtaaaac gctatctgaa acaattttta agcgacagac
    16921 gcgtggttga tacctcacgg ttgttatggt ggccattgct gcgcggcgtg attttgccgc
    16981 tgcgctcgcc gcgtgtggcg aagctgtatg cctctgtctg gatggaaggt ggctcgccgc
    17041 tgatggttta cagccgccag caacagcagg cgctggcaca acgtttaccg gagacgcccg
    17101 tagcgctggg aatgagctac ggctcgccat cactggaaag cgccgtaaat gaactcctgg
    17161 cagagcatgt agatcatatt gtggtgctgc cgctttatcc gcaattctcc tgttctacgg
    17221 tcggtgcggt atgggatgaa ctggcacgca ttctggcgcg caaacgtagc attccgggga
    17281 tatcgtttat tcgtgattac gccgataacc acgattacat taatgcactg gcgaacagcg
    17341 tacgcgcttc ttttgccaaa catggcgaac cggatctgct gctgctctct tatcatggca
    17401 ttcctcagcg ttatgcagat gaaggcgatg attacccgca acgttgccgc acaacgactc
    17461 gcgaactggc ttccgcactg gggatggcac cggaaaaagt gatgatgacc tttcagtcgc
    17521 gctttggccg ggaaccctgg ctgatgcctt ataccgacga aacgctgaaa atgctcggag
    17581 aaaaaggcgt aggtcatatt caggtgatgt gcccgggctt tgctgcggat tgtctggaga
    17641 cgctggaaga gattgccgag caaaaccgtg aggtcttcct cggtgccggc gggaaaaaat
    17701 atgaatatat tccggcgctt aatgccacgc cggaacatat cgaaatgatg gccaatcttg
    17761 ttgccgcgta tcgctaaagc tgagcggtaa agaactgagc gccgtcgcga agagcctcgt
    17821 cggcggtttt catcatccgt gaataatgca aaaaggcatg cagcgtacct gggtagagtt
    17881 tgaactcaca gggctgctga tgcgccgcta acgtctggta aagcagacgg ctgtcatcca
    17941 gcagcggatc gaactccgcc ccggcaataa aacagggcgg aacttcgcga gtgagatcat
    18001 tattaaacag acagtaatac ggtgactcgc ggtccgcgtc gttgcttaaa tacgcctctt
    18061 catacatctg caaatcctgt tgcgttaagc catcccagac accgcccaac agacgacgag
    18121 tcacggaatc ccgtaatccg taaagcccat accacagcaa aacacccgca attttaccgc
    18181 aatcgatctg tttatcacgc aaccacaacg cactggcgag cgccagcatg gcacctgcgg
    18241 aatcaccggc aaagccaatg cgggacatat tgatttgata atcctccgcc tgctggtgga
    18301 aataacaaca agcagccaca atttcctcta tcgcttgcgg aaaacgcgct tcaggtgaaa
    18361 gggtgtaatc aatgccaatc accgtacatt ggctgtagct tgccagcagg cgcatgatgc
    18421 gatcgtgggt atcgagattg ccgagaataa aaccgcctcc atgcaaataa aatagcgtcg
    18481 ccgggctatc tggctgcgga caaaagagac gtgtttccac ctgcccatat tttgttggaa
    18541 ccatgtaagc tctggttgcc atttctggag cgcccgcatt ccagaatcgg cgctcaagcg
    18601 tgtaatactg tcgttgctca gcaatcgttc ccgttgcggg ccaggacggt aaatccggct
    18661 gaagagtatt cacaacggtc ttcatttcag cagaaataag gtccagaaca ggtagtttgt
    18721 tttccggctt catacaaaaa ctcctttcaa attacgtcat tgtaaggaac cactgccatg
    18781 aaaatgcgat cccgcctgct gatattgaaa ctggctgcgt ctcgcgcgct cccgtcagat
    18841 tgtgttaaca ttcgccgctc agttaaccac ccgtaaaaac aaccatgaaa tttcccggta
    18901 aacgtaaatc caaacattac ttccctgtaa atgcacgcga tccgctgctt cagcaattcc
    18961 agccagaaaa cgaaaccagc gccgcctggg tcgtaggtat tgaccagacg ctggtcgata
    19021 ttgaagcgaa agtggatgat gaattcattg agcgttatgg attaagcgcc gggcattcac
    19081 tggtgattga ggatgacgta gccgaagcgc tttatcagga gctaaaacag aaaaacctga
    19141 ttacccatca gtttgcgggt ggcaccattg gtaacaccat gcacaactac tcggtgctcg
    19201 cggacgaccg ttcggtgctg ctgggcgtca tgtgcagcaa tattgaaatt ggcagttatg
    19261 cctatcgtta cctgtgtaac acttccagcc gtaccgatct taactatcta caaggcgtgg
    19321 atggcccgat tggtcgttgc tttacgctga ttggcgagtc cggggaacgt acctttgcta
    19381 tcagtccagg ccacatgaac cagctgcggg ctgaaagcat tccggaagat gtgattgccg
    19441 gagcctcggc actggttctc acctcttatc tggtgcgttg caaaccgggt gaacccatgc
    19501 cggaagcaac catgaaagcc attgagtacg cgaagaaata taacgtaccg gtggtgctga
    19561 cgctgggcac caagtttgtc attgccgaga atccgcagtg gtggcagcaa ttcctcaaag
    19621 accacgtttc tatccttgcg atgaacgaag atgaagccga agcgttgacc ggagaaagcg
    19681 atccgttgtt ggcatctgac aaggcgctgg actgggtaga tctggtgctg tgcaccgccg
    19741 ggccaatcgg cttgtatatg gcgggcttta ccgaagacga agcgaaacgt aaaacccagc
    19801 atccgctgct gccgggcgct atagcggaat tcaaccagta tgagtttagc cgcgccatgc
    19861 gccacaagga ttgccagaat ccgctgcgtg tatattcgca cattgcgccg tacatgggcg
    19921 ggccggaaaa aatcatgaac actaatggag cgggggatgg cgcattggca gcgttgctgc
    19981 atgacattac cgccaacagc taccatcgta gcaacgtacc aaactccagc aaacataaat
    20041 tcacctggtt aacttattca tcgttagcgc aggtgtgtaa atatgctaac cgtgtgagct
    20101 atcaggtact gaaccagcat tcacctcgtt taacgcgcgg cttgccggag cgtgaagaca
    20161 gcctggaaga gtcttactgg gatcgttaag ttatcgtcgg ttcgtaggcc agataaggcg
    20221 ttcacgccgc atctggcatt tggctctcga tgcccgatgc gacgctggcg cgtcttatca
    20281 tgcctacata tttttcatat tttacatccg gcaaccaccg tttaccccgt caccacttca
    20341 cccgccggtg gcgtttccag cagttccagc atagtacggg caatttcacg ttcacccatc
    20401 actacctgat tcgcgccacg ttcggtgata tacgtcactt catcgtcata atgggcgcgg
    20461 gcgataatct caatatccgg gtttttcgcg cgggcagacg ccacaatctc acccgcttca
    20521 taaccgttgg ggatcgtcag gatcagccat tttgcacatt ccagatgcgc cagttgcata
    20581 atttcttcgt tcgctgcatt gcccaataca gcgcggaccc cacgctctcg cagctcatca
    20641 acacgggttc gtgacgtctc aatcaccacc agcggaatat cagaggcgag caatttctcc
    20701 cccagcaggc tgcctacacg accgtaaccc accaatagcg catggttgca aatatccact
    20761 gggatctgtt tctcttcttc gattgcctct tccagcgtct gctcttccag cgtttcggtc
    20821 ttcgccagat atttctccag tagtgcgaac agtaccgggt tgagcataat cgacaggatc
    20881 gcccctgcca gtaccaggtt ttgtccggcc tgcggcagta aattcaatgc cattcccagt
    20941 cccgccagga taaacgcgaa ctcaccaatc tgcgccaggc tggcggcgat ggttaatgcc
    21001 gtacgttggg agtgaccaaa cagtcgcacc aggaaaaatg cggctaacga cttaccaaac
    21061 agaataatcg ccagcgtcgc cagcactgcc agcggttgct gaatcagaat taacggatca
    21121 aacaacatcc cgacggagac aaaaaacagc accgcaaacg cgtcgcgcaa tggcagcgta
    21181 tcgtgggcgg cacggtgact cagttcagac tcgttcagta ccatcccggc aaagaacgca
    21241 ccgagtgcaa aggagacatc aaacagctct accgcaccaa aggcaatccc taacgccagc
    21301 gccagcaccg acagggtaaa cagctcgcga gaaccggttg ccgcgctgcg tgccataatc
    21361 cacggcacca gacggcgacc taccagcatc ataatggcga taaatgcgat cactttgccg
    21421 atggtgatcc ccatatcgac tgcaagagtg gcaaagccca catcgccctg ttccatcatt
    21481 cctgccactg cgggcagcaa caccagcgtc agaaccatta ccaggtcttc cacaatcaac
    21541 caaccgatgg cgatttgccc acgctgactg tcaattaatt gccgttcttc aagtgcgcgc
    21601 agtaacacca cggtactggc ggtggaaaga cataaaccga acacgatacc ggtcattaac
    21661 gaccagccca gcacggcaga gagcgccata cccagcagcg tcgccacggc tatctgggcg
    21721 atcgcaccgg gaatggcgat ggcctttacc gccatcaaat ccttcagcga aaaatgcaaa
    21781 ccgacgccga acatcagcaa aataacgccc agttcagcca gttccggcgc aagcttggta
    21841 tcggcaacaa agcccggagt gaatggtcct gccagcacac ccgctaacag atatcccacc
    21901 agaggagaaa tacgtagttt attggccagc atgccgagga taaaggcgag cacaaggccg
    21961 ccaacaatgg tggtgataag cggggtggcg tgatgcattc cgtctccttt tcctggtggt
    22021 tattgtccat ttttggccgg ggaaaccaaa attacaggta atagtttatg acaatttcat
    22081 tgatgatgtt catgaataat tattgaattt tgcagaaaaa tggaattagc tgcaaaaaaa
    22141 gcacggatcg gaaaacagaa ggcggtttaa cagaggaaag gcttatggcg actgtaaaac
    22201 gatgcagcca aagtttgcct ttggctgcaa tgaaatcagt ctttatgccg gttatcaggc
    22261 aggaatatgg tcaacatccc caatagtggc aggaaagcac agattttata gactaactcg
    22321 atactggtgt gatcggcgat aagccccaga actgccgctc ccagacctcc cataccaaaa
    22381 gcaaaaccga aaaagagtcc agaaaccata ccgatacgtc ccggaagcag ctcctgagcg
    22441 taaaccagaa tggcagagaa tgccgaagcg aggataaatc caataatcac cgttaaaacc
    22501 cccgtccagt gcaggctggc gtagggtaaa atcagcgtaa acggcgcaac gccgaggata
    22561 gagccccaaa tcacatattt ccgcccaatt ttatccccta caggcccgcc gatcaccgta
    22621 cctgccgcaa cggcaaacag gaaggcaaac agatgaagct gagcattctg gatagataat
    22681 ccgaattttt gcatcagata aaaggtgtaa tagctgctga tgctcgccat atagaaatat
    22741 ttcgagaaaa tgaggattaa cagaatgctg accgccagta ccactttgtt gcgcggcagt
    22801 ggattgataa tcgtcgcttt gggttttcct ttattcattc ggtgctgtgc cgagtaccaa
    22861 cggctgattt gcgccaacac cacgatcgcc agcagtgccg caagcacaaa ccaggcaacg
    22921 ttgcctttgc cataaggcgc gataatcacc gccgccagca agggtcccag ggaactgcca
    22981 aagttgccgc cgacctgaaa gatagattgc gccaggccat gccgcccgcc ggaagccata
    23041 cgggctacgc gagaagattc cggatgaaag accgatgaac cggtaccgac cagcgccgcc
    23101 gccagcagaa ctgcgccaaa actgcccgcc agcgcaagca gcaccagacc acttaaggta
    23161 aagcacatgc caattggcaa cgaccacggc atcggatatt tatcggtcca gtagccgacc
    23221 actggttgca gtagcgaaga ggcgagctgg aaggtgaggg ttatcatgcc aatctgcata
    23281 aatgtcagag aaaattctga ctgaagcagc ggataaatcg ccagaatcag cgattggatc
    23341 atgtcgttca gcagatgtga gaggctgata gcacctaaaa taccaaacga tgttcgggcc
    23401 ttggtcgttg acgcagccgc gcccgccaca ggctggggtt gttcactcat tgccatagga
    23461 aagtcacttt ttcagggttg cgatgtaaag aatgatctta tttgtgatta ttacccgact
    23521 aacatacctg tatgcgtcgc ctgaaggaag tctcaacgcc gaatacagaa tttctaatct
    23581 ggatgcagat ttatcttcac cggacgcaga cttgtctatg atgtcgcgtc atactatttt
    23641 tcaacacgtt gaaatcaggt cagggagaga agtatgaaat tattgcagcg gggcgtggcg
    23701 ttagcgctgt taaccacatt tacaccggcg agtgaaactg ctctggcgta tgagcaggat
    23761 aaaacctaca aaattacagt tctgcatacc aatgatcatc atgggcattt ttggcgcaat
    23821 gaatatggcg aatatggtct ggcggcgcaa aaaacgctgg tggatggtat ccgcaaagag
    23881 gttgcggctg aaggcggtag cgtgctgcta ctttccggtg gcgacattaa cactggcgtg
    23941 cccgagtctg acttacagga tgccgaacct gattttcgcg gtatgaatct ggtgggctat
    24001 gacgcgatgg cgatcggtaa tcatgaattt gataatccgc tcaccgtatt acgccagcag
    24061 gaaaagtggg ccaagttccc gttgctttcc gcgaatatct accagaaaag tactggcgag
    24121 cgcctgttta aaccgtgggc gctgtttaag cgtcaggatc tgaaaattgc cgtcattggg
    24181 ctgacaaccg atgacacagc aaaaattggt aacccggaat acttcactga tgtcgaattt
    24241 cgtaagcccg ccgatgaagc gaagctggtg attcaggagc tgcaacagac agaaaagcca
    24301 gacattatta tcgcggcgac ccatatgggg cattacgata atggtgagca cggctctaac
    24361 gcaccgggcg atgtggagat ggcacgcgcg ctgcctgccg gatcgctggc gatgatcgtc
    24421 ggtggtcact cgcaagatcc ggtctgcatg gcggcagaaa acaaaaaaca ggtcgattac
    24481 gtgccgggta cgccatgcaa gccagatcaa caaaacggca tctggattgt gcaggcgcat
    24541 gagtggggca aatacgtggg acgggctgat tttgagtttc gtaatggcga aatgaaaatg
    24601 gttaactacc agctgattcc ggtgaacctg aagaagaaag tgacctggga agacgggaaa
    24661 agcgagcgcg tgctttacac tcctgaaatc gctgaaaacc agcaaatgat ctcgctgtta
    24721 tcaccgttcc agaacaaagg caaagcgcag ctggaagtga aaataggcga aaccaatggt
    24781 cgtctggaag gcgatcgtga caaagtgcgt tttgtacaga ccaatatggg gcggttgatt
    24841 ctggcagccc aaatggatcg cactggtgcc gactttgcgg tgatgagcgg aggcggaatt
    24901 cgtgattcta tcgaagcagg cgatatcagc tataaaaacg tgctgaaagt gcagccattc
    24961 ggcaatgtgg tggtgtatgc cgacatgacc ggtaaagagg tgattgatta cctgaccgcc
    25021 gtcgcgcaga tgaagccaga ttcaggtgcc tacccgcaat ttgccaacgt tagctttgtg
    25081 gcgaaagacg gcaaactgaa cgaccttaaa atcaaaggcg aaccggtcga tccggcgaaa
    25141 acttaccgta tggcgacatt aaacttcaat gccaccggcg gtgatggata tccgcgcctt
    25201 gataacaaac cgggctatgt gaataccggc tttattgatg ccgaagtgct gaaagcgtat
    25261 atccagaaaa gctcgccgct ggatgtgagt gtttatgaac cgaaaggtga ggtgagctgg
    25321 cagtaatccg aaagtgccgg atgtttgcat ccggcacaat gcttaatcgc ggcgggcgat
    25381 atcagcaaat ttggcatcga ggatctttgc cagatcgcct gccgccagtt cgatatccag
    25441 tccgcgcttg ccgccggaaa cataaatagt ggcaaattct tgtgcggggg cgtcgataat
    25501 cgttggcaga cgttttttct gccccagtgg gctaatcccc ccaaccaggt atcccgtcga
    25561 acgctgcgcg accatcggat cggccatctc aactttcttg gcacccagcg cttttgctac
    25621 ttttttaaga tccagttgac ctgcgaccgg cgtaacggcc acggcaaggt gtttcatatc
    25681 accgttcact gccaccagca gcgttttgta gacctgatcc ggattcaaac ctaatttttt
    25741 gacgacttca tcgccaaaat tgatttcagc cggatcgtgc tcgtaggtat ggatttgaaa
    25801 cgaaatcttg tttttttcga gtaatttaac tgcgggtgtc atggtaattt tcctgcctta
    25861 aacaaaaaaa cgaagcaagc atacgcctga tggcggtcca aaaaaaagag tcatcttgcc
    25921 taagagtatt ggcaggatgg tgagattgag cgacaatcga gttacaccgt cgcttaaagt
    25981 gacggcataa taataaaaaa atgaaattcc tctttgacgg gccaatagcg atattggcca
    26041 tttttttagc gcaacatttg cggcaaattc ccttctccat acaggtgtag tgcaccgacc
    26101 gcgaccacat atcgccccgg cggcatggcg cgtaatttat cccgccaggc gagatttcgc
    26161 tgatgcatca gcacatcgta cagcgactga ctgaacgtat tgggcagcgt tatatcatta
    26221 ttttgcggcg gtgcattcag ccaccagctc atcatttgtt gcagcaaccg tgcgttggta
    26281 tgccagtggg tcagcgtatc gtccagcagc gccagtcctt tgtcagggag ctggagcaac
    26341 atggtaatct ggttttcagc cccttccagt tcaatcacgg gtttatgttg ttgcttcgcc
    26401 gcctgcaata actggtaatc gataccgtat tctgcccgca gccccagttt ttgtgcctgc
    26461 gtcgcctgaa gaaccatcgc gatttgccac agcggttgag tagaaaagag cgacggagaa
    26521 atgcccatct cctggctaat gtgctgcaga ttttggagtt gctcctcgtt aatgcgctct
    26581 tccagcgcct cgcaagtagg cacattagca aaaggcgtat cgctggtgga aacatccgcc
    26641 tcgacgatca gcgcatcggc gtttttgagc tttttgagca aacgggtggg caggggagcc
    26701 atatcgtggc tacccatatg aatactgcca atcagatgaa aatggcgatt gccgggaagg
    26761 gtgatatcga tggcaggcca ggtgtaatga ttaccgcgca gcgcggccca aagcgttttt
    26821 acccggtaca acagatccat acgacctccc tttgtgaaat atcatgctag cgcgcggtga
    26881 gggatggcgc aaatggagtt ggggacttgt ttaatgtgtt tgtatgattc agtatgttct
    26941 tgcatcgcta ttcacaggga agcaacagtt aaaaaccatg aaacaggcaa caagaaaacc
    27001 gacgacaccc ggagatattc ttctctatga atatctggaa ccgctcgatt tgaaaatcaa
    27061 tgagttagca gagttgctgc atgttcatcg taatagcgtc agtgcactga tcaataacaa
    27121 tcgtaaactc accactgaga tggcattccg tctggcgaaa gtttttgata ccacagtcga
    27181 ttttaggcta aacctccagg cggcagttga tctttgggaa gttgaaaaca acatgcgcac
    27241 ccaggaagaa ttgggacgga ttgaaacagt ggctgaatat ttggcacgcc gtgaagagcg
    27301 tgcaaaaaag gtcgcgtaag gccaaaacat cgcttcatct cgtaggccgg ataaggcgtt
    27361 tacgccgcat ccggcagtca tgcgtcgatg ccaaatgcgc cgccctaaag cagcgcatcc
    27421 gcaatgacgt acttattcct tcggtttaaa ccgcagcaac cggttggcgt tactcactac
    27481 ggtaatcgac gagagcgcca ttgccgctcc ggcaactacc gggttaagca gtgttccagt
    27541 aaacggccac aaaataccgg cggcgaccgg aataccgatg ctgttgtaga taaaggcacc
    27601 gagcaggttc tgcttcatgt tgcgcagcgt tgcgcgggaa atcgcgagcg catccgcaac
    27661 gcccatcagg ctatggcgca tcagggtaat cgccgcggtt tcaatggcaa catcactgcc
    27721 gccacccatc gcaatgccga catccgcctg ggccagcgct ggcgcgtcgt taatgccgtc
    27781 gcccaccatt gccacctgac gtccttcact ttgcagacgt ttgatcgctt cggctttacc
    27841 gtccggcagc actccggcaa tcacttcatc aattccagct tctttggcga tcgcattggc
    27901 ggtggttggg ttatccccgg tcaacatcac cagacgatat cccgctttat gcaggcgttg
    27961 cagcgccgcc acgctatcac tacgcaacgg atcgcgtaca gccagcaggg ctactgcttt
    28021 cccgtcaatc gccagcagca caggcgttgc tccttgcgat gcctgagcag taatctccgc
    28081 ttcgatagct ttggtaccaa cctgttgctc atttaacagc gcctgattgc ccagcaataa
    28141 cgcatgacct tcagcttcac cgctcacgcc cagcccgcgc aatgtgcgga aaccgttgac
    28201 ctgcggcagc tgcatatcac ctgctttatc gaggatcgcc cgtgccagcg gatggctgga
    28261 accttgctcc agtgccgccg ccagacgcaa tgcctgcgct tcatcaacat cagcaaacgt
    28321 tttcactgcg acaacctgcg gcttcccttc ggtcagcgtc ccggttttat cgaacacgac
    28381 ggtatcgagt gtactggcgc gttgcagcgc gtcggcgtcc cgcaccagca cgccaaactc
    28441 agccgcccgc ccgacgccgg aaataatcga catcggcgtc gccagcccca gcgcacacgg
    28501 acaggcgata atcagtaccg tggtggcaat cactagggta taaacaattt gcggtgccgg
    28561 accaaagaag taccagattg ccgcactgac cagcgcaatc accaccacca caggtacaaa
    28621 tacggctgag attttatccg ccagctgacc gatttctggc ttgctgctct gggcctggcg
    28681 caccatgcga atgatccgtg acagcgtggt atggctgcca accgcactgg cacgaaacag
    28741 cacactgccg tcctgtacca ctgtcccggc atggacgctt tcgccttcgc ctttttgctg
    28801 tgggattggt tcgcccgtca gcatcgcttc atccagccat gcttcgccct gggtaatctc
    28861 gccatctacc ggcacgcgat cgccggtcgt caggcgcagc aacatacctg gctgcacttc
    28921 cgccagaggc acgctttttt caccttcgtc agtaaccagg cgcgccgtcg gtggggttaa
    28981 atcgagtaat ttctccagcg ccttagaaga acgctgacgt gcgcgcgctt ccagcatatg
    29041 gccgagatta atcagaccga taatcatcgc actggcttca tagtaaagat gccgcgcttc
    29101 catcgggaac cactgcggcc acaggttgac gctcatcgaa tagagccacg ccacacccgt
    29161 tcccagcgcc accagcgtat ccatcgtcgc tgcaccgttc agcaggcttt tccatgcact
    29221 gcggtaaaaa tggccgccgg cgaaaaccat cactgccagg gttatcaggc cgataactaa
    29281 ccacaagctg cggttgtcag cggtgaccat catgttatcg ccgatcatcc cccagaccat
    29341 taccgggata cccacagcca gtgcaacaat tgcctgccag cggaagcgct tcatcgtagc
    29401 tacggcggtt tcttgctggc gctcgcggcg tttagcgtca tcttcaatcg cttccgcacc
    29461 gtagcccgct ttttccaccg cctgcactaa atcttgtggg gaggcactgc ccatcaccag
    29521 cgcagtacgc tccgccaggt ttacccgtgc ctgagtgacg cccggtacgc tttgcagcgc
    29581 attttgtacg cgggtgacac agctggcgca gctcatgccg ctcagcagca actgctggct
    29641 gtcatcgtca tcggcggtcg ctgccggaag cgcctcagaa accgctgtca gtgcttccga
    29701 cgggattgat gactccgcca gcggtttagc ctttgggtgg cttacagatg cgtcataacc
    29761 cgcttgtttg atggtttcga tcagctgttc tgcactggca gtcccggtaa cgtgcgcttc
    29821 agtgatagac acatccgctt gttccacatc cgggcgctgt tcgagacttt ctttcacgcg
    29881 tttaacgcag tgaccgcagg acaggccgtc cagggtcagg tcgataattt gtgacataaa
    29941 acactccttt aagacagttt tgactggctg tgataaaggt taaaccttcc agcaagggga
    30001 aggtcaagaa attaataaac caggcgagta aaagtccgta aagattaaaa aattggctca
    30061 atttgcatca ggattagaca tttatctctt tgttttcctg tagttaagtt gcgggtgcta
    30121 agttaaatca ggatgcctca aaatcggcac cggggtgagg aattacctcc cgcatctata
    30181 aaaaggagtt aacaaaagat gttagatgca aacaaattac agcaggcagt ggatcaggct
    30241 tacacccaat ttcactcact taacggcggt caaaatgccg actacattcc ctttctggcg
    30301 aatgtgcctg gtcaactggc ggcagtggct atcgtgacct gcgatggcaa ggtctatagt
    30361 gcgggtgaca gtgattaccg ctttgcgctg gaatccatct cgaaagtctg tacgttagcc
    30421 cttgcgttag aggatgtcgg cccgcaggcg gtacaggaca aaattggcgc tgacccgacc
    30481 ggattgccct ttaactcagt tatcgcctta gagttgcatg gcggcaaacc gctttcgcca
    30541 ctggtaaatg ctggcgccat tgccaccacc agcctgatta acgctgaaaa tgttgaacaa
    30601 cgctggcagc gaattttaca tatccaacag caactggctg gtgagcaggt agcgctctct
    30661 gacgaagtca accagtcgga acaaacaacc aacttccata accgggccat tgcctggctg
    30721 ctgtactccg ccggatatct ctattgtgat gcaatggaag cctgtgacgt gtacacccgt
    30781 cagtgctcca cgctcctcaa tactgttgaa ctggcaacac ttggcgcgac gctggcggcg
    30841 gggggtgtga atccgctgac gcatgaacgc gttcttcagg ccgacaacgt gccgtacatt
    30901 ctggccgaaa tgatgatgga agggctgtat ggtcgctccg gtgactgggc gtatcgcgtt
    30961 ggtttaccgg gcaaaagcgg tgtaggtggc ggtattctgg cggtcgtccc tggcgtgatg
    31021 ggaattgccg cgttctcacc accgctggac gaagaaggca acagtgttcg cggtcaaaaa
    31081 atggtggcat cggtcgctaa gcaactcggc tataacgtgt ttaagggctg atcatgatga
    31141 acacggaagg taataacggt aacaaacctc tcggtctatg gaacgtcgtt tccatcggca
    31201 ttggggcaat ggtgggggcg gggatcttcg cgctgctggg gcaggctgca ttgctaatgg
    31261 aagcctcgac ctgggtcgcc tttgcttttg gcggtattgt ggcgatgttt tccggttatg
    31321 cctatgcgcg tctgggggcg agctatccca gcaatggcgg cattatcgac ttctttcgtc
    31381 gcggattagg caacggcgtc ttttcgctgg cgctctcgtt actgtacctg ttgacgctgg
    31441 cggtgagcat cgccatggtc gcccgtgctt ttggcgctta tgccgtgcag tttttgcatg
    31501 aaggcagcca ggaggagcac cttattttgc tctacgcgtt ggggatcatt gcggtgatga
    31561 cgcttttcaa ctccttaagc aaccatgcgg tagggcggct ggaagtgatc ctcgtcggca
    31621 ttaaaatgat gatcctgtta ttgctgatta ttgccggtgt ctggtcgctg caaccagcgc
    31681 atatttccgt ctctgcgccc cccagctccg gtgcgttctt ctcctgtatt gggataactt
    31741 tccttgccta tgcgggcttt ggcatgatgg cgaacgcggc ggataaagtg aaagatccgc
    31801 aggtcattat gccacgggcg tttctggtgg cgattggcgt taccacgttg ctttatatct
    31861 cgctggcact ggttttgctt agcgatgtat cggcattaga gttagaaaaa tatgccgata
    31921 ccgccgtagc gcaggctgct tctccgctgc tcggacatgt gggttatgtg atcgtcgtca
    31981 tcggcgcttt actggcgacg gcttcagcca ttaacgcgaa cctgttcgcc gtgtttaaca
    32041 tcatggacaa catgggcagc gaacgcgaac tgccgaagct aatgaataaa tccctgtggc
    32101 ggcagagtac ctggggcaac atcattgtcg tggtgttgat tatgctgatg acggcggcac
    32161 tgaatttagg ctcactcgcc agcgttgcca gcgccacctt tttgatttgc tacctggcgg
    32221 tgtttgtggt ggcgatccgc ctgcgtcatg atattcacgc ctcgttgccg attcttatcg
    32281 ttggtacgtt ggtgatgttg ttggtgatcg ttggctttat ctacagtctg tggtcccagg
    32341 gtagccgtgc gttgatatgg attattggct cactcttact cagccttatt gtggcaatgg
    32401 tcatgaagcg caataaaacc gtataacatc tctctgtgcg cagtacttcc tgtattattg
    32461 tggtggcggt cgatattcgc actggcaaaa aaacgtgctt gaatatctgt tgaaaccctt
    32521 taacaaagca caggaggcgt tgcgcgaacg atgaacatca gcgatgtagc aaaaattacc
    32581 ggcctgacta gcaaagccat tcgcttctat gaagagaagg ggctggtgac gccgccgatg
    32641 cgcagcgaaa acggttatcg cacctacacg cagcagcatc tcaacgaact gaccttactg
    32701 cgccaggcac ggcaggtggg ctttaacctg gaagagagcg gcgagctggt gaatctgttt
    32761 aacgacccgc agcggcacag cgccgacgtc aaacggcgca cgctggagaa ggtggcggag
    32821 atcgaacgac acattgagga gctgcaatcc atgcgcgacc agctgctggc actggcgaat
    32881 gcctgccctg gcgatgacag cgccgactgc ccgattatcg aaaatctctc cggctgctgt
    32941 catcatcggg cagggtgatt aagacgagac ggctcggata tgtagggtta tcccttctat
    33001 cgcaatgact tcaacatgcg tacctgcacc gagatcctcg ctggcgctga caggccatga
    33061 actgtcaccg acgcgcatat gaccgcgccc gttgaccagc ggagattcca gcacaaaacg
    33121 tcggccaatc agctgctgcc cgcgctggtt taaatgacta tcgctgtgct tttgttcgcg
    33181 cacccgccgc gacaaccatt tccaccacag ccaggcggcg agcagcgtca ggatggcaaa
    33241 cattacccct tgccactccc aacccagcgg caccagccag accaccaggc cggtaatcac
    33301 cgctgccacg ccgctccaca acaaataacc atttccgccc agcatctcgg ctgccagcag
    33361 caaaccgccg agactgagcc agaaaatatg tggatgaacg accattaact ccatcatggc
    33421 tgagtccgtt tgttggcgct gtctttcacc agctcggcaa tcccggcaat cgaccccatc
    33481 aggctgctgg cctctaatgg catcatcact actttgctgt tactggagga accgatctgc
    33541 tgtaacgctt cggtgtattt ctgcgctacg aagtagttca ccgcctgaat atcaccggag
    33601 gcgatagctt cagacaccat tttggtggcg cgggcttctg cttcggcgga acgttcacgc
    33661 gcttcagcct gtaaaaacgc cgactgacgt tcgccttccg ctttcaggat ttgcgactgt
    33721 ttttcacctt cggctttgag gatttccgcc tgacggatcc cttccgcttc aagaatgtaa
    33781 gcgcgtttgg tacgttccgc tttcatctgc gcgttcattg aagagataag ctctgccggt
    33841 gggcgcacgt cgcgaatttc aatacgggtg actttaatcc cccacgggtt ggtggcttca
    33901 tcgacaatac gcagcaggcg tgagttgatg ctgtcgcgct gagagagcat ttcgtcaagt
    33961 tccattgaac ccaacacggt acggatgtta gtcatggtca ggttgatgat cgccagctcc
    34021 agattgctga cttcataagc cgcgcgcggc gcgtcaatca cctgaataaa acagactgcg
    34081 tcgatggtaa cgttggcgtt atctttcgag ataacttcct gggaagggat atcgagcact
    34141 tgctccatca tattgatctt gcgaccaatg cgatccataa acggcaccac cagactgagc
    34201 cccggctgta acgttttggt atagcgacca aaacgttcta ccgtccattg atagccctgc
    34261 ggcacgattt tgacgcccgc gccgacaatg accagcgcga caaaaatgag aatcgggata
    34321 aagataagca tcggaaaaac ctcctgttgt accgtccata atcagcaaaa ttgctgcttg
    34381 attaaacaaa ttatacctga ttactgaaag agagttcccc cttattcctg cgaaggataa
    34441 actgttttta gtaaaaatca gaaaaaggga acagtgatgc aggaaaatag tcctttgctt
    34501 cagctacaaa acgtaggata tctggcgggt gatgcgaaga ttcttaataa catcaatttt
    34561 tcgctgcgtg ctggcgaatt taagttaatt accggtcctt ccggttgtgg caaaagtacg
    34621 ctgctaaaaa tagttgcttc attgatcagc ccaaccagcg gaacgttact gtttgaaggt
    34681 gaggatgtca gcacactaaa gccagaaatc taccgccagc aagtctctta ctgcgcccag
    34741 acgccgacgc tgtttggcga tacggtatac gataatctga tctttccctg gcagatccgt
    34801 aaccagcagc ctgacccggc catttttctc gattttctcg aacgcttcgc tttgccggac
    34861 agcattttga cgaaaaatat cgccgagcta tctggtggtg aaaaacaacg catctcactg
    34921 attcgtaacc tgcaatttat gccgaaggtt ttattgctgg atgaaatcac cagtgcgctg
    34981 gatgaaagta ataaacataa cgttaatgag atgatccatc gttatgtgcg cgagcaaaat
    35041 attgccgtgc tgtgggtgac acacgataaa gacgaaatta atcatgcgga taaagtgatt
    35101 acactgcaac cgcatgccgg agaaatgcag gaagcacgct atgaactcgc ataatattac
    35161 taacgaatca ttggcactgg cattaatgct ggtggtggtg gcaatcttaa ttagccataa
    35221 agaaaaactg gcgctggaga aagatatttt ctggagcgtc gggcgagcga taattcagct
    35281 gattattgtc ggctatgtgc tgaagtatat tttcagcgtg gatgatgcca gcctgacatt
    35341 attgatggtg ttatttatct gctttaatgc ggcgtggaac gcgcaaaaac gcagtaaata
    35401 tattgctaaa gcttttatct catcgtttat tgccattacg gtcggggcgg gaattaccct
    35461 ggcggtgctg attctctctg ggtcgattga atttatcccg atgcaggtga tccctatcgc
    35521 cgggatgatt gccggtaacg ccatggtagc ggtggggttg tgttacaaca atttagggca
    35581 acgggtcatt agcgaacagc aacagattca ggagaaactg agtcttggtg cgacgccgaa
    35641 gcaggcttca gcgatattga ttcgcgacag tattcgcgcg gctttaattc cgacggtcga
    35701 ttcagcaaaa acggttggct tagtgagttt accaggaatg atgtccgggc tgatatttgc
    35761 cgggattgat ccggtgaagg cgattaaata tcagattatg gtgaccttta tgctgctctc
    35821 aaccgccagc ttgtcgacca ttattgcctg ctatttaacc tatcgtaagt tttataattc
    35881 gcgccaccag ttggtggtga cgcaattgaa gaagaaatga tgcgatgccg gatgcgcagc
    35941 atcgcatccg gcgttgtggt tcatgtgccg atcaacggaa tatcaataca acaatgcata
    36001 cagctggcgg cgatacttcg acgccagtgc atcacccgta cccagcgcag cgaggatctc
    36061 ctggaacgtt ttacgcgtct gaccgtctgc ggcggtgaga tctttacgca gatgcccgaa
    36121 cagcaactcc agcgcctctt cattgcgccc aacctggtgc agttgcagag ccagttgcgt
    36181 cgccagtgcg gcatcttctg gattctccgc cacctgctgt tgcaactgtt gaatttccgg
    36241 cgtatcagcc gcctgcttca gcagttcgat ttgcgccacc agcccctggt agcgggtgtc
    36301 ctgatcctgc aacggaatgg ttttcagcac cgcttccgca tcttcagaac ggttcagcgc
    36361 aatcagcgtt tctgccagca gcaggccgat ctccccgttc tgattcgaca actgccaggc
    36421 gtctttcagc aatggcaggg catcggtgta attgccttcc tgcatcagtt gcatcgcctg
    36481 ctgcgctttc agctcttctt cgcgcggcag cactttatcc agcagggcgc ggatcgcctc
    36541 ttccggttgc ggcccctgga agccatctac cggttgcccg ttctggaaca gatacacggt
    36601 cggaatcgcg cgcagaccaa actgggcggc aatcatctgc tccgcgtcac agtccagctt
    36661 cgccagaata aattgcccgt tgtactgcgc cgcgaggctt tccaggatcg gggttaactg
    36721 caaacagtgc tggctacgtt cagaccaaaa atagaacagc accggagtgg tcatcgactg
    36781 ttcaagaacc tgttgcaggt tagattcgtt aatgttgaca atattttcta cggacatgga
    36841 gtcgctctct gttgtcgata ttttctttga catgggggct taagcgcgcg cttcaactca
    36901 cccctgcaat attttgtcca tcacgcgccc cggcagcagg cgcttgagca ccattactgc
    36961 ccaggtcacc agcgttaccg gatagcgcat cttcggcttc tcgctaataa aagcatggcg
    37021 tactttgtcc accaccgctt ccggtcccaa cgtaaagcgg gcggcgatgc cgggattttc
    37081 gactggttta tcactttgcg tctggttgac gttgtcggtg aagcgagtac gaatgggacc
    37141 gggttcgatc aggctgactt taattccgct gtggcgcagc tccatgcgca gtgcgtctga
    37201 ccacgcctcc agcgcatatt tactggccgc gtaagcgcca cgacccggcg tggagattaa
    37261 tcccatcacc gatgatgtca tcacaatacg cccttcaccg tgcggtaaca tcgcgggtaa
    37321 caggcgcatg gtgagctggt gtgcgccgaa aaagttggcg gaaaactgct gttccatctg
    37381 cgcacggctg atggtggaaa gggggccata catgccgaat ccggcattgt taaagatccc
    37441 atacagacaa ttatcggtca gggcgatcac ctcgtctgct gcgcgatcaa cactttctgg
    37501 tgaatccaga tcgatcaaca cgccggtaaa tcccatgttg ttcatacgct caacatcatc
    37561 cggttttcgg caacctgcca gcacatgaaa accctggcgt tttaattcga gcgcgctttc
    37621 caggccaatt ccactggaac atccggtaat taagaccgat ttttgcataa ctttacctgt
    37681 caggatctcc gttgctttat gagtcatgat ttactaaagg ctgcaactgc ttcgccatcc
    37741 agtcggcaat aaacggctgg gcgtcgcggt tgggatgaat accgtcatcc tgcatccatt
    37801 gtggcttgag gtagacctct tccataaaaa agggcagcag cggaacatca aactctttgg
    37861 cgagtttggg gtaaatggcg ctaaaggctt cattataacg gcgaccatag tttgcaggca
    37921 gacgtatttg cattaacaat ggttcagcgt tggcggcttt gacatcctgc aaaatctggc
    37981 gcagcgtttg ctcggtttgc tgtggctgaa aaccacgcaa accgtcattg ccgcccagtt
    38041 caaccagcac ccaacgcggc tgatgctgtt tcagcagagc cggaaggcgc gccagtcctt
    38101 gttgcgaggt gtcgccgctg atgctggcat taactaccga cgttttactc tgccacttat
    38161 cattcaacaa ggcaggccag gccgcgctgg cagacattcg atacccggcg ctcaggctat
    38221 cacccagaat caataacgtg tccgctgcgg cggcacggaa ggttaacagg accaggaaca
    38281 ggaagggcaa atgccagcgg aaaacattgt tgaagttcat catcttaaga agtccgtcgg
    38341 tcagggggag catgaactct ccatcctcac cggagttgag ctggttgtca aacgtggcga
    38401 gaccatcgca ctggtgggcg agtcgggatc gggtaagtca accttgctgg cgatcctcgc
    38461 cgggctggat gacggcagca gtggcgaagt gagtctggtg ggacaaccgc tacataatat
    38521 ggacgaagaa gcgcgggcaa agttgcgcgc gaagcacgtc ggctttgttt ttcagtcatt
    38581 tatgttaatt cctaccctta acgcgctgga aaacgtcgag cttccggcgc tgctgcgcgg
    38641 tgagagtagc gcggaaagtc gtaacggagc gaaagcgttg ctcgaacagt tagggctggg
    38701 taaacgtctt gatcatcttc cggcacagct ttccggcggc gaacagcaac gagtggcgct
    38761 ggcgcgagcc tttaatggtc gacctgatgt gctgtttgcc gacgaaccca ccggcaacct
    38821 tgaccgccag acgggcgata aaattgccga cctgctgttt tccctcaacc gtgagcatgg
    38881 caccacgttg attatggtga cccacgacct gcaactggcg gcacgctgcg accgctgctt
    38941 acggctggtg aacgggcagt tgcaggagga agcatgattg cacgctggtt ctggcgcgaa
    39001 tggcgctcgc cttcgctatt gattgtctgg ctggcgttaa gcctggcggt ggcctgcgtg
    39061 ctggcgctgg gtaatatcag cgatcgcatg gaaaaaggct taagccagca aagccgtgaa
    39121 tttatggcgg gcgatcgggc gttgcgcagt tcgcgcgaag tgccgcaagc gtggctggag
    39181 gaagcgcaaa agcgcggcct gaaagtcggc aagcagctga ctttcgccac catgacattt
    39241 gcaggcgaca caccgcagct ggcgaacgtt aaagcggtgg atgatatcta cccgatgtat
    39301 ggcgatctgc aaaccaatcc ccctggcctg aaaccgcagg cgggcagcgt attgctggcc
    39361 ccacgcctga tggcactgct taacctgaaa acgggcgaca ccattgacgt gggcgatgcc
    39421 accttgcgga ttgccggaga agtgattcag gaaccggatt ccggttttaa ccccttccag
    39481 atggctccgc gtctgatgat gaatctggcg gatgtcgata aaaccggagc cgtgcagccg
    39541 gggagtcggg tcacctggcg ctataaattc ggcggcagtg agaaccagct cgacagctat
    39601 gagaaatggt tgttacctca gcttaaaccc gaacaacgct ggtacggtct ggaacaggac
    39661 gaaggcgcgc tggggcgatc gatggaacgc tcgcaacagt tcctgctgct ttcggcgctt
    39721 ctgaccttgc tgctggcagt ggcagcagtg gcggtagcga tgaatcatta ctgtcgcagt
    39781 cgctacgatc tggtggcgat cctcaaaacg ctgggggcag ggcgagcgca actgcgtaag
    39841 ctaatcgtcg gtcagtggtt gatggtgctg acgctttcag ccgttaccgg tggggcgata
    39901 ggcctgttgt tcgaaaacgt gttgatggtg ctgctcaagc ccgttctgcc tgctgcacta
    39961 ccgccagcca gcctctggcc gtggctatgg gcgctgggca ccatgacggt catctcgctg
    40021 ctggtggggc tacgaccata ccgcttgttg ctggcaacgc agcctttacg cgtattacgt
    40081 aatgatgtgg tagcgaacgt ctggccgctg aagttttatc tgccgattgt cagtgtagtg
    40141 gttgtgctgc tgctcgccgg attaatgggg ggcagtatgc tgctctgggc ggtgctggcg
    40201 ggcgcggtag tactggcttt gctgtgcggt gtgctgggct ggatgctgct gaatgtactt
    40261 cgccgcatga cgctgaaatc gctgcctctg cgcctggcgg tcagccgcct gttacgtcag
    40321 ccgtggtcaa cgttaagcca gctttcggca ttttcgctct cctttatgct gctggcactg
    40381 ctgctggtgt tgcgtggtga tctgctcgac cgctggcagc agcagctacc tccagaaagc
    40441 ccgaactact ttttaattaa catcgccaca gaacaggtag caccgctaaa agcgttcctc
    40501 gcggaacatc agatagtccc ggaatcgttt tatccggtgg tgcgggcgcg gctgacggcg
    40561 attaacgata agccgacaga aggtaatgaa gatgaggcgc ttaaccgcga actcaatctt
    40621 acctggcaaa atacgcggcc cgatcataat ccgattgtcg ccggtaactg gccgccaaaa
    40681 gccgatgaag tgtcgatgga agaggggctg gcgaaacgct taaaggttgc cctcggtgat
    40741 accgtgactt ttatgggcga tacccaggag ttccgcgcta aagtgaccag cctgcgcaaa
    40801 gtggactggg aaagtctgcg gcctaatttc tattttattt tcccggaagg ggcattagac
    40861 gggcaaccgc agagctggct taccagtttc cgctgggaga atggcaacgg catgttgacg
    40921 caactcaacc gccagttccc gaccattagc ctgttagaca ttggcgcgat tttaaaacag
    40981 gtcggtcagg tgctggagca ggtaagtcgg gcgctggagg tgatggtggt gctggtcacc
    41041 gcctgcggta tgttgctgtt gctggcacag gtgcaggtgg gtatgcgtca gcgccaccag
    41101 gagctggtgg tgtggcgcac actcggtgcg gggaaaaaac tgctgcgtac cacgttgtgg
    41161 tgtgagttcg ccatgcttgg gtttgtttcc ggcctggtgg ccgcaattgg tgcggaaacg
    41221 gcgctggcag tgttgcaggc gaaagtgttt gattttccgt gggagccaga ctggcgattg
    41281 tggattgttc tgccgtgcag cggagcgctg ctgctgtcgc ttttcggcgg ctggctgggt
    41341 gcgcgactgg ttaagggtaa ggcgctgttc aggcagtttg cggggtgatg agagtaaata
    41401 aggggcgttc tggttgaatg gaacgccttg tttaaattaa ttctacaata tgtttcattg
    41461 atgat
//
LOCUS       DAPGWB010000021        40420 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.021, whole genome shotgun sequence.
ACCESSION   DAPGWB010000021 DAPGWB010000000
VERSION     DAPGWB010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 40420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40420
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.021"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            303..389
                     /gene="leuL"
                     /locus_tag="RHX79_001144"
     CDS             303..389
                     /gene="leuL"
                     /locus_tag="RHX79_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leu operon leader peptide"
                     /protein_id="HDV2196340.1"
                     /translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH"
     gene            482..2053
                     /gene="leuA"
                     /locus_tag="RHX79_001145"
     CDS             482..2053
                     /gene="leuA"
                     /locus_tag="RHX79_001145"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDV2196341.1"
                     /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME
                     VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT
                     SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN
                     AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV
                     HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI
                     CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR
                     AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR
                     LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITDYNVELVKYS
                     LTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE
                     LQRKAQHNENNKETV"
     gene            2053..3144
                     /gene="leuB"
                     /locus_tag="RHX79_001146"
     CDS             2053..3144
                     /gene="leuB"
                     /locus_tag="RHX79_001146"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDV2196342.1"
                     /translation="MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYD
                     VGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHF
                     KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK
                     AFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPD
                     VELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG
                     FGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGI
                     RTGDLARGAAAVSTDEMGDIIARYVAEGV"
     gene            3147..4547
                     /gene="leuC"
                     /locus_tag="RHX79_001147"
     CDS             3147..4547
                     /gene="leuC"
                     /locus_tag="RHX79_001147"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDV2196343.1"
                     /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL
                     RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH
                     PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ
                     GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT
                     LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV
                     VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL
                     TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLD
                     KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA
                     AAAAVTGHFADIRNIK"
     gene            4558..5163
                     /gene="leuD"
                     /locus_tag="RHX79_001148"
     CDS             4558..5163
                     /gene="leuD"
                     /locus_tag="RHX79_001148"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDV2196344.1"
                     /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF
                     NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI
                     APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY
                     RFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN"
     gene            complement(5212..6390)
                     /gene="setA"
                     /locus_tag="RHX79_001149"
     CDS             complement(5212..6390)
                     /gene="setA"
                     /locus_tag="RHX79_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter SetA"
                     /protein_id="HDV2196345.1"
                     /translation="MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREV
                     GAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRH
                     YLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPL
                     AFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLPSVARVELPSENALSMQGGWQDSNVR
                     MLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLMGTAAGLEIPAMILAGYYVK
                     RYGKRRMMVIAVAAGVLFYTGLIFFHSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMP
                     GRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYWVIAVISVVALFLTAKVKDV
                     "
     gene            complement(6492..6623)
                     /gene="sgrT"
                     /locus_tag="RHX79_001150"
     CDS             complement(6492..6623)
                     /gene="sgrT"
                     /locus_tag="RHX79_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose uptake inhibitor SgrT"
                     /protein_id="HDV2196346.1"
                     /translation="MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEELMQWDDRNSES"
     gene            6712..8367
                     /gene="sgrR"
                     /locus_tag="RHX79_001151"
     CDS             6712..8367
                     /gene="sgrR"
                     /locus_tag="RHX79_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SgrR"
                     /protein_id="HDV2196347.1"
                     /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL
                     NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT
                     VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEE
                     NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIA
                     DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRN
                     TTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEG
                     CYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART
                     IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIES
                     DIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA
                     SKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP"
     regulatory      8401..8500
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            8531..9514
                     /gene="thiB"
                     /locus_tag="RHX79_001152"
     CDS             8531..9514
                     /gene="thiB"
                     /locus_tag="RHX79_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HDV2196348.1"
                     /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAF
                     EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA
                     ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT
                     STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS
                     PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP
                     TGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR"
     gene            9490..11100
                     /gene="thiP"
                     /locus_tag="RHX79_001153"
     CDS             9490..11100
                     /gene="thiP"
                     /locus_tag="RHX79_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease ThiP"
                     /protein_id="HDV2196349.1"
                     /translation="MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWV
                     AVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLIL
                     PVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ
                     ALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG
                     GGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQ
                     GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS
                     LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFL
                     LLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL
                     KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA
                     VTALILLLLCFLLFTVIEKLPGRNVKTD"
     gene            11084..11782
                     /gene="thiQ"
                     /locus_tag="RHX79_001154"
     CDS             11084..11782
                     /gene="thiQ"
                     /locus_tag="RHX79_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein
                     ThiQ"
                     /protein_id="HDV2196350.1"
                     /translation="MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL
                     IAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL
                     NAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL
                     DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTNELL
                     SGKASASALLGITG"
     gene            complement(11896..12660)
                     /locus_tag="RHX79_001155"
     CDS             complement(11896..12660)
                     /locus_tag="RHX79_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001148402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV2196351.1"
                     /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG
                     LGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE
                     HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI
                     LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL
                     WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGG"
     gene            complement(12746..13624)
                     /gene="araC"
                     /locus_tag="RHX79_001156"
     CDS             complement(12746..13624)
                     /gene="araC"
                     /locus_tag="RHX79_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HDV2196352.1"
                     /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG
                     YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRA
                     YWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLL
                     LRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQ
                     LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF
                     RAGCEEKVNDVAVKLS"
     gene            13963..15663
                     /gene="araB"
                     /locus_tag="RHX79_001157"
     CDS             13963..15663
                     /gene="araB"
                     /locus_tag="RHX79_001157"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HDV2196353.1"
                     /translation="MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCD
                     APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDTTGSTPAPIDADGNVL
                     ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI
                     LHVTRQDTAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP
                     PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH
                     MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG
                     QSAFGDIYAWFGRVLSWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLP
                     VVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGI
                     AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP
                     SAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL
                     "
     gene            15674..17176
                     /gene="araA"
                     /locus_tag="RHX79_001158"
     CDS             15674..17176
                     /gene="araA"
                     /locus_tag="RHX79_001158"
                     /EC_number="5.3.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
                     /protein_id="HDV2196354.1"
                     /translation="MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKL
                     PCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQ
                     FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERI
                     GSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV
                     NSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFT
                     TTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED
                     YTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAI
                     VASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHH
                     TVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR"
     gene            17345..18040
                     /gene="araD"
                     /locus_tag="RHX79_001159"
     CDS             17345..18040
                     /gene="araD"
                     /locus_tag="RHX79_001159"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HDV2196355.1"
                     /translation="MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS
                     GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHAT
                     IWAQSGQSIPAIGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA
                     AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKH
                     YLRKHGAKAYYGQ"
     gene            18115..20466
                     /gene="polB"
                     /locus_tag="RHX79_001160"
     CDS             18115..20466
                     /gene="polB"
                     /locus_tag="RHX79_001160"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II"
                     /protein_id="HDV2196356.1"
                     /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF
                     IPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT
                     VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT
                     RHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPD
                     VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID
                     GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK
                     DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG
                     EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
                     TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC
                     RFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIG
                     RVLVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG
                     DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARL
                     VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL
                     DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF"
     gene            20631..23537
                     /gene="rapA"
                     /locus_tag="RHX79_001161"
     CDS             20631..23537
                     /gene="rapA"
                     /locus_tag="RHX79_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001117023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HDV2196357.1"
                     /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA
                     RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL
                     DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN
                     IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
                     MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL
                     LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN
                     RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD
                     SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV
                     SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV
                     ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
                     SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
                     YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE
                     QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL
                     TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS
                     STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV
                     EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL
                     SAELSRLEALRAVNPNIRDDELTAIESNRQQIMESLDQAGWRLDALRLIVVTHQ"
     gene            23549..24208
                     /gene="rluA"
                     /locus_tag="RHX79_001162"
     CDS             23549..24208
                     /gene="rluA"
                     /locus_tag="RHX79_001162"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HDV2196358.1"
                     /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKD
                     SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG
                     HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR
                     SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD
                     F"
     gene            complement(24325..25140)
                     /gene="djlA"
                     /locus_tag="RHX79_001163"
     CDS             complement(24325..25140)
                     /gene="djlA"
                     /locus_tag="RHX79_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HDV2196359.1"
                     /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF
                     ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR
                     VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE
                     LGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDA
                     TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK"
     gene            25395..27749
                     /gene="lptD"
                     /locus_tag="RHX79_001164"
     CDS             25395..27749
                     /gene="lptD"
                     /locus_tag="RHX79_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HDV2196360.1"
                     /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ
                     GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR
                     TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN
                     RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL
                     PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF
                     RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKV
                     SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP
                     QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE
                     AKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVEGKMVFERDMEMLAPGYTQTL
                     EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI
                     YDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG
                     GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGI
                     SQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD
                     NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL"
     gene            27802..29088
                     /gene="surA"
                     /locus_tag="RHX79_001165"
     CDS             27802..29088
                     /gene="surA"
                     /locus_tag="RHX79_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SurA"
                     /protein_id="HDV2196361.1"
                     /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG
                     LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN
                     IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL
                     AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA
                     HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE
                     SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS
                     ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA
                     QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN"
     gene            29088..30077
                     /gene="pdxA"
                     /locus_tag="RHX79_001166"
     CDS             29088..30077
                     /gene="pdxA"
                     /locus_tag="RHX79_001166"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HDV2196362.1"
                     /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT
                     DRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLA
                     RACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRV
                     ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM
                     GTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ
                     GFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ"
     gene            30074..30895
                     /gene="rsmA"
                     /locus_tag="RHX79_001167"
     CDS             30074..30895
                     /gene="rsmA"
                     /locus_tag="RHX79_001167"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDV2196363.1"
                     /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI
                     GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE
                     KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL
                     SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAF
                     NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES"
     gene            30898..31275
                     /gene="apaG"
                     /locus_tag="RHX79_001168"
     CDS             30898..31275
                     /gene="apaG"
                     /locus_tag="RHX79_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HDV2196364.1"
                     /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ
                     LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI
                     DENGVPFSIDIPVFRLAVPTLIH"
     gene            31282..32124
                     /gene="apaH"
                     /locus_tag="RHX79_001169"
     CDS             31282..32124
                     /gene="apaH"
                     /locus_tag="RHX79_001169"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     ApaH"
                     /protein_id="HDV2196365.1"
                     /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG
                     SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL
                     RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP
                     NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA
                     EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGSLTCLRWEDKQYFVQPSNRHKDLGE
                     AAAS"
     gene            complement(32202..32681)
                     /gene="folA"
                     /locus_tag="RHX79_001170"
     CDS             complement(32202..32681)
                     /gene="folA"
                     /locus_tag="RHX79_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HDV2196366.1"
                     /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR
                     HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ
                     FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR"
     gene            complement(32873..34735)
                     /gene="kefC"
                     /locus_tag="RHX79_001171"
     CDS             complement(32873..34735)
                     /gene="kefC"
                     /locus_tag="RHX79_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefC"
                     /protein_id="HDV2196367.1"
                     /translation="MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW
                     GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLG
                     LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI
                     PLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV
                     FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF
                     FIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ
                     GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA
                     DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA
                     TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ
                     AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK
                     ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS"
     gene            complement(34728..35258)
                     /gene="kefF"
                     /locus_tag="RHX79_001172"
     CDS             complement(34728..35258)
                     /gene="kefF"
                     /locus_tag="RHX79_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     oxidoreductase KefF"
                     /protein_id="HDV2196368.1"
                     /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI
                     DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLW
                     AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA
                     RHYKQRLLEWQEAHHG"
     gene            complement(35366..36697)
                     /locus_tag="RHX79_001173"
     CDS             complement(35366..36697)
                     /locus_tag="RHX79_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196369.1"
                     /translation="MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQL
                     TPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMF
                     VSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADL
                     VGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFG
                     EPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLG
                     VGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALVVLGLIPDMGI
                     WLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPI
                     FINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG"
     gene            complement(36755..37042)
                     /gene="fixX"
                     /locus_tag="RHX79_001174"
     CDS             complement(36755..37042)
                     /gene="fixX"
                     /locus_tag="RHX79_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like protein FixX"
                     /protein_id="HDV2196370.1"
                     /translation="MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQVLELLVKACP
                     AGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG"
     gene            complement(37039..38325)
                     /locus_tag="RHX79_001175"
     CDS             complement(37039..38325)
                     /locus_tag="RHX79_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDV2196371.1"
                     /translation="MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKN
                     VTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRS
                     YSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILAD
                     GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD
                     GLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEY
                     SAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSA
                     MKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFT
                     IDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL"
     gene            complement(38376..39317)
                     /locus_tag="RHX79_001176"
     CDS             complement(38376..39317)
                     /locus_tag="RHX79_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HDV2196372.1"
                     /translation="MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGVQA
                     IQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYR
                     LKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDAS
                     RTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLC
                     KAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQT
                     IFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR"
     gene            complement(39332..40102)
                     /locus_tag="RHX79_001177"
     CDS             complement(39332..40102)
                     /locus_tag="RHX79_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414583.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein FixA"
                     /protein_id="HDV2196373.1"
                     /translation="MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEA
                     ACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTAS
                     ALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVE
                     RELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAVDA
                     WSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI"
BASE COUNT         9736 a        11133 c        10612 g         8939 t
ORIGIN      
        1 aaaaatcgca aaacatataa ttcaatacaa atcatcagga taggttttgc aacgcgtgca
       61 ttttgtcccc tttttcctcg ttgattagat gcaaaaattt atgctgaaat atgtcaaccg
      121 atgaaaagcg tcggtagtta agcagaaatt aatatcgctt actttaacca ccgcagcaca
      181 attagctaat tttacggatg cagaactcac gctggcggga cgtttttatt gcgtcagggt
      241 tgacatccgt ttttgtatcc agtaactcta aaagcatatc gcattcatct ggagctgatt
      301 taatgactca catcgttcgc tttatcggtc tactactact aaacgcatct tctttgcgcg
      361 gtagacgagt gagcggcatc cagcattaag ccagcacgca gtcaaacaaa aaacccgcgc
      421 cattgcgcgg gtttttttat gcccgaagcg aggcgctcta aaagagacaa ggacccaaac
      481 catgagccag caagtcatta ttttcgatac cacattgcgc gacggtgaac aggcgttaca
      541 ggcaagcttg agtgtgaaag aaaaactgca aattgcgctg gcccttgagc gtatgggtgt
      601 tgacgtgatg gaagtcggtt tccccgtctc ttcgccgggc gattttgaat cggtgcaaac
      661 catcgcccgc caggttaaaa acagccgcgt atgtgcgtta gctcgctgcg tggagaaaga
      721 tatcgacgtg gcggccgaat ccctgaaagt cgccgaagcc ttccgtattc atacctttat
      781 tgccacttcg ccaatgcaca tcgccaccaa gctgcgcagc acgctggatg aagtgatcga
      841 acgcgctatc tatatggtga aacgcgcccg taattacacc gatgatgttg aattttcttg
      901 cgaagatgcc gggcgtacac ccattgccga tctggcgcga gtggtcgaag cggcgattaa
      961 tgccggtgcc accaccatca acattccgga caccgtgggc tacaccatgc cgtttgagtt
     1021 cgccggaatc atcagcggcc tgtatgaacg cgtacctaac atcgacaaag ccattatttc
     1081 cgtacatacc cacgacgatt taggcctggc ggtcggcaac tcactggcgg cggtacatgc
     1141 cggtgcacgc caggtggaag gtgcaatgaa cgggatcggc gagcgtgccg gtaactgttc
     1201 gctggaagaa gtcatcatgg cgattaaagt tcgtaaggat attctcaacg tccacaccgc
     1261 cattaatcac caggagatat ggcgcaccag ccagttagtt agccagattt gtaatatgcc
     1321 gatcccggca aacaaagcca ttgttggcag cggcgcattc gctcactcct ccggtatcca
     1381 ccaggatggc gtgctgaaaa accgcgaaaa ctacgaaatc atgacaccag aatctattgg
     1441 tctgaaccaa atccagctga atctgacctc tcgttcgggg cgtgcggcgg tgaaacatcg
     1501 catggatgag atggggtata aagaaagtga atataattta gacaatttgt acgatgcttt
     1561 cctgaagctg gcggacaaaa aaggtcaggt gtttgattac gatctggagg cgctggcctt
     1621 catcggtaag cagcaagaag agccggagca tttccgtctg gattacttca gcgtgcagtc
     1681 tggctctaac gatatcgcca ccgccgccgt caaactggcc tgtggcgaag aagtcaaagc
     1741 agaagccgcc aacggtaacg gtccggtcga tgccgtctat caggcaatta accgcatcac
     1801 tgactataac gtcgaactgg tgaaatacag cctgaccgcc aaaggtcacg gtaaagatgc
     1861 tctgggtcag gtggatattg tcgccaacta caacggtcgc cgcttccacg gcgtcggcct
     1921 ggccaccgat attgtcgagt cctccgccaa agccatggtg cacgtactga acaatatctg
     1981 gcgtgccgca gaagtcgaaa aagagttgca acgcaaagct caacacaacg aaaacaacaa
     2041 ggaaaccgtg tgatgtcgaa gaattaccat attgccgtat tgccggggga cggtattggt
     2101 ccggaagtga tgacccaggc gctgaaagtg ctggatgccg tgcgcaaccg ctttgcgatg
     2161 cgcatcacca ccagccatta cgatgtaggc ggcgcagcca ttgataacca cgggcaacca
     2221 ctgccgcctg cgacggttga aggttgtgag caagccgatg ccgtgctgtt tggctcggta
     2281 ggcggtccga aatgggaaca tttaccacca gaccagcaac cagaacgcgg cgcgctgttg
     2341 cctttgcgta agcacttcaa attattcagc aacctgcgcc cggcaaaact gtatcagggg
     2401 ctggaagcat tctgtccgct gcgtgcagac attgccgcta acggcttcga catcctgtgc
     2461 gtgcgcgaac tgaccggcgg catctatttc ggtcagccaa aaggccgcga aggtagcgga
     2521 caatatgaaa aagcgtttga taccgaggtg tatcaccgtt ttgagatcga gcgtattgcc
     2581 cgcatcgcgt ttgaatctgc tcgtaaacgt cgccacaaag tcacctcaat cgacaaagct
     2641 aacgtgctgc aatcctctat tttatggcgt gaaatcgtca acgagatcgc cacggaatac
     2701 ccggatgtcg aactggcgca tatgtacatc gacaacgcca ccatgcagct gattaaagat
     2761 ccatcacagt ttgacgttct gctgtgctcc aacctgtttg gcgacattct gtctgacgag
     2821 tgcgcaatga tcactggctc gatggggatg ttgccttccg ccagcctgaa cgagcaaggt
     2881 tttggtctgt atgaaccggc aggcggctca gcaccagata tcgcaggcaa aaacatcgcc
     2941 aacccgattg cgcaaattct gtcgctggca ctgctgctgc gctacagcct ggatgccgat
     3001 gatgcggctt gcgccattga acgcgccatt aaccgcgcat tagaagaagg cattcgcacc
     3061 ggggatttag cccgtggcgc tgccgccgtt agtaccgatg aaatgggcga tatcattgcc
     3121 cgctatgtgg cagaaggggt gtaatcatgg ctaaaacgtt atacgaaaaa ttattcgacg
     3181 ctcacgtagt gtacgaagcc gaaaacgaaa ccccgctgtt atatatcgac cgccacctgg
     3241 tgcatgaagt gacctcaccg caggcgtttg atggtctgcg cgcccacggt cgcccggtac
     3301 gtcagccggg caaaaccttc gccactatgg atcacaacgt ctctacccag accaaagaca
     3361 ttaatgcctg tggtgaaatg gcgcgcatcc agatgcagga gctgattaaa aactgcaaag
     3421 aatttggcgt cgagctgtat gacctgaatc acccgtatca ggggatcgtc cacgtaatgg
     3481 ggccggaaca gggcgtcacc ttgccgggga tgaccattgt ctgcggcgac tcgcataccg
     3541 ccacccacgg cgcgtttggc gcactggcct ttggtatcgg cacttccgaa gttgaacacg
     3601 tactggcaac acaaaccctg aaacagggcc gtgcgaagac catgaaaatt gaagtccagg
     3661 gcaaagccgc gccgggcatt acagcaaaag atatcgtgct ggcaattatc ggtaaaactg
     3721 gcagcgcagg cggcaccggg catgtggtgg agttttgcgg cgaagcaatt cgtgatttaa
     3781 gcatggaagg tcgtatgacc ctgtgcaata tggcaatcga aatgggcgca aaagccggtc
     3841 tggttgcacc ggacgaaacc acctttaact atgtcaaagg ccgtttgcat gcgccgaaag
     3901 gcaaagattt cgacgacgcc gttgcctact ggaaaaccct gcaaaccgac gaaggcgcaa
     3961 ctttcgatac cgttgtcact ctgcaagcag aagaaatttc accgcaggtc acctggggca
     4021 ccaatccagg ccaggtgatt tccgtgaacg acaatattcc cgatccggct tcgtttgccg
     4081 atccggttga acgcgcgtcg gcagaaaaag cgctggccta tatggggctg aaaccgggca
     4141 ttccgctgac cgaagtggct atcgacaaag tgtttatcgg ttcctgtacc aactcgcgca
     4201 ttgaagattt acgcgcggca gcggagatcg ccaaagggcg aaaagtcgcg ccaggcgtgc
     4261 aggcactggt ggttcccggc tctggcccgg taaaagccca ggcggaagcg gaaggtctgg
     4321 ataaaatctt tattgaagcc ggttttgaat ggcgcttgcc tggctgctca atgtgtctgg
     4381 cgatgaacaa cgaccgtctg aatccgggcg aacgttgtgc atccaccagc aaccgtaact
     4441 ttgaaggccg ccaggggcgc ggcgggcgca cgcatctggt cagcccggca atggctgccg
     4501 ctgctgctgt gaccggacat ttcgccgaca ttcgcaacat taaataagga gcacaccatg
     4561 gcagagaaat ttatcaaaca cacaggcctg gtggttccgc tggatgccgc caatgtcgat
     4621 accgatgcaa tcatcccgaa acagtttttg cagaaagtga cccgtacggg ttttggcgcg
     4681 catctgttta acgactggcg ttttctcgat gaaaaaggcc aacagccaaa cccggacttc
     4741 gtgctgaact tcccgcagta tcagggcgct tccattttgc tggcacgaga aaacttcggc
     4801 tgtggctcct cgcgtgagca cgcgccctgg gcattgaccg actacggttt taaagtggtg
     4861 attgcgccga gttttgctga catcttctac ggcaatagct ttaacaacca gctgctgccg
     4921 gtgaaattaa gcgatgcaga agtggacgaa ctgtttgcgc tggtgaaagc caatccgggg
     4981 atccatttcg acgtggatct ggaagcgcaa gaggtgaaag cgggagagaa aacctatcgc
     5041 tttaccatcg atgccttccg ccgccactgc atgatgaacg gtctggacag tattgggctt
     5101 accttgcagc acgacgacgc cattgccgct tatgaagcaa aacaacctgc gtttatgaat
     5161 taatcccctt gcccggtcaa atgaccgggc tttccgctat cgtccacgtc atcaaacgtc
     5221 tttaaccttt gcggttaaaa ataatgcgac aacagaaata accgcaatta cccagtagac
     5281 agcaaagtgc ccccaacttt gtgcaattgc tccctgaata acgccagcca gaattacccc
     5341 ggtagaaata ctgttagtaa ataaggtggt agctgccccc gctcttccag gcattaaatc
     5401 ctgaaaccat agcatcccaa tacccgcaac aatgccgata aatacagcgt taaaaagttg
     5461 cagcgtcatc aacgccatac ggctatgaaa gaaaatcaat ccggtgtaaa acagtactcc
     5521 tgccgccact gctatgacca tcattcgccg cttaccataa cgtttgacat agtagccagc
     5581 cagaatcatt gctggtattt ccagtccagc tgccgtcccc atcaggaaac ccgccagttt
     5641 gtctggcaat cctaactcgc tactgatcca caacggcata tcaataatgt acatggtgtt
     5701 gcaggtccac attaacgtcg aggcgacaaa taacatccgt acgttactat cctgccagcc
     5761 accttgcatt gataaagcat tttccgacgg cagttctacc cgcgccacag acggaagcat
     5821 aaatgcaatc aataccagac tgagtgtgaa tatcccggcg gcaatcgaaa acatcaccgt
     5881 aaagccgtaa ttcaacgcca gcataaaggc caacggtgga ccgataaccc atgccagaga
     5941 aagctgcgca cgcatcaccg agctaaacat caccacttct cgcgccgagt tatccgcata
     6001 ttcccgcgcc agagcaaata actgtggcat tgccgtattg gccagagatg ccagaagcac
     6061 accacaggtg ataagcgtca gataatgacg attaaatgca aacaatagcg cattgccgat
     6121 agccatcaaa cagcaaaata taatcagttt tcgccgatcg ccctgactgt cagaacgttt
     6181 tgccaaccag aggcttacgc cgatcccagc aatagcattc accgtataaa agagtccgat
     6241 ccagaaaggt tgcgcgccaa cctcacgact cagaaataag ctcaatgtag gagcctgtag
     6301 cgccccggcc acccccatca taaaagcgac cagcataaat gccgcgtaaa caccgttcat
     6361 acggcgagcc atcgtcatta tccagatcat acgttccctt tttagcgcgg cgagaataaa
     6421 aaaaaccagc aggtataatc tgctggcggg tgattttaca ccaatactca gtcacacatg
     6481 atgcaggcaa gtcaactttc agaattgcgg tcatcccact gcatcagttc ttcaagcatg
     6541 gttaatcgtt gtgggacgct taaccaacgc aaccagcaca acttcgctgt cgcggtaaaa
     6601 tagtgctgat aaaactgacg catggggcac ctccttgctt catcgttagg aattattgac
     6661 ttaatatagg gaaaataaaa ttgctgtctt ttgcgcagga gttccccttt tatgccatct
     6721 gctcgtctgc aacaacagtt catccgcctg tggcaatgct gcgagggtaa atcgcaggac
     6781 acaacgctca acgaactggc agcgttattg agctgctcgc gtcgtcatat gcgcaccctg
     6841 ctcaacacca tgcaggatcg cggctggctg acgtgggaag cggaagtcgg gcgtggtaaa
     6901 cgctcgcgtc tgacattcct ctataccggg ctggcgcttc agcaacagcg ggcggaagac
     6961 ctgctggagc aggatcgtat cgaccaacta gtgcagttgg ttggcgacaa agcgactgtg
     7021 cggcaaatgc tggtttctca tctgggccgc agcttccgcc aggggcggca catcctgcgc
     7081 gtgctctact atcgtccgtt gcgtaatctg ctacctggca gcgcattgcg ccgttccgaa
     7141 acccatattg cccggcaaat cttcagttcg ctaacgcgca taaatgagga aaatggggaa
     7201 ctggaagcag acatcgccca ccactggcag caaatatcac cgcttcactg gcgtttcttt
     7261 ttgcgtccag gagtccattt tcatcatggt cgtgaactgg aaatggacga cgtgatcgcc
     7321 tctttaaaac gaatcaatac gctgccgctc tattcgcata ttgcggacat tgtgtcgccg
     7381 acgccctgga cgctggatat ccatctcacg caaccggacc gctggttacc gttactgctg
     7441 ggacaagttc cggcgatgat cctgccgcgc gaatgggaaa ccctcagtaa ctttgccagc
     7501 catcccatcg gcaccggtcc gtatgcggtg atccgcaaca ccaccaatca actgaaaatt
     7561 caggcattcg atgacttctt cggttaccgg gcattaatcg atgaagttaa cgtctgggtt
     7621 ctgccggaaa ttgccgacga gccagctgga ggtctgatgc taaaaggtcc acagggtgag
     7681 gaaaaagaga ttgaaagccg cctggaggaa ggttgctact atttactgtt cgacagccgc
     7741 acccatcgcg gggcgaatca gcaagtcagg gactgggtaa gctatgtgct ttctccaact
     7801 aatctggtct atttcgctga ggaacagtac cagcaactgt ggttcccggc ttatggactg
     7861 ctcccccgtt ggcaccatgc ccgcaccata aagagcgaaa aaccggctgg cctggaaagc
     7921 ctcaccctga ccttttatca ggatcacagt gagcatcggg tgattgccgg gatcatgcag
     7981 cagattctgg caagtcacca ggtcacgctg gaaatcaaag agatcagcta cgatcagtgg
     8041 catgaaggag agatcgagag cgatatctgg cttaacagcg ccaactttac gctgccgctg
     8101 gatttttcgc tgttcgcgca cttgtgcgag gtgccgctgc tccaacactg tattccgatc
     8161 gactggcaag ccgacgccgc ccgctggcgc aatggcgaaa tgaacctggc gaactggtgc
     8221 cagcaactgg tcgccagtaa agcaatggtg ccgcttatcc accactggct gatcattcag
     8281 ggacaacgca gtatgcgcgg cctgcgtatg aataccctcg gctggttcga ttttaaatca
     8341 gcgtggtttg cgccgccgga tccatgattg ctggtagata acaaaatcac tacactaacg
     8401 ccgttctcaa cggggtgcca cgcaaacgcg tgcgctgaga aaatacccgt cgaacctgat
     8461 ccggataacg ccggcgaagg gatttgaggc tccttctcaa gtcctttgcc actctttttt
     8521 gaggtgcaaa gtgttaaaaa aatgtcttcc cctgctgttg ctgtgcacag cgcccgtttt
     8581 cgctaaaccc gttctgactg tttataccta cgattccttc gccgccgact gggggcctgg
     8641 tccaaagatc aaaaaagctt ttgaagccga ctgtaactgc gaactgaaac tggtggcgct
     8701 ggaagatggc gtttcgcttc tcaaccgtct acggatggaa ggcaaaaata gtaaagccga
     8761 tgtggtgctg gggctggata acaatctgtt agacgccgcc agtaaaaccg gactatttgc
     8821 caaaagcggt gtggcagcgg atgccgttaa cgttcccggc ggctggaata atgacacttt
     8881 cgtcccgttt gattacggct atttcgcctt cgtctatgac aagaacaaac tgaaaaaccc
     8941 gccgcaaagc ctgaaagaat tggttgagag cgatcaaaac tggcgggtga tttatcagga
     9001 tccgcgcacc agtacgccgg ggctgggcct gctgttgtgg atgcaaaaag tctatggcga
     9061 tgacgcccca caagcctggc aaaaactggc gaagaaaacc gtcacggtca ccaaaggctg
     9121 gagcgaagcc tacggcctgt ttttaaaagg tgaaagcgat ctggtactga gttacaccac
     9181 ctctccggct tatcacattc tcgaagagaa aaaagataac tacgccgccg cgaactttag
     9241 cgaaggtcac tatctgcagg tggaagtcgc cgcccgcacc gctgccagca agcagccgga
     9301 gctggcgcaa aaattcctcc agtttatggt ttctccggct tttcagaatg cgatcccaac
     9361 cggtaactgg atgtatccgg tggcaaatgt cacgctgcct gccgggtttg aacaattgac
     9421 caaaccggcc accacgctgg agttcacacc agctgaagtg gctgcacaac gtcaggcatg
     9481 gattagcgaa tggcaacgcg ccgtcagccg ttaattcccg gctggttaat tccaggtgta
     9541 agcgccgcca cgctggtggt agcggttgcg ctcgcggcgt ttctcgccct gtggtggaac
     9601 gcgccgcagg gtaactgggt ggcagtctgg caggacagct acctgtggca tgtggtgcgc
     9661 ttctccttct ggcaggcgtt tctctcggcg ctactctctg tcgtacccgc gatattcctc
     9721 gcccgcgccc tctatcgcag gcgctttccg ggtcggctgg cgctgttgcg tctgtgcgca
     9781 atgaccttga tcctcccggt gctagttgct gttttcggca ttcttagcgt ctatggtcgt
     9841 cagggctggc tggcatcgct ctgccaatcg ctcggtctgg agtggacctt ttcgccctac
     9901 ggcctgcaag gcattttgct ggcgcacgta ttttttaatc tgccgatggc gagccgctta
     9961 ttactccagg cactggaaaa cattcccggc gaacaacgtc agcttgccgc ccagcttggg
    10021 atgcgcggct ggcatttttt ccgcttcgtc gaatggccgt ggctacggcg acaaatcccg
    10081 ccggttgccg cgcttatctt tatgctctgt ttcgccagct tcgccaccgt gctatcgctg
    10141 ggcggcggtc cgcaggcaac tactatcgag ctggctattt atcaggcgct gagttacgac
    10201 tacgatcctg cccgcgcggc gatgctggcg ctgctccaga tggtgtgttg ccttgggctg
    10261 gtgctgttga gtcagcgact aagtaaggcc attgcgcccg gtaccacgct gctgcaaggc
    10321 tggcgcgatc cggacgatcg tctgcatagc cgcatttgcg acacggtgtt aatagtgctg
    10381 gcgctgctgc tgttgctgcc accgttgctg gcggtgatcg tcgatggggt aaatcgccag
    10441 ttgccggaag tgctggcaca accggtgctg tggcaggcgc tgtggacctc gttgcgtatt
    10501 gcgctggcgg caggtgtatt gtgcgtagtg ctgaccatga tgctgctatg gagcagtcgc
    10561 gaactgcggg cgcggcagaa aatgctggcg ggtcaggcgc tggagatgag cggcatgttg
    10621 atcctcgcca tgccggggat tgtgctggct accggcttct ttttactgct caacaacacc
    10681 attggcctgc cgcaatctgc tgacggcatt gtgattttca ccaatgcgtt aatggcgatc
    10741 ccttatgcgc tgaaagtact ggaaaacccg atgcgcgata tcaccgcccg ctacagtatg
    10801 ttgtgtcagt cgctgggcat tgaaggctgg tcgcgcttaa aagtggtcga gctgcgcgcc
    10861 ctgaaacgtc cactggcgca ggcgctggct tttgcctgcg tgctgtcgat tggtgatttt
    10921 ggcgtagtgg cgttgttcgg taacgatgat ttccgtaccc tgccgtttta tctctaccag
    10981 caaattggct cctatcgcag ccaggacggt gcggtcaccg cgttaattct gctactactc
    11041 tgttttctgc tgtttaccgt gattgaaaaa ctaccggggc gaaatgttaa aactgactga
    11101 tatcacctgg ctttatcacc atttgccgat gcgttttagc ttaacggtag aacgcggcga
    11161 gcaggtggca atcctcgggc caagcggcgc gggtaaaagt accctgctga atttgatcgc
    11221 cggttttctg acgccagcca gcggttcgct gactatcgac ggcgttgatc acaccacgac
    11281 gccgccgtca cgccgtccgg tatcgatgct gtttcaggaa aacaacctgt tcagtcacct
    11341 gacggtcgcg cagaacatcg ggctggggct taatccggga ttgaagctga acgcggcgca
    11401 gcaggagaaa atgcacgcta tcgcccgcca gatggggatt gataatttaa tggcgcggtt
    11461 accgggcgag ctttccggcg gtcagcgaca gcgcgtggcg ttagcgcgtt gtctggtgcg
    11521 cgaacagccg attttattgc tcgatgaacc gttctctgcg ctcgatccgg cgttacgtca
    11581 ggagatgctg acgctggtga gcacgagctg ccagcagcaa aaaatgacgc tattgatggt
    11641 gtcgcacagt gtggaagatg cggcgcggat cgccacacgc tcggtggtgg tcgccgacgg
    11701 gcgcatcgcc tggcagggta agaccaatga gttgttgagc ggtaaggcga gtgcttcggc
    11761 actattgggg attacgggtt agtatgcact gtcggatgcg gcgtgaacgc cttatccgac
    11821 ctacgggtag tgcgttttgt aggcctgata agacgcggtc agcgtcgcat caggcaaccc
    11881 gcacaagact atctcctaac ccccaaccac tttacgcaaa atatcgatat acaccggcat
    11941 caacgggtgg cgaattaaca ccaccagcgc caccacgccg atggcagaaa ttaacggcgt
    12001 cagccacaac aaacggccgc gcgacaaata atgacttaaa cgatcggttg ctttaccgct
    12061 gcgccataac cgccagcaca gccagccacc aacccacaaa aataccgccg tcgccagcag
    12121 caaccattta aactcgccgc tctgcattcc ggctggaata tcgatcgccg cgcccgccag
    12181 aatcccaggc aggaagtaaa acggtggcca cagcaggcag ccgataatat tcggcgtaat
    12241 gaattttgcc accggcagat ccagcattcc cgccaccatt ggcaccagcg gacgcgtcgg
    12301 gccaacaaag cgaccgacca gaatggtgaa catgctgtgt tgatgcaacg catgttcagt
    12361 tttatcgagt aatgctttgt ttttcttcag aaatgaccag cgatgcaacg gctttttaaa
    12421 acgccagccc agccagaagg agatccagtc gcccagcagg caaccgacga tccctgccag
    12481 ccaggcgtgc cagaaactta actcgccgct gccaatcagc gctcccagcc ccgccatcag
    12541 caccgtaccg ggtagaatca aaccgaccag cgccagcgac tccagaaagg ccaccaacac
    12601 caccgccatc aatgaataca cggtagattg ggtaataaag tgttccagca atgcttgcat
    12661 aatgtgcctg tcaaatggac gaagcaggga ttctgcaaac cctatgctac tccgtcaagc
    12721 cgtcaattgt ctgattcgtt accaattatg acaacttgac ggctacatca ttcacttttt
    12781 cttcacaacc ggctcggaac tcgctcgggc tggccccggt gcatttttta aatacccgcg
    12841 agaaatagag ttgatcgtca aaaccaacat tgcgaccgac ggtggcgata ggcatccggg
    12901 tggtgctcaa aagcagcttc gcctggctga tacgttggtc ctcgcgccag cttaagacgc
    12961 taatccctaa ctgctggcgg aaaagatgtg acagacgcga cggcgacaag caaacatgct
    13021 gtgcgacgct ggcgatatca aaattgctgt ctgccaggtg atcgctgatg tactgacaag
    13081 cctcgcgtac ccgattatcc atcggtggat ggagcgactc gttaatcgct tccatgcgcc
    13141 gcagtaacaa ttgctcaagc agatttatcg ccagcagctc cgaatagcgc ccttcccctt
    13201 gcccggcgtt aatgatttgc ccaaacaggt cgctgaaatg cggctggtgc gcttcatccg
    13261 ggcgaaagaa ccccgtattg gcaaatattg acggccagtt aagccattca tgccagtagg
    13321 cgcgcggacg aaagtaaacc cactggtgat accattcgcg agcctccgga tgacgaccgt
    13381 agtgatgaat ctctcctggc gggaacagca aaatatcacc cggtcggcaa acaaattctc
    13441 gtccctgatt tttcaccacc ccctgaccgc gaatggtgag attgagaata taacctttca
    13501 ttcccagcgg tcggtcgata aaaaaatcga gataaccgtt ggcctcaatc ggcgttaaac
    13561 ccgccaccag atgggcatta aacgagtatc ccggcagcag gggatcattt tgcgcttcag
    13621 ccatactttt catactcccg ccattcagag aagaaaccaa ttgtccatat tgcatcagac
    13681 attgccgtca ctgcgtcttt tactggctct tctcgctaac ccaaccggta accccgctta
    13741 ttaaaagcat tctgtaacaa agcgggacca aagccatgac aaaaacgcgt aacaaaagtg
    13801 tctataatca cggcagaaaa gtccacattg attatttgca cggcgtcaca ctttgctatg
    13861 ccatagcatt tttatccata agattagcgg atcctacctg acgcttttta tcgcaactct
    13921 ctactgtttc tccatacccg tttttttgga tggagtgaaa cgatggcgat tgcaattggc
    13981 ctcgattttg gcagtgattc tgtgcgagct ttggcggtgg actgcgccag cggtgaagag
    14041 atcgccacca gcgtagagtg gtatccccgt tggcaaaaag ggcaattttg tgatgccccg
    14101 aataaccagt tccgtcatca tccgcgtgac tacattgagt caatggaagc ggcactgaaa
    14161 accgtgcttg cagagcttag cgtcgaacag cgcgcagctg tggtcgggat tggcgttgac
    14221 acaaccggct cgacgcccgc accgattgat gccgacggta acgtgctggc gctgcgcccg
    14281 gagtttgccg aaaacccgaa cgcgatgttc gtattgtgga aagaccacac tgcggttgaa
    14341 gaagcggaag agattacccg tttgtgccac gcgccgggca acgttgacta ctcccgctac
    14401 attggcggta tttattccag cgaatggttc tgggcaaaaa tcctgcatgt gactcgccag
    14461 gacaccgccg tggcgcaatc tgccgcatcg tggattgagc tgtgcgactg ggtgccagct
    14521 ctgctttccg gtaccacccg cccgcaggat attcgtcgcg gacgttgcag cgccgggcat
    14581 aaatctctgt ggcacgaaag ctggggcggc ttgccgccag ccagtttctt tgatgagctg
    14641 gacccgatcc tcaatcgcca tttgccttcc ccgctgttca ctgacacctg gactgccgat
    14701 attccggtgg gcaccttatg cccggaatgg gcgcagcgtc tcggcctgcc tgaaagcgtg
    14761 gtgatttccg gcggcgcgtt tgactgccat atgggcgcag ttggcgcagg cgcacagcct
    14821 aacgcactgg taaaagttat cggtacttcc acctgcgaca ttctgattgc cgacaaacag
    14881 agcgttggcg agcgggcagt taaaggtatt tgcggtcagg ttgatggcag cgtggtgcct
    14941 ggatttatcg gtctggaagc aggccaatcg gcgtttggtg atatctacgc ctggttcggt
    15001 cgcgtactca gctggccgct ggaacagctt gccgcccagc atccggaact gaaagcgcaa
    15061 atcaacgcca gccagaaaca actgcttccg gcgctgaccg aagcatgggc caaaaatccg
    15121 tctctggatc acctgccggt ggtgctcgac tggtttaacg gtcgtcgcac accgaacgct
    15181 aaccaacgcc tgaaaggggt gattaccgat cttaacctcg ctaccgacgc tccgctgctg
    15241 ttcggcggtt tgattgctgc caccgccttt ggcgcacgcg caatcatgga gtgctttacc
    15301 gatcagggga tcgccgtcaa taacgtgatg gcgctgggcg gcatcgcgcg gaaaaaccag
    15361 gtcattatgc aggcctgctg cgacgtgctg aatcgcccgc tgcaaattgt tgcctctgac
    15421 cagtgctgtg cgctcggtgc ggcgattttt gctgccgtcg ccgcgaaagt gcacgcagac
    15481 atcccatcag cccagcaaaa aatggccagt gcggtagaga aaaccctgca accgcgcagc
    15541 gaacaggcac aacgctttga acagctttat cgccgctatc agcaatgggc gatgagcgcc
    15601 gaacaacact atcttccaac ttccgccccg gcacaggctg cccaggccgt tgcgactcta
    15661 taaggacacg ataatgacga tttttgataa ttatgaagtg tggtttgtca ttggcagcca
    15721 gcatctgtat ggcccggaaa ccctgcgtca ggtcacccaa catgccgagc acgttgttaa
    15781 tgcgctgaat acggaagcga aactgccctg caaactggtg ttgaaaccgc tgggcaccac
    15841 gccggatgaa atcaccgcta tttgccgcga cgcgaattac gacgatcgtt gcgctggtct
    15901 ggtggtgtgg ctgcacacct tctccccggc caaaatgtgg atcaacggcc tgaccatgct
    15961 caacaaaccg ttgctgcaat tccacaccca gtttaacgcg gcgctgccgt gggacagtat
    16021 cgatatggac tttatgaacc tgaaccagac tgcacatggc ggtcgcgagt tcggcttcat
    16081 tggcgcgcgt atgcgtcagc aacatgccgt ggttaccggt cactggcagg ataaacaagc
    16141 ccatgagcgt atcggctcct ggatgcgcca ggcggtctct aaacaggata cccgtcatct
    16201 gaaagtctgc cgttttggcg ataacatgcg tgaagtagcg gtcaccgatg gtgataaagt
    16261 tgccgcacag atcaagttcg gtttctccgt caatacctgg gcggttggcg atctggtgca
    16321 ggtggtgaac tccatcagcg acggcgatgt taacgcgctg gtcgatgagt acgaaagctg
    16381 ctacaccatg acgcctgcca cacaaatcca cggcgaaaaa cgacagaacg tgctggaagc
    16441 ggcgcgtatt gagctgggga tgaagcgttt cctggaacaa ggtggcttcc acgcgttcac
    16501 caccaccttt gaagatttgc acggtctgaa acagcttcca ggtctggccg tacagcgtct
    16561 gatgcagcag ggttacggct ttgcgggcga aggcgactgg aaaaccgccg ccctgcttcg
    16621 catcatgaag gtgatgtcaa ccggtctgca gggcggcacc tcctttatgg aggactacac
    16681 ctatcacttc gagaaaggta atgacctggt gctcggctcc catatgctgg aagtctgccc
    16741 gtcgattgcc gtagaagaga aaccgatcct cgacgttcag catctcggta ttggtggcaa
    16801 ggacgatcct gcccgactga tcttcaatac ccaaaccggt ccagcgattg tcgccagcct
    16861 gattgatctc ggcgatcgtt accgtctgct ggttaactgt atcgacacgg tgaaaacacc
    16921 gcactccctg ccgaaactgc cggtggcgaa tgcgctgtgg aaagcgcaac cggatctgcc
    16981 aactgcttcc gaagcgtgga tcctcgctgg tggcgcgcac cataccgtct tcagccatgc
    17041 gctgaacctc aacgatatgc gccagttcgc cgagatgcac gacattgaaa tcacggtgat
    17101 tgataacgac acccgcctgc cagcgtttaa agacgcactg cgctggaacg aagtgtatta
    17161 cggatttcgt cgctaagtag ccacatcagg tatgtaacgc ctgatgcgac gctgacgcgt
    17221 cttatctggc ctacacgctg cgattttgta ggccggataa gcaaagcgca tccggcattg
    17281 ttttccccct cgcccctttg gggagagggc cggggtgagg ggaaacgacc tctcaggagt
    17341 caacatgtta gaagatctca aacgccaggt attagaagcc aacctggcgc tgccaaaaca
    17401 caacctggtc acgctcacat ggggcaacgt cagcgccgtt gatcgcgagc gcggcgtctt
    17461 tgtgatcaaa ccttccggcg tcgattacag cgtcatgacc gctgacgata tggtcgtggt
    17521 tagcatcgaa accggtgaag tggttgaagg tacgaaaaag ccctcctccg acacgccaac
    17581 tcaccggctg ctctatcagg cattcccctc cattggcggc attgtgcata cgcactcgcg
    17641 ccacgccacc atctgggcgc agtcgggtca gtcgattcca gcaatcggca ccacccacgc
    17701 cgactatttc tacggcacca ttccctgcac ccgcaaaatg accgacgcag aaatcaacgg
    17761 cgaatatgag tgggaaaccg gtaacgtcat cgtagaaacc tttgaaaaac agggtatcga
    17821 tgcagcgcaa atgcccggcg ttctggtcca ttcccacggc ccgtttgcat ggggcaaaaa
    17881 tgccgaagat gcggtgcata acgccatcgt gctggaagag gtcgcttata tggggatatt
    17941 ctgccgtcag ttagcgccgc agttaccgga tatgcagcaa acgctgctgg ataaacacta
    18001 tctgcgtaag catggcgcga aggcatatta cgggcagtaa tgactgtata aaaccacagc
    18061 caatcaaacg aaaccaggct atactcaagc ctggtttttt gatggatttt cagcgtggcg
    18121 caggcaggtt ttatcttaac ccgacactgg cgggacaccc cgcaagggac agaagtctcc
    18181 ttctggctgg cgacggacaa cgggccgttg caggttacgc ttgcaccgca agagtccgtg
    18241 gcgtttattc ccgccgatca ggttccccgc gctcagcata ttttgcaggg tgaacaaggc
    18301 tttcgcctga caccgctggc gttaaaggat tttcaccgcc agccggtgta tggcctttac
    18361 tgtcgcgccc atcgccaatt gatgaattac gaaaagcgcc tgcgtgaagg tggcgttacc
    18421 gtctacgagg ccgatgtgcg cccgccagaa cgctatctga tggagcggtt tatcacctca
    18481 ccggtgtggg tcgagggtga tatgcacaat ggcactatcg ttaatgcccg tctgaaaccg
    18541 catcccgact atcgtccgcc gctcaagtgg gtttctatag atattgaaac cacccgccac
    18601 ggtgagctgt actgcatcgg cctggaaggc tgcgggcagc gcatcgttta tatgctgggg
    18661 ccggagaatg gcgacgcctc ctcgcttgat ttcgaactgg aatacgtcgc cagccgcccg
    18721 ctgctgctgg aaaaactcaa cgcctggttt gcaaaccacg atcccgatgt gatcatcggc
    18781 tggaacgtgg tgcagttcga tctgcgaatg ctgcaaaaac atgccgagcg ttaccgtctt
    18841 ccgctgcgtc ttgggcgcga taatagcgag ctggagtggc gcgagcacgg ctttaaaaac
    18901 ggcgtctttt ttgcccaggc taaaggtcgg ctaattatcg acggtatcga ggcgctgaaa
    18961 tccgcgttct ggaatttctc ttcattctcg ctggaaactg tcgctcagga gctattaggc
    19021 gaaggaaaat ctatcgataa cccgtgggat cgaatggacg aaattgaccg ccgtttcgcc
    19081 gaagataaac ctgcgctggc aacttataac ctgaaagatt gcgagctggt gacgcagatc
    19141 ttccacaaaa ctgaaatcat gccattttta ctcgaacgag caacggtgaa cggcctgccg
    19201 gtggatcggc acggcggttc ggtggcagcg tttggtcatc tctattttcc gcgaatgcat
    19261 cgcgctggtt atgtcgcgcc taatctcggc gaagtgccac cgcacgccag ccctggcggc
    19321 tacgtgatgg attcacggcc agggctttat gattcagtgc tggtgctgga ctataaaagc
    19381 ctgtacccgt cgatcatccg cacctttctg attgatcccg tcgggctggt tgaaggcatg
    19441 gcgcaacctg atccagagca cagtaccgaa ggttttctcg atgcctggtt ctcacgggag
    19501 aaacattgcc tgccggagat tgtgactaac atctggcacg ggcgcgatga agccaaacgt
    19561 cagggtaata agccgctttc gcaggcgctg aagatcatta tgaatgcctt ttatggcgtg
    19621 ctcggcacca ccgcctgccg cttcttcgat ccgcgcctgg catcgtcgat caccatgcgt
    19681 ggtcatcaga tcatgcggca gaccaaagca ttgattgaag cgcagggcta cgacgttatc
    19741 tacggagata ccgactcgac ttttgtctgg ctaaaaggtg cacattcgga agaagaggcg
    19801 gcgaaaatcg gtcgtgtact ggtgcagcac gttaacgcct ggtgggcgga aacgctgcaa
    19861 aaacaacggc tgaccagcgc attagaactg gagtatgaaa ctcatttctg ccgttttctg
    19921 atgccaacca ttcgcggagc cgataccggc agtaaaaagc gctacgccgg gctgattcag
    19981 gagggcgata aacagcggat ggtgtttaaa gggctggaaa ccgtgcgcac cgactggacg
    20041 ccgctggccc agcagtttca gcaggagcta tacctgcgca tcttccgcaa cgagccatat
    20101 caggaatatg tacgcgaaac catcgacaaa ctgatggcgg gtgaactgga tgcgcgactg
    20161 gtttaccgta aacgccttcg ccgtccgctg agcgagtatc agcgtaatgt gccgcctcat
    20221 gtacgcgccg ctcgccttgc cgatgaagaa aaccaaaagc gcggtcgccc cttgcaatat
    20281 cagaatcgcg gcaccattaa gtacgtatgg accaccaacg gcccggagcc gctggactac
    20341 caacgttcac cactggatta cgaacactat ctgacccgcc agctacaacc cgtggcggag
    20401 ggaatactcc cttttattga ggataatttt gctacactta tgaccgggca acttgggcta
    20461 ttttgagcaa aaaaaagagt tcgccagata ccattttgat gcgtgacgaa tgctttgcca
    20521 tccagtacca tagcgccctt tccattcctg gacctgaata acaccactac ctcataagca
    20581 cggtagcggg tggttattgc ctgcaattaa agatatagag ccgaacacat atgcctttta
    20641 cacttggtca acgctggatc agcgatacag aaagcgaatt gggacttgga accgttgtcg
    20701 cggtggatgc gcgaactgtc actttacttt tcccatctac tggtgaaaac cgtctgtacg
    20761 cacgcagtga ttcccccgtg acccgcgtga tgttcaaccc tggtgatact attaccagcc
    20821 atgacggctg gcagatgcaa gtcgaagaag taaaagaaga aaatggcttg ctgacctata
    20881 tcggtactcg cctggatact gaagagtccg gcgtagccct gcgtgaagtt ttccttgata
    20941 gcaaactggt gttcagcaaa ccgcaggacc gtctgtttgc cgggcagatt gaccgtatgg
    21001 accgctttgc gctgcgttat cgcgcgcgta agtattccag cgaacagttc cgtatgccgt
    21061 acagcggcct gcgcggtcag cgtaccagcc tgattccgca tcagctcaac atcgctcatg
    21121 atgttggtcg ccgccacgcg ccgcgcgtcc tgctggctga cgaagtgggt ttagggaaaa
    21181 ccattgaagc cgggatgatc ctgcatcagc aactgctctc tggcgctgct gaacgtgtgc
    21241 taattatcgt cccggaaacc ttacagcatc agtggctggt agaaatgctg cgccgtttca
    21301 acctgcgctt tgcgctattt gatgatgagc gttatgccga agctcagcac gatgcttaca
    21361 acccgtttga caccgaacag ctggtgattt gctcgctgga ttttgcccgt cgtagcaaac
    21421 agcgcctgga acatctctgt gaagccgaat gggacctgct ggtggtcgat gaagcgcatc
    21481 acctggtgtg gagcgaagat gcgccaagcc gtgaatatca ggccattgaa caactggcag
    21541 agcacgtgcc gggcgttctg ctgctgaccg cgaccccgga acagctgggg atggaaagcc
    21601 acttcgcccg tctgcgtctg ctggacccga accgtttcca cgattttgcg cagttcgttg
    21661 aagagcagaa aaattatcgt ccggttgcgg acgccgttgc catgctgctg gcaggtaaca
    21721 aactgagcaa tgacgaactg aacatgctcg gcgagatgat cggcgagcag gatatcgagc
    21781 cgctgttgca ggcagcaaac agcgacagcg aagatgccca gagcgcccgt caggagctgg
    21841 tttcgatgct gatggatcgc cacggcacca gccgcgtgct gttccgtaac acgcgtaacg
    21901 gtgtgaaagg attcccgaaa cgcgagctgc acaccattaa actgccgcta ccgacgcagt
    21961 atcagacggc tattaaagtc tccggcatta tgggcgcacg taaaagtgcg gaagatcgtg
    22021 ctcgcgatat gctctacccg gagcgtattt atcaggaatt tgaaggtgat aacgccacct
    22081 ggtggaactt cgatccgcgc gttgagtggc tgatgggcta cctgaccagc catcgctctc
    22141 agaaagtgct ggtgatctgc gccaaagctg ccactgcgct gcaactggag caggtactgc
    22201 gcgaacgtga aggtattcgc gctgcggtgt tccacgaagg tatgtcgatt atcgaacgtg
    22261 accgcgctgc cgcctggttt gccgaagaag acaccggcgc acaggtactg ctgtgctcag
    22321 aaatcggttc tgaaggacgt aacttccagt tcgccagcca catggtgatg tttgacctgc
    22381 cattcaaccc ggatctactg gagcagcgta ttggtcgtct ggatcgtatc ggccaggcgc
    22441 acgatattca gatccatgtg ccttatctgg agaaaaccgc tcagtcggtg ctggtgcgct
    22501 ggtatcacga aggtctggat gcatttgagc acacctgccc gaccggacgc actatttacg
    22561 atagcgtata caacgatctg attaactatc tggcttcacc ggatcaaacc gaaggctttg
    22621 acgatctgat caaaaactgc cgcgagcaac atgaagcgct gaaagcacag ctggaacagg
    22681 gtcgtgaccg cctgctggaa atccactcca acggtggcga aaaagcccag gcactggcag
    22741 aaagcattga agagcaggat gacgatacca acctgatcgc cttcgccatg aacctgttcg
    22801 atattatcgg tatcaatcag gacgatcgcg gcgacaacat gatcgtgctg acgccgtccg
    22861 atcatatgct ggtgccggac ttccctggcc tgtcggaaga tggcatcacc atcacctttg
    22921 atcgtgaagt ggcactggcg cgtgaagatg cacagtttat tacctgggag catccgctga
    22981 tccgcaacgg tctggatctg atcctttctg gcgataccgg tagcagcacg atttcactgt
    23041 taaaaaacaa agcgttgccg gtaggtacgc tgttggtgga actgatttat gtggttgaag
    23101 cccaggctcc gaagcagttg cagctcaacc gcttcctgcc accgacgccg gtacgtatgc
    23161 tgctggataa aaacggcaac aacctggcgg cgcaggtaga gtttgaaacc tttaaccgcc
    23221 agcttaacgc ggttaaccgt cacaccggca gcaaactggt taacgccgtg cagcaggatg
    23281 ttcacgctat ccttcaactg ggtgaagcgc agatcgagaa atctgcccgt gcattgattg
    23341 atgcagcgcg taacgaagcc gacgaaaaac tgtctgccga gctgtctcgt ctggaagctc
    23401 tgcgtgcagt gaacccgaac attcgtgacg acgaactgac cgccattgag agcaaccgtc
    23461 agcagataat ggaaagcctg gatcaggcag gttggcgtct ggatgccctg cgtttgatcg
    23521 ttgtgacgca tcagtaacgg agctgaaaat ggggatggaa aactacaatc caccgcagga
    23581 accctggttg gttatcctgt atcaggatga ccacattatg gtggtcaaca agccgagcgg
    23641 tttgttgtct gtgccgggtc gtctggaaga gcacaaagac agcgtgatga cgcgcattca
    23701 gcgtgattat ccgcaggcag aatcggtgca tcgtctggat atggctacca gcggcgtgat
    23761 tgtagtggcg ctgaccaaag ccgcggagcg ggagttaaaa cgccagttcc gcgagcgcga
    23821 gccgaaaaag cagtatgtgg cccgcgtctg ggggcatcca tcccccgcag aaggtctggt
    23881 ggatctgccg ctgatttgcg actggccaaa ccgcccgaaa cagaaagtct gttacgaaac
    23941 gggtaaacct gcgcagacgg aatatgaagt ggtggagtat gcggcggata acacggcaag
    24001 agtggtgtta aaaccgatta ccgggcgttc gcatcaattg cgtgtgcata tgctggcgct
    24061 ggggcatccg attctcggcg atcgttttta tgcatcacca gaagcgagag cgatggcacc
    24121 gcgtttgttg ctacatgcag agatgttgac gattacccat ccggcgtatg gcaatagtat
    24181 gacgtttaaa gcgccagcgg atttttaatc gtcacgctgg cgcagttcgg taggcggata
    24241 aggcgttcac gccgcatccg gcaattgtgc gccgattgcc tgatgcgacg cgggccgcgt
    24301 cttatcaggc ctacagttta aaacttattt aaaccctttc tgctgcttta tcagctcata
    24361 tgcctgctga atttcctgcg ctttctgctt cgccatctcc atcatctcag gcggcaaacc
    24421 tttcgccacc agcttatcgg gatggtgttc actcatcagc ttacggtagg cacgtttgat
    24481 ggtggtcgca tcatccgtcg gcttcacgcc cagcacatta caggcatctt ccagcgtcgg
    24541 gccacgctgc gcttgctgcc agttaccacc gccagattgc tgctgataac cgccgccaaa
    24601 ctgtgcaccg ccctgcatca tgcgcaaaaa ctggtcaaac tgggcgcggg agatccctaa
    24661 ttcttcagca atgacataca gcaccgcccg ttcattcggg tgcagtgaac catcagcaaa
    24721 cgccgcctga atctggatct ccagaaacat acgaattaag tcaaaacgac caaagcagac
    24781 actgcgaaac tggcgcatct tttcgcgcag cgggtaattg tctgattttc ccacccggaa
    24841 cgcattttgc gccgcagtac gggaagcgcc atgaagattc attcggtcca tcaactggct
    24901 agcgatatga atatcagcct ccgtgacgcg acctttggat ttggttaaat gccccatcac
    24961 ttcaaaagtg gtggcaaaaa acagcgcctg acgctcacgc tggttggcga accacgccat
    25021 tttacggcta cgggctttat caaacatatg gccaattaac aggcctaaca ctacgcccca
    25081 aaagccgccg cccatcagta aggccacggc cacgccaatg atttttcccc aatactgcat
    25141 atattcccca aatcgacaca cggatatcag ggctatctcc cacaatataa aggtgctttt
    25201 accgttttcc ggctgcggtc aattgtggga catcgcctat aatttgcatt atcatacctg
    25261 tcattcaatg ccgtgcctaa caccactgac gctattcgga caggattaac actagcgtag
    25321 agatgacgag tacgttagtc tctgaccgtt tgtcacgcgc aacgttaccg atgatggaac
    25381 aataaaatca acgtatgaaa aaacgtatcc ccactctcct ggccaccatg attgccaccg
    25441 ccctttatag tcaacaggga ctggcagccg acctcgcctc acagtgcatg ttgggcgtgc
    25501 caagctatga ccgtcctctg gtacagggcg ataccaatga cttacccgtg actatcaatg
    25561 ctgaccacgc gaaaggggac tacccggatg acgccgtgtt tactggcagc gtggatatca
    25621 tgcagggtaa cagccgtctg caggccgacg aagtgcagct ccatcaaaaa gaggcaccag
    25681 gacaaccgga gccggtacgt accgttgatg cgctcggtaa tgtccattac gacgataacc
    25741 aggtgatcct caaagggccg aaaggctggg cgaatctgaa caccaaagat accaacgtct
    25801 gggaaggtga ttaccagatg gtgggtcgcc agggtcgcgg taaagcggac ctgatgaaac
    25861 aacgtggcga aaaccgctat accattctgg ataacggtag ctttacctcc tgtctgccgg
    25921 gttctgacac ctggagcgtg gtaggtagcg aaattattca tgaccgcgaa gaacaagttg
    25981 cggagatctg gaacgcccgc tttaaggtgg gtccggtacc gatcttttat agcccctatt
    26041 tgcagttgcc ggtgggtgac aaacgtcgct ctggtttctt gatcccgaac gccaagtaca
    26101 ccaccaccaa ctactttgag ttctacctgc catattactg gaacatcgcg ccaaatatgg
    26161 atgccaccat cacgccgcat tatatgcatc gtcgtggcaa catcatgtgg gagaacgaat
    26221 tccgctacct ctcccaagcg ggcgctggct tgatggaact ggactatctg ccttcagata
    26281 aagtctatga agatgaacac ccgaacgatg acagttcacg tcgttggtta ttctactgga
    26341 accactccgg ggtcatggat caggtgtggc gtttcaacgt cgactacacc aaggtcagcg
    26401 atcctagcta cttcaatgat ttcgataaca agtacggttc cagtactgac ggctacgcaa
    26461 cgcaaaaatt cagcgttggc tatgcggtgc aaaacttcaa tgccaccgtt tcaaccaagc
    26521 agttccaggt tttcagcgaa cagaacacca gtagctactc ggcagagccg cagttagacg
    26581 ttaattacta ccagaatgat gttggtccgt ttgatacgcg tatttacggc caggcagtgc
    26641 actttgttaa caccagagac gacatgcctg aagcaacccg tgttcacctg gaaccgacca
    26701 tcaatttgcc gctctctaat aactggggca gcatcaatac cgaagcgaag ttgctggcaa
    26761 cccattatca gcaaaccaat cttgactggt ataactccag aaacacgacc aagctggacg
    26821 aatccgttaa ccgcgtaatg ccgcaattca aagttgaggg caaaatggtc tttgaacgcg
    26881 atatggaaat gctggctccg ggttataccc aaacgctgga accgcgcgcg cagtatttgt
    26941 acgtgccgta tcgcgatcag agcgacatct ataactacga ctcgtctctg ctgcaatctg
    27001 actactctgg cctgttccgg gaccggactt acggcggtct tgaccgtatt gcctccgcta
    27061 accaggtgac gaccggtgtc acatctcgca tatatgatga tgctgccgtt gaacgtttta
    27121 atatttccgt tggtcaaatc tactatttca cggagtctcg cactggcgat gacaacataa
    27181 catgggagaa tgacgacaaa acgggttcac tggtgtgggc aggcgatact tactggcgta
    27241 tctccgagcg ttggggattg cgtggcggga ttcagtacga tacacgtctg gataacgtag
    27301 cgaccagtaa ctccagcatt gaataccgtc gggatgaaga ccgtctggta cagctgaatt
    27361 accgttacgc cagcccggaa tatattcagg ctacgctgcc taagtactat tccactgctg
    27421 agcaatataa gaatggtatt tcgcaggtag gtgctgtcgc cagctggcca attgccgatc
    27481 gttggtccat tgttggggcc tactactacg acaccaatgc gaacaagcaa gccgactcta
    27541 tgttaggtgt gcaatacagc tcctgctgct atgcaattcg cgtcggttac gagcggaagc
    27601 tgaacggttg ggataacgat aaacaacatg cggtatatga caacgcaatc ggctttaaca
    27661 tcgaacttcg cggcctgagc tccaactacg gtctgggtac gcaagagatg ctgcgttcga
    27721 acattctgcc gtatcaaaac actttgtgat ttgttgattt accacgtaat ccgcagtgcg
    27781 gttaattgaa atggaaaaag tatgaagaac tggaaaacgc tgcttctcgg tatcgccatg
    27841 atcgcgaata ccagtttcgc tgccccccag gtagtcgata aagtcgcagc cgtcgtcaat
    27901 aacggcgtcg tgctggaaag cgacgttgat ggattaatgc agtcggtaaa actgaacgct
    27961 gctcaggcaa ggcagcaact tcctgatgac gcgacgctgc gccaccaaat catggaacgt
    28021 ttgatcatgg atcaaatcat cctgcagatg gggcagaaaa tgggagtgaa aatctccgat
    28081 gagcagctgg atcaggcgat tgctaacatc gcgaaacaga acaacatgac gctggatcag
    28141 atgcgcagcc gtctggctta cgatggtctg aactacaaca cttatcgtaa ccagatccgc
    28201 aaagagatga ttatctctga agtgcgtaac aacgaggtgc gtcgtcgcat caccatcctg
    28261 ccgcaggaag tcgaatccct ggcgcagcag gtgggtaacc aaaacgacgc cagcactgag
    28321 ctgaacctga gccacatcct gatcccgctg ccggaaaacc cgacctctga tcaggtgaac
    28381 gaagcggaaa gccaggcgcg tgccattgtc gatcaggcgc gtaacggcgc tgatttcggt
    28441 aagttggcga ttgctcattc tgccgaccag caggcgctga acggcggcca gatgggctgg
    28501 ggccgtattc aggagttgcc ggggatcttc gcccaggcat taagcaccgc gaagaaaggc
    28561 gacattgttg gcccgattcg ttccggcgtt ggcttccata ttctgaaagt taacgacctg
    28621 cgcggcgaaa gcaaaaatat ctcggtgacc gaagttcatg ctcgccatat tctgctgaaa
    28681 ccgtcgccga tcatgactga cgaacaggca cgcgtgaaac tggaacagat tgctgctgat
    28741 atcaagagtg gtaaaacgac ttttgctgcc gcagcgaaag agttctctca ggatccaggc
    28801 tctgctaacc agggcggtga tctcggctgg gctacaccag atattttcga tccggccttc
    28861 cgtgacgccc tgactcgcct gaacaaaggt caaatgagtg caccggttca ctcttcattc
    28921 ggctggcatt taatcgaact gctggatacc cgtaatgtcg ataaaaccga cgctgcgcag
    28981 aaagatcgtg cataccgcat gctgatgaac cgtaagttct cggaagaagc agcaagctgg
    29041 atgcaggaac aacgtgccag cgcctacgtt aaaatcctga gcaactaatg gttaaaaccc
    29101 aacgtgttgt gatcactccc ggcgagcccg ccgggattgg cccggactta gttgtccagc
    29161 ttgcacagcg tgagtggccg gtcgaactgg ttgtttgtgc cgatgccact ctccttaccg
    29221 accgggcagc gatgctcggt ttgccgctca ccctccgccc ttattccccc aactcccctg
    29281 cacaaccgca aactacgggc acattaacgc tacttcctgt cgcgctacgt gaatctgtca
    29341 ctgcggggca gttagcgatt gaaaatggac attacgtggt ggagacgctg gcgcgagcgt
    29401 gtgatggctg tctgaacggt gaatttgctg cgctgatcac aggccccgtg cataaaggcg
    29461 tcattaacga cgcaggcatt ccgtttaccg gtcataccga gtttttcgaa gagcgttcgc
    29521 aggcgaaaaa agtggtgatg atgctggcga ccgaagaact tcgcgtggcg ctggcaacga
    29581 cgcatttacc gctgcgcgat atcgcagatg ctatcacccc tgcacttttg cacgaagtga
    29641 ttgctatttt gcatcacgat ttgcgtacaa aatttggtat tgccgaaccg cgcattctgg
    29701 tctgcgggct gaatccgcac gcgggcgaag gcggtcatat gggtacggaa gagatagaca
    29761 ccattattcc ggtgctcgac gagctgcggg cgcaggggat gaaactcaac gggccgctgc
    29821 ctgccgatac cctgtttcag ccgaaatatc tcgataacgc cgacgccgtg ctggcgatgt
    29881 accacgatca gggtcttccc gtgctaaaat accagggctt cgggcgcggt gtgaacatta
    29941 cgctgggcct gccctttatt cgcacatcag tggaccacgg caccgcgctt gaactggcgg
    30001 gacgtggcga agccgatgtc ggcagtttta ttacggcgct taatctcgcc atcaaaatga
    30061 ttgttaacac ccaatgaata atcgagtcca ccagggccac ttagcccgta aacgcttcgg
    30121 gcaaaacttt ctcaacgatc agttcgtgat cgacagcatt gtttctgcca ttaacccgca
    30181 aaagggccag gcaatggtcg aaatcggccc cggtctggcg gcattgaccg agccggtcgg
    30241 cgaacgtctg gaccagctga cggtcatcga acttgaccgc gatctggcgg cacgtctgca
    30301 aacgcatcca ttcttaggcc cgaaactgac gatttatcag caggatgcga tgacctttaa
    30361 ctttggcgaa ctggccgaga aaatgggtca gccgctgcgt gttttcggca acctgcctta
    30421 taacatctcc acgccgttga tgttccatct gtttagctat actgatgcca ttgccgacat
    30481 gcactttatg ttgcaaaaag aggtggtgaa tcgtctggtt gcaggaccga acagcaaagc
    30541 gtatggtcga ttaagcgtca tggcgcaata ctattgcaac gtgatcccgg tactggaagt
    30601 tccgccgtca gcctttacac caccacccaa agtggattcc gccgtcgtgc gcctggttcc
    30661 tcatgcaacg atgcctcacc cggttaaaga tgttcgtgtg ttgagccgca tcaccaccga
    30721 agcctttaac cagcgtcgta aaaccattcg taacagcctc ggcaacctgt ttagcgtcga
    30781 ggtgttaacg ggaatgggga tcgacccggc gatgcgagcg gaaaatatct ctgtcgcgca
    30841 atattgccag atggcgaact atctggcgga gaacgcgcct ttgcaggaga gttaacgatg
    30901 atcaattcgc cccgagtgtg tattcaggtt caaagcgtct acattgaggc acaatcttca
    30961 cctgataatg aacgttacgt ttttgcttat accgtaacca tacgcaatct ggggcgagcg
    31021 ccagtgcagt tgttggggcg ttactggctg atcaccaatg gcaatggccg tgaaaccgaa
    31081 gtccagggcg aaggagtggt tggcgtccag ccacttatcg cgcctggcga agagtaccag
    31141 tacaccagcg gtgcaatcat tgaaaccccg ctgggcacca tgcagggtca ctacgaaatg
    31201 atcgatgaaa atggcgtccc tttcagcatc gacattcccg tattccgact cgccgttccc
    31261 acactcattc attaaaagaa tatggcgaca taccttattg gcgacgttca tggttgttac
    31321 gatgaactga tcgcattgct gcataaagta gaatttaccc ctgggaaaga taccctctgg
    31381 ctgacgggcg atctggtcgc gcgcggcccg ggttcgctgg atgttctgcg ctatgtgaaa
    31441 tccttaggcg acagcgtacg tctggtgctg ggcaatcacg atctgcatct gctggcggta
    31501 tttgccggga tcagccgcaa taaaccgaaa gatcgcctga caccgctgct ggaagcgccg
    31561 gatgccgacg agctgcttaa ctggctgcgt cgccagcctt tgctgcaaat cgacgaagag
    31621 aaaaagttgg tgatggccca cgcagggatc acgccgcagt gggatctaca gaccgccaaa
    31681 gagtgcgcgc gcgatgtaga agcggtgcta tcgagtgact cctatccctt ctttctcgac
    31741 gctatgtacg gcgatatgcc aaataactgg tcaccggaat tgcgggggct gggaagactg
    31801 cgttttatca ccaacgcctt tacccgtatg cgtttttgct ttccaaacgg tcaactggat
    31861 atgtacagca aagaatcgcc ggaagaagcc cctgccccac tgaaaccgtg gtttgcgatt
    31921 cctggccctg tcgctgaaga atacagcatc gcctttggtc actgggcatc gctggaaggc
    31981 aaaggtacgc cggaaggtat ttacgcgctg gataccggct gctgctgggg tgggtcatta
    32041 acctgcctgc gctgggaaga taagcagtat tttgtccagc cgtcgaaccg gcataaggat
    32101 ttgggcgaag cggcggcgtc ttaaacacag cctgatatag gaaggccgga taagacgcga
    32161 ccggcgtcgc atccggcact agccgtaaat tctatacaaa attaccgccg ctccagaatc
    32221 tcaaagcaat agctgtgaga gttctgcgca tcagcatcgt ggaattcgct gaataccgat
    32281 tcccagtcat ccggctcgta atccgggaaa tgggtgtcgc cttccacttc tgcgtcgata
    32341 tgcgtcagat acagtttttg cgcttttggc aagaactgct cataaacgcg accgccgcca
    32401 atcaccatga tttctggtac gtcaccacac gccgcgatgg cttcatccac cgacttcacc
    32461 cacgttacgc gatcgtccgt acccggttga ctgctgagga taatattttt gcgtcctggc
    32521 aacggacgac cgattgattc ccaggtatgg cggcccataa tcacgggttt atttaaggtg
    32581 ttgcgtttaa accaggcgag atcggcaggc aggttccacg gcatggcgtt ttccatgccg
    32641 ataacgcgat ctaccgctaa cgccgcaatc agactgatca ttgagatttc ccgataaaaa
    32701 aaattgtcgc cactatacgt aaagcgtaaa ccgtcgtcga ctggtgcgag gatgatgttg
    32761 aggaaaattt tatattctgc tggcgagtcc acgctctctc cctggactcg ccgcattaca
    32821 atgaaacaaa aacaaacagt tagctgtaaa gtgtgattta cgtcactctt tattaggatg
    32881 agggtttcgt ttccggttca tccgccatgt tgccggtatg tttaccttct tcggttccct
    32941 gccagccatg tcgttgaatt aatgacagat gttcgcggtc ctcggtaatg atctcactta
    33001 acatcgcgct ggtgcgttta tagaccgccg cgcgggcttt ggtgtcgttc tcaaccattg
    33061 ccatctcttc caccatctga atattaaagc ggcggaacac atcggcacgt tctcgcgctt
    33121 catacggccc cagacctaaa ctttccagtg ccagacgccc ggttttcagc gcaccttcga
    33181 aggtttcacg ctccggcttt tcaacgcctg cctgacgcaa acgaatgtag tggtcgacat
    33241 cgcgggcgcg ggcaataatc tgcaaatgcg ggaaatgttc tttcaccatc tctgtcagtt
    33301 gcaggttggt ttgcggatcg tcgatggcgt taatcagcac ttccgctttc gccgctccgg
    33361 cagattccag taaatccatc cgcgtggcat cgccataaaa cactttcata ccaaatttac
    33421 gcaaggtttc gatatggtcc ggatcgtgat cgagtaccac cattttcacc ccgctggaga
    33481 gcagtaaacg tccggtaatc tgcccaaaac gaccgaatcc ggcgataatc acgcgcggct
    33541 gttcttcgtc gatctcatcg gcttcacgcg cttcctcagt agaagattgc tcaaggcgat
    33601 tgaggatcac cagcagaatc ggcgttgctg ccatcgacag cgccaccgcc agggtcagcg
    33661 atttcgccca ctccggctcc agcacattcg ccatctgcgc cgcgccaaat accacaaagg
    33721 caaactcact gccctgccct aacaacaccg caaaccaacg acgctgttta tttggcactt
    33781 gcaacggtcg ggcaatcagc cacagcatgg cgattttgat gatgaggaaa ccgagcagca
    33841 aaatgacaat gcgcaatggg ttttcaagca gcgtgccaaa gtctatcgac atgccaacac
    33901 cgatgaaaaa cagccccaac agcaaacctt taaatggttc gatatcgctc tccagcgcat
    33961 gacggtattc cgaacttgcc agcagtacgc ccgccagaaa cgcgcccatc gccatcgaca
    34021 agccgacctc ttccagcagc aaaccaaagc caaacacgag gaataacgcc acggcactaa
    34081 acacttcccg caagccagag cgggctacaa aacgcagcgc cggacgcgtg acatagcgcc
    34141 ccagcaatac caccagcacc agcgcacccg ccacttttaa cgccgagaga gcaaatgcgc
    34201 ccatcgtcgt cgaggcactg ctcgttgcca gtagcggaat catcgccacc agcgggatcg
    34261 ccgcgatatc ctggaacagc agcaccgcaa aggcactgcg acccatttgc gtcaccatca
    34321 gattgcgttc attcatcgcc tgcatggcaa tcgccgtaga ggagagcgcc agcgtcatgc
    34381 cgatcaattc cgcgacctgc cagcgcagcc caagtaacat gcagaacaat cccagcaggc
    34441 cgccgcaaat caccatctgc aatgcgccac cgccgaacac tgccgcacgc agcttccaca
    34501 gcctttgtgg atcgagttcg aggccgataa taaacagcat cagcaccacg ccaatctcgg
    34561 caaagtgcag aatagattcg gcatcggtca ccagtcgcag cccccacggg ccaataatgc
    34621 agccggcgat caggtagcca agtaccgatc ccagaccaag acgtaccgca atgggtacaa
    34681 tcagcgctgc cgaaccgaga taaatcagcg cctgaatcag cgtatggcta tccatgatgg
    34741 gcctcctgcc attccagcag acgttgctta tagtgacgcg cctgcccttc gagggtttcg
    34801 tcgtcacaaa taaaggtgca gtgcatggca aacggtggca gccagttcag cccgcagtag
    34861 attgccgtcg cctgtagcgg ctgcgacagc acatcaaagc ccggatgcgc accaatttca
    34921 aaatggcttt ccccgccgcc ggtcgtcacc gcccacagca aatgtttgcc atgcagcgcc
    34981 gtgccgccgt gaccgtaagc ccagccgtgc gagaaaactt tatcgatcca aagtttgagg
    35041 agcggtggaa tgctgtacca ctgcatcggg tgctgccaga cgatcagatc ggcgcgggac
    35101 agcgcctcct gctcggcggc aatatcgata ttgaagtcag gatagagttg ataaagagag
    35161 cgaatttcga cgccttccag cgtccttgcc tgttcaagca tccgtttatt cgcatgggaa
    35221 tgatgcggat acggatgcgc ataaattata agaatcatag gtagcccgcg tgattacgcc
    35281 tttgttttcc cacaaagtgt agtcatatat tcacgcggct tatagtcaat aatattgatt
    35341 cagaaaagag agaaatctga acaaattacc ccattctctg cccgcggatc gtcatattgc
    35401 tggtctgcgc cagtgacatc cctcgagtct ccggggcaaa cgctacggaa atcaacaagc
    35461 caaacagcga gatacccgcc cccattagca tcgtgttact gataccgtaa ttattgataa
    35521 agatcggcag tgcccaggtc gaaacaatgg tgccaatacg gcttaaggac ataatcacgc
    35581 ccacggcaga ggcgcggata tctgtcggga agagttcatt aggatagagc cactgcaaat
    35641 tacccggccc gccagagaaa aaggcataca ccgcaaaggc catcactacc agccagatcc
    35701 ccatatccgg gatcagcccc aaaaccacca gcgccagcgt catcatggca aagctgccaa
    35761 tcaacaatgg acgccgtccg gcagtgttta accacagcat cggcggaata cagccgagca
    35821 taaagaacag gctaatcacc acgttcccca gtgccgcgtt tttgccaacc cccaatccca
    35881 acaaaccaac gatttgcggg ccaaaggtgt aaatggcgaa cattgggatc acctggcagg
    35941 tccagatggc ggcaacaaac agaacaaaag gaaaatggcg gcgattaaac agatcgcgaa
    36001 aacgggtttg ctgcggctgc tcttcatcga aagccaccgg ttcgccaaac agttttatca
    36061 tcatctcttc gcactctttt actcgccctt tgcgtaataa ccagcgggga gattcaggca
    36121 gttcgaatcg accaatcaaa atcaacaaac aggggatcgc cgcgctaccc agcatccagc
    36181 gccagccgcc ttccacatca taaagccagt agccgaccag atcggcgcag gtcgcgccga
    36241 cataccacat ggcggcgata aagctgatgg aaaacgcccg ctgacgggta ctggagaact
    36301 cggtgatcat tgaggtggcg atgggataat ctgcaccgat gacaatgccg ataagtaccc
    36361 gcatcaccaa cagttcgaca ggggatgaga caaacatcgt cgccaccgat atcacgccga
    36421 tggcgatgat atcaatgagg aacattttgc gccgtccgac tttatcggag atatagccaa
    36481 acagcgatgt gccaacgaac agcccggcga gcgttcccgc acccagcaag ccaatccagt
    36541 cagcgtccag tttcagcgcc ggagtcagtt gctccagcgc cacgccaatc attaccagta
    36601 cataaccatc cagaaacgga ccaccgcttc cccacagcaa aatgcggcgg tgaatagagg
    36661 agaatttgag atcgtcaaag tttctggacg gttgcatggg ttattcctgt tttttgcaat
    36721 gagagtcagt gcggcgttac gtatcaaacc aacatcagcc gtaacggaac tccacaccaa
    36781 aggtgccgcg cgggtattcc cactgttcca gcgccgaccc cagccccaga atgcgacagg
    36841 tgccgcactc cagacatccg gcgtaatcga agcgcacact gccgtcatcc tgcttcttgt
    36901 acagacctgc ggggcacgct ttcaccagca gctccagcac ctgtttatca gcatcggcct
    36961 tcacaacaat gtgcggatgc tcttcatcga cattgaattt attgacgccc agtttgacgt
    37021 ccacattgac gggagaagtc ataaaacggt cactcctttc atgccatcct tgatcagatt
    37081 gatgaagccc actttcttgc cgtggcggag gattttcttg cgcatcagtt ccggcgcact
    37141 gccgtcaatg gtgaacaggt cacgcgccac gcccaccgcc agttccgggt agccgctaaa
    37201 catgcgtggg ttatcaagga aggccggtag tttctggtac atacgcatat cgcgcagcgg
    37261 gccactctca agatgctgac gatattccgc cagtttttgc ttactgaaat cgtcgctttt
    37321 catcgctgaa agcacggttt ttgctgcggc ttccccggcg gcaatcgcca gatccatacc
    37381 gcgaatggta aaaccgaggt tcatacacat tccggcggca tcaccggcaa tcaatacgcc
    37441 gtcaccaacc aactccggca gcatgttgat gcctgcttcc ggcactacgt gagcggaata
    37501 ttccaccagc ttgccacccg cgatcagcgg tgcaacggcc ggatgttgtt tgaaatcttc
    37561 cagcatttgc ggcaccgatt tttttgcgtc atgcagatga tgcagaccac aaaccagccc
    37621 cagcgacagg gtattttcat tggtataaag gaagccgccg cccatcaggc catcggtggg
    37681 tgatcccgca aacagacaag ccgcgccctg attaccctgc aactgaaaac ggtcttcgat
    37741 taccgacttc ggtaactcga tcagttcctt cacgccaacc gccacatccg tcggtttaac
    37801 gcgttttgcc atccccagct tttcggcaag gatggagttc actccatcag caaggatcac
    37861 cgttttcgct tcaatcacat cgccatcggc ttctacaccg acgactttgc catcgcgctg
    37921 tacgaggtta tcgacgcgga tcccggtaat taactgcgcg cccgcttctt cggcctgctc
    37981 catcagccag gcatcaaatt tactgcgcaa aacggagtaa gaacgctggg atggcgaggt
    38041 ttcgtcacca ttgcagtagt ccatagtcat cgctgacttt tccgtcataa acgcgagttt
    38101 ttcatgggtg atcaggcgtt ctacgggggc ggagtcggcg aaaccaggaa taatgtgttc
    38161 cagactgtgg gcatagagac gcccgccggt gacgttcttg gcacctgcgg aattgccacg
    38221 ctcgataact aacacttgcg ccccttcgcg ggcgagcacc agtgcggcaa ccgaaccggc
    38281 aagcccagca ccgacgatga tggcgtcaaa gatatcttcg gacataagag ctccctgtca
    38341 gcggcagggc caaaatgcag ccctgccaga gtggatcaac gcgctaaagc tgcggtcagc
    38401 gccggaagga tcttcacggc gtcgccaaca atgccgtaat ccgcgtactg gaagatcggc
    38461 gcatttttat ctttattgat ggcgaaaatg gtttgcgacg cgttagcgcc aaccatgtgc
    38521 tggatctgcc cggagatccc caccgccagg tacagttcag gtttcagcat caggttggag
    38581 ataccgacat agcgttcgtg ctccatccat ttttcgtttt ccgccaccgg acgagaacag
    38641 gccaactccg cacctatcgc cttgcaaagc tgttctgcca gcgcaatgtt ctctttgctg
    38701 ccaataccgc gaccgacgct gaccaccaga cgggctttgt cgagatcgac gctgttgctc
    38761 tggcgcgcct gggttgccgt gcgggtaatc gccacagccg gagcctgcca ctccacggtg
    38821 tgcgtttcgc cagtgcgtga cgcgtctggc tgagccgcat cgaacgtgcc gctgctgatg
    38881 gtcagtaccg catacggcgt ggcaatgcgt tcttcgccaa tcgccagacc accgtaaacc
    38941 atgtgtttca ctgtcgcttt accgtcctgt acgctgacgg tgctggcatc gttagacacc
    39001 gccgctttaa ggcgataacc cagttttgcc gccagtaatt tgccgcgacg ggtgtttggc
    39061 agcagcacca ggccgtctgc gccgtgctgg cgaatagtgt cagccatgac accggcgtaa
    39121 tcttcgatca tccgatcgtc cggtttgccg tttaatttcc agacatgatt agcgccgagc
    39181 tggattgcct gtacgccgtc ggcatcattg aggacaaagg tgttgatttg attagctaaa
    39241 gcctgcgcac cgttcatcag ttccggcaga cgagaagggg tatcgctgaa tacccagact
    39301 tgagaaaacg tgttcatagc atcccctgta attaaatgac tttgcgaaga ttttcagcaa
    39361 atgcggcgat ctgttcttcg ccgtcgcctt caatcacgat gcgctgacgt tcgcgctgtt
    39421 tcggcgcagc aacctgttgt tcagaccagg cgtccacggc gttaaaaccg atatccgccg
    39481 ccgaccatac ctggactggc tttttcgccg cgccgagaat ggctttcatc gaaggaattt
    39541 gtggggagtt gatatcagtg gaaacagcaa caaccgcagg cagcggaatg cttaaggttt
    39601 cggtttcatc ttccagttcg cgctcaacgg tgagggtatc tgccgtcagg gagataattt
    39661 tgctgacgcc gttaactgcc ggaatattga ggatttcgcc caccagcaga ccaacctgct
    39721 gggcataaag gtcggaagaa ccatcgccac agaggatcaa atcaaagcct gctttctggg
    39781 cggctgcagc cagtgcgctc gccgtttgtt gcggcagtgc ctgctcgaac tggtcatcaa
    39841 tcaccacaat cagttcatcc gggccgcgcg atagcacatc tttacgccct ttggcgttgg
    39901 tcagggcttt accgcccaca cttaaggccg tcacctgcgc ctctgctgcc tgttgcttta
    39961 gctggcaagc cgcttcaata gcgttcagat cgtattggct tattttggca tcggctttgc
    40021 tgaagtctaa tgaaccatca gcattattga ccgcaatatc ctgttcatca ggcacgcact
    40081 tatagcaagt aataatcttc attgcatctc cagaaatcat gaaggaaacg tcgttcatat
    40141 cggtggtgtt aattacagat atcacgccct ttaatttgga aataaaactt taatcaccaa
    40201 tattgaaaat gtcacacgca gataaatcca actttcaata ttgttaagtt cctcaccaat
    40261 attgaaaaca tggcgtagaa aaaagaaatt ttcaatattg ctttatggat caccaatatt
    40321 gaaagtcaga tgctattttt ttactcacaa cacaacataa caaactgatt aataatcaaa
    40381 attaacgaga aaatcgccct ctattcaccc gaaacaaaaa
//
LOCUS       DAPGWB010000022        40266 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.022, whole genome shotgun sequence.
ACCESSION   DAPGWB010000022 DAPGWB010000000
VERSION     DAPGWB010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 40266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40266
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.022"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            114..1478
                     /locus_tag="RHX79_001178"
     CDS             114..1478
                     /locus_tag="RHX79_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308508.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196374.1"
                     /translation="MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG
                     ASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIW
                     GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH
                     KLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLN
                     FGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK
                     MKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAG
                     YKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPP
                     YVSSLRIEIPADIAANEALKVRLLETEGIKEVLIAEEEHSAYVKIDSKVTNRFEVEQA
                     IRQA"
     gene            complement(1606..2097)
                     /gene="yajQ"
                     /locus_tag="RHX79_001179"
     CDS             complement(1606..2097)
                     /gene="yajQ"
                     /locus_tag="RHX79_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414960.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide binding protein YajQ"
                     /protein_id="HDV2196375.1"
                     /translation="MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDA
                     SKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGI
                     ESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKN
                     FRD"
     gene            2265..3176
                     /gene="panE"
                     /locus_tag="RHX79_001180"
     CDS             2265..3176
                     /gene="panE"
                     /locus_tag="RHX79_001180"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HDV2196376.1"
                     /translation="MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVET
                     DGSIFNESLTANDPDFLATSDLLLVTLKAWQVYDAVKSLASTLPVTTPILLIHNGMGT
                     IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGEYSYLADILQTVL
                     PDVAWHNNIRAELWSKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE
                     GHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVP
                     ENTRLFEMVKRKESEYERIGTGLPRPW"
     gene            3139..3729
                     /gene="yajL"
                     /locus_tag="RHX79_001181"
     CDS             3139..3729
                     /gene="yajL"
                     /locus_tag="RHX79_001181"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase YajL"
                     /protein_id="HDV2196377.1"
                     /translation="MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLA
                     ITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIV
                     AAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGPGT
                     AIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE"
     gene            complement(3783..5231)
                     /gene="thiI"
                     /locus_tag="RHX79_001182"
     CDS             complement(3783..5231)
                     /gene="thiI"
                     /locus_tag="RHX79_001182"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HDV2196378.1"
                     /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVV
                     RHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQL
                     EGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLL
                     LIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEI
                     GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVA
                     ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE
                     DFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIAQQTE
                     QEVVEVETVNGFGPNDVILDIRSIDEQEDKPLKVEGIDVVSLPFYKLSTKFGDLDQNR
                     TWLLWCERGVMSRLQALYLREQGFNNVKVYRP"
     gene            5437..5679
                     /gene="xseB"
                     /locus_tag="RHX79_001183"
     CDS             5437..5679
                     /gene="xseB"
                     /locus_tag="RHX79_001183"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDV2196379.1"
                     /translation="MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQ
                     LARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE"
     gene            5679..6578
                     /gene="ispA"
                     /locus_tag="RHX79_001184"
     CDS             5679..6578
                     /gene="ispA"
                     /locus_tag="RHX79_001184"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HDV2196380.1"
                     /translation="MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGG
                     KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH
                     VKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQAL
                     DLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLA
                     FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ
                     LAEQSLDTSALEALADYIIQRNK"
     gene            6603..8465
                     /gene="dxs"
                     /locus_tag="RHX79_001185"
     CDS             6603..8465
                     /gene="dxs"
                     /locus_tag="RHX79_001185"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDV2196381.1"
                     /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS
                     RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG
                     GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMA
                     FEAMNHAGDIRPDMLVVLNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG
                     VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ
                     FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAA
                     KDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIY
                     STFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMT
                     PSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAI
                     LNFGTLMPDAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAG
                     SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA"
     gene            8520..9494
                     /gene="yajO"
                     /locus_tag="RHX79_001186"
     CDS             8520..9494
                     /gene="yajO"
                     /locus_tag="RHX79_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414953.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxyxylulose-5-phosphate synthase YajO"
                     /protein_id="HDV2196382.1"
                     /translation="MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPII
                     KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSR
                     AQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH
                     ASQFAQALKLQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGR
                     LTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSK
                     PGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK"
     gene            complement(9548..10066)
                     /gene="pgpA"
                     /locus_tag="RHX79_001187"
     CDS             complement(9548..10066)
                     /gene="pgpA"
                     /locus_tag="RHX79_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDV2196383.1"
                     /translation="MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLA
                     AIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL
                     MALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
                     FIGHHWPLGILS"
     gene            complement(10044..11021)
                     /gene="thiL"
                     /locus_tag="RHX79_001188"
     CDS             complement(10044..11021)
                     /gene="thiL"
                     /locus_tag="RHX79_001188"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDV2196384.1"
                     /translation="MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAI
                     STDTLVAGNHFLHDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLES
                     FSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT
                     PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLI
                     SDLGHIVKASDCGARIDLALLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNR
                     GALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTFDWKGYDHFATP"
     gene            complement(11099..11518)
                     /gene="nusB"
                     /locus_tag="RHX79_001189"
     CDS             complement(11099..11518)
                     /gene="nusB"
                     /locus_tag="RHX79_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDV2196385.1"
                     /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD
                     VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV
                     AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK"
     gene            complement(11538..12008)
                     /gene="ribE"
                     /locus_tag="RHX79_001190"
     CDS             complement(11538..12008)
                     /gene="ribE"
                     /locus_tag="RHX79_001190"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDV2196386.1"
                     /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV
                     KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA
                     HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA"
     gene            complement(12097..13200)
                     /gene="ribD"
                     /locus_tag="RHX79_001191"
     CDS             complement(12097..13200)
                     /gene="ribD"
                     /locus_tag="RHX79_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDV2196387.1"
                     /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ
                     RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQD
                     PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR
                     TAMASGESQWITSPQARRDVQRQRAQSHAILTSSATVLADDPALTVRWSELDEQTQAL
                     YPQQNLRQPVRIVIDSQNRVTPEHRIVQQPGETWFARTQEDSSEWPETVRTLLIPEHK
                     GHLDLVVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLC
                     TLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA"
     gene            complement(13204..13653)
                     /gene="nrdR"
                     /locus_tag="RHX79_001192"
     CDS             complement(13204..13653)
                     /gene="nrdR"
                     /locus_tag="RHX79_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HDV2196388.1"
                     /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA
                     ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE
                     VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED"
     gene            13804..14343
                     /locus_tag="RHX79_001193"
     CDS             13804..14343
                     /locus_tag="RHX79_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HDV2196389.1"
                     /translation="MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLN
                     KETVKITQQNRLNAKSSSGVYLLPGAKTPARLESQIGTLRMSLVNITPDADGTTLTLR
                     IQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKG
                     ISVEQLDFVRIHDIQPVMQ"
     gene            14642..15526
                     /gene="tsx"
                     /locus_tag="RHX79_001194"
     CDS             14642..15526
                     /gene="tsx"
                     /locus_tag="RHX79_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-specific channel-forming protein Tsx"
                     /protein_id="HDV2196390.1"
                     /translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS
                     YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI
                     EPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMS
                     LSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG
                     DDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGN
                     FNVRSTGWGGYLVVGYNF"
     gene            complement(15703..16050)
                     /locus_tag="RHX79_001195"
     CDS             complement(15703..16050)
                     /locus_tag="RHX79_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH nuclease family protein"
                     /protein_id="HDV2196391.1"
                     /translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV
                     HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN
                     PFADLKAMMNKKK"
     gene            complement(16179..17150)
                     /gene="secF"
                     /locus_tag="RHX79_001196"
     CDS             complement(16179..17150)
                     /gene="secF"
                     /locus_tag="RHX79_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDV2196392.1"
                     /translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR
                     GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE
                     GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVY
                     VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS
                     DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT
                     MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP"
     gene            complement(17161..19008)
                     /gene="secD"
                     /locus_tag="RHX79_001197"
     CDS             complement(17161..19008)
                     /gene="secD"
                     /locus_tag="RHX79_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDV2196393.1"
                     /translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA
                     ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA
                     LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE
                     KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR
                     LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT
                     ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD
                     EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV
                     INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI
                     EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA
                     GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII
                     LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI"
     gene            complement(19036..19368)
                     /gene="yajC"
                     /locus_tag="RHX79_001198"
     CDS             complement(19036..19368)
                     /gene="yajC"
                     /locus_tag="RHX79_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000007628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDV2196394.1"
                     /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK
                     RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL
                     PKGTMKAL"
     gene            complement(19391..20518)
                     /gene="tgt"
                     /locus_tag="RHX79_001199"
     CDS             complement(19391..20518)
                     /gene="tgt"
                     /locus_tag="RHX79_001199"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDV2196395.1"
                     /translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE
                     EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR
                     KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME
                     MSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVG
                     EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH
                     LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN
                     LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD"
     gene            complement(20574..21644)
                     /gene="queA"
                     /locus_tag="RHX79_001200"
     CDS             complement(20574..21644)
                     /gene="queA"
                     /locus_tag="RHX79_001200"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDV2196396.1"
                     /translation="MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT
                     DLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK
                     PGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDA
                     DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD
                     TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF
                     FDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF
                     FSYGDAMFITYNPQAINERVGE"
     gene            21737..22318
                     /gene="acpH"
                     /locus_tag="RHX79_001201"
     CDS             21737..22318
                     /gene="acpH"
                     /locus_tag="RHX79_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP phosphodiesterase"
                     /protein_id="HDV2196397.1"
                     /translation="MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHM
                     HRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFV
                     CYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALR
                     DSWYDLDAHYDALETRFWQFYPRMMAQASHKAL"
     gene            complement(22323..24140)
                     /gene="malZ"
                     /locus_tag="RHX79_001202"
     CDS             complement(22323..24140)
                     /gene="malZ"
                     /locus_tag="RHX79_001202"
                     /EC_number="3.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin glucosidase"
                     /protein_id="HDV2196398.1"
                     /translation="MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDN
                     EEMSVSMHKQRSQQQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMP
                     PARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILR
                     DWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYR
                     HVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPES
                     PWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWSMDGW
                     RLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAM
                     NYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDT
                     ARFKTLLGRDIARLLLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQD
                     TALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEV
                     VLPASPLLNAVQWQCKEGHGQLTDGILALPAISATVWMN"
     gene            complement(24296..25669)
                     /gene="proY"
                     /locus_tag="RHX79_001203"
     CDS             complement(24296..25669)
                     /gene="proY"
                     /locus_tag="RHX79_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline-specific permease ProY"
                     /protein_id="HDV2196399.1"
                     /translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV
                     LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV
                     AIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI
                     IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII
                     GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH
                     MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT
                     VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK
                     ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD
                     RQLAENQ"
     gene            complement(25745..27064)
                     /gene="brnQ"
                     /locus_tag="RHX79_001204"
     CDS             complement(25745..27064)
                     /gene="brnQ"
                     /locus_tag="RHX79_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transporter carrier
                     protein BrnQ"
                     /protein_id="HDV2196400.1"
                     /translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA
                     AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT
                     ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV
                     ILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV
                     TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFG
                     GGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLS
                     QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF
                     SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH"
     gene            complement(27471..28766)
                     /gene="phoR"
                     /locus_tag="RHX79_001205"
     CDS             complement(27471..28766)
                     /gene="phoR"
                     /locus_tag="RHX79_001205"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HDV2196401.1"
                     /translation="MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI
                     WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS
                     GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD
                     FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP
                     LTVLQGYLEMMDEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNE
                     KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP
                     EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA
                     IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD"
     gene            complement(28824..29513)
                     /gene="phoB"
                     /locus_tag="RHX79_001206"
     CDS             complement(28824..29513)
                     /gene="phoB"
                     /locus_tag="RHX79_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate response regulator transcription
                     factor PhoB"
                     /protein_id="HDV2196402.1"
                     /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNE
                     PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY
                     ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEF
                     KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV
                     RGTGYRFSTRF"
     gene            29703..30905
                     /gene="sbcD"
                     /locus_tag="RHX79_001207"
     CDS             29703..30905
                     /gene="sbcD"
                     /locus_tag="RHX79_001207"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcD"
                     /protein_id="HDV2196403.1"
                     /translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII
                     VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT
                     TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDY
                     YQQQYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI
                     ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT
                     QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE
                     VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH
                     TLAGEHEA"
     gene            30902..34045
                     /gene="sbcC"
                     /locus_tag="RHX79_001208"
     CDS             30902..34045
                     /gene="sbcC"
                     /locus_tag="RHX79_001208"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcC"
                     /protein_id="HDV2196404.1"
                     /translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT
                     TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR
                     NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA
                     FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQV
                     QSLTASLQVLTDEEKQLLTAQQQEQQSLNWLTHLDELQQEASRRQQALQQALAEEEKA
                     QPQLAALSLAQPARNLRPHWERIAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHA
                     ANQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHA
                     EQKLNTLAAITLTLTADEVASALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLMVTIQ
                     NVTLEQTQRNVALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL
                     CGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAALRGQLDALTKQLQRDENE
                     AQSLRQDEQALTQQWQAVTASLNITLQPQDDIQPWLDAQDKHERQLRLLSQRHELQGQ
                     IAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEESWLATRQQEAQSWQQRQN
                     ELTALQNRIQQLTPILETLPQSDDLPHSEETVALDNWRQVHEQCLALHSQQQTLQQQD
                     VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT
                     LVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA
                     DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL
                     TRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH
                     KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK
                     KINGLGYSKLESTFAVK"
     gene            34171..35355
                     /gene="araJ"
                     /locus_tag="RHX79_001209"
     CDS             34171..35355
                     /gene="araJ"
                     /locus_tag="RHX79_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414930.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter AraJ"
                     /protein_id="HDV2196405.1"
                     /translation="MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMI
                     SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG
                     FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF
                     LLIAVFNIAVMASVYFWVPDIRDEAKGKLREQFHFLRSPAPWLIFAATMFGNAGVFAW
                     FSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIV
                     LALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN
                     LGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKP
                     LG"
     gene            complement(35498..36406)
                     /gene="mak"
                     /locus_tag="RHX79_001210"
     CDS             complement(35498..36406)
                     /gene="mak"
                     /locus_tag="RHX79_001210"
                     /EC_number="2.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414928.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructokinase"
                     /protein_id="HDV2196406.1"
                     /translation="MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIA
                     TLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRL
                     ANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPL
                     PWMDEDELRYREEVPCYCGKQGCIETFISGTGFATDYRRLSGHALKGSEIISLVEESD
                     PVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGE
                     CETPVRKAKHGDSSGVRGAAWLWPQE"
     gene            36531..37442
                     /gene="rdgC"
                     /locus_tag="RHX79_001211"
     CDS             36531..37442
                     /gene="rdgC"
                     /locus_tag="RHX79_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HDV2196407.1"
                     /translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG
                     WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT
                     EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
                     LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE
                     ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD
                     ADFILMTGELAALIQNLIEGLGGEAQR"
     gene            complement(37520..37603)
                     /locus_tag="RHX79_001212"
     CDS             complement(37520..37603)
                     /locus_tag="RHX79_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196408.1"
                     /translation="MTQRPWSKLQHKTHNIAALKIIARRSE"
     gene            complement(37600..37941)
                     /locus_tag="RHX79_001213"
                     /pseudo
     CDS             complement(37600..37941)
                     /locus_tag="RHX79_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308469.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2773 domain-containing protein"
     gene            complement(38089..38373)
                     /gene="ppnP"
                     /locus_tag="RHX79_001214"
     CDS             complement(38089..38373)
                     /gene="ppnP"
                     /locus_tag="RHX79_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine/purine nucleoside phosphorylase"
                     /protein_id="HDV2196409.1"
                     /translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE
                     MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL"
     gene            complement(38445..39122)
                     /locus_tag="RHX79_001215"
     CDS             complement(38445..39122)
                     /locus_tag="RHX79_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AroM family protein"
                     /protein_id="HDV2196410.1"
                     /translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE
                     VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI
                     SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL
                     GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR
                     LAAELLV"
     gene            complement(39380..39571)
                     /gene="yaiA"
                     /locus_tag="RHX79_001216"
     CDS             complement(39380..39571)
                     /gene="yaiA"
                     /locus_tag="RHX79_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YaiA"
                     /protein_id="HDV2196411.1"
                     /translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH
                     PTAQEAMDAKKRYEDPDKE"
     gene            complement(39621..40145)
                     /gene="aroL"
                     /locus_tag="RHX79_001217"
     CDS             complement(39621..40145)
                     /gene="aroL"
                     /locus_tag="RHX79_001217"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroL"
                     /protein_id="HDV2196412.1"
                     /translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT
                     VAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCA
                     PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV
                     ISEIRSALAQTINC"
BASE COUNT         9966 a        10797 c        10180 g         9323 t
ORIGIN      
        1 aaacatacct gacacacaaa ttactctcct ctgtaatatt ttctcattaa cactctgttt
       61 acccaacatg cgctccgcac tacactatgt gggcattttt ttaaggggtg gtaatgaacg
      121 attataaaat gacgccaggt gagaggcgcg cgacctgggg tttagggacc gtattctcgt
      181 tgcgcatgct gggcatgttt atggttctgc cggttctgac cacgtacggc atggctctgc
      241 aaggtgccag cgaagcatta atcggtattg ccattggtat ttatggtctg actcaggccg
      301 tttttcagat tccgtttggc ctgctttccg accgcattgg tcgcaaacca ttaattgtcg
      361 gtgggctggc ggtgtttgcc gccggtagcg ttatcgctgc gctttccgac tccatctggg
      421 gaattattct gggccgggcg ctacaaggct ctggagcaat tgccgccgcc gttatggcgc
      481 tgctttccga tctcacgcgc gaacaaaacc gcaccaaagc gatggcgttt atcggcgtga
      541 gctttggcat tacctttgcc attgcgatgg tgcttggccc gatcatcact cacaaacttg
      601 ggctgcacgc gctgttctgg atgatcgcta ttctggcaac aaccggcatt gcgttgacca
      661 tttgggttgt gcccaacagt agcactcacg tacttaatcg tgagtccgga atggtgaaag
      721 gcagtttcag taaagtgctg gcggaaccgc ggctgcttaa actcaacttt ggcattatgt
      781 gtctgcacat gcttctgatg tctacgtttg ttgccctgcc cggacagcta gctgatgcgg
      841 ggttcccggc ggctgaacac tggaaggtct atctggcgac gatgttaatc gcctttggct
      901 cggtcgtgcc tttcattatc tacgctgaag ttaagcgcaa aatgaagcaa gtctttgtct
      961 tctgcgtcgg gttgatcgtg gttgcggaaa ttgtgttgtg gaacgcacaa acgcagttct
     1021 ggcaactggt ggtcggcgtg cagcttttct ttgtggcgtt taatttgatg gaagcccttc
     1081 tgccctcact tatcagtaaa gagtcgccag caggttacaa aggtacggcg atgggtgtct
     1141 actccaccag ccagtttctt ggcgtggcga ttggcggttc gctgggcggc tggattgacg
     1201 gcatgtttga cggtcagggg gtatttctcg ctggcgcaat gctggccgca gtgtggctgg
     1261 cagtcgccag taccatgaaa gaaccgccgt atgtcagcag tttgcgcatt gaaatcccgg
     1321 cggacattgc cgcaaacgaa gcgttaaaag tgcgtttgct ggaaactgaa ggcatcaaag
     1381 aagtgttgat tgcagaagaa gaacattcag cttatgtgaa aatcgacagc aaagtgacga
     1441 atcgctttga ggttgaacag gcaattcgtc aggcataaaa aacgcggcga attgcctgct
     1501 gcgctacgct tatcaggcct acaaagtttc tgaattacaa acctttgtag gccgaatcag
     1561 gcgttcatgc cgcatctgac atgaacaaaa cgcacatagt cgcgattaat cgcggaagtt
     1621 tttgaactgg aacggctgac cgagatcgcc accacgtacc atcgccatga cagcctgcaa
     1681 atcatcacga gatttgcccg ttacgcggat ttcatcgccc tgaatttgcg cctgcacttt
     1741 cagtttgctg tctttgatca tcttgacgat tttcttctgg gtcgcgctct caatgccctg
     1801 tttcagtttc gcttccacaa accaggtttt accgctatga acgatattct ccggtacatc
     1861 cagcgaactg ccttcaatgc cgcgcttcag cagcttggca cgcagaatat ccagcaactg
     1921 attgacctgg aaatcggact cgctcaacac tttgatggtt ttgctggcgt cgttcagctc
     1981 aaatgaggct tcaacgttac ggaagtcaaa acgggactcc acttcgcggc tcgcgttatc
     2041 gaccgcgtta cgtgcttcct gaagatcaac ttcagagaca atatcgaaag atggcatctt
     2101 ttcctctccc ttcatttttg atgcgaagca taatacccgc aaagttaaat aaccgacagt
     2161 cctgcaccag gacgtatccc ttaattgtgc atagtcgcaa cagcatgcac aattaaggga
     2221 tagccttatt gaacacccgg agtggttgcg ggtgaggagg aacaatgaaa attaccgtat
     2281 tgggatgcgg tgccttaggg caattatggc ttacagcact ttgcaaacag ggtcatgaag
     2341 ttcagggctg gctgcgcgta ccgcaacctt attgtagcgt gaatctggtt gagacagatg
     2401 gttcgatatt taacgaatcg ctgaccgcca acgatcccga ttttcttgcc accagcgatc
     2461 tgctcctggt gacgctgaaa gcatggcagg tttacgatgc cgtcaaaagc ctcgcgtcca
     2521 cactgcctgt aaccacgcca atactgttaa ttcacaacgg catgggcacc atcgaagagt
     2581 tgcaaaacat tcagcagcca ttactgatgg gcaccaccac ccatgccgcc cgccgcgacg
     2641 gcaatgtcat tattcatgtg gcaaacggaa tcacgcatat tggtccggca cggcaacagg
     2701 atggcgaata cagttatctg gcggatattt tgcaaaccgt gttgcctgac gttgcctggc
     2761 ataacaatat tcgcgccgag ctgtggagca agctggccgt caactgtgtg attaatccac
     2821 tgaccgccat ctggaattgc ccgaatggtg aattacgtca tcatccgcaa gaaattatgc
     2881 agatatgcga agaagtcgcg gcagtgatcg agcgcgaagg gcatcatact tcagcagaag
     2941 atttgcgtga ttacgtgatg caggtgattg atgccacagc ggaaaatatc tcgtcgatgt
     3001 tgcaggatat ccgcgcgctg cgccacaccg aaatcgacta tatcaatggt tttctcttac
     3061 gccgcgcccg cgcgcatggg attgccgtac cggaaaacac ccgcctgttt gaaatggtaa
     3121 aaagaaagga gagtgaatat gagcgcatcg gcactggttt gcctcgcccc tggtagtgaa
     3181 gagactgaag ccgtcaccac tatcgatctg ctggttcgcg gcggtatcaa agtcaccact
     3241 gccagcgtcg ccagcgatgg caacctggcc attacctgct cgcgcggcgt gaagctgctg
     3301 gcggatgcgc cgctggtcga ggtggctgat ggcgaatatg acgtgatcgt actgcctggt
     3361 ggcattaaag gcgcagagtg ttttcgcgat agtaccctgc tggttgaaac cgttaaacag
     3421 ttccaccgtt ccgggcgtat cgtcgcggct atttgcgccg cgccagccac cgtgctggtg
     3481 ccgcacgata tcttcccgat tggtaatatg accggcttcc cgacgctgaa agacaaaatt
     3541 cccgctgaac aatggcagga caagcgcgtc gtctgggatg cacgggtaaa attgctgacc
     3601 agccaggggc cggggacagc tatcgacttt ggtctgaaaa ttatcgacct gctggttggg
     3661 cgcgagaaag cccatgaagt ggcatcacaa ctggtgatgg cggcagggat ttataattat
     3721 tacgagtagt gtcggatgcg gtaagcgtcg catctgacca gatgcgacgt tacaaccaca
     3781 aattacgggc gatatacctt cacattgtta aagccctgct cgcgcagata gagcgcctgc
     3841 agacggctca tcaccccgcg ctcacaccac agtagccagg ttctgttctg gtcgagatcg
     3901 ccaaacttgg tgctcagttt atagaacggc agagaaacta catcaatccc ttcgactttc
     3961 agtggcttat cttcctgttc atcgatagaa cggatatcga ggatcacgtc gttcgggccg
     4021 aagccattga cggtttccac ttccaccact tcctgctcgg tctgctgggc gatttcgcgg
     4081 atatcaacgt tattcgcttc ttcaaccact ttatcgagaa tgctgaagtc gaatttctct
     4141 tcttccgctt caatcttcga cttaaccgct ttcaccgtcg ggcttttgga gataacaccg
     4201 caatattccg gcatcgtgcg agcaaagtct tcggtgccaa tctggcgagc caggttgatg
     4261 atgtgctctt tgtcgtaaga aatcagcgga cgcaggatca gcgtatcgga gacgttatca
     4321 atcaggcgca ggttggtcag cgtctgactg gacacctggc cgagcgcttc gccggtgacc
     4381 agcgcctgta cgccgtaacg ttcagccact ttagacgcgg cacgcaccat catacgtttg
     4441 aggataacgc ccatctgacc gtcgtcgatt ttctcgagaa tttccccgac gaccggttcg
     4501 aaattaatag cgacaaaacg cacgcggtgg gagctgccaa aacggttcca cagataatgc
     4561 gccacctgac gcacgccaat ttcatgcgcc gcgccgccaa ggttaaagaa acagtaatgc
     4621 acgcggcagc cgcgacgcat caacatataa ctggaaacac cggagtcgaa accaccggaa
     4681 atgagcgaca gcacatcttc ctgggtgccg atcgggaaac cgccaatacc ttcgtagcgg
     4741 cctttaatca gcaggagacg atcgtcttcc acttccagat ggacagtcac ttccggattg
     4801 gtcagcttca cgcgcgcgga ctcaatatgc tgatttaaac cgccgccgac gtaacgttcc
     4861 acatcaatcg agctaaaatc atgtttgcca cggcgcttca cgcgtacgca gaaggttttg
     4921 ccttccagct gatcgcgata ctgaaccaac gctttctcaa aaatatcgtg catgtcggta
     4981 aacggcacgt cttcgacttc gagaatatgg tggatacccg gaatacgggt cagggcgtcg
     5041 cgaatagcca gacgctggtt ttcatctttt gcgcgaactt cgatgttatc ccagtggcgg
     5101 acgacagcga gcgtctcatc atagtgcttt aaaacgttac gaatgttccc ggtaaggatt
     5161 tttataaagc gcaagcgcac agattggctt ttgatggtga tttccgggaa caatttaatg
     5221 ataaacttca tggcggcaat ggttcgttgg caagccttaa gcgacttgta tagggaaaaa
     5281 tacagcagcc cacacctgcg gctgcatcca ggcgcggaag tataccacta acatcgcttt
     5341 gctgcgcaca tcaccttacc attgcgcgtt atttgctatt tgccctgagt ccgttaccat
     5401 gacggggcga aaaatattga gagtcagaca ttcattatgc cgaagaaaaa tgaggctccc
     5461 gccagctttg aaaaggcgct gagcgagctg gaacagattg taacccgtct ggaaagtggc
     5521 gacctgccgc tggaagaggc gctgaacgag ttcgaacgcg gcgtgcagct ggcacgtcag
     5581 gggcaggcca aattacaaca agccgaacag cgcgtacaaa ttctgctgtc tgacaatgaa
     5641 gacgcctctc taaccccttt tacaccggac aatgagtaat ggactttccg cagcaactcg
     5701 aagcctgcgt taagcaggcc aaccaggcgc tgagccgttt tatcgcccca ctgccctttc
     5761 agaacactcc cgtggtcgaa accatgcagt atggcgcatt attaggtggt aagcgtctgc
     5821 gacccttcct ggtttatgcc accggtcata tgtttggcgt tagcacaaac acgctggacg
     5881 cacccgctgc cgccgtagag tgtatccacg cttactcatt aattcatgat gatttaccgg
     5941 cgatggatga tgacgatctg cgtcgcggtt tgccgacctg ccatgtgaag tttggcgaag
     6001 caaacgcgat tctcgctggc gacgctttac aaacgctggc gttctcgatt ctaagcgatg
     6061 ccaatatgcc ggaagtgtcg gatcgcgaca gaatttcgat gatttctgaa ctggcgagcg
     6121 ccagcggtat tgccggaatg tgcggtggtc aggcattaga tttagacgcg gaaggcaaac
     6181 acgtacctct ggacgcgctt gagcgtattc atcgtcataa aaccggcgca ttgattcgcg
     6241 ccgccgttcg ccttggtgca ttaagcgccg gagataaagg gcgtcgtgct ctgccagtac
     6301 tcgacaagta cgcagagagc atcggccttg ccttccaggt tcaggatgac atcctggatg
     6361 tggtaggaga tactgcaacg ttgggaaaac gccagggtgc cgaccagcaa cttggtaaaa
     6421 gtacctaccc tgcacttctg ggtcttgagc aagcccggaa gaaagcccgg gatctgatcg
     6481 acgatgcccg tcagtcgctg aaacaactgg ctgaacaatc actcgatacc tcggcactgg
     6541 aagcgctagc ggactacatc atccagcgta ataaataaac aataagtatt aataggcccc
     6601 tgatgagttt tgatattgcc aaatacccga ccctggcact ggtcgactcc acccaggagt
     6661 tacgactgtt gccgaaagag agtttaccga aactctgcga cgaactgcgc cgctatttac
     6721 tcgacagcgt gagccgttcc agcgggcact tcgcctccgg gctgggcacg gtcgaactga
     6781 ccgtggcgct gcactatgtc tacaacaccc cgtttgacca attgatttgg gatgtggggc
     6841 atcaggctta tccgcataaa attttgaccg gacgccgcga caaaatcggc accatccgtc
     6901 agaaaggcgg cctgcacccg ttcccgtggc gcggcgaaag cgaatatgac gtattaagcg
     6961 tcgggcattc atcaacctcc atcagtgccg gaattggtat tgcggttgct gccgagaaag
     7021 aaggcaaaaa tcgccgcacc gtctgtgtca ttggcgatgg cgcgattacc gctggcatgg
     7081 cgtttgaagc gatgaatcac gcgggcgata tccgtcctga tatgctggtg gtcctcaacg
     7141 acaatgaaat gtcgatttcc gaaaatgtcg gcgcgctcaa taaccatctg gcacagctgc
     7201 tttccggtaa gctttactct tcgctgcgcg aaggcgggaa aaaagttttc tctggcgttc
     7261 cgccaattaa agagctgctc aaacgtaccg aagaacatat taaaggcatg gtagtgcctg
     7321 gcacgttgtt tgaagagctg ggctttaact acatcggccc ggttgacggt cacgatgtgc
     7381 tggggcttat caccacgctg aagaacatgc gcgacctgaa aggcccgcag ttcctgcata
     7441 tcatgaccaa aaaaggtcgt ggttatgaac cggcagaaaa agaccccatc actttccacg
     7501 ccgtgcctaa atttgatccc tccagcggtt gtttgccgaa aagtagcggc ggtttgccga
     7561 gctattcaaa aatctttggc gactggttgt gcgaaacggc agcgaaagac aacaagctga
     7621 tggcgattac tccggcgatg cgtgaaggtt ccggcatggt cgagttttca cgtaaattcc
     7681 cggatcgtta cttcgacgtg gcaatcgccg agcaacacgc ggtgaccttt gccgccggtc
     7741 tggcgattgg tgggtacaaa cccattgtcg cgatttactc cactttcctg caacgcgcct
     7801 atgatcaggt gctgcatgac gtggcgattc aaaagctccc ggtcctgttc gccatcgacc
     7861 gcgcgggcat tgttggtgct gacggtcaaa cccatcaggg cgcttttgac ctctcttacc
     7921 tgcgctgtat accggaaatg gtcattatga ccccgagcga tgaaaacgaa tgtcgccaga
     7981 tgctctatac cggctatcac tataacgacg gcccgtccgc ggtgcgctac ccgcgcggta
     8041 acgcggttgg cgtggaactg acgccgctgg aaaaactgcc aattggcaaa ggcattgtga
     8101 agcgtcgtgg cgagaaactg gcgatcctta actttggtac gctgatgcca gacgcggcga
     8161 aagtcgctga atcgctgaac gctacgctgg tcgatatgcg ttttgtgaaa ccgcttgatg
     8221 aagcgttaat tctggaaatg gccgccagcc atgaagcgct ggtcaccgta gaagaaaacg
     8281 ccattatggg cggcgcaggc agcggcgtga acgaagtgct aatggcccat cgtaaaccag
     8341 tacccgtgct gaacattggc ctgcctgact tctttattcc acaaggaact caggaagaaa
     8401 tgcgcgccga actcggcctc gatgccgccg gtatggaagc caaaatcaag gcctggctgg
     8461 cataatccct actccactcc tgctatgctt aagaaattat tcatggcagg agtggcagca
     8521 tgcaatacaa ccccttagga aaaaccgacc ttcgcgtttc ccgactttgc ctcggctgta
     8581 tgacctttgg cgagccagat cgcggtaatc acgcatggac actgccggaa gagagcagcc
     8641 gtcccatcat taaacgcgcg ctggaaggcg gcataaattt ctttgatacc gccaatagct
     8701 attccgatgg cagcagcgaa gagatcgttg gtcgcgcact gcgggatttc gcccgtcgtg
     8761 aagacgtggt cgttgcgacg aaagtgttcc atcgcgttgg tgatttaccg gaaggattat
     8821 cccgtgcaca aattttgcgc tctatcgacg acagcctgcg ccgtctcggc atggattatg
     8881 tcgatatcct gcaaattcat cgctgggatt acaacacgcc gatcgaagag acgctggaag
     8941 ccctgaacga cgtggtaaaa gccgggaaag cgcgttatat cggcgcgtca tccatgcacg
     9001 cttcgcagtt tgctcaggcc ctgaagctac aaaaacagca cggctgggcg cagtttgtca
     9061 gtatgcagga tcactacaat ctgatttatc gcgaagaaga gcgcgagatg ctgccactgt
     9121 gttatcagga gggcgtggcg gtgattccgt ggagcccgct ggcgcggggg cgactgacgc
     9181 gtccgtgggg agaaactacc gcacgactgg tgtctgatga ggtggggaaa aatctctata
     9241 aagaaagcga tgaaaatgac gcgcagatcg cagagcggtt aacaggcgtc agcgaagaac
     9301 tcggtgcaac acgagcacaa gttgcgctgg cctggttgtt gagtaaaccg ggcattgccg
     9361 caccgattat cggaacttcg cgcgaagaac agcttgatga gctattgaac gcggtggata
     9421 tcactttgaa gccggaacag attgccgaac tggaaacgcc gtataaaccg catccggtcg
     9481 taggatttaa ataagagtcc aggcctgatg agacgcaaca agcgtcacat caggcactgg
     9541 tgcacaacta cgacagaata cccagcggcc agtgatgacc gataaagtac aggatacctg
     9601 cggagatcac cccggcgaca atatcatcga tcatgatccc catgccgcca tgtacattgc
     9661 gatcaaacca gcggatcggc cacggcttcc acatatccag aatacggaaa atcacaaacc
     9721 cggcggcaac ccactgccag tcattggtcg gcagcgccat gagcgtgatc cacataccaa
     9781 taaattcgtc ccagacaatg ctgccgtgat cgtgcacgcc catatctttc gccgtttgat
     9841 gacaaagata gacgccgata cagatcccca acatcaccac cagcgagtag agctgccagg
     9901 gtaaaaaggt catcagatac cagaacggaa tcgctgccag cgatcccatc gtgccaggaa
     9961 cgattgggct taatccactt ccgaatccga cagcaagcag atgccacgga ttactcatct
    10021 tcaggcgact tttcgcgaca tctttatggc gtggcaaaat ggtcatatcc tttccagtca
    10081 aacgtgacag gttcgccgtc acgaataaaa caaagccctt cgatatcggc ggtcatttgc
    10141 ccgatacagg taaacggtac gcccaggtgt ccgagagcca catccagcgc gccacggttc
    10201 agttccggca cagtgaaaca caactcgtaa tcttcaccgc cagagagcgc ccagcgcagc
    10261 gcctgttccg gttcaacatg gcgagaaagc gcatcagaaa acggcagcaa tgccaggtca
    10321 atacgtgcgc cgcagtcgct ggctttcacg atatgcccga gatcggaaat cagaccgtca
    10381 gagagatcga tagctgaatt tgccagatcg cgcagtgcct gtccctgtaa aatacgcggc
    10441 gatggacgga gatgacgttt gatcaagtag tccgcatctt tagcatcggc aacctgcaaa
    10501 cggttttgca aaatcgccag cccggcggcg ctatcgcccg gtgtaccggt cacatagatc
    10561 cagtcacccg gtttcgctcc agagcgcgtt aaggctcgtc ccatcggaac aaagccgtgg
    10621 atacccaacg tcattgataa tggcccacgc gtggtatcgc cgccaatgag ttgcatatcg
    10681 taataattga gaagatcaaa caaactgtcg ctgaaggact caagccacgc ttcgtctacg
    10741 tccggtaagg ttaatgccag cgtcagccag gccggatcgg cccccatcgc tgccagatcg
    10801 cttaggttca ccgccagtgc tttatacgcc agatcagcag gatcgatatc atggaggaag
    10861 tggttgcccg ccaccagcgt atcagtgctg atcgccaggg tctgtttctc ggggatattg
    10921 agaagagcgc aatcgtcgcc gatgcccagt tcgacatcaa gacgagaact tcttacacgg
    10981 tcaaaataac gggcaatcag ggagaactcg ccacatgcca tacgttatgc ctcagcaggt
    11041 aaaaaagaaa aggccggcga tcgcggaacg gtcttccgtg aatctaccgg cctggatatc
    11101 actttttgtt agggcgaatc acaggtgctg ctttatcgag tacgccgttg acgaacttat
    11161 ggctgtcttc tgcgccgaac gatttcgcca gttcgatcgc ttcgttaatg gccactttgt
    11221 atggcacatc gctacgttta gacagctcgt acagcgcaat gcgcagtact gctttttcta
    11281 cctgtcccag ttcttccagc aggcgggaca ggtatggctt catcagtccg tcgaggtatg
    11341 cggtgttagt cgccaccccg gccagcagct cacggaagta caggacgtca acgtctttta
    11401 catcctgttc agccaggaac tggtattcaa catcagcgat gtcgttctgg gacaactgcc
    11461 aggagtagag cgcctggacg gcacactcac gagcgcggcg acgagcagca ggtttcacgg
    11521 atttcccctt actaatttca ggccttgatg gctttcaata cattaatcat ttcaagcgcg
    11581 gtcagtgcag cttctgcacc tttgttgcca gctttggtgc cagcacgttc gatcgcttgt
    11641 tcaatgcttt cagtggtcag aaccccaaaa gcaaccggaa tttcgctgtc ctgggcaaca
    11701 tgcgccaggc cgttgcttgc accaccagcg acatattcaa agtgggcagt gccaccacga
    11761 ataaccgtac ccagcgcaat caccgcgtcg tatttaccgg ttttagccag tgcacccgcc
    11821 gccagcggca gctcataggc accaggcacc caaacaacgg taatgttttc atcttttacc
    11881 tgaccgatac gtttcagtgc gtcaattgca ccttccagca ggctgtcatt gataaagttg
    11941 ttgaaacgcg cgatggtgat ggcgacgcga gcgtccgggg tagcaacgtt agcttcaata
    12001 atgttcattt tcttccttcg ggttcgagta tggccccgca ggggggcgga ttttagcata
    12061 atatttcgtg cgctgcttcc ctttcgagcc gggagatcat gcacccacta aatgcaggca
    12121 aacatccggg cctacatgac gtatctcttt gaatttaaat tggggggcgt cggctaattt
    12181 ctcaagccct ggcagcgtgc ataatccgcg ggcgtcgctg cctaatagtt taggtgcgat
    12241 atagacaatc agctcatcga ctaaacccgc ctgcagcaat gcgccagcga gcgttggccc
    12301 cgcttccacc cagatgctgt taatttgctg tttacccagt tgcatcatca gtacaaccag
    12361 atccagatga cctttatgct ctggaatcag caaggtacgc accgtttccg gccactcact
    12421 agaatcttcc tgcgtacgcg cgaaccaggt ttcgccgggc tgctgcacaa tgcgatgttc
    12481 cggcgtcacg cgattttggc tatcaatcac aatacgtact ggctggcgga gattttgttg
    12541 cgggtagagc gcctgagttt gttcatccag ttcagaccaa cgcactgtta aggctggatc
    12601 atccgccagc accgtggcgc tgctggttaa aatggcatga ctttgtgcgc gctgtcgttg
    12661 tacgtcgcgc cgcgcctgag gcgaagtgat ccactggctt tcgccgctcg ccatcgccgt
    12721 gcggccatca agcgatgcgc caagttttaa ctgaatataa ggaaagccgg tgcgcatccg
    12781 cttgagaaag cctttattca attgctcggc ttcactcatc atcagcccgt ggctgacgtc
    12841 aatgccagcc tgttgcagac ggtaaagtcc acgcccagcg acctgcgggt taggatcttg
    12901 catcgaggca accacgcgcg ctacgccagc ggcgatgagt gcgtcacagc acggtggcgt
    12961 acgaccatga tggctacagg gttcgagtgt gacataggcg gtcgcacctt tggctttttc
    13021 acccgccata cgcaacgcgt gtacttcggc atgtggttca cccgcacgtt ggtggtaacc
    13081 ttcaccgaca atttcgccat ctttgacaat gacgcacccg acattcgggt tgggatgcgt
    13141 ggtaaaacgt cctcgttgcg ccagctttag cgcccgcgcc atgtaatact cgtcctgcac
    13201 ggcttagtcc tccaggcgcg cgatctcttc gccaaattct ttgatatctt cgaaactgcg
    13261 gtagacagag gcaaaacgga tataggcgac tttatcgagc tttttcaatt gctccatcac
    13321 cagattgcca atcatcttgc tcggtacttc gcgctcaccg gtggcgcgca gctgcgattt
    13381 aatatgattg attgccattt cgacgtcatc ggaactcacc ggacgttttt ccagcgcccg
    13441 cagcattccg ctacgcaatt tctcttcatt aaacggttca cgcacgtcgt tgctttttac
    13501 aacacgcggc ataaccagct ccgccacttc aaaggtggtg aaacgttcat tacacaccag
    13561 acactgccga cggcggcgta cggatgaacc ctcgcccacg agacgagagt caattacctt
    13621 agtgtccacg gcgaaacaga atgggcaatg catacggcgt cctgaccagg tggttaacag
    13681 aaatctattt taccctgaac tgacgataca acaaaggcgc aacgcttttg agataaagga
    13741 tcgatgcttt cgctgctttt accctctacc attaggctaa ttgcgacgag aaagggacga
    13801 cctatgaata ctaacgtttt tcgactgctc ctgctgggaa gcctgttcag ccttagcgcc
    13861 tgtgtgcagc agagcgaagt gcgacagatg aaacacagcg tcagcacgct gaaccaggag
    13921 atgacgcaac tcaataaaga aacggtcaaa atcactcagc aaaacaggct gaatgcaaaa
    13981 tccagcagtg gggtttacct tctgcctgga gcgaaaacac cggcaagact ggaaagccag
    14041 atcggtactt tacgtatgtc gctggtgaat attacgcctg atgcagatgg caccaccctg
    14101 acgctacgta ttcagggcga gtcgaatgat cccttgcccg cattcagcgg aactgttgaa
    14161 tatgggcaaa ttcagggaac aatagacaac tttcaggaaa tcaatgtgca gaatcaattg
    14221 attaatgccc ctgccagcgt cctcgccccc agcgatgttg atattccgtt acagctaaag
    14281 ggtatttctg tagaacagtt agacttcgta cgtatccacg atattcaacc tgttatgcag
    14341 taaacgtatt tcggggcgat tttgtgcgtc ccgcaacatc tttccccgtc attttgttac
    14401 tccgcttaca tcacccagat tgatagtaaa agtttgcaac aagggtgaaa gtcagtacaa
    14461 tccctgcccg aatgtgtgta aacgtgaacg caatcgatta cgtaaatgat agaactgtga
    14521 aacgaaacat atttttgtga gcaatgattt ttataatagg ctcctctgta tacgaaatat
    14581 ttagaaacgc aatttgcgcc tttttcactc ccgcaaggga ttttcaaaca gtggcataca
    14641 tatgaaaaaa acattactgg cagccggtgc ggtactggcg ctctcttcgt cttttactgt
    14701 caacgcagct gaaaacgaca aaccgcagta tctttccgac tggtggcacc agagcgttaa
    14761 cgttgtcgga agctatcaca cccgtttcgg accgcagatc cgcaacgata cctaccttga
    14821 gtacgaagca ttcgctaaaa aagactggtt cgacttctat ggttatgcgg atgcgccggt
    14881 attcttcggc ggtaactccg atgctaaagg tatctggaac cacggttctc cgctgtttat
    14941 ggaaatcgaa ccacgtttct ccatcgacaa gctgaccaat actgacctta gcttcggtcc
    15001 gttcaaagag tggtacttcg cgaacaacta catttacgac atgggtcgta ataaagatgg
    15061 tcgccagagc acctggtaca tgggtctggg taccgacatc gatactggtc tgccgatgag
    15121 cctgtccatg aacgtctatg cgaaatacca gtggcagaac tatggcgcag cgaacgaaaa
    15181 cgagtgggac ggttaccgtt tcaaaattaa atactttgtg ccgattaccg atctgtgggg
    15241 cggtcagctg agctacatcg gcttcaccaa cttcgactgg ggttccgatt taggggatga
    15301 cagcggtaac gcaatcaacg gtattaagac ccgtaccaat aactctatcg cttccagcca
    15361 tattctggct ctgaactacg atcactggca ctactctgtc gtagctcgtt actggcacga
    15421 cggtggtcag tggaacgacg atgcagaact gaacttcggc aacggcaact tcaacgttcg
    15481 ctctaccggc tggggtggtt acctggtagt aggttacaac ttctgattat gaaaatgccg
    15541 ggatttattc ccggcatttc agattgttaa caacgtgcgc tttgttcatg ccggatgcgg
    15601 cgtaaacgct ttgtccgacc cacaaaagca cgtaaattca atatattgct gaaataacgt
    15661 agtcctgata agcgtagcgc atcaggcaat tttacgtttt aatcacttct tcttgttcat
    15721 catcgctttc aggtcagcga atgggttgta cttcgcttca ccgacatctt tctgcgcatc
    15781 ttcccctgcg ataacggtcg taccatactg atccgcttcg gtatatttcg aatgctcatg
    15841 atcgtggcaa tagagacaaa gcaattccca gttactgcca tcttccgggt tattggtatg
    15901 gtcgtgatca atgtggtgaa cagtaagttc acgcaggttg gaataaacaa actcgcggga
    15961 acagcgaccg cagacccacg gatatatttt taatgctttt tcgcgatagc cgctttctaa
    16021 ccgcgcatag ttttttggga tgatagccat gaagagttac ctggatgaaa tgtagggtta
    16081 cgcgcagttt cccaagatgc ggggattttc gcaatctcca tacatcaaaa aaaatcccga
    16141 tcttctgacc gggattttca acatcaacgg gaacttgatt acggcagaat tgacggctga
    16201 tccgcccctt ctttttccac tttctgctgc aacatgtgtt cgcgcttcat acccagtttc
    16261 agagccaacg cagatgccac atagatggaa gatgcagtac cgatggaaac accgataagc
    16321 atggtcagcg agaagccttc cagtaccgga ccaccgaaga ggtacagcat caggataacc
    16381 atcaaggtag taccggatgt gatcaaggta cggtgcagcg tctgggtcaa ggacacgtta
    16441 aagatttcgt aaggcgtacc gcgacggatc ttgcggaagt tttcacgaat acggtccgat
    16501 accacgatac tgtcgttaag cgagtaaccg ataaccgaca tcaacgatgc cacaatggtc
    16561 aggtcaatct cgatatggaa taacgacaaa atacccagcg taatgataac gtcgtgcgcc
    16621 agcgcaataa caacccctgc cgccagtcgc cactcaaagc gaaaacctac gtacacaagg
    16681 atagacagca gcgccgccat caacgccatc gcaccggttt gcgcaaggtc tgcccccacg
    16741 ctcggaccga caaactcaat acgcttcact gctgcattct gattggtgga ttcgttaatc
    16801 accttcagaa cctggctgcc cagcacctga ccgccggttt cgccttcagc aggcggcata
    16861 cggaccatga tgtcgtggct gctaccaaag ttttgcagca ttggctcttc aaaaccggct
    16921 ttttgcaatg catcacgcat tacgtcaatt tcagccggtt tttcgagcgt aatttcgata
    16981 accgtaccac cggtgaaatc cagcccccag ttaaagccgc gcacgcccat aataacgata
    17041 gcggcgatta acagcagacc agagatgccg aaagcccagt agtcccagcg cataaagtca
    17101 tagactttac ggccgtggtt tagttgttca acagtatatt cctgtgccac atcgcactcc
    17161 tcagattgac agcttcttga cgcgcttgcc gccatatagc aggtttacga tggcacgcgt
    17221 accgacaatc gcggtaaaca tcgacgtcgc cacaccgata ccggtagtaa tcgcgaaccc
    17281 tttaattgcc ccggtaccca ctgcgtacag gatgatgact ttaatcagcg tggtgatgtt
    17341 cgcatcgaag atagaactga atgcgccacg ataaccttca tcaattgcct gttgaacagt
    17401 acgtccgttg ctcaactctt ctttaatacg ttcgttgatc agtacgttcg catcgaccgc
    17461 taccgcaagg gttaagacga tacccgcgat acctggcata ctcagtgttg cgcctggcaa
    17521 cagcgacata ataccgacga tcaagatcaa gttggcaatc agagcactgg tcgcaatcag
    17581 accaaacttc ttatagaaga tgatcatgaa cagaatagaa accagcagac cggcaaggca
    17641 agcctccagc ccctgctcaa tgttctgcat acccagggtc gggccaattg tacgttcttc
    17701 aacaatctga atcggcgcga tcaacgcacc ggcacgcagc agcagtgaca gctgacgggc
    17761 ttcgttcggg ttgttgatgc cggtgatacg gaagctgtta cccagacgag actggatgtt
    17821 ggcgatgtta atcacctctt cctgtttcac cagaaccgca cgaccatttg catctttctt
    17881 accgctgtct ttgtactcca caaacagggt tgccatcggt ttgccgatgt tgtccttggt
    17941 gaagttagac ataatgttgc caccagcgct atcgagcgag atgttaacct gcggctggtt
    18001 gtattcgtcc tggctggaag tggagtcggt gatatggtca ccggtcagaa ttacgcgttt
    18061 gtacagcaca actggctgac cttcgcgggt ctgtttcact tcagagtcgc ccggtacgcg
    18121 accggatgcc gcagcggcct ggtcaacgtt ggtgtttacc agacggaatt ccagcgttgc
    18181 cgtcgcaccc agaatctctt tcgcacgcgc agtgtcctga atacctggca gttcaacaac
    18241 gatacggtca gcaccctgac gctgaaccac cggctccgcc acgccaagtt ggtttacacg
    18301 gttacgcagg atattgatgt tctgctgcac cgcatattca cgcgcttcac tcagacgagc
    18361 atcgctcatt accgcacgca gctggttgct gccctggctg ctaatcacca ggtccggatg
    18421 gcgcttgctc agatacgcaa tggcttcatc acgagcttta gcatcgcgga aagtaatgct
    18481 caggccgtag ttgttttctt tacgaacggt ggtatacggg atgccctttt cacgcagatc
    18541 gctgcgcagg ctatcgatat tttgttcctg gagtttgcca agcgcggtgt ccatatccac
    18601 ttccatcagg aagtgaacgc cgccacgcag gtcaaggccg agcttcatcg gctcagcgtg
    18661 aatagctgcc agccagcgcg gcgttgccgg ggcaaggtta agcgccacga cgtatttgtc
    18721 acccataacg cccattaatg cttcacgagc gcgcagctgg gtgtcagtgg agtcgaagcg
    18781 cgcaagaata gcgccctctt ccagtgccac agacttagca gttatttttt cttcttgtaa
    18841 cgttttctgg acctggatca gcgtttgctc actggcggcg actccgcgcg caccagtgat
    18901 ctgaacagcc ggatcctcac caaacaggtt gggaagcgca tacagcagac cgatgacaat
    18961 caccacgatc agcatgacgt acttccacaa aggataacgg tttaacacgg caattccctt
    19021 agggaaaaat tttaattaca gcgccttcat ggtgcctttc ggcaggacgg cagctacgaa
    19081 gtcacgttta ataactactt cagtggtgtc attcagcgcg atagcaatgt agccgttttc
    19141 cgctactttg gttacgcgac caaccaggcc accgttcgtc agaacttcat cacctttggc
    19201 aatggagtcc atcagctttt tgtgttcttt ggtgcgcttc tgctgtggac gcaggatcat
    19261 gaaatagaaa atcagaccga ataccaccag catcaaaatc aaagacatcg ggctaccttg
    19321 cgccggtgca cccgttgccg ctaccgcatc agaaataaaa aagctcatta aatttccctc
    19381 attattaata ttaatcaacg ttcaaaggtg gtacttctcg cccctgacgc tggtaaaaat
    19441 cagttacgaa gctctctaat ttaccctctt caatagcctt gcgtaaaccc gccatcaaac
    19501 gctggtagta acgaaggtta tgaatggtgt tgagtcgcgc gcctaatatt tcgttgcaac
    19561 ggtcaagatg atgcaagtaa gcgcgtgaat aattgcgaca ggtgtagcaa tcacactcag
    19621 gatcgagtgg gccagtatcg ctcttatact tcgcattgcg gattttcacc acgccatcgg
    19681 tcacgaacaa atgaccattt cgggcgttgc gggttggcat tacgcagtca aacatatcga
    19741 taccacgacg tacgccttca accaggtctt ctggtttacc aacgcccatc aggtaacgcg
    19801 gtttgtctgc cggaatttgc gggcatacat gctccagaat gcggtgcata tctgctttcg
    19861 gctcacccac agccagaccg ccgacagcgt agccatcaaa accgatatct accagacctt
    19921 taacagaaat atcacgtaaa tcttcgtaaa cgctgccctg aatgatacca aacagcgcat
    19981 ttttgtttcc gagactgtca aaacgctcac ggctacgctt cgcccaacgc agagacatct
    20041 ccatggagcg ttttgcgtaa tcccagtcag caggatacgg cgtacactca tcaaagatca
    20101 tgacgatatc cgaaccaaga tcgtactgaa tctccattga tttttcagga tcgaggaaaa
    20161 tcggatcgcc gttgatcggg ttacggaagt gcacgccctg ttcggtgatt ttacgaatat
    20221 cgccaaggct gaagacctgg aagccgccgg agtcggtgag gatcggcccc ttccactgca
    20281 taaaatcgtg cagatcgccg tgcagtttca tgatttcctg gcccgggcgc agccacaggt
    20341 ggaaggtgtt gccgaggata atttgcgcgc cagtggcttc aacttcttcc ggcgtcatcc
    20401 cttttacggt gccgtaggtg ccaacaggca taaaacaagg cgtttccact acgccacgat
    20461 caaagaccag gcggccacgg cgtgcgcgac cgtcggtggt gtccagttca aatttcattt
    20521 tttctccact acgtcagaaa aacagtccaa cgttttaaac cagcgccgcg gaattactcc
    20581 ccgacgcgct cattaattgc ctgcggattg tacgtgataa acatcgcatc accgtaacta
    20641 aaaaagcgat atttctcttc taccgctgct ttataggcat tcatggtgtg ttgataaccg
    20701 gcaaaggccg aaaccagcat aatcagcgtc gattccggca ggtggaagtt tgtcaccagc
    20761 gcatcgacca ctttgtactg gaagcccgga tagataaaga tttgggtatc gtcaaagaac
    20821 ggttcgataa gatcgttttt cgccgcctga gccgcgcttt ccagcgaacg tactgaggtg
    20881 gtgccaaccg caatcacccg gttaccgcgc gctttcgccg ccagtaccgc gtctaccaca
    20941 tcctgcggca cttcagcgta ttccgagtgc atgatgtgat cttcaatggt gtcgacgcgc
    21001 accggctgga aggtgcccgc accaacgtgc aacgtcacaa acgccatctc cacgcctttg
    21061 gcgcgtaatt tttccagcaa aggttcgtca aaatgcagac ctgcggtcgg ggctgcaacc
    21121 gcgcccggtt tttcgctata aacggtttga taaagttcgc ggtcagcgtc ttcgtccgga
    21181 cggtcgatat acggcggcag cggcatatgg ccgatgctgt tgagaatatc cagcaccgag
    21241 cgttcatcat taaattcgac ttcaaacagt gcgccgtggc gcgcggtcat tgttgcgtta
    21301 atactttcgt catcgcccag cagcagttct gcgccaggtt ttggcgcttt cgaggcgcga
    21361 atatgcgcaa gaatgcgttt gtcgtcgagc atccgttcaa ccagcacttc aatcttgccg
    21421 ccgctggctt tacgcccaaa caggcgcgcc gggatcacgc gggtattatt aaaaaccaga
    21481 agatcgccgg ggttgagctt atcaagtaaa tcggtgaaag taccgtgcgt cagcgcgccc
    21541 gtcggcccgt ccagcgacag taaacgacag ctactgcgtt caggcatggg atagtgggca
    21601 atcagggatt cgggcaattc aaaggagaaa tcggtaacgc gcatgacact gactcagact
    21661 aaaataagag gcgggtagtc tagtgccggg gcgctctccc tgcaaccttt accccctttt
    21721 ggatagaata taatcgatga attttttagc tcacctgcat ttagcccatc tcgcggaaag
    21781 ctcgctttcc ggcaatttac tggctgattt cgtacgcgga aatcctgaag aaagttttcc
    21841 gcccgacgtc gtggctggca ttcatatgca tcgacgtatc gacgtattaa ccgacaatct
    21901 gccggaagtc cgcgaagcac gggaatggtt tcgtagtgaa actcgccgcg ttgcgcctat
    21961 tacgctggat gtcatgtggg atcactttct ttcccgccac tggtcgcagc tgtcgccgga
    22021 ctttccgcta caggaatttg tctgttatgc ccgcgagcaa gtgatgacga ttttgccgga
    22081 ctcaccgcca cgttttatca atctgaacaa ttacttgtgg tcagagcagt ggctggtgcg
    22141 ctatcgcgat atggatttca tccagaacgt gttaaacggc atggcaagcc gccgcccacg
    22201 tctggatgcc ctgcgtgact cctggtacga tttagacgct cattatgacg ccctcgaaac
    22261 ccgcttctgg cagttttatc cgcggatgat ggcgcaggcg tcacacaagg cgttataaaa
    22321 cgttagttca tccataccgt agccgaaatg gcaggcaaag ccagaatccc gtcagtcagt
    22381 tgcccatgcc cttctttgca ttgccattgc acggcattga gcaacggtga cgcgggtagc
    22441 acgacttcac aagcttcgcc acggttgatt gccaccagta cacgctgctg attcagcacg
    22501 cggacaaata ccaccacgtt atcttccgca tacagcacct gacagccgcc atgacgtagc
    22561 gcctgacttt tcttacgcag cgcaatcatt cgctggtaca gcgcgaataa cgccgtatcc
    22621 tgcttttcca cctgccaggg gaacggttta cggcaaaacg gatcgttttt gccatccagt
    22681 cctacttcat caccgtaata aatgcacggt acaccaggcc aggtgaacag ccagaccacc
    22741 gccagcagca ggcgcgcaat atcccgaccg agcagcgttt taaatcgcgc agtatcgtgg
    22801 ctgtcgagct gattaaacat acgtaattgt tgttgatgag aaagccctgc gcggtaatta
    22861 tccatccagg ccatacaggt ttgggcatca atttgctgcg gatcgtaaga gatatcggta
    22921 ttggcaagaa atccccacaa cgggaatgtg aagccacgat agttcatggc ggcatcttcc
    22981 acatcggcct gtaaccattg ccgtgcatcg ccaaaatgtt cgccgacaat atacgcttcc
    23041 ggctgggttt ctttcgccgc ttcggtgatc ccagcaacgt gctgcatatt attgcgcgcc
    23101 ccacccgcct cccccagcat atgcaccaca tccagccgcc agccgtccat actccacggc
    23161 gctttcagcc aatggcggac aatactgtct tccccgcgat aaatttcatt caccagactt
    23221 tccgactgat aatccagctt cggcaagctg gcatagccaa gccagtcgag cgccgtgcca
    23281 tcatcactaa acgagtacca gtcgcgccag ggcgattcag ggttgtgaca agctcccccc
    23341 gtgccacgat tgtgcctgtc aaaccaggca tgggaatcgc cactgtggtt aaacacgccg
    23401 tccagcacca gccgcattcc cagctgctgc gtattgtgtc gcaaacgcag caacgcccca
    23461 tcaccgccaa actgcggatc gacatggcga taatcctcgg tatcgtattt atgtacgctg
    23521 ggagctttaa acaccggatt gagatacagc gccgtcacgc caagcttttt cagatacggc
    23581 agtttttcgc ttatcccgtc cagatcgccg ccatagaacg ttgatccgcc cgcctgcgcc
    23641 gtgaccggtt catcccagtc acgcaagatg atctcttgtc cggctgcatg atggtaatag
    23701 acatgatcct gttcagcttc acgaggaaga ctacgcgcaa aacgatcagg gaagatctga
    23761 taaaaaatct gatccgcagc ccattgtggg ccgatatccg gtacatcgac ggcaaactgc
    23821 tccagtcgtg ccggcggcat tcggctgaag ccctgcggtg taaaccaacg ctggcgatcg
    23881 tgccacagca gtttgaaact gtaacgccgc cggggttgtc cgctggagag atcaatcgcc
    23941 gcacgccatg cggtgacgcc aggctgctgc tgactgcgct gcttatgcat cgatactgac
    24001 atttcttcgt tatcgtgttc tgtacgcagc ataatgcgct gcggtgggtc ttcgcccgtc
    24061 agccacagtg taatgagcag ttgatctttg ctttgtttaa caaatggggg caccggcagg
    24121 tgccatgcat ttaacatcat aattcccctg tgatgaaaat ctgatcacct tgccatagcc
    24181 taatgcagga tcactcatca tctgaaggat atttggggga ggaggacggg ggcggataac
    24241 tttcggaata gccggatcag gatttcctcc tgaaccggct tacagaacgc aagtattatt
    24301 ggttttcagc cagctgacga tcgtggcggc gtttaaacat ccagccaatc aacagcacaa
    24361 caatccacgc gaaaccgaca tacagcgaga tacgcgtatc cgggtgataa ccaatcaacc
    24421 cgataataaa gagcaggaaa atcagcccgc cgatggtcgt tgctacccca cccggcactt
    24481 taaatttcag cgccttaact tcttctggcg gcaaacggcg acggaaggca atttgcgaca
    24541 gcaggatcat aatccacacc cacaccgtgg cgaaggttgc cagcgaagcg atcaccagga
    24601 agacgttttc cggcatgatg tagttcagat acaccgcaaa cagcagcgcg gtagtcatca
    24661 ccagcaccgt aacccacgga ataccgcgac gcgacgtttt gctgaaaatt ttcggcgcgc
    24721 tgccctgctc tgccataccg tggagcatac ggcctacgcc aaatacatca ctgttaattg
    24781 ccgacagcga agcagtcagc acaacaaagt taagaatgct ggcggcaaag gtaatgccca
    24841 tatgctggaa cgtcagcacg aacgggctac cggcagtgcc aacctgattc cacgggtaga
    24901 tagacataat gacgaacagc gtaccgacgt agaacaccag aatacgcatc ggcacggagt
    24961 taatcgcacg cggtatcgat ttctcaggat ctttcgcttc accggcggta atcccgataa
    25021 tttcgatccc accgtaagca aacatcacca tttgcaacga catcaccatc ccaagccagc
    25081 cgttactgaa gaagccgccg ttgctccaca ggttatgaat accggtcggt tgcccgccgt
    25141 tgccaatccc ccagatgatg atgccgaaac cggcgacaat catgatgatg atggtggcga
    25201 ctttaaagaa cgagaaccag aattccagct caccgaagac cttcacgctc atcaggttta
    25261 cggcgcaaat gatcagcacc acgctcagta cccaaatcca gtgcggcacc gtcgggaacc
    25321 agacacccat atagatacca aaagcggtca catcggcgat ggcgacaata aggatttcaa
    25381 agcaataggt ccagccggta atgtaacctg ccagcgggcc gaggttttcc tgcgcataac
    25441 gcgagaaaga gctggctgcc gggttatgta ccgacatttc ccccagcgca cgcataatga
    25501 tatacgccgc gataccaccg ataatatagg ccaacaacac gctcggaccg gccattttga
    25561 tggcgtctgc cgaaccgtaa aacagcccgg tgccaattgc tgaacccagt gccataaagc
    25621 gtatgtggcg ggtacttagc ccacgcttta gcttgttctt actttccatc aattcctaac
    25681 ccatcaacac aataaaaaac cacggggcat cgcagccccg tggttaaaac aaatgttcag
    25741 tgatttagtg agcgctggag gtcacctgac gacctgccgc gcgatcccag ataatggcca
    25801 gaaccaccat caccactgtt ggcattaacc acgccagacc ttgttcggcc agcggtaaac
    25861 gctgcgccca ggacggtaag atatcgctga atgcagatgc tttgatcccg tcgagaatac
    25921 caaaaagcag gctgataaac atcggcggag caatcacgcg ggacgaatta tgccaccatg
    25981 agcgtgtaaa acttaataca accagtgcga tacacggcgg ataaatagcg gtcagcaccg
    26041 gtacggagat ctggatcagc tggcttaagc cgaggttaga aaccaccatc gagaagccgc
    26101 cgaggataaa caccagcgta cgataagaga gcggtacgta ctgggcaaag aattctgcac
    26161 aagcacaggt caggccaact gccgttacca ggcaggcgat gaagattaac gccgccagca
    26221 ggaagctacc gccgccgcca aaggtgtgct gaacgtaagc atgcagaata gcagcgccgt
    26281 ttgcagactg atcgaccagc gacgcgctgt ctgaacccag acggaacagc gccaggtaca
    26341 gcagagtcag accaacaccc gccatcaggc cagcccagac ggtataacgg gtcagcagac
    26401 gcgcttcggt aacgccacga gaacgcgccg cgttaacaat aacgatacca aacaccattg
    26461 cgcccagcgt atccatggtc agatagccgt taacgaagcc gttagaaaac gcagcgtttt
    26521 gataagcctc agtcgccgtg ctgatagaac ccgccggcca gacaatcgcg gcaacagaca
    26581 ggatgaccag cgcgataatt ttcagcggcg caaggaagtt gcccacggta tccagcagct
    26641 tgcccggata gagcgaaacc agaataacga tagcgaaata gaccaggctg tagataaaca
    26701 gcggcagcgc ggaatcacca gtcagcggcg caatccccac ttcaaaggaa acggtagctg
    26761 tacgcggcgt agcgaaaagc ggccccaccg ccaggtaaca aaccgttgcc agcagtacgc
    26821 cagcgacttt accgattggc gtgctgaggc tgtcaacacc gccgccaact tttgccagcg
    26881 ccactaccgt tagtaccggc agaccaacgg cagtaatgag gaagccgaat gccgcagtcc
    26941 agacgtgttc gcctgcctgc aagccgacca ttggagggaa aataatgtta cctgcgccga
    27001 cgaacaacgc aaatgtcata aagcccagag cgatgatatc gcgcgatctt aattgatggg
    27061 tcataaatca tactgcctgt ggatgtggtg ttgtaacgtt aaatttttgt gccaatccct
    27121 ggggatgata cagcggtata tttaaacaat tttagcggga aatactccca accaggcgcg
    27181 gcgaagaata gtttttcgat ttaccgcgtt aatgcagtca gtatgacagc acctgaagcg
    27241 caatttaaac gcttataacg ttttaaagca aggagggatc taaaaaccag aggtatatag
    27301 cgataagaaa tcaccaacca gtataaaaca ctatttccgt gaaaaagaca tggctaatca
    27361 tgcgaacaaa aaatcaccaa ccgttgtaaa atctaacgcc cgtattttga ctgcaaagaa
    27421 aataagccag catcggctgg cttatggcaa taaaagatga caaaggcgga ttaatcgctg
    27481 tttttggcaa ttaaacgttc cgggataaca aaactgaaac gtgttccttt tcctactgta
    27541 ctctcaatat tcaggcgact ttcgtgatga ttcaccgcat gtttcacgat cgctaaccct
    27601 aatccgctac cgccggtttg ccgggaacgc gctttatcaa cgcgataaaa acgctcggtc
    27661 aggcgcggaa tatgctccgg tgcaatgccc ggtccgttat cttcaacgct aaattcggca
    27721 ccgtgcggca ctcgctgcca gcgtacggtg atatgcgtgc cttctggagt atgattcacg
    27781 gcgttataga ccaggttcga aatcgcactg cgtagctgat cttcgttgcc agacactttg
    27841 aggccgttat ctatctcaaa ggtaaatgtc tgttttttct gactcagagt ctgagcctca
    27901 cgctcaacaa cgcgcagcat catcggcaca tcaacctttt cattgagcaa atgcgtcggt
    27961 gcggcttcta ttttcgacag cgtcagcaac tgcttcacca gcccttccat ccgctgggtc
    28021 tgctcgcgca tggtgtgcaa cgctttttcg cgtaccgcgc cttccagcgg ctgctcatcc
    28081 atcatctcca ggtaaccctg taacacggtc aatggcgtgc gtaactcatg gctcacgttg
    28141 gcaaaaaagt tacgccgcgc cccttccagt tgatgcattt gcgtgacatc acgcgccacc
    28201 atcagcaact gtttgtgggt ataaggcatg acgcgaattt ccagatgccg cccggtgttg
    28261 agcaccagat tgagcgggcg agaaaaatca cgcgttttca gatattgcgt aaactccggg
    28321 taacgcagta ggttaaggat gttctgcccg ttatcttccg gccagcgcaa accaagaatt
    28381 tgttgcgcca gaccgttaca ccagaaaata ccgccctctt ccgtggtcag caccaccgcg
    28441 tcgggcagcg actccgcgcc gctacgaaag cgtttaatca gattgcccag ttcacggcgg
    28501 cgttttttat ttcgcagctg catctggtgt aagccgtata gtagcggttc ccagctacca
    28561 cgccccggtg gcggggtcat actgcgatcc acccacagcc accatgaaag gcgcaataaa
    28621 ttccagaaat gccagataag cagtcctgtt accgatgcca gcaaaaacca gggcaggtaa
    28681 ccaaaaaatg cacccaggat gaaagccggg aggcagcaaa gtagcagctc cagcaccagc
    28741 cttttccacg acagccgttc cagcacgtaa gatactccag ttaagaaatc ataagccctg
    28801 ctctgcgtcc gatgagcaag gcgttaaaag cgggttgaaa aacgatatcc tgtaccgcgc
    28861 acggtctgca ccatgcggtc atgcccgccg ggctccagtg ctttacgcag gcgacgaatg
    28921 tggacatcga ccgtgcggtc ttccacatac acgttagttc cccagacgtg gtttaacagc
    28981 tgctcgcggc tgtacacgcg ctcaggatgc gtcataaaaa agtgcagcag tttaaattct
    29041 gtcggcccca tctccagcgg ctcttcgccc gccatcactc ggtgagatgt cgggtcgaga
    29101 cttaatccct gcatctcaat cacctcttcc accgccattg gcgaaatacg gcgcattacc
    29161 gctttgattc gcgccaccag ctccttcggc gaaaacggct tggtgatata gtcatccgcg
    29221 ccggtttcaa ggccgcgcac gcgatcttct tcttcccctc tggcggtcaa catcaccact
    29281 ggaatatccc gggtcatcga ctcgcgcttg aggtgtttga tgaactggat accggagccg
    29341 ccaggtaaca tccagtcaag gagaattaaa tccggccagg gttcattcag ttgattcaca
    29401 gcactgtcat aatcttccgc ttcgaccggc tgaaagccat tttgttcgag cacgaagcag
    29461 accatttcgc gaattggagc ttcatcttct acgaccagaa tacgtctcgc catgatttgc
    29521 cctgttgtaa taaataggtt gcgatcatta atgcgacgtc attatgcgtc agatttatga
    29581 cagatttatg aaaagctcgt cgcacatatc ttcaggttat tgatttccgt ggcgcagaaa
    29641 aaagcaaatg gcacatctgt ttgggtataa tcgcgcccat gctttttcgc cagggaatcg
    29701 ttatgcgcat ccttcacacc tcagactggc atctcggcca gaacttctac agtaaaagcc
    29761 gcgaagctga acatcaggct tttcttgact ggctgctgga aacagcacaa acccatcagg
    29821 tggatgcgat tattgttgct ggtgatgttt tcgataccgg ctcgccgccc agttacgccc
    29881 gcacgttata caaccgtttt gttgtcaatt tacagcaaac tggctgtcat ctggtggtac
    29941 tggcaggaaa ccatgactcg gtcgccacgc tgaatgaatc gcgcgatatc atggcgttcc
    30001 tcaatacgac cgtggtcgcc agcgccggac atgcgccgca aatcttgcct cgtcgcgacg
    30061 ggacgccagg cgcagtgctg tgccccattc cgtttttacg tccgcgtgac attattacca
    30121 gccaggcggg gcttaacggt attgaaaaac agcagcattt actggcagcg attaccgatt
    30181 attaccaaca acaatatgcc gatgcctgca aactgcgcgg cgatcagcct ctgcccatca
    30241 tcgccacggg acacttaacg accgtgggtg ccagtaaaag tgacgccgtg cgtgacattt
    30301 atattggcac gctggacgcg tttccagcac aaaactttcc accagccgac tacatcgcgc
    30361 tcgggcatat tcaccgcgca cagattattg gcggcatgga acatgttcgc tattgcggct
    30421 ctcccattcc actgagtttt gatgaatgcg gaaagagtaa atatgtccat ctggtgacat
    30481 tttcaaacgg caaattagag agcgtggaaa acctgaacgt accggtaacg caacccatgg
    30541 cggtgctgaa aggcgatctg gcgtcgatta ccgcacagct ggaacagtgg cgcgatgtat
    30601 cacaggagcc gcctgtctgg ctggatatcg aaatcactac tgatgagtat ctgcatgata
    30661 ttcagcgcaa aatccaggca ttaaccgaat cattgcctgt tgaagtattg ctggtacgcc
    30721 ggagtcgtga acagcgcgag cgtgtgttag ccagccaaca gcgtgaaacc ctcagcgaac
    30781 tcagcgtcga agaggtgttc aatcgccgtc tggcactgga agaactggat gaatcgcagc
    30841 agcaacgtct gcagcatctt ttcaccacga cgttgcatac cctcgccgga gaacacgaag
    30901 catgaaaatt ctcagcctgc gcctgaaaaa cctgaactca ttaaaaggcg aatggaagat
    30961 tgatttcacc cgcgagccgt tcgccagcaa cgggctgttt gctattaccg gcccaacagg
    31021 tgcggggaaa accaccctgc tggacgccat ttgtctggcg ctgtatcacg aaactccgcg
    31081 tctctctaac gtttcacaat cgcaaaatga tctcatgacc cgcgataccg ccgaatgtct
    31141 ggcggaggtg gagtttgaag tgaaaggtga agcgtaccgt gcattctgga gccagaatcg
    31201 ggcgcgtaac caacccgacg gtaatttgca ggtgccacgc gtagagctgg cgcgctgcgc
    31261 cgacggcaaa attctcgccg acaaagtgaa agataagctg gaactgacag cgacgttaac
    31321 cgggctggat tacgggcgct tcacccgttc gatgctgctt tcgcaggggc aatttgctgc
    31381 cttcctgaat gccaaaccca aagaacgcgc ggaattgctc gaggagttaa ccggcactga
    31441 aatctacggg caaatctcgg cgatggtttt tgagcagcac aaatcggccc gcacagagct
    31501 ggagaagctg caagcgcagg ccagcggcgt cgcgttgctc acgccggaac aagtgcaatc
    31561 gctgacagcg agtttgcagg tacttactga cgaagaaaaa cagttactta ccgcgcagca
    31621 gcaagaacaa caatcactaa actggttaac gcatctggac gaattgcagc aagaagccag
    31681 ccgccgtcag caggccttgc aacaggcgtt agccgaagaa gaaaaagcgc aacctcaact
    31741 ggcggcgctc agtctggcac aaccggcacg aaatcttcgt ccgcactggg aacgcatcgc
    31801 agaacacagc gcggcgctgg cgcatactcg ccagcagatt gaagaagtaa atactcgctt
    31861 acagagcaca atggcgcttc gcgcgagcat tcgccaccac gcggcgaatc agtcagcaga
    31921 attacagcag cagcaacaaa gcctgaatac ctggttacag gaacacgacc gcttccgtca
    31981 gtggaacaac gaactggcgg gttggcgtgc gcagttctcc caacaaacca gcgatcgcga
    32041 gcatctgcgg caatggcagc aacagttaac ccatgctgag caaaaactta atacgcttgc
    32101 ggcgatcacg ttgacgttaa ccgccgatga agttgctagc gccctggcgc aacatgccga
    32161 gcaacgccca ctgcgtcagc gcctggtcgc gctgcatggg cagattgttc cccaacaaaa
    32221 acgtctggcg cagttaatgg tcactatcca gaatgtcact ctggaacaga cgcaacgtaa
    32281 tgtcgcactt aacgaaatgc gccagcgtta taaagaaaag acgcagcaac ttgccgatgt
    32341 gaaaaccatt tgcgagcagg aagcgcgcat caaaacgctg gaagcccagc gtgcacagtt
    32401 acaggcgggt cagccttgtc cactttgtgg ttccaccagc catccggcgg tcgaggcgta
    32461 tcaggcgctg gagcctggcg ttaatcagtc tcgattactg gcgctggaaa acgaagttaa
    32521 aaagctcggc gaagaaggtg cggcgctgcg cgggcaactg gatgcattaa cgaagcagct
    32581 tcagcgcgat gaaaacgaag cgcaaagcct ccgacaagat gagcaagcac ttactcaaca
    32641 atggcaagcc gtcacggcca gcctcaatat caccttgcag ccacaggacg atattcaacc
    32701 gtggctggat gcacaagata agcacgaacg ccagctgcgg ttactcagcc aacgacatga
    32761 attacaaggg cagattgccg cgcataatca gcaaattatc cagtatcaac agcaaattga
    32821 acaacgccag cagcagctct taacggcatt ggcgggttat gcactgacat tgccacagga
    32881 agatgaagaa gagagctggt tggcgacacg tcagcaagaa gcgcagagct ggcagcaacg
    32941 ccagaacgaa ttaaccgcgc tgcaaaaccg tattcagcag ctgacgccga ttctggaaac
    33001 gttgccgcaa agtgatgatc tcccgcacag cgaagaaact gtggcgctgg ataactggcg
    33061 gcaggttcat gaacaatgtc tcgcattaca cagccagcag cagacgttac agcaacagga
    33121 tgttctggcg gcgcaaagtc tgcaaaaagc ccaggcgcag tttgacaccg cgctacaggc
    33181 cagcgtcttt gacgatcagc aggcgttcct tgcggcgcta atggatgaac aaacactaac
    33241 gcagctggaa cagctcaagc agaatctgga aaaccagcgc cgtcaggcgc aaacgctggt
    33301 cactcagaca gcagaaacgc tggcacagca tcaacaacac cgacctgacg ggttggctct
    33361 cactgtgacg gtggagcaga ttcagcaaga gttagcgcaa actcaccaaa agttgcgtga
    33421 aaacaccacg agtcaaggcg agattcgcca gcagctgaag caggatgcag ataaccgtca
    33481 gcaacaacaa accttaatgc agcaaattgc tcaaatgacg cagcaggttg aggactgggg
    33541 atatctgaat tcgctaatag gttccaaaga gggcgataaa ttccgcaagt ttgcccaggg
    33601 gctgacgctg gataatttag tccatctcgc taatcagcaa cttacccggc tgcacgggcg
    33661 ctatctgtta cagcgcaaag ccagcgaggc gctggaagtc gaggttgttg atacctggca
    33721 ggcagatgcg gtacgcgata cccgtaccct ttccggcggc gaaagtttcc tcgttagtct
    33781 ggcgctggcg ctggcgcttt cggatctggt cagccataaa acacgtattg actcgctgtt
    33841 ccttgatgaa ggttttggca cgctggatag cgaaacgctg gataccgccc ttgatgcgct
    33901 ggatgccctg aacgccagtg gcaaaaccat cggtgtgatt agccacgtag aagcgatgaa
    33961 agagcgtatt ccggtgcaga tcaaagtgaa aaagatcaac ggcctgggct acagcaaact
    34021 ggaaagtacg tttgcagtga aataactatt cagcaggata atgaatacag aggggcgaat
    34081 tatctcttgg ccttgctggt cgttatcctg caagctatca ctttattggc tacggtgatt
    34141 ggtagccgtt ctggtggttg tgatggtggt atgaaaaaag tcattttatc tttggctctg
    34201 ggcacgtttg gtttggggat ggccgaattt ggcattatgg gcgtgctcac ggagctggcg
    34261 cataacgtag gaatttcgat tcctgctgcc gggcatatga tctcgtatta tgcactgggg
    34321 gtggtggtcg gtgcgccaat catcgcactc ttttccagcc gctactcact caaacatatc
    34381 ttgttgtttc tggtggcgtt gtgcgtcatt ggcaacgcca tgttcacgct ctcttcgtct
    34441 tacctgatgc tcgccattgg tcggctggta tccggctttc cgcatggcgc attttttggc
    34501 gtcggagcga tcgtgttatc aaaaattatc aaacccggaa aagtcaccgc cgccgtggcg
    34561 gggatggttt ccgggatgac agtcgccaat ttgctgggca ttccgctggg aacgtattta
    34621 agtcaggaat ttagctggcg ttacaccttt ttattgatcg ctgtttttaa tattgcggtg
    34681 atggcatcgg tctatttttg ggtgccggat attcgcgacg aggcgaaagg aaagctgcgc
    34741 gaacaatttc actttttgcg cagcccggcc ccgtggttaa ttttcgccgc caccatgttt
    34801 ggcaacgcag gtgtgtttgc ctggttcagc tacgtaaagc catacatgat gtttatttcc
    34861 ggtttttcgg aaacggcgat gacctttatt atgatgttag ttgggctagg gatggtgctg
    34921 ggaaatatgc taagtggcag gatttcagga cgttattcac cactgcgcat tgcagcagtg
    34981 actgacttta taattgtact ggcactgctg atgctctttt tctgcggcgg catgaaaaca
    35041 acgtcgctta tttttgcttt tatttgttgc gcgggattat ttgccctttc agcaccgcta
    35101 caaatattgt tactacaaaa cgccaaaggc ggagagttat taggtgccgc aggtgggcaa
    35161 atagcgttta acctcggtag cgccgtcggc gcatattgcg gtggtatgat gctgacgctg
    35221 gggctggcat ataattacgt ggcgctgcct gccgccctgc tttcgtttgc tgcgatgtcg
    35281 tcgttgctgc tgtatggtcg ctataagcgc cagcaagcgg cggatactcc ggtgctggcg
    35341 aaaccactgg ggtaggttat agtctcggtg ctcattactt attgccggat gcggcgtgaa
    35401 cgccttatcc gccctacgcg gttctggcac attttgcagg cctgataaga cgcggcaagc
    35461 gtcgcatcag gcatgatgcg ccaattgcct acgtttttta ctcttgtggc cataaccacg
    35521 cagcgccgcg tacgccgctg gaatcaccgt gcttcgcctt acgcaccggc gtttcacatt
    35581 cgccgccgaa gacaaattgt ttaatcaact gcccaaccgt ttgatataaa cggtctacat
    35641 tgctcatccc gccccccagg acaattacat ccggatcgag aatattcacg acatgtgcca
    35701 gcgattttgc cagccgcagc tcgtagcgac gcaatgccag ttccgctacc ggatcgcttt
    35761 cttcaaccag gctgataatt tcactgcctt tcagcgcatg tccgctcaaa cgacgataat
    35821 ctgtggcaaa tcccgtgccc gaaataaagg tttcaataca accttgttta ccgcaataac
    35881 aagggacttc ctcgcgataa cgcagttcgt cttcgtccat ccacggtagc ggattgtgtc
    35941 cccactcacc tgccgtgcca ttgccgccga tatgcgcccg cccattgaat gccacgcccg
    36001 cgccgcatcc cgtgccgata atcacggcaa atactgtctg cgctcccgct gccgcgccat
    36061 ctactgcttc tgaaaccgcc agacagttgg cgtcatttgc cagccgcact tcccgctgca
    36121 acctcgcgct taagtcttta tcgaatggct gaccgttgag ccaggttgaa ttggcattct
    36181 taaccacacc ggtgtaaggc gaaattgagc caggaatgcc catacctacc gttccgcgct
    36241 gccctgtcgc ctgctccgcc atatcaacca acgtggcgat cgtttcaata gtctgccggt
    36301 aatcatcacg cggcgtgggc agacgatggc ggtacaactg ctcccctgca tcgcccagtg
    36361 caatcacttc agttttggtg ccgcctaaat cgatacctat acgcacggta ctctccttat
    36421 ttttttcaat atcaatagcg tagagacgga caaccggatt ggcaatgcaa ggccgccgac
    36481 aattcgttat catgcccgct aaatttaacg acaaggccgt ggaaattatc atgctgtggt
    36541 tcaaaaattt aatggtttac cgtcttagcc gcgagatttc gctgcgtgca gaagagatgg
    36601 aaaaacagct agcctcgatg gcatttaccc catgcggcag ccaggacatg gcgaagatgg
    36661 gctgggttcc tccgatggga tcgcacagcg atgcgttaac gcacgttgcc aatggtcaaa
    36721 ttgttatctg cgcgcgcaaa gaagaaaaaa tcctcccgtc tccggtgatt aaacaggcgc
    36781 tggaagcgaa aatcgccaaa ctggaagcgg aacaggcgcg taagctgaag aaaaccgaaa
    36841 aagattcgct gaaagacgaa gtgctgcact ctctgctgcc gcgtgctttc agccgtttta
    36901 gccagacaat gatgtggatc gacacggtta acggtttgat tatggtggac tgcgccagtg
    36961 ccaaaaaagc ggaagatacg ctggcattac tgcgtaaaag cctggggtcg ttaccggttg
    37021 taccattgag catggaaaac ccgattgaac tgacgctgac cgaatgggtt cgctccggta
    37081 gtgcggcaca gggcttccag ctgcttgatg aagccgagct gaaatcgttg ctggaagatg
    37141 gcggcgtgat ccgcgcgaag aaacaagatc tgaccagcga agagatcacc aatcacattg
    37201 aagccggaaa agtggtgact aaactggcgc tcgactggca gcagcgcatt cagtttgtga
    37261 tgtgcgacga tggttcgctc aagcgtctga agttctgcga cgagctgcgc gatcaaaacg
    37321 aagatatcga ccgtgaagat ttcgcccagc gttttgatgc cgatttcatc ctgatgactg
    37381 gtgaactggc agcgttaatt caaaacctga ttgaaggatt aggtggcgaa gcacaacgtt
    37441 aattgctgat tttcctttaa tgccggatgc gacgcctgcc gcgccttatc cggcgtacga
    37501 agccacacca ggcatataat tattcgctac ggcgggcaat aatttttagc gcagcaatat
    37561 tatgcgtttt atgctgtaac ttgctccatg gacgttgtgt cattgttttt cctcaagcca
    37621 gtgacgcgct tcactgcgat ttttccgcat tgccccggtt ttcactaaat cccgtaacag
    37681 cgaaagatcg ggttgttcga caaataagag taatgatgga tcctctttta accacgtcgt
    37741 tttcacatcg gcagcgagct gtggattatt catagctagc gaccgatgcc gagactcggt
    37801 caatgtcgtt aacaacgacg ccggggtatg tgcgttgcgt aatgccgttt ggcgcaaatg
    37861 atcattgcga ctttgcagca atgcacgcca ccattcatca tctgatttat cttttatcgt
    37921 agccagttcc gcaacaatat ctggagatct tcactgatat ttatatcaac cttgatgaat
    37981 tatgaatata tcggaaattg aaaaaatcga agcaaaggaa atattattat gggttaaaga
    38041 gaggatattt cagaaaaatg ccctcccgtt caaggggaag gcgaggaatt acagatagcg
    38101 gcacagataa gaggtgggtt cggcaacttg cagatgaaac tcactgtgac cgggaacatt
    38161 aaacaccgaa ccggcttcat acacttgcca gtcggtcgcg tcaggcagta acacattcag
    38221 cgcgccactg attaccgtca tctcttccgg ctcagcggtg ctgaaggtgt attcgccttc
    38281 aaccataaca cccacgctgg cgcgaccagt gctgctgctg gaaaagccga ttgatttcac
    38341 tttgccggaa aagtactcat tactttgaag cataaactgg ccctgtttgg tagttgaaca
    38401 tctacttcac tataggggcc agaggcgctg actgtcacgc aaaattacac cagtaattcc
    38461 gcagccagcc gtgcaatcaa tacgttagac agcaagacag gaacatcgag ctgtttttgc
    38521 agtaaatcgc gatgacgttg gtgaaatcct aaacaatcca gcatgatgac atcagcccct
    38581 tttgccagta attctttccc ggcatcaatg attttttgtt ctgaatcatg aatggggtta
    38641 cccaatgaaa ataccggcga tttctgcaaa atttgccatt tttgcgcctg aacgggcagc
    38701 atctcctcaa ccggaacgat aacccccacc tgatgatctt caacaataga ggaaaccagt
    38761 ggaggcaata ttcgcgacgg ctcaagaaag atcgtattac gcgcagtcat actactaatg
    38821 tttgctgtac tcattaataa aatgacgtca taaccctgat tatcgagcac ttcaaccaca
    38881 ccttgcaggt ctcgctccac tttacgacgc gaaacatggg ccagctggtt gtcatttaat
    38941 aatgtgagaa tggtgtcttc gcctgcttct ggcgcgtact ccgccatcac ttcttcacga
    39001 cttaacttcc ccagcaggct atgatgggaa atattatctt cgtcaatgta ttccgtcagg
    39061 agcggcaaaa cctcctgcat aggtacaatg ccgatggtca ggatcgccaa cgacgcactc
    39121 attgttcatc caccttactt ttctttcgtc gttaattacc gggcaagtgt gaagcaccac
    39181 tgctgacact tacttgtgct acaaatgaca aaaagcgtag cagcagacgt gcacggcata
    39241 atgtaaagat tccaaatgat tccagtaatg gattgttatt gtttaatatt ctaattatta
    39301 gaaaaacatg aattatgaaa aatgtgacgc agatcccttg tagtggcact cagaatccct
    39361 tccgagcagt ctgatgcggt cactctttgt cagggtcctc atagcgtttt ttcgcatcca
    39421 tcgcttcctg agccgtcgga tgttcactga tcaacgagtc tggtttagga tgatcggctc
    39481 tgagttggta ccaggttacc gtctgtcctg gctttccttt ttcaatcgtc actatatatg
    39541 cttcacgagg ataaggcggt ttcgttggca tcgttcttcc ttatttcacg ggatgaacgt
    39601 taagtatagg cgctctaaaa tcaacaattg atcgtctgtg ccagggcgct acgaatttca
    39661 gaaatcacct ggctgggttc gtttgttgcg tcgatgataa tatgcgcaac ttcgcgatat
    39721 agcgcatcgc gttcttccag cacttcctga acttcttcgc tcagcggttt tcccgttaag
    39781 gttggccgta aatcttcttc cggtgcagct tgcagtcggt taaccaggac tgatactggc
    39841 gcacacaaat aaaccacgat cccgttattt tgcataaagt gacgattaaa ttccgtcaga
    39901 ataatgccgc cgcctgtagc gataacggtg gatggcgcag ttaccgcttc cagcgccgcc
    39961 gtttctctgg cgcgaaatcc cgcccactct tccctttcga cgatctccgc gaccgtcata
    40021 ttgagctgtg attgcaacca ctgatcggta tcgacaaacc gacggttaag cgaatcggca
    40081 agggccattc cgaccgttgt tttaccacag ccccgaggcc cgatcagaaa aagaggttgt
    40141 gtcatcgtgg gttttcccca ataggtcgca atgcggcgaa agccggtgtc atgagaatag
    40201 cgatcatacc atcaaactag tacaatttcg attgtaaaga aaaaattcca cttaaagtga
    40261 aaatct
//
LOCUS       DAPGWB010000023        39858 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.023, whole genome shotgun sequence.
ACCESSION   DAPGWB010000023 DAPGWB010000000
VERSION     DAPGWB010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 39858)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39858)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39858
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.023"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            4..1251
                     /gene="uidC"
                     /locus_tag="RHX79_001218"
     CDS             4..1251
                     /gene="uidC"
                     /locus_tag="RHX79_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001299087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide uptake porin UidC"
                     /protein_id="HDV2196413.1"
                     /translation="MAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAG
                     AGRDIYAWVQGGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFA
                     LGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTP
                     NIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLG
                     GSVQKDVSNQIQSILEKGIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNDTALVSGQV
                     TWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQ
                     FTLTFAPIVTRGYESSKRDVRIEGAGILGGMNYRVSEGPLQGMNFFLAADKGREKRDG
                     STLGDRLNYWDVKMSIQYDFMLK"
     gene            complement(1296..2804)
                     /locus_tag="RHX79_001219"
     CDS             complement(1296..2804)
                     /locus_tag="RHX79_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HDV2196414.1"
                     /translation="MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQL
                     KLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFP
                     LAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK
                     PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLK
                     TDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQL
                     DYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELY
                     QEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLA
                     QEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFR
                     LTTLQDNTITTSLQYTNGQITLNGQKMPLEDFVGMFAMPALNVPVVPAIPQQ"
     gene            complement(2905..4080)
                     /gene="manA"
                     /locus_tag="RHX79_001220"
     CDS             complement(2905..4080)
                     /gene="manA"
                     /locus_tag="RHX79_001220"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416130.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase"
                     /protein_id="HDV2196415.1"
                     /translation="MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKS
                     SSRVQNAAGDIVSLRDVIESNKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNK
                     RNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQP
                     VAGAHPAIAHFLQQPNAERLSELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIR
                     LISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG
                     LTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETT
                     ISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL"
     gene            4279..5925
                     /gene="fumB"
                     /locus_tag="RHX79_001221"
     CDS             4279..5925
                     /gene="fumB"
                     /locus_tag="RHX79_001221"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fumarate hydratase"
                     /protein_id="HDV2196416.1"
                     /translation="MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAP
                     EALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVL
                     PTCQDTGTAIIVGKKGQRVWTGGGDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKEL
                     LIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIW
                     IEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVG
                     RDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ
                     LQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK"
     gene            6068..7471
                     /gene="fumC"
                     /locus_tag="RHX79_001222"
     CDS             6068..7471
                     /gene="fumC"
                     /locus_tag="RHX79_001222"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDV2196417.1"
                     /translation="MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSL
                     IHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQS
                     NMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL
                     IPQLKTLTQTLSEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYS
                     LPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQ
                     AHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALT
                     MLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIE
                     PNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEF
                     DSWVRPEQMVGSMKAGR"
     gene            complement(7468..8397)
                     /gene="tus"
                     /locus_tag="RHX79_001223"
     CDS             complement(7468..8397)
                     /gene="tus"
                     /locus_tag="RHX79_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication terminus site-binding protein"
                     /protein_id="HDV2196418.1"
                     /translation="MARYDLVDRLNTTFRQMEQELAAFAAHLEQHKLLVARVFSLPEV
                     KKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQV
                     DNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRTLT
                     VLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQD
                     IAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGARVPDVGE
                     LLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD"
     gene            complement(8473..9774)
                     /gene="rstB"
                     /locus_tag="RHX79_001224"
     CDS             complement(8473..9774)
                     /gene="rstB"
                     /locus_tag="RHX79_001224"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310342.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RstB"
                     /protein_id="HDV2196419.1"
                     /translation="MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMN
                     SSLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVA
                     LDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPH
                     WQDMLKLEAAAQRFGDGHLNERIHFDEGSSFERLGIAFNQMADNINALIASKKQLIDG
                     IAHELRTPLVRLRYRLEMSDNLSAAESQALNRDISQLEALIEELLTYARLDRPQNELH
                     LSEPDLPLWLSTHLADIQAVTPDKTVRIKTLAQGHYAALDMRLMERVLDNLLNNALRY
                     CHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLA
                     IVHSIALAMGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA"
     gene            complement(9778..10497)
                     /gene="rstA"
                     /locus_tag="RHX79_001225"
     CDS             complement(9778..10497)
                     /gene="rstA"
                     /locus_tag="RHX79_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416125.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RstA"
                     /protein_id="HDV2196420.1"
                     /translation="MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRE
                     NPDLVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKT
                     TPPAVLLARLRLHLRQNEQATLSKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEI
                     SLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAA
                     EPYRIKTVRNKGYLFAPHAWE"
     gene            10626..10961
                     /locus_tag="RHX79_001226"
     CDS             10626..10961
                     /locus_tag="RHX79_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlpM family protein"
                     /protein_id="HDV2196421.1"
                     /translation="MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHY
                     IVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWV
                     LIICWIKLH"
     gene            complement(10958..11680)
                     /gene="folM"
                     /locus_tag="RHX79_001227"
     CDS             complement(10958..11680)
                     /gene="folM"
                     /locus_tag="RHX79_001227"
                     /EC_number="1.5.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydromonapterin reductase"
                     /protein_id="HDV2196422.1"
                     /translation="MGKAQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAI
                     DGLIKAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGTPLADVL
                     ACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHVAYAASKAALD
                     NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVD
                     YLLTSCFVTGRSFPLDGGRHLR"
     gene            complement(11717..13099)
                     /locus_tag="RHX79_001228"
     CDS             complement(11717..13099)
                     /locus_tag="RHX79_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDV2196423.1"
                     /translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWG
                     ITGAGILLLAYAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY
                     LVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVAT
                     LAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAV
                     VVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEM
                     MGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASL
                     WLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVG
                     ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIA
                     SVPATWMLVG"
     gene            complement(13285..14229)
                     /locus_tag="RHX79_001229"
     CDS             complement(13285..14229)
                     /locus_tag="RHX79_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HDV2196424.1"
                     /translation="MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTG
                     RFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNR
                     VINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDA
                     NQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTA
                     SPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTE
                     VSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK"
     gene            14753..16285
                     /gene="pntA"
                     /locus_tag="RHX79_001230"
     CDS             14753..16285
                     /gene="pntA"
                     /locus_tag="RHX79_001230"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HDV2196425.1"
                     /translation="MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLAS
                     FDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELM
                     QKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA
                     GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE
                     EAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMK
                     AGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNL
                     LKLLCKEKDGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQAAQKAAPEVKTE
                     EKCACSPWRKYALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALH
                     TPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFR
                     KN"
     gene            16296..17684
                     /gene="pntB"
                     /locus_tag="RHX79_001231"
     CDS             16296..17684
                     /gene="pntB"
                     /locus_tag="RHX79_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HDV2196426.1"
                     /translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA
                     LIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNR
                     HKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVV
                     SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG
                     TDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR
                     ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND
                     TVNPAAQDDPKSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTHMLFGD
                     AKASVDAILKAL"
     gene            complement(17709..18743)
                     /gene="tqsA"
                     /locus_tag="RHX79_001232"
     CDS             complement(17709..18743)
                     /gene="tqsA"
                     /locus_tag="RHX79_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2 transporter TqsA"
                     /protein_id="HDV2196427.1"
                     /translation="MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIA
                     VILNPLVQHMVRWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIM
                     TPLQALEPLLQRVGIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLF
                     MLLEVPQLPGKFQQMMARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAAL
                     DVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFG
                     NILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSI
                     AVLLSDLNKE"
     gene            19155..19520
                     /gene="mdtJ"
                     /locus_tag="RHX79_001233"
     CDS             19155..19520
                     /gene="mdtJ"
                     /locus_tag="RHX79_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtJ"
                     /protein_id="HDV2196428.1"
                     /translation="MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLS
                     YIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI
                     KSGTRKARKPELEVNHGAV"
     gene            19507..19836
                     /gene="mdtI"
                     /locus_tag="RHX79_001234"
     CDS             19507..19836
                     /gene="mdtI"
                     /locus_tag="RHX79_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtI"
                     /protein_id="HDV2196429.1"
                     /translation="MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAA
                     VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAG
                     MIMVKLA"
     gene            complement(19875..20696)
                     /locus_tag="RHX79_001235"
     CDS             complement(19875..20696)
                     /locus_tag="RHX79_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HDV2196430.1"
                     /translation="MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDR
                     VPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRF
                     VSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITP
                     LPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDT
                     LPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK"
     gene            complement(20796..20879)
                     /locus_tag="RHX79_001236"
     CDS             complement(20796..20879)
                     /locus_tag="RHX79_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196431.1"
                     /translation="MVGRYRFEFILIILILCALIAARFYLS"
     gene            complement(20972..21307)
                     /locus_tag="RHX79_001237"
     CDS             complement(20972..21307)
                     /locus_tag="RHX79_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310330.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid shock protein"
                     /protein_id="HDV2196432.1"
                     /translation="MKKQIEGMTMKKVLALVVAAAMGLSSAAFAAETATTPAPTATTT
                     KAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAGKHSHQQP
                     AKPAAQPAA"
     gene            complement(21704..22957)
                     /locus_tag="RHX79_001238"
     CDS             complement(21704..22957)
                     /locus_tag="RHX79_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196433.1"
                     /translation="MSRTTTVDGAPASDTDKQSISQPNQFIKRGTPQFMRVTLALFSA
                     GLATFALLYCVQPILPVLSQEFGLTPANSSISLSISTAMLAIGLLFTGPLSDAIGRKP
                     VMVTALLLASICTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAF
                     SMGLYISGNSIGGMSGRLISGVFTDFFNWRIALAAIGCFSLASALMFWKILPESRHFR
                     PTSLRPKTLFINFRLHWRDRGLPLLFAEGFLLMGSFVTLFNYIGYRLMLSPWHVSQAV
                     VGLLSLAYLTGTWSSPKAGTMTTRYGRGPVMLFSTGVMLFGLLMTLFSSLWLIFAGML
                     LFSAGFFAAHSVASSWIGPRAKRAKGQASSLYLFSYYLGSSIAGTLGGVFWHNYGWNG
                     VGAFIALMLVIALLVGTRLHRRLHA"
     gene            23064..23957
                     /locus_tag="RHX79_001239"
     CDS             23064..23957
                     /locus_tag="RHX79_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2196434.1"
                     /translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQ
                     IGARLLARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSS
                     APFIRAVSDTLSLFRRDYPDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEH
                     AVIVHEPLMAMIPHDHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHL
                     TPVITQEVGEAMTIIGLVSAGLGVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWP
                     KHHEQSPAARNFRIHLLNALR"
     gene            24092..25312
                     /gene="mlc"
                     /locus_tag="RHX79_001240"
                     /gene_synonym="dgsA"
     CDS             24092..25312
                     /gene="mlc"
                     /locus_tag="RHX79_001240"
                     /gene_synonym="dgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor Mlc"
                     /protein_id="HDV2196435.1"
                     /translation="MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP
                     ASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALR
                     DLSSKLVVEESQELALKDDSPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTE
                     NGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV
                     VIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILE
                     LAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFN
                     PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKD
                     AMYNGSLLIRLLQG"
     gene            25437..26132
                     /gene="bioD"
                     /locus_tag="RHX79_001241"
     CDS             25437..26132
                     /gene="bioD"
                     /locus_tag="RHX79_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HDV2196436.1"
                     /translation="MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGS
                     KETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANL
                     TDKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIA
                     NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLA
                     MLRSVLAVDRVTV"
     gene            complement(26085..27377)
                     /gene="clcB"
                     /locus_tag="RHX79_001242"
     CDS             complement(26085..27377)
                     /gene="clcB"
                     /locus_tag="RHX79_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001296088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated ClC-type chloride channel ClcB"
                     /protein_id="HDV2196437.1"
                     /translation="MHHLHIYPDLRTMFRRLLIATVVGILAAFAVAGFRHAMLLLEWL
                     FLNNDSGSLVNAATNLSPWRRLLTPALGGLAAGLLLMGWQKFTQQRPHAPTDYMEALQ
                     TDGQFDYAASLVKSLASLLVVTSGSAIGREGAMILLAALAASCFAQRFTPRQEWKLWI
                     ACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLASLGPVIISAVVALLVSNLINHSDAL
                     LYNVQLSVTVQARDYALIISTGVLAGLCGPLLLTLMNACHRGFVSLKLAPPWQLALGG
                     LIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASSGSGAPGGVF
                     TPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTGMATLLAATTHAPIMSTLMICEM
                     TGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS"
     gene            complement(27537..28151)
                     /gene="dmsD"
                     /locus_tag="RHX79_001243"
     CDS             complement(27537..28151)
                     /gene="dmsD"
                     /locus_tag="RHX79_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707489.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tat proofreading chaperone DmsD"
                     /protein_id="HDV2196438.1"
                     /translation="MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWET
                     QWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDS
                     TLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWST
                     RFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR"
     gene            complement(28194..29048)
                     /locus_tag="RHX79_001244"
     CDS             complement(28194..29048)
                     /locus_tag="RHX79_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HDV2196439.1"
                     /translation="MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNDADRQHIV
                     RGMFFLWLLMGIGFIASVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWL
                     VAVIGKMPQALGKLWLLVSMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLS
                     GPILAAAILRAARVTFNTTPFAIISVLALIACAGVIVLQGLSLASIHSSVQQASALVP
                     DYASLQVWRVVLLCAGLGCWLCPLIRRREPHVAGLILGLILILGGEMIGRVLFYGLHM
                     TVGMAIAG"
     gene            complement(29050..29667)
                     /gene="dmsB"
                     /locus_tag="RHX79_001245"
     CDS             complement(29050..29667)
                     /gene="dmsB"
                     /locus_tag="RHX79_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HDV2196440.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAG
                     GDWQEDNGVWHQNVFAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGC
                     RYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQ
                     KHGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV"
     gene            complement(29678..32101)
                     /locus_tag="RHX79_001246"
     CDS             complement(29678..32101)
                     /locus_tag="RHX79_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416105.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
                     /protein_id="HDV2196441.1"
                     /translation="MKIHTTEALMKAEISRRSLMKTSALGSLALASSAFTLPFSQMVR
                     AAEAPVEEKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRG
                     RSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHV
                     LYGTGVDGGNITNSNVPYRLMNSCGGFLSRYGSYSTAQISAAMSYMFGANDGNSPDDI
                     ANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLP
                     IRPGTDGALACAIAWVLITENMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEG
                     PDGIAKTPEWAAKITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAIAM
                     LSVLTGNVGINGGNSGVREGSWDLGVEWFPMLENPVKTQISVFTWTDAIDHGTEMTAT
                     RDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTHEVLQDDSKCEMIVGIDHFMTAS
                     AKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAKFERKPIYWMLSEVAKRL
                     GPDVYQTFTEGRSQHEWIKYLHAKTKERNPEMPDYEEMKTTGIFKKKCPEEHYVAFRA
                     FREDPQANPLKTPSGKIEIYSERLAKIADTWELKKDEIIHPLPAYTPGFDGWDDPLRK
                     TYPLQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPIDAQARGIRHGDTVRVFNNNG
                     EMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSINILTSHRPSPLAKGNPSH
                     SNLVQIEKV"
     gene            complement(32162..34588)
                     /locus_tag="RHX79_001247"
     CDS             complement(32162..34588)
                     /locus_tag="RHX79_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
                     /protein_id="HDV2196442.1"
                     /translation="MSKNDRMVGISRRTLVKSTAIGSLALAAGGFSLPFTLRSAAATV
                     QQASEKVIWGACSVNCGSRCALRLHVKDNEVTWVETDNTGSDEYGNHQVRACLRGRSI
                     RRRINHPDRLNYPMKRVGTRGEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYS
                     SGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTTD
                     IENSKLVVMFGNNPAETRMSGGGITYLLEKAREKSNAKMIVIDPRYTDTAAGREDEWL
                     PIRPGTDAALVAGIAWVLINENLVDQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGE
                     GDDNTAKTPQWASQITGIPVDRIIKLAREIGTAKPAYICQGWGPQRQANGELTARAIA
                     MLPILTGNVGISGGNSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTA
                     IRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVIIENFMTS
                     SAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKR
                     LGPDVYQKFTEGRTQEQWLQHLYAKMLAKDPALPSYDELKKMGIYKRKDPNGHFVAYK
                     AFRDDPEANPLKTPSGKIEIYSSRLAEIARTWELEKDEVISPLPVYASTFEGWNSPER
                     RTFPLQLFGFHYKSRTHSTYGNIDVLKAACRQEVWINPIDAQKRGIANGDMVRVFNHR
                     GEVRLPAKVTPRILPGVSAMGQGAWHEANMSGDKIDHGGCVNTLTTLRPSPLAKGNPQ
                     HTNLVEIEKI"
     gene            complement(34787..35092)
                     /locus_tag="RHX79_001248"
     CDS             complement(34787..35092)
                     /locus_tag="RHX79_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1161 domain-containing protein"
                     /protein_id="HDV2196443.1"
                     /translation="MKLSTCCAALLLALASPVVLAAPGSCERIQSDISQRIINNGVPE
                     SSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSGNVSAPAQSTQDGAPAEPQ"
     gene            35200..35910
                     /locus_tag="RHX79_001249"
     CDS             35200..35910
                     /locus_tag="RHX79_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416102.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfC family lipoprotein"
                     /protein_id="HDV2196444.1"
                     /translation="MKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSNEFDFDPLRG
                     PVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVALVLDANYYRDAET
                     LEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKS
                     NDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEG
                     VKPAVERVYTIKNTIDYY"
     gene            complement(35913..36473)
                     /gene="speG"
                     /locus_tag="RHX79_001250"
     CDS             complement(35913..36473)
                     /gene="speG"
                     /locus_tag="RHX79_001250"
                     /EC_number="2.3.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine N1-acetyltransferase"
                     /protein_id="HDV2196445.1"
                     /translation="MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVEL
                     SDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATR
                     AAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAI
                     RMCIFQHQYLAEHKTPGQTLLKPTAQ"
     gene            complement(36508..36849)
                     /locus_tag="RHX79_001251"
     CDS             complement(36508..36849)
                     /locus_tag="RHX79_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1283 family protein"
                     /protein_id="HDV2196446.1"
                     /translation="MKITLSKRIGLLAILLSCALALSTTVHAETNKLVIESGDSAQSR
                     QHAAMEKEQWNDTRNLRQKVNKRTEKEWDKADAAFDNRDKCEQSANINAYWEPNTLRC
                     LDRRTGRVITP"
     gene            36984..37310
                     /locus_tag="RHX79_001252"
     CDS             36984..37310
                     /locus_tag="RHX79_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HDV2196447.1"
                     /translation="MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLAL
                     FVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIV
                     AGWGRT"
     gene            37516..38730
                     /gene="rspA"
                     /locus_tag="RHX79_001253"
     CDS             37516..38730
                     /gene="rspA"
                     /locus_tag="RHX79_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001625315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="starvation-sensing protein RspA"
                     /protein_id="HDV2196448.1"
                     /translation="MKIVKAEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVA
                     SYLQDHLCPQLIGRDAHRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAAN
                     MPLYQLLGGASREGVMVYCHTTGHSIDEALDDYARHQELGFKAIRVQCGIPGMKTTYG
                     MSKGKGLAYEPATKGQWPEEQLWSTEKYLDFMPKLFDAVRNKFGFNEHLLHDMHHRLT
                     PIEAARFGKSIEDYRMFWMEDPTPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLI
                     EEQLIDYIRTTLTHAGGITGMRRIADFASLYQVRTGSHGPSDLSPVCMAAALHFDLWV
                     PNFGVQEYMGYSEQMLEVFPHNWTFDNGYMHPGDKPGLGIEFDEKLAAKYPYEPAYLP
                     VARLEDGTLWNW"
     gene            38742..39761
                     /locus_tag="RHX79_001254"
     CDS             38742..39761
                     /locus_tag="RHX79_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent oxidoreductase"
                     /protein_id="HDV2196449.1"
                     /translation="MKSILIEKPNQLSIIEREIPTPSAGEVRVKVKLAGICGSDSHIY
                     RGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNV
                     CTTLAVLGVHADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTE
                     NDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPL
                     GEIFAEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKE
                     LSIFSSRLNANKFPVVIDWLSKGLIKPEKLITHTFDFQHVADAISLFEQDQKHCCKVL
                     LTFSE"
BASE COUNT         9990 a         9658 c        10258 g         9952 t
ORIGIN      
        1 gccatggccg ttatttgcct gacggctgcc tctggcctta cctctgctta tgcggcgcaa
       61 ctggctgacg atgaagcggg actacgcatc agactgaaaa acgaattgcg cagggctgat
      121 aagcccagtg ctggcgcggg aagagatatt tacgcatggg tacagggagg attgctcgat
      181 ttcaatagtg gttattattc caatattatt ggcgttgaag gcggggcgta ttatgtttat
      241 aaattaggtg ctcgtgctga tatgagtacc cggtggtatc ttgatggtga taaaagtttt
      301 ggctttgccc tgggggcagt aaaaataaaa cccagtgaaa atagcctgct taaattaggt
      361 cgcttcggga cggattatag ttacggtagc ttaccttatc gtattccgtt aatggctggc
      421 agttcgcaac gtacattacc gacagtttct gaaggagcat taggttattg ggcgttaacg
      481 ccaaatattg atctgtgggg aatgtggcgt tcacgagtat ttttatggac cgattcaaca
      541 accggtattc gtgatgaagg ggtgtataac agccagacgg gaaaatacga taaacatcgc
      601 gcacgttctt ttttagccgc cagttggcat gatgatacca gtcgctattc tctgggggga
      661 tcggtacaga aagatgtttc caatcagata caaagtattc tcgagaaagg cataccgctc
      721 gacccgaatt atacgttgaa aggggagttg ctcggctttt acgcgcaact cgaaggttta
      781 agtcgtaata ccagccagcc caatgatacg gcgttggtta gtggacaagt gacctggaat
      841 gcgccgtggg gaagcgtatt tggcagtggt ggttatttgc gccatgcaat gaatggtgcc
      901 gtggtggata ccgacattgg ctatcccttt tcattaagtc ttgatcgtaa ccgtgaagga
      961 atgcagtcct ggcaattggg cgtcaactat cgtttaacgc cgcaatttac actgacattt
     1021 gcaccgattg tgactcgcgg ctatgaatcc agtaaacgag atgtgcggat tgaaggcgcg
     1081 ggtatcttag gtggtatgaa ctatcgggtc agcgaagggc cgttacaagg gatgaatttc
     1141 tttcttgctg ccgataaagg gcgggaaaag cgcgatggca gtacgctggg cgatcgcctg
     1201 aattactggg atgtgaaaat gagtattcag tatgacttta tgctgaagta aaagataacg
     1261 ccggagagaa aaatctccgg cgttttgtct gtgaattact gctgcggaat agcgggtacg
     1321 accggaacat ttaatgccgg cattgcaaac ataccaacga aatcttccag tggcattttc
     1381 tgcccgttta acgttatctg accgttagta tattgcaggc tggtggtgat ggtattgtcc
     1441 tgcaaggtgg tcagacggaa catctgcccc attgctgatg caccttcaac ttgctgtttc
     1501 gccagttttt tcgcttgatc ttcctgataa ccttccagct tcgctacctg agtcataaac
     1561 tcagttgcca tatccaccgg aatggtcagt ttcgcatcca gagatttaac cgaacgatct
     1621 acttcctgcg ccagcgtttg cggcgcttct ttagtcgttg ccggatcttt caggaacagc
     1681 gacagattca gcgcactttc accctgactg tttttccagc ttagcggcgc gatagtaatc
     1741 accggatcgc ctttcaacat cagcggcagg gcgctaaaga aggcttccgt cactttctcc
     1801 tgataaagtt cgggattgtt ggcaatttct ggctgtgcca gcagcgcctg agtttgcgcg
     1861 ttatattgct ggctaaactg atgccaggct tcaccatcaa tctggccgac ttttaaagtc
     1921 agcttgccgc tgcccagatc ctgattctgt accttcaggc tgtttagcga gtaatccagt
     1981 tggctattga tcgttttacc gtcattgacc agatccgatt taccgctgat ctccatgcct
     2041 tccagcagtg ccagttcttt gccttccacc gaaatggtca ttttttccag tgacagtttt
     2101 tggtttccta cgcgctcacc aaaacttgcc agcgtgctgg aaccgtcggt tttcagatta
     2161 ttaaaggtca actgcacttt ctggttgtat tcgttaactg cgtctatccg accactttgc
     2221 gcctccccgg aaagggagat agctttgccg tctctgtccg catttaactg gaactcgccg
     2281 ccgctaaagg cgactttttc atccttttgc tcgtaattca gtggcttgag cgaaatatcg
     2341 gaactggaat caccgctgta accaatgcgc gagttaatct caaaaggcgt ttcacctttt
     2401 gccatatcaa acagtggttt gcttacttcg ttattaacca gcgtggtttg aattgatgcc
     2461 atcgacggga tcaggttcag ttttttaagc tgggcaagcg ggaagggacc atgatcaacc
     2521 gattcgttga agatgacgct ctgaccgctt ttaatccacg gattttcttt cccggcaatg
     2581 ggtttcacca acagttgcaa ctggctgctg aatacgccgc gatgatagtt ttgataactc
     2641 acttccaggt tggattcagg agctgtcagt ttgagttgcg cgttcgcctg cgcgaccatg
     2701 tcttcgagat gggtttcaat cttcttgcct gtataccatg cgccgcctgt ccagactacg
     2761 cctagcgcaa caatgacgcc taccgctacc agcgatttat tcataatgat tatccataaa
     2821 atgaaatcag gcggactggc cgcctgaagg tgttataagc ctttaataag cttagcaaga
     2881 gatgttaatt ttttcagtaa gctcttacag cttgttgtaa acacgcgcta aacggccgtg
     2941 gcctttgaca gtcaccggtg attcgttggc ggcaataaac gctgattcac ccggtttaag
     3001 ctgtaactgc tgagaacctt tccacaacgt tgcatcgcct tcgacgcaga acaaaatggc
     3061 ggcactctgc tggctaatgg tggtttcttt atcactaagg tcatgcagcg agaaggcaaa
     3121 atcatccact ggaatcggga agtccagttc tgcaccttgt ttcaccggct gggtcaacaa
     3181 ctggttagcc ggtttggctt cgaatttcac attggcaacc agttccggaa tatcaatgta
     3241 cttaggcgtc agacccgcac gcagcacgtt atcggagttc gccatcactt ccagcgccac
     3301 gccttgcagg taagcgtgcg gtgtttcagc gaacaggaac atcgcttcgc caggattcaa
     3361 tttcaccaca ttcagtaaca gcggggagaa caggccgctg tcttccgggt aaaattcaga
     3421 aattaaacga atcgtttgcc acggttcacc ctgctgactg tcgagcgccg attttaaaat
     3481 cgccagcgcg cgggattttt cttcaccctg catattcaac aggctggcga acagttcgct
     3541 taaacgttcg gcattaggct gttgtaaaaa gtgagcaatt gccggatgtg cacctgcgac
     3601 tggctggagt agggagacaa tctcggaaaa ctcacgaaac gcgttcatcg caaggaaagg
     3661 cgtcagcgca aaaaccagct ccggcttgtg gttaggatct ttatagttac gctcggcggc
     3721 atccatcggg atacctgcgg cattttcttt ggcaaaaccg atttcagaat tgcgtttgtt
     3781 tggatgaacc tgaatggaga gcggctgtgc tgcgcataat actttgaaca ggaaaggcag
     3841 ttcgccaaag cgtttggcaa cggcctctcc gagcagagtc gatttattac tctcaatcac
     3901 atcacgcagt gaaacgatat ctccggcggc attctgcacc cgtgaactgc ttttcggatg
     3961 tgcgcccatc cacagctcgg ccatcggctg gctggacgga ttttccatac cataaagttc
     4021 agtcaacgcc gttttgctgc cccaggcata gttttgcact gagttaatga gtttttgcat
     4081 gatcaatccc tgttttaatg tggaaattaa tcccgctatt aaagcaagaa tcctacggga
     4141 agtaacctgg agccgcaaaa agtcgtacta gtctcagttt ttgttaaaaa agtgtgtagg
     4201 atattgttac tcgcttttaa cagggcaacg gaacacccgc ccagagcata accaaaccag
     4261 gcagtaagtg agagaacaat gtcaaacaaa ccctttcatt atcaggctcc ttttccactc
     4321 aaaaaagatg atactgagta ttacctgcta accagcgaac acgttagcgt atctgaattt
     4381 gaagggcagg agattttgaa agtcgcaccc gaagcgttaa ctctgttggc gcgtcaggca
     4441 tttcatgatg cgtcatttat gctgcgtccg gctcaccaac aacaggtggc cgacattctg
     4501 cgtgacccgg aagccagcga aaatgataaa tatgtggcgc tgcaattcct gcgcaactcc
     4561 gacatcgcgg cgaaaggcgt tctgccaacc tgtcaggata ccggcaccgc gattattgtt
     4621 ggtaaaaaag ggcagcgtgt atggaccggt ggcggtgatg aagcggcgct ggcacgcggt
     4681 gtctataaca cttatatcga agataatctg cgctactcgc aaaacgcgcc gctggatatg
     4741 tataaagagg tgaataccgg caccaatcta ccagcgcaga tcgatcttta tgccgttgat
     4801 ggcgacgagt acaaattcct ctgtatcgcc aaaggtggcg gttcggctaa caagacgtat
     4861 ctctatcagg aaaccaaagc gttactaacg ccggggaaac tgaaaaatta cctggttgag
     4921 aagatgcgca cgctgggtac ggcggcctgt cctccgtatc atattgcgtt cgttattggt
     4981 ggaacttctg cagaaacgaa ccttaaaacg gtcaaactgg cttccgctaa atactatgat
     5041 gaactgccaa cggaagggaa tgagcacggt caggcgttcc gcgatgtgga actggaaaaa
     5101 gaattgctga tcgaagcgca aaatcttggt ctgggtgcgc agtttggtgg taaatacttc
     5161 gctcacgaca tccgcgtgat tcgcctgcca cgtcacggcg catcctgccc ggtcggtatg
     5221 ggcgtctcct gctctgctga ccgtaatatc aaagcgaaga tcaaccgtca ggggatctgg
     5281 atcgaaaaac tggaacataa cccaggcaaa tatatcccgg aagagctgcg caaagcggga
     5341 gaaggcgaag cggtgcgcgt tgaccttaac cgtccgatga aagagatcct cgcacagttg
     5401 tcgcagtatc ccgtttctac acgcttatcg cttaacggca cgattatcgt cggtcgtgat
     5461 attgctcacg ccaaactgaa agagcggatg gataacggtg aagggctgcc gcagtacatt
     5521 aaagatcatc cgatttacta cgcgggtccg gccaaaacgc cggaaggtta tgcctccggt
     5581 tctcttggcc caacgaccgc cggacggatg gattcttatg tcgatcaact gcaagcgcag
     5641 ggcggaagta tgatcatgct ggcgaaaggc aaccgcagcc agcaggtgac ggatgcctgt
     5701 aaaaaacacg gcggcttcta ccttggcagt atcggtggtc cggccgctgt attggcgcag
     5761 ggaagtatta agagcctgga atgtgttgaa tatccggaac tgggaatgga agccatctgg
     5821 aaaattgaag tggaagattt cccggcgttt atccttgtgg atgataaagg aaatgacttc
     5881 ttccagcaga tacaactcac acagtgcact cgctgtgtga aataaacaga gccgcccttc
     5941 ggggcggttt ttttacatgg cacgaaagac caaacatttg ttatcaaata gtaaataata
     6001 agtgagctaa aagttgctta acgaaagcaa aacagaaaga aaaaattaaa caggtgagga
     6061 gcaggccatg aatacagtac gcagcgaaaa agattcgatg ggggcgattg atgtcccggc
     6121 agataagctg tggggcgcac aaactcaacg ctcgctggag catttccgca tttcgacgga
     6181 gaaaatgccc acctcactga ttcatgcgct ggcgctaacc aagcgcgcag cggcaaaagt
     6241 taatgaagat ttaggcttgt tgtctgaaga gaaagcgagc gccattcggc aggcggcgga
     6301 tgaagtactg gcaggacagc atgacgacga attcccgctg gctatctggc agaccggctc
     6361 cggcacgcaa agtaacatga acatgaacga agtgctggct aaccgggcca gtgaattact
     6421 cggcggcgtg cgcgggatgg aacgtaaagt tcaccctaac gacgacgtca acaaaagcca
     6481 aagttccaac gatgtctttc cgacggcgat gcacgttgcg gcgctgctgg cgctgcgcaa
     6541 gcaactcatt ccgcagctta aaaccctgac acagacgctg agtgaaaaat cgcgtgcatt
     6601 tgccgatatc gtcaaaatcg gtcgaaccca cttgcaggac gccacgccgc taacactagg
     6661 gcaggagatt tccggctggg tagcgatgct cgagcataat ctcaaacata tcgaatacag
     6721 cctgcctcac gtagcggaac tggctcttgg cggtacagcg gtgggtactg gactaaatac
     6781 ccatccggag tatgcgcgtc gcgtagcaga tgaactggca gtcattacct gtgcaccgtt
     6841 tgttaccgcg ccgaacaaat ttgaagcgct tgcgacctgt gatgccctgg ttcaggcgca
     6901 cggcgcgttg aaagggttgg ctgcgtcact gatgaaaatc gccaatgatg tccgctggct
     6961 ggcctctggc ccgcgctgcg gaattggtga aatctcaatc ccggaaaatg agccgggcag
     7021 ctcaatcatg ccggggaaag tgaatccaac acagtgtgag gcattaacca tgctctgctg
     7081 tcaggtgatg gggaacgacg tggcgatcaa catggggggc gcttccggta actttgaact
     7141 gaacgtcttt cgtccaatgg tgatccacaa tttcctgcaa tcggtgcgct tgctggcaga
     7201 tggcatggaa agttttaaca aacactgcgc agtgggtatt gaaccgaatc gtgagcgaat
     7261 caatcaatta ctcaatgaat cgctgatgct ggtgactgcg cttaacaccc acattggtta
     7321 tgacaaagcc gcggagatcg ccaaaaaagc gcataaagaa gggctgacct taaaagctgc
     7381 ggcccttgcg ctggggtatc ttagcgaagc cgagtttgat agctgggtac ggccagaaca
     7441 gatggtcggc agtatgaaag ccgggcgtta atccgcaaca tacaggtgca gccgtggaat
     7501 gatcaaacga agcggctgcg cctgtggttt ataacggtgc tgcacattgt cggcatcgta
     7561 atttaacaac tcaccaacgt ccggcacgcg cgcgccatta tcccgattaa tcagtgcaat
     7621 cagcggtgta gggcaggcgt gttggacttg tttttgatct cctttgtacc agacgcgggc
     7681 aatcggctgc accttcaccg gacgtttgat ttttaacttc gcgttctgtg gcagggcagc
     7741 gatatcctga tactctcgct ccagttttct ttgccactcc tcgcgcgtcc acggtgcgac
     7801 actgcgtggt gatttcaggc ttttttccag ctgtgccagg acttcatcac gatgcaaatt
     7861 cttaatgata tgtttattag cccaaccaaa gcgtaaagtg gcggggtcgt gcagaacggt
     7921 gagcgtgcgg taagcattaa gggtgatcag ccccggcaaa tgacgatgca cccattcaaa
     7981 acgtgccgcg gtggggagtt ctgattcaac cgtgacgata tgctcgaacg tggtcttgag
     8041 tttattgatg tgctgaatat gactgaccaa cgctgcttgc gaaaggttat cgacctggta
     8101 acacaacacg ccaggcagac ggacagcggc cttgctgctg cgattttcgg actgttgttg
     8161 aataaataaa tggcggaaat gacgcaacgc cagcgactgc gcgtcgttgc cgagatgttg
     8221 ttttacctca atacgattaa gcggattatg ctcatcctct ttttttacct ccggcaaaga
     8281 gaacacgcgg gcaaccaata gcttgtgttg ctcaagatga gcggcaaatg cagccagctc
     8341 ttgttccatc tggcgaaagg tagtgttgag tcggtctacg agatcgtaac gcgccataat
     8401 attaaccact ttagttacaa catacttatt ttatagcaca gtcgtggtga cttgaccatc
     8461 gtgcgcgtag tgtcaggcag aggtaaattg cgggatgtta tgccataacg gccagctaaa
     8521 cgagaagcga gcaccaccca gttcgctggt gtcacaatta accgtaccgc ccattgccag
     8581 tgctatagag tggacaattg ccagccccag cccgcagccg ccggttgagc gatcccggct
     8641 gggatcgagg cgaacaaaag gttcaaagat atgttcgcgg ttttctgggg caatccctgg
     8701 gccatcatcc tcaacaatta atgtcgctct attccccgac agtagcaggc tggtttcaac
     8761 cgttgaatgg cagtaccgca gggcgttatt gagcaaatta tccagcacgc gctccattaa
     8821 gcgcatatcc aacgccgcat aatggccttg cgcgagcgtt ttaatccgta ccgttttatc
     8881 gggcgttact gcctgaatgt ctgccagatg cgttgacagc cacaacggca ggtctggttc
     8941 gctaagatga agctcgtttt gtgggcgatc gagtcgggca taagtcagca gctcttcaat
     9001 taaagcttca agttgactga tatcacgatt caacgcctgg gattcggcgg cgctcaggtt
     9061 atcgctcatc tccagtcgat aacgcaggcg cactaacggt gttcgcagtt cgtgagcgat
     9121 accgtcaata agctgttttt tgctggcaat caaggcgttg atattgtccg ccatctggtt
     9181 aaatgcgata ccaagtcgtt caaagctcga accctcatca aagtggatac gctcattgag
     9241 atgcccatcg ccaaatcgtt gcgccgctgc ttccagtttt aacatatcct gccagtgcgg
     9301 acgcatccag ataaacaccg gaaaggcgag ggaaatagca ataaaagcga tcagggcgat
     9361 atccagcaat cgcatctgat ggagataata aagataagga acaggaccaa ctgccagcac
     9421 gtagtggctg cgcgggatac gctgcaaaaa cgtgtactga tcgtccaggg cgacaatttc
     9481 gccgccacgc agtcggtgca tggaaatatc atcaagatgg tatttactca atggctcgac
     9541 acgcagatcg aaagagagat ttaaatccat ctctttcagc gtcttacccc agtcgtgtgg
     9601 ggggatctca cgcaattcgc tgcgcatcag atacagcgaa ctgttcatca aatcatccag
     9661 cgactgtttg cccgcgcgtt cggcggtaaa tttgtacacc aacccaacca gcagagacat
     9721 cacaaggaag cagacaaaca ataacaggta aaactggata aacagttttt tcatcgctta
     9781 ttcccatgca tgaggcgcaa aaagatagcc tttgttacgc acagttttaa tgcgataagg
     9841 ttctgcggcg ttatcgagca gtttttttct taaccgcgaa atagccacgt ccacgctacg
     9901 atccagtccg tcataactga cgccgcgtaa atttttcagc aatgcatcgc ggtccatgat
     9961 ttgcccggca tgggtagcta attcccacaa taattcgaaa tcagctgtcg agagcgagat
    10021 ttcagtgtta gccagggtga ctacgcggtt gatgggatcg atggtcaacg tgccgaaatg
    10081 cagggctttg tagggagtca gagacgtttc ctgaagacct ttgctcagtg tggcttgctc
    10141 attctgacgc aaatgcaaac gtaaacgcgc tagcaaaaca gcagggggcg tcgttttgag
    10201 aatatagtcg caggcaccca tttccagtgc caggatgtgg ttcatatcgc tatcgagaga
    10261 ggttagaaga acaatcggtc cagaccactt tgcgcgtaaa tcacgacaaa tggtcatgcc
    10321 gtccttgcct ggtagcatga tgtcgagtaa caccaaatcc ggattttctc gcaaaatggt
    10381 ttcttcggcc tggtcgccgc gcggctctac ggtaacctgc atatcatgtt ttgccaggta
    10441 cgcggcaatc agtgaaccga cttccgcatc atcttccaca aatacgatag tgttcataac
    10501 attcacggta gatataaaaa cgtcacaata caccgcgctg tttttactta ctatcaatcg
    10561 tttctaaaca agttttcatc aggtattcta ctgatgactt gttatggaag tgttaaggta
    10621 aaaaaatggg gctggtaatc aaagccgcgc tcggtgcgct ggtagtgctg ttgattggtg
    10681 ttttagcaaa aacgaaaaat tattatatcg ccgggctgat tccacttttc ccgacctttg
    10741 cgcttatcgc gcattatatt gttgccagcg aacgcggcat tgaagcctta cgcgcaacca
    10801 tcatttttag tatgtggtcg attattccct attttgttta cctggtgtcg ctgtggtatt
    10861 tcaccggaat gatgcgcttg cccgccgctt ttgttggttc tgttgcgtgt tgggggataa
    10921 gcgcatgggt gttgattata tgctggataa agctgcatta acgcagatga cgaccgccat
    10981 caagtgggaa actgcgtccg gtgacaaagc aactggtaag taagtaatcg accaggtcga
    11041 tcacttcttt ctcgccaggc gcggttttca tcagtgattt attcagcgcc tgttgtcgat
    11101 attcggcatc atcatgttca ttaaacagga tcagcgatgg cgcaatagaa ttcactttca
    11161 cttccggtgc cagcttgcgg gcaaacgagc gggtcatatt atccagtgcc gctttgcttg
    11221 cagcatacgc aacatgtttg tcgctaccgc gctccaccac ataatcggta aagtgaatga
    11281 tatcgctggc ggcgtgtccg tgcccacgca gtaatctttc cagcgcatgg ttgagcaggt
    11341 atggggtatt aacgtggatc tgcatcatgc aagccagtac gtcggccagt ggtgtacctg
    11401 gtttttctgc catccacgca ctggcgttat gcaaaatagc acgcagacca tgggtgcttt
    11461 ttagtacttc atcggcaaac gccatcacac cgtcgttggt cgaaaaatca gcctgaatac
    11521 actgcgcacc tgccttaatc agtccatcaa tggctggata gtgcgtccga tagctgacaa
    11581 tcaccggttg cttttgatta atgaaatgcc aggcgagggc gaggccgatg cgacgacctc
    11641 cgccagtaat taatattggc aagggctggg ctttacccat cgttatctcc tttgctatcc
    11701 aacgatggga tgaacgttat cccaccagca tccaggtcgc cggaactgag gcaattaaca
    11761 gcatgccaat cagcaccatt tcctgacggt tcagtacatt atcatgtgta tgcgttttgc
    11821 gcgcatacag gaaaaccagc agccccggcg catacagaac aacggataac agcaagtgca
    11881 ttggaccaga ggcgtacaat aaccataagc cataaatgca ggcaccgaca cctaccgctt
    11941 tatgcagtgg acgggttgcg attttcagca agaacgcgcc gaccaggaaa tagggcacca
    12001 gaatcatttc tgaggcgatg gtcagcaacg tgttgtaatc ggaaccggtc agccagatga
    12061 gtaccagaca aatttgcacg cagatgttgg tcaaccacag tgaggcggat ggcgcagctt
    12121 gtgcgttctg gcgcgcaaaa atgcgtggga atgctttatg agtggcagcc aggaacggaa
    12181 cttctgccgc catgatggtc cagcttaagt acgcgccgca aacggaaacg atcaaaccgg
    12241 cagcgatgat gatttcgccc catggtccca tcatttccac catcagaccg gccattgacg
    12301 ggttacgaat ttcagccagt tcaggacgtg ccaccacacc cagcgaaagc agcgttacca
    12361 gcaagtaaac gcccagagcg gagagaaccg ccagcagtgt cgctttgcca acatcacgtt
    12421 tattacgcgc acgcgcagaa acaaccacgg caccttccac accaatgaaa acccacaggg
    12481 tgatcagcat ggtgtttttc acctgttccc aaacgggtac gccaagtgca agtccggtga
    12541 agtcgagctt gaaggtatcc agtttgaaca tcatcatcgc cagcacaaca aacagaccca
    12601 gcggcaacaa ttttgccagt gtcgccacca ggttaatgct ggcagcggtt tgcaccccgc
    12661 gcaggatcaa aaagtgaaca atccacaata aagccgatgc accgacgatc gattgccagg
    12721 tattaccatc gccgaacagg cgcaattccg gcgtgtccgt aaaaaagctt aacgcggaaa
    12781 aaacgatcac cagataggag acgttggcga tgactgcgca cagccagtat ccccatgcgg
    12841 aacaaaagcc gattagctcg ccaaaccctt cgcgggcata ggtaaagata ccgccgtcaa
    12901 gttcgggacg aatgcgcgtg aggatcagca tggcataggc cagcaataaa atgccagcgc
    12961 cagtaatacc ccagccgatg agcagtgctg ccgggctggc aactgccgcc atattttgcg
    13021 gcagactgaa aacacccgcg cccagcattg agcttaatac cagcgcggtg agtgcgctca
    13081 gtcccagttt cttttccatc gatatccagt gattaaaacg tgataagaag aataaatatt
    13141 agggcaaaac gcataaaaat ggagtttgcc actgaagcgc gggattttac gaagagatgt
    13201 gtctgcatgc aatggtcgcg gggaaatttg tgactaaaaa tgcgaaaggc ggcatcaagc
    13261 cgccttatag gagtaactga atagttattt atacagatct gcgctgacgg tcaggttatt
    13321 accacgttcc tgccactggc gggtgatgtg gtaatactta gcacctttct tcgcggcacg
    13381 tttcgcaacc tgataggaga cttcggtcat gttgccgtag ttgccagaga atttgatgct
    13441 gtcgaacggg accatcatcg ctgctgtcgc tttgttcagt tcttcgactt tagtgccgtc
    13501 aggaagcgtg acagtgtaac gtccgccttt tgatgactgg gtttcaaaga aacgaccgac
    13561 ttcagaactt ggtgatgcgg tagtcgcaac acctgggatc tcaactttct tcgcggcttc
    13621 gccaccggca gccagagctg cacgtcctgc ttcggaatct gccgggatca catccgggct
    13681 ctggacgata cgtttcttag catctttttt atagatgaat gcagtaatac gctggttgcc
    13741 gccctggttg gcatcgattt gacgaacaat gtagaaagag taggcacctt tcgcttttgc
    13801 tgctttggtg atggcatcat tgacttctgg ctggctacga tagaagccct ggacggtgac
    13861 cgtgtcaaac ggttcaatca gaacagcctg atctttcggc agttcgacaa caccgttaat
    13921 tacgcgatta cttgtttctt ctgctttttc agcatcggct ttatagaggt cagcgaccac
    13981 acgccagtta ccgctgttac caaaatcaga agtgtcgaca acataaaaag aggcggcacc
    14041 ttctttatct gcgcgacgag aaacggcttt caccgcttcg ccaatagcat taaaacgacc
    14101 ggtaaccact acacggtcaa aaggtttaac cgctgccgct tgctccggtg tcagttctgt
    14161 tgctgcgtta acggagaatg ccgtagcaga aagcagtgcc gacgccagga gggtgttctt
    14221 aagcttcata aaaataatcc ttcgccttgc gcaaaccagg tactggtatt gttattaacg
    14281 agaaacgtgg ctgattattg catttaaacg gtgtaactgt ctgcgtcatt tttcatatca
    14341 cattccttaa gccaatttta atcctgctca aatgaccgtc tatgcttaaa aaacagccgt
    14401 atcagcatca ttactactga agcaactgaa ttgtataagt taatttaatg ttaagtagtg
    14461 attcgtgccg gggcgatgtc tcgttttacc cgaccgtcga agacaattat cagtctttat
    14521 ccggcgttct aaggtgttta tcccactatc acggctgaat cgttaatatt ttgcgagttc
    14581 acgccgaaat actgattttt ggcgctagat cacaggcata attttcagta cgttataggg
    14641 cgtttgttac taatttattt taacggagta acatttagct cgtacatgag cggcttgtgt
    14701 ggctcctgac acaggcaaac catcatcaat aaaaccgatg gaagggaata tcatgcgaat
    14761 tggcatacca agagaacggt taaccaatga aacccgtgtt gcagcaacgc caaaaacagt
    14821 ggaacagctg ctgaaactgg gttttaccgt cgcggtagag agcggcgcgg gtcaactggc
    14881 aagttttgac gataaagcgt ttgtgcaagc gggcgctgaa attgtagaag ggaatagcgt
    14941 ctggcagtca gagatcattc tgaaggtcaa tgcgccgtta gatgatgaaa ttgcgttact
    15001 gaatcctggg acaacgctgg tgagttttat ctggcctgcg cagaatccgg aattaatgca
    15061 aaaacttgcg gaacgtaacg tgaccgtgat ggcgatggac tctgtgccgc gtatctcacg
    15121 cgcacaatcg ctggacgcac taagctcgat ggcgaacatc gccggttatc gcgccattgt
    15181 tgaagcggca catgaatttg ggcgcttctt taccgggcaa attactgcgg ccgggaaagt
    15241 gccaccggca aaagtgatgg tgattggtgc gggtgttgca ggtctggccg ccattggcgc
    15301 agcaaacagt ctcggcgcga ttgtgcgtgc attcgacacc cgcccggaag tgaaagaaca
    15361 agttcaaagt atgggcgcgg aattcctcga gctggatttt aaagaggaag cgggcagcgg
    15421 cgatggctat gccaaagtga tgtcggacgc gttcatcaaa gcggaaatgg aactctttgc
    15481 cgcccaggca aaagaggtcg atatcattgt caccaccgcg cttattccag gcaaaccagc
    15541 gccgaagcta attacccgtg aaatggttga ctccatgaag gcgggcagtg tgattgtcga
    15601 cctggcagcc caaaacggtg gcaactgtga atacaccgtg ccgggtgaaa tcttcactac
    15661 ggaaaatggt gtcaaagtga ttggttatac cgatcttccg ggccgtctgc cgacgcaatc
    15721 ctcacagctt tacggtacta acctcgttaa tctgctgaaa ctgttgtgca aagagaaaga
    15781 cggcaatatc actgttgatt ttgatgatgt ggtgattcgc ggcgtgaccg tgatccgtgc
    15841 gggcgaaatt acctggccgg caccgccgat tcaggtatca gctcagccgc aggcggcaca
    15901 aaaagcggca ccggaagtga aaactgagga aaaatgtgcc tgctcaccgt ggcgtaaata
    15961 cgcgttgatg gcgctggcaa tcatcctttt cggttggctg gcaagcgttg cgccgaaaga
    16021 gtttcttggg cacttcaccg ttttcgcgct ggcctgcgtt gtcggttatt acgtggtgtg
    16081 gaatgtatcg cacgcgctgc atacaccgtt gatgtcggtc accaacgcga tttcagggat
    16141 tattgttgtc ggagcactgt tgcagattgg ccagggcggc tgggttagct tccttagttt
    16201 tatcgcggtg cttatagcca gcattaatat tttcggtggc ttcaccgtga ctcagcgcat
    16261 gctgaaaatg ttccgcaaaa attaaggggt aacatatgtc tggaggatta gttacagctg
    16321 catacattgt tgccgcgatc ctgtttatct tcagtctggc cggtctttcg aaacatgaaa
    16381 cgtctcgcca gggtaacaac ttcggtatcg ccgggatggc gattgcgtta atcgcaacca
    16441 tttttggacc ggatacgggt aatgttggct ggatcttgct ggcgatggtc attggtgggg
    16501 caattggtat ccgtctggcg aagaaagttg aaatgaccga aatgccagaa ctggtggcga
    16561 tcctgcacag cttcgtgggt ctggcggcag tgctggttgg ctttaacagc tatctgcatc
    16621 atgacgcggg aatggcaccg attctggtca atattcacct gacggaagtg ttcctcggta
    16681 tcttcatcgg ggcggtaacg ttcacgggtt cggtggtggc gttcggcaaa ctgtgtggca
    16741 agatttcgtc taaaccgttg atgctgccaa accgtcacaa aatgaacctg gcggctctgg
    16801 tcgtttcctt cctgctgctg attgtatttg ttcgcacgga cagcgtcggc ctgcaagtgc
    16861 tggcattgct aataatgacc gccattgcgc tggtattcgg ctggcattta gtcgcctcca
    16921 tcggtggtgc agatatgcca gtggtggtgt cgatgctgaa ctcgtactcc ggctgggcgg
    16981 ctgcggctgc gggctttatg ctcagcaacg acctgctgat tgtgaccggt gcgctggtcg
    17041 gttcttcggg ggctatcctt tcttacatta tgtgtaaggc gatgaaccgt tcctttatca
    17101 gcgttattgc gggtggtttc ggcaccgacg gctcttctac tggcgatgat caggaagtgg
    17161 gcgagcaccg cgaaatcacc gcagaagaga cagcggaact gctgaaaaac tcccattcag
    17221 tgatcattac tccggggtac ggcatggcag tcgcgcaggc gcaatatcct gtcgctgaaa
    17281 ttaccgagaa actgcgcgct cgtggtatca acgtgcgttt cggtatccac ccggttgcgg
    17341 ggcgtttgcc tggacatatg aacgtattgc tggctgaagc aaaagtaccg tatgacatcg
    17401 tgctggaaat ggacgagatc aacgatgact ttgctgatac cgataccgta ctggtgattg
    17461 gtgctaacga tacggttaac ccggcggcgc aggatgatcc gaagagtcct attgctggta
    17521 tgcctgttct ggaagtgtgg aaagcgcaga acgtgattgt ctttaaacgt tcgatgaaca
    17581 ctggctatgc tggtgtgcaa aacccgctgt tcttcaagga aaacacccac atgctgtttg
    17641 gtgacgccaa agccagcgtg gatgcaatcc tgaaagctct gtaaccctga cggcctctgc
    17701 ggaggccgtc actctttatt gagatcgctt aacagaacgg cgatgctttg acctcccgct
    17761 gtttgttcaa gcgcaatttt gacaataatt gttaacggca cggaaagcag catacccacc
    17821 ggtcctaaca accatcccca aaaaatcaac gacaaaaata ccaccaatgt ggaaagcccc
    17881 agcccacgtc ccatgatgcg cggctccaga atattgccga agaccagatt aatcagcaga
    17941 tatcccgcca gcaccagcaa cgcttcgtag aagccattaa acaccagtac ctgagcgata
    18001 ggggggattg ccgcgagaac tgaaccaata ttagggatgt aattaagcgc aaaggccagc
    18061 aatccccaga caaaagcgaa gcgaacatcg agtgcggcga gcatcgccca ggcgaccagg
    18121 ccggtgatga tgctgatggc tgttttcagc accagataat gagaaacact gtcaattgca
    18181 cgttgaatcg ccgccattcc ttcaaccgga cgcgccatca tttgctgaaa ttttccgggc
    18241 aattgtggca cttcgagcag cataaacagc accgtcagca gcaataaaaa tattgatgac
    18301 atggcattag ataactgcgt caataagttg gtgagcaacg tcatcgccgc gttcggatca
    18361 atgtaatgcg ccagctggtc aactgagacg tcaatcccta cgcgttgcaa caacggctca
    18421 agagcttgca gcggcgtcat aatagagttg cgatattgcg gtaacgtccg cgtcaactcg
    18481 ttgagcgcgg aacccagata agctaatagc aacaccatcg ccatcacgat gatggtcatc
    18541 aaaatcgaca ccgccagtac acgcggcact cgccagcgga ccatgtgttg caccagcggg
    18601 ttaagaataa cagcaataaa taatgcgaga ataaacggca cgatgatctc ggcggcaaaa
    18661 cggataccgc agagaataat gaccagcatt cccaacataa tgacgatttt taggccattg
    18721 agcgtgatga tcggctttgc catgcttgtc cccggttttt cttcctttgc taataataat
    18781 gtctttttcg ctccgtcatc ataacgaaaa tcaaaccgct caggtaaaga agtgaaaata
    18841 ttttgagtta attcttaagc tatgatacaa atcaggcgtg ttcaactacc gaggacaatt
    18901 atcatccgcg atgacgagaa gcaacactgc ggataattgt aatattatgg acaatttgtt
    18961 caggacgtta ttttctacat ttacccatct tcgtacctca tccactatct tgctcgtagg
    19021 tgagcagcac tggcgcaacg cgctttagtc ctttcttctg cctaagcttg ccctatgcgc
    19081 ggggcttgac cactttactt tggtttcgct gaattaagcg aaaattaaaa taattctctt
    19141 gcaggagaag gacaatgtat atttattgga ttttattagg tctggctatt gctacagaaa
    19201 ttaccggtac gctgtcaatg aaatgggcga gcgtcagtga gggaaatggc ggctttattt
    19261 taatgctggt gatgatttct ctgtcgtata tatttctctc tttcgccgtt aaaaaaatcg
    19321 ccttaggcgt agcttatgcg ttgtgggaag gtatcggtat tttatttatt accttgttca
    19381 gcgttttgtt attcgacgaa agtttatcgc tgatgaaaat tgccgggtta accaccctgg
    19441 tcgccgggat tgtgttgata aaatcaggta cccgtaaagc gcgtaaacct gaactggagg
    19501 tgaaccatgg cgcagtttga atgggttcac gccgcctggc tggcattggc aatcgtgctg
    19561 gaaatcgttg ctaacgtctt tttgaaattt tctgacggct ttcgtcgcaa aatatttggc
    19621 ttgctctccc tggcggcggt gctggctgcc tttagtgcgc tttctcaggc cgttaaaggg
    19681 atcgacttgt ctgtcgctta tgcattgtgg ggcgggtttg gtattgccgc cacgttagcc
    19741 gcaggttgga tcttgtttgg tcaacggtta aatcgtaaag gctggattgg cctggtcttg
    19801 ctgttggctg gaatgatcat ggtgaaactt gcctgatgaa gacgctgccc gcgctgtcgg
    19861 gcagcgtttg aacattattt ttgcgacagt tgatccagct tgtcgcgaaa accggtaaca
    19921 gaaatggccc ggttatcggc gcgccagcga tctttcgcgg caggagccga actttgcacc
    19981 ccaattaatt gccagccgtc atcggtatgc aacatcagag gcgaaccgct gtcacccggc
    20041 aaggtatcgc actgatgtga catcaccgac gtttgcgccc agccagtcac ttcacagttt
    20101 tgatgactgt acaacgtatc gagatgatct tcagggtatc ctgcctgagt cactttacga
    20161 cctgccgctt tcaatgcggc ggtaagcgcg gctttatctc cctcaaataa cggcaacggc
    20221 gtaatgccag aagggggatt acgtagcaca atcaatccga agtcccacgg cgcggctgcg
    20281 ggaggtacaa tccaaccatc cccatctgct tttaaccgct ttcccagtgt cggatcaacg
    20341 cggccttcta tgtcgtggat ctcatagcgc caaagacctt tatttgacac aaaacgcagc
    20401 gccactgctt tatcggcttt accctttgga ggtgtcaata aacagtgtcc tgccgttaat
    20461 gccagattgg gtgcaatcag cgtcgccgta cataaattgc cgctggccgt ttccagttgc
    20521 ccaaccgcat cccacggtga ttgggtcgtg tcattcactg gcacacgatc atcatgacca
    20581 aaaaacaggg tgctgacctc atcgtttgcc gatttggcaa cgtctggttt atctgcaaac
    20641 acaaaagcag acgtcaaact aattgcaccc aacactacag caatggttgt acgcatatca
    20701 cactctggtg ggtaattatg attattaaaa gcaaaccctc ataaatacta tagacgggac
    20761 gggatgaaag tgggagtaaa atcagataac tacagtcagg aaagataaaa acgggcggca
    20821 atcagtgcgc ataaaataag gatgataaga atgaactcaa agcgataacg gcccaccata
    20881 ctaccctccg ctaaaggcgg tgctaaacgt tatccgctta gcaccgtaat tttcaggcgc
    20941 gagggggcgc gccagcatta ctgttgaaaa cttaggctgc gggttgtgca gcaggttttg
    21001 ccggttgctg atggctgtgt ttcccggcgt gtttcttcgc tgcctgcgct ttttgttcag
    21061 gggctttctg ttcagctttc gtatttttat gatgcttttt agccgcctgc gctttctggg
    21121 caggtgctgc tttatgctgt tttttatgat gtgtagtttt cgccggcgct gctttggtgg
    21181 tcgtcgcagt cggagcaggt gtggtcgcag tctctgcagc aaaggcggca gaagacagac
    21241 ccatagcagc ggcaacaacc agagctaata cttttttcat tgtcataccc tcaatttgtt
    21301 ttttcattta accccactgc ggggccgttg aaataactat atccctggga atggcagact
    21361 tccgtgagtg gttggtttca gcgtgtaacg atatgtacaa acgctgaata aattacagcg
    21421 ttgataataa cgtattgtga cttaagggaa atttagctac caataatagt agtcttgatc
    21481 gggttaacta ttttactact tacaaagcgg tagaataact gcgcatcagt aataaatgac
    21541 acacagcaaa atgaatccgt ttatttgggt acttataatc ctgatgacgc tagacgcgct
    21601 gcgggaattg gctggcgctt cgtctatttt aggatggcta ttaacgttgg tttgagcagg
    21661 caataagtcc ggacgggtat ttaccgcagt ccggacttat ttttcaggcg tgcagacgac
    21721 gatgcaaacg cgtcccgacc agcagagcaa tgaccagcat cagagcaata aatgcgccga
    21781 cgccgttcca gccatagtta tgccagaaaa caccacccag cgtcccggca atactcgatc
    21841 ccagatagta actgaacaga tacagcgagg aggcctggcc tttagcgcgt tttgcgcggg
    21901 ggccgatcca gctgctggca actgagtggg ctgcgaagaa tcctgctgag aagagtaaca
    21961 ttccggcaaa gatcagccac agcgagctaa ataaggtcat cagtaaacca aatagcataa
    22021 ctcccgtcga aaacaacatc accggaccgc gcccatagcg ggtggtcatg gttccggctt
    22081 tgggtgagct ccatgtaccg gtcaaataag ccagcgataa taagccaacc acggcctgac
    22141 tgacatgcca gggggagagc atcaaccgat agccgatgta attaaacagc gtgacgaacg
    22201 accccatcag caaaaagcct tctgcgaaca ataacggtaa tccccggtca cgccagtgca
    22261 gacgaaagtt gataaacaac gtcttagggc gcagcgaagt cgggcgaaaa tggcgtgatt
    22321 cagggaggat tttccagaac atcaacgccg aggccagcga gaaacaaccg attgccgcca
    22381 gagcaattcg ccagttgaaa aagtccgtga agacaccact aattaagcgt ccgctcatgc
    22441 cgccaattga gttgccgctg atatacaacc ccatcgaaaa ggccacgaaa ctggggtgga
    22501 tttcctcgct aagataagtc atgccaacag ctgccacgcc acttaacgaa agcccaatca
    22561 aggcgcgcat aatcaaaatg ccgtgccagc tggtcatcat tgtcgaaagt aacgtacaaa
    22621 tggaggccaa cagtagcgcc gtgaccatca ctggtttgcg accaatggca tcggataggg
    22681 ggccagtaaa cagcaaacca atagccaaca tcgccgtgga aatggacagt gaaatactac
    22741 tgttcgcggg cgttaagcca aactcctgcg aaagcaccgg aaggataggt tgcacacaat
    22801 agagaagtgc gaaggttgcc agtccggcag agaacagcgc cagggtgacg cgcataaatt
    22861 gcggcgtacc gcgtttaata aattgatttg gctgagaaat gctttgcttg tcagtgtcgc
    22921 ttgccggagc gccatcaaca gttgtagtac ggctcacttg aaatccttgc taaatatgcc
    22981 tgtggatcag gcttatacat agggtaggaa aatcgaattg ttctgtctaa tatattaata
    23041 atctcaaata agatgtttta aatatgaata ttgaacttcg tcatctgcgt tactttgttg
    23101 ctgttgcgga agagctgcat ttcgggcgcg ccgctgcccg cctgaatatt tcgcaaccgc
    23161 cgctaagtca gcagattcag gcgctggagc aacaaattgg tgcccgactg ctggcacgaa
    23221 ccaatcgcag tgtattgctg acggcagcag gaaaacagtt tcttgcagat agtcggcaaa
    23281 tcctgtctat ggtggatgac gctgccgctc gcgctgaaag gctgcatcag ggtgaagcgg
    23341 gggagttgcg tattggtttt acttcgtccg ctccttttat tcgggcggtg tccgatacgt
    23401 tatcgctgtt tcgccgtgat tatcctgatg tccatttaca aactcgcgaa atgaacactc
    23461 gtgagcaaat cgctccgctc attgaaggaa cgctggatat gggattgctg cgtaacacag
    23521 cgttaccgga gacgcttgaa cacgcagtca tcgtccatga accgcttatg gcgatgatcc
    23581 cgcacgatca tcccctggca aataacccga atgtaacgct ggctgaactg gcgaaagaac
    23641 cctttgtctt ttttgatccg cacgtcggga cagggctgta tgacgatatt ctcggactga
    23701 tgcgacgtta ccatttgacg cccgtcatca ctcaggaggt gggcgaggca atgaccatca
    23761 tcggtctggt ttccgccggt ctgggtgttt caattttgcc tgcttcattt aaacgtgttc
    23821 agctcaacga aatgcgctgg gtgccgattg ctgaagagga tgcggtttct gaaatgtggt
    23881 tggtctggcc gaaacatcat gaacaaagtc cagctgcgcg taactttcgt attcatctgc
    23941 tgaatgctct caggtgaggg aaatttcagc gaaaaagccc gaaaaatgtg ctgttaatca
    24001 catgcctaag taaaaatttg acgacacgta ttgaagtgct tcaccatagc ctacagatta
    24061 tttcggagcg cgaaaatata gggagtatgc ggtggttgct gaaaaccagc ctgggcacat
    24121 tgatcaaata aagcagacca acgcgggcgc ggtatatcgc ctgattgatc agcttggtcc
    24181 agtctcgcgt atcgatcttt cccgtctggc gcagctggct cctgccagta tcactaaaat
    24241 tgtccgtgag atgctcgaag cacacctggt gcaagagctg gaaatcaaag aagcggggaa
    24301 ccgtggccgt ccggcggtgg ggctggtggt tgaaactgaa gcctggcact atctttctct
    24361 gcgcattagt cgcggggaga ttttccttgc tctgcgcgat ctgagcagca aactggtggt
    24421 ggaagagtcg caggaactgg cgttaaaaga tgactcgcca ttgctggatc gtatcatttc
    24481 ccatatcgat cagtttttta tccgccacca gaaaaaactt gagcgtctaa cttcgattgc
    24541 cataaccctg ccgggaatta ttgatacgga aaatggcatt gtacatcgca tgccgttcta
    24601 tgaggatgta aaagagatgc cgctcggcga ggcgctggag cagcataccg gcgttccggt
    24661 ttatattcag catgatatca gcgcatggac gatggcagag gccttgtttg gtgcctcacg
    24721 cggggcgcgc gatgtgattc aggtggttat cgatcacaac gtgggggcgg gcgtcattac
    24781 cgatggtcat ctgctacacg caggcagcag tagtctcgtg gaaataggcc acacacaggt
    24841 cgacccgtat gggaaacgct gttattgcgg gaatcacggc tgcctcgaaa ccatcgccag
    24901 tgtggacagt attcttgagc tggcacagct gcgtcttaat caatccatga gctcgatgtt
    24961 acatggacaa ccgttaaccg tggactcatt gtgtcaggcg gcattgcgcg gcgatctgct
    25021 ggcaaaagac atcattaccg gggtgggcgc gcatgtaggg cgcattcttg ccatcatggt
    25081 gaatttattt aacccacaaa aaatactgat tggctcaccg ttaagtaaag cggcagatat
    25141 cctcttcccg gtcatctcag acagcatccg tcagcaggcc cttcctgcgt atagtcagca
    25201 catcagcgtt gagagtactc agttttctaa ccagggtacg atggcagggg ctgcgctggt
    25261 aaaagacgcg atgtataacg gttctttgtt gattcgtctg ttgcagggtt aacatttttt
    25321 aactgttcta ccaaaatttg cgctatctca atttgggcca ggaaagcata acttagactt
    25381 tcaaggttaa ttattttcct ggtttatatt tgtgaagcat aacggtggag ttagtgatgc
    25441 tgaagcgttt ctttattacc ggtacagaca cttctgtagg gaaaacggtg gtttcccgcg
    25501 cattgctaca agcgttagcc tcccagggaa aaacggttgc gggatataaa cccgtagcga
    25561 aggggagcaa agagacaccc gaagggctgc gtaataaaga tgccctggtg ttgcagagtg
    25621 tttcaaccat cgaactgcct tatgaagcag ttaatcctat cgcgttaagc gaagaagaaa
    25681 gtagcgtggc gcacagttgc ccaatcaatt acaccctcat ttcaaacggc ctggcaaacc
    25741 tgaccgataa agtcgatcat gtcgtggtag aagggactgg cggctggcgc agtctgatga
    25801 atgatttgcg tccactctct gaatgggtgg tgcaggaaca actgccggtg ttgatggttg
    25861 tcggtattca ggaaggttgc attaaccatg cactgctaac agctcaggcg attgccaacg
    25921 acgggctgcc actcattggc tgggtggcta accgaatcaa tccaggactg gcgcattatg
    25981 cggaaatcat tgatgtgctt ggtaaaaaac ttccggcacc gctcattggt gaactgcctt
    26041 atctgccgcg cgccgaacag cgtgaactgg gacaatacat ccgcttagct atgctgcgca
    26101 gtgtgctggc ggtagataga gtcacggtgt aacgtccgcg agattaccga cgcaattacg
    26161 caggcaatca ataaaccggg gagtagctga tactccccgg tcatttcaca tatcatcaac
    26221 gtcgacataa tcggcgcgtg cgtggttgcc gccaacagtg tcgccatccc ggtcaatccg
    26281 agtaaaagtg taatttcttc gccatcaggg aaccataatc ccaggctacg accatacaac
    26341 atgccaatgg caagaccgat aaatagcgtc ggtgtaaaga ccccaccggg tgcgccggaa
    26401 ccgctactcg ccagcacggc acacagttta caaaggaaga tcccggcaat gatcattaac
    26461 agtggtgggg cggttaaaaa ggattgtacg gtgctatagc cgttgcccca cactgcaggt
    26521 gtgaacaggg aaagcagacc cacgatcaac ccgcctagtg ccagttgcca gggcggcgca
    26581 agtttgagac tcacaaatcc acgatgacag gcgttcatta acgttaacaa cagtggtccg
    26641 cacagacctg ccagcacacc tgtactgata atcagcgcat agtcacgagc ctgaaccgtc
    26701 actgagagtt gtacgttgta gagtaacgcg tcgctatgat taatcagatt gctaaccagc
    26761 aatgccacga cggcggaaat aatcaccggg ccgagagagg ccaacatcat agtgccaaac
    26821 agcacttcgg ctataaataa actgccagca agcggggcac gataggccgc agccattccc
    26881 gccgcggccc cacaggcgat ccataatttc cactcctggc gtggcgtaaa acgttgggca
    26941 aaacaggagg cggcaagggc agctaaaaga atcatcgcac cttcgcgacc aattgcactg
    27001 ccgctggtta ctaccagcag agaggcaagc gatttaacca ggcttgctgc gtaatcgaac
    27061 tgtccatcgg tttgcaacgc ttccatgtaa tcggtcggcg catgagggcg ttgttgggta
    27121 aatttctgcc agcccatcag caacaaaccc gccgccagtc cgccgagcgc cggagttagc
    27181 aaccgtcgcc agggggaaag gtttgtcgct gcattgacca gactgccgga gtcattattg
    27241 aggaacaacc actccagtag cagcatcgca tgacgaaacc cggcaacggc aaaggccgcg
    27301 agaataccga cgactgttgc gataagcaga cggcggaaca tagtgcgcag atccggatag
    27361 atgtgtagat gatgcatgag cagaaatggg caatgaaaca cgggcgacta ttttgcggca
    27421 aaagaggcca gccgcaaaag cagtgcgtgc tttaagagat aaaaaaaacg tgacactgta
    27481 acctattatt gccggattgc gcgtaatcgt caccatccgg caatattacg gtgatcctat
    27541 cgaaacagcg gtttaaccgc gacaggaatt aacagttgtg attgccattg cgccagcgtt
    27601 aagcgagcca gttcacccag tgcacggtag aaagggtgtt ctgctttttc gataaaaaca
    27661 tcaagaaaac gtgttgacca cggaaaaagg tgccatgcca gcaattcttc gcattctgtc
    27721 tggcgaccat tttccgccaa ccacgcagcc atcaacagca gtgaaccaaa atgatcttcc
    27781 ggttcgtttt gcttcatttc aaactgaatg cctttctcgc gcatccactg acgaagtgcc
    27841 aatgttgaat cgccaaacag cacagattcg cgatccagcc agaccgaccc ccacggcgga
    27901 gacggcagtg cccacgggcc gacaaacaaa cgctgccagg cctgggcgtg agtctcttca
    27961 cactgtgtct gaaaagccgt caccagcggc gctaatgacg cttctggtag aggccactga
    28021 gtttcccagc cgtcactggt gagtaccgca accagaggtg cggcttccgc actctctgga
    28081 gcgtaataaa acagcgcgcc caacacgcgc gccgcgacag aaaaattatc ttgctgtgaa
    28141 aaatgggtca ttcctaacat cctgaaatgt gcgggttgcc ccgcaccaat ttgttaacct
    28201 gcaatagcca ttcctactgt catgtgcagg ccataaaaga gcacacgccc gatcatctca
    28261 ccgccaagta tgaggattag ccccagaata agtccggcaa cgtgaggttc acggcgacga
    28321 atgagcgggc aaagccagca tccaagacct gcgcataaca ataccacacg ccagacctgt
    28381 aaggaggcgt aatctggtac cagtgcgctg gcttgttgca cggatgagtg aatagacgcc
    28441 agagacaaac cttgcagcac aatcaccccg gcacaagcga tcagcgccag aacgctaatg
    28501 atggcaaatg gtgtggtatt aaatgtaacg cgggctgccc gtagaattgc ggcagcaagt
    28561 attggaccgc tcaacaatac cgtcaggaag aaagccagcg tagtgtaacc gttatgccag
    28621 gttggcacag tgtcgatttg atacacgcag gtcatcatcc agacgaaaat gacgccgagc
    28681 gccatgctga caagtaacca gagtttcccc aacgcttgcg gcattttacc gatgaccgcc
    28741 accagccacc ataatccgcc aacggcaaaa aatatggaac cggcagcaat ctcgttactc
    28801 agaccagaag ctccgattcg attcagcgag ttaaacgccc gcagtggcga tcccaggtgc
    28861 atgacagagg caataaaccc gatgcccatc aacagccaga ggaaaaacat gccacgaaca
    28921 atgtgctgac ggtctgcgtc atttttggcg gcgaaccagc caattccgct aacaatcagc
    28981 gcgcctacta cgcattgacc caatacggta aagataacca gtggccattc atgccatcca
    29041 tttcccattt tacacttcct ccggattagc cagataacca gtggtatcgc cggtcgggcg
    29101 gctgttggcg ttaggtttga taacgatatt gggttttgtg aaatgcgcgc gcggcagtgg
    29161 cgcgacggca gcaagagtac cgtgcttctg gcgcagctct tcaattggac cgaactcaag
    29221 tgcacgcagc gggcaggatt cgacacatat gggttgtttc ccctcggcga cgcgcgaata
    29281 acaaccatcg cacttcgtca tgtgtccttt ttcagcattg tactgtggcg cgccgtacgg
    29341 acaagccatg tggcagtagc ggcaaccgat acaaacatct tcatcaacca ccacaaagcc
    29401 atcttcacgc ttatgcattg cgccgctggg gcagactttt gtacatgcgg ggtcatcgca
    29461 atggttacag gagatggaga gataataagc gaacacgttc tggtgccaga cgccattatc
    29521 ttcctgccag tcgccgccag catattcata aatacggcgg aaactgactt ccgggccaag
    29581 atctttaaaa tctttgcacg ccagttcgca ggttttacag ccagtacagc ggctggaatc
    29641 gataaaaaat ccatattgtg tggtcatggg ctactcctta aaccttttcg atctggacaa
    29701 gattgctgtg cgacgggttt ccctttgcca gcggtgaagg gcggtgagag gtcagaatat
    29761 tgatactgcc gccgtgatcg acccggtcac caaacatatc cgctttaagc cacgcacctt
    29821 gcccgatggc ggtaacgcca ggcagaatac gcggagtcac ttttgcggca atcagcattt
    29881 ctccattatt gttaaatacc cgcacggtat cgccatgacg gataccgcgt gcctgagcat
    29941 caatggggtt gatccacacc tcttgtgggc aggcctgctg taacacatca atattgccgt
    30001 agctggagtg ggtacgcgct ttgtagtgga agcccgttaa ctgcagtgga taggttttcc
    30061 gcaggggatc gtcccagcca tcaaaacctg gggtatacgc aggaagggga tgaataattt
    30121 catctttttt caattcccag gtatctgcaa tcttcgccag tcgttcagaa taaatttcga
    30181 ttttccccga aggtgttttc aacgggtttg cctgtggatc ttcacggaat gcgcggaaag
    30241 cgacgtagtg ttcttccggg cattttttct taaagatccc ggtcgttttc atctcctcgt
    30301 agtcgggcat ctcagggtta cgttccttcg ttttcgcatg gagatatttg atccattcat
    30361 gctgactgcg accttcagta aaggtttgat aaacgtctgg tcctaagcgt ttggcgactt
    30421 cactcagcat ccagtagatg ggtttgcgtt caaattttgc tgaggttgcg ggttgggcga
    30481 ggatcacata gcccatattc cctgcagatt catgagagat aaggtcttct tgctctgttg
    30541 gcatcaggtc gggcaacagg atatcgcaat acttagccga ggccgtcatg aagtggtcaa
    30601 tgccaacaat catctcgcac ttgctgtcat cctgaagcac ctcatgggtg tgattgatgt
    30661 cgccatgttg attgatcaat gtgttactgg cgtagcacca taaaaacttg atggggacat
    30721 ccagtttttc ttttccacga acaccatcac gggtcgcggt catttccgta ccatggtcga
    30781 tggcatctgt ccatgtaaag acggaaatct gcgttttaac aggattctca agcatcggga
    30841 accattctac ccccagatcc cagctacctt cgcgtacacc tgagttgccg ccgtttatgc
    30901 cgacgttacc ggtgagaacg gaaagcatgg caatagcgcg ggacgtttgc tcgccgttgg
    30961 aatgtcgttg tggcccccaa ccctgacaaa tataagcagg ttttgctgaa ccgatctctc
    31021 gcgccaactg gataattttt tctgccggga tgctggtgat ttttgctgcc cattccggcg
    31081 ttttagctat gccgtcaggc ccttcgccca gaatataggc tttataatgc gcgttacgtg
    31141 gtgcgttggc gggcagcgtt ttttcatcgt aaccaacaca atatttgtcg agaaatggct
    31201 gatcgaccat gttttcagta atcagtaccc aggcaatcgc acaggccagt gcgccatcgg
    31261 tgccagggcg aatgggcagc cattcatctt cacgcccggc agcagtgtcg ttataacgtg
    31321 gatcgatgac gatcatgcgt gcgtttgaac gttcgcgggc ttgctcgacg tagtaagtga
    31381 caccaccgcc gctcatccgc gtttctgccg ggttatttcc gaacataacg accagtttcg
    31441 tattggcgat atcatccggg ctgttgccat cattggcacc gaacatataa ctcattgcgg
    31501 cactgatctg tgcggtactg tagctgccat agcgactgag aaaaccaccg caagagttca
    31561 tcagacggta cgggacgttt gagttggtga tgtttccgcc atctacgcct gttccgtaca
    31621 ggacatgtac agcctcattg ccgtaatctt tcaggatccg ccgaagatta tcactgatgg
    31681 tatccagggc ttcgtcccaa cttatccgtt caaatttacc ttcaccgcgc ttgccgacgc
    31741 gcttcatggg atatttcaac ctatcaggat gattcatccg tcggcggata gagcgcccgc
    31801 gtaaacacgc tcgaacctga tgattaccgt agacgtcgtc acctgtcgta tcagactcca
    31861 cccagtacac ggtgtcatct ttcacatgca aacgtaacag acagcggctc ccgcagttaa
    31921 cggtgcagga actccagacc gctttctctt ctaccggagc ctctgccgcc cggaccattt
    31981 gggaaaatgg cagagtgaaa gcactgcttg ccagcgcgag actgccaagt gcggaggttt
    32041 tcatcagact tctacggctg atttcagcct tcatgagcgc ctctgtggta tggattttca
    32101 tcattactca cttattgctt ttcaaacaaa atgtcatgcc agaatttatg gttgtagtgg
    32161 gttatatttt ttcgatctcg accagattag tgtgctgcgg gtttcccttc gccagtggtg
    32221 aagggcgcag agtggttagc gtattcacac agccgccatg gtcgatttta tcgccagaca
    32281 tattggcctc gtgccaggct ccctggccca tagcgctaac tccagggaga atacgtggtg
    32341 tcactttggc tggtagccga acttcgccac gatggttaaa cacccgcacc atatcgccgt
    32401 tggcaatccc acgtttctgc gcatctatag ggttgatcca cacctcctga cggcaggctg
    32461 ctttcaggac atcaatgttg ccgtaggtcg agtgagtacg ggatttgtaa tggaaaccaa
    32521 acagttgcag tgggaaggtt ctacgttcag gggagttcca gccttcaaag gttgaggcat
    32581 aaactggcaa tgggcttatc acttcatctt tttccagttc ccaggtacgg gcaatttccg
    32641 ccagcctgct ggaataaatt tcaatcttac cggaaggcgt tttaagtgga tttgcctcgg
    32701 ggtcgtcacg aaatgctttg taggcgacaa aatggccatt gggatcttta cgcttataga
    32761 tacccatttt tttcagttcg tcgtaagacg gtaacgccgg atctttggca agcattttgg
    32821 cgtacagatg ttgtaaccat tgttcctgcg tgcgaccttc tgtgaacttt tgatagacgt
    32881 caggtccaag acgtttcgcg acttcactca ggatccagta aatcggtttg cgttcgaatt
    32941 tttcgctggt gacaggctgg aggaaaatga gatatcccat gttaccggcg tagtcgttag
    33001 gaataatatc ttcctgctca acggtcatca ggtctggcag cagaatgtcg gcatattttg
    33061 ccgatgaggt cataaagttt tcgatgatca caatcatttc gcatttcgat tcgtcctgca
    33121 gaatttcatg cgttttgttg atgtcagaat gctgattaac gagggtattt cccgcgtagt
    33181 tccagatgaa cttaatgggc acatccagtt tatctttgcc gcggacgccg tcgcggattg
    33241 ccgtcatttg cggaccatga tcgatagcat ctgtccagct gaagcaggag attgacgttt
    33301 tgaccggatt atccagcacc ggcaggcgtt ctatggtaat ggtataggtc gattcacgcg
    33361 cgccactatt tccgccgctg atgccgacat tgcccgtcaa aataggtaac atagcaatag
    33421 cgcgtgcagt cagttcgccg tttgcctggc gttgcggccc ccagccctgg cagatataag
    33481 cgggttttgc tgtgccaatt tcacgcgcca gtttgatgat acggtctacc gggataccgg
    33541 taatttgcga agcccactgc ggcgttttcg ctgtgttatc atcaccttca ccaagaatat
    33601 aggctttata gtgaccattt ttgggtgcat ctgcgggtaa ggttttttcg tcatagccga
    33661 cgcagtattt atcgagaaaa ggttgatcaa cgagattttc gttaatcaat acccaggcaa
    33721 tacccgcaac cagcgcggca tcggtgcccg ggcgaatagg gagccattca tcttcacgac
    33781 cagcagccgt atcggtatat cgcggatcga taacaatcat tttggcgttc gatttctcgc
    33841 gcgctttttc aagaagataa gtgatgccac cgccgctcat gcgggtttct gccgggttgt
    33901 taccaaacat cacgaccagc ttgctgtttt caatatccgt ggtgctgttg ccatcattac
    33961 tgccgtaggt gtagggcatg gcacaggaaa tttgcgcggt gctgtaggag ccatactgat
    34021 tgagtgaacc gccgtagcag ttcatcaggc gtttgaccgc cgaggctgat ggcgaagagc
    34081 gggtcatatt gccgccaaca atccccgaag agtactgaat atatacagcc tcattgccat
    34141 attgttcgac ggtttttttc aggctactgg cgatagtatc cagggcttca tcccagctaa
    34201 tccgttcgaa tttgccttca ccgcgtgtac ccacgcgttt cattgggtaa ttcaagcgat
    34261 cgggatgatt aatacgccgg cggatggagc gaccgcgcaa acaggcgcgt acctgatggt
    34321 tgccgtactc atcgctgccg gtattgtcag tttccaccca ggtcacttca ttatctttaa
    34381 catgtagacg aagtgcacag cggctaccac agttgacgga acaggcaccc cagatcactt
    34441 tttcgctggc ctgttgtacc gttgccgctg cactgcgcag ggtgaacggt aaagaaaaac
    34501 cgcctgcagc cagcgccaga gaacctatcg cggttgattt aacgagtgtt ctgcggctga
    34561 tgcccaccat tcggtcattt ttggacataa ctcactccct gttctttatc gttatataaa
    34621 tgtttatata ttgaatattt agcgcgctaa caatagaggg agtctaccca ttttgggtta
    34681 agaattatta atccatatca atagaagggt atgagtaata aggtgggatt atgttgtatg
    34741 ttcaaatcgc cggatgtgtc gtatccggcg ttcagtcgat aatgtattac tgcggttcgg
    34801 caggcgcgcc atcctgggta gactgcgcgg gagcagagac gttaccgctg gtggtgcggg
    34861 tatagagaat tttatgcgta tcattagcgc aatggccgac gacctgggaa tcaggctgat
    34921 caacctggtc attgggtaca atacttaacg tgaagctgct ttcgggtacg ccattattga
    34981 taatgcgctg tgatatatcg ctctgtatgc gctcacagga tcccggcgcg gcgagtacca
    35041 cgggtgaggc gagggcgagc agaagcgcgg cacagcaggt tgagagtttc atcataagct
    35101 ccttacgcga agataacttc tttaagcata gcatttaacg tgtaaagtac tgtatttgct
    35161 actatgattg agaatcatct ctactctctg gtgactgttg tgaaatacaa attactacca
    35221 tgcttactcg cgatattcct cacaggatgt gaccgcacag aggtaacact ttcatttacc
    35281 cctgagatgg ccagtttctc taatgaattc gattttgatc cgctgcgtgg tccggtaaaa
    35341 gatttcactc agacattaat ggatgagcaa ggtgaagtga cgaaacgtgt ttctgggact
    35401 ttgtcggaag aaggctgttt tgattcactc gaattactgg atctggaaaa taataccgtg
    35461 gtcgctctgg tactggacgc caattattac cgtgatgccg agacgctgga gaagagagta
    35521 cgtttacagg gaaaatgcca gctagcagaa ttaccttctg ccggggtgag ttgggaaacc
    35581 gatgataatg gcttcgtgat taaagccagc agcaaacaaa tgcagatgga atatcgctat
    35641 gatgatcagg gttatccgct gggtaaaacc acgaaaagta acgacaaaac attatctgtc
    35701 agcgccacgc catcaacgga tccgatcaaa aaattagatt acacagcggt tactttactg
    35761 aataatcaac gggttggtaa tgtaaaacag agctgtgaat atgacagtca cgctaatccg
    35821 gtggactgtc agctaatcat tgttgatgaa ggagtaaaac ccgccgtcga acgggtttac
    35881 accatcaaaa atacgatcga ttattattaa tgctattgtg cggtcggctt caggagagtc
    35941 tgacccggtg ttttgtgctc tgccagatac tgatgctgga atatacacat gcgaatggca
    36001 ttacgatatt gaccattaat aaagaactcg tgcatcaatt caccttcaac cgaaaagcca
    36061 agcttgcggt aaatgtgaat cgctttttca ttctctttat caacgatcag atacagctta
    36121 tagagattga gaacggtaaa gccatagtcc attgctaatt tggcggcacg ggttgccaga
    36181 cctttcccct gatactccgg ggagataatt atctgaaatt ctgcgcggcg atgaacatgg
    36241 ttaatttcca ccagctccac cagaccggct ttttcgccgt cacattccac cacaaagcgc
    36301 cgttcgctct gatcgtgaat atgcttatca tacagatcag agagttcaac aaaggcttcg
    36361 tagggttcct caaaccagta acgcatcaca ctggcgttgt tgtcgagttg atgtacatag
    36421 cgtaaatctt cacgctccag cgggcgtagc ttaacactgt gggcgcttgg cataacgtgt
    36481 ccttacattc cttaaatcaa taacaggtta gggggtaata acgcggccag ttcgacggtc
    36541 caggcagcgc aaagtattgg gctcccagta ggcattgatg ttggcgcttt gctcacattt
    36601 atcgcggtta tcaaaagcgg cgtcggcttt atcccactct ttttcagtgc gtttattcac
    36661 tttctggcgc agattgcgcg tgtcattcca ttgctctttt tccatagcgg cgtgctggcg
    36721 gctttgtgca ctgtcgccag actcaatcac cagtttgtta gtttcggcat gaacagttgt
    36781 gctcaatgcc agtgcgcaag acagcagaat agcgagcagg ccgattcgtt tgctgagagt
    36841 gattttcata attcattccc tgtatgaatg attaaaggtg attctacacc atccactgcg
    36901 gacgcaaaac gtaccaggag ggtgtttata ttgatgatat tatgtcgccc tataactata
    36961 catgatgtca ataagagaca aagatgatta aaacaacgtt actatttttt gctactgcgc
    37021 tgtgtgaaat tattggatgc tttctgccct ggttgtggtt aaaacgaaac gccagtatct
    37081 ggctgttgct tccggcgggg atttcactgg cgctgtttgt ctggttgtta acgttgcatc
    37141 cagcggcgag tgggcgtgtt tacgcggctt atggtggcgt ttatgtctgc acggcgttga
    37201 tgtggctgcg cgttgtggat ggcgtgaaac tgactcttta tgactggacg ggtgcgttga
    37261 ttgcgctttg cggcatgttg atcattgttg cgggctgggg gcgcacgtag gaacataaat
    37321 ccattttatc aataagataa gaggaagtgt cagctgacaa aaggtattct atttcatctt
    37381 ttgtcaacca ttcacagcgc aaatatacgc ctttttttgt gatcactccg gcttttttcg
    37441 atctttatac ttgtatggta gtagctcagt tgcgtagatt tcatgcatca cgacaagcga
    37501 tgcaaggaat cgaacatgaa gatcgtaaag gctgaagttt ttgttacctg tccggggcgt
    37561 aatttcgtca cattaaaaat caccactgag gacggtatta cgggccttgg ggatgccacc
    37621 ctcaatggac gtgagctttc cgtggcctct tatttgcagg atcacctttg tccgcagctt
    37681 attggtcgcg atgcgcaccg tatcgaagat atctggcagt ttttctataa aggtgcttac
    37741 tggcgtcgcg gtccggttac gatgtcggcc atttcagcgg ttgatatggc gctgtgggat
    37801 attaaagcca aagctgccaa catgccgctt taccagttac tcggcggcgc gtctcgtgaa
    37861 ggggtgatgg tttattgcca taccaccggt cacagtattg atgaagctct ggatgattat
    37921 gcccgtcatc aggagctggg attcaaagcc atccgcgtgc agtgcggaat ccctggtatg
    37981 aaaaccacct acggcatgtc gaaaggtaaa ggtctggctt atgaacccgc aaccaaagga
    38041 cagtggccgg aagagcagct gtggtcgacg gagaaatacc tcgatttcat gccgaaattg
    38101 tttgacgcgg tacgtaacaa gtttggtttt aatgaacatt tgctgcatga catgcaccat
    38161 cgcttaacgc ctattgaagc ggcgcgcttt ggtaaaagca ttgaagatta tcgcatgttc
    38221 tggatggaag acccgacgcc tgcagaaaac caggaatgct tccgtctcat tcgccaacat
    38281 accgtcacac ccatcgcagt gggtgaagtc ttcaacagca tctgggactg caaacaactg
    38341 attgaagagc aactcatcga ttatatccgc accacgctga cccatgcagg cggaattacc
    38401 ggtatgcgcc ggattgccga ttttgcttcg ctgtatcagg tacgtactgg ctcacacggt
    38461 ccttccgatt tgtcaccagt ctgcatggct gcagcgctgc actttgatct gtgggtcccc
    38521 aatttcggtg tccaggaata catgggttat tccgaacaaa tgctcgaagt cttcccgcac
    38581 aactggactt tcgataacgg ctatatgcat ccgggagaca aaccgggtct tggcatcgaa
    38641 ttcgatgaaa agctggcggc gaaatatccc tatgaacctg cttatctgcc agtcgcacgt
    38701 ctggaagatg gcacgctgtg gaactggtaa ggagtaaggt aatgaaaagc attttaattg
    38761 aaaaaccgaa tcaactgtcg attatcgaac gtgaaatacc caccccgtca gcgggtgaag
    38821 tacgagtaaa agtgaaactt gccggaattt gtggttcaga tagccatatt taccgtgggc
    38881 ataatccttt tgcgaaatat ccgcgcgtca ttggtcatga attctttggc gtcattgatg
    38941 cggtgggtga aggtgtggaa agcgccagag tcggtgaacg cgttgctgtc gatccggtgg
    39001 tcagctgtgg gcattgctat ccgtgctcta taggtaagcc gaacgtttgt acgacacttg
    39061 ctgtattagg tgtgcacgct gacggtggtt tcagtgaata tgccgtggtt ccggcaaaaa
    39121 atgcgtggaa aattcctgaa gcagtggccg atcaatatgc ggtgatgatc gaacctttta
    39181 ccattgcggc taacgttacc ggtcatggtc aaccgactga aaatgatacc gttctggttt
    39241 atggtgccgg tccaatcggc ctgacgatcg ttcaggtatt aaaaggcgtc tataacgtta
    39301 aaaatgtgat tgttgccgat cgcattgatg aacgactgga aaaagcgaaa gagagcgggg
    39361 cagactgggc gattaataac agccagacac cgcttggcga gattttcgct gaaaaaggca
    39421 tcaagccgac attaattatc gatgcggctt gtcatccttc tatcctgaaa gaggccgtaa
    39481 cgctggcttc tccagcggca cgtattgtat tgatgggctt ctccagtgaa ccgtctgaag
    39541 tgattcagca aggaattacc ggaaaagaac tctctatttt ctcttcacgc ttaaatgcaa
    39601 ataaatttcc ggttgttatc gactggttaa gtaaagggtt aattaaacca gaaaaattaa
    39661 ttacccatac gtttgatttc cagcatgttg ctgatgccat tagtttattt gaacaggatc
    39721 aaaaacattg ctgcaaagtc ttgctcactt tttctgaata ataccaataa cggcgagtaa
    39781 gtagtacgca tcttacctct tttttagaga taaccattat gacaatagaa aaacatgaaa
    39841 gaagcactaa ggatttgg
//
LOCUS       DAPGWB010000024        39804 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.024, whole genome shotgun sequence.
ACCESSION   DAPGWB010000024 DAPGWB010000000
VERSION     DAPGWB010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 39804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39804
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.024"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(378..668)
                     /locus_tag="RHX79_001255"
     CDS             complement(378..668)
                     /locus_tag="RHX79_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000356400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2196450.1"
                     /translation="MDKALFERLTHSMAQMNEIIEGTRQPSRTFEVDAMKIKEIRRAS
                     GLSQSKFADLISVSVDTLRNWEQGRRSPTGPAKALLRAIANDPQHVLQALNR"
     gene            complement(669..980)
                     /locus_tag="RHX79_001256"
     CDS             complement(669..980)
                     /locus_tag="RHX79_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000897300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDV2196451.1"
                     /translation="MLFIETEIFTEDVQKLLTDDEFSRFQFFLALNPDYGEVIPETGG
                     LRKVRWVSGGKGKRAGVRVIYFHQVKHYEIRLLLIYRKGIKDDLSPQEKAMLRLLNTR
                     W"
     gene            1209..2117
                     /locus_tag="RHX79_001257"
     CDS             1209..2117
                     /locus_tag="RHX79_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001296611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV2196452.1"
                     /translation="MALEKGIAELVEKFIAAGRPSSRQQSIAQRREGYIASAVLAGET
                     ETRVDIQTIELEGMTLRIVSPLNAPTLLPTIIYYYGGCFVSGGFATHDNQLRQLAYYG
                     QCRVIAVQYRLAPEHTFPAAHDDAQRGAEIVWQHAERLGVDKQRITLAGDSAGGHLAL
                     VTALRLKRAGEWQPAQLILIYPMLDATAHFESYIRNGHDYIITRDTLLSGFEMYLPGI
                     ERRHPEASPLWRDDFNGLPPVHIITAEYDPLCDEGEALYHRMTGQGVQCTCQRYLGVI
                     HGFFQLGGISEAARSALRDVAWRAGR"
     gene            complement(2181..3122)
                     /gene="fabY"
                     /locus_tag="RHX79_001258"
                     /gene_synonym="yiiD"
     CDS             complement(2181..3122)
                     /gene="fabY"
                     /locus_tag="RHX79_001258"
                     /gene_synonym="yiiD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid biosynthesis protein FabY"
                     /protein_id="HDV2196453.1"
                     /translation="MYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAH
                     HQMVVDEQGNLVAVGRLYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGV
                     KRVTCSAREDAVEFFAKLGFINQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQ
                     LQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWG
                     LIWLMLRERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQM
                     QVEIFGDETPGAVFEGTYIVLPAKPFGPYEEGGNEEE"
     gene            complement(3167..3604)
                     /gene="dtd"
                     /locus_tag="RHX79_001259"
     CDS             complement(3167..3604)
                     /gene="dtd"
                     /locus_tag="RHX79_001259"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000560980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HDV2196454.1"
                     /translation="MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANR
                     LCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRA
                     EALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV"
     gene            complement(3601..4473)
                     /locus_tag="RHX79_001260"
     CDS             complement(3601..4473)
                     /locus_tag="RHX79_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
                     /protein_id="HDV2196455.1"
                     /translation="MLKTIQDKARHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSL
                     LSLVPLVAVVFALFAAFPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNKMT
                     AVGACGLIVTALLLMYTIDSALNTIWRSKRARPKIYSFAVYWMILTLGPLLAGASLAI
                     SSYLLSLRWASDLNTVIDNVLRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAA
                     LLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYR
                     KLKQAAEQEEDDEP"
     gene            complement(4467..5066)
                     /gene="yihX"
                     /locus_tag="RHX79_001261"
     CDS             complement(4467..5066)
                     /gene="yihX"
                     /locus_tag="RHX79_001261"
                     /EC_number="3.1.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709685.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphatase"
                     /protein_id="HDV2196456.1"
                     /translation="MLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAF
                     HQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHR
                     VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD
                     TVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC"
     gene            complement(5165..5950)
                     /locus_tag="RHX79_001262"
     CDS             complement(5165..5950)
                     /locus_tag="RHX79_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418320.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDV2196457.1"
                     /translation="MSLTELTGNPRHDQLLMLIAERGYMNIDELANLLDVSTQTVRRD
                     IRKLSEQGLITRHHGGAGRASSVVNTAFEQREVSQTEEKKAIAEAVADYIPDGSTIFI
                     TIGTTVEHVARALLNHNHLRIITNSLRVAHILYHNPRFEVMVPGGTLRSHNSGIIGPS
                     AASFVADFRADYLVTSVGAIESDGALMEFDVNEANVVKTMMAHARNILLVADHTKYHA
                     SAAVEIGNVAQVTALFTDELPPAALKSRLQDSQIEIILPQEDA"
     gene            complement(5984..6880)
                     /gene="yihV"
                     /locus_tag="RHX79_001263"
     CDS             complement(5984..6880)
                     /gene="yihV"
                     /locus_tag="RHX79_001263"
                     /EC_number="2.7.1.184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418319.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfofructose kinase"
                     /protein_id="HDV2196458.1"
                     /translation="MIRVACVGITVMDRIYYVEGLPTESGKYVARNYTEVGGGPAATA
                     AVAAARLGAQVDFIGRVGDDDTGNSLLAELESWGVNTRYTKRYNQAKSSQSAIMVDTK
                     GERIIINYPSPDLLPDAEWLEEIDFSQWDVVLADVRWHDGAKKAFTLARQAGVMTVLD
                     GDITPQDISELVALSDHAAFSEPGLARLTGVKEMASALKQAQTLTNGHVYVTQGSAGC
                     DWLENGGRQHQPAFKVDVVDTTGAGDVFHGALAVALATSGDLAESVRFASGVAALKCT
                     RPGGRAGIPDCDQTRSFLSLFV"
     gene            7048..7944
                     /gene="yihU"
                     /locus_tag="RHX79_001264"
     CDS             7048..7944
                     /gene="yihU"
                     /locus_tag="RHX79_001264"
                     /EC_number="1.1.1.373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfolactaldehyde 3-reductase"
                     /protein_id="HDV2196459.1"
                     /translation="MAAIAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKG
                     ATPAANPAQAAKDAEFIITMLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQT
                     DKLIADMQAKGFSMMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELIN
                     SGGPGMGIRVKLINNYMSIALNALSAEAAVLCEALNLPFDVAVKVMSGTAAGKGHFTT
                     SWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYSQARAAGRGR
                     QDWSAILEQVRVSAGMTAKVKM"
     gene            7968..8846
                     /gene="yihT"
                     /locus_tag="RHX79_001265"
     CDS             7968..8846
                     /gene="yihT"
                     /locus_tag="RHX79_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfofructosephosphate aldolase"
                     /protein_id="HDV2196460.1"
                     /translation="MNKYTINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSV
                     LTDFKVNAAKALSPYASAILVDQQFCYRQVVEQNAIAKSCAMIVAADEFIPGNGIPVD
                     SVVIDRKINPLQIKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEP
                     VVRPPRRGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGPQQELLCASQRLNDHI
                     NMPWVILSSGVDEKLFPRAVRVAMTAGASGFLAGRAVWASVVGLPDNELMLRDVCAPK
                     LQQLGDIVDEMMAKRR"
     gene            8863..10104
                     /gene="yihS"
                     /locus_tag="RHX79_001266"
     CDS             8863..10104
                     /gene="yihS"
                     /locus_tag="RHX79_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoquinovose isomerase"
                     /protein_id="HDV2196461.1"
                     /translation="MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKE
                     EMGTHLWITARMLHVYSVAAAMGRPGAYSLVDHGIKAMNGALRDKKYGGWYACVNDEG
                     VVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDE
                     AFSKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNE
                     HFDTQWNPLPDYNKDNPAHRFRAFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLE
                     DAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGD
                     RQYETWYQTWWEYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPR
                     IPLAPGMAPAVAAGLLDINAK"
     gene            10242..11144
                     /locus_tag="RHX79_001267"
     CDS             10242..11144
                     /locus_tag="RHX79_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709679.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose-1-epimerase"
                     /protein_id="HDV2196462.1"
                     /translation="MQITNMHCSGQTVSLAAGDYHATIVTVGAGLAELTFQGCHLVIP
                     HKPEEMPLAHLGKVLIPWPNRIANGCYRYQGQEYQLPINEHSSKAAIHGLLAWRDWQI
                     SELTATSVTLTAFLPPSYGYPFMLASQVVYSLNAHTGLSVEIASQNIGTVAAPYGVGI
                     HTYLTCNLTSVDEYLFQLPANQVYAVDEHVNPTTLHHVDELDLNFTQAKTIAATKIDH
                     TFKTANDLWEITITHPQQALSVSLCCDQPWVQIYSGEKLQRQGLAVEPMSCPPNAFNS
                     GIDLLLLEPGKPHRLFFNIYGQRK"
     gene            11343..13379
                     /gene="yihQ"
                     /locus_tag="RHX79_001268"
     CDS             11343..13379
                     /gene="yihQ"
                     /locus_tag="RHX79_001268"
                     /EC_number="3.2.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoquinovosidase"
                     /protein_id="HDV2196463.1"
                     /translation="MDTPRPQLLDFQFHQNNDSFTLHFQQRLILTHSKDNPCLWIGSG
                     IADIDMFRGNFSIKDKLQEKIALTDAIVSQSPDGWLIHFSRGSDISATLNISADDQGR
                     LLLELQNDNLNHNRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQ
                     TYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALW
                     EDKATLRFECADTYISLLEKLTALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMR
                     NAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSENYPQLDSRIKQWNQEGVQFLAYI
                     NPYVASDKDLCEEAAQHGYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKK
                     NMIELGCGGWMADFGEYLPTDTYLHNGISAEIMHNAWPALWAKCNYEALEETGKLGEI
                     LFFMRAGSTGSQKYSTMMWAGDQNVDWSLDDGLASVVPAALSLAMTGHGLHHSDIGGY
                     TTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFARMTSVFT
                     TLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHTYTLKYQYLLGRDILVAPVHEEGRS
                     DWTLYLPEDNWVHAWTGEAFRGGEVTVNAPIGKPPVFYRADSEWAALFASLKSI"
     gene            13425..14810
                     /locus_tag="RHX79_001269"
     CDS             13425..14810
                     /locus_tag="RHX79_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196464.1"
                     /translation="MSHITTEDPATLRLPFKEKLSYGIGDLASNILLDIGTLYLLKFY
                     TDVLGLPGTYGGIIFLISKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFILYASFPVTL
                     LAIANFVGTPFDVTGKTVMATILFMLYGLFFSMMNCSYGAMVPAITKNPNERASLAAW
                     RQGGATLGLLLCTVGFVPVMNLIEGNQQLGYIFAATLFSLFGLLFMWICYSGVKERYV
                     ETQPTNPAQKPGLLQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDP
                     ILLSYMGFFSMGCIFIGVFLMPGAVRRFGKKKVYIGGLLIWVLGDLLNYFFGGGSVSF
                     VAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGF
                     FPGWMLTQIGYVPNVAQADHTIEGLRQLIFIYPSALAVVTIVAMGCFYSLNEKMYVRI
                     VEEIEARKRTA"
     gene            14853..16256
                     /locus_tag="RHX79_001270"
     CDS             14853..16256
                     /locus_tag="RHX79_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196465.1"
                     /translation="MSDHNPLTLKLNLREKIAYGMGDVGSNLMLCIGTLYLLKFYTDE
                     LGMPAYYGGIIFLVAKFFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIAT
                     LQFIATTFCLPVKTTIATALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQG
                     GATIGLLICTVAFIPLQSLFSDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTAP
                     TGHKASILKSFCAIFRNPPLLVLCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWM
                     GFFSMGCILVGVLLVPVTVKCFGKKQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCV
                     AFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFFRKISAALAGFLPGIML
                     TQIGYVPNIAQSDATLQGLRQLIFIWPCALAIIAALTMGFFYTLNEKRFALIIEEINQ
                     RKNKEMATEEKTASVTL"
     gene            16324..17016
                     /gene="ompL"
                     /locus_tag="RHX79_001271"
     CDS             16324..17016
                     /gene="ompL"
                     /locus_tag="RHX79_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpL"
                     /protein_id="HDV2196466.1"
                     /translation="MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVG
                     YNFDMGAGIMLTNTYTFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGS
                     GGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKF
                     SYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINENWLPYFELRWLDRNVEPYHRE
                     QNQIRIGTKYFF"
     gene            complement(17107..18372)
                     /locus_tag="RHX79_001272"
     CDS             complement(17107..18372)
                     /locus_tag="RHX79_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196467.1"
                     /translation="MLTKKKWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQ
                     IGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFV
                     WALFGVTCDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWF
                     GSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDKEEAPSVEVKKEDGASQNTSMASVLRD
                     KTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINQYCLKMIGGPIGG
                     MISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAV
                     FFAPIGEAKIAENKTGAAMALGSFIGYAPAMFCFSLYGYILDLNPGIIGYKIVFGIMA
                     CFAFSGAVVSVMLVKRISQRKKEMLAAEA"
     gene            complement(18474..19454)
                     /locus_tag="RHX79_001273"
     CDS             complement(18474..19454)
                     /locus_tag="RHX79_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HDV2196468.1"
                     /translation="MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIA
                     SENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAV
                     AIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHE
                     LVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLG
                     HKACISGQGDMPFKALLTHLICLGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIP
                     YRQMSETPLPENHLLDARLRKEKEDAINQINHVRNVLQQIKQEANHLLNH"
     gene            complement(19462..20172)
                     /locus_tag="RHX79_001274"
     CDS             complement(19462..20172)
                     /locus_tag="RHX79_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTRA domain-containing protein"
                     /protein_id="HDV2196469.1"
                     /translation="MTGNQSTVENAKEKLDRWLKDGITTPGGKLPSERELGELLGIKR
                     MTLRQALLNLEAESKIFRKDRKGWFVTQPRFNYSPELSASFQRAAIEQGREPSWGFTE
                     KNRTSDIPETLAPLIAVTPSTELYRITGWGALEGHKVFYHETYINPEVAPGFIEQLEN
                     HSFSAVWEKCYQKETVVKKLIFKPVRMPGDISKYLGGSAGMPAILIEKHRADQQGNIV
                     QIDIEYWRFEAVDLIINL"
     gene            complement(20389..22212)
                     /gene="typA"
                     /locus_tag="RHX79_001275"
     CDS             complement(20389..22212)
                     /gene="typA"
                     /locus_tag="RHX79_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-dependent GTPase TypA"
                     /protein_id="HDV2196470.1"
                     /translation="MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMD
                     SNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAF
                     DGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDF
                     PIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYV
                     GVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAI
                     TGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDR
                     LNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREI
                     DGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIG
                     FRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRG
                     KLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLE
                     QALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRAPKDD"
     gene            22585..23994
                     /gene="glnA"
                     /locus_tag="RHX79_001276"
     CDS             22585..23994
                     /gene="glnA"
                     /locus_tag="RHX79_001276"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--ammonia ligase"
                     /protein_id="HDV2196471.1"
                     /translation="MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFF
                     EEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYD
                     RDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWN
                     SSTQYEGGNKGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAG
                     QNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLS
                     KNGVNLFAGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLA
                     YSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEA
                     MDKNLYDLPPEEAKEIPQVAGSLEEALNELDLDREFLKAGGVFTDEAIDAYIALRREE
                     DDRVRMTPHPVEFELYYSV"
     gene            24313..25362
                     /gene="glnL"
                     /locus_tag="RHX79_001277"
     CDS             24313..25362
                     /gene="glnL"
                     /locus_tag="RHX79_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HDV2196472.1"
                     /translation="MATGTQPDAGQILNSLINSILLIDDNLAIHYANPAAQQLLAQSS
                     RKLFGTPLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDG
                     MILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALP
                     DPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNV
                     RLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGER
                     YRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTS
                     WPGHTEFSVYLPIRK"
     gene            25374..26783
                     /gene="glnG"
                     /locus_tag="RHX79_001278"
     CDS             25374..26783
                     /gene="glnG"
                     /locus_tag="RHX79_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HDV2196473.1"
                     /translation="MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALA
                     SKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYL
                     PKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
                     SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFT
                     GANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRI
                     IAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELG
                     VEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAE
                     STSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAR
                     LLGWGRNTLTRKLKELGME"
     gene            26895..27005
                     /locus_tag="RHX79_001279"
     CDS             26895..27005
                     /locus_tag="RHX79_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YshB family small membrane protein"
                     /protein_id="HDV2196474.1"
                     /translation="MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS"
     gene            complement(27195..28568)
                     /gene="hemN"
                     /locus_tag="RHX79_001280"
     CDS             complement(27195..28568)
                     /gene="hemN"
                     /locus_tag="RHX79_001280"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312816.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDV2196475.1"
                     /translation="MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQA
                     VARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAG
                     RHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLR
                     AEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT
                     PESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAF
                     LTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD
                     CYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQW
                     DLHFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYLRQKARM
                     QQFSRVI"
     gene            complement(28757..29266)
                     /gene="yihI"
                     /locus_tag="RHX79_001281"
     CDS             complement(28757..29266)
                     /gene="yihI"
                     /locus_tag="RHX79_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HDV2196476.1"
                     /translation="MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGS
                     RAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELL
                     ETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQE
                     DMMRLLRGN"
     gene            29848..30480
                     /locus_tag="RHX79_001282"
     CDS             29848..30480
                     /locus_tag="RHX79_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDV2196477.1"
                     /translation="MTNLNYQQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALN
                     TLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEY
                     LEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLN
                     MVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQPVEETQDGE"
     gene            complement(30862..33648)
                     /gene="polA"
                     /locus_tag="RHX79_001283"
     CDS             complement(30862..33648)
                     /gene="polA"
                     /locus_tag="RHX79_001283"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDV2196478.1"
                     /translation="MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLN
                     MLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAM
                     GLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL
                     GPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP
                     EKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELL
                     GLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTIL
                     DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA
                     PDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN
                     SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL
                     HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL
                     EKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP
                     KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR
                     NEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE
                     VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV
                     LEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII
                     KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL
                     LVEVGSGENWDQAH"
     gene            34012..34944
                     /locus_tag="RHX79_001284"
     CDS             34012..34944
                     /locus_tag="RHX79_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HDV2196479.1"
                     /translation="MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVK
                     LLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICN
                     HRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWALDMPFMKRYSRAYLLRH
                     PERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIA
                     MALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYIN
                     DKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQDK"
     gene            complement(34985..36415)
                     /locus_tag="RHX79_001285"
     CDS             complement(34985..36415)
                     /locus_tag="RHX79_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HDV2196480.1"
                     /translation="MIHKSATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKK
                     KGEHAYDMTLSYKNFDKGFFNSRFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPI
                     TMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAP
                     AEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLE
                     EKKFPVGESESKFNQINIINHGEDVAQIDAFVAKTMLDRVKDKDYINVNLTYELDKLT
                     KGNQQLGSGEWSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPELANDEVALQEVNAAL
                     FKEYLPLLQKSEPTIKQPVKWKNALGELNANLDISIADPAKSSSSTNKDIKSLNFDVK
                     LPLNVATETAKQLNLSEGMDAEKAQKRADKQISGMMTLGQMFQLITIDNNTASLQLRY
                     TPGKVVFNGQEMSEEEFMSRAGRFVH"
     gene            complement(36570..37196)
                     /gene="dsbA"
                     /locus_tag="RHX79_001286"
     CDS             complement(36570..37196)
                     /gene="dsbA"
                     /locus_tag="RHX79_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA"
                     /protein_id="HDV2196481.1"
                     /translation="MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEF
                     FSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALG
                     VEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKA
                     AADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKK"
     gene            complement(37213..38199)
                     /gene="srkA"
                     /locus_tag="RHX79_001287"
     CDS             complement(37213..38199)
                     /gene="srkA"
                     /locus_tag="RHX79_001287"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response kinase SrkA"
                     /protein_id="HDV2196482.1"
                     /translation="MNNSAFTFQTLHPDTIMDALFEQGIRVDSGLTPLNSYENRVYQF
                     QDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFY
                     FAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF
                     EDATLMPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMFVDL
                     DDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVY
                     YLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY"
     gene            complement(38276..38545)
                     /locus_tag="RHX79_001288"
     CDS             complement(38276..38545)
                     /locus_tag="RHX79_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HDV2196483.1"
                     /translation="MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELAD
                     LTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE"
     gene            38615..39199
                     /gene="mobA"
                     /locus_tag="RHX79_001289"
     CDS             38615..39199
                     /gene="mobA"
                     /locus_tag="RHX79_001289"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HDV2196484.1"
                     /translation="MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALM
                     TQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDT
                     PYIPEDLAARLNHQRKDAPVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAF
                     MRLAGGHAVDFSDNKDAFINVNTPEELARWQEKR"
     gene            39181..39708
                     /gene="mobB"
                     /locus_tag="RHX79_001290"
     CDS             39181..39708
                     /gene="mobB"
                     /locus_tag="RHX79_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418293.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HDV2196485.1"
                     /translation="MAGKTMIPLLAFAAWSGTGKTTLLKQLIPALCARGIRPGLIKHT
                     HHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKL
                     DLILVEGFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVE
                     GLADFVVEWMQKQNG"
BASE COUNT         9806 a        10125 c         9685 g        10188 t
ORIGIN      
        1 gattggatct ttatttgcat aatctgaatg gtgtacccga aaaatgtcag catcctaaca
       61 gcacccggat ttaaggtgaa attaatcatc catcacagac cggtcagtac tgccaccaac
      121 cggtctttac ttgctcatcg ttataatttt gttggtaaca gttcgggaaa caaggaattc
      181 cttccggaac cccccggtat catccgatag cattgacgtc aatcatcagc gcgacgatga
      241 gtttttttaa tcgcatcata gggtggcgac gttcagcacg attacgggtc atagcaaaac
      301 tcctgggcag gcgaccacta tgccgctttc acaggagttc tgaatgctag tgctttctgt
      361 atggcataac catgcctcta acggttaagt gcttgcagca catgttgcgg atcattggca
      421 atcgctcgca gcaaagcctt tgcaggcccg gtcggtgaac gtcgcccctg ctcccagtta
      481 cgcaacgtgt ctacgcttac agaaataaga tcggcaaatt tagattgtga caaccctgaa
      541 gcgcggcgta tttctttgat tttcatagca tcaacttcaa aagtccgcga aggctgtcgc
      601 gttccttcaa taatttcatt catctgggcc atgctgtgag tcaaccgctc aaaaagtgcc
      661 ttatccattt accacctcgt atttaacaac cggagcattg ctttttcctg gggagacaga
      721 tcatctttaa tacccttacg ataaataagc agtaatctga tctcataatg tttaacctga
      781 tgaaaataaa taaccctgac accagcacgt ttcccctttc ctcctgaaac ccatcgaacc
      841 tttcttaacc caccagtttc aggtattacc tcaccatagt caggattcaa ggccaggaaa
      901 aactgaaaac gactgaattc atcgtcggtc agcagttttt gaacatcttc agtaaaaatt
      961 tccgtttcga tgaagagcat aattatacgc cattggctta gagtaacaat cctttttgta
     1021 cgtcattgac gtacccttga aaccactagc ttactgatag tgctccagca aaaccacgtc
     1081 tctgccgggt ttgtctttag atttgcgagg cgctttccag atttttcacg cccgtgaatt
     1141 tccctgtatc catccagcaa aaacgggtgt ataagactgt acattcatac agcaaaataa
     1201 gttctactat ggcactggaa aaaggaattg cagagttagt cgaaaagttt atcgctgcgg
     1261 gtcgcccctc atcgcgtcaa caaagtattg cgcagcgcag ggagggctat atcgccagcg
     1321 ctgtccttgc gggtgagaca gaaacgcggg tagatattca gactatcgaa cttgaaggga
     1381 tgaccttacg aatagtgtcg ccgctgaatg ccccgacatt actcccgacg ataatttatt
     1441 actacggtgg ctgttttgtt agcggcgggt tcgcaactca cgacaaccag ctgcgccagt
     1501 tagcctatta cgggcaatgt cgggttattg ccgtccagta tcggctggca ccggaacata
     1561 ctttccccgc cgcccatgat gatgcgcaac gaggtgcaga aatagtctgg caacacgccg
     1621 aacgactcgg cgttgataaa caacgtataa ctcttgccgg tgacagtgcg ggcggacatc
     1681 tggcgctggt aactgctttg cgattaaagc gtgctggcga gtggcaaccg gcacaactca
     1741 tcttaattta tcctatgctt gatgcgactg cgcatttcga aagctacata cgcaatggtc
     1801 acgattacat catcacacgc gacactttac tgagcggctt tgagatgtat ctgccaggca
     1861 ttgaacgcag gcatcctgaa gccagccctc tttggcgcga tgatttcaat ggcttgccac
     1921 ctgtacatat cattaccgct gaatacgacc cactttgcga tgaaggtgaa gcgttgtatc
     1981 accgcatgac agggcaagga gtgcaatgca cctgccaacg ctaccttggc gttatccacg
     2041 gattttttca gttaggtggt atcagcgagg ccgcgcgatc ggcactacgg gatgttgcct
     2101 ggagagcggg aaggtaactt cggacctggg ccctgaaaag gttttcagat tgaaaacctt
     2161 ttcagtcaag taaaacgccc ctactcttct tcgttcccgc cctcttcata cgggccaaat
     2221 ggcttcgcgg gcagaacgat atacgtgcct tcaaacactg cacccggcgt ctcgtcgcca
     2281 aagatttcaa cttgcatctg cacccgtgct tttcgtccgc gcgccagacg gtcgagatcg
     2341 ccgcttaagg caccaaggtc ggctaccgca tgaggtttac cgctaatcgg cttgctgtag
     2401 cggatatgcg catccgccag aataatcgtt ccgccgagat ggcgttcgcg cagcatcagc
     2461 cagataagcc cccaaccggt gagcgttgcc agtgagaata aactcccggc aaacagcgta
     2521 tggtgcggat tctgattacc ggtttccggc atggtggtga taaatttttg cccggtatat
     2581 tgttgaatac gcacgcccat tttttcacta agcgggatat gttcgtacca cgcctgttgc
     2641 agctgcgcgc accagtcgcc gcgatgcaaa atatcatcca gagtggcaac gggtttaatc
     2701 atcaaaaaat ggcgaatcgg cgtggtagtt ggggtggtga tctccccctg attaatgaat
     2761 cccagcttgg cgaaaaactc taccgcgtct tcacgggcgc tacaggtcac gcgcttaacg
     2821 ccttcctgac gcgccaccga ctccagggtc atcgccatca gcgtgcctaa ccctttgtcc
     2881 tgcacgtccg ggtgaacggc cataaagcga atggacgctt cattgtcggc attaatatac
     2941 aatcggccta ccgccaccag attaccctgc tcgtcgacga ccatctggtg atgcgccatc
     3001 gcatcccacg cgtcgcgttc cgaacctttt ggttgatgca ggggcttacg caacatttcc
     3061 cagcgaaact gatagtaacg ctctaattct tcttctgttt gtggaacccg aaggtgatac
     3121 atagcgatac tctctcttgt ttcccgtgac aaccctggaa gctggctcat acctgcaacc
     3181 agaatgtcac ggggccatca ttgaccagcg atacctgcat atccgcagcg aagcgtcctg
     3241 tttgcgtgtt catctcttgc tgacggcagc gttcgacgaa atagtcatat aacgcctctg
     3301 cgcgatccgg tgatgcacct ttggagaaac ttgggcgcat cccccgttcg gtatctgcgg
     3361 cgagggtaaa ctgggaaacc accagcacac tgccgcccgc ctgttgcacg ttgagattca
     3421 tcttgccttc ggcatcgcta aagatgcggt agccgagcac acgctcgcac agacggtttg
     3481 ctttctgttc gtcgtcatcc ttttcgacac ccaataacac caaaagtccc gcgccaattt
     3541 cgcccgtcac ttctccctcc acggtgacgc tggcacgggt tacgcgttga attaatgcaa
     3601 tcatggttcg tcgtcttctt cttgttcagc agcttgtttt agtttgcggt attccccgag
     3661 agtgacagta atttccgcgc caagcaagac gatacaccat gtccagtaga cccagacaaa
     3721 gagaatgggg atcaccgcca gcacaccgta aatgagctga tatgacggga acatggtgat
     3781 ataaagcgcg aaacctttct ttcctgcttc gaacaggagt gcagcaacaa acgcgccgac
     3841 aatcgcgtcg cggttaggta cgcggatggt aggaacaatg ctgtacagca accagaagga
     3901 gatccacgac aacagcagcg gaaaaatacg cagcacgttg tcgatgacag tattgagatc
     3961 gctcgcccag cgcagggaga gcaaatagga actgatcgcc agactagccc ctgccagcag
     4021 cggccccagc gttaaaatca tccagtacac ggcaaacgag taaatttttg gtcgcgctcg
     4081 tttactgcgc cagatggtat tcaacgcgct atcgatggtg tacatcaaca ataacgcggt
     4141 gacgatcagc ccgcacgcgc caacggcggt catcttgttg gaattggcaa caaattgttc
     4201 gatataccgc tgaataacat cgccagtagc aggcagaaag ttggcaaaaa taaagtgacg
     4261 caactgaatg ctgacgtcgg aaaacatggg aaaagcggcg aaaagcgcaa aaacaacggc
     4321 aaccagcggc actaatgaga gcaacgacac ataggcaagg ttacctgcca gggttgtcat
     4381 gttgtcctca tcaatacgtt gccagagtag ttttagccag gcccatagtg gacgggtacg
     4441 gtgcctggct ttgtcctgaa tggtttttag cataacacct tcgcgaaata gtccgggatg
     4501 gtggttttat ctttcaccag aatactggta atgcccagct gattggctcc ttctatatta
     4561 tcggcgttat cgtcgaaaaa gaccgtatcg ctgggtgaaa aaccttccgc ctgcaaaaca
     4621 tgctggtaaa ttcgtgcttc aggtttgcgc atccccagat cttgcgacag atagatatgg
     4681 tcagcagcat cacgaatttc cgggtattct tccggccaga aggtggtatg caggcggttg
     4741 gtattggaaa gcaccaccac gcgatgcccc tgctcacgca gtttatgcat gatggcgatc
     4801 acttccgggc gcagcgcaac aaacaccgcc tgccagccgt gagagaactg ctcgtagctt
     4861 agcggtagag ccatctcatg acacagcgcc tctgcgaacg cttcgtcgct aatttcccca
     4921 cgctcatgct gatgaaacgc ctcccccata tgaaaactct tcttaagcga tgccagcgga
     4981 atacgcgtta aatcgctcca ggctcccagc acacggttaa agtcgatatc gacaatcaca
     5041 ttacctaaat caaagatata gagcattttt gcctcctttc gcgccacaag aaattaactg
     5101 tagcgggaaa ggatgggttt ggctatgtgg caaggtatga agccaggtta acggtcacaa
     5161 aaatctacgc gtcttcctgg ggaagaatga tttcaatttg gctgtcttgt aagcgtgatt
     5221 ttagcgcagc gggcggcagc tcgtcggtaa agagcgcagt gacctgtgcc acgttaccaa
     5281 tttcaaccgc cgccgaagca tgatacttag tgtgatcggc gaccagcaga atatttctcg
     5341 cgtgcgccat catcgttttc accacgttag cttcgtttac atcaaactcc atcaacgcgc
     5401 catcgctctc aatcgcccca acgcttgtta ccagataatc agcacgaaaa tcagccacaa
     5461 aggacgccgc tgaagggcca atgatcccgc tattatgaga gcgcaacgta ccgccgggca
     5521 ccatcacttc aaagcgcggg ttgtggtaaa gaatatgcgc cacacgcagg ctgttggtga
     5581 ttatccgcaa atgattatgg ttaagtaacg cccgggcaac atgctcaaca gtcgtaccaa
     5641 tggtgataaa tattgttgaa ccatcaggaa tatagtctgc caccgcttcg gcaatcgctt
     5701 ttttttcctc ggtttgcgaa acctcacgct gctcgaacgc cgtattaacg acgctggaag
     5761 cccgacccgc gccaccgtga tggcgcgtaa tcaggccttg ctcgcttaat ttacgaatat
     5821 cccggcggac cgtctgcgtg gagacatcca gcagatttgc cagctcatca atattcatat
     5881 acccacgctc ggcgatcagc atgaggagtt ggtcgtgccg cgggttaccg gttagttcgg
     5941 taaggctcat gaaaattcct cgaaaaacca tcaccctggc attttataca aaaagtgaca
     6001 aaaaagatcg ggtttgatca cagtcaggga tcccggctcg tccaccggga cgtgtgcatt
     6061 ttaacgccgc tacaccgctg gcgaagcgga ctgactccgc taaatcccca cttgttgcca
     6121 gcgccaccgc caaagcgccg tgaaaaacat cacccgcacc tgtggtatct accacatcaa
     6181 ctttgaaggc cggttgatgc tgacgcccac cattttccag ccagtcgcag cctgcgctac
     6241 cctgggtcac atagacatga ccatttgtga gcgtttgtgc ctgttttagc gcactggcca
     6301 tctctttcac gcccgttaag cgcgccagac ccggttctga aaaggccgcg tgatcgctta
     6361 atgccaccag ctcactgata tcctgcggcg taatgtcccc gtccagaacg gtcatcacac
     6421 ccgcctgacg ggccagggtg aaggcttttt tagcgccgtc gtgccagcgt acatctgcca
     6481 gcacaacatc ccactgagag aaatcaattt cctccaacca ctctgcgtca ggcagcagat
     6541 ccgggctggg gtagttaatg attatccgct cgcctttggt atccaccatg atggcggatt
     6601 gcgaagattt cgcctggtta taccgtttgg tgtaacgggt gttaacgccc caggattcca
     6661 gctctgccag caggctgttg cccgtgtcgt catcacctac gcgaccaata aaatcgacct
     6721 gcgcccccag ccttgccgcc gcaaccgctg ccgtcgccgc tggcccgcca ccaacttccg
     6781 tataatttct cgccacgtat ttaccgctct ccgtcggtaa cccttccacg taatagatgc
     6841 gatccatcac ggttatacct acacaagcaa cacgaatcat ggtcattcct taaacatttt
     6901 gggatgcgtt cattttaatt tcaccaattg tttaaaaagt gacggctgtc aattttttga
     6961 cgataaatta caaatacgat caaaaacaga caagcaaagc atgtcataaa tgacaaaaag
     7021 tgacatcact gtattcagga gagggttatg gcagcaatcg cgtttatcgg tttaggacaa
     7081 atgggttcgc caatggcgag caatttattg cagcaagggc atcaacttcg cgtctttgat
     7141 gtgaacgccg aagctgtgcg gcatctggta gacaaaggtg cgactcccgc cgccaacccg
     7201 gcgcaggccg ctaaagatgc cgaatttatc attaccatgt tgccgaatgg cgatctggtg
     7261 cgcaacgtgt tgttcggtga aaacggcgtt tgcgaaggct tatctaccga tgcgctggtc
     7321 attgatatgt ccaccatcca tccgctgcaa accgataaat tgattgccga tatgcaagcc
     7381 aaaggcttca gcatgatgga tgttccggta ggccgtactt ctgcaaatgc cattaccggt
     7441 actctgttac tgctggctgg cggcaccgct gaacaagttg aacgtgccac accgatcctg
     7501 atggcgatgg gcagtgagtt gatcaactct ggcggtccgg gcatggggat ccgcgttaag
     7561 ctcatcaaca actacatgag catcgcgctc aatgcgcttt cggcagaagc cgccgttttg
     7621 tgcgaagccc tgaatcttcc cttcgatgtt gccgtcaaag tgatgagcgg taccgccgcc
     7681 ggtaaaggtc acttcaccac ttcctggcca aacaaagtcc tcagcggaga tctttctccc
     7741 gccttcatga tcgatcttgc ccataaggat cttggcatcg cccttgatgt cgccaaccag
     7801 ctgcatgtgc caatgccgct gggggccgcc tcacgggagg tttatagcca ggcgcgcgca
     7861 gcgggtcgcg gtcgccagga ctggtccgcc attctggaac aggtccgtgt cagtgccggg
     7921 atgactgcca aagtaaaaat gtaacgactg gataaaggaa taaatgaatg aataagtaca
     7981 ccatcaacga cattacgcgc gcatcgggcg gttttgccat gctggcggtc gatcagcgcg
     8041 aagccatgcg catgatgttt gccgcggctg gggcacccgc tccggtagcc gatagcgttt
     8101 taactgattt caaagttaac gctgcaaagg ccctctcgcc ttatgcctcg gcgattctgg
     8161 tagatcaaca attctgctac cgccaggtgg ttgagcaaaa cgcgattgcc aaaagttgcg
     8221 ccatgattgt cgccgccgat gagttcattc ctggcaacgg tattccggtc gatagcgtgg
     8281 ttattgaccg caaaatcaat ccgctacaga tcaaacaaga cggtggcaaa gccttaaaac
     8341 tgctggtgct gtggcgtagt gatgaagatg cgcagcaacg tctggatatg gtgaaagagt
     8401 tcaacgaact gtgccactca cacggtctgg taagcatcat tgagccagtc gtccgcccac
     8461 cgcgtcgtgg cgataaattc gatcgcgaac aagcgatcat cgatgccgcc aaagagctgg
     8521 gcgacagtgg cgctgacctc tacaaagttg aaatgccgct ttatggcaaa ggtccgcaac
     8581 aagagcttct ctgtgcttca caacgtctga atgaccatat caatatgcca tgggtgatcc
     8641 tctcttccgg tgtcgacgaa aaactgttcc cgcgtgccgt acgcgtggca atgacggcgg
     8701 gcgcatcggg attcctggca ggccgtgcag tctgggcatc ggtcgtcggt ttaccagaca
     8761 acgagctgat gctgcgtgac gtttgcgcac cgaaattaca acaacttggc gatatcgtcg
     8821 acgaaatgat ggctaaacgc cgctaagatg aggataaaag gaatgaaatg gtttaacacc
     8881 ctaagccaca accgttggct ggaacaggaa accgaccgca tctttgattt tggtaaaaat
     8941 tccgtagtgc cgactggttt tggctggtta ggcaataaag ggcaaatcaa agaagagatg
     9001 ggcacccatc tgtggatcac cgctcgtatg ttgcacgttt attccgttgc tgcggcgatg
     9061 ggtcgacctg gcgcttactc gttggttgat cacggtatca aagccatgaa cggcgcactg
     9121 cgtgataaaa aatatggcgg ctggtatgcc tgcgtgaatg acgagggcgt ggtggatgcc
     9181 tccaaacagg gctatcaaca cttctttgct ctgctgggtg ccgccagcgc cgtcacaacg
     9241 ggtcacccgg aagcgcgcaa gctgctcgat tacaccattg aaattatcga gaaatatttc
     9301 tggagcgaag aagagcagat gtgcctggaa tcctgggacg aagccttcag caaaaccgaa
     9361 gagtaccgcg gcggcaatgc caatatgcac gcggtggaag ctttcttgat tgtttatgac
     9421 gtcactcacg acaaaaaatg gctggatcgc gcgattcgcg tggcttccgt gattatccac
     9481 gacgtcgcca gaaataatca ttatcgcgtt aacgaacact tcgataccca gtggaatccg
     9541 ctgccggatt acaacaaaga taacccggcg catcgcttcc gcgcgtttgg gggtacacca
     9601 ggccactgga tcgaatgggg ccgtttaatg ctgcacatcc atgctgccct ggaagcccgt
     9661 tgcgaacaac caccagcatg gctgctagaa gatgccaaag gtctgtttaa cgccaccgtg
     9721 cgcgatgcct gggcacccga tggcgcggac gggattgttt ataccgttga ctgggaagga
     9781 aaaccggtgg tccgcgaacg tgtacgttgg cctatcgtcg aagcaatggg tacggcctac
     9841 gcgctctaca ccgtcactgg cgatcgccag tatgaaacct ggtatcaaac atggtgggag
     9901 tactgcatta agtacctgat ggactatgaa aatggttcct ggtggcagga gctggatgcg
     9961 gacaataagg tcaccaccaa agtctgggac ggcaaacagg atatttatca cctgctgcat
    10021 tgcctggtga tcccgcgtat cccgttagcg cccggcatgg ctccagcggt tgcagcgggt
    10081 ctgctggata ttaatgcgaa ataactgatc tgaaaatagg gtgcgggttt tcccctcacc
    10141 ctaaccctct ccccaaaggg gcgaggggac cgtccggtgc agtttttggg tttgacatca
    10201 gcctcacggg aggctgtatg tcgttaatta aggtgccttg tatgcaaatc accaatatgc
    10261 attgcagtgg acagaccgtt tcacttgccg cgggggatta tcacgcgacc attgtgaccg
    10321 tcggtgctgg tctggctgaa ttaacctttc agggttgtca tttagtcatc ccgcacaaac
    10381 ccgaagagat gccgctggcg catctgggta aagtgcttat tccgtggccg aaccggatcg
    10441 ccaacggctg ttaccgctat caggggcagg aatatcagtt acccattaat gaacatagtt
    10501 caaaagccgc tattcacggg ctgcttgcct ggcgagactg gcaaattagt gaattaaccg
    10561 ccaccagcgt taccctgaca gcttttctgc cgcccagtta cggctatccg tttatgctgg
    10621 cttcacaagt tgtttattcg ctcaacgcac acacgggtct ttccgttgag atcgcaagcc
    10681 agaatatcgg cactgtcgca gcgccttatg gcgtgggtat tcatacttat ttaacctgca
    10741 acttaacatc tgttgatgaa tatctgttcc agcttccggc aaaccaggtt tatgccgttg
    10801 atgaacacgt aaatccgaca acgcttcacc acgttgatga gctggattta aatttcacgc
    10861 aggcgaaaac aatagccgcg acaaaaatcg accacacctt taaaaccgct aatgatctgt
    10921 gggaaataac cattacccat ccacaacagg cgctttcggt tagcctttgt tgcgatcaac
    10981 cctgggtaca aatttatagc ggtgaaaaat tacagcgtca gggactggca gttgaaccta
    11041 tgagttgccc gcctaacgcc tttaattcag gtatcgactt attattactg gaaccaggaa
    11101 aaccgcaccg cctgtttttt aacatttacg gacagagaaa ataacttgta ttgattagca
    11161 gtcaaaatca ttgaagaaca tttcactcgc taaaggcaac attatgtatc ttcaatttat
    11221 taagttaaaa acagctcagc ttctgtaaag tttttatata tcagttttat gagaatcatt
    11281 ttacataagc ctgtaataac aggaaggcaa caatctcgtt ctcaactcta tggagattag
    11341 ttatggatac gccacgtcca cagttattag attttcaatt tcatcagaat aacgacagtt
    11401 ttaccctaca ttttcaacaa cgtcttattt taacccatag caaagataat ccttgtttat
    11461 ggattggctc aggtatagcg gatatcgata tgttccgcgg taatttcagc attaaagata
    11521 aactacagga gaaaattgcg cttaccgacg ccatcgtcag ccagtcaccg gatggttggt
    11581 taattcattt cagccgtggt tctgacatta gcgccacgct gaatatctct gccgacgatc
    11641 agggccgttt attgctggaa ctacaaaacg acaaccttaa ccacaaccgt atctggctgc
    11701 gccttgccgc tcaaccagag gaccatatct acggctgcgg cgaacagttt tcctacttcg
    11761 atctgcgtgg caaaccgttc ccgctatgga ccagtgaaca aggcgttggt cgcaacaaac
    11821 aaacctatgt cacctggcag gccgactgca aagaaaatgc gggcggcgac tattactgga
    11881 ctttcttccc acagcctacg tttgtcagca cgcagaagta ttactgccat gttgataaca
    11941 gttgctatat gaacttcgac tttagtgccc cggaatacca tgaactggcg ctgtgggaag
    12001 acaaagcaac gctgcgtttt gaatgtgctg acacatacat ttccctgctg gaaaaattaa
    12061 ccgccctgct gggacgccag ccagaactgc ccgactggat ttatgacgga gtaacgctcg
    12121 gcattcaggg cgggacggaa gtgtgccaga agaaactgga caccatgcgt aacgcgggcg
    12181 tgaaggtcaa cggcatctgg gcgcaggact ggtccggtat tcgtatgacc tcttttggca
    12241 aacgcgtgat gtggaactgg aagtggaaca gcgaaaacta cccgcaactg gattcacgca
    12301 ttaagcagtg gaatcaggag ggcgtgcagt tcctggccta tatcaacccg tatgttgcca
    12361 gcgataaaga tctctgcgaa gaagcggcac aacacggcta tctggcaaaa gatgcctctg
    12421 gcggtgacta tctggtggag tttggcgagt tttacggcgg cgttgtcgat ctcactaatc
    12481 cagaagccta cgcctggttc aaggaagtga tcaaaaagaa catgattgaa ctcggctgcg
    12541 gcggctggat ggctgacttc ggcgagtatc tgcccaccga cacttacctg cataacggca
    12601 tcagcgccga aattatgcat aacgcctggc ccgcgctgtg ggcgaaatgt aactacgaag
    12661 cccttgaaga aacgggcaag ctcggcgaga tccttttctt tatgcgcgcc ggttctaccg
    12721 gtagccagaa atactccacc atgatgtggg cgggcgacca gaacgtcgac tggagtctcg
    12781 acgatggcct ggcgtcggtt gtcccggcgg cgctgtcgct ggcaatgacc ggacatggcc
    12841 tgcaccacag cgacattggc ggttacacca ccctgtttga gatgaagcgc agcaaagagc
    12901 tgctgctgcg ctggtgcgat ttcagcgcct tcacgccgat gatgcgcacc cacgaaggta
    12961 accgtcctgg cgacaactgg cagtttgacg gcgacgcaga aactatcgcc cattttgccc
    13021 gtatgacctc cgtcttcacc accctgaaac cttacctgaa agaggctgtc gcgctgaatg
    13081 cgaagtccgg cctgccggtt atgcgcccgc tgttcctgca ttacgaagac gatgcgcaca
    13141 cttacaccct gaaatatcag tacctgttag gtcgcgacat tctggtcgct ccggtgcatg
    13201 aagaaggccg tagcgactgg acgctctatc tgccggagga taactgggtc cacgcctgga
    13261 cgggtgaagc gttccggggc ggggaagtta ccgttaatgc gcccatcggc aagccgccgg
    13321 tcttttatcg cgccgatagc gaatgggcgg cactgttcgc gtcgttaaaa agcatctaat
    13381 cacatccgcc cgtggggaaa ctcatgggca aagggagaac atcgatgagt cacatcacaa
    13441 cggaagatcc agcaacttta cgcctgccct ttaaagagaa actctcttac ggtattggcg
    13501 acctggcctc taacatcctg ctggatatcg gtacgcttta tcttttgaag ttttataccg
    13561 acgttctggg gctgccaggc acctatggcg gcattatctt tttgatttca aaattcttta
    13621 ctgcgtttac cgatatgggt accggcatta tgttggattc ccgacgcaag atcggtccaa
    13681 aaggtaagtt ccgtcctttt attctgtatg cgtcattccc ggtcacctta ctggcgatcg
    13741 ccaactttgt cggcacaccg tttgatgtca ccggtaaaac ggtgatggcc actattctgt
    13801 ttatgcttta cggactgttt ttcagcatga tgaactgctc ctacggcgca atggttcccg
    13861 ctatcaccaa aaaccccaac gaacgcgcct cactggcggc atggcgtcag ggcggcgcta
    13921 cgctgggcct gctgctgtgc acggtgggat tcgtgccagt gatgaatctt atcgagggta
    13981 atcagcaact tggctatatc ttcgccgcca cgctgttttc actgttcggc ctgctgttta
    14041 tgtggatctg ctactcaggc gtgaaagagc gttatgtcga aacccaacca accaatccgg
    14101 cgcaaaagcc tggcctgttg caatctttcc gcgcaattgc cggtaaccgc ccactgttca
    14161 ttctgtgtat tgccaacctc tgcaccttag gggcgtttaa cgtcaagctc gccattcagg
    14221 tctattacac ccagtacgta cttaacgatc ccatcctgtt gtcgtatatg ggatttttca
    14281 gcatgggctg tattttcatc ggcgtgttcc tgatgcctgg cgcagtcaga cgttttggta
    14341 agaagaaggt ctatatcggc ggcctgctga tttgggtgct gggcgatctg ctcaactatt
    14401 tcttcggcgg cggctcggtc agctttgtgg cgttctcctg cctggcgttc ttcggctcag
    14461 cgtttgttaa cagcctgaac tgggcgctgg tttccgacac cgtcgagtac ggcgagtggc
    14521 gcaccggcgt gcgttcggaa ggcacggtct acaccggctt caccttcttt cgcaaagtgt
    14581 ctcaggcgct ggctggtttc ttccccggct ggatgctgac gcaaattggc tatgtgccga
    14641 acgtcgcaca ggctgaccac accattgaag ggttacgcca gttgatcttc atctacccaa
    14701 gcgcactggc ggtagtcacc attgtggcga tgggttgctt ctacagcctg aacgagaaaa
    14761 tgtatgtccg cattgtggaa gagatagaag cccgtaaacg cacggcgtaa taataataaa
    14821 cgacgccctg cggggcgtta taaggagtga ttatgtctga ccataatcca ctgacattaa
    14881 aactgaatct gcgggaaaaa atcgcctatg gtatgggcga cgtcggttcg aatttaatgc
    14941 tctgcatcgg tactctgtat ctcctcaaat tttataccga tgaattaggg atgcctgctt
    15001 actatggcgg gattatcttt ctggtggcga agttttttac cgcgtttacc gatatgctca
    15061 ccggattttt actcgactcg cggaaaaata ttgggcctaa aggcaaattt cgtcccttta
    15121 ttttatatgc agcagttccg gcggcgttaa ttgcaacgct ccagtttatc gccaccacct
    15181 tttgtttgcc ggttaaaacg acgattgcca ccgcgctgtt tatgatgttt ggactttcat
    15241 acagtctgat gaactgctcg tatggtgcga tgatcccggc aattaccaaa aacccgaatg
    15301 agcgcgcgca gctcgcggct taccgccagg gtggtgcaac catagggcta ttgatttgta
    15361 ccgtggcgtt tattccgttg cagtcgcttt tttctgactc aaccgtcggt tatgcctgtg
    15421 cggcacttat gttctccatt ggcggcttta tttttatgat gctgtgctac agaggcgtca
    15481 aagagcatta tgtggacaca gcgccaaccg gacataaagc cagtattctc aaatcttttt
    15541 gcgcgatatt tcgtaatcca ccattgctgg ttttatgcat tgctaacctg tgtactctgg
    15601 cggcatttaa tatcaaactg gcgattcagg tctattacac ccagtatgtg ctgaatgata
    15661 ttaatttatt gtcgtggatg ggattcttca gtatgggatg catcctcgtc ggcgtattac
    15721 tggtgccagt aactgtaaaa tgttttggta aaaaacaggt ttatttagct ggcatggtgc
    15781 tatgggcggt gggtgatata ctgaattatt tctggggaag taactctttc actttcgtca
    15841 tgttctcttg tgtcgccttt tttggcacgg cctttgtaaa cagcctgaac tgggcactgg
    15901 taccagatac cgtagattac ggtgaatgga aaaccggtat tcgtgccgaa ggttctgttt
    15961 ataccggtta taccttcttt cgtaaaattt ctgccgcact tgctggcttc ttgccaggca
    16021 ttatgctgac gcaaattggt tatgttccca acatcgcgca aagcgatgcg acattacagg
    16081 gtttgcgtca gctcattttt atctggcctt gtgcactggc aattattgct gcattgacga
    16141 tgggattctt ttacacactc aatgaaaaac ggtttgcatt gattattgag gaaatcaacc
    16201 aacgcaaaaa taaagagatg gcgacagaag aaaaaacggc ttccgtaacg ttataaatgt
    16261 caatagccgc tatttccatc ctggtgggtg gcggcctccc tacgtttaaa aaatggactt
    16321 attatgaaaa agattaatgc aataatttta ttatcttctc tgacctctgc ctcggtattt
    16381 gctggcgcat acgtcgaaaa cagggaggca tataatcttg cctccgatca gggcgaggtt
    16441 atgctacgtg tgggttataa cttcgatatg ggcgcgggta ttatgttaac caatacctac
    16501 acctttcagc gagaagatga actaaaacat ggctataatg aaattgaagg ttggtatcct
    16561 ttattcaaac caaccgataa attaaccatc cagcccggtg gcttaattaa tgataagagt
    16621 atcggttcgg gtggtgcagt gtatctggac gtcaactata aatttgtacc atggtttaat
    16681 ctgacagtac gaaatcgcta taaccataat aactatagtt caacagattt gagcggggaa
    16741 ctggataata atgacaccta tgaaattggc acctactgga attttaaaat caccgataaa
    16801 ttttcctata catttgagcc acattacttc atgcgagtga atgactttaa tagtagcaac
    16861 gggaaagatc atcattggga aatcactaac accttccgtt accgtattaa tgaaaactgg
    16921 ctcccttatt tcgaattgcg ctggttagac cgcaacgtcg aaccgtacca ccgcgagcaa
    16981 aaccagatcc gtatcgggac gaagtatttc ttctgatgtg aaactgccgg atgcggcgta
    17041 aacgccttat ccggcctacg gttgatacgg ttttcattgg ccggattaag cacatccggc
    17101 cattaattaa gcttcagccg ccagcatctc tttcttacgt tggctaatac gcttaaccag
    17161 cattacggaa accaccgcac cactgaatgc gaagcaggcc ataatgccaa acacgatttt
    17221 gtagccaata atccccggat ttaaatccag aatgtagcca tacagactga agcagaacat
    17281 cgccggagcg taaccaataa agctacccaa cgccatcgcc gcgcctgttt tattttcagc
    17341 aatttttgct tcgccgatag gtgcaaaaaa tacggctcgc tgtgtaaaga ctatcgcgcc
    17401 aaagcccagc gtacatgcca tccctaaata gaccggcata ctttcgtgcg gcagcataat
    17461 caacagtacg agcgcagcgg tactgatgat aaaggtgtag catagatatt tactcggcga
    17521 tttcaggatc ttatctgaaa tcatgccacc aatcggtcca ccaatcattt tcagacagta
    17581 ttggttaatg atgccgtaag cccccaccag cgcaacgggc aatagataga tgtttttcag
    17641 gaatggaatg aagaatgtca ggccacagta aaccgcgtaa acgaagaaga cgttaaaagc
    17701 gataagccag atggttttgt ctctcagcac cgaggccata ctggtgtttt gcgatgctcc
    17761 gtcttctttt ttcacctcaa cggacggtgc ctcttctttg tcattcagga caaagaaaat
    17821 aataatgcct acggcaatca caataaggga atagaaccag atgcctgctt taaaacccaa
    17881 taagccactg ccaaaccagg taaatactgc caacgcagaa aatgccacca cggtatcgac
    17941 aatgccacgc cctgtttcga agaagccaaa caaccgacct tgttgttcgc tattgcccaa
    18001 tcgacttacc gacttgagca agaccggcca gttcatcatg tcgcaagtaa cgccaaatag
    18061 cgcccagaca aagaggatgc cccaataccc cggcattgtc gtcaaataaa cacccagtaa
    18121 tcctgtcgca atgagtgaga atgacatggt gtatctgcgc ggtagtttat cggcaaaata
    18181 aatagacaga aaaaaaccca ctgtcgtgac aaatgagttt accgacatag cattaccaat
    18241 ttgaccattg gtcaaatgga aatattcctg catcgggata taaaacgcat ctttcagcga
    18301 cggtaattta taaattgtac cgccacacaa tgttaataga ctaaataacg cccatttctt
    18361 tttcgtgagc ataacatccc ctaagcgatt tttaaaatca ctgttttaaa ggcaataaga
    18421 taccgaccat tcatatggaa tggttttatt aactgcgtat gagttaaaac ttattagtgg
    18481 ttcagaagat ggtttgcctc ttgtttgatt tgttgtagta cgttacgcac atgatttatc
    18541 tgattaattg catcttcttt ttctttacgt aaccgcgcat ccagtaaatg attttctggc
    18601 aatggtgttt cactcatctg gcgataaggg atccacggat tatcatcttc gtcttcaaag
    18661 cggaacgccg gcgcatagta atcaacctct tcttccaggc catatgccgt cacctgcggc
    18721 tcatcatcac ccaggcatat aaggtgcgtt aataacgctt tgaacggcat atcaccctga
    18781 cctgaaatac aggctttatg acccaggcca cccggttctt taacgatcaa ggcatctttg
    18841 atatggacct gggtaatatg cggcgccatc gtttttaaag cgtcgatggg atgctcattt
    18901 gcattgatca tgttcgcaaa atcaaacagt aaggaaagag attccatctc actttctttg
    18961 accagcgaca ccagctcatg gctttttaaa tcttcatgct gttcgatcgt aaaagtcagg
    19021 ccgctgtcct gatacgtttc ccgtacatag gcaatgtcgt tagcgatgat cgataatacg
    19081 tcgcgcaaat taccttcata acgtggataa aaacgtacgg acgatgcccc agttttcaac
    19141 gcaatggcga cggcttcgtc aatagatgcc ttatctgagg cgctggtttc aatatgaata
    19201 tcaaggttca gacggcgggc tttatctcca aaggcagaga gttctttatc gtccatatta
    19261 ccaagagaaa aacgctcgcc atccagaaca tggattttga cgccacgtag attattttca
    19321 cttgcgatat caagtaaatc agcaggcaac actctttcca gccgcatatt taaatgaaag
    19381 gcataagcat gtaaataaag aggaagagtg tcgacacgtt gtagaatctt tcttgcgtta
    19441 tttattgtca ccataaaaca cctacagatt aatgatgagg tctacggcct caaatcgcca
    19501 atattcaata tctatctgga caatattgcc ttgctggtcg gcgcgatgct tttcaattaa
    19561 gatagctggc atacccgcag aaccgccaag atacttgctg atatcgcccg gcattctgac
    19621 gggtttgaaa atcaattttt ttactaccgt ctctttttgg tagcactttt cccagactgc
    19681 agaaaatgag tggttttcaa gttgttcaat aaaacccgga gcaacttcag gattaatata
    19741 tgtttcgtga tagaaaactt tatgtccttc cagcgccccc cagccggtga tgcgatagag
    19801 ttcagttgat ggtgtcactg caatcagtgg cgcgagcgtc tcgggaatat cgctggtacg
    19861 gtttttctcg gtaaaccccc aggaaggctc tcgtccttgc tcaattgcgg cccgctgaaa
    19921 gctcgccgac aactccggac tgtaattaaa tcgcggctgg gtcacgaacc accccttacg
    19981 atccttacgg aagattttgg attctgcctc gaggttcaac aacgcctggc gcagcgtcat
    20041 acgtttaatg cccagcagtt ctcccagctc tctttctgaa gggagttttc cacccggcgt
    20101 ggtgatgcca tcttttaacc accgatccag tttctctttt gcattttcta cggtggattg
    20161 atttcccgtc attgtttaat ccttttggtt taaaccagat gaggcatctt acgcttacgc
    20221 caaaaaagaa agcaattaac ggcgtatgac tttgcagata attgtgacaa agctctctat
    20281 tgacgtaatc ccagacttat aagggagata ctcgcattgg tgtgcgctca cgacaggtaa
    20341 aaaaaaacct gccagcgatg gcaggttttt tataactaaa aaacgaaatt aatcgtcttt
    20401 cggtgcgcgg ttggcgcggc gacgatcgtt ttccgtcagg tgacgtttac gaatacggat
    20461 agaggtcgga gtcacttcta ccagttcgtc atcatcgatg aactccagag cttgttccag
    20521 agtcatgcgg ataggcggaa ccagaacaac ggcttcgtca gtaccggaag cacgcatgtt
    20581 ggtcagtttc ttaccggtca ggcagtttac agtcaggtcg ttagagcggc tatgaatacc
    20641 gataatctga ccttcgtaaa cttctgcacc gtgaccgagg aacagcttac cgcgatcctg
    20701 cagaccgaac agcgcgaacg cgaccgcttt accctgaccg ttagagatca gtacgccgtt
    20761 ctgacgctga cccacttcac ccggacgtac gtcgtcgtag tggctgaagg tggagtacag
    20821 cagaccagta ccggaagtca tggtcatgaa ctcagaacgg aagccaatca gaccacggct
    20881 tgggatcacg tagtcgagac gtacgcggcc tttaccgtct ggattcatgt ttttcaggtc
    20941 gcctttacgt tcgcccagcg cctgcattac agaaccctga tgctgttctt caacgtccag
    21001 agtcacgttt tcatatggct cttgtttacg accgtcgatt tcacggaaga taactttcgg
    21061 acgggatacc gccagttcga aaccttcacg acgcatgttt tcgatcagaa cagacaggtg
    21121 tagttcgcca cgaccagaaa cgcggaacgc atcagcgtct tcggtttctt ctacgcgcag
    21181 cgcaacgttg tgtaccagtt ctttgttcag acgatccagg atctgacgag acgttacgaa
    21241 cttaccttct ttaccgcaga acggcgaggt gttaacgcag aagaacatag aaacggtcgg
    21301 ctcatcaacg gagagtgccg gcagcgcttc aacgttttgc gtgtcgcaaa cggtgtcaga
    21361 aatgttcagt tcgccaaggc ccgtgatcgc aacgatatcg ccagcttccg ccaggtcggt
    21421 ttcgatacgt tccagaccga ggtggcccag cactttaccg actttcgcgt tgcgggtttt
    21481 gccttcgcta tcgatgatag tgacctgctg gttcggcttc actttaccgc gcttgatgcg
    21541 gccaatgccg ataacgccaa catagctgtt gtaatcgagc tgagaaatct gcatctggaa
    21601 cggaccgtca aggtcaacgt ccggcgcagg aacgtggtca acaatcgcct ggtacagcgg
    21661 ggtcatgtct tccgccatat cttcgtggtc cagacccgcg ataccgttca gcgcagaagc
    21721 gtaaacgatc gggaagtcca gctgctcgtc ggtcgcgtcg aggttaacga acagatcgaa
    21781 tacctgatcc acaacccaat caggacgcgc gccagggcgg tcaactttgt tgataacaac
    21841 aatcggcttc aggccgtaag caaacgcttt tttggttacg aagcgcgttt gcggcatcgg
    21901 gccgtcaaat gcgtcaacca ccagcagcac tgagtctacc atggacatta cacgttcaac
    21961 ttcaccaccg aagtcggcgt gccccggggt atcaacgatg ttgatacggt aatcattcca
    22021 tttgatagcg gtgtttttcg cgaggatggt aatcccacgc tctttctcca aatcgttgga
    22081 gtccatcacg cgctcttggg tttcggcacg agagtcgaac gtaccggatt gttggagcag
    22141 cttgtctacc agggtggttt taccatggtc tacgtgcgcg atgatggcga tattacgcaa
    22201 tttttcgatc acaactttgc ctcaggcatt agaaatagcg cgttattgta cacggattaa
    22261 tcgcactaca aaacaggatc acaaacatcc tccgcaaaca agtattgcag agtccctttg
    22321 tgatcgcttt cacggagcat aaaaagggtt atccaaaggt cattgcacca acatggtgct
    22381 taatgtttcc attgaagcac tatattggtg caacattcac atcgtggtgc agcccttttg
    22441 cacgatggtg cgcatgataa cgccttttag gggcaattta aaagttggca cagatttcgc
    22501 tttatctttt ttacggcgac acggccaaaa taattgcaga tttcgttacc acgacgacca
    22561 tgaccaatcc aggagagtta aagtatgtcc gctgaacacg tactgacgat gctgaacgag
    22621 cacgaagtga agtttgttga tttgcgcttc accgatacta aaggtaaaga acagcacgtc
    22681 actatccctg ctcatcaggt gaatgctgaa ttcttcgaag aaggcaaaat gtttgacggc
    22741 tcctcgattg gcggctggaa aggcattaac gagtccgaca tggtgctgat gccagacgca
    22801 tccaccgcag tgattgaccc gttcttcgcc gactccaccc tgattatccg ttgcgacatc
    22861 cttgaacctg gcaccctgca aggctatgac cgtgacccgc gctccattgc gaagcgcgcc
    22921 gaagattacc tgcgttccac tggcattgcc gacaccgtac tgttcgggcc agaacctgaa
    22981 ttcttcctgt tcgatgacat ccgtttcgga tcatctatct ccggttccca cgttgctatc
    23041 gacgatatcg aaggcgcatg gaactcctcc acccaatacg aaggtggtaa caaaggtcac
    23101 cgtccggcag tgaaaggcgg ttacttcccg gttccaccgg tagactcggc tcaggatatt
    23161 cgttctgaaa tgtgtctggt gatggaacag atgggtctgg tggttgaagc ccatcaccac
    23221 gaagtagcga ctgctggtca gaacgaagtg gctacccgct tcaataccat gaccaaaaaa
    23281 gctgacgaaa ttcagatcta caaatatgtt gtgcacaacg tagcgcaccg cttcggtaaa
    23341 accgcgacct ttatgccaaa accgatgttc ggtgataacg gctccggtat gcactgccac
    23401 atgtctctgt ctaaaaacgg cgttaacctg ttcgcaggcg acaaatacgc aggtctgtct
    23461 gagcaggcgc tgtactacat tggcggcgta atcaaacacg ctaaagcgat taacgccctg
    23521 gcaaacccga ccaccaactc ttataagcgt ctggtcccgg gctacgaagc accggtaatg
    23581 ctggcttact ctgcgcgtaa ccgttctgcg tctatccgta ttccggtggt ttcttctccg
    23641 aaagcacgtc gtatcgaagt acgtttcccg gatccggcag ctaacccgta cctgtgcttt
    23701 gctgccctgc tgatggccgg tcttgatggt atcaagaaca agatccatcc gggcgaagcc
    23761 atggacaaaa acctgtatga cctgccgcca gaagaagcga aagagatccc acaggttgca
    23821 ggctctctgg aagaagcact gaacgaactg gatctggacc gcgagttcct gaaagccggt
    23881 ggcgtgttca cggatgaagc gatcgatgcg tacatcgctc tgcgtcgcga agaagatgac
    23941 cgcgtgcgta tgactccaca tccggtagag tttgagctgt actacagcgt ctaatagttg
    24001 aagttgtact acccggcgca acaacgccgg aggttcaaac caggcccatc tggcgtaatt
    24061 gttgcagcca gtttgaacac ggacagcgcg cagaacccgg agcgtacact ggtacgtgag
    24121 gagttcgagc actgcccagg ttcaaaatgg caaataaaat agcctgatgg gactggtttt
    24181 tagttgccgt ggaaatttca gcccatctct gcatgggctt ttttctccgt caattctctg
    24241 atgcttcgcg ctttttatcc gtaaaaagct ataatgcact aaaatggtgc aacctgttca
    24301 ggagactgct ttatggcaac aggcacgcag cccgatgctg ggcagatcct caactcgctg
    24361 attaacagta ttttgttaat cgatgacaac ctggcgatcc attacgccaa ccctgccgcg
    24421 caacaactgc tcgcccaaag ctcccgcaaa ttgtttggta caccgttacc ggaactgttg
    24481 agctacttct cattaaatat cgagctgatg caagaaagtc tggaggcggg gcaaggtttt
    24541 accgataacg aagtgacgct ggtcatcgac gggcgctcgc atatcctttc tgtgacggcc
    24601 cagcgtatgc cggacggcat gatcctgctg gagatggctc cgatggataa ccagcgccgc
    24661 ttaagtcagg aacagctaca gcacgcccag caggttgctg cccgtgattt agtgcgcggc
    24721 ctggcacatg agattaaaaa tccgcttggc ggtttacgtg gcgcggcgca gctgctcagc
    24781 aaagcgttac ctgacccatc actactcgaa tataccaaag tgattatcga acaggcggac
    24841 cggctgcgaa atctggtcga ccgtctgttg gggccgcagc tgcccggtac gcgcgttacc
    24901 gaaagtattc acaaagtggc tgaacgcgtg gtaacgctgg tgtcgatgga actgccggac
    24961 aacgtgcggt tgattcgtga ttacgatccc agcctgccgg aactggcgca cgacccggat
    25021 caaattgaac aggtcttgct gaatattgtg cgcaatgcgc tacaggcgct ggggccggaa
    25081 ggcggtgaaa tcattctgcg tacccgcacc gcgtttcaac tgaccttaca cggcgagcgc
    25141 taccggctgg cggcgcggat tgatgtggaa gataacgggc cgggcattcc gcctcatttg
    25201 caggatacgc tgttttaccc gatggtcagc ggccgcgaag gtggcaccgg gcttggctta
    25261 tccatcgctc gtaatttgat tgatcagcat tcaggcaaaa ttgaatttac cagttggcca
    25321 gggcataccg agttctcggt ttacctgcct atcaggaaat aaaggtgacg tttatgcaac
    25381 gagggatagt ctgggtagtc gatgacgata gttccatccg ttgggtgctt gaacgtgcgc
    25441 tcgctggggc aggtttaacc tgtacgacgt ttgagaacgg cgcagaagtg ctggaggcgc
    25501 tggcgagcaa aacgccggat gtgctgcttt cagatatccg tatgccggga atggacgggc
    25561 tggcgctgct caagcagatt aaacagcgcc atccaatgct tccggtcatc attatgaccg
    25621 cacattccga tctggatgct gccgtcagcg cctatcaaca aggggcgttt gattatctgc
    25681 ccaaaccgtt tgatatcgac gaagcagtgg cgctggttga gcgcgctatc agtcattacc
    25741 aggaacagca gcagccgcgt aatgttcagc ttaacggccc aacgaccgat atcatcggcg
    25801 aagcgccagc catgcaggac gtgttccgta ttatcggtcg gctttcgcgt tcttctatta
    25861 gcgtgctgat taacggcgaa tccggcaccg gtaaagaact ggtcgctcat gccctgcatc
    25921 gccacagtcc gcgcgccaaa gcgccgttta tcgcgctgaa tatggcagct atcccaaaag
    25981 atttgatcga atcagaactg tttggccacg agaaaggcgc gtttactggc gcgaatacca
    26041 ttcgtcaggg gcgttttgaa caggccgatg gcggtacatt attcctcgac gaaattggtg
    26101 atatgccgct ggatgtgcag acgcgtttgc tgcgcgtgct ggcagacggt cagttttacc
    26161 gcgttggcgg ctatgcgccg gtgaaagtgg atgtgcggat tatcgctgcc actcaccaga
    26221 atctcgaaca gcgagtgcag gaaggtaagt tccgtgagga tctgttccac cgcctgaacg
    26281 ttatccgcgt tcatctgccg ccgctgcgcg aacgtcggga agatattccc cgtctggcgc
    26341 gccatttttt acaggttgcc gcgcgcgaac tgggcgtaga agcgaagtta ctgcatccgg
    26401 aaaccgaagc tgctctgacg cgtctggcgt ggccaggcaa cgtgcgccag ctggaaaaca
    26461 cctgccgctg gctaacggtg atggccgccg ggcaggaagt gttgattcag gatttgcccg
    26521 gcgaactgtt tgaatcaacg gttgcggaga gtacttcgca aatgcaaccg gacagttggg
    26581 cgacgcttct tgcgcagtgg gcagacagag cgctgcgttc cggtcatcaa aatctgcttt
    26641 ccgaagcgca gccagagctg gagcggacgt tactgacgac cgcgttgcga catacgcagg
    26701 ggcataaaca ggaagcggcg cggctactcg gctggggccg caacactctg acgcgtaagt
    26761 taaaagagct ggggatggag tgattcacgg cgtgtgtgta aagattgatt attgagcgca
    26821 aattgctggt attttgcgct ttactgttcc gataagttca gtatgatctt gcccggaaaa
    26881 cggggagagt cattatgctg gaatcaataa ttaatctggt atcgagtggc gcagttgaca
    26941 gccacacacc gcaaactgcc gttgctgccg tgctgtgtgc cgcaatgatt gggctgttta
    27001 gttgagtttc agattgctga tgaagtgctc tttgttcatg ccggatgcgg cgtgaacgcc
    27061 ttatccggcc tacaaaagca atattttcaa caggttttgt aggcctgata agcgtagcgc
    27121 atcaggcaat cttgttctca gcacattgat ggcgctttcg ttttctactt tgtaaacgaa
    27181 gcgccattca ctatttaaat cacccgtgag aactgctgca tccgcgcttt ctggcgcaga
    27241 taggtatcaa agcacatgca aatgttgcgg atcagcaagc gacctttcgc cgtcacctgt
    27301 attcccttct catccacatc caccagccca tcttttgcta acggggcgag cagcttgaga
    27361 tcttccgcaa agtaatcagc gaagtgcaaa tcccactgtt tctcaatagg ggcgtaatcc
    27421 agacggaagt tgcagatgag cgacttaatc acatcgcggc gaatacagtc atcacgcgtt
    27481 agcgcaatac cacgccacag cgcattgcct tgttcatcca cttgctgata gtactgcttc
    27541 aactctttct ggttctgcgc gtagcagtcg ccaatcatgc tgatggcgga aacgcccatc
    27601 cccagcagat cggtatcgcc ctgagtggtg tagccctgga agttacgatg cagcacgcct
    27661 tcacgctggg ccaccgccag ctcgtcatcc ggacgggcaa agtgatccat accgataaac
    27721 tgatagcccg attgcgtcag gaaggcgatg gtttcctgca ggatatcgag tttttgctgc
    27781 ggactcggca ggtcagcatc tttgattttg cgctgagcag caaaaatggt cggcagatgc
    27841 gcgtagttaa agacactcag acgatcgggg ttcagctccg ccacacgttt cagggtaaag
    27901 gcgaaactct ccggcgtctg tttcggcagg ccgtaaatca ggtcgatgtt ggtggaggta
    27961 aaaccaatct cacgcgcatg gttaagcagt gcaaagatga actcttcatc ctgctcgcgg
    28021 ttaaccagac gttgcacttc tttgttgaag tcctgcacgc ccatgctcag gcgattaaag
    28081 ccttcggcgc gtaaatgatc gagtacatcc agttcgattt cccgcggatc gacttcgatc
    28141 gaaatctccg catcggcatt gaactggaag ttttcgcgca gcagcttcat caggcggctg
    28201 atttgcgctt tattcagata cgtcggcgtt ccgccgcccc agtgcaattg gctgacgtga
    28261 cgcccggcga acagcggtgc acgatggacg atttcttgct ccagcgcgtc cagatactga
    28321 tcggccttgt gctgctggcg agtaacaatc ttattgcaac cgcagaagta acaaagctta
    28381 tggcagaacg ggatatgtac gtagagagat aatggacgct caggatagcg cgccacggct
    28441 tgtaaaaacg cctgttcgcc gaagtcttct gaaaactcca gcgcggtcgg gtacgaggtg
    28501 tatcgtggcc cggaatagtt atatttctgg atcagggcca gatcccagtc gatttgctgt
    28561 acagacatgc tcactccttc cgatggcgtc tctggcggct acggcgtacc ggcggatgcc
    28621 cgtttcgggt catcagccgg ttgcgcagcc acttttgtcg ccgcgacaac cgctgtagtt
    28681 taacgaataa ccacaccaga taacatataa ccggaagggt tatcagcaga acgggaaggc
    28741 ccacggcggc aatccgttag ttgccccgca gcagacgcat catgtcttct tgcttctcgt
    28801 cttcttcctc ttcttcgtca tcgtcataag agaggccgag tttctgcatc aactcatcaa
    28861 tacgatccag tttagcatcc acccaggatt gctcttcggc actcagggtt tcgcctgctt
    28921 ccagacgttc cagcagcgca tccagacgct catccgtttc cagtaattcc aactccgcct
    28981 gcggtgaaag cataggtttc tcactcttcg gtttgtgctg tttggtgact ttttcagtca
    29041 cgcccaatgg aataggggtt ttactgccaa tacgtggatc ttttggtgcg ttctggcctt
    29101 tgctgcctga cgtggtgttt ccgcccgctg cgcggctgcc cggcgcatga ccacgacgtt
    29161 ttttctgacg cttgcgatca cgagcttcct gatccagctc ctcgcgtgtt tttcgacgcg
    29221 cttttgcatg acctttgctg cgtgagtttg aagatgatgg tttcataatg gttcgtcttt
    29281 tagccgtttt attcagtata gatttgcggc ggaatctaac agaaagcaag caaagaaaaa
    29341 aggcgacaga ttactctgtc gccttttttc ctgactcata acccttaacg ggtcttacaa
    29401 tccttgcagg ccgccaacac accctgtttt tcctttagcc ggaacaatcc gtgttgattc
    29461 catttccgtt taattacgtc tccggacgtt tgtcttcctg acaatcctct gtcttcgcct
    29521 cctggcgctc ctgaccctca tcctgagtca ttgttcctgt tagcgtcctc gctctatggg
    29581 tgctacttta cgcctttgct ttaaacaaac aatcaaccgc catcagtatt tgcacatttt
    29641 cagagtttta tataaaagca attcactgat ttatatagct tatttgacat gcatcgcaga
    29701 attttctctg ctatttcgca taaagactat cggcaatgtc tcacaaagcg tatggctttt
    29761 acttacaacg ctcacgccga aaaatccgcc ttttattatg gttcaggtat aatcgccaca
    29821 aagctttgac tgacggagac gaccgctttg actaatttga attatcaaca gacgcatttt
    29881 gtgatgagtg cgcctgatat tcgccaccta ccttccgata ccggaattga agtggctttt
    29941 gcaggccgtt ccaacgcagg taaatccagc gcgctgaaca cgctgactaa ccagaaaagc
    30001 ctggctcgta cctcaaaaac cccagggcgc acccagctta tcaacctgtt tgaagtggct
    30061 gacggcaagc gtctggttga cttgcctggg tacggttatg cggaagtccc ggaagagatg
    30121 aagcgcaaat ggcagcgtgc gctcggcgaa tacctcgaaa aacgtcagag cctgcaaggt
    30181 ctggtggtgc taatggatat tcgccatccg ctgaaagatt tggatcagca gatgattgag
    30241 tgggcggtag acagcaatat cgccgttctg gtgctgctga ccaaagcgga caaactggca
    30301 agcggcgcac gtaaagcgca attgaatatg gtgcgtgaag ctgtactggc gtttaacggt
    30361 gatgtgcagg ttgaaacgtt ttcttcgttg aagaaacaag gcgtggacaa gctgcggcag
    30421 aaactggata cctggtttag cgagatgcag cctgtagaag aaacgcagga cggcgaataa
    30481 ttttcttgcc ttaatgcttg tgccggatgt ggcgtatccg gcccgtaaat tcaatagatt
    30541 acaattctac cgttggcctg ataaacatag cgcatcaggc attacggatc ttttctttcg
    30601 cccaataaaa aacgccccag tcattactga ctggggcggc taaaatattc agccaaatcc
    30661 gattacgtga agtaaaaggt ctgaaagata gaacatctta cctctgtacc ctacgcgact
    30721 aactttactc ttttttgttc agttcagaaa gcactttttg taattttttt tcagttgttg
    30781 cataggaatt tctaatagcc atcacaaaac gtgacagctt atgttgctta cttacgaaaa
    30841 aagggcatgt tcaggcgaat cttagtgcgc ctgatcccag ttttcgccac tccccacttc
    30901 caccagcaac ggcacatcca gacgggtaca gttttccatc agttgatgaa tctgcttcgc
    30961 gacggcatca acatcatctt tatgaacttc aaataccagt tcatcgtgta cctgcatgat
    31021 catacgtaca cgcggttgct cagcctgtaa ccacgcatca acggcaatca tcgcccgttt
    31081 gataatgtcg gcggcggttc cctgcattgg cgcgttaatg gctgcacgtt cagccgctgc
    31141 acgacgagca ccattgctgg atttgatatc cggcagatac agacggcgtc cgtccagcgt
    31201 ttcaacgtag ccctgctctt tcgcctgagc acgggtgcgt tccatatact ccagcacgcc
    31261 agggtagcgt tcgaagtaaa ggtccatgta cttctgcgct tctttacgtg gaatgttcaa
    31321 ttgccgcgcc agaccgaaag cactcatgcc ataaatcaga ccaaagttga tcgctttcgc
    31381 gctacggcgt tgctcgctgg tgacggtttc cagtggcaaa ccaaacactt ctgccgccgt
    31441 tgcccggtgg atatcttttc cttccgcgaa tgcggtcagc aagcctttgt cacgcgaaag
    31501 atgcgccata atgcgcagtt caatctgcga gtagtccgct gagacaatca cataatcctc
    31561 tggcgcaata aacgcctggc ggatacgacg accttcttcg ttacgcaccg gaatgttttg
    31621 caggttagga tcggttgacg ataaacgtcc cgttgcagtt actgcctggt gataagaggt
    31681 atgcacacgc ccggttttcg ggttgatcat cagcggcagc ttgtcggtgt aggtcgattt
    31741 cagcttcgcc agaccacgat actccagaat cacttttggc aacggatagt ccagcgccag
    31801 ttcttccagt acctcttccg acgttgacgg cgcgccaccc ggcgttttct tcagcggttt
    31861 aataccctgt ttttcaaaga gaatggtttg taactgcttg gtggaagaaa ggttaaattc
    31921 ctcacctgca atttcatgcg ctttcttttc cagctcagcc agacgaaggg tgagctcttc
    31981 agaatgattg tgcagcactt tcggatcgat cttcacaccg ttacgttcaa tgcgtgaaag
    32041 cactggcacc agcggcattt cgatattctc gaagacgttc aacggccctt tgtgtttttg
    32101 cagatccggc cacattttca gatgcaactg caaggtgaca tctgcatctt cggcggcgta
    32161 acgtccggct tcttcgaggg caatctggtt aaaggtcagt tgatttttgc ctttaccagc
    32221 aatctcttca aaagtgatgg ttttgtgctt caaccaacgt tccgcgaggc tgtccatatc
    32281 gtgacgcccg gcaacgctat tgagaatgta ggactccagc atggtatcaa acgcaatccc
    32341 acgcagttca atgccgtagt tcgccagaat accgcgatcg tatttcaggt tttgcccgac
    32401 cttcagcgcc ttttcatctt ccagcagcgg ttttagcaac tcgagtgcac gctcgcgaga
    32461 gatttgatcg ggcgcatcaa gataatcatg agcaaccgga atatatgccg ctacgcctgg
    32521 ctcgatagca aaagaaagcc cgaccaggtt agcagagatg ttatcaaggc tgtcggtttc
    32581 ggtatcaaat gcaaataccg gcgctttttc cagcttcgca atccacgctt tcagtgtttc
    32641 ttcatcaagg atggtgacgt agttgtcata agaaatcacc gttgccgtca cttctggcgc
    32701 ttcgtctgca acactggttt cctgtggctt cgcggctggt tttgcccctt tggcctgtaa
    32761 ccatttgccc gcttcgacat cagcagtcca gcgtttgaac tcatactttt tgaacagccc
    32821 caacaactct tccgctgccg gttgctgcac ttccagttgt tcacaggtca gctccagttc
    32881 aacgtcggtt ttaatcgtcg ccagctggta tgagagataa gcaacttctt tgttttgctc
    32941 gagcttcgct gccattgttt tcgcgccacg gaagctcaac ccagcaattt tttctggctc
    33001 ggcatacagc gtatccagtc cgccaagacc ttgcagcaat gcctgcgcgg ttttttcacc
    33061 gacgcccggt acgccaggaa tgttatcaga ggagtcaccc atcagcgcca ggaaatcgat
    33121 gatcagttct ggcggcacgc cgtacttatt caccacctct tccggtccga ggatggtatt
    33181 cgtcatggta ttgataagcg taatatttgg cgtcaccagc tgcgccatat ctttatcgcc
    33241 agtgctgatc agcaccggac gcccggcttt ttcggcttcg cgcgccagag taccgataac
    33301 gtcgtccgct tctacgccag aaaccgccag cagcggcagt cccatcgctt taaccatcgc
    33361 gtgcaagggt tcgatttgtg cacgcagatc gtccggcatt ggcgggcgat gtgatttgta
    33421 atgttcaaac agttcatcac gaaaggtttt tcccttggcg tcaaagacca ccgctgcatg
    33481 cgtcggttta tattgcatga tcagactgcg cagcatgttg aggacaccat acatcgcacc
    33541 ggtcggctcg cctgcgctgt tagtcagcgg gggaaacgcg tgatatgcgc gataaagata
    33601 agatgaacca tctacaagga taagtggatt ttgggggatc tgaaccataa tgtccgtgcc
    33661 tgtttatcag attatgggta aaggatgcca cagacaggat aaaaacatga gtttttcacc
    33721 gcttttcgtg aaaatctttt gtagatcttc tggatcgctc gcaaatcgtc atgtggataa
    33781 ctttgtgcat aaattattta catcgctttt aatttattat catgcttttt acagtatgat
    33841 gtttgtcttt gtttttcatg cagttaaaaa taaagccatc cctaataatt gagataatgg
    33901 gattttttct aatgtggata gatatgaatt atttttctcc ttaaggatca tccgttattt
    33961 gggtcgtttt ctgctaaaat ctgcgccttg cgcttcttta gcgcactgtc tatggctaac
    34021 cttttgaata aattcattat gacgagaata ctcgctgcga taaccctttt gctgagtatc
    34081 gtattgacca ttttggtcac tattttttgc tccgtcccga tcatcattgc cgggattgta
    34141 aaactattgc tacctgtgcc agtcatttgg cgaaaggttt cgcgtttttg tgattttatg
    34201 atgtattgct ggtgtgaagg tctggcggta ttactgcatc tgaacccaca cctgcaatgg
    34261 gaagttcacg ggctggaagg gttaagtaag aagaactggt atctgcttat ttgtaaccac
    34321 cgtagttggg cagatattgt cgtactgtgc gtgctgtttc gtaagcacat tccgatgaat
    34381 aaatatttcc tcaagcaaca gctggcctgg gtgccatttc ttggcctggc gtgctgggcg
    34441 ctggatatgc cgtttatgaa gcgttattcc cgcgcttatt tattacgtca tccggagcga
    34501 cgtggtaaag atgttgaaac cactcggcgt tcttgtgaaa agtttcgcct gcatcccacc
    34561 accattgtca atttcgttga aggctcccgt ttcacgcaag aaaaacatca gcaaacccac
    34621 tccacttttc aaaacttgtt gccaccaaag gcggcaggca ttgcgatggc gctaaatgta
    34681 ctgggtaaac aattcgataa actgcttaat gttacgctgt gttatccgga caataaccgt
    34741 cagccgttct tcgatatgtt aagcggtaaa ctgacgcgaa ttgtcgttca tgtggattta
    34801 cagcctattg ccgatgagtt acatggcgac tacatcaatg acaaaagctt taagcgccat
    34861 tttcagcaat ggctgaactc actgtggcag gaaaaagacc gacttctgac gtcgttgatg
    34921 tcatcacagc ggcaggacaa gtaaattttg ctcgcctctg aatgagcaga ggcgagtgag
    34981 tattttaatg aacaaaacgt ccggcacgag acataaattc ttcttcgctc atctcctgtc
    35041 cgttaaaaac aactttaccc ggtgtataac gcagttgcag cgaggcggta ttgttgtcaa
    35101 tcgtgattaa ctgaaacatc tgacctaagg tcatcatccc gctgatttgt ttatcagccc
    35161 gcttttgcgc tttttccgca tccattcctt cagataaatt aagctgtttt gcggtttctg
    35221 tggcgacatt aagcggtaac ttcacatcaa aattgagcga tttaatatct ttgtttgtgg
    35281 atgatgaaga tttggctggg tcggcaatac tgatatccag attggcattt agttcgccga
    35341 gtgcgttctt ccattttacc ggttgtttaa tggtcggctc acttttttgt aataacggta
    35401 aatactcttt gaacaatgca gcattcactt cttgcagagc aacttcatcg tttgctaact
    35461 cagggtgtgc agcaagctgc ttctgcattg caatgttata ctggatgata aattggcgca
    35521 ccgctgaggg atcaatagat tcagcaatca atgaccactc accactaccg agttgctgat
    35581 tcccttttgt taacttatca agttcgtagg tcagattgac attgatataa tctttgtctt
    35641 taacgcgatc cagcatggtt tttgcaacga aagcatcgat ttgggcaacg tcttccccgt
    35701 gattgataat gttaatctga ttaaatttcg actcgctttc accaaccgga aatttctttt
    35761 cttctaatcg cgccagagaa tcaatggtaa aactttttgc cgttactttg ttcattggtg
    35821 ataattgcag aacaatatct tcgactttgc cttcaatatc caggttagac aatgaactac
    35881 catcaccatt aaaagtaaac tggccctcac caaaagaaaa ctttccatac tctgcagggg
    35941 caacatctaa tgtcgtagag aatgagccac caaacgcgaa tcgcaatgtc gcttccacgg
    36001 gcgatttatt tttcgcggcg ataaatagcg gttgtgtcag ttcattattc actaagttca
    36061 cttttgccgc tgccagtgct gggatgacat taccatgcat taacattgtg atgggcaacg
    36121 gaccgtgctc aacatccaca tcaaatacaa ctttctggcc tggcttgata ttgagatcgg
    36181 gtgcaccgtt atcgaatgtc atttgcattt gaaaacggga attaaaaaag cctttgtcaa
    36241 agtttttata acttaacgtc atatcgtagg catgttcacc tttctttttc gcatcgttaa
    36301 aatctttaat aaacttttcg acaccaggct gaatttgcgt acctgtgtac catgtgccac
    36361 caccccagat tacggctaac gcaacaataa cacctgtagc tgacttatgt atcatataaa
    36421 tattccctga taaaacagca aaactttaaa tatccgctta tgctgaaata atgtccagcg
    36481 gcaggacgca ttatcagaat gtatttatat ttattaaata ataaaaaaaa cccgtgaata
    36541 ttcacgggcc ttatgtaatt tacattgaat tattttttct cggacagata tttcactgta
    36601 tcagcatact gctgaacaaa aacatccata ttgctggtat ccataccctg cggattcagc
    36661 tgatatttac cgttaacaaa catcgccgga acgccacgca attgcacgtc agctgcagct
    36721 ttttcctgct gagcgaccag agatttgacc acgaagctgt tccacgccgc gtcgtactct
    36781 tcacctttaa tacctgcgtt gataaataca tcgcggatat cagatgctga acgaatggtc
    36841 tgggttttct gtacgccttc aaacagcgga acagtgactt tgtcttccac gcccagcgcc
    36901 atcgccacag cccatgcctg agtcagatct ttgcccaggt caccacccat gaagttgacg
    36961 tggtatttag tcatcttcac gccttccggc agttttttct tcacattatc agaaatatgc
    37021 agaacttctt caaactgata gcagtgcgga cagaagaaag agaaaaactc cagcacttgc
    37081 ggcgcgccag ctaccggttt ttccagggta gtgtactgtt taccatcttc atactgcgcc
    37141 gccgatgcgc taaacgctaa aactaaacca gccagcgcca gccaaatctt tttcatgatc
    37201 tactctctcc gattaataca taggtgttaa ttgtaaaggg ggttcttgta gaacttttgc
    37261 ctgttctata aaagtcgccg tttgtcgcag ccagtaatct tccccggtta accacgggaa
    37321 atttttcggg aacgcgggat cagcccaacg ccgcattagc caggcaagat aataaaccaa
    37381 acgcatggcg cgtaaaggtt caatcagtcc gatttcagcg gtgtcgaact cgctaaattc
    37441 ttcataagct tcaataatag tttccagttg catccgctgc tcggctttat cgccattgag
    37501 caacatccac aaatcctgaa tagctggacc attacgtgca tcatccagat caacaaacat
    37561 tggaccatcg cgccagagaa tattcccggc gtggcagtct ccatgtagcc gcagaacggt
    37621 gaagtcttcc cgccagtgtg ctgtaacggc ggcgatcagc tcatctgtcg ctttcaggaa
    37681 tgccgctttc aacccggaag gcatcagtgt agcgtcctca aacagcttgc gtggctcaat
    37741 gagatattca ttcagaccga tggtcgggcg atggataaaa agctgtttgc gccccgtctg
    37801 gtgcatacgc cctaaataac gcccaaccgc ttccatctga tcgatattat cagcttcgaa
    37861 ctggcgacca ccgacgcttg gaaaaacagc gaaataaaat ccctgatgat tcaataaagt
    37921 ctgaccgtta aaggccacag gtgctgcgac cggaacttca tcatttacca actgcaacgc
    37981 aaattgatgt tcttcgagga tttgatcggc tgtccaacgt tcagggcgat aaaatttgac
    38041 gacaaaacgt cgacgatctt cgtcctgaaa ttgatagaca cggttttcat agctgttaag
    38101 cggggtaaga ccggaatcca cccggatccc ttgctcaaat agagcatcca tgatggtatc
    38161 cgggtgtagt gtctggaaag taaaagcgct gttgttcatc ccatcatccg gaaaacatta
    38221 cgaatgatga aggatatcat ttcacgatga ttttggtggc accgcttaca agcttttact
    38281 ctttaattac gccgcgagcg cgtaacagcg ccgttttgaa gtcttcttca taatctttct
    38341 gcaaacccgg gatcaccgca tctttcgcgg aatcacgcat tttcaggtga tagatcagaa
    38401 tgtcatccgt caaatccgcc agttcgccgt caaaacctga ctctttcgcc agtttctgca
    38461 aaaattgcaa caggttaagg tctggctctt tttgccaggc tggctggagg agttcaataa
    38521 cttcattcag acgtttacat ttcatagtaa tgctccttac tcttgagaca gacacgttag
    38581 cagggtcaat cccacaataa aagaggcgat atcggtgaat ctgatgacga cgataacagg
    38641 cgttgtgctg gcaggcggta aagccagacg aatgggcggc gtagataaag gattgcttga
    38701 attaaacggc aaaccattat ggcaacatgt cgctgacgcg cttatgacgc agctctctca
    38761 cgtcgtggtt aatgccaatc gccatcagga aatctatcag gcaagcggtc tgaaagtgat
    38821 tgaagattca ctggcggatt acccaggccc tctggcagga atgctttcag taatgcagca
    38881 ggaagcaggc gagtggtttt tgttttgtcc gtgcgatact ccttatattc ccgaggattt
    38941 agcagcccgg cttaatcatc agcgcaaaga tgcgcctgtc gtgtgggtcc acgacggtga
    39001 acgcgatcac ccgactattg ctctggtaaa ccgcgcaatt gagcctttat tactggaata
    39061 tctgcaagca ggagaacgcc gggtaatggc atttatgcgt ctggctggcg gtcatgcggt
    39121 tgatttcagc gataataaag atgcatttat taacgtgaat acgccagagg agcttgcccg
    39181 atggcaggaa aaacgatgat accgttactc gcctttgccg cgtggagtgg taccggaaaa
    39241 actacgcttt tgaaacaact gatcccggca ttatgcgcca gagggatccg tccagggctg
    39301 attaagcata cgcaccatga tatggatgtt gataagccag gcaaagatag ctatgagctg
    39361 cgcaaggctg gcgcggcaca aaccatcgtt gccagccagc aacgatgggc cttgatgacg
    39421 gaaacaccag acgaagaaga gctggatcta cagtttctcg caagtcgaat ggatacctca
    39481 aagctggatt tgattctggt cgaagggttt aagcatgaag agatcgcaaa gattgtgctg
    39541 tttcgcgatg gagccggaca tcgacctgaa gaattagtga tagacaggca tgttattgct
    39601 gtagccagtg atgtgccgct taatcttgat gtcgcattac tggatattaa tgatgttgag
    39661 gggctggctg attttgtggt ggagtggatg caaaagcaga acggataagc aagagtaggc
    39721 tggatcagac gcagccagtg tcgcatccga cctttttctg caccagcgca aaaaggccca
    39781 gtcttccgac tgggcctttc gttt
//
LOCUS       DAPGWB010000025        39615 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.025, whole genome shotgun sequence.
ACCESSION   DAPGWB010000025 DAPGWB010000000
VERSION     DAPGWB010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 39615)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39615)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39615
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.025"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(174..869)
                     /gene="aqpZ"
                     /locus_tag="RHX79_001291"
     CDS             complement(174..869)
                     /gene="aqpZ"
                     /locus_tag="RHX79_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HDV2196486.1"
                     /translation="MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFG
                     LTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI
                     ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG
                     FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGII
                     GGLIYRTLLEKRN"
     gene            1295..2953
                     /locus_tag="RHX79_001292"
     CDS             1295..2953
                     /locus_tag="RHX79_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HDV2196487.1"
                     /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL
                     LLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP
                     CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR
                     DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH
                     YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMVDRPGGRSYRVILLGLFATLLQA
                     KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE
                     HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV
                     INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
                     RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAI
                     HRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD"
     gene            complement(2950..3906)
                     /locus_tag="RHX79_001293"
     CDS             complement(2950..3906)
                     /locus_tag="RHX79_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HDV2196488.1"
                     /translation="MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQ
                     KFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEAL
                     RYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILF
                     RNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVM
                     EAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHY
                     RLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG"
     gene            4057..5172
                     /gene="macA"
                     /locus_tag="RHX79_001294"
     CDS             4057..5172
                     /gene="macA"
                     /locus_tag="RHX79_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308991.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide transporter subunit MacA"
                     /protein_id="HDV2196489.1"
                     /translation="MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPG
                     DLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK
                     EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQI
                     GTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA
                     DMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYY
                     ARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR
                     EREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ"
     gene            5169..7115
                     /gene="macB"
                     /locus_tag="RHX79_001295"
     CDS             5169..7115
                     /gene="macB"
                     /locus_tag="RHX79_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide ABC transporter ATP-binding
                     protein/permease MacB"
                     /protein_id="HDV2196490.1"
                     /translation="MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYAGEMVAIVGASG
                     SGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLT
                     AEQNVEVPAVYAGLERKQRLLRAQGLLQRLGLEDRTEYYPAQLSGGQQQRVSIARALM
                     NGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRD
                     GEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTM
                     LGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYD
                     DLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQ
                     EQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVL
                     RVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMD
                     GVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS
                     DVLQQFLIEAVLVCLVGGALGITLSLLIAFILQLFLPGWEIGFSPLALLLAFLCSTAT
                     GILFGWLPARNAARLDPVDALARE"
     gene            complement(7188..7412)
                     /gene="cspD"
                     /locus_tag="RHX79_001296"
     CDS             complement(7188..7412)
                     /gene="cspD"
                     /locus_tag="RHX79_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspD"
                     /protein_id="HDV2196491.1"
                     /translation="MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA
                     GQSVQFDVHQGPKGNHASVIVPVEVEAAVA"
     gene            7735..8055
                     /gene="clpS"
                     /locus_tag="RHX79_001297"
     CDS             7735..8055
                     /gene="clpS"
                     /locus_tag="RHX79_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HDV2196492.1"
                     /translation="MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVI
                     DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT
                     LEKA"
     gene            8086..10362
                     /gene="clpA"
                     /locus_tag="RHX79_001298"
     CDS             8086..10362
                     /gene="clpA"
                     /locus_tag="RHX79_001298"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HDV2196493.1"
                     /translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL
                     EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE
                     VTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE
                     EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV
                     GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ
                     DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD
                     RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR
                     HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK
                     NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL
                     SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI
                     EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN
                     STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV
                     SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN
                     ELTYGFQSAQKHKAEAAH"
     gene            complement(10765..10852)
                     /locus_tag="RHX79_001299"
     tRNA            complement(10765..10852)
                     /locus_tag="RHX79_001299"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10816..10818),aa:Ser,seq:gga)
     gene            complement(11106..11324)
                     /gene="infA"
                     /locus_tag="RHX79_001300"
     CDS             complement(11106..11324)
                     /gene="infA"
                     /locus_tag="RHX79_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDV2196494.1"
                     /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY
                     IRILTGDKVTVELTPYDLSKGRIVFRSR"
     gene            complement(11609..12313)
                     /gene="aat"
                     /locus_tag="RHX79_001301"
     CDS             complement(11609..12313)
                     /gene="aat"
                     /locus_tag="RHX79_001301"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HDV2196495.1"
                     /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQR
                     GIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMMRFHKRSPYRVTMNYAFGQVIEGC
                     ASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFS
                     RMENASKTALLVFCEDFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGR
                     LPNNFWVPRCLFSPQE"
     gene            complement(12355..14076)
                     /gene="cydC"
                     /locus_tag="RHX79_001302"
     CDS             complement(12355..14076)
                     /gene="cydC"
                     /locus_tag="RHX79_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HDV2196496.1"
                     /translation="MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLS
                     ASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK
                     LLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDF
                     TLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGA
                     SDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQP
                     GALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVA
                     DRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDP
                     QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDDALAESL
                     RRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDAT
                     TESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRY
                     YQFKQGL"
     gene            complement(14077..15843)
                     /gene="cydD"
                     /locus_tag="RHX79_001303"
     CDS             complement(14077..15843)
                     /gene="cydD"
                     /locus_tag="RHX79_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HDV2196497.1"
                     /translation="MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWF
                     MARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQV
                     LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFP
                     SNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF
                     GRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGEL
                     DFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAH
                     PQRGEAELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSL
                     LNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDA
                     SEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLL
                     LDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGR
                     YAELSVAGGPFATLLAHRQEEI"
     gene            complement(15966..16931)
                     /gene="trxB"
                     /locus_tag="RHX79_001304"
     CDS             complement(15966..16931)
                     /gene="trxB"
                     /locus_tag="RHX79_001304"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDV2196498.1"
                     /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL
                     TTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG
                     EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE
                     EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV
                     TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQ
                     TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK"
     gene            17476..17970
                     /gene="lrp"
                     /locus_tag="RHX79_001305"
     CDS             17476..17970
                     /gene="lrp"
                     /locus_tag="RHX79_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001591745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HDV2196499.1"
                     /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP
                     CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEE
                     IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV
                     IKTR"
     gene            18105..22250
                     /gene="ftsK"
                     /locus_tag="RHX79_001306"
     CDS             18105..22250
                     /gene="ftsK"
                     /locus_tag="RHX79_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HDV2196500.1"
                     /translation="MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSF
                     NPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQS
                     SDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS
                     SGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYE
                     DDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDE
                     EIIYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWA
                     APVEPVTQTPPVASVDVPPSQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQ
                     YNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAAEQPVQQPYYAPAPEQPVAGNAWQAE
                     EQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQSVEQQPVVEPEPVVEETKPARPPLYY
                     FEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLAS
                     GVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYG
                     IKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQH
                     DVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGP
                     HEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVPPQQQYQQPQQPVAPQQQYQQPQQPV
                     PPQQQYQQPQQPVAPQPQYQQPQQQVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQY
                     QQPQQPVAPQQQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALE
                     QMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTV
                     AVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVV
                     ADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIP
                     HLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPD
                     PYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHL
                     VLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPN
                     STLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPL
                     FDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPP
                     PFD"
     gene            22405..23016
                     /gene="lolA"
                     /locus_tag="RHX79_001307"
     CDS             22405..23016
                     /gene="lolA"
                     /locus_tag="RHX79_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010354356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDV2196501.1"
                     /translation="MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQK
                     VTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWL
                     KDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQ
                     FSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK"
     gene            23027..24370
                     /gene="rarA"
                     /locus_tag="RHX79_001308"
                     /gene_synonym="mgsA"
     CDS             23027..24370
                     /gene="rarA"
                     /locus_tag="RHX79_001308"
                     /gene_synonym="mgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein
                     RarA"
                     /protein_id="HDV2196502.1"
                     /translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA
                     IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR
                     NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY
                     LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM
                     ADMAEVNDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY
                     WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA
                     QAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA
                     HDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR"
     gene            24461..25753
                     /gene="serS"
                     /locus_tag="RHX79_001309"
     CDS             24461..25753
                     /gene="serS"
                     /locus_tag="RHX79_001309"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDV2196503.1"
                     /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKT
                     ENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALT
                     IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS
                     RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLF
                     HTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGR
                     DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG
                     FGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG
                     LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG"
     gene            25992..28436
                     /gene="dmsA"
                     /locus_tag="RHX79_001310"
     CDS             25992..28436
                     /gene="dmsA"
                     /locus_tag="RHX79_001310"
                     /EC_number="1.8.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit A"
                     /protein_id="HDV2196504.1"
                     /translation="MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSALTLPFSRIAH
                     AVDSAIPTKSDEKVIWSACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYDGLHQVR
                     ACLRGRSMRRRVYNPDRLKYPMKRVGARGEGKFERISWEEAYDIIATNMQRLIKEYGN
                     ESIYLNYGTGTLGGTMTRSWPPGNTLVARLMNCCGGYLNHYGDYSSAQIAEGLNYTYG
                     GWADGNSPSDIENSKLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTD
                     TGAGREDEWIPIRPGTDAALVNGLAYVMITENLVDQAFLDKYCVGYDEKTLPASAPKN
                     GHYKAYILGEGPDGVAKTPEWASQITGVPADKIIKLAREIGSTKPAFISQGWGPQRHA
                     NGEIATRAISMLAILTGNVGINGGNSGAREGSYSLPFVRMPTLENPIQTSISMFMWTD
                     AIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDKKCEL
                     IVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFNDQVIKPRFECKTI
                     YEMTSELAKRLGVEQQFTEGRTQEEWMRHLYAQSREAIPELPTFEEFRKQGIFKKRDP
                     QGHHVAYKAFREDPQANPLTTPSGKIEIYSQALADIAATWELPEGDVIDPLPIYTPGF
                     ESYQDPLNKQYPLQLTGFHYKSRVHSTYGNVDVLKAACRQEMWINPLDAQKRGINNGD
                     KVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDTKRVDKGGCINVLTTQRPSPL
                     AKGNPSHTNLVQVEKV"
     gene            28447..29064
                     /gene="dmsB"
                     /locus_tag="RHX79_001311"
     CDS             28447..29064
                     /gene="dmsB"
                     /locus_tag="RHX79_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HDV2196505.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAG
                     GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGC
                     RYCHMACPYGAPQYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK
                     KHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
     gene            29066..29929
                     /gene="dmsC"
                     /locus_tag="RHX79_001312"
     CDS             29066..29929
                     /gene="dmsC"
                     /locus_tag="RHX79_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit
                     DmsC"
                     /protein_id="HDV2196506.1"
                     /translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRV
                     IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGW
                     LLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMF
                     MGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVMSVMQGTELATIHSSVQQAAA
                     LVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYG
                     LHMTVGMAVAS"
     gene            complement(29965..30591)
                     /locus_tag="RHX79_001313"
     CDS             complement(29965..30591)
                     /locus_tag="RHX79_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HDV2196507.1"
                     /translation="MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALG
                     DLAKYFNLPTILTTSFETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKA
                     TGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGA
                     QLMTWFGVACELHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK"
     gene            30906..32054
                     /locus_tag="RHX79_001314"
     CDS             30906..32054
                     /locus_tag="RHX79_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196508.1"
                     /translation="MSTYTRPVMLLLSGLLLLTLAIAVLNTLVPLWLAQEHMSTWQVG
                     VVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLASFIFAAGCAGLGLMIGFWSWLAWRF
                     VAGVGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSV
                     LPWVTGLTLAGILPLLFTRVLNQQAENHDSTSITSMLKLRQARLGVNGCIISGIVLGS
                     LYGLMPLYLNHKGVSNASIGFWMAVLVSAGILGQWPIGRLADKFGRLLVLRVQVFVVI
                     LGSIAMLSQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGS
                     LLGPSFTAMLMQNFSDNLLFIMIASVSFIYLLMLLRNAGHTPKPVAHV"
     gene            32264..33694
                     /locus_tag="RHX79_001315"
     CDS             32264..33694
                     /locus_tag="RHX79_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415419.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDV2196509.1"
                     /translation="MAGNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSW
                     VFIFALYFTPYALIVGQLGSTFKDGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLA
                     QKPQAILIALGWAMKGDGSLIKEYSVVALQGLTLVLFIFFMWVASRGMKSLKIVGSVA
                     GIAMFVMSLLYVAMAVTAPAITEVHIATTNITWETFIPHIDFTYITTISMLVFAVGGA
                     EKISPYVNQTRNPGKEFPKGMLCLAVMVAVCAILGSLAMGMMFDSRNIPDDLMTNGQY
                     YAFQKLGEYYNMGNTLMVIYAIANTLGQVAALVFSIDAPLKVLLGDADSKYIPASLCR
                     TNASGTPVNGYFLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAF
                     IAVVRLAQKYKPEYVFIRNKPLAMTVGIWCFAFTAFACLTGIFPKMEAFTAEWTFQLA
                     LNVATPFVLVGLGLIFPLLARKANSK"
     gene            complement(33695..34603)
                     /locus_tag="RHX79_001316"
     CDS             complement(33695..34603)
                     /locus_tag="RHX79_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2196510.1"
                     /translation="MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQR
                     LKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARV
                     AARIFLMPLLVGFTREYPDIHVELTTDDSLVDIVQQGFDAGVRLSGIVEKDMISVAIG
                     PPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNI
                     ILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLGDWSTERPGFQIYYPNRQY
                     MSCGLRAFLDYVKTGQICQSQRHRPQ"
     gene            34703..35293
                     /locus_tag="RHX79_001317"
     CDS             34703..35293
                     /locus_tag="RHX79_001317"
                     /EC_number="1.6.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H oxidoreductase"
                     /protein_id="HDV2196511.1"
                     /translation="MQSERIYLVWAHPRHDSLTANIADAIHQRAMERKIQVTELDLYR
                     RNFNPVMTSEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYI
                     DRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIED
                     ADVTFLCNTVVFDGQELHASYYQSLLSQVRDMVDAL"
     gene            complement(35375..36115)
                     /gene="pflA"
                     /locus_tag="RHX79_001318"
     CDS             complement(35375..36115)
                     /gene="pflA"
                     /locus_tag="RHX79_001318"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HDV2196512.1"
                     /translation="MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWD
                     THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHT
                     CLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANK
                     NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYK
                     LDGVKPPKKETMERVKGILEQYGHKVMF"
     gene            complement(36307..38589)
                     /gene="pflB"
                     /locus_tag="RHX79_001319"
     CDS             complement(36307..38589)
                     /gene="pflB"
                     /locus_tag="RHX79_001319"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HDV2196513.1"
                     /translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL
                     AGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQT
                     EAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTI
                     RLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS
                     FGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIW
                     ATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS
                     IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG
                     VDEKLKMQVGPKSEPIKGDVLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE
                     ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ
                     FGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGR
                     RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR
                     KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF
                     NSLTKEQQQDVITRTFTQSM"
     gene            complement(38644..39501)
                     /gene="focA"
                     /locus_tag="RHX79_001320"
     CDS             complement(38644..39501)
                     /gene="focA"
                     /locus_tag="RHX79_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HDV2196514.1"
                     /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF
                     ISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKAS
                     GRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHT
                     FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP
                     MGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWV
                     IYLRENDHH"
BASE COUNT         9850 a         9698 c        10470 g         9597 t
ORIGIN      
        1 cggctaccgg gtcgggcgcg aggtaacgtc ctgtaagacg cgccctcagc ccacatccat
       61 gtgggctgcc ccggccttcg gggaacgctt cagcgatttt gacgccacca acacccgtgc
      121 ggtttgtaac gtcgaagata aaacaaccag ggcagataaa atgccaatgc taattaatta
      181 cgtttttcca gcagggtccg gtaaatcaga ccaccgataa tgccgccgac aattggcacc
      241 acccagaaga accacagttg ttctaatgcc cagccgccct ggaagatagc aaccgcggtg
      301 ctgcgcgccg ggttaacaga agtgttagtc accggaatac taattaagtg aatcagggtt
      361 aaggccagac caatagcgat cggcgcaaaa cctgccggcg cgaatttgtc ggttgcgccg
      421 tggatcacca acaggaaacc tgcactcaat accagttcaa ctaccagcgc ggaaagcatg
      481 gaataaccgc ctggtgaatg ctcgccataa ccgttagaag caaaaccgct ggctgccgcg
      541 tcaaaacccg ttttaccact ggcaattaaa tacagcagcg ccgctgcaac aataccgccg
      601 acaacctggg caattacgta gccaacgact tcttttgccg gaaaacgtcc gccagcccat
      661 aaaccaatag tgaccgccgg gttaaaatga ccaccagaaa tatgaccaac agcaaaggcc
      721 atcgtcagaa cggtcagacc gaacgccaac gccacgccgg caaaaccaat gcctaattcc
      781 gggaagcctg cggccagtac agcactacca cagccaccaa aaacaagcca gaaagtacca
      841 aaacattcag ctgctaattt tctgaacata tccacctcaa ttaaaaattg accctgtgaa
      901 aaatatggtc gttttatagg gtcgtcgtaa aaaagtgacg acggaaataa tgcgcggcta
      961 ttttaaaaac gaaggcgagt cattcaccag ataaataaat ccagtaaatt tgatttaggg
     1021 caacagcggg ttgccccata tagtcatttg tctgattgac agtgtagtgc aagcaaaaga
     1081 tttaatcctt taggcgtaat aaaaaataat ttatcatgct aattatttga ttttgttgtt
     1141 tttgcagact tatcagcaag agggagtata acgcgattat tcgctcattt ttcagacatt
     1201 tgccatgctt aaatgtgatg tcatcacgta ttagcaaggc ctttcccgtt atactgccag
     1261 cgtaaaggat aagtcacata tttctggagg ggatatgatt cttgagcgcg ttgaaattgt
     1321 gggttttcgc ggtatcaacc gtttgtcgtt gatgctcgaa caaaacaacg tcctgattgg
     1381 ggagaacgcg tggggtaaat ccagcttgct ggacgcctta accctgctgc tatcgccaga
     1441 atcagatctc taccattttg agcgcgacga tttctggttc ccgccgggag atatcaacgg
     1501 gcgagaacat catctgcata ttattttgac cttccgcgaa tcgctgccag gccgacatcg
     1561 ggttcgccgt tatcggccgc tggaagcgtg ctggacgcca tgcaccgatg gctatcaccg
     1621 tattttttat cgtctggaag gggagagtgc ggaagacggc agcgtgatga cactgcgcag
     1681 ttttctcgat aaagacggac atccgattga tgtcgaggat attaacgatc aggcacgcca
     1741 tctggtgcgt ttaatgccgg tgctgcgctt gcgtgatgcc cgttttatgc gccgtattcg
     1801 taacggcacg gtgccaaatg tccccaatgt ggaagtcacc gcgcgccagc tcgatttcct
     1861 cgcccgtgag ttgtcctcac atccgcaaaa tctctctgat ggacagattc gtcagggact
     1921 ttccgcaatg gtgcagttgc ttgagcatta tttctctgag cagggggctg gacaggcgcg
     1981 atatcgttta atgcggcggc gggccagcaa tgagcaacga agctggcgct atctggatat
     2041 catcaaccgg atggttgacc gacctggagg gcgctcgtat cgggttattt tgctcggcct
     2101 gtttgcaact ttattgcagg caaaaggcac attgcgactg gataaagacg cccgtccatt
     2161 gttgctgatt gaagatccag aaacccgttt acaccccatt atgctttcag ttgcctggca
     2221 tctgttgaat cttctgccat tgcagcgcat tgccaccacc aactcgggtg agttgctttc
     2281 gttaactcca gtggaacatg tttgccgcct ggtgcgtgaa tcttctcgtg ttgccgcctg
     2341 gcgtctgggg ccaagtggct tgagcaccga agacagccgc cgcatctctt ttcacattcg
     2401 ttttaatcgt ccgtcatcgc tgtttgctcg ctgctggttg ctggtggaag gggaaacaga
     2461 aacctgggtt atcaacgaac tggcgcgcca gtgtggacac catttcgatg ccgaagggat
     2521 taaggtcatt gagtttgccc agtccgggct aaagccactg gttaaatttg cccgccgaat
     2581 ggggattgaa tggcatgtac tggtcgatgg cgatgaagca gggaagaaat atgccgctac
     2641 ggtacgcagc ctgttgaata atgatcggga agccgaacga gaacatttaa cggcgttacc
     2701 ggcgctggat atggaacatt ttatgtatcg ccagggattt tccgatgtgt tccaccgcgt
     2761 ggcgcaaatc ccggaaaatg taccgatgaa tctgcgcaaa attatctcga aagcgatcca
     2821 tcgctcttcc aaacccgatc ttgccattga agtggcaatg gaggccggac gtcgtggtgt
     2881 ggactccgta ccgacgctgc tgaaaaaaat gttctcacgc gtgctgtggc tggcgcgcgg
     2941 tcgcgcggat taaccgcgaa acatcgtggc catttgtggc tgaatagcgt cgagcatctc
     3001 atagcgccga cggtattcag cccgtttttt actggcgatt tcggcaatct cttttcgtgc
     3061 tatctgtgct ggaaggcggt aatggcgttc agcatcacat acgccgccaa ccgattccca
     3121 gaaagcgttg taatcagcgt ggatcttgcc ttctttatcg cgataacgca ggctgcggta
     3181 aatatgcgtt tcattgctga cggcaataat ctgctctacc tgcaaacgtt gggcaaacag
     3241 acaggccgct tccatcacga ggcgtttggg aaatagcccg tggcaggctt tcgtcgcatt
     3301 ctggatttcc tgatgtggaa tttcccattt tgcgccttgc agtccgccaa taaacatcgt
     3361 tcttttcccc tgatattcac acagggtaaa cgtgatctct gccagaggaa taccttcgct
     3421 gttgcggaac aggattgtgc tgtcaccttc tttatccatt gagatcatca tggtcagctc
     3481 aagcgtgaac tgctcgccgt ttttgccttc cagcttcgcc agttgcagcc cgggggtatt
     3541 caaatataag ctgaattctt ccgccgacat acatccgcgg agtaacgcat aatggtaacg
     3601 taacgcctcc agcaattgct tacggctaag attcgccgca aggtaagggc gatgcagacg
     3661 cacaggcagt cgcggctggc gcgttaacaa cacattgaga ttaggccagt gggaaagttc
     3721 gttcatccac tcaacgctta aacgcggcat aatcaacgag cgcagcaaaa atttctggcg
     3781 aaaactacgg cgatgccaga atttacccgg ccgacactgt ccacgtgcca gactaagaaa
     3841 aagtgacagg ctgctgagag attcagatgg cgtaaaggtc cgttcagtta gctgcgacat
     3901 attcatgaaa tcaatggtta tacatgacgt cgatttcacc attgcgtatc ttaaccaaac
     3961 atcaatagtg tgattactaa cgtaaatttt agggttttgt tgatatttcg ttgaagttaa
     4021 tgacccggat tggcatatgg agtattcaga atatttatga aaaagcggaa aaccgtgaag
     4081 aagcgttacg ttattgcgct ggtgatagtc atcgccggac tgattacgtt atggagaatt
     4141 cttaacgcac ccgtgccgac ttatcagaca ctgattgtgc gccccggtga tttacagcaa
     4201 agcgtgctgg cgaccggaaa gctggacgcg ctgcgtaagg ttgacgtggg cgcgcaggtc
     4261 agcggtcagt tgaaaactct gtcggtggcg attggcgata aagtaaaaaa agaccagctt
     4321 ttaggggtta ttgatcctga acaggctgaa aaccagatta aggaggtcga agcaacgctg
     4381 atggagctac gtgcgcagcg gcagcaggcg gaagcggagc tgaaactggc gcgggtgacg
     4441 tattcccgtc agcaacgtct ggcacaaacg caggcggttt cacagcagga tctcgacacc
     4501 gccgcgacgg agatggctgt gaaacaggcg caaattggca ccattgacgc gcaaatcaag
     4561 cgcaatcagg cctctctcga tacggctaaa accaatctcg attacactcg catcgttgcc
     4621 ccgatggccg gggaagtcac gcaaatcacc actctgcaag gccagacggt gattgccgca
     4681 caacaagcac cgaacattct gacgctggca gatatgagca ccatgctggt aaaagcgcag
     4741 gtttctgaag cggatgtaat ccacctgaag ccggggcaaa aagcctggtt tacggtactt
     4801 ggcgatccac tgacgcgcta cgaggggcaa atcaaggatg tactaccgac gccggaaaag
     4861 gttaacgacg ctattttcta ttacgcccgt tttgaagtcc ccaaccccaa tggtttgctg
     4921 cggctggata tgactgcgca agtgcatatt cagctcaccg atgtgaaaaa tgtgctgacg
     4981 atccctctgt cggcgttagg cgatccggtt ggcgataatc gttataaagt caaattgttg
     5041 cgtaatggtg aaacacgcga gcgtgaagtg acgattggcg cacgtaacga taccgatgtt
     5101 gagattgtca aagggcttga agcgggcgat gaagtggtga ttggtgaggc caaaccagga
     5161 gctgcacaat gacgcctttg ctcgaattaa aggatattcg tcgcagctat cctgccggtg
     5221 atgagcaggt tgaggtgctg aagggcatca ccctcgatat ttatgccggt gagatggtag
     5281 cgattgttgg cgcttcaggt tccggtaaat cgaccctgat gaatattctc ggctgtctgg
     5341 ataaggccac cagcggcacc tatcgcgtcg ccggtcagga tgttgccaca ctggacgccg
     5401 atgcgctggc gcaactgcgc cgcgagcatt tcggctttat tttccagcgt taccatttac
     5461 tttcgcattt aaccgccgag cagaacgttg aagtacccgc cgtctatgcc ggtcttgagc
     5521 ggaaacagcg gctgcttcgc gcccaggggt tactgcaacg actggggctg gaagaccgta
     5581 cagagtatta tccggcacag ctttcgggtg gtcagcaaca gcgcgtcagc atcgcgcggg
     5641 cattgatgaa cggcggtcag gtaattcttg ccgatgaacc aaccggcgca ctggacagcc
     5701 attctggcga agaggtgatg gcgatcctgc atcagctgcg cgatcgcggg catacggtga
     5761 ttatcgtcac ccacgatccg caggtcgctg ctcaggccga gcgggtgatc gaaattcgcg
     5821 acggcgaaat tgtgcgcaat cctcccgcca ttgaaaaagt gaatgttgct ggcgggacgg
     5881 agcctgttgt caacacggtg tctggctggc ggcagtttgt cagcggtttt aacgaggcgc
     5941 tgacgatggc atggcgggcg ctggcagcga ataaaatgcg tactttactg accatgctgg
     6001 ggattattat cggtattgcg tcggtggttt ccattgtcgt ggtgggtgac gccgccaaac
     6061 aaatggtgct ggcggatatt cgttctattg gtacgaatac tattgatgtc tatcccggga
     6121 aagattttgg cgatgacgat ccgcaatatc agcaggcgct gaagtacgac gacttaatcg
     6181 ccatccaaaa acaaccgtgg gtcgcctcag ccacacctgc cgtctcgcaa aacctgcgcc
     6241 tgcgttataa caatgttgat gttgctgcca gtgccaatgg cgtgagcggc gattatttta
     6301 atgtctatgg catgaccttc agtgaaggaa acacctttaa tcaggagcag ctgaacggtc
     6361 gtgcgcaggt cgtggttctc gacagtaata ctcgccgcca gcttttcccc cataaagcag
     6421 atgtggttgg cgaggtgatt ctggtcggca atatgcccgc cagagtcatt ggtgtggcgg
     6481 aagaaaaaca gtcgatgttt ggtagcagta aagtgctgcg tgtctggcta ccttacagca
     6541 cgatgtccgg gcgagttatg ggccagtcgt ggctgaactc cattactgtc agggtaaaag
     6601 aaggatttga cagcgccgag gcggaacagc aactcacgcg tttactttca ctgcgccacg
     6661 gaaagaagga tttctttacc tggaacatgg acggcgtctt gaaaactgtt gaaaagacca
     6721 cacgtacttt acaactgttt ctgacgctgg tggcggtgat ttcgctggtg gtgggcggta
     6781 ttggtgtaat gaatattatg ctggtgtcag tgaccgagcg gacgcgggaa attggcattc
     6841 gcatggctgt aggtgcgcga gcaagcgatg ttttgcaaca gttcctgatc gaagccgtac
     6901 tggtttgcct ggtcggtggc gcgttgggaa taactctgtc actgttaatt gctttcatct
     6961 tgcagctttt cttacccggc tgggagattg gtttttcacc gttggcactg ctgctggcgt
     7021 ttctctgctc gacggccacc gggattttat ttggatggtt acccgcacga aatgcggcac
     7081 gactggatcc agtagatgct ctggcacgag agtaattttt gagataaaaa tgccagccga
     7141 tcgggctggc attttgcctt taggatgtac acaatgagac agaagagcta tgcgactgcc
     7201 gcttctactt cgacgggcac aataacactg gcgtgattgc cttttggccc ctggtggaca
     7261 tcaaactgaa cggattgtcc agcttttagc gttctgtaac catccatctg aatggtggaa
     7321 taatgagcga aaatatcttc gccgccgcct tcagggcaga tgaaaccaaa ccctttggca
     7381 ttgttgaacc acttaacagt acccttttcc atgcttcgac atccttcgca aatcttatac
     7441 aagtaagatg gaataaaccg gggtcagaga gggggctgtt caaaacctcg ccaactctag
     7501 aaatacaatt tagagaatta gggcgagccg tcaagcgttt gacaggggcc agggggcagg
     7561 tatgaatcaa aaatttgaag cagttaacgc tattgacagg aatgtgacag atgtcgctga
     7621 tgccaacgat agatgatagt tatctatcat gtggagtaga ttggtcaggc aaataagctc
     7681 ttgtcagcgg cagggcgttc tgccgataac cgtaaccgaa gatgataact gacaatgggt
     7741 aaaacgaacg actggctgga ctttgatcaa ctggcggaag aaaaagttcg cgacgcgcta
     7801 aaaccgccat ctatgtataa agtgatatta gtcaatgatg attacactcc gatggagttt
     7861 gttattgacg tgttacaaaa attcttttct tatgatgtag aacgtgcaac gcaattgatg
     7921 ctcgctgttc actaccaggg gaaggccatt tgcggagtct ttaccgccga ggttgcagaa
     7981 accaaagtgg cgatggtgaa caagtacgcg agggagaatg agcatccatt gctgtgtacg
     8041 ctagaaaaag cctgaatgca ggcataaaaa ttgggggagg tgcctatgct caatcaagaa
     8101 ctggaactca gtttaaatat ggctttcgcc agagcgcgcg agcaccgtca tgagtttatg
     8161 accgtcgagc acttgttact ggcgctgctc agtaacccat ctgcccggga ggcgctggaa
     8221 gcgtgttctg tggatttggt tgcgctccgt caggaactgg aagcctttat tgaacaaacc
     8281 acacccgttc tgcctgccag tgaagaggag cgcgacacac agccgacgct gagttttcag
     8341 cgtgtactgc aacgtgcggt cttccatgtc cagtcctccg gtcgcaatga ggtaaccggt
     8401 gcaaacgttc tggtcgctat ctttagcgaa caggagtcgc aggcggcata tctgttgcgt
     8461 aaacatgaag tcagccgtct cgatgtggtg aactttatct ctcatggcac gcgtaaagac
     8521 gagccgacac agtcttctga tcctggcagc cagccaaaca gcgaagaaca agctggtggg
     8581 gaggaacgta tggagaattt cacgacgaac ctgaatcagc ttgcgcgcgt gggcggaatc
     8641 gacccactga ttggtcgtga gaaggagctg gagcgtgcta ttcaggttct ctgccgtcgc
     8701 cgtaaaaaca acccgctgct ggtgggggaa tctggtgtcg gtaaaaccgc gattgcggaa
     8761 ggtcttgcct ggcgaattgt tcagggcgat gtgccggaag tgatggctga ctgtacgatt
     8821 tactctctcg atatcggttc tctgttagcg ggcactaaat atcgcggcga ctttgaaaaa
     8881 cgttttaaag cgttgctcaa gcagctggag caggacacta acagcatcct gtttattgat
     8941 gagatccaca ccattatcgg tgcgggtgca gcgtctggtg gccaggttga tgcggctaac
     9001 ctgatcaaac cgttgctctc cagcggtaaa attcgcgtaa ttggttcgac aacctatcag
     9061 gagttcagca acattttcga gaaagaccgt gctctggcgc gtcgcttcca gaaaattgat
     9121 attactgaac cgtcgatcga agaaactgtt caaatcatca atggcctgaa accgaagtat
     9181 gaagcgcacc acgacgtgcg ttataccgca aaagcggtgc gtgcagcggt agagctggcg
     9241 gtgaaataca ttaacgatcg tcatctgccg gataaagcca ttgacgttat cgacgaagcg
     9301 ggcgctcgcg cacgcctgat gccggtaagc aaacgcaaga aaaccgttaa tgtggcggat
     9361 attgagtccg tggtggcccg tattgcgcgc attccagaga agagtgtttc tcagagtgac
     9421 cgcgataccc tgaaaaacct cggcgatcgc ctgaaaatgc tggtcttcgg tcaggataaa
     9481 gccattgagg cgctgactga agccattaag atggcgcgtg caggtttagg tcacgaacat
     9541 aaaccggtcg gttcgttcct gtttgccggc cctaccgggg tcgggaaaac agaggtgacg
     9601 gtacagcttt cgaaagcttt gggcattgag cttctgcgct ttgatatgtc cgagtatatg
     9661 gaacgccata ccgtcagccg tctgattggt gcgcctccgg gatacgttgg ttttgatcag
     9721 ggcggtttgc tgactgatgc ggtcatcaag catccacatg cggtgcttct gctggacgaa
     9781 atcgagaaag cgcacccaga cgtgttcaat attctgttgc aggtgatgga caacggtacg
     9841 ctgaccgata acaacggacg caaagcagac ttccgtaacg tggtgctggt gatgaccacc
     9901 aatgccgggg tacgggaaac tgagcgcaaa tccattggtc ttatccacca ggataacagc
     9961 accgatgcga tggaagagat caagaagatc tttacaccgg aattccgtaa ccgtctcgac
    10021 aacattatct ggttcgatca tctgtcaacc gacgtgatcc atcaggtggt ggataaattc
    10081 atcgtcgagt tgcaggttca gctggatcag aaaggtgttt ctctggaagt gagccaggaa
    10141 gcgcgtaact ggctggccga gaaaggttac gaccgggcaa tgggcgctcg tccgatggcg
    10201 cgtgtcatcc aggacaacct gaaaaaaccg ctcgccaacg aactgctgtt tggttcgctg
    10261 gtggacggcg gtcaggtgac ggttgcgctg gataaagaga aaaatgagct gacttacgga
    10321 ttccagagtg cacaaaagca caaggcggaa gcagcgcatt aatctgattg ttaggtaggt
    10381 tggtgaagtc cgtaatctcg tcaggggtta cggacttttt atttatgggg tggaacggtg
    10441 aaaaccctat ttttggaggt gaaggtaagt tgttgataat tagtgctgct ggaaggtaag
    10501 gataaaaaag ggtgctgcag gagaatggga tggttttgct ttattaacaa cgggctaaac
    10561 gtgtagtatt tgagttcact gccgtacagg cagcttagaa atcgacgggg tgcggtaaaa
    10621 cctttgcgaa cgcgttcact gccgtacagg cagcttagaa attcacaggt aacatactcc
    10681 acccgcccac catgttcact gccgtacaga cagataaaat gcgaaaaaaa agctcgcact
    10741 ttcgtacgag ctcttcttta aatatggcgg tgaggggggg attcgaaccc ccgatacgtt
    10801 gccgtataca cactttccag gcgtgctcct tcagccactc ggacacctca ccaaattgtt
    10861 ttgctaccaa acctcatggg tggcaacggg gcgctactat agggagttgg agtaaaacgg
    10921 tcaagaagaa ttttaatgat aattgttgtt tgctcatact gtaaacaagt tgtgcagtat
    10981 atctacatcg agacaagtta cggacttata cttccaaagt acttcataca tatcacaaaa
    11041 taaaaaggcc ggttaaaccg accttttact cgttctttct cttcgcccat caggcggtaa
    11101 aacaatcagc gactacggaa gacaatgcgg cctttgctca ggtcgtacgg ggtcagttca
    11161 acagtcactt tgtcgcccgt caggatgcgg atgtagtttt tgcgcatttt accggagatg
    11221 tgtgcagtaa ccacgtgacc gttttctaac tctacgcgga acatggtatt aggcaacgtt
    11281 tcaagaacgg taccttgcat ttcaatattg tcttctttgg ccatctaatc ctctggggta
    11341 tcactaccgt aatttgaacc ggcaagataa tgccgaagtt ctgtaaataa gtaaagattt
    11401 gcgcgctaaa tcgcaacaaa caggttcggc acattactcc gaaaacacac ggctaagccg
    11461 caccaaaagc gcaacgtata agggagcggt gagataaacg atgggcgtta cctgacgcga
    11521 aaaattcctt atcggcagcg gggtaatgag cgtaaccaac tctgcgaccg caattataac
    11581 actctgggga gaaatgtgcc gaaaacattc attcttgtgg tgaaaacaag catcgtggta
    11641 cccagaaatt attcggcaat cgtccgaggc gcatttgatt gagataatta aggtaatccc
    11701 ggcggggaat ttcgcaggca ccaagcgacg ctgtgtgatc gttaaggacc tggcagtcga
    11761 taagcttacc gccatgaccg ataaaatcct cacagaatac cagaagcgcc gttttagacg
    11821 cattttccat ccggctgaac atggactcgc cacaaaatag cgttccctgg gccacgccgt
    11881 acataccgcc gacaagctca tcttcacgcc agacttcaat ggagtgggca tgaccgagtt
    11941 cgtgaaggcg atggtaggct tcgaccacgc cacgcgtgat ccaggttcct tcttcgcgat
    12001 cgctggcaca gccttcaatg acctgaccaa aagcgtaatt catcgtgaca cgatagggcg
    12061 agcgtttatg aaatcgcatc atactacggc tgatatgcag tgattctggc catagcaccg
    12121 cgcggggatc gggcgaccac cagaggatgg ggtcgcctgg agaaaaccac ggaaaaatac
    12181 cacgctggta agccattaac aggcgcgcag ggctaagatc gcccccaagt gccagcaggc
    12241 cgttaggctc acgtaatgcg ccttccgggg aagggaaggc tattgaatgg cgagaaagct
    12301 gaaccaggcg catgaccgca aaactccacg caagtcggat cgttcaataa tagcttacaa
    12361 accctgcttg aactggtaat aacgcccctg tctggcaagc agctctgcgt gagtaccttg
    12421 ctcaataatt tgcccgttgt ccatcactat tatttgttgg aaacgagaga gtccgcgaag
    12481 tcgatgggtg accattaaca ccgttttctc acgcatcatt tctgcaagca attcaaggat
    12541 ctggctttcg gttgtggcat ctaagccttc ggtaggttca tccagcaaca ccagtggcgc
    12601 atcatgtaac agcgcacggg cgatagccag acggcgcagt tcaccaccgg agagctggcg
    12661 tccgccttca cctaaccaac tgttgagacc tgcatcctcg agcagcttct ccaggccaac
    12721 gcgacgcaag ctctccgcca gagcgtcatc actactgcca ggcgaggcga gtaacagatt
    12781 atcacgcagc gtggcgctaa acagatgcac tcgctgagga acaacgctga tggtctgtcg
    12841 tagagccgct tcattcaggc tggctatggg gctatcgtta agcaaaatct cgccctgttg
    12901 cgggtcccaa gcgcgggtca gcagttgtaa cagtgttgat ttgccgcatc cggttcgccc
    12961 gagaatcgca atatgttccc cggcgtttac ctgaagagaa atccctttaa gtgcctgttg
    13021 ggattgctcc ggataagtga actgaacatc ccgtaatgtc agcgaaacgc gatcggcaac
    13081 acgagtttgg gtatcaggga aggtgacttc cggtttttga tccgttaaat cagtgatccg
    13141 aacggcagag gcaatgactt gccccagatg ctgaaatgca cccgttactg gtgccagtgc
    13201 ttcaaacgcg gctaacgcgc agaagacaaa cagggcaatt aacgcgccgg gttgagcatt
    13261 gccgccaacg ccgccagacg ccatccacag catcaggatc accgctaacg cgccaatgag
    13321 tagcattatc gcttgcgaca atgcggtcag ttcagattga cggcgttgcg cttccagcca
    13381 ttgaatttct gtattctcta gttgcgtgcg ataacgatcg ctggcaccaa aaatggtcag
    13441 ctcagcttgc ccttgcagcc aggccgtcag ttgttggcga tactgtccgc gaagatgagt
    13501 cagattttgc ccggtgcttt ttcccgcacg ataaaacagc ggtggcatca ggaaaagcgt
    13561 cagtaacata atgccgccca gcgtaaaggc gagggtgaaa tcaaggaaac ttaacccgat
    13621 tgtcaccacc ataatcacca caaaagcgcc caccagcggc gagataacgc gcagataaag
    13681 atgatcgagc gtatcaacat ccgccaccac gcgattgagc aattcgccct gacgatagcg
    13741 cgccagtccg gcaggggaga ggggcagcaa tttgctgaag gtgtaaatgc gcagatgctg
    13801 caacacgcgg aaagtcgcgt cgtgacttac cagacgttca aaataacgcc cggcagtacg
    13861 ggtgattgct gcgccacgca cgcccgcagc gggtagcata tagttgaagc tgtacagtcc
    13921 ggcaaccccc gcaaccgctg aggccgagag gaaccagccg gaaagtgtca acagaccgat
    13981 actggcgagc agcgtgacaa ttgccagcac gataccaaga cttaacatcc atttatgacg
    14041 tttatacagt gccagatagg gtagcaaagc gcgcatttaa atctcctcct gacgatgggc
    14101 cagtaatgtg gcgaatgggc caccagccac acttaattcc gcgtaacgtc cttgctcaat
    14161 aatccggcca tcctgcataa cccaaatgac atcccagtca gcaagatctt ctaactggtg
    14221 ggtgaccatt aacgttgtct ggcgcagaga ggcggcattc agcgcctcca ttacgcgctg
    14281 ttcactgtga gcatcaaggc tggcagcggg ttcatccaac agtaatagcg aacagggatt
    14341 tagtaacgca cgggccaccg ccacgcgctg cgcctgcccc acggaaaggc gggcagcctg
    14401 gtcgccaaca ggcgtatcaa cgccttgtgg caggagcggt agaaactcgc tgacccaggc
    14461 gttatccagc gctgcttgta attcttgttc gctggcatca ggtcgcgcca gtagtacgtt
    14521 atcccgcaat gttgctgccg gtaattgtgg gttttgccca acccaggaga gatgtttacg
    14581 ccatgattct ggtgataaat cgcgtaattc tatcccgttg attcgtaatg atccctgata
    14641 tgaaagaaaa ccagaaagcg cgttcagcag tgagctttta cctgaaccgc tgcgaccaac
    14701 caacactgca cgttggcctg ctggcaaagt aaagttcagc ggtccggcca gcgttttacc
    14761 ttccggcgac gtgataaaca gatcctcggc ctcaatggtc accggatcgg tcgatgctaa
    14821 ttccgcctca ccgcgctgcg gatgggcgag cggggtttcc ataaacgttt tcagactgtc
    14881 agctgcacca acagcctggg ctttagcatg ataaaacgta ccgagatcgc gcaatggctg
    14941 gaaaaactct ggcgcaagga tcagggccag aaaacccgca gccagcgtca caccggtatc
    15001 gtagtgacca aaatccagct cgccgagata ggaaaaacca aagtagaccg ccaccagagc
    15061 aattgacagc gaggtaaaaa attcgagaat gccggaggat aaaaacgcca gccgtagcac
    15121 ttccattgtc cgttggcgga aatcttccga agcagaacga atactttcaa tttcagcttc
    15181 accacgacca aaaatacgca atgtttccat gccgcgcagg cgatcgagga aatgcccact
    15241 taagcgagca agagcgagaa agttacgccg gttagcatcg gcagccccca tcccaaccag
    15301 cgccataaac aacggaatta acggtgctgt gcccagcaga atgagcgccg cagcccagtt
    15361 agaggggaag atcgccacca caatcagcaa cggcaccgac actgccagcg ccatttgcgg
    15421 caggtagcgt gcatagtaat catgcatatc gtcaatttgc tcgagtacca acgtcgccca
    15481 gctccccgca ggtttaccct gaatccacgc tggccctgct tgttgcagac ggtcgagaac
    15541 ctgacggcgg atggcaaagc ggatatgctg cccggcgtga taacccaccc gttcgcgtaa
    15601 ccagaccacc catgcgcgca gtacaaaggt cagaaccagt aacgtaaagg gaagcagcag
    15661 ggcttcacgg ggaatattct ccataatcat atgttgcaga attcgcgcca tgaaccaggc
    15721 ctgggcaatg atcaatatgc cgcttacaaa gcccagcaga cgagaaatat tcagccaacg
    15781 ttgggagatg acgctttgct gttttaacca gcgggttaac tctttttgac gggatttatt
    15841 cattgcacgc ttagcaggtg agttatcaga attatttgca gagcaatgtt acaacgggga
    15901 aaaaataaag gcgacccata gtcgcatggt gtcgccttct ttacttttgt tactgatttg
    15961 taaaattatt ttgcgtcagc taaaccatcg aggtagcgtt ccgcatcaag tgctgccatg
    16021 cagcctgtac cggccgaagt aatggcctga cgataaatat gatccatcac gtcacccgcg
    16081 gcaaagacgc cagggatgct ggtctgggtg gcattaccat gaatacccga ctgcactttg
    16141 atgtagccgt tttccagttc cagctgccct tcgaaaatgg cagtattcgg gctgtgaccg
    16201 atagcaacaa acagaccagc aacgtcgagt gactcgatgt tatcgctgtt ttgcgtatcg
    16261 cgcagacgaa cgccagtgac acccatttga tcgccggtca cttcttccag cgtacggttg
    16321 gtgtgcagaa tgatgttgcc gttctccact ttatccatca gacgcttaat aaggattttt
    16381 tccgcgcgga aaccgtcacg gcggtgaatc agatgcactt ccgaagcgat gttagacaga
    16441 tacagcgcct cttcaaccgc ggtattgccg ccgccgatga ccgcaacttt ctggttacga
    16501 tagaagaaac cgtcgcaggt tgcacaagca gaaaccccac ggcctttaaa ggcttcttca
    16561 gagggcaggc cgagatagcg tgcagaagct ccggtggcaa taatcagcgc gtcgcaagtg
    16621 tattcgccgt tatcgccatt cagacggaac ggacggtttt gcagatccac cttgttgata
    16681 tgatcaaaaa tgatctcagt ttcaaacttg gtggcatgtt cgtgcatgcg ctccattaat
    16741 aacggaccgg tcagatcgtt tggatcgcca ggccagtttt ccacttccgt ggtggtggtc
    16801 agttggccgc ctttttccat gccggtaatc agcacaggtt gcaggttggc gcgcgccgcg
    16861 tagacagcag cggtgtatcc cgccgggcct gaacccagga taagcagttt actgtgtttg
    16921 gtcgtgccca tgagatcccc atagttgttg gcagacaatg ggcaggattg tagggaattt
    16981 acagacgtaa aaaaagagta tgacgatttt gttaacaatt tgtgcaatcg gcagcatcga
    17041 taagcaggtc aaattctccc gtcattatca cctctgctac ttaaatttcc cgctttataa
    17101 gccgattaaa tgatgaataa acgcccctgt taatgaatat ctggcatgtt gtactaaaaa
    17161 tcgatgtttt gctttgacaa tcccctggtg ttttgcgaaa acattcgagg aagaaaaaaa
    17221 acagtattct tatatgcgca taaccatgca tgtaaatacc atgtttaccg tgctagtgaa
    17281 atctacgtat ggcgtggaca gacgccattc gtgatgtcga tagctgccac aaggcaacgg
    17341 tcttctcacc gtagacccag gcattgcgcg ccgtgaatct tcatgatttc ggtctatcgt
    17401 gacgggtagc gactctgaac agtgatgttt cagggtcaga caggagtagg gaaggaatac
    17461 agagagacaa taataatggt agatagcaag aagcgccctg gcaaagatct cgaccgtatc
    17521 gatcgtaaca ttcttaatga gttgcaaaag gatgggcgta tttctaacgt cgagctttct
    17581 aaacgtgtgg gactttcccc aacgccgtgc cttgagcgtg tgcgtcggct ggaaagacaa
    17641 gggtttattc agggctatac ggcgctgctt aacccccatt atctggatgc atcacttctg
    17701 gtattcgttg agattactct gaatcgtggc gcaccggatg tgtttgaaca attcaatacc
    17761 gctgtacaaa aacttgaaga aattcaggag tgtcatttag tatctggtga tttcgactac
    17821 ctgttgaaaa cacgcgtgcc ggatatgtca gcttaccgta agttgctggg ggaaaccctg
    17881 ctgcgtctgc ctggcgtcaa tgacacacgg acatacgttg ttatggaaga agtcaagcag
    17941 agtaatcgtc tggttattaa gacgcgctaa cacggaacag gtgcaaaatc ggcgtatttt
    18001 gattacactc ctgttaatcc atacagcaac agtactgggg taacctggta ctgttgtccg
    18061 ttttagcatc gggcaggaaa agcctgtaac ctggagagcc tttcttgagc caggaataca
    18121 ctgaagacaa agaagtcaca ttgacaaagt taagtagcgg ccgtcgcctt ctggaagcgt
    18181 tgctgatcct tattgtcctg tttgccgtct ggttgatggc tgccttacta agctttaacc
    18241 cttcggaccc cagctggtcg caaacggcct ggcatgaacc tatccataat ttaggtggga
    18301 tgcccggtgc gtggctggca gatacgctgt tctttatttt tggcgtgatg gcttacacca
    18361 ttcccgtcat tattgtcggc ggttgttggt ttgcctggcg tcatcagtcc agtgacgaat
    18421 acattgatta ttttgccgtt tcgctacgca tcattggcgt tttggcgctc atccttacct
    18481 cctgtggtct ggcggcaatc aacgctgacg atatctggta ttttgcctcc ggtggcgtca
    18541 ttggcagctt actaagcact acgctacaac cactgctaca cagtagcggg ggaactattg
    18601 cgctgctctg cgtttgggct gcgggcctga cgctgttcac cggttggtca tgggtgacca
    18661 ttgctgaaaa actcggcggc tggattttaa acattctcac cttcgccagt aatcgtaccc
    18721 gtcgcgatga tacctgggtc gatgaagatg aatatgaaga tgacgaagag tatgaagatg
    18781 aaaaccacgg caaacagcat gaatcacgcc gtgcccgtat tcttcgcggc gcgctagcgc
    18841 gtcgtaaacg gttggcggaa aaattcatta atccgatggg gcggcaaaca gacgctgcgt
    18901 tgttctccgg taagcggatg gatgatgacg aagagattat ctacactgca cgcggtgtgg
    18961 ctgccgaccc ggacgacgtc ctattttcgg gcaatcgtgc aacgcagcca gaatatgacg
    19021 aatacgatcc attattaaac ggtgcgccaa ttaccgaacc tgtcgctgta gcagctgctg
    19081 ctaccacggc gacacaaagc tgggctgcgc cggttgaacc tgtgactcag acgccgcctg
    19141 ttgcctctgt tgatgttcca ccttcgcaac ctacagtagc ctggcagcct gtaccgggtc
    19201 cacaaacggg agagccggtt attgctcctg caccggaagg ttacccacag cagtcacaat
    19261 atgcacagcc tgcagtgcaa tataatgagc cgctgcaaca accagtacag ccgcagcagc
    19321 cgtattatgc acctgcagct gaacaacctg cgcaacaacc ttactacgct cctgcggcgg
    19381 aacaacctgt tcagcaaccg tattacgccc ctgcgccaga acaaccggtg gcaggtaacg
    19441 cctggcaagc cgaagagcag caatccactt ttgctccaca gtctacatac cagactgagc
    19501 aaacttatca gcaaccagcc gctcaggagc cgttgtacca acagccgcaa tccgttgaac
    19561 agcagcctgt tgtggagcct gaacccgttg tagaagagac aaaacccgcg cgtccgccgc
    19621 tttactattt tgaagaagtg gaagagaagc gagcccgtga acgtgaacaa cttgcggcct
    19681 ggtatcaacc gattccagaa ccggttaaag aaccagaacc gatcaaatct tcgttgaaag
    19741 cgccttctgt tgcagcagta cctccagtag aagccgctgc cgctgtttct ccgctggcat
    19801 ctggcgtgaa aaaagcgaca ctggcgacgg gggctgccgc aaccgttgcc gcgccagtct
    19861 tcagtctggc aaatagcggt ggaccgcgtc cgcaagtcaa agaggggatt ggcccgcagt
    19921 tgccacgacc gaaacgtatc cgcgtgccaa ctcgtcgtga actggcgtct tacggtatta
    19981 agctgccctc acagcgtgcg gcggaagaga aagcccgtga agcccagcgc aatcagtatg
    20041 attctggcga tcagtataac gatgatgaaa tcgatgcgat gcagcaggat gaactggcac
    20101 gtcagttcgc ccagacacag cagcaacgct atggcgaaca gtatcaacat gatgtgcccg
    20161 taaacgcaga agatgcagat gctgcggcag aggctgaact ggctcgtcag tttgcgcaaa
    20221 ctcaacaaca acgttattcc ggcgaacaac cggctggggc gaatccgttc tcgctggatg
    20281 attttgaatt ttcgccaatg aaagcgttgc tggatgatgg tccacacgaa ccgttgttta
    20341 cgccaattgt tgaacctgta cagcagccgc aacaaccggt tgcaccgcag cagcagtatc
    20401 agcagccgca acaaccagtt ccgccacagc agcaatatca gcagccgcaa caaccggttg
    20461 caccgcagca gcagtatcag cagccgcaac aaccagttcc gccacagcag caatatcagc
    20521 agccgcaaca gccggttgcg ccgcagccgc agtatcagca gccacaacag caggttgcgc
    20581 cgcagccaca atatcagcag ccgcaacaac cggttgcgcc acagccgcaa tatcagcagc
    20641 cgcaacaacc agttgcgccg cagccgcagt atcaacagcc gcaacaaccg gttgcaccgc
    20701 agcagcagga taccctgctt catccgctgt tgatgcgtaa tggcgacagc cgtccgttgc
    20761 ataaaccgac gacgccgctg ccttctctgg atttgctgac accgccgccg agcgaagtgg
    20821 agccggtaga tacctttgcg cttgaacaaa tggctcgcct ggtggaagcg cgtctggctg
    20881 atttccgtat taaagccgat gtcgtcaatt actctccggg gccggttatc actcgctttg
    20941 aacttaacct ggctcctggc gtaaaagcgg cgcgcatttc taacttgtca cgggaccttg
    21001 cccgttcact ttcgacggtg gcggtgcgtg tcgttgaagt tattcctggc aaaccctatg
    21061 taggtctgga gttaccaaat aaaaaacgac aaaccgttta tctgcgcgaa gttttggata
    21121 acgccaaatt ccgcgataat ccgtcgccat taaccgtggt gctgggtaaa gatatcgccg
    21181 gtgagccggt ggttgccgat ctggcgaaaa tgccgcactt gttggttgcg gggactaccg
    21241 gttccggtaa atctgtcggt gtgaacgcga tgatcctgag catgctttat aaagcacagc
    21301 cagaagatgt gcgtttcatc atgatcgacc cgaaaatgct ggagctttcg gtttatgaag
    21361 gcattccgca tctgttaacg gaagtcgtta ctgatatgaa agatgccgcc aacgcgctgc
    21421 gctggtgtgt taacgagatg gagcgtcggt ataaactgat gtctgcgctg ggtgtgcgta
    21481 atctggcggg ttataacgaa aaaattgctg aagccgatcg catgatgcgt ccgattccag
    21541 acccgtactg gaagccgggt gacagtatgg atgcccagca tccggtgctg aaaaaagaac
    21601 catacattgt ggtgttggtt gacgaatttg ccgacctgat gatgacggta ggtaaaaaag
    21661 tggaagagct gatagcacgt ctggcgcaaa aagcccgtgc cgcgggtatc cacctcgtac
    21721 tggcaactca gcgtccatcg gttgatgtta ttactggtct gattaaagcg aatattccga
    21781 cccgtatcgc ctttaccgta tccagtaaga ttgactcacg taccattctt gatcaggctg
    21841 gcgcggaatc actgctgggg atgggggata tgctctactc tgggccgaac tccacgttgc
    21901 cggtacgtgt ccatggtgct tttgttcgcg atcaggaagt tcatgccgtg gtgcaggact
    21961 ggaaagcgcg tggtcgccca cagtatgttg atggcatcac ttccgacagt gaaagcgaag
    22021 gtggcgcggg cggtttcgat ggcgctgaag aactggatcc gttgttcgat caggcggtgc
    22081 agtttgtcac tgaaaaacgc aaagcgtcaa tttctggcgt acagcgtcag ttccgcattg
    22141 gttataaccg tgcagcgcgt attatcgaac agatggaagc gcaggggatt gtcagcgaac
    22201 aggggcacaa cggtaatcgt gaagtgctgg ccccaccgcc gtttgactaa ttaatgcatt
    22261 gccggataag gcgcggtagc gtcgcatccg gcactctatc aactgaaaat tcagtatttt
    22321 cttctttcct caagctgatt attagcctgg aatagagagt agagggaact cccgatcggg
    22381 agtgacgtaa tttgaggaat aatgatgaaa aaaattgcca tcacctgtgc attactctca
    22441 agcttagtag caagcagcgt ttgggctgat gccgcaagcg atctgaaaag ccgcctggat
    22501 aaagtcagca gcttccacgc cagcttcaca caaaaagtga ctgacggtag cggcgcggcg
    22561 gtgcaggaag gtcagggcga tctgtgggtg aaacgtccaa acttattcaa ctggcatatg
    22621 acacaacctg atgaaagcat tctggtttct gacggtaaaa cactgtggtt ctataacccg
    22681 ttcgttgagc aagctacggc aacctggctg aaagatgcca ccggtaatac gccgtttatg
    22741 ctgattgccc gcaaccagtc cagcgactgg cagcagtaca atatcaaaca gaatggcgat
    22801 gactttgtcc tgacgccgaa agccagcaat ggcaatctga agcagttcac cattaacgtg
    22861 ggacgtgatg gcacaatcca tcagtttagc gcggtggagc aggacgatca gcgcagcagt
    22921 tatcaactga aatcccagca aaatggggct gtggatgcag cgaaatttac cttcaccccg
    22981 ccgcaaggcg tcacggtaga tgatcaacgt aagtagaggc acctgagtga gcaatctgtc
    23041 gctcgatttt tcggataata cttttcaacc tctggccgcg cgtatgcggc cagaaaattt
    23101 agcacagtat atcggccagc aacatttgct ggctgcgggg aagccgttgc cgcgcgctat
    23161 cgaagccggg catttacatt ctatgatcct ctgggggcca ccgggtaccg gcaaaacaac
    23221 cctcgctgaa gtgattgccc gctatgcgaa cgctgatgtg gaacgtattt ctgccgtcac
    23281 ctctggcgtg aaagaaattc gcgaggcgat cgagcgcgcc cggcaaaacc gcaatgcagg
    23341 tcgccgcact attctttttg ttgacgaagt tcaccgtttc aacaaaagcc agcaggatgc
    23401 atttctgcca catattgaag acggcaccat cacttttatt ggcgcaacca ctgaaaaccc
    23461 gtcgtttgag cttaattcgg cactgctttc ccgtgcccgt gtctatctgt tgaaatccct
    23521 gagtacagag gatattgagc aagtactaac tcaggcgatg gaagacaaaa cgcgtggcta
    23581 tggtggtcag gatattgttc tgccagatga aacacgacgc gccattgctg aactggtgaa
    23641 tggcgacgcg cgccgggcgt taaatacgct ggaaatgatg gcggatatgg ccgaagtcaa
    23701 tgatagcggt aagcgggtcc tgaagcctga attattgacc gaaatcgccg gtgagcgaag
    23761 cgcccgcttt gataacaaag gcgatcgctt ttacgatctg atttccgcac tgcataagtc
    23821 ggtacgtggt agcgcacccg atgcggcgct gtactggtat gcgcgaatta ttaccgccgg
    23881 tggcgatccg ttatatgtcg cgcgtcgctg tctggcgata gcgtctgaag atgtgggtaa
    23941 tgctgatcca cgagcgatgc aggtggcaat tgcggcctgg gattgcttta ctcgcgttgg
    24001 cccggcggaa ggtgaacgcg ccattgctca ggcgattgtt tacctggcct gcgcgccaaa
    24061 aagcaacgct gtctacactg cgtttaaagc cgcgctggcg gatgctcgcg aacgtccgga
    24121 ttatgacgtg ccggttcatt tgcgtaatgc gccgacgaaa ttaatgaagg aaatgggcta
    24181 cgggcaggaa tatcgttacg ctcatgatga agcaaacgct tatgctgccg gtgaggttta
    24241 cttcccgccg gaaatagcac aaacacgcta ttatttcccg acaaacaggg gccttgaagg
    24301 caagattggc gaaaagctcg cctggctggc tgaacaggat caaaatagcc ccataaaacg
    24361 ctaccgttaa tgttatcgtt gcggtaatgt tgttactgta tccctgtggt cgcaggctgt
    24421 ggccacatct cccatttaat tcgataagca caggataagc atgctcgatc ccaatctgct
    24481 gcgtaatgag ccagacgcag tcgctgaaaa actggcacgc cggggcttta agctggatgt
    24541 agataagctg ggcgctcttg aagagcgtcg taaagtattg caggtcaaaa cggaaaacct
    24601 gcaagcggag cgtaactccc gatcgaaatc cattggccag gcgaaagcgc gcggggaaga
    24661 tatcgagcct ttacgtctgg aagtgaacaa actgggcgaa gagctggatg cagcaaaagc
    24721 cgagctggat gctttacagg ctgaaattcg cgatatcgcg ctaaccatcc ctaacttgcc
    24781 tgcagatgaa gtgccggtag gtaaagacga aaatgacaac gttgaagtca gccgctgggg
    24841 caccccgcgt gagtttgact ttgaagttcg tgaccacgtg acgctgggtg aaatgcactc
    24901 tggcctcgac tttgcagccg cagttaagct gacaggttcg cgctttgtgg tgatgaaagg
    24961 gcagattgct cgcatgcacc gcgcactgtc gcagtttatg ctggatctgc ataccgaaca
    25021 gcatggctac agtgagaact atgttccgta cctggttaac caggacacgc tgtacggtac
    25081 gggtcagctg ccgaaatttg ctggcgatct gttccatact cgtccgctgg aagaagaagc
    25141 agacaccagt aactatgcgc tgatcccaac ggcagaagtt ccgctgacca acctggtacg
    25201 cggtgaaatc attgatgaag atgatctgcc aattaagatg accgcccaca ccccatgctt
    25261 ccgttctgaa gccggttcat atggtcgtga cacccgtggt ctgatccgta tgcaccagtt
    25321 cgacaaagtt gaaatggtgc agatcgtgcg cccggaagac tcaatggcgg cgctggaaga
    25381 gatgactggt catgcagaaa aagtcctgca actgctgggc ctaccgtacc gtaaaatcat
    25441 cctttgtacc ggcgacatgg gctttggcgc ttgcaaaact tacgacctgg aagtatggat
    25501 cccggcacag aacacctacc gcgagatctc ttcctgctcc aacgtttggg atttccaggc
    25561 gcgtcgtatg caggctcgtt gccgcagcaa gtcggacaag aaaacccgtc tggttcatac
    25621 cctgaacggt tctggactgg ctgttggtcg tacgctggtt gcagtaatgg aaaactatca
    25681 gcaggctgat ggtcgtattg aagtaccaga agttctgcgt ccgtatatga acggactgga
    25741 atatattggc taatacccaa tttttctgaa tctaaaaagc gcctgcgggc gctttttttg
    25801 tctccctttg ataccgaaca ataattactc ctcacttaca cgtaatacta ctttcgagtg
    25861 aaaatctacc tatctctttg attttcaaat tattcgatgt atacaagcct atatagcgag
    25921 ctgctataga aataattaca caatacggtt tgttactgga atcaatcgtg agcaagcttg
    25981 agtgagccat tatgaaaacg aaaatccctg atgcggtatt ggctgctgag gtgagtcgcc
    26041 gtggtttggt aaaaacgaca gcgatcggcg gcctggcaat ggccagcagc gcattaacat
    26101 taccttttag tcggattgcg cacgctgtcg atagcgccat tccaacaaaa tcagacgaaa
    26161 aggttatctg gagcgcctgt acagttaact gtggtagtcg ctgcccgcta cgtatgcacg
    26221 tcgtggacgg tgaaatcaaa tatgtcgaaa cggacaatac cggcgatgac aattacgacg
    26281 gcctgcacca ggttcgcgcc tgcctgcgtg ggcgttccat gcgtcgccgt gtctacaatc
    26341 cggaccgcct gaaatatccg atgaaacgag tcggggcgcg cggtgaaggc aaattcgagc
    26401 gcattagctg ggaagaagcc tacgacatca tcgcgaccaa tatgcagcgc ctgatcaaag
    26461 agtacggcaa cgagtctatc tatctgaact atggcaccgg tacgctgggc ggcaccatga
    26521 cccgctcctg gccgccggga aataccctgg tcgcgcggct gatgaactgc tgcggcggct
    26581 atctgaacca ttacggcgac tactcctccg cgcaaattgc ggaaggtttg aactatacct
    26641 acggcggctg ggcagatggt aacagcccgt cggatatcga aaacagtaag ctggtagtgc
    26701 tgtttggtaa taaccctggc gaaacgcgaa tgagtggcgg tggggtgact tactatcttg
    26761 aacaggcacg ccagaaatct aatgcccgca tgatcatcat tgatccgcgc tataccgaca
    26821 ccggtgccgg gcgcgaagat gagtggatcc ctattcgtcc gggaacagat gccgcactgg
    26881 ttaacggtct ggcgtacgtc atgatcactg aaaacctggt ggatcaggca ttcctcgata
    26941 aatattgcgt tggctacgat gagaaaaccc tgccagccag tgcgccgaaa aatggccact
    27001 ataaagctta tattctgggt gaagggccag atggcgtggc taaaacaccg gaatgggcct
    27061 cacaaatcac cggtgttccg gcagacaaaa tcatcaaact ggctcgtgaa atcggcagta
    27121 ccaaaccggc gtttatcagc cagggatggg gcccgcagcg tcacgctaac ggtgaaatcg
    27181 caacccgtgc tatctcgatg ctggcgattc tgaccggtaa cgttggtatt aacggaggca
    27241 acagcggcgc gcgtgaaggt tcatacagct taccgtttgt ccgtatgccg accttggaaa
    27301 acccgatcca gaccagcatt tcgatgttta tgtggaccga tgccattgaa cgtggcccgg
    27361 aaatgacggc gctgcgtgat ggtgtacgcg ggaaagataa gctggatgtg ccgatcaaaa
    27421 tgatctggaa ctatgccggt aactgcctga ttaaccagca ttctgaaatc aaccgtaccc
    27481 atgaaatcct tcaggatgat aagaagtgcg agctgattgt ggttatcgac tgccacatga
    27541 cctcatcggc gaaatatgct gacatcctgc tgcctgactg caccgcttcc gaacagatgg
    27601 actttgcact ggatgcatcc tgcgggaata tgtcttacgt gattttcaac gatcaggtga
    27661 ttaaaccgcg ctttgaatgt aagaccatct atgaaatgac cagcgaactg gcaaaacgtc
    27721 ttggcgttga gcaacagttt actgaaggcc gtacccagga agagtggatg cggcatctgt
    27781 atgcccagtc gcgggaagcg attcctgaac tgccaacgtt tgaagagttc cgcaagcagg
    27841 ggatctttaa aaagcgcgac ccacaagggc atcacgttgc ttataaagcc ttccgtgaag
    27901 atccgcaggc aaacccactg actacgccat cgggcaaaat tgagatttat tcgcaggcgc
    27961 tggctgacat tgccgctacc tgggaattgc cagaaggcga tgtgatcgat ccactgccga
    28021 tctacacgcc gggctttgaa agttatcagg atccgctgaa caaacagtat ccgctgcagc
    28081 ttacgggttt ccactataaa tctcgcgttc actcaactta cggcaacgtt gatgtgctga
    28141 aagcagcttg ccgtcaggaa atgtggatca acccgcttga tgcgcaaaaa cgcggtatca
    28201 acaacggcga taaagtcagg atctttaacg atcgtggtga ggttcatatt gaggcgaaag
    28261 tgacgccacg aatgatgccg ggtgtggtcg cactgggtga aggtgcctgg tatgacccgg
    28321 atacaaaacg tgtcgataag ggcggttgta tcaacgtact gaccactcaa cgtccgtctc
    28381 ctctcgctaa ggggaatccg tcacatacaa accttgttca ggttgaaaag gtgtaaggag
    28441 taaccgatga caacccagta tggatttttt attgattcca gccgttgcac cggttgcaaa
    28501 acctgcgagc tggcctgtaa agactacaaa gatttgacgc cagaagtcag cttccgccgc
    28561 atttatgaat atgctggcgg cgactggcag gaagataacg gtgtctggca ccagaacgtg
    28621 tttgcctact atctgtcgat ttcatgtaac cactgcgaag atccggcttg tactaaagtc
    28681 tgcccgagcg gtgcgatgca taaacgtgaa gatggttttg ttgtggtcga tgaagatgtg
    28741 tgcattggct gccgctactg ccatatggct tgcccgtatg gcgcaccgca atataacgaa
    28801 acgaaaggcc atatgaccaa atgcgatggt tgttatgacc gtgttgcgga gggtaaaaag
    28861 ccgatctgtg ttgaatcttg tccgctgcgg gcgctggatt tcggccctat cgacgagctg
    28921 cgtaaaaaac atggcgatct ggcggccgtt gcgccgttgc cgcgagctca ctttaccaaa
    28981 ccgaatattg tgatcaaacc caatgccaat agccgcccga ccggggatac cactggctat
    29041 ctggcaaacc cgaaggaggt gtgagatggg aagtggatgg catgaatggc cgctgatgat
    29101 cttcacggtc ttcgggcaat gtgtagcagg tggttttatc gttctggctt tggcgctgct
    29161 caaaggcgac ctgcgagcag aagcccagca gcgtgttatc gcctgcatgt ttggtttatg
    29221 ggtgctgatg ggcattggct ttatcgcctc tatgctccat cttggttcac caatgcgcgc
    29281 ttttaactcg ctcaaccggg taggggcttc agcactcagt aacgaaatcg ccagcggttc
    29341 gatctttttt gccgtaggcg gcatcggctg gttgctggca atgctgaaaa agctgtcacc
    29401 ggcattgcgt acgctgtggc tgatagtgac gatggttctt ggcgtcatct ttgtctggat
    29461 gatggtgcgt gtgtataaca gcattgatac cgttccgacc tggtacagca tctggacgcc
    29521 gatgggcttc ttcctgacga tgtttatggg cggcccgtta ctgggttacc tgttgttgag
    29581 tctggctggc gtcgatggct gggcgatgcg tctgctgcca gccatttctg tactggcact
    29641 ggtggtgagt ggcgtgatgt cagtgatgca gggcacagag ctggcaacta ttcatagttc
    29701 tgtgcagcag gccgcagcgc tggtgccgga ctatggtgcg ctgatgtcct ggcggatcgt
    29761 gcttttggcc gttgccctgt gcttgtggat tgcaccacag ctaaaaggtt atcaacctgc
    29821 ggttccgcta ctatccgtct cattcattct gcttctggca ggggaattaa tcggtcgcgg
    29881 cgtattctat ggtttgcata tgaccgtggg gatggccgtc gcaagctaat cagtaacaac
    29941 cggggtttcg gccccggttc tcttttattt ctgcttcgtt aacgtgtcat aactggtcat
    30001 caaattacga taatcaggaa tatggttaga gaacaacgtc gccagtcctt caatatcatt
    30061 acgccagtca cggtgcagct cgcacgccac gccgaaccat gtcatcaatt gcgcacctgc
    30121 ttgcgacatg cgatcccatg ccgaatgccg ggtaatttca ttaaaggtcc ctgacgcgtc
    30181 agtcacaaca aagacatcaa acccttcttc aatggctgaa agcgccggga atgccacgca
    30241 aacttcggtt accacaccgg caataattaa ctgtttttta cctgtcgctt tgactgcttt
    30301 tacaaaatct tcgttatccc aggcgttaat atttcccggg cgagcaatgt aaggtgcatc
    30361 ggggaattgt gctttcagtt ctggaactaa tggaccgtta ggaccggttt caaaactggt
    30421 ggtaagaata gtaggtaagt tgaaatactt agccaggtca cccagcgcca gcacgttatt
    30481 tttaaactta tcgggttcga tatcccgtac aagggaaagt aaaccagcct gatgatcaac
    30541 aagcaaaacg gcagcatcat ttttatcaag acgaacatac ggtttggtca tcctcttctc
    30601 ctttcgagag tcagtggtac gtctgaaatc ggtcagacgt gatgcattgc tctgaaagca
    30661 tagacgggaa atatgagttt gctgtgacca tgaaattttt cgactgaacg aagcgtatga
    30721 aatttgtgtt agatcaataa aaacaatcag atgagattaa tcatctcttc agcattagcg
    30781 ttatgaatga gtaatataaa tcgataatac cgccgctgcg atatgcgcgt attttcaccc
    30841 attgacaatg tttttggcgg tggcatgatg cgcatgaaat ttgaacttcc tcacggtttt
    30901 aattcatgtc cacgtatacc cggcctgtca tgcttttgct gtctggcctg cttttgttga
    30961 ctctggcgat cgcggtgtta aatacactcg tgccgctttg gctcgcccag gaacacatgt
    31021 ccacatggca ggtaggcgtt gtcagctcat cctattttac cggcaacctt gtcggtacat
    31081 tgctgacagg gtatgtcatt aagcgcattg gctttaaccg cagctattat ctggcctcct
    31141 tcatttttgc cgctggctgt gccggccttg gcctgatgat tggattctgg agctggttgg
    31201 cttggcgttt tgtcgcgggc gtcggctgtg ccatgatttg ggtggttgtt gagagcgcgc
    31261 tgatgtgcag tgggacgtca cgtaaccgtg ggcgtttgct tgctgcgtat atgatggttt
    31321 attacgtggg aacgttttta ggccagttac tggtcagcaa agtttcaacc gagctgatgt
    31381 ccgtattgcc gtgggttaca ggtttgacgt tggcagggat cttaccgctg ttgtttacgc
    31441 gtgtgctgaa tcagcaggct gaaaaccatg attcgacgtc aattacgtca atgctaaaac
    31501 tccgtcaggc gcggcttggc gtgaatggct gcattatctc aggaatcgtt ctgggatctc
    31561 tatatggcct gatgccgctg tacctcaatc acaaaggggt gagcaatgcc agcattggtt
    31621 tctggatggc ggtactggtc agtgcgggta tccttggaca atggccgatt ggacgtctgg
    31681 cggataagtt tggtcgactg ctggtgttgc gtgttcaggt ctttgtcgtc attctcggca
    31741 gtatcgcgat gcttagccag gcggcgatgg ccccagcgtt attcatcctc ggtgccgctg
    31801 gctttacgct atatccggtg gcgatggcat gggcttgcga gaaagttgaa catcatcaac
    31861 tggtggcgat gaaccaggcc ttactgttga gttatactgt gggaagtctg cttggcccgt
    31921 catttaccgc tatgctaatg cagaatttct ccgataattt attgtttatc atgatcgcca
    31981 gcgtatcgtt tatctatttg ctgatgctgc tgcgcaacgc cggtcatacg ccgaaacccg
    32041 ttgctcacgt gtaaatgaat tcaagcagag tgtgaactta ctgtttcaca ctctgctttt
    32101 ttgtttcttc tatctgactt gctttattcc aaattttatt cgtttaaaaa taaaatgtgc
    32161 agcaggttat aattttgcat ttcgctattt ccgcacttct tatttgccgc gcataatccc
    32221 tcgttttaca gatgcccctt taattttggc gaaggatttg tctatggctg ggaatgttca
    32281 ggaaaaacag ttgcgatggt acaacattgc gctgatgtct tttatcactg tctggggttt
    32341 tggcaacgtt gttaataact atgccaacca ggggctggtg gttgtttttt catgggtgtt
    32401 tatctttgca ctctatttca caccttatgc gctaattgtt ggtcagttag gctcgacctt
    32461 caaagatggg aagggcgggg tcagtacctg gattaaacac acgatgggac ccggactggc
    32521 ttatctcgcc gcgtggacct actgggtggt gcatattccc tatctggcac aaaaacccca
    32581 ggcaattctg attgcgctcg gttgggcgat gaaaggcgac ggttcgctaa tcaaagaata
    32641 ttcagtcgta gcgttacagg ggttaacgct ggtgctgttt atcttcttta tgtgggttgc
    32701 ttcacgcggt atgaaatcgc tgaaaatcgt cggttctgtg gcagggattg cgatgtttgt
    32761 tatgtcgctc ctgtatgtgg cgatggcggt aaccgcgcct gcgattactg aagtgcatat
    32821 tgcgaccaca aacattacct gggaaacgtt cattcctcat atcgacttta cctacattac
    32881 cactatttca atgctggttt tcgcggttgg cggagcagag aagatttctc cttacgttaa
    32941 tcaaacgcgc aacccaggaa aagaatttcc aaaagggatg ctatgcctgg cggtgatggt
    33001 tgcggtttgt gccattctgg gctcactggc gatggggatg atgtttgact cgcgtaatat
    33061 cccggatgac ttaatgacta acggtcaata ttacgccttt cagaagctgg gcgagtatta
    33121 caacatgggt aatactttaa tggtgattta cgccattgcg aataccctgg gacaagtagc
    33181 tgcgctggta ttctcgattg atgccccgct taaagtgcta ttaggtgatg ctgacagcaa
    33241 atatattcca gccagtttat gtcgtaccaa cgcttctggt acgcccgtta atggctattt
    33301 tctgaccctg gtgctggtgg caattctgat tatgctgccg actctcggca tcggtgatat
    33361 gaacaatctc tataaatggc tgttgaatct taactcggta gtgatgccgc tgcgttattt
    33421 atgggtattt gttgcattta ttgcagtcgt tcgcctggcg cagaaatata aaccagaata
    33481 tgtctttatt cgtaataagc ctctggcaat gaccgtcggg atttggtgtt ttgcctttac
    33541 cgcctttgcc tgtttgacgg ggatcttccc gaaaatggaa gccttcactg cagagtggac
    33601 cttccagttg gcgctgaatg ttgcaacgcc gtttgtgctg gtaggattag gactgatttt
    33661 cccgctgctg gcgcgtaaag cgaatagtaa ataattattg tggtcggtga cgctgactct
    33721 ggcagatctg acccgttttt acataatcga gaaatgcgcg caagccgcag gacatatact
    33781 ggcggtttgg ataatagatc tggaagcctg gacgctctgt gctccagtct cccagtacac
    33841 attctaaacg accagtatca aggtactcct tgatctgttc atagagcaga tacccgatac
    33901 cagcacccat caaaacggcc tccagttcag catcaacatc atccagaatg atatttcctg
    33961 cgacagcaat ttccagctcc tttgcaaatt gccagtggaa aggtttgccg ctgggataac
    34021 gaaaaacaac acattgatga ttaagcagat catgaggatg gcggggtttg ccatatcttg
    34081 caaagtactc tggcgttgct gctacacata atttcactgg tgggccgatc gccacgctga
    34141 tcatatcttt ttcgacgatg ccactaagtc gaacgccagc gtcaaagccc tgttggacga
    34201 tatcgacaag agaatcgtca gttgtgagct cgacgtgaat atcaggatat tcacgtgtga
    34261 aaccaaccag taaaggcatt aaaaatatac gtgcagctac ccgggcggca ttgattttga
    34321 gcgttcctgt cggtgtcaga cgaaaatcat tcatctcatc taacatgatc tgaatttcgt
    34381 cgaaagctgg gcgcaatcgt tcatagagat tagaacccgc ttccgttaac gatacgcttc
    34441 gggttgtccg attgaataag cgaattttaa gacgttgttc cagtgtttta atactatggc
    34501 taatggcgga cgaggataag cctaactcat cgcccgctgc acgaaagctt tgattacggg
    34561 cgacggcaaa gaaagtggca aagtcagaca tattcatccg cattagtgaa aatccttcat
    34621 taactcatcc tgaatcatca cgtttacagg attatgccgc ctgcgtaaag tgcgctccag
    34681 aacttaacgt ggaggtaaaa ttatgcagtc tgaacgtatt tatttggtat gggcccatcc
    34741 tcgtcatgat tcattgaccg caaatattgc tgatgcgatc catcagcggg caatggagcg
    34801 gaaaatacag gtgacggaac tcgatttata tcggcgtaat ttcaacccag tgatgacgtc
    34861 ggaagatgaa ccagactgga agaatatgga taaacgttat tctccagagg ttcatcagct
    34921 ttattcagag ctgcttgaac atgacacgtt agtggtggtt tttcctctct ggtggtacag
    34981 cttcccggca atgctaaaag gatatattga cagagtatgg aataatgggc tggcttatgg
    35041 agatgggcac aaattaccat tcaataaagt tcgttgggtg gcgctggttg gaggagacaa
    35101 agaatcattt gtccagatgg gctgggaaaa aaatataagc gattatttga aaaatatgtg
    35161 cagttatctt ggtattgaag atgccgatgt cactttcttg tgtaatacag tggtattcga
    35221 tgggcaagaa cttcatgcga gctattatca gtcgttatta tctcaggtac gggatatggt
    35281 agatgcacta taaaatgtgt taaaaacgct gtagcagaat gaagcgcgga ataaaaaagc
    35341 ggcaactcaa taaagttgcc gctttacggg gaaattagaa cattacctta tgaccgtact
    35401 gctcaagaat gcctttcacg cgttccatgg tctctttctt aggtggttta acaccgtcga
    35461 gtttgtactc ttcacccatt gccacccatt tgtgtttgcc cagctcgtgg taggggagaa
    35521 gctcgatttt ctcaacgttg cccatatcac gggtaaattc accgaggcga tgcgctgaat
    35581 cgtcatcgtc agaccagcct gggacaacaa cgtagcggat ccacaccttc acatttttgt
    35641 tcgccagata tttggcgaac tccagcgtgc ggtgattgga aactccaacc agattttggt
    35701 ggatctcgtc gttcatctgt ttgagatcga gcattaccag gtcggttact tccagcagtt
    35761 catcaatcac cggatcgtaa cgacgaacaa aaccgttggt gtccagacag gtatgaatgc
    35821 cttctttttt gcaggcgcgg aaccagtcac gaacaaactc agcttgtagg attgcctcac
    35881 cgccggatgc ggtaacgccg ccgccggaag cgttcataaa gtggcgatag gtcaccacct
    35941 ctttcattaa atcttcaacg gtaacttctt taccgccatg cgtatcccag gtgtcgcggt
    36001 tatgacaata caggcagcgc atcaggcagc cctggaaaaa ggtgataaag cgaatacctg
    36061 ggccgtctac ggttccacag gattcaaagg agtgaatgcg accaataact gacattgcgg
    36121 tgtttctcca gatgtggccc atctgaggcc gtgttggtgc gcagctcgaa ggctacgtcg
    36181 agtctgtttt ggcagtcacc ttagagtata gatagctgac aaaaaaggct ctcgtgctaa
    36241 aaaaggcccc actttcgtgg agcctttatt gtacgctttt tactgtacga tttcagtcaa
    36301 atctaattac atagattgag tgaaggtacg agtaataacg tcctgctgct gttctttagt
    36361 cagcgagttg aaacgtactg cgtagccaga tacacggatg gtcagctgcg gatatttttc
    36421 cgggttttcc atcgcgtcga gcagcatttc acggttcatc acgttaacgt tcaggtgctg
    36481 accaccttcg atggatgctt cgtggtggaa gtaaccatcc atcagaccag ccaggttggt
    36541 cttacgaact tcgtcgtctt tacccagtgc gttcggaacg atagagaagg tgtaggagat
    36601 accatcttta gcgtaagcaa acggcagttt agcaacggaa gtcagagacg ctacagcacc
    36661 tttctggtca cgaccgtgca tcgggttagc acccggtccg aacggcgcgc cagcacgacg
    36721 accgtctggg gtgttaccag ttttcttacc atacacaacg ttagaagtga tggtcagaac
    36781 agactgagtc gggatagcgt cacggtaggt gtgcagtttc tgaattttct tcatgaaacg
    36841 ttctaccagg tcaacagcca ggtcatctac acgcggatca ttgttaccaa actgcgggta
    36901 ttcgccttcg atttcgaagt cgatagcaag accgtcttcg tcacgaatcg gtttaacttt
    36961 cgcatatttg attgcagaca gggagtcagc agcaacggac agaccagcga taccacacgc
    37021 catggtgcgg ataacgtcac ggtcgtgcag cgccatcaga gaggcttcgt agctgtactt
    37081 gtcgtgcatg tagtggatga tgttcagtgc agtgatgtac tgtttagcca gccagtccat
    37141 gaagtgatcc atgcgctcca tcacttcatc atagttcagg acatcgcctt tgatcggttc
    37201 agacttcgga ccaacctgca ttttcagttt ttcgtcaacg ccgccgttga ttgcgtacag
    37261 catggttttc gccaggtttg cacgcgcacc gaagaactgc atttgtttac caacgatcat
    37321 cgggcttacg cagcaagcaa tagcgtagtc atcgttgttg aagtccggac gcatcaggtc
    37381 atcgttctca tactgcagag aagaggtgtc gatggacact ttagcggcga atttcttgaa
    37441 gttcagcggc agtttttcag accacagaat ggtcatgttc ggttccggag acggacccat
    37501 ggtgtacagg gtgttcagga aacggaagct gtttttggta accagggtac gaccgtcgag
    37561 gcccatacca ccgatagatt cggttgccca gatcgggtcg ccagagaaca gttcatcgta
    37621 ctccggagta cgcaggaagc gaaccatacg cagtttcatg accaggtggt caaccatttc
    37681 ctgcgcttct tgttcggtga tcttgccagc tttcaggtca cgttcgatgt acacatccag
    37741 gaaggtggag gtacgaccga aggacattgc agcaccgttc tgagacttaa cagcagccag
    37801 gtagccgaag taagtccact ggatagcttc ctgagcgttg gtagccggac cagagatgtc
    37861 gtagccgtat ttcgcagcca tttctttcat ctgacccaga gcgcggtgct gttcagcgat
    37921 ttcttcgcgc agacggatag tctgttccag gtttacgccg ttttccagat cagcctgcag
    37981 agaagtgaac tgtgccagtt tgtctttcat caggtagtcg ataccgtaca gcgcaacgcg
    38041 acggtagtca ccgatgatac ggccacggcc atatgcatct ggcagaccgg tcagaacacc
    38101 agatttacgg caacgcagga tgtccggagt gtaaacgtcg aacacgccct ggttgtgagt
    38161 tttacggtat tcagtgaaga tttttttgat catcggatcc agttcgcggt tgtacgcttt
    38221 gcaggaacct tcgatcattt tgataccacc gaacgggata agagcacgtt tcagcggagc
    38281 ttcagtctgc agaccaacga ttttctcaag ctgcttgttg atgtagccag cgtcgtgaga
    38341 ggtgatggtg gaagcaacag cggtgtcaaa gtcaactggc gcgtgagtgc ggttttccag
    38401 tttaacgcct tccattactt tgtcccacag ggtggtggtc gcttcagtag cgccagccag
    38461 gaaggactcg tcaccctcgt acggagtgta gtttttctga atgaagtcac ggacgtttac
    38521 ttcattctgc cagtcacctt tggtaaaacc ttcccaggct gtggctaact tttcattaag
    38581 ctcggacatg taacacctac cttcttaagt ggatttttta tttactgcgt acttcgacaa
    38641 ccattaatgg tggtcgtttt cacgcaggta aatgacccag tatgtcaacc caaccaacaa
    38701 accaccaccg ataatgttgc cgatcgtaac cggaatcagg ttatcagtga tgaaattcat
    38761 cacggtcagg tgagaaaaat tttccggtgc agaaccgact gcggtccaaa attccgggga
    38821 tgcgaagtcg cggattacaa tacccatcgg gatcataaac atgtttgcga tactgtgctc
    38881 aaaaccgctg gcaacaaaca tcgcgaccgg cagcaccata atgaacgctt tgtccatcag
    38941 gctgcggcca gaataactca tccatactgc cagacatacc atcaggtttg ccaggatacc
    39001 aagacagacg gcctcaataa aagtatggtg cactttgtgg tcggcggttt gtaggacgtt
    39061 tagtccccat tgaccatttg cggtcatata ctcgccggaa agccacatta aaagtacaaa
    39121 cagcagtgcg ccgaccaggt tgccaaaata gacatttagc cagtttttcg ccaactgacc
    39181 ccaggtgatg cgcccactcg ccttagcaac aacaatcaac actgtggaag taaagagatc
    39241 ggctccgcag acaacacaaa gaatcagccc cagagagaag caaatgccgc caaccagttt
    39301 tgccatgccg aagggcattg tgcctgtgcc agtggttgct gtgatataga agacgaatgc
    39361 gattgagatg aaaacaccgg cggtaatcgc cagatagaaa gtcttaagcg gatgtttcgt
    39421 tgctttatag acacccgcct cttcggccac tttggccatt gcagcaggaa gtaaaagatc
    39481 aaaagggttg tcagctttca cactaactct ctctttatta agtcggcgac gagatactaa
    39541 caaagcatta tagatgagaa attgatatag atcatatctc gcctggctta taggcccgta
    39601 actcgcatgg ttttt
//
LOCUS       DAPGWB010000026        37686 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.026, whole genome shotgun sequence.
ACCESSION   DAPGWB010000026 DAPGWB010000000
VERSION     DAPGWB010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 37686)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37686)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37686
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.026"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(26..358)
                     /gene="emrE"
                     /locus_tag="RHX79_001321"
     CDS             complement(26..358)
                     /gene="emrE"
                     /locus_tag="RHX79_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMR family multidrug efflux protein EmrE"
                     /protein_id="HDV2196515.1"
                     /translation="MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASF
                     WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN
                     LLSRSTPH"
     gene            complement(426..728)
                     /locus_tag="RHX79_001322"
     CDS             complement(426..728)
                     /locus_tag="RHX79_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein ren"
                     /protein_id="HDV2196516.1"
                     /translation="MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARPG
                     ILVVDGKVWRTVYYRFATREEREGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ"
     gene            complement(725..1426)
                     /locus_tag="RHX79_001323"
     CDS             complement(725..1426)
                     /locus_tag="RHX79_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Replication protein P"
                     /protein_id="HDV2196517.1"
                     /translation="MKNIAAQMINFDREQMRRIANNMPEQYDEKPQVQQVAQIINGVF
                     SQLLATFPASLANRDQNELNEIRRQWVLAFRENGITTMEQVNAGMRVARRQNRPFLPS
                     PGQFVAWCREEASVIAGLPNVSELVDMVYEYCRKRGLYPDAESYPWKSNAHYWLVTNL
                     YQNMRANALTDAELRRKAADELVHMTARINRGEAIPEPVKQLPVMGGRPLNRAQALAK
                     IAEIKAKFGLKGASV"
     gene            complement(1423..2442)
                     /locus_tag="RHX79_001324"
     CDS             complement(1423..2442)
                     /locus_tag="RHX79_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000147908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDV2196518.1"
                     /translation="MTGSEMAKAGLLEQNRLSGANRNTLIAGGIMANTAEIFNFPVPD
                     AAQKEPRVADLDDGYTRIANELLEAVMLAGLTQHQLLVFLAVMRKTYGFNKKLDWVSN
                     EQLSELTGILPHKCSAAKSVLVKRGILIQSGRNIGINNVVSEWSTLPESGKKNKVYLK
                     EVNLPESGKKSLPKSGKGVYPNQVNTKDKLTKDNIKPFSSENSGESSDQPENDLPVVK
                     PDAAIQSGSKWGTAEDLTAAEWMFDMVKTIAPSARKPNFAGWANDIRLMRERDGRNHR
                     DMCVLFRWACQDNFWSGNVLSPAKLRDKWTQLEINRNKQQAGVTASKPKLDLTNTDWI
                     YGVDL"
     gene            complement(2439..2978)
                     /locus_tag="RHX79_001325"
     CDS             complement(2439..2978)
                     /locus_tag="RHX79_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001182892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin YdaT domain-containing protein"
                     /protein_id="HDV2196519.1"
                     /translation="MQPLTYQQTSGFSPTAVINRSQTKQVPGHEKIRDAVRAWSAEDN
                     QDVVATLIVNEYREQGGGTIDFPDDVSRARQKLFRFLDNKFDSEKYRNNVRELTPAIL
                     AVLPLEYRGYLVEQDSFMARLAEMEKELSEAKQAVILNAPRHQKLKEISEGIVSMFRV
                     DPDLAGPLMAMVTTMLGAI"
     gene            complement(3048..3278)
                     /locus_tag="RHX79_001326"
     CDS             complement(3048..3278)
                     /locus_tag="RHX79_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001067458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2196520.1"
                     /translation="MNPAIKTAINIVGSQKKLGAACEVSQQAVYKWLHNKAKVSPEHV
                     GSIVTATGGVVKAYQIRPDLPKLFPHTEKNAA"
     gene            3383..4072
                     /locus_tag="RHX79_001327"
     CDS             3383..4072
                     /locus_tag="RHX79_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000858971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2196521.1"
                     /translation="MKTTLSERLKEARLARGLTQKALGDLVGVSQAAIQKIETGKANQ
                     TTKIVEIANALGVRAEWLSSGVGNMSDSTVQPIQSTVSHSKYFKIDVLDIEVSAGPGV
                     INREFVEVLRSVEYSFDDARHMFDGRKAENIRIINVRGDSMSGTIEPGDLLFVDITVK
                     SFDGDGIYAFLYDDTAHVKRLQMMKDKLLVISDNKSYSPWDPIEKDEMNRVFIFGKVI
                     GSMPQTYRKHG"
     gene            4668..4874
                     /locus_tag="RHX79_001328"
     CDS             4668..4874
                     /locus_tag="RHX79_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001524508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibitor protein"
                     /protein_id="HDV2196522.1"
                     /translation="MVHQHYGTQTVNRGAVMPGMLVKHKDGTWTASANLRGRLYLHRG
                     IERTYTRDLLVEVFLDGRGNGLNH"
     gene            4951..5247
                     /locus_tag="RHX79_001329"
     CDS             4951..5247
                     /locus_tag="RHX79_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309203.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor protein Gam"
                     /protein_id="HDV2196523.1"
                     /translation="MNAYYIQDRLEAQSWARHYQQIAREEKEAELADDMEKGLPQHLF
                     ESLCIDHLQRHGASKKAITRAFDDDVEFQERMAEHIRYMVETIAHHQVDIDSEV"
     gene            5253..6038
                     /gene="bet"
                     /locus_tag="RHX79_001330"
     CDS             5253..6038
                     /gene="bet"
                     /locus_tag="RHX79_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HDV2196524.1"
                     /translation="MSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQF
                     IALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVDGWSRIINENQQFDGMDFEQDNE
                     SCTCRIYRKDRNHPICVTEWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCA
                     RLAFGFAGIYDKDEAERIVENTAYTAERQPERDITPVNDETMQEINTLLIALDKTWDD
                     DLLPLCSQIFRRDIRASSELTQAEAVKALGFLKQKASEQKVAA"
     gene            6035..6715
                     /locus_tag="RHX79_001331"
     CDS             6035..6715
                     /locus_tag="RHX79_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HDV2196525.1"
                     /translation="MTPDIILQRTGIDVRAVEQGDDAWNKLRLGVITASEVRNVIAKP
                     RSGKKWPDMKMSYFHTLLAEICTGVAPEVNAKALAWGKQYENDARALFEFTSGVNVTE
                     SPIIYRDESMRTACSPDGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQY
                     SMWVTRKDAWYFANYDPRMKREGLHYAVVERDEKYMASFDEMVPEFIEKMDEALAEIG
                     FVFGEQWR"
     gene            6712..6870
                     /locus_tag="RHX79_001332"
     CDS             6712..6870
                     /locus_tag="RHX79_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1317 family protein"
                     /protein_id="HDV2196526.1"
                     /translation="MTHPHDNIRVGAITFVYSITKRGWVFPGLSVIRNPLKAQRLAEK
                     INNKQEDI"
     gene            6867..7931
                     /locus_tag="RHX79_001333"
     CDS             6867..7931
                     /locus_tag="RHX79_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000084449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DGQHR domain-containing protein"
                     /protein_id="HDV2196527.1"
                     /translation="MSQVGNHSFEFPASQGVQGGTVTLFLTIPGRSLARFLASDNYGH
                     TLARSQREINPNRVRKFLNYLTNADSRNEPFIIPPLVGNCDSNIEFVPFGNTNVGIAR
                     IPLDAEIKLFDGQHRAAGIEIFCRSSPSTLMVPMMLTMNLPLKTRQQFFSDINNNVSK
                     PSATINMAYNGRDDIAQGMISFLTQHTVFADITDFEHNVVPLKSNMWVSFKALTDATS
                     KFARNGNQQLEMGYIESVWEAWITLTQIDSIRHGVHHATYKRDYIQFHGVMINAFGFA
                     VQQMMVNHSIAEITSMIEKLCATTSSAEREDFFLMDNWAGICTKASQEKLSVIANVAA
                     QKAAANRLIQAFTKGSLETT"
     gene            8085..8303
                     /locus_tag="RHX79_001334"
     CDS             8085..8303
                     /locus_tag="RHX79_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HDV2196528.1"
                     /translation="MADIIDSASEIEELQRNTAIKMRRLNHQAISATHCCECGDPIDE
                     RRRLAVQGCRTCASCQEEIELKNKQWGL"
     gene            8351..8590
                     /locus_tag="RHX79_001335"
     CDS             8351..8590
                     /locus_tag="RHX79_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016248605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HDV2196529.1"
                     /translation="MFRIIFPNTWYVDHHGTPCKILRSTHNKVHYIRKGRTCIASMFR
                     FNHDFEPVNKADADRIAEEIETAEHIKKLRAIRRK"
     gene            8730..8966
                     /locus_tag="RHX79_001336"
     CDS             8730..8966
                     /locus_tag="RHX79_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excisionase"
                     /protein_id="HDV2196530.1"
                     /translation="MSRLITLQDWAKEEFGDLAPSERVLKKYAQGKMMAPPAIKVGRY
                     WMIDRNSRFVGTLAEPQLPINANPKLQRIIADGC"
     gene            8956..10098
                     /locus_tag="RHX79_001337"
     CDS             8956..10098
                     /locus_tag="RHX79_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase Arm DNA-binding
                     domain-containing protein"
                     /protein_id="HDV2196531.1"
                     /translation="MAARPRSHKISIPNLYCKLDKRTGKVYWQYKHPLSGRFHSLGTD
                     ENEAKQVATEANTIIAEQRTRQILSVNERLERMKGRRSDITVTEWLDKYISIQEDRLQ
                     HNELRPNSYRQKGKPIRLFREHCGMQHLKDITALDIAEIIDAVKAEGHNRMAQVVRMV
                     LIDVFKEAQHAGHVPPGFNPAQATKQPRNRVNRQRLSLLEWQAIFESVSRRQPYLKCG
                     MLLALVTGQRLGDICNLKFSDIWDDMLHITQEKTGSKLAIPLNLKCDALNITLREVIS
                     QCRDAVVSKYLVHYRHTTSQANRGDQVSANTLTTAFKKAREKCGIKWEQGTAPTFHEQ
                     RSLSERLYREQGLDTQKLLGHKSRKMTDRYNDDRGKDWIIVDIKTA"
     gene            complement(10212..11462)
                     /gene="icd"
                     /locus_tag="RHX79_001338"
     CDS             complement(10212..11462)
                     /gene="icd"
                     /locus_tag="RHX79_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000444467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDV2196532.1"
                     /translation="MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPA
                     MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGP
                     LTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY
                     AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI
                     ANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIV
                     IKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL
                     FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYD
                     FERLMEGAKLLKCSEFGDAIIKNM"
     gene            11634..12287
                     /gene="rluE"
                     /locus_tag="RHX79_001339"
     CDS             11634..12287
                     /gene="rluE"
                     /locus_tag="RHX79_001339"
                     /EC_number="5.4.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2457) synthase RluE"
                     /protein_id="HDV2196533.1"
                     /translation="MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILF
                     NKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPG
                     KRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRER
                     KSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD"
     gene            12297..12758
                     /gene="nudJ"
                     /locus_tag="RHX79_001340"
     CDS             12297..12758
                     /gene="nudJ"
                     /locus_tag="RHX79_001340"
                     /EC_number="3.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase NudJ"
                     /protein_id="HDV2196534.1"
                     /translation="MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETL
                     VEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDID
                     CCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI"
     gene            12812..13918
                     /gene="mnmA"
                     /locus_tag="RHX79_001341"
     CDS             12812..13918
                     /gene="mnmA"
                     /locus_tag="RHX79_001341"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDV2196535.1"
                     /translation="MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD
                     GEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILC
                     NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH
                     EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP
                     GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG
                     HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD
                     EPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV"
     gene            13954..14595
                     /gene="hflD"
                     /locus_tag="RHX79_001342"
     CDS             13954..14595
                     /gene="hflD"
                     /locus_tag="RHX79_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HDV2196536.1"
                     /translation="MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSII
                     DMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSA
                     KGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQS
                     PQVQAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL"
     gene            14599..15969
                     /gene="purB"
                     /locus_tag="RHX79_001343"
     CDS             14599..15969
                     /gene="purB"
                     /locus_tag="RHX79_001343"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002950897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDV2196537.1"
                     /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL
                     QKLAAHAAIKEVPAFAADAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKE
                     KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQ
                     YRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHI
                     AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW
                     GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQ
                     RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAIT
                     MVDELK"
     gene            16137..16808
                     /gene="phoP"
                     /locus_tag="RHX79_001344"
     CDS             16137..16808
                     /gene="phoP"
                     /locus_tag="RHX79_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator PhoP"
                     /protein_id="HDV2196538.1"
                     /translation="MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHL
                     PDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKP
                     FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMET
                     LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGY
                     LFELR"
     gene            16808..18268
                     /gene="phoQ"
                     /locus_tag="RHX79_001345"
     CDS             16808..18268
                     /gene="phoQ"
                     /locus_tag="RHX79_001345"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PhoQ"
                     /protein_id="HDV2196539.1"
                     /translation="MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSF
                     DKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDV
                     PWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVA
                     VNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSL
                     RPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLT
                     HSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLS
                     RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACK
                     YCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
                     EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE"
     gene            18344..19465
                     /gene="roxA"
                     /locus_tag="RHX79_001346"
                     /gene_synonym="ycfD"
     CDS             18344..19465
                     /gene="roxA"
                     /locus_tag="RHX79_001346"
                     /gene_synonym="ycfD"
                     /EC_number="1.14.11.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[50S ribosomal protein L16]-arginine
                     3-hydroxylase"
                     /protein_id="HDV2196540.1"
                     /translation="MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLA
                     MESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRE
                     LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLL
                     QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYV
                     LQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSR
                     HELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALD
                     ALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG"
     gene            complement(19611..20840)
                     /gene="pepT"
                     /locus_tag="RHX79_001347"
     CDS             complement(19611..20840)
                     /gene="pepT"
                     /locus_tag="RHX79_001347"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000359435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HDV2196541.1"
                     /translation="MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEE
                     MGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGD
                     IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNI
                     PHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIV
                     GNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLASMKGTVDRADMH
                     YIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHIID
                     IAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK
                     AVQVIVRIAELTAQRKS"
     gene            21090..22226
                     /gene="potA"
                     /locus_tag="RHX79_001348"
     CDS             21090..22226
                     /gene="potA"
                     /locus_tag="RHX79_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HDV2196542.1"
                     /translation="MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGE
                     FLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFP
                     HMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIAR
                     AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI
                     VVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGREC
                     NIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELE
                     NGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK"
     gene            22210..23067
                     /gene="potB"
                     /locus_tag="RHX79_001349"
     CDS             22210..23067
                     /gene="potB"
                     /locus_tag="RHX79_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000799378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HDV2196543.1"
                     /translation="MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFV
                     KMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLL
                     FLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI
                     LLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPA
                     MGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASR
                     LLNKKVELE"
     gene            23064..23858
                     /gene="potC"
                     /locus_tag="RHX79_001350"
     CDS             23064..23858
                     /gene="potC"
                     /locus_tag="RHX79_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HDV2196544.1"
                     /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT
                     KWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV
                     VMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE
                     AAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKI
                     YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK"
     gene            23855..24901
                     /gene="potD"
                     /locus_tag="RHX79_001351"
     CDS             23855..24901
                     /gene="potD"
                     /locus_tag="RHX79_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotD"
                     /protein_id="HDV2196545.1"
                     /translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE
                     QFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS
                     KLSNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYK
                     GSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPY
                     MEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN
                     FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAAS
                     SIYEEYYQKLKAGR"
     gene            24959..25420
                     /locus_tag="RHX79_001352"
     CDS             24959..25420
                     /locus_tag="RHX79_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001460774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3592 domain-containing protein"
                     /protein_id="HDV2196546.1"
                     /translation="MSQDSKVLSRAFLGIGLILLVISAIIFYYHFTFTKSAVHTEGII
                     VDAVWYNNHSNDVDDNGSWYPVVAFRPTPDYTLIFNSNIGSDFYEDSEGDRVNVYYPP
                     GHPEQAEINNPWVNFFKWGFVGIAGIIFGSVGLIITLPSTKKSRRKRKSRP"
     gene            25417..26205
                     /locus_tag="RHX79_001353"
     CDS             25417..26205
                     /locus_tag="RHX79_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDV2196547.1"
                     /translation="MKKFIILLSLLILLPLVATSKPLIPIMKTLFTDVTGTVPDAEEI
                     ARKAELFRQQTGIAPFIVILPDINNEASLRQNGKAMLAHASSSLSNVKGSVLLLFTTR
                     EPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQPT
                     PPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSWIFCYTTRFIYALKFAVAMTI
                     ANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR"
     gene            complement(26344..27165)
                     /gene="cobB"
                     /locus_tag="RHX79_001354"
     CDS             complement(26344..27165)
                     /gene="cobB"
                     /locus_tag="RHX79_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HDV2196548.1"
                     /translation="MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVL
                     VLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQP
                     EIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQ
                     VLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGH
                     VYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGL"
     gene            complement(27181..28092)
                     /gene="nagK"
                     /locus_tag="RHX79_001355"
     CDS             complement(27181..28092)
                     /gene="nagK"
                     /locus_tag="RHX79_001355"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HDV2196549.1"
                     /translation="MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVC
                     ELVAEADQRFGCKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRL
                     DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRL
                     PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQG
                     DEQARAHVERYLDLLAVCLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPV
                     ARVPRIERARHGDAGGMRGAAFLHLTD"
     gene            complement(28121..29365)
                     /gene="lolE"
                     /locus_tag="RHX79_001356"
     CDS             complement(28121..29365)
                     /gene="lolE"
                     /locus_tag="RHX79_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HDV2196550.1"
                     /translation="MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG
                     LSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTG
                     LVESGVNLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV
                     KLGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG
                     SSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM
                     VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG
                     VIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL
                     LASWYPARRASNIDPARVLSGQ"
     gene            complement(29365..30066)
                     /gene="lolD"
                     /locus_tag="RHX79_001357"
     CDS             complement(29365..30066)
                     /gene="lolD"
                     /locus_tag="RHX79_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415635.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HDV2196551.1"
                     /translation="MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSS
                     GSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF
                     TALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARAL
                     VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM
                     RDGRLTAELSLMGAE"
     gene            complement(30059..31258)
                     /gene="lolC"
                     /locus_tag="RHX79_001358"
     CDS             complement(30059..31258)
                     /gene="lolC"
                     /locus_tag="RHX79_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004976588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolC"
                     /protein_id="HDV2196552.1"
                     /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV
                     LSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVV
                     LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD
                     QIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGN
                     ITGWRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA
                     VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGA
                     LLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP
                     AEALRYE"
     gene            31520..32593
                     /locus_tag="RHX79_001359"
     CDS             31520..32593
                     /locus_tag="RHX79_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HDV2196553.1"
                     /translation="MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLS
                     KCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWSIFWVLTLWGVVQW
                     LALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF
                     SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATLMTCVKEVPLR
                     RHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQQFGMRSTSLLNVIGSN
                     TIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLGYPFVSLFICTVAGLLVRKL
                     SQRAFSDLLFSPPSLPAAISYSR"
     gene            32721..36167
                     /gene="mfd"
                     /locus_tag="RHX79_001360"
     CDS             32721..36167
                     /gene="mfd"
                     /locus_tag="RHX79_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDV2196554.1"
                     /translation="MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVL
                     IAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ
                     RGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHG
                     EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFP
                     TDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF
                     PANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNW
                     PRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESE
                     GRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDKVRNLALICESDLL
                     GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEY
                     LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA
                     ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR
                     LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM
                     ISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKE
                     RIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVV
                     REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND
                     FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWL
                     LTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF
                     SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI
                     ASAKTENELEEIKVELIDRFGLLPDPARTLLDVARLRQQAQKLGIRKLEGNEKGGVIE
                     FAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENA
                     IA"
     gene            36311..37273
                     /gene="ldtC"
                     /locus_tag="RHX79_001361"
     CDS             36311..37273
                     /gene="ldtC"
                     /locus_tag="RHX79_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtC"
                     /protein_id="HDV2196555.1"
                     /translation="MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGEN
                     KFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPRE
                     GIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTAN
                     IRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCI
                     RLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPI
                     TLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL"
     gene            complement(37356..37613)
                     /gene="bhsA"
                     /locus_tag="RHX79_001362"
     CDS             complement(37356..37613)
                     /gene="bhsA"
                     /locus_tag="RHX79_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple stress resistance protein BhsA"
                     /protein_id="HDV2196556.1"
                     /translation="MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAG
                     TNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK"
BASE COUNT         9501 a         9568 c         9314 g         9303 t
ORIGIN      
        1 ttagtcgttt agaaacaaat tatttttaat gtggtgtgct tcgtgacaat aaattaataa
       61 ccaacacacc ggcacaaatc aacatcatgc ctataatggc tggcaggtcc agccgttggc
      121 cgaaaaatcc ccatgacagt aagctaatca ggacaatacc gactcctgac cagatagcat
      181 aagcaatccc tgtaggaata taagccagcg tctgagctaa taaccagaat gatgcacaat
      241 aacaaataat tgtaccaaca gatggccata accgtgtaaa accttctgaa aacttcatta
      301 aggttgtacc aatgacctct gcaagtattg caccaccaag ataaatataa gggttcatag
      361 catattcttt cctgttcaaa ctggagagaa ttgtactaca gtttgaaatc aactcacctg
      421 tttcatcatt gtgtacccat tgatgttctt ttatataccc tcaatacgcg tttcatcgcg
      481 gcactctggc gacactcctt aaaaatcaga ttcgtgctca cctttccttc ccgttcttct
      541 ctggtagcga accggtaata caccgttcgc cagaccttac catcaacgac caggattcct
      601 ggccgcgcca ttttagccgc agcctgattt atgctggtta cggttgcgcc tgttaccgcg
      661 gcaacgtcct gtgcacagaa gctcttatgc gtccccaggt aatgaataat tgcctctttg
      721 cccgtcatac acttgctcct ttcagtccga acttagcttt aatttctgcg atcttcgcca
      781 gagcctgtgc acgatttaga ggtctaccgc ccataacagg aagttgtttt actggttcag
      841 ggatcgcctc accacggtta attctcgcag tcatatggac aagctcatct gcggccttac
      901 ggcgtaattc cgcatcagta agcgcattgg cccgcatgtt ctgatacagg ttggtaacca
      961 gccagtagtg cgcgtttgat ttccacggat aagactccgc atccggatac aggcctcgct
     1021 tccggcaata ctcgtaaacc atatcaacca gctcgctgac gtttggcagt ccggcgataa
     1081 cggatgcttc ttcccggcac catgcaacaa actgcccggg tgatggcaga aatggtcgat
     1141 tctgccgacg ggctacgcgc attccagcgt taacctgttc cattgtggtg atcccgtttt
     1201 cccggaaagc cagaacccac tggcggcgga tttcgttcag ttcattctgg tcacggttag
     1261 ccaggctcgc cgggaaagtt gccagtaact ggctgaacac accattgatg atctgcgcta
     1321 cctgctgtac ctgaggcttt tcgtcgtact gttccggcat gttgttggcg atccgacgca
     1381 tctgctcacg gtcaaagtta atcatctgtg cggcgatgtt tttcatagat ccaccccgta
     1441 aatccagtct gtgtttgtca ggtcgagttt tggtttgcta gctgtcacgc ctgcctgttg
     1501 cttgttacgg ttgatttcga gttgggtcca cttgtcgcgg agtttggccg gacttagcac
     1561 gttaccggac cagaagttgt cctggcatgc ccagcggaac agcacgcaca tgtcgcggtg
     1621 gttacgtccg tcacgttcac gcatcaggcg gatatcgtta gcccaccctg caaaattcgg
     1681 ttttctggct gatggcgcga tggtcttcac catgtcaaac atccactctg cggcggtcag
     1741 gtcttctgct gtcccccact tgctgccgct ctgaattgca gcatctggtt tcaccacagg
     1801 aagatcgttt tctggttggt cagaggattc gccagaattc tcggacgaaa aaggttttat
     1861 attgtctttt gttagtttgt cttttgtgtt tacctgattc gggtaaacgc ctttacctga
     1921 tttgggtaaa cttttcttac ctgattcagg taaatttacc tctttcaggt aaactttatt
     1981 tttcttacct gattcgggta atgttgacca ttcactgacc acattattaa taccgatatt
     2041 ccgcccgctc tgaatcaaaa tcccacgctt taccagaaca ctttttgcag cagaacactt
     2101 gtgcggcaat atcccggtca attcggacag ttgctcgttg ctcacccaat ccagtttttt
     2161 attaaagcca tatgttttgc gcatgacagc taggaagacc agaagctggt gctgtgttaa
     2221 tccggccagc atcacagctt ccagcaactc atttgcaatg cgcgtataac catcatcgag
     2281 atctgccacg cgcggctcct tttgtgccgc atccggcact ggaaaattga atatctcagc
     2341 agtgtttgcc ataattcctc ccgcaatgag tgtgttacga tttgcacctg aaagtcggtt
     2401 ctgttccagc agaccggctt tcgccatttc tgaacctgtc atatcgcccc cagcatggta
     2461 gtaaccatcg ccatcaatgg accagccaga tctgggtcca cacgaaacat cgacacaata
     2521 ccttcactaa tttccttcag tttctggtgg cgtggtgcgt tgagaatgac agcctgtttt
     2581 gcctcactta gttccttttc catttcagcc aacctagcca tgaagctatc ctgctcaacc
     2641 aggtaaccgc gatattccag cggtagtacc gccagaattg ccggggtcag ttcacgcacg
     2701 ttatttcggt atttttcaga atcgaatttg ttatcgagga agcggaacag cttctggcgt
     2761 gcacggctga catcatcagg gaaatcgatg gtgccgccgc cctgctcccg atactcattc
     2821 acaatgagtg tggcaacgac atcctgatta tcttcagccg accaagcgcg gacggcatca
     2881 cggatttttt cgtggcctgg cacctgtttt gtttgagaac gatttatcac cgcagtcggg
     2941 ctaaatccgc tagtctgttg gtatgtaagt ggttgcataa ttgactcctt tagtttgaat
     3001 tgactgttaa gttgattgct tattgttaaa gagcgtgaaa tggaaattta agctgcgttc
     3061 ttttcggtgt gtggaaacaa cttcggaaga tccgggcgaa tctggtatgc cttcactact
     3121 ccaccagtag ccgtaacaat gctgccgaca tgttcagggg atacctttgc tttgttgtga
     3181 agccacttat agacggcctg ctgtgaaact tcacaagcag cgcccagttt cttttgtgaa
     3241 ccaacgatat tgatcgctgt tttgatagct gggttcataa caacctccgt ggttaatttg
     3301 aatcaagatt aaaactatgg ttgtttttag tcaacaacca ttttcgtttg atggaataaa
     3361 accttggttg tacatttgga ctatgaaaac aacactctca gaaagactta aagaagccag
     3421 attagcgcga ggccttacac aaaaggcgct tggggatttg gtcggggtta gccaagctgc
     3481 tattcagaaa atcgaaacag ggaaagctaa tcaaacaact aaaatcgtgg agatcgcgaa
     3541 cgctttgggt gtgcgcgcag aatggttatc ttctggcgtt ggaaatatgt cagacagtac
     3601 agtgcaacca atacaatcaa ctgtcagcca ttccaaatac ttcaagattg acgttcttga
     3661 tatagaagtc agtgctgggc cgggagtcat caaccgtgag tttgtagaag ttctacgctc
     3721 ggttgagtac tcgtttgacg atgctcgtca catgttcgat ggtaggaagg cggaaaatat
     3781 ccgcatcatt aacgtgcgtg gtgacagcat gtcaggaacg atcgaaccag gtgatctgct
     3841 gttcgttgat atcacagtta aatctttcga cggtgatggt atctatgcgt ttctgtacga
     3901 cgacacagcc catgtaaagc gcctgcaaat gatgaaggat aagctgctgg tcatctctga
     3961 taacaaaagc tactcaccgt gggacccgat cgagaaagac gagatgaacc gggtgttcat
     4021 cttcggtaag gttattggga gcatgccgca gacatatagg aagcatgggt agtaccaatt
     4081 aaaaattatc aactgggcat tgtgctcatt cagtaaagaa ctaattccta tctttgctct
     4141 aggtagtaat attaagccac cgcaataata tctttaccta acggcgtaag aatcccggtc
     4201 accgtgccgg gttttctttt gccctcccct catcacacac accgttaaaa aaaccaccat
     4261 aacctcgctt cagttatcgc tatgcgattc aagtcacaaa ataaatccat cctaaataca
     4321 accagttata tctaaaacaa ccaataaaac aacttttgtt gttgacggta aaacaactat
     4381 agttttaaat aagttcgtcg caacaacaca acgatacggc aaccacctga ttcaccgttg
     4441 cgatgaccgc ttagatccgc agtttgaatt tcagcaggct tcggggagtg cgaggggtga
     4501 aacggacgcg tgaacgtcgg tgtgaccagc tgaaatcaac tcaacatttc ataccttagt
     4561 cgcttcaacg aggcggctta gttatgacaa ccggcggcca tccaccgcct gaatacgcgc
     4621 agaagtctct atatgttcag cagcccagct tacgggcagg agtttttatg gttcatcaac
     4681 attacggaac gcagaccgtt aatcgcggcg cggtcatgcc aggaatgctg gtcaaacaca
     4741 aagatggtac ctggactgca tcagctaatt tacgcggacg gctttatctg catcgcggca
     4801 tcgagcgcac ttatacccgt gatttgctcg tggaagtttt tctcgacgga cgcggtaacg
     4861 gcctgaatca ctaacccccc tttcctgttt tcctaatcag cctggcattt cgcgggcgct
     4921 attttcacag ccattttcag gagttcagcc atgaacgctt attacattca ggatcgtctt
     4981 gaggctcaga gctgggcgcg tcactaccag cagatcgccc gtgaagagaa agaggcagaa
     5041 ctggcagacg acatggaaaa aggcctgccc cagcacctgt ttgaatcgct atgcatcgat
     5101 catttgcaac gccacggggc cagcaaaaaa gccattaccc gtgcgtttga tgacgatgtt
     5161 gagtttcagg agcgcatggc agaacacatc cggtacatgg ttgaaaccat tgctcaccat
     5221 caggttgata ttgattcaga ggtataaaac ggatgagtac agcactcgca acgctggctg
     5281 ggaagctggc tgaacgtgtc ggcatggatt ctgtcgaccc acaggaactg atcaccactc
     5341 ttcgccagac ggcatttaaa ggtgatgcca gcgatgcgca gttcatcgca ttgttgatcg
     5401 tcgccaacca gtacggcctt aatccgtgga cgaaagaaat ttacgccttc cctgataagc
     5461 agaacggcat cgttccggtg gtgggcgttg atggctggtc ccgtatcatc aatgaaaacc
     5521 agcagtttga tggcatggac tttgagcagg acaatgaatc ctgcacatgc cggatttacc
     5581 gcaaggaccg taatcatccg atctgcgtta ccgagtggat ggatgaatgc cgccgcgaac
     5641 cattcaaaac ccgcgaaggc agagaaatca cggggccgtg gcagtcgcat cccaaacgga
     5701 tgttacgtca taaagccatg attcagtgtg cccgtctggc cttcggattt gctggtatct
     5761 atgacaagga tgaagccgag cgcattgtcg aaaataccgc atacactgca gaacgtcagc
     5821 cggaacgcga catcactccg gttaacgatg aaaccatgca ggagattaac actctgctga
     5881 ttgccctgga taaaacatgg gatgacgact tattgccgct ctgttcccag atatttcgcc
     5941 gcgacattcg cgcatcgtca gaactgacac aggccgaagc agtgaaagct cttggattcc
     6001 tgaaacagaa agcctctgag cagaaggtgg ctgcatgaca ccggacatta tcctgcagcg
     6061 taccgggatc gacgtgagag ctgtcgaaca gggagatgat gcgtggaaca aattacgact
     6121 cggcgtcatc acggcttcag aagttcgcaa tgtgatagca aaaccccgct ccggtaaaaa
     6181 gtggcctgac atgaaaatgt cctactttca caccctgctg gctgagattt gcaccggtgt
     6241 ggctccggaa gttaacgcta aggcgctggc ctggggaaaa cagtacgaga atgacgccag
     6301 agccctgttt gagtttactt ccggcgtgaa tgttactgaa tccccgatca tctatcgcga
     6361 cgaaagtatg cgcaccgcct gctctcccga tggtttatgc agtgacggca acggccttga
     6421 gctgaaatgc ccgtttacct cccgggattt catgaagttc cggctcggtg gtttcgaggc
     6481 cataaagtcg gcttacatgg cccaggtgca gtacagcatg tgggtgacac gaaaagatgc
     6541 ctggtacttt gccaactatg acccgcgtat gaagcgtgaa ggactgcatt atgccgtggt
     6601 tgagcgggat gaaaagtaca tggcgagttt tgacgagatg gtgccggagt tcatcgaaaa
     6661 aatggacgag gcactggctg aaattggttt tgtatttggg gagcaatggc gatgacgcat
     6721 cctcacgata atatccgggt aggcgcgatc actttcgtct actccattac aaagcgaggc
     6781 tgggtatttc ccggcctttc tgttatcaga aatccactga aagcacagcg gctggctgag
     6841 aagataaata ataaacagga ggatatatga gtcaggttgg taatcattca ttcgaatttc
     6901 cggcatcgca aggtgtacag ggtggtactg ttacactctt ccttaccata ccaggaagat
     6961 cgctggctcg tttcctcgct tcagataatt acggccatac actggcacgc tctcagcgag
     7021 aaattaatcc aaatcgagta cgaaaatttt taaattatct cactaacgca gactcaagaa
     7081 atgagccttt tatcattccc cctctcgtag gtaactgtga ttcgaatata gaatttgtac
     7141 cgtttggcaa cacaaatgtt ggtatagcca gaattcccct cgacgccgaa ataaaacttt
     7201 ttgatggtca acatcgtgca gctggcattg agatattttg ccgaagttcc ccatcaacgc
     7261 tcatggttcc catgatgctt acaatgaatc tgccgctaaa aacccggcag cagttctttt
     7321 cggacataaa taacaacgtt tctaagccat cagcgaccat caatatggcg tataacggcc
     7381 gggatgatat tgctcaggga atgatatcct tcctgaccca acatactgta tttgccgata
     7441 taaccgattt tgaacacaac gtagtgccat taaaaagtaa tatgtgggtg agtttcaagg
     7501 cactcactga tgcaacgtca aagttcgcta ggaacggcaa tcaacaactt gaaatgggat
     7561 atatagaatc tgtctgggag gcatggatta cactaactca gattgactca atccgacatg
     7621 gtgtacacca cgctacgtac aagcgcgatt atattcagtt ccatggagta atgattaacg
     7681 ctttcggttt tgcggttcaa cagatgatgg ttaatcattc catcgcagaa ataacttcta
     7741 tgatcgaaaa actatgtgca actaccagct ctgcagaaag agaggatttt tttctgatgg
     7801 ataactgggc ggggatctgc acgaaagcca gccaggaaaa actatctgtt attgccaatg
     7861 tggcagcgca gaaagcagca gcaaacagac tgatacaagc ttttaccaaa ggaagtctgg
     7921 aaacaactta atgaatcaac attgtctcat atcagcatgc tgtacggcgt ctttaaggaa
     7981 cggtgagcat gaaaaacaaa atcatcatgg agctacaggc tcctttttta ttattcgcat
     8041 tcaccctcaa gcgtattaac caacaattca gggattaatg aaagatggca gacatcattg
     8101 attcagcatc agaaattgaa gaattacagc gcaacacagc aataaaaatg cgccgcctga
     8161 accaccaggc tatatctgcc actcattgtt gtgagtgtgg cgatccgata gatgaacgaa
     8221 gacgcctggc cgttcagggt tgtcggactt gtgcaagttg ccaggaggag atcgaactta
     8281 agaacaaaca atggggactg tgatggcttc aaagcagcaa atttcaacat cgtccaactg
     8341 aggtgtaaaa atgttcagaa tcatttttcc taacacctgg tacgtcgacc accacggcac
     8401 tccctgcaaa atcctgcgtt ctacccacaa caaagttcac tacatccgaa aaggcagaac
     8461 atgtatcgcc agcatgttcc gctttaatca tgactttgaa cctgtgaata aagctgatgc
     8521 agatcggata gcagaagaga tcgaaacggc agaacacatt aagaagttac gtgccatacg
     8581 caggaaatag aaaaattgat aaattcaata ctgcattact cagcattaaa tttatctcta
     8641 tgaccagtca agagatgtac ctgccatgag cttaatatca tgtcagatat atcggtcaca
     8701 aactccctca gcagctaaga ggaggacaaa tgtctcgact aatcacttta caggactggg
     8761 ctaaagaaga atttggggac ttagcaccaa gtgagcgagt tctgaaaaaa tacgcgcaag
     8821 ggaaaatgat ggccccaccc gctataaaag ttggtcgcta ctggatgatt gaccgaaatt
     8881 cccgttttgt aggaacgctt gcagaaccgc aactcccaat aaacgcaaac ccaaaactcc
     8941 aacggataat cgctgatggc tgctagaccc cgatctcaca aaatctctat acccaattta
     9001 tattgcaaat tagataagcg aaccggaaag gtatattggc aatacaaaca tccactatcc
     9061 ggtcgttttc atagcttagg aactgatgag aatgaagcaa aacaagttgc tactgaagca
     9121 aataccatta ttgctgaaca acgtaccaga caaatattaa gcgtcaatga gcgtctggaa
     9181 agaatgaaag gcaggcgctc agacattacg gtgacagaat ggcttgataa atatatttct
     9241 atccaggagg acaggctgca acataatgaa ctaagaccca actcctatcg gcaaaaaggc
     9301 aaacccattc gtcttttccg tgagcattgt ggaatgcaac acctcaagga tattaccgca
     9361 cttgatattg ccgaaataat tgatgctgta aaggctgaag gtcataacag gatggcgcaa
     9421 gtcgtgagaa tggtgttgat cgacgtcttc aaagaagcac aacacgcagg acatgttccg
     9481 ccaggattta accctgcgca ggcaacaaaa caaccgcgaa atcgagtaaa ccgccaaaga
     9541 ttgtcactgc tcgaatggca ggcaatattt gaaagcgtaa gcagacggca gccctattta
     9601 aaatgcggca tgctacttgc tcttgttact ggacaacgtt taggcgatat ctgcaatttg
     9661 aaattctctg atatatggga cgacatgttg cacattactc aggaaaaaac cggttcaaaa
     9721 cttgctattc cgcttaacct gaaatgcgat gctctgaata ttacccttcg tgaagttata
     9781 tctcagtgca gggatgctgt tgttagtaaa tatctggtcc attaccgtca cactacctct
     9841 caagcaaaca gaggagacca ggtttctgca aatactctga caacggcttt taaaaaggcc
     9901 cgggaaaaat gtggcataaa atgggagcaa ggaactgcgc ccacatttca tgagcagcga
     9961 tctctctcag aacggttata tcgggaacag ggtctggata cgcaaaagtt gttaggccat
    10021 aaatccagaa aaatgaccga ccgatacaat gatgatcgtg gtaaagactg gattatcgta
    10081 gatatcaaaa cagcatagaa aatagccaat tttggggaag ggttttgggg aaagttttgg
    10141 ggaagatttt acatcatcat aaatcaacgg gcgtgttata cgcccgtttc aatatttaac
    10201 acatgtagtg attacatatt cttgatgatc gcgtcaccaa actctgaaca tttcagcagt
    10261 ttagcgcctt ccatcagacg ttcgaagtca taggttacgg tcttggcatt gattgcgcct
    10321 tccatacctt taacaatcag gtctgcggct tcggtccaac ccatgtggcg taacatcatc
    10381 tcagcggaga gaataataga gccagggttt actttgtcct gaccggcgta tttcggcgca
    10441 gtaccgtggg tggcttcaaa cagggcgcat tcgtcaccga tgtttgctcc aggggcgata
    10501 ccgataccgc caacctgcgc tgccagagcg tcagaaatgt agtcaccgtt caggttcata
    10561 caggcgataa catcatattc agccggacgc agcaggatct gttgcaggaa tgcatcagca
    10621 atcacgtctt taatgacgat ctctttgccg gtgttcgggt ttttaacttt cagccacggg
    10681 ccgccgtcga tcagttcacc gccaaactct tcacgcgcca gctggtagcc ccagtcttta
    10741 aacgcgcctt cggtgaactt catgatgttg cctttgtgca ccagagtcac agagtcacga
    10801 tcgttagcaa ttgcgtattc gatcgctgca cgaaccagac gtttggtgcc ttcttccgaa
    10861 cacggcttaa taccgatacc acaatgttcc gggaagcgaa ttttcttcac ccccatctct
    10921 tcacgcagga atttaatcac tttctcggcg tcggcagagt ctgctttcca ttcgataccc
    10981 gcataaatgt cttccgagtt ttcacggaag ataaccatat cggtcagttc agggtgttta
    11041 accgggcttg gagtgccctg atagtaacgt accggacgca ggcagatgta gagatccagt
    11101 tcctggcgca gggcaacgtt cagagagcga ataccgccac caacaggagt ggtcagcgga
    11161 cctttaatgg caacgcgata ttcacgaatc agatcaaggg tttcagcagg cagccagaca
    11221 tcctgaccat aaacctgtgt ggatttttca ccggtgtaaa tttccatcca ggagatttta
    11281 cgctcgcctt tataggcttt ctcgactgca gcgtcgacca ctttcagcat ggctggggtt
    11341 acatctacac cgattccatc accttcaatg taagggataa tcggattttc aggaacgttg
    11401 agtttgccgt tttgcagggt gatcttcttg ccttgtgccg gaacaactac tttactttcc
    11461 attcacctct ccttcgagcg ctactggttt gctcgtctgc caccacgttg catatgcgtt
    11521 agcgtcctgc gatacggatg ctttagagca attttttgtt aatgatttgt aattggcttg
    11581 tcaatactac cctattgttt gccgtcatga aagatgcgcg ttattaggct ataatgcggc
    11641 aattcataat ctctgaaaat accatgcaaa aaacttcttt tagaaatcac caggttaagc
    11701 gattcagctc gcaacgttct accaggcgta aacctgaaaa ccagcccacg cgtgtgatcc
    11761 tgttcaataa accctacgat gttcttccgc agttcaccga tgaagccgga cgcaaaacat
    11821 taaaagaatt catcccggtt cagggcgttt atgcagcagg tcgtcttgac cgcgatagcg
    11881 aagggttact ggtgctgacc aataacggcg cgttgcaggc gcgtttaacc cagccgggca
    11941 aacgcaccgg gaaaatctat tatgtgcagg tggaaggtat tcccacacaa gacgcacttg
    12001 aagccttgcg caatggcgta accttaaatg atggccctac cctgcccgca ggcgcggagc
    12061 tggttgacga acccgcgtgg ttatggccgc ggaatccacc aattcgtgaa cgcaaaagta
    12121 ttcccaccag ctggctgaag atcaccttat atgaaggacg taatcgccag gtgcgccgca
    12181 tgaccgccca tgttggtttc cccacgctgc gactgattcg ctatgcgatg ggagattact
    12241 ctttggataa tcttgccaat ggcgaatggc gagaagtgac agattaagga tgcaaaatgt
    12301 ttaaaccgca cgttaccgtt gcttgcgtgg tgcacgcaga aggcaaattt ttagtcgttg
    12361 aagagacgat taatggtaaa gcgttatgga accaacctgc cgggcatctg gaagccgatg
    12421 aaaccttagt ggaagccgcc gcccgtgaac tgtgggaaga aaccggcatc agcgcgcagc
    12481 cgcaacactt tattcgtatg catcagtgga ttgcgccaga taaaacgccg tttttgcgtt
    12541 tcctctttgc cattgagctt gagcaaatat gcccgaccca gcctcatgac agcgatatcg
    12601 actgctgtcg ttgggtcagc gccgaagaaa ttttacaggc gtcaaatctt cgttcgccgc
    12661 tggtggcgga aagtatccgt tgttatcaaa gcgggcaacg ctatccgctg gagatgattg
    12721 gcgattttaa ctggcctttt acaaagggtg tcatctaaaa ggctgcgtga tagaatacgc
    12781 cgccttgaag ttcaatgtcg tgagtgatcc aatgtctgaa accgcaaaaa aagtaatcgt
    12841 cggcatgtcc ggcggtgtcg attcctccgt ttctgcctgg ctgttgcaac aacagggata
    12901 tcaggttgaa ggcctgttta tgaagaactg ggaagaagac gacggtgagg aatattgcac
    12961 agcggcagcg gatctggctg atgcccaggc tgtctgcgac aagctcggca ttgaactgca
    13021 caccgttaac tttgctgccg agtactggga caacgtcttc gaactgttcc ttgccgaata
    13081 taaagccggt cgcacgccga atccggatat tctgtgcaac aaagagatca aatttaaagc
    13141 cttcctcgaa tttgccgccg aagatttagg tgccgattat atcgctaccg gtcattacgt
    13201 acgtcgggcc gatgtcgatg gcaagagccg cctgctgcgt ggtctggaca gcaataaaga
    13261 ccagagctac ttcctttata cgctcagcca tgagcagatt gcgcaaagcc tgttcccggt
    13321 cggcgaactg gaaaaaccgc aggtgcgtaa gattgctgaa gatcttggtc tggtcaccgc
    13381 gaagaaaaaa gactctaccg gcatttgctt cattggcgaa cgtaaattcc gcgagttcct
    13441 gggccgttat ctcccggcgc aaccgggcaa aatcattacc gtcgatggcg atgaaattgg
    13501 tgagcaccag gggctgatgt atcacactct cggtcagcgt aaaggtctgg gtatcggtgg
    13561 caccaaagaa ggtaccgaag aaccgtggta tgtggtggac aaagacgtcg aaaacaacat
    13621 tctggttgtc gctcagggcc atgaacaccc gcggctgatg tctgtcgggt tgattgccca
    13681 gcagttgcac tgggtcgatc gcgaaccatt caccggcact atgcgttgca cggtaaaaac
    13741 ccgctatcgc cagaccgata tcccttgcac cgtcaaggcg ctggacgatg atcgcattga
    13801 agtgattttc gatgaaccgg ttgccgccgt gacgccgggc cagtctgccg tcttctataa
    13861 cggtgaagtg tgcctcggtg gcggtattat tgagcagcgt ctgccgctgc cggtctgatt
    13921 attatcttta cttaaaacaa ggaagcagtg aacgtggcaa agaattacta tgacatcacc
    13981 ctcgccctgg ccggtatttg tcagtcggca cgcctggtgc aacaactcgc tcaccagggg
    14041 cattgtgatg ccgatgcgct acacgtctca ctcaacagta ttattgatat gaaccccagc
    14101 tcgacgctgg cggtttttgg cggtagcgaa gccaacctgc gcgtcgggct ggaaaccctg
    14161 ctcggcgtgc tcaatgccag cagtcgccag ggcttaaacg ctgagttaac ccgctacaca
    14221 ctcagcttga tggtgcttga gcgcaaactc tcctcagcga aaggcgcgct cgacactctg
    14281 ggcaaccgga tcaacggcct gcaacgccag ctcgaacact tcgatttaca gtccgaaacg
    14341 ctgatgagcg cgatggctgc tatctatgtt gatgtgatca gcccgcttgg cccgcgcatt
    14401 caggtcaccg gttcccctgc tgtactgcaa agcccacaag tgcaggcgaa agttcgcgca
    14461 accctgctgg caggcattcg cgccgccgtg ctctggcacc aggtcggcgg cggacgtctg
    14521 caactgatgt tttctcgtaa tcgcctgacc actcaggcaa aacaaattct tgctcattta
    14581 accccggagt tgtgatctat ggaattatcc tcactgaccg ccgtttcccc tgtcgatgga
    14641 cgctacggcg ataaagtcag cgcgctgcgc gggattttca gcgaatatgg tttgctgaaa
    14701 ttccgtgtac aagttgaagt acgttggctg caaaaactgg ccgcgcacgc agcgatcaag
    14761 gaagttcctg cttttgctgc cgacgcaatc ggttaccttg atgcaattgt cgccaatttc
    14821 agcgaagaag atgccgcacg catcaaaacc atcgagcgta ccactaacca cgacgttaaa
    14881 gcggttgagt atttcctgaa agaaaaagtg gcggagatcc cggaactgca cgcggtttct
    14941 gaattcatcc actttgcctg tacttcggaa gatatcaata acctctccca cgcattaatg
    15001 ctgaaaaccg cgcgtgatga agtgatcctg ccgtactggc gtcaactgat tgatggcatt
    15061 aaagatctcg ccgttcagta ccgcgatatc ccgctgctgt ctcgtaccca cggtcagcca
    15121 gccacgccgt caaccatcgg taaagagatg gcaaacgtcg cctaccgtat ggagcgccag
    15181 taccgccagc ttaatcaggt ggagatcctc ggcaaaatca acggcgcggt cggtaactat
    15241 aacgcccata tcgccgctta cccggaagtt gactggcatc agttcagcga agagttcgtc
    15301 acctcgctgg gtattcagtg gaacccgtac accacccaga tcgaaccgca cgactacatt
    15361 gccgaattgt ttgattgcgt tgcgcgcttc aacaccattc tgatcgactt tgaccgtgac
    15421 gtctggggtt atatcgccct taaccacttc aaacagaaaa ccattgctgg tgagattggt
    15481 tcttccacca tgccgcataa agttaacccg attgacttcg aaaactccga agggaatctg
    15541 ggcctttcca acgcggtatt gcagcatctg gcaagcaaac tgccggtttc ccgctggcag
    15601 cgtgacctga ccgactccac cgtgctgcgt aacctcggcg tgggtatcgg ttatgcgctg
    15661 attgcgtatc aatccaccct gaaaggcgtg agcaaactgg aagtaaaccg tgaccatctg
    15721 ctggatgagc tggatcacaa ctgggaagtg ctggctgagc caatccagac agttatgcgt
    15781 cgctatggca tcgaaaaacc gtacgagaag ctgaaagagc tgactcgcgg taagcgcgtt
    15841 gacgccgaag gcatgaagca gtttatcgat ggtctggcgt tgccagaaga agagaaagcc
    15901 cgcctgaaag cgatgacgcc ggctaactat attggtcgag ctatcaccat ggttgatgag
    15961 ctgaaataaa ctcgtatcag tgccggatgg cgatgctgtc cggcctgttt attaaaatta
    16021 tccacttttt cttttttcac tttacctccc ctccccgctg gtttatttaa tgtttacccc
    16081 cataaacaca taatcgcgtt acactatttt aataattaag acagggagaa ataaaaatgc
    16141 gcgtactggt tgttgaagac aatgcgttgt tacgtcacca ccttaaagtt cagattcagg
    16201 atgctggtca tcaggtcgat gacgcagaag atgccaaaga agccgattat tatctcaatg
    16261 aacatttacc ggatattgcg attgtcgatc tcggattgcc tgacgaggac ggtctgtcac
    16321 tgattcgccg ctggcgtagc aatgatgttt cactgccgat tctggtatta accgcccgtg
    16381 aaagctggca ggacaaagtc gaagtattaa gtgccggtgc tgatgattac gtgactaaac
    16441 cgtttcatat tgaagaggtg atggcgcgaa tgcaggcatt aatgcggcgt aatagcggcc
    16501 tggcttcaca ggtcatttcg ctacccccgt ttcaggttga tctctctcgc cgtgaattat
    16561 ctattaatga cgaagtgatc aaactgaccg cgttcgaata caccattatg gaaacgttga
    16621 tacgcaataa tggcaaagtg gtgagcaaag attcgttaat gctccaactc tatccggatg
    16681 cggagctgcg ggaaagccat accattgatg tactgatggg acgtctgcgc aaaaaaattc
    16741 aggcacaata tccgcaagaa gtgattacta ccgttcgcgg ccagggctat ttgttcgaat
    16801 tgcgctgatg aaaaaattac tgcgtctttt tttcccgctc tcactgcggg tacgttttct
    16861 gttggcaacg gctgcggtag tactggtgct ttcgcttgcc tacggaatgg tcgcgctgat
    16921 cggttatagc gtcagtttcg ataaaactac gtttcggctg ttacgtggcg agagcaatct
    16981 gttctatacc cttgcgaagt gggaaaacaa taagttgcat gtcgagttac ccgaaaatat
    17041 cgacaagcaa agccccacca tgacgctaat ttatgatgag aacgggcagc ttttatgggc
    17101 gcaacgtgac gtgccctggc tgatgaagat gatccagcct gactggctga aatcgaatgg
    17161 ttttcatgaa attgaagcgg atgttaacga taccagcctc ttgctgagtg gagatcattc
    17221 gatacagcaa cagttgcagg aagtgcggga agatgatgac gacgcggaga tgacccactc
    17281 ggtggcagta aacgtctacc cggcaacatc gcggatgcca aaattaacca ttgtggtggt
    17341 ggataccatt ccggtggagc taaaaagttc ctatatggtc tggagctggt ttatctatgt
    17401 gctctcagcc aatctgctgt tagtgatccc gctgctgtgg gtcgccgcct ggtggagttt
    17461 acgccccatc gaagccctgg caaaagaagt ccgcgaactg gaagaacata accgcgaatt
    17521 gctcaatcca gccacaacgc gagaactgac cagtctggta cgaaacctga accgattgtt
    17581 aaaaagtgaa cgcgaacgtt acgacaaata ccgtacgacg ctcaccgacc tgacccatag
    17641 tctgaaaacg ccactggcgg tgctgcaaag tacgctgcgt tctctgcgta gtgaaaagat
    17701 gagcgtcagt gatgctgagc cggtaatgct ggagcaaatc agccgcattt cacagcaaat
    17761 tggctactac ctgcatcgtg ccagtatgcg cggcgggaca ttgctcagcc gcgagctgca
    17821 tccggtcgcc ccactgctgg acaatctcac ctcagcgctg aacaaagtgt atcaacgcaa
    17881 aggggtcaat atctctctcg atatttcgcc agagatcagc tttgtcggtg agcagaacga
    17941 ttttgtcgag gtgatgggca acgtgctgga taatgcctgt aaatattgcc tcgagtttgt
    18001 cgaaatttct gcaaggcaaa ccgacgagca tctctatatt gtggtcgagg atgatggccc
    18061 cggtattcca ttaagcaagc gagaggtcat tttcgaccgt ggtcaacggg ttgatacttt
    18121 acgccctggg caaggtgtag ggctggcggt agcccgcgaa atcaccgagc aatatgaggg
    18181 taaaatcgtc gccggagaga gcatgctggg cggtgcgcgg atggaggtga tttttggtcg
    18241 ccagcattct gcgccgaaag atgaataaat atgtccatac ttcacgcatt acgttaagca
    18301 tccgttataa tcggttgcag ataccagcct gtggatgctt aacatggaat accaactcac
    18361 tcttaactgg cccgattttc ttgaacgtca ctggcagaaa cgcccggtgg tgttaaaacg
    18421 cggctttaat aattttattg acccgatctc tccagacgag ttggcgggtc tggcgatgga
    18481 aagcgaagtt gacagtcgac tggtcagtca ccaggatggc aaatggcagg tcagccacgg
    18541 cccgttcgaa agctacgatc atctcggtga aaccaactgg tcattactgg tacaggcagt
    18601 gaaccactgg catgagccga ccgccgcgct gatgcgaccg ttccgtgaac taccggactg
    18661 gcgtattgat gatctgatga tctctttttc tgtaccgggc ggcggcgtcg gcccgcatct
    18721 cgatcagtac gacgtgttta tcattcaggg taccggtcgt cgtcgctggc gagtgggcga
    18781 aaagctgcaa atgaaacagc actgtccgca cccggatctg ttacaggtcg atccgttcga
    18841 agccatcatc gatgaagagc tggagcctgg cgatattctt tatattccgc caggattccc
    18901 gcatgaaggc tacgcgctgg aaaatgcgat gaactattcc gtgggttttc gcgcgccaaa
    18961 tacgcgggaa ttaattagcg gatttgccga ttatgtgctg caacgtgaac tgggcggcaa
    19021 ctactacagc gatccggatg ttccacctcg cgctcatcct gcggacgttc tgccgcaaga
    19081 gatggataaa ctgcgtgaga tgatgctcga attgatcaac cagccggaac actttaagca
    19141 atggtttggc gagtttatat cccagtcacg tcatgaactg gatatcgcgc cgccggaacc
    19201 gccttatcag ccagatgaaa tctacgatgc gctgaaacaa ggtgaagtgc tggtgcgcct
    19261 gggtggtctg cgcgtattgc gcattggcga cgacgtgtat gccaatggtg agaagatcga
    19321 ttccccgcac cgtccggcac tggatgcact cgccagcaac attgcgctga ctgcggagaa
    19381 ttttggcgat gcgctggaag atccgtcatt cctcgcgatg ctcgcggcgc tggtcaatag
    19441 cgggtattgg ttcttcgaag ggtaagtttg gatttaagcc ggatgcggcg ctgattgcgc
    19501 cttatcgtgc ctacatgcac tgaacgcctg taggcacgat aagtatgtgg accagtatca
    19561 atataacggt ttcatcccgg taattggcag tccacatacg catcgggcaa tcacgacttc
    19621 cgttgcgccg ttaactcggc aatacggaca atcacctgca ccgctttttc cataccttcc
    19681 agagtcacaa actcatgctt accatgatag ttgtaaccgc cagtgaacag gttcgggcac
    19741 ggtaatccca taaacgacaa ctgcgcgccg tcggtaccgc cgcggatcgg tttcagttcc
    19801 ggttcaatat cgcagtcacg catcgcctgc tgggcgatat cgataatatg cggatgctca
    19861 accactttct cgcgcatatt gtagtaactg tcttcaatca ccagttcaat gtagcaatca
    19921 ggatgtaacc ctttgcccac ttttttggcg atctccatca ttttacgttt acgcgcttca
    19981 aactgtttac ggtcgaaatc acggatgatg tagtgcatat cggctcggtc aacggtgcct
    20041 ttcatgctcg ccaggtgata gaaaccttca tagccttctg tcatttccgg gctttcatcc
    20101 gccggaactt ccgcatgaat acgtgccgcc agcgacagcg catttaccat cactcctttc
    20161 gccgtgcccg gatgaacatt gttaccgaca attttgatat tgaccgatgc ggcgttgaag
    20221 ttttcaaact ccagttcgcc tacgccacca ccgtcaacag tgtaagccca gcgggcatcg
    20281 aaggcatcaa catcaaaatg tttcgcccct ttgcccactt cttcatccgg ggtaaaggcg
    20341 acgcgaatat caccatgcgg aatgtttttc tgttgcaata ccgccagcgc ggtcatgatt
    20401 tctgcaatac ctgctttgtc atcggcacct aacaaggttt taccatcggt ggtaatcaac
    20461 gtctgaccca gtagctgatg cagcaccggg aacataaccg gtgataaaac ttcatcgccg
    20521 atacccagcg caatatcgcc accgcgatag ttttcaacaa tttgcggatt cacatttttg
    20581 ccgctgcaat ccggtgaggt atccacatga gaaataaagc caatcgccgg gatatcgcca
    20641 gggacgttag ccggtaacgt cgccatcaaa gtgcccttct cacttaaggt cacattgata
    20701 agccccatct cttcgagctg ctctttcagc agatgcaata acttccattg gccttccgtg
    20761 ctgggaacct gtctcacccc tgcttttgat tgggtatcca gagacacgta gttcaaaaat
    20821 cgctcaagta gtttatccat gtagtcaccc tcactttttg tgacaacatt attaagaagc
    20881 aagaaaagac aaatattgcg tcaggtcact tttacccctg caagcgggaa tatttatcag
    20941 cattacctta atgaatataa agctaagcca gtaattcaca acaaagattg gcgattcaag
    21001 cggtttgccg tagaattacc gccctcatta agagtcacca aggtggttaa ccacaaaccc
    21061 cgcatcggta agccatccgt tgcgtttaca tgggacagag taaaaaattg aataaacaac
    21121 cgagttcgct ttcaccgctg gtgcaattgg cgggaattcg caaatgcttt gatggtaaag
    21181 aggtcattcc ccagctggat ctgactatca acaatggcga gttcctcacg ctgcttggcc
    21241 cttctggctg cggtaaaaca accgttcttc gcctgattgc aggtctggaa actgttgatt
    21301 ccggacgcat catgctggat aacgaggaca tcacccacgt tccggcggaa aaccgctatg
    21361 tgaacactgt tttccaaagc tacgcacttt tcccccacat gaccgtgttc gaaaatgtgg
    21421 cctttgggtt gcgcatgcaa aaaacccccg ctgctgaaat tacgccccgc gtgatggaag
    21481 ccctgcggat ggtgcagctg gaaaccttcg ctcaacgcaa accgcatcag ctctctggtg
    21541 gtcaacagca acgtgtcgcc attgcccgcg cggtggttaa caagcctcgt ctgttgttgc
    21601 tggatgagtc gctctcagcg ctggattaca aactgcgtaa gcaaatgcag aacgagctga
    21661 aagcgttaca gcgtaagctt ggcattacat tcgtcttcgt gactcacgac caggaagaag
    21721 cactcaccat gtcggacagg attgtggtga tgcgcgatgg tcgcattgag caagacggca
    21781 cgccgcgtga aatctacgaa gagccgaaaa acctgtttgt tgccggcttc attggcgaaa
    21841 tcaatatgtt taacgccacg gtcatcgaac gtctcgacga gcagcgcgta cgcgccaacg
    21901 ttgaaggccg cgaatgtaat atctacgtta acttcgccgt tgaaccgggg caaaaactgc
    21961 atgttctgct gcgcccggaa gacttacgtg ttgaagagat taacgacgac aaccacgctg
    22021 aagggctgat tggttacgtt cgcgagcgta actacaaagg catgacgctg gagtcggttg
    22081 ttgaacttga aaatggcaag atggtgatgg tcagcgaatt cttcaatgaa gacgaccctg
    22141 actttgacca ctctctcgac caaaaaatgg ccattaattg ggtagaaagc tgggaggtcg
    22201 tactggctga tgaagaacac aagtaagttc cagaatgtag tgattgtcac tattgtcggt
    22261 tggcttgtgt tgtttgtctt tctgcccaac ctgatgatca ttggcaccag ctttttgacc
    22321 cgcgacgacg ccagtttcgt caaaatggtc tttacgctgg ataactacac gcgtctgctc
    22381 gatccgctct attttgaagt gctattgcac tcgctgaata tggcgctgat cgccaccctc
    22441 gcctgcctgg tgctgggcta cccgtttgcc tggtttctgg cgaagctgcc acacaaggtg
    22501 cgtccgctgc tgctgtttct gctgattgtt cccttctgga ccaactcatt gattcgtatc
    22561 tacgggctga aaattttcct cagcaccaaa ggctatctca acgagttttt gctctggctg
    22621 ggcgttatcg acacaccaat tcgtatcatg ttcacgccca gtgcggtgat tatcggtctg
    22681 gtttacattc tgctaccgtt tatggtgatg ccgctgtact ccagtatcga aaaactggat
    22741 aagccgttgc ttgaggcggc gcgcgatctc ggtgccagca agttacagac ttttatccgt
    22801 atcattattc cactgacgat gccgggaatt attgccggat gtctgctggt gatgctgcca
    22861 gcgatgggcc tgttctatgt atccgacctg atgggcggtg cgaaaaacct gctgatcggt
    22921 aacgtcatca aggtccagtt cctcaatatt cgtgactggc cgtttggtgc agccaccagc
    22981 attacgctga ctatcgtaat gggcctgatg ttgctggttt actggcgcgc ttctcgtctg
    23041 ctgaataaaa aggtggaact cgaatgatcg gtcgactgct tcgcggcggt tttatgaccg
    23101 ctatctacgc gtacctgtat atcccaatca ttattttgat tgtgaactcc tttaacagct
    23161 cgcgctttgg catcaactgg cagggtttta ccaccaaatg gtatagcctg ctgatgaaca
    23221 acgacagcct gttacaggca gcgcagcatt cactaacaat ggcggtgttt tcggcgacat
    23281 ttgctacgct tatcggttca ctgacggcag ttgcgctgta ccgttatcgc tttcgtggta
    23341 agccgttcgt tagcggaatg ctgtttgtgg tgatgatgtc accagatatc gtgatggcga
    23401 tttctctgct ggtgctgttt atgctgctgg gtattcagct tggcttctgg tcgctgctgt
    23461 tctcgcatat caccttctgc ctgccgtttg tggtggtgac ggtgtattcg cgcctgaaag
    23521 gttttgacgt gcggatgctg gaagcggcga aagatctcgg tgccagtgaa tttaccattc
    23581 tgcgaaaaat cattctgcca ctggcaatgc ctgcggtggc ggcgggctgg gtgttaagct
    23641 ttaccctgtc gatggacgat gtggtagttt cttcgttcgt caccggacca agttatgaaa
    23701 ttctgccgtt aaaaatttat tcgatggtca aagtcggcgt atcgccggaa gttaacgcgc
    23761 tggcaaccat attactggtg ctgtcgctgg tgatggttat tgccagccag cttattgctc
    23821 gtgataaaac gaaaggtaac acaggggacg ttaaatgaaa aaatggtcac gccacctgct
    23881 cgcggcgggt gctctggcac tgggcatgag cgccgctcac gccgatgaca acaatacgct
    23941 gtatttctac aactggaccg agtacgtgcc gccaggactg cttgaacagt tcaccaaaga
    24001 aaccggtatt aaggttatct attcgactta cgagtcgaac gaaaccatgt acgccaagtt
    24061 gaaaacgtac aaagacggtg cctacgacct ggtggttcct tcaacctatt acgtcgataa
    24121 aatgcgtaaa gaagggatga tccagaagat cgacaagtcg aagttaagca atttcagcaa
    24181 cctcgatcca gacatgctca acaagccgtt tgacccgaat aacgactact ccattccgta
    24241 tatctggggg gcgacggcga ttggcgttaa cggtgatgcg gtagatccga aatccgttac
    24301 cagctgggcc gatctgtgga agcctgagta caaaggtagc ctgctgctga ccgacgatgc
    24361 ccgtgaagtg ttccagatgg cgctgcgcaa actgggctac tccggtaaca ctaccgatcc
    24421 gaaagagatt gaagctgcat ataacgagct gaaaaaactg atgccaaacg tcgcagcgtt
    24481 taactccgat aacccggcta acccgtacat ggaaggcgaa gttaacctcg gcatgatctg
    24541 gaacggctct gctttcgttg cacgccaggc gggtacgcca attgacgtgg tgtggccgaa
    24601 agaaggcggc attttctgga tggacagcct ggcgatcccg gcaaatgcca aaaacaaaga
    24661 aggcgcgctg aaattgatca acttcctgct gcgcccggat gtggcaaaac aggttgccga
    24721 aactatcggt tatccaacgc caaaccttgc ggcgcgtaag ctgttaagcc cggaagtggc
    24781 gaacgataaa acgctctacc cggatgctga aaccattaaa aatggtgaat ggcagaatga
    24841 cgttggcgca gccagcagca tttatgaaga gtattatcag aagctgaaag caggacgtta
    24901 attcagcaaa cgggcggtgg tattaccgcc cgttttttag ttagcaagga tgtggctaat
    24961 gagtcaggac agtaaagttt tatcccgcgc ttttctcggt atcggtctga tattgctcgt
    25021 tatttctgca atcatctttt attaccattt tacttttacc aaaagcgcgg ttcatacaga
    25081 aggaatcatt gttgatgccg tttggtacaa caatcactca aacgacgtcg atgataatgg
    25141 ttcctggtat ccagtggttg cctttcgccc tacgccagat tacacgctaa ttttcaattc
    25201 gaatatcggt agtgattttt atgaagatag cgaaggtgac agagtcaatg tctattatcc
    25261 gccagggcat ccagaacaag ccgaaataaa caatccctgg gttaattttt ttaaatgggg
    25321 ctttgttggc atagcaggca ttattttcgg tagtgtcggt ctgataatca cgctcccctc
    25381 caccaaaaaa tctcgcagga aacggaagtc ccgcccataa aaaaattcat tatactgctc
    25441 agtttactga tactcctgcc tctggtagca accagtaaac cattgattcc aataatgaag
    25501 acacttttta cggatgttac cggtactgta ccggatgctg aagagatcgc acgtaaagcc
    25561 gagctttttc gccaacaaac gggaattgca ccgtttattg tgattttacc cgacattaat
    25621 aatgaagcca gtctcagaca aaatggtaaa gcgatgctgg cgcatgcgtc atcttcattg
    25681 agtaatgtaa aaggaagtgt tctgttacta tttactaccc gcgaaccacg gttaattatg
    25741 atcaccaacg gccaggttga aagtggtctg gacgataaac atctcggcct tctgatagaa
    25801 aatcacacgc tggcttattt aaatgcagat ctctggtatc agggaatcaa taatgcattg
    25861 gctgttctac aagcacagat attaaaacaa ccgacgccgc cactgacgta ttatccgcat
    25921 ccaggacaac agcatgaaaa tgctcccccc ggcagcacca acacattagg ttttatcgcc
    25981 tgggctgcga cgtttatctt attttcctgg atcttttgct acacgactcg ttttatttat
    26041 gcgttaaaat ttgcagtggc gatgactatt gccaatatgg gttatcaggc tttatgtttg
    26101 tatatcgata atagctttgc gattaccaga atatcgccac tctgggcagg gctaattggt
    26161 gtctgtacgt ttattgccgc attgttattg acgagtaaac gataaaagag gccggaaaag
    26221 tgcgcgtgta ttatgccgga tggggcgcga acgccttatc cggcccacaa aacccgcaaa
    26281 ttcaattaat tgcgtcccct tgtaggcctg ataagcgtag cgcatcaggc aatgcttcct
    26341 gctttataat cccttcagca acttttcaac aaactcaggc accacctggc ttgccgggcc
    26401 gtaatatttc tcggcaaatt cattaccgac ctgacttggt tcgagattca gttccacggt
    26461 gtgcgcgcca tgcagtttcg cttcgtgaac aaacccagcc gccggataaa catgcccgga
    26521 agtaccaatg gcaatgaaaa tatcagccat cgacaacgcc atataaattt catccatgcc
    26581 gagtggcatt tcgccaaacc aaacgacgtg cgggcgcaag ggtgccggga actggcaaca
    26641 atggcattta tcttctggcg taacgtctcc ggtccagtcg agaacctgac cactttgcga
    26701 acaacgaact ttcagcaatt ccccatgcat atgaatgaca ttggtattac ctgcgcgttc
    26761 atgcaggttg tctatattct gcgttaccag caaaaagcga tcgccgaggg cgtcttgcag
    26821 tttagccagc gcaagatgcg cggcgttagg ctgaatttct ggctgctgca gctgtcgacg
    26881 acgggcgtta taaaacgctt gcaccagttc aggatcgcga tcgaaacctt ccggcgttgc
    26941 cacatcttca acccgatgtt cttcccacag gccatctgcg gcgcgaaagg tacgaatacc
    27001 tgattccgca gaaatccctg cccctgtcag tacgagtact cttggttttt ccattgcttc
    27061 cggcaccact ttatctctga aaaaaatacg ctgacgcaaa cgctcgcgca ggcggcgttt
    27121 atttttacga aaacgactta accgatgacc ccgacgcgac agcatagcaa cctctgttgt
    27181 ttaatcggtt agatgtagga aggccgcacc acgcattcct cccgcatcac cgtggcgcgc
    27241 gcgttcaatg cgcggaacac gagctacagg taagagatga cgaggcagcc tgtccgccag
    27301 ttgcgttgtg attgccggga aattcgataa gccaccacca atgacgacca ggtcagggtc
    27361 aacaatggtc aggatatttc ccagacaaac cgctaataaa tccagataac gctcaacgtg
    27421 cgcccttgcc tgctcatcgc cttgatcata aagcgcaata atttcgggag cctgcaacgg
    27481 ttgatgataa tagtgttgat acagccacgc aaaaccgcga ccagacagat aattttcaat
    27541 gcagccatgc tgaccacagc cgcagcggcg taacgggaaa tccaacccca tcatggttaa
    27601 cgcatcaacc ggcagacgca tatggccaaa ctcgccggta atgtagcttt taccggtaat
    27661 cggtttgccg ttgaaaatca gcccgccgcc aacgccggtg ccgagaatca accccatcac
    27721 cagtggatat tgagtaaatt catcatccca ggcttctgaa agggcaaaac agttggcatc
    27781 gttatcaagg cgtacatcgc gatcaagacg tgcgctcagg tcggcacgca gcggtttacc
    27841 gctggcagcg gggacattgg cggcatacag cgtaccatct tctgtttccg gcattcccgg
    27901 aataccgatg ccgacagaac ctttacagcc aaaacgttgg tcagcttcag ctaccagctc
    27961 acacactgca tctaaaaatg cgtcatagct gtcacgcggt gtcggcaccc gcttttccca
    28021 ctgcaactgc cgaccgctat caaacacgcc aagcgcaatt tttgttccac caatatcaaa
    28081 cccgtaatac attgccgctc cttgttttaa tgtactgcct ttactggccg ctaaggactc
    28141 gcgcagggtc aatattactg gcgcgccgcg ccggatacca acttgccaaa agactcagca
    28201 acaatgctgt gaccagtacg tagaagacgt ccagccagtg caattccgat ggcaggaaat
    28261 caataaaata gatatcgctg gagaggaact gatgaccgat caacttttca atccactcaa
    28321 taatcggggt aagttgcagt gaaaccacca caccgataat caccccacac aggctgccga
    28381 acagccctgc cagcaatcca taccagacaa agatggcgcg aattaaacca tctttcgccc
    28441 ccagcgttct taatactgcg atatcgccac tcttgtcttt caccgccatc actaaggtgg
    28501 agacgatgtt gaaacaggcc acgccaatca ccagtaccat cgccagatac ataatggcgc
    28561 ggatcatctg gatatcgcga tacatatagc cgtaagtacc aatccaactt ttaatataaa
    28621 catagctgtt ggtcacttca cccgcatcgc gtaccagctt attggcgttg aaaacatccg
    28681 tcattttaag ggcaatacct gacacgctgg aacccatatc aagatattgt tgggcatccg
    28741 ccagcgggat catggcaaaa ctgtgatcga gttgaccact caactgcaaa ataccggcaa
    28801 cgtgcaaacg cacacgtttt ggctgcatca gtttatgctc gggattcgag ttggggatca
    28861 taatcgacac ccaatccccc agcttcactt tcagcgcatc cgccacgcct ttgccgatga
    28921 taatttgctg ttcgcccgct ttaaaattgc gccacgcatc gccctggaca aacgagggta
    28981 atgcgctcag acgctgttcc tgttgcgggt taacgccctt cacctggatt gcgcgaagat
    29041 tcacgccact ttccaccagc ccggtgaaat tgatatacgg cgcggcagcg gcaatacccg
    29101 gcactttttg cacgtgatcc agtgcttcct gccagttagt ccacggctga tccaccgcct
    29161 cgatttcacc atgcggcacc accgccagaa tacggttgtt cagttcgcgt tcaaagccgt
    29221 tcatcgcgct taagccgacg atcaataccg ccacgccgag ggcaatgcca atggtagaaa
    29281 taacggagat cagcgacacc atgccgccgc gccgccgtcc gcgactaaaa cgcaggccaa
    29341 ttaataacga taaaggcatc gccattactc cgcccccatc aggctcagtt ccgccgtcag
    29401 acgaccatca cgcatttcta actggcggct catacgtttc gccagttgca ggtcgtgagt
    29461 aaccaccagg aaggcggtgc cctgcaagcg attcaattcc ccaagcaact ggaagatgct
    29521 gtcggcgtta cgcgcatcga ggttaccggt aggttcatcc gccagtacca ggcgcgggtt
    29581 attcaccagc gcacgggcaa tcgccacacg ctggcgttcg ccgccagaaa gttcagatgg
    29641 gcggtgattc gcacgatgat ccagccccac cgcttttaac atctcaagtg cacggctgtt
    29701 gatttcagcg ggctttttct tgccaatcag cagcggcata gccacgtttt ccagggcggt
    29761 aaaatccggc agcaggtggt gaaactgata aataaagccc agcttctggt tgcgcagctc
    29821 tgctttcgcc gccgaagaca gtttgctcat cggttgaccg ttaaagatca catcgccgga
    29881 ggttggcgta tccagcccgc ccaacaagtg cagcaaggtg cttttaccgg aaccagagct
    29941 accgacgatc gccatcattt caccttcgcc gacgctgaaa ctgacattgt gcagcacatc
    30001 ggtttgcaca ctgccttcct gatagcgttt gcacaggttg tcgcattgca acaggatctt
    30061 attcataacg taaagcctca gcgggttgag tggcggcagc gcgccatgaa gggtaaagcg
    30121 tagacagcag cgcgatagcc atcgccacca gcgcaataac aatgacctgt aaaggttcga
    30181 tagcgaccgg cagcgccgcg ccatcaagca ggacgccgat tatcggcatc agattattta
    30241 actggctggc aagcagggcg ccaagcgccg ctccgaggat cgcaccgata atcccggcgc
    30301 tggccccttg caccataaag accatcatga tttgtcgcgg agttaagcct tgcgtttgca
    30361 ggatcgctac ttcgccctgc ttctccatta ccatcagccc tagtgaggta ataatgttaa
    30421 acgccgcaac ggcgacaatc aggctcagca gtaaacccat catatttttt tccatgcgta
    30481 cggcctggaa caactcgcct ttacgatcac gccagtcctg ccatttgctg ccttcaggca
    30541 gtttttgctg acttaatgag tcgactttca gcggctcatc cagccacaaa cgccagccgg
    30601 taatattgcc tgccggataa cgcatcagac gcgaggcatc ctcaatattc accagcattt
    30661 catagccatc gacttcactg ttggcggcga aagtgccaat cacattgaac aggcgctggc
    30721 ttggaatacg ccccatcggc gtgaactggc tggcagatgg taccatcacg cgaatttgat
    30781 caccgcgatt aacgcctagc tgtgaggcaa gttgttcgcc gaggatgaca ttatatttcc
    30841 ccggctcgag gtcagtttgt ttcacattga ccagatacgg tgtaagtgga tctttttgcg
    30901 ccgggtcgat accgagcatc accccgaccg ccacgctgcg cgcgctttgc agtaccacat
    30961 caccggtagt aataggtgcg acgcgattaa cgccgtccag tttgactgcc gtttccggga
    31021 gttgctgcgg gttaagagag ccatgctcag aagagagaat tgcctgtggc atcaggccaa
    31081 ggatgttgtt ttgcagctcg cgctcaaagc cgttcatcac tgacaatact gtgaccagcg
    31141 ccatcacccc gagggtaatg ccgatggtag aaagccagga gacgaaacga ccgaagcgat
    31201 ccgctgcacg cccacgcatg taacgcaggc caataaatag agcgacaggt tggtacatga
    31261 aatccgtctg gttgctgtag caaagacacg agtatataag cgaaagcaag atgggtaaac
    31321 gtctgaactg taagtgatcg tcagggctaa tctgaaaagc ccccgtgaat caatcggcta
    31381 aattgccatg ttttatcatc aatcttgccg cctgatctta atctgaaaaa tcatccaata
    31441 cagacagata cccattacac atagggtcat aacccgcagg atcaaccgca tgtaaattaa
    31501 aaaagagcgt gttgtcctga tgaaacaaaa agagctatgg attaaccaga tcaaagggtt
    31561 atgtatttgt ctggtggtga tttatcactc ggtcattacc ttttatccgc atctgaccac
    31621 ttttcagcat ccgttatcgg aagtcctgag caaatgctgg atctatttca atctttacct
    31681 tgcacccttt cgtatgccgg tttttttctt tatttccggc tatttgattc gccgctatat
    31741 cgacagcgta ccgtggggaa attgtctcga taaacgcatc tggagcatct tttgggtgct
    31801 gacgctttgg ggcgtggtgc agtggctggc gttaagtgcg cttaaccagt ggctggcacc
    31861 tgagcgcgat ttaagcaacg cttccaatgc cgcgtatgcc gattccaccg gtgagttcct
    31921 gcacgggatg atcacagcca gcaccagctt gtggtatctg tatgcgttaa ttgtctattt
    31981 cgtggtatgt aaaattttta gccgtctggc gctgccacta ttcgccttgt ttgtactgct
    32041 gagtgtggcg gttaatttcg ttcccacgcc gtggtgggga atgaacagtg tgatccgcaa
    32101 tttgccttat tacagccttg gcgcatggtt tggcgcaaca ttaatgacct gtgttaaaga
    32161 ggtgccgttg cgccgccatc tgctgatggc ttctttgctt accgttctgg cggtcggtgc
    32221 ctggttgttt actatctcgc tgctgttgtc gctggtatcg attgtggtga tcatgaagct
    32281 gttttatcaa tacgagcaac aattcggtat gcgctccacc agcctgctga atgtgattgg
    32341 ctccaacacc attgctatct acaccaccca tcgcattctg gttgaaatat tcagcttaac
    32401 tctgcttgcg caaatgaacg cagcacgctg gtcgccgcaa gtcgaactga cactcctgct
    32461 gggttacccc tttgttagtt tgttcatctg tactgttgcg ggcttgctgg taagaaaact
    32521 ttcacagcgc gcattcagcg atctgttgtt ctccccgcct tctctgcccg cggccatcag
    32581 ttactcccgc taagccatcg ccccagccgg ggcgattcaa tttgctaaac catgtcgatt
    32641 acggataatg aacagcattg cttatcagag atatgccccc atatgttgag gcatatccta
    32701 acgagaatct gacaaccgtt atgcctgaac aatatcgtta tacgctgccc gtcaaagcgg
    32761 gtgagcagcg tctgctgggc gagttaaccg gcgctgcctg cgcgacgctg gtagcggaaa
    32821 ttgccgaacg tcacgccggt ccggtggtac tcattgcacc agatatgcaa aatgctctgc
    32881 gtttgcatga tgaaatcagc cagtttaccg atcaaatggt gatgaatctg gcggactggg
    32941 aaactcttcc ctacgacagt ttttcgcctc atcaggacat tatctcctcg cgcctttcca
    33001 ccctttacca gctaccgacg atgcagcgtg gcgtactgat tgttccggtg aatacgctta
    33061 tgcagcgcgt ttgcccgcac agttttcttc acggccatgc gctggtgatg aaaaaaggtc
    33121 agcgtctgtc acgagatgca ttaagaaccc aactggacag cgccggttat cgccatgttg
    33181 accaggtaat ggagcacggc gaatacgcca cgcgcggcgc gttgctggat ctcttcccga
    33241 tggggagtga gctgccttat cgtcttgatt tctttgatga tgaaatcgac agcctgcggg
    33301 tgtttgacgt cgacagccag cgcacgctgg aggaagtaga agcgatcaat ctgctgcccg
    33361 cgcacgaatt tccgaccgat aaagcggcaa ttgaactgtt ccgcagccag tggcgcgata
    33421 ccttcgaagt gaagcgcgat ccggaacata tttaccagca agtgagtaaa ggcacattac
    33481 ctgccgggat cgagtactgg cagccattgt tcttcagcga accactgccg ccgctgttca
    33541 gttatttccc tgccaatacc ttgctggtga atactggcga tctggaaacc agtgccgaac
    33601 gtttccaggc tgacacgctg gcgcgttttg agaatcgcgg cgtcgatccg atgcgcccgc
    33661 tgttgccacc acaatcgctc tggctgcggg tggacgagct cttctcagag ctgaaaaact
    33721 ggccccgggt gcagctaaaa actgaacatt taccgacaaa agccgcgaat gccaatttag
    33781 gtttccagaa actgccagac ctggccgttc aggcacaaca aaaagcgccg ctggatgcgc
    33841 tgcgtaagtt cctcgagact ttcgacggtc cggtggtgtt ctcggtagaa agtgaaggtc
    33901 gccgtgaagc gctgggtgaa ctgctcgcac gaattaaaat tgctccgcaa cgcattatgc
    33961 gtcttgatga agccagcgac cgtgggcgtt atctgatgat tggcgctgcc gaacatggtt
    34021 ttgtcgataa ggtgcgtaat ctggcgctga tctgcgaaag cgatctgctc ggtgaacgtg
    34081 ttgcccgccg tcgtcaggat tctcgccgca ccatcaaccc cgatacactg atccgtaacc
    34141 ttgcggagct gcatattggt cagccggtgg tccatctgga gcacggtgtc gggcgctatg
    34201 ccggaatgac cacgctcgaa gcgggcggca ttactggcga gtatttgatg ctcacctatg
    34261 ccaacgacgc caaactgtat gttccggtgt cgtcactgca tctgattagc cgttacgcag
    34321 gtggcgcgga agaaaacgcc ccgctgcata aacttggcgg cgatgcgtgg tcacgcgcgc
    34381 ggcagaaagc ggcggaaaaa gtgcgtgatg tggcggcgga attgctggat atctacgcgc
    34441 aacgcgccgc caaagagggc ttcgcgttta aacacgatcg tgagcagtat cagttgttct
    34501 gcgacagctt cccgtttgaa accacgccgg atcaggcgca ggccattaat gcggtactta
    34561 gcgacatgtg tcagccgctg gcaatggatc gtctggtgtg cggcgatgtt ggctttggta
    34621 aaacagaagt ggcgatgcgc gccgctttcc tggcagtaga taaccacaag caggtggcgg
    34681 tgttggtgcc taccaccctt ctcgcgcagc agcattacga caacttccgc gaccgtttcg
    34741 ccaactggcc ggtacgtatc gaaatgatct cccgtttccg cagcgccaaa gagcagacgc
    34801 aaatccttgc ggaagtggcg gaagggaaaa tcgatattct gatcggtacg cacaaactgc
    34861 tgcaaagtga cgtcaagttt aaagatttag gcctgctgat tgtcgatgaa gaacaccgct
    34921 tcggggtgcg tcataaagag cgcattaaag cgatgcgcgc gaacgtggat attctgacgc
    34981 ttactgcaac gccgatccca cgcacgctga atatggcaat gagcggaatg cgtgacctgt
    35041 cgattatcgc cacgccgccc gcccgtcgtc tggcagttaa aacctttgtc cgtgagtatg
    35101 acagcctggt ggtccgggag gcgatcctgc gtgaaatttt gcgcgggggg caggtttatt
    35161 atctctacaa tgatgtggaa aacatccaga aagctgccga acggctggca gaactggtgc
    35221 ctgaagcacg gattgccatc ggtcacgggc agatgcgcga gcgcgaactg gaacgggtga
    35281 tgaatgattt ccatcatcaa cgtttcaacg tgctggtttg taccaccatt atcgaaaccg
    35341 ggatcgacat cccgacagcc aacaccatta tcattgaacg tgcggatcac ttcggtctgg
    35401 cgcagctgca ccagttacgc ggtcgcgtcg gacgttcgca tcatcaggca tatgcatggt
    35461 tgctgacgcc gcatccaaaa gcgatgacta ccgatgcaca aaaacgtctt gaagcgattg
    35521 cctcgctgga agatctcggg gcaggttttg cgctggcaac gcacgatctg gagattcgcg
    35581 gcgcgggtga actgcttggc gaagaacaaa gcggctcaat ggaaaccatc ggtttctcgc
    35641 tgtatatgga gttgctggaa aacgccgtcg atgcactgaa agccggacgc gagccgtcgc
    35701 tggaagatct caccagccag caaacagaag tcgagctgcg gatgccgtcg ctattgccag
    35761 atgatttcat tcctgacgtg aatacgcgtt tgtcgttcta taaacgtatt gccagcgcca
    35821 aaacggaaaa cgaactggaa gagatcaaag tcgagcttat cgatcgcttc ggcctgctgc
    35881 cggatccggc gcgtaccctg ctggatgttg cccgtctgcg ccagcaagcg cagaaactgg
    35941 ggatcaggaa gctggaaggt aatgagaaag gcggggtgat cgaatttgcc gagaagaatc
    36001 acgttaatcc ggcctggttg attggtttgc tgcaaaaaca gccgcagcat taccgccttg
    36061 atggtccgac gcgcctgaaa tttattcagg atttgagtga gcggaaaacg cgtatcgaat
    36121 gggtacgcca gtttatgcgt gaactggaag agaacgcgat cgcttaatgg taaatcgggg
    36181 gcgtttctgc gcccccatct gcaacattta caaattcttt gcacttccct gcactatccg
    36241 acactgtcac catccataat tcaggcttat ctgtttatta caataacctt atatttatta
    36301 tggatttttg gtgatgatca aaacgcgttt ttctcgctgg ctaacgtttt ttacgttcgc
    36361 cgctgccgtg gcgctggcgc taccggcaaa agccaacacc tggccgctgc cgccagcggg
    36421 cagtcgtctg gttggcgaaa acaaatttca tgtggtggaa aatgacggtg gttctctgga
    36481 agccatcgcc aaaaaatata acgtcggctt tctcgctctg ttacaggcta accccggcgt
    36541 tgatccttac gtaccgcgcg cgggcagcgt gttaacgatc ccgttgcaaa ccctacttcc
    36601 agacgcgccg cgcgaaggca ttgtgatcaa cattgcggag ctgcgtctct attactaccc
    36661 gccgggtaaa aattcggtaa ccgtgtatcc aataggtatt ggtcagttag gtggtgacac
    36721 gctgacaccg acaatggtga ccaccgtttc agacaaacgt gcaaacccaa cctggacgcc
    36781 aacggcaaac atccgcgccc gttataaagc acagggaatt gagttgcctg cggtagtgcc
    36841 ggctggaccg gataacccaa tgggccatca tgcgattcgt ctggcggcct atggcggcgt
    36901 ttatttgctt cacggtacga acgccgattt cggcattggc atgcgggtaa gttctggctg
    36961 tattcgtctg cgggatgacg atatcaaaac actctttagc caggtcaccc caggcaccaa
    37021 agtgaatatc atcaacactc cgataaaagt ctctgccgaa ccaaacggtg cgcgtctggt
    37081 tgaagtacat cagccgctgt cagagaagat tgatgacgat ccgcagctgc tgccaattac
    37141 gctgaatagc gcaatgcaat catttaaaga tgcagcacaa actgacgctg aagtgatgca
    37201 acatgtgatg gatgtccgtt ccgggatgcc ggtggatgtc cgccgtcatc aagtgagccc
    37261 acaaactctg taaatcctgg ataaaaaaaa tccccgcgac acggcatgtc gcggggaaaa
    37321 aatcagcagt agcaggcatt aatgagggtt aatgcttatt tataaattac tgctgttcca
    37381 tggagggtat tcggaccggt tacagaagta atacggaaag attttgcgcc catctcatcc
    37441 gctttttgcg ccagctgctc ttccagcgat cccagatttg tccccgcgtt agcactgatt
    37501 gtaccgactt tttgttggcc ttctggcgtt gactgaactt cgacagccgc aaagctggca
    37561 aatgacatgg agcttaaaat cgccgcagcg atgagggttt ttacgttttt cataatagtg
    37621 gccttatgca gatgaatgac gtcgcaagca attacttaac gatcgataac taaatgatag
    37681 atgtga
//
LOCUS       DAPGWB010000027        36207 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.027, whole genome shotgun sequence.
ACCESSION   DAPGWB010000027 DAPGWB010000000
VERSION     DAPGWB010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 36207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36207
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.027"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            213..1586
                     /gene="aroP"
                     /locus_tag="RHX79_001363"
     CDS             213..1586
                     /gene="aroP"
                     /locus_tag="RHX79_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter AroP"
                     /protein_id="HDV2196557.1"
                     /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA
                     GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL
                     YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK
                     VIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE
                     LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF
                     HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV
                     NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG
                     VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT
                     AKAVKAH"
     gene            complement(1629..2483)
                     /gene="ampE"
                     /locus_tag="RHX79_001364"
     CDS             complement(1629..2483)
                     /gene="ampE"
                     /locus_tag="RHX79_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase regulator AmpE"
                     /protein_id="HDV2196558.1"
                     /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL
                     GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND
                     SHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPV
                     TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL
                     PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL
                     LTIYGALV"
     gene            complement(2480..3031)
                     /gene="ampD"
                     /locus_tag="RHX79_001365"
     CDS             complement(2480..3031)
                     /gene="ampD"
                     /locus_tag="RHX79_001365"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HDV2196559.1"
                     /translation="MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG
                     GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY
                     QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPD
                     RKTDPGPAFDWARFRVLVSKETT"
     gene            3119..4012
                     /gene="nadC"
                     /locus_tag="RHX79_001366"
     CDS             3119..4012
                     /gene="nadC"
                     /locus_tag="RHX79_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HDV2196560.1"
                     /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND
                     ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ
                     SLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLR
                     SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN
                     LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD
                     FISVGALTKHVQALDLSMRFR"
     gene            4215..4655
                     /gene="ppdD"
                     /locus_tag="RHX79_001367"
     CDS             4215..4655
                     /gene="ppdD"
                     /locus_tag="RHX79_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HDV2196561.1"
                     /translation="MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ
                     TFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTHYVSAMSVAKGVVSLTGQESLNG
                     LSVVMTPGWDNANGVTGWTRNCNIQSDSALHQACEDVFRFDDAN"
     gene            4665..6050
                     /gene="gspE"
                     /locus_tag="RHX79_001368"
     CDS             4665..6050
                     /gene="gspE"
                     /locus_tag="RHX79_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
                     /protein_id="HDV2196562.1"
                     /translation="MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFA
                     TTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHI
                     EPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVEL
                     AGNAVSFRIATLPCRGGEKVVLRLLQQVSQALDVNTLGMQPLQLADFAHALQQPQGLV
                     LVTGPTGSGKTVTLYSALQTLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGV
                     LRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVA
                     RWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGF
                     YGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEE
                     LIRVLGMPHGE"
     gene            6040..7242
                     /gene="hofC"
                     /locus_tag="RHX79_001369"
     CDS             6040..7242
                     /gene="hofC"
                     /locus_tag="RHX79_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein transport protein HofC"
                     /protein_id="HDV2196563.1"
                     /translation="MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLS
                     LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAH
                     DLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVK
                     SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWSW
                     LLVLFGFLLAIANKLLMRRPTWLIVRQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA
                     GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGHPIWLALKNTGEFSPLCLQLVRTG
                     EASGSLDLMLDNLAHHHRDNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL
                     GDAMSGMG"
     gene            complement(7277..8320)
                     /gene="guaC"
                     /locus_tag="RHX79_001370"
     CDS             complement(7277..8320)
                     /gene="guaC"
                     /locus_tag="RHX79_001370"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008461816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HDV2196564.1"
                     /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSW
                     SGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVS
                     TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV
                     TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS
                     DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK
                     RHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFI
                     RVQEQENRIFNNL"
     gene            complement(8476..8520)
                     /locus_tag="RHX79_001371"
     CDS             complement(8476..8520)
                     /locus_tag="RHX79_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196565.1"
                     /translation="MIIKTLKMSARKRN"
     gene            8545..9165
                     /gene="coaE"
                     /locus_tag="RHX79_001372"
     CDS             8545..9165
                     /gene="coaE"
                     /locus_tag="RHX79_001372"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDV2196566.1"
                     /translation="MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA
                     PALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNDLLHPLIQQETQHQIQQ
                     ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA
                     TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP"
     gene            9165..9908
                     /gene="zapD"
                     /locus_tag="RHX79_001373"
     CDS             9165..9908
                     /gene="zapD"
                     /locus_tag="RHX79_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapD"
                     /protein_id="HDV2196567.1"
                     /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF
                     RNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVL
                     ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS
                     LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH
                     KSRFAIRFMPLDTENGQVPERLDFELACC"
     gene            9918..10115
                     /gene="yacG"
                     /locus_tag="RHX79_001374"
     CDS             9918..10115
                     /gene="yacG"
                     /locus_tag="RHX79_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HDV2196568.1"
                     /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE
                     KRIPSSGDLSESDDWSEEPKQ"
     gene            complement(10215..10604)
                     /gene="mutT"
                     /locus_tag="RHX79_001375"
     CDS             complement(10215..10604)
                     /gene="mutT"
                     /locus_tag="RHX79_001375"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HDV2196569.1"
                     /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE
                     TPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVESWEGEPWGKEGQPG
                     EWMSLVGLNADDFPPANEPVIAKLKRL"
     gene            complement(10664..13369)
                     /gene="secA"
                     /locus_tag="RHX79_001376"
     CDS             complement(10664..13369)
                     /gene="secA"
                     /locus_tag="RHX79_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDV2196570.1"
                     /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK
                     GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM
                     RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG
                     MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE
                     ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE
                     RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI
                     IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG
                     TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ
                     PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG
                     RGTDIVLGGSWQAEVAALENPTVEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT
                     KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED
                     VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERIL
                     AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD
                     PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ
                     LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ"
     gene            complement(13431..13943)
                     /gene="secM"
                     /locus_tag="RHX79_001377"
     CDS             complement(13431..13943)
                     /gene="secM"
                     /locus_tag="RHX79_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414639.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secA regulator SecM"
                     /protein_id="HDV2196571.1"
                     /translation="MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPA
                     KATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTL
                     PVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQ
                     GIRAGPQRLT"
     gene            complement(14173..15090)
                     /gene="lpxC"
                     /locus_tag="RHX79_001378"
     CDS             complement(14173..15090)
                     /gene="lpxC"
                     /locus_tag="RHX79_001378"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDV2196572.1"
                     /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL
                     NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP
                     IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID
                     FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV
                     DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVL
                     AKQEAWEYVTFQDDAELPLAFKAPSAVLA"
     gene            complement(15191..16342)
                     /gene="ftsZ"
                     /locus_tag="RHX79_001379"
     CDS             complement(15191..16342)
                     /gene="ftsZ"
                     /locus_tag="RHX79_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDV2196573.1"
                     /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT
                     DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA
                     GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL
                     ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS
                     EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE
                     TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP
                     VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD"
     gene            complement(16403..17665)
                     /gene="ftsA"
                     /locus_tag="RHX79_001380"
     CDS             complement(16403..17665)
                     /gene="ftsA"
                     /locus_tag="RHX79_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDV2196574.1"
                     /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR
                     GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE
                     EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL
                     ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI
                     AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE
                     VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL
                     TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN
                     GEAEVEKRVTASVGSWIKRLNSWLRKEF"
     gene            complement(17662..18492)
                     /gene="ftsQ"
                     /locus_tag="RHX79_001381"
     CDS             complement(17662..18492)
                     /gene="ftsQ"
                     /locus_tag="RHX79_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HDV2196575.1"
                     /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV
                     VLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR
                     LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPML
                     YGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMK
                     RLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ
                     "
     gene            complement(18494..19414)
                     /gene="ddlB"
                     /locus_tag="RHX79_001382"
     CDS             complement(18494..19414)
                     /gene="ddlB"
                     /locus_tag="RHX79_001382"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDV2196576.1"
                     /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE
                     VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKL
                     LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE
                     NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS
                     DETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG
                     MTSHSLVPMAARQAGMSFSQLVVRILELAD"
     gene            complement(19407..20882)
                     /gene="murC"
                     /locus_tag="RHX79_001383"
     CDS             complement(19407..20882)
                     /gene="murC"
                     /locus_tag="RHX79_001383"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDV2196577.1"
                     /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY
                     QISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR
                     IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG
                     VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL
                     HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFNEDADVRVEDYQQIGPQGHFTLLR
                     QDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEF
                     PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD
                     DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEML
                     APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD"
     gene            complement(20936..22003)
                     /gene="murG"
                     /locus_tag="RHX79_001384"
     CDS             complement(20936..22003)
                     /gene="murG"
                     /locus_tag="RHX79_001384"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDV2196578.1"
                     /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR
                     MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM
                     GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN
                     PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS
                     GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA
                     LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR
                     AASIPDATERVANEVSRAARA"
     gene            complement(22000..23244)
                     /gene="ftsW"
                     /locus_tag="RHX79_001385"
     CDS             complement(22000..23244)
                     /gene="ftsW"
                     /locus_tag="RHX79_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HDV2196579.1"
                     /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY
                     DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL
                     PMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYI
                     ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAK
                     LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL
                     WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL
                     EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM
                     MLLRIDYETRLEKAQAFVRGSR"
     gene            complement(23244..24560)
                     /gene="murD"
                     /locus_tag="RHX79_001386"
     CDS             complement(23244..24560)
                     /gene="murD"
                     /locus_tag="RHX79_001386"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDV2196580.1"
                     /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL
                     DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE
                     AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELS
                     SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT
                     MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA
                     LALADAAGLPRASSLKALTTFAGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL
                     QVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME
                     QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG"
     gene            complement(24563..25645)
                     /gene="mraY"
                     /locus_tag="RHX79_001387"
     CDS             complement(24563..25645)
                     /gene="mraY"
                     /locus_tag="RHX79_001387"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDV2196581.1"
                     /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM
                     IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL
                     VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL
                     VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA
                     TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA
                     LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP
                     EPRVIVRFWIISLMLVLIGLATLKVR"
     gene            complement(25639..26997)
                     /gene="murF"
                     /locus_tag="RHX79_001388"
     CDS             complement(25639..26997)
                     /gene="murF"
                     /locus_tag="RHX79_001388"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDV2196582.1"
                     /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK
                     GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARV
                     VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG
                     ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN
                     ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLP
                     LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN
                     ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGK
                     QSHAISTASGVGEHFADKTALITRLKSLIAEQQVITILVKGSRSAAMEEVVRALQENG
                     TC"
     gene            complement(26994..28481)
                     /gene="murE"
                     /locus_tag="RHX79_001389"
     CDS             complement(26994..28481)
                     /gene="murE"
                     /locus_tag="RHX79_001389"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDV2196583.1"
                     /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH
                     QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY
                     HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG
                     SAVDVQHELAGLVEQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM
                     EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKA
                     IDVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLALATLLALGYPLADLLKTAA
                     RLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK
                     GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC
                     AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA"
     gene            complement(28468..30234)
                     /gene="ftsI"
                     /locus_tag="RHX79_001390"
     CDS             complement(28468..30234)
                     /gene="ftsI"
                     /locus_tag="RHX79_001390"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000642204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase FtsI"
                     /protein_id="HDV2196584.1"
                     /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW
                     LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG
                     GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH
                     LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI
                     EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA
                     NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY
                     RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG
                     LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD
                     PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI
                     NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD
                     ALTTGDKNEFVINQGEGTGGRS"
     gene            complement(30250..30615)
                     /gene="ftsL"
                     /locus_tag="RHX79_001391"
     CDS             complement(30250..30615)
                     /gene="ftsL"
                     /locus_tag="RHX79_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HDV2196585.1"
                     /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI
                     CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT
                     EKLQMQHVDPSQENIVVQK"
     gene            complement(30612..31553)
                     /gene="rsmH"
                     /locus_tag="RHX79_001392"
     CDS             complement(30612..31553)
                     /gene="rsmH"
                     /locus_tag="RHX79_001392"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDV2196586.1"
                     /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ
                     LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL
                     GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERF
                     AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE
                     IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL
                     GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA"
     gene            complement(31555..32013)
                     /gene="mraZ"
                     /locus_tag="RHX79_001393"
     CDS             complement(31555..32013)
                     /gene="mraZ"
                     /locus_tag="RHX79_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020325403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HDV2196587.1"
                     /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPC
                     LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA
                     GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL"
     gene            complement(32615..33619)
                     /gene="cra"
                     /locus_tag="RHX79_001394"
     CDS             complement(32615..33619)
                     /gene="cra"
                     /locus_tag="RHX79_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite repressor/activator"
                     /protein_id="HDV2196588.1"
                     /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE
                     HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ
                     PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVV
                     GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN
                     SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN
                     ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS
                     "
     gene            complement(33701..33787)
                     /locus_tag="RHX79_001395"
     CDS             complement(33701..33787)
                     /locus_tag="RHX79_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fruR/shl operon leader peptide"
                     /protein_id="HDV2196589.1"
                     /translation="MRNLQPNMSRWAFFAKSVGTWNKSSCRS"
     gene            complement(33799..34290)
                     /gene="ilvN"
                     /locus_tag="RHX79_001396"
     CDS             complement(33799..34290)
                     /gene="ilvN"
                     /locus_tag="RHX79_001396"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001563086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDV2196590.1"
                     /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS
                     RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK
                     RNTEIFRGQIIDVTPSLYTVQLAGTSDKLDAFLASIRDVAKIVEVARSGVVGLSRGDK
                     IMR"
     gene            complement(34293..36017)
                     /gene="ilvI"
                     /locus_tag="RHX79_001397"
     CDS             complement(34293..36017)
                     /gene="ilvI"
                     /locus_tag="RHX79_001397"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020079613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HDV2196591.1"
                     /translation="MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGID
                     HVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQ
                     VATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVD
                     LPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAI
                     MAGCHQQLKETVEALNLPVVSSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVI
                     FAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADIPIVGDARQVLEQMLEL
                     LSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVT
                     SDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGS
                     IQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLA
                     EAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEM
                     WLSKTERT"
     gene            36136..36180
                     /locus_tag="RHX79_001398"
     CDS             36136..36180
                     /locus_tag="RHX79_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196592.1"
                     /translation="MKRNDKILHYEGLN"
BASE COUNT         8636 a        10165 c         8911 g         8495 t
ORIGIN      
        1 tttacaaacg gtttcttttt aagcaactca tcttcaacca tgcataaagc gggtgcattc
       61 gctgccgcat accattattc ttgatcttac ggaagtcttt ttgtaacaat tcaaacttct
      121 ttgatgtaaa caaattaata caacaaacgg aattgcaaac ttacacacgc atcactgcgt
      181 agatcaaaaa aacaatcacc gcacgaggtt tcatgatgga aggtcaacag cacggcgagc
      241 agctaaagcg cggccttaaa aaccgccata ttcagcttat cgcgctgggt ggcgcgatag
      301 ggacagggct attcctgggt agcgcctccg taatacagtc cgcagggcca gggattatcc
      361 tgggttacgc cattgctggt tttatcgcct ttctgatcat gcgtcagctg ggtgaaatgg
      421 tggtcgaaga acctgtcgca ggctccttta gccactttgc ttataaatac tggggcagtt
      481 ttgccggttt cgcctctggc tggaactact gggtactgta cgttttagtt gccatggctg
      541 agctgactgc cgtgggtaaa tacattcagt tctggtatcc ggaaatcccc acctgggttt
      601 ctgccgccgt attctttgtg gtgattaacg ccatcaacct gaccaacgtt aaagtgtttg
      661 gcgagatgga gttctggttt gccattatca aagttatcgc ggtggtagcg atgatcatct
      721 tcggcggctg gctgctattc agtggcaacg gcggcccgca ggcgaccgtt agcaacctgt
      781 gggatcaggg tggtttcctg ccgcacggct tcaccgggct ggtgatgatg atggcgatta
      841 tcatgttctc gttcggtggt ctggaactgg tggggatcac cgcagcagaa gctgataacc
      901 cggagcaaag tataccgaaa gcaactaacc aggttatcta ccgcatcctg attttctata
      961 ttggttcgtt agccgttctg ctctcactga tgccgtggac ccgcgttacc gccgatacca
     1021 gtccgtttgt gctgatcttc cacgagttag gcgatacctt tgtggcgaat gcgctgaaca
     1081 tcgtggtact gactgcggcg ctctccgtgt acaacagctg cgtatattgc aacagccgta
     1141 tgctgtttgg tctggcacaa cagggtaatg cgccaaaagc gctggcgtct gtcgataaac
     1201 gtggtgtacc agtaaatacc attctggtgt ctgcactggt aacggcgttg tgcgtactga
     1261 ttaactacct tgccccagag tccgctttcg gactgttaat ggcgctggtg gtatctgcac
     1321 tggtaatcaa ctgggcgatg attagcctgg cgcatatgaa attccgtcgc gccaagcagg
     1381 aacaaggcgt ggtaactcgc ttccctgctc tgctttatcc gctgggtaac tggatctgcc
     1441 tgctgtttat ggcggcggta ctggtgatta tgctgatgac cccaggaatg gcgatttcgg
     1501 tatacctgat cccggtatgg ctgatcgtgt taggtatcgg ctatctgttt aaagagaaaa
     1561 ccgccaaagc cgtaaaagcg cattaatctc tctacgccct cacccgtaca gggtgagggc
     1621 aataatcttt acaccaacgc cccgtaaatc gtcagtagtg caatcaccac cacgaccacg
     1681 aacgaggttt tcttcgccat tgaaaccgct gccttcggcg tctccacctt atcgacatgc
     1741 ggttcacgcg ccagagagaa ctgcgccaga cgcgttaaca cctgatactg cgaagtatgg
     1801 aaatcaccca gcgaagcaaa ccaggccggt aacgctttct caccatgacc gatcaaggca
     1861 tataccacac ccgcaagacg aaccggcacc caatccagta catgaagcac ggcatcaatg
     1921 ccggactgta aacgatgatg cggcgtctga tatcgcgcca gccagtattg ccatgcacgc
     1981 aaaaacgcat accccatcag cgtaacgggt ccccaggttc cccccacaat cagccagaac
     2041 agcggtgcaa gataaaaacg aaagttaatc cacagcaatg cattttgcag ctcacgcaaa
     2101 tactcacgtt cgtcgcagcc tgccgggacg ccgtgaatca tggtgagttc gccagccatc
     2161 gtggcacggg catggctatc attacgtgaa gcagctgtca gataagcatg ataatgaaga
     2221 cgaactttac ctgcgccaat acacagcaaa ccaatcagca gccacaccag tagcgtggga
     2281 acgttgaaca atactccctg caatgcgcgt aacagtaaaa aagtcacgcc catcgcaata
     2341 atggtcatgc ctaacgtgcg cccgagagaa aaatgtttca cccgccgaaa gaacgcttca
     2401 agacgatgat caagctgcca gtgctcgccc aacttaaaca ggcgctcgaa aattaacacc
     2461 agtaaggttg taaatagcgt catgttgtct ccttgctgac cagcacacga aaccgtgccc
     2521 aatcaaatgc aggaccggga tcggttttcc gatccggcgc aatatcacaa tggcccgtca
     2581 tgtttttagc gatatccgga tagcaatcaa tcagtgcccg cgtaaccgcc gcaagctgtt
     2641 gatactgcgc atcggtatac gccagcgtat cggtgccttc aagctcaatc ccaatagaaa
     2701 aatcattgca gcgttcgcgc ccctgatact gagagactcc cgcatgccat gcacgtttat
     2761 cgaaaggaac atactggact atttcaccat cacggcgaat caaacagtga gcggagacgc
     2821 gcaaatgggc gatctcagca aagaaaggat gtgcctgcgg atcaatagtt ccagtgaata
     2881 atgcgtcgat ccacggaccg ccaaactcgc ctggcggcag gctaatattg tgcaccacca
     2941 gcagggtggg tgtttcgtca tccgggcggc aatcgtaatg tggtgaggga acgcggcgcg
     3001 cgccaaccag ccacccctgt tctaacaaca tgcaggatct ccttatatgt ggtgctaata
     3061 cccggttcag agtagcatgt ttctacctta tgattcgtta gctatctgga gttttaacat
     3121 gccgcctcgc cgctataacc ctgacacccg acgtgacgag ctgctggaac gcattaatct
     3181 cgatatcccc ggcgcggtgg cccaggcgct gcgggaagat ttaggcggaa cagtcgatgc
     3241 caacaatgat attacggcaa aacttttacc ggaaaattct cgctctcatg ccacggtgat
     3301 cacccgcgag aatggcgtct tttgcggcaa acgctgggtt gaagaggtgt ttattcaact
     3361 ggcaggcgac gatgtcacca taatctggca tgtggatgac ggcgatgtca tcaatgccaa
     3421 tcaatccttg ttcgaacttg aaggcccatc ccgcgtgctg ttaacgggcg aacgcactgc
     3481 gcttaatttt gtgcaaaccc tttcaggagt tgccagtaag gtacgccact atgtcgaatt
     3541 gctggaaggc accaacacgc agttgttgga tacgcgcaaa accttacccg gcctgcgttc
     3601 agctctgaaa tacgcggtac tttgcggcgg cggagcgaat caccgtctgg ggctttctga
     3661 tgccttcctg atcaaagaaa accatattat tgcctccggc tcagtgcgcc aggcggtcga
     3721 aaaagcgtcc tggctgcacc cggatgcgcc agtagaagtc gaagtagaga atctggaaga
     3781 acttgatgaa gccctgaaag caggagccga tatcatcatg ctggataact tcgaaacaga
     3841 acagatgcgc gaagccgtca aacgcaccaa cggcaaggcg ctactggaag tgtctggcaa
     3901 cgtcactgac aaaacactgc gtgaatttgc cgaaacgggc gtggacttta tctccgtcgg
     3961 tgcgctaact aaacacgtac aagcactcga cctttcaatg cgttttcgct aatagttgac
     4021 agatttatcc gctccatcgc gggcggataa tctccccttc cccaactttc ttcgtaacgc
     4081 ctcgcaaatt tcttgtcttt cgctgcaacg aaataaaaaa cctcggaatc tgctttcccg
     4141 tttcgttttt tgcccctcgc ctgtgctgat ggcgtttgcc aaagtagcgc caactaaatc
     4201 aaggagcgaa acagatggac aagcaacgcg gttttacact tatcgaactg atggtggtta
     4261 ttggcatcat tgccatttta agcgccattg gtattcccgc ttatcaaaac tacctgcgca
     4321 aagccgcact caccgacatg ctacaaacct ttgtgcctta ccgtaccgcc gtagagttgt
     4381 gcgcgctgga acatggtgga ttagatacct gcgacggtgg cagcaatggc attccctcgc
     4441 ctaccaccac ccactatgtt tcagccatga gtgtggcaaa aggcgtggtg tcgctgaccg
     4501 ggcaagaaag tctcaatgga ctaagcgtcg tcatgacacc gggttgggat aacgcaaacg
     4561 gcgtcaccgg ctggacgcgc aactgcaata ttcaaagtga cagcgcattg catcaagcct
     4621 gcgaagatgt cttccgcttt gatgacgcca actaaggagc ggcaatgaat attccacagc
     4681 tcactgccct gtgtctgcgt tatcatggag tcttgctgga tgccagcgaa gaggtggttc
     4741 atgttgcggt agtcgatgca ccttcgcatg agctactgga cgcattgcat ttcgctacca
     4801 ccaaacgtat tgagatcacc tgctggacgc gccaacaaat ggaaggtcac gccagtcgca
     4861 cacaacagac attgcccgta gctgttcagg agaagcatca gcccaaagca gagttgctaa
     4921 ctcgaacgtt acaatctgcg ctggaacaac gcgcgtctga tattcatatc gaaccagcgg
     4981 acaatgccta ccgcatccgc ttgcgtatcg acggcgtatt gcatccttta ccggatgttt
     5041 caccggatgc cggagtcgca ttaaccgcca gattaaaagt gctgggaaac ctggatattg
     5101 cggaacatcg cctgccgcag gacgggcaat tcactgtcga actggcagga aacgccgtct
     5161 catttcgtat tgcgacctta ccatgtcggg gtggtgaaaa ggtggtatta aggttgttac
     5221 agcaggtgag ccaggcactg gatgtcaaca cgcttggaat gcagccgtta caactggcgg
     5281 actttgctca tgccttgcaa caaccacagg gactggtgct ggtaactggc cctacaggca
     5341 gcggcaaaac ggtcacgctt tatagtgccc tgcaaacgct gaataccgct gacattaata
     5401 tttgtagcgt cgaagatccg gttgagatcc ccatagccgg actaaaccag acgcaaatcc
     5461 atccgcgtgc cggactcacc tttcagggcg tgttgcgtgc gttattgcgc caggatcctg
     5521 acgtcatcat gatcggagag atccgcgatg gcgaaacagc agagatcgct attaaagcgg
     5581 cgcaaactgg tcacctggtg ttgtctaccc tacacactaa ttccacctgc gaaacgctgg
     5641 tacgtttaca gcaaatgggg gtcgcccgct ggatgctatc atcggcgctt acgctggtaa
     5701 tagcccagcg tctggtacgc aaactttgcc cacattgtcg ccggcagcaa ggggagccca
     5761 tccacattcc agacaatgta tggccatcgc cgctgcccca ctggcaggca cccggttgtg
     5821 tacattgcta ccacggtttt tatggtcgta cggccttatt tgaagttctg cccataacgc
     5881 cggtcattcg tcagcttatt tccgctaata ccgacgttga atcgctggaa acgcacgcac
     5941 gacaggcggg tatgcgtacg ctttttgaaa acggctgcct ggccgtggag caaggcttaa
     6001 ccacctttga agagttaatc cgcgtactgg ggatgccgca tggcgagtaa gcaactctgg
     6061 cgctggcatg gcataaccgg cgacggcaat gcgcaagatg ggatgctatg ggcagagagc
     6121 cgtgctttgc tgctcatggc actacagcaa cagatggtta ccccacttag cctgaagcga
     6181 atcgccatca attctgcgca gtggcgagga gataaaagcg cggaagtcat tcatcaactg
     6241 gcgacgctac tcaaagccgg gttaacgctt tctgaagggc tggcactgct ggcggaacag
     6301 catcccagta agcaatggca agcgttgctg caatcgctgg cgcacgatct cgaacagggc
     6361 attgcttttt ccaatgcctt attaccctgg tcagaggtat ttccgccact ctatcaggca
     6421 atgatccgca cgggtgaact gaccggtaag ctggatgaat gctgctttga actggcgcgt
     6481 cagcaaaaag cccagcgtca gttgaccgac aaagtgaaat cagcgttacg ttatcccatc
     6541 atcattttag cgatggcaat catggtggtt gtggcaatgc tgcattttgt tctgccggag
     6601 tttgccgcta tctataagac cttcaacacc ccactaccgg cactaacgca ggggatcatg
     6661 acgctggcag actttagtgg cgaatggagc tggctgctgg tgttgttcgg ctttctgctg
     6721 gcgatagcca ataagttgct gatgcgccga ccgacctggc ttatagtgcg gcagaaattg
     6781 ctgttacgca tcccgattat gggttcactg atgcggggac aaaaactcac gcagattttt
     6841 acgattctgg cgctgacaca aagtgcaggc attacttttt tgcagggcgt agagagcgtc
     6901 agagaaacaa tgcgctgccc gtactgggtg caacttctga cacaaatcca gcacgatatc
     6961 agtaacggtc atcccatctg gctggcgcta aaaaataccg gggagtttag cccgctctgt
     7021 ttgcaattag tgagaacagg agaggcatcc ggctcgctgg acctcatgtt agacaacctc
     7081 gcccatcatc atcgggataa cacaatggcg ctggcggata acctcgcagc cttactggaa
     7141 ccggcgttgc tgatcataac gggaggaatt atcggtacgc tggtggtggc gatgtatctg
     7201 ccaattttcc atttaggcga tgcgatgagt gggatgggat aacgctggcg tgttgctcca
     7261 caccagcgtt ggaagattac aggttgttga agatgcggtt ttcttgttcc tgcacacgga
     7321 taaatgtggt gcgcttggtc agttctttca ggcgtgaagc cccaacgtat gtacaagctg
     7381 aacgcaggcc gcccaaaata tcacgcgcgg tattttcaac cgggcctcgc agcggcagct
     7441 taacggtttt accttctgct gcgcgatatt ccgcaacgcc gccaacgtga cgtttcatcg
     7501 cagactcgga gctcatgccg tagaacagca taaatttctc gccgttctcc tcaacgatgc
     7561 gaccgccgct ctcttcgtgg cccgccagca tgccgccaag catgacgaaa tcggcaccgc
     7621 cgccaaaggc ttttgcgaca tcgcccggcg tggtgcagcc accgtcgctg acgatcattc
     7681 cgcccagacc gtgcgccgca tcggcacatt cgattaccgc agaaagctgc ggataaccga
     7741 cgcctgtttt gacgcgagtt gtacaaacag aacctgggcc aatgccaact ttaacgatat
     7801 cagcaccgga gaggataagc tcctcacaca tttcaccagt cactacgttg ccagcacaaa
     7861 tggttttggt cggccacgct tcacgcgctt tcgcaacgaa ctgcacgaag tgttcggaat
     7921 aaccattcgc cacatcaata caaacgaagt ttaatgccgg gttcaggtcg agaatctgtt
     7981 tagttttttc gaaatccgca tcagacgtac cggtagaaac catcacatgt ttcagcacat
     8041 cagcggaaga attgttgata aacgcttgcc actcttcgac agaatagtgt ttatgcacag
     8101 cagtcaaaat atcaaaagaa gccagcgcag aggccataga aaatgtacct acggtgtcca
     8161 tatttgcggc gataattggc acgccggacc agctctgacc tgaatgtttg aaggtgaatt
     8221 gacgttccag ttcaacatcg gaacggcttt taagagtgga gcgtttaggg cggatgagaa
     8281 cgtctttaaa acctaacttc agatcttctt caatacgcat gtgcggattc ctggggttaa
     8341 tggctataag ggtaagagcg caactccagt gacgctatca tacgcactaa tcaatgcggc
     8401 gcaagactgc gaaattgtct ttttttacgc tacaatccca taaatttacc tggtaaatag
     8461 tgagcgaacg tttcatcaat ttcgctttcg tgcgctcatt tttaacgttt tgataatcat
     8521 gatgaattcc cgggaatata aattatgagg tatatagttg ccttaacggg aggcattggc
     8581 agtggcaaga gtaccgttgc caatgcgttt gctgatctcg gaattaacgt cattgatgcc
     8641 gatattattg cgcgtcaggt ggttgaacca ggtgcacctg cgctacatgc cattgctgat
     8701 cactttggcg ctaacatgat tgctgctgat ggaacattgc agcgccgggc cttgcgcgag
     8761 cggatcttcg ccaacccgga agagaaaaac tggcttaacg acctgctgca tccgctgatt
     8821 cagcaagaga cgcaacacca gatccagcaa gcaacttccc cctatgtact gtgggttgtg
     8881 ccattgctgg tagaaaactc actgtataaa aaagcgaatc gagtgctggt ggtggatgtc
     8941 agcccagaaa cgcaacttaa gcgcaccatg cagcgcgatg atgtaactcg cgaacatgtc
     9001 gaacaaatcc ttgctgctca ggcaacgcgc gaagcccgcc ttgccgtggc agatgacgtc
     9061 attgataata acggcgcacc ggatgctatc gcatcggatg ttgcccgcct gcacgcacac
     9121 tatttgcagc ttgcgtcgca gtttgtctca caggaaaaac cgtaatgcag acccaggtcc
     9181 tttttgaaca tccactaaat gaaaaaatgc gtacatggct gcgcattgag tttttgattc
     9241 agcaactcac cgttaattta cccatcgttg accacgctgg cgcgctgcat ttcttccgta
     9301 atgtcagtga attactggat gttttcgagc gcggcgaagt ccgcactgag ctgttgaaag
     9361 aacttgaccg gcagcaacgt aaactccaga cctggattgg cgtgcctggc gtggaccaga
     9421 gccgtattga agcattaatt cagcagttaa aagcggcggg gagcgtatta atttccgcgc
     9481 cgcgtatcgg gcaatttctg cgtgaagatc gtttgattgc tctggtgcgt cagcgactga
     9541 gcatcccagg cggctgttgc agctttgatt tacctacatt gcacatttgg ctgcatctac
     9601 cccaggcgca gcgcgacagc caggtagaaa cctggattgc cagcctgaac ccgctcaccc
     9661 aggcacttac catggtgctg gatttaattc gccagtcggc ccccttccgt aaacaaacca
     9721 gcctgaatgg tttttatcag gataacggtg gcgatgccga cttgctgcgc ctgaatctgt
     9781 cgctcgattc acagctttat ccgcaaattt ccggacataa gagccgtttt gccattcgtt
     9841 ttatgccgct ggacactgaa aacggacagg taccggaacg tctggatttc gaactggcct
     9901 gttgctaagg agtgaaaatg tcagaaacta ttacggtgaa ttgcccaacc tgcgggaaaa
     9961 cggtggtgtg gggtgaaatc agcccgtttc ggccattttg ctccaaacgt tgtcagctga
    10021 tcgacctcgg agaatgggct gctgaagaaa aacgaatccc cagcagtggc gatctttccg
    10081 aaagcgatga ctggagcgaa gagccaaagc agtgacattt gtctgatgcc gcacgtaggc
    10141 ctgataagac gcggacagcg tcgcatcagg catcttgtgc aaatgtcgga tgcggcgtga
    10201 acgccttatc cgacctacag acgcttaagc ttcgcaatta ccggttcatt ggctggcgga
    10261 aaatcatcgg cattaagacc gactagcgac atccactcac cgggttgccc ttctttaccc
    10321 cacggctccc cttcccagct ttcgaccagc cagaaccaca gagttatatg cctgtccggg
    10381 aattcatatt ccagtttttc aaatagcgaa aaatgttgtg gggtaatccc gacttcttcc
    10441 tgaagttcac gcaccaccgc ctgttccggc gtttcgccca tttcaatttt accgccggga
    10501 aactccagtt tattcgccat gtgcgcatct gctgcgcgac gcgttataaa gatttcattg
    10561 ttctcgttgc gaataatacc taccgcaatt tgcagctttt tcattgtctt aaacctataa
    10621 aaaaggcgca gaatcctgcg ccttttactt caactgttag cttttattgc aggcgaccat
    10681 ggcactgctt gtatttttta ccagaaccgc acgggcaagg atcgttacgt cctactttgc
    10741 gctcaccggt ttgcgccgcc agtgcagctg cggctgcaga gtcgtcatcc tgatggctaa
    10801 gctgctgcat ttgcgctaaa cgctcggctt ccatacgacg ctgttgttcc agctcctcaa
    10861 cctcttcagg catacgtacc tggactttgc tcagcgtgct gataacttca tattttaacg
    10921 actccagcat cgctgcaaac atggagaacg attcacgttt gtattcctgc ttcggatctt
    10981 tctgtgcata gccacgcagg tggataccct gacgcagata gtccatcgcc gccaggtgct
    11041 ctttccacag agagtcgaga gtttgcagca tgacgccttt ttcgaagtga cgcatcatct
    11101 cagcaccaac cacttcttct ttacgctgat acacttcgat ggactgcgcc agaattcgct
    11161 cacgcagcgt ctcttcatgc agttctggtt ctttatccag ccactcggca attggcaaat
    11221 cgaggtcgaa atcgttcttc agacgttcct gcagccccgg aatatcccac atttcttcca
    11281 gtgactgtgg cggaatgtag gcatcaatgg tcgctttgaa cacatcttca cgaatgctgt
    11341 tgatggtttc gctcacatcg ctgacatcca gcagttcgtt acgctgggag taaatggcgc
    11401 gacgctgatc gttagccacg tcatcatatt ccagcagttg cttacgaatg tcgaagttac
    11461 ggctttcaac tttacgctgg gcgttggcaa tcgctttagt cacccacggg tgttcaatgg
    11521 cttcgcctgg cttcataccc agtttacgca tcatgccgga tactcggtcg gaagcaaaaa
    11581 tacgcatcag cgcatcttcc atcgacaggt agaaacggga agaaccagca tccccctgac
    11641 gaccagaacg accgcgcaac tggttatcga tacgacggga ttcgtgacgc tcggtaccga
    11701 tgatatgcag gccacctgct tccagtaccg catcgtgacg tacctgccag tcggctttaa
    11761 ttttttcaat ttgctctacg gtcggatttt ccagcgcggc aacttctgcc tgccagctac
    11821 caccgagcac aatatctgta ccacgacccg ccatattggt cgcgatagtc accgcagccg
    11881 gataacctgc ctgagcaaca atcgccgctt cgttggcgtg gaatttggcg ttcaggacgt
    11941 tgtgcttaat accggctttg gtcagttcgt ttgacaccag ctccgatttt tcgatggaga
    12001 tagtacccac cagcaccggc tggcctttcg cagtacgttc tttgatatct tcaatgatcg
    12061 cctgaatttt ttccgcttca gtcatgtaga ccaggtccgg cagatcttta cgaatcattg
    12121 gacggttggt cggaacaacg acggtatcca gcttgtagat ggagctaaat tcgaaagctt
    12181 cggtatcagc agtaccggtc atccccgcca gtttttcata cagacggaag tagttctgga
    12241 aggtgatcga agccagcgtt tggttttcgt tctggatctg cacaccttct ttcgcttcca
    12301 cagcctggtg cagaccatcg gaccagcgac ggccctgcat ggtacgaccg gtgtgttcgt
    12361 caacgatgat aacttcacca tctttaacga tgtagtcgac gtcgcgggta aacagcgcat
    12421 gagcgcgcag cgccgccgtt acgtggtgca tcagcatgat gttggccgga gagtacagag
    12481 actccccttc atccatgatg ccctctttca ccagcagttc ttcaatcagc accagaccac
    12541 gttcggtcag gttcacctgg cgagattttt cgtccaccga gaagtggcct tcgccctgga
    12601 aggtttcgga gtcttctttt tcctgacgga tcaggtgcgg aataatttta ttcacgcgtt
    12661 tatacatttc cgagctgtct tctgccgggc cggaaatgat cagcggtgta cgcgcttcat
    12721 cgatcaggat ggagtccact tcgtccacca gcgcatagtg cagtttacgc tgtacacgtt
    12781 cttcagggct gaacgccata ttgtcgcgca ggtagtcaaa gccgtattcg ttgttcgtac
    12841 cgtaagtgat gtcagctgcg taagcttcgc gctttgccgg tgctggcatg cccggcaggt
    12901 tgataccgac agtcaggcca aggaattcaa acagcggacg gttgttttcg gcgtcacgtt
    12961 gcgccaggta gtcgttgacg gtaactacgt gcacgccttt accggttagt gcgttcaggt
    13021 aagcaggcag cgttgcggtc agggttttac cttcaccggt acgcatttcg gcgatgcagc
    13081 gttcgttaag aaccataccg ccgagtaact gaacgtcgaa gtgacgcata ccaaagacgc
    13141 gcttacttgc ctcacgtacc acggcgaaag cttccgggat cagattttcc agcacttcgc
    13201 ctttttccag acgtgcacga aactctgcgg ttttcccttt cagttcttcg tcggagagtt
    13261 tttccatctc cggttccatg gcattgatga tgttgaccac tttgcgcatc cggcgcaggg
    13321 tgcgatcgtt acgactaccg aaaactttag ttaacaattt gattagcata ataaaatctc
    13381 aaacgccccg cgttgcggag ttaataaaat gaagtaaagg tttattgttg ttaggtgagg
    13441 cgttgagggc cagcacggat gccttgcgcc tggcttatcc agacgggcgt gctgaatttt
    13501 gcttgtgggg taaaatgcgc ataatcaatg cgataaccct tttcagacgg cgtgccttcc
    13561 tgggtcagca gcgcgctgag cgtatccagt aatgcaagat gttgcgcctg aagaggcaaa
    13621 gattcttcag caacgggcag tgtttgcggt gccattgcga aagaaagatg acggattacc
    13681 gtgcgaatgg catgttgatg ccagtaatca acggaatagt tcgaattcgg gcggcgtgtg
    13741 ttcgcttcca gcaaggccaa ttgaccaaag ttaactttgg ctgaaggctc gtggttgcgg
    13801 gttgtcgctt ttgcgggcgc gtttggttcg gcggcgttgc tgagcgcagg caaacctaaa
    13861 ctcgccgcaa ccatccctaa taagagatgc ggccagaagt agcgtttacc aaactgtcgc
    13921 cagcgcgtca gtattccact cacgttattg ccatcccgat cgtattcaaa cgtatttagc
    13981 gcacaaatct tatcattaaa gcctgcagtc cacagcacga atgaagataa gttgtgcgga
    14041 aaagtgctta agaaaacagc gttcgcaccg ttttttagag ctcttataaa attcaaaaaa
    14101 aacgactggt tcacctggcc ggagagagtg ccagatttgc cagtcgaatt ttatacgaca
    14161 gtataaatgt cgttatgcca gtacagctga aggcgctttg aaggccaacg gcagttctgc
    14221 gtcgtcctgg aaggtcacat attcccaggc ttcctgtttc gccaggacag cctgcagcag
    14281 tttgttattc agtgcatgac cggatttata agcggtaaat gcaccaataa tattgtgacc
    14341 acacatgaac aagtcaccga tcgcatcgag cattttgtga cgcacaaatt cgtcttcaaa
    14401 acgcaggccg tcttcgttca gtacgcgata atcgtcaaca acgatggcac aatcgaagct
    14461 gccgcccagg cacaaaccac gggactgcag atattcgata tcacgcatga aaccgaacgt
    14521 acgcgcacgg ctgatctggc gcataaacgc atcagcggag aagttcatcg catagcgctg
    14581 gttgctggaa tcaatagccg gatggttaaa atcgatggtg aaatccagcg aaaaaccatt
    14641 gtacggctta aattcagccc acttatcgcc atcttcgaca cgaacagtct ctttgatgcg
    14701 aacaaatttt ttggcgcagt tcaactcgtc gataccggcg tcaagcagca ggtatacaaa
    14761 cggagcggcg ctgccgtcca tgatcgggat ttccggcgcg ttaacttcga taacaatgtt
    14821 atcgatgccc aagcccgcga gagcagcatt gaggtgctct acggttgaaa tccgtacatc
    14881 atgctcgttg accagacacg tacagagcat ggtatcacgc acagatttgg catcggccgg
    14941 gaaatctacc ggtggattca agtcggtgcg acgatagatg accccggtgt tggccggcgc
    15001 agggcgtaac gtcagggtga ctttcttgcc ggtatgtaaa ccgacacccg tcgcctgaac
    15061 gatacgttta agtgtccttt gtttgatcat cgtattatct cgccaaatta cctatccaac
    15121 cgaagtgtac tatacattcg gcgggccagt ttagcacaaa gagcctcgaa acccaaattc
    15181 cagtcaattc ttaatcagct tgcttacgca ggaatgctgg gatatccaga taatccggct
    15241 ctttcgcagt ttgcggcgca ttgtcattca cgactttagc aaccggcttc tgctcctggg
    15301 tcagcggagc catcccatgc tgctggtagc gatccatcac tggctgctga acctgcttat
    15361 tggtcaccag agtgatttca ggacgtttgt ccatgccgat acctgtcgca acaacggtta
    15421 cgcgcagctc gtcattcata tccgggtcaa gagaagtacc gataaccaca gtcgcgttgt
    15481 cggaagcaaa tgcacggatg gtgttaccta ccgtttcgaa ctcatccaga cgcaggtcga
    15541 agcccgccgt gatgttaacc agcacgccgc gcgcgccaga caggtcgata tcttccagca
    15601 gcggagaaga gatagccatt tcagcagctt cttccgcacg gtcttcaccg ctcgccacgc
    15661 cagaacccat cattgcgtag cccatctcag acattacggt gcgtacgtct gcaaagtcca
    15721 cgttcatcaa acccggacga gtaatcagtt cagcgatacc ttgcacagcg cctttcagta
    15781 catcgttcgc tgcgccaaac gcatccagca gggagatacc gcggcccaga actttcagca
    15841 gtttgtcgtt cgggatagtg atcagagagt ccacatgctt ggacagttca gtgatcccct
    15901 gctccgcgaa tgccatacgc ttcttgcctt caaagttgaa aggcttagtg acgacagcaa
    15961 cggtcaggat acccaaatct tttgccactt cagcgacgac tggtgctgca cctgtaccgg
    16021 taccaccacc catacccgca gcaataaaga ccatgtctgc accttccagc gccgcacgca
    16081 atgcatcgcg atcctcatca gccgcattgc ggccaacttc tggattagcg ccagcgccca
    16141 gtcctttggt gataccgcta ccgatttgaa tcgtctgtcc aaccgctgtt ttacgcagcg
    16201 cttgtgcatc ggtatttacc gcgaagaatt caacaccttc aatgcgctcg cgcaccatgt
    16261 gttcaacagc attaccgccg ccgccgccga cgccgatgac tttaatcacc gcgtcattgg
    16321 taagttccat tggttcaaac atagtttctc tccgatttgt gcctgtcgcc tgaggccgta
    16381 atcatcgtcg gcctcataaa aattaaaact cttttcgcag ccaactattg agtcgcttga
    16441 tccacgagcc aactgatgct gtaacacgtt tttctacttc agcttcaccg ttaagatgtg
    16501 actctttccc atagtgaagc aatcccaccg ccgtcgaata atacggctcc tgagcataat
    16561 ccgttaaacc ggtaatgttc agcggcgcgc cgatacgcac ttgcgtatga aacacgcgct
    16621 gagcacaggc tgcaagacct tcgatctgcg ctgcgccacc ggttaataca atgcctgccg
    16681 ccaggtgatg tttaacccct tgttggcgaa gcttttcctg caactgcaat atctcttcgt
    16741 tgaccaggtt gagcagctcg gtatagcgcg gctcgatcac ctctgccagg gtctgacgtt
    16801 gcagactccg cggcggacga ccacctacgc tcggcacttc cacgctctca tcttttccaa
    16861 cgatggaacc cagcgcacaa ccgtggcgaa ctttaatcgc ttcggcgtcg cttggcggcg
    16921 tgccaaaggc gtaagcgata tcactggtca cgacattgcc agcataagga attaccttag
    16981 tgtggcgcaa tgccccaccg gtataaacgg cgatatccat tgtaccacca ccgatatcga
    17041 cgacgcagac acccagttca cgttcatctt ccgtcaatac cgaataactt gatgccagtc
    17101 cggcaaatat cagttggtca actttcagcc cacaacgttc aaccgctttg acgatgtttt
    17161 tcgccatatc gttgtgacat gtgatcaggt gcacttttgc ctgcatccgc acgcccgaaa
    17221 gtcctaccgg attcttgatc ccttcctgat agtcaatcgc atactcttgc gggatcacat
    17281 gcagcacacg atgctcatcg cgcacacgca ccgatttcgc ggtatggacg acgttttcca
    17341 catcttcttg cgtcacttct tcttcagaaa taggcaccat accaatttca ttctggcagc
    17401 tgatgtgctt accagaaagc gccagatata ccgaagagat ctgacaatct gccatcaatt
    17461 ctgcctggtc aatggcgcgt tgtacgcact tgaccacgga ttcgaggtcg ttcaccccgc
    17521 ctttatccat accacgtgac gggcagctgc ccacgccaat gatattgacc ataccgtcgg
    17581 gcagaacttc ccctactaaa gcggcaacct tcgcggtacc aatctccagt cctactacca
    17641 gttttctgtc cgtcgccttg atcattgttg ttctgcctgt gcctgatttt gttgctgagt
    17701 agattcctct ggcggcaagg gcgcccagcc tactgccgct ccagagtcat aacgcaaatc
    17761 aacgtagcta atccgtttgc catcggtttg cgcctgctgc tgtaaaaccg gataaagttc
    17821 tacaaagcga gccaaacgtt tcatcgtatc gccccggcca agattgagct taatatcgtt
    17881 attcagcgtc aactgccagg aacgccgcgc ggtcatcgcc gcttccttca gagtaaatct
    17941 gtcctttgcc agcatctgcc ccatttcgcg atagccctgc aacacttcat tggcgctgcc
    18001 ttccgggcca tacagcattg gaagcacctg cttgctggtg cgatctggcg gcacgctgaa
    18061 ggtgtttcct tccgcgtcta ccatgtgttg atcattccac cgcgcaatcg gcacatattc
    18121 aaccagatga atcttcaatt catcaggcca ctgctttctg acgctcacct gcttaatcca
    18181 cggcaggcgt tgttctattt gcgtctggat gatgttgaca tcctgggtca taaaggtacc
    18241 cggctcaccc aatgccagga tcgactgccg gatatcgtca ttacgcgtgt aatggcgttc
    18301 accggtcaac accagctttg agagcggcag gcgttgcgca tcttccatcc agcccaacac
    18361 gacccagccg ctcaccaaca ctgtcgttaa aacggtcagc aggaaaagga tccccgccag
    18421 acgcgttcca ttattgcggc gagaagaaac ctcttcttcg ctatttcgcg tgttcagagc
    18481 agcctgcgac atattagtcc gccagttcca gaattcgtac taccaactgc gagaagctca
    18541 tacctgcctg acgtgccgcc atcggcacca ggctgtggct ggtcataccc ggtgaggtat
    18601 tggcttccag cagataaaac tgtccatcgc tgtccagcat aacgtcaata cgtccccatc
    18661 ctttgcaacc taacgtcgtc catgctttca gcactaatgc ctgcaaattg gcctcttgtg
    18721 acgcttccag acctgcgggg cagaaatact gtgtctcatc agagagatac ttcgcctcat
    18781 aatcatagaa ggttccggac ggttgaatac gtattgacgg taaaatttct tcaccgagta
    18841 tcgcaaccgt gaactccggc ccacttagcc atttttcaat caatacttct tcatcgtgct
    18901 gaaatgccaa tcttaatgca tcttgtagag cattttctgc tactactttt gacattccca
    18961 cactggaacc ttcgcggctc ggcttaacga taaccggcaa acccagagca gaaatttctg
    19021 ctaactgctt atcgctcagg cctttttcaa actctgcgcg ggttaacgct acccacggcg
    19081 cgaccggtaa accggcacct tgccacagca gtttgctgcg tagtttatcc attgaaagcg
    19141 cagatgccat cactccgctg ccggtataag gcaagcccat cagctcgagc atgccctgca
    19201 gcgtaccatc ttcaccgccg cgaccgtgta gcgcgataaa cactttctgg aagcccatcg
    19261 acttcagttg cgtcacgtcg acttctttcg ggtcgacagg atacgcgtca ataccgcctt
    19321 cacgcagccc ggctaacacc gctgcgccag aattcagaga aacttcccgc tcagcggagg
    19381 tcccgcccaa caggaccgcg attttatcag tcatgttgtt cttcctccgg agtttgcggc
    19441 ttcagtttga tttcagctaa agaacgggca atttttccga tattaccagc cccctgaacg
    19501 agaatcaggt cgttaccggt taataccggt gccagcatct cggctacctg cgccgggtcc
    19561 ggcaccagaa tgggatcaat tttcccacgt ccacgaattg tgcgacacag cgaacggctg
    19621 tccgctcccg gaattggcgc ttcgccagcc ggatacactt ccagcatcaa cagggtatca
    19681 acctgcgtca gcacattggc gaaatcatca tacaggtcgc gcgtacgggt aaaacggtgc
    19741 ggctgaaaca gcattaccag gtttttatcc ggccagcctg cacgcgctgc tttaatagtg
    19801 gcgtccactt ccgtcgggtg gtggccgtag tcatcgacca gcattgccgt accgctttta
    19861 ccattcactg gctccagcgg gaattcaccg aggaaatcaa aacggcgccc agtcccctgg
    19921 aagctctcca gcgcacgtaa aatagcctcg tcatcaattc cctcttccgt agcaaccgca
    19981 accgcagctg cggcgttcag cgcgttatga cgacctggcg cattcagggt gacgcgcatc
    20041 ggctctttgt cctggcgcag cagcgtaaag tgcccctgcg ggccaatctg ctgataatct
    20101 tctacacgca cgtcggcatc ttcgttgaag ccgtaagtcg tggtctgacg tcccactcgc
    20161 ggtaacaatt cgcggatcac cggatcatca acacacatca ccgcacgacc gtaaaacggc
    20221 aggttgtgca gaaaattaat aaaagtctgt tttaaattct caaagtcgcc ctggtaggta
    20281 tccatgtggt cggcttcgat attggtgaca atcgccacca tcggttgcag atgcaggaac
    20341 gatgcatcac tctcatctgc ttcggcaatc aggtaccgac catgccccaa acgcgcatga
    20401 acccccgccg cttttaccag cccgccgtta acgaaggttg ggtcgagccc cgcttctgcg
    20461 tagatgctgg aaaccatcgc ggtggttgtc gttttgccgt gcgttcctgc aatggcgatg
    20521 ccatgacgaa aacgcattaa ctcagccagc atttcggcac gacggatcac cggaatacgc
    20581 gcttcatgag ctgcgacaat ttccgggtta tcggcagaaa tcgcgctgga aacaacgacc
    20641 acgctggcat cacgtacgtt ttccgggcga tggttgaaat aaatcgtcgc cccaagattc
    20701 attaactgtt gcgtgaccgg atttggcgct aaatcggaac cactgatctg ataaccttca
    20761 ttggccagaa cttcggcaat accgcccata ccggcaccac cgatgccgac aaaatgtatg
    20821 tgccgaacgc gacgcatttc gggcacgatg gaacgcagtt ttgccaattg ttgtgtattc
    20881 attctttacg ccattaactt cttaaattca tacgatgcaa aaggcatcgc tacaattacg
    20941 cccgggcagc ccggctcact tcatttgcca ctcgctcggt ggcatccgga atggatgcag
    21001 cgcgggcgcg ttctgccatg gttaataagg tttctcgcga ccacccggcc agggtgttgg
    21061 cgacagcatc cacgctaagc tgtggctgct cgataatttt ggctgcgccc gctttttcca
    21121 gcggtagcgc attccagtat tgctggcggt ctttatgttg aaacggcaca aacaacgccg
    21181 gtagtcctgc cgcggcgatt tcactcaccg ttaaagcacc ggagcggcaa acgacgacat
    21241 ccgcccacgc atacgccgcc gccatatcat caataaattc cgtcacttta tgctgcggtt
    21301 gccccgcttc ggcatacgcc tgttcaacgg attgttgcga acctttaccg ctctgatgcc
    21361 agatagtgac tgaatcaccc agtttcgcag caacctgcgg cattgtctgg ttaagaatgc
    21421 gtgcgccctg ggaaccaccc actaccagca cacgaaccgg accttcacgt ccagccaaac
    21481 gttgctgcgg caacggcagc gccagcacat cggtacgcac cgggttaccc accacttccg
    21541 cattagggaa agcgcctgga aacgcctgca tcactttggt ggcaatcttc gccagccatt
    21601 tattggttaa gcccgcaata ccgttttgtt catgaagtac aaccggaatg cctaacgacc
    21661 acgcggccag accacctgga cctgatacat agccgcccat accgagtacc acgtcaggtt
    21721 tgtacgcttt cataatcgcc cgcgcctgac gccaggcgtt gaagatacgc agcggcgcag
    21781 ctatcagtgc ttttatacct tttccacgca gaccagagat acgaatgaaa tcaatttcga
    21841 tgccatgttt tggcactaag tccgcttcca tacggtcggc agtccccagc cagcgaactt
    21901 gccaaccctg agccattaga tggtgcgcaa ccgccagtcc cgggaataca tgtccaccgg
    21961 ttccgcctgc catcaccatt aatcgctttc cttgaccact catcgtgaac ctcgtacaaa
    22021 cgcctgcgct ttctccagac gcgtttcata atcaatacgc aacagcatca tgatggctgt
    22081 cgacataatc agtaagctcg aaccaccgta actgatcagc ggcaatgtca gacctttggt
    22141 cggtaacatc cccgccgccg cgcctacgtt aaccagcgcc tggaagctaa accagatgcc
    22201 aatagaacag gcgagaaaac cggaaaaacg gtggtcaatt tctaacgctt tgcggccaat
    22261 cgacatcgcg cgaaaagcga cgaagaatac cattaaaagt gccagcacca caccgacata
    22321 ccccagttct tcgccgataa tggcgaaaat aaagtcagtg tgcgcttccg gcagatactc
    22381 cagtttttgt accgagttac ctaaaccttg tccccaaagt tcgccgcgac caaacgccat
    22441 cagcgattgc gttaactgat agccgctgcc aaagggatct tcccacgggt tccagaatgc
    22501 ggtaacacgg cggatacggt acggttcggc gagtatcagc aacacaaccg ctgaaatgcc
    22561 cataccgata atggcaatga actgccacaa tttcgctccc gccaggaaca acatcgccag
    22621 cgtagtcaca aacaacacca ccaccgtacc aaggtctggc tgtgccagca gtaacactgc
    22681 caacaccaga atcacgccca tcggtttcag gaagccgcgc aggttattac gtacttcgtc
    22741 gcctttacgc accagatagt tggcgatata acaaaacagc gacagttttg tcagctccgc
    22801 aggctggata cgcagcaaac cgagatcgat ccaacgcgat gcccctttaa ccgagctacc
    22861 cactaccagc acgatcatca gcaggatgat agatccgagc agcatcgtgg cactgtagcg
    22921 ttgccagaac tccatcggca gacgcagcgt aatgatcgcc agaatgaatg ccaggatcag
    22981 atagacgcca tcacgcttcg cgaagaagaa cggatcgttg gttaagcgtt gccctatggg
    23041 cattgacgcc gaggtcacca tgataaagcc aatcgccgca aggccgaagg tcagccacag
    23101 taaggtgcga tcgtacatga tcaggctgtc ggtatctttt tcccgcgagc ccatcaccca
    23161 gccttttagc gccgtggaga tccagaccag gatactgaat cctggcaggc gcggcatttt
    23221 caggcgaggg agagataaac gcatcaacct aactccttcg ccagacgggc aaactcattg
    23281 cctcgttgtt caaagttctt gaactgatca aggctggcac aggccgggga gagcagaacc
    23341 atatcgcccg gctgaacacg cggagccagc aagcgcatcg cctgttccat agtttcggtt
    23401 tgttctgcca cttccgggcg tagcgccgcc agctgcgcac cgtcacgacc aaaacagtac
    23461 aaacgcacgt tgtcgccatt cagatagcgc gccagtggac tgaagtccgc cgatttacca
    23521 tcgccgccca gcaacaaatg cagcgtgccg tctacctgca agccattcaa cgccgcttcc
    23581 gtactgccga cgttagtggc tttcgaatcg ttaatccagc gtacgccatt gtgctccagc
    23641 accacttcaa agcgatgcgg cagaccggcg aaggtggtta acgctttcag gctgctggcg
    23701 cgcggcaaac cagctgcgtc tgccagtgcc agtgctgcca gcgcattggt gtagttatgc
    23761 tgcccggaaa gtttcatctc tttcacgttc agcactttct cgcctttcac tcgcagccag
    23821 gtttctccct gctgatgatt caggtgatag tcacccatgt tgacgccaaa gctgacgcag
    23881 cgttcatcag caccgcgaat cggcattgtt aaggcatcat cagcattgac gacacaaact
    23941 ttcgcatttt cgtaaatacg caattttgcc gcacggtatt gctgcaaacc aaacggatag
    24001 cggtccatat gatcttcagt cacgttcaga atggtcgccg ccaccgcctg taagctggaa
    24061 gtggtttcca gctggaagct cgacagttcc agcacgtaca gttcgcactc agcatcaagc
    24121 agcatcaacg ctggcaggcc aatattgcca cccacaccaa cgttaacccc cgccgctttc
    24181 gccatttcac ccactagcgt ggtgaccgtg cttttgccgt tagaaccggt aatcgccaca
    24241 atcggtgctt gtgcttcgcg acagaacagc tcgatatcgc caacgatttc gattccggca
    24301 tcagcggcag cgcttaagga tggatgcgcc agtgcaatac cgggactggc gacaatcaga
    24361 tctgccgcca tcagccattc atcattcaga ctgcccgtgt ggcgttctac ggcttcgggt
    24421 aatttatcca ggccaggcgg tgtcatacgc gtatccataa cgcgcggcgt cacaccgcga
    24481 gcgaggaaaa agtccacgca ggaaagcccg gtgaggccca ggccgataat gacgacattt
    24541 ttaccctgat aatcagccat gattaacgta ccttcagcgt tgccagacca atcagaacca
    24601 gcatcagcga aataatccag aaacgcacaa tgacgcgcgg ttccggccag cctttcagtt
    24661 catagtggtg atgaatcggt gccatgcgga aaatacgttg tccgcgcagt ttaaaggagc
    24721 cgacctgcag gatgacagaa agcgtttcta ccacgaacac gccccccata atcaccagca
    24781 ggaattcctg acgtagcagt acggcgataa tgcctaacgc accacctaac gccagcgaac
    24841 ctacatcgcc cataaagacc tgcgccggat aggtgttaaa ccacaggaag cccagtcctg
    24901 ccccgactat cgccgtgcag acaatgacca gttccccggc gtgtcgcaga tacggtatgt
    24961 gtaaatagct ggcaaagttc atgttgccgg tcgcccacgc caccagcgca aaaccaccgg
    25021 cgacaaatac ggtcggcata attgccaggc cgtcgagacc atcggtcagg tttaccgcgt
    25081 tgccagtacc cacaatgacg aagtaagcca gcagaatgta gaacagcccc agctgcggca
    25141 tcacatcttt aaagaatggg accaccagct gcgttgcggg cgtgtctttg ccggcaaggt
    25201 acagggcgaa ggcgacaccc agcgcaatga ccgacatcca gaaatacttc caacgagcga
    25261 tcaacccttt ggtgtcttta cgcaccactt tgcgataatc atcaacaaag ccaataacac
    25321 cgtaacctac cagcaccacc aacacgcacc agacgtacgg attggacggg taagcccaca
    25381 gcagtacgga gatcactatc gccgtcagga tcataatccc gcccatggtc ggcgtaccgc
    25441 gcttgctgaa gtgtgattca ggaccgtcgt tacgcaccac ctgaccaaag gaaagttttt
    25501 gcaaatgagc aatcatacgc gggcccatcc acaatgagat gaacagcgcg gtcagcaggc
    25561 tgacgatggc gcgaaacgtc agataggaaa agacgttaaa gccggaataa tatttgacca
    25621 aatgttcggc cagccaaact aacatgtccc attctcctgt aaagcgcgta ctacctcttc
    25681 catggcggca ctacgtgaac ccttaactaa aatcgtaatt acctgttgct cagcaatcag
    25741 tgatttaaga cgcgtaatta acgcagtttt atcagcaaaa tgttcgccaa cgccgctggc
    25801 ggtgctgata gcatggcttt gtttacccac gcttaacacg cggtcaatac cagcagcttt
    25861 tgccgcctcg cccacctgta catggcaggc ttcgctttca gcgcccagtt ccgccatatc
    25921 gcccaccacc agcacgcggt agcccggcat ttcagccagt acctgaacag cggcggtcat
    25981 tgaaccgaca ttggcgttgt aggagtcgtc gagcagcaac tggttttctg ccagttggat
    26041 ggggaacaga cggcctggaa cagctttcag atttgccagc cccgctttga tagcatcaag
    26101 cgttgcgccc acggacatgg agagcgcagc ggctgccagc gcattcgcaa tattgtgacg
    26161 ccccggcaac ggcagcagaa catcgacgct accggttggg gtttgtaggg taaattccgt
    26221 accgtgcgag gtcacatgga tattggtggc ggtgaaatcg ctgttggcgg cattgggtga
    26281 gaaacgccac actttgcgtg agccaattac gctctgccag ttcagccagt cgttgttgtc
    26341 ggcgttcata atggcgatac cgttttccgg caggccgcta aagatttcac ctttcgcttt
    26401 cgcgacaccc gcaagcgagc caaaaccttc cagatgcgcc gctgccaggt tgttgaccag
    26461 cgcagcttcc gggcgagtca gactcacagt ccaggctatt tcgccctgat ggttcgcgcc
    26521 aagttcaata actgcgtaat cgtattccgg cgttaagcgc aacagcgtca tcggtacacc
    26581 gatgtcgttg ttgagattgc ctgccgtata aagcgtgttg ccgcactggc ttaaaatcgc
    26641 cgccgtcatc tctttaacgg aggttttgcc ggaggacccc gtcagagcaa ccacgcgcgc
    26701 cggaacttgc tggcgaaccc atgcagccag ttcaccaaac gccagacgcg tatccttgac
    26761 gattaactgc ggcaggtcga tgtccagcgg acggctaacc agtagtgcgc ctgcgccgcc
    26821 agctttcgcc tggtcggcaa aatcgtgggc atcaaaacgt tcgcctttca gggcaacaaa
    26881 caggcagccc ggcgtcagtt ttcgggtatc agtggttaca gcatcaaggg tgatatctgc
    26941 accttgcagt tcaccgttga gaatgtcggt aagttggcta agggttacgc taatcatgca
    27001 atcaccccca gcagacgcgc caccgtgacg cgatcggagt agtccagacg ctgattgcca
    27061 acaatctggt aatcttcatg gcctttgccc gcgaccagta ccacatcatt ctctttagcc
    27121 tgcataacgg cgcaagtcac cgcttcagca cggccttcca tcactttggc atgtccggca
    27181 tctaacattc ccgccagaat atcgttgatg atggcacgcg gttcttcggt acgcgggtta
    27241 tcgtccgtca ccaccgccac gtcagcaaac tcttcggcaa ttgcgcccat cagtggacgc
    27301 ttacctttat cgcgatcgcc accacagcca aagacgcacc acagcttgcc cgcacagtgc
    27361 aggcgcgccg cctgtaaggc tttttccagt gcatccggcg tatgcgcgta atccaccacc
    27421 accgtcggtt tgcctggcgc agtgaacact tccatacgtc cgcaaaccgg ttgcagacgc
    27481 gcggcggttt tcagcagatc agccagtgga tagccgagtg ccagcagtgt cgccagcgcg
    27541 agcagcaggt tgctgacgtt aaaagcgccc atcagatggc tttcaatttc gccatcgccc
    27601 caacttgagc taaagcgaat cgtcgcaccg ctgtcgtgat agttcacgtc gatcgctttt
    27661 aaccagcgtc cgtgacagtt cggattgata tgatcttcca ttgataccgc aaccgcgtcc
    27721 ggcagttttg ccagccagcg gcggcccact tcatcgtcgg cgttaataat cgcctgaccg
    27781 caatgatgtt cagaataaag cagccatttc gcagcttcgt agtgttccat atcaccatga
    27841 taatcaaggt gatcgcggct taagttggta aagaccgacg ccgcaaattt caatgccgcc
    27901 acacggtgct gtaccagccc gtgggaggaa acttccattg cgcaaaacgt cgcgccctgc
    27961 tccaccagcc ccgccagctc atgctgaaca tcgactgccg aaccggtagt attttctgtc
    28021 gggatcactt tcccaagcag accgttacca acggtgccca ttaccgcgct ggtttcgcca
    28081 agcagttggc tccactgcgc cagcagctgg gtagtcgtgg ttttgccgtt ggtgcccgtt
    28141 acgcctacga gacgtaaatt gtcagagggt tcatggtaaa agcggcccgc cagtgcagat
    28201 aaacgctcgt tgagctggct gagatagatg accggtacgc cgtgcatttc acggatttca
    28261 ccatcggtcg cctcatcttt cgcctctgca ataatggcag ccacaccttg cgctatcgcc
    28321 tgcgggatat atcgacgccc gtccgcctga tgacctacta cagctacaaa gagatcgccc
    28381 gccgcagcca cacggctgtc gagtgtcatc tctcgcagtg ctcgcgaagg tgcgtctggc
    28441 acccacggag caagaaggtc gcgcaaatta cgatctgcca cctgtcccct cgccttgatt
    28501 aatcacaaat tcatttttat cgcccgttgt cagcgcatcc ggctcgatgt tcatggtacg
    28561 caatacgccg cccatgatgg caccaaagac cggcgcggaa acggcgccgc cgtagtattt
    28621 acccgcctgc ggatcgttga taacaacaac cagcgcgaag cgcggctgac tcgcaggcgc
    28681 aacgcctgcg gtataagcaa tatatttatt gatgtagcga ccgtccggcc cgaccttttt
    28741 cgcggtaccg gttttaatgg cgatacgata gcctttaatc gccgctttca cgccgccgcc
    28801 gcctggtagc gccacgcttt ccatcatatg caccacggtg cgaacaatgg attccgggaa
    28861 gacacgttca ccgggaaccg gggggtcaac tttggtaatc gacagtgggc gataaatgcc
    28921 gtagctgccg atagttgcgt agactcgcgc taactgtaac ggtgttacca ttagcccgta
    28981 gccgaaagag aaggtggccc tctctatgtc agaccaccgt tgtttttgag gatataagcc
    29041 actgcgttct ccgaccaacc ccaaattggt cgcttttccc agtccaaaac gtgagtaagt
    29101 atctactaac gctgaggacg gcatcgctaa cgccagcttg gaaacaccga cgttactcga
    29161 cttctgtaat accccggtca gggttaattc gctgtagcgt gccacgtctt tgatttcgtg
    29221 gccgttaatt cgataaggaa tggtattgag taccgagttt tcccgcacca cgccacgttg
    29281 caacgcggtc attaccacca tcggtttaac cgttgagccc ggttcaaaca cgtcggtgat
    29341 ggtacggtta cgcatcgcct ctttcggcgt gccgctcaga ttgttagggt tgtatgacgg
    29401 gctgttagcc atcgccagca cttcaccggt gttgacatcc accagcacgg cgctaccgga
    29461 ttcagccttg ttaaaggcca ccgcgttgtt cagttcgcga taaaccagcg cctgcaagcg
    29521 ttcatcaata ctcaacgcca ggttgtgcgc tgcctggctg tcagtagaag aaatatcttc
    29581 aattacgcga ccatagcggt ctttacgcac aatgcgctca cccggctgcc cggtaagcca
    29641 tttatcgaaa ctcttctcaa cgccctcaat cccctgacta tcgacgttag taaagccgat
    29701 gaggtgagca gtcacttcgc cggatggata ataacggcga gattcttcac gcagatgaat
    29761 ccccggcagt ttcagttttt tgatgtagtc cgccatgtca gggtttacct gacgcgccag
    29821 ataaataaag cgccctttcg ggttggcgtt aatgcgggca gaaagctgat ccagcggaat
    29881 attgagcgcg ttagccagcg ccttccagcg gtcaccgacg ctgataccgc cagcgtcatg
    29941 cacttctttc gggtcagccc aaatcgcttt taccggcacg ctcaccgcta acgggcgacc
    30001 agaacggtca gtaatcatgc cgcgggaggt ggaaacttgc tgaacgcgaa gagaacgcat
    30061 gtcgccctct ttcaccagca tatccgggga gataacttgt aaccacgcta cgcgtccgag
    30121 cagaaaagcc agcgccagga gaatacagcc gcataacaac gcaaaacgcc aactgataaa
    30181 gttggcatgt tcttcctgac gttttggttt ctgcgttttc gccgctgctt tcatgcgtcg
    30241 cgtttatcct tatttttgca ctacgatatt ttcttgtgac ggatcaacat gctgcatttg
    30301 cagtttttcc gtggcgatcc tttccacccg gctatggtcg ccgagcgcat tctcttcaag
    30361 gatcaggttg cgccattcaa tgtctaaagc atctcgctcc agcaccagtt gttcgcgctg
    30421 agcggtcagt aaacgggtat ggtgcgccgt ggttaccacg gtcaccgccg tcaaaataat
    30481 gcaaatgaac aggcagagtg gcagcttccc aaatcgcaaa agatcgtcac cgataacacc
    30541 aggcaatgca tggcgctcgt ggcttcccat cgatccttta actttgctta gagcttctgt
    30601 cactctgctg atcatgcgtt cgtcctctct gcgatacgca gaactgaact acgggcacga
    30661 ggattctcag ccacctcttc ttcgcccggc attaacttgc ctaatgctcg cagctgacgg
    30721 ccacccagtt ttttgagctg ctcttcagtc atcggtaacc ctgccggaac ttgcggaccg
    30781 cggctgtttt cacgcataaa acgtttcaca atacggtctt ccagcgagtg gaagctgatg
    30841 atcgaaagcc gcccacccgg ggccagcacg ttgagcgagc tttttagcgc ctgctctatc
    30901 tcctccagtt cactgtttac ccaaatgcgc accgcctgga aggtacgagt cgcgggatgt
    30961 ttaaacttat ctttcaccgg cgttgcagca gccacgactt ccgccagttc tttggtgcgg
    31021 gtcatcggct gttcgcggtt acgctcgaca atggcgcggg caatgcgttt ggcaaaacgc
    31081 tcttcaccat aggttttcaa tacccaggcg atatcggctt cttctgcggt ttgtagccat
    31141 tcagcggctg actgcccacg ggttgggtcc atacgcatgt ccagcggacc atcgcgcata
    31201 aaggaaaagc cgcgctcagc atcatcaagt tgcggtgaag agacaccaag atcgaggaga
    31261 atgccgtcga tcttgccgat aagatcgcgc tcggcaacgt attcgcccag cgcggagaaa
    31321 ggtccgtgga tgatggagaa gcgcggatca tcaatagtct tcgcaacggc gatagcctgc
    31381 gggtcgcgat cgatcgccag caaacgcccc tcttcgccaa gctgcgagag gatcagacgt
    31441 gagtgaccac cgcgaccaaa agtcccatca atgtagatgc catcaggacg gatattgagg
    31501 ccattaacgg cttcatccag cagcaccgta gtatgtttat agttttccat cattttatag
    31561 agacaagtcc tgcagtcgct ccgataagtc tccggtagcc aactgctctg cgtcgatatc
    31621 ttccttgacc tgttgatgcc aggttgtttc atcccacagc tcaaacttgt tgaactgtcc
    31681 aaccagcatc acttcttttg tcagcccggc atgttgccgc agtactggcg cgattaacaa
    31741 tcgacctgcg ccatccatct gacattcgct ggcatgacct aacagtaggc gctgcacacg
    31801 gcgctcaacc gggttcatgc tcgacagacg cgataatttt tgctcgataa tttcccattc
    31861 aggcaggggg taaagcagca ggcacgggtg atgaatgtca atggtgcaaa ccatttgacc
    31921 ggcagcgttc tcaagcagct gttcccggta acgggtaggc actgataagc gccctttgct
    31981 gtcgagattg actaacgttg ctccccggaa catgccagcc tcacccctta ttcccacttt
    32041 gccccacaat ttcccactga aaggagttta cggagcggag gaaaagcttg tcaagccagt
    32101 cacaaggcat accgaggtaa aaaacccgat gtttacggct aatatcagcg ttgtttattt
    32161 tacgtccaac gtgcgcagca aattaacgtt atgaatagct gtaagaaaaa atccctcatc
    32221 gtcatcaccg ttttaaaatg actcactatt ttccacagca aatataaagt gtcagtttgc
    32281 gacgcgagcg gcattttagg acatatcttc cccggttaac agtccctgtt gcgtctgtgt
    32341 ggcgcttgat gccagcgggt ttgcgcaaaa gcaaagaaaa gtgcttgtta aatcggcaat
    32401 tcatctctgc atgtaacaaa ataatgcaaa aacgcgctgt cgatatcact taattattgt
    32461 gaatttcagc tggtgagtta attaacgggc gggtttaaaa gaacttatca ataatagtca
    32521 ggaatagtct tatttacttt aaggatattg atgtccattc ccgtactcta cgcgccagag
    32581 ggaaattcac ctggcgcgta tttttgttcg cggcttagct acggctgagc acaccgcggc
    32641 gatagagatt acgtttaatg cgcgttaaac caggttttgg cttacgcggt tcgtccaggc
    32701 ttgccaggac aatctccagc acacgctctg cgacatcgcg gtgacgttga gccactgcca
    32761 gcaccgggca ctgtaagaag tcgagcagtt cgttatcgcc aaaggtggca attgccaggt
    32821 cagaaggcag tttaccatcg cgacgtagcg tgacatccat caccccttgc aacaacgcaa
    32881 acgacgttgt gaacagcgcc tgcggcatcg gatgcgtttc cagccatttt tcgaataact
    32941 gggcagccgc ctcccgctca tagctgttgg catacaggaa atgcacttcg cgcggatcat
    33001 ctttccaggc agtacggaaa ccttgttcac gcaggaagct gacagaaagc tccggcagcg
    33061 cgccaagata aagcaccgtc tcggcgggaa acttacgtaa ctcttccgcc agcatttcgg
    33121 catcatcctg atcggcacca accacgctgg tgaagtgttc acgatcgagg gcgcggtcca
    33181 gcgcgacaat cgggaacggg tcgttagccc agcgttgata aaaaggatgc tcaggaggca
    33241 acgacgtcga aacaataatg gcatcgacct gacgctgtaa aaggtgctca atacagcgca
    33301 tttcgttgtc tggctgatct tctgagcagg caattagcag ttgataaccc cgttgccgcg
    33361 cctggcgttc aagatagtta gcgatgcggg tatagctggt gttctccaga tcggggatca
    33421 caagaccaat agaacgtgtg cgtccagcac gaagcccagc tgccacggcg ttcgggtggt
    33481 aattgtgctc acgcaccaca gccatgactt tttcaacggt tttgtcgctc acacggtatt
    33541 gcttcgcttt gccgttaata acatagcttg cagtggtccg cgacactccc gccagccgag
    33601 cgatttcatc cagtttcaca attgcccctt gcgtaaaatg taaaaaccat agccattgta
    33661 ctggtatggg ttaaattcat taacatctaa gcgcagaaaa ttaactgcgg caactgcttt
    33721 tattccaggt tcccactgat ttcgcaaaaa aagcccaacg tgacatgttg ggctgcaaat
    33781 tgcgcactga gatcattctc aacgcattat tttatcgccg cgcgaaagtc cgaccacacc
    33841 agagcgagca acttccacaa ttttcgccac atcgcgaatc gatgctaaaa atgcatcaag
    33901 cttatcgctg gtgcctgcta attgaacggt ataaagcgag ggggtgacat cgataatttg
    33961 cccacggaat atttccgtat tacgtttcac ttcgtcacgc ccgtaaccgc tggcctgaat
    34021 tttcaccagc atgatttccc gctcaacatg cgcgccctgc cccaactcac tcacgcgcaa
    34081 gacatcgacc agcttgtgta attgcttttc gatctgctca agcacttttt catcgcccac
    34141 ggtctggatg gtcatacgcg ataatgtcgg atcgtcggtt ggcgcaacgg tcaggctttc
    34201 aatgttgtag ccacgctggg aaaaaaggcc aatcacgcgg gataacgcgc ctgattcatt
    34261 ttcgagtaag actgataata tccggcgcat aatcaggttc tctccgtttt gcttaaccac
    34321 atttcatcca ttccgccccc gcgaatctgc atcgggtaga cgtgctcact gccatcgacg
    34381 gtaacatcaa caaacaccag gcgattattg cgcacctgtt ccagcgcctc gctaagtttg
    34441 ctttccagct catgcggatg agagatctgg atcccgacgt gaccataggc ttccgccaga
    34501 cggacgaaat cgggtagtga ttgcatataa gattgtgaat gacggccgga atagatcatg
    34561 tcctgccact gtttcaccat ccccagatag cggttattga gattcaccac cagtaccggc
    34621 aactcgtatt gcaacgcggt agacagttcc tggatgttca tctgaatact gccgtcgcca
    34681 gtgacgcaaa ccacggtttc ttctggcaac gccattttga cgcccagtgc cgcaggtaaa
    34741 ccaaaaccca tcgtgccgag gccaccggaa ttgatccagc gacgcggttt gtcgaatgga
    34801 taataaagag cagcaaacat ctggtgctgc ccgacatcgg acgtcacgta agcgtctccc
    34861 ttcgtcaacc gccaaagagt ctcgatcacc gcctgcggtt taatcttttc actgtgagtg
    34921 tcatatttca ggcactgacg agcgcgccac tgttcaattt gctgccacca gtcgcggatc
    34981 tcatccagtg gttgatgggc ggattcttgc gacaagagtt caagcatttg ttcgaggacc
    35041 tggcgagcat cccccacaat cgggatatcc gcagtcacgg ttttagaaat ggaagtagga
    35101 tcaatatcga tatgcagaac agtggcattt gggcagtact ttgccagatt gttcgtcgtt
    35161 cggtcatcaa atcgtacccc gacggcgaaa atcacatccg cgttatgcat cgtcatattg
    35221 gcttcgtagg taccgtgcat tcccagcatg cccagtgcct gacgatgcgt tgccggaaac
    35281 gcccccagcc ccatcaatga ggaaacaacg ggcagattca acgcctccac cgtttctttc
    35341 aactgctgat ggcagcccgc catgattgcc ccaccgccta cgtagacaac cggttttttt
    35401 gccgctacca gcgtttgcag agcgcgctta atttgccctt tatgtccggt agtagtggga
    35461 ttgtaagaac gcatactgac cgactcaggc cagacatagg gtaatttgtt cgccggatta
    35521 agaatatctt tcggtaaatc aacgaccact ggtcctgggc gaccacttgc cgccagccag
    35581 aaagcctttt tcagcacctg cggaatgtct tccgtttgct taaccagaaa actgtgttta
    35641 accaccggtc gcgaaatccc caccatgtcg cactcctgaa aggcatcgta acctatcaac
    35701 gaggtcgcta cctgcccgga aaggacaact aatggaatgg aatccatata agcggtggcg
    35761 atgccggtaa tcgcattggt cgcccctgga cccgacgtta ccagcacgac gccgacttcc
    35821 ccggtcgcgc gcgccagacc atcggccata tgcactgccg cctgctcatg acgaactaaa
    35881 acatgatcga taccacccac ggtatgcaat gcatcgtaaa tatcaaggac tgcgcctccg
    35941 ggataaccga atacttgttt aacgccctga tcgataagcg atcggacgac catctcggct
    36001 ccagacaaca tctccatggc ctgcctcact gtttgacgga aaaaatgtgt aaaacacatt
    36061 aaccgtccga tcttgcttaa gcaattggca gccagagaca taaacgcagg gtaataagaa
    36121 taaacaggag gaaaggtgaa aagaaacgat aaaatcctcc attacgaagg attaaattga
    36181 taataaatcg gctgaatccc acaactt
//
LOCUS       DAPGWB010000028        35651 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.028, whole genome shotgun sequence.
ACCESSION   DAPGWB010000028 DAPGWB010000000
VERSION     DAPGWB010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 35651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35651
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.028"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..876
                     /locus_tag="RHX79_001399"
     CDS             <1..876
                     /locus_tag="RHX79_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HDV2196593.1"
                     /translation="ATNSTSETQAATPKAVKAVYDLANGKQPADATLTALAGLATAAD
                     KLPYFTGNDTTSLTTLTNVGRNILDKASTQAVIQYLGLSDASGYVGRWLNTRVFTSSG
                     TYTPTPGTKRIRVTITGGGGGGGGCKATSNNETFFGAGGGAGGTIISIITPTQNSYPV
                     TIGAGGAGGVSATNGTSGGNSVFASLIAPGGAGGGKVGVTNTNGGNGGVPSTGDIRIT
                     GGNGGDGQSGNIGVSGEGGTSHWGGGGRAGAGGGVSGKAYGSGGGGAYDAGYSGTSMT
                     GGKGAAGICIIEEFA"
     gene            876..1289
                     /locus_tag="RHX79_001400"
     CDS             876..1289
                     /locus_tag="RHX79_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HDV2196594.1"
                     /translation="MNASYAVIENGMVVNVIVWDGEAEFTVPDNQQLIDISDISEHPG
                     IGWGYSDGVFTAPLPPERSHNELVADAEQKKQSLIDAAMANISVIQLKLHAGRKLTQE
                     ETTRLNVVLDYIEAVTATDTSTAPDIIWPVFPASR"
     gene            1396..2568
                     /locus_tag="RHX79_001401"
     CDS             1396..2568
                     /locus_tag="RHX79_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HDV2196595.1"
                     /translation="MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFP
                     LNKPVLITDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIG
                     AVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDNKAVATELLGVAQSLRGFAYLSAY
                     GCKTVQEAITYRKNFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTG
                     WHKSLSNVGVNGVTGISADVFWDLQDPATDAGLLNQNDVTTLIRKDGFRFWGSRCLSD
                     DPLFAFENYTRTAQVLMDTMAEAPMWAVDKPLNPSLARDIIEGIRAKMRSLISQGYLI
                     GGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFASQVSA"
     gene            2578..3093
                     /locus_tag="RHX79_001402"
     CDS             2578..3093
                     /locus_tag="RHX79_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDV2196596.1"
                     /translation="MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMP
                     GAVDVDLGLDDSALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAV
                     ELVVRGRHKEVDSGEWKTGESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVD
                     LMEAHRNALGL"
     gene            3148..3450
                     /locus_tag="RHX79_001403"
     CDS             3148..3450
                     /locus_tag="RHX79_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDV2196597.1"
                     /translation="MSDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAI
                     MDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA"
     gene            3465..3584
                     /locus_tag="RHX79_001404"
     CDS             3465..3584
                     /locus_tag="RHX79_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDV2196598.1"
                     /translation="MADIATIFHWPPSVTDVMPLTEVLEWRYKAIQRSGANDE"
     gene            3577..6654
                     /locus_tag="RHX79_001405"
     CDS             3577..6654
                     /locus_tag="RHX79_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDV2196599.1"
                     /translation="MSDNNLRLQVILNAVDKLTRPFRAAQASSKELAGAIRNSRDALK
                     QLNQAGNSLEKFRKLQADNKKLGDRLNYARQKANLLSSELEAMEQPSQRHLVALGRQT
                     LAVQRLEEQQKYLQKQTALVRAELYRAGISAKDDAGATARLARETSRYNQELSKQEAR
                     LKRLGEAQRRMNAARASYARSLEVRDRIAGAGATTTAAGLAMGAPVMAAVKSYTSMED
                     AMKGVAKQVNGLRDDNGNRTARFYEMQDAIKAASEQLPMENGAVDFAALVEGGARMNV
                     ANPDDSWEDQKRDLLAFASTAAKAATAFELPADELSESLGKIAQLYKIPTRNIEQLGD
                     ALNYLDDNAMSKGADIIDVMQRLGGVADRLDYRKAAALGSTFLTLGAAPEVAASAANA
                     MVRELSIATMQSKSFFEGMNLLKLNPEVIEKQMTKDAMGTIQRVLEKVNALPQDKRLS
                     AMTMLFGKEFGDDAAKLANNLPELQRQLKLTAGNDALGSMQKESDINKDSLSAQWLLV
                     KTGAQNTFSSLGETLRQPLMDILYTVKSITGALRRWVEANPELTGTLMKVAAVVAAVT
                     VGLGTLAVALAAVLGPLAVIRLGFSVLGIKTLPSVTAAVTRISSALSWLAGAPLALLR
                     RGLASSGNAAGLLTAPLSSLRRTASLTGNVLKTVVGVPVALLRSGLSGLRAVAVMFMN
                     PLAALRGGLAAAGAVLRVLASGPLAMLRVALYAISGLLGALLSPIGLVVTALAGVALV
                     VWKYWQPITAFLAGVVEGFKAAAGPISAAFEPLKPVFQWIGDKVQALWGWFTDLLTPV
                     KSTSAELQSAAAMGRRFGEALAEGLNMVMHPLDSLKSGVSWLLEKLGIVSKEAAKAKL
                     PERVTRQQPATVNADGKVMMPSGGFPSWGYGFAGMYDSGGYIPCGQFGIVGENGPEIV
                     NGPANVTSRRNTSALAAVVAGMMGVAAAPAELPPLHPLALPAKGGEAMVSRAATVPPV
                     QRIEAPTQIIIQTQPGQSAQDIAREVARQLDERERRLKAKARSNYSDQGGYDA"
     gene            6651..7136
                     /locus_tag="RHX79_001406"
     CDS             6651..7136
                     /locus_tag="RHX79_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2196600.1"
                     /translation="MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLG
                     PENDMLTLSGVLMPEITGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTK
                     TEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQGTATSALSDISKTVGGLL
                     S"
     gene            7133..8233
                     /locus_tag="RHX79_001407"
     CDS             7133..8233
                     /locus_tag="RHX79_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HDV2196601.1"
                     /translation="MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLIGLTLTDNRG
                     FEADQLDLELDDADGKIVLPRRGAVITLALGWKGQPLFPKGAFTVDEIEHTGAPDRLT
                     IRARSADFRETLNTRREKSWHNTTIGEVVKEIAARHKLKMALGKELSDKPVEHIDQTN
                     ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSATGKPLPVITITRKDGDSHRFTL
                     ADRGAYTGVIASWLHTREPAKKESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVL
                     NRTYANRGNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAE
                     WTITTLTHTVSPDNGFTTSLELEVRIDDFEME"
     gene            8324..8542
                     /locus_tag="RHX79_001408"
     CDS             8324..8542
                     /locus_tag="RHX79_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001504085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HDV2196602.1"
                     /translation="MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHET
                     FVRSIATPKESNPVQPHPMKSGQVALSL"
     gene            complement(8778..10463)
                     /locus_tag="RHX79_001409"
     CDS             complement(8778..10463)
                     /locus_tag="RHX79_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate:alanine antiporter"
                     /protein_id="HDV2196603.1"
                     /translation="MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL
                     VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS
                     ALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLS
                     LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY
                     RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP
                     DAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRV
                     IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVI
                     GLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLM
                     VFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGA
                     MMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG"
     gene            10733..11110
                     /locus_tag="RHX79_001410"
     CDS             10733..11110
                     /locus_tag="RHX79_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YbjM"
                     /protein_id="HDV2196604.1"
                     /translation="MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLF
                     FILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFW
                     CALGALCFLFISSLFKPQHRKNQ"
     gene            complement(11140..11397)
                     /gene="grxA"
                     /locus_tag="RHX79_001411"
     CDS             complement(11140..11397)
                     /gene="grxA"
                     /locus_tag="RHX79_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 1"
                     /protein_id="HDV2196605.1"
                     /translation="MQTVIFGRPGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGIT
                     KEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA"
     gene            11557..11844
                     /locus_tag="RHX79_001412"
     CDS             11557..11844
                     /locus_tag="RHX79_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1418 family protein"
                     /protein_id="HDV2196606.1"
                     /translation="MRAIGKLPKSVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEV
                     QILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH"
     gene            11828..12550
                     /gene="nfsA"
                     /locus_tag="RHX79_001413"
     CDS             11828..12550
                     /gene="nfsA"
                     /locus_tag="RHX79_001413"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase NfsA"
                     /protein_id="HDV2196607.1"
                     /translation="MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQ
                     CSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL
                     LGVVDTAMMAQNALIAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWP
                     ADNPDLKPRLPASILVHENSYQPLDKGALAQYDEQLAEYYLTRGSNNRRDTWSDHIRR
                     TIIKESRPFILDYLHKQGWATR"
     gene            12611..13513
                     /gene="rimK"
                     /locus_tag="RHX79_001414"
     CDS             12611..13513
                     /gene="rimK"
                     /locus_tag="RHX79_001414"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6--L-glutamate ligase"
                     /protein_id="HDV2196608.1"
                     /translation="MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA
                     ASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLR
                     SMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAA
                     ESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGG
                     AASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGI
                     DIAGKMIRWIERHATTEYCLKTGG"
     gene            13601..14077
                     /locus_tag="RHX79_001415"
     CDS             13601..14077
                     /locus_tag="RHX79_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HDV2196609.1"
                     /translation="MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF
                     DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC
                     QSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH"
     gene            14428..15540
                     /gene="potF"
                     /locus_tag="RHX79_001416"
     CDS             14428..15540
                     /gene="potF"
                     /locus_tag="RHX79_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotF"
                     /protein_id="HDV2196610.1"
                     /translation="MTALNKKWLSGLVAGALMAVSVSTLAAEQKTLHIYNWSDYIAPD
                     TVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD
                     KSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSW
                     DLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLR
                     PNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAF
                     FDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPG
                     IYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK"
     gene            15635..16768
                     /gene="potG"
                     /locus_tag="RHX79_001417"
     CDS             15635..16768
                     /gene="potG"
                     /locus_tag="RHX79_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter ATP-binding subunit
                     PotG"
                     /protein_id="HDV2196611.1"
                     /translation="MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYK
                     GEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYAL
                     FPHMTVEQNIAFGLKQDKLPKAEIATRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVAL
                     ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG
                     RIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGVLKERHEDGLVLYSPGLV
                     HPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHV
                     RLKSGQMISAQLQNAHRHRKGLPTWGDEVRLCWEVDSCVVLTV"
     gene            16778..17731
                     /gene="potH"
                     /locus_tag="RHX79_001418"
     CDS             16778..17731
                     /gene="potH"
                     /locus_tag="RHX79_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotH"
                     /protein_id="HDV2196612.1"
                     /translation="MSTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLF
                     LLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQS
                     LQVAVISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN
                     NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAA
                     LDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ
                     EFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG"
     gene            17728..18573
                     /gene="potI"
                     /locus_tag="RHX79_001419"
     CDS             17728..18573
                     /gene="potI"
                     /locus_tag="RHX79_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotI"
                     /protein_id="HDV2196613.1"
                     /translation="MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW
                     AGWSTRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGF
                     AFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS
                     SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV
                     SGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQ
                     RARHG"
     gene            18633..19121
                     /locus_tag="RHX79_001420"
     CDS             18633..19121
                     /locus_tag="RHX79_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjO family protein"
                     /protein_id="HDV2196614.1"
                     /translation="MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIF
                     NTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQI
                     TAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQ
                     LQ"
     gene            19162..20289
                     /gene="rlmC"
                     /locus_tag="RHX79_001421"
     CDS             19162..20289
                     /gene="rlmC"
                     /locus_tag="RHX79_001421"
                     /EC_number="2.1.1.189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HDV2196615.1"
                     /translation="MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEW
                     CAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALK
                     PFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQE
                     QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVA
                     SQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIASEAIACAKQSAA
                     ELGLTRLQFQALDSTQFATAQGEVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSC
                     NAQTMAKDIRELPGYRIERVQLFDMFPHTAHYEVLTLLVKQ"
     gene            complement(20464..21195)
                     /gene="artJ"
                     /locus_tag="RHX79_001422"
     CDS             complement(20464..21195)
                     /gene="artJ"
                     /locus_tag="RHX79_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein ArtJ"
                     /protein_id="HDV2196616.1"
                     /translation="MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIV
                     GFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTT
                     PYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
                     IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLE
                     KLNNALAAIKADGTYQKINDQWFPQ"
     gene            complement(21487..22155)
                     /gene="artM"
                     /locus_tag="RHX79_001423"
     CDS             complement(21487..22155)
                     /gene="artM"
                     /locus_tag="RHX79_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HDV2196617.1"
                     /translation="MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVL
                     VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNS
                     AAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFK
                     STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAF
                     ERRN"
     gene            complement(22155..22871)
                     /gene="artQ"
                     /locus_tag="RHX79_001424"
     CDS             complement(22155..22871)
                     /gene="artQ"
                     /locus_tag="RHX79_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HDV2196618.1"
                     /translation="MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVA
                     WAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVS
                     PFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH
                     ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLL
                     SQYILKRIDLRATRFERRPS"
     gene            complement(22878..23609)
                     /gene="artJ"
                     /locus_tag="RHX79_001425"
     CDS             complement(22878..23609)
                     /gene="artJ"
                     /locus_tag="RHX79_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV2196619.1"
                     /translation="MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIV
                     GFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTT
                     PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAK
                     LDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQ
                     KLNTALEKVKKDGTYETIYNKWFQK"
     gene            complement(23627..24355)
                     /gene="artP"
                     /locus_tag="RHX79_001426"
     CDS             complement(23627..24355)
                     /gene="artP"
                     /locus_tag="RHX79_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HDV2196620.1"
                     /translation="MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSL
                     LRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQN
                     LIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
                     QVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGH
                     IVEQGDASCFTEPQTEAFKNYLSH"
     gene            complement(24573..25088)
                     /locus_tag="RHX79_001427"
     CDS             complement(24573..25088)
                     /locus_tag="RHX79_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV2196621.1"
                     /translation="MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNV
                     AQQFYDYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPES
                     ARVASASTIPNRDARNIPLRVDLKQGDQSWQDEVLMIQEGQCWVIDDVRYLGGSVHAT
                     AGTLRQSIENR"
     gene            25214..25537
                     /locus_tag="RHX79_001428"
     CDS             25214..25537
                     /locus_tag="RHX79_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HDV2196622.1"
                     /translation="MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVG
                     GRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTA
                     VKTRR"
     gene            25534..26364
                     /gene="amiD"
                     /locus_tag="RHX79_001429"
     CDS             25534..26364
                     /gene="amiD"
                     /locus_tag="RHX79_001429"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiD"
                     /protein_id="HDV2196623.1"
                     /translation="MRRVFWLIAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRI
                     KVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI
                     SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP
                     ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL
                     LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD
                     "
     gene            complement(26361..27374)
                     /locus_tag="RHX79_001430"
     CDS             complement(26361..27374)
                     /locus_tag="RHX79_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415389.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDV2196624.1"
                     /translation="MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMG
                     AEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV
                     AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQ
                     TRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLA
                     SQEACDKLPSGRVYNITNGEHRTLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMER
                     LGRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDHGK
                     LPR"
     gene            complement(27473..28903)
                     /locus_tag="RHX79_001431"
     CDS             complement(27473..28903)
                     /locus_tag="RHX79_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2867 domain-containing protein"
                     /protein_id="HDV2196625.1"
                     /translation="MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQL
                     ANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVP
                     VKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR
                     DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQ
                     FEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTAL
                     RALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKT
                     SASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVD
                     SWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWL
                     LMIPAHLFIFRGMAKQIARLAEQSTD"
     gene            complement(28914..29915)
                     /gene="ltaE"
                     /locus_tag="RHX79_001432"
     CDS             complement(28914..29915)
                     /gene="ltaE"
                     /locus_tag="RHX79_001432"
                     /EC_number="4.1.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low-specificity L-threonine aldolase"
                     /protein_id="HDV2196626.1"
                     /translation="MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAA
                     ELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQP
                     IDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN
                     LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAI
                     RWRKMAGGGMRQSGILAAAGMYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTN
                     MLFVRVGEENAAALGEYMKARNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR"
     gene            complement(29952..31670)
                     /gene="poxB"
                     /locus_tag="RHX79_001433"
     CDS             complement(29952..31670)
                     /gene="poxB"
                     /locus_tag="RHX79_001433"
                     /EC_number="1.2.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HDV2196627.1"
                     /translation="MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEW
                     MSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHI
                     PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLP
                     GDVALKPAPEGATTHWYHAPQPIVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKE
                     LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQF
                     PYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKTDRKFLDK
                     ALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK
                     MNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMK
                     LPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVD
                     EALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA
                     KTNWLR"
     gene            complement(31803..32771)
                     /gene="hcr"
                     /locus_tag="RHX79_001434"
     CDS             complement(31803..32771)
                     /gene="hcr"
                     /locus_tag="RHX79_001434"
                     /EC_number="1.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH oxidoreductase"
                     /protein_id="HDV2196628.1"
                     /translation="MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYAL
                     VSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMG
                     EFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEW
                     RNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALG
                     VTRFFKEKFFTPVAEAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAG
                     VCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA"
     gene            complement(32783..34435)
                     /gene="hcp"
                     /locus_tag="RHX79_001435"
                     /gene_synonym="priS"
     CDS             complement(32783..34435)
                     /gene="hcp"
                     /locus_tag="RHX79_001435"
                     /gene_synonym="priS"
                     /EC_number="1.7.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
                     /protein_id="HDV2196629.1"
                     /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG
                     LSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQC
                     LAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK
                     GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSIL
                     DAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP
                     AHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRS
                     IVGWPGVRHLDGEDFSAVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS
                     REKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLP
                     RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK
                     NIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA"
     gene            complement(34579..35478)
                     /gene="lysO"
                     /locus_tag="RHX79_001436"
     CDS             complement(34579..35478)
                     /gene="lysO"
                     /locus_tag="RHX79_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415395.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lysine exporter LysO"
                     /protein_id="HDV2196630.1"
                     /translation="MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFM
                     GISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRI
                     AMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQ
                     IVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFG
                     PVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMV
                     PAAIVHGFILSLLVPILIAFFSA"
BASE COUNT         8599 a         9032 c         9700 g         8320 t
ORIGIN      
        1 gccactaaca gcacgtcaga aacgcaggct gccacaccaa aagccgtgaa ggctgtatat
       61 gaccttgcca atggaaaaca acctgccgac gccacactga ccgcactggc aggccttgcc
      121 actgcggcag acaaacttcc gtattttacg gggaatgata caaccagcct gacaaccctg
      181 actaacgttg gacggaatat tctggataaa gcaagcacac aggcggttat tcaatatctt
      241 ggtctgagcg atgcaagtgg atacgttgga cgctggctga atacccgggt tttcacctca
      301 tcaggtacgt acaccccgac gccaggaaca aaacggatca gggtcacaat aacgggcggc
      361 ggtggcggag ggggcggctg caaggctaca tccaataatg aaacgttttt cggtgctggc
      421 ggtggggccg gtggaacaat aatttcaata attaccccga cacagaatag ttatccagtc
      481 actatcggcg caggtggggc cggtggtgtt agtgcgacga acggcaccag tggcgggaat
      541 agcgtatttg catcgttaat tgctcctggt ggcgcaggtg gcgggaaagt gggagttaca
      601 aacacaaacg gcggtaacgg aggtgtgccg agtactggcg atatccgcat cactggtgga
      661 aatggaggcg acggtcagtc cggaaatatc ggcgtcagcg gtgaaggcgg aacatcgcac
      721 tggggcggcg gtggacgcgc aggcgctggc ggtggtgtta gtggtaaggc atatggttca
      781 ggtggcggtg gcgcatacga tgccggttat agcggaacca gtatgacagg cgggaaaggt
      841 gctgctggga tttgtattat cgaggagttt gcataatgaa tgcgtcatat gcagttattg
      901 aaaatgggat ggttgtgaat gtcattgtct gggatggcga ggctgaattc acagtgccgg
      961 ataatcagca gctcattgat atttctgata tcagtgagca tccaggaatt ggctgggggt
     1021 attcagacgg ggtatttact gcgccgctcc ctccggaacg ttctcataat gaactggtag
     1081 ctgacgctga acagaaaaaa cagtcgctga tagacgcagc aatggccaat atcagcgtga
     1141 ttcagttaaa gctgcatgcc gggcgcaaac tgacgcaaga agaaactacc cgacttaacg
     1201 ttgtgctgga ttatatcgag gctgtgacgg caacagatac cagcaccgca cctgatatca
     1261 tttggcctgt tttccctgca agcagataaa taccgtcatt ttgtgtgaat aacggtacaa
     1321 ctgcgcttag ctgcttgtca gacacaatca cttcaacata gggcgaagcc taatccaatc
     1381 aggaggttcg ccactatggc tcaggattac caccacggag tgcgcgttgt tgaagtcaac
     1441 gaaggcactc gatccattac tacggtgagc accgccatcg tgggcatggt ctgcacgggc
     1501 gatgatgccg atgcaaaaat gttccctctt aataaacccg tgctgatcac tgatgtgctt
     1561 actgccagcg gtaaagcggg tgagtcaggt acgctggccc gttcgctgga tgccatcgct
     1621 gaccaggcaa aacccgtgac cgttgttgtg cgtgtgccgc agggtgaaac ggaagaagaa
     1681 accacgacca atatcatcgg cgcagtgact gctgaaggta aaaaaactgg tatgaaagcc
     1741 ctgttatctg cccagtcaca gctcggtgtt aaaccgcgca ttctcggcgt gccggggcac
     1801 gataacaaag ccgttgctac tgagttgctg ggcgtggcgc aaagcctgcg tgggtttgct
     1861 tacctgtcag cgtatggttg caagacggtg caggaagcaa tcacttaccg taaaaatttc
     1921 agccagcgtg aagggatgct gatctggccc gactttactg gctgggacac ggtgctgaat
     1981 gccgaagcaa cggcatatgc caccgcccgt gcgcttggtc tgcgcgccaa aattgatgag
     2041 cagaccggat ggcacaaaag cctgtccaac gtgggcgtga acggtgtcac cggaatttct
     2101 gctgatgtat tctgggatct gcaggacccg gcaactgatg cgggactgct taaccagaac
     2161 gatgttacca cacttatccg caaagacggc tttcgcttct ggggttcccg ctgtctgagt
     2221 gatgacccac tctttgcctt tgaaaactac acccgcacgg cgcaggtgct gatggacacg
     2281 atggcagaag cgccaatgtg ggcggtcgac aaaccgctga atccgtcgct ggcccgcgac
     2341 attatcgaag gtatccgcgc caaaatgcgc agcctgatca gtcagggcta tctcattggt
     2401 ggcgattgct ggctggatga gtcggtgaac gacaaagaca ctctgaaagc tggaaaactc
     2461 accatcgact acgactacac accagtgccg ccacttgaaa acctgatgct gcgtcagcgc
     2521 atcaccgatc agtacctggt gaatttcgcc agccaggtca gcgcgtaagg ggacaacatg
     2581 gctttaccac gcaaattaaa acacctgaac ctgtttaacg acgggaacaa ctggcagggg
     2641 atcgttgagt cgctgacgct gccgaaattc acccgcaaat atgagaagta tcgcggcggc
     2701 ggaatgccgg gagcagtgga tgtggatctg gggcttgatg acagtgcgct ggacacagaa
     2761 ttttccattg gtggtactga actgctgctg tttaagcaga tgggcaaagc cacggtggat
     2821 ggcatccagt tgcgctttac cggctctatc cagcgtgatg ataccgggga agtgcaggcc
     2881 gtggagcttg tggtgcgtgg acgtcacaaa gaagtggatt ccggcgagtg gaagacgggc
     2941 gaaagcaata ccaccaaagt gaccagtacc aacagctacg cgaagctgac tatcaatggt
     3001 gaggtgctct atgaagtgga ccttatcaac atggtggaaa ttgtggacgg tgtggacctg
     3061 atggaagcgc accgcaacgc cctcggcctc tgatgtatct gaacggcgcg gaatgccgcg
     3121 ccagaaccta atttacagga cagcaaaatg agcgataagc agactgaaaa gaccattcaa
     3181 ctggataccc ccatcatgcg tggtaaaact gaaatcaccg aaattgtgct gcgtaaaccg
     3241 cagtccggtg cgctgcgcgg tacacgcctg caggccatta tggatatgga tgtgaacgcg
     3301 atgatgaccg tgatcccccg catctccagc ccggcgctga ctgcacagga aattgcagag
     3361 atggacccgg cagatctcac tgccatgtcg gttgaggttg tcactttttt gttgaagaag
     3421 tcggtgcttg ccggtttacc gacagcctga cggttgacga tctggtggca gatatcgcca
     3481 ccatttttca ctggccgcca tccgttactg acgttatgcc gctgaccgaa gtgctggaat
     3541 ggcggtataa agcgattcag agaagcgggg ccaacgatga gtgataataa cctgcgcctg
     3601 caggtcattc ttaatgcggt tgacaaactc acccgcccat tccgtgctgc acaggccagt
     3661 tcgaaagagc tggctggcgc aatcagaaac tcccgtgacg cattaaagca actcaatcag
     3721 gcgggtaaca gcctggaaaa atttcgcaag ctgcaggccg ataacaaaaa gttaggcgac
     3781 aggctgaact atgccagaca gaaggcaaat ttgcttagtt ctgagctgga agcgatggaa
     3841 caaccatcac aaaggcatct tgtggcttta ggtcggcaaa cgctggcagt ccaacgcctg
     3901 gaagaacaac aaaaatattt gcagaagcaa acggcgcttg tgcgtgcaga actgtaccgg
     3961 gcgggaattt ctgcgaaaga tgatgcggga gcaactgccc gtttagcccg tgaaacatca
     4021 cgttataacc aggaactttc gaaacaagag gcgcggctga agcgactggg ggaagctcag
     4081 cgcaggatga atgcggcgcg tgccagttat gcccgttcgc tggaggtgcg tgatcgtatt
     4141 gcaggtgccg gagccaccac cacggctgca gggctggcaa tgggcgcacc agtgatggcg
     4201 gcagtaaaaa gctataccag catggaagat gccatgaaag gtgtagcaaa gcaggtcaat
     4261 ggtctgcgtg acgataatgg caaccgcacc gcgcgttttt acgaaatgca ggatgccatc
     4321 aaggctgcca gcgaacagtt gccgatggaa aacggtgctg tggactttgc cgcactggtt
     4381 gaaggtggtg cgcgcatgaa cgtcgcaaat cctgacgaca gctgggaaga ccagaaacgt
     4441 gacctgctgg ccttcgccag cacggccgca aaggcggcaa cagcctttga gctgccagcg
     4501 gatgaactgt cagaaagtct ggggaaaatc gcccagctct acaaaatccc tacccgcaat
     4561 attgaacagc tcggtgatgc gctgaactat ctggatgata acgccatgtc gaaaggggca
     4621 gacatcattg atgtcatgca acgcctgggc ggtgtggctg atcgtctgga ttatcgtaaa
     4681 gcggcggcgc tgggttccac ctttctgaca ctgggcgctg cgccagaggt tgcagccagt
     4741 gcagcaaacg cgatggtgcg tgaattgtcc attgccacca tgcaaagcaa gagtttcttt
     4801 gaagggatga atctgctgaa actcaatcct gaagtgattg aaaagcagat gacgaaggat
     4861 gcgatgggaa ctatccagcg tgtgctggag aaggtgaacg cactgccgca ggacaagcgt
     4921 ctgtctgcca tgaccatgtt gtttggtaaa gagtttggcg atgacgcggc gaaactggca
     4981 aacaacctgc cggaactaca gcgccagcta aaactgacag cgggcaatga tgcgctcggt
     5041 tccatgcaga aagaatccga catcaacaaa gactcacttt ccgctcagtg gttgctggtc
     5101 aaaaccggag cgcagaacac cttcagcagc ctgggcgaaa cgctgcgcca gccgctgatg
     5161 gatattctgt acacggtgaa aagcatcacg ggggcgttgc gccgctgggt ggaagctaac
     5221 ccggaactga caggcacact gatgaaagta gcggctgttg tggctgcggt taccgtaggc
     5281 ctcggcacct tagcggtggc gctggctgca gtgctggggc cgctggcagt catccgtctg
     5341 ggattctctg tgctgggtat caaaacgtta ccttccgtta cggcagcagt aacacgaatc
     5401 agcagcgcgt tgtcctggct ggctggcgct ccactggcac tgctgcgacg cgggcttgct
     5461 tcatcgggca acgcagcggg tttacttact gcgccgttgt cgtctttgcg ccgcacggca
     5521 tcactgacgg ggaatgtcct gaaaactgta gtaggtgtgc cggttgcact gttgcggtct
     5581 ggattatccg gtttacgtgc tgttgctgtg atgtttatga atccactggc agcactacgc
     5641 ggtggactgg ctgccgcagg cgcggtgctg cgagtactgg catccggtcc gctggcgatg
     5701 ctgcgcgttg ccctgtatgc catatctggt ctgttaggtg ctctgctcag tccgataggt
     5761 cttgtggtta ctgcactggc gggcgtagcg ctggttgtct ggaaatactg gcaacccatc
     5821 accgcatttc tcgctggtgt ggtggaagga ttcaaagcgg cggcaggtcc catcagtgca
     5881 gcattcgaac cacttaagcc tgtgtttcag tggattggcg acaaagtgca ggcgttgtgg
     5941 ggctggttta ctgatctgct gacgcccgtt aagtcgacct ctgccgaact gcagagcgca
     6001 gcggcaatgg ggcgacgatt cggggaggca ctggcggaag ggctaaatat ggtcatgcat
     6061 ccgctggact ccctgaaatc cggcgtttcc tggttgctgg agaaactcgg cattgtcagt
     6121 aaagaggctg caaaggcgaa actgccggaa agagtgacgc gtcagcaacc tgcgacggtg
     6181 aatgcagacg gtaaagtgat gatgccatcg ggtggttttc catcatgggg atatggcttt
     6241 gcggggatgt atgacagcgg cgggtatatc ccgtgcgggc agtttggcat tgtcggtgaa
     6301 aacgggcctg aaattgtcaa cggcccggca aacgttacca gccggagaaa tacctctgca
     6361 ctggctgcgg ttgtcgccgg aatgatgggc gttgctgccg cgccagcaga gcttccaccg
     6421 ttacatcctt tggcacttcc cgcgaaaggc ggcgaagcga tggtgagtcg tgcagccact
     6481 gtgccgcccg ttcaacggat tgaggcaccg acgcagatca tcattcagac gcagccagga
     6541 caaagtgcgc aggatattgc gcgggaggtg gcccgccagc ttgatgaacg tgaacgcagg
     6601 ctgaaggcaa aagccaggag taactacagc gatcaggggg gatacgacgc atgatgatgg
     6661 tgctgggatt gtacgtgttt atgctgcgca ccgtgccgta tcaggaactg cagtatcaac
     6721 gcagttggcg acatgcggca aacagccggg taaaccgtcg tccgtccacg cagtttctgg
     6781 gaccggaaaa cgacatgctg acgctttccg gtgttcttat gccggagata acaggcggca
     6841 ggctgtcgtt gctggcactt gagcagatgg cagaacaggg gaaagcatgg cctctgattg
     6901 aaggcagcgg cacgatttac ggcatgtatg tgattgaggg actgaatcag actaaaacgg
     6961 agtttttccg cgacggtatg ccgcgccgga ttgagttcac cctgtcgctc aaacgggtgg
     7021 atgaatccct gtccgatatg ttcggtgatc tcagtgcgca gctgaataat ctgcagggaa
     7081 cggcaacatc tgccttaagc gatatcagta aaacggtggg agggcttctg tcgtgaattt
     7141 cagctctgaa ctgcttaaca aaggcaacaa aactccggca ttcagcatca gtattgaagg
     7201 cagggatatc accactgtgc tggacaaccg cctgattggg ctgacgctga cggataaccg
     7261 gggatttgaa gcggaccagc ttgatctgga gctggacgac gccgatggaa aaatcgtgct
     7321 gccgcgccgt ggtgcggtca ttacgctggc gctgggctgg aaggggcagc cgcttttccc
     7381 gaaaggggca ttcacggtgg acgagattga acacactggc gcaccggacc gcctgactat
     7441 ccgggcgcga agtgctgatt ttcgggaaac cctgaatacc cgccgtgaaa aatcgtggca
     7501 taacaccacc atcggggaag tggtgaagga aatagccgcg cggcacaagc tgaagatggc
     7561 actgggtaaa gagctgtcgg ataagcccgt ggagcatata gaccagacta atgagagtga
     7621 cggcagtttt ctgatgcgac tggcgcgaca gtacggtgcc atcgcgtcgg tgaaaaatgg
     7681 caatctgtta ttcatccggc aggggcaggg caaaagcgcc actggtaaac cactgccagt
     7741 gatcactatc acacgcaagg acggcgacag tcaccgattt accctggcag atcgcggagc
     7801 ctacacgggc gtaattgcca gctggttgca tacccgtgaa cccgcgaaga aagaaagcac
     7861 cacggtgaag cgtaagcgca gaactaagaa gcagaagaaa gagccggaag cgaagcaggg
     7921 cgattacctg gtgggtacgg atgaaaacgt gctggtactt aatcgcacct atgccaaccg
     7981 gggcaacgct gaacgggcag cgaaaatgca gtgggaacgt ctgcaacgcg gcgttgcgtc
     8041 attctcgcta caactggcgg aagggcgggc agatctctac acggaaatgc ctgtgaaggt
     8101 cagtggtttt aaacagccga tagatgatgc ggaatggacc attacgactc tgacacatac
     8161 cgtcagcccg gataacggtt ttacgaccag tctggagctt gaagtgagga ttgatgattt
     8221 cgaaatggaa tgattcttcg caatggagaa cttttaagtt tgcaaaatgg aataatgcgg
     8281 tatcattatt gtgaatttag caaaaatggg gagaactcga aaaatgatga tttgcccact
     8341 gtgtggaagt gccgcccata ctcgcagcag ttttcaggta tcttcattga ccaaagagcg
     8401 ttacaaccag tgccagaata ttaactgcag ccatactttt gtaacccatg aaacttttgt
     8461 tcgttcgatt gcaacgccaa aagagtcaaa tccggttcag ccgcatccaa tgaaatcagg
     8521 acaggtggcg ctctctcttt gacgctgccg ccattttgtc gccatcgtta aaaaacagtg
     8581 cttctaacgt catgatttta aacggcataa atttcaggca acaaaaaacc catcaacctt
     8641 gaaccgaaat ggcggggttg atgggctcca caaaatgggg acatcaaaga aaagcagtgg
     8701 cactaattaa gactgatgcc ctgcggaaaa gttctgcggt tgtgcaaaaa aatttcattt
     8761 tcagggcaac ttcagtttta tcctaatcct ggccatacca tgacgatgat tgtccctgcc
     8821 agcgtcagca ggacgttggc gattgcgtag gtgcccgcat agcccagcgc agggatgtta
     8881 ctgcgagctg tatcactgat gatctccatt gccggcgcgc aggtgcgtgc gcccatcatt
     8941 gcgccgaaca acagtgcgcg gttcattcgc aatacataag caccgaacaa gaaacagata
     9001 accacgggca caagactgac aattaatccg gcaatcaaca tctgaccgcc aatcgcgccc
     9061 aggccgttat taataccgct accggcgctc agaccaacgc ctgccataaa caccatcaag
     9121 ccgaactctt tcaccatgct taatgcacct tgcggaatgt aaccgaaggt cgggtggtta
     9181 gcacgcataa agcccagcat aattccggcg aataacaacc cggcagcgtt ccccatgccg
     9241 aaactgaatg tgctgaactg gaaggtgatc atcccgatca tcagcccaat aacaaagaag
     9301 gcgcaaaatg ccagcaggtc agtgacctgg ctgtgaatcg agataaagcc gatgcgatcg
     9361 gcgatggttt ttacgcgacg ggcatcaccg ctgacttgta aaacgtcacc tttgttaagc
     9421 acgacgttgt catctatcgg catctcaatc tggctacgaa tgacgcggtt aaggaagcaa
     9481 ccgtgatcgg tcaacttcag ttgtgcgaga cgtttaccta cagcgttatg gtttttaacg
     9541 accacttctt cagtgacgat acgcatgtcg agaaggtcac gatcgaaaac ttctttaccg
     9601 ttacggaagc tgggatcgag tcgggcatgg gcgtcgggat agcctaccaa cgctatttca
     9661 tcgcccattt gtagcacggc atcaccgtct ggatttgcca gaatcccgtt acgtcgaata
     9721 cgttcaatgt agcagccggt ttgtcgataa atacccagtt cacgcagatt tttgccgtcg
     9781 gtccaggcca ccagctccgg gccgacgcga taggcgcgga tcaccggtaa ataaacctta
     9841 cggttggcat cagtgtccag gccacgttcg cgggcgattt gctgggcgct ggtctgtaag
     9901 tcctgatgct gcaatttcgg caagtaacgc gcaccaacaa tcaaactcac cagaccgatt
     9961 aaataggtta aggcatatcc gaggctcaga ttatccagtg ccagtgagag ctgcctgctt
    10021 tccataccgg aatgacgcag tgtatcgcca gcaccgacca gaaccggtgt cgacgtcata
    10081 gagcctgcta acataccggc cgtcaggcca atatcccagc caaacagctt acctaaccct
    10141 aaggcgatca ccagcgcact gccaaccatc accagtgcta acattaggta atttttccca
    10201 tcgcgaaaaa aaatggaaaa aaagttcggt ccggcttcga ccccgacgca gaaaataaac
    10261 agcataaagc caagattaag cgcatcggtg ttaatgctga aatgttgttg gcctaataac
    10321 agcgatacga ctaaaacgcc aatggaatta cccagttgga tcgaaccaag tcgtaacttt
    10381 ccgagacata gcccaagcgc gaggaccaca aataataaca gaatgtaatt cccatttaac
    10441 aattcggcga cgtttatatt cacggaggct aacttcttgt ttactagtaa gctgttgaaa
    10501 gaaatggtaa tttacgataa tgttttttac cagaattcag ggcgcagatt cattcagcgc
    10561 acctaaacga tagtaaagta acaatatatt ttactagtgt aatcacatta ggtatcaacg
    10621 gctatatgaa ttgcgttggc ctatattagc atggaatgcg aagcggcttt atcttactga
    10681 acgccacact ggcgaaaaat gtgttcgata gacgcagtgt caggaggaac gagtgaaaca
    10741 taaacaacgt tgggcggggg caatctgctg ttttgtcctc ttcattgtgg tgtgcctttt
    10801 tctggcgacg cacatgaaag gcgcttttcg ggctgccggg catcctgaaa tcggcttgct
    10861 gtttttcatt cttcctggag cagttgccag tttcttttca cagcgtagag aagtcctgaa
    10921 acctctattt ggcgcaatgc tggcggcacc ctgttcaatg cttattatgc ggctgttttt
    10981 ttcaccgacc cgctcattct ggcaagagct ggcatggtta ctaagcgcgg tgttctggtg
    11041 tgcgctgggg gcactgtgtt tcttatttat cagtagtttg tttaaaccac agcacagaaa
    11101 aaatcagtaa agccctcaac gcgagggctt gtcagacgat caggcgtcca gattttcttt
    11161 cacccatgca gcaaaatcgg tatagccgcc gatatgttgc tgatcgacaa aaatctgcgg
    11221 cacggtttct acgggtttac ctgccttttg ttgtagatct tctttagtga tcccttccgc
    11281 acgaatatct acatactgat actgaaaatc atcgcgttca ttgctcaatt tctcagccag
    11341 atcttttgca cgcacacagt aagggcaacc cggacgacca aaaataacgg tttgcattat
    11401 ttctctcctc atagatttat gcctgtaatg atcacgctaa aatgtattcg ctgaaagtag
    11461 gtttaacctg ttgcattaat tgctaaaagc tataactgtt aaacacaata cagtgaaaag
    11521 ttttagactg aaggctcact ttgcagaggg aagcgtatgc gcgcgatcgg taaattgcct
    11581 aaaagcgtgt tgatactgga atttatcgga atgatgttgc tggcggtggc gctgctgtcg
    11641 gtaagcgact ccctgtcgct gcctgagcca ttttctcggc cagaagtgca gattctgatg
    11701 atttttctcg gtgttttgct catgcttccc gctgcggtgg tggttattct tcaggtggca
    11761 aaacgtcttg ccccacagct gatgaaccgt ccaccgcaat attcacgttc agaaagagaa
    11821 aaagataatg acgccaacca ttgaacttat ttgtggccat cgctccattc gccatttcac
    11881 tgatgaaccc atttccgaag cgcagcgtga ggcgattatt aacagcgccc gtgcgacgtc
    11941 cagttccagt tttttgcagt gcagtagcat tattcgcatt accgacaaag cgttacgtga
    12001 agaactggtg acgctgaccg gcgggcaaaa acacgtagcg caagcggcgg agttctgggt
    12061 gttctgtgcc gactttaacc gccatttaca gatctgtccg gatgctcagc tcggcctggc
    12121 ggaacaactg ttgctcggtg tcgttgatac ggcaatgatg gcgcagaatg cattaatcgc
    12181 agcggaatcg ctgggattgg gcggggtata tatcggcggc ctgcgcaata atattgaagc
    12241 ggtgacgaaa ctgcttaaat taccgcagca tgttctgccg ctgtttgggc tgtgccttgg
    12301 ctggccagcg gataatccgg atcttaagcc gcgtttaccg gcctccattt tggtgcatga
    12361 aaacagctat caaccgctgg ataaaggcgc actggcgcag tatgacgagc aactggcgga
    12421 atattacctc acccgtggca gcaataatcg ccgggatacc tggagcgatc atatccgccg
    12481 aacaatcatt aaagaaagcc gcccatttat tctggattat ttgcacaaac agggttgggc
    12541 gacgcgctaa aaccgccacg tcgatgtatg atacgcgggc ttttgaccag gtctgacaga
    12601 gaggtgcagg gtgaaaattg ccatattgtc ccgggatgga acgctctatt cgtgtaagcg
    12661 gctgcgtgaa gccgctatac agcgcggtca cctggttgaa attcttgatc cgctttcttg
    12721 ctacatgaac ataaatcctg cggcgtcttc tattcactac aaaggccgca agttacccca
    12781 ttttgacgca gtgatcccgc gtattggcac cgccattacc ttttatggga cggcggcact
    12841 gcgccagttc gagatgctgg ggagctatcc gctcaatgag tcggtcgcca ttgcccgggc
    12901 gcgtgacaaa ttgcgttcca tgcaactgct ggcgcgtcag ggcatcgacc tgcctgtcac
    12961 gggcattgcg cattcgccgg atgataccag cgatttaatc gacatggtcg gtggtgcgcc
    13021 gctggtggtc aagctggttg aaggcacgca gggaattggc gtcgtgttgg cggagacgcg
    13081 tcaggcggcg gaaagcgtga ttgacgcttt ccgcggtctg aacgcgcata ttctggtgca
    13141 ggaatatatc aaagaggcgc aagggtgcga tatccgctgt ctggttgttg gtgatgaagt
    13201 ggtcgctgcg attgaacggc gagcgaaaga gggcgatttt cgttccaatt tgcatcgtgg
    13261 cggcgcggca agcgtcgcca gtatcacacc acaggagcgt gaaatcgcga taaaagccgc
    13321 gcgaacgatg gcgctggacg ttgctggtgt ggatattctg cgtgctaatc gcgggccgtt
    13381 ggtgatggaa gtgaatgcgt cgccagggct ggaaggaata gaaaaaacaa ccggtatcga
    13441 catcgcgggt aaaatgatcc gctggatcga acgccacgct acgacggaat attgcctgaa
    13501 aacgggtggt tagtcgcaat cacattactg atcatggttt tgcctgcgct ttttgcgtaa
    13561 gctgtgccgg tctttttatc ggaagaggtt gtacaaaatt atgacatcgc tggtcgttcc
    13621 tggtctggat acgttgcgtc aatggctcga tgacctgggg atgagttttt ttgaatgtga
    13681 taactgtcag gctctgcatc tgccccatat gcagaatttc gacggtgtct ttgatgccaa
    13741 aatcgatctg atcgataaca cgatcctgtt ttctgccatg gcggaagtcc gaccttcagc
    13801 cgtattgccg ctggcggcgg atttatctgc catcaatgct agttcgctga ccgtgaaagc
    13861 atttcttgat atgcaggatg ataatctgcc aaagctggtg gtttgccagt ctttatccgt
    13921 tatgcagggc gtaacctatg agcagtttgc atggttcgtg cgtcagagcg aagagcagat
    13981 ttcgatggtc attcttgaag ctaatgccca tcaactgctg ttaccgactg acgatgaagg
    14041 gcaaaacaac gttaccgaaa actatttcct ccactgataa ctcctttcga gcacgcagtc
    14101 gctggtgcag tggctgcgcg ctgcaaaatt atctgctgtt tttaaccttt tcttaaagat
    14161 tgtttcactt atcttgtgtc gatttggctt tatcacatag agcaaatacg cataaaaatt
    14221 tgttaaatac cgttttttaa tccgagctat agtctcaaac cctggctaaa gttattcttg
    14281 cgatgctttt atatagcgag cagtgctggc cgggagagag ttctcttttc ttacaccgcg
    14341 ccgataaaaa atatgcacgt ttattgcata tctttcagtg tgacaacttt tgttcgtttg
    14401 ttaacgaact ttcagaagga aagagatatg accgccttaa ataaaaaatg gctatcgggt
    14461 ctggttgcgg gtgctctgat ggccgtctct gtcagcacgc tcgcggctga acaaaaaaca
    14521 ctccacattt ataactggtc tgattatatc gccccggaca cggtggccaa ttttgaaaaa
    14581 gaaaccggta ttaaagtcgt ctacgatgtt ttcgactcta acgaagtact ggaaggcaaa
    14641 ttaatggcgg ggagcaccgg ctttgacctg gtggtgccgt cagcaagctt tcttgaacgc
    14701 cagctgacag cgggagtttt ccagccgctg gacaaaagca aattgccgga gtggaagaat
    14761 ctcgacccgg aactgctgaa gttggtcgcc aaacacgatc ccgacaataa atttgctatg
    14821 ccctatatgt gggcgacgac cgggattggc tataacgtcg ataaagtcaa agcggtgctg
    14881 ggcgaaaacg cgcccgtcga tagctgggac ttgatcctca agcctgaaaa tctggaaaaa
    14941 ctgaaaagct gcggtgtctc tttcctcgat gcgccagaag aagtttttgc taccgtgctg
    15001 aattatctcg gcaaagatcc caacagcact aaagcggatg attacaccgg accggctacc
    15061 gatctgctgt taaagctgcg cccgaacatt cgttatttcc attcatctca atacattaac
    15121 gacctggcaa acggcgatat ctgcgtcgct attggctggg cgggcgatgt ctggcaggcg
    15181 tcaaaccgcg cgaaggaagc gaagaatggc gtgaatgtct cgttctcgat tccaaaagaa
    15241 ggggcgatgg cgttctttga tgtattcgcc atgcctgccg atgccaaaaa caaagacgaa
    15301 gcctatcagt tcctgaatta cctgctgcgc ccggatgtag tagcgcatat ttccgaccat
    15361 gtgttctatg ccaacgccaa taaagcagcc acgccgctgg tgagtgcgga agtccgtgag
    15421 aacccgggta tttatccgcc tgcggatgtt cgtgcgaagc tgttcactct gaaagtgcag
    15481 gacccgaaaa tcgaccgtgt gcgcacccgc gcgtggacca aagtgaagag cggaaaataa
    15541 tccgcagcct tagatgccgg gcgggcgcac cacacccgcc ggcaattcgc accatcatgg
    15601 tgcgcttgca cacattcaat gccggagagc agccgtgaat gacgctatcc ctcgcccgca
    15661 ggcgaaaacc cgtaaggcgc tgacgccgct attagaaatc cgcaacctca ccaaatccta
    15721 cgatggtcaa catgcggtgg atgatgtcag cctgactatc tacaaaggtg aaatcttcgc
    15781 gctgctgggc gcttccggct gtggtaaatc cacgctgctg cgtatgctgg caggttttga
    15841 acaaccctct gccggacaga ttatgcttga tggcgtcgat ttgtcacagg tgccacctta
    15901 tctacgcccc atcaatatga tgtttcagtc ttacgcattg tttccccata tgactgtgga
    15961 gcagaacatc gcctttggcc tgaaacagga caaactaccg aaagcggaaa ttgccacccg
    16021 ggtcaacgag atgcttgggc tggtgcatat gcaggagttc gccaaacgca aaccacatca
    16081 gctttccggc ggtcagagac agcgtgtggc gctggcccga agccttgcca agcgcccgaa
    16141 actattactg ctcgacgagc cgatgggcgc gctggataaa aagctgcgtg accggatgca
    16201 gcttgaagtg gtggatattc tggagcgtgt cggcgtgacc tgtgtgatgg tcactcacga
    16261 tcaggaagag gcgatgacga tggcgggacg tatcgccatt atgaatcgcg ggaaatttgt
    16321 ccagattggc gagccagaag agatctacga acatccaacc acccgctaca gtgctgaatt
    16381 tatcggttcg gttaatgtct ttgaaggtgt actcaaagag cgtcatgagg atgggcttgt
    16441 gctttattcg cctgggctgg tgcatccact gaaagtcgac gcggatgcct cggtggtcga
    16501 taacgtgccg gtacatgtgg cgctgcgccc ggaaaaaatc atgctttgcg aagagccgcc
    16561 cgccaatggt tgtaacttcg cggtggggga ggtgatacac attgcctatc tcggcgatct
    16621 ttcggtgtat cacgttcgtc tgaaaagtgg gcagatgatt agcgcccagc tacaaaacgc
    16681 ccatcgtcat cgtaaagggt taccgacctg gggcgacgaa gtgcgtttgt gctgggaagt
    16741 ggacagctgt gtggtgctga cggtttaagg agcaaagatg agtacacttg aacctgctgc
    16801 ccagtcgaaa ccaccgggcg gatttaagct gtggttgtcg cagctgcaaa tgaagcatgg
    16861 gcgcaaactg gtcattgcgt tgccgtatat ctggttgatc ttgctgtttc tgctgccatt
    16921 tctgattgtc tttaaaataa gcctggcaga gatggcgcgc gctattccac cttataccga
    16981 actgatggag tgggctgacg ggcaactttc catcactctt aatctcggta attttctgca
    17041 actgaccgac gatccgctct attttgatgc ttatctccag tcgttacagg tagcggtgat
    17101 ttcgactatt tgctgtttac tgatcggcta tccgctggcg tgggcggtgg cgcacagtaa
    17161 gccctcgacc cgtaatatct tattactact ggtgatcctg ccgtcgtgga cctcgtttct
    17221 gatccgcgtt tatgcctgga tgggaatatt aaaaaacaac ggtgtgctga ataattttct
    17281 gctgtggctg ggggttatcg atcaaccgct gaccattctg cataccaatc tggccgttta
    17341 tatcggcatt gtttacgctt acgtgccgtt tatggtactg ccgatttata ccgcgttgat
    17401 tcgtattgat tattcgctgg tggaagcagc gctggatctc ggtgcacgac cgctgaaaac
    17461 gttctttact gtgatcgtgc cgctgactaa aggtgggatt attgccggat cgatgctggt
    17521 gtttatcccg gctgtgggcg agtttgtgat cccggaactg ctcggtggcc cggacagcat
    17581 catgatcggg cgcgtgctat ggcaagagtt tttcaataac cgcgactggc cggtggcctc
    17641 ggcggtagcg atcatcatgt tgctgctgct aattgtgccg ataatgtggt tccacaaaca
    17701 ccagcaaaaa agcgtgggag aacacggatg aataatttac cggtagttcg ttcgccctgg
    17761 cggattgtga ttttgctgct gggctttacc tttctctacg cgccaatgct gatgctggtt
    17821 atctattcgt ttaacagctc gaagctggtg acggtgtggg ccggctggtc aacgcgctgg
    17881 tatggtgagt tattgcgcga tgacgcgatg atgagtgcgg ttggtttaag cctgacaatt
    17941 gctgcctgtg cggcaacggc ggcggcgatc ctcgggacta ttgcggcggt ggtgctggtg
    18001 cgctttggca ggtttcgcgg atcaaatggc tttgccttta tgatcaccgc gccgctggtg
    18061 atgccagatg tcatcacggg cttgtcgctg ttgttattat tcgtcgcgct tgctcatgcc
    18121 attggctggc ctgcggaccg cggtatgctc accatctggc tggcgcatgt cactttttgt
    18181 acggcttatg tggcggtcgt tatttcttca agattgcggg aactggatcg ctcgatagaa
    18241 gaagcagcga tggatctcgg tgcgacgccg ctgaaagtgt ttttcgtcat tacgctaccg
    18301 atgatcatgc ccgcgatcat ttctggctgg ttactggctt ttactttgtc gcttgatgat
    18361 ctggtgatcg ccagctttgt ttccgggccg ggagccacca cgttaccgat gctggtcttt
    18421 tccagcgtgc ggatgggggt gaatccggaa atcaacgccc ttgcaacgtt aattctcggt
    18481 gcggtcggaa ttgtcggatt tatcgcctgg tatctgatgg ctcgcgcaga aaaacagcgg
    18541 atacgcgata tccagcgtgc aagacatggc tgaagacact aaaatttgcc aacctggcta
    18601 cataatgccg cgcatgccgc ggcattgttt tcatggaaga cgaaacgttg ggatttttta
    18661 agaaaacatc ttcatctcat gctcgcctga atgtgcctgc gctggtgcag gtggcggcgc
    18721 tcgccattat tatgatccgt ggcctcgacg tgctgatgat tttcaatacg ctgggcgtgc
    18781 gcggtattgg cgagttcatt catcgcagcg tacaaacctg gagtttaacg ctggtctttt
    18841 taagcagtct ggtgctggtt ttcattgaga tctggtgtgc gttttcactg gtgaaagggc
    18901 gtcgctgggc gcgctggcta tatctgctga cacaaatcac cgccgcaagt tacttgtggg
    18961 cggcttcgct ggggtacggt tatccggagc tgttcagcat tcccggtgaa tcaaaacgtg
    19021 aaatcttcca tagcctgatg ctgcagaagc tgccggatat gctcatcctg atgctgctgt
    19081 tcgttccctc gaccagtcgg cggttcttcc agttgcaata atgtgtataa tcgtcgcccc
    19141 tgatgatgtg aaggtcaatg tatgcagtgc gcactttacg acgcgggtcg ctgtcgttcc
    19201 tgtcagtgga taacgcagcc gattccagag caactctccg ctaaaaccgc cgatcttaaa
    19261 aatctgctcg ccgattttcc ggttgaggaa tggtgcgcgc cggtgtcagg cccggaacaa
    19321 gggtttcgta ataaagccaa aatggtggtg agtggtagcg ttgaaaaacc actgctcggt
    19381 atgctgcatc gcgacggcac accagaagac ctttgtgact gcccgcttta tcctgcctca
    19441 tttgcgcccg tttttgcggc gctaaaaccg tttatcgccc gtgcggggct gacaccctac
    19501 aacgtggcgc gtaagcgtgg cgaactgaaa tacattctgc tgactgaaag ccagagcgat
    19561 ggcggcatga tgctgcgctt tgtactgcgt tctgaaacca aactggcaca actgcgtaag
    19621 gcgctgccgt ggttacagga acaactaccg caactgaaag ttattaccgt caatattcag
    19681 ccggtacata tggcgattat ggaaggggag acggagatct accttactga acaacaggcg
    19741 ctggcagagc gttttaatga cgtaccgctg tggatccgtc cgcaaagttt cttccagact
    19801 aatccggcgg tcgccagcca gctgtacgct accgcgcgcg actgggtacg gcagctgcca
    19861 gttaaacata tgtgggatct gttctgcggt gtgggtggct ttggtttaca ctgcgcgacg
    19921 cctgacatgc agttaaccgg gatcgaaatt gcatcagagg ccattgcctg tgcaaagcag
    19981 tcagccgctg aactgggctt aacgcgtttg caatttcagg cgctggactc cactcagttt
    20041 gccaccgctc agggggaggt gccggagctg gtgctggtta atccgccgcg ccgcggcatt
    20101 ggtaaaccgc tatgtgatta tctctcaaca atggcaccgc gttttattat ctactccagc
    20161 tgtaacgccc aaaccatggc gaaagatatc cgcgaactgc caggttaccg catcgaacgg
    20221 gtacagcttt ttgatatgtt cccgcacacc gcgcactatg aagtgctgac gctgctggtg
    20281 aagcaataaa aaagccgcag gtgcggcttc agattgctga tcaggtgcgc tttgttcatg
    20341 ccggatgcgg cgtgtacgcc ttatccggcc tacaaaatca tgctaaatca atacattgca
    20401 gagttgatgt gggccggata agcgcagcgc atcaggcaat cttacttttg tcatcagtct
    20461 caattactgc ggaaaccact ggtcattgat tttctgatat gtaccgtcag ctttaattgc
    20521 tgccagcgcg ttattcagtt tttccagcag agctttgtta tccggacgta cagcgatgcc
    20581 cagaccggtg ccgaagtatt gcggatcggt cactttttca gtagcaacgc ccagttgcgg
    20641 attggttttc agccattcgt ttaccaccgc tgtgtcacca aataccccat caatacgacc
    20701 atttttcaga tcgataaagg cattctgata actgtcatag gagacagttt tcacttcggg
    20761 gtgctgatcc tgaatatatt tctggtgcgt ggtgccgttt tccatcccaa tacgtttgcc
    20821 tttcagatcg gcaaacgttt tgtaggtatc ttttttggca atcacgacgg ctgagttttc
    20881 atagtagggc gtggtaaacg atacctgctt gctacgctcg ggcgtgatat ccataccgga
    20941 gattacggcg tcatattttc tgaatttcag tgacgggatc aggctgtcga acgcgtgatt
    21001 agtaaaagta cattctgcct gcatttgttt gcacaaggct tttgccagat cgatatcaaa
    21061 gccgacaatc tcattattag cacctataga ttcaaagggt ggataggtgg ctgaaacgcc
    21121 aaaattgatt ttctctgcgg cagaagcacc gaaagtaaag gaagcaagta aagcggcaag
    21181 aactaacttt ttcatgatgg aactcccgtc tgtcaatctt atgatttttg gccgtgtctg
    21241 cggcatggga taacaatgcc atcaagtgaa tttatatgca ataaatatga ttaaataatt
    21301 taaatgaaat aaaaaaagac ggatacctta gtgagttgtc cgtcttcatt ataagaattt
    21361 atgcactatg taggccggat aaggcgtcca cgccgcatcc ggcacaggca ccgtgctgat
    21421 gtctgatgcg acgctggcgc gtcttatcag acctacaaac ccccccggcg aatgtacgca
    21481 gctacattaa tttcgccgtt cgaatgccag tgctttgcgc tcgatcagac gcatcatcag
    21541 cgtcagcagg ccgttgacga ccaggtaaat aatccctgcc gcaccgaaca ccattacatc
    21601 gtaggtgcgt ccgtacaaca actggctgta tcccatcact tccatcagcg taatggtgta
    21661 agccagagag gtacttttga acaccagcac cacttcgttg gaataagaag agagcgagcg
    21721 tttaaaggca tacggcagca ggatcgccag cgtatctttt ttgctcattc ccagggcgct
    21781 acaggactgc cactgacctt ctgggatcgc acgaattgca ccgtaaaaca gctgcgtggt
    21841 atacgccgca ctgttcagcg ataacgcaat cagcgcacat aaccacggtt ctgacaacaa
    21901 atgccacagt gccggatact cctgcaaagt cggaaactgg cccggcccgt aataaatcag
    21961 gaagatctgc accagcagcg gcgtaccggt aaacagcgtg atataacccc gcaccagcca
    22021 caccagcacc ggcgttttca gcgtcaggat gatggtaaaa atcaatgcca gaatcagtgc
    22081 cacaatcagc gaggcaacgg ttagcgtcag gctggtgtgt agccctttca tcagttcggg
    22141 taaatactca aacattagct gggcctccgc tcaaaacgtg tcgcgcgcag gtcaatgcgt
    22201 ttgagaatgt actgactgag cagggtgatc accaggtaaa tcgccgccgc cacaatgtac
    22261 caggtaaatg gttcctgggt acgagtagcg atgctttttg tttgcagcat taaatcattc
    22321 acactaatca aactgaccag cgcggtatct ttcagcagca ccagccactg gttaccgagg
    22381 ccaggcagcg catgacgcca catctgcggc atcaccagac ggaaaaagat agccgatttc
    22441 gacagcccca gcgcctgacc agactcccac tgacccaccg gcaccgcttt caacgcgccc
    22501 cgaagcgttt gcgaggcata ggcggcatac agcagtgaca gagcgatgac accacaaagg
    22561 aacgggctaa cgtcgaagtt ctcaatgtcc atctgcactg ggatctgcac gaacccaaga
    22621 ttgatagtga agccatccga aagcgtcagc agcagctgcg aggagccaaa atagataaac
    22681 agcaccacca gaatttctgg caggccacgc agaatggtta ccagcgctga acctgcccac
    22741 gcgacaggac gccattttgc cgactcccat accgcaaaga acatcgccag cgccagcccg
    22801 acaatcaatg cacaaacggc aaggccgacg gtcatcccgg cggcgcttgc taaaggaaaa
    22861 aattcattca tcaggaatta cttctggaac catttgttgt agatggtttc gtaagtgcca
    22921 tctttcttca ctttttccag cgcagtgttg agtttctgct gcagctcagt gttgccctga
    22981 cgtaccgcga tgccgaggcc agtgccgaag taatctttat cggtcacttt gtcgcccacc
    23041 gccgccagtt tcgggttatc tttcagccac tcagtgacca ctgcggtgtc accgaagacg
    23101 ccgtcgatac gcccgttttg cagatccagt tttgcgttct ggtagctgtc atacggaacg
    23161 gtagtgattt ccgggtgctt atccataatg aatttctggt gtgtcgtccc gttctgaacg
    23221 ccgacttttt tgcctttcag ctgatcaaca ctggtgtatt tgccttgctg acccacaaac
    23281 agggcagagt tgtcatagta cggggtggta aacagtacct gcttttcacg ctccggagtg
    23341 atatccatgc ccgccatcac tgcttctacg cgacggaatt tcaggcttgg gatcaggctg
    23401 tcaaacgcct ggttagagaa agtacaggtt gcatcaatct ctttacacag tgcctgtgcc
    23461 aggtcgacgt caaaaccaac gatctggttg tttgcatcaa tcgattcaaa cggaggatag
    23521 gaggcttcgg tagcaaaacg aatggtttcg gcagctgtgg cggaaagact aaaacctgca
    23581 attaacgcgg caatcagaac ttttttcatt gttgttatcc cgaatcttag tgagagagat
    23641 agtttttaaa tgcttcggtt tgcggctcgg taaagcagct cgcgtcgcct tgttctacga
    23701 tatgaccatt ttccatatac accactcggc tggcggtttt acgcgccact tcaacttcgt
    23761 gggtgacgat cacctgggta atattcgttt ctgccagctc acgaatgatg ctgacgattt
    23821 gtgccgtaat ttccgggtcc agtgcggcgg tcggttcatc gaacagcagt acctgcggtt
    23881 ccatcatcaa cgcacgggca atagcaacac gctgctgctg accaccagaa agatgcagcg
    23941 ggtaacgatc gctataaggt ttgagacgca gacgttccag cagtttttct gcacgggcca
    24001 gcgcctgatc tttactcaac cccagtacac ggcagggcgc ttcaatcagg ttttgctgca
    24061 cggtcagatg cggccacagg ttgtattgct gaaacaccat gccaacgtta cgacgcaaat
    24121 cgcgaatcgc tttgtcagag ggtgttttgg tgaaatcgaa atggttgcct gcaatgttga
    24181 gcgtaccgga gcgcggcatc tcaagcagat tgagtacacg cagcagcgag cttttacccg
    24241 cgccgctggg gccaagtaac accagcgttt cgccctgtgg gcaatccagc gtgatatcga
    24301 acagcgcctg atgcgcgccg tagaagcaat taatgccgtt taattgaata ctcattgaca
    24361 ctcgtatact ggcagtctga tagctattga ggtcgaagat agtacctttg acagaataat
    24421 tatgcaatat ttatgcttta aaagttaaaa gcaaagcgca ttattcaata aacatagcac
    24481 aaaataacgg gggcggtggt cggtgagcat aaatgtcggc attcctcacg aaatgccgga
    24541 caatttacgg ggtttattgg ttgatcaagg cgttagcgat tctcgatgga ctgacggagc
    24601 gtacccgccg tggcatgaac gctgccgcct aaatagcgta catcgtcgat cacccaacac
    24661 tggccttcct gaatcattaa cacttcatcc tgccagctct gatcaccctg ttttagatcc
    24721 acacgcagag gaatatttcg cgcatcacga ttcgggattg ttgaggcact ggcaacacgg
    24781 gcgctctctg gcaaggttgt gcgactggag aatggatcgt tggtcagtag ttcccgatgg
    24841 ttattatccc gggaggcatc gctaagcagt gtcgccagtt tgtcgctcag ataagggcgc
    24901 aaggcggtga tgtcgttgct gcggtgcaaa atgcggtagt cataaaattg ctgggccacg
    24961 ttatccgggc ctccttcaac gcaaggacca ctgcgtgtgc cgttatcttt ataagctgga
    25021 gtgactgtgg tgcaggcact gaggagcagt gcgcagggga taagcattgt caatttgctg
    25081 tagcgcataa tgatttcctt ataagcgatc gctctgaaag cgttctacga taataatgat
    25141 atcctttcaa taatagcgta tcagtctgat aatgctttag agatcgaagg cttaacaaac
    25201 aaggagatcg atcatgcaat tttctacaac cccaactctg gaaggccaga ccatcgttga
    25261 atattgcggt gtggtgaccg gcgaagcgat tttaggtgcc aatattttcc gtgatttctt
    25321 tgccggtatc cgcgatatcg ttggcggacg ttccggtgcg tatgaaaaag aactgcgtaa
    25381 agcacgggag atcgcctttg aggaattagg ctcccaggcg cgggcgctgg gggccgatgc
    25441 cgtcgtcggt attgatatcg actacgaaac ggtcgggcaa aacggcagta tgctgatggt
    25501 tagcgtcagc ggtacggcgg tgaaaacgcg tcgatgagaa gagtcttctg gctgatcgct
    25561 gccgctctgt tactggcagg gtgtgcaggc gaaaaaggca ttgtcgagaa agagggatat
    25621 cagcttgata cccgacgcca ggcgcaggcg gcgtatccgc gcattaaagt gctggtgatc
    25681 cactacaccg cagatgattt tgatagctcg ctggcgacac tgaccgataa gcaggtcagc
    25741 tcgcattatc tggtccctgc ggtaccaccg cgatacaacg gtaaaccgcg catctggcaa
    25801 ctggtgccgg aacaagaact ggcctggcat gcggggatta gcgcctggcg cggggcaacg
    25861 cgccttaacg acacctctat tggcattgag ctggaaaacc gtggctggca aaaatcggcc
    25921 ggagtgaaat attttgcccc gtttgaaccg gcacagattc aggcgcttat tccactggcg
    25981 aaagatatta ttgcccgtta tcacatcaag ccggaaaacg tagtggcaca tgcggatatc
    26041 gcaccgcagc gcaaagacga tccggggcca ttatttccct ggcagcaact ggcgcagcag
    26101 gggattggtg cctggccgga tgcgcagcgg gttaactttt accttgccgg gcgcgcgccg
    26161 cacacaccgg tagataccgc gtcattgctg gagcttttgg cgcgctacgg ttatgacgtt
    26221 aaacctgata tgacaccgcg cgagcagcgg cgcgtgatta tggcattcca gatgcatttc
    26281 cgcccgacgt tatataacgg cgaagcggat gcagaaactc aggcgattgc cgaagcattg
    26341 ctggagaaat acgggcagga ttagcgcggc agttttccgt ggtcgcgtag ccaggcggca
    26401 gttttctcga taccttcatc cagggtgatg accggctgat aacctaactc ttcctgcgca
    26461 cgcgtaatat ccagcgtaaa gtcaaaattc aacttggaga cgccgtagtg ggtcagcggc
    26521 ggctcttttg ctgacttgcg gcctaaacgc tccatgctgc gggcgatcat atccagcatc
    26581 gggtagggga cggaacgaat acgacagtca atattcaact cgtcgatcag cttctgcacg
    26641 atgctgcgca gtgtgcgatg ctcgccgttg gtgatgttgt acacacgccc ggaaggtagc
    26701 ttatcgcagg cttcctggct tgccagccac attgcgtgca cggcattttc atagtaggtc
    26761 atatcgacca gcgcactgcc gccatgcggt aacagaatac tgccgtagtg gtgcatcata
    26821 tgcgccagac ggggaataaa gactttatcg tgcggtccga acagactttg tgggcgcaga
    26881 atagtaaagc gcgtttgtgg attcgcctgc gaaagcatat tgatcacttc ttcgctggct
    26941 gctttgctgc gggcaaactc gttggcgaag cggtgagggc gaaaatcttc tttaatatcg
    27001 cgatggtggt gataatcgaa gtacagggag ggggaagaga tatgaataaa gttacgcaca
    27061 ccccaggcga cagcccattc acccaggcgg cgagtggcgc gaacgttagc cagatcgaaa
    27121 gcctgttgtg tcccccaggg tgaggtaaag ctggagcagt gccacagcgt atcaatgccc
    27181 gcgagcatca ctttagcttg tgatgaaacc agctcggtca gatccgccgg aacaaactct
    27241 gcgcccattt tttccagcaa tttgcccatt gcctcgttgc gaccggtcgc tcgcacgctg
    27301 atgcctttct ggcataaaaa ctctaccgcg tttcgaccta agccgctggt ggcgccggta
    27361 accagtacct tcatatcaat ccactgttgt tgagaaaata acgtgcgcat tcttccgtga
    27421 tttcccccat gatgcaatgg gaaacatgaa agaataacgc aggttttgtc gattaatctg
    27481 tgctttgttc tgccagtctg gcgatttgtt ttgccattcc gcgaaaaata aacagatgcg
    27541 cggggatcat caataaccag taaaacagcc ccggcatacc gtgcggatgc cagaaagcgc
    27601 ggacatcgat agtacgatag tcgcctttat cttccaggct aaaacacagt cgtcccagcc
    27661 ccggcgcttt catgccaaat aacaacgtaa gttgtttttc cggttcaacg acaatcactt
    27721 tccagctatc taccgcatcg ccagtctgta aatattcgcg ctccgggcgg cctttcgcca
    27781 gcttatgacc gatcgcgcgg tccatcaacg cccgtgtctg ccacaaaata ttgccaaaga
    27841 aataacgctc tttaccgccg atttggttca ctacctgcca taaagcagca aggctggcgg
    27901 acgttttaac ggtaaacccc gcctgtttgg caaaataacc gtactccggt cgccagcggg
    27961 caaaggcctg agcgtcgtag ccccagtcgc tggagttgac cagtttttcc tcctctttca
    28021 acgtgctacg taccgcgtca tcgaaagcga tcagccgttg tgggatgagt gcacgtagcg
    28081 cggtatcatc cgccagcaga tcgtgtttca gcccctgaat caacgccctg gcggtggtgg
    28141 gcggtacgga agtaatcaca ttgagaaacc acaccgaaat ccagcgggtg gggaggggga
    28201 tggggatcaa ccagcggcgc ttaccgctca ccgccataaa atgttcaaac tgttgctgat
    28261 aactgagcac ctctggtccg gcggcttcga agatacggtg ttcgctggcc ggatgatcta
    28321 acaacgccac cagatagtgc agcaagtttt ccagcgcgat gggcgtggtg cgtgaacgta
    28381 cccagcgtgg cggcgttaac actggcaggt tgtagaccat atcgcgcatg acttcgaacg
    28441 ccgctgaacc tgcgccaacg ataattccgg cccgaagttc ggtcacaggt acattcgctt
    28501 cacgaagaat gtccgccgta gcctgacgag cacgcagatg atccgactgc tcatgtggcg
    28561 gggcctgcaa cgaactgaga aagattaatt gcttaactgg tacttcacgt agcgcatcgc
    28621 ggacgttgag agccacctgg cgctcctgag cgataaaatc gccgccttcg cccatgctgt
    28681 gcaccagaaa atagacggta tcgatatcct gcaacagggc cggaaggtta tccggccagc
    28741 tgagatcgac tttatggcaa ctgacgtttg ccagttgcag ctttgcaagc ctgtcgacat
    28801 gacgtgccgc cgccaggatc tgatgccctt gctggctgag tgtgcgcacc agatgctgac
    28861 caatgtagcc actggcaccg agaactaaaa tgcgttgcgg cacgtctctc tccttaacgc
    28921 gccaggaatg cgcgccagtg ggcggcgact tccgccagtt gttcgcgcga gacgtcaaga
    28981 tgcgtcacca ggcggacaat cggcgaggcg ttaatcagca cgtttctcgc tttcatgtat
    29041 tcgcctaacg cggcagcatt ttcttccccg acgcgaacaa acagcatatt agtgtcctga
    29101 cgcatcacat ccgcgcctgc ttcacgcagt tgctccgcca tccaggcggc gttgtcgtga
    29161 tcttcctgca accgtgcgac gttatttttc agggcataca tcccggcggc agccagaatc
    29221 ccggactgac gcatcccgcc accggccatt ttccgccagc ggatggcacg tttaatgtaa
    29281 tcacgattac cgacgagtaa tgaaccgact ggcgtcccaa gacctttcga caggcaaatg
    29341 gtgaacgaat cacaatattg cgtgatctct ttcagttcgc agccgtaagc caccacggca
    29401 ttaaagatgc gcgcaccgtc aacatgcagc gccagattgc gctcgcgggt aaattcccat
    29461 gcttctttca ggtattcacg cggcagcact ttgccgttgt gggtgttttc cagactgagt
    29521 aatttggtgc gggcgaaatg gatatcgtcg ggtttgattt tcatcgccac tttatccagc
    29581 ggtagcgtgc cgtcggcagc cgcgtcgatg ggttgcggct gaatactgcc cagcaccgct
    29641 gcgccaccgg cttcaaacag atagttatgc gcggcctgac cgacaatata ctcttcgcca
    29701 cgttcgcagt gactgagcag agcgaccagg ttggcctgag tgccggtagg cagaaaaatg
    29761 gcggcttctt taccggaaag ctctgctgca tagtcctgca gagcattaac ggtagggtcg
    29821 tctccgtaaa cgtcgtcccc aaccggggcg gccatcatcg cttcgagcat ggcgcggctc
    29881 ggtcgggtaa cggtatcact gcgtaaatca atcatggcat gtccttatta tgacgggaaa
    29941 tgccaccctt tttaccttag ccagttcgtt ttcgccagtt cgatcacttc atcgccgcgt
    30001 ccgctgataa ttgcgcgcaa catatacagg ctaaaacctt tggcctgttc gagtttgatc
    30061 tgcggtggaa tggctaactc ttctttggcg accaccacat ccaccaacac cggaccgtcg
    30121 atagagaagg cgcgttgcag ggcttcatca acttcagacg ctttttctac acggataccc
    30181 gtaatgccgc acgcttcggc aatgcgggca aagtttgtgt cgtgtagttc ggtgccgtca
    30241 gtcaaatagc caccagcttt catctccatc gccacaaagc ccagcacgct gttgttaaag
    30301 acgacaattt tcactggcag tttcatctgc actactgaga ggaaatcgcc catcaacatg
    30361 ctaaaaccgc catcgccgca catggcgacc acctgacgtt ctggctctgt cgcctgcgca
    30421 cccagcgcct gcggcatggc gttagccatc gaaccgtggt taaacgaacc taacaggcga
    30481 cgcttgccgt tcattttcag ataacgtgcc gcccataccg ttggcgtgcc gacgtcacag
    30541 gtaaagatgg cgtcatcggc ggcaaaatga ctaatttgct gcgccagata ttgcgggtga
    30601 atggctttct cgctcggttt agctaaatcg tccagccctt tgcgggcatc gcggtaatct
    30661 tccagcgctt tatccagaaa cttgcgatcg gttttttctt ccaccagtgg cagcaatgcg
    30721 cgcagggttg atttgatatc gccgaccagc gccatatcta ccttgctatg cgcgccgatg
    30781 ctggctggat tgatatcaat ctgaataatt ttggcatcgg tcgggtagaa cgcacggtag
    30841 gggaactgag taccgagtag cactaacgtg tcggcgttca tcatggtatg gaaacctgac
    30901 gagaagccga ttaacccggt cattccaaca tcatacggat tatcgtattc gacatgttct
    30961 ttaccgcgca gggcatgaac aataggcgct ttaattttcc cggcaaactc aactaactct
    31021 ttatgcgccc ccgcgcagcc gctgccacac atcagggcga tattgctgga ataacgcagc
    31081 agttgcgcca gtttgcgtaa ctcttcttct tccggcgtca cgattggttg tggcgcatga
    31141 taccagtgcg tggttgcccc ttctggcgca ggttttaacg ccacgtcgcc tggtaacacg
    31201 acaaccgaaa cgccacggtt aagcaccgct ttgcgcatgg caatcgccag tacttgtgga
    31261 atctgctccg ggctggaaac cagctcgcaa tagtgactac attcgcggaa tagctcttgt
    31321 gggtgggttt cctggaaata gccgctgcca atttcgctgg agggaatatg agcggcaatc
    31381 gccagtaccg gaacgtgatt gcggtggcaa tcgaacaggc cgttgattaa gtgcaggttg
    31441 ccggggccgc acgatccggc acagaccgcc agttctccgc taagttgtgc ttcagcgcca
    31501 gcggcaaagg ccgccacttc ttcgtggcgg gtggacatcc actcgatggt gcccatgcga
    31561 ttaagactgt cactaagacc gttcagagag tcgcctgtga ctccccagat gcgtttcacc
    31621 cctgccgatt cgagtgtttt ggcgatataa gctgcaaccg tttgtttcat ggttctccat
    31681 ctcctgaatg tgataacggt aacaagttta gttcatctga cggaggggga agggatggga
    31741 gagaaaggag gcactaacgg ttaaatagcc cgatgaaagg aatatcatcg ggcataaggc
    31801 gattatgcga gaaccaaatc cccctgcgga tggcaggagc aggccagtac gtaaccttca
    31861 gcgatttcgg cgtcggtcag cgtcattgta ctgctcaccg tatattcacc ggaaaccact
    31921 tttgtcttac agcagccgca aacacccgca cggcaggcag cgacaaccgg aacgttattg
    31981 ctttccagcg cctccagtag cgtggtgcca accggggcgt aaaattctcg tgccggttgc
    32041 agtttggtga atttcagacc gctggtcgcc gcttctgcta ctggggtgaa gaatttctct
    32101 ttaaagaaac gcgtcacgcc gagcgctttc acttcctgct ctacccaatc catatacgga
    32161 gccgggccgc aggtcatcac ggtacgtgaa gctaagtcag gtacacctgc cagcagttcg
    32221 cgagtgagac gaccagcgat aaagccttcg gtaacgttat tttctgccac cagcgttacc
    32281 ggatagttac gccactcatc ggcgaaaata acatcctgcg gcgtacgcac gttgtagatc
    32341 acccgcacat cggcctgtgg acggttcttc gcaagccagc gacgcatcga cataatcggc
    32401 gtgacgccgc agcctgccgc cagcaacagg aatttatctt ctgctttatc gtcgcaggta
    32461 aattccccca tcgcgtccga aagccagaga taatcaccgc gttttacatc gcgcgtcagc
    32521 cactgggagc cgacaccgtc atcaatccgc cgcacggtca gggtgatata ttcactcacg
    32581 cctggcgtgg aggaaatggt gtaagcacgc agcgtttccg ctgagtttcg cacgctgacc
    32641 agtgcatatt gcccggcgcg atatgggtag taatcgtggc aaatcaggga aatcgtccac
    32701 acatccggcg tttcttgcgt aatgtgatga acctgcatcc gccacgggca ttgattcgtt
    32761 ggcatcgtca tcgacaaact ccttacgcgc tcaacagttg cttcatgtct tcttcaacag
    32821 tggtgataga acgcaggcca aatttctcgt tcagcaccgc cagcaggtct ggtgtcagga
    32881 aaccaggtgc agtcgggccg gtgacgatat ttttcacgcc cagagaaagc agcgtcagca
    32941 gaatgacgat cgctttctgt tcaaaccagg agagcaccag cgacagcggc agatcgttga
    33001 caccgcagcc cagtttctct gccagagtga cagccagaat aatcgctgag taagcatcgt
    33061 tacattgacc tgcatctacc agacgcggca gaccttcgat atcgccaaac tcaagtttgt
    33121 taaagcgata tttaccacag gcgagggtca ggatcaggca gtcatccggc acgctggtgg
    33181 cgaaatcggt gaagtagtgg cgctcgccgc gtgcgccgtc acagccacca agcaggaaga
    33241 tatgacgcag tttttcacgg ctcaccagat caatcagcgt atccgctgcg ccaagcagcg
    33301 tctggcggcc aaagcccacg gtgatcaggt gcggaatttc gctgtacggg aagcccgcca
    33361 tttgttgcgc ctgggcgatg accgcagaaa aatcttcgcc atccagatga cgcacacccg
    33421 gccagccaac gatgctgcgg gtccagatac gatcgtcata agcgcctacg gttgggtcga
    33481 tgatgcagtt cgaggtcatc acgatggggc cagggaaacg agcgaactcc acttgctgat
    33541 tctgccagcc gctgccgtag ttaccgacca gatgcttgaa tttacgcagc tccgggtagc
    33601 catgcgcagg cagcatttcg ccgtgggtgt aaacattaac gcccgtgcct tcggtctgtt
    33661 ccagcaggtt gtagagatct ttgagatcgt gaccggaaat caggatgcat ttacccgccg
    33721 tcgctttgac gttgacctgg gttggcgtcg ggtgaccgta tttaccggtt tcgcctgcat
    33781 ccagaatgct catcactttg aagttcatct ggccgatttc cattgaacac tcaagaagcg
    33841 cgttcatatc ggcaggccag gtccccagcc acgccatgat tttatgatac tgggcataaa
    33901 tatcgttgtc gtattgaccg agaacatgcg cgtgttccat ataggccgct gcacctttca
    33961 ggccatacag gcacagcaga cgcaggccga gaatgttttc gccaatcgcc gctttatctt
    34021 tgttaggggt aaattctgct gcctgacgtt gcagctcgcc gagatcgtcg ctcaccagtt
    34081 gcaggtcagc catcgggtta tcgacgcgcg cgttggcatc tacagccagg cattgcgctt
    34141 tcagcgcctc gcgcagggca atcgcttcac gagcgtagcc gacaatacgc ggagaatcga
    34201 agttaacgtt ggtcagggtt gagaaaaagg cacgtggcgc gaagctgtca acatcgtggt
    34261 tgatgatgcc gtattcacgc gcttttaccg cccaggcaga aagcccttgc agcgccgcga
    34321 tgagtaaatc ctgaaggtca gaagtttccg ccgttttacc acacatcccc tgcgcgtatg
    34381 agcagccgtt tcctgccgga gtacggatag tttgttcaca ttgcacacaa aacatgatca
    34441 caccttttaa agttatattt aatatacatg tttaaggtta agacgcttaa cgcggggata
    34501 aaagggattt ttcatgcaac tttaagggag attgatttag cgcaattttg gcggcaggga
    34561 tctaccgcca gagaggtatt acgcagagaa aaaggcgatg aggatcggca ctaacaggct
    34621 aagaataaaa ccgtgaacaa ttgccgccgg gaccatatcc agcccgccag tacgttgaag
    34681 aacgggcagg gtgaaatcca ttgatgtggc accgcataag cccagtgcag tagagcggct
    34741 gcggcgaatc agcccaggga tcaacataat agcaatcagt tcacgggcca gatcattaaa
    34801 aaacgccgcg ctcccgatta ccggaccaaa agattcggtc aataaaatac cggaaagaga
    34861 ataccagccg aaaccggagg ccattgccag cgcggtattg atggggagat caagaataaa
    34921 ggcgttaatt aaaccaccaa ttaatgaact gacaaccacc accacggcga caatcattcc
    34981 ccggcgatta aggacaatct gctttaaggt catgccatta ttgcgcaact gaataccaac
    35041 gaggaaaagt agcaaaatta acgtgtattc actggcttcg gtcgcgtgtt gtaagaaagc
    35101 cagtccactc agaccaatgg caaaaccaat cactactacg ccgcacagtt ttagcgactc
    35161 cagcgccatc gcaatacgcg acgggagttt ttcttgctga tggtggttgc gccacggcag
    35221 gcctcgctcc agccacatca gggcggcaat attacacagt aaaataacgg taatactgac
    35281 ggcagaataa tgcagaatcg ccaacaggtt actggcgagg ttatcgagaa acgccagact
    35341 gatacccata aaaaagagaa taaggtaaac catccagctt aatagctgat taataacttt
    35401 taacgcagct tgttggcgaa gcggaatgag gtaacccaca atcaggggaa ccagaatgat
    35461 taacagccca gaaaacatga aaacccagtc cttgcaaaga tgaagtcgaa atgcgcgatg
    35521 acacactact gaaagcggaa ggacgagtaa agttgcaatt aaaaggaaat gttatgcatc
    35581 agagggggat ttttaatcct atctgagtgt ttagcattgt tgcgctcctt tcatgtgcaa
    35641 tgccatataa a
//
LOCUS       DAPGWB010000029        35050 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.029, whole genome shotgun sequence.
ACCESSION   DAPGWB010000029 DAPGWB010000000
VERSION     DAPGWB010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 35050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35050
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.029"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            118..702
                     /locus_tag="RHX79_001437"
     CDS             118..702
                     /locus_tag="RHX79_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2196631.1"
                     /translation="MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETR
                     VDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFD
                     SVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKS
                     AVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ"
     gene            807..1547
                     /locus_tag="RHX79_001438"
     CDS             807..1547
                     /locus_tag="RHX79_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HDV2196632.1"
                     /translation="MFFNIKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVN
                     VRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTAST
                     SLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL
                     ALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVTG
                     LNGKASSAKVHFYAINDFGGAIEGNASL"
     gene            1582..4182
                     /gene="htrE"
                     /locus_tag="RHX79_001439"
     CDS             1582..4182
                     /gene="htrE"
                     /locus_tag="RHX79_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Yad fimbria usher protein HtrE"
                     /protein_id="HDV2196633.1"
                     /translation="MTIKPTKNYHNHLTRIATFCALLYCKSAFCAELVEYDHTFLMGQ
                     NASNIDLSRYSEGNPAIPGMYDVSVYVNDQPIINQSITFIEIEGKKNAQACITLKNLL
                     QFHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASVRYDVNEQRLDIDVPQAWVMK
                     NYQNYVDPSLWENGINAAMLSYNLNGYHSETPGRRNDSIYAAFNGGMNLGAWRLRASG
                     NYNWMTDSGSNYDFKNRYIQRDIASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRM
                     LPPTLASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVT
                     VEESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNN
                     YLTGYTGIQITDNNYTAGLLGLGLNTSVGAFSFDVTHSNVRIPDDKTYQGQSYRVSWN
                     KLFEETSTSLNIAAYRYSTQNYLGLNDALTLIDEVKHPEQDLEPKSMRNYSRMKNQVT
                     VSINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSASWGSYSVSAQRSWN
                     EDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQMSSDFKGNNQLNVSSSGYSDNA
                     RVSYSVNTGYTMNKASKDLSYVGGYASYESPWGSLAGSVSANSDNSRQVSLSTDGGFV
                     LHSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNSTIDRWGYGVTSALSPYHENRI
                     ALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDGKNIPFAADI
                     YDEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEESKPVSCLAHYQQSSEAEKIAQSI
                     ILNGIRCQIQ"
     gene            4199..4768
                     /locus_tag="RHX79_001440"
     CDS             4199..4768
                     /locus_tag="RHX79_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2196634.1"
                     /translation="MIKITPHKIAILMGILLSPSVFATDINVEFTATVKATTCNITLT
                     GNNVTNDGNNNYTLRIPKMGLDKIANKTTESQADFKLVASGCSSGISWIDTTLTGNAS
                     SSSPKLIIPQSGDSSSTTSNIGMGFKKRTTDDATFLKPNSAEKIRWSTDEMQPDKGLE
                     MTVALRETDAGQGVPGNFRALATFNFIYQ"
     gene            4783..5385
                     /gene="yadL"
                     /locus_tag="RHX79_001441"
     CDS             4783..5385
                     /gene="yadL"
                     /locus_tag="RHX79_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000143198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like protein YadL"
                     /protein_id="HDV2196635.1"
                     /translation="MTFKNLRYGLSSSVVLAASLFSVPSYAATDSIGLTVITTVEIGT
                     CTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRA
                     TCEGTANDGAGFANGSTAADKASAVAVEVWSTETPATGSATQFSCVTPASQEVTISNA
                     ANAVVYYPMSARLVVEKNKTVSNVTAGKFSAPATFTVTYN"
     gene            5412..6008
                     /locus_tag="RHX79_001442"
     CDS             5412..6008
                     /locus_tag="RHX79_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2196636.1"
                     /translation="MHPTQRKLMKRIILFLSLQFPITYPAIAGQDIDLVANVKNSTCK
                     SGISNQGNIDLGVVGVGYFSDNVTPESYQPGGKEFTVTVSDCALQGTGDVLNQLHIDF
                     RALSGVMAAGSRQIFANEVATGAKNVGVVLFSIQDPTNIFNVISSAGNSRSVYPVMTS
                     ALHNSSWKFYARMQKIDPALDVISGQVMSHILVDVYYE"
     gene            6061..7335
                     /locus_tag="RHX79_001443"
     CDS             6061..7335
                     /locus_tag="RHX79_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000848455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like adhesin"
                     /protein_id="HDV2196637.1"
                     /translation="MKKFFRHFLFLILCLSCYTASAGTDDNVGYIVGNSYGVGPSDQK
                     WRETGPNGDATVIFRYATSTNNLVFYKPTQLGPTGVKLQWSQLDTASGGGFLYCNRSD
                     STSGSAMRIENAMVDSGKMYGSHKLFNTSVPGLYYTLLISNMWSAYGTVTNVSSPGIY
                     IGDSAEQYFSWYNPSEDVLYWSCNNANSTRKYWAVGGIYQTLTIEFYTDTNFDPTVTQ
                     QIKLSSSSNYLYSFKAYGAGQGINEHSYFIKIDFDLLNVKLTNPTCFTAMLSGTSVTG
                     STVKMGEYSAEQIRNGATPVPFDISLQNCVRVTNIETKLVSTKVGTENGQLLGNTLTG
                     NDAAKGVGVLIEGLATSKNPLMTLKPNDSNSVYKDYDPRGKDDTTGGVYPDQDTGITY
                     PLHFQATLQQDGTIPIEAGEFKATSTFQVTYP"
     gene            7448..8242
                     /gene="panB"
                     /locus_tag="RHX79_001444"
     CDS             7448..8242
                     /gene="panB"
                     /locus_tag="RHX79_001444"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000805487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDV2196638.1"
                     /translation="MKPTTIASLQKCKQDKKRFATITAYDYSFAKLFADEGLNVMLVG
                     DSLGMTVQGHDSTLPVTVEDIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAAT
                     VMRAGANMVKIEGGEWLVETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG
                     DQLLSDALALEAAGAQLLVLECVPVELAKRITDALAIPVIGIGAGNVTDGQILVMHDA
                     FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH"
     gene            8254..9105
                     /gene="panC"
                     /locus_tag="RHX79_001445"
     CDS             8254..9105
                     /gene="panC"
                     /locus_tag="RHX79_001445"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDV2196639.1"
                     /translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEA
                     KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG
                     TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR
                     KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG
                     ERDLDEIITIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID
                     NKMVELA"
     gene            complement(9179..10081)
                     /gene="rpnC"
                     /locus_tag="RHX79_001446"
     CDS             complement(9179..10081)
                     /gene="rpnC"
                     /locus_tag="RHX79_001446"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnC"
                     /protein_id="HDV2196640.1"
                     /translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL
                     HLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAM
                     HRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITI
                     TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQR
                     GHTEQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEERQEFALRLLSKG
                     MSREDVAEMANLPLAEIDKVINLI"
     gene            10355..10735
                     /gene="panD"
                     /locus_tag="RHX79_001447"
     CDS             10355..10735
                     /gene="panD"
                     /locus_tag="RHX79_001447"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDV2196641.1"
                     /translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI
                     DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR
                     PNVAYFEGDNEMKRTAKAIPVQVA"
     gene            complement(10739..11968)
                     /locus_tag="RHX79_001448"
     CDS             complement(10739..11968)
                     /locus_tag="RHX79_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HDV2196642.1"
                     /translation="MYKQAVILLLMLFTASVSAALPARYMQTIENAAIWAQIGDKMVT
                     VGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSN
                     QNLITWKDTPVYNAPSAGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
                     ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQ
                     LEGYVKNKINLPARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFVVTSRIKRHPQKW
                     NPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRA
                     LAQFNPHVWYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILR
                     TDSLETMSRLVSNQPQG"
     gene            complement(12032..12472)
                     /locus_tag="RHX79_001449"
     CDS             complement(12032..12472)
                     /locus_tag="RHX79_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDV2196643.1"
                     /translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML
                     SRMMCDALHEADSGEGVIFLTDLAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMA
                     CRETMTSSEFRERIVELGGPEVSSLWHQQQKNPPFVLKHNLYEY"
     gene            complement(12577..13347)
                     /locus_tag="RHX79_001450"
     CDS             complement(12577..13347)
                     /locus_tag="RHX79_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2196644.1"
                     /translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN
                     LIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT
                     HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
                     GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF
                     LGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS"
     gene            complement(13344..14270)
                     /locus_tag="RHX79_001451"
     CDS             complement(13344..14270)
                     /locus_tag="RHX79_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV2196645.1"
                     /translation="MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK
                     STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ
                     AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL
                     DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT
                     SMKALLAKLKSETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS
                     EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA"
     gene            14379..15041
                     /gene="can"
                     /locus_tag="RHX79_001452"
     CDS             14379..15041
                     /gene="can"
                     /locus_tag="RHX79_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HDV2196646.1"
                     /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSD
                     SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG
                     GVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH
                     STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN
                     HK"
     gene            complement(15082..15618)
                     /gene="hpt"
                     /locus_tag="RHX79_001453"
     CDS             complement(15082..15618)
                     /gene="hpt"
                     /locus_tag="RHX79_001453"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004204384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HDV2196647.1"
                     /translation="MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRG
                     SFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDII
                     DSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDY
                     AQRYRHLPYIGKVILLDE"
     gene            15824..18214
                     /gene="gcd"
                     /locus_tag="RHX79_001454"
     CDS             15824..18214
                     /gene="gcd"
                     /locus_tag="RHX79_001454"
                     /EC_number="1.1.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein glucose dehydrogenase"
                     /protein_id="HDV2196648.1"
                     /translation="MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYP
                     IAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGI
                     WLILPFVWRRLVIPASGAVAALVVALLISGGILTWAGFNDPQEINGTLSANATPAEAI
                     SPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEV
                     TPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAE
                     TASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYE
                     PTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSD
                     EHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATT
                     GKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELV
                     VPAPEKPVPQGAAKGDYVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQM
                     RYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGN
                     PMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEV
                     VWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSN
                     GEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK"
     gene            complement(18416..19966)
                     /gene="cueO"
                     /locus_tag="RHX79_001455"
     CDS             complement(18416..19966)
                     /gene="cueO"
                     /locus_tag="RHX79_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HDV2196649.1"
                     /translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA
                     RNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW
                     HGLEVPGEVDGGPQGIILPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV
                     VIEDDEILKLMLPKQWGIDDVPVIVQDKKFNADGQIDYQLDVMTAAVGWFGDTLLTNG
                     AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVNELPVL
                     MGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL
                     SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN
                     MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT
                     QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDT
                     GMMLGFTV"
     gene            20132..20479
                     /locus_tag="RHX79_001456"
     CDS             20132..20479
                     /locus_tag="RHX79_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacC family pilotin-like protein"
                     /protein_id="HDV2196650.1"
                     /translation="MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKND
                     CGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKA
                     LARDSLSLLAYVK"
     gene            20585..21451
                     /gene="speE"
                     /locus_tag="RHX79_001457"
     CDS             20585..21451
                     /gene="speE"
                     /locus_tag="RHX79_001457"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HDV2196651.1"
                     /translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG
                     RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE
                     SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT
                     DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF
                     YQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALP
                     QYLQDALASQPS"
     gene            21467..22261
                     /gene="speD"
                     /locus_tag="RHX79_001458"
     CDS             21467..22261
                     /gene="speD"
                     /locus_tag="RHX79_001458"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HDV2196652.1"
                     /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN
                     ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP
                     ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
                     VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML
                     LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV"
     gene            complement(22299..22661)
                     /locus_tag="RHX79_001459"
     CDS             complement(22299..22661)
                     /locus_tag="RHX79_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414661.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HDV2196653.1"
                     /translation="MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQ
                     AAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCG
                     VEDFLQVVAAYRNFVQQK"
     gene            complement(22837..25434)
                     /gene="acnB"
                     /locus_tag="RHX79_001460"
     CDS             complement(22837..25434)
                     /gene="acnB"
                     /locus_tag="RHX79_001460"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019080489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDV2196654.1"
                     /translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEF
                     LLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL
                     IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRP
                     ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVG
                     PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG
                     KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV
                     LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESNRGFSLAQKMVGRA
                     CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK
                     PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF
                     PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE
                     KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNI
                     VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPIL
                     CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP
                     TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG
                     TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA
                     DGVIFQTAV"
     gene            25789..27546
                     /locus_tag="RHX79_001461"
     CDS             25789..27546
                     /locus_tag="RHX79_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HDV2196655.1"
                     /translation="MKMTLPFKPHVLALICSAGLCAASTGLYIKSRTVEAPVEPQSTQ
                     QTAPDITAVTLPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDSLLSQVLMASTY
                     PANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL
                     GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKVITTTKKAVPVTQTVTAPVIPSN
                     TVSTASPIITEPATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEP
                     FIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHHHDGGHRDGNGWQHN
                     GDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSA
                     TQLPAPTRDSQRQAAASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFS
                     RRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQ
                     VFKEKVQQRPLNQQQRDNARQRIQSASPQQRQVFREKVQESRPQRLNDSNHTVRLNNE
                     QRSAVRERLSERGARRQER"
     gene            complement(27617..29041)
                     /gene="lpdA"
                     /locus_tag="RHX79_001462"
     CDS             complement(27617..29041)
                     /gene="lpdA"
                     /locus_tag="RHX79_001462"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDV2196656.1"
                     /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV
                     CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA
                     GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP
                     RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI
                     VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN
                     GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC
                     ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNPKAKKK"
     gene            complement(29366..31258)
                     /gene="aceF"
                     /locus_tag="RHX79_001463"
     CDS             complement(29366..31258)
                     /gene="aceF"
                     /locus_tag="RHX79_001463"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HDV2196657.1"
                     /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM
                     EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA
                     AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI
                     KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDE
                     VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM
                     IFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIR
                     RLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKV
                     DFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAK
                     RKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVV
                     PVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVN
                     APEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSD
                     IRRLVM"
     gene            complement(31273..33936)
                     /gene="aceE"
                     /locus_tag="RHX79_001464"
     CDS             complement(31273..33936)
                     /gene="aceE"
                     /locus_tag="RHX79_001464"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008814576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HDV2196658.1"
                     /translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEA
                     RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL
                     ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ
                     EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK
                     DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII
                     NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV
                     REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTI
                     KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT
                     YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLK
                     NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL
                     QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL
                     IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK
                     QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR
                     EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA
                     VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE
                     LAKRGEIDKKVVADAIAKFNIDADKVNPRLA"
     gene            complement(34097..34861)
                     /gene="pdhR"
                     /locus_tag="RHX79_001465"
     CDS             complement(34097..34861)
                     /gene="pdhR"
                     /locus_tag="RHX79_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex transcriptional
                     repressor PdhR"
                     /protein_id="HDV2196659.1"
                     /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF
                     DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE
                     TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA
                     AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAR
                     EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN"
BASE COUNT         8799 a         9083 c         8423 g         8745 t
ORIGIN      
        1 tttggtaaca aatatcattg ctcattaata tctagcatct gcttataaca tttgtgtcat
       61 gaatagtcat tcttcaaacc agtagtctga ctaatggaat tttattcaag gatttttatg
      121 tctaaaaaat taggttttgc cctgtctggt cttatgctgg caatggttgc aggtactgct
      181 tctgctgata tggatggtgg tcagttaaat atcagtggtc tggttgttga taacacctgt
      241 gaaacccgcg ttgacggcgg taataaagat ggtctgatcc tgctgcaaac tgcaactgtt
      301 ggtgaaatcg atgctggcgt gctgaatgac accgttggcg ctaaagccaa acctttcagc
      361 atcaccgttg actgcagcaa agcaaatccg aatccaggta gtacagctaa aatgaccttc
      421 gattctgttt tctttggtaa tagcaaagga acgctgaaca acgacatgtc tattaacaac
      481 ccttctgacg gcgtgaatat cgctctgcac aatattgatg gttccactat caaacaggtt
      541 caaattaaca accctggcga tgtgtatact aaagccctgg atgcaacgac aaaatctgct
      601 gtttatgatt ttaaagcgtc ttacgttcgt gccgtcgcag accaaacagc aactgctggt
      661 tatgtaaaaa ctaacactgc atacaccatt acttatcagt aagtattcac caattaaatt
      721 gattgaatga atatacaggg aatagtatta ataatttcta tttttatatt attccctgtt
      781 ttaattaact ctgtcaggga tggtttatgt tttttaacat caaacataca acagctttat
      841 gcttcgtaac ctgtatggct tttagttcat cgtctattgc ggacattgtc atttcgggta
      901 ctcgcgtaat atataaaagc gatcaaaaaa gtgtcaacgt acgtctggaa aataaaggga
      961 ataacccgtt gcttgtccag agttggttag atactggcga tgacaacgct gagcctggca
     1021 gtattacagt cccttttact gccacgccgc cagtatcgcg tattgatgcc aaacgtgggc
     1081 aaacaatcaa attaatgtac acagccagca cctcactgcc taaagacaga gagagcgtgt
     1141 tctggtttaa cgtactggaa gttccaccaa aaccagatgc agaaaaggtc gcgaatcaaa
     1201 gtctgctgca actggcattt cgcacacgta taaaactttt ctatcgcccg gatggattga
     1261 agggaaatcc ctctgaagcc ccgttagccc tgaagtggtt ctggtcaggt tcagaaggta
     1321 aggcgtcatt gcgagtgacc aatccaaccc cttactacgt ctcttttagc agtggtgatt
     1381 tagaagctag cggtaaacgc tatccgattg atgtgaaaat gattgcacca tttagtgatg
     1441 aggtcatgaa agtcactggc cttaatggca aagcaagttc tgcaaaagta catttttacg
     1501 ccattaatga ttttggtggc gccattgaag gtaatgccag tctgtaatca ggcaaggata
     1561 taattccgca ggaagcataa cgtgactata aaaccaacta aaaattatca taatcatctg
     1621 acccgtatcg ctacgttttg cgcgctgctg tattgcaaaa gtgctttctg tgctgaactt
     1681 gttgaatatg accatacctt cctgatgggg cagaatgcct caaatattga tctcagccgg
     1741 tatagtgaag gtaaccctgc tataccgggt atgtacgacg tcagtgttta tgtcaacgat
     1801 caacctatta ttaaccaaag cattacattt attgaaattg aaggaaaaaa aaacgcccaa
     1861 gcctgtatca cacttaagaa tttattgcag tttcatataa attctcccga tataaataac
     1921 gaaaaagccg ttctgcttgc cagggatgaa acactcggca attgccttaa tttgacggaa
     1981 attatccctc aggcttctgt tcgttatgac gttaacgagc aacgtctgga tatagacgtt
     2041 cctcaggcat gggtaatgaa aaattaccaa aactatgttg atccatcgtt atgggaaaat
     2101 ggcattaatg cggccatgtt gtcatacaac ctcaacggat atcatagtga aactcctggt
     2161 cgaagaaatg acagcattta tgctgctttt aacggtggga tgaatttagg tgcatggcga
     2221 ctgcgtgcct caggcaacta caactggatg accgattctg gcagtaatta tgattttaag
     2281 aatcggtata tacagcgtga tatcgcctcg ctgcgttctc aactcattct tggtgagtct
     2341 tatacaacgg gcgaaacctt tgattctgtc agtatccgcg gcattcgttt atacagcgac
     2401 agccgcatgt tgcctccgac attagcgagt tttgcgccta tcattcatgg cgttgctaat
     2461 accaacgcca aagtcactat tacgcaaggt ggctataaga tttatgaaac gactgtgccg
     2521 ccaggcgctt tcgtcattga tgatctgagt ccgtcaggtt acggcagcga tcttattgtt
     2581 actgtcgaag aatccgatgg ctcaaagcgg acattctcgc aacctttttc atcggtcgtt
     2641 caaatgttac gccctggcgt tggacgttgg gatattagcg gcggccaggt cttaaaagat
     2701 gatattcagg atgagcctaa tttatttcag gccagctact actacggtct gaataactat
     2761 ctaacgggtt atactggtat tcagattacc gataataact ataccgctgg tttgttaggt
     2821 cttggtctga atacttcagt cggtgcattt tctttcgatg tgactcactc caatgttcgt
     2881 ataccggatg ataaaacata tcagggacaa agttatcgtg tttcctggaa caagttattc
     2941 gaagaaacaa gtacttcact gaatatcgcg gcctatcgct attcgacaca gaattacctt
     3001 ggtcttaatg atgcactaac tctaattgat gaagtgaaac atcccgaaca agatcttgaa
     3061 ccgaaatcca tgcgtaatta ctcgcgcatg aaaaatcagg ttacggtcag tattaaccaa
     3121 ccgctaaaat ttgagaaaaa agattacggt tcattttatc tttccggaag ttggtccgat
     3181 tactgggctt ccggacaaaa tcgtagcaat tactctattg gctacagtaa cagtgcatcc
     3241 tggggcagct acagtgtcag tgcccagcgt tcatggaatg aagacggcga cactgacgat
     3301 agcgtttatc tcagtttcac cattcctatt gaaaaattac ttggcactga acaacggact
     3361 tcaggtttcc agagtattga tactcaaatg agcagtgact ttaagggtaa taaccaactc
     3421 aacgtcagta gcagtggcta tagtgataac gctcgcgtca gttatagcgt aaatactggc
     3481 tatacgatga ataaagccag caaagatttg agttatgttg ggggttatgc cagctatgaa
     3541 tcaccgtggg gaagcctggc aggttcagtt tctgcaaata gcgataacag tcgtcaagtg
     3601 tctctcagca ccgacggtgg ttttgtattg catagcggcg gcctgacctt cagtaatgac
     3661 agttttagcg actccgatac actggcggta gttcaggctc caggtgctca aggagcgcga
     3721 ataaattatg gcaacagtac tatcgatcga tggggttatg gtgtcaccag cgctctttct
     3781 ccttatcatg aaaaccgtat cgcgctggat atcaacgatc ttgagaacga tgttgaatta
     3841 aaaagtacca gtgcagtagc tgtaccgcgt cagggttcag tcgtctttgc tgattttgaa
     3901 accgtgcaag ggcaatcagc cattatgaac atcacacgaa gtgatggtaa aaatattcca
     3961 tttgctgcag atatttatga tgagcaaggc aatgtcattg gtaatgttgg acagggtgga
     4021 caagcatttg ttcgtggtat tgagcagcag ggaaatatca gcattaaatg gctcgaagaa
     4081 agtaaacccg taagttgtct tgcgcattat caacaaagtt cagaagcaga aaaaatagcg
     4141 caatctatta ttctgaatgg aattcggtgt cagattcagt aactacaagg gacgtcaaat
     4201 gataaaaata acgccacata aaatagcgat actgatggga atattattat caccatcagt
     4261 atttgcaacg gatattaatg tagagtttac agccactgtc aaagcgacaa cctgtaacat
     4321 cacacttact ggtaataacg tcacgaatga tggcaataat aactacacat tgagaatccc
     4381 taagatgggt ctggataaga tcgcgaataa aacgacagaa tctcaggctg attttaaact
     4441 ggttgctagt gggtgcagca gtggcatcag ttggattgat accactctga ccggaaatgc
     4501 atcatcaagc tcacctaagc ttattatacc gcagtctggt gattcatctt cgacgacaag
     4561 taatatcggt atgggtttca aaaaacggac tactgatgat gccactttcc ttaaacctaa
     4621 cagtgcggaa aagatacgct ggagcacaga cgagatgcag cccgataagg gtcttgaaat
     4681 gaccgttgcg ctacgtgaaa cagatgcagg gcaaggcgta ccggggaatt ttcgtgcact
     4741 ggcaacgttt aatttcatct atcaataaga aggataatta agatgacatt taaaaattta
     4801 cgttatggat tatccagcag tgtcgttttg gctgcctcat tgttcagcgt accctcttat
     4861 gcggcaacag acagcattgg gctgaccgtg attactaccg tagaaatagg tacttgtact
     4921 gctacattag taaatgactc tgatcaggac atttctgttg ttgactttgg cgatgtatat
     4981 atttctgaaa tcaatgccaa gaccaaagtt aaaacattca aactcaaatt caaagactgt
     5041 gcgggtatcc ccaataaaaa agcacaaata aaattaacca agcgagccac atgcgaaggt
     5101 actgctaatg acggtgcggg gttcgcaaat ggatccacag ccgcagataa agcaagtgcc
     5161 gtcgccgttg aagtctggag caccgaaact ccggcaacag gtagcgcaac acaatttagt
     5221 tgtgtgacac cagcatctca agaggtcact atctccaatg cagccaacgc ggttgtttat
     5281 tatccgatga gtgctcgact ggtcgtcgaa aaaaataaaa ccgtaagcaa tgtcactgcg
     5341 ggtaaatttt ctgcacctgc cacatttaca gtaacctata actaacagac tgacagatcc
     5401 aggaactata tatgcatccc actcaacgta agctgatgaa gagaataatt ctgtttctgt
     5461 cactacagtt tcccattacc tatccagcca tcgctgggca ggatattgac cttgttgcca
     5521 atgtaaaaaa cagcacttgc aaaagcggaa tcagtaacca gggtaatatt gatcttggcg
     5581 tcgttggggt gggatatttt tcagataatg ttactcctga aagctatcaa ccaggtggaa
     5641 aagagttcac tgtcacagta tcagactgtg cattacaggg aactggcgat gtgcttaatc
     5701 agttacatat tgattttaga gcccttagcg gtgtcatggc tgcaggttca aggcaaatat
     5761 ttgccaatga agtcgcaacc ggggctaaaa atgtcggtgt cgttctcttt tccattcagg
     5821 acccgaccaa tatattcaat gttattagtt cagcaggaaa ttctcgttcc gtgtatccag
     5881 taatgacttc tgccctgcat aattcttcat ggaaatttta tgccagaatg caaaaaatcg
     5941 atcccgcgct ggatgtcata tctggccagg taatgagtca tatattagtt gatgtgtact
     6001 acgaataata gatcaaaaca aataactgcg actgttacag cagtagatgg tggagtgata
     6061 atgaagaaat tcttcagaca ttttcttttt ttaattctgt gcttgagttg ttataccgcg
     6121 agtgctggca ctgatgataa cgtaggatat attgttggga atagttacgg cgttggtccg
     6181 tcagatcaaa aatggagaga aacggggccg aatggcgatg ctactgtcat attcagatat
     6241 gcaacaagta caaataattt agttttctac aaaccgacgc agcttggacc tacaggtgta
     6301 aaattacagt ggagtcagtt agataccgct tctggtggtg gttttcttta ttgcaacaga
     6361 agtgatagca caagtggtag cgcaatgcgt attgaaaatg caatggttga ctcaggtaaa
     6421 atgtatggct cccataaatt atttaataca tcagttcctg gtttgtatta cacattatta
     6481 atttcaaaca tgtggtcagc ttacggtacc gtaactaacg ttagttcacc tgggatatac
     6541 attggtgact ctgcagaaca atatttttcg tggtataatc caagcgaaga cgtgttatat
     6601 tggagttgca ataatgcgaa tagcacccgt aaatactggg ctgtaggtgg tatttatcag
     6661 acccttacaa ttgaattcta tacagataca aactttgatc caacagtaac tcaacagatc
     6721 aaattatcca gctcatcaaa ttatctgtat tcatttaaag cctatggcgc aggccaaggt
     6781 ataaatgagc atagttattt tatcaaaatc gatttcgatc tgctcaatgt caagttgact
     6841 aatcccactt gttttaccgc tatgcttagt ggaacttctg tgactggttc tacggtaaaa
     6901 atgggtgaat atagtgcaga acaaatcaga aacggtgcca caccggttcc ttttgatatt
     6961 tcacttcaaa actgcgttcg tgtgactaat attgagacaa aattagtttc aacaaaggtt
     7021 ggtactgaaa acgggcaact ccttggtaat actctcacag gtaatgacgc agcaaaagga
     7081 gtcggtgtac tcatagaagg tttagcaact agtaaaaatc ctctaatgac attgaaacct
     7141 aatgattcaa attctgttta taaagattac gacccgagag gcaaagacga tacaacagga
     7201 ggagtttacc cggatcaaga tacaggtata acataccctc tccatttcca ggccacgcta
     7261 caacaggatg gaactatacc aatagaagct ggtgagttta aagccaccag tactttccag
     7321 gtaacctacc cttaataagt ccaccgcacc gccatcatct ggcggtgcgg taattgataa
     7381 atcattgccc ccaccaatgt gactgataaa atgccaggca acacgacatc atttatcagg
     7441 acacgttatg aaaccgacca ccattgcttc acttcagaaa tgtaagcagg ataaaaagcg
     7501 tttcgcgacc atcaccgctt acgactacag cttcgcgaaa ctatttgctg atgaaggact
     7561 taacgtcatg ctggtaggcg attcgctggg catgacggtt cagggccacg actccaccct
     7621 tcccgttacc gtcgaggata tcgcctacca cactgccgcc gtacgtcgcg gcgcgccaaa
     7681 ctgcctgctg ctggctgatc tgccgtttat ggcgtatgcc acgccggaac aagcctttga
     7741 aaacgccgca acggttatgc gtgccggtgc caatatggtc aaaattgagg gcggtgagtg
     7801 gctggtcgaa accgtaaaaa tgctgaccga acgtgccgtt cctgtatgtg gtcacttagg
     7861 tttaacccca cagtcagtga atattttcgg tggctacaaa gttcaggggc gcggcgatga
     7921 agcgggcgat caactgctca gcgatgcatt agccttagaa gccgctgggg cacagctgct
     7981 ggtgctggaa tgcgtgccgg ttgaactggc aaaacgtatt accgatgcac tggcgatccc
     8041 ggttattggc attggcgcag gcaacgtcac tgacgggcag atcctcgtga tgcacgacgc
     8101 cttcggcatt accggcggtc acattcctaa attcgctaaa aatttcctcg ccgaaacggg
     8161 cgacatccgc gcggctgtgc ggcagtatat ggctgaagtg gagtccggcg tttatccggg
     8221 cgaagaacac agtttccatt aaggagtcac gttgtgttaa ttatcgaaac cctgccgctg
     8281 ctgcgtcagc aaattcgccg cctgcgtatg gaaggcaagc gcgtggcgct ggtgcctact
     8341 atgggtaatc tgcacgatgg ccatatgaag ctggtcgacg aagccaaagc ccgcgccgat
     8401 gtggtcgtcg tcagtatttt cgttaaccca atgcagtttg accgcccgga agatctggct
     8461 cgttatccac ggaccttgca agaggactgc gaaaagctaa acaaacgtaa agtggattta
     8521 gttttcgccc cttcggtaaa agagatctac ccgaacggta ctgaaaccca cacttacgtt
     8581 gacgttcctg gcctttcgac catgctggaa ggtgccagcc gtccgggaca ttttcgcggc
     8641 gtttcgacta ttgtcagcaa gctgttcaac ctggtccagc cggacatcgc ctgcttcggt
     8701 gaaaaggact ttcagcaact ggcgctaatc cgcaaaatgg ttgccgatat gggcttcgat
     8761 attgagattg tcggtgtgcc aattatgcgc gccaaagatg gccttgcgct cagttcccgt
     8821 aatggttatc tgacggcgga acaacgcaaa attgcgcccg gtctgtacaa agttttaagt
     8881 tcaattgccg acaaattgca ggctggggaa cgggatctcg atgaaattat taccattgcg
     8941 gggcaagaac tgaatgaaaa aggcttccgc gccgatgata ttcagattcg cgatgccgac
     9001 acattgctgg aagtttctga aaccagcaaa cgggcagtaa ttctggtagc cgcctggctt
     9061 ggcgatgctc gcctgatcga caacaaaatg gtcgagctgg cgtaatactt aactggcgct
     9121 acggctgatg gcgccagtta ttaatttacc ccacgtcatc tgtcataaca caggtaactt
     9181 aaataaggtt aattacctta tcaatctcag caagaggtaa atttgccatc tctgcaacgt
     9241 cttcccgaga cattccttta cttagaagac gcagggcgaa ttcttgcctt tcctcctgtc
     9301 ttccctgctg aatccccttc tcaatccctt tctcttcaaa ccactgcgcc agcgtcatca
     9361 tagactcccc tcccgtttcc ctgtctctca gcacaccata aaacaaatcc gcttgttcag
     9421 tatgaccgcg ttgcagcata tagttttgca tggcaactaa ctgacttccg ctagtgtacc
     9481 cttcgtcaat cagcgtgacc agttgctcca gcaataacat taagtcgcgc tggcgaatat
     9541 gtttttgcag tagttcgaga atcgcaatcc gccgatgttg catgatttcg tcatccggtg
     9601 tgatggtgat atccaccagc gggaaaggac tgttatagac gcgtcgtgcc agctccggcg
     9661 agtaaaatat atcaaaccag cacattgaga gcggataagg tgtggcctcg ccctgataaa
     9721 acagtatcgg caccaccagc ggcagcttat cgtgatccgc ctccagatgc cggtgcatgg
     9781 cagcaataga ataacgcatc atgcgaaagg ccattttctt atccggcttg ctttggtgtt
     9841 caatcacaac atgcagataa ccgggattgc cctgcatttg cacggaatag agcacgtccg
     9901 tgctgtgtcc tttcaggctc tcttcaatga aactccccga ctctaaatga agcgtgttga
     9961 ggtcacaaag ttctcgtaat tccactggca aatgtatctc cagaaagtcg cgagccgtct
    10021 ccgcatgcat taaaaattgt ttaaataccg cgtcatgcgg tgtggtactc ggtgcatcca
    10081 tcttccctgt cttccgtgtt gtcttgcgtg aaggcagtat ccagtcaagg cgcgccgtcg
    10141 tcagccgcct ctttagtgtt taccgagcag cgttcagaga aatttcaatt cgttacaggc
    10201 gttacatggc acgcttcggc gcggtacgca aactgctgac gcaaatgcca tcagatgagt
    10261 agacactcat caaaaatcgg gcaatactgc gtgagaattt cctcaaagca ggcatcgcct
    10321 gcttcgttaa cgacagggta gaaaggtaga agttatgatt cgcacgatgc tgcagggcaa
    10381 actccaccgc gtgaaagtga ctcatgcgga cctgcactat gaaggttctt gcgccattga
    10441 ccaggatttt cttgacgcag ccggtattct cgaaaacgaa gccattgata tctggaatgt
    10501 caccaacggc aagcgtttct ccacttatgc catcgcggca gaacgcggtt cgagaattat
    10561 ttctgttaac ggtgcggcgg cccactgcgc cagtgtcggc gatattgtca tcatcgccag
    10621 cttcgttacc atgccagatg aagaagctcg cacctggcga cccaatgtcg cctattttga
    10681 aggcgacaat gaaatgaaac gtaccgcgaa agcgattccg gtacaggttg cttgattgtt
    10741 atccctgcgg ctggttactc accagccgcg acatcgtctc cagcgaatcc gttcttaaga
    10801 tataaagtcg ttttagtaac aacggattat cccccggttt tactttgcct ttcatggttg
    10861 tcaccgccag gtgaaatccg gcatcgtttg ctgccttcac ggctttgtca ttaaatccgc
    10921 caaacggata cgaaagatac cagacatgcg gattaaattg cgccagagcg cggcgtgaac
    10981 gtgcaaaatc aaacagaata ttgtgctcac tacggctcag taatatgggt cggcgatagc
    11041 catccacccg atgcaaaaaa tgggtatgtg actgaaaatc aaaaacatcg cgaatttcgt
    11101 taagctcaga aacgctcata aattgcagcg attttgggtt ccacttctgc gggtgacgtt
    11161 tgatgcgcga ggtaacaaca aacgccgtcg ccttcatgcc atattgtttc aatacaggat
    11221 acgcatagcg gctcaccgac ttgaggccat catcaaaggt aatcaccacc gctcgcgcag
    11281 ggagattgat cttattcttc acgtaacctt ccagctgcgc catgctcagt gtcgcgtatc
    11341 ccctgtcgcg cagccaggcc atctggttat tgaaagcgcg taccgaggtg gtcgtcgaag
    11401 tatggcgaaa acgggtgttt tcttcatcgc gcagaatatg gtgataggtt agcaccggca
    11461 ggccattatc gggttgggca tccagcgcgc tgatataggc gagtcgatcg ccaatacgga
    11521 tctgatacca ggtttgattt aacctgtctt tcagtttatg caaaatcggg tagcgcaaat
    11581 tgtccgccag taccccaaat ggcgcactgc ccgcactcgg cgcgttatag accggcgtat
    11641 ctttccaggt aattaagttc tgattactca gcggcttgtt gaggtcaccc aaaccgtctt
    11701 caactttttg tcgcccctga actggctcga gatgcccttt atcgataaac cctttaccaa
    11761 agccaaaatt aaatgcgtaa taacttgcgg cagtgggctc cacggcaatg atttgcccgg
    11821 cccgaatatt ccccacggtc accatcttgt cgccaatttg cgcccagatc gcagcatttt
    11881 cgatggtttg catataacgg gcaggtaacg cggcactgac acttgcggta aacagcatca
    11941 gcaggagaat aacagcttgt ttgtacatga aaaaataacc gagggtgaaa caacgctttt
    12001 attgtagcaa aagcgctata agaatcgtgg gttaatactc atacaaatta tgtttgagga
    12061 cgaaaggcgg atttttttgt tgttggtgcc aaagactact cacctccggc ccacccagtt
    12121 cgacaatacg ctcgcgaaac tctgaactgg tcatggtttc acggcaagcc atcatctgtt
    12181 caattaacgg taacgtgaca ccagaaatca cttcacaacg ggagtgttta tggcttaata
    12241 atgaagccac gcggtacggt ggcgctccgg ctaaatcggt taagaagatg acaccctcac
    12301 cagagtccgc ttcatgcaga gcatcgcaca tcatgcggct gagcatatta gagcttaatc
    12361 cgcgccagaa attcacggcc cggcactgaa gaagtgcccc atgttttttc tccagcgcat
    12421 ccagtatctc ttgcgcccgg tcatcgtgac aggtaattac ccaacctaac atcgccttcc
    12481 tccttagccg aaaatcagtc taccctgacc attgttgata aagggtgata gccgtcaaaa
    12541 ctcctctccc ccgaatccag aggagaggaa atagccttag ctacgcaaac cacgtccacg
    12601 ttggatcagc gaccaacaga tcaaataaaa cgccacaata aagaccacca gtacgccaaa
    12661 ggtagtgacc agcggcacat catttatacc gaggaagccg tagcggaaac cactgatcat
    12721 ataaacgatt gggttcaggt gcgacagccc ttgccagaac ggcggcaaca aagtcaggga
    12781 gtaaaacacc ccgcccaaat acgtgagtgg cgttaacaca aaggttggca ccaggctgat
    12841 gtcatcgaac gttttggcaa acacgccgtt cagcaaaccc gcaagggaga atagcaccgc
    12901 cgtgagcacc agggttaagg caacgaatac ccacgaatgc acctgaaacg gcacaaaaaa
    12961 cagtgaaatt gccgtcacca gaatgccaac aaacagacca cgcgccacgc caccgccgac
    13021 atatccggca ataatgacgt gagtcggaac cggcgctacc agcagctctt caatattacg
    13081 ctggaacttg gcaccaaaaa atgatgacgc gacgttagcg taggcattgg tgatcaccga
    13141 catcatgatc agccccggta cgatgaactg catatagctg aagccatgca tatcgccaat
    13201 acgcgaacct atcaggttac cgaagataat aaagtaaagg gtcatggtga tgactggcgg
    13261 caccagcgtc tgcacccaga tacgcataaa gcgatggatc tctttcgccc agatgctttt
    13321 tagcgccacc cagtaaagat gcatcatgcg cgatctcctt gtttttcatt aaccagtgaa
    13381 acaaacagct cttccagacg gttagctttg ttacgcatac ttaatacctg aatgccctgc
    13441 tcacttaact gcgtaaatac gctgttgatc ccctgctcac gcagcacttc aacttccagc
    13501 gtcgcggtat cgaccagtcg atactgatag ccatcgagct tcggtaacgg acttttcggt
    13561 gcgagatcga gaataaaggt ttccgatttc agcttagcca gcagcgcctt catcgaggta
    13621 ttttccacca gctcaccgtg ttgaataatg ccgatattgc ggcacagcat ttctgcttct
    13681 tccaggtagt gtgtggtgag aatgatggtg gtgcctttgt cgtttaaatc cttcaaaaag
    13741 ccccacattg agcggcgaag ttcaatatcc acgcctgcgg tcggttcgtc gagaatcagt
    13801 agtttaggtt catgcattaa cgcacgggca atcattaaac ggcgcttcat cccgccagat
    13861 aacatgcgcg cacgttcgtt gcgttttccc cataaatcga gctgcttaag atatttttcg
    13921 ctgcggatgt acgcctcttt gcgctccaca ccgtagtacc ctgcctgatt caccacaatt
    13981 tgctgcacgg tttcaaacgg gttgaagtta aattcctgcg gcaccagtcc caactgacgt
    14041 ttagcgttca cgacatcctt ctcgagatcg taaccaaata cgctgacccg cccggaggtt
    14101 ttatttacca gagagctgat aataccgata gtggtcgatt tcccggcccc gttcggcccg
    14161 agaagcgcat aaaaatcacc cgcttcgacc tgcaaatcta ttccacgaag cgcctgaacg
    14221 ccgcctggat aggttttttt aagctgttga agttccagtg caatggtcat aaatttttac
    14281 ttaccttacg ttcttacact ttatctgtgg tttaaatcgt cccggagttg ccctatatta
    14341 gccaaacgta attatttggt tacaggtcgt taacctccat gaaagacata gatacactca
    14401 tcagcaacaa tgcactatgg tcaaaaatgc tggtggaaga ggatcccggg ttttttgaga
    14461 aactggcaca agcgcaaaaa ccgcgctttc tatggattgg atgttccgac agtcgcgttc
    14521 ctgcagaacg tttaaccggt cttgagccgg gcgaactctt tgttcaccgt aatgttgcta
    14581 acctggtcat tcacaccgac ctgaactgcc tttccgtggt tcagtatgca gtggatgtac
    14641 tcgaagttga acacattatt atctgtggcc actacggttg cggcggcgta caagccgccg
    14701 ttgaaaaccc ggaactgggg cttatcaaca actggctgct gcatatccgc gatatctggt
    14761 tcaaacatag ctcattgctc ggcgaaatgc cgcaagagcg ccgtctggat accttgtgtg
    14821 aactgaacgt catggaacag gtgtataacc tgggccactc caccattatg caatcagcgt
    14881 ggaaacgcgg gcagaaagtt accattcacg gctgggccta cggcattcac gacggcttgc
    14941 tgcgtgatct ggatgttacc gccaccaacc gcgaaaccct tgagcaacgt taccgtcacg
    15001 ggatttccaa cctcaagctg aaacacgcca accacaaata aaaatgccat gccggatgca
    15061 acacatccgg caacctcaca cttactcgtc cagcagaatc actttgccga tatacggcag
    15121 atgacggtaa cgctgtgcgt aatcaatgcc gtaacccacc acaaactcat ccgggatcga
    15181 gaaaccgata aattctaccg ggacgttcac ttcacgacgg gacggtttat ccagcagcgt
    15241 acaaatcgcc agcgacttcg gttcgcgcag gcttaagatc tcacgcactt tcgacagtgt
    15301 attccccgag tcgatgatat cttcaacaat cagcacgtcc ttgccacgga tatcttcatc
    15361 cagatctttg aggattttca catcacgggt ggtggacatg ccgctaccgt agctggaggc
    15421 ggtcataaag tcgacttcat gagatacctg aacttcacgg cacaggtccg ccataaacat
    15481 aaatgagcca cgcagcagac ccaccagcac catatcgctg ccgctgtctt tgtaacgctc
    15541 agtaatctga cgacccagtt cggcgatacg cgctttaatc tccgcttcgg ggatcattac
    15601 ttctacagta tgtttcatat ctctaaccat atgatttaaa aacaaatcac ttcgcacggg
    15661 caggttttgg caccgcaaca aagcgcaaga cacgcagtat accagtaaaa ctattcattc
    15721 gcggaatctg ttaataaagc tcgaattgtg atgacgatca cacatgttaa aacctataat
    15781 taattgctac taaaatatta atgaattgaa atggtgtctc tttatggcaa ttaacaatac
    15841 aggctcgcga cgattactcg tcacgctaac agcccttttt gcagcgcttt gcgggctgta
    15901 tctactcatt ggcggaggct ggctggtcgc gattggcggc tcctggtact accctatcgc
    15961 tggccttgtg atgctcggcg tcgcctggat gctgtggcgc agtaaacgtg ccgcgctttg
    16021 gctgtacgca gccctgctgc tcggcaccat gatttggggc gtctgggaag ttggtttcga
    16081 cttctgggcg ctgactccgc gcagcgacat tctggtcttc ttcggcatct ggctgatcct
    16141 gccgtttgtc tggcgtcgcc tggtcattcc tgccagcggc gcagttgccg cactggtggt
    16201 ggcactgctg attagcggtg gtatcctgac ctgggccgga tttaacgatc cgcaggaaat
    16261 caacggcacc ttaagcgcca atgccacacc tgcggaagct atctcacccg ttgccgatca
    16321 ggactggcct gcctatggtc gcaatcagga aggtcaacgc ttttcacctc tgaaacaaat
    16381 taacgccgat aacgtccata atctgaaaga agcctgggtg ttccgtactg gcgatgtgaa
    16441 gcagccgaac gatccgggcg aaatcaccaa tgaagtgacg ccgattaaag tgggcgacac
    16501 cctttacctg tgtaccgctc accagcgcct gtttgcgctc gatgccgcca gcggcaaaga
    16561 gaaatggcat tacgatcctg agctgaaaac taacgagtct ttccagcacg taacctgccg
    16621 tggcgtctct tatcatgaag ccaaagcaga aacggcttcg ccggaagtga tggcggattg
    16681 cccgcgtcgt atcattcttc cggtcaatga tggtcgactg attgcgatta acgctgaaaa
    16741 cggcaaactg tgcgaaacct tcgccaataa aggcgtgctc aatctgcaaa gcaatatgcc
    16801 agacaccaaa ccgggtctgt atgaaccgac ttcgccaccg attatcaccg ataaaaccat
    16861 cgtgatggcc ggttcagtta ccgataactt ctcaacccgc gaaacgtctg gcgtgatccg
    16921 tggttttgat gtcaacaccg gggagctgct gtgggctttt gatcccggcg cgaaagatcc
    16981 gaacgcaatc ccgtctgacg aacacacctt tacctttaac tcgccaaact cctgggcacc
    17041 agcggcctat gacgcgaagc tggatctggt ctatctgccg atgggcgtga ccacgccgga
    17101 tatctggggc ggtaaccgca caccggaaca ggaacgttat gccagctcga ttctggcgct
    17161 gaatgccact accgggaaac tggcgtggag ctaccagacc gttcaccacg acctgtggga
    17221 catggatctt ccggcacagc cgacgctggc ggacatcacc gttaatggtc agaaagtgcc
    17281 agttatttac gctccggcga aaaccggcaa catttttgtg ctcgatcgtc gtaatggcga
    17341 actggtggtt ccggcaccgg aaaaaccggt tccccaaggt gcagcgaaag gcgattacgt
    17401 aaccccaact caaccgtttt ctgaactgag cttccgtccg acgaaagatt tgagcggtgc
    17461 ggatatgtgg ggagccacca tgtttgacca gctggtgtgc cgcgtgatgt tccaccagat
    17521 gcgctatgaa ggcattttca ccccgccatc tgaacagggt acgctggtct tcccgggtaa
    17581 cctggggatg ttcgaatggg gcgggatttc cgttgatcca aatcgtgaag tggcaattgc
    17641 caacccaatg gcactgccgt ttgtttcgaa actgatccca cgcggtccgg gtaacccgat
    17701 ggagcagccg aaagatgcca aaggcacggg tacggaatcc ggcattcagc cacagtacgg
    17761 tgtaccgtat ggtgtcacgc tcaacccgtt cctctcaccg tttggtctgc cgtgtaaaca
    17821 gccagcatgg ggttatatct cggcgctgga tctgaaaacc aatgaagtgg tgtggaagaa
    17881 acgtattggt acgccgcaag acagtatgcc gttcccgatg cctgtaccgg tgccgttcaa
    17941 tatgggtatg ccgatgctgg gcgggccaat ctccacggcg ggtaacgtgc tgtttatcgc
    18001 tgctacggca gataactacc tgcgcgctta caacatgagc aacggtgaaa aactgtggca
    18061 gggccgttta ccagcgggtg gtcaggctac gccaatgacc tatgaagtga atggcaagca
    18121 gtatgtggtg atctccgcag gcggtcacgg ttcatttggt acgaagatgg gcgactatat
    18181 tgtggcttat gcgctgccgg atgatgtgaa gtaagacttg ctcagattgc tgacaacgtg
    18241 cgcgttgttc atgccggatg cggcgtgaac gccttatcca gcctacaaaa ttgtgcaaaa
    18301 tcaatggatt gcacagctag cgtaggcctg ataagcgtag cgcatcaggc agatttgcgt
    18361 ttgtcatcag tttaatgccc ggagagatcc gggcatattt ccgaatacgg tctttttata
    18421 ccgtaaaccc taacatcatc cccgtatctt catgctccag cagatggcag tgcgccatat
    18481 aagcatgttc tttcggtgca tcgtgattaa acttcaccag cacttcgctg acattacctt
    18541 ctaccttaac ggtatctttc cagcccgcgc gatgagccgc tggcggtttg ccattttctg
    18601 acaagatacg gaactgcgtg ccgtggatat ggaacggatg cagcatcatg tcgcccacgc
    18661 cagagataac ccaacgttcg tattgccctt tcgccgccgc aaacatcggc ttgttcatat
    18721 caaacgcctg accgttgatt ttgttggcat ggtggaaatc gaacttcccg ccgtggttca
    18781 tatgattcat attgccgtgc cccatatggc ccatcatctg gctgtgatcc atcccggcca
    18841 tcgcctgatc gccatatttc tccattagca tctgcatccc catcatatcg agcatcgggt
    18901 ccatagagag ttgcagcttg cgtaccgtca gcccttccag cgaaggtaac gcaggcaggc
    18961 tacttaatgt gtctggcaaa gcaccggagg cactaatagc aatcggctga atccgcatta
    19021 ccggatgagg cttatcaaac ggcgcaatcg ccatccccat ctggctgacc ggcagcgtca
    19081 ccaggtcaaa gggtttgttg tcgttaacct ccaccagcac ttcaaaacgc tcgcccatca
    19141 gcaccggcag ctcgttcacc ttcaccggtt caggtagcag accaccgtcg ctggcaatca
    19201 catacagcgg gcgattgtcg ctggtggcga aattgagcga gcgggcatta cagccattga
    19261 gcaaacgcag gcgcagccaa ccacgcgggg cagcgtgttg tgggtagatt gcaccgttgg
    19321 tcagcagcgt atcgccaaac cagcccacgg cggcggtcat cacatccagt tgataatcaa
    19381 tctgcccatc agcgttaaat tttttatcct gaacaatcac cggaacatca tcgatacccc
    19441 actgttttgg cagcattaat ttcaggatct cgtcatcttc aattaccacc agcccagcca
    19501 accccatcgc cacctgtcgc ccggtcttgc catgttgatg tggatggaac cagcaagtag
    19561 cggcaggttg atcaacgttc aacgtcaccg agcgcttgcc acctggcaga ataattccct
    19621 gcgggccgcc gtcgacttca cccggtactt ccagcccgtg ccagtgcaac gttgtctctt
    19681 ccgtcagttg gttgtagata tcaaccgtta ccgctttgcc gcgctgtaat ttcaccgccg
    19741 gccccagcag attgccgtta tagccccagg tagttgcagt tttcccgcca aaggtggact
    19801 ggcctgcgcc aatagttaac tgaatgcgat tacgggcatc ggtcgtgagc aaatcaggga
    19861 tcggtaacgt tgggcgttct gccgcaaata ctgcgcggct ccacagcggc aaagccgaag
    19921 ccacacccag cgcgacggaa tattttaaga aatcacgacg ttgcatagtt atttccttat
    19981 tcttaagcag gcgaaacaaa atcaaacgtt gagcatagtc cttcccctta cgggaaggtc
    20041 aagccgcaga cacaatttaa tcgacaataa tggtcgtcgc ctcgctcgca gtgtgctaac
    20101 gtttatcttc tttaagcccc tggtagaagc aatgaagacg tttttcagaa cagtgttatt
    20161 cggcagcctg atggccgtct gcgcaaacag ttacgcgctc agcgagtctg aagccgaaga
    20221 tatggccgat ttaacggcag tttttgtctt tctgaagaac gattgtggtt accagaactt
    20281 acctaacggg caaattcgtc gcgcactggt ctttttcgct cagcaaaacc agtgggacct
    20341 cagtaattac gacaccttcg acatgaaagc cctcggtgaa gacagctacc gcgatctcag
    20401 cggcattggc attcccgtcg ctaaaaaatg caaagccctg gcccgcgatt ccttaagcct
    20461 gcttgcctac gtcaaataat ccctgatacc tttttgtaga aatattgacc gtgcatccgc
    20521 ggtcaatgtt agctattatg ttgcgccctt tttttacggg tgttaacaaa ggaggtatca
    20581 acccatggcc gaaaaaaaac agtggcatga aacgctacac gaccagtttg ggcagtactt
    20641 tgcggtagat aacgttctgt atcatgaaaa gaccgatcac caggatctga tcatttttga
    20701 gaacgctgca tttggtcgcg taatggcgct ggatggcgta gtacaaacca ccgagcgcga
    20761 cgagtttatc tatcatgaga tgatgaccca tgttccgcta ctggcccatg gtcacgcgaa
    20821 acatgtgctg attatcggcg gcggcgacgg tgccatgctg cgtgaagtaa cccgacataa
    20881 aaacgttgag tcaatcacga tggtggaaat cgatgcgggt gtcgtatcgt tctgccgtca
    20941 gtatctaccc aaccataacg ccggtagcta cgacgatccg cgctttaagc tggtgatcga
    21001 cgatggcgtc aatttcgtta atcaaaccag ccagaccttt gatgtcatta tctccgactg
    21061 caccgatcct atcggtcccg gcgaaagcct tttcacttcg gcattttatg aaggctgcaa
    21121 acgttgcctg aatcctggcg gtatcttcgt cgcacaaaac ggcgtctgct ttttacagca
    21181 ggaagaagcc atcgacagcc atcgcaaact cagccattac ttcagcgacg ttggctttta
    21241 tcaggcggcg atcccgacct attacggcgg tatcatgact tttgcatggg cgacagataa
    21301 cgacgcctta cgccatctct caaccgaaat tattcaggcg cgttttctcg cctctggcct
    21361 gaaatgccgt tattacaatc cggcaatcca tacggcagct tttgccttac ctcagtatct
    21421 gcaagacgca ctggcttcac agccgtccta aggagaagat aagaaattga aaaaactgaa
    21481 actgcatggc tttaataatc tgaccaaaag tctgagtttt tgtatttacg atatctgcta
    21541 cgccaaaact gccgaagagc gcgacggtta tattgcttat atcgatgaac tctataatgc
    21601 caaccgtctg accgaaatcc tgtcagaaac ctgttccatt atcggggcca atattcttaa
    21661 catcgcccgc caggattacg aaccacaggg tgccagcgtc actattctgg tgagtgaaga
    21721 accggttgac ccgaaactca tcgacaaaac agaacacccc ggcccactgc cagaaacggt
    21781 cgttgcccat ctcgataaaa gtcatatttg cgtacatacc tacccggaaa gtcatcctga
    21841 aggcggttta tgtaccttcc gcgccgatat tgaagtctct acctgcggcg tgatttctcc
    21901 gctgaaggcg ctgaattacc tgatccacca gcttgagtcc gatatcgtaa ccattgatta
    21961 tcgcgtgcgc ggttttaccc gcgacattaa cggtatgaag cactttatcg accatgagat
    22021 taattcgatt cagaacttta tgtctgacga tatgaaggcg ctgtatgaca tggtggatgt
    22081 gaacgtctat caggaaaata tcttccatac caagatgttg cttaaagagt tcgaccttaa
    22141 gcactacatg ttccacacca aaccggaaga tttaaccgac agcgagcgcc aggaaattac
    22201 cgctgcgctg tggaaagaaa tgcgcgagat ttattacggg cgcaatatgc cagctgttta
    22261 acggctctgg cggagctccc aggctccgcc agatttattt acttctgctg cacgaaattg
    22321 cggtaagccg ccacgacctg cagaaaatcc tcaacgccgc atagcgacag gctttcttcg
    22381 tcgtagtagt tcatcccctc ttccatttca tcgccagcga attccagttg attggcgcga
    22441 accatcacct cttcaccgtc catccacagg gtgtattcat gccctgcccg ttgccaggac
    22501 cgttcgctac ctttcagtgc gtgcgctgct tgttccactt catcaagcaa ggccaggttt
    22561 tctttcacct cttcattaaa ccagtgcccg accacttcat gccccatgga catacgcacc
    22621 tttaccactc cggtaatatc gcgcagaaat tcgtaatcca tagtgtgttc ctctgctccc
    22681 ggcaatgcgc cgaaatcgca ttgcgccatt gatgtaatta tcgcagcctt accggagaaa
    22741 aacagcggaa cggcgatggt ttagaaataa aaaaatgccc gggaatctca ttcaccgggc
    22801 attgtgtcgt ttatgcgcag cgcgtgcgct tacttattac accgcagtct ggaaaatcac
    22861 cccatcggct ttttcggtgt actgagaaag ctggttgaag ttcagataac gataagtatc
    22921 aacggcagtt ttatctactt gcgccacgta ggtctggtac tcttccggcg tcggcagttt
    22981 gccaatcagc gccgcaacag ccgccagttc cgcagaagcc aggaagacat tcgcgccagt
    23041 acccagacgg ttcgggaagt tacgggtaga ggtggaaacc accgtcgcac cgtctgctac
    23101 acgcgcctgg ttacccatac acagagaaca gcccgggatc tcgatacgcg caccactctt
    23161 accgaagacg ctgtagtagc cttcttcagt caactgcgcg gcgtccatac gggttggcgg
    23221 tgccacccac aggcgggtcg gcagttggcc tttgtgcgcg tccagcagtt tacccgcagc
    23281 acggaagtga ccgatgttgg tcatgcagga accgataaat acttcgtcga tcttctcacc
    23341 ctgtaccgca gacagcggac gcgcgtcatc cgggtcgttc ggtgcacaga ggattggctc
    23401 tttaatatcc gccagatcga tgtcgatcac tgccgcgtat tcagcatctg catcggcttc
    23461 cagcagctca ggattcgcca gccatttttc catgccctga atacgacgtt ccagggtgcg
    23521 acgatcgccg taaccttccg cgatcatcca cttcagcagg acgatgttag agttcaggta
    23581 ttcgatgatc ggttctttgt tcagcttgat ggtacaacca gcggcagaac gctcggcgga
    23641 cgcatcggtc agttcaaatg cctgctcaac tttcagatcc ggcagacctt caatttccag
    23701 gatgcggcca gagaagatgt ttttcttgcc tttcttctca acggtcagca gaccttgttt
    23761 gatcgcatac agcggaatgg catgtaccag atcgcgcagg gtgatgcccg gctgcatttt
    23821 gcctttgaag cgcaccagaa cggattccgg catatccagc ggcattacgc ctgttgcggc
    23881 tgcaaatgcc accagaccag aacccgccgg gaaagagata ccgatcggga aacgggtatg
    23941 ggaatcacca ccggtaccga cggtatccgg cagcagcata cggttcagcc aggagtgaat
    24001 gacgccgtca cccggacgca gcgacacacc gccacggttc ataatgaagt ccggcagcgt
    24061 gtggtgcgtg ttcacgtcaa ctggcttcgg atacgccgcg gtgtggcaga aagactgcat
    24121 caccaggtca gccgagaagc ccaggcacgc caggtctttc agttcatcac gggtcatcgg
    24181 gccggtggtg tcctgggaac ctacagaagt cattttcggt tcacagtacg cgcccggacg
    24241 aatgcctttc acgccacagg cacggcctac cattttttgc gccagcgaga agccgcgatt
    24301 gctctcagcg acatctttcg cctgacggaa cacatcactg tgcggcagac caagtgcttc
    24361 acgcgctttg gtggtcaggc cacgcccgat aatcagcggg atacggccac cagcacgcac
    24421 ttcatcaatc agcacgtcgg ttttcagttc gaaggtcgcc agcagttcgc cggtttcgtg
    24481 gttacgcact tcacctttgt acgggtaaac gtcaatcacg tcgcccatgt tcaggttaga
    24541 gacgtcgact tcgattggca gtgcacccgc gtcttccatc gtgttaaaga agatgggtgc
    24601 aattttaccg ccgaggcaca aaccaccgcc gcgtttgttc ggcacatgtg gaatatcatc
    24661 gcccataaac cacagaacgg agttagtggc ggatttacgc gaagaacccg tacccacaac
    24721 gtcaccgacg tacgccagcg ggaaaccttt ctgttgcaga gcttcgattt gcttgatcgg
    24781 accaacaaca ccaggctggt ctggctcaat accttcacgg gcgtttttca gcatcgccag
    24841 cgcgtgcagt gggatatccg ggcgtgacca cgcatccggt gccggagaaa ggtcatcggt
    24901 gttagtttcg ccagtgactt tgaagacggt aacggtcagt ttttcagcca gcgccgggcg
    24961 attcaggaac cattcggcat ccgcccagga ctgcataacc tgcttcgcat attcgttgcc
    25021 tgctttcgct ttctcttcta cgtcatagaa gttatcgaac atcagcagcg tgtgagaaag
    25081 tgctttggca gcaataggtg ccagtttggc atcatccagc gcgtcgatca gcggatgaat
    25141 gttgtaacca ccctgcatgg tgcccagcag ttcgatggct ttttccggag tcagcagagg
    25201 ggatttggct tcgcctttcg cgatagcagc caggaagcct gctttgacat aggcggcttc
    25261 atcgacgcct gggggaacac ggttggttaa cagatctaac aggaattctt cttcgcccgc
    25321 gggcgggttt ttcagcagct ctacaagtgc ggccatttgg tttgcatcca ggggtttggg
    25381 cgcaatcccc tcagcggcac gctcagctac gtgcttacgg tattcttcta gcacgacggt
    25441 tctcctcgct ctcattgtca tagtgcggca ggcgattctc ttcacgctcc tgtgagacag
    25501 cagtttgtag ggtaaatgcc cagtaccgca acgggcagaa tagcaggatt ttgacgatgt
    25561 gttaatctgt ttacaaaaaa gcaacataaa aaagtggctg aatcgttaag gatggtctag
    25621 agattgtttc cctccgtaaa aacttcgtta attcgcatgg tgataatcac ctttctcaac
    25681 gaatcccaag attagtcaaa atttaaacta ctgcctcttt atactcggat tcacagcacc
    25741 tgcgggtggc agttcgccga ccattgcgat ttccttgaga tccgaattat gaaaatgact
    25801 ttgccgttta aaccccatgt gctggcgcta atttgcagtg ccgggctttg tgccgcctct
    25861 accgggctat atataaaaag ccgcacagtg gaagcgcctg tggaaccgca atcgacacaa
    25921 cagactgcgc ctgacatcac cgcagttacg cttcctgcaa cggtttccgc accgcccgta
    25981 acgcccgccg tcgtcaaatc cgcattcagc actgcacaaa tcgatcaatg ggttgcgcct
    26041 gtcgcgctgt accccgattc tctgctttca caagtgttaa tggcatcaac ctatccggca
    26101 aacgttgctc aagcagtgca atggtcgcac gataatccac ttaaacaagg cgatgctgct
    26161 attcaggcag tatctgacca gccgtgggac gccagcgtta aatcactggt ggcctttcca
    26221 caattgatgg cattgatggg cgaaaacccg caatgggtgc aaaacctggg cgatgctttt
    26281 ctggcgcagc cgcaggacgt gatggactcg gtacagcgat tgcggcaact ggcgcaacaa
    26341 accggctcgc tgaagtcatc aaccgaacag aaagttatta ccacaacgaa gaaagctgta
    26401 ccggtaacac agacagtcac ggctcccgtc ataccatcca ataccgtttc aactgccagc
    26461 cccatcatta cagagcctgc aacaaccgtc atttccattg agcccgccaa tcctgatgtg
    26521 gtctatattc ccaactacaa cccaaccgtg gtttacggga actgggccaa tactgcgtat
    26581 ccgccggttt atctgccacc accagccgga gaaccgttta ttgacagctt tgtgcgcgga
    26641 ttcggctata gcatgggtgt tgctaccacg tacgcactat tcagcagcat cgactgggac
    26701 gacgacgatc atgaccatca tcatcatgac gatgatgatt atcatcacca cgatggcggt
    26761 catcgtgacg gtaatggctg gcaacacaac ggcgacaaca tcaatatcga cgtcaacaat
    26821 ttcaaccgta tcaccggtga gcatcttact gataagaata tggcatggcg gcacaatcca
    26881 aactaccgta atggtgtgcc ctatcatgat caggatatgg caaagcggtt tcatcaaacc
    26941 gatgtcaacg gcggaatgag tgccacgcag ctacctgctc caacacgcga cagccagcgt
    27001 caggcggcag caagtcagtt tcagcaacga acacacgccg cccccgtcat tacacgagat
    27061 acccaacgtc aggcagcggc acagcggttt aatgaagctg aacactatgg gagctatgac
    27121 gacttccgcg acttcagccg tcgccaaccc ctgacccagc aacaaaagga cgccgctcgt
    27181 cagcgttatc agtccgcctc gcctgagcag cgccaggcgg ttcgcgagaa aatgcagact
    27241 aacccacaga accagcagcg aagagaggca gcgcgtgagc gtattcagtc tgcaactccc
    27301 gaacagcgcc aggtatttaa ggaaaaagta cagcagcgcc cactgaacca acagcaacgt
    27361 gataacgccc gccagcgtat acaatcggca tcacctcaac aacgtcaggt ttttcgggaa
    27421 aaagttcagg agagccgccc acaacgtcta aacgacagta accatactgt caggctgaat
    27481 aacgagcaac ggtcagcagt acgcgaacgt ctctctgagc gcggagcaag gcgacaggaa
    27541 aggtaaattg cagacgtaaa aaaagcggcg tggttagccg cttttttaat tgccggatgt
    27601 tccggcaaac gaacaattac ttcttcttcg ctttcgggtt cggcaggtcg gtaatgctac
    27661 cttcgaacac ttctgccgcc aggcccacag actcgtgcag agtcgggtgc gcgtggatgg
    27721 tcagtgcgat gtcttcagca tcacaaccca tttcgattgc caggccgatt tcacccagca
    27781 gctcgccgcc gttggtaccg acaatcgcac caccgatcac acggtgagat tctttgtcga
    27841 aaatcagctt ggtcataccg tctgcgcagt cggaagcgat agcacgacca gaagcagccc
    27901 acgggaaggt ggcggtttca tagctgatgc ctttctcttt cgcttctttc tcagtcagac
    27961 ctacccatgc aacttctggt tcggtatagg cgatggacgg gataactttc ggatcgaagt
    28021 agtgtttctt accggcgata acttcagcgg caacgtgacc ttcgtgaaca cctttgtgtg
    28081 ccagcatcgg ctgaccgacg atatcgccga tagcaaagat gtgcggtacg ttggtacgca
    28141 gctgtttgtc aacgcggatg aaaccacggt cgtccacttc cacgccagct ttgcctgcgt
    28201 cgaggttttt accgttcggc acacgaccaa tcgctaccag cacggcgtcg taacgctgcg
    28261 gttcagcggg tgcttttttg ccttccatcg tcacataaat accgtcttct ttcgcttcaa
    28321 cggcggtaac tttggtttcc agcatcaggt tgaatttctt gctgatacgc ttggtgaaga
    28381 ctttaacgat gtctttgtca gctgccggga taacctggtc gaacatttca accacgtcaa
    28441 tctgtgaacc cagcgcgtgg tatacggtgc ccatttccag accgatgata ccgccaccca
    28501 ttaccagcag gcgttctggt acttctttca gttccagcgc gtcagtggag tcccagatac
    28561 gcggatcttc atgcggaata aacggcagtt ggatcgggcg agaacccgct gcaatgatcg
    28621 cattgtcgaa gttgatcacg gttttgccgt tctcaccttc aacttccagg gtgttagccc
    28681 cggtgaattt acccagaccg ttgaccactt tgactttgcg gcctttcgcc ataccagcca
    28741 gaccaccggt cagctgattg atcactttct ctttccaggt acgaatcttg tcaatatcgg
    28801 ttttcggttc gccgaagacg ataccgtgtt cagccagcgc tttggcttct tcgataactt
    28861 ttgctacgtg cagcagtgct ttagaaggga tacagccgac gttcaggcaa acaccgccaa
    28921 gggtgttgta acgttctacg attacggttt ccagacctaa atcagcgcaa cggaaggcag
    28981 cggagtaacc tgcggggcct gccccaagta ccacgacctg agttttgatt tcagtactca
    29041 tcatgacctc tatatattta tctccggcgg tcatacccgt cgtctttcag gccgcagcgg
    29101 cgttagcttc acgccctcac cccagtcact tacttatgta agctcctggg gattctggcg
    29161 cttgctacct tgctgcaccc agaaatccat agggtatgtg aagtaatacc ctaaccacca
    29221 ccgggtcgtt ctatccgtcg gtattttaca aaattgttaa caatttttaa acaacaaacg
    29281 gcaaccgatt tgtctattcg ctaataacct caatacattc atgagattac cagaaaaaag
    29341 ccggccgttg ggccggctct tttacttaca tcaccagacg gcgaatgtca gacagcgtgt
    29401 tgttaatgat ggtaatgaaa cgggcaccat cagcaccgtc gatcacgcgg tggtcgaagg
    29461 agagagaaat cggcagcatc agacgcggca cgaactcttt accattccac accggctcca
    29521 tcgcggactt ggaaacgccg aggatagcca cttccggcgc gttcacaatc ggcgcgaagt
    29581 gggtagtacc caggccgccg atgctggaga tggtgaagca accgccctgc atttcgcccg
    29641 cagtcagctt accgtcacgc gctttcttag aaatagtcat cagctcgcga gacagctcga
    29701 tgatgccttt cttgttgacg tctttgaata ccggaacaac cagaccgttc ggggtatcca
    29761 ccgccacacc gatgttgatg tatttcttca gggtcagacg ctgaccgtct tccgacaacg
    29821 aactgttgaa gcgaggcatc tgctcaagag ctgcagcaac ggctttcatg atgaagacaa
    29881 ccggggtgat cttcacatcc agcttacgtt tcgccgcttc ttcgttctgc tgtttacgga
    29941 acgcttccag ctcggtgata tctgttttgt cgaagtgagt aacatgcggg atcatcaccc
    30001 agttacggct caggttcgca ccagaaattt tctggatacg gcccagttcc acttcttcga
    30061 tttcaccaaa cttgctgaag tccaccttcg gccacggcag catgcctggg ataccgccgc
    30121 ctgtcgccgc cggagctgct tctgcacgtt tgatagcttc tttcacgtaa gcctgaacgt
    30181 cttcgcgcag gatacgacct ttacggccag tgcccttcac tttcgccagg ttaacgccaa
    30241 actcgcgtgc cagacggcgg atcagcggag tcgcgtgaac gtaagcgtcg ttttcagcaa
    30301 attcagattt gccttcggct ttcgcagccg gagctgctgc cggagcttca gcttttgctg
    30361 ccggagccgg cgctgccgct tcctgtttcg ccggagccgc cgcaggcgct gcgccttcaa
    30421 cttcgaagat cataatcagc gagccagttt tcactttatc gccaacgttg actttcagtt
    30481 ccttcacgac gcctgcaaac ggagccggaa cttccataga agctttgtcg ccttctacgg
    30541 taatcagtga ctgttcagcg gcaactttgt cgcccacttt caccatcact tcggtcactt
    30601 caacttcgtc accgccgata tccggaacgt taacttcttt cacgccagcc gctggtgcag
    30661 gggccgctgc cggagccgct tcctgtttag ccgccggagc tgccgcgcct gcttcacccg
    30721 cgacttcgaa gaccataatc agcgagccgg tagacacttt gtcacccacg ttcactttga
    30781 tctctttcac ggtgccagca aacggagccg gaacttccat agaagcttta tcgccttcta
    30841 cggtgatcag cgactgttca gcttcaactt tatcgccaac tttcaccagg atttcggtca
    30901 cttcaacttc gtcgctgccg atatccggaa cgttaacgtc ttttgccgcc gcagccgcgg
    30961 gtgctgctgc cggagctgct tctttcttct cttctgcctg agcaggtgca gcgtctgctg
    31021 caccgtcggc ggaatcgaaa atcataatca gtgcgccggt ctgggtttta tcgccaacag
    31081 agactttgat ctctttaacg atacccgcct gcggagacgg aacttccata gaggctttgt
    31141 cgccttctac ggtgatcagc gactgttcgg cttcaacttt gtcgcccact ttgaccagga
    31201 tctcggtgat ttcaacttca tcagccccga tgtccggtac tttgatttcg atagccatta
    31261 ttcttttacc tcttacgcca gacgcgggtt aactttatct gcatcgatgt tgaatttggc
    31321 gattgcgtca gcaaccactt tcttatcgat ttcgccacgt ttagccagtt cgcccagcgc
    31381 cgcaaccacg acataagaag catcaacttc gaagtggtga cgcaggttct cacggctgtc
    31441 ggaacgaccg aagccatcag tacccagtac gcggtagtcg tcagccggta cgtaagtacg
    31501 gacctgctca gcgaacagtt tcatatagtc ggtagatgcc actgccggag cgtcgttcat
    31561 cacctgagcg atatacggaa cgcgcggagt ttccaacgga tgaagcatgt tccagcgttc
    31621 acaatcctga ccatcacgcg ccagctcggt gaaggaggtc acgctataaa cgtcagaacc
    31681 tacgccgtaa tctttcgcca ggatctctgc cgcttcacgg acgtgacgca ggatagaacc
    31741 ggagcccagc agctgaactt tacctttgct accttcaatg gtttcgagtt tgtagatacc
    31801 tttacggata ccttcctcag caccttccgg cattgccggc atgtggtagt tttcgttcag
    31861 cgtagtgatg tagtagtaaa cgttctcttg tttttcaccg tacatacgct ccagaccgtc
    31921 atgcatgatg acagcaactt cgtaagcgta agccgggtcg taagagatac agttcgggat
    31981 agtcagcgac tgaatgtggc tgtgaccatc ttcgtgctgc agaccttcac cgttcagggt
    32041 ggtacgaccg gaagtaccgc cgatcaggaa gccacgcgct tgctggtcgc cagccgccca
    32101 gcacagatcg ccgatacgct ggaagccgaa catcgagtaa tagatgtaga acggaatcat
    32161 cggcagattg ttggtgctgt aagaggtcgc cgctgccagc caggaacaac ctgcgcccag
    32221 ctcgttgatc ccttcctgca gaatctgacc tttctcgtct tctttatagt aagcaacctg
    32281 ctcgcggtcc tgcggggtgt actgctgacc gttcgggctg taaataccaa tctgacggaa
    32341 cagaccttcc ataccgaaag tacgcgcttc gtcggcgatg atcggtacca gacgatcttt
    32401 gatcgacttg ttcttcagca tcacgttcag agcacgaacg aaagcgatag tggtagagat
    32461 ctctttgctc tgctcttcca acagcgcgcc gaagtcttgc aggctcggca gctcaagctt
    32521 ctcggtgaag ttcggctgac ggcttggcag ataaccgtgc agtttctgac gctgagcgtg
    32581 cagataggta tgctcttcag aaccttccgg gaaggtgatg tacggcagtt tttcgatatc
    32641 tgcatcagac accggcacat tgaaacggtc gcggatgtga cgcacgccgt ccatgttcat
    32701 tttcttaacc tggtgcgcga tgtttttacc ttcagccgcg tcgcccatgc cgtaaccttt
    32761 aatggtatga gcaaggatta ctgtcgcttt gcctttggtt tcctgcgctt tcttgaatgc
    32821 agcgtagatt ttcttcggat cgtgaccacc acggttcagt gcccagatct gctcgtcagt
    32881 ccagtctgca accagtgctg cggtttcagg atatttaccg aagaagtgtt cacgaacgta
    32941 cgcaccatct ttcgatttga aggtctggta gtcgccgtca acggtttcgt tcatcagctg
    33001 gatcagttta ccgctggtat ctttacgcag cagttcatcc caacggctac cccacatcac
    33061 tttgatcacg ttccagccag caccttcgaa gatgccttcc agttcgttga tgatcttgcc
    33121 gttaccggtg accgggccgt caagacgctg caggttacag ttgataacga agaccaggtt
    33181 atccagtttt tcacgggtag cgatggtgat cgcacctttg gattccggtt cgtccatttc
    33241 accgtcgccg aggaacgcgt aaacggtctg tttagaggta tctttcaggc cacggtgttc
    33301 cagatatttc aggaatttag cctggtaaat agcaccaatc ggccccagac ccatagatac
    33361 ggtcgggaac tgccagaatt ccggcatcag tttcgggtgc ggataggaag agaggccatt
    33421 gccgtgaact tcctgacgga agttatccag ctgctcctga gtcagacgac cttccaggaa
    33481 agcacgagcg tacacgcccg gggagatgtg gccctggaag taaaccaggt cgccgccatc
    33541 ctgctcgttg cgtgcacgga agaagtggtt aaagcacaca tcataaatgg ttgcggaaga
    33601 ctggaaggac gccatgtggc cgcccagttc gagatctttt ttcgacgcac gcagcaccgt
    33661 catgatggcg ttccagcgaa tagctgaacg aatacggcgt tccagttcca gattacccgg
    33721 atactccggt tgttcttcaa cggggatggt gttgatgtag ttgctgatac ctgtgcctgc
    33781 ggctacgttt acaccgcctt tgcgggcttc agcaagcagt tggtcgatca gatactgagc
    33841 acgctcaaca ccttcttcac ggatgaccga ttcgatcgcc tggagccagt cgcgagtttc
    33901 gatcggatcc acgtcatttg ggaaacgttc tgacatgggt tattccttat ctatctaata
    33961 acgttgagtt ttctggaacc tgtcccattg aactctcgcc ggaaagctca ataagacagg
    34021 ttctacgttt agttgccgcg cttttatatg cgcttgattt acaacatctt ctggataatt
    34081 tttaccagaa aaatcactaa ttctttcgtt gctccagacg acgcagagaa cgctcacggc
    34141 ggctctcttc acgacttctg tcgagcaaaa tttcttcgat aaaggccaga tggcgatgcg
    34201 atgcttcgcg cgcttcttcc ggcttaccgg ccataatcgc ttcaaatatg cgggtgcggt
    34261 gactactcac cagcggcagc atctcgcgac gcgaatagag caattcgaag ttctggcgga
    34321 cattctgggc caacatcggc tccatacacc ttagcagatg aagcagaacc acattgtggg
    34381 ccgcttcggt gacggcaatc tgatactgga gtacggcgtt tgattccgcg tccagatcgc
    34441 cagactgctg cgccagctct atggcgtggt ggagttcacg gatgcgttcc ttgtcttcat
    34501 cggtactacg cagcgcggcg taataagcgg cgataccttc cagggcgtgt cgtgtttcga
    34561 gcaagtcata ctgtgactca ggatggtcgg agagcagctc caccagcgga tcgctgaagc
    34621 tttgccatag gctgctctgg acaaaagtgc cgccaccctg gcgacgaagc aacaagccct
    34681 tcgcttcgag acgttgaatc gcctcacgca aggagggacg ggagacgtca aactgttttg
    34741 ccagttcgcg ttccggtggg agtttttcgc ccgggcggag agtgccttcg aggatcaaaa
    34801 actccagttg ctgctcaatc acatcggaga gttttggttg gcggattttg ctgtaggcca
    34861 tgagttcctg tcttaagcca cttgccgaag tcaattggtc ttaccaattt catgtctgtg
    34921 acgctaaagt aacaaagtat tcaccttatg tccatacagg ttttgattga aatcatgaaa
    34981 ctgtgcacat tttaacaact tgacatatat aacgtttcaa agttgtaact atgcacaaat
    35041 gtagacttta
//
LOCUS       DAPGWB010000030        34531 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.030, whole genome shotgun sequence.
ACCESSION   DAPGWB010000030 DAPGWB010000000
VERSION     DAPGWB010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 34531)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34531)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34531
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.030"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            133..1455
                     /locus_tag="RHX79_001466"
     CDS             133..1455
                     /locus_tag="RHX79_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HDV2196660.1"
                     /translation="MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATA
                     AVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLL
                     TMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
                     LYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVS
                     LHESPVFEKVAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFST
                     AAAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLIILFALF
                     AFNPLLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVASI
                     LGASVAPYIAAWLQTNYGLGAVGLYLAAMAGLTLIALLLTHETRHQSL"
     gene            complement(1689..3749)
                     /locus_tag="RHX79_001467"
     CDS             complement(1689..3749)
                     /locus_tag="RHX79_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HDV2196661.1"
                     /translation="MSKAGKITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSA
                     ELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRV
                     EATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWS
                     FRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFG
                     LKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGG
                     VDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGD
                     SDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKS
                     VQPAGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQP
                     LKFGMAGGSIAANIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGEMNGDAE
                     LRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDEVRVNC
                     AAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSP
                     LYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILS
                     QMKK"
     gene            complement(3819..4586)
                     /gene="pdeH"
                     /locus_tag="RHX79_001468"
     CDS             complement(3819..4586)
                     /gene="pdeH"
                     /locus_tag="RHX79_001468"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417982.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase"
                     /protein_id="HDV2196662.1"
                     /translation="MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRL
                     MAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLA
                     SVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDF
                     GTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVE
                     TPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL"
     gene            4818..5747
                     /gene="kdgK"
                     /locus_tag="RHX79_001469"
     CDS             4818..5747
                     /gene="kdgK"
                     /locus_tag="RHX79_001469"
                     /EC_number="2.7.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417983.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxygluconokinase"
                     /protein_id="HDV2196663.1"
                     /translation="MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPA
                     ALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYY
                     WRNEAAAKFWLESEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANG
                     GKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTH
                     NAGVKEVVVKRGADSCLVSIAGEGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLT
                     GGSAENAAKRGHLTASTVIQYRGAIIPREAMPA"
     gene            complement(5843..7339)
                     /locus_tag="RHX79_001470"
     CDS             complement(5843..7339)
                     /locus_tag="RHX79_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDV2196664.1"
                     /translation="MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQW
                     QVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQ
                     QGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHAL
                     QSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAM
                     TLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLS
                     IMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRA
                     QCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARA
                     DTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILL
                     QPKGEPEFNMKALQAAWDQIMAPSTAAAATSVATDDVHPEVTDIPPAQ"
     gene            complement(7560..8846)
                     /gene="dctA"
                     /locus_tag="RHX79_001471"
     CDS             complement(7560..8846)
                     /gene="dctA"
                     /locus_tag="RHX79_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DctC"
                     /protein_id="HDV2196665.1"
                     /translation="MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKL
                     IKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPG
                     AGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLF
                     GFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQ
                     LGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRM
                     LDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLI
                     VLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNG
                     VATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS"
     gene            complement(9029..11017)
                     /gene="hmsP"
                     /locus_tag="RHX79_001472"
     CDS             complement(9029..11017)
                     /gene="hmsP"
                     /locus_tag="RHX79_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator HmsP"
                     /protein_id="HDV2196666.1"
                     /translation="MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTAT
                     QLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIP
                     ERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLV
                     TIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAQELVGHQLALPRLHQDDEIG
                     MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIIT
                     CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA
                     ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGK
                     NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ
                     QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL
                     MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF
                     GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQSLNLQMIAEGVE
                     TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK"
     gene            complement(11099..14573)
                     /gene="bcsC"
                     /locus_tag="RHX79_001473"
                     /pseudo
     CDS             complement(11099..14573)
                     /gene="bcsC"
                     /locus_tag="RHX79_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026226.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsC"
     gene            complement(14555..15661)
                     /gene="bcsZ"
                     /locus_tag="RHX79_001474"
     CDS             complement(14555..15661)
                     /gene="bcsZ"
                     /locus_tag="RHX79_001474"
                     /EC_number="3.2.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase"
                     /protein_id="HDV2196667.1"
                     /translation="MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVID
                     PSDARKITTSEGQSYGMFFALAANDRVAFDNILDWTQNNLAQGSLKERLPAWLWGKKE
                     NSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG
                     SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFS
                     PDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTE
                     KNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNY
                     VLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH"
     gene            complement(15668..18007)
                     /gene="bcsB"
                     /locus_tag="RHX79_001475"
     CDS             complement(15668..18007)
                     /gene="bcsB"
                     /locus_tag="RHX79_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
                     /protein_id="HDV2196668.1"
                     /translation="MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTE
                     QNPQVGQVMPGVQGADAPVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGM
                     RSDEVVTKAMLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPIN
                     PLFITDFNRVRLEFVGHYQDVCENPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPV
                     PFFDPRDNRTNTLPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRN
                     AIVFATNDKRPDFLRDHPAVKAPVIEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQ
                     GNILFRGESVVVNEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAI
                     NVSLNLPPDLYLMRSTGIDMDINYRYTMPPVKDSSRMDISLNNQFLQSFNLSSKQEAN
                     RLLLRIPVLQGLLDGKTDVSIPALKLGATNQLRFDFEYMNPMPGGSVDNCITFQPVQN
                     HVVIGDDSTIDFSKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMET
                     LLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDADIMIIGGIPDKLKDDKQIDLLVQAT
                     ESWVKTPMRQTPFPGIVPDESDRAAETQSTLTSSGAMAAVIGFQSPYNDQRSVIALLA
                     DSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLRVGDVYYVGHLPWFERLWYAL
                     ANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE"
     gene            complement(18018..20636)
                     /gene="bcsA"
                     /locus_tag="RHX79_001476"
     CDS             complement(18018..20636)
                     /gene="bcsA"
                     /locus_tag="RHX79_001476"
                     /EC_number="2.4.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417990.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-forming cellulose synthase catalytic
                     subunit"
                     /protein_id="HDV2196669.1"
                     /translation="MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILA
                     WIFIPLEHPRWQRIRAEHKNLYPHINASRPRPLDPVRYLIQTCWLLIGTSRKETPKPR
                     RRAFSGLQNIRGRYHQWMNELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSL
                     ILALICVTQPFNPLAQFIFLMLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRY
                     TSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVD
                     IFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQNVGVKYIART
                     THEHAKAGNINNALKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHF
                     FSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIA
                     VETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLD
                     NPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFV
                     LPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGG
                     LVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYGPPTEMLTVVVSMVWVFYNLIVL
                     GGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQIL
                     EGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQQHIDFVQCTFARADTWAL
                     WQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRVLTSLVSWVVSFIPRRP
                     ERSETAQPSDQALAQQ"
     gene            complement(20633..21385)
                     /gene="bcsQ"
                     /locus_tag="RHX79_001477"
     CDS             complement(20633..21385)
                     /gene="bcsQ"
                     /locus_tag="RHX79_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsQ"
                     /protein_id="HDV2196670.1"
                     /translation="MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLL
                     RLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRL
                     SDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQ
                     ALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEY
                     RSDALAAEEILTLANWCLLNYSGLKTPVGSAS"
     gene            complement(21397..21585)
                     /locus_tag="RHX79_001478"
     CDS             complement(21397..21585)
                     /locus_tag="RHX79_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhjR family protein"
                     /protein_id="HDV2196671.1"
                     /translation="MNNNEPDTLPDPAIGYIFQNDIVALKQAFSLPDIDYADISQREQ
                     LAAALKRWPLLAEFAQQK"
     gene            21858..23429
                     /gene="bcsE"
                     /locus_tag="RHX79_001479"
     CDS             21858..23429
                     /gene="bcsE"
                     /locus_tag="RHX79_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsE"
                     /protein_id="HDV2196672.1"
                     /translation="MRDIVDPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLAN
                     QTIASQAATAHVAVISMDSDPAKIFQLDDSQGPEKIKLFSMLNHEKGLYYLTRDLQCS
                     IDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLNHCSLLVINPGNNNDKQFSL
                     LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAE
                     IQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQI
                     EPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWNAPLSRCLTM
                     IESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGV
                     LVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLP
                     TGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRI
                     PEPMRLLDDAVERSS"
     gene            23426..23617
                     /gene="bcsF"
                     /locus_tag="RHX79_001480"
     CDS             23426..23617
                     /gene="bcsF"
                     /locus_tag="RHX79_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsF"
                     /protein_id="HDV2196673.1"
                     /translation="MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPR
                     YVKPAGTLRRTEKARATKK"
     gene            23614..25293
                     /gene="bcsG"
                     /locus_tag="RHX79_001481"
     CDS             23614..25293
                     /gene="bcsG"
                     /locus_tag="RHX79_001481"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HDV2196674.1"
                     /translation="MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHP
                     LLNLVFAAFLLMPIPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFS
                     TDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFS
                     LWPAGQPTTTVTTTGGNAAATVAATGGAPVVGDMPAQTAPPTTANLNAWLNNFYNAEA
                     KRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATS
                     YSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLK
                     EVRENGGMQTELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNT
                     LPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGD
                     RMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIDQPSSFLAISDLVVRVLDGK
                     IFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ"
     gene            complement(25380..25487)
                     /locus_tag="RHX79_001482"
     CDS             complement(25380..25487)
                     /locus_tag="RHX79_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HDV2196675.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            complement(25863..25970)
                     /locus_tag="RHX79_001483"
     CDS             complement(25863..25970)
                     /locus_tag="RHX79_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HDV2196676.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            complement(26346..26453)
                     /locus_tag="RHX79_001484"
     CDS             complement(26346..26453)
                     /locus_tag="RHX79_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HDV2196677.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            26929..28200
                     /locus_tag="RHX79_001485"
     CDS             26929..28200
                     /locus_tag="RHX79_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HDV2196678.1"
                     /translation="MQHNTLPKHDQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGL
                     KGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYF
                     LMIIHGIFIYSLAVVFDSASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLF
                     KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQ
                     VLNPMNIAYRKREADKVLATRLALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAF
                     EQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRII
                     DTKKINSRVLTLAICAFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKV
                     AQLEKLRGFKAWLILLYGILLCLSPLLKLIE"
     gene            complement(28230..29234)
                     /gene="dppF"
                     /locus_tag="RHX79_001486"
     CDS             complement(28230..29234)
                     /gene="dppF"
                     /locus_tag="RHX79_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP binding subunit
                     DppF"
                     /protein_id="HDV2196679.1"
                     /translation="MSTQEATSQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFN
                     LERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKLRRQKIQ
                     IVFQNPYGSLNPRKKVGQILEEPLLINTSFSKEQRREKALSMMAKVGLKTEHYDRYPH
                     MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFI
                     SHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRER
                     IKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR
                     "
     gene            complement(29231..30214)
                     /gene="dppD"
                     /locus_tag="RHX79_001487"
     CDS             complement(29231..30214)
                     /gene="dppD"
                     /locus_tag="RHX79_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HDV2196680.1"
                     /translation="MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGS
                     GKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSL
                     NPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVA
                     EAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPG
                     KYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL"
     gene            complement(30225..31127)
                     /gene="dppC"
                     /locus_tag="RHX79_001488"
     CDS             complement(30225..31127)
                     /gene="dppC"
                     /locus_tag="RHX79_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010426221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppC"
                     /protein_id="HDV2196681.1"
                     /translation="MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLF
                     IAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSL
                     LVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPS
                     IGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAP
                     LIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAI
                     LLTVLAFNLMGDGLRDALDPKLKQ"
     gene            complement(31137..32156)
                     /gene="dppB"
                     /locus_tag="RHX79_001489"
     CDS             complement(31137..32156)
                     /gene="dppB"
                     /locus_tag="RHX79_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppB"
                     /protein_id="HDV2196682.1"
                     /translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI
                     SPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL
                     GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW
                     NLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA
                     VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA
                     GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR
                     IRHKK"
     gene            complement(32307..33914)
                     /gene="dppA"
                     /locus_tag="RHX79_001490"
     CDS             complement(32307..33914)
                     /gene="dppA"
                     /locus_tag="RHX79_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter substrate-binding
                     protein DppA"
                     /protein_id="HDV2196683.1"
                     /translation="MRISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNP
                     QLFTSGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWH
                     DNKEFKPTRELNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDD
                     NTVQFVLTRPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQY
                     QKDSRIRYKAFDGYWGTKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARM
                     KQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVAA
                     KNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFSIDLWAMPVQRPYNPNARRM
                     AEMIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSC
                     AASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTV
                     FEPVRKEVKGYVVDPLGKHHFENVSIE"
BASE COUNT         7940 a         9594 c         8816 g         8181 t
ORIGIN      
        1 aaaaatcact ggcctaaaca ttatcccctt tttgcctggt ttttgaccat ttccgcgatt
       61 tgttacacat tgaaatatca cttttgctgt gcgtaatatg gctattcgtt agccaaaaaa
      121 taagaaaaga ttatgcaagc aacagccaca acactcgacc acgagcaaga atacacgccg
      181 atcaactcgc gtaataaagt ccttgtcgcc tctctcattg gcacggccat tgagttcttc
      241 gacttttaca tttacgccac tgcggccgtt attgtgtttc cgcatatctt cttcccgcag
      301 ggcgatccaa cggcagcaac gctacagtcg ctcgccacct tcgccatcgc cttcgtcgcg
      361 cgccccattg gctctgccgt ttttggtcat tttggcgatc gcgttgggcg taaagcgacg
      421 ctggtcgcct cgttgctaac gatggggatt tcgaccgtgg tgattggtct gctgccgggc
      481 tatgccacga ttggtatttt cgccccactg ctgctggcgc tggctcgatt tggtcagggt
      541 ctgggcttag gcggtgaatg gggcggcgcg gcgctgctgg cgactgaaaa cgccccaccg
      601 cgcaaacgtg cactgtatgg ctccttccca cagctgggcg caccgattgg cttcttcttt
      661 gccaacggca ctttcttgct gctttcctgg ctactgaccg atgagcagtt tatgagctgg
      721 ggctggcgtg tgccatttat cttctcggcg gtgctggtca ttatcggcct gtatgttcgc
      781 gtgtcgctgc atgagtcgcc ggtgtttgag aaagtcgcta aagcgaaaaa acaggtgaag
      841 atcccgctgg gtacgctgct gaccaaacat gttcgcgtaa ccgtactggg tacgttcatc
      901 atgctggcaa catatacgct gttttacatc atgacggtct actctatgac cttcagtacc
      961 gccgccgcgc cagttgggct tggcctgcca cgtaacgaag tgttgtggat gctgatgatg
     1021 gcagttattg gttttggcgt gatggtgcca gtcgccggat tactggctga tgcctttggt
     1081 cgccgtaaaa gcatggtaat tatcaccacg ctgatcatcc tgttcgcgct gttcgccttt
     1141 aacccgctgc tcggttctgg caacccgatt ctggtttttg ccttcctgct gctggggtta
     1201 agtctgatgg ggctgacctt cgggccgatg ggcgcgctgt taccagagct gttcccaaca
     1261 gaagtgcgtt acaccggagc atcgttctct tacaacgtag cgtcgattct cggggcttcc
     1321 gttgcgccgt atatcgcagc ctggttgcag actaactacg ggttaggtgc ggtggggtta
     1381 tatctggcgg cgatggctgg cttgacgtta atcgccctgc tgctgaccca tgagacgcga
     1441 catcagtcgt tgtaagtatc gtgtgggcag ccaccctcac cccagccctc tccctgaaag
     1501 ggagagggag aaaagcggag cgagatgtta tatcgcgaac ataacagccc tcccccagaa
     1561 agtgaacgga aaagcggtac tcgttgtttc aacacgcaca aaacagtccc ctcgcccctt
     1621 tggggagagg gttagggtga ggggaacacg ctgctcccga actcaccagc aaacacaatc
     1681 caacctcatc acttcttcat ctgcgacaat atcgtccgac actgattagc ctccccttcg
     1741 gaaggtgaga tcagtgccag taacgccgcc gccggtgtta ccagcgttgc cagtgccgca
     1801 gcaacagcac cacgggcaat caacggcccg gctttcaccc cagcctgcgg atttttaaac
     1861 gtcccacgca catacagcgg cgaacgcagt gtgataatcc gaatcccttt actctccgga
     1921 tcaatagtca aatccagctg ttccgaagca aaacttgccg tgccggtaac attaatcaac
     1981 gcgttctcag tatcgaaagc aaaaatctgc gggcgcgcca cgccgttggc aatattcaga
     2041 ttcgccgccg cgcagttcac ccgcacctca tcgtcaccaa atatcgcacc gacaatgtag
     2101 ttgccgacat tcagcccaac aatctccatc aggttgcggc tcaccagccc gtcattcatc
     2161 aacagtttca ggttgccgtt actgttgcct aaaagcgccg ccaccgagtt accgctaccg
     2221 cgtagttccg cgtcaccgtt catttccccc agcgtcttct gcatcagttc cacatcgggc
     2281 atcagttctt tcagtttcag tcgacgagcc tgaatatctg cccgcccctg catcggcttt
     2341 ttatcgcctt ccagatggat attcgccgca atgctgccgc ccgccatgcc aaatttcagc
     2401 ggttgcaggc gcaggtcagc atttttgagg atgatatgag tagaaagatc gctaatcggc
     2461 aggctactgc catgctcaat gcgccgccct ttgaagcgaa catcggcatc cataacgtcc
     2521 catttatcgg tttcgaagcg gtcataaggc agcactttgc ccgcaggctg aacgcttttt
     2581 tcgcccttct tctgttcaga ccgtttcgac ttttctgccc ctttcccgga gtcaacgcca
     2641 attaacggtc ccaggtccgc cagccgcaat tgccgcgact cgacatcacc ttccagtttt
     2701 ggtcgtggct ttccggtggt gtagaccaga gaaccgtgga tatcgctatc gccaattcgc
     2761 ccattaaaac cgcgataatc aaagaccgac gatttttcag tgtcgatttt cgctaccagc
     2821 cgaccatccg tttcaaacgg cggggtatcg ggcagcagaa cgcccgtcag ttcatagaga
     2881 tcacccagtg aatcgccaga aaatttaagc cgtaaatcga caccgcccat cttcattggg
     2941 tcattcacga cgccatcaaa agcaacacgg gtgttaccag agcggaaatc agcctgtacc
     3001 ggaaacggcg tcccttcgcc acgcagcgcc agcataccgc ctatttttcc cgtacccgtg
     3061 agcggttcac cgttataacg tccctgcgcc ttcaggccaa aaacgtaatc gcccaccttt
     3121 tctttatccg ctttaccttt cgatccagta acttcgctga acggcagcgg cttgcctaac
     3181 ggatcaacaa aaatctccag atccgctttg cttactttgt catcaatagc gatccgccct
     3241 tgatcgaaaa gaatattatc cagccgaaac gaccatgccg acggctttgc attcgcgtct
     3301 ttgttatcat cgttggcgag attaaacgtc cagttattgt tcttttcgga gaggcgaatc
     3361 aggcgcgcgt cgggcttttc gagcttgatc cacggcagcc agaccgtttt ggtcagcagc
     3421 gccagcgggg ccagcgttgc ctctacgcgt ggcaaatgca ccatcgtgac ttcgggaata
     3481 tccggtggat tgccaagaat gatgtcttcc gcgtgtacat ggggccacgg cacccagctg
     3541 cgccagccag tttcttgttt ttgccgctcc cacaccacgc ccagatcgcc acggatagcg
     3601 aacggacgat tcaactccgc agagactttc tggttgatgg tcggtttgag tcgattccag
     3661 tcaaaagttg caatcaaaat gatcgccacg acaatcaaca acaagaaagc cactgaaatc
     3721 gcagcggtta ttttgcctgc cttgctcatc gttcgcttcc tcatattctt cctgtgccag
     3781 tcctaaagat agtccagcca ggcggaaaat gaggcagctt atagcgccag aaccgccgta
     3841 ttcagcgttt ctatcggtgc cgggcgtgaa agaaaccagc cttgtgcggc gaatgcgggc
     3901 gagttctgaa catcacgcca ctcttccggc gtttctacgc cctcaacaat caccccgcga
     3961 caatagcgat tcattagatg taaaagctga gaaaagagtg tgcgtccttc cggcgactga
     4021 cgcagcatca caaacagttc tcgcgcgatt ttgatgtagt cataacgcac ttcacttagt
     4081 gcagagaaat ttgccatccc ggtaccaaaa tcatccagcc acagcgggcc aaattcacac
     4141 atcgaggcaa aggttgaatc tttcggcaga cggatatgct ccaccagttc gaaacgcagc
     4201 cagggaagac gctcaatctg gcgcaggatt tttggttgct gacgcagggc gatgagcgta
     4261 gggccatcaa tattgaccga tgccagcagg ccgtgctcta taaagaagtc ggctttttgc
     4321 gccagcaaat caatctgctc tttcacaacc tccatccgat ggctgacggt gatttcagta
     4381 aaatagcgat ccggcggcag gcgttgcgaa gggttcaagg gatgcgtgac caccgttaat
     4441 agctccacgg ccattaaccg tccgcatgtt tgatagatcg gctgccaggt gtaagcacgc
     4501 tcacactgca accaaaaacg ccgttcctgc aagctctcga tgcttgcttc agggttgctt
     4561 attcgctgga taacctgcct tatcatcaaa gatgtcctgt gtttaaaagt gatgctgccc
     4621 ggactcgaca aagattatcg gcgcgcaagg gcagaacttt accgcctggc cggggtaaat
     4681 ttcctcactc cacaacggaa tctttcagga atacgttctg gctcaaaaaa ataatggaac
     4741 actgttttaa tatggttgac cagcaaacca ccacagcgca aactaacgct aattttttac
     4801 agatcaggtt cacgactatg tccaaaaaga ttgccgtgat tggcgaatgc atgattgagc
     4861 tttccgagaa aggcgcggac gttaagcgcg gtttcggcgg cgataccctg aacacttccg
     4921 tctatatcgc ccgtcaggtc gatcctgcgg cattaaccgt tcattacgta acggcgctgg
     4981 gaacggacag ttttagccag caaatgctgg acgcctggca cggcgagaac gttgatactt
     5041 ccctgaccca acggatggaa aaccgtctgc cgggccttta ctacattgaa accgacagca
     5101 ccggcgagcg tacgttctac tactggcgga acgaagccgc cgccaaattc tggctggaga
     5161 gtgagcagtc tgcggcgatt tgcgaagagc tggcgaattt cgattatctc tacctgagcg
     5221 ggattagcct ggcgatctta agcccgacca gccgcgaaaa gctgctttcc ctgctgcgcg
     5281 aatgccgcgc caacggcgga aaagtgattt tcgacaataa ctatcgtccg cgcctgtggg
     5341 ccagcaaaga agagacacag caggtgtacc aacaaatgct ggaatgcacg gatatcgcct
     5401 tcctgacgct ggacgatgaa gacgcgctgt ggggtcaaca gccggtggaa gacgtcattg
     5461 cgcgcaccca taacgcgggc gtgaaagaag tggtggtgaa acgcggggcg gattcttgcc
     5521 tggtgtccat tgctggcgaa gggttagtgg atgttccggc ggtgaaactg ccgaaagaaa
     5581 aagtgatcga taccaccgca gctggcgact ctttcagcgc cggttatctg gcggtacgtt
     5641 tgacgggcgg cagtgcggaa aacgcggcga aacgcgggca cctgaccgca agtaccgtta
     5701 ttcagtatcg cggcgcgatt atcccgcgtg aggcgatgcc agcgtaaacg cagcatatgc
     5761 aaaaggctgg ataaagtgtt acccctctat ccagctcatc cataaatacc tgatggttgt
     5821 gctaactcat caccatcagg cattactgtg caggtggaat atccgtcact tcaggatgta
     5881 cgtcatccgt ggcgacagag gtggcggcag cagcagtcga tggggccatg atttgatccc
     5941 aggccgcctg caacgctttc atgttaaatt ccggctcgcc tttcggctgc agcagtatta
     6001 acgccatatc attcgacaac tgctgacgca gatcctgatt taacatctcc accgtcaggc
     6061 tgttaaggaa atcctgccgc agtttctgat actgctccgg cgcgatatcg acgacctgat
     6121 tttgcaacga acgcatccgc tgacccatca gaatatcggt atcagcccgc gcataggcgg
     6181 caaacagttt ctgcagctcc agtttctttt gcgccactaa cgcattgaac tcttcttccg
     6241 gcagaccttt atcgcgaacc ttcgccagtt cacgcgccac cagattaagg ttgctgttca
     6301 gcttgtcgtt tggtgattcg atgttgatgg cacactgcgc acgcagatac agcacacggc
     6361 agtcaaatcc aagaccgatg tctttgctgt tactggcgct taacgcttgc tgaacatgcc
     6421 agaacagcgc ctcgcgggcc aggtccgcac gccagtagcg cagcagtgcg gctgattcac
     6481 gaatcggctg ccacggcgta tcccacatga tagataaccg gtcctgacgc accgcgtcag
     6541 tcataatact caccgcttcc gcacgcagcg gagaaagcgt cggcaccgga gctggcgttt
     6601 cacgtttgcc tttcagttcg ccaaacgttt tgtttatttg gtcgacaacc gagcgcgcat
     6661 ccacgtttcc caccaccagt agcgtcattg catccggggt gtaccatttc tgatagaaat
     6721 ctttaatttt ttccgcttca acgggttgtt tcagcggatc ggcaggatcg tgacctaaca
     6781 aggttgaccc tttcagacga tagcgccacc agccctcttt agtatcggca ggccaggttg
     6841 ccaccatgtc ctgactttgc agcgcgtggt tgatggtttc tggtgtgatg gtcaatttgc
     6901 cagtggcatt tgccagataa gagagcgctt ctttcagcaa atcgttacgg ttattgggca
     6961 aactcagatt aaacagcgtg gtgtcataag agacaattac cggcggcatc gggcgtttag
     7021 ggtcgatccc ctgctgccac aatgaacgcg cctgtgctgc gtcaaggcca ccgctttgcg
     7081 ttagcgcaat acgagggatg gcgtgactgt aaccgctctg ttgtgtactt tcggcgagcg
     7141 aaccggtatt aaccagcagg cgaatttcaa cacgatcgct gggacgctgg ggggtggtca
     7201 gcacttgcca ctgtaaaccg ttggaaagcg tcccctgttg ccatgctgga tcaggctgga
     7261 gcgcatctgc ctgcacatag ccagcagtgg ccatcatcag caaaccgccc gctaaaagtc
     7321 gaatttttgt gccctgcatg tgaacccctg atcaactatc ctggtaataa aaaaactgcc
     7381 cgttgtcggt cagtctaaat gacgttaaaa acacttcgtg ttagaccgca agaacatgaa
     7441 aatgtcacgg aagaagtgaa ataaacctga actcacccag gtggtaagtt caggcacagg
     7501 ggtcaattat gcgcaaacac ccgcactcgg ggaagggagt gcgggcataa gtgatgagat
     7561 taagaggata attcgtgcgt tttgccatcc ggcgcacgat tattcagcac atcgtccagt
     7621 tttttgtggt ccagttcttt cacccactta gcaacgacaa tggtcgctac gccgttaccg
     7681 accaggttag tcagcgcacg agcttctgac ataaagcggt cgataccgag gatcagcgcc
     7741 agacccgcta ccggcaaatg gcccaccgca gagagcgtcg ccgccagcac gataaagcca
     7801 ctacccgtta cccctgccgc ccctttagaa gaaagcagca acacgattaa cagcgtgatt
     7861 tggtggacga tatccatctg actgttagtg gcctgggcga taaacaccgc cgccattgtc
     7921 aggtatatcg atgtgccatc aaggttaaac gagtagcctg tcgggatgac cagccccacc
     7981 accgatttgc ggcagccgag tttctccatc ttgtcgagca tacgcggcag cgccgactcg
     8041 gaagatgaag tccccagtac aatcagcagt tcttcacgga tgtagcggat aaatttgaag
     8101 atactgaaac cagtcgcttt agcgattgaa cccaatacca gcaccacaaa caggatacag
     8161 gtaatgtaga aacagataat cagctgcccc agttgcacca gtgtgccgac gccgtattta
     8221 ccgatggtaa acgccattgc cccgaacgca ccaataggcg ccagacgcat gatcatattg
     8281 atgatgccga agatgacctg cgagaaactt tcgatgacgt taaaaatcag ttggcctttg
     8341 ctgcccagac ggtggagcgc aaaaccaaac agtacggcaa acagcagcac ctgcagaatg
     8401 ttaccgctgg caaatgcgcc aatgacgctc gccgggatga catccataat gaaggcgaca
     8461 atgccctggt ctttcgcctg atcggcgtaa accgctaccg ctttcgcatc aagcgttgcc
     8521 ggatcgacgt tcattccggc accaggctgc acgacgttaa cgatgataag accaataatc
     8581 agcgcgatgg tactgacaat ttcaaagtaa agcagtgcga ctgcgccggt acgaccgacc
     8641 gccttcatgc tttccatgcc cgcaatgccc gttacgacgg tacaaaagat gacaggagcg
     8701 atgatcatct taatgagctt aacgaagccg tcgccaagcg gtttcatttg ctcgcctatt
     8761 tcaggataga aatggccaag gagaatacca atggctatcg ctgtcaggac ctgaaagtaa
     8821 aggcttttaa acagagaggt tttcataggg tgtcctttag taaaaccaca ggtcttgtaa
     8881 ggttatgggg tacctgcggc cttaaaataa cacccagaca acatcacaga aatgtacctg
     8941 gatcataatt gaaacaaaaa ggttaaaaag tttgagctgg ctcgcacaaa ccagcacttt
     9001 ttaaagtttt gtaatcagtt tggggtagct acttttcttc caggtaactc tcttcgaaga
     9061 tttcaatagg gagtgggcga gcaaaaagga agccctgggc aataccaacg cccgcttttg
     9121 ccagccagtc gcgttgtgct tcagtctcca cgccttcggc aatcatttgt aagttcaggc
     9181 tctgcgccag catgataatt gcagcaatca tgctgctatc ttccggcaag ccttcaacaa
     9241 acattttgtc gattttcagt acgtcgattg gcaacgattt catatgctgc agctgacgca
     9301 gccctgcgta gcccatgccg aaatcatcca gcgccacccg aactccggca ttgcgcagcg
     9361 gacggaggat tgccaccgca gcatgagggt cgtcaatacg tcggctttct gtcacttcca
     9421 gaatcagtgt tcccggctga atgcgatagc gggttaacag ttccagcata tccgccacca
     9481 tatttgggtg catcagttgc agcgcagaga ggtttaccga caagggcagc ataatgccgc
     9541 gctcttgcca ggctgcaagc aatcgacagg actcttccag cacccagtga ccgacggtaa
     9601 ccatcagccc acagcactca atgcgatcga ttaagccatc cggcaggtcc caactgccat
     9661 ccggttgctg gatacgcagt aacacttccg cactgaccag ttttccgctg gtcatctcga
     9721 cctgtggctg taaccaaata gcaaactgat gattttccag tgcattaagg atatcgctct
     9781 cttccgtcaa ccgcttctgg gcggcttcca tctgctgcgg atcaaagaac tgaatctgat
     9841 tcttgccttt atggcgagcg gtaaatgccg cagaaatagc gcgactgtaa agctgttcgg
     9901 cggtgagatc gccgtagaac atcgccacgc caatgctaca gtgcggacgg agttgaatac
     9961 gttcaatcgg caggcgctcg ctcatgatag tgagcacttg ctgacctaag gtgattgcgt
    10021 gccacggttc ctgtacaccg ttggcaatga cagcaaagtc ataaccgcta atctgcgcga
    10081 ggatcatacg tggcgacagt accgatttga gtttttccac cagcgtcagc agcagaattt
    10141 ctcgttgcgc ctctttcagc acgcccgcag tatcacgcag ggtttcacag gtgatgatca
    10201 tcagcgcggt ggtttgttta cgcgcgacaa cctgctccag catctccatc agcaaggctt
    10261 tgttcggcaa atccgacacc gggaagcgca tcgcattttc gttctgttct tcataatggc
    10321 gctgcagcaa ttgctggttg aggttgtaac tgcgcaccaa cataccgatt tcatcgtcct
    10381 gatgcagacg cggtaatgcc agttggtgac caacaagctc ctgggctggg atggcgttaa
    10441 gttcgcgagc aatattgcgt aacggatgca aaatcaggcg gttaatgcac cagctgatgg
    10501 cgacggtcag gataagcgac aaaagtaagt aaatggtcac taacgttgag agggtgctca
    10561 tcacgaactt atacatacgg aaggaatccg cctgtagtac cagataggca attggctgcg
    10621 ggtttgccgg acgttcgagc gagtaaacgc ccagcgagat ttgaaccggt agctcaaaca
    10681 ggcgagtaac cattaccggc accgggcgct ctggaataaa acttttacgc agcgcctgga
    10741 actggttagg cagcactaca tcggcacggc tgaccacgcc tgccggttta atgctggcaa
    10801 gaatagcttc cgcttcggga atatcgcctt tcaaaatagc tgaagataag ggttcgcgga
    10861 cagagcgagc aatgctttcc agttgcgtag ccgtgttata gcgattctgc tggaccagat
    10921 ggaacagcaa aacggtgcaa aaaataaaaa cgaacaccag gacaacggct gccaccattg
    10981 ccatctgctt gattgttaac gagcgactta cgcgcaaatt gtctcccccc ggaaatccca
    11041 gattgccgcc cgagtatacc cgatcgcagc ggcattaaga gaggcgctat ctgaaaactt
    11101 accagtcggc gtaaggtatc agcggctgcg gcggtaaatc catgtcaccc tgccatccgg
    11161 cggcggaata acgtacgtag agcaggaaat ggctgggtgc gtaatctttc gcctgctgga
    11221 tatcaattgc cgtgccaaca aaccagttgg aagtaacacg tcgttcaagt aatgcccgcg
    11281 ccgtgtagcc gaagccctga ctgctgccgc catcgttgga ttgccgcgca gcttcttcct
    11341 gccagtcggt cgggatcaga ttcatcagcg gataacgcgg catggttttg gtgcgtgaat
    11401 gcgaccacga gccagacgcc cccagctccc acgaccagtt ttccgtgcgc tcccgccaca
    11461 tcaccggtat ggcaaacgac aggtattcct gcggactgta gtaaccgccc tgaccgagtg
    11521 agtagccact cagatctttg tcgtaatgcc agatcatgtt gttcaggccg attgtgacgc
    11581 ggcgattgtt ctggttaatg accttatagt aatagcccgt catccagcgc acgcgccagt
    11641 tatcttcgac atttttaccg gttaactggt cgccactaag cgatgcccag acgccgtttg
    11701 cttcaccttt atcgtagctc agacttagcc ccacaccgtc ggcacgtacg ccaccccatt
    11761 ttttcccggt attgctcggg gagtcttttt gcccaccaaa ggccagcaaa gaactggaga
    11821 tgggccgacg gtgggcgtta acggtgtaac ccagcggccc gatatcatcg ctgtaactga
    11881 tgccgccgac cacatccacc acgttgaagc ccatcggcgt ggtaccgata tcccagctcc
    11941 agacgtcatt tcgccagccg accgccacgc tggcaccgga atccgactgg ctgcggttgc
    12001 cgctacagtc ctgtaatgta caggtgcccc agttgtcatc ccatttgcca tcggcattag
    12061 tggagaaact gccgacgttc atattgacga aatcactgcg aaagaacatc cgcccgtcag
    12121 aatacggcgc atccacctgc aacatggtag tgtgcgcttt cagatcggag taaccaccgg
    12181 tgccgctcga accccagtaa tcgtgctcaa gggtgacgtt aagatcctgc tggcgataga
    12241 ggtccgccgc atcgctgcgc acgccgcgtt tcagccagtc atctttctcg tcgttacggg
    12301 tcagtcgggt gaatgtgtcg ttatcctgcg gacgcgtcgt agtcacaccg gatgcgacca
    12361 tggcgtcttt gtaggtttcc agcgcctgct ttggatcgcc cgcctgcgct tcaaacttcg
    12421 caccgtcgcg cagcaccatc gcgctttcca tcgacggtgg ctgagatttt gcctgcggga
    12481 tcaacttatt aaacgtctgc tgcgccgctg cggtatctcc aagctgcgcc tgcgccagcg
    12541 ccacgcgccg ctgtgtgttc agcgaggcgt tatcggttag cgggcagttt cgccagctgg
    12601 ctacgtgccg ccgctgtgtc accggcagca atatccactt ccgtcagccc cagaatggca
    12661 tcggcgttag ttggctcccg cgtcaggaca ttctgatatg cagcgcgggc ggcggtgtaa
    12721 tcacgtcgct gctgcgccca gtcagccagc gtgaggtcaa tacgcgtgga aggtggttgc
    12781 tgacgcagca tcgcttccgc ttcagcttct ttgccgcttt ctcgcaggcg attagcggtt
    12841 tccagcacct gatcgctttg cagtcgatta accagctcct gaatattgct gttccactgc
    12901 gcgcgcggca ggctgttgat atgcgccagc gccgctctgt cctggtcatg accagagagg
    12961 tacagcccgt aagcgtaaac ctgctccggg tcgttcggct tctgctgcgc cagattgcgc
    13021 attaacgtat cggcctggct gcgttgtccg gcctgccaga gatcctgcga aagtcggtaa
    13081 gtaatccata cgctgccggg gtccagcgcc agtcgttgcc gctgaagtgc tgccgcctgc
    13141 gcccatttgc cctggttttc cagtgcctct gcctgctgtg ccagacggtc gttttgcagg
    13201 ctgcgttcga tatcatcaat gctacgccgc tgactggcag agagcgaggc gataaacgct
    13261 tcagcttttt ctggcgattg ctggcggtaa atatttgcca gcccgcgcac ggcgttagtg
    13321 ttgccgctgt ccatacgcaa ggtctgctga taataacgtt cggcggcggg ataatctttt
    13381 cgcgccatcg ccacatcgcc cagccccagc actgcataac tgtcggtgtt atcgacatta
    13441 cgcgcctgct ggaacaggcg ttctgcccgg tcaggattat tggctttcag cgcagcatcg
    13501 ccctgctgga tcgccagcca gtagcggttt actttcagca gactgttcca tttgtcgttg
    13561 ttgctgctgt gcgggtccag tgcgagggct ttttccagat tcgccactgc attggcgcga
    13621 tcgcctttct gagaatacgc ctggcccagc gcccccagag cttcactgtc tttcgggttc
    13681 gcccgcaccg cctgttgtag ttcgggaatg gctttacccg ccataccaga gtccaccgcc
    13741 gctaaacctt gcgcacgagc gcggaaagca ggatcggcca gctgtttttg ctgttctgcc
    13801 agttgcgatt gcgcagccgc cacgctatcg ccatcactaa agatcgagag atattttttc
    13861 agcgccgaca cactggcatc actgacgggc atgtctttaa tctgcccgta ccagatttta
    13921 gaggcccctt cgcgcccggc gttcgatttt gccatctgtt ccaggacggc aaaaccttcg
    13981 tcacggcgat cgctactaaa cagcaatagc gccagattgt tttgcaggcc cgtattgccc
    14041 ggtgcatccg cattgatgcg ttttaactga ttaatcgctt cgccacggcg agccggaatt
    14101 ttcgccaccg tactccagta ctcgacagca atgtcacctt ccggcggcgc accgttgaac
    14161 agtttgttgt aactcgccac agcttcttct gcatgaccgg tcgtcgcctg caatcgtgcc
    14221 tgttgcagtg cctgacgacc atccggcgtg gaaagtagca tcgtagtccg cgacgattta
    14281 tacgcatttg aactcggcgc taactgcgac agccgatcga gctgtttttg cgcgccatca
    14341 atatcgccct gacgtaacaa agaacggaaa cgggcggcaa cgacgtccgg gttattcgga
    14401 tcaataagtt ccagccgata taacgactgt tgcaccagat cttcacgatg ggtcgcttcg
    14461 cctaaccgaa cttgctccag caactgttgc tgagcggttg gtgctgcctc gaccatcggc
    14521 atgacggcca gaccgaggga aagcgtgaat atgtttagtg tgaatttgcg cattcctggc
    14581 cccagtcagg taataactca ccttttgtcg agaagcggaa acggtgttga tcccagcctt
    14641 gtccaaacag ggtcagcaca tagttgtaat aggcatcgct gccgggaaag ttatcggcca
    14701 cgcgctggcg ctgaacggcc tgcgcatcgc ggttttgtaa aaagggcagc atggcggcag
    14761 aaaaaccgac cggtccttta ccctgcgctt tccccgtagc cacatccact ttttccggcg
    14821 gataaccgtt tttctcagtg aatgtcgcca tcggtttaaa ccggttgagc atccgcgctt
    14881 tttgcggatc gctgtcaggc atcatgccta cccacatgta aacgcggata gcgtcgtagc
    14941 tgctgatcaa tgttttttcg gcttttagct gccagccttt gtctttctca tagcgcaccc
    15001 agtctggcga aaaacctttc ggggcggttt ccagcaataa acgttgattg gtttcgcgca
    15061 gcgtggtcca cggcgcgcca aagcgggtga aatactgcgc cagcgtcggc ggcaggtagc
    15121 tggggttaaa acgccagctg ttatcctcag caaaacccac tttgcccggt aacaacatgg
    15181 aacccagccc aggcaccgtc accacttcct cccgcgcgat acgttttagc aacgcgctgc
    15241 cgatgtcggt ataacgctgc tctttccaca aacgccccgc ctccagcaac gaccaggcca
    15301 tccagacatc accatcggag gccgaattgc tgtccagcac ttcccactta ctgttctctt
    15361 tcttgcccca cagccaggcg ggcaaacgtt cttttaaaga gccctgagcg agattgttct
    15421 gcgtccagtc gagaatatta tcgaaagcta cacggtcgtt agccgccagg gcaaagaaca
    15481 taccgtaact ttgcccttcg gaggtggtga ttttgcgcgc gtcgctgggg tcgatgacgc
    15541 gcccttcctg actgatgtaa tcctttttaa actgctccca ggcaggccag gtacaggctg
    15601 cctgaacact aaaggcagcc aacagcagca tcgtcacgat tccactacgc aacacattca
    15661 tcttcaatta ctcgttatcc gggttaagac gacgacgact aataattcgc agcagacgcc
    15721 acagtaccca tgccagcaat atcacactga tagccgccag caccgccagc agaatcggat
    15781 ggtttgccag cgcataccac aagcgctcga accacggcag atgacctacg taataaacgt
    15841 cgccaacacg taggctgttg ataccggact cgcggatcac cgcgaccgaa ccgaacatgg
    15901 tggcgcgttt gccgctatcg ttcaccgcat cgttaagcat ttcataaccg cgtgggctat
    15961 ctgccagcag cgcaatcacg ctgcgctggt cgttatacgg cgactggaag ccaatcaccg
    16021 ccgccatcgc accggaagag gtcagcgttg actgggtttc tgccgcgcga tcgctctcgt
    16081 ccggcacaat gccggggaac ggggtctggc gcatcggtgt tttcacccag ctttcggtcg
    16141 cctgcaccaa taggtcgatc tgcttatcgt ctttcagttt gtccgggata ccaccgatga
    16201 tcatgatgtc ggcatctttg ccctgaatgg tgctgccatc atcggtcacc gtcagattaa
    16261 tcgccgggaa gcccgtctgt gcgccgataa aaccaacagt attcagcaac gtttccatct
    16321 gtgcttcgtt aggcgctttc ggcatcacgg tgatggtttg cgacagatcc gccatccggc
    16381 tgaatgggaa gcccgcgtta gcaaaggcgc gtagatccgg catcgggatg aagtggtaat
    16441 acttcgagaa gtcgatggtg gagtcgtcac caatcaccac atgattctgc accggctgga
    16501 aggtaataca gttatccacc gaaccgcccg gcatcgggtt catatactca aagtcgaagc
    16561 gcagctggtt ggtcgcgccc agtttcagcg ccggaataga gacatctgtt ttgccatcca
    16621 gcaaaccttg taataccgga atccgcagca gcaggcggtt cgcctcctgt ttgctgctca
    16681 ggttgaagga ttgcaggaac tggttattca ggctgatatc catccgcgaa ctgtctttca
    16741 ccggcggcat ggtgtagcgg taattaatat ccatatcaat gccggtactg cgcatcaggt
    16801 agagatccgg cggcaggttt agcgaaacgt taatcgctgc tggctcaaga ccgctggatt
    16861 gtaactgttc ttcataggtt ttcagttcgc caaatgtgac cggacgatcg gtacgtaccc
    16921 agttcggcgc atcgtacggc ttacgcggta gcagcggttt cacttcattc actaccacgc
    16981 tttcaccacg gaacagaatg ttaccctgag cgataccttt cgctgcctgc aacaggtctt
    17041 tgtcgtcacg accaaacacc accagcagtt tgacgtaagg attctgcgga tggttaatca
    17101 tctcaatcac cggggctttt accgccggat gatcgcgcag gaagtccggc cgtttgtcgt
    17161 tggttgcaaa gacaatggca ttacgatccg gcagttggtt atagagcacc gggaagttct
    17221 gcccacgcca gccagaacgc gaaccaaacc acgaggcgac aatggcagag gcttgttgca
    17281 gcccaacatc cggcgcaccc gcaaagacca tcggcaaggt gttggtgcgg ttatcacgcg
    17341 gatcaaagaa tggcaccggg aagtgtgaca ggtcattctt cacattcagg gtctgatagg
    17401 tcagatccag tccactgctc cgcccaacat ccagccaaag cgtggtgctg gccgggtttt
    17461 cgcacacgtc ctgataatgg ccgacaaact ccagccgcac acggttgaag tcggtaataa
    17521 acagtgggtt aatgggcatt tgcgccagcg tttttttacc caactgttct ttggtcactg
    17581 gcagcacgcc catcagctca tcattgagat aaacctttaa ctgcgactgg acaggcagta
    17641 acgatggcga tggcgtgtat tcgaggttga gcatcgcctt cgtcaccact tcatcgctgc
    17701 gcataccaaa ctcaatgctg ccgttcgggt taatgccacg tagcaccatg ctgcccggcg
    17761 gcggcgcaat ttgcgcaaag gtcagcttca catcacgcga aggaccgttc tgcgccacga
    17821 ctggcgcatc agcgccctgc acgcccggca tcacttgccc cacctgcgga ttttgttccg
    17881 tctgggcggc tacagctggc tcagcattga tcagtggttg cgttgctggc gtcgcctgcg
    17941 tcatgaaaga ggggaacgca ctcatcccca tagccactgc acaaatccag aatagttttc
    18001 ttttcatcgc gttatcatca ttgttgagcc aaagcctgat ccgatggttg tgccgtttcg
    18061 ctccgctccg ggcggcgcgg aataaacgat acaacccagg aaaccagaga agtcagcaca
    18121 cggaatatgc ccttcaccga agaaggcgca aactccgcca gatggcggta gccacggaag
    18181 ccgagcttca gaatatccag cagactttcc agcggcttat cttccgggta gctgtcctgc
    18241 cagagcgccc atgtatccgc acgggcaaac gtacactgca caaaatcgat atgttgctgg
    18301 gtggtgagcg gcattaattt cagcccaact tcattaccca tcacgcgcgc cacctgggtc
    18361 gggaagacgt attcctgctg accgcgttta agcaacagat tcactttctg cccttccaga
    18421 atctgcgcct gaccgttgat cttgatcccc aaaccaccgt cggagaaatc ctgaacggta
    18481 cacgagaaga ggtgaccatc ttcgcgggca attgccgcgg gcatcgtcat ctccacgcgg
    18541 tgcgatcggc gtacctgttt gctttctacc gataccgcaa ctgcgccgcc aagaacaatc
    18601 aggttgtaga acacccacac catactgacg accacggtga gcatctcggt tggcgggcca
    18661 tagaagtagc gccagatgcc taccgcaacg cccaccaggt tgagtagaac aaggaagatg
    18721 tagggccgcg agatcaccca gtcgacgtac tcttcttcca ccagtccacc tttggcggtg
    18781 acgttaaatt tgcctttgtg cgggttaatc agcgccacca gcgtcggtgg tgcgatatac
    18841 cacgccagca ccgtttcgta gatttcactc cagaaagagt ggcgatattt gccctggatc
    18901 ttcgagttgg tcaggctggc atggatcata tgcggcagca cgaatagggc gatcatcaac
    18961 gctggcgcat agatgatgta ggcatgaagc agcaggaacg ccagcggcgc agtcaggaag
    19021 atcagccgtg gaatgcccga caagaagtgg aacatggcgt tgacgtagca cagccgctga
    19081 gcaaacttca gtcctttacc ggtgagcggg ttatcgagac ggaagatttg caccatcccg
    19141 cgcgcccagc gaatacgctg accgatatgc gccgacagac tttcggtcgc cagccccgcc
    19201 gcctgcggaa tacgcatata cgcggaggta tatccacgac ggtgcaaacg cagagaagta
    19261 tgcgcatctt cagtcacagt ttcgacagca atgccgccaa tttcatccag cggcttacgg
    19321 cgaatcaccg cacaggaacc gcagaagaaa gtggcgtccc acatatcgtt gccatcctgc
    19381 accagaccat agaacagcgt gccttcgttc ggtgttttac gaaaacgccc caggttgcgt
    19441 tcaaacgggt ctggcgagaa gaagtggtgt ggagtctgca tcatcgccag ctgtttctct
    19501 ttcaggaacc agcccatggt catttgcagg aacgatcgcg ttggtacgtg gtcgcagtcg
    19561 aaaatcgaca cgaactcgcc tttggcatat ttcagcgcat tgttgatgtt gcccgctttc
    19621 gcatgttcat gagtggtacg ggcgatatat ttcaccccca cgttttgcgc aaactggcga
    19681 aactcttccc taccgccgtc atcgaggatc cagatgttca gcttgtcttt cggccagtcg
    19741 atacccagcg aggcgtaaat agtatttttc accacgttga gatcttcgtt gtaagtcggg
    19801 acaaagatat ccaccgacgg ccacagcgac atatctttcg gcaatggcac cggctgacga
    19861 ttcagcggcc atactacctg gaagtagccg agcaccagca caatccacgc gtacgtttca
    19921 gcgaagagca gaataagccc gcacaccagg ctgaccggat cgtcccagtt cagcgtagag
    19981 gtgtaacgcc accagatata acggcaagaa acggtcagcg acagcacaat caacattagc
    20041 gccgagaagc gccccggcat ccgccgtacg atcagcgcta caccccacag cagcatcagg
    20101 aagataaact gcgccagcgg gttaaacggt tgagtaacgc agattaacgc cagaatcagc
    20161 gagaaggtga cgatgatacc gaggatcaac cgccgcgccc cggcactcaa atgaccgagc
    20221 tcttttttct catcaagatg ctgtgtttta tggctaacgc gctcaggcag ctcgttcatc
    20281 cattgatggt aacgtccacg aatattctgc agacctgaaa atgcccgcct gcgcggtttc
    20341 ggcgtttctt tgcgcgatgt accgatcagt aaccagcatg tttgaatgag ataacggacc
    20401 gggtccagcg gacgcggacg cgaggcgttg atatgcggat acaggttttt atgttctgcg
    20461 cgaatacgct gccagcgcgg gtgctccagc ggaataaaaa tccaggccag gatcatccag
    20521 aaacagccga gcgtcgcgct gaaagccgac gcaccgtgac gacgataatc gcgataacgc
    20581 ccgataagcc gcgcgttgac cggcgggata agcaaccacc gggtcaggat actcatgatg
    20641 cactcccgac tggcgttttc agcccggagt agttcaacag gcaccagttc gccagcgtca
    20701 gtatctcttc agccgccagc gcatcactgc gatattcacc tactggttgc ttagccgcca
    20761 ggcattcagc catcgcttca tcacgatgaa tgagcatcgg cagtaatcgg cgctggcttt
    20821 gcaaccaaag ctggtaaata tcgtcctgaa cctgactgcc aatacggaag tcattaatca
    20881 aaatatgtgc gccatccggc agcgcttgct gatgcagtcg gatatggcag ttggcatcca
    20941 cattgacgat tgccagcgag tgatcgcaca aactcagcag ctggtgggtt atctgcgagg
    21001 catcacgcgg taagtcgatt aaaatccact ggtaacgccc gctggctttt agttgctgta
    21061 agccggagca aatatcgctc agccgggttt gccagtgctg tggattttct tgttcttcaa
    21121 tggataactg accaaaaggc agcaaatcga gctgcgaggt gtagcgcaac ccagcgtcac
    21181 gccagtcctg gccatccagc atcgctctgg cccagccctg acggtgggta aaatcaacat
    21241 taaatgacag gcgcaacaag ttgtccgggc aggcatcgac caccagaaca ttttctccca
    21301 acatttgtaa tgaccaggct aatgcggcgg tgatggttgt tgtccccacg cctccccgca
    21361 ccccctgcaa tcccagtacg gccattcacc aatcccctac ttttgttgcg caaactctgc
    21421 cagcaacggc cagcgtttta atgccgcggc caactgttcg cgttgggaaa tatcggcata
    21481 atcaatatca ggcagtgaaa atgcctgctt taacgccaca atatcattct ggaagatata
    21541 gcctatcgcg ggatcaggca gagtatctgg ttcattgtta ttcattttgc ttgatcccta
    21601 tgaaataacc gtaccgttca tgagacaatt ctaaccgtga gcatttcgcc ggtttattgt
    21661 ttacggcgag acgggaattt gctcactttt tgactttccg ttacgcaaca gaaaaagtta
    21721 aaaacgaaaa gactaaaatc acacgtcttg tgaccttcta aattgattca catgctaaat
    21781 ctgataagtt ttaatttcaa tggtaggttt atttcttagc tttcgctagt aaactgataa
    21841 tcagacaaaa tggtgacatg agggacattg tggaccctgt attctctatc ggtatctcat
    21901 cattatggga tgagctgcga catatgccag caggcggcgt ctggtggttt aacgtcgatc
    21961 gccatgaaga tgctatcagt ctggcgaatc aaacaattgc ctcccaggct gcaaccgcac
    22021 acgtcgcggt cattagcatg gacagcgatc cggcgaaaat ctttcaatta gatgattctc
    22081 aagggccgga aaaaataaaa ttattttcaa tgctaaatca tgaaaaaggt ctatactatt
    22141 tgacccgtga tttgcagtgt tctattgatc cccataatta cctttttatt cttgtttgcg
    22201 caaataacgc atggcaaaac attcctgccg agcggcttcg ctcatggttg gataaaatga
    22261 ataaatggag caggttaaac cattgttcgc ttttggtaat taatcccgga aataataacg
    22321 ataaacaatt ttcattgttg cttgaggaat accgttcact ttttggtctt gccagtttgc
    22381 gttttcaggg tgaccaacat ttgctggata ttgccttctg gtgcaacgaa aaaggggtca
    22441 gcgcccgtca gcagcttagc gttcagcaac aaaatggtat ctggacatta gttcaaagcg
    22501 aagaggcgga gatccaacca cgcagcgacg aaaaacgcat tctgagtaat gttgctgtac
    22561 tggaaggtgc gccgccgcta tcggaacact ggcaactgtt caacaataac gaagtcctgt
    22621 tcaatgaagc ccgtaccgct caggcggcga cggtggtctt ttctttacag caaaatgcgc
    22681 aaatcgagcc actggcccgc agcattcata ccctgcgtcg ccagcgcggt agtgcgatga
    22741 aaatcctcgt gcgggaaaat accgctagcc tgcgcgccac cgatgaacgt ttgttattgg
    22801 cctgcggtgc aaatatggtt attccgtgga atgcgccact ctcccgttgt ctgacgatga
    22861 tcgaaagcgt gcaagggcag aagtttagtc gctatgtgcc ggaagatatc actaccttgc
    22921 tgtcaatgac ccagccgctc aaactgcgtg gtttccagaa gtgggatgtg ttctgtaatg
    22981 ccgtcaacaa catgatgaat aaccctctct tgcctgccca cggtaaaggc gttctggttg
    23041 ccctacgtcc ggtaccgggt atccgcgttg aacaagccct gacgctgtgt cgccctaacc
    23101 gtaccggcga tatcatgacc attggcggta atcggctggt gctgtttctc tcattctgtc
    23161 ggattaacga tctggatacc gcgttgaatc atattttccc attgcctact ggcgacattt
    23221 tctcaaaccg tatggtctgg tttgaagatg atcaaatcag tgccgagctg gtgcagatgc
    23281 gcttgcttgc cccagaacaa tggggcatgc cgctgccttt aacgcaaagt tctaaaccgg
    23341 tcatcaatgc cgagcacgat ggtcgccact ggcgacgaat accagaaccc atgcgactgt
    23401 tagatgatgc tgtggagcgc tcatcatgat gaccatcagc gatatcattg aaattattgt
    23461 cgtttgcgca ctgatatttt tcccgctggg ctatctggcg cggcactctt tgcgacgcat
    23521 tcgcgacacc ttacgtttgt tctttgctaa acctcgttat gttaaaccgg ccgggacgtt
    23581 acgccgcacg gaaaaagcca gggcaaccaa aaaatgactc aatttacaca aaataccgcc
    23641 atgccttctt ccctctggca atactggcgc ggcctttccg gctggaactt ctattttctg
    23701 gttaagttcg gcctgttgtg ggcgggatat cttaacttcc atccgctcct caatttggtg
    23761 tttgccgcgt ttctgctgat gcccattccg cgctacagcc tgcatcgctt gcgccactgg
    23821 attgccctgc cgatcggctt tgctttgttc tggcatgaca cctggttgcc tggcccggaa
    23881 agcataatga gccagggttc gcaggtggcg gggttcagta ccgattattt aatcgacctt
    23941 gtcacacgct ttattaactg gcagatgatt ggggccattt ttgttttatt agtggcctgg
    24001 ttattcctgt cacaatggat tcgcattacc gtttttgtgg ttgccatact gctatggctg
    24061 aacgtactta ccctggcggg accaagtttc tccttgtggc cagccggaca accgacgacc
    24121 actgtaacaa cgacgggtgg taacgcagcg gcaaccgttg cggcgacggg tggcgcaccg
    24181 gtagtgggtg atatgcccgc acaaactgca ccgccaacaa cggcgaacct taacgcctgg
    24241 ctgaataatt tctataacgc ggaggcgaaa cgtaaatcga ccttcccgtc ttcgctgccc
    24301 gctgatgctc agccatttga actactggtg attaacatct gttcgctttc ctggtcggat
    24361 atagaagccg ccgggttgat gtcgcatcca ctgtggtcgc atttcgatat tgagttcaag
    24421 aactttaact ccgccacctc ctacagtggc ccggcggcga tccgtttact gcgcgccagc
    24481 tgcgggcaga cttcgcacac taatctgtat caaccggcaa ataacgactg ctatctgttt
    24541 gataaccttt cgaaactggg ctttacccag cacctgatga tggggcataa cggccagttc
    24601 ggcggttttt tgaaagaagt tcgcgaaaat ggcggcatgc agactgaatt gatggatcaa
    24661 acaaatctgc cggttatttt gctgggcttt gatggttcgc cggtttatga cgataccgcc
    24721 gtgcttaacc gctggctgga cgttaccgaa aaagataaaa atagccgtag tgccacgttc
    24781 tacaacacgc ttccactgca tgacggcaac cattatccgg gggtcagcaa aacagcggat
    24841 tacaaagcgc gggcgcagaa attctttgat gaactggacg ccttctttac tgaactggag
    24901 aaatcgggtc gtaaagtgat ggtggtcgtg gtgccggaac acggcggcgc gctgaagggc
    24961 gacagaatgc aggtatctgg cctacgtgat atccctagcc cgtctatcac agacgtcccc
    25021 gttggggtga aattcttcgg catgaaggca ccacatcagg gggcaccgat tgtcattgac
    25081 caaccgagca gcttcctggc tatctccgat ctggtggttc gcgttcttga tggcaagatt
    25141 ttcaccgaag acaatgttga ctggaaaaaa ctcaccagtg ggttgccaca aacagcaccg
    25201 gtctccgaga actcaaatgc agtagttatt caataccagg ataaaccgta cgttcgcctg
    25261 aacggcggcg actgggtgcc ttacccgcag taagcacgaa aaaggccgca gagtttcacc
    25321 cctgcggcct ggtccgggcg caaattgcca ttacggcagc ctgacgcccg catgacacgt
    25381 tacttccgct tgttcagcca gttcacgatc atactggcaa gaatgccagc aatgaccgga
    25441 gccgctaaat catgccagaa ggccatgccc agttctgcga gcgtcatata gccgcctgtg
    25501 ttgtaatgac aacgtttcgc ggctattctt gagttgttca ggttcaagaa tggcccccgt
    25561 gatgttgtca ggtgcatacc tgcaacgtgc gggggttttc tctctccagc aaccaatgcc
    25621 accagggata aagcccccgc aacattgcgc ctcaccggaa cccttccggc ttgccgctga
    25681 ttctacgact gtttttctgt tccggaatcc gtcacgtctt cactctgtgc tgcgcattcc
    25741 gcagaatatt atccgcttgc aaccgttgca tttttcttac gaaaaaggcc gcagagtttc
    25801 acccctgcgg cctgatccgg gcgcaaattg ccattacggc agcctgacgc ccgcatggca
    25861 cgttacttcc gcttgttcag ccagttcacg atcatactgg caagaatacc agcaatgacc
    25921 ggagccgcta aatcatgcca gaaggccatg cccagttctg cgagcgtcat atagccgcct
    25981 gtattgtaat gacaacgttt cgcggctatt cttgtattgt ttggatgcaa gaatggcccc
    26041 cgtggtgttg tcaggtgcat acctgcaacg tgcgggggtt ttctctctcc agcaaccaat
    26101 gccaccaggg attaagcccc cgcaacattg cgcctcaccg gaatccttcc ggcttgacgc
    26161 tgattctacg actgtttttc tgttccggaa tccgtctcat cttcactctg tgctgcgcat
    26221 tccgcagaat attatccgct tgcaaccgtt gcatttttct tacgaaaaag gccgcagagt
    26281 ttcactcctg cggcctggtc cgggcgcaaa ttgccattac ggcagcctga cgcccacatg
    26341 acacgctact tccgcttgtt cagccagttc acgatcatac tggcaagaat gccagcaatg
    26401 accggagccg ctaaatcatg ccagaaggcc atgcccagct ctgcgagcgt catatagccg
    26461 cctgtgttgt aatgacaacg tttcgcggct attcttgagt ggtctaggtt caagattagc
    26521 ccccgttatg ttgtcaggta catacctgca acgtgcgggg gttttctctc tccagcaacc
    26581 aatgccacca gggataaagc ccccgcaaca ttgcgcctca ccggaaccct ttcggcttgc
    26641 cgctgattct acgattgctt tttaccgtca gcacccggca atcttcctca ttgcgtgatg
    26701 cattccagct taatttcttt atttgcaata gttgcagttc atatccgagc tgactccaga
    26761 ctggtagtga aatgcgcaat tttgtagaat tgcgcctcct cgcgacctcc ccagtgaatc
    26821 tgttgcctca ttttttacat actgcgtatt cgacttctcc acctgttgcg caagagaaac
    26881 tgggtttatt catttttgcg aggccgactt ctttctggac aggactttat gcagcacaac
    26941 acactaccga aacacgatca gaaattgcct tttacacgct acgacttcgg ctgggtttta
    27001 ttatgcatag gcatggcgat tggtgccgga accgtgctga tgccagtaca aattggcttg
    27061 aagggaattt gggtatttat taccgcagcg atcattgctt atcctgccac ctgggtagtg
    27121 caggacattt atttaaaaac cctttctgaa agcgattcct gtaatgacta caccgatatt
    27181 atcagtcatt acctggggaa gaactgggga attttcctcg gggttatcta ctttttgatg
    27241 attatccacg ggatttttat ctactctctc gccgtggttt tcgacagcgc ctcgtacctg
    27301 aaaaccttcg gtttaaccga tgccgatctt tcacaatctc tactttataa agtcgctatt
    27361 ttcgccgtac tggtggcgat tgcgtctggt ggtgaacgat tactgtttaa gatttccggg
    27421 ccaatggtgg tggtcaaagt agggattatt gtcgtgttcg gttttgcgat gatcccgcac
    27481 tggaatttcg ccaatataac cgccttcccg caagcctccg tctttttccg cgatgtcttg
    27541 cttaccattc cattttgctt cttttctgca gtatttattc aggtacttaa cccaatgaat
    27601 attgcctatc gtaaacggga agcagataaa gtactggcaa cccggctcgc gctgcgtacc
    27661 caccgaatta gttatatcac gctcatcgcg gtgatcctgt tttttgcctt ttcgtttacc
    27721 ttctcaatta gccacgaaga agccgtttct gcctttgaac aaaatatctc ggcactggca
    27781 ctggccgcgc aggtgatccc tggacatatc attcatatca cctctacggt gctgaatatc
    27841 tttgccgtac tgaccgcatt ctttggcatt tatctcggtt tccacgaggc tattaaaggc
    27901 attattctca atctgttaag ccgaattatt gataccaaga aaattaactc acgcgtgctg
    27961 actctggcga tctgcgcttt tatcgtcatt acgttgacga tttgggtttc gtttcgtgta
    28021 tcggtgctgg tgttctttca gttgggaagc ccgttatatg gcattgtgtc gtgcctcatt
    28081 ccgtttttcc tgatctataa agtcgcacaa ctggaaaaac ttcgcggatt taaagcctgg
    28141 ctgattctgc tgtacggcat tttgctatgc ttgtcgccac tgttgaagct gattgagtaa
    28201 accggagcgc atggccccgg ttttgtgagt taacgctgcg gattttcatc ctgatcaaca
    28261 gcaaaacaag ctaccagttg accgccgtag tcttttagct gcggctgcaa ctgggtgcag
    28321 gggccgaagc gccgacgaca gcgggcgttg aaggcgcaac ccggcggtgg attcagtggg
    28381 cttggtagtt caccgctgag cttgatgcgc tcgcggcgat cgtccgggtt caggcgcggc
    28441 gtcgcggaaa gtagcgcctg agtgtacgga tggcgcgggt tattgaagat ttggtctttc
    28501 gttcccttct ccacgcagcg gcccaggtac atcaccatca cttcatcagc aatgtgctcc
    28561 accaccgaca ggtcgtggga gataaagaca taagaaagcc ccaactcctg ctgcaaatcc
    28621 atcatcagat tcagcacctg cgcacgcact gagacgtcca gcgcagaaac cggttcatcg
    28681 gcaatcacca cgtccgggtc gagcatcaga ccacgggcaa tagcgatacg ctgacgttgt
    28741 ccgccggaga acatatgcgg atagcggtca tagtgctcgg ttttcaggcc gactttcgcc
    28801 atcatcgaca gggctttttc ccgacgctgt tctttgctga agctggtgtt aataagcagc
    28861 ggctcttcga gaatttgccc aactttttta cgcggattca gcgaaccgta agggttctgg
    28921 aagacaatct ggattttctg ccgacgcagc ttctgcgcct gcggatcgtg cttgagcaga
    28981 tcctgcccct ggtaatacag ctcaccaccg gtgggcgttt cgatcatcgt cagcaaccga
    29041 ccgagggtcg atttaccgca gccagattcg cccactactg ccagcgtttt gccacgttca
    29101 aggttaaacg aaacgccgtc cagcgccttc accagacgtt ccggcgcgaa catgcctttc
    29161 ttcaccggat aatgtttttt caggtcgata gcctgcaaca gcggttgttg cgaggtggcc
    29221 tcttgcgtac tcatagtgtc ggcctcccgg catcatcaag tgggtaatgg catttggact
    29281 gacgcccatc agcgagcata ttcagcgccg gttcttcagc gcgacatctg tcagtggcat
    29341 aggggcagcg cgggttaagc aggcagccgt tcgggcggtc gtacttaccg ggaacgacac
    29401 ctggcaacga cgccagacgt tctttgtcct gagcaaattc tggcagcgca cgcagcaatg
    29461 cctgagtata cgggtgacgc ggcgcatgga agatggcgtg cgcatcgccc gtttccacca
    29521 cctgaccggc atacatcacg atgattttat gtgccgcttc cgccaccagc gccaggtcat
    29581 gggtaattaa caccagcgcc atgttctctt tctgctgtag ctccagcagt agttcaatga
    29641 tttgcgcctg aatggtcacg tccagcgcag tggttggttc atcggcaatc agcagttttg
    29701 gccgacaggc aatcgccatg gcgatcatca cacgctgact cataccgcca gaaagctgat
    29761 gcgggtaaac atccagacgc gatgccggat cgggaatacc gacctgattc agcaggtcaa
    29821 tcgctcgctg acggcgggta cttttgttgc cgccctgatg caccttaatc gcttccataa
    29881 tctggaaacc cacggtgtag cacgggttaa ggctggtcat cgggtcctgg aagatcatcg
    29941 ccacttcggc acccaccagg ttgcggcgct ctttttctga gatacgctgc aaatcctggc
    30001 cgttaaactc cagtttttct gccattacgc ggcccggata atcaatcagc cccataatcg
    30061 ccagtgaact gaccgactta ccggagccgg actcacccac aatcccgacc acttcgccct
    30121 gttttacgct gtagctgatg cggtctacgg cgcggaacgg cgcgctttcg tcgccgaaat
    30181 gcaccgataa tttatctaca tttaataacg ccatctcgaa cctcttactg cttcagtttg
    30241 ggatcgagcg cgtcacgcag accgtcaccc atcaggttaa atgccagcac cgtcagcagg
    30301 atcgccagac ccgggaaggt cacgacccac caggcgcttt gcgcgaactg caacacgtcg
    30361 gagagcatgg tgccccactc aggcgttggc ggctgtgccc ccatgccgag gaaaccaaga
    30421 gcagccatat cgagaatggc gttagagaaa ccgagcgacg cctgaacaat cagcggcgca
    30481 aggcagttcg ggaagatgtt aataaacatc tgacgcatcg ccccggcacc cgccacgcga
    30541 gacgcggtga cgtaatcgcg gttaacttcc accagcacgg cggcgcgggt taagcgcaca
    30601 tagtgcggca aggcaacgaa ggtcagtgcc agcgcggcgt taccaatcga cgggccgaaa
    30661 attgccacca gcaccagcgc cagcagcaga cttggcagcg ccagcatgat atcgaccacg
    30721 cgcataatga tgttatcgac caggccgcca aagtaaccgg cgatcaggcc gagaataacg
    30781 cccataatca gcgataacac aactaccaga cagccaacca gcagcgacag gcgcgcaccg
    30841 tacatcaggc gcgacagcac atcacggcct acgtcatcgg tgcccagcaa gtgcgccatg
    30901 ctgccgcctt cctgccaggc tggcggggcg agcagtgcat cgcggaactg ttccgccggg
    30961 ttatagggtg caatccagtt ggcaaagatc gcgatgaaca gcacgatgac gacgtaaacc
    31021 agcccgacga ccgcgccttt gttgcgttta aaatagtgcc agaactcctg taacggggtc
    31081 atcggcaccg gtgcgctaat cactttattt tcagtaacct gtgacatgat gtccccttac
    31141 ttcttatgac gaatacgcgg gttcaccacg ccgtacagca gatcgaccag caagttgacg
    31201 aggataatca tcgtcgccac cagcaatacg ccgccctgca ctaccggata gtcgcggcgt
    31261 tgcagtgcgt caatcaacca gcgtcccaga ccgggccacg agaagatggt ttcggtcaga
    31321 atcgcccccg ccagcaatgt tcccacctgc aggccgataa cggtcaccac cggcagcatc
    31381 gcgttacgca gcgcatggac gataatcacc cgcatgcggg ttagcccttt ggcgcgcgcg
    31441 gtgcggatgt aatcctcgcc cagcacttcc agcatcgagg agcgtgtcat acgcacaatg
    31501 accgccagcg gaatagtacc cagcacaatg gcaggcaaga tcatatgggc gacggcatcg
    31561 ataaagttgc cgtcttcacc ccagatggcg gtgtcgatta gcataaaacc ggttaacgga
    31621 ttggagtcat cgaggaacac catatcgctc acgcgaccgg agacgggcgt caggttccag
    31681 tgcaccgaaa ccagcatgat cagcatcatg ccccaccaga agatcggcat cgagtagccg
    31741 gtcagcgcca ggccaaccgc tgtgtgatcg aaaatggaac cgcgtttaac cgcagccagc
    31801 acaccaaccg gaataccgac tgccgtagca aaaatcatcg cgcagacgcc aagttccagc
    31861 gtggcctgaa agcgcggcac gaactcttcc catactggaa ttcggctttt cattgaaatg
    31921 cctagatcgc cgtgcattac gccccaaatg taatggagat actgctgcca catcggttta
    31981 tctaagccga gttcagccag cagctgcgcg tgacgctcag gggagatccc acgttcgcct
    32041 gccatgatca tcaccggatc gcccgggatc atgtggacaa aggcaaatgt gagaagggta
    32101 ataccgataa acgtggggat gacgagtccc aaacgtcgga gaataaactg caacataacc
    32161 cggattctct gtagtgaccc gcagcctgga actgcgtgtc tgtattgctc acaaatcaat
    32221 tcccgcccag gtcgggcagg gaatgaagta ttgctgccgg atggcgctgc acgcagaggc
    32281 acagcaccac cgggtatggc ttttaattat tcgatagaga cgttttcgaa gtgatgtttg
    32341 cctaatggat caaccacata gcctttaact tctttgcgta ccggttcaaa cacggtggag
    32401 tgagcgatga tcagtgccgg agcctgatcg tgcatcacca cctgcgcttg cttgtacagt
    32461 tcaacgcgtt tgttatggtc gtcggtagca cgcgccggtt gaatcagatc ttcaaacggt
    32521 ttgtagcacc attttgagta gttggagcct tgttcagagg cggcgcagct gaacagagtg
    32581 gcgaagaagt tatccggatc cccgttatcg ccagtccagc ccatcattac cgtctggtgc
    32641 tcgccatctt tcgcacgctt gaggtactca ccccattcgt aggtgacaat tttggcctgc
    32701 acgccgactt tcgcccagtc tgcctgaatc atctccgcca tgcggcgagc gttcgggtta
    32761 tacggacgtt gtaccggcat cgcccacagg tcgatggaga aacctttttc cagacccgct
    32821 tctttcagca aggctttcgc tttttcagga tcgtaggtgt agtcctgaac gtcgtcgtta
    32881 tagccccaca tggttggcgg gatcaggttt ttcgctgcca cgcccgcgcc ctgataaacc
    32941 gctttgatga tcgcgtcttt gttcaccgcg taggtcagag cctggcgaac tttcacatca
    33001 tcgagtggtt ttttctgcac gttatacgag agataaccga cgttcagccc cggcatttcc
    33061 atcaggttga tggatttatc ctgcttcatg cgagcgatat ctgccgggtt cgggtacggc
    33121 atcacctggc attcattctt ctgcaatttc gcgtaacgca cggaagcatc aggggtaata
    33181 gagaaaacca gcgtatcgat ctgcggtttg gtgccccagt agccatcaaa cgctttgtag
    33241 cggatacggg aatctttttg gtactgctgt aactggaacg gaccggtgcc gattgggttg
    33301 aggtccagtt tttccggtgt accggctttc atcatcgcat cagcatattc ttttgacaga
    33361 atagaggcga agtccattgc cagatcagcg aggaacggcg cttccgggcg agtcagtacg
    33421 aactgaactg tgttgtcgtc cacctttttc acttcactga tcagctccgg caagcccatg
    33481 ccttcgaagt attcgtagct gccgccagag actttatggt acgggttttg cgcgtttttc
    33541 tgacggtcga acgagaacac cacgtcatcg gcgttcagtt cacgcgtcgg tttgaattct
    33601 ttattgtcgt gccacttcac acctttacgc agatggaagg tataggtttt accgtcttcg
    33661 ctgacttccc acttttcagc gaggcccggg atcacttcag tggtgccgat tttaaattca
    33721 accaggcggt tataaagcgg tacggaagag gcgtcatagg tggtgccgga ggtaaacagc
    33781 tgcgggttaa acccttccgg agatccttct gagcaataaa ccagagtttt agcctgaaca
    33841 cttgctgcga cggtcatagc caccaggctg agaccaagct tcagcatccc tgactttttc
    33901 aaggaaatac gcattattct gctccaattg tgatgtttgt tgttttaacc ctttgcagtg
    33961 ggttgtcgct gcctgacctt ttttgttttt tgcccggtcg ggtcaacgtt atgaggtggg
    34021 gatgccgtac taattaacat cagtgtaaca gtgcggatcc tccataaaat gcccctcgtg
    34081 acctacaatc tgtcaacaga atgtgaaaac gtcaatacag ccaaccggga tttacaccaa
    34141 cggtgagaat ccacaaacaa agattaaaaa aacttcaaac agctatttgc agcagagaaa
    34201 tttgtgctac tccaacatga ccagaacaat cagcttaata tttagcaaca tttggtgatt
    34261 aagttttatg catttaatga aaaaaatctg aggaaaaggt ggatatctga gcgattaata
    34321 ccatgaacgc taaaacgcac agcggaaaat gccagggtca gccataagta acgcaaaaaa
    34381 agatttaagc aaatataaaa aaagacaatg gtttctgtca caaatccgtt aatggatagt
    34441 gagatatggg gcgcaaattt ggcagggaaa tgtgtggtgt gtaggtcgaa taaggcggtc
    34501 gcgccgcatc cgacaataag tgcggtgccg t
//
LOCUS       DAPGWB010000031        34344 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.031, whole genome shotgun sequence.
ACCESSION   DAPGWB010000031 DAPGWB010000000
VERSION     DAPGWB010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 34344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34344
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.031"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..218)
                     /locus_tag="RHX79_001491"
     CDS             complement(<1..218)
                     /locus_tag="RHX79_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196684.1"
                     /translation="MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVT
                     SGHPVNPLLGAKVLPGETDIALPGPLPF"
     gene            complement(378..590)
                     /gene="rpmE"
                     /locus_tag="RHX79_001492"
     CDS             complement(378..590)
                     /gene="rpmE"
                     /locus_tag="RHX79_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDV2196685.1"
                     /translation="MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFF
                     TGKQRDVATGGRVDRFNKRFNIPGSK"
     gene            793..2991
                     /gene="priA"
                     /locus_tag="RHX79_001493"
     CDS             793..2991
                     /gene="priA"
                     /locus_tag="RHX79_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709739.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDV2196686.1"
                     /translation="MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIG
                     VVVSVSDVSELPLNELKAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI
                     LLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF
                     NDAALQALRKKGLCDLASETPEFSDWQTNYAVSGERLRLNTEQATAVGAIHSAADTFS
                     AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL
                     HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR
                     YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVL
                     DLKGQKVQAGLAPALITRMRQHLQANNQVILFLNRRGFAPALLCHDCGWIAECPRCDH
                     YYTLHQAQQHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPDVPIS
                     RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA
                     DFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE
                     RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADDKLWVLGPVPALAPK
                     RGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRKVKWVLDVDPIEG"
     gene            3147..4172
                     /gene="cytR"
                     /locus_tag="RHX79_001494"
     CDS             3147..4172
                     /gene="cytR"
                     /locus_tag="RHX79_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CytR"
                     /protein_id="HDV2196687.1"
                     /translation="MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRV
                     EKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLI
                     GDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
                     LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVD
                     PQYIARGDFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLS
                     IIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIR
                     GSTRALP"
     gene            4264..5223
                     /gene="ftsN"
                     /locus_tag="RHX79_001495"
     CDS             4264..5223
                     /gene="ftsN"
                     /locus_tag="RHX79_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HDV2196688.1"
                     /translation="MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVL
                     VTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEP
                     SAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQ
                     QLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDLLQTPAHTT
                     AQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSK
                     ITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG"
     gene            5316..5846
                     /gene="hslV"
                     /locus_tag="RHX79_001496"
     CDS             5316..5846
                     /gene="hslV"
                     /locus_tag="RHX79_001496"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDV2196689.1"
                     /translation="MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVI
                     AGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADET
                     ASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDIC
                     IYTNHFHTIEELSYKA"
     gene            5856..7187
                     /gene="hslU"
                     /locus_tag="RHX79_001497"
     CDS             5856..7187
                     /gene="hslU"
                     /locus_tag="RHX79_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HDV2196690.1"
                     /translation="MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEEL
                     RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFR
                     KKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKI
                     KDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG
                     VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQA
                     LTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGA
                     RRLHTVLERLMEEISYDASDLSGQTIIIDADYVSKHLDALVADEDLSRFIL"
     gene            7254..8180
                     /gene="menA"
                     /locus_tag="RHX79_001498"
     CDS             7254..8180
                     /gene="menA"
                     /locus_tag="RHX79_001498"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HDV2196691.1"
                     /translation="MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPL
                     VALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIIT
                     VVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLV
                     FFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVV
                     RLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDP
                     VAMRPMLERTVKGALLTNLLFVLGIFLSQWAA"
     gene            8273..8758
                     /gene="rraA"
                     /locus_tag="RHX79_001499"
     CDS             8273..8758
                     /gene="rraA"
                     /locus_tag="RHX79_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001392924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HDV2196692.1"
                     /translation="MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFED
                     NGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDL
                     EELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI
                     E"
     gene            complement(8843..9088)
                     /gene="zapB"
                     /locus_tag="RHX79_001500"
     CDS             complement(8843..9088)
                     /gene="zapB"
                     /locus_tag="RHX79_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring assembly protein ZapB"
                     /protein_id="HDV2196693.1"
                     /translation="MTMSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQ
                     NAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV"
     gene            9514..10359
                     /gene="glpF"
                     /locus_tag="RHX79_001501"
     CDS             9514..10359
                     /gene="glpF"
                     /locus_tag="RHX79_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol uptake facilitator protein GlpF"
                     /protein_id="HDV2196694.1"
                     /translation="MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEI
                     SVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAA
                     LVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILM
                     GLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAG
                     WGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLPCDICVVEEKETTTPSE
                     QKASL"
     gene            10382..11890
                     /gene="glpK"
                     /locus_tag="RHX79_001502"
     CDS             10382..11890
                     /gene="glpK"
                     /locus_tag="RHX79_001502"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HDV2196695.1"
                     /translation="MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPG
                     WVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAI
                     VWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGE
                     LLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEV
                     RRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNT
                     GEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFA
                     TKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDV
                     LEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGL
                     AVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE"
     gene            12026..13036
                     /gene="glpX"
                     /locus_tag="RHX79_001503"
     CDS             12026..13036
                     /gene="glpX"
                     /locus_tag="RHX79_001503"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HDV2196696.1"
                     /translation="MRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIML
                     NQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALA
                     VLAVGDKGCFLNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVT
                     ILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSA
                     AVIRALDGDMNGRLLARHDVKGDNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSD
                     NVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVH
                     IL"
     gene            13133..13879
                     /gene="fpr"
                     /locus_tag="RHX79_001504"
     CDS             13133..13879
                     /gene="fpr"
                     /locus_tag="RHX79_001504"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP(+) reductase"
                     /protein_id="HDV2196697.1"
                     /translation="MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEID
                     GERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDE
                     VPDCETLWMLATGTAIGPYLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEK
                     RYEGKLRIQTVVSRETAAGSLTGRIPALIESGELESAIGLPMNKETSHVMLCGNPQMV
                     RDTQQLLKETRQMTKHLRRRPGHMTAEHYW"
     gene            complement(13884..14312)
                     /gene="uspD"
                     /locus_tag="RHX79_001505"
     CDS             complement(13884..14312)
                     /gene="uspD"
                     /locus_tag="RHX79_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspD"
                     /protein_id="HDV2196698.1"
                     /translation="MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLS
                     ELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKE
                     QCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK"
     gene            complement(14339..14638)
                     /locus_tag="RHX79_001506"
     CDS             complement(14339..14638)
                     /locus_tag="RHX79_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 domain-containing protein"
                     /protein_id="HDV2196699.1"
                     /translation="MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFM
                     TKLKELAAAASSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA"
     gene            complement(14850..15290)
                     /locus_tag="RHX79_001507"
     CDS             complement(14850..15290)
                     /locus_tag="RHX79_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDV2196700.1"
                     /translation="MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDI
                     QTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVG
                     RFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN"
     gene            15391..15990
                     /locus_tag="RHX79_001508"
     CDS             15391..15990
                     /locus_tag="RHX79_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiQ family protein"
                     /protein_id="HDV2196701.1"
                     /translation="MKPGCTLFFLLCSALTVTTTAHAQTPDTATTAPYLLAGAPTFDL
                     SISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIK
                     SIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY
                     TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK"
     gene            16098..16865
                     /gene="tpiA"
                     /locus_tag="RHX79_001509"
     CDS             16098..16865
                     /gene="tpiA"
                     /locus_tag="RHX79_001509"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDV2196702.1"
                     /translation="MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPE
                     MYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYH
                     KESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFE
                     GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNA
                     AELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA"
     gene            complement(16920..17675)
                     /gene="cdh"
                     /locus_tag="RHX79_001510"
     CDS             complement(16920..17675)
                     /gene="cdh"
                     /locus_tag="RHX79_001510"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709723.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HDV2196703.1"
                     /translation="MKKAGLLFLVMIVIAVVASGIGYWKLTGEESDTLRKIVLEECLP
                     NQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFW
                     LAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDKNLAN
                     ISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQS
                     DNSFVLLATQRNLLTLNRASAEEIQDHECEILR"
     gene            complement(17782..18771)
                     /gene="sbp"
                     /locus_tag="RHX79_001511"
     CDS             complement(17782..18771)
                     /gene="sbp"
                     /locus_tag="RHX79_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter
                     substrate-binding protein Sbp"
                     /protein_id="HDV2196704.1"
                     /translation="MNKWGVGLTFLLAATNVMAKDIQLLNVSYDPTRELYEQYNKAFS
                     AHWKQQTGDNVVIRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWI
                     KRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAW
                     GYALHHNNNDQAKAQDFVRALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLA
                     ANELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAK
                     NYYRPRDAEVAKKYENAFPKLKLFTIDEEFGGWTKAQKEHFANGGTFDQISKR"
     gene            complement(19090..20052)
                     /gene="pfkA"
                     /locus_tag="RHX79_001512"
     CDS             complement(19090..20052)
                     /gene="pfkA"
                     /locus_tag="RHX79_001512"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014072359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HDV2196705.1"
                     /translation="MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLG
                     LYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIG
                     GDGSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSS
                     HQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAI
                     VAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLL
                     LAGYGGRCVGIQNEQLVHHDIIDAIENMKRPFKGDWLDCAKKLY"
     gene            complement(20233..21135)
                     /gene="fieF"
                     /locus_tag="RHX79_001513"
     CDS             complement(20233..21135)
                     /gene="fieF"
                     /locus_tag="RHX79_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312867.1"
                     /note="FieF, a metal efflux transporter, is a member of
                     the CDF (cation diffusion facilitator) family of
                     transporters; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter FieF"
                     /protein_id="HDV2196706.1"
                     /translation="MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALV
                     DSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGI
                     QHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMM
                     NGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEI
                     IDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFP
                     GSDVIIHQDPCSVVPREGKRSMLS"
     gene            complement(21284..21784)
                     /gene="cpxP"
                     /locus_tag="RHX79_001514"
     CDS             complement(21284..21784)
                     /gene="cpxP"
                     /locus_tag="RHX79_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-envelope stress modulator CpxP"
                     /protein_id="HDV2196707.1"
                     /translation="MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSH
                     MFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKM
                     ANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSLKLLSS
                     SNSRSQ"
     gene            21934..22632
                     /gene="cpxR"
                     /locus_tag="RHX79_001515"
     CDS             21934..22632
                     /gene="cpxR"
                     /locus_tag="RHX79_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response regulator transcription
                     factor CpxR"
                     /protein_id="HDV2196708.1"
                     /translation="MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDS
                     IDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPF
                     NDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGT
                     EFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWF
                     KTLRGRGYLMVSAS"
     gene            22629..24002
                     /gene="cpxA"
                     /locus_tag="RHX79_001516"
     CDS             22629..24002
                     /gene="cpxA"
                     /locus_tag="RHX79_001516"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress sensor histidine kinase CpxA"
                     /protein_id="HDV2196709.1"
                     /translation="MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQR
                     QGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEM
                     QIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLL
                     FDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEF
                     LAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELER
                     IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTV
                     NFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVS
                     PEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW
                     LPLYKRS"
     gene            complement(24108..24782)
                     /gene="yiiM"
                     /locus_tag="RHX79_001517"
     CDS             complement(24108..24782)
                     /gene="yiiM"
                     /locus_tag="RHX79_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418346.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein"
                     /protein_id="HDV2196710.1"
                     /translation="MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQ
                     AEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGD
                     IFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPL
                     ELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFS
                     RRLWGK"
     gene            complement(24931..25914)
                     /gene="kdgT"
                     /locus_tag="RHX79_001518"
     CDS             complement(24931..25914)
                     /gene="kdgT"
                     /locus_tag="RHX79_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate transporter"
                     /protein_id="HDV2196711.1"
                     /translation="MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMI
                     TGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVE
                     VGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGT
                     AGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTV
                     IAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEM
                     VPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK"
     gene            complement(26174..26794)
                     /gene="sodA"
                     /locus_tag="RHX79_001519"
     CDS             complement(26174..26794)
                     /gene="sodA"
                     /locus_tag="RHX79_001519"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010345169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HDV2196712.1"
                     /translation="MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALE
                     SLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA
                     IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGAS
                     GFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK"
     gene            27079..28113
                     /gene="rhaT"
                     /locus_tag="RHX79_001520"
     CDS             27079..28113
                     /gene="rhaT"
                     /locus_tag="RHX79_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose/proton symporter RhaT"
                     /protein_id="HDV2196713.1"
                     /translation="MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIV
                     SWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMG
                     IGIAIGITLIVGTLMTPIINGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKER
                     KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYV
                     IIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKPLITHNVLLSALGGLMWYLQFFFY
                     AWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVA
                     ANIVGIGMAN"
     gene            complement(28110..28976)
                     /gene="rhaR"
                     /locus_tag="RHX79_001521"
     CDS             complement(28110..28976)
                     /gene="rhaR"
                     /locus_tag="RHX79_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418342.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaR"
                     /protein_id="HDV2196714.1"
                     /translation="MAEVATVAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDF
                     CELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKL
                     NLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVIGQLEHESSQHVPFANEMAELLFGQ
                     LVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ
                     FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT
                     PSQWRHLNSQKD"
     gene            complement(29032..29868)
                     /gene="rhaS"
                     /locus_tag="RHX79_001522"
     CDS             complement(29032..29868)
                     /gene="rhaS"
                     /locus_tag="RHX79_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaS"
                     /protein_id="HDV2196715.1"
                     /translation="MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHG
                     TGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLL
                     PQELDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKS
                     SLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQR
                     YLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGF
                     LQ"
     gene            30156..31625
                     /gene="rhaB"
                     /locus_tag="RHX79_001523"
     CDS             30156..31625
                     /gene="rhaB"
                     /locus_tag="RHX79_001523"
                     /EC_number="2.7.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HDV2196716.1"
                     /translation="MTFRNCVAVDLGASSGRVMLARYQRECRSLTLREIHRFKNGLHS
                     QNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAY
                     RDSRSNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLM
                     PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIG
                     HWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTA
                     LAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIAATQALPACRFIINP
                     NDDRFINPEAMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQLRGE
                     DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDF
                     RQVVSTTANLTTFTPNPDSEIAHYVAQIHSTRQTKELCA"
     gene            31622..32881
                     /gene="rhaA"
                     /locus_tag="RHX79_001524"
     CDS             31622..32881
                     /gene="rhaA"
                     /locus_tag="RHX79_001524"
                     /EC_number="5.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose isomerase"
                     /protein_id="HDV2196717.1"
                     /translation="MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDD
                     VSGFENPEGSLTGGIQATGNYPGKARNASELRTDLEQAMRLIPGPKRLNLHAIYLESD
                     TPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWID
                     HCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNP
                     AHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAA
                     MLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINR
                     IAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYC
                     QRHDTPTGSEWLESVRAYEKAILSQRG"
     gene            33123..33947
                     /gene="rhaD"
                     /locus_tag="RHX79_001525"
     CDS             33123..33947
                     /gene="rhaD"
                     /locus_tag="RHX79_001525"
                     /EC_number="4.1.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulose-1-phosphate aldolase"
                     /protein_id="HDV2196718.1"
                     /translation="MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAP
                     YKDNFHAQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGVVKVDSDGAGY
                     HILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAV
                     FTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSG
                     STLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL"
     gene            33957..34271
                     /gene="rhaM"
                     /locus_tag="RHX79_001526"
     CDS             33957..34271
                     /gene="rhaM"
                     /locus_tag="RHX79_001526"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HDV2196719.1"
                     /translation="MIRKAFVMQVNPDAHEEYQRRHNPIWPELAAVLKSHGAHNYAIY
                     LDKARNLLFATVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFY
                     LP"
BASE COUNT         8396 a         8956 c         8928 g         8064 t
ORIGIN      
        1 atgaacggca gcgggccggg cagggcgatg tcggtttcac cgggaaggac ctttgcaccc
       61 agcagcggat tgaccggatg gccggacgtc accccgccgg ggcacaccga acaggccacg
      121 ccggtggggg caccgatgcg caccccggct gaaccctgga caatgctacc gccatactgc
      181 gtcatgtcgc cctgacgcgc cgccggtttt ccgctcatcg taaaatcctt ttgaaataaa
      241 taagaaccag aagcctagcg ccagtcaaca acaggaaatg ataatgagtt aacaccccgg
      301 aatttttcag aatttataaa aggcaaatta caggcacaaa aaaagcgccg tgcggcgctt
      361 ttttcggaaa tccggtctta tttgctgccc gggatgttga aacgcttgtt gaagcggtca
      421 acacggccac cggtagcaac atcacgctgt ttgccagtga agaacgggtg gcacttgctg
      481 cacacgtcga ggttcaggtc atgaccaacg gtggagcgga ttttcattac gttaccgcaa
      541 gagcagctag cagtaatttc ttcgtatttc gggtgaatat cttttttcat gggaaaacct
      601 cggtttaagg ccgcgtcgct cttccagccc taacgccaga caccacgcga tgttaaaagt
      661 atagcttcaa tacgatcatt tcgtacgaag gcgcgaaatc atacagaaat taaccagcgt
      721 atgcaaactg atccgcactc ttctacggca atgtgtatac taacccaccg aatttcaagt
      781 caggatgatg ctatgcccgt tgcccacgtt gccttgcccg ttccgcttcc tcgtaccttt
      841 gactatctgc tgccagaagg catgacggtt aaagccgggt gtcgcgtgcg cgtgccgttt
      901 ggcaaacagc aggagcgcat cggggttgtg gtgtcagtta gcgatgtcag tgagctgccg
      961 cttaacgagc tgaaagcggt agtggaagtg ctggacgttg agccggtatt tactcactcc
     1021 gtctggcggt tactgctctg ggcggcagat tactatcatc atccgattgg cgatgtgctg
     1081 tttcatgcct tgccgatttt actgcgccag gggcggcctg cggcgaacgc gccgatgtgg
     1141 tactggtttg ccactgaaca aggccaggcg gtggatctga acagcctgaa acgctccccc
     1201 aagcaacaac aggcgctggc ggcgttacgg caaggcaaaa tctggcgcga ccaggtcgcc
     1261 acgctcgaat ttaatgatgc cgcgttgcag gcgctacgca aaaaaggtct gtgtgattta
     1321 gcaagtgaaa caccagagtt tagcgactgg caaacgaact atgccgtttc tggtgagcgg
     1381 ttgcgattga ataccgaaca ggccaccgcc gttggcgcaa ttcatagcgc ggcagatact
     1441 ttttctgcct ggctgctggc gggcgttacc ggttccggta aaacggaggt ttatctcagt
     1501 gtactggaaa acgtgctcgc tcagggcaaa caggcgctgg tgatggtgcc ggaaatcggc
     1561 ctgacaccgc aaactatcgc ccgttttcgt gaacgtttta atgcccccgt ggaagttctg
     1621 cattccggcc tgaacgacag cgagcggctt tcggcgtggt tgaaagcgaa aaatggcgag
     1681 gcggcgattg tgatcggcac ccgctccgcg ctgtttacgc cgtttaaaaa tctcggcgtg
     1741 attgtcattg atgaagagca cgacagctcc tacaagcagc aggaaggctg gcgctatcat
     1801 gcccgcgacc tggcggtgta tcgtgcgcat agcgagcaaa tcccgattat tcttggctcc
     1861 gcaacgcccg cgctggaaac gttgtgcaac gtccagcaga aaaaataccg cctgctgcgc
     1921 ctgacgcgcc gggcggggaa tgcgcgtccg gcaattcaac acgtgctgga tttaaaaggt
     1981 cagaaggtgc aggcaggtct ggctccggcg ttaatcaccc gtatgcgcca acatttacag
     2041 gccaacaatc aggttatcct ctttcttaat cgtcggggtt ttgcgcctgc gctactgtgc
     2101 cacgactgcg gctggattgc cgaatgccca cgttgcgatc actactacac gctgcatcag
     2161 gcgcaacagc atttgcgctg tcaccactgt gacagtcagc gtccggtgcc gcgccagtgc
     2221 ccttcctgcg gttccacgca cctggtaccc gtggggctgg gcaccgaaca gcttgaacag
     2281 acgcttgcgc cgctgttccc tgatgtgccc atttctcgta tcgaccgcga taccaccagc
     2341 cgcaaagggg cgctggaaca gcaactggcg gaagtacatc gcggcggtgc gaggattttg
     2401 atcggcacac aaatgctggc gaaaggtcac cactttccgg atgtgacgct ggtggcgtta
     2461 ctggatgtgg acggcgcgct gttttctgcc gattttcgct cggcagagcg tttcgctcag
     2521 ctttacaccc aggtcgctgg tcgtgccggg cgtgcgggta aacaaggcga agtggtgctg
     2581 caaacgcacc atccagaaca tcctctgttg caaacgttgc tctataaagg ctacgacgcc
     2641 tttgccgaac aggcgctggc tgagcgacgg atgatgcaac tgccgccatg gaccagccat
     2701 gtgattgtgc gtgcggaaga tcataacaat cagcatgcgc cgctgttcct gcaacaactg
     2761 cgtaatctga tcctctccag cccgctggca gacgacaaac tgtgggttct cggtccggtt
     2821 ccggcactgg cacctaaacg tggcggtcgc tggcgctggc agatattgtt gcagcaccct
     2881 tcccgcgtgc gcttgcaaca catcattagt ggtacgctgg cgctcatcaa tacaataccg
     2941 gattcccgca aggtgaaatg ggtactggat gttgatccga ttgagggtta aaccgcttac
     3001 gatgcgaggc ggatcgaaaa attcaatatt catcacactt ttcatgaaaa ttctgtaacc
     3061 gttttcacgc gctatctgct aaaaatgttg ccgatgtgaa gtaaacatgg atgtagtacg
     3121 cctgacgtgc caggcgagga gtgagtgtga aagcgaagaa gcaggaaact gccgcgacca
     3181 tgaaagacgt tgccctcaag gcaaaagtct ctacagcgac tgtctcccga gcattaatga
     3241 atcccgataa agtctcccag gccacccgta atcgggttga aaaagcggcc cgggaagtgg
     3301 gttatttacc gcagcctatg gggcgcaacg tcaagcgtaa tgaatcccgc accattctgg
     3361 tgattgtccc ggatatctgc gatcccttct ttagcgaaat tattcgcggt atcgaagtta
     3421 cggcggcaaa tcacggatat ctggtgctga ttggcgactg tgcgcatcaa aatcagcagg
     3481 aaaaaacctt tatcgatttg atcatcacca agcaaattga tggcatgttg ctgctgggtt
     3541 caaggctgcc gtttgatgcc agcattgagg aacagcgtaa tctgccgccg atggtgatgg
     3601 cgaacgaatt cgcaccggaa ctggagctac ctacagttca tatcgacaat ctgaccgccg
     3661 catttgatgc agtaaattat ctatatgagc aagggcataa acggattggc tgtatagccg
     3721 gtcccgaaga gatgccgctg tgtcactacc gcctgcaagg ttacgttcag gcgctgcgtc
     3781 gctgcggcat tatggttgat ccgcaataca tcgcccgtgg cgacttcacc ttcgaagccg
     3841 gaagcaaagc gatgcagcag ctgcttgatc ttccacaacc gcctactgct gtcttctgcc
     3901 atagcgatgt gatggcgctc ggcgcacttt ctcaggcaaa acgccagggg ctgaaagtcc
     3961 cggaagacct ttccataatc ggttttgata acatcgacct gacgcaattt tgtgatccgc
     4021 cgctgacaac catcgcgcag ccgcgttacg aaatcggtcg ggaagctatg ctgttattgc
     4081 ttgatcaaat gcaggggcaa cacgttggca gtggctctcg tttaatggac tgcgaactta
     4141 tcatccgggg atcaacacgc gcgttacctt aaagtaaacc tttaagactg ccgtgactgg
     4201 tcaaaggccc gccgcttaag taacatggcg ggctgacgaa cgaataaata cagcgaaacg
     4261 atagtggcac aacgagatta tgtacgccgc agccaaccgg caccttcgcg gcgaaaaaag
     4321 agcacctcac ggaaaaagca acgaaatctg cctgcggttt ctcccgctat ggtcgctatt
     4381 gctgccgccg ttcttgtgac ctttatcggt ggtctgtact tcattacgca tcacaagaaa
     4441 gaagagtccg agacgctgca aagccagaaa gtgaccggta acggactacc accaaaacca
     4501 gaagaacgct ggcgctacat taaagagctg gaaagtcgcc agccgggtgt gcgtgcgccc
     4561 acagaacctt ctgccggtgg tgaagtgaaa acgccggagc aactgacacc agaacaacgt
     4621 cagcttcttg aacaaatgca ggctgatatg cgccagcagc caacgcagct ggttgaagtt
     4681 ccgtggaatg aacagacgcc ggaacagcgt cagcaaacgc tacaacgcca gcgtcaggcg
     4741 cagcaattag cggagcagca acgcctggct cagcagtcgc gtacgactga acaaagctgg
     4801 cagcagcaga cgcgtacgtc gcaagccgcg ccggtacagg cgcaaccgcg ccagtctaaa
     4861 ccggcttcta ctcagcagcc gtaccaggat ctgctgcaaa cccctgcgca cacgaccgcg
     4921 cagtcgaagc cgcagcaagc tgcgccggtt gctcgtgccg ctgacgcgcc aaaaccgacg
     4981 gcggagaaaa aagacgaacg ccgctggatg gtgcagtgcg gttcgttcag aggcgcggaa
     5041 caggcagaga cggtacgtgc tcagctggcg ttcgaaggat ttgactcgaa aatcaccacc
     5101 aacaatggct ggaatcgtgt ggtcattggc ccggtgaaag gcaaagagaa cgcagacagc
     5161 accctcaatc ggttgaagat ggcgggtcat acaaactgca ttcggctcgc cgccgggggt
     5221 tgaaaccctc aaaatccccc ccatctataa ttgcattatg ccccgtactt ttgtacgggg
     5281 tttgtactct gtattcgtaa ccaaggggtc agctcgtgac aactatagta agcgtacgcc
     5341 gtaacggcca tgtggtcatc gctggtgatg gtcaggccac gttgggcaat accgtaatga
     5401 aaggcaacgt gaaaaaggtc cgccgtctgt acaacgacaa agtcatcgcg ggctttgcgg
     5461 gcggtactgc ggatgctttt acgctgttcg aactgtttga acgtaaactg gaaatgcatc
     5521 agggccatct ggtcaaagcc gccgttgagc tggcgaaaga ctggcgtacc gatcgcatgc
     5581 tgcgcaaact tgaagcactg ctggcagtcg cggatgaaac tgcatcgctt atcatcaccg
     5641 gtaacggtga cgtggtgcag ccagaaaacg atcttattgc tatcggctcc ggcggccctt
     5701 acgcccaggc tgcggcgcgt gcactgttag aaaatactga actgagtgct cgtgaaattg
     5761 ctgaaaaggc gttggatatt gcaggcgaca tttgcatcta taccaaccat ttccacacca
     5821 tcgaagaatt aagctacaaa gcgtaaggat ctcccatgtc tgaaatgacc ccacgcgaaa
     5881 tcgtcagcga actggataag cacatcatcg gccaggacaa cgccaagcgt tctgtggcga
     5941 ttgctctgcg taaccgctgg cgtcgcatgc agctcaacga agagctgcgc catgaagtga
     6001 ccccgaaaaa tatcctgatg atcggcccga ccggtgtcgg taaaactgaa atcgcccgtc
     6061 gtctggctaa gctggcgaat gcgccgttca tcaaagttga agcgaccaaa ttcaccgaag
     6121 tgggctacgt cggtaaggaa gtggattcta ttattcgcga tctgaccgat gccgccgtga
     6181 aaatggtacg cgtccaggct atcgagaaaa accgttatcg cgctgaagaa ctggcagaag
     6241 aacgtattct cgacgtgctg atcccacctg ctaaaaacaa ctggggacag accgaacagc
     6301 agcaggaacc gtccgctgct cgtcaggcat tccgcaaaaa actgcgtgaa ggccagcttg
     6361 atgacaaaga aatcgagatc gatcttgccg cagcaccgat gggcgttgaa attatggctc
     6421 ctccaggcat ggaagagatg accagccagc tgcagtccat gttccagaac ctgggcggcc
     6481 agaagcaaaa agcgcgtaag ctgaaaatca aagacgccat gaagctgctg attgaagaag
     6541 aagcggcgaa actggtgaac ccggaagagc tgaagcaaga cgctatcgac gctgttgagc
     6601 agcacgggat cgtgtttatc gacgaaatcg acaaaatctg taagcgcggc gagtcttccg
     6661 gtccggatgt ttctcgtgaa ggcgttcagc gtgacctgct gccgctggta gaaggttgca
     6721 ccgtttccac caaacacggg atggtcaaaa ctgaccacat tctgtttatc gcttctggcg
     6781 cgttccagat tgcgaaaccg tctgacctga tcccggaact gcaaggtcgt ctgccaatcc
     6841 gcgttgaact gcaggcgctg accaccagcg acttcgagcg tattctgacc gagccgaatg
     6901 cctctatcac cgtgcagtac aaagcactga tggcgactga aggcgtaaat atcgagttta
     6961 ccgactccgg tattaagcgc atcgcggaag cggcatggca ggtgaacgaa tctaccgaaa
     7021 acatcggtgc tcgtcgttta cacactgttc tggagcgttt aatggaagag atttcctacg
     7081 acgccagcga tttaagcggt caaactatca tcattgacgc agattatgtg agcaaacatc
     7141 tggatgcgtt ggtggcagat gaagatctga gccgttttat cctataatcg cgttcaatca
     7201 ttttcatcat tgtttgatgg ggctgaaagg ccccattttt attggcgcgt attatgactg
     7261 aacaacaaat tagccgaact caggcgtggc tggaaagttt acgacctaaa accctccccc
     7321 tcgcctttgc tgcaattatc gtcgggacag cgctggcatg gtggcaaggt cacttcgatc
     7381 cgctggtcgc cctgctggca ctgattaccg ccgggctatt acagatcctt tctaacctcg
     7441 ccaatgatta cggcgatgcg gtaaaaggca gcgataaacc tgaccgcatt gggccgctac
     7501 gcggcatgca aaaaggggtc attacccagc aagagatgaa acgggcgctc attattaccg
     7561 tcgtgctcat ctgtctctcc gggctggcac tggttgcagt ggcatgccat acgctggccg
     7621 attttgtcgg tttcctgatt cttggcgggt tgtcgatcat tgccgctatc acctacaccg
     7681 tgggcaatcg tccttatggt tatatcggtc tgggtgatat ttccgtactg gttttctttg
     7741 gctggttgag tgtcatgggg agctggtatt tacaggctca tacattgatt ccggcactga
     7801 tccttccggc gaccgcatgc ggcctgctgg caacggcagt actgaatatt aataacctgc
     7861 gtgatatcaa tagcgaccgc gaaaatggca aaaacacgct ggtggtgcgc ttaggtgaag
     7921 tgaacgcgcg tcgttatcat gcctgcctgc tgatgggctc gctggtgtgt ctggcgctgt
     7981 ttaatctctt ttcgctgcat agcctgtggg gctggctgtt cctgctggcg gcaccattac
     8041 tggtgaagca agcccgttat gtgatgcggg aaatggaccc ggtggcgatg cgaccaatgc
     8101 tggaacgtac tgtcaaggga gcgttactga ctaacctgct gtttgtttta gggatattcc
     8161 taagccagtg ggcagcataa ctgacaaata tcaattaaca attgatgatt ttgccaacag
     8221 cccacatagc gcgatatact gaaaattctc gcagcaactg aatgttaagc ctatgaaata
     8281 cgatacttcc gagctttgtg acatctatca agaagatgtt aacgtcgtgg aaccgctgtt
     8341 ctccaacttt ggcggacggg cgtcgtttgg cggacaaata atcacggtaa aatgtttcga
     8401 ggacaacggg ttgctgtacg atctgctcga acagaatggc cgtggtcgtg ttcttgtcgt
     8461 cgatggcggt ggttctgttc gtcgcgcact ggtcgatgct gaactggcgc gtctggcagt
     8521 acaaaatgaa tgggaaggtc tggtcattta cggcgcggtg cgtcaggtag atgacctgga
     8581 agagttggat atcggcatcc aggcgatggc ggcaattccg gttggtgccg ctggcgaagg
     8641 cattggcgaa agcgatgtcc gcgtcaattt tggcggtgtc accttcttct ccggcgacca
     8701 tctttatgcc gacaataccg ggattattct ttcagaagat ccgctggata ttgaatgata
     8761 gaaaaggcac cgcaaggtgc cttttttctg cgttacctgt tggcctacac agtaaagaaa
     8821 ttacgcgaaa gatgaagcgt aatcagacct cttccatgcg acccagcagg gcctgcagac
     8881 gttcctgcca gccgttctgc tgttctttca gatggttgtt ctcacgctcc agctcttcgc
     8941 gctgatgctg ggcattttga acttcctgcg acagtgagtt gtttttttct ttcagctctt
     9001 cgatttccat ctgcaacaga gtgatggtat caatcgcctg ctgtactttt gcttccagtt
     9061 tctcaaacac ttctaatgac attgtcatac ctctcctgaa ttgcaaggcg ttgatggata
     9121 aaaaatcctc gtcccgatta ccggtgacgc cttaataaat acgagcgcac tttagttagc
     9181 tccgattgta tgaagccgcg ccatcgctgt ccagcggcac gccttgcaga ttacggtttg
     9241 ccacactttt catccttctc ctggtgacat aatccacatc aatcgaaaat gttaataaat
     9301 ttgttgcgcg aatgatctaa caaacatgca tcatgtacaa tcagatggaa taaatggcgc
     9361 gataacgctc attttatgac gaagcacaca cattttaagt tcgatatttc tcgtttttgc
     9421 tcgttaacga taagtttaca gcatgcctac aagcatcgtg gaggtccgtg actttcacgc
     9481 atacaacaaa cattaactct tcaggatccg attatgagtc aaacatcaac cttgaaaggc
     9541 cagtgcattg ctgaattcct cggtaccggg ttgttgattt tcttcggtgt gggttgcgtt
     9601 gcagcactaa aagtcgctgg tgcgtctttt ggtcagtggg aaatcagtgt catttgggga
     9661 ctgggggtgg caatggccat ctacctgacc gcaggggttt ccggcgcgca tcttaatccc
     9721 gctgttacca ttgcattgtg gctgtttgcc tgtttcgaca agcgcaaagt tattcctttt
     9781 atcgtttcac aagttgccgg cgctttctgt gctgcggctt tagtttacgg gctttactac
     9841 aatttatttt tcgacttcga gcagactcat cacattgttc gcggcagcgt tgaaagtgtt
     9901 gatctggctg gcactttctc tacttaccct aatcctcata tcaattttgt gcaggctttc
     9961 gcagttgaga tggtgattac cgctattctg atggggctga tcctggcgtt aacggacgat
    10021 ggcaacggtg taccacgcgg ccctttggct cccttgctga ttggtctact gattgcggtc
    10081 attggcgcat ctatgggccc attgacaggt tttgccatga acccagcgcg tgacttcggt
    10141 ccgaaagtct ttgcctggct ggcgggctgg ggcaatgtcg cctttaccgg cggcagagac
    10201 attccttact tcctggtgcc gcttttcggc cctatcgttg gcgcgattgt aggtgcattt
    10261 gcctaccgca aactgattgg tcgccatttg ccttgcgata tctgtgttgt ggaagaaaag
    10321 gaaaccacaa ctccttcaga acaaaaagct tcgctgtaat atgactacgg gacaattaaa
    10381 catgactgaa aaaaaatata tcgttgcgct cgaccagggc accaccagct cccgcgcggt
    10441 cgtaatggat cacgatgcca atatcattag cgtgtcgcag cgcgaatttg agcaaatcta
    10501 cccaaaacca ggttgggtag aacacgaccc aatggaaatc tgggccaccc aaagctccac
    10561 gctggtagaa gtgctggcga aagccgatat cagttccgat caaattgcag ctatcggtat
    10621 tacgaaccag cgtgaaacca ctattgtctg ggaaaaagaa accggcaagc ctatctataa
    10681 cgccattgtc tggcagtgcc gtcgtaccgc agaaatctgc gagcatttaa aacgtgacgg
    10741 tttagaagat tatatccgca gcaataccgg tctggtgatt gacccgtact tttctggcac
    10801 caaagtgaag tggatcctcg accatgtgga aggctctcgc gagcgtgcac gtcgtggtga
    10861 attgctgttt ggtacggttg atacgtggct tatctggaaa atgactcagg gccgtgtcca
    10921 tgtgaccgat tacaccaacg cctctcgtac catgttgttc aacatccata ccctggactg
    10981 ggacgacaaa atgctggaag tgctggatat tccgcgcgag atgctgccag aagtgcgtcg
    11041 ttcttccgaa gtatacggtc agactaacat tggcggcaaa ggcggcacgc gtattccaat
    11101 ctccgggatc gccggtgacc agcaggccgc gctgtttggt cagttgtgcg tgaaagaagg
    11161 gatggcgaag aacacctatg gcactggctg ctttatgctg atgaacactg gcgagaaagc
    11221 ggtgaaatca gaaaacggcc tgctgaccac catcgcctgc ggcccgactg gcgaagtgaa
    11281 ctatgcgttg gaaggtgcgg tgtttatggc aggcgcatcc attcagtggc tgcgcgatga
    11341 gatgaagttg attaacgacg cctacgattc cgaatatttc gccaccaaag tgcaaaacac
    11401 caatggtgtg tatgtggttc cggcatttac cgggctgggt gcgccgtact gggacccgta
    11461 tgcgcgcggg gcgattttcg gtctgactcg tggggtgaac gctaaccaca ttatacgcgc
    11521 gacgctggag tctattgctt atcagacgcg tgacgtgctg gaagcgatgc aggccgactc
    11581 tggtatccgt ctgcacgccc tgcgcgtgga tggtggcgca gtagcaaaca atttcctgat
    11641 gcagttccag tccgatattc tcggcacccg cgttgagcgc ccggaagttc gcgaagtgac
    11701 tgcattgggt gcggcctatc ttgctggtct ggcggtcggt ttctggcaga acctcgacga
    11761 gctgcaagag aaagcggtga ttgaacgcga gttccgtcca ggcatcgaaa ccactgagcg
    11821 taattaccgt tacgcaggct ggaaaaaagc ggtcaaacgc gcgatggcgt gggaagaaca
    11881 cgacgagtaa tgtaaatgcc ggatgaagcg tttatgccgc attcggtagt cctgaaaccg
    11941 tgcgggggca accccgcaca catcaataat cccacccttc ccctgtgcta cacttcgcgc
    12001 cattccttac tgcttagagt ttgctatgag acgagaactt gccatcgaat tttcccgcgt
    12061 caccgaatct gcggcgctgg ctggctacaa atggttagga cgcggcgata aaaacaccgc
    12121 ggacggcgcg gcggtaaacg ccatgcgtat tatgctcaac caggtcaaca ttgacggcac
    12181 catcgtcatt ggtgaaggtg aaatcgacga agcaccgatg ctctacattg gtgaaaaagt
    12241 cggtactggt cgcggcgacg cggtagatat tgctgttgat ccgattgaag gcacgcgcat
    12301 gacggcgatg ggccaggcta acgcgctggc ggtgctggca gtaggcgata aaggctgctt
    12361 cctcaatgcg ccggatatgt atatggagaa gctgattgtc gggccgggag ccaaaggcac
    12421 cattgatctg aacctgccgc tggcggataa cctgcgcaat gtagcggcgg cgctcggcaa
    12481 accgttgagc gaactgacgg taacgattct agctaaacca cgccacgatg ccgttatcgc
    12541 tgaaatgcag caactcggcg tacgcgtatt tgctattccg gatggcgacg ttgcggcctc
    12601 aattctcacc tgtatgccag acagcgaagt tgacgtgctg tacggtattg gtggcgcgcc
    12661 ggaaggcgta gtttctgcgg cggtgatccg cgcattagat ggcgacatga acggtcgtct
    12721 gctggcgcgt catgacgtca aaggcgacaa cgaagagaat cgtcgcattg gcgagcagga
    12781 gctggcacgc tgcaaagcga tgggcatcga agccggtaaa gtattgcgcc tgggcgatat
    12841 ggcgcgcagc gataacgtca tcttctctgc caccggtatt accaaaggcg atctgctgga
    12901 aggcattagc cgcaaaggca atatcgcgac taccgaaacg ctgctgatcc gcggcaagtc
    12961 acgcaccatt cgccgcattc agtccatcca ctatctggat cgcaaagacc cggaaatgca
    13021 ggtgcacatc ctctgattga tttgatcgat tgagccttcc agtccttcgg gactggaatt
    13081 tttttgttcg gagaacgaag ataaggcaag ttaatcaaaa caggagaaaa acatggctga
    13141 ttgggtaaca ggcaaagtca ctaaagtgca gaactggacc gacgccctgt ttagtctcac
    13201 cgttcacgcc cccgtgcttc cgtttaccgc cgggcaattc accaagcttg gccttgaaat
    13261 cgacggcgaa cgcgtccagc gcgcctactc ctatgttaac tcgcccgata atcccgatct
    13321 ggagttttac ctggtcaccg tccccgatgg caaattaagc ccacgattgg cggcactgaa
    13381 accaggcgat gaagtgcagg tggttagcga agcagctggc ttctttgttc tggatgaagt
    13441 accggactgc gaaacgctat ggatgctggc aaccggtaca gcgattggcc cttatttatc
    13501 gattctgcaa ctaggcaaag atttagatcg cttcaaaaat ctggtcctgg ttcacgccgc
    13561 acgttatgcc gccgacttaa gctatttgcc actgatgcaa gaactggaaa aacgctacga
    13621 agggaaactg cgcattcaga cggtggtcag tcgggaaacg gcagcggggt cgctcaccgg
    13681 gcggataccg gcgttaattg aaagtgggga actggaaagt gcgattggcc tgccgatgaa
    13741 taaagaaacc agccatgtga tgctgtgcgg caatccacag atggtgcgcg atacacaaca
    13801 gttgctgaaa gagacccggc agatgacgaa acatttacgt cgccgaccgg gccatatgac
    13861 agcggagcat tactggtaag cggttactta tcgataaacg gcacgatgag caaatccgca
    13921 ctcatcttat tgatcatccc gcgatatgcc ggcatcaaac ggttgataaa tgagtgatga
    13981 tgaccacaga caaggaggtc gcactgctct ttttgcataa tttccagcag tgtttccggc
    14041 atttctccgc gttcaatacg cagttttgtc ttcggccatt gaatattttt cgtcagttta
    14101 tacagcttgt tatccgactt attcttcaac aattgaagaa tatcttctgt tgcagggaag
    14161 tagatacccg gatacaactc gcttaagcca tcatcaatat gaattaacgt caggtgagcg
    14221 tcattatgtc tggcgagctc cagagcttta ttcaccagta aggcatcttc ttcattcccg
    14281 gaaattgcca cgccaatgtg tttataagcc atgtttaact ccttctaaag caactccatc
    14341 aagctaacga acgcagtgat aactcaaaaa taatcatctc ggcctggcat gagaaagtga
    14401 aggccgcatc aagctcaact tgcccctcca gatccttaat cttgtaggcc acgctggccc
    14461 cttcatctgc agaggatgca gcggcggcaa gctctttcag tttggtcata aaagactctg
    14521 cttcttcgcg ggtggcaaaa aagcgcgaaa acttactggt acagttgtcg ttatcaatca
    14581 ccgtaccgat atcaatcgca catcctttag tactgcattt atctacgaca tctttcatag
    14641 ggcacctctg tatattcgcc tctctgtcga ttacgactta agaataatgc gccgttaagg
    14701 gaagaacaaa caagtaatga tcttatggat taccattttt tttgatattg cttaaggtga
    14761 agagttcaga aggattttcc gggtattgtc atttgcatcg tggaaataac aatcccggaa
    14821 aaaaatagca gtaagagata tattaaaggt taattacttg atttattgtc ggctttatac
    14881 ttcacatcct gagtatcttt accatattta ttttcgcctt gtgtgccaac aaacgcacca
    14941 agatcgataa gcatcatcac cagaatcaac gtcgggacaa aacgccccac cgcccattgc
    15001 cagacacccg gtaaaatcgc ccagttaccc gccagcagca tccacgccac aatcatcaga
    15061 aatgcccatg cgccggaacg cccgcgatca tgcaagcgct taacagttac tgccgctgtt
    15121 ggccaaagca agcacacaag gcaaaacgcc gcggtctgaa tatcgagtaa atttttaccc
    15181 gccagtgaga aaagcaccag catgcctgcg aaccacaggc ctatccaaat ccagaaatca
    15241 cggcgtccaa tacgcccttt aaatgagaat aaccattgct gtatggtcat gtaagttcct
    15301 tgatggttgt cttttccagg attctaccct tttgacaagg gcgacagata tcgttttaat
    15361 cggagccagt cataacaaaa ggtactgtca atgaagccag ggtgtacgct gttttttctc
    15421 ttatgttctg cattaaccgt tacaacaacg gcgcatgcac aaacaccaga tacggcaacg
    15481 accgcgcctt atctgctggc tggagcccct actttcgatc tctccatcag ccagtttcga
    15541 gaagacttta acagccagaa tcctagcctg ccactgaacg aatttcgtgc catcgacagc
    15601 agtcccgaca aagccaatct cactcgtgct gcaagtaaaa ttaacgagaa cttgtatgct
    15661 tctacagcgc tggagcgcgg taccttaaaa atcaaaagca ttcaaatgac ctggctaccc
    15721 atccaggggc cagagcaaaa agcagcgaaa gcgaaagctc aggaatacat ggcagcagtg
    15781 atccgcacac tcaccccatt aatgaccaaa acacaaagcc agaaaaaact gcagtcgcta
    15841 ctaacggcgg ggaaaaacaa acgttattac accgagacag aaggtgcact gcgttatgtt
    15901 gtcgcggaca acggcgaaaa ggggctgacc ttcgctgttg aaccgattaa gctggcgcta
    15961 tctgaatcgc ttgaaggttt gaataaatga caaaaagcaa agcctttgtg ccgatgaatc
    16021 tctatactgt ttcacagacc tgctgccctg cggggcggcc atcttccttt attcgcttat
    16081 aagcgtggag aattaaaatg cgacatcctt tagtgatggg taactggaaa ctgaacggca
    16141 gccgccacat ggttcacgag ctggtttcta acctgcgtaa agagctggca ggtgttgctg
    16201 gctgtgcggt tgcaatcgca ccaccggaaa tgtacatcga tatggcgaag cgcgaagctg
    16261 aaggcagcca catcatgctg ggtgcgcaaa acgtggacct gaacctgtcc ggcgcattca
    16321 ccggtgaaac ttctgccgct atgctgaaag acatcggcgc tcagtacatc atcatcggcc
    16381 actctgaacg tcgtacttac cacaaagagt ctgacgaact gattgcgaaa aaattcgcgg
    16441 tgctgaaaga gcagggtctg actccggttc tgtgcatcgg tgaaaccgaa gctgaaaacg
    16501 aagcgggaaa aactgaagaa gtttgcgcac gtcagatcga cgcggtactg aaaactcagg
    16561 gtgctgcggc attcgaaggt gcggttatcg cttacgaacc tgtatgggca atcggtactg
    16621 gcaaatctgc aactccggct caggcacagg ctgttcacaa attcatccgt gaccacatcg
    16681 ctaaagttga cgctaacatc gctgaacaag tgatcattca gtacggcggc tctgtaaacg
    16741 cgtctaacgc tgcagaactg tttgctcagc cagacatcga cggcgcgctg gttggcggtg
    16801 cttctctgaa agctgacgct ttcgcagtga tcgttaaagc tgcagaagcg gctaaacagg
    16861 cttaagtctg acaggtgccg gatttcatat ccggcactta ctttccttaa ctcctcgcct
    16921 taacgcaaaa tctcacactc atgatcctgg atttcctcgg ctgaagcacg gttcagcgtc
    16981 agtagatttc gttgtgtcgc cagcaacaca aacgaattat cactctgccg taccatcgcc
    17041 agcccgtagc ttcccatatg ttcccgcgcc tcaggcactt cttctgcaag catcataaat
    17101 gggctgcgtt gtaccagttc gctttccgtt acccgacgcg ccaggtattc atgcccgcgc
    17161 aaaccacctg gcagtggcaa ccagcggctg ctgatgttcg ccagattttt atccagttgt
    17221 tcgcgcacat caggacgaat acaagagata tgaatatgaa aatggttttg cgtacgcccg
    17281 gtgcgggagt tgatcgccaa agaaaccgcg cgatcgggaa ccggctggcc gtattttttg
    17341 ctcataaaat cacgcgcctg ccaggccaac caaaagaagt tcggcgttga aggatcggtc
    17401 aacaaaggac tttcagtacc gttaatacga tacgttggca tcaacagata ttgcagtgga
    17461 ccattaagat cttttaaaac cacgtatccg gcattgggtt tgacttccgc acatggcgaa
    17521 ggattttgat tttgctgctg attgggcaaa cattcctcaa ggacaatctt acgtaatgta
    17581 tccgactctt caccggttaa tttccagtaa ccaataccgg aagccacaac ggcgataact
    17641 atcatcacca aaaaaagaag acccgctttt ttcatctttt tttccctgta cctcaaagag
    17701 atgcaagggt aacgcaaaat cgtgacaaat aaaaaacccg gtcgcgagaa accaccgggt
    17761 ttgataatta tcctggggaa atcagcgttt gctgatctga tcgaacgtac cgccgttagc
    17821 aaaatgctct ttttgcgctt tcgtccagcc gccgaactct tcatcaatgg tgaataactt
    17881 cagctttgga aacgcatttt cgtacttttt cgctacttca gcgtcgcgcg gacggtagta
    17941 gtttttcgcg gcaatttcct gaccttctgg cgagtagaga tatttcaggt aggcttccgc
    18001 cacctctttg gtgccttttt tctcgaccac tttatcgacc accgacacgg ttggctctgc
    18061 gaggatagac tcactcggcg tgacgatttc gaatttatct ttccccagtt cattcgctgc
    18121 cagcagagct tcgttttccc aggcgatcag tacatcgcca atcccgcgct cgacaaaggt
    18181 gttagtggag ccgcgcgcgc cagaatccag aacttcgacg tttttataca gtgcccgaac
    18241 aaaatcctgt gcttttgcct gatcgttgtt gttgtgatgc agcgcgtagc cccaggcagc
    18301 caggtagttc cagcgtgcgc caccagagct tttcggatta ggcgtgatca ccgaaacacc
    18361 cggtttaatc agatcgttcc agtcatggat ctgcttcgga ttgcccttac gcaccaggaa
    18421 aacaatggtg gaagtgtacg gtgcggagtt atccggcaga cgtttgatcc actctttatc
    18481 aatccgcccg cgttccgcaa tcgcgtccac gtcataggcc agagccagcg tgacaacatc
    18541 agcttcaata ccgttgatta ccgacgtcgc ttgtttacct gaaccaccgt gtgactgacg
    18601 aatcaccacg ttatcaccag tttgctgttt ccagtgggcg ctgaatgcct tgttgtactg
    18661 ttcgtacaat tcgcgcgttg gatcatatga aacgttaaga agctgaatat cctttgccat
    18721 aacgttggtt gccgccagca aaaatgttaa ccctacgccc cacttgttca tcgcccgact
    18781 ctcttatgtt gtgttgtgat gagcaaagcg tgccagaagg ttaaccaaac attaaagaat
    18841 aaaaaaagat tggctataac ttgcgggtat atgttggggg ttaaaaaggc ggaagaaatc
    18901 cgcctcatat tgctgacaaa gtgcgctttg tccatgccgg atgcggcgcg aacgccttat
    18961 ccggcctaca aaagtttgca aattcaataa attgcagaat tcatgtaggc ctgataagcg
    19021 aagcgcatca ggcatttttg cttctgtcat cggtttcagg gtaaaggaat ctgccttttt
    19081 ccgaaatcat taatacagtt ttttcgcgca gtccagccag tcacctttga acggacgctt
    19141 catgttttcg atagcgtcga tgatgtcgtg gtgaaccagc tgttcgttct ggatacctac
    19201 acaacgaccg ccgtaacctg ccagcagcag atcgatagcg taagcgccca tacgggaagc
    19261 cagaatacgg tcgtaaggca ccggagaacc accgcgctgg atgtggccca gcacagttgc
    19321 gcgggtttca cgaccggttt ctttctcgat gaaatgcgcc agttcgtcaa catcacacat
    19381 atgttcggta atcgccacga tcgcgtgttt tttacctttc gcgatacccg ctttgatttc
    19441 gtttaccagg tcttcacggc tgaattcaac ttccggaacc acaacgaatt cacagccacc
    19501 ggcaatggcc gcagccaacg tcagatcgcc acaataacgg cccatcactt ccaccacgga
    19561 aatacgctgg tgagaagaag aggtgtcacg cagacggtcg atcgcttcta caacggtgct
    19621 cagcgcagtg aagaaaccga tagtgtagtc agtgcctttg atgtcgttgt cgatagtgcc
    19681 cggcagaccg atgcacggga agcccatttc ggtcagacgc attgcaccca tgtaggaacc
    19741 gtcaccgccg ataaccacca gcgcgtcgat cccacgtttt ttcaggtttt cgatagccac
    19801 ggcgcggatg ttctcgtcgc ggaattccgg gaagcgcgca gaaccgagga acgtaccgcc
    19861 acggttgatc atgtcagaaa cgctgtaacg gtctagctgt accatacggt cttcatacag
    19921 acccagatag ccgtcataaa tgcccattac ttccagacct tctgtcagcg cagaacgaac
    19981 aaccccgcga attgcggcgt tcatgcctgg cgcatcaccg ccgcttgtca acacaccgat
    20041 tttcttaatc atgactacct ctgaactttg gaatgcaaaa taaaatctgt tgccggaagt
    20101 cttcttgcac atcgaagtga tccaacgaat gtgcaaatag tataacaatc acttcctgct
    20161 gaattgattc aggtcaggcc aaatggcggt attttataca caaaatgcgg gtctggctct
    20221 cttttatact gattatgaaa gcatagaccg tttaccctcc ctgggtacga cggaacaggg
    20281 gtcctgatgg ataattacat ccgatcccgg aaaacgccgt aaaatagcct gctctacctg
    20341 atccgccacc atatgtgcct gaaccaaagg cagagagtct tccatttcca aatgaatctg
    20401 aataaagcgg gtcggccctg actgccgcgt gcgaagatcg tgagcgccgc taacacccgg
    20461 ccaggaagtc acgatatcaa taatttcttg ccgttcctca tcaggcaatg cgcgatccag
    20521 taatgactgt accgcctcat atcccatgcg taacgcgcta tataaaatat agatgccgat
    20581 tcccaatgca aacagagcat cggcgcgatg ccagccgtac caggacaacc ccagcgccag
    20641 cagaattgcg ccgttcatca taacatcaga ctggtaatgt agcatatcag cccgcaccgc
    20701 ctggctttgc gtccggcgca ccacccaacg ctgaaacgag acaaggataa tcgtacaaat
    20761 tagcgccaca attgtcacga taaccccgac gcctggatct gtcatcggtg ttggagatat
    20821 cagatgttga atacccgtca aaaacaggaa tagtgccgaa ccggagataa acatactttg
    20881 cgccagcgcc gcgagggact ctgctttacc gtgaccaaac gagtgattat cgtcggcagg
    20941 ttgcagggaa tatcgcacca ccagtaaatt cgtcaacgac gcgccgatat ccaccagcga
    21001 atccaccagc gcggcgagaa tactcaccga cccggtatac caccatgcaa aaattttaat
    21061 cagcaatagc aacgaagcca tcgccgtcgc agcaatcgcc gcccgactga ccagccgtcc
    21121 ataagattga ttcataaata ctcccgctat caactgacgc tagtataacg gaagcaaatc
    21181 atctgcaatg cattaagcag caggcaaatt gaggataaaa aaaaccccca catcatgtgg
    21241 gggaagacag ggatggtgtc tatggcaagg aaaacagggt ttactactgg gaacgtgagt
    21301 tgctactact caatagcttc aacgatgaac ttttttgcca ttgcgtcacg tcacgcaact
    21361 gctccattcg ttgttgatgt ttctcgttta aaaccgcttg ctgctccggc gttaacaggc
    21421 gatacatttg gttgcggact tttgccatct caacctgacg agcaatttgc tcattcgcca
    21481 ttttttctgc ctgtgcgcgc acagcgtttt catcaaaatt ttctgcggtg acaaggcgat
    21541 gcattgtctc cagttcgcta acattaacag gaggctgttc gtgccgggcc tgttgcataa
    21601 gatctcgcat ctgctgacgc tgatgttcgg ttaaacttat gccgtcgaac atatggctct
    21661 gcgtactgcg ctgcgtaagt tcttcacccg gatgccagtt atcgcctgaa ccgacttcag
    21721 cagcgtggct taatgaactg actgccagcg ttgaggccat gacggcagcg gtaactatgc
    21781 gcatcatttg ctcccaaaat ctttctgtcg cgattcaacg atagagagtt tacgattcag
    21841 gctgcaaaca tgcgtcaggg ggtgtaaaac aacgtaaagt catggattag cgacgtctga
    21901 tgacgtaatt tctgcctcgg aggtatttaa acaatgaata aaatcctgtt agttgatgat
    21961 gaccgagagc tgacttccct attaaaggag ctgctcgaga tggaaggctt caacgtgatt
    22021 gttgcccacg atggggaaca ggcgcttgat cttctggacg acagcattga tttacttttg
    22081 cttgacgtaa tgatgccgaa gaaaaatggt atcgacacat taaaagcact tcgccagaca
    22141 caccagacgc ctgtcattat gttgacggcg cgcggcagtg aacttgatcg cgttctcggc
    22201 cttgagctgg gcgcagatga ctatctcccg aaaccgttta atgatcgtga gctggtggca
    22261 cgtattcgcg cgatcctgcg ccgttcgcac tggagcgagc aacagcaaaa caacgacaac
    22321 ggttcaccga cactggaagt tgatgcctta gtgctgaatc caggccgtca ggaagccagc
    22381 ttcgacgggc aaacgctgga gttaaccggt actgagttta ccctgctcta tttgctggca
    22441 cagcatctgg gtcaggtggt ttcccgtgaa catttaagcc aggaagtgtt gggcaaacgc
    22501 ctgacgcctt tcgaccgcgc tattgatatg cacatttcca acctgcgtcg taaactgccg
    22561 gatcgtaaag atggtcaccc gtggtttaaa accttgcgtg gtcgcggcta tctgatggtt
    22621 tctgcttcat gataggcagc ttaaccgcgc gcatcttcgc catcttctgg ctgacgctgg
    22681 cgctggtgtt gatgttggtt ttgatgttac ccaagctcga ttcacgccag atgaccgagc
    22741 ttctggatag cgaacagcgt caggggctga tgattgagca gcatgtcgaa gcggagctgg
    22801 cgaacgatcc gcccaacgat ttaatgtggt ggcggcgtct gttccgggcg attgataagt
    22861 gggcaccgcc aggacagcgt ttgttattgg tgaccaccga aggccgcgtg atcggcgctg
    22921 aacgcagcga aatgcagatc attcgtaact ttattggtca ggccgataac gccgatcatc
    22981 cgcagaagaa aaagtatggc cgcgtggaac tggtcggtcc gttctccgtg cgtgatggcg
    23041 aagataatta ccaactttat ctgattcgtc cggccagcag ttctcaatcc gatttcatta
    23101 acttactgtt tgaccgcccg ctattactgc tgattgtcac catgttggtc agtacgccgc
    23161 tgctgttgtg gttggcctgg agtctggcaa aaccggcgcg taagctgaaa aacgctgccg
    23221 atgaagttgc ccagggaaac ttacgccagc acccggaact ggaagcgggg ccacaggaat
    23281 tccttgccgc aggtgccagt tttaaccaga tggtcaccgc gctggagcgc atgatgacct
    23341 ctcagcagcg tctgctttct gatatctctc acgagctgcg caccccgctg acgcgtctgc
    23401 aactgggtac ggcgttactg cgccgtcgta gtggtgaaag caaggaactg gagcgtattg
    23461 aaaccgaagc gcaacgtctg gacagcatga tcaacgatct gttggtgatg tcccgtaatc
    23521 agcaaaaaaa cgcgctggtt agcgaaacca tcaaagccaa ccagttgtgg agtgaagtgc
    23581 tggataacgc ggcgttcgaa gccgagcaga tgggcaagtc gttgacggtt aacttcccgc
    23641 ctgggccgtg gccgctgtac ggcaatccga acgcactgga aagtgcgctg gaaaacattg
    23701 ttcgtaatgc tctgcgttat tcccatacga agattgaagt gggctttgcg gtagataaag
    23761 acggtatcac cattacggtg gacgacgatg gtcctggcgt tagcccggaa gatcgcgaac
    23821 agattttccg tccgttctat cggaccgatg aagcacgcga tcgtgaatct ggcggtacag
    23881 gattggggct ggcgattgtt gaaaccgcca ttcagcagca tcgtggctgg gtgaaggcag
    23941 aagacagccc gctgggcggt ttacggctgg tgatttggtt gccgctgtat aagcggagtt
    24001 aaactccgca tttgtaggca ggataaggcg tttacgccgc atccggcatt tgagcaggat
    24061 gcctgatgcg acgctgatag cgtcttatca ggcctacact ccgggggtta ttttccccac
    24121 aaccggcggg aaaaatcttc gatcttgccg ctcagtcggc gcttttgcat cgtccgcgtc
    24181 cagcttttcg ataacccggc ggcggagagt aaacggtgat attgatcgtc atcaaacggc
    24241 atatgccatg cgatggcggc agcctcctgc acggtcacat cgctgacacg ggaaaccaac
    24301 tccagcggcg cgtccgcaga cactttccct ggcgctatca cgctatacaa ccaccccacc
    24361 ttacctgtgt tttgcatcaa ctgcgctata tcgctgatat caaaatggta attgagttta
    24421 tagcaaggcg agcgcggctg gctgacctga attaatgcct ctccccagcg gaaaatatcg
    24481 cccatataaa cattactttc cgtgagaccg tcggttgaga gattttcgcc aaacgcaggc
    24541 gcaacaaaca actccgcctg ttccggaaat tcccgcgccc agtagagata atgctcacga
    24601 ggataatgac acagcgctct gtctggtccg ccgtgaacct ttttctccgc ctgctcgtca
    24661 ccttccagcc ccagctccgt cagcatcaac tcaccatcaa cctggatttt ggcaattgcg
    24721 ctgggtttgc cttcgggata agcctgaatc ttgcctgtgt atacatcaac cggatatcgc
    24781 atctgttccc tctccacgag aaatttcccc attagaccat atttatttta tgtcaggcgt
    24841 gctgttttcg cggtaagtat ccaggcagga actcaatagc aaaccggacg aacgttagtt
    24901 catccggctg tggggattaa ggaagcaggt ttatttcacc gtacctaaaa tttcgatttt
    24961 cgctgctctg gctttgactt tacgtgacca gatagaggta agaattggca ccagaatcga
    25021 agtcacaatg accgccgtcg ctaccagcga agttgctgcc ggagccatcg gtttaaacgc
    25081 aggcaccatt tctgcaatca gcacaggtgt cgctaccgcg gcccctgcgg aactggaagc
    25141 ggcaattccg gcagtgccat cgccaccgcc aatcaattta tcggcgataa tcaacggaat
    25201 accggtcacg ataattactg ccacacccaa caggatcccc agcaaaccag tctgggcaat
    25261 cacagtcaaa tcaatggtat tgcccagcgc gaaggcaaag aatggaatca gcgtttgcac
    25321 cgctttgctg aaaaattctc gtaattcagg gtcaaggttc cccagggcaa agcccaccag
    25381 gaacggtaat actgcgccga cgaaaacatg cggttcaaac gaggcaatcc ctgcagtgcc
    25441 cagaataatc atcgtcatga gcggcccgga ctccaacgac atcaacacaa atgccccagc
    25501 ttcttctttt gtgccgtact gctgcatgat ggaagcgtaa agtccgccat tggtcatatc
    25561 catcgccgcc accagcgcca gcgttgaaag tccggcaaag aatccaactt caacaccatg
    25621 ttccggaata atgcgcgagg caattgccgc aaccacccac gcgacggcaa tttttgttac
    25681 caccagcgta ccggatttac gcaataccgt tcccgtcgcg cttaatttta ttgacgcccc
    25741 catgcaaaaa aaccacaccg ccagaatggg caccgtaccg gtaatcatcc cgttggtgaa
    25801 tgatccaaaa tatttccccg cccccggcga gaaggtgtgg cacagtgcgc caaggaatag
    25861 cgggacgagc atcatccccc ccgggatttt ctcaatcgag cgttttatct gcatttccat
    25921 cacctgtcgg catattttta agggctgatg cgtcattcct caatggagca tcagtgttga
    25981 tggaaacgaa gatagacatt catttaatca ataaaagtga tcaaaaccac atcaattgaa
    26041 acactgtttt atttttatcg gatcattgtt tttattttga aattgatcac aaaaaaacca
    26101 ccgccgttgg cgatggttca ttttttaagc tgatatgcgg cctatacgcc tcattgcagc
    26161 aggcggcaaa tgattatttt ttcgccgcaa aacgtgccgc tgcttcgtcc cagttcacca
    26221 cgttccagaa ctctttaatg tagtccggac ggcggttctg gaatttcagg tagtaagcat
    26281 gttcccacac atccaggccc agaatcggga agccggaagc gccagaaata gcttcaccca
    26341 tcagcggaga atcctggtta gcagtagaaa ccaccgccag tttatcgcct ttcagcacca
    26401 gccatgccca gccggaacca aagcgggaag ctgccgcttt ttcaaattct gctttgaagt
    26461 tatcaacgga gccgaagtca cgttcgatag ccgctttcag gtcaccctgc agggtggtgc
    26521 cttttttcag acctttccag aacaggctgt ggttagcgtg accgccagcg ttgttgcgca
    26581 gtacggtttt cttgtctgct ggcagctggt ccagtttggt gatcagctct tcaaccggca
    26641 ggttggcaaa ttctggcagg ctttccagcg ccgcgttggc gttgtttacg taggtctgat
    26701 ggtgtttggt gtggtggatt tccatggtct gcttatcgaa gtgcggttcc agggcatcgt
    26761 aagcatacgg cagggatggc agggtatagc tcatattcat ctccagtatt gtcgggcggc
    26821 cgattgttaa tgccgcgtaa gcagttggtt cattatagtt aattaaatga tattgaaaat
    26881 gattatcaat gccgtacttt tcgtaagggt atggttttgc aggaaaatgc ccgagatgtg
    26941 aagcaaatca cccacttaat gccgtgattg ccagtaaatc gacaacggcg gcaacaggcg
    27001 aaaggttaat cgacagcacg atttttacac tcatctcgtc ggagatgtga agcgacgaaa
    27061 aatgatgagg ataagaagat gagtaacgcg attacgatgg ggatattttg gcatttgatc
    27121 ggcgcggcca gtgcagcctg tttttacgct ccgttcaaaa aagtaaaaaa atggtcatgg
    27181 gaaaccatgt ggtcagtcgg tgggattgtt tcgtggatta ttctgccgtg ggccatcagc
    27241 gccctgttac taccgaattt ctgggcgtat tacagctcgt ttagtctctc tacgctgctg
    27301 cctgtttttc tgttcggcgc tatgtggggg atcggtaata tcaactatgg cctgaccatg
    27361 cgttatctcg gcatgtcgat gggaattggc atcgccattg gcattacgtt gattgtcggt
    27421 acgctgatga cgccaattat caacggcaat ttcgatgtgc tgattaacac cgaaggcgga
    27481 cgcatgacgt tgctcggcgt tctggtggcg ctgattggcg tagggattgt aactcgagcc
    27541 gggcagttga aagagcgcaa gatgggcatt aaagccgaag agttcaatct gaaaaaaggg
    27601 ctggtgctgg cggtgatgtg cggcattttc tctgccggga tgtcctttgc gatgaacgcc
    27661 gcaaaaccga tgcatgaagc cgctgccgca ctaggcgtcg atccactgta tgtcgctctg
    27721 ccaagctatg tcatcatcat gggcggcggc gcgatcatca acctcggttt ctgttttatt
    27781 cgtctggcaa aagtgaagga tttgtcgcta aaagccgact tctcgctggc aaaaccgctg
    27841 atcactcaca atgtgttact ctcagcactg ggcgggttga tgtggtatct gcaattcttt
    27901 ttctatgcct ggggccacgc ccgcattccg gcgcaatatg actacatcag ttggatgctg
    27961 catatgagct tctatgtatt gtgcggcggt atcgtcgggc tggtgctgaa agagtggaac
    28021 aatgcaggac gccgtccggt aacggtgttg agcctcggtt gtgtggtgat tattgtcgcc
    28081 gctaacatcg tcggcatcgg catggcgaat taatctttct gcgaattgag atgacgccac
    28141 tggctgggcg tcatcccggt ttcccgggta aacaccaccg aaaaatagtt actatcttca
    28201 aagccacatt cggtcgaaat atcactgatt aacaggcggc tatgctggag aagatattgc
    28261 gcatgacaca ctctgacctg tcgcagatat tgattgatgg tcattccagt ctgctggcga
    28321 aattgctgac gcaaaacgcg ctcactgcac gatgcctcat cacaaaattt atccagcgca
    28381 aagggacttt tcaggctagc cgccagccgg gtaatcagct tatccagcaa cgtttcgctg
    28441 gatgttggcg gcaacgaatc actggtgtaa cgatggcgat tcagcaacat caccaactgc
    28501 ccgaacagca actcagccat ttcgttagca aacggcacat gctgactact ttcatgctca
    28561 agctgaccga taacctgccg cgcctgcgcc atccccacgc tacctaagcg ccagtgtggt
    28621 tgccctgcgc tggcgctaaa tcccggaatc gccccctgcc agtcaagatt cagcttcaga
    28681 cgctccgggc aataaataat attctgcaaa accagatcgt taacggaagc gtaggagtgt
    28741 ttatcgtcag catgaatgta aaagagatcg ccacgggtaa tgcgataagg gcgatcgttg
    28801 agtacatgca ggccattacc gcgccagaca atcaccagct cacaaaaatc atgtgtatgt
    28861 tcagcaaaga catcttgcgg ataacggtca gccacagcga ctgcctgctg gtcgctggca
    28921 aaaaaatcat ctttgagaag ttttaactga tgcgccaccg tggctacctc ggccagagaa
    28981 cgaagttgat tattcgcaat atggcgtaca aatacgttga gaagattcgc gttattgcag
    29041 aaaaccatcc cgtccctgac gaatatcacg cggtgaccag ttaaactctc ggcgaaaaag
    29101 cgtcgaaaag tggttactgt cgctgaatcc acagcgatag gcgatgtcag taacgctggc
    29161 ctcgctgtgg cgtagcagat gtcgggcttt catcagtcgc aggcggttca ggtatcgctg
    29221 aggcgtcagt cccgtttgct gcttaagctg ccgatgtagc gtacgcagtg aaagagaaaa
    29281 ttgatccgcc acggcatccc aattcacctc atcggcaaaa tggtcctcca gccaggccag
    29341 aagcaagttg agacgtgatg cgctgttttc caggttctcc tgcaaactgc ttttacgcag
    29401 caagagcagt aattgcataa acaagatctc gcgactggcg gtcgagggta aatcattttc
    29461 cccttcctgc tgttccatct gtgcaaccag ctgtcgcacc tgctgcaata cgctgtggtt
    29521 aacgcgccag tgagacggat actgcccatc cagctcttgt ggcagcaact gattcagccc
    29581 ggcgagaaac tgaaatcgat ccggcgagcg atacagcaca ttggtcagac acagattatc
    29641 ggtatgttca tacagatgcc gatcatgatc gcgtacgaaa cagaccgtgc caccggtgat
    29701 ggtatagggc tgcccattaa acacatgaat acccgtgcca tgttcgacaa tcacaatttc
    29761 atgaaaatca tgatgatgtt caggaaaatc cgcctgcggg agccggggtt ctatcgccac
    29821 ggacgcgtta ccagacggaa aaaaatccac actatgtaat acggtcatac tggcctcctg
    29881 atgtcgtcaa cacggcgaaa tagtaatcac gaggtcaggt tcttacctta aattttcgac
    29941 gggaaaccac gtaaaaaacg tcgatttttc aagatacagc atgaattttc aggaaatgcg
    30001 gtgagcatca caccaccaca attcagcaat ttgtgaacat catcacgttc atctttccct
    30061 ggttgccaat ggcccatttt cctgtcagta gcgagaaggt cgcgaattca ggcgcttttt
    30121 agactggtcg taatgaaatt cagcaggatc acattatgac ctttcgcaat tgtgtcgccg
    30181 tcgatctcgg cgcatccagt gggcgcgtga tgctggcgcg ttaccagcgt gaatgccgca
    30241 gcctgacgct gcgcgaaatc catcgtttta aaaatgggct gcatagccag aacggttatg
    30301 tcacctggaa tgtggatagc ctggaaagtg ccattcgcct tggattaaac aaggtgtgcg
    30361 aggaagggat tcgtatcgat agcattggga ttgatacctg gggcgtggac tttgtgctgc
    30421 tcgaccaaca gggtcagcgt gtgggcctgc ccgttgctta tcgcgatagc cgctccaatg
    30481 gcctaatggc gcaggcacag caacaactcg gcaaacgcga tatttatcaa cgtagcggca
    30541 tccagtttct gcccttcaat acgctttatc aactgcgtgc gctgacggag caacaacctg
    30601 aacttattcc acacattgct cacgctctgc tgatgccgga ttacttcagc tatcgcctga
    30661 ccggcaagat gaactgggag tacaccaatg ccaccaccac acaactggtc aatatcaata
    30721 gcgacgactg ggacgagtcg ctactggcgt ggagcggggc caacaaagcc tggtttggtc
    30781 gcccgacgca tccgggtaat gtcattgggc actggatttg cccgcagggt aatgagattc
    30841 cggtggtcgc cgttgccagc catgataccg ccagcgcggt tatcgcctcg ccgttaaacg
    30901 gttcacgcgc cgcttatctc tcttctggca cctggtcatt gatgggcttc gaaagccaga
    30961 cgccatttac caatgacacg gcgctggcag ccaacatcac caatgaaggc ggggcggaag
    31021 gtcgctatcg ggtgctgaaa aatattatgg gcttatggct gcttcagcga gtgcttcagg
    31081 aacggcaaat caacgatctc ccggcgctta tcgccgcgac acaggcactt ccggcctgtc
    31141 gcttcatcat caatcccaat gacgatcgct ttattaatcc tgaagcgatg tgcagcgaaa
    31201 ttcaggctgc gtgtcgggaa acggcgcaac cgatcccgga aagtgatgct gaactggcgc
    31261 gctgtatttt cgacagtctg gcgctgctgt atgccgatgt gttgcatgag ctggcgcagc
    31321 tgcgcggtga agatttctcg caactgcata ttgtcggcgg cggctgccag aacacgctgc
    31381 tcaaccagct atgcgccgat gcctgcggta ttcgggtgat cgccgggcct gttgaagcct
    31441 caacgctcgg caatatcggc atccagttaa tgacgctgga tgaactcaac aatgtggatg
    31501 atttccgtca ggtcgtcagc accaccgcga atctgaccac ctttacccct aatcctgaca
    31561 gtgaaattgc ccactatgtg gcgcagattc actctacacg acagacaaag gagctttgcg
    31621 catgaccact caactggaac aggcctggga gctggcgaaa cagcgtttcg cggcggtggg
    31681 gattgatgtc gaggaggcgc tgcgccaact tgatcgttta cccgtttcaa tgcactgctg
    31741 gcagggcgat gatgtttccg gttttgaaaa cccggaaggt tcgctgaccg gtgggattca
    31801 agctactggt aattatccgg gcaaagcgcg taatgccagt gagctacgta ccgatctgga
    31861 acaggctatg cggctgattc cggggccgaa acggcttaat ttacatgcca tctatctgga
    31921 atcagatacg ccagtctcgc gcgatcagat caaaccagag cacttcaaaa actgggttga
    31981 atgggcgaaa gccaatcagc tcggtctgga ttttaacccc tcctgctttt cgcatccgct
    32041 aagcgccgat ggctttacgc tttcccatgc cgacgacagc attcgccagt tctggattga
    32101 tcactgcaaa gccagccgtc gcgtttcggc ctattttggc gagcaactcg gcacaccatc
    32161 ggtgatgaac atctggatcc cggatggtat gaaagatatc accgttgacc gtctcgcccc
    32221 gcgtcagcgt ctgctggcag cactggatga ggtgatcagc gagaagctaa accctgcgca
    32281 ccatatcgac gccgttgaga gcaaattgtt tggcattggc gcagagagct acacggttgg
    32341 ctccaatgag ttttacatgg ggtatgccac cagccgccag actgcgctgt gcctggacgc
    32401 cgggcacttc cacccgactg aagtgatttc cgacaagatt tccgccgcca tgctgtatgt
    32461 gccgcagttg ctgctgcacg tcagccgtcc ggttcgctgg gacagcgatc acgtagtgct
    32521 gctggatgat gaaacccagg caattgccag tgagattgtg cgtcacgatc tgtttgaccg
    32581 ggtgcatatc ggccttgact tcttcgatgc ctctatcaac cgcattgccg cgtgggtcat
    32641 tggtacacgc aatatgaaaa aagccctgct gcgtgcgttg ctggaaccta ccgccgagct
    32701 gcgcaagttg gaagcggcgg gcgattacac tgcgcgtctg gcactgctgg aagagcagaa
    32761 atcgttgccg tggcaggcgg tctgggaaat gtattgccaa cgtcacgata ccccaacggg
    32821 tagcgaatgg ctggagagcg tgcgggctta tgagaaagcg attttgagcc agcgtgggta
    32881 aacactgccg gatgcggcac gagcgcctta tccggcctac gggtcgaatg tccatgcggg
    32941 ctgtcaccct caccccggcc ctctccctga aagggcgagg gagaaaaaca tagcctcgtg
    33001 cggcaacgga gctgaacact gctccggaca gtcccctcgc ccctacgggg agagggttag
    33061 ggtgagggga acaagccgca ccatgtctaa acaaggcaac ctaatttaca ggaacacaga
    33121 acatgcaaaa cattacccag tcctggtttg tccagggaat gatcaaagcc accaccgatg
    33181 cctggctgaa aggctgggac gagcgcaacg gcggcaacct gacgctgcgc ctggatgacg
    33241 ccgatatcgc gccttataaa gacaacttcc atgcacaacc gcgctatatc ccgctcagcc
    33301 agcccatgcc tttactggca aatacaccgt ttattgtcac cggctccggc aaattcttcc
    33361 gtaacgtcca gcttgatcct gcagctaact taggcgtcgt aaaagtcgac agcgacggcg
    33421 cgggctacca tattctctgg gggttaacca acgaagccgt tccaacttct gaacttccgg
    33481 ctcactttct ctcccactgc gagcgcatta aagccaccaa cggtaaagat cgggtgatca
    33541 tgcactgcca cgccaccaac ctgatcgccc tcacctatgt actggaaaac gacaccgcgg
    33601 tctttactcg ccaactgtgg gaaggcagca ccgagtgtct ggtggtattc ccggatggcg
    33661 ttggcattct gccgtggatg gtgcccggca cggacgaaat cggccaggcg accgcacaag
    33721 agatgcaaaa acattcgctg gtgttgtggc ccttccacgg cgtcttcggc agcgggtcga
    33781 cgttggatga aacattcggt ttaatcgaca ccgcagaaaa atcagcacaa gtattagtga
    33841 aggtttattc gatgggcggc atgaaacaga ccatcagccg tgaagagttg atagcgctcg
    33901 gcaagcgctt cggcgttaca ccactagcca gtgcgctggc gctgtaagga gcaaacatga
    33961 tccgcaaagc ctttgtcatg caggttaacc ccgacgctca cgaagagtat cagcgtcggc
    34021 ataaccccat ctggccggaa ctggcagcag tgttgaaatc tcacggtgcg cataactacg
    34081 ccatttacct cgacaaagcg cgtaatctgc tgtttgccac ggtagagatt gaatctgaag
    34141 agcgctggaa tgcggttgcc agtactgatg tttgccaacg ttggtggaaa tatatgaccg
    34201 acgtcatgcc cgcgaacccg gataacagcc cggtgagtag cgaactgcaa gaagtgtttt
    34261 acctgccgta attgcctaat gtgccggaga cgcctccggc acaatatttt taatttcgat
    34321 ttgaaaaata aacatattac acct
//
LOCUS       DAPGWB010000032        34220 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.032, whole genome shotgun sequence.
ACCESSION   DAPGWB010000032 DAPGWB010000000
VERSION     DAPGWB010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 34220)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34220)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34220
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.032"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            77..238
                     /locus_tag="RHX79_001527"
     CDS             77..238
                     /locus_tag="RHX79_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000395868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196720.1"
                     /translation="MEFSFSPKLLVVAVAAALPLMASAADTPSTATARKGFAGYDHPN
                     QYPQNAAIY"
     gene            complement(322..1557)
                     /locus_tag="RHX79_001528"
     CDS             complement(322..1557)
                     /locus_tag="RHX79_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HDV2196721.1"
                     /translation="MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTH
                     MDDDTLEAYVRHYIAASEPQNEVAFTWQGGEPTLLGLEFYRRAVKLQAKYGAGRKISN
                     SFQTNGVLLDDKWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLL
                     QKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETAASDGLKLH
                     APGDIQGELTEWSVRPDEFGEFLVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVC
                     HHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQ
                     LPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLL
                     AHGRPASDIMQAHLLVVNK"
     gene            complement(1704..1780)
                     /locus_tag="RHX79_001529"
     tRNA            complement(1704..1780)
                     /locus_tag="RHX79_001529"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1744..1746),aa:Pro,seq:tgg)
     gene            complement(1823..1909)
                     /locus_tag="RHX79_001530"
     tRNA            complement(1823..1909)
                     /locus_tag="RHX79_001530"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1873..1875),aa:Leu,seq:cag)
     gene            complement(1930..2005)
                     /locus_tag="RHX79_001531"
     tRNA            complement(1930..2005)
                     /locus_tag="RHX79_001531"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1970..1972),aa:His,seq:gtg)
     gene            complement(2064..2140)
                     /locus_tag="RHX79_001532"
     tRNA            complement(2064..2140)
                     /locus_tag="RHX79_001532"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2104..2106),aa:Arg,seq:ccg)
     gene            complement(2243..3628)
                     /locus_tag="RHX79_001533"
     CDS             complement(2243..3628)
                     /locus_tag="RHX79_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDV2196722.1"
                     /translation="MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS
                     VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMA
                     VGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT
                     IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVEL
                     IGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFA
                     KIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVA
                     GVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAA
                     IASHPFRSILFPWANYVTMAFLICVLIGMYFNEDTRMSLFVGIIFMLAVTAIYKVFGL
                     NRHGKAHKLEE"
     gene            complement(3819..4559)
                     /gene="rffM"
                     /locus_tag="RHX79_001534"
     CDS             complement(3819..4559)
                     /gene="rffM"
                     /locus_tag="RHX79_001534"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HDV2196723.1"
                     /translation="MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAI
                     NAEKMLTIEDNAEVRELINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMA
                     RAGKEGTPVFLVGGKPEVLAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASG
                     AQIVTVAMGSPKQEIFMRDCRLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWL
                     YRLLSQPSRIKRQLRLLRYLRWHYTGNL"
     gene            complement(4562..5914)
                     /gene="wzyE"
                     /locus_tag="RHX79_001535"
     CDS             complement(4562..5914)
                     /gene="wzyE"
                     /locus_tag="RHX79_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA oligosaccharide polymerase"
                     /protein_id="HDV2196724.1"
                     /translation="MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFL
                     LTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADVPR
                     RPLFTMNRVETDLTWVILMGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKR
                     FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIG
                     IIRGWISLWMLAAAGVLGIVGMFWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLA
                     LLLQNYDNIDFQGLAPIVRDFYVFIPSWLWPGRPSMVLNSANYFTWEVLNNHSGLAIS
                     PTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNRETNRYKAAILHSFCFGAIF
                     NMIVLAREGLDSFVSRVVFFIVVFGACLMIAKLLYWLFESAGLIHKRTKSSLRTQVEG
                     "
     gene            complement(5911..6990)
                     /gene="rffT"
                     /locus_tag="RHX79_001536"
                     /gene_synonym="wecF"
     CDS             complement(5911..6990)
                     /gene="rffT"
                     /locus_tag="RHX79_001536"
                     /gene_synonym="wecF"
                     /EC_number="2.4.1.325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HDV2196725.1"
                     /translation="MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDD
                     GLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPS
                     QFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGEL
                     LYFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNDHIAALCAVHQQFGDTVKVVVP
                     MGYPPNNEAYIEEVRQAGLELFSEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQG
                     IGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKN
                     TIAFFSPNYLQGWQRALAIAAGEVA"
     gene            complement(6987..8237)
                     /gene="wzxE"
                     /locus_tag="RHX79_001537"
     CDS             complement(6987..8237)
                     /gene="wzxE"
                     /locus_tag="RHX79_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid III flippase WzxE"
                     /protein_id="HDV2196726.1"
                     /translation="MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFR
                     QLITVLGVLAGAGIFNGVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAA
                     APISQGLFGNTDYQGLVRLVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGV
                     LAYYVSYRLGGYEGALLGLALIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLS
                     KFTLMALITSVTLPVAYIMMRKLLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYL
                     LPTLSRLTEKRDITREVVKSLKFVLPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLF
                     AWQLVGDVLKVGAYVFGYLVIAKATLRFYILAEISQFTLLMVFAHWLIPAHGALGAAQ
                     AYMATYIVYFSLCCGVFLLWRRRA"
     gene            complement(8239..9369)
                     /gene="rffA"
                     /locus_tag="RHX79_001538"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
     CDS             complement(8239..9369)
                     /gene="rffA"
                     /locus_tag="RHX79_001538"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /EC_number="2.6.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
                     /protein_id="HDV2196727.1"
                     /translation="MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRF
                     GSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRP
                     DTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMST
                     YKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFR
                     GQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGR
                     IELPSIPDGCVQNAHMFYIKLRDIDDRSALINFLKEAEIMAVFHYIPLHGCPAGERFG
                     EFHGEDRYTTKESERLLRLPLFYNLSPVNQRTVIATLLNYFS"
     gene            complement(9374..10048)
                     /gene="rffC"
                     /locus_tag="RHX79_001539"
                     /gene_synonym="wecD"
     CDS             complement(9374..10048)
                     /gene="rffC"
                     /locus_tag="RHX79_001539"
                     /gene_synonym="wecD"
                     /EC_number="2.3.1.210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxy-D-galactose
                     acyltransferase"
                     /protein_id="HDV2196728.1"
                     /translation="MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDVLAPWSRV
                     QAKIAASNTGELDALQQLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASA
                     AFAQSRFRAPWYAPDASRRFYAQWIENAVRGTFDHQCLILRAASGGIRGYVSLRELNA
                     TDARIGLLAGRGVGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVEST
                     AYWLYR"
     gene            complement(10026..10907)
                     /gene="rfbA"
                     /locus_tag="RHX79_001540"
     CDS             complement(10026..10907)
                     /gene="rfbA"
                     /locus_tag="RHX79_001540"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HDV2196729.1"
                     /translation="MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLA
                     GIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNGEPS
                     CLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISLEEK
                     PKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRG
                     FAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKT
                     GYGQYLLELLRARPRQY"
     gene            complement(10926..11993)
                     /gene="rffG"
                     /locus_tag="RHX79_001541"
     CDS             complement(10926..11993)
                     /gene="rffG"
                     /locus_tag="RHX79_001541"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HDV2196730.1"
                     /translation="MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL
                     APVAQSEHFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYG
                     NGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPN
                     KPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN
                     ESWWKQVQDGSYQGERLGLKG"
     gene            complement(11993..13255)
                     /gene="wecC"
                     /locus_tag="RHX79_001542"
     CDS             complement(11993..13255)
                     /gene="wecC"
                     /locus_tag="RHX79_001542"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDV2196731.1"
                     /translation="MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR
                     GEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAA
                     RSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPER
                     VLPGQVMVELIKNDRVIGGMTPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSF
                     RDVNIAFANELSLICADQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVA
                     QNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNI
                     DDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVM
                     LVDHSQFKVINGDNVHQQYVVDAKGVWR"
     gene            complement(13252..14382)
                     /gene="wecB"
                     /locus_tag="RHX79_001543"
     CDS             complement(13252..14382)
                     /gene="wecB"
                     /locus_tag="RHX79_001543"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HDV2196732.1"
                     /translation="MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLD
                     QVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLAT
                     SLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN
                     VADSRIFITGNTVIDALLWVRDQVMSSDTLRSELAANYPFIDPDKKMILVTGHRRESF
                     GRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPF
                     VWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVE
                     EVTRLLIDENEYQAMSRAHNPYGDGQACSRILEALKNNRISL"
     gene            complement(14438..15484)
                     /gene="wzzE"
                     /locus_tag="RHX79_001544"
     CDS             complement(14438..15484)
                     /gene="wzzE"
                     /locus_tag="RHX79_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA polysaccharide chain length modulation
                     protein"
                     /protein_id="HDV2196733.1"
                     /translation="MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIA
                     LAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYK
                     EFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS
                     VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA
                     IYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP
                     AFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGG
                     LIGAGVALTRRCSK"
     gene            complement(15496..16599)
                     /gene="wecA"
                     /locus_tag="RHX79_001545"
     CDS             complement(15496..16599)
                     /gene="wecA"
                     /locus_tag="RHX79_001545"
                     /EC_number="2.7.8.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HDV2196734.1"
                     /translation="MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQ
                     GLIPLVGGISVYAGICFTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRAT
                     IQAAVGIVMMVFGKLYLSSLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDG
                     LLGGLSCVSFAAIGMILWFDGQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDA
                     GSTLIGFTVIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPD
                     RQHIHHLIMRAGFTSRQAFVLITLAAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLY
                     GYCIKRAWKVARFIKRVKRRLRRNRGGSPNLTK"
     gene            complement(16839..18098)
                     /gene="rho"
                     /locus_tag="RHX79_001546"
     CDS             complement(16839..18098)
                     /gene="rho"
                     /locus_tag="RHX79_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDV2196735.1"
                     /translation="MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAK
                     SGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIR
                     PPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTAR
                     VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTE
                     MQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
                     VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE
                     FKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGE
                     IDAMEFLINKLAMTKTNDDFFEMMKRS"
     gene            complement(18183..18284)
                     /gene="rhoL"
                     /locus_tag="RHX79_001547"
     CDS             complement(18183..18284)
                     /gene="rhoL"
                     /locus_tag="RHX79_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rho operon leader peptide RhoL"
                     /protein_id="HDV2196736.1"
                     /translation="MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR"
     gene            complement(18425..18754)
                     /gene="trxA"
                     /locus_tag="RHX79_001548"
     CDS             complement(18425..18754)
                     /gene="trxA"
                     /locus_tag="RHX79_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017375425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HDV2196737.1"
                     /translation="MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILD
                     EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKE
                     FLDANLA"
     gene            18885..20150
                     /gene="rhlB"
                     /locus_tag="RHX79_001549"
     CDS             18885..20150
                     /gene="rhlB"
                     /locus_tag="RHX79_001549"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HDV2196738.1"
                     /translation="MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTL
                     AGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHA
                     DAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ
                     VVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEY
                     IEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHL
                     AADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLP
                     DDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTD
                     LPKPLRLTRPRTGNGPRRTGAPRNRRRSG"
     gene            20284..21768
                     /gene="gppA"
                     /locus_tag="RHX79_001550"
     CDS             20284..21768
                     /gene="gppA"
                     /locus_tag="RHX79_001550"
                     /EC_number="3.6.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanosine-5'-triphosphate,3'-diphosphate
                     diphosphatase"
                     /protein_id="HDV2196739.1"
                     /translation="MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAA
                     GLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQE
                     ILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSL
                     SMGCVTWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQAL
                     QEIMMAQGMDERITLEKLQQLKQRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIF
                     TELNIQCMTLAGGALREGLVYGMLHLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVA
                     ANFFDQVEKEWHLEAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPA
                     QKKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAIIFASRRRDDLVPEMT
                     LQANHELLTLTLPQGWLTQHPLGKEIIAQESQWQSYVHWPLEVH"
     gene            complement(21815..23836)
                     /gene="rep"
                     /locus_tag="RHX79_001551"
     CDS             complement(21815..23836)
                     /gene="rep"
                     /locus_tag="RHX79_001551"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HDV2196740.1"
                     /translation="MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCG
                     YQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMK
                     ANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGER
                     DRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQD
                     TNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQN
                     YRSSGRILKAANILIANNPHVFEKRLFSELGYGTELKVLSANNEEHEAERVTGELIAH
                     HFVNKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRV
                     LTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGY
                     EALTRFTHWLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQL
                     FSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFP
                     YVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRP
                     EPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRGK"
     gene            24053..24502
                     /locus_tag="RHX79_001552"
     CDS             24053..24502
                     /locus_tag="RHX79_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDV2196741.1"
                     /translation="MAINFSPKVGEILECNFGNYPVSQNGQFSTKYYDGRIPPEMIKN
                     RLVVVLNGKINGNACIVVPLSTTRDHDKLNRGMHVEIASNVINGLQFFDQQIRWAKAD
                     LVQQVSRNRLNRARTYRGYLNQCLPHELVADIQRAVIKSINAISLIN"
     gene            24701..24982
                     /gene="ppiC"
                     /locus_tag="RHX79_001553"
     CDS             24701..24982
                     /gene="ppiC"
                     /locus_tag="RHX79_001553"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004097481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PpiC"
                     /protein_id="HDV2196742.1"
                     /translation="MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSG
                     KRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN"
     gene            complement(25069..26544)
                     /gene="ilvC"
                     /locus_tag="RHX79_001554"
     CDS             complement(25069..26544)
                     /gene="ilvC"
                     /locus_tag="RHX79_001554"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDV2196743.1"
                     /translation="MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVG
                     CGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLV
                     VNLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDR
                     LSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREET
                     GKTAFETAPQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLH
                     ELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIPE
                     GAVDNAQLRDVNEAIRCHAIEQVGKKLRGYMTDMKRIAVAG"
     gene            26694..27584
                     /gene="ilvY"
                     /locus_tag="RHX79_001555"
     CDS             26694..27584
                     /gene="ilvY"
                     /locus_tag="RHX79_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HDV2196744.1"
                     /translation="MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEDDLG
                     QALFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAA
                     YSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSM
                     LENLAVVLIAPALPCPVRNQVSVEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPM
                     IYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCA
                     QKKRLHEPLIEAFWKILPNH"
     gene            complement(27581..29125)
                     /gene="ilvA"
                     /locus_tag="RHX79_001556"
     CDS             complement(27581..29125)
                     /gene="ilvA"
                     /locus_tag="RHX79_001556"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HDV2196745.1"
                     /translation="MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRL
                     DNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLG
                     VKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHP
                     MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSA
                     CLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKD
                     LFEDVRAVAEPSGALALAGMKKYIAQHNIRGERLAHILSGANVNFHGLRYVSERCELG
                     EQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEER
                     KEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRF
                     LNTLGTHWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRLNELGYDCHDETNNPAF
                     RFFLAG"
     gene            complement(29128..30978)
                     /gene="ilvD"
                     /locus_tag="RHX79_001557"
     CDS             complement(29128..30978)
                     /gene="ilvD"
                     /locus_tag="RHX79_001557"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDV2196746.1"
                     /translation="MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFT
                     QFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQII
                     KLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGN
                     GSLLATHADRKQLFLNAGKRIVELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMG
                     GSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIG
                     ILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLTQDDAVKNMFRAGPAGIRTTQAFS
                     QDCRWDSLDDDRANGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTG
                     PAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKAC
                     ALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELA
                     ARREAQEARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG"
     gene            complement(31043..31972)
                     /gene="ilvE"
                     /locus_tag="RHX79_001558"
     CDS             complement(31043..31972)
                     /gene="ilvE"
                     /locus_tag="RHX79_001558"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HDV2196747.1"
                     /translation="MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYD
                     SHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIF
                     VGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAK
                     AGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSAL
                     PGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEG
                     RCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ"
     gene            complement(31992..32255)
                     /gene="ilvM"
                     /locus_tag="RHX79_001559"
     CDS             complement(31992..32255)
                     /gene="ilvM"
                     /locus_tag="RHX79_001559"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HDV2196748.1"
                     /translation="MMQHQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQN
                     INIELTVASPRSVDLLFSQLNKLVDVAHVAICQSTTTSQQIRA"
     gene            complement(32252..33898)
                     /locus_tag="RHX79_001560"
     CDS             complement(32252..33898)
                     /locus_tag="RHX79_001560"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001012636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HDV2196749.1"
                     /translation="MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLC
                     RHEQGAAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAP
                     FIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVASSGRPGPVLVDIPKD
                     IQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALRE
                     FLATTKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDR
                     VTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALLPALQQPLNINDWQQHC
                     AQLRDEHSWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPE
                     NFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKI
                     VLLDNQRLGMVRQWQQLFFQERYSETTLTDNPDFLMLASAFGIPGQHITRKDQVEAAL
                     DTMLNSDGPYLLHVSIDELENVWPLVPPGASNSEMLEKLS"
     gene            complement(33901..33951)
                     /locus_tag="RHX79_001561"
     CDS             complement(33901..33951)
                     /locus_tag="RHX79_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196750.1"
                     /translation="MNNSTKFCFSRFRTGN"
     gene            complement(34038..34136)
                     /gene="ilvL"
                     /locus_tag="RHX79_001562"
     CDS             complement(34038..34136)
                     /gene="ilvL"
                     /locus_tag="RHX79_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilv operon leader peptide"
                     /protein_id="HDV2196751.1"
                     /translation="MTALLRVISLVVISVVVIIIPPCGAALGRGKA"
BASE COUNT         8285 a         9428 c         8655 g         7852 t
ORIGIN      
        1 tgtcagggag agggatctca attatcaatg cttaattacg tcatcatttt gatgacatga
       61 aaccggagca ttttgcatgg aattttcgtt ttcacccaaa cttcttgttg ttgctgtcgc
      121 cgccgctctt cctctcatgg ccagcgcagc agataccccg tcaactgcca ccgcacgcaa
      181 aggctttgcc ggatacgatc acccaaacca gtatccacag aacgctgcaa tttattgaat
      241 ttgcacgatc atgtaggccg gataaggcgt ttacgccgca tccggcaatc aaccgcaggc
      301 ggccacaaaa tggccgcttt tttacttatt caccaccagc aaatgtgcct gcataatgtc
      361 actggccggg cgaccgtgcg ccagcaaatc agccattgct ttaagatatg gcggtagatg
      421 gcggaaataa cgctgatacc cggcacacaa ataattcagc cccggtttgc cgctggcatc
      481 gagcatgaag cggtgtttcg ggcagcctcc ccagcacgct tttaacacgt tacaactgcg
      541 acactgcgcc ggtaattgct taaatttatc ttcaccaaac acctgctgtt gcggggaatc
      601 gatcatttct gcaattgttt gctgatgcat attccccagc cgatattgcg gataaacata
      661 gtgatcgcag gcgtaaacgt cgccgttgtg ctcaacaatc accgagcgcc cacaggttgg
      721 ctgatgatgg caaaccgcac ccggcgcacc gacaaaattg gcaaacgccc attcgatatt
      781 catcacgaaa atcttgccga cgtcgcgttt gatccagtgg tcgaatatcg ccaccagaaa
      841 ttcaccaaat tcatcggggc gcaccgacca ttccgtcagt tccccctgaa tatcaccagg
      901 cgcatgtagt ttcagtccat cgctggcagc tgtttcatca gccaggcgct cgaccaccgg
      961 aataaactgg atgaattcga ctcccgcatc gcacaaaaaa tcataaacct gcaacggttg
     1021 ctgcgcgctg gtgcggttga cgcagaccag cacgttatag tcgacatgat gtttttgcag
     1081 cagcgtcagg gcacgcatca ccagcttatg cgttggtctg ccacctttgg tcacgcgata
     1141 ttgattgtgg atctcagccg gaccgtccag cgataaccca acaagaaaat gattttctgc
     1201 cagaaatgca caccatttat catcgagcag cacgccgtta gtctggaagc tgttacttat
     1261 cttcctgcca gcaccgtatt tcgcctgtaa ctttacggca cggcggtaaa actccagccc
     1321 gagtaacgtt ggttcgccgc cctgccaggt aaaagccact tcgttttgcg gttcgctggc
     1381 agcgatatag tgacggacat acgcttccag cgtgtcatcg tccatatgcg tgactggctt
     1441 ttcgcggtaa agggattgtt tttcgagata aaaacagtag tcacagttca gattacaatc
     1501 ggaaccactc ggtttcgcca tcacatgaaa agcacgcgtt ggaacctgtt gcagcatggt
     1561 cactccttgc ctgaagtcat ccttcaatac gttaagggcg aaatcatacc gtggggcaat
     1621 gagttattac gggcgtttat tgcgaaggga gggtgacgaa atgcacagaa aacaaaaaac
     1681 cccgccgaag cggggttcaa aattggtcgg cgagagagga ttcgaacctc cgacccactg
     1741 gtcccaaacc agttgcgcta ccaagctgcg ctactcgccg aaatactgct ttttgaattt
     1801 ttagttcaat tctttaaagt cgtggtgcga ggggggggac ttgaaccccc acgtccgtaa
     1861 ggacactaac acctgaagct agcgcgtcta ccaattccgc caccttcgca ttgtcacaac
     1921 ttctaataat ggggtggcta atgggattcg aacccacgac aactggaatc acaatccagg
     1981 gctctaccaa ctgagctata gccaccacta caaatcttgt tacgcggtat tactaccacc
     2041 gcagctcaag cgccgggact aaatggcgcg cccgacagga ttcgaacctg agacctctgc
     2101 ctccggaggg cagcgctcta tccagctgag ctacgggcgc ttagcgccgt tgcgggggtg
     2161 gataatacgg acttcccacc cctctgtcta gtcccttttt aaataaattg cgcgtttggt
     2221 tacggtttgt gcgttttgct gcttattcct ccagtttatg cgctttcccg tggcgattaa
     2281 ggccaaaaac tttataaatc gccgtcaccg ccagcataaa gatgatgcca acaaacagcg
     2341 acatacgcgt atcttcatta aagtacatgc cgatcaaaac gcaaatcagg aatgccattg
     2401 ttacgtagtt ggcccacggg aacaggattg agcggaacgg atggctggca atcgccgctt
     2461 tatgtgcacg ccgaaaacgc agctggctta tcaatatcac aaaccatggc accatccccg
     2521 gaagcacgct ggcactgtag acgtagacaa acacacgctg cggattggga atgatgtagt
     2581 tcaggcatga gccaattagc agaatagcaa tagatactgc cacacccgca acgggtacgc
     2641 cgtgacggga aactttcgcc atcgccgccg gtaactgacg gtttttcgcc agtgcgtaga
     2701 gcatacgtcc gcaactgtac atgccgctgt tacagccaga gagcgcagcc gtcagcacca
     2761 caaagttgat aatgcccgcc gctgcggtaa taccgatttt ggcaaaagtc agtacgaacg
     2821 ggctgccgtt gctgcctatt tcattccacg ggaagatggt gacgataacg aaaatcgcgc
     2881 ctacgtagaa aatcaggatc cgccacagca ccttgcctac ggcactgcgc agcgtcacct
     2941 gcggattctt cgcttcaccg gcagtaatgc caatcagctc cacgccctgg taggacgcca
     3001 ccacaataca cagcgcggtc aggaaccctt tccagccacc cgcaaagaaa ccgccatgct
     3061 ctgtgagatt gctaaaacca atcgactgcc cgccattgcc aaagccaaag aaaatcacgc
     3121 ccaggccaat gacaatcatc acgataatcg tggtgacttt gatcatcgcg aaccagaact
     3181 cgatttcgcc gtacaaccgc accgccgcca gattcgccaa cgccaccagc gccactgcga
     3241 tcaatgcggg tatccactgc gccatctccg ggaaccagaa ctggacataa acgccaatgg
     3301 cggtgatttc tgagatcccc accgccatcc acataaacca ataagaccag gcggtgagat
     3361 aaccaaagaa cgggctcata taacgatgcg cataaacggc gaacgaaccg gtaaccggtt
     3421 cgaggaacaa catttcgccc attgaacgca tgatgaaaaa gacgaatagc ccggcgatga
     3481 tataggccaa caatacggat ggcccggccc atttcaaggt actggcggcc cccataaaca
     3541 ggccgacgcc aatggtgccc cccagggcga tgagttcgat atgtcgagct tccagcccac
     3601 gctgtagctc tggtttgtta tctgccataa atcctcgtgt tgtgtttgca tgctttccgg
     3661 tgttaccggt tatcgttatg ggtacatcga gtgttgcgaa tgttttcgta attcaggaga
     3721 aatggcaaat aaagcattaa aaatttgaat gctttgtgta ataaaaaagc agacaggcga
     3781 cggagtgacc actccgtcgc tttacaaaga gaggaaaatc agaggttgcc ggtgtagtgc
     3841 cagcgtaaat aacgcagcaa acgaagctga cgcttaatgc ggctcggctg cgaaagcagg
     3901 cggtagagcc actccagtcc cagcgtttgc cagattttcg gtgcgcgttt tacgtgaccg
     3961 gtgaaaacat cgtaagtccc gccaacgccc atatacagcg catctggatg caccagacgg
     4021 cagtcgcgca tgaagatctc ctgctttggc gatcccatcg caacggtgac gatttgcgct
     4081 ccgctggcat gaatgcgttc aaacagcgcc tgacgctgct cgggtttaaa ataaccatcc
     4141 tgactgccaa cgatattcac attccattgg ttgcgcagtt tagcttcagt ttgcgccagc
     4201 acttcaggtt taccgcccac aagaaatacc ggcgtccctt ctttgcctgc gcgcgccatc
     4261 agctcttccc agagatcggc accggcaacg cgggaaacct gcgcctgcgg gtacttttta
     4321 cgtactgaac gtacaacgct gatgccatcc gcatatttaa attcggcagc gttaattaac
     4381 tccctgacct cggcgttatc ttcaatggtc agcatttttt cggcattaat ggcaaccagc
     4441 gttccctgct taagctgccc gtcagcaaac agataatcga gggcgtgctg catatcacgc
     4501 caaccaatca actgtaagcc acgcagcgta taggtcggtg ccgtggtgtt gttattcatt
     4561 gttatccttc aacctgcgtc cggagcgatg attttgtacg tttatgaatg agtccggcgc
     4621 tttcaaaaag ccagtacaac agttttgcga tcatcagaca tgcgccgaag accacgataa
     4681 aaaagactac gcgtgagaca aacgaatcca gcccttcacg tgccagcacg atcatattga
     4741 agatcgcccc aaagcagaaa ctgtgcaata tcgcagcctt atagcgatta gtctcgcggt
     4801 tgcccagctc atacagccag tcgaaccatt tgatgatcag tccaaccaca atcgccccga
     4861 gtgggatgaa caacgcgccg cccatcacca ccagtgagcc tataagcgta ggcgagatcg
     4921 ccagtccgga gtggttattc agcacttccc aggtaaagta gttggctgag ttcagcacca
     4981 tactcgggcg acccggccac agccaggaag ggataaagac atagaaatcg cggacaattg
     5041 gagccaggcc ctggaagtcg atgttgtcgt agttctgcaa cagcaacgcc agattctccc
     5101 atggcgagaa ggtgtcgcga gtgagataga gaaacgtata gaacgcttca tcgccgctca
     5161 cattcattcc atagcgtttt agcgccagcc agaacatgcc cacaatcccc agcacgcccg
     5221 ccgccgccag catccacaac gaaatccagc cgcgaataat gccaataaac aggaagatag
     5281 cgaatgcgat gatgatattg gcgcgagtgc cgccgacaat catataagtc agcaagccaa
     5341 aggcgaccgt gctgacgagg aaaaacagcc acgctttgct gtcctggcgc agaaagtaga
     5401 ccaccagcat cgccgggatg aaaaagtaaa agaagcgttt taacgccacg ccggagactt
     5461 cactggagaa gatctgactg taggagttaa gccggaacag caaaaagccg ttgtgcatga
     5521 agaagatgcc gacgcttacc agcgcgatgc ccatcaggat cacccacgta agatcggtct
     5581 ccacgcggtt catggtaaac agcggacggc gcggtacatc agcaacgcgt ttgcgtaggc
     5641 gggttttgta ggtgacatag taaaccgcgt agaagcagcc cgcagaaagc aacgcctgca
     5701 acaagatttc tggcggcgcg acaccaacat caaagcgaaa taccagcacg ctggtcagcg
     5761 ggaagccgaa gaaaaaggtg agcaaaaaca gcaatgaaaa gaagacattg aagttaaagc
     5821 gcacacggcg aaactcaaac caggtcagcg tggcaataaa cagcgtgcag agcagccaga
     5881 caacaaacag gccactgaat tgcagcagac tcatgcgacc tccccggcgg caatcgccaa
     5941 cgcccgctgc cagccttgta gatagttagg gctaaagaag gcaatggtgt ttttatccac
     6001 cgacgccaac tggcgctgcg cttcacgcac aatatcctcg ttgagatcgt cggtagtaaa
     6061 cagcaccggc aaatgctgtt ccgtcatatc ctgccagaac ggattttccc ggttaagcac
     6121 acaaggaatg cccgcctgaa tcagtaagca aagcgtacca atgccctgct ggcgggcaaa
     6181 aataaagtaa ccaagatcgc actgacgaag tagcgccaga taggcgtcaa attccagttt
     6241 ttcgctcaaa atttgcagat tttcttcgct gaataactcc agccccgcct gacgaacttc
     6301 ctcaatgtac gcttcgttat taggcggata tcccatcggc accaccactt ttaccgtatc
     6361 gccaaattgc tgatgaacgg cgcacaaggc agcaatatgg tcattgctgc ggtcaccgga
     6421 gttccccacc agaatggtca ttttcccttc acgttgccga tcgttcgcca tcgtattgag
     6481 agaagggtcc atccgcgtcg ggaagtacag cagttcgccc cgcacctttg gatgcgtttt
     6541 ggcaaaaaag ctcaaatcgc cgcgggtggc aaatacacag ccgactcgct tttgcgccag
     6601 gcgacgtagt gggtaaaaaa gcttatatct caagccactg gaaagctcat acaggtctgc
     6661 cccccagata tgccagaaaa actggctggg cttaatgcca ccactcagca gagccagcca
     6721 cagtgtggga ttgaactgac cgtggaagaa aaaacgctgc tgacggttag cttttgcttt
     6781 cgcgatgacc gcttccgcca gcgatttttt cccagggaaa aattgcacag aaagcgccgg
     6841 acagctatca cttaagccgt cgtccttgcc aacaaccata aactcgcgcg cgtgctcgct
     6901 cgtcgcagcc agcgcgtcat tgaaaaaccg caaaacggtt cggttatggt gagggatatc
     6961 cgatcccagt acgtgaatca gtacagtcat gcccgcctac gccagagtaa aaacacgcca
     7021 caacaaagag aaaaatagac gatataagtt gccatatatg cctgcgccgc gcccagtgca
     7081 ccatgcgcag ggattagcca gtgggcaaat accatcaata aagtgaactg gctgatttcc
     7141 gccagaatat aaaaccgcaa tgtcgctttg gcgatcacca gataaccaaa gacataagcg
     7201 cccactttta acacatcacc cactaactgc caggcaaaga gatcgcgcat agcggtaaat
     7261 ttattcgaca acagcagcca gatagcaaaa tcacgcagca gccagacggt aaaactcgcc
     7321 gccgccactg ccggtaagac gaatttcagc gatttaacca cttcccgggt gatatcgcgc
     7381 ttttccgtta gccgcgacaa cgtgggcagc aaatatacgc tgaacgatgc cgtaataaat
     7441 tgcaggtagg catcggaaat actgctcacc ccttgccaga tccccacttc atcccagcta
     7501 tactgcgccg cgagcagttt acgcatcatg atgtaagcaa caggcaaggt caccgacgta
     7561 atcaacgcca tgagcgtaaa tttgctcaac tgccctgcca gaccgttatc ccagctgggt
     7621 ttcagatagc ttaacgggat gacaccacgt ttgatcaaca tgatggcggc aggaattacc
     7681 accagcgcgg gaatcagcgc cagacccagc aacgcccctt cataaccgcc caaacggtaa
     7741 ctgacgtagt acgcgagaac gccaatcaag ctgccgacaa tcagcgataa cgcattacct
     7801 gcggcatcgc gaaagccttt catcagcgcc agtaacaggt tgccccaggc gatccccatt
     7861 tgcaccagcg ccactaaacg caccagcccc tgatagtcgg tattaccaaa caatccctgg
     7921 ctgattggcg cagctgccag cacaaaaacc agcgccatca gcgtagagaa accaagtacc
     7981 atcgctgatg aagtgccgac cacgcggcgc agctgttgcg gattatcatg gtactgggca
     8041 acgtatttgg ttacaccgtt aaagatgcca gctccggcaa gcacgccgag cacggtaatc
     8101 aactggcgga aatttgccgc cagcccaagc cccgccggac caaatgacac agccagcaac
     8161 ttaccgacca gtaacccggc accaatcttg accagtgtac tggccgccgt ccacaaggac
     8221 gcttttgcca acgacatatc aggagaagta gttcaacaaa gtcgcaatta ccgtacgctg
     8281 attgacgggc gacaggttgt agaacagcgg caggcgcagc aggcgctcgc tctctttggt
     8341 ggtgtagcga tcttcaccgt ggaactcacc aaagcgttcc cccgcagggc aaccgtgcag
     8401 cggaatgtaa tggaacaccg ccatgatttc cgcttctttc agaaagttaa tcaacgcgct
     8461 ccggtcatca atatcccgca gtttaatgta gaacatatgc gcgttctgca cgcagccatc
     8521 gggaatcgac ggcagctcga tacgcccggc tttcgccaga ggcgctaacg catcgtagta
     8581 gttttgccac agcgccagac gttgctggtt gatacgatcc gctgcttcca gttgcgccca
     8641 caggtacgca gcttgcagat cggacatcaa atagctggag ccaatatcgc gccaggtata
     8701 tttatcgacc tgaccacgga agaactggct gcggttagtg cccttttcac ggatgatctc
     8761 ggctcgttcg attaacgctt tatcgttaat cagcgtcgcg ccgccttcac cacccgccgt
     8821 atagtttttg gtttcatgga agctaaagca gccaatatga ccaatggttc ccagtgcacg
     8881 ccctttgtaa gtggacatca cgccctgagc ggcatcttct accacaaaca gattatgctt
     8941 tttcgccaac gccataatgg tgtccatttc gcaggccaca cccgcgtaat ggaccggcac
     9001 gataacgcgc gttttgtcgg tgatcgccgc ttcaatcagc gtttcgtcga tgttcatggt
     9061 gtccgggcga acatccacaa aaacgatttt tgcgccacgc agcacaaagg cattggcggt
     9121 ggagacaaag gtgtagctcg gcatgatcac ttcatcgcca ggctggatat cgagcagcag
     9181 cgccgccatc tccagcgaag cggtgcagga cggcgtcagt aacactttgg cgctgccaaa
     9241 acgttgctcc agccactgct ggcagcgacg ggtaaaaccg ccatcgccac acagtttgcc
     9301 gctacccatt gccgactgca tatagtcgag ttcggttccc accaccggcg gtgcgttaaa
     9361 tggaatcatg tgatcacctg tataaccagt acgcggtgct ttctacattc gcaccacttt
     9421 gtatgtatcg tttaagcgcg gcggtgttgc ccatttgggt cgccacccgc aaagttgttt
     9481 taccgcgagc atacgcccag tttagcgccg tttgcatcag ctcagcacct acaccgcgtc
     9541 cagccagcag gccaattcgc gcatctgtcg cattgagttc ccgtaaagag acataaccac
     9601 gaataccgcc ggacgccgca cgtaaaatca gacattgatg atcaaaggtg ccgcgcacgg
     9661 cattttcaat ccactgtgca taaaagcgtc tgctggcgtc aggcgcatac cacggcgcac
     9721 gaaaacggct ttgcgcaaat gcggcgctgg ctaactgacg taatgcggga atatcggtct
     9781 cttgtgccac tacagcacca ctatcactga cattgttcac gggtagtgcc aaatcaactt
     9841 caccttctac cagggagaat cccagctgtt gcagggcatc cagttcaccc gtatttgatg
     9901 ccgcaatttt ggcctgcacc cgtgaccacg gcgctaacac gtctggcgtc aggagcggtg
     9961 cttcagacgt aatgcgcacg atggcgctgt taacaccaaa gaaggcgttt tcccaggtta
    10021 gtggctcaat actggcgcgg acgggcacga agtaactcca gcagatattg gccgtagcca
    10081 gttttcgcta atgaactggc agcacgcttc acaccctcgt catcgagcca gccgttacgc
    10141 caggcgatct cttccaggca ggcaatctta aagccctggc gtttttctac tgtctgcaca
    10201 aaggtactgg cttcaatcag gctgtcgtga gtgccagtgt ccagccaggc aaatccgcgc
    10261 ccgagcagtt caacggtcag gttgcccgcc tcgaggtaca tctggttgat ggaggtaatc
    10321 tccagttcac cacgctccga cggcttcacc tgctttgcgt actccacgac tttactgtcg
    10381 tagaaataaa gcccggtcac cgcccagttt gacttcggct gttttggctt ttcttccagc
    10441 gagatagcgc ggaaattgtc gtcaaactcc accacgccaa agcgttccgg gtccatcacc
    10501 tgatagccaa ataccgtcgc cccttccgtg cgcgccgcaa catgacgcag cttcggactg
    10561 aagccctgac cgaagaagat gttatcgccc agcaccagac aagaaggttc accgttgagg
    10621 aaggtttcac cgatgataaa ggcctgcgcc agaccgtccg ggctgggctg ttcggcgtat
    10681 tccagctgga taccgaactc actaccatcg cccagcaggc gctggaaata acctttatct
    10741 tccggcgtag tgatgatgag aatttcgcgg ataccggcca acatcagcac cgacagcgga
    10801 tagtaaatca ttggcttatc gtaaatcggc aacagttgct tcgatacgcc gcgcgtaatc
    10861 ggatgcaatc gggtgccgga accgcccgcc aggataatac ctttcatgtt tgcctccgct
    10921 gaaaattagc ctttcagacc taaacgctcg ccctgatagc tgccgtcctg cacctgcttc
    10981 caccagcttt cattagccag ataccactgc accgttttac gcattccact ttcaaaggtt
    11041 tcctgtggca gccaaccaag ttcacgggca attttcgaag catcaatggc ataacgcaga
    11101 tcatgccccg gacggtcagc gacaaaggtg atcaagtcac gatagtgcgc cacgccgtgc
    11161 ggcttgttcg gagccagttc ttccagcagc tcgcaaatgg tttccacaac atcgagattc
    11221 ttacgctcgt tgtgaccacc aatattatag gtttcaccga ctttcccggt ggtcgccacg
    11281 caatacagcg cgcgggcgtg atcttccaca tacagccagt cacggatttg ctgcccgttg
    11341 ccatataccg gcagcggttt acccgccagc gcgttgagga tcatcagcgg gatcagtttt
    11401 tccggaaagt ggtaaggacc gtagttattc gagcagttgg tgatcagcgt cggcagaccg
    11461 taggtccgca gccaggcgcg caccagatgg tcgctactgg cttttgacgc ggaataaggg
    11521 ctgctcggcg catacggcgt ggtttcggtg aagaaatcat ccgtcgagtg caggtcacca
    11581 tatacttcgt cggtggagat atgatgaaaa cggaacgctg attttttatc ttccgtcagc
    11641 gtattccagt aagcccgcgc cgcttcaagc aatgtataag tcccgacaat gttggtttca
    11701 ataaacgctg ccgggccgtc aatagaacgg tcaacatggc tttcggctgc cagatgcatg
    11761 acacagtctg gctgatgctc agtgaatacg cgtgccagtt ctgcccgatc gcagatatca
    11821 actttctcaa aggcaaagtg ctcgctttgc gcgaccggtg ccagcgacat caggtttccg
    11881 gcgtaggtca gcttatcgac cactaccacc gcatcgctcg tttcgttgat gatataacgc
    11941 accagcgccg agccaataaa cccggcacca cctgttatca gaatttttct catcagcgcc
    12001 agactccttt ggcatcgacg acatactgct gatggacatt gtcgccattg ataactttga
    12061 actgactatg atcgaccagc atcaccagca cgtctgccgt tgccagcgcc tcgtcaagct
    12121 gcgccagagt acaaagcccg gtcagttttt tcggcaactg gtggatgtta ggctcaacaa
    12181 ccagcgtttc gccgctgtgc cactgggcga tcagttcagc gatttccatc gccgggcttt
    12241 cgcgcaggtc atcaatattc ggtttaaacg ccagaccaaa gcaggcgatt ttcagttcac
    12301 tggcgcgttt atcggtagca gcaaggcagt cggcaaccgc cgctttcacc tgatcgataa
    12361 cccagaacgg tttgtgatcg ttaacttcgc gcgcggtacg gataagccgc gcctgctggg
    12421 ggttctgtgc cacgataaac cacggatcaa cagcaatgca gtgaccgccc acgccagggc
    12481 caggctgaag aatattaacg cgagggtgac gattcgccag gcgaatcagt tcccagacgt
    12541 taatcccctg atcggcacaa atcagcgaca attcattagc aaaagcgata ttcacatcgc
    12601 ggaagctgtt ttcggtgagc ttacacattt ccgccgtccg cgagttagtg acgacacact
    12661 caccttcgag gaaaattttg tacagttcgc tggcgcgggt cgaacaaacc ggcgtcatac
    12721 caccaatcac gcgatcgttt ttaatcagct cgaccataac ctggcccggt aacacgcgtt
    12781 ccgggcagta agcaatgttg acgtccgcct gctcgcccac ctgctgtggg aaagtgagat
    12841 ccggacgcat ctctgctaac cattctgcca tcttctcggt tgaccccacc ggcgaggtgg
    12901 attcaaggat caccagcgcg ccttttttca gcactggcgc aatggagcga gcagccgatt
    12961 caacgtaggt catatctggc tcatgatcgc ctttaaacgg cgtaggtaca gcaatcagcc
    13021 aggcatccgc ttcaactggc gtcgtgctcg ctcgtaaaaa accgccttct acggcagttt
    13081 ttactacgct cgccaaatca ggttcgacga tatggatttc gccacgattg atggtatcaa
    13141 ccgcgtgttg gttgatatcg acaccaatca cctgtttttg ccgtgaggca aacgcagctg
    13201 ctgtaggcag cccgatgtaa cccagtccga taacagaaat ggtcgcaaaa ctcatagtga
    13261 tatccgatta ttttttaacg cttccagaat gcgagagcat gcctgaccat caccatacgg
    13321 gttatgggcg cggctcatag cttgatattc gttttcgtct attaaaagac gcgtcacttc
    13381 ctcgacaatt cgctgcttat ccgtgcctac cagacgcacc gtacccgccg tcaccgcttc
    13441 cggacgctca gtggtatcgc gcatcaccag caccggtttc cccagcgaag gcgcttcttc
    13501 ctgaatgccg cctgagtcag tcaaaatcag ccaggcgtgg ttcatcagcc agacaaacgg
    13561 taaatactcc tggggatcga tcagaatgac atttttcaca tgccccagaa tgcgattgac
    13621 cggctctctg acgttcgggt tgagatgcac cggatagaca atctggatgt cctggtgcgt
    13681 ggtggcgatg tctgccagcg cgtggcagat ttcttcaaag ccacgaccga aactttcacg
    13741 cctgtgaccg gtcaccagaa tcatcttttt atcggggtcg ataaacgggt aatttgccgc
    13801 cagttctgaa cgcagcgtgt cgctgctcat cacctgatca cgcacccata acagtgcatc
    13861 aatgactgta ttaccagtaa tgaagattcg gctatccgca acgttttcac gcagcaagtt
    13921 ttgccgggaa gtttcggttg gagagaagtg atacatcgcc agatgcccgg tcaatgtacg
    13981 gttagcctct tccggccacg gcgaatagag atcgcccgtg cgtaaaccag cctcaacgtg
    14041 accaacagga atacgctgat aaaacgccgc caggctggtt gccagcgtcg ttgttgtgtc
    14101 gccgtgaacc agcacgacgt ctggtttgaa ctcggcaaga ataggtttta gcccttccag
    14161 aatccgacag gttatctctg tcaggccctg tcctggctgc attatgttga gatcgtagtc
    14221 aggtacaatg gaaaagagtt tcagcacctg atcgagcatc tcccgatgct gcgcagtgac
    14281 gcaaacttta gcctcaaaaa aaggatcttt tgccaacgca tgcaccaacg gagccatctt
    14341 gatggcttcc gggcgcgtac caaatacagt cagtactttc acatcgattc tcttcgaata
    14401 agcggcgagc gcctttgcgc tcgcagcagc agtgttgcta tttcgagcaa cggcgggtta
    14461 atgcgacacc agccccgatc agccccccga caatgcccca cataatcatc aggaaggcac
    14521 gacgtgggct atcgcgtttt accggttctt ccggcgtacg caaatagcga taggtctgaa
    14581 aacgcggatc cagagttgga ccaacattca gggtgtttaa catggcccga ttctgatcat
    14641 agtcgagatc aaaggccgga ccgacggcct gtaaattttc cagtcgagcc tggagcattg
    14701 gacgcccaag caggaacatt tctgaatcag gtaattcctc ggcaggcaca tctgtcgcac
    14761 tgcgcgaaat attatgctgc tcagcaattt tcagcgcctg ctcaatgctg ttcatccggc
    14821 ggtcgtagat ggctttcgcc acctcttcct gacgcttcac ctgagctttc atctggatgg
    14881 tgcgtgccgc ccatgcgcct ttcagctcat cattcagatg gctggctgca cgctggctgg
    14941 caaaagcaac atactgacgt aacaggttat tagcgtcagg cgcggtttcg gcaataagct
    15001 tcacgctgtc attgaccgcg cgggtaaagt ctccggggat aaactggatg ttgttaatca
    15061 tttcatccag caacgccgca tcggctttgc tgttgcccac catccgctgt ttgtaatagt
    15121 cggtttgcag ccagaactct ctgcgggtat cccacgaggc cagttgcata acaaactctt
    15181 tataggcttc gtccatgacc gatggttgat cggcagaagc catgtttgaa cggacatcca
    15241 ggttacgcaa aaattgctgc tgcgagtaat atccccccag catattcacc gttggacgat
    15301 cggtaatcgc cgtcgagctc cactcctgac gagcaaaaaa agtatacgcc agcgcgatta
    15361 acgcaaacgc cagccccatg ccaataatcc atagcttccc agcccacaag gtacgaaaca
    15421 acccacgaat atccagttca ttttcagcgt cttcggccgg tttcccaggc attggttgtg
    15481 tcatcacatc ctcatttatt tggttaaatt ggggctgcca ccacgatttc tacgcagtct
    15541 gcgttttacg cgcttaataa agcgagcaac tttccaggca cgcttaatgc aatatccata
    15601 gaggaagaat gctagcaaaa agagcaccag catgacccac tccgggacaa aatgagaata
    15661 ttctgccagc acgccaatgg aagcgagcag tgctgcggca agggtaatca gcacaaacgc
    15721 ctgacgggaa gtaaacccgg cacgcatgat caaatggtga atatgctgac ggtcaggaga
    15781 gaatgggctc atgcctttac gcaggcgacg gtacataatc gccaccatat ccattagcgg
    15841 aatggcgatt atccacaaag cggtaaccgg gctgatggga tgggttttgc cctgggtcgt
    15901 ttcgagcagg atccagataa cggtaaaacc aatcagcgta ctgcccgcat cacccataaa
    15961 gactttgtag cggcgaccca ggataccaag gttaagcatg atgtatggca ggatggcggc
    16021 gatcatcgca aagcaccaga ttgcgaggct ggtttgcccg tcgaaccaca aaatcatacc
    16081 gattgctgca aacgagacgc aggacaaccc gcccagcaag ccatcaatgc catcaaccat
    16141 gttgaacgca ttaatggccg cccagacggc aaatagcgtc aggaagtaac caaacggtcc
    16201 gagcaccatc tcccaggagc caaagatata acccaggcta ctgagataaa gtttgccgaa
    16261 caccatcata acaatgccaa cagcggcctg tatggtggca cggattttta cgctgatatc
    16321 aaaacggtca tccagcgcgc caatgaaaac aagcacaccg gcacaagcga gatagagaga
    16381 tgcatgcgga atatagtaat cgacaattcc gaacgtgaag caaatccctg cgtaaaccga
    16441 aatcccccca acgagaggta tcaatccctg gtgacgtttg cggaagtttg gtttatccac
    16501 taaaccgact ttttttgcca ccttacgggc aaaaaacaga aacagtgtcg tgaataaaaa
    16561 aatactgatg agatcagtac tcactgtcag taaattcaca atgcatgctc tcagagaaaa
    16621 ttattagcag aagtataacc acgaagacct ttattcagaa gggaaagtcc gttccgaacc
    16681 caccagtcct gtgcaaaaat taaccatttg atatgcaaat tgcataacat gccagcaaat
    16741 tccaggaatt ttcctaacat cgccagcgcg gcattaagat tacagatata aaagcaaaac
    16801 gccacgtaaa cacgtggcgt ttttggcata agacaaattt atgagcgttt catcatttcg
    16861 aagaaatcgt cattggtctt ggtcatggcc agtttattaa tgaggaattc cattgcatcg
    16921 atttcgccca tcgggtgaat gattttgcgc aggatccaca ttttctgcag ttcttcctga
    16981 gtcgtgagca gctcttcttt acgggtaccg gaacggttgt agtcgatagc cgggaagacg
    17041 cgtttttcag cgatcttacg agagaggtgc agttccatgt tgcctgtacc tttaaactct
    17101 tcgtaaataa cttcgtccat tttagaaccg gtatcgataa gcgccgtcgc gataatggtc
    17161 aggctgccgc cctcttccac gttacgcgcc gcaccgaaga agcgtttcgg acgatgaagg
    17221 gcattggcgt ccacaccacc ggtcaacact ttacctgacg ccggaacaac agtgttgtaa
    17281 gcgcgcgcca gacgagtgat ggagtcgagc agaatgataa cgtctttctt gtgctcaacc
    17341 aggcgtttgg ccttctcgat caccatttcc gcaacctgaa cgtggcgaga tgcgggttcg
    17401 tcaaaggtag aagcaacaac ttcacctttt accagacgct gcatctcggt tacttcttcc
    17461 ggacgttcgt cgatcagcag aaccatcagc acacaatccg ggtggttgta agcaatgctc
    17521 tgagcaatgt tctgcagcag catagtttta ccggctttcg gcggtgccac aatcagacca
    17581 cgctgaccac gaccgatagg tgatgccaga tccagtacgc gagcggttaa atcttccgta
    17641 gaaccgttac cacgttccat acgcagacga gagtttgcgt gcagcggggt taagttctca
    17701 aagaggattt tgttgcgggc gttttcaggt ttgtcgaagt taacttcgtt aactttcagc
    17761 agcgcaaaat agcgttcacc ttctttcggc gggcgaatct taccagagat ggtatcacca
    17821 gtgcggaggt tgaaacggcg gatttggcta ggggaaacgt agatgtcatc aggaccggcg
    17881 aggtaggagc tgtctgcgga acggaggaaa ccaaatccat cctgcaatat ctccagtacg
    17941 ccatcaccaa agatatcttc gccactcttt gcgtgctgct tcaggatggc aaaaataatg
    18001 tcctgcttac gcatacgagc caggttttcc agccccatat tttcgccgag agtgatcagc
    18061 tcagaaaccg gcgtattctt taattcggta agattcatag tggtgtgagt tcttaaactt
    18121 ggggtaaatc tcgaacttaa tgttgtgaat ggtatggcag gatcatccat gcctgtttac
    18181 ggtcatcgac tcatgtcttt tcgctgcctg gtcacaggag agtacgcaga actgaaacga
    18241 caagacggat tgagtgacga gccagaaatc tgttcacttc gcatttaaga taaaacggga
    18301 agcgttggaa attacaagat tcaaacttaa taaggtatgt ttaatacgaa gtcaacacta
    18361 agttagcatg actcacgccg ggcgtccagt ttttagcgac ggggcacccg aacatgaaat
    18421 tcccttacgc caggttagcg tcgaggaact ctttcaactg acctttagac agtgcaccca
    18481 ctttggttgc cgccacttca ccgtttttga acagcagcag agtcgggata ccacggatgc
    18541 catatttcgg cgcagtgcca gggttttgat cgatgttcag ttttgcaacg gtcagtttgc
    18601 cctgatattc gtcagcgatt tcatccagaa tcggggcgat cattttgcac ggaccgcacc
    18661 actctgccca gaaatcgacg aggatcgccc cgtccgcttt gagtacatcc gtgtcaaaac
    18721 tgtcgtcagt caggtgaata attttatcgc tcatatataa ctccacagga ataagcctgg
    18781 cgtgttggtt tcgttgttgg tgtaacatta accaactaaa ggttgacttt atttcaccgg
    18841 atacgctttc gtaaagcaat agtaagctga tattctacca cactatgagc aaaacacatt
    18901 taacagaaca gaagttttcc gacttcgccc tgcatccgaa ggttgtagaa gcccttgaaa
    18961 aaaaagggtt tcataactgt acgcccattc aggcactggc ccttccgctg acgctggcgg
    19021 gtcgtgacgt agccgggcag gcgcaaaccg gtaccgggaa aacgatggcg tttcttacgt
    19081 caacgtttca ttatcttctc tctcatcctg cgattgccga tcgcaaggtg aatcaaccac
    19141 gtgccttaat tatggcaccg acgcgtgaac ttgccgtgca gatccatgcc gacgcagaac
    19201 cgctggcgga agctaccggc ctgaagctgg gtctggctta cggtggtgat ggctacgaca
    19261 aacagctgaa agtgctggaa agcggcgttg acattctgat tggcactacg gggcgtttaa
    19321 ttgactacgc caagcagaac cacattaacc tcggtgccat tcaggtggtg gtactggacg
    19381 aagccgatcg catgtacgat ctgggcttta ttaaagatat ccgctggctg ttccgccgta
    19441 tgccgcctgc aaaccagcgc ctcaacatgc tgttctccgc cacgctttcg taccgggtac
    19501 gtgaactggc gttcgagcag atgaacaatg ccgaatatat tgaagtggaa ccggaacaga
    19561 aaacgggcca ccgtattaaa gaagagcttt tctacccttc taacgaagaa aaaatgcgtt
    19621 tgctgcaaac gctgatcgaa gaagagtggc cagacagagc gattattttc gccaatacca
    19681 aacaccgttg tgaagagatc tggggccacc tggcggcaga tggtcatcgt gtcggtttgt
    19741 tgacaggcga tgtcgcgcag aaaaaacgtc tgcgtattct tgatgaattt acccgtggcg
    19801 atctggatat tctggttgcc accgacgttg ccgcgcgtgg tttgcatatt ccggcagtga
    19861 cgcacgtctt taactacgat ttacccgatg actgtgaaga ttacgttcac cgtattggtc
    19921 gtacaggtcg cgcaggcgca agcggtcact ctatcagcct ggcgtgtgaa gagtatgcat
    19981 tgaatttgcc tgctattgag acctatattg gtcactcaat tccggtaagc aaatacaatc
    20041 cggacgcatt gatgaccgat ctgccaaaac cgctgcgcct cacgcgccca cgtacaggca
    20101 atggtccgcg tcgtactggc gctccgcgta atcgtcgtcg ttcaggttaa ataaaatgtc
    20161 atactcaaaa tcattcaaac tgtatcaaga tggcaagaga atgaatcccg atgagcatac
    20221 tgtagtaagt gattcaggtg aaagaatgca gccaacacag agacagattg aaggatgaag
    20281 agtatgggtt ccacctcgtc gctgtatgca gccattgatc tcggttcgaa tagttttcat
    20341 atgctggttg tgcgcgaggt ggctggaagc atccagacgc tgacgcgaat aaaacgcaaa
    20401 gtgcgtctgg ctgctggcct gaatagcgaa aatgccctgt ctaatgaagc aatggagcgc
    20461 ggttggcaat gtctgcgcct gtttgctgaa cgtctgcaag atatccctcc ctcgcaaatt
    20521 cgcgttgtcg ctacggcgac attacgtctt gccgtcaatg cgggtgattt tattgccaaa
    20581 gcgcaggaaa tcctcggttg tccggtacag gtgatcagcg gtgaagagga agcacgtctg
    20641 atttatcagg gcgttgctca cacaactggc ggtgccgatc agcgcctggt ggtggatata
    20701 ggcggtgcca gtactgaact ggtaaccggc acgggtgcac aaaccacctc gttgttcagc
    20761 ctgtcgatgg gctgcgtcac ctggctggaa cgctattttg ccgatcgtaa tctggggcag
    20821 gaaaattttg atgctgcaga aaaagcggca cgcgaagtgt tacgtccggt tgccgatgaa
    20881 ttacggtatc acggctggaa agtgtgcgtt ggtgcttccg gcaccgtgca ggcgttacag
    20941 gaaatcatga tggcacaggg gatggatgaa cgcattaccc tggaaaagtt gcagcaattg
    21001 aaacagcgag ccattcattg cggtcggctg gaggaactgg agattgacgg gctgacgctg
    21061 gaacgtgcgt tagtgttccc gagtggtctg gcgatcctga tcgccatttt taccgaactg
    21121 aatattcagt gtatgaccct ggcgggcggt gcgctgcgtg aaggcctggt ctacggcatg
    21181 ttgcatctgg ccgtcgagca ggatattcgc agccgtacgc tgcgtaatat tcagcgccgc
    21241 tttatgatcg atattgatca ggcgcagcgc gtagccaaag ttgcggctaa cttcttcgat
    21301 caggtggaaa aggaatggca tcttgaagca ataagccgcg atttgctcat cagcgcctgt
    21361 cagcttcatg aaatcggcct gagcgttgac tttaaacaag cgccgcaaca cgctgcttat
    21421 ctggtgcgta atctggatct tcccggtttt acccccgcac agaaaaaatt gctggcgacg
    21481 ctactgctca accagactaa tccggtcgat ctctcatcgc tgcatcagca aaatgccgta
    21541 ccgccgcgcg tcgcagaaca actctgccgt ttactccgcc tggccatcat ttttgccagc
    21601 cgtcgccgtg acgatctcgt gccagagatg acattacagg ctaaccatga actgttgacc
    21661 ttgacgcttc cgcaaggttg gctaacccaa catccgctgg gtaaagagat tattgctcag
    21721 gaaagccagt ggcagagcta tgtccactgg ccgctggaag tgcattaatg agtaagtgcc
    21781 ggatgcgatg ctgacgcatc ttttccggcc ttgattattt ccctcgtttt gccgccatca
    21841 tcgctttcag attcgccaga tggctttgcc ctttctgcat ccgttcttcg gcgctgacca
    21901 ctttgcgctc ctgttcccaa atcagatcat cctgcggcag ctccagcaaa aagcggctcg
    21961 gctccgggcg caccagctcg ccgtactgac ggcgttcttt acacagcgta aaggtcaatt
    22021 ccttctgggc gcgggtaatg ccgacatagg ccagccgccg ctcctcatcg atattatctt
    22081 catcgatgct gctctggtgc ggcaaaaacc cttcttccat accgaccatg tagacataag
    22141 gaaactccag cccttttgac gcgtgcagag tcatcagttg cacctgatcc agctcttctt
    22201 cactctcacc acgctccatc atgtcgcgca aagtaaagcg cgtcaccacc tgggtgagcg
    22261 tcatcggctc atccagttcg ctgccttcca acatctccgt catccagcta aacagttggt
    22321 tgacgttctt catgcgcatt tcggcggctt tcgggctggg cgatgtttcg tacagccagg
    22381 attcataatc catgccgtgg atcagatcgc gcaccgcggc aatcggctcc cgctccgcca
    22441 gacgctggat ttctgccaac cagtgagtaa agcgggtcaa tgcttcataa ccacgtccgc
    22501 taagcgtctg actcaggccc atatcaaagc tggcggtaaa catgctttta ttgcgcgtca
    22561 tcgcccactc acccagcttt ttcagcgtcg ccgggccaat ctctctcttc ggcgtgttaa
    22621 cgatacgcag aaatgcgctg tcatcgtccg ggttagtcag cacgcgcaga taagccagca
    22681 agtccttgat ttcaggacga gagaaaaacg acgtaccacc agaaattttg tacgggatgc
    22741 ggttttgcat caggaatttt tcaaacactc gcgactgatg gttaccgcga taaagaatag
    22801 cgtaatcttt gtactgcgtt ttattgacga agtgatgcgc aatcagttca ccagtgacgc
    22861 gctcggcttc atgttcttcg ttattcgcgc ttaaaacttt aagctctgtg ccgtaaccca
    22921 gttcggagaa cagacgcttc tcaaagacgt gcgggttatt ggcgatcagg atgttcgccg
    22981 ctttcaaaat acgtccggaa gagcggtagt tctgctcaag cttaatcacc ttcagcgccg
    23041 gaaaatcctg gctcagcagc accaggtttt gcggacgtgc gccgcgccag gagtagatcg
    23101 actggtcatc gtcacccacc acggtaaagc gcgcgcggct gcccaccagc agtttcacca
    23161 gttcatactg gctggtgttt gtgtcctgat actcatccac cagcaggtag cgaattttgt
    23221 tctgccagcg ctcgcggact tcttcattgc gttgcagaag tagcgtcggc aataaaatca
    23281 gatcatcgaa gtcgagcaca ttacaggctt tcaggtgtgc atcatacagc ccataacaat
    23341 gggcaaaaat acggtcccgc tcgccaatcg cacttgctgc cgcctgggac ggtgttttga
    23401 gatcattctt ccagttagag atggtcgaaa tcagttgttg caggagaact ttgtcatctt
    23461 caatcagccc ctcggtcaac tctttaagca aagcaagctg atcggtatcg tcaaacagcg
    23521 aaaagttcgc cttcatccca agcgccgcat actcgcgttt gatgatatcc aaccccagcg
    23581 tgtgaaaagt ggagatcatc agcccgcgcg cctctttgcg acccagcgtc tgcccgacac
    23641 gctctttcat ctcgcgcgcc gccttattgg taaaggtcac cgccgcgata tgtcgcgcct
    23701 gataaccgca accgcggatc agatgggcga ttttattggt gatcacacga gttttaccgg
    23761 aacccgcgcc cgccagcacc aggcaggggc cggtaacgaa ttcgacagct tgttgttggc
    23821 cggggtttag acgcataggt gtattgctca atcttcgaac ggggggagga ttgtagcaga
    23881 atcgcatttg aatgtgaccg cgtgtaagcc gctaaccggt tggctgcgga tgtttaaatc
    23941 agagagagaa gaccgaaacc ggagttcatc gtgaatccat tagacttaga aaatatcggg
    24001 tcgtaacgtt gtgttattac tttttcagag tttactaagg agaggtgtac tcgtggcgat
    24061 taatttcagt cctaaggttg gtgaaatact ggaatgcaac tttggtaact atcctgttag
    24121 ccagaatgga cagttcagca ccaagtatta cgatggccgc attcctcctg aaatgataaa
    24181 aaacaggtta gttgtcgtgc tcaacggaaa aattaatggc aacgcatgta tcgtcgttcc
    24241 attatcaacc actcgcgatc atgacaagtt aaatcgtgga atgcatgttg aaatagccag
    24301 taatgttatc aatggcctgc aattctttga tcagcagatt cgttgggcca aagccgacct
    24361 ggtacaacaa gtcagtcgaa accgattaaa tagagcaagg acttacagag ggtatcttaa
    24421 tcaatgtttg ccacatgagt tggttgcaga catacagagg gcggtcatca agtcaatcaa
    24481 tgccatatcg ctcataaatt gacaataaaa tcaccatccc cgataatgac tttgtagccc
    24541 atagaggccc taagttttct ccccttgagg gacctgcgaa gcccggattt tccgggcttt
    24601 tgccatatat gtaccagccc ctccctgact gacaattacg ttagcatctg cggatcatgc
    24661 taaaatcgcc gcctgacaat tattcactca aggcacgatc atggcaaaaa cagcagcagc
    24721 actgcatatc cttgtaaaag aagagaaact ggctctggat cttctcgagc agattaagaa
    24781 cggtgccgat ttcggcaagc tggcgaagaa acactccatt tgcccatcag gcaaacgcgg
    24841 cggtgattta ggtgaattcc gccagggtca gatggttccg gcgttcgata aagttgtgtt
    24901 ctcttgtccg gtactggagc caaccggccc gctgcacacc cagttcggtt accacatcat
    24961 taaggtgctg taccgtaact aatagcaagg ccttctccag gagaaggcct tgagtgtttt
    25021 ctccctctcc ctgtgggaga gggtcggggt gagggcatca gcgcgcactt aacccgcaac
    25081 tgcaatacgt ttcatatccg tcatatagcc gcgcagtttc ttacctacct gctcaatcgc
    25141 atggcagcga atcgcttcgt tcacatcacg cagttgcgcg ttatctaccg caccttccgg
    25201 aatagcttta cccagatcgc ccggttgcag ctctgccata aacggtttca gcagcggcac
    25261 acaagcgtaa gagaacagat agttaccgta ctcggcggta tcagagataa ccacgttcat
    25321 ttcgtacaga cgcttacggg cgatggtgtt ggcaatcagc ggcagttcgt gcagtgattc
    25381 atagtaagca gattcttcga tgatgccgga atcaaccatg gtttcaaacg ccagctcaac
    25441 gcccgctttc accatcgcga tcatcagtac gcctttatcg aagtactcct gctcgccgat
    25501 tttgccttca tactgcggcg cggtttcgaa ggcggttttg ccggtctctt cacgccaggt
    25561 cagcagtttc ttatcatcgt tggcccagtc cgccatcata ccggaggaga attcgccgga
    25621 gatgatgtcg tccatatgtt tctggaacag gggtgccatg atctctttca gctgttcaga
    25681 cagcgcgtaa gcacgcagtt tcgccgggtt agagagacgg tccatcatca gggtgatgcc
    25741 gccctgcttc agcgcttcgg tgatggtttc ccaaccgaac tgaattagtt tttctgcgta
    25801 tgccggatcg gtgccctctt ccaccagctt gtcgaagcac agcagcgagc cagcctgcaa
    25861 cataccgcac aggatggttt gctcacccat caggtcagat ttcacttccg caacgaagga
    25921 cgattccagc acgcccgcac ggtgaccacc ggttgctgcc gcccatgctt tagcgatcgc
    25981 cataccttcg cctttcggat cgttttccgg gtgaacggca atcagcgtcg gtacgccgaa
    26041 tccacgtttg tactcttcac gcacttcggt gccagggcat ttcggcgcaa ccatgactac
    26101 ggtgatatct ttacggatct gctcgcccac ttcgacgatg ttgaaaccgt gcgagtaacc
    26161 cagcgccgcg ccgtctttca tcagtggctg tacggtgcgc actacatcag agtgctgctt
    26221 gtccggcgtc aggttaacca ccagatccgc ctgcgggatc agttcttcgt aagtaccaac
    26281 tttaaaaccg ttttcggtcg ctttacgcca ggacgcgcgc ttctcggcaa tcgcttcttt
    26341 acgcagagcg taggagatat cgagaccaga atcacgcatg ttcaggccct ggttcagccc
    26401 ctgtgcgcca cagccgacga taaccacttt tttaccctga aggtagctcg cgccgtcggc
    26461 gaattcgtcg cgccccataa agcgacattt gcccagctgt gccagctgct ggcgcaggtt
    26521 cagtgtattg aagtagttag ccatggtgat tcctcgtgat gttgtgcttc ttattgttcg
    26581 gttcgcgttt gcgagattga attcactata tgacaggaaa tttattgcgg aaattgatat
    26641 attcacaacg tcacattgca atttctgcaa cgtcaacatt gagggctgcg ccattggatt
    26701 tacgcgatct gaaaaccttc ctgcatctgg cggaaagccg ccattttggc cgcagcgcgc
    26761 gggcgatgca cgttagcccg tccacgctct cacggcagat tcagcgcctg gaagacgatc
    26821 tcggtcaggc attatttgtg cgcgataacc ggacggtgac gctgaccgaa gcgggcgaag
    26881 agttacgcgt tttcgcccag caaacattgt tgcagtatca gcaactgcgc cacaccatcg
    26941 atcagcaagg gccgtcgctc tctggcgagt tacatatttt ctgctcggtg accgccgctt
    27001 acagccatct accgccgatt ctcgaccgct tccgcgcgga acacccgtcg gtggagatta
    27061 aacttactac tggtgatgcg gcagatgcga tggaaaaggt ggtcactggt gaagcggatc
    27121 tggcgattgc gggtaaaccg gaaaccttgc ccggcgcagt ggcgttttcg atgctggaga
    27181 atctggcagt agtgctgatt gcccccgcgc tgccctgccc ggtgcgtaat caggtgtcgg
    27241 tagagaagcc ggactggtca acggtgccgt ttatcatggc cgatcagggg ccggtacgcc
    27301 gccgcattga actgtggttt cggcgtaaca aaatcagtaa cccgatgatt tacgccacgg
    27361 ttggcgggca tgaagcgatg gtatcgatgg tggcgctcgg ctgtggcgtg gcgctgttgc
    27421 cggaagtggt gctggaaaac agcccggaac cggtgcgtaa ccgcgtgatg atactagagc
    27481 gaagcgatga gaaaacgccg tttgagctgg gcgtgtgtgc gcagaaaaag cggctgcatg
    27541 agccgctgat tgaagcgttc tggaagattt taccgaacca ctaacccgcc aaaaagaacc
    27601 tgaacgccgg gttattggtt tcgtcgtggc aatcgtagcc cagttcattc agccgggttt
    27661 cgaaatccgg ttcatggtcg ccaagctcga acgccgccag tacgcgcccg tagtcggtac
    27721 cgtgactgcg ataatggaac agagaaatat tccagtgcgt acccagcgtg ttgaggaagc
    27781 gcagcagcgc acccggcgat tccggaaatt cgaagctgta gagacgttcc tgcaacggat
    27841 gcgatggacg cccgccaacc atatagcgca catgtagctt cgccatttca tcgtcggaga
    27901 gatcaaccac gctgtagccg ccgtcgttga gcatctgcaa aatttctttg cgctcttcga
    27961 ggccgcggct taagcgcacg ccgacaaaga tgcaggcgtt tttggcatcg gcaaagcggt
    28021 agttgaattc ggtgaccgaa cgtccgccaa gcaactggca gaatttgagg aagctacctt
    28081 tctcttccgg aatggttacc gccagcaacg cttcacgctg ttcacccagc tcacaacgtt
    28141 ccgagacgta gcgcaggccg tgaaagttca cgttagcacc ggaaagaata tgcgccagcc
    28201 gttcgccgcg aatgttgtgc tgggcgatat attttttcat tcccgccagc gccagcgcgc
    28261 cagagggttc cgccaccgca cgcacatctt cgaataaatc cttcatcgcc gcacagatcg
    28321 catcgctatc gacggtgatg atgtcgtcga gatactcctg gcataaacgg aaggtttcgt
    28381 caccgatgcg ttttaccgct acgccttcag caaatagccc tacgcgcggc agatcaaccg
    28441 gatgacccgc atccagcgct gctttcaggc aggcggagtc ttccgcttct acggcgatca
    28501 ctttgatttg tggcatcagt tgtttgatca gcaccgcaac gcccgccgcc agaccgccgc
    28561 cgccgactgg cacaaatacg cggtcgagat gggcgtcctg ctggagcagt tccagcgcca
    28621 gcgtgccttg cccggcaatc accatcggat ggtcgaacgg cggcacccag gtgaacccct
    28681 gctgctgtga cagttcgatc gctttagctt tcgcttcgtc aaagttcgcg ccatgaagca
    28741 gcacttcgcc gccgaatcca cgtaccgcat cgactttgat gtcggcggtg gcggttggca
    28801 taacgatcag ggccttcacg cctaaccgcg cagaagaaaa cgcgacgccc tgcgcgtggt
    28861 tacccgcaga agcagtgatc acgccgtgcg ctttttgttc ttccgtcagg cccgccatca
    28921 tggcgtatgc gccgcgcagc ttaaagctgt gcactggctg gcgatcttcg cgcttcacca
    28981 gaatgacgtt atcaagacgc gacgacagtt tttccatttt ttgtagcggc gtaacctgcg
    29041 ccgcctcgta aaccggcgcg cgcagcactg ctcttaagta ttcggcacct tccggagcac
    29101 cggacagggg ttgcgagtca gccattatta accccccagt ttcgatttat cgcgcaccgc
    29161 acctttgtcg gcgctggttg ccaggctggc gtaggcgcgc agggcaaagg aaacctgacg
    29221 ttcacggttt ttcggcgtcc aggctttgtc accccgagct tcctgcgctt cacgacgcgc
    29281 cgccagttcg gcatcgctta cctgtaactg aatgccacgg ttcgggatgt cgatagcgat
    29341 caggtcacca tcttcaatca ggccaatgct gccgccgctt gccgcttccg gtgagacgtg
    29401 gccgatggaa agaccagagg tgccgccaga gaaacgaccg tcggtgatca gcgcacaggc
    29461 tttaccgaga cccattgatt tcaggaagct ggttgggtag agcatttcct gcatgccagg
    29521 gccgcctttc gggccttcat agcggatcac caccacatcg cccgcgacaa ctttgccgcc
    29581 gagaatcgct tctaccgcgt cgtcctggct ttcgtacact ttcgccgggc cggtgaattt
    29641 gaggatgctg tcatcgacgc ccgcggtttt aacgatgcag ccgttttctg cgaaattacc
    29701 gtagagcacc gccaggccgc cgtctttgct gtaggcgtgt tccagcgagc ggatacagcc
    29761 attggcgcga tcgtcatcga gagaatccca acggcaatcc tgcgagaatg cctgtgtggt
    29821 acgaatgcct gcaggacctg cgcggaacat attttttacc gcgtcatcct gggtcagcat
    29881 aacgtcgtat tgttccagcg tttgcggcaa cgtcaggcca agtacgtttt tcacatcacg
    29941 gttcagtaac cccgcgcgat ccagttcgcc gagaataccg ataacaccac cagcacggtg
    30001 aacatcttcc atatggtatt tctgggtgct cggcgcaact ttacacagct gtggaacctt
    30061 gcgggaaagc ttatcgatat cactcatggt gaagtcgatt tccgcttcct gcgccgccgc
    30121 cagcaggtga agtacggtgt tagtcgatcc acccatcgcg atatccagcg tcatggcgtt
    30181 ttcaaacgcc gctttgctag caatattgcg cggcagtgca ctttcgtcgt tttgctcgta
    30241 gtaacgtttg gtcaattcaa caatgcgttt accggcattg aggaacaact gcttacggtc
    30301 cgcgtgggtt gccagcagcg agccgttgcc cggctgcgac aggcccagcg cttcggtcag
    30361 gcagttcatt gagttagcgg taaacatccc ggagcaggag ccgcaggtcg gacacgcgga
    30421 acgttcaacc tgatcgctct gggagtcaga aactttcggg tctgcgccct ggatcatcgc
    30481 atcaaccaga tcgagtttga ttatctgatc ggacagtttg gttttcccgg cctccatcgg
    30541 gccgccggaa acaaagatca ccggaatatt caggcgcagg gaagccatca gcatccccgg
    30601 ggtgattttg tcgcagttag agatgcagac catggcgtcg gcgcagtggg cgttgaccat
    30661 atactcaacg gaatcagcga tcagttcgcg agatggcagt gaataaagca tccccccgtg
    30721 gcccatggca atcccatcat ccaccgcaat ggtgttgaac tctttggcaa cgccgccagc
    30781 cgcttcaatt tgttcggcga ccagtttacc gagatcgcgc agatggacgt gacccggtac
    30841 aaattgggtg aacgagttca caaccgcgat aatcggcttg ccaaaatcgg cgtcggtcat
    30901 tccggtggcg cgccacagcg cacgagcacc cgccatatta cgaccatgag tggtggtggc
    30961 ggaacggtac ttaggcatac tttatttact cccagtgtct gtctcgtaaa tgggacggtg
    31021 cgtgccgtcc cattttttgt atttattgat taacttgatc taaccagccc catttatctt
    31081 cggtttcgcc agtgaagagg ccgaagaagg cttgctgaat gcgtttggta accgggccac
    31141 aacggccttc gccaacctga ataccgtcta cgctgcgcac tggcgtgatt tctgccgcag
    31201 taccggacat aaacacttca tccgccaggt acagggattc gcgcgacaga acctgctcac
    31261 gcacttcaat tcccagctct ttcgccagtt tgatgatggc atcacgggta atacccggca
    31321 gcgcggagga ggtgaacggt ggggtgaaca gcacaccatc tttcacttca aacaggtttt
    31381 cgcctgcgcc ttcagagata taaccgttca catccagcgc gataccttcc tgataaccgt
    31441 ggcggcgcgc ttcgctaccc accagcaggg aagagagata gttaccaccg gcttttgccg
    31501 cggttgggat ggtgtttggt gctgcgcggt tccaggagga aaccatcgca tcgatcccct
    31561 gctccagcgc ttctgcgccc agatacgctc cccacgggaa agcggcgata atcacatcgg
    31621 ttgagtatcc cgctggcggg tttacaccca tgccaacatc accaacgaag atcagcggac
    31681 ggatataggc gctggtgaga ttgtttttgc ggatcacgtc acgacaagct tccatcagct
    31741 catcaatgct ctgcgaaacc gggaagcgat agattttggc ggagtcatgc agacgctgca
    31801 tatgctcacg atggcggaat acaaccggtc ctttgtgcga gtcgtagcaa cggatgcctt
    31861 caaaaaccga ggtgccatag tgcagcgcgt gcgacatcac atgcaccttc gcgtcttccc
    31921 agcgaaccat ctccccattg aaccaaatgt aatcagcttt cttcgtggtc atttttatat
    31981 tccttttgcg ctcaggcgcg gatttgttgt gatgtggttg tgctctggca gatggcaacg
    32041 tgtgcgacgt ccaccagttt atttaactga ctaaacagta agtcgaccga ccgtgggctg
    32101 gcaacggtca attcgatatt tatattttgt gcatcgctgg cggcggccat attcattgag
    32161 cagacgtgga aaccacgatg acgcaccacg cgtaaaacac gttctaaggt ttctggattg
    32221 aagcgagccg atacattgac ctgatgttgc atcatgataa tttctccaac atttctgaat
    32281 tactggcgcc aggcggcacc agcggccaga cgttctcaag ttcgtcgatt gagacatgaa
    32341 gcaggtatgg cccatcactg ttcagcatgg tgtcgagtgc cgcttcaacc tggtctttac
    32401 gggtgatgtg ttggccaggg atgccgaagg cgctggctaa catgaggaaa tcggggttat
    32461 cagtaagggt ggtttcgctg tatcgttcct gaaaaaacag ttgctgccat tgtcgaacca
    32521 tccctaaccg ttggttatcg agtaagacga ttttcaacgg taactgcttg cgttttacgg
    32581 tgcccagctc ttgcacattc atcatgaaag agccgtcacc ggagatacag acaacggtat
    32641 cgttcggtcg cgcgacttgt gcgccaaccg ccgccggtaa accaaaaccc atggtaccta
    32701 aaccgctgga ggtgatgaaa ttttccgggc gagtgtgggc gatgtgctgc gcagcccaca
    32761 tctggtgctg ccccacatct gtggtcacga cgcaatccgc aggtttacga tccgacagtt
    32821 gttttaacaa caacggcgcg tagatagcgt caccgggatg gtcgtaacgc caggaatgtt
    32881 catcacgcag ctgcgcgcag tgttgctgcc agtcattgat atttaacggc tgctgtaatg
    32941 ctggtaacag agcatttaaa tcaccttgta atgccacatg tgcctgacgc agcttgttca
    33001 tttctgccgg gtcgatatcc atatggataa cactggcgtg tggtgcgaag gtgttcagtt
    33061 tgccggtcac ccggtcatca aaacgtgcac ccacggcgat cagcaggtca cactcctgca
    33121 ccgcgaagtt cgccgctttg gtgccatgca ttcccagcat gcccaggtag tacggataat
    33181 ctgcttcaac tgcgcccagc cctttcagcg tgcaggtggc aggcattttt gtggtagcga
    33241 gaaattctcg taaagcagga actgcctgcg ccatacccac gccaccacca acgtacagca
    33301 tcggtttttg cgcttttgcc agcatctggc gcgcttgctc aacttcggca tgggggaaag
    33361 tcacttcgtt ttcaacggtg gtgaaccacg gttccagatc gccgctggct aactggatat
    33421 cttttgggat atcgaccaga accggaccag gacgacctga gctggcaacg tcgaatgctt
    33481 cagccatgat gcgcggcaac tcttccagcg actgcaccag aaagctgtgc ttggtacagg
    33541 ctaacgacaa tcccaggaca tccacttcct gaaatgcgtc ggtgccgata aacggtgcgg
    33601 acacctgacc agtgatggca acgacaggga tggaatctaa cagtgcgtcc gcaagcccgg
    33661 ttatcaggtt ggttgcgccc ggaccagacg tggcgataca tacgccagtt ttaccggtag
    33721 cacgggcata accgatagcc gccattgccg caccctgctc atgtcggcac agcaagtgct
    33781 ccacgccgcc gtcatacaat gcatcgtaaa ccggcataat tgcgccaccc ggataaccga
    33841 aaacggtgtt cacaccctgt gcccgcaacg catgtaccac ccactgtgcg ccattcatag
    33901 ttagttcccc gtcctgaatc ttgagaaaca gaattttgtg ctgttattca ttgtctgctc
    33961 ctcggttatg tttttaaggt caaaaaaaac ccccggacct ttcggtgcgg gggtcttagt
    34021 tcgttaaggc ttgatctcta agcctttcct cgtccaagtg cagccccgca cggtgggata
    34081 ataatcacca ccacgctaat cacgaccagg ctaatcactc gtagaagggc tgtcattttg
    34141 tcttttcttg catcttgttc gaaggaatgc ctaaagagtt accataggtt ttgtaaatag
    34201 tacaagatat tttttggccg
//
LOCUS       DAPGWB010000033        33798 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.033, whole genome shotgun sequence.
ACCESSION   DAPGWB010000033 DAPGWB010000000
VERSION     DAPGWB010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 33798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33798
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.033"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            201..860
                     /gene="yccA"
                     /locus_tag="RHX79_001563"
     CDS             201..860
                     /gene="yccA"
                     /locus_tag="RHX79_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000375124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease modulator YccA"
                     /protein_id="HDV2196752.1"
                     /translation="MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTV
                     LMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGM
                     GDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPAL
                     HLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR
                     D"
     gene            951..1280
                     /gene="tusE"
                     /locus_tag="RHX79_001564"
     CDS             951..1280
                     /gene="tusE"
                     /locus_tag="RHX79_001564"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusE"
                     /protein_id="HDV2196753.1"
                     /translation="MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHW
                     EVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL
                     PKPVKCI"
     gene            complement(1277..1555)
                     /gene="yccX"
                     /locus_tag="RHX79_001565"
     CDS             complement(1277..1555)
                     /gene="yccX"
                     /locus_tag="RHX79_001565"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HDV2196754.1"
                     /translation="MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSV
                     EVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR"
     gene            1650..2840
                     /gene="rlmI"
                     /locus_tag="RHX79_001566"
     CDS             1650..2840
                     /gene="rlmI"
                     /locus_tag="RHX79_001566"
                     /EC_number="2.1.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytosine(1962)-C(5))-methyltransferase
                     RlmI"
                     /protein_id="HDV2196755.1"
                     /translation="MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVD
                     HQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSY
                     RLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVA
                     VRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY
                     VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV
                     RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI
                     LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFA
                     CRVM"
     gene            2898..3215
                     /gene="hspQ"
                     /locus_tag="RHX79_001567"
     CDS             2898..3215
                     /gene="hspQ"
                     /locus_tag="RHX79_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HDV2196756.1"
                     /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVND
                     ELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPR
                     LRN"
     gene            complement(3260..3673)
                     /locus_tag="RHX79_001568"
     CDS             complement(3260..3673)
                     /locus_tag="RHX79_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HDV2196757.1"
                     /translation="MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVI
                     PVSPKVAGKTLLGQQGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQL
                     GVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK"
     gene            3846..4508
                     /locus_tag="RHX79_001569"
     CDS             3846..4508
                     /locus_tag="RHX79_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HDV2196758.1"
                     /translation="MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLL
                     RGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLE
                     NEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
                     PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQP
                     SS"
     gene            4604..5062
                     /gene="mgsA"
                     /locus_tag="RHX79_001570"
     CDS             4604..5062
                     /gene="mgsA"
                     /locus_tag="RHX79_001570"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HDV2196759.1"
                     /translation="MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA
                     TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV
                     KALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK"
     gene            complement(5094..7148)
                     /gene="helD"
                     /locus_tag="RHX79_001571"
     CDS             complement(5094..7148)
                     /gene="helD"
                     /locus_tag="RHX79_001571"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase IV"
                     /protein_id="HDV2196760.1"
                     /translation="MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL
                     AIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGV
                     LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQ
                     AWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGA
                     GSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFH
                     ALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQ
                     WSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM
                     APLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL
                     AALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGDRCDLDTTYRFNSRI
                     GEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL
                     ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES
                     IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVAR
                     KP"
     gene            7271..7717
                     /locus_tag="RHX79_001572"
     CDS             7271..7717
                     /locus_tag="RHX79_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HDV2196761.1"
                     /translation="MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEI
                     TKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQC
                     ISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE"
     gene            7727..9889
                     /gene="yccS"
                     /locus_tag="RHX79_001573"
     CDS             7727..9889
                     /gene="yccS"
                     /locus_tag="RHX79_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309071.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HDV2196762.1"
                     /translation="MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLT
                     IPLTLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLST
                     SGFILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPIYLLAGAVWYNVLTLIG
                     HLLFPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDESQAPLYDLALANGQLMATLN
                     QTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFR
                     FQRLMSMQGQACQQLSRCILLRQPYQHDPHFERAFTHIDAALERMRDNGAPADLLKTL
                     GFLLNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESA
                     LFRHAVRMSLVLCFGYAIIQITGMHHGYWILLTSLFVCQPNYNATRHRLKLRIIGTLV
                     GIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEG
                     FEVALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLERATEANCRYLDAILEQYHQ
                     GRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYIS
                     ALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEALASLKQRMQQLEPRAD
                     SKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA"
     gene            complement(9852..10481)
                     /gene="sxy"
                     /locus_tag="RHX79_001574"
     CDS             complement(9852..10481)
                     /gene="sxy"
                     /locus_tag="RHX79_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRP-S regulon transcriptional coactivator Sxy"
                     /protein_id="HDV2196763.1"
                     /translation="MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVS
                     DGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYS
                     LDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
                     SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE"
     gene            10700..11209
                     /gene="sulA"
                     /locus_tag="RHX79_001575"
     CDS             10700..11209
                     /gene="sulA"
                     /locus_tag="RHX79_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibitor SulA"
                     /protein_id="HDV2196764.1"
                     /translation="MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPM
                     MTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVES
                     MVRALRTGNYSVVIGWLADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSG
                     LKIHSNLYH"
     gene            11566..12618
                     /gene="ompA"
                     /locus_tag="RHX79_001576"
     CDS             11566..12618
                     /gene="ompA"
                     /locus_tag="RHX79_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706879.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HDV2196765.1"
                     /translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGF
                     IPNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLTA
                     KLGYPITDDLDVYTRLGGMVWRADTKANVPGGASFKDHDTGVSPVFAGGVEYAITPEI
                     ATRLEYQWTNNIGDANTIGTRPDNGLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKH
                     FTLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQG
                     LSERRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRV
                     EIEVKGIKDVVTQPQA"
     gene            complement(12693..13145)
                     /gene="matP"
                     /locus_tag="RHX79_001577"
     CDS             complement(12693..13145)
                     /gene="matP"
                     /locus_tag="RHX79_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HDV2196766.1"
                     /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVL
                     LSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQ
                     RLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKHDLQALLGKE"
     gene            13331..15091
                     /locus_tag="RHX79_001578"
     CDS             13331..15091
                     /locus_tag="RHX79_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lon protease family protein"
                     /protein_id="HDV2196767.1"
                     /translation="MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQF
                     ALEQLLHTRASSSFMLAKAPEESEYLNLIANAARTLQSDAGQLVGGHYEVSGHSIRLR
                     HAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
                     LLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE
                     MEPELSEQAIYSEFEDTLQIVDAESVTQWCRWVTFTARHNHLPAPGADAWPVLIREAA
                     RYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDE
                     ILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAE
                     LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA
                     LADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVR
                     HLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQ
                     QEGRHRFPWPLRWLNWFIPN"
     gene            15160..15678
                     /gene="fabA"
                     /locus_tag="RHX79_001579"
     CDS             15160..15678
                     /gene="fabA"
                     /locus_tag="RHX79_001579"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014915875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HDV2196768.1"
                     /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT
                     ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG
                     KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASD
                     LKVGLFQDTSAF"
     gene            complement(15748..15915)
                     /gene="rmf"
                     /locus_tag="RHX79_001580"
     CDS             complement(15748..15915)
                     /gene="rmf"
                     /locus_tag="RHX79_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome modulation factor"
                     /protein_id="HDV2196769.1"
                     /translation="MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGW
                     REAMADRVVMA"
     gene            complement(16171..16734)
                     /gene="pqiC"
                     /locus_tag="RHX79_001581"
     CDS             complement(16171..16734)
                     /gene="pqiC"
                     /locus_tag="RHX79_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HDV2196770.1"
                     /translation="MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNR
                     LLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGW
                     VVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDG
                     YDEMVKVLAGVWSQEAASIAQEIKRLP"
     gene            complement(16731..18371)
                     /gene="pqiB"
                     /locus_tag="RHX79_001582"
     CDS             complement(16731..18371)
                     /gene="pqiB"
                     /locus_tag="RHX79_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HDV2196771.1"
                     /translation="MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPE
                     VTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDT
                     VFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRV
                     ILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTNNVRF
                     WKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKS
                     IQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYR
                     IPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNT
                     PAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRT
                     MKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRL
                     DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ"
     gene            complement(18376..19629)
                     /gene="pqiA"
                     /locus_tag="RHX79_001583"
     CDS             complement(18376..19629)
                     /gene="pqiA"
                     /locus_tag="RHX79_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiA"
                     /protein_id="HDV2196772.1"
                     /translation="MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAW
                     DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTF
                     FLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFV
                     KLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIR
                     QGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIM
                     VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG
                     KRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIM
                     TMFSAMTFDPRLSWDRQPESEHEES"
     gene            complement(19759..21666)
                     /locus_tag="RHX79_001584"
     CDS             complement(19759..21666)
                     /locus_tag="RHX79_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV2196773.1"
                     /translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKST
                     LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYH
                     DISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGG
                     WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN
                     MATRIVDLDRGKLVTYPGNYDQYLQEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVDGKQL
                     VKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA
                     ELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLL
                     LARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW
                     IFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKTEEAAAAKAETVKRSSSKLSYKL
                     QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER
                     WEYLEALKNGG"
     gene            complement(21677..23785)
                     /gene="rlmKL"
                     /locus_tag="RHX79_001585"
     CDS             complement(21677..23785)
                     /gene="rlmKL"
                     /locus_tag="RHX79_001585"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HDV2196774.1"
                     /translation="MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLV
                     YQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTI
                     RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH
                     LRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGL
                     HRGRWGFSGWVQHDEDIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR
                     LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK
                     NQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA
                     EDYANRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTI
                     DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA
                     HLLVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT
                     VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR
                     MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT
                     LSQDFARNRQIHNCWLITAA"
     gene            24029..25138
                     /gene="ycbX"
                     /locus_tag="RHX79_001586"
     CDS             24029..25138
                     /gene="ycbX"
                     /locus_tag="RHX79_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein YcbX"
                     /protein_id="HDV2196775.1"
                     /translation="MATLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGT
                     FITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIA
                     PDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
                     RCPASVKMEQFRPNLVVSGASAWEEDSWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ
                     KHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAA
                     ADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQ
                     LLEGEVTPLKKSAMGDDGTILCCSCVPKTALKLAR"
     gene            complement(25135..25677)
                     /gene="zapC"
                     /locus_tag="RHX79_001587"
     CDS             complement(25135..25677)
                     /gene="zapC"
                     /locus_tag="RHX79_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415466.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapC"
                     /protein_id="HDV2196776.1"
                     /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAF
                     SPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHG
                     EMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
                     MNDRLKPQVNVDSFSLEQAV"
     gene            complement(25851..26861)
                     /gene="pyrD"
                     /locus_tag="RHX79_001588"
     CDS             complement(25851..26861)
                     /gene="pyrD"
                     /locus_tag="RHX79_001588"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDV2196777.1"
                     /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPA
                     KPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFR
                     LVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICME
                     KIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI
                     APDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST
                     EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT
                     HI"
     gene            complement(26972..27709)
                     /locus_tag="RHX79_001589"
     CDS             complement(26972..27709)
                     /locus_tag="RHX79_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HDV2196778.1"
                     /translation="MPARHLYFIMTNTWNRLALLIFAVLSLLVAGELRAGVVVGGTRF
                     IFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKPGT
                     TGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPG
                     DPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQLSVNGKALRNAGVVPPKSQRQTSWCQ
                     AIAPCHVAWRAINDYGGLSAKKEQNLP"
     gene            complement(27675..28190)
                     /locus_tag="RHX79_001590"
     CDS             complement(27675..28190)
                     /locus_tag="RHX79_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415463.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDV2196779.1"
                     /translation="MLKRIIWILFLLGLTGGCELFAHDGTVNISGSFRRNTCVLAQDS
                     KQINVQLGDVSLTRFFHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSI
                     ESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKV
                     NASATFVLHYD"
     gene            complement(28198..28740)
                     /locus_tag="RHX79_001591"
     CDS             complement(28198..28740)
                     /locus_tag="RHX79_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2196780.1"
                     /translation="MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDV
                     ATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAP
                     TLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKST
                     KAGATGGNATAVLYFDLVYQ"
     gene            complement(28752..29822)
                     /locus_tag="RHX79_001592"
     CDS             complement(28752..29822)
                     /locus_tag="RHX79_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2196781.1"
                     /translation="MQIIFGEKCVLLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYI
                     GVNFGVKTLEEEENTAGVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVY
                     LGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGADTRWHICDPGGQRLGGQGASG
                     NSGSFSLKILQPFVGSVVIPPMALARLFECYNIPAGDSCTTTGTSVLVYYLSGTINSL
                     GSCSVNAGETIEVDLGDVFAANFRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSL
                     TATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPDDADSIARMNVYPVS
                     TTGVPPETGRFEATATVRINFD"
     gene            complement(29813..32413)
                     /locus_tag="RHX79_001593"
     CDS             complement(29813..32413)
                     /locus_tag="RHX79_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706863.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis usher protein"
                     /protein_id="HDV2196782.1"
                     /translation="MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFF
                     KDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTE
                     SLDAMGVNTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNAR
                     GYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNS
                     TWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNM
                     LPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVE
                     IKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGP
                     WETTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDVTQAKSTLADQSEHKGQSYRFLY
                     AKTLNQLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSRYYNLFY
                     TKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGVSWNY
                     SKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHITQNLG
                     LTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNY
                     ALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSY
                     RENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLRF
                     GAIATLDGIQTNSGIIDDDGSLYMSGLPAQGAITVRWGEAPDQICHISYQLTEQQINS
                     AITRMDAICR"
     gene            complement(32438..33139)
                     /locus_tag="RHX79_001594"
     CDS             complement(32438..33139)
                     /locus_tag="RHX79_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDV2196783.1"
                     /translation="MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEG
                     EEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFIITPPLFVLNPANENLLRIMYIGA
                     PLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLR
                     CTSSADMVTVSNPTPYFITLTDLKIGGKVVKNQMISPFDKYQFSLPKGAKNSSVTYRT
                     INDYGAETPQLNCKS"
     gene            complement(33222..33764)
                     /locus_tag="RHX79_001595"
     CDS             complement(33222..33764)
                     /locus_tag="RHX79_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415458.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2196784.1"
                     /translation="MKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACT
                     LVAATKDSVVTLPNVSATKLQTNGAVSGVKTDVPIALEGCDVTVTKNATFTFSGTADG
                     VQPTAFANQATTDAATNVALQMYLPDGSTSVTPGTETSNIQLADSAEQTVTFKVDYIA
                     TGKATSGNVNAVTNFHINYY"
BASE COUNT         8186 a         8825 c         8052 g         8735 t
ORIGIN      
        1 atagggggtt agctaaatgc taaccccttt ttcttttgcc tgtcgaaatt ctcagggcgt
       61 tatatttgct taatgacctg ataatccgct gttaaacctg ttccagatca aatgcgtaaa
      121 gatgggtaaa acttctgggt gcccttacgc attatcatta tgctgcttaa ttaattacat
      181 ctgtcataga gagtgactca atggatcgta ttgttagttc ttcacatgac cgtacatcac
      241 tgcttagcac ccataaggtg ctgcgtaata cctattttct gctgagcctg acgctggcct
      301 tttcggcgat taccgcaact gccagtacgg tgctgatgct gccatctccg ggtctgattc
      361 tgacgctggt gggtatgtat ggtttgatgt tcctgaccta taaaacggcg aataagccga
      421 ccgggattat ctccgcattc gcctttaccg gttttctggg ttatatcctc ggacctattc
      481 tgaacaccta tctgtctgcc ggaatgggtg acgtaatcgc tatggcactg ggcggaacgg
      541 cgttagtgtt cttctgctgc tctgcatatg tgctgaccac ccgcaaagat atgtcgttcc
      601 tcggtggtat gctgatggcg ggtattgtgg tggtgctgat tggtatggtt gcgaatatct
      661 tcctgcagct gcctgctctg catctggcga tcagcgcggt cttcattttg atctcctctg
      721 gcgctatttt gtttgaaacc agcaacatca ttcatggcgg tgaaacgaac tatattcgtg
      781 ccacggttag cctgtatgtt tcgctgtaca acatcttcgt cagcctgctg agcattctgg
      841 gcttcgctag ccgcgattaa tctcacccgc aaacactttc atagcctcgc tttatgcggg
      901 gctttgtttt ttgttacact gccgccagtc tgattaaggt agtaataatt atgctgatct
      961 tcgaaggtaa agagatagaa acggataccg aaggctatct caaagaaagc agccagtgga
     1021 gtgagccgct ggctgtggtg attgcagaga acgaagggat ttcgctgtca ccggaacact
     1081 gggaagtggt gcgttttgtg cgtgatttct atctggaatt caatacttct ccggcgattc
     1141 gtatgctggt aaaagcgatg gcgaataaat ttggcgaaga aaaaggtaac agccgctatt
     1201 tataccgact gtttccgaaa ggtccggcta agcaagccac caaaattgct ggcctgccaa
     1261 aaccggtaaa atgtatttaa cggatacgaa aatcggttaa ttcccccgag ggatgatgcg
     1321 gctcgctgag cacccgttct acacgcgcag aacgcgggcc gccactcttt aaccactgca
     1381 ttaatttttc cacctgccct tcttcaccgc aagcaaccac ttccacgctg ccatcgtcaa
     1441 gatttttggc gtacccggtt aaacccagtc ttttcgcttc gtactgtgtg gtgtagcgaa
     1501 atcctacgcc ctgaactcgc ccgtaaaccc aggcaattat gcagactttc gacattgctg
     1561 ctctccttat ccttaatgga cgcgttgcaa atccatggaa aactccggac aatgacgccc
     1621 atttctttgc atcgacagaa aagtaaatta tgagtgtacg tttagtgtta gccaaagggc
     1681 gcgaaaaatc attacttcgt cgccatccgt gggtcttttc cggggccgtt gcccgcatgg
     1741 aaggtaaagc cagcctcggt gaaaccatcg atattgttga tcatcaggga aaatggttag
     1801 cacgcggcgc ttattcgcca gcttcgcaaa tccgggcgcg cgtctggacg tttgacccgt
     1861 ctgagtctat cgacattgct tttttttccc gccgtttgca acaagcacaa aaatggcgtg
     1921 actggctggc gcaaaaagat ggcctcgaca gctatcgttt aatcgccgga gaatctgatg
     1981 gcctgccggg tattactatc gatcgtttcg gtaattttct ggtgctgcaa ctgctgagtg
     2041 ctggggcaga atatcagcgc gcggcattaa ttagtgccct gcaaacgctg tacccggaat
     2101 gttcgattta cgatcgcagc gatgttgcgg tacgtaaaaa agaaggaatg gagctgaccc
     2161 agggccccgt caccggcgag ttgccacctg ccctgctgcc gattgaagaa cacggaatga
     2221 aactgctggt ggatattcag cacggacaca aaacgggcta ctacctggac cagcgtgata
     2281 gccgcctggc tacccgccgc tacgttgaaa ataaacgtgt gctgaactgt ttctcctata
     2341 ccggtggttt cgccgtatcg gcactgatgg gcggttgcag ccaggttgtc agcgttgata
     2401 cctcccagga agcgctggat attgcacggc agaacgttga gctgaacaaa ctggatctga
     2461 gcaaggctga gtttgtccgt gatgatgtct ttaaattgct gcgtacttat cgcgatcgcg
     2521 gtgaaaaatt tgacgttatc gtgatggacc cgccgaagtt tgttgagaat aaaagccagt
     2581 tgatgggcgc gtgtcgtggc tataaagata tcaacatgct ggcgattcag ttgctgaatg
     2641 aaggcggtat tctcctgact ttctcctgtt ccggtctgat gaccagcgat ttatttcaga
     2701 aaatcatcgc ggatgccgca attgatgccg gccgtgatgt acaatttata gagcagttcc
     2761 gtcaggcagc cgatcatccg gtgatcgcta cctatccgga agggctatat ctgaaagggt
     2821 ttgcctgtcg cgtcatgtaa cttgaaatgt ggaattttac ccttatatca aaggtaaaga
     2881 tttcccggga ggtgactatg attgccagca aattcggtat cggccagcag gtccgccatt
     2941 ccctgttagg ttatctcgga gtggtcgtgg atatcgaccc ggtttattcg ctctctgaac
     3001 cgtcgcctga tgagctggcg gtaaatgacg agcttcgcgc cgctccgtgg tatcacgtag
     3061 tgatggagga cgataacggc ctaccggttc atacctacct ggctgaagcc cagctaagta
     3121 gcgaattgca ggatgaacat cctgaacagc catccatgga tgagctggcg cagaccatcc
     3181 gcaaacaact ccaggccccg cgtctgcgta actgatccct gaacgaatcc ccggaaggtt
     3241 tttgccttcc ggggattttt tatttggcca ggcccaggcg agggatctca atagccgggc
     3301 agcgatccat caccacattc aacccggcat cccgtgccag tactgccgct tgctcattaa
     3361 tcacccccag ttgcatccag agggttttcg cgccaatggc aatagcttcc tgtgccacgc
     3421 cccacgccgc ttctgaatta cggaaaacat cgaccatatc gaccttttcc ggaacgtctg
     3481 ccagcgtgcc atacccctgc tggcccagca gcgttttgcc ggcaactttt ggcgaaaccg
     3541 gaatgacgtg atacccctgg tcgagtagat atttcatcac gcgatagctg ggacgatcgg
     3601 gtttgtcgct tgcccccacc agcgcaatgg tgtgagtgga cgttaaaatg cctgcaatat
     3661 cggtttcttt cattatttcc tccagactgt ttaacaaagt gtacgacaaa gccgacatgc
     3721 caaccatgca gctaatacga atgaatgaga gcaaaagcgg gaaatatgtc tatatgttag
     3781 taagtatgat taaagaaaaa ttttgacaca ttattattcg ggcggtcttt tgacaggagc
     3841 tacctatgaa aaccggcatc gtgaccacct tgattgcatt atgtttgccg gtatccgttt
     3901 ttgccaccac gctgcggctt tcaaccgatg tcgatcttct ggtactcgac ggcaagaagg
     3961 tttccagctc tctgctgcgc ggtgcggaca gcattgaact ggataatgga ccgcatcagt
     4021 tagtgtttcg cgttgagaag acgattcatc tttccaatag tgaagaacgg ctgtatatct
     4081 ccccaccgct ggtggtcagt tttaataccc agctcatcaa ccaggtcaat tttcgcctgc
     4141 ctcgcctgga gaatgagcgg gaagctaacc attttgatgc cgcgccgcgc cttgaattgt
     4201 tggatggcga tgcgacgccg attccggtaa agctggatat tctcgccatt acctcaacgg
     4261 caaaaacgat tgattatgag gtcgaggttg aacgctataa caaatccgcg aaacgcgctt
     4321 cactaccgca atttgccacg atgatggcag atgacagtac gctgctttcg ggtgtttccg
     4381 agctggatgc tattccaccg cagtctcagg tgctcacaga acaacggctg aagtattggt
     4441 ttaaactggc tgacccacaa acgcgaaata ctttcctaca atgggcggaa aaacaaccat
     4501 cttcctgaga tttttgtgcc tgtgcgcagg ctttttcggt ctttatcttg cagcgataag
     4561 tgcttacagt aatctgtagg aaagttaact acggatgtac attatggaac tgacgactcg
     4621 cactttacct gcgcggaaac atattgcgct ggtggcacac gatcactgca aacaaatgct
     4681 gatgagctgg gtggaacggc atcaaccgtt actggaacaa cacgtactgt atgcaacagg
     4741 cactaccggt aacttaattt cccgcgcgac cggcatgaac gtcaacgcga tgttgagtgg
     4801 cccaatgggg ggtgaccagc aggttggcgc attgatctca gaagggaaaa ttgatgtatt
     4861 gattttcttc tgggacccac taaatgccgt gccgcacgat cctgacgtga aagccttgtt
     4921 gcgtctggcg acggtatgga acattccggt cgccaccaac gtggcaacgg cagacttcat
     4981 aatccagtcg ccgcatttca acgacgcggt cgatattctg atccccgatt atcagcgtta
     5041 tctcgcggac cgtctgaagt aatattgcac aggtggcaaa cgccacctgt ttcttacggt
     5101 tttctcgcta ccggcacatc cagatttttc agtatttcca caaagggaga gggattctct
     5161 ttgttaaaca gtgcccatac ccgatggcgt gcccgggtca gcgccacgta cattaaccgc
     5221 cgttcttcag cgtccgggaa atcctcaacc ggtggcagta gcgcctcttc cataatcgac
     5281 tcccgcgccg cagccggaaa accatcactc ccctcctgca agccaacgat gatgacgtaa
     5341 tccgcctgtt gccctttgct ggcatgaatg gtcataaagt cgatttgcaa cttcggccag
     5401 cgtgttgccg ctttttccag gctggcaggc ctcatgtgat ggtaacgcgc caggatcaga
     5461 atgcgctctt ccggtttggc ataaccagag agcttatcca gcaaagcgtc aagttgactc
     5521 tcatccaata acgtgacggc ttttttgtct ccattggtta agctgtttag cggctttttc
     5581 agctggcctg ggttctgctg aataaaccgg tttgccacct caccgatacg actgttaaaa
     5641 cggtaagtcg tgtctaaatc acagcgatcg ccttcaccaa agttttcatg gaaagcggtg
     5701 gtgagcgaca tttgcgcacc gctgaatcgg taaatcgcct gccagtcatc accaacggcg
     5761 aacaacgtcg tctgactgtt ttgcttgcgt aatgccgcta acaacgctgc ccgctgcggc
     5821 gagatatcct gaaattcatc aaccagaata tgcttccacg ggctgataaa gcgacctttc
     5881 tccagaatca caatcgcctg atgaataagg cccgaaaaat cgacagcgtt ttctgccttc
     5941 agcgcacctt tccaggcttt taataacggg gccatcaact tgatacgttt actgaacaga
     6001 tcgcgaatct cttcgggtgc actggcaatc atttctgcct gtgcaccacc gtgcatccgc
     6061 atcagactta cccagcgatc gaggcgagag gcaaggcgac gctgtaattt ttcatcatcc
     6121 cagaagttac cttctggcac tgaccactgc atttcttccg tcagccattg ccgccagccc
     6181 ttcgcctgcg ctttcttttc gctgcattgc ttgcgccact cagcaataaa gagttcatga
     6241 cgggcagcgg tatcattttc cagtttgctg actatcggaa cttttttgct gccctgctga
     6301 ataatatgca gcgccagcgc atgaaacgtg cgtgcggtaa tgtcttcggt atgtagccgt
     6361 tcgcgaatcc gctcgtccat ctcttcagcg gctttgcgac caaacgccag caataaaatt
     6421 tgctcagggg acgcttcacc acgcgccagc aaccagcctg cacgggccac cagcaccgac
     6481 gtttttccgc ttcctgcacc tgccagcact aacagagaat gctcgccatt aacgactgcc
     6541 cgggcctgcg ccggattcag cggtgaagac tcgacctggc ggaaaaaatc cgcatactcg
     6601 gtaagcatgg cttcggtata cgcctggtta tgctgcaacc gagcgctttc aatatctttc
     6661 aaccaggcct gacatttacg ccacgcctca cggcagttat cgaattcttc cagtcggtta
     6721 accggcaacg gcaacgccga caaagcctgg cggatttgtt gctgaacgcc agaggtttgc
     6781 tcacgcgtca gccatttatt ttctccagtg cgcgtggcaa tcaaatccag ttgctggcgt
     6841 aaaacaccag acgcaatttc gctcatctcg ccactccacc gccgccagtg agcatcaaga
     6901 tgatggtaaa aacgctgcgt ctcgccccat tcggtgccgt gcagacgcac cactttttcg
     6961 tccggcagta caaattccag ctcgccccat accagaccgc gcttacagtg aatcgccagt
     7021 aattgattga aaggaataag gtattcgtgg cgatcgccgg agactttaat cccggcattg
     7081 aggatcaccg cccgatcgta agggtgctgt gccagacgtt ttccaagcgt tgtcgctttc
     7141 agttccatga ctctgtagat ccacacgaaa ttatttctta tcagtgtaac cgtcagagaa
     7201 aacgtgctcc agcccaaaaa aacgttacaa ttgccgccca ttactgaaaa ccacagtaaa
     7261 gcgaggtttt atgcgtaccg ttttgaacat tctgaacttt gtgcttggcg gatttgccac
     7321 cactctgggc tggctgttgg cgactctggt cagtattgtg ctgattttta ccttaccgct
     7381 gacacgatcc tgctgggaga tcactaaact gtctctggtg ccttatggca atgaagctat
     7441 tcatgtcgat gaactgaacc cggctggcaa aaatgtactg ctgaatactg gcggtacggt
     7501 attgaatatt ttctggctga ttttctttgg ctggtggtta tgcctgatgc acattgcaac
     7561 gggcatcgca caatgtattt caatcattgg cattcctgtc ggcattgcga actttaaaat
     7621 tgccgctatt gcactatggc cggttggtcg tcgcgtggta tcggtagaaa cagcgcaagc
     7681 tgcgcgtgaa gccaatgcac gtcgtcgttt tgaataatcc actaatatgg cctttatgct
     7741 aagtcctttg ctcaaacgct atacctggaa cagcgcctgg ctgtattacg cgcgtatttt
     7801 tattgcgctt tgtggaacca cagcgtttcc gtggtggctg ggtgatgtaa aactgacgat
     7861 tccgctaacg ctggggatgg tggcagcggc gctgaccgat ctcgatgacc gactggcggg
     7921 acgtttgcgt aacctcatca ttacgctgtt ctgctttttt atcgcctcgg cctcagtaga
     7981 attgctgttt ccctggccct ggctatttgc gattggctta acgctctcta ccagcggctt
     8041 cattttgctc ggcggtctgg gtcaacgcta tgcaacaatt gccttcggtg cattgctgat
     8101 cgccatttac actatgttgg gaacatcact ttatgagcac tggtatcagc agccgattta
     8161 tctgctggcc ggtgccgtct ggtacaacgt cctgacactt attggtcatc tgctgttccc
     8221 ggtccgcccg ctgcaggaca acctggcgcg ttgctatgaa caactggcgc gttatcttga
     8281 gctcaagtcg cgcatgtttg atcctgatat tgaagatgaa agccaggcac cgctgtacga
     8341 tttggctctc gccaacggac aactgatggc gacattgaat cagacgaaac tctcgctgct
     8401 gacccgctta cgtggcgatc gtggtcaacg gggaacgcgt cgcacgctgc attattactt
     8461 tgtcgcgcag gatattcacg agcgtgccag ctcttctcat attcagtatc aaacattgcg
     8521 tgaacatttt cgccacagcg acgtgctgtt ccgttttcag cggctgatgt cgatgcaggg
     8581 ccaggcgtgc cagcaactgt cacgctgtat tttgctgcgt cagccttatc aacatgatcc
     8641 gcattttgag cgcgctttta cgcatattga tgctgcgctg gagcggatgc gcgataacgg
     8701 cgcacccgcc gatttactca aaacactggg atttttgctg aacaatttac gcgccattga
     8761 tgcccaactg gcaacaattg aatcagaaca ggcccaggca ctaccccata ataatgacga
     8821 aaatgagctc gctgatgaca gcccgcacgg gttgagtgat atctggctgc gtcttagccg
     8881 tcacttcacg ccggaatccg ccctcttccg tcatgcggta agaatgtcgc tggtgttgtg
     8941 cttcggctac gccatcattc aaataaccgg aatgcatcac gggtattgga tcttgctgac
     9001 aagtttgttt gtctgccagc caaactataa cgccacgcgc caccgcctga agttaaggat
     9061 tattggtacg ctggtaggta tcgccattgg cattcctgtg ctgtggtttg tgccatcact
     9121 ggaagggcag ctggtgctgc tggttattac cggcgtgctc ttttttgcct tccgtaacgt
     9181 gcaatacgct catgcaacga tgttcatcac acttttggtg ctactgtgtt ttaacttact
     9241 gggtgaaggt tttgaagtag cgttacctcg cgtaatcgat acgctgattg gttgtgccat
     9301 tgcgtgggcg gcagtgagct acatctggcc tgactggcag tttcgcaatc tgccgcgcat
     9361 gctcgaacgc gccacagagg ccaactgtcg gtatctcgat gccatactgg agcaatacca
     9421 tcaggggcgt gataaccgtc tggcgtatcg tattgcccgc cgcgatgcac acaaccgtga
     9481 tgctgagctg gcgtcggtgg tatcaaatat gtccagcgag ccgaacgtta ccccgcaaat
     9541 tcgcgaagcc gcgtttcggt tgctgtgcct taaccatacg tttaccagct atatctcagc
     9601 cctcggtgct caccgggagc agttaactaa tcctgaaatt ctggcgtttc ttgatgacgc
     9661 agtttgctat gttgatgacg cgttacatca tcaacctgct gatgaagaac gcgtcaatga
     9721 ggcattagct agcctgaaac agcggatgca gcaacttgaa ccacgggcag acagcaaaga
     9781 acctctggtc gtacaacaag ttggattatt gattgcatta ctgcctgaga ttggtcgtct
     9841 gcaacgccag attactcaag ttccgcagga aactcctgtt tcggcgtaag agagtcagcc
     9901 cattctgcaa gctcctggcg gcgtgccacc gggagcgcag cttcatgaat gccgataatg
     9961 gcaccttcaa gcataaacag aatcttttct gtcaccagac tgttttgctg ccgcagtcgc
    10021 aaccaacaca tttttgcccc aagtatacgt aacgcccgta catccttaat ccccacctcc
    10081 ccgagaatcg cttccagatg aaaagacata ttgggcaaat ctttcagtct ttcccgggta
    10141 ttgcgcgtgc ttttctcttt cagcgctgca tcgagagaat atttcgacag acgcaccagc
    10201 ttcagttgat ttcgccatag actttcatca acccgatagt aattgagggt aacggatcgg
    10261 ccacactttt tatatgtcag ccagacaggc ggatgtttta cacagtactg tgcactttgc
    10321 tcacaagccc gaagatacaa ctcaccatca gaaaccatcg caaacaccgt gtcgtcaacg
    10381 gtcaggctgt aactgccaaa caatgatcgg tattcaattg tgcccaacgt tgccaggtat
    10441 tcttgtgatt tatagatccg cttataggag aggcttttca taaaattcct tttaaaatca
    10501 taacataaaa gaatgattca cattaacgga tccgttaact acgaaaatag gcaacttatt
    10561 cttaaggggc aagattaatt tatgttttcc cgtcaccaac gacaaaattt gcgaggctct
    10621 ttccgaaaat agggttgatc tttgttgtca ctggatgtac tgtatatcca tacagtaact
    10681 cacaggggct ggattgatta tgtacacttc aggctatgca catcgttctt cgtcgttctc
    10741 atccgcagca agtaaaattg cgcgtgtctc tacggaaaac actacagccg ggcttatcag
    10801 tgaagttgtc tatcgcgaag atcagcccat gatgacgcaa cttctactgt tgccattgtt
    10861 acagcaactc ggtcagcaat cgcgctggca actctggtta acaccgcaac aaaaactgag
    10921 tcgggaatgg gttcaggcat ctgggctacc cttaacgaaa gtaatgcaga ttagccagct
    10981 ctccccttgc cacactgtgg agtcaatggt tcgcgcttta cgcacgggca attacagtgt
    11041 ggtgatcggt tggttggcag atgatttgac tgaagaagag catgctgaac ttgttgatgc
    11101 ggcaaatgaa ggtaacgcta tggggtttat tatgcgtccg gtaagcgcat cctctcacgc
    11161 cacgagacaa ctttccgggc taaaaattca ctctaatttg tatcattaag taaatttagg
    11221 attaatcctg gaactttttt tgtcgcccag ccaatgcttt cagtcgtgac taattttcct
    11281 tgcggaggct tgtctgaagc ggtttccgcg attttcttct gtaaattgtc gctgacaaaa
    11341 aagattaaac ataccttata caagactttt ttttcatatg cctgacggag ttcacacttg
    11401 taagttttca actacgttgt agactttaca tcgccagggg tgctcggcat aagccgaaga
    11461 tatcggtaga gttaatattg agcagatccc ccggtgaagg atttaaccgt gttatctcgt
    11521 tggagatatt catggcgtat tttggatgat aacgaggcgc aaaaaatgaa aaagacagct
    11581 atcgcgattg cagtggcact ggctggtttc gctaccgtag cgcaggccgc tccgaaagat
    11641 aacacctggt acactggtgc taaactgggc tggtcccagt accatgacac tggttttatt
    11701 cctaacaatg gtccgaccca cgaaaaccaa ctgggtgcag gtgcttttgg tggttaccag
    11761 gttaacccgt atgttggttt tgaaatgggt tacgactggt taggtcgtat gccgtacaaa
    11821 ggcgacaaca tcaacggtgc atacaaagct cagggcgttc aactgactgc taaactgggt
    11881 tacccaatca ctgacgatct ggacgtatac actcgtctgg gtggtatggt atggcgtgca
    11941 gacaccaagg ctaacgtacc tggtggcgca tcctttaaag accacgacac tggcgtttct
    12001 ccggttttcg caggtggtgt tgagtacgcg atcactcctg aaatcgctac ccgtctggaa
    12061 taccagtgga ccaacaacat cggtgacgca aacaccatcg gtactcgtcc ggacaacggt
    12121 ctgctgagcc tgggtgtttc ctaccgtttc ggtcagggcg aagcagctcc ggtagttgct
    12181 ccggctccag ctccggcacc ggaagtacag accaagcact tcactctgaa gtctgacgtt
    12241 ctgttcaact tcaacaaagc aaccctgaaa ccggaaggtc aggctgctct ggatcagctg
    12301 tacagccagc tgagcaacct ggatccgaaa gacggttccg tagttgttct gggttacact
    12361 gaccgcatcg gttctgacgc ttacaaccag ggtctgtccg agcgccgtgc tcagtctgtt
    12421 gttgattacc tgatctccaa aggtatcccg gcagacaaga tctccgcacg tggtatgggc
    12481 gaatccaacc cggttactgg caacacctgt gacaacgtga aacagcgtgc tgcactgatc
    12541 gactgcctgg ctccggatcg tcgcgtagag atcgaagtta aaggcatcaa agacgttgta
    12601 actcagccgc aggcttaagt tctcgtctgg tagaaaaacc ccgcagctgc ggggtttttt
    12661 tcgcctttag taaattgaac tgacttcgtc agttattcct tacccagcaa tgcctgcaga
    12721 tcatgcttca aagaagacat tttattcgcg tatttctctt tgttttccgc atcttcaatc
    12781 agctgaacaa tcgtttcaga aagcgtttta ccgcgacgct gcgcaagacc agccagacgt
    12841 tgccagacaa taaattccag atcgatcgat tttttgcgcg tatgctggtg ttccgcatta
    12901 aaatggcgct tccgtctggc ccgaatggtt tgcttcatgc gattgaccag ttccggattc
    12961 atatgcttgt caatccagcc atttaccagc acgggttcat tttccagcga gagcaacaca
    13021 tcgacggctt cctgggcggc actggcttct atgtaacggg tgattaactc cccttcgcga
    13081 tgcttcttca ccagatactt ccatttccaa ccgctttcaa gattttcaag ttgttgatat
    13141 ttcatagcga tctcaatgtt accgtgtaac tctttacaga atatcagctt tttaggccag
    13201 tgaagaaaag aatctccatc ctgtgagctt taacgcccat gccaggagta ttgtcggtgc
    13261 tttctacgtg tgctgtagtg ccggttacgg tataatcgcg gctttgacaa cagactaaaa
    13321 aacatcaact ttgaccatta cgaaacttgc atggcgtgac ctggttcctg ataccgatag
    13381 ctatcaggaa atatttgctc agccacattt gattgacgaa aacgatcctt tattcagtga
    13441 tactcaaccg cgactgcaat tcgcactgga gcagttgctg catacgcgag catcctcctc
    13501 ttttatgctg gcgaaggccc cggaagagtc tgagtatctg aatcttattg ccaatgccgc
    13561 gcgtacgcta caaagcgatg caggccaact ggtgggcggt cactatgagg tttccggcca
    13621 ctccatccgc ttacgtcacg cagtgagtgc agatgataat tttgcgactt taacgcaagt
    13681 tgtcgctgcc gactgggtag aagcggagca actctttggc tgcctgcgcc agtttaatgg
    13741 cgacattacc ctgcagcctg gtctggtgca tcaggcaaat ggcggtattc tcatcatctc
    13801 tttgcgtaca ctgctggcgc aacctctgct gtggatgcgg ctgaaaaata tcgttaaccg
    13861 cgagcgtttt gactgggttg cgtttgatga gtcgcgccct ctccccgtct ctgtgccttc
    13921 gatgccattg aagctgaaag tcattctggt aggcgaacgc gaatcattgg ctgatttcca
    13981 ggagatggag ccagagcttt cagagcaggc tatttatagc gaatttgaag atactctgca
    14041 gattgtcgat gcggagtcag taacccagtg gtgtcgctgg gtgacattta ccgccagaca
    14101 taatcactta cctgcaccgg gagcggatgc ctggccggta cttatccgcg aagcagcacg
    14161 ctacaccggt gaacaagaaa cacttccgct tagcccgcag tggatcctcc gccagtgtaa
    14221 agaggtcgcc tccctgtgtg atggcgacac cttctccggc gagcagctaa acttaatgct
    14281 gcagcagcgt gaatggcgcg aaggtttcct cgctgaacgt atgcaggatg agatccttca
    14341 ggagcaaatc ctgattgaaa ccgaaggcga acgcatcggg caaattaacg ccctttcggt
    14401 cattgaattt ccgggtcatc cacgcgcttt tggcgaacct tctcgcatta gctgcgttgt
    14461 gcatattggc gatggtgaat tcaccgacat cgaacgcaaa gcggagcttg gcggcaatat
    14521 ccatgcgaaa gggatgatga tcatgcaagc gttcctgatg tcggaactac agcttgagca
    14581 acagatcccc ttctcagcat cgctgacatt tgagcagtca tacagtgaag ttgatggaga
    14641 tagtgcctcg atggctgaac tctgcgccct gataagcgcc ctcgccgatg tgccggtgaa
    14701 tcagagtatc gctatcacag gttcagtcga tcagttcggt cgcgcccagc cggtcggtgg
    14761 tttaaatgag aaaatcgaag gcttctttgc tatttgccag caacgtgagt taaccgggaa
    14821 acaaggtgtc attatcccca cagctaacgt tcgccattta agtcttcaca gtgaactggt
    14881 gaaagcggta gaagaaggca aattcaccat ctgggcagta gacgatgtga ctgacgcact
    14941 gccgttatta ttaaatctgg tgtgggatgg cgaaggccaa acgacgctga tgcaaaccat
    15001 ccaggaacgt atcgcgcaag catcgcaaca ggaaggacgt caccgttttc catggccatt
    15061 acgttggctg aactggttta ttccgaactg atcggacttg ttcagcgtac acgtgttagc
    15121 tatcctgcgt gcttcaataa aataaggctt acagagaaca tggtagataa acgcgaatcc
    15181 tatacaaaag aagaccttct tgcctctggt cgcggtgaac tgtttggcgc taaaggcccg
    15241 caattgccag caccgaacat gctgatgatg gaccgtgtgg tcaaaatgac cgaaacgggt
    15301 ggtaacttcg acaaagggta tgttgaagca gaactggata tcaatccgga tctgtggttc
    15361 ttcggatgcc actttattgg cgatccggtt atgccgggat gcctgggcct ggacgcaatg
    15421 tggcagctgg tagggttcta cctcggctgg ctgggcggcg aaggtaaagg ccgcgcgttg
    15481 ggcgttggcg aagtgaaatt cactggtcag gtactgccga cagcgaaaaa agtgacctac
    15541 cgtattcact ttaaacgcat tgttaaccgt cgtctgatta tgggcctggc ggatggcgaa
    15601 gtgctggttg atggtcgtct gatctatacc gccagcgacc tgaaagtcgg tctgttccag
    15661 gatacgtctg ccttctgatt ataatcagac agagtatcaa aaggcgaaac ctccgcaatg
    15721 cggaggtttc tttttaaaga gacagaatca ggccattact accctgtccg ccatggcttc
    15781 tcgccagcct cccagccatt gtgacctttg attcagcgtc tgatagggac acatttcttt
    15841 tgagcgtccg gcgatgccgg cctgataacc acgttgatgt gcccgttcca ggcgatctcg
    15901 tttttgtctc ttcatgcctc gtttccctca tactggtttc tggtggaaaa gaaaacagtg
    15961 attactaaat gtgcaatcac agttaagcaa taccgcgaat cataactgcc gtcaatgcgc
    16021 aaaattcacg ccactgtcat atttgtgagc tacacgggca tgtcggttgt acaaaaaatg
    16081 tgaagaggaa caaatttttc cgcacgttag agacaaaaaa accgcctcag gcaacatacc
    16141 ggagacggtt atatttacaa atctttataa ttaaggtaga cgctttatct cttgtgcaat
    16201 agaagcggct tcctgactcc agacaccggc cagcacttta accatctcat cgtaaccatc
    16261 ctgagtttgc actccttcca gacggaacgg acgtttgatc agttgtccct ggtggttcaa
    16321 cagccactca ccactgacaa tgaccttgcc atcatagcga ccgttaaact ccgttacggt
    16381 aacattgagc gtgtcctggg cgcttcccag aggctgggag gcaaccaccc agccgggcag
    16441 ttgcgtactc aggttggcaa ccagggtgtt gcgcaactgt tgatccaacg ggctggccca
    16501 caagttgttg ttggcaatca catacttcac atcactggtt tgataaacca caccattccc
    16561 cgccagatag tcaggaacag tgacctgctc tacccataac agacgattgc cctggctggc
    16621 ggtactttgt gtaccgctct gcaccacagg taactggtaa tagtttttat taatttcgcc
    16681 ggagctgcat ccggccagcc acagtgctgc aatcgtcact agccactttt tcattgtttc
    16741 gccctcttcg gctctggatc ttttttgtcc ttcgcttcaa ataccagcgc gttactcttc
    16801 tcattgagcg ttttcagcac cggttgcagt tctcgcaaca cctgatcaag gcgctgcata
    16861 tccgccacca tcttgttgta ggctgcggag ccaggctgga agccctgcat gctgcgattc
    16921 aattcacgca acgttgactg catatccgtc ggcaactgct gcatcgactg gctagcgagg
    16981 atcttgttca tgctatccag cgtcgtttgc aggtttttca ttgtgcgctg actttcagaa
    17041 agcgtactgg ttgcctgttc aatcatcgga ttcaatggca gtttgttgat cttatccaac
    17101 gcttccatca gtcgttgctg gatttgcgcc aggccgccgc taacggtcgg gataatctga
    17161 taaccattaa attcacgaat accggttatt gcaggcgtat ttggatagaa atcgagatca
    17221 acatacagtg caccagtgac caggtttccg gttttcagcg atccgcgtaa accacgtttc
    17281 aacaattcgc caaggtgctc aacaacatcc gcattttcgc caagctgcat tttcagccgc
    17341 tctggctcga tacgaatcag taccggaata cggtaatcat cgttaaatgt ctgacgcata
    17401 ttcggcgcaa agaatggcac tttgcttacg gtacccaggc gaataccccg gaactctacc
    17461 ggagctcccg gttgcagacc gcgtaccgaa tctttaaaga acatcagata atcaatgtga
    17521 tcggtgtaca acgaatcctg aatgctcttc tgatcatcat acaaaacgaa agctgttttc
    17581 ggtgccactg gctgccctaa atccagacct tccggcacat caaagctgac accgccactc
    17641 agcagcgttg tcaatgagcc catctccaca cgcatccctg ctgacgtcag atcaaccgca
    17701 atgccactat ctttccagaa gcgaacattg ttggtcacca gtcggtcata aggtgcattg
    17761 atgaacagtt gatagctgat attgcgtttt tgtgtatcga aggtgctggt ttcaaccgaa
    17821 cctacccgat agccacggaa cagcaccgga tctcctggcg agagctgccc ggcttttttg
    17881 ctatcgagaa tcacacggat acctttcgca tcaggcgggg ccaacggtgg cgagtccagc
    17941 aaatcgtatt tatccatttt gctgcctttc gcgcctggct gcagttcgat ataaactcca
    18001 gacagcagcg ttcccaggcc gctaatccct tcgcgaccaa tctgcggttt caccacccaa
    18061 aagacggtgt ctttatgcag caatttttcc ataccggaat tcagccgcgc tttgatttca
    18121 acgtgcgtca aatcatcagc cagtgtggcg ctttcaacca cgccgacgtc aacgctacgg
    18181 cttttaatgg tggttttgcc accttcaatt ccttccgcat tcgcggtgat cagggtcact
    18241 tccggtccct gatggctgta atgataaaaa agaacccagg ccccaatgag cgccgtgacg
    18301 ataggaaata tccacacggg agaccagttc ttcactttct ggattttggc ttccccatta
    18361 ttagattcca tactgtcagg actcctcatg ctctgattca ggttgacgat cccacgacaa
    18421 acgcgggtca aacgtcatag cagaaaacat tgtcattatg acgactaaag caaacattaa
    18481 tgcacccatt gccggataaa tactcattaa acctcccata cgcaccagcg ccgagagcac
    18541 cgcgataacg aaaacgtcaa tcatcgacca gcggcctaca aactcaacaa cttcataaat
    18601 caaatgcatt ctttcactgt cgcgcttgcc atgccctttg gcatcccaac acagccacgc
    18661 gatggcgatc atctttaacg ttggcaccat aatactggcc agaaagatca ccgcagcgac
    18721 gggataagag ccttcgctcc ataacagaat gaccccagcg agaatcgtcg acggcatctt
    18781 cgagcctaat aaatccgtca ccatgatggg caaaatatta gccggaagat acagcatgat
    18841 ggacgttaca agcagcgcga gtgtccactg caggctgttt ctacgccgaa cgtacccttt
    18901 ggtactacaa cgcgggcaca cgggttcatc agcaggaagg attgccgtac aacaggagca
    18961 cgaacgcagc ccctgacgta tccccgtgac gcctggtttt agcggctggc gcagttctgg
    19021 catcggggcg atgtcgtccc ataaccagcg acgatcaacg cactgaaaag cgcgcagttg
    19081 caggacacaa aataaacacc aggggagaaa gctgctgcct accccaatgc tgccgtaagc
    19141 catcagttta acgaaactga ccagcacacc agcgaggaaa atctccgcca ttccccaggt
    19201 tttgagttga aaaagcaccc gtgccagttg ctcttttaaa cgcaccggta attccgcgcg
    19261 attcaccagt aacagaatgg ttatcagaca aaacgcggga accagttgca caaacaacag
    19321 gaaaaaggtg ccgaggctgg cgtagtcctc agaaaaaagc acgccgggaa tttccagtaa
    19381 tgtaatttca ctggtaactc ctgcaacgtt catattcaca aaaggaaaca agttggacag
    19441 caacagcatg aacagtgcag ccaacgcata ggcggtggga cgctgccgag gggcatccca
    19501 cgccacggtt aacgttgtgc cacaccgggg acatgccgct ttctgaccat gctcaaggcg
    19561 cggtaacgcc accagcatgt cacactgcga gcacaggatg tgcttcgcgg catgatgatg
    19621 ttcgcacatt ggtactcctt aatgatgcgc tattttacag atgactaaca aagtgttggt
    19681 tttcatgcct gataaaccca gttcatcagg caattttacc gttgtcagct gtctctgttt
    19741 aaatcgacta ttttgcgatc agccaccatt ttttaacgct tcaagatact cccagcgttc
    19801 aaaggcttgc tccagctcct gctctgcagc agccatatcg gcgagcactt tttgtgtctg
    19861 ctcatgtggc tgactgaaga aggaagcatc cgccacctgc gtctgtaggg cttccagctt
    19921 cgcctccaga tcttcgagca attgcggtag ctgctccagt tcgcgctgca atttatagct
    19981 tagtttgcta ctgctgcgtt ttacagtttc tgcttttgcc gcggcggctt cttcggtttt
    20041 tttcaccgca ggctgtttga gcgccacata ctgctcttgc tgaccacggg catcatgata
    20101 accgccgaca taacgaccaa ttttaccgcc gccttcgaag atccaacatt ctgtaacggt
    20161 gttatcgaca aactgacgat cgtggctaac cagcaatacc gtgccctgat agctgtcgat
    20221 cagttcttcc agcagttcca gcgtttcgac atcaagatcg ttggtcggtt cgtcaagaat
    20281 caataagttg cttggtttga ggaacaaacg cgccagcagc aagcggttcc gctcaccgcc
    20341 agaaagcgca cgtaccggcg tcatcgcccg tttcggatgg aacagaaagt cctgcaaata
    20401 gcccaatacg tggcgtggct tgccgttaac catcacctct tgcttacctt cggcaaggtt
    20461 atccatcacc gttttatcgg gatccagttc cgcgcggtgc tgatcgaaat aagccacttc
    20521 cagtttggtg ccaacgtgaa tacgcccgct gtccgcttga agctgaccga gcatcagttt
    20581 cagcagcgtg gttttgccgc acccattcgg accaatcagg gcaattttgt cgccacgtag
    20641 aacctgggcc gaaaaatctt tcaccagttg cttaccgtca acctggtagc aaacgtcttc
    20701 catttcgaaa acgatcttac cggagcggct ggcctcttcc acctgcatct ttgcggtacc
    20761 catcacttcg cgacgttcac cacgctcgcg acgcattgct ttcagggcgc gtacgcggcc
    20821 ttcattacgg gtacggcgtg ctttgatccc ctggcgaatc cacacttctt cctgcgccag
    20881 tttgcgatcg aactcggcat tttgtagttc ttccacgcgc agggcttctt ctttttcctg
    20941 caggtactgg tcgtaattcc ccggataggt caccagcttg ccgcgatcga gatcaacaat
    21001 gcgcgtcgcc atattgcgga taaacgaacg gtcgtgggag atgaaaataa tcgtcccatt
    21061 gaaggtttta aggaaccctt ccagccagtc gatggtttcg atatccagat ggttcgtcgg
    21121 ttcgtccagc agcaatacgc gcggattgct caccagcgcg cgtcctaatg ccgctttacg
    21181 caaccagccg ccggaaagcg acgacagcgc aacattagga tctaacccca gttgcgccag
    21241 cacttcgttg atgcggtttt ccagctgcca caagttgtgg tgatccagct gttcctgaac
    21301 cttcgccagt tcgttgagat ttttctcgct cgggtcgttc atcaccaggc gcgaaatatc
    21361 gtgatagcgt ttcagatatt ccgcttgttc ttcaatgcct tcggcaacga aatcataaac
    21421 gctaccctca acgttacgcg gcggatcctg ttgcagacga gctacaatca aatcttgctc
    21481 gtaaataatg cgaccgtcat ccagcccttg ttcacggttg aggattttca ttaacgtcga
    21541 tttgcccgcg ccgttgcggc ccaccagaca aacacgttcg ttatcttcga tatgcagttc
    21601 tgcgttatcg agaagcggcg cgtcgctgaa cgacagccat gcgccatgca tactgattaa
    21661 tgacattact attcctttag gctgcggtaa tcagccagca gttgtggatc tggcggttac
    21721 gggcgaaatc ctgggagagc gttttttgcg taatttcttg tgctttcagt cccagttttg
    21781 ccaggccgtc gagatccata cggaagccac gtttattgtt cgagaacatg atcgtcccac
    21841 ctgcacgcag cagacgtttc aaatctttca tcagcgccag atgatcgcgc tgaacatcaa
    21901 acgcatcttc cattcgtttt gagttagaga aggttggcgg atcgataaag atcagatcga
    21961 actgttcatt tgcctcacgc agccacgcca ggcaatcggc ctgaatcagg cgatgcgcac
    22021 gcccggtcag gccattcaaa cgcaggttgc gttctgccca ctccagataa gtacgcgaca
    22081 tatccacggt ggtggtgctg cgtgcaccgc ctaatcccgc atgcacggtg gcgctgccgg
    22141 tataagagaa caggttgagg aaatctttgc ctttgctcat ctgaccgagc atacgacggg
    22201 cgatacggtg atcgagaaac agaccggtat cgaggtaatc cgtcaggttc accaacaagt
    22261 gagcgttata ttcggtaact tcaagaaact cgcccttctc gcccagtttc tggtactgat
    22321 ttttgccctt ctggcgttca cgggttttca gcaccagttt gtttggcgca atccccagta
    22381 ccgaaatggt tgcagcgata atatcgaaca gacgctgacg cgctttgtga gcatcaatag
    22441 tttttggcgg cgcatactcc tgcaccacca cccagtcggc ataacggtca acggcaacgt
    22501 tatattccgg tagatcggcg tcatacaggc ggtaacattc aattccttcc tggcgagccc
    22561 acttctcgaa ttttttgagg ttcttacgca ggcggttggc gtagtcttcc gctaccatcg
    22621 ccggtttgct gtctggagtg ctttcggcaa cgtggtaatt tttctgtacg cagtccagcg
    22681 ggccgttttt cgccttgtac tgtttgtctg cacgcagctg caagcagctt agcagatccg
    22741 gcgaggcact aaacaaagag agattccagc caccaaactg gtttttcatg atccgaccca
    22801 gcaggctatg cagcgcaatc agcgccggtt cgctgtccag acgttccccg tatggcgggt
    22861 tgctcaacac tgtgccgtac ggccctttcg gcagcggatt ggtcagttgc gcgacatctt
    22921 tcacctcaaa ggtgatcagt tcaccaatcc ccgcaagacg ggcgttagtg cgcgcacgtt
    22981 gaatcacccg tgcgtcgctg tccgaaccgt aaaaatgaga gctatactca gccaggcctt
    23041 tacgggcacg agtttgcgct tccgctttca cttcctgcca gatatcttca tcatgctgca
    23101 cccagccgct aaagccccaa cgcccacggt gcaagcctgg tgcgcgatcg gtcgctagca
    23161 tcgccgcttc aatcagcaac gtaccggaac cacacatcgg atcgagcagc ggtgttcctg
    23221 gctgccagcc ggatcgcatc acaatagcgg ctgccagggt ttctttgatc ggcgcaatac
    23281 cagcacgatc gcgatagcca cgcagatgta aaccatcacc actcagatca agagcgatac
    23341 tggcggtttc tttatgcagc cagacgttaa cgcggatatc cggcgcatcg cgatcaacat
    23401 ttggacgcgg cagatttttc cgcgtgaaag catcgacgat cgcgtctttc actttcatcg
    23461 cgccgtactg actgttgcgg atggtgtcat tcaaaccact gaagtggaca gcgaaggtcg
    23521 cgccaggatt aaacatctct gtccagttga tcgcctgaac accgagatag aggtctaaat
    23581 cgctgtaaac cttacactcg cccagcggca acataatacg cgaggccagg cggctccaca
    23641 tcaggctctg gtaaacaagc cgtgtgtcgc ccttgaaatg gaccccaccc tgaaccacct
    23701 ggcattcaac ggcccccagg ttttccagtt cagtttttaa cagctcttcc agcccacggg
    23761 ccgtactggc aaacagagaa ttcatatcgt cacttttact ctaagagcct accgcagtag
    23821 gcgtaattgt tgcagtcagt ctggacatgg acagcgcgga gaaaccggag cgtacacaag
    23881 tacgtgagga tttcgagcac aacccagggc caaactgaca aataaaatag cctaatggga
    23941 caggcgctaa gaaaattgtt gcgcattata gctaataagc gcgtcatgtc ataaagttga
    24001 gggcttattt tcatttgagg accgcaccgt ggcgacatta acccggcttt ttattcatcc
    24061 tgttaaatcg atgcgcggca ttggtcttac acatgctctg gctgatgtca gtggtctggc
    24121 cttcgatcgc atctttatga tcacggaacc tgacggtacg tttattaccg ctcgccagtt
    24181 tccccagatg gtacggttta ctccttcacc tgtgcatgat ggcttgcatc tcaccgcacc
    24241 agatggcagt agcgcatatg ttcgttttgc tgatttcgcc acacaagacg caccaaccga
    24301 agtttggggc acacatttta ccgcgcgaat tgcgccagac gcgatcaaca aatggctaag
    24361 tggatttttc tcccgcgaag tgcaattacg ctgggtgggg ccacaaatga cccggcgcgt
    24421 gaaacgccac aacactgtac ccctgtcatt tgctgatggc tatccttacc ttcttgctaa
    24481 cgaagcctcg ttacgtgatc tccaacaacg ttgtccggcc agtgtaaaaa tggagcaatt
    24541 ccgccccaat ctggtggttt ccggcgcgtc agcctgggaa gaagatagct ggaaagtgat
    24601 tcgcattggt gatgtggtgt ttgatgtggt taaaccttgt agccgctgta ttttcaccac
    24661 cgtcagccca gaaaaagggc aaaaacatcc ggcaggcgaa ccattaaaaa cattgcaatc
    24721 tttccgcact gcccaggata acggcgatgt cgattttggt cagaatttaa ttgcccgtaa
    24781 tagcggcgtg attcgcgttg gcgatgaggt ggaaattctg gcaacggctc cggcaaaaat
    24841 ttacggcgca gctgccgctg atgataccgc caacatcacg caacaaccgg acgcaaatgt
    24901 agatattgac tggcagggac aggcatttcg tggaaataac caacaggtgt tgctggagca
    24961 attagaaaat cagggaattc gtatccctta ttcttgccgc gcgggcattt gtggaagttg
    25021 ccgtgttcag cttttagaag gcgaagtcac gccgctgaaa aaatcagcaa tgggcgatga
    25081 tggcaccatt ctttgctgta gctgtgtacc gaagactgca cttaagttgg cgcgttagac
    25141 agcctgttcg aggctgaagc tgtcaacatt aacctgcggt ttcagcctgt cgttcatgat
    25201 tttaatggcg tcgcccaact gcatcgcgcg acccgcaata acaacgcagg gttgtgccag
    25261 caggcatagt gcggcatttt cgccagattc aacgaccagc aaattgacct gctcgtgagt
    25321 atcgctcaac caaacgcagg ccgcatcgcc cggcatgggc acccacattt caccatggga
    25381 aacaaaatgc cagcttttcg gcatttgcgg tttgagatag cgaattgcta ccagtgcatt
    25441 cagcaccagt tcggcttttt gttctttaga taaattaaaa tcgcggcact tttcttcaaa
    25501 agagaaatag agcgcggcgt cgtcaacgca aaagcctgcg ggagaaaagg catctggagt
    25561 caacatcttg cgcgcaaaac gtgagcgaaa tagcatacca ttggctaaat cgagcatcat
    25621 tcgatcgtgc tcttcatcgt aataccaacg ccagttatcg tctggtttaa ttcgcatctg
    25681 cctctcccct accctataaa accgcagcaa cacaatccat tgtcgcttcg cttaataacc
    25741 tcaacaataa aagtacaaaa tgtctaaata agcaacagcg atgaatataa aacaaccagg
    25801 gctgaaaata aagccctgat tatcttataa agaggaattc gaagaaataa ttagatatgg
    25861 gtaacgattt ctttaatcag cggcggacct ttaaaaataa aaccagaata aatttgcacc
    25921 agtgaggcac ccgcagcaat cttttcacgc gcagcgataa ccgagtcgat gccgccaaca
    25981 ccgatgatcg gtaagcgacc gtttaattcc agtgacaagc ggcgaataat ttcggtgctt
    26041 tttaactgaa gcggacgacc acttaagcca ccggtttgat cgcaattttt cattccctga
    26101 acaagagaac gatcgagtgt ggtattggtt gcaataacgc catcaatatt atggcgaact
    26161 aaactatcgg caacctggat caattcttct tcagaaagat ccggcgcgat cttcactgcg
    26221 atcggcacat atttatggtg catcgcttgc aaatcatttt gcttattttt aatcgcggtt
    26281 aagagatcat ccagcgcttc accatattgc agcgtgcgta atcctggggt attcggcgat
    26341 gaaatattga tggcgatata tcccgcatag gcatagattt tttccataca aatcagatag
    26401 tcatctttgc cctgctccac tggcgtatct ttatttttgc cgatgttaat acccaggacg
    26461 ccgtcataat gggccttttt tacgttctct acgaggttat caacgccaag attattaaag
    26521 cccatacggt tgatcaaacc ttcggcatct accagacgaa agagacgcgg cttgtcatta
    26581 cctggctgtg gacgtggcgt gacggtaccg atctcgatcg atccaaatcc catcgcgcct
    26641 aacgcgtcaa tgcactcccc gtctttatca agaccggctg ccagaccaag cggattttta
    26701 aacgtcaggc ccatgcagtt aacaggtttc gcaggcactt tctgccgcac cagtgcttca
    26761 aacggcgttc ctgtaatacg gcgtaattgc tgaaaagtaa actcatgagc gcgctctgga
    26821 tcgagctgga aaagggcttt acgaacgaag gggtagtaca tgaactctcc tggattcccg
    26881 gtgtgcaaac cgggggcgta ttatgtgcga gttcggacca aaagggaatt gacctgcggc
    26941 aaaaaaaacg caaacgtttt ccgaacctgt ttcagggcag attttgctcc ttctttgcac
    27001 tcaacccgcc gtaatcattt atcgcccgcc aggcgacatg acacggtgcg attgcctgac
    27061 accagcttgt ctgacgctgg cttttaggcg gcacaactcc cgcatttctt aacgctttac
    27121 catttacgct caactgaatc aggttaatgt agtaaggcgt tgggttagtg agttgtacac
    27181 cctgcgaatt ccgtgtccag cgtaattgtt gataagcttc cagcgggtcg cccggcaaac
    27241 cttcgggtcg ccagaacagt ttaaataccg agcgcatcgc cacttttacg ctctgatttt
    27301 caactttgcc ggatggcacg ctggcaatgc ttaactcaaa tagcgtttcg cgatccacag
    27361 gcaagatgtc gctttccgtt ctcagcaagc gcaacgtgcc tgtagtaccg ggcttcagga
    27421 gaataagtgg cggagcggcc agtaatggtg ctggcactgt cgacgcttcc cccccggccc
    27481 aacgcgttgg gcggttgatt ttactgttaa taagccagga ttcctgactg gtattagtca
    27541 gtaaaataga tatcgattct ctgtctgccg gaaagataaa tcgcgttccg ccgaccacca
    27601 ctcctgcccg caattcaccc gccaccagca gcgataaaac ggcgaaaatc aagagcgcca
    27661 atctgttcca cgtattagtc ataatgaagt acaaatgtcg cgctggcatt cactttaccc
    27721 gactgcacat cgctattgac aggtcgcaat tgcgcataaa aagttaatgg caccttaccg
    27781 ctatgtaggc tgtagtcttt actcgcctgg ttaagcggaa tcaatatctt cgcatcatcc
    27841 agaatcgcaa ttgccagccc gctggctgca tccgtaccac tttcaatgga cagcatttcg
    27901 ctctgcactc cgtcgggggt tcctgaaaag gtgacgtcaa ccgtgctgac atctgttccg
    27961 caatcctgca aattaatgat gaaagatttc tccgggccat aattcccatg aaaaaaacgt
    28021 gtcagcgaga catcgcctaa ctgcacattg atttgcttgc tatcctgtgc cagcacgcat
    28081 gtattacggc gaaacgatcc gctaatgttg actgtgccat catgggcaaa tagctcacag
    28141 ccccccgtta atcccagtaa gaacagaatc cagattatcc gtttcaacat cactccttca
    28201 ctggtaaacc agatcaaaat agagaaccgc cgtcgcatta ccgcccgttg ctcccgcctt
    28261 tgtggactta taacgaagtt gatatttgag tgtgttatcc ccggctttta agggcgtaag
    28321 aggctggacc tgattgagcg ggatttcttg ctgactttgc gcatcaagaa tttgcacggc
    28381 aatccccgtt gccataccac cgcttccgcc tgtgtcagtt agtttgagca gtgtcggcgc
    28441 aagggtgtca gcctcgccgc taaaaaggac gtccgcgcca gtaataccag cggcacaacc
    28501 ggtgatatcg atattcaaat cagcagcagt gcttacggta ttcgcggcct gaaaatcact
    28561 gatattaaaa tcaccaatat gaatattttg taatgcactt ttggtggcga catcacagcc
    28621 ctgatcgacc acattcccat aaatatgcat actaacttgt tcaggcccag ccatcccgac
    28681 atggatgtta agaatgctaa agaacaagat aacgcactga aatatcgttt ttttcttcat
    28741 acgttcacgc gttaatcaaa atttattctc accgttgccg tggcttcaaa tcgcccggtt
    28801 tctggtggta cacctgtcgt gctgactgga tagacattca ttcgcgcgat actgtctgca
    28861 tcatcaggaa tagagagcgg taatgttcca ccagcagggg aaataatgtt gttctggcta
    28921 tcggtcacca ccacgcccac gccaggacgt gacgtcttaa tcgcctgggg atagctgggg
    28981 tctgtggttg ccgtcagact caggttgacg ttaactaacc ccgcgtttcc cgtgttacac
    29041 ctgactggaa ttgcgagttc tgccgttctg gccccaaggg gtttatgccc tacaacacga
    29101 aagttagccg caaatacgtc gcccagatcg acctcgatag tctctccggc attgacggaa
    29161 catgagccaa gtgaattgat cgtaccagac aggtaataca ctaaaaccga tgtacctgta
    29221 gtcgtgcagg aatcacctgc gggtatgttg tagcattcaa ataatcgcgc cagcgccata
    29281 ggaggaatga cgaccgaacc aacgaacggc tgcaatattt tcagggaaaa gctaccgcta
    29341 ttaccgctag ccccctggcc acctaaacgt tgaccgccgg gatcgcaaat atgccatcgt
    29401 gtatctgccc ctgtgcccac gttttcgaaa ggaaccgcag taggagaact gcctttaacc
    29461 tgcaataaaa ctttggcggc aagatagtca ttaattttgt accagttgtc gcctaaatag
    29521 actaacggtg aatccgcggc gaatgcccat cggccacttc tgacattgtc tttatcgcaa
    29581 tcacaggaaa cataataatc attcgattcg ttccactgat aaaatttgtc tttaactact
    29641 ccagccgtat tttcttcttc ctccagggtt ttaacgccaa aattgacgcc aatatacgga
    29701 ttcccctgag tggtatgaca ctgcccgcta taagcagcag tttgagcgca ccatagcatt
    29761 aagacggcgg caaaaaatag tcgtagtaat aacacgcatt tttctccaaa gattatctgc
    29821 atatggcatc cattcgcgta atcgcagagt taatttgttg ttcggtaagc tggtaactga
    29881 tatgacaaat ttgatcggga gcttcgcccc agcgtacagt tatcgctccc tgagcgggca
    29941 aaccggacat atagagcgag ccatcatcat caataatgcc gctattagtc tgtatgccgt
    30001 ccagcgtcgc tatcgcgcca aaacgcagcg gtataccctg ctttgatgtt ttcattaata
    30061 cccttgctcc cgcatgggca ttgaactccg ccagaaccaa cgcccctttg gtgggaacca
    30121 cgttgactac tgcattttca agatccacgt tacgttttaa cgatgccgca tcaagtgcga
    30181 ttcgattttc ccgataagaa gtggcatagg ggacaacggt atatccgcgc cagtcagttt
    30241 tcagcccggt gctgttcgcc acacgagtat tctctgcgcc tggtgctgca atcagcacgt
    30301 tagtttcccc cagcgattgc cccagggtaa tgccctgtga atgggcaact aaactgcctg
    30361 aaagagcgta gttcagttgt tgttgactgc cgttatcgct gtagttgtag cccactcggg
    30421 catctgcaaa cgcccctttg tagtccatgc tggcgctacc attagccgtt ttcccctcgc
    30481 tgttatatcc ctgttgcacg ctgtagctca ggttaccgtc atcgagtagt gtctccgtta
    30541 aacccaggtt ttgtgtaatg tgcccttcgt tatcgatact ggtgttagag gtcatccagg
    30601 cgtaattttt tttcctggta tagctatcat tacttctggg gagcaacaga ttgagcggca
    30661 gggaaaaatt tagtgcaaac acctgatcag catcaggttg accacgggac ttactgtagt
    30721 tccaggaaac ccccagcgag agatctttaa tttgcgtgtt gtagccaaac tgtaatagcc
    30781 gatcctgttg atcggtatgc cagtaagttt gctggctacc acttaaataa aacgaaccgt
    30841 actcgcctaa ttgctgggag atattgacct gcagtttgcc acgtttggtg taaaacaaat
    30901 tgtaataacg cgaccacatc ggcgtatctt catcatcacc gtcattaaat tcgtagccat
    30961 ccatatgttt atacatggtg tcggaaaggg tgtagaaacc cgacgtcgaa tagcgatagc
    31021 ccatcaattg aaaattagtg cccaattggt tgagcgtttt ggcatacaga aaacgatatg
    31081 actgaccttt atgttcgctt tggtctgcca gcgtactctt cgcctgggtc acatcgaacg
    31141 aaattgctcc gaaatcgcca aggttaaatc ccagaccaaa catggcggca cggtaatatt
    31201 cagcatattg tccaccacca taccatgtcg tttcccacgg tccgccccac tgcaacgtgg
    31261 cctgggcaaa tttgctctcc tgctgttcat tactattggt tctgtatttc gccagtgtca
    31321 ccgcgtattt gattcgcccc tgacgctgga gtaatggcac gctggaaaac ggtacgctgt
    31381 agctattgac gctgccgtcc gcttctttga tttcaactaa caaatcaccg ctcgacgacg
    31441 tggaatagag atcactaatt tcaaaagcac caggcgatac ataagtttgg taaatggtgt
    31501 aaccattttg cttaatcgtt atctgggcat tgcttttggc gataccacgc accacaggcg
    31561 caaacccttt caggctgtct ggcagcatgt tgtcatctga cgccagctgc acaccacgaa
    31621 agctgacact atcgaaaaaa tcgcctgcag tataatcatc acctacggtc agttcgcctt
    31681 ttagtggaat aaccgcccgc tgcaaatagc tgctgagatt cttccattct gcggtttggc
    31741 cactactgcg actccatgtt gaattgttgc gcaatctcca tgggcctaaa ttaacgccac
    31801 tgtttaaatt cagaaaatag ctgtcgccag aatcactgtc tgcgctgcta tgaatactgt
    31861 tagccccgct aaacgaatat cccagtaata gcgcgttgat cccttcatcc caacgttcag
    31921 gggggacata accacgggca ttacttttga tggcgatttg cggtactgaa atttccagac
    31981 ggagtttatt cacattaaac gttacgctgg catccggaat aatctccgcc aatggcacac
    32041 acgcttgttt gtccagttgt ttaaaagccg gaaacgcatc agtattaaca cccattgcat
    32101 ccaggctttc agtcgtcaaa caggcggcaa tccccttctc tggcgttatc tcaacaaaat
    32161 tgacgttgcg cgtatctaca attgtctgat tcagaacaat atcgacacga taaacccctg
    32221 gcgttatttt ttgtcctttt tcgaaacgag acaaatcggc caccattgag ggatcatctt
    32281 tgaaaaaagc aggatcgaac caggtttcag cttgtgcatt gaacgctgcc gacacaaaca
    32341 ccaccagccc accaataaac gatggcactc caccagagct taacaggctg tgttgtcgat
    32401 gagttctata catctcgctc tcttaactga agacggctta cgatttacag ttgagttgcg
    32461 gcgtttccgc cccgtagtca ttgatggttc gatacgttac gctgctattt ttggccccct
    32521 ttggcagaga aaattggtat ttatcaaagg gggaaatcat ttgattttta actacttttc
    32581 cacctatttt caggtctgtc agggtaatga aataaggtgt tgggttactg accgtaacca
    32641 tgtcagctga cgaagtgcaa cgcagtttcg ccggagcctc gcctaaggga tacgctaaac
    32701 cttttggtcg ccagaaaagt ttgatgacgc tttgtgtggc aatcttcagg gtatttccct
    32761 cttcccgctt cgttgttgaa gggactgccc gtacgctagt gaagaaaagg gtttctctgt
    32821 ctttcgccaa cggcgcacca atgtacataa tgcgtaacag attctcatta gccggattca
    32881 gcacaaatag cggtggtgta ataataaaat ctgctgattt tttattatct ggggtcatca
    32941 cccatgactg aataagataa ggaacatccg gactggtgtt acgtacaccc agtgaaattt
    33001 gctcttcacc ttctgaataa acaagacgtg ttgctgcaag tccaatcccg cctttacctg
    33061 ccgcccatgc ggatgagcag ctgagtaata ttgccgttaa acttacggtc acaattccct
    33121 ttgttatgca agttttcata aatagtcact cttaaaaaat atgaatatcc cctccagaac
    33181 actagagggg tactaattaa taaaacaatt aatgagttct attaataata gttaatatgg
    33241 aaatttgtta ccgcattcac attaccagaa gtcgctttcc ccgtagcgat ataatcaact
    33301 ttaaaggtca ctgtttgctc agcagaatcc gctaactgaa tattcgacgt ttcggtaccg
    33361 ggagttaccg atgtagaacc atctggcaga tacatttgta gagcaacatt cgtcgctgca
    33421 tcggtggtag cctggttggc aaatgctgta ggttgcacgc cgtcagccgt accactaaag
    33481 gtaaacgtcg catttttagt tacagtaaca tcacagcctt ctaaggcaat tggtacatca
    33541 gttttaacgc cagagactgc tccattagtt tgcaacttgg tggcgctgac atttggcaat
    33601 gtgactactg aatctttcgt cgcagctacc agggtacaag ctggagcaat aactttacca
    33661 ttaaatgtta ctttgccatc cgtgatagca ttatcatcag ctgccataac gctggacgtt
    33721 gcacatacca cagttataaa cgccgtcaat acactttttt tcatcgtcat catcctgatc
    33781 tcttcgtaaa tatgataa
//
LOCUS       DAPGWB010000034        33657 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.034, whole genome shotgun sequence.
ACCESSION   DAPGWB010000034 DAPGWB010000000
VERSION     DAPGWB010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 33657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33657
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.034"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            9..245
                     /locus_tag="RHX79_001596"
     CDS             9..245
                     /locus_tag="RHX79_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HDV2196785.1"
                     /translation="MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLL
                     RGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW"
     gene            248..1105
                     /locus_tag="RHX79_001597"
     CDS             248..1105
                     /locus_tag="RHX79_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310380.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDV2196786.1"
                     /translation="MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQSPWTRDGKIRAEK
                     VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKAN
                     NEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSG
                     WVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKT
                     LRGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSG
                     TTCSIAVGQ"
     gene            1105..3117
                     /locus_tag="RHX79_001598"
     CDS             1105..3117
                     /locus_tag="RHX79_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDV2196787.1"
                     /translation="MNASSWSLRNLPWFKATLAQWRYALRNTIAMCLALTVAYYLNLD
                     EPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSA
                     WLGFCTWACAHFTNNVAYAFQLAGYTAAIIAFPMVNITEASQLWDIAQARVCEVIVGI
                     LCGGMMMMILPSSSDATALLTALKNMHARLLEHASLLWQPETNDAIRAAHEGVIGQIL
                     TMNLLRIQAFWSHYRFRQQNARLNALLHQQLRMTSVISSLRRMLLNWPSPPGATREIL
                     EQLLTALASSQTDAYTVARIIAPLRPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRL
                     QSGVDDHARLARTSALARHTDNAEAMWSGLRTFCTLMMIGAWSIASQWDAGANALTLA
                     AISCVLYSAVAAPFKSLSLLMRTLVLLSLFSFVVKFGLMVQISDLWQFLLFLFPLLAT
                     MQLLKLQMPKFAALWGQLIVFMGSFIAVTNPPVYDFADFLNDNLAKIVGVALAWLAFA
                     ILRPGSDARKSRRHIRALRRDFVDQLSRHPTLSESEFESLTYHHVSQLSNSQDALARR
                     WLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVRDNCISLLRGVMSERGVQQKSLAATL
                     EELQRICDSLARHHQPAARELAAIVWRLYCSLSQLEQAPPQGTLAS"
     gene            complement(3118..3639)
                     /gene="sodC"
                     /locus_tag="RHX79_001599"
     CDS             complement(3118..3639)
                     /gene="sodC"
                     /locus_tag="RHX79_001599"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC2"
                     /protein_id="HDV2196788.1"
                     /translation="MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTIT
                     ETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHE
                     GPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPL
                     GGGGERYACGVIK"
     gene            complement(3720..4616)
                     /locus_tag="RHX79_001600"
     CDS             complement(3720..4616)
                     /locus_tag="RHX79_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HDV2196789.1"
                     /translation="MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDL
                     GVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITD
                     RDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNF
                     TPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLF
                     NDDYFQQLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAE
                     TLKMTRQQWFRIRKAALGYDVP"
     gene            complement(4665..4904)
                     /locus_tag="RHX79_001601"
     CDS             complement(4665..4904)
                     /locus_tag="RHX79_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HDV2196790.1"
                     /translation="MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSD
                     GEKQEVLRLCRQRLMRKLRANKPASSDEPEQPSLF"
     gene            5007..5606
                     /gene="nemR"
                     /locus_tag="RHX79_001602"
     CDS             5007..5606
                     /gene="nemR"
                     /locus_tag="RHX79_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416166.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NemR"
                     /protein_id="HDV2196791.1"
                     /translation="MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGS
                     FYHYFRSKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGT
                     ISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQA
                     QVLYALWLGANLQAKISRSFVPLENALAHVKNIIATPAV"
     gene            5643..6740
                     /gene="nemA"
                     /locus_tag="RHX79_001603"
     CDS             5643..6740
                     /gene="nemA"
                     /locus_tag="RHX79_001603"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-ethylmaleimide reductase"
                     /protein_id="HDV2196792.1"
                     /translation="MSSEKLYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAE
                     YYRQRASAGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQL
                     WHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGI
                     VNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEV
                     VDAGIEEWGADRIGIRVSPIGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDW
                     AGGEPYTDAFREKVRARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLV
                     ARLQRKAELNPQRAESFYGGGAEGYTDYPTL"
     gene            6821..7228
                     /gene="gloA"
                     /locus_tag="RHX79_001604"
     CDS             6821..7228
                     /gene="gloA"
                     /locus_tag="RHX79_001604"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HDV2196793.1"
                     /translation="MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV
                     GYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGP
                     VKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN"
     gene            7331..7978
                     /gene="rnt"
                     /locus_tag="RHX79_001605"
     CDS             7331..7978
                     /gene="rnt"
                     /locus_tag="RHX79_001605"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HDV2196794.1"
                     /translation="MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL
                     KMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKV
                     VRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALG
                     QTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV"
     gene            8071..12687
                     /locus_tag="RHX79_001606"
     CDS             8071..12687
                     /locus_tag="RHX79_001606"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HDV2196795.1"
                     /translation="MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARS
                     EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ
                     RNLQLPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYL
                     MLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVR
                     SASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASSTGEDSHAGREGS
                     IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE
                     STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMG
                     AVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGR
                     LENLTPPHNPLDVLAQQTVAAAAMEALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS
                     GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA
                     GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEG
                     NGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTNANIQGLIDEQRNTTGIVPGS
                     RHLVLERCRDEIGDWRIILHSPYGRRVHEPWALAITGRIHALWGADASVVASDDGIVA
                     RIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHR
                     TPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQIS
                     DVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELL
                     DPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLE
                     NLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLR
                     YLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRS
                     LQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQL
                     AGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEY
                     AAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEAL
                     WALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPLVSYNTPN
                     LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSME
                     DSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNL
                     LPWPAHPATLVSTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTT
                     ALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG"
     gene            complement(12738..13085)
                     /gene="grxD"
                     /locus_tag="RHX79_001607"
     CDS             complement(12738..13085)
                     /gene="grxD"
                     /locus_tag="RHX79_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin 4"
                     /protein_id="HDV2196796.1"
                     /translation="MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACG
                     ERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE
                     TAAKYKSEEPDAE"
     gene            13419..14234
                     /gene="mepH"
                     /locus_tag="RHX79_001608"
     CDS             13419..14234
                     /gene="mepH"
                     /locus_tag="RHX79_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-endopeptidase MepH"
                     /protein_id="HDV2196797.1"
                     /translation="MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKA
                     DKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASA
                     SFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGG
                     SSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQG
                     RGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR"
     gene            14362..14943
                     /gene="sodB"
                     /locus_tag="RHX79_001609"
     CDS             14362..14943
                     /gene="sodB"
                     /locus_tag="RHX79_001609"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HDV2196798.1"
                     /translation="MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIK
                     GTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFG
                     SFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWE
                     HAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA"
     gene            complement(15089..16258)
                     /locus_tag="RHX79_001610"
     CDS             complement(15089..16258)
                     /locus_tag="RHX79_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196799.1"
                     /translation="MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGM
                     LISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRIL
                     TSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRM
                     SFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMF
                     TLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLL
                     MVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAF
                     NLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS"
     gene            complement(16424..16513)
                     /gene="ynhF"
                     /locus_tag="RHX79_001611"
     CDS             complement(16424..16513)
                     /gene="ynhF"
                     /locus_tag="RHX79_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein YnhF"
                     /protein_id="HDV2196800.1"
                     /translation="MSTDLKFSLVTTIIVLGLIVAVGLTAALH"
     gene            16812..17837
                     /gene="purR"
                     /locus_tag="RHX79_001612"
     CDS             16812..17837
                     /gene="purR"
                     /locus_tag="RHX79_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HDV2196801.1"
                     /translation="MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELH
                     YSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE
                     KQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVID
                     NAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQ
                     GDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDN
                     VRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADG
                     PFRDYRR"
     gene            complement(17834..18766)
                     /locus_tag="RHX79_001613"
     CDS             complement(17834..18766)
                     /locus_tag="RHX79_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2196802.1"
                     /translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL
                     AVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV
                     RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAF
                     RDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKR
                     VVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQND
                     MSPALTWLLEYLGDSETLNKEWLREPEETPATGD"
     gene            18879..20090
                     /locus_tag="RHX79_001614"
     CDS             18879..20090
                     /locus_tag="RHX79_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HDV2196803.1"
                     /translation="MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVS
                     ASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRF
                     VQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQ
                     AIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSAS
                     FFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLV
                     LFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAA
                     LQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNH
                     GNAEVAHSESH"
     gene            20381..21529
                     /gene="cfa"
                     /locus_tag="RHX79_001615"
     CDS             20381..21529
                     /gene="cfa"
                     /locus_tag="RHX79_001615"
                     /EC_number="2.1.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane fatty acyl phospholipid synthase"
                     /protein_id="HDV2196804.1"
                     /translation="MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNP
                     DFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIASAR
                     LFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC
                     EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTIL
                     LQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN
                     VDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPE
                     IADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR"
     gene            complement(21569..22210)
                     /gene="ribE"
                     /locus_tag="RHX79_001616"
     CDS             complement(21569..22210)
                     /gene="ribE"
                     /locus_tag="RHX79_001616"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDV2196805.1"
                     /translation="MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAH
                     NGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGH
                     IMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVH
                     LIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA"
     gene            22425..23798
                     /gene="mdtK"
                     /locus_tag="RHX79_001617"
     CDS             22425..23798
                     /gene="mdtK"
                     /locus_tag="RHX79_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MdtK"
                     /protein_id="HDV2196806.1"
                     /translation="MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDM
                     AAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLI
                     MLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPG
                     MVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSM
                     RDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQI
                     ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTV
                     SLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITF
                     TAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVI
                     ILQRASR"
     gene            complement(23839..25095)
                     /locus_tag="RHX79_001618"
     CDS             complement(23839..25095)
                     /locus_tag="RHX79_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIDA repeat-containing protein"
                     /protein_id="HDV2196807.1"
                     /translation="MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENT
                     VVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRH
                     PEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE
                     LLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGT
                     DGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRA
                     PVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDGVTFIVGNINL
                     NGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITD
                     ASRQTLCNALKLQPDEDGIGATLQPA"
     gene            25403..25479
                     /locus_tag="RHX79_001619"
     tRNA            25403..25479
                     /locus_tag="RHX79_001619"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:25437..25439,aa:Val,seq:gac)
     gene            25484..25560
                     /locus_tag="RHX79_001620"
     tRNA            25484..25560
                     /locus_tag="RHX79_001620"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:25518..25520,aa:Val,seq:gac)
     gene            25668..25973
                     /locus_tag="RHX79_001621"
     CDS             25668..25973
                     /locus_tag="RHX79_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monooxygenase"
                     /protein_id="HDV2196808.1"
                     /translation="MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTES
                     EKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA"
     gene            26099..27703
                     /locus_tag="RHX79_001622"
     CDS             26099..27703
                     /locus_tag="RHX79_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-NAD(P)-binding protein"
                     /protein_id="HDV2196809.1"
                     /translation="MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPY
                     SDEENSKMMLANIASIEIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILL
                     GEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVI
                     ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFI
                     EDDKQHVVFNRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKG
                     EEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNL
                     QEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPS
                     ESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKV
                     KDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTA
                     CAEIGEAMARAVVKPASRARRRLSFD"
     gene            complement(27715..28527)
                     /locus_tag="RHX79_001623"
     CDS             complement(27715..28527)
                     /locus_tag="RHX79_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196810.1"
                     /translation="MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYT
                     DWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCED
                     NARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRI
                     ANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTG
                     VVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRTGVRYRLNEQHQFVEC"
     gene            complement(28531..29316)
                     /locus_tag="RHX79_001624"
     CDS             complement(28531..29316)
                     /locus_tag="RHX79_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate reductase cytochrome B subunit"
                     /protein_id="HDV2196811.1"
                     /translation="MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVL
                     GLHALLRARGVKKSVTDYGEKIYLYCKAVRLWHWSNALLFVLLLASGLINHFALVGAT
                     AVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGI
                     MQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYW
                     LLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH"
     gene            complement(29313..29981)
                     /locus_tag="RHX79_001625"
     CDS             complement(29313..29981)
                     /locus_tag="RHX79_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416186.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDV2196812.1"
                     /translation="MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDES
                     RCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCID
                     VCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLA
                     KGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIK
                     KENV"
     gene            complement(30045..30683)
                     /locus_tag="RHX79_001626"
     CDS             complement(30045..30683)
                     /locus_tag="RHX79_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310406.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdhW family putative oxidoreductase system
                     protein"
                     /protein_id="HDV2196813.1"
                     /translation="MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAE
                     FIRQHSVAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYS
                     TQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEA
                     AIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP"
     gene            complement(30696..32798)
                     /locus_tag="RHX79_001627"
     CDS             complement(30696..32798)
                     /locus_tag="RHX79_001627"
                     /EC_number="1.2.7.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase"
                     /protein_id="HDV2196814.1"
                     /translation="MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDE
                     VPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQ
                     MKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCV
                     AAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKR
                     LNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPP
                     GNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGN
                     TCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYS
                     KGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWN
                     LGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPL
                     KLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTV
                     SPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRN
                     EHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQR
                     LGLEDIAADLAAHNLLPA"
     gene            complement(32819..33445)
                     /locus_tag="RHX79_001628"
     CDS             complement(32819..33445)
                     /locus_tag="RHX79_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like protein"
                     /protein_id="HDV2196815.1"
                     /translation="MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQE
                     DIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFG
                     DNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCS
                     ACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV"
BASE COUNT         8068 a         8891 c         8295 g         8403 t
ORIGIN      
        1 tctactttgt gaagtttatg ctcaatgcaa caggattgcc cttacaagat ctggtgttcg
       61 gtgcgtccgt ctattttcct ccgtttttca aagccttcgc gtttggattc gtcatctggc
      121 ttgtcgtaca ccgcctgctt cgtggctgga tctacgccgg tgacatctgg catcccttgt
      181 taatggattt atcgctgttt gcgatttgcg tttgccttgc tctggcaata ctgattgcgt
      241 ggtaactatg tcaattaaaa caattaagta tttctcaaca atcattgtag cgatagttgc
      301 ggttcttgcc ggatggtggc tgtggaatta ttacatgcaa tctccgtgga cacgcgacgg
      361 gaaaatacgc gcagaaaagg tttctatcac cccacaggtg tcgggacgta ttgttgagct
      421 gaatataaaa gacaaccaac tggttaacgc gggggatctt ctgctcacga tcgataaaac
      481 gccctttcag atcgccgagc tgaacgcaca ggctcagctg gcgaaagcgc aatctgacct
      541 cgcaaaagcc aataacgaag cgaatcgtcg tcgtcatctc tcacaaaatt ttatttctgc
      601 cgaagaactc gataccgcta acctcaatgt taaagcgatg caggccagtg ttaatgccgc
      661 acaggccacg ctgaaacaga cacaatggca actggcgcaa acggaaattc gcgccccggt
      721 gagtggttgg gtgactaacc tcactacccg catcggcgat tacgctgaca ccgggaaacc
      781 gctgtttgcc cttgtcgaca gccactcgtt ttacgtcatt ggttattttg aagaaaccaa
      841 gttgcgccat atccgcgaag gtgcaccagc acaaattacc ctctatagtg ataacaaaac
      901 gttacggggt cacgtttcca gtatcggtcg ggcgatttat gatcaaagcg ttgaaagtga
      961 ctcaagcctt attccggatg tgaaacctaa cgtcccctgg gttcgtctcg cccaacgcgt
     1021 tcccgtccgc tttgcgctgg ataaagttcc aggcgatgtc acgctggtgt cgggcaccac
     1081 ctgtagcatt gccgtaggtc aataatgaac gcatcgtcat ggtccttgcg caatttgccc
     1141 tggttcaagg ccacgctggc gcaatggcgt tatgcgttac gcaataccat tgccatgtgt
     1201 ctggcgctga cggttgccta ttatttgaat ctggatgaac cctattgggc gatgacctcg
     1261 gctgcagtgg ttagctttcc caccgttggc ggtgtcatca gcaaaagcct cggacgcatc
     1321 gctggcagtt tactgggagc cattgcggca ctgcttcttg ccgggcatac gctcaatgag
     1381 ccgtggtttt ttctattgag catgtcggcg tggcttggct tttgtacctg ggcctgtgcg
     1441 cacttcacga ataacgtcgc gtatgcattt caactggcgg gctacacggc tgccatcatc
     1501 gcctttccga tggttaatat tactgaggcc agccagctgt gggatatcgc tcaggcgcgc
     1561 gtttgcgagg tgatagtcgg tattttgtgc ggcggcatga tgatgatgat cctgcctagc
     1621 agttccgatg ctacagccct tttaaccgca ttgaaaaaca tgcacgcccg attactggaa
     1681 catgccagtt tactctggca gcctgaaaca aacgatgcca ttcgtgcagc acatgagggg
     1741 gtgattgggc agatactgac catgaatttg ctgcgtatcc aggctttctg gagccactat
     1801 cgttttcgcc agcaaaacgc gcgccttaat gcgctactcc accagcaatt acgtatgacc
     1861 agtgtcatct ccagcctgcg acgtatgttg ctcaactggc cctcaccgcc aggtgccacg
     1921 cgagaaattc tcgaacaatt gctgacggcg ctcgccagtt cgcaaacaga tgcttacacc
     1981 gtcgcacgta ttatcgcccc gctacgcccg accaacgtcg ccgactaccg gcacgtcgcc
     2041 ttctggcagc gactacgtta tttttgccgc ctttatctgc aaagtagtca ggaattacat
     2101 cgtctgcaaa gcggtgtaga tgatcatgcc agactcgcac ggacatccgc tctggctcgt
     2161 cataccgaca acgccgaagc tatgtggagc gggctgcgta cattttgtac gttgatgatg
     2221 attggcgcat ggagtattgc atcgcaatgg gatgccggtg ccaatgcatt aacgctggca
     2281 gcaattagct gcgtactcta ctccgccgtc gcagcaccgt ttaagtcgtt gtcactgctg
     2341 atgcgcacgc tggtgttact ttcgctattc agctttgtgg tcaaatttgg cctgatggtc
     2401 cagattagcg atctgtggca atttttactg tttctctttc cactgctggc gacaatgcag
     2461 cttcttaaat tgcagatgcc caaatttgcc gcactgtggg ggcaactgat tgtttttatg
     2521 ggttcgttta tcgctgtcac taatcccccg gtgtatgatt ttgctgattt tcttaacgat
     2581 aatctggcaa aaatcgttgg cgttgcgctg gcttggctag cgttcgccat tctgcgtcca
     2641 ggatcggatg ctcgtaaaag ccgccgccat attcgcgcgc tgcgccggga ttttgtcgat
     2701 cagctaagcc gccatccaac actgagtgaa agcgaatttg aatcgctcac ttatcatcac
     2761 gtcagtcagt tgagtaacag ccaggatgcg ctggctcgcc gttggttatt acgctggggt
     2821 gtagtgctgc tgaactgttc tcatgttgtc tggcaattgc gcgactggga atcgcgttcc
     2881 gatccgttat cgcgagtacg ggataactgt atttcactgt tgcggggagt gatgagtgag
     2941 cgtggcgttc agcaaaaatc actggcggcc acacttgaag aattacagcg gatttgcgac
     3001 agccttgccc gtcatcatca acctgccgcc cgtgagctgg cggcaattgt ctggcggctg
     3061 tactgctcgc tttcgcaact tgagcaagca ccaccgcaag gtacgctggc ctcttaatta
     3121 cttaattaca ccacaggcat agcgttcacc gccaccgccc agcggtttag gttgatcgga
     3181 catattatcg ccgccaacgt ggaccatcag cgctttgtct ttgatttcat ccagtgattt
     3241 cagacgaggc gcgatgacgg catcggtagc tttgccgtca ttattgacga ccagtgcagg
     3301 cagatcgcct aaatgcccgg caccttctgg cccttcatgt ttaccggtat tttgtggatc
     3361 aagatgcccg cctgcggatt ccgcggcgct ggctttgcca tctttggtgg ctggctggca
     3421 gcttcctttg gcatgaatat ggaagccatg ttcaccgggg ggtaatgctt tcagatcggg
     3481 cgaaaactcc agacctttat cggtttcagt aatggtgacg ctaccaattg actgccctac
     3541 cccttgcgac gtgacgaggt tcatctcgac tttttcactg gcagcttgtg cgccggttgc
     3601 aacaaccagc gccagaatag ccagactaaa acgtttcata ggacctccgt tcattgtgca
     3661 ttcctgaata agtgtaaacc agtgacacat ttttgaacgg cggctattcc taaaagtgct
     3721 tacggtacgt cgtaccccag tgccgcttta cggatacgaa accattgttg acgggtcatt
     3781 ttcagtgttt ctgcttcgac agctgcccgt acgcgctcaa ttttacctga accgataatt
     3841 ggcagcggct gcgatggtaa acgtaatacc caggcgtaaa ccacctgttc aatcgagccc
     3901 gcgtttaact cctctgccac cacagccagt tcatcacgca gctgctggaa ataatcatca
     3961 ttaaacagac gaccaccacc aaggcaggac cacgccatcg gacgaacacg cagttgttgt
     4021 agttggtcga gcgtgccatc cagcagtaac ggctgatgca ccggggatat ttccacctga
     4081 ttagtggcaa gggtaaacgg cagacgtgat tgcaacaggg caaattgcgc aggcgtaaag
     4141 ttcgatacgc caaaatgacg cactttgccg ctctgatgca gatgtttgaa cgcgtccgcc
     4201 acttcatcgg catccattaa cgggtctggt cggtggatta acagcagatc cagatgatcg
     4261 gtcgcgagat taattagcga ctgttcggcg ctcttaatga tgtgatcgcg gtcagtgatg
     4321 taatgaccaa tgacgttttc ttcacgcgcg gtcgtcgcga taccgcattt actgacgatt
     4381 tccatccgtt cacgcaggtg aggtgccagt ttcagtgcct cgccaaacgc cgcttcgcac
     4441 tgatagccac cataaatatc agcatggtcc acggtggtca cgccgagatc cagatgctct
     4501 tcaataaaac tgaccagctg gcgggcggac atattccagt ccatcaatcg ccagtagccc
     4561 atcacaaaac gggaaaactc cgggccttgc ggcgcaatag taatacgctg aaccataatc
     4621 acttcctctt atcagatatg agaggagtat acgcaagatt aggttcaaaa gagtgatggt
     4681 tgctccggtt cgtctgatga cgctggctta tttgcgcgta atttgcgcat taatcgctgc
     4741 cgacaaaggc gcagcacctc ttgtttttcg ccatcgctca ttttattcca gttaaaacgc
     4801 tcatcacgac tacgaaaaca gccgcgacaa aacccgcgtt cgtcagactg gcaaattccc
     4861 cggcacgggc tctggacggg aaagaactct aattgctccg ccacttcgcc ctcctcagat
     4921 aagattatta ccattattga agctgttaat gtccaaagta gcaactttgc ttgcactaga
     4981 ccgactggtc tactacactc caacgcatga acaaacacac cgaacatgat actcgcgaac
     5041 atctcctggc gacgggcgag caactttgcc tgcaacgtgg attcaccggg atggggctaa
     5101 gcgaattact aaaaaccgct gaagtgccga aagggtcctt ctatcactac tttcgctcta
     5161 aagaagcgtt tggcgttgcc atgcttgagc gtcattacgc cgcatatcac cagcgactga
     5221 ctgagttgct gcaatccggc gaaggtaact accgcgaccg catactggct tattaccagc
     5281 aaacactgaa ccagttttgc caacatggaa ccatcagtgg ttgcctgaca gtaaaactct
     5341 ctgccgaagt gtgcgatctg tcagaagata tgcgcagcgc gatggataaa ggtgctcgcg
     5401 gcgtgatcgc cctgctctct caggcgctgg aaaatggccg tgagaaccat tgtttaacct
     5461 tttgtggcga accgctacaa caggcacaag tgctttacgc actgtggctt ggcgcgaatc
     5521 tgcaggccaa aatttcgcgc agtttcgtgc cactggaaaa cgcgctggcc catgtaaaaa
     5581 acattattgc gacgcctgcc gtttagcagg cattttttat caccagacga ccgggagcct
     5641 ttatgtcatc tgaaaaactg tattccccac tgaaagtggg cgcgatcacg gcggcaaacc
     5701 gtatttttat ggcaccgctg acgcgtctgc gcagtattga accgggtgac attcctaccc
     5761 cgttgatggc ggaatactat cgccaacgtg ccagtgccgg tttgattatt agtgaagcca
     5821 cgcaaatttc tgcccaggca aaaggatatg caggtgcgcc tggcatccat agtccggagc
     5881 aaattgccgc atggaaaaaa atcaccgctg gcgttcatgc tgaaaatggt catatggccg
     5941 tgcagctgtg gcacaccgga cgcatttctc acgccagcct gcaacctggc ggtcaggcac
     6001 cggtagcgcc ttcagcactt agcgcgggaa cacgtacttc tctgcgcgat gaaaatggtc
     6061 aggcgatccg tgttgaaaca tccatgccgc gtgcgcttga actggaagag attccaggta
     6121 tcgtcaatga tttccgtcag gccattgcta acgcgcgtga agccggtttt gatctggtag
     6181 agctccactc tgctcacggt tatttgctgc atcagttcct ttctccttct tcaaaccatc
     6241 gtaccgatca gtacggcggc agcgtggaaa atcgcgcacg tttggtactg gaagtggtcg
     6301 atgccgggat tgaagaatgg ggtgccgatc gcattggcat tcgcgtttcg ccaatcggta
     6361 ctttccagaa cacagataac ggcccgaatg aagaagccga tgcactgtat ctgattgaac
     6421 aactgggtaa acgcggcatt gcttatctgc atatgtcaga accagattgg gcggggggtg
     6481 aaccgtatac tgatgcgttc cgcgaaaaag tacgcgcccg tttccacggt ccgattatcg
     6541 gcgcaggtgc atacacagta gaaaaagctg aaacgctgat cggcaaaggg ttaattgatg
     6601 cggtggcatt tggtcgtgac tggattgcga acccggatct ggtcgcccgc ttgcagcgca
     6661 aagctgagct taacccacag cgtgccgaaa gtttctacgg tggcggcgcg gaaggctata
     6721 ccgattaccc gacgttgtaa tccaacattg cgagcggcgt aaagccgccg ctatactaaa
     6781 acaacatttt gaatctgtta gccattttga ggataaaaag atgcgtcttc ttcataccat
     6841 gctgcgcgtt ggcgatttgc aacgctccat cgatttttat accaaagtgc tgggcatgaa
     6901 actgctgcgt accagcgaaa acccggaata caaatactca ctggcgtttg ttggctacgg
     6961 cccggaaacc gaagaagcgg tgattgaact gacctacaac tggggcgtgg ataaatacga
     7021 actcggcact gcttatggtc acatcgcgct tagcgtagat aacgccgctg aagcgtgcga
     7081 aaaaatccgt caaaacgggg gtaacgtgac ccgtgaagcg ggtccggtaa aaggcggtac
     7141 tacggttatc gcgtttgtgg aagatccgga cggttacaaa attgagttaa tcgaagaaaa
     7201 agacgccggt cgcggtctgg gcaactaatc tcctgccggg cgtgaactca tcgcgcccgc
     7261 atctttactg catcgacaag taatatttgt cataatgcgc gctgcaattt atccgtatta
     7321 agagaatcag atgtccgata acgctcaact taccggtctg tgcgaccgtt ttcgtggttt
     7381 ttatcctgtt gtgatcgatg ttgaaacagc cggatttaac gccaaaaccg atgcgctgct
     7441 tgagattgcc gccatcaccc tgaaaatgga tgaacaaggc tggctgatgc cggacaccac
     7501 attacatttc cacgtcgaac catttgtcgg cgcaaatttg cagccagagg ccctcgcctt
     7561 caacggcatt gacccgaacg atcccgatcg cggcgcggtc agcgaatacg aggcgctgca
     7621 cgaaattttt aaagttgtac gtaaaggtat taaagcgagc ggctgtaacc gcgccattat
     7681 ggtggcgcac aatgccaatt ttgatcacag ctttatgatg gccgccgcag aacgcgcctc
     7741 actgaaacgt aacccgttcc accctttcgc cacttttgac accgctgcac tggccgggct
     7801 ggcactcgga caaaccgtat tgtcaaaggc ttgccagacc gctggcatgg acttcgacag
     7861 cacccaggcg cactccgcgc tgtacgacac cgaacgcact gctgtgctgt tttgtgaaat
     7921 cgtcaaccgc tggaaacgtc tgggaggctg gccgctacct gccgccgaag aggtgtaatc
     7981 gagtcgatgc ctgatgacat gcaatgattc aggcatctat agtgaggcta ttccacgcat
     8041 cctgcatgat attcacgggg aatagcgtta atggcagata atccagaccc ttcatcgctc
     8101 ctgccggacg tgttttcacc ggcgacccgc gactggtttc ttcgcgcctt taaacagccg
     8161 accgctgtcc agtcgcaaac ctggcatgtg gcggcgcgaa gcgaacatgc gctggtgatt
     8221 gcaccgaccg gctccgggaa aacgctggca gcatttctct acgccctcga tcggctcttc
     8281 cgcgaaggcg gcgaagatac ccgcgaggcg cataagcgta aaacctcacg catcctctat
     8341 atttcaccga taaaagctct gggcaccgac gttcagcgca acttgcagct cccgttgaag
     8401 ggtattgccg atgaacggcg gcggcgcggc gaaacggaag tcaatcttcg cgtagggatc
     8461 cgtactggcg atacgcctgc acaggaacgc agcaaactca cccgtaatcc gccggatatt
     8521 ctgatcacca cacccgaatc actctatctg atgctgacct cccgcgcgcg cgaaacgcta
     8581 cgcggcgtcg aaacggtaat tattgatgaa gtccacgcgg tagcgggcag taaacgtggt
     8641 gcgcatctgg cgttaagtct ggagcggctc gatgcgctgc tccacacctc agcacagcga
     8701 attggccttt ctgccactgt gcgctcagcc agcgatgtgg cagcatttct tggtggcgat
     8761 cgcccggtta cggtagtcaa cccgcccgca atgcgccatc cgcagatacg aattgtcgta
     8821 ccggtcgcca atatggatga tgtctcatcg gtcgccagca gcaccggcga agacagccat
     8881 gccggccggg aaggctccat ctggccatat attgaaacgg gtatccttga tgaagtgttg
     8941 cgccatcgct cgaccattgt ctttactaat tcacgtgggc tggcggaaaa actgacggca
     9001 cgattaaatg agctttacgc cgcacgctta cagcgttccc cgtctatcgc cgttgatgcg
     9061 gcccatttcg agtcgacctc cggcgcaacc tctaaccgtg tacaaagtag cgacgttttt
     9121 attgcccgct cacaccacgg ctccgtctct aaagaacaac gagcaatcac cgagcaggcg
     9181 ctgaaatcgg gtgagttacg ctgcgtggtc gcaacctcca gtctcgaact ggggattgat
     9241 atgggcgcag tggatctggt gattcaggtg gcaacgccgc tttctgttgc cagtgggtta
     9301 caacgcattg gtcgcgccgg acatcaggtt ggcggtgtat ctaaagggct gtttttccct
     9361 cgtacccggc gtgacttagt cgattccgca gtcattgtag agtgtatgtt cgcaggcagg
     9421 ctggaaaacc tgacaccgcc gcataatcca ctcgacgtcc ttgcgcagca aaccgttgcc
     9481 gccgcggcga tggaggcatt acaggtagac gaatggtact cccgcgtacg ccgtgccgca
     9541 ccgtggaaag atctgccaag acgtgttttt gacgccacgc tggatatgct ttccgggcgc
     9601 tatccctctg gcgatttttc tgcttttcgc cccaaactgg tctggaacag ggagaccggg
     9661 atattgaccg cccgacctgg cgctcaattg ttggcggtta ccagcggcgg caccattccg
     9721 gatcgtggca tgtatagcgt gttattaccc gaaggtgaag aaaaggccgg ttcgcggcgg
     9781 gtgggtgaac tggatgagga gatggtatat gagtcgcggg tgaacgacat tatcactctc
     9841 ggcgctacct catggcggat ccagcaaatc acccgcgatc aggtgattgt gactcctgct
     9901 ccgggtcgtt ctgcccggct ccccttctgg cgtggtgaag gtaacggacg tccggctgaa
     9961 ttaggcgaga tgatcggcga ttttcttcat ttgctggcgg atggcgcgtt cttttccggg
    10021 actattcccc cgtggctggc agaagaaaat acgaacgcca atattcaggg gttgattgac
    10081 gagcaacgca acacgacggg catcgttccg gggagtcgcc atctggtcct cgaacggtgc
    10141 cgtgatgaaa ttggcgactg gcgtattatt ttgcactctc cctatggaag acgggtgcat
    10201 gaaccctggg cgctggcgat taccgggcga atacatgccc tatggggcgc tgacgcgtct
    10261 gtggtcgcca gtgatgacgg cattgttgcg cgcattcctg acactgatgg taaattgccc
    10321 gacgccgcga tttttttgtt tgaaccagaa aagttgctgc aaattgtccg cgaggcggta
    10381 ggcagctcgg cacttttcgc cgcccgtttt cgcgaatgcg ccgcgcgggc attattaatg
    10441 ccggggcgca ctccgggcca tcgcaccccg ctttggcaac aacggctgcg cgccagtcag
    10501 ttgctggaaa tcgctcaggg atatccggat tttccggtca ttctcgaaac cctacgcgaa
    10561 tgtctgcaag atgtttatga tcttcccgca ctggaacgtt tgatgcgtcg cctgaacggt
    10621 ggcgaaattc aaatatccga tgtaacgacc actacgccct cgcctttcgc cacaagttta
    10681 ttgttcggct atgtcgcgga atttatgtac cagagcgacg ccccgctggc agagcgccgg
    10741 gcatccgtac tgtcgctgga cagcgagtta ctgcgcaatc tactcggaca ggtcgatccg
    10801 ggggaattac tcgacccgca ggtcattcgc caggtggaag aagagttgca acgactggct
    10861 cctggcagaa gagcgaaagg tgaagaagga ttgttcgacc tgctgcgcga actggggcca
    10921 atgaccgttg aagacctggc gcaacggcat acaggcagca gtgaagaggt tgcgtcgtat
    10981 ctggaaaatc ttcttgcagt aaaacgaatc ttcccagcga tgattagcgg acaggagcgt
    11041 cttgcctgta tggatgatgc cgccaggctg cgtgatgccc tcggcgtacg actaccagag
    11101 tcattgccag agatttattt acatagagtc agttacccgc ttcgcgacct ctttctgcgc
    11161 tatctccggg ctcatgctct ggtcacggct gaacaactgg ctcatgagtt tagtctcggt
    11221 attgccattg tcgaagagca gcttcagcaa ctgcgtgaac agggtctggt gatgaatctg
    11281 caacaagaca tctgggtgag cgatgaagta tttcgtcgtc tgcgtttgcg ctcgctgcaa
    11341 gccgccagag aagcgacgcg tcccgttgca gccacgacct atgcgcgatt gctgctggaa
    11401 cgtcagggcg tattacccgc caccgatggt agcccggcgc tctttgcctc aacatcgcca
    11461 ggcgtttatg agggcgtaga tggcgtgatg cgggtgatcg aacagcttgc cggagtcggt
    11521 ttacccgcct cactctggga aagccagatc ctgcctgccc gcgtacgcga ctattcgtca
    11581 gaaatgctcg atgaattact ggcaaccggt gcagttatct ggtcggggca aaaaaaactg
    11641 ggtgaagatg acggcctggt ggcactgcat ctacaggaat atgctgcaga atcgttcact
    11701 cccgccgaag cggatcaggc gaatcgttcg gcgctgcaac aagcgatagt cgctgttctg
    11761 gctgacggag gagcctggtt tgcacaacaa atcagccaac ggatacgcga caaaatcggc
    11821 gaatcggttg atctctctgc cctgcaagag gcgttatggg cgctggtctg gcaaggcgtc
    11881 atcaccagcg acatttgggc accgttacgc gccctcaccc gcagcagttc caacgcacgc
    11941 acctcaactc gccgcagtca ccgggctcgt cgtggacgtc ctgtctatgc gcaacccgtc
    12001 tcgccgctgg tatcttacaa cacaccaaat ctggctggac gctggtcgtt attgcaggtg
    12061 gagccactaa acgataccga aaggatgctg gcgctggcgg aaaatatgct cgaccgctac
    12121 ggcatcatca gtcgtcaggc ggtgatagcc gaaaatatcc ctggcgggtt tccatcgatg
    12181 caaacgcttt gtcgaagtat ggaagactcc gggcgaatta tgcgaggtcg ttttgtagaa
    12241 ggtctgggtg gcgcgcaatt cgctgaacgt ctgactattg accgattgcg cgatctggcg
    12301 acacaagcca cgcaaacgcg ccactataca ccagtggcgc tctctgccaa cgatccggct
    12361 aatgtgtggg gaaatcttct gccctggcct gcacatccgg caacgctggt ttcaacgcgt
    12421 cgggcgggtg cgctggtggt cgtttctggc ggcaaattgt tactctatct ggcgcaaggt
    12481 ggcaaaaaaa tgctggtctg gcaggaaaaa gaggaattac tcgccccaga ggttttccac
    12541 gcgctgacta ccgcactgcg tcgcgaacca cggctgcgct ttacgctaac agaagtgaat
    12601 gatctaccgg tccggcaaac gccgatgttt acgctgctgc gtgaggcggg attttcaagt
    12661 tcgccacaag ggctggattg gggatagaga aaggactgac ggatgcccgt tcgcatccgt
    12721 cagtattgca ggacggatta ttccgcgtcg ggctcttcag acttgtattt agcggcagtt
    12781 tctttgatca gctgctgcag ttcgccacgc tgatacattt cgatcacgat atcacaaccg
    12841 ccgaccagct cgccgtcaac ccacagttgc gggaaggtcg gccagttagc atatttcggc
    12901 agttccgcac gaatgtccgg attctgcaga atatcaacat aggcaaaacg ttcgccacat
    12961 gcggcaagcg cctggactgc ctgggcagag aaaccgcagc tcggcagttt cggtgaacct
    13021 ttcatgtaca gcaggatcgg gttttcagca atctggcgtt ggattttttc gatagtggtg
    13081 ctcattgtct tgcttcctca aacttcttta cggcagtaat ctgacattgt agcgggtcag
    13141 tgcggcatcg gaaaataaca ttttcatcac gcttttgcta ttttatccct ttgctctatt
    13201 tgttgcattt caaatattcg tttcttctct gatgccggca aactggcgta tttataacca
    13261 tttttagctt tcactgctgc atttttttgc gctcgccaac gaaacgtatt ttttaacaat
    13321 aaaagctatt aactttctct tcttctatgc attagaatca tcaagttttg taaatcagac
    13381 gcaggcatga tagacctgcc ttaacagagg gacgctcagt ggcgcggata aaccgtattt
    13441 cgatcacgct ctgtgcttta ctttttacca ccctgccttt aacgcctatg gcccatgctt
    13501 caaagcaagc cagggagagt tctgctacca ctcatatcac caaaaaagca gataaaaaga
    13561 aaagcacggc aaccaccaaa aagacccaga aaacagcgaa aaaagccgcc agtaaaagta
    13621 cgaccaaaag caaaaccgct tcttccgtta aaaaatcttc cattaccgct tctaaaaacg
    13681 ccaaaactcg cagcaaacac gccgtcaata aaacggcctc agccagcttt accgaaaagt
    13741 gtaccaaacg taagggctat aaatcgcatt gtgtgaaagt caaaaatgcc gcgtcaggaa
    13801 ctcttgccga cgcgcacaaa gcgaaggtgc aaaaagctac gaaagtggca atgaataaac
    13861 tgatgcagca aattggtaag ccatatcgtt ggggtggcag ctcaccgcgt accggttttg
    13921 attgcagcgg cctggtttat tacgcttata aagatttggt gaaaattcgt attccgcgta
    13981 cggcgaatga aatgtatcac ctgcgtgatg cagcgccaat cgaacgtagt gaactgaaaa
    14041 acggcgacct ggtctttttc cgtactcagg gacgcggcac agccgatcat gtcggcgtgt
    14101 atgtcggcaa cggcaaattt attcagtcac cgcgcacagg tcaggaaatt caaatcactt
    14161 ctctcagtga agactactgg cagcgccact atgttggcgc tcgtcgggta atgaccccaa
    14221 aaacacttcg ctaaaacttt accctgttgt tacggcaaca gggtaagttc atcttttgtc
    14281 tcacctttta atttgctacc ctatccatac gcacaataag gctattgtac gtatgcaaat
    14341 taataataaa ggagagtagc aatgtcattc gaattacctg cactaccata tgctaaagat
    14401 gctctggcac cgcacatttc tgcggaaact atcgagtatc actacggcaa gcatcatcag
    14461 acttatgtca ctaacctgaa caacctgatt aaaggtaccg cgtttgaagg taaatcactg
    14521 gaagagatta ttcgcagctc tgaaggtggc gtattcaaca acgcagctca ggtctggaac
    14581 catactttct actggaactg cctggcaccg aacgccggtg gcgaaccgac tggaaaagtc
    14641 gctgaagcta tcgccgcatc ttttggcagc tttgccgatt tcaaagcgca gtttactgat
    14701 gcagcgatca aaaactttgg ttctggctgg acctggctgg tgaaaaacag cgatggcaaa
    14761 ctggctatcg tttcaacctc taacgcgggt actccgctga ccaccgatgc gactccgctg
    14821 ctgaccgttg atgtctggga acacgcttat tacatcgact atcgcaatgc acgtcctggc
    14881 tatctggagc acttctgggc gctggtgaac tgggaattcg tagcgaaaaa tctcgctgca
    14941 taataactga tggcaaatgc agcattgcct gatgcgcttc gcttaccatg ccaacgcgga
    15001 tgaggcgtta acagcgcatt cggcaagata aatcgcacgt tgtcagcaac tgtaacgcag
    15061 aaggttatcc ttctgcgttt ttgtttaatt agctgttagc aacgcaaact gtttcaggtt
    15121 gttttctggc tgacataaac accagcaata atgccagtcc cgcgacaatc gctcccatca
    15181 ccggcacaaa gctgtatccc agcccagcgg aaattaccgc accaccagca gctgctccca
    15241 gcgcatttcc aagattaaag gcaccaatat tgactgatga agacagacct ggcgcttcac
    15301 tggcgacacg catcacgcgc atctgtaacg gcggtacgac cgcaaaggtt gctgcgcccc
    15361 acaccaccat gctaatagct gcgccgaact cattgcgggc caggaacggg attgccagca
    15421 taatcaccat caacaacaac aaaaagcctt tcaacgtgcc gttaactgaa cgatctgcca
    15481 gtttgccgcc gagatagtta ccgatagaga atccgacacc aatcagcacc agcattgccg
    15541 tgacgaacac cggtgttgcg tgggtaatac tttgcagtac cggagagata taggtgtaga
    15601 gagtaaacat tgcaccagct cccagtaccg tcgtcagcaa tgcagacagc acctgcggac
    15661 gcattaatac cgccagctct tttttcactt caggtcgtgc ccctgcacca cctttaggta
    15721 atgagaagaa cagacttacc attgaaatca ctcccagccc cgccgttgcc agaaatgaca
    15781 tccgccagcc gatggtttca cccaaccagg tcgccgccgg cacgccaccg atatttgcca
    15841 gggttaaccc cataaacata gtggcaactg cgctggcctg tttatgtttt ggcaccacgc
    15901 ttgcggccac gactgaaccc aaaccaaaaa atgctccgtg attcaggctg gtcaaaatgc
    15961 gtgaaagcat cagggtcata taatccggcg cgatggcgga aagtacgttg ccgagcgtga
    16021 aaattgccat caggaaaatc aacgcactgc ggcgggcacg atgagaaagt agaagcgtca
    16081 tcagcggcgc gccaaccatt acgccaactg cataggcact gattaacatt ccggcagcgg
    16141 gaatcgagac atccacaccg cgcgcaatga cgggcaacaa acccattggc gagaactccg
    16201 ttgtcccgat accaaacgcg ccaatcgcca gcgccagcaa cggatagtta attttcatgc
    16261 cttatctcca cctcttcgcg tcattacgcg atattcatta aagtggcgaa agcatgacag
    16321 caatcacaaa aaaatgaaaa taacaaaaag agaaaacact tttgccattt tgctaacaaa
    16381 caggaaggag atgcgaggga gaacgcgctc cctcgagagg aaatcagtgc agcgcggcag
    16441 tcaaacccac ggccacgatc aaaccgagga cgataatcgt tgttaccagt gaaaatttaa
    16501 ggtcggtgct catcaagttt tctccttttt tattaccaca caaatagtga tattacgcat
    16561 ttttacacac tgtgatgaaa aaatctcccg tcatttataa tgataagtgt ttttaccact
    16621 tccccttttc gtcaagatcg gccaaaattc cacgcttaca ctatttgcgt actggccatt
    16681 gaccccttcc tgacgctccg tgtcgttttt ccggcgtacc gcaacacttt tgttgtgcgt
    16741 aaggtgtgta aaggcaaacg tttaccttgc gattttgcag gagctgaagt tagggtctgg
    16801 agtgaaatgg aatggcaaca ataaaagatg tagcgaaacg agcaaacgtt tccactacaa
    16861 ctgtgtcaca cgtaatcaac aaaacacgtt tcgtcgctga agaaacgcgc aacgccgtgt
    16921 gggcagcgat taaagaatta cactactccc ctagcgcggt ggcgcgtagc ctgaaggtta
    16981 accacaccaa gtctatcggt ttgctggcga ccagcagcga agcggcctat tttgccgaga
    17041 tcattgaagc ggttgaaaaa aattgcttcc agaaaggtta caccctgatt ctgggtaatg
    17101 cgtggaacaa tcttgagaaa cagcgggctt atctgtcgat gatggcgcaa aaacgcgtcg
    17161 atggtctgct ggtgatgtgt tctgagtacc cagagccgtt gctggcgatg ctggaagagt
    17221 atcgccatat cccaatggtg gtgatggact ggggtgaagc aaaagctgac ttcaccgatg
    17281 cggtcattga taacgcgttc gaaggcggct acatggccgg gcgttatctg attgaacgcg
    17341 gtcaccgcga aatcggcgtc atccccggcc cgctggaacg taacaccggc gcaggccgcc
    17401 ttgccggttt tatgaaggcg atggaagaag cgatgatcaa ggtgccggaa agctggattg
    17461 ttcagggtga ctttgaaccc gaatctggtt atcgcgccat gcagcaaata ctgtcgcagc
    17521 cgcatcgccc tactgccgtc ttctgtggtg gcgatatcat ggcaatgggc gcactttgtg
    17581 ctgctgatga aatgggtctg cgcgtcccgc aggatgtttc gctgatcggt tatgataacg
    17641 tgcgcaacgc ccgctatttt acgccggcgc tgaccacgat ccaccagcca aaagattcgc
    17701 tgggtgaaac agcgttcaac atgctgttgg atcgtatcgt caacaaacgt gaagaaccgc
    17761 agtccattga agtgcatccg cgcttgattg aacgccgctc cgtggctgac ggcccgttcc
    17821 gcgactatcg tcgttaatca cccgttgcgg gagtctcttc cggctcccgc agccactcct
    17881 tattcagcgt ctcactatcg ccgagatact caagcagcca ggttaacgca ggcgacatat
    17941 cattttgctg ccatgtcaga caacatgccg aatccgggaa ggggttttcc aattcaagtg
    18001 ctacccactt cccctcatta agccacggtt tggcgaaatg tgttggcacc atccctatgc
    18061 ataatcctgc cgagatacag gttgccgatg attcccagtc aggcacgaca actctttttt
    18121 ggttatccag caaccaggta atacgtttag gtagcgttcg cgaggtgtct tcgcgcacca
    18181 acgacggcca gttgcgcaac gtatcatcgc tgaatgggcc atccatcaac gccagcgggt
    18241 ggtggctggc aacaacgcaa ctccagctta gcatccccat atcccggaag gcataacgac
    18301 cgcctaccgg aatcgcgcgt gttgcgccaa tcgccagttc cacgcgcccg tcggaaagcg
    18361 catcccagac accgttgaac acttcctgaa agacaagaag ttcgacatca tcaaaatggc
    18421 gataaaaatc aacgatcatc tgccgtgtac gttctggcct gacaatatta tccactgcga
    18481 tagctaactg accgcgccag ccgttcgcta tctgctgaca ttgctggcgg gtgatctgca
    18541 tttttttgac aacagagcgc ccttctttga gaaaccacgc tccagcagcg gtcagctcca
    18601 catcacggtg ccgtcgttca aagagcggca ccgccagcca ctcttccagc tgacgcacgg
    18661 tatagctgac cgcagaagga acgcgatgca gctcctgtgc cgcagcgcta aaactaccat
    18721 tacgcgctac cgcatcaaca acttcgagtg aatattctga ccacatagtc tgcctgcaaa
    18781 atttttgaaa ccagtcatca aatattaccg tttcacaaca ctaatttcac tccctacact
    18841 ttgcggcggt gtttaattga gagatttaga gaatatacat gcaacctggg aaaagatttt
    18901 tagtctggct ggcgggtttg agcgtactcg gttttctggc aaccgatatg tatctgcctg
    18961 ctttcgccgc catacaggcc gacctgcaaa cgcctgcgtc tgctgtcagt gccagcctta
    19021 gtctgttcct tgccggtttt gccgcagccc agcttctgtg ggggccactc tccgaccgtt
    19081 atggtcgtaa accggtgtta ttaatcggcc tgacaatttt tgcgttaggt agtctgggga
    19141 tgctgtgggt agaaaacgcc gctacgctgc tggtattgcg ttttgtacag gctgtgggtg
    19201 tctgcgccgc ggcggttatc tggcaagcgt tagtgacgga ttattatcct tcacagaaag
    19261 ttaaccgaat ttttgcgacc atcatgccgc tggtgggtct atctccggcc ctggctcctc
    19321 tgttaggaag ctggctgctg gtccattttt cctggcaggc gattttcgcc accctgtttg
    19381 ccattaccgt ggtgctgatt ctgcctattt tctggctcaa acccacgacg aaggcccgta
    19441 acaatagtca ggatggtctg acctttaccg acctgctacg ttctaaaacc tatcgcggca
    19501 acgtgctgat atacgcggcc tgttcagcca gtttttttgc atggctgacc ggttcaccgt
    19561 tcatccttag tgaaatgggc tacagcccgg cagttattgg tttaagttat gtcccgcaaa
    19621 ctatcgcgtt tctgattggt ggttatggct gtcgcgccgc gctgcagaaa tggcaaggca
    19681 agcagttatt accgtggttg ctggtgctgt ttgcagtcag cgtcattgcg acctgggctg
    19741 caggcttcat tagccatgtg tctctggtcg aaatcctgat cccattctgt gtgatggcga
    19801 ttgccaatgg cgcgatctac ccgattgttg tcgcccaggc gctgcgtccc ttcccacacg
    19861 caactggtcg cgccgcagca ttgcagaaca ctctacaact gggtctgtgc ttcctcgcaa
    19921 gtctggtagt ttcctggctg atcagtatca gcacgccatt gctcaccacc accagcgtga
    19981 tgttatcaac agtagtgctg gtcgctctgg gttacatgat gcaacgttgt gaagaagttg
    20041 gctgccagaa tcatggcaat gccgaagtcg ctcatagcga atcacactga tctatatcga
    20101 tatacttata cttaggctgc taacaaaatt ttgttgtatg attgaaatta gcggcctata
    20161 ctaatttcga gttgttaaag ctacgataaa tattatgttt ttacggggac aggatcgttc
    20221 ccgactcact atggatggtc atttcggcaa aggttcctcc tttccctctg ttctacgtcg
    20281 gattatagac tcgcggtttt ttctgcgaga tttctcacaa agcccaaaaa gcgtctacgc
    20341 tgttttaagg ttctgatcac cgaccagtga tggagaaact atgagttcat cgtgtataga
    20401 agaagtcagt gtaccggatg acaactggta ccgtatcgcc aacgaattac ttagccgtgc
    20461 cggtatagcc attaacggtt ctgccccggc ggatattcgt gtgaaaaacc ccgatttttt
    20521 taaacgcgtt ctgcaagaag gctctttggg gttaggcgaa agttatatgg atggctggtg
    20581 ggaatgtgac cgactggata tgttttttag caaagtctta cgcgcaggtc tcgagaacca
    20641 actcccccat catttcaaag acacgctgcg tattgccagc gctcgtctct tcaatctgca
    20701 gagtaaaaaa cgtgcctgga tagtcggcaa ggagcattac gatttgggta atgacttgtt
    20761 cagccgcatg cttgatccct tcatgcaata ttcctgcgct tactggaaag atgccgataa
    20821 tctggaatct gcccagcagg cgaagctcaa aatgatttgt gaaaaattgc agttaaaacc
    20881 agggatgcgc gtactggata ttggctgcgg ctggggcgga ctggcgcact acatggcatc
    20941 taactatgac gtaagcgtgg tcggcgtcac catttctgcc gaacagcaaa aaatggctca
    21001 ggaacgctgt gaaggcctgg atgtcaccat tttgctgcaa gattatcgtg acctgaacga
    21061 ccagtttgat cgtattgttt ctgtggggat gttcgagcac gtcggaccga aaaattacga
    21121 tacctatttt gcggtggtgg atcgtaattt gaaaccggaa ggtatattcc tgctccatac
    21181 tatcggttcg aaaaaaaccg atctgaatgt tgatccctgg attaataaat atatttttcc
    21241 gaacggttgc ctgccctctg tacgccagat tgctcaatcc agcgaacccc acttcgtgat
    21301 ggaagactgg cataacttcg gtgctgatta cgatactacg ttgatggcgt ggtatgaacg
    21361 attcctcgcc gcatggccag aaattgcgga taactacagt gaacgcttta aacgaatgtt
    21421 tacctattat ctgaatgcct gtgcaggtgc tttccgcgcc cgggatattc agctctggca
    21481 ggtcgtgttc tcacgcggtg ttgaaaacgg ccttcgagtc gctcgctaaa ggctattcta
    21541 tcgccccctc tccgggggcg atttcagatc aggcttctgt acctggttga ttcatggcat
    21601 tttctcgtgc cgccagcaca cgttctaccg tatctaccac tgcctgagtt tgtggatcaa
    21661 tttcaatgtt gacgcgtgcg ccgagttttt tcttcccaag agtcgtgcgt tccagagttt
    21721 ccggaattaa atggacgcaa aaacgcgttg gcgtgacttc gccgacggtc aggctaatac
    21781 cgtcgatgcc aataaatcct ttgtacagga tatatttcat caactgacta tcctggactt
    21841 taaaccagat ctggcgatta ttttccgagg ttaatatttt cgccacttca gcggtggtca
    21901 taatatgacc tgacattaag tgtccgccaa tttcatcact gaatttcgcc gcacgctcaa
    21961 cgtttaccca atcccccact tttaaatcgc caagattggt aatgcgtaac gtttctttca
    22021 tcaggtcaaa actgacatgg ttgccgttaa tttccgtcac ggtcaggcag caaccgttat
    22081 gcgccacgga agcacctgtt tccaggccgt ccagcatgtg gtcgggtaac tccaccacat
    22141 gcgtacgaaa atttggtttc tcgtcaatcg acaccagttt tgcggtgccc tgtacaatcc
    22201 ccgtaaacat acttacaact cctgaaatca gttaagacat tctgttcagc acaatagcag
    22261 gtggcaaacg cccttaccag tgaaggggta agaatgacta ttttttcact ggagaattaa
    22321 taaatcctcg ctacaataga ctgaatttcc cctgcttctt ctttttgctg cccattcagg
    22381 cggcttttta gtctctcata taactacaaa taaaaggtgt tcacgtgcag aagtatatca
    22441 gtgaagcgcg tctgttatta gcattagcaa tcccggtgat tctcgcgcaa atcgcccaaa
    22501 ctgcgatggg ttttgtcgat accgtgatgg cgggcggcta tagtgccacc gacatggcgg
    22561 cggtcgctat cggtacttct atctggcttc cggcgatcct ctttggtcac ggactgctgc
    22621 tggcattaac gccggttatc gcgcaattaa atggttccgg tcgacgtgag cgcattgcgc
    22681 atcaggtgcg acaaggtttc tggctggcag gttttgtttc cgttctcatt atgcttgtgc
    22741 tgtggaatgc aggttacatt atccgctcca tggaaaacat cgatccggct ctggcggaca
    22801 aagccgtggg ttatctgcgt gcgttgttgt ggggcgcgcc gggctatctg ttcttccagg
    22861 ttgcccgtaa ccaatgtgaa ggtctggcaa aaaccaagcc gggtatggta atgggcttta
    22921 tcggcctgct ggtgaacatt ccggtgaact atatctttat ttatggtcat ttcggtatgc
    22981 ctgagctcgg tggcgttggt tgtggcgtgg ctactgcggc ggtgtattgg gtcatgttcc
    23041 ttgccatggt ttcttacatt aaacgcgccc gctccatgcg cgatattcgt aacgaaaaag
    23101 gcaccgcgaa acccgatcct gcggttatga aacgactgat tcaactcggt ttgccgattg
    23161 cgctggcact attctttgaa gtgacactgt ttgccgtcgt ggctctgtta gtgtctccgc
    23221 tcggtattgt tgatgtcgca ggacaccaga ttgccctgaa ctttagttca ctgatgtttg
    23281 tgcttccaat gtcgctggcg gcagcggtaa ctatccgcgt aggttatcgt ctgggtcagg
    23341 gctcaacgct ggatgcgcaa accgctgcgc ggaccgggct tatggtgggt gtctgtatgg
    23401 caaccctgac ggccatattc acggtttcac tgcgggagca aatcgccctg ttgtacaacg
    23461 acaatcccga ggttgtaacg ctggctgcgc atttgatgtt gctggcggcg gtatatcaga
    23521 tttctgactc aatccaggtg attggcagtg ggattttgcg tggttataaa gatacgcgtt
    23581 ccattttcta tatcaccttt acggcttact gggtgctggg cttgccaagc ggctatattc
    23641 tggcactgac cgatctggtc gttgaaccta tggggccagc aggcttctgg ataggcttta
    23701 ttattggcct gacgtcggca gccattatga tgatgctgcg tatgcggttc ctgcaacgtc
    23761 tgccgtcagt tatcattctg caacgagcat cccgctaata aagacaaggc gcaaccttca
    23821 cgggttgcgc ctgtgttttt acgcaggctg gagcgttgcg ccaatcccgt cttcgtctgg
    23881 ctgtaatttc agagcgttgc acagagtttg ccgactggca tctgttatct caacgtgtat
    23941 atccccggta acttcccctt tcacattgat gaagtcaggt gagatttctt tcgcactggt
    24001 ttgcaggcaa atcgctccct ctccgcgcag gcgtttcact ttcagttgca catgcgttgc
    24061 cgcaccagtg atcagccaca gttttccgcc attcagattg atgttaccaa caataaaagt
    24121 gacaccgtca ccttttaccg tactgccgtc gagaatcaac acaccgccct gctgtacagt
    24181 aatcgttgat tgttgcagat ctgcgccata gccaataatc attgaagcgc cgtccagtaa
    24241 tgcaacactc ccggtcagtt caaccggtgc gcgatcttcc tctacgacaa aattttcgtc
    24301 cgcgctggtg ggtgacaaca ggatcactgt tccaccttgt attaccgcat tttccagcgt
    24361 accggcatgc acttcagccc gaccacccac attcacggac aggttttgcg tcttaccgga
    24421 actgtagagc tgaaggccat ccgtccccag acgataaatg gatccattct caacaatagt
    24481 gtcagagtct tcaccaccga gattattcat ggtgccacca gcaagcaacg tatcactggc
    24541 tttcccggcc agcataaaaa cgccgccctg attaatctca caattgctgg cttccccacc
    24601 tggatacacc aacaattcac caccttcatc taccacgacc gctgaggttg tcccattaac
    24661 caacaggccg ccctcttgat cgagaatgat tttttccgcg cgatgtcctt ccagtacacg
    24721 caggttaccg ccattttcca gcaacaaacc gcaggcataa ccctgatcaa cgctgaattc
    24781 accttcggga tggcggccat taaccgtagc gagcgtagag agactaattg cgcctccctc
    24841 ggactgaaca atatctgtgg caatggcacc gtcgctgacc gatagcgtgc cattgttacc
    24901 gtactgtgtg catttggcga tcccaccggt tgccactttc aaccagccag cccccgtgac
    24961 cacggtattt tcggctcttc cgccagcttc aacaatcaac tcgccttcag taagttgcgt
    25021 cgcgccaatg acctcgccgg tcttaacaat ttgcacattc ccgtcgctca tcaagttttt
    25081 cgcatcagat cccatgattt attcctttgc tgcatctgtg tgcctttatt gctacctaag
    25141 tgtaaaggct acggaggatt tatccacgac agatttgaga tggtggcaaa caactctgtt
    25201 taaactctga tacacgaatt attgggttgt atcagatgta aatgcgatcc tgaataaaaa
    25261 tcgcccttgc aaatcaacaa aatatagcca atttgcttaa aagctctgca aacggtcgaa
    25321 atagcgcaga aaattacgtt ttgcctcttg ccaccttccc actctgccgc taatattcgt
    25381 ccccgttgtc acctacaacg ttgcgttcat agctcagttg gttagagcac caccttgaca
    25441 tggtgggggt cgttggttcg agtccaattg aacgcaccat cctgcgtccg tagctcagtt
    25501 ggttagagca ccaccttgac atggtggggg tcggtggttc gagtccactc ggacgcacca
    25561 gattttctta atctggtctt ctcctttttc cctctgtttc ttctctgtat ccaatacgtt
    25621 aaaagattta cactgtcttc gtatgcgtta tcagaaggag aatcgctatg gcaactttgt
    25681 tacaacttca ttttgctttc aatggcccat ttggcgacgc aatggctgag cagcttaaac
    25741 cgcttgctga gtcgattaat caggaacctg gttttctgtg gaaggtatgg accgaaagtg
    25801 aaaagaacca cgaagccggt gggatctacc ttttcactga tgaaaaaagc gcccttgcct
    25861 atctggaaaa acacactgcc cgactgaaaa atctcggcgt tgaggaagtt gtcgccaaag
    25921 ttttcgatgt caatgagcca ctgagtcaaa tcaatcaggc aaaactcgcc tgacagaatt
    25981 taatcaaggg cggttagcgc ccttttcatc cctgtctgaa atttctcaaa ttctaaaaat
    26041 ctcaaccaaa cttatctgat aacactaaat tcgaaagaat gcgtacaggt aagtaacaat
    26101 gaaaaaaatt gctattgtgg gtgccgggcc tacggggatc tacaccttat tctcgcttct
    26161 acagcaacaa actccacttt ctatttctat cttcgagcag gctgacgagg ccggtgtcgg
    26221 gatgccatac agtgatgagg aaaactcaaa aatgatgctg gcaaatattg ccagtattga
    26281 aataccgccg attaattgta cgtatctcga atggctacaa aagcaagaag ccagccatct
    26341 ccagcgttat ggcgttaaaa aagaaacctt gcacgatcgt cagtttttac cgcgaattct
    26401 gctgggcgaa tatttccgcg atcaattttt acgattagta gaccaggcac gacagcaaaa
    26461 atttgcagtg gctgtttatg aatcatgcca ggttaccgat ctgcaaatta caaatgctgg
    26521 cgtcatgctc gctacaaatc aggatttacc cagcgagacg tttgatttag cggtgattgc
    26581 cacgggtcac gtctggcctg atgaagaaga agcaaccaga acgtattttc ccagtccgtg
    26641 gtcaggcctg atggaagcaa aggtcgatgc gtgtaacgtg ggtattatgg gaacatcctt
    26701 gagcggactg gatgcggcaa tggcagtggc tattcagcat ggttcgttca ttgaagatga
    26761 taaacaacac gtcgttttta accgcgataa cgcaagtgaa aagctaaata ttacgttgat
    26821 gtcgcgcacg ggtattttac ccgaagccga tttctattgc cctattccct acgagccctt
    26881 acacatcgtc accgatcagg cattaaatgc tgagattcaa aaaggtgaag agggcctttt
    26941 ggatcgggta tttagattga tagtagagga aatcaagttt gctgatccag actggagcca
    27001 acgcatagcc ttagagagcc tgaatgtcga ttcctttgct caagcctggt ttgccgagcg
    27061 caaacaacgc gacccatttg actgggcaga aaaaaatctc caggaagtcg aacgcaataa
    27121 acgagaaaaa catactgttc cctggcgtta tgtcattctg cgcctgcatg aagccgtaca
    27181 ggaaattgtt cctcatctga atgaacacga ccataaacgg ttcagtaaag gccttgccag
    27241 ggttttcatc gataattatg cggcaatccc ttcagagtct attcgtcgcc tacttgcctt
    27301 acgtgaagcg ggaatcattc atattctcgc cctcggtgaa gactacaaaa tggaaattaa
    27361 tgagtcgcgc accgtcctga aaacggaaga caacagctac tcgtttgacg tttttattga
    27421 tgcccgcgga cagcgtccgc ttaaagtgaa agatattcct ttccctgggc tacgcgagca
    27481 attacagaaa acaggggatg aaatccctga tgttggcgaa gattatacgt tacagcaacc
    27541 cgaagatatt cgtggacgcg tagcgttcgg cgcgttgccc tggttgatgc acgaccagcc
    27601 tttcgttcag ggacttacgg catgtgcaga aattggtgag gcgatggctc gggcggtcgt
    27661 aaagcctgca tcccgtgctc gtcggcgtct ttcgtttgat taaaggtaaa gctatcagca
    27721 ctcaacaaac tgatgctgtt cattaagacg atagcggact ccggttcgaa tattgttttc
    27781 accttcaatg gcgacggcga agcgaactct ttcgccgtca tgatatgcca gtgcggcgct
    27841 tccccctggc ccgagaataa ttgagtcgac cacgcccgtg ctcactaccg ttgaattttc
    27901 accgctggca atgatgtgta cattgtcgcc gctgttggca attctggcgt ttgcgccaaa
    27961 gctggcgatt tgcaccaggt caccattact ggcgacatga caccgttcac ccaatgtaca
    28021 aacgcgtact cgcattccgg tattcgcaat ccgactacta tctccagcgc tgcttatccg
    28081 cgaagaatta ccggttacag caacccgtgc gcgttcaccg gagctgccaa tgtgactgtt
    28141 aaagccgaca cttccaatcc gcacgctata acccatactg gcaatttgcg cggcataccc
    28201 agcggttgcg attcgggcgt tatcctcaca acagccgatg cgagcatgat cgtcgctgcg
    28261 ggcaaactga ctgcaaaatg gtatctctcc ggggtctgtg gccagttttt gcatagagga
    28321 aacttcctga tgcgcgaagt tttcatccgc cagccatttt ttccacgcat actcaaccag
    28381 actctccgcc cagtccgtat atccttcctc aatcagtgca tgatgaatat cggcataact
    28441 accgccgcgt gggaaatggc gcaggaacca gcgatacatc accgctccga tacgccattc
    28501 tcgcaggtct gctcgtgtaa tgatcattcg ttagtgccgg tgatagccat cgaccatgct
    28561 tttaaaggtt tcgtgtggcg tacgccccgt ggtgcaaaga taaagatgac cgaagataaa
    28621 aaagaggctt ataaatgcca gagcaaaatg cgcctgcaat aaccagtatc ttacgccagg
    28681 aaacacatct cccacggctt gcggatagag acacagcagc cccgtcaata gtaacaacgg
    28741 cagcaatcca tacataacac caacataggc gacctgctgt aagggattaa atttagactg
    28801 ggttgttgcc gggaaaggat gttcttcccc ctgcataatg ccaaacaaat aaaatcgcgt
    28861 ttgttttgcc gctcgctcca gccacccctg acgacgaatg cgatagtggt gaccattacc
    28921 cccaacggca ttgatcagca caaagccgag ccagcatgcc agtaacaaaa atccgcaaac
    28981 ttcatgcacc gcaaccagac ttttaaccgc agttgcgccc accagcgcaa agtgatttat
    29041 cagcccactt gccagcaaca atacaaagag taacgcattc gaccagtgcc ataatctgac
    29101 cgctttgcag taaagataaa tcttctcacc ataatcggtg actgatttct tcacgccacg
    29161 agcacgaagc aaggcatgca gccccagcac caaccacatc ccaaccagca atactccggc
    29221 aatgatcaac cacaccggcc aaaattcggg agtgaactgt ggcacatagt tcgctaactg
    29281 gctctgaaac tgttcagcat gttgcgacgg gttcatacat tttccttttt aatcaaatgt
    29341 tgaccgaacc ggcgatacag atgcggtttc ccggcaccag gtagctgata ttgatagtat
    29401 ttattatcct gcaaccacgc ctgaatttct gggctatctt cgcgaccaaa gatcaatgcg
    29461 tgttccgggc aggcgctgac gcaaatgggc ggaaagcctt ttgccagtcg ggactcagcg
    29521 cagaaatcac atttatctgc cactttagtg acagggttaa ggtagcgaac ctggtacgga
    29581 caagcgccaa tgcaataact gcagccgatg cactgcgatt tttctacccg cacgatcccc
    29641 tgctcatcac gccacgacgc ccctgtcggg catacgtcga tgcacggagc atcttcgcag
    29701 tgctgacatg actggcgaaa aaagtgatac tgcgtttcgt tgtcgttatc ggtgactgga
    29761 atgtgtgcta tcgataaacg gcttccctga gcggggacgt ggttagtttt acggcatgcg
    29821 cgggcgcaaa tattacagcc attgcaccgt gactcgtcat gaatcatggc ataccgaact
    29881 tccttttctt gcctcgtgtt cgctaacaga gaagacgcag aaccagtaaa aaagattact
    29941 gttcccatcc ccagaacaaa tttgcgtcga gtgaaggaca tctgattatc ccctaatgca
    30001 gtggctgcaa ctgtccaccc tatccatgac atctccctga aatttcaggg gttctgaaac
    30061 tgctctacct cgaaccattc gcataagcca taagccttgc cataggtcat aaatcgctcg
    30121 ctaaacaagt acaacaccgc cgtcgatgac tccacctgcc gtatatcggc atattcaggt
    30181 gcaacatcca tcgcggcgat cgcggcttca atctgcgctt cctggaagta atatggcgct
    30241 tgcatcagca tggcgacttt gtaaggacga ggatatgtct ggcactcaaa acgaacggcg
    30301 tgtgcaatgg cgcgacaaat gtcctgctcc acaacttgca aagacatcgc cgcgtagttt
    30361 tcactcatgg cctgcgttga gtaatagtaa tcatcctggc ttcccgtcat acaagcgata
    30421 tcagcgtagt ctccgttctg cttaatgctt tccagcaaaa ctgacagttc ctcttctgca
    30481 accgaatagg gtggcgagag aaacacggcg cgcgccacca gctgcccagc cacagaatgc
    30541 tggcgaatga actctgccag gatttcagcc ggttctggtt cggttaccgt atcaacgggg
    30601 tgacgcatcc cctgtaacca ttgccgcttc gcctcgtcaa cttcgctgac tttcgctaac
    30661 ggcaattcat cccgatggtt catctcaccc attccttacg caggcagtag attgtgtgct
    30721 gccagatcgg cggcaatatc ttccagcccc agacgctgca atgtttcgcg ggtcggacaa
    30781 ccaagctgtg ggtcccagcc catttctttg tagaacatcg tgagcgaagc atgcatatcg
    30841 tcacgatcca ttttgtcagt accttcagta aagaccggga tctgcggatc cttgtcgaat
    30901 acccaggaac agataagatc gtgttcatta cgcatatctt tggtttgcat cagttttacc
    30961 gtgtaggcac gatgcaacgt aaagatacgc tctgcagcta aatctaattt ttcctgagtc
    31021 atctcttcgc cggtgatcgc tttgaagaat ttggcttcaa gcgccagatc gccccggtaa
    31081 ttacggcttt tcagcggcga aacggtcatt ggccagaccc agttgcacag ggtgacggcg
    31141 ttatgcaaac agacccgcaa cagcgaccac tttgcatatt taatttttgc gtcattgatt
    31201 ggcgtgtagt ttttggtttc atcgtaggca tcttcagaac caaaaagctc tttcgccact
    31261 tcacgctgca gtttcaatgg caaacccgaa ccaataaaat tgatatgggt atgcgtcatg
    31321 cagtcacggt tgaacataca gttaacaatg gaaccgacct gcgctgacgc ttcattggca
    31381 tggtgaaccg gatagccaaa cggcgaccag agtttatttt ttgcgtagcc ccagtactct
    31441 tcacccaaat tccagcgttc tgcgatggca tatgaaccat cagccaggtg actcagctca
    31501 cccacacgat gcgccagacg gtagtaaaaa tctttaatga aattaacgtc acccgcttcc
    31561 agttgatccc agtgaatttc cgcatactct tcagctggca gaacacgctt gaacacccct
    31621 ttgctgtaac aataagtaaa gtcgcgatgc agctgcccgt agttacacca taggccgtag
    31681 tcatcgaaca aattcagacc aaccaggtta ccaatcacac gaccatcgtc tttatcttca
    31741 aaatctttcg gcccgttcgg gaagatggtg gtatggacaa agttggctac acaagtgtta
    31801 ccacctgtgc tgggcacgcc aaactctttc acccgaggaa tattcatttg ggtcatacaa
    31861 cggatcgggc aagagtggca gccactcatt tttactgtgt atttctctgc cgccggacct
    31921 aagtcaaaaa cggatttata ggtacgaaag ccgaccgtgt tctgattgcc tggcggaatt
    31981 tcccccgttt caatcggacc accttcagcc gcgccccaaa acagcccttt acgtgctgtc
    32041 caacgtgact tgggatctga atactctgcc cacgattgcg gcgtacttgg cacgacatgg
    32101 ttgttattcg caccaataag ttcagtcatc atgtaatcgt tgagacgctt catctcctga
    32161 cgatcggcaa tgttgacccc tttcgtccct tcaaccgcaa tcgctttcag gtttttcgaa
    32221 cccataattg cgccagttcc cgcaccgccg ctgtggttac ggctattcaa catgccagag
    32281 agaggaacaa ggttttcccc agcctgacca atagccgcca cacaggtttc cggactggtc
    32341 aatcgacaaa tttcttccgt cgttgcgcgc gtcccttttc cccataagaa atcggctttt
    32401 tccaggctaa ctttgtcatc tttaatcttc agccataccg gtgatttcgc cttcccttcg
    32461 ataataatga cgtcgtatcc agcgaatttc atttgcgctg caaaaaagcc acccatatgg
    32521 gcatcgacaa ctaaatttcc tttggtaaaa gtagaaagtg aggtgatatt tacgcgagaa
    32581 ctacaggggg caccagatcc agttaatggg ccggtagcaa agactaattt attcgcttca
    32641 tcgaaaggtt tcgtgcctgg cggtacttcg tcatacataa ttttgtagcc gaagcccatg
    32701 ccaccgacaa aacttttaaa cttgctggaa tcttcgaggg taatatttcc tgtcgtgaga
    32761 ttgactctta atatattacc tgtccaaccg ttagccatga ttttttcctt tgcaagattc
    32821 acacagtaat atctttccac tcgataattt ttaacgcccc tgttgggcag gcgtttgcgc
    32881 attcaccgca taacacacat ttcgaggatt ttttactttc ggtatttacg gtggccatca
    32941 tccacgggca tgccgtagta caggcgctac agccaataca gcgtttatga tcgacggtaa
    33001 tacagccttc tttctgctgc caggtaatcg caccaatcgg gcagacgttc atgcattgcg
    33061 gctctttgca ttgacggcag gtgtccgcgg tatagttgag atcgccatac aggccgccgc
    33121 cagagccaac cccgttgtcg ccaaagaaat aattgcggtg gattttgata cgggagaaga
    33181 atgtccctac tgagccatcg ttgaagttgg tacaagagat ttcacagcgg tggcaacccg
    33241 tgcatcgcgc tcgctgggtc accagcaccc ctttgggtgt atttatcaac cctactgtgc
    33301 cgctatcaat atcttcctgt ttgcaaccca aaagtgacag taatgcaggg gcaattgtta
    33361 gaccagcaag gccttttcct gatatacgca agaattctaa tcgcgttaag ccaatatcta
    33421 atagtggacg atcaaccggg ttcatttatt tcgcatcctc ttcgcaaaca cagtgctgac
    33481 aattcagcag cctgatatta agcattcaac taatacgctg ctgactctgt ccccaacacc
    33541 agatattttc cctaacccga tagtgtatga gaaaagattt aacgccgata aactaatcct
    33601 ttatggttag gagaaaaaat aatgtgatta ttctgagccc ttaacattga tcgttat
//
LOCUS       DAPGWB010000035        32402 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.035, whole genome shotgun sequence.
ACCESSION   DAPGWB010000035 DAPGWB010000000
VERSION     DAPGWB010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 32402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32402
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.035"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(82..1842)
                     /locus_tag="RHX79_001629"
     CDS             complement(82..1842)
                     /locus_tag="RHX79_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HDV2196816.1"
                     /translation="MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVW
                     SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH
                     YPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
                     QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE
                     IPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGA
                     HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL
                     FKQDADYPFVDWNFSGTTEEEFATLMAIFKKEDKEVYIADYEHLGVYACRIIVPGMSD
                     IYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLG
                     LATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQ
                     TLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAH
                     QSLLKAYEKLQRAKAAFWAK"
     gene            1972..2664
                     /locus_tag="RHX79_001630"
     CDS             1972..2664
                     /locus_tag="RHX79_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF421 domain-containing protein"
                     /protein_id="HDV2196817.1"
                     /translation="MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRG
                     VRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLE
                     DLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS
                     VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANP
                     EWTKASRAKRVT"
     gene            2863..3951
                     /gene="serC"
                     /locus_tag="RHX79_001631"
     CDS             2863..3951
                     /gene="serC"
                     /locus_tag="RHX79_001631"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HDV2196818.1"
                     /translation="MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGK
                     EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYW
                     AASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID
                     ETPDFGKDVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKA
                     NIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL
                     YGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGM
                     RASIYNAMPLEGVKALTDFMVEFERRHG"
     gene            4022..5305
                     /gene="aroA"
                     /locus_tag="RHX79_001632"
     CDS             4022..5305
                     /gene="aroA"
                     /locus_tag="RHX79_001632"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDV2196819.1"
                     /translation="MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNL
                     LDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPL
                     AAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGG
                     NVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ
                     HYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRF
                     ADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNI
                     YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFS
                     LVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA"
     gene            5474..6238
                     /gene="ycaL"
                     /locus_tag="RHX79_001633"
     CDS             5474..6238
                     /gene="ycaL"
                     /locus_tag="RHX79_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706828.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase YcaL"
                     /protein_id="HDV2196820.1"
                     /translation="MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATL
                     SDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTLVNYKVYMTSD
                     VNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDA
                     ISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSF
                     EKLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK"
     gene            6411..7094
                     /gene="cmk"
                     /locus_tag="RHX79_001634"
     CDS             6411..7094
                     /gene="cmk"
                     /locus_tag="RHX79_001634"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HDV2196821.1"
                     /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA
                     LAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQ
                     VAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
                     QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQ
                     YARQKLALA"
     gene            7205..8878
                     /gene="rpsA"
                     /locus_tag="RHX79_001635"
     CDS             7205..8878
                     /gene="rpsA"
                     /locus_tag="RHX79_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDV2196822.1"
                     /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS
                     ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY
                     EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD
                     QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE
                     GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD
                     IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH
                     LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK
                     GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV
                     DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE"
     gene            9038..9322
                     /gene="ihfB"
                     /locus_tag="RHX79_001636"
     CDS             9038..9322
                     /gene="ihfB"
                     /locus_tag="RHX79_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HDV2196823.1"
                     /translation="MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIE
                     IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG"
     gene            9529..11793
                     /locus_tag="RHX79_001637"
     CDS             9529..11793
                     /locus_tag="RHX79_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309023.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC family protein"
                     /protein_id="HDV2196824.1"
                     /translation="MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPV
                     KTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQ
                     GRRIFPAPGLVLYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL
                     TGRFLQASVIEPNCSLRAQYLASLQTTLQPYMWNAVILGLGMGERLSVPKEIKNIMRD
                     TGTAHLMAISGLHIAFAALLAAGLIRGGQVYLPGRWIHWQMPLIGGICCAAFYAWLTG
                     MQPPALRTVVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAV
                     AALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANL
                     LAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIA
                     ERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVYMLDVGQ
                     GLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGL
                     DSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSVHWPLQASNDKGNNHSCVVK
                     VDDGTNSILLTGDIEVPAEQKMLSRYWQQVQTTLLQVPHHGSNTSSSLPLIQRVNGKV
                     ALASASRYNAWRLPSNKVKHRYQQQGYQWLDTPHQGQVTVNFSAQGWRISSLREQILP
                     RWYHQWFGVPVDNG"
     gene            11830..13578
                     /gene="msbA"
                     /locus_tag="RHX79_001638"
     CDS             11830..13578
                     /gene="msbA"
                     /locus_tag="RHX79_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HDV2196825.1"
                     /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFM
                     LSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRR
                     RLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM
                     FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVL
                     IFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM
                     DSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRV
                     IERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF
                     YDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQI
                     EEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT
                     SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLL
                     EHRGVYAQLHKMQFGQ"
     gene            13575..14561
                     /gene="lpxK"
                     /locus_tag="RHX79_001639"
     CDS             13575..14561
                     /gene="lpxK"
                     /locus_tag="RHX79_001639"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDV2196826.1"
                     /translation="MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRA
                     PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTT
                     TAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVE
                     IVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNL
                     RTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALV
                     SAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTSLASGN"
     gene            14598..15830
                     /locus_tag="RHX79_001640"
     CDS             14598..15830
                     /locus_tag="RHX79_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaQ family DNA glycosylase"
                     /protein_id="HDV2196827.1"
                     /translation="MSLPHLSLADARNLHLAAQGLLNKPRRQASLEDIPATISRMSLL
                     QIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRH
                     RMLAPEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH
                     KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARS
                     LGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHADLLPLLERAL
                     AGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQ
                     LVGRMDAKMHRQTGILEVISLWLQEGIKPTTMLQKGLRQAITDFASWQQATRVTLGRC
                     PQGLFTDCRTGWEIDPVA"
     gene            15882..16064
                     /gene="ycaR"
                     /locus_tag="RHX79_001641"
     CDS             15882..16064
                     /gene="ycaR"
                     /locus_tag="RHX79_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YcaR"
                     /protein_id="HDV2196828.1"
                     /translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV
                     LLETEARVLTADESKS"
     gene            16061..16807
                     /gene="kdsB"
                     /locus_tag="RHX79_001642"
     CDS             16061..16807
                     /gene="kdsB"
                     /locus_tag="RHX79_001642"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDV2196829.1"
                     /translation="MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGADR
                     IIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEP
                     MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI
                     PWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYG
                     EKIHVAVAQEVPGTGVDTPEDLERVRAEMR"
     gene            16961..17854
                     /locus_tag="RHX79_001643"
     CDS             16961..17854
                     /locus_tag="RHX79_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbJ family phosphotransferase"
                     /protein_id="HDV2196830.1"
                     /translation="MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLM
                     ARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEA
                     PARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLN
                     QFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMV
                     GPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVN
                     TGRFSRRNFDLASKSLLPWLA"
     gene            complement(17831..18610)
                     /gene="elyC"
                     /locus_tag="RHX79_001644"
     CDS             complement(17831..18610)
                     /gene="elyC"
                     /locus_tag="RHX79_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope biogenesis factor ElyC"
                     /protein_id="HDV2196831.1"
                     /translation="MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFIS
                     IGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLI
                     NNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD
                     LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPL
                     NPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGSSGEPRQE"
     gene            18746..19531
                     /gene="cmoM"
                     /locus_tag="RHX79_001645"
     CDS             18746..19531
                     /gene="cmoM"
                     /locus_tag="RHX79_001645"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine 5-oxyacetic acid(34)
                     methyltransferase CmoM"
                     /protein_id="HDV2196832.1"
                     /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDHVLAEMGPQ
                     KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA
                     QDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM
                     VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREK
                     HQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV"
     gene            19528..20850
                     /gene="mukF"
                     /locus_tag="RHX79_001646"
     CDS             19528..20850
                     /gene="mukF"
                     /locus_tag="RHX79_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HDV2196833.1"
                     /translation="MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLD
                     GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR
                     LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPL
                     KYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL
                     QDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG
                     YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALR
                     DEEVTGELPEDLEYEEFNEIREQLAAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRA
                     RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY"
     gene            20831..21535
                     /gene="mukE"
                     /locus_tag="RHX79_001647"
     CDS             20831..21535
                     /gene="mukE"
                     /locus_tag="RHX79_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HDV2196834.1"
                     /translation="MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNH
                     AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL
                     YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN
                     RLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQ
                     LNDETEENQPDSGEEE"
     gene            21535..25995
                     /gene="mukB"
                     /locus_tag="RHX79_001648"
     CDS             21535..25995
                     /gene="mukB"
                     /locus_tag="RHX79_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HDV2196835.1"
                     /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM
                     AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV
                     GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAM
                     EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR
                     DYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMR
                     HANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAAS
                     DHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQEENEARAEAAELEV
                     DELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADSAAEWLETFQAK
                     ELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQ
                     RHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARI
                     ASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTS
                     SQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFG
                     GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLEGLTDCPEDLYLIEGD
                     PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLS
                     ERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHE
                     NDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQ
                     FGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSY
                     SDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDT
                     KKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAE
                     MDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDL
                     RSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQDIIR
                     TDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGL
                     QNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN
                     PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL
                     VMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPE
                     NISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGSDEAPSQAS"
     gene            26256..28103
                     /gene="ldtD"
                     /locus_tag="RHX79_001649"
     CDS             26256..28103
                     /gene="ldtD"
                     /locus_tag="RHX79_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HDV2196836.1"
                     /translation="MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAV
                     SEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARD
                     MQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGY
                     LHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYA
                     AMHESLLALLSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGD
                     DTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGL
                     GADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNG
                     NQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESH
                     GYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYL
                     HDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNI
                     RQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQIVSKAEQLIR"
     gene            28284..28832
                     /locus_tag="RHX79_001650"
     CDS             28284..28832
                     /locus_tag="RHX79_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HDV2196837.1"
                     /translation="MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNN
                     LHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTR
                     KPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRA
                     GGVGYYPRSNFVHIDTGPARHW"
     gene            28859..29506
                     /gene="gloC"
                     /locus_tag="RHX79_001651"
     CDS             28859..29506
                     /gene="gloC"
                     /locus_tag="RHX79_001651"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003035823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase GloC"
                     /protein_id="HDV2196838.1"
                     /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDD
                     SGLTLIQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEEC
                     QPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGR
                     SDFPRGDHNQLISSIKDKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW"
     gene            complement(29728..30918)
                     /gene="aspC"
                     /locus_tag="RHX79_001652"
     CDS             complement(29728..30918)
                     /gene="aspC"
                     /locus_tag="RHX79_001652"
                     /EC_number="2.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009653304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate transaminase"
                     /protein_id="HDV2196839.1"
                     /translation="MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTP
                     VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPG
                     GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD
                     ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA
                     RGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK
                     AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA
                     NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI
                     VAVL"
     gene            complement(31103..32191)
                     /gene="ompF"
                     /locus_tag="RHX79_001653"
     CDS             complement(31103..32191)
                     /gene="ompF"
                     /locus_tag="RHX79_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpF"
                     /protein_id="HDV2196840.1"
                     /translation="MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHY
                     FSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
                     TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVAT
                     YRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADR
                     TNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKT
                     QDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVD
                     YIINQIDSDNKLGVGSDDTVAVGIVYQF"
BASE COUNT         7888 a         7873 c         8725 g         7916 t
ORIGIN      
        1 tgtaaagcgg ggcattaaaa aaacgccccg taatataact cagactaatc attaagccta
       61 cattgcgtag gctatttgat tttattttgc ccagaatgct gctttggcgc gctgcagctt
      121 ttcgtaggcc ttcaacaacg actgatgtgc agcaaacgcg tgcagatcgc tatctaccgg
      181 ttgcaggccg taaaacgccg cttcgccgct cattgccgca ctggcggctt ctacggcatc
      241 tgcgccgtac atgcgaacaa acgcattcag atattgcagc ggctggcgat cttcttcctg
      301 tgccagtaat aacaacgttt gcaggcagcg ataatagttg gcgcgttccg gactaaatac
      361 tgatgagtta aactccatcg tccattcggt ccagaccaga gcctgttcca gatcgccacc
      421 agccagcgcc agcatggctt ttaattcacc gatacgcagg gtgtaccaac cgttatccga
      481 cccggtcgcc agacccaaca gctcacgcac gcgggtaaag tcatcaaaac cttcttcatc
      541 cagttgctcg atgaggttca ggtaatcttc tttttcccac tcgctgcctg gtagcgaaag
      601 aatcgtttca cgtaaatggc tgcccatact gttattcgcg agccacagat cttcagccgg
      661 ataaatatcg gacatgccag gcacgataat gcggcaagcg tagacaccca gatgctcgta
      721 atcggcaata taaacttctt tatcttcctt tttgaagata gccatcagcg tggcgaactc
      781 ttcttccgtg gtgccggaga aattccagtc cacaaacgga taatcggcat cctgcttgaa
      841 caggtcccag gagattaaac cgctggaatc gataaagtgc gtttcgaggt tggtatgttc
      901 agcgacttct tcatcatcga aggttggcgg agtaaacaca tccaaatctt tcaggccacg
      961 accttgcagc agctcggtca cggtacgttc cagtgctacg ccaaaatcag gatgcgcacc
     1021 gaaagaggca aagcaggtac cgttagcagg attgaacagt accacgcaaa tcaccggata
     1081 ctggccgcca agcgaaccgt cataagcgaa gattgggaaa ccctccgctt ccagcgtttc
     1141 gatggcttca actactgctg ggtaacgcgc cagcacgtct gccgggatct ctggcaggct
     1201 gatgctttca gcaataatgc ggtttttcac gtagcgttcg aaaacttcag acaatccctg
     1261 aacgcgtgct tcgttgcggg tattacctgc ggacataccg ttggagacgt acaggttacc
     1321 aatgatattc atcggaatat aaacggtctg attgtcggac tgacgcgtaa acggcaggcc
     1381 gcaaatacca cgatcttcgt taccggattg taggtcaatc agcatgctgc cggtcagttc
     1441 attctccgga tcataaaacg cgcgcagacg gtcatcgagt agtccttctg gcacatcgtc
     1501 attttcggtc agtgggaacc atttttcgtt gggataatgc acgaacggac cgttggcgat
     1561 ggtttcgccc agccagaaat cagcaaaaaa gtagttggtt gagagacgct cgaaatattc
     1621 accaagtgca gaagccagcg ccgctttttt ggttgcgcct ttaccgttgg taaaacacag
     1681 tgcgcactct ttgtcgcgaa tatgtacaga ccagacgtta ggcacaggat tcagccagga
     1741 ggcctcttca atctgaaagc cgaggtctga aagtttttgc tggaagcgag cgatggaatc
     1801 ttccagagcg gcatctttgc cggggataaa tgtttgcgtc atgaaaatca ctttagtcgt
     1861 acggaaagcg cgcaataata cgggttttat ctcaaaggcg ctatcaccgc cgccatgccg
     1921 atgaactgtt gactatgctt ttagcggata aaccacgata agagcataaa aatgaaggcg
     1981 ttcgatctcc accgtatggc atttgataaa gtgccttttg atttccttgg cgaagttgca
     2041 ctacgtagtc tttatacctt tgtactggtt tttttgttcc tcaaaatgac cggaagacgc
     2101 ggtgtgcgac agatgtcgct gtttgaagtg ttaatcattc tcacgctggg ttcagcggcg
     2161 ggagatgtgg cgttttatga tgatgtgccg atggtgccgg tacttatcgt ctttatcact
     2221 ctggcgttgt tataccgcct ggtaatgtgg ttgatggcgc acagtgaaaa actggaagat
     2281 ttactggaag gtaagccggt tgttattatt gaagatggcg agctggcctg gtcgaaactc
     2341 aataactcca acatgacgga atttgagttc tttatggagc tacgattgcg tggcgtggag
     2401 cagctggggc aggtacgtct ggcgattctc gaaaccaacg ggcaaatcag tgtctatttc
     2461 tttgaagatg acaaggtgaa accgggttta cttattttac ccagtgattg tacgcagcgt
     2521 tacaaagtgg tgccggagtc ggcggactat gcctgtattc gttgtagtga aatcattcat
     2581 atgaaagcgg gggaaaaaca attatgtccg cgctgtgcaa atccagaatg gacgaaggca
     2641 agtcgggcaa aacgggtgac ctgacagtaa aaacatcggc tttttgctaa taatccgaga
     2701 gattcttttg tgtgatgcaa gccacatttt tgccctcaac ggttttactc attgcgatgt
     2761 gtgtcactga atgataaaac cgatagccac aggaataatg tattacctgt ggtcgcaatc
     2821 gattgaccgc gggttaatag caacgcaacg tggtgagggg aaatggctca aatcttcaat
     2881 tttagttctg gtccggcaat gctaccggca gaggtgctta aacaggctca acaggaactg
     2941 cgcgactgga acggtcttgg tacgtcggtg atggaagtga gtcaccgtgg caaagagttc
     3001 attcaggttg cagaggaagc cgagaaggat tttcgcgatc ttcttaatgt cccctccaac
     3061 tacaaggtat tattctgcca tggcggtggt cgcggtcagt ttgctgcggt accgctgaat
     3121 attctcggtg ataaaaccac cgcagattat gttgatgccg gttactgggc ggcaagtgcc
     3181 attaaagaag cgaaaaaata ctgcacgcct aatgtctttg acgccaaagt gactgttgat
     3241 ggtctgcgcg cggttaagcc aatgcgtgaa tggcaactct ctgataatgc tgcttatatg
     3301 cattactgcc cgaatgaaac catcgacggt atcgccatcg acgaaacgcc agacttcggc
     3361 aaagatgtgg tggtcgccgc cgacttctct tcaaccattc tttcccgtcc gattgacgtc
     3421 agccgttatg gcgtgattta cgctggcgcg cagaaaaata tcggcccggc tggcctgaca
     3481 atcgtcatcg ttcgtgaaga tttgctgggc aaagcgaata tcgcgtgtcc gtcgattctg
     3541 gattattcca tcctcaacga taacggctcc atgtttaaca cgccgccgac atttgcctgg
     3601 tatctatctg gtctggtctt taaatggctg aaagcgaacg gcggtgtagc tgaaatggat
     3661 aaaatcaatc agcaaaaagc agaactgcta tatggggtga ttgataacag cgatttctac
     3721 cgcaatgacg tggcgaaagc taaccgttcg cggatgaacg tgccgttcca gttggcggac
     3781 agtgcgcttg acaaattgtt ccttgaagag tcttttgctg ctggccttca tgcactgaaa
     3841 ggtcaccgtg tggtcggcgg aatgcgcgct tctatttata acgccatgcc gctggaaggc
     3901 gttaaagcgc tgacagactt catggttgag ttcgaacgcc gtcacggtta atgccgaaat
     3961 tttgcttaat ccccacagcc agcctgtggg gtttttattt ctgttgtaga gagttgagtt
     4021 catggaatcc ctgacgttac aacccatcgc tcgtgtcgat ggcactatta atctgcccgg
     4081 ttccaagagc gtttctaacc gcgctttatt gctggcggca ttagcacacg gcaaaacagt
     4141 attaaccaat ctgctggata gcgatgacgt gcgccatatg ctgaatgcat taacagcgtt
     4201 aggggtaagc tatacgcttt cagccgatcg tacgcgttgc gaaattatcg gtaacggcgg
     4261 tccattacac gcagaaggtg ccctggagtt gttcctcggt aacgccggaa cggcaatgcg
     4321 tccgctggcg gcagctcttt gtctgggtag caatgatatt gtgctgaccg gtgagccgcg
     4381 tatgaaagaa cgcccgattg gtcatctggt ggatgcgctg cgcctgggcg gggcgaagat
     4441 cacttacctg gaacaagaaa attatccgcc gttgcgttta cagggcggct ttactggcgg
     4501 caacgttgac gttgatggct ccgtttccag ccaattcctc accgcactgt taatgactgc
     4561 gcctcttgcg ccggaagata cggtgattcg tattaaaggc gatctggttt ctaaacctta
     4621 tatcgacatc acactcaatc tgatgaagac gtttggtgtt gaaattgaaa atcagcacta
     4681 tcaacaattt gtcgtaaaag gcgggcagtc ttatcagtct ccgggtactt atttggtcga
     4741 aggcgatgca tcttcggctt cttactttct ggcagcagca gcaatcaaag gcggcactgt
     4801 aaaagtgacc ggtattggac gtaacagtat gcagggtgat attcgctttg ctgatgtgct
     4861 ggaaaaaatg ggcgcgacca tttgctgggg cgatgattat atttcctgca cgcgtggtga
     4921 actgaacgct attgatatgg atatgaacca tattcctgat gcggcgatga ccattgccac
     4981 ggcggcgtta tttgcaaaag gcaccaccac gctgcgcaat atctataact ggcgtgttaa
     5041 agagaccgat cgcctgtttg cgatggcaac agaactgcgt aaagtcggcg cggaagtgga
     5101 agaggggcac gattacattc gtatcactcc tccggaaaaa ctgaactttg ccgagatcgc
     5161 gacatacaat gatcaccgga tggcgatgtg tttctcgctg gtggcgttgt cagatacacc
     5221 agtgacgatt cttgatccca aatgcacggc caaaacattt ccggattatt tcgagcagct
     5281 ggcgcggatt agccaggcag cctgaatgaa caacgggcga taaatagcca aatctttctt
     5341 tatcaaaacg tcggcacatt gtcggcgttt tttttcggac cttgtgagtc attttgatta
     5401 atggtagcgt cgcttgtcaa tgtaagttgt tgatacataa tatttatata tgattaatca
     5461 acggatgatt cacatgaaga atactaaatt actgctggcg attgcgacct ctgcagcatt
     5521 actgacaggg tgtcaaaata cccacggtat tgataccaat atggctatca gctccggttt
     5581 aaatgcctat aaagcagcaa cattaagcga tgccgatgca aaagcgattg ccaatcaggg
     5641 ctgtgccgaa atggacagcg gcaatcaagt cgcaagtaaa tccagcaagt acggtaaacg
     5701 tctggcaaaa atcgccaaag cattgggtaa caatattaat ggcacgctgg tcaactataa
     5761 ggtttatatg accagcgacg tcaacgcatg ggcgatggcg aacggctgtg tccgtgtcta
     5821 cagtggcctg atggacatga tgaatgacaa cgaaattgaa ggtgttctgg gccatgaact
     5881 gggccacgtc gcgttgggtc actcgctggc tgaaatgaaa gcttcttatg cgatcgttgc
     5941 cgcacgcgat gccatttcag ctaccagcgg agtggcttcc cagctttccc gctcacaatt
     6001 gggtgatatc gcagaaggcg ctattaatgc taaatactcc cgtgataaag agtccgaagc
     6061 agatgatttc tcctttgatc tgttgaagaa acgtggcatc agcacccagg ggctggttgg
     6121 cagctttgaa aaactggcta gtctggatgg cggtcgcacc cagtccatgt ttgactctca
     6181 cccaccatca acagagcgtg cgcaacacat ccgtgatcgt atcgcctctg gtaagtaaat
     6241 cattgtcatc tttcgggctg gtcttctgcc agcccgctat aattgcgcaa taaatcccca
     6301 tctgaataca gacaaaactg gtttttgcac acaacgttaa cgatttgtgg cgtcggcgcg
     6361 tataatgcgc gcggttatgt taacggtacg cctgttttaa ggagataaag atgacggcaa
     6421 ttgccccggt tattaccatt gatggcccaa gcggtgcagg gaaaggcacc ttgtgtaagg
     6481 ctatggcgga agcattgcaa tggcatctgc tggattcggg tgcaatttat cgcgtactgg
     6541 cattggcggc attacatcac catgttgatg ttgcgtcaga agatgcgctg gtaccgctgg
     6601 catcccatct ggatgtacgt tttgtgtcaa ccaatggcaa tctggaagtg atcctcgaag
     6661 gggaagatgt cagcggcgaa attcgtactc aggaagtggc gaatgcagct tcacaagtcg
     6721 cggcattccc acgcgttcgt gaagcattat tgcgtcgcca acgcgcgttt cgcgaattac
     6781 caggcctgat tgccgatggc cgcgacatgg gaacggtggt attccctgat gcgccagtga
     6841 aaattttcct tgacgcctcc tcggaagaac gagcgcatcg ccgcatgcta cagttgcagg
     6901 agaagggctt tagtgttaac tttgagcgcc ttttggccga gatcaaagaa cgcgacgacc
     6961 gcgatcgtaa ccgagcggta gcgccactgg ttccggcagc cgatgcttta gtgttggatt
     7021 ccaccacctt aagcattgag caagtgattg aaaaagcgct acaatacgcg cgccagaaat
     7081 tggctctcgc ataagcgacc gaatttgcag tacccccgtt gcaatggaat gacagcgggt
     7141 atgttaaaca accccatccg gcatggagcc aggtggacgt taaatataaa cctgaagatt
     7201 aaacatgact gaatcttttg ctcaactctt tgaagagtcc ttaaaagaaa tcgaaacccg
     7261 cccgggttct atcgttcgtg gcgttgttgt tgctatcgac aaagacgtag tactggttga
     7321 cgctggtctg aaatctgagt ccgccatccc ggctgagcag ttcaaaaacg cccagggcga
     7381 gctggaaatc caggtaggtg acgaagttga cgttgctctg gacgcagtag aagacggctt
     7441 cggtgaaact ctgctgtccc gtgagaaagc taaacgtcac gaagcctgga tcacgctgga
     7501 aaaagcttac gaagatgctg aaactgttac cggtgttatc aacggcaaag ttaagggcgg
     7561 cttcactgtt gagctgaacg gtattcgtgc gttcctgcca ggttctctgg tagacgttcg
     7621 tccggtgcgt gacactctgc acctggaagg caaagagctt gaattcaaag taatcaagct
     7681 ggatcagaag cgcaacaacg ttgttgtttc tcgtcgtgcc gttatcgaat ccgaaaacag
     7741 cgcagagcgc gatcagctgc tggaaaacct gcaggaaggc atggaagtta aaggtatcgt
     7801 taagaacctc actgactacg gtgcattcgt tgatctgggc ggcgttgacg gcctgctgca
     7861 catcactgac atggcctgga aacgcgttaa gcatccgagc gaaatcgtca acgtgggcga
     7921 cgaaatcact gttaaagtgc tgaagttcga ccgcgaacgt acccgtgtat ctctgggcct
     7981 gaaacagctg ggcgaagatc cgtgggtagc tatcgctaaa cgttatccgg aaggtaccaa
     8041 actgactggt cgcgtgacca acctgaccga ctacggctgc ttcgttgaaa tcgaagaagg
     8101 cgttgaaggc ctggtacacg tttccgaaat ggattggacc aacaaaaaca tccacccgtc
     8161 caaagttgtt aacgttggcg atgtagtgga agttatggtt ctggatatcg acgaagaacg
     8221 tcgtcgtatc tccctgggtc tgaaacagtg caaagctaac ccgtggcagc agttcgcgga
     8281 aacccacaac aagggcgacc gtgttgaagg taaaatcaag tctatcactg acttcggtat
     8341 cttcatcggc ctggacggcg gcatcgacgg cctggttcac ctgtctgaca tctcctggaa
     8401 cgttgcaggc gaagaagcag ttcgtgaata caaaaaaggc gacgaaatcg ctgcagttgt
     8461 tctgcaggtt gacgcagaac gtgaacgtat ctccctgggc gttaaacagc tcgcagaaga
     8521 tccgttcaac aactgggttg ctctgaacaa gaaaggcgct atcgtaaccg gtaaagtaac
     8581 tgcagttgac gctaaaggcg caaccgtaga actggctgat ggcgttgaag gttacctgcg
     8641 tgcttctgaa gcatcccgtg accgcgttga agacgctacc ctggttctga gcgttggcga
     8701 cgaagttgaa gctaaattca ccggcgttga tcgtaaaaac cgcgcaatca gcctgtctgt
     8761 tcgtgcgaaa gacgaagctg acgagaaaga tgcaatcgca actgttaaca aacaggaaga
     8821 tgcaaacttc tccaacaacg caatggctga agctttcaaa gcagctaaag gcgagtaatt
     8881 ctctgactct tcgggatttt tattccgaag tttgttgagt ttacttgaca gattgcaggt
     8941 ttcgtcctgt aatcaagcac taagggcggc tacggccgcc cttaatcaat gcagcaacag
     9001 cagccgctta atttgccttt aaggaaccgg aggaatcatg accaagtcag aattgataga
     9061 aagacttgcc acccagcaat cgcacattcc cgccaagacg gttgaagatg cagtaaaaga
     9121 gatgctggag catatggcct cgactcttgc gcagggcgag cgtattgaaa tccgcggttt
     9181 cggcagtttc tctttgcact accgcgcacc acgtaccgga cgtaatccga agactggcga
     9241 taaagtagaa ctggaaggaa aatacgttcc tcactttaaa cctggtaaag aactgcgcga
     9301 tcgcgccaat atttacggtt aagtttttac tcaaacttga acgcgagaaa agcacctgtc
     9361 gggtgctttt ttcatttctc taatcaggaa ctggaagctg cctcgcagag ttttgagcag
     9421 ttttcaccct ttcgttaaat tcttctgaat gtgcctcggg gaacgcaaaa ttcccaccag
     9481 acaaccgctc aacaaagttg cacactttcc ataaacaggg aggggtgcat gaaaataacg
     9541 acagtcggcg tatgcataat ttgcggaatt tttccgttgc tgattttgcc ccaattgcct
     9601 gggacattaa cccttgcgtt tctgactctc ttcgcctgcg tactggcatt tatccctgtt
     9661 aaaaccgtcc gttatatcgc gctgacgttg ctgtttttcg tttggggcat attatcagca
     9721 aagcaaattt tgtgggcagg agaaacctta actggcgcga cgcaggatgc aattgttgag
     9781 atcactgcaa ctgacggcat gaccactcat tacggtcaaa ttactcatct acaaggtcga
     9841 cgtatattcc ctgcgccagg ccttgtgctg tatggcgaat atcttccgca agcggtttgt
     9901 gctggacaac aatggtcaat gaaactcaaa gttcgtgcag ttcatggcca acttaatgat
     9961 ggcggctttg atagccagcg ttatgccatt gcccagcatc agccgctcac cggccgcttt
    10021 ctgcaggcaa gtgtcattga accgaattgt agcctgcgtg cacagtatct ggcgtcacta
    10081 caaacaacgc tgcaacccta tatgtggaat gcggttattc ttggtttagg tatgggggaa
    10141 cggttatccg tccccaaaga aatcaaaaat atcatgcgtg atactggaac ggcgcattta
    10201 atggcgatat cgggattgca catcgctttt gcggcgttgc tggctgccgg actcattcgc
    10261 ggtgggcaag tttatctgcc tgggcgctgg atccactggc aaatgccatt aattggtgga
    10321 atctgctgtg ctgcttttta tgcctggttg acgggaatgc aacctcctgc attgcgtacc
    10381 gtggtggcgc ttgctacgtg gggaatgctt aagttaagtg ggcgacagtg gagtggctgg
    10441 gatgtatgga tatgttgtct ggcggcaatt ttgctgatgg atcctgttgc cattctctcg
    10501 caaagtttat ggctctctgc cgctgcggtc gcggcactga ttttttggta ccagtggttt
    10561 ccctgtcctg agtggcaact gccgccggta ttgcgtgcag ttgtttccct cattcatttg
    10621 caactgggaa tcacactcct gcttatgcct gtgcaaatcg tcatatttca tggcattagt
    10681 ctgacctcgt ttattgcaaa tctattagca attcccttgg tgacatttat cacggttccg
    10741 ttgatcctcg ccgcgatggt tgtgcattta agcgggccgt taatcctgga gcaagggtta
    10801 tggtttcttg ccgaccggtc tttggcttta cttttctggg ggttaaagag tttgccagaa
    10861 gggtggatca acattgctga acgttggcaa tggctatcat tttccccatg gttcttactg
    10921 gtggtatggc gattaaacgc ctggcgaacg ttgccagcaa tgtgtgtggc tgtaggcttg
    10981 ctgatgtgct ggccgctgtg gcaaaaacct cgacctgacg agtggcaggt gtacatgctt
    11041 gatgtcgggc aagggctggc aatggtgata gccagaaacg gcaaagcgat tctctatgac
    11101 acaggactgg cctggcccga aggggatagt gggcaacaac tgattatccc ctggctccac
    11161 tggcataatc ttgaaccgga aggcgttatt ctgagtcatg aacatctgga tcaccgggga
    11221 gggctggact caatattgca cacatggccg atgttatgga tcagaagtcc gttaaactgg
    11281 gaacatcatc agccctgtgt gcgtggcgaa gcgtggcaat ggcaaggatt gcgtttcagc
    11341 gtgcactggc ctttacaagc tagcaacgat aaaggaaata accattcctg tgtggttaag
    11401 gttgatgacg ggacgaatag cattcttcta accggtgata ttgaagtccc cgctgaacaa
    11461 aagatgctaa gccgttactg gcagcaagtg cagacaacat tgcttcaggt acctcaccat
    11521 ggcagtaata cctcatcatc gttgccatta attcagcgag tgaatggaaa agtggcactc
    11581 gcatcggcat cgcgctataa cgcatggcga ttgccctcta ataaagttaa gcatcgctat
    11641 caacagcaag gatatcaatg gcttgatact ccacatcagg gtcaagtgac ggtcaatttt
    11701 tcagcgcaag gctggcggat tagcagcctc agagagcaaa ttttacctcg ttggtatcat
    11761 cagtggtttg gcgtgccagt ggataacggg tagaatatgc ggctatttca acaaatgctg
    11821 gttttttgaa tgcataacga caaagatctc tctacgtggc agacgttccg ccgactgtgg
    11881 ccaaccattg cgccttttaa agcgggtctg atcgtggcgg gcgtagcgtt aatcctcaac
    11941 gcagccagcg ataccttcat gttatcgctc cttaagccac ttcttgatga tggctttggt
    12001 aaaacagatc gctccgtgct ggtgtggatg ccgctggtgg tgatcgggct gatgatttta
    12061 cgtggtatca ccagctatgt ctccagctac tgtatctcct gggtatcagg aaaggtggta
    12121 atgaccatgc gtcgccgcct gtttggtcac atgatgggaa tgccggtttc attttttgac
    12181 aaacagtcaa cggggacgct gttgtcacgt atcacctacg attccgaaca ggttgcttct
    12241 tcttcttccg gcgcactgat aacggttgtg cgtgaaggtg cgtcaatcat cggcctgttc
    12301 atcatgatgt tctattacag ttggcaactg tcgatcattt tgattgtgct ggcaccgatt
    12361 gtttcgattg cgattcgcgt agtatcgaag cgttttcgca acatcagtaa aaacatgcag
    12421 aacaccatgg ggcaggtgac caccagcgcc gaacaaatgc tgaagggcca caaagaagta
    12481 ttgattttcg gtggtcagga agtggaaacg aaacgctttg ataaagtcag caaccgaatg
    12541 cgtcttcagg ggatgaaaat ggtttcagcc tcttccatct ctgatccgat cattcagctg
    12601 atcgcctctt tggcgctggc gtttgttctg tatgcggcga gcttcccaag tgtcatggat
    12661 agcctgactg ccggtacgat taccgttgtt ttctcttcaa tgattgcact gatgcgtccg
    12721 ctgaaatcac tgaccaacgt taacgcccag ttccagcgcg gtatggcggc ttgtcagacg
    12781 ctgtttacca ttctggacag tgagcaggag aaagacgaag gtaagcgcgt gatcgagcgt
    12841 gcgactggcg acgtggaatt ccgcaatgtc acctttactt atccgggacg tgacgtacct
    12901 gcattgcgta acatcaacct gaaaattccg gcagggaaga cggttgctct ggttggacgc
    12961 tctggttcag gtaaatcaac catcgccagc ctgatcactc gtttttacga tattgatgaa
    13021 ggcgaaatcc tgatggatgg tcacgatctg cgcgagtata ccctggcgtc gttacgtaac
    13081 caggttgctc tggtgtcgca gaatgtccat ctgtttaacg atacggttgc taacaacatt
    13141 gcttacgcac ggactgaaca gtacagccgt gagcaaattg aagaagcggc gcgtatggcc
    13201 tacgccatgg acttcatcaa taagatggat aacggtctcg atacagtgat tggtgaaaac
    13261 ggcgtgctgc tctctggcgg tcagcgtcag cgtattgcta tcgctcgagc cttgctgcgt
    13321 gatagcccga ttctgattct ggatgaagct acctcggctc tggataccga atccgaacgt
    13381 gcgattcagg cggcactgga tgagttgcag aaaaaccgta cctctctggt gattgcccac
    13441 cgcttgtcta ccattgaaaa ggcagacgaa atcgtggtcg tcgaggatgg tgtcattgtg
    13501 gaacgcggta cgcataacga tttgcttgag caccgcggcg tttacgcgca acttcacaaa
    13561 atgcagtttg gccaatgatc gaaaaaatct ggtctggtga atcccctttg tggcggctat
    13621 tgctgccact ctcctggttg tatggcctgg taagtggcgc gatccgtctt tgctataaac
    13681 taaaactgaa gcgcgcctgg cgtgcccccg taccggttgt cgtggttggt aatctcaccg
    13741 caggcggcaa cggaaaaacc ccggtcgttg tctggctggt ggaacagttg caacagcgcg
    13801 gtattcgcgt gggggtcgta tcgcggggat atggtggtaa ggctgaatct tatccgctgt
    13861 tattgtcggc agataccaca acagcacagg cgggtgatga acctgtgttg atttatcaac
    13921 gcactgatgc gcccgttgcg gtttctcccg ttcgttctga tgcggtaaaa gccattctgg
    13981 cgcaacaccc tgatgtgcag atcatcgtaa ccgacgacgg tttacagcat taccgtctgg
    14041 cgcgtgatgt ggaaattgtc gttattgatg gtgtgcgtcg ctttggcaat ggctggtggt
    14101 tgccggcggg gccaatgcgt gagcgagcgg ggcgcttaaa gtcggttgat gcggtaatcg
    14161 tcaacggcgg tgtccctcgc agcggtgaaa tccccatgca tctgctgccg ggtcaggcgg
    14221 tgaatttacg taccggtacg cgttgtgacg ttgctcagct tgaacatgta gtggcgatgg
    14281 cggggattgg gcatccgccg cgcttttttg ccacgctgaa gatgtgtggc gtacaaccgg
    14341 aaaaatgtgt accgctggcc gatcatcagt ctttgaacca tgcggatgtc agtgcgttgg
    14401 taagcgccgg gcaaacgctg gtaatgactg aaaaagatgc ggtgaaatgc cgggcctttg
    14461 cagaagaaaa ttggtggtat ttgcctgtag acgcacagct ttcaggtgat gaaccagcga
    14521 aactgcttac gcaactaacc tcgctggctt ctggcaacta gttacgccgc ggcagcgttc
    14581 gattgatgga gtcatgaatg tcgctgccgc acctctccct tgctgatgcg cgtaatcttc
    14641 accttgccgc acaaggcctg ttaaacaaac cccgccgtca agcgtcgttg gaggatattc
    14701 cggcaacgat ctcccgcatg tccttgctgc aaatcgatac catcaatatt gttgcccgta
    14761 gtccatatct ggtgcttttc agtcgtctgg gaaattatcc tgcccagtgg ctggatgagt
    14821 ctctggcgcg tggcgaatta atggaatact gggcgcatga agcctgcttt atgccgcgta
    14881 gcgactttcg tcttattcgc caccgcatgc tggcacctga aaaaatgggc tggaaataca
    14941 aagacgcctg gatgcaggaa catgaggcgg aaattgcaca gttaattcag catattcatg
    15001 ataaggggcc ggtacgttca gccgattttg agcatcctcg taaaggtgca agcggctggt
    15061 gggaatggaa gccgcataaa cggcatctgg aaggtttatt tactgccgga aaggtgatgg
    15121 tgattgaacg gcgcaacttc cagcgcgttt atgatttaac ccaccgtgtc atgcctgact
    15181 gggatgatga gcgcgatctc gtttcgcaaa cagaagcaga aatcatcatg ctggataaca
    15241 gtgcgcgtag cctgggaata ttccgcgaac agtggctggc agattactat cggctgaaac
    15301 gtccggcact ggcggcgtgg cgcgaagcga gggctgaaca gcagcaaatc attgctgtgc
    15361 atgttgaaaa attgggcaat ctttggctgc atgctgattt gctgccgcta ctcgagcgtg
    15421 cgctggccgg aaagctcact gcaacgcaca gcgcggtact ttcgcctttt gatcctgttg
    15481 tctgggatcg caaacgcgca gagcagcttt ttgattttag ctaccggctg gagtgctata
    15541 ccccagcgcc gaaacgccag tatggctatt ttgttctgcc attattacat cgtgggcaat
    15601 tagttgggcg aatggatgcc aaaatgcatc gccagacagg catccttgaa gttatctctc
    15661 tgtggttaca ggaaggcatt aaaccaacga caatgctgca aaaagggtta cgtcaggcga
    15721 ttactgattt cgcgagctgg cagcaggcaa cgcgggtgac attaggacgc tgcccgcaag
    15781 gtctctttac tgattgccgc actggctggg aaatagaccc cgtcgcataa atgattatga
    15841 taagatttat gcattcataa cccgatccat ctggaggaac tatggatcat cgtctgcttg
    15901 aaatcattgc ctgcccggtt tgcaacggaa aactttggta taaccaagaa aaacaagaac
    15961 ttatttgcaa actggacaac ctggctttcc cgctgcgtga tggcattcca gtgttgctgg
    16021 aaacggaagc ccgcgtgctg actgctgatg agagtaaatc atgagttttg tggtcattat
    16081 tcccgcgcgc tacgcgtcaa cgcgtctgcc cggtaaacca ttggttgata ttaatggcaa
    16141 acccatgatt gttcatgttc ttgaacgtgc tcgcgaatca ggtgccgatc gcatcatcgt
    16201 ggcaaccgat catgaggatg tcgcccgcgc cgttgaagcc gctggcggtg aagtatgtat
    16261 gacgcgcgcc gatcaccagt cagggacaga acgcctggcg gaagttgtcg aaaaatgcgc
    16321 attcagcgac gacacggtga tcgttaatgt gcagggtgat gaaccgatga tccctgcgac
    16381 aatcattcgt caggttgctg ataacctcgc tcagcgtcag gtgggtatgg cgactctggc
    16441 ggtgccaatc cacaatgcgg aagaagcgtt taacccgaat gcggtgaaag tggttctcga
    16501 cgctgaaggg tatgcactgt acttctctcg cgccaccatt ccttgggatc gtgatcgttt
    16561 tgcagaaggc cttgaaaccg ttggcgataa cttcctgcgt catcttggta tttatggcta
    16621 ccgtgcaggc tttatccgtc gttacgtcaa ctggcagcca agtccgttag aacacatcga
    16681 aatgttagag cagcttcgtg ttctgtggta cggcgaaaaa atccatgttg ctgttgctca
    16741 ggaagttcct ggcacaggtg tggatacccc tgaagatctt gagcgcgttc gcgctgaaat
    16801 gcgctaattt cacttcacga cacttcagcc aattttggga ggagtgtcgt accgttacga
    16861 ttttcctcaa tttttctttt caacaattga tctcattcag gtgacatctt ttatattggc
    16921 gctcattatg aaagcagtag cttttatgag ggtaatctga atggaacagc tgcgtgccga
    16981 attaagccat ttactgggcg aaaaactcag tcgtattgag tgcgtcaatg aaaaagcgga
    17041 tacggcgttg tgggctttgt atgacagcca gggaaaccca atgccgttaa tggcaagaag
    17101 ctttagtacg cccggaaaag cccgacaact ggcatggaaa accaccatgc tggcaagaag
    17161 tgggactgtc cgtatgccga ctatttatgg tgtgatgacg catgaagaac accccggccc
    17221 cgatgtcctg ctactggagc ggatgcgtgg tgtttcggtg gaggcaccag cccgaacacc
    17281 agaacgctgg gaacaactca aagaccaaat cgttgaagcc ttactggcct ggcaccgtca
    17341 ggacagtcgc ggttgcgtcg gcgcggtcga caatactcag gaaaatttct ggccctcatg
    17401 gtaccggcaa catgttgaag tgctatggac cacgctcaat cagttcaata acaccggtct
    17461 gacgatgcag gataagcgga tcctgtttcg cactcgcgaa tgtctcccgg cattatttga
    17521 aggctttaac gacaattgtg tgctgattca cggtaacttc tgtttacgca gcatgttgaa
    17581 agattcgcgc agcgatcagt tactggcgat ggtcgggccg ggactaatgc tttgggcacc
    17641 gcgagaatac gaactgttcc gactaatgga taattctctg gcggaagatt tgctctggag
    17701 ttacctgcaa cgcgcgccag tggcggagtc gttcatctgg cggcgttggt tgtatgtgtt
    17761 atgggatgaa gttgcgcaac tggttaatac cggacgattt agtcggcgca acttcgatct
    17821 ggcatcaaaa tcactcttgc cgtggctcgc ctgacgaacc ttttagccac tgccagatac
    17881 ggccaagcgt ttcatagcca acacgatcgc tatgcatcag ccagaccgga gaagggattg
    17941 cccgttccca cgggttaagc ggcgagtcga tggccaactg attcgccggg gctggtagcg
    18001 gatttaaccc ttcctgctga aaaaagatca tcgcccgcgg cagatgtgat gcggaggtca
    18061 ccagcaggaa aggggcgtca ccaatcgcct gtttcactgc cgcagcttct tcttcggtat
    18121 cttttggcaa atccagggtg ataatttgct cgcgcggcac gcccagcgat tgcgcaactc
    18181 tggcacctac ttccgctgta ctcaccgtat tggtttttgc tacgcctccc gtgaagatca
    18241 gttttgatcc cggattttcg cgccataagc gaataccttc attcaggcgt ggcagactgt
    18301 tattgattaa attagagctc ggtgcccact gcgggttcca ggtataacca cctccgagca
    18361 ccacgatata gtccactttt tgcgaattat tccatgtcgg ataggtgctt tcgatgggac
    18421 gcagcaggcg gtcggctacc ggttgcaaac tcaataacaa gagtgccagc cacccaatgc
    18481 taataaaaat cttcccggtt ttttgaaaac ggctaaacca cagcagcgcc aggccagcgc
    18541 caataattaa caacatcagc ggaagtggca gcaacatatt gccaatcact tttttcagtg
    18601 taaaaagcat cctttctggt tcctttttta accatatagc aagggatcgc cagcgatatt
    18661 acaccagacg ggttcattct cgccgtggct gtgacaaaat agcgtcttta tcagaaaacg
    18721 tcttagccaa ccggtggaga aagcaatgca ggatcgcaat tttgatgata ttgcggaaaa
    18781 gttttcccgt aacatttacg gcaccaccaa agggcagctt cgacaggcta ttctgtggca
    18841 ggatctcgat cacgtgctgg cggaaatggg cccgcaaaaa ctgcgtgtgc tggatgctgg
    18901 cggtggagaa gggcagaccg caatcaaaat ggccgagcgt gggcatcagg tcattttatg
    18961 cgatctttct gcgcagatga tcgaccgcgc aaaacaggcg gcagaagcaa aaggtgtgag
    19021 cgacaacatg caatttatac attgcgccgc tcaggatgtt gcttcgcatt tggaaacgcc
    19081 cgttgatctg atattgttcc atgcggtgct cgagtgggtg gccgatcccc gcagtgtatt
    19141 gcagaccctg tggtcagtgt tgcgtccagg cggcgtgttg tcgttaatgt tctacaatgc
    19201 gcatggtttg ttgatgcata acatggtcgc cgggaatttt gattacgtgc aggcgggaat
    19261 gccgaaaaag aaaaaacgga cgctttcgcc agattatcca cgcgacccgg cgcaggttta
    19321 tctgtggctg gaagaagctg gttggcaaat tatgggtaag acaggcgttc gcgtgtttca
    19381 tgattatctg cgcgagaagc accagcagcg cgactgctat gaagcattac ttgaattaga
    19441 aacgcgttat tgccgtcagg aaccgtatat taccctgggg cgttatattc atgtcaccgc
    19501 gcgcaaaccg cagagcaagg ataaagtatg agtgaatttt cccagacagt ccccgaactg
    19561 gttgcctggg ccagaaaaaa tgacttctcc atctcgctgc cggtagaccg actctctttt
    19621 ctgctggcgg ttgccacgct gaacggcgag cgtctggatg gtgagatgag tgaaggcgag
    19681 ctggtggatg cattccgcca tgtgagtgat gcgtttgagc aaaccagcga aaccatcggc
    19741 gtgcgcgcca acaacgcgat caacgacatg gtgcgtcaac gtctgctgaa ccgctttacc
    19801 agcgagcagg cggaagggaa cgcaatttac cgtctgacgc cgctcggcat cggcattact
    19861 gactactaca tccgtcagcg cgagttttct acgctgcgtc tttctatgca gttgtcgatt
    19921 gtggcgggtg agctcaaacg cgcagcagat gccgccgaag agggcggtga tgaatttcac
    19981 tggcaccgta atgtctatgc gccactgaaa tattcggtag cagaaatttt cgacagtatc
    20041 gacctgacgc aacgtctgat ggacgaacag cagcagcagg tgaaggacga tatcgcccag
    20101 ttgctgaaca aagactggcg ggcggcgatt tccagctgtg aattgttgct ttcggaaact
    20161 tccggaacgc tgcgtgaatt gcaggatacg ctggaagcgg caggcgacaa attgcaggct
    20221 aatctgttgc gcattcagga tgcgacgatg acccatgacg atctgcattt cgtcgatcgt
    20281 ctggtgttcg atctgcagag caaactcgat cgtattatca gttggggcca gcaatccatc
    20341 gacttgtgga ttggctacga ccgccacgta cacaaattta ttcgtaccgc gatcgatatg
    20401 gataaaaacc gcgtctttgc tcagcggtta cgtcagtcgg tacaaaccta ttttgatgag
    20461 ccgtgggcgc taacttatgc caatgccgat cgtctgctgg atatgcgtga cgaagagatg
    20521 gcactgcgcg atgaagaagt gactggggaa cttcctgagg atctggaata cgaagagttt
    20581 aacgagatcc gcgaacagct ggcggcgatc atcgaagaac aacttgccgt gtacaaaacc
    20641 agacaagtgc cgctggatct tggtctggtg gtacgcgaat atctgtcaca gtatccgcgt
    20701 gcacgtcact ttgacgttgc gcgcattgtt attgatcagg cggtacgtct tggcgtagcg
    20761 caagcagatt tcaccggact gccagcgaaa tggcagccga ttaatgatta cggagccaag
    20821 gtacaggcgc atgtcatcga caaatattga acaagtgatg ccggttaagc tggcgcaggc
    20881 gctggcgaat ccgttatttc cggcgctgga cagcgcctta cgttcaggcc gccatattgg
    20941 cctcgacgaa ctggataatc atgcattcct gatggatttt caggaatatc tggaagagtt
    21001 ttacgcgcgt tataacgttg agcttattcg cgcaccagaa gggttcttct atttacgccc
    21061 acgttccacc acgctgatcc ctcgttccgt cttgtcggaa ctggatatga tggtcgggaa
    21121 aatcctctgt tatctctatc tcagcccgga acggctggcg aatgagggga ttttcaccca
    21181 gcaggaactg tacgacgaac tgctcaccct ggccgatgaa gcaaaactgc tgaaactggt
    21241 gaacaaccgt tcaaccggtt cagacgttga ccgtcagaag ttgcaggaga aagtacgttc
    21301 ttcgctcaac cgtctgcgtc gtttaggcat ggtgtggttt atgggccacg acagcagcaa
    21361 gtttcgcatt accgaatcgg tgttccgctt cggagccgat gtgcgtgctg gcgacgatcc
    21421 ccgtgaagca cagcgtcgcc tgattcgtga tggcgaagca atgccgattg aaaatcatct
    21481 gcaactcaac gatgaaaccg aagagaatca gccagatagc ggagaggaag aataatgatt
    21541 gaacgcggta aatttcgctc actgacgctg attaactgga acggcttttt tgcccgaact
    21601 tttgaccttg acgagctggt cacgacgctt tctggcggta acggggcggg taaatccacc
    21661 accatggcgg cgttcgttac ggcgctgatc cccgacctga ccctgctgca tttccgtaac
    21721 actacggaag ccggggccac cagcggttcg cgcgataaag gtctgcacgg taagctgaaa
    21781 gcgggtgtct gttattcgat gctcgacacc attaactcgc gccaccagcg cgtggtggtc
    21841 ggtgtgcgtc tgcaacaggt tgccggacgc gatcgtaaag tggatatcaa gccgtttgcc
    21901 attcagggac tgccgatgtc ggtgcagccg acacagctgg tgaccgaaac cctgaacgaa
    21961 cgccaggcgc gcgtgctgcc gcttaacgag ctgaaagaca agctcgaggc gatggaaggc
    22021 gtgcagttta aacagttcaa ctccattact gattaccact cgctgatgtt cgatctgggc
    22081 atcatcgcgc gtcgtctgcg ctccgcatct gaccgtagca aattctatcg tctgatcgaa
    22141 gcttcgctgt atggcgggat ctccagtgcc attacccgtt ctctgcgcga ctacctgttg
    22201 ccggaaaaca gcggcgtgcg taaagcgttc caggacatgg aagcggcgct gcgtgaaaac
    22261 cgtatgacgc tggaagcgat tcgtgtcacc cagtcggacc gtgacctgtt taagcatctg
    22321 atcagcgaag ctaccaacta cgtggcggcg gactacatgc gtcacgccaa cgagcgccgt
    22381 gtccatctcg acaaagccct ggagtttcgt cgcgagttac atacttcgcg tcagcaactg
    22441 gcggctgagc agtacaaaca cgtcgatatg gcgcgtgagc tggcagagca caacggtgcc
    22501 gaaggcgatc tggaagcgga ttatcaggcg gccagcgatc acctgaacct ggtgcaaacc
    22561 gcactgcgtc agcaggagaa gatcgaacgc tacgaagcgg atctcgatga gctgcagatc
    22621 cgtctggaag agcaaaacga agtggtggca gaagccatcg aacgccagga agagaacgag
    22681 gctcgcgcgg aagctgccga actggaagtg gacgagctga aaagccagct tgctgactac
    22741 cagcaggcgc tggacgtcca gcaaacgcgc gcgatccagt ataaccaggc gattgctgcg
    22801 cttaatcgcg ccaaagaact gtgccatctg ccggacttaa ccgccgacag cgccgccgaa
    22861 tggctggaaa ccttccaggc gaaagagctg gaagcgactg aaaaaatgct ctctcttgag
    22921 cagaaaatga gcatggcgca aaccgcgcac agccagtttg agcaggctta tcagctggtg
    22981 gtggcaatca acggcccgct ggcgcgtaac gaggcgtggg atgtcgctcg cgaactattg
    23041 cgcgaagggg tcgatcagcg tcacctggca gagcaggttc agccgttgcg gatgcgctta
    23101 agcgaactgg aacagcgtct gcgcgaacag caagaagctg agcgtctgct ggcagatttc
    23161 tgcaaacgtc agggcaagaa ttttgacatt gacgagctgg aagctctgca tcaggagctg
    23221 gaagcgcgca ttgcctctct ttccgatagc gtgtctaacg cccgtgaaga gcgcatggca
    23281 ctgcgccagg aacaggaaca gctgcagtct cgcattcaga gtttgatgca gcgtgcgccg
    23341 gtttggctgg cagcgcaaaa cagtctcaac cagttgagcg aacagtgcgg cgaagagttt
    23401 acctccagcc aggacgtcac cgaatatctg caacagttgc tggagcgtga gcgagaggcg
    23461 attgttgaac gcgatgaagt gggcgcgcgc aaaaacgccg tcgatgaaga gatcgaacgt
    23521 ttaagccagc ctggcggctc tgaagatcag cgtctgaacg cgctggcgga gcgttttggt
    23581 ggtgtgctgc tgtcagaaat ttatgacgac gttagcctgg aagatgcgcc gtacttctca
    23641 gcgctgtatg gcccgtcacg ccacgccatc gtggtgccag atctgtcaca ggtaactgaa
    23701 cacctggaag gcttgaccga ttgcccggaa gatctctatc tgatcgaagg agatccgcag
    23761 tcattcgatg acagcgtgtt cagcgttgat gagctggaaa aagcggtagt ggtgaaaatc
    23821 gccgatcgtc agtggcgtta ttcacgtttc ccggaagtgc cgctgtttgg tcgtgctgcg
    23881 cgtgaaagcc gtattgaaag cctccatgcc gagcgtgaag tgctttccga acgcttcgcc
    23941 acgctctcct ttgatgtaca gaaaactcag cgtctgcatc aggcgttcag ccgctttatc
    24001 ggcagtcatc tggcggttgc gtttgagtct gacccggaag cagaaatccg tcaactgaac
    24061 agccgtcgcg tcgaactgga gcgggcgttg agtaatcatg aaaatgataa ccagcagcag
    24121 cgtattcagt ttgagcaggc gaaagaaggc gttacggcgc tgaaccgcat tctgccgcgt
    24181 ctcaacctgt tggctgatga cagcctggcg gatcgcgtcg atgaaatccg cgaacgtctg
    24241 gatgaagccc aggaagccgc gcgttttgtt cagcagtttg gcaatcaact ggcgaaactg
    24301 gaaccgatcg tttcggtatt gcagagcgac ccggaacagt tcgaacagct aaaagaagat
    24361 tacgcgtact ctcagcagat gcagcgcgat gcccgtcagc aggcgtttgc cctgacggaa
    24421 gtggtgcagc gtcgtgcgca ctttagctat tctgactcgg cagaaatgct gagcggtaat
    24481 agcgatctca acgaaaagct gcgtgaacgt ctggaacagg cggaagcgga gcgtactcgc
    24541 gctcgtgaag cgttgcgtgg tcacgcagcg cagttgagtc agtacaacca ggtgctggct
    24601 tcgctgaaaa gttcttacga caccaaaaaa gagctactca acgatctgca acgtgaattg
    24661 caggatatcg gcgtgcgtgc tgatagcggg gcagaagagc gggcgcgtat tcgccgtgac
    24721 gagctgcatg cgcaactgag caataaccgt tcacgccgca atcaactgga aaaagcgctt
    24781 accttctgcg aagcggagat ggacaacctg acccgcaaac tgcgcaagct ggagcgggat
    24841 tactttgaga tgcgcgagca ggtagtgacc gccaaagcgg gctggtgtgc ggtgatgcgc
    24901 atggtgaaag ataacggcgt tgagcgccgc ttacaccgtc gtgagctggc ttatctctcc
    24961 gctgatgatt tgcgctctat gtcggataag gcattgggtg cgctgcgtct ggcggtggcg
    25021 gataacgaac atctgcgcga cgtgctgcgc atgtcggaag atccgaaacg tccggagcgt
    25081 aaaattcagt tcttcgtggc ggtttatcag catctgcgtg aacgtattcg tcaggatatt
    25141 attcgtaccg atgatccggt ggaagctatc gaacagatgg agatcgaact tagccgtctg
    25201 accgaagaat taacctcccg tgaacagaaa ctggcgatca gttcccgcag cgtggcgaac
    25261 atcattcgca aaaccattca gcgcgagcag aaccgtatcc gtatgctcaa ccaggggttg
    25321 cagaacgtat cgtttggtca ggtgaacagc gtgcgcctca acgtgaacgt gcgtgaaacg
    25381 cacgccatgc tgctggatgt gctctctgaa cagcacgagc agcatcagga tctgtttaac
    25441 agcaaccgtc tgaccttctc ggaagcgttg gcgaaattgt atcagcgtct taatccgcag
    25501 attgatatgg gacagcgcac gccgcagacc attggcgaag aactgctgga ttaccgcaac
    25561 tatctggaaa tggaagttga ggttaaccgt ggttccgatg gttggttgcg cgcagagtct
    25621 ggtgcattgt cgaccggtga ggcgattggt accggtatgt cgattctggt gatggtggta
    25681 caaagctggg aagatgaatc tcgccgcctg cgcggtaaag atatctctcc ttgccgcctg
    25741 ctgttcctcg atgaagcagc gcgactggat gctcgttcta tcgccacgct gtttgaattg
    25801 tgtgagcgtt tgcaaatgca gctcatcatc gcagcgccgg aaaatatcag cccggagaaa
    25861 ggcaccacct ataaactggt gcgtaaagtc ttccagaata ccgaacacgt tcacgtcgtc
    25921 ggcctgcgag gatttgcgcc gcaactccct gaaacgcttc caggaagtga cgaagcgcct
    25981 tctcaggcga gttaaaatta aggcggcagc aatgccgcct tttctttttc cgaaaactcc
    26041 gtttccgcac taaaaaagtg gcacattacg gcgcgctttt ctttaaactt ctttacatta
    26101 ggttatgtaa aaacgtatcg gcgtttatat actgaagata agcctgatga gtaacaggct
    26161 tgctcgtcat actttcgtga gtattggcgt tgtacaggca agtcgtaaaa taacagcctg
    26221 gctattcaga gtatgataaa aacagggggc aagggatgtt gcttaatatg atgtgtggtc
    26281 gtcggctgtc ggcaatcagt ttgtgcctgg ccgtaacatt cgctccactg ttcaatgcgc
    26341 aggccgatga gcctgaagta atccctggcg acagcccggt ggctgtcagt gaacagggcg
    26401 aggcactgcc gcaggcgcaa gccacggcaa taatggcggg gatccagcca ttgcctgaag
    26461 gtgcggcaga aaaagcccgc acgcaaatcg aatctcaatt acccgcaggt tacaagccgg
    26521 tttatcttaa ccagcttcaa ctgttgtatg ccgcacgcga tatgcaaccc atgtgggaaa
    26581 accgtgatgc tgttaaagcc ttccagcaac agctggcaga ggtggcgatt gccggtttcc
    26641 agccgcagtt taataaatgg gtagagttac tgaccgatcc tggtgttaac gggatggcac
    26701 gcgacgtagt gctctctgat gcgatgatgg gttatctcca tttcattgca aatattccgg
    26761 tcaaaggcac tcgctggcta tatagcagta aaccttatgc acttgcaacg ccgccgctct
    26821 cggtgattaa ccaatggcag ctggcgctgg ataaaggtca attgcctacg tttgttgcag
    26881 gactggcacc gcagcatccg caatatgcgg cgatgcatga atcgttactg gccttactca
    26941 gtgacaccaa accgtggccc caactgaccg gcaaagcaac gttgcgccca gggcagtgga
    27001 gtaacgacgt accggcgttg cgcgaaatat tgcaacgcac aggcatgttg gacggggggc
    27061 cgaaaattac tctacctggc gatgacacgc caactgacgc ggtagtcagc ccatccgctg
    27121 ttactgttga aacagcagaa actaagccga tggacaagca aacgacgtct cgtagtaaac
    27181 ctgcgcctgc cgttcgtgcc gcctacgata atgaactggt ggaagccgtt aaacgttttc
    27241 aggcatggca aggattgggg gcagatggtg ctattggccc ggcaacacgt gactggttaa
    27301 acgtaacgcc cgcccagcgt gctggcgtgt tggctctcaa catccagcga ttgcgcttgc
    27361 tgccaacaga gctttctacc gggatcatgg ttaacattcc ggcctattcg ctggtctact
    27421 atcagaacgg caatcaggtg ctggattcgc gagtcattgt cggtcgcccc gatcgcaaaa
    27481 cgccgatgat gagcagtgcc cttaacaacg tagtggtaaa cccgccgtgg aacgtacctc
    27541 caactctggc acgcaaagat attctgccaa aagtgcgcaa cgatccggga tatctcgaaa
    27601 gccatggcta tacggtgatg cgcggctgga acagcagaga agcgattgac ccatggcagg
    27661 ttgactggtc tacaatcacg gcctcgaatt taccgttccg cttccagcag gctccaggcc
    27721 cacggaactc gctggggcgc tataaattca atatgccgag ttcagaggcc atttatttgc
    27781 atgacacgcc gaaccacaat ctgttcaagc gtgatacacg cgcattgagc tcaggctgtg
    27841 tacgagtgaa taaagcttcc gatctggcga atatgctgtt gcaggatgca ggctggaatg
    27901 acaaacgtat ttctgatgcg ctgaagcagg gtgatacacg ttacgtcaat attcggcagt
    27961 cgattccggt gaatctctac tacctgacgg cctttgttgg tgcagatggt cgtacccagt
    28021 atcgtacaga tatttacaat tatgatctgc ctgcgcgatc cagctcgcaa atcgtatcga
    28081 aagcggaaca attaatcagg taaatgaagt agttcgggga aatcagttgt cgtaataatt
    28141 agcatgattg ggggcgattc tctgcagccc ccgtcactgc tggggttgag tcatcttgac
    28201 gtctgcttta cgggcggtta aggtgcctct tgtgcgccag aagtgcatat aaacgataac
    28261 attgacctgt agacttgatt atcatggaca aattcgacgc taatcgccgc aaattgctgg
    28321 cgcttggtgg cgttgcactc ggtgccgcca tcctgccgac ccctgcgttt gcaacactct
    28381 ctaccccacg cccgcgcatt ttgacactca ataatcttca taccggagag tcaatcaaag
    28441 cggagttttt cgatggcaga ggctatattc aggaagaatt ggcaaaactt aaccattttt
    28501 tccgcgatta ccgcgcgaac aaaataaagt ccatcgaccc aggattattc gaccagttgt
    28561 atcgcctgca agggttgtta ggcacgcgca aaccggtgca actcatttcc ggttatcgtt
    28621 ctattgatac caacaatgaa ctacgcgccc gcagccgtgg agtagcgaag aaaagctatc
    28681 acactaaagg ccaggcgatg gatttccata ttgaaggtat cgcgttaagc aatattcgca
    28741 aagccgcgtt atctatgcgc gcaggtggtg taggatatta tccacgtagt aactttgtgc
    28801 atattgatac cgggccagca cggcactggt agtaattgct taacgaaaca ggggcagtat
    28861 gaactatcgt attattccgg tcaccgcatt ctcccagaac tgttcattaa tctggtgtga
    28921 acaaacccgt ctggccgcac tggtcgatcc tggcggcgat gcggaaaaaa tcaaacagga
    28981 agttgatgac agcggcctga cactgataca gatcctgctg acgcatggtc atctggacca
    29041 cgttggcgca gcggcggaac tggcgcaaca ttacggcgtg ccggtttttg gcccggaaaa
    29101 agaagatgag ttctggctgc aaggcttgcc tgcgcaaagt cgtatgtttg gtctggaaga
    29161 gtgccagccg ctgacgccag atcgttggct gaacgaaggc gataccatca gcatagggaa
    29221 tgtgacttta caggtgttac attgccctgg gcatacgccg ggtcatgtcg tgttttttga
    29281 tgatcgggca aagctgctga tttctggcga tgttattttc aaaggcggag tagggcgcag
    29341 tgacttcccg cgtggcgatc ataatcaact gatttcttca atcaaagata aattgctgcc
    29401 actgggggat gacgtgacat ttattccggg tcacggacca ttatccacac ttggttatga
    29461 acgcctgcat aatcccttcc tgcaagacga aatgcccgtc tggtaaggca cataaaaaag
    29521 cccgctttta atgcgggcct ggatttctgg caaagtgcgc tttgtttatg ccggatgcgg
    29581 cacgagcgcc ttatccggcc tacaaaatcg tgcaaattca aaatattgca ggggacgcgt
    29641 aggcctgata agcgtagcgc atcaggcaat gttgcgtttg tcatcagtct cagcccgctt
    29701 ttcagcgggc ttcattgttt ttaatgctta cagcactgcc acaatcgctt cgcacagcgg
    29761 agccatgtta tctggtgtca tcccggccac atttacgcga ccagaagcaa ccgcatatac
    29821 gccaaactct tcgcgcagac gcagcacttg ttcttttgtc aggccactga aggagaacat
    29881 gccgttctgt ttgatgataa agctgaagtc gcggtttgcg cctttttcct gcaacgtatt
    29941 gacgaacaac tgacgcatac gctgaatacg ctggcgcata tcagtcagct cttgttccca
    30001 aatcgcacgt aacgcatcgt tgctcaggat ggtggcaaca acagaagcgc cgtgtgctgg
    30061 tgggttagag tagttagcgc gaatcgccgc tttcatttgg ctgaatgcgc gatcaacggt
    30121 ttcactgtcg gcagcaacca gagtacaagc gccaacacgc tcgttgtaca ggccaaagtt
    30181 tttagagtag gaactggcaa caatcagctc tttatgcata gccgcgaaag cgcgcagtcc
    30241 ttcagcatct tcttccagac cacgggcaaa accctggtaa gcgaagtcaa acagcggtaa
    30301 ccagcctttc tcaactgaga gttgtgccag tgtctgccat tgttccagcg tagggtcgat
    30361 accggttggg ttatggcagc agccatggaa cagcactacg tcgccagcct gagcttcgtt
    30421 caggctgtta atcagtgcat cgaagtcaag ggtgtggttt tctgcatcat aataagcgta
    30481 ttcacgaact tccagacctg cagagttaaa gacgctctta tggttcggcc agcttgggtt
    30541 gctcacccac actcgcttaa cgctggtatt ttttgccagg aaatcggcag ctacgcgtag
    30601 tgcgccagtg ccccccggag tctgtgccgt gcgagcacgt ttgtcattga tcagggcgct
    30661 acctttacca aacagcagtt cctgagtgca gcgaccaaat tcagggatgc cgtcaatgcc
    30721 gaggtaattt ttggtggttt cattttcgag cagatactgt tcagcctttt tcacgctggt
    30781 caataccggg gttttgcccg tctcatcttt atagacacca atcccgaggt taattttgcc
    30841 gggacgttca tcggcacgaa acagatcggc caggcccaga atcgggtcgg caggagcggc
    30901 ggtaatgttc tcaaacatga cgaggttcca ttatggttac agaagggaag tccgctatca
    30961 gggtaacggg agatttacaa aattccaact attactgatg aaaacgcagg ctgtttttgc
    31021 aagacgtgag attgctctgg aaggcataaa aaaaacagga ccaaagtcct gttttttcgg
    31081 catttaacaa agaggtgtgc tattagaact ggtaaacgat acccacagca acggtgtcgt
    31141 cagaacctac gcccagtttg ttgtcagaat cgatctggtt gatgatgtag tcaacatagg
    31201 tggacatgtt tttgttgaag tagtaggttg cgcccacttc aaagtagttc accagatcaa
    31261 catcaccgat accttctacg tctttcgctt tagatttggt gtaagcgatg gacggacgca
    31321 gaccgaaatc gaactggtat tgcgcaacta acagaacgtc ttgcgttttg ttggcgaagc
    31381 cgctggtgtt tgtaaattta ttagtgatcg gcgtagcgtt acgggtttca ccgtagttcg
    31441 ctgccaggta gatgttgttc gcgtcgtact tcagaccagt agcccactgt tcagcttttt
    31501 taccgttgcc aagaggttga gcttcttgca ggttggtacg gtcagctgca ccataagcac
    31561 caacgatacc aaagccttcg tattcgtagc tgatagaacc gccaacaccg tcgccgttag
    31621 aacggcgtgc agtgtcacgc tcgtttttac ccaggtactg aacagcgaag ttcaggccat
    31681 caaccagacc aaagaagttg gagttacgat aggtagcaac gccgccaaca cgaccaacga
    31741 agaagtcatc gctgtatgca gtatcaccac caaattctgg cagcatatcg gtgtaaccca
    31801 gtgcatcata aaccacaccg tagttacggc cgtaatcgaa agaaccaacg tcagcgtatt
    31861 taagacccgc gaatgccaga cgcgttttgt taccagtttg agcgtcagcg ccttcagagt
    31921 tgttaccctg gaagttatat tcccactgac cataaccggt cagatcggaa ttgatttgag
    31981 tttccccttt aaaaccaaga cgggcatagg tcatgtcgcc attgccaccg taactgtttt
    32041 caccgttacc cttggaaaaa taatgcagac caacagcttt accgtacaga tctactttgt
    32101 tgccatcttt gttatagatt tctgcagcgt ttgcagtacc tgctactaac agagcaggga
    32161 cgatcactgc cagaatattg cgcttcatca ttatttatta ccctcatggt tttttttatg
    32221 acacctgcca ctgccgtcaa taagttctgt caataaaaat ttacggaact attgatgaga
    32281 gtttggtgtc tttatgtgtc tgcaggcatc tttccattca aactaacgtt tcgctaccgt
    32341 gaaagtgcta caaagataaa gatttagttt caaaaagaaa aaatatgtaa ccaaaagtaa
    32401 aa
//
LOCUS       DAPGWB010000036        31939 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.036, whole genome shotgun sequence.
ACCESSION   DAPGWB010000036 DAPGWB010000000
VERSION     DAPGWB010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 31939)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31939)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31939
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.036"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            7..1377
                     /locus_tag="RHX79_001654"
     CDS             7..1377
                     /locus_tag="RHX79_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside-pentoside-hexuronide family
                     transporter"
                     /protein_id="HDV2196841.1"
                     /translation="MLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVG
                     TMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMN
                     GKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTV
                     LMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLR
                     DIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGS
                     ALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPI
                     QWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKA
                     QNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQQQFT
                     SQEVQN"
     gene            1387..3705
                     /gene="yicI"
                     /locus_tag="RHX79_001655"
     CDS             1387..3705
                     /gene="yicI"
                     /locus_tag="RHX79_001655"
                     /EC_number="3.2.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-xylosidase"
                     /protein_id="HDV2196842.1"
                     /translation="MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRER
                     TWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAE
                     FKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGE
                     TVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSF
                     EVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTS
                     FTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRR
                     LKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNP
                     DACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWN
                     VLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFW
                     SHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLK
                     CRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAG
                     DVQFYLPEGRWTHLWHNDELDGSRWHKQQHSFLSLPIYVRDNTLLALGNNDQRPDYVW
                     HEGTAFHLFNLQDGHEAVCEVPATDGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRN
                     VVKVNGLQDGSQAESEQGLVVKPQGNALTITL"
     gene            complement(3758..5467)
                     /locus_tag="RHX79_001656"
     CDS             complement(3758..5467)
                     /locus_tag="RHX79_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HDV2196843.1"
                     /translation="MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSD
                     YHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTIL
                     LENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVL
                     GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADG
                     SWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLS
                     LRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGG
                     MVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRN
                     LIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLA
                     LTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPKL
                     PLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTE
                     PVR"
     gene            complement(5588..6979)
                     /gene="xanP"
                     /locus_tag="RHX79_001657"
     CDS             complement(5588..6979)
                     /gene="xanP"
                     /locus_tag="RHX79_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine/proton symporter XanP"
                     /protein_id="HDV2196844.1"
                     /translation="MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLL
                     AMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQG
                     TSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPL
                     VSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNP
                     YLRVASLVIAMAAGYALAWFMGMLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLML
                     VFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCF
                     GQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIA
                     ASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPEWLKNLLSSGIAAGGIT
                     AIVLNLIFPPEKQ"
     gene            7259..8464
                     /gene="gltS"
                     /locus_tag="RHX79_001658"
     CDS             7259..8464
                     /gene="gltS"
                     /locus_tag="RHX79_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HDV2196845.1"
                     /translation="MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLL
                     VALALLVLKKSMGWEVNFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVV
                     GLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEV
                     AMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLI
                     ETIALIAICLTVGKIVAQLLAGTAFELPTFVCVLFVGVILSNGLSMMGFYRVFERAVS
                     VLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYD
                     AAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKL
                     YLMLPIFAG"
     gene            8467..9333
                     /locus_tag="RHX79_001659"
     CDS             8467..9333
                     /locus_tag="RHX79_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312555.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196846.1"
                     /translation="MKKRRKEPETLREHCRHIFGDEPPVLCVWETEFDYADAELKALA
                     AKEWQQISEWDLSAYYVLNLVYNEPMQIELFRYLFPLCLAQWHETVLAGGYGDHFEES
                     LMKALCRPYLWQEMMNASQRQQVRQFLLDTALQRMDNERGFNNVLCWLAVFNTLGGAA
                     PLIRSLWSRWWALDTPGKAVCAIQYAAHLIYPIEANPLWSQEWIGWGHPLGHKDGWSS
                     DNRAFLRQMLTPEMIVAGVQAAAEILRGEPEGAMAARIAQDAYEAMDILTIQIEDLLR
                     DLSCDESGHALE"
     gene            complement(9318..11399)
                     /gene="recG"
                     /locus_tag="RHX79_001660"
     CDS             complement(9318..11399)
                     /gene="recG"
                     /locus_tag="RHX79_001660"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDV2196847.1"
                     /translation="MKGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRY
                     EDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAA
                     MKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQ
                     ATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQH
                     PAQRRLILEELLAHNLSMLALRAGAQRFHAQPLSANDALKNKLLAALPFKQTGAQARV
                     VAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHA
                     NNFRNWFEPLGIEVGWLAGKQKGKARLSQQEAIASGQVQMIVGTHAIFQEQVQFNGLA
                     LVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
                     LPPGRTPVTTVAIPDTRRTDIIDRVRHACITEGRQAYWVCTLIEESELLEAQAAEATW
                     EELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMI
                     IENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQ
                     KDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIER
                     WMPETERYSNA"
     gene            complement(11405..12094)
                     /gene="trmH"
                     /locus_tag="RHX79_001661"
     CDS             complement(11405..12094)
                     /gene="trmH"
                     /locus_tag="RHX79_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(18)-2'-O)-methyltransferase
                     TrmH"
                     /protein_id="HDV2196848.1"
                     /translation="MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVG
                     VHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA
                     VDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE
                     AQRQRQNAGMYLRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEAD
                     ADWWATMQAAG"
     gene            complement(12101..14209)
                     /gene="spoT"
                     /locus_tag="RHX79_001662"
     CDS             complement(12101..14209)
                     /gene="spoT"
                     /locus_tag="RHX79_001662"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HDV2196849.1"
                     /translation="MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEP
                     YITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSK
                     LDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
                     ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILS
                     EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRV
                     LGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMG
                     VAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFT
                     PEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
                     ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENI
                     QRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGV
                     LITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQE
                     FITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLA
                     NIMRKIRVMPDVIKVTRNRN"
     gene            complement(14228..14503)
                     /gene="rpoZ"
                     /locus_tag="RHX79_001663"
     CDS             complement(14228..14503)
                     /gene="rpoZ"
                     /locus_tag="RHX79_001663"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013511051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDV2196850.1"
                     /translation="MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEEND
                     KTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR"
     gene            complement(14558..15181)
                     /gene="gmk"
                     /locus_tag="RHX79_001664"
     CDS             complement(14558..15181)
                     /gene="gmk"
                     /locus_tag="RHX79_001664"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000046969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDV2196851.1"
                     /translation="MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQP
                     RPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLD
                     IDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHY
                     AEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD"
     gene            15439..17121
                     /gene="ligB"
                     /locus_tag="RHX79_001665"
     CDS             15439..17121
                     /gene="ligB"
                     /locus_tag="RHX79_001665"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418104.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigB"
                     /protein_id="HDV2196852.1"
                     /translation="MKVWMAILISILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQW
                     DDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRK
                     MVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSL
                     ISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSL
                     GVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVT
                     DGVVVRGAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA
                     PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP
                     PENRFNSLTCYFASDVCQEQFISRLVWLGSKQVLGLDGIGEAGWRALHQTHRFEHIFS
                     WLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERS
                     WSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP"
     gene            complement(17118..17735)
                     /locus_tag="RHX79_001666"
     CDS             complement(17118..17735)
                     /locus_tag="RHX79_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312548.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDV2196853.1"
                     /translation="MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGG
                     SVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSI
                     IGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLY
                     IALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH"
     gene            complement(18026..18628)
                     /gene="dinD"
                     /locus_tag="RHX79_001667"
     CDS             complement(18026..18628)
                     /gene="dinD"
                     /locus_tag="RHX79_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418102.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HDV2196854.1"
                     /translation="MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLT
                     RAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVI
                     AAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQANTTHFD
                     VGSKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK"
     gene            complement(18849..19712)
                     /locus_tag="RHX79_001668"
     CDS             complement(18849..19712)
                     /locus_tag="RHX79_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HDV2196855.1"
                     /translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
                     LEPVVRERIRSRLTRGKVECTLRYEPDVSAQGELILNEKLAKQLVTAANWVKMQSDEG
                     EINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
                     EGVTAEVVKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEEL
                     DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLI
                     EQMREQIQNIE"
     gene            19839..20555
                     /gene="rph"
                     /locus_tag="RHX79_001669"
     CDS             19839..20555
                     /gene="rph"
                     /locus_tag="RHX79_001669"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006803115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HDV2196856.1"
                     /translation="MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
                     EGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
                     DLKALGEFTITLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVA
                     AVSVGIVNGEAICDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLL
                     ALARGGIESIVATQKAALAN"
     gene            20620..21261
                     /gene="pyrE"
                     /locus_tag="RHX79_001670"
     CDS             20620..21261
                     /gene="pyrE"
                     /locus_tag="RHX79_001670"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDV2196857.1"
                     /translation="MKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
                     DLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEA
                     KDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERG
                     RGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV"
     gene            complement(21298..21894)
                     /gene="slmA"
                     /locus_tag="RHX79_001671"
     CDS             complement(21298..21894)
                     /gene="slmA"
                     /locus_tag="RHX79_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HDV2196858.1"
                     /translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
                     EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERN
                     PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLAS
                     QILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
     gene            complement(22001..22459)
                     /gene="dut"
                     /locus_tag="RHX79_001672"
     CDS             complement(22001..22459)
                     /gene="dut"
                     /locus_tag="RHX79_001672"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDV2196859.1"
                     /translation="MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELA
                     PGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVW
                     NRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ"
     gene            complement(22437..23657)
                     /gene="coaBC"
                     /locus_tag="RHX79_001673"
     CDS             complement(22437..23657)
                     /gene="coaBC"
                     /locus_tag="RHX79_001673"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDV2196860.1"
                     /translation="MSLAGKKIVLGVSGGIAAYKIPELVRRLRDRGADVRVAMTEAAK
                     AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGM
                     ANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGD
                     IGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGF
                     AIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAA
                     VADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNV
                     EEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLL
                     LDEIVTRYDEKNRR"
     gene            23829..24497
                     /gene="radC"
                     /locus_tag="RHX79_001674"
     CDS             23829..24497
                     /gene="radC"
                     /locus_tag="RHX79_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HDV2196861.1"
                     /translation="MKNNAQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTL
                     AKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLL
                     SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAI
                     KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE
                     RGWI"
     gene            24714..24950
                     /gene="rpmB"
                     /locus_tag="RHX79_001675"
     CDS             24714..24950
                     /gene="rpmB"
                     /locus_tag="RHX79_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDV2196862.1"
                     /translation="MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEK
                     RFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY"
     gene            24971..25138
                     /gene="rpmG"
                     /locus_tag="RHX79_001676"
     CDS             24971..25138
                     /gene="rpmG"
                     /locus_tag="RHX79_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDV2196863.1"
                     /translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
                     QHVIYKEAKIK"
     gene            25236..26045
                     /gene="mutM"
                     /locus_tag="RHX79_001677"
     CDS             25236..26045
                     /gene="mutM"
                     /locus_tag="RHX79_001677"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HDV2196864.1"
                     /translation="MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRL
                     SDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKV
                     LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMD
                     NKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK
                     DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK"
     gene            complement(26084..26563)
                     /gene="coaD"
                     /locus_tag="RHX79_001678"
     CDS             complement(26084..26563)
                     /gene="coaD"
                     /locus_tag="RHX79_001678"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDV2196865.1"
                     /translation="MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKP
                     MFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQL
                     AHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA"
     gene            complement(26571..27848)
                     /gene="waaA"
                     /locus_tag="RHX79_001679"
     CDS             complement(26571..27848)
                     /gene="waaA"
                     /locus_tag="RHX79_001679"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HDV2196866.1"
                     /translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRH
                     PLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQ
                     HVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSA
                     AGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLA
                     AKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPD
                     AINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
                     NPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATTLAKEVSSLLTDADYRS
                     FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
     gene            28261..29319
                     /gene="rfaQ"
                     /locus_tag="RHX79_001680"
     CDS             28261..29319
                     /gene="rfaQ"
                     /locus_tag="RHX79_001680"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptosyltransferase
                     RfaQ"
                     /protein_id="HDV2196867.1"
                     /translation="MDKPFRRILLIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQ
                     DTIPILSENPEINALYGIKNKKAKASEKIANFFHLIKVLRANKYDLIVNLTDQWMVAI
                     LVRLLNARVKISQDYHHRQSAFWRKSFTHLVPLQGGNVVESNLSVLTPLGLDSLVKQT
                     TMSYPPASWKRMRRELDHAGVGQNYVVIQPTARQIFKCWDNAKFSAVIDALHARGYEV
                     VLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVTFPELGALIDHAQLFIGVDSAPAHI
                     AAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYREMPTRDQRDRNEMYLSVIPAAD
                     VIAAVDKLLPSSTTGTSL"
     gene            29316..30440
                     /locus_tag="RHX79_001681"
     CDS             29316..30440
                     /locus_tag="RHX79_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDV2196868.1"
                     /translation="MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGE
                     CPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVC
                     YAEKVAQEKGFFYRLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE
                     RFHILPPGIYPDRKYSQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEAL
                     ASLPDSLRHNTLLYVVGQDKPRKFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLH
                     PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAIAEPFRQETLNEILRKA
                     LTQSSLRQAWAENARHYADTQDLYSLPEKAADIITGGLDG"
     gene            30433..31230
                     /gene="rfaP"
                     /locus_tag="RHX79_001682"
     CDS             30433..31230
                     /gene="rfaP"
                     /locus_tag="RHX79_001682"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312532.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(I) kinase RfaP"
                     /protein_id="HDV2196869.1"
                     /translation="MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAG
                     KSYFLKWHRGTTLKEIIKNLLSLRMPVLGADREWNAIHRLRDVGVDTMYGVAFGEKGM
                     NPLTRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVATMVRDMHAAGINH
                     RDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRVPRRWRDKDLIGLYFSSMNIGL
                     TQRDIWRFMKVYFAAPLKDILKQEQGLLSQAEAKATKIRERTIRKSL"
     gene            31246..>31939
                     /locus_tag="RHX79_001683"
     CDS             31246..>31939
                     /locus_tag="RHX79_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide 1,3-galactosyltransferase"
                     /protein_id="HDV2196870.1"
                     /translation="MSAHYFNPQEMITKTIIFDERPAASVASSFHVAYGIDKNFLFGC
                     GVSITSVLLHNNDVSFVFHVFIDDIPEADIQRLAQLAKSYRTCIQIHLVNCERLKALP
                     TTKNWSIAMYFRFVIADYFIDQQDKVLYLDADIACQGNLKPLITMDLANNIVAVVTER
                     DANWWSLRGQSLQCNELEKGYFNSGVLLINTLAWAQESVSAKAMSMLADKAVVSRLTY
                     MDQDILNLILSGK"
BASE COUNT         7522 a         7903 c         8585 g         7929 t
ORIGIN      
        1 agtgaagtgt tgtccgttaa agagaaaatt ggttatggca tgggagacgc cgccagccac
       61 attattttcg ataacgtaat gttatatatg atgttctttt ataccgatat ttttggcatt
      121 cctgccggat ttgtcggaac catgtttttg gtcgctcgtg cactggatgc gatttccgat
      181 ccttgcatgg ggttgttggc cgatcgaacg cgctctcgct ggggtaaatt tcgtccgtgg
      241 gtactgtttg gcgcactgcc attcgggatc gtctgtgtac tggcctatag cacgccagat
      301 ctcagtatga acggcaaaat gatctatgca gcaattactt acaccctact taccttactt
      361 tataccgtcg tcaatatccc ttactgcgca ttgggtggtg taatcaccaa tgacccgact
      421 cagcgtatct cgctgcaatc ctggcgtttt gtgctggcga ccgcgggagg catgctttct
      481 actgttctga tgatgccact ggttaattta attggcggtg ataataaacc actcggtttc
      541 cagggcggta tcgcggtcct ttccgtggtg gcattcatga tgctggcatt ttgtttcttc
      601 accactaaag aacgcgttga agcaccacct acaacaacgt ctatgcggga agatttacgt
      661 gatatctggc aaaacgacca gtggcggatt gtcggtttac taaccatttt caatatcctg
      721 gcggtgtgcg tacgcggtgg ggcgatgatg tattacgtca catggatttt gggcacgccg
      781 gaagtgtttg tcgcttttct caccacttat tgcgtgggta acctgattgg ttccgcactg
      841 gcaaaacctc tgaccgactg gaaatgtaaa gtcactatct tctggtggac gaacgccctg
      901 ctggcagtga ttagcctcgc gatgttcttt gttcccatgc aggccagcat cactatgttt
      961 gtcttcatct tcgtgattgg tgtgttgcat caactggtga cacctatcca gtgggtaatg
     1021 atgtccgata ccgtcgacta cggcgagtgg tgcaatggta aacgcctgac cgggatcagt
     1081 tttgctggca cgctgtttgt gctcaaactg gggttggcct tcggcggcgc tcttatcggc
     1141 tggatgctgg cttatggcgg atatgatgcg gcagaaaaag cgcagaacag cgccacgatt
     1201 agcatcatta ttgcgctatt cacgattgtt ccggcgatct gttatttgct gagcgcgatt
     1261 atcgctaaac gctactactc actcacgacg cacaatctga aaaccgttat ggaacagctg
     1321 gctcagggta aacgccgttg ccagcaacaa ttcacctctc aagaagtgca gaactaagga
     1381 acggcaatga aaattagcga tggaaactgg ttgattcaac ctggcctcaa tttgattcac
     1441 ccgcttcagg tgttcgaggt tgaacagcag gataatgaaa tggtggtcta tgctgccccc
     1501 cgtgatgtgc gtgaacgtac ctggcagctt gatacgcctt tatttacgtt gcgctttttc
     1561 tccccacagg aaggtattgt cggtgtgcgg attgagcatt ttcagggggc gctgaataac
     1621 ggtcctcatt atccgctcaa tattttgcag gacgtgaagg tcacaatcga aaacacagaa
     1681 cgttatgctg agtttaaaag tggcaactta agcgcgcgtg tcagcaaagg tgagttctgg
     1741 tcactggatt ttctgcgcaa cggcgaacgt attaccggta gtcaggtgaa aaataatggc
     1801 tacgtgcagg acacgaataa tcaacgcaat tatatgtttg agcggcttga tcttggcgtt
     1861 ggcgaaacag tttacggtct gggagagcgc tttactgccc tggtgcgcaa tggccagacg
     1921 gtagagacct ggaaccggga cggcggcaca agtactgaac aggcgtataa aaatatcccg
     1981 ttctacatga ctaaccgtgg ttatggggta ctggtcaatc atccccagtg tgtctctttt
     2041 gaagtgggat cggagaaagt ctccaaagtg cagttcagcg ttgagagtga atatctcgaa
     2101 tactttgtta tcgacggccc gacgccgaaa gcggtacttg atcgttatac ccgctttact
     2161 ggtcgtccgg cgctgccgcc cgcgtggtcc ttcggcctgt ggctaaccac ttcatttacc
     2221 accaactacg acgaagcgac ggtaaacagc tttatcgatg gtatggcgga acgcaatctg
     2281 ccgctgcatg ttttccactt tgactgtttc tggatgaaag ccttccagtg gtgtgatttt
     2341 gagtgggacc cgctgacttt ccctgacccg gaagggatga tccgccgcct gaaagcgaaa
     2401 ggactgaaaa tctgcgtctg gattaacccc tatatcggtc aaaaatcccc cgtctttaaa
     2461 gagttacaag agaaaggcta tttactcaaa cgcccggacg gttcgctatg gcagtgggat
     2521 aaatggcagc caggtctggc gatttatgac tttaccaatc cggatgcctg caaatggtac
     2581 gccgacaaac tgaaaggtct ggtcgcgatg ggcgttgatt gctttaagac cgactttggc
     2641 gaacgtatcc caactgatgt tcagtggttt gacggttccg atccgcagaa aatgcataac
     2701 cattatgcgt acatctacaa cgaactggtg tggaacgtgc tcaaggacac cgttggtgag
     2761 gaagaagctg tcttgtttgc ccgctcggcc tccgtcggtg cgcagaaatt cccggtacac
     2821 tggggtggcg attgttacgc taactacgaa tcaatggcgg aaagcctgcg cggtggtttg
     2881 tctattggcc tttcaggttt tggcttctgg agccacgata tcggcggctt tgaaaatacc
     2941 gctccggcgc acgtttacaa acgctggtgc gcgtttggtt tgctctccag ccatagccgt
     3001 ttacacggta gcaaatctta tcgtgtgccg tgggcctacg atgatgagtc ctgtgatgtg
     3061 gtgcgcttct tcacgcaact gaaatgccgc atgatgccgt atctgtatcg tgaagctgcg
     3121 cgtgcgaacg cgcggggtac gccgatgatg cgggccatga tgatggagtt cccggacgat
     3181 ccggcttgtg attaccttga ccgtcaatac atgttaggcg acaacgtgat ggttgcgccg
     3241 gtgttcactg aagcgggcga tgtgcagttc tacctgccgg aaggtcgctg gacacacctg
     3301 tggcacaacg atgagctcga cggtagtcgc tggcataaac agcagcacag cttcctgagt
     3361 ctgcccattt atgtgcgtga taacacccta ctggcgctgg gcaacaacga tcaacgtccc
     3421 gattacgtgt ggcacgaagg cacggcattc cacctcttta atctgcaaga cgggcatgaa
     3481 gccgtctgtg aagtgcccgc tactgacgga tcggtgatct ttactttaaa agcagcacgt
     3541 actggcaaca cgattactgt gactggtgcg ggcgaggcga agaactggac gctgtgcctg
     3601 cgcaatgttg tgaaagtaaa tggtctgcaa gacggttcgc aggctgaaag tgagcagggg
     3661 ctggtggtga agcctcaagg gaatgcgctg acaattacgt tgtaatctat tgatggaatg
     3721 ccgggtacgt ctgagtcgta cccggcgaga ttgatgttta ccgcaccggc tccgtcgatg
     3781 taacttcacc gctggaaacg atgccagcat tcatggtttg agtcacttgc tgctttgcgg
     3841 cgttcacggc atgcaattgc ccgctaaccg taggtttcaa cgggacattg gcctgaatat
     3901 cgccactggc ggtaagctga atattgccgt cgccagtcaa cggtaattta ggccatcccc
     3961 actgttgcaa aatattcacc ggcacaccgc gtccattcag gctgatatgt gtctgacgtt
     4021 gtggcgtttg tgaaacactg gcggtggctt ccagaatgcc tttttcagta aatgcactca
     4081 gttcgctgat attcaccgtg ctgctgttgg cggtcagcgc cagcgacggg cgacgaacat
     4141 caacacgatt gaatgtcgcg gcggcggcat tcagattcgc cgagccactc cagacgcccc
     4201 atttatgatc ggtaaccagc gtcaggttgg caccgtaacc atcgagcgcg gtgagctgcc
     4261 acgggaagtc agggtcgata tcaatgatca gattgcggct ggcgctaaat ctcttcagtt
     4321 gcaggctgtt taaccaaccg ggtgtcgttt ccatccacaa ctgttgccag tttttcggca
     4381 aggtatattc cagcccggca attgccgcat catcaaggat caacgttttc ccgtcacgca
     4441 gccagttccc tgacgttctg accatacccc cttcccagcg gctggtgaac tggcgcagcg
     4501 ctacgccctg cggggaaaat tccgcgttta taatcgggtc aaataaatgc agcgaaccat
     4561 aaatgaactc gctagcgttc atcgacagtt tgccttcttg tgtctgccag tcatctttac
     4621 tgaaggtcat gttgcgcaag ctgagatcga ggtcggtcac cgcccagtcc ggaccttgca
     4681 aacgagcatc gatcacttcc aggcgaccaa tctgcaacga cgggacagag cgtaatggcg
     4741 caaagaagtc ggttagcgat ttttcgcttt gtagacggat atccgccatg cgcagatttt
     4801 ccacttgcca gctgccgtcg gcgttacgct gcgcgtttcc ggttaatgtc ccgcgggcga
     4861 tgtcggcacc caggttagtc agcgtaacgc gatcattatc aatactgcct tcaatcagta
     4921 cattggtggc aggaacatca ttgagcgaaa gcgatccggc actaaactga atctgcgcct
     4981 tcgtacccag cactttaccg gcttctggtg accacggaac cacgccgcca tttacccgct
     5041 gcgcgctcag tttccattcg ctattcgggc tattaaacgc catatcacgc agttgcagac
     5101 gatcggcttt gaacggtagc ggcgcggtct ggtcggtgag attcagcgtc ccgttttcca
     5161 gcaggatggt atcgacatgg cgtggttcgg tcagttgccg actgcttagc gcaatgtcga
     5221 cactttttgc caccagggtc gcgggctgac catcacgacc aaacgtgacg ttctccagca
     5281 cgatatgaga tggcgcggaa aaacggtgat ccatcgcccc gaaggccaga tgatagtcgc
     5341 tattctcgga aacccatgcg ctgatatgtt ctgctcccca gcgggtttgc agaagaaaat
     5401 agaggccagc gatcaccact aacagagcga tgagaatgta gagaagcagc ttcccaataa
     5461 atttcatggt cttccatccc gtgaaatgca cataagggag ttatgcacga tttacgcgca
     5521 atcctcaagg cgggaatggt gaaagaggtg agactgcggc ggtaattatc ttaccgccgc
     5581 cagtgaatta ctgtttttct ggtgggaaaa tcagattcag cacgatggca gtaataccgc
     5641 ccgcggcgat cccggaggag agcaggtttt tcagccattc aggggcaaac tgcaaaatca
     5701 gcggctgctg agacacgccc agaccaaccg ccagcgacag cgcgataatc agaatcgccc
     5761 gacggttcag cggctcacga gaaacgatac gcacaccgga ggcggcgatg gtgccaaaca
     5821 ttacaagcgt tgcgccgccc agaaccggtt ctggaatgtg ttgtacaaaa ccgctcactg
     5881 ccgggaacag acccagcacg atcaacatca gcgcgacgac aaaaccgaca tagcggctgg
     5941 caacaccagt caactggatc actccgttgt tttgcccgaa gcaggagttc gggaaggtgt
     6001 taaacaccgc cgaaacaaac gagttcaggc cgtttgccag cacgccgcct ttcaggcgtt
     6061 tcatgtacag cggaccggac actggctgtt cggaaacgtc agaggtcgcc gtgatatcgc
     6121 caatggtttc cagcgaagtg atcataaaga ccagcatcag cggcagcagc agactccatt
     6181 caatgccaag accgtaatag agcggcgttg gcaccataat cagttcttgc gtcatcggtt
     6241 cgttgctttc tggcaacatg cccataaacc acgccagcgc atatccggcc gccatcgcaa
     6301 tcaccagtga ggccacgcgt aagtaagggt tacgttgacg gttaagcagg ataattaagg
     6361 ctaagaccac gcctgccagc agcagatttt tcggtgcgcc gaaggtgtta tcgctcatgg
     6421 ctgcgtaacc gccgccaatg gacgttaacc caacctgaat tagcgacagg ccgataatca
     6481 tcaccacaac gccagaaacc agcggcgtaa taatgcggcg cgccagatgc agaacgcggg
     6541 agatcaccat ctcggtgcaa cttgccagca tcaacgtgcc gaacaaagcc gccatcatgg
     6601 taggaacatc agcaccaccg gttttcagcg cggtaccgcc cataatcagc ggggcaacaa
     6661 agttgaagct ggtgccctga atagacaaca gcccggagcc aaccggaccc caggccttaa
     6721 tttgaataat cgatgccaca ccggaggcaa acagcgacat actaataatg tgttgcgtgt
     6781 cttgtgccgg taaacccagc gcctggcaga ttaatagcgc tggcgtgatc accgcaacga
     6841 acatcgccag cagatgctga caggcggcaa acagggtttg aggaagcggc ggacgatctt
     6901 caagacggta aatcagttcg ctgttttgag tctgcgcaac cggttgcgca ttttctgact
     6961 cgagggtgga aacagacatc gaaaacaatc ccgtggtagc aaagcgggca ttttagctga
     7021 ccgaaagaga aaagcaaacg tttgccacat cctcatctaa atatttaaat gagataaatg
     7081 cactttttta tataactttt ggtatttttc tgcttaaaat ccatgccatt tgttcattaa
     7141 cagctgagaa tttgacccag gaaagcataa ctcgataccc gtcatagttc atgaagttgc
     7201 cactgcgcga tgaagtatga cgagtatgaa agagtgatgc ggatacaaag gagtaactat
     7261 gtttcatctc gatactttag caacgcttgt tgccgcaacg ctgacgttgc tgctcgggcg
     7321 taagttggtc cattccgtct cctttttgaa gaaatacacc ataccggaac ctgttgcggg
     7381 tggtttgttg gtggcgctgg cgctactagt actgaaaaaa agcatgggct gggaagtcaa
     7441 ctttgatatg tccctgcgcg atccgttaat gctggctttc ttcgccacca ttggcctgaa
     7501 cgccaacatt gccagtttgc gtgccggtgg gcgtgtggtt ggcatcttct tgattgtggt
     7561 tgttggtctg ttggtgatgc aaaatgccat tggcattggt atggctagcc tgttagggct
     7621 tgatccgctg atggggctgt tggccggttc tattacgctt tccggcggtc acggtacggg
     7681 cgctgcgtgg agtaaattgt tcattgaacg ttatggcttc accaatgcga cggaagtggc
     7741 gatggcctgt gcaacgttcg gtctggtgct gggcggcttg attggcggtc cggtggcgcg
     7801 ctatctggtg aaacactcca ccacgccgaa cggtattccg gatgaccagg aagtcccgac
     7861 ggcgtttgaa aagccggatg tgggccgcat gatcacctcg ctggtgctga ttgaaactat
     7921 cgcgctgatt gctatctgcc tgacggtggg gaaaattgtt gcgcaacttt tggctggcac
     7981 tgcttttgaa ctgccgacct tcgtctgtgt actgtttgtt ggcgtgattc tgagcaacgg
     8041 tctgtcaatg atgggctttt accgcgtctt tgagcgtgcg gtatccgtgc tgggtaacgt
     8101 aagcctgtcg ttgttcctgg cgatggcgct gatggggctg aaactgtggg agctggcttc
     8161 gctggcgctg ccgatgctgg cgattctggt ggtacagacc atcttcatgg cgttgtatgc
     8221 catcttcgtt acctggcgca tgatgggcaa aaactacgat gcggcagtgc tggctgcggg
     8281 tcactgtggt tttggcctcg gtgcaacgcc aacggcaatc gccaacatgc aggcgatcac
     8341 tgaacgcttt ggcccgtcgc acatggcgtt tttggtggtg ccgatggtcg gtgcgttctt
     8401 tatcgatatc gtcaatgcgc tggtgattaa gctgtattta atgttgccga tttttgccgg
     8461 ttaaaaatga aaaagcgtcg gaaggaaccg gaaacgctac gtgaacactg tcgccatatt
     8521 tttggtgatg agccgccagt gctctgtgta tgggaaacgg aatttgatta cgcagatgcc
     8581 gaactcaagg cgctggcggc taaagagtgg cagcagatca gcgaatggga tttgagtgct
     8641 tactatgtac tcaatctcgt ttataacgaa ccgatgcaaa tagagttgtt tcgctatctg
     8701 tttccgctct gcctggcgca atggcatgaa accgttttag ctggcggtta tggtgatcac
     8761 ttcgaagaat ccttaatgaa ggcattgtgt cggccctatc tctggcagga gatgatgaat
     8821 gcttcccaac gccagcaggt acggcaattt ttactggaca ccgcgttgca gcgtatggat
     8881 aacgagcgtg gtttcaataa cgttctttgc tggctggcgg tgttcaatac tctgggtggg
     8941 gccgcgccgt taattcgttc tctctggtcg cgctggtggg cgctggatac gccaggaaaa
     9001 gcggtgtgtg ctattcagta tgccgcgcat ctaatttatc ccatagaagc caatccgtta
     9061 tggtcgcaag aatggatagg ctgggggcat ccattaggcc ataaagatgg ctggtcctct
     9121 gataatcgcg cttttcttcg ccaaatgtta acacctgaaa tgattgtggc tggcgtacag
     9181 gcagcggctg aaattctgcg tggtgaaccg gaaggcgcaa tggcggcgcg aattgcacag
     9241 gatgcgtatg aggcaatgga tatcctcact atccagattg aagatttact gcgtgacttg
     9301 tcttgtgatg agtctggtca tgcgttggag taacgttccg tctccggcat ccagcgttct
     9361 atcagggctt ttgcttgttg tgggtaacgt tcgtgaatat gtcgcgccag gcgctgaact
     9421 tccgggatca tcgcctgatc gcgcagtaaa tccgccactt taaactcagc attacccgtc
     9481 tgacgcgtac ctaacagttc acccggtccg cgaatctcta agtctttctg tgcaatcaca
     9541 aaaccgtcgt tgctgtcgcg cagcacttgc agccgaattt gcgcggtttt ggagagcggc
     9601 gttttgtaga gcagcacgca gtgagaagcc accgcaccac gacctacacg cccgcgaagc
     9661 tggtgtaact gcgccagacc cagacgctcc gggttttcga taatcatcag actggcgtta
     9721 ggcacatcaa cgccgacttc aataacggtt gtggcaacca gcaggtgtag ctcaccttgt
     9781 ttaaacgacg ccatcaccgc ctgtttctcg gcaggtttca tccgcccgtg taccaggcca
     9841 acgttcaact ctggtagcgc cagtttcaac tcttcccagg tagcttccgc cgcctgcgct
     9901 tccagcaatt ccgactcttc aatcaacgta caaacccagt acgcctgacg accttcagtt
     9961 atgcaggcgt ggcgcacgcg gtcaatgatg tcggtacggc gggtatcagg aatagcgacc
    10021 gtagtcactg gcgtgcggcc tggcggcagc tcatctatca ccgaggtatc gagatcggca
    10081 tacgcagtca ttgccagcgt gcgggggatc ggcgtggcgg tcatgatcaa ctgatgcgga
    10141 tggaagcctt gctgctggcc tttctcccat aacgccagac gctgatgcac gccaaagcga
    10201 tgttgttcgt cgataatcac cagcgccaga ccgttaaact gcacctgttc ctggaagatg
    10261 gcgtgcgtac caacaatcat ctgcacctga ccgctggcga tggcttcctg ctgagacagt
    10321 cgcgctttgc ctttctgctt accggcgagc cagcccactt cgataccgag cggttcaaac
    10381 cagttgcgga agttattggc gtgctgctcg gcgagtaatt cggttggtgc catcaatgct
    10441 acctgtttgc cgtgggcaat cgcacgcaac gcggcgaggg cggcgaccag cgttttaccg
    10501 gaacctacat cgccctgcac cagacgcatc atcggcacat ccagcgccat atcgcgctcg
    10561 atctccgcca ctacgcgtgc ctgtgcgccc gtttgcttga acggtaaggc ggcgaggagt
    10621 ttatttttca gcgcatcatt ggcgctcagc ggctgggcat gaaaacgctg tgctccggca
    10681 cgtaaggcta acatgctgag gttgtgcgcc agcagttctt ccagaatcag acgacgttgc
    10741 gccggatgct gcccggtttc cagatcgcta agctgtagcg tcggtggcgg gcggtgcaaa
    10801 gtgcgcaacg cttccggtag cgtcatcatt ccttgtgaca gttccggcgg caggagttct
    10861 tcaatggcgc aggtgtcgag cagatccagc gcctggtcgg ttaatttacg cagcgtggcc
    10921 tgctttacgc cttccgttgt tggataaacc ggcgtgagcg tttcctgtaa ttctggcgtg
    10981 ctgagatcgc cctgcacgcg gtattccggg tggatcatct ccgcaccata tttaccgcgc
    11041 tttgcttcgc cataagccag tacacggcgg cccgtcgcca ggctattttt cattgccgcg
    11101 ctgaaattga aaaagcgcat ggtgaggatg ccggaaccgt cgctgatctg gcaggtcatc
    11161 atccgccgac cgccgaagga gatattgcag ttcagcactt cgccttccac cgtggcataa
    11221 acgcccggca gtagttctcc gatggggtag agatgggtgc gatcttcgta gcgcagggga
    11281 aggtgtaaga gtagatcctg cacggtatgc aggttgattt tcgccagttt gttactaagt
    11341 gctgcgccaa cgcccgttag ggaactgagt gggacagcat ctaacaggcg acctttcatg
    11401 gcacttaccc tgcagcctgc atagtagccc accagtcggc atcagcttcg atctcgcctt
    11461 gctgattgac gtggggataa ggcaggcctt tgcgttttgc gactttcgcc agcaccggat
    11521 agccgccttc aaacaacagg cgttgttgct ctgcttccgg caacatgctg ttttcacgca
    11581 ggtacatgcc tgcattttgc cgctgacgct gggcttcgta aagaatgagg gctgaggcaa
    11641 cggaaacatt cagcgactgc accatgccga tcatcggaat gatgatgtcc tgatccgcca
    11701 gggccaatgc ttcctgcgtg atgcccgttt tctcctgtcc catcaaaatg caggtcgggc
    11761 gagtgtaatc aatttcgcgg aaatcgacag cgttatcaga aagatgggtt gccagaatct
    11821 gcatgccctg gcctttgaga tgagcgacgg catcgccaat ggtgcggtgt gttttcacct
    11881 gtacccagct gttactaccc gccgctgccg aagccatggt gcgcatgcgg ctaccaggcc
    11941 agacggcgtg aacttcatgt acgccaacgg catctgcggt acgaataatc gcagaaacgt
    12001 tatgaggttt gtggacctgc tccatgcaga cggtcagatc aggctgccgc ctggcgagca
    12061 tttcgcagat gcgtgcataa cgtgttgggt tcataaaaca ttaatttcgg tttcgggtga
    12121 ctttaatcac gtctggcatc acgcggattt tgcgcatgat attcgccaga tgcacacggt
    12181 cacgggcggt cagacgaata aaggcgctgt agacgcgacc atctttctct tccgtattca
    12241 aactttgaat attcgaagtc gtggtgttaa ttgccgccgt caggtttgcc agcgcgccct
    12301 gatgattgaa catctccacc ttgatttcgg tgatgaactc ctgcgccgtc tctttatccc
    12361 attccacagc cataaacttc tctggctctt tctggtagcc acggatgtta cggcaggatt
    12421 catggtggat caccagacct ttaccggggc tgacgtgggc gataatcggg tcgccaggaa
    12481 tagggcggca gcatttcgca aaggtgatca gcacgccatc ggcaccttta atgggcagat
    12541 gtccgtggct ttgggttgcc ggtggaatgg aggcgtcccc atgttgcaga tttttcgcga
    12601 ccaccacgct cattgcgtta ccaagtccga tttctgccag cagatcgtca agcgttgcca
    12661 gcttcatgcg atccagctcg cgctgaatat tttcctgcgg gatttcattc agcttacggc
    12721 taccacccaa agcatggttg agcagacgac ggcccaggct tacagaatca tcacgcttga
    12781 ggtttttcag caactgacga attttggcgc gcgctttcga gctaacgaca aagttcagcc
    12841 aagcggcatt cgggcgagcg cccggagcgg taatgatttc aacggtctga ccgctagtaa
    12901 gcggctgcga cagcgggtaa ggctggcggt cgacgcgtgc gcccacgcag gcatggccga
    12961 tatcggtatg cactgcataa gcgaagtcga cgggcgttgc accggcaggc agctcgacaa
    13021 tgcgcccttc cggtgtgaaa acgtaaatct catccgggaa gagatcggat ttaacgctct
    13081 cgataaattc aaacgaacta ccggcgctct gttgcagctc cagcaggctt tgcatccagc
    13141 gctgggcgcg gatttgcgcg gtggtgctgg tttcgccgtg ctctttataa gcccagtgcg
    13201 cggcaacacc catctccgcc atctgatcca tatcttcggt acggatctgg acctcaaccg
    13261 gcacaccgtg cgggccgatc atcgaggtgt gcaaagactg atagccgttc gcttttggaa
    13321 tggcgatgta gtctttcacg cgacccggac gcggcttgta caggctatgc atttgcccga
    13381 gcacgcgata acaggtgtcg gaatcattga cgatcacgcg gaaagcgtag atgtccatga
    13441 ttgagtgaaa acgctgctct ttgagcacca ttttgcagta aatcgaataa agatgcttct
    13501 cgcgaccact gacgcggcac ggaattcccg cttcctgcaa acgcccttcg atttcagaga
    13561 ggattttttg gatcatctct ttacggttgc cgcgcgcggc tttcaccact tctttaatta
    13621 cgcggtaacg attgggatac agcgcctcaa aacccagctc ttcgagttcg gttttaatgt
    13681 ggtggatacc taaacggtgc gccagcgggc tgtaaatttc gagagtttca cgggcgatgc
    13741 ggcgacgttt gtccgggcga agtgagccca gcgtgcgcat gttgtgggta cggtcggcaa
    13801 gtttgatgag gatgacgcgg atatcctgca ccattgccat aatcatcttg cgaaagtttt
    13861 cggcctgcgc ctctttctta tcacggaact tgagtttatc aagtttcgac accccctcta
    13921 ccagctcggc gacgctttta ccaaaaagct gttccatatc ctggtaggtg gcgggagtat
    13981 cttcaatcac gtcatgcagc agcgccgcca tcagcgtttc atagtcgagt ttcatctcgg
    14041 ccagaatgca ggcaaccgct accgggtgcg tgatataggg ttcaccgctt gaacgtgttt
    14101 gcccctcgtg agcatcacgt gcaacgagat acgcctgccg cagacgcttg atttggtctt
    14161 ccggcaggta ggtttgaatc agttgattca ggctttcaaa cagatacaag ggcgacccgc
    14221 tttgtgatta acgacgacct tcagcaatag cggtaacggc ttgtaattca gcggcttcct
    14281 gctcttgctg ttcctggcgt tcgcgaacgt cgaggatctg gttgttgatc agaccttctt
    14341 cgatttcgcg cagcgcgatt acagtggttt tatcgttttc ttccggtacc agcggatcct
    14401 ttccgcctac ctgcatctga cgagcgcgac gcgcggcgac cagtaccagg tcaaaacggt
    14461 taccaatttt ctctacagcg tcctgaacag ttacgcgtgc catacttaaa aagctccaca
    14521 ggtgaagaaa tgactgggca tgatactgaa atcaggttca gtctgccaac aatttgctga
    14581 ttaaagcgtc atgacgctgc ttttggcggc tcatgcgcag acgttcggcg cgaataatgg
    14641 tcttcaaatc ggtcaacgcg gtatcgaagt catcattcac aatcagataa tcatattcgg
    14701 cgtaatggct catttctgca acagcttgcg ccatacgctt tgcaatgacc tcttcgctgt
    14761 cctgaccgcg accgcgtaga cggcggtcca gttcaatttt ggacggcggt aaaataaaga
    14821 tactccgcgc gtgcggcatc ttctggcgaa tttgctgcgc accctgccag tcgatatcga
    14881 gaaaaacatc gacaccggtc gccagtactt gctcaatggc ctcacgcgaa gtgccatagt
    14941 aattaccaaa aacttctgcg tgttcgagga acgcatctct gctaatcatt tctttaaatt
    15001 catcatgatt aacaaagaaa taatgttcac cgtggacttc accaggacgc ggttggcgtg
    15061 tggtgtgtga aacagaaacc tgggtgtcat acaacggttg ggtttttaat aaagcctgaa
    15121 tcaggctgga tttacccgcg ccactggggg cagaaacaat ataaagcgtg ccttgagcca
    15181 tgagtatctt tcgtatgtga ttagcgaaat aaagcctaca tacgagctta ttatacacgg
    15241 cgcggccatg tgacgtagcc cttgctcaca ctttttgcgc aaagttgttg cgttttgcgt
    15301 agctgtttcc gcatttgcct gtgatttact gcaataaaga cgattctcag gaagcgtcct
    15361 cgcagactcc gtttttgcca ctcggctttg ccttcaccac gttgtatatc tgccagcctg
    15421 actacagcgg aggtgaagat gaaagtatgg atggcgatat taataagtat cttgtgctgg
    15481 caatcatctg tgtgggcggt ctgtccggcc tggtcgccag ccagagcaca ggaagaaatt
    15541 tcccgcctgc aacagcaaat aaaacagtgg gacgatgact actggaagga aggaaaaagt
    15601 gaggtggaag acggtgttta cgatcagtta agcgcccgtc ttacgcagtg gcaacgctgc
    15661 tttgggagcg agccccgcga cgtgatgatg ccgcctttaa atggtgcggt tatgcatccg
    15721 gttgcccata cgggtgtacg caaaatggtg gataaaaacg cattaagtct gtggatgcga
    15781 gaacgtagcg atctttgggt gcagccaaaa gttgatggcg ttgcggtaac cctggtttat
    15841 cgggacggga aactgaacaa agcaatcagt cgcggtaatg gcctgaaagg cgaggactgg
    15901 acgcagaaag ttagcttaat ttccgctgtg ccgcaaaccg ttagcgggcc tttagccaac
    15961 agtacgcttc agggggaaat atttctccag cgcgaggggc atatccaaca acaaatgggg
    16021 ggaataaatg cccgcgcaaa agttgctggc ttgatgatgc gccaggacga tagcgacacg
    16081 ctgaattctc tgggcgtttt tgtctgggca tggccggatg gaccgcagtt aatgtctgat
    16141 cgtttaaaag agctggctac cgcaggtttt actctaacgc agacgtatac ccgtgcggtg
    16201 aaaaatgctg atgaagttgc gcgcgtacgc aatgagtggt ggaaagcgga attacccttc
    16261 gtcaccgatg gcgtagttgt gcgaggggcg aaagaacccg aatcccgcca ttggctacca
    16321 ggccaggcag aatggctggt ggcctggaaa tatcaacctg tagctcaggt tgccgaagtg
    16381 aaggcgattc agtttgcggt gggtaagagc ggtaaaatat cggtggttgc gtcactcgca
    16441 cctgtcatgc tggatgataa aaaagtccag cgggtgaata ttggttccgt caggcgctgg
    16501 caggagtggg atattgcgcc tggtgatcag atcctcgtca gccttgccgg tcagggtatt
    16561 cctcgcattg atgatgtggt ctggcgcggt gcagaacgta caaaaccgac accaccagaa
    16621 aaccgcttta actcgttgac ctgctacttt gcttctgatg tttgtcagga acagttcatt
    16681 tcacgcttag tctggctggg gtcaaaacag gttctggggc tggatggcat tggtgaggcc
    16741 ggctggcgcg cgctgcatca gactcatcgc tttgagcata tcttttcctg gcttttatta
    16801 acgccagagc aattacagaa cacgccgggg atcgcgaaaa gtaaaagtgc gcagctatgg
    16861 catcagttta atctggctcg taagcagcct tttactcgct gggtgatggc aatgggaata
    16921 ccgctaaccc gggcggcgct taatgccagt gatgaacggt cctggtcgca acttttattt
    16981 agcacggagc agttctggca gcagctgccg gggactggat cggggcgcgc cagacaggtt
    17041 attgaatgga aggaaaatgc gcaaatcaag aagctgggca gttggctggc tgcccagcag
    17101 atcacaggtt ttgaacctta gtgtccttcg tggctgtagt aaaagaccgg taatcccagc
    17161 ttaaggcgta gcgccagtaa gcgggcaaaa aagccgaata ccagggtgga gataattacc
    17221 acatcatggt tagaaacata gtgttgcagc gcgatgtaca gcacggcgga ggcaaatgag
    17281 acaccggcat acaactcttt ctggaatacc agtgggatac gtttacagaa catatcgcgc
    17341 aaaacgccgc caaacacgcc ggtagttacc gccgcgacaa cggcaataat tgggccgtgc
    17401 cccatatcca gtgcaacctg tgcgccgatg atagaaaaga ccaccagtcc aagcgcatcg
    17461 agcaccagaa acactttgcg caggtaaggc attacaggag caacgatagt ggtgagtact
    17521 gcggcggtag cgacgataat cacatattcc gggtgtttga cccagccgag cggatagtgg
    17581 cccagcagaa tatcgcgcac tgaccctccg ccaattgcgg tggcggtcgc aataataatt
    17641 acgccaaatg tatccatgcg gcgtcgcccg gccgccagag cccccgtcat ggcttcggca
    17701 gtaatgccaa ccaaatacaa aatgtgtaac agcatggttc tctccctaaa aatctgtctg
    17761 gcagggtagc gatttgtgcg tattgtcacg attgagattt tttaaggtga gaggaaattg
    17821 ataacttgta gttatgtgaa atcgctattt tctgtagcgt agatgcattc ttctgacttc
    17881 ttgtctgaga aaatgcataa gaaaaaatag gttaaaactg aggggggaaa agaaaggtgc
    17941 aatgtttagc cattgtgttc actgcacctg gaccttggct tacgcatcgg gtgtctcaat
    18001 caacaaaaag agtttttcgt ttctgctatt tcttctctgt aatttttaca ctgttttcca
    18061 actgcttgat gctgacctgc ggggtcggca actcctcagg catggttccg ccaagttcct
    18121 gaatggtttg cctcaccttg ctacccacgt caaagtgtgt ggtattagct tgctgtgctg
    18181 cctcaaccaa ttgtttgtta tgttctttca actcatttct cagaaacaga cgcttttcgt
    18241 cttcacgaag ttgcttaaat gcttcatcgt cagcaagctc ctgccgtcgg gtctggatag
    18301 caaaataagt ctgccctgcc gcaatgaccg gtttcgcggg gtcgccgttt tgtactacca
    18361 ggtaacaggc atagcgggag agtacgatgt cttttaatgc tcttttggca tttgagccaa
    18421 ttttgaccat atcgaggatc tcctcgaaat ggtcatcaat tgtgtgacca ctgttctcac
    18481 aggcctcttt ggcgcgcgtt aatacaggta taaagtgacg atactctgaa taacccagta
    18541 gtttcccaag ttgtcttgct gaccattgtt ctgctccgtt tgcattaatc agttttatct
    18601 cttcaaaagg ttgatgatgt tcgttcattg cccactccat gtgatatcga ttgcaaagaa
    18661 agtaaatctg taactgtatt tatatacagt tgtgagtatc tcacgttctc agtgtgctgg
    18721 gcaaaaaaac atcgcaaaat ctggagcagg cacgcaaaac agaattgaag ttgcggggaa
    18781 gaaaaatgcc gctctgtttg agtgggcggc atttgtgaag gctgaaaagt aagaattagt
    18841 gttacgagtt actcaatatt ctgaatctgc tcgcgcatct gctcaatcaa cactttcagc
    18901 tcgatggcgg agtttgtcac ttcggcattg atagatttcg acgcaagagt gttcgactcg
    18961 cggttgaatt cctgcatcat aaagtccaga cgacgaccaa cggcttcttt tttcttcaga
    19021 atgttgtagg tctctttgac atgcgcttcc aggcggtcca gttcttcggc aacgtcaatt
    19081 cgttgtgcca gcagaaccaa ctcctgctcc agacggttgt tttccaactg aacctgagca
    19141 tcttccagct tcgcgaccag acgctcacgc tgccattgca ggatttccgg catatgggcg
    19201 cggactttga ccacttcggc ggtgacgcct tccagacgct gctcgatcaa tgctttcagt
    19261 gcctgacctt cggtttcgcg cgcgacaata aagtcgtcca gcgtaccatc cagcgccgcg
    19321 agaatttcag cggcaatggc gtcgagatcc tgctcctggg ctgccatcac gcccggccag
    19381 cgcagaatat caaccgggtt gatttcccct tcgtcactct gcatttttac ccagttcgcg
    19441 gcagttacca gctgtttagc cagtttttca ttgaggatca gctcaccttg tgcgctaaca
    19501 tctggctcat agcgcagggt acattccact ttaccgcgcg tcaggcgaga acgaatacgc
    19561 tcgcgaacga caggttcaag gctacggaac tgctccggca gacgaaagta agtttccaga
    19621 taacgctggt ttaccgagcg catttcccag gttgcgctcc cccattcacc cttgatttca
    19681 cgccgggcgt aggcggtcat actgcggatc atagacgttc ctgtttataa aaggagaggt
    19741 ggaaggatta tagccatcga tgccttgtca ggataggaat aaccgccgga agtccgtata
    19801 atgcgcagcc acatttgttt caagccggag atttcaatat gcgtccagca ggccgtagca
    19861 ataatcaggt gcgtcccgtt accctgactc gtaactatac aaaacatgca gaaggctcgg
    19921 tgctggtcga atttggcgat accaaagtgt tgtgtaccgc ctctattgaa gaaggcgtgc
    19981 cgcgcttcct gaaaggtcag ggccagggct ggatcaccgc agagtacggc atgctgccac
    20041 gttctaccca cacccgtaac gctcgtgaag cggcgaaagg taagcagggt ggacgcacaa
    20101 tggaaatcca gcgtctgatc gcccgtgctc ttcgcgcggc agtagatttg aaagcgctgg
    20161 gtgagttcac cattacgctg gactgcgacg tgcttcaggc tgatggtggc acgcgtaccg
    20221 cgtcgattac gggtgcctgc gtggcgctgg cagatgcgct acagaagctg gtggaaaacg
    20281 gcaagctgaa aaccaacccg atgaaaggga tggtagccgc agtttctgtc ggtattgtaa
    20341 acggtgaagc aatttgcgat ctggaatacg ttgaagactc agccgcagag accgacatga
    20401 acgtagtgat gaccgaagac gggcgcatca ttgaagtgca ggggacggca gaaggcgagc
    20461 cgttcaccca tgaagagcta ctcaccttgt tggcgctggc ccgaggggga atcgaatcca
    20521 ttgtagcgac gcagaaggcg gcgctggcaa actgattttt aaggcgactg atgagtcgcc
    20581 tttttttgtc tgtagaaaag gaagatgagg agcgaaggca tgaaaccata tcagcgccag
    20641 tttattgaat ttgcgcttag caagcaggtg ttaaagtttg gcgagtttac gctgaaatcc
    20701 gggcgcaaaa gcccctattt cttcaacgcc gggctgttta ataccgggcg cgacctggca
    20761 ctgttaggcc gtttttacgc tgaagcattg gtggattctg gcattgagtt cgatctgctg
    20821 tttggccctg cttacaaagg gatcccgatt gcgaccacta ccgccgtggc gctggcggag
    20881 catcatgacc ttgacctgcc gtactgcttt aaccgcaaag aggcaaaaga ccacggtgaa
    20941 ggcggcaatc tggttggtag cgcgttacaa ggacgcgtaa tgctggtaga tgatgtgatc
    21001 accgccggaa cggcgattcg cgaatcgatg gagattattc aggctaatgg cgcgacgctt
    21061 gctggcgtat tgatttcgct tgatcgtcag gaacgggggc gcggcgagat ttcggcgatt
    21121 caggaagttg agcgtgatta caactgcaaa gtgatctcta tcatcaccct gaaagatctg
    21181 attgcctatc tggaagagaa gccggaaatg gcggaacatc tggcggcggt taaggcctat
    21241 cgcgaagagt ttggcgttta aagaaactcg ccggatgaaa agtcatccgg cgtcatatta
    21301 ctgcaactgc gcggcaatta gcggccagcg ggcgtcaaaa tcatccgtcg ggcggtattt
    21361 aaattcgctg cggacaaaac gtgacagcat accttcacag aaggccagga tctggcttgc
    21421 cagcagggtt tcatcggtgg tgtaaccttc accctcacgc attctctttt cacgcaatac
    21481 ctgacgcagc tgcgcttcaa tacgctcgaa cagctggttg atacgccctt gcaggcgatc
    21541 ctgttcaaac atcagcgcat gaccagtgag gatgcgggtc aggccaggat tacgctcacc
    21601 aaaaccgaga agcagcaaca caatcagacg caggcgcgct gtggtgtctt tctcatcttt
    21661 cagaatcaga ttgatgcgag taatcaggct atcttcgata aactcaatca ggctatcgaa
    21721 catgcgagtc ttactgggga agtggcgata cagtgccgct tcggaaacgc cgacagaggc
    21781 ggccagtttt gccgtcgtga tacgttggct tccatcgctg gattccagca tcagcgccag
    21841 agactgaagt atttcctcgc gacggttcct tttcgcagtt tgtttttctg ccatgttaca
    21901 aaatacccct gaaaataagc acttgccagg cggcacccac gctatgaccg caaacgaaat
    21961 gtttgcggct atgttatgac gttattcgga tgcgtatgtg ttactgacga ccagagtgac
    22021 caaagccgcc ttcaccgcgg tcggtggcgt cgaaatcttc caccagatta aattcagcct
    22081 gtactaccgg aacaaaaatc atctgggcga tgcgttcgcc aggttgaatg gtgaagctgt
    22141 cctgaccacg gttccaaacg gaaatcatca actggccctg atagtcagaa tcgatcaatc
    22201 ctaccaggtt accaagcacg ataccgtgct tatgtcccaa tccggagcgc ggcagcatca
    22261 ttgccgccag tgaaggatcg gcaatatgaa tcgccagccc ggtcggaacc agcgtagtgt
    22321 cacccggagc cagttctacg gcgtcgtcga gacaggcacg caggtcaagt ccggcagagc
    22381 cagaggtggc ataagtcggg agcggaaatt ccttcccaac gcgcgggtcc agaatcttaa
    22441 cgtcgatttt tttcatcata acgggtcacg atctcgtcga gtaataattg gccaaggagc
    22501 tctttgcgct caagcggtaa gactttatct ccgtcctgcc agaaaaggtg taatgcgttg
    22561 ttgtcgctgt taaatccttg agttggctgg gaaacatcgt tcgcgcagat cagatcaagg
    22621 tttttacgga tacgtttttg ccgggcgtat tcttccacat tatttgtttc ggcggcaaat
    22681 ccaacgacgt agggtcgatg gtcttttagt gcggcaacgc ctgcgacgat atcggggttt
    22741 ttaaccattt ttattgttaa ttcatcaccc tgcgtggcct gctttttgat tttttctggg
    22801 gccacggtag ctgcgcgata atccgccacg gcggcgcagc cgataaaaat attttgctgc
    22861 tgtacagaag cattcacggc ggcttccatt tccagcgcgg tcatcacatc aacacgttta
    22921 acaaacggtg gcgtcggtag tgaaaccgga cctgatacca gcgtgacgtt cgcgccacga
    22981 cgggcagcgg cggcggcgat tgcaaaaccc atcttgccgg agctgtgatt agagatataa
    23041 cgcacgggat cgagcggttc acgcgtcgga ccggcggtaa tcataatgtt cagatgtttc
    23101 aggtcgttga cgggcgaaaa atgcgctacc gccatatcca caatggttaa cggatcgagc
    23161 attcgccctg ggccgatatc accacaagcc tgactgccac tgtctggccc ccagatgagc
    23221 aaaccacggg aggcaagcac ctctaaatta tgctgcgtgg cagcggcacg gtacatctgc
    23281 tggttcatgg cggggagcac ggctacaggc gcaggtgtag ccagacaaat cgtcgatacc
    23341 aggtcattcg ccattccggc agcaacacgg gcaatcaaat ctgccgtggc aggggcgaga
    23401 atcactaaat cagcccattt acccagctca atatggccca tagcggcttc ggctgccggg
    23461 tcaagcagac tgtcggaaac gggataccca gaaaccgcct gcaagctaag tggggtgata
    23521 aaggcttttg ccgcttcggt catggctacg cggacgtcgg ccccgcgatc gcgcaaacga
    23581 cgcaccagtt cagggatttt ataggcagca ataccgccgc taacgccgag aacgattttt
    23641 ttaccggcca ggctcatgat gatttttcct gtagggtgac accagaagtt ggcgatttta
    23701 tcacaatact tttgttgtcg tgccttcacc tgagattcac tttgcgaggc gctttccagg
    23761 attgaaaact ggccgtcgat ttaacggaac ggctatgaca ggatgcgagc accacaaagg
    23821 aggtgaaggt gaaaaacaat gcacagctgt tgatgccgcg cgaaaaaatg ctgaagtttg
    23881 gtattagcgc cttaacggat gtcgagctgc tggcgctatt tctgcgtacc ggaacgcgcg
    23941 gtaaagatgt attaaccctg gcaaaagaga tgttggagaa tttcggctct ctttatggct
    24001 tgttaacctc tgaatatgaa caatttagtg gtgttcatgg aattggcgta gcgaaatttg
    24061 cccagttaaa ggggattgct gaactggcgc ggcgttacta caacgtgcgg atgcgtgaag
    24121 aaagcccttt actcagcccg gagatgacgc gggaattttt acaaagccag ctcacgggtg
    24181 aggagcggga gatctttatg gtgatctttc tcgactcaca acaccgggtt ataacgcata
    24241 gccgactttt ttccggcacg ctaaaccatg ttgaagtcca tcctcgggaa attatccgcg
    24301 aagcgataaa aataaacgcc tcggcgctga tccttgcaca taatcaccct tcgggttgtg
    24361 ctgaacccag taaagcggat aaactcatta ctgaacggat aataaagagt tgtcagttca
    24421 tggatttacg cgtgctcgac catatcgtga ttgggcgtgg agagtatgtt tcttttgccg
    24481 aacgcggctg gatttaaccc gctatgcgcg atccttcggg atctttgtct gttcgggact
    24541 tgagcacatc gctgagtcag cgtatactac gccacctttg agaatctcgg gtttggcatt
    24601 tgggcctggc aatcgagagt tcacatagaa ctgcgatgac cgggctgtaa agcctgacga
    24661 ggcgccaata ccccatacga agctcgagct aatttgattt ttggagaata gacatgtccc
    24721 gagtctgcca agttactggc aagcgtccgg tgaccggtaa caaccgttcc cacgcactga
    24781 acgcgactaa acgccgtttc ctgccgaacc tgcactctca ccgtttctgg gttgagagcg
    24841 agaagcgttt tgtcaccctg cgcgtatctg ctaaaggtat gcgtgtaatc gataaaaaag
    24901 gcatcgatac agttctggct gaactgcgtg cccgtggcga aaagtactaa gtacttagag
    24961 gaaataaatc atggctaaag gtattcgtga gaaaatcaag ctggtttctt ctgctggtac
    25021 tggtcacttc tataccacta cgaagaacaa acgtactaag ccggaaaaac tggaactgaa
    25081 aaaattcgat ccagttgttc gtcagcacgt gatctacaaa gaagcgaaaa tcaaataatt
    25141 ctcgctttga tgtaacaaaa aacctcgctc cggcggggtt ttttgttatc tgcttgcccc
    25201 catattgatt gcatctgttc attcctggag atgctatgcc tgaattaccc gaagttgaaa
    25261 ccagccgtcg cggcatagaa ccgcatctcg ttggtgcaac cattcttcat gcagtggtgc
    25321 gcaacggacg cttgcgctgg ccggtttcag aagagatcta ccgtttaagc gaccaaccag
    25381 tgcttagcgt gcagcggcgg gctaaatatt tgctgctgga gctgcctgag ggctggatta
    25441 tcattcattt ggggatgtct ggcagcctgc gcatccttcc agaagaactt ccccctgaaa
    25501 agcatgacca tgtggatttg gtgatgagca acggtaaagt gctgcgctac accgatccgc
    25561 gccgctttgg tgcctggctg tggaccaaag agctggaagg gcataatgtg ctggcccatc
    25621 ttggaccgga gccgctcagc gacgatttca atggtgagta tctgcatcag aagtgcgcga
    25681 agaaaaaaac ggcgattaaa ccgtggctga tggataacaa gctggtggta ggggtaggga
    25741 atatctatgc cagcgaatca ctgtttgcgg cggggatcca tccggatcgg ctggcgtcat
    25801 cactgtcgct ggcagagtgt gaattgttag ctcgggtgat taaagcggtg ttgctgcgtt
    25861 cgattgagca gggtggtaca acgctgaaag attttctgca aagtgatggt aaaccgggct
    25921 atttcgcgca ggaattgcag gtttacgggc gaaaaggcga gccgtgtcgg gtgtgcggta
    25981 cgccgattgt ggcgactaaa catgcgcagc gggcaacgtt ttattgtcgg cagtgccaga
    26041 agtaattcat gcgcgccgga tggcatacca tccggcataa acgctacgct aacttcgcca
    26101 tcagcgcctg atggacattc tccggcagga aatgggtgac atcgccctga tggcgcgcca
    26161 cctctttcac caacgatgaa gagataaacg accactcttt cgacggcatc agaaacacac
    26221 tttccagttc cggcattaag tggcgattca tatgcgccag ctgcatttca tattcaaaat
    26281 ccgccaccgc acgcaggcca cgaatcagca ccgtagcgtg ttgattacgg gcgaagttcg
    26341 ccatcaaatc actaaacccg accacttcca cgttccccag atgcgcggtt gcctgctgtg
    26401 ccagcgccac acgctcttcc agggtaaaca tcggtttttt actggggctg gcggcaatcg
    26461 ccagaataac gtgatcgaac atttgcgtgg cgcgcgtcac gatatcgata tgaccattgg
    26521 taatgggatc gaaagtacca ggataaatcg cccgtttttg cataacaacc tcaatgcgtt
    26581 ttcggtggca ggtaaggttc cagcagttga agcagacgct gtagcgcgcc ctggttttga
    26641 tacagtactt caacggcatg acggccatag aaactacggt aatcggcgtc ggtgagtaaa
    26701 gaggacacct cttttgcaag cgtagtggca tcggtaacgg taatcagccc gcttgcctgc
    26761 tccagccgcg cgcaaatgtc tttaaagtta aaagtatgcg gccccatcaa taccggaata
    26821 gcgtgtgcgg cagcttccag cggattatgc ccaccacgtt caaccagtga accgccaaca
    26881 aaggcgagat cggcaatgcc gtacagtaac atcaactcgc ccatcgtatc gccaaccaca
    26941 acctgcgtgc tggtggaggg gacttcccct gaagagcgtg tgatatagct tagtccagcc
    27001 tggcggacaa gattaatcgc atccgggaag cgttctggat gacggggtac caggatgagc
    27061 aataaattcg ggaattgctg taacaatgcc tgatgtgcgg cgatcaccac actctcttcg
    27121 ccttcgtgag tgctggtggc aatccatacc gggcggtgtg gtgcccactg gcggcgcagc
    27181 gtcacggctt tagcagccaa ctgcggcgtt acagaaatat cgaatttcag gctaccggta
    27241 acggtcacct gattattttt tgcgcccagc gccacaaaac gtgcaccatc ttcttcattt
    27301 tgcgcagcaa tcagcgtaat acgacgcagc aagcgacgga cgaatttacc cagtttggca
    27361 taacctgcgg ccgagcgggc agagagtcgc gcgttagcga tcaccagcgg aattttacgt
    27421 ttgtgtagcg ccgcaatcag gttaggccat agttcggttt ccataatcaa caccagtttg
    27481 gggtcgactt tattcaggaa acggttgagc gcatcgggca ggtcatacgg cagataaacg
    27541 tgctgaacat ccttcccgaa agccgattgt acgcgctccg aaccggttgg cgtcatggtt
    27601 gtaacggtaa tcggtaaatc aggataacga tggcgcagcg cgcgcaccaa cgggatcgcc
    27661 gccagagttt caccgacgga gacggagtgc agcataatgc cgcctggttt tagcggatgg
    27721 cggtaaaaac cgtaacgttc accccagcgt tttcgatagg ccggagcctt acgtccgcgc
    27781 acccagagcc gtatccagat cagcggctga ataaggtaga gaagggcggt gtaaagcaat
    27841 tcgagcatag taaatagctg acttatggat gtgctgggga ttctatgtat ttagctgtgg
    27901 ctttaccatt acttttcccg tttttgactt aaatagcaat ttacccgcca attcttgctg
    27961 aacatctata ctttttttgt atttttatgc gattcattga tttctgctgt acgtgcagga
    28021 aggaatcgca gagcaacagt gaaagaatat ggttgctaat gattttattt gattgatttc
    28081 tttattgaaa atcaacaatg tgcttaaaaa tcattcgggt cggattgccg cgaaagaagt
    28141 gatacactag cgcgtcaata tcagtgcggt atcagtattc aggtagctgt tgagcctggg
    28201 gcggtagcgt gctttttctg cttcacctta atcggataat ctcaacaaaa agagttactt
    28261 gtggataagc catttcgaag aattttgctc attaagatgc gttttcatgg ggatatgtta
    28321 ttaactactc ccgtcattag ttcgctgaaa aaaaattacc ctgacgcaaa aatcgatgtg
    28381 ctgctttatc aggacaccat cccgatcctg tctgaaaatc cagagattaa cgcgctctac
    28441 ggcataaaaa ataaaaaagc aaaagcctca gaaaaaattg ccaacttttt tcatctcatc
    28501 aaggtattac gtgccaataa gtatgacctt atcgtcaatc ttaccgatca atggatggtt
    28561 gctatactgg ttcgcttatt aaatgcccgt gtgaaaattt cccaggatta tcatcatcgg
    28621 cagtctgctt tttggcgtaa aagtttcacc catttggtgc cgttgcaggg tggaaatgtg
    28681 gtggaaagta acttatccgt gctgacacca ttgggacttg attcgttggt gaagcagaca
    28741 accatgagtt acccgcctgc aagctggaaa cgtatgcgtc gcgaacttga tcacgctggt
    28801 gttggacaaa attatgtggt tatccaacct acggcgcggc aaatcttcaa atgctgggac
    28861 aacgccaagt tttccgctgt gattgatgcc ttacatgctc gtggttatga agtcgttctg
    28921 acgtccggcc cggataaaga cgatctggcc tgcgtcaatg aaattgcgca gggatgccag
    28981 acgccaccag taacggcgct ggctggaaag gtgaccttcc cggaacttgg tgcgttaatc
    29041 gatcatgcgc agctgtttat tggcgttgat tccgcaccgg cgcatattgc cgctgcagtt
    29101 aatacgccgc tgatatcgct gtttggtgcg acagaccata ttttctggcg tccctggtca
    29161 aataacatga ttcaattctg ggcgggagat taccgggaaa tgccaacgcg cgatcagcgt
    29221 gaccgaaatg agatgtatct ttcggttatt ccggcggcag atgtcattgc tgctgtcgat
    29281 aaattactgc cctcctccac gacaggtacg tcgttatgat cgttgctttt tgtttatata
    29341 aatattttcc ctttggcggt ttgcagcgtg attttatgcg tattgctcag acagtcgccg
    29401 cccgaggtca tcatgttcgg gtttataccc agtcgtggga aggcgaatgc cctgatgtat
    29461 ttgaactgat caaagtgccg gttaaatcgc ataccaatca cgggcgcaat gcggagtatt
    29521 ttgcctgggt gcaaaaacat ttacgcgaac atcccgtcga taaagtcgtt ggattcaaca
    29581 aaatgccggg gctggacgtt tattatgccg ctgatgtttg ttatgccgag aaagtagcgc
    29641 aggaaaaagg ctttttctat cgcctgacgt cacgttatcg ccattatgcc gcctttgagc
    29701 gggcaacctt cgaacagggt aagccgacac agttgctgat gctgacagat aagcaaatcg
    29761 ccgatttcca gaaacattat cagactgaag cggagcgttt tcatattctg ccaccgggga
    29821 tttatcctga tcgtaaatat agccagcagc cagccaatag ccgtgaaatc ttccgtaaga
    29881 agaatggaat aaccgaacaa caatatttat tgttgcaggt cggttcagac ttcacgcgta
    29941 aaggtgtcga tcgttccatt gaagcacttg cttcgttacc ggattcgctg cgccacaaca
    30001 cattgctata tgttgttggg caggataaac cgcgaaaatt tgaggcgctg gcagaaaaac
    30061 gcggcgtgcg cagtaatgtt cactttttct cggggcgcaa tgatgtctcg gaattaatgg
    30121 cggcggcgga tttattactg catcctgcct accaggaagc ggcgggaatt gtgctgctgg
    30181 aagcgattac tgcaggatta ccggtactaa caacagccgt ttgtggctat gcgcattata
    30241 ttgtcgacgc caattgcggc gaggctattg ctgagccatt ccgccaggaa acattgaatg
    30301 agattttacg caaagcgtta acgcaatctt cattgcgcca ggcctgggcg gaaaatgcgc
    30361 gacattatgc tgatacacaa gatttataca gtctgccaga gaaagcggcg gatatcataa
    30421 cgggtggtct ggatggttga acttaaagag ccgtttgcca cgttatggcg cggcaaagat
    30481 ccttttgagg aagttaaaac cttgcagggt gaggtatttc gtgaactgga aactcgccgt
    30541 actctgcgct ttgaaatggc gggcaaaagc tattttctca aatggcatcg cggcacgacc
    30601 ctgaaagaga taatcaaaaa tttactctca ttgcggatgc cagtattagg cgcagaccgc
    30661 gaatggaatg cgattcatcg actgcgggat gtcggcgttg atactatgta tggggtggca
    30721 ttcggcgaaa aaggcatgaa tccgctgacc agaacctcgt ttattattac cgaagatctg
    30781 acaccaacca taagtctgga agattactgt gctgactggg cgactaaccc tccagatgtt
    30841 cgcgtaaagc gtatgcttat taagcgtgtc gcgacgatgg tgcgcgatat gcatgctgcg
    30901 ggcattaacc accgtgactg ttatatctgt catttcctgc tgcacttgcc tttttccggt
    30961 aaggaagagg agttaaaaat ttcggtaatt gacctgcacc gggcgcagct tcgcacgcgc
    31021 gttccacgtc gttggcggga taaagatctt attgggcttt atttttcttc gatgaatatc
    31081 ggcctgactc agcgggatat ctggcggttt atgaaagtgt attttgccgc cccgcttaaa
    31141 gacattctca agcaggaaca aggactgctg tcgcaagcag aagcaaaagc cacaaaaatc
    31201 agggaaagaa cgattcgaaa atcgttgtaa tttccggaga gaaatatgag tgcccactat
    31261 tttaatccac aagagatgat cactaagaca atcatcttcg atgaaaggcc agcggcgtca
    31321 gtggcatcat cattccatgt tgcttatggc attgataaaa actttctttt tggttgtggt
    31381 gtttcaatca cgtcagtttt gttacataac aacgacgtga gttttgtttt ccacgttttt
    31441 attgatgata tccctgaagc cgatatccag cgtttagccc aattggcgaa aagctatcgt
    31501 acctgtatcc agatccatct ggtaaattgt gaacggctta aggcattacc gacgaccaaa
    31561 aattggtcta ttgccatgta tttccgtttt gtaattgcag attactttat tgatcaacaa
    31621 gataaggttc tttacctgga tgctgatatc gcctgtcagg gaaacttaaa gccgctgata
    31681 acaatggatc ttgccaataa cattgttgct gttgttactg aacgcgatgc taactggtgg
    31741 tcgttacggg gtcaaagtct gcagtgtaat gaacttgaaa agggttactt taattcaggt
    31801 gtcctgttaa ttaatacact agcgtgggcg caggagtccg tttctgctaa agcgatgtcg
    31861 atgcttgctg ataaagccgt cgtttcccgt ttaacctata tggatcaaga tatacttaat
    31921 cttatcctgt cagggaaag
//
LOCUS       DAPGWB010000037        31636 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.037, whole genome shotgun sequence.
ACCESSION   DAPGWB010000037 DAPGWB010000000
VERSION     DAPGWB010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 31636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31636
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.037"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(205..1578)
                     /gene="argH"
                     /locus_tag="RHX79_001684"
     CDS             complement(205..1578)
                     /gene="argH"
                     /locus_tag="RHX79_001684"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDV2196871.1"
                     /translation="MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKAL
                     VTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKK
                     LHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRA
                     QPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGF
                     ASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSG
                     SSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDT
                     WLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VEAIRQGKPLEDLPLDELQKFSPVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIA
                     FAQARLE"
     gene            complement(1639..2415)
                     /gene="argB"
                     /locus_tag="RHX79_001685"
     CDS             complement(1639..2415)
                     /gene="argB"
                     /locus_tag="RHX79_001685"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418394.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDV2196872.1"
                     /translation="MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGG
                     GCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGL
                     FLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVN
                     ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKV
                     NAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA"
     gene            complement(2423..3427)
                     /gene="argC"
                     /locus_tag="RHX79_001686"
     CDS             complement(2423..3427)
                     /gene="argC"
                     /locus_tag="RHX79_001686"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDV2196873.1"
                     /translation="MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKL
                     ISDLHPQLKGIVDLPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDL
                     SGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQ
                     LALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEI
                     ATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKG
                     VPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI
                     "
     gene            3581..4732
                     /gene="argE"
                     /locus_tag="RHX79_001687"
     CDS             3581..4732
                     /gene="argE"
                     /locus_tag="RHX79_001687"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HDV2196874.1"
                     /translation="MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFK
                     DLGFNVEVQPVPGTRNKFNMLASCGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHD
                     GKLYGLGTADMKGFFAFILDALRDVDVTKLKKPLYILATADEETSMAGARYFAETTAL
                     RPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQ
                     LRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNELNG
                     LLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEA
                     PFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELITQVIHHFCWH"
     gene            5084..7735
                     /gene="ppc"
                     /locus_tag="RHX79_001688"
     CDS             5084..7735
                     /gene="ppc"
                     /locus_tag="RHX79_001688"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004203687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HDV2196875.1"
                     /translation="MNEQYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKS
                     SRAGNDANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPE
                     VIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQ
                     LDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVP
                     NYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKAT
                     DLFLKDIQVLVSELSMVEATPELLALVGEEGAAEPYRYLMKNLRSRLMATQAWLEARL
                     KGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFGVPLVR
                     IDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAE
                     TREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETL
                     DDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIK
                     TCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLP
                     EITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDLYRGYVRENKDFVPYF
                     RSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQK
                     VVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKEL
                     RNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKE
                     GQEPDPRVEQALMVTIAGIAAGMRNTG"
     gene            7918..9651
                     /locus_tag="RHX79_001689"
     CDS             7918..9651
                     /locus_tag="RHX79_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase CptA"
                     /protein_id="HDV2196876.1"
                     /translation="MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTN
                     GIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLF
                     VMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALL
                     YGLILHPIAMNTFIKNKPFEKTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNE
                     NNALPPLANFKDESGNEPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLT
                     VFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMT
                     ARNTMLTVFSKQTDKQFYMNQQRTQSAREYDTNVLKPFQEVLKDPAPKKLIIVHLLGT
                     HIKYKYRYPENQGKFDGNTDHVPPGLNAEELESYNDYDNANLYNDHVVASLIKDFKAA
                     NPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFLLWTSEKWQATHPRDFS
                     QDVDRKYSLAELIHTWSDLAGLSYDGYDPTRSVVNPQFKETTRWIGNPYKKNALIDYD
                     TLPYGDQVGNQ"
     gene            9800..10651
                     /locus_tag="RHX79_001690"
     CDS             9800..10651
                     /locus_tag="RHX79_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2196877.1"
                     /translation="MYHDVSYLLSRLINGPLSLRQIYFASSNGPAPDLAYQVDFPRLE
                     IVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWD
                     GKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ
                     IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL
                     NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT
                     EKPTTPE"
     gene            complement(10638..10979)
                     /locus_tag="RHX79_001691"
     CDS             complement(10638..10979)
                     /locus_tag="RHX79_001691"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HDV2196878.1"
                     /translation="MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALG
                     TENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVL
                     SAPQQTHLILE"
     gene            complement(10981..11859)
                     /locus_tag="RHX79_001692"
     CDS             complement(10981..11859)
                     /locus_tag="RHX79_001692"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418387.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[formate-C-acetyltransferase]-activating enzyme"
                     /protein_id="HDV2196879.1"
                     /translation="MTSSAGQRISCNVVETRRDDVARIFNIQRYSLNDGEGIRTVVFF
                     KGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDA
                     LEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPAS
                     KLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPG
                     FTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKEVSAPSSADVAT
                     MREMAERAGFQVTVGG"
     gene            complement(11825..14122)
                     /locus_tag="RHX79_001693"
     CDS             complement(11825..14122)
                     /locus_tag="RHX79_001693"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HDV2196880.1"
                     /translation="MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRA
                     KATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFA
                     ISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATSTQIFSINQTDKGQGHIIID
                     YPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAELAETMAANCT
                     DAQRREELLTIAEISRHNAEHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYM
                     LPFYQASLTQGEDPAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLT
                     ENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRLGTGIPQIF
                     NDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHEN
                     EGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGR
                     DITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEGE
                     KVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVP
                     LGSVVGATPDGRFAGEQLADGGLSPMLGQDAQGPTAVLKSVSKLDNTLLSNGTLLNVK
                     FTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLREAQQRPQDYAGLVVRVA
                     GYSAFFVELSKEIQDDIIRRTAHQL"
     gene            complement(14173..14493)
                     /locus_tag="RHX79_001694"
     CDS             complement(14173..14493)
                     /locus_tag="RHX79_001694"
                     /EC_number="2.7.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HDV2196881.1"
                     /translation="MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIG
                     LENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHL
                     AQTA"
     gene            complement(14508..15587)
                     /locus_tag="RHX79_001695"
     CDS             complement(14508..15587)
                     /locus_tag="RHX79_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit EIIC"
                     /protein_id="HDV2196882.1"
                     /translation="MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGA
                     VPDAVADPNLKKLFDIGVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAG
                     FFGALIAGIIGGIVVHYLKKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGA
                     LTNSLTQWLQGMQQGSIVMLAVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVAI
                     AAVGICIPPLGMGLATLIGRKNFSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVI
                     PSIMVGSVCGAVTAALVGAQCYAGWGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVL
                     KSLARKNGSSTDEKEDDLDLDFEIN"
     gene            15896..18397
                     /gene="ptsP"
                     /locus_tag="RHX79_001696"
     CDS             15896..18397
                     /gene="ptsP"
                     /locus_tag="RHX79_001696"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HDV2196883.1"
                     /translation="MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRK
                     GNAKSALALIGTDTLAGDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDE
                     LEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALGNLPAAKGVDAEQSALE
                     NGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLREHLLAGVSAGLSCAEAIVTS
                     ANHFCEEFARSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELT
                     PSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQHQTIYIDG
                     NAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVE
                     AQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGG
                     DKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSM
                     EEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSN
                     DLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVL
                     PLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRKLLNQAMACRTSLEVEHLLAQFRM
                     TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFST
                     GLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIF
                     SRLARRIMHEEFRNALVNAASADAIASLLQHELEL"
     gene            18409..19071
                     /gene="fsa"
                     /locus_tag="RHX79_001697"
     CDS             18409..19071
                     /gene="fsa"
                     /locus_tag="RHX79_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HDV2196884.1"
                     /translation="MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLP
                     RLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKMLKKE
                     GITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQALLEMHAPES
                     MVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTT
                     HL"
     gene            19082..20185
                     /gene="gldA"
                     /locus_tag="RHX79_001698"
     CDS             19082..20185
                     /gene="gldA"
                     /locus_tag="RHX79_001698"
                     /EC_number="1.1.1.6"
                     /EC_number="1.1.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional L-1,2-propanediol
                     dehydrogenase/glycerol dehydrogenase"
                     /protein_id="HDV2196885.1"
                     /translation="MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFA
                     QSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKA
                     LAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGA
                     PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAM
                     LAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVA
                     FGTLTQLVLENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGE
                     TIHNMPGGATPDQVYAALLVADQYGQRFLQEWE"
     gene            20460..21077
                     /locus_tag="RHX79_001699"
     CDS             20460..21077
                     /locus_tag="RHX79_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1287 domain-containing protein"
                     /protein_id="HDV2196886.1"
                     /translation="MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGAR
                     QQIGSTLFYDPAYMQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFA
                     EYPQKWQLKRPDSNIDHRRVPNLETWFTRHDKTRPISKNPSDYQAGDIVSWRLDNGLA
                     HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWRMVGHYRYFVK"
     gene            complement(21104..22009)
                     /gene="yijE"
                     /locus_tag="RHX79_001700"
     CDS             complement(21104..22009)
                     /gene="yijE"
                     /locus_tag="RHX79_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418378.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine transporter YijE"
                     /protein_id="HDV2196887.1"
                     /translation="MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTAL
                     RCIFGALVLFIVLLLRGRGMRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAIL
                     SYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILS
                     GVSWGASAIVAKRLYTRHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFW
                     ALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGS
                     GIVLIVLALALVSRKKKEAVSVKSI"
     gene            complement(22103..24283)
                     /gene="katG"
                     /locus_tag="RHX79_001701"
     CDS             complement(22103..24283)
                     /gene="katG"
                     /locus_tag="RHX79_001701"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HDV2196888.1"
                     /translation="MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVD
                     LLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIR
                     MAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA
                     DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLG
                     ATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAG
                     PTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLF
                     KYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRR
                     FLNDPQAFNEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDI
                     IDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVR
                     ALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDI
                     EMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFD
                     GSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKYTASRADL
                     VFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLDRFDLL"
     gene            complement(24612..25502)
                     /gene="metF"
                     /locus_tag="RHX79_001702"
     CDS             complement(24612..25502)
                     /gene="metF"
                     /locus_tag="RHX79_001702"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HDV2196889.1"
                     /translation="MSFFHASQRDALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNS
                     IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTI
                     ARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAK
                     SAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFK
                     QAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYT
                     LNRAEMSYAICHTLGVRPGL"
     gene            complement(25851..28283)
                     /gene="metL"
                     /locus_tag="RHX79_001703"
     CDS             complement(25851..28283)
                     /gene="metL"
                     /locus_tag="RHX79_001703"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase II"
                     /protein_id="HDV2196890.1"
                     /translation="MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDM
                     MVVSAAGSTTNQLINWLKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAF
                     VSDLERLAALLDSGINDAVYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAE
                     RAAQPQVDEGLSYPLLQQLLVQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIG
                     ALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPV
                     SGSEIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDVCLIEFQVPASQDFKLAH
                     KEIDQILKRAQVRPLAVGVHNDRQLLQFCYTSEVADSALKILDEAGLPGELRLRQGLA
                     LVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSDDGISLVAVLRTGPTESLIQGLHQ
                     SVFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYD
                     GLDASRALAFFNDEAVEQDEESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGF
                     HVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTIL
                     SISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAR
                     EAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVA
                     RFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA
                     IQSDINRLAQLL"
     gene            complement(28286..29446)
                     /gene="metB"
                     /locus_tag="RHX79_001704"
     CDS             complement(28286..29446)
                     /gene="metB"
                     /locus_tag="RHX79_001704"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HDV2196891.1"
                     /translation="MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAH
                     DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYG
                     GSYRLFDSLAKRGCYRVLFVDQGDEQALRAALADKPKLVLVESPSNPLLRVVDIAKIC
                     HLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDV
                     VTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLY
                     HPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLI
                     SHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG"
     gene            29723..30040
                     /gene="metJ"
                     /locus_tag="RHX79_001705"
     CDS             29723..30040
                     /gene="metJ"
                     /locus_tag="RHX79_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015855437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HDV2196892.1"
                     /translation="MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRR
                     QVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPET
                     WEY"
     gene            30100..30708
                     /locus_tag="RHX79_001706"
     CDS             30100..30708
                     /locus_tag="RHX79_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiX family permuted papain-like enzyme"
                     /protein_id="HDV2196893.1"
                     /translation="MKIRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATH
                     SDYSHTGMLVMRNKKPYVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQK
                     LAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
                     QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW"
     gene            30853..31528
                     /locus_tag="RHX79_001707"
                     /pseudo
     CDS             30853..31528
                     /locus_tag="RHX79_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT         7623 a         8806 c         8045 g         7162 t
ORIGIN      
        1 tttatgggga gtgtgaaggt aaagaagaca caatgataaa aaggaatgtg acaaataatg
       61 gttctggttg ggcgttaaat ttaagctcac cagaatgctg acaaatttct gcctgatgtg
      121 gcgtaaacgc cttatccgcc tacgaagtgt cgcactttgt aggcgtggta agctccccat
      181 tttcagggga gcaatataaa caaattactc taaccgcgcc tgcgcaaaag caattgcctg
      241 cgccacctgc tgcggtgaga cgccgccttt tgccgcacgc ttgtcgaggc acgattgcag
      301 cgacagaatc ggatagacat cttcgtcaat caccgggctg aatttctgca actcgtcgag
      361 cggcagatct tccagcggtt tgccctgacg aatggcttcc accaccgctt caccaacaat
      421 atggtgcgcc tcgcggaacg gtacgccttt cgccaccaga taatccgcca gttcggtggc
      481 gttggcgtaa ccctgctgag ccgcttcctg gcaacgtgga cgtttcacct gaatgccgtc
      541 cagcaccagc gccgccatat gcaggcagtc cagccaggta tcgagcgcgt cgaacagacc
      601 ttctttgtct tcctgcatat ctttgttgta agccagcggc aaacctttca gcgtcatcat
      661 catgccggtt aacgccccct gcacccgacc gcatttaccg cgaatcagct ccagcgcatc
      721 cgggtttttc ttctgcggca ttaatgatga accggaagtc acgcggtcag aaagctccac
      781 aaaccccgct tcgccggtgt taaagaaaat cagatcttca gcaaaacgcg acagatgcac
      841 catgccgata gcggcagcag aaagcagttc caacacatgg tcacggtcag aaacgctgtc
      901 gagactgtta cgggtcgccg aagcaaagcc cagccagcct gctaactgtt cacggtcgat
      961 ttcataggcc gttcccgcca gcgcgccaca gcctagcggg ctgacatcca gacgcttaag
     1021 cgcatcctgc aaacggcttt catcacgcgc cagcatctca acataggcca ggcaccagtg
     1081 cgcgaacgtc accggctggg cgcgttgcag gtgagtgtaa cctggcatta ccgcgtcctg
     1141 attgttttgt gcggtttcca ccagcgccga ttgcagctgc cggttagccg tcagtaactc
     1201 gctaacggta tctttgcacc acagtttcag gtcagtcgct acctgatcat tacggctacg
     1261 cccggtatgc agctttttgc ctaactggcc cactttgtcg atcagtttgc cttccaccca
     1321 gctatggata tcttcggcgt cgctttcaag gatttgttgt ggcctggcgc gaacatcttc
     1381 cagcaacacg ttcagcgcct cttccagttg cgcctgctct tctgcggtta acacgcctac
     1441 cgtgaccagg gctttggacc aggccacaga gccaacaata tcctgctccg ccagacggta
     1501 atcaaagcgc agtgagtcgt tgaattgttt gaaccgttga tctgctgcct gggtaaaacg
     1561 cccgccccaa agtgccataa ctctgtttcc ttattttgaa attcaatgcc ggaaagctgc
     1621 gcctccggcc aacaaaactt aagctaaaat ccgcgtaccc atcggcatac cgttaaacag
     1681 tgccggaagc tgctccgcat gacgccagga ggcgatatct accggacggc ccagcgtgcg
     1741 ggccgcatcc agcgccgcgt tcactttcac tatcatgccg tcagtaataa tgccctgctc
     1801 aatcagttgt tctgctttcg cggcggtcat ttcggcaatg cgttgccctt tgccgtcgag
     1861 aatgccgctg acgtcggaga gcaaaatcag atccgcgccc agcgttgccg ccagcgccgt
     1921 tgccgcctgg tcggcattga cgttcatcag ttgcccttcg tctgttacgc caatggagct
     1981 gaccaccggc agataaccgt tctccagcaa ggagttgata agcttaggcg aacctggctg
     2041 cgccagtcca acatgaccta actcttcatc aagctgggtc actttgacgc tgtcgccgtc
     2101 accgagaaac aaacctacgg ccgcaatctg atgtttcttc gcccatgcca acagggtttt
     2161 atttgccgtt cccgccagtg ctccggtgat aatgtctatc tgatcagcag gcgtcacccg
     2221 caggccgttt ttctttttca ccggcagatt cagccctttc atcagctcat ccaccacgca
     2281 accgccgccg tgcacaatca ccagcggacg ctgatgtgac tcacgataat tcaccagtgc
     2341 gctaaacaga cgttccagcg cctcttcact atccagcagt acgccgccca gtttgataat
     2401 taatggattc atcattgcac ccttaaataa gagactgcgt ttccgcatag ccgaaacgaa
     2461 tattggcgca ctgtaccgct tgtgccgccg cgcctttcag taagttgtct tcggtcgcca
     2521 caataatcag atgctcgccc tgaacggcaa acccgatatc gcaaaatggc agcccaacga
     2581 catttttcag cgccggaacg cctttgtcat acagccgcac cagcggttta tgggcatacg
     2641 cctgctgtaa cacttgcgcg acttgcgcct gggtcacacc cgatttcagg cggcaggtaa
     2701 tggtttcgag aatgccgcgc gggaaattgc ccagatgtgg ggtgaagata acgtcagcac
     2761 cgaggtgtgt ggcgatctct ggttgatggc gatgagtaaa gacgccatac ggttgcaggc
     2821 taacttcaca aaagctgttt gaaatggccg ctttacgccc tgcaccgctc acgccgctgg
     2881 tggcgttgat caccggccac tgattgaggt caagaagatc ggcatcaatc aacggtttca
     2941 gcgccagctg tgccgccgtc ggataacagc ccggcaccgc aatcaaattc gcttctttta
     3001 atttattacc gcaccactcc gccagaccgt aggctgcctg ttccaacagt tccgggtatt
     3061 gatgggtaaa gccgtaatat ttttcataga aggtggcgtc gttaacacga aacgcgccgg
     3121 aaaggtcgaa caccacgcag cccgcttcaa gaaactgcgg cgctaaatcg tggctaactt
     3181 catgggcggt ggcgagaaac actacgtcca cccctgggct aaactcgctg atatccgaca
     3241 tcggctgcaa cggcagatca acgatgcctt ttagctgcgg atgcaaatcg gagattaact
     3301 ttcccgcatc attgctttgc gctgaaacag tcaaagcggt tatgttcata tgcggatggc
     3361 gatttacata ggtcactagc tctgcgccag cgtagccgct ggcacccaca atcagcgtat
     3421 tcaacatcgg ggctattcac cttcttatgt ctggttgcca ggttaaacgt aaaacattca
     3481 ccttacggct ggtgggtttt attacgctca acgttagtgt atttttattc ataaatactg
     3541 catgaatatt gatactatca tgaccagagg tgtgtcaaca atgaaaaaca aattaccgcc
     3601 atttatcgag atttaccgcg ctctgattgc cacaccttca ataagcgcca cggaagaggc
     3661 actcgatcaa agcaatgcag atttaatcac tctgctggcg gactggttta aagatttggg
     3721 cttcaatgtg gaagtgcagc ctgttccagg aactcgcaac aaatttaata tgctggccag
     3781 ttgcggacag ggggctggcg gcttgttgct ggcggggcat accgatacgg tgccatttga
     3841 tgacggtcgc tggacgcgcg atccgtttac actgacggag catgacggca agctttacgg
     3901 cttaggcacc gccgacatga aaggcttttt tgcgtttatc cttgatgcgc tacgcgatgt
     3961 cgacgtcacg aaactgaaaa aaccgctcta cattctggcg actgctgatg aagaaaccag
     4021 tatggccgga gcgcgttatt ttgccgaaac taccgccctg cgcccggatt gcgccatcat
     4081 tggcgaaccg acgtcactac aaccggtacg cgcacataaa ggtcatatct ctaacgccat
     4141 ccgtattcag ggccagtcgg ggcactccag cgatccagca cgcggagtta acgctatcga
     4201 actaatgcac gacgccatcg ggcatatttt gcaattgcgc gataacctga aagaacgtta
     4261 tcactacgaa gcgtttaccg tgccataccc tacgctcaac ctcgggcata ttcacggtgg
     4321 cgacgcttct aaccgtattt gcgcttgctg tgagttgcat atggatattc gtccgctgcc
     4381 tggcatgaca ctcaatgaac ttaatggttt gctcaacgat gcattggctc cggtgagcga
     4441 acgctggccg ggtcgtctga cggtcgacga gctgcatccg ccgatccctg gctatgaatg
     4501 cccaccgaat catcaactgg ttgaagtagt tgagaaattg ctcggagcaa agaccgaagt
     4561 ggtgaactac tgtaccgaag cgccgtttat tcaaacgtta tgcccgacgc tggtgttggg
     4621 gcctggctca attaatcagg ctcatcaacc tgatgaatat ctggaaacac ggtttatcaa
     4681 gcccacccgc gaactgataa cccaggtaat tcaccatttt tgctggcatt aaaacgtagg
     4741 ccggataagg cgctcgcgcc gcatccggca ctgttgtcaa actccagtgc cgcaataatg
     4801 tcggatgcga tacttgcgca tcttatccga cctacacctt tggtgttact tggggcgatt
     4861 ttttaacatt tccataagtt acgcttattt aaagcgtcgt gaatttaatg acgtaaattc
     4921 ctgctattta ttcgtttgct gaagcgattt cgcagcattt gacgtcaccg cttttacgtg
     4981 gctttataaa agacgacgaa aagcaaagcc cgagcatatt cgcgccaatg cgacgtgaag
     5041 gatacagggc tatcaaacga taagatgggg tgtctggggt aatatgaacg aacaatattc
     5101 cgcattgcgt agtaatgtca gtatgctcgg caaagtgctg ggagaaacca tcaaggatgc
     5161 gttgggagaa cacattcttg aacgcgtaga aactatccgt aagttgtcca aatcttcacg
     5221 cgctggcaat gatgctaacc gccaggagtt actcaccacc ttacaaaatt tgtcgaacga
     5281 cgagctgctg cccgttgcgc gtgcgtttag tcagttcctg aacctggcca acaccgccga
     5341 gcaataccac agcatttcgc cgaaaggcga agctgccagc aacccggaag tgatcgcccg
     5401 caccctgcgt aaactgaaaa accagccgga actgagcgaa gacaccatca aaaaagcagt
     5461 ggaatcgctg tcgctggaac tggtcctcac ggctcaccct accgaaatta cccgtcgtac
     5521 actgatccac aaaatggtgg aagtgaacgc ctgcttaaaa cagctcgata acaaagatat
     5581 cgctgactac gaacacaacc agctgatgcg tcgcctgcgc cagttaatcg cccagtcatg
     5641 gcataccgat gaaatccgta agctgcgtcc aagcccggta gatgaagcca aatggggctt
     5701 tgccgtagtg gaaaacagcc tgtggcaagg cgtaccaaat tacctgcgcg aactgaacga
     5761 acaactggaa gagaacctcg gctacaaact gcccgtcgaa tttgttccgg tccgttttac
     5821 ttcgtggatg ggcggcgacc gcgacggcaa cccgaacgtc actgccgata tcacccgcca
     5881 cgtcctgcta ctcagccgct ggaaagccac cgatttgttc ctgaaagata ttcaggtgct
     5941 ggtttctgaa ctgtcgatgg ttgaagcgac ccctgaactg ctggcgctgg ttggcgaaga
     6001 aggtgccgca gaaccgtatc gctatctgat gaaaaacctg cgttctcgcc tgatggcgac
     6061 acaggcatgg ctggaagcgc gcctgaaagg cgaagaactg ccaaaaccag aagggctgct
     6121 gacacaaaac gaagaactgt gggaaccgct ctacgcttgc taccagtcac ttcaggcgtg
     6181 tggcatgggt attatcgcca acggcgatct gctcgacacc ctgcgccgcg tgaaatgttt
     6241 cggcgtaccg ctggtccgta ttgatatccg tcaggagagc acccgccata ccgaagcgct
     6301 gggcgagctg acccgctacc tcggtatcgg cgactacgaa agctggtcag aggccgacaa
     6361 acaggcgttc ctgatccgcg aactgaactc caaacgtccg cttctgccgc gcaactggca
     6421 accaagcgcc gaaacgcgcg aagtgctcga tacctgccag gtgattgccg aagcgccgca
     6481 aggctccatt gccgcctacg tgatctcgat ggcgaaaacg ccgtccgacg tactggctgt
     6541 ccacctgctg ctgaaagaag cgggtatcgg gtttgcgatg ccggttgctc cgctgtttga
     6601 aaccctcgat gatctgaaca acgccaacga tgtcatgacc cagctgctca atattgactg
     6661 gtatcgtggc ctgattcagg gcaaacagat ggtgatgatt ggctattccg actcagcaaa
     6721 agatgcggga gtgatggcag cttcctgggc gcaatatcag gcacaggatg cattaatcaa
     6781 aacctgcgaa aaagcgggta ttgagctgac gttgttccac ggtcgcggcg gttccattgg
     6841 tcgcggcggc gcacctgctc atgcggcgct gctgtcacaa ccgccaggaa gcctgaaagg
     6901 tggcctgcgc gtgactgaac agggcgagat gatccgcttt aaatatggtc tgccagaaat
     6961 caccgtcagc agcctgtcgc tgtacaccgg ggcgattctg gaagccaacc tgctgccacc
     7021 acctgagccg aaagagagct ggcgtcgcat tatggatgaa ctgtcagtca tctcctgcga
     7081 tctctaccgt ggctacgtac gtgaaaacaa agattttgtg ccttacttcc gctccgctac
     7141 gccggaacaa gaattgggca aactgccgtt gggttcacgt ccggcgaaac gtcgcccaac
     7201 cggcggcgtc gagtcgctgc gcgccatacc gtggattttt gcctggacgc aaaaccgcct
     7261 gatgctcccc gcctggctgg gtgcaggtac ggcgctgcaa aaagtggtcg aagatggcaa
     7321 acagagcgag ctggaagcca tgtgccgcga ttggccattc ttctcgacgc gtctcggcat
     7381 gctggagatg gtcttcgcca aagcagacct gtggctggcg gaatactatg accaacgcct
     7441 ggtagacaaa gcactgtggc cgttaggtaa agagttacgc aacctgcaag aagaagacat
     7501 caaagtggtg ctggcgattg ccaacgattc ccatctaatg gccgatctgc cgtggattgc
     7561 agagtctatt cagctacgga atatttacac cgacccgctg aacgtattgc aggccgagtt
     7621 actgcaccgc tcccgccagg cagaaaaaga aggccaggaa ccggatcctc gcgtcgaaca
     7681 agcgttaatg gtcactattg ccgggattgc ggcaggtatg cgtaataccg gctaatcttc
     7741 ctcttctgca aaccctcgtg cttttgcgcg agggttttct gaaatacttc tgttctaaca
     7801 ccctcgtttt caatatattt ctgtctgcat tttattcaaa ttctgaatat accttcagat
     7861 atccttaagg aattgtcgtt acattcggcg atattttttt caagacaggt tcttactatg
     7921 cattccacag aagtccaggc taaacccctt tttagctgga aagccctggg ttgggcactg
     7981 ctctactttt ggtttttctc tactctgcta caggccatta tttacatcag tggttatagt
     8041 ggcaccaacg gcattcgcga ctcgctgtta ttcagctcgc tgtggttgat cccggtattc
     8101 ctctttccga agcggattaa aattattgcc gcagtaatcg gcgtggtgct atgggcggcc
     8161 tctctggcgg cgctatgcta ctacgtcatc tacgggcagg agttctcgca gagcgttctg
     8221 tttgtgatgt tcgaaaccaa caccaacgaa gccagcgagt atttaagcca gtatttcagc
     8281 ctgaaaattg tgcttatcgc gctggcctat acggcggtgg cagttctgct gtggacacgc
     8341 ctgcgcccgg tctatattcc aaagccgtgg cgttatgttg tctcttttgc cctgctttat
     8401 ggcttgattc tgcatccgat cgccatgaat acgtttatca aaaacaagcc gtttgagaaa
     8461 acgttggata acctggcctc gcgtatggag cctgccgcac cgtggcaatt cctgaccggc
     8521 tattatcagt atcgtcagca actaaactcg ctaacaaagt tactgaatga aaataatgcc
     8581 ttgccgccac tggctaattt caaagatgaa tcgggtaacg aaccgcgcac tttagtgctg
     8641 gtgattggcg agtcgaccca gcgcggacgc atgagtctgt acggttatcc gcgtgaaacc
     8701 acgccggagc tggatgcgct gcataaaacc gatccgaatc tgaccgtgtt taataacgta
     8761 gttacgtctc gtccgtacac cattgaaatc ctgcaacagg cgctgacctt tgccaatgaa
     8821 aagaacccgg atctgtatct gacgcagccg tcgctgatga acatgatgaa acaggcaggt
     8881 tataaaacct tctggatcac caaccagcag acgatgaccg cccgcaatac catgctgacg
     8941 gtattttcga agcagaccga caaacagttc tatatgaacc agcaacgtac gcagagtgcg
     9001 cgtgaatacg acaccaacgt gctgaaacca ttccaggaag tgctgaagga cccggcgccg
     9061 aagaaactga tcatcgttca tctgctgggt acgcatatca aatacaaata ccgctacccg
     9121 gaaaatcagg gcaagtttga tggcaatacc gatcatgttc cgcctggatt aaacgcggaa
     9181 gagctggagt catataacga ttatgacaac gctaacctgt ataacgatca tgtggttgcc
     9241 agcctgatta aagactttaa agcagcaaac ccgaacggtt tcctggttta tttctctgac
     9301 cacggtgaag aggtttacga cacgccgccg cacaaaactc aggggcgtaa cgaagacaac
     9361 ccgacgcgcc acatgtacac cattccgttc ctgctgtgga cgtcggaaaa atggcaagcg
     9421 actcatccgc gtgatttctc gcaggatgtt gatcgtaaat acagcctggc ggaactgatc
     9481 cacacctggt cagatttagc aggcttatct tacgacggtt acgatccaac ccgttcagtg
     9541 gtgaatccgc agttcaaaga aactacccgc tggattggta acccgtacaa gaaaaacgcg
     9601 ctgatcgatt acgacacgct gccgtatggc gatcaggtgg gtaatcagta aatgaccttt
     9661 gtatcgcgtc tggcgctatt tgccggatgc gatactgccg caatgtttac atcgaactcc
     9721 cctcaggcca cacttttcag gtggcctttt ttaataatgc cagttactgt tttcccgtct
     9781 acatacctaa gggaataaca tgtatcacga cgtcagctat ctgctctccc gcctgatcaa
     9841 cggcccgctg tccctgcgcc agatttactt tgccagcagt aacggtccgg cgcccgatct
     9901 tgcgtatcag gtcgattttc caaggctgga aatagtgctg gaaggtgagt ttgttgatac
     9961 cggcgctgga gcaacgttag ttcccggcga tgtgctgtac gttcccgctg gtggctggaa
    10021 ttttccacaa tggcaagccc ccgctactac ctttagcgtg ctgtttggca aacagcaact
    10081 cggcttcagc gtcgtgcaat gggatggcaa acagtatcaa aatctggcga agcaacacgt
    10141 cgcccgacgc ggcccgcgca ttggttcttt tctgctacaa acgctcaatg aaatgcaaat
    10201 gcagccacag gagcagcaaa cggcaaggct tatcgtcgcc agcctgctta gccactgccg
    10261 cgatttgctc ggcagccaaa tacagaccgc ctcacgcagc caggctctat tcgaagctat
    10321 tcgtgattat atcgacgaac gctatgcctc cgcgcttacc cgcgaatctg tcgcacaggc
    10381 gttctatatt tcaccaaact atctctcgca cctgtttcaa aagacggggg ccattggttt
    10441 taacgaatac ctgaatcaca cgcgactgga gcacgctaag acgttattga aaggctatga
    10501 cctgaaggta aaagaagtgg cgcacgcctg cggctttgtc gacagcaact acttctgccg
    10561 tctgtttcgt aaaaacaccg aacgctcgcc gtcggaatat cgtcggcagt accacagcca
    10621 actgacagaa aaaccgacta ctccagaata agatgggttt gctgcggcgc agaaagcact
    10681 ttacgtaccg cgctcatcac ccgctgcggc tcacgcagga acgcgtagat actgcattgc
    10741 acgtagcgac aatgttcaaa tcgctcggca ccagcaagct cgatatccgt aatcaacagc
    10801 gcaacatccg cccggcggat atcctcgtcc gctaaacgat tctccgttcc cagcgcgccc
    10861 tgagtttcaa tgctgacgcc ccacttctct aactggcaca acttttccag ccgttccgcc
    10921 gccatataag tatgcgccac gccactgacg caggcggtta ctgccaccag gtatgccatt
    10981 ttaacctccc acggtaacct gaaatccggc ccgttctgcc atttcgcgca tcgttgccac
    11041 atcggctgac gacggcgcag aaacctcttt catcgaccat gttttcccca gcagacggta
    11101 tttcggttcg ccgtactgat gaaacggtaa cagatggatc tgcctgatat tcagcgggat
    11161 cagcacgtcc agcgcctgct gcatattctc ccggctgagt gtgaaaccgg ggatcagcgg
    11221 caaacgcggg atcacgttga caccttcact caccagcaaa cgcagattct ccagcacgcg
    11281 tggcaggttc atcttcacca catcccgcgc ctgagtcgcg tccataattt ttaaatcgaa
    11341 caacacttca tcgcacaatt tcgccagcgg taacagcttg ctggctggcg cgtctccggc
    11401 agtttcgatg gcgcatgaca cgccccacag ccgcagtcgc tgtaaaaaac gggtagcaaa
    11461 ctcggcctgc attaacactt cgccgccaga aagcgtgacg ccgccgccgg acgtgcgaaa
    11521 gaaaatgtca tctttcatca cttcccgttc cagagcgtca aggctgatat cgcgaccaat
    11581 ccgttcaaac gcaccggagg ggcattcatc cgcatcacgc aaacatttcg cacagtgcag
    11641 acatttcgcc tctctgcgta ccgtctggat tttgccggag atcgactccg gattagcaca
    11701 ccacgggcaa agatgcggac agcctttaaa aaagaccacc gtacgaatgc cctcgccgtc
    11761 attcagtgaa taacgctgaa tgttgaaaat gcgcgccaca tcatcgcggc gcgtttccac
    11821 aacgttacag ctgatgcgct gtccggcgga tgatgtcatc ctggatctcc ttcgacagtt
    11881 cgacaaagaa ggcgctgtat ccggcaacgc gcaccaccag cccggcataa tcttgtgggc
    11941 gctgttgcgc ttcccgcaac gtgtcggcgt tcaccacgtt aaactgaata tgctgcaact
    12001 taagctgggt aaacgcccgt aagaagtcgg ccagtttgcg taatcccgct tcaccttcca
    12061 gggtcgccgg agtgaatttc acgttcagca acgtaccgtt agacagcagc gtattatcga
    12121 gcttactgac tgacttcagt accgctgttg gcccttgtgc gtcctgaccc agcataggtg
    12181 acaagccgcc gtctgccagc tgttctccgg caaaacgacc gtctggcgtc gcgccaacca
    12241 ccgatcccaa cgggacgtga gcagaaacgg tatacgatcc cggcgtgaag taaccgccgc
    12301 gcgggttctg gtatttttcc acttctttgc agtagtggcg caacagttcg gcgctaatgt
    12361 tatccacctc gtcgatatcg ttaccgtatt tctcaaagcg gttaattaag cgagcgcgga
    12421 ctttttcgcc ttctggcgtt gcgaagttgg cttttaatac cgacagcaat tcgtcaaaac
    12481 ttaaacgctg ttgctcaaaa accatccctt tcaacgcatg gagagaatcg ctcaggttgg
    12541 cgataccgat cccctgtacg ccggagaagt tataacgcgc gccgccatcg gtaatatcgc
    12601 ggcctttttc cagacaatcg ctgataaaag acgagagcag cggtacaggt gcccagtcgc
    12661 gatggccgat atcgcaaata ttactgcctt caaccatcag ggtgatgtag tggctgatct
    12721 tggcacggat ctgttccagt aaaccttcat aagtcagcgc ggcattgcct tcattttcat
    12781 gcaggcagat ttccatcact ttcagcaggt taaacatcgc gatgtcatgc aagccgtagg
    12841 ttctgccggg aatagataat tccacacagc ccactacgga atagtcgcgc gcatcttcca
    12901 gcgaaacgcc acggttgagg aacgctggca ccaccacttc atcgttaaag atttgcggaa
    12961 taccggtgcc gaggcgaatg gtttcggcgg ttttcatcag gaacggcgtg tcgatcaagg
    13021 cgttagtgcg cacgccgagg ttcggttgcg gtaattgcac gctttgataa gcgtcaaggc
    13081 aaaggaacga aagcacgttc accgcgctac gtccgttctc ggttaacccg ccgagcagtg
    13141 cggtatagcc ggtcgggaaa cctgcgaaat aacgcgcgct gctggtggag cgcaacagca
    13201 cgatgtcgtt gcatttcacc cataaagatt cgagtagttc tttcaggaac gccggatctt
    13261 cgccctgggt taaagatgcc tgatagaacg gcaacatata ctggtcgaag cgccccaacg
    13321 atagcgaact ggcgttggat tcgtattgca gaatgatgtt catgtaccag aataactggc
    13381 acgcctgcca gaacgtctgc ggcttatgtt cggcgttatg gcgggagatc tccgcaatag
    13441 tcagcagttc ttcgcgacgc tgggcatctg tgcagtttgc cgccattgtt tccgccagtt
    13501 cagcgtaacg cagaatgtgt ttctgcgagg cttccagcag taacagcgcg gcctgataaa
    13561 agtgattctc cggctgttgc tgacaatgtt gctgcatctg cgccaccagc tcccccagcc
    13621 cgtgattcag caggcgtggg taatcaataa taatgtgccc ctggccttta tctgtctggt
    13681 tgatgctgaa aatctgcgtg ctggtcgcgg cttttacttc atctgtcatc tgcccgttga
    13741 tgaaatcttt catcgaacgt ttttcccagt acgggaacaa ctcttcacgg tagatacgtt
    13801 tatcttcttc actgatagca aagcggtcct gcggacgcgt cgggaattga tccagctctt
    13861 tcagcagcca gtaagggtcc atttccggcg acataatccc agcgcgcggt tttacggtgc
    13921 ggttaccggc aatcagttct tcatcacgaa tcgaaatttc aacatgttca aggatatacg
    13981 ctgttgcttt cgcccggcgc aatatcaccg gttcgccttc ggtttgccga tggctggcgg
    14041 tataaagcag cgcccgctcc agcgagattt cacgggtatt ggcaaacagt gcagttttga
    14101 ggcgagagat acgattcgtc atgaggaact cctgtgggaa agcgaacccg cccttgcgag
    14161 cgggagaaga acttaagcgg tttgcgccag gtgagcttca attttgctca taatggcgtc
    14221 agcacgtttt actgcatcgc tgatgttgac gcgcacgatg gtcttgccag caaaacgctc
    14281 ttcaaacttg atgccgatat ctttggtcag aatcaccata tcagcgctcg ccacatcttc
    14341 cgcagtcagt tcattttcca gaccaattga cccctgggtt tctactttca cttcccagcc
    14401 tttcgctttc gcggcacttt ccagcgcctc tgctgccata taggtatggg caacacctga
    14461 aggacatgcg gttactgcaa taattttcgt catggctcgt tcctcaatta attaatttca
    14521 aaatccaaat ccaggtcgtc ttctttttca tcagtcgaag acccattttt acgcgccaga
    14581 cttttcagca cgttcacaca aacagccgtc accactgctc cgacagccac tgctgcgata
    14641 taacccagct tgccttcaac caccggcagc acaatcagac caccccagcc tgcatagcac
    14701 tgcgcaccga ccagcgccgc agttactgca ccacaaactg aaccgaccat gatggaagga
    14761 atgacacgca gcggatcggc agcggcgaaa ggaatcgccc cttcagtaac gccaacacag
    14821 cccatcacca gtgccgcttt gccggtttcg cgctcttctg cggagaaatt tttacgacca
    14881 atcagcgtcg ccagccccat ccccagcggc gggatacaaa tacccacggc agcgatggcc
    14941 accacggtat aaacaccctg agcaacgcaa atcagcatga aggcataggc cactttgtta
    15001 accggaccgc ccatatcgaa cgccagcatc agacccatga tcaccgccag cataacaatg
    15061 ctgccctgct gcatcccctg aagccactga gtcaggctgt tggtcaacgc ccctacaggc
    15121 tcgcccaagc cccacatcat gatgcctgcg gtaatcagtg tgccgacgat aggaataatg
    15181 aagataggca tcaccgagcg cagaacttta tgcaccggaa ttttcttcag gtaatgcacc
    15241 acgatgccgc cgataatccc ggcgatcagt gcaccaaaga agcccgcacc aaagctgtta
    15301 ccaacccagg caccgatagc gcacggagcc agcgcagaac gctctgcaat ggaataaccg
    15361 atgtacgctg cgaggaaagg caccatcagc gtcaagcccg caacgccgat atcaaacagt
    15421 tttttcagat ttggatcggc tacggcatcc ggcactgcgc ctttgccata caacatgacg
    15481 gaaaccgcca gcaaaatacc gcccgatacc acgaagggaa tcatgtgtga aacgcccgtc
    15541 attaaatgct gacgggtatt tttcaggatc tgcaccaact cattcataag ctgctcccgg
    15601 gcttgcgaaa gcccatgtcc atatttttga tggaggaaac aataggcaat cgcaggcgga
    15661 gcaaacagtg gataaaaagg ccatttactg gacttttgta atatcagtac aaaaatgcga
    15721 tccgcctcat aacttgcgat aaaccggaag catgccgcaa aacagcgtct tgtgagacgc
    15781 gtcgcaaatt gacggttaca ttacatttgt ccagcttttg gcagatttgt cacatggcag
    15841 gccgttgccg tgcgctctta tcctgtaaac agaaaaccgt accgggagag aggcaatggc
    15901 cctgattgtg gaatttattt gtgagctacc taacggcgta catgcacgtc cggcaagcca
    15961 cgttgaaacg ctgtgtaata ctttttcatc acaaattgag tggcataacc tgcgcactga
    16021 ccgcaagggc aacgccaaaa gcgcccttgc gctgattggc accgatacgc tggcgggcga
    16081 taactgccag ttactgattt ccggggccga cgaacaggaa gcgcaccagc gtttaagcca
    16141 atggctgcgc gatgaattcc cccactgcga tgcgccgctg gcggaagtta aatctgacga
    16201 actggaacca ctgccggttt cactgaccaa tctgaatccg caaattatcc gcgcccgcac
    16261 cgtgtgcagc ggtagtgcag gcggcattct gacgccgatc tcttctttag atctcaatgc
    16321 gctgggtaat cttcccgcag ccaaaggcgt tgacgccgag caatccgcac tggaaaacgg
    16381 cctgacgctg gtactgaaaa acattgagtt tcgtctgctg gatagcgacg gtgccaccag
    16441 cgcgattctg gaagcgcacc gatccctggc tggcgatact tccctgcgcg aacatttact
    16501 ggcaggcgtc agcgccggat taagctgcgc cgaagcgatt gtcaccagtg cgaatcactt
    16561 ttgcgaagag ttcgcccgtt ccagcagcag ctacctgcaa gaacgtgccc tggacgtacg
    16621 cgacgtctgc ttccagttac tccagcaaat ctacggtgag caacgcttcc cggcaccggg
    16681 caaactgacg cagcccgcca tttgtatggc tgatgaactg actcccagcc agttcctcga
    16741 actggataaa aatcacctca aaggtctgtt actgaaaagt ggcggcacca cctcacatac
    16801 cgtaattctt gcccgttcgt tcaacattcc gacactggtt ggtgtagata ttgatgccct
    16861 tactccgtgg cagcatcaaa cgatttatat cgacggcaac gctggggcga ttgtggttga
    16921 gccaggagaa gccgtagctc gttattatca gcaagaagcc cgcgtacagg acgccctgcg
    16981 tgagcaacag cgtgtctggc tgacccaaca agcccgtacc gctgacggta tccgcattga
    17041 aattgccgct aacatcgctc actccgtgga agcgcaggcc gcattcggca atggtgcgga
    17101 aggcgttggt ttgttccgca ctgaaatgct ctatatggat cgcaccagtg caccgggcga
    17161 aagcgagctg tacaacattt tttgtcaggc gctggagtct gccaacggac gcagcattat
    17221 tgtgcgcact atggacattg gcggcgacaa acccgttgat tatctgaaca ttccggcaga
    17281 agctaacccg ttcctcggtt atcgcgctgt gcgtatttat gaagaatacg cctcgctgtt
    17341 caccacacaa ctacggtcga tcctgcgcgc ctccgctcac ggcagcctga aaatcatgat
    17401 cccgatgatc tcctcaatgg aagagatctt atgggtgaaa gaaaaactgg cggaagccaa
    17461 acagcaactg cgtaacgaac acattccgtt tgatgagaag atccagcttg gcattatgct
    17521 ggaagtaccg tcggtgatgt tcatcatcga tcaatgctgc gaagagattg atttctttag
    17581 tattggtagt aatgacctga cgcaatatct gctggcagtg gatcgcgata acgctaaggt
    17641 tactcgtcac tacaacagcc tgaatccggc attcttgcgg gcgctcgatt acgccgtgca
    17701 ggcggtgcat cgccagggca aatggattgg tctgtgcggt gagctgggag cgaaaggttc
    17761 cgtgctgccg ttgctggtcg gcttagggct ggatgaactc agcatgagcg caccatcaat
    17821 tccggcggcg aaagcgcgga tggcgcaact tgatagccgt gagtgccgca agttgctcaa
    17881 ccaggcaatg gcctgccgta cttcgctgga agtggaacac ctgctggcgc aattccgcat
    17941 gacccaacag gacgcaccgc tggtcaccgc cgagtgcatc acgctggaaa gtgactggcg
    18001 cagcaaagaa gaagtgctca aaggcatgac cgataacctg ctgctggcgg gccgctgccg
    18061 ctatccgcgt aaactggaag ccgacttatg ggcgcgcgag gccgttttct ctaccggtct
    18121 gggctttagt tttgccattc cacacagcaa atcagaacac attgagcaat ccaccatcag
    18181 cgtggcgcgt ctgcaagcgc cggtgcgctg gggcgatgat gaagcgcaat tcatcattat
    18241 gttaaccctg aacaaacacg ctgcgggcga tcagcacatg cgcattttct cgcgcctcgc
    18301 tcgccgcatc atgcacgaag aattccgtaa cgcgctggtt aacgccgcct ctgccgacgc
    18361 tatcgccagc ctgctgcaac atgaactgga actgtaaaag gaaacatcat ggaactgtat
    18421 ctggacaccg ctaacgtcgc agaagtcgaa cgtctggcac gcatattccc cattgccggg
    18481 gtgacaacta acccgagcat tatcgctgcc agcaaggagt ccatatggga agttctgccg
    18541 cgtctgcaaa aagcgattgg tgatgagggc attctgtttg ctcagactat gagtcgtgac
    18601 gcgcagggta tggtggaaga agcgaagcgc ctgcgcgacg ccattccggg cattgtggtg
    18661 aaaatcccgg tgacttccga aggtctggcc gccattaaga tgctgaaaaa agagggtatt
    18721 actacgcttg gcaccgcagt gtacagtgct gcacaagggt tactggccgc gctggcaggg
    18781 gcaaaatacg ttgctccgta tgttaaccgc gtagatgccc agggcgggga cggcattcgt
    18841 acggttcagg agctgcaagc gctgttagaa atgcacgcac cagaaagcat ggtgctggcg
    18901 gccagcttta aaacgccgcg tcaggcgctg gactgtttac tggcaggatg tgaatccatc
    18961 accctgccct tagatgtagc gcaacaaatg ctcaacaccc ctgcggtaga gtcagctata
    19021 gagaagttcg aacacgactg gaatgccgca tttggcacta ctcatctcta aaggagcaat
    19081 tatggaccgc attattcaat caccgggtaa atacatccag ggcgctgatg tgattaatcg
    19141 tctgggcgaa tacctgaagc cgctggcaga acgctggtta gtggtgggtg acaaatttgt
    19201 tttaggtttt gctcaatcca ctgtcgagaa aagctttaaa gatgctggac tggtagtaga
    19261 aattgcgccg tttggcggtg aatgttcgca aaatgagatc gaccgtctgc gtggcatcgc
    19321 ggagactgcg cagtgtggcg caattctcgg tatcggtggc ggaaaaaccc tcgatactgc
    19381 caaagcactg gcacatttca tgggtgttcc ggtagcgatc gcaccgacta tcgcctctac
    19441 cgatgcaccg tgcagcgcat tgtctgttat ctacaccgat gagggtgagt ttgaccgcta
    19501 tctgctgttg ccaaataacc cgaatatggt cattgtcgac accaaaatcg tcgcgggcgc
    19561 acctgcacgt ctgttagcag cgggtatcgg cgatgcgctg gcaacctggt ttgaagcgcg
    19621 tgcttgctct cgtagcggcg cgaccaccat ggcgggcggc aagtgcaccc aggcggcgct
    19681 ggcactggct gaactgtgct acaacaccct gctggaagaa ggcgaaaaag cgatgcttgc
    19741 cgccgaacag catgtagtaa ccccggcgct ggagcgcgtg attgaagcga acacctattt
    19801 gagcggcgtt ggttttgaaa gcggcgggct ggcggcggct cacgcggtgc ataacggcct
    19861 gaccgctatc ccggacgcgc atcactatta tcacggtgaa aaagtggcat ttggtacgct
    19921 gacgcagctg gttctggaaa acgcaccggt tgaggaaatc gaaaccgtag ctgcacttag
    19981 ccatgcggta ggtttgccaa taactctcgc tcaactggat attaaagaag atgtcccggc
    20041 gaaaatgcga attgtggcag aagcggcatg tgcagaaggt gaaaccattc acaacatgcc
    20101 tggcggcgcg acgccagatc aggtttacgc cgctctgctg gtagccgacc agtacggtca
    20161 gcgtttcctg caagagtggg aataacctac tccaaactcc cggcttgtcc gggagtttga
    20221 acgcaaaatt gcctgatgcg ctacgtttat caagcctacg aaatctctgc aatatattga
    20281 atatgcgtgc ttttgtaggc cggataaggc gttcactccg catccggcac tctgtgccag
    20341 taatctgaaa ctcccacgtt gttcaggagt tttttatccg cttctggaca ttttctccac
    20401 agaacaatcg ttagcccgga aggtcgaatc tgtgactctt attttcacgg acgaaccaga
    20461 tgaaagcttc actggcgctg ctcagcctgc taacggcatt taccagccac tccttaaaat
    20521 ctcccgccgt tccaccaacc gtggtacaaa tccaggccaa taccaacctt gccatcgcag
    20581 acggtgccag acagcaaatc ggcagcacgc tattttacga tccggcgtat atgcagctta
    20641 cctatcctgg cggtgatgtc ccgcaagaac gcggggtatg ttccgatgtg gtgatccgtg
    20701 cattgcgcag ccagaaggtc gatttgcaga aactggtgca cgaagatatg gcgaagaatt
    20761 ttgccgagta cccgcaaaaa tggcagttaa agcgcccgga cagcaacatc gatcaccgtc
    20821 gggtgcctaa tctggaaacc tggtttaccc gccacgataa aacacgcccc atcagcaaga
    20881 accccagtga ctatcaagcg ggcgatattg tctcctggcg actggataac ggactggcac
    20941 atattggggt ggtgtcagat ggcttcgccc gcgacggtac gccgctggtg atacataaca
    21001 ttggcgcagg cgcgcaggaa gaagatgtgc tgtttagctg gcggatggtg gggcattatc
    21061 gttattttgt taaataagcg atcgccccac atgaagaaaa aattcagatg ctttttacac
    21121 tgacagcttc ttttttctta cggctcacca gcgccagtgc cagcacaatc agcacaatac
    21181 cgctaccttc aacggccccc ggattctcac cgagcagcca ccaggaaaag agtacgccgc
    21241 aaacgggaac ggccagcgtg cttaagctgg caatactggc aggcaagttt ttcaatacaa
    21301 acaaccataa gctccacgcc agcgccgtcg ccagaatcgc actgtaggcc agcgcccaga
    21361 acacggtggg ctgccagtca atttcacgtt gcggcaccag taaagcgacc acactcatca
    21421 ccagcgccgc atagagcatc tgccaggatg ttaacgataa taaatccacg cgcggatgac
    21481 gggtgtatag gcgtttagca acaatcgcgc tcgcccccca actgacgccg gagaggattg
    21541 ccagcatggc acttttcatt gaagagaaat cgagttgcca cggctgcaac accaaaaata
    21601 agccgaaagc ggcaatcagt atcgcgaaat attgcccacg tcgcaggcgt tcaccgagaa
    21661 acaacgcggc gaaaatcacc acccagaacg gcatggtata gcttaggatc gccaccttcc
    21721 ccgctccgcc gctgaccagc gcccactgcg ccaggccaac catcccgcag gtttgtaaca
    21781 gggcaatggc taaggtgtat ttaaacggtg tcgggcgcat tccgcgacca cgtaataaaa
    21841 ggacgatgaa taaaacgaga gcgccgaaaa tgcagcgtaa ggcggtaaag tcgaaggcac
    21901 cgatgtagct ggtgacttgc ttcatgaaaa tccagctata actccagata agtgtgagca
    21961 caaccaggcc actgattgcc agtgggttgc tctttcctgc ggcagacatg agagatccag
    22021 tgtgtagttt tcctgtggac actatacgcc ggtaaagaaa cttcagcgac tgcctgaaag
    22081 acagtcgctg aagaaggtca gattacagca ggtcgaaacg gtcgaggttc atcactttca
    22141 cccatgccgc cacgaagtct ttaacaaact tctcgtgggc atcgctgctg gcgtaaactt
    22201 ccgctaccgc acgcaggaca gagttagaac caaataccag atccgcacgg ctggctgtgt
    22261 atttcacttc gccggtttca cggtcacgac cttcgaacag ctctttcgat tcgtcagtcg
    22321 ctttccactc gtaacgcata tccagcaagt tcacgaagaa gtcattgctc aatacgccaa
    22381 cgcggtcagt gaagacgccg tttttgctgc catcgaagtt ggcacccagt acacgcatcc
    22441 cgcccaccag cgcagtcatt tccggcgcgg tcagcgtcag ttgctgtgct ttgtcgatca
    22501 gcagtgactc ggtggtggaa acgtccagac gagcgcgata gttacggaaa ccgtcagcaa
    22561 ttggctccag cagctcaaac atctcaatgt cagtctgatc ctgacgcgca tcaacgcgac
    22621 ccggcgcaaa cggtacatga atgctcaaac ctgcggcgct tgcggctttc tcaacaccaa
    22681 ccacaccagc cagcacgatg atatccgcca gcgaggcttt accagactct ttctggattt
    22741 tctccagaac aggcagagca cgaacggctg cggcgttcac atcccagtcg cgctgcggca
    22801 ttaatgccag acgcgcaccg ttggcaccac cgcgtttgtc gccaccacgg aaggtagaag
    22861 cagatgccca ggccaccgat accagctcac taacagacag accagaatcc gcaatcgcga
    22921 atttcagatc gataatgtcc tgctcggtcg ggttgtagat cggctgcggc agcggatctt
    22981 gccagatcag atcttctttc ggtacttccg gtccgatgta acgagatttc ggccccatat
    23041 ccctgtgcgt cagtttgaac caggcacggg caaaggcttc gttgaacgcc tgcggatcgt
    23101 tgaggaaacg acgagagatc ttctcgaact caggatcaaa acgcagcgtc aggtcggtca
    23161 ccagcatcgt cggtttacgt ttcttcgacg gatcgaacgg atccgggata atttccggtg
    23221 cgtctaccgc ttcgaactgg attgcgccag ccggactgcg ggtctgtacc cactcatatt
    23281 tgaacaggtt ctcgaagaaa tagttgctcc actgggtcgg cgtctgggtc cagacaactt
    23341 ccagaccaga ggtaatggca tctgcgccaa cgccgctgcc gtaagtgctc gcccagccta
    23401 aaccttgttc ttcaatcggt gcagcttctg gatcaggacc tacatttgat gtcggaccgg
    23461 caccgtgggt tttacccagc gtatgaccac ccgcaatcag cgccacggtt tcttcgtcgt
    23521 tcatgcccat gttgccgaag gtcgcgcgga tagctgctgc cgcagaaagc ggttcgccgc
    23581 tgtggtccgg gccttccggg ttaacgtaaa tcaggcccat ctcggttgca cccagcggtg
    23641 ctttcgccag cgcttccgga tgacggtgag tcagccaggc tttttcatca ccccagttaa
    23701 catccagatc cggttcccag acgtcttcac gaccggcacc aaaaccgaag gtacggaagc
    23761 cggagttttc cagcgccacg ttacctgcga ggataaacag gtcggcccag gagattttct
    23821 gaccatattt ctgtttgatt ggccacaaca ggcgacgcgc tttatcgagg cttacgttat
    23881 ccggccagga gttcagcggt gcaaaacgtt gctgaccacg acccgcgccg ccgcgtccat
    23941 cgattgaacg gtaagtaccc gcgccgtgcc aggccatacg aataaacaga ccggcgtaac
    24001 tgccccagtc ggcaggccac cacggctgag attctgtcag cagggctttc agatcttttt
    24061 tcaggccgta gtaatctaat ttgctgaatt ctttgcggta gtcaaagtcc tcacccagtg
    24121 ggttagaacg attagaatgt tggtttaaca ggtcaacacg gagttgattt ggccaccagt
    24181 cgcgagtggt tgtgcccgcc cccgcgctct ggtcgtgacc gccctgatgg aacgggcatt
    24241 tgccagtggc tgtggtgtta tgaatatcgt ctgacgtgct catcaatgtg ctcccctcta
    24301 cagtgttacc gttacgatac acagcgttag agagaagtta taattgaatt aatccacgga
    24361 tgcgatagtt gagatcttac atattgttgg ttaaagagat gtagatcaaa ttgatcgtaa
    24421 ttaagctttt ttgattatgt ccgaattcgg acaaatgctt tataaaaaag ggttttaggt
    24481 tcatatcctt caagtaatga gggagaaaac aaggctgata accttatttt cccgccctca
    24541 tttcgaggca gcattttgtg ctctgtttaa aatttgtgat cactgtgtga ttttcacaaa
    24601 agccacacta tttataaacc aggtcgaaca cccagcgtat ggcaaatcgc gtaactcatt
    24661 tcagcgcggt taagcgtata gaagtggaaa tctttcactc cttcacggct taaaatcttc
    24721 accatatcca tggcaatatt cgctcccacc agtttgcggg tttcggcatc gtcgtccagc
    24781 ccgtcaaaca tttgtgccat ccacgccgga atacgcacgt tggtcatatc ggcaaatttc
    24841 ttcgcttgtt taaagttcga gaccggcaaa attcccggaa taatttccac atcaataccc
    24901 gccgatacgc agcggtcacg aaaacgcagg tagctttcga catcaaagaa gaactgagta
    24961 atcgcgcggt tggctccggc atcgactttg cgtttcaggt tgagcaaatc cgcctgagcg
    25021 ctttttgctt ccgggtgaac ctccggatac gccgccacgg agatatcgaa atctgccact
    25081 tcttttaaca gcgtcaccag gtcagaagca tacatttccg gcttaccact tcccggcggc
    25141 agatcgccac gcagcgccac gatatgacga ataccgttat tccagtagtc gcgtgcaatg
    25201 gtgcgcagct cgtcgggcgt cgcatcaatg caagtaagat gcggtgccgc ttccagacca
    25261 gtgcgatctt taatgccttt aataatgctg tgcgtacggt cgcgctcgcc ggagttcgcg
    25321 ccataggtca ccgatacaaa cttcggtttc aggctgctaa ggcgatcgat ggagttccac
    25381 agggtctgct ccatttcact ggtacgcggc gggaaaaact cgaacgaaac gttaatttgc
    25441 ccctggactt ctgccaggct ctgattcagg gcatcccgct ggctggcgtg aaaaaagctc
    25501 ataccttacc tcatcaatcg cttgtagtta tatgttgtgt tgtgcacatc tatccgttta
    25561 gacgtccaga tgtaaagatg aaggaaaagc cgaagggcgt caaccgaaaa atgaccaatg
    25621 atggtgagga aaaatcaggg aagatgaaaa aacttcagga tggtaagaaa aagaaaatcc
    25681 ggtatgcaaa gcaaaccgga ctgcaaatat aaactaacca tgtacttatt gcttcttgcc
    25741 ggattcgtcg taaacgctta atccggccta atcctatgat aattcaatat atttcattag
    25801 aaaccataaa cccgaaaaca tgagtaccgg gcattattaa atttctgaaa ttacaacaac
    25861 tgtgccagcc ggttgatatc cgactgaatc gccccggcgg tgacgtcgcg ccccgcgcca
    25921 ggcccacgga tcaccagcgg gttgtcgcga taccagcggc tttcgatggc aaagacgtta
    25981 tcgcacggca gcagtgatgc cagcggatgg tcttcacgca ccgcctccac gcccacacgc
    26041 gctttgccgt tggcatcgaa acgcgccacg tagcgcagca ccagccccat ttcgcgggcc
    26101 gcttccagcc gttgcaccat ctgctcgtta agttcatcgc cattttcaaa gaaatggtcg
    26161 atgctgccgc cttcgcaatg agcaggcacc agcgattcca cacgtacctg gtccggttca
    26221 atgttgtaac ctgcttcacg cgccagaatt accagcttgc gcattacgtc tttgccggag
    26281 aggtcgtcac gcggatcagg ctcggttaag ccctgctgcc acgcctgatc caccagctcg
    26341 gtaaacggca cgctaccgtc gaattgcagg aacagccagg agagcgtgcc ggagaagatc
    26401 ccgctgatcg acaaaatagt atcgccgctg tcgatcagat cgcgcacggt gtggttgatc
    26461 ggcaagcccg caccgacggt ggcattgtac agccagtgac gcccggtttt ttcgaaggcg
    26521 tcgtggatct ggcgatattt attgctgtcg ctggctcccg ccagtttgtt ggcgctgatg
    26581 acgtggaaac cgtggctggc gaaatcaaga tactgatcag caagctgctg gctggcggta
    26641 acgtccagca ccactaaatc atcatacgga tgggcgcgca tccacaggaa caacgactct
    26701 tcatcctgct caaccgcttc atcgttgaag aaggctaacg cgcggctggc gtccagcccg
    26761 tcatagctca acaggctgcg gcggctgtcc accacacctg ccagcacaaa ctcaaagccg
    26821 gtacgtgccg aaagcgtgct ctgctcacgg gcgaacagtt ccagccaacg ggaaccgata
    26881 ttgcccttac cgaacaatac caggccgatg cgtttttctg cgcggaagac ggactgatgc
    26941 agcccctgaa tcaggctttc ggtcgggccg gtgcgcagta ctgccaccag gctgatgccg
    27001 tcatcggact gccaggtaaa ttcgaccggc tggcctttca gttgctgcca gaagcggtgg
    27061 caatgcagcg ggttacgggt gacgcctgca ccgaccatcg ccaccagcgc cagcccctga
    27121 cgcaggcgca gttcgccagg taatcccgct tcgtcgagga ttttcagcgc actgtcggcc
    27181 acttctgagg tgtagcaaaa ttgcagcaac tggcgatcgt tatgtacgcc aaccgccagc
    27241 gggcgtacct gcgcgcgttt caggatttgg tcgatctctt tatgcgccag tttgaaatcc
    27301 tgactggcgg gcacctgaaa ctcaatcaaa cagacatcat cgtggctggt gacaatacgc
    27361 gcaccagtac cggaggccag cacgcgttca atgcgcgtgg aaccttgatc cggcgtgtag
    27421 ctacagcgca gttgcaggtc gatttcgctg ccagaaaccg gctgtaaagt acgggcgtga
    27481 agaacgggag ccgccaggcg cgccagttcg ctggcctcat ccagacgcag caacggcagc
    27541 aggcaggcat ctttcacttt acgcgggtcg gcactgtata ccccggcgac gtcgctccag
    27601 atggttacgc gagaaacacc cgccagcgca ccgatttgtg tcgcggaata gtcggaaccg
    27661 ttacgcccca gcagcaccgt ttcaccggcg ttgttgcggc tgataaatcc ggtcaccacc
    27721 agacgtttgc ccggatgttg caccagcagc tgttgcagca acgggtaaga aagcccttca
    27781 tcaacctgcg gttgtgcggc gcgttcagcg cgtaaaaact cgcgggcatc aagccaggcc
    27841 gctggcagcc cttgttgatt aagtaccgca gacatcaggc gtgccgacca tacttccccg
    27901 tggcccacca cttccgcata cactgcgtcg ttaataccgc tgtcgagcag cgccgccagg
    27961 cgctcaaggt cgctgacaaa agcgctaatg aggctatcgg cttcttcagc gggtagcaga
    28021 ccgctaatca gatcgcactg atagcgacgc agcgtttgtt gaacctgatg cgcagagaga
    28081 cgatcggtct ggcttagttt caaccagtta atcaactggt tagtggtgct accggcggcg
    28141 gaaaccacca tcatatcgtc aggctgagag tactccgcca taatgcccgc gacacgcaaa
    28201 taacacttca catcagccag actactgcca ccaaatttat gcagctgacg acctttcgcc
    28261 cctgcctgcg caatcacact catttttacc ccttgtttgc agcccggaag ccattttcca
    28321 ggtcggcaat taaatcttcg ccatcttcaa taccggtgga gatacgcagc agcgtctcgg
    28381 aaatcccggc ggcagcacgc gcttctggtg ccatgcctgc atgtgtcatg gttgcggcgt
    28441 gagagattaa actttccact ccccctaatg attccgccag cgtaaacaac gacagcccgc
    28501 ccaggaaacg acgcagcgtc tgctcatcgc catccagttc aaaactcaac attgcgccaa
    28561 agcctttttg ctgacgcgcg gcaatttcat gcccctgatt ttccggcagc gacgggtgat
    28621 acagtttttt caccaacggc tgggtttgca gatatttcac aatcgcctgc gcgttgcgct
    28681 gcgccagctc catacgcggc accagcgttc gcaacccgcg tagcagcaga tagctgtcaa
    28741 acgcgccgcc cgtcacgcca atattgtttg cccaccaggc aagttcagtg acaacgtccg
    28801 ggtctttagc aatcaccacg ccggccacca cgtctgagtg accgttcaga tatttcgtgc
    28861 atgaatgcaa caccagatcg gcacctaatg ccagcggatt ttgtaatgcc gggcttaaga
    28921 aggtgttatc caccacgctc accgccccga cttcccttgc cagatggcag attttcgcaa
    28981 tatccacgac gcgtaacaat ggattacttg ggctttctac cagtaccagt ttgggtttat
    29041 ctgccagcgc tgcccgtaat gcctgttcat cgccttgatc aacaaacaac acgcgatagc
    29101 aaccgcgttt cgccaggctg tcgaacaggc gatagctacc gccgtagcag tcgtgcggcg
    29161 caaccagcag atcgccaggt ttcaaaaaga cggtcgttac caggtgaatc gcggacatgc
    29221 cggtattagt aagtactgca ccagcaccgc cttccagttc tgccagcgca cgctgaacca
    29281 catcgcgcgt tgggttgccg cgacgcgagt aatcatgcgc gcgcggttca ttaaatccgg
    29341 taaagttata tgtgctggaa agatggatcg gtgggacaac gcaaccatac tgttcgtcgt
    29401 catttaaccc gctacgcact gcgatggtgg cctgtttacg cgtcatgtga tgaagttccc
    29461 tgggctttgt cggtgaaatg tcaggcacca gagtaaacat tgtgttaatg gacgtcaata
    29521 catctggaca tctaaacttc tttgcgtata gattgagcaa atcccaaata gccgttaaaa
    29581 ttatatgcat tatcacgccg acaggtgcat tacacgatgt cacggtaacg cctgtacggt
    29641 aaactatgcg ggtttacggt cagtacccac ataaattgtg tggtctggtc tcaatttatt
    29701 gacgaagagg attaagtatc tcatggctga atggagcggc gaatatatca gcccatacgc
    29761 tgagcacggc aagaagagtg aacaagtcaa aaagattacg gtttccattc ctcttaaggt
    29821 gttaaaaatc ctcaccgatg aacgcacgcg tcgtcaggtg aacaacctgc gtcacgctac
    29881 caacagcgag ctgctgtgcg aagcgtttct gcatgccttt accgggcaac ctttgccgga
    29941 tgatgccgat ctgcgtaaag agcgcagcga cgaaatcccg gaagcggcaa aagagatcat
    30001 gcgtgagatg gggattaacc cggagacgtg ggaatactaa agcggaaaag agcggcgcgg
    30061 agttaaccag ccgctttttt catacaagga cgtttaacga tgaaaatcag gctactgatc
    30121 ctcagcctgc tggtttctgt gcctgccttt gcctggcagc cgcaaactgg cgacatcatc
    30181 tttcagatct ctcgctcatc gcaaagtaaa gcgatccaac tggcgaccca ttccgattac
    30241 agccacaccg gtatgctggt gatgcgtaac aaaaagccct acgtttttga agcggtcggc
    30301 ccggtgaaat acaccccgct caagcagtgg attgcccatg gtgaaaaggg caaatacgtc
    30361 gttcgccgcg ttgaaggcgg actgagtgtt gaacaacagc aaaaactggc gcaaacggca
    30421 aaacgttatc ttggtaaacc gtatgatttc agcttctcat ggagcgacga tcgccagtac
    30481 tgttcggaag tggtgtggaa ggtttaccag aacgcgctgg gaatgcgcgt gggcgaacag
    30541 cagaagttga aagagtttga tctcagcaac ccgctggtcc aggcgaagct caaagaacgc
    30601 tacggtaaaa atattccgct tgaggaaacg gtagtttcac cacaagccgt tttcgacgcg
    30661 ccacaactca ccacggttgc caaagagtgg ccgctgtttt cgtggtaatg gatgatgaaa
    30721 aaaataattc ccgccgtagt ctgtttgttg ctttgtagtt gcacgacctt tccgcaagct
    30781 gtcgctccgg taaacggtga tgcctccaat tagttgaatt aaggatataa tactcgcttt
    30841 taaggttgtt tcatggtcac agttaacctt cattgccccc gttgccagtc cgttcaggtt
    30901 taccgtcacg ggcagaaccc aaaaagacat gatcgattcc gcggccgtga ctgtcaccgg
    30961 gtatttcagc tcagttactg ttacgagccc cgtaaaccgg gagttaaaga ccaaatcgct
    31021 gaaatgactt tcaacggtgc cggggttcgc gatactgccc gtacgctgaa aatcggcatt
    31081 aatacagtca tccgaacttt aaaaaactct cgccacgaag aataacgtca tccccggtcg
    31141 ctcatgctga tgtggcactc atctgcaaac ttagtcagca atggagcttt gtcggcagta
    31201 aagcgcgaca gcactggctc tggtacgtgt acaacacgaa aactggtggt gttctggcct
    31261 acacttttgg cccccggact gacgaaacct gtcgtgaatt gcgggcgctg cttacccttt
    31321 taccatcggc atgttgacca ctgacgaatg gggtagttac gctagagagt taccgaagga
    31381 gaagcatctg actggtaaga tttttactca gcacattgag cgtaacaatc tgaccctgag
    31441 aacccgaatc aaacgtctgg cccgcagaac catctgtttc tcgcgttctg tagaacttca
    31501 tgaaaaagtc atcggtgctt ttatcgaaaa tatatgttct actaattgga gtcatcaccc
    31561 ttctgataag ctttccttgg atgattacca gactgaatac acagccaaag atttttacct
    31621 cattctgctc tttttt
//
LOCUS       DAPGWB010000038        31591 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.038, whole genome shotgun sequence.
ACCESSION   DAPGWB010000038 DAPGWB010000000
VERSION     DAPGWB010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 31591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31591
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.038"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(22..909)
                     /gene="rarD"
                     /locus_tag="RHX79_001708"
     CDS             complement(22..909)
                     /gene="rarD"
                     /locus_tag="RHX79_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDV2196894.1"
                     /translation="MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVI
                     WSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA
                     SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFS
                     FAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIA
                     AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFI
                     WVALAIFVMDAIYTQRRKS"
     gene            complement(961..1428)
                     /locus_tag="RHX79_001709"
     CDS             complement(961..1428)
                     /locus_tag="RHX79_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312777.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HDV2196895.1"
                     /translation="MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAF
                     KNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTI
                     DLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG"
     gene            1593..2462
                     /gene="pldA"
                     /locus_tag="RHX79_001710"
     CDS             1593..2462
                     /gene="pldA"
                     /locus_tag="RHX79_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HDV2196896.1"
                     /translation="MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQ
                     EHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGIL
                     GPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGY
                     NHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLK
                     IGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQ
                     TRVGVGVMLNDLF"
     gene            2595..4424
                     /gene="recQ"
                     /locus_tag="RHX79_001711"
     CDS             2595..4424
                     /gene="recQ"
                     /locus_tag="RHX79_001711"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026263.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HDV2196897.1"
                     /translation="MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCL
                     VVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTRE
                     QQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRP
                     EYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLM
                     EKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRA
                     DVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA
                     EAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEG
                     RQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDY
                     GHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSL
                     QLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEM
                     AEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDEE"
     gene            4488..5108
                     /gene="rhtC"
                     /locus_tag="RHX79_001712"
     CDS             4488..5108
                     /gene="rhtC"
                     /locus_tag="RHX79_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine export protein RhtC"
                     /protein_id="HDV2196898.1"
                     /translation="MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLG
                     ITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAP
                     APQIELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVET
                     LAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR"
     gene            complement(5170..5790)
                     /gene="rhtB"
                     /locus_tag="RHX79_001713"
     CDS             complement(5170..5790)
                     /gene="rhtB"
                     /locus_tag="RHX79_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine/homoserine lactone efflux protein"
                     /protein_id="HDV2196899.1"
                     /translation="MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIA
                     GLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSL
                     ASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDII
                     VMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA"
     gene            5901..6923
                     /gene="pldB"
                     /locus_tag="RHX79_001714"
     CDS             5901..6923
                     /gene="pldB"
                     /locus_tag="RHX79_001714"
                     /EC_number="3.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase L2"
                     /protein_id="HDV2196900.1"
                     /translation="MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVR
                     FVRFRAQHHDRVVVICPGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADP
                     HLGHVNRFNDYVDDLAAFWQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIA
                     LTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRY
                     RRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNR
                     MHDRFCELRTAAGHPVEGGRPLVIKGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSG
                     NRSTEV"
     gene            6931..7731
                     /gene="yigL"
                     /locus_tag="RHX79_001715"
     CDS             6931..7731
                     /gene="yigL"
                     /locus_tag="RHX79_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar/pyridoxal phosphate phosphatase YigL"
                     /protein_id="HDV2196901.1"
                     /translation="MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTAHGINFVFATGR
                     HHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDII
                     TNVYRDDEWFMNRHRPEEMRFFKEAVFKYALYEPGLLEPEGVSKVFFTCDSHEQLLPL
                     EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMND
                     AEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS"
     gene            7807..8706
                     /gene="bioP"
                     /locus_tag="RHX79_001716"
     CDS             7807..8706
                     /gene="bioP"
                     /locus_tag="RHX79_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter"
                     /protein_id="HDV2196902.1"
                     /translation="MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFL
                     PFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIY
                     DIMSKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKR
                     LMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIG
                     YFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVH
                     RKWVAPRSSQTADDRRRDCALSE"
     gene            complement(8594..9547)
                     /gene="metR"
                     /locus_tag="RHX79_001717"
     CDS             complement(8594..9547)
                     /gene="metR"
                     /locus_tag="RHX79_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MetR"
                     /protein_id="HDV2196903.1"
                     /translation="MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRL
                     GFRLFVRKSQPLRFTPQGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQ
                     WLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFD
                     YEVRLVLAPDHPLAAKTRITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSV
                     DNTLLLIQMVAARMGIAALPHWVVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQP
                     ITEAFIRSARNHACDHLPFVKSAERPTYDAPTVRPGSPARL"
     gene            9665..11926
                     /gene="metE"
                     /locus_tag="RHX79_001718"
     CDS             9665..11926
                     /gene="metE"
                     /locus_tag="RHX79_001718"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDV2196904.1"
                     /translation="MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLTVGRELR
                     ARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRG
                     RAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPV
                     LLGPVTYLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELP
                     QAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVVEL
                     HKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSV
                     ETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAV
                     EKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKG
                     NLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGW
                     VQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPRE
                     DVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEA
                     FRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDY
                     PNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAAL
                     ANMVQAAQNLRRG"
     gene            complement(11965..12780)
                     /locus_tag="RHX79_001719"
     CDS             complement(11965..12780)
                     /locus_tag="RHX79_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HDV2196905.1"
                     /translation="MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPA
                     YHARPKQSDGPLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFA
                     DIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHN
                     PQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
                     LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKKSL"
     gene            13042..13803
                     /gene="udp"
                     /locus_tag="RHX79_001720"
     CDS             13042..13803
                     /gene="udp"
                     /locus_tag="RHX79_001720"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HDV2196906.1"
                     /translation="MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKL
                     ASHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHI
                     NVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSD
                     TFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAG
                     VIVNRTQQEIPNAETMKQTESQAVKIVVEAARRLL"
     gene            13944..15371
                     /gene="rmuC"
                     /locus_tag="RHX79_001721"
     CDS             13944..15371
                     /gene="rmuC"
                     /locus_tag="RHX79_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HDV2196907.1"
                     /translation="MDFSIMVYAVIALVGVAIGWLFASYQYAQQKAEQLAEREEMVAE
                     LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIR
                     QMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF
                     GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG
                     LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR
                     ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE
                     ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI
                     GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY
                     RLRSVPEQPNDEAYQRDDEYNQQSR"
     gene            15466..16221
                     /gene="ubiE"
                     /locus_tag="RHX79_001722"
     CDS             15466..16221
                     /gene="ubiE"
                     /locus_tag="RHX79_001722"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDV2196908.1"
                     /translation="MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMS
                     FGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLK
                     MGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVL
                     KPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQ
                     DTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF"
     gene            16235..16840
                     /gene="ubiJ"
                     /locus_tag="RHX79_001723"
     CDS             16235..16840
                     /gene="ubiJ"
                     /locus_tag="RHX79_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis protein UbiJ"
                     /protein_id="HDV2196909.1"
                     /translation="MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGF
                     STSLILVFSERQVDVLGEWAGDADCTVIAYASVLPKLRDRQQLTALIRSGELEVQGDI
                     QVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEA
                     ITEEWRMAPGPLEVAWFAEETAAVERAVDALTKRLEKLEAK"
     gene            16837..18477
                     /gene="ubiB"
                     /locus_tag="RHX79_001724"
     CDS             16837..18477
                     /gene="ubiB"
                     /locus_tag="RHX79_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HDV2196910.1"
                     /translation="MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWM
                     PNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDG
                     KLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDIL
                     PVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRR
                     NFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFF
                     TQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFN
                     RDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTAR
                     RFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAF
                     KEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGAT
                     LVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR"
     gene            18556..18825
                     /gene="tatA"
                     /locus_tag="RHX79_001725"
     CDS             18556..18825
                     /gene="tatA"
                     /locus_tag="RHX79_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HDV2196911.1"
                     /translation="MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMS
                     DDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV"
     gene            18829..19344
                     /gene="tatB"
                     /locus_tag="RHX79_001726"
     CDS             18829..19344
                     /gene="tatB"
                     /locus_tag="RHX79_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDV2196912.1"
                     /translation="MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLAT
                     TVQNELTQELKLQEFQDSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPE
                     KASDEAHTIHNPVVKDNEAAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKT
                     AAPSPSSSDKP"
     gene            19347..20123
                     /gene="tatC"
                     /locus_tag="RHX79_001727"
     CDS             19347..20123
                     /gene="tatC"
                     /locus_tag="RHX79_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatC"
                     /protein_id="HDV2196913.1"
                     /translation="MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHL
                     VSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKH
                     ERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMA
                     LFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLL
                     AIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE"
     gene            20165..20947
                     /gene="tatD"
                     /locus_tag="RHX79_001728"
     CDS             20165..20947
                     /gene="tatD"
                     /locus_tag="RHX79_001728"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' ssDNA/RNA exonuclease TatD"
                     /protein_id="HDV2196914.1"
                     /translation="MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQ
                     AQKLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFST
                     PEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREE
                     MQACVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSS
                     RRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGIAF"
     gene            complement(20944..21432)
                     /gene="rfaH"
                     /locus_tag="RHX79_001729"
     CDS             complement(20944..21432)
                     /gene="rfaH"
                     /locus_tag="RHX79_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription/translation regulatory transformer
                     protein RfaH"
                     /protein_id="HDV2196915.1"
                     /translation="MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRT
                     AVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPK
                     DIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFR
                     KL"
     gene            21599..23092
                     /gene="ubiD"
                     /locus_tag="RHX79_001730"
     CDS             21599..23092
                     /gene="ubiD"
                     /locus_tag="RHX79_001730"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HDV2196916.1"
                     /translation="MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLR
                     AGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPK
                     GFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLIT
                     WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVS
                     VALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGY
                     IEQGETAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGV
                     ALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQF
                     MYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSK
                     MGLDATNKWPGETQREWGRPIKKDPDVVAHIDAIWDELAIFNNGKSA"
     gene            23138..23839
                     /gene="fre"
                     /locus_tag="RHX79_001731"
     CDS             23138..23839
                     /gene="fre"
                     /locus_tag="RHX79_001731"
                     /EC_number="1.5.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-flavin reductase"
                     /protein_id="HDV2196917.1"
                     /translation="MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDER
                     DKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDRILKDHQIVVDIPHGEAWLRDDE
                     ERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLCELEALSLKHP
                     GLQVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSER
                     NAREDRLFGDAFAFI"
     gene            complement(24031..25194)
                     /gene="fadA"
                     /locus_tag="RHX79_001732"
     CDS             complement(24031..25194)
                     /gene="fadA"
                     /locus_tag="RHX79_001732"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadA"
                     /protein_id="HDV2196918.1"
                     /translation="MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPA
                     LEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAA
                     RMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGI
                     SREMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA
                     LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCD
                     PSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINL
                     NGGAIALGHPLGCSGARISTTLLNLMERKDVQFGLATMCIGLGQGIATVFERV"
     gene            complement(25204..27393)
                     /gene="fadB"
                     /locus_tag="RHX79_001733"
     CDS             complement(25204..27393)
                     /gene="fadB"
                     /locus_tag="RHX79_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadB"
                     /protein_id="HDV2196919.1"
                     /translation="MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIG
                     VLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLP
                     VPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGA
                     DSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLYWKAKRQPK
                     LEPLKLSKIEATMSFTIAKGMVAQTAGKHYPAPITAVKTIEAAARFGREEALNLENKS
                     FVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAW
                     KGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDR
                     VDVVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERPENFCGMH
                     FFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFA
                     GFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQK
                     DYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQPKRDFSE
                     EEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAK
                     YLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGDLKTA"
     gene            27583..28914
                     /gene="pepQ"
                     /locus_tag="RHX79_001734"
     CDS             27583..28914
                     /gene="pepQ"
                     /locus_tag="RHX79_001734"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HDV2196920.1"
                     /translation="MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLD
                     DHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTE
                     DVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVLDYLHYYRS
                     FKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIV
                     ALNEHAAVLHYTKLDHQAPEEMYSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKD
                     VNDEQLALIATMKAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMP
                     HGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIES
                     LLAPWREGQFSKHFNWQKIEALKPFGGIRIEDNVVIHENNVENMTRDLKLA"
     gene            28914..29528
                     /locus_tag="RHX79_001735"
     CDS             28914..29528
                     /locus_tag="RHX79_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMPACT family protein"
                     /protein_id="HDV2196921.1"
                     /translation="MESWLIPAAPVTVVEEIKKSRFITMLAHTDGVEAAKAFVESVRA
                     EHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGVGEITAVVVRY
                     YGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYSQLTGIEALLGQCDG
                     KIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE"
     gene            29567..31018
                     /gene="trkH"
                     /locus_tag="RHX79_001736"
     CDS             29567..31018
                     /gene="trkH"
                     /locus_tag="RHX79_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkH"
                     /protein_id="HDV2196922.1"
                     /translation="MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFF
                     VALAIGSMLWWPNRKEKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAF
                     FESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQL
                     YRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATI
                     AIGGFSTHDASIGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRM
                     FIGVQFTLVVICTLVLWFHNVYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLP
                     VLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPER
                     ILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVVATLNNLGPGLGVVADNFTSM
                     NPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE"
     gene            31030..31575
                     /gene="hemG"
                     /locus_tag="RHX79_001737"
     CDS             31030..31575
                     /gene="hemG"
                     /locus_tag="RHX79_001737"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HDV2196923.1"
                     /translation="MKTLILFSTRDGQTREIASYLASELKELGIQADVANVHRIEEPQ
                     WENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTN
                     SYARKFLMNSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTD
                     WEQVANFAREIAHLTDKPTLK"
BASE COUNT         7306 a         8074 c         8665 g         7546 t
ORIGIN      
        1 acggcctacc catgttaatt cttaactttt tctacgctgc gtataaatcg catccatcac
       61 aaaaattgcc agcgccaccc aaataaaggc gaaagtcacc atcttatcgg cacccggttt
      121 ttcaccataa aacgtcacag ccagcaggaa catcagcgtc gggccaatgt actggaaaaa
      181 gcctaacgtt gagagacgca ggcgcgtggc agcggcagta aaacacaaca gcggtacggt
      241 agtgacaata ccggcggcga tcagcagtaa attcagcgac atcgggtttt gccccatatg
      301 gctggttgag ctgtcggcaa tagcaaacag gtaaatcgcc gccacgggca gcagccacat
      361 ggtttcaatt aacatgccgg tttgtgcttc taccgcaatc ttcttgcgca ccaggccgta
      421 gaaggcaaaa ctaaatgcca gccccagcgc gataataggt agcgaaccaa aagtccacag
      481 ctggactaac acgccacata tcgccagaat caccgccagc cattgcatcc ggcggaatcg
      541 ctcgccgagg aaaatcatcc ccagcacaat gttcaccagc gggttaataa agtaaccaag
      601 gctcgcttcc agcatatggt gattgttcac cgcccagata aacagtagcc agttgccacc
      661 aatcagcacg gcagagactg ccagcataaa aattttctgt ggcgtctgaa tcagcgtttt
      721 taaataggac cactggcggc aaatgctcat cagcaccacc ataaagaaaa acgaccagat
      781 cacgcgatgc gtcaggattt catcggcggg cacgtagtaa atcaacttga agtacgctgg
      841 cgctataccc caaataaaat aagcggcaag agcgagtaat acgccctgcc gcgtttgttt
      901 tgcatccatc gggaatactc atttttaatt ggtaacagca gtttacctgc ttttatgtct
      961 tcaacctacc atataggtgg cggtggcact ggcaatataa agctgttctt cattgtgtaa
     1021 ttcaacgcgg gcgacggcga ctttattgcc tgcacgcaac aggctactgg tagcagtaaa
     1081 acgctcgccc ctgcctgggc gcagataatc aacgcgaaga tcaatggtcc ccatccgcga
     1141 tagccgctgg cgtagttcat cttcactgat ggtttcgtgg cgggttaagg tacttcccac
     1201 gcacaccaga ccggcggcga catccagcgc cgacgcaatg actccgccgt gcaaaatgct
     1261 ttgcgcccag ttacccacca tcatcggctg atttttaaag gccagctgtg cgaactcttt
     1321 ttcgtaacgc tccagctcca tccctaacgc gcggttaaat ggcatgtgat aaacaaacat
     1381 ctcacccact aatttcaggg cttgttcagc ggtcagtacg gcagacatat catccttata
     1441 cttcattggt taatgaaatg ttgattttat gcttctttgt tgttggtttc tactttagga
     1501 agggataact aacggcaatg gagttaagta tgtaaaatag cccgcagaaa aacattcacc
     1561 ttatcaataa ttcgttacgg agaacacgac cgatgcggac tctgcagggc tggttgttgc
     1621 cggtgtttat gttgcctatg gcagtatatg cacaagaggc aacggtgaaa gaggtgcatg
     1681 acgcgccagc ggtgcgtggc agtattatcg ccaatatgct gcaggagcat gacaatccgt
     1741 tcacgctcta tccttatgac accaactacc tcatctacac ccaaaccagc gatctgaaca
     1801 aagaagcgat tgccagttac gactgggcgg aaaatgcgcg taaggatgaa gtaaagtttc
     1861 agttgagcct ggcatttcca ctgtggcgtg ggattttagg cccgaactcg gtgttgggtg
     1921 cgtcttatac gcaaaaatcc tggtggcaac tgtccaatag cgaagagtct tcaccgtttc
     1981 gtgaaaccaa ctacgaaccg caattgttcc tcggttttgc caccgattac cgttttgcag
     2041 gttggacgct gcgcgatgtg gagatggggt ataaccacga ctctaacggg cgttcagacc
     2101 cgacctcccg cagctggaac cgcctttata ctcgcctgat ggcagaaaac ggtaactggc
     2161 tggtagaagt gaagccgtgg tatgtggtgg gtaatactga cgataacccg gatatcacca
     2221 aatatatggg ttactaccag cttaaaatcg gctatcacct cggtgatgcg gtgctcagtg
     2281 cgaaaggaca gtacaactgg aacaccggct acggcggcgc ggagttaggc ttaagttacc
     2341 cgatcaccaa acatgtgcgc ctttatactc aggtttacag cggctatggc gaatcgctca
     2401 tcgactataa cttcaaccag acccgtgtcg gtgtgggggt tatgctaaac gatttgtttt
     2461 gatgaacggt tgagtggttg gcaaatctgg aatccagcat ccaggattac cctctcagag
     2521 actaaaagca ttgcagtttc tcgcgcaggc gctgaaaata gcgcctgttt ttatttcagg
     2581 caatcggggt gaatgtggcg caggcggaag tgttgaatct ggagtccgga gctaaacagg
     2641 ttttacaaga aacctttggc taccaacagt ttcgccccgg ccaggaagaa attatcgaca
     2701 ctgtgctttc cggtcgcgat tgcctggtcg tcatgcccac cggtggcgga aaatcccttt
     2761 gctatcaaat tcctgcctta ttgctaaacg gccttaccgt ggttgtttca ccgctgattt
     2821 cgttgatgaa agatcaggtg gatcaactgc aagccaacgg cgtggcggcg gcgtgcctta
     2881 actcgacgca aacccgcgag cagcaacttg aagtgatgac aggctgtcgc accgggcaaa
     2941 tccgcctgct ttatatcgcg ccggaacgcc tgatgctgga taactttctt gagcatctgg
     3001 cgcactggaa tccggtgtta ttagccgttg atgaagcgca ctgtatctcc caatggggcc
     3061 acgatttccg cccggaatat gccgcgctcg gtcagttgcg ccagcggttc ccgacgctgc
     3121 cgtttatggc gctgaccgcc acagccgacg acaccacgcg ccaggatatc gtgcgcctgc
     3181 tggggctgaa cgatccgctg attcaaatca gcagttttga ccgtccgaat attcgctaca
     3241 tgctgatgga gaaattcaaa ccgctcgatc agttgatgcg ctacgtgcag gaacagcgcg
     3301 gtaagtccgg cattatctac tgcaacagcc gggcgaaagt agaagacacc gctgcgcgcc
     3361 tgcaaagcaa gggtattagc gcggcggcct atcatgccgg gctggaaaat aatgtccgcg
     3421 ccgacgtgca ggagaaattc cagcgcgatg acctgcaaat tgtggtggcg acggtggcgt
     3481 tcggcatggg catcaataaa ccaaacgttc gcttcgtggt ccactttgat attccgcgca
     3541 atatcgaatc ctattatcag gaaaccggtc gcgccgggcg tgatggcctg cctgcggaag
     3601 cgatgctgtt ttacgatccg gctgatatgg cgtggctgcg ccgttgtctg gaagagaagc
     3661 cgcaggggca gttgcaggat atcgagcgcc acaaactcaa tgcgatgggc gcgtttgccg
     3721 aagcgcaaac ttgccgtcgt ctggtattgc tgaactattt tggcgaaggg cgtcaggagc
     3781 cgtgcgggaa ctgcgatatc tgcctcgatc cgccgaaaca gtacgacggt tcaaccgatg
     3841 ctcagattgc cctttccacc attggtcgtg tgaatcagcg gtttgggatg ggttatgtgg
     3901 tggaagtgat tcgtggtgct aataaccagc gtatccgcga ctatggtcat gacaaactga
     3961 aagtctatgg catgggccgt gataaaagcc atgaacattg ggtgagcgtg atccgccagc
     4021 tgattcacct cggcctggtg acgcaaaata ttgcccagca ttctgcccta caactgacag
     4081 aggccgcgcg cccggtgctg cgcggcgaat cctctttgca acttgccgtg ccgcgtatcg
     4141 tggcgctcaa accgaaagcg atgcagaaat cgttcggcgg caactatgat cgcaaactgt
     4201 tcgccaaatt acgcaaactg cgtaaatcga ttgccgatga aagcaatgtc ccgccgtacg
     4261 tggtgtttaa cgacgcaacc ttgattgaga tggctgaaca gatgccgatc accgccagcg
     4321 aaatgctcag cgttaacggc gttgggatgc gcaagctgga acgctttggt aaaccgttta
     4381 tggcgcttat ccgcgcgcat gttgacggcg acgacgaaga gtagtcagcg gcataaaaaa
     4441 gtgccaggat gaagactccg taaacgtttc ccccgcgagt caaatgtatg ttgatgttat
     4501 ttctcaccgt cgccatggtg catattgtgg cgcttatgag ccccggtccc gatttctttt
     4561 ttgtctctca gaccgctgtc agtcgttccc gtaaagaagc gatgatgggc gtgctgggca
     4621 ttacctgcgg tgtaatggtt tgggctggga ttgcgttgct tggcctgcat ttgattatcg
     4681 aaaaaatggc ctggctgcat acgctgatta tggttggcgg tggcctgtat ctctgctgga
     4741 tgggttacca gatgctacgc ggtgcactga aaaaagaggc tgtatctgcg cctgcaccac
     4801 agattgagct ggcgaaaagc gggcgcagtt tcctgaaagg tttactgacc aatctcgcta
     4861 atccgaaagc gattatctac tttggctcgg tgttctcatt gtttgtcggt gataacgttg
     4921 gcactaccgc gcgctggggc atttttgcgc tgatcattgt cgaaacactg gcgtggttta
     4981 ccgtcgttgc cagcctgttt gccctgccgc aaatgcgccg tggttatcaa cgtctggcga
     5041 agtggattga tggttttgcc ggggcgttat ttgccggatt tggcattcat ttgattattt
     5101 cgcggtgatg ccagacgcgt cttcagagta agtcggataa ggcgtttacg ccgcatccga
     5161 cattattttt cacgcatgcc tcgccgatgc taacagcgct cccaccagca taaacaacga
     5221 gccgaaaatc ttattcagcg ccttcatctg ctttggtcct ttaatccata gagcaatccg
     5281 ttgagcaagg gtggcgtaac cgatcatcac aataatatcg actacaatag tggtgacgcc
     5341 gagcacgata tactgcatca gttgcggctg ctgtggcatg atgaattgcg gaaatagcgc
     5401 cgccagaaac acaatacttt tgggattggt gagattcaca aaaactgcgc gctggaacaa
     5461 atgtcgacgc gattgagtag aggccagcga tttaaggtca attgcaccag cggcgcgcca
     5521 ctgctggatt cccagccaaa tcaagtaagc cgcgcctgcc cacttcaaca cttcaaacgc
     5581 aatcactgag cgggaaaata gcgtccccaa ccccacgcca accagcacaa tatgaatcgc
     5641 cagtccggtc tgaagcccag caatagacgc caccgcgccg cgataaccgt ggttgagcga
     5701 ggtggtcata gtgttgattg caccagagcc tggcgacagg cttaaaatga tcgatgtcag
     5761 caggtaggca aaccaccatt ctaaggtcat gatgaactcc cggtgtgtct atttttgtgc
     5821 cacaatacgc tactgtcgca gcgttgtgtc aggcacgcta aaaaaaacga ttttacgtgg
     5881 tttaagaggc agattacccg atgtttcagc agcaaaaaga ctgggaaaca agagaaaacg
     5941 cgtttgctgc ttttaccatg ggaccgctga ctgatttctg gcgtcagcgt gatgaagcag
     6001 agtttactgg tgtggatgac attccggtgc gctttgtccg ttttcgcgca cagcaccatg
     6061 accgggtggt agtcatctgc ccggggcgta ttgagagcta cgtaaaatat gcggaactgg
     6121 cctacgacct gttccatttg gggtttgatg tcttaatcat cgaccatcgc gggcagggac
     6181 gttccggtcg cctgttagcc gatccgcatc tcgggcatgt taatcgcttt aatgattatg
     6241 ttgatgatct ggcggcattc tggcagcagg aggttcagcc cggtccgtgg cgtaaacgct
     6301 atatactggc acattcgatg ggcggtgcga tctccacatt atttctgcaa cgccatccag
     6361 gtgtatgtga cgccattgcg ctaactgcgc caatgtttgg gatcgtgatt cgtatgccgt
     6421 catttatggc acggcagatc ctcaactggg ccgaagcgca tccacgtttc cgtgatggct
     6481 atgcaatagg caccgggcgc tggcgcgcgt tgccgtttgc tatcaacgta ctgacccaca
     6541 gcagacagcg atatcgacgt aacttacgct tctatgctga tgacccaacg attcgcgtcg
     6601 gtgggccgac ctaccattgg gtacgcgaaa gtattctggc tggcgaacag gtgttagccg
     6661 gtgcgggtga tgacgccacg ccaacgcttc tcttgcaggc tgaagaggaa cgcgtggtgg
     6721 ataaccgcat gcatgaccgt ttttgtgaac tccgcaccgc cgcgggccat cctgtcgaag
     6781 gaggacgacc gttggtaatt aaaggtgctt accatgagat cctttttgaa aaggacgcaa
     6841 tgcgctcagt cgcgctccac gccattgttg attttttcaa caggcataac tcacccagcg
     6901 gaaaccgctc tacagaggtt taaatttctt atgtaccagg ttgttgcgtc tgatttagat
     6961 ggcacgttac tttctcccga ccatacgtta tccccttacg ccaaagaaac cctgaagctg
     7021 ctcaccgcgc acggcatcaa ctttgtgttt gcgaccggtc gtcaccacgt tgatgtgggg
     7081 caaattcgcg ataatctgga gattaagtct tacatgatta cctccaacgg cgcgcgcgtt
     7141 cacgatctgg atggcaatct gatttttgct cataacctgg atcgcgacat tgccagcgat
     7201 ctgtttggcg tagtcaacga caatccggac atcattacta acgtttatcg cgacgacgaa
     7261 tggtttatga atcgccatcg cccggaagag atgcgctttt ttaaagaagc ggtgttcaaa
     7321 tatgcgctgt atgagcctgg attactggag ccggaaggcg tcagcaaagt gtttttcacc
     7381 tgcgattccc atgaacaact gctgccgctg gagcaggcga ttaacgctcg ttggggcgat
     7441 cgcgtcaacg ttagtttctc taccttaacc tgtctggaag tgatggcggg cggcgtttca
     7501 aaaggccatg cgctggaagc ggtggcgaag aaactgggct acagcctgaa ggattgtatt
     7561 gcgtttggtg acgggatgaa cgatgccgaa atgctgtcga tggcggggaa aggctgcatt
     7621 atgggcagtg cgcaccagcg tctgaaagac cttcatcccg agctggaagt gattggtact
     7681 aatgccgacg acgcggtgcc gcattatctg cgtaaactct atttatcgta atcgttcttt
     7741 atttggtcag ttgtcaacct gatacttcgc tacaatggat actcgttaat caaagagttt
     7801 tccattgtgg cgctacttat catcaccacg attctgtggg ccttctcctt tagcttttat
     7861 ggcgagtacc ttgcggggca cgtcgatagc tattttgcgg tgctggtgcg cgttggcctg
     7921 gcggcactcg tttttctgcc gtttctgcgt acccgtggca atagcctgaa aacagtcggc
     7981 ctgtatatgc tggtgggcgc gatgcagctc ggcgtgatgt atatgctgag tttccgcgct
     8041 tatctctacc tgacggtttc cgaactgctg ctgttcaccg tactgacgcc gctctacatc
     8101 acgctgattt atgacatcat gagtaagcgc cgtctgcgct ggggatatgc ttttagtgcc
     8161 ttgttggcgg tgattggtgc cgggattatt cgctatgatc aggtcaccga ccatttctgg
     8221 actggcttgt tgctggtgca actctccaat atcacttttg ccatcggcat ggtgggttac
     8281 aaacgcctga tggaaactcg cccgatgccg cagcataacg cctttgcgtg gttctatctt
     8341 ggcgcgttcc tggtggcggt aattgcatgg ttcttgctgg gaaatgcgca gaaaatgccg
     8401 caaaccacgt tgcaatgggg cattctggtg tttcttggcg tggtggcttc cgggattggc
     8461 tactttatgt ggaactacgg cgcgacgcag gtggacgccg gaacgctggg cattatgaat
     8521 aatatgcacg ttccggcagg gctgctggta aacctggcta tctggcacca acagccgcac
     8581 tggccaacgt tcattacagg cgcgctggtg atcctggcct cactgtgggt gcatcgtaag
     8641 tgggtcgctc cgcgctcttc acaaacggca gatgatcgca ggcgtgattg cgcgctgagc
     8701 gaataaatgc ttctgtaatc ggctgacgct gctcgccatc gcgcacggcg gcgtacagtc
     8761 ggctccacaa gccttcgccc agggttttgg tcaccaccag accctggcgc tcaaaactct
     8821 ctactaccca atgcggtagc gcggcaatac ccatccgcgc ggcaaccatc tgaatcaaca
     8881 ataaggtgtt atcgacgctt ttcagtgacg ggctgacgcc tgccggctga agaaaatgcc
     8941 gccagacatc cagtcgacta cgctgcaccg gataaatcaa cagcgtctcg ctggcgagat
     9001 cttccggtgt aattcgcgtt ttcgccgcca gtggatggtc aggtgctaac accagacgca
     9061 cttcatagtc gaacatcggc gaataatgca ggccactgcg cggcaggata tcggaggtca
     9121 tcaccagatc cagctcgccc tgttgcaacg cgggctgcgg gtcaaacgtc acgcccgatt
     9181 taaaatccat ctctacctgc ggccagttct tatggaaatt ttctaacgcg ggcgtcagcc
     9241 actgaataca gctatggcac tcaatggcaa tgcgcagacg cgtctgctgc ggttcattgc
     9301 aggcttgcag tgcctggcta atttgcggca gcacctggtt tgccagttgc aacaggattt
     9361 ctccctgcgg tgtaaagcgt agcggctggc tcttacgcac aaatagccgg aagccaaggc
     9421 gttgttccag atcgctaaac tggtgagaca gggcggattg cgtctgatgc aacgtcgccg
     9481 cagcggctgc gagagagccg cagttccgca acgcttgtag cgttttcagg tgttttactt
     9541 cgatcatgaa agtccttcac ttcggcatga ataatttgcg cttgaggaat atacagtaac
     9601 cgccaattat ggatgtgtaa acatctggac ggctaaatac taaaaattcc ataaggggca
     9661 tataatgaca attcttaatc acaccctcgg tttccctcgc gttggcctgc gtcgcgagct
     9721 gaaaaaagcg caagaaagtt attgggcggg gaactccacg cgtgaagaac tgctgacagt
     9781 agggcgtgaa ctgcgtgctc gtcactggga tcaacaaaag caagcgggta tcgacctgct
     9841 gccggtgggc gattttgcct ggtacgatca tgttctgacc accagtctgc tgctgggtaa
     9901 tgttccgcca cgtcatcaga acaaagacgg ttcggtagat atcgacaccc tgttccgtat
     9961 tggtcgtgga cgtgcgccga ctggcgaacc tgcggcggca gcggaaatga ccaaatggtt
    10021 taacaccaac tatcactaca tggtgccgga attcgttaaa ggccaacagt tcaaactgac
    10081 ctggacgcag ctgctggagg aagtggacga ggcgctggcg ctgggccaca acgttaagcc
    10141 tgtgctgctg gggccggtta cttacctgtg gctggggaaa gtgaaaggtg aacagtttga
    10201 ccgccttagc ctgctgaacg acattctgcc ggtttatcag caagtgctgg cagaactggc
    10261 gaaacgcggc atcgagtggg tacagattga tgaacccgcg ctggtactgg aactaccaca
    10321 ggcgtggctg gacgcataca aacccgctta cgacgcgctc cagggacagg tgaaactgct
    10381 gctgaccacc tattttgaag gcgtaacgcc aaatctcgac acgattactg cgctgcctgt
    10441 tcagggtctg catgttgacc ttgtacatgg taaagatgac gttgttgaac tgcacaagcg
    10501 cctgccttct gactggctgc tgtctgcggg actgatcaat ggtcgtaacg tctggcgcgc
    10561 cgatcttact gagaaatatg cgcaaattaa ggacattgtc ggcaaacgtg atttgtgggt
    10621 ggcatcttcc tgctcgttgc tgcacagccc catcgacctg agcgtggaaa cgcgtcttga
    10681 tgcagaagtg aaaagctggt ttgccttcgc tctacaaaaa tgccatgaac tggcactgct
    10741 gcgcgatgcg ctgaacagtg gtgacacggc agctctggca gagtggagcg ccccaattca
    10801 ggcgcgtcgt cactctactc gtgtacataa tccggcggta gaaaagcgtc tggcggcgat
    10861 caccgcccag gacagccagc gtgcgaatgt ctatgaagtg cgtgctgaag cccagcgtgc
    10921 gcgttttaaa ctgccagcgt ggccgaccac cacgattggt tccttcccgc aaaccacgga
    10981 aattcgtacc ctgcgtctgg atttcaaaaa gggcaatctc gacgccaaca actaccgcac
    11041 gggcattgcg gaacatatca agcaggccat tgttgagcag gaacgtttgg gactggatgt
    11101 gctggtacat ggcgaggccg agcgtaatga catggtggaa tactttggcg agcacctcga
    11161 cggatttgtc tttacgcaaa acggttgggt acagagctac ggttcccgct gcgtgaagcc
    11221 accgattgtc attggtgaca ttagccgccc ggcaccgatt accgtggagt gggcgaagta
    11281 tgcgcaatcg ctgaccgaca aaccggtgaa agggatgctg acggggccgg tgaccatact
    11341 ctgctggtcg ttcccgcgtg aagatgtcag tcgtgaaacc atcgccaaac agattgcgct
    11401 ggcgctgcgt gatgaggtgg ccgatctgga agcggcaggg attggcatca tccagattga
    11461 tgaaccggcg ctgcgcgaag gtttaccgct gcgtcgtagc gactgggacg cctatctcca
    11521 gtggggcgta gaggccttcc gtatcaacgc cgccgtggcg aaagatgaca cacaaatcca
    11581 cactcacatg tgttattgcg agttcaacga catcatggat tcgattgcgg cgctggacgc
    11641 agacgtcatc accatcgaaa cctcgcgttc cgacatggag ttgctggagt cgtttgaaga
    11701 gtttgattat ccaaatgaaa tcggtcctgg cgtctatgac attcactcgc caaacgtacc
    11761 gagcgtggaa tggattgaag ccttgctgaa gaaagcggca aaacgcattc cggcagagcg
    11821 cctgtgggtc aacccggact gtggcctgaa aacgcgcggc tggccagaaa cccgcgcggc
    11881 actggcgaac atggtgcagg cggcgcagaa tttgcgtcgg gggtaaatcc aaaccgggtg
    11941 gtaataccac ccggtctttt ctcattacag cgacttcttc ccaccatact gcttaaacca
    12001 ctccagcata cgctgccagc catctttcgc agattcggca tgatagctcg ggcgataatc
    12061 ggcgttgaat gcatgcccgg catccgggta cacgataatc tctgctttcg cattagcagc
    12121 ccgcagcgcc tggcgcatgg tttcaacgct ctcctgcgga atgctgttat cctgaccacc
    12181 atataagccg agaaccggcg cgttaagatc ggttgcgata tcaacaggtt gtttcggtga
    12241 attcagcgac ttgtcgcccg tcagtttgcc gtaccacgcc actgcagctt ttagctgtgg
    12301 attatgcgcg gcatacagcc aggtgatacg tccaccccag cagaatccgg tgatcattaa
    12361 acgatgaaca tcgccgccgt tgcgggaagc ccaactggcg acatgatcga gatcggccag
    12421 cacctgcgag tcaggcactt ttgctaccag accgctaagc aacgtgggga tatcggcaaa
    12481 atcattcgga tcgccttcgc ggaagtaaag ttcaggtgcg atagccagat acccctccag
    12541 cgccagacgg cgacaaatgt cgcggatatg ttcatgcacg ccaaaaattt cctgcactac
    12601 aatgaccact ggcagtgggc catcgctttg ctttggtctg gcatggtaag caggcatgtt
    12661 atccccttgt gaagggatag aggtgaagcc cgccacaatc gcgtcgtccg gggtctgaac
    12721 gatggtcgaa gcgagaggcg atgcagcagg tgcaaatcca gattgttgtg ttgttgccat
    12781 ggtattctcc gtacccttat aaaaatgttg cgcaatgtta actatagtca gcatgcaaca
    12841 aatcacattg cctgaatcgg ctcatctttt atgcagtcct gcagaatgaa gagtgattta
    12901 tgtgatttga atcacttttg gtgggtaaat ttatgcaacg catttgcgtc atggtgatga
    12961 gtatcacgaa aaaatgttaa acccttcggt aaagtgtctt tttgcttctt ctgactaaac
    13021 cgattcacag aggagttgta tatgtccaag tctgatgttt ttcatctcgg cctcactaaa
    13081 aacgatttac aaggggctac gcttgccatc gtccctggcg acccggatcg tgtggaaaag
    13141 atcgccgcgc tgatggataa gccggttaag ctggcatctc accgcgaatt cactacctgg
    13201 cgtgcagagc tggatggtaa acctgttatc gtctgctcta ccggtatcgg cggcccgtct
    13261 acctctattg ctgttgaaga gctggcacag ctgggcattc gcaccttcct gcgtatcggt
    13321 acaacgggcg ctattcagcc gcatattaat gtgggtgatg tcctggttac cacggcgtct
    13381 gtccgtctgg atggcgcgag cctgcacttc gcaccgctgg aattcccggc tgtcgctgat
    13441 ttcgaatgta cgactgcgct ggttgaagct gcgaaatcca ttggcgcgac aactcacgtt
    13501 ggcgtgacag cttcttctga taccttctac ccaggtcagg aacgttacga tacttactct
    13561 ggtcgcgtag ttcgtcactt taaaggttct atggaagagt ggcaggcgat gggcgtaatg
    13621 aactatgaaa tggaatctgc aaccctgctg accatgtgtg caagtcaggg cctgcgtgcc
    13681 ggtatggtag cgggtgttat cgttaaccgc acccagcaag agatcccgaa tgctgagacg
    13741 atgaaacaaa ctgaaagcca agcggtgaaa atcgtggtgg aagcggcgcg tcgtctgctg
    13801 taattctctt ctcctgtctg aaggccgacg cgttcggcct tttgtatttt tgcgtagcgc
    13861 ctcgcaggaa atgcctttcc aactggacgt ttgtacagca caattctatt ttgtgcgggt
    13921 aagttgttgc gtcaggaggc gttgtggatt tctcaatcat ggtttacgca gttattgcgt
    13981 tggtgggtgt ggcaattggc tggctgtttg ccagttatca atatgcgcag caaaaagccg
    14041 agcaattagc tgaacgtgaa gagatggtcg cggagttaag cgcggcaaaa caacaaatta
    14101 cccaaagcga gcactggcgt gcagagtgcg agttactcaa taacgaagtg cgcagcctgc
    14161 aaagtattaa cacctctctg gaggccgatc tgcgtgaagt aaccacgcgg atggaagccg
    14221 cacagcaaca tgctgacgat aaaattcgcc agatgattaa cagcgagcag cgcctcagtg
    14281 agcagtttga aaacctcgcc aaccgtattt ttgagcacag caatcgccgg gttgatgagc
    14341 aaaaccgtca gagtctgaac agcctgttgt cgccgctacg tgaacaactg gacggtttcc
    14401 gccgtcaggt tcaggacagc ttcggtaaag aagcacaaga acgccatacc ctgacccacg
    14461 aaattcgcaa tctccagcaa ctcaacgcgc aaatggccca ggaagcgatc aacctgacgc
    14521 gcgcgctgaa aggcgacaat aaaacccagg gcaactgggg cgaggtagta ttgacgcggg
    14581 tgctggaggc ttccggtctg cgtgaagggt atgaatatga aacccaggtc agcatcgaaa
    14641 atgacgcccg ctcgcggatg cagccggatg tcatcgtgcg gctgccgcag ggaaaagatg
    14701 tggtgatcga cgccaaaatg acgctggtcg cctatgaacg ctattttaac gccgaagacg
    14761 actacacccg cgaaagcgcg ctacaggaac atatcgcgtc ggtgcgtaac catatccgtt
    14821 tgctgggacg caaagattat caacagctgc cggggctgcg aactctggat tacgtgctga
    14881 tgtttattcc cgttgaaccc gcttttttac tggcgcttga ccgccagccg gagctgatca
    14941 ccgaagcgtt gaaaaacaat atcatgctgg ttagcccgac tacgctgctg gtggcgttgc
    15001 gtactattgc caacctgtgg cgttatgagc atcaaagccg caacgcccag caaatcgccg
    15061 atcgtgccag caagctgtac gacaagatgc gtttgttcat cgatgacatg tccgcgattg
    15121 gtcaaagtct cgacaaagcg caggataact accgccaggc aatgaaaaaa ctctcttcag
    15181 gtcgcggaaa tgtgctggcg caggcagaag cgtttcgcgg tttaggagta gaaattaaac
    15241 gcgagattaa tccggatttg gctgaacagg cggtgagcca ggatgaagag tatcgacttc
    15301 ggtcggttcc ggagcagccg aatgatgaag cttatcaacg cgatgatgaa tataatcagc
    15361 agtcgcgcta gcccattagg ggtagttaag ccgggtagaa atctagggca tcgacgccca
    15421 atctgttaca cttctggaac aattttttga tgagcaggca ttgagatggt ggataagtca
    15481 caagaaacga cgcactttgg ttttcagacc gtcgcgaagg aacaaaaagc ggatatggtc
    15541 gcccacgttt tccattccgt ggcatcaaaa tacgatgtca tgaatgattt gatgtcattt
    15601 ggtattcatc gtttgtggaa gcgattcacg attgattgca gcggcgtacg ccgtgggcag
    15661 accgtgctgg atctggctgg tggcaccggc gacctgacag cgaaattctc ccgcctggtc
    15721 ggagaaactg gcaaagtggt ccttgctgat atcaatgaat ccatgctcaa aatgggccgc
    15781 gagaagctgc gtaatatcgg tgtgattggc aacgttgagt atgttcaggc gaacgctgag
    15841 gcgctgccgt tcccggataa cacctttgat tgcatcacca tttcgtttgg tctgcgtaac
    15901 gtcaccgaca aagataaagc actgcgttca atgtatcgcg tgctgaaacc cggcggccgc
    15961 ctgctggtgc ttgagttctc gaagccaatt atcgagccgc tgagcaaagc ctatgatgca
    16021 tactccttcc atgtgctgcc gcgtattggc tcactggtcg cgaacgacgc cgacagctac
    16081 cgttatctgg cagaatccat ccgtatgcat cccgatcagg ataccctgaa agccatgatg
    16141 caggatgccg gattcgaaag tgtcgactac tacaatctga cggcaggggt tgtggcgctg
    16201 catcgtggtt ataagttctg acaggagacc ggaaatgcct tttaaacctt tagtgacggc
    16261 aggaattgaa agtctgctca acaccttcct gtatcgctca cccgcgctga aaacggcccg
    16321 ctcgcgtctg ctgggtaaag tattgcgcgt ggaggtaaaa ggcttttcga cgtcattgat
    16381 tctggtgttc agcgaacgcc aggttgatgt actgggcgaa tgggcaggcg atgctgactg
    16441 caccgttatc gcctacgcca gtgtgttgcc gaaacttcgc gatcgccagc agcttaccgc
    16501 actgattcgc agtggtgagc tggaagtgca gggcgatatt caggtggtgc aaaacttcgt
    16561 tgcgctggca gatctggcag agttcgaccc tgcggaactg ctggcccctt ataccggtga
    16621 tatcgccgct gaaggaatca gcaaagccat gcgcggaggc gcaaagttcc tgcatcacgg
    16681 cattaagcgc cagcaacgtt atgtggcgga agccattact gaagagtggc gtatggcacc
    16741 cggtccgctt gaagtggcct ggtttgcgga agagacggct gccgtcgagc gtgctgttga
    16801 tgccctgacc aaacggctgg aaaaactgga ggctaaatga cgccaggtga agtacggcgc
    16861 ctatatttca tcattcgcac ttttttaagc tacggacttg atgaactgat ccccaaaatg
    16921 cgtatcaccc tgccgctacg gctatggcga tactcattat tctggatgcc aaatcggcat
    16981 aaagacaaac ttttaggtga gcgactacga ctggccctgc aagaactggg gccggtttgg
    17041 atcaagttcg ggcaaatgtt atcaacccgc cgcgatcttt ttccaccgca tattgccgat
    17101 cagctggcgt tattgcagga caaagttgct ccgtttgatg gcaagctggc gaagcagcag
    17161 attgaagctg caatgggcgg cttgccggta gaagcgtggt ttgacgattt tgaaatcaag
    17221 ccgctggctt ctgcttctat cgcccaggtt cataccgcgc gattgaaatc gaatggtaaa
    17281 gaggtggtga ttaaagtcat ccgcccggat attttgccgg ttattaaagc ggatctgaaa
    17341 cttatctacc gtctggctcg ctgggtgccg cgtttgctgc cggatggtcg ccgtctgcgc
    17401 ccaaccgaag tggtgcgcga gtacgaaaag acattgattg atgaactgaa tttgctgcgg
    17461 gaatctgcca acgccattca gcttcggcgc aattttgaag acagcccgat gctctacatc
    17521 ccggaagttt accctgacta ttgtagtgaa gggatgatgg tgatggagcg catttacggc
    17581 attccggtgt ctgacgttgc ggcgctggag aaaaacggca ctaacatgaa attgctggcg
    17641 gaacgcggcg tgcaggtgtt cttcactcag gtctttcgcg acagcttttt ccatgccgat
    17701 atgcaccctg gcaacatctt cgtaagctat gaacacccgg aaaacccgaa atatatcggc
    17761 attgattgcg ggattgttgg ctcgctaaac aaagaagata aacgctatct ggcagaaaac
    17821 tttatcgcct tctttaatcg cgactatcgc aaagtggcag agctacacgt cgattcaggc
    17881 tgggtgccac cagataccaa cgttgaagag ttcgaatttg ccattcgtac ggtctgtgaa
    17941 cctatctttg agaaaccgct ggccgaaatt tcgtttggac atgtactgtt aaatctgttt
    18001 aatacggcgc gtcgcttcaa tatggaagtg cagccgcaac tggtgttact ccagaaaacc
    18061 ctgctctacg tcgaaggggt aggacgccag ctttatccgc aactcgattt atggaaaacg
    18121 gcgaagcctt tcctggagtc gtggattaaa gatcaggtcg gtattcctgc gctggtgaga
    18181 gcatttaaag aaaaagcgcc gttctgggtc gaaaaaatgc cagaactgcc tgaactggtt
    18241 tacgacagtt tgcgccaggg caagtattta cagcacagtg ttgataagat tgcccgcgag
    18301 cttcagtcaa atcatgtacg tcagggacaa tcgcgttatt ttctcggaat tggcgctacg
    18361 ttagtattaa gtggcacatt cttgttggtc agccgacctg aatgggggct gatgcccggc
    18421 tggttaatgg caggtggtct gatcgcctgg tttgtcggtt ggcgcaaaac acgctgattt
    18481 tttcatcgct caaggcgggc cgtgtaacgt ataatgcggc cttgtttaat catcatctac
    18541 cacagaggaa catgtatggg tggtatcagt atttggcagt tattgattat tgccgtcatc
    18601 gttgtactgc tttttggcac caaaaagctc ggctccatcg gttccgatct tggtgcgtcg
    18661 atcaaaggct ttaaaaaagc aatgagcgat gatgaaccaa agcaggataa aaccagtcag
    18721 gatgctgatt ttactgcgaa aactatcgcc gataagcagg cggatacgaa tcaggaacag
    18781 gctaaaacag aagacgcgaa gcgccacgat aaagagcagg tgtaatccgt gtttgatatc
    18841 ggttttagcg aactgctatt ggtgttcatc atcggcctcg tcgttctggg gccgcaacga
    18901 ctgcctgtgg cggtaaaaac ggtagcgggc tggattcgcg cgttgcgttc actggcgaca
    18961 acggtgcaga acgaactgac ccaggagtta aaactccagg agtttcagga cagtctgaaa
    19021 aaggttgaaa aggcgagcct cactaacctg acacccgaac tgaaagcgtc gatggatgaa
    19081 ctacgccagg ccgcggagtc gatgaagcgt tcctacgttg caaacgatcc tgaaaaggcg
    19141 agcgatgaag cgcacaccat ccataacccg gtggtgaaag ataatgaagc tgcgcatgag
    19201 ggcgtaacgc ctgccgctgc acaaacgcag gccagttcgc cggaacagaa gccagaaacc
    19261 acgccagagc cggtggtaaa acctgctgcg gacgctgaac cgaaaaccgc tgcaccttcc
    19321 ccttcgtcga gtgataaacc gtaaacatgt ctgtagaaga tactcaaccg cttatcacgc
    19381 atctgattga gctgcgtaag cgtctgctga actgcattat cgcggtgatc gtgatattcc
    19441 tgtgtctggt ctatttcgcc aatgacatct atcacctggt atccgcgcca ttgatcaagc
    19501 agttgccgca aggttcaacg atgatcgcca ccgacgtggc ctcgccgttc tttacgccga
    19561 tcaagctgac ctttatggtg tcgctgattc tgtcagcgcc ggtgattctc tatcaggtgt
    19621 gggcatttat cgccccagcg ctgtataagc atgaacgtcg cctggtggtg ccgctgctgg
    19681 tttccagctc tctgctgttt tatatcggca tggcattcgc ctactttgtg gtctttccgc
    19741 tggcatttgg cttccttgcc aataccgcgc cggaaggggt gcaggtatcc accgacatcg
    19801 ccagctattt aagcttcgtt atggcgctgt ttatggcgtt tggtgtctcc tttgaagtgc
    19861 cggtagcaat tgtgctgctg tgctggatgg ggattacctc gccagaagac ttacgcaaaa
    19921 aacgcccgta tgtgctggtt ggtgcattcg ttgtcgggat gttgctgacg ccgccggatg
    19981 tcttctcgca aacgctgttg gcgatcccga tgtactgtct gtttgaaatc ggtgtcttct
    20041 tctctcgctt ttacgttggt aaagggcgaa atcgggaaga ggaaaacgac gctgaagcag
    20101 aaagcgaaaa aactgaagaa taaattcaac cgcccgtcag ggcggttgtc atatggagta
    20161 caggatgttt gatatcggcg ttaatttgac cagttcgcaa tttgcgaaag accgtgatga
    20221 tgttgtagcg cgcgcttttg acgcgggagt taatgggcta ctcatcaccg gcactaacct
    20281 gcgtgaaagc cagcaggcgc aaaagctggc gcgtcagtat tcgtcctgtt ggtcaacggc
    20341 gggcgtacat cctcacgaca gcagccagtg gcaagctgcg actgaagaag cgattattga
    20401 gctggccgcg cagccagaag tggtggcgat tggtgaatgt ggtctcgact ttaaccgcaa
    20461 cttttcgacg ccggaagagc aggaacgcgc ttttgttgcc cagctacgca ttgccgcaga
    20521 tttaaacatg ccggtattta tgcactgtcg cgatgcccac gagcggttta tgacattgct
    20581 ggagccgtgg ctggataaac tgcctggtgc ggttcttcat tgctttaccg gcacacgcga
    20641 agagatgcag gcgtgcgtgg cgcatggaat ttatatcggc attaccggtt gggtttgcga
    20701 tgaacgacgc ggactggagc tgcgggaact tttgccgttg attccggcgg aaaaattact
    20761 gatcgaaact gatgcgccgt atctgctccc tcgcgatctc acgccaaagc catcatcccg
    20821 gcgcaacgag ccagcccatc tgccccatat tttgcaacgt attgcgcact ggcgtggaga
    20881 agatgccgca tggctggctg ccaccacgga tgctaatgtc aaaacactgt ttgggattgc
    20941 gttttagagt ttgcggaact cggtgttctt cacactgtgc ttaatctctt tattaataag
    21001 attaagcaat agcatggagc gagcctcacc atcgggttcg gtgaaaatgg cctgaaagcc
    21061 ttcgaacgcg ccttcggtaa taatcacctt atcacccgga taaggggttg ccggatcgac
    21121 aatgtctttc ggtttatata ccgatagctg atgaatcacc gccgatggga ctatcgctgg
    21181 cgacgcgcca aagcgcacga agtggctgac accgcgggtc gcgttgatag tcgtggtatg
    21241 aatcacttct ggatcaaatt cgacaaacag gtagttggga aacaatggct cactgactgc
    21301 agtacgtttt ccacgcacga ttttttccag ggtgatcatc ggtgccaggc aattcacagc
    21361 ctgtctttcg aggtgttcct gggcacgttg aagttgcccg cgcttgcagt acagtaaata
    21421 ccaggattgc ataatgactc ttatccgttt aatcggggcg caaggatagc aaaagcttta
    21481 cgctaagtta attatattcc ccggtttgcg ttataccgtc agagttcacg ctaatttaac
    21541 aaatttacag catcgcaaag atgaacgccg tataatgggc gtagattaag aggctacaat
    21601 ggacgccatg aaatataacg atttacgcga cttcctgacg ctgcttgaac agcagggtga
    21661 gctaaaacgt atcacgctcc cggtggatcc gcatctggaa atcactgaaa ttgctgaccg
    21721 cactttgcgt gccggtgggc ctgcgctgtt gttcgaaaac cctaaaggct actcaatgcc
    21781 ggtgctgtgc aacctgttcg gtacgccaaa gcgcgtggcg atgggcatgg ggcaggaaga
    21841 tgtttcggcg ctgcgtgaag ttggtaaatt attggcgttt ctgaaagagc cggagccgcc
    21901 aaaaggtttc cgcgacctgt ttgataaact gccgcagttt aagcaagtat tgaacatgcc
    21961 gacaaagcga ctgcgtggtg cgccctgcca acaaaaaatc gtctctggcg atgacgtcga
    22021 tctcaatcgc attcccatta tgacctgctg gccggaagat gccgcgccgc tgattacctg
    22081 ggggctgacc gtaacgcgcg gcccgcataa agagcggcag aatctgggca tttatcgtca
    22141 gcagctgatt ggtaaaaaca aactgattat gcgctggctg tcgcatcgcg gcggcgcgct
    22201 ggattatcag gagtggtgtg cggcgcatcc gggcgaacgt ttcccggttt ctgtggcgct
    22261 gggtgccgat cccgccacga ttctcggtgc agtcaccccc gttccggata cgctttcaga
    22321 gtatgcgttt gccggattgc tacgtggcac caagaccgaa gtggtgaagt gtatctccaa
    22381 tgaccttgaa gtgcccgcca gtgcggagat tgtgctggaa gggtatatag aacaaggcga
    22441 aactgctccg gaagggccgt atggcgacca caccggttac tataacgaag tcgatagttt
    22501 cccggtattt accgtgacgc atattaccca gcgtgaagat gcgatttacc actccaccta
    22561 tactggtcgt ccgccggatg aacccgcggt gctgggtgtc gcactgaacg aagtgtttgt
    22621 gccgattctg caaaaacagt tcccggaaat tgtcgatttt tacctgccgc cggaaggctg
    22681 ttcttatcgt ctggcggtag tgacgataaa aaaacagtac gccggacacg cgaagcgcgt
    22741 catgatgggc gtctggtcgt tcttacgcca gtttatgtac actaagtttg tgatcgtttg
    22801 cgatgatgac gtcaacgcac gcgactggaa cgatgtgatt tgggcgatta ccacccgtat
    22861 ggatccggcg cgggatactg ttctggtaga aaatacgcct attgattatc tggattttgc
    22921 ctcgcctgtt tccgggctgg gttcaaaaat ggggctggat gccacgaata aatggccggg
    22981 ggaaacccag cgtgaatggg gacgtcccat caaaaaagat ccagatgttg tcgcgcatat
    23041 tgacgccatc tgggatgaac tggctatttt taacaacggt aaaagcgcct gatgcgcgtt
    23101 tgttttgccc tatttatcga tccgacagag aaagcgcatg acaaccttaa gctgtaaagt
    23161 gacctcggta gaagctatca cggataccgt atatcgtgtc cgcatcgtgc cagacgcggc
    23221 cttttctttt cgtgctggtc agtatttgat ggtagtgatg gatgagcgcg acaaacgtcc
    23281 gttctcaatg gcctcgacgc cggatgaaaa agggtttatc gagctgcata ttggcgcttc
    23341 tgaaatcaac ctttacgcga aagcagtcat ggaccgcatc ctcaaagatc atcaaatcgt
    23401 ggtcgatatt ccccacggag aagcgtggct gcgcgatgat gaagagcgtc cgatgatttt
    23461 gattgcgggc ggcaccgggt tctcttatgc ccgctcgatt ttgctgacag cgttggcgcg
    23521 taacccaaac cgtgatatca ccatttactg gggcgggcgt gaagagcagc atctgtatga
    23581 tctctgcgag cttgaggcgc tttcgttaaa gcaccctggt ctgcaagtgg tgccggtggt
    23641 tgaacaaccg gaagcaggct ggcgtgggcg tactggtacc gtgttaacgg cggtattgca
    23701 ggatcatggt acgctggcag agcatgatat ctatattgcc ggacgttttg agatggcgaa
    23761 aattgcccgt gacctgtttt gcagtgagcg taatgcgcgg gaagatcgcc tgtttggcga
    23821 tgcgtttgca tttatctgag atataaaaaa acccgcccct gacaggcggg aagaacggca
    23881 actaaaactt tattcagtgg catttagatc tatgtcgcat ccggcaatcg gtgcacgatg
    23941 cctgatgcga cgctggcgcg tcttatcagg cctacattgg tgcaggatcg gtagaccgga
    24001 taaggcgttc acgccgcatc cggcaagtgg ttaaacccgc tcaaacaccg tcgcaatacc
    24061 ctgacccaga ccgatacaca tcgtcgccag accaaactga acgtctttgc gttccatcag
    24121 attcagcagc gtggtgctga tacgcgcacc ggaacagccc agcggatgac ccagcgcgat
    24181 cgcaccaccg ttgaggttga tcttctcgtc aatctgctca atcagtccca gatctttaat
    24241 acatggcagg atctgcgcgg caaaggcttc gttcatctca aacacgccga tatcgctggc
    24301 agaaagcccc gcttttttca gcgccagctt cgaggccgga accgggccgt aacccataat
    24361 cgatgggtca caaccaacga ccgccatcga acgcacacga gcgcgcggct taagacctaa
    24421 ttcatgggcg cggctttcac tcatcaccag catggcagct gcgccatcgg aaagtgcaga
    24481 agatgtgccc gccgttaccg taccgtttac tggatcaaac gccggacgca gcgtggcgag
    24541 ggcttccacg gtggtttccg ggcgaatcac ttcgtcgtaa ttaaactgct tcaggacgcc
    24601 gtcggcatcg tgaccaccag ttgggatgat ttcattttta aatgcggccg actgcgtggc
    24661 ggcccaggcg cgggcgtgtg accgcgcggc aaaggcatcc tgcatttcac ggctgatacc
    24721 gtgcatacgc gccagcattt ctgctgttaa gcccatcatg cccgccgctt tggcgacatt
    24781 gcggctcagg ccggggtgaa aatcgacgcc gtgactcatc ggcacatggc ccatatgctc
    24841 cacgccgcca accagacatg cctgcgcatc gccggtcata atcatccgtg ctgcgtcatg
    24901 cagtgcctgc atggatgaac cacacaagcg attgacggta accgccggga cagagtgtgg
    24961 tacttctgcc agcagcgccg cgttacgggc gatgttaaaa ccctgctcca gcgtctgctg
    25021 cacacaaccc cagtaaatat cgtcgagggc cgccgcttcc agcgccgggt tacgcgccag
    25081 caggctacgc attaaatgag cggagagatc ttctgcacgc acgttacgaa aagcaccgcc
    25141 cttcgaacgg cccatcgggg tgcgaattgc atcgacaatg acaacctgtt ccattgtgac
    25201 tccttaagcc gttttcaggt cgccaaccgg acgggctggc tcaaccggag gatagtacgg
    25261 ttcgttatga cgcgctttat tacgcagacc ttccggcact tcatacagcg ggccgaggtg
    25321 ctgatattgc tgtgccatat cgaggtattt tgcgctaccg agggtgtcca gccagcggaa
    25381 cgcgccgccg tggaacggag ggaagcccag gccgtagacc agcgccatat ccgcttccgc
    25441 cggagtggcg ataatgcctt cctccagaca gcgcaccact tcgttgacca tcgggatcat
    25501 catgcgggcg ataatctcct cttcgctgaa atcgcgcttc ggctggctca cttctgccag
    25561 caggtcttca acggcggcgt cttcttcttt cttcggctta cctttgctgt cttctttata
    25621 acgccagaaa ccgaggccgt tcttctgacc aaagcggttg gcatcaaaca gcgcgtcgat
    25681 ggcatcgcgg taatctttct gcatcctctg cgggaagcct gctgccatga cagcctgggc
    25741 atgatgcgcg gtgtcaatgc ccacgacatc cagcagatat gccggaccca tcggccagcc
    25801 aaactgtttt tccatcactt tgtcgatctt gcggaaatcc gcgccgtcgc gcagcagctg
    25861 gctgaaaccg gcgaaatacg ggaacagcac gcggttaaca aagaagccgg ggcagtcgtt
    25921 aaccacaatc ggcgtcttgc ccatcttgct cgcccaggcg acaactttcg cgatggtttc
    25981 gtcggagctt ttctcgccgc gaataatttc taccaacggc attcggtgga ccgggttaaa
    26041 gaagtgcatt ccgcagaagt tttccgggcg ttccagcgcg ttggccagtt cgctgatagg
    26101 aatggttgaa gtgttagacg ccagcacggt atccgggcgt actttttgtt cggtttctgc
    26161 cagtacggct tttttcactt tcgggttttc gacaaccgct tctaccacaa catccacgcg
    26221 gtcaaacccg gcgtagtcga gcgttgggtg gattgtggag atcacgccag ccagtttcag
    26281 accatcgatc ttgccgcgct caagctgctt gttcagcagt ttcgcggctt cggtcatgcc
    26341 gagggttaac gacttgtcgt tgatatcttt catgacaacc ggcacgcctt tccacgcaga
    26401 ctggtaagcg atgccgccgc ccataatgcc tgcacccagc accgcggcct gtttcggggt
    26461 ttcaacgtct ttggtgagtt tcttcgcttt gccttttaca tattgatcgt taaggaaaat
    26521 gccgaccagt gcgcgggctt cgttggtatg cgccagcggg acaaaacttt tgttttccag
    26581 gtttaaggct tcttcacgac caaaacgggc cgcagcttca atggttttta ctgcggtgat
    26641 gggggccgga taatgtttcc ccgctgtttg tgcgaccatc cctttagcga tggtgaagct
    26701 catggtggct tcaatcttgc tcagttttag tggttccagc ttcggctgac gttttgcttt
    26761 ccagtagagg tcgccgttaa tggcctggcg taaaaccgcc tttgcgcctt caaccagttt
    26821 ttctgctttg actacgccat ccaccagacc gattttcagc gcctgatccg cgccgacatc
    26881 tttaccggcg gcaatgattt ccagcgcact gtcagcgccc agcatacgtg gcatacgtac
    26941 agaaccgcca aagcccggca tgatgcccag tttggtttcc ggcagaccga tgcgcagatc
    27001 cggcgtcgcc agacgataat cggtcgccag cacgcattcg cagccaccgc ccagcgcata
    27061 gccgttgacg gcagcaatgg tcggcaccgg cagatcttcc aggcgattaa acacgctatt
    27121 ggcaaagtgc agccactgac ttaactgttc ttcaggaacg aggaacaggg acaaaaattc
    27181 ggtgatatca gcaccgacga taaaggctgc tttgttcgaa cgcagcagca gcccttttag
    27241 atctgattgc tgttccagca cgccgatggc ctcgccgagg ctggcgacgg tcgcagtgtc
    27301 gagtttatta actgaacctg gggcatcaaa taccagttcg gcaatgccat cttccagcca
    27361 gtcaaggtac agggtgtcgc ctttgtaaag catgtcagtc tcctgaatcc gcaaggtgat
    27421 ctggtcgtac cagatgcatc gaagtgtgta ttttgtgtta aaaatatgca aataaaagat
    27481 taaagaaatg ccgatctgat cacgctcggc agaaatcacg ctctggatga acgatgtgct
    27541 aagatgcgga gacttaaggt caaaaaaaca gaagggtaaa aaatggaatc actggcctca
    27601 ctctataaaa atcatatagc taccttacag gaacggactc gcgatgcgct ggcgcgcttc
    27661 aagctggatg cgttacttat tcactccggc gaactgttca acgtttttct cgacgatcat
    27721 ccctatcctt ttaaagtgaa cccgcaattc aaagcgtggg tgccggtaac tcaggtgcca
    27781 aactgctggc tgctggtgga tggcgtgaac aagccgaaac tgtggttcta tctgccggtt
    27841 gattactggc acaacgtcga accgctgccg acctctttct ggactgagga tgtggaagtg
    27901 atcgcgctgc cgaaagccga tggcattggt agcctgctgc ctgctgcgcg cggcaatatc
    27961 ggttatatcg gtccggtgcc ggaacgtgcg ctgcaactgg gtattgaggc cagcaacatc
    28021 aacccgaaag gggtgctcga ctacctgcat tactatcgct ccttcaaaac cgagtacgaa
    28081 ctggcctgta tgcgtgaagc gcagaaaatg gcggtcaacg gtcatcgcgc ggcagaagaa
    28141 gcgttccgtt ctggcatgag cgagttcgat atcaacattg cctatctgac cgcgaccggt
    28201 catcgtgata ccgacgtacc ttacagcaac attgtggcgc ttaacgaaca cgctgcggtg
    28261 ctgcattaca ccaaactgga ccaccaggca ccggaagaga tgtacagctt cctgctggat
    28321 gccggggccg aatataacgg ctatgcggct gacctgaccc gtacctggtc ggcaaaaagt
    28381 gacaacgact acgcacagct ggtgaaggac gttaatgatg aacaactggc gctgatcgct
    28441 accatgaaag caggcgtcag ctatgtggat taccacatcc agttccatca gcgcatcgcc
    28501 aaactgctgc gtaaacatca aatcatcacc gatatgagtg aagaagcgat ggtcgaaaac
    28561 gatctcaccg gaccgtttat gccgcacggt atcggtcatc cgctgggcct gcaggtgcat
    28621 gacgtagccg gttttatgca ggatgatagc ggtacacacc tcgcggcacc ggcaaaatat
    28681 ccgtacctgc gctgcacccg tattctccag ccgggtatgg tgttaaccat cgaaccgggt
    28741 atctacttca ttgaatcgct actggcaccg tggcgtgaag ggcagttcag caagcacttc
    28801 aactggcaga aaattgaagc actgaaaccg ttcggcggca ttcgtatcga agacaacgtg
    28861 gtgatccacg aaaataacgt ggaaaacatg acccgggatc tgaaactggc gtgatggaaa
    28921 gctggttaat tcctgcggca ccggtcacgg tcgttgaaga gatcaaaaag agccgcttca
    28981 taacgatgtt ggcgcatacc gatggcgttg aggcggcgaa agcgtttgtt gaatcggtgc
    29041 gggcagaaca ccccgatgcc cgccaccatt gcgtggcgtg ggtggcgggt gcgccggatg
    29101 attctcaaca gctgggtttc tctgacgacg gggagccggc gggaacggca ggtaaaccga
    29161 tgctcgccca gctaatgggc agcggcgtcg gggaaattac cgctgtggta gtgcgctact
    29221 acggcggcat attgcttggc accggtgggt tagtgaaagc gtatggcggc ggcgtgaatc
    29281 aggcgctgcg ccagctaacg acccaacgca agacgccatt aaccgaatat actttgcaat
    29341 gtgaatatag tcagttaacc ggcattgaag cgttgctggg gcagtgtgac ggcaaaatta
    29401 tcaacagtga ttatcaggca ttcgttctgc tgcgggtggc gcttccggcg gcgaaagtgg
    29461 ctgaattttc cgcaaagctg gcggatttta gccgtggttc attgcaattg ttagcgattg
    29521 aagaataatc cccacttcgt tttgcagaac taaggaagcg gcagagatgc attttcgcgc
    29581 cattacccga atcgttggac tactggtcat cttattttca gggaccatga ttatccctgg
    29641 gctggtagca ctcatctacc gggatggagc gggccgcgct tttacccaga ccttttttgt
    29701 cgccctcgcc attggctcta tgctgtggtg gccgaaccgc aaagagaagg gcgaactgaa
    29761 atcccgtgag gggtttctga tagtggtgct gttttggacc gtgctgggta gcgtcggtgc
    29821 gctccctttt atcttctcgg aaagcccgaa cctcacgatt accgatgcgt tttttgaatc
    29881 tttctctggc ctgaccacca ccggggccac tacgctggtg gggctggatt cgctccctca
    29941 tgccatcctc ttttatcgcc agatgctgca atggtttggt gggatgggga tcatcgtgtt
    30001 agcggttgcg atactgccta tcctcggcgt gggtgggatg cagctctatc gcgcagaaat
    30061 gcccggcccg ctgaaagata acaaaatgcg cccgcgaatt gcggaaacgg cgaaaaccct
    30121 gtggttgatt tatgtcttgc tgaccgtcgc ctgtgcgctg gcgttgtggt ttgccggaat
    30181 ggatgccttt gatgccatcg gccatagctt tgcgactatc gctattggcg gcttctcgac
    30241 acatgatgcc agtatcggtt atttcgacag cccgactatt aacactatca ttgctatctt
    30301 cctgctgatc tccggctgta actacggtct gcacttttca ctgttaagtg ggcgtagtct
    30361 gaaggtttat tggcgcgatc cggaatttcg catgtttatc ggcgtacagt ttacgctggt
    30421 ggttatttgt acactcgtac tgtggtttca taatgtctac agttcggcgc tgatgacaat
    30481 taaccaggcg tttttccagg tggtatcgat ggcgacaacc gccgggttta cgactgacag
    30541 cattgcccgc tggccgctct ttttgccggt actgctttta tgttcagctt ttatcggcgg
    30601 ttgcgccggg tcaacgggcg gtggcctgaa agtgatccgc atcctgctgc tgtttaagca
    30661 ggggaaccgt gagctgaaac gactggtgca tccgaacgcc gtctatagca ttaagctggg
    30721 gaatcgcgca ctgccggaac gtatcctcga agccgtttgg ggatttttct ccgcctatgc
    30781 attggtgttt attgtcagta tgctggcgat tatcgccacg ggcgtggatg acttttctgc
    30841 ctttgcctca gttgttgcga cattgaataa cctggggcca gggcttggcg tggttgctga
    30901 taactttacc agtatgaatc cggtggctaa atggatcctg attgccaaca tgctgtttgg
    30961 tcgtctcgag gtctttacat tgctggtgct ctttaccccg actttctggc gtgaatgatg
    31021 gagtaatacg tgaaaacatt aattcttttc tcaacaaggg acggacaaac gcgcgagatt
    31081 gcctcctacc tggcttcgga actgaaagaa ctggggatcc aggcggatgt cgccaatgtg
    31141 caccgcattg aagaaccaca gtgggaaaac tatgaccgtg tggtcattgg tgcttctatt
    31201 cgctatggtc actaccactc tgcgttccag gaatttgtca aaaagcatgc gacgcgactg
    31261 aattcgatgc cgagcgcctt ttattccgta aacctggtgg cgcgcaaacc ggagaagcgt
    31321 actccacaga ccaacagcta cgcgcggaag tttctgatga actcgcaatg gcgtcccgat
    31381 cgctgtgccg tcattgccgg ggcgctgcgt tacccacgtt atcgctggta cgaccgtttt
    31441 atgatcaagc tgattatgaa gatgtcaggc ggtgaaacgg atacgcgcaa agaagttgtc
    31501 tataccgatt gggagcaggt ggcgaatttc gcccgagaaa tcgcccattt aaccgacaaa
    31561 ccgacgctga aataagcata aagaataaaa a
//
LOCUS       DAPGWB010000039        31562 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.039, whole genome shotgun sequence.
ACCESSION   DAPGWB010000039 DAPGWB010000000
VERSION     DAPGWB010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 31562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31562
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.039"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(154..441)
                     /locus_tag="RHX79_001738"
     CDS             complement(154..441)
                     /locus_tag="RHX79_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebO family protein"
                     /protein_id="HDV2196924.1"
                     /translation="MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIE
                     LLEALLDQQKRQNALLRRLCEANEPEKADKKTVESQKSVEDEDIIRLVAER"
     gene            complement(516..659)
                     /gene="mgrB"
                     /locus_tag="RHX79_001739"
     CDS             complement(516..659)
                     /gene="mgrB"
                     /locus_tag="RHX79_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP/PhoQ regulator MgrB"
                     /protein_id="HDV2196925.1"
                     /translation="MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQF
                     IPW"
     gene            818..1057
                     /locus_tag="RHX79_001740"
     CDS             818..1057
                     /locus_tag="RHX79_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196926.1"
                     /translation="MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLT
                     ARGTSTVQYLHTKSGFLGITDCPLLRKSNIVVDNG"
     gene            complement(1200..1991)
                     /gene="kdgR"
                     /locus_tag="RHX79_001741"
     CDS             complement(1200..1991)
                     /gene="kdgR"
                     /locus_tag="RHX79_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator KdgR"
                     /protein_id="HDV2196927.1"
                     /translation="MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMS
                     KSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISR
                     LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV
                     KQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFG
                     VVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQMGYHDYPF"
     gene            2168..3541
                     /locus_tag="RHX79_001742"
     CDS             2168..3541
                     /locus_tag="RHX79_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2196928.1"
                     /translation="MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIAT
                     DLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSD
                     SLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIA
                     AAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLL
                     ITALSGFAQGQSLTLIAAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICT
                     SVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAG
                     LLGALGLFIMAAGLFSLVLLPASPADINIIWPMILCGAGFGLFQSPNNHTIITSAPRE
                     RSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLMAAAILAVIAACVSGLRI
                     TQPRSRA"
     gene            complement(3587..4468)
                     /gene="htpX"
                     /locus_tag="RHX79_001743"
     CDS             complement(3587..4468)
                     /gene="htpX"
                     /locus_tag="RHX79_001743"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014229823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HDV2196929.1"
                     /translation="MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGF
                     GGSFVSLLMSKWMALRSVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAP
                     DINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVN
                     TFVIFISRILAQLAAGFMGGNRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFS
                     RHREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTH
                     PPLDKRIEALRTGEYLK"
     gene            complement(4660..6708)
                     /gene="prc"
                     /locus_tag="RHX79_001744"
     CDS             complement(4660..6708)
                     /gene="prc"
                     /locus_tag="RHX79_001744"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HDV2196930.1"
                     /translation="MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATV
                     SERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKSELGD
                     ELRSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEA
                     ELNALWDSKVKFDELSLKLAGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAF
                     AREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAI
                     SVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLT
                     RERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDL
                     RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFS
                     ASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI
                     QKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTA
                     FGPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRL
                     ARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK
                     "
     gene            complement(6728..7426)
                     /gene="proQ"
                     /locus_tag="RHX79_001745"
     CDS             complement(6728..7426)
                     /gene="proQ"
                     /locus_tag="RHX79_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707288.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HDV2196931.1"
                     /translation="MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVD
                     RVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQ
                     LEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK
                     PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLN
                     SGMSLIVRAEHLVF"
     gene            complement(7523..8020)
                     /gene="msrC"
                     /locus_tag="RHX79_001746"
     CDS             complement(7523..8020)
                     /gene="msrC"
                     /locus_tag="RHX79_001746"
                     /EC_number="1.8.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine (R)-S-oxide reductase"
                     /protein_id="HDV2196932.1"
                     /translation="MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNW
                     AGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDA
                     ASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFF
                     ASVAG"
     gene            8150..9433
                     /gene="yebS"
                     /locus_tag="RHX79_001747"
     CDS             8150..9433
                     /gene="yebS"
                     /locus_tag="RHX79_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity lipid transport subunit YebS"
                     /protein_id="HDV2196933.1"
                     /translation="MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEIN
                     SHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANV
                     MQGIWQMTKQGDTITGAMVFFCVIGAPLILVSSIAYLWFGNRLGMNLRPVLLMLERLK
                     EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERYY
                     PQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVL
                     LLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFT
                     LLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAA
                     FYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD"
     gene            9402..12035
                     /gene="yebT"
                     /locus_tag="RHX79_001748"
     CDS             9402..12035
                     /gene="yebT"
                     /locus_tag="RHX79_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416348.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding membrane homeostasis protein YebT"
                     /protein_id="HDV2196934.1"
                     /translation="MSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQD
                     RGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDAL
                     REETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGD
                     LMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKG
                     SRFWNVSGVDANVSVSGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAH
                     SQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTL
                     LRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDV
                     LTLTLTAPESYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSK
                     FVVNSRVDVKVGLDGVEFLGASASEWINGGIRILPGDKGEMKASYPLYANLEKALENS
                     LSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKPEYRNL
                     LTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILY
                     ASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLY
                     PEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYINVEPGRGNPRRDFELQEATIT
                     DSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY
                     QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGK
                     HFLLQESEPKEWREWGTALPK"
     gene            12115..13554
                     /gene="rsmF"
                     /locus_tag="RHX79_001749"
     CDS             12115..13554
                     /gene="rsmF"
                     /locus_tag="RHX79_001749"
                     /EC_number="2.1.1.178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1407)-C(5))-methyltransferase
                     RsmF"
                     /protein_id="HDV2196935.1"
                     /translation="MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVN
                     TLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEA
                     SSMLPVAALFADDNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHA
                     NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN
                     QEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGD
                     LFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKD
                     REAGQIRQAAAGVGLNWDENLRLWQRDKEVWLFPVDIEALIGKVRFSRLGIKLAETHN
                     KGYRWQHEAVIALASPDNVNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPI
                     GLAKRIGSRLKNSYPRELVRDGKLFTGNA"
     gene            13672..13908
                     /locus_tag="RHX79_001750"
     CDS             13672..13908
                     /locus_tag="RHX79_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1480 family protein"
                     /protein_id="HDV2196936.1"
                     /translation="MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAW
                     DAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA"
     gene            14013..14204
                     /locus_tag="RHX79_001751"
     CDS             14013..14204
                     /locus_tag="RHX79_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebW family protein"
                     /protein_id="HDV2196937.1"
                     /translation="MFALVLFVCYLDGGCEDIVVDVYNTEQQCLHSMSDQRIRQGGCF
                     PIEDFIDGFWRPAQEYGDF"
     gene            complement(14205..14861)
                     /gene="pphA"
                     /locus_tag="RHX79_001752"
     CDS             complement(14205..14861)
                     /gene="pphA"
                     /locus_tag="RHX79_001752"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HDV2196938.1"
                     /translation="MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPW
                     RDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGD
                     WFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQ
                     VLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIANLHYIDTGAVFGGELTLVQLQ
                     "
     gene            complement(15257..15598)
                     /locus_tag="RHX79_001753"
     CDS             complement(15257..15598)
                     /locus_tag="RHX79_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebY family protein"
                     /protein_id="HDV2196939.1"
                     /translation="MMKKSILTFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEV
                     MLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTKAQPISVIQIDDPNNPGEKMSL
                     APFIERAEKLC"
     gene            complement(15611..16483)
                     /gene="copD"
                     /locus_tag="RHX79_001754"
     CDS             complement(15611..16483)
                     /gene="copD"
                     /locus_tag="RHX79_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
                     /protein_id="HDV2196940.1"
                     /translation="MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFL
                     RLQQHAAVWSLISATAMLAVQGGLMGTGWADVFSPNIWQAVLQTQFGGVWLWQIVLAL
                     VTLIVALMQPRNMPRLLFMLTTAQFILLAGIGHATLNEGVTAKIHQTNHAIHLICAAA
                     WFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPT
                     LTTYWGQLLLLKAILVMIMVVIALANRYVLVPRMRQDEDRAAPWFEWMTKLEWAIGAV
                     VLVIISLLATLEPF"
     gene            complement(16487..16861)
                     /gene="yobA"
                     /locus_tag="RHX79_001755"
     CDS             complement(16487..16861)
                     /gene="yobA"
                     /locus_tag="RHX79_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopC domain-containing protein YobA"
                     /protein_id="HDV2196941.1"
                     /translation="MTSTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAA
                     PQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYI
                     VDWHVVSVDGHKTKGHYTFSVK"
     gene            17000..17230
                     /gene="holE"
                     /locus_tag="RHX79_001756"
     CDS             17000..17230
                     /gene="holE"
                     /locus_tag="RHX79_001756"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit theta"
                     /protein_id="HDV2196942.1"
                     /translation="MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQ
                     PEHLRSWFRERLIAHRLASVNLSRLPYEPKLK"
     gene            17332..17988
                     /locus_tag="RHX79_001757"
     CDS             17332..17988
                     /locus_tag="RHX79_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HDV2196943.1"
                     /translation="MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPS
                     LSLLGCDYSRRALPAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPW
                     RKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARR
                     LQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQSWQGDIIPLR
                     "
     gene            18012..18674
                     /gene="exoX"
                     /locus_tag="RHX79_001758"
     CDS             18012..18674
                     /gene="exoX"
                     /locus_tag="RHX79_001758"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease X"
                     /protein_id="HDV2196944.1"
                     /translation="MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPIS
                     PQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKL
                     ARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQ
                     MADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLE
                     NT"
     gene            complement(18671..20731)
                     /gene="ptrB"
                     /locus_tag="RHX79_001759"
     CDS             complement(18671..20731)
                     /gene="ptrB"
                     /locus_tag="RHX79_001759"
                     /EC_number="3.4.21.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase B"
                     /protein_id="HDV2196945.1"
                     /translation="MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQEN
                     SYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQS
                     AFSEEWDEWETLLDANKRAAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNL
                     DTGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHAIGTPASQDKLIYE
                     EKDDTYYVSLHKTTSKHYVVIHLASATTSEVRLLDAEMADAEPFVFLPRRKDHEYSLD
                     HYQHRFYLRSNRHGKNFGLYRTRMRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQ
                     RGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETARLRYGYSSMTTPDTLFELD
                     MDTGERRVLKQTEVPGFDAANYRSEHLWIVARDGVEVPVSLVYHRKHFRKGHNPLLVY
                     GYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDY
                     LDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTML
                     DESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWE
                     PAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLVALAQGTLPA
                     TPAD"
     gene            complement(20940..21599)
                     /locus_tag="RHX79_001760"
     CDS             complement(20940..21599)
                     /locus_tag="RHX79_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HDV2196946.1"
                     /translation="MANWLNQLQSLLGQSSSSTSSSADQGLGKLLVPGALGGLAGLLV
                     ANKSARKLLTKYGTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERT
                     ERLILALVFAAKSDGHIDAKERVAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATG
                     VRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLA
                     E"
     gene            complement(21926..22282)
                     /locus_tag="RHX79_001761"
     CDS             complement(21926..22282)
                     /locus_tag="RHX79_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310584.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YebF"
                     /protein_id="HDV2196947.1"
                     /translation="MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIA
                     ASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHY
                     QVSVDCKAGMAEYQRR"
     gene            complement(22349..22639)
                     /gene="yebG"
                     /locus_tag="RHX79_001762"
     CDS             complement(22349..22639)
                     /gene="yebG"
                     /locus_tag="RHX79_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein YebG"
                     /protein_id="HDV2196948.1"
                     /translation="MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTN
                     SPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA"
     gene            22773..23951
                     /gene="purT"
                     /locus_tag="RHX79_001763"
     CDS             22773..23951
                     /gene="purT"
                     /locus_tag="RHX79_001763"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HDV2196949.1"
                     /translation="MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY
                     ADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVV
                     PCARATKLTMNREGIRRLAAEELQLPTSTYRFADSESLFREAVAAIGYPCIVKPVMSS
                     SGKGQTFIRSAEQLAQAWEYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFC
                     APVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCGDEVI
                     FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQN
                     VTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQG
                     "
     gene            complement(24007..24648)
                     /gene="kdgA"
                     /locus_tag="RHX79_001764"
                     /gene_synonym="eda"
     CDS             complement(24007..24648)
                     /gene="kdgA"
                     /locus_tag="RHX79_001764"
                     /gene_synonym="eda"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HDV2196950.1"
                     /translation="MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVL
                     EVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLK
                     AATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCP
                     TGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL"
     gene            complement(24685..26496)
                     /gene="edd"
                     /locus_tag="RHX79_001765"
     CDS             complement(24685..26496)
                     /gene="edd"
                     /locus_tag="RHX79_001765"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HDV2196951.1"
                     /translation="MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGN
                     LAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVG
                     QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG
                     LTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP
                     GTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWM
                     PIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMA
                     RLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGEL
                     DWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVV
                     FESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVT
                     DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARE
                     PHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF"
     gene            complement(26731..28206)
                     /gene="zwf"
                     /locus_tag="RHX79_001766"
     CDS             complement(26731..28206)
                     /gene="zwf"
                     /locus_tag="RHX79_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HDV2196952.1"
                     /translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTR
                     IIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFNRL
                     GAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEIN
                     DQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG
                     IEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR
                     SNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY
                     LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
                     LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD
                     SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE"
     gene            28544..29413
                     /gene="hexR"
                     /locus_tag="RHX79_001767"
                     /gene_synonym="yebK"
     CDS             28544..29413
                     /gene="hexR"
                     /locus_tag="RHX79_001767"
                     /gene_synonym="yebK"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HDV2196953.1"
                     /translation="MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEA
                     NVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESA
                     MATLDHVRHSLDKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS
                     DDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLARE
                     ATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKES
                     RFDKQLLNLSDDR"
     gene            29541..30983
                     /gene="pyk"
                     /locus_tag="RHX79_001768"
     CDS             29541..30983
                     /gene="pyk"
                     /locus_tag="RHX79_001768"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDV2196954.1"
                     /translation="MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP
                     EDHKMRADKVREIAARLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK
                     GEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK
                     GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA
                     KIVAKVERAEAVCSQDAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQL
                     NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM
                     ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA
                     LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGY
                     LMSGDLVIVTQGDVMSTVGSTNTTRILTVE"
     gene            complement(31043..31519)
                     /locus_tag="RHX79_001769"
     CDS             complement(31043..31519)
                     /locus_tag="RHX79_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001441588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDV2196955.1"
                     /translation="MDREPTFGMSKALAQQLELDVTNIVASDDMYHVYAIEPDSAINI
                     TKRFAKNLKIYNLPGIQFYGDRARIVRTIGIGAGCFCDPIQYMEYQADYYITINDSIK
                     TWVQTQYSKDSGLPMAVIGYSVAEEAGMRRLASYLDLHSGYPCIHFTAGCDYDWIE"
BASE COUNT         7665 a         8107 c         7718 g         8072 t
ORIGIN      
        1 tttctgatat cccgttacgc aaataaataa tatgataatt atttgaagtc agaccagagt
       61 tttaatttga agcagttgca ccatggcagt gcgtataatc aggatgaatt gagtaaccct
      121 tcaacgacgg ggttactcaa gattgaggaa ggattatcgt tcggcgacca gacgaataat
      181 atcttcgtct tcaaccgatt tttgactctc aacggtcttt ttatctgctt tctcaggttc
      241 gtttgcttcg cacaaacgac gtaacagtgc attttgacgt ttttgctgat ccagcaacgc
      301 ctcaagcagt tcaatctgtt cgttagtccg agaactggca cgattgataa aaaaccacaa
      361 gatgagcccg ataagaagaa ccaccaccga tacaaccaaa gacgcaatgt tcatcacgcc
      421 tgaatttaca acttcgttca tttcaccacc tctgagtaga ggcgctattc taccactgct
      481 ggagaggaag aaaatctagt gctgaaaaaa tgatatcacc acgggataaa ctggttaatg
      541 gcacaaattc cgctgaaaaa ttgtacatcc tgatcgcaca tcatgttgaa tacctgcgcc
      601 caaagcagca agcaagccaa caccacgaca accagaacga cccatcgaaa ctttttcact
      661 ccaatctccg cttcacctac cttatgtcat taaactagca tgcgttagtt aaacagcgcc
      721 taactatgtc gatattcgtg ctttttcgga atgagtagct tgcttcagcg catattgccg
      781 ctacgattaa gcgaacataa aaagagaaga ggttgtaatg cgattcatca ttcgcacagt
      841 tatgctgata gcactggtat ggataggatt attactcagc ggatatggcg ttttgattgg
      901 aagcaaagag aatgccgcag gattaggttt gcaatgtacc tatctgactg ccagaggcac
      961 cagcacggta caatacttgc acactaaaag tggtttcttg gggataacag attgcccact
     1021 gttacgtaaa agcaatatcg tggtcgataa tggttaaggg taataaataa ccagattctc
     1081 actcatgagt aaaatattct tatagcaagc gcgtttaata taacgcacct tcaactttat
     1141 ttttctcatg ctaaataaag aacctgtctg tttgatattc cgacaggttc ttactctcat
     1201 cagaacggat agtcgtgata acccatttgg gcagaaattt tgcgcgctgc ggtatgcaac
     1261 attgcgacat attcctgtaa acgctcttca gagaaacgca acgtcgggaa ggagatgctc
     1321 aaaccggcaa tgaccacgcc aaagcgatca aataccggta ccgcaatgca tcgcagccct
     1381 tcttcctgct cttcgttatc ttcgccatac ccctgctcgc gcacctggtc cagaacgggt
     1441 aataacgctt ctgtactggt gatggtccgc tcggtactgc gtttatactc cacgccctca
     1501 agaatttgct tcacttcatc gcgatcgcgc catgccagca gtaccttacc aatcgcggtg
     1561 ctgtacagcg gattacgacg cccaatccgt gaatacatgc gcaaattgta catagagtca
     1621 attttgtgaa tgtaaacaat actgtcttcg tccagtgcgc cgaggtggat agtttctttg
     1681 gtcaggcggg agatctcacg catctggata tctgcgctac gaattaaatc gacgttttgt
     1741 aacgcgcgag cgcccagttc aaacaatttc agggtcaggg aatatttctc cgactcccct
     1801 tcctgcgcca cataacctaa ggttttcatg gtctgtaaaa agcgataaac ggtgcttttt
     1861 gacatcatga cgcgctgcga cagctcggtt atccctattt cgcgctcttc acccagcgcc
     1921 tgcaaaatgc caaaaacttt tagcacggaa gatacagaat caggctgttt atccagatct
     1981 gcgttagcca tttatcacct cattgcgagt gttttataaa aatcagaact gttttttatt
     2041 ataatttcgc accagggtgg tcgcaatcca tcttttgccg gttagttaca attctgcgac
     2101 atccaccgtg aatatcagtg ctagaatcat acccctgttg attattcacc aaagatataa
     2161 aattcctatg ccaaaagttc aggccgacgg cctgccattg ccccagcgat acggtgcgat
     2221 attaaccatt gtgattggta tttcgatggc tgtccttgac ggcgcaatcg ccaacgtcgc
     2281 cctgccaaca atcgccacgg accttcatgc cacgccagcc agttccatct gggtagtgaa
     2341 cgcctatcaa atcgccattg tcatctccct gctctcgttt tcgtttctgg gcgatatgtt
     2401 tggctatcga cgtatttata aatgcggtct ggtcgttttt ctgttgtctt cactgttctg
     2461 cgccctttct gattcgctgc aaatgctcac ccttgcgcgt gtcatacaag gtttcggcgg
     2521 tgcagcgttg atgagcgtta ataccgcact tatccgcctg atctatccac aacgttttct
     2581 ggggagaggg atgggcataa actcgtttat tgttgccgtc tcttctgctg ccgggccgac
     2641 aattgctgca gcaatcctct ccatcgcatc ctggaaatgg ttatttttaa tcaacgtacc
     2701 gttaggtatt atcgccctgc ttctggcgat gcgttttctg ccacccaatg gttctcgcgc
     2761 cagtaaaccc cgtttcgacc tgcccagcgc cgtgatgaac gcgttaacct tcggcctgct
     2821 tatcactgcg ttgagtggtt tcgctcaggg gcaatcgctg acgttaattg ctgcggaact
     2881 ggtggtaatg gttgttgttg gtattttctt tattcgccgc cagctttctc ttcccgtacc
     2941 gctgctaccg gtggatttac tgcgtatccc gctgttttca ctttctattt gcacatctgt
     3001 ttgctctttc tgcgcacaaa tgctggcaat ggtttccctg cccttttacc tgcaaaccgt
     3061 gctcgggcgt agtgaagtcg aaacaggttt acttctgaca ccgtggccgt tagcaacgat
     3121 ggtgatggct ccgctggcag gctatttgat tgaacgcgta catgcaggat tgctgggtgc
     3181 tctagggttg ttcatcatgg ctgcggggct tttttccctg gttctgctgc ccgcgtcacc
     3241 tgcggatatc aatattatct ggccgatgat cttatgtggc gctggatttg gcttgttcca
     3301 gtcacccaat aaccacacca ttattacctc cgctcctcgc gaacgtagcg gtggagccag
     3361 tggcatgtta ggaacggctc gtctactggg tcagagtagc ggcgcggcac tggtggcgct
     3421 gatgctaaat cagttcggtg ataatggtac gcacgtttcg ctgatggctg cggctattct
     3481 ggcagtgatt gctgcctgtg tgagtggttt acgtatcact cagccacgat ccagggcata
     3541 aaaaaagcgc gtcgatcaga acgcgctttt tagtatttac ttcatattac ttcaggtatt
     3601 cacccgtacg cagagcttca attcgtttat ccagcggcgg gtgagtcatg aacaactcac
     3661 tgagcgattt cgacttaccg ttaatgcaga aagccatcat gctggttgct tcttgcggtt
     3721 catagctggt tttcaggcgc tgcagcgcgg caatcatttt ctcgcgacca accagttttg
     3781 ccgaaccggc atcagcatgg aattcacgat gacgcgagaa ccacatggtg ataatgctcg
     3841 ccagaatacc aaacaccagt tccagaaccg ttgcaaccgc aaagtagatc agcgggttgc
     3901 cgttgctctc ttcaccttca tcacgatttc cgcccataaa acccgcggca agctgcgcca
     3961 gaatacggga aataaagata acgaaggtgt tcaccacgcc ctgaatcagc gtcatggtga
     4021 ccatatcacc attggcgatg tggctgattt cgtgagcaat taccgcctcg gcttcatccg
     4081 ggctcatgtt ctgcagcaaa ccggtgctga cagcaaccag agaggcatca cggcgcgcac
     4141 cggttgcaaa agcgttgatg tccggcgcat ggtagatagc cacttgcggc atagcgatcc
     4201 ctgcctgacg agcctgggtt gctacagtat taaccagcca acgttccctt tcgttacgcg
     4261 gttgctcgat cacttccccg ccaacagatc gtaatgccat ccatttggac atcagaagcg
     4321 aaacgaagga accaccaaaa ccgaacagca aggccatgat catcagcccc tgaacgctgc
     4381 tcgactgtat ccctgtcagg ctcagtacca gcccgaaaac gaccattacg gccaggttcg
     4441 ttagcaggaa gagcgcgatt cgcatcataa ttttcttttt acctcagttt aacaaaacgc
     4501 aatatgcgat acccacatcg tatgggttac gcgactattt tcaagtctgg atagtgcgta
     4561 agtcaccaga aagacacaac tttacatttt gtagcatctg atttacggca tcttgccgct
     4621 gttaaaaaat caggcacaat ttcttgtgcc tgattgatat tacttgacgg gagcgggttg
     4681 ttccgcgggt ctggcttttt caagcttcgc cagatcgagt gcgatattca ccgtctcatc
     4741 cagataagga tccggctcct ggtaatcttt aggtagatca tccagcttct tcaactccgg
     4801 tttaccttcg cgtttaaagc gttcgttcaa acgcgccaga cgcgtcgcat catcttcatt
     4861 attctctttc tcacgcacag cgtagttcag agaaacgata ttgcgcttgt ccttcatagc
     4921 gttgaagcgc gcgatatcct tcatgatgtt ctggaactca ggatctttcg cgatacgcgc
     4981 attatgttcc ttcagcagct ccggcccaaa ggccgttaaa tcgcctgatt tcacataagt
     5041 cgcggcatca atgctatccc acggcagcgc gttatcttcg aatttctcac ccgtttccgt
     5101 ttcttcatta cccgtcggca tgatgatgtc tggcgttacg cctttacgtt gcgtactgcc
     5161 gccgttaacg cgatagaatt tctggatcgt gtactgcaca gaacccagcg ctggccattc
     5221 aggacgtaac atctgatcgt aaatacggtt caatgaacgg tattgctgaa cggtgccttt
     5281 accaaacgtc ggttcaccca caaccagcgc acgaccgtaa tcctgcattg ccgcggcaaa
     5341 gatttctgaa gccgaagcac tgaaacggtc aaccagtacc accagcgggc ctttatagaa
     5401 cacctgcccg tcggtatcgc tgtcttcacg aaccttgccg ttgttatcgc ggacctgaac
     5461 aatgggaccc gcaggaataa acagacctga gagcgatacc gcttcggtca acgccccacc
     5521 gccattgcta cgcaggtcga tgatcacact gctgacattc tgtttttcca gtttctgcag
     5581 ttgaactttg acatcgtctg tcaaacccac atagaagccc ggaatatcca gcacgccgac
     5641 tttctcttta ccgacggtct tcaccgacat tttaaccgcg cggtcttcga gacgaatacg
     5701 ttcacgggtc aatgttacag tgcgggtctt ggtcccttta ccagcaggta aaatttccag
     5761 acgaacttta ctgcccttcg gccctttaat taaggcaacc acatcatcaa gacgccagcc
     5821 aatcacgtca accatcggct tgcctgtttg accaacaccg acaattttgt caccaacgct
     5881 gatagcttta ctcttcgctg ccggaccacc tgccaccatc gaattgataa cggtgtagtc
     5941 atcatccatt tgcagcactg cgccaatacc ttccagcgac aaactcattt cagtgttgaa
     6001 ctgttcggta ttacgcgggg aaagatagtt ggtatgcggg tcgatttcac gcgcaaacgc
     6061 cgtcattgcc agcgagaaaa catcttcgct gttggtttgc gccagacgac gaatggcaaa
     6121 tttgtagcgg cgtgtcaggg tttcacgaat ttctttatcc gtttttcctg ccagcttcag
     6181 gcttaactcg tcgaatttga ctttactgtc ccacagcgcg ttcaactcag cctcgttttt
     6241 cggccagggc gctttgctgc ggtcaaggtt ataagtgtcg ttgccggtga aatccatcgg
     6301 cttttccagt accgacaaag cgtactggta acgctcaaaa cggcgctttt gcgccagatt
     6361 gtagagatcg tagaaaacgt cgagtttgcc tgaacgcagt tcatcgccta actcgctttt
     6421 ctttttcgcg aactgttcaa catcgcttgc cagcagcacg ttgtggctgt aatcgagcag
     6481 attcaggtag cggtcaaaga ttttggccga aaatgcctga tcgaggtcga actggcgata
     6541 atgagaacgg gtgaagcgcg acgttacgcg ctcacttacc gtcgcatgct gcgtctcttc
     6601 ctttaatacc ggaatttgat cagcacgcgt gatatcttct acagcgaagg tctggcctgc
     6661 tattgcaagc aggccagcta acgcggtaag cctaaaaaac atgttcatgc ctggcccggc
     6721 ctccgtttca gaacaccagg tgttctgcgc gcacaatcaa agacataccc gaattcagct
     6781 ggacgcggac gccgtctttg gtgatttcta atacggtggc atccatcgcg ttttgacccg
     6841 ctttcacctt cagagcttgt ccgacagtca gagctgaaat gtcagaaacc ggggtgtgct
     6901 gttcttcgcg aggtgctttt actgtttttg gcgctttctc taccggcttt tgcgcacgag
     6961 gtttacgttc agcgccttct ttgcggcgtg gcgtggtcgg acgtggcttg cgttcgcggc
     7021 gcggtgcgtc ttctttctca ccagcagctg cggcagcttc gcgttttttc gcttgctgtt
     7081 cagcacgctg tgcctgaaca cgcgctttcg cttcttcaag ctgcttgcga gcatgctcta
     7141 catgttgctc atccagctca ccgcatgggt tgccgtcaag atcgacacgc gttgcgccgg
     7201 gtttaacacc gtaaagataa cgccagctcg aagtgtagag acgtaaagcg gatcgtaatt
     7261 gcgttttgct caggttcatt tccccggcaa cacgatcgac caaatcctga aaaataccga
     7321 ttttcagcgg acgcgcttca ccttccgcac tgaaacagtg gggaaaacgt tcggccagaa
     7381 acgcgattac ttctttactg ctattcaact taggttgatt ttccatgaaa tttcctgatt
     7441 acaacggacg tagccaacaa gcgcaggcat gaacaggcgt cattataatg acgctaccag
     7501 taaatgctac gttatccgtt gattatcctg cgacgctcgc aaagaatttt ttgtaatccg
     7561 tcgttgcaag cactttttca agctgtgcca caagctgacg taagccttgc tcgtcctcgt
     7621 ctgtaaagcg accgaagacg gtactatcga tgtcaagaac accaataatc tgatttttca
     7681 ccaccagcgg cagaacaatt tcagaattac tcgccgcatc acaggcaata tgcccgtcaa
     7741 acgcgtgaac atcctcgata cgctgcactt gattgcgggc aaccgcagtg ccgcacaccc
     7801 cgcgcccgac gggtatccgg acacaggcaa ttttgccctg aaatggtcct agtaccagtg
     7861 tatcgtcctc aagcaaataa aaacctgccc agtttacgtc agtgagacgc tcgtataaca
     7921 acgcactggt gttcgcaagc gttgccagaa aactggtttc tcccgccatc agcgcgttaa
     7981 agtcgcgatt taaatccgcg taaaattctg ttttgttcat tatataatca cttggttgtc
     8041 ttacctggaa ctgccagcct attaaaataa gcattaaatg cgttaatgct caagatcatt
     8101 ccaatcatgg gttaatatta atgttaattc ttattacatt tggcacgtca tggctcttaa
     8161 cacaccacaa attacgccga caaaaaagat aacagtgagg gcaatcggcg aggaactgcc
     8221 gcgtggtgat taccaacgtt gcccgcaatg tgacatgctg tttagcctgc ccgagataaa
     8281 ttctcatcag agtgcctatt gtccgcgctg tcaggcaaaa attcgcgacg ggcgcgactg
     8341 gtcgctaacg cgcctggcgg caatggcttt caccatgctg ttgctgatgc cgtttgcctg
     8401 gggcgaaccg ctgttgcata tctggctgtt aggtattcgt atcgacgcca acgtcatgca
     8461 aggcatctgg caaatgacca aacagggcga tacgataacg ggggcgatgg tctttttctg
     8521 cgttattggt gcccccctca ttctggtgtc ctccatagca tatttatggt ttggtaaccg
     8581 actgggaatg aatttacgtc cggtactgct gatgcttgag cgtcttaaag agtgggtaat
     8641 gctggatatc tacctggtcg gcattggcgt tgcttctata aaggtacagg attatgccca
     8701 tatccaggct ggtgtcggct tgttctcttt tgtggcgttg gtgattttaa cgacggtgac
     8761 gttgtcacat cttaatgttg aggagctgtg ggagcgatat tatccgcagc gccccgctac
     8821 gcgtagggac gagaaacttc gtgtctgtct tgggtgccat tttaccggct atcctgatca
     8881 gcgtggtcgc tgcccgcgtt gccatatccc gctacgcctg cgtcgccgtc atagtctgca
     8941 aaaatgctgg gcggcgctgt tagcgtcaat cgttttgttg ttaccagcca acctattgcc
     9001 tatttctatc atttatctga acggaggacg gcaggaagat acaattcttt ccggaattat
     9061 gtcgctggca agtagcaaca ttgcggttgc gggaatcgtg tttatcgcca gtattctggt
     9121 accgtttact aaagtgatcg tcatgttcac tttactgttg agcattcatt ttaaatgcca
     9181 gcaaggttta cgcacacgca ttctgttact gcggatggtg acctggattg gacgctggtc
     9241 gatgctcgac ctgtttgtca tatctttaac catgtcgctg attaatcgcg atcagatcct
     9301 cgcttttact atgggaccgg ctgcgtttta ttttggcgca gccgtaattt tgactattct
     9361 tgctgtggaa tggctggaca gccgcttact ttgggatgca catgagtcag gaaacgcccg
     9421 cttcgacgac tgaagcgcag attaaaaata aacgccgtat ctcacctttc tggctgctgc
     9481 ctttcatcgc gctaatgatt gccggttggc tgatttggga cagttatcag gaccggggta
     9541 ataccgtcac catcgacttt atgtcggcgg atggtattgt tccgggccgt acgcctgttc
     9601 gttatcaggg cgttgaagtc ggaacagtgc aggatatcag cctcagcgac gatcttcgta
     9661 agattgaagt caaggtcagc atcaagtccg atatgaaaga tgcgctgcgc gaagagactc
     9721 aattctggct ggtgacgcca aaagcatcgt tggcaggtgt ctccgggctg gacgccctcg
     9781 tcggtgggaa ctatatcggc atgatgccgg gtaaaggtaa agagcaggat cactttgtcg
     9841 cactcgatac ccaaccgaag tatcggctgg ataacggcga tctgatgatc cacctgcaag
     9901 ctcccgatct cggttcgctg aacagcggtt cattggtcta tttccgcaag atcccggtgg
     9961 gaaaagtcta cgactatgcc atcaatccca acaagcaagg cgtggtgatt gatgtcctga
    10021 tcgagcggcg ttttaccgat ctggtgaaaa aaggtagccg tttctggaac gtttccggcg
    10081 ttgatgccaa cgtcagtgtc agtggcgcga aggtgaaact ggaaagtctg gcggcactgg
    10141 ttaacggtgc gattgccttc gattcacctg aagagtcgaa acctgccgag gcggaagata
    10201 cctttggtct gtatgaagat ctggcccaca gccagcgtgg cgtaataata aaactggaac
    10261 tgccgagtgg ggccggattg accgccgact cgacgccgtt aatgtatcag gggctggaag
    10321 tcggacagct aactaaactg gatttaaatc ctggtggtaa agtcactggg gaaatgacag
    10381 ttgatcccag cgtcgttacc ctgcttcgtg aaaatacccg catcgaatta cgtaatccga
    10441 aattatccct tagcgatgcc aatctcagcg ccctgctgac tggcaaaacc ttcgagttgg
    10501 tacccggcga tggcgagcca cgcaaagagt tcgttgttgt gccaggcgaa aaagcactgc
    10561 tgcatgaacc tgatgttctg acgctgaccc tgaccgcgcc ggaaagttac ggtattgatg
    10621 ctggtcagcc gctcattctt cacggcgtgc aggtaggcca ggttatcgat cgtaaactca
    10681 ccagcaaagg cgtcaccttt accgtcgcca tcgagcctca gcatcgagaa ctggtaaaag
    10741 gcgatagcaa atttgtcgtc aacagccgtg tcgacgtgaa ggtggggctg gatggcgttg
    10801 agtttctcgg tgccagcgcc tcagaatgga ttaacggcgg gatacgtatt ctgccgggcg
    10861 ataaaggcga gatgaaagcc agctatccac tgtatgccaa tctggaaaaa gcgctggaga
    10921 acagccttag cgatttaccc accacaaccg tgagtttgag tgcagagacg ctgccggatg
    10981 tgcaggcagg atcggtagtg ctctaccgta aatttgaagt tggtgaagtt attaccgtcc
    11041 gtccgcgagc taacgcgttt gatatcgatc tgcatattaa gccggagtat cgcaaccttc
    11101 tgaccagcaa tagcgtgttc tgggcagaag gcggggcgaa agttcagctg aatggtagtg
    11161 gcctgaccgt acaggcatcc ccgctctcca gagcattaaa gggagccatt agcttcgata
    11221 acctcagcgg tgccagcgcc agtcagcgta aaggcgacaa acgaattctg tatgcttccg
    11281 aaacagcggc ccgtgcggtt ggtgggcaga ttacgcttca cgctttcgat gccggaaaac
    11341 tggcggtcgg gatgccaatt cgctatctcg gtattgatat cgggcaaatc cagacgctgg
    11401 atctgattac cgcgcgcaat gaagtacagg caaaggcggt gctctatccg gagtatgtcc
    11461 agaccttcgc ccgcggcggt acgcgcttct cggtggtcac accgcaaatt tcagccgcgg
    11521 gcgttgagca tctagatact atcctccagc cgtatatcaa cgtcgaacca ggccggggca
    11581 atcctcgccg cgactttgaa ttacaagagg ccaccattac tgattcgcgt tacctggatg
    11641 gcttaagcat tattgttgaa gcgccggaag ccggttcgtt aggtattggt acgcctgtgc
    11701 tgttccgtgg tctggaagtc ggtacggtta caggaatgac gctggggaca ttgtcagatc
    11761 gcgtgatgat tgcgatgcgc atcagtaaac gctatcaaca cctggtgcgt aacaattccg
    11821 tcttctggtt ggcatcgggt tacagtctgg actttggtct gacgggcggc gtagtgaaaa
    11881 ccggcacctt taaccagttt atccgtggcg gcatcgcctt cgccacgcct ccgggtacgc
    11941 cactggcacc gaaagcccag gaaggcaaac acttcctgtt gcaggaaagt gaaccgaaag
    12001 agtggcgtga atggggaact gcgcttccca aataatgccc actgctccgg cgtgcctgcg
    12061 ccggagcgtt tatgctaaac tgcgcgcctg tttttttgcc agtggtacat gctcgtggcc
    12121 caacacaccg tttatttccc ggacgccttt ctgacacaaa tgcgcgaagc gatgccttcg
    12181 acgctctcat ttgatgattt tcttgccgcc tgtcagcgcc cgttgcgccg cagcattcgc
    12241 gttaatacgc tgaaaatctc cgttgctgat ttcctgcaat taaccgctcc ttatggctgg
    12301 acgcttacgc caattccgtg gtgtgaagaa ggtttctgga ttgaacgcga caatgaagat
    12361 gcattgccat tgggtagtac cgccgagcat ttaagcggcc tgttttatat tcaggaagcc
    12421 agttcaatgt tgcccgttgc cgccttgttt gctgacgata atgcaccaca gcgggtgatg
    12481 gatgtcgcag ctgcgccagg ctccaaaacg acgcaaattg ccgcgcggat gaataacgaa
    12541 ggggcaatcc ttgccaatga gttttccgcc agtcgggtaa aagtgttaca tgccaatatc
    12601 agccgctgtg gcatcagtaa tgttgcgctc acacattttg atggccgcgt gtttggtgcg
    12661 gcagtgccag aaatgttcga tgccattttg ctggacgctc cctgctccgg cgaaggcgtg
    12721 gtgcgtaaag atcccgatgc gctaaaaaac tggtcaccag aaagcaatca ggaaatcgca
    12781 gctacccaac gggaactgat cgacagcgcc tttcatgcat tacgccctgg cggtacgctg
    12841 gtttactcga cctgtacctt aaaccaggaa gaaaacgaag ccgtttgcct gtggctgaaa
    12901 gagacttacc ccgacgcagt agagttttta ccgcttggcg atctcttccc tggtgcaaac
    12961 aaggcgctga ccgaggaagg ctttttgcat gttttcccac aaatttacga ctgcgaaggc
    13021 ttcttcgttg ctcgtctgcg taaaactcag gcgattcccg ccttacccgc cccaaaatac
    13081 aaagtgggca atttcccgtt cagcccggtg aaagatcgag aagctggaca aattcgtcag
    13141 gcggctgcag gtgttggctt aaactgggat gaaaacctgc gactctggca gcgcgacaaa
    13201 gaagtgtggt tgtttccggt agacattgaa gccctgatcg gtaaagtccg attttctcgc
    13261 ctggggatta aacttgccga aacgcacaac aaaggttatc gctggcagca tgaagcggtt
    13321 attgcccttg cctcccccga caatgtgaac gcttttgaac tgacaccgca ggaagcggaa
    13381 gagtggtatc gcgggcgcga tgtttacccg caagccgcgc cagtagcgga tgatgtattg
    13441 gttacttttc agcatcagcc gattggttta gccaaacgga ttggttcgcg attgaaaaac
    13501 agctatccgc gtgaactggt gcgcgatggg aaacttttta ccggtaacgc ctgacagcgc
    13561 acaaaaaaag cgcacttttt gactggcaca ttcggctgcc tcaactaggc tgaaaaatgg
    13621 tgcgatcgaa ctggtcgtac cacaaccggc agctaaatgg agagcacgaa gatgaaaacc
    13681 agtgtgcgca taggcgcttt tgaaatcgac gacggcgaat tacacggtga atcgccgggt
    13741 gatcgaacat taaccattcc ttgtaaatca gaccccgatt tatgtatgca actggatgcc
    13801 tgggatgctg aaaccagtat ccctgccctg ctaaatggcg aacactctgt cctttaccgt
    13861 acccgttacg atcaacaatc tgatgcctgg attatgcgtc ttgcctgatc caaaaagaac
    13921 ccgtcggcat ggcgggttat ttgtcctggt tattcccccg ttgtaaaatc tctcctaaac
    13981 ttaacggtac ggcaccacac ttcggggatg aaatgttcgc gctggtactt tttgtttgct
    14041 acctggatgg cggttgtgaa gatattgttg tggatgtcta caacacggaa cagcagtgtc
    14101 ttcattctat gagcgatcaa cggatccgcc agggcggttg ttttccgatt gaggatttta
    14161 tagatggttt ctggcgacct gcacaggagt acggtgattt ttaattattg caattgcaca
    14221 agagtcagtt cgcccccaaa gacagcaccg gtatcaatat aatgcaggtt ggcaatatcc
    14281 acgcgatgtc gcaacggtgt atgaccaaac cagaaatgat cagcacctgt aattccctgc
    14341 cctttttggc gttcacctaa tcgcgagcgg ctccacaaga cctgatgcaa atcaacgtcc
    14401 ttttgccatt cataaacatc atctggataa tcggcatgag caataacatg tttgccggta
    14461 cgactgtgta cttcaagaat aaagggcaaa tgctgacatt tttccagcgc cgttttcgct
    14521 tgtttctgtt gattatctgc cagcgcaata aaccagtcgc cgccattcat caaccacaaa
    14581 gacatctgct gggatgccag cgcatccatc gccatctgtt catgattgcc tcttaccgca
    14641 caaacccaat gttgttccag taactgcaga caacgtaaac tttgcggccc acgatcgata
    14701 acgtctccta ctgagataag taaatctcgc cacggatcaa aacgacaatg ccataatttg
    14761 cggcgcaact gctcaagaca accgtgtata tcgccagaaa gccagatatg tcgccattga
    14821 tgacccgcaa ttctctgata aacgggcgca ggctgtttca tcaatatttt cctcccgcgc
    14881 taaagatcac ataatcttaa caagaatgtt aaaaaacgct ggactcagac agtagagtgt
    14941 gtgttatggt tgactataaa gtcagcgaag gaaatgcttc tggcttttaa cagataaaaa
    15001 gagaccgaac acgattcctg tattcggtcc agggaaatgg ctcttgggag agagccgtgc
    15061 gctaaaagtt ggcattaatg caggcttagt tgccttgccc tttaagaata gatgacgacg
    15121 ccaggttttc cagtttgcgt gcaaaatggt caataaaaag cgtggtggtc atcagctgaa
    15181 atgttaaaaa ccgcccgttc tggtgaaata actgaggcgg tttttttatt ggaaatcaaa
    15241 aggctatttt aggtaattaa cagagttttt cagctcgttc tataaacggt gccagactca
    15301 ttttttcgcc gggattgtta ggatcatcaa tctgaatcac cgaaatgggt tgggctttag
    15361 tcttcccact ggcaacttcc ttttgtgcga tatcgtttaa aggatactgc acgagggtac
    15421 ttgggttaat gacatacaaa gcattacccg gtctgcaagt cagcatcacc tcttcgcgat
    15481 taaacgccca tttgtcttta cccacttcaa aacgactgac ggtaatcacc tgcggtgcag
    15541 ccagcgccgc tgcagaactg gtgagtaaca gaaacgtcag aatacttttt ttcatcattt
    15601 tcgtaatcca tcaaaaaggt tcgagagtcg caagcaggct gatgatcacc agcactaccg
    15661 cacctatcgc ccattcgagt ttagtcatcc actcaaacca gggtgccgca cgatcttcat
    15721 cttgcctcat gcgcggtaca agaacataac gattagccag cgcaatgacc accataatca
    15781 tcaccaggat ggctttgagc aataagagtt ggccccagta agtcgtaagc gtggggggaa
    15841 atccggtaat caacaatgca ttaagcacgc cgcttgccag tacgccgatc accgcaaaat
    15901 gcccgcacca ggaaaaacgc atcagcgcct gaatggcctg gtgtcgccaa cggcctttga
    15961 tgagttgcat acaccagagc accggcagta atcccccaaa ccacgccgcc gcacaaatca
    16021 ggtgaatcgc gtgattagtc tgatggattt tcgccgttac cccttcattc agtgtcgcat
    16081 gcccgattcc cgccagcaga ataaattgcg cggtagtgag cataaacagc aaacgtggca
    16141 tattccgcgg ttgcataagg gcgacgatca acgttacgag ggcgagaaca atttgccata
    16201 accagacgcc accaaactgc gtttgcaaaa cagcctgcca aatgtttggc gaaaatacat
    16261 ctgcccatcc cgttcccatc aacccgccct gaacggcgag cattgcagtg gcactgatca
    16321 aactccagac ggcagcgtgc tgttgtaaac gcagaaaacg cttcgccagc aagcgacgaa
    16381 tcgttaaggg ggccagccag gcaccgtaca ttgcgaagcc aaagaccagc atcagcgagg
    16441 tgaaatggat aaatcgcagc gcgatccagg taaacgccag catgatttat ttcacgctaa
    16501 aggtgtagtg tcctttcgtt ttatgcccgt ccaccgaaac aacatgccag tcaacgatgt
    16561 aggttccggg tttcagcgaa tcggccagtg gaacaatcag ttgcttttgg tcctgctcat
    16621 ttcgcttcgc cggtaatgtt ttaatatttt cgttttttgg ccccgtgatt tttgcaccac
    16681 tgaatcctgt ttcaacacct tccgagaagt ttaaagtgat tgcctgcggt gcagctgtca
    16741 cttgcgcgtt tgccgcagga tactgatgcg ttaaatgcgc atgtgcccag acggaaggtg
    16801 tcaccaacga agtggtcagg attgccagcg cgtagcgaag ggagcgtgca gttgaagtca
    16861 tattatctat tcctttttgt aataactttt ttacagagca taaccttgtc taatgtctga
    16921 gtcgaggatc atcaattccg gcttgccatc ctggctcact cttagtaact tttgcccgcg
    16981 aatgatgagg agattaagaa tgctgaagaa tctggctaaa ctggatcaaa cagaaatgga
    17041 taaagtgaat gtcgatttgg cggcggccgg ggtggcattt aaagaacgct acaatatgcc
    17101 ggtgatcgct gaagcggttg aacgtgaaca gcctgaacat ttgcgcagct ggtttcgcga
    17161 gcggcttatt gcccaccgtt tggcttcggt caatctgtca cgtttacctt acgagcccaa
    17221 acttaaataa aacttataca gagttacact ttcttacata acgcctgcta aattatgagt
    17281 attttctaaa ccgcacccat aatttgcagt cattttgaaa aggaagtcat tatgtcgttc
    17341 tggaaagttg cagcagcgca atatgagcct cgtaaaacct cactcaccga acaggtagct
    17401 catcatctgg agtttgtgag ggccgccgcc aggcaacaat gtcagctgtt agtttttcca
    17461 tcgctttctt tactggggtg tgattattcg cgacgtgccc ttcctgcccc acccgatctc
    17521 tcactgttag acccgctttg ttatgccgca acgacctggc gaatgaccat cattgccggc
    17581 cttcccgttg aatataacga tcgctttatt cgtggaattg cggtgttcgc accgtggcga
    17641 aaaacgcctg ggatctacca tcagagtcat ggtgcatgtc tgggccgtcg ttccagaacc
    17701 atcacggtgg tcgatgaaca accgcaaggt atggatatgg acccgacctg ttcactgttt
    17761 actacagggc aatgtctggg agaacccgac ctgctggcgt cggcccgtcg cttacaattt
    17821 ttttcacatc agtactcgat tgccgtgctg atggcaaatg cccgtggtaa cagtgcacta
    17881 tgggatgaat atggtcgtct catcgttcgc gccgatcgtg gttcattatt gttagtcggt
    17941 cagcgttcat cacagagttg gcaaggcgat atcattccat tacgctaggc tttttcggcc
    18001 tggagcatgc catgttgcgc attatcgata cagaaacctg cggtttgcag ggagggatcg
    18061 ttgagattgc ctctgttgat gtcattgacg gaaaaatcgt caaccccatg agccacctgg
    18121 tgcgccccga tcgtcctatt agtccacaag cgatggcgat tcatcgcatc accgaagcca
    18181 tggtcgccga taaaccgtgg attgaagatg tgatcccaca ctattacggt agtgaatggt
    18241 atgtcgcgca taacgccagc tttgaccgcc gcgtactgcc tgagatgccc ggtgagtgga
    18301 tttgcactat gaaactggcc cgtcgtttgt ggcctgggat caagtacagc aatatggcgt
    18361 tatataaaac acgcaagctc aatgtacaga cgccgccggg cctgcatcat caccgcgcgt
    18421 tgtatgactg ttatatcacc gccgcgttgc ttatcgatat tatgaacacc tccggctgga
    18481 cggcagaaca gatggccgat atcaccggac gtccgtcgtt gatgacgacc ttcacctttg
    18541 gcaaataccg tggcaaagcg gtttccgacg ttgccgaacg cgatccgggc tatctgcgct
    18601 ggttatttaa taacctggac agcatgagcc cggagctgcg tttaacactg aaacattatc
    18661 tggaaaatac ttagtccgca ggcgtagcgg gtaatgttcc ctgcgccagc gcgaccagaa
    18721 aagcatattc catcgctacg ccttcgtacg atttaaagcg accagattta ccgccatggc
    18781 ctgagtccat gtcggtacag agcaataaaa gatggtcatc ggttttcagc tcgcgcaatt
    18841 tagcgaccca ttttgccggt tcccaatatt gcacctgaga atcgtgcaaa ccggtcgtta
    18901 ccagtaaatg cggataagcc tgtgcggtga cgttgtcata cgggctgtag cttttcatgt
    18961 actcgtaata ttgcggatcc tgcgggttac cccactcttc aaactcacca gtggtaagag
    19021 gaattgattc atcaagcatc gttgttacaa catcaacaaa cggtacctgg gcgataacgc
    19081 cgtggaataa ttccgggcgt tgattaattg caacgcccat caacatgccc cccgcactcc
    19141 cgcccatcgc ataacaaagc gaaggagagc catagcccag ttttaacaat gcatcgcagg
    19201 catcaagata atcattaaac gtatttttct tcttcagaaa ttttccgtct tcgtaccatt
    19261 gttgccccag ctcaccaccg ccgcgaacat ggacaatggc gtagacaaag ccacgatcta
    19321 acaaactcaa gcggctaaaa ctgaaatcgg catcaatact tgcgccgtaa gaaccatagc
    19381 catacaccag caacgggttg tgtcctttgc gaaaatgttt gcgatggtag accaacgaaa
    19441 ccggaacttc gacgccatca cgggcgacta tccacaggtg ttcactgcgg taattcgccg
    19501 catcaaaacc gggcacttct gtttgtttta atacacgacg ctcaccggta tccatatcca
    19561 gttcaaacaa agtgtctggt gtggtcatgg aagaataacc ataacgcaat cgcgcggttt
    19621 caggttctgg attgtaggca atccaggtca cataggctgg atcatcaaag gcaataccaa
    19681 tgacttcccg ggtcttgcgg ttaatttggc gcaaactggt taacccgcgc tgacgctctt
    19741 caaccaccag ccagtcggta aacagcgtaa acccttccag catgatgttt tcgcgtggcg
    19801 gaattaactc ttcccactgt tgctcatcac gcatacgggt acggtataag ccaaagtttt
    19861 tgccgtggcg gttggaacgc agataaaaac gatgctggta gtgatcaagg ctgtattcgt
    19921 gatctttgcg gcgcggcaga aaaacaaacg gctcggcatc ggccatttcc gcgtccagca
    19981 ggcgaacttc actggtggtg gcgctggcca aatgaatgac tacatagtgc ttcgaggtcg
    20041 ttttatgcag gctgacgtaa taggtatcgt ctttttcttc gtagatcagt ttatcttgcg
    20101 atgctggcgt accgatggcg tgacgccaga cctgataagg cagcagcgtc accggatgct
    20161 tgcgaacata gtagaaagtc caggagtcat ttgcccagac aaagctgggt tcaacgttat
    20221 ccagcagttc cgggtaccag ttaccagtat ccagattacg aaaacgaatg ccgtactggc
    20281 gtcgggaaag aaaatcttct gccagcgcca taatggtgtt atcgggcgta atcgccattc
    20341 cgcccatcga ataaaactca ctatgagctg cgcgcttatt ggcatcgagc aatgtttccc
    20401 actcatccca ctcttcactg aatgccgatt gacgctggta gatagcatat tcacagcctg
    20461 gttcataaat atgccgatag cggtagccat ttttgatgta gggcgcagaa acttctcgtt
    20521 gcggaatgcg gtcgatgatt tcctttaaga tgcgatcctg caaggcttgt tgtgaggcca
    20581 tcacccgatg accgtaacta ttttcttgtt gcaggtagtc caggacttct ggctgagaac
    20641 gcgtatcgtc ccgcagccag tagtaattat cgatgcgcgt atcgccatga agcgtcatgg
    20701 cgtggggaat gcgggcggct tttggtagca tgttattgtt ctttctggtt gaaacatctt
    20761 ataagggtgg caaaactcac cggggatgca agcgaaacag gggagtcatt gcttagatga
    20821 tgacaggtaa tggcgcggat atcgaatgtt atgcagacag agaaaatcag cctgttcaaa
    20881 tggctgtgcg attctggata gcccgaaata gtcaacttca ggctatccag agagcggaat
    20941 tattccgcca aagtgcgttt ttgctgttcg agatcgcgtt caatgccgtc acgaacatcc
    21001 tgggggattt tcagcgcgtc acccagtgca ttcaggtaac tgcgttccat aaaatggtca
    21061 atatcaatag ccgcgcaact caggaaatag atttccagcg cctcttcttc attgcggacc
    21121 ccggtagcca ggcgttgtgg atccagcggt tgttcgattg cctgctcaat gagtacacgc
    21181 ccctgctctt ccacgccggc ttcacgcaat tgctggtcga ttgccacacg ttctttggca
    21241 tcaatatgac catcactttt agcggcaaag accagcgcaa ggatcaaacg ttctgtacgc
    21301 tcatccagcg gcgtactttg cgcgccaaac tgcggttcgt cctgatgcgc cgcgcgaatt
    21361 ttatctttgt atttattcca cagcaccgta cccgctaccg ctccgccgcc aaccagtaac
    21421 gcgttggtgc catatttcgt aagaagttta cgtgctgatt tatttgcgac cagcagccca
    21481 gccagtccgc ctaatgcgcc tggcactaac agtttgccca atccctgatc cgcagacgag
    21541 gaggtagaag aactgctttg cccaagcagg gattgcagtt gatttaacca gttagccata
    21601 tttgctcctc aataaccatt tttagtgcct gtagcatagc ggatgaggat gtcagaaaat
    21661 gtatatcgag acaaaagatg cgcaaataag cggggcggta ggccgttatt caaagaaatt
    21721 cgcgccaggt aaggtattta ctgtatatca ggtgataagg gtattttagg tgaaagtagt
    21781 ttgtcgtttt gagtggcatt gtttgatgct gattgcccga tgcgacgctg ttgcgtcttc
    21841 tcaggcctac gattgtggtg cgttctgggg cggacaaggc actcgcgccg catccgccaa
    21901 cggtcaatcg aattaacaga agccattaac gccgctgata ttccgccatt cccgctttgc
    21961 agtccacgct gacctggtaa tgaatatcgg cacttttacc acgcacggtt agcggtactg
    22021 accatttatc atctttaccc tgaatgtcct gcaaactgac ccaagccacg ggatcggcct
    22081 gaccgacaat tttttgatca tctgcccagc gcgccacgcg attttgttga taatcacgtt
    22141 ttacgctcgc ggcaattccg gcagcatcca gaccttcaca ctttgggaaa gtgaccgact
    22201 tgctggtttc attattggca gcgaaaactg atgcgcaggc agaaaccaac aacagcccta
    22261 aaaacgcccc tctttttttc atgtttttct ccatagcaca atgattcagg agaaagcatg
    22321 gtacaaattg tcaggagcgc aagttgcttc aggccgcgtg tgaggcatct tcctcttcgg
    22381 attcagcacc gacgacctgt ggggacggta atttgccggt tttcagaatg gtgctcagca
    22441 catctttttg ttctgccagc catagcgaaa gggcttcacg ttgctcgtct tccatttgca
    22501 ctggagaatt tgtcagccag gtgtcaagca gatccgccgt atcaagcatt ttatcataag
    22561 catcggcttc ctttttgctg gtaaacgaca ttttctcttc gccctcacga atgactacgt
    22621 atttaacttc aaccgccatt tgcagcctct cataataact gtgtttttat acagtatatt
    22681 tcttttcggt tgagaaatca acatcagcaa taaagacaca cgcaaacgtt ttcgtttata
    22741 ctgcgcgcgg aattaatcag gggatattcg ttatgacgtt attaggcact gcgctgcgtc
    22801 cggcagcaac tcgcgtgatg ttattaggct ccggtgaact gggtaaagaa gtggcaatcg
    22861 agtgtcagcg tctcggcgta gaggtgattg ccgtcgatcg ctatgccgac gcaccagcca
    22921 tgcatgtcgc gcatcgctcc catgtcatta atatgcttga tggtgatgca ttacgccgtg
    22981 tggttgaact ggaaaaacca cattatatcg tgccggagat cgaagctatt gccaccgata
    23041 tgctgatcca acttgaagag gaaggactga atgttgtccc ctgcgctcgc gcaacgaaat
    23101 taacgatgaa tcgcgagggt atccgtcgcc tggcggcaga agagctgcag ctgcccactt
    23161 ccacttatcg ttttgccgat agcgaaagcc ttttccgcga ggcggttgcc gccattggct
    23221 atccctgcat tgtaaaaccg gtgatgagct cttccggcaa ggggcagacg tttattcgtt
    23281 ctgcagagca acttgctcag gcatgggaat acgctcagca aggcggtcgc gccggagcgg
    23341 gccgcgtaat tgttgaaggc gtcgttaagt ttgacttcga aattaccctg ctaaccgtca
    23401 gcgcggtgga tggcgtccat ttctgtgcac cagtaggtca tcgccaggaa gatggcgact
    23461 accgtgaatc ctggcaacca cagcaaatga gcccgcttgc ccttgaacgt gcgcaggaga
    23521 ttgcccgtaa agtggtgctg gcactgggcg gttatggtct gtttggtgtc gagctgtttg
    23581 tctgtggtga tgaggtgatt ttcagtgagg tctcccctcg tccacatgat accgggatgg
    23641 tgacgttaat ttctcaagat ctctcagagt ttgccctgca tgtacgtgcc ttcctcggac
    23701 ttcctgttgg cgggatccgt cagtatggtc ctgcagcttc tgccgttatt ctgccacaac
    23761 tgaccagtca gaatgtcacg tttgataatg tgcagaatgc cgtaggcgca gatttgcaga
    23821 ttcgtttatt tggtaagccg gaaattgatg gcagccgtcg tctgggtgtt gcgctggcga
    23881 ccgctgagag tgttgttgac gccattgaac gcgcgaagca cgccgccgga caggtaaaag
    23941 tacagggtta aacccggcaa aaaaacgcta caaaaatgcc cgatcgtaga tcgggcgttt
    24001 tgacttttac agcttagcgc cttctacagc ttcacgcgcc agcttagtaa tgcggtcgta
    24061 atcgcccgct tccagcgcat ctgccggaac cagccaggaa ccaccgatgc acagcacgct
    24121 tttcagcgcc aggtagtcac ggtagttagc cggagaaata ccacccgtcg ggcagaaacg
    24181 gacctgggag aacggacccg cgatcgcctg cagggctttc acgccgccgt tagcttcagc
    24241 cgggaagaat ttgaactctt tcaaaccgta gtccataccc agcatcagtt cggaaacagt
    24301 gctgatcccc ggaattagag gaatagtccc ttcggtagca gctttcagca gcggctcggt
    24361 cagacccggg ctaattgcga actgtgcacc cgcttcagtg acttctgcca gctgctgtgg
    24421 attcagcacc gtaccggcac ccacaatcgc ttcaggcact tctttggcga tagcacggat
    24481 agcgtcaact gcacactcgg tacgcagagt cacctccaga acgcgcaccc caccagcaac
    24541 caacgctttt gccatcggca ctgcgtgttc cagttttttt accacgataa ccggtacaac
    24601 cgggccggtg gtcaggattg attctgcact tgttttccag tttttcatca gagttttctc
    24661 tcgcctgatt acaaatttgt cgtcttaaaa agtgatacag gttgcgccct gttcggcacc
    24721 ggacagtttt tcacgcaagg cgctgaataa ttcacgtcct gtccccacgc gtgacgcgct
    24781 caggtcagga atgtgcggtt cgcgagcagc cagttccgct tcgtctacca gcagcgtcag
    24841 ttcgcctgtc tgtccattca cacgaatgat gtccccgtcg cgcacttttg ccagcagccc
    24901 gccatcgtag gcttctggtg ttacgtggat agctgacggc actttacctg aagcgccgga
    24961 gagtcgtcca tcggtaacta acgcaatttt gaaacaccgg tccaataata caccaagtgg
    25021 cggcatgagt ttatgtaatt ctggcattcc gttcgctttt ggcccctgat gacggacaac
    25081 aacgacacaa tcgcggtcca gcaaacccgc ttcaaaggcc ggcataacgt catgctggct
    25141 ttcaaaaaca accgctggcg cttcaatcac ctggttctca accggcacgg cagaggtttt
    25201 cataaccgca cggcccaggt taccgcttaa cacttttgtc ccaccatgat gagagaaagg
    25261 ttgttcgaag gaagcgatca cattgctgtc gagtgatttt tccgcccctt cccgccagtc
    25321 cagttcacca ttattcagcc atggttcaag ggtataacga gacagaccaa agcctgccac
    25381 cgtattgaca tcttcatgca gcaggcctgc tttgagcagt tcacgcacca gaaccggtac
    25441 gccacctgcc gcctggaagt ggttaatatc ggccggaccg ttcgggtaga gacgtgccat
    25501 cagcggtaca acatcagaaa ggtcagagaa gtcatcccag ttaatctgaa taccggccgc
    25561 gcgcgccatc gccaccaggt gcatggtgtg gttagtggaa ccaccggtcg ccagcagtgc
    25621 aacgataccg ttcaccacca ctttctcatc gatcatctta ccgatcggca tccattcatt
    25681 accattaccg gtcatgcgtg taacctgacg cgcagcggca gcggtcaaag catcgcgcag
    25741 cggagaatcc ggatgaacaa aagaagagcc tggcaactgc atccccataa actccaccac
    25801 catctggttg gtgttggcag taccgtagaa agtacatgtt cccggcgcgt gataagacgc
    25861 ggcttctgac tccagtagtg ccatgcggtc cactttacct tcggcataaa gctggcgaat
    25921 acgcactttt tctttatttg gcaaaccgct tgccatcggt ccagacggca caaacaccgc
    25981 aggcaaatga ccaaacgaca gggctgccat cgtcagaccc gggacaatct tgtcgcacac
    26041 accgaggaac agagcaccat caaacatgtt atgggacagc ccgaccgccg cagacatcgc
    26101 tatcacttcg cggcttagca gcgacaattc cattccatcc tgcccctggg tgacaccatc
    26161 acacatcgcc ggaacaccgc ccgcaacctg accaaccgca ttcgcttcat gcagggcttt
    26221 acgaatgatt tctggatagt gttcataagg ctggtgcgcg gagagcatgt cgttatagga
    26281 ggtgatgatg gcgatattgt tacgcaacat gcttttcaaa gaggctttgt cttctggctg
    26341 gcaggcagcg aaaccgtgtg ccaggttacc gcatgccaac tgcgaacgat gaacagtcga
    26401 cgttttcgct tgttctatcc gggcgagata agcagagcga gtctcgcgcg aacgttcaat
    26461 gattcgattt gttacgcgta acaattgtgg attcataaag gctcctgaaa ttgagttgtc
    26521 agagcaggat gattcacaac gcgtttcatt cagaggattt atgactgaaa cgcctgtaac
    26581 cggagctcat agggcaaaaa cgtttcagtc agtgtaataa aaaaagcctc gtgggtgaat
    26641 ccgcacgagg cctgaaagtg taaaaattgt tctacaatct gtgcaagatc atgttaccgg
    26701 taaaataacc ataaaggata agcgcagata ttactcaaac tcattccagg aacgaccatc
    26761 acgggtaatc atcgccaccg aggcaacggg tccccaggtt ccggcctgat acggtttcgg
    26821 cgcatcattg tccatcgccc acgcctcagt aatggagtct acccatttcc aggcttcttc
    26881 cacttcatca cgacgtacaa acagtgcctg aataccacgc atggtttcca gcagcagacg
    26941 ttcataggca tccgccagat gcgtctgatt aaaggtttct gaatagctca gatccagctt
    27001 ggtgatttgc aggttatgtt tgtggtcaag gccaggaact ttattcagta cctggatatc
    27061 cacgccttca tcaggttgca gacggatagt cagtttattc tgcggcagat cctgccacga
    27121 ctctttaaac agattcagtt caggtgtttt gaaatagacc acgacttcag aacatttggt
    27181 cggcagacgt ttaccagtac gcaggtagaa tggcacaccg gcccagcgcc agttatcaat
    27241 gtcgacgcgg atcgccacga aggtttctgt attgctgctc ttgttcgcgc cctcttcttc
    27301 cagatatccc ggcacttttt tgccctgggc gaagcccgca gtatattgcc cgcgtacggt
    27361 tttttcgcgt acgttggagc ggtcgatgcg gcgcagggac ttcagtactt tcactttttc
    27421 atcgcggatg ctgtctgcgc tcaggtcaga tggcggagac atcgcaatca tgcagagaat
    27481 ttgtagcagg tggttctgaa tcatgtcacg catctgaccg gctttatcaa aatagcccca
    27541 gcgcccttcg atccccactt cttctgccac ggtaatctca acatgatcaa tggtgcgatt
    27601 gtcccagtta ttcacaaaca gggagttagc aaaacgcagc gccaacaggt tcagcaccgt
    27661 ttctttacca agatagtggt cgatacggta aacctggcac tcctcgaagt attcgccaac
    27721 ctgatcattg atttcctgcg aggtcgccag cgacgtcccc agcggtttct ccatgactac
    27781 gcgtgccggt ttagcattca gttttgcctc gccaagccct ttgcaaattg cgccaaaagt
    27841 gctgggcggc atggcaaagt agttaatggt gatacgattt ttttgatcca gcatcgcgcc
    27901 gagacggttg aatgcagcag tgtcattgac atcgagatta caaaaatcca gacgtgcact
    27961 cagggtgtcc cataaacctt catcaatggt ttctttcatg aaagtttcga gcgcctcgcg
    28021 gacaactttg gtatatgccg ctttatccca gtcagcacgc cctacgccga taatccgggt
    28081 gtccgggttg agctgaccgg ctttttccag ttgatacagg gaaggcagca atttacgacg
    28141 cgcaaggtcg cctttcgcgc cgaaaatgac caggtcacag gcctgggctg tttgcgttac
    28201 cgccatgtca ttctccttaa gttaactaac ccggtactta agccagggta tacttgtaat
    28261 tttcttacgg tgcactgtac tgcttttacg agcttgcgaa aactgtaaac gcttatccac
    28321 ccgtgcgatt acgggaaaag cgcgcaaagt gcggcaaaac tgataaaaaa atcatcgttt
    28381 tccattcggt aaaaatctga cactgatcat gttatgaaaa aaaataacaa cttttttatc
    28441 tgcttttgtc attaacacgg cacacaggcg taatatctga caaaactgca tttcgatttc
    28501 tttcagtgcg gaaatcgtca ttacccgtga gtctctttac atcatgaata tgctggaaaa
    28561 aatccagtct cagctggaac atttgagcaa atcagagcgc aaagttgccg aggtcattct
    28621 ggcttcgccc gataacgcga tccattcgag tattgctgct ctggcgctgg aagccaatgt
    28681 tagcgaaccg acggtgaatc gtttctgtcg cagcatggac acgcgcggtt ttcctgattt
    28741 taaacttcat ctggcacaaa gtctggcgaa tggcactccc tatgtaaatc gcaatgtcaa
    28801 tgaagatgac agcgttgaat catacacagg gaaaatattt gagtccgcaa tggcaacgct
    28861 tgatcatgtc cgtcattcac tggataaatc tgccatcaac cgcgccgtcg acttgctcac
    28921 tcaggcaaaa aaaatcgcct ttttcggatt aggctcttca gccgccgttg cccacgatgc
    28981 gatgaataag ttctttcgtt ttaatgttcc ggtggtgtac tccgatgata tcgtgctgca
    29041 acgcatgagt tgtatgaatt gtagcgacgg agacgtggtg gtgctgattt ctcacactgg
    29101 aagaacaaaa aatctggtcg agctggcgca gctggctcgc gaaaacgacg caatggtgat
    29161 tgccctcacc tctgcgggta ccccgctcgc ccgggaagca acgctggcaa ttaccctcga
    29221 cgtaccggaa gatactgaca tttatatgcc catggtttct cgacttgcac agctgaccgt
    29281 gatagatgtg ctggcgacag gatttacttt gcgacgcggt gcaaaattca gagataactt
    29341 gaagcgggtc aaggaagcgc tgaaggaatc gcgttttgat aagcagttac ttaatttaag
    29401 tgacgatcgc taaaaacgac tgtcactgtc ctaatcttat acgacatccg aatgagatta
    29461 atttatcgcc atcgcggcgt tatttcattc ggatttcatg ttcaagcaac acctggttgt
    29521 ttcagtcaac ggagtattac atgtccagaa ggcttcgcag aacaaaaatc gttaccacgt
    29581 taggcccagc aacagatcgc gataataatc ttgaaaaagt tatcgcggcg ggtgccaacg
    29641 ttgtacgtat gaacttttct cacggctcgc ctgaagatca caaaatgcgc gcggataaag
    29701 ttcgtgagat tgccgcaaga ctggggcgtc atgtggctat tctgggtgac ctccaggggc
    29761 ccaaaatccg tgtatccacc tttaaagaag gcaaagtttt cctcaatatt ggggataaat
    29821 tcctgctcga cgccaacctg ggtaaaggtg aaggcgacaa agaaaaagtc ggtatcgact
    29881 acaaaggcct gcctgctgac gtcgtgcctg gtgacatcct gctgctggac gatggtcgcg
    29941 tccagttaaa agtactggaa gttcagggca tgaaagtgtt caccgaagtc accgtcggtg
    30001 gtcccctctc caacaataaa ggtatcaaca aacttggcgg cggtttgtcg gctgaagcgc
    30061 tgaccgaaaa agacaaagca gacattaaga ctgcggcgtt gattggcgta gattacctgg
    30121 ctgtctcctt cccacgctgt ggcgaagatc tgaactatgc ccgtcgcctg gcacgcgatg
    30181 caggatgtga tgcgaaaatt gttgccaagg ttgaacgtgc ggaagccgtt tgcagccagg
    30241 atgcaatgga tgacatcatc ctcgcctctg acgtggtaat ggttgcacgt ggcgacctcg
    30301 gtgtggaaat tggcgacccg gaactggtcg gcattcagaa agcgttgatc cgtcgtgcgc
    30361 gtcagctaaa ccgagcggta atcacggcga cccagatgat ggagtcaatg attactaacc
    30421 cgatgccgac gcgtgcagaa gtcatggacg tagcaaacgc cgttctggat ggtactgacg
    30481 ctgtgatgct gtctgcagaa actgccgcag ggcagtatcc gtcagaaact gttgcagcca
    30541 tggcgcgcgt ttgcctgggt gcggaaaaaa tcccgagcat caacgtttct aaacaccgtc
    30601 tggacgttca gttcgacaat gtggaagaag ctattgccat gtcagcaatg tacgcagcta
    30661 accacctgaa aggcgttacg gcgatcatta ccatgaccga atcgggtcgt accgcgctga
    30721 tgacctcccg tatcagctct ggtctaccaa ttttcgccat gtcgcgccat gaacgtacgc
    30781 tgaacctgac tgctctctat cgtggcgtta cgccggtgca ctttgatagc gctaatgacg
    30841 gcgtagcagc tgccagcgaa gcggttaatc tgctgcgcga taaaggttac ttgatgtctg
    30901 gtgacctggt gattgtcacc cagggcgacg tgatgagtac cgtgggttct actaatacca
    30961 cgcgtatttt aacggtagag taatctcacc tgccccggcc gctgatgacc ggggtattta
    31021 gcaacacata aattaggact actcattcaa tccaatcata atcacagccc gctgtaaaat
    31081 gaatacaggg atagcctgaa tggagatcta aatagcttgc aagacgtcgc atacccgctt
    31141 cctctgcaac actatatcca ataactgcca tcggtaagcc actatctttg gagtattgtg
    31201 tctgcaccca tgttttaatt gaatcgttaa tcgtaatata ataatcagcc tgatattcca
    31261 tatattgtat tggatcacaa aaacagcctg ccccaatccc aatagttcta actattctgg
    31321 ctctatctcc ataaaattgg atcccaggaa gattataaat tttcaaattt ttggcaaaac
    31381 gtttggtaat attaatggca ctgtcaggtt ctatagcata tacatggtac atatcatcag
    31441 aagcaacaat atttgtaaca tccagttcta actgctgagc caaagcctta gacattccga
    31501 acgtaggctc tcgatccatg acatcatggc aacgaatgat taccaaatta tttttatgca
    31561 aa
//
LOCUS       DAPGWB010000040        31119 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.040, whole genome shotgun sequence.
ACCESSION   DAPGWB010000040 DAPGWB010000000
VERSION     DAPGWB010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 31119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31119
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.040"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            73..396
                     /locus_tag="RHX79_001770"
     CDS             73..396
                     /locus_tag="RHX79_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecR-like lipofamily protein"
                     /protein_id="HDV2196956.1"
                     /translation="MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQ
                     HAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSA
                     FPVFL"
     gene            567..1064
                     /gene="ftnA"
                     /locus_tag="RHX79_001771"
     CDS             567..1064
                     /gene="ftnA"
                     /locus_tag="RHX79_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HDV2196957.1"
                     /translation="MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLR
                     RHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKIN
                     ELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELST
                     LDTQN"
     gene            complement(1102..1341)
                     /locus_tag="RHX79_001772"
     CDS             complement(1102..1341)
                     /locus_tag="RHX79_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecH family protein"
                     /protein_id="HDV2196958.1"
                     /translation="MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSA
                     EGMTAGELVAFLAAKGKFIPSKDGFSTDQSKICRH"
     gene            1532..2743
                     /gene="tyrP"
                     /locus_tag="RHX79_001773"
     CDS             1532..2743
                     /gene="tyrP"
                     /locus_tag="RHX79_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter TyrP"
                     /protein_id="HDV2196959.1"
                     /translation="MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLW
                     ALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGA
                     GELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM
                     LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVF
                     IIGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVH
                     LFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFV
                     MALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQF
                     LIAAELLPEVG"
     gene            complement(2805..3470)
                     /gene="yecA"
                     /locus_tag="RHX79_001774"
     CDS             complement(2805..3470)
                     /gene="yecA"
                     /locus_tag="RHX79_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YecA"
                     /protein_id="HDV2196960.1"
                     /translation="MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSP
                     QEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFG
                     LREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMS
                     PEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQC
                     CLH"
     gene            complement(3827..4828)
                     /locus_tag="RHX79_001775"
     CDS             complement(3827..4828)
                     /locus_tag="RHX79_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDV2196961.1"
                     /translation="MSVRKIPSGKWLCECYPYGASGKRIRKQFATKSEALSYERRLMN
                     SRVGDEFQDGSGPRLSELIARWFEMYGKTLSSGAERKVKLEAICSRLGDPFASQFDKN
                     MFATYRERRLSGEWNPKGKKKLSEATVNREQSYLHAVFAELKRLGEWSGENPLTGIRK
                     FREEEKELAFLYVDEIERLLIACDESRNKDLGVVVRIGLATGARWSEAEGLKQSQVLP
                     GRITFVKTKGKKNRTVPISPQLQAMLPKKRGALFSPCYEAFDAAIKRAKIELPDGQLT
                     HVLRHTFASHFMMRGGNILVLQKILGHSDIKMTMRYAHFAPGHLEAAVELNPFDNRG"
     gene            complement(4834..5181)
                     /locus_tag="RHX79_001776"
     CDS             complement(4834..5181)
                     /locus_tag="RHX79_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2511 domain-containing protein"
                     /protein_id="HDV2196962.1"
                     /translation="MKVKKVQLLVTFLSMFSFSAVAMPFKTIERESFNGVWPFNSDEV
                     QLQCLDGNPYVMNFDDNKLYALTGLARIKGKTFGALPLDNNNPFWLDNDAAPGLKKSL
                     GDVTKAAFDLCDK"
     gene            complement(5211..5861)
                     /locus_tag="RHX79_001777"
     CDS             complement(5211..5861)
                     /locus_tag="RHX79_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196963.1"
                     /translation="MAVNSNGSNNRVAGRDFHEKNIQIERYDGSHTVNIAIPSNNDDD
                     DRPLLKAQRKELNSLVAAIAEASNTEAFIIWQKVHAEIGVAGIDDMTVNQYKTAESFL
                     HAMLERCKDHDACKALVSLLLRNSEDCGLRQKLLRYCHINFGTGRLNDLTRSQLQSAL
                     SWLEQQSASSHTESSTLPEVRLRASELIRLYPKEIIFFICVGVLVGGVISRAFFNL"
     gene            complement(5877..6281)
                     /locus_tag="RHX79_001778"
     CDS             complement(5877..6281)
                     /locus_tag="RHX79_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV2196964.1"
                     /translation="MKNDIGQRLREERERLGLSQVAMSDIGGVKKLTQLRYEKGDSFP
                     DAAYLAALSRFGLDVQYVVLGIHSPETYNDDEQELITRFRAASLDVKNAVIGALKGAI
                     SEKETQPSGRELNISGGNNRIAGRDYNETKGR"
     gene            complement(6371..6508)
                     /locus_tag="RHX79_001779"
     CDS             complement(6371..6508)
                     /locus_tag="RHX79_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_305354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196965.1"
                     /translation="MRAMLEDERCSLAAISSMTARSSRDSRSASLGPVAVLRGMRDLV
                     S"
     gene            6580..6783
                     /locus_tag="RHX79_001780"
     CDS             6580..6783
                     /locus_tag="RHX79_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDV2196966.1"
                     /translation="MSGITININVNAPYVSLQKYAEITGIPLNTCKKMLADGRIIIRP
                     KRAKMEKPEVNLVAMLKDALANS"
     gene            6805..7155
                     /locus_tag="RHX79_001781"
     CDS             6805..7155
                     /locus_tag="RHX79_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4761 family protein"
                     /protein_id="HDV2196967.1"
                     /translation="MKKNANNPYSKFRNGVERHVHHVATSASRSNSRYNLNETHATPD
                     GHAVKQIGEHAWLIEKAGIVVHKCPRNPFTGNRIFALNYGDNHFGQDFTLYEALRTVD
                     RLLRGQSFIKQADL"
     gene            7166..7444
                     /locus_tag="RHX79_001782"
     CDS             7166..7444
                     /locus_tag="RHX79_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196968.1"
                     /translation="MTKEHAQGVFIRFIDFRGELLLRASAIDGVVPSEKNAATYVYLN
                     GTRLTVELPYQTVHEIISEAEKARQVNGDKPYIEIICMDSEAEIQKAD"
     gene            7456..7698
                     /locus_tag="RHX79_001783"
     CDS             7456..7698
                     /locus_tag="RHX79_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4754 family protein"
                     /protein_id="HDV2196969.1"
                     /translation="MDKEYKTLINKALERFYFRLSASGVHAERAARDSLTRAIRSLYD
                     VAFYADDLDALNELSELICAAECGEHIEPYKLGNIA"
     gene            7695..7808
                     /locus_tag="RHX79_001784"
     CDS             7695..7808
                     /locus_tag="RHX79_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196970.1"
                     /translation="MSIFISWLVLIISVACAIGIMRIINSVKKIERFFSDE"
     gene            7902..8312
                     /locus_tag="RHX79_001785"
     CDS             7902..8312
                     /locus_tag="RHX79_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001376666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196971.1"
                     /translation="MHAKEEGIIRALKEISKMESEVAKKAVANAHMDVATHTMIVAKV
                     TAEAAKIIEEQGVELALLKTKPVTGLDLSDTGRLIYTIGSEPQRYTIIAGLQNKYLIT
                     PHPIRESALLTNLRLIERSQVAFIDDARHTVFNA"
     gene            8336..8539
                     /locus_tag="RHX79_001786"
     CDS             8336..8539
                     /locus_tag="RHX79_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196972.1"
                     /translation="MAIKHFPVVRFTSRGREYEVDERLITTIDKHRSETDAHHIYLTD
                     GTYFCATNVARVNLIRQVQEPRR"
     gene            8536..8802
                     /locus_tag="RHX79_001787"
     CDS             8536..8802
                     /locus_tag="RHX79_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000153698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDV2196973.1"
                     /translation="MTILDYIATHPGCSGGEIAAALNTPTTAINAELRQLWRGGLVIR
                     TNRSTGGRARKTGGQASYHVNPMPFGCSNPLTHMFNQLLKEART"
     gene            8799..9098
                     /locus_tag="RHX79_001788"
     CDS             8799..9098
                     /locus_tag="RHX79_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196974.1"
                     /translation="MSTINHQKLRELAFALQRMATPQKLLAFRAMLSPSAVLALLDEL
                     EHARTTAPAIRLTLHHEIADFCATLEAPGEPETPEAIQQELLQRIDKVFDFFLNQ"
     gene            9110..9727
                     /locus_tag="RHX79_001789"
     CDS             9110..9727
                     /locus_tag="RHX79_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001372767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HDV2196975.1"
                     /translation="MHTQKNRLPCRNQSGYISAAPHKTGAGILNPIQSKAHNRASGFF
                     VRTVLPRLFRVRIMAGRTGPTSVGPDSLLSGVENPVRLATPRFSTLDGELFLSPSKEA
                     TPWQTANNSAHTLRVVTSRLKSTVDFSAHHASRKSCTSICCMSAATRYRTSIPPLFSA
                     IWRMICASCNNSSSSKTNSINSCSGPFLHLAAGGLRTSVVKRIAA"
     gene            9724..10113
                     /locus_tag="RHX79_001790"
     CDS             9724..10113
                     /locus_tag="RHX79_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001534315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDV2196976.1"
                     /translation="MIDAHDFTRWVRTQDTRLAPVLQGLFDLYIRGRDNRARTTKPEN
                     ADTLYFTVDDCYRVDFTPHGLALHCLTPHGESLLAYYDSPASVFAAMLAHRTAGGCAS
                     LSEYTAEFNRLSALFSQEWQRVTGYQP"
     gene            10110..12950
                     /locus_tag="RHX79_001791"
     CDS             10110..12950
                     /locus_tag="RHX79_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001685010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HDV2196977.1"
                     /translation="MSEFAWSWNEPRPAIDPARFTEHRQETETDLQRAIRYYLEADKK
                     AREEQEAKEEAFFAQSAMGKKLMASLEEAGQREKLAQSIISKRRATEQDPVARAFATL
                     KALPVYLREPLSRHLSFLRKKQEADRQKGKKSWQAERYARGTLRKIFERLDRTDSRWL
                     TPGYRSLAGRERLDDLLYLPQLNKHQIQTLATMTAAMFSSTFEKLCDGFGATDGELTM
                     DVTLKAYQMLARMALHLHAMPPHYDALTTDKDRRNEPDTELLPGAILRLTCAEWWKRK
                     LWLLRCEWREEQLRAACLVSRKTSPYLSQDALSEFRAQREKTRDFLKSFMLENEDGFT
                     IDLETVYYAGVSNPVHRKAEMMATMKGLELLAEARGDKAVFLTVTCPSKYHATTENGH
                     PNPKWNGATMRDSSDYLVNTFFAAVRKKLNRDGLRWYGIRTVEPHHDGTVHWHMMVFA
                     HPEEIDTIVSHTRDIAIQEDRHELGDDITPRFKAEYVDGSKGTPTSYIATYIGKNLDS
                     RAVDGIDPKTGKPRVDHETGKSMAESVERAIGWARLHRVRQFQFFGIPSRQVWRELRR
                     LASQMARNPEGPQRLKDDAMDAVLAAADAGCFATYIEKQGGVLVPRKDYLIRTAYDLA
                     DELNDYGEQSVQIYGIWSPLIGESSRVCTHPDNWKLVRRKPEAEDSARENGFDLQGGP
                     AAPWTRGNNCPRAQETDNNGTEQPEERPAPWPQLPDGIEVNEWMRSLKRHERRALMRS
                     LRDKQAKNSSDEMQSWTQSRKQQRPLPDNHELLAREWRESAESLGLHIGEQQMQHLLR
                     GGSLYVDGSIIAPQGFEIVRKPDTRPDSRITQLWQRLSRNHGVSSTEIRHNPVASYLA
                     QLGASDPEAATRLASTLQQDQNTMKTPVTALSDMLRAIRDAEHAQRISETTERARRKA
                     DLLRGGLTSGNKKQTETGLTNPVNEQKTRSDI"
     gene            13027..13986
                     /locus_tag="RHX79_001792"
     CDS             13027..13986
                     /locus_tag="RHX79_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid segregation protein ParM"
                     /protein_id="HDV2196978.1"
                     /translation="MKICIDDGSTNIKLAWTENGERRNAISPNSFKSEWSAPFGGTQP
                     ANYMLDGVRYGFDPVSDRFVQTTDTQYQYSDVNVIAIHHALVKSGITPQEVDVVVTLP
                     LSEYFDTNAQPDMANISRKKANVMRPVEYQNGEAFTIRNVRVMPESIPAGFKALADMS
                     PFESLLIVDLGGTTLDVAKVQGQLAGISQVFCDPHVGVSLMADAVLSVMATNGMRTSH
                     HIANTIIEHRHDEAWLRQHIHNDAHYDSLMAVIREKEETLKQRVIRALAGFSGYGRVM
                     VVGGGAEIVAPAIREACGVNATFIADGVPQFALVNGLYAMDKE"
     gene            13991..14302
                     /locus_tag="RHX79_001793"
     CDS             13991..14302
                     /locus_tag="RHX79_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012907691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid partitioning/stability family protein"
                     /protein_id="HDV2196979.1"
                     /translation="MTTPTRRISFYLKPVAVKNEGEACAWLDSLTPEARKSGQRVAFL
                     AGLALLKMNPAEAYRLAAWADDEALSVTQTRTERPVSQPVPTTQITSQMAGNIRALFP
                     E"
     gene            14363..14887
                     /locus_tag="RHX79_001794"
     CDS             14363..14887
                     /locus_tag="RHX79_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000759753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2196980.1"
                     /translation="MKKYEYMLMKEALRAGLAPCPVSVEAVVGNTIFRTLRNRVSVKM
                     IHQPPKSTSMIYLPLPEAIKLMRSLKFAIWMQTQLNKAVQNTFVKKLMPELAARCAKC
                     TRPALQFDLSLIQQATEAELYRLSPLHDAHTEASEMFRLMFQFNFAVRRTRVQVNRMM
                     QAQEELTQHKGGNQ"
     gene            14884..15474
                     /locus_tag="RHX79_001795"
     CDS             14884..15474
                     /locus_tag="RHX79_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001289969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HDV2196981.1"
                     /translation="MSKIDYQALRERYSPAPVPKCPICGEEMSIQRISGAQVVYACSG
                     YGDDGDFKIGRTLADEHYEKSRVTVLDVGDPEVLALLDWLETKDNRIAELEKIATDYA
                     LKFQKAQDALKYAALLHSRTAQQTNNFAVSLPDISEYFINDVFQPLRYERDVERAIIK
                     AGGKALWQEKHEDRTHQSCDVNCGWFSPLTTDKNNT"
     gene            complement(15965..17011)
                     /locus_tag="RHX79_001796"
     CDS             complement(15965..17011)
                     /locus_tag="RHX79_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001706445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDV2196982.1"
                     /translation="MSRKNKKVRMSSRIDLADALRKESSLSAFTFDGPYRLTGHDLLD
                     NMYCADNGRWYETPVDWYGLARAARQTSWHQSALYFKRNVLLGCYIPHPLLSRQDFSA
                     LALDWFVFGNAFLELRSNMLGEPLKLRHALAKYMRRGSDLESWWYVQDGKDAFQFRPG
                     KVCHLMNPDINQEIYGMPEYLGALLSASLSHSADMFRKLYYDNGSHAGCIIYIGAAQV
                     NRESMDSLKETLQGARGGGAFKNVLIHAPNGGKEGVQILPFQQITAKDEFMNVKAASR
                     DDVLAAHRVPPQLMGAMPGEKSAFGDVEKAARVYAINELMPVMEAMKHINDWLGEEVI
                     RFNPYALLDTQPTS"
     gene            complement(17011..18762)
                     /locus_tag="RHX79_001797"
     CDS             complement(17011..18762)
                     /locus_tag="RHX79_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HDV2196983.1"
                     /translation="MIQDAFVRQRARQLYWQGYPPAEISRLMGINPNTIYAWKKRDQW
                     DETPPVQRVTQSIDARLIQLTEKQNKTGGDFKEIDLLTRQLKKLHDGQPDVMAAGKKG
                     RAKKLKNHFTPEQIAALREKIISRLEWHQRGWFDSLTLCREAGIRNRMILKSRQIGAT
                     WYFAQEALLMALRDDVAQPYQRNQIFLSASRRQAFQFKSIIQKAAAEVDVELKGGDKI
                     ILSNGAELHFLGTSAASAQSYTGNFYFDEFFWVSRFAELRKVAGAMATLSGLRRTYFS
                     TPSTETHEAYAYWNGDRWNEKKASHKRQRFSVDWKTLHNGLICPDRTWRQIVTLEDVV
                     NHGWKHTDIDEIRDENTEDEFLNLYMCEFVREGESAFNLNIMIGCGVDGYDDWKDWKP
                     FAPRPMGNRPVWIGYDANGSSGNGDSGAVSVVVPPAVPGGRFRTVETRRVQGLEFEEQ
                     ARVIEEFTYRYNVEHIGIDVTGGNGEAVYQIVKRFFPAAIPYTFTLSSKRSLVLKMLQ
                     IMRAGRWEYDRAERELVAAFNAVRKVKTPGGFITYETDRARGISHGDLAWATMLAVIN
                     EPIGGEGENERFTVMEF"
     gene            18917..19753
                     /locus_tag="RHX79_001798"
     CDS             18917..19753
                     /locus_tag="RHX79_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001262634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HDV2196984.1"
                     /translation="MANEKKTSRKKFRVAVSGSTVDGREISPVHLREAAENFNPDVYA
                     ARVNVEHYLSPCPSSEFSAMGDVTALSTEDITEGPLAGRTALYAEIEPTERMKQLVAD
                     GKKIYSSIELHPQFSVNGRAYLVGLAMTDTPASLGTERLKFTAQQRQAVMTFNSVQGE
                     APLISEAIESEIIEMAEQRQEEGTQWFNRVMGIIGRGRKADDASFSRIQEAVEGVATS
                     QADIIDRFNVLETRHQQDRQKITSLTTELAALKEKLRTQDGDPQNRFTATGAASDQLA
                     DF"
     gene            19777..20829
                     /locus_tag="RHX79_001799"
     CDS             19777..20829
                     /locus_tag="RHX79_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020218748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HDV2196985.1"
                     /translation="MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPSVQQR
                     FENAVKESTEFTKKINVFGVTDQKGEKILLDTTGPIARTNTSYDGTKRRNPNNVVDLK
                     NRKYQCEQVNYDTFISYPQLDAWAAHPDFQSRVSTQIARQVALDRIMIGFNGTSHADE
                     SNFSTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHAGKYANADALVQD
                     ARSSLLDEWHKEADDLVVIMGRNLFNSLRLPVLNSISGQNPNAELLAGQLILSSRAIG
                     GLDVFLAPFFPDSTMLITSFNNLSIYWQKGTMRRLMKDEPEYNRIATYQSINDAYVVE
                     DYGKCAMVTGLKFADS"
     gene            20875..21675
                     /locus_tag="RHX79_001800"
     CDS             20875..21675
                     /locus_tag="RHX79_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000632360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HDV2196986.1"
                     /translation="MITPAQQHWQNVMAQRAGRAKEGVDHAARTAHEEVLYRLRLAQA
                     RLKGVQARSAKAAIKKELLPDFSGWIEGTLEADGGQQDEVIATLMVWAIDCGDLPLAL
                     RIGAYVVRHNLIMPDNFGRTAATVLTEEICNPVLTQAGTDADADLSAFIEPLNTLWEI
                     VANQDMPDEVRAKLCKACAFARRGLSDADSMALSLKLLREAMHLNPNAGVKREIATLS
                     RALKKADSAAAPEDASTPQAQDESSKSKKTTRKPATRKTTATQKAKRG"
     gene            21778..22272
                     /locus_tag="RHX79_001801"
     CDS             21778..22272
                     /locus_tag="RHX79_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HDV2196987.1"
                     /translation="MSMVARTNPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAI
                     RLPGRVTTSRLLHTATGAVAHVTRELEAWQQEQQAAGHQTLADVPAPVINGESVNLWH
                     WRNAVYTATRALILERYRDADTTDKGDRRADALDIQTSDLWRDVSWAISDILRRPRIF
                     AELC"
     gene            22272..22472
                     /locus_tag="RHX79_001802"
     CDS             22272..22472
                     /locus_tag="RHX79_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000864894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDV2196988.1"
                     /translation="MKVKALESDTVDSLCFRYYGTTQGVTEKVLDANPGLCQQVFLDA
                     GQEVEMPEPEKKKREMIQLWGE"
     gene            22475..22798
                     /locus_tag="RHX79_001803"
     CDS             22475..22798
                     /locus_tag="RHX79_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDV2196989.1"
                     /translation="MSTIQTGITEQVIAWLFDHLPTVYAVGAAVSISALMSLYDGRTL
                     VQTVTGSLACGVLAMAVAGSLRFFGFPEDAVTFIGASIGFMGAEKARDKVIAAFNRRV
                     KEKDE"
     gene            22795..23187
                     /locus_tag="RHX79_001804"
     CDS             22795..23187
                     /locus_tag="RHX79_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000072320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HDV2196990.1"
                     /translation="MSNTFKFSSRSEKNLQGVNPDLVKVTRRALEISEVDFGITEGLR
                     SRYRQKQLVATGKSQTMNSRHLTGHAVDVVAYIGSQVSWEWPLYEKIAAAFRQASREL
                     NIPVEWGGDWKTLKDGPHFQLPHGVYPA"
     gene            23184..23591
                     /locus_tag="RHX79_001805"
     CDS             23184..23591
                     /locus_tag="RHX79_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000780564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HDV2196991.1"
                     /translation="MKLWPTLGVAFLLIAAWGASMRLSWSLGRENARNEAQASTLKST
                     VDTLNIISAGVQDMQQVLAQLRAENQQRNQDGEARREQLRNDIAKDECAHALPDARFT
                     DRLRRHAERATASAVSPAYTADADHTGNASPLP"
     gene            23729..24196
                     /locus_tag="RHX79_001806"
     CDS             23729..24196
                     /locus_tag="RHX79_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2196992.1"
                     /translation="MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFV
                     YRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADL
                     LFTLPLRERVRITRNSQGTPQAEHLPEPKPRLPSSEGDWSHVFQDVTWGESDG"
     gene            24189..24824
                     /locus_tag="RHX79_001807"
     CDS             24189..24824
                     /locus_tag="RHX79_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000356302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDV2196993.1"
                     /translation="MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIR
                     SQKAPDGTAWTPRRRRVTRIQERIRFIWNNEARTLKNWHHDTGKYGRTITGWDEDKNN
                     IRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAA
                     RIARIHQFGERDQVAPGIFTDYPVRELLGISQADERLIYNTVLGRIAEAVR"
     gene            24836..25402
                     /locus_tag="RHX79_001808"
     CDS             24836..25402
                     /locus_tag="RHX79_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDV2196994.1"
                     /translation="MRLLSNIIRTGIISEVDEESWCVRVRSGELETGWLRWNTTRAGA
                     FNVWLPPSPGEQVVIACIGGNPETAMIIGSLWSDASPAPGKSLKEIVISAPDGAVFRY
                     DADAGALSASGMKTATLQASVSVTLDTPVVECTNLLRTATLDVTKGGKMSGNITHSGG
                     DFTSNGITVHTHKHGGVKGGSDSTGGPQ"
     gene            25420..25749
                     /locus_tag="RHX79_001809"
     CDS             25420..25749
                     /locus_tag="RHX79_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001705832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDV2196995.1"
                     /translation="MNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLI
                     DEPMNNTTRLQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVMQTMQNVE
                     LTITLRE"
     gene            25753..26649
                     /locus_tag="RHX79_001810"
     CDS             25753..26649
                     /locus_tag="RHX79_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDV2196996.1"
                     /translation="MPAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVS
                     AALELESEPLNVIAQTMSFREMLLRQRVNEGARACMLSHSAGTDLDNLAGNMNTKRLV
                     ITPATDTTDAVMESDTSLRLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPS
                     PACVTVSILSTEGDGTATEALLNTVRAVLNAEDTRPVADRLTVQSASIVTWRLNAKLY
                     FYPGPESEPILAAAESSFRKWLAEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNM
                     AISDIQAARCESFTISEGGRNE"
     gene            26642..27172
                     /locus_tag="RHX79_001811"
     CDS             26642..27172
                     /locus_tag="RHX79_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000071700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HDV2196997.1"
                     /translation="MSNSLLPPSASNFMRCAEAVGARITNIPVDLNTLWSPDTCPVHL
                     LPYLAWAFSVDRWDRNWPEDTKRQVIRDAWLIHRHKGTISALRRAIEPLGYLIRVSEW
                     WEFGGEPGTFTVEVGTLDSGVTEEMYLEMERLIADARPVSRHMTGLNIIQEIPGDIFA
                     AAATYDGEVITIYPDD"
     gene            27175..29160
                     /locus_tag="RHX79_001812"
     CDS             27175..29160
                     /locus_tag="RHX79_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HDV2196998.1"
                     /translation="MSTTTRKFKTVITDTGAKKLAQAAAPDGKPVRLTHMAVGDGGGT
                     LPTPDSKQTRLVHEVWRHTVNRVILDATHQNRIIAELVIPPETGGFWIREIGVFDEHG
                     DLIAVGNTAESYKPAVAEGSGRAQTFRTILTVSSTATVALTVDNTMVMATVDYVDDKL
                     KEHEQSRRHPDASLTAKGFVQLSSATNSVSETQAATPKAVKAAYDLANGKYTAQDAST
                     TRKGLVQLSSATNSTSETQAATPKAVKAAYDLANAKYTAQDATTAQKGIVQLSSATNS
                     TSETLAATSKAVKAVMDETNKKAPLNSPALTGTPTTPTARQGTNNTQIASTAFVMAAI
                     AALVDSSPDALNTLNELAAALGNDPNFATTMTNALAGKQPKDATLTALAGLATAADRF
                     PYFTGNDVASLATLTKVGRDILAKSTVAAVIEYLGLRELGTSGEKIPLLSTANTWTNR
                     QTLSGGLSGELSGNAATATKLKTARKIAGVGFDGSSDISISAKNVNAFALRQTGNTVN
                     GDTSVGWNWDSGAYNALIGGASALILHFNINAGSCPAVQFRVNYKNGGISYRSARDGY
                     GFELGWSDFYTTTRKPSAGDVGAYTQAECNSRFITGIRLGGLSSVQTWNGPGWSDRSG
                     YVVTGSVNGNRDELIDTTQARPIQYCINGTWYNAGSI"
     gene            29163..29696
                     /locus_tag="RHX79_001813"
     CDS             29163..29696
                     /locus_tag="RHX79_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000972171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HDV2196999.1"
                     /translation="MMHLKNIIAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNF
                     QPDTLKMVYDHNGVIICIEKDVSAINPEGASVVELPDITANRRADISGKWMFKDGVVI
                     KRTYTEEEQRQQAENEKQSLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLFAQKV
                     ESTDTSSLPVTFPEQPE"
     gene            complement(29725..30252)
                     /locus_tag="RHX79_001814"
     CDS             complement(29725..30252)
                     /locus_tag="RHX79_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001762409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HDV2197000.1"
                     /translation="MQHLKNIKSGNPKTKEQYQLTKNFDVIWLWSEDGKNWYEEVNNF
                     QDDTIKIVYDENNIIVAITKDASTLNPEGFSVVEIPDITANRRADDSGKWVFKDGTVV
                     KRIYTADEQQQQAESQKAALLSEAESVIQFLERAVRLNMATDEERTRLEAWERYSVLV
                     SRVDTAKPEWPQKPE"
     gene            complement(30256..31092)
                     /locus_tag="RHX79_001815"
     CDS             complement(30256..31092)
                     /locus_tag="RHX79_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2197001.1"
                     /translation="MQKNGDTLSGGLTFENDSILAWIRNTDWAKIGFKNDADGDTDSY
                     MWFETGDNGNEYFKWRSRQSTTTKDLMTLKWDALNILVNAVINGSLGVGSTNALGGSS
                     IVLGDNDTGFKQNGDGILDVYANSQRVFRFQNGVAIAFKNIQAGDGKKFTLSSSNNST
                     KNATFNLWGASTRPVVAELGDEAGWHFYSQRNTDNSVIFSVNGQIQPSNWGNFDSRYV
                     KDVRLGTRVVQLMARGGRYEKAGHAITGLRIIGEVDGDDEAIFRPIQKYINGTWYNVA
                     QV"
BASE COUNT         8000 a         8250 c         7821 g         7048 t
ORIGIN      
        1 cgtcttttcc ggccattgtc gcagcgctgt aacgcgtaaa atagtgcttt ctcttactct
       61 tctggctgga ccatgagact tctgattctg actctttcat taataacgct ggcggggtgt
      121 acggttactc gccaggccca tgtgagcgaa gttgacgcgg caacaggtat tgtacggttg
      181 gtttatgacc aggctttttt gcagcatgcc cataccgatc gttatgtcag tcgcgggatc
      241 gccgatcgcg catgccagca ggaaggctat acccacgcgg tcccctttgg tcagccagta
      301 ggcaactgta gcctttttgc gggttcctta tgtttgaata cggaattcac tttgtcatat
      361 cagtgccatc attccgcctt ccctgtcttt ctctaaatat tttaatcagc gaggggatct
      421 tcgctgatta aagaaatagc ggtaatgcgt tttattccca ttcgtatttt taataattga
      481 agtttatatt ttaccttttg caaataataa aataacaaat tatagtgacg ccacagcaac
      541 aaatataacc tttgtggagc actatcatgc tgaaaccaga aatgattgaa aaacttaatg
      601 agcagatgaa cctggaactg tactcttcac tgctttatca gcaaatgagc gcctggtgca
      661 gctatcatac cttcgaaggt gctgccgcgt tcctgcgccg tcacgcccag gaagagatga
      721 cgcatatgca gcgtctgttt gattacctga ctgataccgg caatttaccg cgtattaata
      781 ccgttgaatc tccgtttgct gaatattcct cacttgatga attattccag gaaacctata
      841 aacacgaaca attaatcacc cagaaaatta acgaactggc tcatgctgca atgaccaatc
      901 aggactaccc aacatttaat ttcctgcaat ggtatgtttc tgagcagcat gaagaagaga
      961 aactgttcaa atcgattatt gataaattaa gcctggcagg caaaagcggc gaaggtctgt
     1021 attttatcga caaagaactc tctaccctcg acacacaaaa ctaatgctct ccggcggcag
     1081 gtttactgcc gccgtttcaa atcagtgacg gcaaatctta ctctgatcgg tcgaaaaacc
     1141 gtctttcgaa ggtataaatt tgccttttgc tgccagaaac gctaccagct ctcccgctgt
     1201 catcccttct gccgagcagg tgtgaaaacg tgcctgttca ccaaaacgcg ctttaatcgc
     1261 agcttccaga ctggcatgcg tatattgctc gcctgattca atcatcatat ttaacacttc
     1321 atgaccgtga atagagtcca tcgtccctcc tcaaaaaaag cctagcgtag cgattgccgc
     1381 ttatgaagac tttgcgccag cgcaggactg aatgcttttt attgtacatt tatatttaca
     1441 ccatatgtaa cgtcggtttg acgaagcagc cgttatgcct taacctgcgc cgcagatatc
     1501 actcataaag atcgtcagga cagaagaaag cgtgaaaaac agaaccctgg gaagtgtttt
     1561 tatcgtggcg ggaaccacaa ttggcgcagg catgctggca atgccgctgg ctgcggccgg
     1621 tgttggtttt agcgttacgt taatcttgtt gattgggctt tgggcgttga tgtgctacac
     1681 ggcgctatta ctgctggagg tgtaccagca tgttccggca gataccggtc tgggcacgct
     1741 ggcaaaacgc tatctgggac gctacggtca atggctgacg ggcttcagta tgatgttctt
     1801 aatgtatgct ctgactgcgg catacatcag cggtgccggt gaattgttgg cctccagcat
     1861 cagcgactgg acaggtattt ctatgtcggc aaccgctggc gtgctgttgt tcacttttgt
     1921 tgccggtggc gtggtttgtg tcggaacttc actggtcgat ttatttaacc gttttctgtt
     1981 cagcgccaag attatttttc tggtggtaat gctggtacta ctgctgccgc atattcacaa
     2041 agtgaatctt ttaaccctgc cgttgcaaca ggggctggct ctgtctgcaa tcccggtgat
     2101 ttttacgtcg tttggttttc acggtagcgt gccgagtatt gtcagctata tggatggcaa
     2161 cattcgtaag ctacgctggg tgtttataat cggtagtgcg atccccctgg tggcatatat
     2221 tttctggcag gtggcgacgc ttggcagcat tgattcaaca acctttatgg gattgctggc
     2281 taatcatgct ggattaaacg ggctgttaca ggcgttacgc gaaatggtgg cctctccgca
     2341 tgttgagctg gcagtgcatt tatttgctga tttagccctc gccacgtcat ttctcggcgt
     2401 tgcgttaggc ttatttgatt atctggctga tttatttcag cgttcaaata ccgttggtgg
     2461 acggttgcaa actggtgcaa ttacgtttct gccgccgttg gcgtttgcac tgttttatcc
     2521 acgaggattt gtgatggcgc tgggttacgc cggtgtggcg ctggcggtac tggcattgat
     2581 tatcccttcg ctgttgacct ggcaaagcag aaagcacaat cctcaggcgg gttaccgggt
     2641 caaaggtggt cgtccggcgc tggtggtggt gtttctctgt ggtattgctg tgattggcgt
     2701 gcaatttttg attgcggcag agttgttacc agaagtgggg tgatcagata gcctcaaatt
     2761 ccttattggg tgccagaatt aacgctgaca cccaatttgg cctcttaatg caggcagcac
     2821 tgcttaaatt tcttaccact accgcacggg caaggatcgt tacgccccgg tttctcttct
     2881 gctttgatcg gttgctgaac agctttttcc tgcggatgcg ccatccagta cgcatgtaga
     2941 tcaagcgccg ccagtcgaat ggcatctacg ctctcttcaa acgcttctgg cgacatcttt
     3001 tctacccgct cgaagttttc ctcagtaccg tgcagcgcaa tcgcctccag cgctggtttt
     3061 aacgaatcgg gcaacgttga ccagtcagaa agtgccacgc cccgcatata gccaaagcac
     3121 cactcctcaa caatcgtcag ctcgctgcca tcaacttctc gcaagccgaa taacggctca
     3181 aactgctccg ggaattcgtt cagacgctct gcggtatcgg ccatatgttg aaaagccaga
     3241 ttcataaagc gcgtcatctc tttctctgac gcccagcgcg gcacatagtc agccccaccc
     3301 cacacggcaa ccagccactg ttccggttca atctcttgcg gagaactcaa caccgccgtc
     3361 aataaaccgt ccagctccgc cacatcaagg atggcgtggt cagtgttgta tttggtcaga
     3421 atatcgtcca gccattccaa ctcactttcg tttaacggtc ccgttttcat acgcttttcc
     3481 ttgtggatct caactcgcca gcacctatct tacatgccgg tccgtatcag agatactttt
     3541 tgagtggctt tgctggtgat taaaaattaa ggagggtgta acgacaagtt gcaggcacaa
     3601 aaaaaccacc cgaaggtggt ttcacgacac tgcttattgc tttgatttta ttcttatctt
     3661 tcccatggta cccggagcgg gacttgaacc cgcacagcgc gaacgccgag ggattttaaa
     3721 aactatcaac caccatttat aaatcataac attatgattt tattaacttt gaaaatggct
     3781 ctatacaacg ccatttgaat ctattgtcac tttttatcgc cactttttac cctctattgt
     3841 caaaagggtt caattcaaca gcagcctcta aatgacctgg agcaaaatgc gcataacgca
     3901 tagtcatttt tatatcgcta tgccccagta ttttttgcaa cacaagaata tttccgcccc
     3961 gcatcataaa atgactggca aacgtgtgac gtagcacatg agttaattgc ccatcaggaa
     4021 gctcgatctt cgctctctta attgcagcgt caaaagcctc ataacatggt gaaaatagcg
     4081 ctcctcgttt tttgggaagc atagcctgca attgaggtga aatcggtaca gtgcggttct
     4141 tctttccttt agttttaaca aatgtgattc gaccgggcag tacttgagat tgctttaatc
     4201 cttctgcttc actccaccga gcaccagtcg caagcccaat acggacaaca acccccaaat
     4261 ctttattccg tgactcatca cacgcaatca gaaggcgttc aatctcatct acatacagaa
     4321 acgccagttc cttttcttcc tcacgaaact tgcgaatacc agtcaggggg ttttcaccag
     4381 accactcccc aaggcgcttc agttcggcaa aaacagcatg tagatatgac tgctcgcgat
     4441 taacggttgc ttcactaagt tttttcttcc ccttgggatt ccattctcct gatagccttc
     4501 tttcccgata agtggcaaac atatttttgt caaactgaga agcaaatgga tctcccagcc
     4561 tggaacaaat cgcctcaagt ttgactttgc gctctgcacc agaggacaag gttttaccgt
     4621 acatctcaaa ccaacgagca atcaactcag aaagacgagg accagaacca tcttgaaact
     4681 cgtctccaac tctactattc attaaacggc gctcataaga gagcgcctca ctttttgtcg
     4741 caaactgttt acgaatgcgt tttcccgatg ccccgtaggg ataacattcg caaagccatt
     4801 tacctgatgg aatcttacga accgacattt tagttactta tcacataaat caaatgcagc
     4861 cttagtgaca tcccccagac tcttttttaa ccctggggcg gcatcattat ctagccaaaa
     4921 tggattattg ttatctaacg gtaacgcacc aaatgtttta ccttttattc gagccaaacc
     4981 tgtaagtgca tataacttat tatcgtcaaa attcatcaca taaggattac catcaagaca
     5041 ctgtaattga acctcatcag aattaaatgg ccatacccca ttgaaactct cacgttcaat
     5101 agttttaaaa ggcattgcga cggcggaaaa agaaaacata gataaaaaag taactaatag
     5161 ttgaaccttt tttactttca tatcattacc tcaatttagc tcaagtaaga ttacaaatta
     5221 aaaaacgccc tagaaatgac accgcctacc aaaaccccta cgcagataaa gaatattatt
     5281 tcttttggat aaagtcggat taattctgaa gcacgaagtc ggacttctgg taaggtcgaa
     5341 ctctctgtgt ggcttgatgc cgattgttgc tctaaccacg acaatgcaga ctgtaactga
     5401 gaacgagtaa gatcgtttaa acgtcctgta ccgaaattga tatggcaata ccgcagaagt
     5461 ttttgtcgaa gtccacagtc ttcactgtta cgtagtaata aacttacaag agccttacag
     5521 gcatcatgat ctttacatcg ctcaagcatt gcatgcagaa aactctccgc tgttttatat
     5581 tgatttactg tcatatcatc aataccagct acaccaatct ccgcatgtac tttttgccaa
     5641 ataataaacg cttcagtatt gctagcttct gcaatagcag caaccaagct atttagctcc
     5701 ttacgctgag ccttaagcaa agggcgatcg tcatcatcat tattcgaagg gattgcgata
     5761 ttgacagtat gagaaccatc atatcgctct atctgaatat tcttttcgtg aaaatcacgc
     5821 ccagcaacgc gattgtttga accgtttgag ttgacggcca tgtcacctcc ctactatcac
     5881 ctacccttag tttcgttata gtcacgacca gcgatacggt tattaccacc agaaatattt
     5941 aactcacgtc ctgatggctg agtttccttt tcactgatcg caccttttaa agccccaatc
     6001 accgcgtttt tcacatctaa cgaagctgct cgaaagcgag taatcaactc ctgctcatca
     6061 tcgttataag tttcaggtga gtgaattccc aacacaacat actgaacatc aaggccaaaa
     6121 cgagacagcg ctgccaaata cgcagcatca ggaaagctat ctcctttctc atatctaagc
     6181 tgagttagct ttttgactcc accaatgtcg ctcatggcaa cttgactaag tcccaatctt
     6241 tccctttcct cacgcaaccg ctgaccaata tcatttttca tacaaaaacc ttgacaggta
     6301 tcttttttga taccaaaatg atttcacgag ctattagatg atcacaatat accactatga
     6361 aacaagttct tcacgatacc agatcacgca ttccgcgtaa caccgccaca ggtccaagac
     6421 tggcacttcg gctgtccctc gaggagcgag ccgtcattga tgaaatggca gctaaagaac
     6481 aacgctcatc ctctaacatg gcgcgcatga tcttccttcg cggcctagag ctaacccaga
     6541 aagaacaaaa caaatcttcc tgatcaggag gctagtggga tgtcaggtat aaccatcaat
     6601 atcaatgtga atgcccccta tgtatccctg cagaaatatg cagagataac aggtatccct
     6661 cttaatacgt gcaaaaagat gttggctgac ggtcgaatta ttatccgccc caaacgcgcc
     6721 aaaatggaaa agcctgaagt aaaccttgtg gcgatgttaa aagacgcttt ggctaacagc
     6781 taaaacaatg aacagagcac catcatgaaa aaaaacgcta ataatccata ctccaaattt
     6841 cgtaatggcg tagaacgcca tgtacaccac gtcgctacca gtgcatcacg tagtaacagt
     6901 cgctataacc tgaacgagac gcacgcaaca ccggatggcc acgctgtaaa acaaatcggc
     6961 gagcatgcct ggctgattga gaaagctgga atcgtggtcc acaaatgccc acgcaatccg
     7021 tttaccggaa accgcatttt tgcattgaac tacggcgaca atcacttcgg gcaggatttc
     7081 acattatacg aagcacttcg cacagttgat cgtctgcttc gcgggcaaag ttttattaaa
     7141 caggctgatt tataacaggt gctttatgac caaagagcat gcacaaggtg tatttatccg
     7201 ttttattgat tttcgcggtg aactgttatt acgcgcatca gctattgatg gagtcgtccc
     7261 atcagaaaaa aatgcagcta cttacgttta tctgaacggc acgcgcctga ccgtagaact
     7321 tccgtaccag actgtacacg aaatcattag cgaagctgaa aaggcacgtc aggttaatgg
     7381 cgataaaccc tatatcgaaa ttatctgcat ggattcagaa gctgaaattc agaaagcaga
     7441 ttaaagggtg ttgcaatgga caaagaatat aaaacactca tcaacaaagc acttgagcgt
     7501 ttttattttc gcttaagcgc atcaggcgtt catgctgaac gtgcagcccg tgactcattg
     7561 accagggcaa tccggagtct gtatgacgtg gctttttacg ctgatgatct ggatgcactt
     7621 aacgaacttt ccgagctgat ctgtgccgca gaatgcggag aacatattga accgtataag
     7681 ctggggaata tcgcatgagt atatttatct catggcttgt tctgattatt tcggtggcct
     7741 gcgccattgg gattatgcga attattaatt cagtgaaaaa gatcgagcgt tttttctctg
     7801 atgaataacg atacaaataa aacatcaaat taaataagaa aacgtgaaaa ccatccgtat
     7861 taacggaggt attcgcacac gcaaataacg gagatacaaa aatgcacgca aaagaagaag
     7921 gtatcatcag agcactgaaa gaaatttcaa agatggaaag cgaagtagcg aaaaaagccg
     7981 tggccaatgc tcacatggac gtcgcaaccc acacaatgat agtcgcaaaa gtcacggcag
     8041 aggctgccaa aatcatcgaa gaacagggtg tggaacttgc gcttctcaaa actaaaccag
     8101 tcaccggact ggatttatct gacaccggac gccttattta cactattggc tcggagccac
     8161 agcgatacac cattatcgcc ggattacaga acaaatacct gatcactcct caccccataa
     8221 gggaatcagc gcttctgaca aatctccgcc tgatagagcg ctctcaagtt gcattcattg
     8281 atgacgcccg acacaccgta tttaacgcat agggttactg gacaaagggg gtgcaatggc
     8341 aattaagcat tttcccgtcg ttcgctttac ctccagaggg cgcgaatacg aggtcgacga
     8401 acgcctgatt accactatcg acaaacatcg ttcggaaacg gatgcacacc acatctacct
     8461 cactgacggt acttacttct gcgccaccaa cgtggcgcgg gtgaatctta tccgacaggt
     8521 acaggagcca cgcagatgac cattctggac tacatcgcta ctcatccggg ttgtagcggc
     8581 ggagagatcg ccgcagcact gaatactcca accacagcca ttaatgctga gttacgccaa
     8641 ctttggcgcg gcggcttagt catcagaaca aaccgcagca caggtggtcg cgctcgcaaa
     8701 actggaggcc aggcttctta ccacgtaaac ccgatgccgt tcgggtgtag caatccactt
     8761 actcacatgt ttaaccagct actaaaggaa gccagaacat gagcaccatc aaccaccaga
     8821 agctacgcga actggcattt gccctgcaac gaatggcaac gcctcaaaaa ttactggcat
     8881 ttcgcgcaat gctctcgccg tctgctgtgc tggcactgct ggatgagctg gagcacgcca
     8941 gaaccacggc tcctgccatt cgcctgacac tccatcatga aatcgctgat ttctgcgcga
     9001 cgttggaggc accaggcgaa ccggaaacgc cggaagcaat acagcaagag ctgctgcaac
     9061 gcattgacaa ggtttttgat ttttttctga accagtaaga aaccagaaca tgcacacaca
     9121 aaaaaaccgc ttgccatgcc gcaatcagtc aggttacatt tccgctgcac ctcataaaac
     9181 gggtgccggg attctcaacc cgatacagag caaagcgcat aaccgcgcca gcggtttttt
     9241 tgtgcgtact gtattgccac gtctttttcg cgtcagaatt atggcggggc gtacggggcc
     9301 gacttcggtc gggccggatt ctttgctctc cggtgttgag aaccctgtac gtctcgccac
     9361 cccgagattc tcaactctgg atggtgagct atttctatca ccgagcaaag aggccacacc
     9421 atggcaaacc gcaaacaaca gcgcgcatac gctgcgcgtc gtcacatcca gactgaaatc
     9481 aaccgtagac ttttccgcgc atcacgcgtc gcgcaaatca tgcacatcaa tatgctgcat
     9541 gagcgcagcc acgcgctatc gaacatctat tccgcctctg ttttcagcta tctggcggat
     9601 gatctgcgcg agctgcaaca actcttccag tagcaaaaca aactccatta attcctgttc
     9661 cgggcctttc ctgcaccttg cggcgggagg ccttcgcaca tctgtagtaa agagaattgc
     9721 agcatgattg acgctcatga cttcacaaga tgggtgcgca cacaggacac ccgtctggct
     9781 cccgttcttc agggattatt tgatctctac atccgtggtc gtgacaacag agcacgcacc
     9841 acaaaaccag agaatgcaga caccctttat ttcacagtag acgactgcta ccgcgtggac
     9901 ttcacaccac acgggctggc gttgcactgc ctgacaccac acggagaatc actgctggcg
     9961 tattacgact ccccggcctc cgtatttgcg gcaatgctgg cgcatcgcac tgctggcggg
    10021 tgtgcctcgc tgagtgaata caccgctgaa tttaaccgcc tttctgccct cttctcgcag
    10081 gagtggcagc gcgtgacggg ataccagcca tgagtgagtt tgcatggagc tggaatgaac
    10141 cacggccagc cattgatccg gccagattta cggagcacag gcaggaaact gaaaccgacc
    10201 tgcaacgcgc catccgttac taccttgagg cggacaaaaa ggcccgggaa gaacaggaag
    10261 cgaaggagga agcctttttc gcacaatccg ccatgggtaa aaaactcatg gcatcccttg
    10321 aggaagccgg acagcgtgaa aagctggcac agagcatcat cagtaagcgc cgggcaacag
    10381 aacaagaccc ggtggcccgt gcctttgcca cactgaaggc gcttcccgtt tatctgcgag
    10441 aacctctgag ccgccacctc tctttcctgc gcaagaagca ggaagccgat cgtcagaaag
    10501 gcaaaaagag ctggcaggcg gaacgctatg cacgcggaac cctgcgcaaa atattcgaac
    10561 gtctggaccg caccgacagc cgctggctga caccgggtta tcgctccctt gccggacgcg
    10621 aacgcctgga cgatttgctt tacctgccgc agctcaacaa acaccagata cagacgctgg
    10681 ccaccatgac ggcggcgatg ttcagcagca ccttcgaaaa actctgcgat ggctttggcg
    10741 cgactgatgg cgaactgacc atggatgtaa cgctgaaggc gtatcagatg ctggcccgca
    10801 tggcgttaca cctgcacgcc atgcctccac attatgacgc actgacaaca gacaaagacc
    10861 ggaggaacga accggacacg gagctgctgc cgggcgcaat ccttcgcctg acctgtgcgg
    10921 aatggtggaa acgcaaactg tggctgttac gttgcgagtg gagagaagaa caactccgcg
    10981 ccgcctgtct ggtttccaga aaaacatcac cctatctgag ccaggacgcg ttaagcgagt
    11041 ttcgcgcaca gcgcgagaaa acacgcgatt tcctgaaaag ttttatgctg gaaaacgaag
    11101 acgggttcac gattgatctc gaaacagtgt attacgcggg agtaagtaac ccggttcacc
    11161 gtaaggcaga aatgatggcc accatgaagg ggctggaact tctggccgaa gcccgtggcg
    11221 acaaagcggt gtttctgact gtcacctgcc cgtcaaaata ccacgccaca acagagaacg
    11281 gtcatccgaa tcccaaatgg aacggggcca ccatgcgcga ctccagcgat tacctggtta
    11341 acacgttttt tgcggcggtc cgcaagaaac tgaaccgcga cggcctgcgc tggtatggca
    11401 tccgcacggt ggagcctcac catgacggca ccgtgcactg gcatatgatg gtctttgctc
    11461 atccggaaga aatcgacacc attgtgtccc acacccgcga tattgccatt caggaagatc
    11521 gtcacgagct gggtgatgat attaccccac gctttaaggc ggagtacgtc gacggctcaa
    11581 aaggtacgcc aaccagctac atcgccacct acatcggaaa gaacctggac agccgcgccg
    11641 tggatggcat cgacccgaaa acgggcaagc cacgcgttga ccacgaaacc ggaaaatcaa
    11701 tggccgagag cgtggaacgc gccatcggct gggcgcgcct tcaccgtgtc cgccagttcc
    11761 agttctttgg tatcccctcc cgtcaggtgt ggcgtgaact ccgccgcctt gccagccaga
    11821 tggcacgcaa cccggaaggc ccgcaacggc tgaaggatga cgcaatggat gcggtactcg
    11881 ctgccgctga tgccggatgt tttgccacct acatagagaa acagggcggc gtacttgttc
    11941 cacgcaaaga ctacctgatt cgcaccgcct acgacctcgc agatgagctg aacgattacg
    12001 gcgaacagag tgtacagatt tacgggatct ggtcgccgct catcggggaa tcctcccgtg
    12061 tgtgcacgca tccggataac tggaagctgg taagacgtaa accggaagcg gaagacagcg
    12121 cccgcgaaaa tggttttgac cttcagggcg gccctgccgc cccttggact cgtggcaata
    12181 actgtccccg tgcacaggaa acggacaaca acgggacaga acagccggaa gaacggccag
    12241 caccgtggcc gcagcttcct gacggcattg aagtgaacga atggatgcgc tcactgaaac
    12301 ggcacgaacg ccgggcgctg atgcgttcgc ttcgtgacaa acaggcaaaa aacagcagtg
    12361 atgaaatgca gagctggaca cagagccgca aacagcagcg gcctttgcct gataaccacg
    12421 aattactcgc tagagaatgg cgggagtctg ctgaatctct cggcctgcat atcggtgaac
    12481 aacaaatgca gcacctgtta cggggcggca gtctgtacgt tgacggcagc atcattgcac
    12541 cgcagggatt tgaaattgta cgcaaaccgg atacccgccc ggacagccga atcacgcagc
    12601 tctggcagcg cctgagccgt aatcacggtg taagcagcac ggagatccgc cataacccgg
    12661 tcgccagcta tctggcacag ctgggggcat cagaccctga agccgccaca cgcctggcat
    12721 ccacacttca gcaggaccag aacaccatga aaacacccgt taccgcgctt tctgacatgc
    12781 tgcgcgccat ccgcgacgca gagcacgcac agagaatcag tgaaaccact gaacgcgccc
    12841 gccgcaaagc agacctgctg cggggtggcc tgaccagtgg aaacaaaaaa cagacagaaa
    12901 cgggactcac gaatcccgta aatgagcaaa aaacgcgcag cgatatatga agcgcgcaca
    12961 aaacaggcaa aaacgggatt tcagaatccc gtaaacgatt aattaatcaa cataaggaaa
    13021 agcgacatga aaatttgtat cgacgacggc tccaccaaca tcaagctggc atggactgag
    13081 aacggcgaac gccgcaacgc catcagcccg aacagcttca agtcggaatg gtctgcgccg
    13141 ttcggtggta cgcagcccgc gaactacatg cttgatggcg tgcgctatgg ttttgatccg
    13201 gtcagcgatc gctttgtcca gacgaccgac acgcaatacc agtacagcga tgtgaatgtc
    13261 attgccattc atcacgcgct ggtcaaatca ggcatcacgc cacaggaggt ggatgtggtt
    13321 gtcaccctgc cactgagcga gtatttcgac acaaacgcac agccggacat ggctaacatc
    13381 agccgcaaaa aagcgaacgt tatgcgcccg gtggagtacc agaacggcga agcattcact
    13441 atccgtaacg tacgggttat gcctgaatcc attccggctg gctttaaagc actggctgac
    13501 atgagtccgt ttgaatccct gctgattgtg gatttgggcg gaaccacgct ggatgtggca
    13561 aaggttcagg ggcaactggc aggtatcagc caggtgtttt gcgatccaca cgtaggcgtt
    13621 tccctgatgg ccgatgccgt actgtcggtg atggccacta acggtatgcg taccagtcac
    13681 cacatcgcca ataccattat cgaacatcgc catgatgaag cctggctgcg ccagcacatc
    13741 cacaatgacg cgcattacga cagcctgatg gcggttattc gtgaaaagga agaaacactg
    13801 aaacaacgcg tgatccgcgc gctggcgggt ttttcgggtt acgggcgggt gatggttgtc
    13861 ggtggcgggg cggagattgt ggcacccgct atccgcgaag cctgcggagt taatgcgact
    13921 ttcatcgcgg acggggtgcc acagtttgct ctggttaatg ggctgtacgc aatggacaag
    13981 gagtaaacca atgacgacac caaccagacg gataagtttc tatctgaagc ccgtcgccgt
    14041 caagaacgaa ggcgaagcat gtgcctggct ggacagcctt acaccagaag cccgcaaaag
    14101 cggccaacgc gtggcttttc tggccgggct ggcacttctg aaaatgaatc cagcagaggc
    14161 ttaccgactg gctgcatggg ctgacgatga ggcgttatcg gtgacacaaa ccaggacaga
    14221 acgccccgtg tcacagccag taccaaccac acagataacc agtcagatgg cagggaatat
    14281 ccgggcatta tttcctgaat gacgaatttg acggctttta attttatcgg ggtgcactgt
    14341 cgccccgcgc gaggaaaaca cgatgaaaaa atacgaatac atgctaatga aagaagcact
    14401 gcgggctggt ctggctccct gtcctgtatc cgtagaagct gttgttggga acacgatttt
    14461 ccgaacgctg cgaaatcgcg tatccgtgaa gatgattcac caaccaccca aatctaccag
    14521 catgatctat ctgccgctgc ccgaggctat caaacttatg cgttcgctga aatttgcgat
    14581 ttggatgcag acacaactca acaaagcggt gcaaaacacc ttcgttaaga aactgatgcc
    14641 ggagcttgct gccagatgtg caaaatgtac cagacccgca cttcaatttg atctgtcatt
    14701 gattcaacaa gctacggagg cagaactgta ccgcctgtca cctctccatg atgctcacac
    14761 ggaagcctca gaaatgttcc ggctcatgtt tcaatttaat tttgccgttc gacgcacacg
    14821 cgttcaggtc aatcgcatga tgcaggcgca ggaagagctg acgcaacaca aaggaggcaa
    14881 ccagtgagca agattgacta tcaggcatta cgcgaacgtt attcacctgc gccagtaccg
    14941 aaatgcccta tttgcggcga ggaaatgtca attcagcgaa tatctggagc acaggttgtt
    15001 tatgcctgct ccggttatgg tgatgatgga gatttcaaaa ttggccgaac tcttgccgac
    15061 gaacattatg aaaaatcacg cgtaacagtg ttggatgtcg gggatcctga agtattggcg
    15121 ctacttgatt ggctggaaac caaagacaac cgaatcgctg aactggaaaa aatcgccact
    15181 gactatgcac ttaaattcca gaaagcacag gacgcattaa agtatgccgc tttgctgcat
    15241 agccggacgg cgcaacaaac aaataatttt gcagtatcgc ttccggacat aagcgaatat
    15301 ttcattaatg acgtatttca gcccttgcga tacgagcggg atgttgaaag agccatcata
    15361 aaggctggcg gaaaagcatt gtggcaggag aaacacgagg acagaacgca tcagtcctgc
    15421 gatgtaaatt gtggatggtt tagcccactg acgacagata aaaataacac ctgatccccc
    15481 tcaaaccagg gcgataatcg cacatcgccc ttctgcacaa tagtgcacaa atttgcacaa
    15541 tttttttgaa cgactttttg cccttccggc ccgcgtggcg gctggatccg ccaaggatcc
    15601 gtgcgtgcac aaaaaaacac gctttttctg cgcgcaggtg acgggggaac agcccgcgtt
    15661 tcagggggta aatagcattc cccgaacgat gtcgcagaga tacaacagaa tggctgtatt
    15721 tctcacgctg agcgtgaaaa agacgtgagg gcttttgatt tgatggggtg aaaggtaagg
    15781 ccgtcaaaat cgcactgaga cggcgagaac atgcagtcaa cgcggtggga ttgcgtaaga
    15841 gtctgactgt cgatgatggc aatcagcagg aaagcgtcgt gaaattatct gactgataca
    15901 ggagctggag agtcggggca taaatttttt atgccccggc gaagcagcag acaagcgaag
    15961 cgcgtcagga tgtgggctgg gtgtctaaca gtgcgtaagg gttaaagcgg atcacctctt
    16021 cgccaagcca gtcattgatg tgcttcatgg cctccatgac aggcatcagc tcgttaattg
    16081 cgtaaacccg cgcggccttc tccacatcac caaacgcact tttttcgccc ggcatcgccc
    16141 ccatcagttg cggcggaacg cggtgcgcag ccagcacatc atcacgggat gccgccttaa
    16201 cattcatgaa ctcatctttt gcggtgatct gctggaacgg caaaatttgc accccctctt
    16261 tgcccccgtt gggcgcatga atgagcacgt ttttaaacgc accaccacca cgcgcgccct
    16321 gtaacgtttc tttcagggag tccatgcttt cgcggtttac ctgcgctgca ccaatgtaga
    16381 tgatgcaccc ggcgtgggag ccgttgtcgt agtacagttt tctgaacatg tctgccgaat
    16441 gagaaaggct ggccgagagt aatgcgccaa gatattccgg catgccgtag atttcctgat
    16501 taatatccgg attcatcaga tggcacactt tgccagggcg aaactgaaac gcgtccttgc
    16561 catcctgcac ataccaccat gattcaagat cgcttccgcg tcgcatgtat ttcgccagtg
    16621 cgtgccgtaa tttaagcggt tcgccgagca tattgctccg aagctcaagg aatgcgttac
    16681 cgaacacaaa ccagtccagc gccagcgccg agaaatcctg ccgggaaagc agcgggtgcg
    16741 ggatgtagca accgagtaat acattgcgct taaagtaaag cgcagactga tgccaggacg
    16801 tttgccgggc agctcttgcc agaccgtacc agtccaccgg ggtttcatac caccgcccgt
    16861 tatcagcaca gtacatattg tccagcagat catgcccggt caggcgataa ggaccatcaa
    16921 atgtgaatgc actgagcgat gattctttcc tgagcgcatc agcgagatca atgcgtgaac
    16981 tcatgcgcac ttttttattt tttctgctca tcagaactcc ataaccgtga aacgctcgtt
    17041 ttctccttcg ccgccaatcg gttcgttaat gacagcaagc atggttgccc acgcaaggtc
    17101 gccgtggctg atccccctcg cgcggtccgt ttcgtaagtg ataaagccgc ccggtgtttt
    17161 caccttacgc acggcgttaa aggccgcgac cagctcgcgt tcggcgcgat cgtattccca
    17221 ccgcccggca cgcattattt gcagcatttt cagtaccagc gaccgttttg atgacagcgt
    17281 gaaggtgtac ggaatagcag cagggaaaaa acgtttcact atctgataaa cagcctcccc
    17341 gttcccgccc gtcacatcaa tgccgatgtg ttccacgttg tagcgatacg tgaactcttc
    17401 aatgactctg gcctgttctt caaactccag cccctgaacg cgtcgcgtct ccaccgttcg
    17461 aaaacggcca ccaggaacag ccggaggaac caccacggac acagcgccgc tgtcgccgtt
    17521 gccactgctg ccgtttgcgt catacccaat ccataccgga cgattcccca tcgggcgggg
    17581 agcaaaaggt ttccagtctt tccagtcgtc gtatccgtca acaccgcagc caatcatgat
    17641 attcaggtta aatgccgatt ccccttcgcg aacaaactca cacatataga gattgaggaa
    17701 ctcgtcttcg gtattttcat cacgaatttc gtcgatatcg gtgtgtttcc agccgtgatt
    17761 aaccacatct tccagcgtga caatttgccg ccacgtccgg tcagggcaga taagcccgtt
    17821 atgcagcgtt ttccagtcca cagaaaaacg ctggcgttta tgcgaggcct ttttctcgtt
    17881 ccagcggtcg ccgttccagt aggcgtatgc ctcgtgcgtt tcggtggatg gcgtggagaa
    17941 gtaggtgcgc cgcagtccgc tgagggttgc catagcgcca gccaccttgc gcagttcagc
    18001 aaagcgactg acccagaaaa attcatcaaa ataaaaattg cccgtatagg actgtgccga
    18061 cgcagcagaa gtgccgagaa aatgcagctc tgcgccgttg gagaggatga ttttatcgcc
    18121 ccctttcagc tccacatcaa cttcagccgc ggccttctga ataatgcttt taaactggaa
    18181 cgcctgacga cgcgacgcag acaaaaaaat ctggttacgc tggtaaggtt gcgccacatc
    18241 gtcacgcagc gccatcagca gtgcttcctg tgcaaaatac caggtcgccc caatctgtcg
    18301 ggatttcagg atcatcctgt tacgtatccc ggcttccctg caaagggtta gggagtcaaa
    18361 ccagccccgc tgatgccact ccagcctgct gatgattttt tcccgcagtg cggcaatctg
    18421 ttccggcgtg aaatgatttt tgagtttttt cgcccggcct ttctttcctg cggccatcac
    18481 atccggctga ccatcatgca gctttttaag ctgccgggtc agcaggtcta tttccttaaa
    18541 gtcaccgcct gttttattct gtttttcagt aagctggatg aggcgcgcat cgatggactg
    18601 cgtgacacgc tgcacaggtg gcgtttcatc ccactggtcg cgttttttcc acgcataaat
    18661 cgtgttcggg tttattccca tcagacgtga tatttctgcg ggcggataac cctgccagta
    18721 aagttgccgc gcacgctggc gcacaaaagc gtcctgaatc attgctcccc ctgagtaatt
    18781 acaggaagat tacccgcgcg cgaaaccgtt ctccttaacc ccctgttctg gctgttttct
    18841 tacaacaaaa gccctttgta tcagcctgtt acgctttgcc atcatgactg aagaaccagt
    18901 cagaggggca aaaactatgg ctaatgaaaa aaagacatcc cgcaaaaagt ttcgcgtggc
    18961 tgtctcagga tcaactgttg atggccgtga aatcagtccg gtgcatctgc gtgaagccgc
    19021 cgagaacttc aacccggatg tttacgctgc ccgcgtgaac gttgagcact atctctcgcc
    19081 atgcccgtca agcgaatttt ccgcaatggg cgatgtcacc gcactgagta cggaagacat
    19141 tacggaaggt ccgctggccg gacgtactgc gctgtatgca gaaatcgaac cgaccgagcg
    19201 catgaagcag cttgtcgcgg acggcaagaa aatctattcc agtatcgaac tgcacccgca
    19261 gttctccgtt aacgggcgcg cctatctggt cgggctggcg atgaccgaca ccccggcaag
    19321 cctgggcact gagcgcctga aattcacggc acagcaacgt caggcggtaa tgacgttcaa
    19381 cagtgtccag ggtgaagcgc cgcttatctc cgaagccatc gagtctgaaa tcatcgaaat
    19441 ggcagaacaa cgccaggaag aaggcaccca gtggtttaac cgcgtaatgg ggattattgg
    19501 ccgtggccgc aaagcggatg acgccagttt ttcccgtatt caggaagcgg tggaaggcgt
    19561 cgcaacgtca caggccgaca ttatcgaccg ttttaatgtg ctggaaaccc gccatcagca
    19621 ggaccgccag aaaatcacgt cactgaccac agagctggca gcactgaagg aaaaactgcg
    19681 cacgcaggac ggcgatccgc agaaccgctt caccgcaacg ggcgcagcct ccgaccagct
    19741 ggctgacttc tgataagaca aaggagcaaa ttttttatga atctggtgat gtcagatatt
    19801 acccgcaaca agctgggttg ctatatggcg cagcaggcgt cgcttaacaa catcccggta
    19861 tctgcactgg tatcgcgatt taccgtggaa ccctcggtgc agcagcgttt tgaaaacgca
    19921 gtaaaggaga gcactgaatt tacaaaaaaa attaacgtgt tcggtgtgac cgaccagaaa
    19981 ggagaaaaaa tcctcctgga caccaccgga ccgattgcgc gcacgaatac cagttatgac
    20041 ggcacaaaac gccgtaaccc gaataacgtg gttgatctga aaaaccgcaa atatcagtgc
    20101 gaacaggtga actacgacac gtttatttcg tatccgcagc ttgatgcctg ggcggcacac
    20161 cctgattttc agtcacgcgt cagcacacag attgcccggc aggtggcgct tgaccgcatc
    20221 atgatcggtt tcaacggcac gtctcacgca gatgagtcca acttcagcac caacaagctg
    20281 cttcaggacg ttaacgtggg atggctggag cacatcagaa ccgacgccag cgagcgcgta
    20341 atgaatgacg tgacgctgac ctcccgcaac atggacaaca ccgtggcgca cgcgggtaag
    20401 tatgcgaacg ctgatgcact ggtacaggac gcgcgctcat ccctgctgga tgaatggcac
    20461 aaggaagctg acgacctcgt ggtgatcatg gggcgcaacc tgtttaactc gctgcgtctg
    20521 cccgtgctga acagcatcag cggccagaat cccaatgcgg aattacttgc cggacagctc
    20581 atcctgtcat cgcgcgccat tggcggactg gatgtattcc ttgcgccgtt cttcccggat
    20641 tcaacgatgc tgatcacctc gttcaacaac ctgtcgattt actggcagaa aggaacaatg
    20701 cgtcgcctga tgaaagacga gccggaatac aaccgcatcg ccacctacca gtccatcaat
    20761 gacgcttatg tcgttgaaga ctatggcaag tgcgcgatgg tcactggcct gaagttcgcc
    20821 gacagctaat caactcacgg cgggcatcat gcccgcctgt aacggagaga aaaaatgatt
    20881 actcctgcac agcaacactg gcagaacgtg atggcacagc gcgcaggccg ggcgaaagaa
    20941 ggcgtggacc acgccgcgcg taccgcgcat gaagaggtgc tgtatcgtct gcgtctggca
    21001 caggcccggc ttaagggcgt acaggccaga agcgcgaaag ccgccatcaa aaaagagttg
    21061 ttgccggact tttccggctg gattgaggga acgctggagg ctgacggcgg gcagcaggat
    21121 gaagtgattg ccacgctgat ggtgtgggcg attgactgcg gcgatcttcc gctggcgctg
    21181 cgtattggtg catatgtggt ccgtcacaac ctcatcatgc cggataactt tggccgtact
    21241 gctgccacgg tactgaccga agaaatctgc aacccggtac tgacgcaggc cgggacggat
    21301 gccgacgcgg atttgtccgc ctttatcgaa ccactgaaca cactttggga aattgtcgcc
    21361 aaccaggata tgccggacga agtgcgcgcc aaattatgca aggcgtgcgc ctttgcccgc
    21421 cgtggcctga gcgatgcgga cagcatggcc ttatcactga agctgctgcg cgaagcgatg
    21481 cacctgaacc cgaacgcagg tgtgaaacgc gagattgcaa ccctttcccg cgccctgaaa
    21541 aaagccgatt ccgcagccgc accagaagat gccagcacac cgcaggcgca ggacgaaagc
    21601 agcaaaagta aaaagacaac gcggaagcct gcaacacgaa aaaccaccgc gacgcagaag
    21661 gcgaagcgcg gttaacgact gaccccgtca gcgggcggcg tgcgcggtgt tccggtttga
    21721 ctccgtgacc gtttacaccg cgcacccacc gcccgatttt tttcaggagt gaaccccatg
    21781 agtatggttg ccagaaccaa ccccggaccc gcagaggacg acatcaccga taccgatgat
    21841 ggtgataccc gtatttcagc gggtgcattc tggccggata ttgtgctgcg tgagctgcgt
    21901 ctggcgatac gactgccggg ccgtgtgacc acctcccgcc tgctgcatac cgccaccggg
    21961 gccgtggcac acgttacccg cgagctggaa gcgtggcagc aggaacagca ggcggctggc
    22021 catcagacgc tggccgatgt tccggcaccc gtaattaacg gagaaagcgt caatctctgg
    22081 cactggcgca atgccgttta taccgccaca cgcgccctga ttctggagcg ttaccgcgat
    22141 gcggacacaa cggataaggg cgaccgccgc gcggacgcac tggatataca gacatcggat
    22201 ttgtggcgcg atgtaagctg ggccatctct gacattctgc gccgcccgcg aatctttgcg
    22261 gagttgtgct gatgaaagtg aaggcactgg aaagcgacac cgtggattcg ctctgtttcc
    22321 ggtactacgg cacgacgcag ggcgtcaccg aaaaagtgct ggatgcaaac cccggactct
    22381 gtcagcaggt atttctggac gccgggcagg aagtggagat gccggagccg gagaagaaga
    22441 aacgagaaat gattcagttg tggggggagt agcagtgagc accattcaaa cagggatcac
    22501 agagcaggtt attgcatggc tctttgacca cctgccaacg gtgtatgcag taggcgcggc
    22561 ggtcagcatt tccgcgctga tgagtcttta tgacggacga acactggttc agaccgtaac
    22621 gggatcgctg gcgtgcggcg ttcttgccat ggccgtggcc gggtcgttgc gcttcttcgg
    22681 ttttcctgaa gatgccgtga cgtttatcgg cgcatcaatc ggttttatgg gggcagagaa
    22741 agcacgcgac aaggttattg cggcctttaa tcgcagggtg aaggagaagg acgaatgagc
    22801 aacacattta aattcagcag ccggagcgaa aagaatttgc agggtgtaaa tcctgatctg
    22861 gtgaaagtga ccagacgggc actggaaatt tcggaagtgg attttggtat caccgaaggg
    22921 ttgcgcagcc gttaccgcca gaagcaactt gtggccacag gtaagagcca gaccatgaac
    22981 agccgccacc ttacgggaca tgccgtggat gttgtggctt atatcggcag ccaggtgtca
    23041 tgggaatggc cgctgtacga aaaaatcgca gcagcattca gacaggccag ccgggaactg
    23101 aatattccgg tggaatgggg cggcgactgg aagaccctga aagacggacc gcattttcag
    23161 ttaccgcacg gagtttatcc ggcatgaagc tctggcccac gctgggcgtc gcttttcttc
    23221 tgattgccgc ctggggagca tccatgcgtc tgtcgtggtc actgggccgg gagaacgcca
    23281 gaaacgaagc gcaggccagc accctgaaaa gtaccgtcga caccctgaat atcatcagcg
    23341 ccggggtaca ggatatgcag caggtgctgg cacaactccg cgcggaaaat cagcaacgca
    23401 atcaggacgg agaggccaga cgtgaacagc tacgcaacga tattgcaaaa gatgaatgcg
    23461 cccacgcttt gcctgacgct cgttttactg acaggttgcg caggcacgca gaacgcgcca
    23521 ctgccagcgc cgtcagtccg gcttataccg cagacgctga ccataccggt aacgcctccc
    23581 cccttccctg acactcccac atggggaaat ctcggtatat ggggcgaccg ccttctggat
    23641 gcactggaaa cctgtaacgc ggataaacgg gccattgaat tactggaaca gcgcaggctg
    23701 caacgactga acaacgagga caacaaccat gctgaaaact gattccctgc gtgaagccat
    23761 gacccgttca tgccgatggt gtcaggctaa cccggaaaaa ttcaccattt tcgtggagag
    23821 cggcaacatt gaaacgaccg gagaaactcc ctcgtttgtt taccgctatc agatggtgat
    23881 gtttgtcatg gattacgccg gagagctgga cgacctcacg ctgccgctgc tggcgtggtt
    23941 atccgaaaat cagccacagt tgttgctcaa tccggagcgt aatcaggaca tcaaattttc
    24001 cgccgttatc aatgacgatg acagcgccga tctcctgttt acgctccccc tgcgggaacg
    24061 cgttcgcatt acgcgcaaca gtcaggggac accgcaggca gaacacctgc cggagccaaa
    24121 accccgcctg ccctcttccg aaggcgactg gtcgcatgta ttccaggatg tgacgtgggg
    24181 tgaaagcgat ggataaggca ttcacccgcg tggatgaaac ctttgaggcc atccgcgaca
    24241 gcctgaatca gcaggccatc aataacatcg ccagaaagct ggcacaggat ttacgccgcg
    24301 cccagcaggc gcgtatccgg tcacagaaag cgccggacgg gaccgcgtgg acaccacgca
    24361 gacgccgcgt aacccggata caggaacgca ttcgctttat ctggaataac gaagcacgca
    24421 cgctgaaaaa ctggcatcac gacacgggga aatacgggcg aaccattacc gggtgggatg
    24481 aggataaaaa caatatccgc acgttttacc gggatgacat cgaccgcttt ctggaaatac
    24541 gcacccggcg catcaaccag gacagcacaa agcgcgtccc catgtttgta aaactgcgca
    24601 ccgcccgcta cctgaaagcc cgtgcagatg cttccggtgt gacggtgggt tacagcggcg
    24661 tggccgcacg tattgcacgc attcatcagt tcggtgagcg cgatcaggtt gcgccgggca
    24721 ttttcaccga ttacccggta cgtgagctgt tgggcatcag ccaggcagat gagcgcctga
    24781 tttataacac ggtgctgggc cggattgcgg aggctgtacg gtgagcgcag aactcatgcg
    24841 actgctgagc aatatcatcc gtaccgggat catctctgaa gttgatgagg aatcctggtg
    24901 cgtgcgcgtt cgcagcggcg aactggaaac aggctggctg cgctggaaca ccacgcgcgc
    24961 gggagccttc aatgtgtggc tgccgccatc accaggcgaa caggtggtaa ttgcctgcat
    25021 tggcggcaac ccggaaaccg ccatgataat tggcagcctg tggagtgatg ccagtccggc
    25081 ccccggcaaa agcctgaaag aaatcgtgat cagcgcgccg gatggcgcgg tgttccgcta
    25141 cgacgcggac gcaggcgcac tgagcgccag cggcatgaaa acggccactt tacaggcatc
    25201 tgtcagcgtg acactggaca cgcccgtcgt ggaatgcaca aaccttctga gaacagcgac
    25261 gcttgacgtc acaaaaggag gaaagatgag cggcaatatc acgcacagcg gcggcgattt
    25321 cacctcaaac ggcatcacag tgcatacgca taaacacggt ggcgtgaaag gtggcagcga
    25381 ttcgacagga ggcccgcagt gacaacccgc tacacaggaa tgaacccgga cggaacggga
    25441 aacctgaatg atatggagca cctgaaacag tcagtcaggg acatcctgac caccccgctg
    25501 gccagccggg ttatgcgacg ggaatatggc agccttgtgc ctgatttgat tgacgaaccc
    25561 atgaataaca ccacgcgtct gcaatgcatg agtgctgccg tgattgcgct gacacgatgg
    25621 gaaccccgca ttgccctgga tgccatcgac gttgtctgga aagcgggagg ccgcgcaggg
    25681 gtgacgctgt cgggcactgt catgcagacc atgcagaatg ttgaattaac catcacgctg
    25741 agggagtaaa tcatgcccgc tgttgacctt tcccagttac cggaacccgc catcatcgcg
    25801 gagcctgact ttgaagcaat tctggctgac acaaaggcca tgatgattgc gtcctatccc
    25861 gccgaacagc gtgaagccgt ttccgccgcg ctggagctgg aatcggaacc ccttaacgtt
    25921 atcgctcaaa ccatgtcgtt tcgtgaaatg ctgttacgcc agcgggttaa cgagggcgca
    25981 cgcgcctgca tgttaagcca cagcgccggg acagacctgg acaacctcgc gggcaatatg
    26041 aacacaaagc gcctggttat cactccggca acggatacca ccgacgcggt gatggagagc
    26101 gacacctcgc tgagactgcg ggcgcagcgg gcgtatgacg gcctgagtgt tgcaggcccg
    26161 tcaggcgcat acgagtattt tgcacgcagc gccagcggtc tggtgcgtga tgcgcgggcc
    26221 atcagcccgt ctccggcctg tgtgacggtt tccattctgt ccactgaagg cgacggcaca
    26281 gcaacggagg cgttgcttaa taccgttcgc gccgttctga atgcagagga tacccgcccg
    26341 gtggccgacc gcctgacggt acagagcgcc agcatcgtga catggcggct gaatgcaaaa
    26401 ctgtactttt accccggccc ggaatccgaa cctattctgg ccgcggcaga atcgtcattc
    26461 aggaagtggc tggctgaaca ggggcttatc ggtcaggacg tggcgttgtc cgccattgct
    26521 gccgcactgc atgtgcacgg tgtgcaacgc gtggagataa tcgaacccac acagaatatg
    26581 gccatcagcg acatacaggc agcgcgctgt gagtcattca ccatcagcga aggtgggcgc
    26641 aatgagtaat tcgctgttac caccatcagc cagcaatttc atgcgttgcg ccgaagctgt
    26701 cggagcgcgc attacaaaca tcccggtaga cctcaacaca ctgtggtcac cagatacctg
    26761 cccggtgcat ctgctgcctt atctcgcctg ggcattttcc gttgaccgct gggatcgcaa
    26821 ctggccggaa gatacaaagc gacaggttat tcgtgatgca tggctgatac accgacacaa
    26881 agggaccatc agcgcactgc gccgggccat tgagccgctg ggatacctca ttcgcgtgtc
    26941 tgagtggtgg gagttcggcg gagaaccggg aacatttacc gttgaagtcg gcacgctgga
    27001 cagtggcgtg acggaggaaa tgtatctgga aatggagcgg ttgattgctg atgcccgccc
    27061 ggtcagccgc cacatgacag ggctgaatat cattcaggag atccctggag atattttcgc
    27121 ggcggcagca acttacgacg gtgaagtcat taccatttat ccggacgatt aagcatgagt
    27181 accacaacac gaaaatttaa aaccgttatc accgatacgg gtgcaaaaaa attagcgcag
    27241 gcagccgcgc cagatggtaa gcctgtccgc ctgactcata tggccgtggg cgacggtggc
    27301 ggtacattgc ccacacctga cagtaagcag acccgtctgg tgcatgaggt gtggcgacat
    27361 actgttaatc gcgtcatcct ggacgcaaca catcagaacc gcattattgc agagctggtt
    27421 attcctcctg aaacgggcgg attctggatc cgggaaattg gtgtatttga tgagcacggc
    27481 gatttaatcg cggtgggcaa tactgccgaa agttacaagc cagccgttgc cgaagggtcc
    27541 ggtcgtgcac aaacatttcg caccattctg accgtatcca gcacagccac cgtggcgctt
    27601 accgtggata acaccatggt gatggccaca gtggattacg tggatgacaa actgaaagag
    27661 catgaacagt cacgacgtca cccggacgcc tcgctgaccg caaaaggctt tgttcaactc
    27721 agtagcgcca ctaacagcgt gtctgaaacg caggctgcaa cgccgaaagc agtaaaggcc
    27781 gcgtatgacc ttgctaacgg taaatatact gcgcaggatg ccagcacgac gcgaaaaggc
    27841 cttgtccagc tcagtagcgc caccaacagc acgtctgaaa cgcaggctgc aacgccgaaa
    27901 gcagtaaagg ccgcgtatga ccttgctaac gcaaaatata ccgctcagga cgccacgacg
    27961 gcacaaaaag ggatagtcca gctcagtagt gccaccaaca gcacgtctga aacactggcc
    28021 gcgacatcga aagcggttaa ggcggtaatg gatgaaacga acaagaaagc gcccttaaac
    28081 agtcctgcgc tgaccggaac gccaacaacg ccaactgcgc gacagggaac gaataatacc
    28141 caaatcgcaa gcacggcttt cgttatggct gcgattgccg cccttgtaga ttcgtcacct
    28201 gacgcactga atacgctgaa cgagttagcg gcggcgctgg gaaacgaccc gaattttgcg
    28261 accaccatga ctaacgcgct tgcgggtaag caaccgaaag atgccaccct gacggcgctg
    28321 gccgggcttg ctactgcggc agacaggttt ccgtatttta cggggaatga tgtcgccagc
    28381 ctggcaaccc tgacaaaagt cgggcgggat attcttgcga aatcgaccgt tgctgccgtt
    28441 atcgaatacc tcggtttacg agaactcggc acaagcgggg agaaaatacc gttactcagt
    28501 acagcgaata cctggaccaa tcgacaaaca ctcagcggtg gcctttctgg ggaactgtcc
    28561 ggcaatgccg ctactgcaac aaagctgaaa acagcacgaa aaattgctgg agttggtttt
    28621 gatggttcta gcgatatttc aattagtgcc aaaaatgtca atgcatttgc actccgacaa
    28681 acaggtaata ctgttaatgg tgatacatcc gttggatgga attgggatag tggtgcatat
    28741 aacgccctga ttggtggtgc atctgcatta attcttcact ttaatataaa tgctggtagc
    28801 tgtcctgccg tacaattccg tgtgaattat aaaaatggtg gcatttccta caggtcggct
    28861 cgtgatggtt atgggtttga attaggttgg tcagatttct ataccacgac acgaaaacct
    28921 tcagcgggag atgttggtgc atatacgcag gcagaatgta actcaaggtt tattacaggt
    28981 attcgccttg gcggtctgtc atctgttcag acatggaatg gtcccggctg gtctgacagg
    29041 tcaggttatg tcgttacggg ttcagttaac ggaaaccgtg atgaattaat tgatacaaca
    29101 caggcaaggc caattcagta ttgcattaat gggacgtggt ataacgcggg gagtatttaa
    29161 cgatgatgca cttaaaaaac attattgctg gcaaccctaa aacaaaagag caataccagc
    29221 taacaaagca atttaacatc aaatggcttt attcagatga tggaaaaaac tggtatgagg
    29281 aacaaaagaa tttccagcca gacactttga aaatggtcta tgaccataac ggcgttatta
    29341 tttgtattga aaaggatgtt tcagcaatta atccggaagg cgcaagcgtc gttgaattac
    29401 ctgatattac agcaaatcgc cgggctgata tttcggggaa atggatgttc aaagatggcg
    29461 tggtgataaa gcgaacttat accgaggaag agcagagaca acaagcggaa aatgaaaagc
    29521 aaagcctgtt gcaacttgtc agggataaaa cccagctatg ggactcacag ctacggctgg
    29581 gcatcatttc cgacgagaat aagcagaaat taaccgagtg gatgctcttt gcgcagaaag
    29641 tcgaatctac agacacctcc agcctgccag taacgtttcc cgaacaacca gaatgagaga
    29701 aggcccgata tcgggcctta atttttactc tggtttttgt ggccattctg gctttgccgt
    29761 atccacgcgg ctgaccagaa cgctgtagcg ttcccaggct tccagtcgtg tacgttcctc
    29821 atctgttgcc atattcagcc tgacagcacg ttccagaaac tggatgactg attcagcttc
    29881 tgaaagtaac gcggcctttt gtgattcggc ctgttgttgc tgttcgtctg ctgtataaat
    29941 ccgcttaacc acagttccgt ccttaaacac ccacttccct gaatcatcgg cacgacgatt
    30001 ggctgttata tcgggaatct caacgacgct aaagccttcg ggattaagtg ttgaggcatc
    30061 tttggttatg gcaacaataa tattattttc gtcgtataca atctttatgg tgtcgtcctg
    30121 aaagttattt acttcctcat accagttttt accgtcttcg gaccataacc agataacatc
    30181 aaaatttttt gttagctgat attgttcttt tgtttttgga tttccggact taatattttt
    30241 taaatgctgc ataatttaca cctgtgcgac gttataccat gtgccattga tgtatttttg
    30301 tattggtctg aagatggctt catcatcgcc atctacttca ccaatgattc ttaatccggt
    30361 aattgcgtgt ccggcttttt cataacgacc accacgcgcc atcaattgaa caacacgcgt
    30421 acccaggcga acatctttta catagcgtga atcaaaattc ccccagttgc tgggctgtat
    30481 ctgaccgtta acagaaaata ttaccgagtt atctgtattt cgctggctat agaaatgcca
    30541 tcctgcctca tcgcctaact ctgcaactac tggacgggtt gaagcacccc ataaattaaa
    30601 cgttgcattc tttgtggagt tgttggagct ggatagcgtg aattttttac catccccggc
    30661 ctgaatattt ttaaaagcaa tagccactcc attctgaaag cggaatacac gctgactatt
    30721 agcataaaca tccagaatac cgtctccatt ctgtttaaat ccggtgtcat tatcaccaag
    30781 aacaatagag ctaccaccta acgcattcgt cgaaccaact ccaagactgc cattaatgac
    30841 agcattaaca agaatattta gtgcatccca tttcagcgtc atcaggtctt ttgttgtggt
    30901 gctctggcgg cttctccatt tgaaatattc attgccgttg tcgcctgttt caaaccacat
    30961 gtatgaatca gtgtcaccat cggcatcatt tttaaatcca atcttcgccc agtcagtatt
    31021 tcgaatccag gcaaggattg agtcattttc aaaagtaagc ccaccggaca aggtatcgcc
    31081 atttttttgc acggcgttac cagccctgtt taccgtttc
//
LOCUS       DAPGWB010000041        30212 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.041, whole genome shotgun sequence.
ACCESSION   DAPGWB010000041 DAPGWB010000000
VERSION     DAPGWB010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 30212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30212
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.041"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            138..1721
                     /locus_tag="RHX79_001816"
     CDS             138..1721
                     /locus_tag="RHX79_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310895.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDV2197002.1"
                     /translation="MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRD
                     RARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKAT
                     MELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAA
                     VVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAI
                     GFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVD
                     HGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEDEIRQLLERNQHT
                     RLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFR
                     NARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANG
                     HMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHR
                     VQKVQIIPLHKDGELEYEV"
     gene            complement(1995..3848)
                     /gene="asmA"
                     /locus_tag="RHX79_001817"
     CDS             complement(1995..3848)
                     /gene="asmA"
                     /locus_tag="RHX79_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane assembly protein AsmA"
                     /protein_id="HDV2197003.1"
                     /translation="MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSG
                     YQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVK
                     QVMLKGAVIQLTPQTEAVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
                     HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTA
                     AIEQINWQLQGADLPKQGIQGQGSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTL
                     TEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQ
                     GLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLD
                     ATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQG
                     QAHVKMTDTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVT
                     LNDMQGQSPVLALTGEGMLNLADQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVY
                     GNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM"
     gene            complement(3870..4451)
                     /gene="dcd"
                     /locus_tag="RHX79_001818"
     CDS             complement(3870..4451)
                     /gene="dcd"
                     /locus_tag="RHX79_001818"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004942378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDV2197004.1"
                     /translation="MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTF
                     RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPAD
                     LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSF
                     EPLSGPAARPYNRREDAKYRNQQGAVASRIDKD"
     gene            complement(4543..5184)
                     /gene="udk"
                     /locus_tag="RHX79_001819"
     CDS             complement(4543..5184)
                     /gene="udk"
                     /locus_tag="RHX79_001819"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HDV2197005.1"
                     /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI
                     PEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTR
                     MKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS
                     MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE"
     gene            5502..8819
                     /locus_tag="RHX79_001820"
     CDS             5502..8819
                     /locus_tag="RHX79_001820"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDV2197006.1"
                     /translation="MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLA
                     PLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAV
                     VGAVLLRKLLPWYNPLQNLADWLRLAFGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWV
                     LSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTF
                     IIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLI
                     LLPANIMTMVMYAFRAERKHISESETRFRNAMEYSAIGMALVGTEGQWLQTNKALCQF
                     LGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL
                     AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN
                     IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT
                     VKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE
                     AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS
                     RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA
                     SHDALTHLANRASFEKQLRMLLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALL
                     RELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGR
                     VHRVGASAGITLIDDNNHQAAEVMSEADIACYASKNGGRGRVTVYEPQQAAAHSERAA
                     MSLDEQWRMIKENQLMMMAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQKFRRSFS
                     DPALSHALDRRVFHEFFQLAAKAVASKGISIALPLSVAGLSSATLVNDLLEQLENSPL
                     PPRLLHLIIPADAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDG
                     ELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGDVIA
                     DAQPLDLLVNSSYFAIN"
     gene            complement(8858..9715)
                     /gene="alkA"
                     /locus_tag="RHX79_001821"
     CDS             complement(8858..9715)
                     /gene="alkA"
                     /locus_tag="RHX79_001821"
                     /EC_number="3.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2"
                     /protein_id="HDV2197007.1"
                     /translation="MYTLNWQPPYDWSWMLGFLAARAVSGVETVADSYYARSLAVGEY
                     RGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAAR
                     PGLRLPGCIDAFEQGVRAILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPTPQR
                     LAAADPQALKALGMPLKRAEALIHLANAALEGSLPMTIPGDVEQAMKTLQTFPGIGRW
                     TANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEG
                     WQPDGTDEL"
     gene            9849..11201
                     /gene="yegD"
                     /locus_tag="RHX79_001822"
     CDS             9849..11201
                     /gene="yegD"
                     /locus_tag="RHX79_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDV2197008.1"
                     /translation="MFIGFDYGTANCSVAVMRDGKPQLLKMENDSTLLPSMLCAPTRE
                     SVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEE
                     VWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINF
                     QGLGGDEANAQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGG
                     GTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEK
                     GIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLS
                     YRLVRSAEECKIALSSVAETRASLPFISDELATLISQQGLESALSQPLARILEQVQLA
                     LDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR
                     "
     gene            complement(11213..13153)
                     /gene="yegI"
                     /locus_tag="RHX79_001823"
     CDS             complement(11213..13153)
                     /gene="yegI"
                     /locus_tag="RHX79_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310906.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YegI"
                     /protein_id="HDV2197009.1"
                     /translation="MKPTLYTATGECVTPGRELGKGGEGAVYDINEFVDSVAKIYHTP
                     PPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYS
                     PAHRRQRYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDS
                     DSFQINANGTLHLCEVGVSHFTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFGGR
                     HPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQ
                     AFTESGVATGRPTAKAWVAALDSLRQQLKKCPVSAMHVYPAHLTDCPWCALDNQGVIY
                     FIDLGEEVITTGGDFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYI
                     ILIEIALSALSLLLCGLQAEPRYIILVPVLAAIWIIGSLTSKAYKAEIQQRREAFNRA
                     KMDYEHLVSQIQQLGGLEGFIAKRAMLEKMKDEILGLPEEEKRALAALHDTARERQKQ
                     KFLEGFFIDVASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWK
                     ASCERRFVFRPNEAITPADRQAVMAKMTAKRHRLESTLTVGATELQRFRLHAPARTMP
                     LMEPLRQAAEKLAQAQADLSRC"
     gene            complement(13150..13911)
                     /gene="pphC"
                     /locus_tag="RHX79_001824"
     CDS             complement(13150..13911)
                     /gene="pphC"
                     /locus_tag="RHX79_001824"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase PphC"
                     /protein_id="HDV2197010.1"
                     /translation="MSWRLVYASAVGTSHISADLPCQDACQMQVAWLNDQQPLLVMFL
                     ADGAGSVSQGGEGAMLAVNEAMAYMSQKVQGGELGLNDILATDIVLTIRQRLFAEAEA
                     KELAVRDFACTFLGLISSANGTLIMQIGDGGVVVDFGHGLQLPLTPMVGEYANMTHFI
                     TDEDAVSRLETFTSTERVHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASATQE
                     QLDLLPELLKQFLSSPAVNERTDDDKTLALALWLP"
     gene            complement(13908..14567)
                     /locus_tag="RHX79_001825"
     CDS             complement(13908..14567)
                     /locus_tag="RHX79_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HDV2197011.1"
                     /translation="MSEQITFATSDFASNPEPRCPCILLLDVSGSMSGRPINELNAGL
                     VTFRDELLADPLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITK
                     ALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIG
                     VQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTS
                     V"
     gene            complement(14788..14847)
                     /gene="ibsA"
                     /locus_tag="RHX79_001826"
     CDS             complement(14788..14847)
                     /gene="ibsA"
                     /locus_tag="RHX79_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsA"
                     /protein_id="HDV2197012.1"
                     /translation="MMKHVIILVILLVISFQAY"
     gene            complement(15120..15176)
                     /locus_tag="RHX79_001827"
     CDS             complement(15120..15176)
                     /locus_tag="RHX79_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HDV2197013.1"
                     /translation="MMKLLIIVVLLVISFPAY"
     gene            complement(15448..15504)
                     /locus_tag="RHX79_001828"
     CDS             complement(15448..15504)
                     /locus_tag="RHX79_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HDV2197014.1"
                     /translation="MMKLLIIVVLLVISYPAY"
     gene            15783..17030
                     /gene="mdtA"
                     /locus_tag="RHX79_001829"
     CDS             15783..17030
                     /gene="mdtA"
                     /locus_tag="RHX79_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416578.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter subunit MdtA"
                     /protein_id="HDV2197015.1"
                     /translation="MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQ
                     QSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALH
                     FQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLV
                     SRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQIS
                     SGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTL
                     LSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNE
                     GHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVE
                     AQSATTPEEKATSREYAKKGARS"
     gene            17030..20152
                     /gene="mdtB"
                     /locus_tag="RHX79_001830"
     CDS             17030..20152
                     /gene="mdtB"
                     /locus_tag="RHX79_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtB"
                     /protein_id="HDV2197016.1"
                     /translation="MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVS
                     ALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITL
                     QFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPM
                     TQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAIT
                     GANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAE
                     NSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTT
                     NIRASVNDTQFELMMAIALVVMIIYLFLRNIPATIIPGFAVPLSLIGTFAVMVFLDFS
                     INNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFS
                     LIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQN
                     RFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQD
                     NGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQ
                     INLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQAT
                     SLDALSTWVPELMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNA
                     LYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVPLSSIAKI
                     EQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTDKTLNLPVDITTQFQGST
                     LAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALMIAGS
                     ELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMTT
                     LAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTK
                     SRFARHEEEA"
     gene            20153..23230
                     /gene="mdtC"
                     /locus_tag="RHX79_001831"
     CDS             20153..23230
                     /gene="mdtC"
                     /locus_tag="RHX79_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtC"
                     /protein_id="HDV2197017.1"
                     /translation="MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPV
                     IMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDIN
                     GAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFAST
                     QLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQG
                     ALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTN
                     AKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEV
                     EQTLIISVALVILVVFLFLRSGRATIIPAVVVPVSLIGTFAAMYLCGFSLNNLSLMAL
                     TIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLL
                     LMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRML
                     VALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQA
                     DQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQ
                     QIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRK
                     KLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIY
                     QPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGL
                     SAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILI
                     IAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLI
                     GIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSG
                     GDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE"
     gene            23231..24646
                     /locus_tag="RHX79_001832"
     CDS             23231..24646
                     /locus_tag="RHX79_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2197018.1"
                     /translation="MTDLPDSTRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESP
                     LHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELL
                     LARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY
                     ASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSK
                     GTGLSPLTIDGLVAVGVVALVLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIG
                     SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATT
                     LGLSLVTLLFMTTALLGWYYVLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNS
                     LLSMIMQLSMSIGVTIAGLLLGLFGSQHVSVDSGTTQTVFMYTWLSMAFIIALPAFIF
                     ARVPNDTHQNVAISRRKRSAQ"
     gene            24643..26046
                     /gene="baeS"
                     /locus_tag="RHX79_001833"
     CDS             24643..26046
                     /gene="baeS"
                     /locus_tag="RHX79_001833"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     BaeS"
                     /protein_id="HDV2197019.1"
                     /translation="MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIK
                     HGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHG
                     WRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD
                     KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSED
                     ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPE
                     TVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRG
                     LKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFAD
                     SAPGVSDEQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
                     VSITVELPLERDLQREV"
     gene            26043..26765
                     /gene="baeR"
                     /locus_tag="RHX79_001834"
     CDS             26043..26765
                     /gene="baeR"
                     /locus_tag="RHX79_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BaeR"
                     /protein_id="HDV2197020.1"
                     /translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGD
                     QVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEI
                     GADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLD
                     LTPAEFRLLKTLSHEPGKVFSREHLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE
                     QSFIRAVYGVGYRWEADACRIV"
     gene            26956..27288
                     /locus_tag="RHX79_001835"
     CDS             26956..27288
                     /locus_tag="RHX79_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310915.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HDV2197021.1"
                     /translation="MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIA
                     SVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGT
                     SQTVKDNT"
     gene            27497..27793
                     /locus_tag="RHX79_001836"
     CDS             27497..27793
                     /locus_tag="RHX79_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001307279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDV2197022.1"
                     /translation="MTYTDVRFLLTGGRKMARTMTVDLGDELREFIESLIESGDYRTQ
                     SEVIRESLRLLREKQAESRLQALRDMLAEGLSSGEAQPWEKDAFLRKVKAGIRK"
     gene            27795..28091
                     /locus_tag="RHX79_001837"
     CDS             27795..28091
                     /locus_tag="RHX79_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001220181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDV2197023.1"
                     /translation="MRIIKLMPKANEDLEGIWYYSYHHFGEPQADRYVEHLSDVLQIL
                     SNNNIGTPRPELGEGIFVLPFERHVIYFLQSPGEIIVIRILNQNQDATRHLHWS"
     gene            28194..29555
                     /gene="yegQ"
                     /locus_tag="RHX79_001838"
     CDS             28194..29555
                     /gene="yegQ"
                     /locus_tag="RHX79_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HDV2197024.1"
                     /translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFN
                     HENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIM
                     LVREHFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDME
                     IEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKY
                     EPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVE
                     RLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGY
                     TEGFLRRHTHDDYQNYEYGYSVSDRQQFVGEFTGERKGDLAAVTVKNKFSVGDSLELM
                     TPQGNINFTLEHMENAKGEAMPIAPGDGYTVWLPVPQDLELNYALLMRNFSGETTRNP
                     HGK"
     gene            complement(29885..30202)
                     /locus_tag="RHX79_001839"
     CDS             complement(29885..30202)
                     /locus_tag="RHX79_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310918.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197025.1"
                     /translation="MKKIAAISLISIFIVSGCAVHNDETSIGKFGLAYKSNIQRKLDN
                     QYYTEAEASLARGRISGAENIVKNDAAHFCVTQGKKMQIVDLKTEGAGLHGVARLTFK
                     CGE"
BASE COUNT         6971 a         8054 c         7993 g         7194 t
ORIGIN      
        1 ttaattcagg gataatgtga ggttattacc ctcaaataat atgagataaa tagtgctgca
       61 acattgcatt tttgccccga tttatccatg atcgaattgt gacatttgtc atacaacgaa
      121 taggttttgt acttactatg gaatggattg ccgatccgtc tatctgggcc gggttaatca
      181 cgctgattgt gatcgaactg gtcctcggca ttgataacct ggtctttatt gccatcctcg
      241 ccgaaaaact accgccgaag cagcgcgacc gcgcacgggt taccgggctg ctgctggcga
      301 tgttaatgcg cctgttactg ctggcgtcaa tctcctggct ggtcaccctg actcaaccgc
      361 tgttcagctt ccgctcgttt acctttagcg cccgcgactt aatcatgctg tttggtggtt
      421 tcttcctgtt gttcaaagcc acgatggagc tgaacgaacg gctggaaggg aaagacagca
      481 ataatcccac acaacgcaaa ggtgcgaagt tctggggggt ggtgacacaa attgtggtac
      541 tggacgccat cttctcactc gactcggtga ttaccgccgt cgggatggtc gaccatttac
      601 tggtcatgat ggccgccgtg gttatcgcta tcagcctgat gttgatggca agcaagccgt
      661 taacccagtt cgttaatagc cacccgacca tcgttattct ctgcttaagc ttcctgctga
      721 tgattggctt tagcctggtg gcagaaggtt tcggcttcgt cattccgaaa ggctacctgt
      781 acgctgccat tggtttctcg gtgatgatcg aggcgctcaa tcagttggct atctttaacc
      841 ggcgacgttt tctttccgct aaccagacgc tgcgccagcg gactaccgaa gcggtaatgc
      901 gcctgcttag cgggcaaaaa gaagatgcgg aactggacgc cgaaaccgcg tccatgctgg
      961 tggatcatgg taaccagcag atctttaatc cgcaggaacg gcggatgatt gagcgggtac
     1021 ttaatcttaa ccagcgtact gtcagcagca ttatgacgtc gcgccacgat attgagcata
     1081 tcgatctcaa cgcgccggaa gacgagatcc gccagttgct ggagcgaaat cagcatacgc
     1141 ggctggtggt taccgacggt gatgacgcag aagatttgct cggtgttgtt cacgttatcg
     1201 acctgctaca acagtcactg cgtggcgaac cgctcaacct gcgggtgttg attcgccagc
     1261 cgctggtgtt cccggaaacc ttgccgttgt tacctgccct ggagcagttc cgtaatgccc
     1321 gcacgcactt tgcttttgtg gtggatgagt ttggctcggt ggaagggatt gtgacattaa
     1381 gtgacgtcac tgaaaccatt gccggtaact taccgaacga agtggaagag atcgacgccc
     1441 gccatgatat tcagaagaat gcggacggtt cctggacggc gaatggtcat atgccgctgg
     1501 aagatctggt gcaatatgtg ccgctgccgc tggatgaaaa acgtgaatat cacaccattg
     1561 ccgggctgtt gatggaatat ttacagcgta ttccaaaacc tggcgaagaa gttcaggtgg
     1621 gggattattt gcttaaaacg ttgcaggtgg aaagccatcg cgtgcagaag gtgcagatta
     1681 ttccgctgca taaggatggc gagttggagt acgaggtgtg atggtatcgg tcattttacc
     1741 cgacagccga aaggaataag atgagggaac cgcgccagcg gcgatttacc gccgggagcc
     1801 cgggttgcca gggtggtggc gattgagcca ccctggcacg ttcaccggct tgagcgttcc
     1861 atagtagtga ggaacatcaa gtgaacggaa cagccttcga tcttacatat tcagaatata
     1921 atggtgccgc cgcgaacgcc tgatgcgacg ctttacgcgt cttatcaggc ctacaggaca
     1981 ggtcacctgg taacctacat cttctccagc aacttcttca catctttgcc attgcgggaa
     2041 tctttattcc gctcggccca gtcattcagg cgacgtttcg cttcgtcctg tagatgtttg
     2101 cgcagtaact gatccacttg cagactgtaa ttgagttgct gccagttgcc ataaacccgc
     2161 agcggtactg gcgtttcttt gaggaaatca atcagtttgc tttccccgtt ccagccaccc
     2221 acgacccgaa tatcaaactg ggtgtcgcag gtttgatctg ccagattcaa catgccttcc
     2281 cctgtcagcg ccagcacagg cgattgacct tgcatgtcgt ttaacgtcac gacgccatcc
     2341 ttcaacgtca aatcggtggt aaagcggtca agccgcgtca cgttatcaaa gttttcagcg
     2401 gccttcacat caccgccatt acgctctacc gcttgctgaa tcatctgctg gaagttcatc
     2461 ccttccatgc gcgtgtcggt cattttgaca tgtgcctgtc cttgccagtt gtggcggaat
     2521 gcgtcggcat ctatgtcagc accggagaaa tcaccagcca gtgacatttt tccggtcaac
     2581 gaaatcggat agttaaacgc cttcagaatg gtaccaatct caacgttttc cagccgtggc
     2641 tggaagttta tccgcggatt tattgatgtc gcgtccagcg tgcccggcag tgaaacctgt
     2701 ccaccgttaa gcttgccctg cagttgagta atttccagca aacccgactt gttggtcatt
     2761 tgcgtggcaa catctgtaaa attcattccg cgccagcgca cgttactggc ctgcaacaaa
     2821 atatcagccg taaagccttg cagtccctga tatgccggtt catcaatacg cgaagaaatg
     2881 accgggcgcg gcaatgttga ttggctctgc ccctgctgcg cggcaccgtt ttcaccattc
     2941 gctgtttcat taagcgggat gaggttgtca agattcagtt gcgggaattg cagtctcagc
     3001 tgccattcag gtttctctgt cagcgtgacc tgtgcttgcc cgctcagcgt gctgtcattg
     3061 gcggtcaagc tgatttggtt aaatgaaagg cgtttatgtg actcctgcca ctgggcctgg
     3121 aaactcccct gcccctgaat accttgtttt ggtaaatctg caccctgcaa ctgccagtta
     3181 atttgttcaa tagccgccgt taaatcatgc ggataatcag aagcatctac cgtaccgtta
     3241 agggatatcg tgagatcgcg ctgatcgcga ttaacccgcc cggagaactc aaatgaacca
     3301 cgatgttggg gatcttgttc catttgcagg cgaatattgc ggattgtcac ctgctcgtca
     3361 tcttcatgct ggaacaccag cacgctgtcc gccaccttaa gactggatat atcaaacgac
     3421 catccgcgat cgtctgacag atccggcaag gtattgtcgc gcggtgcaac cggagcgtct
     3481 tcactgcgca ccgcttccgt ctgcggcgtc agttggatca ctgccccttt tagcatcacc
     3541 tgcttaacgc tcagttgatg actcagtagt ggtaaaagcg ccacgtccag acgcatgttg
     3601 tcggcgcgaa ccagtggctg gcttgcaccc tgggcggtga gagacattcg cccggagagg
     3661 atactaagct gcggccagac gtgccaacgc agtggcccgt cgagctgcaa ttgataaccg
     3721 ctacgtgcag caacttgctt gaccatatag tcgcggaaat cattcggatt caccagcaac
     3781 actaacgcag ataacccggc caccagcacg accaggagta tcatcagcgt cgtcagaaat
     3841 cgtctcatgg tatcctcaat gggcctgaat tagtctttat cgattcggct ggctaccgcg
     3901 ccctgctggt tgcgatattt cgcatcttca cggcggttgt aaggtcgcgc cgccgggccg
     3961 gaaagcggct caaagctcag cgcaccaatt aacatgcccg gacgcagcgc cagcggcagc
     4021 ttaccggagt tgtagaactc cagcacaatg caaccagacc agcccggatc gatacggtgc
     4081 gcggtgacgt gcaccatcag ccccagacgc gccaaagagg aacgcccgtc cagccagccc
     4141 accagatcgg ctggcagcgt caccgactcc agcgtcaccg ccagcgccag ctctcctggg
     4201 tgaagataga acgcctcgcc ctcgtcgaga acgatctcat cgctcatcac gcggtcaagc
     4261 gcggcgctca cttcatcttt gggaccgctc agatcgataa acgctgccgt gtgaccacgg
     4321 aaggtacgaa atttattgcc caggcgtaca tccaccgtcg cgccgttaat acgctccact
     4381 ggcggacgtg ggttgatcga caaacggcct tcatcaagcc aggcttcaat atctcggtca
     4441 cacagacgca tggcattttc tcctttcgcg catcactccc ttaacgccaa ttacgtcaag
     4501 ggcataccag gttatcactg aacggtacac aatttatcaa gcttattcaa agaactgact
     4561 tattttcgct ttcaatatat cgatcgcgat gcggtttttc ccgccgcgcg gcacgataat
     4621 gtccgcatat tgtttagaag gctcaatgaa ttgcaggaac atcgggcgca cggttttttg
     4681 atattgcgcc atcacggaat ccattgaacg cccacgctcg ttaacgtcac gcttgatgcg
     4741 gcgcatcagg cagatatcca gcggggtatc aacgaaaatg gagaagttaa gttcgtcacg
     4801 caaacgcgca tccgtcagca acaaaatgcc ttcgagaatg atgaccttct tcggctcaac
     4861 cgtcaccgtt tctttcatac gcgtatgttc aacatagctg taaaccggca ggtcaattgc
     4921 cgagccgcgt ttcaacgctt gtaaatgctc aagcaacagg ctgtgatcca tcgcgctggg
     4981 atggtcgtag ttggtcttaa cgcgttcttc catcgacaga tggctttgat ctttgtaata
     5041 gcagtcttcg ggaattacgc cgatgtgttc atcaccgact tgctcacgta attcacgata
     5101 aagggtactg gcaataagac tcttgccgga agccgatgcg ccagcgatac cgataatgac
     5161 gcactgatga gactgatcag tcatatattt agcgacctga ttaacctgga tgttaggaag
     5221 ggggcgacga agcgccaaac gcggcaatta tagggatttc atccgcctga taccagtcga
     5281 atagcgttgc cgcgcgctca gagttaattg ttgacgaaga attcccggtg gcaaattacg
     5341 ttgatcagtt ttatacaagg taaaaaatgt tatacgcagt tgcgcaaatt atccgccttt
     5401 acgtcacttt atgagcaatt cgcatataaa atgtaaaact tttgtactag cataaacaca
     5461 gaaacgaata ctggcgacct ggtcttgcgg ataaagcggt aatgagcaaa caatcacagc
     5521 atgtattaat tgccctgccc cacccgctgc ttcacctggt cagtttaggt ttagtctcgt
     5581 ttatctttac ccttttctcg cttgagcttt cgcagtttgg cacccaactc gccccactgt
     5641 ggttcccgac gtccatcatg atggtggcgt tttatcgcca tgccgggcgc atgtggccgg
     5701 gaattgcgct gagctgctcg ctgggaaata tcgccgcatc catcctgctt ttttccacca
     5761 gctcgctgaa catgacctgg acgaccatca atattgttga agccgtggtc ggggcagtgc
     5821 tgctacgtaa attgctgccg tggtataacc ccttgcaaaa tctggctgac tggctgcgtc
     5881 tggcattcgg cagcgccatt gttccgcctc tgctaggggg tgttctggtt gtcctgctga
     5941 cgcccggaga cgatcctctc agggcatttt tgatatgggt actgtcagaa tccatcggcg
     6001 ctctggcact ggtgccgctg ggattgttat ttaaaccaca ctatctgctg cgccatcgca
     6061 acccacggtt gctttttgag tcgctgctca cgttagccat cacactgacg ttaagctggc
     6121 tttcgatgct gtatctgccg tggcctttta ctttcattat tgtgctgttg atgtggagcg
     6181 ccgtgcgcct gccacgaatg gaagcctttt tgatcttcct taccacggtg atgatggtgt
     6241 cgctgatgat ggccgcggat ccctccctgc ttgctacgcc gcgtacatac ctgatgagcc
     6301 atatgccgtg gctaccgttt ttgctgatcc tgctgcccgc caacatcatg acgatggtga
     6361 tgtatgcctt tcgtgcggaa cgcaaacaca tttccgaaag cgaaacccgt tttcggaacg
     6421 ccatggaata ttccgctatc ggtatggcgt tagtgggcac cgagggacaa tggctgcaaa
     6481 ccaacaaagc gctctgccag tttctcgggt acagtcagga agagctgcgc ggactcacct
     6541 ttcagcaact gacctggccg gaggatctca ataaagatct ccaacaggtt gaaaagctga
     6601 taagcggtga aataaacacc tattcaatgg aaaaacgcta ctacaaccgc aatggcgatg
     6661 ttgtctgggc gttgcttgcc gtctcactgg tgcgccacac ggatggcacg ccgctctatt
     6721 ttatcgctca gattgaagac attaacgagc taaaacgcac cgaacaggtg aatcagcaac
     6781 tgatggagcg catcacgctg gctaacgaag cgggcgggat tggcatctgg gagtgggagt
     6841 tgaagccgaa tatttttagc tgggataagc ggatgttcga gctgtatgaa attcctccac
     6901 atatcaaacc gaactggcag gtgtggtacg agtgcgtgct gccggaagat cgccagcatg
     6961 ccgaaaaagt gattcgtgat tcgttgcaat cacgctcgcc ctttaaactg gaatttcgca
     7021 ttaccgtaaa agacggtatt cgccatatcc gcgccctcgc caaccgggta ctgaataaag
     7081 aaggcgaagt cgaacgcctg ctcggcatta atatggatat gactgaggtt aaacagctta
     7141 acgaggcatt gtttcaggaa aaagagcgcc tgcacataac gctggactcc atcggcgaag
     7201 ccgtggtctg tattgatatg gcaatgaaaa ttacctttat gaatccagtg gcggagaaga
     7261 tgagcggctg gacgcaggaa gaagcattag gtgttccgct cctgacggtg ttgcatatta
     7321 cctttggcga caatggtccc ctgatggaga acatttacag tgccgacacc tcacgttccg
     7381 cgattgaaca agatgtggtg ttgcactgcc ggagcggcgg cagctacgac gtgcattaca
     7441 gtattacgcc gttaagtact ctggacggca gcaatattgg ttcggttctg gtgattcagg
     7501 acgttaccga atcacgcaaa atgctgcgcc agctgagcta cagcgcctcc catgatgcac
     7561 tgacgcatct cgccaatcgc gccagttttg agaagcaact gcgtatgctg ctgcaaacgg
     7621 taaacagtac acatcagcga catgccctgg tgtttatcga tcttgatcgc tttaaagcgg
     7681 tgaatgacag cgccgggcat gcggcgggcg acgctttgct gcgcgaactg gcgtcgttga
     7741 tgctgagtat gctgcgttcc agcgacgtgc tggcgcgact cggtggggat gaatttggtc
     7801 tgctgctacc agactgtaat gttgaaagcg cgcgttttat cgctacacgc attatcagtg
     7861 ccgtgaatga ctatcacttt atatgggaag gccgtgtgca tcgggtaggt gccagtgccg
     7921 ggattacctt gattgatgac aacaatcatc aggcggcaga agtgatgtcg gaggctgata
     7981 tcgcctgtta tgcctccaaa aatggtggac ggggccgggt gacggtttac gaaccacagc
     8041 aagctgccgc acatagcgaa cgggcggcga tgtcgcttga tgaacagtgg cggatgatta
     8101 aagagaatca gttgatgatg atggcccacg gtgtcgcttc gccgcggatc ccggaagcgc
     8161 gtaatttgtg gctgatttcg cttaaactct ggagttgcga aggcgagatt attgatgaac
     8221 aaaaatttcg tcgtagcttc agcgatccgg cacttagcca tgctcttgac cgacgggtat
     8281 tccacgaatt tttccagctg gccgcaaaag cggttgccag taaaggcata agcatcgccc
     8341 tccccctttc cgttgccggt ttgagtagcg ccacgctggt gaatgatctg cttgagcagc
     8401 tggaaaatag ccctctacca ccacggttat tacatctgat tattccggca gacgcgattt
     8461 tagatcacgc agaaagcgtg caaaaactgc ggctggcggg atgtcggata gtgctcagcc
     8521 aggtgggccg cgatctgcaa atcttcaact cgctgaaagc gaatatggca gattacctgc
     8581 tacttgatgg tgagttatgc gccaacgtgc agggtaattt gatggatgag atgctgatta
     8641 cgattattca ggggcacgct cagcgactcg ggatgaaaac catcgccggg ccagtcgttt
     8701 tacccttagt gatggatacg ctttctggca tcggcgtcga tctgatttat ggtgatgtga
     8761 ttgccgatgc ccaaccgctg gatttgctgg tgaatagcag ttatttcgcg attaactgag
     8821 ggagcgtttg cccattgcct gatgcgacgc atcaggccta caattcgtcc gttccgtctg
     8881 gttgccagcc ttccgtatac cagatatgca acagcgcata agaacgccag ggcttccagc
     8941 gctcggcata acggcggatt tgtgccggtg tcatccccgg aaatcgctgt ttaatcagat
     9001 aatcatccgg cagaaaaaca tctttcgcct gccagccacg caaagcgaaa taattcgccg
     9061 tccagcgccc gatacccgga aaagtttgca gcgttttcat cgcctgctcc acatcgcccg
     9121 gaattgtcat tggtaagctg ccctccagcg ccgcatttgc cagatgaatc agtgcctctg
     9181 cccgtttcaa cggcatgcct aacgctttta atgcctgcgg gtcggctgct gccagccgct
     9241 gaggcgtggg gaagcagata tactccggaa aatcatccag ccgttcgcca taaagctgta
     9301 caactttggc agtcaatttt gccgccatcg ccacgctcac cagttggcct aaaatcgccc
     9361 gcacaccctg ctcaaaagca tcaatacagc cgggtaaacg caatccgggc cgcgccgcgc
     9421 ctaacttgcc caacgcaccg ttaacaatct gcgggttaca ttgcagatca aacaggcggc
     9481 tcattttcgc cagacactca gcggcaacgg gttctaaacc tgcacttaaa tttatgtgca
     9541 gagtatggcg ggctatatcc ggaatagcag tcaccacgcc gcgatattcg cccaccgcca
     9601 gactacgggc ataataactg tccgcgaccg tttccacacc actcactgca cgggcggcga
     9661 gaaatcccaa catccacgac cagtcatacg gcggctgcca gttcagggta tacatcgcat
     9721 ctccttattc atccgctttc agcataaacg ttattcagac gctacgcttt gctttcatat
     9781 tccggttgtc gcgacagcaa catttcgcta aagtcacgcc ccttcttcac cggcatgggg
     9841 attaattcgt gtttattggt tttgattacg gtacagcaaa ctgttcagtg gcggtcatgc
     9901 gtgacggtaa accgcaatta ctgaaaatgg aaaacgacag cacgctgctg ccttcaatgc
     9961 tttgcgcgcc aacgcgtgaa tcggtaagcg aatggctgta ccgccatcat gatgttccgg
    10021 cagacgacga tgaaacgcag gcgctgttac gtcgggcgat tcgttataac cgcgaagaag
    10081 atatcgatgt tacggcgaaa agcgtgcagt tcggtctttc ctcactggca cagtacattg
    10141 atgatccaga agaagtgtgg tttgtgaaat caccaaaatc gttcctcggt gccagcggct
    10201 taaaaccgca gcaggtagcg ctgtttgagg atctggtctg cgcaatgatg ttgcacattc
    10261 gccagcaggc gcaggcgcag ctgccagaag cgattactca ggcggtgatt ggtcgcccga
    10321 tcaacttcca ggggctgggc ggcgatgaag caaacgccca ggcgcaaggg attctggaac
    10381 gcgcggcgaa gcgtgccgga ttcagggacg tggtattcca gtacgagccg gtcgcggctg
    10441 ggctggatta cgaagccacc ttgcaggaag aaaaacgggt gctggtggtg gatatcggcg
    10501 gtggtacgac tgactgttca ttgctgctga tggggccgca gtggcgttcg cgtctcgatc
    10561 gtgaagccag cctgctgggt cacagtggtt gccgtattgg cggtaacgat ctggacatcg
    10621 cactggcgtt taaaaacctg atgccgttac tgggcatggg tggcgaaacc gaaaaaggca
    10681 tcgccctgcc gattctgccg tggtggaatg cggttgccat caacgacgta cctgcgcaga
    10741 gtgatttcta cagtagtgcc aacggtcgtc tgcttaacga tctggtacgc gatgcccgcg
    10801 aaccggaaaa agtggccctg ctacagaaag tctggcgtca gcgtttaagc tatcgcctgg
    10861 tgcgtagcgc agaagagtgc aaaattgctc tttcaagcgt agcggaaacc cgcgcctcac
    10921 tgccgtttat cagcgatgaa ctggctacgc tgattagcca gcaagggctg gaaagcgccc
    10981 tcagccagcc actggcgcgg attctggaac aggtgcaact ggccctggat aacgcccagg
    11041 aaaaaccgga cgttatctac ctgaccggcg gtagcgcccg ttcgccgctg attaaaaaag
    11101 cgctggcaga acagttgccg ggaattccga ttgcaggcgg cgatgacttt ggctccgtca
    11161 ccgccgggct ggcacgctgg gcggaagtgg tgtttcgtta aaagaaaatg gctcagcagc
    11221 ggcttaaatc tgcctgcgcc tgagccagtt tttctgccgc ctgacgtaaa ggttccatca
    11281 acggcatggt ccgtgctgga gcatgaaggc ggaatcgctg caactctgtc gcgccgacag
    11341 tcaacgtcga ttccagccga tgtcgtttgg cggtcatttt cgccattacc gcttgtctgt
    11401 ctgctggcgt tatcgcttca ttcggcctga acacaaaacg gcgttcacag ctcgctttcc
    11461 agtcgataac cgcctgggtc agatggtcgc caaacccttt cacttgctta acgccacgac
    11521 gggtaacatc tgcggctgtt tcaataccaa aagaccgtaa cgccgcttta cgcgcagggc
    11581 caacgccggg aatagaggca acatcaataa aaaatccctc cagaaacttc tgcttctgcc
    11641 gttcccttgc agtgtcatga agtgctgcca gagcgcgttt ctcttcttcc ggtaacccga
    11701 gaatttcgtc cttcattttt tcgagcatcg cccgtttggc gataaaacct tccagcccgc
    11761 ccaactgttg gatctggctg actaaatgct catagtccat tttcgcgcga ttaaatgcct
    11821 cacggcgttg ctggatttct gctttgtacg ctttgcttgt cagactgcca ataatccaga
    11881 tagccgccag cacaggaacc aaaataatat aacgcggttc tgcctgaagg ccgcaaagca
    11941 acagcgataa cgctgacagt gcgatctcaa tcagaatgat gtattcgcgc cgtaacaggc
    12001 ctaaaggaag cggcctgcca gtcggttgga aatgatcggg taatggcaat tgcaatgctg
    12061 gcggtgctac tgacgccatc accatcgccc agactttcgc cagcacaaaa tcaccgccgg
    12121 tggtaatgac ctcttcgccg agatcaataa aatagataac gccttgatta tccagcgcac
    12181 accacgggca gtcggtcaaa tgagcgggat aaacatgcat tgccgaaacg ggacatttct
    12241 ttaactgttg gcgcagagaa tcaagtgccg ctacccacgc tttagccgtc ggacgcccgg
    12301 ttgccacgcc actttccgtg aatgcctgct gaaacatggc ttcaacatca ctcggtaaca
    12361 tcgatagcgg aatcgatcgt ggcggcggtt ttaaaccacg tcgctgatta tctgacgcgt
    12421 aggcataacg gaaatgggta atatccgtct ccagcgcatt acccgcatca gagataagcg
    12481 gcacaccaga ataaggatgc cggccaccaa acaagacgtg aaaaatcagc aacgcaaggc
    12541 caaaattatc gtgattttct gtgcgttcaa agccgacaaa tgacgacaag gtttgtagct
    12601 ctggcggcgt aaaatgcgac acgccgactt cgcataaatg cagtgtgcca ttggcgttaa
    12661 tctgaaagga gtcgctatca atcagtacca ctttgctgtc gcgacctacc ataaaactgt
    12721 tctggtttac gtcacccacg acgtgcccgt gctcgtgaac cgtagcaaaa gatgaagcaa
    12781 tattgcgcgc aacatagagt agaaaatccc acgcacaatg agggtaacgt tgacgacgat
    12841 gtgccgggct atagatcata tgaatcggtt ctttaccaga aacttttggc atcataaaac
    12901 cgataacttt tccgcctcgt ccaccgtgaa gcgttgcctg cggccaggcg acataattca
    12961 acaattgcgc gtcagctgtc gcagccataa aggcaagttt gtcctgtttt aaggcgggtg
    13021 gcggcgtgtg ataaatcttg gcgacgctat cgacaaactc attgatatca taaaccgcgc
    13081 cttcaccgcc tttgcccagt tcacggcctg gcgtaacgca ctcaccagta gcagtatata
    13141 aagtgggttt catggtaacc acagcgccag tgccaacgtt ttatcatcat ccgtacgctc
    13201 gtttaccgcc gggctggaca aaaactgctt taacaattca ggtaataaat cgagttgttc
    13261 ctgcgttgct gacgccagtc cattgaaaaa cggggtaaag aaaggtacat gaggagaatt
    13321 atccagcata tttaacgcca gtcgctggat accatccgta aatgctgcaa ctttatgcac
    13381 acgctcagtg ctggtgaaag tttccagtct ggaaacggca tcttcatcgg taatgaagtg
    13441 cgtcatattg gcatattcac ccaccatcgg cgtaagcggc aattgcagac cgtgaccaaa
    13501 atccaccacc acgccgccat cgccaatctg cataatcaag gtgccattag ccgatgaaat
    13561 caatcccaga aacgtgcagg caaaatcgcg aactgctaat tctttggcct ctgcctcggc
    13621 aaaaagtcgc tgacgaatag tcagcacaat atccgtggcg aggatatcat taagccccaa
    13681 ttccccaccc tgcacttttt gcgacatata agccatcgct tcattgacgg cgagcatcgc
    13741 gccttcgcca ccctgcgaga cgctgcctgc accatcagca agaaacatca ccagtaatgg
    13801 ttgctgatcg tttaaccagg caacctgcat ctggcaggca tcctgacaag gtaaatcagc
    13861 gctaatgtgc gacgttccaa cagcggatgc ataaaccaga cgccagctca cactgacgtc
    13921 cagccttttg gcgcttccag cacaacttcc gttcccggcg tggagcggga aaccgaacgc
    13981 agcgaactgg ataaccagct aaacagttca cggaattgta atccttgcag aggcaaaggc
    14041 tgacgaacgc tgatttgtgc cagcgtcttc atatccgccc cctgaacacc gatggaaaag
    14101 aaggcaaact tcttatcttc ttccccctga aacactttgt tggcggcagc ctgccactca
    14161 tcggttggag cgccatcggt gatcaggaaa atccacgggc gataatacga aataccattt
    14221 gcgcggtact cacgtttcct ctcttcaacc atatccaggg ctttggtaat ggcggccccc
    14281 attggcgtat ccccctgggc aaacaggatg ggcgggaaaa agttagcggc gctggtaaag
    14341 ggttgttcca catgcaccgg gccgaacgtc acaatgccga gttccactct ttttaaagcc
    14401 agcggatcgg caagcagttc atcacgaaag gtcaccaatc cggcgttaag ttcattaata
    14461 ggtctgccgc tcatcgagcc agaaacatcc agcagcagaa tgcaggggca acgtggttcc
    14521 gggttactgg caaaatcgct ggtggcaaac gtgatttgtt cgctcataag aaatcctttc
    14581 ttagagaatt atcgaggtcc ggtatcatac cgactgcaat aatgaaataa gagcaaacga
    14641 agaaactttc agaattaggc ccggcggcgc agaaaatttt gctattcgcc tcgcaagaac
    14701 ggagagccgt cgattgacac taagggcgga gtgacataat ttcaggagtg agggttaggg
    14761 agaggtttcc ccctccccct ggtgttctta gtaagcctgg aagctaatca ctaagagtat
    14821 caccagtatg atgacgtgct tcatcataac cctttcctta ttaaaagccc tcttctccgg
    14881 gagaggcttt cccgtttcag cgtcccgctg aaatcatcgg cttacctcct ttcgccctga
    14941 atgcagtcta tcgctaacgc gtgaataaaa tagtttcctc tgtgattatt gcgtaacgac
    15001 tcgcaaagaa tatttgctgg caggatcgca gactacaaag cctgcggatt gacaatctta
    15061 tcgtgaaggc atactttcag gagtgagggt agagcggggt ttcccccgcc ctggtagtct
    15121 tagtaagcgg ggaagcttat gactaagagc accacgatga tgagtagctt catcatgacc
    15181 ctttccttat ttaaggcccc ttcctcggga ggggctttcc cgtttcagcg tcccgctgaa
    15241 atcgtcggct tacctccttt cgccatgcac ttagtctatc gctgacttgc agataaaata
    15301 gtttccagtg tgattattgc gtaacgtctc gcaaagaatt tttgctggca ggatcgcaga
    15361 cggcaaagcc tgcggattga caatcttatc gtgaaggcat actttcagga gtgagggtag
    15421 agcggggttt cccccgccct ggtagtctta gtatgctggg tagctaatca ctaagagcac
    15481 cacgatgatg agtagcttca tcatgaccct ttccttattt aaggcccctt cctcgggagg
    15541 ggctttcccg tttcagcatc cggctgaaat ctgcggctta cctcctttcg ccctgtatgt
    15601 agtctatcgc taacgcgtag ataaaatagt ttcctgtgtt attactggat gcgtgctcgc
    15661 aaatgtgccc gccattcaga cgattcccga tagtgtttca taattcctcc atttttctcc
    15721 cttattggct ggctacacta gtatcattcc gcgaaacgtt tcaggaagag aaactcttaa
    15781 cgatgaaagg cagttataaa tcccgttggg taatcgtaat cgtggtggtt atcgccgcca
    15841 tcgccgcatt ctggttctgg caaggccgca atgactccca gagtgcagcc ccaggggcga
    15901 cgaaacaagc gcagcaatcg ccagcgggtg gtcgccgtgg tatgcgttcc ggcccattag
    15961 ccccggttca ggcggcgacc gccgtagaac aggcagttcc gcgttacctc accgggcttg
    16021 gcaccattac cgccgctaat actgttacgg tgcgcagccg cgtggacggt caactgatgg
    16081 cgttacattt ccaggaaggc cagcaggtca aagcaggcga tttactggca gaaattgacc
    16141 ccagccagtt caaagttgca ttagcacaag cccagggcca actggcaaaa gataaagcca
    16201 cgcttgctaa cgcccgccgt gatctggcgc gttatcagca actggcaaaa accaatctcg
    16261 tctcccgtca ggagctggat gcccaacagg cgctggtcag tgaaaccgaa ggcaccatta
    16321 aggctgatga agcaagcgtc gccagcgcgc agctgcaact cgactggagc cgcatcaccg
    16381 caccagtcga tggtcgcgtt ggtctcaagc aggttgatgt tggtaaccaa atctccagtg
    16441 gtgataccac cggaattgtg gtgatcaccc agacgcatcc tatcgattta gtctttaccc
    16501 tgccggaaag cgatatcgct actgtagtgc aggcgcaaaa agccggaaaa ccgctggtgg
    16561 tagaagcctg ggatcgcacc aattcgaaga aattaagtga aggcacgctg ttaagcctcg
    16621 ataaccaaat cgatgccaca accggtacga ttaaagtgaa agcacgcttt aataatcagg
    16681 atgatgcgct gtttcccaat cagtttgtta acgcgcgcat gttagtcgac accgaacaaa
    16741 acgccgtagt gatcccaaca gccgccctgc aaatgggcaa tgaaggccat tttgtctggg
    16801 tgctgaatag cgaaaacaag gtcagcaaac atctggtgac gccgggcatt caggacagtc
    16861 agaaagtggt gatccgtgca ggtatttctg cgggcgatcg cgtggtgaca gacggcattg
    16921 atcgcctgac cgaaggggcg aaagtggaag tggtggaagc ccagagcgcc accactccgg
    16981 aagagaaagc caccagccgc gaatacgcga aaaaaggagc acgctcctga tgcaggtgtt
    17041 acccccgagc agcacaggcg gcccgtcgcg cctttttatt atgcgtcctg tcgccaccac
    17101 gctgctgatg gtggcgatct tactcgccgg gattatcggt tatcgcgccc tgcccgtttc
    17161 ggcgctgccg gaagtggact atccgaccat tcaggtggtc acgctctacc caggtgccag
    17221 cccggatgtc atgacctctg ccgttaccgc gccgctagaa cgccagttcg ggcagatgtc
    17281 tggcctgaaa cagatgtcgt cgcaaagttc cggcggtgcg tcagttatca ctttgcagtt
    17341 ccagctaaca ttaccgctcg atgtcgccga gcaggaagtg caggccgcga ttaacgctgc
    17401 gaccaacttg ttgccgagcg atctgcctaa cccgccggtt tacagcaaag tgaacccggc
    17461 agatccgccg atcatgacgc tcgccgtcac ctcaaccgcc atgccgatga cgcaagtgga
    17521 agatatggtg gaaacccgcg tcgcgcagaa aatctcgcag atttccggtg tcggactggt
    17581 gacgctttcc ggcggtcagc gtccggctgt tcgcgtcaaa cttaacgctc aggcgattgc
    17641 cgccctcggc ctgaccagcg aaaccgtgcg caccgccatt accggcgcta acgttaactc
    17701 ggcaaaaggt agcctcgacg gcccttcccg tgcggttacg ctttccgcta acgaccagat
    17761 gcaatccgcc gaagagtatc gccagctaat catcgcctac cagaacggcg cgccgattcg
    17821 tcttggcgat gtcgcaaccg tagagcaagg tgcagaaaac agctggcttg gcgcatgggc
    17881 gaacaaagaa caggccattg tgatgaatgt tcagcgccag cccggtgcta acattatctc
    17941 caccgccgac agcatccggc agatgctgcc acagctcacc gagagtctgc cgaaatcggt
    18001 gaaggtaaca gtgctttccg atcgcaccac caatatccgc gcatcggtca acgataccca
    18061 gtttgaattg atgatggcta tcgcgctggt agtcatgatt atctacctgt ttttgcgcaa
    18121 tattccggcg accatcattc ccggcttcgc agtgccgctg tcgttaatcg gcaccttcgc
    18181 ggtcatggtg tttctcgatt tttcaatcaa taacctgacg ctgatggcgt taactatcgc
    18241 caccgggttc gtggtcgatg acgccatcgt ggtgatcgaa aatatttccc gctatatcga
    18301 aaaaggcgaa aaaccgttgg cggcggcgct caagggcgca ggtgaaatcg gctttaccat
    18361 tatctcgctg accttctcgc tgattgcggt gttgatccca ctgctgttta tgggcgatat
    18421 cgtcgggcga ctgttccgcg aatttgctat taccctggcg gtagcgattt tgatctcagc
    18481 ggtggtgtcg ctgaccctga caccgatgat gtgcgcgcgg atgctcagcc aggagtcgtt
    18541 gcgtaaacag aaccgcttct cccgtgcctc ggaaaaaatg ttcgacagga taatcgccgc
    18601 ctatggtcgt ggactggcga aagtgctgaa tcatccgtgg ctgaccttaa gcgtggcact
    18661 cagcacgctg ctgcttagcg tgctgctgtg ggtgttcatt ccgaaaggtt tcttcccggt
    18721 acaggacaac ggcattattc agggcacttt gcaggcaccg caatccagct cctttgccaa
    18781 tatggcccag cggcaacgcc aggtcgcgga cgtgattttg caggatccgg cagtgcaaag
    18841 tctgacctca tttgttggcg ttgatggcac taacccgtcg ctgaacagtg cgcgtttgca
    18901 gatcaacctc aaaccgctgg atgaacgtga tgatcgggtg caaaaagtca tcgcccgtct
    18961 gcaaacggcg gtggataaag tgccgggcgt cgatctcttc ctgcaaccaa cgcaggacct
    19021 gaccatcgat actcaggtca gccgcaccca gtaccagttt accttgcagg ccacctcact
    19081 ggatgcgctc agtacctggg tgccagagtt gatggaaaaa ctccagcaac tgccacagct
    19141 ttctgatgtc tccagcgact ggcaggacaa agggctggtg gcgtatgtca atgttgatcg
    19201 cgacagcgcc agccgtctgg ggatcagcat ggcggatgtc gataacgccc tgtacaacgc
    19261 gtttggtcag cggctgattt ccactattta tactcaggct aaccagtatc gcgtggtgct
    19321 ggaacacaac accgaaaata ccccaggcct cgcggcgctg gataccattc gcctgaccag
    19381 cagcgacggt ggcgtggtgc cgctaagctc aattgccaaa attgagcagc gttttgcgcc
    19441 gctctccatc aaccatctgg atcagttccc ggtaacgacc atctccttta acgtgccgga
    19501 taactattcg ctgggtgatg cggtgcaggc gattatggac accgataaga cgctgaatct
    19561 gccggtggat atcaccacgc aattccaggg cagcaccctc gccttccagt cggcgctggg
    19621 cagcactgtc tggctgattg tcgcggcggt ggtggcgatg tatatcgtgc tcggcattct
    19681 gtacgagagc tttattcacc cgatcaccat tctctcgacg ctacccaccg caggggtcgg
    19741 cgcactgctg gcattaatga ttgccggaag tgagctggat gtgattgcga ttatcggcat
    19801 tattttgctg atcggtatcg tgaagaagaa cgccatcatg atgatcgact tcgcgctggc
    19861 tgctgagcgc gagcaaggca tgtcgccgcg cgatgccatc taccaggctt gtctgttgcg
    19921 ttttcgtccg atcctgatga ccaccctggc ggctctgctt ggcgcgctgc cgctgatgtt
    19981 gagtaccggg gtcggcgcgg aactgcgtcg tccgttaggt atcggcatgg tcggcggtct
    20041 gattgtcagc caggtgctga cgctgttcac cacgccggtg atttatctgc tgttcgaccg
    20101 cctggcattg tggaccaaaa gtcgctttgc tcgccatgaa gaggaggcgt aagtgaagtt
    20161 ttttgccctc ttcatttacc gcccggtggc gacgatttta ctgtcggtcg ccattaccct
    20221 ctgcggcata ctgggcttcc gtatgctgcc ggtcgccccg ctgccgcagg tcgattttcc
    20281 ggtgattatg gtcagcgcct cgctgcccgg tgcgtcgccg gagacaatgg cgtcttccgt
    20341 tgccacgccg ctggagcgct cacttgggcg cattgccggg gttagtgaaa tgacctccag
    20401 tagttcgctc ggcagcacgc ggattatttt gcagtttgat tttgaccggg atatcaacgg
    20461 cgcagcgcgt gatgtgcagg cggcgatcaa cgctgcacaa agtttgctgc ccagtgggat
    20521 gcccagccgt ccgacctatc gcaaagcgaa cccgtcggat gcgccaatta tgatcctcac
    20581 gctgacatcc gatacttatt ctcagggtga actgtacgat ttcgcctcga cgcagctggc
    20641 tccgacgatt tcgcaaatcg acggtgttgg tgatgtcgat gtcggcggca gctcactgcc
    20701 cgccgtacgc gtcgggctga atccgcaggc gctgtttaat cagggcgtct cgctggacga
    20761 cgtacgcacc gccatcagca atgccaacgt gcgtaaacca cagggggcac tggaagatgg
    20821 cactcaccgc tggcagatcc agaccaatga tgagctaaaa accgccgctg aatatcagcc
    20881 gttgattatt cattacaaca acggcggcgc ggttcgtctg ggtgatgtgg cgacggtgac
    20941 tgactcggtg caggatgtgc gcaacgccgg gatgaccaac gccaaaccag ctattttgct
    21001 gatgatccgc aagctgccgg aagccaatat tatccagacg gttgacagca tccgggcaaa
    21061 attaccggag ttgcaggaga ccattccggc ggcgattgat ctgcaaattg cccaggatcg
    21121 ctcccccacc attcgcgcct cgctggaaga agtcgagcaa acgctgatta tctcggtggc
    21181 gctggtgatt ctggtggtgt ttttattcct gcgctcgggt cgcgccacta ttattcccgc
    21241 cgttgtggtg ccggtttcgc tgattggtac gtttgcggcg atgtacctgt gcggattcag
    21301 tctcaataac ctgtcgttaa tggcgctcac catcgctact ggtttcgtgg tggatgacgc
    21361 catcgtggtg ctggaaaaca ttgcccgtca tctggaagcg gggatgaaac cactacaggc
    21421 cgcactgcaa ggtactcgcg aagtcggttt tacggtgctg tcgatgagtc tgtcactggt
    21481 ggcggtgttc ctgccgctgc tgttgatggg cggattgccg ggccgactgt tacgcgagtt
    21541 tgccgtgacg ctttctgtcg ccattggtat ttcgttgctg gtttccctga cgctaacgcc
    21601 gatgatgtgt ggctggatgc tgaaagccag caagccgcgt gagcaaaagc gactgcgtgg
    21661 ttttggtcgc atgttggtag ccctgcaaca aggctacggc aagtcgctga aatgggtgct
    21721 caatcatacc cgtctggtgg gcgtggtgct gcttggcacc attgcgctga atatctggct
    21781 atatatctcg atcccgaaaa ccttcttccc ggagcaggac actggcgtgt tgatgggcgg
    21841 gatacaggcg gatcagagta tttcgtttca ggcgatgcgc ggtaagttgc aggatttcat
    21901 gaaaattatc cgtgacgatc cggcagtgga taatgtcacc ggatttaccg gcggttcgcg
    21961 agtgaacagc gggatgatgt ttatcaccct caagccacgc gacgaacgca gcgaaacggc
    22021 gcagcaaatt atcgaccgtc tgcgcgtgaa gctggcgaaa gaaccggggg cgaatctgtt
    22081 cctgatggcg gtacaggata ttcgcgttgg cggacgtcag tcgaacgcca gctatcagta
    22141 cacgttgtta tccgacgacc tggcggcact gcgcgaatgg gagccgaaaa tccgcaaaaa
    22201 actggcgacg ttgccggaac tggcggacgt gaactccgat cagcaggata acggcgcgga
    22261 gatgaatctg gtttacgacc gcgacaccat ggcacggctg ggaatcgacg tacaagccgc
    22321 caacagtctg ttaaataacg ccttcggtca gcggcaaatc tcgaccattt accagccgat
    22381 gaaccagtat aaagtggtga tggaagtgga tccgcgctat acccaggaca tcagtgcgct
    22441 ggaaaaaatg ttcgttatca ataacgaagg caaagcgatc ccgctgtcgt atttcgctaa
    22501 atggcaaccg gcgaatgccc cactatcggt gaatcatcag ggattatcgg cggcctcgac
    22561 catttcgttt aacctgccga ccggaaaatc gctctcggac gccagtgcgg cgatcgatcg
    22621 cgcaatgacc cagcttgggg tgccttcgac ggtgcgcggc agttttgccg gcacggcgca
    22681 ggtgttccag gagacgatga actcgcaggt gatcctgatt atcgccgcca tcgccacggt
    22741 gtatatcgtg ctgggtatcc tttacgagag ttacgtacat ccgctgacga ttctctccac
    22801 cctgccctcg gcgggcgttg gagcgctgtt ggcgctggag ctgttcaatg ccccgttcag
    22861 cctaatcgcc ctgataggga tcatgctatt aatcggcatc gtgaagaaaa acgccattat
    22921 gatggtcgat tttgcgcttg aagcccaacg gcacggtaac ctgacgccgc aggaagctat
    22981 tttccaggcc tgtctgctgc gttttcgccc gattatgatg accaccctgg cggcgctgtt
    23041 tggtgcgctg ccgctggtat tgtcgggcgg cgacggctcg gagctgcggc aacccctggg
    23101 gatcaccatt gtcggcggac tggtaatgag ccagctcctt acgctgtata ccacgccggt
    23161 ggtgtatctc tttttcgacc gtctgcggct gcgtttttcg cgtaaaccta aacaaacggt
    23221 aaccgagtaa atgacagatc ttcccgacag cacccgttgg caattgtgga ttgtggcttt
    23281 cggcttcttt atgcagtcgc tggacaccac catcgtaaac accgcccttc cctcaatggc
    23341 gcaaagcctc ggggaaagtc cgttgcatat gcacatggtc attgtctctt atgtgctgac
    23401 cgtggcggtg atgctgcccg ccagcggctg gctggcggac aaagtcggcg tgcgcaatat
    23461 tttctttacc gccatcgtgc tgtttactct cggttcactg ttttgcgcgc tttccggcac
    23521 gctgaacgaa ctgttgctgg cacgcgcgtt acagggcgtt ggcggcgcga tgatggtgcc
    23581 ggtcggcaga ttgacggtga tgaaaatcgt accgcgcgag caatatatgg cggcgatgac
    23641 ctttgtcacg ttacccggtc aggtcggtcc gctgctcggt ccggcgctcg gcggtctgct
    23701 ggtggagtac gcgtcgtggc actggatctt tttgatcaac attccggtgg ggattatcgg
    23761 tgcgatcgcc acattgatgt taatgccgaa ctataccatg cagacgcggc gcttcgatct
    23821 ctccggcttt ttattgctag cggttggcat ggcggtatta accctggcgc tggacggcag
    23881 taaaggtaca ggtttatcgc cgctgacgat tgatggcctg gtcgcagttg gcgtggtggc
    23941 actggtgctt tatttgctgc acgccagaaa taacaaccgc gctcttttca gtctgaaact
    24001 gttccgcact cgtacctttt cgctgggcct ggcggggagc tttgccggac gtattggcag
    24061 tggcatgttg ccctttatga caccggtttt cctgcaaatt ggcctcggtt tctcgccgtt
    24121 tcatgccgga ctgatgatga tcccgatggt gcttggcagc atgggaatga agcgaattgt
    24181 tgtacaggtg gtgaatcgct ttggttatcg tcgggtactg gtagcgacca cgctgggtct
    24241 gtcgctggtc accctgttgt ttatgactac cgctctgctg ggctggtact acgttttgcc
    24301 gttcgtcctg tttttacaag ggatggtcaa ctcgacgcgt ttctcctcca tgaacaccct
    24361 gacgctgaaa gatctcccgg acaatctggc gagcagcgga aacagcctgc tgtcgatgat
    24421 tatgcaattg tcgatgagta tcggcgtcac catcgccggg ctgttgctgg gactttttgg
    24481 ttcgcagcat gtcagcgtcg acagcggcac cacacaaacc gtctttatgt acacctggct
    24541 tagcatggcg tttatcatcg cccttccggc gttcatcttt gccagagtgc cgaacgatac
    24601 gcatcaaaat gtagctattt cgcggcgaaa aaggagcgcg caatgaagtt ctggcgacct
    24661 ggtattaccg gcaaactgtt tctggcgatt ttcgccacct gcattgtctt gctgatcagt
    24721 atgcactggg cggtgcgtat cagttttgag cgtggcttta ttgattacat caagcatggt
    24781 aatgaacagc gattacaact gttaagtgat gcgcttggcg agcagtatgc gcagcatggc
    24841 aactggcgct tcctgcgcaa caatgatcgc tttgtctttc agatcctgcg ttcatttgaa
    24901 cacgataatt cggaagataa acccggcccg ggtatgccac cgcacggctg gcgtacccag
    24961 ttctgggtgg ttgatcaaaa caacaaagtg ctggttggtc cgcgagcgcc gattccacct
    25021 gacggtacac ggcgacccat tctggtcaac ggtgcggaag ttggcgcggt gatcgcctcc
    25081 cccgttgagc ggttaacgcg caatactgat atcaatttcg ataaacaaca gcggcaaacc
    25141 agctggttga ttgtcgctct ggcaacgtta ctcgcggcgc tcgccacctt tctgctggcg
    25201 cgcggtttac tggcaccggt aaaacgactt gtcgatggca cgcacaaact ggcggcgggc
    25261 gatttcacta cccgcgtaac gcccaccagt gaagatgaac tgggcaaact ggcgcaagac
    25321 ttcaaccagc ttgccagcac actggagaaa aaccagcaaa tgcggcgcga ttttatggcc
    25381 gatatttctc acgaactgcg tacgccatta gcggtgctgc gcggtgaact ggaagccatt
    25441 caggatggcg tgcgtaaatt cacgccggag acggtggcgt ctttacaggc ggaggtcggt
    25501 acactgacca aactggttga cgatctccat cagttgtcga tgtctgatga aggcgctctc
    25561 gcctatcaaa aagcaccggt agatttgatc ccactgctgg aagtggcggg cggcgcattt
    25621 cgcgaacgat ttgccagccg tggcctgaaa ctgcagtttt ccctgccaga cagtattacc
    25681 gtatttggcg atcgcgaccg tttaatgcag ttattcaata acttactcga aaacagcctg
    25741 cgctacactg atagcggcgg cagcctgaaa atctctgccg agcagcacga caaaacggtg
    25801 cgcctgacct ttgccgacag tgcgccaggt gtcagtgacg agcagctaca aaaattattt
    25861 gaacgttttt atcgcaccga aggttcccgc aaccgcgcca gcggtggttc cgggctgggg
    25921 ctggcgattt gcctgaacat tgttgaagca cataatggcc gcattattgc tgcccattcg
    25981 ccttttggcg gggtaagcat tacagtagag ttaccgctgg aacgggattt acagagagaa
    26041 gtatgaccga gttaccaatc gacgaaaaca caccgcgtat tttgatcgtg gaagatgaac
    26101 cgaagctggg gcagttgctc attgattatc tgcgtgctgc gagctatgcg ccgacgctta
    26161 tcagccacgg cgatcaggta ctgccgtatg tgcgccagac accaccggat ctgatcctgt
    26221 tagatctgat gctccctggc accgatggcc tgacgctgtg ccgggaaatt cgtcgttttt
    26281 ctgacattcc gatcgtgatg gtgacggcaa aaatcgaaga gatcgatcgc ctgctggggc
    26341 tggagattgg cgcagatgat tatatctgta agccgtacag cccacgggaa gtggtagcgc
    26401 gcgtcaaaac cattttgcgc cgttgcaaac cgcagcgcga gttgcagcaa caggatgctg
    26461 aaagcccgtt gattatcgac gaaggtcgtt ttcaggcttc atggcgcggt aaaatgcttg
    26521 acctgacgcc tgcggaattt cgtctgctga aaacgctctc tcatgaacca ggaaaagtgt
    26581 tctcccgcga gcatttgctc aatcatcttt atgacgacta ccgcgtagta accgaccgca
    26641 ccatcgacag ccacattaaa aacctgcgcc gcaagctgga atctctcgac gccgaacagt
    26701 catttatccg cgccgtttac ggcgttggtt accgctggga agccgacgcc tgccgcatcg
    26761 tttagtttta gcgacatgac tttgttagcc ggagatggcg ttcagaccag atccggcaac
    26821 attatcccac acatggtcag caaactgaca ttatctctcc gccctggcag gcatcagaaa
    26881 atcgctcata ctttaatcgg taaacagcac ctttagatgc tgttttcgat acgcaatttc
    26941 aatcaaggag tcattatggc tggttggttt gaactcagta agagcagtga taatcagttc
    27001 cggtttgtgc taaaagcggg caatggtgag actatcctca ccagcgagct gtatacctca
    27061 aaagcctctg cggaaaaggg catcgcgtcg gtgcgtagca acagcccgca agaagaacgc
    27121 tatgagaaaa aaacggcaag taacggcaaa ttctatttca atctgaaagc cgctaatcat
    27181 caaattatcg gctccagcca gatgtacgcc accgcgcaat ctcgtgaaac cggaattgcc
    27241 tccgttaaag ccaatggcac aagccagacg gtgaaagaca atacgtaatt acgatgccgg
    27301 gcgtgggttg ttggcgtccg gctttatatc caaataacgc ttagttatta ataattaaga
    27361 gtaaccgccg ccattaaaat agtgggcact gacgagcact cgttgtgctt tctttgttta
    27421 ccatcccata cttatcctcc tgaacatgtt catgtgccaa aatatcttct aatactttcg
    27481 tgacgctatc cggtttatga catacactga tgtaagattt ttacttacag gcgggcgtaa
    27541 aatggccaga acgatgacgg ttgatctcgg cgatgagttg cgtgaattta tcgagtcctt
    27601 aattgaatcc ggcgactatc gcacccaaag cgaagtgatc cgtgagtcac tgcgattact
    27661 tcgagaaaag caagcagagt ctcgcctgca agcgttacgt gacatgctcg cagaagggtt
    27721 gagtagtggt gaagctcagc cgtgggaaaa ggacgcgttc ttacggaagg tgaaagcagg
    27781 gataaggaaa taatgtgcgt attattaaac tcatgccaaa agccaatgag gatttagaag
    27841 gcatctggta ttacagctat caccatttcg gcgaaccaca agccgacaga tatgtggaac
    27901 atctttcaga cgttctccag attctgagta acaataatat aggtacgccc agacctgaat
    27961 taggcgaagg tatttttgtt cttccttttg aacgccacgt catttatttc ctgcaatcac
    28021 caggggaaat tatcgtcatt cgtatcctta accaaaacca ggacgccacc agacatttac
    28081 actggagcta aacccgccga ttgcgctaca atgcccgccc ttaaagtggg ggcactcccc
    28141 taaccgcttc atcaggtgaa gcggatctga cctgtcatca gaacgagaga attatgttta
    28201 aaccggaact cctttccccg gcgggaacgc tgaaaaatat gcgttacgct ttcgcttatg
    28261 gcgcagatgc tgtttatgcg ggccagccgc gttattccct gcgtgtgcgc aacaacgaat
    28321 tcaaccacga aaatcttcag ctcggcatca atgaagccca cgcgctgggg aaaaagtttt
    28381 atgtcgtggt caacattgca ccgcacaacg ccaagctgaa aacctttatc cgtgacctga
    28441 aaccggtggt ggaaatgggg ccggatgcgc tgattatgtc cgatccaggg ctgattatgc
    28501 tggtgcgtga gcacttccct gaaatgccga tccacctttc ggtgcaggct aacgccgtga
    28561 actgggcgac ggtgaaattc tggcagcaaa tgggcctgac ccgcgtgatc ctctctcgcg
    28621 agctgtcgct ggaagagatt gaagagatcc gcaatcaggt gccggatatg gagatcgaga
    28681 tcttcgttca cggcgcgctg tgcatggcct actccggtcg ctgcctgctc tctggctata
    28741 tcaacaagcg cgacccgaac cagggcacct gcaccaacgc ctgccgctgg gagtacaacg
    28801 tccaggaagg gaaagaagat gatgttggca acatcgtaca caagtacgag ccgattccgg
    28861 tgcaaaatgt tgagccgacg ctgggtatcg gcgcaccaac cgacaaagtg tttatgatcg
    28921 aagaggccca gcgtccgggc gagtatatga ccgcgtttga agatgagcac ggcacttaca
    28981 tcatgaactc gaaagatctg cgcgccatcg cccatgtaga acgcctgacc aaaatgggcg
    29041 tgcattcgct gaaaatcgaa ggtcgtacca aatctttcta ctattgtgca cgcaccgcac
    29101 aggtttaccg caaagctatc gatgacgccg ctgcgggaaa accgttcgat accagcctgc
    29161 tggaaactct ggaaggtctg gcgcatcgtg gctataccga aggtttcctg cgtcgtcata
    29221 ctcacgacga ttatcagaac tacgaatacg gttattcagt ttctgaccgc cagcagtttg
    29281 ttggtgagtt taccggtgag cgcaaggggg acctcgcggc ggtaacggtg aaaaataaat
    29341 tctccgttgg cgacagcctt gagctgatga cgccgcaagg caacattaat tttacccttg
    29401 agcacatgga aaacgccaaa ggcgaagcta tgccgatagc accaggcgat ggttatactg
    29461 tgtggctccc ggtcccgcag gatcttgagc tcaattacgc gctgctgatg cgtaatttct
    29521 ccggggaaac cacgcgtaat ccccacggta agtgattaat ttcgattatt tttcccggat
    29581 ggaaaattct tagaaaccga tcacatacag ctgcatttat taaggttatc atccgtttcg
    29641 ctgaaaaaca taacccataa aatgctagct gtaccaggaa ccacctcctt agcctgtgta
    29701 atctccctta cacgggctta ttttttatgc ataagcccta tccctggtca ccgtcttcca
    29761 ttgaccacat cgatagaatc tcccttcata gcacgatgcc tttcacgtaa cggcatcgtg
    29821 ctcgcacagg ttccggctaa gcacaaccag aacgcgcatg tttgacgctt accaaaaaat
    29881 attctcactc tccacatttg aatgtcagac gagcgacgcc atgtaatcct gcaccttctg
    29941 tcttcaggtc aactatctgc atttttttgc cctgagtaac acagaaatgg gctgcatcat
    30001 tttttactat attttctgca ccagatattc tgcccctggc taaagaagct tcggcttcgg
    30061 tgtagtattg gttatcgagt ttacgctgaa tattactttt atatgcaaga ccaaatttac
    30121 cgatacttgt ctcatcatta tgcacagcac aaccagacac aataaaaata ctaattaatg
    30181 atatagcagc tatctttttc atctcacctt cc
//
LOCUS       DAPGWB010000042        29949 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.042, whole genome shotgun sequence.
ACCESSION   DAPGWB010000042 DAPGWB010000000
VERSION     DAPGWB010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 29949)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29949)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29949
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.042"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            248..631
                     /gene="secE"
                     /locus_tag="RHX79_001840"
     CDS             248..631
                     /gene="secE"
                     /locus_tag="RHX79_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007665874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDV2197026.1"
                     /translation="MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLR
                     ALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTA
                     VMSLILWGLDGILVRLVSFITGLRF"
     gene            633..1178
                     /gene="nusG"
                     /locus_tag="RHX79_001841"
     CDS             633..1178
                     /gene="nusG"
                     /locus_tag="RHX79_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005280494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDV2197027.1"
                     /translation="MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMV
                     PTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAP
                     ISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
                     SVSIFGRATPVELDFSQVEKA"
     gene            1337..1765
                     /gene="rplK"
                     /locus_tag="RHX79_001842"
     CDS             1337..1765
                     /gene="rplK"
                     /locus_tag="RHX79_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDV2197028.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     KTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKIS
                     RAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED"
     gene            1769..2473
                     /gene="rplA"
                     /locus_tag="RHX79_001843"
     CDS             1769..2473
                     /gene="rplA"
                     /locus_tag="RHX79_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDV2197029.1"
                     /translation="MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDV
                     AVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAD
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTM
                     GAGVAVDQAGLSASVN"
     gene            2886..3383
                     /gene="rplJ"
                     /locus_tag="RHX79_001844"
     CDS             2886..3383
                     /gene="rplJ"
                     /locus_tag="RHX79_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002438625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDV2197030.1"
                     /translation="MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKA
                     GREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKA
                     NAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRD
                     AKEAA"
     gene            3450..3815
                     /gene="rplL"
                     /locus_tag="RHX79_001845"
     CDS             3450..3815
                     /gene="rplL"
                     /locus_tag="RHX79_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDV2197031.1"
                     /translation="MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAG
                     PVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKD
                     DAEALKKALEEAGAEVEVK"
     gene            4135..8163
                     /gene="rpoB"
                     /locus_tag="RHX79_001846"
     CDS             4135..8163
                     /gene="rpoB"
                     /locus_tag="RHX79_001846"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004870488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDV2197032.1"
                     /translation="MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPE
                     GQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRL
                     VIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTE
                     QILDLFFEKVIFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQ
                     LEKDDVKLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLLAKLSQSGHKRIE
                     TLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSE
                     DRYDLSAVGRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
                     RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEG
                     PNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQANSNLD
                     EEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDE
                     MYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQ
                     NMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPN
                     VGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLF
                     SRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLE
                     AKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYD
                     ENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQ
                     RAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDL
                     PTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
                     AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
                     ESFNVLLKEIRSLGINIELEDE"
     gene            8240..12463
                     /gene="rpoC"
                     /locus_tag="RHX79_001847"
     CDS             8240..12463
                     /gene="rpoC"
                     /locus_tag="RHX79_001847"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDV2197033.1"
                     /translation="MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETI
                     NYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERM
                     GHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQIL
                     TEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLT
                     KRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGK
                     QGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLAT
                     TIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
                     PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVL
                     GLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAK
                     TSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQI
                     MYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKV
                     IDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQL
                     AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
                     RLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADI
                     LVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEA
                     IGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGK
                     LVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITE
                     VSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDV
                     LIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFE
                     ARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERV
                     ERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLR
                     KATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEA
                     PAAPQVTAEDASASLAELLNAGLGGSDNE"
     gene            complement(12704..13837)
                     /gene="thiH"
                     /locus_tag="RHX79_001848"
     CDS             complement(12704..13837)
                     /gene="thiH"
                     /locus_tag="RHX79_001848"
                     /EC_number="4.1.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000847471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HDV2197034.1"
                     /translation="MKTFSDRWRQLDWDDIRLRINGKTAVDVERALNASQFTRDDMMA
                     LLSPAASGYLEQLAQRAQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKR
                     KTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ
                     PLAETEYAELKQLGLDGVMVYQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGID
                     KIGLGALIGLSDNWRVDCYMVAEHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMD
                     ERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSAFSKTQPGGYADNHP
                     ELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGHASQRP"
     gene            complement(13834..14604)
                     /gene="thiG"
                     /locus_tag="RHX79_001849"
     CDS             complement(13834..14604)
                     /gene="thiG"
                     /locus_tag="RHX79_001849"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418418.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HDV2197035.1"
                     /translation="MLRIADKTFDSHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKR
                     VDLRQHNDAILEPLIAAGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDA
                     RWLLPDPIETLKAAEMLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQG
                     LETRAMLEIIIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAK
                     AFRLAVEAGLLARQSGPGSRSHFAHATSPLTGFLEASA"
     gene            complement(14606..14806)
                     /gene="thiS"
                     /locus_tag="RHX79_001850"
     CDS             complement(14606..14806)
                     /gene="thiS"
                     /locus_tag="RHX79_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HDV2197036.1"
                     /translation="MQILFNDQPMQCAAGQTVHELLEQLDQRQAGAALAINQQIVPRE
                     QWTQHIVQDGDQILLFQVIAGG"
     gene            complement(14790..15545)
                     /gene="thiF"
                     /locus_tag="RHX79_001851"
     CDS             complement(14790..15545)
                     /gene="thiF"
                     /locus_tag="RHX79_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole biosynthesis adenylyltransferase ThiF"
                     /protein_id="HDV2197037.1"
                     /translation="MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAA
                     LYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA
                     LQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVVLNTPLITASAVGFGGQLMV
                     LTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGE
                     LRLFDGKSSQWRSLALRRASGCPVCGGSNADPV"
     gene            complement(15538..16173)
                     /gene="thiE"
                     /locus_tag="RHX79_001852"
     CDS             complement(15538..16173)
                     /gene="thiE"
                     /locus_tag="RHX79_001852"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709787.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDV2197038.1"
                     /translation="MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRR
                     DEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAG
                     LRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYP
                     TVAIGGVSLARAPAVIATGVGSIAVVSAITQAADWRLATAQLLEIAGVGDE"
     gene            complement(16173..18068)
                     /gene="thiC"
                     /locus_tag="RHX79_001853"
     CDS             complement(16173..18068)
                     /gene="thiC"
                     /locus_tag="RHX79_001853"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HDV2197039.1"
                     /translation="MSATKLTRREQRARAQHFIDTLEGTAFPNSKRIYITGTHPGVRV
                     PMREIQLSPTLIGGSKEQPQYEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWID
                     ARGDTEELTVRSSDYTKARLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITP
                     EMEFIAIRENMGRERIRSEVLRHQHPGMSFGARLPENITAEFVRDEVAAGRAIIPANI
                     NHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYI
                     HETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHA
                     GVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSL
                     GDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEE
                     LEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKE
                     DVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARAYH
                     DETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAATQTIEMGMADMSENFRARGGEI
                     YLRKEEA"
     regulatory      complement(18149..18249)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(18301..18777)
                     /gene="rsd"
                     /locus_tag="RHX79_001854"
     CDS             complement(18301..18777)
                     /gene="rsd"
                     /locus_tag="RHX79_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma D regulator"
                     /protein_id="HDV2197040.1"
                     /translation="MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKE
                     SYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQ
                     IMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA"
     gene            18872..19645
                     /gene="nudC"
                     /locus_tag="RHX79_001855"
     CDS             18872..19645
                     /gene="nudC"
                     /locus_tag="RHX79_001855"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HDV2197041.1"
                     /translation="MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRAL
                     QIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCG
                     HEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGF
                     VEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPK
                     ELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE"
     gene            19685..20749
                     /gene="hemE"
                     /locus_tag="RHX79_001856"
     CDS             19685..20749
                     /gene="hemE"
                     /locus_tag="RHX79_001856"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDV2197042.1"
                     /translation="MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAG
                     DFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSP
                     VTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRD
                     YQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIA
                     DARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVP
                     PEHAGVFVEAVHRLSEQYHR"
     gene            20759..21430
                     /gene="nfi"
                     /locus_tag="RHX79_001857"
     CDS             20759..21430
                     /gene="nfi"
                     /locus_tag="RHX79_001857"
                     /EC_number="3.1.21.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease V"
                     /protein_id="HDV2197043.1"
                     /translation="MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEV
                     TRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFV
                     DGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLA
                     WVWRSKARCNPLFIATGHRVSVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRY
                     TANQP"
     gene            21473..22063
                     /locus_tag="RHX79_001858"
     CDS             21473..22063
                     /locus_tag="RHX79_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjaG family protein"
                     /protein_id="HDV2197044.1"
                     /translation="MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGD
                     GQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSE
                     LVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEI
                     FRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ"
     gene            22250..22522
                     /gene="hupA"
                     /locus_tag="RHX79_001859"
     CDS             22250..22522
                     /gene="hupA"
                     /locus_tag="RHX79_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-alpha"
                     /protein_id="HDV2197045.1"
                     /translation="MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQL
                     VGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK"
     gene            22535..23230
                     /locus_tag="RHX79_001860"
     CDS             22535..23230
                     /locus_tag="RHX79_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709795.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1481 domain-containing protein"
                     /protein_id="HDV2197046.1"
                     /translation="MNSFNEGVVSPLLSFWRRSLMLAGALFLTACSHNSSLPPFTASG
                     FAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPV
                     NIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQG
                     RWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVAN
                     SDFCRWQPNEKTF"
     gene            complement(23232..23657)
                     /gene="zraP"
                     /locus_tag="RHX79_001861"
     CDS             complement(23232..23657)
                     /gene="zraP"
                     /locus_tag="RHX79_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc resistance sensor/chaperone ZraP"
                     /protein_id="HDV2197047.1"
                     /translation="MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQ
                     QTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLD
                     ELRVKRDIAMAEAGIPRGTGMGMGYGGCGGGGHMGMGHW"
     gene            23895..25271
                     /gene="zraS"
                     /locus_tag="RHX79_001862"
     CDS             23895..25271
                     /gene="zraS"
                     /locus_tag="RHX79_001862"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     ZraS"
                     /protein_id="HDV2197048.1"
                     /translation="MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAA
                     ARQTLLEKGSVLIRALESGSRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTI
                     VMHSNSGMVGKQLYSPQEMQQLHPGDEEAWRRIDSADGEPVLEIYRQFQPMFAAGMHR
                     MRHMQQYAATPQAIFIAFDASNIVSAEDREQRNTLIILFALATVLLASVLSFFWYRRY
                     LRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQL
                     AQVMAKEADRLNRVVSELLELVKPTHLALQAVDLNTLINHSLQLVSQDANSREIQLRF
                     TANDTLPEIQADPDRLTQVLLNLYLNAIQAIGQHGVISVTVSESGAGVKISVTDSGKG
                     IAADQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLPVN
                     ITRKDPQG"
     gene            25268..26593
                     /gene="zraR"
                     /locus_tag="RHX79_001863"
     CDS             25268..26593
                     /gene="zraR"
                     /locus_tag="RHX79_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent response regulator
                     transcription factor ZraR"
                     /protein_id="HDV2197049.1"
                     /translation="MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQ
                     VREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALD
                     YLIKPLDFDNLQATLEKALAHTHSIDAETPAVTASQFGMVGKSSAMQHLLSEIALVAP
                     SEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAF
                     TGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVR
                     LIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERN
                     RKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISERELPLAIASTPIP
                     LGQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR"
     gene            complement(26590..27879)
                     /gene="purD"
                     /locus_tag="RHX79_001864"
     CDS             complement(26590..27879)
                     /gene="purD"
                     /locus_tag="RHX79_001864"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDV2197050.1"
                     /translation="MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQ
                     NVAIGVTDIPALLDFAQNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLE
                     GSKAFTKDFLARHKIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMT
                     LEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRV
                     GDKDTGPNTGGMGAYSPAPVVTDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMI
                     DKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVELCLAACEGKLDEKTSEWDERASLGV
                     VMAAGGYPGDYRTGDVIHGLPLEEVADGKVFHAGTKLADDEQVVTNGGRVLCVTALGH
                     TVAEAQKRAYALMTDIHWDDCFCRKDIGWRAIEREQN"
     gene            complement(27891..29480)
                     /gene="purH"
                     /locus_tag="RHX79_001865"
     CDS             complement(27891..29480)
                     /gene="purH"
                     /locus_tag="RHX79_001865"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDV2197051.1"
                     /translation="MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLL
                     AEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVV
                     VNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEM
                     DDNEGSLTLATRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNL
                     NFIKKQDMRYGENSHQQAAFYIEENVKEASVATATQVQGKALSYNNIADTDAALECVK
                     EFAEPACVIVKHANPCGVAIGNSILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAI
                     ISRQFVEVIIAPSASEEALKITAAKQNVRVLTCGQWGERVPGLDFKRVNGGLLVQDRD
                     LGMVGAEELRVVTQRQPTEQELRDALFCWKVAKFVKSNAIVYAKNNMTIGIGAGQMSR
                     VYSAKIAGIKAADEGLEVKGSSMASDAFFPFRDGIDAAAAAGVTCVIQPGGSIRDDEV
                     IAAADEHGIAMLFTDMRHFRH"
BASE COUNT         7032 a         7791 c         8240 g         6886 t
ORIGIN      
        1 gcaaaagttc tgagctaatt gccgataaca tttgacgcaa tgcgcactaa aagggcatca
       61 tttgatgccc tttttgcacg ctttcgtacc agaacctggc tcatcagtga ttttctttgt
      121 cataatcatt gctgagacag gctctgttga gggcgtataa tccgaaaagc taatacgcgt
      181 ttcgatttgg tttgcctcgc gatcgcgggg tgaaaatgtt tgtagaaaac ttctgacagg
      241 ttggtttatg agtgcgaata ccgaagctca aggaagcggg cgcggcctgg aagcgatgaa
      301 gtgggtcgtt gtggtggcat tgctcctggt ggcgattgtc ggcaactacc tttatcgcga
      361 cattatgctg ccgctgcgtg cgctggccgt agtaattctg attgctgcag cgggtggtgt
      421 cgcgctgtta acgacaaaag gtaaagctac cgttgctttt gcccgtgaag cgcgtaccga
      481 agtccgtaag gtcatttggc cgactcgcca ggaaacattg cacaccacgc tgattgtggc
      541 tgcggttacc gcagtaatgt cactgatcct gtggggactg gatggtattc tggttcgcct
      601 ggtatccttt atcactggcc tgaggttcta agatgtctga agctcctaaa aagcgctggt
      661 acgtcgttca ggcgttttcc ggttttgaag gccgcgtagc aacgtcgctg cgtgagcata
      721 tcaaattaca caacatggaa gatttgtttg gtgaagtcat ggtaccaacc gaagaagtgg
      781 ttgaaatccg tggcggtcag cgtcgcaaaa gcgaacgtaa attcttccct ggctacgtcc
      841 tcgttcagat ggtgatgaac gacgcgagct ggcacctggt gcgcagcgta ccgcgtgtga
      901 tgggcttcat cggcggtact tccgatcgtc ctgcgccaat cagcgataaa gaagtcgatg
      961 cgattatgaa ccgcctgcag caggttggtg ataagccgcg tccgaaaacg ctgtttgaac
     1021 cgggtgaaat ggtccgtgtt aatgatggtc cgttcgctga cttcaacggt gttgttgaag
     1081 aagtggatta cgagaaatct cgtctgaaag tgtctgtttc tatcttcggt cgtgcgaccc
     1141 cggtagagct ggacttcagc caggttgaaa aagcctaacc cagcgatcaa aaaagcggcg
     1201 atttaatcgt tgcacaaggc gtgagattgg aatacaattt cgcgcctttt gtttttatgg
     1261 gccttgcccg taaaacgatt ttttatatca cggggagcct ctcagaggcg ttattaccca
     1321 acttgaggaa tttataatgg ctaagaaagt acaagcctat gtcaagctgc aggttgcagc
     1381 tggtatggct aacccgagtc cgccagtagg tccggctctg ggtcagcagg gcgtaaacat
     1441 catggaattc tgcaaagcgt tcaacgcaaa aactgattcc atcgaaaaag gtctgccgat
     1501 tccggtagta atcaccgttt acgctgaccg ttctttcact ttcgttacca agactccgcc
     1561 ggcagcagtt ctgctgaaaa aagcggctgg tatcaagtct ggttccggta agccgaacaa
     1621 agacaaagtg ggtaaaattt cccgcgctca gctgcaggaa atcgcgcaga ccaaagctgc
     1681 cgacatgact ggtgccgaca ttgaagcgat gactcgctcc atcgaaggta ctgcacgttc
     1741 catgggcctg gtagtggagg actaagaaat ggctaaactg accaagcgca tgcgtgttat
     1801 ccgcgagaaa gttgatgcaa ccaaacagta cgacatcaac gaagctatcg cactgctgaa
     1861 agagctggcg actgctaaat tcgtagaaag cgtggacgta gctgttaacc tcggcatcga
     1921 cgctcgtaaa tctgaccaga acgtacgtgg tgcaactgta ctgccgcacg gtactggccg
     1981 ttccgttcgc gtagccgtat ttacccaagg tgcaaacgct gaagctgcta aagctgcagg
     2041 cgcagaactg gtaggtatgg aagatctggc tgaccagatc aagaaaggcg aaatgaactt
     2101 tgacgttgtt attgcttctc cggatgcaat gcgcgttgtt ggccagctgg gccaggttct
     2161 gggtccgcgc ggcctgatgc caaacccgaa agtgggtact gtaacaccga acgttgctga
     2221 agcggttaaa aacgctaaag ctggccaggt tcgttaccgt aacgacaaaa acggcatcat
     2281 ccacaccacc atcggtaaag tggactttga cgctgacaaa ctgaaagaaa acctggaagc
     2341 tctgctggtt gcgctgaaaa aagcaaaacc gactcaggcg aaaggcgtgt acatcaagaa
     2401 agttagcatc tccaccacca tgggtgcagg tgttgcagtt gaccaggctg gcctgagcgc
     2461 ttctgtaaac taatgccttt acgtgggcgg tgattttgtc tacaatctta cccccacgta
     2521 taatgcttaa tgcagacgta tatccgagat attcgggttg tggcaaggcg gcaactgagt
     2581 gagtcgccag gagcatagct aactatgtga ctggtgcgaa tgaaggaagc caacgccgcc
     2641 acaagttgaa tagcgacgga tagaaaagat ttgttcgttg gagcctggcc tatccaggcc
     2701 tccgtcgaag accgcaggag tttcgcaaga aacttaatcc cctgcgtaga cggtgacaga
     2761 acgctaagat tattctttta tattctggct tgtttctgct caccgtaatt aagacgctct
     2821 ctccgtttgg aggagtgaag tgagttccag agattttctc tggcaaacat ccaggagcaa
     2881 agctaatggc tttaaatctt caagacaaac aagcgattgt tgctgaagtc agcgaagtag
     2941 ccaaaggcgc gctgtctgca gtagttgcgg attcccgtgg cgtaactgta gataaaatga
     3001 ctgaactgcg taaagcaggt cgcgaagctg gcgtatacat gcgtgttgtt cgtaacaccc
     3061 tgctgcgccg tgctgttgaa ggtactccgt tcgagtgcct gaaagacgcg tttgttggtc
     3121 cgaccctgat tgcatactct atggaacacc cgggcgctgc tgctcgtctg ttcaaagagt
     3181 tcgcgaaagc gaatgcaaaa tttgaggtca aagccgctgc ctttgaaggt gagctgatcc
     3241 cggcgtctca gatcgaccgc ctggcaactc tgccgaccta cgaagaagca attgcacgcc
     3301 tgatggcaac catgaaagaa gcttcggctg gcaaactggt tcgtactctg gctgctgtac
     3361 gcgatgcgaa agaagctgct taatcgcagt tatcttttta acgcattcgc ttacgtataa
     3421 acttattctg atattcagga acaatttaaa tgtctatcac taaagatcaa atcattgaag
     3481 cagttgcagc tatgtctgta atggacgttg tagaactgat ctctgcaatg gaagaaaaat
     3541 tcggtgtttc cgctgctgct gctgtagctg tagctgctgg cccggttgaa gctgctgaag
     3601 aaaaaactga attcgacgta attctgaaag ctgctggcgc taacaaagtt gctgttatca
     3661 aagcagtacg tggcgcaact ggcctgggtc tgaaagaagc taaagacctg gtagaatctg
     3721 caccggctgc tctgaaagaa ggcgtgagca aagacgacgc agaagcactg aaaaaagctc
     3781 tggaagaagc tggcgctgaa gttgaagtta aataagccaa cccttccggt tgcagcctga
     3841 gaaatcaggc tgatggctgg tgacttttta gtcaccagcc tttttgcgct gtaaggcgcc
     3901 agtagcgttt cacactgttt gactactgct gtgcctttca atgcttgttt ctatcgacga
     3961 cttaatatac tgcgacagga cgtccgttct gtgtaaatcg caatgaaatg gtttaagcgt
     4021 gatagcaaca ggcattgcgg aaagtgttcc attttccggt caacaaaata gtgttgcaca
     4081 aactgtccgc tcaatggaca gatgggtcga cttgtcagcg agctgaggaa ccctatggtt
     4141 tactcctata ccgagaaaaa acgtattcgt aaggattttg gtaaacgtcc acaagttctg
     4201 gatgtacctt atctcctttc tatccagctt gactcgtttc agaaatttat cgagcaagat
     4261 cctgaagggc agtatggtct ggaagctgct ttccgttccg tattcccgat tcagagctac
     4321 agcggtaatt ccgagctgca atacgtcagc taccgccttg gcgaaccggt gtttgacgtc
     4381 caggaatgtc aaatccgtgg cgtgacctat tccgcaccgc tgcgcgttaa actgcgtctg
     4441 gtgatctatg agcgcgaagc gccggaaggc accgtaaaag acattaaaga acaagaagtc
     4501 tacatgggcg aaattccgct catgacagac aacggtacct ttgttatcaa cggtactgag
     4561 cgtgttatcg tttcccagct gcaccgtagt ccgggcgtct tctttgactc cgacaaaggt
     4621 aaaacccact cttcgggtaa agtgctgtat aacgcgcgta tcatccctta ccgtggttcc
     4681 tggctggact tcgaattcga tccgaaggac aacctgttcg tacgtatcga ccgtcgccgt
     4741 aaactgcctg cgaccatcat tctgcgcgcc ctgaactaca ccacagagca gatcctcgac
     4801 ctgttctttg aaaaagttat ctttgaaatc cgtgataaca agctgcagat ggaactggtg
     4861 ccggaacgcc tgcgtggtga aaccgcatct tttgacatcg aagctaacgg taaagtgtac
     4921 gtagaaaaag gccgccgtat cactgcgcgc cacattcgcc agctggaaaa agacgacgtc
     4981 aaactgatcg aagtcccggt tgagtacatc gcaggtaaag tggttgctaa agactatatt
     5041 gatgagtcta ccggcgagct gatctgcgca gcgaacatgg agctgagcct ggatctgctg
     5101 gctaagctga gccagtctgg tcacaagcgt atcgaaacgc tgttcaccaa cgatctggat
     5161 cacggcccat atatctctga aaccttacgt gtcgacccaa ctaacgaccg tctgagcgca
     5221 ctggtagaaa tctaccgcat gatgcgccct ggcgagccgc cgactcgtga agcagctgaa
     5281 agcctgttcg agaacctgtt cttctccgaa gaccgttatg acttgtctgc ggttggtcgt
     5341 atgaagttca accgttctct gctgcgcgaa gaaatcgaag gttccggtat cctgagcaaa
     5401 gacgacatca ttgatgttat gaaaaagctc atcgatatcc gtaacggtaa aggcgaagtc
     5461 gatgatatcg accacctcgg caaccgtcgt atccgttccg ttggcgaaat ggcggaaaac
     5521 cagttccgcg ttggcctggt acgtgtagag cgtgcggtga aagagcgtct gtctctgggc
     5581 gatctggata ccctgatgcc tcaggatatg atcaacgcca agccgatttc cgcagcagtg
     5641 aaagagttct tcggttccag ccagctgtct cagtttatgg accagaacaa cccgctgtct
     5701 gagattacgc acaaacgtcg tatctccgca ctcggcccag gcggtctgac ccgtgaacgt
     5761 gcaggcttcg aagttcgaga cgtacacccg actcactacg gtcgcgtatg tccaatcgaa
     5821 acccctgaag gtccgaacat cggtctgatc aactctctgt ccgtgtacgc acagactaac
     5881 gaatacggct tccttgagac tccgtatcgt aaagtgaccg acggtgttgt aactgacgaa
     5941 attcactacc tgtctgctat cgaagaaggc aactacgtta tcgcccaggc gaactccaac
     6001 ctggatgaag aaggccactt cgtagaagac ctggtaactt gccgtagcaa aggcgaatcc
     6061 agcttgttca gccgcgacca ggttgactac atggacgtat ccacccagca ggtggtatcc
     6121 gtcggtgcgt ccctgatccc gttcctggaa cacgatgacg ccaaccgtgc attgatgggt
     6181 gcgaacatgc aacgtcaggc cgttccgact ctgcgcgctg ataagccgct ggttggtact
     6241 ggtatggaac gtgctgttgc cgttgactcc ggtgtaactg cggtagctaa acgtggtggt
     6301 gtcgttcagt acgtggatgc ttcccgtatc gttatcaaag ttaacgaaga cgagatgtat
     6361 ccgggtgaag caggtatcga catctacaac ctgaccaaat acacccgttc taaccagaac
     6421 acctgtatca accagatgcc gtgtgtgtct ctgggtgaac cggttgaacg tggcgacgtg
     6481 ctggcagacg gtccgtccac cgacctcggt gaactggcgc ttggtcagaa catgcgcgta
     6541 gcgttcatgc cgtggaatgg ttacaacttc gaagactcca tcctcgtatc cgagcgtgtt
     6601 gttcaggaag accgtttcac caccatccac attcaggaac tggcgtgtgt gtcccgtgac
     6661 accaagctgg ggccggaaga gatcaccgct gacatcccga acgtgggtga agctgcgctc
     6721 tccaaactgg atgaatccgg tatcgtttac attggtgcgg aagtgaccgg tggcgacatt
     6781 ctggttggta aggtaacgcc gaaaggtgaa actcagctga ccccagaaga aaaactgctg
     6841 cgtgcgatct tcggtgagaa agcctctgac gttaaagact cttctctgcg cgtaccaaac
     6901 ggtgtatccg gtacggttat cgacgttcag gtctttactc gcgatggcgt agaaaaagac
     6961 aaacgtgcgc tggaaatcga agaaatgcag ctcaaacagg cgaagaaaga cctgtctgaa
     7021 gaactgcaga tcctcgaagc gggtctgttc agccgtatcc gtgctgtgct ggtagccggt
     7081 ggcgttgaag ctgagaagct cgacaaactg ccgcgcgatc gctggctgga gctgggcctg
     7141 acagacgaag agaaacaaaa tcagctggaa cagctggctg agcagtatga cgaactgaaa
     7201 cacgagttcg agaagaaact cgaagcgaaa cgccgcaaaa tcacccaggg cgacgatctg
     7261 gcaccgggcg tgctgaagat tgttaaggta tatctggcgg ttaaacgccg tatccagcct
     7321 ggtgacaaga tggcaggtcg tcacggtaac aagggtgtaa tttctaagat caacccgatc
     7381 gaagatatgc cttacgatga aaacggtacg ccggtagaca tcgtactgaa cccgctgggc
     7441 gtaccgtctc gtatgaacat cggtcagatc ctcgaaaccc acctgggtat ggctgcgaaa
     7501 ggtatcggcg acaagatcaa cgccatgctg aaacagcagc aagaagtcgc gaaactgcgc
     7561 gaattcatcc agcgtgcgta cgatctgggc gctgacgttc gtcagaaagt tgacctgagt
     7621 accttcagcg atgaagaagt tatgcgtctg gctgaaaacc tgcgcaaagg tatgccaatc
     7681 gcaacgccgg tgttcgacgg tgcgaaagaa gcagaaatta aagagctgct gaaacttggc
     7741 gacctgccga cttccggtca gatccgcctg tacgatggtc gcactggtga acagttcgag
     7801 cgtccggtaa ccgttggtta catgtacatg ctgaaactga accacctggt cgacgacaag
     7861 atgcacgcgc gttccaccgg ttcttacagc ctggttactc agcagccgct gggtggtaag
     7921 gcacagttcg gtggtcagcg tttcggggag atggaagtgt gggcgctgga agcatacggc
     7981 gcagcataca ccctgcagga aatgctcacc gttaagtctg atgacgtgaa cggtcgtacc
     8041 aagatgtata aaaacatcgt ggacggcaac catcagatgg agccgggcat gccagaatcc
     8101 ttcaacgtat tgttgaaaga gattcgttcg ctgggtatca acatcgaact ggaagacgag
     8161 taattctcgc tcaaacaggt cactgctgtc gggttaaaac ccggcagcgg attgtgctaa
     8221 ctccgacggg agcaaatccg tgaaagattt attaaagttt ctgaaagcgc agactaaaac
     8281 cgaagagttt gatgcgatca aaattgctct ggcttcgcca gacatgatcc gttcatggtc
     8341 tttcggtgaa gttaaaaagc cggaaaccat caactaccgt acgttcaaac cagaacgtga
     8401 cggccttttc tgcgcccgta tctttgggcc ggtaaaagat tacgagtgcc tgtgcggtaa
     8461 gtacaagcgc ctgaaacacc gtggcgtcat ctgtgagaag tgcggcgttg aagtgaccca
     8521 gactaaagta cgccgtgagc gtatgggcca catcgaactg gcttccccga ctgcgcacat
     8581 ctggttcctg aaatcgctgc cgtcccgtat cggtctgctg ctcgatatgc cgctgcgcga
     8641 tatcgaacgc gtactgtact ttgaatccta tgtggttatc gaaggcggta tgaccaacct
     8701 ggaacgtcag cagatcctga ctgaagagca gtatctggac gcgctggaag agttcggtga
     8761 cgaattcgac gcgaagatgg gggcggaagc aatccaggct ctgctgaaga gcatggatct
     8821 ggagcaagag tgcgaacagc tgcgtgaaga gctgaacgaa accaactccg aaaccaagcg
     8881 taaaaagctg accaagcgta tcaaactgct ggaagcgttc gttcagtctg gtaacaaacc
     8941 agagtggatg atcctgaccg ttctgccggt actgccgcca gatctgcgtc cgctggttcc
     9001 gctggatggt ggtcgtttcg cgacttctga cctgaacgat ctgtatcgtc gcgtcattaa
     9061 ccgtaacaac cgtctgaaac gtctgctgga tctggctgcg ccggacatca tcgtacgtaa
     9121 cgaaaaacgt atgctgcagg aagcggtaga cgccctgctg gataacggtc gtcgcggtcg
     9181 tgcgatcacc ggttctaaca agcgtcctct gaaatctttg gccgacatga tcaaaggtaa
     9241 acagggtcgt ttccgtcaga acctgctcgg taagcgtgtt gactactccg gtcgttctgt
     9301 aatcaccgta ggtccatacc tgcgtctgca tcagtgcggt ctgccgaaga aaatggcgct
     9361 ggagctgttc aaaccgttca tctacggcaa gctggaactg cgtggtcttg ctaccaccat
     9421 taaagctgcg aagaaaatgg ttgagcgcga agaagctgtc gtttgggata tcctggacga
     9481 agttatccgc gaacacccgg tactgctgaa ccgtgcaccg actctgcacc gtctgggtat
     9541 ccaggcattt gaaccggtac tgatcgaagg taaagctatc cagctgcacc cgctggtttg
     9601 tgcggcatat aacgccgact tcgatggtga ccagatggct gttcacgtac cgctgacgct
     9661 ggaagcccag ctggaagcgc gtgcgctgat gatgtctacc aacaacatcc tgtccccggc
     9721 gaacggcgaa ccaatcatcg ttccgtctca ggacgttgtt ctgggtctgt actatatgac
     9781 ccgtgactgt gttaacgcca aaggcgaagg catggtgctg actggcccga aagaagcaga
     9841 acgtctgtat cgctctggtc tggcttctct gcatgcgcgc gttaaagtgc gtatcaccga
     9901 gtatgaaaaa gatgctaacg gtgaattagt agcgaaaacc agcctgaaag acacgactgt
     9961 tggccgtgcc attctgtgga tgattgtacc gaaaggtctg ccttactcca tcgtcaacca
    10021 ggcgctgggt aaaaaagcaa tctccaaaat gctgaatacc tgctaccgca ttctcggtct
    10081 gaaaccgacc gttatttttg cggaccagat catgtacacc ggcttcgcct atgcagcgcg
    10141 ttctggtgca tctgttggta tcgatgacat ggtcatcccg gagaagaaac acgaaatcat
    10201 ctccgaggca gaagcagaag ttgctgaaat tcaggagcag ttccagtctg gtctggtaac
    10261 tgcgggcgaa cgctacaaca aagttatcga tatctgggct gcggcgaacg atcgtgtatc
    10321 caaagcgatg atggataacc tgcaaactga aaccgtgatt aaccgtgacg gtcaggaaga
    10381 gaagcaggtt tccttcaaca gcatctacat gatggccgac tccggtgcgc gtggttctgc
    10441 ggcacagatt cgtcagcttg ctggtatgcg tggtctgatg gcgaagccgg atggctccat
    10501 catcgaaacg ccaatcaccg cgaacttccg tgaaggtctg aacgtactcc agtacttcat
    10561 ctccacccac ggtgctcgta aaggtctggc ggataccgca ctgaaaactg cgaactccgg
    10621 ttacctgact cgtcgtctgg ttgacgtggc gcaggacctg gtggttaccg aagacgattg
    10681 tggtacccat gaaggtatca tgatgactcc ggttatcgag ggtggtgacg ttaaagagcc
    10741 gctgcgcgat cgcgtactgg gtcgtgtaac tgctgaagac gttctgaagc cgggtactgc
    10801 tgatatcctc gttccgcgca acacgctgct gcacgaacag tggtgtgacc tgctggaaga
    10861 gaactctgtc gacgcggtaa aagtacgttc tgttgtatct tgtgacaccg actttggtgt
    10921 atgtgcgcac tgctacggtc gtgacctggc gcgtggccac atcatcaaca aaggtgaagc
    10981 aatcggtgtt atcgcggcac agtccatcgg tgaaccgggt acacagctga ccatgcgtac
    11041 gttccacatc ggtggtgcgg catctcgtgc ggctgctgaa tccagcatcc aggtgaaaaa
    11101 caaaggtagc atcaagctca gcaacgtgaa gtcggttgtg aactccagcg gtaaactggt
    11161 tatcacttcc cgtaatactg aactgaaact gatcgacgaa ttcggtcgta ccaaagaaag
    11221 ctataaagta ccttacggtg cggtactggc gaaaggcgat ggcgaacagg ttgctggcgg
    11281 cgaaaccgtt gcaaactggg acccgcacac catgccggtt atcaccgaag taagcggttt
    11341 tgtacgcttt actgacatga tcgacggtca gaccattact cgtcagacag acgaattgac
    11401 cggtctgtct tcgctggtgg ttctggattc cgcagaacgt acagcaggtg gtaaagatct
    11461 gcgtccggca ctgaaaatcg ttgatgctca gggtaacgac gttctgatcc caggtaccga
    11521 tatgcctgcg cagtacttcc tgccgggtaa agcgattgtt cagctggaag atggcgtaca
    11581 gatcagctct ggtgacaccc tggcgcgtat tccgcaggaa tccggcggta ccaaggacat
    11641 caccggtggt ctgccgcgcg ttgcggacct gttcgaagca cgtcgtccga aagagccggc
    11701 aatcctggct gaaatcagcg gtatcgtttc cttcggtaaa gaaaccaaag gtaaacgtcg
    11761 tctggttatc accccggtag acggtagcga tccgtacgaa gagatgattc cgaaatggcg
    11821 tcagctcaac gtgttcgaag gtgaacgtgt agaacgtggt gacgtaattt ccgacggtcc
    11881 ggaagcgccg cacgacattc tgcgtctgcg tggtgttcat gctgtgactc gttacatcgt
    11941 taacgaagta caggacgtat accgtctgca gggcgttaag attaacgata aacacatcga
    12001 agttatcgtt cgtcagatgc tgcgtaaagc taccatcgtt aacgcgggca gctccgactt
    12061 cctggaaggc gaacaggttg aatactctcg cgtcaagatc gcaaaccgcg aactggaagc
    12121 gaacggcaaa gtgggtgcaa cttactcccg cgatctgctg ggtatcacca aagcgtctct
    12181 ggcaaccgag tccttcatct ccgcggcatc gttccaggag accactcgcg tgctgaccga
    12241 agcagccgtt gcgggcaaac gcgacgaact gcgcggcctg aaagagaacg ttatcgtggg
    12301 tcgtctgatc ccggcaggta ccggttacgc gtaccaccag gatcgtatgc gtcgccgtgc
    12361 tgcgggtgaa gctccggctg caccgcaggt gactgcagaa gacgcatctg ccagcctggc
    12421 agaactgctg aacgcaggtc tgggcggttc tgataacgag taatcgttaa tccgcaaata
    12481 acgtaaaaac ccgcttcggc gggttttttt atgggtgtta ttcagagggc aaattcttca
    12541 cggaattttt aagaaaggca gggcgaaacg aggaagaagc ttttcgccct ggacaacatt
    12601 cctgctgacg gaactaccat aaaaaaacag aacgctttca acaaccttgc gtttttcatc
    12661 ttccgtagcg gctcggaata aatttacgtt gttacattct gtctcatggc ctttgcgagg
    12721 cgtgtcccag atagctgtcc cagtctttcc ataccggctg caaaccctga gcggttaacg
    12781 cggccgcaac tgcttctggt ctgcgatcgt cgtgcggtga gaactgttcc agctcggggt
    12841 gattgtcggc atagccacct ggctgcgttt tcgaaaaagc gctgacgtta ttaattgcca
    12901 gcggaatcac gcgatcgcga aaccacggtg attcccgcgt ggagagtgac agttcaatct
    12961 ccggtgcaag cagtcggaag gcgcagatgg tttgcactaa ctggcgttca tccataatcg
    13021 acgcaggctc aatgccgcca gtacacgggc gcaggcgcgg aaaggagaca gagtaacggc
    13081 tttgccagta atgctgttgc agccatagca aatgttcggc aaccatatag cagtcaacgc
    13141 gccagttgtc ggaaaggcca attagcgcgc cgaggcctat cttatcaatc cccgcacgcc
    13201 ccagccgatc cggcgtttcc agccgccaga agaagtcctg tttttttcct ttcagatgat
    13261 ggcgggcata agtcgcctcg tgatatgtct cctgataaac catcacgcca tccagaccaa
    13321 gctgctttaa ctcggcgtat tccgtctccg ccagcggttg cacttccatt tgtagtgaag
    13381 agaactgttc acgcagggcg gggagatgac gacgaaagta atccatcccc actttcgcct
    13441 gatgttcacc agtgactaat agcagatgtt caaagcccat ctcccgtata gcggcgcttt
    13501 ccctggcaat atccgcttca tccagcgttt tgcgcttgat gcgattactc atggaaaatc
    13561 cgcagtacgt gcagtcgtta gcgcaaagat tggaaagata aagcgggacg tagaaactaa
    13621 ctgtgttgcc aaatcgctga cgggtcagac gctgcgcccg ttgggccagt tgttccagat
    13681 agccactggc ggctggcgat aacagcgcca tcatatcgtc gcgggtgaat tgcgaggcat
    13741 ttagcgcccg ctctacgtca acagccgttt tgccgttgat acgcaggcgg atgtcatccc
    13801 agtccagttg tcgccagcga tcgctgaagg ttttcatgcc gatgcctcca gaaatccagt
    13861 cagcgggctg gtggcatgag caaaatgact gcggctgccc ggtccggact gacgtgccag
    13921 caggcctgct tctaccgcca gacgaaatgc cttcgccatg ttgacgggat cgtccgctac
    13981 ggcaatcgcc gtattcacta acaccgcgtc ggcccccatt tccagggcct gcgcggcatg
    14041 gctgggaacg ccgatgccag catcgacaac caccggaact gtggcctgct ggataataat
    14101 ctccagcatg gcacgggttt ccagtccctg attcgagcca atcggcgcgc cgagcggcat
    14161 caccgctgca cagccgactt cttccagacg tttacacaat accggatcgg ccccgcagta
    14221 aggcagcacg acaaatccct gttgtaccag catttcggcg gctttcagag tttcgatggg
    14281 atcgggcaac agccagcggg cgtcagggtg aatctctaat tttaaccagt ttgtgcctaa
    14341 cgcttcacgt gccagatggg cggcgaaaat ggcttcttcc gctgttttcg ccccggaagt
    14401 atttggcagc agggtcacac ccgccgcgat aagcggttcg aggatagcgt cgttgtgctg
    14461 gcgcaagtcg acacgtttca tcgccagtgt caccagctgg ctgccggaag cgcggatcgc
    14521 ctccaccatc agttgtgaag aagcgaattt ccctgtgccg gtaaacagat gtgaatcaaa
    14581 cgttttgtcc gcaatacgta acatctcaac cccctgcaat aacctgaaaa agcaggatct
    14641 ggtcgccatc ctgcacgata tgttgcgtcc actgctcacg cgggacgatt tgctgattaa
    14701 tcgccagagc cgcgcccgct tgtcgttggt cgagttgctc cagtagttcg tgaacagttt
    14761 gcccggcggc gcactgcatc ggttgatcgt taaacaggat ctgcattgct tcctccgcat
    14821 accgggcaac cactggcgcg gcgcaacgcc aggctgcgcc actggctaga cttaccatcg
    14881 aacagtcgga gttctcccgc aggcgtctct ataccgctta ataacttaat ggcttccagt
    14941 gcctgcaaag tgcccatcac cccgaccacc gggccaacca cgcccgccgt gcggcagttg
    15001 cgttctggct cctggttatc tggccacagg cagcggtaac acccctgctc ccagggcggc
    15061 gtcagtacca tcaactgacc gccaaatccg accgcgctgg cggtgataag cggcgtgttg
    15121 agtaccacgc aggcggcatt aatctcctgg cgagtcgcca tattgtcggt acagtcgagc
    15181 accacatcgg cccgtgcaac cgcatctttt aacgcctcac ccgttaaccg ttgttgtaat
    15241 gctgtcagtt gaatgtcggg attcaactgt gtcagtcgct gttggctgac ctgcgatttc
    15301 gggcgatcga tatcttcagt ggtaaagagg atttgtcgtt gcagattgct taaatgcaca
    15361 tcgtcgtcat ctgccagtac cagcgtcccg acgccagcgc ccgccaggta tagcgcagca
    15421 ggtgtaccca gcccgccaag accgataatc agcacctggc tgtcgagcag tttttgctgc
    15481 ccgtcaagag cgatatcgtc gagcaggatt tggcggctat aacgcataaa atcacggtca
    15541 ttcatcgcca actcctgcaa tttccagcaa ctgtgccgtt gccaaacgcc agtctgcggc
    15601 ttgagtaatg gcgctgacga cggcgatact gccgacaccc gttgctatca ccgcaggcgc
    15661 gcgtgccaga ctgacaccgc caatcgccac ggtgggataa tccgccagtc gctcaacatg
    15721 ccgtgccagc tgttccagcc cctgcggtgc agaaggcatc tgtttggttt gcgtcgggaa
    15781 cacatgtccc agcgcgatat aagaggggcg tgctgccagc gcgacgtcga tttccatatc
    15841 gtcatgtgtc gaaacaccca gccgcaggcc tgccgcgcgg atggcattga gatcggtggc
    15901 ttgcaaatct tcctgcccca aatggacgcc atacgcctga tgcttgatcg cgagccgcca
    15961 gtaatcgttg ataaacaatc gcgcgttata gcggcggccc agcgcaattg ccgccacgac
    16021 atcggcttcc acctcttcat cgcgccgatc tttgatgcgt agctggagag tacgtacgcc
    16081 tgcatccaac agacgttcga tccactgtac gctgtccacc actgggtaca gtcctaaacg
    16141 aaaaggtaca ggaggaaaat caggctgata catcacgctt cctccttacg caggtagatt
    16201 tctccgcctc tggcacggaa gttctccgac atatccgcca ttcccatttc aatagtttgc
    16261 gtggcggcgt aatcacgcac ttcctggctg attttcatcg agcagaattt cggcccacac
    16321 atggagcaaa aatgggcgac tttacctgac tcttgcggca gggtttcatc gtgataagcg
    16381 cgggcggtaa acgggtcgag ggccagatta aactggtctt cccagcgaaa ttcgaagcgg
    16441 gctttcgaca tggcgttatc gcgaatttgc gcgcccggat gccctttcgc caggtcagcg
    16501 gcgtgggcgg caatcttata ggtgataagc ccctgcttaa catcttcttt attgggcaga
    16561 cccagatgct cttttggcgt tacgtaacag agcatcgcgc agccaaacca gccaatcatc
    16621 gccgcaccaa tccccgacgt gaagtggtca tagcccggcg caatatcggt agttagcggc
    16681 cccagagtgt aaaacggcgc ttcgtggcag tgctctaact cctcggtcat attgcggcgg
    16741 atcatctgca tcggcacgtg gcctgggcct tcaatcatca cctgcacgtc atattcccag
    16801 gcaattttgg tcagttcgcc cagcgtatgc agctcggcaa actgcgcttc atcgttggcg
    16861 tcctgaatag aaccggggcg cagaccgtcg cccagcgaca gcgaaacgtc ataagcggca
    16921 cagatttcac aaatttcgcg gaagtgttga tagaggaaat tttcctgatg atgggagagg
    16981 caccatttcg ccataatcga accgccgcga gagacgatac cggtcaggcg ttttgcggtc
    17041 atcggcacat agcgcagcag tacgcccgca tggatagtga agtaatccac accttgctcg
    17101 gcctgttcca gcagcgtgtc gcggaacgct tcccaggtaa gatcttcggc gatcccgtta
    17161 accttctcca gcgcctggta gatcggcact gtaccgatcg gcaccgggct gttacgcaaa
    17221 atccactcgc gggtttcgtg aatatagcga ccggtggaga gatccatcac cgtatccgct
    17281 ccccagcgcg tggaccatac cagcttttcc acttcttctt cgatggaaga ggtgaccgcc
    17341 gagttgccga tattggcgtt aacttttacc aggaagttac ggccaataat catcggctcc
    17401 gattccggat gattaatgtt ggccgggata atcgcacgtc cggcagcaac ttcatcacgg
    17461 acaaattccg cagtgatatt ttccggcaga cgtgcgccaa agctcattcc cggatgctgg
    17521 tggcgtaaaa cttcgctacg tatgcgctcg cggcccatat tctcgcggat ggcgatgaat
    17581 tccatttccg gcgtgatgat gccctggcgg gcgtagtgca gttgggtgac acggcgtcct
    17641 gctttggcgc gttttggtgt tagtacgccg ctaaaacgca gttcgtcgag gccatcatct
    17701 gccagccgcg ctttagtgta atcggaactg cgcacggtaa gttcttcggt atcgccgcgc
    17761 gcatcgatcc acggctggcg tagttttgcc agcccttgct gcacgttaat ggcaatctgc
    17821 ggatcaccat acgggccgga ggtgtcgtag accggaatcg cttcgttttc ttcgtactgc
    17881 ggctgttctt tgctaccgcc aattagcgtc gggctaagct ggatctcacg catcggcacg
    17941 cgcacgccgg ggtgtgtgcc agtgatataa atgcgttttg agttgggaaa ggcggtgcct
    18001 tccagggtgt cgataaaatg ttgggcccgg gcgcgttgtt cgcggcgggt cagttttgtt
    18061 gcagacatag ctcattccaa aaagttaagg acgtggcttg tcagacgacg gatgaagcaa
    18121 gagacgatcg ccgcaggggc gatgcgatag cagattaact cttgttccct tcgcaggtat
    18181 tagcctgatc aggttccgcg gatcccgaat aaacggtctc agccagttaa ggcactccga
    18241 caagaaatta gccccgcaaa tggggcattg aatgtaaatt acgcgttaac agcgcagaac
    18301 tcaagcagga tgtttgacgc gggcggcgtc aagcaccagc agaatcagct tatcttccag
    18361 cacaaagcgc gcttccagcg cctcgccgat gtcagataaa acctgttgaa actcaaggta
    18421 attatcatga tcgatggcgg tttccagact ggaatcgtag taatccataa tctgttgagt
    18481 attggcttcg agttgcggcc aaatcttcgc ggcgcgcgcg agttgcccgt tgccttccag
    18541 cttatgaaga atgcgctcat aaatactgaa atgtccggca gacaagtaat cgaccaggct
    18601 ctgacaaaaa tcatcaaggg ctttttcgtt tagcctcatg tacgattctt tgccaggctt
    18661 aatgccaacc agattgtagt aagccacgag cagatgctta cgtacatgta gccagcgatc
    18721 aaccagtttg ttacttcctc tgacgcgctc cgtcaggtta tcgagctggt taagcatgat
    18781 tgactccgca agtttgtatt caaaaactgc tcagtgagaa atgtaaaaac catgttaaac
    18841 atgccagtga tgcaaaggta gtgcaagagc tatggatcgt ataattgaaa aattagatca
    18901 cggctggtgg gtcgtcagcc atgaacaaaa attatggttg ccgaagggag aattgccata
    18961 tggcgaagcg gcaaatttcg atcttgtggg tcagcgcgca ctacaaatcg gcgaatggca
    19021 gggggaacct gtttggttag tacaacagca gcggcgtcac gatatggggt cggtacgtca
    19081 ggtcattgat ctcgatgttg ggctgtttca actggccgga cgaggcgtac aactggcgga
    19141 gttttaccga tcgcataaat actgtggtta ctgcgggcat gaaatgtatc cgagcaaaac
    19201 cgaatgggcg atgctgtgca gccattgccg tgagcgttac tacccgcaaa tcgccccctg
    19261 cattattgtt gccatccgtc gcgatgattc gatcctcctc gcccagcata cccgccatcg
    19321 taacggtgtc catacggtac ttgccggatt cgtcgaagtg ggcgaaaccc tcgagcaggc
    19381 ggtcgcgcgg gaagtgatgg aagagagcgg aattaaagtt aaaaacttgc gttatgtgac
    19441 ttcccagccg tggccgtttc ctcagtcttt aatgaccgcg tttatggcgg aatatgacag
    19501 cggcgacatc gtgatcgacc cgaaagaatt gcttgaggcg aactggtatc gctatgacga
    19561 tttgccgtta ctcccgccgc ccggcaccgt agcgcgccgt ctgatagaag atactgtggc
    19621 gatgtgtcgg gcagagtatg agtgatgata cactgaccgc ctgacgcact aaggaacagc
    19681 caaaatgacc gaacttaaaa acgatcgtta tctgcgggcg ctgctgcgcc agcccgttga
    19741 tgtcactcca gtatggatga tgcgccaggc gggtcgctat ctaccggaat ataaagccac
    19801 gcgcgcccag gcgggcgatt ttatgtcgct gtgcaaaaac gccgagctgg cgtgcgaagt
    19861 gactttgcaa ccgctgcgtc gctacccgct ggatgcggcg atcctctttt ccgatatcct
    19921 caccgtgccg gacgcgatgg ggttagggct ctattttgaa gccggagaag gtccgcgttt
    19981 tacctcgcca gtcacctgca aagccgacgt cgataaactg ccaattccgg acccggaaga
    20041 tgagctgggt tacgtgatga acgcggtgcg taccattcgt cgcgaactga aaggcgaagt
    20101 gccgctgatt ggtttttccg gcagcccgtg gacgctggcg acctacatgg tggaaggcgg
    20161 cagcagcaaa gccttcaccg tgatcaaaaa aatgatgtat gccgatccgc aggcgctgca
    20221 cgctctactc gataaactgg cgaaaagcgt cactttgtat ctgaatgcgc agattaaagc
    20281 cggtgctcag gctgtgatga ttttcgacac ctggggcggc gtgcttaccg ggcgcgatta
    20341 tcaacagttc tcgctttatt acatgcataa aattgttgat ggtttactgc gtgaaaacga
    20401 cggtcgccgc gtaccggtca cgctgtttac caaaggcggc ggacagtggc tggaagccat
    20461 ggcagaaacc ggttgcgatg cgctgggcct cgactggaca acggacatcg ccgatgcgcg
    20521 ccgccgtgtg ggcaataaag tcgcgttgca gggtaatatg gatccgtcga tgctgtacgc
    20581 gccgcctgcc cgcattgaag aagaagtagc gactatactt gcaggtttcg gtcacggcga
    20641 aggtcatgtc tttaaccttg gtcacggcat tcatcaggat gtgccgccag aacatgctgg
    20701 cgtgttcgtg gaggcagtgc atcgactgtc tgaacagtat caccgctaag gagtgattat
    20761 ggatctcgcg tcattacgcg ctcaacaaat cgaactggct tcttctgtga tccgcgagga
    20821 tcgactcgat aaagatccac cggatctgat cgccggagcc gatgtcgggt ttgagcaggg
    20881 cggagaagtg acgcgagcgg cgatggtgct gctgaaatat ccctcgcttg agctggtgga
    20941 gtataaagtt gcccgcatcg ccaccaccat gccttacatt ccaggttttc tttccttccg
    21001 cgaatatcct gcgctgctgg cagcgtggga gatgctgtcg caaaagccgg atttagtgtt
    21061 tgtcgatggt catgggatct cgcatcctcg ccgtcttggc gtcgccagcc attttggctt
    21121 attggtggat gtgccgacca ttggcgtggc gaaaaaacgg ctctgcggta aattcgaacc
    21181 gctctccagc gaaccgggcg cgctggcccc actgatggat aaaggcgagc agctggcctg
    21241 ggtctggcgc agcaaagcgc gctgtaaccc gttgtttatc gctaccggcc atcgggtcag
    21301 cgtggacagc gcgctggcgt gggtacaacg ctgcatgaaa ggctatcgtc tgccggagcc
    21361 aacgcgctgg gcggacgcgg tggcctcgga acgtccggcg ttcgtgcgct atacagcaaa
    21421 tcagccctaa ttcaggtaaa ctgcgggtaa tttccgtatt tgagaactca acatgttaca
    21481 aaacccaatt catttgcgtc tggagcgcct ggaaagctgg cagcacgtca ctttcatggc
    21541 ttgcttatgc gaacgcatgt accccaatta cgccatgttt tgccagcaaa ccggttttgg
    21601 tgatgggcaa atttaccgtc gtattctcga tctcatctgg gaaacgctga ccgttaaaga
    21661 cgcaaaagta aatttcgaca gccaactgga gaaatttgaa gaagcgattc cttcagccga
    21721 cgatttcgat ctgtacggcg tttatccggc aatcgatgcc tgcgtggcgt taagtgaact
    21781 ggtccattcg cgtttgagtg gtgaaacgct cgaacacgcg gtggaagtga gtaagacctc
    21841 catcacgacc gttgcgatgc tggaaatgac tcaggctggt cgtgaaatga gcgatgaaga
    21901 gcttaaagaa aacccagctg tagagcaaga atgggacatt cagtgggaaa tattccgact
    21961 tttagctgag tgcgaagaac gcgatatcga gctgataaaa ggccttaggg cagacctgcg
    22021 tgaggcgggt gagagcaata ttggtataat ttttcagcaa taagaccaga aaacgtgatt
    22081 taacgcctga tttgtcgtac ctggagtctt ccctttcgcc ccccgtctgg tctacatttg
    22141 gggggcgaaa aaaagtggct atcggtgcgt gtatgcagga gagtgctatt ctggcatttc
    22201 cgtcgcactc gatgcttagc aagcgataaa cacattgtaa ggataactta tgaacaagac
    22261 tcaactgatt gatgtaattg cagagaaagc agaactgtcc aaaacccagg ctaaagctgc
    22321 tctggagtcc actctggctg caattactga gtctctgaaa gaaggcgatg ctgtacaact
    22381 ggttggtttc ggtaccttca aagtgaacca ccgcgctgag cgtactggcc gcaacccgca
    22441 gaccggtaaa gaaatcaaaa ttgccgcagc taacgtaccg gcatttgttt ctggcaaggc
    22501 actgaaagac gcagttaagt aagattgcgt ggcagtgaac agttttaacg aaggggtggt
    22561 ttcacccctt ttgtctttct ggcgtcgatc attgatgctg gcaggcgctc tgtttctcac
    22621 tgcctgtagt cacaactctt cacttcctcc ctttaccgcc agtggatttg ctgaagacca
    22681 gggcgcggta cgcatctggc gaaaagacag cggcgataat gtgcatctgc ttgccgtgtt
    22741 tagcccgtgg cgcagtggcg ataccacgac gcgagagtat cgctggcagg gcgataacct
    22801 cacgctcatc aatatcaatg tttacagcaa accgccggtg aacattcgcg cgcgttttga
    22861 cgatcgcggc gatctgagct ttatgcaacg tgaatccgat ggggaaaagc agcagctttc
    22921 taacgaccaa atcgatttat accgttatcg tgctgatcag atccgccaga ttagcgatgc
    22981 cttacgtcag gggagagtcg tgctgcgcca ggggcgctgg catgcgatgg aacagaccgt
    23041 gaccacctgc gaagggcaaa ccattaaacc tgatttagat tcgcaggcga tagcgcatat
    23101 cgagcgccgc cagagccgct cttctgttga tgtcagcgtg gcatggctgg aagcgcccga
    23161 aggttcgcaa ttactgttag tggcaaactc tgatttctgt cgctggcaac ccaacgagaa
    23221 aacgttctga tttaccagtg gcccataccc atatgaccgc caccaccgca gccgccgtaa
    23281 cccatgccca ttccggtacc gcgcggaata cccgcttcag ccatcgcaat atctcgtttc
    23341 acccgtaact catctaacga ctgacgcaaa ttctccatct ctttggcgac cgcgttaatt
    23401 ttgctgctat ccggtgggtt cgcggctaac agggcattgt attcataacg cttcgtcacc
    23461 agttgctgtt gcagtgcgct gctttgagcg taaaagtcat tatggatttt ctgccacgct
    23521 gtctgttgtt cgctggtcaa aggcgcggca ttttgctgcc acataccgtg tccgccgtga
    23581 gcaaatgcag atgtcgatcc catcgccatt gctgaaagcg ccatcattac cagggcaatt
    23641 ttcgtgttcc gtttcatggt taatcctcca gtggttgtct tacttcgggt attgcatctt
    23701 ccgtgccaac gatgaaacgc tgatatgacg ggtaatctgg catgataaac gagtaaaaat
    23761 gactcgcctg ctgcgggtag cgagtcattt ttactcattg aaacttaagc ctttgtgtta
    23821 cagcgcaggg taagcgctga taaaagatgg catgatttct gctgtcagaa agggatgagc
    23881 aggcaaagaa gaagatgcgt tttatgcaac gttctaaaga ctccttagct aaatggttaa
    23941 gcgcgatcct ccccgtggtc attgttgggc tggtagggtt gtttgcggtg acggtgattc
    24001 gcgattatgg gcgcgagact gccgccgcca gacaaacgct gctggaaaaa ggcagtgtac
    24061 ttattcgcgc tcttgaatcc ggctcgcgcg tcggcatggg gatgcgcatg catcatgcgc
    24121 agcagcaggc cttactggaa gaaatggccg ggcagcctgg agtacgttgg tttgcggtca
    24181 cggatgaaca aggaacaatc gtgatgcata gcaactccgg catggtggga aaacagcttt
    24241 attccccgca ggaaatgcag cagttacatc ctggagatga agaagcgtgg cggcggatcg
    24301 atagcgcaga cggcgagcct gttctggaaa tttatcgcca gtttcaaccg atgtttgctg
    24361 ctggaatgca ccggatgcgc catatgcagc agtatgccgc aacaccacaa gcaattttca
    24421 tcgctttcga cgccagtaat attgtgagtg ccgaagatcg tgagcagaga aacaccctga
    24481 ttatcctctt cgccctggcg acggtcttgc tggcaagcgt attgtcattc ttctggtatc
    24541 gccgctatct gcgctcgcgc cagcttctac aagatgaaat gaagcgcaaa gagaagctgg
    24601 tggcgctggg gcatcttgcg gcaggcgttg cccacgaaat ccgtaaccca ctttcctcga
    24661 ttaaaggact ggcgaaatac tttgccgaac gcgcgccagc agggggagaa gcgcatcaat
    24721 tggcgcaggt gatggcgaaa gaagccgacc gtttaaaccg cgtggtaagc gagttgctgg
    24781 aactggttaa gccaacgcat ctggctttgc aggcggtgga tctcaacacg ctgattaacc
    24841 actcattaca gctggtaagc caggatgcaa acagccggga gatccagtta cgctttaccg
    24901 ccaacgacac attaccggaa attcaggccg atccggacag gctgactcag gtcctgttga
    24961 atctctatct caatgctatt caggcgattg gtcagcatgg cgtgattagc gtgacggtca
    25021 gcgaaagcgg cgcgggcgtg aaaatcagcg ttaccgacag cggtaaggga attgcggcag
    25081 atcagcttga agccatcttc actccgtact tcaccaccaa agccgaaggc accggattgg
    25141 ggctggcggt cgtgcataat attgttgaac aacacggtgg tacaattcag gtcgcaagcc
    25201 aggagggaaa aggctcaacg ttcaccctct ggcttccggt caatattacg cgtaaggacc
    25261 cacaaggatg acgcacgata atatcgatat tctggtggtg gatgatgaca ttagccactg
    25321 cactattttg caggctttac tgcgcggctg gggctataac gtcgcgctgg cgaacagcgg
    25381 gcgacaggcg ctggagcagg tgcgggaaca ggtttttgat cttgtgcttt gcgatgtgcg
    25441 aatggcggag atggacggca tcgccacgct gaaagagatc aaagcgttaa acccggcaat
    25501 tccggtgctg attatgactg cgtactccag cgtcgagacg gcggtagagg cactgaaaac
    25561 tggggcgctg gattatctca tcaagccgct ggatttcgat aacctacagg cgacgctgga
    25621 aaaggcgctc gcgcatacgc acagtattga tgctgaaaca cctgcggtga ctgccagcca
    25681 gttcggtatg gtcggtaaaa gctcggcgat gcaacacctg ctcagtgaaa tcgccctcgt
    25741 cgcgccatcg gaagccacgg tactgatcca cggcgattcc ggcaccggta aagagctggt
    25801 cgccagggcg attcacgcca gtagcgcacg tagcgaaaaa ccgctggtaa cgctcaactg
    25861 tgcggcactc aacgaatcct tgctggaatc tgaattgttc ggtcacgaaa aaggggcgtt
    25921 tactggagcc gataaacgcc gggaagggcg ctttgttgag gcggacggcg gcacgctgtt
    25981 tctcgatgaa attggcgata tctcgccgat gatgcaggtg cgtctgctgc gtgcgattca
    26041 ggagcgcgaa gttcagcgtg tcggtagcaa ccagactatc tcggttgatg tccggctgat
    26101 tgcggcgacc catcgcgatc ttgccgcaga ggtgaatgcc gggcgttttc gccaggatct
    26161 ctactatcgc ctgaatgtgg tggcgattga agtaccatcg ttgcggcaac ggcgggaaga
    26221 tatccctctg ctggctggcc attttctgca gcgctttgcc gagcgtaatc gcaaggcggt
    26281 aaaaggtttt acgccccagg cgatggatct gttgattcat tacgactggc cgggaaatat
    26341 tcgtgagctg gaaaacgcgg tggaacgggc agtggtgctg ctgaccgggg aatatatttc
    26401 cgaacgcgag ctgccgctgg cgattgccag tacgccgatc ccgctggggc aaagtcagga
    26461 tattcagccg ctggtggaag tggaaaaaga ggtgattctg gcggcactgg agaaaacggg
    26521 cggcaacaaa actgaagccg cccgtcagtt agggatcacg cgtaaaacgt tattggcaaa
    26581 actgtcgcgt tagttctgct cgcgttcgat agcacgccag ccgatatctt tccggcagaa
    26641 gcagtcgtcc cagtggatat cggtcattaa ggcataggcg cgtttctgcg cttctgccac
    26701 ggtatgaccc agcgcggtga cgcacagtac gcgtccgccg ttggttacca cctgctcgtc
    26761 atccgccagt tttgtgcccg cgtggaacac tttgccgtca gccacttctt ccagcggcag
    26821 gccgtggatc acatcgccgg tgcggtaatc gcccggatat ccacccgcag ccatcaccac
    26881 gccgagagaa gcgcgttcat cccactcgga cgttttctcg tccagcttgc cttcacaggc
    26941 cgccaggcag agctcaacca gatcggactt catgcgcagc ataatcggct gggtttccgg
    27001 atcgccaaag cggcagttaa attcaataac cttcggattg ccctgtttgt cgatcatcag
    27061 gcccgcatag agaaaaccgg tgtaggtgtt gccttccgcc gccatgcctt tcacggttgg
    27121 ccagataata cgttccatgg tgcgctgatg aacgtcatcg gttactaccg gcgcggggga
    27181 gtaagcgccc atcccgccgg tgtttggtcc ggtatcttta tcgcctacgc gtttgtgatc
    27241 ctggctggta gccatcggca gcacatgctc gccgtccacc atcacgataa agctcgcttc
    27301 ttcgccatcg aggaactctt cgataacgat gcgatgaccc gcgtcgccaa aagcgttgcc
    27361 cgccagcata tcgtgaacag ccgcttccgc ttcttccagc gtcatcgcca cgataacgcc
    27421 tttcccggca gccagaccgt ccgctttaat gacgattggc gcgcctttct cacgcagata
    27481 cgccagcgca ggttctacct cggtgaagtt ctggtattcc gccgtaggga tcttatggcg
    27541 ggccaggaaa tctttggtaa acgcttttga gccttccagt tgggccgcac ctgcggttgg
    27601 gccgaagatt ttcagcccgg cggcgcggaa ggtatcgacc acgcctttca ccagcggcgc
    27661 ttccgggccg acgatggtca gatcaatctt ttcgttttgt gcgaaatcca acagcgccgg
    27721 gatatcggtc acgccaatag caacgttttg cagcgcgggt tccagcgcag tgcctgcatt
    27781 acccggagca acaaaaacag tctcaaccag cggcgactgg gccgctttcc aggccagcgc
    27841 gtgctcgcgc ccgccgttac caatcactaa tactttcatc tattgctcca ttaatggcgg
    27901 aagtggcgca tgtcggtgaa gagcatcgca ataccgtgct cgtcggcggc ggcaatcact
    27961 tcgtcatcac ggatggaacc gccaggctgg attacgcagg tcacgcccgc agcggcggcg
    28021 gcatcaatac cgtcgcggaa cgggaagaac gcgtcagaag ccatcgagga acctttcact
    28081 tccaggcctt catcagcagc tttaataccg gcgattttcg cggagtacac gcggctcatc
    28141 tggcccgcgc caataccgat ggtcatattg tttttggcat agacgatagc attggatttc
    28201 acgaacttcg ccactttcca gcagaacagc gcatcgcgca gttcctgttc ggtcggctga
    28261 cgttgggtga cgacgcgcag ttcttccgca ccgaccatcc ccaggtcacg atcctgaacc
    28321 agcagaccgc cgttcacgcg tttgaaatca agacccggaa cacgctcgcc ccactgaccg
    28381 caggtcagaa cgcgtacgtt ctgcttggcg gcggtgattt tcagggcttc ttcgctggcg
    28441 gaaggcgcaa taatcacttc gacaaactga cgagaaatga tggcctgtgc ggtttccgca
    28501 tccagctcgc ggttaaaggc aatgatgccg ccgaatgcgg aggttgggtc ggttttgtac
    28561 gcgcgatcgt aagcatcaag aatggaattg ccgatagcta caccgcaagg gttggcgtgc
    28621 ttcacaatca cacatgccgg ctcggcgaac tctttcacgc actccagcgc cgcatcggta
    28681 tcggcgatgt tgttataaga gagggcttta ccctgaacct gggttgcggt agcaacggag
    28741 gcttctttca cattctcttc tatatagaag gcagcctgct ggtggctgtt ctcgccgtaa
    28801 cgcatatcct gcttcttaat gaagttcagg ttcagcgtgc gtgggaagcg accagcggct
    28861 tctttgcttt caccgtggta cgccggaacc atgctgccga agtagttggc aatcatgctg
    28921 tcgtaggcgg cagtgtgttc gaaggctttg atggcgaggt cgaaacgggt tgcaagcgtc
    28981 agcgatcctt cgttgtcatc catctcttta ataatggcgt cgtagtcgct gctcttcacc
    29041 acgattgcga catctttatg gttcttagcg gcggagcgca ccatggtcgg gccgccgata
    29101 tcgatgttct caaccgcatc ttccagcgag caaccttcac gggccacggt ctgggcgaac
    29161 ggatacaggt taacaaccac catatcgata ggctggatct gatgttcttc cataatggca
    29221 tcgtcctggc cgcgacggcc cagaatgcca ccatgtactt tcggatgcag ggtcttcacg
    29281 cgtccatcca tcatctccgg gaaaccggtg taatcggaaa cttcggttac cggcagacct
    29341 ttttctgcta acagacgggc agtgccccct gtagacagca gctccacacc gcgtgcggaa
    29401 agtgcctggg cgaattcgac gataccggct ttgtcagaaa cactgagcag agcgcggcgg
    29461 actggacgac gttgttgcat ggtaaatccc ctggatttga ctattacaga gagcgttagc
    29521 tgaatttttc gcgaaaaact cagctaacgc ccctaacggg gcatccttat ttttcgcccg
    29581 cattgtaacg aaaacgtttg cgcaacgctc gcgaattttt ctctttcaat ggtgatcaca
    29641 attttgacag tggttaccgt gggaaaaata cagaaattac attgatgatt gtggataact
    29701 ctgtgcgtaa aaaggtataa agcggggttt tgctggggaa tgcagcagtc agtcattttt
    29761 ctgcaatttt tctattgcgg cctgcggaga actccctata atgcgcctcc atcgacacgg
    29821 cggatgtgaa tcacttcaca caaacagccg gttcggttga agagaaaaat cctgaaattc
    29881 agggttgact ctgaaaaagg aaagcgtaat atacgccacc tcgcgacagt gagctgaaag
    29941 ccgcgtcgc
//
LOCUS       DAPGWB010000043        29843 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.043, whole genome shotgun sequence.
ACCESSION   DAPGWB010000043 DAPGWB010000000
VERSION     DAPGWB010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 29843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29843
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.043"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            215..757
                     /gene="ecpR"
                     /locus_tag="RHX79_001866"
                     /gene_synonym="matA"
     CDS             215..757
                     /gene="ecpR"
                     /locus_tag="RHX79_001866"
                     /gene_synonym="matA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECP biosynthesis operon DNA-binding
                     transcriptional regulator EcpR"
                     /protein_id="HDV2197052.1"
                     /translation="MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKD
                     FVFINLNTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAG
                     LSRDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTV
                     YTHRRNAEAKLYSKIYKLVQ"
     gene            832..1419
                     /gene="ecpA"
                     /locus_tag="RHX79_001867"
                     /gene_synonym="matB"
     CDS             832..1419
                     /gene="ecpA"
                     /locus_tag="RHX79_001867"
                     /gene_synonym="matB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="common pilus major fimbrillin subunit EcpA"
                     /protein_id="HDV2197053.1"
                     /translation="MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSK
                     LVVTPLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSG
                     STLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFTII
                     SGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS"
     gene            1477..2145
                     /gene="ecpB"
                     /locus_tag="RHX79_001868"
                     /gene_synonym="yagY"
     CDS             1477..2145
                     /gene="ecpB"
                     /locus_tag="RHX79_001868"
                     /gene_synonym="yagY"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone EcpB"
                     /protein_id="HDV2197054.1"
                     /translation="MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNS
                     TDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPAD
                     EKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLT
                     NTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKF
                     IPVK"
     gene            2171..4696
                     /gene="ecpC"
                     /locus_tag="RHX79_001869"
                     /gene_synonym="yagX"
     CDS             2171..4696
                     /gene="ecpC"
                     /locus_tag="RHX79_001869"
                     /gene_synonym="yagX"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher EcpC"
                     /protein_id="HDV2197055.1"
                     /translation="MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQ
                     AFSQALQDGMSVPLYIHLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASV
                     SEQTRQQLMALANAPFNEALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSED
                     IGQSSVNTLSSNLSYNLGVYNNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIG
                     SGQQDSELYKAMYERDFAGHRFAGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASST
                     IFDSSQSATPVIAFLPAAGEVHLTRDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEV
                     IVNGRVISKRPQRVNKLFSRGRGVGAPLAWQVWGGSFHMDRWSENGKKTRPAKESWLA
                     GASTSGSLSTLSWAATGYGYDNQAVGETRLTLPLGGAINVNLQNMLASDSSWSSIGSI
                     SATLPGGFSSLWVNQEKTRIGNQLRRSDADNRAIGGTLNLNSLWSKLGTFSISYNDDR
                     RYNSHYYTADYYQNVYSGTFGSLGLRAGIQRYNNGDSNANTGKYIALDLSLPLGNWFS
                     AGMTHQNGYTMANLSARKQFDEGTIRTVGANLSRAISGDTGDDKTLSGGAYAQFDARY
                     ASGTLNVNSAADGYINTNLTANGSVGWQGKNIAASGRTDGNAGVIFNTGLEDDGQISA
                     KINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSYDIVSGRKSHLTLYPGNVAVI
                     EPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFRYS
                     GNKTCEVALELNQARGAVWVGDVVCSGLSSWAAVTQTGEENES"
     gene            4686..6329
                     /gene="ecpD"
                     /locus_tag="RHX79_001870"
     CDS             4686..6329
                     /gene="ecpD"
                     /locus_tag="RHX79_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial adhesin EcpD"
                     /protein_id="HDV2197056.1"
                     /translation="MRVNLLITMIIFALIWPVTELRAAVSKTTWADAPAREFVFVENN
                     SDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDM
                     WLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLS
                     DAFYQYLQQMPVGSSFTMTINACQTSVNYDASSGARCKDQATGNWYVRNVTHTKAANL
                     RLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSLSGLSCKMVNYTLQTNGLSNTSI
                     HIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNF
                     FKQMVNLGISDINTKDLFNFRFQNTTSPESGWYEFSTSNTLIIKPRDFSISIISDEYT
                     QTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCVFSSDDGK
                     AKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWLTTPWTDISGEVGQMDKTTVK
                     FSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN"
     gene            6298..7008
                     /gene="ecpE"
                     /locus_tag="RHX79_001871"
     CDS             6298..7008
                     /gene="ecpE"
                     /locus_tag="RHX79_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414823.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone EcpE"
                     /protein_id="HDV2197057.1"
                     /translation="MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFV
                     SKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFY
                     YHGPRDNRERYYRVSFREVPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWS
                     FDKVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYN
                     DKFIKISDSCPAKPPSAD"
     gene            7321..7650
                     /locus_tag="RHX79_001872"
     CDS             7321..7650
                     /locus_tag="RHX79_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HDV2197058.1"
                     /translation="MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPF
                     HRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARA
                     KYGLTPL"
     gene            complement(7898..8512)
                     /locus_tag="RHX79_001873"
     CDS             complement(7898..8512)
                     /locus_tag="RHX79_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YagU family protein"
                     /protein_id="HDV2197059.1"
                     /translation="MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSP
                     VDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWV
                     GVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDL
                     PWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGSNR"
     gene            8930..9619
                     /gene="paoA"
                     /locus_tag="RHX79_001874"
     CDS             8930..9619
                     /gene="paoA"
                     /locus_tag="RHX79_001874"
                     /EC_number="1.2.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase iron-sulfur subunit"
                     /protein_id="HDV2197060.1"
                     /translation="MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPH
                     STLAASVPAATPAPEIMPLTLKVNGKTEQLEVDTRTTLLDALRENLHLIGTKKGCDHG
                     QCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGY
                     CTSGQICSSVAVLKEIQDGIPSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILA
                     AIEDAAGEIKS"
     gene            9616..10572
                     /gene="paoB"
                     /locus_tag="RHX79_001875"
     CDS             9616..10572
                     /gene="paoB"
                     /locus_tag="RHX79_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde oxidoreductase FAD-binding subunit
                     PaoB"
                     /protein_id="HDV2197061.1"
                     /translation="MKAFTYERVNTPAEAALSAQRVPGAKFIAGGTNLLDLMKLEIET
                     PTHLIDVNGLGLDKIEVTDAGGLRIGALVRNTDLAAHERVRRDYAVLSRALLAGASGQ
                     LRNQATTAGNLLQRTRCPYFYDTNQPCNKRLPGSGCAALEGFSRQHAVVGVSEACIAT
                     HPSDMAVAMRLLDAVVETITPEGKTRSITLADFYHPPGKTPHIETALLPGELIVAVTL
                     PPPLGGKHIYRKVRDRASYAFALVSVAAIIQPDGSGRVALGGVAHKPWRIEAADAQLS
                     QGAQAVYDTLFASAHPTAENTFKLLLAKRTLASVLAEARAQA"
     gene            10569..12767
                     /gene="paoC"
                     /locus_tag="RHX79_001876"
     CDS             10569..12767
                     /gene="paoC"
                     /locus_tag="RHX79_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde oxidoreductase molybdenum-binding
                     subunit PaoC"
                     /protein_id="HDV2197062.1"
                     /translation="MKFDKPAGENPIDQLKVVGRPHDRIDGPLKTTGTARYAYEWHEE
                     APNAAYGYIVGSAIAKGRLTALDTDAAQKAPGVLAVITASNAGALGKGDKNTARLLGG
                     PTIEHYHQAIALVVAETFEQARAAASLVQAHYRRNKGAYSLADEKQAVNQPPEDTPDK
                     NVGDFDGAFTSAAVKIDATYTTPDQSHMAMEPHASMAVWDGNKLTLWTSNQMIDWCRT
                     DLAKTLKVPVENVRIISPYIGGGFGGKLFLRSDALLAALAARAVKRPVKVMLPRPSIP
                     NNTTHRPATLQHLRIGADQSGKITAISHESWSGNLPGGTPETAVQQSELLYAGANRHT
                     GLRLATLDLPEGNAMRAPGEAPGLMALEIAIDELAEKAGIDPVEFRILNDTQVDPADP
                     TRCFSRRQLIECLRTGADKFGWKQRNATPGQVRDGEWLVGHGVAAGFRNNLLEKSGAR
                     VHLEQNGTVTVETDMTDIGTGSYTILAQTAAEMLGVPLEQVAVHLGDSSFPVSAGSGG
                     QWGANTSTSGVYAACMKLREMIASAVGFDPEQSQFADGKITNGTRSATLHEATAGGRL
                     TAEESIEFGTLSKEYQQSTFAGHFVEVGVHSATGEVRVRRMLAVCAAGRILNPKTARS
                     QVIGAMTMGMGAALMEELAVDDRLGYFVNHDMAGYEVPVHADIPKQEVIFLDDTDPIS
                     SPMKAKGVGELGLCGVSAAIANAVYNATGIRVRDYPITLDKLLDKLPDVV"
     gene            12777..13733
                     /gene="paoD"
                     /locus_tag="RHX79_001877"
     CDS             12777..13733
                     /gene="paoD"
                     /locus_tag="RHX79_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor insertion chaperone PaoD"
                     /protein_id="HDV2197063.1"
                     /translation="MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLV
                     TLVEIHGGAARPLGAQMVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGE
                     GSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQ
                     TRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQID
                     TDTAVILLCHDLNRELPALQAAREAKPFYLGALGSHRTHTLRLQKLHELGWSREETAQ
                     IRAPVGIFPKARDAHTLALSVLAEIASVRLHHEEDSCLPPSS"
     gene            13784..14122
                     /locus_tag="RHX79_001878"
                     /pseudo
     CDS             13784..14122
                     /locus_tag="RHX79_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014831000.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            complement(14249..14324)
                     /locus_tag="RHX79_001879"
     tRNA            complement(14249..14324)
                     /locus_tag="RHX79_001879"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14289..14291),aa:Thr,seq:cgt)
     gene            complement(14439..15692)
                     /gene="proA"
                     /locus_tag="RHX79_001880"
     CDS             complement(14439..15692)
                     /gene="proA"
                     /locus_tag="RHX79_001880"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDV2197064.1"
                     /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLGEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGSVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTRDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            complement(15704..16807)
                     /gene="proB"
                     /locus_tag="RHX79_001881"
     CDS             complement(15704..16807)
                     /gene="proB"
                     /locus_tag="RHX79_001881"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDV2197065.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            17095..18150
                     /gene="phoE"
                     /locus_tag="RHX79_001882"
     CDS             17095..18150
                     /gene="phoE"
                     /locus_tag="RHX79_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HDV2197066.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAVGMTYQF"
     gene            complement(18189..18590)
                     /gene="crl"
                     /locus_tag="RHX79_001883"
     CDS             complement(18189..18590)
                     /gene="crl"
                     /locus_tag="RHX79_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HDV2197067.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(18648..19892)
                     /gene="frsA"
                     /locus_tag="RHX79_001884"
     CDS             complement(18648..19892)
                     /gene="frsA"
                     /locus_tag="RHX79_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HDV2197068.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITGWIEKRLC"
     gene            complement(19984..20442)
                     /gene="gpt"
                     /locus_tag="RHX79_001885"
     CDS             complement(19984..20442)
                     /gene="gpt"
                     /locus_tag="RHX79_001885"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDV2197069.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            20703..22160
                     /gene="pepD"
                     /locus_tag="RHX79_001886"
     CDS             20703..22160
                     /gene="pepD"
                     /locus_tag="RHX79_001886"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HDV2197070.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            complement(22217..22831)
                     /locus_tag="RHX79_001887"
     CDS             complement(22217..22831)
                     /locus_tag="RHX79_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HDV2197071.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GHYSDTLRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(22828..23967)
                     /locus_tag="RHX79_001888"
     CDS             complement(22828..23967)
                     /locus_tag="RHX79_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000521550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HDV2197072.1"
                     /translation="MGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVG
                     MPDLHPGRGYPIGAAFFSVGRFYPALVGNDIGCGMALWQTDILTRKYNADKFEKRLSD
                     LDDVAEESWLEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDA
                     QHLQLLVHSGSRGVGQSILQRHIASFSHHGLPQGSDDALRYIAEHDDALAFACINRQM
                     IALRIMQQVKATGSPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDY
                     SWIVQPVANEKTLHSLAHGAGRKWGRTECKGRLAAKYTATQLSRTELGSRVICRDKQL
                     IFEEAPQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGKKG"
     gene            complement(24213..24665)
                     /locus_tag="RHX79_001889"
     CDS             complement(24213..24665)
                     /locus_tag="RHX79_001889"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV2197073.1"
                     /translation="MNNIQIRDYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQI
                     DESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDMLFVDPEYTRRGVASALLKPLIK
                     SESELTVDASITAKPFFERYGFQTVKQQRVECRGEWFINFYMRYKQQH"
     gene            complement(24662..25717)
                     /gene="dinB"
                     /locus_tag="RHX79_001890"
     CDS             complement(24662..25717)
                     /gene="dinB"
                     /locus_tag="RHX79_001890"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDV2197074.1"
                     /translation="MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTA
                     NYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSL
                     DEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNG
                     QFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKF
                     GRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAK
                     VKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGL
                     HVTLLDPQMERQLVLGL"
     gene            complement(25788..26573)
                     /gene="lafU"
                     /locus_tag="RHX79_001891"
     CDS             complement(25788..26573)
                     /gene="lafU"
                     /locus_tag="RHX79_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706230.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lateral flagellar export/assembly
                     protein LafU"
                     /protein_id="HDV2197075.1"
                     /translation="MTTIKLIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSH
                     PPKPATVAVPEETEKKARDVNEKTVLLKKKSATELGELATSINTIARDAHMEANLEME
                     IVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLLVELAPVFDSLDNKIIITGHTDAMA
                     YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRI
                     EIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRTR"
     gene            26545..28257
                     /locus_tag="RHX79_001892"
                     /pseudo
     CDS             26545..28257
                     /locus_tag="RHX79_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001140831.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
     gene            28362..28640
                     /locus_tag="RHX79_001893"
     CDS             28362..28640
                     /locus_tag="RHX79_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000598761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDV2197076.1"
                     /translation="MIKVSALGSRHRKTFDDVMTEPPKSGIKWDDVVALIKAVGGTIK
                     NNNGSRRKFQIGTTKFSTHEPHPKNVMDKGAVAGLKEWFVNCVGVDYE"
     gene            28633..28989
                     /locus_tag="RHX79_001894"
     CDS             28633..28989
                     /locus_tag="RHX79_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDV2197077.1"
                     /translation="MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSI
                     EALYREGESALDEWMADCEEDGIAPFREEEEQKRLTLRVPHHIDSRLTIVARQHSISK
                     NQLIVDVLEREFSAQM"
     gene            complement(29046..29819)
                     /locus_tag="RHX79_001895"
     CDS             complement(29046..29819)
                     /locus_tag="RHX79_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308281.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDV2197078.1"
                     /translation="MHDQPLLSMSLPSIPSFVLSGLLLLCLPFSSFASATTSHITFSY
                     AARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLK
                     ASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVF
                     YAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDG
                     QFIESPRTGETIRVSQLAEPFWQDHFLGARRILTEETIL"
BASE COUNT         7352 a         7889 c         7723 g         6879 t
ORIGIN      
        1 ttcacatatt gacactcatc gggaaaaaaa cataaattta agcccaatcg aaaataatta
       61 aacttaatct cgtttaacct ttattgatat gtactacgta tcttatttac ttccggttta
      121 ctaaggaaac tgaatgcacc tgtaaaaatt acaggtttgg aaagtagtga catggcaaag
      181 tgattacagc agggactatg aggttaaaaa ccatatggaa tgtcaaaacc gttctgataa
      241 atacatctgg tctccccatg acgcctactt ctataaagga ctatctgaac tgattgtgga
      301 tatcgacaga ttaatttatc tatcgttgga gaaaattaga aaagatttcg tgtttatcaa
      361 tctcaatacg gattctttat ctgaatttat aaaccgtgat aatgaatggt tatccgcggt
      421 aaaggggaaa caggtcgtat tgattgcggc cagaaagtca gaagccttag caaattattg
      481 gtattacaat agcaatatta ggggcgtggt atacgctgga ctgagtcgtg atattagaaa
      541 agaactggcc tatgtgatta atggcaggtt cctgagaaaa gatattaaga aagataaaat
      601 cacggaccgg gaaatggaaa ttatccgcat gacggcccag ggaatgcaac ctaaatcgat
      661 tgccagaatt gaaaattgta gtgtgaagac agtgtatacc catcggcgta atgctgaggc
      721 caagctgtac tcaaaaatat ataagttggt tcagtaaact ccaggcaagt tagttttaaa
      781 aaatgactca ctgggacatc acgtcctcaa ttcaactcgg gaagaaatgc aatgaaaaaa
      841 aaggttctgg caatagctct ggtaacggtg tttaccggca tgggtgtggc gcaggctgct
      901 gacgtaacag ctcaggctgt agcgacctgg tcggcaacag ccaaaaaaga caccaccagt
      961 aagctggttg tgacgccact cggtagcctg gcgttccagt atgccgaagg cattaaaggt
     1021 tttaactcac agaaaggtct atttgacgtg gctatcgagg gtgactcaac ggctaccgcc
     1081 tttaaactga cctcacgtct tatcaccaac acattaaccc agttggatac ctcaggttcc
     1141 acactgaatg tgggcgtgga ttataacggc gcggcagtcg aaaaaactgg cgataccgtg
     1201 atgatcgata ccgccaacgg cgtactgggc ggcaacctta gcccgctggc taacggttac
     1261 aatgccagca atcgtaccac cgcacaggat ggtttcacct tcaccatcat cagcggcacc
     1321 accaatggta ccaccgcagt aaccgattac agcactctac cggaaggcat ctggagcggc
     1381 gacgttagcg tacagttcga cgcgacctgg accagttaat ctctctgatg taccagcagg
     1441 ggtagccccc ctgctttatt cctggacgga attgttatga aaaagcacct tctgcctctc
     1501 gctctgctgt tttccggaat atctccggcc caggcgctgg atgtcggcga tatatcatcg
     1561 tttatgaaca gtgacagcag cacgctgagc aaaacgatca aaaacagtac cgacagtggt
     1621 cgccttatca atatccgtct cgaacggctc tcttcaccgc ttgacgacgg gcaggttatc
     1681 tcaatggaca agccggatga gttgctactc actcccgcca gcttgctgct acccgcccaa
     1741 gccagcgaag tgatccgctt cttctataag ggacccgcag atgaaaaaga gcgctactac
     1801 cgcattgtct ggtttgatca ggccctcagt gatgcgcagc gcgataatgc caaccgcagc
     1861 gctgtggcca ctgcttccgc ccgcatcggc accattctgg tcgtcgcccc ccgccaggcg
     1921 aactaccact ttcagtacgc caacggctcc ctgacaaata caggaaatgc gacgctgcgg
     1981 atcctcgcct acggcccttg cctgaaagcc gccaacggta aggagtgtaa agagaattac
     2041 tacctgatgc cgggcaagtc gcgtcgtttt acccgcgtgg acacggcgga taacaaagga
     2101 cgggttgcac tttggcaggg tgataagttc attcccgtga aatagatagc tgtgcagatg
     2161 gataacgaca atgcctttac gacggttctc cccaggactg aaagcccagt ttgccttcgg
     2221 catggtcttt ttgttcgttc agcccgatgc cagcgctgct gacataagtg cgcagcaaat
     2281 aggtggggtg attattccgc aggccttcag tcaggcgctt caggacggca tgagcgtccc
     2341 gctctatatt catctcgccg gtagccaggg tcgccaggac gatcagcgaa tcggcagcgc
     2401 ttttatctgg ctggatgatg gacagctacg catccggaaa atacagctgg aagagagtga
     2461 agataacgcc agtgtcagcg aacaaactcg acagcagctg atggctctgg ccaacgcccc
     2521 gttcaatgag gcccttacca tccccctgac tgacaacgcg cagctggatc tcagcttgcg
     2581 ccaactgctg ctgcagctgg tggtcaagcg cgaagcgctg ggcaccgtac tacgctcacg
     2641 tagcgaagac atcgggcagt ccagtgttaa caccctcagc agtaatctga gctataactt
     2701 gggcgtctat aacaaccagt tgcgtaacgg cgggagcaac acatccagct atctgtcgct
     2761 gaataacgtt actgcgctgc gcgaacacca tgtggtgctc gacggctcgc tgtacgggat
     2821 cggtagcggt caacaggaca gtgaattata taaagcgatg tatgaacgcg attttgccgg
     2881 tcaccgattt gccggtggaa tgctcgacac ctggaacttg cagtccttag ggccgatgac
     2941 cgccatttca gcagggaaga tttacggcct ttcctgggga aaccaggcca gctccaccat
     3001 cttcgacagc agccagtcag ccacgccagt gatcgccttt ttaccggcgg cgggcgaagt
     3061 acatctcacc cgtgatgggc ggctactaag cgttcagaac ttcactatgg gcaatcatga
     3121 agtggatacc cggggtctac cgtacgggat ttacgatgtg gaagttgagg tgatcgttaa
     3181 cggtcgcgtg atcagcaaac gcccccagcg ggtcaataag ctgtttagcc gggggcgcgg
     3241 cgtcggtgca ccactggcgt ggcaggtatg gggcggtagc tttcatatgg atcgctggtc
     3301 ggaaaacggg aaaaagacgc gaccagctaa agagagttgg ctagcaggtg cctcgacctc
     3361 cggctcattg agtacgctta gctgggcggc aacgggatat ggatacgata atcaggcggt
     3421 gggtgaaacc cgtctgacgc tgccgcttgg gggggcgatc aacgttaacc tgcaaaatat
     3481 gctggccagt gacagctcat ggagcagcat cggcagcatc agcgccactc taccgggagg
     3541 ctttagttcg ctgtgggtta accaggaaaa aacccgcatt ggcaatcaat tgcgacgtag
     3601 cgatgccgac aaccgtgcaa tcggcggcac actcaacctg aactcactgt ggtcgaagct
     3661 gggcacattc agcatcagct acaatgatga ccgccgttac aacagccatt attacacggc
     3721 agattactat caaaatgtct acagcggtac ctttggttcg cttggcctgc gggccggtat
     3781 tcagcgctat aacaacggcg acagcaacgc caatacaggg aaatatatcg ctctcgatct
     3841 ctcgctacca ctgggcaact ggtttagcgc agggatgacc catcaaaacg gctacaccat
     3901 ggcaaacctg tcagcacgca aacagtttga tgaaggaacc attcgcactg ttggtgccaa
     3961 tctgtcacgt gccatctccg gcgataccgg tgatgacaaa accctcagcg gtggggcgta
     4021 tgcacagttc gacgctcgtt acgccagcgg aacgctgaac gtcaatagcg cggcggacgg
     4081 ctacatcaat accaacttga ccgccaatgg cagcgtcggc tggcagggta aaaacatcgc
     4141 tgccagcggg cggactgatg gcaacgctgg ggtgatattc aacaccgggc tggaggacga
     4201 cggtcagatc agcgccaaaa tcaacgggcg gattttcccg cttaacggca agcgtaacta
     4261 tctcccgctc tctccctatg gaagatatga ggtggagtta cagaacagca aaaactcact
     4321 cgacagctac gatatcgtca gcggccgcaa aagccatctg actctctatc caggcaatgt
     4381 cgctgtcatt gagccagagg tgaagcagat ggttaccgtc tccggtcgta tccgtgcgga
     4441 agacggcaca ctgctggcta acgcacggat taacaaccat atcggccgaa cccgaaccga
     4501 tgaaaacggc gagtttgtca tggacgtgga taagaaatat cccactatcg attttcgcta
     4561 cagtggcaat aaaacctgcg aagtggcact ggaactcaac caggcgcgcg gtgccgtctg
     4621 ggtcggtgat gtggtctgca gcggcctctc atcgtgggcg gcggtgacgc agacaggaga
     4681 agagaatgag agttaaccta ctaataacga tgataatttt cgcgctaatc tggccagtaa
     4741 ctgagctcag agcggcagtg agcaaaacaa cctgggcgga tgcaccggca cgcgagtttg
     4801 tgtttgtcga aaacaactca gacgacaact ttttcgtcac tcctggcggg gcgctggatc
     4861 cgcgcctgac cggtgccaac cgctggaccg gtttaaaata cactggttca ggaaccatct
     4921 atcagcaaag cctcggctac attgataacg gttacaacac cggcctttat accaactgga
     4981 agtttgatat gtggctggaa aattcaccag tttcatctcc tttaactggc ttgcgctgca
     5041 tcaactggta cgctgggtgt aatatgacca ccagtcttat cctgccgcaa accaccgacg
     5101 ccagtggatt ttatggcgcg acggtgacca gcggcggcgc gaagtggatg cacggcatgt
     5161 tgtcagacgc gttttaccag tatctgcaac aaatgcccgt cggcagcagc tttacaatga
     5221 ccatcaatgc ctgccagacc tctgtgaact atgacgccag cagcggcgca cgctgtaagg
     5281 atcaggccac cggcaactgg tatgttcgca acgtcaccca tacgaaagca gcaaatctgc
     5341 ggttaataaa tacccactcg ctggcggagg tatttatcaa cagcgacgga gtaccgactc
     5401 tgggcgaagg gaacgccgac tgccggacac agaccatcgg cagcctttca ggattaagtt
     5461 gtaagatggt caactatacc ctgcaaacaa acggactcag caacacctca atccatatat
     5521 tcccggcgat cgccaactcg tcgttagcct cggccgtcgg ggcgtacgat atgcagttca
     5581 gtctgaatgg cagttcatgg aaaccggtga gcaataccgc ctattactac accttcaacg
     5641 agatgaagag cgcagactcg atctatgttt tcttctcgag caacttcttt aagcagatgg
     5701 tgaacctcgg gatcagcgat atcaacacca aagatctatt caactttcgc tttcagaaca
     5761 ccacatcacc ggagtctggc tggtatgaat tttctacctc caacacgctg attatcaaac
     5821 cccgtgattt cagcatcagt attatctccg atgaatatac tcagacaccg tcgcgggagg
     5881 gatatgttgg cagcggcgag tcggcactcg atttcggcta tatcgtaacc accagcggta
     5941 aaacagctgc cgacgaagtg ctgatcaagg tgaccggacc cgcgcaggtg attggcgggc
     6001 gctcctattg tgtcttcagc tccgatgacg gtaaggcgaa agtaccgttc ccggcgacac
     6061 tttcctttat tacccgcaac ggagctacaa aaacctacga tgccgggtgc gatgatagct
     6121 ggcgggatat gaccgatgcg ctgtggttga ccacaccgtg gactgatatc tctggcgaag
     6181 tggggcagat ggataagacc acagtcaaat tttcgattcc aatggataac gccatttcgc
     6241 tgcgtacggt agatgataac ggctggtttg gcgaagtcag cgcttcagga gagattcatg
     6301 ttcaggcgac gtggcgtaac attaactaag gccctgctga cagcggtctg tatgctggcg
     6361 gcacctttga cacaggcgat ttcggtcggc aatctgacat tttcgctgcc gtccgagact
     6421 gactttgtca gcaaacgtgt agtgaataac aacaaaagcg cacggatata ccgtattgcc
     6481 atcagtgcta ttgatagccc gggcagcagt gaattgcgca cccgaccggt ggatggtgaa
     6541 ctgcttttcg ccccccgcca actggcgttg caggctggtg agagcgagta ttttaaattt
     6601 tactatcatg gtccacggga taaccgcgag cgctactacc gggtctcatt tcgcgaagtc
     6661 cccactcgta accagacaag acgtagccca accggcggcg aggtcagcac ggagccggtg
     6721 gtggtgatgg ataccattct ggtagtacga ccacgtcagg ttcagtttaa atggtccttc
     6781 gacaaggtga caggaacggt aagtaacact ggcaacacat ggtttaagct actgattaag
     6841 ccaggatgtg attcgaccga agaggaaggc gatgcctggt atctacgtcc gggagacgtg
     6901 gttcatcagc ctgagttacg tcagccgggg aatcattatc tggtctataa cgacaaattc
     6961 attaagatta gcgattcctg tccggctaag cccccttcgg cggactaaga cttatccatc
     7021 ggtcgaggga agaattccac ctcagagccc caaaaatcgt ttaaatgatg tggaagcgat
     7081 cgtcaatatc acctgtaacg atgggctttc tcatatgcac accatagtgt tcaggagaca
     7141 cggaaaggta tcaggcagcc tgctaacgag tggtttaatc acgaattagt acgtaaaatc
     7201 ggtaacggct ggaaatcatt caatactcac actatcgaaa gttccccagc caaccgcggt
     7261 acgttcttac atacgatgta ccgctgttct ctttacgatt tttagctgta ctggtgaatt
     7321 atgagcaatc tgaatccatg catgacgtgt ggtgcctgtt gtgcattttt ccgcgtctct
     7381 ttttactggg ccgaagccga cgatgctggc ggtactattc ccgccaggct cactgaacaa
     7441 atatcccctt ttcaccgatg catgagcggt accaatcaga aaaacccccg atgtattgcc
     7501 cttgcaggaa ccccgggcaa aaatgcctgc tgcacgatat ataaaaatcg atcgtccaca
     7561 tgcagagaat tcgccatgtc tggtgagaac ggagtcgtca atgaggcttg caatcgtgca
     7621 agggctaaat acgggctgac accgttataa acatacaata attaattgca atgccccgcc
     7681 agcgataata gcggggcttc gtttttcagg ggtaacaaaa cccgatactt cttctatttg
     7741 ccagcaacaa tgcctctctt ctgtagcgtt cttcggatct acatcatcct gaagtagcgc
     7801 gatatactca ctgactatct gcatcagaat ataaaaagca atgtttttaa cctataaaaa
     7861 tggcgctgta tttgcgccat ttttatcatt caatgcatta tctgtttgag cctaaaggga
     7921 tctcagggtc tggctcatga gtaattctgt ttcgtaaatc tctgcgaata atttcaatag
     7981 accagaacca gactaaatgt ccaaaaattt cagaaacatt ctcataccac gggagatcaa
     8041 acagaggtgg cgtcagtccc atgagaggga atgaaatcat atgaacaaaa agttgggcta
     8101 aagcacctgc cagtaagccc tgccagagtt taatttttgg aaatacttca gcgaccacac
     8161 aataaccgac agcaaacact atcgaaaaga taatgtgcgt aacaccaacc cagttaaaga
     8221 catgcccggc aaaggtataa acagccgcat tgggatctgt cagccccaac cagtctcgaa
     8281 gaaaaatata cggtggattg agaaaattac gcgagcaatc aatttggcct gcagccctga
     8341 ttaatgattc cgggccacac gctgcattaa acatatccac cgggctacgt ggcggcaatg
     8401 gaacttcagc cccccacttc acgaatgcgg aaacaacgcc agcaatcagc ccaatgaatg
     8461 cagcaagacc ataacgtctg cggttcggtg gagtttgttc aaatatattc atatctaccc
     8521 tgcttgtacc attatgttat acacctcttc aggagtattc ataaaacaag gcaaatgtaa
     8581 agaactgtat tgttttgtat aacaagatgg tttcctaatc gccaatgaat ataagctcca
     8641 tcatttctcc ctatttttat attagaagtg acagagattt gcagggtgat gcagagctga
     8701 aaatcacagg tttccttatt ggtttttgca tcgtacaact aaagcaataa accagctccc
     8761 atcatcatca acatcccggc gaacatgaat ttattagccg ggctcatagc tgcattcgcg
     8821 ttttaagaat aatcctcctg ctgtcgccga ctatgcttaa catttaaaaa agcatcagca
     8881 ctctcgcaac gcactcttat tttccccttt agaataccgg aggcctggta tgagcaacca
     8941 aggcgaatac cccgaagata atcgggttgg gaagcacgag ccgcacgatt taagtttgac
     9001 ccgtcgcgat ctgattaaag tgagcgccgc aacagcggcg accgccgtgg tttatcctca
     9061 ttctacgctg gcggcaagcg ttccggcagc tacacccgcg ccagagataa tgcccctgac
     9121 actgaaggtg aacggcaaaa ccgagcagct tgaggtggat acccgaacca cgctactgga
     9181 cgctttgcgt gaaaatctgc atttgatcgg taccaagaaa ggttgcgatc acggacagtg
     9241 cggagcctgt accgtgctgg tcaatggtcg caggcttaat gcctgcctga cgcttgcagt
     9301 catgcatcag ggggccgaga tcaccaccat tgaaggcctg ggttcgccag ataatcttca
     9361 ccccatgcag gcggccttta tcaagcatga tggcttccag tgcggctact gcacctccgg
     9421 gcaaatttgc tcatcagtag cggtgctaaa agagattcag gacggcattc ccagtcacgt
     9481 cacggtcgat ttggtttccg ctccagaaac aactgccgat gagatccgtg aacgtatgag
     9541 cggcaacatc tgtcgctgtg gtgcatacgc taacatcctt gccgccattg aagatgctgc
     9601 gggggagata aaatcatgaa ggcgtttacc tatgaacgag tgaacacccc agccgaggcg
     9661 gcacttagcg ctcagcgcgt acccggcgca aaatttatcg cgggcgggac caatctgctg
     9721 gacctgatga agctggaaat tgaaacgccc acccacctta tcgatgtgaa cggcctcggg
     9781 ctcgataaga ttgaagtgac cgacgcgggt gggctgcgca tcggcgcact ggtacggaac
     9841 accgacctgg cggctcacga gcgcgtgcgt cgtgattacg cggtactctc ccgcgccctg
     9901 ctcgctggcg catctggtca gttacgtaat caggcaacca ccgcaggtaa tctgctccag
     9961 cgcacgcgct gcccctattt ttacgacacc aatcagccct gcaataagcg cctgcccggg
    10021 agcggctgcg cggcgcttga aggctttagc cgtcagcacg cggtggtagg cgtaagtgaa
    10081 gcctgcatag ccacccatcc gagcgatatg gcggtcgcaa tgcggttgct ggatgcggtg
    10141 gtggaaacca tcacgccgga gggaaagact cgcagtatca cactggctga tttttatcac
    10201 ccaccgggga aaacgccgca cattgaaacc gccctgcttc ccggtgagct tatcgttgcg
    10261 gtgacgttac ctccaccgct cggcggaaaa catatctacc gtaaggtgcg cgatcgcgcc
    10321 tcctacgcct ttgccctggt atcggtcgcg gcgattattc agcctgacgg cagcgggcgc
    10381 gtcgcgctgg gcggagtagc acataagccc tggcgcattg aggctgcgga tgctcagcta
    10441 tcccaggggg cgcaggccgt atatgacacg ctgttcgcca gcgcccatcc caccgctgaa
    10501 aacaccttta aactcctgtt ggcgaagcga acgcttgcct ccgtactggc tgaagcgagg
    10561 gcacaggcat gaaatttgat aaacccgcag gggaaaaccc gatcgatcag ctgaaggttg
    10621 tcggtcgtcc ccatgaccgc atcgacggac cgctgaaaac taccggcacg gcacgctacg
    10681 cctacgaatg gcatgaagag gcccccaacg ccgcctatgg ctatatcgtc ggttccgcca
    10741 ttgccaaagg acgcctcacc gcccttgata cggacgccgc gcaaaaagcg ccgggcgtac
    10801 tggctgtcat taccgccagt aacgccgggg cactcggcaa aggcgacaaa aacaccgcca
    10861 ggctgttagg cggccccact attgagcact atcatcaggc cattgcgctg gtagtggccg
    10921 agaccttcga acaggcgcga gcggcggcct cgctggtgca ggcacactat cgccgtaata
    10981 aaggagctta ctccctggcg gacgaaaaac aggccgtcaa tcagccgccg gaagacacgc
    11041 ccgacaaaaa cgtcggtgac tttgacgggg ctttcacctc cgctgcggtg aagattgatg
    11101 ctacctacac gaccccggac cagagccata tggcgatgga gccgcatgcc tcgatggccg
    11161 tctgggatgg aaataagctt accctctgga cctcaaatca gatgattgac tggtgccgca
    11221 ccgatctggc aaaaacgctg aaagttcccg tggagaatgt gcgtattatc tccccgtata
    11281 tcggcggagg gtttggcggc aagctgttcc tgagaagcga tgcgctgctg gcggccctcg
    11341 ccgcccgagc ggtgaaacgt ccggttaaag tgatgctccc ccgcccctct attcccaata
    11401 acaccacgca ccgccccgcc acccttcagc acttgcgtat cggtgccgac cagagcggga
    11461 aaatcaccgc tatctcacat gaaagctggt ctggaaacct gcccggcggc acgccggaaa
    11521 cggcggtaca gcaaagcgaa ttactctacg ccggggcgaa tcgtcatacc ggcctgcggc
    11581 tcgccacgct tgatttgccg gaagggaacg ccatgcgtgc gcccggcgaa gcccccggtc
    11641 tgatggcgct cgaaatcgcg atcgacgaac tggcggaaaa agcgggcatc gatcccgtcg
    11701 agtttcgcat cctgaatgac actcaggttg accccgccga cccgacgcgc tgcttctctc
    11761 gccgtcagct tatcgagtgc ttgcgcaccg gagcggataa atttggctgg aagcagcgca
    11821 acgccacacc cggacaggtg cgcgacgggg agtggctagt cggccacggt gttgcggcgg
    11881 gctttcgcaa taatctgctg gaaaaatcgg gtgctcgggt tcacctcgaa caaaacggca
    11941 ccgttaccgt agaaacggac atgaccgaca ttggcaccgg cagctacacc attctggccc
    12001 agacggcagc ggaaatgctt ggcgtaccgc tggagcaggt tgcggttcac ctcggcgatt
    12061 ccagtttccc ggtttctgcg ggttctggtg gacaatgggg cgcgaatacc tccacctccg
    12121 gcgtttacgc cgcctgtatg aagcttcgcg aaatgattgc ctcggcagtc gggtttgatc
    12181 ctgagcagtc gcagtttgcc gacggcaaga ttaccaacgg tacccgaagc gccacgctac
    12241 atgaagccac cgcaggcggc agactgacag cggaagagag cattgaattc ggaacactga
    12301 gcaaagagta ccagcagtcg acctttgccg ggcattttgt ggaggtcggc gtgcatagcg
    12361 cgacgggaga agttcgggtc cggcgtatgc tcgctgtgtg tgctgcagga cgcatcctga
    12421 atccgaaaac tgcgcgcagc caggtcattg gtgcaatgac tatgggcatg ggtgcggcac
    12481 tgatggagga gctggcggtg gatgaccgtt tgggctactt cgttaatcac gatatggcgg
    12541 ggtatgaggt gccggtccat gcggatatcc caaaacagga ggtgattttc ctggatgata
    12601 ccgaccccat atcctccccg atgaaggcca aaggtgtcgg tgagttgggc ctgtgcggcg
    12661 tgagcgcggc tatcgccaac gcggtgtata acgccaccgg tattcgggta cgggattatc
    12721 ccatcactct ggataagctg ctcgataagc tgccggatgt ggtttaagga gaaacaatgt
    12781 catacccgct ttttgataaa gacgaacact ggcataagcc agagcaggcg tttctcaccg
    12841 atgaccaccg gaccattctg cgcttcgccg tagaggcgct aatgtccggt aaaggagcgg
    12901 tgctggtgac gctggtggag atacacggcg gcgcggcgcg cccgctcggg gcgcagatgg
    12961 tggttcgcga agatggtcgt tactgcggtt ttgtctctgg cggctgcgtg gaggccgctg
    13021 ccgcttttga agcgctggag atgatgggct caggccgcga tcgcgaaatt cgctatggcg
    13081 aaggttcgcc gtggtttgac atcgttctgc cctgcggcgg tgggatcacg ctgacgctcc
    13141 ataaactacg ctcggcacag cctctgctcg ccgtgctgaa ccgtctggaa cagagaaaac
    13201 cggcggggct gcgctacgat ccgcaagcac aatcgttggt gtgcctgccc acgcaaaccc
    13261 gaacgggctg gaatctcaat ggctttgagg tggggttcag gccatgcgtc aggctgatga
    13321 tttacggacg ttctcttgag gcgcaggcaa ccgcgagtct tgcagcagcc acaggctatg
    13381 acagccatat cttcgatctt tttccggcct cagccagcgc tcagatcgat accgacacgg
    13441 cggtcatttt gctgtgccat gatctcaacc gggagctgcc agcattgcag gccgcgcgag
    13501 aagcaaaacc cttttatctc ggcgcattgg gcagccatcg aacccacacg ttacgtctgc
    13561 aaaagctcca cgagctggga tggtccaggg aggagacagc gcaaatccgg gcccccgtcg
    13621 ggatattccc caaagcccgg gatgcgcata ctctggcact ctccgtgctg gcagaaatcg
    13681 cctctgtacg tctccatcat gaggaggatt catgcctgcc cccgtcgtcc tgatccttgc
    13741 ggccgggcgt ggagagcgct ttctcgcctc cgggggaaat acccataagt gtatcggctg
    13801 gcgtcagtcc ccggaggttg cgccttatcg ctggccattt gaagaaaacg ggagaacttt
    13861 cgaccttgcg attgaaccgc agattacgac taatgatctg cgtctgatgt tgaggctggc
    13921 tcttgccggc ggaggaataa caattgccac tcaggaaact ttcaggccat atattgaaag
    13981 cggtaagctt gtatcgctgc ttgatgactt tcttccacaa tttccgggct tctatctgta
    14041 tttcccacag cgtcgcaata ttgcaccaaa gctccgcgcc ctgattgact acgtcaaaga
    14101 atggcggcag caattggttt aaatagctgc acctgcactg cctgatgtca gaacagtatt
    14161 ttgatgaatt gccaaggtta caatggcaca aatgcggcac aggaggaaac gtggtgtatt
    14221 taaatatggg gtaactcttt gattttaatg gtgccgataa taggagtcga acctacgacc
    14281 ttcgcattac gaatgcgctg ctctaccaac tgagctatat cggccctgaa aggacatgtt
    14341 cacgaacgtg aatcacggtg gacaaggtta aaactaaccg ggcgatgcgt caatggcctt
    14401 gtgaatcaaa tggctacttt tgcatcaccc ggttttattt acgcacgaat ggtgtaatca
    14461 ccaatgccga tccacttgta agtggtcagt gcttccagcc ccattgggcc acgcgcgtgg
    14521 agtttttgtg tgcttaccgc cacttccgca cccagaccaa actggccgcc gtcggtaaaa
    14581 cgcgtagagg cgttaacgta aacagcggac gaatccactt cgttaacaaa acgctgggcg
    14641 ttgcgcatat cgcgggtcag gatcgcatcg gagtgttgtg tgccgtgttc acgaatatgg
    14701 gcgatggcat cgtcaagatc gctgacgatt ttgacgttca aatctaatga cagaaactca
    14761 tcgtcatact cttcggcttt aacagcaacc accttcgcag ggcctgcctg caactgcgcc
    14821 agtgcagctg catctgcgtg taatgtcacg ccgctttccg ccatttgttt gcttaatgcg
    14881 ggcaggaagc tatcggcgat gtttttattc accagcaacg tttcaaccgt attacatgtg
    14941 ctcggacgct gagttttcgc gttgacgatc acttttaatg cttcagcgat ctctacactt
    15001 tcatcaacgt aaatatggca tacgcctata ccacctgtga tcaccgggat tgtcgactgt
    15061 tcacggcaca gtttatgcaa accagcgcca ccacgcggga tcagcatgtc gatgtattta
    15121 tccatacgca gcatttcact gaccagcgca cggtcaggat tatcaatcgc ctgcacggca
    15181 cccgccggta agccgcagga tttcagggcg tcctgaatca ccgccaccgt tgcagcgtta
    15241 gtgcgacacg tttctttgcc accgcgcagg atcaccgcat taccggtttt caggcacagc
    15301 gaagcgacat caaccgtcac gttcgggcgc gcttcataaa tcacgccaat aacccccagc
    15361 ggtacgcgac gacgctcaag acgcaggccg ctgtccagta cgctgccatc gattacctgc
    15421 cccaccggat cggcgaggtt acacacctgg cgcacatcat cggcaatgcc tttcagccgt
    15481 gcgggcgtca gtgccagacg gtcaagcatc gcttcgccaa ggccattggc acgcgcgtca
    15541 gcaacatcct gggcgttagc gttgaggatg atttcgcttt gtgcttccag ttcatcggcg
    15601 attttttcca gcacgcgatt tttttcgcgg ctggagagtt gcgctaattt atacgaggct
    15661 tgcttcgcgg caatgcccat ttgttccagc atcagcctgc tccttaacgg gtaatcatgt
    15721 catcacggtg aacggcaacc gggccgtatt catatcccag tattgcatca atttcttgcg
    15781 agtggtgccc ggcaatacgg cgtaatgcat cgctgttgta acgactgacg ccgtgggcga
    15841 tatcgcgacc ttcgaggttg caaatgcgga tgacttcacc acgcgagaaa ttgccagtca
    15901 cgcttttaat gcctttcggc aacagggagc tgccgcgttc aagaatggcg gcagttgccc
    15961 cttcatctac cgtgatttca cccgccggcg gcgcaccgaa aatccagcgt ttacggtttt
    16021 caagcggagt cgcctgggca tggaacagcg taccgacgga aatgccttcc atcacatcac
    16081 caataacgcc cggcttgctg cccgcggcaa taatggtgtc gatacccgca cggcaagcca
    16141 cgtcagcggc ctgcaatttg gtactcatgc cgccagttcc gaggcctgaa acgctgtcac
    16201 cggcaatcgc gcgcagtgcg tcatcaatgc cgtaaacatc tttaatcagt tctgcctgcg
    16261 gattgctgcg cggatcagcg gtatacaaac ctttttgatc ggtcagcagc aacagtttat
    16321 cggcacccgc cagaatcgcc gccagcgcag aaaggttatc gttatcgccg accttaatct
    16381 ctgccgtagc gacagcatcg ttctcattga ttaccggaac gatattgtta tcgagcaacg
    16441 cacgcagggt gtcgcgggcg ttcaggaagc gttcacggtc ttccatatca gcacgggtca
    16501 gcagcatctg cccgacgtga atgccataaa tcgaaaacag ctgttcccac agttgaatca
    16561 gtcgactctg ccctaccgcc gccagcagtt gtttcgaggc gatagtcgct ggcagttccg
    16621 ggtaccccag gtgctcacgt ccggcggcga tcgcgcccga cgtcacaata acaatccgat
    16681 gcccggcggc atgtaactgc gcgcactggc gaacaagttc aacgatatgg gcacggttca
    16741 gacggcgcga tccgcctgtt agcacactgg tgccgagttt taccaccagc gtctggctgt
    16801 cactcatgat tctctgccat tcaattttag gaaaaatgat atcaaacgaa cgttttagca
    16861 ggactgtcgt cggttgccaa ccatctgcaa gcaaagcatg gcgttttgtt gcgcgggatc
    16921 agcaagccta gcggcagttg tttacgcttt tattacagat ttaataaatt accacatttt
    16981 aagaatatta ttaatctgta atatatcttt aacaatctca ggttaaaaac tttcctgttt
    17041 tcaacggggc tctcccgctg aatattcgcg cgttaattaa aatcaggaat gaaaatgaaa
    17101 aagagcactc tggcattagt ggtgatgggc attgtggcat ctgcatccgt acaggccgca
    17161 gaaatatata acaaagacgg taataaactg gatgtctatg gcaaagttaa agccatgcat
    17221 tatatgagtg ataacgacag taaagatggc gaccagagtt atatccgttt tggttttaaa
    17281 ggcgaaacac aaattaacga tcaactgact ggctatggcc gttgggaagc ggagtttgcc
    17341 ggaaataaag cggagagtga tactgcacag caaaaaacgc gtctcgcttt tgccggattg
    17401 aagtataaag atttgggttc tttcgactat ggccgtaacc tgggcgcgtt gtatgacgtg
    17461 gaagcctgga ccgatatgtt cccggaattt ggtggcgact cctcggcgca gaccgacaac
    17521 tttatgacca aacgcgccag cggtctggcg acgtatcgga acaccgactt cttcggcgtt
    17581 atcgatggcc tgaacttaac cctgcaatat caagggaaaa acgaaaaccg cgacgttaaa
    17641 aagcaaaacg gcgatggctt cggcacgtca ttgacatatg actttggcgg cagcgatttc
    17701 gccattagtg gggcctatac caactcagat cgcaccaacg agcagaacct gcaaagccgt
    17761 ggcacaggca agcgtgcaga agcatgggct acaggtctga aatacgatgc caataatatt
    17821 tatctggcaa ctttttattc tgaaacacgc aaaatgacgc caataactgg cggctttgcc
    17881 aataagacac agaactttga agcggtcgct caataccagt ttgactttgg tctgcgtcca
    17941 tcgctgggtt atgtcttatc gaaagggaaa gatattgaag gtatcggtga tgaagatctg
    18001 gtcaattata tcgatgtcgg ggctacatat tatttcaaca aaaatatgtc agcgtttgtt
    18061 gattataaaa tcaaccaact ggatagcgat aacaaattga atattaataa tgatgatatt
    18121 gtcgcggttg gcatgaccta tcagttttaa tgattattgc cggatgtgat gcatccggca
    18181 catttcactc acgccgttaa cttcaccggc tcgtcacgaa aatcatccgc cggttccagc
    18241 ttcagattca gcgtcgtcag cagttcacgc agcttctcgt gaaactcacg cagggtgtgc
    18301 tccagtcgtt caaccacttc agtgtctttt accggaacac tcttccagtc gcctgcttta
    18361 tcgaacagac caaactggta gctgtaggta aaacgggatt cctgcgcttc cagctccatc
    18421 caccagcccc agaattcacg cacttccggt gccggtttca cgttgacgca tacagccaga
    18481 caatcgaaaa agaatcgatt atcttcgcac ttaccttcac gaatatacgg gcctagtgcg
    18541 gtaaattttt tgatcaatct gctcttcggg tgtccactcg gtaacgtcat tgctatctcc
    18601 tgttgtgatg caactgtttt accaaattgg caaaatttag caaattttta acacaagcgt
    18661 ttttcgatcc agccggtgat ttcctgaaga cctttgtcaa aattccgata caccgggtta
    18721 aatgggatct ctaataattt accgtcagca gatgatgagg tgattaagcg tgagtcctct
    18781 tccgggctga acggatcgtt cttccagtag cctgataaca ttggcgttgg gcagcgacgt
    18841 cccagcaatc cttgcacttt taatgaatag cgattcagct ccacgcgtaa cgcttcgtcg
    18901 gaagcatcat gcatccccaa acgactcgcc agaacgtcaa gatacatttc cggcacctgt
    18961 tgctggcact taaaatcact caacagggta tgaactaccg gaccaagaca ggcaaccgct
    19021 ttcagacgcg gcgattcaag atatgccaga cgcacggcaa cgttagcgcc gaaacggaaa
    19081 ccaaaggccg cgacgcgagt gtgatccacc cacggtacgt taggcagcgc ctttaagacg
    19141 tgctgatgca acaggctgga gtcctgggtg agcttccatt ttgaagaaaa gcccaccgac
    19201 ggcatatcaa tagtcagcat cgcaatgccg cgcggcgcaa aataacgttc atacaggctg
    19261 taatagtccg tctgcatcgc atccagacca ccacacatta atactgtcgg gaacgggcca
    19321 tcgcctttcg gcatatgcaa aaagccggtg atgggcgcac cgccgggtac ggtaaactcc
    19381 atctgccgca tcgtgcccgg cagacgctgg gcggcctctt cataggcgcg gtttgataaa
    19441 gcctgcgctt gctcggccag gtcatctcct ttcagatgag gataggcggc aatgttgtac
    19501 aacgtagccg catgcagcca gtgtcgacca ctgagttgcg gatcttcttc cgcacaggct
    19561 ttttgttgcc acaccatcgc ctgggtggcc cactcataaa tccagttgcc accacggtag
    19621 ccaatcacag tatcgtataa atcatcgtcg gtacgttcag catcgctcat cacaatacgt
    19681 gcctggacgt cgaggatttc acgtgggtca ataccgcgcc agatccacat cagacggtta
    19741 atcatgcgat accagtgagg gatggtttta ccatcaagag ccgactgcac aggcggttgt
    19801 gcgccgtgat taaagcggcg gactagcgtc gaggtttcag gatgtttaaa gcggggtttg
    19861 aacagggttt cgctcaggtt tgcctgtgtc atggatgcag cctccagaat acttactgga
    19921 aactattgta acccgcctga agttaaaaag aacaacgccc ggcagtgcca ggcgttgaaa
    19981 agattagcga ccggagattg gcgggacgaa tacgacgccc atatcccacg gctgttcgat
    20041 ccaggtatct tgcgggatat caacaacata atcatcaacc agcggacgac cagccggttt
    20101 tgcaaagatg gtgacaaagt gcgcttttgg atacatttca cgaatcgcaa ccgcagtacc
    20161 accggtatcc accaggtcat caataacgat gaagccttcg ccatcgcctt ctgcgcgttt
    20221 cagcacttta agctcgcgct ggttgtcgtg atcgtagctg gaaatacaaa cggtatcgac
    20281 atgacgaata cccagttcac gcgccagtaa cgcacccggt accagaccgc cacggcttac
    20341 ggcaataatg cctttccatt gttcagaagg catcagtcgg cttgcgagtt tacgtgcatg
    20401 gatctgcaac atgtcccagg tgacgatgta tttttcgctc atgtgaagtg tcccagcctg
    20461 tttatctacg gcttaaaaag tgttcgaggg gaaaataggt tgcgcgagat tatagagatc
    20521 tggcgcacta aaaaccagta tttcacatga gtccgcgtct ttttacgcac tgcctctccc
    20581 tgacgcggga taaagtggta ttctcaaaca tatctcgcaa gcctgtcttg tgttgacaac
    20641 attttctgct aaccctgtga cctgcaatac tgttttgcgg gtgatcgaca aggagactta
    20701 acgtgtctga actgtctcaa ttatctccac agccgctgtg ggatattttt gccaaaatct
    20761 gttctattcc tcacccgtcc tatcatgaag agcaactcgc tgaatacatt gttggttggg
    20821 caaaagagaa aggtttccat gtcgaacgcg atcaggtagg taatatcctg attcgtaaac
    20881 ctgctaccgc aggtatggaa aatcgtaaac cggtcgtctt acaggcccac ctcgatatgg
    20941 tgccgcagaa aaataacgac accgtgcatg acttcacgaa agatcctatc cagccttata
    21001 ttgatggcga atgggttaaa gcgcgcggca ccacgctggg tgcggataac ggcattggta
    21061 tggcctctgc actggcagtt ctggctgacg aaaacgtggt tcacggcccg ctggaagtgc
    21121 tgctgaccat gaccgaagaa gccggtatgg acggtgcgtt cggcttacag agcaactggt
    21181 tgcaggctga tattctgatt aacaccgact ccgaagaaga aggtgaaatc tacatgggtt
    21241 gtgcgggggg tatcgacttc acctccaacc tgcatttaga tcgtgaagcg gttccagctg
    21301 gttttgaaac cttcaagtta accttaaaag gtctgaaagg gggtcactcc ggcggggaaa
    21361 tccacgttgg cctgggtaat gccaacaaac tgctggtgcg cttcctggcg ggtcatgcag
    21421 aagaactgga tctgcgcctt atcgatttca acggcggcac actgcgtaac gccatcccgc
    21481 gtgaagcctt tgcgaccatt gctgtcgcag ctgataaagt cgacgtcctg aaatctctgg
    21541 tgaataccta tcaggagatc ctgaaaaacg agctggcaga gaaagagaaa aatctggcct
    21601 tgttgctgga ctctgtagcg aacgataaag ctgccctgat tgcgaaatct cgcgatacct
    21661 ttattcgtct gctgaacgcc accccgaacg gtgtgatccg caactcagac gtggcaaaag
    21721 gtgtggtcga aacctccctg aacgtcggtg tggtgaccat gactgataat aacgtagaaa
    21781 tccactgtct gatccgttca ctgatcgaca gcggtaaaga ctacgtggtg agcatgctgg
    21841 attcgctggg taaactggct ggcgcgaaaa ccgaagcgaa aggcgcatat cctggctggc
    21901 agccggacgc taattctccg gtgatgcatc tggtacgtga aacctatcag cgtctgttca
    21961 acaaaacgcc gaacatccag attatccacg cgggcctgga atgtggtctg ttcaaaaaac
    22021 cgtatccgga aatggacatg gtttctatcg ggccaactat caccggtcca cactctccgg
    22081 atgagcaagt tcacatcgaa agcgtaggtc attactggac actgctgact gaactgctga
    22141 aagaaattcc ggcgaagtaa ttatttgatt tgctgccgga tggcgtttaa tcgccttccg
    22201 gcagtttcat ccttcattat ccttcgataa aagccatccc tgtaaatgtc cgtctcgggt
    22261 tgccacgttc aatctggtga tggaacattc gccgctgcga tttcagcacc gcgctatttt
    22321 cctgttgctg ctgctccagc ttccaggcaa tcagcaatcg tgccagccgc ttgttagcat
    22381 gctgactacg ctctgactga accttcacgc taataccgga tgccaaatgc gtggcgcgta
    22441 ccgccgagtc ggttttattg acatgttgac cgcccggccc cgacgaacgc aacgtctcat
    22501 aacggattgc atccgattgt tcctgctcat cagcggtaaa acgcccaatg cccagaaacc
    22561 agtttttgcg cccatgatga ggccgatacg gactcggaca aatccactga atagtgccac
    22621 accagctttc gcttaatgcc catgcgttat cgccatccag agaaatcagc gccgaacgca
    22681 gcgtgtcaga gtagtggccc gtttctgttt ccagcaccgt taccgcgacg tcttgtcggg
    22741 cagcttcttt aattagcctg tccagcgcct ttttcactgc gagacaacat tcttccggcc
    22801 cctgcgctga ggagagttgt agcaagatca tccttttttc cctccactgt ttttgagcgt
    22861 tagcaccgga cgcagccgcg cgacaggaat aattaaaccg gcctgcacca gacattgcac
    22921 cacgctttca gccgatttat aggcttgtgg cgcttcttca aagatgagtt gtttatcgcg
    22981 acaaattacc cgactgccaa gttcagtacg cgagagttgc gtcgccgtgt atttcgctgc
    23041 cagacgccct ttacactcgg tgcgccccca tttacgccct gccccatgcg ccagcgagtg
    23101 gagcgttttt tcgttcgcaa caggctgtac aatccaggag taatcaccac gtgaaccggg
    23161 aataatcacc agaccgttgt catccggcgt ggcaccttta cgatgcaacc agccctgttg
    23221 atcgccgatt tgacacgcgc taacaaagtt atgcgccaca tccagaaccg gacttcccgt
    23281 ggccttaact tgttgcatta tgcgcaaagc gatcatctgg cgattaatac acgcaaacgc
    23341 cagcgcatcg tcatgttccg caatataccg tagcgcgtcg tcactacctt gaggcaaacc
    23401 atgatgcgag aacgaggcaa tatgccgctg taaaatagac tgccccaccc cccgcgagcc
    23461 gctatgaacc aacagttgca gatgttgtgc atccagacct gccagtgcaa acagttcagc
    23521 gttgatgatt tgatcaactt gttgcagttc agcgaaatga ttgccgccac cgatagagcc
    23581 aagcgagctg cgccacggat gctgtgcaaa tgctgacggc aggttttcct ccagccagct
    23641 ttcttcagca acgtcatcca gatctgataa tcgcttttca aacttatcgg cgttgtattt
    23701 gcgagtgaga atatctgttt gccatagcgc cataccgcag ccgatatcat tgccgaccag
    23761 tgccggataa aaacgaccaa cagagaagaa cgctgcgcca atcggatagc cgcgtccggg
    23821 atgtaaatct ggcatcccca ctacgcgctg catgttgggt aaatttgccg tggtgtgtaa
    23881 ttgttggatc gctaaactct cgatccacag gtcatcagat gcgatggtaa ataccgcatc
    23941 ggataaggga cgaatataat tgcccatata ccattccgta aatagactcg tcatacttca
    24001 agttgcatgt gttgcgactt gaattattga gagtaacaat taaaaaatca ggaaatggca
    24061 gacgaatcca gggcaagaaa aaaagaatta atcctggaaa ggtctgcaaa gagtcattga
    24121 taaaggattt gtcatgattt acctccttgc agtttgtgga ataagaaaac gcgcacatac
    24181 taggcttgcg ttattttcat tgcaagctgg atttaatgtt gctgtttata acgcatataa
    24241 aaattaataa accactctcc ccgacattca acgcgttgct gcttaactgt ctgaaaacca
    24301 taacgttcaa aaaagggttt tgcggttatg cttgcgtcca ccgtaagttc ggattcagac
    24361 ttaatcaaag gttttaacaa agcgctggca accccacggc gggtgtattc agggtcaaca
    24421 aataacatat cgatatagtg ttcaacgcag gtaataaagc cgaccagttt tgcattaatg
    24481 actgcaaccc gcacttgtga tttcgcgagt ttctccttcc agcgagattc gtcaatctgc
    24541 gcccaggcgg caatttgttg tggtgaataa tgctgactgg cagtcatcgt aaccgctcta
    24601 atgaaaatag cgcatagttg ctgaaaatcg ccaggctgat agtctcttat ttgtatgtta
    24661 ttcataatcc cagcaccagt tgtctttcca tttgcgggtc aagcaacgtc acatgcagcc
    24721 ccaccagtcg cacaccgcgc ccgccgcggc gttcatccca ggttttacgc gcggtggcga
    24781 ttaagtcagc tttattcagc cgcggccaga cgtgctcctg agtggtttgc tgaaaatcgt
    24841 cgaactttaa tttcaccccc tggcgagcaa tcagtaaatc aggtttcacc tttgccagac
    24901 ggcgttcaag ttccggatac agccgctcga taatcgcttc acattcagac cagtggtgga
    24961 tatcttccgc catcgtgcgt tccacgccga cggattttcg caaccgttcg ctgttaacgt
    25021 cgcgctcgtc aatcccctga ctacgctccc acaaaatgcg gccaaatttg ccaaagcgtt
    25081 taagcagcat caccagatca cacttttgta catcaccgca ggttcgtagc cccatcgctt
    25141 ccagttttgc cgccgagact ttgccgacgc cggggatttt tgccagtggt aaggtttgta
    25201 aaaatgccgg aacttctgcc ggcgtaatca caaactgacc gttgggttta ttcatgtcgg
    25261 aggcgatttt ggcgagaaac tttactggtg ccacgcccgc agatgccgtc agttgcagct
    25321 cgttgaaaat cgtctggcgg atttcctggg cgatgagagt cgcagaaccg tggcaatgga
    25381 cgctatcggt gacatcgaga taggcttcat ccagtgacaa cggttcaatg cgcgaggtgt
    25441 agcgcgagaa aatttcgcga atatgatttg aggcttcttt gtaggcgtca aagcgccccg
    25501 gaagcaaggt gagatgcggg cataatttga gcgccatccc tgtcggcata gcgctacgta
    25561 cgccaaattt acgcgcggga taattggcgg tgctgatcac cccccgacgt tcgcggctgc
    25621 cgccaatagc aatagggata tcgcgcaggg cgggattgtc gcgcatctcc accgctgcga
    25681 aaaagcagtc catatccaca tgaatgattt tacgcattgc tcacctctca acactggtaa
    25741 agtatacagt gatttcaggg tttgagaaat gcgtaaagat tcagcatcta gcgcgttcgc
    25801 tgtgaaagca cctgctgctt atccagcttt tgcaccagcg gctgcaccac tttatcccca
    25861 tgctgaccaa agtattgata cagcgtatcg gacgcacttt tggtcagcac cataatctca
    25921 atgcgccggt tgcccgcgct ttgcggattt ttcgcgtcca gcagcatctg gtccgccatt
    25981 gcgcttacct gcatcacttt atcttccggc attccggcct cttccagcac ccgacgagct
    26041 gaaagcgcgc gatcgcccga aaggttccag ttgttgtaga tattgttttt gtaggccatc
    26101 gcatcggtat gcccggtaat aataattttg ttatcgagcg agtcgaaaac tggcgcgagc
    26161 tccaccagca gccttttaaa gaacggcata atctgcgcgc tgccgcgttc gaacatattg
    26221 cgattctggt cgtctttaat cagcacgcgt aatccctgcg ggacaatctc catctccaga
    26281 ttcgcttcca tatgcgcatc acgggcaatg gtgttgatac tggttgccag ctcgccaagc
    26341 tcggtggcgg atttcttctt cagcagcacc gttttctcat tgacgtcacg cgcttttttc
    26401 tccgtctctt ccggcaccgc cacggtggca ggttttggcg gatgagacgg gctgatttta
    26461 tttaacggcg acagcccacc accgttaaaa atcgactgcc cgtgcagcgc ggcgataatg
    26521 ctttcacgct cggatttact gacgctgttg acaatcaact ttattgtcgt caccaaaggg
    26581 gccgagcgta tttccgaggt ttcagcccgc tttaccctgg atgcgatgcc cggtaagcag
    26641 atggcgattg acgccgatct taatgccggg ttgatcaatc aggcgcaggc acaaacccga
    26701 cgtaaagatg ttgccagcga ggccgatttc tacggcgcga tggacggggc atcgaaattt
    26761 gtgcgcgggg atgctatcgc cgggatgatg attctggcga tcaacctgat cggcggcgtc
    26821 tgtatcggga tcttcaaata caacctgagc gccgacgccg ccttccagca gtatgtgctg
    26881 atgaccatcg gcgacgggct ggtggcgcaa atcccttccc tgctactctc caccgcggcg
    26941 gcgattatcg tcacccgcgt cagcgacaac ggcgatatcg cccatgacgt gcgtaaccag
    27001 ttgctggcaa gcccgtcggt gctctacacc gctaccggaa ttatgttcgt actggcggta
    27061 gtgccgggaa tgccacatct gccgtttttg ctgttcagcg ccctgcttgg ctttaccggc
    27121 tggcggatga gcaaacgccc gcaggcggcg gaagcggaag agaaaagtct cgaaacgctg
    27181 acccgcacca tcaccgaaac cagcgagcaa caggtcagtt gggaaaccat tccgctgatc
    27241 gagcccatca gcttaagcct cggctacaag ctggtggcgc tggtggacaa agcccagggc
    27301 aacccgctca cccagcgtat tcgcggcgtg cgacaggtga tatccgacgg caacggcgtg
    27361 ctgctgccgg agatccgcat tcgggaaaac ttccgcctta agcccagcca gtacgctatt
    27421 ttcatcaacg gcattaaggc tgatgaagcg gatattccgg cggataaact gatggcgctg
    27481 ccctccagcg aaacctacgg cgagatagac ggcgtgctgg ggaatgaccc ggcgtacggg
    27541 atgccggtga cctggatcca gcctgcgcag aaagcgaagg cgctgaatat ggggtatcag
    27601 gtgatcgaca gcgccagcgt gattgctacc catgtaaata agattgtgcg cagctatatt
    27661 cctgatttat ttaactatga cgatattacg cagttgcata accgtttggc gtcgatggca
    27721 ccgcgcctgg cggaggattt aagcgcggtg ctcaattaca gccagttgct gaaagtgtac
    27781 cgggcgctgc tgaccgaagg cgtttccctg cgcgatatcg tcaccatcgc caccgtgctg
    27841 gtcgccagta gcgcggtgac caaagatcat attctgctgg cagccgatgt gcgcctggcg
    27901 ctgcggcgca gcattaccca tccgttcgtt cgcaagcagg agctgacggt gtataccctg
    27961 aataatgagc tggaaaatct gctgactaac ctagtgaatc aggcgcaaca gggcggtaaa
    28021 gtgatgctcg acagcgtgcc agtggacccg aatatgctca accagttcca gagtacgatg
    28081 ccacaggtga aagagcagat gaaagcggcg gggaaagacc cggtgctgct ggtgccaccg
    28141 cagctgcgcc ctttgctggc gcgttatgca aggttgtttg cgccggggct gcatgtgctg
    28201 tcgtataacg aagtgccgga tgagctggag ttgaagatta tgggggcgtt gagttgatgg
    28261 gggattcttt tccatgcttt gcagcacctg acaccattaa ttgacgtcac actgcaaaga
    28321 gactacgatg acaccataca atgacgtcat ggattgatag tatgattaag gtcagcgcgc
    28381 taggttctcg tcatagaaaa acattcgacg atgtaatgac ggagccgcca aaatctggaa
    28441 ttaaatggga tgatgttgtt gcactcatta aagctgtggg tggaacaata aaaaataaca
    28501 acggctccag acgaaaattt cagattggaa cgaccaaatt cagcacacat gagccacatc
    28561 caaaaaatgt gatggataaa ggcgcagtag caggtcttaa ggagtggttt gttaactgtg
    28621 taggggtaga ttatgaataa agcatcgaac attatcacaa ttaaaggtca accagccgca
    28681 gtaacatttg aagccgatat caacgcattt cgcggcaagt tcctcaatgt aaacggttat
    28741 tgtgactttg tagccacaag tattgaggca ttatatcgtg aaggcgaaag cgcgctggat
    28801 gagtggatgg cggattgtga agaggacggt attgcccctt ttcgtgaaga agaagagcaa
    28861 aaacgcctga cgcttcgtgt tcctcatcac attgattcgc ggctgaccat cgtcgccaga
    28921 caacattcca tttcaaaaaa ccagctcatt gttgatgtct tagaacgtga gttttcagcc
    28981 cagatgtaaa caggtcggat gccgcgtggc atccgacctt ttgccagttc gtcaatatta
    29041 cccatttaca aaatcgtctc ctccgtcaaa atccgccgcg cgcctaaaaa gtgatcctgc
    29101 cagaaaggtt cagctaactg acttacccga atggtttccc cggtgcgcgg tgactcaata
    29161 aactgaccgt cgcccagata cacccccata tggtcggcaa tctcgcggct gtggatatgg
    29221 aaaaatagca aatctccccg gcgcaggtcg ttattcgcca caatggttgc ccggcgatag
    29281 tgatacatct cattagccgt gcgtgggagt ttcgcctcaa ggatcttgtt gtaggcataa
    29341 aaaactaacc cgctacagtc gaagccttga tcgggccgcg taccgcccca gacgtaaggc
    29401 ttgccaagct gttgctccag acggtgaatc gccacttcgg tgatgttatg cagatggtcg
    29461 ctgcttaaga aatggttgtt ttccgccagc gcctgccagc gtctgtcact cgccttgagc
    29521 ggcgcaggaa accattctgg atgctgtttt atctgttcgc ggttgtgctg gcgtagcgcc
    29581 cttctgcttt cggcattgcc ttccacaata tagctggcct gttttttcag atgggtttgg
    29641 tactgtttta ataaacgcgc acgattttgc atccgctggc gggcggcgta gctgaaagtg
    29701 atatgtgatg tggtggcgct ggcaaatgaa gaaaacggca agcaaagcaa cagtaatccc
    29761 gacaacacaa aagagggaat cgacggcaag gacatactca ataatggctg atcatgcatt
    29821 gatgttgcag tgtatcccgg ccc
//
LOCUS       DAPGWB010000044        29172 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.044, whole genome shotgun sequence.
ACCESSION   DAPGWB010000044 DAPGWB010000000
VERSION     DAPGWB010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 29172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29172
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.044"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..1188
                     /locus_tag="RHX79_001896"
     CDS             <1..1188
                     /locus_tag="RHX79_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
                     /protein_id="HDV2197079.1"
                     /translation="DVAVTESYKPVWDWKISQFNVSDIKFETMINPQFADRTYFSNCS
                     PVDPTSTRPTYFGDTDGSVGAVLYALFATGHLRIMAEGENFLSQLLNIEDEVLNVLLR
                     ENFNEQLDTNVNTIISILNRRDIVLESLQPYLVINKDAVTPCTFLGDQTGDRFSNICG
                     DQFIIDLLKRIMSINENVHVLAGNHETNCNGNYMQNFTRMKPLDEDTYAGIKDYPVCF
                     YDPKYKIMANHHGITFDEQRKRYIIGPITVSIDEMTNALDPVELAAIINKKHHAIING
                     KKFKTSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHNGNGGRERIGET
                     GTVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHEKNRNGLMPLIRRRTM
                     LQL"
     gene            1554..2621
                     /locus_tag="RHX79_001897"
     CDS             1554..2621
                     /locus_tag="RHX79_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDV2197080.1"
                     /translation="MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIE
                     ATEVDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVA
                     AAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHMRSRSLAQRGAISAQQLDDDRAAA
                     ESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPR
                     DGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAP
                     DLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGV
                     AWVRVNEELPWPDDLVVRLPQ"
     gene            2618..5353
                     /gene="rbbA"
                     /locus_tag="RHX79_001898"
     CDS             2618..5353
                     /gene="rbbA"
                     /locus_tag="RHX79_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated ATPase/putative transporter
                     RbbA"
                     /protein_id="HDV2197081.1"
                     /translation="MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLI
                     GPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPRHRRDVCPRIAWMPQGLGKNLYH
                     TLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCC
                     ALIHDPELLILDEPTTGVDPLSRAQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWL
                     VAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIA
                     IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAW
                     LFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMS
                     ERFKLNDVEDVLPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLM
                     VDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFI
                     AYLQEAAGQSNEAEAPPVIHDTTHAPRQGFSLRRLFSYSRREALELRRDPVRSTLALM
                     GTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDEL
                     DRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRAETVKGYVQAMHQSWL
                     QDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSALSVVR
                     EKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVFGVPHKGSFLTL
                     TLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDPVASLEGPGR
                     WIGEVYPTSHFLTIARGTFSKALDLTDLWQLFIPLLIAIPLVMGLSILLLKKQEG"
     gene            5353..6477
                     /locus_tag="RHX79_001899"
     CDS             5353..6477
                     /locus_tag="RHX79_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709253.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2197082.1"
                     /translation="MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTP
                     GSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIP
                     PNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVS
                     LETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPF
                     EIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIF
                     MGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAI
                     LYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA"
     gene            6550..6825
                     /locus_tag="RHX79_001900"
                     /pseudo
     CDS             6550..6825
                     /locus_tag="RHX79_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312384.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
     gene            6822..7181
                     /locus_tag="RHX79_001901"
     CDS             6822..7181
                     /locus_tag="RHX79_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDV2197083.1"
                     /translation="MIKLKTPNSMEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSD
                     SIQGLQKEGELSLREYLEDCKAAGIEPYARTEKIKTFTLRYPESLSERLNNAAAQQQV
                     SVNTYIIETLNERLNHL"
     gene            complement(7301..7702)
                     /gene="nikR"
                     /locus_tag="RHX79_001902"
     CDS             complement(7301..7702)
                     /gene="nikR"
                     /locus_tag="RHX79_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HDV2197084.1"
                     /translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA
                     TQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLK
                     GDMGDVQHFADDVIAQRGVRHGHLQCLPKED"
     gene            complement(7708..8514)
                     /gene="nikE"
                     /locus_tag="RHX79_001903"
     CDS             complement(7708..8514)
                     /gene="nikE"
                     /locus_tag="RHX79_001903"
                     /EC_number="7.2.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikE"
                     /protein_id="HDV2197085.1"
                     /translation="MTLLNVCGLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALL
                     GRSGCGKSTLARLLVGLESPSQGNISWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAV
                     NPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRV
                     CLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERF
                     CQRVMVMDNGQIVETQVVGDKLTFSSDAGRVLQNAVLPAFPVRRRTTEKV"
     gene            complement(8511..9275)
                     /gene="nikD"
                     /locus_tag="RHX79_001904"
     CDS             complement(8511..9275)
                     /gene="nikD"
                     /locus_tag="RHX79_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikD"
                     /protein_id="HDV2197086.1"
                     /translation="MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSL
                     TCAATLGILPAGVRQTAGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHA
                     RETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESP
                     FIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGK
                     IVEQGDVETLFNAPKHTVTRSLVSAHLALYGMELAS"
     gene            complement(9275..10108)
                     /gene="nikC"
                     /locus_tag="RHX79_001905"
     CDS             complement(9275..10108)
                     /gene="nikC"
                     /locus_tag="RHX79_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikC"
                     /protein_id="HDV2197087.1"
                     /translation="MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSR
                     LLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGR
                     VDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISL
                     RQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVT
                     APTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHA
                     H"
     gene            complement(10105..11049)
                     /gene="nikB"
                     /locus_tag="RHX79_001906"
     CDS             complement(10105..11049)
                     /gene="nikB"
                     /locus_tag="RHX79_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikB"
                     /protein_id="HDV2197088.1"
                     /translation="MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNL
                     PPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATL
                     ELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSV
                     YLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLND
                     KQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPV
                     IQCFTLMMVVVFVVCNLIVDLLNAALDPRIRRHEGAHA"
     gene            complement(11049..12623)
                     /gene="nikA"
                     /locus_tag="RHX79_001907"
     CDS             complement(11049..12623)
                     /gene="nikA"
                     /locus_tag="RHX79_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter, nickel/metallophore
                     periplasmic binding protein"
                     /protein_id="HDV2197089.1"
                     /translation="MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLY
                     TPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFD
                     AEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRP
                     FRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITF
                     NVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALN
                     TAKAPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPRQYDP
                     QKAKELLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGAD
                     VSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADK
                     PLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYA
                     PIATEIPFEQIKPVKP"
     gene            complement(12734..13321)
                     /gene="acpT"
                     /locus_tag="RHX79_001908"
     CDS             complement(12734..13321)
                     /gene="acpT"
                     /locus_tag="RHX79_001908"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase AcpT"
                     /protein_id="HDV2197090.1"
                     /translation="MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHT
                     LSPLPEIIYGEQGKPAFAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWR
                     WLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS
                     LSVSHCQLENLSLAICTPTPFTLTADSVQWIDSVN"
     gene            complement(13376..14425)
                     /locus_tag="RHX79_001909"
     CDS             complement(13376..14425)
                     /locus_tag="RHX79_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDV2197091.1"
                     /translation="METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFA
                     IVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELT
                     RKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVF
                     MLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELM
                     GVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIG
                     NILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKL
                     AILLGPGRPKSRLPG"
     gene            14557..15774
                     /locus_tag="RHX79_001910"
     CDS             14557..15774
                     /locus_tag="RHX79_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417930.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2197092.1"
                     /translation="MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYV
                     HDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLGYLT
                     AGLTASLPVISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
                     GAMAMGAPLGVVFYHWGGLQALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLG
                     RVWLYGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPNGIN
                     RIGGLNVAMICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVP
                     QQNQGAALATYTVFMDLSLGVTGPLAGLVMSWAGVPVIYLAAAGLVAIALLLTWRLKK
                     RPPEHVPEAASSS"
     gene            complement(15778..16335)
                     /gene="dcrB"
                     /locus_tag="RHX79_001911"
     CDS             complement(15778..16335)
                     /gene="dcrB"
                     /locus_tag="RHX79_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417929.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage sensitivity protein DcrB"
                     /protein_id="HDV2197093.1"
                     /translation="MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVN
                     LLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKR
                     LEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
                     ITLPADDQQKAQTTAENIINTLVIQ"
     gene            complement(16408..17073)
                     /locus_tag="RHX79_001912"
     CDS             complement(16408..17073)
                     /locus_tag="RHX79_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HDV2197094.1"
                     /translation="MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTW
                     GAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALA
                     HFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF
                     IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINAL
                     QAS"
     gene            17294..17539
                     /gene="tusA"
                     /locus_tag="RHX79_001913"
     CDS             17294..17539
                     /gene="tusA"
                     /locus_tag="RHX79_001913"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HDV2197095.1"
                     /translation="MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIAD
                     DPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG"
     gene            complement(17641..19839)
                     /gene="zntA"
                     /locus_tag="RHX79_001914"
     CDS             complement(17641..19839)
                     /gene="zntA"
                     /locus_tag="RHX79_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase
                     ZntA"
                     /protein_id="HDV2197096.1"
                     /translation="MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSTPTLSEN
                     VSGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVES
                     AVQKAGYSLRDEQAADEPQASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATT
                     LVGLYPIARQALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEG
                     WAASRARQGVSALMALKPETATRLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLL
                     SPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIE
                     EAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGC
                     PCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTLVAFDKTGTLTVGKPRVTA
                     IHPATGISESELLTLAAAVEQGATHPLAQAIVREAQVAALTIPAAESQRALVGSGIEA
                     QVNGEHVLICAAGKHPADAFAGLINELESAGQTVVLVVRNDDVLGIIALQDTLRADAA
                     TAISELNALGVKGVILTGDNPRAAAAIAGELGLEFKAGLLPEDKVKAVTKLNQHAPLA
                     MVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANI
                     RQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLLRRR"
     gene            complement(19913..20539)
                     /locus_tag="RHX79_001915"
     CDS             complement(19913..20539)
                     /locus_tag="RHX79_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HDV2197097.1"
                     /translation="MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQ
                     APMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSF
                     FWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
                     AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL"
     gene            20680..21039
                     /locus_tag="RHX79_001916"
     CDS             20680..21039
                     /locus_tag="RHX79_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HDV2197098.1"
                     /translation="MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVL
                     VSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDK
                     GTLSYKGTRFVSFVGEQ"
     gene            complement(21042..21311)
                     /locus_tag="RHX79_001917"
     CDS             complement(21042..21311)
                     /locus_tag="RHX79_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1145 family protein"
                     /protein_id="HDV2197099.1"
                     /translation="MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMH
                     GMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLVWQKKFKVKK"
     gene            complement(21301..21897)
                     /gene="rsmD"
                     /locus_tag="RHX79_001918"
     CDS             complement(21301..21897)
                     /gene="rsmD"
                     /locus_tag="RHX79_001918"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase"
                     /protein_id="HDV2197100.1"
                     /translation="MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLF
                     NWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGN
                     ARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV
                     ENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD"
     gene            22047..23543
                     /gene="ftsY"
                     /locus_tag="RHX79_001919"
     CDS             22047..23543
                     /gene="ftsY"
                     /locus_tag="RHX79_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDV2197101.1"
                     /translation="MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQTVVEEIVQAQEP
                     VKASEQAVEEQPQAHTEAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPEPVVEETP
                     EPVAIEREELPLPEDVNAEEVSPEEWQAEAETVEIVEAAEEEAAKEEITDEELEAQAL
                     AAEAAEEAVIVVPPAEEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISL
                     FRGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEM
                     GEILAKVDEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFR
                     AAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKS
                     HLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLD
                     GTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED"
     gene            23546..24214
                     /gene="ftsE"
                     /locus_tag="RHX79_001920"
     CDS             23546..24214
                     /gene="ftsE"
                     /locus_tag="RHX79_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HDV2197102.1"
                     /translation="MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTL
                     LKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAI
                     PLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLL
                     ADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGG
                     VGHE"
     gene            24207..25265
                     /gene="ftsX"
                     /locus_tag="RHX79_001921"
     CDS             24207..25265
                     /gene="ftsX"
                     /locus_tag="RHX79_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HDV2197103.1"
                     /translation="MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKP
                     VNRKTNVFNEQVRYAFHGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAA
                     TQYYPSPQITVYLQKTLDDDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGG
                     ALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALT
                     GLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGG
                     ALLGFSGALLSLILSEILVLRLSSAVAEVAQVFGTKFDINGLSFDECLLLLLVCSMIG
                     WVAAWLATVQHLRHFTPE"
     gene            25510..26364
                     /gene="rpoH"
                     /locus_tag="RHX79_001922"
     CDS             25510..26364
                     /gene="rpoH"
                     /locus_tag="RHX79_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HDV2197104.1"
                     /translation="MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYH
                     GDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLV
                     SFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARE
                     LGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWE
                     EQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMK
                     KLRAAIEA"
     gene            26635..27738
                     /gene="livJ"
                     /locus_tag="RHX79_001923"
     CDS             26635..27738
                     /gene="livJ"
                     /locus_tag="RHX79_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched chain amino acid ABC transporter
                     substrate-binding protein LivJ"
                     /protein_id="HDV2197105.1"
                     /translation="MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQ
                     EFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVK
                     PQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENID
                     FVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYD
                     QVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDT
                     VMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK"
     gene            27888..28154
                     /locus_tag="RHX79_001924"
     CDS             27888..28154
                     /locus_tag="RHX79_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HDV2197106.1"
                     /translation="MSAVKKQRIDLRLTDDDKSMIEEAAAISNQSVSQFMLNSASQRA
                     AEVIEQHRRVILNEESWTRVMDALSNPPSPGEKLKRAAKRLQGM"
     gene            28161..28688
                     /locus_tag="RHX79_001925"
     CDS             28161..28688
                     /locus_tag="RHX79_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV2197107.1"
                     /translation="MDDLTIEILTDDADYDLQRFDCGEEALNLFLTTHLVRQHRNKIL
                     RAYILCRNTPERQVLGYYTLCGSCFERAALPSKSKQKKIPYKNIPSVTLGRLAIDRSL
                     QGQGWGATLVAHAMKVVWSASLAVGIHGLFVEALNKKAHTFYQSLGFIPLVGENENAL
                     FFPTKSIELLFTQSD"
     gene            complement(28685..29068)
                     /gene="panM"
                     /locus_tag="RHX79_001926"
     CDS             complement(28685..29068)
                     /gene="panM"
                     /locus_tag="RHX79_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase autocleavage activator
                     PanM"
                     /protein_id="HDV2197108.1"
                     /translation="MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARF
                     NERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQYLLEEVLRNNPAVSCWWMADAGV
                     EDRGVMTAFMQALGFTAQQGGWEKR"
BASE COUNT         6975 a         7521 c         8051 g         6625 t
ORIGIN      
        1 gatgttgcag ttactgagtc gtacaaaccc gtctgggact ggaaaatatc gcaattcaat
       61 gtatctgata ttaaattcga aacaatgata aacccccagt tcgctgacag aacctatttc
      121 tccaattgtt cacctgttga tcccacaagt accagaccaa cctattttgg cgataccgat
      181 ggctcagtcg gtgcagtttt gtacgcgctt tttgcaacgg gacatttgag aatcatggct
      241 gaaggagaaa atttccttag ccagttgctt aatatagaag atgaagttct caacgtattg
      301 ctaagggaga actttaatga gcaacttgac actaatgtta atacaataat cagtattctg
      361 aacagaagag atatagtttt agaaagtctt cagccttatt tagttattaa taaagacgct
      421 gtgacgccat gtacgtttct tggcgaccaa accggcgatc gatttagtaa tatctgtggc
      481 gatcaattta tcatcgattt gttaaaacgc ataatgagta tcaatgaaaa tgttcatgta
      541 ttagctggaa atcatgaaac gaattgcaat ggtaactata tgcagaactt cacgcgtatg
      601 aaaccacttg atgaggatac ctacgctggg ataaaagatt atcctgtatg tttctatgac
      661 cccaaataca aaataatggc aaatcatcat gggataactt ttgatgagca gcgaaaacgt
      721 tacattatag gaccgataac agtctctatt gatgaaatga ccaatgctct cgatccggtc
      781 gaattagcgg caattatcaa taaaaagcat catgctataa ttaatggcaa aaagtttaaa
      841 actagccggg ctatctcttg tcgatccttt aatcgttatt tttctgtttc gacagattac
      901 agacctaaac ttgaagcact attagcatgt tcacaaatgt taggtataaa tcaagttgtt
      961 gcacataacg gaaatggtgg aagagaacgc ataggcgaaa cggggacagt tttaggtctt
     1021 aacgcccgtg acagtaaaca tgctggaaga atgttcagca tgcataattg ccaaattaac
     1081 cctggtgcag ggcctgagat aaccactccc tggaagtctt accagcatga aaaaaacaga
     1141 aatggactta tgcctttgat tagaaggcgc acaatgttac agctctgaac catagacaac
     1201 atgaatatta atgttactat ctggttgaga ctgttgataa aacgtaaaaa ggaatgctct
     1261 gttcctgcaa ctgaacaggc gtgaaacgcg atccaacagg atggataccg ttttgtcagc
     1321 cagttttata gatcacactt atgagtatgc gtgtttcatt tacggccagg aatgctgatg
     1381 atgacaacat tactacccgt tttcactaag ccttccccgt tggcgctcaa tgctctgcgc
     1441 gctggtcgta tttgtcgttt ccttcttatc ccggatggaa gaatccgctg aacgtcgttc
     1501 ggcggcagtt gtaacacgcg tcgtttgctt acagggatta tggcgggccg attatggata
     1561 agagtaagcg ccatctggcg tggtgggttg tcggggcact ggcggtggct gccgtcgtgg
     1621 cgtggtggct gttgcgcccg gcgggtgtgc cggaaggctt tgctgtcagc aatgggcgca
     1681 ttgaagcgac ggaagtggat atcgccagca aaattgccgg gcgtatcgac accattctgg
     1741 tgaaagaagg ccagtttgtt cgcgaaggtg aagtgctggc gaagatggat actcgcgtgt
     1801 tgcaggaaca gcgactggaa gccatcgcgc aaatcaaaga ggcacaaagc gccgttgccg
     1861 ccgcgcaggc tttgctggag caacgacaaa gcgaaactcg cgccgcgcag tcgctggtta
     1921 atcaacgcca ggcagaactg gactccgtag caaaacgtca tatgcgttcc cgttcactgg
     1981 cccaacgagg ggctatttct gcgcaacagc tggatgacga ccgcgccgcc gctgagagcg
     2041 cccgagctgc gctggaatcg gcaaaagctc aggtttctgc ttctaaagcc gctatagagg
     2101 cggcacgtac caatatcatt caggcgcaaa cccgcgtcga agcggcacaa gccactgaac
     2161 ggcgcattgc cgcagatatc gatgacagcg aactgaaagc cccgcgtgac ggacgcgtgc
     2221 agtatcgggt tgccgagcca ggggaagtgc tggcggcagg cggtcgggtg ctgaatatgg
     2281 tcgatctcag cgacgtctat atgaccttct tcctgccaac cgaacaggcg ggcacgctga
     2341 aactgggtgg tgaagcccgg ctgatcctcg atgccgcgcc agatctgcgt attccggcga
     2401 ccatcagttt tgtcgccagt gtcgcccagt tcacgccaaa aaccgtcgaa accagcgatg
     2461 aacggctgaa actgatgttc cgcgtcaaag cgcgtatccc accggaatta ctccagcagc
     2521 atctggaata tgtcaaaacc ggtttaccgg gcgtagcgtg ggtgcgggtg aatgaagaac
     2581 ttccgtggcc tgacgacctc gtggtgaggt tgccgcaatg acgcatctgg aactggttcc
     2641 cgtcccgcct gtcgcgcaac tggcgggcgt gagccagcat tatggaaaaa ccgttgcgct
     2701 gaacaatatt actctcgata ttccggcccg ctgtatggtc gggctgattg gtccggatgg
     2761 cgtcgggaag tcgagcttat tgtcgttgat ttccggtgcc cgcgtcattg agcagggcaa
     2821 tgtgatggtg ctgggcggcg atatgcgcga cccgaggcat cgccgcgacg tctgcccgcg
     2881 catcgcctgg atgccgcagg ggctgggcaa aaacctctac cacaccttgt cggtgtatga
     2941 aaacgtcgat tttttcgctc gcctgttcgg tcacgacaaa gcggagcggg aagtgcgaat
     3001 taatgagctg ctgaccagca cggggttagc accgtttcgc gatcgtccgg cagggaaact
     3061 ctccggcggg atgaagcaaa aacttgggct gtgctgcgcg ttaatccacg acccggaact
     3121 gttgatcctt gatgagccaa caacgggggt tgacccgctc tcccgcgccc agttctggga
     3181 tctgatcgac agtattcgcc agcggcagag caatatgagc gtgctggtcg ccaccgccta
     3241 tatggaagag gccgaacgct tcgactggct ggtagcgatg aatgccggag aagtgctggc
     3301 aactggcagc gccgaagagc tgcggcagca aacgcaaagc gccacgctgg aagaggcgtt
     3361 tataaatctg ttaccgcaag cgcaacgcca ggcgcatcag gcggtagtga tcccaccgta
     3421 tcaacctgaa aatgcagaga ttgccatcga agcgcgcgat ctgaccatgc gttttggttc
     3481 cttcgttgcc gttgatcacg tcaatttccg cattccacgc ggggagattt ttggttttct
     3541 tggatcgaac ggctgcggta aatccaccac catgaaaatg ctcaccggac tgctgcccgc
     3601 cagcgaaggt gaggcgtggc tgtttgggca accggttgat ccaaaagata tcgatacccg
     3661 ccgtcgggtg ggctatatgt cgcaggcgtt ttcgctctat aacgaactca ccgtgcggca
     3721 aaaccttgag ttacatgccc gtttgtttca catcccggaa gcggaaattc ccgcgcgagt
     3781 ggctgaaatg agcgagcgtt ttaagctcaa cgacgttgaa gatgttctgc cggagtcatt
     3841 gccgctcggc attcgccagc ggctttcgct ggcggtggcg gtgattcatc gcccggagat
     3901 gttaatcctc gatgaaccta cttctggcgt cgatccggtg gcgagggata tgttctggca
     3961 gttgatggtc gatctctcgc gccaggacaa agtaaccatt tttatctcca cccactttat
     4021 gaacgaagcg gaacgttgcg accgcatctc actgatgcac gccggaaaag tgctcgccag
     4081 cggtacaccg caggaactgg ttgagaaacg cggagccgcc agtctggaag aggcatttat
     4141 cgcctatttg caggaagcgg caggacagag caacgaagcc gaagcgccgc ccgtgataca
     4201 cgacaccacc cacgcgccgc gtcagggatt tagcctgcgc cgtctgttta gctacagccg
     4261 ccgcgaagca ctggaactgc gacgcgatcc ggtacgttcg acgctggcgc tgatgggaac
     4321 agtgatcctg atgctgataa tgggttacgg catcagtatg gatgtggaaa acctgcgctt
     4381 tgcggtgctc gaccgcgacc agaccgtcag tagccaggcg tggacgctca atctctccgg
     4441 ttcccgttac tttatcgaac agccgccgct caccagttat gacgagcttg atcgtcggat
     4501 gcgtgcgggc gatataacgg tggcaattga gatccctccc aatttcgggc gcgatatcgc
     4561 gcgtggtacg cctgtggaac tcggcgtctg gatcgacgga gcgatgccga gccgtgccga
     4621 aacggtaaaa ggttacgtgc aggcaatgca ccagagctgg ctacaggatg tggcgagccg
     4681 acaatccaca cccgccagcc aaagcgggct gatgaatatt gagacgcgct atcgctataa
     4741 cccggacgta aaaagcctgc cagcgattgt tccggcggtg atcccgcttc tgctgatgat
     4801 gatcccgtca atgctaagcg cccttagcgt ggtgcgggaa aaagagcttg ggtcgattat
     4861 caacctttac gtgaccccca ccacgcgtag tgaatttttg cttggtaaac agttgccata
     4921 catcgcgctg gggatgctga actttttcct gctctgcggc ctgtcggtgt ttgtgtttgg
     4981 cgtaccgcat aaaggcagtt tcctgacgct caccctggcg gcgctgctgt atatcatcat
     5041 tgccaccgga atggggctgc tgatctccac ctttatgaaa agccagattg ccgccatttt
     5101 cggaacggcg attatcacgt tgatcccggc gacacagttt tccgggatga tcgatccggt
     5161 agcttcgctg gaagggcctg gacgttggat cggcgaggtt tacccgacca gtcattttct
     5221 gactatcgcc cgcggaacgt tctcgaaagc gctggatctg actgatttgt ggcaactttt
     5281 tatcccgttg ctgatagcca tcccgctggt gatgggctta agtatcctgc tgctgaaaaa
     5341 acaggaggga tgatgcgcca tttacgcaat atttttaatc tgggtatcaa agagttgcgc
     5401 agtctgctcg gtgataaagc gatgctgacg ctgattgtct tctcgtttac ggtgtcggtg
     5461 tattcgtcag cgaccgttac gccaggatcg ttgaacctcg cgccgatcgc cattgccgat
     5521 atggatcaat cgcagttatc gaaccggatc gttaacagct tctatcgccc gtggtttttg
     5581 ccaccggaga tgatcaccgc cgatgagatg gatgccggac tggacgccgg acgttatacc
     5641 tttgcgataa atattccgcc taattttcag cgtgatgtcc tcgccggacg ccagccggat
     5701 attcaggtga acgtcgatgc cacgcgcatg agccaggcat ttaccggcaa tgggtatatc
     5761 cagaatatta tcaacggtga agtgaacagc tttgtcgcgc gctaccgtga taacagcgaa
     5821 ccgttggtat cgctggaaac ccggatgcgc tttaacccga accttgatcc cgcgtggttt
     5881 ggcggggtga tggcgatcat caacaacatt accatgctgg cgattgtatt gaccggatcg
     5941 gcgctgatcc gcgagcgtga acacggcacg gtggaacatt tactggtgat gccgataacg
     6001 ccgtttgaga tcatgatggc gaagatctgg tcgatggggc tggtggtgct ggtggtatcg
     6061 ggattatcgc tggtgctgat ggtaaaaggc gtgctgggcg taccgattga aggctcgatc
     6121 ccgctgttta tgctgggcgt ggcgctcagt ctgtttgcca ccacgtcaat cggcattttt
     6181 atggggacga tagcgcgttc aatgccgcaa ctggggctgc tggtgattct ggtgctgctg
     6241 ccgctgcaaa tgctttccgg tggttccacg ccgcgcgaaa gtatgccgca gatggtgcag
     6301 gacattatgc tgaccatgcc gacgacacac tttgttagcc tcgcgcaggc catcctctac
     6361 cggggtgccg gattcgaaat cgtctggccg cagttcctga cgctgatggc aattggcggc
     6421 gcgtttttca ccatcgcact gctgcgattc aggaagacga ttgggacaat ggcgtaagga
     6481 agggaaactt gacttcatac tgtgatgtca tactattgat gtcataaagt gaagtcataa
     6541 gggaatgtca tgtaaacaca ggtacaggct ttacgaaaga aacaaaaaaa cacactggat
     6601 cagctattta aatcaccttt acctcaagga atcaaatgga ctgatataga atctctggtt
     6661 aaagcgttag gcggagaaat taaggaaggt agggggtcgc gctgtaagtt catactaaat
     6721 atgagcgttg cgtgtttcca tcggcctcat ccgtcgccag ataccgataa aggcgctgta
     6781 gaaagcgtgc gtgactggtt actaagtata ggggtaaaac catgatcaaa ctgaagacgc
     6841 caaactctat ggagattgcc gggcaacctg ctgttatcac ttacgtgcca gaactgaatg
     6901 catttcgtgg caaattcctg ggcttgtcag gttattgtga ttttgtctct gacagcattc
     6961 aggggctgca aaaagaaggg gaactttccc tgcgagagta tcttgaggat tgtaaagctg
     7021 cgggtattga gccgtatgcg cgtacagaaa agattaagac ctttacgtta cgctatccag
     7081 aatcgctgag tgaacgcctt aataatgcgg ctgcgcagca acaagtctct gttaatacct
     7141 atattattga aacactgaat gagcgtttga atcatttata aattttagcg gcgtacatta
     7201 cgcagaatat ctgcctttac aggatctatc tatgcaactg aacttaattt tataaattaa
     7261 gttcagttaa tatcttttct ttcctcgttt cagaaataac tcaatcttcc ttcggcaggc
     7321 actgcaaatg cccgtgccgc acgccgcgct gggcgataac gtcatcggca aaatgctgca
     7381 cgtcgcccat atcacctttc agcacggcga tttccagaca gtcgtcgtga ttgatatgca
     7441 catgcagcgt ggcgacggag agatcgtggt gatggtgctg ggtggagaca atgcggctgg
     7501 ctaagtcgcg tttttcgtgt tcatacacat aggagagcac cgcgaaacct tgcgtgccgt
     7561 gctgctgagt ggcctcctgg gccagagcgc tacgcagaat atcgcggata gcttcggaac
     7621 gattgttata accacgacgc tggctcaggc tgtccagcgt ctccagtaaa tcgtcatcaa
     7681 gcgtgatggt gactcgttgc atttgcgtta aaccttttct gtggtgcgac ggcgcacggg
     7741 gaatgcgggt aataccgcgt tttgtagcac acgtccggcg tcagaggaaa aggttaattt
     7801 atctcccacc acctgggttt cgacgatttg tccgttgtcc atcaccatca cccgctgaca
     7861 gaagcgttcc accaggcgta agtcgtgggt gatgaacagg caggcggtgc caaactgttg
     7921 ttgtagcttt ttcagcaggc gaatgacgcc cgcctgtaac acgagatcaa ggttagaaac
     7981 tgcttcatcc agaatcagca gcttcggttc gaccgccagc gcgcgagcca ggcagacgcg
     8041 ctggagctgg ccgccgctta actgcggtgg gcgcttgtcg agcacgctgt cgtcgagatc
     8101 gaccgccttc agcatttcgc tggcgcgcgc cagttgttcg gattttttca gtgatagcag
     8161 gtggcgcatc ggttcacgca ggatctcgcg cacggttttg cgcggattca cggcgctgat
     8221 ggagtcctga aataccatct gaatatcgcg gcggaacgct ttacgctggg cgcgattgag
     8281 tttcgccagc ggttcgccgc gccagctaat attcccttgt gagggagact ctaagcctac
     8341 cagcagccgc gcgagggtgc tttttccgca gccgctgcgt cccagcaggg cgacggtttc
     8401 gccgcttttc agggtcaggg aaacgttatt cagcaccgcc tgatgttgat gttttccgct
     8461 aaatccaccg tgggcatagt gatgggaaag gccgcagacg ttaagtaagg tcatgatgcc
     8521 agctccatac cgtagagggc gagatgagcg gaaaccaggc tgcgcgtcac cgtatgtttg
     8581 ggggcgttaa acagcgtttc tacatcgccc tgttcgacaa ttttaccttg tgacatcacc
     8641 gccacgtcat ccgccagacg cgccacaacg cccatatcat gggtgaccag cagcattccc
     8701 ggcgcttgtt tttgcataat gctttccagc agatcgagga tgcgcgcctg tgctaccacg
     8761 tcgaggtcgg tggtcggttc atcggcgatg ataaacggtg attcacacag caccgccatc
     8821 gcaatcatca tgcgctgcaa catgccgccg ctcatctcga acgggtacag cttcagcacg
     8881 cgcgcggcgt tttccagccc caccgcttct atggcagcgg taagcgtagc gtcatcggcg
     8941 ggtttcccta acgccaggca ggtttcccgc gcgtgggtgt gcatggtgtg cagtggatta
     9001 aaggcgctgc gcgggttctg catgatggtg gcaattttga tgccgcgcag ggcgcaaggc
     9061 gaaaccggtt tgccatcggc taaaatttcc cccgccgtct ggcgaacgcc agcgggcaaa
     9121 atgcccagcg tcgcggcgca ggttaatgat ttcccgctgc cgctaccgcc gactaacgcc
     9181 agcacgcgcc cgcgttgcag ggttaacgat acaccgtgta ccagcggctg cgcggcctgt
     9241 agcgcgatat tacgtagttc aatctgttgc ggcattagtg tgcgtgctcc gtcaccagat
     9301 gaggatccag atgatcgcgc agtgcgtcac ccaccaggtt aaaggccatc acgctgataa
     9361 acagcgccag ccccggccag aacatttgca gcggctgggt ccagatatac tggcgcgcgt
     9421 cgttaatcat cacgccccat tcggcggtcg gcgcggtcac accgaggcca aggaaagaca
     9481 tccccgcgac gtgcagcatc atatggccga tatccagcgt tgccagcacc agcagcgaag
     9541 ggatcaccgc gcctgccaga tgatcgacaa acacccgcac atggcccgca ccggaaagcc
     9601 gtgacgccag cacaaactcg cgttggcgta gtgaaatcac caggctgcgc accatgcgtg
     9661 cataccacgc ccagtgcgac agggcgatgg cgataattac gttggtcagc ccggtgccga
     9721 gcacgccaac cataaagaac gacagaatcg aggtcgggaa ggtcataaac atatcggcga
     9781 cgcgcatggt ggcctgatca acgcgtccgc caatcagtcc ggcgctgccg ccaatcacca
     9841 gccctaatgt cagcaccagc agcaggcagg ccattaccga accgagcgac acgcgggtcg
     9901 ccgccatcag ccgcgagaaa atatcacgcc ctaagtgatc ggtgcccagc cagtgctgcg
     9961 catccggcga aagcaggcgc gacggcagat caatagcctg agggtcatac ggcagccacc
    10021 actggctggt aagcgcaatc agcgccagca gggcgataat gatcagcgcc aggcgtaccg
    10081 accagcggga agagaggaaa aagttcacgc gtgcgctcct tcatgacgac gaatgcgcgg
    10141 gtccagcgcg gcgttgagca aatcgacaat caaattacag accacaaaaa ccaccaccat
    10201 catcagcgta aagcactgga tcaccggata gtcacggtta aaaatcgccg acaccgcata
    10261 gcgcccgacg cccggccagg caaagatgtt ttcgataatc atcgtcccgc cgatcagttc
    10321 gccgatgtgc atccccacgg cggtgatcat cggcagcgag gcattgcgca ggatgtggcg
    10381 acgttcggtc tgtttgtcgt tcaggccgcg cagacgcgcc caggtgacgt gacgctgacc
    10441 ggcgacgtcc agcatactgg cgcgcagtaa acgcgcgtta atcgccagcg acataaaggc
    10501 aatggaaacc gcaggcaaaa tgatgtgctg ccagccgccg taacccatcg cgggtagcca
    10561 ttgcagatac accgaaaacg ccatcaccag taaaaacgcc agccagaagt taggcatcga
    10621 cacgccaaga aacgcgataa agcgcacggc gaaatccggc agacggtcgc ggtggcgcgc
    10681 cgcccagata ccgagcggta cggaagtgag cagaattaat accagcgccg cacctgcaag
    10741 ttccagcgtg gcgggcagga agttcagcat atcgtccagt accgggcgtt ggctggcgaa
    10801 tgagatacca aagtcaagat gcagcgcctt ccacaaccag gtgccgtact ggacgtacag
    10861 cggctgatcc agtcccagca tggtgcgggt agaggccagc atctccggcg tcggcggcag
    10921 gttagacaga cgcaaataat cgagcgccgg gtcgccggta ccgaggcgca gcatcagaaa
    10981 aatgatcacc gaggcggcga gcaccatcgg gatcagcagc agaaagcggc gtaatacgta
    11041 acgcaacatt aaggtttcac cggtttaatc tgttcgaacg gaatttcggt ggcgatcggc
    11101 gcgtagggga tattacccag ctccggtttt gataccacca tcatcgagat gtagctgata
    11161 ggcagataaa ccgcctcgtc atgcagacgg gtcagaatgt cgcgatacag cgcctgacgt
    11221 tgcgtttcgt catgggtcgc cagcacttcg ccgatctctt tatcaatcag cggcttatcg
    11281 gctaatcctt gctgtgcctg gaagtcagcg tgcgacggta cgcgcattga actcaggaag
    11341 gcgtgtggat cgtatggcgc gccccaggtg cggtggaaaa tcatgccaaa acgaccgtcg
    11401 cgctgacgag catagatact gctctcttct tcgccaatca gcgagacatc tgcgccaatc
    11461 tggcgcatat cagcctgaat gatttccgcc atcgatttgc ttaacgcatc ggtgccgatg
    11521 aacgacagtt caatgcgcag cggctgacca tttttctcgc ggatgtcttt gcccgcaggc
    11581 agcgtccaac cggctttttc cagcaactct ttcgctttct gcggatcgta ctggcgcggt
    11641 ttcaggccga gattagcgta aggcacagaa ggggcaaaca gggtgtcggc gacctgctgg
    11701 gtgccatata acgcgttatc aatcagcgat tttttgttta ccgcgtaatt aagagcttca
    11761 cgtactgcca gctcgttggt gggggctttg gcggtattga gcgccagcat cacggtttcg
    11821 atcggctgtg acagttgggt gtggtaagcc ggattctggc taaagcgggc gaaggtatcg
    11881 agcggtaata acccttcgtt tccgtacagc aggtcgatat cgccagtttc aaacgccacc
    11941 gcgcgggtag tcgggtccgg gatgacgtta aaggtgatct ttttaatcgc tggcttttcg
    12001 ccccagtagt tttcgttacg gacgaagaca tcgtactgat tcagtttcga ttcctgcaaa
    12061 atccacggtc cggtgccaat cggcgcttta attccgttca tggtttcatg gtttttaaac
    12121 tgcgagggag cgataaaacg gaaaggacgg ggcagggcca gttcttgcag gaaaggatag
    12181 taggcgcttt tcagggtaat ttgcagctct gttttactga gtgctttaac atcaacaatc
    12241 tggtttgcca gctccagcca ggcgtgacgt tgacggttat cgagcactgc gcggaagttt
    12301 tctgccgccg cctcggcatc gaacggttca ccgttggaga atttcacgtc atcacgcagg
    12361 gtgaaggtcc aggttttacc atcttctgaa tgagtccagc tttttgccag ccacgggatc
    12421 accgaaccgt ctgcctgata tttcaccaat ggttcataaa ccatgctctg ggcgaacatc
    12481 tggttaggcg tgtaaaggtg cgggtttagt ggcccgacat tcaccggcca ggcggtggtg
    12541 atttcatctg gtgcagcggc atggacgata aaagacgcac aagccagcag cgcaaataga
    12601 gtgcggcgga gtgtggagag catggtaacc ccaatggatt aaaatagatg gcggaaataa
    12661 gtatgacgat tttaagtatt cgtcatactg attacctgtt ctggatcaat agatgggcag
    12721 tcgggtgggc ggatcagtta actgaatcga tccattgcac actgtcggcg gtgagcgtaa
    12781 agggggtggg ggtgcagatc gccaggctta aattttcaag ctgacaatgg ctgactgaca
    12841 gcgaggagtg ataggtgctg tctacgctga cgatttgcca ggcgctgccg ccacgctgtt
    12901 taacgatggc ttctttgcgc gtccagatgc gccagaacat ttccagttgc tgatcaggat
    12961 gcacggcgtc catctcagcg tgttccccga ggctgaatac ggcgttcgcc agccagcgcc
    13021 agttggcgcg cgggcgaatc acttcgatat cgcagccgac ttcgccttca tcactcaaca
    13081 gcagagcgat atcgtcaccg ctatggctta agttgaacca tagcggcgtt tccggcgcga
    13141 atgcaggttt gccttgttcg ccatagatga tctccggtag cggggaaagc gtgtgcgaaa
    13201 gcaatgcacg ccccgccagc cagcgttcgc gtcgtggacc ttgcggtgct tgctcgcgta
    13261 aacccggtgg cagtggagct gcgcttaagg tcgaaacttt ccccagaact atccgataca
    13321 tatcagggcc aacgtttaat ggaaaatgaa agtgcgtatc gtatcacttg tcgcctcatc
    13381 ccggtaaccg acttttcggt ctgcctggtc ccagtaaaat cgccagtttg ctgccacctt
    13441 tcgtcgtttc catccagatt ttacacacgc tggttaatgg caccgaaagt agcatcccta
    13501 ccgggccgag cagccatccc cagattaaca atgaaagaaa taccaccatg gtggacatcc
    13561 ccaggcgatg gcccatcatc cgtggctcta aaatattgcc gatgaccata tggacaacta
    13621 aaaacaatgc gccgaccaga atacattcgt aaataccatt aaacagcagc acctgaatca
    13681 ttggcggtac ggcggaaatt accgcgccga tattgggcac gtagttaagc aaaaacgcca
    13741 gtactgccca catcagcgca aactgtaccc ccatcagctc cagccccagc cagacgatga
    13801 cacctgtcca taaactgagt agcgtcttca atgcaagata gtgcgaaacg cctttaagtg
    13861 cgcggtgtaa tcccgcgatg tgaatctgtg gattattcag cgcaaaacgc attttgtaag
    13921 ggacgtggcg cacttcaaac agcataaaaa ctacggtcat caccagcaaa agcacgctcg
    13981 ccattgcccc ggaaagcccg gtcattagcg ctgtggtgaa ggtaaccact ttttccgagt
    14041 ccatccgctg cagcattcgc tccggcgaca tatgcaaatt aagaaaaggc aacatctcct
    14101 gcaatttaaa aagtttgcgc gtcagctcct tattaaactt cggcagcata gagataaatt
    14161 cgttaaacga tgccgccagt acgccgacca gcgcggttag tgcgatcagc atcaccacca
    14221 ctacaatcgt aatggcaacg gggcgttgta ctccccgacg aataaaccag gtaacgagcg
    14281 ggttgaggac gatggcaaaa aacagcgcca gtaacagctg cacaatgata tctgccgctg
    14341 cgtgaatgcc cgcgaggatc actaccagcg aggccagctt gagcagaatg tgcatgcccg
    14401 ttttatcggg ttgaggggtt tccattgggg cttccttgtg actttttgta ttaagtgtag
    14461 cgggagtcac gccagcaata ttctgattct tactgctgat tttcacgtca gcacgtggta
    14521 aaaatgaaac actgttgtaa aaatgtggtg atcctcatgc ccgaacccgt agccgaaccc
    14581 gcgctaaacg gattgcgcct gaatttgcgc attgtctcca ttgtcatgtt taacttcgcc
    14641 agctacctca ccatcgggtt gccgctcgct gtattaccgg gctatgtcca tgatgtgatg
    14701 ggctttagcg ctttctgggc aggattggtt atcagcctgc aatatttcgc caccttgctg
    14761 agccgtcctc atgccggacg ttacgccgat ttgctgggcc ccaaaaagat tgtcgtcttc
    14821 ggtttatgcg gctgcttttt gagcggtctg ggatatctga cggcaggatt aaccgccagt
    14881 ctgcccgtca tcagcctgtt attactttgc ctgggacgcg tgatccttgg gattgggcaa
    14941 agttttgccg gaacgggatc gaccctgtgg ggcgttggcg tggttggctc gctgcatatc
    15001 gggcgagtga tttcgtggaa cggcattgtc acttacgggg cgatggcgat gggggcgccg
    15061 ttaggcgtcg tgttttatca ctggggcggc ttgcaggcgt tagcgttaat cattatgggc
    15121 gtggcgctgg tggccatttt gttggcgatc ccgcgtccga cggtaaaagc cagtaaaggc
    15181 aaaccgctgc cgtttcgcgc ggtgcttggg cgcgtctggc tgtacggtat ggcactggca
    15241 ctggcttccg ccggatttgg cgtcatcgcc acctttatca cgctgtttta tgacgctaaa
    15301 ggttgggacg gtgcggcttt cgcgctgacg ctgtttagct gtgcgtttgt cggtacgcgt
    15361 ttgttattcc ctaacggcat taaccgtatc ggcggcttaa acgtagcgat gatttgcttt
    15421 agcgttgaga taatcggcct gctactggtt ggcgtggcga ctatgccgtg gatggcgaaa
    15481 atcggcgtct tactggcggg ggcagggttt tcgctggtgt tcccggcatt gggtgtagtg
    15541 gcggtaaaag cggttccgca gcaaaatcag ggggcggcgc tggcaactta caccgtattt
    15601 atggatttat cgcttggcgt gactggacca ctggctgggc tggtgatgag ctgggcgggc
    15661 gtaccggtga tttatctggc ggcggcggga ctggtcgcaa tcgcgttatt actgacgtgg
    15721 cgattaaaaa aacggcctcc ggaacacgtc cctgaggccg cctcatcatc ttaaaactta
    15781 ctgaataacc agcgtattaa tgatgttttc tgcggtggtc tgcgcttttt gctgatcgtc
    15841 agcgggcagc gtaatttgca tggtcagcag ttgattaccc acgttaccca gaataacgga
    15901 agagtacgcc gtctggcctt tcgcggagat aatactgtct aactgctgca ttttgtgacc
    15961 tttcagctca atggctttat tggttaccac ttgcagctgc ggatcgcggc tacgttgctg
    16021 atcttccaga cgcttcgcca gcaccgccag atcttctttc ggatcatcgc ccatgatgac
    16081 gatgactgct ttctgcccgg tggcgtcgga ccagacatgc atgttattgg cctgcgttcc
    16141 cagcttaccg ctctggtcgg tcatatccgc tggcagcgag aaacttaact tgccatcaag
    16201 caggttgacg ggattcccgg tagcgttact ttccgcgacc gaaccctgcg ccgtagcgtt
    16261 agtgtcttta tcatcacagg ccgcaagccc cataaccagc aggccaattc cgacatattt
    16321 aaccagattg cgcattgact tcttcctttc gataaacggc cataacggct cattcatcca
    16381 tcttatcaca actctgataa cgaaccttta actcgcctgc aaagcgttga tttcggattt
    16441 atctgccagt cttttcaaca gcatattgag taatacgcca tacattggca ggaagaaaac
    16501 gatactgatt aacactttga aacagtaatc gaccagcgcg atttccatcc agtgttcagc
    16561 cataaaggca tccgggctac gccagaaggc aatgaagaaa aaggccagcg tgtcgctgac
    16621 gttaccgaac agtgtggacg ctgtcggtgc cagccaccag cggcgactct gacgcaggcg
    16681 gttaaaaacg tgcacgtcga ggatctgtcc cagcgcgtag gccatgaaac tggcggtggc
    16741 gatacgggcg acaaacaggt tgaagtgggc gagtgcgccg aatccctgcc atgaacccat
    16801 atagaacagc gacgagatga cataggagat taataacgca gggatcatta ccgcgaagat
    16861 aatgcgtcgg gccagcggtg cgccaaaaat acgcacggtc aggtcggtcg cgagaaagat
    16921 aaacggaaaa ctaaacgcgc cccaggtggt atgaaaacca aaaatggaga ccggaagctg
    16981 gaccagatag ttactggagg tgatcaccag cagatgaaat aacgataacc agaacaacgc
    17041 cttatagcgt tgagtttgcg agaaaacgtt catattgtac ctttttgatt aaccattggg
    17101 gtgagggaac ccaatacgta cgacacgtct gttatcttaa cataataacg tgcttaccct
    17161 tttttcgagc cgccgcatga tactgcttta cgttgacaat gcaatggtta attttcacgc
    17221 aatcgttaac ctggtttgct tacggactca cagggcgtaa actagcgccg tttttttaag
    17281 tgatgagaag aaaatgaccg atctcttttc cagccctgac cacacactcg acgcacttgg
    17341 cctgcgctgc ccggaaccgg tgatgatggt gcgcaaaact gtgcgcaata tgcagcctgg
    17401 cgaaacgttg ctgattatcg ccgacgatcc ggccactacc cgcgatattc ctgggttttg
    17461 tacctttatg gaacacgaac tggttgcgaa agagacggat ggactgcctt atcgttattt
    17521 gattcgtaaa ggcggttgat ggggaaagat tggcttcgat gccgcctttt cccctcaccc
    17581 taaccctctc cccagagggg cgaggggacc gatcgcgctc aatgttgcga tcggtttgcc
    17641 ttatctcctg cgcaacaatc ttaacgcatt cgctgtcacc agcaccgtcg cacccgtatc
    17701 tgccagcacc gccagccata gtccggtcat ccctaaaagc gtggtgacga ggaagatccc
    17761 tttcagcccc agcgcaatgg tgatgttctg gcggatattg gcgtgagtgg cgcgtgccag
    17821 ttcaatcatt tgcaccaggc cgcgcaggtg gttatgggtt aatgctgcat cagcggtttc
    17881 cagcgccacg tctgtgccac tgcccattgc aatcccaatg gcggcagctt tcatcgctgg
    17941 cgcgtcgtta ataccatcac cgaccatcgc caggggcgca tgttgattca gcttggtcac
    18001 cgctttgact ttatcttccg gcaataggcc cgctttaaac tccagcccca gctccccggc
    18061 gattgccgcc gctgcacgtg gattatcgcc ggtgaggatc actcctttga cccccagcgc
    18121 gttcagttca ctgatggcag ttgcagcatc ggcgcgcagg gtatcctgca atgcaatgat
    18181 acccagcacg tcatcgttac gtactaccag cactaccgtt tgcccggcgc tttccagttc
    18241 attaatcaaa ccagcaaatg catcagcggg atgtttccct gcagcgcata tcaacacgtg
    18301 ctcaccgtta acctgcgctt caatgccaga cccgaccagc gcccgctgtg actcggcggc
    18361 gggaatggtc agtgcagcaa cctgtgcttc tcgcacgatg gcctgcgcca gtggatgcgt
    18421 cgcgccttgc tcgaccgccg ccgccagtgt cagcagttca gattcactaa tacccgttgc
    18481 cggatgaatc gcggtaacgc gcggtttacc gacggtcagc gtaccggttt tatcaaacgc
    18541 caccagggta acacgaccca gttgttccag cgccgctccg cctttaatta acgccccacg
    18601 acgcgctgct gctgccagcc cggaggtaat cgccgcgggc gtggagataa ctaacgcgca
    18661 cgggcagcca atcagcagca gcgtcaggcc tttataaatc cactcctgcc agctggcggc
    18721 aaacagcagc ggcggcacca gcgttaccag cagggcgacg gccataatcg ctggcgtata
    18781 aatacggctg aaacggtcga taaaccgctc aatgggggcg cggcgctctt cggcttcttc
    18841 gatcagtttc agaatccggt caatggcgct ggcacccggt tctgacagca cttccagcgt
    18901 taccagacgg tctacgctgg tggctccagc agggacttta tcgcccgtcg cgcgctccac
    18961 cggaatggat tctccggtca gggcgctttc atcaaaactg gcaaacggtg agagcaattt
    19021 accgtcggca ggcaaacgcc cacctgcggc gacttcaatc acatcgccag ggcgcaggct
    19081 gttaatcgcc acctcttccc gctcaccgtt acgcaggcgc gtggcggttt ctggtttcag
    19141 cgccattaac gcgctgaccc cttgacgtgc gcggctggcg gcccagcctt ccagtcgttc
    19201 gccaatcaaa aacagcagca acaccatcgc agcttcagcc gttgcgccaa taaacagcgc
    19261 accaatagcg gctacgctca ttaacgtttc aatggcgaag tagctgccgg atttgatcaa
    19321 ccgtaatgcc tgacgagcaa tcgggtacag cccaaccagc gtggtcgcga taaacgccag
    19381 ttgcccgaac ggatgattga actgctccaa accccagctg attgccatca tcacgataag
    19441 cgtaatcagc ggcagattct ctttcaggcg cgatgcttgt ggctcgtcgg cggcctgctc
    19501 atcgcgcagg gaatagcccg ctttttgcac cgcagattca acctgggcac ggatgtcatt
    19561 gtcggcatca accaccagtt tttcggtggc gaacaacacc tgtacctgat tcacgcctgc
    19621 aagctggcgc acggcatttt ctaccttgcg cgcacaggcg gcgcagtcca tgccgctgac
    19681 tttccagcta tagcgggtgc cggagacgtt ttcagagaga gttggcgtgc tggaacatgc
    19741 gccgtcgcag caacagtcgt tggcgttctg taccgtggtt agcggtttga acgcagcaaa
    19801 ttgaggggct ttcttgccgt gattgtcagg agtcgacatg gcatcctccg gttaagtttt
    19861 ttctcattaa ccgaaggata cactctggag tcgactccag agtcaagttt tatcagagat
    19921 acagcgagcg gacgatcagg aagtgaccgg caaagtagca ggccgcagca atcgcgttat
    19981 ccgcacggaa gcgtcggcga tagtgactac ccagccagac aaagttactg ataaacagca
    20041 acgaagcgcc gacaaacgca gagagcgccg gagcggtcgg acggaagaac cacagttcac
    20101 ctgccagcca caccatcacc agcgtcatgc cgataaacgt gcagataggc caacgatact
    20161 cttccagccg cgtccagata atcgccagta acagcgcgcc cagaaccagc agcaccagtg
    20221 gcagaggcca gaagaaagag agcgtcatct gactggcgaa atagatggtg tacagcaggt
    20281 gcgagaggaa aaacgcgccg atggcgtaca tcagacgttg acgtggcaac agggttagcg
    20341 catcgcccag cagtgaggcg cacagccccg ccagcaccag atagctaatg gcgtcgaaca
    20401 tcggcgcttg ccaggccagt aacagcagga gaagaagggt taatggttta aatacccagc
    20461 gttgccaggt tggcccacga tacgatgcat ccacagatag ccatgcggaa agacagacag
    20521 cgataaacga ccaaagcatc ttagttcctt gaattcgtta ttttttcgta agcggaatgc
    20581 ctacggtctt gcttccagtt tagtggcgag ggtggacgga tgacaacacc ataactggca
    20641 gggtatgctt aattccgcat tttccgatga gggataaaga tgagcaaacc acctcttttc
    20701 tttattgtta tcattggctt aatcatcgtc gccgcatcgt ttcgttttat gcaacaacga
    20761 cgggaaaaag ctgataatga tatggcacca ctccagcaaa agctggtgtt ggtgagcaac
    20821 aagcgggaaa aaccgattaa cgatcgccgt tcgcgccagc aggaagtgac tccggcaggc
    20881 accagtatgc gctatgaggc aagcttcaaa ccgcaaagcg gaggaatgga gcagacgttt
    20941 cgcctcgacg cccagcagta ccacgccctg acagtgggcg ataaaggtac gctgagctat
    21001 aaaggaacgc gctttgtcag ctttgtaggc gaacaataag gttatttttt aactttaaat
    21061 ttcttctgcc agaccagcag ttcaaacacg ccgaaaagga aaatccgtac cttttcggcg
    21121 gtggtcatct gcgggccatc tttcggtaaa gtggatttca atagcgccag ctgcatacca
    21181 tgcatcagca cggtaaaaat cagcgccacg ttaacgaaaa tattcagcgg acgtgggaag
    21241 ggatgcacca ggttgaggat taaaaatccc caaacacaga gcattaacaa acgaccaata
    21301 ttaatcagca tcactttctc cttgtgcttc gcgttgatac agccgataag ccacctgacc
    21361 cgccactttt tcccgatgta atgaccagtt tgctggcaca gtgggcagac cgttttcgac
    21421 ttcgctttcg acataaatca gggcttcgtc agccagccag ccgttatctt ccagtaaatt
    21481 tatcgtctct tctaacaagc cacggcggaa cggtggatcg acaaacacga tattatgcgg
    21541 tgtgcctttt tgcgccagga atgacattgc gttgctgttc accacgcgtg cattgcctgc
    21601 ttttagtgtc gccagattct taattaactg ctgagaaacc gcgcgatcca tctcaatcaa
    21661 cgtggccccc gcagcatagc gcgacaacgc ttccagcccc agcgcgccgc tcccggcgaa
    21721 gcaatccaga cattgggcgt caacaatgac cggagccagc cagttaaaca acgtttcgcg
    21781 tacgcggtcg gtggtggggc gcagacctgg gctatcagga accgggagtt tacggcctcg
    21841 ccactgcccg ccaataatgc ggatttggcc gctgccggaa tgattcggtt ttttcatgat
    21901 aaattgctca atccgccaga taacacatac ttgcaggcgg tgatgtgaat taagttaagt
    21961 gatagactat ttcatcattt ttttagctgc tatgtacata gcgttaacgc tgtgccatga
    22021 agcaacagcg aggagtgtag tcgcaaatgg cgaaagaaaa aaaacgtggc tttttttcct
    22081 ggctgggctt tggtcaaaaa gagcagaccc cggaaaaaga gacagaagtt cagaatgaac
    22141 aaacggttgt agaagaaatc gttcaggcgc aagagcctgt gaaggcttct gaacaagccg
    22201 tcgaagagca gccgcaggcg catactgagg ccgaggcgga aacttttgct gccgacgttg
    22261 tggaagtcac tgaacaggtt gctgaaagtg aaaaagcgca gcctgaagcg gaagtcgttg
    22321 cacaaccgga accggtcgta gaagaaacgc cggagccagt ggctatcgaa cgtgaagagc
    22381 tgccgttgcc ggaagacgtc aacgccgaag aggtttcgcc agaagagtgg caggctgaag
    22441 cggaaaccgt agagattgtc gaagcggcgg aagaagaagc ggctaaagaa gaaatcaccg
    22501 acgaagagct ggaagcacag gcgctggctg ccgaagcggc agaagaagcg gtgatagtgg
    22561 ttcctccggc agaagaagag cagccggttg aagaaattgc ccaggagcag gaaaaaccga
    22621 ccaaagaagg tttcttcgcg cgcctgaaac gcagcctgtt aaaaaccaaa gaaaatctcg
    22681 gttccggatt tatcagcctg ttccgcggta aaaaaatcga cgatgatctg tttgaggagc
    22741 tggaagaaca gctgttgatc gccgatgtgg gcgtggaaac cacacgtaaa ataatcacca
    22801 atctgacgga aggcgcatcc cgcaagcagc ttcgtgatgc cgaggcgctc tatggcctgc
    22861 tgaaagaaga gatgggcgag attctggcga aagtcgatga gccgctgaat gttgaaggta
    22921 aaacgccgtt cgtgatcctg atggtgggcg tcaacggtgt gggtaaaacc acgacgattg
    22981 gtaagctggc gcgtcagttt gagcagcagg gtaaatcggt gatgctggcg gcgggcgata
    23041 ctttccgtgc agcagcggtt gaacagcttc aggtctgggg gcagcgcaac aatattccgg
    23101 tgattgccca gcataccggt gcggattccg cctctgttat cttcgacgcc attcaggccg
    23161 ctaaagcgcg taatatcgac gtcctgattg ccgataccgc cggacgcctg cagaacaaat
    23221 cgcacctgat ggaagagttg aagaaaatcg tccgcgtgat gaagaaactc gacgttgaag
    23281 cgccgcatga agttatgctg actatcgatg ccagcaccgg gcagaacgcg gtaagccagg
    23341 ccaaactgtt ccatgaagct gttggcttaa ccggcatcac gctaacgaaa ctggacggca
    23401 cggcgaaagg cggggtaatt ttctcggtgg ctgaccagtt tggtatccct atccgctaca
    23461 ttggtgtcgg cgaacgtatt gaggatttgc gtccgtttaa ggcggacgac tttatagagg
    23521 cactttttgc ccgagaggat taacaatgat tcgctttgaa catgtcagca aggcttatct
    23581 cggtgggaga caggcgctgc agggcgttac gttccatatg cagccgggtg agatggcgtt
    23641 tctgaccggt cattccggcg cagggaaaag taccctcctg aagctgatct gtgggattga
    23701 gcggcccagc gccgggaaaa tctggtttag cggccatgac atcacgcgtc tgaaaaaccg
    23761 tgaagttccg tttctgcgcc gccagattgg catgattttc caggatcacc atctactgat
    23821 ggaccgtact gtctacgata acgtggcgat cccgctgatt atcgctggtg ccagcggtga
    23881 cgatattcgt cgccgggtgt cggcggcact ggataaagtc gggctactgg acaaagcgaa
    23941 gaacttccct attcagcttt ccggcggtga acaacagcgt gttggcattg cccgcgcggt
    24001 ggtgaataag cccgcggtac tgctggcgga cgaaccgacc ggtaacctgg acgacgcgtt
    24061 gtcggaaggg attctacgtc tgtttgaaga gtttaaccgc gttggggtaa ccgtattgat
    24121 ggcaacgcac gacatcaacc tgatttcacg gcgttcctat cgcatgctca ccctgagcga
    24181 tggtcacttg catggaggcg tgggccatga ataagcgcga tgcaatcaat catattcggc
    24241 agtttggtgg gcgtctggat cgcttccgta aatcggtcgg cggctcaggc gacggcggtc
    24301 gtaacgcacc gaaacgcgcg aaatcctcgc caaaaccggt aaatcgcaaa accaacgttt
    24361 tcaacgaaca ggtgcgctat gccttccacg gcgcattgca ggatctgaaa agcaaaccgt
    24421 tcgccacgtt tttaacggtg atggttatcg ccatctccct gacgctgccc agcgtctgtt
    24481 atatggtgta caaaaacgtt aatcaggcgg cgacgcagta ttatccgtca ccgcaaatca
    24541 ctgtttactt gcaaaaaacg ctggacgatg acgccgctgc gggcgtggtg gcacagttgc
    24601 aggccgagca aggcgtggag aaagtgaact atctttctcg tgaagacgca ctgggcgagt
    24661 tccgtaactg gtctggtttt ggtggtgcgc tggatatgct ggaagaaaac ccgcttccgg
    24721 cagtggcggt ggtgatcccg aaactcgatt ttcaggggac ggaatcactc aatacgctgc
    24781 gtgatcgtat cacgcagatt aacggcattg acgaagtgcg gatggatgac agctggtttg
    24841 cccgtctggc ggcgttgacc gggctggtcg ggcgcgtttc ggcgatgatc ggcgtgttga
    24901 tggtggcggc agtgttcctc gtcatcggca acagcgtacg tctgagcatc tttgctcgcc
    24961 gtgactccat caacgtgcag aaactgattg gtgcgacgga tggtttcatc cttcgcccgt
    25021 tcctgtatgg tggcgcactg ctgggatttt ctggcgcatt gttgtcatta attttgtcag
    25081 aaattctggt gctgcgattg tcatcggcgg ttgcggaagt ggcacaggtt ttcggaacga
    25141 agtttgatat caatggttta tcgttcgatg aatgcctgct attgctgctg gtatgctcga
    25201 tgattggctg ggtggcagcg tggcttgcca cggtacaaca tttacgccac tttacgcctg
    25261 aataataaaa gcgtgttata ctctttccct gcaatgggtt ccgtagcagg gaaagagatc
    25321 ccgttgtctc ttcccggtat ttcatctcta tgtcacattt tgtgcgtaat ttattcacaa
    25381 gcttgcattg aacttgtgga taaaatcacg gtctgataaa acagtgaatg ataacctcgt
    25441 tgctcttaag ctctggcaca gttgttgcta ccactgaagc gccagaagat atcgattgag
    25501 aggatttgaa tgactgacaa aatgcaaagt ttagctttag ccccagttgg caacctggat
    25561 tcctacatcc gggcagctaa cgcgtggccg atgttgtcgg ctgacgagga gcgggcgctg
    25621 gctgaaaagc tgcattacca tggcgatctg gaagcagcta aaacgctgat cctgtctcac
    25681 ctgcggtttg ttgttcatat tgctcgtaat tatgcgggct atggcctgcc acaggcggat
    25741 ttgattcagg aaggtaacat cggcctgatg aaagcagtgc gccgtttcaa cccggaagtg
    25801 ggtgtgcgcc tggtctcctt cgccgttcac tggatcaaag cagagatcca cgaatacgtt
    25861 ctgcgtaact ggcgtatcgt caaagttgcg accaccaaag cgcagcgcaa actgttcttc
    25921 aacctgcgta aaactaagca gcgtctgggc tggtttaacc aggatgaagt cgaaatggtg
    25981 gcccgtgaac tgggcgtaac cagcaaagac gttcgtgaga tggaatcacg tatggcggca
    26041 caggacatga cctttgacct gtcttccgac gacgattccg acagccagcc gatggcaccg
    26101 gtgctctatc tgcaggataa atcatctaac tttgccgacg gcatcgaaga tgataactgg
    26161 gaagagcagg cggcaaaccg tctgaccgac gcgatgcaag gtctggacga acgcagccag
    26221 gacatcatcc gcgcgcgctg gctggacgaa gacaacaagt ccacgttgca ggaactggct
    26281 gaccgttacg gtgtttccgc tgaacgtgtg cgccaactgg aaaagaacgc gatgaaaaaa
    26341 cttcgcgccg ctattgaagc gtaatttccg ctattaagca gagaaccctg gatgagagtc
    26401 cggggttttt gttttttggg cctctacaat aatcaattcc ccctccggca aaacgtcaat
    26461 ccccacgcag attgttaata aactgtcaaa atagctattc caatatcata aaaatggggt
    26521 atgttttagc agagtatgct gctaaagcac gggtagtcat gcataaaacg aaataaagtg
    26581 ctgaatcaca acaccacaac acacgtaata accagaagaa tggggattct caggatgaac
    26641 ataaagggta aagcgttact ggcaggatgt atcgcgctgg cattcagcaa tatggctctg
    26701 gcagaagata ttaaagtcgc ggtcgtgggc gcaatgtccg gtccggttgc gcagtacggt
    26761 gaccaggagt ttaccggcgc agagcaggcg gttgcggata tcaacgctaa aggcggcatt
    26821 aaaggcaaca aactgcaaat cgtaaaatat gacgatgcct gtgacccgaa acaggcggtt
    26881 gcggtggcga acaaagtcgt taacgacggc attaaatatg tgattggtca cctctgttct
    26941 tcatcaacgc agcctgcgtc tgacatctac gaagacgaag gcattttaat gatcacccca
    27001 gcggcaaccg cgccggagct gaccgcccgt ggctatcagc tgatcctgcg caccaccggc
    27061 ctggactccg accaggggcc gacggcggcg aaatatattc ttgagaaagt gaaaccgcag
    27121 cgtattgcta tcgttcacga caaacagcaa tacggcgaag gtctggcacg agcggtgcag
    27181 gacggcctga agaaaggcaa tgctaacgtg gtgttctttg atggtatcac cgccggggaa
    27241 aaagatttct caacgctggt ggcgcgtctg aagaaagaga atatcgactt cgtttactac
    27301 ggtggttatc acccggaaat ggggcaaatc ctgcgtcagg cacgcgcggc ggggctgaaa
    27361 actcagttta tggggccgga aggtgtggct aacgtttcgc tgtctaacat tgcgggcgaa
    27421 tcagcggaag ggctgctggt gaccaagccg aagaactacg atcaggttcc ggcaaacaaa
    27481 cccattgttg acgcgatcaa agcgaaaaaa caggacccaa gcggcgcatt cgtctggacc
    27541 acctacgccg cgctgcaatc tttgcaggcg ggcctgaatc agtctgacga tccggctgaa
    27601 atcgccaaat acctgaaagc gaactcggtt gataccgtga tggggccgct gacgtgggat
    27661 gagaaaggcg atctgaaagg ctttgagttc ggcgtatttg actggcacgc caacggcacg
    27721 gcaaccgatg cgaagtaaca gatagataaa tgaaaatgcc cgatgcgctg aactgccatc
    27781 gggttttttt gtgtttgtcg aaatggttgt agaaagatta aacaatccag gatatgctta
    27841 atgtacggtg acataccgta catattatac ggagcaggag agttcacatg tctgctgtta
    27901 aaaagcagcg tatcgatctg cgtttaactg acgatgacaa aagtatgatt gaggaagcgg
    27961 cagcgatatc taatcagtcc gtcagccaat ttatgttgaa cagcgcttcg cagcgggctg
    28021 cggaagtgat tgaacagcat cggcgggtga tcctcaatga ggaatcctgg acgcgggtga
    28081 tggatgcgct gagtaatcca ccgtcacctg gtgaaaagct aaaacgtgcg gcaaaacgtc
    28141 ttcagggaat gtaataattt atggatgatc tgacgataga gattctgacc gatgatgcag
    28201 attatgatct acagcgattc gactgcggcg aggaagcgtt aaatctcttt ctgacgacac
    28261 atctcgttcg tcaacatcgc aacaaaattc tgcgagcgta tatcctttgt cgcaacactc
    28321 cagaacgtca ggtgctggga tattacacat tatgcggcag ttgttttgaa cgagccgcat
    28381 tgccctcgaa atcgaaacag aaaaaaattc cctacaaaaa tattcccagc gttactcttg
    28441 ggcgtctggc aattgatcgt tcattacagg ggcagggatg gggagcaaca ctggttgctc
    28501 atgccatgaa agtcgtctgg tcagcctctt tagcggtagg tattcacggt ctttttgtcg
    28561 aggcgctgaa taaaaaagcc catacgtttt atcaatcgct gggctttatc ccgttggtcg
    28621 gagaaaacga aaatgcgtta tttttcccaa ccaaatccat cgaactgctt ttcacacaga
    28681 gcgattaacg cttctcccag ccgccctgtt gcgccgtaaa tcccagcgcc tgcataaacg
    28741 ccgtcatcac accgcgatct tccacgcctg catccgccat ccaccagcat gaaacggcag
    28801 gattgttacg caaaacctct tccagcagat attgccccac accgcgacgg cgggtgactt
    28861 cccgcacgcg cagggaatcc agtgctccct cggtgccgct taaggttacc cgcacggccg
    28921 ctagcaggcg ctcgttaaaa cgcgcggcgt agatgcggtg gttatcgtca acctgtaaag
    28981 aggaagggga atactccggc cagatctttt gcaggtcaat ccggtcctgg tcgctaaagt
    29041 tttctaatcg aatgatggtc agcttcatgg gtaacccgtg taaatcacaa aagtggaacc
    29101 agtgtagcga aataatttaa tcggaggctt tctctttttt atttcttttg gcaggtgatt
    29161 aattttttaa ca
//
LOCUS       DAPGWB010000045        29145 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.045, whole genome shotgun sequence.
ACCESSION   DAPGWB010000045 DAPGWB010000000
VERSION     DAPGWB010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 29145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29145
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.045"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(164..1639)
                     /gene="ampG"
                     /locus_tag="RHX79_001927"
     CDS             complement(164..1639)
                     /gene="ampG"
                     /locus_tag="RHX79_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muropeptide MFS transporter AmpG"
                     /protein_id="HDV2197109.1"
                     /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI
                     DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFFE
                     PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG
                     GLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDF
                     FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA
                     LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT
                     SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAA
                     VPGLILLLVCRQTLEYTRVNDNFISRTEYPAGYAFAMWTLAAGVSLLAVWLLLLTMDA
                     LDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT"
     gene            complement(1683..2261)
                     /locus_tag="RHX79_001928"
     CDS             complement(1683..2261)
                     /locus_tag="RHX79_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV2197110.1"
                     /translation="MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVT
                     VSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVN
                     LQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNK
                     NIADAVNSVLTDTIADMSQDTSIHEFIKQNAR"
     gene            2566..2883
                     /gene="bolA"
                     /locus_tag="RHX79_001929"
     CDS             2566..2883
                     /gene="bolA"
                     /locus_tag="RHX79_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator BolA"
                     /protein_id="HDV2197111.1"
                     /translation="MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLV
                     SDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAG
                     SIA"
     gene            3227..4525
                     /gene="tig"
                     /locus_tag="RHX79_001930"
     CDS             3227..4525
                     /gene="tig"
                     /locus_tag="RHX79_001930"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDV2197112.1"
                     /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF
                     RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGED
                     FTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEA
                     EDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP
                     EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMER
                     ELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPR
                     ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK
                     ELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA"
     gene            4771..5394
                     /gene="clpP"
                     /locus_tag="RHX79_001931"
     CDS             4771..5394
                     /gene="clpP"
                     /locus_tag="RHX79_001931"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006809880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDV2197113.1"
                     /translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF
                     LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS
                     TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK
                     GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
     gene            5520..6794
                     /gene="clpX"
                     /locus_tag="RHX79_001932"
     CDS             5520..6794
                     /gene="clpX"
                     /locus_tag="RHX79_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HDV2197114.1"
                     /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC
                     NDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG
                     DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
                     IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKA
                     KSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT
                     KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMED
                     VEKVVIDESVIDGQSKPLLIYGKPEAQQASGE"
     gene            6982..9336
                     /gene="lon"
                     /locus_tag="RHX79_001933"
     CDS             6982..9336
                     /gene="lon"
                     /locus_tag="RHX79_001933"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001469947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDV2197115.1"
                     /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM
                     DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA
                     LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID
                     DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK
                     KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ
                     KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI
                     LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR
                     GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV
                     AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP
                     KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLK
                     HIEINGDNLHDYLGVQRFDYGRADNENRVGQVTGLAWTEVGGDLLTIETACVPGKGKL
                     TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI
                     AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN
                     KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK"
     gene            9545..9817
                     /gene="hupB"
                     /locus_tag="RHX79_001934"
     CDS             9545..9817
                     /gene="hupB"
                     /locus_tag="RHX79_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-beta"
                     /protein_id="HDV2197116.1"
                     /translation="MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL
                     VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
     gene            10009..11880
                     /gene="ppiD"
                     /locus_tag="RHX79_001935"
     CDS             10009..11880
                     /gene="ppiD"
                     /locus_tag="RHX79_001935"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV2197117.1"
                     /translation="MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAK
                     VNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLD
                     QYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQL
                     TTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYY
                     EQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT
                     KTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKE
                     KGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVS
                     DAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPG
                     INSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLV
                     DLKAGKGAEAMQAAGLKFGEPKILSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGN
                     VVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
     gene            12031..12402
                     /locus_tag="RHX79_001936"
     CDS             12031..12402
                     /locus_tag="RHX79_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HDV2197118.1"
                     /translation="MKHGIKALLITLSLACAGMSHSALAAAPAAKPTTVETKAEAPAA
                     QSKAAVLAKASDEEGTRVSINNASAEELARVMNGVGLKKAQAIVSYREEYGPFKTVED
                     LKQVPGMGNSLVERNLAVLTL"
     gene            12508..12906
                     /gene="fadM"
                     /locus_tag="RHX79_001937"
     CDS             12508..12906
                     /gene="fadM"
                     /locus_tag="RHX79_001937"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain acyl-CoA thioesterase FadM"
                     /protein_id="HDV2197119.1"
                     /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWM
                     TAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADA
                     LITFVCIDLKTQKALALEGELREKLEQMVK"
     gene            complement(12958..13653)
                     /gene="queC"
                     /locus_tag="RHX79_001938"
     CDS             complement(12958..13653)
                     /gene="queC"
                     /locus_tag="RHX79_001938"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDV2197120.1"
                     /translation="MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEID
                     VARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNIL
                     FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPL
                     MWIDKAETWALADYYGKLDLVRNETLTCYNGIKGDGCSHCAACNLRANGLNHYLADKP
                     TVMAAMKQKTGLR"
     gene            complement(13718..15418)
                     /locus_tag="RHX79_001939"
     CDS             complement(13718..15418)
                     /locus_tag="RHX79_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
                     /protein_id="HDV2197121.1"
                     /translation="MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLL
                     RQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPG
                     ELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
                     NTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQ
                     LFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTT
                     ELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQV
                     SSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWT
                     IPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTT
                     LLAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQVMPDEE
                     NRFNALKAVFSQLMTDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ
                     "
     gene            15518..16336
                     /gene="cof"
                     /locus_tag="RHX79_001940"
     CDS             15518..16336
                     /gene="cof"
                     /locus_tag="RHX79_001940"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HMP-PP phosphatase"
                     /protein_id="HDV2197122.1"
                     /translation="MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGR
                     HALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASM
                     HIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQI
                     QLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDRE
                     MLGCVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE"
     gene            16489..16947
                     /gene="decR"
                     /locus_tag="RHX79_001941"
     CDS             16489..16947
                     /gene="decR"
                     /locus_tag="RHX79_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator DecR"
                     /protein_id="HDV2197123.1"
                     /translation="MLDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLED
                     DGILIGKVALLDPEKIGLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGE
                     YDYLMRVQVADMKRYDEFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE"
     gene            16977..18749
                     /locus_tag="RHX79_001942"
     CDS             16977..18749
                     /locus_tag="RHX79_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HDV2197124.1"
                     /translation="MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVD
                     GVTEQHFTTGQILMWIATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSR
                     QHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQL
                     TLFALLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR
                     QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQ
                     LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGE
                     LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGD
                     IRFHDIPLTKLQLDSWRSRLAVVSQAPFLFSDTVANNIALGCPNATQQEIEHVARLAS
                     VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTE
                     HQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHGHIAQRGNHDVLAQQSGWYRD
                     MYRYQQLEAALDDAPENREEAVDA"
     gene            18742..20523
                     /locus_tag="RHX79_001943"
     CDS             18742..20523
                     /locus_tag="RHX79_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdB family multidrug efflux ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HDV2197125.1"
                     /translation="MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPL
                     LISYFIDNMVAKNNLPLKMVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRT
                     DVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSTALVGAMLVAM
                     FSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQ
                     QFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSAS
                     GTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDY
                     PLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYP
                     LTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQAL
                     ETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASID
                     SGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQG
                     RYWQMYQLQLAGEELAASVREEESLSA"
     gene            20704..21042
                     /gene="glnK"
                     /locus_tag="RHX79_001944"
     CDS             20704..21042
                     /gene="glnK"
                     /locus_tag="RHX79_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HDV2197126.1"
                     /translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE
                     LYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI
                     RTGEADEAAL"
     gene            21072..22358
                     /gene="amtB"
                     /locus_tag="RHX79_001945"
     CDS             21072..22358
                     /gene="amtB"
                     /locus_tag="RHX79_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter AmtB"
                     /protein_id="HDV2197127.1"
                     /translation="MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLF
                     MTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNNFFGNVNW
                     LMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL
                     SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH
                     NLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRG
                     KPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPC
                     DVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVA
                     FIGYKLADLTVGLRVPEEQEREGLDVNSHGENAYNA"
     gene            complement(22407..23267)
                     /gene="tesB"
                     /locus_tag="RHX79_001946"
     CDS             complement(22407..23267)
                     /gene="tesB"
                     /locus_tag="RHX79_001946"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HDV2197128.1"
                     /translation="MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQAL
                     YAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIF
                     YMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEV
                     RPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIG
                     FLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVAST
                     VQEGVMRNHN"
     gene            23485..24057
                     /locus_tag="RHX79_001947"
     CDS             23485..24057
                     /locus_tag="RHX79_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaY family lipoprotein"
                     /protein_id="HDV2197129.1"
                     /translation="MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPA
                     IQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFV
                     LPFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPV
                     QASGGATTTVPSTSPTQVNPSSAVPAPTQY"
     gene            complement(24088..24399)
                     /locus_tag="RHX79_001948"
     CDS             complement(24088..24399)
                     /locus_tag="RHX79_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HDV2197130.1"
                     /translation="MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGG
                     VLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWN
                     Y"
     gene            24562..24658
                     /gene="ffs"
                     /locus_tag="RHX79_001949"
     ncRNA           24562..24658
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="RHX79_001949"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            24778..25131
                     /locus_tag="RHX79_001950"
     CDS             24778..25131
                     /locus_tag="RHX79_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HDV2197131.1"
                     /translation="MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS
                     DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFD
                     GKRMIYGGFESIIDE"
     gene            complement(25173..26723)
                     /gene="pdeB"
                     /locus_tag="RHX79_001951"
     CDS             complement(25173..26723)
                     /gene="pdeB"
                     /locus_tag="RHX79_001951"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeB"
                     /protein_id="HDV2197132.1"
                     /translation="MRTRHLVGLILGVLILSVLLPVGLSIWLAHQQVETSFIEELDTY
                     SSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNV
                     PQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPAS
                     FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP
                     FPEMNISIITWASTKMLQKGWHRQVFIWFPLGLVIGLLAAMFVLRILRRIQSPHHRLQ
                     DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL
                     TLLIIRSVFEDMGDWLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIAL
                     ELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD
                     ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF
                     LRWAEQHL"
     gene            complement(26887..27357)
                     /locus_tag="RHX79_001952"
     CDS             complement(26887..27357)
                     /locus_tag="RHX79_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaC family protein"
                     /protein_id="HDV2197133.1"
                     /translation="MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYV
                     AFFATLAVMLQSETLSGSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGE
                     WYNTRFVPAALVEAILNSPRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS"
     gene            complement(27473..28024)
                     /gene="maa"
                     /locus_tag="RHX79_001953"
     CDS             complement(27473..28024)
                     /gene="maa"
                     /locus_tag="RHX79_001953"
                     /EC_number="2.3.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose O-acetyltransferase"
                     /protein_id="HDV2197134.1"
                     /translation="MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSQAEEHT
                     LRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCML
                     APGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGA
                     VVTKDVPDNVVVGGNPARIIKKL"
     gene            complement(28195..28413)
                     /gene="hha"
                     /locus_tag="RHX79_001954"
     CDS             complement(28195..28413)
                     /gene="hha"
                     /locus_tag="RHX79_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HDV2197135.1"
                     /translation="MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY
                     SAADHRLAELTMNKLYDKIPSSVWKFIR"
     gene            complement(28439..28813)
                     /gene="tomB"
                     /locus_tag="RHX79_001955"
     CDS             complement(28439..28813)
                     /gene="tomB"
                     /locus_tag="RHX79_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hha toxicity modulator TomB"
                     /protein_id="HDV2197136.1"
                     /translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAI
                     NLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRK
                     SGNRLFRCFVNATKENPASLSC"
BASE COUNT         7330 a         6994 c         7851 g         6970 t
ORIGIN      
        1 ctcattagct gaatcgtgta agaaaaatag aatttataaa tggcgccaat aatttccaaa
       61 cgctaagccg cacaaaagaa caaatattaa taagcgatgc tgatgtttat ttagccgtaa
      121 taattacggc gagtgattac tacagctaaa taatatttac agattacgtc agatgcgttt
      181 ttcgtagcgc cagataatcc agcaaaccac caagcacgac gccagaaagg gcgactaaaa
      241 ccccgacttc cagcagagca ggcaggaaag agaagtgcgt caaatccagc gcgtccatcg
      301 tcaacagcag taaccacacg gccaacaggc tgacgcccgc cgccagtgtc cacatggcaa
      361 aggcataacc tgccggatat tcggtacggg agataaagtt gtcatttact cgtgtatatt
      421 caagcgtctg gcggcaaacc agcagcaaaa taagccccgg tacggcagcg gcgacggaga
      481 atagatagaa tgtcgaccag ccgtgtgctt caacaaacca acccgccacg gggccgacat
      541 aaactcgccc tacagcggaa agcgctgaga gcagggcaaa ttgagtagcg gaaaatgact
      601 tattacacag cgtcattaac agcgcgacaa aggctgatgt gcccatcccg ccacagaggt
      661 tttcgaaaaa tacggctgcg cccatgctgt agagatgctt atcagtaatc gacagcagcc
      721 agtaaccagc gttagacgca ccttgtaaaa tgccgaaaat cagcagcgcc cggaacagcg
      781 acaggcgctg catcaaaatc ccaccgtaca atgcgccaac aatggtcgcc agtaagccaa
      841 gcgttttgtt taccacgcct acttcacccg catcaaaccc gacgccgcga atcaaaaacg
      901 tggttgtcag gctcatggcg aatgcgtcgc ccagcttata cagcacgata agaagcaaaa
      961 taagccaggc attattgcga ccaaagaaat ctcgcagagg tgcaacaacc gcttgttcca
     1021 gcgttttggg cacaggaatg gtgtcggttg gttctggtgc aagcaacgtc gcgataatac
     1081 aggggatcaa cagcgccgcc atcaaccagt acatgccctg ccagcccagc catttatctg
     1141 ccagccacag ggctaggccg ccggaaacca gcatccctaa acggtaaccc agcacgctga
     1201 ttgccgcgcc cgcaccacgt tcttctgccg ggagcacatc ggttttccac gcatcgaaga
     1261 caatatcctg ggaggcagag caaaaagcga tcaccaccgc cagcgccgcc atccagcgga
     1321 gttgggtgcc tggttcgaaa aaacccatcg ccgcaatggc gactaataac aggatttgcg
     1381 tggcgagcag ccaaccgcgc cgccgcccaa aaaatggggg cgtgtagcgg tccatcagcg
     1441 gtgaccagag gaatttaaaa acgtaagcct ggcctaccag agagaagaaa ccaatggttt
     1501 tgagatcgat attctcgacc gtcatccagg cctgtaaggt gccggatgtc agggcgagcg
     1561 gtagcccgga agcaaaaccc aggatcagca atatggctga acgcggctgt tgaaaaatac
     1621 gtaaatattg actggacatg ggcgtctaca ggcccggctt gcaccgggcc cgagggcaga
     1681 aattaacgcg cgttctgctt gatgaattcg tggatgctgg tgtcctgaga catatcagcg
     1741 atggtatcgg tcagcacact gttaaccgca tcggcgatat ttttgttgga ggcctggaac
     1801 gcaccttcaa cgttgtagct ggcacgatag tttttggtca ttttgttgcc attctgcgcg
     1861 gtagcgatga tggcgatatc cgctttggtg gcgatgttgt agcgcacgtt gccctgggac
     1921 acgtcagcat acagttggct aacgatgatt tgcagattaa ccgggccatt cggaccaacc
     1981 atgtaaccac gcgcggtcat ctgtttttcc agcacttctt gcagcaggaa acgcagatct
     2041 cgggaggcgg tcagggtaac gatttgatta tcgcgggtga cttttgccag cgcctgatcg
     2101 gtacgctgat cggcaccatt aatgcttacg gtgacgccca tcaggcttgg atcctgctgt
     2161 ggcagtgtaa tcgtcgggga aacttcaata gttgttggcg gttttgcgca tcctgcaagc
     2221 ataaacagag caactaacgg gaagaggatt tttttgaaca tgttcgggct ctcagagact
     2281 cttaagcgtg tttggtaaaa attcccgcca tcataacatt gccaacggcg aggggaagtg
     2341 ggtaaggcat gtaaattcat catgttgacg aaataatcac ccctggtaaa agaaacgctg
     2401 atgcgaggcc tgtgtttcaa tctttaaatc agtaaacttc atacgcttga cggaaaaacc
     2461 aggacgaaac ctaaatattt gttgttaagc tgcaatggaa acggtaaaag cggctagtat
     2521 ttaaagggat ggatgacatc tcagcgttgt cggaggagat atttcatgat gatacgtgag
     2581 cggatagaag aaaaattaag ggcggcgttc caacccgtat tcctcgaagt agtggatgaa
     2641 agctatcgtc acaatgtccc agccggctct gaaagccatt ttaaagttgt gctggtcagc
     2701 gatcgtttta cgggtgaacg ttttctgaat cgtcatcgaa tgatttacag tactttagcg
     2761 gaggaactct ctactaccgt tcatgcgctg gctctgcata cttacactat taaggagtgg
     2821 gaagggttgc aggacaccgt ctttgcctct cctccctgtc gtggagcagg aagcatcgcg
     2881 taaaaacgca tttgcaactg tcggcgcttt tccagtatgt tgctaaagat tttatgaaaa
     2941 acggcctgcg ggccgttttg ttttgtctgg attttgcgct ttttgcccag cattcagacg
     3001 aaaattgccc gggaattgtg aaaaaatacg cgacagcgcg caataaccgt tctcgactca
     3061 taaaagtgat gccgctataa tgccgcgtcc tatttgaatg ctttcgggat gattctggta
     3121 acagggaatg tgattgatta taagaacatc ccggttccgc gaagccaaca acctgtgctt
     3181 gcggggtaag agttgaccga gcactgtgat tttttgaggt aacaagatgc aagtttcagt
     3241 tgaaaccact caaggccttg gccgccgtgt aacgattact atcgctgctg acagcatcga
     3301 gaccgctgtt aaaagcgagc tggtcaacgt tgcgaaaaaa gtacgtattg acggcttccg
     3361 caaaggcaaa gtgccaatga atatcgttgc tcagcgttat ggcgcgtctg tacgccagga
     3421 cgttctgggt gacctgatga gccgtaactt cattgacgcc atcattaaag aaaaaatcaa
     3481 tccggctggc gcaccgactt atgttccggg cgaatacaag ctgggtgaag acttcaccta
     3541 ctctgtagag tttgaagttt atccggaagt tgaactgcag ggtctggaag cgatcgaagt
     3601 tgaaaaaccg atcgttgaag tgaccgatgc tgacgttgac ggcatgctgg atactctgcg
     3661 taaacagcag gcaacctgga aagaaaaaga cggcgctgtt gaagcagaag accgcgtaac
     3721 catcgacttc accggttctg tagacggcga agagttcgaa ggcggtaaag cgtctgattt
     3781 cgtactggcg atgggccagg gtcgtatgat cccgggcttt gaagacggta tcaaaggcca
     3841 caaagctggc gaagagttca ccatcgacgt gaccttcccg gaagaatacc acgcagaaaa
     3901 cctgaaaggt aaagcagcga aattcgctat caacctgaag aaagttgaag agcgtgaact
     3961 gccggaactg actgcagaat tcatcaaacg tttcggcgtt gaagatggtt ccgtagaagg
     4021 tctgcgcgct gaagtgcgta aaaacatgga gcgcgagctg aagagcgcca tccgtaaccg
     4081 cgttaagtct caggcgatcg aaggtctggt aaaagctaac gacatcgacg taccggctgc
     4141 gctgatcgac agcgaaatcg acgttctgcg tcgccaggct gcacagcgtt tcggtggcaa
     4201 cgaaaaacaa gctctggaac tgccgcgcga actgttcgaa gaacaggcta aacgtcgcgt
     4261 agttgttggc ctgctgctgg gcgaagttat ccgcaccaac gagctgaaag ctgacgaaga
     4321 gcgcgtgaaa ggcctgatcg aagagatggc ttctgcgtac gaagatccga aagaagttat
     4381 cgagttctac agcaaaaaca aagaactgat ggacaacatg cgcaatgttg ctctggaaga
     4441 acaggctgtt gaagctgtac tggcgaaagc gaaagtgact gaaaaagaaa ccactttcaa
     4501 cgagctgatg aaccagcagg cgtaatttac gcagcataac gcgctaaatt cgcacaaagg
     4561 cccgtcaccg ccaggtggtg ggcttttttt tgtcatgaat tttgcatgga accgtgcgaa
     4621 aagcctcttt cggtgttagc gtaacaacaa aagattgtta tgcttgaaat atggtgatgc
     4681 cgtacccata acacagggac tagctgataa tccgtccata aggttacaat cggtacagca
     4741 ggttttttca attttatcca ggagacggaa atgtcataca gcggcgaacg agataacttt
     4801 gcaccccata tggcgctggt gccgatggtc attgaacaga cctcacgtgg tgagcgctct
     4861 tttgatatct attctcgtct acttaaggaa cgcgtcattt ttctgactgg ccaggttgaa
     4921 gaccacatgg ctaacctgat tgtggcgcag atgctgttcc tggaagcaga aaacccagaa
     4981 aaagatatct atctgtacat taactcccca ggcggggtga tcactgccgg gatgtctatc
     5041 tatgacacca tgcagtttat caagcctgat gtcagcacca tctgtatggg ccaggcggcc
     5101 tcgatgggcg ctttcttgct gaccgcaggg gcaaaaggta aacgtttttg cctgccgaat
     5161 tcgcgcgtga tgattcacca accgttgggc ggctaccagg gccaggcgac cgatatcgaa
     5221 attcatgccc gtgaaattct gaaagttaaa gggcgcatga atgaacttat ggcgcttcat
     5281 acggggcaat cattagaaca gattgaacgt gataccgagc gcgatcgctt cctttccgcc
     5341 cctgaagcgg tggaatacgg tctggtcgat tcgattctga cccatcgtaa ttgatgccag
     5401 aggcgcaact gtgccgctat acttatccag ggcggcacaa cgctgtaagc ggcttgcgcc
     5461 tgagaatggc atttgcgtcg tcgtgtgcgg cacaaagaac aaagaagagg ttttgaccca
     5521 tgacagataa acgcaaagat ggctcaggca aattgctgta ttgctctttt tgcggcaaaa
     5581 gccagcatga agtgcgcaag ctgattgccg gtccatccgt gtatatctgc gacgaatgtg
     5641 ttgatttatg taacgacatc attcgcgaag agattaaaga agttgcaccg catcgtgaac
     5701 gcagtgcgct accgacgccg catgaaattc gcaaccacct ggacgattac gttatcggcc
     5761 aggaacaggc gaaaaaagtg ctggcggtcg cggtatacaa ccattacaaa cgtctgcgca
     5821 acggcgatac cagcaatggt gtcgagttgg gcaaaagtaa cattctgctg atcggtccga
     5881 ccggttccgg taaaacgctg ctggctgaaa cgctggcgcg cctgctggac gtcccgttca
     5941 ccatggccga cgcaaccacg ctgaccgaag ccggttatgt gggcgaagac gttgaaaaca
     6001 tcattcagaa gctgttgcag aagtgcgatt acgacgtaca gaaagcgcag cgcgggattg
     6061 tctacatcga tgaaatcgac aagatttctc gtaagtcaga caacccgtcc attacccgag
     6121 acgtttccgg tgaaggcgta cagcaggcac tgttgaaact gatcgaaggt acggtagctg
     6181 ctgttccacc gcaaggtggg cgtaaacatc cgcagcagga attcttgcag gttgatacct
     6241 ctaagatcct gtttatttgt ggcggtgcgt ttgccggtct ggataaagtg atttcccacc
     6301 gtgtagaaac cggctccggc attggttttg gcgcgacggt aaaagcgaag tccgacaaag
     6361 caagcgaagg cgagctgctg gcgcaggttg aaccggaaga tctgatcaag tttggtctta
     6421 tccctgagtt tattggtcgt ctgccggttg tcgcaacgtt gaatgaactg agcgaagaag
     6481 ctctgattca gatcctcaaa gagccgaaaa acgccctgac caagcagtat caggcgctgt
     6541 ttaatctgga aggcgtggat ctggaattcc gtgacgaggc gctggatgct atcgctaaga
     6601 aagcgatggc gcgtaaaacc ggtgcccgtg gcctgcgttc catcgtagaa gccgcactgc
     6661 tcgataccat gtacgatctg ccgtccatgg aagatgtcga aaaagtggtt atcgacgagt
     6721 cggtaattga tggtcaaagc aaaccgttgc tgatttatgg taagccggaa gcgcaacagg
     6781 catctggtga ataattaacc attcccatac aattagttaa ccaaaaaggg gggattttat
     6841 ctccccttta atttttcctc tattctcggc gttgaatgtg ggggaaacat ccccatatac
     6901 tgacgtacat gttaatagat ggcgtgaagc acagtcgtgt catctgatta cctggcggaa
     6961 attaaactaa gagagagctc tatgaatcct gagcgttctg aacgcattga aatccccgta
     7021 ttgccgctgc gcgatgtggt ggtttatccg cacatggtca tccccttatt tgtcgggcgg
     7081 gaaaaatcta ttcgttgtct ggaagcggcg atggaccatg ataaaaaaat tatgctggtc
     7141 gcgcagaaag aagcttcaac ggatgagccg ggtgtaaacg atcttttcac cgtcgggacc
     7201 gtggcctcta tattgcagat gctgaaactg cctgacggca ccgtcaaagt gctggtcgag
     7261 gggttacagc gcgcgcgtat ttctgcgctc tctgacaatg gcgaacactt ttctgcgaag
     7321 gcggagtatc tggagtcgcc gaccattgat gagcgggaac aggaagtgct ggtgcgtact
     7381 gcaatcagcc agttcgaagg ctacatcaag ctgaacaaaa aaatcccacc agaagtgctg
     7441 acgtcgctga atagcatcga cgatccggcg cgtctggcgg ataccattgc tgcacatatg
     7501 ccgctgaaac tggctgacaa acagtccgtt ctggagatgt ccgacgttaa cgaacgtctg
     7561 gaatatctga tggcaatgat ggaatcggaa atcgatctgc tgcaggttga gaaacgcatt
     7621 cgcaaccgcg ttaaaaagca gatggagaaa tcccagcgtg agtactatct gaacgagcaa
     7681 atgaaagcta ttcagaaaga actcggtgaa atggacgacg cgccggacga aaacgaagcc
     7741 ctgaagcgca aaatcgacgc ggcgaagatg ccgaaagagg caaaagagaa agcggaagca
     7801 gagttgcaga agctgaaaat gatgtctccg atgtcggcag aagcgaccgt agtgcgtggt
     7861 tatatcgact ggatggtaca ggtaccgtgg aatgcgcgca gcaaggtcaa aaaagacctg
     7921 cgtcaggcgc aggaaatcct tgataccgac cattatggtc tggagcgcgt gaaagatcgc
     7981 atccttgagt accttgcggt tcaaagccgt gtcaacaaaa tcaagggacc gatcctctgc
     8041 ctggtagggc cgccgggggt aggtaaaacc tctcttggtc agtccattgc caaagccacc
     8101 gggcgtaaat atgtccgtat ggcgctgggc ggcgtgcgtg atgaagcgga aatccgtggt
     8161 caccgccgta cttacatcgg ttctatgccg ggtaaactga tccagaaaat ggcgaaagtg
     8221 ggcgtgaaaa acccgctgtt cctgctcgat gagatcgaca aaatgtcttc tgacatgcga
     8281 ggcgatccgg cctctgcact gcttgaagtg ctggatccag agcagaacgt agcgttcagc
     8341 gaccactacc tggaagtgga ttacgatctc agcgacgtga tgtttgtcgc gacgtcgaac
     8401 tccatgaaca ttccggcacc gctgctggat cgtatggaag tgattcgcct ctccggttat
     8461 accgaagatg aaaaactgaa catcgccaaa cgtcacctgc tgccgaagca gattgaacgt
     8521 aatgcactga aaaaaggtga gctgaccgtc gacgatagcg ccattatcgg cattattcgt
     8581 tactacaccc gtgaggcggg cgtgcgtggt ctggagcgtg aaatctccaa actgtgccgc
     8641 aaagcggtta agcagttact gctcgataag tcattaaaac atatcgaaat taacggcgat
     8701 aacctgcatg actacctcgg tgttcagcgt ttcgactatg gtcgcgctga taacgaaaac
     8761 cgtgtcggtc aggtaaccgg tctggcgtgg acggaagtgg gcggtgactt gctgaccatt
     8821 gaaaccgcat gtgttccggg taaaggcaaa ctgacctata ccggttcgct cggcgaagtg
     8881 atgcaggagt ctattcaggc ggcgttaacg gtggttcgtg cgcgtgcgga aaaactgggg
     8941 atcaaccctg atttttacga aaaacgtgac atccacgtcc acgttccgga aggtgcgacg
     9001 ccgaaagatg gtccgagtgc cggtattgct atgtgcaccg cgctggtttc ttgcctgacc
     9061 ggtaacccgg ttcgtgccga tgtggcaatg accggtgaga tcactctgcg tggtcaggta
     9121 ctgccgatcg gtggtttgaa agaaaaactc ctggcagcgc atcgcggcgg gattaaaaca
     9181 gtgctaattc cgttcgaaaa taaacgcgat ctggaagaga ttcctgacaa cgtaattgcc
     9241 gatctggaca ttcatcctgt gaagcgcatt gaggaagttc tgactctggc gctgcaaaat
     9301 gaaccgtctg gcatgcaggt tgtgactgca aaatagtgac ctcgcgcaaa atgcactaat
     9361 aaaaacaggg ctggcaggct aattcgggct tgccagcctt tttttgtctc gctaagttag
     9421 atggcggatc gggcttgccc ttattaaggg gtgttgtaag gggatggctg gcctgatata
     9481 actgctgcgc gttcgtacct tgaaggattc aagtgcgata taaattataa agaggaagag
     9541 aagagtgaat aaatctcaat tgatcgacaa gattgctgca ggggctgata tctctaaagc
     9601 tgcggctggc cgtgcgttag atgctattat tgcttccgta actgaatctc tgaaagaagg
     9661 ggatgatgta gcactggtag gttttggtac ttttgccgtt aaagagcgtg ctgcccgtac
     9721 tggccgcaac ccgcagaccg gtaaagagat caccatcgct gctgctaaag taccgagctt
     9781 ccgtgcaggt aaagcactga aagacgcggt aaactaagcg ttgtccccag tggggatgtg
     9841 acgaagttca agggcgcatc tactgatgtg ccttttttat ttgtattcgg tgactttctg
     9901 tgtcttgtgg gctgacaatt gcccccgttt cttgtcacaa taggcctttg cgcgcatcga
     9961 tacgttgcgt gaggtacaca gtcatctaca gcggagtgtt gttacaccat gatggacagc
    10021 ttacgcacgg ctgcaaacag tctcgtgctc aagattattt tcggtatcat tatcgtgtcg
    10081 ttcatattga ccggcgtgag tggttacctg attggcggag gcaataacta cgccgcaaaa
    10141 gtgaatgacc aggaaatcag ccgtgggcag ttcgagaacg cctttaacag cgagcgtaat
    10201 cgcatgcagc aacagctggg cgatcaatac tccgagctgg cagcgaacga aggctatatg
    10261 aaaaccctgc gtcaacaggt gctgaatcgt ctgatcgacg aggcgctgtt ggatcagtac
    10321 gctcgtgagc tgaaactggg tatcagtgat gagcaggtta aacaggcgat tttcgcgacc
    10381 ccagccttcc aggttgacgg caaatttgat aacagccgct ataacggtat cctcaaccag
    10441 atggggatga ccgccgatca gtacgcccag gcgctgcgta accagctcac tacccaacag
    10501 ctgattaacg gtgttgccgg taccgatttt atgctgaaag gtgaaaccga cgagctggcg
    10561 gcactggtcg cgcaacaacg cgtggtgcgt gaggcgacta tcgatgttaa cgcgctggcg
    10621 gcgaagcaac ctgtgaccga acaggagatt gccagctact acgaacaaaa caaaaacaat
    10681 ttcatgacgc cggaacaatt ccgcgtgagt tacatcaagc tggatgccgc aacgatgcag
    10741 caaccggtta gcgatgcgga tatccagagc tactacgatc agcatcagga tcaattcact
    10801 cagccgcagc gtacccgcta cagcatcatc cagaccaaaa ctgaagatga agcgaaagcg
    10861 gtacttgatg agctgaataa aggcggtgat tttgctgcat tagccaaaga aaaatctgcc
    10921 gatattatct ctgcccgtaa cggcggcgat atgggttggt tagaagatgc cactatcccc
    10981 gacgaactga aaaatgctgg tctgaaagaa aaagggcaac tgtctggtgt catcaaatct
    11041 tcggtcggtt tcctgattgt acgtctggac gacattcagc cagcgaaagt gaaatcgtta
    11101 gacgaagtac gtgacgacat tgcggcgaaa gtgaaacacg aaaaagccct cgatgcgtac
    11161 tatgcgctgc agcagaaagt gagcgatgcg gcaagcaacg acaccgagtc tctggccggt
    11221 gcagagcaag ctgccggcgt taaagccact cagacgggtt ggttcagcaa agataacctg
    11281 ccggaagagt tgaacttcaa gccggttgcc gacgctatct ttaacggcgg tctggtaggt
    11341 gaaaacggcg cgccgggcat caactctgac atcatcaccg tagacggcga ccgcgcattc
    11401 gtgctgcgca tcagcgagca caaaccggaa gcggtgaaac cgttggcaga tgttcaggaa
    11461 caagttaagg cactggttca gcacaacaaa gctgaacaac aggcgaaagt ggatgctgag
    11521 aaactgctgg ttgatttgaa agccggcaaa ggtgcggaag ctatgcaggc tgccggtctg
    11581 aaatttggcg agccgaaaat cttaagccgt tccggtcgtg acccgattag ccaggcggcg
    11641 tttgcactgc cactgccagc gaaagacaaa ccgagctacg gtatggcgac cgatatgcaa
    11701 ggtaatgtgg ttctgctggc gctggacgaa gtgaaacaag gttcaatgcc ggaagatcag
    11761 aaaaaagcga tggtgcaggg tatcacccag aacaacgcac aaatcgtctt tgaagctctg
    11821 atgagtaacc tgcgtaaaga ggcgaaaatc aaaattggcg atgcgctgga acagcaataa
    11881 tcctgaagcc gcctcgcaaa aaaatgcgtt gcagctgtaa caagaaaagg tcgctttcgc
    11941 ggccttttcc atttctgaac attgccattt gtttactgtt ttcactgccg ttaaggtgat
    12001 tccactgtta acaaacaagg agaaaacagt atgaaacacg gaattaaagc actgctcatt
    12061 accctgtctc tggcttgtgc cggaatgtct catagtgctc tggcggcagc tcctgcggcg
    12121 aaaccgacaa cggtagaaac caaagcagaa gctcctgcag cacaaagtaa agcagcagta
    12181 ctggcgaaag ccagtgacga agaaggcacc cgggtcagca ttaataatgc cagcgcggaa
    12241 gagttagccc gcgtgatgaa tggcgttggc ctgaagaaag cgcaggcgat tgtcagttat
    12301 cgcgaagagt acggtccgtt taaaacggtg gaggatctaa agcaggtgcc ggggatgggc
    12361 aattcgctgg tggaacgtaa tctggcggta ttaaccctgt aattaatttg catagtggca
    12421 attttttgcc agactgaaga ggtcatacca gttatgacct ctgtacttat aacagttctt
    12481 ataacaacaa cgtaaggtta ttgcgctatg caaacacaaa tcaaagttcg tggatatcat
    12541 ctcgacgttt accagcacgt caacaacgcc cgctaccttg aatttctcga agaagcccgc
    12601 tgggatgggt tggaaaatag cgacagtttt cagtggatga cggcccataa catcgccttc
    12661 gtcgtggtca atatcaatat taactatcgt cgcccagcgg tattaagcga cctgttaact
    12721 attaccagtc agttgcagca attaaacggt aaaagcggca tcttaagcca ggtcattaca
    12781 ctggagccgg aagggcaggt ggtagcggat gcgcttatta cgtttgtttg tattgatctt
    12841 aaaacgcaga aagcattagc tctggaaggg gaattgcgcg aaaagctgga gcagatggtt
    12901 aagtaaacgt tttgtggtgc cggatgctca agccgcatcc ggcgacaccc ggaataatta
    12961 cctcaacccg gttttctgct tcatcgctgc catcaccgtc ggtttatcgg ccagataatg
    13021 attcaaaccg ttggcgcgta aattacatgc cgcacaatga ctgcaaccgt cgcctttaat
    13081 gccgttatag caggtcaacg tttcgttacg gactaaatcc agtttgccgt aataatctgc
    13141 cagcgcccag gtttccgctt tatcaatcca catcagcggc gtttcaaaac gaatatcttt
    13201 cgccatgccc aaactgacgg catggtttag tgctttcaca aactcatcgc ggcaatccgg
    13261 gtagccggag aaatccgttt cacagacgcc ggtaattacg gcttctgctt ttacctgata
    13321 cgcatatatt gccgccagcg tcaggaacaa aatattacgc cctgggacaa acgtattcgg
    13381 gatgccatcg gcttcaggtt cataatcagg caccggaatg ctgtcacgtg tcaggctgct
    13441 gaccgccagc tcgttgagca gcgttacatc aagaacctta tgcgcgcgtg ctcccagttt
    13501 cagcgccagt tcgcgtgcca cgtcgatttc tgcgcgatgt cgctgaccgt aatcgaacgt
    13561 cacgcaatgg acttcatcat attgttgtaa tgcctgcacc agacaggtgg tggaatcctg
    13621 gcctccactg aacacaacga cagcacgttt catagataat cctgcttgaa caataaaagc
    13681 gttatggtaa cgcctgcgat taacccggac cagctattca ttgcgacggc gcgggaagcc
    13741 aggcttcggt aaattcaaac cagccgcgcg gtgtcagtcg cacaccgttc acgccgggag
    13801 gggcactaat gcgatagtga tagttgaaca gcggcgtcag cgtcgcatct gtcattaact
    13861 ggctaaaaac cgctttcagg gcattaaatc ggttttcctc atcaggcatt acttgcaccg
    13921 cgtccagtgt cgattgtaga tgtgcgtatg ctggagcgtc gaaaacatgt ggccacagcg
    13981 gatcgcagcg cagccattgc tccagagtat attccggtgc ttcgccaatt aatctgtcgc
    14041 ccatcatgag gtctgcgtgt gccagtaggg tcgtgtcgtc ccagtttttt gcgttatgaa
    14101 aaataattgt gagttcacag ccttccgctg ccagtgtcgc ctgtaggcgt tctgccatgg
    14161 tatgaagttc tatcggtagg tgataaacca gcgtcaaggt tttcggtagt ttgacttcat
    14221 ccggtacttg ccaatgcgga atagtccagc ctggcagtaa tgcatgactg gcggtgatca
    14281 ggttttctcc gacttctaac gtttgtaata aaccggattg atgaataatg gagatcactt
    14341 ttcgcgcctg ccagagggag agtcggggac ttttgcgcaa cgttaaatag caaaaaccta
    14401 aactgatgcc actactgacc tggctgaccc gttgcagctc ctccggtttg ccgatggtga
    14461 tttgcacggg atgccgacaa ctggttccca aatctttttc gaaaagcggc ggagttatcc
    14521 agtactcaac cgctttaagc agcggatgac gtaaatggta ataatcatgg ctttccaggc
    14581 gcaccagttc cgttgtgaat tgtgttaagc gaaaaggacc cgtgccgatc agtgggaatt
    14641 gcggatgcgc cagatggctg caataactcg ccagccggtg agcaagccag taatcggggc
    14701 gatgtaaaaa gaaggtcaga cactgcggat gggtgacctc aatacgcttc acgctaataa
    14761 ataattgatc cagtgctggc agttgtaaca gcatcaataa tcgctggtgt aagtgtgagg
    14821 cttttactgc atcgccgtta tgccagtgta gggttgaacg aagataaaag tcccagcgta
    14881 acccgtcagt agaggtttcc cagtgatgcg ctaaatcgcc aatcgggcgc tgagtattat
    14941 tatcgaagcg ggtcaggccg gaaaatatct gcccggcgag atgctgctcg gcacggccgg
    15001 gcaaaaagcc tggttgtagc ggttcgagcg ggcgatagta gggaatacgc aacgtgggtg
    15061 tatcgttttg ccattgtccg cccataaacg gctgtaacag agtgcgcagc tcacctgggg
    15121 ccagttgcgc cagctccagc acatcttgct gctttccggt ttccagtgcc tgttccatca
    15181 tcgcattgcg tagcgattcc ggcgtgacca gaaagcgtaa ttgtccgcgc tttccgcgtc
    15241 ctgactgcgc ctgccactcc agccatcccg cctcctgtgc ctgacgcaac agcgtacgaa
    15301 catggcgttc gctgcaaaaa cagcgttcgg ccagttcgct gacggtgacg gtttgcggct
    15361 ttccggctga aggttgccac agacgttgat actggttaag acggttgagc aatcgcatat
    15421 aaacccggaa caatattatt taactattca ctattacttc cgtatatatc aggtgatact
    15481 caatcaccat taaccgtgtc acagagtgga gaaagaaatg gctcgtctgg cagcatttga
    15541 tatggatggc actttattga tgcctgacca tcatttaggt gagaaaaccc tctctacttt
    15601 ggcgcgactg cgtgaacgcg acattaccct cacttttgcc acggggcgtc atgcgctgga
    15661 gatgcagcat attctcgggg cgctatcgct ggatgcatat ttgattaccg gcaacggaac
    15721 gcgcgtgcat tctctggaag gtgaactttt acatcgtgat gatttacctg cggatgtcgc
    15781 ggagctggtg ctgtatcagc aatgggatac ccgagccagc atgcatatct tcaatgacga
    15841 cggttggttt accgggaaag agatccctgc gttgttgcag gcatttgtct atagcggttt
    15901 tcgttatcag ataatcgatg tcaaaaaaat gccactcggc agcgtcacca agatctgctt
    15961 ctgtggcgat cacgacgatc ttacacgctt gcagatccag ctatacgaag cattaggcga
    16021 gcgtgcacat ttgtgttttt ccgccacgga ttgcctcgaa gtgctgccgg tgggctgcaa
    16081 taaaggcgct gcattgacgg tgctgaccca acatttaggt ttatcgttgc gcgattgcat
    16141 ggcctttggt gatgcgatga acgatcgcga aatgttaggc tgcgtcggta gcgggtttat
    16201 tatgggcaat gcgatgccgc aactgcgcgc ggagctcccg catttaccgg tgattggaca
    16261 ttgccgaaat caggctgtct ctcactattt gacgcactgg ctggactatc cacatctacc
    16321 ttattccccc gaataatgag atcccttcca gcaccgggca attgcccggt tttttttgcg
    16381 ttgaatttgt cattttgtgc cgtggtgttt aaaccgcaca gaataaattg tcgtgatttc
    16441 acctttaaaa tagaattaaa agagaaaaaa attctctgtg gaagggctat gttagataaa
    16501 attgaccgta agctgctggc cttactgcag caggattgca ccctctcttt gcaggcactg
    16561 gctgaagccg ttaatctgac aaccacccct tgctggaagc gcctgaaacg gctggaggac
    16621 gacggtatcc ttatcggcaa agtcgccctg ctggatccgg aaaaaatagg cctcggcctg
    16681 accgcttttg tgctgataaa aacgcaacat cacagcagcg aatggtattg ccgctttgtc
    16741 acggtggtta ccgaaatgcc agaagtgctg gggttctggc gcatggctgg tgaatacgat
    16801 tatctgatgc gcgtccaggt tgccgacatg aaacgctacg acgagtttta taagcgtctg
    16861 gtaaacagcg tgccggggct gtcggacgtc acttccagct tcgcgatgga acagattaaa
    16921 tacaccactt ctttacccat cgaataaata tccagaatca ggtcaggaca caacgcgtgc
    16981 gattatttgc tcaattaagc tggtatttcc gtcgggaatg gcgtcgctat ctcggggctg
    17041 tcgccttgct tgtcattatc gcgatgctgc aactggttcc gccaaaagtg gttggtattg
    17101 ttgtcgatgg cgtaacagaa caacacttta ctaccgggca gatcctgatg tggatcgcca
    17161 ccatggtgct gattgccgtt gtggtttatc tcctgcgtta cgtctggcgc gtattgctgt
    17221 ttggtgcgtc ttatcaactg gctgttgaac tgcgtgaaga ttattaccgt cagctaagcc
    17281 ggcagcatcc tgagttttac ctgcgtcatc gcacgggtga cctcatggct cgtgcgacta
    17341 atgacgtcga tcgcgtcgtg tttgccgccg gagaaggggt gctgacgctg gtggattcac
    17401 tggtaatggg ctgcgctgtg ttgattatga tgtctacgca aattagctgg cagttgacct
    17461 tatttgccct gttaccgatg ccagtgatgg cgatcatgat taagcgcaac ggcgatgctt
    17521 tgcatgaacg ctttaagctg gcacaggcgg cgttttccag tcttaatgac cgcacccagg
    17581 aaagcctcac cagtatccgc atgatcaaag cctttggtct ggaagatcgc cagtcggcgt
    17641 tatttgccgc ggatgccgaa gataccggca aaaaaaacat gcgggtggcg cgtattgatg
    17701 ctcgtttcga cccgaccatc tatatcgcga ttggtatggc gaacttgctg gcgattggcg
    17761 gcggtagttg gatggtggtg cagggcagtt taacgctggg ccagctcacc agttttatga
    17821 tgtatttagg tctgatgatt tggccaatgc tggcgctggc atggatgttt aacattgtgg
    17881 aacgtggtag tgctgcgtac agccgtattc gcgcgatgct ggcggaagcg ccggtggtga
    17941 acgatggtag cgaacccgtg ccggaagggc gtggcgaact ggatgtaaat attcaccagt
    18001 tcacgtatcc gcagactgac catcctgcgc tggaaaacgt caatttcgcc ctgaaacccg
    18061 gtcagatgct gggtatctgc gggccgactg gttccggcaa aagtaccctg ttgtcgctca
    18121 ttcagcgtca tttcgacgtc agcgaggggg atattcgctt tcatgatatt cctctgacga
    18181 agttacaact cgatagctgg cgtagccgcc tggcggtagt tagccaggcg ccattccttt
    18241 tttctgacac cgtggcgaat aacatcgcgc tgggttgccc gaatgccacc cagcaagaga
    18301 ttgagcatgt cgcgcggtta gccagcgtac atgacgatat tttgcgtcta ccgcaaggtt
    18361 acgatacaga ggtgggcgag cgcggcgtga tgctttccgg cgggcaaaaa cagcgtatct
    18421 ctattgctcg tgcgttatta gtcaacgcgg aaatcctcat ccttgatgat gcgctttcgg
    18481 cggtggacgg acgcacagag caccagatcc tgcataacct gcgtcagtgg ggacagggaa
    18541 gaacggtaat catcagtgcc catcgccttt ctgcactgac ggaagccagt gaaattattg
    18601 tgatgcagca cggacatatc gcccagcgtg gcaatcatga tgtgctggca caacaaagcg
    18661 gctggtatcg cgatatgtat cgctatcaac aactggaggc ggcgctcgac gacgctccgg
    18721 aaaatcgcga ggaggccgtc gatgcgtagt tttagccaac tgtggccgac tctcaagcgc
    18781 ctgttagcgt acggttcacc gtggcgtaaa ccgctgggga ttgcggtcct gatgatgtgg
    18841 gttgcggcgg cggcagaagt cagtgggccg ctgcttatca gctattttat cgacaatatg
    18901 gtagcgaaaa ataacctgcc gttgaaaatg gttgcagggc tggctgcggc gtatgttggg
    18961 ctacaactgt ttgccgccgg gctacattac gcgcagtcgc tgctgtttaa tcgggcggca
    19021 gtaggcgtag tgcaacagtt gcgtaccgac gtgatggatg ctgcgttacg ccagccatta
    19081 agcgagtttg atacccaacc cgtcgggcag gtgatttccc gcgtcactaa tgacactgaa
    19141 gtgatccgcg atctctacgt taccgtagtg gcaactgtcc tgcgcagtac cgcactggtg
    19201 ggcgcgatgc tggtggcgat gttcagcctc gactggcgaa tggcgctggt ggcgataatg
    19261 attttcccgg tagtgctggt ggtaatggtg atatatcaac gttacagcac gccgattgtc
    19321 cgtcgtgtgc gcgcctatct ggcggatatc aacgacggct ttaacgaaat catcaatggc
    19381 atgagcgtca tccagcagtt ccgtcagcag gcgcgatttg gcgaacgtat gggtgaggcc
    19441 agtcgttcac actatatggc gaggatgcaa accctgcgcc tcgacggttt tctgctgcgt
    19501 ccgctgctga gtctgttttc atcgctcatt ctttgtggat tgttgatgct gtttggcttc
    19561 tccgccagcg gcaccattga agtgggcgtg ctgtatgcct ttatcagcta tcttgggcga
    19621 cttaacgaac ccttaatcga actgaccacg caacaggcga tgctgcaaca ggctgttgtt
    19681 gctggtgagc gcgtgtttga actgatggac ggaccgcgcc agcaatatgg caatgatgat
    19741 tacccgttac agagtggcac catcgaagtc gataacgtgt catttgctta tcgcgatgac
    19801 aatctggtgc taaagaacat taatctctct gtgccttcgc gtaactttgt ggcgctggtc
    19861 gggcataccg gcagtggtaa aagtaccctc gccagtttat tgatgggcta ttacccgcta
    19921 acggaaggtg agattcgcct tgatggtcgt ccattaagtt cgctaagtca cagcgcgctg
    19981 cgccagggcg tggcaatggt gcagcaagat ccggtggtgc tggcggatac cttcctcgcc
    20041 aacgtgacgc tggggcggga tatctccgaa gaacgcgtct ggcaggcgct ggaaaccgtg
    20101 caactggcgg agctggcgcg tagcatgagc gacggtattt acacgccgct gggcgagcag
    20161 gggaataatc tctcagttgg gcaaaagcaa ctgctggcac tggcgcgcgt gctggtcgag
    20221 acgccgcaaa tcctgatcct tgatgaggca accgccagca ttgactccgg tactgaacag
    20281 gcgattcaac atgctctggc ggcggtgcgt gaacatacca cgctggtggt gattgctcac
    20341 cgcttatcga ccattgttga tgccgacact attctggtgc ttcatcgtgg gcaagccgtg
    20401 gagcagggca ctcaccagca actgctggcg gcccagggac gctactggca gatgtatcaa
    20461 ctgcaacttg cgggcgaaga gctggcagcc agcgtgcgtg aagaagaatc attgagcgcc
    20521 tgaatagcgc aatatttcat cgttggtgca aaaatgtaac gcactgtgca ctgtcatagt
    20581 gcgttttcat tttcaatctt cttaacttcc tgctctcttt ctcgtttttc atttctggca
    20641 caccgcttgc attaccttct tcgtgtagca gaaccattac cgaattctga ccggagggga
    20701 tctatgaagc tggtgaccgt gataatcaaa ccattcaagc tggaagacgt tcgtgaagcg
    20761 ttatcttcca ttggtattca gggcctgacc gtcaccgaag tgaaaggttt cgggcgtcag
    20821 aaagggcatg ccgagctgta ccggggggcg gaatacagcg tcaacttcct gccaaaagta
    20881 aaaattgatg tggcaattgc tgatgaccaa ctcgatgaag tgatcgatat cgtcagtaag
    20941 gcggcttaca ccggaaaaat tggcgacggc aaaatcttcg tcgctgaatt gcaacgcgtc
    21001 attcgtattc gtaccggcga agccgacgaa gcggcgctgt aatctctggc acacagcaac
    21061 aggaacgaaa aatgaagata gcgacgataa aaactgggct tgcttcactg gcgatgctgc
    21121 cgggactggt aatggctgca cctgcggtgg ccgataaagc cgacaatgcg tttatgatga
    21181 tttgtactgc gctggtgctg tttatgacta ttccggggat tgccctgttt tacggtgggt
    21241 tgattcgcgg caaaaacgtg ctgtcgatgc tgacgcaggt gacggtgacg tttgcactgg
    21301 tctgtattct ctgggtggtt tacggttact cgctggcgtt tggtgagggt aacaacttct
    21361 tcggcaacgt taactggttg atgctgaaaa acatcgaact gacggcggtg atgggcagca
    21421 tttatcagta tatccacgta gcgtttcagg gatcgtttgc ctgcattacc gtaggcttga
    21481 tagttggggc gctggcggaa cgaatccgct tctcagctgt gttgattttc gtggtggtat
    21541 ggctgacgct ctcttacatt ccgattgcgc atatggtctg gggcggtggt ttgctggctt
    21601 ctcacggtgc gctggatttc gcgggtggca cggtggtgca cattaacgca gcaatcgccg
    21661 gtctggtggg cgcgtatctg ataggcaaac gcgtgggctt cggtaaagag gcgtttaaac
    21721 cgcacaacct gccgatggtc ttcaccggga ctgccattct ctatatcggt tggtttggct
    21781 ttaacgccgg gtcagcgggc acggcgaatg aaatcgcggc actggcattt gtgaatactg
    21841 tggtcgcaac ggcggcggca attcttggct ggatcttcgg tgaatgggcg ctgcgtggta
    21901 agccttctct gctgggagcg tgttctggcg cgattgccgg tctggtcggc gtgacgccag
    21961 cgtgcggcta cattggggtt ggcggcgcgt tgattatcgg cgtggtagct ggtctggcgg
    22021 gtttgtgggg cgttaccatg ctcaaacgct tgctgcgggt ggatgatccc tgcgatgtct
    22081 tcggtgtgca cggcgtttgt ggcattgtcg gctgtatcat gaccgggatt tttgccgcca
    22141 gttctctggg cggcgtgggc ttcgctgaag gtgtgacgat gggccatcag ttgctggtac
    22201 agctggaaag catcgccatt acgatcgtct ggtccggtgt ggtggcattt attggctaca
    22261 aactggcgga tctgacggtt ggcctacgtg tgccggaaga acaagagcga gaagggctgg
    22321 acgtcaacag ccacggcgag aatgcctata atgcgtaaca agcactgcaa aaaatagccg
    22381 gacggttttc acctccggct atttttttaa ttgtgattac gcattacccc ttcctgaacg
    22441 gtcgaggcaa ccagcacgcc gtcctgggta taaaactcac cgcgcacaaa gccgcgtgcg
    22501 ctggacgccg aggtgctctc cacgctatac agcagccatt cattcaaatt aaacgggcga
    22561 tggaaccaca tggaatggtc aatggtggca atctgaatcc ctggttcgag aaaaccgatg
    22621 ccgtgcggct gtagagctac cggcaggaag ttaagatcag aagcgtaacc gagcagatac
    22681 tgatgaacgc gcaggtcatc cggcacgcta ccatttgcgc ggatccacac ctgacgatgt
    22741 ggttctgcga cgtgaccttt cagtgggtta tgaaactcca ccggacggac ttccagcgga
    22801 cgatcgcaga tgaatttatc tttaagcact ggcggcagca ggtgcgccag cgattgggcg
    22861 atttgcgttt ccgaaggcag gccatcaggc gctggcgcgg acggcattgt tttttgatgt
    22921 tcgaaacccg cttctggtgc ctggaaagag gccgtcatat aaaaaatcgg tttgccgttt
    22981 tgaatagcag caacccggcg ggcgctgaag ctgttaccgt cacgcagcgt ttcgacatca
    23041 taaataatcg gcttcttact atcgccaggg cgaagaaagt agctgtgaaa cgaatgtacc
    23101 agccgctctt cagggacggt ctcttttgca gcatacaagg cctgacccac gacctggccg
    23161 ccaaacacct ggcgtaaacc taaatcttca ctctggccgc gaaagagtcc ttcctcaatt
    23221 ttttccagat ttaacaatgt cagtaaattt tttagcgcct gactcatata actctccagt
    23281 aacaaagctg ccgcagcaag ccaaagtgag ttgagtataa cgcaaatttg ctactggtcc
    23341 gatgggtgca atggtctgaa ttacgggcta attacaggca gaaatgcgtg atgtgtgcca
    23401 cacttgttga cgttactatt ttgttaacca ctcttccggc gaggaaagtt agcccgctgg
    23461 tgcattgata ataaggagaa atgaatgaaa ctcgtgcaca tggccagtgg tttagcggtt
    23521 gcgattgcgt tggcggcttg cgcagataaa agcgcggata ttcagacgcc agccccggct
    23581 gcaaatacgt ctatttcagc aacacaacaa cctgctatcc agcaaccgaa tgtctccggt
    23641 accgtctgga tccggcagaa agtcgcactg ccgcctgatg ctgtgctgac cgtgacactt
    23701 tctgacgcgt cgttagccga tgcaccgtca aaagtgctgg cgcagaaagc ggtgcgtacc
    23761 gaaggtaaac agtcaccatt cagctttgtt ctgccattta acccggcaga tgttcagccg
    23821 aacgcgcgta ttctgttgag tgcggcgatt accgtgaatg acaaactggt atttatcacc
    23881 gataccgttc agccggtgat caaccagggc ggaactaaag ccgacctgac attggtgccg
    23941 gtacagcaaa ccgccgtgcc ggttcaggcc agcggtggcg caacgactac cgtaccttcg
    24001 acttcaccaa ctcaggtgaa tccgtcttcg gcagttccag ctcctacgca atattaagcg
    24061 acgttaaccc tctccgcccg gagagggtta gtagttccag cgataacgct gcaagtcgat
    24121 ttgcccgctt cccgatacca tcacaccttc tgccagtaat gcctgtcgct gacgctgtaa
    24181 atccggtccg gttagcgaaa ttgtgccgtg gcgattaacc acccggtgcc agggtaaggt
    24241 gctgccttca gggagacgct ttaacacacc gcccacctgg cgcgcggcgc ggggcgatcc
    24301 cgccagtttc gccacatcac cgtaagtggt gacatagcct tcgggaatag cggcgacgat
    24361 ttgccagacg cgttggggaa atgaatcttc tttttccatc ttttcttcct gaggtaattt
    24421 ttcagcataa tctggaaaaa cgcccgagtg aagtcgcatt gcgcaagaaa ccagcatctg
    24481 gcacgcgatg ggttgcaatt agccggggca gcagtgataa tgcgcctgcg cgttggttct
    24541 caacgctctc aatgggggct ctgttggttc tcccgcaacg ctactctgtt taccaggtca
    24601 ggtccggaag gaagcagcca aggcagatga cgcgtgtgcc gggatgtagc tggcagggcc
    24661 cccacccatt tctgcctccc accgtttcgt caaaaaaaac caacatggct aaactttaat
    24721 cacaactgac gtcgcaagaa ttgtctggct gcgcagtacg cttcggaggt atgtctgatg
    24781 aagtatgttg atggttttgt ggttgccgtt cctgccgata aaaaggatgc ctatcgggaa
    24841 atggccgcta aggctgcgcc attgtttaaa gagtttggcg cgcttcgtat tgtcgaatgc
    24901 tgggccagcg atgtaccgga tggcaaagtg accgattttc gtatggcggt gaaagcggaa
    24961 gagaatgaag aggttgtctt tagctggatt gaataccctt caaaagaggt ccgcgacgct
    25021 gctaatcaaa agatgatgtc ggacccacgg atgaaagagt tcggcgagtc catgccgttt
    25081 gacggcaagc gaatgatcta tggcggattc gagtcaatca tcgacgaata ggtagcgtga
    25141 cgggctgtgc ggcgtgccgt cagcccaaaa attcacaaat gttgctcggc ccagcgtaag
    25201 aaatcttctt tcggtaatgc cttgctgtag agccagccct gaccgtagtg cacgccatgc
    25261 tggcgtagcc actcttcttg tttactggtt tcgattccct ccgctaccat tttcagtttc
    25321 agtgtttttg ccatttcgat gatatgcggc gtgacatttt tatattccag cgcatcaacg
    25381 aaagatttat cgatcttcag aatgtcgaca tccagatcct gtaaataact taaacttgaa
    25441 tatcccgtac caaaatcatc aagataaatt tcatggcccg cctcccggta gcgagaaatt
    25501 atcggggcgc tggttttcgg atcggcaaac tcgcgttcag tgagttcaag cgcgatctgt
    25561 ctgggattaa cctgatagtg attgatcatt tcacgcagca attgcgggat tttttccgag
    25621 gtgagcacgg tggattcaag attgatcgaa atatgctgct gtggatgctg acgcagccag
    25681 tcgcccatat cttcaaagac gcttcttata atcagtagcg tcaatggctc agaaaggccc
    25741 gtttgctgtg ccagcggaat aaaactatct ggtgacaacc aactaccgtc tgtctgcggc
    25801 cagcgcgcca gtgcctcagc accgacaatt ttgccattgg ctaaggagac aatcggctga
    25861 tagtgcacgc aaatatcacg attttcgata gcatcctgca gccgatgatg cggtgactgg
    25921 atacggcgca aaatacgcag cacaaacatc gctgccagca ggccaatcac caacccgagc
    25981 gggaaccaaa taaagacttg ccgatgccag cctttctgca acattttcgt tgaagcccag
    26041 gtgatgatcg aaatattcat ctccgggaag ggcaggatat cgtaaatgat tccattattt
    26101 tcgatatgct caccgggtgt tttttgtagc ctggtaataa ttccctgagc aatttcatcg
    26161 ctgctggtta tgacaacgtt atgggcattg ccaataatgg cggcatcaat ttgccatgag
    26221 ctatagggaa tgacatcaat aaaggaagcg gggtcgatca tgacgacata atgtgccgtt
    26281 cccatggcga ccatgtaacg gataatgcct aaatcgttat gcgatgttaa ccagacacga
    26341 taaccatctt tcgaaatttt acctggctcg gggaaggtat cgggcggact ttcatgctcc
    26401 agagacgaac actggggaac gttgttatcg atataaacca cttcctgaat atagcgataa
    26461 ctgtaagata cccgacgcat ttccatgaga tgggcttcgc tacaggcagc gccttgccat
    26521 ctttccagct cttgcagcgc atctttccct tgtgtcgcca ccttattggc ccgaatagcg
    26581 acgcgggagg aataggtatc cagctcttca ataaacgatg tttctacctg ctgatgggcc
    26641 agccagatgc ttaagccgac aggcagcaat actgaaagaa tcagtactcc caaaataagg
    26701 ccgaccagat gtcgtgttct caccagcata tccttattaa cacagtgtag ggaaagtata
    26761 tctgattgtg gaaaaaggct ggcaggagat aaggaggtag agctggtatt tcatgaagtg
    26821 atgggtggaa acgatcattg tcatttgacc aggcgcagag ctttacgcct ggtatgtaac
    26881 cctaacttaa gatgttgatt cggcgcgagc gagggtaaaa atatcgtaaa aagacagttc
    26941 acctttacgg acgatcattt tttgcagttg ttccttatga acatccgcga cacgcggaga
    27001 gttcaagatg gcttcaacca gcgcggcagg tacaaagcgc gtgttgtacc attcgccgtt
    27061 atagcaaacg cggaaatcca gcacgtcgat atcttcatag cggtagcgtg ggtagacatc
    27121 gaaaaagaag aaaccattaa gcaggataaa taatacaacc agtagccaga cagagcctga
    27181 cagcgtttcg gactgcaaca tcaccgccag ggtggcaaaa aaagcaacgt acataccgat
    27241 aaacagcccc ggatgtttac ggataaaact gatactaaag cggggtttgt tgtcgcgttt
    27301 ttcgcgggta ttcagagact caatcgtttc ggtcagcagg cgttgtattt cggtcatcgt
    27361 ttgccttcgt ggtatctgca actttccagg gaacacccta ttttaacgtg ggaatagtag
    27421 agaggaagta acagatttac cacaattttg cataacagtt gcgaaaaacc gattacaatt
    27481 ttttaattat tctggctgga ttaccgccca cgacaacgtt gtccgggaca tcttttgtga
    27541 caactgcacc tgaggctacc acgacgttat caccaatggt cacaccaggg ttaatgaccg
    27601 cgcgtccgcc aatccagacg ttattaccga tggtgacggg tttccccagt tcagcaccgc
    27661 tattacgtgc tacagggtcg atgggatgtg ttgccgtgta gatatgaacg cctggtgcca
    27721 acatacagtt atcaccgatg cgaatagggc agacatcaag catcacgcaa tcgaagttgg
    27781 cgaaaaaatt attaccgaga aaaatgttat agccatagtc acagcgaaac gttggctcaa
    27841 tataagcctc tgtcacctga ccgaatagat cagcgagaat ttgctggcgt aatgtgtgct
    27901 cttccgcctg ggaatgattg tatcggtgaa taagctgacg agcgcgcagg cgatcgcgag
    27961 ataacgtctc atctgccgag cgatacaact caccagcaat catcttttct ttttctgtgc
    28021 tcattactga cctccggttg ctgaaaatgc ggcaacacag taagacgaaa agtcagtgaa
    28081 gagaacgttc ccattacatc tgtgtgataa agatcacata gggtatgtct tcatggtgaa
    28141 aagtataaaa ttcttaataa acagccggtt atagctccga aagcgaatta tttattagcg
    28201 aataaatttc catactgagg aagggatctt gtcgtatagt ttattcatgg tcaattcggc
    28261 gaggcggtga tctgcggctg agtaaaatac cgccagttca ttatctgata attcgtattt
    28321 atttttctcg ataacacgct ccagcgtgtc aattgtctgg caacgacgta aacgcattaa
    28381 ataatcggtt ttcgttaaag gtttttcgga catacttcta cccatggttg taataattct
    28441 aacaagataa actcgcagga ttctctttcg tcgcattgac aaaacaacgg aatagtcgat
    28501 tacctgactt ccgccatttc tgaagatcct gcatattaat accataacta ctgaacaaca
    28561 taaaggtgtc atccagatat tcgtcgatct gctcaatgag cttattgtct tcattatact
    28621 taattttgta attaagtgcg aaggtcgcaa tatgctcaat cagttcattc aactggaggt
    28681 tgatcgccga ggttgggtcg ttaacccagc catgattgct ttcttcaagg tttgcaaggc
    28741 agtcatgata cagggtttca cagagaaact taagctgtgc gatatcatgt cttttgggtg
    28801 agtattcatc cataacgcgt ccccttctta gcggttgaac taacggacac ctttcgggat
    28861 ggaaaaaact tactgacctg gacttgccct ctcgtttgtt agcttaacta taagccactc
    28921 tttgcaggtt ttcatcgcat tattacgaaa aattacaatt aggaaggaat cgggacagga
    28981 ctcacttttt catactagca ctaacccgca gcaggtaaaa gcagtttgct cgaactgttc
    29041 ataacatttc aggattatcg ccagatgaaa ttggtgacac taataccagg attgctctga
    29101 atatgacgta ataaccgagg aatgaataaa gaattaccgc aaata
//
LOCUS       DAPGWB010000046        29081 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.046, whole genome shotgun sequence.
ACCESSION   DAPGWB010000046 DAPGWB010000000
VERSION     DAPGWB010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 29081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29081
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.046"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(128..1792)
                     /gene="glnS"
                     /locus_tag="RHX79_001956"
     CDS             complement(128..1792)
                     /gene="glnS"
                     /locus_tag="RHX79_001956"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HDV2197137.1"
                     /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH
                     AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSD
                     YFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK
                     MRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI
                     SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL
                     LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRE
                     DLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRAD
                     FREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADG
                     RKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSL
                     KDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE"
     gene            complement(1995..3941)
                     /gene="nagE"
                     /locus_tag="RHX79_001957"
     CDS             complement(1995..3941)
                     /gene="nagE"
                     /locus_tag="RHX79_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetyl glucosamine transporter subunit
                     IIABC"
                     /protein_id="HDV2197138.1"
                     /translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQA
                     GGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGI
                     ITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIH
                     AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR
                     FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGV
                     TEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS
                     QNVWMLLVMGVVFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLNQL
                     ATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVI
                     VGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGD
                     VVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEI
                     VVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDD
                     FSGLIIKAQGHVVAGQTPLYEIKK"
     gene            4274..5074
                     /gene="nagB"
                     /locus_tag="RHX79_001958"
     CDS             4274..5074
                     /gene="nagB"
                     /locus_tag="RHX79_001958"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008805656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HDV2197139.1"
                     /translation="MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT
                     PMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE
                     NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK
                     TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEG
                     CVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL"
     gene            5134..6282
                     /gene="nagA"
                     /locus_tag="RHX79_001959"
     CDS             5134..6282
                     /gene="nagA"
                     /locus_tag="RHX79_001959"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDV2197140.1"
                     /translation="MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEVEQR
                     SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITT
                     SDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLC
                     ENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLY
                     NAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA
                     PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRM
                     ATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ"
     gene            6291..7511
                     /gene="nagC"
                     /locus_tag="RHX79_001960"
                     /gene_synonym="nagR"
     CDS             6291..7511
                     /gene="nagC"
                     /locus_tag="RHX79_001960"
                     /gene_synonym="nagR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NagC"
                     /protein_id="HDV2197141.1"
                     /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQL
                     APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITL
                     FDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDP
                     DSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILV
                     RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ
                     RVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFN
                     PQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKR
                     AMLNGILLQHLLEN"
     gene            7559..8311
                     /gene="nagD"
                     /locus_tag="RHX79_001961"
     CDS             7559..8311
                     /gene="nagD"
                     /locus_tag="RHX79_001961"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide monophosphatase NagD"
                     /protein_id="HDV2197142.1"
                     /translation="MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNY
                     PSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKA
                     GFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALC
                     AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI
                     LVLSGVSSLDDIDSMPFRPSWIYPSVAEIDVI"
     gene            8568..10232
                     /gene="asnB"
                     /locus_tag="RHX79_001962"
     CDS             8568..10232
                     /gene="asnB"
                     /locus_tag="RHX79_001962"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001724523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HDV2197143.1"
                     /translation="MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNA
                     ILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEV
                     ILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVAS
                     EMKALVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDFDAVKDNVTDKNELRQALED
                     SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP
                     GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS
                     RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKA
                     MSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFESYLPASVAWRQK
                     EQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPL
                     PSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK"
     gene            10613..10689
                     /locus_tag="RHX79_001963"
     tRNA            10613..10689
                     /locus_tag="RHX79_001963"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10647..10649,aa:Met,seq:cat)
     gene            10698..10782
                     /locus_tag="RHX79_001964"
     tRNA            10698..10782
                     /locus_tag="RHX79_001964"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10732..10734,aa:Leu,seq:tag)
     gene            10806..10880
                     /locus_tag="RHX79_001965"
     tRNA            10806..10880
                     /locus_tag="RHX79_001965"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10838..10840,aa:Gln,seq:ttg)
     gene            10915..10989
                     /locus_tag="RHX79_001966"
     tRNA            10915..10989
                     /locus_tag="RHX79_001966"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10947..10949,aa:Gln,seq:ttg)
     gene            11005..11081
                     /locus_tag="RHX79_001967"
     tRNA            11005..11081
                     /locus_tag="RHX79_001967"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11039..11041,aa:Met,seq:cat)
     gene            11130..11204
                     /locus_tag="RHX79_001968"
     tRNA            11130..11204
                     /locus_tag="RHX79_001968"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11162..11164,aa:Gln,seq:ctg)
     gene            11242..11316
                     /locus_tag="RHX79_001969"
     tRNA            11242..11316
                     /locus_tag="RHX79_001969"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11274..11276,aa:Gln,seq:ctg)
     gene            complement(11470..12645)
                     /gene="ubiF"
                     /locus_tag="RHX79_001970"
     CDS             complement(11470..12645)
                     /gene="ubiF"
                     /locus_tag="RHX79_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706550.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
                     hydroxylase"
                     /protein_id="HDV2197144.1"
                     /translation="MTNQPTEIAIVGGGMVGGALALGLAQHGFSVTVIEHAEPAPFVA
                     DSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVMFDAAELKL
                     PLLGYMVENTVLQQALWQALEAHPKVTLRVPGSLIALHRDNDLQELELKGGEVIRAKL
                     VIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPL
                     FDNWASLVWYDSPVRIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHAL
                     QYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY
                     QMRRMADNFIMQSGMDLFYAGFSNNLPPLRFVRNLGLMAAERAGVLKRQALKYALGL"
     gene            12791..14215
                     /gene="miaB"
                     /locus_tag="RHX79_001971"
     CDS             12791..14215
                     /gene="miaB"
                     /locus_tag="RHX79_001971"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDV2197145.1"
                     /translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL
                     LLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII
                     FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY
                     CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSF
                     ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL
                     MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSY
                     SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT
                     SRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRV
                     AETPESVIARTRKENDLGVGYYQP"
     gene            14368..15408
                     /locus_tag="RHX79_001972"
     CDS             14368..15408
                     /locus_tag="RHX79_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415193.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDV2197146.1"
                     /translation="MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRD
                     NHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESV
                     PEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDAL
                     ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIER
                     NVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDL
                     PRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAAL
                     AAERKREEQEQK"
     gene            15405..15872
                     /gene="ybeY"
                     /locus_tag="RHX79_001973"
     CDS             15405..15872
                     /gene="ybeY"
                     /locus_tag="RHX79_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014169133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDV2197147.1"
                     /translation="MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIR
                     VVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGK
                     PLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE"
     gene            15962..16840
                     /gene="corC"
                     /locus_tag="RHX79_001974"
     CDS             15962..16840
                     /gene="corC"
                     /locus_tag="RHX79_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308723.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HDV2197148.1"
                     /translation="MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDS
                     GQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR
                     FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRS
                     QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALA
                     SIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ
                     VHVKIPDDSPQPKLDE"
     gene            16865..18403
                     /gene="lnt"
                     /locus_tag="RHX79_001975"
     CDS             16865..18403
                     /gene="lnt"
                     /locus_tag="RHX79_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDV2197149.1"
                     /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGL
                     QALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLS
                     LYTGLFAGVLSRLWPKTTWLRVAIAAPSLWQVTEFLRGWVLTGFPWLQFGYSQIDGPL
                     KGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQP
                     EKTIQVSMVQGDIPQSLKWDGDQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEIN
                     QQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYN
                     KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSANGIELTAAICYEIIL
                     GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITA
                     VIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLR
                     ARKR"
     gene            complement(18481..20358)
                     /locus_tag="RHX79_001976"
     CDS             complement(18481..20358)
                     /locus_tag="RHX79_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDV2197150.1"
                     /translation="MSASSVKPLNVQLPAITLILFALCIGIFCYLAQWMSYEEVDQSA
                     LIHLGANVAPLTLSGEPWRLLSSIFLHSSVSHLLMNMFAFLVVGGVAEQILGKWRLLI
                     TWLFSGVFGGLISACYALRESEQIVISVGASGAILGIAGAAIATQFASGAGTYHKNQR
                     RVFSLLGMVALTLLYGARQTGIDNACHIGGLIAGGALGWLSARLSGQNRLVTEGGIIV
                     AGSLLLTGAIWLAQQQMDESVLQVRQSLREAFYPQEIEQERRQKKQQLAEERNALRET
                     LSAPVSREQASGDLLAEIADIHDMAISRDGNMLYAAIENTNSIVVFDLGQKKILHTFT
                     APIAKEKSVKHCGGCKDQGVRSLALSPDEKLIYATSFEANALSVINVATGEIIQSITT
                     GAHPDSLILSRDGTKAWVMNRTSNSVSAIDLVAYQHVADIPLEKYDGTGTSGKPGAWV
                     MALSPDERTLLVPGEGRGNIVRINTITHQKEDFPAGDARGTISAMRFRPENGEVIFAD
                     SQGISRISIGDQQTSIMTQWCSRSVYSVEGISPDGQYLALVSYGLQGYVILLNINAGQ
                     IIGVYPASYVNHLRFSADGRKIFVMAKNGLIQMDRTRSLDPQAIIRHPQYGNVACIPE
                     P"
     gene            20813..21721
                     /gene="gltI"
                     /locus_tag="RHX79_001977"
     CDS             20813..21721
                     /gene="gltI"
                     /locus_tag="RHX79_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter
                     substrate-binding protein GltI"
                     /protein_id="HDV2197151.1"
                     /translation="MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVV
                     GHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLL
                     QNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKDKAVVVTS
                     GTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKK
                     PDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPP
                     KNLNMNFELSDEMKALFKEPNDKALN"
     gene            21891..22631
                     /gene="gltJ"
                     /locus_tag="RHX79_001978"
     CDS             21891..22631
                     /gene="gltJ"
                     /locus_tag="RHX79_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltJ"
                     /protein_id="HDV2197152.1"
                     /translation="MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAF
                     LVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKA
                     ELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVL
                     LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA
                     YVLINAVIMLVMTLVERKVRLPGNMGGK"
     gene            22631..23305
                     /gene="gltK"
                     /locus_tag="RHX79_001979"
     CDS             22631..23305
                     /gene="gltK"
                     /locus_tag="RHX79_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltK"
                     /protein_id="HDV2197153.1"
                     /translation="MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM
                     RLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMV
                     AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT
                     QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSY
                     LKRRTA"
     gene            23305..24030
                     /gene="gltL"
                     /locus_tag="RHX79_001980"
     CDS             23305..24030
                     /gene="gltL"
                     /locus_tag="RHX79_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020245804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter ATP binding
                     protein GltL"
                     /protein_id="HDV2197154.1"
                     /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI
                     KTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ
                     VKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLF
                     DEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS
                     PKDAFFDDPKSDRAKDFLAKILH"
     gene            24148..25083
                     /gene="rihA"
                     /locus_tag="RHX79_001981"
     CDS             24148..25083
                     /gene="rihA"
                     /locus_tag="RHX79_001981"
                     /EC_number="3.2.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-specific ribonucleoside hydrolase
                     RihA"
                     /protein_id="HDV2197155.1"
                     /translation="MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTLEK
                     TLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNC
                     TAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWT
                     PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAE
                     LLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYSQGMTVV
                     DYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA"
     gene            25167..26837
                     /gene="hscC"
                     /locus_tag="RHX79_001982"
     CDS             25167..26837
                     /gene="hscC"
                     /locus_tag="RHX79_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000367910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HscC"
                     /protein_id="HDV2197156.1"
                     /translation="MDNAELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIIS
                     MDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSL
                     KEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMVYGL
                     HTQQNTRSLVFDLGGGTFDVTVLEYATPVIEVHASAGDNFLGGEDFTHMLVDEVLKRA
                     DVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQDETRECEFYENELEDLWLPLL
                     NRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIV
                     ALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRV
                     ETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGL
                     LEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKAKLEE
                     LWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASVYLAIETS"
     gene            complement(26897..28348)
                     /gene="djlC"
                     /locus_tag="RHX79_001983"
     CDS             complement(26897..28348)
                     /gene="djlC"
                     /locus_tag="RHX79_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlC"
                     /protein_id="HDV2197157.1"
                     /translation="MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQ
                     AYEEALRLAVNPVEEADDEEKDAAAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNT
                     WNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAI
                     QAGDCFDFLSLLEYPVALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDAKL
                     HRKLLRWYSSVQTGMAELIPVAKQWQMEEPESEDARYYLCAQRLYCGEGESLLADLCA
                     YRESYPSTQADNLLLQWSKSHCPDYFALLVMVIEARSMVDAQGLPLKYVPGESARTRL
                     LWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEEDSPLLDLYRVAEQVVL
                     EAFPKQEMLARLNTRLEGGDAHPLEAIITRMLLTKVKLEPEDEDVDEPTPENHEEKND
                     EGEKPQSITSIIKISLTVLVIGYALGKIAMLFS"
     gene            complement(28345..29052)
                     /locus_tag="RHX79_001984"
     CDS             complement(28345..29052)
                     /locus_tag="RHX79_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HDV2197158.1"
                     /translation="MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFDLSSS
                     WGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFV
                     AQTAMCCGEGGIKAWDYVRMGFLSRVGVLNNWLTEEESLWLQSRVYVRAHHYYHSWMH
                     YFSAYSLGRLYWQSSQCEDNTSLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQP
                     LTVQPECPVTLKDVSDL"
BASE COUNT         7154 a         7559 c         7342 g         7026 t
ORIGIN      
        1 attgcgaagc ggaattaatt cgcgaagaaa agcagaaaaa acgccgcaga gtgcggcgtt
       61 tgggattgtt tgctatttct tgccggatgc gacgtaaatg cctcacccgg cctggtagaa
      121 cttaaaatta ctcgcctact ttcgcccagg tatcacgcag cccaacggtg cggttaaata
      181 ccggtttttc cgctgtggaa tggcggctgt cgaggcagaa gtaaccttca cgctcaaact
      241 ggaatgcttt acccgcaacc gcatctttca gcgacggttc agcaaagccc tgtttgatca
      301 ccagcgattc cgggttaatc accgacagga aatcatccgc agcaccaggg ttcggcacgc
      361 tgaacagacg gtcgtacaga cggatttcaa ccggcagcgc atgtgccgcg ctcacccagt
      421 gaataacacc tttgacttta cgaccatctg ccggatcttt gcttaaggtg tcggcgtcat
      481 aagtacagaa gatggtggtg atattgcctt cggcatcttt ctccacgcgt tcagccttaa
      541 tgacgtaagc attacgcaga cgcacttctt tacccagcac cagacgtttg tactgcttgt
      601 tagcttcttc gcggaaatcg gcgcgatcga tccaaatctc accgctaaac ggcacctgac
      661 ggctccccat ttccggtttg ttcggatggt tcggcatggt gaccatttcg ccttcgccct
      721 gatagttttc gataaccagt ttcaccggat cgataaccgc cattgcgcgc ggcgcatttt
      781 cgttgagatc ttcacggatg caggattcca gcgacgccat ctcaatggtg ttgtcctgct
      841 tggtcacgcc aatgcgtttg cagaactcac gaatagaagc cgcagtgtaa ccacgacgac
      901 gcagaccaga aatggtcggc atacgcgggt catcccagcc ttcaacgtgc ttgtcggtca
      961 ccagcaggtt cagcttacgc ttggacatca cagtgtattc cagattcagg cgcgagaatt
     1021 cgtactggcg cgggtgaaca ggaatggtga tgttgtccag cacccagtcg tacaggcgac
     1081 ggttgtcctg gaactcaagc gtacacagag agtgcgtaat accttccagg gcatcgctga
     1141 tgcagtgggt gaagtcgtac atcgggtaga tgcaccactt gttgccagtc tggtggtgtt
     1201 cagcaaattt aatacggtac agcaccggat cgcgcatcac gataaacggt gaagccatgt
     1261 cgattttcgc acgcaggcag gctttacctt cttcaaaacc accggcacgc attttttcga
     1321 acagcgccag gttctcttca acgctgcggt cgcggtacgg gctgttttta cccggttgcg
     1381 tcagggtgcc gcggtattcg cggatctgtt ccggcgtcag ttcatcaacg tacgccaggc
     1441 ctttattgat cagttcgatc gcataggcgt ggagctgatc aaaataatcg gaggagtaac
     1501 ggacgttacc agaccagtga aaacctaacc actctacgtc gtttttgatc gactcaacat
     1561 actcgatatc ttcttttacc gggttagtgt cgtcgaaacg caggttgcac tggcctttat
     1621 agtcctgggc gatcccgaag ttcaggcaga tagatttcgc atggccaata tgcagatagc
     1681 cattcggctc cggcgggaaa cgggtgtgta ctgtggtgtg cttaccactg gccagatctt
     1741 catcgatgat ctgacggata aagttagtcg ggcgggcttc tgcctcactc atcgtggatt
     1801 cctcaaagcg taaacaacgt ataacggcgt atgatcttat aagcgggaca ggctgacaac
     1861 tgttagtttt ttaaaattga taatctaaca aggattatgg ggatgattga tgaaaaaaaa
     1921 agcggcagag aagatctcca ccgcttgtca ttgttggatg cgacgctcaa gcgtcgcatc
     1981 aggcataaag cagattactt tttgatttca tacagcggtg tttgacccgc cacaacatgg
     2041 ccctgagctt taatgatcaa gccactgaaa tcgtcgatat tgctgcaaac caccgggcta
     2101 atcatcgagc gggcgttagc gttcaggtaa tccagatcca tttccagaat cggttgccct
     2161 gcgcttacct gcgcaccctc ttccaccaga cgtttaaagc ctttaccttc cagcgctacg
     2221 gtgtcgatac ccatatggac gacgatctcc gcgccttttt cggtttccag gcagaacgcg
     2281 tggttggtgt tgaagatttt cacgattgtc cctgcggctg gtgatacgac gattttatct
     2341 gtcggtttca ccgccacacc gtcacccacc gctttgctgg cgaatgcttc gtcaggaacc
     2401 tgatccagtg ccacgacatc accggtaatc ggcgatacca gctccgcgat agataccgcg
     2461 tttggtacag cctgcggttt tgctacaggc gcggcagttg ccggagttgc ttcagctgac
     2521 gcagcggcta ccggaccacg ggcaacgact ttcttcatcg catcgccgat ggattctgct
     2581 ttcgcgccaa caatcacctg aatagtctgt ttgttcagtt tcactacacc agaagcaccc
     2641 agacgtttac acatcgtatc gttgacgcgg gcagagtcag ccacggtcag gcgcagacgg
     2701 gtgatacagg cgtcaattgc tttcaggttg tcagtgccgc caaccgcagc aatatagttg
     2761 gtcgccagtt gattgaggcc ttcttcagtg ttgctgttgg cttcttcagt aacgatctcg
     2821 tcttctttat cttcacgacc cggcgttttc aggttgaaca tgcggataac caaactgaac
     2881 accacgaagt agatagcgaa gaagacaaca cccataacca gcagcatcca gacgttctgg
     2941 ctggcggccg gcaggttata catcaacgcg tagtcgatag cccccgcaga gaaagagaag
     3001 ccagcatgga tacccagcag tgttgccaca aacaggctga taccggtcag cagtgcgtgc
     3061 aggaggtaca gcagcggtgc aaggaacatg aacaggaatt ccagcggctc agtcacaccg
     3121 gtcaggaacg cagtaacagc aacagaaagc agcatcccgc caaccatcgg acgacgctct
     3181 ttcggtgctg cgaagtacat cgccagcgcc gcacccggca gaccgaacat cataatcggg
     3241 aagaagccgg acatgaacat ccccgcggtg ccgtcaccgg catagaagcg gttgatatca
     3301 ccgtggaaaa ccgtacccgc cgcgttggtg aattcaccaa tctggaacca ggcgatggtg
     3361 ttcagcacct gatgcagacc ggttgggatc agcagacggt tgatgaaacc aaagataccg
     3421 gaacccagcg cgcccgcaga aacgatccac tcgcctcctg catggatagc gtgctgtacc
     3481 ggcggccaga cgtaaccaaa aatggccgcc agcaccaggc agaagaagcc ggtggcaatc
     3541 ggcacaaagc gtttgccgcc gaagaagctc aggaagtccg gcagtttaat atcggaccaa
     3601 cggttatagg ctgcgccacc aaccagaccg gtaatgatac ccgccagtac acccatgttt
     3661 atttctgggt tgatggtcac catcgctttg gttaacacaa agtaacctac cgcacccgcc
     3721 agcgccgccg cacctgcgct gtctttcgac cagctggatg ccacaccgat ggcgaagatt
     3781 aatgcgaggt tatcaaaaat cgcaccgccc gcctgggcaa taaacgcaac gttaagtaaa
     3841 tctggctgac cgaatcgcag caacagtgcc gccaccggca gcaccgcgat agggagctgt
     3901 aacgccctac cgagtcgctg gaaaaaacct aaaatattca tcttattccc cctacgagaa
     3961 ccctatttgg ctcgtttaaa gccgtatttt tattttgctg caaattgtac tgccgatgtt
     4021 ctgtaatcag attgttagat catctgctac agagtgtgtg aaaatttaat tcgtatcgca
     4081 aattaaacgc gtgtcttttg tgagttttgt caccaaatat cgttatcatc actccctttt
     4141 actggctaaa ccagaaaact tattttatca ttcaaaaaat caggtcggat tgacgcctgt
     4201 ctgcgcaaat ccaggttacg cttaaagatg cctaatccgc caacggctta cattttactt
     4261 attgaggtga ataatgagac tgatccccct gactaccgct gaacaggtcg gcaaatgggc
     4321 tgctcgccat atcgtcaatc gtatcaatgc gttcaaaccg actgccgatc gtccgtttgt
     4381 tctgggcctg ccgactggcg gcacgccgat gaccacctat aaagcgttag tcgaaatgca
     4441 taaagcaggc caggtcagct ttaagcacgt tgtcaccttc aacatggacg aatatgtcgg
     4501 tctgccgaaa gagcatccgg aaagctacta cagctttatg caccgtaatt tcttcgatca
     4561 cgttgatatt ccagcagaaa acatcaacct tctcaacggc aacgccccgg atatcgacgc
     4621 cgaatgccgc cagtatgaag aaaaaatccg ttcttacgga aaaattcatc tgtttatggg
     4681 cggtgtaggt aacgacggtc atattgcatt taacgaaccg gcgtcttctc tggcttctcg
     4741 tactcgtatc aaaaccttga ctcatgacac tcgcgtcgcg aactctcgtt tctttgataa
     4801 cgatgtcaat caggtgccaa aatatgccct gactgtcggt gttggtacat tgctggatgc
     4861 cgaagaagtg atgattctgg tgctgggtag ccagaaagca ctggcactgc aggctgcagt
     4921 tgaaggttgc gtgaaccaca tgtggaccat cagctgtctg caactgcatc caaaagcgat
     4981 catggtgtgc gatgaacctt ccaccatgga gctgaaagtt aagactttaa gatatttcaa
     5041 tgaattagaa gcagaaaata tcaaaggtct gtaattgtta tccctgccct ggctccttgc
     5101 tcagggcaat attttttaaa atcgggggtc agaatgtatg cattaaccca gggccggatc
     5161 tttaccggcc acgaatttct tgatgaccac gcggttgtta tcgctgatgg cctgattaaa
     5221 agcgtctgtc cggtagcgga actgccgcca gaggtcgaac aacgttcact gaacggggcc
     5281 attctctccc ccggttttat cgatgtgcag ttaaacggct gcggcggcgt acagtttaac
     5341 gacaccgctg aagcggtcag cgtggaaacg ctggaaatca tgcagaaagc caatgagaaa
     5401 tcaggctgta ctaactatct gccgacgctt atcaccacca gcgatgagct gatgaaacag
     5461 ggcgtgcgcg ttatgcgcga gtacctggca aaacatccga atcaggcgtt aggtctgcat
     5521 ctggaaggtc cgtggctgaa tctggtaaaa aaaggcaccc ataatccgaa ttttgtgcgt
     5581 aagcctgatg ccgcgctggt cgatttcctg tgtgaaaacg ccgacgtcat taccaaagtg
     5641 accctggcac cggaaatggt tcctgcggaa gtcatcagca aactggcaaa tgccgggatt
     5701 gtggtttctg ccggtcactc caacgcgacg ttgaaagaag caaaagccgg tttccgcgcg
     5761 gggattacct ttgccaccca tctgtacaac gcgatgccgt atattaccgg tcgtgaaccg
     5821 ggcctggcgg gcgcgatcct cgacgaagct gacatttatt gcggtattat tgctgatggc
     5881 ctgcatgttg attacgccaa cattcgtaac gctaaacgtc tgaaaggcga caaactgtgt
     5941 ctggttaccg acgccaccgc gccagcaggt gccaacattg aacagttcat ttttgcgggt
     6001 aaaacaatat actaccgtaa cggactttgt gtggatgaga acggtacgtt aagcggttca
     6061 tccttaacca tgattgaagg cgtgcgtaat ctggtcgaac attgcggtat cgcactggat
     6121 gaagtgctgc gtatggcgac gctctatccg gcgcgtgcga ttggcgttga gaaacgtctc
     6181 ggcacactcg ccgcaggtaa agtagccaac ctgaccgcat tcacacctga ttttaaaatc
     6241 accaagacca tcgttaacgg taacgaggtc gtaactcaat aagagaaagt atgacaccag
     6301 gcggacaagc tcagataggt aatgttgatc tcgtaaaaca gcttaacagc gcggcggttt
     6361 atcgcctgat tgaccagtac gggccaatct cgcggattca gattgccgag caaagccagc
     6421 ttgcccccgc cagcgtaacc aaaattacgc gtcagcttat cgaacgcggg ctgatcaaag
     6481 aagttgatca gcaggcctcc accgggggcc gccgcgctat ctccatcgtc accgaaaccc
     6541 gcaatttcca cgcaatcggc gtacggcttg gtcgtcacga cgccaccatc accctgtttg
     6601 atctcagcag caaagtgctg gctgaagaac attacccgct gccggaacgt acccagcaaa
     6661 cgctggaaca tgccctgttg aatgccattg ctcagtttat tgatagctac cagcgcaaac
     6721 tgcgcgagct gatcgcgatt tcggtgatcc tgccagggct tgttgacccg gacagcggca
     6781 aaattcatta catgccgcat attcaggtag aaaactgggg gctggtagaa gctctggaag
     6841 aacgttttaa agtgacctgt ttcgttggtc acgatatccg tagtctggcg ctggcggagc
     6901 actacttcgg tgcaagtcag gattgcgaag actccattct ggtgcgtgtc catcgcggaa
     6961 ccggggccgg gattatctct aacgggcgca tttttattgg ccgcaacggt aacgtcggtg
     7021 aaattggcca tattcaggtc gaaccgctgg gtgaacgctg ccactgcggc aactttggct
     7081 gcctggaaac tatcgccgcc aacgctgcca ttgaacaacg ggtgctgaat ctgttaaagc
     7141 agggctacca gagccgcgtg ccgctggacg actgcaccat caaaactatc tgcaaagccg
     7201 cgaacaaagg cgatagtctg gcgtcggaag taattgagta tgtcggtcgt catctgggta
     7261 aaaccatcgc cattgctatc aacttattta atccgcaaaa aattgttatt gccggtgaaa
     7321 tcaccgaagc cgataaagtg ctgctccctg ctattgaaag ctgcattaat acccaggcgc
     7381 tgaaggcgtt tcgcactaat ctgccggtgg tacgttctga gctggatcac cgctcggcaa
     7441 tcggcgcttt tgcgctggta aaacgcgcca tgctcaacgg tattttgctc cagcatttgc
     7501 tggaaaatta atgtgctttt atagtggcgc ttattgttgt caatattctg ggtagtccat
     7561 gaccattaaa aatgtaattt gcgatatcga cggcgtgctg atgcacgata acgtcgccgt
     7621 accgggtgca gcggaatttt tgcacgggat tatggataaa ggcctgccgc tggtgttgct
     7681 gaccaactat ccttcgcaga ccgggcaaga tctggcgaac cgctttgcca ctgccggtgt
     7741 cgatgtgccg gatagcgtgt tttatacctc tgcgatggcg actgccgatt tcctgcgtcg
     7801 ccaggaaggc aagaaagcgt atgtggtggg cgaaggcgca ctgattcatg aactgtacaa
     7861 agccggtttc actattaccg atgtgaaccc tgattttgtg attgttggcg aaacgcgttc
     7921 ctacaactgg gacatgatgc ataaagcggc ctatttcgtc gctaacggtg cacgctttat
     7981 cgccaccaac ccggacaccc acgggcgcgg tttttatccc gcttgtggcg cgttgtgtgc
     8041 agggattgag aaaatctccg ggcgcaaacc gttctatgtt ggtaagccca gcccgtggat
     8101 catccgcgcg gcattaaaca aaatgcaggc gcattcggaa gaaacggtga ttgtcggcga
     8161 taacttgcgc accgacattc tggcgggctt ccaggcgggt ctggagacga ttctggtgct
     8221 ttctggtgtt tcatcgctcg acgatatcga cagtatgccg ttccgcccaa gctggattta
     8281 cccgtcggtc gctgaaatcg acgttatctg aatagcaacc acgtctcagg gcgtggtttc
     8341 ttatttttac ccatcattaa aatcatccca ttcaataaaa ctcgccaaaa attatcgatc
     8401 catcaataaa tacatcacca caccctcccc tttttcacaa atcagcaatc accattacgt
     8461 tttttatttt tgcactgcca aatcgcttgc gcacggtgct gctttgcggc atttttttaa
     8521 acaagcaaac acaacaagca acaaatacca ggttaacgga gaaggttatg tgttcaattt
     8581 ttggcgtatt cgatatcaaa acagacgcag ttgagctgcg taagaaagca ctcgagctgt
     8641 cacgcctgat gcgtcatcgt ggcccggact ggtccggtat ttatgccagc gataacgcca
     8701 ttctcgccca cgaacgtctg tcaattgttg acgttaacgc gggggcgcaa cctctctaca
     8761 accaacaaaa aactcatgtg ctggcggtaa acggtgaaat ctacaaccac caggcactgc
     8821 gcgccgaata tggcgatcgt tatcagttcc agaccggatc tgactgcgaa gtgatcctcg
     8881 cgctgtatca ggaaaaaggg ccggaatttc tcgacgactt gcagggcatg tttgcctttg
     8941 ccctgtacga cagcgaaaaa gatgcatatc tgattggtcg cgaccatctg gggatcatcc
     9001 cactgtatat gggctatgac gagcacggtc agctgtatgt agcctcagaa atgaaagccc
     9061 tggtgccagt ttgccgcacg attaaagagt tcccggcggg gagctatttg tggagtcagg
     9121 acggcgaaat ccgttcttat tatcatcgcg actggttcga ctttgatgca gtgaaagata
     9181 acgtgaccga caaaaacgag ctgcgtcagg cactggaaga ttccgttaaa agccatctga
     9241 tgtctgacgt tccttacggt gtgctgctct cgggtggtct ggattcctca attatttccg
     9301 cgatcaccaa gaaatacgcc gcccgtcgcg tggaagatca ggaacgctct gaagcctggt
     9361 ggccgcaatt acactccttt gctgtaggtc tgccgggttc accggatctg aaagcagccc
     9421 aggaagtggc aaaccatctg ggcacggtgc atcacgaaat tcacttcact gtacaggaag
     9481 gtctggatgc catccgcgac gtgatttacc acatcgaaac ctatgatgtg acaactattc
     9541 gcgcttcaac accgatgtat ttaatgtcgc gtaagatcaa ggcaatgggc attaaaatgg
     9601 tgctgtccgg tgaaggttct gatgaagtgt ttggcggtta tctttacttc cacaaagcac
     9661 cgaatgccaa agaactgcat gaagagacgg tgcgtaaact gctggccctg catatgtatg
     9721 actgcgcgcg cgccaacaaa gcgatgtcag cctggggcgt ggaagcacgc gttccgttcc
     9781 tcgacaaaaa attccttgat gtggcgatgc gcattaaccc gcaggataaa atgtgcggta
     9841 acggcaaaat ggaaaaacac atcctgcgtg aatgttttga gtcatacctg cccgcaagcg
     9901 tggcctggcg gcagaaagag cagttctccg atggcgtcgg ttacagttgg atcgacaccc
     9961 tgaaagaagt ggcggcgcag caggtttctg atcagcaact ggaaactgcc cgcttccgct
    10021 tcccgtacaa cacgccaacc tcaaaagaag cgtatctgta ccgggagatc tttgaagaac
    10081 tgttcccgct tccgagcgcc gctgagtgcg tgcctggcgg tccttccgtc gcgtgttctt
    10141 ccgctaaagc gattgagtgg gatgaggcgt tcaagaaaat ggacgatccg tctggtcgtg
    10201 cggttggcgt tcaccagtcg gcgtataagt aagaaatgcg aaacagcccc ggtgaaatcc
    10261 ggggctgttt cagttattga ggtgcttgtt aattctgata tgcagtaagg aaatgttccg
    10321 ggtttgccac atcactgttt gacaactcat cactgtaggc cagtatttca tagattaatt
    10381 tcccaccact attgttgaat tccgaatttc atcctgtacg acaaaagaat ggctgtaggg
    10441 tggggaaaaa acacaaagta aacaataatt gacgaatata gcgccacgct gttcgcaacc
    10501 taaccaaaca gtcactttcg agcaattttc cttgaaaaag aggttgacgc tgcaaggctc
    10561 tatacgcata atgcgccccg caacgccgat aaggtatcgc gaaaaaaaag atggctacgt
    10621 agctcagttg gttagagcac atcactcata atgatggggt cacaggttcg aatcccgtcg
    10681 tagccaccat cttttttgcg ggagtggcga aattggtaga cgcaccagat ttaggttctg
    10741 gcgccgcaag gtgtgcgagt tcaagtctcg cctcccgcac cattcaccag aaagcgttgt
    10801 acggatgggg tatcgccaag cggtaaggca ccggtttttg ataccggcat tccctggttc
    10861 gaatccaggt accccagcca tcttcttcga gtaagcggtt caccgcccgg ttattggggt
    10921 atcgccaagc ggtaaggcac cggtttttga taccggcatt ccctggttcg aatccaggta
    10981 ccccagccat cgaagaaaca atctggctac gtagctcagt tggttagagc acatcactca
    11041 taatgatggg gtcacaggtt cgaatcccgt cgtagccacc aaattctgaa tgtgtcgaat
    11101 acgttcggca aatttaaaaa ccaatttgtt ggggtatcgc caagcggtaa ggcaccggat
    11161 tctgattccg gcattccgag gttcgaatcc tcgtacccca gccaatttat tcaagacgct
    11221 tacatcgtaa gtgcgcccag ttggggtatc gccaagcggt aaggcaccgg attctgattc
    11281 cggcattccg aggttcgaat cctcgtaccc cagccacatt aaaaaagctc gcttcggcga
    11341 gctttttgct tttctgcgtt cattcaatgt cgaatgcgat gttgacacgt cttatccttc
    11401 aatgtcggat gcgacgctgc cgcgtcttat ccgacctacg gttggcacgc atccggcaat
    11461 gttgtaaggc tacaacccta acgcatattt cagcgcctga cgtttcaaca cgccagcacg
    11521 ctccgccgcc atcaaaccaa gattacgcac aaaacgcagc ggcggcagat tattactgaa
    11581 tccggcataa aacagatcca taccactttg cataatgaag ttatccgcca tgcgccgcat
    11641 ctggtaacgc ttgaggacag gataactggc ccacgcttca ccgtagctgc gggcattcac
    11701 cagaacatca atcagggcat cgacatcacg ataaccaaga ttcaccccct gccccgccag
    11761 cggatggatg gtatgcgcgg catcgcccac cagcgcaagc cccggctgca catactgcaa
    11821 cgcatgtcgg cgcgtcagcg gaaacgcacc agcggcaagc ggtgtaacgt aacccagacg
    11881 cgacgggaaa tgcttcgcga tttccgcctg gagttgcgcc atattcatat tctgcaactg
    11941 gcgaatacgt accggagagt cataccacac cagcgatgcc cagttatcaa acaacggcag
    12001 aaacgcacgc ggtccgtccg gggtaaattg ctgccaggtg ctgtcgccgg gatcgttctc
    12061 acactgtacg ctaatcaaca tacacgactg cgcatactgc caggcatgaa cgccaattcc
    12121 cgccatctgc cgcacctgcg aatttgcgcc gtcagcacca atcaccagct tcgcgcgaat
    12181 cacttcaccg cccttcagtt ccagctcctg aagatcatta tctcgatgta atgcaatcag
    12241 cgagcctggc acacgtaacg ttactttcgg atgagcttcc agcgcctgcc acaatgcctg
    12301 ttgcaggacg gtgttttcca ccatatagcc aagcagcggc agcttaagtt cagcggcgtc
    12361 aaacatcaca tgcgccgttt cccactccca cgtttccagt ctgcggtaag gatggcaacg
    12421 catagcctgt actgcatccc agacccctaa ccctttaagc aatgataccg atgcggcgct
    12481 gatcgccgag atccgcacgt ccggttggct atcagcgaca aacggtgcag gttctgcgtg
    12541 ctcgatcacc gttaccgaaa atccgtgctg tgccagcccc agcgccagtg cgccgccgac
    12601 cattcctccg ccgacaatgg caatttccgt tggttgattt gtcatggtca atcatcctgt
    12661 tagcaatatg ctttaagttt acaggatttt tacccccaag ggctgataac gctcatactg
    12721 gtcacaacgg cagcaaagca ttacactatg cgccctgcat tcctggctac tatttcgcaa
    12781 gagcaagtcg atgaccaaaa aactccatat taaaacctgg ggctgtcaga tgaacgagta
    12841 cgattcatcg aagatggccg atctgctgga tgccacccac ggctatcaac tgaccgacgt
    12901 ggcggaagaa gcggatgtgc tgctgctgaa cacctgctca atccgcgaga aggctcagga
    12961 aaaagtcttc catcagttgg gtcgctggaa actgttaaaa gagaagaatc cagacctgat
    13021 tatcggcgtc ggtggctgcg tggcatcgca agaaggcgag cacattcgcc agcgcgccca
    13081 ctatgtcgat attatttttg ggccgcaaac gctgcaccgt ctgccggaga tgatcaactc
    13141 cgtgcgcggc gaccgcagcc cggttgtaga tatcagcttc ccggaaatcg agaagtttga
    13201 ccgtctaccg gaaccgcgcg ccgaagggcc gaccgcgttt gtctccatca tggaaggctg
    13261 caataaatat tgtacctact gcgtggtgcc ttacacccgt ggtgaagagg taagccgtcc
    13321 gtctgacgat attctgtttg agattgccca gcttgctgct cagggcgtgc gtgaagtcaa
    13381 cctgctcggt cagaacgtga acgcctggcg tggtgaaaac tacgacggca ccaccggatc
    13441 gtttgccgat ctgctgcgtc tggttgctgc gatcgacggg atcgatcgta ttcgctttac
    13501 caccagccat ccgatcgaat tcaccgacga tatcatcgaa gtgtaccgcg acacgcctga
    13561 gctggtgagc ttcctgcatc tgccggtaca aagcggttcc gatcgcattc tgaacctgat
    13621 gggccgtact cacacggcgc tggagtacaa agcgatcatc cgtaaactgc gtgcggcgcg
    13681 tccggatatt cagatcagtt ctgacttcat tgttggcttc cctggcgaaa ccaccgaaga
    13741 cttcgagaaa acgatgaagc tgattgccga cgtcaatttc gacatgagct acagctttat
    13801 cttctctgca cgtccgggga cgcccgccgc cgatatggtg gatgatgttc cggaagaaga
    13861 gaagaagcag cgtctgtata ttctgcaaga gcgcattaat cagcaagcga tggcgtggag
    13921 ccgccggatg ctcggcacca cccagcgtat tctggtagaa gggacttcgc gtaagagcat
    13981 catggagctt tccgggcgta ccgaaaataa ccgcgtggtc aacttcgagg gcacaccgga
    14041 tatgatcggt aaattcgtcg atgtagaaat taccgacgtc tacccgaact ctctgcgcgg
    14101 taaagtggtg cgtactgaag atgaaatggg tctgcgcgtg gcagaaacac cggaatcggt
    14161 gattgcccgt acccgcaaag aaaacgacct tggcgtgggt tattatcagc cgtaattctc
    14221 aggcccgccg ttccggtggg ccttgttttt tctctcttta tccccatctt tatcgcaatg
    14281 cttgcgcctt tttcctgtgg cgtgaataat ttccttatag gccggtgaat gttcagcttc
    14341 cggcgacata cagataagag gaacggtttg aacatagaca ctcgcgaaat caccctggag
    14401 ccagcagaca acgcgcgtct gttgagcctg tgcggcccgt ttgatgacaa catcaagcag
    14461 ctcgaacgcc gtctcggcat cgagatcaat cgccgcgaca accactttaa actgaccggc
    14521 cgtccgattt gcgtcaccgc tgcggcagac attctgcgta gcctgtatgt cgatacagcc
    14581 ccgatgcgcg gtcagattca ggatatcgaa ccggaacaga tccaccttgc gattaaagaa
    14641 gcgcgagtac tggagcaaag tgcggagagc gtgccggagt acggcaaagc ggtcaatatc
    14701 aaaaccaaac gcggcgtaat taagccgcgc acgccaaacc aggcgcagta catcgccaat
    14761 attctcgacc atgacattac cttcggcgtt ggcccggcgg gtacgggtaa aacctacctg
    14821 gcagtggctg cggcagttga tgccctggag cgtcaggaga ttcgccgtat tctgctgact
    14881 cgtccggcgg tcgaagccgg tgagaaactg ggcttcctgc ctggcgattt aagccagaaa
    14941 gtagacccgt atctgcgccc gctgtacgac gcgctgtttg aaatgctggg ctttgagaaa
    15001 gttgagaaac tgattgagcg caacgttatt gaagtcgcgc cgctggccta tatgcgtggt
    15061 cgtacgctga acgacgcgtt tatcattctc gatgagagcc agaacaccac catcgaacag
    15121 atgaagatgt tcctgacccg tatcggtttt aactcaaaag cggttatcac cggcgacgtc
    15181 acacagatcg acctgccgcg taatactaaa tcaggcttac gtcacgccat cgaagtgctg
    15241 gccgatgtcg aagagatcag ctttaacttc ttccacagcg aagacgtggt tcgtcaccct
    15301 gtggtggcgc gtatcgttaa cgcctatgaa gcctgggaag aagccgaaca aaaacgaaaa
    15361 gcggcgctgg cggcagaacg caagcgcgaa gaacaggaac aaaaatgagt caggtgatcc
    15421 tcgatttaca actggcatgt gaagataatt ccgggttacc ggaagagagc cagtttcaaa
    15481 catggctgaa tgcggtgatc ccgcagtttc aggaagaatc ggaagtgact attcgcgtgg
    15541 tcgataccgc cgaaagccac agtctgaatc tgacctatcg cggtaaggat aagccgacca
    15601 acgtgctctc cttcccgttt gaagtgccgc ctggcatgga aatgtcgcta ctgggcgatc
    15661 tggttatctg ccgtcaggtg gttgagaagg aagctcagga gcaaggcaaa ccactggagg
    15721 cgcactgggc gcatatggtg gtgcacggca gtctgcattt gttaggttac gatcacatcg
    15781 aagatgacga agcagaagaa atggaagccc tcgaaacaga gattatgctt gctctgggct
    15841 atgaggatcc gtacattgcc gagaaagaat aatttgccag gcatttgact ggcagacgtc
    15901 cccgccgttg gtgattaacg acggcgtttt gattaactaa catgagaacc catacgacgc
    15961 catgagcgac gacaattcac acagtagtga cacgataagc aacaagaagg gatttttctc
    16021 cctgttactc agccaacttt tccacggtga accgaaaaac cgtgacgaac tgctggcgct
    16081 gatccgtgat tccgggcaga acgaccttat cgacgaagat acgcgcgata tgctcgaagg
    16141 ggtgatggac atcgcagacc aacgcgttcg cgacatcatg atcccccgct cccagatgat
    16201 taccctgaaa cgcaaccaga cgctggacga atgccttgat gtcatcatcg agtccgccca
    16261 ctcacgtttc ccggtgatta gcgaagacaa agatcacatt gaagggattc tgatggcgaa
    16321 agacttgctg ccgtttatgc gcagcgatgc tgaagccttc agcatggaca aagtgttacg
    16381 tcaggcggtt gtcgttcctg aaagtaagcg cgtagaccgg atgctgaaag agtttcgctc
    16441 tcagcgttac cacatggcga tcgttattga cgaattcggt ggggtttccg gtctggtgac
    16501 cattgaagac atcctggaac taattgttgg tgagattgaa gacgagtatg acgaagaaga
    16561 tgatatcgac ttccgtcagc tgagtcgtca tacctggacc gtgcgcgcac tggcttccat
    16621 tgaagacttc aacgaagcgt tcggcaccca ctttagcgat gaagaggttg acactatcgg
    16681 tggtctggtg atgcaggcat ttgggcatct tccggcgcgt ggcgaaacta tcgacatcga
    16741 cggttaccag ttcaaagtgg cgatggccga cagtcggcgt attattcagg ttcatgtcaa
    16801 aatcccggat gactcacccc agccgaagct ggatgaataa aaccgaaact ggatagataa
    16861 ctacatggct tttgcctcat taattgaacg ccagcgcatt cgcctgctgc tggcgttatt
    16921 attcggtgcc tgcggaacgc tggccttctc tccttacgat gtctggcctg cggcgattat
    16981 ttcgctgatg gggcttcagg cgttgacctt taaccgccgt ccactccagt ctgccgctat
    17041 tggcttttgc tggggatttg gcctctttgg cagcggtatt aactgggtct atgtcagcat
    17101 cgcgaccttt ggcgggatgc ctggcccggt taacatcttc ctggtggtgc tgctggcggc
    17161 gtatttgtcg ctgtataccg gactgtttgc tggcgtgctg tcgcgtctgt ggccgaaaac
    17221 cacctggctg cgcgtggcga ttgccgcccc ttctctctgg caagtgaccg agtttctgcg
    17281 cggttgggta ctgacaggct tcccgtggtt acagttcggc tatagccaga ttgatggccc
    17341 gttaaaaggg ctggcaccga taatgggcgt ggaagccatt aacttcctgc tgatgatggt
    17401 tagtggcctg ctggcactgg cgttggtcaa acgcaactgg cgtccgctgg tggtggccgt
    17461 cgtgctgttt gccctaccct tcccgctgcg ttacatccaa tggtttaccc cacaaccgga
    17521 gaaaaccatt caggtttcga tggttcaggg cgatattccg caatcactga aatgggatgg
    17581 agatcagctt cttaatacgc tgaagattta ctacaacgca acggctccgc tgatgggcaa
    17641 atcatcgttg attatctggc cggagtcggc gataaccgat ctggaaatta atcagcaacc
    17701 gttcctcaaa gcactggacg gtgagttgcg cgataaaggt agctcgctgg taaccgggat
    17761 tgtcgacgcg cgtctcaata agcagaaccg ctacgatacc tacaacacca tcatcacgct
    17821 gggtaaaggt gcaccgtaca gctacgaatc agccgatcgc tataacaaaa accatctggt
    17881 gccgtttggc gagtttgtcc cgctggagtc gattctgcgt ccgttagcac cgttctttga
    17941 tctgccgatg tcgtcgttca gccgtgggcc atatatccag ccaccgctgt cggcaaatgg
    18001 tattgagctt actgcggcta tttgctacga gatcattctc ggcgagcaag tgcgcgataa
    18061 cttccgcccg gataccgact atctgctgac tatctccaac gatgcgtggt ttggtaagtc
    18121 tattggtcca tggcagcact tccagatggc gcgaatgcgt gcgctggagc tggcgcgccc
    18181 actgttgcgc agcaccaaca acggcattac ggcggtgatt ggcccgcagg gtgagattca
    18241 ggcgatgatc ccgcagttca cccgcgaggt gttgaccact aatgtgacac cgaccaccgg
    18301 actcacaccg tatgcacgta ccggcaactg gccgctgtgg gtgctgacgg cgctgtttgg
    18361 ttttgccgct gtgctgatga gtctgcgagc acgtaaacgt tgatgtgcct gatgtatcct
    18421 gcatgagcaa aacgtacttt ctcattaagc tttggggcat ggttatcatg cccctttttc
    18481 ttacggttca gggatacaag ccacattgcc atattgggga tgacgaataa ttgcctgcgg
    18541 atcaagcgag cgcgtcctgt ccatttggat caacccgttc ttcgccatga caaatatttt
    18601 tctaccatcc gctgaaaaac gaaggtgatt aacgtagctg gcaggataaa cgccaataat
    18661 ctgcccggca ttaatattga gcaggatgac ataaccttgc agtccatatg acaccaacgc
    18721 taaatattga ccgtccgggc taataccctc aacggaataa acgctcctgc tacaccattg
    18781 cgtcataatg ctggtttgtt gatcccctat gcttatacgt gaaatcccct gactatcggc
    18841 aaaaataacc tcgccgtttt caggtcgaaa acgcatcgcc gatatcgttc cacgcgcatc
    18901 acctgcggga aagtcttctt tctgatgcgt gatggtattg atccgcacga tgttacctct
    18961 gccttctccc ggaaccagta atgttctttc atccggggaa agtgccataa cccaggcgcc
    19021 tggtttaccg ctcgtccccg tcccgtcgta tttctccagc gggatatccg ccacatgctg
    19081 ataagccacc agatcaatgg ctgacacact attactggtg cgattcatca cccaggcttt
    19141 tgtgccatca cgcgagagga taagactgtc aggatgtgca ccggtggtaa tcgactgaat
    19201 aatctcccct gtcgccacgt taatgaccga taacgcattc gcttcaaatg aagtcgcata
    19261 aatcaacttt tcatccgggc ttaatgccag cgatctgacg ccctgatctt tacagccacc
    19321 acaatgtttg actgactttt ctttcgctat gggcgctgta aaggtatgca ggattttctt
    19381 ttgtccgagg tcgaaaacaa caatgctgtt cgtgttttca attgcggcat acaacatatt
    19441 accatcccga ctgatcgcca tatcatggat atcggcaatc tcagcgagca aatcaccact
    19501 ggcctgttca cgacttaccg gagcggataa tgtttccctg agggcgttgc gttcctccgc
    19561 taactgctgc tttttttgcc gtcgctcttg ttcaatctcc tgtggataaa acgcttcacg
    19621 caggctttgc ctgacttgta aaactgactc atccatctgc tgctgcgcaa gccagatagc
    19681 cccggtcaga agaagactgc ccgcaacaat aatcccgcct tccgtaacga gtcggttttg
    19741 cccagataaa cgcgcgctca gccaacccaa cgcgccaccc gcaatcaggc cgccaatgtg
    19801 acaagcatta tctattcctg tttgccgggc accatacaac agtgtcagcg ccaccatacc
    19861 caacagagaa aatactcgcc tctggttttt atggtatgtg cccgcacctg aagcaaactg
    19921 tgttgctatc gctgcaccag ctattcccag aatcgccccg gatgccccaa cgctgatgac
    19981 tatctgctca ctttcgcgta acgcataaca ggcgctgatg agcccaccaa agacgccgga
    20041 gaataaccag gtaatcagga gtcgccattt ccccagaatc tgttccgcca cgcctcccac
    20101 gaccaggaat gcaaacatat tcatcagcag atgagaaaca ctactgtgca gaaagatact
    20161 gctcaataag cgccagggtt cacccgacaa agtaagaggc gcaacgtttg cgccgagatg
    20221 gataagtgcg gattgatcga cctcttcata actcatccat tgtgcgagat aacaaaatat
    20281 cccaatacag agtgcaaaaa ggataagggt tattgcgggt aattgaacat ttaacggctt
    20341 aaccgaagat gcagacataa ggtgtttctt ccttgaaaag acaggtaaaa agcatttttc
    20401 ccgtgtgcag ttatcatccc ggcaaacgtc ccatgccgaa aagataattc tgtccgaaat
    20461 atgacttttt cagcctaaaa ttacaatcgt aattaattcg cccctaagta ttttttggca
    20521 tgtaagttgc tttatttact gtgtaagcga tgaaatcagc cgcgacgcaa ccaggttgca
    20581 ccaccacaaa tcagcggtag caccaaaaag gtgcggttta agaattttgc ttcggaatgg
    20641 tgcggcgcat ctcgcaaaaa caaacaataa aacagcaata tctttacatt tagccaaact
    20701 aaatgttacc taacaggcac aacactgcac aataaagttg cagacgataa caacacaaac
    20761 actcacaacg ggtatccatg cgttcttaac gcagaagata aaggagttgg atatgcaatt
    20821 acgtaaacct gccacagcaa tcctcgccct ggcgctttcc gcaggactgg cacaggcaga
    20881 tgacgccgcc ccggcagcag gcagtacgct ggacaaaatc gccaaaaacg gtgtgattgt
    20941 cgtcggtcac cgtgaatctt cagtaccttt ctcttattac gacaatcagc aaaaagtggt
    21001 gggttactcg caggattact ccaacgccat tgttgaagca gtgaaaaaga aactcaacaa
    21061 accggacttg caggtaaaac tgattccgat tacctcacaa aaccgtattc cactgctgca
    21121 aaacggcact ttcgattttg aatgtggttc taccaccaac aacgtcgaac gccaaaaaca
    21181 ggcggctttc tctgatacta ttttcgtggt cggtacgcgc ctgctgacca aaaagggcgg
    21241 cgatatcaaa gattttgccg acctgaaaga caaagccgta gtcgtcactt ccggcactac
    21301 ctctgaagtt ttgctcaaca aactgaatga agagcaaaaa atgaatatgc gcatcatcag
    21361 cgccaaagat cacggtgact ctttccgcac cctggaaagc ggtcgtgccg ttgcctttat
    21421 gatggatgat gccctgctgg ccggtgaacg tgcgaaagcg aagaaaccag acaactggga
    21481 aatcgtcggc aagccgcagt ctcaggaagc ctacggttgc atgttgcgta aagacgatcc
    21541 gcagttcaaa aagctgatgg atgacaccat cgctcaggtg cagacctccg gtgaagcgga
    21601 aaaatggttt gataaatggt tcaaaaatcc aattccgccg aaaaacctga acatgaattt
    21661 cgaactgtca gacgaaatga aagcactgtt caaagaaccg aatgacaagg cactgaacta
    21721 attacaagaa ccaggggcgg aaattccagc cctctcgatt gttacgtagc acggacagac
    21781 tatacgcctg atggtcgttc cccatcgggc ctgaaaaccg caatacgctg ggtaacaatc
    21841 ttcgagggta gcagttaacg ctgctaccct cttttttctg gagtagattt atgtctatag
    21901 actggaactg gggtattttt ttacaacaag ccccgttcgg caacaccacc tatcttggtt
    21961 ggatctggag tggttttcag gtgacgatcg ctttgtcgat ctgcgcctgg attatcgctt
    22021 tcctcgtcgg ttcatttttc ggcattttac gtaccgttcc aaaccgtttt ctctccggtc
    22081 tgggtacgtt gtatgtcgaa ctgttccgca acgtgccgtt gattgtgcaa ttctttacct
    22141 ggtatctggt gatcccggag ttgctgccag agaaaatcgg tatgtggttt aaggccgagc
    22201 tggatcccaa tattcagttt ttcctttcat ccatgctctg cctggggctg tttaccgccg
    22261 cccgtgtttg cgaacaggta cgcgccgcca ttcagtcgtt gccgcgtggg caaaaaaatg
    22321 ccgcgctggc gatgggcctg acgctaccgc aggcttatcg atacgtactg ctgcctaatg
    22381 cttatcgcgt tatcgtcccg ccgatgactt ccgagatgat gaacctggtg aaaaactccg
    22441 ccatcgcctc gactattggt ctggtggata tggcggcgca ggcgggtaaa ttgcttgatt
    22501 actcagccca cgcctgggag tcgtttaccg ctattacgct ggcgtatgtg ttgattaacg
    22561 cggttatcat gctggtaatg acgctggttg aacgtaaagt tcgcctgcct ggcaacatgg
    22621 ggggcaaata atgtacgagt ttgactggag ttccattgtc ccttccctgc catatctgct
    22681 cgacgggctg gtgatcacgc tgaaaatcac cgtcacggca gtcgtgattg gtattttgtg
    22741 gggcaccatg ctggcggtga tgcgcttgtc cagctttgcg cccgtagcgt ggtttgccaa
    22801 agcctacgtt aacgtattcc gctcgattcc tttagttatg gttttgctgt ggttttacct
    22861 gatcgtgcca ggttttctgc aaaacgtgct gggattatca ccaaaaaatg atatccgttt
    22921 aatttcggcg atggtggcgt tttcaatgtt tgaagcggcc tactattcag agattatccg
    22981 tgctggtatt caaagtattt ctcgtggtca gtcgagcgcc gcgctggcgt tgggaatgac
    23041 tcactggcag tcgatgaaac tgattattct gccgcaggcg ttccgcgcga tggtgccgct
    23101 tctgctcact cagggcatcg tactgttcca ggatacctca ctggtgtatg tgttatctct
    23161 ggccgatttc ttccgtaccg cctcaaccat tggtgagcgt gatggtacgc aggttgagat
    23221 gatcctattt gccggatttg tttatttcgt tattagtctt agcgcgtcgt tgttggtcag
    23281 ctacttgaaa agaaggacag cataatgatt accctgaaaa atgtttcaaa atggtatggt
    23341 cactttcagg tgctgaccga ctgctcaacc gaagtgaaaa aaggcgaagt ggtggtggtt
    23401 tgcggcccgt ctggttccgg caaatcaacg ctgattaaaa ccgtcaacgg cctcgaacca
    23461 gtgcagcaag gtgaaatcac cgtcgatggt atcgtggtta atgacaagaa aaccgatctg
    23521 gcaaagctgc gttcccgcgt cgggatggtg ttccagcatt ttgagttgtt cccccatttg
    23581 tcgattattg aaaacctgac tctggcgcag gtgaaagtgc ttaaacgcga taaagcgccc
    23641 gctcgtgaaa aagcattgaa attgctggag cgcgtgggac tttccgcaca tgccaataaa
    23701 tttccggcgc agctttccgg cggtcagcag cagcgtgtgg caatcgctcg cgcgttgtgt
    23761 atggatccta ttgcgatgct gttcgacgaa ccgacatcgg cgctggatcc ggagatgatc
    23821 aacgaagtgc tggacgtgat ggtggaactg gcgaacgaag gaatgaccat gatggtggtg
    23881 acccacgaaa tgggctttgc ccgcaaagtg gcgaatcggg tgatctttat ggacgagggt
    23941 aaaattgtcg aagactcgcc gaaagacgct ttcttcgatg atccgaaatc ggaccgcgcg
    24001 aaagacttcc tcgcgaaaat cctgcattaa tcactctggc gcgcctaccc aagtgcgcgc
    24061 catctcacgc tttatcgttt cgcccctcgt atctgttaca tcctggcgtt acccttgtcg
    24121 caaagaagca cacaacaagg agcaacaatg gcactgccaa ttctgttaga ttgcgaccca
    24181 ggtcatgacg acgctatcgc aatagttctc gccctcgcct caccagagct tgatgtcaaa
    24241 gcaattacgt cttccgccgg aaaccagaca ctagaaaaaa ccttacgcaa tgttctgcgt
    24301 atgctgacct tgcttaatcg caccgatatt ccggtagcag gcggcgcggt aaaaccgtta
    24361 atgcgtgagt tgattatcgc ggacaatgtg cacggcgaaa gcggtctgga tggcccggca
    24421 ttaccggaac cgacgttcgc accgcaaaac tgtacggcgg tagagctgat ggcgaaaacg
    24481 ctgcgcgaaa gtgcggaacc tgtcacgatt gtgtctaccg gaccgcaaac taacgttgcc
    24541 ttgctgctca atagccatcc ggaactgcat agcaaaattg cccgtatcgt gattatgggc
    24601 ggcgcaatgg ggcttggtaa ctggacgcct gcggctgaat ttaatattta cgttgacccg
    24661 gaagcggcag aaattgtctt ccagtcaggg atcccagtgg tgatggccgg tctggatgtt
    24721 actcacaaag cacaaatcca cgttgaagac accgagcgtt tccgcgcgat tggcaaccct
    24781 gtttcaacca ttgttgccga actgctggat ttcttcctcg aatatcataa agacgaaaaa
    24841 tggggctttg tcggtgcacc gctgcatgac ccatgcacca tcgcctggct gttgaaaccc
    24901 gagttgttta ccactgttga gcgctgggtt ggcgtggaaa cacaggggaa atatagccag
    24961 ggtatgacgg ttgttgatta ttattatctg actggcaata aaccgaatgc cactgtaatg
    25021 gtcgatgttg atcgtcaggg ctttgttgat ttactggctg atcgtctgaa attttacgct
    25081 taacacacgt cattgattaa gatcaccacg cgttacctgg gtggtcttaa tctgtttatc
    25141 tctttttctt tcaagatata aatgcaatgg ataatgcaga actcgccatt ggtatcgatc
    25201 tcggcactac caatagttta attgccgtct ggaaagacgg tgccgcgcaa ttaattccaa
    25261 ataagttcgg tgaatattta acaccatcca taattagcat ggatgaaaat aatcatattt
    25321 tagtcggaaa accggctgta tcacggcgta cttcgcatcc ggataaaacg gcagcgttat
    25381 ttaaacgtgc aatgggcagt aataccaact ggcggttagg cagcgacaca tttaacgcgc
    25441 cagaactgtc ctctttggta ttacgctcat taaaagaaga tgccgaagaa tttctgcaac
    25501 gtccgattaa agatgtggtg atctccgttc cggcttattt cagcgatgaa caacgcaagc
    25561 atacccgttt agcagcggag ttagccgggt taaatgcggt acgcttaatt aatgaaccca
    25621 cagcagctgc gatggtgtat ggcctgcata cccaacaaaa tacccgttcg ctggtgtttg
    25681 atctcggtgg cggcacgttt gacgttacgg tgcttgagta cgccacgccg gtgattgaag
    25741 ttcacgcctc cgctggcgac aactttcttg gtggcgaaga ttttacccat atgctggtcg
    25801 atgaggtttt aaaacgcgcg gatgtcgcca ggaccacgct taacgagagt gaactggcag
    25861 ccttgtacgc ctgtgtggaa gcggcaaaat gtagcaatca atcgccattg cacattcgct
    25921 ggcagtacca ggatgaaacg cgggagtgcg aattttacga gaacgaactg gaagatttgt
    25981 ggttgccgct gctcaatcgc ttgcgagtgc cgattgaaca ggcgttgcgc gatgcacgtc
    26041 tgaagccgag tcaaatcgac agtctggtgc tggttggcgg cgcgtcacaa atgccgctgg
    26101 tgcagcgaat cgccgtgcgt ctgtttggca aattaccgta tcaaagttac gatccgagca
    26161 ccattgtcgc gctgggcgca gcaatccagg ccgcctgccg cttacgcagt gaagatattg
    26221 aagaggtaat cctcactgat atttgccctt actcgttggg cgttgaagtt aaccgccagg
    26281 gcgtttccgg cattttctcg ccgattattg aacgaaacac cactgtgccc gtgtcgcgtg
    26341 tagaaactta ttcaaccatg cacccggaac aggattcaat tacggttaac gtctatcagg
    26401 gagaaaacca caaagttaaa aacaacattc tggtggaatc cttcgatgtg ccgttgaaga
    26461 aaaccggggc ttatcagtcg attgatattc gctttagtta tgatatcaac gggttgcttg
    26521 aagttgacgt gcttctggaa gacggcagcg ttaagtccag agtgattaac cacagcccgg
    26581 taacattgag cgcgcagcag attgaagaga gtcggacgcg gttatccgca ttgaaaattt
    26641 atccgcgcga tatgctcatc aatcgcacct ttaaagccaa actggaagag ttgtgggcgc
    26701 gggcgctggg tgacgagcga gaagagattg gccgggtgat caccgatttt gatgcggcgc
    26761 tgcagtcaaa cgatatggcc cgcgtcgatg aggtcaggcg gcgggcgagc gtttatttag
    26821 ccattgagac ctcataatca cggctgccgg atgcggcgta aatgctgcat ccggcatcgg
    26881 cgcaaaaaac acatcgtcaa ctaaacaaca tcgcgatttt gccgagagca taacctataa
    26941 ccagcaccgt taaactgatt ttgataatgc tggtaatgct ctgtggtttt tcaccctcat
    27001 catttttttc ttcatggttt tcaggtgttg gctcatcgac atcttcatcc tccggctcga
    27061 gttttacttt cgtcaacagc atccgggtga taatggcctc taatggatga gcatctccgc
    27121 cttccagcct tgtattaaga cgggccagca tctcttgttt cggaaacgct tcaagtacta
    27181 cctgttccgc tacccgatac aaatccagta acggtgaatc ttcttctgtc tcgctaccga
    27241 ctctcgattt ccaccacgcc catgctttgc gtttgaagaa taacgactca ataaacgatt
    27301 gacctaacgg cgataatttt ccgctatgta aaatttccgc ccataacagc cgcgtccggg
    27361 cgctctcacc aggaacatat ttcagcggta gaccttgcgc atctaccatg ctccgcgctt
    27421 cgataaccat cactaataac gcgaaataat ccgggcaatg actcttgctc cactgcaaca
    27481 acaaattatc agcttgtgta gatgggtaac tttcccggta cgcgcagaga tcggcaagca
    27541 ggctttcccc ctcgccgcag tacaaccttt gagcacacaa gtaatatcgg gcatcttcgc
    27601 tttctggttc ttccatttgc cactgtttgg ctacaggaat gagttccgcc atacctgttt
    27661 gcaccgagct gtaccagcgc aacagtttgc gatgtaactt tgcatcatca ggaatgaacc
    27721 acggaccttc catcgccaaa aacgcagtga cgtagtcagg atggtaacgg cagcaacgtt
    27781 ccagcgcgaa gtaatactca acagtctggt tctgcaacgc aacgggatat tccagaaggc
    27841 taaggaaatc gaaacaatca ccagcctgaa tggcctcaag aaaagcctcc ctttcttcct
    27901 catccattcc ttcgctgtca ttaaacgaat gccagttcaa acgctctgcc agcaaagaag
    27961 cacaatttaa tgaaagatat cgcgcttcta tagcgattgc acacagcggc cagcgtaatt
    28021 gatcgacatc ctccatgttc caggtattta attgctgaat aaatttctgc caggcggagg
    28081 gctgaaaacg atcactttct gaatccagta atgtcctgaa tgcacgcagt atttcatgtt
    28141 cagcggcggc atctttttct tcatcatctg cttcctcgac aggatttacc gccagtcgca
    28201 gcgcctcttc ataggcctgg cgtaatgctt taaacccctg cggatcggtt tcgggatgac
    28261 ataacggtaa gcgagcaaga taagcctggc ggataatgtc tatttgcgtc gtgctttcaa
    28321 tttcgaggat ttgccaacat gttttcatag gtcgctcaca tccttaagcg ttaccgggca
    28381 ttcaggctgg acagttaatg gctgccaggg aagcgtggca tagaaacgat cgcttcccgc
    28441 tgccagctct tcgaacatcc gactcccggc gctatcgtat ttgtacaggg ttagcgcctc
    28501 gcgtagcgaa gtgttgtctt cgcactgaga agattgccag tagagacgtc ctaacgaata
    28561 ggcggaaaaa tagtgcatcc agctgtgata gtaatggtga gctcgtacat agacgcgcga
    28621 ttgcagccat aaactctctt cttccgtcag ccagttgttg agcacaccga cccgtgacag
    28681 aaaccccatt cgaacataat cccaggcttt gattccccct tctccacagc acatagcggt
    28741 ttgggcaacg aattgggtat aaatcaaccc tctctccgag ccaccagcaa ttaatgcttt
    28801 ccactcttca ggggaagagc gatgccatgt cagatataag ccagctaaat cattggcatg
    28861 accatcatca gtcatctgat aaatagtctg aattaaatca tcacgattat ttattcccca
    28921 ggatgatgag agatcgaatt cttttatacc ggtatacatt tttggcgagt catgcgcggg
    28981 tttgcaaccc tgattaagta tttccatggg cgcagaaagc gcaaaaagaa gatattgttc
    29041 ttccttattc atttgttaat aatcccttaa gtgcattaac t
//
LOCUS       DAPGWB010000047        28903 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.047, whole genome shotgun sequence.
ACCESSION   DAPGWB010000047 DAPGWB010000000
VERSION     DAPGWB010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 28903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28903
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.047"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            785..1657
                     /locus_tag="RHX79_001985"
     CDS             785..1657
                     /locus_tag="RHX79_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase family protein"
                     /protein_id="HDV2197159.1"
                     /translation="MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGK
                     SGAGKSSLCNALFQGEVTPVSDVHAGTREVRRFRLSGHGHSMVITDLPGVGESRDRDA
                     EYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC
                     HEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALP
                     DHAASPLMTRLQDELRTESVRSQAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDS
                     VVSVARAVWNWIFF"
     gene            2028..5147
                     /gene="ag43"
                     /locus_tag="RHX79_001986"
     CDS             2028..5147
                     /gene="ag43"
                     /locus_tag="RHX79_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Ag43"
                     /protein_id="HDV2197160.1"
                     /translation="MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAA
                     VTSVPALAADTVVQAGETVNDGTLENHDNQIVFGTANGMTISTGLEYGPDNEANTGGQ
                     WIQNGGTANNTTVTGGGLQRVNAGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE
                     DGIATGTVINEKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINK
                     NGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQ
                     IVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVV
                     EGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSG
                     AAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAG
                     TTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLT
                     QKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIP
                     DNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNA
                     DRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQVVEAINGATTEEGAFVQGNKLQ
                     AGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVSGE
                     NNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYG
                     AAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSD
                     NNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGS
                     AQHVRAGFRLGSHNDMNFGKGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGD
                     MSMGTAAAGSNMTFSPSQNGTSLDLQAGLEARVRENITLGVQAGYVHSVSGSSAEGYN
                     GQATLNVTF"
     gene            5268..7784
                     /locus_tag="RHX79_001987"
     CDS             5268..7784
                     /locus_tag="RHX79_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708766.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197161.1"
                     /translation="MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPA
                     LLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTT
                     ALAGGLLAVPLQIKNIQQNGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYD
                     ISPSLMWWGGLLYWLAALVTLLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQ
                     NDYSLPDSLTERIWLTLISQRISRGELREFELADGNWLLNNAWYERNMAGFNEQLKEN
                     LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICA
                     SCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDATANGLILMKL
                     PETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEI
                     QTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGKVP
                     GVTDPAEASRLIRRGHLTYTQARNITRFGTIESVTYDIAEGSVVSLAAGGISFALTAS
                     VFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTTQQLHRLSVVQGMLKHIDFSTASPT
                     VRLALQKGTGAGNISALNKVMKGTLVTSLALVAVTTGPDMIKMLRGRISGAQFIRNLA
                     VASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVLGGMIASAVSGKIAGALVEED
                     RVKILAMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQNALEIIFAAGIQQRAATNM
                     LIKPLVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA"
     gene            7860..8315
                     /locus_tag="RHX79_001988"
     CDS             7860..8315
                     /locus_tag="RHX79_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197162.1"
                     /translation="MIHLFKTCMITAFILGLTWSAPLRAQDQRYISIRNTDTIWLPGN
                     ICAYQFRLDNGGNDEGFGPLTITLQLKDKYGQTLVTRKMETEAFGDSNATRTTDAFLE
                     TECVENVATTEIIKATEESNGHRVSLPLSVFNPQDYHPLLITVSGKNVN"
     gene            8394..8627
                     /locus_tag="RHX79_001989"
     CDS             8394..8627
                     /locus_tag="RHX79_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001119724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF905 family protein"
                     /protein_id="HDV2197163.1"
                     /translation="MPGYTEYVLAEGSFSYGQAVAVITAYRNVFIQDDPGMHFRRVIR
                     NAEGQRRWRCRNSEPDAGKVLNTRLASDGLLRQ"
     gene            8727..9545
                     /locus_tag="RHX79_001990"
     CDS             8727..9545
                     /locus_tag="RHX79_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 domain-containing protein"
                     /protein_id="HDV2197164.1"
                     /translation="MRLASRFGYANQIRRDRPLTHEELMHYVPGIFGEDKHTSRSQNY
                     TYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYTKHMLRLRRAGEINGEHVPEIIL
                     LNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
                     RIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWS
                     AYQTIQENMLKGGISGRSAKGKRIHTRAIHSIDTDIKLNRALWVMAETLLESLR"
     gene            9600..10085
                     /locus_tag="RHX79_001991"
     CDS             9600..10085
                     /locus_tag="RHX79_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirestriction protein"
                     /protein_id="HDV2197165.1"
                     /translation="MKTISHNSTTSSVSVTAASGNDQPQLVATIVPDEQRISFWPQHF
                     GLIPQWVTLEPRIFGWMDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDNDDETWVLFNA
                     MNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRII
                     D"
     gene            10101..10577
                     /locus_tag="RHX79_001992"
     CDS             10101..10577
                     /locus_tag="RHX79_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RadC family protein"
                     /protein_id="HDV2197166.1"
                     /translation="MQQLSFLPGEMTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAR
                     EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA
                     VVLAHNHPSGEVTPSKADRLITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL"
     gene            10640..10861
                     /locus_tag="RHX79_001993"
     CDS             10640..10861
                     /locus_tag="RHX79_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF987 domain-containing protein"
                     /protein_id="HDV2197167.1"
                     /translation="MKIITRGEAMRIHQQHPASRLFPFCTGKYRWHGSTEAYTGREVQ
                     DIPGVLAVFAERHKDSFGPYVRLMSVTLN"
     gene            11024..11392
                     /gene="cbtA"
                     /locus_tag="RHX79_001994"
     CDS             11024..11392
                     /gene="cbtA"
                     /locus_tag="RHX79_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system toxin CbtA"
                     /protein_id="HDV2197168.1"
                     /translation="MSDALSGTMLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYL
                     ADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCKAD
                     TLGSGGYVYLAVYPTPETKK"
     gene            11482..11856
                     /locus_tag="RHX79_001995"
     CDS             11482..11856
                     /locus_tag="RHX79_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin"
                     /protein_id="HDV2197169.1"
                     /translation="MKTLPDTHVREASSCPSPVTIWQTLLSRLLGQHYGLTLNDTPFA
                     DERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSTCPRSQLINSIDILRARRATG
                     LMTRDNYRTVNNITLGKHPEKR"
     gene            11853..12065
                     /locus_tag="RHX79_001996"
                     /pseudo
     CDS             11853..12065
                     /locus_tag="RHX79_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708774.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            12054..12206
                     /locus_tag="RHX79_001997"
                     /pseudo
     CDS             12054..12206
                     /locus_tag="RHX79_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290248.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
     gene            complement(12487..13023)
                     /gene="yghD"
                     /locus_tag="RHX79_001998"
     CDS             complement(12487..13023)
                     /gene="yghD"
                     /locus_tag="RHX79_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GspM family type II secretion system protein
                     YghD"
                     /protein_id="HDV2197170.1"
                     /translation="MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAV
                     VFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMNTRLRSAAPDIMAARKSATTTPAQV
                     SRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS
                     AAEKTGMVNVQRLEFGRG"
     gene            complement(13025..14203)
                     /gene="gspL"
                     /locus_tag="RHX79_001999"
     CDS             complement(13025..14203)
                     /gene="gspL"
                     /locus_tag="RHX79_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000097227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspL"
                     /protein_id="HDV2197171.1"
                     /translation="MSSILEIFFPLCAADPIHWQRRTPDVEHGIWSDVANEQLQQWLQ
                     TDAIRLYIPGEWISVWQVELPDVARKQIPTILPALLEEELNQDIDELHFAPLKIDQQL
                     ATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMAGDAQRVICRIDECRGWS
                     AGLALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAVTTYGEP
                     EGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQA
                     EEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEM
                     RGFTFDQKRQTLHLQLRAANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVTLRRK
                     "
     gene            complement(14200..15177)
                     /gene="gspK"
                     /locus_tag="RHX79_002000"
     CDS             complement(14200..15177)
                     /gene="gspK"
                     /locus_tag="RHX79_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001554494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspK"
                     /protein_id="HDV2197172.1"
                     /translation="MITSPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQ
                     EYQQALWYSASAESLALSALSLSLKNEKRVHLEQPWASGPRFFPLPQGQIAVTLRDAQ
                     ACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRL
                     GREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININ
                     TLDVTQSVILEALFDPWLSPVQARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQL
                     KTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGESE"
     gene            complement(15180..15779)
                     /gene="gspJ"
                     /locus_tag="RHX79_002001"
     CDS             complement(15180..15779)
                     /gene="gspJ"
                     /locus_tag="RHX79_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspJ"
                     /protein_id="HDV2197173.1"
                     /translation="MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGH
                     DQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASESEGMRFVRGGV
                     VNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG
                     TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQ"
     gene            complement(15776..16147)
                     /gene="gspI"
                     /locus_tag="RHX79_002002"
     CDS             complement(15776..16147)
                     /gene="gspI"
                     /locus_tag="RHX79_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspI"
                     /protein_id="HDV2197174.1"
                     /translation="MKRGFTLLEVMLALAIFALAATAVLQIASGALSNQQILEEKTVA
                     GWVAENQTALLYLMTREQRAVRQQGESDMAGSRWYWRTTPLSTGNALLQAVDIEVSLH
                     EDFSSVIQSRRAWFSAVGGQQ"
     gene            complement(16144..16707)
                     /gene="gspH"
                     /locus_tag="RHX79_002003"
     CDS             complement(16144..16707)
                     /gene="gspH"
                     /locus_tag="RHX79_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001394829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspH"
                     /protein_id="HDV2197175.1"
                     /translation="MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSESPAKKAAQDF
                     LTRFAQFKDRAVIEGKTLGVLIDPPGYQFMQRRQGQWSPVSSTRLSAQVTVPKQVQML
                     LQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS
                     AAQNACWAVKLAHDGALSLNQCDERMP"
     gene            complement(16711..17166)
                     /gene="gspG"
                     /locus_tag="RHX79_002004"
     CDS             complement(16711..17166)
                     /gene="gspG"
                     /locus_tag="RHX79_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003912123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HDV2197176.1"
                     /translation="MNSLSRTQKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKA
                     DRQKAISDIVALENALDMYRLDNGRYPTTEQGLEALIQQPANMADSRNYRTGGYIKRL
                     PKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ"
     gene            complement(17183..18406)
                     /gene="gspF"
                     /locus_tag="RHX79_002005"
     CDS             complement(17183..18406)
                     /gene="gspF"
                     /locus_tag="RHX79_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001173399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system inner membrane protein
                     GspF"
                     /protein_id="HDV2197177.1"
                     /translation="MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEA
                     RMNTSSGGMLQRRRHAHRRVAAADLALFTRQLATLVQAAMPLETCLQAVSEQSEKLHV
                     KSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ
                     RQRLKSRLLQAMLYPLVLLVVATGVVTILLTAVVPKIIEQFDHLGHSLPASTRTLIAM
                     SDALQASGVYWLAGLLALLVLGQRLLKNPTMRLRWDKTVLRLPVTGRVARGLNTARFS
                     RTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGSSLRAALAELRLFPP
                     MMLYMIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVI
                     AILEPMLQLNNMVGM"
     gene            complement(18406..19899)
                     /gene="gspE"
                     /locus_tag="RHX79_002006"
     CDS             complement(18406..19899)
                     /gene="gspE"
                     /locus_tag="RHX79_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system ATPase GspE"
                     /protein_id="HDV2197178.1"
                     /translation="MVPVAQETTANTVRLPYSFSRRFSLVAWCEASLEILHVHPLSLS
                     VLQELQRGLNAPFTLRQIDEAEFEQRLNAVWQRDSSEARQLMEDLGSAEDFFTLAEEL
                     PETEDLLESDDNAPIIKLINAMLAEAIKEGASDIHIETFEKSLVIRFRVDGTLHEMLR
                     PGRKLASLLVSRIKVMARLDIAEKRVPQDGRIALLLGGRAIDVRVSTMPSAWGERVVL
                     RLLDKNQARLTLERLGLSQQLTAQLRQLLHKPHGIFLVTGPTGSGKSTTLYAGLQELN
                     NHSRNILTVEDPIEYMIEGIGQTQVNTRVGMTFARGLRAILRQDPDVVMVGEIRDTET
                     AEIAVQASLTGHLVLSTLHTNTAVGAITRLQDMGVEPFLLSSSLTGVMAQRLVRTLCP
                     DCRQPAPATDEEKRLLGITDARTVTLYHPQGCPACNHKGFRGRTAIHELIVVDATLRD
                     LIHRQAGELELERYVRQHSAGIRSNGIEKVLAGETSLDEVLRVTMEA"
     gene            complement(19899..21959)
                     /gene="gspD"
                     /locus_tag="RHX79_002007"
     CDS             complement(19899..21959)
                     /gene="gspD"
                     /locus_tag="RHX79_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020234996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
                     /protein_id="HDV2197179.1"
                     /translation="MFWRDITLSVWRKKTTGLKTKKRLLPLVLAAALCSSPVWAEEAT
                     FTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNLLEA
                     QGYAVVPMENDVLKVVKSSAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELAP
                     ILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQRVDHAGNRTEEVIPLDNA
                     SASEIARVLESLTKNSGENQPATLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDS
                     EMERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEEAEGTVGSGREVVSIAASKHS
                     NALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAEGSNINFGVQWASKDAGLM
                     QFANGTQIPIGTLGAAISQAKPQKGSTVISENGATTINPDTNGDLSTLAQLLSGFSGT
                     AVGVVKGDWMALVQAVKNDSSSNVLSTPSITTLDNQEAFFMVGQDVPVLTGSTVGSNN
                     SNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEGQTSLDVVFGERKLKTTV
                     LANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADKKEKRNLMVFIRPTI
                     LRDGMAADGVSQRKYNYMRAEQIYRDEQGLSLMPHTAQPVLPAQNQALPPEVRAFLNA
                     GRTR"
     gene            complement(21989..22948)
                     /gene="gspC"
                     /locus_tag="RHX79_002008"
     CDS             complement(21989..22948)
                     /gene="gspC"
                     /locus_tag="RHX79_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspC"
                     /protein_id="HDV2197180.1"
                     /translation="MARVVFRDARIYLIQWLTKIRHTLNQRQSFNTDKEHLRKIVRGM
                     FWLMLLIISAKVAHSLWRYFSFSAEYTAVSPSANKPPRADAKTFDKNDVQLISQQNWF
                     GKYQPVATPVKQPEPVPVAETRLNVVLRGIAFGARPGAVIEEGGKQQVYLQGETLGSH
                     NAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSDEAKQAVAEPAASAPV
                     EIPTAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAVKPGADRSLFDASGFKEGDIAIA
                     LNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALR"
     gene            complement(22966..23376)
                     /gene="gspS2"
                     /locus_tag="RHX79_002009"
     CDS             complement(22966..23376)
                     /gene="gspS2"
                     /locus_tag="RHX79_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system pilot lipoprotein
                     GspS-beta"
                     /protein_id="HDV2197181.1"
                     /translation="MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAKNIS
                     QNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLM
                     ITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA"
     gene            complement(23442..24251)
                     /gene="pppA"
                     /locus_tag="RHX79_002010"
     CDS             complement(23442..24251)
                     /gene="pppA"
                     /locus_tag="RHX79_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase PppA"
                     /protein_id="HDV2197182.1"
                     /translation="MLFDVFQQYPVAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMA
                     EFHGEMPSAQSKISLALPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRY
                     PLVELLTALAFLLASLVWPESGWALAVMILSAWLIAASIIDLDHQWLPDVFTQGVLWT
                     GLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGSW
                     VGPLSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATIYLQALF"
     gene            complement(24391..>28903)
                     /gene="sslE"
                     /locus_tag="RHX79_002011"
     CDS             complement(24391..>28903)
                     /gene="sslE"
                     /locus_tag="RHX79_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipoprotein metalloprotease SslE"
                     /protein_id="HDV2197183.1"
                     /translation="TLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEP
                     TPEPEPTPEPTPDPEPTPEPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTP
                     GDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDAQELAGSDNKKSNALSLVT
                     SMNSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPS
                     THTSPVVPATTPGTKPDLNASFVSANAEQFYQYQPSEIILSEGRLVDSQGDGVVGVNY
                     YTNSGRGVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQ
                     LIHRYSKAGQNHTRVVPDEVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNLPNEF
                     IEQFKTGQAKEIDTAICAKNDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSV
                     SKFHVFHDSTNFYGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNEL
                     AYITEAPSLVEPENVTRDTATFNLPFISLGQVGDGKLMVIGNPHYNSILRCPNGYSWN
                     GGVNKDGQCTLNSDPDDMKNFMENVLRYLSNDRWLPDAKSSMTVGTNLETVYFKKHGQ
                     VLGNSAPFAFHKDFTGITVKPMTSYGNLNPDEVPLLILNGFEYVTQWGSDPYSIPLRA
                     DTSKPKLTQQDVTDLIAYMNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNK
                     SVVNNDPQGYPDRVRQRRSTPIWVYERYPAVDGKPPYTIDDTTKEVIWKYQQENKPDD
                     KPKLEVASWQEEVEGKQVTQFAFIDEADHKTPESLAAAKQRILDAFPGLEVCKDSDYH
                     YEVNCLEYRPGTDVPVTGGMYVPQYTQLDLSADTAKAMLQAADLGTNIQRLYQHELYF
                     RTNGRQGERLNSVDLERLYQNMSVWLWNETKYRYEEGKEDELGFKTFTEFLNCYTNNA
                     YVGTQCSAELKKSLIDNKMIYGEESSKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNI
                     KVDVEKYPGVVNTNGETVTQNINLYSAPTKWFAGNMQSTGLWAPAQQEVSIESKATVP
                     VTVTVALADDLTGREKHEVSLNRPPRVTKTYDLKANDKVTFKVPYGGLIYIKGDSKEV
                     QSADFTFTGVVKAPFYKDGKWQHDLNSPAPLGELESASFVYTTPKKNLNASNYTGGLE
                     QFANDLDTFASSMNDFYGRDSEDGKHRMFTYKNLPGHKHRFANDVQISIGDAHSGYPV
                     MNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLG
                     KMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPDGTP
                     LPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKNYCAESNGNAADTLMLCASWV
                     AQTDLSEFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNTLASLNLPKPKQGPETINK
                     VTEYSMPAE"
BASE COUNT         6649 a         8041 c         7471 g         6742 t
ORIGIN      
        1 cttccctgct gacacagata aaatgcacca ttttttcttc aaatacttct gtataatcgc
       61 cagccaatga tgagaatgga ttaaaataac acttcttcga caaacacaaa aacagccttc
      121 attttacatc atcatccagt ttcagttaac cccggacgag cgacagtgtt tcagtacagg
      181 aattaaaagc cagcttttgc tcagtaaaaa cacactcaac taataatatc tcagcagata
      241 ttatcctgac caggacacct cacattactg atttctcttc cgacagtatc actgcacaaa
      301 taaaaaagaa cgggataaat attcagaccg gaagaatggt gtcacaaaag catttaatca
      361 ttacgaatga ccaggaaggg aaacacttaa ccacatggta tcaacagata tcattacgtg
      421 tgcactctta taaaaaacac acagaagaag taagataatt ataaacgtaa atttaatatc
      481 tcccactgac atctccccca caatacacta aaaaatactc acagcagtaa acacagacac
      541 acctgataat catacagccg ataaatattt tcccctttac ggagaaatca gcctgctgtt
      601 taacaataac ggcgtatttt catggaagga gatcacccag taacggataa gtcctgatct
      661 ccttcatgtt aatacgcaac aatcccatcg attcaaaaca atttcagaca gatattatct
      721 ccgtgaatcc cccgccacct ttccggtgcg cggggttttg tcttttttca ccgggaatac
      781 atgtatgaat ccgtctgatg ccattgaggc aattgaaaaa ccgctctcct ccctgcctta
      841 ctcactttcc cgtcacatcc tggaacatct gcgcaaactc accagtcacg aacccgtgat
      901 tggcattatg ggtaaaagcg gggccggtaa atcctcactc tgtaatgcac tgtttcaggg
      961 ggaggtcacc ccggtcagtg atgttcacgc cggcacccgg gaagtgcggc gcttccgtct
     1021 gagtggccac ggtcacagca tggttatcac tgacctgccc ggggtgggcg agagccggga
     1081 cagggatgca gagtatgaag ccctgtaccg tgacattctg cctgaacttg acctggtgct
     1141 gtggctgatt aaagccgatg accgcgccct gtctgtggat gagtatttct ggcgacacat
     1201 cctgcaccgg ggacatcagc aggtgctgtt tgtggtgacg caggccgaca aaacggagcc
     1261 ctgccatgaa tgggatatgg ccggtattca gccttctccc gcacaggcac agaatattcg
     1321 cgaaaaaacg gaggcggtat tccgtctgtt ccggcccgta catccggttg tggccgtatc
     1381 ggcccgcacc ggctgggaac tggatacgct ggtcagtgcg ctcatgacag cgcttcccga
     1441 ccatgccgcc agtcccctga tgacccgcct gcaggacgag ctgcgcacgg aatctgtccg
     1501 gtctcaggcc cgtgaacagt ttaccggtgc ggtggaccgg atatttgaca cggcggagag
     1561 cgtctgtatt gcctctgttg cacgcacggt tctgcgtgcc gtccgtgact cggtggtctc
     1621 tgttgcccgc gctgtatgga actggatttt cttctgaaca ctctgccagg ggaaatgcct
     1681 gattacattg cgttaaccaa ctgaaaacat gccccccccc ctcataccca cctctttctc
     1741 ttgcgtgact tccctgccgc taatagaata aaacgatcga taaaacaggt atcgatcgtt
     1801 actatcgatc gtttatagtg gttaatggtc tgcgaaaagg cagttgaatc tcttcatcat
     1861 gcagaacgga attgcacaca acggactgat gcttctctgg cggatgagag aggggaaaca
     1921 tttatgtccg ggaaaaacca ctttatctga ccatgctgtt ttgtacctgc cggtacccac
     1981 atctgtgggt accggctttt ttattcaccc tctgtaagga aaagctgatg aaacgacatc
     2041 tgaacaccag ctacaggctg gtatggaatc acattacggg caccctggtg gtggcctccg
     2101 aactggcccg ctcacgggga aaacgcgccg gtgtggcggt tgcgctgtct cttgctgctg
     2161 tcacatcagt cccggcactg gctgctgaca cggttgtaca ggcgggagaa accgtgaacg
     2221 acggaacact ggaaaatcat gacaaccaga ttgtcttcgg tacggccaac ggaatgacca
     2281 tcagtaccgg gctggagtat gggccggata acgaggccaa taccggcggc caatggatac
     2341 aaaatggcgg taccgccaac aacactactg tcaccggtgg tggtcttcag agagtgaatg
     2401 ccggaggaag cgtttcagac acggttatca gtgccggagg cggacagagc cttcaggggc
     2461 aggcagtgaa caccactctg aacggcggtg agcagtgggt acatgaagac gggattgcaa
     2521 cgggtaccgt cattaatgag aagggctggc aggccatcaa atccggcgca gtggcaaccg
     2581 acacggttgt gaataccggc gcggaagggg gaccggatgc ggaaaatggt gataccgggc
     2641 agaccgtcta cggagatgcc gtacgcacca ccatcaataa aaatggtcgt cagattgtgg
     2701 ctgctgaagg aacggcaaat accactgtgg tttatgccgg cggcgaccag actgtacatg
     2761 gtcacgcact ggataccacg ctgaatgggg ggtaccagta tgtgcacaac ggcggtacgg
     2821 cgtctggcac tgttgtaaac agtgacggct ggcagattgt caaaaacggg ggtgtggccg
     2881 ggaataccac cgttaatcag aagggcagac tgcaggtgga cgccggtggt acagccacga
     2941 atgtcaccct gaagcagggc ggcgcactgg ttaccagtac ggctgcaacc gttaccggca
     3001 taaaccgcct gggagcattc tctgttgtgg agggtaaagc tgataatgtc gtactggaaa
     3061 atggcggacg cctggatgtg ctgaccggac acacagccac taatacccgc gtggatgatg
     3121 gcggaacgct ggatgtccgc aacggtggca ccgccaccac cgtatccatg ggaaatggcg
     3181 gtgtactgct ggccgattcc ggtgccgctg tcagtggtac ccggagcgac ggaaaggcat
     3241 tcagtatcgg aggcggtcag gcggatgccc tgatgctgga aaaaggcagt tcattcacgc
     3301 tgaacgccgg tgatacggcc acggatacca cggtaaatgg cggactgttc accgccaggg
     3361 gcggcacact ggcgggcacc accacgctga ataacggcgc catacttacc ctttccggga
     3421 agacggtgaa caacgatacc ctgaccatcc gtgaaggcga tgcactcctg cagggaggct
     3481 ctctcaccgg taacggcagc gtggaaaaat caggaagtgg cacactcact gtcagcaaca
     3541 ccacactcac ccagaaagcc gtcaacctga atgaaggcac gctgacgctg aacgacagta
     3601 ccgtcaccac ggatgtcatt gctcagcgcg gtacagccct gaagctgacc ggcagcactg
     3661 tgctgaacgg tgccattgac cccacgaatg tcactctcgc ctctggtgcc acctggaata
     3721 ttcccgataa cgccacggtg cagtcggtgg tggatgacct cagccatgcc ggacagattc
     3781 atttcacctc cacccgcaca gggaagttcg taccggcaac cctgaaagtg aaaaacctga
     3841 acggacagaa tggcaccatc agcctgcgtg tacgcccgga tatggcacag aacaatgctg
     3901 acagactggt cattgacggt ggcagggcaa ccggaaaaac catcctgaac ctggtgaacg
     3961 ccggcaacag tgcgtcgggg ctggcgacca gcggtaaggg tattcaggtg gtggaagcca
     4021 ttaacggtgc caccacggag gaaggggcct ttgtccaggg gaataagctg caggccggtg
     4081 cctttaacta ctccctcaac cgggacagtg atgagagctg gtatctgcgc agtgaaaatg
     4141 cttatcgtgc agaagtcccc ctgtatgcct ccatgctgac acaggcaatg gactatgacc
     4201 ggattctggc aggctcccgc agccatcaga ccggtgtaag cggtgaaaat aacagcgtcc
     4261 gtctcagcat tcagggcggt catctcggtc acgataacaa cggcggtatt gcccgtggag
     4321 ccacgccgga aagcagcggc agctatggct tcgtccgtct ggagggtgac ctgctcagaa
     4381 cagaggttgc cggtatgtct gtgaccgcgg gggtatatgg tgctgctggc cattcttccg
     4441 ttgatgttaa ggatgatgac ggctcccgtg ccggcacggt ccgggatgat gccggcagcc
     4501 tgggcggata cctgaatctg atacacaacg cctccggcct gtgggctgac attgtggccc
     4561 agggaacccg ccacagcatg aaagcgtcat cggacaataa cgacttccgc gcccggggct
     4621 ggggctggct gggttcgctg gaaaccggtc tgcccttcag tatcactgac aatctgatgc
     4681 tggagccgca actgcagtac acctggcagg gactctccct ggatgacggc caggataacg
     4741 ccggttatgt gaagttcggg catggcagtg cacaacatgt gcgtgccggc ttccgtctgg
     4801 gcagccacaa cgatatgaac tttggtaaag gcacctcatc ccgtgacacc ctgcgcggca
     4861 gtgccaaaca cagtgtgcgt gaactgccgg tgaactggtg ggtacagcct tctgttatcc
     4921 gcaccttcag ctcccggggg gacatgagca tgggtacagc cgcagccggc agtaacatga
     4981 cgttctcacc gtcacagaat ggtacgtcac tggacctgca ggccggactg gaagcccgtg
     5041 tccgggaaaa tatcaccctg ggcgttcagg caggttatgt ccacagcgtc agcggcagca
     5101 gcgctgaagg ctataacggt caggccacgc tgaatgtgac cttctgacag aaccatcgcc
     5161 tctctgtggt cccggtcatc atgatcggga cccggaccgg cgcaacggat attcaacgcc
     5221 acattcgctg gcattaacaa taacatgata ttcatcacgg agtgactatg ttacagatag
     5281 tcggcgcgct gatcctgctg atcgcaggat ttgccattct tcgccttttg ttcagagcat
     5341 taatcagcac ggcttctgcg ctggcagggc tcatattgct gtgtctgttc ggcccggcct
     5401 tactggctgg ctatatcacc gaacgcataa cccggttgtt ccatattcgc tggctggcag
     5461 gcgtatttct gacgattgcc ggaatgatca tcagcttcat gtggggactt gatggtaaac
     5521 atatcgcgct ggaggctcac acctttgact ctgtgaaatt tattctgacc accgctctcg
     5581 ccggtggtct gctggctgtt cccctgcaga tcaaaaacat tcagcagaac gggatcacac
     5641 cagaagatat cagcaaggaa attaacgggt attactgctg tttttatact gcctttttcc
     5701 ttatggcgtg ttctgcatgc gcaccattga tcgcgttaca gtacgatatt tcaccgtcac
     5761 tgatgtggtg gggcgggttg ttgtactggc tggctgcatt agtgacgctg ctatgggcgg
     5821 ccagccaaat ccaggcgctg aaaaaactga cctgtgccat cagccagaca ctggaagaac
     5881 aaccggtgct caacagtaaa tcgtggctga ccagtttgca aaacgattac agccttcctg
     5941 actcactgac ggagcgcatc tggctgacgc tcatttctca acggatttcc cggggagagc
     6001 tgagggaatt tgaactggca gacggaaact ggttactgaa caatgcctgg tatgaaagaa
     6061 acatggcagg gtttaacgaa cagttgaaag agaacctgtc attcacacct gatgaactga
     6121 aaacgctctt ccggaaccgc ctgaatttat caccggaagc gaatgacgat tttctcgatc
     6181 gttgcctgga cggcggtgac tggtatccct tttcagaagg tcgccgtttt gtatcattcc
     6241 atcacgtgga tgagcttcgt atctgtgcct cctgcgggct gacagaagta catcatgccc
     6301 cggaaaatca taagccggat ccggaatggt actgctcctc tctttgtcgc gaaacagaaa
     6361 cactgtgtca ggaaatttat gaacgccctt acaacagctt tatttccgat gcaacggcga
     6421 atggtctgat tctcatgaaa ctgccggaaa cctggagtac aaatgagaaa atgtttgctt
     6481 ccggagggca gggacatggg tttgccgctg aacggggaaa ccatattgtc gacagagtcc
     6541 gtctgaaaaa cgcacggatc ctcggtgata ataatgccag aaatggagca gacagactgg
     6601 tcagcggaac agaaatccag acgaaatatt gttcaactgc agcccgtagc gtcggtgcgg
     6661 cattcgacgg acaaaacgga cagtatcgtt acatgggaaa taatggcccc atgcaactgg
     6721 aagtcccccg tgatcagtat gccggcgctg ttgaaaccat gaggaataag atccgcgaag
     6781 gtaaagtacc cggtgtaacc gatcccgcag aagcgtcccg gctgattcgt cggggacatc
     6841 tgacttatac tcaggcccgt aatatcaccc ggttcgggac catcgaatcg gtcacttatg
     6901 atattgccga gggttcggtt gtcagtctgg cggccggagg gatcagtttt gccctgacgg
     6961 catcggtctt ctggctcagc accggcgatc gcgatgctgc cctgcagaca gctgctgtcc
     7021 aggcaggaaa aaccttcacc cgcacactgg ctgtctacgt cacaacccag caactccacc
     7081 ggctcagtgt tgttcagggt atgctgaagc acattgattt ttcgactgcc agcccgactg
     7141 tccgactggc tcttcagaag gggaccggtg caggaaatat cagtgccctg aacaaagtaa
     7201 tgaagggtac gctggtgaca tctctggcac tggtagctgt cacaaccggc cctgacatga
     7261 tcaaaatgtt gcggggacgg atctccggtg cgcagttcat caggaatctt gccgtggcat
     7321 cttccggtgt ggcaggtgga gctgtcgggt cagtggcggg cgggatactg ttcagtccac
     7381 tgggaccatt tggtgcactg acagggcgtg tggttggcgg tgttctgggg ggaatgattg
     7441 cctccgctgt atcaggaaaa attgccggag cgctggttga agaagatcgc gtcaaaattc
     7501 tggcaatgat tcaggagcag gtgacatggc ttgccggcag tttcctgctg accggacatg
     7561 agattgaaaa tctgaacgag aatctggccc gtgttatcga tcagaatgct ctggagatca
     7621 ttttcgccgc cggtatacaa caacgggccg cgaccaatat gttaatcaaa ccactggtgg
     7681 tcagtatcat caggcaacgc cccgtcatgg aatatgatgc atcccatctc ggcaatatgg
     7741 ttaaccgact ggaagaagca ttacccccgg agttaccggc ataacggcta ttctgcgcct
     7801 tttacgcttt atcacctgat ttgtcagtgt catcgtcatg actcagagag gtaaatacca
     7861 tgattcacct gttcaaaacc tgcatgatta ccgccttcat tctggggtta acgtggtctg
     7921 ccccactccg ggcacaggat caacgttaca tcagtatacg caatacagat acgatatggc
     7981 tcccgggaaa tatttgtgct taccagttcc ggctggataa tggcggaaac gatgaaggat
     8041 ttggccccct caccatcact ctgcaactca aagacaaata tggtcagacg ctggtgacca
     8101 gaaaaatgga aacggaagct tttggtgaca gtaatgccac gcgaaccaca gacgcatttc
     8161 tggaaacgga gtgcgtggaa aatgtcgcca caaccgaaat cattaaagca actgaagaaa
     8221 gtaacggcca tcgtgtcagt ctgccgttat cggttttcaa tccccaggac taccatccac
     8281 tgctgattac cgtttccgga aaaaacgtta actgatccct gaagtcagtt tcatgcttca
     8341 gcctctgtca caacgcgtgg cagaggcttt ttatttatca ggagaaaaca gatatgccgg
     8401 gttacacaga gtatgtcctg gctgaaggat ctttctcata cgggcaggcg gttgctgtca
     8461 taaccgctta ccgcaatgtg tttatccagg atgacccggg aatgcatttc cgtcgggtta
     8521 tccgcaacgc ggaaggtcag cgacgctggc gctgccggaa ttctgaaccc gatgccggaa
     8581 aggtgcttaa tacgcggctc gccagtgacg gtcttctcag acaataaacg tcattcattt
     8641 cacccatcag gccgcgtctt ctccgggaga cgtggctttt tcatttatta caccagtaaa
     8701 tcttaaccac cgataaggag caaattatgc gactagccag tcgttttggt tatgcgaacc
     8761 agatacgccg tgaccgtccg ctgacacacg aagaactgat gcactatgtg ccggggattt
     8821 tcggggaaga taaacacacg tcccgaagcc agaactatac gtacatcccc accatcaccg
     8881 tactggaaag cctgcagcgg gaaggctttc agccattctt cgcctgccag acccgtgtgc
     8941 gcgacccggg ccgccgggga tacacaaaac acatgctgcg tctgcggcgg gccggagaga
     9001 taaacggaga acatgtccct gaaattattc tgctcaactc tcatgacggt acctccagct
     9061 accagatgct gccgggttac ttcaggttcg tctgccagaa cggatgcgtc tgtggtcagt
     9121 ctctggggga agtgcgtgtt ccgcaccggg gaaatgtggt ggacagagtc attgaagggg
     9181 cttacgaggt ggtgggggtt tttgaccgga ttgaggaaaa gcgtgatgcc atgcagtcgc
     9241 tgattctgcc gccaccggca cgccaggcgc tggcacaggc ggcactgact taccgttatg
     9301 gtgacgaaca tcagcccgtc accaccgccg acattctgac gccacgacgc cgggaggatt
     9361 acggtaagga cctgtggagt gcttatcaga ccattcagga gaatatgctg aaaggcggaa
     9421 tttcaggtcg cagcgctaaa ggaaaacgta tccatacccg tgccattcac agcattgaca
     9481 ctgacattaa gctcaaccgc gcattgtggg tgatggcgga aaccctgctg gagagcctgc
     9541 gctgattcag ccattaccct gaaaaccacg catttatttg tcctttaagg agtcatttca
     9601 tgaaaaccat ttcacataat tccaccacat cttctgtttc cgtaaccgct gcatcaggga
     9661 atgaccagcc tcagctggtt gccaccatag tccctgatga acagcgcatc agcttctggc
     9721 cgcagcactt tggcctcatt ccacagtggg tgaccctgga gccccgtatc ttcggctgga
     9781 tggaccgtct gtgtgaagac tactgcggtg gtatctggaa tctgtacacc ctgaacaacg
     9841 gcggggcatt tatggcaccc gaaccggatg acaatgatga cgaaacatgg gtactgttca
     9901 atgccatgaa cggtaaccgc gctgaaatga gcccggaagc tgccggcatt gctgcctgtc
     9961 tgatgacgta cagtcatcat gcctgtcgta cggagtgtta tgccatgacg gtccattatt
    10021 accggctgcg ggattacgcc ctgcagcatc cggaatgcag cgccattatg cgcatcatcg
    10081 actgaatgga gagaagtaca atgcaacagc tttcctttct gcccggagag atgacgcccg
    10141 gcgagcgcag cctcattcaa cgggccctga aaaccctgga ccgccatctt catgaacccg
    10201 gcgtggcctt cacctccacc cgtgcggcac gggaatggct gattctgaac atggcgggac
    10261 tggagcgtga agaattccgg gtgctgtatc tgaacaacca gaatcagctg attgccggtg
    10321 aaaccctctt caccggcacc atcaaccgca cggaagtcca tccccgtgaa gtgattaaac
    10381 gcgccctgta tcacaatgcc gctgccgtgg tgctggcaca caatcacccg tccggtgaag
    10441 tcacacccag taaggcagac cggcttatca ccgaacgtct ggtacaggca ctggccctgg
    10501 tggatatccg ggtgccggac catctgatag tcggtggcaa ccaggttttc tcctttgccg
    10561 aacatggtct gctttaaccc gtcacaacca catcacgctt gttttcactt ttatcttctg
    10621 tcttcagagg tatcacacta tgaaaatcat cacccgtggt gaagccatgc gtattcacca
    10681 acaacatccg gcatcccgtc tttttccttt ctgtaccggc aaataccgct ggcacggcag
    10741 cactgaagcg tataccggtc gtgaagtgca ggatattccc ggtgtgctgg ccgtgtttgc
    10801 tgaacgccat aaggacagtt ttggcccgta tgtccggctg atgagcgtca ccctgaactg
    10861 atgttccgtc acccggaaaa cgagtacgac tggctgagct cagacgccgc tgtggatgag
    10921 gccctgctca taaacgaata cacctttacc gaaagcggtc tgcgcgccgg ctgacctgtc
    10981 atcgttaaac cattcttaac cgattttctg tgaggatttt atcgtgtcag acgcactctc
    11041 cgggacaatg cttcccgacg acaatcacga ccgcccctgg tgggggctgc cctgcaccgt
    11101 gacgccctgt ttcggggcac gtctggtgca ggagggtaac cgcctgcatt accttgccga
    11161 ccgcgccggt atcagaggcc tgttcagcga tgcagatgcg taccacctgg accaggcctt
    11221 tccgctgctg atgaaacaac tggaactcat gctcaccagc ggtgaactga atccccgcca
    11281 tcagcatacc gtcacgctgt atgcaaaagg tctgacctgc aaagctgaca ctctcggtag
    11341 cggtggttac gtttatctgg ctgtttatcc gacgcccgaa acgaaaaagt aaaccaccgg
    11401 aataaccttc tgctccggcc tggtgctttc accacgccac ttttccattt ttcatctctg
    11461 catatcagga aaaccttcag tatgaaaaca ttacccgata cacacgtacg ggaggcatcg
    11521 agctgcccgt ctcccgtcac catctggcag actctgctct cccgactact gggccagcat
    11581 tacggcctta cactgaatga cacaccgttc gccgatgaac gtgtgattga gcagcatatt
    11641 gaagctggca tttcactgtg tgatgcggtg aattttctcg tggaaaaata cgcgctggtg
    11701 cgtaccgacc agccgggatt cagcacttgt ccccgctctc agttaataaa cagtattgat
    11761 atcctccggg ctcgccgggc gaccggcctg atgacccgcg acaattacag aacggtaaat
    11821 aacattaccc tgggtaagca tccggagaaa cgatgaaact ttccctgatg ctggaagccg
    11881 acagaattaa tgtgcaggca ctgaacatgg ggcaaattgt cgttgacgtc gatggtgtta
    11941 atctcactga actgattaac aaggtcgctg aaaacggtta ttcactccgc gtggtggagg
    12001 aatccgacca acagtcaacc tgcacactac caccgtttgc aacccttgcc ggcatacgct
    12061 gcagtaaagg acgctatgaa gatgagatgt tcatcattaa atactttaag aagggatctg
    12121 cacacatcac tttcaaaagg ctggagctga ttgacagaat taacgatata atagccaggc
    12181 actttccttc tgtgctctca gcctgacccc gagtttgatt ccctttcgat atcaaaaggg
    12241 actgcgggta caaaagaggg tacatatttc accaaaccaa acaaaataaa ctaatatcaa
    12301 catgatagaa gcattcttcg attccgagtc cggcaccact aattcttaag aacccgccca
    12361 caaggcgggt ttttgctttt ggatctgaca ataaccttca cgaaaaaagt ttgcttataa
    12421 agtctggggg aattactctc gccacgttaa cgagagtaat tttattgata ctaatctcct
    12481 gatactttac ccccgtccaa actccagccg ctgcacattc accatcccag tcttctcagc
    12541 agcactggca tcaatttgtg tcacccgcag cgcatacttt tcatccagcg cgtttaacca
    12601 gttcagcagg tcattaaaca ccaccggatc tatccagacc tgaatattct ccccacgctc
    12661 ggctatccgc ttgatgacta ccgagtgcgc ggaagcgctg tcactgataa cccgcgatac
    12721 ctgcgcaggc gttgttgtgg cggattttcg cgccgccata atatccggcg cggcgctcct
    12781 cagtctggtg ttcatcgcca ccagttgctg caacattgtc tcctgttgtt ctatccgttc
    12841 gctcaacggc tgccagatga ggacgtaata tccgacgcta aacaggaaca ccaccgctgc
    12901 cagtaacatg cccttttcac gcggagaacg ccccgccagg tgttgtgcca gccagtgttc
    12961 gccacggctt aactggcgtt cacgccattg ctgaaaatag tgaataaatt tatcgcgtaa
    13021 catgttattt cctccgcaac gttacgccgc cggaaaccgc atcaccctct ttctgtaatg
    13081 cgtcctgttg cacaacataa tcggttgcca gtgcactacg cagtttgtcg aaactggcaa
    13141 agttagcagc ccgcaactgg aggtgaagcg tctggcgttt ttgatcaaag gtgaaaccac
    13201 gcatttcgat gtcggaaagt gacgctgatt tcagggtgct ggctatcgct gacaactcgg
    13261 cgagcagccg ggtatcgtcg gcctgtgggc gatatttttt cagcgccatc gtcacctgag
    13321 agcgtaaatt cacaatccgc ttctgctccg ggaacaacgt taagaactgt tcctccgcct
    13381 gggtgcggct ttgcgccacc tgttcgctga cgctccataa cgtcacgccc cgctccactg
    13441 ccagcgcaac cagaatcagc aatatcggca gaatcatcac ccgccagcgc gcccactgtt
    13501 ttcggtagct gacgcgaggc tgccacggcc ctgtcagcag gttcccttcc ggttcgccat
    13561 aagtggtaac ggcgggcaga gctgtaacgg tcaggcgttc agcgtctgcg ccagcccatg
    13621 ctgatagctt ttccggtgca atgccgacta cggttagcga aagcggtaaa tcctgctcat
    13681 tgagctgggc gcggaacatg accggagcca gcgccagccc ggcgctccat ccccggcatt
    13741 catcgatgcg gcagataacc cgttgcgcat cgccagccat aaacccacaa ggaatggaca
    13801 tccagtccgg cgcgacggta gcgcgggtga tgccgttttc ctgcaaccac tgcgcaatgt
    13861 tgcgcatatg ctgttggtga atcactgcta cggttgccag ttgctggtcg attttcaacg
    13921 gggcgaaatg cagttcatcg atatcctggt tcagctcttc ttccagcaag gcgggcagaa
    13981 tagtcggtat ctgcttgcgg gcgacatcag gcagttcaac ctgccagacg ctgatccatt
    14041 cgccgggaat gtagagtcga atcgcatcag tttgcagcca ttgctggagc tgttcgttag
    14101 caacgtcaga ccagataccg tgctccacat cgggtgtacg gcgctgccaa tggatgggat
    14161 cagcggcgca aagcgggaaa aaaatctcaa ggatggaact cactcacttt ctcctgtctg
    14221 atgccagaga accgaaaagt gttgtgggcc catgcggaca attaacgagt tcatcgtcag
    14281 ttcaatctca ttcacggtga tatctgaacg cagccagaag taattgctgt ccacgctcag
    14341 gacggttttt agctgttttt tagtacgctc atcgacgtca gcaagtagcg gctgtgcaag
    14401 aaactgatcg acatcttccc agcccttcgc cggacgttgt tgtaataacg cccgcgcctg
    14461 aacagggctt aaccacgggt caaacagcgc ctcaagaatc acactttgcg tgacgtctaa
    14521 agtattgatg ttgatttgct ggcgggtcat cggcagcgca cagaccagcg gtttcagttt
    14581 ttgataaagc ccggcgtcca ttccctgcac cacgcgcatc tcactgatat cagccagcgg
    14641 ttgattcgcg gcgtagaaag gcaccgaacg ggcgagatac tcgctgtctt cacggcccag
    14701 acgtgtctgc acgctgcggt cctcgtcaat aaactcccac aggctttcgg ctatcagttc
    14761 ggcccgataa gcaggcacat ccaggcgcga gatcagggca atcaactgtt gtaccgcaag
    14821 cggacgcgac gccgttgtcg gctgagcaag ggcattcagg ttaaagcaag cctgtgcgtc
    14881 acgcagggtg accgcaattt gcccctgcgg cagagggaag aaacgagggc cggatgccca
    14941 cggctgttcc agatgcacgc gcttttcatt tttcaggctc agactgagcg cgctcagcgc
    15001 caggctttct gcactggcgc tgtaccacag cgcctgctgg tactcctgct ggctgcgcgt
    15061 tcttcccagt tgctgctgca tccgcccgga aagcgtgatg gttaccagca tcataactgc
    15121 cagcaatacc agcaccacga ccagtgccat tccgcgtttt ggtggtgagg tgatcatgat
    15181 tattgcggcc cgcgtaacaa ccagatgcgt tcaatctcgc cccattgcgg cgaatgcagg
    15241 gtcatgcgta ccgccacagg gatcgcctgt actgacgacc agctctcctg ccagcgcgtg
    15301 ccgtcgtaga actgcaaacg gagcgaatcg gccggaatca acttttgcat tgtcggcttc
    15361 acgctgcctg cggcatcggt cagcggccag gctaaccgtt cgagataacc gtcatgaatg
    15421 cggtaaccga cggtgagcag attactgcgc ggcagacgca tcaacgggtt aaccacaccg
    15481 ccgcgcacaa aacgcattcc ttcactctca gacgccagca cgccagcgcc agccagtaac
    15541 gctggttcac gctggccctg atcgcctctt accggacgcg gcatcatttg ggtcagatcg
    15601 tgggtcagaa aactcatcgt ttgctgcatg aggtttagtt tttgatcgtg tccggcgacg
    15661 gcgctattca cgcgcgtgac gccgttagtc acctgctgcg ccatcagtgc cagcgaggca
    15721 aaaatggcaa ttgccaccaa catttccagt aacgtgaaac cagcgcgagt ccttctcact
    15781 gttggcctcc cacggcgcta aaccaggcgc gtcgtgactg aatcaccgac gaaaagtctt
    15841 cgtgaaggct gacttcaata tccaccgcct ggagcagcgc gttgcctgta ctcagcggtg
    15901 tggttcgcca gtaccagcgg cttcctgcca tatcgctctc gccctgctgc ctgaccgccc
    15961 gctgctcgcg ggtcatcagg tagagcagcg cggtctggtt ttcagccacc cagcccgcta
    16021 ccgttttttc ctcaagaatt tgctgattac tcagcgcacc gctggcaatc tgtaacaccg
    16081 ccgtggcagc cagcgcaaaa atcgccagcg cgagcatcac ttccagcaag gtaaatccgc
    16141 gcttcatggc atcctctcat cacattgatt gagggataac gcgccatcgt gcgccagttt
    16201 taccgcccaa catgcgtttt gcgccgccga gtagaagcgc agcgtaaacg gcgtggcggg
    16261 ttcaaaaggc gaaaaacgga tctgcggcgt cttctttttc gcctcttttt gcagctccag
    16321 ttcaatatcg tgcagcgtca ggcgacgacg ttgcagctcc agcgcatact ccttctgcca
    16381 gatatcactt ccgggttgta acagcatctg cacctgtttt ggcaccgtaa cctgtgccga
    16441 taaccgggtc gaggaaacgg gcgaccactg cccctgacga cgctgcataa actggtagcc
    16501 aggcgggtcg attagcacac cgagtgtttt cccttcgatc actgccctgt ccttaaactg
    16561 cgcaaagcga gtcagaaaat cctgcgccgc ttttttcgcg ggcgattcag aatcggtcgc
    16621 aaaagtctgt accacgcccg cactggcaag gccgataaga aaaatcacca gcatgatttc
    16681 cagaagtgtg aatccgcgtt caggcactgc ttactgaaac tcctgcaaat tccagttacc
    16741 gatatctgcg ccagcgcctt ccccgttttc ctgaccatcc gcccccaggg tataaacatc
    16801 aaacagccct ttttcacccg gactgagata ctgataatca ttgccccacg gatcctttgg
    16861 cagtcgttta atgtatccac cagtacggta gttgcgggag tccgccatat tggctggctg
    16921 ctggatcagc gcctcaagcc cctgttctgt ggtcggataa cgcccgttat ccagtcggta
    16981 catatccagt gcgttttcca gcgccacgat atcgctgatg gctttttgcc gatcggcttt
    17041 ctctttgttg cccaacaggt taggcaccac cagacttgcc aggacgccaa gaataacaat
    17101 caccaccatc acttccagca gggtaaaacc tgcccgtggt ttttgtgtgc gggataacga
    17161 attcatgtga taactccgta aattacattc caaccatatt attcagttgc agcatcggct
    17221 cgaggatggc gatgacaata aacagcacca cgcccgccat catcaccacc agcgcaggct
    17281 caaacagccc caacgccagc cccacctggg tatcaaattc ccgttcctgg ttaacagcgg
    17341 cctgctcaag catggtttcc agttcgccgc tctgttcgcc ggaggcgatc atgtacagca
    17401 tcatcggggg gaacaggcgc aactccgcca gcgcggcgcg cagactgctt ccttcgcgga
    17461 cgcgatctgc cgccagcagt agttgttgtt cgacatagcg atttgccgac acagcggcag
    17521 cggtctgaat accttccagt agcggaacac tgctggcggt gaggatgctt aaggtgcggg
    17581 aaaaacgcgc cgtattcagc ccgcgcgcaa cacgccctgt cacgggcaga cgcagcacgg
    17641 ttttatccca gcgcaggcgc atagtaggat ttttaagtag ccgttgcccc agcaccagaa
    17701 gcgccagcaa tcccgccagc cagtaaacgc cgctggcctg taacgcgtcg ctcatggcaa
    17761 taagcgtgcg ggttgaggcg ggtagcgagt gtccgagatg atcaaactgt tcgatgattt
    17821 tcggcaccac tgccgtcagc aaaatagtga ctacgcccgt tgccaccacc agcagaacca
    17881 gcggatagag catggcctgc aatagacgtg atttcaggcg ctgtcgctgt tcggtgtaat
    17941 ctgccaggcg attaagcacc acgtcgagat gcccggattt ttctccggca gcaaccatcg
    18001 aacaaaacag agaatcaaag acgcggggat gttcgcgcag gctgtccgac agggtgtaac
    18061 cttcctgaat ccggctgcgc agcgccattc cgaggctttt tacatgcagt ttttcacttt
    18121 gctcactgac cgcctgtaag caggtttcca gcggcattgc tgcctgtacc agcgttgcca
    18181 gttggcgcgt gaacagcgca agatctgccg ccgccacgcg acgatgtgcg tgccgccgac
    18241 gctgcaacat cccccctgac gaagtattca tccgggcttc aatatgcacg gggataagct
    18301 ctttaccgcg caacaactgg cgggcatgac gcgcggaatc cgcctcaatc atacctttgg
    18361 ttttgcgacc attacgctcc agcgcctgat agtaaaacag tgccattacg cctccatggt
    18421 tacccgcaga acttcatcga gagaggtttc tccggcgagc actttctcaa tgccgttgct
    18481 gcggataccc gcagagtgtt gtcggacata acgttccagc tccagctccc cggcctgacg
    18541 gtggatcaaa tcacgcaatg tggcatccac cacgatcagc tcatggatgg cagtccgtcc
    18601 gcgaaaacct ttgtgattac aggcgggaca gccctgtgga tggtacagag tgacggtacg
    18661 ggcgtcggta attcccagca ggcgtttttc ttcgtcagtg gctggtgcgg gctggcggca
    18721 gtcgggacac agcgtgcgaa ccagtcgctg cgccatcacg cccgtcagac tggaagagag
    18781 caggaaaggc tccacgccca tatcctgcaa acgcgtgatc gcccccaccg ccgtgttggt
    18841 atgcagcgtg gaaaggacca ggtgtccggt aagcgatgcc tgaacagcga tttctgcggt
    18901 ttcggtatcg cggatttcac cgaccatcac cacatccggg tcctgacgca aaatcgcgcg
    18961 caggccacgg gcgaaggtca tgccgacgcg ggtgttaacc tgtgtctgac cgatcccttc
    19021 aatcatgtat tcgatggggt cttcaaccgt gagaatgtta cgcgaatggt tgttcagctc
    19081 ctgcaatccg gcgtacagcg tggtgctttt gccggaaccc gtcggccccg tcaccagaaa
    19141 gatgccgtgc ggtttgtgta acagctggcg caactgcgcg gtcagttgct ggctaagccc
    19201 cagacgctcc agcgtcaggc gggcctggtt tttgtccagc agtcgcagca ccacgcgctc
    19261 gccccaggca gaaggcatgg tggagacacg cacgtcaatc gcccgaccgc ccagcagcag
    19321 cgcaatacgt ccatcctgcg gcacgcgctt ttcggcgata tccagccgtg ccatcacctt
    19381 gatacgcgat accagcagcg aggccagttt gcgccccggg cgcagcattt catgtaatgt
    19441 gccgtcaacg cgaaaacgga tcaccagact cttttcaaac gtctcgatgt ggatatccga
    19501 agcgccttct ttaatcgcct ctgccagcat ggcgttgatc agtttgatga tcggcgcatt
    19561 gtcgtcgctt tccagcagat cttccgtttc cggcagttct tccgcgaggg taaaaaagtc
    19621 ctcggcagaa ccgagatctt ccatcagctg gcgagcctcg gaagagtccc gctgccagac
    19681 cgcattcagc cgctgttcaa attcggcctc gtcgatttgc cgcagcgtaa agggcgcgtt
    19741 cagcccccgc tgcagctcct gcaaaacaga gagcgatagc ggatgaacgt ggaggatctc
    19801 cagcgacgct tcgcaccatg ccaccaggct aaaccgacgg ctgaaactgt agggcagacg
    19861 cacggtgttg gcggtggttt cctgtgctac aggcaccatt aacgcgttct cccggcattg
    19921 aggaacgcgc gaacttccgg cggtaaggcc tggttttgcg ctggcagtac cggctgtgca
    19981 gtgtgcggca tcaggcttaa accttgctca tcacgataga tctgttcggc gcgcatatag
    20041 ttatatttgc gctgcgacac gccgtctgcc gccataccgt cacgcagaat ggtcggacgg
    20101 ataaacacca tcaggttacg tttttctttt ttatccgccg tcgatttaaa caggttacca
    20161 atcaatggga tatcgcccag cagcggcact ttcgccacgc tttctcccgc ctgatcgtcc
    20221 atcagaccac caagcacaat cagctcacca tcgttagcca gcacggtggt tttcagtttg
    20281 cgctcaccaa acaccacgtc gaggctggtc tgtccttcca ccttcgagac ttcctgctca
    20341 atcaccatct gtaccgcgtt accttcgtta atctgcggcg tgactttcag catgatgccg
    20401 acttttttcc tttctactgt attgaaagga ttgctgttat tggagccaac ggtagagccg
    20461 gttaataccg gaacgtcctg gcccaccatg aagaaggctt cctggttgtc cagcgtggtg
    20521 atgctcggcg tggagagcac gttcgagctg gagtcgtttt taaccgcctg caccagcgcc
    20581 atccagtcgc ctttcaccac gccaaccgcc gtaccgctga atccagaaag aagctgggcg
    20641 agtgtggaga gatcgccgtt ggtatccgga ttaatggtgg tagcgccgtt ttcactgatc
    20701 accgtggagc ctttctgcgg tttcgcctga gaaatggctg cccccagcgt gccaataggg
    20761 atctgcgtac cgttagcaaa ctgcattaat ccggcatctt tcgacgccca ctgcacgccg
    20821 aaattgatat tgctaccttc ggcaacttcc acgatcaacg cctcgacgtg cacctgagca
    20881 cggcgaatat ccagttgttc aatcacgctt tgcagcgact gcatgatgtc ctgcggcgca
    20941 gtaacaatca gggcattact gtgtttgctg gcggcgatgg agacaacctc acgcccgcta
    21001 ccgaccgtgc cttccgcctc ttctttagcc gccgtgagcg tgccgctgac ctgcttcagc
    21061 acatcgacca gatcttcggc tttgctgtat ttgagataga aaacctggct gttgccgctg
    21121 cgttccattt ctgagtccag ccgacggatc aggcggcgca ttttgtcccg cgtggccggg
    21181 tcaccactga caatcacact gttggtgcgt tcgtcggcga caatttgaga tttcagcgtc
    21241 gcaggctggt tctcgccgct gtttttcgtc aggctttcca gcacgcgggc gatttccgaa
    21301 gccgaggcgt tatccagcgg gatcacctct tcagtgcgat tacccgcgtg atccacacgc
    21361 tggatcactt ccgtcagccg ctccacaacg gaggcgcgtc cggtgagcat aatcacgttg
    21421 gagggatcgt aattaacaac gttgcctgag cctgcgctgt cgatcatctg gcgcagaatc
    21481 ggtgccagct cgcgtaccga cacattacgt accggcacta ctttggtgac catttcatcg
    21541 cccgcgtagt tgtcgctgcc ttcaccgacc agcggcagcg gctcgacttt cgcagcgctg
    21601 gatttcacca ccttcagcac gtcgttttcc atcggtacga cggcataccc ctgtgcttcc
    21661 aacaggttaa ggaatagctg gtaatactgg cgttcattga gcggggtcat ggtgcgaata
    21721 ctcactttcc cctgtacgcc cggccccata atgatggttt tattaaggtt agcgccgacg
    21781 gtttcgatga acgatttcag gtcggtatct ttaaaattag cggtgaaagt ggcttcttcc
    21841 gcccagaccg gtgaactgca taatgccgct gccagcacca gcggcagtaa acgctttttt
    21901 gttttgaggc cagttgtctt cttacgccag accgacaacg taatatcacg ccaaaacacg
    21961 atgaatgatt ctcctggatt aaatgcggtt agcgcagcgc gatggaaatg tcgtggcgcg
    22021 cacccttgcg taaaaccgta agttgaatgg aatccattga aggtaactgc cgcatcagag
    22081 caatcattgc tcgtggatca gtgaaatcct gctgatttag cgcaatggcg atatcgcctt
    22141 ccttgaaacc gctggcatcg aacagagaac gatctgcccc cggcttcact gcataaccga
    22201 caatcccctc cttacgcaca ggcgtaagct ggatatagtt aaaaattttc tgcggatctt
    22261 tcgccagtgc ctgacgcacg gcagtcggga tctcaactgg cgcactggca gcaggctcag
    22321 caacagcttg ctttgcttcg tcactgacag cttttttgtt ggtcacggca acagtggaac
    22381 gctcctcttc agccaggctc aggcgctcta tttttccctg atagcgcagc atcacatggt
    22441 cgcgattgat ttcctcaatc accgcattgt gcgagccaag cgtttcaccc tgcaaataga
    22501 cctgctgttt accgccttct tcaataaccg cgccgggtct ggcaccaaag gcaatcccgc
    22561 gcagcaccac attaagacgc gtttctgcca caggcacagg ttcgggttgt tttaccggcg
    22621 tggcgacggg ctgatatttg ccaaaccagt tttgctggct gattaattgc acgtcatttt
    22681 tatcgaacgt ttttgcatcc gcacggggcg gtttattcgc cgatggggaa acagccgtat
    22741 attccgcaga aaaggagaaa tagcgccaga gtgaatgcgc cacttttgca gaaataataa
    22801 gcagcatcag ccagaacatc ccgcgtacaa tttttcgcag atgctctttg tctgtattaa
    22861 aagattgtct ctggttaaga gtgtgacgaa tttttgtcag ccattgaatg agataaattc
    22921 gtgcgtcacg aaaaacaacc cgcgccaatt tatatctacc cgacgttatg ctttgactat
    22981 tccacaggtg gtacgatcca gtttccgctg atactggtta cctgtacgtg tatcattaat
    23041 cgttatgctg taattaattc cctcggtaat cattaatttc accgttgggt cagcgcacat
    23101 ttgtcgttga tagctggtta aaaaggcgtc aggcgtctgc gtggtctgag tccccgcttc
    23161 gctgataatg gtcattttta ccgtcgtgcc gctactttgt gccagcacta aggtatatcc
    23221 cgcagattta atcggcaggt tttggctgat atttttcgcc tgttttttcg ccagtaaact
    23281 ggcattttca ttatggctgg cacagccact taataatcct gtaacgctca acaatagcga
    23341 tattaatacc ctccctggca tttgttttat cgacatggta aataatctct aaggttatta
    23401 ataagagtta aaatgtcact ttgataatga cgttgttatc attaaaacaa tgcctgtaga
    23461 taaattgttg ctataccgcc cagacttaaa cacggtccaa aaggcagtgt ggttgatcct
    23521 ctttttgtaa taacggcata tatcaggccg cagcatgagg cgattaaagc aacattgggt
    23581 agcgacaacg gccccaccca actacctaac gcagcgaaca ataatacatc gcccatgcct
    23641 aatgcttctt tacgcagaac tattccggct atccagcgca gagagtaaaa agtgataaac
    23701 cccaccagga cgccggtgac tgcatcttgt agcgtgagcg ggctctgctg cgcccatgcc
    23761 gcaattagtc ccgtccacaa tacgccctga gtaaaaacat cgggcagcca ttggtgatcg
    23821 aggtcgatga tgctcgcggc aatcagccag gcggataata tcatcaccgc cagcgcccat
    23881 ccactttccg gccagaccag actcgccagc aaaaaagcga gtgccgtcaa taactccacc
    23941 agcggataac gcttgctgat tttcgcctga cagtcgcggc agcgcccttt gagcatcaac
    24001 caggagagca gcggaatatt gtcacgaacg cggatagtct gctgacaatg tgggcagtgc
    24061 gaacgcggta gcgcaaggct tatttttgac tgcgcactcg gcatttcacc atgaaactcc
    24121 gccatttgtt ggcgcagcat gatggggtaa cgccaaatca ccacattcaa aaaactgccg
    24181 atgatcaatc ctccgacggt agccagtatg ggcatcgcca cggggtattg ctgaaaaaca
    24241 tcaaaaagca tggttaaagg ttgtttgttg taacttgccg gatgcgggcc tgcaggtgta
    24301 tgccatatgg ctttcctcca ggcccgataa gctggcgcaa cccggtgcgc cttatttcat
    24361 gccggatgcg gcgtgaacgc cttatccggg ttattcagca ggcatcgaat actcggtaac
    24421 cttgttaatg gtttccggcc cttgcttcgg tttcggcaga ttgagtgacg ccagcgtgtt
    24481 gtacgccgac tggctcacac cgccttcgaa gctcatctcc gtcgctcccg gcaactggta
    24541 agcattcgcg cccggattcc atttcttaaa gaactccgaa agatccgtct gggcgaccca
    24601 ggaggcacac agcatcagcg tgtccgctgc gttaccgttg gattcagcac agtaattctt
    24661 gccgccaaac ttgtcattgc tgacctcatc gccgcgtgct ttacgatgca tcaactggaa
    24721 caggttccag cctttcatcc cttcacgctc gctgtaaaac tctggcagag gagtgccatc
    24781 tggataccat ttcttgatat caaagttttt ctctgcccat tccttcagct gtgcgtacat
    24841 cagcagacgg tcacccgcac cgccgcgcgc ccatgcctga ccgttgcttt cctccagata
    24901 ttccggtgcg acggtaatat cgtcagcgac acggttcatc ttgccgagat aacgatcctg
    24961 catgtacagc gccagcacgt tgttagcgac ttcagttgca cccggtacag tcaacggcgt
    25021 ttctgcggcg ttatgaccga cttcatgcca gatcagccag tcgttcagcg gcgtcgtcgg
    25081 cagcgtggtg ctgttcggcg agaagctgct gttcattacc ggataacccg aatgcgcatc
    25141 accgatggag atctgcacat cgttggcgaa acgatgtttg tggcccggca agtttttata
    25201 ggtaaacatc cggtgcttac cgtcttcgct atcacggccg tagaagtcat tcatcgagct
    25261 ggcaaaggta tccagatcgt tagcgaattg ctccagtccg ccagtgtaat tgctggcatt
    25321 caggttcttc ttcggtgtgg tatagacgaa cgaggcagac tccagttcgc ccagcggggc
    25381 aggggagttc agatcgtgtt gccacttacc gtctttatag aacggcgctt ttactacacc
    25441 ggtaaaggtg aagtcagctg attgcacctc tttgctgtcg cccttgatgt aaatcagacc
    25501 accgtaaggg actttgaacg tcaccttatc attggctttc aggtcatagg tttttgtcac
    25561 tctgggtgga cgattcaggc taacttcatg cttctctcgt cctgtcaggt cgtcggccag
    25621 cgcaacagtc acggtcacag gaactgtcgc ctttgactca atgctgactt cctgctgggc
    25681 aggtgcccac aggccagttg actgcatgtt acctgcaaac catttggttg gagctgagta
    25741 caagttaatg ttttgtgtga cggtttcgcc gtttgtattc accactcccg gatacttctc
    25801 aacatcaact ttgatgttca gatcccacca ggaacggccc agcatcaggc gtgtcagcgg
    25861 tttttccata tagttgagcg ggtagctcgg gttcatcatg cccgctttgc tgctttcttc
    25921 accataaatc atcttgttat cgatcagcga ttttttcagc tcagcagaac actgcgtgcc
    25981 aacgtatgca ttgttggtgt agcagttcag aaactcagtg aacgttttaa agcccagctc
    26041 gtcttcttta ccctcttcat aacgatattt cgtctcgttc cacagccaga cggacatgtt
    26101 ttggtataaa cgttccagat caacgctgtt gagacgctca ccctggcggc cattggtacg
    26161 gaaataaagc tcatgctgat acaggcgctg aatattggtg cctaaatccg cagcctgcag
    26221 catcgctttc gcggtgtcgg cactcagatc cagctgcgta tactgcggaa catacatgcc
    26281 accggttacc ggcacatccg tgcctgggcg gtattccaga cagttgacct catagtggta
    26341 gtcagaatcc ttacacactt ccagccctgg gaacgcgtcc agaattctct gttttgccgc
    26401 agccagtgac tcaggcgttt tgtggtcggc ttcatcaata aaggcgaatt gggttacctg
    26461 tttaccctca acttcttcct gccagctggc aacttccagc ttcggtttgt catcaggttt
    26521 gttttcttgc tgatatttcc agataacttc tttcgtggtg tcatcaatgg tatacggtgg
    26581 tttaccatcg acagccggat aacgctcata gacccaaatt ggcgttgaac gtcgttgacg
    26641 aacgcggtcc gggtagcctt gcgggtcgtt atttactacc gacttgttaa gcgccatcga
    26701 caaacctgcg gcatcaagca gacgtacaaa gccagatgcg ctctcttcct taagattgct
    26761 catcacgttt tccatgatca gcaccgatcc acctttgttc atataggcga tcaaatcggt
    26821 cacatcctgc tgggtcagct tcggtttgct ggtatctgcg cgcagaggaa tggagtaagg
    26881 atcgctaccc cattgtgtga cgtattcaaa gccattgagg atcaacagag gaacttcatc
    26941 tggattcaga ttgccatagc tggtcatcgg tttgaccgtg atgccagtga aatccttgtg
    27001 gaacgcaaac ggtgcgctat ttcccagcac ctgcccatgt tttttgaaat acaccgtctc
    27061 caggttagta cccacggtca tactggattt tgcatccggc aaccagcgat catttgacag
    27121 atagcgcagc acgttctcca tgaagttctt catgtcatcc gggtcgctgt tgagcgtaca
    27181 ctgcccatct ttattaacgc ccccgttcca gctgtaaccg ttcgggcaac gcaggatgct
    27241 gttgtagtgt gggttaccga taaccatcag cttgccatcg cccacttgcc ccagcgaaat
    27301 aaacggcagg ttaaaggtgg cggtatcgcg cgtaacgttt tccggctcaa caagagaagg
    27361 cgcttccgta atgtacgcca gctcgttttt atcccaggcg cgtttttcgc caaacgccag
    27421 ccagtagttt ttatcattac gcgccatcag aatcgggaag gccgcgttgg agatattcac
    27481 caccgcctga ccgcgcgcat tacccgtgct gccatagaag ttagtagagt catggaatac
    27541 atggaacttg ctgacagatt tgtagttcgt atccacgccc cacagcttgt taataacgcc
    27601 ctgaatctgg ccgtcattaa cattgcgcgt cgtcagcgag aaccagcgag cctcgttaca
    27661 accgtcgttt ttcgcacaaa tcgcggtatc gatctctttg gcctgacccg tcttaaactg
    27721 ctcgataaat tcgttaggca gattaacgac ttgctcacct tcccccagcg tcgcaccatt
    27781 ggataacgag agattgataa tctcgttaat cacgttggga tattcagcaa aaaccttgcg
    27841 tacttcatcc ggaactacac gcgtgtgatt ttgtccagcc ttcgaatagc ggtgaatcaa
    27901 ctgatcgata tttgccccgc gaacttcatc acccagttca gtcaatgcaa tagtcgactt
    27961 gttaccacgc acagaaccaa gctcaaaagt gtcgatgcca aaggagatgg tttcccccca
    28021 actaaaggaa aattccccgt tttctccggt tacaccacgg ccggaattgg tgtaatagtt
    28081 gacaccaaca acaccatccc cctgactatc gaccaggcga ccttctgaga gaatgatttc
    28141 cgaaggttga tactgataaa actgttccgc gttagccgac acgaaggaag cgtttagatc
    28201 cggttttgtt cccggagtgg tggcgggcac gaccggtgaa gtatgagtgg atggcgcttt
    28261 atcggtcgcg gcattgtttt ccacctcttc attgaccagc tttttgaact cttccggtgc
    28321 cagatcgatt tgcttataca gcgagtcgaa acgtttactc tcgatcaccg aggagaactc
    28381 caggcacacc tgttctgtat tcgccgggca actgttcatg gaggtgacca gcgagagcgc
    28441 attgcttttc ttgttgtcgg aacccgccag ttcttgcgcg tcctcaagac taaacgacac
    28501 tttttcaacc gcacgcaggc tacgcgcagc ttctgactgg gtgtcgaagg tagcaattgt
    28561 cgtgttgttc cctgccacac aggtgacttt gtcgcctggt gtaaaggtaa agccatcgct
    28621 ggattcatca ttacaggtga tatcaccagt tacccgcagg cttccgccca gggtcagata
    28681 acccgttttc gtaggaacag gttctggctc cggttctggt gttggctcag gatcaggtgt
    28741 cggttccggc gtaggttcag gctccggcgt tggctcaggc gtcggctccg ggtttggtgt
    28801 tggatcaggt ttcacttccg gcaaagaccc tgttccagaa tctacaggcg gcgtatcgga
    28861 ggaagatccg gaaccaccgc catcacaacc ggctaacagg gtt
//
LOCUS       DAPGWB010000048        28846 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.048, whole genome shotgun sequence.
ACCESSION   DAPGWB010000048 DAPGWB010000000
VERSION     DAPGWB010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 28846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28846
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.048"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            214..1080
                     /gene="folD"
                     /locus_tag="RHX79_002012"
     CDS             214..1080
                     /gene="folD"
                     /locus_tag="RHX79_002012"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDV2197184.1"
                     /translation="MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSN
                     PASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLP
                     AGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGL
                     NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG
                     DWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL
                     QACVEYHDPQDE"
     gene            1082..1294
                     /gene="ybcJ"
                     /locus_tag="RHX79_002013"
     CDS             1082..1294
                     /gene="ybcJ"
                     /locus_tag="RHX79_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308617.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein YbcJ"
                     /protein_id="HDV2197185.1"
                     /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGA
                     VETRKRCKIVAGQTVSFAGHSVQVVA"
     gene            1402..1923
                     /locus_tag="RHX79_002014"
     CDS             1402..1923
                     /locus_tag="RHX79_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDV2197186.1"
                     /translation="MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLS
                     FKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSL
                     LDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLP
                     GMVLMGMLWWRRR"
     gene            complement(1959..3344)
                     /gene="cysS"
                     /locus_tag="RHX79_002015"
     CDS             complement(1959..3344)
                     /gene="cysS"
                     /locus_tag="RHX79_002015"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDV2197187.1"
                     /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF
                     VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDA
                     LNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL
                     DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLG
                     NHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFT
                     VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG
                     GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLG
                     LLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE
                     DGPQGTTWRRK"
     gene            3518..4012
                     /gene="ppiB"
                     /locus_tag="RHX79_002016"
     CDS             3518..4012
                     /gene="ppiB"
                     /locus_tag="RHX79_002016"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase B"
                     /protein_id="HDV2197188.1"
                     /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV
                     INGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV
                     VDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESV
                     TVSE"
     gene            4015..4737
                     /gene="lpxH"
                     /locus_tag="RHX79_002017"
     CDS             4015..4737
                     /gene="lpxH"
                     /locus_tag="RHX79_002017"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDV2197189.1"
                     /translation="MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFE
                     AWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKV
                     LELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANS
                     KEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGA
                     WHTEGSMVKVTADDVELIHFPF"
     gene            4855..5364
                     /gene="purE"
                     /locus_tag="RHX79_002018"
     CDS             4855..5364
                     /gene="purE"
                     /locus_tag="RHX79_002018"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDV2197190.1"
                     /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSA
                     HRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD
                     SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVL
                     ENPDPRGAA"
     gene            5361..6428
                     /gene="purK"
                     /locus_tag="RHX79_002019"
     CDS             5361..6428
                     /gene="purK"
                     /locus_tag="RHX79_002019"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HDV2197191.1"
                     /translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQS
                     VITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAD
                     RSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSG
                     EVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELG
                     YVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVV
                     NSPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEA
                     LIPLLPPEYASGVMWAQSKFS"
     gene            complement(6565..7458)
                     /locus_tag="RHX79_002020"
     CDS             complement(6565..7458)
                     /locus_tag="RHX79_002020"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HDV2197192.1"
                     /translation="MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYR
                     LAIVHGNGPQVGLLALQNLAWKEVDPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVT
                     TVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQKALEAAYGWQMKRDGKYLRRVVASPQP
                     RKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGL
                     VILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAW
                     IGALSRIEETLAGEAGTCISL"
     gene            complement(7455..8270)
                     /locus_tag="RHX79_002021"
     CDS             complement(7455..8270)
                     /locus_tag="RHX79_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2877 domain-containing protein"
                     /protein_id="HDV2197193.1"
                     /translation="MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHR
                     QGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPP
                     SHPQPLAAAWMQRAEETGLFGPLAMAASDPLTAELRQFRHCFQAALNGVKTDWRHWLG
                     KGPGLTPSHDDTLSGMLLAAWYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQ
                     GYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGTP"
     gene            complement(8281..9540)
                     /locus_tag="RHX79_002022"
     CDS             complement(8281..9540)
                     /locus_tag="RHX79_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009029994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1116 domain-containing protein"
                     /protein_id="HDV2197194.1"
                     /translation="MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLH
                     AGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMG
                     GITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLS
                     AALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEV
                     MDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFT
                     APVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAAR
                     AVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQ
                     IGAGTVRAPLACFEQALEALAESMGIG"
     gene            complement(9550..11217)
                     /locus_tag="RHX79_002023"
     CDS             complement(9550..11217)
                     /locus_tag="RHX79_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
                     /protein_id="HDV2197195.1"
                     /translation="MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKA
                     LLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQSL
                     TQVRRWDSACQKLSDASLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLK
                     TRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGE
                     GITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMK
                     ATGKPTVALFLGYTPAVACDENVWFASSLDEAARLACLLSRVTARRNAITPASSGFIC
                     GLYTGGTLAAEAAGLLAGHLGVEADDTHHHGMMLDADGHQIIDLGDDFYTVGRPHPMI
                     DPALRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDSQPLYA
                     IATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSSATQQHTPSLL
                     ENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ"
     gene            11534..12583
                     /gene="allD"
                     /locus_tag="RHX79_002024"
     CDS             11534..12583
                     /gene="allD"
                     /locus_tag="RHX79_002024"
                     /EC_number="1.1.1.154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate dehydrogenase"
                     /protein_id="HDV2197196.1"
                     /translation="MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSH
                     GAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQ
                     QNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLA
                     FAAPGEGDEILTFDMATTVQAWRKVLDARSRNMSIPDTWAVDKNGAPTTDPLAVHALL
                     PAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSS
                     ELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISD
                     ALYNTSYETKNPFAQ"
     gene            12605..13840
                     /gene="allC"
                     /locus_tag="RHX79_002025"
     CDS             12605..13840
                     /gene="allC"
                     /locus_tag="RHX79_002025"
                     /EC_number="3.5.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allantoate deiminase"
                     /protein_id="HDV2197197.1"
                     /translation="MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFK
                     KRMAASGLETRFDEVGNLYGRLSGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWL
                     AIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNS
                     FVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTV
                     TLNGESNHAGTTPMGYRRDTVYAFSRICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNV
                     VPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKEL
                     VATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITD
                     LAEGVKTLALMLYQLAWQK"
     gene            13851..14636
                     /gene="allE"
                     /locus_tag="RHX79_002026"
     CDS             13851..14636
                     /gene="allE"
                     /locus_tag="RHX79_002026"
                     /EC_number="3.5.3.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(S)-ureidoglycine aminohydrolase"
                     /protein_id="HDV2197198.1"
                     /translation="MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFEN
                     CDATILSTPKLGASFVDYLVTLHQNGSNQQGFGGEGIETFLYVISGNITAKAEGKTFA
                     LSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYE
                     GMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN
                     WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI"
     gene            complement(14765..15910)
                     /gene="glxK"
                     /locus_tag="RHX79_002027"
     CDS             complement(14765..15910)
                     /gene="glxK"
                     /locus_tag="RHX79_002027"
                     /EC_number="2.7.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate 3-kinase"
                     /protein_id="HDV2197199.1"
                     /translation="MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADG
                     GEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPE
                     KRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQV
                     LVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEM
                     VEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAV
                     NLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVH
                     QYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN"
     gene            complement(15932..17233)
                     /locus_tag="RHX79_002028"
     CDS             complement(15932..17233)
                     /locus_tag="RHX79_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308602.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil/xanthine transporter"
                     /protein_id="HDV2197200.1"
                     /translation="MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLL
                     TLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATS
                     LAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFG
                     IADPNFKIQLPPFALSVAVMCLVLGMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSH
                     SLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTR
                     YRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVP
                     ALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMA
                     LPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE"
     gene            complement(17290..18651)
                     /gene="allB"
                     /locus_tag="RHX79_002029"
     CDS             complement(17290..18651)
                     /gene="allB"
                     /locus_tag="RHX79_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase AllB"
                     /protein_id="HDV2197201.1"
                     /translation="MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVM
                     DASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDR
                     ASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDND
                     FRDVNDWQFFKGAQKLGELGQPVLVHCENVLICDALGEEAKREGRVTAHDYVASRPVF
                     TEVEAIRRVLYLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTD
                     QFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGG
                     IAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQ
                     PNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILK
                     HQQ"
     gene            complement(18711..20165)
                     /locus_tag="RHX79_002030"
     CDS             complement(18711..20165)
                     /locus_tag="RHX79_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative allantoin permease"
                     /protein_id="HDV2197202.1"
                     /translation="MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVP
                     NYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVR
                     GALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLI
                     TFLLFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGLGPIFDYIPSG
                     IQKAENSGFLFLVVINAVVAVWAAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFA
                     VAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAG
                     YQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMM
                     AHYFVVMRGKINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIPFMEPLS
                     RVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG"
     gene            complement(20334..21212)
                     /gene="glxR"
                     /locus_tag="RHX79_002031"
     CDS             complement(20334..21212)
                     /gene="glxR"
                     /locus_tag="RHX79_002031"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HDV2197203.1"
                     /translation="MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSMGAV
                     SVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKR
                     FARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVG
                     GNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHG
                     ERMIKRTFNPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDH
                     SALVQALELMANHKLA"
     gene            complement(21312..22088)
                     /gene="hyi"
                     /locus_tag="RHX79_002032"
     CDS             complement(21312..22088)
                     /gene="hyi"
                     /locus_tag="RHX79_002032"
                     /EC_number="5.3.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase"
                     /protein_id="HDV2197204.1"
                     /translation="MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEE
                     LKQVLASNKLEHTLHNLPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKI
                     NCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQ
                     ALKLIDDVGCCNLKIQYDIYHMQRMEGELTNTMTQWADKIGHLQIADNPHRGEPGTGE
                     INYDYLFKVIENSDYNGWVGCEYKPQTTTEAGLRWMDPYR"
     gene            complement(22101..23882)
                     /gene="gcl"
                     /locus_tag="RHX79_002033"
     CDS             complement(22101..23882)
                     /gene="gcl"
                     /locus_tag="RHX79_002033"
                     /EC_number="4.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate carboligase"
                     /protein_id="HDV2197205.1"
                     /translation="MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIR
                     HILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITG
                     QAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLV
                     DLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINAD
                     AAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFG
                     IGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQ
                     EMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTT
                     IGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPERKVVAISGDFDFQ
                     FLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYG
                     VDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSE
                     LDNVMEFEDIADNAADAPTETCFMHYE"
     gene            complement(23972..24787)
                     /gene="allR"
                     /locus_tag="RHX79_002034"
     CDS             complement(23972..24787)
                     /gene="allR"
                     /locus_tag="RHX79_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor AllR"
                     /protein_id="HDV2197206.1"
                     /translation="MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVS
                     DISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVA
                     GPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKAL
                     LYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCI
                     ASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP"
     gene            complement(24865..25347)
                     /gene="allA"
                     /locus_tag="RHX79_002035"
     CDS             complement(24865..25347)
                     /gene="allA"
                     /locus_tag="RHX79_002035"
                     /EC_number="4.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HDV2197207.1"
                     /translation="MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALV
                     EILEQDRTLISINRAQPANLPLTIYELERHPLGTQAFIPMKGEVFVVVVALGDDKPDL
                     STLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
                     "
     gene            25577..26503
                     /gene="allS"
                     /locus_tag="RHX79_002036"
     CDS             25577..26503
                     /gene="allS"
                     /locus_tag="RHX79_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AllS"
                     /protein_id="HDV2197208.1"
                     /translation="MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENT
                     GVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLL
                     YHPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFS
                     LDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQK
                     EIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKF
                     GSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS"
     gene            26572..27666
                     /gene="mnmH"
                     /locus_tag="RHX79_002037"
     CDS             26572..27666
                     /gene="mnmH"
                     /locus_tag="RHX79_002037"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HDV2197209.1"
                     /translation="MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMN
                     NDERAAVGTCYKQQGSDAALALGHKLVAGEIRQQRMDAWRAACLQNPQGILCCARGGQ
                     RSHIVQSWLHAAGIDYPLVEGGYKALRQTTIQATIELAQKPIVLIGGCTGCGKTLLVQ
                     QQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQNLRLWVLEDES
                     RMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQ
                     EYCEYLHHGLSAIKRRLGLQRYNELAARLDAALTTQLATGSTDGHLAWLVPLLKEYYD
                     PMYRYQLEKKAEKVVFRGEWAEVAEWVKAR"
     gene            27782..28146
                     /locus_tag="RHX79_002038"
                     /pseudo
     CDS             27782..28146
                     /locus_tag="RHX79_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014543172.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(28667..>28846)
                     /locus_tag="RHX79_002039"
     CDS             complement(28667..>28846)
                     /locus_tag="RHX79_002039"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197210.1"
                     /translation="EQVAKIVSENDPDTKKVWCKYGKIPGQGDSVNLFFVGEINVTHY
                     FITNIGAGLPDACAE"
BASE COUNT         7108 a         7814 c         7178 g         6746 t
ORIGIN      
        1 taaacaagga aataaatcag ttccagattt acaacgccat catggacgaa aaatgaagct
       61 ttcaatctca gcgacctcag cgacggtgcg cctaaccttc gcaagaggtc gcttcacgcg
      121 ataaatctga aacgaaacct gacagcgcgc cccgcttctg acaaaataga cgcatcccct
      181 tcgacctacg taacagatgg aatcctctct ctgatggcag caaagattat tgacggtaaa
      241 acgattgcgc agcaggtgcg ctctgaagtt gctcaaaaag ttcaggcgcg tattgcagcc
      301 ggactgcggg caccaggact ggccgttgtg ctggtgggta gtaaccctgc atcgcaaatt
      361 tatgtcgcaa gcaaacgcaa ggcttgtgaa gaagtcgggt tcgtctcccg ctcttatgac
      421 ctcccggaaa ccaccagcga agcggagctg ctggagctta tcgatacgct gaatgccgac
      481 aacaccatcg atggcattct ggttcaactg ccgttaccgg cgggtattga taacgtcaaa
      541 gtgctggaac gtattcatcc ggacaaagac gtggacggtt tccatcctta caacgtcggt
      601 cgtctgtgcc agcgcgcgcc gcgtctgcgt ccctgcaccc cgcgcggtat cgtcacgctg
      661 cttgagcgtt acaacattga taccttcggc ctcaacgccg tggtgattgg cgcatcgaat
      721 atcgtcggtc gcccaatgag catggaactg ttgctcgcag gttgcaccac taccgtgact
      781 caccgcttca ctaaaaatct gcgtcatcac gtagaaaatg ccgatctgtt gatcgttgcc
      841 gttggcaagc caggctttat tcccggtgac tggatcaaag aaggcgcaat tgtgattgat
      901 gtcggcatca accgtctgga aaatggcaaa gttgtgggcg acgtcgtgtt tgaagacgcg
      961 gctaaacgcg cctcatacat tacgcctgtt cccggcggcg ttggcccgat gacggttgcc
     1021 acgctgattg aaaacacgct acaggcgtgc gttgaatatc atgatccaca ggatgagtaa
     1081 catggcgaca ttttctttag gtaaacatcc gcacgttgag ctgtgcgact tgctgaaact
     1141 ggaaggctgg agcgaaagcg gcgcgcaggc gaaaatcgcg attgccgaag gccaggtgaa
     1201 agtcgacggt gcggttgaaa cgcgcaaacg ctgcaaaatc gtcgccggtc agacagtgag
     1261 ttttgcaggt cacagcgtac aggttgttgc ctgatccctt tcccggcctg tatcaacagg
     1321 ccggttctct tttcagactt ttgccctcta cgccccgttc atccatgctg atagcatcga
     1381 cattttgccg aagcgaccat catgccaacc gttattacgc acgccgctgt tcccctatgc
     1441 attggtttag ggttgggttc gaaagtcatc cctccgcgtc tgttatttgc cggaatcatc
     1501 ctggcgatgc tgcccgacgc cgacgtattg tcgtttaaat ttggcgttgc ttacggcaat
     1561 gtttttggtc atcgcgggtt tacccattcg ctggtgtttg cgtttgttgt cccgctgtta
     1621 tgtgtgctga ttggacgccg atggttcagg gctgggctga ttcgctgctg gctgttttta
     1681 accgtctcgt tgctatcgca cagcttgctg gattcggtaa ccactggcgg taagggcgtt
     1741 ggctggctgt ggccgtggtc agatgaacgc tttttcgctc cctggcaggt gattaaagtc
     1801 gcgccgtttg cattgtctcg ttacaccacg ccgtacgggc atcaggtgat aatttctgaa
     1861 ttgatgtggg tgtggttgcc ggggatggtg cttatgggaa tgttgtggtg gcgcaggcga
     1921 taaccggatg cgaaaactcg catccggcaa cagcgcaatt acttacgacg ccaggtggtc
     1981 ccttgcgggc catcttccag cacgatcccc atctcgttaa gacggtcacg cgccgcatct
     2041 gccgccgccc agtctttcgc tttacgggca tccagacgct gttgaattaa cgcttcaatc
     2101 tcagccactt cgctgtcgtc tgcctgcgcg ccgctttgca ggaacgcttc cggttcttgc
     2161 tccagcaggc ccaatacagc ggaaagttta cgcaggtgag atgccattgc attcgccgct
     2221 gccatatctt ctgctttcag acggtttact tcacgcgcca tatcaaacag tacggaatag
     2281 gcttccgggg tgttgaaatc gtcgtccatc gcttcaataa agcgcgcttc aaacgcttcg
     2341 ccaccggcag gcgcaacggt tttatctgtg ccgcgcagcg cagtgtagag acgctccagc
     2401 gccgcacgcg cctgcttcag gttctcttcg ctgtagttca actggctgcg atagtggccc
     2461 gacatcagga agtaacgcac ggtttccgcg tcgtagtatt tcagcacatc gcgcacggta
     2521 aagaagttac ccagcgattt ggacatcttc tcgcggtcaa ccatcaccat ccccgagtgc
     2581 atccagtagt tcacatactg gccatcatgg gcacaggtgg actgcgcgat ttcgttctcg
     2641 tggtgcggga acatcaggtc tgaaccgccg ccgtggatat caaagtggtt acccagctgc
     2701 ttgcagttca ttgccgaaca ttcaatgtgc cagcctggac ggcccgcgcc ccacggagac
     2761 ggccagctcg gttcgccctc tttcgacatc ttccacagaa cgaagtccat cgggttgcgt
     2821 ttgtcgtcga ccacgtcaac gcgcgcacct gcctgcagct ggtcgagatc ctgacgcgac
     2881 agcacgccat atgtcggatc ggtcgggacg tcgaacatca cgtcgccgtt gtccgccaca
     2941 taagcgtgac ctttggcgat cagttgttca gtgagttcaa taatttctgc gatatggtgc
     3001 gtcgcgcgcg gctccatatc cgggcgcaga atgttcaaag catcaaaatc tttgtgcatt
     3061 tcggcgatca tgcgatccac cagcgccaca aagctttcgc cattttcatt ggcgcgtttg
     3121 atgattttgt cgtcgatatc ggtaatgttg cgcacatact tcagtttata gccgaggaaa
     3181 cgcagatagc gcgcaaccac gtcaaaagca acaaaggtac gcccgtgacc gatatgacag
     3241 agatcgtaaa cggtgattcc acacacatac atgccgactt ccccggcgtg aataggctta
     3301 aattcctctt tttggcgtgt cagagtattg aagattttta gcatcgaaga ttccgtttag
     3361 acatgtgtgg gtaattgagt tgcgtataat acccatattt cccgcgcgaa tcagcataca
     3421 ttgcgtgatg atccgatcgt gcggttatgc tataacacca ccctatatat gacccgaact
     3481 gggttgaagc accaatcaaa cggaacagga tgcaaaaatg gttactttcc acaccaatca
     3541 cggcgatatt gtcatcaaaa cttttgacga taaagcacct gaaacagtta aaaacttcct
     3601 ggactactgc cgcgaaggtt tttacaacaa caccattttc caccgtgtta tcaacggctt
     3661 tatgattcag ggcggcggtt ttgaaccggg catgaaacaa aaagccacca aagaaccgat
     3721 caaaaacgaa gccaacaacg gtctgaaaaa tacccgtggt acgctggcaa tggcccgtac
     3781 tcaggctccg cactctgcaa ctgcacagtt cttcatcaac gtggttgata acgacttcct
     3841 gaacttctct ggcgaaagcc tgcaaggttg gggctactgc gtgtttgctg aagtggttga
     3901 aggcatggac gtggtagaca aaatcaaagg tgttgcaacc ggtcgtagcg gtatgcacca
     3961 ggacgtgcca aaagaagacg ttatcattga aagcgtgacc gttagcgagt aatcgtggcg
     4021 acactcttta ttgcagatct tcatctctgc gtggaagaac cggcgatcac cgccggtttt
     4081 ctgcgttttt tagcggggga agcccgcaag gccgacgcgc tgtatattct tggcgatctg
     4141 tttgaagcat ggattggcga cgacgatccc aacccactcc atcgccagat ggcggcagcg
     4201 atcaaagcgg tgtccgattc cggcgttccc tgttatttca ttcatggcaa ccgtgatttt
     4261 ctgctcggca aacgctttgc ccgtgaaagc ggcatgacat tattgccgga agaaaaggtg
     4321 ctcgaacttt atggtcgccg ggtgttgatt atgcatggcg acacgctgtg caccgatgac
     4381 gcgggttatc aggcttttcg cgccaaagtc cacaaaccct ggctgcaaat gctattcctc
     4441 gccctgccgt tgtttgtgcg caaacgcatt gccgcgcgaa tgcgagcgaa cagtaaagaa
     4501 gccaacagca gtaaatcgct ggcgatcatg gacgttaacc aaaacgcggt agtcagtgcg
     4561 atggaaaaac atcaggtgca atggctgatc cacggacata cccatcgccc ggcggtacat
     4621 gaacttatcg ccaaccagca acctgctttt cgcgtggtac tcggtgcctg gcatacggaa
     4681 ggttcgatgg tgaaagtcac ggcggatgac gttgagctga ttcattttcc gttttaaaaa
     4741 acccacaact ttgctgattt cacagccacg caaccgtttt ccttgctctc tttccgtgct
     4801 attctctgtg ccctctaaag ccgagagttg tgcaccacag gagttttaag acgcatgtct
     4861 tcccgcaata atccggcgcg tgtcgccatc gtgatggggt ccaaaagcga ctgggctacc
     4921 atgcagttcg ccgccgaaat cttcgaaatc ctgaatgtcc cgcaccacgt tgaagtggtt
     4981 tctgctcacc gcacccccga taaactgttc agcttcgccg aaagcgccga agagaacggt
     5041 tatcaggtga ttattgcggg cgcaggtggc gcagcgcacc tgccaggcat gattgccgcc
     5101 aaaacgctgg tgccggtgct gggcgtgcca gtacagagcg ccgcactgag cggtgtcgat
     5161 agcctctact ccatcgtaca aatgccgcgc ggcattccgg tgggtacgct ggcgattggt
     5221 aaagctggcg cggcaaacgc ggcattactg gcagcacaaa ttctcgcgac tcacgataaa
     5281 gagctacacc agcgtctgaa tgactggcgc aaagcccaga ccgacgaagt gctggaaaac
     5341 ccggacccgc gaggtgcggc atgaaacagg tttgcgtcct cggtaacggg cagttaggcc
     5401 gtatgctgcg tcaggcaggc gaaccgttag gcattgctgt ctggccggtc gggctggacg
     5461 ctgaaccggc ggcggtgcct tttcaacaaa gcgtgattac cgctgagatc gaacgctggc
     5521 cggaaaccgc attaacccgc gagctggcgc gtcatccggc ctttgtgaac cgcgatgtgt
     5581 tcccgattat tgctgaccgt ctgactcaga agcagctttt cgataagctc cacctgccga
     5641 ccgcgccgtg gcagttactt gccgatcgca gcgagtggcc tgcggtgttt gatcgtttag
     5701 gtgagctggc gattgttaag cgtcgcactg gtggctatga cggtcgcggt caatggcgtt
     5761 tacgcgccga tgaaaccgag cagttaccgg ctgaatgcta cggcgaatgt attgtcgagc
     5821 agggcataaa cttctctggt gaagtgtcgc tggttggcgc gcgcggcttt gatggcagta
     5881 ccgtgtttta tccgctgacg cataacctgc atcaggacgg tattttgcgc accagcgtcg
     5941 ctttcccgca ggccaatgcg cagcagcaag cgcaagccga agagatgctt tcggcgatta
     6001 tgcaggagct gggctatgtg ggcgtgatgg cgatggagtg ttttgtcacc ccgcaaggtc
     6061 tgctgatcaa cgaactggca ccgcgtgtgc ataacagcgg tcactggaca caaaacggtg
     6121 ccagcatcag ccagtttgag ctgcatctgc gggcgattac cgatctgccg ttaccgcaac
     6181 cggtagtgaa tagtccgtcg gtgatgatca acctgattgg tagcgatgtg aattatgact
     6241 ggctgaaact gccgctggtg catctgcact ggtacgacaa agaagtccgt ccggggcgta
     6301 aagtggggca tctgaatttg accgacagcg acacatcgcg tctgaccgcg acgctggaag
     6361 ccttgatccc gctgctgccg ccggagtatg ccagcggcgt gatgtgggcg cagagtaagt
     6421 tcagttaagc aggtgctcat ttgattgccg gatgcggcgt aaacgcctta tccggcttac
     6481 cgctccggta cccattgtag gcctgataag acgcgtcaag cgtcgcatca ggcatggtgc
     6541 accgattgcc ggatgctctc atcactacag cgaaatacag gtccccgctt cgcccgccag
     6601 cgtctcttca attcgcgata acgccccaat ccacgcgggt ttaccacggc ttctgacata
     6661 accacttacc gccgttacct tcggccccat cgaaccatcg gctttggcaa atggcgctaa
     6721 ctcatccggt gtggcatggc gaatggcgcg ttgctgcggc gttccccagt tttcataaac
     6781 cgcgtcagca tcggtgagga tcaccagtcc atcggcatta atctgctcgg cgagcaacgc
     6841 agcggcgaga tctttatcaa tcaccgcttc actccctgcc ccatcttccg tcacaggcac
     6901 accgccgccg ccactgcaaa tcaccacatg cccctctttg agcaacaact cgatggcttc
     6961 gctgtcgaga attttacgcg gttgcggaga cgccaccacc cggcgcaaat atttaccatc
     7021 acgtttcatc tgccagccgt aagccgcttc cagtgccttt tgttcttctg gctgataaac
     7081 cggaccaata aatttctctg gctgcaaaaa cgccggatca tcaggcgaaa cctcaatgcg
     7141 cgtcagcacc gtcgtgacag gcggcatctg cggctgtgcg ctcaaactct gcgccagcat
     7201 atagccaatc atcccctggc tttccgccac cagcacatcc agcggatacg gatctacctc
     7261 tttccacgcc agattctgca atgccagcag ccccacctgc ggcccattgc cgtgaacaat
     7321 cgccagccga taagaacggg ccaggcgcgc cagcgcgggt acagcactgg cgatattgcg
     7381 atattgattt tctgccgtca gcgcctcacc gcgctggagt aaggcgttgc ccccaagagc
     7441 tacaaccagt gttttcatgg tgttccttgt aataattgtt gaccaagcca gaaccccagc
     7501 agcgtatctg cccctgacgt gtgccccagc gccagcagcg aatcaatcgc aacagcggta
     7561 cgtttcgggc aactcagagc atgaacaaag tgcaggagtg gcgaggcgaa atatccttgc
     7621 gcggcgtagc gtaaataact gacgctcacc gctgtggtaa cgagttgaag attgtcggag
     7681 caggcaaaaa acgggcgacc ggagcgcgca tctaaagcgc cataatacca ggccgccagc
     7741 agcattccgc tcaacgtgtc atcatgactt ggcgttaatc cggggccttt acccagccag
     7801 tgccgccagt cggtcttaac gccattgagc gcggcctgaa aacagtgacg aaactggcgt
     7861 aattcagcgg tcagcggatc gcttgccgcc atcgccagtg gtccgaaaag tccggtttcc
     7921 tccgcgcgtt gcatccatgc agctgcaagc ggttgaggat gtgaaggcgg cgtaatacgc
     7981 agcaaacaat aacgctgtgg ctgtttaacc gtgaaacgcc cgaggcgaat cccttgagcc
     8041 acaacctgtg gtcgttcatt gccgcataat ccaccgcata acgcatcgaa ttgcgcgcgg
     8101 cgaagcaccc atcctccggg gccgaaacca ctaccctgac gatgcagcgt taacagttcg
     8161 ccgctttccg tcatcaggtt aatcgcccgt cgccacactc ccgctaaccg ccaggactgg
     8221 cgataattcg gtgcactacg gctggcaagc agaggatgga tgatcgtcat tgcgcgttcc
     8281 tcaaccaatc cccatgcttt cagccagtgc ttccagcgcc tgttcaaaac acgccagcgg
     8341 tgcccgcaca gtgcctgcgc caatctgccc gatccccgcc tctttatggg cgataccggt
     8401 attgatgagt ggcgtaatgc cggtttctac cacgcgacga atgtccagtc ccaggcacgc
     8461 gccctgaaaa tcccagcctg ggatctgcaa ctgcatattg cgctcaaggt aaatttccgc
     8521 catctcttca gataccgctc tggccgcttc catgccaccc gcaccgacaa agcgcgttac
     8581 gccaggcgct gcgatcattg ccgcacctcc gataccaaag gtttcggtaa tcgcgctatc
     8641 gcccatatcc gggttcgcct gctcctgcga gaagccggtg aaaaacagac cttgcggagt
     8701 gtttacaggc gcagtaaacc agcgttcgcc cagcccgctt acccgaatcc cgaacatatt
     8761 gccgttgcgg gtcattgccg tgacgatgct gcctgcgcgg atcatcgcgc cagcatccat
     8821 cgccgccttg cagtaagcca tcgcgaggtt gaggaagaac tgatcggtca cgctgaggaa
     8881 atccatcact tcggcgatgt gctgtttatc atgatcgagg cgagcaattt gtggggccag
     8941 cgcacgcatt aacagtgcag aggaagcaat attgcgttga tggaactcat cgcccatcgt
     9001 aatgccctgc gccatcatcg ccgtgagatc gataccgcgc tccatgcgcc ccagcgccgc
     9061 gcttaatact ggcattaaca catcgcgcat ccagcgatgg cgagtcagga catcttcgcc
     9121 gtaagcgcca aaacgcatca ctttgccgat accttcgttg aggttgcagt acgcccggtt
     9181 gccgtcggtc acgttctcga ccaccagcat cggcatactg gcagaagtaa tgccgcccat
     9241 tggcccgacg gcattcacat ggtgacaagg aatgaagttc acttccccct gctccagtat
     9301 tgccagcgcc tgcgcttcat ctttcgccca gccttcgaac agacatgcgc ccacgcacgc
     9361 ccctttcatg ggtccggtca tctcctgcca gcgcattggc ggcccggcgt gaagcagtgt
     9421 tttgccctcg tttagttcgc tgataagtga agaagccggt tgcacatcca gccagtgtgg
     9481 acgagcgcga cgaatttgtt cgataaccgc agcattggct tgcgccactg atgtaaacat
     9541 gggaacccct tattgcaaac gttctaataa acgagccagt tttttattgc cgccggcgac
     9601 tggcgaccat tggtaatgca caaccggttt gctggcgctt tgtagctcca gcgcaaagct
     9661 gcgtaatccg atgttaatca cggcgacgtt ttccagtaat gacggtgtgt gttgctgtgt
     9721 ggcagacgag agcggatgaa ttaacgctgc cgccagcaag gtggcttccg gtagcgaact
     9781 cactaccgcg atccccgcat cttccagcgt ggcgatttgc tgcgagcggc attgcgggtc
     9841 acgttcggta cctgtcaccg tggcaatggc gtacagcggt tggctgtctg aacgcgcggc
     9901 acaggctttt tgccaggcgc tcaccagcga ggcagcagga tcggcggtcg caccgaagcc
     9961 aatcacgaca tcaagcagca acacgcgcac ttgcggttta gcgccgagat cggcaattaa
    10021 ctgattgcgt aaggctgggt cgatcatcgg atggggacgc ccgacggtgt agaaatcatc
    10081 gccgaggtca ataatctggt gaccatcggc gtcgagcatc atgccgtgat gatgggtatc
    10141 gtcggcttcc acgccaaggt gcccggcaag taatcccgcc gcttcggcag ccagcgtacc
    10201 gccggtatac aaaccgcaaa taaatccgct gctggcaggc gttatcgcgt tacgtcgcgc
    10261 cgtaacgcgt gaaagcaggc aagccaggcg tgcggcctca tccagcgagg aggcaaacca
    10321 gacattctcg tcgcaggcca ccgccggggt ataacctaaa aacagcgcca ccgtcggttt
    10381 gccggttgct ttcatggcat taacaatttt cagacgcaca gcttcggcag gcggttttga
    10441 aacaaatgcc agcacttcgc ttttctcgtc tgcactgagc atttccagcg ccgtcagcgc
    10501 actgatgccg cccacttcac ggctgaggtc gcgcccgcca aggccaatcg cgtgagtaat
    10561 tccctcccct gccagcgcaa tctgtgagca cagctcctga atcccggtac cggaagcgcc
    10621 aatgacgcca atgttgcctt ccggcatcac gttagcaaaa gccagcggcg tgccggcaat
    10681 catcgacgta ccgcagtccg gccccatcac cagcaagcct ttttctcgcg cgcgggtttt
    10741 aagttggatt tcatcttcca gcgtgacgtt atcggagaac atcatcacgt tgaggttgcg
    10801 atccagcgcc tgattcgcca gctccgccgc atactcgcca gccactgaaa tcagcgccag
    10861 actggcatcg gataatttct gacaggcact gtcccagcga cgcacctgcg tcaaggactg
    10921 gctgctgcct gacccctgcg ccagttgttt tagcgcctct tcaagctgct gcataatcgc
    10981 ctgcgcgatc cccgcatccg ccgcttcgct acgaattgcc acgcaaatat cgttcggcgt
    11041 ggcgttatta aaatcgtcat gccagaaacc tgtggtatct aataacgctt tattggcggg
    11101 cgtacccatc attacggaaa catcatcaac attttctgat tcgctgagtt ttcgtgaaat
    11161 aatcattaaa ctgaccgaat cctgaaaaca ccctttttta ataaaggcgt ggatcataac
    11221 aactccttaa aaattgcacc catggcaatt gcacgagcag tgttaatgtg gcgattacgg
    11281 tatcgatgac aacgggtaaa taaggtgatg aatatcacac agggattatt aacaaaagaa
    11341 ttcaaataac cgccatgcta ttacgtgtta ttttttaata agcgtggttg ttttaaaaac
    11401 caggttaaaa gcgagcggat tatcaaataa attctaacta tatttttttg cctgtctgga
    11461 tcacataatc cagatatttt ccctgtatgt taattgcagt catgcttcac accgtcgtta
    11521 aaaaggaaga cagatgaaaa tcagtcggga aacactccac cagctaattg agaataaact
    11581 ctgccaggct gggttaaaac gtgagcacgc tgcaaccgtg gctgaagtat tggtttacgc
    11641 cgatgccaga gggatccact ctcatggcgc ggtgcgcgtg gaatactacg cggaacgcat
    11701 ttcaaaaggc ggcaccaacc gcgaaccgga gtttcgtctt gaggaaaccg ggccgtgctc
    11761 ggcaatttta catgccgaca atgccgccgg acaggtcgcg gcgaaaatgg gtatggaaca
    11821 tgccatcaaa accgcccagc aaaatggcgt tgcggtggtc ggtatcagcc ggatgggtca
    11881 cagcggcgca atctcttatt ttgtgcagca ggcagcccgc gccggattca ttggcatttc
    11941 gatgtgccag tccgatccaa tggtggtgcc gtttggcggc gcggaaattt actacggtac
    12001 taacccactg gcctttgccg cgccgggaga aggcgacgag atccttacct ttgatatggc
    12061 gactaccgta caggcatggc gaaaagtgct cgacgcccgc tcgcgtaata tgtctatccc
    12121 ggatacctgg gcggtcgata aaaacggagc accaacaacc gatccgctcg cggtacatgc
    12181 tctgctcccc gccgccgggc cgaaagggta tggcctgatg atgatgattg acgtcctctc
    12241 aggcgtctta ctcggcttac cgttcgggcg acaggttagt tcgatgtatg acgatttaca
    12301 cgccgggcgt aatttggggc aattacatat agttattaat ccgaactttt tctcctccag
    12361 cgaattattc cgtcaacatc ttagccagac catgcgcgaa ttaaatgcca ttacccccgc
    12421 gcccggtttt aatcaggttt attatcccgg acaggatcag gatattaaac aacgcaaagc
    12481 cgccgtcgaa ggcatcgaaa ttgttgatga tatttaccag tatttaattt ccgacgcgct
    12541 ttataacacg tcatacgaaa cgaaaaatcc ctttgcgcaa taattattga gacaggactt
    12601 tcttatgatt acacatttcc gtcaagccat agaagaaacg ctaccctggc tctcctcttt
    12661 tggcgctgac ccagcgggtg ggatgacccg tttactttat tcgccggaat ggctggaaac
    12721 ccagcagcaa tttaaaaaaa gaatggcagc aagcgggctg gaaacacgtt tcgatgaagt
    12781 ggggaattta tacggtcgcc tgagtggcac cgaatatcca caggaagtgg ttctgagcgg
    12841 ttcgcatatc gataccgtgg ttaacggcgg taacctcgac gggcaattcg gcgcgctggc
    12901 ggcgtggctg gcaattgact ggttgaaaac gcaatacggc gcgccgttac gtacggtcga
    12961 agtggtggcg atggcagaag aagaaggcag ccgcttcccg tatgtcttct ggggcagtaa
    13021 aaatatcttt gggctggcga accctgacga cgtgcggaat atctgtgatg ccaaaggaaa
    13081 tagttttgtc gatgcgatga aggcttgcgg atttactctg ccgaacgccc cactaactcc
    13141 gcgtcaggat attaaagcct ttgttgaact gcatattgaa cagggctgtg tgctggaaag
    13201 taatggtcaa tcaattggcg tggtgaatgc aattgtcggg cagcgtcgct atacggtgac
    13261 gctgaacggc gaatcaaacc atgcaggcac cacgccgatg ggttatcgtc gtgatacggt
    13321 ttacgctttc agtcgcattt gccatcagtc gatcgaaaaa gcgaaaaaga tgggcgatcc
    13381 gctggttctg acctttggca aagtagagcc gcgtccgaat acggtgaatg tggtaccggg
    13441 taaaaccacg ttcaccattg attgtcgtca taccgacgct gccgtgctgc gcgatttcac
    13501 ccaacagtta gaaaacgaca tgcgggcgat ttgcgatgaa atggacattg gtattgatat
    13561 cgatttatgg atggacgaag aacccgtgcc gatgaataag gagctggtcg ccaccctgac
    13621 agaattgtgt gaaagtgaaa aactgaatta ccgggtgatg cacagtggtg ccgggcacga
    13681 cgcgcaaatt ttcgcgcctc gcgtaccaac ctgcatgatt ttcattccca gcatcaatgg
    13741 gatcagccat aacccggcgg aacgcaccaa tattaccgac cttgccgaag gggtcaaaac
    13801 gttggcactc atgctttatc aacttgcctg gcagaaataa ggagtcataa atgggatatt
    13861 taaataacgt caccggttac cgcgatgatt tactggctaa ccgtgcgatt gttaaacacg
    13921 gtaatttcgc gctgttaacc ccggatggtc tggtaaaaaa tattattccg ggctttgaaa
    13981 attgtgacgc gacaatcctc tccacgccaa agctgggtgc ctcttttgtt gattatctgg
    14041 tcacactgca tcaaaacggt agcaaccaac agggcttcgg tggcgaaggc attgaaacgt
    14101 tcctgtatgt gatctctgga aatatcactg ccaaagccga aggcaaaaca tttgccttaa
    14161 gcgaaggtgg ctatctttat tgcccaccag gctccttaat gacgtttgtt aacgcccagg
    14221 ccgaagacag ccaaatcttt ttatataagc gccgctatgt tccggtagaa ggccatgcac
    14281 cgtggctggt ttctggcaat gccagcgaac tggaacgcat tcactatgaa ggtatggatg
    14341 atgtgatcct gctggatttt ctgcccaaag agttaggttt tgatatgaac atgcatatcc
    14401 tctcttttgc accaggtgcc agccacggtt atatcgaaac acatgttcag gaacacggtg
    14461 cctatattct ttccggtcag ggggtttata acctcgacaa taactggatc ccggtgaaaa
    14521 aaggcgatta catctttatg ggcgcttatt ctttacaggc tggttatggc gtagggcgtg
    14581 gtgaagcgtt cagctatatt tactcgaaag attgtaaccg cgacgtcgag atttaagtca
    14641 taccactcgc ctgattattt ttagctatgt tggattttgc cacggtttat accgtggctt
    14701 tttttgtagt aaattcaggt aaaaaaagat gcgatataaa tcgcatccgc tttaaaggta
    14761 agggtcagtt tttaattccc tgacctattt taatggcgca ggcaatattt cgtgcgctgt
    14821 tgaagagatt ggtttcaccg ctggcgagca cttcggctaa aggtgccaga cgtggcaaaa
    14881 tgctgaatac cgcatcaatg ccgtactggt gcaccacttc cacgccatca cccaatacgc
    14941 cagcaatccc aatcaccggt acattaaact gcttcgccac cgacgccaca cccagcggcg
    15001 ctttaccgcc tgccgtttgc gagtcgatgc gcccttcccc ggtaatcacc agtgctgcgc
    15061 cctgcactgc ctgcgcaaga ttgaccgcat tcaacacaat ctcaatacct ggtttaatat
    15121 ccgcattgag aaataccgcc gccgcaatac ccataccgcc cgcagcgccg ccgcccgcca
    15181 tctggcagac gttgatttca gtttgctgtt gtaaaacacg ggcgtaattt tgcagcccct
    15241 gttccagctc ttcgaccatt tccggcgttg cccctttttg cgggccaaac accgccgccg
    15301 cgccgcgtgc ccctaccagc gggttatcaa cgtcacatgc tacttcaata tggcaattcg
    15361 ccagacgcgg atcgcattca tccatctcaa tgcttgccac gcgcgctaaa ttaccgccgt
    15421 tagccaccag cacctgaccg tcggcatcaa ggaaacgcac accgagcgcc tgcgccatgc
    15481 ccataccacc gtcgaccgtc gcactgccgc caatgccgag aataatatgg cgaatgccgt
    15541 tatccagcgc atgacgaatt aactcccccg taccaaaact ggaggccagc aacggattac
    15601 gcttttcagg cgcgaccagc atcaggccac ttgctgccgc catctcaatc accgccgttt
    15661 tcccgtcgcc ggtaaggcca taaaaagcat tcactttttc gcccatcggc ccgcagactt
    15721 caagcgtcac gatgttgccg cccgtcgcgg cgaccatcgc atccaccgtc ccttcgccgc
    15781 catccgctat cggcaaacag atatagttcg catcgggaaa gagggtcgaa aacccggctt
    15841 taattgcctg acaacatttt tctgcactta agctctcttt aaaagagtct ggcgcaatga
    15901 caatcttcat tatcaatcct ttttcaacaa attattcgat gcgttcccac ggaataagat
    15961 tatccataag aacagccagt aaaatcccga ccagtaagcc gttactgagc agaggacgca
    16021 gcgttaatgg aaggtcttgc agatacacag gcggtaatgc cattaaaaat atgccgacaa
    16081 ataacggcaa tgcgagtcga taaatattgc gagcggtaaa cgttatttgc tggctaaaca
    16141 ccagcgcgga aaagagtaaa ggcagataag aaaccagcat gaccgcacta ctcacgggta
    16201 aagggatact gcaaaacagt cgtgtgagtg ccggaaccag cgccaccaga aggcaaataa
    16261 cgctgccata aataaatgaa cgccgcgtgt aatcgccagt ctgggttaat aaaccaatgg
    16321 atgaaacaaa cggtgaaaat ggaattaccg ccagcggtac ggttatcagc gtcataaatc
    16381 cggtcgccac aaagctgcga cgataacgcg tattccccgc gccctgctgc ggataaaaaa
    16441 catccgtgcc ccgaatcgca ccgtaggtat tgctgatatt caccagacct gtaatcaccg
    16501 ccgtcagaat aattcccgga gacaaagcac ctccactgcc gagcgggaac cactgccagt
    16561 gcaactcacc ggagagcgag tgcgaagaag gaaagcaaaa gtaccacaac aaccagccgg
    16621 ttatggtgcc gaccagcagg ccataacggg caaaacgttg cggcaggaag ataatcatcc
    16681 ccagtaccag gcacatcacc gccaccgaga gcgcgaacgg cggtaactga attttaaaat
    16741 ttgggtcggc tatgccaaac ggcagcccga gcataccttt gaaaaagata gtggtcagct
    16801 gcgcgcccag catcaacata aacaagacca tcaccgacgg cgtaaataac cgtgccaggc
    16861 gatggcctaa tccgctaaaa ccaatcaaca tcgtcagcac gccggagagc gcaatcccca
    16921 ccgccaggct ggtagcgata tcgttgatcg gtgtcccgcg cgatgcttcg ccaagggtga
    16981 tagtaaggat ggttccccac cacaggccac ccggcccttc cataatagcg cgacgatgac
    17041 cgcagaacgc ctgagcgaag caggccagtg cggtagcaag aaaagcatat tgcgtgagcg
    17101 taagcaggct actttgcggc aactgaaaag cagaaagtag cgtaggagga accacaaccg
    17161 tgttgcaaaa aataaagaaa aaccactgaa atcctgataa caggctttcg cggctcactg
    17221 caaaattgaa cataaacaca ccttaaccgg agaatgcccg ccgcaaggac gggcattgca
    17281 ggggccagat tactgctgat gtttaaggat aaattgacct ttcggcgcaa cagggaagcc
    17341 ctgttcaatg tcgtaaatca catcaccacg taagatggtt ttcgtgatac gcgcgccaat
    17401 ggtacggcca acatacgggc tgactttgtg gcgatattcc agatcgtcat tggtaagaac
    17461 atagctgcta ttcggctgaa tgaagacgaa gtcggcatct tttcctgggg cgatacggcc
    17521 tttttgctgc agaccgaaaa tatctgctgc gttagtcgcc attaatttgc cgaacattgg
    17581 cagagacatt ccgcgtttct gtaccgcttc atcgaacatc acgtccatac agttttgcag
    17641 accggcaata ccgccccatg cttccatgat gttgccggct ttcatttccg gagggcatgg
    17701 tgagtggtcg gaaaccaggc agtcgatttc accgttaaac agtttttccc acatgccttt
    17761 ctggttttcc agatcgcgga tcggcggtga acacttcgcc agagtgccga tttcttcgaa
    17821 ctgatcggta tccagtacaa agtaatgcgg gcaggattca caagtaacgt cctgaccttc
    17881 ctgacgtgca cgagtcactt cttcaacgcc ttccgggctg ctgatatggc aaacgtgcag
    17941 acggcaaccg gcaactttcg ccagatacag cacgcggcga atcgcttcca cttcggtaaa
    18001 taccggacgc gaagccacat agtcatgggc agttacgcga ccttcacgtt tcgcttcttc
    18061 gcccagtgcg tcacagatca gcacgttttc gcagtgcacc agcaccggct gccccagttc
    18121 gcccagcttc tgcgcacctt tgaagaactg ccagtcgttt acatcacgga agtcgttgtc
    18181 gataccgcga tcgccacagg tcgcaacgaa gcatttgaag ccgacaacgc ccacttcatc
    18241 cagctcatgc agacggtcga tgttgtaaga caccaggcca ccgagttgtg ccgcatcgat
    18301 agtcagcttg cctttagcgg catcgaactt cagttcaatt gaagcgcggt caaccgttgc
    18361 aggcagctgg ttgagcggca tttcgatcat ggtggtgata ccaccttttg ccgctgcgcg
    18421 agtaccggtt tcataacctt cccagtggct acgacccggt tcagaaatat gggtgtgcgc
    18481 atcaaccatg cccggcgaaa ccaccagacc agacgcatcc ataacttctt ttgcatcgcc
    18541 cagatcctga ccgatagcag caattttccc gcctttaacg gcgatatcta caacgcgagc
    18601 ttcgttttct aaaataacgg tgccgttttt aatgattaaa tcaaaagaca taacaaactc
    18661 cttgtaaaat acagattggt ttttaactca atgttcaata tcgggattaa ttaacctatg
    18721 gttttttgct ctcctgtttt ttctgctgtt gtacgtttct ttaataaggc gtaggccgca
    18781 aaggcgacga tgacgccgac aaaccatgaa acacgcgata acggttccat aaagggaata
    18841 aacttaccgc caagagataa aataacggcc accagagtta ctgaaaacgc agtgaggtta
    18901 aaaccgttat cgtaatattt ataatcgcca ggtgcggtat acagttcatc aagattaatt
    18961 ttcccacgca tcaccacaaa ataatgcgcc atcatgacac caattaccgg accaagcatt
    19021 ccgccgataa tatcgaggaa cagataaata ctgtcctgat tttccattaa tttccacggg
    19081 cagatcagaa ggctgataat actggcaatc agtacgccgt ttttataggt cagtttcgtc
    19141 ggtgcaatag cggcaatctg ataaccggca ggaataatat taccggtggc gttagtggag
    19201 atagtcgtca tcagaataac cagtaccgca aagaacgagg cgaacaagct gtcccaacgc
    19261 tgaacaatat ccagcacgtt ccaggtatca gcgccgtaat gaatactggc tccggcaata
    19321 atacataccc ccgcgaccgc aaacagaata taggccacaa ctaaacccag cgtttgcccc
    19381 agcgcttgct cacgaaacga gtgggcgttt tgcgtaaagt cggatgcgct caccgccggt
    19441 gccgcccaga ccgcaactac cgcgtttatc accaccagga acaggaagcc actgttttct
    19501 gctttctgaa taccgctcgg aatgtagtca aagattggac cgagcccgac cagcgaaatc
    19561 gcccaaatcg ccataccgcc gaaaacgata tagatgcacg ggttaagaat ggcagtgaat
    19621 ttatttaaaa ctttgccacc gccaaaacct ataccaacgt tgaccagcca gaagagtaag
    19681 aaagtaatta agcccggtag agaaagccct aacagcgtga aatcaccacc gagagttaaa
    19741 aatcccggcc agattttgcc aatcagaatc aagcaggcca gtgaccccgc gtaacattgc
    19801 aggccaaacc acataatggc agcaataccg cctcttaata atccgggaaa cagtgcgcca
    19861 cgtacgccgt aagaagcacg caggatcatg gcaaacggta cgccgtattt actgcccgca
    19921 gcgccgttta ataccattac cgcggcaatg aaaaaggcgc tgaggataat tgccagcata
    19981 atactaaagg tagacaagcc gagaataaaa aagccgccga ccatcacata attgggaacg
    20041 ttatgaaccg aacccatcca taaggtaaaa tagttaaatg ttttccaggt ccgctggctt
    20101 tgcgttttcg gcaatagatc ttcgctatag ccgcgttgct ggaatagttt tctctgatgt
    20161 tccataaatc cctcttaatt tcacgtatcg aataacgttg ttttaatcta gctatgagga
    20221 acaaataaaa taaaaatatt atttttaata ctgaagcaac atctttggct gctttctttt
    20281 ttaatattgc tggccgattc attttctgat atcggccatt tttattgcgg gtatcaggcc
    20341 agtttatggt tagccattaa ttccagcgcc tgcactaacg cagagtgatc caactggctg
    20401 ccaccgtttg ccgcacaggt attaaataac tcctggcagg tcgcagtgtt tggcaggttc
    20461 agcgcaagtg ctttcgcact ttgcagtgcc aggttgagat ctttctggtg cagagcgatt
    20521 ttgaagcccg gattaaaggt gcgtttaatc atacgctcgc catgaacttc cagaatacgt
    20581 gaggaagcaa agccgcccat cagcgcctgg cgcacacgta ccgggtccgc accggctttt
    20641 gaagcaaata gcagggcttc agaaaccgct tcaatattga gtgccacaat aatctgattt
    20701 gccactttgc aggtttgacc gtcgccgtta ccgcccacga gggtgatatt tttaccgagc
    20761 agttcaaaca gcggtttaac acgttcaaat accgcttcat caccgccaac cataatcgac
    20821 aacgtccctt cacgcgcacc gatttcaccg ccggagactg gcgcatcgag ataatcgccg
    20881 cccagttcat tcacctgacg agcgaaacgc ttagtttcaa tcggggaaat ggagctcata
    20941 tcaacaatgg ttttgccctt cagcgaggct ttggtacaac cattttcacc gaacagaact
    21001 tcttcaacct gaggtgtgtc cggcaccata ataaaaatga tgtccgatgc ttccgttacc
    21061 tggcgagcag tttcaacact gacggcaccc attgacagta attcatcagc aaccggtcca
    21121 atggtcgtga catgtaattg atgaccggca cgcgccagat taatggccat cggtgtaccc
    21181 ataatgccta agccaataaa tcccagtttc ataattaacc tcttttaaat ttcgcttttc
    21241 ctgaattcag acaacacgat cccctgccaa cttagcggcc taaaaaagca ttgtctgaat
    21301 agcgttacgt tttaacggta cggatccatc cagcgtaaac cggcttccgt ggtggtttgg
    21361 ggtttatatt cacacccaac ccaaccgttg tagtcagaat tttcgattac cttaaagaga
    21421 taatcataat taatttctcc ggttcccggt tcgccgcgat gcggattatc ggcaatttgc
    21481 aggtgaccaa ttttatcagc ccactgagtc atggtgttgg ttaattcacc ttccatccgc
    21541 tgcatgtgat aaatgtcata ctgaattttc aaattgcagc aaccaacatc atcaatcaat
    21601 ttcagcgcct gccgagttcc ggtgagatgg aaaccaggaa tatcaaaatg gttaataggt
    21661 tcaatcagta ataaaatatc ttctttcatc agcatattcg cggcataacg caggttttct
    21721 acaagcgttg cgtgaatctg ttcactgctg aaaccagccg gcgttttacc gaccagacag
    21781 ttaatttttt tattacccag cgcacgggca taacgaatcg ctgctgctac gccatcccga
    21841 aactcttctt cacggccagg aatacaggca ataccgcgct cccccgccgc ccagtcaccc
    21901 gccggtaaat tgtgcagcgt atgttcgagt ttattactcg ccagcacctg ttttaattct
    21961 tcaatgtcgt agtcataagg aaacataaat tcaacgccgc gaaaaccaca ctgcgcagct
    22021 ttctcaaaac gggcgagaaa atcatattct ccaaataaca tcgataaatt agcagagaaa
    22081 cgtaacatta tttatctccc ttattcatag tgcatgaagc aggtttcagt cggtgcgtcc
    22141 gctgcgttat cggcgatatc ttcaaattcc atgacgttat ccagttcgct gcccatcgaa
    22201 atattggtca cacgctcgag aataacttcc acgactaccg gtacccgata ttgcgccatt
    22261 aaggctttcg cctgttcaaa ggctggcgca atatcttccg gtttgaagac gcgaatcgct
    22321 ttacaaccta aaccttccgc tacttttacg tggtcaacac cgtagccatt cacttcactg
    22381 gagttgatat tctcgaaagc gagttgcacg cagtagtcca tatcaaacgc gcgctgcgac
    22441 tggcgaatca gccccagata agcgttattg accagtacat ggatgtacgg aatgttgaac
    22501 tgtgcgccaa cggccaattc ttcaatcagg aactggaagt cgaagtcacc ggaaatcgcc
    22561 accactttgc gctctggatc agcggcacaa acccccagcg ccgccggaat ggtccagccc
    22621 agcgggcctg cctgcccaca gttgatccag tggcggtctt taaagacatg cagcatttgc
    22681 gcagcggcaa tttgcgacag accaatggtg gtgacatagc aaacatcgcg accaaaggct
    22741 ttgttcatct cttcatacac gcgctgcggt ttcaccggca cgttgtcgaa atgggttttg
    22801 cgcagcaaag tgcgtttgcg ctgctggcag tcggcgaccc attctttacg acacggcaga
    22861 cgacccgctt tttgcatctc ctgcgccact tcaaccagca gtgtcagcgc cgctttagca
    22921 tcagagacaa tgccgagatc cggacacagc acgcgaccaa tttgcgtcgg ctcaatatcg
    22981 atatgaacga ttttgcgccc ttcggtgtat ttctctaccg aaccggtatg acggttagca
    23041 aaacggttac cgataccaaa caccatgtcg gacgccagca acgttgcgtt accgtaacga
    23101 tgcgcggttt gcagacccac catcccggcc atcagttcat gatcgtccgg gatacagccc
    23161 cagcccatca gcgttgggat caccggaacg ctggtcagtt cagcaaactg ttgtaacagt
    23221 gcagctgcgt cagcattaat taccccgccc ccggcaacaa tcaccggacg ttcggcctgg
    23281 attaacattt ctacagcttt ttcgatctgc atacggctgg cagcaggttt gtagaccggc
    23341 agcggttcgt acatatcagg atcaaactcg atttccgcaa cctgaacgtc gaacggtaaa
    23401 tccaccagta ccggacccgg acgaccagaa cgcatcaggt gaaatgcctg ttgcaacaca
    23461 cgaggcacca gcgccgcttc acgtactgta accgccattt tacttaccgg cttggcgata
    23521 gcttcgatat caacagcctg gaaatcttct ttatgcagac gggcgcgcgg agcctggcca
    23581 gtaatacaca gaataggaat ggaatcagca gaagcagaat agagcgcggt gatcatgtcc
    23641 gtgcccgcag gaccggaagt ccccagacat acgccgatat tccctgccgt tgcgcgggta
    23701 taaccttccg ccatgtgcga agcaccttcc acatgacgcg ccagaatgtg acgaataccg
    23761 ccgtgcttac gcatcgctga gtagaacgga ttgattgcag ctcccggaac gccgaaggcg
    23821 gtggtgatac cttctttctc cagcacatac attgccgcgt caacggctct catttttgcc
    23881 attttattcc tacctctatt aattggaaaa attttccaac tttcaaattt tgtcaaaaaa
    23941 acccgctccg cagagcggga tgcgacagac actatggatg tgctttcagt cccaacgccg
    24001 tgctgatatc gcgggcggtg tctctgacca gctcaccctg actgacaaaa cgatcttctg
    24061 tcagtcttga tgaaggcccg gagatggaga tagcggcaac aacgctaccg acatcatcgt
    24121 aaattgctga agctatgcaa ttcagaccta caacatgctc ttctttatct acggtatagc
    24181 ccagttcacg cgcttgttcc aggtccttca gcaaggtggg catatccaca agcgtagttg
    24241 gcgtaaactg ctgcaaaccg gtttgcagaa tgatgctcat caactcctct tccgccagcg
    24301 gataaagcag cgctttgccc gcaccggaag catgcagcgg cagacgactg cccagtggcg
    24361 cacacatcct gaccattgat ttacactcta actgaccaat taatactgct tcattgccgt
    24421 tacggatcgc gacattgacc gtttcgccgg aaagtaacat caggcggcgc ataaacggcc
    24481 cggcgacgga gaggacatcg cggttatgga tgtacgccgc accgacgtta aagacaccta
    24541 atcctatatg ccaccagcct aattgactgt cctgatagac aaaatccgct gcctgtaaaa
    24601 ccttcagcaa gcgaaaggtc gtggagagcg gcaaatccag attgagagaa atatcgctaa
    24661 ccgacgaact tcccccactt ttttccagat attgcagaat cgcaattccc cgctctaacg
    24721 cctgtgcgcc cttctgtgcc acaggctccg cctgtcctgg cctgccgcgc cgtctaactt
    24781 ccgtcatacc tacgttaact ccgacctaca agtgagcata aacaatgaac aattagttta
    24841 tcttatgcaa gtcggttgca ggcgtcacgc aaaacagagt tcctgttcag gaatactttc
    24901 aacatcacag ttgtcactgc cgccgcgatc gatggtcaga aaatcggtga cgcgctgcca
    24961 ggcgaaaagt gggtgatgcc agacgttacg atggtaattc actccctgtt cgccgttggt
    25021 gataaacgcc cgcagcgttg acaggtctgg tttgtcgtcg cctaacgcca cgaccaccac
    25081 aaacacttca cctttcatcg ggataaaggc ctgagtgccc agcggatgac gttcgagttc
    25141 gtaaatggtc agcggcagat tcgccggttg cgcgcggtta atgctgataa gcgtacggtc
    25201 ttgctcaaga atctcaacca gcgccaaatc gtggtaacgc tccaccaggc cattgttaat
    25261 atggaaaaaa tcccgttgct gagtttcgat tacgtcgcca taagcactaa aggcttcctg
    25321 acttaacggt aatacctgaa gtttcatctt tttgtccttg taacataatt ccgttcaacc
    25381 atcgccgacc ggtcagcttg gtttcaataa caggcaatct aaaaccttaa gagaacaaca
    25441 tcaatacaaa agttggaata tttttccaaa actagattta gtccacaaat tgaacagggt
    25501 tatcatgtaa aaatactgat aaatcagagg ataagaaaat cacgcaactt gcggatttaa
    25561 aaggggatac ctgaagatgt tcgatccaga aaccttgcgg actttcattg cggttgctga
    25621 aacaggaagt ttttcaaaag cggcagaacg attatgtaaa accacggcga cgatcagtta
    25681 tcgcattaaa cttctggaag agaataccgg agtagcgctg tttttccgca cgactcgcag
    25741 cgtgacgttg acagcggctg gcgagcatct actttcccag gccagagact ggctgagctg
    25801 gctggaaagt atgccaagcg agctgcaaca ggtgaatgat ggcgtggaac gccaggtgaa
    25861 tattgtcatc aacaacctgc tctaccaccc ccaggccgtc gcccagttgc tggcgtggct
    25921 gaatgaacgt taccccttta cccagtttca catctcccga caaatctata tgggcgtctg
    25981 ggattcgcta ttatacgaag gtttttcact ggctatcggc gtcacgggaa ccgaggcgct
    26041 ggcaaatacc tttagtcttg atcccttagg atcggtgcaa tggcgctttg tcatggcggc
    26101 ggatcatccg ctggcgaacg ttgaagagcc gctaacagaa gcgcagttgc ggcgctttcc
    26161 ggcggtcaat attgaagaca gcgcccgcac cttaaccaaa cgcgtcgcct ggcgattgcc
    26221 tgggcaaaaa gagattattg ttcctgatat ggaaacgaaa atcgccgccc atcttgcggg
    26281 cgttggcatt ggttttttgc caaaatcgct ttgccagtca atgatcgata atcaacaact
    26341 agttagccgg gtaatcccaa cgatgcgccc tccttcgcca ttgagtctgg catggcgcaa
    26401 atttggcagc ggcaaagcgg tagaagatat tgtgaccttg tttacccagc gcaggccgga
    26461 aatcagcgga tttttagaaa ttttcggcaa cccacgcagt taaaaatcaa gtttccttgc
    26521 gcgttggcgc gtaaaatagc gcgcaagctg atttgaggtt cacttttaac tatgcaagag
    26581 agacacacgg aacaggacta tcgtgccctg ctgattgctg atacgcccat tattgatgtt
    26641 cgcgccccta tcgagtttga gcaaggcgca atgcccgccg ctatcaatct gccgttaatg
    26701 aataacgatg aacgcgccgc cgttggcacc tgttataaac agcaagggtc agacgcggcg
    26761 ctggcgctgg gtcataaact ggtggcgggt gaaattcgtc agcagcgtat ggacgcctgg
    26821 cgggcagcgt gcctgcaaaa tccgcaaggt attctctgct gcgcccgtgg cggtcagcgc
    26881 tcacatattg tgcaaagctg gttgcatgca gcggggattg attatccgct ggtggaaggc
    26941 ggttataagg cactgcgcca gaccacgatt caggcgacta ttgaactggc acaaaaaccg
    27001 atagtgctga ttggcggttg taccggctgc ggcaaaacgc tgttagtgca acaacagccg
    27061 aacggtgttg atctggaagg gctggcgcgt catcgcggtt cggcgtttgg tcgcacctta
    27121 caaccacaac ttagccaggc gagttttgaa aacctgctgg ctgccgaaat gctaaaaacc
    27181 gacgcccgtc agaatttgcg cctgtgggtg ctggaagacg aaagccggat gatcggttcg
    27241 aatcacctgc cggaatgcct gcgcgagcga atgactcagg cggcgattgc ggtggtagaa
    27301 gatccgtttg agatccgtct tgagcgcctg aacgaagagt atttcttgcg tatgcatcat
    27361 gattttaccc acgcgtacgg cgacgaacag ggctggcagg agtattgcga atacctgcat
    27421 cacggacttt cggcgatcaa gcgtcggctg gggctacagc gctataacga actggctgca
    27481 aggctggatg cagcgctgac aacgcaactc gcaaccggta gcaccgacgg tcatctggcc
    27541 tggctggtgc cgttacttaa agaatattac gacccaatgt atcgctatca gcttgagaaa
    27601 aaagcggaaa aagttgtctt tcgcggtgag tgggcggaag tggcggaatg ggttaaggcg
    27661 cggtaatgag ggacgtattt gtattagtcg cgacttgatc tgacacatgg ccttgaaagg
    27721 ttgagagtta ccggttttga tatgagtgtc gaatccttat ccaaaacaag aggtaactct
    27781 catgcttcat actgccaatc ccgtcatcaa acacaaagcc ggtttgctca atctggctga
    27841 agaactcagc aacgtatcaa aagcctgtaa aatcatgggc gtttcgcgtg atacgtttta
    27901 tcgttaccgc gaactggtcg ctgaaggcgg tgtggatgcg cagattaatc gtagtcgccg
    27961 cgctcctaac cttaagaacc gtaccgatga ggcaactgaa caggctgttg ttgattacgc
    28021 cgtcgctttc ccgacacatg gtcagcaccg ggccagcaac gagctgcgta aacagggggt
    28081 tttatctccg acagtggtgt ccgttctgtc tggttactcc ataaccttga gaatctcaaa
    28141 agacgatact gaacaaattt tatcaggtga cgttccgtaa aaagttgtat ggagttctcg
    28201 atgcagtcgg cgcgactatc agtacccccg ctgaaccttg gactatcggg ccgccgtact
    28261 ggggcatgtc accctggcgt gccgctggtt ttccgctaat ggtttatttc ctctttcttt
    28321 cccggcaaga atttatttta atccggaagg attatttatt ttcagatagg gactcacatt
    28381 aaacacgtaa cattttaatt aatgcatggc tgaatatgta ttacacaatg tcagatatcg
    28441 taaaagacca gtgcaattct atgtaaactc tctgactgtt cattttattt gttgtttcag
    28501 ggtcggaact caccctcaat aaacaactga atacgagtag atattcatcg tctgagctat
    28561 atggctttac acaatagccg acatgtcttt tctcagtcag gaattttact tttcctcact
    28621 acgaagttga cgacttcgat atgggataga ctcttaattc aagcaattac tctgcacaag
    28681 catcaggcaa tccagctcca atatttgtta taaaataatg cgtaacatta atttcaccaa
    28741 caaaaaaaag gtttacgcta tccccttgcc ctggtatttt accatattta caccacactt
    28801 tttttgtatc tggatcattc tctgatacga ttttcgccac ttgttc
//
LOCUS       DAPGWB010000049        28802 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.049, whole genome shotgun sequence.
ACCESSION   DAPGWB010000049 DAPGWB010000000
VERSION     DAPGWB010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 28802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28802
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.049"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(93..356)
                     /gene="cedA"
                     /locus_tag="RHX79_002040"
     CDS             complement(93..356)
                     /gene="cedA"
                     /locus_tag="RHX79_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division activator CedA"
                     /protein_id="HDV2197211.1"
                     /translation="MRLVKPVMKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVW
                     MLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE"
     gene            539..2800
                     /gene="katE"
                     /locus_tag="RHX79_002041"
     CDS             539..2800
                     /gene="katE"
                     /locus_tag="RHX79_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase HPII"
                     /protein_id="HDV2197212.1"
                     /translation="MSQHNEKNPHQHQSPLHDSSEAKPGMDSLAPEDGSHRPAAEPTP
                     PGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGNRGP
                     TLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKIT
                     PVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFV
                     HAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHT
                     FRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEY
                     ELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFH
                     PGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHR
                     MGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHP
                     RLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIEL
                     TDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALK
                     AKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIADIADNGDAN
                     YYLMEAYKHLKPIALAGDARKFKATIKVADQGEEGIVEADSADGSFMDELLTLMAAHR
                     VWSRIPKIDKIPA"
     gene            complement(2847..3605)
                     /gene="chbG"
                     /locus_tag="RHX79_002042"
     CDS             complement(2847..3605)
                     /gene="chbG"
                     /locus_tag="RHX79_002042"
                     /EC_number="3.5.1.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitin disaccharide deacetylase"
                     /protein_id="HDV2197213.1"
                     /translation="MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAID
                     HAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQ
                     ELASQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVVRFAAEEGIALRIDRQPLSNSG
                     DLPANLRSSQGFSSAFYGEEISEALFLQVLDDASHRGDLSLEVMCHPAFIDNTIRQSA
                     YCFPRLTELEVLTSASLKYAIAERGYRLGSYLNV"
     gene            complement(3618..4970)
                     /gene="celF"
                     /locus_tag="RHX79_002043"
                     /gene_synonym="chbF"
     CDS             complement(3618..4970)
                     /gene="celF"
                     /locus_tag="RHX79_002043"
                     /gene_synonym="chbF"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HDV2197214.1"
                     /translation="MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEDG
                     KEKLDIIFELCQRMIDNAGVPMKLYKTLDRREALKDADFVTTQLRVGQLPARELDERI
                     PLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVY
                     RHTGFKRFIGVCNIPIGMKMFIRDVLMLKDSDDLSIDLFGLNHMVFIKDVLVNGKSRF
                     AELLDGVASGQLKASSVKNIFDLPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEY
                     YKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGAYYSDAACEVINAIYNDKQA
                     EHYVNIPHHGHIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMGLIHTIKGFEIA
                     ASNAALSGEFNDVLLALNLSPLVHSDRDAELLAREMILAHEKWLPNFADCIAELKKAH
                     "
     gene            complement(5075..5917)
                     /gene="chbR"
                     /locus_tag="RHX79_002044"
     CDS             complement(5075..5917)
                     /gene="chbR"
                     /locus_tag="RHX79_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ChbR"
                     /protein_id="HDV2197215.1"
                     /translation="MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDY
                     YEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFE
                     QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRH
                     YREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVTLSAKSQEYLTRATQRYYGKTP
                     MQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT
                     EFNQ"
     gene            complement(5925..6275)
                     /gene="chbA"
                     /locus_tag="RHX79_002045"
     CDS             complement(5925..6275)
                     /gene="chbA"
                     /locus_tag="RHX79_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIA"
                     /protein_id="HDV2197216.1"
                     /translation="MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQ
                     GDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARE
                     LITELIELHEKLKA"
     gene            complement(6326..7684)
                     /gene="chbC"
                     /locus_tag="RHX79_002046"
     CDS             complement(6326..7684)
                     /gene="chbC"
                     /locus_tag="RHX79_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIC"
                     /protein_id="HDV2197217.1"
                     /translation="MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAM
                     FVLINNVFLSFGEGSFFYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFI
                     GMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVA
                     EMFTFIVRRNWVIKLPDSVPASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQII
                     MDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQ
                     YGSVEAALAAGKTFHIWAKPMLDSFIFLGGSGATLGLILAIFIASRRADYRQVAKLAL
                     PSGIFQINEPILFGLPIIMNPVMFIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTM
                     PTGLGAFFNTNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANAL
                     KF"
     gene            complement(7769..8089)
                     /gene="chbB"
                     /locus_tag="RHX79_002047"
     CDS             complement(7769..8089)
                     /gene="chbB"
                     /locus_tag="RHX79_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIB"
                     /protein_id="HDV2197218.1"
                     /translation="MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLA
                     GEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKK
                     AAAN"
     gene            complement(8388..8726)
                     /gene="osmE"
                     /locus_tag="RHX79_002048"
     CDS             complement(8388..8726)
                     /gene="osmE"
                     /locus_tag="RHX79_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmE"
                     /protein_id="HDV2197219.1"
                     /translation="MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMS
                     RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA
                     EYDTDPQAAK"
     gene            8928..9755
                     /gene="nadE"
                     /locus_tag="RHX79_002049"
     CDS             8928..9755
                     /gene="nadE"
                     /locus_tag="RHX79_002049"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HDV2197220.1"
                     /translation="MTLQQQIIKALGAKPQINAEEEIRRSIDFLKSYLQTYPFIKSLV
                     LGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQ
                     PDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGT
                     DHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALGCPEHLYKKAPTADLEDDR
                     PSLPDEVALGVTYDNIDDYLEGKNVPEQVARTIENWYLKTEHKRRPPITVFDDFWKK"
     gene            9985..10872
                     /gene="cho"
                     /locus_tag="RHX79_002050"
     CDS             9985..10872
                     /gene="cho"
                     /locus_tag="RHX79_002050"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease Cho"
                     /protein_id="HDV2197221.1"
                     /translation="MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGES
                     DTMPLYIGKSINIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQ
                     QPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQSIA
                     DEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCW
                     PWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEDATTLIRTPAGFDHDGYKILCKPL
                     LSGNYEITELDPANDQRAS"
     gene            complement(10832..11407)
                     /gene="ves"
                     /locus_tag="RHX79_002051"
     CDS             complement(10832..11407)
                     /gene="ves"
                     /locus_tag="RHX79_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310475.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="environmental stress-induced protein Ves"
                     /protein_id="HDV2197222.1"
                     /translation="MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIA
                     ANGEFSLFPGMERIVTLLEGGEMFLESADRFNHTLKPLQPFAFAADQVVKAKLTAGQM
                     SMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFD
                     GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ"
     gene            complement(11610..12095)
                     /gene="spy"
                     /locus_tag="RHX79_002052"
     CDS             complement(11610..12095)
                     /gene="spy"
                     /locus_tag="RHX79_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-independent periplasmic protein-refolding
                     chaperone"
                     /protein_id="HDV2197223.1"
                     /translation="MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKF
                     GPHQDMMFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAKAE
                     AQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATA
                     E"
     gene            complement(12425..13393)
                     /gene="astE"
                     /locus_tag="RHX79_002053"
     CDS             complement(12425..13393)
                     /gene="astE"
                     /locus_tag="RHX79_002053"
                     /EC_number="3.5.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase"
                     /protein_id="HDV2197224.1"
                     /translation="MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQG
                     ALVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDM
                     NRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGV
                     LPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFG
                     QNDLRQFAVTASAIAALLSGESVGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFM
                     PFEKGTLLAQDGEERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS"
     gene            complement(13386..14729)
                     /gene="astB"
                     /locus_tag="RHX79_002054"
     CDS             complement(13386..14729)
                     /gene="astB"
                     /locus_tag="RHX79_002054"
                     /EC_number="3.5.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HDV2197225.1"
                     /translation="MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRQAAKQ
                     GLLKMKALADAGFPQAVIPPHERPFIPVLRQLGFSGSDEQVLEKVARQAPHWLSSVSS
                     ASPMWVANAATIAPSADTLDGKVHLTVANLNNKFHRSLEAHVTESLLKAIFNDEEKFS
                     VHSALPQVALLGDEGAANHNRLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREAS
                     EAVARLNQVNPQQVIFAQQNPDVIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLAN
                     LRARVNGFMAIEVPATQVSVSDAVSTYLFNSQLLSRDDGSMMLVLPQECREHAGVWGY
                     LNELLAADNPISELKVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDTLFN
                     ALNDWVDRYYRDRLTAADLADPQLLREGREALDVLSQLLNLGSVYPFQREGGGNG"
     gene            complement(14726..16204)
                     /gene="astD"
                     /locus_tag="RHX79_002055"
     CDS             complement(14726..16204)
                     /gene="astD"
                     /locus_tag="RHX79_002055"
                     /EC_number="1.2.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate-semialdehyde dehydrogenase"
                     /protein_id="HDV2197226.1"
                     /translation="MTLWINGDWITGQGASRVKRNPVSGEVLWQGNDADAAQVGQACR
                     AARAAFPRWARLSLAERQVVVERFAGLLERNKGELTAIIARETGKPRWEAATEVTAMI
                     NKIAISIKAYHVRTGEQRCEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALL
                     AGNTIIFKPSELTPWSGEAVMRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLF
                     TGSANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQR
                     CTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAW
                     QQLEAMGGRTLLAPRLLQSETSLLTPGIIEMTGVAGVPDEEVFGPLLRVWRYDSFEEA
                     ILMANNTRFGLSCGLVSPEREKFDQLLLEARAGIVNWNKPLTGAASTAPFGGIGASGN
                     HRPSAWYAADYCAWPMASLESDSLTLPATLNPGLDFSDEVVR"
     gene            complement(16201..17235)
                     /gene="astA"
                     /locus_tag="RHX79_002056"
     CDS             complement(16201..17235)
                     /gene="astA"
                     /locus_tag="RHX79_002056"
                     /EC_number="2.3.1.109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine N-succinyltransferase"
                     /protein_id="HDV2197227.1"
                     /translation="MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAI
                     KTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELN
                     VYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVV
                     AEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLS
                     QEAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVE
                     VAEGQPAQGDFPACLVANENYHHFRVVLARTDPATERLILTAAQLDALKCHAGDRVRL
                     VRLCAEEKTA"
     gene            complement(17232..18452)
                     /gene="astC"
                     /locus_tag="RHX79_002057"
     CDS             complement(17232..18452)
                     /gene="astC"
                     /locus_tag="RHX79_002057"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylornithine/acetylornithine transaminase"
                     /protein_id="HDV2197228.1"
                     /translation="MSQPITRENFNEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDF
                     AGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFC
                     NSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAP
                     LPADIRHAAYNDINSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNA
                     LLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGFPVGALLATEECARVMTVG
                     THGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRG
                     LGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDR
                     FAAACEHFVSRGSS"
     gene            18897..19703
                     /gene="xthA"
                     /locus_tag="RHX79_002058"
     CDS             18897..19703
                     /gene="xthA"
                     /locus_tag="RHX79_002058"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDV2197229.1"
                     /translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPL
                     EEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGN
                     VTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLD
                     IGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSK
                     GFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR"
     gene            19870..20580
                     /locus_tag="RHX79_002059"
     CDS             19870..20580
                     /locus_tag="RHX79_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HDV2197230.1"
                     /translation="MNAERKFLLACLIFALVIYAIHTFGLFDLLTDLPHLQTLIRQSG
                     LFGYSLYILLFIIATLFLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARW
                     LGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTITFWP
                     YTLISALTTLPGIVIYTVMASDLANEGITLRFILQLCLAGLALFILVQLAKLYARHKH
                     VDLSASRRSPLTHPKNEG"
     gene            20585..21262
                     /gene="ydjY"
                     /locus_tag="RHX79_002060"
     CDS             20585..21262
                     /gene="ydjY"
                     /locus_tag="RHX79_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YdjY"
                     /protein_id="HDV2197231.1"
                     /translation="MSQHYSVSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSN
                     SQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEAL
                     KEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
                     GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLAT
                     VTFKITE"
     gene            21277..21984
                     /locus_tag="RHX79_002061"
     CDS             21277..21984
                     /locus_tag="RHX79_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001697152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HDV2197232.1"
                     /translation="MMKIQSRKIWYYRITLIILLFAMLLAWALLPGVHEFINRSVAAF
                     AAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLS
                     WTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPF
                     DPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTV
                     VIFMAKKIWLERQKRND"
     gene            21984..22532
                     /locus_tag="RHX79_002062"
     CDS             21984..22532
                     /locus_tag="RHX79_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDV2197233.1"
                     /translation="MGLPPLSKIPFILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLV
                     SMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITSMKVAERTGSNDKLLAVAD
                     WRQSPLFSDEERLALEYAEAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLS
                     ARFNSAMDIPAQGLCRIPEKRS"
     gene            22542..23708
                     /locus_tag="RHX79_002063"
     CDS             22542..23708
                     /locus_tag="RHX79_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV2197234.1"
                     /translation="MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDT
                     AINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGE
                     NFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
                     VTPQPPQTPQALLEFAKVNPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDA
                     TFARVTAPLWQYLDALHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKI
                     ASGDLPASSYSFGFNEGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPAV
                     WGDPSVLDPQKLPDEQREILQSRMPQDLPPVLAEPHAGWVNALEQEWLRRYGTH"
     gene            23681..25216
                     /locus_tag="RHX79_002064"
     CDS             23681..25216
                     /locus_tag="RHX79_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2197235.1"
                     /translation="MVTPLRYALIFLLWAMVAVIYAPLIPAALTLISPALSLTHWQAL
                     FADPQLPHALLATLVSTTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVA
                     FATSALLLFADGGLLYDYFPYFTPPMDRFGIGLGLTLAVKESAFLLWILAAVLSEKRL
                     LQQVIVLDSLGYSRWQCLNWLLLPSVAPALAMAMLAIVAWSLSVVDVAIILGPGNPPT
                     LAVISWQWLTQGDADQQTKGALASLLLMLLLAAYVLLSYLLWRSWRRTIPRVDGVRKP
                     ATPLLPGTTLASFLPLTGVLCVVLLAILADQSTINSEALINSLTMGLVATFIALLLLL
                     QWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLNLDRSWTAVVWGHLLWVMPWML
                     FILQPAWQRIDSRLILIAQTLSWSRAKIFFYVKCPLMLRPTLIAFAVGFSVSIAQYMP
                     TLWLGAGRFPTLTTEAVALSSGGSNGIFAAQALWQLLLPLIIFALTALVAKWVGYVRQ
                     GLR"
     gene            25216..25869
                     /locus_tag="RHX79_002065"
     CDS             25216..25869
                     /locus_tag="RHX79_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDV2197236.1"
                     /translation="MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLF
                     SWMIGALAGQFSCTGELWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALP
                     STLKGTARRNAVKDALDRAGLAETYHQDPATLSGGQRARVALLRALLAQPKALLLDEP
                     FSRLDVALRDNFRQWVFSEVRELAIPVVQVTHDLQDVPADSSVLDMEQWSENYNKLR"
     gene            25936..27243
                     /gene="ynjE"
                     /locus_tag="RHX79_002066"
     CDS             25936..27243
                     /gene="ynjE"
                     /locus_tag="RHX79_002066"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase YnjE"
                     /protein_id="HDV2197237.1"
                     /translation="MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAID
                     TRPSAFYNGWPQTLNGPSGHEPAALNLSASWLDKMSTEQLNAWIKQHNLKADALVALY
                     GNDKDVDAVKTRLQKAGFTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEV
                     TAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKH
                     GIRHDTTVILYGRDVYAGARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKV
                     KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGE
                     IAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRAS
                     ETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDSSK"
     gene            complement(27252..27872)
                     /locus_tag="RHX79_002067"
     CDS             complement(27252..27872)
                     /locus_tag="RHX79_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707357.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HDV2197238.1"
                     /translation="MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALP
                     FLALGWYLAALVVILLNRLLDGLDGALARRRGLTDAGGFLDISLDFLFYALVPFGFIL
                     AAPQQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET
                     ILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSHQRQ"
     gene            27959..28366
                     /gene="nudG"
                     /locus_tag="RHX79_002068"
     CDS             27959..28366
                     /gene="nudG"
                     /locus_tag="RHX79_002068"
                     /EC_number="3.6.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP pyrophosphohydrolase"
                     /protein_id="HDV2197239.1"
                     /translation="MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVELDES
                     QQQALVRELNEELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALV
                     WCSPEEALQYPLAPADIPLLEAFMALRAARPAD"
     gene            complement(28332..28604)
                     /locus_tag="RHX79_002069"
     CDS             complement(28332..28604)
                     /locus_tag="RHX79_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnjH family protein"
                     /protein_id="HDV2197240.1"
                     /translation="MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQP
                     CTQCCVYQDKNYSEGAVIKAEGILLQCQRDDKTLSTNPLVWRRVKP"
BASE COUNT         7090 a         7633 c         7101 g         6978 t
ORIGIN      
        1 ctttttgtta ctggtggttt gaatgaatgt agcaatgaaa tacagaattt caggtcatgt
       61 aactcccggc aaaaccggga ggtatgtaat ccttactcag tcacttcccc ttcctggcgg
      121 atctgatttg cccaacgctg ggcggattca ggcacagtaa acgccggtga gcgcagaaat
      181 gactctccca tcagtacgaa cgcaacatat ttgccacgca gcatccagac atcacgaaac
      241 gaatccatct ttatcgcatg ttctggcggc gcgggttccg tgcgtgggac atagctaata
      301 atctggcggt tttgctggcg gagcggtttc ttcattactg gcttcactaa acgcatatta
      361 aaaatcagaa aaactgtagt ttagccgatt tagcccctgt acgtcccact ttgcgtgtat
      421 ttcataacac cgtttccaga atagtctccg aagcgggatc tggctgatgg tctatagtta
      481 gagggttttt tgaccaaaac agcggccctt tcagtaataa attaaggaga cgagttcaat
      541 gtcgcaacat aacgaaaaga acccacatca gcaccagtca ccactacacg attccagcga
      601 agcgaaaccg gggatggact cactggcacc tgaggacgga tctcatcgtc cagcggctga
      661 accaacaccg ccaggtgcac aacctaccgc ccctgggagc ctgaaagccc ctgatacacg
      721 taacgaaaaa cttaattctc tggaagacgt acgcaaaggc agtgaaaatt atgcgctgac
      781 cactaatcag ggcgtgcgca tcgccgatga tcaaaactca ctgcgtgccg gtaaccgtgg
      841 tccaacgctg ctggaagatt ttattctgcg cgagaaaatc acccactttg accatgagcg
      901 catcccggaa cgtattgttc atgcacgcgg atcagcagct cacggttatt tccagccata
      961 taaaagctta agcgatatca ccaaagcgga tttcctctca gatccgaaca aaatcacccc
     1021 agtatttgtt aggttctcta ccgttcaggg tggcgctggc tctgccgata ccgtgcgtga
     1081 tatccgtggt tttgccacca agttctatac tgaagagggt atttttgacc tcgttggcaa
     1141 taacacgcca atcttcttta tccaggatgc gcataaattc cccgattttg ttcatgcggt
     1201 aaaaccagaa ccgcactggg caattccaca agggcaaagt gcccacgata ctttctggga
     1261 ttatgtttct ctgcaacctg aaactctgca caacgtgatg tgggcgatgt cggatcgcgg
     1321 catcccccgc agttaccgca ccatggaagg cttcggtatt cacaccttcc gcctgattaa
     1381 tgccgaaggg aaggcaacgt ttgtacgttt ccactggaaa ccactggcag gtaaagcctc
     1441 actcgtttgg gatgaagcac aaaaactcac cggacgtgac ccggacttcc accgccgcga
     1501 gttgtgggaa gccattgaag caggcgattt tccggaatac gaactgggct tccagttgat
     1561 tcctgaagaa gatgaattca agttcgactt cgatcttctc gatccaacca aactgatccc
     1621 ggaagaactg gtgcccgttc agcgtgtcgg caaaatggtg ctcaatcgca atccggataa
     1681 cttctttgcc gaaaacgaac aagcagcatt ccatccaggt catattgttc ctggtctgga
     1741 cttcaccaac gatccgctgt tgcagggacg tttgttctcc tataccgata cacaaatcag
     1801 tcgtcttggt gggccgaatt tccatgagat tccgattaac cgtccgacct gcccttacca
     1861 caacttccag cgtgatggca tgcatcgtat ggggatcgac actaacccgg cgaattacga
     1921 accgaactcg atcaacgata actggccgcg cgaaacaccg ccgggaccga aacgcggcgg
     1981 ttttgaatca tatcaggaac gcgtggaagg aaataaagtt cgtgagcgca gtccatcgtt
     2041 tggcgaatat tattcccatc cgcgtctgtt ctggctaagt cagacgccat tcgagcagcg
     2101 ccatattgtc gatggtttca gttttgagtt aagcaaagtc gttcgtccgt atattcgtga
     2161 gcgcgttgtt gaccagctgg cgcatattga tctcactctg gcccaggcgg tggcgaaaaa
     2221 tctcggtatc gaactgactg acgaccagct gaatatcacc ccacctccgg acgtcaacgg
     2281 tctgaaaaag gatccatcct taagtttgta cgccattcct gacggtgatg tgaaaggtcg
     2341 cgtggtagcg attttactta atgatgaagt gagatcggca gaccttctgg ccattctcaa
     2401 ggccctgaag gccaaaggcg ttcatgccaa actgctctac tcccgaatgg gtgaagtgac
     2461 tgcggatgac ggtacggtgt tgcctatagc cgctaccttt gccggtgcac cttcgctgac
     2521 ggtcgatgcg gtcattgtcc cttgcggcaa tatcgcggat atcgctgaca acggcgatgc
     2581 caactactac ctgatggaag cctacaaaca ccttaaaccg attgcgctgg cgggagacgc
     2641 gcgcaagttt aaagcaacaa tcaaggtcgc tgaccagggt gaagaaggga ttgtggaagc
     2701 tgacagcgcc gacggtagtt ttatggatga actgttaacg ctgatggcag cacaccgcgt
     2761 gtggtcacgc attcctaaga ttgacaaaat tccggcgtaa atatggataa ggtcacgtcc
     2821 cctggggagt gaccttacca ccttacttac acattaagat aactacccaa ccgataacca
     2881 cgctcagcaa ttgcatattt caacgacgct gatgtcagca cttccagctc cgttaaccgt
     2941 gggaaacagt aagcactctg acggatagta ttatcgataa acgcaggatg acacatcacc
     3001 tccagcgaaa gatcaccccg atggcttgcg tcatccagca cttgcaggaa cagtgcctcg
     3061 ctaatctctt caccataaaa cgcgctactg aatccctgag aactgcgcag attagccggt
     3121 aaatcaccag agttagatag cggctgacgg tcgatgcgca acgcaatccc ctcttcagcc
     3181 gcaaacctga caacaatcgg gaaaatctgc gggaacatat gcacatgatg atggctatca
     3241 agatgcgtag gtttgcgtcc aaatagctca atgaaacgca aatactgact ggcaagctcc
     3301 tgagtaattt cttccagcgg taaagcatct tcttctgcca actgccagat ccattttccc
     3361 agcacaccat cgcgggttaa ccccggcata gctgtcagtg gcttgcccat agtaaggaca
     3421 aagtgcatcc ctatggccag actcggttca tcacgactca actgcaccgc atggtcaata
     3481 gcctgcccat tcaccagcgc cgtcgttgat gtgacaatcc cattgcgaca ggcctcgata
     3541 atgccgtagt tctgaccttt gcttaagcca aaatcatcgg cattaacaat cagtaagcgt
     3601 tccataatca gcctcggtta atgtgctttt ttaagctctg cgatgcagtc ggcaaaattt
     3661 ggcagccatt tctcgtgcgc cagaatcatc tcgcgtgcca gcagctcagc atcgcgatcg
     3721 gaatgcacca acggactaag gtttagcgcc agtaacacat cgttaaattc tccgctaagt
     3781 gcggcgttgc tggcagcaat ctcgaagcct ttaatggtgt gaatcagccc catcacttta
     3841 tcatcgaaat gcgtaatgcg cggatgtggc gtcgcgccat cgcgccccag cttacaggtc
     3901 atttctaccg cccagtctgc cggaatatta tcaatatgcc catgatgcgg gatattaacg
     3961 taatgttcag cttgcttgtc gttgtagata gcgttgatca cttcgcacgc tgcatcagag
     4021 taataagccc caccgcgctg ttccagttct ttcggcttaa ctttcaactc cggattttta
     4081 tacagctcaa aaagttgttt ctcgactttc tgtactacct gtgctcgtgc gccgcctttg
     4141 tagtattcgc ccatttcaat agccagcatc tctttctgct tgaagtaata cagcagataa
     4201 gaacatggca gcagatttaa cgaacgaatt aagccctcac taaatggcag atcgaaaata
     4261 ttttttacag aggacgcttt taactgccct gacgccacac catcaagcaa ttcggcaaag
     4321 cgcgacttgc catttaccag cacatcctta atgaacacca tatggttgag gccgaacaga
     4381 tcgatagata aatcatcgct gtctttcagc atcagaacat cgcgaataaa catcttcatg
     4441 ccgatcggaa tattacacac gccgataaag cgtttaaatc cggtatgacg ataaacggct
     4501 tcagtgacca ttcccgccgg gttagtgaag ttaatcaccc atgcattcgg acaaagttct
     4561 tcgacatctt ttacgatgtc aaaaatcacc ggaatggtac gcagaccttt aaacagaccg
     4621 cccgcgccgt tggtttcctg accaagataa ccatgactta atggaatacg ttcatccagt
     4681 tcgcgcgccg gtaattggcc tacgcgcagt tgggtagtaa cgaaatcagc atctttcaat
     4741 gcttcgcggc gatccagcgt tttataaagc ttcatcggga cgccagcgtt atcaatcatc
     4801 cgttggcaga gttcaaaaat gatatccagt ttctctttac catcttcgac atccaccagc
     4861 cataattcgc tgaccggcaa ttcgtgataa cgcttaataa atccttccag taactccggg
     4921 gtatagctgc tcccgccacc aatagtgacg acttttaatt tctggctcat aatttctccc
     4981 ttcagtacag aatactgata tctggcatat ctgccccccc ggacataaat aatccagcaa
     5041 caggacagat atgtgaattg tcaggtataa cgacttactg attaaattca gtcaatttct
     5101 tacgatagct cttaggcgta aaggacgtta atttcttaaa cgttttaata aacaaactcg
     5161 ggctactata accggcctca aacgcaatat ccgtcacgga atagttggtc atttccagtt
     5221 gttttttggc aaaattaata cggatctcat taataatctg cattggtgtt ttgccataat
     5281 atcgttgagt cgctcgcgtc aaatattcct gtgatttggc tgacaacgtc accatattct
     5341 ccagcgccga ttcactaaac tgctctttat catgcatctt ttctaccgta cttttcagcc
     5401 actgcggtac atcatcaatc acctgttctt cgcggtaatg acgtaaacgg ttaatgacat
     5461 aaaaagtaac catctcaaca aactcttcca gccctgtttc gcggaaattc aatgaagaaa
     5521 tcactgtttc cacataggtg agaaaagcgt tattggtccg gtatacctgc gaagcgacaa
     5581 agcaataagg caacaacggc aggtaatgct gctcaaaaaa gcgtttactg atcccaacgt
     5641 tcaatatacg cgtggcacca aactcataaa aactttgatg gtgcgaacct aacggaataa
     5701 aaacaaaatc gccccgttcc agtaacacgc gcttaccgtt aatctcctgg aaataacgcc
     5761 cggttaatac cagagtaaat tcataatagt cgtgctgatg cagcccgctg atactctcag
     5821 ttttgttata gataaacaca tggaagtttt tgccattaaa caactgctgt tctcgggcag
     5881 tggcaatttc cggcgcgtta atcactggct gcatcatcga ctccttatgc cttcagtttt
     5941 tcatgaagct caattaattc agtaatcagt tcacgcgcaa gcatggacgt cattaaatga
     6001 tcctgagcgt ggaccagcac cagactcact ttcatcttac cttcgcccgc atcgccttca
     6061 atcagtttcg tctgtaccag atgcgcttca ttcaatgcca tccgtgactg atccatcatg
     6121 gcttttgctg cagcaaaatc gccctgcttc gcctgtttca gtgccgcata cgccaggctg
     6181 cgcgcttgtc cggagttgat gataagcccc atcaccactt cttccagctc ttcagcttcc
     6241 gtttgcgtat cgggaatgtt atcgagatcc atcatacatc gttcctctct attcttaccg
     6301 gcacgattac ccgtaccggc atcgattaaa atttcagggc gttagcgata tcttcttcgc
     6361 tctcttcttt atcaatcgcg ttttgtgctt tgttagccac cacaacaaag ggcagataaa
     6421 ttaacgttgc gataccaagg ttgaagagtg cgaccagcaa tgcggcgacg ctaccgttgg
     6481 tgttaaagaa ggctcccaga ccggttggca tggtccacgg tgcaatattg gtcaccggag
     6541 gaatgatgcc catgtagtac gctgcgaggg tgattgccgc cagaatcggt tgtaccagta
     6601 caaacgggat aaacatcacc gggttcatga taattggcag accaaacaga atcggttcgt
     6661 taatctggaa gatgccggac ggcagcgcca gttttgccac ctgacgataa tcagcacggc
     6721 gagaggcgat aaagatagcc aggatcaggc ctaaagtcgc accactgccc ccaaggaaaa
     6781 taaaggagtc cagcatcggc ttggcccaga tatggaaggt cttaccggct gccagcgccg
     6841 cttcgacgga accatattgc tgataggtcg cgatattttc cagcgcccac ggcgtcataa
     6901 tgccgttgtc cagtgcggtc agcgccagcg cgccatgaat accgaagaac cagagcagtg
     6961 gaacaaagat cacataggcc cagcccacca cgctacccaa cgatgccagt ggggttgaga
     7021 tggtatccat aatgatctga tggaagttgg tgccccaggt attcaacgcc caggcaataa
     7081 tccccatcac ggaaagaata ataaagccgg gaattaatgc cgagaaggaa cgcgatactg
     7141 aagcaggtac gctatcgggc aatttaatga cccaattgcg gcggacaata aaggtaaaca
     7201 tttctgccac caccaggcca ataataatcc cggagatgat attcgctcca cctaaccagt
     7261 ttgcgccaac cgcataggcc tcaccgacac tatatggggt gacggtcata aatgctgcaa
     7321 cggataacaa cccagccgcc agcgcatcga ctttacgctc ttctgccagc gccatgccaa
     7381 taaagaacgg tgccattaaa gacattatcc ctaatgttcc gttatatacg ttgccgccaa
     7441 tacctttcag gccattaagt gtttcaatgg ttgaggcatc taggcgaata cctaaggaat
     7501 aaaaaaatga cccctcccca aagcttagaa aaacgttgtt aattaataca aacatggccc
     7561 ccgcaagggt taacggcatt aagcgaataa agccattttt gattgcatta acgtgtggct
     7621 gctttcctat tttaactgca aaagggagga gtaccttttc aagcgatgca ataacattac
     7681 tcatagaaaa atacccttaa aaaccgcaac ttaaatattg cggtattgat ttatgaaata
     7741 actctttgac gggaaaattt aaaataaatt aatttgctgc ggctttttta atcgctgcaa
     7801 ccgcagcctt aagcacgcct aaaccatcga ctttgccata aagcagcgag tcaattactt
     7861 caaccggttt gttgggtaac aaacgctgga tttcgggcaa catataagca atctgcggcc
     7921 ctaataacac gacatcggca ttctgacctt tttcaccagc cagtgtttcc ggaaatgctt
     7981 caataatgac cggaacttca tatttttctg cctgtgcgcg catttttgat accagtaaag
     8041 aggtagacat gcccgcagaa caaaacagat aaatgtgttt cttttccata aaactgccct
     8101 catcgacgat tatctgtcag ccagacactc cgcaagcctt aacctgcttc catgctctgg
     8161 gtaacttgcg aaaccaacat gacttttttt gtggctgaaa ggagtatacg gtatagacct
     8221 gagcaatagt atttctttga ccttataaat tgtttctcct tgacctgtgg ttatgaccct
     8281 cttcacattt cgggcaaata attcgcgaag ataattaaga actcaggcca aaaaaaaccg
     8341 gcgcaatggc cggtttccgt tgttactcaa gctttcagac gaattgatta cttcgcagcc
     8401 tgtggatcag tgtcgtattc agcacaggtc tgataaccgg agttgatgac atgtccggta
     8461 tcatctaacg cgacaaagta ggtttctgct ttaccatcac gttgacccag gatgtaggtc
     8521 tggcaagtac cgcgagcatg gatcatgctc acttcagacg aaggtttacc cgcaatttgt
     8581 gcaacctgcg cccggctcat gccttttttg acgtctttca ccacaggctg tacaaactgg
     8641 tctttggtac gatcataagc cgtacaaccc gccagcatgg ttaataccgc cgctgcactc
     8701 agaattcctg ccatattctt gttcatattc cgtcctcttg tttatcagcg tgttagataa
     8761 gcctggaata cattgggcgc tttttcaagc ccgtgaacga aacggctccg ctttcagagg
     8821 attcctgtat gacgttttaa ccaccattca gcccgctgtc gcttgtcgtt tcagtagcaa
     8881 cgggttagct ttaaggaagt tttgtctttt ctgtctggag gggttcaatg acattgcaac
     8941 aacaaataat aaaggcgctg ggcgcaaaac cgcagattaa tgctgaagag gaaattcgtc
     9001 gtagtatcga ttttctgaaa agctacctgc aaacttatcc gttcattaaa tcactggtgc
     9061 tcgggatcag cggcggtcag gactccacgc ttgccggaaa gctgtgccag atggcgatta
     9121 atgagctgcg cctggaaacc ggcaacgaat cactgcaatt tattgccgta cgcctgccct
     9181 atggtgttca ggccgacgaa caagattgcc aggatgccat tgcctttatt caaccggatc
     9241 gcgtattaac cgttaatatc aagggcgcgg tattggccag cgaacaggca ttgcgggaag
     9301 caggcattga actgagcgat tttgtccgtg gcaatgaaaa agcgcgtgag cggatgaaag
     9361 cacaatatag cattgcgggt atgaccagcg gtgtcgtggt gggcaccgat catgcagcag
     9421 aagccattac cggattcttc actaaatatg gtgacggcgg tacagacatt aatccgctgt
     9481 atcgtctcaa caaacgtcag ggtaaacagt tactggcggc attaggttgc ccggaacacc
     9541 tttataagaa agcgccaacg gccgatctgg aagatgatcg cccttctctg ccagatgaag
     9601 tggcactcgg cgtgacctat gacaatatcg acgactatct ggaagggaaa aacgtacctg
     9661 aacaggtcgc cagaacaata gagaactggt atctgaaaac cgaacataaa cgccgtccgc
     9721 caattaccgt tttcgatgat ttctggaaaa agtaataatt tgcacataat ggtttgtgcg
     9781 aaaaagagta atttgttcac gccggatgcg gcgtgaacgc cttattcgac ctacaaaact
     9841 atgcaaattc aatatattgc aggagtcgaa taggcctgac aggcgtagca cgtcagacgg
     9901 tgtaaccttt gtcatcgacc cgcctctttt ttaatcgctt cccgcctgtt acactggata
     9961 gataaccagc attcggagtc aacagtggta cggcgtttaa cttctccgcg gctcgaattt
    10021 gaagctgcgg caatttatga atatcccgaa catttacgtt cattccttaa tgacttaccc
    10081 acccgaccag gggtgtatct gtttcatggc gaaagtgaca ccatgccgct ctatatcggc
    10141 aaaagcatta acatccgcag ccgcgtcctt tctcatttac gtaccccgga tgaagccgcc
    10201 atgctacggc aatcccgacg catcagctgg atctgcaccg caggcgaaat cggcgctctg
    10261 ctccttgaag cgcgattaat caaagaacaa cagccgctgt ttaataaacg gttgcgccgc
    10321 aatcgccagc tctgcgccct gcaattaaat gaaaagcgcg tcgatgtggt gtatgccaaa
    10381 gaggtggatt tttcacgagc ccccaacctg tttggcctgt ttgccaatag gcgcgcagct
    10441 ttgcaagcat tgcagagcat cgctgatgaa caaaaacttt gttatggcct gttgggactg
    10501 gaaccgttaa gtcgcggtcg tgcatgtttt cgttcagcgc taaaacgttg cgccggagca
    10561 tgctgcggta aagagagcca tgaggaacat gcgctacgct tgcgccagtc tctggagcgt
    10621 ttgcgggtgg tgtgttggcc ttggcaaggg gcggtggcgc tgaaagaaca gcacccggaa
    10681 atgactcaat atcatattat tcaaaactgg ctgtggctgg gggcggttaa ttcgctggaa
    10741 gacgcgacaa cgttaattcg gacacccgcc gggtttgatc acgacggtta taaaattctt
    10801 tgtaagccgc tgctttccgg taactatgaa attactgaac ttgatccggc gaatgaccag
    10861 cgagccagtt gatttcactg aacaacagtt taccttgcgg ttgtaaaagc cgcagggtgt
    10921 gcctgccatc gaaccagcac gcgccctggt cggtagtgag caatttatcg cccagttgcc
    10981 acgccccgtt aatcacaaac accaccccgc cgcgtgagcc aaaggtagta aacgtacgtt
    11041 cggcaattct gactttcgcc ttacagacat ccaggcgtgt catgatgttg aaatccatcg
    11101 acatctgccc tgccgtcagt ttcgctttta ccacctggtc cgccgcaaag gcaaaaggct
    11161 gtaacggttt taaggtatgg ttaaagcggt ctgcgctttc aaggaacatc tcgccgcctt
    11221 ccagcaacgt cactatcctt tccatgccgg gaaacaaaga aaactcccca ttcgccgcga
    11281 tggatgcaat gctggcacgc cagtaaaaat cacgttttgc cggtgggaaa gtgcaaattt
    11341 cgcgcgtttc accggcagcg tttcgccaca gattcaccga cattttacgc atatcaaagt
    11401 attccatact cgctcccggc ccgttctttt cattgttatc gttcaggtaa ccgtggatgg
    11461 ttatcggcaa ctcgggtgat ttacgttagt ggtgatcagg ctttttttac aactgtttga
    11521 gaagagaaaa gaaaaccgcc gatcctgtcc accgcattac tgcaaggtag tggacaagac
    11581 cggcggtctt aagttttttg gctgaaagat tattcagcag ttgcaggcat tttacctttt
    11641 gccgctggac gttctgtcag acgcttctca aaattagcat taaattgctt tttctgttcc
    11701 ggcgtcagga tgttgtaaat tttgttctgg gtttccatgt gcgccagcat gttagctttg
    11761 cgctgttctt ccatttttgc gatctgcgct tcagcttttg ctttatcgaa ggtatcgctg
    11821 gcaatgatgt catgcattgc gcggcgttct tccagcggcg gacgtttcat ctggtcacgc
    11881 tggcctttca tgatttcgcg gatctgctgt ttctgcgcgt cggtcaggtt caggtctttg
    11941 aacatcatgt cctgatgcgg accgaacttg cctttgtggt gcatcatcgg cttcgcgtca
    12001 gccggtgctg cggtagtggt gtctgcggca tgggccaggt tagccgcgcc aagagccagg
    12061 gtagaggcaa caaacagtgc agttaattta cgcatattct atatccttcc tttcagttat
    12121 ttattacggc tttcttaagt agcgtgccgt gttgacgaga ttaactttac tgactttagc
    12181 gtcaattaat cagagcaacg gtaaaacaat gaaagtgtaa aaaacacttt tgcgccaatt
    12241 atggagaaaa aaagaaaatt tgatggagag tgatgagaga atattacaac acgatgattt
    12301 tgcagagatt atgaagaact ataccggatg actggtgata aataaagcaa ataaccagga
    12361 ttaatctgta ttaatttata agaaagcaac ttaatacccg cagaatgatt tctgcgggta
    12421 agtattagct tattttttcg agcattaatc ccgcgcgtaa tcccaacgct accaacggat
    12481 tagggaataa cacatactct acatcatggg ttacggtaaa acgttcctct ccgtcctgcg
    12541 ccagcaatgt tcctttctca aacggcataa aattcagcgt gtcacttgcc atatgcattt
    12601 cgaaggacgg cgagtggcga gtaatttgcg aaaccacccg ataacggagc ggcggtgttc
    12661 tcacgatacc gacactctca ccagatagca gcgcagcaat tgcgctggca gttactgcaa
    12721 actggcgaag atcgttttgc ccaaagggca acgctttgcc aagttccagc gtacaggcca
    12781 gcgcgccaaa atgtctggcg ctgaaatggg taaacgtacc accaggttcc tgatggaaca
    12841 ccagcgcctc cagccccgcc gcacccagcc acgtcagaaa tttctcgtcc cagggaatgt
    12901 cgcgttgcgg taatacaccg aactgcggat gcaaggagcc acgaattgcg gtatgtagat
    12961 caaggtgcca gcgcacagat tctttgccct ggtcataaaa atcttccagg cactgttcca
    13021 gttcgcgcgc ccgacaggtt tctccgcttt cagcaaatag ctgccaacga ccgccaaaca
    13081 ttcgattcat atcgctatgg caataacgtt tcccttgctt cagcgcagga ggattcccga
    13141 ggatcaccag caaccgccaa cgtaacggga tctcgccgtg agatatcgcg ccaagcaacg
    13201 cgtccagcat ctccacaggt gccgtctcat taccgtgtat tcccgctgaa atcaccagtg
    13261 cgccttgcgg tggcgttaat ggcgtcagtt ccagcacacc atcgcccagc cagcgccagc
    13321 gaacgccgtt gatttctcgc tcggtgataa ccggtttttt acccgttaag gtcagagcaa
    13381 gaaaattatc cattgccccc tccctcgcgc tggaacggat aaaccgaacc gagattcagt
    13441 aattggctca atacatccag tgcttcccgc ccttcgcgca gcaattgcgg gtcggccaga
    13501 tcggcagcag taaggcgatc gcggtagtaa cgatccaccc agtcattgag cgcattaaac
    13561 agcgtatcgt tcatcatcac cgccggattc accgcccggc gttcttcttc tgtcaatacc
    13621 acccgcaacc gcaggcacgc cgggccgccg ccattcgcca tgctttcacg taaatcaaag
    13681 acttttagtt cgctaatcgg gttgtcagcg gcaaggagtt cattgagata accccatact
    13741 ccggcgtgtt cccgacactc ctgaggcagc accaacatca tggaaccatc atcgcggctc
    13801 aacagttggc tgttaaacag ataggtagac accgcatccg acacggaaac ctgagttgcc
    13861 ggaacttcta tcgccataaa accgttcacc cgcgcacgca ggtttgccag taactgtgac
    13921 tggcgagcga acgcctgttg gtggcaaaac agcacctggc ggttactcac ggcaatcacg
    13981 tcattatgaa aaacgccctg gtcgataacg tccgggtttt gctgggcgaa aatcacctgt
    14041 tggggattca cctgattcag ccttgccacc gcctcgctgg cttcgcgagt ctgtcgcgcc
    14101 ggataacggg aaggccgggt atcattgcct tcttctcgcc cgtagacaaa aagttgcata
    14161 cccggctcac cgtaatgacc gccgagacga ttgtggtttg ccgccccctc atcaccgagc
    14221 aacgctacct gcggcaacgc cgaatgaacg ctaaatttct cttcgtcgtt aaaaatcgct
    14281 tttaaaagtg attcggtgac gtgcgcttcc agcgagcggt gaaatttatt gttcaggttg
    14341 gcaacggtga gatgcacttt gccatccagc gtatcggcag atggcgcgat cgttgccgca
    14401 ttggctaccc acattggcga agcggaactg acgctggaaa gccagtgcgg tgcctggcgt
    14461 gcaacttttt ccagtacctg ctcatcgcta ccactgaatc ccaactgacg cagcaccgga
    14521 ataaacggac gctcgtgcgg cgggatcacg gcctggggga atcccgcatc ggcaagggct
    14581 ttcattttca gtaagccctg ttttgccgcc tgtcgcgggt tagacacctg aaaacggtga
    14641 cgggtagagg cttcattacc aaacgacagg ccagcgtaat gatgcgtcag ccctaccagc
    14701 ccgtcgaaat taacttccca ggcgttcatc gcaccacctc atcggaaaaa tccagcccgg
    14761 ggttaagcgt tgcgggcaaa gttaacgagt ccgactccag gctcgccata ggccatgcgc
    14821 agtaatctgc ggcataccag gcgctggggc gatggttacc ggatgcacca atgccgccga
    14881 atggcgcggt actggcagca ccagtaagcg gtttgttcca gttaacaatc cccgcccgcg
    14941 cctccagcaa cagttgatcg aatttttccc gctcggggga aaccagaccg caagagagtc
    15001 cgaagcgagt gttattcgcc attagaatcg cttcctcgaa agaatcataa cgccagacgc
    15061 gcaataacgg tccgaacacc tcttcatctg gtacgccagc aacgcctgtc atttcaatga
    15121 tccccggcgt cagcaacgat gtctctgatt gtaataagcg cggcgcaagc agggttcgtc
    15181 cgcccatcgc ttccagttgc tgccaggcag taaccacctg ctgtgcggcc tgttcagaaa
    15241 tcagcccgcc aataaacggc tgcggttcgt catcccagtt gcccggcgtt aatcgctggc
    15301 tgacggcaac cagacgagca agaaacgcat cgccctgcgc tccgcttttg agcaataaac
    15361 ggcgggcgca ggtgcagcgt tgcccggctg tgacaaacgc cgactgaatg gtcagatgga
    15421 cagccgcgtc gatatccgcc acctcatcga taattagcgg attattaccg cccatctcaa
    15481 gggcgagaat tttctccggc tgaccggaga gctggcgatg cagctggtag ccggtattgg
    15541 cgctaccggt aaacagcaaa ccgtcgagat cctccagcgc actcagcgcc tgacccgttt
    15601 cacgcccgcc ctgcaccagg ttcagtacgc ccggcggcaa gccagcctgc tgccataaac
    15661 gcattaccgc ttcgccactc cacggtgtca gttcgctggg tttaaagata atggtgttac
    15721 ctgccaacaa tgccggaacg atatgtccgt tcggcaaatg accagggaaa ttatacggcc
    15781 caaacaccgc cagcacgccg tgcgggcgat gtcgcaggct cgccgcaccg tccggcattt
    15841 cacaacgttg ctcgccggta cgaacgtgat acgccttaat tgatatcgcg attttattga
    15901 tcatcgccgt cacttcggtt gccgcttccc agcgcggctt acccgtttct ctggcaataa
    15961 tcgcggttaa ttcgccttta ttcctttcca gcaatccggc aaagcgttcg acaacgacct
    16021 gacgttcagc caatgagagc cgcgcccagc gcggaaacgc cgcacgggct gcgcgacaag
    16081 cctgcccgac ctgagcggca tcggcatcat tgccttgcca taacacctcg cccgataccg
    16141 gattacgctt cacacgcgat gcgccctggc ccgttatcca gtcaccgtta atccataaag
    16201 tcatgctgtt ttctcctctg cgcacaggcg caccagacga acgcgatccc ctgcgtggca
    16261 tttgagggca tccagttgtg cggcggttaa aatcaaacgc tcggttgccg gatcggtacg
    16321 cgccagcacc acgcggaaat ggtgataatt ttcattggcg accaggcagg ccggaaaatc
    16381 gccctgcgca ggctgccctt ctgccacttc caccagccga cttttacgaa tggcgcgcac
    16441 gcggtcgatg tcacactcaa gcgttggccc gccgtcgaag atgtcgatat agttgcggta
    16501 acgaaaacct tctttctcca gcaccgcgcg ggcaggcgcg gtttgcggat gtacctgacc
    16561 gatgacgtcc tgggcttcct gggataaaaa gtgggtatag atcggatgtt tcggcatcag
    16621 ttctgcaata aatgcctttt gcccggtgcc gcagagaaaa tcggcgcggc taaaatccat
    16681 cgaaaagaag cgtttaccga ggctttgcca gaacggtgaa tagccgtgtt cgtcaatcac
    16741 cccgcgcatt tcagcaacca ctttgtcatt aaacttgtcg cgaaaagccg ccataaacat
    16801 aaagcgcgat ttcgacagca aatagccgtt gccctctttg cgccagtccg ggtcgagaaa
    16861 cagcgtgcac agctcgctgc tgccggtgtg atcgttactg agaaacagcg tcggcaatgc
    16921 gttatagaca ttcagctctt ttgaggcgtg aaccaacgtg ccgacgcgat agttgtacca
    16981 gggatcgttc agcccaaccg ccacctcaat ggcacaaatc cccgccacgg tgcctgtctc
    17041 gctatcttcc agcacgaaca catagccctg ctcacttttg ggcagttcgc cttgccaggt
    17101 tttgattgcc ctttcgatac gcgccgaaag cgtggcttca ttggcgggaa gcgacgtcag
    17161 gccgccgccc gttttgctgg caagctgcat cagcgccgag acatctgatc gctcaacggg
    17221 acggatgacc atcatgatga acctcggcta acaaagtgtt cgcaagcagc tgcaaagcga
    17281 tccagtccgg tcgtcacctc ttcttcgctg acattgagcg caggcgcaaa acgcaccacg
    17341 ttgccacccg caatcagtac catcacgcct gctttcgccg cttcctgaga gatctgtttc
    17401 gcttgcccgg cgtaatcggc attcagtaca cagccaatca gcaaacctaa gccgcgaact
    17461 tcactgaaca aaccatagcg gtgattaata gtattaagac gctcaacaaa ccagtcgtga
    17521 cgctgtttaa cgccattaag catctctggt gtgttgatga gctccagcac tttgcctgcc
    17581 accgccgagg ccagcggatt accgccatag gtggtgccat gagtgccaac ggtcatcacg
    17641 cgggcgcact cttcggttgc caacaacgca ccgaccggaa aaccgccgcc cagcgctttg
    17701 gcggtagtta acagatcagg cgtcacgccg tagtgcatat aggcatacag ttccccggtg
    17761 cgcccgacgc cggtttgtac ttcatcaaaa atcaacagcg cattgtggcg gttacacaat
    17821 tcacgcagac cttgtaaaaa cgcgttgctg gctggcacca caccgccttc cccctggatg
    17881 ggttcgacaa tcaccgcaca ggtagagtcg tcaatcagcg cgctggcaga gttaatatcg
    17941 ttatatgcag catgacgaat atccgccggc agtggcgcaa aatcctgtga ataggctggc
    18001 tgcccacccg cactgacagt aaacagcgtg cgaccatgaa acgcattttt gaacgccacg
    18061 atgccgctct tatggctgcc gtagcggtcg tgagcgaatt tacgcgccag ttttagcgcc
    18121 gcttcgttgg cttccgcacc ggagttacaa aagaagacgc gatcggcaaa cgtggcgtcg
    18181 atcaattttt tcgccagtcg cagtaccggc tcgttggtgt aaccgttgcc ggtatgccag
    18241 aacttactcg cctgttcgtt cagcgcttca cgcagttccg gatgcgcatg gcccagcgcg
    18301 ttcaccgcaa tgccacccgc gaagtcgata tactctttcc cctgctgatc ccacaagcgc
    18361 gaaccttcgc cacgtaccgg tataaagggt gccggagcgt aaacaggtat catccattca
    18421 ttaaagtttt cacgcgtaat tggctgagac atagcgacct ctacagtaaa taattcgtta
    18481 tttatatgtt aacaataagt aatgtttgcg ctgtaaatgt agattgcagg gttcgtgcca
    18541 gccagtgata aaagtgcata aacggcggag gctaactgga aatcaaggag ttataaccaa
    18601 accatatgca tttaaagtgc atataaagtg aatacgtttg cgatgtgggt gaataaaaag
    18661 aataaaaaac gcaatgttat gcagaagtaa aatataattc tggaattgtg atcattgacg
    18721 aaatttactg gaaattactg cgccattctg acgcagcgcg caccaaaagc gggcattttt
    18781 gcgccatcgt tgacatcatt aacaaccatc gatcaaatca cttaacaaca ggcggtaagc
    18841 aacgcgaaat tctgctacca tccacgcact ctttatctga ataaatggca gcgactatga
    18901 aatttgtctc ttttaatatc aacggcctgc gcgccagacc tcaccagctt gaagccatcg
    18961 tcgaaaagca ccaaccggat gtgattggcc tgcaggagac aaaagttcat gacgatatgt
    19021 ttccgctcga agaggtggcg aagctcggct acaacgtgtt ttatcacggg cagaaaggcc
    19081 attatggcgt ggcgctgctg accaaagaga cgccgattgc cgtgcgtcgc ggttttcccg
    19141 gtgacgacga agaagcgcag cggcgaatta ttatggcgga aatcccctcg ccgctgggca
    19201 atgtcaccgt gatcaacggt tacttcccgc agggtgaaag ccgcgaccat ccgataaaat
    19261 tcccggcaaa ggcgcagttt tatcagaatc tgcaaaacta tctggaaacc gaactcaaac
    19321 gtgataatcc ggtactgatt atgggcgata tgaatatcag ccctacagat ctggatatcg
    19381 gcattggcga agaaaaccgt aagcgctggc tgcgtaccgg taaatgctct ttcctgccgg
    19441 aagagcgcga atggatggac aggctgatga gctgggggtt ggtcgatacc ttccgccatg
    19501 cgaatccaca aacagcagat cgtttctcat ggtttgatta ccgctcaaaa ggttttgacg
    19561 ataaccgtgg tctgcgcatc gacctgctgc tcgccagcca accgctggca gaatgttgtg
    19621 tagaaaccgg catcgactat gaaattcgca gcatggaaaa accgtccgat cacgcccccg
    19681 tctgggcgac cttccgccgc taatttagca gctctcctgg ctcaaactgg gtcaggagaa
    19741 ttaaccttga gaaaaatcaa caaactgtca gtaatgattt gttgcctgcc gtcctttgtt
    19801 ataccgtcac tgcgttttta gttgtctgac cacttctcta ttatcaagtt tgatatagga
    19861 aactccacga tgaacgctga gcgtaaattt cttttggcct gtcttatttt tgcgctggtc
    19921 atttacgcta tccacacttt cggtttattc gatctgctca ccgatttacc ccacttacag
    19981 acactcatcc gccagagcgg attgttcggt tatagcctct atattctgtt attcattatt
    20041 gccactctct ttctgttacc aggaagcata ctggtgatcg ctggaggaat agtttttggc
    20101 ccgctcttag ggacactact ctcattaatt gccgccacgc tcgcctcctc gtgctcattc
    20161 ctgctggcgc gctggctggg acgtgattta ctgctgaaat acgttggtca tagccatacc
    20221 tttcaggcca ttgaaaaagg cattgcgcgt aacggtattg attttcttat tctgacccgc
    20281 ttaatcccgt tgtttcctta caatattcaa aattacgctt acggattaac cacaatcacc
    20341 ttctggcctt atacccttat ttcggcactc acgaccctgc ccggtattgt tatttatacc
    20401 gtgatggcaa gcgatctcgc caatgaaggc attacgctgc gctttatttt acaactctgt
    20461 ctggcgggcc tggcgctgtt tattctcgtc cagctcgcaa aactctacgc ccgacacaaa
    20521 catgtggatc tgtctgcttc gcgccgcagc ccacttactc acccaaaaaa tgaaggatag
    20581 aacgatgtcg caacattatt cagtgtcatg gaaaaaagga ctggctgcac tctgcttact
    20641 ggctgttgcc gggcttagcg gctgcgatca aaaagagaat gcggcggcaa aagtggaata
    20701 cgacggactt tcgaacagcc aaccgctgcg tgtcgatgcc aataaccata cggtaaccat
    20761 gctggtgcaa attaatggtc gtttcctcac cgatgacact cgtcacggta ttgtgtttaa
    20821 agatggctcc aacggacata aatcgctgtt tatgggttat gcaaccccga aagcatttta
    20881 tgaagccctg aaagaggcag gtggtacgcc gggcgaaaac atgacgatgg ataataaaga
    20941 aacgactcat gtcacaggta gcaaactgga tatttcggtc aactggcaag gggcggcaaa
    21001 agcgtattcc ttcgatgaag tgattgttga cagtaatggc aagaaactgg acatgcgctt
    21061 tggcggtaat ttaacggcag cagaagagaa gaaaacgggt tgcctggtgt gtctggatag
    21121 ctgcccggtc ggcatcgtca gcaatgcaac atacacttat ggtgcggtgg aaaaacgcgg
    21181 cgaagtgaaa ttcaaaggca atgcctcagt tctcccggcg gataacacgc tggcaacggt
    21241 tacctttaaa atcaccgaat aaagccagga taaaggatga tgaagataca atcgcgtaaa
    21301 atctggtact accgtataac cctcatcatc ctgttgttcg ctatgctgct cgcatgggcg
    21361 ctgcttcccg gcgtccatga gtttatcaat cgcagcgttg cggcgtttgc cgccgtggac
    21421 caacagggta tagaacgctt tattcagtct tacggcgcac tggcggcagt tgtctcgttc
    21481 ttgttgatga ttttacaggc cattgctgca ccgctacctg cgtttttgat cacctttgcc
    21541 aatgcgtcgc tgtttggcgc gttctggggc ggcttgctgt cgtggaccag ttcgatggcc
    21601 ggcgcggcgc tgtgcttttt tatcgccaga gtgatgggcc gcgaagtggt ggaaaaatta
    21661 accggcaaaa ccgtgcttga cagtatggac ggctttttca ctcgctacgg caaacacacc
    21721 atcctggtct gtcggttatt gccttttgtc cctttcgatc caatcagcta tgctgccggt
    21781 ctgacttcaa tacgttttcg ctcgtttttt atcgccaccg ggcttggtca attaccggcg
    21841 actattgttt attcctgggc gggcagcatg ttaacaggcg gtactttctg gtttgtcacc
    21901 ggactgttta ttctgtttgc cctgaccgtg gtgattttta tggcgaagaa aatatggctt
    21961 gagcgccaga agaggaatga ctgatgggtt taccgccgct tagcaaaatt cctttcattt
    22021 tacgtccgca ggcgtggctg catcgtcgcc attacggcga ggtgctaagc ccgattcgct
    22081 ggtgggggcg gatcccgttt atcttttatt tggtgtcaat gtttgttggg tggctggagc
    22141 gcaaacgctc accgctcgat ccggtagtgc gatcgcttgt cagcgcgcgc attgcgcaaa
    22201 tgtgcctgtg tgagttttgc gtggatatca ccagtatgaa agtcgccgag cgtaccggca
    22261 gcaacgataa actgctggca gtggctgact ggcggcaaag cccgctcttt agcgatgaag
    22321 aacggctggc gctggagtac gccgaagccg caagcgtcac accgccaaca gtcgatgatg
    22381 ccctgcgtac ccgactggct gcgcattttg acgctcaggc gctcaccgaa ctgacggcat
    22441 tgatcggcct gcaaaacctg tcggctcgtt ttaattctgc catggacatt cccgctcagg
    22501 ggctgtgccg tattccggaa aaacgttctt aaggagggaa gatgcgccat tgtgggtggt
    22561 tgctgggatt gttatcgctg ttttctttgg caacacatgc cagtgactgg caggaaatta
    22621 aaaatgaggc caaagggcaa accgtctggt ttaacgcctg gggcggcgat accgcaatta
    22681 accgctatct cgactgggtt agcggcgaga tgaaaaccca ttacgctata aacctgaaga
    22741 ttgttcgtct cgcggatgcc gcagacgcgg tgaagcgcat tcagaccgaa gctgctgccg
    22801 gacgtaaaac gggcggctcg gtggatctgc tctgggtgaa cggcgaaaac ttccgcacct
    22861 taaaagaggc caatttatta caaacgggct gggcggagac tctgcccaac tggcgctatg
    22921 tcgacacaca gctgccggtg cgggaagatt tttcagtgcc gacacaaggt gcggaatcgc
    22981 cctggggcgg cgcacaactg acgtttatcg cccgccgcga tgttacgcca cagccaccac
    23041 aaacgccgca agccttactg gagtttgcta aagtcaatcc cggcacggtt acctatccgc
    23101 gcccaccgga ctttaccggc acggcgtttc ttgaacagtt gctgattatg ctgacgcccg
    23161 atcccgccgc attaaaagaa gcgccggacg atgcgacttt cgcccgtgtc actgctccct
    23221 tgtggcaata tcttgatgcg ctgcatccgt atttgtggcg cgaaggaaag gatttcccgc
    23281 cttcgcccgc gcggatggat gctctgctga aagccggcac attgcgcctg tcgctgacct
    23341 ttaaccctgc tcatgcccag caaaaaatcg ccagcggcga tttgcctgca agcagttaca
    23401 gttttggttt taacgagggg atgattggca acgtgcattt cgtcaccatt cctgctaacg
    23461 cgaatgccag tgctgcggcg aaggtggttg ccaatttcct gctctcaccc gatgcgcaac
    23521 tgcgtaaagc agatcccgct gtctggggcg atccttctgt tctcgatccg caaaaactgc
    23581 ctgacgagca gcgcgaaata ttgcaatcaa gaatgccgca ggatctgccg ccggtactgg
    23641 ctgaaccgca cgcaggatgg gtgaatgcac tggaacaaga atggttacgc cgttacggta
    23701 cgcattaatc tttttgctgt gggcgatggt ggcggtgatt tatgcaccgc tgatcccggc
    23761 agctctcacg ctgatatcgc ctgcgttgtc gttgacacac tggcaggcgt tatttgccga
    23821 tccacagtta ccgcatgcat tactggcaac gctggtgtcg acaaccatcg cggcggtcgg
    23881 ggcattgttg attgccctgc tggtgattgt ggcgctatgg cctgggccga aatggcagcg
    23941 tatgtgcgcc cgtctgccgt ggctgctcgc cattccccat gtggcttttg ccaccagcgc
    24001 cctgctgctc tttgctgacg gagggctgct atatgactat ttcccgtatt tcactccgcc
    24061 aatggaccga tttggcatcg gtctgggcct cacccttgca gtgaaagaaa gcgcatttct
    24121 gctgtggatc ttagcggcag tattgagcga aaaacggctg ttgcagcagg tcattgtgct
    24181 ggattcgctg ggctacagcc gctggcaatg cctgaactgg ctgctgttgc cctccgtcgc
    24241 gcctgcgctg gcaatggcga tgctggcgat tgttgcctgg tcgctttcgg tcgtggatgt
    24301 ggcgattatt cttgggccag gtaatccacc gacgctggca gtaattagct ggcagtggtt
    24361 aactcagggc gacgcggatc aacaaacgaa aggcgcactc gccagtctgc tgctgatgct
    24421 gttactcgcc gcctacgttt tgctgagcta tctgctatgg cgcagctggc ggcgtactat
    24481 tccccgcgta gatggcgttc gtaagcctgc cacaccttta ttaccaggca ctacgctggc
    24541 gagtttttta cccttaaccg gtgtgctgtg tgtggttctg ctggcgatcc tcgcggatca
    24601 gtcgacgatc aatagtgaag cactcatcaa cagtctgaca atggggctgg tagcaacatt
    24661 catcgctttg ctcctgttac tgcagtggct ggaatggggg ccacagcgtc gccagttgtg
    24721 gctatggttg cccattctat tgcccgctct gccactggtg gcgggccagt acacgctggc
    24781 gctatggctg aacctggata gaagctggac ggcggtggtc tgggggcatc tgctgtgggt
    24841 aatgccgtgg atgctgttta tcctgcaacc cgcctggcag cgcattgatt cacggttaat
    24901 tttgattgcg caaacactga gctggtcgcg ggccaaaatc ttcttttacg tgaaatgtcc
    24961 gcttatgcta cgccctacgc tgattgcctt cgcggtggga ttttcagtca gtattgcgca
    25021 gtatatgccg acgctgtggc tgggcgcggg gcgttttccg acgctcacca ctgaggcggt
    25081 ggcattaagc agcggcggca gcaatggtat tttcgccgcc caggctttat ggcaactgct
    25141 attaccgctt attatttttg ccctgaccgc gttagtcgca aaatgggtag gttatgtcag
    25201 acaaggactc cgctaatgct ctgcgtgaaa aatgtttcgc tacgtttacc agaaagccgc
    25261 ttgctgacaa acgttaactt tacggtggat aaaggtgaca ttgtcacgtt aatggggccg
    25321 tctggctgtg gaaaatccac tctgttttca tggatgattg gtgcactggc tggacagttt
    25381 tcttgtacag gtgagctatg gctcaatgag caacggattg acatgctacc caccgcacag
    25441 cgtcagattg gcattctttt ccaggatgca ctgttatttg accagttcag cgtcgggcaa
    25501 aatttactgc tggcgctacc gtcgacgctc aaggggactg ccaggcgcaa tgccgtgaaa
    25561 gacgcgcttg atcgagcggg actggctgaa acttatcacc aggaccctgc gacattatca
    25621 ggcggtcagc gagcgcgggt ggccctgctg cgcgcccttc tcgctcagcc aaaagcgtta
    25681 ctcctggatg agccattcag ccgtcttgat gtggctctgc gcgataattt tcgccagtgg
    25741 gtgttcagcg aagttcgcga actggcgatc cccgtcgttc aggtaacgca cgatctccag
    25801 gatgttcctg ctgatagttc tgttctggat atggagcagt ggtcagaaaa ttacaacaaa
    25861 ctgcgataac gcaaagtttt tctcaatgcg tcagttcaga atggcgcact caaaactaca
    25921 atgtcgggat tttcgatgaa acgtgtttct caaatgaccg cgctggcaat ggctttaggg
    25981 ctggcttgcg cttcttcgtg ggccgctgaa ctggcgaagc ctcttacact tgaccagctt
    26041 caacaacaaa atggcaaagc gatagatact cgccccagcg cgttttataa cggctggcca
    26101 caaaccttaa atggcccttc tggtcatgaa cctgccgcct taaacctctc tgccagctgg
    26161 ctcgacaaaa tgagcaccga acagctcaac gcgtggatca agcaacataa cctgaaagcc
    26221 gatgccctgg tggcgctgta cggtaatgac aaagatgtcg acgccgtcaa aacgcgactg
    26281 caaaaagcag gttttacgca tatctccatt ctgagtgacg cgctaagcga accttcccgt
    26341 ctacaaaaac tgccgcactt tgagcagctg gtttatccgc aatggctgca cgacctgcaa
    26401 caaggtaaag aggttacggc gaaacctgcc ggtgactgga aagtcattga agcggcctgg
    26461 ggcgctccta agctttacct tatcagccat attcccggtg ctgactacat cgataccaac
    26521 gaagtggaaa gcgaaccgct gtggaacaaa gtttctgatg aacaactaaa agcgatgctg
    26581 gcaaaacacg gcattcgcca tgacaccacg gtcattctgt acgggcgtga cgtatacgct
    26641 ggagcgcgtg tggcgcaaat tatgctctac gcaggcgtga aagatgtgcg tctgctggat
    26701 ggcggctggc aaacctggtc cgacgcggga ctgcctgttg agcgaggaac gccaccgaaa
    26761 gtgaaagcgg aaccggattt cggcgtgaag atcccggcac aaccgcagtt gatgctcgat
    26821 atggaacagg cccgtggact gctgcatcgc caggatgcat cgctggtgag cattcgttcg
    26881 tggccagaat ttatcggtac gaccagcggt tacagctata ttaaaccaaa aggtgaaata
    26941 gccggagcac gttggggaca cgctggtagc gactcgacgc atatggaaga ttttcataac
    27001 ccggatggca ccatgcgcag cgccgatgat attaccgcta tgtggaaagc gtggaatatc
    27061 aaaccagagc agcaagtttc attctactgc ggcaccggct ggcgcgcgtc cgaaaccttt
    27121 atgtacgcac gcgccatggg ttggaagaat gtttccgtgt atgacggcgg ctggtacgaa
    27181 tggagcagcg atccaaaaaa tccggtagca accggtgaac gcggcccgga cagtagcaaa
    27241 taacattgca attactgacg ctggtgcgac ttcagcgtca gatacccact ccacacccgc
    27301 gtaaaggtcg tcatccagca caacgcaccg aagatccacg caaaccacgc aaaccatgca
    27361 gggaataaac atcccagcac aaacagtaag atcgtttctg tgccttcggt taacccgccc
    27421 agataataaa acgatttatg cgcataaccg ggattatcaa tctgatgttt cgccgccagc
    27481 gcagcaaaag cgagaaaact gctgcctgtg ccgataaacg caaacagcag ccagccgcct
    27541 gccagggcgt tttgctgcgg tgcggcgagg ataaacccaa aaggtaccag cgcgtaaaaa
    27601 agaaaatcga gagaaatatc aagaaagccg cccgcgtcgg taagccctct gcgccgcgcc
    27661 agcgcaccgt ccagaccatc aagcagcctg ttcaacaaaa tgacgacaag cgccgccaga
    27721 taccagccca gcgccagaaa aggcagtgcc agcacgccga tggcaaatcc cactaatgtt
    27781 aaaccatctg gcgtaatgcc cggtttatca agaacccgca cgcactgatg caacaacggt
    27841 ttaatccggg gatgaagatg gcggtctagc acaggcactc cttaaatata aagcctttct
    27901 gattgagcaa cagtgcggat attatggcat ttttcgctta tctgcccgtg tgtaatttat
    27961 gaaaatgatt gaagttgttg ccgccatcat tgaacgtgat ggcaaaattt tactcgcgca
    28021 acgccccgcc cagagcgatc aggcgggatt atgggagttt gccggtggta aagtcgagct
    28081 ggatgaaagc cagcagcagg cactggtgcg tgagttaaac gaagaattgg gcatcgaagc
    28141 aactgtgggt gagtatgttg ccagccatca gcgagaagtt tcgggccgga ttatccatct
    28201 tcatgcctgg cacgtacccg acttccacgg gacgttacag gcacatgaac atcaggcgct
    28261 ggtctggtgc tcacctgaag aggcgctgca atatccgctg gcccctgctg acattccatt
    28321 attagaggcg tttatggctt tacgcgccgc cagaccagcg gattagtgct aagggttttg
    28381 tcatcccgct ggcattgcag cagtattccc tcggctttaa ttaccgcgcc ttcagaataa
    28441 tttttatcct gataaacgca gcactgagta cagggctgcg ctgactgccc gcctgaactg
    28501 aacacttctg gcggtacgtt tacctccacg tccggacgat aatgcgggtt agccagtgca
    28561 attaatggaa atgctaatac tacggcgaac aatgctcgac tcacagggaa ctccttaacg
    28621 ttattgtctc tgctactgat aacggtagcc gggtggcaaa actttagcgt ctgagttatc
    28681 gcatttggtt atgagattac tctcgttatt aatttgcttt cctgggtcat ttttttcttg
    28741 cttaccgtca cattcttgat ggtatagtcg aaaactgcaa aagcacatca cataaacaac
    28801 at
//
LOCUS       DAPGWB010000050        28114 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.050, whole genome shotgun sequence.
ACCESSION   DAPGWB010000050 DAPGWB010000000
VERSION     DAPGWB010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 28114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28114
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.050"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..209)
                     /gene="tuf"
                     /locus_tag="RHX79_002070"
     CDS             complement(<1..209)
                     /gene="tuf"
                     /locus_tag="RHX79_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDV2197241.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVE"
     gene            complement(280..2394)
                     /gene="fusA"
                     /locus_tag="RHX79_002071"
     CDS             complement(280..2394)
                     /gene="fusA"
                     /locus_tag="RHX79_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDV2197242.1"
                     /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKT
                     RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEW
                     HQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQ
                     AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT
                     FFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT
                     TGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD
                     EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQ
                     SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPL
                     AGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP
                     EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM
                     EFLKYDEAPSNVAQAVIEARGK"
     gene            complement(2491..2961)
                     /gene="rpsG"
                     /locus_tag="RHX79_002072"
     CDS             complement(2491..2961)
                     /gene="rpsG"
                     /locus_tag="RHX79_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015873274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDV2197243.1"
                     /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY
                     SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW"
     gene            complement(3058..3432)
                     /gene="rpsL"
                     /locus_tag="RHX79_002073"
     CDS             complement(3058..3432)
                     /gene="rpsL"
                     /locus_tag="RHX79_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDV2197244.1"
                     /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
                     DCSGVKDRKQARSKYGVKRPKA"
     gene            complement(3558..3845)
                     /gene="tusB"
                     /locus_tag="RHX79_002074"
     CDS             complement(3558..3845)
                     /gene="tusB"
                     /locus_tag="RHX79_002074"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HDV2197245.1"
                     /translation="MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYL
                     ESLRNAPIKVYALNEDLIARGLTGQISNDIIPIDYTDFVRLTVKHSSQMAW"
     gene            complement(3853..4212)
                     /gene="tusC"
                     /locus_tag="RHX79_002075"
     CDS             complement(3853..4212)
                     /gene="tusC"
                     /locus_tag="RHX79_002075"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HDV2197246.1"
                     /translation="MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLTVFFIADGV
                     FQLLSGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLE
                     ADALRRELANYDVILRF"
     gene            complement(4212..4598)
                     /gene="tusD"
                     /locus_tag="RHX79_002076"
     CDS             complement(4212..4598)
                     /gene="tusD"
                     /locus_tag="RHX79_002076"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HDV2197247.1"
                     /translation="MRFAIVVTGPAYGTQQASSAFQFAQALIVEGHELSSVFFYREGV
                     YNANQLTSPASDEFDLVRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSN
                     LQPGFTLSGLGALAEASLTCDRVVQF"
     gene            complement(4598..5320)
                     /locus_tag="RHX79_002077"
     CDS             complement(4598..5320)
                     /locus_tag="RHX79_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV2197248.1"
                     /translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG
                     SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
                     RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
                     SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI
                     SKHTVYLYIRQFKSGDFQGQDK"
     gene            complement(5487..6299)
                     /gene="fkpA"
                     /locus_tag="RHX79_002078"
     CDS             complement(5487..6299)
                     /gene="fkpA"
                     /locus_tag="RHX79_002078"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDV2197249.1"
                     /translation="MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKND
                     DQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTL
                     QAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEA
                     PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLV
                     IPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK"
     gene            6520..6738
                     /locus_tag="RHX79_002079"
     CDS             6520..6738
                     /locus_tag="RHX79_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HDV2197250.1"
                     /translation="MQDLSLEARLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDH
                     LRLLTEKLKASQPSNIASQAEETPPPHY"
     gene            complement(6787..7377)
                     /gene="slyD"
                     /locus_tag="RHX79_002080"
     CDS             complement(6787..7377)
                     /gene="slyD"
                     /locus_tag="RHX79_002080"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV2197251.1"
                     /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
                     LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
                     GPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
                     DHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH"
     gene            complement(7472..7672)
                     /locus_tag="RHX79_002081"
     CDS             complement(7472..7672)
                     /locus_tag="RHX79_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheV family putative metal-binding protein"
                     /protein_id="HDV2197252.1"
                     /translation="MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMRE
                     ADKEARDHVRKDEQVIGIFHPD"
     gene            complement(7682..9487)
                     /gene="kefB"
                     /locus_tag="RHX79_002082"
     CDS             complement(7682..9487)
                     /gene="kefB"
                     /locus_tag="RHX79_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefB"
                     /protein_id="HDV2197253.1"
                     /translation="MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGP
                     WGLGFISDVDEILHFSELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALL
                     AGLLMLTDFAWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAV
                     IPALALVPLLAGSADEHFDWMKIGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFT
                     AATLLLVLGSALFMDALGLSMALGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFI
                     SVGMSLNLGVLYTHLLWVVISVVVLVAVKILVLYLLARLYGVRSSERMQFAGVLSQGG
                     EFAFVLFSTASSQRLFQGDQMALLLVTVTLSMMTTPLLMKLVDKWLSRQFNGPEEEDE
                     KPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGD
                     ATQVDLLRSAGAEAAVSIVITCNEPEDTMKLVEICQQHFPHLHILARARGRVEAHELL
                     QAGVTQFSRETFSSALELGRKTLVTLGMHPHQAQRAQLHFRRLDMRMLRELIPMHADT
                     VQISRAREARRELEEIFQREMQQERRQLDGWDEFE"
     gene            complement(9487..10038)
                     /gene="kefG"
                     /locus_tag="RHX79_002083"
     CDS             complement(9487..10038)
                     /gene="kefG"
                     /locus_tag="RHX79_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312229.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     ancillary protein KefG"
                     /protein_id="HDV2197254.1"
                     /translation="MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHY
                     PDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAG
                     KYWRSVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSA
                     QELASHARAYGDWLANPLSPGGR"
     gene            10169..12082
                     /locus_tag="RHX79_002084"
     CDS             10169..12082
                     /locus_tag="RHX79_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV2197255.1"
                     /translation="MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLL
                     ALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDAN
                     ERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIH
                     IEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
                     QSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADE
                     SPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPN
                     LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPF
                     DGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIAR
                     LEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQ
                     EQLEQMLLEGQSN"
     gene            12082..13104
                     /locus_tag="RHX79_002085"
     CDS             12082..13104
                     /locus_tag="RHX79_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HDV2197256.1"
                     /translation="MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFT
                     PYWQRLELPDGDFVDLAWSEDPAQAKHKLRLVVFHGLEGSLNSPYAHGLVEAAQKRGW
                     LGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
                     CLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAY
                     PGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIH
                     AKDDPFMDHQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTY
                     LEAKSC"
     gene            13098..13316
                     /locus_tag="RHX79_002086"
     CDS             13098..13316
                     /locus_tag="RHX79_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HDV2197257.1"
                     /translation="MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKR
                     QLQCGEAVLVWSELHETVNIMPRSQFRE"
     gene            13370..14239
                     /locus_tag="RHX79_002087"
     CDS             13370..14239
                     /locus_tag="RHX79_002087"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HDV2197258.1"
                     /translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF
                     HRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYD
                     EAVPWNQVPGTFTPWQSLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLE
                     WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFA
                     AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML
                     PLVQRLMEGKKIE"
     gene            complement(14294..14698)
                     /locus_tag="RHX79_002088"
     CDS             complement(14294..14698)
                     /locus_tag="RHX79_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HDV2197259.1"
                     /translation="MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAA
                     GGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVA
                     RAVDLSAEKYCSVALMLEKAVNITHSYEVVAA"
     gene            15000..15632
                     /gene="crp"
                     /locus_tag="RHX79_002089"
     CDS             15000..15632
                     /gene="crp"
                     /locus_tag="RHX79_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HDV2197260.1"
                     /translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
                     KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
                     FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
                     PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
     gene            15683..17773
                     /locus_tag="RHX79_002090"
     CDS             15683..17773
                     /locus_tag="RHX79_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDV2197261.1"
                     /translation="MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVP
                     ACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTA
                     ELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQP
                     LRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLS
                     AQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARL
                     RVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPL
                     YARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWI
                     LMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASY
                     LILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQW
                     QSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEP
                     AFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQ
                     RLEYDEPGSSGDANIMDSPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPH
                     HGIWLSRKLRDSKA"
     gene            complement(17840..19060)
                     /gene="argD/dapC"
                     /locus_tag="RHX79_002091"
     CDS             complement(17840..19060)
                     /gene="argD/dapC"
                     /locus_tag="RHX79_002091"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     acetylornithine/succinyldiaminopimelate transaminase"
                     /protein_id="HDV2197262.1"
                     /translation="MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEY
                     VDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERV
                     VFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
                     FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQ
                     HQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPISAMLTTAEIASAF
                     HPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSD
                     IRGMGLLIGAELKPQFKGRARDFLYAGAGAGVMVLNAGPDVMRFAPSLVVEDADIDEG
                     MQRFAHAVAKVVGA"
     gene            complement(19146..19709)
                     /gene="pabA"
                     /locus_tag="RHX79_002092"
     CDS             complement(19146..19709)
                     /gene="pabA"
                     /locus_tag="RHX79_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 2"
                     /protein_id="HDV2197263.1"
                     /translation="MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKP
                     QKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG
                     KTSPITHNGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQW
                     DLEGVQFHPESILSEQGHQLLANFLHR"
     gene            complement(19741..20343)
                     /locus_tag="RHX79_002093"
     CDS             complement(19741..20343)
                     /locus_tag="RHX79_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative adenosine monophosphate-protein
                     transferase Fic"
                     /protein_id="HDV2197264.1"
                     /translation="MSDKFGEGRDPYLYPGLDIMRNRLNIHQQQRLEQAAYEMTALRA
                     ATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNAL
                     MQDLEEEGYLVGLEKAKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQL
                     SWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE"
     gene            complement(20333..20500)
                     /locus_tag="RHX79_002094"
     CDS             complement(20333..20500)
                     /locus_tag="RHX79_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfG family protein"
                     /protein_id="HDV2197265.1"
                     /translation="MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALA
                     RLEELRRHYER"
     gene            complement(20605..21177)
                     /gene="ppiA"
                     /locus_tag="RHX79_002095"
                     /gene_synonym="rotA"
     CDS             complement(20605..21177)
                     /gene="ppiA"
                     /locus_tag="RHX79_002095"
                     /gene_synonym="rotA"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase A"
                     /protein_id="HDV2197266.1"
                     /translation="MFKSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELEL
                     DKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEAD
                     NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD
                     KISQVPTHDVGPYQNVPSKPVVILSAKVLP"
     gene            21448..22629
                     /gene="tsgA"
                     /locus_tag="RHX79_002096"
     CDS             21448..22629
                     /gene="tsgA"
                     /locus_tag="RHX79_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter TsgA"
                     /protein_id="HDV2197267.1"
                     /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSS
                     MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAA
                     MFILGVVSGITMSIGTFLVTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSI
                     EWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCY
                     ILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTV
                     LAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVL
                     TCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTS
                     H"
     gene            22891..25434
                     /gene="nirB"
                     /locus_tag="RHX79_002097"
     CDS             22891..25434
                     /gene="nirB"
                     /locus_tag="RHX79_002097"
                     /EC_number="1.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-nitrite reductase large subunit"
                     /protein_id="HDV2197268.1"
                     /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAY
                     DRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFY
                     DKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
                     AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGV
                     EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDI
                     YAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIG
                     DAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIE
                     LPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK
                     AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF
                     EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYS
                     VIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAG
                     FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCT
                     RECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFY
                     IRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVVCEWTETV
                     NTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA"
     gene            25431..25757
                     /gene="nirD"
                     /locus_tag="RHX79_002098"
     CDS             25431..25757
                     /gene="nirD"
                     /locus_tag="RHX79_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HDV2197269.1"
                     /translation="MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN
                     IDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDG
                     VVQLRG"
     gene            25884..26690
                     /gene="nirC"
                     /locus_tag="RHX79_002099"
     CDS             25884..26690
                     /gene="nirC"
                     /locus_tag="RHX79_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026212.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite transporter NirC"
                     /protein_id="HDV2197270.1"
                     /translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL
                     IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMW
                     AILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC
                     NWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYT
                     LAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETATG"
     gene            26709..28082
                     /gene="cobA"
                     /locus_tag="RHX79_002100"
     CDS             26709..28082
                     /gene="cobA"
                     /locus_tag="RHX79_002100"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDV2197271.1"
                     /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALA
                     FIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDALNQRVSEAAEARRIFCNV
                     VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQ
                     LRGRVKQQFATMSERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEV
                     VLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC
                     VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAAS
                     GCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQ
                     KLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDK
                     LNWFSNH"
BASE COUNT         6804 a         7549 c         7111 g         6650 t
ORIGIN      
        1 tattcaacgt gagaagtgtt gatggtgata ccacgagctt tttcttccgg cgcgttatcg
       61 atctggtcga atgcacgagc agcaccgccg taggttttag ccagtacggt ggtgattgca
      121 gcggtcagag tagttttacc gtggtcaacg tggccgatag taccaacgtt aacgtgcggt
      181 tttgtacgtt caaatttttc tttagacacg gctatattcc ttactatagt gctctcccct
      241 tcaggagaga gcacgggact ttggtattaa cccttaggct tatttaccac gggcttcaat
      301 tacggcctga gcaacgttac tcggcgcttc atcatacttc aggaattcca tagtgtatga
      361 tgcacgacct ttggtcagag aacgcagctg agttgcgtat ccgaacattt cagacagcgg
      421 tacttcagcg tggatcttaa cgccagtaac ttcagattcc tgacctttga gcataccacg
      481 acgacggctc aagtcaccga taacgtcacc ggtgttctct tccggagttt ctacttcaac
      541 cttcatgatc ggctcaagca gaactggttt cgctttctta aagccttctt taaaggcgat
      601 agaagcagcc agtttaaacg ccagttcaga ggagtcaacg tcatggtaag aaccgaagtg
      661 cagacgaata cccatgtcta ctaccgggta gcctgccagc ggacctgctt tcagctgttc
      721 ctggatacct ttatcaacgg ccgggatgta ttcgccaggg attacaccac ctttaatgtc
      781 gttgatgaac tcgtagcctt tcgggtttga acccggctcc agcgggtaca tgtcgataac
      841 aacatgacca tactgaccac gaccaccaga ctgtttcgcg tgtttacctt caacatcggt
      901 aactttctgg cggatagttt cacggtaagc aacctgcggt ttacctacgt tcgcttcaac
      961 gttgaattca cgcttcatac ggtcaacgat gatgtcgagg tgcagttcgc ccatacccgc
     1021 gatgatggtc tggttagatt cttcgtcagt ccatacacgg aaagacgggt cttctttagc
     1081 cagacggccc agagccagac ccattttttc ctggtcagct ttggttttcg gttcaactgc
     1141 gatggagatt accggctcag ggaattccat acgttccaga atgatcggcg catccgggtc
     1201 acacagggtg tcaccagtgg ttacgtcttt cagaccgata gcagcagcga tgtcgcccgc
     1261 gcgaacttct ttgatctctt cacgtttgtt agcgtgcatc tgaacgatac gaccgaaacg
     1321 ctcacgtgca gctttcacgg agttcagtac ggtatcacca gagttaacca caccggagta
     1381 aacacggaag aaggtcaggt taccaacaaa cgggtcggta gcgattttga acgccagtgc
     1441 agagaacggc tcgtcatcac ttgcgtgacg ttcagccgga gtgtctttac cgtcgtccag
     1501 gataccgttg atcgcaggta cgtcaaccgg ggatggcagg taatcaatta ccgcatccag
     1561 catcgcctga acacctttgt tcttgaacgc agaaccacag gttaccagga tgatttcgtt
     1621 gttcagaacg cgctgacgca gagcaccttt gatttctgct tcagtcagtt cttcaccacc
     1681 caggtatttt tccatcagct cttcagaagc ttcagctgcg gattcgatca ggttctggtg
     1741 ccattcgtta gccagttcaa ccatgtctgc cgggatatct tcgtattcga aggttacgcc
     1801 ctggtcagcg tcgttccagt tgatagcttt cattttcacc aggtcaacaa caccggtgaa
     1861 atgttcttca gcaccaatcg ccagctgcag cggaaccggg ttcgcgccca gacgggtttt
     1921 gatctggtta acaactttca ggaagttcgc acccatgcgg tccattttgt taacgaacgc
     1981 aatgcgcgga actttatatt tgtttgcctg acgccatacg gtttcagact gcggctgaac
     2041 accaccaact gcgcagtaaa ccattaccgc accatcgaga acacgcatgg aacgttctac
     2101 ttcgattgtg aagtcaacgt gccccggggt gtcgatgatg ttgatgcgat gcggctcata
     2161 ctgcttagcc ataccagacc agaatgcagt agtcgcagcg gaagtgatgg taataccacg
     2221 ttcctgctcc tgctccatcc agtccatggt tgcagcgccg tcatgaactt caccgatttt
     2281 atggtttaca ccggtgtaga acagaatacg ttcggtagta gtggttttac cggcgtcgat
     2341 gtgcgcactg ataccgatgt tacggtagcg tgcgatgggt gttgtacgag ccatttgttt
     2401 cctcgtttat cttttaggcg ttcaatttaa gtagcccaaa gcgggctgct tactggaagc
     2461 gcccgcctgg tgactaaaac tccgaaggga ttaccaacgg tagtgtgcga acgccttgtt
     2521 ggcttcggcc atacggtgaa cgtcttcacg tttcttaact gcagtacctt tgttttctgc
     2581 agcatcagaa agttcgttcg ccaggcgcag agccatggat ttatcaccgc gtttacgagc
     2641 agcttcaacg atccaacgca ttgccagagc attacgacga accggacgga cttcaactgg
     2701 tacctgataa gtagaaccac caacgcggcg agacttaact tctacagtcg ggcgcacgtt
     2761 ttcgagagct acttcgaatg cttccagttc agatttacca gagcgctgag ccagggtctc
     2821 cagcgcgctg tatacgatag attcagcagt agatttttta ccatctacca tcaggatatt
     2881 tacaaattta gccagcagtt ctgatccgaa cttcggatcc ggcagaattt tacgctgacc
     2941 aatgacgcga cgacgtggca tggaaatact ccgttgttaa ttcaggattg tccaaaactc
     3001 tacgagttta gtttgacatt taagttaaaa cgtttggcct tacttaacgg agaaccatta
     3061 agccttagga cgcttcacgc catacttgga acgagcctgc ttacggtctt taacgccgga
     3121 gcagtcaagc gcaccacgta cggtgtggta acgaacaccc gggaggtctt taacacgacc
     3181 gccacggatc aggatcacgg agtgctcctg caggttgtga ccttcaccac cgatgtagga
     3241 agtcacttcg aaaccgttag tcagacgaac acggcatact ttacgcagcg cggagttcgg
     3301 ttttttagga gtggtagtat atacacgagt acatacgcca cgtttttgcg ggcatgcttc
     3361 cagcgcaggc acgttgcttt tcgcaacttt gcgagcacgt ggtttgcgta ccagctggtt
     3421 aactgttgcc attaaatagc tcctggtttt agcttttgct tcgtaaacac gtaataaaac
     3481 gtcctcacac aatatgagga cgccgaattt tagggcgatg ccgaaaaggt gtcaagaaat
     3541 atacaacgat cccgccatca ccaggccatc tggctggagt gcttaaccgt aagtctgacg
     3601 aaatcagtat agtcaatggg aatgatgtcg ttcgaaattt gaccagtcaa accgcgggca
     3661 ataaggtctt cgttcagggc atagacctta atgggggcat tacgcagact ttcaaggtag
     3721 cggttaccgt caactgcggc agttacgcca tcttgcaata atagcagttc gtctccttca
     3781 ctgagcagac gcagcagcgc agcaaaatcc gtcagccagg gtgaacgatg taacgtgtgc
     3841 agcataaacg cctcaaaacc tcaaaataac atcgtagttg gcgagttcgc ggcgtaaggc
     3901 atctgcttcg agcggcgtgg cttcgacaac aaagggtgtc tgcggatcta acccgcgttc
     3961 gcgcagtgaa gccgcacaaa cccagcactg ttcaatgtcg tacagaccca acaatttaaa
     4021 agtggcaatg taatcacgcg ccagcactgc atcgggcttt tgtcctgaca gcagctgaaa
     4081 aacgccatca gcaataaaga agacggtcag atcgtcagtt aatgcggaag ttgccagtaa
     4141 agcatctaaa ccttcccgac cagcagctgt accatgaggt gcagtagaaa aaacaaacgc
     4201 aattcgtttc atcagaactg taccaccctg tcacaggtca gcgaggcttc cgccagcgcg
     4261 ccaagtccgc ttaaggtaaa tcccggctga aggtttgacg aagccagccc cagccttcct
     4321 gcttcagttt catcgacgat accgcggcgt aacgctgccg ctacgcagat attcagcgcc
     4381 acaccatgtt gcgcattcaa ctgttgccag ccgcgcacaa ggtcaaattc gtcacttgcc
     4441 ggtgaggtca attggttagc gttatagacc ccttcccgat agaaaaagac gctgcttaac
     4501 tcatggcctt ctactatcag cgcctgcgca aactgaaaag cactactcgc ctgttgcgta
     4561 ccgtatgctg gcccggtcac cacgatggca aaacgcatta cttatcttgc ccctggaaat
     4621 caccgctttt gaactggcgg atgtagagat agacagtgtg tttggagatg ttcaggcggt
     4681 cagcaacctg gttgatcgcg tctttaatat cgaagatccc tttctcgtag agattcagca
     4741 cgatctgacg atttttggcg ttattagaaa cattgcgatc ggcattcact tcttcgatgg
     4801 tgaactccag cgtttgggta accagatctt caacagaaga ggcaaagttg acgcttgaac
     4861 cgacatccgg ggtttctggc ggcacaaaag tgctcataat ctgcgagaag ggaacatcaa
     4921 gattcatatt gatgcacagc agaccaatta cacgctgttc gcggttacga atcgcgatag
     4981 tcagggactt cattaatacg ccgcttttgg cgcgagtaaa gtagcattta gaaacgctgc
     5041 tatccgctcc cgtcatatcg tgcagcatac gtagcgccag gtcagtaatt ggcgaaccaa
     5101 tcttccggcc tgtatgttca ccgttagcaa tgcgaatggc tgaacatttt agatcctgca
     5161 aagagtgcaa aacgatttca cagtgggagc caataagcat cgctaacccg tccaccaccg
     5221 cttcgtagga tttcagaata tcaaaatcgg tctggtcgaa aggacgttga tccagtaaat
     5281 ccaactcact ggtttcgttg gttaaaagcg acctggacat gaaaaaaaac actccttttc
     5341 aggagcctgt cgttaacttt tcagggcagg ctcattaatg atgcgggtaa ctaaattaat
     5401 acagcggagg ttccgctttc cagcactaat tatatccggc ctgtaataaa aaaaccgccg
     5461 cctggtcagg cggcggttct taatgcttat tttttagcag aatctgcggc tttcgcatca
     5521 gcttccggct ttgcatcagc cttcggcgct ggtttcacat ccagcagctc tacgtcaaac
     5581 accagggtag aattcggtgg gatccccgga acacccgctt tgccgtaagc cagttctggt
     5641 ggaataacca gtttgatctt accgcctttc ttgatgttct tcagaccttc tgtccaaccc
     5701 gggataacac cgtccagacg gaaagaaagc ggttcaccac gggtgtaaga gttgtcgaac
     5761 tctttaccgt cgatcagcgt acctttgtag ttcactacaa cagtatcgct gtctttcggt
     5821 gcttcgcctt taccggcttc tactacctga taaaccagac cagttgaaga ggttttcaca
     5881 cctttctctt tggcaaattt ctcgcggtac tctttacctt ttgcttcgtt atcagccgcg
     5941 tctttttcca tcttcgcctg agcagaagac ttcacgcgag cttcgaatgc ttgcagagtc
     6001 tgttcgatct cttggtcgga gagtttgctc ttatcagcaa atgcatcctg aacaccagcg
     6061 atcagctgat ctttatccag tttgatgccc agtttttctt gttctttaag agagttttcc
     6121 atgtaacgac ccagcgaagc acccagtgca taagctgatt tctgatcgtc atttttgaac
     6181 gctgctttgc tgtcagcagt tgtagcaggt tttgcagctt cagcagcaaa agtgattggt
     6241 gcatgcaggg caacggccat tgtggtcgcc agcagcgtta ctttaaacag tgatttcatc
     6301 catatctcca ggatcggggc atctcacccc agggttaact attatcagaa gggtactata
     6361 aagcgttgtc gaacaaatct acatacagac acgccctatt atcatctatt ttcagactct
     6421 ttttgtttaa attagtttcg atgaccgcga aatgagtgct gtctcgggca gcaaagttaa
     6481 gtagaatccg cggcgaccat tcgacaaaag aggtgaatca tgcaggattt atcattggaa
     6541 gcacgcctgg cagagctgga gagccgactg gcttttcagg aaatcaccat tgaagaactg
     6601 aacgtcacgg tgaccgctca tgaaatggag atggcgaaac tgcgcgatca tctgcgtctg
     6661 ctgaccgaga agttaaaagc cagccagccg tcgaacatcg cgtcgcaggc tgaagaaacg
     6721 ccaccgccac attattgagg cgtaaaaaaa gcggggattc cccgcttttt tgtcaccttt
     6781 tcggtattag tggcaaccac aaccgccgtt gcctttaccg ccacagcagc cttcgccacc
     6841 gtgttcatga ccgtgatcgt ggccatgacc gccgcagcaa ccgtcgtggt cgtgatcgtg
     6901 gtgatgatcg tgcgcgccgt gaacgtggcc atgagccagt tcttcttcgg tcgcttcgcg
     6961 aatcgccaca acttcaacgt tgaatttcag gttctgaccg gccagcatgt ggttaccatc
     7021 aaccacgacg tgatcgtctt caaccgcagt gatttcaacc ggtaccggac cctggtcagt
     7081 ttcagccagg aaacgcatac ctacctgcag ttcatcaacg cccataaata cgtctttagg
     7141 aacacgttgc accaggtttt cgtcgtactg accgtaagcg tcgttcgcgc caacagcgac
     7201 atcaaatttg tcgccaactt catgaccttc cagcgccgtt tccaggccag agatcaggga
     7261 accgtgacca tgcaggtagt ccagcggcgc actcaccgga gactcatcaa ccaacacacc
     7321 gtcttctgta cgtacctgat aggccaggct gaccaccagg tcttttgcta ctttcatgat
     7381 atctcctgag catgggaaga atagtggcgc agattgtagc ggaattctgc agccgtgtac
     7441 tcactagctt aaaaaaactc ggcgcatatc gctagtccgg atgaaaaatc ccgatcactt
     7501 gctcatcttt gcgaacgtga tcgcgggctt ctttgtctgc ttctcgcatc tggtgtccgc
     7561 acttaacgca ttcaacaata tcaatattat tttcgcgcca catcgccatt gaatcctgcg
     7621 cctgacaggc cgggcatttt gcgcccgcaa taaaacgttt tcggattgcc atctttaccc
     7681 tctactcaaa ttcatcccag ccgtccagct ggcgtcgttc ttgttgcatt tcacgctgga
     7741 aaatctcttc cagttcgcgt cgggcttccc tggcgcgaga aatttgtacg gtatcagcat
     7801 gcatcgggat taactcccgc agcattcgca tatccaggcg gcgaaaatgc agttgcgccc
     7861 gctgtgcctg atgcggatgc atgccaagcg tgaccagcgt cttgcgcccc agctctaacg
     7921 cactggagaa tgtttcacgg gaaaactgcg tcacccctgc ctgtaataac tcatgcgctt
     7981 ccacacgtcc gcgcgctcgc gcaagaatat gcaaatgcgg aaagtgctgc tggcatattt
     8041 ccaccagctt catggtgtct tccggctcgt tacaggtaat gacgatagac acagcggcct
     8101 ctgcacccgc agaacgtaaa agatcgacct gcgtggcgtc gccgtaataa actttgtagc
     8161 catatttacg catcaggtta acggcgctga tatcccgctc cagcacggta atgcgcattt
     8221 tatttgccat cagcaaacga ccaatcacct gaccaaaacg cccgaagccc acgacaatga
     8281 cctggggttt atcatcgttg acccacggtt tttcgtcttc ttcttccggt ccgttaaact
     8341 ggcgggatag ccatttatcc accagcttca tcagcagcgg cgtggtcatc atggaaagcg
     8401 tcaccgtcac cagcaacagc gccatctggt cgccctggaa taaacgttgt gaagaagcgg
     8461 tagaaaagag gacaaaggca aactcaccgc cctgactcaa cacgccagca aactgcatcc
     8521 gctctgagct acgcacgcca tacaatcgcg ccagcagata caacacgaga attttcaccg
     8581 ccaccagcac aaccacgctt atcactaccc acaacagatg ggtataaagc accccgagat
     8641 tgagcgacat gccgacagag ataaagaaca aaccgagcag caagcctttg aagggatcga
     8701 tagccgtttc cagttcatgg cgatattcac tttccgccag cagcacgccc gcaataaacg
     8761 taccgagcgc catcgacagc cccagcgcgt ccataaacaa tgcggaaccc aacaccaaca
     8821 gcagcgtcgc ggcggtgaac acttcccgca cgccagaagc tgcaataaaa cggaataccg
     8881 gacgcagtaa atagcgcccg ccaatcagca tgccgacaaa cgccagcacc ttcatgccga
     8941 tcttcatcca gtcgaaatgt tcgtctgccg aacccgccaa caacggcact aacgccagtg
     9001 ccgggatcac cgccagatcc tgaaacagca gaaccgaaaa cccgagctgc ccggattcgc
     9061 tgcgattcat ccctttctca cgcatcaatt gcaacgccat tgcagttgaa gacatcgcaa
     9121 ggccaatgcc accgacaacc gccgcctgcc aggcgaaatc cgtcagcatc aataatcccg
     9181 ccagcaacgc cgcgcttaac agcacctgtg ccgcgcctac gccaaaaatc gaacgccgca
     9241 gttgccaaag tttggaggga ttcaactcaa gaccgatgat aaacatcagg aataccacgc
     9301 cgagttccga aaagtggagg atctcatcga cgtcgctaat aaaccccagc ccccatggac
     9361 caattgcaat tcctgccagc aaatatccca acacagcgcc aatacccagc cgcgatgcca
     9421 gcggcaccgc agccaccgcc gcgaagagaa acagcactcc tgcgagtaaa aaatcggaac
     9481 cttccatcag cggcctcctg gagacagcgg atttgccagc cagtcaccgt aggctctggc
     9541 gtgactcgcc agctcctgtg cgctttgccg tctcgcccag taaataatga tgggacttaa
     9601 ccaatgcatc cggcacatgc ccgccgccag ttcaaaggga cgcagaacat cgctcatcgg
     9661 gtagcgattc aatgcgtcat aacggtaagc actttccggc tcgccggtgg taatcacgct
     9721 acgccagtac tttcccgcca gttggtttcc tcccggcccg ctggcaaaac cacgacttaa
     9781 tacccggtcc agccactctt tcagtagcgc cgggcagcta taggtataaa gaggatgctg
     9841 aaagacaatc acctcgtgct cgcgcagtaa tgcctgctca cgggggatat caataaaaaa
     9901 atcgggatag tgcgcataaa ggtcgtgcac ggtaacattg ctgagctgcg tggccggttt
     9961 aagcagtacc cggtttgcca ccgagtcctg agattccgga tgggcataca gcagcaaaac
    10021 tttcgctggc tgagacatca tccccctccc ggtatggttt ttgtgtatag tcgctgtttt
    10081 gggctaccat tgcgcccggt gcggcagctc gcccatacat tacattatca taatgataag
    10141 ttaacatagt ctgaacatac ggcgccttat gattgttttc tcctcgttac aaattcgtcg
    10201 cggcgtgcgc gtcctgctgg ataatgccac cgccaccatc aaccctgggc agaaagtcgg
    10261 cctggtgggt aaaaacggct gtggtaaatc taccctgctg gcattgctga aaaatgaaat
    10321 cagcgccgac ggcggcagct acacctttcc gggaagctgg caactggcgt gggtgaatca
    10381 ggaaacgccg gcgttaccgc aagcggcgct ggaatatgtc attgacggcg accgtgaata
    10441 tcgtcaacta gaagcgcagc tacacgacgc caacgaacgt aacgacgggc acgccattgc
    10501 gaccattcat ggcaagctgg atgctattga cgcatggagt attcgctccc gtgccgccag
    10561 cctgctgcac ggcctcggtt tcagcaatga acaactggag cgcccggtaa gtgatttctc
    10621 cggtggctgg cgtatgcgtc ttaaccttgc ccaggcgctg atttgccgtt cagacttgct
    10681 gctgctcgac gaaccgacta accacctcga tctcgatgcc gttatctggc tggaaaaatg
    10741 gttgaagagc tatcagggca cgctgatcct gatctctcac gaccgcgact tcctcgatcc
    10801 gatcgttgat aaaattattc atatcgaaca acaaagcatg ttcgagtaca ccggcaacta
    10861 cagttcgttt gaagtacagc gcgccacccg tctggcgcag caacaagcga tgtatgaaag
    10921 ccagcaggaa cgcgtagcgc atctgcaaag ttatatcgac cgtttccgtg ccaaagccac
    10981 caaagcgaag caggcccaga gccgcattaa gatgctcgag cgtatggagc tgattgcccc
    11041 cgcgcacgtc gacaacccgt tccgctttag cttccgcgcg ccggaaagcc tgccaaatcc
    11101 gttactgaag atggaaaaag tcagcgcggg ctatggcgat cgcattattc tcgactcgat
    11161 taaactgaac ctggtgcccg gctcgcgcat tggtctgtta ggccgcaacg gcgcgggtaa
    11221 atcgacatta atcaaactgt tagccggtga acttgcgcca gtcagcggtg aaattggtct
    11281 ggcgaaaggg atcaagctcg gctacttcgc ccagcatcaa cttgaatacc tgcgcgccga
    11341 cgaatcacct attcaacatc tggcacgttt agcgccgcag gagctggaac aaaaactgcg
    11401 tgactacctc ggcggctttg gtttccaggg cgataaagta accgaagaaa cgcgccgctt
    11461 ctcaggtggg gaaaaagccc gcctggtgct ggcattaatt gtctggcagc gtccgaatct
    11521 gctgctgctc gacgaaccga ctaaccacct tgacctcgac atgcgtcagg cactcaccga
    11581 agcattaatc gagtttgaag gcgcgctggt tgtcgtttcg cacgaccgtc atttgctgcg
    11641 ttccaccact gacgatctct acctggttca cgatcgtaaa gtcgaaccgt tcgacggcga
    11701 tctggaagat tatcaacagt ggttgagcga cgtacaaaag caggaaaacc agaccgacga
    11761 agcgccaaaa gagaatgcga acagcgccca ggcacgtaaa gatcagaagc gtcgggaagc
    11821 ggagctgcgt gcgcaaaccc agccgctgcg taaagagatt gcccgtctgg aaaaagagat
    11881 ggagaagctg aacgcgcaac tggcgcaggc ggaagagaaa ctcggcgaca gcgaactgta
    11941 tgaccagagc cgtaaagcgg agttgaccgc ctgcctgcaa cagcaagcca gcgccaaatc
    12001 cggcctggaa gagtgcgaaa tggcgtggct ggaagcccag gagcagcttg agcagatgct
    12061 gctggaaggc caaagcaact gatggcgcag ataacgacga ccgatgccaa tgaatttagc
    12121 agcagtgctg aattcacccc tatgcgcggc tttagcaatt gtcatctaca aactatgctg
    12181 ccgcgtttgt ttcgtcgtca ggtgaaattc accccgtact ggcagcggct ggagttgccc
    12241 gacggcgatt ttgtcgatct cgcgtggagt gaagaccccg cacaggcgaa acataaactg
    12301 cgtttagtgg tgtttcacgg gctggaaggc agtctcaata gcccttacgc ccacggtctg
    12361 gttgaggcgg cgcaaaagcg cggctggctg ggcgtggtga tgcattttcg cggatgcagc
    12421 ggtgaaccaa accgtatgca ccgcatttac cattcgggcg aaaccgaaga cgccagttgg
    12481 tttttacgct ggctgcaacg cgaatttggt catgcgccaa cggctgccgt cggctattcg
    12541 ctcggcggta atatgctggc ctgtttgcta gcaaaggaag gcaatgatct cccggttgat
    12601 gcggcggtga ttgtctctgc gccgtttatg ctggaagcct gtagctatca tatggaaaag
    12661 ggcttttccc gcgtttatca gcgttacttg ctgaacctgt taaaagccaa tgccgcgcgc
    12721 aagctggcag cctaccccgg aacgctgccg attaatctcg cgcagttaaa atcggtacgt
    12781 cgcatccgtg aatttgacga tctcatcacc gccagaattc acggctacgc cgacgctatc
    12841 gactattatc gtcagtgtag cgccatgccg atgctgaacc ggatcgccaa accgacgctg
    12901 attattcacg ccaaagacga tccgtttatg gatcatcagg tgatcccgaa accggaaagt
    12961 ctccccccgc aggtggagta tcaactgact gaacatggcg gtcatgttgg ctttattggc
    13021 ggtacattac ttcatccgca aatgtggctg gagtcacgca ttcctgactg gttaacaacg
    13081 tatctggagg cgaaatcatg ttgattccgt ggcaagacct ctcccccgaa acgctggaaa
    13141 atttaattga aagctttgtg ttacgtgaag gcaccgatta tggtgaacat gagcgtacac
    13201 ttgaacagaa agtcgccgac gtcaaacgcc agctacagtg cggagaagcg gtgctggtat
    13261 ggtcggagct gcacgaaacg gtcaatatta tgccgcgcag tcagtttcgc gaataacctg
    13321 caaccgtcgg cggacgagat aataatgata gctaagtcat ggagttacta tgtctgccaa
    13381 acatccggtc attgcggtaa caggatccag cggcgcgggg accaccacca ccagcctcgc
    13441 gtttcgtaaa atattcgcgc agttaaatct gcatgcagct gaggtggaag gcgacagttt
    13501 tcaccgttac acccgcccgg aaatggacat ggcgatccgc aaagcgcgcg acgccgggcg
    13561 gcatatcagc tacttcggcc ccgaggctaa cgacttcggc ctgctggaac aaaccttcat
    13621 tgaatacggt cagagcggta aagggaaatc tcgcaaatat ctgcatacct acgacgaagc
    13681 cgtaccgtgg aatcaggtac cgggaacatt caccccctgg caatctttac cggaacccac
    13741 tgatgtactg ttttatgaag gtttacacgg cggcgtagtc acgccacagc ataacgttgc
    13801 gcagcatgtg gacttactgg tcggcgtggt gcctatcgtt aaccttgagt ggattcaaaa
    13861 actgatccgc gacaccagcg agcgggggca ctcacgagaa gcagtgatgg actcggtagt
    13921 gcgttcaatg gaagattata tcaactacat cacaccgcag ttttcccgca cccatcttaa
    13981 cttccagcgc gttcccaccg tcgacacttc aaacccgttc gcggcaaaag gtatcccgtc
    14041 gctcgatgaa agctttgtgg tgatccattt tcgtaatctg gaagggatcg atttcccctg
    14101 gctgctggcg atgttgcaag gctcattcat ttcccacatc aatacgttag tggtaccggg
    14161 cggcaaaatg ggtctggcaa tggaattaat tatgctgccg ctggtgcaac gattgatgga
    14221 aggaaagaaa atcgagtaac tctgctatta cgccggataa aatactatcc ggcttcacaa
    14281 cgggatagtt aaatcacgcg gcaaccactt catacgagtg agtaatattc accgcttttt
    14341 ccagcatcaa cgccactgaa caatatttct cagcagagag atcaaccgca cgcgcaaccg
    14401 ctgcgtcttt caggtcgcga ccggtgacga taaaatgcag attaatgtgc gtaaacaggc
    14461 gtggtgcctc ttcgcggcgt tcagaggtca attttacttc acaatcgacc acatcctgac
    14521 gccctttttg caggatagaa accacatcga tggcactgca accccccgcc gccatcaaca
    14581 ccatttccat cggacttggt gctttatcgc ctgagttgcc gtccattaaa atctgatgac
    14641 cagaggcgga ttcgcccaga aaagttaacc cttcgaccca cttcactcgc gcttgcattt
    14701 ttgctactcc actgcgtcaa ttttcctgac agagtacgcg tactaaccaa atcgcgcaac
    14761 ggaaggcgac ctgggtcatg ctgaagcgag acaccaggag acacaaagcg aaagctatgc
    14821 taaaacagtc aggatgctac agtaatacat tgatgtactg catgtatgca aaggacgtca
    14881 cattaccgtg cagtacagtt gatagcccct tcccaggtag cgggaagcat atttcggcaa
    14941 tccagagaca gcggcgttat ctggctctgg agaaagctta taacagagga taaccgcgca
    15001 tggtgcttgg caaaccgcaa acagacccga ctctcgaatg gttcttgtct cattgccaca
    15061 ttcataagta cccatccaag agcacgctta ttcaccaggg tgaaaaagcg gaaacgctgt
    15121 actacatcgt taaaggctct gtggcagtgc tgatcaaaga cgaagagggt aaagaaatga
    15181 tcctctccta tctgaatcag ggtgatttta ttggcgaact gggcctgttt gaagagggcc
    15241 aggaacgtag cgcatgggta cgtgcgaaaa ccgcctgtga agtggctgaa atttcgtaca
    15301 aaaaatttcg ccaattgatt caggtaaacc cggacattct gatgcgtctg tctgcacaga
    15361 tggcgcgtcg tctgcaagtc acttcagaga aagtgggcaa cctggcgttc ctcgacgtga
    15421 cgggccgcat tgcacagact ctgctgaacc tggcaaaaca accagatgct atgactcacc
    15481 cggacggtat gcaaatcaaa attacccgtc aggaaatcgg tcagattgtc ggctgttctc
    15541 gtgaaaccgt gggacgcatt ctgaagatgc tggaagatca gaacctgatc tccgcacacg
    15601 gtaaaaccat cgtcgtttac ggcactcgtt aatcccgtcg gagtggcgcg ttacctggta
    15661 gcgcgccatt ttgtttcccc cgatgtggcg cagactgatt tatcaccccg atatcaacta
    15721 tgcacttcga caaacgctgg tgctatgttt gcccgtggcc gttgggttaa tgcttggcga
    15781 attacgattc ggtctgctct tctctctcgt tcctgcctgt tgcaatattg cgggccttga
    15841 tacgcctcat aaacgttttt tcaaacgctt aatcattggt gcgtcgctgt ttgccacctg
    15901 tagcttactg acacagctgc tactggcaaa agatgttccc ctgccctttt tgctgaccgg
    15961 attaacgctg gtacttggcg tcactgctga gttggggcca ttgcacgcaa aattgcttcc
    16021 cgcatcgctg ctggcagcca tttttaccct cagtctggcg ggatacatgc cggtctggga
    16081 accgttgctc atctatgcgt tgggcactct ctggtacgga ttgtttaact ggttttggtt
    16141 ctggatctgg cgcgaacaac cgctgcgcga gtcactaagt ctgctgtacc gtgaactggc
    16201 agattattgt gaagccaaat acagcctgct tacccagcac accgaccctg aaaaagcgct
    16261 gccgccgctg ctggtgcgcc agcaaaaagc ggtcgatcta attacccagt gctatcagca
    16321 aatgcatatg ctttccgcgc aaaataatac tgactacaag cggatgctgc gtattttcca
    16381 ggaggcgctg gatttacagg aacatatttc ggtcagtttg catcagccgg aagaggtgca
    16441 aaagctggtc gagcgtagcc atgcggaaga agttatccgc tggaatgcgc aaaccgtcgc
    16501 cgctcgcctg cgcgtgctgg ctgatgacat tctttaccat cgcctgccaa cgcgttttac
    16561 gatggaaaag caaattggcg cactggaaaa aatcgcccgc cagcatccgg ataatccggt
    16621 tgggcaattc tgctactggc atttcagccg catcgcccgc gtgctgcgca cccaaaaacc
    16681 gctctatgcc cgtgacttac tggccgataa acagcggcga atgccattac ttccggcgct
    16741 gaaaagttat ctgtcactaa agtctccggc gctacgcaat gccggacgac tcagtgtgat
    16801 gttaagcgtt gccagcctga tgggcaccgc gctgcatctg ccgaagtcgt actggatcct
    16861 gatgacggta ttgctggtga cacaaaatgg ctatggcgca acccgtctga ggattgtgaa
    16921 tcgctccgtg ggaaccgtgg tcgggttaat cattgcgggc gtggcgctgc actttaaaat
    16981 tcccgaaggt tacaccctga cgttgatgct gattaccacc ctcgccagct acctgatatt
    17041 gcgcaaaaac tacggctggg cgacggtcgg ttttactatt accgcagtgt ataccctgca
    17101 actattgtgg ttgaacggcg agcaatacat ccttccgcgt cttatcgata ccattattgg
    17161 ttgtttaatt gctttcggcg gtactgtctg gctgtggccg cagtggcaga gcgggttatt
    17221 gcgtaaaaac gcccatgacg ctttagaagc ctatcaggaa gcgattcgct tgattcttag
    17281 cgaggatccg caacctacgc cactggcctg gcagcgaatg cgggtaaatc aggcacataa
    17341 cactctgtat aactcattga atcaggcgat gcaggaaccg gcgtttaaca gccattatct
    17401 ggcagatatg aaactgtggg taacgcacag ccagtttatt gttgagcata taaatgccat
    17461 gaccacgctg gcacgggaac accgggcatt gccacctgaa ctggcacaag agtatttaca
    17521 gtcttgtgaa atcgccattc agcgttgtca gcagcgactg gaatatgacg aaccggggag
    17581 ttctggcgat gccaatatca tggattcgcc ggagatgcag ccgcacgaag gcgcggcagg
    17641 tacgctggag cagcatttac agcgggttat tggtcatctg aacaccatgc acaccatttc
    17701 gtcgatggca tggcgtcagc gaccgcatca cgggatttgg ctgagtcgca agttgcggga
    17761 ttcgaaggcg taatgcaggc taaaccatcg gataaggcat tcacgccgca tccgacatct
    17821 tttgcctgat gcttcgtatt tacgccccaa ccaccttcgc caccgcgtgg gcgaaacgtt
    17881 gcatcccttc atcgatatcc gcatcttcca ccaccagcga cggtgcaaaa cgcatcacat
    17941 ccggtccggc attcagcacc attacgccag cccctgcgcc cgcatacagg aaatcacgcg
    18001 cccgaccttt gaactgtggc ttaagctccg cgccaatcaa cagccccata ccgcgaatat
    18061 cgctaaacac atcgtactgc tgatcgatct tctgcaaatg gtcaacaaaa cgctggcgtt
    18121 tcgcctgaat gccttccagc acttcagggg tattgatgat atcaaacgcc gcgcccgcta
    18181 ctgcacaggc cagaggatta ccgccgtagg tggaaccgtg agaaccagga tgaaacgcag
    18241 aagcaatttc cgccgtggtc agcatggcgc taatcgggaa gccgccgcct aacgctttcg
    18301 cagaggtcag aatatccggc gtcacgccgt agtgcatgta agcaaacaaa tcgccggtcc
    18361 gccccatccc gcactgcact tcatcaaaca ccaataatgc ctgatgttga tcgcacagct
    18421 cgcgcaagcc ctgcaaaaac tctggcgtcg cagccgtcac gccgccctcg ccctggatcg
    18481 gctcaaccac caccgcacag gtgtgatcat ccatcactgc tttcactgcg tggagatcgt
    18541 taaagggaac gtggatgatg tctgccggtt tcggcccaaa gccgtcggaa tattttggct
    18601 gcccacccac cgaaacggta aacagcgagc gaccatgaaa agcgttatgg aaggcaataa
    18661 ttttggtttt gaacgggcta tgacgcacac aggcgtaatg acgtgccagt ttaaaggcgg
    18721 tttcgttagc ttccgtgccg gagttcataa acaccacgcg ttcggcaaac gttgcctcaa
    18781 tcagtttacg cccaagacgc agcgccggtt cattggtgaa aacgttactg atatgccaca
    18841 gagtttcgcc ctgggttttt aacgcgttca ccagcgcagg atggcaatgg cccaacgccg
    18901 taactgcaat gccacccgcg aaatcgacat actccttgcc ttgctgatcc cagattcggc
    18961 tgccctgacc ttttaccgga ataaactctg ccggagcata aatcggcagg atcacttcat
    19021 cgaaagtcgc gcgtgtaatt gctgtttgtt caattgccat ctcataatca ccctgttacg
    19081 cataaataaa tgtgaaatta taatcacaaa atatgcataa aaaatcacca aatggcaatc
    19141 agaaatcagc gatgcaggaa attagccagc agttgatgtc cttgttcgct aagaatactt
    19201 tctggatgga actgcacacc ttccagatcc cactggcgat ggcgaatccc cataatctcg
    19261 cgggtttcgc tccaggccgt cacgtcaaag cacgctggta atgagtcagg ttccaccacc
    19321 agcgaatggt agcgtgtcac ggtaagtgga tttgccagcc cccgaaatac gccctcaccg
    19381 ttatgtgtaa tcggcgaggt tttgccgtgc atgacctttg cggcgcgcac aactttaccg
    19441 ccaaatgcct gcgccattgc ctgatgaccg aggcagacgc caagaatcgg caagcgcccg
    19501 gcatagtggc gaataacgtc aagggagatc ccggcttcat ctggcgtaca ggggccaggt
    19561 gagatgacaa ttttttgtgg tttaagggcg tcgatatccg ccagcgtcaa cgcatcgttg
    19621 cgcttaacca gcacatccgc ccccagttca caaaagtact ggtagaggtt ccaggtaaaa
    19681 gaatcgtagt tatctataag caggatcatg gcggctccgg tacgaaagaa ccacgctatt
    19741 ttactcagat tccccggctt cgcttaccac tttgctaaat atcatctgca gcgcggtgag
    19801 atcccccatt gccccactct gatttgcctg attccaggct tctttttcga taccctgcca
    19861 gctcagttga tatccggcat gaatcgccag ttgctcgaag aagatccgct gtgccagtcc
    19921 gcttcccaca cggaagggat gcagcacgtt gatttcacaa tagtaatgcg ccagccgctc
    19981 gacgaacttc gctttctcca ggccaaccag ataaccttct tcctccagat cctgcatcag
    20041 ggcattgccc tctttttcga tataagcaaa gtggcagaac ggcgtatcgc cctgataaat
    20101 atcaacttca cgcagttgcc ccgcccagtc gaaaatatcc tgatacagct ggcgatggat
    20161 agtgcgcaaa tgcggtaaac cgcgcaccag cggaccaagc tcaatggtcg cagcacgcag
    20221 cgccgtcatt tcgtaagcgg cctgttccag ccgctgctgc tggtggatgt tcagccggtt
    20281 acgcatgata tcaaggccag gataaagata cggatcgcgc ccttcgccga atttatcgct
    20341 catagtgcct cctcagctct tcaaggcgcg ctaaagcctc tgcggcagta agagtgacta
    20401 aaggcatctc gacgccttca agacggcgac tggcctggaa attacgatta cgctgaagct
    20461 cccagagacg ggacttttgc ttatcggtga gtttcttcac ttgatgcctc cctgaacgtg
    20521 tccatttgcc acaagtataa gcggcaaatc cgggttacgc cgggagagca gaagcgcggg
    20581 caagattgcc cgcgcgaaaa atcattacgg caggacttta gcggaaagga taactaccgg
    20641 ttttgacggc acattctggt acggaccaac gtcatgagtc ggcacctggg aaatcttatc
    20701 ggcaacgtcc atgcctttca ccactttacc aaataccgcg taaccgaaat cacgctgacc
    20761 atggtcaagg aaggcgttat cggcaacgtt gataaagaac tggctggtgg cgctgtcttt
    20821 gtcagcggta cgcgccatcg cgatggtgcc acgcgtgttg cgcaggccgt tatcggcttc
    20881 atttttgatt ggcgggtttg gttttttctg ctgcatctgc tcggtgaaac cgccgccctg
    20941 aatcataaag ccaggaatga cgcggtgaaa ggtagtgttg ttataaaaac cgctgttcac
    21001 ataatcgaca aagttttgca cagacactgg cgctttttgt ttatccagct ccagttcgat
    21061 gttaccagct gaggttgtca acaatacgtg cgggtcccct ttcgctgcca ttgctgcggg
    21121 agaaagagca gaaagagcga aaacagcagc catcgccgcc agggtcgatt tgaacatgag
    21181 atttccttaa caaacagagc agaaaaaaag caagtgaaga gattctaaat agccttcaag
    21241 aacaaggcca tccctttacc taattttacg tatctgaaat atatgtaacc tgacgatcac
    21301 tttttattcc gtgatcaaaa tcacctctta aaatgcaatt tagcaaccga ttgcaataaa
    21361 acatttaaac agatcacgaa atcacctaaa atcgcccgct cgcggcatat cccgctatgc
    21421 cattttattt ttgaacgcag gccaatcatg actaacagca atcgcatcaa gctcacatgg
    21481 attagctttc tctcctacgc actgactggt gcgttggtta ttgtcaccgg gatggtgatg
    21541 ggaaatatcg ccgattattt caatctgcct gtttccagta tgagtaacac cttcaccttc
    21601 ctcaacgccg gcattttaat ctctatcttc ctcaacgcct ggctgatgga aatcgtcccg
    21661 ttgaaaacgc agttacgttt tggctttctc ctgatggtgc tggcggttgc cggtttgatg
    21721 ttcagccaca gcctggcgct gttctcggcg gcgatgttca ttctcggggt ggtcagcggc
    21781 atcaccatgt cgattggtac attcctggta acacaaatgt atgaagggcg tcagcgcggt
    21841 tcccgcctgt tatttaccga ctccttcttc agtatggctg ggatgatttt cccaatgatc
    21901 gccgcgtttc tactggcgcg cagcattgag tggtactggg tttatgcctg catcgggctg
    21961 gtgtatgtcg ctatttttat tctgaccttc ggctgtgagt tcccggcgct gggcaaacat
    22021 gcgccaaaaa cggatgctcc ggtagagaaa gaaaagtggg ggatcggcgt actgtttctc
    22081 tctgttgcgg cgctgtgcta catcctcggt cagttaggtt ttatctcctg ggtgcctgag
    22141 tatgccaaag gcctgggcat gagcctgaac gacgcgggca cgctggtgag taacttctgg
    22201 atgtcataca tggtcggcat gtgggcgttc agctttattc ttcgcttctt tgatttgcaa
    22261 cgcattctga ccgtactggc tggtctggct gcgattctga tgtacgtctt taacaccgga
    22321 acaccagcac atatggcgtg gtcaattctc gctctgggct tcttctccag cgcgatctat
    22381 accaccatca tcaccctggg ttcacagcag accaaagtac cgtcgccaaa actggttaac
    22441 tttgtcctga cctgcggaac catcggtact atgttgacct ttgtggttac cggcccgatt
    22501 gttgaacata gcggtccgca ggcggcactg cttacagcaa acggtctgta cgctgtcgtc
    22561 tttgtgatgt gcttcctgtt aggtttcgtc agccgtcacc gtcagcataa caccctgacc
    22621 tctcattaat tgctaatgcc ggacggcact atcgtcgtcc ggccttttcc tctcttcccc
    22681 cgctacgtgc atctatttct ataaacccgt tcattttgtc tattttttgc acaaacatga
    22741 aatatcagac aattccgtga cttaagaaaa tttatacaaa tcagcaatat accccttaag
    22801 gagtatataa aggtgaattt gatttacatc aataagcggg gttgctgaat cgttaaggta
    22861 ggcggtaata gaaaagaaat cgaggcaaaa atgagcaaag tcagactcgc aattatcggt
    22921 aacggtatgg tcggccatcg ctttatcgaa gatcttcttg ataaatctga tgcggccaac
    22981 tttgatatta ccgttttctg tgaagaaccg cgcatcgctt atgaccgcgt acacctctcg
    23041 tcttacttct ctcaccacac cgccgaagag ctgtcgctgg tgcgcgaagg cttctacgag
    23101 aaacacggca tcaaagttct ggtcggcgaa cgcgctatca ccatcaaccg tcaggagaag
    23161 gtgattcact ccagcgccgg acgtaccgtt ttttatgaca agctgatcat ggcaaccggt
    23221 tcctacccgt ggatcccgcc aatcaaaggt tctgatactc aggactgctt tgtctatcgc
    23281 accattgaag acctcaacgc cattgaatcc tgcgcccgtc gcagcaagcg cggtgccgtt
    23341 gttggtggcg gcctgttagg tctggaagcc gctggcgcgc tgaaaaactt aggtattgaa
    23401 acccacgtta tcgaatttgc ccctatgctg atggcggaac agcttgatca gatgggtggc
    23461 gagcagctgc gtcgcaaaat cgaaagtatg ggcgtgcgcg ttcacaccag caaaaacacc
    23521 cttgagattg tgcaggaagg tgtcgaagcg cgtaaaacca tgcgttttgc cgacggcagc
    23581 gaactggaag tcgactttat cgtcttctct accggtatcc gtccgcgcga taagctggca
    23641 acccagtgtg gtctggacgt tgctccgcgt gggggtattg tcattaatga ttcctgccag
    23701 acttccgatc cggatatcta cgccatcggt gaatgcgcaa gctggaacaa ccgtgtattt
    23761 ggtctggtag caccaggcta caaaatggcg caggtcgccg ttgaccatat tctcggtagc
    23821 gaaaacgcct ttgaaggtgc tgaccttagc gccaagctga aactgctggg cgtagacgta
    23881 ggcggtattg gtgatgcgca cggtcgcacg cctggcgcac gtagctacgt ttacctcgac
    23941 gaaagtaaag agatctacaa acgcctgatt gtcagcgaag acaacaaaac cctgctcggt
    24001 gcggtactgg tgggcgatac cagcgactac ggtaacctgc tgcaactggt gctgaacgct
    24061 atcgaactgc cggaaaaccc ggattccctg atcctgccag cacactctgg tagcggcaag
    24121 ccgtctatcg gtgttgataa actgccggac agcgcgcaaa tctgctcctg cttcgacgtc
    24181 accaaaggtg atctgattgc tgccatcaac aaaggctgcc acaccgttgc ggcgctgaaa
    24241 gctgaaacca aagcgggtac tggctgcggt ggctgtatcc cgctggtcac tcaggtactg
    24301 aacgcggaac tggcgaaaca gggcatcgaa gttaacaaca acctgtgcga acactttgct
    24361 tattcgcgtc aggaactgtt ccatttgatc cgcgttgaag gcattaaaac cttcgaagaa
    24421 ctgctggcga aacacggcaa aggctacggt tgtgaagttt gtaaaccaac cgtcggttcg
    24481 ctgctggcct cctgctggaa cgaatacatt ctgaagccgg aacatactcc gctgcaggat
    24541 tctaacgaca acttcctcgc taacatccag aaagacggaa cctactcggt gatcccgcgc
    24601 tctccgggcg gtgaaatcac cccggaagga ctgatggcag tgggtcgtat cgcgcgtgaa
    24661 tttaatctct acaccaaaat caccggctct cagcgcctgg cgatgtttgg cgcacagaaa
    24721 gacgatctgc cggagatctg gcgtcagctg attgaagctg gcttcgaaac cggtcatgcc
    24781 tatgcgaaag cactacgtat ggcgaaaacc tgcgtgggta gcacctggtg ccgctacggc
    24841 gttggcgaca gcgtcggcct cggcgtggaa ctggaaaacc gctacaaagg catccgtacg
    24901 ccgcacaaaa tgaagttcgg tgtctccggc tgtacccgtg aatgttcaga agctcagggt
    24961 aaagacgtgg gtattatcgc cactgaaaaa ggctggaacc tgtatgtttg cggtaacggc
    25021 ggcatgaaac cgcgtcatgc ggatctgctg gcagcggata tcgatcgcga aacgctgatc
    25081 aaatatctcg accgcttcat gatgttctac atccgtaccg ccgacaaact gacgcgtacc
    25141 gcgccgtggt tagaaaacct cgaaggcggc atcgattatc tgaaagcggt gatcattgac
    25201 gacaaactgg ggctgaacgc acatctggaa gaagagatgg cgcgcctgcg tgaagcggta
    25261 gtgtgtgagt ggactgaaac ggtcaataca ccgtccgcgc agactcgctt caaacacttc
    25321 atcaacagcg acaagcgtga cccgaacgta cagatggtgc cagagcgcga acagcaccgt
    25381 ccggcaacgc cgtatgaacg tatcccggta actctggtgg aggacaacgc atgagccagt
    25441 ggaaagacat ctgcaaaatc gatgacatcc tgcctgaaac cggcgtctgc gcgctgttag
    25501 gtgacgagca ggtagcaatt ttccgcccgt atcacagcga tcaggtgttt gcgatcagca
    25561 acatcgaccc gttcttcgag tccagcgtgc tgtcacgcgg gctgattgcg gaacaccagg
    25621 gcgagctgtg ggtcgccagc ccgctgaaaa aacagcgttt tcgcttaagt gatggcttgt
    25681 gcatggaaga cgaacagttt tccgtcaaac attacgaagc acgagtgaaa gacggcgtgg
    25741 tgcagctgcg cggttaatgt tttaacggga ggcgcaatgc ctcccctttt tgcatggtcc
    25801 tgtaatgacc ttcggtatat tgcaggacat tttttaaact ttttgtttta tttttttgtt
    25861 tttatttttt aaaggataat caaatgttta cagacactat taataagtgt gcggctaacg
    25921 ctgcgcgcat tgcacgcctg tcggcaaata acccgctcgg cttttgggtc agctccgcca
    25981 tggcgggcgc gtatgtgggt cttgggatca tcttgatttt cacgctcggt aatttgctcg
    26041 acccgtccgt acgtccgctg gtgatgggcg cgacctttgg tatcgcctta acgctggtga
    26101 ttatcgccgg ttctgaactg ttcaccggac acaccatgtt cctcaccttt ggggtaaaag
    26161 cgggcagcat cagccacggg caaatgtggg caatcctgcc gcaaacctgg ctgggtaacc
    26221 tggtcggttc cgtcttcgtt gccatgctct atagctgggg cggcggtagc ctgctgccgg
    26281 tagataccag catcgttcac tccgtcgcgc tggctaaaac cactgcaccg gcaatggtac
    26341 tgttcttcaa aggtgcattg tgtaactggc tggtttgcct ggcaatctgg atggcgctgc
    26401 gcactgaagg ggcggcgaaa tttatcgcta tctggtggtg tctgctggca tttatcgcgt
    26461 ctggctacga gcactctatc gctaacatga cgctgttcgc gctctcctgg ttcggcaacc
    26521 acagcgaagc ctacacgctg gcgggtattg gtcataacct gctgtgggtg acgctgggta
    26581 atactttatc aggtgccgta ttcatgggat tgggttattg gtatgctacg ccgaaagcga
    26641 atcgtccggt tgcggacaaa tttaatcaaa ctgaaacggc taccggttaa ttactaaggg
    26701 gtttttacgt ggatcatttg cctatatttt gccaattacg cgatcgcgac tgtctgattg
    26761 tcggcggtgg tgatgtcgcg gaacgcaaag caaggttgct gttagacgca ggcgctcgct
    26821 taacggtgaa tgcattagcg tttattccac agttcaccgc atgggcagat gcaggcatgt
    26881 taaccctcgt cgaagggcca tttgatgaaa gccttctcga cacctgctgg ctggcgattg
    26941 cagcgacgga tgatgacgcg cttaaccagc gcgtcagcga agccgctgaa gctcgtcgca
    27001 tcttctgtaa cgtggtcgat gcgccgaaag ccgccagctt tattatgccg tcgattattg
    27061 accgctcacc gctcatggtc gcggtctcct ctggcggcac ctctccggtt ctggcgcgcc
    27121 tgttgcgcga aaaactcgaa tcactgctgc cgttgcatct gggccaggtg gcgaaatatg
    27181 ccgggcaatt acgcgggcga gtgaaacaac agttcgccac gatgagtgag cgtcgccgtt
    27241 tctgggagaa attgttcgtt aacgaccgcc tggcgcagtc gctggcaaac aacgatcaga
    27301 aagccattac tgaaacgacc gaacagttaa tcaacgaacc gcttgaccat cgcggtgaag
    27361 tggtgctggt tggtgcaggt ccgggcgatg ccgggctgct gacgctgaaa ggactgcaac
    27421 aaattcagca ggcagatgtg gtggtctacg accgtctggt ttctgacgat attatgaatc
    27481 tggtacgccg cgatgctgat cgcgttttcg tcggcaaacg cgcgggatac cactgtgtac
    27541 cgcaggaaga gattaaccag atcctgctgc gggaagcgca aaaaggcaaa cgcgtggtgc
    27601 ggctgaaagg tggcgatccg tttatttttg gccgtggtgg cgaagagctg gaaacactgt
    27661 gcaacgcggg tattccgttc tcggtggttc cgggtattac cgcagcttct ggttgctctg
    27721 cctattcggg tattccactc acgcatcgcg attatgccca gagcgtacgc ttaattaccg
    27781 gacacttaaa aaccggtggc gagctggact gggaaaacct ggcggcagaa aaacagacgc
    27841 tggtgttcta tatggggttg aatcaggccg cgactattca gcaaaagctg attgaacacg
    27901 gtatgcctgg cgaaatgccg gtggcaattg tcgaaaacgg aacggcagtc acgcagcgcg
    27961 tgattgacgg tacgctcacg caactcggtg aacttgctca gcaaatgaac agtccatcgc
    28021 taattattat tggtcgggtt gttggcctgc gcgataaact gaactggttc tccaaccatt
    28081 aatttaaccc gggccagaga attctggcct tctt
//
LOCUS       DAPGWB010000051        27958 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.051, whole genome shotgun sequence.
ACCESSION   DAPGWB010000051 DAPGWB010000000
VERSION     DAPGWB010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 27958)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27958)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27958
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.051"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            45..662
                     /gene="hyfA"
                     /locus_tag="RHX79_002101"
     CDS             45..662
                     /gene="hyfA"
                     /locus_tag="RHX79_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311370.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfA"
                     /protein_id="HDV2197272.1"
                     /translation="MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTST
                     LTAPVVCHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGS
                     RPVNAPAQYVFQAEGSLKDGEENVPPQHALLRWEPGVQTVAVKCDLCDFLPEGPACVR
                     ACPNQALRLITDDSLQRQMKEKQRLAASWFANGGEDPLSLTQEQR"
     gene            662..2680
                     /gene="hyfB"
                     /locus_tag="RHX79_002102"
     CDS             662..2680
                     /gene="hyfB"
                     /locus_tag="RHX79_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
                     /protein_id="HDV2197273.1"
                     /translation="MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGV
                     IGIISGITQLHAGVTLVARFATPFDFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTY
                     MREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS
                     INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGF
                     GAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWG
                     ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLT
                     VVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGC
                     LAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM
                     YGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTN
                     TPPVTVASGIALVPGTFHTRVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAW
                     ACGYGWENAMAPSGNGVMQPLRVVFSALFLLRQQLDPTLRLNKGFAHVTARAQSTEPF
                     WDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV"
     gene            2691..3638
                     /gene="hyfC"
                     /locus_tag="RHX79_002103"
     CDS             2691..3638
                     /gene="hyfC"
                     /locus_tag="RHX79_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfC"
                     /protein_id="HDV2197274.1"
                     /translation="MRQTLYDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRG
                     PGIWQDYRDIHKLFKRQEVAPISSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGG
                     GDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIA
                     GSTHIEMISNTLATGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTE
                     YSGAGLALAKWGLGLKQVVMAALFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFV
                     LASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL"
     gene            3655..3765
                     /locus_tag="RHX79_002104"
     CDS             3655..3765
                     /locus_tag="RHX79_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000429114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoin racemase"
                     /protein_id="HDV2197275.1"
                     /translation="MENLALTTLMLPFIGALVVSFSPQRRAAEWGFCSPH"
     gene            3741..5093
                     /gene="hyfD"
                     /locus_tag="RHX79_002105"
     CDS             3741..5093
                     /gene="hyfD"
                     /locus_tag="RHX79_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005136530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfD"
                     /protein_id="HDV2197276.1"
                     /translation="MGVLFAALTTLCMLSLISAFYQADKVAVTLTLVNVGDVALFGLV
                     IDRVSTLILFVVVFLGLLVTIYSTGYLTDKNREHPHNGTNRYYAFLLVFIGAMAGLVL
                     SSTLLGQLLFFEITGGCSWALISYYQSDKAQRSALKALLITHIGSLGLYLAAATLFLQ
                     TGTFVLSAMSELHGDARYLVYGGILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLHAA
                     SMVKVGVYIFARAIIDGGNIPHVIGGVGMVMALVTILYGFLMYLPQQDMKRLLAWSTI
                     TQLGWMFFGLSLSIFGSRLALEGSIAYIVNHAFAKSLFFLVAGALSYSCGTRLLPRLR
                     GVLHTLPLPGVGFCVAALAITGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMILLMI
                     ESVASFAWFIRWFGRVVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIAATWLQ
                     "
     gene            5105..5755
                     /gene="hyfE"
                     /locus_tag="RHX79_002106"
     CDS             5105..5755
                     /gene="hyfE"
                     /locus_tag="RHX79_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 membrane subunit"
                     /protein_id="HDV2197277.1"
                     /translation="MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSI
                     FATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLA
                     ALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMEN
                     GSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG"
     gene            5760..7340
                     /gene="hyfF"
                     /locus_tag="RHX79_002107"
     CDS             5760..7340
                     /gene="hyfF"
                     /locus_tag="RHX79_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HDV2197278.1"
                     /translation="MSYSVMFALLLLTPLLFSLLCFACRKRGLSATCTVTVLHSLGIT
                     LLVILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEV
                     AHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS
                     SLESAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLI
                     LLAFVFVLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIII
                     CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVALGIGGP
                     LGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGAL
                     ALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ
                     AVNRGNLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW
                     HDFLPSGTASVSEKHSER"
     gene            7330..9045
                     /gene="hyfG"
                     /locus_tag="RHX79_002108"
     CDS             7330..9045
                     /gene="hyfG"
                     /locus_tag="RHX79_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfG"
                     /protein_id="HDV2197279.1"
                     /translation="MNVNSSSNRGEAILAALKTQFPGAVLDEERQTPEQVTITVKINL
                     LPDVVHYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSR
                     EFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRL
                     RPEPTTDSETYAFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYV
                     HRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSI
                     LLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGG
                     VRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIARDYSPV
                     GPLIRGSGFARDLRFDHPYADYGNIPKTLFTFTGGDVFSRMMVRVKETFDSLAMLEFA
                     LDNMPDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANW
                     PVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVDVRKRQSKTVPYKEIERYGIDRN
                     RSPLK"
     gene            9055..9600
                     /gene="hyfH"
                     /locus_tag="RHX79_002109"
     CDS             9055..9600
                     /gene="hyfH"
                     /locus_tag="RHX79_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit H"
                     /protein_id="HDV2197280.1"
                     /translation="MLKLLKTIMRAGTVTVKYPFAPLEVSPGFRGKPDLMPSQCIACG
                     ACACACPANALTIQTDDQQNSRTWQLYLRRCIYCGRCEEVCPTRAIQLTNNFEPTVTN
                     KADLYTRATFHLQRCSRCERPFAQQKTVALAAELLAEQQNAPQNREMLWAQASVCPEC
                     KQRATLLNDDTDVPLVAKEQL"
     gene            9597..10354
                     /gene="hyfI"
                     /locus_tag="RHX79_002110"
                     /pseudo
     CDS             9597..10354
                     /gene="hyfI"
                     /locus_tag="RHX79_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416984.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfI"
     gene            10347..10760
                     /gene="hyfJ"
                     /locus_tag="RHX79_002111"
     CDS             10347..10760
                     /gene="hyfJ"
                     /locus_tag="RHX79_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 assembly chaperone HyfJ"
                     /protein_id="HDV2197281.1"
                     /translation="MTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGV
                     IDCLNVAFPCPLTEYEDWLAQVEEEQARRKMLGVMNFGEIVIDASHTALLTRAFAPLA
                     DDATSVWQARSIQFIHLLDEIVQEPAIYLMARKIA"
     gene            10790..12802
                     /gene="hyfR"
                     /locus_tag="RHX79_002112"
     CDS             10790..12802
                     /gene="hyfR"
                     /locus_tag="RHX79_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HyfR"
                     /protein_id="HDV2197282.1"
                     /translation="MAMSDEAMFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPM
                     PPPFSPVQLIELHVLKSNFYYRYHDDGSDVTATTEYQGEMVDYSRHAVLLGSSGMAEL
                     RFIRTHGSRFTPQDCTLFNWLARIITPVLQSWLNDEEQQVALRLLEKDRDHHRVLVDI
                     TNAVLSHLDLDDLIADVAREIHHFFGLASVSMVLGDHRKNEKFSLWCSDLSASHCACL
                     PRNMPGDSVLLTQTLQTRQPTLTHRADDLFLWQRDPLLLLLASNGCESALLIPLTFGN
                     HTPGALLLAHTSSTLFSEENCQLLQHIADRIAIAVGNADAWRSMTDLQESLQQENHQL
                     SEQLLSNLGIGDIIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKEVIARAIHQLS
                     PRRDKPLVKINCAAIPASLLESELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGD
                     LPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRSDLFYRL
                     NVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRE
                     LENVIERAVLLTRGNNLNLHLNVRQSRLLPTLNEDSALRSSMAQLLHPTTPENDEEER
                     QRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRLGISVREVL"
     gene            12824..13555
                     /locus_tag="RHX79_002113"
     CDS             12824..13555
                     /locus_tag="RHX79_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001698835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter"
                     /protein_id="HDV2197283.1"
                     /translation="MRNKLSFDLQLSARKAAIAERIASHKIARSKVSVFLMAMSAGVF
                     MAIGFTFYLSVIADAPSSQALTHLVGGLCFTLGFILLAVCGTSLFTSSVMTVMAKSRG
                     VISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVAVLHCAEGKMHHTF
                     TESVSLGIMCNLMVCLALWMSYCGRSLCDKIVAMILPITLFVASGFEHCIANLFVIPF
                     AIAIRHFAPRPFGNWRTVAQTIFRH"
     gene            13447..13671
                     /locus_tag="RHX79_002114"
     CDS             13447..13671
                     /locus_tag="RHX79_002114"
                     /inference="COORDINATES: protein motif:HMM:NF013397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HDV2197284.1"
                     /translation="MYRQFVCDSVRHCHSPFCPTPLRQLAHSSADNFPALTVSHFITA
                     NLLPVMLGNIIGGAVLVSICYRAIYLRQEP"
     gene            complement(13709..14770)
                     /locus_tag="RHX79_002115"
     CDS             complement(13709..14770)
                     /locus_tag="RHX79_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDV2197285.1"
                     /translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLV
                     AIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRD
                     MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLL
                     TIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVL
                     EMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGT
                     EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
                     ATLIKAVIHAWPDGQIAQE"
     gene            14983..16446
                     /gene="bepA"
                     /locus_tag="RHX79_002116"
     CDS             14983..16446
                     /gene="bepA"
                     /locus_tag="RHX79_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-barrel assembly-enhancing protease"
                     /protein_id="HDV2197286.1"
                     /translation="MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTL
                     SIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINND
                     EINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLT
                     WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFD
                     PQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYL
                     AKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQP
                     LLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQP
                     QEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL
                     SSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM"
     gene            16467..16826
                     /gene="arsC"
                     /locus_tag="RHX79_002117"
     CDS             16467..16826
                     /gene="arsC"
                     /locus_tag="RHX79_002117"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311384.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HDV2197287.1"
                     /translation="MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAAT
                     LRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVAN
                     GKARIGRPPEQVLEIVG"
     gene            complement(16964..17710)
                     /gene="hda"
                     /locus_tag="RHX79_002118"
     CDS             complement(16964..17710)
                     /gene="hda"
                     /locus_tag="RHX79_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA inactivator Hda"
                     /protein_id="HDV2197288.1"
                     /translation="MVNFSRFCEILVEVSLNTPAQLSLPLYLPDDETFASFWPGDNSS
                     LLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVP
                     EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNL
                     GLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRT
                     LFMTLDQLDRASITAQRKLTIPFVKEILKL"
     gene            complement(17760..19049)
                     /gene="uraA"
                     /locus_tag="RHX79_002119"
     CDS             complement(17760..19049)
                     /gene="uraA"
                     /locus_tag="RHX79_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HDV2197289.1"
                     /translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
                     TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
                     LVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTII
                     ISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTL
                     YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVI
                     SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVM
                     GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGM
                     ALATIVGIGLSLIFKLISVLRPEEVVLDAEDADITDK"
     gene            complement(19135..19761)
                     /gene="upp"
                     /locus_tag="RHX79_002120"
     CDS             complement(19135..19761)
                     /gene="upp"
                     /locus_tag="RHX79_002120"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDV2197290.1"
                     /translation="MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEAT
                     ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMY
                     RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
                     AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
     gene            20086..21123
                     /gene="purM"
                     /locus_tag="RHX79_002121"
     CDS             20086..21123
                     /gene="purM"
                     /locus_tag="RHX79_002121"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDV2197291.1"
                     /translation="MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGG
                     FGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEP
                     LFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFC
                     VGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPL
                     ADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQW
                     PEVFNWLQTAGNVERHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIK
                     ASDSEQRVVIE"
     gene            21123..21761
                     /gene="purN"
                     /locus_tag="RHX79_002122"
     CDS             21123..21761
                     /gene="purN"
                     /locus_tag="RHX79_002122"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDV2197292.1"
                     /translation="MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLE
                     RARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAG
                     RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
                     TEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE"
     gene            21932..23998
                     /gene="ppk1"
                     /locus_tag="RHX79_002123"
     CDS             21932..23998
                     /gene="ppk1"
                     /locus_tag="RHX79_002123"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HDV2197293.1"
                     /translation="MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSN
                     NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEM
                     ARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVE
                     IIRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYD
                     ALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVL
                     REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFD
                     AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
                     GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVV
                     RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
                     NSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGM
                     CSLIPNLEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEV
                     ATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIK
                     SLEQPE"
     gene            24003..25544
                     /gene="ppx"
                     /locus_tag="RHX79_002124"
     CDS             24003..25544
                     /gene="ppx"
                     /locus_tag="RHX79_002124"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HDV2197294.1"
                     /translation="MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
                     VHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFL
                     KRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI
                     LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASG
                     TIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLA
                     ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQAR
                     RVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNS
                     DLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQ
                     ATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEEST
                     PEIAA"
     gene            complement(25583..27826)
                     /gene="pdeF"
                     /locus_tag="RHX79_002125"
     CDS             complement(25583..27826)
                     /gene="pdeF"
                     /locus_tag="RHX79_002125"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeF"
                     /protein_id="HDV2197295.1"
                     /translation="MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVF
                     LFYLPLALMISMMMFFSWAALPGITLGIFVRKYAELGFYETLSLTANFIIIIILCWGG
                     YRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMP
                     FNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFAL
                     WLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMI
                     SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDP
                     VVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLE
                     PGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRS
                     PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNH
                     FFLMAQPITGMRGDVYHEILLRMKGENDELIGPDSFLPVAHEFGLSSSIDMWVIEHTL
                     QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLDKYQIEAWQLIFEVTESNALT
                     NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD
                     YQIVASICHLARMKKMRVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI
                     EPIRESA"
BASE COUNT         6522 a         7265 c         7339 g         6832 t
ORIGIN      
        1 gcaatatgaa atgcaatgtt tcatatcatt ttcaaggagc cgacatgaac cgctttgtgg
       61 tggccgaacc actgtggtgt acaggatgta atacctgtct cgctgcctgt tcggacgtgc
      121 ataaaacgca aggtttacag caacacccgc gcctggccct ggcgaagacg tcaacactca
      181 ctgcccctgt cgtgtgtcat cactgtgagg aagccccttg cctgcaggtc tgcccggtta
      241 atgccatctc ccagagggat gatgcgatcc aactcaacga aagcctctgt attggctgca
      301 agctttgcgc cgtggtctgc ccatttggcg caatcagcgc ttcaggaagc cgtccggtga
      361 atgcccctgc gcaatatgtt tttcaggctg aaggctcact caaagacggc gaagaaaacg
      421 tgccgcccca acatgcattg ctgcgctggg aaccgggtgt ccagaccgtc gcggtgaaat
      481 gcgacctgtg tgatttcttg ccagaaggtc cggcctgcgt tcgcgcttgc ccgaatcagg
      541 cgttacggct gatcaccgac gatagcctgc aacgtcagat gaaagaaaaa cagcgccttg
      601 ccgcaagctg gtttgccaat ggcggggagg atcccctttc cctcactcag gagcaacgct
      661 aatggatgcc ctgcaattat taacctggtc gctgatcctc tatctgtttg ccagtctggc
      721 ttcgctgttt ttactcggtc tggacagact ggctattaag ctttccggca tcacatcgct
      781 ggtgggcggc gtgattggca ttatcagcgg aattacgcaa ttacatgcag gcgtaacttt
      841 agtcgcccgt tttgccaccc cttttgactt tgccgattta accctgcgaa tggatagcct
      901 ctcggcattt atggtgctgg ttatctcctt gctggtggtg gtttgttcgc tctattcatt
      961 gacttatatg cgcgaatacg agggcaaagg cgcggcggcg atgggcttct ttatgaatat
     1021 attcatcgca tcgatggttg ccctgctggt gatggacaac gctttttggt tcatcgtgct
     1081 gtttgaaatg atgtcgctgt cttcctggtt tctggtcatt gccaggcagg ataaaacgtc
     1141 aatcaacgct ggcatgctct acttttttat cgcccacgcc ggatcggtgc tgattatgat
     1201 cgccttcttg ctgatggggc gcgaaagcgg cagcctcgat tttgccagtt tccgcacgct
     1261 ttcactttct ccggggctgg cgtcggcggt gttcctgctg gccttcttcg gttttggcgc
     1321 gaaagccggg atgatgccgt tgcacagctg gttgccacgc gctcaccctg ccgcaccatc
     1381 gcacgcttcg gcgttgatgt ctggcgtaat ggtcaaaatc ggtattttcg gcatcctgaa
     1441 agtagcgatg gacctgctgg cgcaaacggg tttgccgctg tggtggggca ttctggtgat
     1501 ggcgatcggc gcaatctccg cgctcctggg cgtgctgtat gcgctggcgg aacaggatat
     1561 caaacggctg ctggcctgga gtaccgtcga aaacgtcggc attattttgc tggcagtcgg
     1621 tgtagcgatg gtcggtctgt cactgcacga cccgctgctc accgtggttg gactgctcgg
     1681 cgcactgttt catctgctca accatgcgct gttcaaaggg ctgctatttc tcggcgcggg
     1741 cgcgattatt tcgcgtttgc atacccacga catggaaaaa atgggggcac tggcgaaacg
     1801 gatgccgtgg acagccgcag catgcctgat tggttgcctc gcgatatcag ccattcctcc
     1861 gctgaatggt tttatcagcg aatggtacac ctggcagtcg ctgttctcac taagtcgtgt
     1921 ggaagccgta gcgctacaac ttgcgggtcc tattgctatg gtgatgctgg cagtcactgg
     1981 tgggctggca gtaatgtgct tcgtcaaaat gtacggcatt actttctgtg gtgcgccgcg
     2041 cagtacacac gctgaagagg cacaggaagt gccaaatacg atgatcgtcg ccatgctact
     2101 gctcgcggca ctctgcgtat taatcgcgct tagtgccagt tggctggcac cgaagataat
     2161 gcacattgcc catgcgttta ccaatacccc tcccgtcact gtcgccagcg gaatagcact
     2221 tgtacccggc acgtttcata cacgggtcac tccttcatta ctgttgctgt tactactggc
     2281 gatgcctttg ctgcctggcc tttactggct gtggtgtcgt tcgcgccgcg cagcgtttcg
     2341 tcgcacagga gatgcctggg catgcggcta cggctgggaa aatgcgatgg ccccgtcagg
     2401 caatggcgtg atgcagccgc tgcgtgtggt cttctctgcg ctatttcttc tacgacaaca
     2461 gctcgaccct acgctgaggc taaataaagg ttttgcgcac gtcaccgcca gggctcagag
     2521 cacagaaccc ttctgggatg agcgggtgat ccgccccatc gtgagcgcca cccaacggct
     2581 ggccaaagaa atacagcatc tgcaaagcgg cgactttcgt ctctattgcc tgtatgtggt
     2641 cgccgcactg gttgtgctgc taatcgctat tgccgtctaa ggaaatcacc attagacaaa
     2701 ctctttacga cggatatctg gtcatttttg cgttagcaca ggccgtgatt ctgctgatgc
     2761 taaccccgct ttttacgggt atttcccggc agatacgcgc gcgtatgcac tcccgccgcg
     2821 ggccggggat ctggcaggat tatcgcgata tccacaaact gtttaaacgc caggaagttg
     2881 cgcctatatc ttcaggtctg atgttccgcc tgatgccgtg ggtattaatc agcagcatgc
     2941 tggtgctggc gatggcccta ccacttttta ttaccgtttc cccttttgcg ggcggcggcg
     3001 atctgatcac ccttatctat cttcttgccc tgtttcgttt tttctttgct ctttccgggc
     3061 tggataccgg aagcccgttt gcgggagtcg gtgccagtcg cgagttgacg ctcggcattc
     3121 tggtcgaacc catgctcatt ctctcactgc tggtattggc gctgatagca ggttccacgc
     3181 atatcgagat gatcagcaat acgctggcaa cgggctggaa ctcgccgcta accaccgtac
     3241 tggcgttact ggcctgtggt tttgcctgct tcattgagat gggaaaaatt ccctttgatg
     3301 ttgctgaagc agaacaggaa ttacaggaag gcccgctgac cgaatattcc ggtgccgggc
     3361 tggcgctagc gaaatggggg ctggggctga aacaggtcgt gatggcagca ctgtttgtgg
     3421 ccctgtttct gccctttggg cgcgcgcaag aactttctct cgcctgcctg ctgacttcac
     3481 ttgtcgttac gctgctcaag gttttgctga tttttgtact ggcctcaatc gcagaaaaca
     3541 cgctggcacg cgggcgtttt ttactcattc accatgtgac ctggcttggc ttcagccttg
     3601 ctgcgcttgc atgggtcttc tggttaaccg gtctgtaagg agcactgacg gaatatggaa
     3661 aatcttgctc tgacgacgtt aatgctgcct tttatcggcg cactggtcgt ttcgttttcg
     3721 ccacaacgtc gggccgccga atgggggttt tgttcgccgc actgaccacg ctgtgcatgt
     3781 tgtcgctgat ctccgcgttt tatcaggccg ataaagttgc cgtcacgttg acgttggtca
     3841 acgtggggga tgtggcattg tttggcctgg tcattgatcg cgtgagtacg ctgattctgt
     3901 ttgtggtggt gtttctcggt ttgctggtca cgatctactc cacgggttat ctgacggata
     3961 aaaatcgcga acacccgcat aacggcacga atcgttatta cgcatttttg ctggtgttta
     4021 tcggcgcgat ggcgggactg gtactctcct cgacgctgct cggtcagttg ttgttttttg
     4081 aaattacggg cggctgctcc tgggcgttga tcagttatta ccagagcgat aaagcgcagc
     4141 gttcagcact aaaagcgttg cttatcaccc atatcggttc gttggggttg tatcttgccg
     4201 ccgccacgct gtttttgcag accggaacgt ttgtgcttag cgcgatgagc gagttacatg
     4261 gcgacgcacg ttatctggtt tatggcggga tcctgtttgc cgcgtggggg aaatcggccc
     4321 agctaccgat gcaagcgtgg ctaccggatg caatggaagc gccaacaccg atcagcgcct
     4381 atctccacgc cgcatcgatg gtgaaagtgg gcgtttacat ttttgcccgc gcaattatcg
     4441 acggcggcaa tatcccgcat gtgattggcg gcgttggcat ggtcatggca ctggtcacca
     4501 ttctttatgg ctttctgatg tatttgccac agcaggatat gaagcggttg ctggcctggt
     4561 cgaccatcac tcaacttggc tggatgttct tcggcttgtc gctctccatc ttcggctcgc
     4621 ggctggcgct ggagggtagc atcgcctaca tcgtcaacca cgcgttcgct aaaagcctgt
     4681 ttttccttgt agcaggtgcg ctgagttaca gctgcggcac gcgcttgttg ccgcgtctgc
     4741 gtggcgtatt gcacaccctg ccgttgccag gcgtgggttt ctgcgtggca gcgctggcga
     4801 ttaccggcgt gccgccgttc aacggcttct tcagtaaatt cccgctgttt gctgccggtt
     4861 ttgcgttgtc agtggagtac tggatcctgc tgcccgccat gattctgctg atgattgaat
     4921 cggtcgccag tttcgcctgg tttattcgct ggtttggtcg cgttgtgcct ggcaaaccga
     4981 gcgaggccgt cgccgatgcc gcaccgctgc cagggtcaat gcgcctggtg ttgattgtac
     5041 tgattgtgat gtcgctgatt tccagcgtaa tcgccgcgac ctggttgcag taaggagatg
     5101 atgaatgacc ggttctatga tcgtaaataa tctggcggga ctgatgatgc tgacatcgct
     5161 gtttgtgatt agcgtcaaaa gctatcgcct gtcatgcgga ttttacgcct gccagtcgct
     5221 ggtgctggtg tctattttcg ccactctctc gtgcctgttc gccgcagagc aactgctgat
     5281 ctggtccgcc agtgccttta tcaccaaagt gctgctggta ccgttaatca tgacttacgc
     5341 tgcacgaaat attccccaga acatcccgga aaaagcgtta ttcggtccgg caatgatggc
     5401 actgctcgcg gcgttaattg tcctgctttg cgcatttgtc gttcagcccg tgaagctacc
     5461 gatggctacc gggctgaaac cggcgctggc ggtagcgtta ggtcattttc tgcttggcct
     5521 gctgtgcatt gtcagccagc gcaatatcct gcggcaaatt tttggttact gcctgatgga
     5581 aaacggctcc catctggtgc tggcgcttct tgcctggcga gcaccggaac tggtggaaat
     5641 aggtatcgct accgacgcca tcttcgccgt cattgtgatg gtgttactgg caagaaaaat
     5701 atggcgtacc cacggcacgc tggacgtgaa caacttgacc gcgctgaagg gataatgaga
     5761 tgagttattc tgtgatgttc gctttactcc tgctcacgcc gctgcttttt tcgctgctct
     5821 gttttgcctg ccggaaacgg gggctctctg cgacttgtac ggtgactgta ttacatagct
     5881 tagggatcac actgctggtg attctggcac tctgggtggt ccaaactgcc gctgatgcag
     5941 gagaaatatt cgctgcggga ctgtggcttc atattgatgg tctgggcggt ttgttcctcg
     6001 ccattcttgg tgtgattggc tttctcaccg gtgtttactc gattggctac atgcgtcatg
     6061 aagtggcaca cggcgagctt tcacccgtta cactgtgcga ttactacggt ttcttccatc
     6121 tgtttttgtt caccatgctg ctggttgtta ccagcaataa cctgattgtg atgtgggcgg
     6181 cgatcgaagc caccacctta agctcggcgt ttctggtagg catttacggt cagcgttcat
     6241 cgctggaatc agcatggaag tacatcatta tttgtactgt tggtgtcgct tttggtctgt
     6301 tcggtaccgt gctggtatac gccaacgccg ccagcgttat gccgcaggca gaaatggcga
     6361 tattctggag cgaggttctt aagcaatcgt ccttgcttga cccaacatta atactgttgg
     6421 cctttgtgtt tgtgctaatt ggctttggta ccaaaaccgg gctatttccc atgcacgcct
     6481 ggctgccgga tgctcacagt gaagcgccga gtccggtcag cgccctgctc tccgccgtat
     6541 tgctgaactg cgcgctgttg gtgctgattc gctattacat cattatttgc caagccatcg
     6601 gcagcgattt ccccaaccgg ttgttgctca tcttcggcat gttgtcggtt gccgtggcgg
     6661 catttttcat tctggtacag cgggacatta agcgtctgct ggcgtactcc agcgtggaga
     6721 acatggggct ggtcgcggtg gcgctaggca ttggcgggcc gctgggaatt tttgccgcgc
     6781 tgctgcacat cttaaaccac agtctggcaa aaacgctgct gttctgcggt tccggcaatg
     6841 tactgctcaa gtacggcacg cgcgatctca acgtcgtctg tgggatgctc aaaatcatgc
     6901 catttaccgc cgtgctgttt ggcggcggtg cgctggcgct ggcagggatg ccgcccttca
     6961 acatttttct tagcgaattt atgaccatta ccgccggact ggcacgtaat cacctgctga
     7021 ttatcgtcct gctgttattg ctgttaacgc tggtgctggc gggcctggta cggatggcag
     7081 cgcgggtgtt aatggcgaaa ccgccgcagg ccgttaaccg gggtaatctc ggctggttga
     7141 ccacctcgcc aatggtgatt ctgctggtca tgatgctggc gatgggaacg catattccac
     7201 aacctgtcat caggatcctg gcgggcgctt ccactatagt cctctcaggg acgcacgacc
     7261 tgcctgcaca acgtagcacc tggcatgatt ttttgccttc aggcaccgca tctgtttcgg
     7321 agaaacacag tgaacgttaa ttcatcgtca aatcgtggcg aagcgattct cgccgccctg
     7381 aaaacgcagt tccccggcgc ggtgctggat gaagagcgac aaacgcctga acaggtcacc
     7441 attacggtga aaatcaatct gctgcctgac gttgtacatt atctttatta tcaacatgat
     7501 ggctggcttc cagtcctgtt tggcaacgac gagcggacac ttaacggtca ttacgcggtt
     7561 tattatgccc tttcaatgga aggggccgaa aaatgctgga tcgtggtgaa ggcactggtc
     7621 gatgccgaca gtcgggagtt tccgtcagtc acaccgcgcg tccctgccgc ggtctggggc
     7681 gagcgagaaa ttcgcgatat gtacgggctg attccggttg gcctgccgga tcagcgtcgc
     7741 ctggtgttgc ccgatgactg gccggaagat atgcatccgc tgcgcaaaga tgcgatggat
     7801 tatcgactgc gccctgaacc gacgacagat tccgaaacgt atgcgtttat caatgagggc
     7861 aacagcgatg cgcgggtgat ccctgtcggc ccgctgcata tcacctccga tgaaccgggt
     7921 cacttccgct tgtttgtgga tggcgagcaa attgtcgatg ctgattaccg cctgttttat
     7981 gtccatcgcg gcatggagaa actggcagaa acgcggatgg gctacaacga agtgaccttc
     8041 ttatcggacc gcgtgtgtgg gatttgcggt tttgcccaca gtgtggccta taccaattcg
     8101 gttgaaaatg cactggggat tgaggtgccg caacgagcac atactattcg ctcgattctg
     8161 ctggaagtcg aacggctaca cagtcatttg cttaaccttg gcctctcctg ccatttcgtt
     8221 ggttttgata ccggctttat gcaatttttc cgcgtgcggg aaaagtcgat gacgatggcg
     8281 gaattgctga tcgggtcgcg taaaacctac ggtctgaatc tgattggtgg tgttcgccgc
     8341 gatattctca aagagcaacg tctgcaaacg ctgaaactgg tgcgcgagat gcgcgccgac
     8401 gtgtcggagc tggtagagat gctgcttgcc acgccgaata tggaacaacg cactcagggc
     8461 attggcattc tcgaccgaca aatcgcccgt gattatagcc ctgtagggcc gctgatccgc
     8521 ggcagtggtt ttgcccgtga tttgcgcttt gatcacccct acgccgacta cggcaatatt
     8581 ccaaaaacac tgtttacctt taccggcggc gatgtcttct cccgcatgat ggtccgtgtc
     8641 aaagagacgt ttgattcgct ggcaatgctg gaatttgccc tcgacaacat gccggatacc
     8701 ccactgctga ccgaaggctt tagctataaa cctcacgcat tcgcgctggg ctttgttgaa
     8761 gcgccacgcg gcgaagacgt gcactggagc atgctcggtg ataaccaaaa attgttccgc
     8821 tggcgttgtc gtgccgccac ctacgccaac tggccggtgt tgcgttacat gctgcgcggc
     8881 aataccgttt ctgacgcacc gctgattatc ggtagccttg atccctgcta ctcctgtacc
     8941 gaccgtgtga cgctggtaga tgtgcgcaag cgccagtcaa aaaccgtgcc gtataaagag
     9001 atcgaacgct acggcattga tcgtaaccgt tcgccgctga agtaaggaca gaagatgctg
     9061 aagttactga aaactattat gcgcgccgga accgtgacgg tgaaatatcc cttcgcgcca
     9121 ctggaggtca gcccaggctt tcgcgggaaa ccggacctga tgcccagcca atgtattgcc
     9181 tgcggtgcct gcgcctgtgc ttgtccggca aatgcgctga ctatccagac cgacgaccag
     9241 caaaattcgc gcacctggca gctctatctg aggcgttgta tttactgcgg acgttgtgaa
     9301 gaagtgtgcc cgaccagagc catccagctt accaataact ttgaaccgac cgtcaccaat
     9361 aaagccgatc tctatacccg cgcgacgttc catctacaac gttgcagccg ttgcgaacgc
     9421 ccgtttgccc agcaaaaaac cgtcgcactg gctgctgaat tgttggcaga gcaacaaaat
     9481 gcgccacaaa accgcgaaat gttatgggcg caagcgagcg tctgcccgga gtgcaaacaa
     9541 cgcgcgacgc tgctcaacga cgatacagat gtaccgctgg tggctaagga gcagctatga
     9601 gtccagtgct tacacaacat gtcagccagc ccatcacgct ggacgagcaa acgcaaaaga
     9661 tgaagcagca tttgctacag gatatccgtc gctcggctta cgtttatcgc gtcgattgcg
     9721 gcggctgcaa cgcctgtgaa atcgaaattt ttgccgccat cacaccagta ttcgacgcag
     9781 aacgttttgg cattaaggtt atttcatcac cgcgtcacgc cgatattttg ttatttacag
     9841 gcgcagtcac ccgggcgatg cgtatgcctg cacttcgggc gtatgagtct gcccccgatc
     9901 ataaaatctg tgtttcctac ggcgcgtgcg gtgccggcgg cggattttcc acgatctcta
     9961 cagcgtctgg ggcggcagcg acaccattgt ccccattgat gtttggatcc ccggctgccc
    10021 gccaacaccg gccgccacca ttcacggttt cgccgtggcg ctcggtttgc tgcaacagaa
    10081 gattcacgcg gtggattatc gcgatcccac cggggtgact atgcaaccgt tgtggccgca
    10141 gatcccgcca tcacagcgta tcgccattga gcgagaagcg cggcggctgg cgggctatcg
    10201 tcaggggcga gaaatttgcg atcggctcct gcgccattta agcgacgatc ctacaggaaa
    10261 tcgggttaac acctggttgc gcgatgccga cgatccacgt ctcaatagta tcgttcagca
    10321 actctttcgc gtactccggg ggttacatga ctgaagagtg cggggaaatt gttttctgga
    10381 cgctgcgaaa aaagtttgtc gccagtagcg acgagatgcc ggaacacagc tctcaggtaa
    10441 tgtattactc gctggctatc ggtcatcacg ttggcgtgat tgattgtctg aatgtcgcct
    10501 tcccctgccc actgacggaa tacgaagatt ggcttgccca ggtcgaagag gagcaagccc
    10561 gacgtaagat gctgggggtg atgaattttg gtgagattgt tattgacgcc agccacaccg
    10621 ccctgttgac ccgggcattc gcgccactgg cggatgacgc gacgtctgtg tggcaggcgc
    10681 gtagcattca attcattcat ctgttggatg aaattgtgca ggaaccggcc atctatctga
    10741 tggccagaaa aattgcgtga gaaggatttc tcattaataa ggactgttga tggctatgtc
    10801 agacgaggcg atgtttgccc cgccacaagg aataacaatt gaagcggtaa acggaatgct
    10861 cgcggagcgg ttagcacaga aacacggtaa ggcgtcttta ttacgcgcct tcatcccgat
    10921 gccgccgccg ttcagcccgg tacaacttat tgaactgcat gttctcaaaa gcaacttcta
    10981 ttaccgctac catgatgatg gcagcgatgt gacggcaaca acagagtatc agggcgagat
    11041 ggtcgattat tcgcgtcacg ccgtccttct cggcagtagt ggaatggcgg agctacgctt
    11101 tattcgtacc cacggcagcc gttttactcc ccaggattgc acactgttta actggctggc
    11161 gcggataatc accccggttc tgcaatcatg gctcaatgat gaagaacagc aggtggcgct
    11221 gcgtttgctg gagaaagatc gcgatcatca tcgggtactg gttgatatta ctaatgcagt
    11281 gctgtcacat cttgatctcg acgatctgat cgctgacgtc gctcgtgaga tccatcattt
    11341 tttcggtctg gcttcagtca gtatggtact gggcgatcat cgaaagaacg agaagtttag
    11401 cctgtggtgc agcgatcttt ctgcctcaca ttgtgcgtgt ctgccacgca atatgcctgg
    11461 cgacagtgta ttgctgacac aaacgctaca aacccgacaa ccgaccttga cgcaccgtgc
    11521 agacgatctg tttctctggc aacgcgaccc gttattactc ttacttgcat ctaacggctg
    11581 cgaatctgcg ctccttatac cgcttacctt tggcaaccat acaccgggtg cattgttgct
    11641 ggcgcatacc tcttccactc tctttagtga ggaaaactgc cagctactac aacacatagc
    11701 cgatcgcatc gctattgccg ttggcaatgc cgatgcctgg cgtagcatga ccgatttgca
    11761 ggaaagtttg cagcaagaaa accaccagct tagcgagcag ctcctttcga atctgggcat
    11821 cggtgacatt atctatcaaa gccaggcaat ggaagaccta ctccagcagg tagatattgt
    11881 ggcgaagagc gacagtacgg tgttgatttg cggtgaaacc ggaaccggca aagaggtgat
    11941 cgccagagcg atccatcaac ttagcccgcg acgcgacaag ccgctggtca aaatcaactg
    12001 cgctgccatc cccgccagtc ttctggaaag tgagttattc ggtcatgaca aaggggcgtt
    12061 tactggtgcg attaataccc atcgtggtcg ttttgaaatt gccgatggcg gcacgttgtt
    12121 tctcgatgaa attggcgatc tgccgttaga acttcagcct aaattgctgc gcgtattgca
    12181 ggagcgggag attgagcgtc tcggcgggag tagaacgatc ccggtgaatg tcagagtcat
    12241 tgccgccacc aaccgtgatt tgtggcaaat ggttgaagat cgccagtttc gcagcgatct
    12301 cttttatcgc ctgaatgtct tcccactgga attgccgccg ctacgcgatc gtccggaaga
    12361 tatccctctt ttagcaaagc atttcacgca aaaaatggcg cgccatatga atcgcgcaat
    12421 tgacgcaatc ccgaccgagg cgctacgcca gttgatgtcg tgggattggc cgggcaacgt
    12481 gcgcgagctg gaaaacgtga ttgagcgggc ggtactgttg actcgtggta acaatctgaa
    12541 tttacatcta aatgtccgac aaagccgttt actgccgacg ctaaatgaag attcagcgct
    12601 tcgcagttca atggcgcagt tgctgcaccc gacgacgcca gagaatgacg aagaagaacg
    12661 tcagcgcatt gttcaggtat tgcgagaaac caatggcatt gttgccgggc cccgtggcgc
    12721 ggcgacacga ttagggatga agcgcaccac gctgctgtca cgaatgcagc gtctggggat
    12781 ctcggttcgc gaggtgttgt aatctgcttt tgcaggagta tgcatgagaa acaaactctc
    12841 tttcgacttg cagttgagcg ccagaaaagc ggcaatcgct gaacggattg cctcccataa
    12901 aattgcccgc agtaaagtgt cggtcttttt aatggcgatg tccgctggcg tgtttatggc
    12961 gatcggattt actttttacc tttccgttat cgccgatgcc ccgtcttcac aggcattaac
    13021 ccatctggtg ggcggccttt gctttacact cggctttatt ttgctggcgg tttgtggcac
    13081 cagcctgttc acctcgtcgg taatgacggt gatggcaaaa agtcggggcg ttattagttg
    13141 gcgaacttgg ctgattaacg cacttctggt ggcctgcggt aatctggcag gtattgcctg
    13201 tttcagtttg ttaatctggt tttccgggct ggtgatgagt gaaaacgcga tgtggggagt
    13261 cgcggtttta cactgcgccg agggcaaaat gcatcataca tttactgaat ctgtcagcct
    13321 cggcattatg tgcaatctga tggtttgcct ggcgctgtgg atgagttatt gcgggcgttc
    13381 attatgcgac aaaatcgtcg ctatgatttt gcccatcacc ctgtttgtcg ccagtggctt
    13441 tgagcactgt atcgccaatt tgtttgtgat tccgttcgcc attgccattc gccattttgc
    13501 cccacgcccc ttcggcaact ggcgcacagt agcgcagaca attttccggc actgacggtc
    13561 agccatttta ttaccgccaa tctgctcccg gtgatgctgg gtaatattat cggcggtgca
    13621 gtgctggtga gtatttgtta tcgggctatt tatttacgtc aggaaccctg aaaaatcagc
    13681 ccggcgaaac agttcgtcgg gctgaagatt attcttgcgc gatttgccca tcgggccagg
    13741 cgtggatcac ggctttgatc agcgtcgcca acggaatggc gaagaatacg ccccagaatc
    13801 cccacaaacc accgaagatc accaccgata aaataatcac cagcggatgc aggttaaccg
    13861 cttcggagaa caacaccggt actaacaggt tgccgtccag cgcctgaata atcagataca
    13921 ccgcgaagca gctccagaat tccgtgcctg caccaaactg gaatagcgcc acgccaacca
    13981 ccggaatggt caccacaaat gcgccaatgt acggaataag taccgagaag ccgaccagca
    14041 ccgccagcag cagcgaatag ttcagcccga agagtaagaa tcccagccag gtggcaatcc
    14101 ccaccacgat catctccagc actttgccgc ggatatagtt ggtgatttgt tgattcatct
    14161 ccttccacac ctgtcctgcc agtccacggt tacgcggcag cacccggcga acggcgttca
    14221 gcatctgctc tttgtctttc agcaggaaga agaccatcaa tggtaccagc accagataga
    14281 cggcaatggt cagcaaaccg accagcgagg cgagggaaat tttcaccacc gaatcgccca
    14341 tggtcagcat ccgactgcgc atattttcgg ccattgcatc aataatgccc gcatccatca
    14401 acgccggata gcggcgcggc aacgtggcgg caaagtcaga aagcttattg agcatccccg
    14461 gcatatcgcg aattaagtag atgccctgct gccaggcgat aggcagtacc acgaacgcca
    14521 tcaatagcaa tataccgacg aaaaccacca atacaatcga cgtcgcccag cggcgggagc
    14581 agccaataga ttgcaggcgc acggttggcc attccaacaa ataggccagc acaatagcca
    14641 ccaacagcgg agcaagcagg ccactaaaga aaaagataat gccaaatccg gcaactaaaa
    14701 taaccagcaa ggcaatcgct tccgggtcgc taaaacggcg gcgataccat tgcatcaaca
    14761 tttcgagcat aaagaccttc cctgaacctc aagagcggga ttgcgatccg caattgtatc
    14821 gaaatgtcac aaaaaagact tcgcttttta tgacggattc aggaaactga aaagtcattt
    14881 gagtggacta atcttcgccg ttacactcaa aggcggcgcg gtgggaacga tatttcacag
    14941 tatcggtcaa atgactatct ccagaaatac aggatagagg ttatgttcag gcagttgaaa
    15001 aaaaacctgg ttgcaaccct cattgctgcc atgaccattg gtcaggtagc cccggcgttt
    15061 gccgatagtg cagacacctt gccggatatg ggaacctccg caggaagcac gctttccatt
    15121 ggtcaggaaa tgcagatggg cgactattat gtccgccagc tacgcggcag cgcgccgtta
    15181 attaatgatc cactattaac gcagtacatt aattcactag gaatgcgtct ggtttcgcat
    15241 gccaattcgg ttaagacacc gtttcatttt tttctgatca acaacgacga aattaacgcc
    15301 tttgctttct ttggcggcaa cgtggtactg cactctgccc tgttccgtta ttccgataac
    15361 gaaagccaac tggcttcagt aatggcgcac gaaatctccc acgtcaccca acgtcacctg
    15421 gcgcgagcga tggaagatca acagcgcagc gcgccgctga cctgggtcgg cgcgttaggt
    15481 tctattttac tggcgatggc cagtccgcag gcggggatgg cagcgctgac cggtacactg
    15541 gcgggaacgc gccaggggat gatcagcttc acccagcaaa atgaacagga agcggatcgc
    15601 attggtattc aggtgctgca acgctcggga ttcgatccgc aggcgatgcc aaccttcctc
    15661 gaaaaattac tcgatcaggc gcgttactcc tcgcgcccgc cggaaatttt attgactcac
    15721 ccgttgccgg aaagtcgtct ggcagatgcc cgcaaccgtg ctaatcagat gcgaccgatg
    15781 gtggtgcagt cgtcggaaga tttctatctg gcgaaagcgc gcacactggg gatgtataat
    15841 tccggacgta accagctcac cagtgatttg ctggatgaat gggcgaaagg aaacgttcgt
    15901 cagcaacgag cggcgcaata tggtcgtgct ttacaggcga tggaagccaa taaatacgac
    15961 gaggcgcgta aaacgctgca accgttactg gcggcagaac ctggcaacgc atggtatctc
    16021 gatctggcta ccgatatcga tcttgggcaa aacaaagcca atgaggcaat caatcgcctg
    16081 aaaaatgccc gtgatttgcg caccaatccg gtgttgcagc tcaacctggc gaacgcttat
    16141 ctacaaggcg gtcaaccaca agaagcggcc aatattctga atcgctacac ctttaataat
    16201 aaagatgaca gcaacggctg ggatttactg gcacaggcgg aagccgcgct aaataaccgc
    16261 gatcaggagc tggctgcgcg agcagaaggt tatgcgctcg ccggacgact cgatcaggcc
    16321 atttcgctgt tgagtagcgc cagttcgcag gtgaaattag gcagcctgca acaagcgcgt
    16381 tacgatgcgc gcatcgacca gttgcgccag ctgcaggaac gctttaagcc ttataccaag
    16441 atgtaattcg cattaaagga agaacaatga ccaaacaggt aaaaatctac cataacccac
    16501 gctgttcaaa gagccgggaa acgctgaacc tgctgaaaga aaacggcgtg gagccagaag
    16561 tggtactcta ccttgagaca cccgccgatg cggcaacgct gcgcgatttg ctgaaaatgc
    16621 tggggatgaa tagcgcccgt gaattgatgc gccagaaaga ggatctttat aaagaactga
    16681 acctggctga cagttcgctt agcgaagagg cgctgattca ggcaatggtg gataatccga
    16741 agctaatgga gcgcccgatt gtggtcgcga atggcaaagc gcggattggt cgtccaccgg
    16801 agcaggtact ggaaatcgtg ggttaagatg tgctccatcg ctagttgaag cacattgccg
    16861 gatgcgacgc ttgccacgtc ttatccggcc tacgaatact atggattaac ttcgcgtagt
    16921 tcggataagg cgttcgcgcc gcatccgaca ataaacacct tatctacaac ttcagaattt
    16981 ctttcacaaa cggaatggtc agcttacgtt gcgcggtaat cgacgcacga tccaactgat
    17041 ccaacgtcat aaatagcgtg cgcatttctc tgtcgagccg cttcagcaag aaacgcccca
    17101 catcttccgg cagttcaaaa ccacgcaaac gcgcgcgtaa ctgtagcgcc tgcaacttat
    17161 cttcatcaga aagtggctgc aatttgtaga tctgccccca gtcgagtcgc gacgcgagat
    17221 ccggtaatcc cagattcaac tgccgcggtg gacgatcgcc ggtgatcaac aatcgtgttt
    17281 tgcccgattc cagaattcga ttgtagagat cgaaaatcgc catctcccac aactcatcgc
    17341 ctgcaataca ctcaatgttg tcgatacaga ccagcgacaa atgctccata ccgtcgagca
    17401 cttccggaac aaaccaggtg cgtttatcca gcgggacata gcccaccgca tcgccacgct
    17461 gcgacaattc cgcgcaagcc gcgtgcagca gatggctgcg ccccgcgcct tcgcgtgccc
    17521 agagatagat gtaaccgcta tgttcctgac gcagcacgtt ttgcagcgca gccagtaaag
    17581 aggagttatc ccccggccag aaacttgcaa aggtttcgtc gtcaggaaga taaagtggca
    17641 aagagagctg tgccggtgtg ttcagagata cctcaaccag gatttcacaa aatcgcgaga
    17701 agtttaccac agaatcccat gatgtttgaa ccgggcagca acactgcccg gtcggtacat
    17761 tatttgtctg ttatatccgc gtcttctgcg tccagcacca cttcttcagg gcgcagcaca
    17821 ctaatcagtt tgaagatcaa acttaagccg ataccgacga tggtcgccag cgccatacct
    17881 tttaactccg ccgcgccgat gtttaccttc gcgccactga cgccgatgat caaaatcacg
    17941 gaagtcagga tcaggttctg tgctttgttg taatccactt tcgattcgat caaaacacga
    18001 ataccggaag caccgatgac accataaagc agcagcgaaa cgccgcccat caccggcaat
    18061 gggatcatct ggatagcggc agccagttta ccgacacagg aaagcaggat agcgaaaatc
    18121 gccgccccac cgataaccca ggtactgtaa acacgggtga tcgccatcac gccaatgttt
    18181 tctccgtaag tggtatttgg cgtagagcca aagaagccgg agatcacggt cgacaggccg
    18241 ttagcaaaca tcgaacggtg cagacctgga tcgcgcagca gatctttttt gacgatatta
    18301 gccgttacta ccaggtgccc tacgtgttcg gcaataacca ctaacgccgc tggcagaata
    18361 gtcagaatgg caaaccactc gaagcgcggc gtatagaggg ttggcagcgc aaaccagtga
    18421 gcattaataa tcggcgtggt atcgacaatt cccattgcga aagagagcgc gtagcccacc
    18481 agcacgccaa ttaaaatcgg gataattgcc aggaaaccac gaaacagcac ggaacctaaa
    18541 accgtgaccg ccagggtggt aatagagatg atgatggttt tggagtctgg cgtttgccct
    18601 tcagccggga gtaaacccgc cataccggca gctacgcccg ccagctccag accgatgacg
    18661 gcaacgattg cgcccattgc cgcaggtgga aacagcacgt ccagccagcc ggtccccgct
    18721 ttcttcacga taaaagaaac caggcagaac agcacgccgc acataataaa gccgcccagc
    18781 gcgacttcat accctaacgg caacagtaac aataccggtg aaataaaggc aaagctggaa
    18841 ccaagataag ccggaatttt ccctttacag atgaagagat acagcagcgt tccaataccg
    18901 ttaaataaca gtacagtcgc cgggttaata tgaaataaga cgggcaccag gacggttgca
    18961 ccaaacatgg cgaacaaatg ttgcaaacta agcgggattg tctgtaaaag tggcggtctt
    19021 tcactcaccc cgatagcacg gcgcgtcata gtattatcct ctgtattatg tgttataggc
    19081 gctttactca aaaaaaagcc gactcttaaa gtcggcttta attattttta ttctttattt
    19141 cgtaccaaag attttgtcac cggcatcgcc gaggcccgga ataatgtatc cgtgctcgtt
    19201 cagtccctgg tcaatcgatg cggtatacag ttcgacgtcc gggtgcgctt tttccagcgc
    19261 agcgatacct tctggcgcag ctaccagcac cagaactttg atgctgctgc agcccgcttt
    19321 tttcagcagg tcgatggtcg cgataacgga accaccagtt gccagcattg ggtcaacgat
    19381 cagcgccata cgctcatcga tgttagaaac cagtttctgg aagtacggta ccggctccag
    19441 cgtttcttca ttacggtaca taccgacaac gctgatgcgc gcgctcggaa cattttccag
    19501 cacaccgtcc atcatcccca gaccggcacg cagaattggc acaacggtaa ttttcttacc
    19561 tttgatctgg tcgatttcta ccgggccgtt ccagccttcg atagttactt tttccgtttc
    19621 gaggtcggcg gtcgcttcgt aagtcagcag gctacccact tcggaagcga gttcgcgaaa
    19681 gcgcttggtg ctgatatctt gctcacgcat cagtcccagc ttgtgtttga cgagtgggtg
    19741 tttgacttcc acgatcttca tactctttct cctttgaggg gcagccacaa aaaaaatcga
    19801 cggattatac ctcctttctt caaggcggca atattctttt cgttgacttt agtcaaaatg
    19861 ataacggttt gagataaagt tattttatat tcaaatggtt atgaaagaag attattccat
    19921 ccgaaaacta acctttgccc tggcacaagt cttctttcgc cgcgcgtctg gggaaaagac
    19981 gtgcaaaaag gttgtgtaaa gcagtctcgc aaacgtttgc tttccctgtt agaattgcgc
    20041 cgaattttat ttttctaccg caagtaacgc gtggggaccc aagcagtgac cgataaaacc
    20101 tctcttagct acaaagatgc cggtgttgat attgacgcgg gtaatgctct ggttggaaga
    20161 atcaaaggcg tagtgaagaa aacgcgtcgt ccggaagtga tgggcggtct gggcggcttc
    20221 ggtgcgctgt gtgcattgcc gcaaaaatat cgtgaacccg tgctggtttc cggcactgac
    20281 ggcgtaggta ccaagctgcg tctggcaatg gacttaaaac gtcacgacac cattggtatt
    20341 gatctggtcg ccatgtgcgt taatgacctg gtggtgcaag gtgcagaacc gctgtttttc
    20401 ctcgactatt acgcaaccgg aaaactggat gttgataccg cttcagcggt gatcagcggc
    20461 attgcggaag gatgtctgca atcgggctgt tcactggtgg gtggcgaaac ggcagaaatg
    20521 ccggggatgt atcacggtga agattacgat gtcgcgggtt tctgcgttgg cgtggtagaa
    20581 aaatcagaaa tcatcgacgg ctctaaagtc agcgacggcg atgtgctgat tgcactcggt
    20641 tccagcggtc cgcactcgaa cggctattcg ctggtgcgca aaattcttga agtcagcggt
    20701 tgtgatccgc aaaccaccga acttgatggt aagccattag ccgatcatct gctggcaccg
    20761 acccgcattt acgtgaagtc agtgctggag ttgattgaaa aggtcgatgt gcatgccatt
    20821 gcgcacctga ccggcggcgg cttctgggaa aacattccgc gcgtattgcc agataatacc
    20881 caggcagtga ttgatgaatc ttcctggcag tggccggaag tgttcaactg gctgcaaacg
    20941 gcaggtaacg ttgagcgcca tgaaatgtat cgcaccttca actgcggcgt cgggatgatt
    21001 attgccctgc ctgctccgga agtggacaaa gccctcgccc tactcaatgc caacggtgaa
    21061 aacgcgtgga aaatcggtat catcaaagcc tctgattccg aacaacgcgt ggttatcgaa
    21121 taatgaatat tgtggtgctt atttccggca acggaagtaa tttacaggca attattgacg
    21181 cctgtaaaac caacaaaatt aaaggcaccg tacgggcagt tttcagcaat aaggccgacg
    21241 cgttcggcct tgaacgcgcc cgccaggcgg gtattgcaac gcatacgctc atcgccagcg
    21301 cgtttgacag tcgtgaggcc tatgaccggg agttgattca tgaaatcgac atgtacgcac
    21361 ccgatgtggt cgtgctggct ggttttatgc gcattctcag cccggcgttt gtctcccact
    21421 atgccgggcg tttgctgaac attcaccctt ctctgctgcc gaaatatccc ggattacaca
    21481 cccatcgtca ggcgctggaa aatggtgatg aagagcacgg tacatcggtg catttcgtca
    21541 ccgatgaact ggacggtggc ccggttattt tacaggcgaa agtcccggta tttgctggtg
    21601 atacggaaga tgacatcacc gcccgcgtgc aaacccagga acacgctatt tatccactgg
    21661 tgattagctg gtttgccgat ggtcgtctga aaatgcacga aaacgccgcg tggctggatg
    21721 gtcaacgtct gccgccgcag ggctacgctg ccgacgagta atgccccgta gttaaagcgc
    21781 cagctctgcc gctggcgttt ttcaattcac ctgtaaatcg caagctccag cagttttttt
    21841 cccccttttc tggcatagtt ggacatctgc caatattgct cgccataata tccaggcagt
    21901 gtcccgtgaa taaaacggag taaaagtggt aatgggtcag gaaaagctat acatcgaaaa
    21961 agagctcagt tggttatcgt tcaatgaacg cgtgcttcag gaagcggcgg acaaatctaa
    22021 cccgctgatt gaaaggatgc gtttcctggg gatctattcc aataaccttg atgagttcta
    22081 taaagtccgc ttcgctgaac tgaagcgacg catcattatt agcgaagaac aaggctccaa
    22141 ctctcattcc cgccatttac tgggcaaaat tcagtcccgg gtgctgaaag ccgatcagga
    22201 attcgacggc ctctacaacg agctgctgct ggagatggcg cgtaaccaga tcttcctgat
    22261 taatgaacgc cagctctccg tcaatcaaca aaactggctg cgtcattatt ttaagcagta
    22321 tctgcgtcag cacattacgc cgattttaat caatcctgac actgacttag tgcagttcct
    22381 gaaagatgat tacacctatc tggcggtgga aattatccgt ggcgatacca tccgttacgc
    22441 gctgctggag atcccatcag ataaagtgcc gcgctttgtg aatttaccgc cagaagcgcc
    22501 gcgtcgacgc aagccgatga ttcttctgga taacattctg cgttactgcc ttgatgatat
    22561 tttcaaaggc ttctttgatt atgacgcgct gaatgcctat tcaatgaaga tgacccgcga
    22621 tgccgaatac gatttagtgc atgagatgga agccagcctg atggagttga tgtcttccag
    22681 tctcaagcag cgtttaactg ctgagccggt gcgttttgtt tatcagcgcg atatgcccaa
    22741 tgcgctggtt gaagtgttac gcgaaaaact gactatttcc cgctacgact ccatcgtccc
    22801 cggcggtcgt tatcataatt ttaaagactt tattaatttc cccaatgtcg gcaaagccaa
    22861 tctggtgaac aaaccactgc cgcgtttacg ccatatttgg tttgataaag cccagttccg
    22921 caatggtttt gatgccattc gcgaacgcga tgtgttgctc tattatcctt atcacacctt
    22981 tgagcatgtg ctggaactgc tgcgtcaggc ttcgttcgac ccgagcgtac tggcgattaa
    23041 aattaacatt taccgcgtgg cgaaagattc acgcatcatc gactcgatga tccacgccgc
    23101 acataacggt aagaaagtca ccgtggtggt tgagttacag gcgcgtttcg acgaagaagc
    23161 taacattcac tgggcgaagc gcctgaccga agcaggcgtg cacgttatct tctctgcgcc
    23221 ggggctgaaa attcacgcca aactgttcct gatttcacga aaagaaaacg gtgaagtggt
    23281 gcgttacgca cacatcggga ccgggaactt taacgaaaaa accgcgcgtc tttatactga
    23341 ctattcattg ctgaccgccg atgcgcgtat caccaacgaa gtacggcggg tatttaactt
    23401 tattgaaaac ccataccgcc cggtgacatt tgattattta atggtgtcac cgcaaaactc
    23461 tcgccgtctg ttatatgaaa tggtagaccg cgaaatcgcc aacgcgcagc aagggctgcc
    23521 cagcggtatc accctgaagc taaataacct tgtcgataaa ggcctggttg atcgtctgta
    23581 tgcggcctcc agctccggcg taccggttaa tctgctggtt cgcggaatgt gttcgctgat
    23641 ccccaatctg gaaggcatta gcgacaacat tcgtgccatc agtattgttg accgttacct
    23701 tgaacatgac cgggtttata tttttgaaaa tggcggcgat aaaaaggtct acctttcttc
    23761 cgccgactgg atgacgcgca atattgatta tcgtattgaa gtggcaacgc cgctgctcga
    23821 tccgcgcctg aagcagcggg tgctggacat catcgacata ttgttcagcg atacggtcaa
    23881 agctcgttat atcgataaag aactcagtaa tcgctacgtt ccccgcggca atcgccgcaa
    23941 agtacgggcg cagttggcga tttatgacta catcaaatca ctcgaacaac ctgaataacc
    24001 ctatgccaat acacgataaa tcccctcgtc cgcaggagtt tgctgcggtc gatcttggtt
    24061 caaacagttt tcacatggtc atagcccgtg tggtagatgg tgccatgcag attattggcc
    24121 gcctgaaaca gcgggtgcat ctggcggacg gcctggggcc agataatatg ttgagtgaag
    24181 aggcaatgac gcgcggtttg aactgtctgt cgctttttgc cgaacggcta caagggtttt
    24241 ctcctgccag cgtctgtata gttggtaccc atacgctgcg tcaggcgctg aacgccactg
    24301 actttctgaa acgcgcggaa aaggtcattc cctacccgat tgaaattatt tccggtaatg
    24361 aagaagcccg tctgattttt atgggagtgg aacataccca accggaaaaa ggtcgcaaac
    24421 tggttattga tattggcggc ggatctacgg aactggtgat tggtgaaaat ttcgaaccta
    24481 ttctcgttga aagccgccgg atgggttgtg tcagctttgc ccagctttat ttccctggcg
    24541 gggtcatcaa taaagagaat ttccagcgcg ctcgcatggc agcagcacaa aaactggaaa
    24601 ctttaacctg gcaattccgt attcagggct ggaacgtggc aatgggcgct tccggtacca
    24661 taaaagccgc ccatgaagta ttaatggaaa tgggcgagaa agacgggata attaccccgg
    24721 aacgtctgga aaaactggta aaagaagttt tacgtcaccg taatttcgca tcgctgagtt
    24781 taccgggtct ttccgaagag cggaaaacag tcttcgttcc tggactggcg attttatgcg
    24841 gtgtgtttga tgctttagcc atccgtgaac tgcgcctttc tgacggggct ttacgtgaag
    24901 gcgtactgta tgaaatggaa ggacgtttcc gtcatcagga tgtgcgtagt cgtaccgcca
    24961 gcagcctcgc caaccagtat cacatcgaca gcgaacaggc ccgacgagtg ctggatacca
    25021 ctatgcaaat gtacgaacag tggcgggaac agcaaccgaa gctggcgcat ccgcaactgg
    25081 aggcgctact gcgatgggcc gccatgctgc atgaggtcgg gttgaatatc aaccacagcg
    25141 gtttgcatcg ccactccgct tatattctgc aaaacagtga cttgccgggt tttaatcagg
    25201 aacagcagct gatgatggcg acactggtgc gctatcaccg taaagcgatt aagctcgacg
    25261 atctgccgcg ctttaccttg tttaagaaga aacagttcct gccactgata cagctattgc
    25321 gccttggcgt attactaaac aatcaacgtc aggcaaccac cacaccgcca acattgacac
    25381 tgattactga tgacagtcac tggacactgc gtttcccgca tgactggttt agtcagaatg
    25441 cgctggtact gcttgatctg gaaaaggagc aagaatactg ggaaggcgtg gctggctggc
    25501 ggttgaaaat tgaagaagaa agtacacctg aaatcgccgc ttaatgcttt gcgggccgac
    25561 gagaaatgtc ggcccgcatt attcaggcac tttcgcgaat gggttcgatt tcattcagcg
    25621 tatcaattaa cggttgcggc ttaccaataa gataaccctg catataatcg atccccaaag
    25681 agagcaccgc ctcgcggatc tcttcgtttt caacgtactc tgccactacc cgcattttct
    25741 tcattcgcgc caggtggcaa atcgatgcca ctatctgata atccagacta tttgacacaa
    25801 tattgcggat aaaactgccg tcaattttaa gcagatcggc attcacattt ttaagccgcg
    25861 catagctggc gtagccggtg ccgaaatcat caatcgcaat ctggcagcct aattcctgaa
    25921 gatgctgcaa ggtgatttgc gcctgcttaa cattggtcag agcattactt tcggtgactt
    25981 caaaaataag ttgccacgct tcaatctgat atttatccag caactgactg acttcaacag
    26041 gaaaacgagc ctgacatacc gaggttggag acagattaat agcaaaacgg tgagcgggca
    26101 tcttcgctct gttttcagcc ataaattgca gcgtatgctc aatgacccac atgtcgatac
    26161 tcgacgataa accaaattcg tgcgcgaccg gcaagaagct atcggggccg atcagttcat
    26221 cattctcacc tttcatgcgc agaagaattt catggtaaac atcaccacgc ataccggtaa
    26281 tcggctgggc catcaggaaa aaatggttgt gttccagcgc ctgctgtagt cgattcatca
    26341 tcgcgacttt atctttcaat tcgcgttgca aatacattgc cccgcgacgc tgcatatttt
    26401 ccggggcgtt ggtcacgatg gaaagttcgg cgaccgtatt tagctctccc agcagcaggt
    26461 agatatgatt cactggcgag cgcacatagc agtaactgac gccaatctgc ggttgcatcg
    26521 gcatgccatc ccaaaagaaa cgaaattgct tgagatggct atccagtgcg gtaatgcgct
    26581 cctggtgcga ttctgtattc agccgcagcg cgagatcgtt acccgaaagc tgataaacat
    26641 cttcacccgg ttccagcaag ggtgacagcc agtgagaaag tttttgcttg tattgaatcc
    26701 gcagcatgat gccatagttc ttaaccagca tttccatgcc agggatgcgt aaataacaaa
    26761 gcgcagacca gggggcatca cgcaacgcgc gattcagggc gcgaacattt ggcagatgaa
    26821 ccaccgggtc cacatacgca agccgctgaa tgcgtctgac taccgctcgc tgacgagttg
    26881 ccagtacagc catataattg acaataaaag agaataccag ataactggag gaggttatgg
    26941 tcagctgcgt ggtatagcca ggataaatgg gaatgtaatt ttgatagctg tggatgctga
    27001 tcatcaacac gaccgcccag agcagcgaaa tcagcttata accatagcgc atcgctcccc
    27061 acatcatcag gggcagcaat aatgacaagg tataattggt gctaaaaatt gtgctttttt
    27121 catttaacgg catgcataac agcaacaata aagcacctaa tgccagtagc cagagcgcga
    27181 actctttttt ggtgactttg gcatcaacct gctgttttaa ttgcgaataa tagctacgta
    27241 aataaaatgg atttcgcact acccgaatga tgaagtagca cagcgggaca ccgatcagat
    27301 tacccaccag taaggcctga taattgatta aagtcccgag gttaaaaggc atgacaccga
    27361 ccagattttc tctgctcgcc agcaatccta caaatgcagc aaactggaaa agtatcagaa
    27421 acagcgttgc aggaaacact atctgccaga atatacgctg ggaaattaaa cgggtatcac
    27481 catgtgaaac gttgttacgc cggggagtaa agaccctgta accgccccaa cagagaatga
    27541 taatgataat aaaattagcc gttaatgaga gcgtttcgta aaaacccagc tctgcatatt
    27601 tgcggacaaa aatccctaag gtgatccctg gcaatgccgc ccagctgaaa aacatcatca
    27661 tgctgatcat cagtgccaaa ggcagataaa agagaaaaac ctcaccggaa gaaatatgcg
    27721 cgaaagtatt aatgtgggcg aaaatgggca agattaaaga aggcaggaac agcggaagcc
    27781 cccaccattt atcacgtatt tttatataag ttgcattcag tttcatagat gctcagcaga
    27841 atcccccaca tcctgaagga ggtgtattca gacaggcatc ccacctgact tcgaatgatg
    27901 attattcatc actatagaga gcattgattc taagtgtcat atgaaagttc caattgat
//
LOCUS       DAPGWB010000052        27926 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.052, whole genome shotgun sequence.
ACCESSION   DAPGWB010000052 DAPGWB010000000
VERSION     DAPGWB010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 27926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27926
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.052"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..1406
                     /gene="tnaA"
                     /locus_tag="RHX79_002126"
     CDS             <1..1406
                     /gene="tnaA"
                     /locus_tag="RHX79_002126"
                     /EC_number="4.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709490.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tryptophanase"
                     /protein_id="HDV2197296.1"
                     /translation="KHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFI
                     DLLTDSGTGAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAE
                     QIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVR
                     YDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDI
                     PVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLL
                     CMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQV
                     QYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEI
                     GSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAANIKGLTF
                     TYEPKVLRHFTAKLKEV"
     gene            1497..2744
                     /gene="tnaB"
                     /locus_tag="RHX79_002127"
     CDS             1497..2744
                     /gene="tnaB"
                     /locus_tag="RHX79_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity tryptophan permease TnaB"
                     /protein_id="HDV2197297.1"
                     /translation="MTDQAEKKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAF
                     ILIIAWFSMLHSGLLLLEANLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTY
                     AYISANGAIISETISMNLGYHANPRIVGICTAIFVASVLWISSLAASRITSLFLGLKI
                     ISFVIVFGSFFFQVDYSILRDATSTTAGTSYFPYIFMALPVCLASFGFHGNIPSLIIC
                     YGKRKDKLIKSVVFGSLLALVIYLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLG
                     TKQHGIIEFCLLVFSNLAVASSFFGVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPP
                     ALLYLIFPNGFIYGIGGAGLCATIWAVIIPAVLAIKARKKFPNQMFTVWGGNLIPAIV
                     ILFGITVILCWFGNVFNVLPKFG"
     gene            2876..4051
                     /gene="mdtL"
                     /locus_tag="RHX79_002128"
     CDS             2876..4051
                     /gene="mdtL"
                     /locus_tag="RHX79_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtL"
                     /protein_id="HDV2197298.1"
                     /translation="MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAF
                     SVYLAGMAAAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQG
                     LGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLF
                     WTMAMMGIAVLMLSLFILKETRPASPAASDKPRENSESLLNRFFLSRVVITTLSVSVI
                     LTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQV
                     LFLAAGITLAVSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIA
                     QVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEIHHHA"
     gene            4026..4985
                     /gene="yidZ"
                     /locus_tag="RHX79_002129"
     CDS             4026..4985
                     /gene="yidZ"
                     /locus_tag="RHX79_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator YidZ"
                     /protein_id="HDV2197299.1"
                     /translation="MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLA
                     KLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA
                     AESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSR
                     ELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWAL
                     DNVLQELRRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL
                     PFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA"
     gene            5142..5891
                     /locus_tag="RHX79_002130"
     CDS             5142..5891
                     /locus_tag="RHX79_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HDV2197300.1"
                     /translation="MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRG
                     LLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLD
                     MELQRATRGFHSPHAPDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLN
                     DDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPTIEKLSVWEFDGKHGWK
                     SLPDIHSRANNPTSRMMRFAQLSTVKAFSPN"
     gene            5913..6479
                     /gene="yieF"
                     /locus_tag="RHX79_002131"
                     /gene_synonym="chrR"
     CDS             5913..6479
                     /gene="yieF"
                     /locus_tag="RHX79_002131"
                     /gene_synonym="chrR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I chromate reductase YieF"
                     /protein_id="HDV2197301.1"
                     /translation="MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIA
                     DIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLP
                     DQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQT
                     GEVIDQGTLDHLTGQLTAFGEFIQRVKI"
     gene            complement(6533..7870)
                     /gene="adeP"
                     /locus_tag="RHX79_002132"
     CDS             complement(6533..7870)
                     /gene="adeP"
                     /locus_tag="RHX79_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine permease AdeP"
                     /protein_id="HDV2197302.1"
                     /translation="MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVY
                     IVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVV
                     VQAMGLPWQVGMGAIFWGAIGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG
                     LKNAGVIVANPETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLG
                     WMLGDVHYNGIVSAPPSVMTVVGHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVT
                     DKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESSSGVLVGGRTGLTAV
                     VVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAV
                     MMPFSFSITEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH"
     gene            8037..8702
                     /gene="yieH"
                     /locus_tag="RHX79_002133"
     CDS             8037..8702
                     /gene="yieH"
                     /locus_tag="RHX79_002133"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconate phosphatase"
                     /protein_id="HDV2197303.1"
                     /translation="MSQIEAVFFDCDGTLVDSEVICSRAYVTMFQEFGITLDPEEVFK
                     RFKGVKLYEIIDIVSLEHGVTLAKTEAEHVYRAEVARLFDSELEAIEGAGALLSAITA
                     PMCVVSNGPNNKMQHSMGKLNMLHYFPDKLFSGYDIQRWKPDPALMFHAAKAMNVNVE
                     NCILVDDSVAGAQSGIDAGMEVFYFCADPHNKPIVHPKVTTFTHLSQLPELWKARGWD
                     ITA"
     gene            8769..9242
                     /locus_tag="RHX79_002134"
     CDS             8769..9242
                     /locus_tag="RHX79_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein CbrB"
                     /protein_id="HDV2197304.1"
                     /translation="MSVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLVLLVIIQ
                     VLPLFLLLSITTGAIPALLTGVMVACLPEKIGSQKNYRCLAGGIGGVVITEIYCAVIV
                     HIKGMASSELFENILSGDSLVVRIIPALLAGVVMSRIITRLPGLDISCPETDSLS"
     gene            9291..9878
                     /locus_tag="RHX79_002135"
     CDS             9291..9878
                     /locus_tag="RHX79_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbrC family protein"
                     /protein_id="HDV2197305.1"
                     /translation="MTQNIRPLPQFKYHPKPLETGAFEQDKTVECDCCEQQTSVYYSG
                     PFYCVDEVEHLCPWCIADGSAAEKFAGSFQDDASIEGVEFEYDEEDEFAGIKNTYPDE
                     MLKELVERTPGYHGWQQEFWLAHCGDFCAFIGYVGWNDIKDRLDEFANLEEDCENFGI
                     RNSDLAKCLQKGGDCQGYLFRCLHCGKLRLWGDFS"
     gene            complement(9940..10662)
                     /locus_tag="RHX79_002136"
     CDS             complement(9940..10662)
                     /locus_tag="RHX79_002136"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HDV2197306.1"
                     /translation="MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMY
                     EYLTTLVKGKPWYDNCYFYNFDEIPFRGKEGEGVTITNLRNLFFTPAGIKEENIQKLT
                     IDNYREHDQKLAREGGLDLVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVA
                     HGELGGDFSLVPDSYVTMGPKSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASV
                     LQLHPSLMVIADKAAAAELALG"
     gene            complement(10677..11846)
                     /locus_tag="RHX79_002137"
     CDS             complement(10677..11846)
                     /locus_tag="RHX79_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709476.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDV2197307.1"
                     /translation="MNIKIAALTLAIASGISAQWVIAADMPASPAPTIPVKQYVTQVN
                     ADNSVTFRYFAPGAKNVSVVVGGPVPDNIHPMTKDEAGVWSWRTPILKGNLYEYFFNV
                     DGVRSIDTGTAMTKPQRQVNSSMILVPGSYLDTRSVAHGDLIAITYHSNALQSERQMY
                     VWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPD
                     TETDAKGIIPEDFVPQERRKVFYPLNAKAADRELMNDIIPLISKRFNVRKDADGRALA
                     GLSQGGYQALVSGMNHLESFGWLATFSGVTTTTVPDEGVAARLNDPAAINQQLRNFTV
                     VVGDKDVVTGKDIAGLKTELEQKKIKFDYQEYPGLNHEMDVWRPAYAAFVQKLFK"
     gene            complement(11873..13489)
                     /gene="bglH"
                     /locus_tag="RHX79_002138"
     CDS             complement(11873..13489)
                     /gene="bglH"
                     /locus_tag="RHX79_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-specific porin BglH"
                     /protein_id="HDV2197308.1"
                     /translation="MFRRNLITSAILLMAPLAFSAQSLAESLTVEQRLELLEKALRET
                     QSELKKYKDEEKKKYTPATVNRSVSTNDQGYAANPFPTSSAAKPDAVLVKNEEKNASE
                     TGSIYSSMTLKDFSKFVKDEIGFSYNGYYRSGWGTASYGSPKSWAIGSLGRFGNEYSG
                     WFDLQLKQRVYNENGKRVDAVVMMDGNVGQQYSTGWFGDNAGGENFMQFSDMYVTTKG
                     FLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAAAGVGLENWKVGPGKIDIALVRED
                     VDDYDRSLQNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESASEKDNQDNNGY
                     YDWKDTWMFGTSLTQKFDKGGFNEFSFLVANNSIASNFGRYAGASPFTTFNGRYYGDH
                     TGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNDIYSYETGAHSDFESIRAVVRPAYIW
                     DQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTSMLTSRPEIRFYATYI
                     KALENELDGFTFEDNKDDQFAVGAQAEIWW"
     gene            complement(13575..14969)
                     /gene="bglB"
                     /locus_tag="RHX79_002139"
     CDS             complement(13575..14969)
                     /gene="bglB"
                     /locus_tag="RHX79_002139"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase BglB"
                     /protein_id="HDV2197309.1"
                     /translation="MKAFPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKM
                     EPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRISIAWARIFPQGDEVEPNEAG
                     LAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRY
                     QHKVALWLTFNEINMSLHEPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLP
                     EAKIGNMLLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNI
                     TIEMTESDAEDLKHTVDFISFSYYMTGCVSHDESINKNAQGNILNMIPNPHLKSSEWG
                     WQIDPVGLRVLLNTLWDRYQKPLFIVENGLGVKDSVEADGSIQDDYRIAYLNDHLVQV
                     NEAIADGVDIMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGW
                     YAEVIKTRGLSLKK"
     gene            complement(14988..16865)
                     /gene="bglF"
                     /locus_tag="RHX79_002140"
     CDS             complement(14988..16865)
                     /gene="bglF"
                     /locus_tag="RHX79_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS beta-glucoside transporter subunit IIABC"
                     /protein_id="HDV2197310.1"
                     /translation="MTELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLK
                     NTPGIIMVVESGGQFQVVIGNHMADVFLAVNSVAGLGEKAQQAPENDEKGNLLNRFVY
                     VISGIFTPLIGLMAATGILKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILG
                     YTAGKRFGGNPFTAMVIGGALVHPLILTAFENGQKADELGLDFLGIPVTLLNYSSSVI
                     PIIFSAWLCSILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISELIAA
                     GYLWLYQAVPAFAGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIM
                     AQVGAALGVFLCERDAQKKVVAGSAALTGLFGITEPAVYGVNLPRKYPFVIACISGAL
                     GATIIGYAQTKVYSFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLH
                     FITAKRQPAQGAPQEKTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIA
                     ILPSVGEVRSPVAGRIASLFATLHAIGIESDDGVELLIHVGIDTVKLDGKFFSAHVNV
                     GDKVNTGDRLISFDIPAIREAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSII
                     R"
     gene            complement(16999..17835)
                     /gene="bglG"
                     /locus_tag="RHX79_002141"
     CDS             complement(16999..17835)
                     /gene="bglG"
                     /locus_tag="RHX79_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator BglG"
                     /protein_id="HDV2197311.1"
                     /translation="MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSS
                     GIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHC
                     QFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMH
                     LVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILE
                     HASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRK
                     EH"
     gene            complement(18121..18846)
                     /gene="phoU"
                     /locus_tag="RHX79_002142"
     CDS             complement(18121..18846)
                     /gene="phoU"
                     /locus_tag="RHX79_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HDV2197312.1"
                     /translation="MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMH
                     NQDSDLAKRVIEGDKNVNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERI
                     GDVADKICRTALEKFSQQHQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYRE
                     DKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVK
                     GQDFRHVGGDELDKLLAGKDSDK"
     gene            complement(18861..19634)
                     /gene="pstB"
                     /locus_tag="RHX79_002143"
     CDS             complement(18861..19634)
                     /gene="pstB"
                     /locus_tag="RHX79_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HDV2197313.1"
                     /translation="MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGP
                     SGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTP
                     FPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQ
                     RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARC
                     SDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG"
     gene            complement(19725..20615)
                     /gene="pstA"
                     /locus_tag="RHX79_002144"
     CDS             complement(19725..20615)
                     /gene="pstA"
                     /locus_tag="RHX79_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDV2197314.1"
                     /translation="MAMVEMQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFW
                     LIWILMSTITRGIDGMSLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGI
                     MAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIAL
                     ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAI
                     ARIAGETAPLLFTALSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIIT
                     LCVLLLNILARVVFAKNKHG"
     gene            complement(20615..21574)
                     /gene="pstC"
                     /locus_tag="RHX79_002145"
     CDS             complement(20615..21574)
                     /gene="pstC"
                     /locus_tag="RHX79_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008806729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstC"
                     /protein_id="HDV2197315.1"
                     /translation="MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIIS
                     SWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTE
                     LAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGAL
                     FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRI
                     VLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFA
                     EAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR"
     gene            complement(21661..22701)
                     /gene="pstS"
                     /locus_tag="RHX79_002146"
     CDS             complement(21661..22701)
                     /gene="pstS"
                     /locus_tag="RHX79_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDV2197316.1"
                     /translation="MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKW
                     ADTYQKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIG
                     GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRR
                     ADGSGTSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGY
                     VEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWP
                     ITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWK
                     TNIKDSSGKPLY"
     gene            complement(22949..24022)
                     /locus_tag="RHX79_002147"
     CDS             complement(22949..24022)
                     /locus_tag="RHX79_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001685709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2197317.1"
                     /translation="MNKYIKQWCFAVFMLSLSSVALAAPKGICTPDNGVFHSTLDFSG
                     YLITANENKVGTTFNTTVTNGSSYPGRCHCDTGNVGEFPYIYYTSKINQALTYAGVHS
                     NINYYDLNPNLDVGIAIDILGVGYVNAPFEYHANNPSGNTKYNCNRIEPLSISSGAKA
                     IVYFYIKKTFAGKLIIPETKIVTLYGTISRDTPVDYSQPMADVYIRGDITAPQSCEIN
                     NLQPVYFDFKEIPAADFSSVVGSAVTTHKITKTVTIECENLGILNTDDISTSFYATEP
                     NTDNSMVVTSNSNVGIKIYDKNNKEIKVNGGELPTDMGKSTVYGEKSGSVTFSAAPAS
                     LTGARPAPGQFTATATITVEIVR"
     gene            complement(24033..26555)
                     /locus_tag="RHX79_002148"
     CDS             complement(24033..26555)
                     /locus_tag="RHX79_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HDV2197318.1"
                     /translation="MMTTRIVVGLTAGTCLIFSQNLMAEVSVFNPALLEIDHQSGVDI
                     RQFNRANLMPPGVYSVDIFINGKMFERQDVTFVQDNPDADLHACFIAIKKTLSSFGIK
                     VDALKSFNDVDETVCLDPAPRIEGSSWQFDSDKLQLNISIPQIYMDAMAYDYISPTRW
                     DEGINALTINYDFSGSHTLRSDYGSQETDTSYLNLRNGLNIGPWRLRNYSTLNTSDGR
                     AEYNSISTWIQRDIAALRSQIMIGDTWTASDIFDSTQIRGARLYTDNDMLPASQNGFA
                     PVVRGIAKSNATVIIRQNGYVIYQSAVPQGAFEITDLNTASTGGDLDVTIKEEDGSEQ
                     RFTQPYASLAILKREGQTDVDVSVGELRDEDGFTPDVLQAQILHGFSHGITLYGGMQA
                     AENYGSAALGVGKDLGALGAISFDVTHARANFSHDDTETGQSYRFLYSKRFDDTDTSL
                     RLVGYRYSTEGYYTLNEWASRRNSPEYFWETGNRRSRVEGTLTQSLGRDYGNLYLTLS
                     RQQYWHTDDVERLMQFGYSSSWKRLSWNVSWSYSNTARQGTGNNHASDNTSEQIYMLS
                     LSVPLSGWWGNSYATYSVSQNDNSGSSHQLGLSGTALERNNLSWNLMQSYNSHDDEVG
                     GNMSLTYDGSYGTVNGSYNYSQNSQRLNYGIRGGILAHSEGVTLSQELGETIALVKAP
                     GAAGLEIDNMRGAATDWRGYTVKTQLNPYDENRVAISDNYFSKSNIELDNTVVTMVPT
                     RGAVVKAEFVTHVGYRVLFRVLNANGKPVPFGAIAAIQDASLADSGIVGDRGELYLSG
                     LPEKGQVTLSWGENASTKCIFNYSLSTPESESGLIEQGVTCH"
     gene            complement(26580..27311)
                     /locus_tag="RHX79_002149"
     CDS             complement(26580..27311)
                     /locus_tag="RHX79_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001572122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HDV2197319.1"
                     /translation="MSRKSCLIRLFKTTVSCKLFTAIILSVFLGQPALTYAGVVIGGT
                     RVVYLSNNADKSISVFSKEEKIPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLEPSQEK
                     ILRIIHTKGVSLPDDRESVFWLNIKNIPPSASNKATNSLEIAVKTRIKLFWRPANIRL
                     IPEDAAPKVKWRREGRNLIAENPNPIHISVMDVIVDGHDVPLNMIRPFETLTLPLPAN
                     SAGGQMTWRFINDYGAVSDPIKMTL"
     gene            complement(27359..27919)
                     /locus_tag="RHX79_002150"
     CDS             complement(27359..27919)
                     /locus_tag="RHX79_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015570147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2197320.1"
                     /translation="MIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQ
                     IVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDGDLKVGT
                     PLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEMKFIA
                     RYVATNATVTAGTANADSQFTVEYKK"
BASE COUNT         7102 a         7024 c         6540 g         7260 t
ORIGIN      
        1 ttaaacatct ccctgaaccg ttccgcattc gtgttattga gccagtaaaa cgtactactc
       61 gcgcttatcg tgaagaagca attattaaat ccggtatgaa cccgttcctg ctggatagcg
      121 aagatgtgtt tatcgattta ctgaccgaca gcggcaccgg ggcggtaacc caaagtatgc
      181 aggcagcgat gatgcgcggc gacgaagcct acagcggcag ccgcagctac tatgcgttag
      241 ccgagtcagt gaaaaatatc tttggttatc aatacaccat tccgactcac cagggccgtg
      301 gcgcagagca aatttatatt ccggtactga ttaaaaaacg cgagcaggaa aaaggcctgg
      361 atcgcagcaa aatggtggca ttctctaact atttctttga taccacgcag ggccatagcc
      421 agattaacgg ctgtaccgtg cgtaacgtct atatcaaaga agccttcgat actggcgtgc
      481 gttacgactt taaaggtaac tttgaccttg agggattaga acgcggtatt gaagaagttg
      541 gcccgaataa cgtgccgtat atcgttgcaa ccatcaccag taactctgca ggtggtcagc
      601 cggtttcact ggcaaactta aaagcgatgt acagcatcgc gaagaaatac gatattccgg
      661 tggtaatgga ctccgcacgc tttgctgaaa acgcctattt catcaagcag cgtgaagcag
      721 aatacaaaga ctggaccatc gagcagatca cccgcgaaac ctacaaatat gccgatatgc
      781 tggcgatgtc cgccaagaaa gatgcgatgg taccgatggg cggcttgctg tgcatgaaag
      841 acgacagctt ctttgatgtg tacaccgagt gcagaaccct ttgcgtggtg caggaagggt
      901 tcccgacata tggcggcctg gaaggcggcg cgatggagcg tctggcggta ggtctgtatg
      961 acggcatgaa tctcgactgg ctggcttatc gtatcgcgca ggtacagtat ctggtcgatg
     1021 gtctggaaga gattggcgtt gtctgccagc aggcgggcgg tcacgcggca ttcgttgatg
     1081 ccggtaaact gctgccgcat atcccggcag accagttccc ggcacaggcg ctggcgtgcg
     1141 agctgtataa agtcgccggt atccgtgcgg tagaaattgg ctctttcctg ttaggccgcg
     1201 atccgaaaac cggtaaacaa ctgccatgcc cggctgaact gctgcgttta accattccgc
     1261 gcgcaacata tactcaaaca catatggact tcattattga agcctttaaa catgtgaaag
     1321 agaacgcggc gaatattaaa ggattaacct ttacctacga accaaaagta ttgcgtcact
     1381 tcaccgcaaa actgaaagaa gtttaattaa tactacagag tggctataag gatgttagcc
     1441 actctcttac cctacatcct caataacaaa aatagccttc ctctaaaggt ggcatcatga
     1501 ctgatcaagc tgaaaaaaag cactctgcat tttggggtgt tatggttata gcaggtacag
     1561 taattggtgg aggtatgttt gctttacctg ttgatcttgc cggtgcctgg tttttctggg
     1621 gtgcctttat ccttatcatt gcctggtttt caatgcttca ttccgggtta ttgttattag
     1681 aagcaaattt aaattatcct gtcggctcca gttttaacac catcaccaaa gatttaatcg
     1741 gtaacacctg gaacattatc agcggtatta ccgttgcctt cgttctctat atcctcactt
     1801 atgcctatat ctctgctaat ggtgcgatca ttagtgaaac gatatcaatg aatttgggct
     1861 atcacgctaa tccacgtatt gtcgggatct gcacagccat tttcgttgcc agcgtattgt
     1921 ggataagttc gttagccgcc agtcgcatta cctcattgtt cctcgggctg aagattatct
     1981 cctttgtgat cgtgtttggt tctttcttct tccaggtcga ttactccatc ctgcgcgatg
     2041 ccaccagcac cactgcggga acgtcttact tcccgtatat ctttatggct ttgccggtgt
     2101 gtctggcgtc atttggtttc cacggcaata ttcccagcct gattatttgc tatggaaaac
     2161 gcaaagataa gttaatcaaa agcgtggtat ttggttcgct gctggcgctg gtgatttatc
     2221 tcttctggct ctattgcacg atggggaata ttccgcgcga aagctttaag gcgataatct
     2281 cctcaggcgg caacgttgat tcgctggtga aatcgttcct cggcaccaaa cagcacggca
     2341 ttatcgagtt ttgcctgctg gtgttctcta acttagctgt tgccagttcg ttctttggtg
     2401 tcacgctggg gttgttcgat tatctggcgg acctgtttaa gattgataac tcccacggcg
     2461 ggcgtttcaa aaccgtgctg ttaaccttcc tgccacctgc gttgttgtat ctgatcttcc
     2521 cgaacggctt tatttacggg atcggcggtg ccgggctgtg cgccaccatc tgggcggtca
     2581 ttattcccgc agtgcttgca atcaaagctc gcaagaagtt tcccaatcag atgttcacgg
     2641 tctggggcgg caatcttatt ccggcgattg tcattctctt tggtataacc gtgattttgt
     2701 gctggttcgg caacgtcttt aacgtgttac ctaaatttgg ctaaatcctt caagaagcca
     2761 gccattcgct ggcttcttgc ctctcaggaa atcacttatg tccaaatggc aactcgcctg
     2821 attctccttc accacgtatg ctttgcgtca ccttactatc aggacgcttt agcccatgtc
     2881 ccgcttttta atttgtagtt ttgccctggt tttactttat cccgccggga ttgatatgta
     2941 cctcgttggt ttaccgcgca tcgccgccga tctcaatgcc agcgaagcgc agttgcatat
     3001 tgcgttctcc gtttatctgg cgggcatggc agctgcgatg ttatttgccg gtaaagtggc
     3061 cgatcgttca gggagaaagc cggtcgccat ccccggcgcg gcgctattta ttatcgcttc
     3121 ggtgttctgt tcactggctg aaaccagcac gttatttctt gcagggcgct ttctacaggg
     3181 gttgggcgca ggctgttgtt acgtggtggc gttcgccatt ttgcgcgaca cgctggatga
     3241 tcgacgtcgg gctaaagtgc tgtcgttact caacggtatt acctgcatca ttccggtgtt
     3301 agcgccggtg ctcggacacc tgattatgct taaattccct tggcagagtc tgttctggac
     3361 gatggcaatg atgggcatcg cggtactgat gttatctttg tttattttaa aagaaacgcg
     3421 cccagcgtcc cccgctgctt cggacaaacc acgagaaaat agcgagtcgc tgcttaatcg
     3481 gtttttcctc agccgtgttg ttatcaccac cctcagcgtt tcggtgatcc tcactttcgt
     3541 caatacatcg ccggtattgc tgatggaaat catgggtttt gagcgcggag aatacgccac
     3601 cattatggcg ttgaccgctg gcgtcagcat gaccgtttca ttctccacgc catttgcgct
     3661 gggaattttt aagccacgta cgttgatgat cacctcgcag gtgttattcc ttgcggcggg
     3721 gatcaccctt gccgtttcac cttcccatgc ggtttctctg tttggtatca cgctgatttg
     3781 cgccggtttc tcggtaggtt ttggcgtagc gatgagtcag gcgttaggac cattttcatt
     3841 acgcgcgggc gtagccagct cgaccttagg tattgcgcag gtttgcggtt cgtcactgtg
     3901 gatttggctg gcagcggtgg ttggtatcgg cgcatggaat atgctgatcg ggattctgat
     3961 tgcctgtagc atagtgagcc tgttactgat tatgttcgtc gcgcctggac gccccgttgc
     4021 cgctcatgaa gaaatccatc accacgcttg atctcaatct gctgctctgt ctgcaactgc
     4081 tgatgcagga gcgcagcgtg accaaagcgg cgaagcggat gaacgtgacc ccttcagcgg
     4141 tgagtaagtc gctggcaaag ttaagagcgt ggtttgacga cccgctcttt gtgaactcac
     4201 cgctggggct gtcgcccaca ccgctaatgg tcagcatgga gcaaaatctg gcggaatgga
     4261 tgcaaatgag caatctgctg ctggataaac cgcaccacca gacaccgcgc ggcctgaagt
     4321 ttgagttggc ggcggaatcg ccgctgatga tgatcatgct taatgcgctg tcgaaacgga
     4381 tctaccaacg ttacccgcag gcgaccatca aactacgtaa ctgggattac gattccttag
     4441 atgccattac tcgtggtgaa gtggatattg gtttttccgg tcgcgaaagc catcctcgct
     4501 cgcgggagct gttaagctcg ctaccgttag ccattgatta tgaagtgctg tttagtgatg
     4561 taccctgcgt ctggttacgc aaagatcatc cggcactgca tgaaacgtgg aatctggaca
     4621 cctttttacg ttatccgcat atcagcattt gctgggaaca gagcgacacc tgggcgctgg
     4681 acaatgtgtt acaggagctg aggcgcgaac gcacgattgc tatgagcctg ccggaatttg
     4741 agcagtcact gtttatggca gcgcaacccg acaatctgct actggcgacc gcgccgcgct
     4801 actgtcagta ctacaatcaa ctccatcaac tgccgttggt tgctcttcct ctcccgtttg
     4861 acgaaagcca gcaaaaaaag ctggaagttc cttttaccct gctgtggcat aaacggaaca
     4921 gccataatcc gaagatcgtc tggttacggg aaaccattaa aaacctttac gcgtcgatgg
     4981 cataaccgaa tcgtatgaaa cgcgacccaa tttcacaata aaatgtaaaa aagttgtaat
     5041 aagcttgtct gaatcgaact tttagccgct ttagtctgtc catcattcca gtaaatgatt
     5101 actcttgtat tcataatgga ccattaagca tggagcgaaa aatggcgact cactttgccc
     5161 gagggatttt aacggaagga catctgattt ctgttcgtct cccctcccag tgtcatcaag
     5221 aagcccgaaa cattccccct catcgtcaaa gccgttttct ggcgtccaga ggtttactcg
     5281 cagaactgat gttcatgctg tatggcattg gcgaattgcc ggaaatcgtc accctgccga
     5341 aaggtaaacc ggttttcagt gataaaaatt tgccttcgtt ttctatttcc tatgccggga
     5401 atatggttgg cgtggcgtta acaaccgaag gtgaatgtgg tctcgatatg gaactacagc
     5461 gtgcgacgcg cgggtttcat agcccacacg cgcccgataa ccacaccttt tccagcaatg
     5521 aatcgctatg gatcagtaaa caaaacgatc ctaacgaagc gcgggcgcag ctcatcacgc
     5581 tgcgccgaag cgtgctaaaa ctaaccggtg atgttttgaa tgacgatccg cgcgatctgc
     5641 agctgctgcc cattgccgga cgcctgaaat gtgctcatgt aaatcatgta gaagcgttat
     5701 gcgacgcgga ggacgtgctg gtgtggtccg tggcggtcac gcccacgatt gaaaagctca
     5761 gtgtctggga gttcgatggc aaacacggct ggaaaagcct gccggatatt cacagccgcg
     5821 ccaacaatcc taccagccgg atgatgcgtt ttgcccagct ctctaccgtg aaggcttttt
     5881 cgccaaattg atagacaacc acaggagtca tcatgtctga aaaattgcag gtggttacgt
     5941 tactggggag cctgcgcaaa ggctcattta atggcatggt tgcacgtacc ctgccgaaaa
     6001 ttgctccggc gagcatggaa gtcaatgcgt taccttccat tgccgacatt cccttgtatg
     6061 acgctgacgt acagcaggaa gaaggttttc cagcaacggt tgaagctctg gcggaacaga
     6121 tccgtcaggc tgacggtgtg gtgatcgtca cgccggaata taactactcg gtaccgggtg
     6181 ggctgaaaaa tgccatcgac tggctttccc gcctgccgga tcaaccgctg gccggtaaac
     6241 cggtgttgat tcagaccagc tcaatgggcg tgattggcgg cgcgcgctgt cagtatcacc
     6301 tgcgccagat tctggttttc ctcgatgcaa tggtgatgaa caagccggaa tttatgggcg
     6361 gcgtgattca gaacaaagtt gatccgcaaa ccggagaagt gattgatcag ggtacgctgg
     6421 accacctgac cgggcaattg accgcatttg gtgagtttat tcagcgagtt aagatctaaa
     6481 taaaaaaccc gccagcaatc atgcatggcg ggtttttaac gcgctatcga ttttagtgag
     6541 cgtcgataaa gacaatcttc aggataaaca gcagcgcaac gatgattacg cacgggctta
     6601 gatcacgcag acgtccggta ccgattttca tcacgcagta ggagataaag cccagcgcga
     6661 taccttcggt aatcgagaag ctgaacggca tcatcacggc ggtaataaac gccggaacag
     6721 attcagtaag atcctgccag ttcacgcgtg ccagactgga agtcatcagc acgccaacgt
     6781 aaatcagcgc accagctgca gcgtagcctg gcaccatccc cgccagcggc gacagaaaga
     6841 taaccagcag gaacagcaga ccaacaacca ctgccgtcag accggtacga ccgccaacca
     6901 atacgccgga agaggactca atataagccg taacggaaga agtaccgata aacgaaccgg
     6961 tcacggaaga gatactgtcg acatacagcg cctgcttcat gcgcgggaat ttacccttct
     7021 catccgccag gcctgcttta tcggtcacgc caatcagcgt accggaggag tcaaacaggt
     7081 tgaccagcat gaaagagaat atcacccctg ccagcccgag gttaaacgac ccggctaaat
     7141 ctacatggcc cacgacagtc attacgctcg gcggcgcaga aacgatgcca ttgtagtgga
     7201 catcacccag catccagccc agcagcgttg tcaccacgat ggaaaccagc accgccgcgt
     7261 gaatgttgcg cgaggccaga atagcgatga tgaagaagcc gaggatcccc agcagcacgc
     7321 tgtgagaagt caggttaccg atgctgacca gcgtttccgg gttagcgaca atcacacctg
     7381 cattcttcag tcccatcata ccaatgaaca gaccgatacc gctggtgatg cccacacgca
     7441 gacttaccgg aatgttagca atcatccagt aacgaacgcg gaaaatcgtc agtaacagca
     7501 gaccaatcgc gccccagaag attgcgccca tcccgacttg ccacggcaag cccatagcct
     7561 gtacaacgac aaaagcgaag aatgcattca ggcccatagc gggtgccagt gcaactggca
     7621 ggttagcaaa cagtcccatc ataatactgc cgaatgcagc aatcagacag gtagtaacga
     7681 agacggcgct ggtatccatg ccagcaacgc caagaatttg cgggttaaca aaaacgatgt
     7741 aaaccatcgt caggaaggtg gtaaaaccgg cgatcacttc ggtccgtgcc gtcgtgccat
     7801 gttcgcgcag tttaaacacg cgttccagca tcccctggcc agaagcctgg gttgtgtgtt
     7861 gttgactcat tatctatttc cgaacaagga gggaaaatcc gtcgctatcg tataccaaaa
     7921 tgagacaata tggacggctg aagataactt tttttcattg tatttgctta tacggcaacg
     7981 attgcgtcat gcgaattggc atgacgaaaa cgttaaacta acgataaagg aaagacatgt
     8041 cccagataga agcggtattt ttcgactgcg acggtacgct ggtcgacagt gaagtcattt
     8101 gctcccgcgc atatgtaacg atgtttcagg aatttggtat tacgctcgat cctgaagagg
     8161 tattcaaacg tttcaaaggt gtaaaactgt acgaaattat cgatattgtt tcccttgaac
     8221 atggtgttac gttagcgaaa acagaagctg aacacgttta ccgtgcagaa gtcgctcggc
     8281 tgttcgattc agaactggaa gccatcgaag gggctggagc gctcctgtca gcgatcactg
     8341 cgccaatgtg tgtggtatct aacggcccaa ataacaaaat gcagcattct atgggcaagc
     8401 tgaatatgtt gcactacttc ccggataaac tgttcagcgg ctacgatatt cagcgctgga
     8461 agccagaccc ggcgttaatg ttccatgcgg caaaagcgat gaatgtaaat gtagaaaact
     8521 gcattctggt tgatgactca gttgccggtg cgcaatctgg tatcgacgca ggtatggaag
     8581 tgttctactt ctgcgccgac ccgcacaata agccgatcgt tcacccgaaa gtcaccacct
     8641 ttacccatct ttcgcagtta ccggaactgt ggaaagcgcg tggttgggat attacggcat
     8701 agttcttcac actcccttca cttaccccgc ttaaattggc gctcaaaggt aagtaaaggg
     8761 tgtttgatat gtctgtttca cgtcgggtaa tacatcacgg actttatttt gcggttttag
     8821 gaccgttaat tggtgttctg tttcttgtcc tctacatatt cttcgcaaaa gaaccgctgg
     8881 ttcttttggt aataatacag gtacttccat tgtttctctt attgtcgatt actacgggag
     8941 ctattcctgc attgttaacc ggcgtgatgg tcgcctgtct gccggaaaag atcgggtcac
     9001 agaaaaatta tcgttgtctg gctggtggca taggtggcgt cgttatcacc gagatctatt
     9061 gtgcagttat tgtacatatt aagggcatgg cttcctcgga gttgtttgaa aacattcttt
     9121 ctggtgacag tctcgttgtc cgcatcattc ctgcattgct ggcaggtgtg gtgatgagca
     9181 gaatcattac ccgtctgccc ggattggata tttcatgtcc tgaaacagac tctttaagtt
     9241 aagcgggata ctttatcttt gggctactca aaagcagaca ggatgttact atgactcaaa
     9301 atatcaggcc gttaccccaa ttcaaatatc atcccaagcc actggaaaca ggcgcatttg
     9361 aacaggataa aaccgtagag tgcgattgct gtgaacaaca gacgtcagtt tattactcgg
     9421 gtccctttta ttgcgttgat gaagttgaac atctctgtcc gtggtgtatt gcggacggtt
     9481 ctgctgctga aaagtttgca ggtagttttc aggatgatgc cagcatagaa ggtgttgaat
     9541 ttgagtatga tgaagaggac gaatttgccg gtattaagaa cacatatcct gatgaaatgc
     9601 tgaaagagtt ggttgaacgc acgccaggtt atcatggatg gcaacaggaa ttctggcttg
     9661 cgcattgtgg cgatttctgt gcttttatcg gctatgtggg ctggaatgat ataaaagatc
     9721 gcctcgatga atttgccaac cttgaagaag attgtgagaa tttcggtatt agaaattctg
     9781 atctagctaa atgcctgcaa aagggtggtg attgtcaggg ttatctcttc cgctgtctcc
     9841 actgcggcaa gctgagactg tggggtgatt tttcgtagtt atttaaataa tgagaacagg
     9901 ccggagcgta attcatacat ccggccttat ttcttcagct taaccgagcg ctaattctgc
     9961 ggcagcggct ttatcagcga ttaccatcag cgaaggatgc agctgcaaca cggaagctgg
    10021 aacatcttcg gtaaccggac cttgcagcac atttttcagt gcctgcgctt tacctgcgcc
    10081 actgacaatt atcagcaagt ttttcgccgc catgatgctt ttcggcccca tcgtcacgta
    10141 gctgtcaggc actaacgaaa agtcgccgcc caactcacca tgcgccacaa tatcaaccat
    10201 ctctccctgg atcgggaact ccacggtttg ctcatggaaa tgggtcgtat tcggcaaatt
    10261 gccacaaaaa tgaccatctg cacctaatcc cagcaccacc aaatccaggc cgccttcacg
    10321 cgccagtttc tgatcatgct cgcggtagtt atcaatagtg agcttctgga tattctcttc
    10381 tttgatcccc gcaggggtga aaaacagatt acgcagattg gtaatcgtta caccttctcc
    10441 ctctttgccg cgaaagggaa tttcatcgaa attatagaaa tagcagttat cgtaccaggg
    10501 cttaccttta accagggtgg tgaggtattc atacatgcct ttgggcgtgc taccggcggt
    10561 aattgccagg ttaacacgac gcgtcttcga catataacca agcagatggt gtgccgcgac
    10621 acggctcatt tcctggtaat cttcggtaat gattaatttc atcttagtgc cttattttat
    10681 ttaaataatt tctgtacgaa ggctgcatag gcaggccgcc agacatccat ttcatggttc
    10741 aggccgggat attcctggta atcaaactta atttttttct gctcaagctc agttttcagc
    10801 ccggcgatat ccttgccggt tacgacatct ttatcaccaa cgaccacagt aaaattacgt
    10861 agttgctggt taatagctgc cggatcgttc agccgggccg cgacaccttc atccggtacg
    10921 gttgtcgtgg taacaccact gaatgtggcc agccagccaa agctttccag atgattcatt
    10981 ccggaaacca gcgcctggta cccgccttgt gaaagccctg ccagcgcgcg accatcggca
    11041 tctttacgga cattaaaacg cttgctaatc agcgggataa tatcgttcat cagttcgcga
    11101 tctgccgctt tagcattcag cggataaaag actttacgtc tttcctgagg cacgaaatct
    11161 tcgggaataa tgcccttcgc atcggtttcg gtatccggga tcaccaccag catcggttta
    11221 attttccctt cagccagcag gttatccatg atttgcggga tacgcccctg atcgatagcg
    11281 gaacgtccgg tatcaccaaa accgtgatag aaatagagca ctggcaaagg ctcgcccatg
    11341 ccggtgtatc ctggcggggt ccagacatac atctgacgtt cagattgcaa tgcgttggag
    11401 tggtaagtta tggcgatcaa atcaccatgc gcaacagaac gcgtatccag ataactgcct
    11461 ggcaccagaa tcatactgga gttaacctgg cgctgaggct tagtcattgc ggtgcctgta
    11521 tcaatgctgc gtacaccatc aacattgaaa aaatactcgt acaggttgcc tttcaggata
    11581 ggtgtgcgcc acgaccagac tcctgcttcg tctttggtca tcgggtgaat attgtccgga
    11641 accggaccac ccaccactac agagacattt tttgcgccag gggcaaagta gcgaaaggtc
    11701 acgctgttat cggcattgac ctgagtcaca tactgtttca ccgggatagt gggtgccggg
    11761 ctggctggca tatccgctgc tatgacccac tgagcagaaa taccgctggc aatagccagc
    11821 gttaaagcag caatttttat attcatcgta atattccttt cattaagttc cattaccacc
    11881 agatttcagc ctgggcaccg acagcaaact ggtcgtcttt attgtcttcg aaggtgaagc
    11941 catccagttc gttttccagg gctttgatat acgtggcgta gaaacgaatt tccggacgcg
    12001 aggtcaacat actggtattg actttaaagg tatggaagag cgtggtttta taaccagact
    12061 cattaaattt attactattc gcatctttgt tttgctgggt gaaatagccc agttcaacac
    12121 ctgtctggtt atattggtcc caaatatagg ccgggcgaac aaccgcacga atagattcga
    12181 aatcagagtg tgcgcctgtt tcgtagctat aaatatcgtt accgaaggag taaacaatcg
    12241 cgttagctac aataaaatga tcgccgatat aggcttcgcc ctgcgaagtc agacgaactg
    12301 ctgttccacc agtgtgatca ccataataac gaccattaaa ggtggtaaat ggacttgcgc
    12361 cagcataacg gccaaagtta ctggcgatag aattattcgc gaccaggaag gagaattcgt
    12421 tgaagccacc tttatcaaat ttctgcgtta aagatgtgcc aaacatccag gtatctttcc
    12481 agtcataata gccgttatta tcctgattat ctttttccga tgcgctttcg tttgccgtga
    12541 cataacgacc acttaccatt aaggtggctt tatcccataa cgggatatct ttatagcgta
    12601 aatcaatggt attggtatta atctgctgtt tgttttgcag gctgcgatcg taatcatcga
    12661 catcttcgcg aaccagcgcg atatcaattt tacccggacc gactttccag ttttccagac
    12721 ctacacccgc tgcggcatca gtacgctgcg ttttccagtc aagcatctgg atttcaattt
    12781 tcggcgcacc gtgtttaccc acccagaaat cagcctctgg cgcaaagggc aggaaacctt
    12841 tggtggtaac gtacatatcg gagaactgca taaagttctc gccaccggcg ttatcgccaa
    12901 accagccggt agagtactgc tgaccaacgt taccatccat catcacaacg gcatcaaccc
    12961 gtttgccgtt ttcgttgtag acacgttgtt ttaactgcaa atcaaaccag ccggagtatt
    13021 cgttaccaaa gcggcccaga gaaccaatcg cccatgattt aggtgaacca taagaggcgg
    13081 tcccccaacc agaacggtaa tagccgttgt aactaaagcc aatttcatct ttcacaaact
    13141 tactgaaatc tttcagagtc atggaagaat aaatcgagcc tgtctcactg gcatttttct
    13201 cttcattttt gaccagtaca gcatcaggtt ttgcggcact actggtcggg aacggattgg
    13261 cggcataccc ttgatcattc gtacttacgc tacgattcac cgtcgctggc gtatattttt
    13321 tcttctcttc atctttatac tttttgagtt cgctttgcgt ttctcttaac gctttttcta
    13381 ataactcaag gcgttgttcc accgttaatg attcagccaa tgattgtgca gaaaaggcta
    13441 acggtgccat taataagatg gcagaggtaa taagatttcg tctaaacata atatcccttt
    13501 atggtgcaaa gaaagaatta acgtatcgca tccagactgt tctgaatgcg acgataatta
    13561 aggtgcttta ttggttattt ttttaatgac agcccccgcg ttttgatcac ttctgcatac
    13621 catccgaagc ttttcttacg cgttcttgtg aggcttcctt cgccattatc atcacgatcc
    13681 acataaataa agccgtagcg cttagacatt tgtgaatgag atgcactgac taaatcaatt
    13741 ggcccccaac tggtgtaccc cataatatcc acaccatcgg caatcgcttc atttacctgt
    13801 accaggtgat cgtttaaata ggcaattcga taatcgtcct gtatcgaacc atccgcttca
    13861 acgctgtctt ttacgcctaa tccgttctcg acaataaata acggtttttg ataacgatcc
    13921 caaagcgtat ttaacagaac ccgtaatcca accggatcaa tttgccaccc ccactctgaa
    13981 cttttcagat gcggattggg gatcatattc agtatgttgc cctgcgcatt tttattaatg
    14041 ctttcgtcgt gggaaacaca accagtcatg taataactaa aagagatgaa atctacagta
    14101 tgttttaaat cttctgcgtc actttcagtc atctcaatgg tgatattgtg gtcgcggaag
    14161 aaacgctgca tatagccggg atactggcca cgcgcctgaa catcaccaaa gaacatccag
    14221 cgccggttct cttccatggc ctgcaacata tcctgtggct ggcaggtgag ggggtaaacc
    14281 agcccaccga gaagcatatt gccgattttc gcttcgggga gcaggctatg acaggcttta
    14341 actgcccgcg cactggcaac cagttgatgg tggatagcct gataaacttc cgcctcgcca
    14401 ctctcttctg ccagccccac gcccgtgaat ggctcgtgta acgacatgtt gatttcatta
    14461 aacgtcagcc ataacgccac tttatgttgg tagcgagtaa agaccgtgcg ggcgtaatgc
    14521 tcgaagtgat cgatgaccgc tcgattagcc caaccgccgt agtttttcac cagcccatat
    14581 ggcatttcgt aatgggataa cgttaccagc ggcttgatcc ccgcctgcgc catttcatca
    14641 aacagccgat cgtaaaacgc taaccccgct tcattcggtt cgacttcgtc gccctgaggg
    14701 aaaattcgcg cccaggcaat ggaaatacgc agacaggtga agcccatctc ggcaaataac
    14761 gcgatatctt ccgggtaacg gtgataaaaa tcgatggcga catctttgat attctctttc
    14821 cccaggatgc gcggttccat ttttcccatt acgccatgag gctgtaaatc tgaggtcgag
    14881 atccctttgc catcttcctg ccaggcacct tccacctgat tggcagctgt tgcgccaccc
    14941 caaagaaatg tttctggaaa tgctttcata attaactcct tttatcgtta gcgaatgatg
    15001 gataacagcg gttcacctgc gcttatctgc gccgtgccgt ggggtaatac gtccgtaaaa
    15061 tcatcgctat tactgattaa taccggcgtc gtcagatcaa atccggcctc gcgaatagca
    15121 gggatatcaa aagaaatcag ccgatcgcct gtattgacct tgtcacccac gttgacgtga
    15181 gcggaaaaga atttgccgtc cagttttacg gtgtcgatac cgacatgaat caggagctcc
    15241 acaccatcat ctgactcaat gccaatggcg tgtaatgtgg cgaacaacga agcaattcga
    15301 cccgcaaccg gagaacgcac ttcaccaacc gagggcagaa tggcgatacc tttacccaac
    15361 aggccactgg caaacgtggt atcagcgacg tgaatgagcg gcacaatctc tcccgtcatc
    15421 ggtgaacaga taccgccctg ctcaggtggt gtaataacct ctggtgtttt ctcttgcggg
    15481 gcaccctgcg ctggctgacg tttagcggtg atgaaatgaa gcatcaccgt accgacaaat
    15541 gcgcaaccga tggcaatgac accgccaata acgctggccc agacggtgaa atcaattccc
    15601 gttgacggga tggtttgcat gaaggtgaaa atacttggca aaccaaagga gtacactttc
    15661 gtttgcgcgt agccaatgat ggtggccccc aaagccccac tgatacaggc gataacaaag
    15721 gggtacttac gcggcagatt aacgccatat accgctggtt cggtgatacc aaacaggccc
    15781 gtcaacgccg ctgatcccgc caccactttt ttctgcgcat cgcgttcgca gaggaagacg
    15841 ccgagcgccg ccccgacctg cgccataatg gcgggcatta acagcgggat catggtgtcg
    15901 tagcccagca cggtgaagtt attgatacac agcggcacca ggccccagtg cagtccgaac
    15961 atgacgaaga tttgccagaa gccgcccatt accgcgcccg caaatgcagg aaccgcctga
    16021 taaagccaga gataaccggc agcaatcagt tcgcttatcc aggttgatag cggccccacc
    16081 agcagaaagg tgacgggtgt gataaccatc agacatagca atggtgtgaa gaaatttttg
    16141 attgccgacg gtaaccacgc attaagtcgg cgttccagaa tgctgcacaa ccaggcagaa
    16201 aaaataatgg gaataaccga tgacgagtaa ttcaacaatg tgaccggaat acccaggaaa
    16261 tccagcccca gctcatccgc tttttgcccg ttctcgaaag cagtcagaat taatggatgc
    16321 actaacgctc caccaatcac catggcagta aatggattac cgccgaagcg tttccccgcg
    16381 gtgtatccca ggattatcgg gaagaaccaa aacaaggcat cactggcgct gaataaaatt
    16441 aaataagtac cactttgttc ggtcgtccac tgaaaagtga gcgccagagc cagcatacct
    16501 ttcaggatcc cggttgccgc catcaaaccg atcagaggcg taaaaatacc tgaaataaca
    16561 taaacaaagc ggtttagcag attacctttc tcatcatttt ccggtgcctg ttgcgctttt
    16621 tcgccaaggc ctgccacgct gttaaccgcc aggaagacat cggccatatg gttacctatg
    16681 accacctgaa actggccacc gctttccacc accataataa taccgggggt gtttttcagt
    16741 acctcagctt gcgctttgct ttcatccttt aacttaaaac gtaatcgcgt tgcgcaatgc
    16801 atcagactaa caatgttatc tgcgcccccg actcctgcga ctatttttct ggctaactcc
    16861 gtcataactt gccctctacc gctttgcggc aaaactccaa aaaaaaacct gaaaaaaacg
    16921 gcctgacgtg aatcaagcaa tttttttcag gttttgcccg cttagtgcgg taacaatcct
    16981 ttactcagta ataatatttc agtgttcttt gcgcacgcgt tctatattta tggctaaaaa
    17041 cataatctct gcgggtgaaa ttttacgttg atactgcaaa ccaataaaaa tggcgatccg
    17101 ttccgcacat tgccatgctt gcgggtaatt ttgttttact gcttgttgta atgattcatc
    17161 actatcgtta attgaagcat gttcaagaat acgccaggat aaaaacttca gatgtgtaac
    17221 cagtcgctga taactcaagc tttcttcctg gtaattaagg ctgaactgaa attttattaa
    17281 ttgcagcatt tcgcgcatta actgcgtgac acctgcaaca tcctccatat ttccgctcat
    17341 ttgggcactg accagatgca tggcaataaa gcccacttca tctttcggta actgcacgcc
    17401 caaccgttta tcaataatgg ttaacgcttc ttcccctagc tggaactctt tcgggtaaag
    17461 ccgctggata tcccacagca acgggttggg cagcaacacg ttttgctgaa agcgtttaat
    17521 cgcaaactgg caatggtcag ttagcgagat ataaatactg tcctgtaatt ttcccaagcg
    17581 ctcctgcgct aaagagataa tacgatcaca ggttgccatc acctcaagag gaatatgact
    17641 taagagttcg cttaatcgcc cgttcagttc atgactgctc aaggcatact ctttttctat
    17701 tccacttgag ttaattcttt cgccagcgcg tttttgaaag ccaattcctc gccccatgac
    17761 gactttttcc cgctgttgat catcaataac caccacaaca ttattgttga gaattttggt
    17821 gatttgcatg ttcatagcaa ggaccttttt tataaacaaa aaaacccgac ttcaccagta
    17881 ttctctggtt atgtcaggtt ttgcctgcga atgcagtaac aatccagtca tttattaatg
    17941 gtttttataa cgaacatcca ggttcggaaa ttaatttaat tgcgtgcaga gaaaatagca
    18001 atgcgctatt gataaaaata tgaccatgct cgcagttatt aactttgtgt aattttagga
    18061 atttataaag ttatatataa caaatcccaa taattaagtt attgggattt gtctggtgaa
    18121 ttatttgtcg ctatcttttc ccgccagcag tttatccagc tcatcaccgc ctacatgacg
    18181 gaaatcctgc cccttcacgt agtagaagat aaactcacaa atattctggc agcggtcgcc
    18241 aatacgttcg atagaacgcg cgcagaacag cgcagtaagt acgctcggaa tggtacgcga
    18301 atcttccatc atgtaggtca tcagttgacg aacaatacct tcgtattcct gatcgacttt
    18361 tttatcttca cgataaatac gtaccgcttc gtcaatgtcc atccgcgcga acgcgtccag
    18421 cacgtcgtgc agcatctgga tggtatgacg gcccagcgac tccagactta ccagcaacgg
    18481 ctgatgctgc tgggagaatt tctccagcgc agtacggcag attttgtccg ccacgtcgcc
    18541 aatacgctcc agctcggcaa tggttttact gatcaccata accagtcgca ggtcgctcgc
    18601 cgtcggctga cgtttggcga taatgcgcac gcaggcttca tcgatcgcca cttccatcat
    18661 gttgacgttc ttgtcgcctt cgatcacgcg cttcgccaga tcgctgtcct ggttatgcat
    18721 cgcggtgatt gcatcagaaa gctgctgctc caccatgccg cccatggtca tcacctgcgt
    18781 gcggatactt tccagttcgg cgttgaactg gccggaaata tgtttattaa gattgagact
    18841 gtccataacg cactcctgaa tcaaccgtaa cgaccggtga tgtagtcttc tgtttgtttc
    18901 ttcgctggct tggtgaacag atcgtccgtg ttgctgaact caatcaattc gcccaggtac
    18961 ataaacgccg tgtggtcgga acaacgcgca gcctgctgca tgttgtgggt gacgatcacc
    19021 acggtgtaat cctgcttcag ttcggtgatc agctcttcaa tacgcccggt agagataggg
    19081 tcgagcgccg aacacggttc gtctagcagc agcacttccg ggcgaatggc gataccacgc
    19141 gcaatacaca gacgctgttg ctgaccacca gagagagagt aaccgctctg gtgcaattta
    19201 tctttggttt cgttccacaa tgcggctttg gtcaatgccc actgcacgcg ctcgtccatg
    19261 tcggcacggg agagcttctc aaacagacga acgccaaaag cgatgttgtc gtagatggac
    19321 atcggaaacg gcgtcggttt ctggaacacc atgcccactt tcgcacgcag cagtgcgata
    19381 tcctgagagt tggtcaggat gttgtcgcca tcaagcagaa tttcaccttc cgcacgctgc
    19441 tccgggtaca gttcaaacat tttgttgaag gtacgcagca gcgtcgattt accgcagccg
    19501 gacggcccga taaacgccgt tacctggttt ttagcgatat ccaggttgat gtttttcagg
    19561 gcatggaatt tgccgtagta gaagttcaaa ttacgaacct gaattttact cggggcagtt
    19621 tcaaccatac tcattgcaat cttttcctca tcgtgcctga tgcacttcgc taatcaggct
    19681 taccgtaggc cggatcaggc gttcacgccg catccggcaa agtgttaacc gtgtttattc
    19741 ttcgcaaaaa caacgcgcgc cagaatgttc agcagcagta cgcacagggt aatgatcaat
    19801 accccggccc aggccagttg ctgccattcc gcaaacggac tcatcgcaaa cttaaagatc
    19861 gtcaccggca ggttggcgat cggctgcatc atgtccgtgc tccagaactg gttggagagc
    19921 gcggtaaaca gcagcggcgc ggtttcacca gcaatacggg caatcgccag caagataccg
    19981 gtcatgatcc cggacaccga cgctttcagc gtaatcgcgg agatcatctt ccacttcggt
    20041 gtacccagcg cataagccgc ttcacgcagg ctgtccggca ccagtttcag catgttctcg
    20101 gtggtgcgga taacaatcgg cacctgcaac agcgccagcg caattacgcc cgcccagccg
    20161 gagaagtgct ccatctgtgc caccacgatg gtgtagacaa acagaccaac cacaatcgac
    20221 ggcgcggaga gcagaatgtc gttaatgaag cgaatcactt ctgccagcca ggatttacga
    20281 ccatattccg ccagataaat ccccgccata atgcccagcg gcgtaccgaa taccgtggcc
    20341 cacaaaatta acagcccgct acccgccagg gcgttagcca gaccaccacc ttccgtattg
    20401 ggcggcggcg tcatttcagt gaacagcgcc agcgacatac cgtcgatacc gcgagtgatg
    20461 gtggacatta aaatccagat cagccagaac aggccgaagg ccatcgtcgc catcgagagc
    20521 gtcagcgcaa tacggttttt gaggcggcga cgcgcctgca ttttgcggcg agattcagcc
    20581 agcgccgcag tggtttgcat ttcaaccata gccattagcg tgccccctca ttcttagcca
    20641 ggcgcataat cataaacttc gatgcggcga ggacgatgaa ggtaatcaca aacaggatca
    20701 ggcccagttc catcagtgcg gcaacgtgca gaccggattc cgcttccgca aattcgttcg
    20761 ccagcgcaga ggtgatactg ttgcccggca tatacagcga ggcgctgtcg agctggtagg
    20821 tgttaccgat gataaaggtc accgccatgg tttcaccgag cgcgcggccc agccccagca
    20881 tgatgccgcc gataacacca tttttggtga acggaagaac gatacgccag ataacttccc
    20941 aggtggtgca gccaataccg taggccgact ctttcatcat caccggggtt tgttcgaaca
    21001 catcacgcat taccgccgca atgtacggaa taatcatgat ggcgaggatc acgcctgccg
    21061 cgaggatacc gataccaaat gcggggccag agaacagcgc gccaacaatc gggatattcg
    21121 acatgatatt gccgaccggc tcctgaaagt aaacggcgaa cagcggcgca aagataaaca
    21181 ggccccacat gccgtaaacg atacttggaa tggctgccag cagctcaatg gcgataccca
    21241 gcgggcgttt cagccagcca ggcgcaagct cagtcaggaa cagggcgata ccgaaactca
    21301 ccgggacggc gatcagcagc gcgataaacg aagtcaccaa cgtaccgtag atcggcacca
    21361 gcgccccgta gatatcgttc ggtgcatccc actctttggt ccataggaaa gccagaccaa
    21421 atttctgaat gctcggccag gaggagatga tcagagagac aataatgcca cccaacatca
    21481 atagcacaat cagcgccgcc agttttacca gcacgctgaa aattatgtcg ccctttttac
    21541 ccggtgggtt aaaagcaggc ttggttgcag ccataagtta ctcttcagtt aaacgcgttt
    21601 acaaagtcat tttgtaatgc cggatgcggc gtaaaacacc gtacccggcc tggagtttta
    21661 ttagtacagc ggcttaccgc tactgtcttt aatattggtc ttccacgcag cgcgaacctg
    21721 ttcaactaca ctatccggca ggctggcgta atccaggtcg ttcgcctgtt tagccccggt
    21781 tttgtacgcc cagtcgaaga atttcagcac ttctgtgcct tgttctggtt tcttctgatc
    21841 tttgtggatc agaatgaacg tggtagaggt aataggccat gcatcttcgc ctttctggtt
    21901 ggtcagatcc tgagcgaagg ttttgctcca gtctgcacct tttgctgcat tagcgaagtt
    21961 ttcttcggtc ggactaaccg gtttaccatc agcggagatc agtttggtgt acgccaggtt
    22021 gttctgcttc gcgtaagcat attcaacata accaattgca cccggcagac gctgaacgaa
    22081 cgcggcgata ccgtcgttac ctttaccgcc cagaccgatc ggccatttta cggtagagcc
    22141 agtaccaacg ttgtttttcc actcttcgtt cactttcgcc aggtagctgg tgaagacgaa
    22201 ggaagtcccg gagccatctg cgcggcgtac tacagcaatg ttttgtgaag gcagtttcag
    22261 acccggattc agtttggcga tggcttcatc atcccacttc ttgattttgc ccaggtagat
    22321 gtcgccgagg gttttaccat ccagcaccag ttcgccagac ttcagccctg gaatgttaac
    22381 cgccagcacc acgccgccaa tcacggtcgg gaactggaac agaccttcct gagccagttt
    22441 ttcgtcagac agcggcgcgt cagaggcacc aaaatcaacg gtattagcga taatctgttt
    22501 tacgccaccg gaagaaccga taccctggta gttaacttta ttaccggttt ctttctggta
    22561 agtgtcagcc catttggcat acaccggcgc agggaaggtt gcacctgcac ctgtcaggct
    22621 tgcttctgca aacacagaga aagcgctcat cgataaggtc gcggcgacaa cagttgcgac
    22681 ggtggtacgc ataactttca taatgtctcc tgggaggatt cataaagcat tgtttgttgg
    22741 ctacgagaag caaaatagga caaacaggtg acagttatat gtaaggaata tgacattttt
    22801 atgacagaaa ggaattacca aataacttac tgattttaaa tgtgaagatg aaaatcccac
    22861 atgtcatctt tttgtcatga tgcatttaaa agtgataaag aaatgggtga gatgacaacg
    22921 atgtgatgaa caatcgttgt cagacctatt agcgcacaat ctcaacagtt atcgtcgctg
    22981 ttgcagtaaa ttgccccggg gctgggcgag ctccagtaag gctcgcagga gcagctgaaa
    23041 aagttacact acctgatttt tcaccataca ctgttgattt acccatgtct gttggcaact
    23101 caccaccgtt cactttgatt tccttattat ttttgtcgta aatttttatc cccacgttag
    23161 agtttgaagt tacgaccatt gaattgtccg tattgggttc ggtagcataa aaagacgtac
    23221 tgatatcatc ggtattcagt atccccaggt tttcacactc aatagtgacc gttttagtaa
    23281 ttttatgtgt tgttaccgca cttccaacaa cagatgaaaa atctgcagct ggtatttctt
    23341 taaaatcaaa ataaactggc tgtaaattat ttatttcgca actttgcgga gctgtaatat
    23401 cgccccgaat ataaacatca gccatcggct gtgagtaatc caccggggtg tcacggctaa
    23461 ttgttccata caatgtcact atctttgttt caggaataat caattttcct gcaaatgtct
    23521 tcttgatata aaaatatact atcgctttag ccccactaga tatacttaaa ggttcaatgc
    23581 ggttgcaatt gtactttgta ttaccagacg ggttgttagc atgatattca aaaggtgcat
    23641 tcacataccc aaccccaaga atatctatag caatcccaac atcaaggttc ggattaagat
    23701 cataataatt aatattagag tgaaccccag cataagttaa tgcctggttt atttttgacg
    23761 tataatagat ataggggaat tctcctacgt taccagtatc acaatgacag cgtccaggat
    23821 atgaggatcc attagttaca gtggtgttaa atgtcgttcc aaccttattt tcgttcgcgg
    23881 taataagata tcccgagaaa tcaagcgtac tgtgaaatac gccattatca ggggtacaga
    23941 tacctttagg agctgcaagt gctacactac ttaacgagag cataaacaca gcaaagcacc
    24001 actgtttgat atacttgttc ataaaaatcc ttttaatgac atgtcacacc ctgttcaatt
    24061 aatccgctct cactttctgg tgtcgaaagt gaataattga agatgcattt tgttgaggcg
    24121 ttttctcccc aggataacgt aacctgtcct ttttctggta gaccagaaag ataaagttcg
    24181 ccacggtcac cgacaattcc tgaatctgcc aaacttgcat cttgtatcgc agcaatggct
    24241 ccaaaaggta ccggtttacc atttgcattt aacactctga agagaacgcg ataacccaca
    24301 tgagtcacaa actccgcttt aaccactgca ccacgcgtgg gaaccatcgt aacgacggta
    24361 ttatcaagtt ctatattcga cttcgagaaa tagttatcgc tgattgctac ccgattttca
    24421 tcataagggt ttagctgtgt cttgaccgta tagccgcgcc agtccgtcgc agcaccgcgc
    24481 atattatcta tttctaaccc ggcggcccca ggtgctttaa caagagcaat agtttcacct
    24541 aactcctgac ttaacgttac cccttcgctg tgtgccagaa ttccccctct gataccataa
    24601 ttcagcctct gggaattttg gctgtagtta tagctgccgt tcaccgtgcc ataagagcca
    24661 tcataggtca gggacatatt accgccaacc tcatcatcat gactgttata ggactgcatt
    24721 aaattccatg aaaggttatt tctttccagc gccgtaccgc tgagtccgag ttgatgtgag
    24781 ctaccggaat tatcgttttg cgaaacagaa taggtggcgt aactattacc ccaccagccc
    24841 gataaaggaa cagataaaga gagcatgtag atctgctcac tggtgttatc actggcatgg
    24901 ttgttccccg tcccctgtct ggcagtattg gaataactcc aggagacgtt ccacgagaga
    24961 cgcttccagc tactgctgta gccaaattgc attaatcgtt cgacatcatc ggtatgccag
    25021 tattgttgcc ggcttaatgt caggtataaa ttgccataat ctctccccaa cgactgcgtt
    25081 agcgttccct ccacgcgact acgtcggtta cctgtttccc aaaagtattc agggctgttg
    25141 cgccgcgatg cccactcatt gagggtatag tagccctcgg tggagtaacg atagccaacc
    25201 aggcgcaagc tagtgtctgt gtcgtcaaat cgttttgaat agagaaagcg atatgactga
    25261 cccgtttctg tatcatcatg gctaaaattc gcacgagcat gtgtcacatc gaaagaaatt
    25321 gcgcccaaag cgccaagatc tttaccgaca cccagagctg cagaaccata attttcagca
    25381 gcctgcatac ctccatataa agtgatcccg tgggaaaaac catgaagtat ttgcgcctga
    25441 aggacgtccg gtgtaaatcc gtcttcatcg cgcaattcac ccacgctgac atcaacatct
    25501 gtctgacctt cacgtttaag aatcgccaat gaagcataag gttgggtgaa tcgttgttcg
    25561 ctaccgtctt cttctttgat ggttacgtcc aaatcgccac ctgtactggc ggtgttgaga
    25621 tcggtgatct caaaagcacc ttgtggaacg gcagactgat aaatcacgta gccattctgc
    25681 cgaatgatga cggtggcgtt ggactttgca atcccacgaa ccacaggagc aaagccattc
    25741 tggctggcgg gtagcatatc gttatcagta tacaaacgcg cgccgcgaat ttgcgtactg
    25801 tcgaaaatat cgctcgccgt ccacgtatca ccaatcataa tctggcttct taacgcggca
    25861 atatcgcgct gtatccaggt actaatggag ttgtattccg cacggccatc gctggtgttt
    25921 aaagtactgt aattacgtag ccgccacggt ccaatattca gtccattgcg cagattgaga
    25981 taactggtat ctgtctcttg tgaaccataa tctgaacgta gtgtatgtga accagaaaaa
    26041 tcgtagttga tggtgagcgc gttaatcccc tcatcccaac gcgtggggct gatgtaatca
    26101 taagccatcg cgtccatgta gatttgggga atggatatat tcagctgcaa tttatcactg
    26161 tcaaactgcc aggatgagcc ttcaatacgt ggagcaggat cgaggcaaac cgtctcatcc
    26221 acatcattga acgatttgag cgcatcaact tttatgccaa aggaggacag tgttttttta
    26281 atggcaataa agcaagcgtg cagatcagca tctggattat cctgaacaaa tgtcacatcc
    26341 tgacgttcaa acattttacc gttgataaaa atatcaacgc tataaacacc tgggggcatc
    26401 aggtttgccc gattaaactg gcgaatatcg actccggatt gatggtcgat ttccagaagc
    26461 gccggattga atacactgac ctcggccatc aggttttgcg agaaaatcag acacgtccct
    26521 gccgtgaggc caaccactat tctggtcgtc atcataatac gcctatcctt atcccttgct
    26581 tacagcgtca tttttatcgg gtcactgact gcgccgtaat cattaataaa tcgccaggtc
    26641 atttggcctc ccgcagaatt agcaggtaaa ggtaacgtga gcgtttcaaa aggacggatc
    26701 atattgaggg gcacatcatg gccatcaacg atgacatcca tcacactgat atgaattggg
    26761 ttgggattct ctgctatcag atttcgccct tcccggcgcc atttcacttt cggtgcagca
    26821 tcttcgggaa taaggcggat atttgctggt cgccagaaca gcttgatacg cgtttttact
    26881 gctatttcca gcgagttcgt cgctttgttg ctcgctgatg gcggaatatt tttaatattc
    26941 agccagaaga ctgactcgcg atcatcaggc aatgacacac ctttggtgtg aataatgcgt
    27001 aatatttttt cttgcgaagg ttctaatcgt gatactggcg gaataacggt aaacggcgct
    27061 ttgcttttat cctctttatt aaatggatct acccaagcct ggatgagata aggtattttt
    27121 tcttctttgc taaatacaga aatagattta tcagcattat tacttaagta aaccacccgc
    27181 gtaccgccaa tgacaacgcc tgcataagtt aatgctggtt ggcctaaaaa aacgctgagt
    27241 ataatcgcgg taaataactt acatgaaact gttgttttaa agagcctgat taaacaactt
    27301 tttctggaca taacgactcc ctggccaaag ccaactgaat aaaaaggccc ttgataaatt
    27361 atttcttata ttcgacagta aattgtgaat ccgcgttcgc cgtaccagcc gttacggtcg
    27421 cattggttgc cacatagcgt gcaataaact tcatttcagc cttgccttca gcatcgatag
    27481 cggtataagc agagtcgtta taaagtttaa cctgcgaatt atcggactgg ttaaaaatac
    27541 gaataccaac gccggttgcc gcaatcgctt gtcctgtacc ggtaaaatca ccagggttgc
    27601 ctgctgtaag cggcgtaccc actttcaggt cgccgtcgcc gccaggcgct tctgtaccat
    27661 caaaacgaac ggctgcttga gtgtacgttg ccgggcaatt ttcaagttta atactgaact
    27721 tctgtggcga cgccagacta cctacacctg aaaatgcatt tttactgact ttacccagtg
    27781 ggacaatttg atcggctgta tcggaggtaa cttcacaagt agtgtcgaca atttcaccga
    27841 cgaagtgaac aacaccatct tctgccagtg catgcccggc cagcattaga gatgccagag
    27901 tgaatgcacc gcctataata ttacgc
//
LOCUS       DAPGWB010000053        27804 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.053, whole genome shotgun sequence.
ACCESSION   DAPGWB010000053 DAPGWB010000000
VERSION     DAPGWB010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 27804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27804
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.053"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(444..1019)
                     /locus_tag="RHX79_002151"
     CDS             complement(444..1019)
                     /locus_tag="RHX79_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001514083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLATT domain-containing protein"
                     /protein_id="HDV2197321.1"
                     /translation="MTQSEMLKLIARHGYNVGFGAKKNFATYDLICKASGWISFISLA
                     VGVFALFIPELATNVISAILIIFGVATMYIQFYDSEKQSYESAGIEQTKIFNELEVIY
                     RNVKSDANFDYQRTQQSIDAIMSRFYGTVISKQIFGSNWYAHYKFYCEFEKAWVEEEL
                     NLTLKDKIPLSLCFLAGLAIIFTIAVIWKTP"
     gene            complement(1027..2355)
                     /locus_tag="RHX79_002152"
     CDS             complement(1027..2355)
                     /locus_tag="RHX79_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000019626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HDV2197322.1"
                     /translation="MSHRELFSEFLENLNLDLKQAKKISYHYRKITKSLNLAFRGTSS
                     RVANRLKVGSVGRHTAIKGISDLDMLYIMPPNQYEYYNRKDNGQSALLTDVRNILAEE
                     YPDQTVKKDRLVVQIIFKNFYVEVQPVFRQDDDSFKFPESYNGGAWRITKPLHEKAAM
                     TAFSRDKSNNLRKLCKMIRAWKNLHGVNMGGLLIDTLAYRFLSSTSDYDNTGNGSLGA
                     LARDFFEYLSNEERKERYLALGSNQHVRVKSPWFGRAAKHAYELCCDALDAEGAASEN
                     DRWRKVFGRAFPRRKVGIMEARLGLESHAADAVPWTDTEEFIEDKYPVDIRYSLNLDC
                     TVTQDGFPPRSLREMLTRRFRLSARKSLLFRADLTEMEAEEPYTVMWKVLNVGDEARR
                     RNMIRGQIVSDGGYCTKKETTDFRGDHMVECYVIKNEVVVARAQIEVPIS"
     gene            complement(2490..2933)
                     /locus_tag="RHX79_002153"
                     /pseudo
     CDS             complement(2490..2933)
                     /locus_tag="RHX79_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            2988..3302
                     /locus_tag="RHX79_002154"
                     /pseudo
     CDS             2988..3302
                     /locus_tag="RHX79_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
     gene            complement(3312..3704)
                     /locus_tag="RHX79_002155"
                     /pseudo
     CDS             complement(3312..3704)
                     /locus_tag="RHX79_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707145.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
     gene            complement(3736..3916)
                     /locus_tag="RHX79_002156"
                     /pseudo
     CDS             complement(3736..3916)
                     /locus_tag="RHX79_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(4085..5347)
                     /locus_tag="RHX79_002157"
     CDS             complement(4085..5347)
                     /locus_tag="RHX79_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HDV2197323.1"
                     /translation="MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRI
                     LGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLSFEHIA
                     RRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEI
                     ASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDG
                     YKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGS
                     KMRTPHLVPLSKQAVAILAELQTWAGENGLIFTGAHDPCKPISENTVNKALRVMGYDT
                     TQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLML
                     QWWADFLNANREKCISPFDYAKINNPLK"
     gene            complement(5545..5620)
                     /locus_tag="RHX79_002158"
     tRNA            complement(5545..5620)
                     /locus_tag="RHX79_002158"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5585..5587),aa:Phe,seq:gaa)
     gene            complement(5726..6433)
                     /locus_tag="RHX79_002159"
     CDS             complement(5726..6433)
                     /locus_tag="RHX79_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HDV2197324.1"
                     /translation="MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLG
                     IGILLVVKCANLPAMVLATLLGALIGEICLLEKCVNTAVAKAQNLFRHSRKKPAHESF
                     IQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVI
                     SIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLP
                     ALLLAMPLSAAWTAWFA"
     gene            6831..8966
                     /gene="speC"
                     /locus_tag="RHX79_002160"
     CDS             6831..8966
                     /gene="speC"
                     /locus_tag="RHX79_002160"
                     /EC_number="4.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
                     /protein_id="HDV2197325.1"
                     /translation="MKSMNIAASSELVSRLSSHRRVVALGDTDFTDVAAVVITAADSR
                     SGILALLKRTGFHLPVFLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLLPP
                     FYDTLTQYVEMGNSTFACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGD
                     LLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKS
                     NHHGALIQAGATPVYLEASRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKAELPRPFR
                     LAIIQLGTYDGTVYNARQVIDTVGHLCDYILFDSAWVGYEQFIPMMADSSPLLLELNE
                     NDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYP
                     LFAALDVNAKIHEGESGRRLWAECVELGIESRKAILARCKLFRPFIPPVVDGKLWQDY
                     PTSVLASDRRFFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGINAETGEYSDFGVP
                     ATILAHYLRENGIVPEKCDLNSILFLLTPAESYEKLAQLVAMLAQFEQHIEDDSPLAE
                     VLPSVYNKYPVRYRDYTLRQLCQEMHDLYVSFDVKDLQKAMFRQQSFPSVVMNPQDAH
                     SAYIRGEVELVRIRDAEGRIAAEGALPYPPGVLCVVPGEVWGGAVQRYFLALEEGVNL
                     LPGFSPELQGVYSETDADGMKRLYGYVLK"
     gene            complement(9016..10272)
                     /gene="nupG"
                     /locus_tag="RHX79_002161"
     CDS             complement(9016..10272)
                     /gene="nupG"
                     /locus_tag="RHX79_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupG"
                     /protein_id="HDV2197326.1"
                     /translation="MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVY
                     SSLGIAAVFMPALLGIVADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILIN
                     SFAYMPTLGLINTISYYRLQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHM
                     QLYIGAALSAILVLFTLTLPHIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSM
                     LLGAELQITNMFGNTFLHSFDKDPMFASSFIVQHASIIMSISQISETLFILTIPFFLS
                     RYGIKNVMMISIVAWILRFALFAYGDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVE
                     KEVSPAIRASAQGMFLMMTNGFGCILGGIVSGKVVEMYTQNGITDWQTVWLIFAGYSV
                     VLAFAFMAMFKYKHVRVPTGTQTVSH"
     gene            complement(10474..11553)
                     /gene="mltC"
                     /locus_tag="RHX79_002162"
     CDS             complement(10474..11553)
                     /gene="mltC"
                     /locus_tag="RHX79_002162"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417438.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HDV2197327.1"
                     /translation="MKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQF
                     AHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRA
                     IIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLK
                     NRLQSRNNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTES
                     SFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAM
                     LNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLT
                     TRHPSAESRRYLYKVNTAQKSYRRR"
     gene            complement(11618..11893)
                     /locus_tag="RHX79_002163"
     CDS             complement(11618..11893)
                     /locus_tag="RHX79_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HDV2197328.1"
                     /translation="MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH
                     KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK"
     gene            complement(11921..12973)
                     /gene="mutY"
                     /locus_tag="RHX79_002164"
     CDS             complement(11921..12973)
                     /gene="mutY"
                     /locus_tag="RHX79_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDV2197329.1"
                     /translation="MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQ
                     VATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGG
                     KFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
                     ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWSL
                     YPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRHWLAQ
                     RQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLA
                     APVERLLQQLRTGAPV"
     gene            13134..13853
                     /gene="trmB"
                     /locus_tag="RHX79_002165"
     CDS             13134..13853
                     /gene="trmB"
                     /locus_tag="RHX79_002165"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDV2197330.1"
                     /translation="MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPV
                     MGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA
                     CLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVP
                     FAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTK
                     FEQRGHRLGHGVWDLMFERVK"
     gene            13853..14179
                     /locus_tag="RHX79_002166"
     CDS             13853..14179
                     /locus_tag="RHX79_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HDV2197331.1"
                     /translation="MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDD
                     FINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSEL
                     FDVWWD"
     gene            14363..15082
                     /locus_tag="RHX79_002167"
     CDS             14363..15082
                     /locus_tag="RHX79_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 domain-containing protein"
                     /protein_id="HDV2197332.1"
                     /translation="MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGE
                     NGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIAL
                     DKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLV
                     NQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGK
                     DVCSRVVTLEDSRKALVGNLK"
     gene            15258..16304
                     /gene="ansB"
                     /locus_tag="RHX79_002168"
     CDS             15258..16304
                     /gene="ansB"
                     /locus_tag="RHX79_002168"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HDV2197333.1"
                     /translation="MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATK
                     SNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKT
                     DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAAD
                     KASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARK
                     HTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVF
                     DTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQ
                     TKDPQQIQQIFNQY"
     gene            16421..17428
                     /locus_tag="RHX79_002169"
     CDS             16421..17428
                     /locus_tag="RHX79_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1202 family protein"
                     /protein_id="HDV2197334.1"
                     /translation="MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILK
                     LDAITLKNLDAKGNQATWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAM
                     LTSKGTPASGWSVNFYSFQAAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALN
                     TQKNSIPALEKEVKALDKQMVAAQKAADAYWGKDANGKQMTREEAFKKIHQQRDEFNK
                     QNDSEAFAVKYDKEVYQPAIAACHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLS
                     RKLQDDWVTLEKGQYPLTMKVSEINSKKVAILMKIDDINQANERWKKDTEQLRRNGVI
                     K"
     gene            complement(17583..18719)
                     /gene="hemW"
                     /locus_tag="RHX79_002170"
     CDS             complement(17583..18719)
                     /gene="hemW"
                     /locus_tag="RHX79_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HDV2197335.1"
                     /translation="MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLL
                     NDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANP
                     GTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSF
                     NLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALW
                     DIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDG
                     RILRTTKTRHPRGFMQGRYLESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLC
                     EDVIRPQLDEAIAQGYLTECADYWQITEHGKLFLNSLLELFLAE"
     gene            complement(18712..19305)
                     /locus_tag="RHX79_002171"
     CDS             complement(18712..19305)
                     /locus_tag="RHX79_002171"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HDV2197336.1"
                     /translation="MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGL
                     TFIENAILKARHAAKVTGLPAIADDSGLAVDVLGGAPGIYSARYSGEDATDQKNLQKL
                     LETLKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF
                     FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG"
     gene            complement(19313..19603)
                     /locus_tag="RHX79_002172"
     CDS             complement(19313..19603)
                     /locus_tag="RHX79_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417428.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggU family protein"
                     /protein_id="HDV2197337.1"
                     /translation="MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVD
                     GQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN"
     gene            complement(19600..20166)
                     /gene="yggT"
                     /locus_tag="RHX79_002173"
     CDS             complement(19600..20166)
                     /gene="yggT"
                     /locus_tag="RHX79_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotic shock tolerance protein YggT"
                     /protein_id="HDV2197338.1"
                     /translation="MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVT
                     QPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTI
                     GLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
                     LLYVINMGVAEVLQATGNMLLPGLWMAL"
     gene            complement(20184..20888)
                     /gene="yggS"
                     /locus_tag="RHX79_002174"
     CDS             complement(20184..20888)
                     /gene="yggS"
                     /locus_tag="RHX79_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate homeostasis protein"
                     /protein_id="HDV2197339.1"
                     /translation="MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIA
                     EAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHT
                     IDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL
                     RGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM
                     VRIGTAIFGARDYSKK"
     gene            20906..21886
                     /locus_tag="RHX79_002175"
     CDS             20906..21886
                     /locus_tag="RHX79_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417425.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HDV2197340.1"
                     /translation="MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDV
                     EELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRQGISLALRLLPSHCPQ
                     LEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
                     YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETG
                     HLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVAL
                     FELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQRVGEGRL"
     gene            complement(22062..22478)
                     /gene="ruvX"
                     /locus_tag="RHX79_002176"
     CDS             complement(22062..22478)
                     /gene="ruvX"
                     /locus_tag="RHX79_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDV2197341.1"
                     /translation="MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNL
                     IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVE
                     ARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY"
     gene            complement(22478..23041)
                     /locus_tag="RHX79_002177"
     CDS             complement(22478..23041)
                     /locus_tag="RHX79_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HDV2197342.1"
                     /translation="MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLE
                     NLKIEGILEKLKITPEPRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDN
                     TVMTTSRDVLETLGTDKQPSDVLVALGYASWEKGQLEQEILDNAWLTAPADLNILFKT
                     PIADRWREAAKLIGVDILTMPGVAGHA"
     gene            complement(23150..24100)
                     /gene="gshB"
                     /locus_tag="RHX79_002178"
     CDS             complement(23150..24100)
                     /gene="gshB"
                     /locus_tag="RHX79_002178"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HDV2197343.1"
                     /translation="MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY
                     LINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVILMRKDPPFDTEFIYATYIL
                     ERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILK
                     PLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEP
                     VPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIG
                     DRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ"
     gene            complement(24113..24844)
                     /gene="rsmE"
                     /locus_tag="RHX79_002179"
     CDS             complement(24113..24844)
                     /gene="rsmE"
                     /locus_tag="RHX79_002179"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014226833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDV2197344.1"
                     /translation="MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFD
                     GSNQVFDAEITSASKKSVEVKVLEGKIDDRESPLHIHLGQVMSRGEKMEFTIQKSIEL
                     GVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWC
                     AEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLG
                     PRVLRTETTALTAITALQVRFGDLG"
     gene            complement(24924..25631)
                     /gene="endA"
                     /locus_tag="RHX79_002180"
     CDS             complement(24924..25631)
                     /gene="endA"
                     /locus_tag="RHX79_002180"
                     /EC_number="3.1.21.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease I"
                     /protein_id="HDV2197345.1"
                     /translation="MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPG
                     TFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGG
                     RKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEK
                     AAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKV
                     QGNHNPYVQRACQARKS"
     gene            complement(25726..26223)
                     /locus_tag="RHX79_002181"
     CDS             complement(25726..26223)
                     /locus_tag="RHX79_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HDV2197346.1"
                     /translation="MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRG
                     TSAGTAWLESYEIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWM
                     MESVLGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGE
                     QLVAK"
     gene            complement(26300..27694)
                     /gene="galP"
                     /locus_tag="RHX79_002182"
     CDS             complement(26300..27694)
                     /gene="galP"
                     /locus_tag="RHX79_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/proton symporter"
                     /protein_id="HDV2197347.1"
                     /translation="MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIA
                     DEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAA
                     PNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLS
                     DTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTS
                     AEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPK
                     IFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVL
                     GTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTA
                     TNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERN
                     LMKGRKLREIGAHD"
BASE COUNT         6832 a         6994 c         7143 g         6835 t
ORIGIN      
        1 gatttatata gtttgtaatt agtttaaatg taagcagttc gtcagagtgc gtattccgct
       61 ctattcgatc acggattggc cgttatgacc cgatctcgat ggaagttatt gggtgatccc
      121 cttccatgaa aatatacacc gaagctcccg cagaggtttc cgtgggcgaa ggcatgattc
      181 tgtccgagag ccggatgtgt tagaagcgca tgtccgcttc gatgagcggg gtgtggaaac
      241 aggatttatg gtcaggacag taaggcaccg ccaatcgaaa gaggcggcaa cagatatgcc
      301 tgacctgtaa aattaccgcg ccacatcttg actctacccg ttttccaagc gccccccctt
      361 atagaacgta cactggatgg tgataccggc tatacatcgc atatttgaca gtcagcttgc
      421 tgaatttttc attggctgca gcatcagggc gttttccaga tgacagctat agtaaaaatg
      481 atcgccagac cggcgagaaa gcagagcgaa agcgggattt tgtccttcag tgtcaggttc
      541 agctcttctt caacccatgc tttttcaaat tcacagtaaa atttataatg tgcgtaccag
      601 ttacttccga agatctgttt gctgatgacc gtgccgtaaa accgggacat gatagcgtcg
      661 atggattgtt gtgtacgctg atagtcaaag tttgcatcgc tttttacgtt gcggtagatg
      721 acttcaagtt cattaaaaat tttggtctgc tcaatccccg cactttcata actctgcttt
      781 tccgagtcat aaaactgaat gtacattgta gcaacaccaa atataattaa tatcgcggaa
      841 atgacgtttg tggccagctc aggaataaaa agggcgaaca caccgacagc aagagaaata
      901 aagctaatcc aaccggatgc cttacaaatc agatcatagg tggcaaagtt tttcttagcg
      961 ccaaatccaa cgttataacc atgtcgggcg attaatttca gcatctctga ttgcgtcata
     1021 aaaacctcag cttatgggaa cttcaatctg ggcccgggca accacaacct cattttttat
     1081 cacatagcat tctaccatgt gatctccgcg gaagtcggta gtttctttct tcgtacagta
     1141 gccgccgtcc gaaacgattt gtccccggat catatttctt ctgcgtgctt cgtcacccac
     1201 gttcagtacc ttccacataa cggtgtaggg ttcctctgcc tccatttctg ttaagtctgc
     1261 ccggaaaagg agagattttc gagcggagag gcggaatctt ctggtaagca tctccctcag
     1321 gcttctggga gggaaaccat cctgggttac ggtacagtca aggttgagtg agtacctgat
     1381 atccaccgga tatttatcct ctataaactc ttcggtatcg gtccagggaa cagcatctgc
     1441 cgcatgcgat tccagaccaa gacgggcttc cataataccc actttacgtc tggggaaggc
     1501 tcgtccgaac actttgcgcc agcggtcatt ttcactggca gccccctcag cgtctaaggc
     1561 atcacaacat aattcatacg cgtgtttcgc tgcccggcca aaccagggag atttaacacg
     1621 tacatgctga ttactgccta acgcgagata cctttccttt ctctcctcat ttgacagata
     1681 ttcaaaaaag tctctggcga gggctcccag gctgccattt ccggtattgt cataatctga
     1741 tgttgatgaa agaaagcgat acgctagtgt gtctatcagt aagccaccca tattgacgcc
     1801 atgcaggttc ttccaggctc tgatcatttt acacagcttg cgcagattat tggatttatc
     1861 tcgcgaaaat gcggtcatgg ccgccttttc gtgaagaggt tttgtaatgc gccatgctcc
     1921 tccattatag ctttcaggga atttaaagct gtcatcatcc tgtctgaata caggttgaac
     1981 ctcgacataa aagtttttaa agatgatctg aacaaccagt ctgtcctttt tcacagtctg
     2041 gtcaggatat tcttccgcca gaatgtttct gacatctgta agcaatgcag actgaccatt
     2101 atccttacgg ttataatatt catactgatt ggggggcata atataaagca tatccagatc
     2161 ggatatgcct tttattgcgg tatgtctgcc tactgacccc actttcaagc ggtttgctac
     2221 ccgggaactc gttcctctga acgcaagatt taatgacttg gttatttttc gatagtgata
     2281 gctgatcttt tttgcctgtt tgaggtcaag attcaaattt tcaagaaatt cgctgaacaa
     2341 ttccctgtgg ctcatggtgt ttcctttggc atgtgaaaca ttagcttaca ttatcattac
     2401 accttataaa aaccaagatc ttgggaggtg agcgttctgc atggctttat gacttaaacg
     2461 taagcgttaa cggagtgccg tattgacgct tatttattgg tgagtactac gttccatggc
     2521 aggagttcgt caactcggtt ggaaggccat tccggcagta cgctcaggat atggcgcaga
     2581 tacgcttccg gatcgatacc gttcagtcgg caggtgccga tcagcccgta caacagtgct
     2641 cctcgctcgc cgccgtgatc gctgccgaag aacataaagt ttttctttcc gagacagact
     2701 gcacgaagcg ctctttccgc ggcattatta tccgcctccg ccagaccatc atcacagaag
     2761 ttgcacaacg caacccagtg cttccggata taccggaacg catctctcag acggcatttt
     2821 ttcgataatg tgtgttcttt ctcctgcatc agcttataca gggaagtcag tagcggttta
     2881 ctctgcattt gcctgaccgc caggcgttca gacaccggca acccgcgtat ttcggtaacc
     2941 ggctcattta aaccgtctgg tgtgtttcct ccggctccac aaaaataatg tccatcattt
     3001 ttaatggaca ctatcgtatg gaataccgga cctggatcac tgaagcttta cgtcttcact
     3061 ttgaagaaca tttaccacgg attgtggccg gacgtcgcct gggcgtacca aaatcaacag
     3121 tttgtggtat gttcgtgcgc ttccgaaaag ctggcctttc atggcctctg cccgcaggta
     3181 tgtcggagcg ggaacttgat gcccgtcttt acgggagtgc ctccacagta cctgtcgtac
     3241 ttactgaaaa caccgttatg tccgaagtcc cggtggtaaa aaaacgcccc cggcggccta
     3301 atgccagtca gttaagcaac tgactggctc tttttcgggg ctgtggggta tttccagggc
     3361 ctctccttta ccactctcgg gaaggccctt tcccttattg tcggtaattt cacaagttgt
     3421 cccatacttg caagatcgcg catcagctcc ggtatatgtc ccggtgaagc gccctgcaat
     3481 gtcatcagca ttttcatcac cattccgcat gattctgaga aactcagttg attcggccag
     3541 taacctttca gatgttccgc cattttaatc atctgatatc tcaccagatt ataagccagt
     3601 aagacacccc acagctcttg ctccacaagc tccggctttt tacttctcag cgtcagcctg
     3661 ctcagttgca tcgtctgttt tatctccctg tatcccagtt cgattgtaag cggctcgcca
     3721 gaaccgtatt gatatttact gagaggtcag atcaactttc cagggcaaca gatcgcgtac
     3781 ccggtttgcc gaccagtcct gcatatgatc tgtgacgtaa tgcagcaatt tttctgactc
     3841 cgcattgttc agacggcagg tgccgatcag tgagcacaat atgtgctgca tatttgccgc
     3901 cgctgtcgga acctgcagca tattacaggt tattactcga tcccgatgga tgatattggg
     3961 ggatttcttt ccatgaaaat acgtaagagt cgggagtaat ttgtcttacc atcaatcttc
     4021 ttcatcacgc ccaaagaaaa atagtcattc aaagtacccc gggcattttg cccggggatt
     4081 attactattt taatggattg ttgatctttg cataatcaaa cggactgata catttctctc
     4141 tgttcgcatt cagaaaatct gcccaccact gtagcatcag ccggcgttct tccagatgtt
     4201 cggctttatg gatgtaagca gcgcgtacac cgttacgttc ctgatggctc atctgacgtt
     4261 caacagcatc gcgggaccac aaacctgatt cgatcagcgc actacatgcc atcgcacgga
     4321 atccatggcc acagacatcc tgggttgtgt cataccccat caccctcagg gctttattta
     4381 cagtattttc actgattggt ttacacgggt catgtgctcc cgtaaagatc agaccatttt
     4441 caccagccca tgtctgtagt tctgccagta tggctacagc ctgtttgctg agtggcacaa
     4501 gatgtggtgt tcgcatcttg gagccccggt gtgagaattt tacgccaggc agaggttcgc
     4561 gttcggctgg aatagtccac atggcattgt caatatcaat ttcagaccac cgggcgtatc
     4621 tgagttcact ggaacgaata aaaaccagta aattcagcat aacggcaagc cgggtgacag
     4681 gctggccttt ataaccgtca atacgcgaca gaagttcagg caggcgtgaa agattcagag
     4741 cggggcgatg ctggcgtttt accgtggtca atgcaccagc catatccaga gccgggttat
     4801 atctgatgat gccagactgt acggcgtaac gcattacagc agatattctt tgctgcagac
     4861 gactggcgat ttcataaatt tgttttgctt ctgcagcacg aacaggaata agcaggtccg
     4921 gggtattgag tgttgtgata tcccggttgc cgataaaggg gaaaacgtgt gtctcgaggc
     4981 ttttgagtac tttatcgctg tgtgattgtg cccattgttt attactggca tgccagcgtc
     5041 gtgcaatatg ttcaaaagag agctgtaaat cagggacaac ttttttaact cttttctgtt
     5101 cgcaagggtc aatcccctcc gaaatcagtt ttcgggcctc atcccgtttt gtacgagctt
     5161 cggagagaga aacttctgga tacacaccaa gtgccagagt cttctcctta cccagaatac
     5221 gataacggag acgccagtaa cgggaaccat taggatgaac cagcaggaac atgccagccc
     5281 cgtcagtgag tttataagcc ttgtcagtgg gctttgcagc ccggattttt gcgtcagtca
     5341 gtgccatagt acagccttct gaatgcgtta aagagggtac aaattctgtc gaactggggt
     5401 atacccgcaa ttatacccac acaatggggt tgatgtgggg ggaatctggt tgagttcggt
     5461 agaattgatt tgtaggtaga acgcttaaat tgtggcgttc tgaaacgaaa aacggacctc
     5521 cgtggaggtc cgttgatatg aatttggtgc ccggactcgg aatcgaacca aggacacggg
     5581 gattttcaat cccctgctct accgactgag ctatccgggc aacggggcgc attaaacctg
     5641 attcgcctcg tctcgtcaat caaatttctt caatttactg cagactgcac aatctatcat
     5701 cactttgccg ctattgcacg cattgtcagg caaaccaggc ggtccaggcg gcggaaagcg
     5761 gcattgccag aaggagtgct ggaagcatgt tgaccaccgg gaacatttta atgccacaga
     5821 tgcgtaatcc ggttgccagc agcaataaac cgcctacggc gctgaagtct gccatcatcg
     5881 acggtgtggt cagcggtaat atcagcgcgg cagcccacgc cagcgttaac tggatgatca
     5941 gtaatgggat actaattacc gacaccgcaa tacccagcga gcaggcgaag atcatcgccg
     6001 taaagaaatc aagaaatgac ttggcgatta aaatactcgg atcgccggtc atcccttcgt
     6061 tcatcgcccc gaagatcccg gtgccgctgg cgcaaaacag gacaataatc gcgacataat
     6121 tctgaataaa agattcatgc gctggcttct tacgtgagtg acgaaacaga ttttgtgctt
     6181 tggcgactgc tgtattgaca catttctcca gcaaacaaat ttcgccaatt agagcgccaa
     6241 gtagcgtagc taaaaccatc gctggaaggt tggcgcattt cacaaccagt aaaataccaa
     6301 tccccagcga tgccagacca aaaatagatg tcatggagac gcggatacgt tccggtaagc
     6361 gttggctgag cagtgcgccg agaacgccac ccagtaagac tgcactagcg ttgataaaag
     6421 ggccgatgac cacaagagtt cctgttagct gtattgtttg attttcttat tatgaacttt
     6481 ttgccttgtt gatggcttgt ctggtcgcaa agtcctggct tgcacgcttt agcgaaaggt
     6541 gccatgattg cgcgaatttt ctcctctctg tacggagttt gcccgatgca cgccatctcc
     6601 ttacattctc tcgcttatcg ccatttcgcg cgaaacgttt ccctttctat gttactgctc
     6661 atgcggtgaa gttaacgcac gctcactgca ggacaacagt aaaatcagag cgtttctgct
     6721 tttactgatg tctggcggtc ggagctggtg accagtttga cccatatctc atggggcagg
     6781 gttttccacc ttgtccggta ttcttacttc cccgaaacgg gtttgcgctt atgaaatcaa
     6841 tgaatattgc cgccagtagt gaactggtat cccgactttc ttctcatcgt cgcgtggtgg
     6901 cgttgggaga tactgatttt acggacgtcg cggcagtcgt cattaccgct gcggatagtc
     6961 gcagtggcat tcttgcgttg cttaagcgca ccggttttca tctaccggtg tttttgtatt
     7021 ccgaacatgc tgttgaatta cctgcgggcg ttacggcggt aatcaacggc aacgagcagc
     7081 agtggctgga gctggaatcc gcagcctgtc agtatgaaga gaatttgctg ccaccgtttt
     7141 atgacacgct gacgcagtac gttgagatgg gcaacagcac ctttgcttgc cctggacatc
     7201 aacatggtgc gttttttaaa aagcatcctg ccggacgcca tttttacgat ttctttggtg
     7261 agaacgtctt tcgcgccgat atgtgtaacg ctgacgtaaa attgggcgat ctgcttattc
     7321 atgaaggatc ggcgaaagat gcgcagaaat tcgcagccaa agtctttcat gccgataaaa
     7381 cctattttgt gctgaacggc acatcggcag cgaataaagt ggtgacgaat gcgctgttaa
     7441 cgcgtggcga tctggtgctc ttcgaccgta acaaccataa gtcgaatcat cacggcgcgc
     7501 tgattcaggc gggggcgacg ccggtctatc tggaagcttc acgcaacccg tttggtttca
     7561 ttggcggtat tgatgcgcac tgttttaatg aagagtatct gcgccagcaa attcgcgacg
     7621 ttgcgccaga aaaagccgag ctgccgcgcc cgtttcgcct ggcgattatt cagctgggaa
     7681 cctatgacgg aactgtctat aacgcccgtc aggtgatcga taccgttggg catctgtgtg
     7741 attacattct gtttgattcc gcgtgggtcg gttacgaaca atttatcccg atgatggcgg
     7801 atagctcgcc gctgctgtta gaacttaacg aaaacgatcc ggggattttt gtgacccagt
     7861 cggtgcacaa acagcaggct ggattctcac agacgtcgca gatccataaa aaagataacc
     7921 atatccgcgg acaggcgcgt ttttgcccgc ataagcggtt gaataacgcc tttatgctcc
     7981 atgcttctac cagccctttc tatccgctgt ttgctgcact ggatgttaac gccaaaattc
     8041 atgaagggga gagtgggcgt cggctgtggg ctgagtgcgt tgagttgggt attgagtcgc
     8101 gcaaggctat tcttgcgcgc tgtaagctgt tccgcccgtt tatcccgccc gttgttgatg
     8161 gcaaattgtg gcaggattat ccgacatctg tgttagccag cgaccgccgt tttttcagtt
     8221 ttgagccggg ggcgaagtgg cacggctttg aaggatatgc cgcggatcag tattttgttg
     8281 atccgtgcaa gctgttactc actacaccag gtatcaatgc cgaaactggc gaatatagcg
     8341 actttggcgt tccggcgacg attctggcgc actatctgcg tgagaacggc attgtgccgg
     8401 agaagtgcga tctcaactcc attctgttct tattaactcc ggcggaaagc tacgagaagc
     8461 tggcacaact ggtggcgatg ctggcgcaat ttgaacagca tattgaggat gactcgccgc
     8521 tggctgaggt gttgccgagc gtttataaca aatatccggt gcgctatcgc gactacaccc
     8581 tgcgccagtt gtgtcaggag atgcacgatc tgtatgtcag tttcgacgtc aaagacctac
     8641 aaaaagcgat gttccgccag cagagtttcc cgtcagtggt gatgaacccc caggatgcgc
     8701 atagcgctta tattcgcggt gaagtggagt tggtgcggat tcgtgatgcc gaagggcgaa
     8761 ttgcggcaga aggggcgttg ccttatccac ctggcgtgct ttgcgtggta cccggggaag
     8821 tctggggtgg ggcggttcaa cgttatttcc ttgcactgga agaaggggtg aatttgttgc
     8881 cgggattttc gccggagctg caaggtgttt atagcgaaac cgatgcggat ggcatgaaac
     8941 ggttgtacgg ttatgtgttg aagtaagaat aaaaaaaacg ggtcaccttc tggcgacccg
     9001 tttttctttg cgtaattagt ggctaaccgt ctgtgtgcct gtcgggacac gaacgtgttt
     9061 atatttgaac atcgccatga acgcgaaggc cagaaccacg gagtaaccag cgaaaatcaa
     9121 ccatacggtc tgccagtcgg taatgccgtt ttgggtgtac atctcaacaa ctttaccgct
     9181 cacgatgccg ccgaggatac agccgaagcc gttagtcatc atcaggaaca tcccttgtgc
     9241 actggcgcga attgccgggc taacttcttt ttcgacaaac accgaaccag agatgttgaa
     9301 gaagtcgaat gcgcaaccgt aaacgatcat cgacagtacc agcagtacag taccgaacgg
     9361 agtcgggtcg ccgtaagcaa acagcgcaaa acgcaggatc cacgccacaa tactgatcat
     9421 cattacgttc ttaataccgt agcggcttaa gaagaacggg atggtcagaa tgaacagggt
     9481 ttcagagatc tgcgaaatcg acatgatgat tgacgcatgc tgcacaataa agctgctggc
     9541 aaacatcgga tctttgtcga agctgtgcag gaaggtatta ccgaacatgt tggtaatctg
     9601 cagttccgcg cccagcagca ttgagaagat aaagaagatt gccatacgct tgtttttaaa
     9661 cagcgcgaat gcatcgaggc ccagcagggt tgtccagctc tgattcgctt gctgtttagc
     9721 aaccggaata tgcggcagag tcagggtaaa cagaaccaga atggcggaaa gtgctgcgcc
     9781 aatatacagc tgcatgtggc ttaattcgaa gccagacagg ctcaccaccc acattgccat
     9841 gataaagccg atggtgcccc agatacggat tggcgggaag tcagtaacga tatccatccc
     9901 ggcattttgc aggcgatagt aagagatggt gttgattaac ccaagcgttg gcatataagc
     9961 aaacgagtta atcaatatca caaggaacat cgcctccggt gtcgtgacct gtgccgccat
    10021 gaacagcgtg atagcgccaa tggtgtggca aatggcatat acccatttcg cacttaacca
    10081 tttgtcggcc acaatcccca gcagcgcagg cataaagacc gcggcgatac ccagtgagct
    10141 ataaactgcg ccaatagaag caccgtcaaa cttcagggta acaaacatat aggagccgag
    10201 ggtcgtcagc caacttcccc acagacagaa ctgcagaaaa gagaggattt tcagctgcag
    10261 cttaagattc atgttaattt cctcacatcg tgatgcggat gagtgtttga aaaagcacat
    10321 ttgaccgtgc gagatgatgg gattctatca acttcgcgga ctggtttttt gttacctgtg
    10381 gcaaataatt gcaaacattc ccaatttgca aaacgaaatt gtgatgtgga taacattttt
    10441 gcccctgagc atcgtcaggg gcggttaatg gaattatcgg cggcggtagg atttttgcgc
    10501 ggtattcact ttataaagat aacggcgaga ttccgcagag ggatggcggg tcgtcagcgt
    10561 ctgataaaca tcgcccggcg tcatggtgtt aataatattg gcagcctgaa tcttatcatt
    10621 cgaaaagact cgcagcacgc tgcctgcgcc gccgttatag gcggtgatga cggcataacg
    10681 ccgcgatgtt gggttatcaa ttccgccgag ataaacattg ttcagcatcg ccagatacgc
    10741 ggtgccggta tcaatattgc tggcaggatc aaacaagaaa ctgcggctcg gcgtgccgga
    10801 tttcccctgc gagcggaaca catctttccc ggcagtatgt tgtaccacct gcattaatcc
    10861 cagcgcatcg gaacggctga ccgcatacgg gttaaaggaa gattcggtct gcataattgc
    10921 cagaatcagc gactcatcaa cgccatattt ccgtgacgcc tggcggacca tgccgagata
    10981 tttgtgcgca cgtttatcaa ggtggttcgg taccatgtta atggtgacgc tgtagatgat
    11041 acgcagcccg ttattgcggc tttgcagacg gtttttcagc agataatccg cgaagttgct
    11101 tgcgcgacct tcccagcgaa tcggctgccc ggtgttgtcc accacctgac cgtaaaggaa
    11161 aggttctttc gaaatcgtaa tatcatcaac gtcggaatag agatcgaccg aactcggatc
    11221 gtcacccatc agcaacgttt tgataattgc ccggcgcaaa tgcgcggcag gttctgtccc
    11281 ggcgatagtt tcgatagtaa tcgtaccgtc atcgaagttg atgtggctgc gggtctgata
    11341 ttgatcggtg tatttcacgt agtccttagg accggcgatc accacctctt tgaatcccca
    11401 gatgttctca atattgtggg caaattgccc catcagaata tcaaaaccgt tggtatcttt
    11461 gacccaggct tcgttatagg tatcgccttt tttggtcgtc gaacaggaga tgagcaacgg
    11521 cgcaatcaaa gccagcgcga gatatttttt catcattccg ggtgcgtgtt gtgtttgttt
    11581 ttatgcaagt tgccggaggc gtgctccggc actgttttta ttttttatct tccggcgtat
    11641 agccctcgat atgcacctct ttaccctcga acaggaagtt gaccatctcc tgctccagca
    11701 gcttgcggtg ctcggcattc atcatgttga gtttcttttc attaatcagc atggtttgtt
    11761 tgtgctgcca ctgcgcccag gcttctttgg agatctcgtt atagatgcgt tttcccagct
    11821 cgccggggta cagctgaaaa tcctgacctt ctgcttcacg ttgcaggaaa gtacaaaaaa
    11881 tcgttctgct cataaatcat cctctttatc gactcacgcg ctaaaccggc gcgccagtgc
    11941 gtaactgctg taacaaacgc tccacgggag ccgccaggcc aactgacggc ggttgcgcta
    12001 agttatacca gagcgcattg ccttcatcca tgcagccggt gaatgacgac acgggaagcc
    12061 acataggcac aatatctaag tggaaatggc tgaaagtatg gcgaaacgcg gtcagctgcg
    12121 tcaggttatc ggcagcaatc tgccgttgcg ccagccaatg ccgcaaactt tcttcgtcgg
    12181 caaactgcgg gaaacagtat aaaccgcccc acaatccgct cggcggacgc tgcgccagca
    12241 atacttcatc ttcgtgctgt aatagcaaaa agtagccggt gcgctccggc agcgtctgtt
    12301 tcggtttttt gcccggataa agcgaccagc tattgttggc ggcggcaata catccgtttt
    12361 gtagcggaca gagcgaacat ttcggtttcg agcgcgtaca aatcatcgcg cccaaatcca
    12421 tcatcgcctg attaaaccgt tccacgccga ccgcgggcgt cacctgctcg cttaaactcc
    12481 ataatttatt ctcgacctct tttttcccag gccagccgct tacagcatag cagcgcgcca
    12541 gcacgcgttt gacgttaccg tcgagaatcg gaaagtgctt acccagagaa agcgagagaa
    12601 tcgcgcctgc ggtggaacgc ccgacgcccg gcagtgctgc aacttcctca aaggtttccg
    12661 ggaatttacc gccgtgtaag gtcgccactt gttgtgccgc tttatgcaga ttgcgcgcgc
    12721 gggcgtaata gccaagcccg gtccacaagt ggagaacttc gtcgagcggc gcattggcga
    12781 gatcggtcac cgtcgggaag cgcgccataa agcgttcaaa ataggggata acggtcgcaa
    12841 cctgagtttg ttgcaacatc acttctgaga gccatacttt gtagggcgtc ttgtcaattt
    12901 gccagggcag agtttttcgc ccgtatttat cgtaccagtc cagaacctgg gctgaaaatt
    12961 gcgacgcttg catggtcacc gaattcactg ttgttggggg caagattgca gcacagcgac
    13021 ggcagggtgt aaaccggaac tttccgcagc cacggcctta tcatgcttgc atccggcaac
    13081 taactttgga taatgcccgt tttcagaaca ctttcacaag cgactaaatc tttatgaaaa
    13141 acgacgtcat ttcaccggaa tttgatgaaa acggccgccc actgcgccgt atccgtagtt
    13201 ttgtgcgccg ccaggggcga ctgaccaaag gccaggaaca tgcgctggaa aactactggc
    13261 cggtgatggg cgttgagttc agcgaagata tgctggattt ccccgcgctt tttggccgtg
    13321 aagcgccggt gacgcttgag attggttttg gcatgggggc gtcgctggtg gcaatggcta
    13381 aagatcgccc cgagcaggac ttcctcggca ttgaagtgca ttcaccgggc gttggtgcgt
    13441 gcctggcttc tgcgcatgaa gagggcttaa gcaacctgcg cgtgatgtgt cacgatgcgg
    13501 ttgaagtgct gcataaaatg attcctgaca attcattgcg catggtgcag ctctttttcc
    13561 ctgacccgtg gcacaaagcg cgccataata aacgccgtat cgttcaggtg ccgtttgccg
    13621 aactggtaaa aagcaaactg cagctggggg gcgtattcca tatggcgacc gactgggaac
    13681 cttatgcgga acatatgctt gaagtgatgt cttctattga cggttataaa aacctgtcag
    13741 agagcaatga ttacgtaccg cgtccggcat cacgtccagt gacgaaattt gaacaacgtg
    13801 gtcatcgtct tggtcacgga gtatgggact taatgttcga gagggtgaaa taatggcaaa
    13861 gaaccgtagc cgtcgtctgc gtaaaaaaat gcacatcgac gaattccagg aattaggatt
    13921 ttcggtggca tggcgattcc cggaaggtac atcggaagaa cagattgata aaaccgttga
    13981 tgattttatt aacgaggtta tcgaaccgaa caaactggcc tttgacggca gcggttatct
    14041 ggcctgggaa ggtctgatct gcatgcagga aatcggcaaa tgcaccgaag aacatcaggc
    14101 aattgtgcgt aagtggctgg aagagcgcaa actggatgag gtacgcacca gcgaactttt
    14161 cgacgtttgg tgggactaag aaagcatacg ggcgatgaca aatgcaaaac tgcctgatgc
    14221 gctacgctta tcatgcctgg aaagatgcac gatcgagtag gcgggataag gcgtttacgc
    14281 cgcatccggc atggaaaacg cgtactttgt tatcaatctg gggccagcaa atgctggcct
    14341 gatttgttct tgagggaaga ctatgatgcg caaaatgctg ctggcggcag cactttcagt
    14401 gacggcaatg accgctcacg ccgactacca gtgcagcgtc acgccgcgtg acgatgtgat
    14461 tgtcagcccg caaaccgtgc aggtgaaggg cgaaaacggc aatctggtga tcacgccaga
    14521 cggcaacgtg atgtataacg gtaagcaata ttccctgaat gccgcccagc gcgagcaggc
    14581 gaaggattat caggctgaac tacgtagcac gctgccgtgg attgatgaag gcgcgaaaag
    14641 ccgcgtcgag aaagcccgta ttgctctgga taaaattatc gttcaggaga tgggcgaaag
    14701 cagcaaaatg cgcagccgtc tgaccaaact tgatgcgcag ctgaaagagc agatgaaccg
    14761 cattatcgaa acgcgcagcg atggcctgac gtttcactat aaagccattg atcaggttcg
    14821 cgccgaaggc cagcaattag tgaatcaggc aatgggcgga attttacagg acagcattaa
    14881 tgaaatgggc gcgaaagcgg tgctgaaaag cggcggtaac ccattacaga atgtgctggg
    14941 aagcctgggg gggctgcaat cctcaatcca aaccgagtgg aaaaagcagg aaaaagattt
    15001 ccagcagttt ggcaaagatg tttgtagccg tgttgtgact ctggaagata gccgcaaagc
    15061 cctggtcggg aatttaaaat aattctctat tttaagacgg cataatactt ttttatgccg
    15121 tttaattctt cgttttgtta cctgcctcta actttgtaga tctccaaaat atattcacgt
    15181 tgtaaattgt ttaacgtcaa atttcccata caaagctaag ggataatgcg tagcgttcac
    15241 gtaactggag gaatgaaatg gagtttttca aaaagacggc acttgccgca ctggttatgg
    15301 gttttagtgg tgcagcattg gcattaccca atatcaccat tttagcaacc ggcgggacca
    15361 ttgccggtgg tggtgactcc gcaaccaaat ctaactacac agcgggtaaa gttggcgtag
    15421 aaaatctggt taatgcggtg ccgcaactga aggacattgc gaacgttaaa ggcgagcagg
    15481 tagtgaatat cggctcccag gacatgaacg ataatgtctg gctgacactg gcgaaaaaaa
    15541 ttaacaccga ctgcgataag accgacggct tcgtcattac ccacggtacc gacacgatgg
    15601 aagaaactgc ttacttcctc gacctgacgg tgaaatgcga caaaccggtg gtgatggtcg
    15661 gcgcaatgcg tccgtccacg tctatgagcg cagacggtcc attcaacctg tataacgcgg
    15721 tagtgaccgc agctgataaa gcctccgcca accgtggcgt gctggtagtg atgaatgaca
    15781 ccgtgcttga tggccgtgac gtcaccaaaa ccaacaccac cgacgtagcg accttcaagt
    15841 ctgttaacta cggtcctctg ggttacattc acaacggtaa gattgactac cagcgtaccc
    15901 cggcacgtaa gcataccagc gacacgccat tcgatgtctc taagctgaat gaactgccga
    15961 aagtcggcat tgtttataac tacgctaacg catccgatct tccggctaaa gcactggtag
    16021 atgcgggcta tgatggcatc gttagcgctg gtgtgggtaa cggcaacctg tataaatctg
    16081 tgttcgacac gctggcgacc gccgcgaaaa acggtactgc agtcgtgcgt tcttcccgcg
    16141 taccgacggg cgctaccact caggatgccg aagtggatga tgcgaaatac ggcttcgtcg
    16201 cctctggcac gctgaacccg caaaaagcgc gcgttctgct gcaactggct ctgacgcaaa
    16261 ccaaagatcc gcagcagatc cagcagatct tcaatcagta ctaatcacct cgccccggta
    16321 tcgtgccggg gctttttcac ttcagactta cgtccattgc caattttcat taccctaatg
    16381 ataatcaccg gaataaatta ttccgcgtga ggtttttcgg gtgaaaaagc aatggattgt
    16441 tggcacggca ctgcttatgt tgatgactgg taatgcctgg gcagatggcg aaccgccaac
    16501 tgaaaatatc ttaaaagatc aattcaaaaa gcagtatcac ggcattctca agcttgatgc
    16561 tatcacctta aaaaatcttg atgctaaggg taatcaggcc acctggtcag cggaaggcga
    16621 tgtctcttcc agtgacgatc tctatacctg ggtcggtcag ttggcagatt acgaactgct
    16681 cgaacagacc tggacgaaag ataaaccggt aaaattctcg gcgatgttaa ccagtaaagg
    16741 aacgcccgcg tctggctggt cggtgaactt ttactctttt caggcggcag ccagcgatcg
    16801 tgggcgggtg gtcgacgata tcaaaacgaa taataaatat ctgatcgtga atagcgaaga
    16861 tttcaattat cgctttagtc agcttgaatc tgcgttgaat acccagaaga actcgattcc
    16921 tgcgctggaa aaggaagtga aagcgcttga taagcaaatg gtggcggcgc agaaagcagc
    16981 ggatgcatat tggggaaaag atgcaaacgg taagcaaatg acccgcgaag aagcctttaa
    17041 aaaaattcac caacagcgtg atgagtttaa taaacagaac gatagcgagg cgttcgcggt
    17101 taaatatgac aaagaggttt atcaaccggc gattgcggca tgtcataaac agagtgaaga
    17161 gtgttatgaa gtgccgattc agcagaaacg agatttcgat atcaacgaac aacggcgaca
    17221 gacttttctg caatcacaaa aactcagccg taaattgcag gatgactggg taacgctcga
    17281 aaaagggcaa tatccgttaa cgatgaaagt ttcagaaata aacagtaaaa aagtcgcgat
    17341 tttgatgaaa attgacgata tcaaccaagc taatgaacgc tggaaaaaag ataccgaaca
    17401 actgcggcgc aatggggtga ttaagtaagt ttgatatagt gcacgatttg tagcaggatg
    17461 cggcgttgac cccgcatccg gcaatcaacg tctgatgcga cgcttgcgcg tcttatcaga
    17521 cctacaaccg ttgccacatg taggctggat aaggcgttca cgccgcatcc ggcaatacaa
    17581 gtttactcag ccagaaaaag ctccagcagc gaatttaaaa acagcttccc atgttccgtt
    17641 atctgccagt aatccgcaca ttctgtgaga taaccctggg caatcgcctc gtctaactgt
    17701 gggcgaatca catcttcgca aagcccggta tacgcaataa actccacgcg cggcgcggcc
    17761 tccagcagac ggaagcgatt cataaagaac tcaaacggct tatctgcggc ttcgacatca
    17821 cgctggcttt ccagatacct tccttgcata aaaccacgcg gatgacgcgt tttggtggta
    17881 cgcagaatgc gcccatccgg gaaggtcact ttcccgtgcg cgccgcagcc aataccgatg
    17941 tagtcgccaa agcgccagta gttgagattg tgctggcact gataaccggg tttggcgtaa
    18001 gcggaagttt catattgctg ataacccgct gcggttaata actgatgccc ctgttcgaaa
    18061 atatcccaca acgcatcgtc gtccggcagc accggtggtc gcgaaccaaa cagcgtattg
    18121 ggttcgatgg tcagttgata ccaggaaaga tgcggcggat tcagttcaat ggcctggcgt
    18181 agatcgccaa gcgcctcttc cagtgattga tccggtagtc catgcatcaa atcaaggtta
    18241 aagctacgta accctaaacc gctcgccagc tttgccgctc gtttcgcttc ttgcgggcca
    18301 tgaatacgcc caagtcgttt cagcttttct tcgctaaaac tctgcacacc aatagagatg
    18361 cggttcacac cagcacgctg ataatcgaca aagcgatccg cttctaccgt gcctgggttc
    18421 gcttccatag taatttctgc atccgctgcc agcggcaaac gcgcacgcac gccgtccagc
    18481 agcgtttgca tcgccgggcc ggaaagcagg ctcggcgtac caccgccaat aaagattgtc
    18541 tttacttcac ggccctgagc gtaagccaca tcgttgtcca ggtcgttaag cagatgctga
    18601 acataatcgt cgtgcggcac ttctcctttc aacgcgtgag agttgaaatc gcagtacggg
    18661 catttctgca cgcaccacgg gatgtgaatg tagagactta gcggcggtaa tttaaccatt
    18721 acgtaaagcg tccagcagca gtttcaatgc ctgaccacgg tgggaaatgg cgctcttttc
    18781 ttcgcgggtc agttcggcag cggttttccc ttcggaaggt acgaagaaga ttggatcata
    18841 accaaagccg ccagtgcccg ctggttcacg agtaatcacg cccggccagc taccgtggca
    18901 caccagcgga gtcggatctt ccgcgtgacg cagatatacc agcacgcagt ggaaacgcgc
    18961 ctgacgttgg tcgtccggta cgtctttcag tgtttccaac agtttttgca gattcttttg
    19021 atcggtcgcg tcttcaccgg aataacgcgc ggagtaaatg cccggcgcgc cgccaagcac
    19081 atctaccgcc agaccagagt cgtcggcaat tgccggtaaa ccggtcactt ttgccgcatg
    19141 gcgcgctttc agaatcgcgt tttcgataaa ggtcaggccg gtttcttcag cggaatctac
    19201 gccgaggtct gtttgggcca cgatatcaag accgaagtcg ctaagcagcg acgccagctc
    19261 acgcacttta ccggcattgc cggttgcgag gacaactttt tgcataggat acctaattaa
    19321 ttaacgccgc gatttctggc gggatttgtt gcggattaat gattttaatt tgtttgtggc
    19381 ggccaagttc gcctttttca atcaccacct ggcttttggc aacccggaat tgcttaccga
    19441 gaaacttcac cagatgactg ttggcctggc cgtcaaccgg cggcgcggta atggcgactt
    19501 taacttcgtc gccatgtaaa ccgacaatag aatcacggct ggctttcggc tgaatataga
    19561 gccgtaaaac cagaccgtca tcattaactg ttacggcact cataacgcca tccacagccc
    19621 cggcagcagc atgtttccgg ttgcctgtaa tacttctgcg acacccatat tgatgacata
    19681 cagcagcaga acgaggatca tcggcgagaa atcaatccca cccattgccg gtagcaggcg
    19741 gcgaatcggg cgcagcagcg gatcggccag ctgaatcagc acgtattcaa tcggactacg
    19801 accctggctt acccagctca taatcgccat caccagcagg acccagaaaa tcagcaggcc
    19861 gatggttttc agcagaatca gtaaaccggc aatccagatg attggcagga aggtcaccac
    19921 tttaaacagc acgatggctt tgataaaact gagaatgtac gcaaccagca gcgaggcgct
    19981 atcaatggga cccattgccg gaataacgcg gcgcagtggc ccgataattg gctgtgttac
    20041 cttcactaca aactgtgaga aggggttgta aaaatcacaa tgagcccact gcatccagat
    20101 gcgtaataac agcaccatgg tatacagctc aatgaccgtt gaaagcagga aagtcaacgt
    20161 attcatggcg ttcctttaat tccttatttt ttagagtaat cacgcgcacc aaaaattgca
    20221 gtgccgatac gaaccatcgt gctacctgcc gcaatggcgg cttccatatc gtccgacatt
    20281 cccagagaga gcgtgtcgat atgcgggtag cgcgttttca gtccggcaaa tgctacagcc
    20341 atttggcgtg caacttcaaa ctgccttaca tattctgact caggcgcagg gattgccatc
    20401 agcccgcgca gacgtaaacg cggtagttca gcgaccgccg ctgccagctc gtccagttct
    20461 gccagttgaa tcccggactt actgttttca tcactaatat taatttgaat cagtacgtta
    20521 agagggggaa gttctgccgg gcgctgatcg ttgaggcggg tagcaatgcg caaacggtcg
    20581 atggtatgac accagtcgaa atgctctgcc accaggcggc ttttattaga ctgcaacggg
    20641 ccaataaaat gccattctaa tcctgttacg cccagttcct gaaagtggcg aattttatct
    20701 accccttcct gaacgtagtt ttcaccaaat tgacgctgcc cggcatcaat ggcttctgcg
    20761 atggcgctcg caggttttgt tttactgact gcaagcagcg taatttcttc tggagaacgg
    20821 ccgcaacgcg ttgcagccgc tgagattttg tcccggacct gtgccaggtt atgcgcaata
    20881 tcgttcattt tccgaggatc ttagtatgaa tatggaagaa attgtggccc ttagtgtaaa
    20941 gcataacgtc tcggatctac acctgtgcag cgcctggccc gcacgatggc gcattcgcgg
    21001 gctaatggaa gctgcgccgt ttgatgcgcc ggacgtcgaa gagctactgc gggagtggct
    21061 ggatgacgat cagcgggcaa tattgctgga aaatggccag ctggattttg ccgtgtcgct
    21121 ggcggaaaac cagcggttgc gtggcagtgc gttcgcgcaa cggcaaggta tttctctggc
    21181 attacggttg ttaccttcgc actgtccaca gctcgaacag cttggcgcac caacggtatt
    21241 gccggaatta ctcaagagcg agaatggcct gattctggtg acgggggcga cggggagcgg
    21301 caaatctacc acgctggcgg cgatggttgg ctatctcaat caacatgccg atgcgcatat
    21361 tctgacgctg gaagatcctg ttgaatatat ctatgccagc cagcgatgtt tgatccagca
    21421 gcgggaaatt ggtttgcact gtatgacgtt cgcatcggga ttgcgggccg cattgcggga
    21481 agatcctgat gtgattttgc tcggagagct gcgtgacagc gagacaatcc gtctggcact
    21541 gacggcggca gaaaccgggc atttggtgct ggcaacatta catacgcgtg gtgccgcgca
    21601 ggcagttgag cgactggtgg attcatttcc ggcgcaggaa aaagatcccg tacgtaatca
    21661 actggcaggt agtttacggg ccgtgttgtc acaaaagctg gaagtggata aacaggaagg
    21721 acgcgtggcg ctgtttgaat tattgattaa cactcccgcg gtggggaatt tgattcgcga
    21781 agggaaaacc caccagttac cgcatgttat tcaaaccggg cagcaggtgg ggatgttaac
    21841 gtttcagcag agttatcagc agcgggtggg ggaagggcgt ttgtgacgtt gccatgcccg
    21901 atgcgcaagt ttatagggcc tataaaggca ataaatgtct gatgcgacgc taacgcgtct
    21961 tatcagacct acagccgctg ccagatgtgt gctggataag gcgttcacgc cgcatccggc
    22021 aagatggcgg taacgactat ccgccaggct tttagatcgc cttaatatcc ctgctcgaaa
    22081 tagctttcga gaataataac cgcagaggca gagtcgactt tgcctttgtt gagcgcccga
    22141 tagccgccct gttcaaacag accggaacgg gcttccacgg tgctaagacg ttcgtcatgg
    22201 agctttactt caacaccgaa acgaccatga atacggttgg caaatttacg cgctctggca
    22261 gtcaatggtt gctcggtgcc gtccatattc agcggcaaac cgacgatgat ttcgtccggc
    22321 tgccactctt tcagtaaacg ttcgatgagg ttccagtccg gcgtaccgtc ctgtgcttta
    22381 attgcaggca aagggcgagc agtgccggta atgcgttggc cgaccgctac gccaatgctt
    22441 ttggtgccga agtcgaaggc gagtaaggtt ccactcatca ggcgtgccct gccacaccag
    22501 gcatggtgag aatatccaca ccaatcagtt ttgccgcctc gcgccagcgg tcggcaatcg
    22561 gcgttttgaa cagaatattc agatccgccg gggccgttag ccacgcgtta tcgagaattt
    22621 cttgttccag ttgacctttt tcccaggagg cataacccag agccaccaat acgtcagacg
    22681 gttgtttatc ggtgccgagc gtttccagca catcgcggga agtggtcatc actgtgttgt
    22741 ctgaaatgcg aatgctggaa gcaaaattgg agggcggagt atgcaaaata aacccgcgat
    22801 cttcagccag cggaccgccg agcataaccg gtttatccag acggattgat tcatcacgcg
    22861 gctccggcgt gatcttcagc ttttccagaa tcccttcaat tttgagattt tccagcggct
    22921 tgttgacgat gatccccatt gcaccattgg tattatgttc gcaaatgtag accacggaac
    22981 gacggaaaat cggatcctgg agagcaggca tggcaataag aaagtgatgc tgtaaattca
    23041 ttgtcagagg ttctgtttcc tggttcaaaa aagcaacagc gcccagtatg cgtggaaaga
    23101 agggcgctgt cactcagagt ctcaacgaga tccttctcgc taaggtgggt tactgctgct
    23161 gtaaacgtgc ttcgatggca tccattaaca ttccggtgat cgacaccgga aactctgctt
    23221 caatctcacg aatacaggtt gggctggtga cgttaatttc agtcagacgg tcgccgatga
    23281 tatccagacc aacaaaaatc agcccttttt ctttcagcgt cggcccgatc tgacgggcga
    23341 ttttccagtc actttccgtc agcggacgag gttcaccgcg accaccggca gccagattgc
    23401 cacgggtttc gcccccctgc ggaatacgcg ccaggcagta cggtaccggc tcgccatcca
    23461 ccaccagcac gcgtttgtcg ccatctttaa tggctggcag gtaattttgc gccatgcagt
    23521 agcgagtgcc atgctcagtc agggtttcgg caatcacgcc gaggtttgga tcgccttctt
    23581 tcacgcggaa aatcgacgcg ccgcccatac cgtccagcgg cttaagaatg atgtcgctgt
    23641 gtttctccca gaacgctttt agctgcgctt tattgcgcgt aaccagcgtt tctggcgtta
    23701 agtcagagaa ccaggcggta aacagtttct cgttacagtc gcgcaggctc tgcggcttgt
    23761 taacgatcag cgtccctttc tcttcggcac gttccagaat ataggtcgcg tagataaact
    23821 cggtatcaaa cggcgggtct ttacgcatca ggatcacatc gagatcggcc agcggcagat
    23881 cctgttcacc gacgaacgaa aaccactctt cgtagttctg cttcacgttc agcgtgcggg
    23941 tatgggcgcg ggcttcgcca ttgatcagat acagatcgcc catctccata tagtgaagtt
    24001 cgtaaccacg acgctgtgct tccagcaaca tagcgaaact ggaatctttc ttgatgttga
    24061 tgtttgcgat ggggtccatc acgatgccga gcttgatcat tattcttctc cgttagccca
    24121 aatcgccaaa tcgtacttgt agcgcggtaa tggcggtgag cgcagttgtc tctgtacgca
    24181 aaacgcgagg tcccaacagg atatcagtaa attgatagcg ggcagtcatg gcaatttcat
    24241 ctgccgataa accgccttcc gggccaatca gcaggcggac gcgttcaacc ggtaacggca
    24301 acgtattgat gctgttactg gcgcgcgggt gaagattcag tttcagtcct tcatcctgct
    24361 ctgcacacca ggcttccaga tccatcgctg ggcggatttc cggcacccgg ttacgaccac
    24421 actgctcaca ggcagcaatt gcaatcttct gccactgctg gagcttcttg ttcagacgtt
    24481 cactatccag tttaacgccg cagcgctcag aaaaaagtgg cgtaatgagg cttacaccga
    24541 gttcgatcga tttctggatc gtaaattcca ttttttcacc acgcgacatc acctgaccga
    24601 ggtgaatatg cagcggagat tcgcgatcgt cgatcttgcc ttccagcacc ttcacttcca
    24661 cgcttttttt gctggcgctg gtaatttcgg cgtcaaagac ctggttgcta ccgtcaaaca
    24721 attgcaacgc ctgccccggc cccatgcgca gtacgcgccc gatatggttg gcggcatctt
    24781 cgcaaagcgc gatgtgagaa tggctggtca gtggttcagg atgataaatg cgggggatac
    24841 gcatagttaa aaatccgcgt cgtctcccca cgcggttgta cgcgtggggt aggggttaac
    24901 aaaaagaatc ccgctagtgt aggttagctc tttcgcgcct ggcaagcgcg ttgcacatac
    24961 gggttatgat tgccttgcac cttcgcgatg cgttcatcgc gctcgcactc ccagtcggta
    25021 accggataca tcttgttcca tgcgttgaac agctgcgttt gctggcgaga gagtgtcagg
    25081 ttgtattggt cgcgcatata gaagtaggtg cgcgcaatgg caccgcgtgc acgcgctggt
    25141 ggttcggcag ctttttcttt gaaatcgacc ttcatggcgc attgaccgta ctggccttcg
    25201 ccgccattcc actggctgta cataaagttg ccgcgatcgc cattcacctc accgactgac
    25261 ggctgcaggt tatgcatatc gctttccatc ttgcgataga ccggatcttt agcgcagttt
    25321 ttacgtccac cgtcctgcca gcactggcgc tggtgaccga actgccaggc gggaacgacg
    25381 tgttcccact ctacgcggct ggcgcggttt tcatttttgc gcacctgata gccgcacgat
    25441 tgcagatcaa caacgccttt tttgccctgc cagttaattt tacatccgca ataaaacgta
    25501 ccgggcgcgt cagcgtggac ttttaccgcc gcggctttcg cctgagaaaa actattgata
    25561 ccttcggcca acgccgggcc ggaaaatgct gcgctcagta ccactgcagc aatagacaaa
    25621 taacggtaca tcacttactc cgtgttaaaa cgagccagca acgtagcgaa agttgttttg
    25681 gtatgcaatc agccagatca ggaaagttcc tgatagttca gatggttatt tcgcaaccag
    25741 ctgttcaccg cagtgaacac agcgatagac ggcctcgcca cgaactacgc gattatggcg
    25801 gcgtacggta agctgatgct cctggcactt gcagcggtag gggaaggtgt tgcgacgcac
    25861 ggattgcagt tcgaactgat gcgtacgacg ggcgggaacg cccagcacgc tttccatcat
    25921 ccacttccac tctttgccat gtggtgctac gcggccgaaa tgtttccata ccagcaaatg
    25981 tgccagttcg tgcggcacca cttcttcaat aaaggcttca ctgttttcca acagcaaaac
    26041 gggattgagg cgaatttcat agctttccag ccaggccgtt ccggcggagg ttccgcgctg
    26101 ggtgtaagag agttttggct ccgggtagtt acgccctagc ttcaggttgg cctgggcgag
    26161 tttttcccgc aggcgacgca taacggcctg ttggatggcg atagggagac gggatgtttt
    26221 catagcggca gaggatagag cgaagaaaag atgactgcaa gaggtggctt cctccgtgac
    26281 aggaggaagc ctgaggagat taatcgtgag cgccgatttc gcgcagttta cgacctttca
    26341 tcagattacg ttcaatatgt tccagcgaaa cgtgtttggt ttccggtacc agccacaatg
    26401 tcagcaggat aaacagtacg ttcagagccg catacaccca gaaggtgttg gcgttaccca
    26461 gcgtgttgag catggtcagg aacgttgcgc caacgatcat gttggcaatc cagttggtgg
    26521 cggtggagca ggtgatgcca aaatcgcggc ctttcagcgg ctgaatttcg gagcacagta
    26581 cccaaatcag cggaccggca ctcatggcaa aaccgacaat aaacatcagc agcatggcga
    26641 tggcgaaata ctgcgctgac ggagagtgaa taccgatatg catcattgta ccgagtacgc
    26701 ccatgccagc agccatcacc aggaagccca gcgttagcgt tggtttacgt ccccagcggt
    26761 caacaaggcc gattgcgatg aaggtggcaa gtacgttggt caggccgaca atcactgtcc
    26821 cccacatttg ctctgtggtg ttggtataac ccgccagttc gaagattttc ggcgcgtaat
    26881 acatgatgac gttcatcccg gtgaattgct gcattacctg taacagtacg ccaaggaaca
    26941 ccgcgcggcg gaagttgctg ttctctttaa acagcgccca gccactctgt ttaacctgca
    27001 aactttcacg gatttcatcc agttcgcgtt tcgcttccgc gctggtgtca cgcaggcgta
    27061 gcagcactcg ttcggcatca acaaaacggc gtttggcggc aaaccaacgt gggctgtctg
    27121 gcaggaagaa gacaccaatc agcagcaaaa ttgccgggat gataatcaca cccagcatcc
    27181 agcgccatgc accggtgtag ctgaaggcgg tatcagaaag ataagcaccg aggatcccga
    27241 tagtgatcat caactgatac atcgagatca tactgccgcg aattttttcc ggcgcaattt
    27301 cagagaggta cagcggtgcg gtataagagg ctacacccac cgccagcccc agcagaacgc
    27361 gggaaagaat cagtacttca acgtttggcg cagccgcaga gaacagtgaa ccggcaacaa
    27421 acaggattgc gccgatcatc aggctctttt tgcgcccgag tttaaaggag agccagccgc
    27481 tgcccaccgc accgactgcc gcaccgaaca tcatggagct tacgacccat tcttgcgtat
    27541 gcgaagtaat ctggaattca tctgcaataa acggcagtgc gccagcaatt acaccgatat
    27601 ccaggccaaa gagtaatccc gccagagcgg caaggaagca gacgaaaaac gtcattgcct
    27661 tgtttgaccg cccctgtttt ttagcgtcag gcatgatgcc ctccaatatg gttatttttt
    27721 attgtgaatt aagataggtg agtacgacgt aaaaagatgt gaagcaaatc acatcagtgt
    27781 aatcgcttac actaacattt atct
//
LOCUS       DAPGWB010000054        27793 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.054, whole genome shotgun sequence.
ACCESSION   DAPGWB010000054 DAPGWB010000000
VERSION     DAPGWB010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 27793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27793
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.054"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            72..734
                     /gene="acrS"
                     /locus_tag="RHX79_002183"
     CDS             72..734
                     /gene="acrS"
                     /locus_tag="RHX79_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrS"
                     /protein_id="HDV2197348.1"
                     /translation="MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVT
                     RGAIYWHFENKTQLFNEMWLQQPSLRELIQDHLTAGLEHDPFQQLREKLIVGLQYIAK
                     IPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLD
                     VVMIIINGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELS
                     VM"
     gene            complement(737..916)
                     /locus_tag="RHX79_002184"
     CDS             complement(737..916)
                     /locus_tag="RHX79_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2556 family protein"
                     /protein_id="HDV2197349.1"
                     /translation="MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNP
                     LKLVNCDELNFQDRM"
     gene            complement(1000..1884)
                     /gene="yhdJ"
                     /locus_tag="RHX79_002185"
     CDS             complement(1000..1884)
                     /gene="yhdJ"
                     /locus_tag="RHX79_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HDV2197350.1"
                     /translation="MRTGCEPTRFGNEAKTIIHGDALAELKKIPAESVDLIFADPPYN
                     IGKNFDGLIEDWKEDLFIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLF
                     TIKSRIVWSYDSSGVQAKKHYGSMYEPILMMVKDAKNYTFNGDAILVEAKTGSQRALI
                     DYRKNPPQPYNHQKVPGNVWDFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDIV
                     LDPFAGSFTTGAVAVSSGRKFIGIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTG
                     NLSKRSRLSEVDPDLIAK"
     gene            complement(1970..2266)
                     /gene="fis"
                     /locus_tag="RHX79_002186"
     CDS             complement(1970..2266)
                     /gene="fis"
                     /locus_tag="RHX79_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HDV2197351.1"
                     /translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG
                     QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN"
     gene            complement(2292..3257)
                     /gene="dusB"
                     /locus_tag="RHX79_002187"
     CDS             complement(2292..3257)
                     /gene="dusB"
                     /locus_tag="RHX79_002187"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HDV2197352.1"
                     /translation="MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSS
                     NPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPA
                     KKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAED
                     CGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGA
                     DALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGY
                     RIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA"
     gene            complement(3586..4467)
                     /gene="prmA"
                     /locus_tag="RHX79_002188"
     CDS             complement(3586..4467)
                     /gene="prmA"
                     /locus_tag="RHX79_002188"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDV2197353.1"
                     /translation="MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPL
                     PGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDN
                     FHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK
                     TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQ
                     PEEMKADVVVANILAGPLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFAL
                     DPVVEKEEWCRITGRKN"
     gene            complement(4479..5930)
                     /gene="panF"
                     /locus_tag="RHX79_002189"
     CDS             complement(4479..5930)
                     /gene="panF"
                     /locus_tag="RHX79_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HDV2197354.1"
                     /translation="MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMG
                     GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA
                     RRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYET
                     GLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQ
                     TIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIG
                     TIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS
                     TINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMI
                     IWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFH
                     PIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK"
     gene            complement(5920..6162)
                     /locus_tag="RHX79_002190"
     CDS             complement(5920..6162)
                     /locus_tag="RHX79_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhdT family protein"
                     /protein_id="HDV2197355.1"
                     /translation="MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLPGVAPGFTGFPR
                     WFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA"
     gene            complement(6271..7620)
                     /gene="accC"
                     /locus_tag="RHX79_002191"
     CDS             complement(6271..7620)
                     /gene="accC"
                     /locus_tag="RHX79_002191"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009483995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDV2197356.1"
                     /translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLL
                     ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF
                     IGPKADTIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA
                     SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFNNDMVYMEKYLENPRHVEIQVLADG
                     QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE
                     FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHA
                     VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG
                     ENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK"
     gene            complement(7631..8101)
                     /gene="accB"
                     /locus_tag="RHX79_002192"
                     /gene_synonym="fabE"
     CDS             complement(7631..8101)
                     /gene="accB"
                     /locus_tag="RHX79_002192"
                     /gene_synonym="fabE"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDV2197357.1"
                     /translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVM
                     QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF
                     IEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE"
     gene            complement(9079..10053)
                     /locus_tag="RHX79_002193"
     CDS             complement(9079..10053)
                     /locus_tag="RHX79_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDV2197358.1"
                     /translation="MQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDA
                     LAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQA
                     RVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVG
                     STAVALLHKLGYQVVAVSGRESTHEYLKSLGASRILPRDEFAESRPLEKQVWAGAIDT
                     VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRA
                     QAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN"
     gene            10205..12145
                     /gene="csrD"
                     /locus_tag="RHX79_002194"
     CDS             10205..12145
                     /gene="csrD"
                     /locus_tag="RHX79_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase E specificity factor CsrD"
                     /protein_id="HDV2197359.1"
                     /translation="MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQA
                     VATAIDTHLVSNDFSTLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSD
                     LFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQR
                     QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT
                     LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS
                     QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT
                     LPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK
                     GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM
                     VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKS
                     QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL
                     KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG
                     DFFASSQPLDTNVKKYSQRYSV"
     gene            12450..13493
                     /gene="mreB"
                     /locus_tag="RHX79_002195"
     CDS             12450..13493
                     /gene="mreB"
                     /locus_tag="RHX79_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreB"
                     /protein_id="HDV2197360.1"
                     /translation="MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQD
                     RAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNS
                     FMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATG
                     SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERI
                     KHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALE
                     QCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALE
                     MIDMHGGDLFSEE"
     gene            13559..14662
                     /gene="mreC"
                     /locus_tag="RHX79_002196"
     CDS             13559..14662
                     /gene="mreC"
                     /locus_tag="RHX79_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDV2197361.1"
                     /translation="MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDT
                     AVSPFYFVSNAPRELLDGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENA
                     RLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ
                     VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD
                     VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG
                     ANPMTPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPATGIAQPTPQQPTTGNAATA
                     PAAPTQPAANRSPQRATPPQSGAQPPARAPGGQ"
     gene            14662..15150
                     /gene="mreD"
                     /locus_tag="RHX79_002197"
     CDS             14662..15150
                     /gene="mreD"
                     /locus_tag="RHX79_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HDV2197362.1"
                     /translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILL
                     YWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQ
                     QALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA
                     VQ"
     gene            15159..15752
                     /gene="yhdE"
                     /locus_tag="RHX79_002198"
     CDS             15159..15752
                     /gene="yhdE"
                     /locus_tag="RHX79_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase YhdE"
                     /protein_id="HDV2197363.1"
                     /translation="MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQY
                     VVRLAREKAQAGVAQTAQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQ
                     VMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV
                     RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG"
     gene            15742..17211
                     /gene="rng"
                     /locus_tag="RHX79_002199"
     CDS             15742..17211
                     /gene="rng"
                     /locus_tag="RHX79_002199"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HDV2197364.1"
                     /translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG
                     RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQD
                     LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
                     YCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQR
                     VLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEI
                     QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ
                     LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKR
                     TRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE
                     ALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM"
     gene            17279..21079
                     /gene="yhdP"
                     /locus_tag="RHX79_002200"
     CDS             17279..21079
                     /gene="yhdP"
                     /locus_tag="RHX79_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709041.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA2 domain-containing protein YhdP"
                     /protein_id="HDV2197365.1"
                     /translation="MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKI
                     ESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMR
                     WQFRDLTFWQLRFRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSG
                     QRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQ
                     ADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQT
                     HTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRS
                     DELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTR
                     FQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIAD
                     GQATISWLNNDKGFQLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGS
                     QAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLR
                     NAKFAFQPDWPALTNLDIELDFINDGLWMKTDGVNLGGVRASNLTAVIPDYSKEKLLI
                     DADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEV
                     TLRNNSLFIKPLDSTLKNLSGKFSFINGDLQSEPLTASWFNQPLNVDFSTKEGAKAYQ
                     VAVNLNGNWQPAKTSVLPEAVNEALSGSVAWDGKVGIDLPYHAGATYNVEMNGDLNNV
                     SSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGADNHFNSRWLLGQKLTLDRAIW
                     AADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLS
                     LGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTR
                     GDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDITISGDTLTLTNGLI
                     DTGFSRLTADGEWVNNPENERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLH
                     WRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTF
                     GEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEIS
                     ATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRK
                     EKAQ"
     gene            21235..22680
                     /gene="tldD"
                     /locus_tag="RHX79_002201"
     CDS             21235..22680
                     /gene="tldD"
                     /locus_tag="RHX79_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HDV2197366.1"
                     /translation="MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSY
                     HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRD
                     SGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLS
                     GVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLD
                     GEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRR
                     GTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQ
                     DKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFG
                     GGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNG
                     VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA"
     gene            complement(22808..23737)
                     /gene="aaeR"
                     /locus_tag="RHX79_002202"
     CDS             complement(22808..23737)
                     /gene="aaeR"
                     /locus_tag="RHX79_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AaeR"
                     /protein_id="HDV2197367.1"
                     /translation="MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDEL
                     QVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTM
                     AQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGA
                     MPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRF
                     VTNDPMTLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDK
                     LPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK"
     gene            23920..24123
                     /locus_tag="RHX79_002203"
     CDS             23920..24123
                     /locus_tag="RHX79_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AaeX family protein"
                     /protein_id="HDV2197368.1"
                     /translation="MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFV
                     WHPALFNTALYCCLFYLISRLFV"
     gene            24131..25063
                     /gene="aaeA"
                     /locus_tag="RHX79_002204"
     CDS             24131..25063
                     /gene="aaeA"
                     /locus_tag="RHX79_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeA"
                     /protein_id="HDV2197369.1"
                     /translation="MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFS
                     ADVVAIAPDVSGLITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQVLAQ
                     EKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAP
                     ADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGS
                     NKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRICLDNQQENIWP
                     AGTTATVVVTGKQDRDESQDSFFRKMAHRLREFG"
     gene            25069..27036
                     /gene="aaeB"
                     /locus_tag="RHX79_002205"
     CDS             25069..27036
                     /gene="aaeB"
                     /locus_tag="RHX79_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeB"
                     /protein_id="HDV2197370.1"
                     /translation="MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAA
                     IVAAGPAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIW
                     AGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCA
                     IMADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQ
                     GMRSNLNMESSRWARANRRLKAINTLSLTLITQSCETYLIQNTRPELITDTFREFFDT
                     PVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKRGVISNTKINATE
                     EEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTS
                     LAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIE
                     VQKRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCVLAFTVILLVRDKSR
                     DRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTM
                     IIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEK
                     LRIWQAPPQVTEPVHRLAGMLHKYQHALTDS"
     gene            27128..27400
                     /locus_tag="RHX79_002206"
     CDS             27128..27400
                     /locus_tag="RHX79_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HDV2197371.1"
                     /translation="MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMN
                     DVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEELEGHLRFNVRH"
     gene            complement(27456..27719)
                     /gene="yhcN"
                     /locus_tag="RHX79_002207"
     CDS             complement(27456..27719)
                     /gene="yhcN"
                     /locus_tag="RHX79_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417705.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid stress response protein YhcN"
                     /protein_id="HDV2197372.1"
                     /translation="MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSG
                     VASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK"
BASE COUNT         6667 a         6946 c         7388 g         6792 t
ORIGIN      
        1 ttaggtgata gattaacctt cgctattttc tcactctgtg tcgaatatat ttatttcctg
       61 aataattaat catggcaaaa agaaccaaag ccgaagctct gaagacccgg caagaactga
      121 ttgaaactgc catcgcccag tttgcgcagc atggcgtaag caagacgaca ctcaacgaca
      181 ttgccgacgc tgctaacgtt acgcgtggcg ctatctactg gcacttcgaa aacaagactc
      241 aactgtttaa tgagatgtgg ttgcaacagc cttcattgcg agagttaatc caggatcact
      301 tgacggctgg gttagagcat gacccatttc aacaattgcg tgaaaaattg attgtcggct
      361 tgcaatatat tgccaaaatt ccccgccagc aggcgttgct gaaaatctta tatcacaaat
      421 gtgaatttaa tgatgagatg ctggccgagg gagtgatacg cgaaaagatg ggcttcaatc
      481 cgcagactct ccgcgaagta ttgcaggcgt gtcagcaaca aggttgtgta gcaaataacc
      541 tcgatttaga tgttgtgatg attattatta atggtgcctt cagcggaatt gttcaaaact
      601 ggttaatgaa tatggcgggt tatgatcttt ataaacaagc ccccgctctg gtcgataacg
      661 tattaagaat gttcatgcca gatgaaaaca taacgaaatt aattcatcaa acgaatgaat
      721 taagtgttat gtaaattcac attctgtcct gaaaattcag ttcgtcacag ttaaccagtt
      781 ttagtggatt aactgagttc atattgcggc atttgtctgt ttctgttgtc agcagttcaa
      841 tccactgcat cagtaaagta tcaaacagaa aaacgaagac agcgaaaacg acgagccacc
      901 aatacttgcg aatcattacc tgagcctgtg catgtttaac caagtctggc aggaaatata
      961 cacgaaatga ataatctgaa aaccaggctt acacttcctt tactttgcaa tgagatcggg
     1021 gtcaacttcg cttaaccggc ttcgttttga caggttgccg gtctttcttt ttttcacttt
     1081 cgccagttct tccgcagagt aatgcgacgc gacatccagc cgtcgaagcc ccattttgat
     1141 gtactcgctg ttgatctcaa taccaatgaa ttttcgcccg ctggagacgg ctacggcacc
     1201 ggtagtaaag ctaccggcaa acgggtcgag aacgatatcg cctgggttgg aagaggcgag
     1261 aataatgcgt ttcagtaagg cttccggttt ttgcgtcggg tggttctcat attcatccat
     1321 caaataacgc acgcgcggaa aatcccagac gttacccggt actttttgat gattgtatgg
     1381 ctgtggagga tttttgcgat aatcgatcaa cgcgcgctgc gatccggttt tggcttctac
     1441 cagaatagca tcaccgttga atgtgtagtt ctttgcgtct ttcaccatca tcaggatggg
     1501 ttcgtacatg gagccgtagt gttttttcgc ctgtactcca gaactgtcat atgaccagac
     1561 gatgcgactt ttgatggtaa aaagcttgcg gcactggaga tcgataaagg gcatgttttc
     1621 cgtgctgttc atgatgtaca tgctgccctg ctttttcaga acgcggtggc actctgcaat
     1681 cacttcaaac agccagtcga taaacagatc ttctttccag tcttcgatca gaccatcaaa
     1741 atttttaccg atgttatatg gtgggtcggc aaagatcaga tcgacacttt cggcggggat
     1801 ctttttaagt tcggcaagcg catcaccgtg aataatggtc ttagcttcat taccaaaccg
     1861 ggtcggttca catcctgttc tcatggtcac tccctttgtg acacctataa aaaaggcgct
     1921 tccccatgcc gagtagcgcc tttttaatca agcatttagc taacctgaat tagttcatgc
     1981 cgtatttttt caatttttta cgcagcgtac cacggttgat gcccatcatc agcgcagcac
     2041 gggtctggtt accacgggtg tattgcatca ccatgtccaa caggggctgt tctacttcag
     2101 ccagtaccag ctcatagagg tcattcacat cctgaccatt cagttgagca aaatagttct
     2161 tcagtgcctg tttaaccgag tcacgcaggg gtttttgggt tacctgatcc tgagagttaa
     2221 cggtagaaac ggtcagtacg tcagaattta cgcgttgttc gaacatagtt ctgtcagctc
     2281 tttatttctg tttacgcaaa attttcgaag tatgcctcca acgcctccag ctgttcgctg
     2341 gcatcctcaa tggcgttgaa tgtgcgccga aactggtcat ttggagcgtg ttcctggaga
     2401 taccaggaaa cgtgtttacg tgcaattcgg tacccttttg ccggaccata aaagtcatgc
     2461 agttcccgaa cgtgcgcgca aagcaagcgc ttaacctctg ccaaaggcag cgggggcagc
     2521 aactccccag tgtccagata atgctggatt tcccgaaaga tccagggtct tccctgagct
     2581 gcgcggccta tcatcagggc atccgcccct gtatagtcga gcacagctct ggctttaagc
     2641 gggtcagtaa tgtcgccatt cgcgataacc ggaatggaaa ctttctgctt aactgcccga
     2701 atactgtcgt actcagcttc tccattgaac aaacaggcgc gtgtacggcc atgaatggtc
     2761 agagcctgaa tgccacagtc ttcagccagt tgggcaatct cttcgcagtt acggtgttcc
     2821 ggtgcccagc cggtgcgaat cttcagggta acaggaacgt ccactgcatt gacgacctcg
     2881 gtaaggatcg atttaacgac atccgggtac tgcaagaggg ctgaacctgc gagcttgcga
     2941 ttcacttttt tagccgggca acccatattg atatcaataa tctgggcacc gctttccacg
     3001 ttaatacgtg ctgcatctgc catttctttc ggatcgctac cagcaatttg cacggtgcga
     3061 ataccgggtt catcaatgtg caccatccgt aaacgagatt tgtcgctttc ccaaacctgt
     3121 gggttagaag acatcatctc ggatactgtc aatccggctc ccatctcgta gcacaacgtc
     3181 cgaaaaggtc tgtctgtaat gccagccatg ggcgctgcga tcaggcgatt tctgagctga
     3241 tattgtccga tgcgcatgag ttaagaaatg accatactgt gactgcaagg cggcgtatat
     3301 tacgcatttt ttgcacgaga tgaaaggcca aactttgacc aatcctctga gatggatcaa
     3361 agaattgcat ttaaaatgag cgtggtgcga taattactca taaaaatcat catattagaa
     3421 aatagtgact aaaatttaca ctcaaagaaa tttgagtaag ttctcaattt ttctttatga
     3481 atgaaaattt tggcacgcaa atttgcgtaa ataaccggca aatttacgtg ccttttgtga
     3541 gcttgctcgc acttcgcccc gcgtcaccct acggcgatgc gaaggttaat tcttacgacc
     3601 ggtaatacgg caccactctt ctttttccac gaccgggtcc agtgcgaagc tatcggcata
     3661 agcttcacaa acgctctctg cctggcttgc cagaataccg gaaaggccca gcaaaccgcc
     3721 tgaaaccggc aggacgctga ttaacggtgc cagttcacgt aatgggcctg caaggatgtt
     3781 agcgaccacc acgtcggctt tcatttcttc tggctgatct ttcggtaagt agagttccag
     3841 acggtcagaa acgccattac gttcggcgtt gtcgcggctg gcctgaatcg cctgcggatc
     3901 gatatcaata ccaatggctt ttgctgcacc cagtttcagc gccgcgatcg ccagaatgcc
     3961 ggaaccacag ccaaagtcga tgactgtttt accggttaaa tcgaggctgt cgagccattg
     4021 caggcacaga gaggtggttg gatgggtacc cgtaccaaac gccagccctg gatctaacat
     4081 cacgttgacg gcgttttcgt ccggcacatc acgccagcta gggcagatcc acagtcgttc
     4141 accaaagcgc atcgggtgga aattatccat ccattcgcgc tcccagtctt tatcttctag
     4201 ttgttcgatt ttatgcgcga agcctgcgcc gagcagcgga tggttttcca gaatcgccac
     4261 cacgtcgttc atatcggttt cagcgtcgaa cagaccaatc acatcggtgt cgccccacag
     4321 gcgcgtttcg cccggcagcg gctcaaatac tggcgtatcg tgggtatcct gaaaagtgat
     4381 agaaacggca cccgcttcca tcagcgcatc gctaagatct tccgcgttcg cgccggtggt
     4441 gttcagtttc agttggatcc aaggcatggc aaaactcttt atttatcagt agtcaaaacg
     4501 gtagcttgcg ggacggatgt accgaaacgg tttccgacca ggaaagccag caaacttagt
     4561 agtaacgagg gcacaatagg gtggaagccc aggtactgaa tattcagcgt cgcgagtacg
     4621 gcatacagca cgccgccaac gatcatcgca cttagcgcgc ctttggcgtt ggcgcgttcc
     4681 cagtaaagac ccagcaccag cggccacagg aaaacggctt ccagcccacc gaaggccagc
     4741 aaattcagcc agatgatcat ttctggcggc ttccaggcgg caagcagcag caacgcgccg
     4801 agaactaacg taattaccgc cgacatccgc ttcagacgcg tctcgttttg catttgatcc
     4861 ggacggatat tcagatagag atctttaatg atcgtagcgg aactttgcag cagttgggcg
     4921 ttaattgtcg acatgatcgc agccataggt gcagccagaa agatcccggc agcaaaaggt
     4981 ggcagcactt ttaccattaa cgtcgggatc accagatccg gtacggtgag atcggggatc
     5041 actgcacgac ctaacgctcc ggccaggtgc ataccgaaca tcaggattgc gactacaatt
     5101 gtaccgatga tgatcccccg gtgtactgct ttgctgtctt tataagagat acagcgcacc
     5161 gcagtatgcg gcaggccaat cacgccaaag cacaccagta cccagaacga cgtcataaag
     5221 gcaggcgaca gaatatcgtc agcgccttgt ggcgtaacca gttgcggatc gatggtttgc
     5281 aaggtctgta ctgcgttgct taagccgcca gcggcatgta ccacgccaat aagcagcaca
     5341 acggtgccaa tcagcatcac aagcccttgc atggtgtcgt tcagcacgct ggcgcgaaag
     5401 ccaccaaagg cggtatataa cgcaatgctg ataccaaaaa tcagcagccc ggtttcataa
     5461 ggaatacccg ccgcggtttc cagcaggcgc gcaccgccga taaactgcac ggtcatcgca
     5521 ccaacgaacg caaccagcaa actcaaactc gccagccaca ccagaagacg actctggtag
     5581 cgggcaaaca gcatgtcgtt cagcgtcact gcattgtagc ggcgcgcaag aatcgcaaac
     5641 ttcttgccga gaataccgag tgaaagccag actgcaggaa gctgaatcat cgccagcaat
     5701 acccagccca gcccgtattt ataagcagct cctggcccgc cgataaacga actggcactg
     5761 atataggtcg cggtgagcgt catcgccagc acaataccgc ccatagagcg gctgccgagg
     5821 aaatactcat taaggaaggt gccggtgctc cgtttacgca tcgcataaac cgagataccg
     5881 aacaccacca ccagataggc gaccagcggt agaattactt caagctgcat cgtcatcctc
     5941 cagtgggata tcgcgataga taaatttcac catcgcccag cacagtccaa taaacagtag
     6001 cggcgtcagg atgcaggcca tctcaaacca gcgcggaaag ccggtaaaac cgggggcaac
     6061 gccaggtaag taagcggcta ctaaccaaac tgccagatac aaaagggtca gccccagcgc
     6121 ccagcgcgcc tctttatggg cctgaacaaa acgagtgtcc attttttgtc cctgatgggt
     6181 gaagaaagcg aggattgtac cttatggggg ttgtcgatcc ccagtaataa aaaaggccgg
     6241 aaaatccggc cttttgacgc ttttgcagtc ttatttttcc tgaagaccga gttttttctc
     6301 cagatagtgg atgttagtgc caccatgctg gaagttctcg tcattcatga tgcggatctg
     6361 cagatcaacg ttggttttga taccgtcgat gatcagctcc tgcagcgcat tcttcatgcg
     6421 agcaatcgcc acgtcacggt tttcaccgta gcaaatcagc ttaccgatca ttgagtcata
     6481 gtacggcggt acggtgtagc ccgcgtagat atgagactcc caacgtacgc caaaaccgcc
     6541 aggtgcgtgg aaacgggtga ttttgcctgg gcttggcagg aaggtgttcg gatcttcggc
     6601 gttgatacga cattccaccg catggccgcg aacgtgaact tcttcttgct tgatcgacag
     6661 cggttgaccg gcagcgatac gcagctgttc tttgatcagg tcaacgccgg tgatcatttc
     6721 tgtaaccggg tgttctacct gaatacgggt gttcatttcg atgaaataga actcgccgtt
     6781 ttcgaacagg aactcgaaag tacctgcacc gcgatagccg atatcaacac acgctttagc
     6841 acaacgttcg ccgatgtagc gacgcagttc cggtgtaatt cccggtgctg gtgcttcttc
     6901 gaccactttc tggtgacgac gctgcataga gcagtcacgt tccgccagat agatagcgtt
     6961 gccctgaccg tcagccagta cctgaatctc gacgtggcga ggattttcca ggtatttctc
     7021 catgtaaacc atatcgttat tgaatgcggc tttcgcttcc gcacgggtca tggagatgga
     7081 ttgtgccagt tcagcgtcgc cgcgcactac acgcatacca cgaccgccgc cgccgccgga
     7141 ggctttgata atcaccggat aacctatgcg tttagcaatg gcacggtttt tatccatatc
     7201 gtcgcccagc gggccgtcag aacctggtac gcaaggaacg cccgcttttt tcatcgccgc
     7261 gattgccgac actttgtcac ccatcaggcg aatagtgtct gctttcgggc caatgaagat
     7321 aaagccggag cgttcaacct gctcggcaaa gttggcgttc tcggagagga agccgtaacc
     7381 cggatggatt gctactgcgc cggtgatttc agcggcgctt atgattgccg ggatgttcag
     7441 ataacttttt actgacggag cagggccaat acagaccgtt tcatctgcca gtaatacgtg
     7501 ttttagatcg cgatccgcgc tggagtgcac agcgacagtc ttgatgccca gttctttaca
     7561 ggcacgaaga atacgcaatg caatctcgcc gcggttggca ataacaattt tatccagcat
     7621 gttcgcctcg ttactcgatg acgaccagcg gctcgtcaaa ttctaccggt tgtccacttt
     7681 cgaccagaat tgctttcacg gtaccggatt tgtccgcttc gatctggttc atcattttca
     7741 tggcttcaac gatgcacagg gtatcgccca cgttgacttt ctgacccact tcgatgaacg
     7801 cttttgcgtc cgggcttggg gtgcggtaga aagtaccaac catcggggag cgtacgatgt
     7861 gaccactgat ttccgctgct gctggcgctt ccatggaagg aacggtcgcc ggagcggctg
     7921 cgttagattg agctggctgc tgcatcattg gtgcagcgta agcttgttgc atcacaggga
     7981 aacttgcggc aggagctgca cggctgatgc gtactgactc ttcgccttcg gagatttcca
     8041 gttcggagat gcctgattct tcaaccagct cgatcagttt tttaatctta cgaatatcca
     8101 tgagtgggtt ccgtactctt tgtttagtgt gattgtgaca ggcgtttcac cgccgtctgt
     8161 aaagcgtatg ccccgacagc tgtatgcata gcgataaatt ccagcaggcc gggacgccgg
     8221 tctattttgc cccagagtgt caatgttaga cttgacggac attgtgcagc gatctgctgc
     8281 tatcctccgg caaaaaacaa aatatacctt cgttgcgcca atgtcacctt ttccgcagcg
     8341 caaaaactgt gtcagggagg acgaggtcgc acattataac gatttcgtag caattggcag
     8401 ctaaatactg gtcttatcag ggaagataat caacagctaa catgtaaata accttcaaca
     8461 ccgtgtaatt tgcaacaagc cgcacaattc acgaaattag cgccatcatc gacggaactt
     8521 cttataacgt aaggtgaaaa gctgtaaagc cagccctgcg aagatgaggg gctgcaatga
     8581 gataatcttc acagaccaca aataatgtag ggatgccagg atcgcgacaa gatagacgac
     8641 attacgcagc ggttgctggg gattacccaa ttttcactgc atcgtctgga tagatgtgaa
     8701 tgctaaagca cgcaaaatca accgactgac aattctcagc attaaatagg ttcgagtggt
     8761 taatttgtag tcaaataaaa tcagattatt caccccatgg gaccagaaat cagtaatagg
     8821 ttaagcgtag tgtcgcccag gcaaagcacc ataaacctaa caggcgacgg aggcatatca
     8881 ataatggctg tttagaggag tatcaatgcg catcaatttg tggtcagtcg aaatcatgac
     8941 tttccagttt ggatgatgtt gtacaacttc ctgaccaagg tgttcgacga aagctgtccg
     9001 gctaaccgct tttcccgtta accgattgaa taatgatgtc aaaatgagtt ccctctctta
     9061 ttattccttg ctaaatggtt agttaacctt caccagcgtg cgaccctgga tctggttatt
     9121 aatgatggcc tcggcaaagt tcggtgcctc tgacagagat atctcttttg ccgcctgggt
     9181 atagaatgat tccggtaaat cggcgaccag tcgctgccag gcttgtgcgc ggcgttctgg
     9241 tggcgtcatt actgaatcca ccccttgcaa acggacatta cgcagaataa atggcatgac
     9301 cgtggttggc agagtaaaac cacccgccag accacaggca gccacgcagc cgccgtaatt
     9361 catttgcgcc agcacttttg ccagcacttt gtcgccaaca gtgtcaattg ccccagccca
     9421 gacttgtttt tccagaggac gggattcggc aaactcatca cgagggagaa tacgactggc
     9481 acctaaactt ttcaggtatt catgggtact ttcgcgaccg gaaacggcaa cgacctgata
     9541 acccaactta tgcagcagcg ccacggcggt actgccgacg ccaccactgg cacccgtcac
     9601 gacaatctcc ccgtcctgcg ggcgaacacc ggcatcttcc agcgccatca cacacagcat
     9661 ggcggtaaaa ccggcagtac cgataatcat tgctttacgc gcgtccagcc cttgcggcat
     9721 ggcaaccagc cagtcacctt tcactcgcgc ctgctccgcc agcccacccc agtggttttc
     9781 accaacgccc cagccagtga gtaacacctc ctgaccggca tgaaaacgcg gatcttcgct
     9841 ggtgcgtaca gttccggcaa aatcgatccc aggaatcatc ggaaaattac ggatgatttt
     9901 tcccttaccg gtaatcgcca gcgcatcttt atagttcagg ctcgaccagt gaacatcaac
     9961 cgtgacatcg ccctccggca ggcgactttc gtcaagtgtc tgtaccgatg cgagagtttt
    10021 gccgtcctgc tgttctaaaa gtaacgcctg cataagtggt cctcatgtgc atgatggatt
    10081 ggaaaataat ttctgaagac tatactcgct aatggaaaag caaagccgat gaagcgcaat
    10141 aaattgcgag ataaatctga tttgctagta tgcccgcttc ctcactatcg gagttaacac
    10201 aaggatgaga ttaacgacga aattttcggc ctttgttacg ctgctcaccg ggttaacaat
    10261 ttttgtgact ttgctgggct gttcgctaag tttctacaac gcaattcagt ataagtttag
    10321 tcatcgcgtt caggcggtgg cgacggcgat tgatacccac cttgtgtcga atgacttcag
    10381 cacattaagg ccacaaatta ccgaattaat gatgtcggca gatatcgttc gtgtagacct
    10441 gctccatggt gataaacagg tttataccct ggccagaaat ggtagttatc gtccggttgg
    10501 ctccagcgat ctgtttcgcg aactgagtgt tccgttgata aagcatccgg ggatgtcgct
    10561 gcgtctggtt tatcaggatc cgatgggcaa ctatttccat tctttaatga ctaccgcgcc
    10621 gctcacgggg gcgattggct ttatcattgt tatgctcttc ctggcggtac gctggttaca
    10681 acggcaactt gccgggcaag aattgctgga aacccgggct actcgtatct taaacggtga
    10741 gcgtggctct aatgtgttgg gaaccatcta tgaatggccg cccagaacca gcagtgcgct
    10801 agatacgctg cttcgtgaaa ttcagaacgc acgcgaacaa cacagccgtc ttgatacgct
    10861 gatccgctct tatgccgccc aggacgtgaa aaccggcctc aataaccgac tctttttcga
    10921 taatcagtta gcaacgttac tggaagatca ggagaaagta ggtacccacg ggatcgtgat
    10981 gatgattcgt ctgccggatt tcaatatgtt gagcgatacc tgggggcaca gccaggttga
    11041 agaacagttc ttcactctga cgaatctgct gtcgacattt atgatgcgct accctggcgc
    11101 actgctggcg cgttaccacc gcagtgattt tgctgcgctg ttaccgcacc ggacgttaaa
    11161 agaggcagag agcatcgccg gtcagttaat caaagccgtc gataccttgc cgaacaataa
    11221 aatgctcgat cgcgacgata tgatccacat tggtatctgc gcctggcgta gtggtcagga
    11281 taccgagcag gtaatggaac atgcagagtc tgccacgcgt aatgcgggat tgcagggcgg
    11341 caatagctgg gctatttacg atgactcgtt gcctgaaaaa ggacgcggta atgttcgctg
    11401 gcgtacgctt atcgagcaaa tgctcagtcg cggcggcccg cgcctttatc aaaaaccggc
    11461 ggttactcgc gaaggtcagg ttcatcatcg cgaactcatg tgccgcatct tcgatggtaa
    11521 tgaagaggtt agctcggcgg agtatatgcc gatggtcttg cagtttggct tatcggaaga
    11581 gtatgaccgt ctgcaaatca gccgtcttat tccactattg cgttactggc cagaggaaaa
    11641 tctggcgatt caggttaccg ttgagtcgct gattcgcccg cgttttcagc gttggctgcg
    11701 cgatacgtta atgcaatgtg aaaaatcaca acgaaaacgc ataattattg aacttgcaga
    11761 ggccgatgta ggtcaacata tcagtcgttt acaacctgtt attcgtttag tgaatgcttt
    11821 aggggtacgg gtagccgtca accaggctgg tttgacgctg gtaagcacca gttggatcaa
    11881 agaacttaat gttgagttac tcaagctcca tccggggctg gtcagaaaca ttgagaagcg
    11941 aacggagaac cagctgctgg ttcaaagtct ggtggaagcc tgctccggga ccagcaccca
    12001 agtttacgcc accggtgtgc gttcgcgaag cgagtggcag accctgattc agcgcggtgt
    12061 tacaggcggg caaggggatt ttttcgcgtc ctcacagcca cttgatacta acgtgaaaaa
    12121 atattcacaa agatactcgg tttaacctgc cgtttaatct gttttcacgt agaataacgc
    12181 gcgctgcgtc tcatgggagt gtgcttgtct gctcgccaga ttgttgcagc acatatgcag
    12241 atgaatgacc ttacgcggtt gcaaacaggc gaggaatgct gctgatgcat taagcctttc
    12301 tggactcagg cagagatttg taacaaagga aacgaactgc actaattttc accgtagcag
    12361 atgatttttg cgccttgtcg ctgctgcgtg tggttggtaa agtaagcgga ttttcttttc
    12421 cgccccagct ttcaggatta tcccttagta tgttgaaaaa atttcgtggc atgttttcca
    12481 atgacttgtc cattgacctg ggtactgcga ataccctcat ttatgtaaaa ggacaaggca
    12541 tcgtattgaa tgagccttcc gtggtggcca ttcgtcagga tcgtgccggt tcaccgaaaa
    12601 gcgtagctgc agtaggtcat gacgcgaagc agatgctggg ccgtacgccg ggcaatattg
    12661 ctgccattcg cccaatgaaa gacggcgtta tcgccgactt cttcgtgact gaaaaaatgc
    12721 tccagcactt catcaaacaa gtgcacagca acagctttat gcgtccaagc ccgcgcgttc
    12781 tggtttgtgt accggttggc gcgacccagg ttgaacgccg cgcaattcgt gaatccgcgc
    12841 agggcgctgg tgcccgtgaa gtcttcctga ttgaagaacc gatggctgcc gcaattggtg
    12901 ctggcctgcc ggtttctgaa gcgaccggtt ctatggtggt tgatatcggt ggtggtacca
    12961 ctgaagttgc tgttatctcc ttgaacggcg tggtttactc ctcttccgtg cgcattggtg
    13021 gtgatcgttt cgacgaagct atcatcaact atgtgcgtcg taattacggt tctctgatcg
    13081 gtgaagccac cgcagaacgt atcaagcacg aaatcggttc ggcttacccg ggcgatgaag
    13141 tccgtgaaat cgaagttcgt ggccgtaacc tggcagaagg tgttccacgc ggttttaccc
    13201 tgaactccaa cgaaatcctc gaagcactgc aggaaccgct gaccggtatt gtgagcgcgg
    13261 taatggttgc actggaacag tgcccgccgg aactggcttc cgacatctcc gagcgcggca
    13321 tggtgctcac cggtggtggc gcactgctgc gtaaccttga ccgtttgtta atggaagaaa
    13381 ccggcattcc agtcgttgtt gctgaagacc cgctgacctg tgtggcgcgc ggtggcggca
    13441 aagcgctgga aatgatcgac atgcacggcg gcgacctgtt cagcgaagag taatcggatg
    13501 caggcagggg aaatgtctgt ttaccctgcc tggtctgata cgagaatacg cataacttat
    13561 gaagccaatt tttagccgtg gcccgtcgct acagattcgc cttattctgg cggtgctggt
    13621 ggcgctcggc attattattg ccgacagccg cctggggacg ttcagtcaaa tccgtactta
    13681 tatggatacc gccgtcagtc ctttctactt tgtttccaat gctcctcgtg aattgctgga
    13741 tggcgtatcg cagacgctgg cctcgcgtga ccaactagaa cttgaaaacc gggcgttacg
    13801 tcaggaactg ttgctgaaaa acagtgaact gctgatgctt ggacaataca aacaggagaa
    13861 cgcgcgtctg cgcgagctgc tgggttcccc gctgcgtcag gatgagcaga aaatggtgac
    13921 tcaggttatc tccacggtta acgatcctta tagcgatcaa gttgttatcg ataaaggtag
    13981 cgttaatggc gtttatgaag gccagccggt catcagcgac aaaggtgttg ttggtcaggt
    14041 ggtggccgtc gctaaactga ccagtcgcgt gctgctgatt tgtgatgcga cccacgcgct
    14101 gccaatccag gtgctgcgca acgatatccg cgtaattgca gccggtaacg gttgtacgga
    14161 tgatttgcag cttgagcatc tgccagcgaa tacggatatt cgtgttggtg atgtgctggt
    14221 gacctccggt ctgggcggtc gtttcccgga aggctatccg gtcgcggttg tctcttccgt
    14281 aaaactcgat acccagcgcg cttatactgt gattcaggcg cgtccgactg caggactgca
    14341 acgtttgcgt tatctgctgc tgctgtgggg cgcggatcgt aacggcgcta acccgatgac
    14401 gccggaagag gtgcatcgtg ttgctaatga acgtctgatg cagatgatgc cgcaggtatt
    14461 gccttcgcca gacgcgatgg ggccaaagtt acctgaaccg gcaacgggga tcgctcagcc
    14521 gactccgcag caaccgacga caggaaatgc agctactgcg cctgctgcgc ccacacagcc
    14581 tgctgctaat cgctctccac aaagggctac gccgccgcaa agtggtgctc aaccgcctgc
    14641 gcgtgcgccg ggagggcaat agtggcgagc tatcgtagcc agggacgttg ggtaatctgg
    14701 ctctctttcc tcattgcgct gttgctgcaa atcatgccct ggccggataa cctgattgtt
    14761 ttccggccaa actgggtgtt actcatcttg ttgtattgga tcctggcctt gcctcatcgc
    14821 gtaaatgtgg gcacaggttt tgtgatgggt gccatactgg atctgatcag cggctcgacg
    14881 cttggcgtac gcgtattggc gatgagcatc attgcttacc tggtggcgct gaaataccag
    14941 cttttccgca acctcgcatt atggcagcag gcgctggtcg tcatgttgct ttcgctggtg
    15001 gtggatatta ttgttttctg ggcagagttt ttagtgatta acgtctcttt cagaccggaa
    15061 gtgttctgga gtagtgtagt caatggggtg ctctggccgt ggattttctt gctgatgcgt
    15121 aaagtccgtc agcagtttgc agtgcaataa aggtttctat gacttctctg tatttagctt
    15181 ccggttctcc gcgtcgtcag gagttacttg cgcaacttgg cgtgaccttt gaacgtattg
    15241 ttacaggcat tgaggagcag cgtcagccgc aggagagcgc gcagcagtat gttgtgcgtc
    15301 tggcgcgcga gaaagcacag gcgggtgtcg cgcaaacggc gcaggatctc ccggtgctgg
    15361 gtgcggatac tatcgttatc ctgaatggag aagtgctgga gaaaccgcgc gacgcagagc
    15421 atgcggcgca gatgttgcgc aaattatcgg gtcagaccca tcaggtgatg acggcagtgg
    15481 cgttggccga cagccagcac attctcgatt gcctggtggt caccgatgtg actttcagaa
    15541 cgttaacaga cgaagacatc gcgggctatg tcgccagcgg tgaaccgtta gataaagcag
    15601 gtgcatacgg tattcagggg ctgggtggct gttttgtcag gaagataaat ggcagctatc
    15661 acgccgtagt cggcttaccg ctggttgaaa cgtatgaatt attaagtaat tttaacgcac
    15721 tgcgtgagaa aagggataaa catgacggct gaattgttag taaacgtaac gccttcggaa
    15781 acgcgagtgg cgtatattga tggcggtatt ctgcaggaaa ttcatattga acgtgaggcg
    15841 cgacgcggaa tagtaggcaa tatctacaag ggtcgtgtaa gtcgtgtact tccgggtatg
    15901 caggcggctt ttgtagatat tgggctggat aaagccgcgt ttcttcatgc atccgatatc
    15961 atgccgcaca ccgaatgtgt ggcgggtgaa gaacaaaagc aattcacggt gcgcgacatc
    16021 tcggaactgg ttcgtcaggg gcaagatctg atggtgcagg tggtgaaaga tccgcttggc
    16081 actaaaggtg cgcgcctgac caccgatatc acgctgcctt ctcgctatct ggtgtttatg
    16141 ccaggggctt ctcacgttgg ggtttcccaa cgtattgaaa gcgaatcaga acgtgaacgc
    16201 ctgaaaaaag tggtcgcaga gtattgcgac gagcagggcg ggtttatcat ccgtaccgca
    16261 gcggaagggg ttggcgaggc tgaactggcc tccgatgccg cttatctgaa acgcgtctgg
    16321 accaaagtta tggagcgtaa aaaacgcccg cagacccgtt atcagctgta cggcgaactg
    16381 gcgctggcgc agcgtgttct gcgtgatttc gccgacgccg aactggaccg cattcgcgtt
    16441 gactcacgcc tgacttacga agcattgctg gagtttacct cggagtacat tcccgagatg
    16501 accagcaagc tggagcatta caccggacgc cagccgattt tcgatctctt tgatgtcgaa
    16561 aacgaaatcc agcgagcgct ggaacgcaaa gtagaactga aatccggtgg ttatctgatt
    16621 atcgaccaga ccgaagcgat gaccaccgtg gacatcaata ccggggcgtt tgtcggtcat
    16681 cgcaatctgg acgacaccat tttcaatacc aatattgaag cgacgcaggc tatcgctcgc
    16741 cagttacggt tgcgcaatct gggcgggatt atcattattg atttcatcga tatgaataat
    16801 gaagatcacc gccgacgcgt gctgcactcg ctggagcagg cattgagcaa agaccgggtg
    16861 aaaactagcg ttaatggttt ttcggcgctg gggctggtgg agatgacgcg taaacgcacc
    16921 cgcgaaagca ttgagcacgt actgtgtaac gaatgcccaa cctgccacgg tcgcggaacg
    16981 gtgaaaaccg tggaaacggt atgctatgaa atcatgcgcg agattgttcg tgtccaccat
    17041 gcttacgact ccgaccgttt cctggtctat gcttctccgg cagtagctga agccttgaaa
    17101 ggcgaagagt cacactcgct ggcggaagtg gaaattttcg ttggtaaaca ggttaaagta
    17161 caaattgaac cgctctataa ccaggagcag tttgacgtcg taatgatgta aacagatgct
    17221 gggccgccat ccggcaaagg gtttttgagt cacattttta gcagacaagg agtgacgggt
    17281 gaggcgattg ccggggattt tactgcttac tggagccgcg ctcgttgtga tcgctgccct
    17341 gctggttagc ggcctgcgta ttgctttacc gcatcttgac gcctggcgtc cggaaatcct
    17401 caacaaaata gaatccgcga ctggcatgcc ggtagaagcc agtcagctct cagccagctg
    17461 gcagaatttt ggcccgacgc ttgaagcaca cgacatccgt gcagaactaa aagatggcgg
    17521 cgaattttcg gttaaacgcg ttactctggc gctggatgtc tggcagagct tgttacatat
    17581 gcgctggcag tttcgcgacc tcactttctg gcagctgcgc tttcgcacca acactcctat
    17641 caccagcggt ggtggtaatg atagcctgga agccagtcac atcagcgatc tgtttcttcg
    17701 tcaatttgac catttcgatc tccgcgacag tgaagtcagt tttctgacgc catccggtca
    17761 gcgcgccgag ctggcgatcc cacaactcac ctggctgaac gatccacgtc gacaccgtgc
    17821 ggaaggcctg gtaagcctct ccagccttac cggacagcac ggcgtgatgc aggtgcgcat
    17881 ggatttgcgc gatgatgagg ggttgttaag caatggtcgc gtctggctac aggcggatga
    17941 catcgacctg aagccgtggc tcggtaaatg gatgcaggac aatattgctc tggaaacggc
    18001 acagttctcc cttgaaggct ggatgacgat cgacaaaggc gatgtaaccg gcggtgacgt
    18061 ctggctgaaa cagggcggtg ccagctggtt gggcgagaag caaacgcata cgctgtcggt
    18121 ggataatctg accgcgcata ttacgcgtga aaatccgggc tggcagttct ctattcccga
    18181 tacacggatc acgatggacg gcaaaccctg gccgagcgga gcattgacgc tggcctggat
    18241 accggaacag gacgttggcg gcaaagacaa taaacgcagt gacgaactcc ggattcgcgc
    18301 cagtaatctg gagctggcag gcctggaggg catacgcccg ctggccgcga aactttcacc
    18361 tgcactgggt gatgtttggc gctccacaca accgagcggc aagattaaca ctctggcgct
    18421 ggatatcccg cttcaggcgg cagacaagac ccgttttcag gcatcgtgga gcgatctggc
    18481 ctggaagcaa tggaaattat taccgggtgc ggaacacttc tccgggacgc tttccggcag
    18541 cgttgaaaat ggtttgctta ccgcgtcgat gaagcaggca aagatgcctt acgaaacggt
    18601 attccgtgcg ccactggaaa tcgccgacgg ccaggcaact ataagctggc tgaacaatga
    18661 caaaggtttc cagctggatg ggcgtaatat tgacgttaaa gccaaagccg tccatgcgcg
    18721 cggcggtttt cgttacctgc aacctgctaa cgatgaaccc tggctgggta ttctggctgg
    18781 catcagtacc gatgatggtt cacaagcctg gcgctatttc ccggaaaact tgatgggtaa
    18841 agacctggtt gattacttaa gtggcgcgat tcagggcggt gaagcggata acgcgacgct
    18901 ggtttatggt ggcaatccgc aactcttccc ctataaacac aacgaaggtc agtttgaagt
    18961 gctggtgccg ctgcgcaacg cgaagtttgc cttccagccg gactggcctg cattaactaa
    19021 ccttgatatt gaactggact ttattaacga cggtttatgg atgaaaaccg atggcgttaa
    19081 tctgggcggc gtgcgcgcga gtaatctcac cgcagtgatc cctgactact cgaaagaaaa
    19141 actgctgatt gacgctgaca ttaaaggtcc gggtaaagcc gttggccctt actttgatga
    19201 gacaccgctg aaagattctc tgggtgcgac cctgcaagaa ctccagctcg acggcgatgt
    19261 gaatgctcgc ttacatcttg atatcccgct gaacggcgaa ctggtaaccg cgaaaggtga
    19321 agtgacgctg cgtaataaca gtctgtttat caaaccactc gacagcaccc tgaaaaattt
    19381 gagcggtaaa ttcagcttta tcaatggcga tctgcaaagt gaaccactga cagcaagctg
    19441 gtttaatcag ccgttgaacg tggatttttc caccaaagaa ggggcaaaag cctaccaggt
    19501 tgcggtgaat ctcaacggta actggcaacc ggcgaaaacc agcgttctgc ctgaagcggt
    19561 gaacgaagca ttgagtggca gcgtggcgtg ggatggtaaa gtgggcattg atctgcctta
    19621 tcatgctggc gcgacctata acgtagagat gaacggcgat ctgaataatg tgagtagtca
    19681 cttaccttca ccgttagcca aacctgcggg tgaaccacta gcggtaaacg ttaaggttga
    19741 tggcaatctc aacagctttg aattaaccgg acaggctggt gcggataacc atttcaatag
    19801 ccgctggttg cttggtcaaa agctgacgct cgatcgtgct atttgggcgg cagacagtaa
    19861 aacgctcccg ccgttgccgg aacaaagtgg cgttgaactc aatatgccgc cgatgaatgg
    19921 tgccgagtgg ctggccctgt tccagaaagg cgctgcggag agtgtcggtg gtgcagcgag
    19981 tttcccacaa cacataacgt tacgtacgcc tatgttgtca ctgggaaatc agcaatggaa
    20041 taacctgagt attgtttcgc aaccgacggc aaatggcacc ctggttgagg cgcaagggcg
    20101 tgaaatcaac gccacgctag cgatgcgtaa taacgcgccg tggctggcga atatcaaata
    20161 tctttattac aacccgagcg tggcgaaaac tcgtggtgat tcaacgccgt catcaccttt
    20221 cccgacaacg gagcgcatta acttccgtgg ctggccggac gcacaaatac gatgcacaga
    20281 gtgctggttc tgggggcaaa aattcggtcg cattgacagt gatatcacca tttctggcga
    20341 tacgttaacg ctgaccaatg gactgattga tactggtttc tcgcggctta ctgccgatgg
    20401 tgaatgggtt aataatccgg agaatgaacg tacctcgctg aaaggaaaac tgcgcgggca
    20461 gaaaattgat gccgccgcag aattttttgg tgtcacgacg cccatacgcc agtcgtcatt
    20521 taatgtggat tacgatttac actggcgcaa agcaccctgg caaccagatg aggcgacgtt
    20581 gaatggcatc attcatactc aactgggtaa aggcgaaatt accgaaatca ataccggaca
    20641 tgccgggcaa ttgctgcgct tattgagcgt tgatgccctg atgcgtaagc tgcgttttga
    20701 tttcagagac acttttggcg aagggttcta ttttgactcc attcgcagca ccgcgtggat
    20761 taaagacggg gttatgcaca ccgacgacac gctggtggat ggcctggagg cggatatcgc
    20821 catgaaaggg tcggtaaatc tggtacgtcg cgacctgaat atggaagcgg ttgtcgcacc
    20881 agagatttct gcgacggtgg gcgtggctgc ggcttttgcg gttaacccca ttgttggcgc
    20941 ggcagtattt gcagccagta aagtgctggg gccgctgtgg agcaaagtct ccattttgcg
    21001 ctatcacatt tcgggtccgc tggacgatcc gcaaatcaac gaagtgttgc gccaaccgcg
    21061 taaagaaaaa gcgcaatgat ttgacgaggg cgcgtaattg ccccaatctc atatgataat
    21121 cgttgccaaa ggccaacgag ccggaacata actgtaggcc ggatagggcg ttcacgccgc
    21181 atccggcagc cgtaaaaaat cctctactgc agtaactaac gagtagcaaa aacgatgagt
    21241 ctgaacctgg taagtgaaca attgctagcg gcgaacggcc tgaaacatca ggacttgttc
    21301 gcgatcctcg gtcaactggc cgaacgtcgc cttgattatg gcgatctcta ttttcagtcg
    21361 agctatcacg aatcctgggt tttagaagac cgcattatta aagatggttc ttacaacatc
    21421 gatcagggcg ttggtgtgcg tgcaatcagt ggtgaaaaaa ccggatttgc ttacgctgac
    21481 caaatcagcc tgctggcgct ggaacagagt gcgcaagcgg cgcgcaccat cgtccgtgat
    21541 agtggtgatg gcaaagtaca gacgctgggc gcggtagagc atagcccgtt gtatacctcg
    21601 gtagatccgc tgcaaagcat gagccgtgaa gagaagctgg atatcctgcg tcgcgtcgat
    21661 aaggttgccc gcgaagcgga caagcgcgta caagaagtga ctgccagcct cagcggcgtt
    21721 tatgaattaa ttctggttgc ggccaccgac ggcacgctgg cggcggatgt tcgtccgctg
    21781 gtgcgtcttt ccgtgagcgt tctggtcgaa gaagatggca aacgcgaacg cggtgccagt
    21841 ggcggcggcg gtcgttttgg ttatgagttc ttccttgccg atcttgacgg cgaagtccgt
    21901 gcggatgcat gggcaaaaga agcagtgcgt atggcgctgg tcaatctttc tgccgttgct
    21961 gcaccagcgg gcaccatgcc ggtagtactt ggcgcaggtt ggccgggcgt gctgttgcat
    22021 gaagcggtag gtcacggtct ggaaggcgac ttcaaccgcc gcggcacttc agtatttagt
    22081 gggcaggtcg gggagctggt ggcttcagaa ctgtgtaccg tggttgatga cggcacgatg
    22141 gtcgatcgcc gtggttcggt ggcgattgat gacgaaggta cgccaggcca gtacaacgtg
    22201 ctgattgaga acggcattct gaaaggctac atgcaggata aactcaacgc gcgtttgatg
    22261 gggatgacgc cgactggcaa cggtcgccgt gaatcctacg cccatctgcc catgccgcgt
    22321 atgaccaaca cctatatgct gccgggtaaa tcgaccccgc aggaaattat tgaatccgtt
    22381 gagtacggta tctatgcacc gaactttggt ggcggtcagg tggatattac atccggcaaa
    22441 ttcgttttct ccacttcaga agcgtatctg attgaaaacg gtaaagtaac gaagccggtg
    22501 aaaggcgcga cgttgattgg ttccggtatc gaaaccatgc agcagatttc gatggttggc
    22561 aacgacctga aactggataa cggcgtgggt gtctgcggta aagaagggca aagtttgccg
    22621 gttggcgtgg gccagccaac gctgaaagtt gataacctga ctgttggcgg tactgcgtaa
    22681 taatttcatt attttcagaa ggataattaa tctttctacg tgcacgaacg gtcccctcgc
    22741 tcctctgggg ttagggtgag gggaacccgt tggcacaggt ttgtagaacg taacagtaca
    22801 atatgaatta cttctctttc ccgcgcccgt gcatctcctg aaacaattta ccgacctcaa
    22861 caaaataatc cgtcagcgag ttgatcacga cctgtacctt cagcggcagc ttatcttttt
    22921 cggtatataa cgcataaacc gggcgtggat ctgactgata acgcggcagc aggatctcca
    22981 gctcaccgcg attgatctcg ttgatcaccc acatcagcgg cacgtaggcg atcccggcac
    23041 ccgccgttag ccagcgcacc agcgtcatcg gatcattagt cacaaatctc ccttgcggga
    23101 tcaggcgagt cgagatccct tccggtgcaa tcagttcaaa ttcattgtcg ggccgcacgc
    23161 tgtattcaag ccatgaatgg ctacttaaat cggcgggttt ttccggtatg ccgtattgtg
    23221 tgagatagct tttcgcggcg cacaccacca ttggcatcgc gccaagacgg cgggaaaaca
    23281 ggctggaatc ctgcaacgcg ccgacgcgga tcaccacatc cagaccgtcg gcaatcaggt
    23341 cgggggctgg aattccggta accagattga cgctcaaacc tgggtattct ttcagcattt
    23401 tggctgtcag cccggcgaga acattttgtg ccatagttga agaacagcca atgcgtagcg
    23461 tcccgatggg ggtgttattg aaggcataca gttgctcatg aacatcctgc acttcatgaa
    23521 gcatacgacg gcagccctgg tagtaaattc taccggcttc ggtcaggcca atgctgcgtg
    23581 tgctacggtt taacagcttt acctgcaact catcttccag ttttgacacc gtctgactga
    23641 tggacgaaac gctcatctgt agctgtctgg cggcggcggt aaaagagcca aattcaacta
    23701 ctttggcaaa caccgacatg cgttttagtc gttccattat tcactctgac ttaaaagtga
    23761 tttagatcac ataatataga taacagcata acagttacgc taatatatta aatatcaatc
    23821 tacagcaatg ttgctctcgc ccggctttcc atgcccttct ctgcggcgac agatgctgaa
    23881 aataataacg cctgctctct ctatacaacc aaggtcaaca tgagtctgtt tcccgttatc
    23941 gtggtgtttg ggctgtcctt cccaccgata ttttttgaat tgcttttatc actggcgatt
    24001 ttctggctgg tgcgccgggt acttgtgcca acaggtatct acgactttgt ctggcatccg
    24061 gcgttgttca acaccgcgct ctattgctgc ttgttttatt tgatatcgcg actgttcgtt
    24121 tgaggttgaa gtgaaaacac taataagaaa attctcccgt acggccatca cggtcgtatt
    24181 agtcattctg gccttcatcg caatttttaa tgcctgggtc tattacaccg aatccccctg
    24241 gacgcgtgac gcgcgcttta gcgctgacgt cgttgcgatc gcgccggacg tttctggact
    24301 cattacccag gtgaatgttc atgataacca gctggtgaaa aaaggacaga tactgttcac
    24361 catcgaccag ccgcgctatc aaaaggcgct tgaggaagcg caagccgatg ttgcttatta
    24421 tcaggtactg gcacaggaga aacgccagga ggccggacgt cgtaaccgtc tcggtgtgca
    24481 ggcgatgtct cgcgaagaga tcgaccaggc taacaacgta ctacaaacgg ttctgcatca
    24541 gttagcgaaa gcgcaggcga cccgcgatct ggcaaaactg gatcttgaac gcacggtgat
    24601 ccgcgcgcca gcagatggct gggtgaccaa cctcaacgtc tataccggtg agtttattac
    24661 tcgaggatca acggcggttg cgctggtgaa acagaactcc ttctatgtac tggcctatat
    24721 ggaagaaact aagctggaag gggtgcgtcc ggggtatcgt gcagagatca cgccgcttgg
    24781 cagtaacaaa gtgctgaaag ggactgttga tagtgttgcc gctggggtca ccaacgccag
    24841 cagcacgcgt gacgacaaag ggatggcgac catcgactct aaccttgaat gggtgcgttt
    24901 ggcgcaacgt gttccggttc gtatttgtct cgacaaccag caagagaaca tctggcctgc
    24961 gggcaccact gctacagtgg tggtcactgg caaacaagat cgcgacgaaa gccaggattc
    25021 gttcttccgt aaaatggccc atcgcctgcg tgagtttggt taatcacgat gggtattttc
    25081 tccattgcta accaacatat tcgctttgcg gtaaaactgg cgaccgccat tgtactggcg
    25141 ctgtttgttg gctttcactt ccagctggaa acgccacgct gggcggtact gacagcggcg
    25201 attgttgccg ccggtccggc ctttgctgcg ggaggtgaac cgtattctgg cgctattcgc
    25261 tatcgtggct ttttgcgcat catcggcaca tttattggct gtattgccgg actggtgatc
    25321 atcattgcga tgatccgcgc accattattg atgattctgg tgtgctgtat ctgggccggt
    25381 ttttgtacct ggatatcctc gctggtacga atagaaaact cgtacgcgtg ggggctggcc
    25441 ggttataccg cgctgatcat tgtgatcacc attcagccgg aaccattgct tacgccgcag
    25501 tttgccgtcg aacgttgtag cgagatcgtt atcggtattg tgtgtgcgat tatggcggat
    25561 ttgctctttt ctccgcgatc gatcaaacaa gaagtggatc gagagctgga aagtttgctg
    25621 gtcgcgcaat atcaattaat gcaactctgt atcaagcatg gcgatggtga agttgtcgat
    25681 aaagcctggg gcgacctggt gcgacgcacc acggcgctac aaggcatgcg cagcaacctg
    25741 aatatggaat cttcccgctg ggcgcgggcc aatcgacgtt taaaagcgat caatacgcta
    25801 tcgctgacgc tgattaccca atcctgcgaa acttatctta ttcagaatac gcgcccggaa
    25861 ttgatcactg atactttccg cgaatttttt gacacgccgg tagaaaccgc gcaggacgtc
    25921 cacaagcagc tcaaacgcct gcggagagtt atcgcctgga ccggggaacg ggaaacgcct
    25981 gtcaccattt atagctgggt cgcggcggca acgcgttatc agcttctcaa gcgcggcgtt
    26041 atcagtaaca caaaaatcaa cgccaccgaa gaagagatcc tgcaaggcga accggaagtc
    26101 aaagtagagt cagccgaacg tcatcatgcg atggttaact tctggcgaac cacactttcc
    26161 tgcattctgg gcacgctttt ctggctgtgg acgggctgga cttccggcag tggtgcaatg
    26221 gtgatgattg cggtagtgac gtcactggca atgcgtttgc cgaatccacg catggtggcg
    26281 atcgacttta tctacgggac gctggccgcg ctgccgttag ggctgctcta ctttttggtg
    26341 attatcccta atacccaaca gagcatgttg ctgctgtgta ttagcctggc agtgctggga
    26401 tttttcctcg gtatagaagt acagaaacgg cgactgggct cgatgggggc gctggccagc
    26461 accataaata ttatcgtgct ggataacccg atgacttttc atttcagtca gtttctcgac
    26521 agcgcattag ggcaaatcgt cggctgtgtg ctcgcgttca ccgttatttt gcttgtgcgg
    26581 gataaatcgc gcgacaggac cggacgtgta ctgcttaatc agtttgtttc tgccgctgtt
    26641 tccgcgatga ctaccaatgt ggcacgtcgt aaagagaacc acctcccggc actttatcag
    26701 cagctgtttt tgctgatgaa taagttccca ggggatttgc cgaaatttcg cctggcgctg
    26761 acgatgatta tcgcgcacca gcgcctgcgt gatgcgccga tcccggttaa cgaggattta
    26821 tcggcgtttc accgacaaat gcgccgcaca gcagaccatg tgatatctgc ccgtagcgat
    26881 gataaacgtc gtcggtactt tggccagttg ctggaagaac tggaaatcta ccaggaaaag
    26941 ctacgcatct ggcaagcgcc accgcaggtg acggaaccgg ttcatcggct ggcggggatg
    27001 ctccataagt atcaacatgc gttgaccgat agttaagtca aaaccgacgc caaaagcgtc
    27061 ggttttttca tggctatact tagcgatgca cggcagaact cgccgcgaaa cgtgacggtg
    27121 gcaacagatg aatatttata cctttgattt tgatgagatt gagagtcagg aggattttta
    27181 tcgtgacttt agccaaacct ttggtctggc gaaagataag gtacgcgatc tcgactcact
    27241 atgggatgtg ttaatgaacg atgtcctgcc gctaccactt gagattgaat ttgttcatct
    27301 gggagagaaa acgcgtcgcc gttttggcgc gttaatattg ctgtttgatg aggcagagga
    27361 agagctggaa gggcatttgc gttttaatgt tcgtcattag cgcaaaaaaa agcccccgaa
    27421 ccgggggcaa tatcgtcgga caagacgatg agggtttatt tgtacagttc agccgtagcg
    27481 tgccaggtgt caccgctacg agcttcagta atctggtagg ccgttgcgcc tttctcttcc
    27541 gcttttttgt tcagcatttc acgcatatcc attggcgaag acgccacacc acttacggat
    27601 acggtcccga ttgcttcacg attttgtgct tgtgcagcat caatggagtc ggcagcgaat
    27661 gcaccgaaag agagaacaga aagtacgctt aatgcagcaa cagtggtttt gattttcatg
    27721 atttttacct cgacataatc tttttgctgg gtctttgttt cgtgaccctt atcacaaaat
    27781 caagtataca cta
//
LOCUS       DAPGWB010000055        27752 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.055, whole genome shotgun sequence.
ACCESSION   DAPGWB010000055 DAPGWB010000000
VERSION     DAPGWB010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 27752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27752
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.055"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            37..708
                     /locus_tag="RHX79_002208"
     CDS             37..708
                     /locus_tag="RHX79_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016241930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HDV2197373.1"
                     /translation="MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKG
                     IYIAAVVMTTGNSGTDGIIDRHEESRNALKILGCHQTIHLNFADTRAHLQLNDMISAL
                     EDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSF
                     MPQVFESVKEEYFTVKLAALKKHKSQERRDYMRHDRLRAVAQFRGQQVNSELGEGFVI
                     HKMIL"
     gene            718..1914
                     /locus_tag="RHX79_002209"
     CDS             718..1914
                     /locus_tag="RHX79_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV2197374.1"
                     /translation="MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPC
                     LAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALM
                     NGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHI
                     RATVKLPMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTL
                     VANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIF
                     PMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWIGVVCVIGAFSAWFHRCWLL
                     VPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEASTAYSQPSVTGT
                     EKLSEA"
     gene            1892..2473
                     /locus_tag="RHX79_002210"
     CDS             1892..2473
                     /locus_tag="RHX79_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001308433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDV2197375.1"
                     /translation="MKNYLKLNVKEKNIQIADQVIIDETAGEVVIGANTRICHGAVIQ
                     GPVVIGANCLIGNYAFIRPGTTISNGVKIGFATEIKNAVIEAEATIGPQCFIADSVVA
                     NQAYLGAQVRTSNHRLDEQPVSVRTPEGIIATGCDKLGCYIGQRSRLGVQVIILPGRI
                     ISPNTQLGPRVIVERNLPAGTYSLRQELIRTGD"
     gene            2475..3248
                     /locus_tag="RHX79_002211"
     CDS             2475..3248
                     /locus_tag="RHX79_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiO family outer membrane beta-barrel protein"
                     /protein_id="HDV2197376.1"
                     /translation="MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAY
                     AELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTP
                     VFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTH
                     YDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQR
                     IQPLTEQLNLGLTAGKVWYDTPTDDYNGLQLAAHLTWKF"
     gene            3433..3708
                     /gene="frmR"
                     /locus_tag="RHX79_002212"
     CDS             3433..3708
                     /gene="frmR"
                     /locus_tag="RHX79_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formaldehyde-responsive transcriptional
                     repressor FrmR"
                     /protein_id="HDV2197377.1"
                     /translation="MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAA
                     VRGAANGLMAEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK"
     gene            3743..4852
                     /gene="frmA"
                     /locus_tag="RHX79_002213"
     CDS             3743..4852
                     /gene="frmA"
                     /locus_tag="RHX79_002213"
                     /EC_number="1.1.1.284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase"
                     /protein_id="HDV2197378.1"
                     /translation="MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDA
                     FTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGK
                     TNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEAN
                     HEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALES
                     AHRGWGQSVIIGVAGSGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGD
                     IDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIRY"
     gene            4945..5778
                     /gene="fghA"
                     /locus_tag="RHX79_002214"
     CDS             4945..5778
                     /gene="fghA"
                     /locus_tag="RHX79_002214"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HDV2197379.1"
                     /translation="MELIEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAANEKLP
                     VLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGF
                     YLNATQAPWNEHYKMYDYIRNELPDLVMQHFPATTRKSISGHSMGGLGALVLALRNPD
                     EYVSVSAFSPIVSPSQVPWGQQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVDQG
                     LSDDFYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNM
                     R"
     gene            complement(5903..6442)
                     /locus_tag="RHX79_002215"
     CDS             complement(5903..6442)
                     /locus_tag="RHX79_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2058 domain-containing protein"
                     /protein_id="HDV2197380.1"
                     /translation="MAKLTLQEQLLKAGLVTSKKAAKVERTAKKSRVQAREARAAVEE
                     NKKAQLERDKQLSEQQKQAALAKEYKAQVKQLIEMNRITIANGDIGFNFTDGNLIKKI
                     FVDKLTQAQLINGRLAIARLLVDNNSEGEYAIIPASVADKIAQRDASSIVLHSALSAE
                     EQDEDDPYADFKVPDDLMW"
     gene            complement(6544..7755)
                     /gene="mhpT"
                     /locus_tag="RHX79_002216"
     CDS             complement(6544..7755)
                     /gene="mhpT"
                     /locus_tag="RHX79_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308435.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-(3-hydroxy-phenyl)propionate transporter MhpT"
                     /protein_id="HDV2197381.1"
                     /translation="MSTRTPSSSSSRLMLTIGLCFLVALMEGLDLQAAGIAAGGIAQA
                     FALDKMQMGWIFSAGILGLLPGALVGGMLADRYGRKRILIGSVALFGLFSLATAIAWD
                     FPSLVFARLMTGVGLGAALPNLIALTSEAAGPRFRGTAVSLMYCGVPIGAALAATLGF
                     AGANLAWQTVFWVGGVVPLILVPLLMRWLPESAVFAGEKQAAPPLRALFAPETATATL
                     LLWLCYFFTLLVVYMLINWLPLLLVEQGFQPSQAAGVMFALQMGAASGTLMLGALMDK
                     LRPVTMSLLIYSGMLASLLALGTVSSFNGMLLAGFVAGLFATGGQSVLYALAPLFYSS
                     QIRATGVGTAVAVGRLGAMSGPLLAGKMLALGTGTVGVMAASAPGILVAGLAVFILMS
                     RRSRMQPCADA"
     gene            complement(7931..8944)
                     /gene="dmpG"
                     /locus_tag="RHX79_002217"
     CDS             complement(7931..8944)
                     /gene="dmpG"
                     /locus_tag="RHX79_002217"
                     /EC_number="4.1.3.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-2-oxovalerate aldolase"
                     /protein_id="HDV2197382.1"
                     /translation="MNGKKLYISDVTLRDGMHAIRHQYSLENVRQIAKALDDARVDSI
                     EVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLPGIGTIHDLKNAWQA
                     GARVVRVATHCTEADVSAQHIQYARELGMDTVGFLMMSHMTTPENLAKQAKLMEGYGA
                     TCIYVVDSGGAMNMSDIRDRFRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCD
                     RIDASLAGMGAGAGNAPLEVFIAAADKLGWQHGTDLYALMDAADDLVRPLQDRPVRVD
                     RETLALGYAGVYSSFLRHCETAAARYGLSAVDILVELGKRRMVGGQEDMIVDVALDLR
                     NNK"
     gene            complement(8950..9891)
                     /gene="mhpF"
                     /locus_tag="RHX79_002218"
     CDS             complement(8950..9891)
                     /gene="mhpF"
                     /locus_tag="RHX79_002218"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetaldehyde dehydrogenase"
                     /protein_id="HDV2197383.1"
                     /translation="MSKRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGL
                     ARARRMGVATTHEGVIGLMNMPEFADIDIVFDATSAGAHVKNDAALREAKPDIRLIDL
                     TPAAIGPYCVPVVNLEANVDQLNVNMVTCGGQATIPMVAAVSRVARVHYAEIIASIAS
                     KSAGPGTRANIDEFTETTSRAIEVVGGAAKGKAIIVLNPAEPPLMMRDTVYVLSDEAS
                     QDDIEASINEMAEAVQAYVPGYRLKQRVQFEVIPQDKPVNLPGVGQFSGLKTAVWLEV
                     EGAAHYLPAYAGNLDIMTSSALATAEKMAQSLARKAG"
     gene            complement(9888..10697)
                     /gene="mhpD"
                     /locus_tag="RHX79_002219"
     CDS             complement(9888..10697)
                     /gene="mhpD"
                     /locus_tag="RHX79_002219"
                     /EC_number="4.2.1.80"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308432.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-4-pentenoate hydratase"
                     /protein_id="HDV2197384.1"
                     /translation="MTKHTLEQLAADLRRAAEQGEAIAPLRDLIGIDNAEAAYAIQHI
                     NVQYDVVQGRRVVGRKVGLTHPKVQQQLGVDQPDFGTLFADMCYGDNEIIPFSRVLQP
                     RIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSRIRDWSIQFVDTVADNAS
                     CGVYVIGGPAQRPAGLDLKNCAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMASL
                     GEPLRAGDIILTGALGPMVAVNAGDRFEAHIEGIGSVAATFSSAAPKGSLS"
     gene            complement(10707..11573)
                     /gene="mhpC"
                     /locus_tag="RHX79_002220"
     CDS             complement(10707..11573)
                     /gene="mhpC"
                     /locus_tag="RHX79_002220"
                     /EC_number="3.7.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414883.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-6-oxonona-2,4-dienedioate hydrolase"
                     /protein_id="HDV2197385.1"
                     /translation="MSYQPQTEAATSRFLNVEEAGKTLRIHFNDCGQGDETVVLLHGS
                     GPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSIVNSGSRSDLNARILKSVVDQ
                     LDIAKIHLLGNSMGGHSSVAFTLNWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQ
                     LYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFP
                     DFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADA
                     FNQLVLNFLARP"
     gene            complement(11591..12535)
                     /gene="mhpB"
                     /locus_tag="RHX79_002221"
     CDS             complement(11591..12535)
                     /gene="mhpB"
                     /locus_tag="RHX79_002221"
                     /EC_number="1.13.11.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxyethylcatechol 2,3-dioxygenase"
                     /protein_id="HDV2197386.1"
                     /translation="MHAYLHCLSHSPLVGYVDPAQEVLDEVNGVIASARERIAAFSPE
                     LVVLFAPDHYNGFFYDVMPPFCLGVGATAIGDFGSAAGELPVPVELAEACAHAVMKSG
                     IDLAVSYCMQVDHGFAQPLEFLLGGLDKVPVLPVFINGVATPLPGFQRTRMLGEAIGR
                     FTSTLNKRVLFLGSGGLSHQPPVPELAKADAHMRDRLLGSGKDLPASERELRQQRVIS
                     AAEKFVEDQRTLHPLNPIWDNQFMTLLEQGRIQELDAVSNEELSAIAGKSTHEIKTWV
                     AAFAAISTFGNWRSEGRYYRPIPEWIAGFGSLSARTEN"
     gene            complement(12537..14201)
                     /locus_tag="RHX79_002222"
     CDS             complement(12537..14201)
                     /locus_tag="RHX79_002222"
                     /EC_number="1.14.13.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid
                     hydroxylase"
                     /protein_id="HDV2197387.1"
                     /translation="MAIQHPDIQPAVNHSVQVAIAGAGPVGLMMANYLGQMGIDVLVV
                     EKLDKLIDYPRAIGIDDEALRTMQSVGLVDDVLPHTTPWHAMRFLTPKGRCFADIQPM
                     TDEFGWPRRNAFIQPQVDAVMLEGLSRFPNVRCLFSRELEVFSQQNDEVTLHLKTAEG
                     QRETVKAQWLVACDGGASFVRRTLNVPFEGKTAPNQWIVVDIANDPLSTPHIYLCCDP
                     VRPYVSAALPHAVRRFEFMVMPGETEEQLREPQNMRKLLSKVLPNPDNVELIRQRVYT
                     HNARLAQRFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLALVIQGKARDAL
                     LDTYQQERRDHAKAMIDLSVTAGNVLAPPKRWQGTLRDGVSWLLNYLPPVKRYFLEMR
                     FKPMPQYYGGALVREGEAKHSPVGKMFIQPKVTLENGDVTLLDNAIGANFAVIGWGCN
                     PLWGMSDEQIQQWRALGTRFIQVVPEVQIHTAQDNHDGVLRVGDTQGRLRSWFAQHNA
                     SLVVMRPDRFVAATAIPQTLGNTLNKLASVMTLTRPDADVSVEKVA"
     gene            14278..15225
                     /gene="mhpR"
                     /locus_tag="RHX79_002223"
     CDS             14278..15225
                     /gene="mhpR"
                     /locus_tag="RHX79_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414880.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator MhpR"
                     /protein_id="HDV2197388.1"
                     /translation="MIFYCALSIGRVFSATIKTCPNVHQVHNFVLTIEMSINMQNNEQ
                     TEYKTVRGLTRGLMLLNMLNKLDGGASVGLLAELSGLHRTTVRRLLETLQEEGYVRRS
                     PSDDSFRLTIKVRQLSEGFRDEQWISALAAPLLGDLLREVVWPTDVSTLDVDAMVVRE
                     TTHRFSRLSFHRAMVGRRLPLLKTASGLTWLAFCPEQERKELIEMLAARPGDDYQLAR
                     EPLKLQAILARARKEGYGQNYRGWDQEEKIASIAVPLRSEQRVIGCLNLVYMASAMTI
                     EQAAEKHLPALQRVAKQIEEGVESQAILVAGRRSGVHLR"
     gene            15302..16384
                     /gene="lacI"
                     /locus_tag="RHX79_002224"
     CDS             15302..16384
                     /gene="lacI"
                     /locus_tag="RHX79_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414879.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor LacI"
                     /protein_id="HDV2197389.1"
                     /translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAE
                     LNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERS
                     GVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACANVPALFLDVSDQTPINSII
                     FSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREG
                     DWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDT
                     EDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNT
                     QTASPRALADSLMQLARQVSRLESGQ"
     gene            16507..19581
                     /gene="lacZ"
                     /locus_tag="RHX79_002225"
     CDS             16507..19581
                     /gene="lacZ"
                     /locus_tag="RHX79_002225"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase"
                     /protein_id="HDV2197390.1"
                     /translation="MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEAR
                     TDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYT
                     NVTYPITVNPPFVPTENPTGCYSLTFNIDESWLQEGQTRIIFDGVNSAFHLWCNGRWV
                     GYGQDSRLPSEFDLSTFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHK
                     PSTQISDFHVATHFNDDFSRAVLEAEVQMYGELRDELRVTVSLWQGETQVASGTAPFG
                     GEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEASDVGFR
                     EVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSH
                     YPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRN
                     HPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVD
                     EDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGG
                     FVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQ
                     QQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIE
                     LPELPQPESAGQLWLTVRVVQPNATAWSEAGHISSWQQWRLAENLSVTLPAASHAIPH
                     LTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSE
                     ATRIDPNAWVERWKVAGHYQAEAALLQCSADTLADAVLITTAHAWQHQGKTLFISRKT
                     YRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAA
                     CFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETS
                     HRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK"
     gene            19633..20886
                     /gene="lacY"
                     /locus_tag="RHX79_002226"
     CDS             19633..20886
                     /gene="lacY"
                     /locus_tag="RHX79_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactose permease"
                     /protein_id="HDV2197391.1"
                     /translation="MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSD
                     TGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYN
                     ILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGI
                     MFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFR
                     QPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIM
                     FFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCF
                     KYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGF
                     TLISVFTLSGPGPLSLLRRQVNEVA"
     gene            20952..21563
                     /gene="lacA"
                     /locus_tag="RHX79_002227"
     CDS             20952..21563
                     /gene="lacA"
                     /locus_tag="RHX79_002227"
                     /EC_number="2.3.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactoside O-acetyltransferase"
                     /protein_id="HDV2197392.1"
                     /translation="MNMSMTERIKAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEV
                     EKRESLIKEMFATVGENAWIEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNV
                     LIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGA
                     GSVVIKDIPPNVVAAGVPCRVIREINDRDKQYYFRDYKVESSV"
     gene            complement(21666..22847)
                     /gene="cynX"
                     /locus_tag="RHX79_002228"
     CDS             complement(21666..22847)
                     /gene="cynX"
                     /locus_tag="RHX79_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308421.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyanate transporter CynX"
                     /protein_id="HDV2197393.1"
                     /translation="MRNHQKTFTMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFS
                     VAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSVLLLS
                     SALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSE
                     TWYQTLAWWALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPRAWTLGVYFGLIN
                     GGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLA
                     LVLQLVGFCGFIWLPLQLPVLWAMVCGLGLGGAFPLCLLLALDHSAQPAIAGKLVAFM
                     QGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLWVKE
                     A"
     gene            complement(22853..23323)
                     /gene="cynS"
                     /locus_tag="RHX79_002229"
     CDS             complement(22853..23323)
                     /gene="cynS"
                     /locus_tag="RHX79_002229"
                     /EC_number="4.2.1.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyanase"
                     /protein_id="HDV2197394.1"
                     /translation="MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVT
                     AALLGQQALPADAARLVGAKLDLDEDAILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQ
                     VYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF"
     gene            complement(23354..24013)
                     /gene="cynT"
                     /locus_tag="RHX79_002230"
     CDS             complement(23354..24013)
                     /gene="cynT"
                     /locus_tag="RHX79_002230"
                     /EC_number="4.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase CynT"
                     /protein_id="HDV2197395.1"
                     /translation="MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRL
                     VPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCG
                     AMTAIASCQCMDHMPAVSHWLRYADSARVVNEARPHSDLPSKAAAMVRENVIAQLANL
                     QTHPSVRLALEEGRIALHGWVYDIESGSIAAFEGATRQFVPLAANPRVCAIPLRQPTA
                     A"
     gene            24123..25022
                     /gene="cynR"
                     /locus_tag="RHX79_002231"
     CDS             24123..25022
                     /gene="cynR"
                     /locus_tag="RHX79_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator CynR"
                     /protein_id="HDV2197396.1"
                     /translation="MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLG
                     VPLFDRSGRTIRLTDAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFT
                     SYFIGPLMADFYARYPGITLQLQEMSQEKIEDLLCRDELDVGIAFAPVHSPELEAIPL
                     LTESLALVVAQHHPLAACEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVV
                     IEANSISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQT
                     AAAKAFLHMALEECADVGENESR"
     gene            complement(25062..26345)
                     /gene="codA"
                     /locus_tag="RHX79_002232"
     CDS             complement(25062..26345)
                     /gene="codA"
                     /locus_tag="RHX79_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine/isoguanine deaminase"
                     /protein_id="HDV2197397.1"
                     /translation="MSNNALQTIINARLPGKEGLWQIHLQDGKISAIDAQSGVMPITE
                     NSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVK
                     QRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGI
                     LSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDE
                     IDDEQSRFVETVAALAHREGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVAN
                     PLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHM
                     GLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSANLIILPAENGFDALRRQ
                     VPVRYSVRGGKVIASTQPAQTTVYLEQPEAIDYKR"
     gene            complement(26335..27594)
                     /gene="codB"
                     /locus_tag="RHX79_002233"
     CDS             complement(26335..27594)
                     /gene="codB"
                     /locus_tag="RHX79_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HDV2197398.1"
                     /translation="MSQDNNFSQGPVPQSARKGVLALTFVMLGLTFFSASMWTGGTLG
                     TGLSYHDFFLAVLIGNLLLGIYTSFLGYIGAKTGLTTHLLARFSFGVKGSWLPSLLLG
                     GTQVGWFGVGVAMFAIPVGKATGLDINLLIAVSGLLMTVTVFFGISALTVLSVIAVPA
                     IACLGGYSVWLAVNGMGGLDALKAVVPAQPLDFNVALALVVGSFISAGTLTADFVRFG
                     RNAKLAVLVAMVAFFLGNSLMFIFGAAGAAALGMADISDVMIAQGLLLPAIVVLGLNI
                     WTTNDNALYASGLGFANITGMSSKTLSVINGIIGTVCALWLYNNFVGWLTFLSAAIPP
                     VGGVIIADYLMNRRRYEHFATTRMMSVNWVAILAVALGIAAGHWLPGIVPVNAVLGGA
                     LSYLILNPILNRKTTAAMTHVEVNSVE"
BASE COUNT         6614 a         7538 c         7217 g         6383 t
ORIGIN      
        1 gcttgtagta taataaataa aatggagtgt cattaagtgg ataaggtttt agattcagcc
       61 ctcctttctt cggcaaataa aagaaagggt atccttgcta ttggcgcaca tcctgacgat
      121 atagaattag gctgtggcgc atcgcttgct cgtcttgcgc aaaaaggaat ttatatcgca
      181 gccgtggtga tgactaccgg caactctggt acagatggaa taatcgatcg ccatgaagaa
      241 tcgcgcaacg ccctaaagat attagggtgc caccaaacta ttcatcttaa ttttgctgac
      301 acccgcgctc atttacagct caatgatatg atttccgctc tggaagacat cattaaaaat
      361 caaattcctt ctgatgttga aatcatgcgg gtatatacca tgcatgatgc cgaccgccat
      421 caggatcatc tcgctgttta tcaagcttca atggttgcct gccgcactat tccacaaatt
      481 ctcggctacg aaaccccaag tacctggctt tcatttatgc ctcaggtttt tgaatccgtt
      541 aaagaagaat atttcacagt caaacttgct gcattaaaaa aacataaaag ccaggaacga
      601 cgtgattata tgcgtcatga tcgcctgcgt gcagttgcac aatttcgcgg gcaacaggtc
      661 aatagcgaat tgggtgaagg ctttgtaatt cataaaatga ttctttgagc aaattgcatg
      721 aaaacctgga tatttatctg tatgtccata gcaatgttgc tatggttttt aagtacgcta
      781 agacgtaaac ccagtcaaaa gaaaggctgt attgacgcca ttatacctgc gtataacgaa
      841 ggcccgtgtc tggcgcagtc actggataat ctactgcgta acccttattt ttgccgggta
      901 atttgcgtta acgacggctc cacggacaat accgaagcgg tcatggcgga agtcaaacgc
      961 aaatggggcg accgctttgt tgccgtcacg caaaaaaata ccggtaaagg tggtgcgctg
     1021 atgaatggcc tcaattatgc cacctgcgac caggtttttt taagtgatgc cgacacctat
     1081 gttccgcccg atcaagacgg aatgggctat atgctggcag aaattgagcg cggtgctgat
     1141 gccgtaggcg gcattccctc tactgcgttg aaaggcgcgg ggctgttacc gcacatccgc
     1201 gcgaccgtaa agttgccgat gattgttatg aagcgcacgc tacagcagct cctgggcggc
     1261 gcaccgttta ttatcagcgg tgcctgcggg atgttccgta ctgatgtatt gcgtaagttc
     1321 ggtttctcgg atcgtactaa agtcgaagac cttgatctca cctggacatt agtggcaaac
     1381 ggctaccgta ttcggcaggc gaatcgctgc atcgtatacc cacaggaatg caacagcccg
     1441 cgtgaggagt ggcgtcgctg gcggcgttgg attgtgggat acgcggtctg tatgcgcctg
     1501 cataaaagac ttttatttag ccgcttcggt atcttcagta tatttcctat gctgttggtt
     1561 gtgctttatg gcgttgggat ttatctcact acctggttta atgaattcat caccaccggg
     1621 ccgcatggtg tggtgttggc aatgtttccg cttatctgga tcggcgtagt ttgtgttatt
     1681 ggtgctttta gcgcctggtt tcatcgttgc tggttgttgg tgcctttagc gccgctttcc
     1741 gttgtgtatg tattattagc ttatgccatc tggattattt atggacttat tgcctttttt
     1801 actggacgcg aacctcagcg cgacaaaccc acccgctatt ccgcactggt ggaagcgtca
     1861 accgcttatt cccaaccttc tgtcacagga actgaaaaac tatctgaagc ttaatgttaa
     1921 agagaaaaat attcagattg cagaccaggt aattattgat gaaactgcag gtgaagttgt
     1981 tatcggcgcg aatacccgta tttgtcatgg tgccgttatt cagggtccgg tagtgattgg
     2041 cgcaaactgc ctgataggta attatgcgtt tattcgtcct ggcacaacaa tcagcaatgg
     2101 tgtaaaaatt ggttttgcca ccgaaattaa aaatgcggtt attgaagcgg aagcaacgat
     2161 tggtccgcaa tgttttattg ccgactcggt agttgcaaac caggcatatt tgggcgcaca
     2221 agtacgtacc agtaatcatc gtctggatga acagcctgtg tctgttcgaa ctccagaggg
     2281 aattatcgct accggatgcg ataaattagg ttgttatatc gggcagcgtt cacgccttgg
     2341 cgtacaagtt attattttgc ctgggcgaat tatttccccg aacacgcaac ttggcccgcg
     2401 cgtgattgta gaacgtaatt tacctgccgg aacttattca ctccgacaag aacttatccg
     2461 tacaggagat taaaatgata aaacggacgt tattagcggc ggccattttt agcgcattgc
     2521 ccgcttatgc cgggttaact tccattaccg cgggctacga ttttaccgat tattctggcg
     2581 atcatggcaa ccgtaattta gcgtatgctg aactggtggc gaaagttgaa aacgcaacgc
     2641 tgctttttaa tctttcccag gggcgtcgtg attatgaaac tgaacatttc aatgccactc
     2701 gcggtcaggg tgcggtctgg tataaatgga ataactggct gacaacccga acgggtattg
     2761 cctttgcgga taatacgccg gtctttgccc gccaggattt tcgtcaggat attaacctgg
     2821 ccctgttgcc aaaaacgctt ttcacgaccg gttatcgcta cactaaatat tacgatgatg
     2881 tcgaagtcga tgcctggcaa ggcggcgtat cactctatac tggcccggtg atcaccagct
     2941 accgctatac ccattatgac tccagcgatg caggtggtag ttatagcaat atgatttccg
     3001 tgcgtctgaa tgacccgcgc ggcactggtt atacgcaact atggctaagc cgcggaacag
     3061 gtgcttacac ctatgactgg acgccagaaa cacgctacgg cagcatgaag agcgtcagtc
     3121 tgcaacgtat tcaaccgctg actgagcaac ttaatctcgg gctgacggca ggtaaagtgt
     3181 ggtacgacac cccaaccgat gattataacg gtctgcaact tgcagcccat ctgacctgga
     3241 aattctgatt ccttctgccg cccgctatcc ggggcggcct tccctgccga ttagcccccc
     3301 ctttcctctt tgttttccga ccacattcac cggataaatt ttattctcca gtgttatata
     3361 ctataggggg gtatgcattg acatatagca taccccccta tagtatattg cgtgcagatg
     3421 atgaggtgcg aaatgcccag tactccggaa gagaagaaaa aggtccttac tcgagttcgt
     3481 cgtattcgag ggcagattga tgctctggaa cggtcgctgg agggtgatgc cgaatgccgt
     3541 gccatactcc aacagatcgc tgccgttcgg ggcgcggcta acgggctgat ggcagaagtg
     3601 cttgaaagcc atatccggga aacgtttgac cgaaatgact gctacagccg cgaagtcagc
     3661 caatccgttg acgacactat tgaactggtt cgagcctatc ttaaatagct gaatctatta
     3721 ccatattgag gaagagcgag agatgaaatc acgtgctgcc gttgcatttg ctcccggtaa
     3781 accgctggaa atcgttgaaa ttgacgttgc accaccgaaa aaaggtgaag tgctgattaa
     3841 agtcacccat accggcgttt gccataccga cgcatttacc ctctctgggg atgacccgga
     3901 aggtgtattc ccggtggttc tcggtcacga aggggccggc gttgtggttg aagtcggtga
     3961 aggcgtaacc agcgtcaaac ctggcgacca tgtgatcccg ctttacaccg cggagtgcgg
     4021 cgagtgtgag ttctgtcgtt ctggcaaaac taacctctgt gttgcggttc gcgaaaccca
     4081 gggtaaaggc ttgatgccag acggcaccac ccgtttttct tacaacgggc agccgcttta
     4141 tcactacatg ggatgctcaa cattcagtga atacaccgtg gtcgcggaag tgtctctggc
     4201 caaaattaat ccagaagcaa accatgaaca cgtctgcctg ctgggctgtg gcgtgaccac
     4261 cggtattggc gcggtgcaca acacagctaa agtccagcca ggtgattctg ttgccgtgtt
     4321 tggtcttggc gcgattggtc tggcagtggt tcagggcgcg cgtcaggcga aagcgggacg
     4381 gattatcgct atcgatacca acccgaagaa attcgatctg gcgcgtcgct tcggtgctac
     4441 cgactgcatt aacccgaatg actacgacaa accgattaaa gatgtcctgc tggatatcaa
     4501 caaatggggt atcgaccata cctttgaatg catcggtaac gtcaacgtga tgcgtgcggc
     4561 gctggaaagt gcgcaccgcg gctggggtca gtcggtgatc atcggggtgg caggttctgg
     4621 tcaggaaatt tccacccgtc cattccagtt ggtcactggt cgcgtatgga aaggttccgc
     4681 gtttggcggc gtgaaaggtc gttcccagtt accgggtatg gttgaagatg cgatgaaagg
     4741 tgatatcgat ctggaaccgt ttgtcacgca taccatgagc cttgatgaaa ttaatgacgc
     4801 cttcgacctg atgcatgaag gcaaatccat tcgaaccgta attcgttact gatttcccgc
     4861 aggtataccc cgtccacttc agacggggtt cttaatactc tccctgggca gccgtccggg
     4921 ggattaaccg tgagataatg actgatggaa ctcattgaaa aacatgccag ctttggcggc
     4981 tggcaaaatg tgtatcggca ttattcccaa tcactgaaat gtgaaatgaa tgtcggcgtc
     5041 tatctcccac caaaagccgc gaatgaaaaa ttgccggtgc tgtactggct ttcgggcctg
     5101 acctgcaacg agcagaattt cattactaaa tcggggatgc agcgttacgc ggctgagcac
     5161 aacattattg ttgttgcgcc ggacaccagt ccgcgaggca gtcatgtcgc agatgccgac
     5221 cgttacgatc tcgggcaagg tgccgggttt tacctgaacg caacgcaagc gccgtggaat
     5281 gaacattaca aaatgtatga ctatatccgc aacgagctgc cggatttagt gatgcaacat
     5341 tttccggcaa cgaccagaaa gtctatctct ggtcattcta tgggcgggct gggcgcgctg
     5401 gtgctggcgt tacgtaaccc agatgaatat gtcagcgtct cggcgttttc gcccattgtc
     5461 tccccatcgc aagtaccgtg gggacagcaa gcctttgccg catatcttgg tgaaaataaa
     5521 gatgcctggt tggattacga tccggtgagt cttatttcac aaggtcaacg cgttgcggaa
     5581 atcatggttg atcaggggtt gagtgatgat ttttacgcgg aacagctgcg gactccaaat
     5641 cttgaaaaga tctgccagga gatgaatatc aagacgttaa tccgttatca cgagggttac
     5701 gaccacagct attattttgt ctccagtttt attggcgagc atattgccta ccacgccaat
     5761 aaactgaata tgcgttgata atagtgcacg actgccggat gcggcgtgaa cgccttatcc
     5821 gcctacattt cgcccgcagg ccgtaggcat gataagacgc gcatagcgtc gcatcaggca
     5881 tctgcgcacg acttatctat gtttaccaca tcaaatcatc aggcactttg aagtcggcat
     5941 acggatcgtc ttcatcctgc tcttcggcac tgagcgcgct gtgcaacact atactgctgg
     6001 catcacgctg agctatttta tcggcaacgc tggcgggaat aatggcgtat tcaccttcgc
     6061 tattgttatc gaccaacaag cgagcaatcg ccagacgacc attaatcaac tgcgcctgtg
     6121 tgagcttatc gacaaaaatc ttcttaatca gattgccgtc agtgaagtta aaaccaatat
     6181 cgccattggc aatggtgatt cggttcattt caatgagctg cttcacctga gctttatatt
     6241 ctttcgccaa cgcagcttgt ttttgttgct cgctaagctg tttatcacgc tcaagctgtg
     6301 cctttttatt ttcttctacc gccgcccgag cttcacgcgc ctgaacgcgc gattttttcg
     6361 ccgttctctc caccttcgcc gcttttttgc tggtgactaa tcctgctttg agcaactgct
     6421 cttgtaaggt aagttttgcc atctttgttt ccaaacccgc tgaataattt ttagcgagta
     6481 tacctgtaaa cgccgtgggt gtattggggg caagtccctt tcgcccctgc taaataaggc
     6541 gcgtcaggca tcggcacacg gctgcattct tgatctccga ctcatcaaaa taaacaccgc
     6601 caacccagca acaagaatac ccggtgcaga agcggccatt acgccgaccg tgccagtgcc
     6661 taatgccagc attttcccgg ccagtaacgg accgctcata gcccccagac gccctaccgc
     6721 cacggctgtt cccacacctg ttgcgcggat ctgcgaactg taaaacaacg gtgccagggc
     6781 atacaaaacg ctttgcccac ctgtcgcaaa caaccccgcg acaaatcccg ccagcaacat
     6841 accgttaaat gacgacaccg ttccaagcgc cagcagcgaa gctaacatgc cgctataaat
     6901 cagtagcgac atggttactg gacgcagctt atccatcaat gcgcccaaca ttaacgtccc
     6961 gcttgccgcc cccatttgca gggcaaacat cacccctgcc gcctgcgatg gctggaatcc
     7021 ttgctccacc aaaagtagcg gtagccagtt gatcaacata taaaccacca gcagagtgaa
     7081 gaaataacac aaccacagca gcagcgtcgc ggttgccgtt tctggcgcaa ataaggcacg
     7141 cagtggtggc gcagcctgtt tttcgccagc gaaaaccgct gactccggca gccagcgcat
     7201 taatagcggc accagaatca acggcaccac accacctacc caaaacaccg tttgccatgc
     7261 taagtttgcc cccgcgaaac ccagtgtcgc cgccagcgcc gcgccaatgg gaacaccgca
     7321 atacatcagg ctcactgccg tcccacgaaa acgtggaccc gcggcttcag acgtcagggc
     7381 gataagattc ggcaacgccg cccccagccc gacaccggtc atcagccgcg caaagaccag
     7441 tgaggggaaa tcccaggcaa tcgccgttgc cagtgagaac aaaccaaaca gcgcaactga
     7501 gccaatcaaa atacgcttac gaccataacg gtctgccagc atcccgccaa ccaacgcgcc
     7561 gggtagcaaa ccgagtattc cggcgctaaa tatccagccc atttgcattt tatcgagtgc
     7621 gaaagcctgg gcgatgccac ccgccgcaat gccagccgcc tgaagatcca gcccttccat
     7681 cagagcgacc aaaaaacaaa gcccgatggt cagcatcagg cgggatgaag atgatgaagg
     7741 ggtacgagtc gacataagat gaacctcatt gcgagtgcag gtgaatcgcg actgatacat
     7801 tgccagccgc gtaatcagaa ctatttaatg actgcctacg ggcgaaatgt aggccggata
     7861 aggcgttcac gccgcatccg gctgtcgtgc tgggatgggc atacaaaatg cacgttatcg
     7921 gcagtcatca ttatttgttg ttgcgcagat ccagcgccac gtcgacgatc atatcctcct
     7981 ggccgccaac catccggcgt ttgcccagct caacgagaat atccaccgca cttaagccat
     8041 aacgcgccgc cgccgtttca cagtgacgca ggaagctcga gtaaacacca gcgtatccca
     8101 gcgccagcgt ttcgcgatcg actcgtaccg gtcgatcctg caacggacgc accaggtcgt
     8161 cggcggcatc cattaacgca tagagatcgg tcccatgctg ccagcccagt ttatccgcgg
     8221 cggcaataaa cacttccagc ggtgcgttac ctgcgcccgc gcccattccc gcgaggctgg
     8281 cgtcgattcg gtcgcagccc tcttccaccg ccgcgataga gttcgccacg ccaagactca
     8341 ggttatggtg agcgtgcatg ccagtttgcg tttctggttt cagctctgct ttcagggcgc
     8401 ggaaacggtc acggatatcg ctcatgttca tcgcaccgcc agaatccacc acataaatac
     8461 aggtcgcacc gtagccttcc atcagctttg cctgcttggc gagattctcc ggcgtggtca
     8521 tatggctcat catcagaaaa ccaacggtgt ccattccgag ctcgcgggca tactgaatat
     8581 gctgggcgga aacatcagct tcggtacagt gcgttgccac acgaaccacc cgcgcgccag
     8641 cctgccaggc atttttcaga tcgtgaatag tgccgattcc tggcagcaac aacgtcgcga
     8701 ttttggcgtg cttcaccaca tccgccgctg cttcaatcca ttcaaggtcg ctatgtgcgc
     8761 cgaaaccata gttaaagctg gaaccttgca aaccgtcgcc gtgggccact tcaatcgaat
     8821 ccacgcgggc atcgtccagt gctttggcaa tctggcgaac gttttccagc gaatactgat
     8881 gacgaatggc gtgcataccg tcacgcaatg tgacgtccga gatataaagt tttttaccgt
     8941 tcatgccgct catcctgcct tgcgcgccag tgactgggcc attttttccg ctgtcgccag
     9001 cgcactggaa gtcataatat cgaggttgcc cgcataggca ggcagataat gcgctgcgcc
     9061 ttcgacttcc agccagaccg ctgttttcag cccggagaac tgacccacgc ccggcaaatt
     9121 aaccggttta tcctgcggga taacttcaaa ctgcacgcgc tgtttcaggc gatatcccgg
     9181 tacgtaagcc tgcaccgcct cagccatttc attgattgag gcttcgatat catcttgtga
     9241 agcttcgtcg ctcaatacat acaccgtgtc acgcatcatc aacggtggct ctgctgggtt
     9301 aagcacaata atcgccttcc cttttgccgc gccgcccacc acttcaatgg ctcgggaagt
     9361 ggtttccgta aattcatcga tattggcacg cgtgccaggt ccggcagatt tactggcgat
     9421 agaagcgata atttcggcgt aatgaacacg cgccacgcgt gaaactgccg ccaccattgg
     9481 aatggtggcc tggccgccgc aggtgaccat gttgacgttc agttgatcga cgttcgcctc
     9541 gaggttaacc accggcacgc agtaagggcc gatggcagca ggcgtcaggt caattaagcg
     9601 aatatccggt ttcgcttcgc gtaaagcggc atcgtttttc acatgcgcgc ccgcgctggt
     9661 cgcatcaaat acaatgtcga tatcagcaaa ttcaggcatg ttcatcagcc cgatcacccc
     9721 ttcatgggtg gtggcgacgc ccatacgtct ggcacgcgcc agaccgtcgg actgaggatc
     9781 aatgccgacc atcaccgcca tctccagatg ctgaccgtga cgcaaaattt taatcatcag
     9841 atcggtgcca atgttgccag aaccgataat ggcgacttta cgcttactca tgacagactt
     9901 ccttttgggg ctgcgcttga aaatgtcgca gcaactgaac ctatgccttc aatatgggct
     9961 tcaaaacgat cgcccgcatt caccgccacc atcgggccta atgccccggt aagaatgata
    10021 tctccggcgc gcagcggttc acccagactg gccattttgc gtgccagcca gacggcggca
    10081 ttaagcggat gtcccaggca ttcgctgccg cgcccgctgg aaacctcttc gttattacgc
    10141 gtcatcttca tggcgcagtt tttcaggtct aaccccgccg gacgttgcgc cggaccgccg
    10201 atgacataca ccccgcagga agcgttatct gccacggtat cgacaaactg aatcgaccag
    10261 tcgcgaatgc ggctccccac cacttccagc gccggaagta cccattcaat ggcgttatac
    10321 agttcgtcga aggtgatatc agttgcgggt aaatcgcggt tcaacaccag tgcgatctcc
    10381 gcttcaatgc ggggttgcag aacacgggaa aaaggaatga tttcgttatc gccataacac
    10441 atgtcggcaa ataacgtccc aaaatccggt tgatcaacgc ccagttgttg ttgcactttc
    10501 ggatgcgtca ggcccacttt acgccctacc acgcgacgcc cctgcacaac gtcatattgc
    10561 acatttatgt gctgaatggc gtaggccgct tcagcgttat cgataccaat cagatcgcgc
    10621 agcggcgcaa tcgcttcgcc ctgctctgcg gcgcggcgta aatccgccgc cagttgctca
    10681 agagtatgct tcgtcatgac cattccttaa gggcgtgcga ggaaattcag caccaattga
    10741 ttgaaagcgt cggcatgttc ccactgcgcc cagtgaccac agtcgcggaa gatatgcagt
    10801 tcagaaccgg caatgccgga cagcagacgc agacccgcat ccatcggcac aaagcggtcg
    10861 ttgcgccccc agacaatcag ggtttgcgct ttgatttccg ccagacgtgg gccaaaatcc
    10921 gggaactgtt tcggattagc ttccaggctc ttaacgaagt tttccaggtg atcgcggcgc
    10981 gacagcatat tattcaggcg cgcttcaaac agggcgtcgg tcaaatcgct ggtatcgaaa
    11041 acgaagatat ccatcatcag cttcaggttt tcgatagtcg gctgacgata aagctgattc
    11101 agtcgcttaa taccttcggt tggcatcggc gtaaacaaac tcatgccgcc cgtaccgccg
    11161 cccatcagca ccagtttgcc gacgcgctcc ggccagttaa gggtgaacgc cacagaacta
    11221 tggccgccca tcgagttgcc cagcaggtgg attttggcga tatccagttg atccaccacg
    11281 cttttcagga ttcgtgcatt aagatccgat cgtgaaccac tattaacgat cgaatcgctt
    11341 ttgccccaac ccggacaatc cagcaggatt acccgatagc ccgcctctac cagcggatcg
    11401 atattgcggc tgaagttcgc ccagccagta gcacccgggc cggaaccatg cagcaggaca
    11461 acggtttcgt cgccttgtcc gcagtcatta aaatggatgc gcagcgtttt acccgcttct
    11521 tctacattca gaaaacggct ggtggcggct tcggtttgtg gctgataact catcatcttc
    11581 tcctgcatat tcagttctct gttctggcgc ttaacgagcc aaatccggca atccactccg
    11641 ggattgggcg gtaataacgc ccttcgctac gccagttgcc aaatgtagaa atagcggcaa
    11701 aagcggcgac ccaggttttg atttcatgtg tcgactttcc ggcaatggcg gaaagctctt
    11761 cgttactgac ggcatccagt tcctgtatgc gtccctgctc cagcaaagtc atgaactggt
    11821 tatcccaaat cgggttgagc ggatgcagag ttctctgatc ctcaacaaac ttctcagcgg
    11881 cgctaatcac ccgttgctga cgcaattcgc gctcactggc gggtaaatct ttcccgctcc
    11941 ccaacagacg gtcgcgcata tgggcatcgg ctttcgccag ttcgggcacc ggcggctgat
    12001 gggaaagccc accggaaccc aggaacagca cgcgtttatt gagagtgctg gtgaaacgtc
    12061 caatggcttc acccaacatg cgggtacgct ggaaaccggg cagcggcgtg gcgacaccgt
    12121 tgatgaacac aggcagaact ggcaccttat ccagcccacc gagcaggaac tccagcggct
    12181 gggcgaaccc gtggtccacc tgcatacagt aagaaacggc aagatcgatc ccgctcttca
    12241 tgacagcatg cgcacaggcc tccgccagct ccacaggcac gggcagctct cctgccgcac
    12301 tgccgaaatc accaattgcc gtcgctccaa cgcctaaaca gaacggtggc atcacgtcat
    12361 agaaaaagcc gttgtagtga tctggcgcaa acagcaccac cagttcaggg gagaaagccg
    12421 caatacgctc gcgggcgctg gcaatcacgc cattgacctc atcgagtacc tcttgcgccg
    12481 ggtcgacata ccccaccaac ggcgagtggg aaagacagtg aagataagcg tgcatatcag
    12541 gctacctttt cgacagaaac gtcggcatca gggcgggtca gcgtcatcac cgacgccagt
    12601 ttattcagcg tattgcccag ggtttgcgga atggcggtgg cggcaacaaa gcgatccggg
    12661 cgcatcacca ccagcgaagc attgtgttgc gcgaaccagc tacgcagacg accttgcgta
    12721 tcgcccacgc gtagcacgcc gtcgtggtta tcctgtgcgg tatgaatttg cacttccggc
    12781 accacctgaa tgaagcgtgt gcccaacgcg cgccactgct ggatttgctc gtcgctcatc
    12841 ccccacagtg gattgcatcc ccagccaatt accgcgaagt tcgcgccaat cgcgttatcg
    12901 agcagcgtca cgtcaccgtt ttccagcgtg actttcggct gaataaacat cttgccgacc
    12961 ggagagtgct tcgcttcgcc ctcacgcacc agcgcaccgc cgtaatattg cggcatcggc
    13021 ttgaagcgca tttcgaggaa atagcgtttt actggcggca gataattcaa cagccaggaa
    13081 acgccgtcac gtaacgtacc ctgccagcgt ttcggcggag ccagcacgtt gcccgccgtc
    13141 acggacaggt caatcatcgc tttggcgtga tcgcgacgtt cttgttgata ggtatcgagc
    13201 agcgcatcgc gggctttccc ctggataacc aacgccagtt tccaggcgag gttaaaggcg
    13261 tcgcgcatac cactgttata gccctgcccc tgccacaccg gcatgatgtg cgcggcatcg
    13321 cccgccagca gtacgcgatc aatacggaaa cgttgcgcca gtcgcgcgtt atgggtgtag
    13381 acacgctggc gaatcaattc aacattgtcc ggattaggca gcactttgct taacagcttg
    13441 cgcatatttt gcggctcacg cagctgctct tcggtttctc ccggcatcac cataaattca
    13501 aagcgacgta ccgcatgagg cagcgcggca gaaacatacg ggcgcaccgg atcgcaacac
    13561 aaatagatat gcggcgtact taacggatcg ttggcgatat ctaccacaat ccactgattt
    13621 ggcgcagttt taccttcaaa cggcacattc agagtgcgac ggacaaaact tgctccaccg
    13681 tcacaggcta ccagccactg ggctttgacc gtttcccgct gcccttctgc cgttttcagg
    13741 tgcaaggtca cttcgtcatt ttgctggctg aagacctcca gctcgcggga aaacaagcag
    13801 cgcacattcg gaaaacgcga caacccttcc agcatcaccg catcgacctg aggctgaata
    13861 aaggcgttac ggcgcggcca gccaaattca tcggtcattg gctgaatatc agcaaaacag
    13921 cggcctttcg gggtgagaaa acgcatcgcg tgccacggcg tagtgtgcgg cagaacatca
    13981 tcgaccaggc cgaccgactg catggtgcgc agcgcctcgt catcaatacc aatcgcacgc
    14041 gggtagtcga tcaacttatc gagtttttcc accaccagca cgtcaatgcc catctggccg
    14101 agatagttcg ccatcatcag cccgaccgga ccggcaccag cgatcgccac ctgaacgcta
    14161 tggttaacag caggctggat gtcagggtgt tgtattgcca tttcagtacc tcacgactcg
    14221 gacaaaatgc cgttgcgcgc acagtacggc gcaacttatt ttgttaaaaa catgtaaatg
    14281 attttttatt gtgcgctcag tataggaagg gtgttttcgg ctacaatcaa aacatgcccg
    14341 aatgtgcacc aggtgcacaa ctttgtttta actatagaaa tgtcaattaa tatgcagaac
    14401 aatgagcaga cggaatacaa aaccgtgcgc ggcttaaccc gcggtctaat gttattaaat
    14461 atgttaaata aacttgatgg cggtgccagc gtcgggctgc tggcggaact cagcggcctg
    14521 catcgcacca ctgtgcggcg actgctggag acgctgcagg aagagggata tgtccgccgt
    14581 agcccctccg atgatagttt tcgactgacc atcaaagtgc ggcaattaag cgaaggattt
    14641 cgtgacgaac agtggatttc tgcactggcg gccccgctgc tgggcgatct gttgcgcgaa
    14701 gtggtatggc caacagatgt gtccaccctg gatgttgatg caatggtggt acgcgaaacc
    14761 acccaccgtt tcagccgctt atcctttcac cgggcaatgg tcgggcgacg tttaccgctc
    14821 ctgaaaaccg cctcgggcct gacctggctg gccttttgcc cggaacaaga acgcaaggaa
    14881 ttaatcgaaa tgttagccgc ccgccccggt gatgactatc aactggcacg agaaccgtta
    14941 aagctgcaag ccattctggc gcgcgcgcgc aaagagggtt acggacagaa ctaccgcggc
    15001 tgggatcagg aggagaagat cgcctctatc gccgtaccgc tgcgcagtga acaacgggtg
    15061 attggctgtc tgaatctggt gtatatggcg agcgcaatga ccattgaaca ggcagcggaa
    15121 aagcatcttc cggcgctaca acgggtagca aaacagatcg aagaaggggt tgaatcgcag
    15181 gctattctgg tggccggacg gcgaagcggc gtgcatttgc gttaatgccg ccgaatggcg
    15241 caaaaccttt cgcggtatgg catgatagcg tccggaagag agtcaattca gggtggtgaa
    15301 tgtgaaacca gtaacgctat acgatgtcgc agagtatgcc ggtgtctctt atcagaccgt
    15361 ttcccgcgtg gtgaaccagg ccagccacgt ttctgcgaaa acgcgggaaa aagtggaagc
    15421 ggcgatggcg gagctgaatt acattcccaa ccgcgtggca caacaactgg cgggcaaaca
    15481 gtcgttgctg attggcgttg ccacctccag tctggccctg cacgcgccgt cgcaaattgt
    15541 cgcggcgatt aaatctcgcg ccgatcaact gggtgccagc gtggtggtgt cgatggtaga
    15601 acgaagcggc gtcgaagcct gtaaagcggc ggtgcacaac cttctcgcgc aacgcgtcag
    15661 tgggctgatc attaactatc cgctggatga ccaggatgcc attgctgtgg aagcagcctg
    15721 cgctaatgtt cctgctttat ttcttgatgt ctctgaccag actcccatca acagtattat
    15781 tttctcccat gaagacggta cgcgactggg cgtggagcat ctggtcgcat tgggtcacca
    15841 gcaaatcgcg ctgttagcgg gcccattaag ttctgtctcg gcgcgtctgc gtctggcggg
    15901 ctggcataaa tatctcactc gcaatcaaat tcagccgata gcggaacggg aaggcgactg
    15961 gagtgccatg tccggttttc aacaaaccat gcaaatgctg aatgagggca tcgttcccac
    16021 tgcgatgctg gttgccaacg atcagatggc gctgggcgca atgcgcgcca ttaccgagtc
    16081 cgggctgcgc gttggtgcgg atatctcggt agtgggatac gacgataccg aagacagctc
    16141 gtgttatatc ccgccgttaa ccaccatcaa acaggatttt cgcctgctgg ggcaaaccag
    16201 cgtggaccgc ttgctgcaac tctctcaggg ccaggcggtg aagggcaatc agctgttgcc
    16261 cgtctcactg gtgaaaagaa aaaccaccct ggcgcccaat acgcaaaccg cctctccccg
    16321 cgcgttggcc gattcattaa tgcagctggc acgacaggtt tcccgactgg aaagcgggca
    16381 gtgagcgcaa cgcaattaat gtgagtcagc tcactcatta ggcaccccag gctttacact
    16441 ttatgcgtcc ggctcgtatg ttgtgtgaaa ttgtgagcgg ataacaattt cacacaggaa
    16501 acagctatga ccatgattac ggattcactg gccgtcgttt tacaacgtcg tgactgggaa
    16561 aaccctggcg ttacccaact taatcgcctt gcagcacatc cccctttcgc cagctggcgt
    16621 aatagcgaag aggcccgcac cgatcgccct tcccaacagt tgcgcagcct gaatggcgaa
    16681 tggcgctttg cctggtttcc ggcaccagaa gcggtgccgg aaagctggct ggagtgcgat
    16741 cttcctgagg ccgatactgt cgtcgtcccc tcaaactggc agatgcacgg ttacgatgcg
    16801 cccatctaca ccaacgtgac ctatcccatt acggtcaatc cgccgtttgt tcccacggag
    16861 aatccgacgg gttgttactc gctcacattt aatattgatg aaagctggct acaggaaggc
    16921 cagacgcgaa ttatttttga tggtgttaac tcggcgtttc atctgtggtg caacgggcgc
    16981 tgggtcggtt acggccagga cagccgtttg ccgtctgaat ttgacctgag cacattttta
    17041 cgcgccggag aaaaccgcct cgcggtgatg gtgctgcgct ggagtgacgg cagttatctg
    17101 gaagatcagg atatgtggcg gatgagcggc attttccgtg acgtctcgtt gctgcacaaa
    17161 ccgagcacac aaatcagcga tttccatgtt gccactcact ttaatgatga tttcagccgc
    17221 gcggtactgg aagcagaagt tcagatgtat ggcgagctgc gcgatgagct gcgggtgacg
    17281 gtttctttgt ggcagggtga aacgcaggtc gccagcggca ccgcgccttt cggcggtgaa
    17341 attatcgatg agcgtggtgg ttatgccgat cgcgtcacac tacgtctgaa cgtcgaaaac
    17401 ccgaaactgt ggagcgccga aatcccgaat ctctatcgtg cggtggttga actgcacacc
    17461 gccgacggca cgctgattga agcagaagcc agcgatgtcg gtttccgcga ggtgcggatt
    17521 gaaaatggtc tgctgctgct gaacggcaag ccgttgctga ttcgcggcgt taaccgtcac
    17581 gagcatcatc ctctgcatgg tcaggtcatg gatgagcaga cgatggtgca ggatatcctg
    17641 ctgatgaagc agaacaactt taacgccgtg cgctgttcgc attatccgaa ccatccgctg
    17701 tggtacacgc tgtgcgaccg ctacggcctg tatgtggtag atgaagccaa cattgaaacc
    17761 cacggcatgg tgccaatgaa tcgtctgacc gatgatccgc gctggctacc ggcgatgagc
    17821 gaacgcgtaa cgcgaatggt gcagcgcgat cgtaatcacc cgagtgtgat catctggtcg
    17881 ctgggaaatg agtcaggcca cggcgctaat cacgacgcac tctatcgctg gatcaaatct
    17941 gtcgatccat cccgcccggt gcagtatgaa ggcggcggag ccgacaccac ggccaccgat
    18001 attatttgcc cgatgtacgc gcgcgtggat gaagaccagc ccttcccggc tgtgccgaaa
    18061 tggtccatca aaaaatggct ttcgctacct ggagagacgc gcccgctgat cctttgcgaa
    18121 tacgcccacg cgatgggtaa cagtcttggc ggcttcgcta aatactggca ggcgtttcgt
    18181 cagtaccccc gtttacaggg cggcttcgtc tgggactggg tggatcagtc gctgattaaa
    18241 tatgatgaaa acggcaaccc gtggtcggct tacggcggtg attttggcga tacgccgaac
    18301 gatcgccagt tctgtatgaa cggtctggtc tttgccgacc gcacgccgca tccagcgctg
    18361 acggaagcaa aacaccagca gcagtttttc cagttccgtt tatccgggca aaccatcgaa
    18421 gtgaccagcg aatacctgtt ccgtcatagc gataacgagc tcctgcactg gatggtggcg
    18481 ctggatggta agccgctggc aagcggtgaa gtgcctctgg atgtcgctcc acaaggtaaa
    18541 cagttgattg aactgcctga actaccgcag ccggagagcg ccgggcaact ctggctcaca
    18601 gtacgcgtag tgcaaccgaa cgcgaccgca tggtcagaag ccggacacat cagctcctgg
    18661 cagcagtggc gtctggcgga aaacctcagc gtgacactcc ccgccgcgtc ccacgccatc
    18721 ccgcatctga ccaccagcga aatggatttt tgcatcgagc tgggtaataa gcgttggcaa
    18781 tttaaccgcc agtcaggctt tctttcacag atgtggattg gcgataaaaa acaactgctg
    18841 acgccgctgc gcgatcagtt cacccgcgcg ccgctggata acgacattgg cgtaagtgaa
    18901 gcgacccgca ttgacccgaa cgcctgggtc gaacgctgga aggtggcggg ccattaccag
    18961 gccgaagcgg cgttgttgca gtgctcggca gatacacttg ccgacgcggt gctgattacg
    19021 accgctcacg cgtggcagca tcaggggaaa accttattta tcagccggaa aacctaccgg
    19081 attgatggta gtggtcaaat ggcgattacc gttgatgttg aagtggcgag cgatacaccg
    19141 catccggcgc ggattggcct gaactgccag ctggcgcagg tagcagagcg ggtaaactgg
    19201 ctcggattag ggccgcaaga aaactatccc gaccgcctta ctgccgcctg ttttgaccgc
    19261 tgggatctgc cattgtcaga catgtatacc ccgtacgtct tcccgagcga aaacggtctg
    19321 cgctgcggga cgcgcgaatt gaattatggc ccacaccagt ggcgcggcga cttccagttc
    19381 aacatcagcc gctacagtca acagcaactg atggaaacca gccatcgcca tctgctgcac
    19441 gcggaagaag gcacatggct gaatatcgac ggtttccata tggggattgg tggcgacgac
    19501 tcctggagcc cgtcagtgtc ggcggaattc cagctgagcg ccggtcgcta ccattaccag
    19561 ttggtctggt gtcaaaaata ataataaccg ggcaggccat gtctgcccgt atttcgcgta
    19621 aggaaatcca ttatgtacta tttaaaaaac acaaactttt ggatgttcgg tttattcttt
    19681 ttcttttact tttttatcat gggagcctac ttcccgtttt tcccgatttg gctacatgac
    19741 atcaaccata tcagcaaaag tgatacgggt attatttttg ccgctatttc tctgttctcg
    19801 ctattattcc aaccgctgtt tggtctgctt tctgacaaac tcgggctgcg caaatacctg
    19861 ctgtggatta ttaccggcat gttagtgatg tttgcgccgt tctttatttt tatcttcggg
    19921 ccactgttac aatacaacat tttagtagga tcgattgttg gtggtattta tctaggcttt
    19981 tgttttaacg ccggtgcgcc agcagtagag gcatttattg agaaagtcag ccgtcgcagt
    20041 aatttcgaat ttggtcgcgc gcggatgttt ggctgtgttg gctgggcgct gtgtgcctcg
    20101 attgtcggca tcatgttcac catcaataat cagtttgttt tctggctggg ttctggctgt
    20161 gcactcatcc tcgccgtttt actctttttc gccaaaacgg atgcgccctc ttccgccacg
    20221 gttgccaatg cggtaggtgc caaccattcg gcatttagcc ttaagctggc gctggaactg
    20281 ttcagacagc caaaactgtg gtttttgtca ctgtatgtta ttggcgtttc ctgcacctac
    20341 gatgtttttg accaacagtt tgctaatttc tttacttcgt tctttgctac cggtgaacag
    20401 ggtacgcggg tatttggcta cgtaacgaca atgggcgaat tacttaacgc ctcgattatg
    20461 ttctttgcgc cactgatcat taatcgcatc ggtgggaaaa acgccctgct gctggctggc
    20521 actattatgt ctgtacgtat tattggctca tcgttcgcca cctcagcgct ggaagtggtt
    20581 attctgaaaa cgctgcatat gtttgaagta ccgttcctgc tggtgggctg ctttaaatat
    20641 attaccagcc agtttgaagt gcgtttttca gcgacgattt atctggtctg tttctgcttc
    20701 tttaagcaac tggcgatgat ttttatgtct gtactggcgg gcaatatgta tgaaagcatc
    20761 ggtttccagg gcgcttatct ggtgctgggt ctggtggcgc tgggcttcac cttaatttcc
    20821 gtgttcacgc ttagcggccc cggcccgctt tctctactgc gtcgtcaggt gaatgaagtc
    20881 gcttaagcaa tcaatgtcgg atgcggcgcg agcgccttat ccgaccaaca tatcaggacg
    20941 gaatgatcgc aatgaacatg tcgatgacag aaagaataaa agcaggcaag ctatttaccg
    21001 atatgtgcga aggcttaccg gaaaaaagac ttcgtgggaa aacgttaatg tatgagttta
    21061 atcactcgca tccatcagaa gttgaaaaaa gagaaagcct gattaaagaa atgtttgcca
    21121 cggtagggga aaacgcctgg atagaaccac ctgtctattt ctcttacggt tccaacatcc
    21181 atataggccg caatttttat gcaaatttca atttaaccat tgtcgacgac tacacggtaa
    21241 cgatcggtga taacgtattg attgcaccca atgttactct ttccgttacg ggacaccctg
    21301 tacaccatga attgagaaaa aacggtgaga tgtactcttt tccgataacg attggcaata
    21361 acgtctggat cggaagtcat gtggttatta atccaggcgt caccatcggg gataattctg
    21421 ttattggcgc gggtagtgtc gtcataaaag acattccacc aaacgtcgta gctgctggcg
    21481 ttccttgccg ggttattcgc gaaataaacg accgggataa gcaatattat ttcagagatt
    21541 acaaagttga atcgtcagtt taaattataa aaattgcctg atacgcttcg cttatcaggc
    21601 ctacaaattc agtgatctac gtaggccgca tccggcgtga acaaagcgca gaaacaagag
    21661 tcgcatcatg cctctttgac ccacagctgc ggaaaacgtg ctggtgcaaa acgcagggtt
    21721 ataatcatca gcccaacgac acacagcgca tgaaacgccc agtccatcag gtaattgccg
    21781 ctgatactac gcagcacacc agaaaaccaa ggggcaagcc cggcgatgat aaaaccgatc
    21841 ccctgcataa acgccaccag cttgccagca atagctggtt gcgcagagtg atcgagcgcc
    21901 agcagcaaac agagcggaaa cgcgccgccc agacctaacc cacacaccat cgcccacaat
    21961 accggcaatt gcagcggcag ccagataaag ccgcagaacc ccaccagttg taacaccagc
    22021 gccagcatta acagtttgcg ccgatcctga tggcgagcca tagcaggcat cagcaaagct
    22081 cctgcggctt gcccaagcgt catcaatgcc agtaaggaac cgctgtactg cgcgctggca
    22141 ccaatctcaa tatagaaagc gggtaaccag gcaatcaggc tggcgtaacc gccgttaatc
    22201 agaccgaagt aaacacccag cgtccacgcg cggggagtga ataccacgcg aaccggagtg
    22261 gttgttgtct tgtgggaaga ggcgacctcg cgggcgcttt gccaccacca ggcaaagagc
    22321 gcaacaacgg caggcagcgc ccaccaggcg agtgtttgat accaggtttc gctatgttga
    22381 actaaccagg gcgttatggc ggcaccaagt ccaccgccgc ccatcagagc cgcagaccac
    22441 agccccatca ccagtggcgt gcgttgctga aaccgccgtt taatcactga aggcatcacc
    22501 gcctgaatga taccgatccc caccccacca agcagtgcgc tgctaagcag cagcacactt
    22561 tgggggtaaa gctcacgcat caatgcaccg acggcaatca gcaacagact gatggcgacg
    22621 ctgcgacgtt cgctgacatg ctgatgaagc cagcttccgg ccagcgccag cccgcccatg
    22681 gtgaccaccg gcagagcggt caacagggca gccacgctaa agctcattcc gctcgcctgg
    22741 cgcaattgcg gtagcagtgg accgacggag gtgagcagtg gtcgcatatt aagaccaatc
    22801 agcaccagaa ccagcagcat cgtgaacgtc ttttgatggt tgcgcatggc tgtcagaacg
    22861 gtttggtcgg cagatattta ccatctaagg tgatgaccgc acgttcgcca ccttccgggt
    22921 ccgccacttt cttaacgtcg agtttgaagt taatcgcgct gataatgcca tcgccaaact
    22981 tctcatgaac caacgctttc agggttgtgc cgtacacctg caacatttca tagaaacgat
    23041 acatcgttgg gtcggttgga atacggtcat caatgcagcc acgcagtgga atcatctgca
    23101 acagtagaat ggcgtcttcg tcgagatcca gcttcgcccc gaccaggcgg gcggcgtcgg
    23161 caggaagcgc ctgctgcccc agcaaagccg cggttacaaa ggcttctgcc agaccggtgc
    23221 cgtcggcaat ctcggcaaat gagagatctt ttttagcttt gctgagcaaa atggcatcgg
    23281 caagatcaag acgaatattg cggttaattt gcgactgaat catggtgcat ctcctgatgg
    23341 tttaaaaata aggttacgct gcggtcggtt ggcgtagcgg tatggcacaa acgcgcggat
    23401 tagctgccag tggcacaaac tggcgggttg cgccttcaaa cgctgcgatg ctgccgcttt
    23461 caatgtcgta gacccagccg tgcagggcga tccgcccctc ttcgagcgcc aggcgcaccg
    23521 atggatgagt ttgcaaatta gccaactgag caatgacgtt ttcacgtacc atcgccgcag
    23581 cttttgacgg taaatcggaa tgcgggcgcg cctcattaac gacgcgggct gaatcggcat
    23641 aacgcagcca gtgggagacg gcaggcatat ggtccatgca ctgacagctg gcaatggcgg
    23701 tcatcgcgcc acagttggaa tgaccacaaa tcacaatgtc agatacccga agcgcagcga
    23761 cggcatactc caccgaagca gaaacgccac cgggttccgg cccgtaggaa gggacgatat
    23821 tgcccgcgtt gcgaataacg aacagatcgc caggctcacg ttgcgtcacc agctcaggga
    23881 ccagacggct gtcggagcag gagataaaaa gtgtgcgcgg gctttgctgt gtcgccagct
    23941 gtttaaacaa ggcttcccgc ttcggaaatg cctcgcgctg gaatttaagg aatccatcaa
    24001 taatctcttt caccgttaac ctctgtctgt ctctggaatg agaggcagac tactcgccga
    24061 ttgtcataag gtaaaagtct catttatgat gagttctatt ggatttactt ataggttggc
    24121 gaatgctctc tcgacatatc aattactttc ttgccgtggc tgaacatggc agcttcaccc
    24181 gtgccgccag tgcgttgcac gtctcccagc ctgcgctttc ccagcagatt cgccagttag
    24241 aggagagttt aggcgtgccg ctgtttgacc gtagcgggcg aacgattcgt ctcactgatg
    24301 caggagaagt ctggcgacag tacgccagcc gggcgttaca ggaactgggg gcgggtaaac
    24361 gggcgattca tgatgttgcc gatctgacgc gaggatcgct gcgtatcgcc gtcactccca
    24421 cctttacaag ctactttatc ggccctttaa tggcggattt ctatgcgcgc taccccggca
    24481 tcacgctcca gctacaggaa atgtcgcagg agaaaatcga agatctgctt tgtcgcgacg
    24541 agctggacgt tgggattgcc ttcgcgcctg tgcattcgcc ggagctggag gcaattcctt
    24601 tactgacaga aagtttagcg ttagtcgtgg cgcaacatca tccgctggct gcctgtgaac
    24661 aggtggcgtt gagtcgcttg catgatgaaa aactggtcct gctcagcgcg gaatttgcca
    24721 ccagagagca aattgaccac tactgcgaga aagcggggct acatccacag gtggtcattg
    24781 aggcgaactc aattagcgcg gttctggagc tgattcgccg cacttccctt tccacattgt
    24841 taccagcagc gattgccaca caacatgacg ggcttaaagc gatttctctt gccccgccac
    24901 tactggagag aacggcggtt ttgttgcggc ggaaaaatag ctggcagaca gccgccgcga
    24961 aggcattttt gcacatggcg ttggaggaat gtgcggatgt tggcgagaat gaatcacggt
    25021 agccactgac acaggtcagt ggctcttcaa cacagaggaa attaccgttt gtaatcgatg
    25081 gcttctggct gctccagata tacggtggtt tgtgccggtt gtgtactggc aatcaccttg
    25141 ccgccacgta ccgaataacg taccggaacc tgacggcgca gcgcatcaaa tccattttca
    25201 gccggcagga taatcaggtt tgcgctgttt ccggcggcaa tgccgtaatc ctgcaaattc
    25261 aatgttctgg cactgtggtg ggtgattaaa ttcaggccat cgttaatctg cccgtagccc
    25321 atcaactggc aaacatgcag ccccatatgc agcacttgca gcatattcgc cgttcccagc
    25381 ggataccacg gatcgaagac atcatcgtga ccaaagcaga cgttaatgcc ggactccagc
    25441 atctctttaa cgcgcgtgat gccgcgacgt tttggatacg tatcgaaacg tccttgcaga
    25501 tgaatattga ccagcgggtt ggcgacaaag ttaataccgg acattttcag caagcggaac
    25561 aggcgtgagg tatacgcccc gttataggag tgcattgccg tggtgtggct ggcggtgact
    25621 cgcgcgccca tgccttcacg gtgcgccagg gcagcaacgg tttcgacaaa gcgcgactgc
    25681 tcgtcatcga tctcatcaca gtgaacgtcg atgagacggt cgtatttttg cgccagggcg
    25741 aaggttttat gcagcgactc cacgccgtat tcacgggtaa attcaaaatg cggaatcgcc
    25801 cccactacat ctgcccctaa gcgtaacgcc tcttccagca acgcttcacc gttgggatac
    25861 gacaaaatcc cttcctgagg gaaggcgaca atttgcagat caatccacgg cgcgacttcc
    25921 tgcttcactt ccagcattgc tttcagcgca gttagcgttg catccgaaac atcgacatgg
    25981 gtacgcacat gctgaatgcc gttggcaatc tgccatttca gcgtttgcca ggcgcgttgt
    26041 ttcacatcgt catgggttaa taacgctttg cgctcggccc agcgttcaat gccttcaaac
    26101 agcgtgccgg actgattcca gttcggttgt ccggcggttt gcgtggtgtc caggtgaata
    26161 tgcggctcca caaacggcgg tataactaaa ccttgttcgg catccaggct gttttcagtt
    26221 atgggcatca cgccggattg cgcatcaatg gcgctgattt ttccgtcctg cagatgaatc
    26281 tgccacagcc cctctttgcc tggtaaccgg gcgttaataa ttgtttgtaa agcgttattc
    26341 gacactgtta acctccacat gcgtcattgc tgctgtcgtt ttacgattca aaatcgggtt
    26401 aaggatcaga tagctcagcg cgccacctaa taccgcgttg accggaacaa ttcccggtaa
    26461 ccagtggcct gcggcaatcc ccagcgcgac cgccagaatc gccacccaat tgacactcat
    26521 catacgcgtg gtcgcaaagt gctcatagcg gcgacggttc atcagatagt cggcgatgat
    26581 cacgccccct accggaggaa tagctgccga aaggaaggtc aaccagccga caaaattgtt
    26641 atacagccat aatgcgcaga ccgtaccgat aataccgttg attaccgaaa gggttttgct
    26701 cgacataccg gtaatgttgg cgaaacctaa acccgacgca tagagtgcgt tatcgttggt
    26761 ggtccagata ttcagcccca gcaccacaat cgcaggcagc agcaggccct gagcaatcat
    26821 cacatcagag atatccgcca tgcccagtgc cgcagcgccc gctgcaccga aaataaacat
    26881 caacgagttg ccgaggaaaa aggccaccat cgccaccagc accgccagtt tggcattgcg
    26941 accaaaccgg acaaagtcag cggtgagcgt acccgcactg ataaatgacc ccacaaccag
    27001 cgccagcgcg acattgaaat ctaacggttg tgcgggaacg accgctttta atgcgtccag
    27061 gccgcccatg ccgttaacag ccagccacac ggaataaccg cccaggcagg cgatagccgg
    27121 aaccgcaatc accgaaagaa ccgtcagcgc cgaaatgcca aaaaagacgg tgacggtcat
    27181 cagtaaaccg gaaacggcaa tcagcaaatt aatatccagc ccggttgcct tacccaccgg
    27241 aatggcaaac atcgccacac cgacgccaaa ccagccaacc tgagttccgc ccagtagcag
    27301 tgaaggcagc catgagcctt taacaccaaa cgagaagcga gcaagaagat gagtggtcag
    27361 gccggttttt gcgccaatgt aaccgagaaa tgaagtgtaa ataccgagga gaagattacc
    27421 gatgagaact gcgaggaaga aatcatgata gctaagaccg gttccgagag tgccgccggt
    27481 ccacatactg gcggaaaaga aggttaatcc cagcatgacg aacgtcaatg ccaatacccc
    27541 tttccgcgcc gactgcggga ctggcccctg gctaaagttg ttatcttgcg acacgaaatt
    27601 cccccttttt gctgtttgaa acccaaaaaa tccgccgcat tctattcatc tgaagataaa
    27661 aagcaatcgt tttcgtgggg aaatatattt tttatatgaa tgagtgcaaa aaggtggggg
    27721 aaaaattatc ggtgtaaaaa cagtgggtag tg
//
LOCUS       DAPGWB010000056        26289 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.056, whole genome shotgun sequence.
ACCESSION   DAPGWB010000056 DAPGWB010000000
VERSION     DAPGWB010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 26289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26289
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.056"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..217
                     /locus_tag="RHX79_002234"
     CDS             <1..217
                     /locus_tag="RHX79_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197399.1"
                     /translation="VFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILFKMRE
                     DAPPLNLTEEITPTYPTKANYLIHPVR"
     gene            complement(294..536)
                     /locus_tag="RHX79_002235"
     CDS             complement(294..536)
                     /locus_tag="RHX79_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdY family protein"
                     /protein_id="HDV2197400.1"
                     /translation="MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYY
                     FTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR"
     gene            889..1809
                     /gene="lpxP"
                     /locus_tag="RHX79_002236"
     CDS             889..1809
                     /gene="lpxP"
                     /locus_tag="RHX79_002236"
                     /EC_number="2.3.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311285.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) palmitoleoyltransferase"
                     /protein_id="HDV2197401.1"
                     /translation="MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRI
                     GAMARPFLKRRESIARKNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDS
                     RVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQL
                     MEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVEN
                     VATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKII
                     EKEIMRAPEQYLWIHRRFKTRPVGESSLYI"
     gene            2165..2236
                     /gene="ypdK"
                     /locus_tag="RHX79_002237"
     CDS             2165..2236
                     /gene="ypdK"
                     /locus_tag="RHX79_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_077777854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YpdK"
                     /protein_id="HDV2197402.1"
                     /translation="MKYFFMGISFMVIVWAGTFALMI"
     gene            complement(2301..3539)
                     /gene="alaC"
                     /locus_tag="RHX79_002238"
     CDS             complement(2301..3539)
                     /gene="alaC"
                     /locus_tag="RHX79_002238"
                     /EC_number="2.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase"
                     /protein_id="HDV2197403.1"
                     /translation="MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG
                     NPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAI
                     VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE
                     LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY
                     DGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG
                     TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKI
                     PEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKA
                     MFRADGLLPASSKHIHENAE"
     gene            3916..5613
                     /gene="ypdA"
                     /locus_tag="RHX79_002239"
     CDS             3916..5613
                     /gene="ypdA"
                     /locus_tag="RHX79_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     YpdA"
                     /protein_id="HDV2197404.1"
                     /translation="MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKE
                     LLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRY
                     LIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWA
                     PTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLP
                     LFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQ
                     AMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAV
                     GLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR
                     QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC
                     CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV
                     EANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYIPNQRTPVASQATLLL"
     gene            5628..6362
                     /gene="ypdB"
                     /locus_tag="RHX79_002240"
     CDS             5628..6362
                     /gene="ypdB"
                     /locus_tag="RHX79_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator YpdB"
                     /protein_id="HDV2197405.1"
                     /translation="MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH
                     NRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKP
                     YQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEA
                     HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI
                     LRLKDLDFEVPVSRSKVKEFRQLMHL"
     gene            6375..7232
                     /locus_tag="RHX79_002241"
     CDS             6375..7232
                     /locus_tag="RHX79_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2197406.1"
                     /translation="MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSL
                     CIDFPRLDIVLRGEYGNLLEAKQQRMVEGEMLFIPARAANLPINNKPVMLLSLVFAPT
                     WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL
                     LHLCRNVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLF
                     AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP
                     GEYSARFQG"
     gene            complement(7235..9730)
                     /gene="ptsP"
                     /locus_tag="RHX79_002242"
     CDS             complement(7235..9730)
                     /gene="ptsP"
                     /locus_tag="RHX79_002242"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HDV2197407.1"
                     /translation="MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEVTFINHRQNAKA
                     DAKSSLALIGTGTLFNDSCSLNISGSDEEQARRVLEEYIQVRFIDSDSVQPTQAELTA
                     HPLPRSLSRLNPDLLYGNVLASGVGVGTLTLLQSDSLDSYRAIPASAQDSTRLEHSLA
                     TLAEQLNQQLRERDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQ
                     VCAKLSASASDYLRERVSDIRDISEQLLHITWPELKPRNNLVLEKPTILVAEDLTPSQ
                     FLSLDLKNLAGMILEKTGRTSHTLILARASAIPVLSGLPLDAIARYAGQPAVLDAQCG
                     VLAINPNDAVSGYYQVAQTLADKCQKQQAQAAAQLAYSRDNKRIDIAANIGTALEAPG
                     AFANGAEGVGLFRTEMLYMDRDSAPDEQEQFEAYQQVLLAAGDKPIIFRTMDIGGDKS
                     IPYLNIPQEENPFLGYRAVRIYPEFAGLFRTQLRAILRAASFGNAQLMIPMVHSLDQI
                     LWVKGEIQKAIVELKRDGLRHAETITLGIMVEVPSVCYIIDHFCDEVDFFSIGSNDMT
                     QYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTTAHQRGKWVGICGELGGESRYLPLL
                     LGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQACECRSAQEIEALLTAFTPEED
                     VRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEHPFELEEDVWQREEIVTTGVG
                     FGVAIPHTKSQWIRHSSISIARLAKPIDWQSEMGEVELVIMLTLGANEGMNHVKVFSQ
                     LARKLVNKNFRQSLFAAQDAQSILTLLETELTF"
     gene            complement(9755..10792)
                     /gene="ypdE"
                     /locus_tag="RHX79_002243"
     CDS             complement(9755..10792)
                     /gene="ypdE"
                     /locus_tag="RHX79_002243"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HDV2197408.1"
                     /translation="MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGS
                     VLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTR
                     EECKIPGLLDGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRV
                     MGKAFDDRLGCYLLVTLLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAI
                     VLDTACWAKNFDYSAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQAD
                     MFSNGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDILQMQQLLSALIQRLT
                     RETVVQLTDFR"
     gene            complement(10792..11877)
                     /gene="ypdF"
                     /locus_tag="RHX79_002244"
     CDS             complement(10792..11877)
                     /gene="ypdF"
                     /locus_tag="RHX79_002244"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HDV2197409.1"
                     /translation="MTLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGSGYVVISR
                     ESAHILVDSRYYVEVEARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSW
                     ETAHRWQSELNAKLVSATPDVLRQIKTPEEVEIIRLACGIADRGAEHIRRFIQAGMSE
                     REIAAELEWFMRQQGAEKASFDTIVASGWRGALPHGKASDKIVAAGEFVTLDFGALYQ
                     GYCSDMTRTLLVNGEGVSAESHPLFDVYQIVLQAQLAAISAIRPGVRCQQIDDAARRV
                     ITEAGFGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRI
                     EDVVLVTPQGAEVLYAMPKTVLLTGEA"
     gene            complement(11892..13139)
                     /locus_tag="RHX79_002245"
     CDS             complement(11892..13139)
                     /locus_tag="RHX79_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HDV2197410.1"
                     /translation="MAIKKRSATVVPGASGAAAAVKNPQASKSSFWGELPQHVMSGIS
                     RMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSF
                     GGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPV
                     PSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITP
                     FGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLP
                     VTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFA
                     LESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVI
                     TALMVVFLRLMMFRKGKLLIDSL"
     gene            complement(13161..13487)
                     /locus_tag="RHX79_002246"
     CDS             complement(13161..13487)
                     /locus_tag="RHX79_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIB"
                     /protein_id="HDV2197411.1"
                     /translation="MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGAD
                     GIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAVGIIKEIEEM
                     IASEQQ"
     gene            complement(13706..14671)
                     /gene="glk"
                     /locus_tag="RHX79_002247"
     CDS             complement(13706..14671)
                     /gene="glk"
                     /locus_tag="RHX79_002247"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HDV2197412.1"
                     /translation="MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAV
                     IRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFT
                     AVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGH
                     VDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDI
                     TERALADSCTDCRRALSLFCVIMGRFGGNLALTLGTFGGVYIAGGIVPRFLEFFKASG
                     FRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL"
     gene            14875..16131
                     /locus_tag="RHX79_002248"
     CDS             14875..16131
                     /locus_tag="RHX79_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel protein"
                     /protein_id="HDV2197413.1"
                     /translation="MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASALQNLLWQR
                     LPGTLGIAQDSPLWIIGVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPG
                     LIVALILGLAGGVSLGPEHPIMTVNIALAVAIGARLLPRVNRMEWTILASAGTIGALF
                     GTPVAAALIFSQTLNGSSEVPLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQM
                     EMTDILSGAIVAAIAIAAGMVAVWCLPRLHAMMNQMKNPVLVLGIGGFILGILGVIGG
                     PVSLFKGLDEMQQMVANQAFSTSDYFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVA
                     LGLMLHEHVPAVPAAITVSCAILGIVLVVTRDGWLSLFMAAVVVPNTTLLPLLCIVML
                     PAWLLLAGKPMMMVNRPKQQPPHDNV"
     gene            16246..16572
                     /locus_tag="RHX79_002249"
     CDS             16246..16572
                     /locus_tag="RHX79_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HDV2197414.1"
                     /translation="MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYW
                     DGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGR
                     GHGHRH"
     gene            complement(16713..17951)
                     /locus_tag="RHX79_002250"
     CDS             complement(16713..17951)
                     /locus_tag="RHX79_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HDV2197415.1"
                     /translation="MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQA
                     GASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAE
                     IIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGL
                     LLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSS
                     LTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAY
                     LTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLP
                     SFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWV
                     IVVLVVALNIWLLVGTALGL"
     gene            18287..19489
                     /gene="nupC"
                     /locus_tag="RHX79_002251"
     CDS             18287..19489
                     /gene="nupC"
                     /locus_tag="RHX79_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupC"
                     /protein_id="HDV2197416.1"
                     /translation="MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLA
                     WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS
                     ALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK
                     ISRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVD
                     ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTG
                     WFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAST
                     LSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLS
                     ASIAALVL"
     gene            complement(19539..21728)
                     /locus_tag="RHX79_002252"
     CDS             complement(19539..21728)
                     /locus_tag="RHX79_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing phosphodiesterase"
                     /protein_id="HDV2197417.1"
                     /translation="MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFL
                     AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA
                     ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA
                     DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS
                     WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN
                     YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL
                     PNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK
                     LYQLPGSELLLVLSGPETEGRLQHMINILNSRQIHWNNTGLDMGYGAAWGRFDGNQET
                     LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA
                     QPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH
                     PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM
                     YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS
                     ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD"
     gene            complement(21936..22011)
                     /locus_tag="RHX79_002253"
     tRNA            complement(21936..22011)
                     /locus_tag="RHX79_002253"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21976..21978),aa:Ala,seq:ggc)
     gene            complement(22051..22126)
                     /locus_tag="RHX79_002254"
     tRNA            complement(22051..22126)
                     /locus_tag="RHX79_002254"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22091..22093),aa:Ala,seq:ggc)
     gene            22347..22706
                     /locus_tag="RHX79_002255"
     CDS             22347..22706
                     /locus_tag="RHX79_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HDV2197418.1"
                     /translation="MFKERMTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKA
                     RLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLL
                     REGIIGLLQRLGIRDSK"
     gene            22708..23100
                     /locus_tag="RHX79_002256"
     CDS             22708..23100
                     /locus_tag="RHX79_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416898.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HDV2197419.1"
                     /translation="MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGG
                     RARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTD
                     IEQEKVAQFLSREGIRNFLARLDIDESA"
     gene            complement(23152..24567)
                     /gene="gltX"
                     /locus_tag="RHX79_002257"
     CDS             complement(23152..24567)
                     /gene="gltX"
                     /locus_tag="RHX79_002257"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDV2197420.1"
                     /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDT
                     DLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSK
                     ERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPI
                     EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALK
                     APVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEI
                     FTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDT
                     RNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVR
                     DKLAAITDWTAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGK
                     TRSIERINKALDFIAERENQQ"
     gene            24826..24901
                     /locus_tag="RHX79_002258"
     tRNA            24826..24901
                     /locus_tag="RHX79_002258"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24859..24861,aa:Val,seq:tac)
     gene            24946..25021
                     /locus_tag="RHX79_002259"
     tRNA            24946..25021
                     /locus_tag="RHX79_002259"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24979..24981,aa:Val,seq:tac)
     gene            25026..25101
                     /locus_tag="RHX79_002260"
     tRNA            25026..25101
                     /locus_tag="RHX79_002260"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:25059..25061,aa:Lys,seq:ttt)
     gene            25132..25257
                     /locus_tag="RHX79_002261"
     ncRNA           25132..25257
                     /ncRNA_class="other"
                     /locus_tag="RHX79_002261"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(25366..26250)
                     /gene="xapR"
                     /locus_tag="RHX79_002262"
     CDS             complement(25366..26250)
                     /gene="xapR"
                     /locus_tag="RHX79_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator XapR"
                     /protein_id="HDV2197421.1"
                     /translation="MERVYRTDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKE
                     LENQLGTQLFIRHSRSVVLTHAGKILMEESRRLLVNANNVLARVEQIGRGEAGRIELG
                     VVGTAMWGRMRPVMRRFLRENPNVEVLFREKMPAMQMALLERRELDAGIWRMATEPPT
                     GFTSLRLHESAFLVAMPEEHHLSSFSTVPLEALRDEYFVTMPPVYTDWDFLQRVCQQV
                     GFSPVVIREVNEPQTVLAMVSMGIGITLIADSYAQMNWPGVIFRPLKQRIPADLYIVY
                     ETQQVTPAMVKLLAALTQ"
BASE COUNT         6554 a         6980 c         6460 g         6295 t
ORIGIN      
        1 tgtttttgca ttttccattt ctggtggtgt aagtgagagg agctataaag agactgaaaa
       61 aacatcagcg atgacgacca cacactctac aaaacttcag ccatcacagg cgattttgtt
      121 taagatgaga gaagatgcgc caccattaaa cctcacagaa gaaatcacgc ctacttatcc
      181 gacaaaggcg aattatctta ttcatcctgt gcgatagcgt ctgtcacatg gcaggtgaac
      241 aatcatgtct gatgctgatg tgaacacctg cccaaatgag ccatcctgac ccactatcgc
      301 ctgccatacc ccaccataaa gcgaatcatc aagccacaag ccggggcaag aaacataaat
      361 atccccgtca ctagttcatt accgccagtt aaccacatgg tgaagtaata aatgagtgca
      421 gcgaggatca ccatgccgaa gaaagaagag accgccgata ccacgttcag tacctgaccg
      481 atgtagccgc ttacgcagac aatacacagg gcgagaaaca tccataaata aatcatagct
      541 caacctcctg ccgcgctaaa aaacctgtaa cttcagtcac tttaatagta agacaatcct
      601 taacctctgg caatttttgc taagcatcaa tgaaaacagc atgttaaatg caagactgtt
      661 gtgtacggaa aaatatttac tttgcacgat taataatcag tagctgaaag cagtcagcga
      721 gtgataaagt acagataccg cattcatgct cctcgtggtt atgtcctgac tagtctttac
      781 actctttaca ggaaccattg tcgtacatga tggcccaacc aattgagtgt accgctgtcg
      841 acatggaatc ttctgcgata caacaattcg tatctacaga aggtaactat gtttccacaa
      901 tgcaaatttt cccgcgagtt tctacatcct cgctactggc tcacatggtt tgggcttggt
      961 gtactctggc tttgggtaca gcttccttat cctgttctct gctttctcgg cacgcgtatt
     1021 ggcgcaatgg cgcgaccatt cctgaaacgt cgtgaatcta tcgcccgtaa aaacctggaa
     1081 ctttgtttcc cgcagcattc tgcggaagaa cgcgagaaga tgattgccga aaactttcgt
     1141 tcactcggca tggcgctggt agaaaccggc atggcatggt tctggcccga cagtcgcgta
     1201 cgtaaatggt ttgatgttga agggttggat aaccttaaac gcgcacaaat gcaaaatcgc
     1261 ggcgtaatgg ttgtcggcgt ccattttatg tcgctggaac tgggcggccg cgtgatggga
     1321 ctgtgccaac caatgatggc tacctatcgt ccacataata atcagctgat ggaatgggtg
     1381 cagacccgtg ggcgcatgcg ctctaacaaa gcgatgatcg gcagaaataa tctgcgcggc
     1441 attgtcggtg cactgaagaa aggtgaagcg gtatggtttg ctcccgatca ggattatggt
     1501 cgtaaaggca gctccttcgc gccgttcttt gcggtggaaa atgtcgccac aaccaatggc
     1561 acctatgttc tctcccgtct ctctggcgca gccatgttga ccgtaacgat ggtaagaaaa
     1621 gcggattaca gcggatatcg tttgttcatc accccagaga tggaaggcta cccgacagat
     1681 gaaaatcaag ccgctgccta tatgaacaag attatcgaga aagagatcat gcgcgcaccg
     1741 gagcagtacc tctggatcca ccgtcgcttt aaaacgcgcc cggtgggaga atcgtcgttg
     1801 tacatttaac aaactgctct tactctttcc ctcctcaaat cggccataat aacctcatgg
     1861 tttttatggc ttttttctta aggttttttc cttcgctgaa tatctaatta ttaccgtcag
     1921 aaattaaact gtcgccgata tgagacactt gtaagttact aaaagtaaat aagaaaatgt
     1981 ctcttgtctc gtttcagttt taggcgtaca ttagcgccgt ctcgagcagt ttagctcaga
     2041 attctggggt gatgcccacg gtaaaataca gggcttttaa ggtcgctttg cccggtgtca
     2101 actcactgta tcaggtgtaa tgaagtcatt caggcgtaac agtaattacg cggagagatg
     2161 taaagtgaaa tatttcttta tgggcatttc ttttatggtc atcgtttggg ccggtacttt
     2221 tgccctgatg atctaaaagc aaactgtgca atgaaaaaca ggagccatca ggctcctgtt
     2281 tgcatttctg acgacggtgt ttattccgcg ttttcgtgaa tatgtttgct gctggcgggt
     2341 agtaaaccgt cggcacggaa catcgcttta atcccacgaa tcgcctgacg aatacggtcg
     2401 cggttttcaa tcagtgcaaa gcgaacatgc gtatcaccat agtcgccaaa gccaatcccc
     2461 ggcgagacac aaaccttcgc ttcgttaagg agcttcttgg caaattccag cgatcccatg
     2521 gccgcatatg gttccgggat tttcgcccag acatacatcg aagccttcgg catttcaacc
     2581 atccagcccg cttcatgcag ccctttaacc aatacatcac ggcggcgttt gtactgttcg
     2641 gcaatgtcgc gcacgcactg ttgatcgccc tccagcgccg caatcgccgc cacctgcaac
     2701 ggcgtaaagg tgccgtaatc gtgatagctt ttaatacgag ccagggcgct gaccagcgtt
     2761 ttgttgccaa ccataaagcc gatacgccag cccgccatgt tgtagctttt cgacagcgta
     2821 aagaactcga ctgccacatc gcgtgcaccc ggtacctgca tgattgacgg cgctttccag
     2881 ccatcgtaga cgatatcggc ataggccagg tcgtggacca ccagcacatc gtagcgtttc
     2941 gccagcgcca caaccttttc gaagaactcc agctccacgc attgcgcggt tggattcgac
     3001 gggaagccga ggatcatcat cttcggtttc ggataacttt cacgaatggc gcgctccagt
     3061 tcgttgaaga aatcgacacc ttccaccagc ggcactgagc gtacctgcgc cccggcaatc
     3121 accgcgccat aaatatggat cgggtaactt ggattcggca ccagcaccgt gtcaccatga
     3181 tccagcgtcg ccagcatcag atgcgccagg ccctctttcg aaccaatagt gacgatggct
     3241 tctgattccg ggtcgatttc aacgtcgtag cgatcctgat accagcggga aatggcgcga
     3301 cgtaaccgcg gaatgccgcg tgaagtggag taaccatgcg tgtccgggcg ctgggccaca
     3361 gtacataatt tttcgacgat atgcggtgga gtcgcaccgt ccgggttacc catactgaaa
     3421 tcgataatat cttcgccgcg ccgacgcgca gccattttca gttcagcggt aatgttaaaa
     3481 acatagggcg ggagacgatc aatgcgcgta aagcgacgtt cagggcgagt gtcagccata
     3541 atttcctcag attaacgtta gcgcccggac cgtccgagcg acgctgccac gatggtggct
     3601 gttttgaaaa tagcctgatt aatttctgtc tgtccagcgt tttagaacat ttttattaat
     3661 gacgttaaat gaggaactct gctttaaaaa caggaaattt atctgcgcta acaagaaaat
     3721 caccactcat tttattaaca taataatttc aataaattta ctaaccagaa gtgcattatc
     3781 aagagatgca ttgctaatac accatttatc tttcaatccc cttttaaaat tgtggttttt
     3841 cctcaaaaac ggcctgctgg tcatcagcct tcaggttacc tatcatagag gtttaatcct
     3901 tattcagagt cacccgtgca cgaaatattc aacatgctgc tggcggtctt cgatcgggca
     3961 gcgttaatgc ttatctgcct gttctttctc atccgtatcc gcctgtttcg cgaactgttg
     4021 cacaagtcgg cgcactcccc aaaagaattg ctcgccgtta ccgccatttt ctcgctgttc
     4081 gccctgttca gcacctggtc cggcgttccc gtagaaggct cgctggtgaa cgtacgtatt
     4141 atcgcggtga tgtccggcgg gattctgttt ggcccgtggg taggcatcat taccggcgtg
     4201 attgcgggta ttcaccggta tttaattgat atcggcggcg tgacggcgat cccctgcttt
     4261 atcaccagca ttctggcggg ttgtatatca ggctggataa acctgaaaat ccccaaagca
     4321 cagcgctggc gcgtcggtat tctcggcggc atgttgtgtg agacgttgac catgattctg
     4381 gtaattgtct gggcaccaac taccgcgttg gggatcgata tcgtctctaa aatcggcatt
     4441 ccaatgatcc tcggtagcgt ctgtatcggc tttattgtgc ttctggtgca aagcgttgag
     4501 ggcgaaaaag aggccagcgc cgcgcggcag gccaagctgg cgctggatat cgccaacaaa
     4561 acgctgccgc tgtttcgcca tgtcaatagc gagtcattac gcaaggtctg cgaaattatc
     4621 cgcgatgaca ttcacgccga tgcggtggca attaccaata ccgatcatgt gctggcctat
     4681 gttggcgtgg gtgaacataa ctatcagaat ggcgatgact tcattagccc gactacccgt
     4741 caggcgatga attacggaaa aatcatcatt aaaaacaatg atgaagccca ccgcacacca
     4801 gagattcatt ccatgctggt gatcccattg tgggagaaag gcgttgtgac cggaacgctg
     4861 aaaatttact actgccacgc gcatcagatc acctcgtcat tacaggaaat ggcggtcggt
     4921 ctgtcgcaaa tcatctccac ccaactggag gtttcacgcg ccgagcagct acgtgaaatg
     4981 gcaaataagg cagagcttcg cgccctgcaa agcaaaatta atccccattt cctgtttaac
     5041 gctttgaacg ctatttcatc gtcaatccgt ctgaatccgg atactgctcg ccagctgatc
     5101 tttaatctgt cgcgttatct gcgctataac attgaattaa aagacgatga gcaaatcgat
     5161 atcaaaaaag agctgtatca aattaaagac tatattgcca ttgagcaggc ccgctttggc
     5221 gacaagctga cggttatcta tgatattgat gaagaggtga attgctgcat tcccagcctg
     5281 ctgatccagc cgttggtgga gaatgccatt gtccacggta ttcagccttg caaaggtaaa
     5341 ggcgttgtca ccatcagcgt tgcagagtgc ggcaatcggg tacgcattgc ggtgcgggat
     5401 accgggcacg gcatcgatcc aaaggtgatt gagcgggtcg aagcgaatga aatgccgggc
     5461 aataaaattg gcctgctgaa tgtccatcat cgcgtgaagt tattgtatgg cgaggggctg
     5521 catatccgcc gcctggagcc ggggacggaa attgcgtttt acattcctaa ccaacgcacc
     5581 ccagtcgcct cacaggctac gttattgctt tgagccggag tgatattgtg aaagtcatca
     5641 ttgttgaaga cgaattcctg gcacaacagg aactgagctg gctaattaaa gagcacagcc
     5701 agatggagat tgtcggcacc tttgacgacg gtctggacgt gttgaagttt ttgcagcata
     5761 accgcgtcga cgccattttt ctggatatca atattccgtc gctggatggc gtgttgctgg
     5821 cgcaaaacat cagccagttc gcccataaac cgtttattgt gttcatcacc gcgtggaaag
     5881 aacatgcggt agaagcgttt gaactggagg cgtttgacta cattctcaaa ccgtatcagg
     5941 agtcacgtat taccgggatg ctgcaaaaac tggaagcggc ctggcaacaa cagcagacca
     6001 gcagtacgcc tgccgcgacg gtaacgcgtg agaatgacac cattaatctg gtgaaagatg
     6061 agcgaataat cgtcacgcca attaacgata tctattacgc cgaagcgcac gagaaaatga
     6121 cctttgtcta tacgcggcgt gaatcctacg taatgccgat gaacattacc gaattttgca
     6181 gcaaactgcc gccgtcgcat tttttccgct gccatcgctc attttgtgtc aatctgaaca
     6241 aaatacgcga aatcgaaccg tggtttaata acacctacat tctgcgactg aaagatctgg
     6301 attttgaagt gccggtcagc cgcagcaaag tgaaagaatt tcgccagtta atgcatcttt
     6361 aatcgggaac tttcatgaaa gcaccaggct tgcccgccga tcaacaattt ttcgccgatc
     6421 tgttcagcgg cctggtgctt aacccgcaac tactggggcg cgtctggttt gccagccagc
     6481 ctgcctcgtt accggtgggc agtttatgta ttgattttcc ccgtctggat atcgtgctgc
     6541 gcggcgaata cggcaacctg ctggaagcaa agcagcagcg aatggtggaa ggagaaatgc
     6601 tgtttattcc ggcacgcgcg gctaatttac cgatcaacaa caaaccggtg atgctgttaa
     6661 gcctggtgtt cgcaccgacc tggcttgggt tatcgtttta cgatagccgc accacgtcgt
     6721 tgttgcatcc tgctcgccag atccagcttc ccagcctgca acgcggtgaa ggtgaagcga
     6781 tgcttaccgc cctcacccat cttagccgtt cgccgctgga gcagaatatc attcagccac
     6841 tggtgttaag tttgctgcat ctttgccgca acgtggtgaa tatgccgccg ggtaattcgc
     6901 aaccgcgcgg cgattttctc tatcacagca tttgtaactg ggttcaggat aattatgccc
     6961 agccgctcac ccgcgagagc gtggcgcagt tttttaatat cacgcccaat catctgtcaa
     7021 aactgtttgc tcagcatgga acgatgcgtt ttatcgagta tgtgcgttgg gtgcgaatgg
     7081 cgaaggcgag gatgattttg cagaaatatc atctgtcaat tcatgaagtg gcacagcgtt
     7141 gcggttttcc ggatagcgac tatttttgtc gcgttttccg gcgtcagttt ggtctgacgc
     7201 cgggagagta cagcgcccgt tttcagggct aacgtcagaa ggttaattct gtttccagca
     7261 gcgtcaggat actttgtgca tcttgcgcgg caaacaacga ctggcggaag tttttattca
     7321 ccagtttacg cgccagctgc gagaagactt tcacatgatt catcccttcg ttagcaccca
     7381 gcgtcagcat gatcaccagt tcgacttcgc ccatttctga ctgccagtca atcggtttcg
     7441 ccagccgggc aatgctgata ctggaatgac ggatccactg agatttggtg tgcgggatcg
     7501 ctacgccaaa accaacgccg gtggtaacaa tctcttcccg ctgccagaca tcttcttcca
     7561 gctcaaacgg atgttcagtg cgcccgttaa cgccgaggtt gccgcacagg aactggatcg
     7621 cctgctcttt attgctaaaa tcctgatcaa caaagatatt ctccagcgcc agcagtgggc
     7681 gaacgtcttc ttccggcgta aaggcggtga gtaacgcttc aatttcctgc gcactgcggc
     7741 attcacatgc ctgacgcgcc agttcccgac acgcctcgct atccagttga cgaagctggc
     7801 ttttcaccgc cggaatacgc gggctactca tactcagctc atccaggccc agcccaagca
     7861 gtagcggcag ataacggctt tcaccgccca gttcaccgca aatgcctacc catttgcccc
     7921 gctgatgcgc agtggtaact atttgctgca acatgcgcag gaacgatggc gtaatcgggt
     7981 tatacagcgg cgatacgcgc gggttattac gatcgaccgc atacagatac tgggtcatat
     8041 cgttagaacc gatactgaag aaatcgacct catcgcagaa gtggtcgatg atgtaacaca
     8101 ccgacggcac ttccaccatg atacccagag taatcgtctc tgcatgacgc aggccatcgc
     8161 gcttaagctc aacgatcgct ttttggatct cgcccttcac ccataagatc tgatcgaggc
     8221 tgtgaaccat cgggatcatc aactgggcgt tgccaaaact ggcagcgcgc aaaatcgccc
     8281 gtagttgagt gcggaacagg ccagcaaatt ccgggtaaat acgtaccgcg cgatagccga
     8341 ggaacgggtt ctcttcctgg ggaatattca gataaggaat gcttttatcg cctccgatgt
     8401 ccattgtgcg gaagataatc ggcttgtcgc ccgctgccag tagcacctgc tggtaggctt
     8461 caaattgctc ctgctcgtcc ggcgcgctgt cacgatccat atacagcatt tcggtacgga
     8521 acagcccgac gccttccgcg ccgttggcaa acgcgcctgg tgcttccaga gcggtgccaa
     8581 tattcgccgc gatatcaata cgcttgttat cacgggaata ggccagctgc gcggcagcct
     8641 gcgcctgttg tttttggcat ttatccgcca gcgtctgcgc aacctgataa taaccgctca
     8701 ccgcgtcatt cgggttaatc gccagcacgc cgcactgggc gtcaagcacc gccggttgcc
     8761 cggcataacg ggcaatcgca tccagcggca ggccgctcag taccgggatc gccgaggcgc
     8821 gggccagaat cagggtatgc gaggtgcgcc cggttttctc cagaatcatg cccgcaagat
     8881 ttttcaaatc aaggctcaaa aactggcttg gggttaaatc ttcagccacc agaatggtcg
     8941 gtttttccag caccagattg ttgcgcggct tcagttccgg ccaggtgata tgcagcaact
     9001 gttcgctaat atcgcgaatg tcgctaacac gttcgcgcag ataatcgctg gcagaagcag
     9061 aaagcttggc gcaaacctgc tccatattgc tgatgatcgc cgcccccagt ccctgatgct
     9121 gttctgtcat caggcgacgg atattgcctg caaattcatc atcctgaatc agcgacaaat
     9181 gggcgctgag gatagttttg ctttcgccgt cacgctcacg caattgctgg ttcagttgct
     9241 cggcaagcgt tgccaggctg tgctccagcc gggtggaatc ttgcgcactg gcggggattg
     9301 cccgataact gtcgaggctg tcgctttgta acagggtcag cgtacccacg ccgacgccgc
     9361 ttgccagcac attgccgtac agtaaatccg ggttaaggcg gcttaatgaa cgcggcagcg
     9421 gatgcgccgt cagttctgcc tgcgtaggct ggacgctgtc gctgtcgata aagcgcacct
     9481 ggatgtactc ttccagcacg cgccgcgcct gctcttcatc gctgccgcta atgttcaggc
     9541 tgcaactgtc attaaatagg gtgccggtgc caatcagcgc cagcgaactt ttcgcatcgg
     9601 cctttgcgtt ctggcgatgg ttaataaagg tgacttcact ttgccactgg ctgcactgtt
     9661 ctttaagttc ccacgccgga cgagcatgca gaccgttagg caaaggacag agaaattgaa
     9721 tcgttaacat aaccgctccg ggttaatcag gagatcatct gaaatccgtc agttgaacaa
     9781 ccgtctcacg ggtaagacgt tgaataaggg cagataaaag ttgctgcatc tgcaaaatgt
     9841 cgcggcaatc ggcaatcgat gccgcacaat gtccgtggcg cgtcgctggc cccatcacca
     9901 ccgtgggcac gccggtgccg gttaaatgca ccgctccgcc gtccgtgccg ccgttgctga
     9961 acatatccgc ctgcaacggc acgccaattt ctgccgccac ggtttcgatc caggcggtaa
    10021 gttttggcgg cgcaatcagc gacttgtcgc ttaacaccag catcggcccg ttaccaatct
    10081 ggcgatggtt agccgcgcta taatcaaagt ttttcgccca gcaggcggta tcaagcacaa
    10141 tggcgacatc cggcgacacc gcgcgggtgg cagtttgccc gccgcgtaat cccacctctt
    10201 cgctggaact tgccaccagc cacacctccg caggcagttc ggcgtcgtgc agctcacgta
    10261 gtaacgtcac cagcagatag caaccgaggc ggtcatcaaa ggctttcccc atcacccgct
    10321 ggtgagggag aacctgaaaa gttgtatcaa aggtgacgcg atcgcctgga cgaattcccg
    10381 cctgcatcac ttcgtcatag gagcgcgcac caatgtccac gcgcatggcg ctgacgtcat
    10441 tcccctgccg gtcgccgtca agcaggcctg gaattttgca ctcttcacgg gtggtgatgc
    10501 gcaccggctg cagctggcgg gcagccatgc gcacgttgcc aaccggcagc acgtcaatag
    10561 cgccttcgcg ggagatgctg cgcaccataa atcccacttc gtccatatgg gcgcagatca
    10621 tcaccttcgg acctgtcgat tcattgaggc ggatcagcac cgatcccaga ccatcaaatc
    10681 gcacttcttt ttgcaggcga tccgcttctt ccagtaggat ctgccgcact tcctgttccg
    10741 aggaggcgat cgcatctgcc tcgctcaacg cttttaatag cgataaatcc attatgcctc
    10801 tcccgtgagc aacactgttt tcggcatggc gtagagcact tctgcgcctt gcggggtaac
    10861 cagcacaaca tcttcgatgc gcacgccccc ttgccctggc aaataaatcc ccggctccac
    10921 ggtcagcaac atgcctggct gtagcgtcgt ggtgtcccgc ggtgaaaaac gcggatcttc
    10981 atggacttca atgccgatag cgtgaccagt gttatgaccg aaatagtcgc caaatccagc
    11041 ctcggtaatg acccggcgcg cggcgtcgtc aatctgctgg cagcgcacgc cggggcgaat
    11101 tgcagagatt gccgcgagct gtgcctgcag gacaatctga tagacgtcaa acagcgggtg
    11161 agattcggcg ctcacccctt cgccattcac cagcaaggtg cgcgtcatat cagagcagta
    11221 gccctgatac agcgcaccaa aatcgagagt gacaaactcg cccgctgcaa caatcttgtc
    11281 gctggctttg ccgtgcggca gcgccccgcg ccagccgctg gcgacaatgg tgtcaaaaga
    11341 ggctttttct gcgccctgct ggcgcataaa ccactccagt tcagcggcta tctcgcgctc
    11401 gctcatcccc gcctgaataa agcggcgaat atgctccgct ccgcgatcgg caatcccaca
    11461 ggcgaggcgg attatctcca cctcctctgg cgttttgatt tgccgcagca catccggcgt
    11521 ggcgctaacc agtttcgcat tgagttcaga ctgccagcgg tgcgcggttt cccaactcac
    11581 ctgctggccc tcaaaaccga gcgtttgcaa ctgttcatcg gcaatgattt gattgacgat
    11641 agtggtaagc gtgttcgttg cgtcaagcaa atgcagctgg tagccttgcg cacgggcttc
    11701 cacctcaacg taatagcgcg aatccaccag aatgtgcgca ctttcacggc taatcaccac
    11761 ataacctgat ccggtggaga tccccagatg cggctgtttg ttctgccgtg aggagagaag
    11821 cactgcatcc agttgttgcg ccttaagcca gtcgcgcagc gaagcgagta atgtcatctg
    11881 gattttcctt cttacaggct atcgattaac aatttgcctt tacggaacat catcagacgc
    11941 aggaacacca ccatcagcgc agttatgact gcccccagcg cgatccccgc catatagacg
    12001 cccaggttag tgaccagcgg ccatgcccag atagcggact ccgggaacca ttgcactgcg
    12061 cccagccaga cagcggcggt tgagccgaca atagcgccga ccatatacga cggaatggcg
    12121 gtgatggggc tttccagcgc aaacggaatc gcaccctcac tgatccccat aaacgccagg
    12181 aacatggcgg tcttaccctg cggataaagt tgagcgttga acaggcgttt gccggttaaa
    12241 cgacggtcga taatggtcgc cagccccaga ccaatcggcg gaataacgat agcgatagaa
    12301 cgcgcggtaa ccggtaatac gtggtcggtg gtaaagctga aggcaacgaa acctgccgct
    12361 ttgttgattg ggccaccaag gtcgattgcg gtcgccgcgg caatccccat tgcatacatc
    12421 agcgcgccct tctcacctgc ggcagtcagc acggtacgga taccgccgtt gatccagcca
    12481 ccaaatgggg tgatgacata gtacatcgcc agcatgacaa aaatggcgga aagaatcggt
    12541 agcaaaaatg tggttttgaa cgctaacagg aaatccggta actggatttt ctggttcatc
    12601 cacttcacaa ggtaacccgc gacgatagaa ataatcagcg caccaatgaa ggttgacggc
    12661 accggcgaag aggtcgccca ttgcatagtg ctgggatcga agttcagcag ttgcgtcggc
    12721 tgggtagaca tcaagccgcc gataaaacca gccgggaacg ccagtttgcc gccgatagag
    12781 ttcgccacaa aagcggcaaa catcggaata gcaaagccaa acaacacgcc gccgaaggac
    12841 tgcgacagcc aggcaaattt cagtaaggag aggtcgaaac cggagaattt cccgctatta
    12901 agagcatcca tgatgccgat ctcagcagga attttaagcc agctataagc aatcagctgg
    12961 ctgaaagcga ggatcacacc gcccataatt aaggtcggca ccatgcgtga aatccctgac
    13021 atcacatgct gcgggagttc accccagaag ctgcttttag aggcctgcgg attcttaact
    13081 gccgctgccg caccggatgc gccaggcaca acggttgcac tgcgtttttt aatggccata
    13141 acaattatcc ctgtcgaata ttactgttgt tcagaggcaa tcatctcttc gatttctttg
    13201 atgatgccta cagcgttttt aattgcgtcc tgcaaagtga tttcataaac gtcgcgtgat
    13261 tcgaaacgtt cgttatcttc cggggtaact gccacggaat ggatgatgat ggtcgcttcg
    13321 gcgatatcct gcgccgtcag gcgattctgg atgccgtccg cgccctgggt ttcaattttc
    13381 acttcataac cggcttctac cgccgcttct tccagcgcct gagcggccat aaaagtgtga
    13441 gccaggccca tcgggcaggc acataaggca atcagtttct tactcatcgt taattcctcg
    13501 ttcagtgata gttgacgagt gaaattatga acgtgcaaaa caaatcgccg ttaccagaca
    13561 aataatgcat ttactggaga attaatcccg ctgtatggaa gtgtgacgca ggtcggcctt
    13621 gtgaggggac acaaagaaaa attgaattaa ctgtatgatt taaaagatta tcgggagagt
    13681 tacctcccga tataacagga aggatttaca gaatgtgacc taaggtctgg cgtaaatgtg
    13741 caccggaacc gagaagaccc ggattgtcat ggacgatgag atacaccgga atatcatgga
    13801 catattcttt aaagcgccct ttatcttcaa atgcggcacg gaaaccagag gctttgaaga
    13861 actcaaggaa gcgcggcacg ataccgccag caatataaac cccaccaaag gttcccagcg
    13921 ttaatgccag attgccgcca aaacggccca taatgacgca aaacagcgac aacgcacggc
    13981 ggcaatcggt gcagctgtca gccagcgcgc gttcggtaat atcttttggc ttgagatttt
    14041 ctggcaggcg gttgtcggct ttaacaattg cgcgatacaa attcaccagc ccagggccag
    14101 aaagcacgcg ttccgccgaa acatggccaa tttccgcacg caatatttcg aggataatgg
    14161 cctcttcttc actattcggc gcaaaatcaa cgtgaccgcc ttcgcccggc aagcttaccc
    14221 aacgcttatc gacatggacc agatgcgcaa ccccaagccc tgttccggca ccgtaaaccg
    14281 caataggttt accttctacc ggttctgcgc caccaaactg aatcagatgc tcttttttca
    14341 gcatcgggat cgccattgat acagcggtaa aatcgttaat aatttccaga tggctaaaac
    14401 cgagattctt tttcatttcg gcaattgaga acgcccaggt atggttggtc attgccaccc
    14461 agtcaccggt aattgggcaa gcgatggcaa tacagccgtc tttcacctcg accttatgtt
    14521 cttcaagata aacgcgaatg accgcttcga ggctggggta atcaagccct gaataggtct
    14581 tagcctgcga gatttcacca ctggcaatat cacacagagc aagacgtgcg ttggtgccgc
    14641 ccacatcacc gactaatgca tactttgtca ttcttcaact gctccgctaa agtcaaaata
    14701 attctttctc acactgtaaa tacctggggg cataacaaca acgccggaaa ggcaggctcc
    14761 ctgtaaatat cgatctgggt cacacattta ctttatcgtt tcagcaccaa ttgcagcgat
    14821 gcctttttgc aagctgggca aactaagtat ctgaccccgc ataaggaata gaacatgctc
    14881 catccgcgag ccagaaccat gttgttatta tcgctccccg ccgtggcaat tgggattgcg
    14941 tccagtctta ttctgattgt ggtgatgaaa atcgcctcgg cattacagaa tttgctctgg
    15001 caacgactgc cgggaactct ggggatagcc caggattcac ctctctggat catcggtgta
    15061 ttaacgctaa cgggtattgc ggtggggttg gttatccgtt tcagccaggg tcatgccgga
    15121 ccagaccccg cctgtgaacc gctgatcggc gcaccagttc cgccctctgc gctaccagga
    15181 cttatcgtag cattaattct cggtcttgct ggcggcgtca gcctggggcc ggaacatccg
    15241 atcatgaccg tcaatatcgc ccttgcggtt gccattggcg ctcgtctgtt accgcgcgtc
    15301 aaccgaatgg agtggactat tttagcctct gccggaacca tcggcgcgct gtttggtaca
    15361 cctgttgcgg cggcgttgat attttcgcaa accttaaatg gcagtagtga agttccgcta
    15421 tgggatcgtc tttttgcgcc attaatggcg gcagcagctg gtgcacttac taccggatta
    15481 tttttccatc cccatttttc actgcccatt gcgcattacg gacagatgga aatgaccgat
    15541 attctcagcg gtgcaattgt cgcggcgatt gccatcgcag cagggatggt cgccgtatgg
    15601 tgcttaccac ggttgcacgc gatgatgaat caaatgaaaa atccggtgct cgtgctgggt
    15661 attggcggat ttattctcgg tattctgggg gttattggtg gaccagtttc gctgtttaaa
    15721 gggctggatg agatgcagca gatggtggca aatcaggctt tcagcaccag cgattacttt
    15781 ttgctggcgg taattaaact tgccgccctg gtcgttgctg ccgccagtgg ctttcgcggt
    15841 gggcgaatct tcccggcagt gtttgtcggc gtggcattag ggttgatgct gcatgagcac
    15901 gtacccgccg taccagcggc aataaccgtt tcttgcgcta ttctcggcat cgtgctggtg
    15961 gtaacacgcg atggctggtt aagtcttttt atggcggcgg tcgttgtacc caataccaca
    16021 ttgctaccgc tgctctgtat cgtcatgctt ccggcatggc tgttattagc aggtaagccg
    16081 atgatgatgg tcaatcgtcc gaagcaacag ccaccccacg ataacgttta gcaaaaaatg
    16141 ctctccttta tgatttaaga gttatggcga tgatacgggg ctttacctcc ccgtaatatt
    16201 gcgttaacag gccgctgacg gcttcgatcg tgaaggagaa taacaatgtt caggtcactg
    16261 tttctggcgg ccgccctgat ggcatttacc ccgcttgcag caaacgcagg tgaaatcacc
    16321 ctactgccat caatcaaatt acaaattggc gatcgcgatc attacggtaa ttactgggac
    16381 ggtggtcact ggcgcgaccg tgactactgg catcgcaatt atgagtggcg taaaaaccgc
    16441 tggtggcgtc atgataatgg ctatcatcgt ggctgggata agcgtaaagc gtatgagcgt
    16501 ggctatcgtg aaggctggcg cgatcgtgac gatcatcgcg gaaaaggccg cggacatgga
    16561 caccgccatt aaacacattc gccaatggaa cacaatgcct gatgcgacgc tagcgagtct
    16621 tatcaggcct acaaaccggc tctttaacgc gtagggcgga taaggcgttt acgccgcatc
    16681 cgccaatagt gccagatgcg acgctcattc aactacaatc ccagcgccgt ccccaccaac
    16741 aaccagatat tcagcgccac gaccagcact acaatcaccc agcctgtctg ttttacgcgt
    16801 ttgctgttca ccagatcgcc catcaacttg ctgtcactgg tgaaaatcag cagtggaacc
    16861 agcgccaggg cgataccaaa acttaacagc acctgactca taaccagaat ccgtgtcgga
    16921 tctaatccca tcagaatgac aataaatgac ggcaacatgg tgactgtacg acgcacccac
    16981 agcgggatat ggaagcgaat gaatccctgc atcaccacct gccccgccag tgtccccacc
    17041 accgttgagg acagtccggc agcaaccaga cttaacccaa agaccgttgc cgcagcatgg
    17101 cttaacagcg gttgcagcgt cagataagcc tcatcaagat cggcaacacc agtatgacca
    17161 gaaaagtgga acgccgccgc agctgtagcc atcatcgcca gattgacaaa accggcaatc
    17221 gtcatggcga tagccacatc ccatttggtg gcggaataac gttgttgacg cgaaccgcca
    17281 tgtaaatgct gagtgagcga agagtgcaaa taaatcacat gcggcataat cgtcgcccct
    17341 aacacgcctg ctgccaggaa gaccgcttcc gaagtaggta aactcgggat caccattcct
    17401 ttacccagct gcgccaggtt aggctgggaa aaaatcaact cgacaatgta agccgcggca
    17461 acaaacaaca gtaacccacc aatcactttc tccagcggtt tttgcccgcg acgttgcagc
    17521 attaaaatca ggaaagtcgc gatccccgtc agcaccgcgc cctgcaacaa cgaaacacca
    17581 agaatgagtt taaaaccgat cgccgcacca ataaattccg ccaggtcggt tgccatcgca
    17641 ataatttctg cctgaaccca atagaaccac actacgggac gcggatagtg atcacgaatc
    17701 tgctccgcca gatttttacc ggtggcaatc cctagtttgg cagagaggat ctgaatcagc
    17761 atcgccatca ggttggccca aacgacaacc cacagtagct gatagccgaa gctagcaccc
    17821 gcctgaatat tggtcgcaaa gttaccggga tcgatataac caatcgccgc aatgaacgca
    17881 ggtcccatta atgcgagcct catcttgcgc gccgcccgtc cgctgctact ctcaacgcga
    17941 tagttcgtca tcttgtgcct ctaaaacata gcctttgcta tgtttcatgc tatgccaaac
    18001 gagaatgatt atcaaattca tttgaatggg ttgtggtgat ttctttgata gaccaggatt
    18061 atgactacga aaagattgat gacttgaatg ttatggttat gtttaatgtt agcacattta
    18121 cataactttc agcttccata cacaacatag cagaaatgta tgacagatca ctatttttga
    18181 agcttgtcac aggacgtcat tatagtgtgt gtcagatctc gttttcctta accatgttac
    18241 atagaatgtg cacggaaatt taacctgcct catatttgga gcaaatatgg accgcgtcct
    18301 tcattttgta ctggcacttg ccgttgttgc gattctcgca ctgctggtaa gcagcgaccg
    18361 caaaaaaatt cgtatccgtt atgttattca actgcttgtt atcgaagtgt tactggcgtg
    18421 gttcttcctg aactccgacg ttggtttagg cttcgtgaaa ggcttctccg aaatgttcga
    18481 aaaactgctc ggatttgcca acgaagggac taacttcgtc tttggtagca tgaatgatca
    18541 aggcctggca ttcttcttcc tgaaagtgct gtgcccaatc gtctttatct ctgcactgat
    18601 cggtattctc cagcacattc gcgtgttgcc ggttattatc cgcgcaattg gtttcctgct
    18661 ctccaaagtc aacggtatgg gcaaactgga atcctttaac gccgtcagct ccctgattct
    18721 gggtcagtct gaaaacttta ttgcctataa agatatcctc ggcaaaatct cccgtaatcg
    18781 tatgtacacc atggctgcca cggcaatgtc caccgtgtcg atgtccatcg ttggtgcata
    18841 catgaccatg ctggaaccga aatacgtcgt tgctgcgctg gtactgaaca tgttcagcac
    18901 ctttatcgtg ctgtcgctga tcaatcctta ccgtgttgat gccagtgaag aaaacatcca
    18961 gatgtccaac ctgcacgaag gtcagagctt cttcgaaatg ctgggtgaat acattctggc
    19021 aggtttcaaa gttgccatta tcgttgccgc gatgctgatc ggctttatcg ccctgatcgc
    19081 cgcgctgaac gcactgtttg ccaccgttac tggctggttt ggctacagca tctccttcca
    19141 gggcatcctg ggctacatct tctatccgat tgcatgggtg atgggtgttc cttccagtga
    19201 agcactgcaa gtgggcagta tcatggcgac caaactggtt tccaacgagt tcgttgcgat
    19261 gatggatctg cagaaaattg cttccacgct ctctccgcgt gctgaaggca taatctctgt
    19321 gttcctggtt tccttcgcca acttctcttc aatcgggatt atcgcaggtg cagttaaagg
    19381 cctgaatgaa gagcaaggta acgtggtttc tcgcttcggt ctgaaactgg tttacggctc
    19441 taccctggtg agtgtgctgt ctgcgtcaat cgcagcactg gtgctgtaaa accatacata
    19501 aaaaagccgg ggatcattcc ccggcttttt tacgcctgtt aatcagctaa tggctgcggg
    19561 cgaccaatca aatacccttg cagatattgc accccgagct tatgcaatag cgcctgctgc
    19621 tgttgcgtct cgacaaactc cgcgaccaca ctcaatgact tcgctttcgc cagatcggta
    19681 attgatctca caatcatcgc atccagcgta ttcgtgacaa tatctttcac aaagacgcca
    19741 tcaattttga tgatatcagc ctgcaaacgc tttaaccgtt cgtagttggc atatccggtg
    19801 ccaaagtcat caatcgcaat ccggaaacca aacttatgca gctgctcgat gttgtacatg
    19861 ctgctttctg cgttagaaaa cgcctgctcc tcggtgatct caagaatgac cgcctgcggg
    19921 gagatgtgat aacgcttaaa cagacgaata atccgcccgg caatattctt ttgcagcagc
    19981 gtgagcggca ttaaattgac tgaaaagcgc ggtccttttt tgtcgcaagg gtgtgttgcc
    20041 agccacttca acaaggattc cagcacttgc aaatcaaaac gcgcgctaag gttaaactga
    20101 gcaataaggg gcagaaactt atccggggtc ataatgccgc cgtcatattt cagtcgcgcg
    20161 aggatctcat cataaccttc accctctttg ttgcgaattg gctgggcgta gagcagcaaa
    20221 tcaccctgat ctaacgccgt gcgaatggta ttcagcaata gcacctgttt agtggtctgc
    20281 ccggaaacca tctcctctct gctatccagc gccagcacat gatgatgtgc gcaggattgc
    20341 tccgccagcc agcttaactg ccccaacaag ggttgcaggg tttcctgatt tccatcaaaa
    20401 cgcccccagg cagcaccata gcccatatcc agcccggtat tgttccagtg aatttgccga
    20461 ctattcagga tgttaatcat atgctggagt cgcccttccg tttccggccc gctcagcact
    20521 aacagcagtt cactacccgg caattgatac aacttttcgt tttcctgcat caacggcagc
    20581 agcgtacggc aaattgagcg gatacagtga acgcgcatca ttaagccgta atgacgactc
    20641 ataaactcaa gattatcaat gcgcaggcag caaaaactct tgcccgcctc ttgctccggc
    20701 gcttgttcca acgcacgaaa gttgggtagg agcgttaacg gatctgtcag cgcctgcaaa
    20761 tgccagcggc gattaagcca ttcactgcga tgataaatgc gcaccatata gagcaggcaa
    20821 acgctaaagg aaatcagcac cgcaagaata aatgccagcg aatattcggt ttccacccct
    20881 tgcaaaaagt tctggttgta attcagcagg caaagcgttg aaacagccca ggtgagattt
    20941 aaaaacggat agcgaagctt accgaccccg agggtaaaga tgatgaagaa aacgggtacc
    21001 aagtaaccgg caataaagtc gttttcataa ggtgtgcaca acagaagtag cagcacgctt
    21061 aacgctgcca gccagcttaa ggtaaatgcg cgtttctctt tgcccaacga cggagcaata
    21121 tccctgcgcc acaatatctg cgcaaagtgg ggacttacaa tcatgcgagt gagatagtag
    21181 aaaagcatgt tgtaaatcag cacagcggtg aaaaggctta gcaaatcaac gaccgtgaaa
    21241 atggcatccg catcgccgaa aaaggtggat atctttagcg ggaaatcaaa gaagctcccc
    21301 acaagataca tgctgcattt gatgccgatc ggcgtcacca aaccaagcca gaacagacgt
    21361 tgccagacat atcggctggt caatccataa cgccaacgcg tccccagctg ccagcgtaat
    21421 attgcgcagg cacacaacac gacaaacgtc tggctaccga gcatgaccgc agtctgtaaa
    21481 aaagagagat gaaagttcca cagattggtg caaaacatcc cgcataaaac gggaacgaca
    21541 ccgcgccagc caaagataaa caagattgac agcattacgc acagtggcat ccacgccaga
    21601 aagatataac tggaatggat aatggcaagt ggcgaaataa aacgggatag ctgaataagt
    21661 accacggtga gcgtaaacgc tagtgtgaat atcttgatat tttttatcag gttatgctcc
    21721 acaaacatga gtacactact ctcactgatc ggggttttca ggcacacaaa taataagttt
    21781 attcgcatcg cgaagcaaac aggggccagc ctgttgccga tttttcatcc aatgatgctt
    21841 tcaccaggcg gcgctaaccc ggacgtagac tgtattacaa aagcggcaaa aagcagagac
    21901 aaaaaacccc cgctttgcag cgagggttgg aaatttggtg gagctaagcg ggatcgaacc
    21961 gctgacctct tgcatgccat gcaagcgctc tcccagctga gctatagccc cacgatgcgt
    22021 ttacgtacca aatttgctgg gtgcaaaatt tggtggagct aagcgggatc gaaccgctga
    22081 cctcttgcat gccatgcaag cgctctccca gctgagctat agccccgtca cgtaaagctt
    22141 gtcgagttga cgggcggcat catatgaatt ccgcccgaat gtgtcaacgg caaattgcaa
    22201 cgtgtagttt caatcgctga aaaatcaggc aaatgaacaa ttttggaaaa ccgctcgcat
    22261 tcagtagtta ttcatgtcac ggtttcctgt aaagtggtgt tataaaatga actactaata
    22321 gacccacata cattcaggga attgttatgt tcaaggagag gatgacacca gatgaacttg
    22381 ccagactgac cggctatagc cgccagacca ttaataaatg ggtacgcaag gaaggctgga
    22441 caacgtcacc aaaacctggc gtccagggtg gcaaagcccg actggttcac gtcaatgaac
    22501 aggttcgtga atatattcgc aatgctgaac gtccagaagg tcagggagaa gcgcctgccc
    22561 tttctggtga tgcgccgctt gaagtattgc tggtgacact ggcgaaagag atgacgccag
    22621 ttgaacaaaa acagtttaca tccttgcttc tgcgggaagg gattatcgga ttgttacaac
    22681 gcttagggat tcgcgatagc aaataatatg aaaagattac gcaacaaaat gaccaccgaa
    22741 gaactggctg aatgcctcgg tgtggctaaa caaactgtta accgttggat cagagaaaaa
    22801 ggctggaaaa cggaaaaatt tcccggcgtg aaaggcggtc gtgccagact tattctggtc
    22861 gatacgcaag tttgcgagtt tattcagaac acgccagcct tccataacac accaatgttg
    22921 atggaagctg aagagagaat tgctgaatac gctcctggag cacgcgcccc ggcgtatcga
    22981 caaatcatca acgcgataga taatatgaca gacattgagc aggaaaaagt cgcgcaattt
    23041 ttgtcacgtg aaggaattcg caatttcctc gcccgtctcg atattgacga atcagcataa
    23101 ataaaaaacg gcaggatatt atctcctgcc gtttatcttt ttacacgcta attactgctg
    23161 attttcgcgt tcagcaataa aatccagcgc tttgttgata cgctcgatac tgcgggtctt
    23221 accaattgcg tgaacggtaa catccagtgc tggagactgc cccgcaccgg ttacggcgac
    23281 acgcagcggc ataccaactt tacccatacc cacttccagc tcatccgccg tcgcctgaat
    23341 agcgtgatga acgttttcag cggtccagtc agtaatcgcg gccagtttgt cacgaaccac
    23401 ttccagcggc tgacgcgcta ccggacgcag atgttttttc gccgcatcgg catcgaactc
    23461 agcaaaatct tcgtagaaat aacggcagct ctgtgccatc tctttcagcg tcttgcagcg
    23521 ttcgcccagc agtttcacca gatcagccag ctgcgggccg ttacgggtat cgatattttc
    23581 ctgctcaatg tgccactgta agtgagtagc aacatactcc ggcggcagcg cgttaatgta
    23641 gtgatggttc agccacagca gcttgtcggt gttgaacgca ctggcagatt tgctgacggc
    23701 attcaaagtg aagtatttga tcatctcttc acgagtgaag atttcctgat cgccgtggga
    23761 ccagcccaga cgcaccagat agttcagcag tgcttctggc aaataaccgt catcacgata
    23821 ctgcattacg ctgaccgccc cgtgacgttt ggacagtttt ttaccgtcat cgccgttgat
    23881 catagaaacg tgcgcgtaaa ccggcaccgg cgctttcagg gccttaagaa tgttgatctg
    23941 gcgtggcgtg ttgttgatat ggtcttcgcc acggataacg tgggtgattt ccatatccca
    24001 gtcatcgaca accacacaga agttgtaggt tggggaacca tcggtacggc ggataataag
    24061 atcgtccagt tcctggttgc tgaactcgat cggaccacgg atctgatcgt caaaaacaac
    24121 agaaccttcc tgcgggttag caaaacgtac aacgcacggt tcatcatcag catgatgctc
    24181 atggctgtgg cggcagcgac cgtcataacg cggcttctca cctttcgcca tttgctcttc
    24241 gcgcagcgct tccaggcgct ctttagagca atagcattta taagcagtgc cctcttccag
    24301 catctgatcg atcaccgcgt tgtagcgatc aaaacgtttg gtctggtagt acggaccttc
    24361 atcccactcc aggctcagcc agttcatgcc atccataatg gcttcgatag cttccggcgt
    24421 ggaacgctca agatcggtgt cttcaatacg cagcacgaac tcaccgccgt ggttacgtgc
    24481 aaaaagccag gagtaaagag cagtacgcgc gccgccaacg tgcagatagc ctgttgggct
    24541 tggcgcgaag cgagttttga ttttcatgaa atggccttac gtttagaaag atgccgacaa
    24601 ccggcaaatc ctggaaaaat tgagtgggcg atattctatc actcccgcct gattcctcaa
    24661 tgtagttcgg gtttctacct tacgcattat tgttttcgtt gacaaattgc gcaacacggt
    24721 ctgttttgcg atcatcttgc ttaaatttac gacgaacgaa caatttcttt agaaaatgcg
    24781 ttgactcatt ttgaactctc cctataatgc gactccacac agcgggggtg attagctcag
    24841 ctgggagagc acctccctta caaggagggg gtcggcggtt cgatcccgtc atcacccacc
    24901 aactacttta tgtagtctcc gccgtgtagc aagaaattga gaagtgggtg attagctcag
    24961 ctgggagagc acctccctta caaggagggg gtcggcggtt cgatcccgtc atcacccacc
    25021 acttcgggtc gttagctcag ttggtagagc agttgacttt taatcaattg gtcgcaggtt
    25081 cgaatcctgc acgacccacc aatgtaaaaa agcgccctaa aggcgctttt ttgctatctg
    25141 cgatactcaa agattcgaac ctgcagcagg tttgagttga gcgcagcgaa acaacggagc
    25201 cgctcgcggc gacggcccga agggcgagcg aagcgagtca tcctgcacga cccaccaatg
    25261 taaaaaagcg ccctaaaggc gcttttttgc tatctgcgat ttgcgaaatt gcctgatgcg
    25321 cttcacttag cagacgacta tttccggcaa ttcctgtctc ctcacctact gtgtcaatgc
    25381 agccaacagc ttaaccatcg cgggcgtcac ctgctgtgtt tcataaacaa tatataaatc
    25441 tgcagggatg cgctgtttga gcggacggaa aatgacacct ggccagttca tttgtgcgta
    25501 gctgtccgct atcaatgtga taccaatacc catactgacc atggcgagta ccgtttgcgg
    25561 ttcattaact tcgcgaataa caaccggtga aaatcccacc tgctggcaaa ctcgctgcaa
    25621 aaaatcccag tcagtgtaca cgggcggcat tgtaacaaaa tactcgtcac gtagcgcttc
    25681 cagcggaacg gtggaaaatg atgagagatg atgctcttca ggcatcgcca ccagaaacgc
    25741 cgattcatgc aaccgtaagc tggtaaaacc tgtcggtggt tctgtcgcca ttcgccagat
    25801 cccggcatcg agttcacgtc gttccagcag ggccatttgc atcgcgggca tcttttcgcg
    25861 aaaaagaact tcaacgttag gattttccct gaggaatcgc cgcataaccg ggcgcatccg
    25921 tccccacata gccgttccca ctacgccgag ttcaatccgc cctgcttctc cccgacctat
    25981 ttgttcaacc cgagccaata cattattagc attcaccagc aatcgacgcg attcttccat
    26041 caagattttg cccgcgtgtg tcagtacgac gctgcgcgaa tggcgaataa aaagctgcgt
    26101 gccgagttga ttttccagct ctttaatatg aatactgagc ggaggctgag acatatttaa
    26161 acgcgctgct gcgcggccaa aatgcaactc ttccgctacg gcaagaaaat aacggagcaa
    26221 cttaagatct gttctgtata cgcgttccat aattaagtgc tccatataat aaatacatcg
    26281 tattaaatt
//
LOCUS       DAPGWB010000057        26060 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.057, whole genome shotgun sequence.
ACCESSION   DAPGWB010000057 DAPGWB010000000
VERSION     DAPGWB010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 26060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26060
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.057"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            201..395
                     /gene="bfd"
                     /locus_tag="RHX79_002263"
     CDS             201..395
                     /gene="bfd"
                     /locus_tag="RHX79_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HDV2197422.1"
                     /translation="MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIR
                     AAREVMQDELMQMPEFKEIA"
     gene            468..944
                     /gene="bfr"
                     /locus_tag="RHX79_002264"
     CDS             468..944
                     /gene="bfr"
                     /locus_tag="RHX79_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HDV2197423.1"
                     /translation="MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLMRLNDVE
                     YHESIDEMKHADKYIERILFLEGIPNLQDLGKLGIGEDVEEMLQSDLRLELEGAKDLR
                     EAIAYADSVHDYVSRDMMIEILADEEGHIDWLETELDLIGKIGLQNYLQSQIKVKD"
     gene            complement(941..1408)
                     /locus_tag="RHX79_002265"
     CDS             complement(941..1408)
                     /locus_tag="RHX79_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDV2197424.1"
                     /translation="MDATLPFLILYACLSVLLFLWDAKHGLLPDRFTCPLLWSGLLFS
                     QVCNPDGLADALWGAIIGYGTFAVIYWGYRILRHKEGLGYGDVKFLAALGAWHTWTFL
                     PRLVFLAASFACGAVVVGLLMRGKESLKNPLPFGPFLAAAGFVVGWDSLLAGR"
     gene            1787..2098
                     /gene="rpsJ"
                     /locus_tag="RHX79_002266"
     CDS             1787..2098
                     /gene="rpsJ"
                     /locus_tag="RHX79_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDV2197425.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            2131..2760
                     /gene="rplC"
                     /locus_tag="RHX79_002267"
     CDS             2131..2760
                     /gene="rplC"
                     /locus_tag="RHX79_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDV2197426.1"
                     /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG
                     YRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFA
                     DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
                     MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA"
     gene            2771..3376
                     /gene="rplD"
                     /locus_tag="RHX79_002268"
     CDS             2771..3376
                     /gene="rplD"
                     /locus_tag="RHX79_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDV2197427.1"
                     /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAADARQGTR
                     AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR
                     GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
                     ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA"
     gene            3373..3675
                     /gene="rplW"
                     /locus_tag="RHX79_002269"
     CDS             3373..3675
                     /gene="rplW"
                     /locus_tag="RHX79_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007891652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDV2197428.1"
                     /translation="MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIK
                     AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE"
     gene            3693..4514
                     /gene="rplB"
                     /locus_tag="RHX79_002270"
     CDS             3693..4514
                     /gene="rplB"
                     /locus_tag="RHX79_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDV2197429.1"
                     /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRN
                     NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT
                     YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK"
     gene            4531..4809
                     /gene="rpsS"
                     /locus_tag="RHX79_002271"
     CDS             4531..4809
                     /gene="rpsS"
                     /locus_tag="RHX79_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDV2197430.1"
                     /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM
                     IGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
     gene            4824..5156
                     /gene="rplV"
                     /locus_tag="RHX79_002272"
     CDS             4824..5156
                     /gene="rplV"
                     /locus_tag="RHX79_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDV2197431.1"
                     /translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA
                     VLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            5174..5875
                     /gene="rpsC"
                     /locus_tag="RHX79_002273"
     CDS             5174..5875
                     /gene="rpsC"
                     /locus_tag="RHX79_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDV2197432.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT
                     KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN
                     IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
                     EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE
                     KPAAQPKKQQRKGRK"
     gene            5888..6298
                     /gene="rplP"
                     /locus_tag="RHX79_002274"
     CDS             5888..6298
                     /gene="rplP"
                     /locus_tag="RHX79_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDV2197433.1"
                     /translation="MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTAR
                     QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM"
     gene            6298..6489
                     /gene="rpmC"
                     /locus_tag="RHX79_002275"
     CDS             6298..6489
                     /gene="rpmC"
                     /locus_tag="RHX79_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000644743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDV2197434.1"
                     /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLK
                     QVRRDVARVKTLLNEKAGA"
     gene            6489..6743
                     /gene="rpsQ"
                     /locus_tag="RHX79_002276"
     CDS             6489..6743
                     /gene="rpsQ"
                     /locus_tag="RHX79_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006817275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDV2197435.1"
                     /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKL
                     HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL"
     gene            6908..7279
                     /gene="rplN"
                     /locus_tag="RHX79_002277"
     CDS             6908..7279
                     /gene="rplN"
                     /locus_tag="RHX79_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015817037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDV2197436.1"
                     /translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
     gene            7290..7604
                     /gene="rplX"
                     /locus_tag="RHX79_002278"
     CDS             7290..7604
                     /gene="rplX"
                     /locus_tag="RHX79_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDV2197437.1"
                     /translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKK
                     HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSET
                     IK"
     gene            7619..8158
                     /gene="rplE"
                     /locus_tag="RHX79_002279"
     CDS             7619..8158
                     /gene="rplE"
                     /locus_tag="RHX79_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDV2197438.1"
                     /translation="MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAI
                     ADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA
                     KSDEEGRALLAAFDFPFRK"
     gene            8173..8478
                     /gene="rpsN"
                     /locus_tag="RHX79_002280"
     CDS             8173..8478
                     /gene="rpsN"
                     /locus_tag="RHX79_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HDV2197439.1"
                     /translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNA
                     VLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            8512..8904
                     /gene="rpsH"
                     /locus_tag="RHX79_002281"
     CDS             8512..8904
                     /gene="rpsH"
                     /locus_tag="RHX79_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDV2197440.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG
                     FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            8917..9450
                     /gene="rplF"
                     /locus_tag="RHX79_002282"
     CDS             8917..9450
                     /gene="rplF"
                     /locus_tag="RHX79_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDV2197441.1"
                     /translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK
                     HADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV
                     INLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK
                     GVRYADEVVRTKEAKKK"
     gene            9460..9813
                     /gene="rplR"
                     /locus_tag="RHX79_002283"
     CDS             9460..9813
                     /gene="rplR"
                     /locus_tag="RHX79_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDV2197442.1"
                     /translation="MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNG
                     SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
                     VQALADAAREAGLQF"
     gene            9828..10331
                     /gene="rpsE"
                     /locus_tag="RHX79_002284"
     CDS             9828..10331
                     /gene="rpsE"
                     /locus_tag="RHX79_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDV2197443.1"
                     /translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG
                     RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS
                     VEEILGK"
     gene            10335..10514
                     /gene="rpmD"
                     /locus_tag="RHX79_002285"
     CDS             10335..10514
                     /gene="rpmD"
                     /locus_tag="RHX79_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HDV2197444.1"
                     /translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAI
                     RGMINAVSFMVKVEE"
     gene            10518..10952
                     /gene="rplO"
                     /locus_tag="RHX79_002286"
     CDS             10518..10952
                     /gene="rplO"
                     /locus_tag="RHX79_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDV2197445.1"
                     /translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG
                     GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIG
                     IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE"
     gene            10960..12291
                     /gene="secY"
                     /locus_tag="RHX79_002287"
     CDS             10960..12291
                     /gene="secY"
                     /locus_tag="RHX79_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004868351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDV2197446.1"
                     /translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI
                     DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL
                     AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTA
                     VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL
                     VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP
                     AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA
                     LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMR
                     DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR"
     gene            12323..12439
                     /gene="rpmJ"
                     /locus_tag="RHX79_002288"
     CDS             12323..12439
                     /gene="rpmJ"
                     /locus_tag="RHX79_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDV2197447.1"
                     /translation="MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG"
     gene            12586..12942
                     /gene="rpsM"
                     /locus_tag="RHX79_002289"
     CDS             12586..12942
                     /gene="rpsM"
                     /locus_tag="RHX79_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDV2197448.1"
                     /translation="MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVK
                     ISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            12959..13348
                     /gene="rpsK"
                     /locus_tag="RHX79_002290"
     CDS             12959..13348
                     /gene="rpsK"
                     /locus_tag="RHX79_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDV2197449.1"
                     /translation="MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW
                     ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            13382..14002
                     /gene="rpsD"
                     /locus_tag="RHX79_002291"
     CDS             13382..14002
                     /gene="rpsD"
                     /locus_tag="RHX79_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDV2197450.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGAR
                     KPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVV
                     YRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALE
                     LAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK"
     gene            14028..15017
                     /gene="rpoA"
                     /locus_tag="RHX79_002292"
     CDS             14028..15017
                     /gene="rpoA"
                     /locus_tag="RHX79_002292"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDV2197451.1"
                     /translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL
                     NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
                     SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR
                     RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE"
     gene            15058..15441
                     /gene="rplQ"
                     /locus_tag="RHX79_002293"
     CDS             15058..15441
                     /gene="rplQ"
                     /locus_tag="RHX79_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDV2197452.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKEL
                     RRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRSEKAEAAAE"
     gene            15548..15916
                     /locus_tag="RHX79_002294"
     CDS             15548..15916
                     /locus_tag="RHX79_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1992 domain-containing protein"
                     /protein_id="HDV2197453.1"
                     /translation="MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELR
                     AGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGL
                     STDFLRGDYADKLLNKINDN"
     gene            15927..16352
                     /gene="zntR"
                     /locus_tag="RHX79_002295"
     CDS             15927..16352
                     /gene="zntR"
                     /locus_tag="RHX79_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(2+)-responsive transcriptional regulator"
                     /protein_id="HDV2197454.1"
                     /translation="MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESD
                     LQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQS
                     MQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC"
     gene            16408..16626
                     /gene="arfA"
                     /locus_tag="RHX79_002296"
     CDS             16408..16626
                     /gene="arfA"
                     /locus_tag="RHX79_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor ArfA"
                     /protein_id="HDV2197455.1"
                     /translation="MSRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGK
                     HGNRGNWEASGKKVNHFFTTGLLLSGVC"
     gene            complement(16623..17033)
                     /gene="mscL"
                     /locus_tag="RHX79_002297"
     CDS             complement(16623..17033)
                     /gene="mscL"
                     /locus_tag="RHX79_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HDV2197456.1"
                     /translation="MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPP
                     LGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKL
                     NRKKEEPAAAPAPTKEEVLLTEIRDLLKEQNNRS"
     gene            complement(17163..18539)
                     /gene="trkA"
                     /locus_tag="RHX79_002298"
     CDS             complement(17163..18539)
                     /gene="trkA"
                     /locus_tag="RHX79_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HDV2197457.1"
                     /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFD
                     LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP
                     DYVRDADKLFHSDAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA
                     YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI
                     RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQN
                     TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA
                     YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS
                     RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL
                     FQPSPFFL"
     gene            complement(18561..19850)
                     /gene="rsmB"
                     /locus_tag="RHX79_002299"
     CDS             complement(18561..19850)
                     /gene="rsmB"
                     /locus_tag="RHX79_002299"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HDV2197458.1"
                     /translation="MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALL
                     QELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAET
                     VEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ
                     WQSIVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH
                     ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV
                     DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRH
                     PDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQR
                     TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK"
     gene            complement(19896..20843)
                     /gene="fmt"
                     /locus_tag="RHX79_002300"
     CDS             complement(19896..20843)
                     /gene="fmt"
                     /locus_tag="RHX79_002300"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDV2197459.1"
                     /translation="MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRG
                     KKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEM
                     PRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPIT
                     AEDTSGTLYDKLAELGPQGLINTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWS
                     LSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTATNAAPGTILEANKQGIQVA
                     TGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLV"
     gene            complement(20858..21367)
                     /gene="def"
                     /locus_tag="RHX79_002301"
     CDS             complement(20858..21367)
                     /gene="def"
                     /locus_tag="RHX79_002301"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDV2197460.1"
                     /translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG
                     IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVP
                     RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE
                     KLDRLKARA"
     gene            21497..22621
                     /gene="dprA"
                     /locus_tag="RHX79_002302"
     CDS             21497..22621
                     /gene="dprA"
                     /locus_tag="RHX79_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDV2197461.1"
                     /translation="MVDTEIWLRLMSISSLYGDDMVRIAHWLAKQSQIDAVGLQQTGL
                     TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLQATTDYPGALFVEGEL
                     HALHSFQLAIVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN
                     GVSIAVLGNGLNTIHPRRHARLAASLLEHGGALVSEFPLDVPPLAYNFPRRNRIISGL
                     SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP
                     EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP
                     VPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV"
     gene            22593..23066
                     /locus_tag="RHX79_002303"
     CDS             22593..23066
                     /locus_tag="RHX79_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HDV2197462.1"
                     /translation="MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNAL
                     LWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLET
                     REMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH"
     gene            23095..23637
                     /locus_tag="RHX79_002304"
     CDS             23095..23637
                     /locus_tag="RHX79_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HDV2197463.1"
                     /translation="MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYV
                     RPLKSSADGHIVKVLEGQVCLACGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDET
                     AITCPQCRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKT
                     AQGVKHFCASKQCGKPVSAE"
     gene            23642..24214
                     /gene="tsaC"
                     /locus_tag="RHX79_002305"
     CDS             23642..24214
                     /gene="tsaC"
                     /locus_tag="RHX79_002305"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase type 1
                     TsaC"
                     /protein_id="HDV2197464.1"
                     /translation="MNNNLQGDAIAAAIDVLNKERVIAYPTEAVFGVGCDPDSETAVM
                     RLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPAT
                     TPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGA
                     AFPVVPGETGGRLNPSEIRDALTGELFRQG"
     gene            24219..25037
                     /gene="aroE"
                     /locus_tag="RHX79_002306"
     CDS             24219..25037
                     /gene="aroE"
                     /locus_tag="RHX79_002306"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDV2197465.1"
                     /translation="METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFI
                     NTLNAFFRAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLLGDNTD
                     GIGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK
                     LFAHTGSIQALGMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKG
                     KTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA"
     gene            25034..25291
                     /locus_tag="RHX79_002307"
     CDS             25034..25291
                     /locus_tag="RHX79_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1488 domain-containing protein"
                     /protein_id="HDV2197466.1"
                     /translation="MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRF
                     TGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP"
     gene            complement(25267..25821)
                     /locus_tag="RHX79_002308"
     CDS             complement(25267..25821)
                     /locus_tag="RHX79_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HDV2197467.1"
                     /translation="MSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVV
                     IRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGN
                     RVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAG
                     LRYSANNYVKWKDEYLDQGNQTQP"
BASE COUNT         6695 a         6185 c         6753 g         6427 t
ORIGIN      
        1 gctaaagttc tgggctaatt acacgttaat tagttttgaa ttgaaaaggg cgcttcggcg
       61 ccctttttgc tgcccgtaat ttgagctcga aatatttagt cgtaattttg ctcgctgaac
      121 tatggcgcaa ataaaactgt gctattgtaa tcataaccat tctcatttac actttgcgca
      181 gaatttgaac gggagcaatc atgtacgttt gtttgtgtaa tggtgtaagt gacaaaaaaa
      241 ttcgccaggc agtccgtcag tttcatccgc aatctttcca acaattgcgt aagtttattc
      301 ctgtgggaaa tcaatgcggt aagtgcattc gcgccgcgcg cgaagtgatg caggacgagt
      361 tgatgcagat gccagaattt aaagagattg cctgaagacc acgcttattt tttgacatcc
      421 cgctagcccc atctacgctc taatagtgga agcggaggga ctataaaatg aaaggtgatg
      481 ttaaaatcat aaattatctc aataaactat tgggaaatga gcttgtcgca atcaatcagt
      541 attttctcca tgcccggatg tttaaaaact ggggcctgat gcgtctcaat gacgtcgaat
      601 accatgaatc catcgatgag atgaaacacg ctgataaata tatcgagcgt attttgtttt
      661 tagaaggaat ccccaactta caggatttag gcaaactggg gattggtgaa gatgtcgagg
      721 agatgctgca atccgacctg cgattagaac tggaaggcgc gaaggatctc cgtgaggcta
      781 tcgcgtatgc cgacagcgtt catgactatg ttagccgtga tatgatgatc gagatccttg
      841 ccgatgaaga aggtcatatt gactggctcg aaactgagct ggatctcatc ggtaaaatcg
      901 gtttacaaaa ttacctgcaa tcacaaataa aagttaaaga ttaacggcct gccagcaaac
      961 tatcccaacc tacaacgaaa cccgcagccg ccagaaatgg cccaaacggc agcgggtttt
     1021 ttaatgactc ttttcctctc atgagcagac caacaactac ggctccgcaa gcgaatgagg
     1081 cagcaaggaa aaccagtcgt ggcaagaagg tccaggtatg ccaggcacca agggcggcga
     1141 gaaacttcac atcaccatag cctaatcctt ctttatgacg cagtatgcga tacccccagt
     1201 aaatgacagc gaatgtgccg taaccaataa tcgcccccca taacgcatcg gctaaaccgt
     1261 caggattaca aacctgagag aacaaaagac ctgaccagag taacgggcag gtaaatctgt
     1321 caggtaacaa gccatgcttt gcatcccata aaaaaagtag gacagataaa caagcgtaca
     1381 aaatcagaaa gggaagggta gcgtccataa aacatcctct gtaattggag tatcaccatc
     1441 gaataactcc ggatgctcag caacagagaa atcgctgatt tgttaacctg gttccggtga
     1501 aaaacgctat cttcacaacc ttacaaattt cgtggaatac agctcgcaat ctgcgcgttg
     1561 cgattaattt ctacccgatg cttgcgtcag gctcagattt gcgtataatg cgcgggcttg
     1621 tcgtagttga cagcaggttc aatctgaacc tcagttagcc gaatttggct acctaacaat
     1681 gctcccaatc ggggagctac gtaagaacgg ttacactctc ccatcaatcg taatgggtct
     1741 gaggagtaat cattttcgtt tataaaataa ttggagctct ggtctcatgc agaaccaaag
     1801 aatccgtatc cgcctgaaag cgtttgatca tcgtctgatc gatcaagcaa ccgcggaaat
     1861 cgtcgagact gccaagcgca ctggtgcgca ggtccgtggt ccgatcccgc tgccgacacg
     1921 caaagagcgc ttcactgttc tgatctcccc gcacgtcaac aaagacgcgc gcgatcagta
     1981 cgaaatccgt actcacttgc gtctggttga catcgttgag ccaaccgaga aaaccgttga
     2041 tgctctgatg cgtctggatc tggctgccgg tgtagacgtg cagatcagcc tgggttaatc
     2101 aggtcattga gcgattgaga ggttgaaaca atgattggtt tagtcggtaa aaaagtgggt
     2161 atgacccgta tcttcacaga agacggcgtt tctatcccag taaccgtaat cgaagttgaa
     2221 gcaaaccgcg ttactcaggt taaagacctg gctaacgatg gctaccgtgc tattcaggtg
     2281 accaccggtg ctaaaaaagc taaccgtgtg accaagcctg aagctggcca cttcgctaaa
     2341 gctggcgtag aagctggccg tggtctgtgg gaattccgcc tggctgaagg cgaagagttc
     2401 actgtaggtc agagcattag cgttgaactg tttgctgacg ttaaaaaagt tgacgtaact
     2461 ggcacctcta aaggtaaagg tttcgcaggt accgttaagc gctggaactt ccgtacccag
     2521 gacgctactc acggtaactc cttgtctcac cgcgttccgg gttctatcgg tcagaaccag
     2581 actccgggca aagtgttcaa aggcaagaaa atggcaggtc agatgggtaa cgaacgtgta
     2641 accgttcaga gccttgacgt agtacgcgtt gacgctgagc gcaacctgct gctggttaaa
     2701 ggtgctgtcc cgggtgcaac cggtagcgac ctgatcgtta aaccagctgt gaaggcgtaa
     2761 ggagatagca atggaattag tattgaaaga cgcgcagagc gcgctgactg tttccgaaac
     2821 taccttcggt cgtgatttca acgaagcgct ggttcaccag gttgttgttg cttatgcagc
     2881 tgatgctcgt cagggtactc gtgctcagaa gactcgtgct gaagtaactg gttccggtaa
     2941 aaaaccgtgg cgccagaaag gcaccggccg tgcgcgttct ggttctatca agagcccgat
     3001 ctggcgttct ggtggcgtga cctttgctgc tcgtccgcag gaccacagtc aaaaagttaa
     3061 caagaagatg taccgcgggg cgctgaaaag catcctgtcc gaactggtac gtcaggatcg
     3121 tctgatcgtt gtcgagaagt tctctgtaga agcgccgaaa actaagctgc tggcacagaa
     3181 actgaaagac atggctctgg aagatgtgct gatcatcacc ggtgagctgg acgaaaacct
     3241 gttcctggct gcgcgcaacc tgcacaaggt tgacgtacgc gatgcaactg gtatcgaccc
     3301 ggttagcctg atcgccttcg acaaagtcgt aatgactgct gatgctgtta agcaagttga
     3361 ggagatgctg gcatgattcg tgaagaacgt ctgctgaagg tgctgcgtgc accgcacgtt
     3421 tctgaaaaag cgtctactgc gatggaaaaa tccaacacca tcgtactcaa agttgctaaa
     3481 gacgcgacca aagcagaaat caaagctgct gtgcagaaac tgtttgaagt cgaagtcgaa
     3541 gtcgttaaca ccctggtagt taaagggaaa gttaaacgtc acggacagcg tatcggtcgt
     3601 cgtagcgact ggaaaaaagc ttacgtcacc ctgaaagaag gccagaatct ggacttcgtt
     3661 ggcggcgctg agtaagtcgg aggagtaata caatggcagt tgttaaatgt aaaccgacat
     3721 ctccgggtcg tcgccacgta gttaaagtgg ttaaccctga gctgcacaag ggcaaacctt
     3781 ttgctccgtt gctggaaaaa aacagcaaat ccggtggtcg taacaacaat ggccgtatca
     3841 ccactcgtca tatcggtggt ggccacaagc aggcttaccg tattgttgac ttcaaacgca
     3901 acaaagacgg tatcccggca gttgttgaac gtcttgagta cgatccgaac cgttccgcga
     3961 acatcgcgct ggttctgtac aaagacggtg aacgccgtta catcctggcc cctaaaggcc
     4021 tgaaagctgg cgaccagatt cagtctggcg ttgatgctgc aatcaaacca ggtaacaccc
     4081 tgccgatgcg caacatcccg gttggttcta ctgttcataa cgtagaaatg aaaccaggta
     4141 aaggcggtca gctggcacgt tccgctggta cttacgttca gatcgttgct cgtgatggtg
     4201 cttatgtcac cctgcgtctg cgttctggtg aaatgcgtaa agtagaagca gactgccgtg
     4261 caactctggg cgaagttggc aatgctgagc atatgctgcg cgttctgggt aaagcaggtg
     4321 ctgcacgctg gcgtggtgtt cgtccgaccg ttcgcggtac cgcgatgaac ccggtagacc
     4381 acccacatgg tggtggtgaa ggtcgtaact ttggtaagca cccggtaact ccgtggggcg
     4441 ttcagaccaa aggtaagaag acccgcagca acaagcgtac tgataaattc atcgtacgtc
     4501 gccgtagcaa ataattttag aggataagcc atgccacgtt ctctcaagaa aggtcctttt
     4561 attgacctgc acttgctgaa gaaggtagag aaagcggtgg aaagcggaga caagaagccc
     4621 ctgcgcactt ggtcccgtcg ttcaacgatc tttcctaaca tgatcggttt gaccatcgct
     4681 gtccataatg gtcgtcagca cgttccggta tttgtaaccg acgaaatggt cggtcacaaa
     4741 ctgggtgaat tcgcaccgac tcgtacttat cgcggccacg ctgctgataa aaaagcgaag
     4801 aagaaataag gtaggaggaa gagatggaaa ctatcgctaa acatcgccat gctcgttctt
     4861 ctgctcagaa ggttcgcctt gttgctgacc tgattcgcgg taagaaagtg tcgcaggctc
     4921 tggatatttt gacctacacc aacaagaaag cggctgtact ggtcaagaaa gttctggaat
     4981 ctgccattgc taacgctgaa cacaacgatg gcgctgacat tgacgatctg aaagttacga
     5041 aaattttcgt agacgaaggc ccgagcatga agcgcattat gccgcgtgca aaaggtcgtg
     5101 cagatcgcat cctgaagcgc accagccaca tcactgtggt tgtgtccgat cgctgagact
     5161 ctggagacta gcaatgggtc agaaagtaca tcctaatggt attcgcctgg gtattgtaaa
     5221 accatggaac tctacctggt ttgcgaacac caaagaattc gctgacaacc tggacagcga
     5281 ttttaaagta cgtcagtacc tgactaagga actggctaaa gcgtccgtat ctcgtatcgt
     5341 tatcgagcgt ccggctaaga gcatccgtgt aaccattcac actgctcgcc cgggtatcgt
     5401 tatcggtaaa aaaggtgaag acgtagaaaa actgcgtaag gtcgtagcgg acatcgctgg
     5461 cgttcctgca cagatcaaca tcgccgaagt tcgtaagcct gaactggacg caaaactggt
     5521 tgctgacagc atcacttctc agctggaacg tcgcgttatg ttccgtcgtg ctatgaagcg
     5581 tgctgtacag aacgcaatgc gtctgggcgc taaaggtatt aaagttgaag ttagcggccg
     5641 tctgggcggc gcggaaatcg cacgtaccga atggtaccgc gaaggtcgcg taccgctgca
     5701 cactctgcgt gctgacatcg actacaacac ctctgaagcg cacaccactt acggtgtaat
     5761 cggcgttaaa gtgtggatct tcaaaggcga gatcctgggt ggtatggctg ctgttgaaca
     5821 accggaaaaa ccggctgctc agcctaaaaa gcagcagcgt aaaggccgta aataaggagc
     5881 gtcgctgatg ttacaaccaa agcgtacaaa attccgtaaa atgcacaaag gccgtaaccg
     5941 cggtctggcg cagggtacgg atgttagctt cggcagcttc ggtctgaaag ctgttggccg
     6001 tggtcgtctg actgcccgtc agatcgaagc agcacgtcgt gctatgaccc gtgcagttaa
     6061 gcgtcaaggt aagatctgga tccgtgtgtt cccggacaaa ccgatcactg aaaagccgct
     6121 ggcagtgcgt atgggtaaag gtaaaggtaa cgtggagtat tgggttgcct tgattcagcc
     6181 gggtaaagtc ctgtatgaaa tggacggtgt tccggaagag ctggcccgtg aagcattcaa
     6241 gctggcagca gcgaaactgc cgattaaaac cacctttgta actaagacgg tgatgtaatg
     6301 aaagcaaaag agctgcgtga gaagagcgtt gaagagctga acaccgagct gctgaacctg
     6361 ctgcgtgagc agttcaacct gcgtatgcag gctgcaagtg gccagctgca acagtctcac
     6421 ctgttgaagc aagtgcgtcg cgatgtcgca cgcgttaaga ctttactgaa cgagaaggcg
     6481 ggtgcgtaat gaccgataaa atccgtactc tgcaaggtcg cgttgttagc gacaaaatgg
     6541 agaaatccat tgttgttgct atcgaacgtt ttgtgaaaca cccgatctac ggtaaattca
     6601 tcaagcgtac gaccaaactg cacgtacatg acgagaacaa cgaatgcggt atcggtgacg
     6661 tggttgaaat ccgcgaatgc cgtccgctgt ccaagactaa atcctggacg ctggttcgcg
     6721 ttgtagagaa agcggttctg taatacagta cactctctcg atacgaataa acggctcaga
     6781 aatgagccgt ttattttttc tacccatatc cttgaagcgg tgttataatg ccgcgccctc
     6841 gatatgggga tttttaacga cctgattttc gggtctcagt agtagttgac attagcggag
     6901 cactaaaatg atccaagaac agactatgct gaacgtcgcc gacaactccg gtgcacgtcg
     6961 cgtaatgtgt atcaaggttc tgggtggctc gcaccgtcgc tacgcaggcg taggcgacat
     7021 catcaagatc accatcaaag aagcaattcc gcgtggtaag gtcaaaaaag gtgatgtgct
     7081 gaaggcggta gtggtgcgca ccaagaaggg tgttcgtcgc ccggacggtt ctgtcattcg
     7141 cttcgatggt aatgcttgtg ttcttctgaa caacaacagc gagcagccta tcggtacgcg
     7201 tatttttggg ccggtaactc gtgagcttcg tagtgagaag ttcatgaaaa ttatctctct
     7261 ggcaccagaa gtactctaag gagcgaatca tggcagcgaa aatccgtcgt gatgacgaag
     7321 ttatcgtgtt aaccggtaaa gataaaggta aacgcggtaa agttaagaat gtcctgtctt
     7381 ccggcaaggt cattgttgaa ggtatcaacc tggttaagaa acatcagaag ccggttccgg
     7441 ccctgaacca accgggtggc atcgttgaaa aagaagccgc tattcaggtt tccaacgtag
     7501 caatcttcaa tgcggcaacc ggcaaggctg accgtgtagg ctttagattc gaagacggca
     7561 aaaaagtccg tttcttcaag tctaacagcg aaactatcaa gtaatttgga gtagtacgat
     7621 ggcgaaactg catgattact acaaagacga agtagttaaa aaactcatga ctgagtttaa
     7681 ctacaattct gtcatgcaag tccctcgggt cgagaagatc accctgaaca tgggtgttgg
     7741 tgaagcgatc gctgacaaaa aactgctgga taacgcagca gcagacctgg cagcaatctc
     7801 cggtcaaaaa ccgctgatca ccaaagcacg caaatctgtt gcaggcttca aaatccgtca
     7861 gggctatccg atcggctgta aagtaactct gcgtggcgaa cgcatgtggg agttctttga
     7921 gcgcctgatc actattgctg tacctcgtat ccgtgacttc cgtggcctgt ccgctaagtc
     7981 tttcgacggt cgtggtaact acagcatggg tgtccgtgag cagatcatct tcccagaaat
     8041 cgactacgat aaagtcgacc gcgttcgtgg tttggatatt accattacca ctactgcgaa
     8101 atctgacgaa gaaggccgcg ctctgctggc tgcctttgac ttcccgttcc gcaagtaagg
     8161 tagggttact aaatggctaa gcaatcaatg aaagcacgcg aagtaaaacg cgtagcttta
     8221 gctgataaat acttcgcgaa acgcgctgaa ctgaaagcga tcatctctga tgtgaacgct
     8281 tccgacgaag atcgttggaa cgctgttctc aagctgcaga ctctgccgcg tgattccagc
     8341 ccgtctcgtc agcgtaaccg ctgccgtcaa acaggtcgtc cgcatggttt cctgcggaag
     8401 ttcgggttga gccgtattaa ggtccgtgaa gccgctatgc gcggtgaaat cccgggtctg
     8461 aaaaaggcta gctggtaatt gtcaccaatt gaatcacggg agtaaagaca gatgagcatg
     8521 caagatccga tcgcggatat gctgacccgt atccgtaacg gtcaggccgc gaacaaagct
     8581 gcggtcacca tgccttcctc caagctgaaa gtggcaatcg ccaacgtgct gaaggaagaa
     8641 ggttttattg aagattttaa agttgaaggc gacaccaagc ctgaactgga acttactctg
     8701 aagtatttcc agggcaaagc tgttgtagaa agcattcagc gtgtcagccg cccaggtctg
     8761 cgcatctata aacgtaaaga tgagctgccg aaagttatgg cgggtctggg tatcgcagtt
     8821 gtttctacct ctaaaggtgt tatgactgat cgtgcagcgc gccaggctgg tcttggtggc
     8881 gaaattatct gctacgtagc ctaatcggag gaaaaaatgt ctcgtgttgc taaagcaccg
     8941 gtcgttgttc ctgccggcgt tgacgtaaaa atcaacggtc aggttattac gatcaaaggt
     9001 aaaaacggcg agctgactcg tactctcaac gatgctgttg aagttaaaca tgcagataat
     9061 accctgacct tcggtccgcg tgatggttac gcagacggtt gggcacaggc tggtaccgcg
     9121 cgtgccctgc tgaactcaat ggttatcggt gttaccgaag gcttcactaa gaagctgcag
     9181 ctggttggtg taggttaccg tgcagcggtt aaaggcaatg tgattaacct gtctctgggt
     9241 ttctctcatc ctgttgacca tcagctgcct gcgggtatca ctgctgaatg tccgactcag
     9301 actgaaatcg tgctgaaagg cgctgataag caggtgatcg gccaggttgc agcggatctg
     9361 cgcgcctacc gtcgtcctga gccttataaa ggcaagggtg ttcgttacgc cgacgaagtc
     9421 gtgcgtacca aagaggctaa gaagaagtaa ggtaacacta tggataagaa atctgctcgt
     9481 atccgtcgtg cgacccgcgc acgccgcaag ctccaggagc tgggcgcaac tcgcctggtg
     9541 gtacatcgta ccccgcgtca catttacgca caggtaattg caccgaacgg ttctgaagtt
     9601 ctggtagctg cttctactgt agaaaaagct atcgctgaac aactgaagta caccggtaac
     9661 aaagacgcgg ctgcagctgt gggtaaagct gtcgctgaac gcgctctgga aaaaggcatc
     9721 aaagatgtat cctttgaccg ttccgggttc caatatcatg gtcgtgtcca ggcactggca
     9781 gatgctgccc gtgaagctgg ccttcagttc taaggtagag gtgtaagatg gctcacatcg
     9841 aaaaacaagc tggcgaactg caggaaaagc tgatcgcggt aaaccgcgta tctaaaaccg
     9901 ttaaaggtgg tcgtattttc tccttcacag ctctgactgt agttggcgat ggtaacggtc
     9961 gcgttggttt tggttacggt aaagcgcgtg aagttccagc agcgatccag aaagcgatgg
    10021 aaaaagcccg tcgcaatatg attaacgtcg cgctgaataa cggcactctg caacaccctg
    10081 ttaaaggtgt tcacacgggt tctcgcgtat tcatgcagcc ggcttccgaa ggtaccggta
    10141 tcatcgccgg tggtgcaatg cgcgccgttc tggaagtcgc tggggttcat aacgttctgg
    10201 ctaaagcata tggttccacc aacccgatca acgtggttcg tgcaactatt gatggcctgg
    10261 aaaatatgaa ttctccagaa atggtcgctg ccaagcgtgg taaatccgtt gaagaaattc
    10321 tggggaaata aaccatggca aagactatta aaattactca aacccgcagt gcaatcggtc
    10381 gtctgccgaa acacaaggca acgctgcttg gcctgggtct gcgtcgtatt ggtcacaccg
    10441 tagagcgcga ggatactcct gctattcgcg gtatgatcaa cgcggtttcc ttcatggtta
    10501 aagttgagga gtaagagatg cgtttaaata ctctgtctcc ggccgaaggc tccaaaaagg
    10561 cgggtaaacg cctgggtcgt ggtatcggtt ctggcctcgg taaaaccggt ggtcgtggtc
    10621 acaaaggtca gaaatctcgt tctggcggtg gcgtacgtcg cggtttcgag ggtggtcaga
    10681 tgcctctgta ccgtcgtctg ccgaaattcg gcttcacttc tcgtaaagca gcgattacag
    10741 ccgaagttcg tctgtctgac ctggctaaag tagaaggcgg tgttgtagac ctgaacacgc
    10801 tgaaagcggc taacattatc ggtatccaga tcgagttcgc gaaagtgatc ctggctggcg
    10861 aagtaacgac tccggtaact gttcgtggcc tgcgtgttac taaaggcgct cgtgctgcta
    10921 tcgaagctgc tggcggtaaa atcgaggaat aagtagcaga tggctaaaca accgggatta
    10981 gattttcaaa gtgccaaagg tggcttaggc gagctgaaac gcagactgct gtttgttatc
    11041 ggtgcgctga ttgtgttccg tattggctct tttattccga tccctggtat tgatgccgct
    11101 gtacttgcca aactgcttga gcaacagcga ggcaccatca ttgagatgtt taacatgttc
    11161 tctggtggtg ctctcagccg tgcttctatc tttgctctgg ggatcatgcc gtatatttcg
    11221 gcgtcgatca ttatccagct gctgacggtg gttcacccaa cgttggcaga aattaagaaa
    11281 gaaggggagt ctggtcgtcg taagatcagc cagtacaccc gttacggtac tctggtgctg
    11341 gcaatattcc agtcgatcgg tattgctacc ggtctgccga atatgcctgg tatgcaaggc
    11401 ctggtgatta acccaggctt tgcattctac ttcaccgctg ttgtaagtct ggtcacagga
    11461 acgatgttcc tgatgtggtt gggcgaacag attactgaac gaggtatcgg caacggtatt
    11521 tcaatcatta tcttcgccgg tattgtcgcg ggactcccgc cagccattgc ccatactatc
    11581 gagcaagcgc gtcaaggcga cctgcacttc ctcgtgttgc tgttggttgc agtattagta
    11641 tttgcagtga cgttctttgt tgtatttgtt gagcgtggtc aacgccgcat tgtggtaaac
    11701 tacgcgaaac gtcagcaagg tcgtcgtgtc tatgctgcac agagcacaca tttaccgctg
    11761 aaagtgaata tggcgggggt aatcccggca atcttcgctt ccagtattat tctgttcccg
    11821 gcgaccatcg cgtcatggtt cgggggcggt actggttgga actggctgac aacaatttcg
    11881 ctgtatttgc agcctgggca accgctttat gtgttactct atgcgtctgc aatcatcttc
    11941 ttctgtttct tctacacggc gttggttttc aacccgcgtg aaacagcaga taacctgaag
    12001 aagtccggtg catttgtacc aggaattcgt ccgggagagc aaacggcgaa gtatatcgat
    12061 aaagtaatga cccgcctgac cctggttggt gcgctgtata ttacctttat ctgcctgatc
    12121 ccggagttca tgcgtgatgc aatgaaagta ccgttctact tcggtgggac ctcactgctt
    12181 atcgttgttg tcgtgattat ggactttatg gctcaagtgc aaactctgat gatgtccagt
    12241 cagtatgagt ctgcattgaa gaaggcgaac ctgaaaggct acggccgata attggtcgcc
    12301 cgagaagtta cggagagtaa aaatgaaagt tcgtgcttcc gtcaagaaat tatgccgtaa
    12361 ctgcaaaatc gttaagcgtg atggtgtcat ccgtgtgatt tgcagtgccg agccgaagca
    12421 taaacagcgc caaggctgat tttttcgcat atttttcttg caaagttggg ttgagctggc
    12481 tagattagcc agccaatctt ttgtatgtct gtgcgtttcc atttgagtat cctgaaaacg
    12541 ggcttttcag catggaacgt acatattaaa tagtaggagt gcatagtggc ccgtatagca
    12601 ggcattaaca ttcctgatca taagcatgcc gtaatcgcat taacttcgat ttatggcgtc
    12661 ggcaagaccc gttctaaagc catcctggct gcagcgggta tcgctgaaga tgttaagatc
    12721 agtgagctgt ctgaaggaca aatcgacacg ctgcgtgacg aagttgccaa atttgtcgtt
    12781 gaaggtgatc tgcgccgtga aatcagcatg agcatcaagc gcctgatgga tcttggttgc
    12841 tatcgcggtt tgcgtcatcg tcgtggtctc ccggttcgcg gtcagcgtac caagaccaac
    12901 gcacgtaccc gtaagggtcc gcgcaaaccg atcaagaaat aatcggggtg attgaataat
    12961 ggcaaaggca ccaattcgtg cacgtaaacg tgtaagaaaa caagtctctg acggcgtggc
    13021 tcatatccat gcttctttca acaacaccat cgtgactatc actgatcgtc agggtaacgc
    13081 gttgggttgg gcaacagccg gtggttccgg tttccgtggt tctcgcaaat ccactccgtt
    13141 tgcagctcag gttgcagcag agcgttgcgc tgacgccgtg aaagaatacg gcatcaagaa
    13201 tctggaagtt atggttaaag gtccgggtcc aggccgcgaa tctactattc gtgctctgaa
    13261 cgccgcaggt ttccgcatca ctaatattac tgatgtgact ccgatccctc ataacggttg
    13321 tcgtccgccg aaaaaacgtc gcgtataacg cctcgttttc caggtttgtt ggagaaagaa
    13381 aatggcaaga tatttgggtc ctaagctcaa gctgagccgt cgtgagggca ccgacttatt
    13441 ccttaagtct ggcgttcgcg cgatcgatac caagtgtaaa attgaacaag ctcctggcca
    13501 gcacggtgcg cgtaaaccgc gtctgtctga ctatggtgtg cagttgcgtg aaaagcaaaa
    13561 agttcgccgt atctatggtg tgctggagcg tcagttccgt aactactaca aagaagcagc
    13621 acgtctgaaa ggcaacaccg gtgaaaacct gttggctctg ctggaaggtc gtctggacaa
    13681 cgttgtatac cgtatgggct tcggtgccac tcgtgcagaa gcacgtcagc tggttagcca
    13741 taaagcaatt atggtaaacg gtcgtgttgt taacatcgct tcttatcagg ttagtccgaa
    13801 tgacgttgta agcattcgtg agaaagcgaa gaagcagtct cgcgtgaaag ccgctctgga
    13861 gctggctgag cagcgtgaaa agccaacctg gctggaagtt gatgctggca agatggaagg
    13921 tacgtttaag cgtaagccgg agcgttctga tctgtctgcg gacattaacg aacacctgat
    13981 cgtcgagctt tactccaagt aaagcttagt accaaagaga ggacacaatg cagggttctg
    14041 tgacagagtt tctaaaaccg cgcctggttg atatcgagca agtgagttcg acgcacgcca
    14101 aggtgaccct tgagccttta gagcgtggct ttggccatac tctgggtaac gcactgcgcc
    14161 gtattctgct ctcatcgatg ccgggttgcg cggtgaccga ggttgagatt gatggtgtac
    14221 tacatgagta cagcaccaaa gaaggcgttc aggaagatat cctggaaatc ctgctcaacc
    14281 tgaaagggct ggcggtgaga gttcagggca aagatgaagt tattcttacc ttgaataaat
    14341 ctggcattgg ccctgtgact gcagccgata tcacccacga cggtgatgtc gaaatcgtca
    14401 agccgcagca cgtgatctgc cacctgaccg atgagaacgc gtctattagc atgcgtatca
    14461 aagttcagcg cggtcgtggt tatgtgccgg cttctacccg aattcattcg gaagaagatg
    14521 agcgcccaat cggccgtctg ctggtcgacg catgctacag ccctgtggag cgtattgcct
    14581 acaatgttga agcagcgcgt gtagaacagc gtaccgacct ggacaagctg gtcatcgaaa
    14641 tggaaaccaa cggcacaatc gatcctgaag aggcgattcg tcgtgcggca accattctgg
    14701 ctgaacaact ggaagctttc gttgacttac gtgatgtacg tcagcctgaa gtgaaagaag
    14761 agaaaccaga gttcgatccg atcctgctgc gccctgttga cgatctggaa ttgactgtcc
    14821 gctctgctaa ctgccttaaa gcagaagcta tccactatat cggtgatctg gtacagcgta
    14881 ccgaggttga gctccttaaa acgcctaacc ttggtaaaaa atctcttact gagattaaag
    14941 acgtgctggc ttcccgtgga ctgtctctgg gcatgcgcct ggaaaactgg ccaccggcaa
    15001 gcatcgctga cgagtaaccg gatcacaggt taaggtttta ctgagaagga taaggtcatg
    15061 cgccatcgta agagtggtcg tcaactgaac cgcaacagca gccatcgcca ggctatgttc
    15121 cgcaatatgg caggttcact ggttcgtcat gaaatcatca agacgactct gcctaaagcg
    15181 aaagagctgc gccgcgtagt tgagccgctg attactcttg ccaagactga tagcgttgct
    15241 aatcgtcgtc tggcattcgc ccgtactcgt gataacgaga tcgtggcaaa actgtttaac
    15301 gaactgggcc cgcgtttcgc gagccgtgcc ggtggttaca ctcgtattct gaagtgtggc
    15361 ttccgtgcag gcgacaacgc gccgatggct tacatcgagc tggttgatcg ttcagagaaa
    15421 gcagaagctg ctgcagagta atctgaagca acgtaaaaaa acccgccccg gcgggttttt
    15481 ttatacccgt agcatcccca cttatctaca atagctgtac tctttttgtt catcccctgg
    15541 agtatatatg tggttacttg accagtgggc agagcgtcat atagcagaag cgcaagcgaa
    15601 aggtgagttt gataacctgg caggtagcgg cgaaccattg atactggatg atgattctca
    15661 cgtgccaccg gaattacgtg cggggtatcg cttgttgaag aatgccggtt gcttaccgcc
    15721 agaacttgag caacggaggg aagcaattca gcttctggat attctcaaag gtatccgtca
    15781 cgatgatccg caatatcaag aggttagccg tcgattgtca ttactggaat tgaagctgcg
    15841 acaagctgga ctgagtaccg attttttacg cggcgattat gctgacaagt tgttgaataa
    15901 aatcaacgat aactagtgga gtatgtatgt atcgcattgg tgagctggca aaaatggcgg
    15961 aagtaacacc cgacacgatt cgttattacg aaaaacagca gatgatggag catgaagtgc
    16021 gtactgaagg tgggtttcgc ctgtataccg aaagcgatct ccagcgattg aaatttatcc
    16081 gccatgccag acaactaggt ttcagtctgg agtcgatccg cgagttgctg tcgatccgta
    16141 tcgatcctga acaccatacc tgtcaggagt caaaaggcat tgtgcaggaa agattgcagg
    16201 aagtcgaagc acggatagcc gagttgcaga gtatgcagcg ttccttgcaa cgccttaacg
    16261 atgcctgttg tgggaccgcc catagcagtg tttattgctc gattcttgaa gctcttgaac
    16321 aaggggcgag tggcgttaag agtggctgtt gattttttgc actgacagga ttacactcgc
    16381 gccgttaaat aaccaactgg agtttttatg agccgatatc agcatactaa agggcagata
    16441 aaggataatg cgatagaagc attactacat gatcccttat tccgacagcg agtagagaaa
    16501 aataagaaag ggaaaggcag ttacatgcga aaaggaaaac atggcaatcg ggggaactgg
    16561 gaggccagtg gcaagaaagt aaatcacttt tttaccactg gccttctgct ttcaggcgtt
    16621 tgttaagagc ggttattctg ctctttcagc aaatcacgaa tttctgtcag taatacttct
    16681 tctttagttg gtgctggtgc ggctgctggt tcttcttttt tccgattcag tttgttgatt
    16741 agcttaatcg ccataaagat ggcaaaggcc acaatcagaa aatcaaagac gttttgaatg
    16801 aagacaccgt aatgcatcac aacagcaggg atatccccct gcgcatcgcg tagcgtgaca
    16861 gcaaactgtt taaagtcgat cccgccaatt aataagccca gaggtggcat gatgatatcg
    16921 gcaaccagtg aagatacaat cttcccgaat gccgcaccga taatgacacc caccgccaaa
    16981 tccaccacgt tcccgcgcat cgcaaattcg cgaaattctt taataatgct catgttattc
    17041 tccctatgaa gccgacaacc ataagtctaa caaatgttaa gccattttcc tgccaggaat
    17101 gaatttaatt aatccttgat aatcaaaggg aaataataag gcgtcattag acgccttatt
    17161 aattacaaga agaaagggct tggctggaag agtctttcga cgtcggtaat aaacttttta
    17221 tctgtgagga acataattac gtgatcgcct tgctcaatgc gcagattgtc attggcaatc
    17281 atcacgtcgt ttccacgtac caccgctcca ataatcgttc ctggcggtag cttgatttcg
    17341 tcaatgactc tgccgacaac gcgtgaggtg ctttcatcac cgtgagcaac ggcttcaata
    17401 gcttctgcta cgccgcggcg caatgaggaa acaccaacaa tatctgcttt tcgcacatgg
    17461 ctaagcaacg cagaaatagt tgcttgttgt ggtgaaatcg caatatcgat cacgctcccc
    17521 tgaaccagat ccacataagc gcgacgctgg atcaatacca tcaccttttt cgcacccata
    17581 cgtttggcaa gcatggcgga catgatattg gcctcgtcat cgttggtgac ggcaataaac
    17641 agatcaactt gatcgatatg ttcttcggcc agcagttctt gatccgacgc atcaccaaaa
    17701 aagacgatcg tattctgcaa cttttccgcc agttcggcag cgcgctgctg attacgttcg
    17761 atgagtttaa cgctgtaatc tttttccaga cgacgcgcca gccctgcacc gatattaccg
    17821 ccaccaacca gcatgatccg cttatacggt ttttccagtc gctgtaattc actcatcacc
    17881 gcacggatat gctgtgaagc ggcaataaag aacacttcat caccagcttc cacaatggtc
    17941 gaaccttgtg gacgaatggg gcgatcgtgg cggaaaattg ctgccacacg agtatcgata
    18001 tgtggcatat gttcgcgcat ggtcgaaagt gcgttaccaa tcagcgggcc gccataatag
    18061 gctttaacca cagcgaggct gactttaccc tcagcgaagt tcaccacctg caatgcgccg
    18121 ggatactcaa tcagtcggta aatattatcg ataaccaact gctctggtgc gatcagatga
    18181 tcaatcggta cagcatctga atgaaatagc ttatcggcat cgcgcacgta gtctggtgag
    18241 cggatgcgag cgatgcgatt aggggtgttg aaaagtgagt aggctacctg gcaggcaacc
    18301 atattggttt catctgaact ggttacagca accagcatat cggcgtcgtc ggcacctgcc
    18361 tcccgcaata cgcgtggatg agagccatgc ccctgcacga ctcgcaggtc aaatttatcc
    18421 tgcaaggtcc gcagacgctc accgttggta tcgacaacag tgatatcgtt gttctcgcca
    18481 accaggtttt ccgccagtgt gccgccaacc tggccggcac ccagaatgat aattttcatc
    18541 agtcgcgacc cgttatctca tcactttttg attagcttag cgtaaaagaa gccgtcgccc
    18601 tcttcggcac caggcagatt ttgtttaccc ggttgctctg gtgttcctgt ttcgcaaagt
    18661 tcggcatcag cggtacgttg caaaaaggct ttaatctgca ggctattctc ttccggtaac
    18721 accgaacagg tggcatagac cagggttcca ccggatttta aatgcggcca aatggcgtcg
    18781 agaatttcag actgcaattg cgcgagttcc gggatatcgc gatcgcgacg taaccattta
    18841 atatccggat ggcgacgaat cacaccggtt gctgaacaag gcgcatctaa taaaatgcga
    18901 tcaaactgtt gctcgccaca ccattgggaa gggtagcggc catcaccttg tttcacggtc
    18961 gctttcatac caaggcgttt taaattgtcg taaacgcgag agaggcgctg ttcgtcaata
    19021 tcaaccgcaa caacctgcgc ttctggtgcc acctcaagga tatgcgttgt tttaccgccg
    19081 ggggcggcac aaagatccag aatgtgttca ccgttttgtg gcgcaagcca ggtcatgcaa
    19141 ccttgtgctg atgcatcctg aacggtaacc catccgtctt caaaaccagg tagcgcatga
    19201 acaggtgcag gtgtttccag ccgtacagca tcagggtaat ccgcatgcgg gaaacctttc
    19261 attcctgctt catccaacaa tgcaagccag ctgtcgcggg aatgatgcgt acgattaacg
    19321 cgcagccaca ttggcggacg ctggttattg gcttcgacga tggattgcca ctgctctgga
    19381 tacgcttttt gcagacgctt cagcaaccag gaaggatgca gataacgtgc atcactggca
    19441 ttaaactcgg ctaataactc ttcttgctga cgctggaact ggcgtaatac accgtttatc
    19501 aaccctttaa gttgcggacg cttaattgcg atagcgcctt caaccgtttc agccagcgca
    19561 gcatgaggtg gaatgcgggt ataaagcagt tgatacaaac caaccataat caggtaatgc
    19621 acggtccgct gtttgccggt catcggacgg gccattaact tattaatcag ccagtctaac
    19681 tgcgaaagcg tacgcagtac gccaaagcac aactcttgaa gaagtgcttt gtctttatcg
    19741 gaaacttttt gctggagcgg tggcagaatg ttgcttaatg attgcccttg ctcgacgact
    19801 tgttcaacgg cctgggccgc catgctacgt aaattacgtt gttttttcat aagtataaaa
    19861 acgcccggca agaccgggct tagaagagtg gactatcaga ccagacggtt gcccggaaca
    19921 aaccattccc gacgagagtt caggaggtct tgcgcgctca tcgctttctt acccgcaggt
    19981 tgtaacgaga gcaggttcag gatgccatca ccagtcgcaa cctgaatgcc ttgtttgttg
    20041 gcttcaagga tcgttcctgg tgcagcgttg gttgccgtat caatgaccga tgctttccag
    20101 actttaaccg gctgtccttc aatttccagc cagctcattg gccatggatt gaaagcgcga
    20161 atgcagcgtt caagctgtgc tgccgaaagt gaccagtcaa tacgcgcttc ttctttactc
    20221 aacttttcgg cgtaagtgac aagagtttcg tcctgaactt ctggtttcgc cgtgccgtct
    20281 gccagttgtt tcaacgtgtt gataagccct tgtgggccaa gctctgccag cttgtcgtac
    20341 agcgtaccac tggtatcttc tgcagtaatc gggcaggaga gcttatagag catgtcaccg
    20401 gtgtctaaac cgacatccat ttgcataatg gtcacaccag tttctgcatc acccgcccat
    20461 agtgagcgtt ggattggtgc agcaccgcgc cagcgtggca gcagtgaacc atgaacgttg
    20521 atacagccaa gacgcggcat ctccagcact gctttaggca gaattaagcc ataggcgacg
    20581 acgaccataa catcagcctg cagatcggcg accagttgct ggttttcttg tggacgcagg
    20641 gaaacaggtt gaaaaacggg cagacctttt tcctcagcca gaactttaac cgggctgggc
    20701 atcagttttt taccgcgtcc tgccggtcgg tctggctggg tgaacacgcc aacgacgtta
    20761 tgaccagaag acaacagcgc gtcgagatga cgcgctgcaa agtcaggtgt acccgcaaaa
    20821 ataatacgta gtgattctga cacgttagtt cttatcctta agcccgggct ttcagacgat
    20881 ccagtttttc aactttctga cgaatacgtt gttgtttcaa cggtgacaga taatccataa
    20941 acagtttgcc gaccaggtga tccatctcat gctgaataca gatggctaac agaccgtctg
    21001 cttccaattc aaatggttta ccgtcgcggt ccagggcgcg aattttaact ttctctgcgc
    21061 gtggcactaa agcacgttgt tcagggatcg acaggcaacc ttcttcaatg cctgtttcgc
    21121 cgcttttttc taaaagctcc ggattgatta acaccagccg ttcgtcacgg ttttccgaaa
    21181 catcaataac aatgatacgt tgatggatat caacctgggt tgccgccagg ccaatacctt
    21241 cttctgcgta catcgtctcg aacatatcat cgacgatacg ctgaatttct gcattcactt
    21301 cttctaccgg tttagcaact ttgcgaagcc gctcgtccgg aatatgtaac acttgcaaaa
    21361 ctgacataaa tctccagaga tgtgttcagg agttagaaag attatttctt ctattctaga
    21421 caaatccccc tctgattgac agcatcactg accaatcgca aagattgcta aggctgctta
    21481 tggcagggag ataaggatgg tcgatacaga aatttggctg cgtttaatga gtatcagcag
    21541 cttgtacggc gatgatatgg tccgtatagc tcactggctg gcaaaacagt cgcaaattga
    21601 tgcggttgga ttgcagcaaa cagggcttac attgcggcag gcacaacgct ttctttcatt
    21661 tccgcgaaag agtatcgaaa gctcactttg ttggttggag caacccaacc atcatttaat
    21721 ccctgcggac agcgaatttt atcctcctca acttcaggcg acgacagatt accccggcgc
    21781 actgtttgtt gaaggagaac tgcacgcgct gcattcattt cagcttgcca tagtggggag
    21841 tcgggcgcat tcatggtatg gcgagcgatg gggacgatta ttttgcgaaa ctctggcgac
    21901 gcgtggagtg acaattacaa gtggactggc gcgtggaatc gatggtgtgg cgcataaagc
    21961 ggccttacag gtaaatggcg tcagcattgc tgtattgggg aatggactta ataccattca
    22021 tccccgccgc catgcccgac tggctgccag tttgcttgaa catggcggag ctctcgtctc
    22081 ggaatttccc ctcgatgttc caccccttgc ttacaatttc ccacgaagaa atcgcattat
    22141 cagtggtcta agtaaaggtg tactggtggt ggaagcggct ttgcgcagtg gttcgctagt
    22201 gacagcacgt tgtgcgcttg agcaggggcg tgaagttttt gccttgccag gtccaatagg
    22261 gaatccggga agcgaagggc ctcactggtt aataaaacaa ggtgcgattc ttgtgacgga
    22321 accggaagaa attctggaaa acttgcaatt tggattgcac tggttgccag acgcccctga
    22381 aaattcattt tattcaccag atcagcaaga cgtggcattg ccatttcctg agctcctggc
    22441 taacgtagga gatgaggtaa cacctgttga cgtcgtcgct gaacgtgccg gccaacctgt
    22501 gccagaggta gttactcaac tactcgaact ggagttagca ggatggatcg cagctgtacc
    22561 cggcggctat gtccgattga ggagggcatg ccatgttcga cgtactaatg tatttgtttg
    22621 aaacctatat tcacacagaa gctgagttgc gtgtggatca agacaaactt gaacaggatc
    22681 ttaccgacgc aggatttgat cgagaagata tctacaatgc cctgctttgg ctggaaaagc
    22741 ttgcggatta tcaggaagga ctggcagaac cgatgcaact ggcctctgat ccactctcca
    22801 tgcgtattta tacccctgag gagtgtgaaa gactggatgc cagctgtcgt ggttttctgc
    22861 ttttccttga gcaaattcag gtgcttaacc ttgaaacccg tgaaatggtg atagagcgag
    22921 tgctcgcgct ggataccgca gagttcgacc tggaagacct gaaatgggta atcctgatgg
    22981 tgttgttcaa tattccgggc tgcgaaaatg cgtaccagca aatggaagaa ttactctttg
    23041 aagtgaatga aggtatgctg cattaatcat ttctttaatt cagcataagt tgttatggcg
    23101 aaatcagcac tgttcacggt gcgtaataat gagtcctgcc caaagtgcgg ggctgaactg
    23161 gttattcgat ccgggaaaca cggtccgttt cttggatgct cacagtatcc ggcgtgtgac
    23221 tacgtccgtc ctctgaaatc ttcagcggat ggacatattg tcaaagttct ggaggggcag
    23281 gtttgccttg catgtggcgc aaatctggta ttacgccagg gacgctttgg tatgtttatt
    23341 ggttgcagta actaccctga atgcgaacat accgaactta tcgataaacc ggacgaaaca
    23401 gcaattacat gcccccaatg ccggacgggc catctggtcc agcgccgctc ccgttatggc
    23461 aaaacatttc actcctgtga tcgctacccg gagtgtcaat ttgccattaa cttcaaaccc
    23521 atagctggag aatgccctga gtgtcattat ccactactca tcgaaaagaa aaccgcgcag
    23581 ggtgtaaaac acttttgtgc cagtaaacaa tgtggaaagc cggtttcggc ggaataataa
    23641 cgtgaataat aacctgcaag gagacgctat cgcagctgcg atagatgtcc tcaataaaga
    23701 acgtgtcatc gcctatccaa cggaagccgt tttcggtgtt gggtgcgatc ctgatagcga
    23761 aacagcagtg atgagactgt tggagttaaa acagcgtccg gttgataagg ggctgatttt
    23821 aatcgcggca aattacgagc agcttaaacc ctatattgat gacaccatgc tgactgatgc
    23881 gcagcgtgaa accatttttt cccgctggcc aggtcctgtc acctttgtct ttcccgcgcc
    23941 tgcgacaaca ccgcgctggt tgacgggccg ctttgattcg cttgctgtac gagtcaccga
    24001 ccatccgttg gtggttgctt tgtgccaggc ttatggtaaa ccgctggttt ctaccagtgc
    24061 caacttgagc ggattgccac cttgtcgaac agtagacgaa gttcgcgcac aatttggcgc
    24121 ggcgttcccg gttgtgcctg gtgaaacggg ggggcgttta aatccttcag aaatccgcga
    24181 tgccctgacg ggtgaactgt ttcgacaggg gtaacataat ggaaacctat gctgtttttg
    24241 gtaatccgat agcccacagc aaatcgccat tcattcatca gcaatttgct cagcaactga
    24301 atattgaaca tccctatggg cgcgtgttgg cacccatcaa tgatttcatc aacacactga
    24361 acgctttctt tcgtgctggt ggtaaaggtg cgaatgtgac ggtgcctttt aaagaagagg
    24421 cttttgccag agcggatgag cttactgaac gggcagcgtt ggctggtgct gttaataccc
    24481 tcaagcggtt agaagatgga cgcctgctgg gtgacaatac cgatggtata ggtttgttaa
    24541 gcgatctgga acgtctgtct tttatccgtc ctggtttacg tattctgctc atcggcgctg
    24601 gtggagcatc tcgcggcgta ctactgccac ttctttccct ggactgtgcg gtgacaatca
    24661 ctaatcggac ggtatcccgc gcggaagagt tggctaaatt gtttgcgcac actggcagta
    24721 ttcaggcgtt gggtatggac gaactggaag gtcatgagtt tgatctcatt attaatgcaa
    24781 catccagtgg catcagtggt gatattccgg cgatcccgtc atcgctcatt catccaggca
    24841 tttattgcta tgacatgttc tatcagaaag gaaaaactcc ttttctggca tggtgtgagc
    24901 agcgaggctc aaagcgtaat gctgatggtt taggaatgct ggtggcacag gcggctcatg
    24961 cctttcttct ctggcacggt gttctgcctg acgtagaacc agttataaag caattgcagg
    25021 aggaattgtc cgcgtgaatc aggccatcca gtttccggac agagaagagt gggacgagaa
    25081 taaaaaatgt gtatgttttc ccgctctcgt gaatggcatg caactgacat gtgcgatctc
    25141 tggcgagagt ctggcgtatc gttttactgg agatacgcca gaacagtggt tagcgagttt
    25201 tcgtcagcat cgctgggatc tggaagaaga agcggaaaac ttaattcagg aacaaagtga
    25261 agatgatcaa ggctgggtct ggttaccctg atccagatat tcgtccttcc atttcacgta
    25321 attattcgcg gaatagcgta acccagcctt ctcttcatca cttaacgggc ggatctgttt
    25381 gacggggcta ccgagataca gatatccgct ctccagccgt ttattttgtg ggaccagact
    25441 acccgcacca atcatcacat catcttctac tattgcgcca tcaagtaaaa ttgagcccat
    25501 cccaaccaaa actcgattgc caatggtgca gccgtggagc atcaccttgt gaccaacagt
    25561 gacatcttcg ccaatggtta atgggttgcc atctgggttg tacgaggatt tatgagtgac
    25621 atgcaacata ctgccatcct ggatattggt gcgtgctccg atctgtacat aatgtacatc
    25681 tccacgaatc acaacgagcg gccagatccc cacatcatca gccagacgaa cgtcaccaat
    25741 cacgacactg ctatcgtcga tcattacgcg ctgaccgatt tgtggaaaaa gatcgcggta
    25801 tgggcgtaaa acatcagaca tacttacctc agcaataaat gatttactaa tgactttggg
    25861 ggcattattg gccttgtgca agtcttttag tatgcaaaaa agcaccgttt tgtgtgcgaa
    25921 tgcagcaaaa agggtgaaaa aacaacaaac agaaaaaaag atcaaaaaag tacttgtgca
    25981 aaaaattggg atccctataa tgcgcctccg ttgagacgac aacgtgaaac acttcacaag
    26041 atggtcgtaa caacgaagag
//
LOCUS       DAPGWB010000058        26059 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.058, whole genome shotgun sequence.
ACCESSION   DAPGWB010000058 DAPGWB010000000
VERSION     DAPGWB010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 26059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26059
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.058"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(1..1747)
                     /locus_tag="RHX79_002309"
                     /pseudo
     CDS             complement(1..1747)
                     /locus_tag="RHX79_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310454.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
     gene            2271..4199
                     /gene="thrS"
                     /locus_tag="RHX79_002310"
     CDS             2271..4199
                     /gene="thrS"
                     /locus_tag="RHX79_002310"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006894721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDV2197468.1"
                     /translation="MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGEL
                     VDACDLIENDAQLSIITAKDEDGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGF
                     YYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSIL
                     DENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI
                     YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE
                     LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC
                     PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNI
                     PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV
                     MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAG
                     IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEV
                     IEKLQQEIRSRSLKQLEE"
     gene            4203..4745
                     /gene="infC"
                     /locus_tag="RHX79_002311"
     CDS             4203..4745
                     /gene="infC"
                     /locus_tag="RHX79_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDV2197469.1"
                     /translation="MKGGKRVQTARPNRINGEIRAQEVRLTGLEGEQLGIVSLREALE
                     KAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT
                     DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVES
                     FPTKIEGRQMIMVLAPKKKQ"
     gene            4842..5039
                     /gene="rpmI"
                     /locus_tag="RHX79_002312"
     CDS             4842..5039
                     /gene="rpmI"
                     /locus_tag="RHX79_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDV2197470.1"
                     /translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL
                     RPKAMVSKGDLGLVIACLPYA"
     gene            5092..5448
                     /gene="rplT"
                     /locus_tag="RHX79_002313"
     CDS             5092..5448
                     /gene="rplT"
                     /locus_tag="RHX79_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDV2197471.1"
                     /translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFTALVEKAKAALA"
     misc_feature    5565..5689
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01859"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Phe leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01859"
     gene            5571..5615
                     /gene="pheM"
                     /locus_tag="RHX79_002314"
     CDS             5571..5615
                     /gene="pheM"
                     /locus_tag="RHX79_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pheST operon leader peptide PheM"
                     /protein_id="HDV2197472.1"
                     /translation="MNAAIFRFFFYFST"
     gene            5899..6882
                     /gene="pheS"
                     /locus_tag="RHX79_002315"
     CDS             5899..6882
                     /gene="pheS"
                     /locus_tag="RHX79_002315"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004851795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDV2197473.1"
                     /translation="MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTT
                     LRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIE
                     NGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF
                     DTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNI
                     SFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH
                     PNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK"
     gene            6897..9284
                     /gene="pheT"
                     /locus_tag="RHX79_002316"
     CDS             6897..9284
                     /gene="pheT"
                     /locus_tag="RHX79_002316"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDV2197474.1"
                     /translation="MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHG
                     VVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGD
                     FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEI
                     SVTPNRADCLGIIGVARDVTVLNQLPLVEPEIVPVGATIDDTLPITVEAPEACPRYLG
                     RVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGI
                     VVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLE
                     CAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVI
                     DITNEATLPKRATITLRRSKLDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPS
                     WRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQ
                     EVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNR
                     VRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESV
                     LDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVF
                     ELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL
                     FDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD"
     gene            9289..9588
                     /gene="ihfA"
                     /locus_tag="RHX79_002317"
     CDS             9289..9588
                     /gene="ihfA"
                     /locus_tag="RHX79_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HDV2197475.1"
                     /translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV
                     KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE"
     gene            9689..10669
                     /gene="btuC"
                     /locus_tag="RHX79_002318"
     CDS             9689..10669
                     /gene="btuC"
                     /locus_tag="RHX79_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter permease BtuC"
                     /protein_id="HDV2197476.1"
                     /translation="MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWF
                     SPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLI
                     AAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM
                     TWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGE
                     ISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLL
                     PGCALAGASALLLADVVARLALAAAELPIGVVTATLGAPVFIWLLLKAGR"
     gene            10732..11283
                     /gene="btuE"
                     /locus_tag="RHX79_002319"
     CDS             10732..11283
                     /gene="btuE"
                     /locus_tag="RHX79_002319"
                     /EC_number="1.11.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional thioredoxin/glutathione peroxidase"
                     /protein_id="HDV2197477.1"
                     /translation="MQDSILTTVVKDIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYE
                     QLENIQKAWADRGFVVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGE
                     GRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGLVIQ
                     RFSPDMTPEDPIVMESIKLALAK"
     gene            11283..12032
                     /gene="btuD"
                     /locus_tag="RHX79_002320"
     CDS             11283..12032
                     /gene="btuD"
                     /locus_tag="RHX79_002320"
                     /EC_number="7.6.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter ATP-binding protein
                     BtuD"
                     /protein_id="HDV2197478.1"
                     /translation="MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLA
                     RMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKT
                     RTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEP
                     MNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRRE
                     EVLTPPNLAQAYGMNFRRLDIEGHRMLISTI"
     gene            12110..12574
                     /locus_tag="RHX79_002321"
     CDS             12110..12574
                     /locus_tag="RHX79_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV2197479.1"
                     /translation="MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQS
                     WHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKEQASIGTQIDKDELLPGDL
                     VFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI"
     gene            12821..13534
                     /gene="ydiV"
                     /locus_tag="RHX79_002322"
     CDS             12821..13534
                     /gene="ydiV"
                     /locus_tag="RHX79_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-FlhDC factor"
                     /protein_id="HDV2197480.1"
                     /translation="MKIFLENLYHSDCYFLPIRDNQQLLVGVELITHFSSEDGTVRIP
                     TSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAG
                     ELLKYPFIELLINENYPHLNEGKDNRDLLSLSQMYPLVLGNLGAGNSTMKAVFDGLFT
                     RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTTEILAQITPFDFHAL
                     QGCLWPAVPINQITTLVQR"
     gene            13597..15033
                     /locus_tag="RHX79_002323"
     CDS             13597..15033
                     /locus_tag="RHX79_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HDV2197481.1"
                     /translation="MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIP
                     SSLFKNAAGVWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTM
                     DWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
                     TVEPGAMLIRVAPSHLRFGHFEHFYYRREPEKVRQLADFAIRHYWSHLADDEDKYRLW
                     FTDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD
                     HQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLG
                     FMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDW
                     FARYRRRLQQDEVSDIERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEAL
                     RNPFSDRDDDYVSRPPDWGKRLEVSCSS"
     gene            complement(15037..15228)
                     /gene="hemP"
                     /locus_tag="RHX79_002324"
     CDS             complement(15037..15228)
                     /gene="hemP"
                     /locus_tag="RHX79_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HDV2197482.1"
                     /translation="MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDH
                     DGQEYLLRKTQAGKLLLTK"
     gene            complement(15360..16406)
                     /gene="aroH"
                     /locus_tag="RHX79_002325"
     CDS             complement(15360..16406)
                     /gene="aroH"
                     /locus_tag="RHX79_002325"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroH"
                     /protein_id="HDV2197483.1"
                     /translation="MNRTDELRTARIESLVTPAELALRYPVTPGVAAHVTDSRRRIEK
                     ILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVG
                     WKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA
                     IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMT
                     IYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR
                     QLEVCEDICQQIRNGSTAIAGIMAESFLREGTQKIVGSQPLTYGQSITDPCLGWEDTE
                     RLVEKLASAVDTRF"
     gene            complement(16563..17396)
                     /gene="ppsR"
                     /locus_tag="RHX79_002326"
     CDS             complement(16563..17396)
                     /gene="ppsR"
                     /locus_tag="RHX79_002326"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="posphoenolpyruvate synthetase regulatory
                     kinase/phosphorylase PpsR"
                     /protein_id="HDV2197484.1"
                     /translation="MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPFTISSITLPFVE
                     NESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQ
                     EMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
                     CGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIR
                     EERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRM
                     Y"
     gene            17729..20107
                     /gene="ppsA"
                     /locus_tag="RHX79_002327"
     CDS             17729..20107
                     /gene="ppsA"
                     /locus_tag="RHX79_002327"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HDV2197485.1"
                     /translation="MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVS
                     VPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQP
                     ELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAV
                     KHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQV
                     VFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHG
                     KQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQ
                     ARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVL
                     VTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENV
                     TVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVG
                     LARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATL
                     GAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFAL
                     ECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIP
                     SNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRA
                     AKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK"
     gene            complement(20164..21810)
                     /gene="fadK"
                     /locus_tag="RHX79_002328"
     CDS             complement(20164..21810)
                     /gene="fadK"
                     /locus_tag="RHX79_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310435.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="medium-chain fatty-acid--CoA ligase"
                     /protein_id="HDV2197486.1"
                     /translation="MKVTLTFNEQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVV
                     DNHGASYTYSALDHAANCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKIGAVS
                     VPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKL
                     APATSSLSLSQIIADNTPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASER
                     AYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQ
                     RCTCMLGATPFVYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQRGIKLLSVY
                     GSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNV
                     FMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVE
                     DILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKY
                     PEHIVVIEKLPRTASGKIQKFLLRKDIMRRLTQDVCEEIE"
     gene            complement(21867..22160)
                     /locus_tag="RHX79_002329"
     CDS             complement(21867..22160)
                     /locus_tag="RHX79_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HDV2197487.1"
                     /translation="MSQNATVNVDIKLGVNKFHVDEGHPHIILAANPDINEFRKLMKA
                     CPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG"
     gene            complement(22157..23446)
                     /locus_tag="RHX79_002330"
     CDS             complement(22157..23446)
                     /locus_tag="RHX79_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDV2197488.1"
                     /translation="MSEDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKN
                     MTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHAS
                     YTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD
                     GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSD
                     GLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEY
                     SAHMVPEGGLAMVPQMVNDGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAA
                     KEREDFSASSLAQYKRELEQSCVMRDMQHFRKIPALIENPRLFSQYPRMVADIMNEMF
                     TIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL"
     gene            complement(23502..24440)
                     /locus_tag="RHX79_002331"
     CDS             complement(23502..24440)
                     /locus_tag="RHX79_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit alpha"
                     /protein_id="HDV2197489.1"
                     /translation="MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAV
                     MPYGPKCIYVLEQNDALQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQL
                     NAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSH
                     QCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAA
                     VLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVI
                     VAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR"
     gene            complement(24460..25224)
                     /locus_tag="RHX79_002332"
     CDS             complement(24460..25224)
                     /locus_tag="RHX79_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein"
                     /protein_id="HDV2197490.1"
                     /translation="MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAA
                     SQLATDDDEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALA
                     AAVEKIGFDLLIFGEGSGDLYAQQAGLLVGEILQLPVINAVSAIQRQGNTLVIERTLE
                     DDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAEL
                     VGIRVPPQTERKHIIIDNDSPEAIAELAEHLKKALN"
     gene            25540..>26059
                     /locus_tag="RHX79_002333"
     CDS             25540..>26059
                     /locus_tag="RHX79_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDV2197491.1"
                     /translation="MYQRCFDNASETLFVAGKTPRLSRFAISDDPKWESGHHVHDNET
                     ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ
                     GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL
                     YYENFKNAYRSEQ"
BASE COUNT         6504 a         6214 c         6776 g         6565 t
ORIGIN      
        1 acatgttttc atgattttta gcggccaaca gtgtgaataa ttgacgttga ctaaaagaat
       61 atttttttgc aaaagtactc agtgttgata tataagataa cacgacgtct ttattaccct
      121 tgctcatggc gatgtataaa gcaggggttc catgtgctag ctttgctcaa cttgtattta
      181 aaggcgatgc cattaatttt agagaggaac cgtgtgacac acaaagggtg attattttcc
      241 attgcggcgt ataatcctgg ctcaccatca tgtattttca tggctaaaat actcatcgcc
      301 agttttttgt ttaaaagctc ttgtgctatt ggagtggtta atgcattcag aaagatatcg
      361 attatttcat cgaatccata caacatggag atataaagtc caggtgtttc gttagcactt
      421 ttagtttgca gtaatttaac cagattatct tcatgaatga tgtgattatc taccagtgac
      481 tgaatttctt gcataaatat tttcacgttg tcagtatgtc tgttcatcat agccaaaaat
      541 aaagcaggtg taccaacgct attctgcgca gttattattt caatgatttc tttttcaggg
      601 agtatgggca actgtttgaa taatgtaata agctgttgag tctggcctgt agccattatt
      661 aacaacattg ccgatggatg tataggggca aatggcattc gtgatgcaat acccgcgaaa
      721 atagcccctg gaactcccac aggtaatagg ggcagaatag caattgcaca gttgcgaaca
      781 tacctatcag cccaggtctg agcatcggga cctgaactga tgaacttatc aagcgaaaga
      841 aagccccgtg ctgtcctgtg ggtgtctctg acggcaacgt tggtatcgtt cgggtcgtaa
      901 acggacacaa catagtttaa ttgtccatac actgactgct ttattcgtag ccttactgac
      961 aaagtatgat tgtctatata taaaatcgcg gacatatgac tgacattgtt tgccatcatt
     1021 cgacaaaaga aaatatctaa agcgaagcca aaatccttac tcgcgataac gcgactccct
     1081 gcaggaggat ggcgaagtaa tgctctgaac tccgcgtccc ggactaaggg gacatgctgc
     1141 tgtatggatt caacggagga gtaatgttta atcaggttga ctttgccttt tccatttctc
     1201 aatgaatcaa gggcgtattg caatgacaga tggcgacaaa aaatagcgtc agaaggagat
     1261 tgcaaaaaac atgcactacc attgagattt actgttgggt gtatagtttt ttctctatgg
     1321 atttttttag acagtttcat acaatggtta cgatcttcag cagttaactg ttcctgttca
     1381 atataatcca gtatgcttcg caaatggtta gctttaatag gcgtggtttc cagtaataag
     1441 gaaatgaaat ctttttatag tgtaatgtaa tgagtatatt ttctgcatgg atgggtgaag
     1501 tggcaaagtt aatggtaaaa agggcagtgg aataacaatt ttgtgatatt tttcgacagt
     1561 ttgcggtaaa ttcctgaata acacagtatg acagcatcga acttaagtca gaggtatcaa
     1621 gtagggtgat gagctggcgc gcaaatttat taataggctc tgatgaaggt gttggtatgt
     1681 cgctatcgat gtgcaatcta tgaggagact tataatgagt tctgataatg atatcgtttt
     1741 gactcataat ctattcgcct tatatatatc tggaggtttt gaggatgatg attaattatt
     1801 atcgccagaa cgaaatgtgc acgaaaaatt gttataagaa ttgtgtcact tttatcattg
     1861 tgatatgacc acttcgtcat taatctcatg agcgtttaaa atactaccgc caaatcacgc
     1921 aacgaacttt gctggattca gtttatgctg ctgtaaatcc gctcgcagta aacctttcag
     1981 acgcaccgtg atgttatcag tggttcttta agcgttttgc tggtgtactc actacaaacg
     2041 aattgcgaat cgaatcaatg tgaaacggaa aggtacaatc tccctttttt tagtgttaac
     2101 atcgctcaac cgggtggaag gtgagaggtt aatgtctttc atttgtgtac ctgattgcga
     2161 accaatttag catttgttgg ctagatggtt tcgcaatgaa ctgttaataa acaaattttt
     2221 ctttgtatgt gatctttcgt gtgggtcacc actgcaaata aggatataaa atgcctgtta
     2281 taactcttcc tgatggcagc caacgccatt acgaccacgc tgtaagcccc atggatgttg
     2341 cgctggacat tggtccaggt ctggcgaaag cctgtatcgc agggcgcgtt aatggcgaac
     2401 tggttgatgc ttgcgatctg attgaaaacg acgcacaact gtccatcatt accgccaaag
     2461 acgaagacgg tctggagatc attcgtcact cctgtgcgca cctgttaggg cacgcgatta
     2521 aacaactttg gccgcatacc aaaatggcaa tcggcccggt tattgacaac ggtttttatt
     2581 acgacgttga tcttgaccgc acgttaaccc aggaagatgt cgaagcactc gagaagcgga
     2641 tgcatgagct tgctgagaaa aactacgacg tcattaagaa gaaagtcagc tggcacgaag
     2701 cgcgtgaaac tttcgccaac cgtggggaga gctacaaagt ctccattctt gacgaaaaca
     2761 tcgcccatga tgacaagcca ggtctgtact tccatgaaga atatgtcgat atgtgccgcg
     2821 gtccgcacgt accgaacatg cgtttctgcc atcatttcaa actaatgaaa acggcagggg
     2881 cttactggcg tggcgacagc aacaacaaaa tgttgcaacg tatttacggt acggcgtggg
     2941 cagacaaaaa agcgcttaac gcttacctgc agcgcctgga agaagccgcg aaacgcgacc
     3001 accgtaaaat cggtaaacag ctcgacctgt accatatgca ggaagaagcg ccgggtatgg
     3061 tattctggca caacgacggc tggaccatct tccgtgaact ggaagtgttt gttcgttcta
     3121 aactgaaaga gtaccagtat caggaagtta aaggtccgtt catgatggac cgtgtcctgt
     3181 gggaaaaaac cggtcactgg gacaactaca aagatgcaat gttcaccacg tcttctgaga
     3241 accgtgaata ctgcattaag ccgatgaact gcccgggtca cgtacaaatt ttcaaccagg
     3301 ggctgaagtc ttatcgcgat ctgccgctgc gtatggccga gtttggtagc tgccaccgta
     3361 atgagccgtc aggttcgctg catggcctga tgcgcgtgcg tggatttacc caggatgacg
     3421 cgcatatctt ctgtactgaa gaacaaattc gcgatgaagt taacggatgt atccgtttag
     3481 tctatgatat gtacagcact tttggcttcg agaagatcgt cgtcaaactc tccactcgtc
     3541 ctgaaaaacg tattggcagc gacgaaatgt gggatcgtgc tgaggcggac ctggcggttg
     3601 cgctggaaga aaacaacatc ccgtttgaat atcaactggg tgaaggcgct ttctacggtc
     3661 cgaaaattga atttaccctg tatgactgcc tcgatcgtgc atggcagtgc ggtacagtac
     3721 agctggactt ctccttgccg tctcgtctga gcgcctccta tgtgggcgaa gacaacgagc
     3781 gtaaggtacc ggtaatgatt caccgcgcaa ttctggggtc gatggaacgt ttcatcggta
     3841 tcctgaccga agaattcgct ggtttcttcc cgacctggct tgcgccagtt caggttgtta
     3901 tcatgaatat taccgattca cagtctgaat acgttaacga attgacgcaa aaactatcaa
     3961 atgcgggcat tcgtgttaaa gcagacttga gaaatgagaa gattggcttt aaaatccgcg
     4021 agcacacttt gcgtcgcgtc ccatatatgc tggtctgtgg tgataaagag gtggaatcag
     4081 gcaaagttgc cgttcgcacc cgccgtggta aagacctggg aagcatggac gtaaatgaag
     4141 tgatcgagaa gctgcaacaa gagattcgca gccgcagtct taaacaattg gaggaataag
     4201 gtattaaagg cggaaaacga gttcaaacgg cgcgccctaa ccgtatcaat ggcgaaattc
     4261 gcgcccagga agttcgctta acaggtctgg aaggcgagca gcttggtatt gtgagtctga
     4321 gagaagctct ggagaaagca gaagaagccg gagtagactt agtcgagatc agccctaacg
     4381 ccgagccgcc ggtttgtcgt ataatggatt acggcaaatt cctctatgaa aagagcaagt
     4441 cttctaagga acagaagaaa aagcaaaaag ttatccaggt taaggaaatt aaattccgtc
     4501 ctggtacaga tgaaggcgac tatcaggtaa aactccgcag cctgattcgc tttctcgaag
     4561 agggtgataa agccaaaatc acgctgcgtt tccgcggtcg tgagatggcg caccagcaaa
     4621 tcggtatgga agtgcttaat cgcgtgaaag acgatttgca agaactggca gtggtcgaat
     4681 ccttcccaac gaagatcgaa ggccgccaga tgatcatggt gctcgctcct aagaagaaac
     4741 agtaaggcct tcaagtagca ctgtctgtgg agccttcggg cttcacaggc tttgttcgcc
     4801 tttgtttcgt ttattaacaa tgcgaagtgg aagttattaa aatgccaaaa attaagaccg
     4861 tacgcggtgc tgctaagcgc ttcaaaaaaa ccggtaaagg tggttttaag cacaagcacg
     4921 ctaacctgcg tcacattctg accaaaaaag cgaccaaacg taaacgtcac ctgcgtccga
     4981 aagccatggt ttccaaaggc gatctgggcc tggtaatcgc gtgcctgccg tacgcataag
     5041 ccgttaacgt ttttaacttt ttaattagaa tatagataca ggagagcaca tatggctcgc
     5101 gtaaaacgtg gtgttattgc acgcgcacgt cacaagaaaa ttttgaaaca agctaaaggc
     5161 tactacggtg cgcgttctcg cgtataccgc gttgccttcc aggctgttat caaagctggt
     5221 cagtatgctt accgtgaccg tcgtcaacgt aagcgtcagt tccgtcaact gtggattgcg
     5281 cgtatcaacg cagcagcacg tcagaacggt atttcttaca gcaaattcat caatggcctg
     5341 aaaaaagcct ctgttgaaat cgaccgtaag atcctggctg atatcgcagt attcgacaaa
     5401 gtagcgttca ccgctctggt tgaaaaagcg aaagcagctc tggcataagc cagttgaaag
     5461 agggagctag tctccctctt ttcgtttcaa cgccatcaaa acattgactt ttatcgccgt
     5521 agccttttca ataaaggtct tttgaagagt accaaaaggt aacgcaagca atgaatgctg
     5581 ctattttccg cttctttttt tactttagca cctgaatcca ggaggctagc gcgtgagaag
     5641 agaaacggaa aacagcgcct gaaagcctcc cagtggaggc tttttttgta tgcgcgtttt
     5701 gaaaaataaa aagcctgtct catcaggtgt aattgtcgca gccagtctgg acacggccag
     5761 cgcggagaaa ccggagcgta tttaagtacg tgagaatttc gagcactgcc cgggaccaaa
     5821 atggcaagta aaatagcctg atgggatagg ctctaagtcc aacgaaccag tgtcaccact
     5881 gacacaatga ggaaaaccat gtcacatctc gcagaactgg ttgccagtgc gaaggcggcc
     5941 attagccagg cgtcagatgt tgccgcgtta gataatgtgc gcgtcgaata tttgggtaaa
     6001 aaagggcact taacccttca gatgacgacc ctgcgtgagc tgccgccaga agagcgtccg
     6061 gcagctggtg cggttatcaa cgaagcgaaa gagcaggttc agcaggcgct gaatgcgcgt
     6121 aaagcggaac tggaaagcgc tgcactgaat gcgcgtctgg cggcggaaac gattgatgtc
     6181 tccctgccag gtcgtcgcat tgaaaacggc ggtctgcatc cggttacccg taccatcgac
     6241 cgtatcgaaa gtttcttcgg tgagcttggc tttaccgtgg caaccgggcc ggaaatcgaa
     6301 gacgattatc ataacttcga tgctctgaac attcctggtc accacccggc gcgcgctgac
     6361 cacgacactt tctggtttga cactacccgc ctgctgcgta cccagacctc tggcgtacag
     6421 atccgcacca tgaaagccca gcagccaccg attcgtatca tcgcgcctgg ccgcgtttat
     6481 cgtaacgact acgaccagac tcacacgccg atgttccatc agatggaagg tctgattgtt
     6541 gataccaaca tcagctttac caacctgaaa ggcactctgc acgatttcct gcgtaacttc
     6601 tttgaggaag atttgcagat tcgcttccgt ccttcctact tcccgttcac cgagccttct
     6661 gcagaagttg acgtcatggg taaaaacggt aaatggctgg aagtgctggg ttgcgggatg
     6721 gtgcatccga acgtgctgcg taacgttggc atcgacccgg aagtttactc tggtttcgcc
     6781 ttcgggatgg ggatggagcg tctgactatg ttgcgttacg gcgtcaccga cctgcgttca
     6841 ttcttcgaaa acgatctgcg tttcctcaaa cagtttaaat aaggcaggaa tagattatga
     6901 aattcagtga actgtggtta cgcgaatggg tgaacccggc gattgatagc gatgcgctgg
     6961 cgaatcaaat cactatggcg ggcctggaag ttgacggtgt agaaccggtt gccggtagct
     7021 tccacggcgt ggtcgttggt gaagtggttg agtgtgcgca gcatccgaac gctgacaaac
     7081 tgcgtgtgac aaaagtgaat gttggcggcg atcgcctgct ggacatcgtc tgcggtgcgc
     7141 caaactgccg tcagggcctg cgtgtggcgg tagctaccat tggtgctgtt ctgccgggtg
     7201 atttcaaaat taaagcggcg aaactgcgtg gtgaaccgtc tgaagggatg ctgtgctcct
     7261 tttctgagct gggaatttct gacgatcata gcggcattat cgagctgcct gcggatgcgc
     7321 cgattggcac cgacatccgt gaatacctga aacttgatga caacaccatc gaaatcagcg
     7381 tgacgccaaa ccgtgccgac tgtttaggta tcattggtgt tgcgcgtgac gttaccgtgc
     7441 tgaatcagct gccgctggtt gaaccggaaa tcgttccggt tggtgcgacc atcgacgaca
     7501 cgctgccgat tacagtcgaa gcgccggaag cctgcccgcg ttatcttggc cgtgtggtaa
     7561 aaggcattaa cgttaaagcg ccaactccgc tgtggatgaa agaaaaactg cgtcgttgcg
     7621 ggatccgttc tatcgatgca gttgttgacg tcaccaacta tgtactgctc gaactgggcc
     7681 agccgatgca cgctttcgat aaagatcgca ttgaaggcgg cattgtggtg cggatggcga
     7741 aagagggcga aacgttggta ctgcttgatg gcactgaagc gaagctgaat gctgacactc
     7801 tggtcatcgc cgaccacaac aaggcgctgg cgatgggcgg catctttggt ggcgaacact
     7861 ctggcgtgaa tgacgaaacg caaaacgtct tgctggaatg cgctttcttc agcccgctgt
     7921 ctatcaccgg tcgtgctcgt cgtcatggcc tgcatactga tgcgtctcac cgttatgagc
     7981 gtggcgttga tccggcactg cagcacaaag cgatggaacg tgcgacccgt ctactgatcg
     8041 acatctgcgg tggtgaggct ggtccggtaa ttgatatcac caacgaagca acgctgccga
     8101 agcgtgcaac catcacttta cgtcgtagca aactggatcg cctgatcggc catcatattg
     8161 cggatgagca ggtaactgac attctgcgtc gtctcggctg cgaagtgacc gaaggcaaag
     8221 acgagtggca ggcagttgcg ccgagctggc gtttcgatat ggagattgaa gaagatctgg
     8281 tcgaagaagt cgcgcgtgtt tacggctaca acaacatccc ggatgagccg gtacaggcaa
     8341 gcctgattat gggtactcac cgtgaagctg acctgtcgct caagcgcgtg aaaacgctgc
     8401 tcaacgacaa aggctatcag gaagtgatca cctacagctt cgttgatccg aaagtgcagc
     8461 agatgatcca tccaggcgtt gaagccttac tgctgccaag cccgatctct gttgaaatgt
     8521 cagcaatgcg tctttctctg tggaccggcc tgctggcaac cgtggtgtac aaccagaacc
     8581 gtcagcagaa ccgtgtgcgc attttcgaaa gcggtctgcg tttcgtacca gatactcagg
     8641 caccgttggg cattcgtcag gatctgatgt tagccggtgt gatttgcggt aaccgttacg
     8701 aagagcactg gaacctggca aaagagaccg ttgatttcta tgatttgaaa ggcgatcttg
     8761 aatccgttct cgacctgacc ggtaaactga atgaggttga gttccgtgca gaagcgaatc
     8821 cggcactgca tccggggcaa tccgcagcga tttatctgaa aggtgaacgt attggttttg
     8881 ttggggttgt tcatcctgaa ctggaacgta aactggatct taacggtcgc actctggtgt
     8941 tcgaactgga gtggaacaag ctcgcagacc gcgtggtgcc tcaggcgcgc gagatttctc
     9001 gcttcccggc gaaccgtcgt gacatcgcgg tggtggtcgc agaaaacgtt cccgcagcgg
     9061 atattttatc cgaatgtaag aaagttggcg taaatcaggt agttggcgta aacttatttg
     9121 acgtgtaccg cggtaagggt gttgcggagg ggtataagag cctcgccata agcctgatcc
     9181 tgcaagatac cagccgtaca ctcgaagaag aggagattgc cgctaccgtc gccaaatgtg
     9241 tagaggcatt aaaagagcga ttccaggcat cattgaggga ttgaacctat ggcgcttaca
     9301 aaagctgaaa tgtcagaata tctgtttgat aagcttgggc ttagcaagcg ggatgccaaa
     9361 gaactggttg aactgttttt cgaagagatc cgtcgcgctc tggaaaacgg cgaacaggtg
     9421 aaactctctg gttttggtaa cttcgatctg cgtgataaga atcaacgccc gggacgtaac
     9481 ccgaaaacgg gcgaggatat tcccattaca gcacggcgcg tggtgacctt cagacccggg
     9541 cagaagttaa aaagccgggt cgaaaacgct tcgcccaaag acgagtaatc tgatctaact
     9601 aaaaaggccg ctctgcggcc ttttttcttt tcactgtcga agagtcaccg taaaatcaac
     9661 gccatgacac ttcagcagaa cggataccat gctgacactt gcccgccaac aacagcgaca
     9721 aaatattcgc tggttattat gcctgtcagt tttgatgctg ctggcgcttc tcttaagcct
     9781 ttgcgccggt gaacaatgga tctcgccagg tgactggttt tctcctcgtg gcgaactgtt
     9841 cgtctggcag attcgcctgc cacgtacgct ggctgtattg ctggttggtg cggcgctggc
     9901 tatatccggc gcagtaatgc aggcgttgtt tgaaaatcct ctggcagaac ctggactact
     9961 tggcgtctct aacggcgcag gcgtagggct tatcgccgcg gtattgcttg ggcaagggca
    10021 actcccaaac tgggcactag ggctgtgtgc gattgctggc gcgcttatca tcactttaat
    10081 actcttacgt ttcgcccgtc gtcatctttc gaccagtcgg ttattgctgg ctggcgttgc
    10141 attagggatt atctgtagcg cactaatgac gtgggctatc tacttttcca cctctgttga
    10201 tttacgtcag ctgatgtact ggatgatggg cggttttggc ggcgtagact ggcggcaaag
    10261 ctggctgatg ctggcattga tccccgtgtt gttgtggatc tgttgtcagt ccaggccgat
    10321 gaatatgtta gcacttggcg agatctcggc gcggcaactg ggtttacccc tgtggttctg
    10381 gcgcaatgtg ctggtggcag cgaccggctg gatggttggc gtcagtgtgg cgctggcggg
    10441 tgctatcggc tttattggtc tggtgatccc acatattctt cggttgtgtg gtttaaccga
    10501 tcatcgcgta ttacttcccg gctgcgcgct ggcaggggcg agcgcattgc tgctggccga
    10561 tgttgtagcg cgcttggcat tagctgccgc agagctgcct attggcgtgg tcaccgcaac
    10621 gttgggtgcg ccggtgttta tctggttatt gttaaaagca ggacgttagc cgcaaaaaga
    10681 cggtctatga ttaaaagcta agatttttac tgaccacacc caggagaaac gatgcaagat
    10741 tccattctga cgaccgtagt gaaagatatc gacggtgaag tgaccacgct ggagaagtac
    10801 gccggtaatg tgctgttgat tgtcaatgtc gcctcaaagt gtggcttaac gccgcaatat
    10861 gagcagttgg agaatattca gaaagcctgg gccgatcgag gttttgtggt gctgggattc
    10921 ccgtgcaacc agtttctgga acaagaaccg ggcagcgatg aagagattaa aacttactgt
    10981 accaccacat ggggggtgac gttcccgatg ttcagtaaga ttgaagttaa tggcgaagga
    11041 cgccatccgc tgtatcaaaa attgattgcc gcagcgccga ccgcagtcgc gccggaagag
    11101 agcggattct atgcccgtat ggtcagcaaa ggtcgtgcac cgctgtaccc tgatgatatt
    11161 ttatggaatt ttgagaaatt tttagttggc agggacggat tggtcatcca gcgtttttcc
    11221 ccggatatga cgccggaaga ccccattgtg atggaaagca ttaaactggc gttggcaaaa
    11281 taatgtctat tgtgatgcag ttacaggatg ttgcggaatc tacccgcctg gggccacttt
    11341 ctggcgaggt tcgggctggg gagatcctgc acctggtggg gccgaatggc gcgggtaaga
    11401 gtaccttgct tgcacgaatg gccggaatga ccagcggtaa gggaagcatt cagttcgcgg
    11461 ggcaacccct ggaagcatgg tccgcaacaa aactcgcgct gcatcgcgcc tatctttcac
    11521 aacagcagac gccgccgttt gcaatgccgg tctggcacta cctgacactg catcagcacg
    11581 ataaaacgcg taccgaacta ctgaatgatg tcgcaggggc gctggctctt gatgacaaac
    11641 tcggacgtag caccaatcaa ctttccggcg gtgaatggca acgcgtacgt cttgctgcgg
    11701 tggtgctgca aatcacacca caagccaatc ccgcaggtca attgctgctt cttgatgagc
    11761 cgatgaacag tcttgatgtt gcgcaacaaa gtgcgttaga caaaattctg agcgctctgt
    11821 gtcagcaagg actggcgatt gtgatgagca gtcacgatct caaccacaca ttgcgtcatg
    11881 cgcatcgggc gtggttgcta aaaggtggaa aaatgctggc cagtggacgc agagaagagg
    11941 tgctcacgcc gccaaatctg gcgcaggcct atgggatgaa ttttcgccgt ctggatatcg
    12001 aaggtcacag aatgctgatt tcgaccatct gatttcatta gtatcttgaa aatcgggtaa
    12061 ttacgacgct aaattaatgc aagaataaaa aacagaggaa ccgtacggaa tgcgtttctg
    12121 ccttattttg atcacagcac tgtttctggc cgggtgtagc caccataaag caccgccgcc
    12181 aaatgccaga ctttctgatt cgattaccgt tattgccggt ttgaacgacc agctacaaag
    12241 ctggcatggc acgccgtatc gttatggtgg catgacgcgg cgcggtgtgg actgttcggg
    12301 atttgtggtt gtaacgatgc gcgatcgttt cgatttgcag ctgccccgag aaaccaaaga
    12361 acaagcctct atcggcacgc aaattgataa agacgagttg ctgcctggtg acctggtctt
    12421 tttcaaaacg gggtccggac aaaatggttt gcatgtaggt atttacgata ccaacaacca
    12481 atttatccac gcctctacca gcaagggagt gatgcgttcc tcacttgata atgtctattg
    12541 gcagaaaaat ttctggcagg cgagacgaat ctagtatgtc gaaaaatgga cggcgatgat
    12601 acatcgccgt ccatttactc ctgaatacag tagtattttg cagacaaaaa ttccgtaaat
    12661 ggattattcg tttataatca ggataatcta aaaaaaggac ccctgaaaaa gtggttaaca
    12721 tggaacaaat gaaagttact ccttctgtaa ttgttatgtc ttatggcctc atccctttta
    12781 gccggatact gaaaaacatc cttcgagagg gacggttacc atgaagattt ttttggagaa
    12841 tctttatcat tctgattgct atttcctgcc gataagagat aaccagcaac tccttgtcgg
    12901 cgttgagtta attacccatt tctccagtga agatggcacg gtgcgtatcc cgacgagtcg
    12961 ggttatagcg caacttaccg aggagcaaca ttggcaatta ttttcagagc agttggaatt
    13021 actaaaatca tgccaacatt tttttattca acataaactc tttgcctggc ttaatttaac
    13081 gccacaagtg gctacattat tattagagag ggataattac gcaggcgaac tattaaaata
    13141 tccgtttatt gaactgttga ttaatgagaa ttacccgcat ctcaatgaag gaaaagataa
    13201 tcgcgatctt ttatccttat cgcaaatgta tccccttgtg ttaggcaatt tgggagcagg
    13261 taatagcaca atgaaagcgg tttttgatgg tcttttcacc cgcgtcatgc tggataaaag
    13321 ttttattcag caacaaatca cgcatcgctc cttcgaaccg tttattcgtg cgatccaggc
    13381 gcaaatttcc ccttgttgca attgcatcat cgcggggggc attgatacga cagaaatatt
    13441 ggcacagatt acccccttcg atttccatgc tctccaggga tgcctgtggc ctgccgttcc
    13501 tataaatcag ataacgacgt tggttcagcg ataaccctcc tgtttgctgg tgtttaagac
    13561 gagagtaacc gtctacacta tcaaacagga ggatctatga ccctgtcttt tattacccgc
    13621 tggcgcgatg aattgccaga aacctataca gcactttccc ctacgccttt aaataatgcc
    13681 cggctgattt ggcataatac cgaactcgct aacacgctga gtattccatc gtcgctgttt
    13741 aaaaatgctg caggtgtctg gggcggcgaa accctactgc ctggtatgtc accactggcg
    13801 caggtttaca gtggtcatca gttcggcgtc tgggcgggcc aactgggtga tgggcgcggc
    13861 attttacttg gcgaacaact gcttgctgat ggcactacaa tggactggca tctgaaaggt
    13921 gctggcctga cgccttattc gcgaatgggt gatggacggg cggttttacg ttcgacgata
    13981 cgagaaagtc tcgccagtga ggcgatgcat tatctgggca ttccgacgac ccgcgcgtta
    14041 agtatcgtca ccagcgattc gccagtgtat cgggaaacgg tggagccagg cgcgatgctg
    14101 atacgtgtgg caccaagtca tctgcgcttt ggtcatttcg aacattttta ctatcgccgc
    14161 gagccggaaa aggttcgtca gttagctgac tttgccattc gtcattactg gtcacatctt
    14221 gcagatgatg aggacaaata ccgtctctgg tttaccgatg ttgtcgcacg taccgcatcg
    14281 ttaattgccc aatggcagac ggtcggcttt gctcatgggg tgatgaatac cgacaacatg
    14341 tcgctgctgg ggctgacgct tgattacggg ccgtttggtt ttcttgatga ttacgaaccc
    14401 ggttttattt gtaatcactc ggatcatcaa gggcgttata gctttgataa tcaacctgct
    14461 gtcgcgttgt ggaatttaca gcgtctggcg cagacattgt caccatttgt tgccgtagat
    14521 gccctgaatg aggccctgga cagctatcag caggttttgt tgacgcatta tggacaacgg
    14581 atgcggcaga aactgggctt catgacggag caaaaagagg ataacgcgct actgaatgaa
    14641 ttattcagtc tgatggcgcg agagcgcagc gattataccc gcacattccg catgctgagt
    14701 ctgaccgagc agcacagcgc ggcgtcaccg ctacgtgatg agtttattga tcgtgcggca
    14761 tttgatgact ggtttgcccg ttatcggagg cgtttgcaac aagacgaggt tagcgatatt
    14821 gagcgtcagc aactgatgca aagcgttaac ccagctctgg tgttgcgcaa ctggttggcg
    14881 caacgggcga ttgaagcggc agaaaagggt gatatgacgg aattgcaccg cctgcatgag
    14941 gcgttgcgaa atcctttcag cgacagagat gatgactatg tcagtcgtcc acctgactgg
    15001 ggtaaacggc tggaagtcag ctgctcgagt taaaggctac ttagttaaca gcagcttgcc
    15061 agcctgagtt ttacggagca gatattcttg cccgtcatga tcgataatca gtttgccatc
    15121 cggacctaac agtgtctggc tggaaattcg ccgaataggc tgcggggaag cggtcttgtg
    15181 attggcatcc gtttcaggcg tgagttttct gctatccgta taacgcataa aaattaataa
    15241 tagttgatat aacaatgatt cttattatca atattatggc taaccagagc aagcagtaat
    15301 gtgctgagaa gacaacaagt tgcgcagaaa tgcccatccc atcaggaatg ggcacgcatt
    15361 cagaagcggg tatctaccgc agaggcgagt ttttcgacca ggcgttcggt atcttcccag
    15421 cccagacacg ggtcggtaat ggattgaccg taagtgagcg gctgactgcc gacgattttt
    15481 tgcgttcctt cgcgcaggaa actttccgcc ataattccag caatcgccgt agagccattg
    15541 cggatttgct gacaaatatc ctcacaaact tctaactggc gacggtgctg cttctggcag
    15601 ttaccgtggc tgaaatccac caccagatgt tcaggtaaat caaactcgtg cagcgtatcg
    15661 caggctgcgg cgatatcatc ggcatgataa ttcggttttt tgccgccacg cataataatg
    15721 tggccatacg ggttgccgct ggtctgatag atggtcatct gaccattttt gtctggcgag
    15781 aggaacatat ggctggcgcg ggctgcgcgg atagcatcca cggcaatccg cgtgttgcca
    15841 tcggtaccat ttttaaaacc taccggacag gagagtgccg aagccatttc acggtggatc
    15901 tgactttcgg tagtacgtgc gccaatcgcg ccccaactga ttaaatcagc aataaactga
    15961 ccggtcacca tatcgaggaa ctcagtcgcg gtagggacac ccagctcatt tacctgtaaa
    16021 agtaatttgc gcgccagctc cagaccgtga tttacccgat agctgccgtt taaatccgga
    16081 tcggagatta gccctttcca gccgacaaca gttcgtggtt tttcaaaata ggtgcgcatt
    16141 acgatttcca gccgtgactg gtactggttg cgcagcgact gcagacgggt ggcgtactcc
    16201 attgcagcgg tgagatcgtg gatcgagcag gggccaataa taaccaacag tcgcttatct
    16261 tcaccattca gtattttttc aattctgcgg cgggagtcgg tgacatgggc ggcgacgcca
    16321 ggcgttacgg gataccgtag cgcgagttcg gcgggcgtta ccaggctctc aatacgcgca
    16381 gtacggagtt cgtcagttct gttcattaca agtctcagaa atttgttgct tctacggcag
    16441 gactgccggg aagtgatgcg catcacgata aaccaatcgc tgctgatttc aagtgcgagg
    16501 tgtgtcacac ctcgccgggt ggttagcatg ataacaaaaa aataagctaa tgcactagtt
    16561 ctctagtaca ttcggcgact aaggcccatg atatcgagga tcttggtggc aatctcttct
    16621 accgaataat tggtactgtt aatccacggg atctgatttt tacggtacaa cgcttccact
    16681 tccgcgactt ccatcctgca ctgacgaagc gaggcatagc gactgttctc ccgacgttcc
    16741 tcgcgaatcg ccgccagacg ttccgggtcg atagtcaggc cgaacaattt gtgctgaagc
    16801 ggtttgagcg acgcgggtag caccagatta tccatatcgt cggcaataaa ggggtagttt
    16861 gccgcgcgga taccaaattg cattgccaga tacagactgg tgggggtttt accacagcga
    16921 gaaacgccga gcaggatcac ctgagcctgg tccagattgc gcaacgaaat accgtcatcg
    16981 tgggcaaggg tgtaatcaat cgccgcaatg cgcgcatcat atttattgag attattaggg
    17041 ttaaggccat gggtacgatg agcaatcggc gttggatcca gtttcatctc ttgttgtagc
    17101 ggggcaacca gcgcctgaac gatatcctgg caaaagcctt cactttgcaa gatgatggcg
    17161 cgaatctccg gcaacacgat ggagtagaag accagcgggc gcacacctgt ctggtgataa
    17221 attgcgtcaa tctgatcctt cactgcccgt gcacggctct cattttcgac aaacggcagc
    17281 gtaatgctgc tgatagtgaa gggaaattgt gacattactg cgtgtcctaa tacctccgca
    17341 gttattgccg taccatcaga aatataaaaa acgtggcgat caacagcatt atccattttg
    17401 ttcttcccgt gatgcagaca taattctatg aaagcataaa ttaaaaacgc acagaagcgt
    17461 aggacgtaat gtctggttta taaaatgaac cttcaatttt attttttatg aaaacagcat
    17521 ttcattttta tggtttcgtt tataccgatg gtttatgtgg aaattgtcga atagagcagg
    17581 tttgcgcaac gctgggatca gtcttaaaaa gtaaaaaaat atatttgctt gaacgattca
    17641 ccgttttttt catccggtta aatatgcaaa gataaatgcg cagaaatgtg tttctcaaac
    17701 cgttcattta tcacaaaagg attgttcgat gtccaacaat ggctcgtcac cgctggtgct
    17761 ttggtataac caactcggca tgaatgatgt agacagggtt gggggcaaaa atgcctccct
    17821 gggtgaaatg attactaacc tttccggaat gggtgtttcc gttccgaatg gtttcgccac
    17881 aaccgccgac gcgtttaacc agtttctgga ccaaagcggc gtaaaccagc gcatttatga
    17941 actgctggat aaaacggata ttgacgatgt tacccagctt gcgaaagcgg gcgcgcaaat
    18001 ccgccagtgg attatcgaca ctcccttcca gcctgagctg gaaaatgcca tccgcgaagc
    18061 ttatgcacag ctttccgccg atgacgaaaa cgcctctttt gcggtgcgct cctccgctac
    18121 tgcagaagat atgccggacg cttcctttgc cggtcagcag gaaaccttcc tcaacgttca
    18181 gggttttgac gccgttctcg tggcagtgaa acatgtattt gcttctctgt ttaacgatcg
    18241 cgccatctct tatcgtgtgc accagggtta cgatcaccgt ggcgtggcgc tctccgccgg
    18301 tgttcaacgg atggtgcgct ctgacctcgc atcttctggc gtgatgttct ccattgatac
    18361 cgaatccggc tttgaccagg tggtgtttat cacttccgca tggggccttg gtgaaatggt
    18421 cgtgcagggc gcggttaacc cggatgagtt ttacgtccat aaaccgacac ttgcagcgaa
    18481 tcgcccggct atcgtgcgtc gcaccatggg gtcgaaaaaa atccgcatgg tttacgcgcc
    18541 gacccaggag cacggcaagc aggttaaaat cgaagacgta ccgcaggaac agcgtgacat
    18601 cttctcgctg accaacgaag aagtgcagga actggcaaaa caggccgtac aaattgagaa
    18661 acactacggt cgcccgatgg atattgagtg ggcgaaagat ggccacaccg gcaaactgtt
    18721 cattgtgcag gcgcgtccgg aaaccgtgcg ctcacgcggt caggtcatgg agcgttatac
    18781 gctgcattca cagggtaaga ttatcgccga aggccgtgct atcggtcatc gcatcggcgc
    18841 gggtccggtg aaagtcatcc atgacatcag cgaaatgaac cgcatcgaac ctggcgacgt
    18901 gctggtcact gacatgaccg acccggactg ggaaccgatc atgaagaaag catctgccat
    18961 cgtcaccaac cgtggcggtc gtacctgtca cgcggcgatc atcgctcgtg aactgggcat
    19021 tccggcggta gtgggctgtg gtgatgcaac agaacggatg aaagacggtg agaacgtcac
    19081 tgtttcttgt gccgaaggtg ataccggtta cgtctatgcg gagttgctgg aatttagcgt
    19141 gaaaagctcc agcgtagaaa cgatgccgga tctgccgttg aaagtgatga tgaacgtcgg
    19201 taacccggac cgtgctttcg acttcgcctg cctgccgaac gaaggcgtgg gccttgcgcg
    19261 tctggaattt atcatcaacc gtatgattgg cgtccaccca cgcgcactgc ttgagtttga
    19321 cgatcaggaa ccgcagttgc aaaacgaaat ccgcgagatg atgaaaggtt ttgattctcc
    19381 gcgtgaattt tacgttggtc gtctgactga agggatcgcg acgctgggtg ccgcgtttta
    19441 tccgaagcgc gtcattgtcc gtctctctga ttttaaatcg aacgaatatg ccaacctggt
    19501 cggtggtgag cgttacgagc cagatgaaga gaacccgatg ctcggcttcc gtggcgcggg
    19561 ccgctatgtt tccgacagct tccgcgactg cttcgcgctg gagtgtgaag cagtgaaacg
    19621 agtgcgcaac gacatggggc tgaccaacgt tgagatcatg atcccgttcg tgcgtaccgt
    19681 agatcaggcg aaagcggtgg ttgaagaact ggcgcgtcag gggctgaaac gtggcgagaa
    19741 cgggctgaaa atcatcatga tgtgtgaaat cccgtccaac gccttgctgg cagagcagtt
    19801 cctcgaatat ttcgacggct tctcaattgg ctcaaacgat atgacgcagc tggcgctcgg
    19861 tctggatcgt gactccggcg tggtgtctga actgttcgat gagcgcaacg atgcggtgaa
    19921 agcattgctg tcgatggcta tccgtgccgc gaagaaacag ggcaaatatg tcgggatttg
    19981 cggtcagggt ccgtccgacc acgaagattt tgccgcatgg ttgatggaag aggggatcga
    20041 tagcctgtct ctgaatccgg acaccgtggt gcaaacctgg ttaagcctgg ctgaactgaa
    20101 gaaataaaat aaatacccgg cggcgttttg tcgccgggtt tatgtgatcc ccgaagatga
    20161 aacttattca atctcttcac agacatcctg cgttaatcgc cgcataatat cttttcttaa
    20221 caaaaacttt tgtattttac ctgaggcagt gcgcggtagt ttttcgatta ccacgatatg
    20281 ttcaggatat ttatattttg cgacccgttt acggctaaaa aaagccacca cctcttccag
    20341 cgataatgaa tgatgcggcg ctttcagcac gacataagcg catgatcgtt cacctaaacg
    20401 ttcatcgggc attgcaacca cacaggcatc gtgaatttta ggatgctgca ataaaatatc
    20461 ttccacttca cggctgctaa tattttcgcc gccgcggaca ataatatctt ttttgcgtcc
    20521 ggtaattttt atatagccag cctcatccat acggcagaga tcgccgctgt aataccagcc
    20581 ttcttcgtcc agcgcacggg cggttaattc aggttcatca aaatacccca taaacacatt
    20641 ggggccacgc gaggcttctt caccttcgca acctggcggt aaggtcttgc gtgcgtcatc
    20701 gaccacttta atctctacac ctgcggcagc gtaaccatcg gtgtgcataa agcgcgacaa
    20761 aggatcatcg agattcacca ccgcatgcgg cgaactttct gtggaaccat aaacacttaa
    20821 taatttaatg ccgcgctgct ggcattcacg cgccactttt ttggggattg tggtaccgcc
    20881 gcaaagaaag aagcgcagcg ctgaaaggtc tgcgggttgt ttctctagta aattcaaaag
    20941 atcatagaca aacggcgttg cgccgagcat acaggtgcaa cgctgctgct caagcagcgc
    21001 gagacacgca tcaggagtga aaatatctaa caacacgctg cgagcaccaa tcaaaaatgg
    21061 tgctgttacg ccatgcagaa agcccgttgc gtggccgagt ggcgcaggca tcataaagac
    21121 atcctgccag gtcagattca gccgcgcgca ataagcccgc tcactggcga gaatattgtt
    21181 atgcgttagc atcacgccct ttggcagacc ctcggttccg gaggtaaaca gcaccgcagc
    21241 taattcatcg ccgtgggtcg ttatcgccgt ggtcagtggg gtattgtcgg cgataatctg
    21301 acttaatgag agggaagagg tggcgggagc cagtttgtcc acgccgacaa tttgttgtag
    21361 ttgtggaagc tgattttgca gcggcaggat taaatctacc ggacgcgttt gtttaaacaa
    21421 cgtcggtgca aagaacattt ttgcctgaca cttattgagc acccatacca gttctgcttc
    21481 ccgccaggaa ggcaacagcg gtacggaaac cgcaccgatt ttcaggcatg caagatagat
    21541 aacagtaaat tcacaccagc caggcagttg aaatgcgatg cgatcgcctg attcaatacc
    21601 cttcgctaac atccagtttg ccagacagtt cgcggcgtga tcgagcgcgc tataggtgta
    21661 cgatgctcca tgattatcga ccacggcaat tttgtctggc atcgcacgag cggtctgctg
    21721 ccagtaatcg gccagcgaag catcgcccca tagcccttgc tgacgatacg ccgcacgacg
    21781 ttgttcgttg aacgttaatg tcactttcat gttggactct cgaaacagaa catcaggccc
    21841 gagatgcggg cctgtgggat gcatgattag ccgtagcgaa aatcaatacc gaaggtgcct
    21901 gcgggatatt gccactgttc gagaatagtg ttaccgcaca gcacccgaca ggtgccgcac
    21961 tccagacaac cggcagaatc aaaatgaatg ttgccggcgt catcctgctt ataaagtccg
    22021 gcagggcagg ctttcattaa tttacggaat tcattgatat cgggatttgc cgccagaatg
    22081 atatgcgggt ggccctcatc aacatggaat ttattgacgc ctaatttgat gtcgacgtta
    22141 accgtagcgt tctggctcat agcgcggttg ctcccttaat gccatctttc agcaagttga
    22201 tcagcccaat tttcttcgca tgtcccatga tcattttgcg taccggctgg tttggtttgc
    22261 cgtcaatggt gaacatctcg ttcatgatgt cggcgaccat tcgtgggtat tggctaaaca
    22321 ggcgcgggtt ttctatcagc gccgggatct tgcggaaatg ctgcatatcg cgcatgacgc
    22381 agctttgttc cagctcacgt ttgtattgcg ccagactgct ggcggagaaa tcctcgcgtt
    22441 ctttggcggc gatcaccgtt gtggcggcag cctgagccga tgcaatggct aaatccatgc
    22501 cacgaactgt aaaacccaaa ttcaggcaga agcctgcggc gtcaccaacg atcatcacgc
    22561 catcgttaac catctgcggc accattgcca gaccgccttc tggcaccata tgcgcggaat
    22621 attcaagcag tttgccgccg ctaattagtg ggcgaatggc ggggtgttgt ttaaaatctt
    22681 ccagcatttg cggcacgctt ttttgcgcat gggcgatatc acccaatcca caaaccagcc
    22741 ccaaggatat ggaatccttg ttggtataga gaaatccccc gcccatcagg ccgtcagaag
    22801 gggaaccggc aaacagccag gcggcacctt cctcgcccgt aatattaaag cgatcgttga
    22861 tctgttctgg tgtgaggcca ataacctctt taacaccaac agcgtaatga tgcggatcgg
    22921 aagcgggaac cattcccagc gagcggccaa gcatcgagtt aacgccatca gccagaatca
    22981 ccacattcgc ttcgagaata tcatccccag cctgcacgcc agtgaccttg tttccttcac
    23041 gaaccagcgc atcgacgcga acgcctggga taaactgcgc gcccgcctgc tcggcttgtt
    23101 ccatcaacca cgggtccaga cgattacgca atacggtata agatgcgtgt tgcggaacat
    23161 ctggttgctc gcggtgaaaa tcgagggtaa cggcgctttc ttcggttaag aaggagattt
    23221 tctcgcgtgt gaccttgcgt tctaccggcg ctgatactgc aaagcctgga atgattgctt
    23281 caagtgtgtg ggcataaaga cgcccgccgg tcatgttttt acatccggca ctgtcgccgc
    23341 gttctatcac caggacatcc agcccggctc gcgccatgac cagtgcggca acgctaccag
    23401 caacgcccgc accgaccaca atggcatcaa atttgtcttc cgacatgcgt tatgctccct
    23461 tcccgctgcg tttacagcgg gagatgtggt tgaaagggga attagcggct caactggcta
    23521 atcagggcag ggacgacttt gtagatatcg cccaccagac cgtagtcggc ataattgaag
    23581 attggcgcat ttttatcttt attgatggcg acaatcactt ttgcgccgtt gccgccaacc
    23641 atatgctgga tctgcccgga gatccccagc gtcaggtaga gatcggattt cagcaacacg
    23701 ccggagacac cgatataacg ttcacgctcc atccagttct cgccttcggc aattggacgt
    23761 gaacagccga cttcagcatt cagcaccgcc gccagttcgt ggaccatttt caggtcatcc
    23821 tgcgccgcca gaccacgacc gacgccaacc acacgttttg ctttgctcag gtccacgctg
    23881 cttgcggctt tcgcacggcg ttcgcgacag agaatttcat gacgcggagc aacataaggt
    23941 accgtttctg tcgggcactg atgagaggta tcactggtgc acggttcctg aacaccgggt
    24001 gcaagggtaa tgatcgccag cgggctgttg atcttttcct gagcgaacgc taacccgcca
    24061 tacatccggt gttcggcgca aatgtgacca tcgacaatat ccaccgccgt ggcatcattc
    24121 accagcgccg cattcagttg cacacttaac cgtgctgcca gagctttacc acgtttcgtc
    24181 gcggccaaca gcaacatagc ggggtgttta tctttcagca gggcagcaat gctttcggcg
    24241 taattttcag tgcgttgcag cgcgtcgttt tgctcaagaa cataaataca ttttggacca
    24301 taaggcataa ctgcctgcgc ctggtcggta ttttgtacaa tggcatacac ctgttggccc
    24361 cattgctgag cgccgccaaa cagttcagca taacgttcag gattatcgct aaagacccag
    24421 acgctgttta attgactcat cgtttcttct ccgtaggctt cagttcaggg ctttcttcag
    24481 atgttccgcc agctcggcaa tggcctccgg cgaatcgtta tcgataatga tgtgcttacg
    24541 ttctgtttgc ggcggtacgc gaatgccgac cagttcagca agtggcgcgc tctggctcca
    24601 gtcaatatca cttgcctgcc actgatttac cggtttttta cccgcgccga gaatggcttt
    24661 catcgaagga atgcgtggca cgttaatatc ggaggtgacg cagagcacgg ctggaacaga
    24721 gagttcaata acttcaacat catcttcaag cgtgcgttca atcaccagtg tattgccctg
    24781 acgctgaata gcactcactg cattaatcac cggaagttgc agaatttctc cgaccagcaa
    24841 gccagcctgc tgggcataaa ggtcgccgga accttcacca aagatcagta aatcgaagcc
    24901 gatcttttca actgctgctg ccagcgcttt tgcggtatcg agaggcagtg catgttcaag
    24961 ttgcgcatcc tgcaccaaat acaggctgtg cggcccgcgg gatagcacgt ctttgcgcac
    25021 tttcgagttc tgcaacaatg agccgccaac ggtcagcgcg gctatctcat cgtcatctgt
    25081 tgcaagctgg cttgcagctt caatggcatt gagatcgaac tggctgattt tggcgtcggc
    25141 attgtcgaaa ttcagggtgt attctggagt gacaacaatg tcctgttctt caggcaccag
    25201 cttaaagcag gttattattt tcatgatttc tcctgtgagt cgcatacgga accatctccg
    25261 atggaaggta aaaatggcct gaaaatagtg tgcgatagcg gtgcggggtt ttcgacggag
    25321 caagctgttt tccttgccaa caatcttgca aaaaaaatgc gatcgctaaa acaaaagtgc
    25381 aatttgcggc aatatagtta ttccatgacc gtacaatctt gcattcagtg taaataatct
    25441 tgtttagctc tcgctaaacg cggttgtata accgcaatac acgccgtatt ttatccggca
    25501 tatattgttt ttgcttgctc atggaatagg gaggttgtca tgtatcaacg ctgttttgat
    25561 aatgccagtg aaacgctgtt tgtcgccggt aaaacgccac ggctttcacg ttttgcaatt
    25621 agcgatgatc caaaatggga gtctggacat cacgttcatg acaatgaaac cgagctgatt
    25681 tacgtcaaga aaggggtagc aaggtttacc atcgattcat cgttatatgt cgcacatgcc
    25741 gatgatatag tggtgataga acgcggcagg ctgcatgcgg tggcctctga cgttaacgat
    25801 ccggcaacga cgtgtacctg tgcgctgtac ggctttcagt ttcagggggc tgaggaaaat
    25861 cagctactgc aaccgcattc ttgtccggta attgccgcgg ggcagggaaa agaagtcata
    25921 aaaaccttat ttaatgagct aagtgtgatt ttgccgcaaa gtaaaaatag ccaaacatct
    25981 tcgttatggg atgcatttgc ctatacgtta gccattcttt actacgaaaa ctttaaaaat
    26041 gcttatcgtt cggagcagg
//
LOCUS       DAPGWB010000059        25499 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.059, whole genome shotgun sequence.
ACCESSION   DAPGWB010000059 DAPGWB010000000
VERSION     DAPGWB010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 25499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25499
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.059"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(169..2130)
                     /gene="topB"
                     /locus_tag="RHX79_002334"
     CDS             complement(169..2130)
                     /gene="topB"
                     /locus_tag="RHX79_002334"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDV2197492.1"
                     /translation="MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGH
                     LLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAG
                     DPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCV
                     SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA
                     KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIV
                     TSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR
                     YLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSA
                     INLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRALL
                     GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ
                     DKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMAT
                     RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGG
                     SADKKKAAPRKRSAKKSPPADEAGSGAIA"
     gene            complement(2135..3178)
                     /gene="selD"
                     /locus_tag="RHX79_002335"
     CDS             complement(2135..3178)
                     /gene="selD"
                     /locus_tag="RHX79_002335"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDV2197493.1"
                     /translation="MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLV
                     GNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMA
                     IAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE
                     RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFAN
                     IEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYDAIPKLPGVEEYIKLGAVPGGTER
                     NFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKTTAAEFGIELTAIGEL
                     VPARGGRAMVEIR"
     gene            complement(3295..3846)
                     /locus_tag="RHX79_002336"
     CDS             complement(3295..3846)
                     /locus_tag="RHX79_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H nitroreductase"
                     /protein_id="HDV2197494.1"
                     /translation="MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQP
                     WHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKV
                     PRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL
                     GTPQLKASTSINVPDPTPFVTYF"
     gene            4007..5863
                     /gene="sppA"
                     /locus_tag="RHX79_002337"
     CDS             4007..5863
                     /gene="sppA"
                     /locus_tag="RHX79_002337"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707347.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDV2197495.1"
                     /translation="MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQ
                     VSGSDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVN
                     TIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQY
                     YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD
                     DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYA
                     LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFAN
                     GAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAA
                     RAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGV
                     HTDGVSTSPLADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPEQIDKIAQ
                     GHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSG
                     SVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANVR"
     gene            6030..7046
                     /gene="ansA"
                     /locus_tag="RHX79_002338"
     CDS             6030..7046
                     /gene="ansA"
                     /locus_tag="RHX79_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HDV2197496.1"
                     /translation="MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRP
                     EMPDFTIHEYTPLMDSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALS
                     FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR
                     TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIAHPITPQPIGVVTIY
                     PGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSG
                     KVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGEL
                     TPDD"
     gene            7057..7698
                     /gene="pncA"
                     /locus_tag="RHX79_002339"
     CDS             7057..7698
                     /gene="pncA"
                     /locus_tag="RHX79_002339"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310502.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HDV2197497.1"
                     /translation="MPHRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRG
                     EAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLNQ
                     KAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFT
                     VLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG"
     gene            complement(7791..9149)
                     /locus_tag="RHX79_002340"
     CDS             complement(7791..9149)
                     /locus_tag="RHX79_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2197498.1"
                     /translation="MEQYDQIGARLDRLPLARFHYRIFGIISFSLLLTGFLSYSGNVV
                     LAKLVSNGWSNNFLNAAFTSALMFGYFIGSLTGGFIGDYFGRRRAFRINLLIVGIAAT
                     GAAFVPDMYWLIFFRFLMGTGMGALIMVGYASFTEFIPATVRGKWSARLSFVGNWSPM
                     LSAAIGVVVIAFFSWRIMFLLGGIGILLAWFLSGKYFIESPRWLAGKGQIAGAESQLR
                     EVEQQIEREKSIRLPPLTSYQSNSKVKVIKGTFWLLFKGEMLRRTLVAITVLIAMNIS
                     LYTITVWIPTIFVNSGIDVDKSILMTAVIMIGAPVGIFIAALIIDHFPRRLFGSTLLI
                     IIAVLGYIYSIQTTEWAILIYGLVMIFFLYMYVCFASAVYIPELWPTHLRLRGSGFVN
                     AVGRIVAVFTPYGVAALLTHYGSITVFMVLGVMLLLCALVLSIFGIETRKVSLEEISE
                     VN"
     gene            complement(9266..10024)
                     /locus_tag="RHX79_002341"
     CDS             complement(9266..10024)
                     /locus_tag="RHX79_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDV2197499.1"
                     /translation="MAAKDRIQAIKQMVANDKKVTVSNLSGIFQVTEETIRRDLEKLE
                     DEGFLTRTYGGAVLNTAMLTENIHFYKRASSFYEEKQLIARKALPFIDNKTTMAADSS
                     STVMELLKLLQDRSGLTLLTNSAEAIHVLAQSEIKVVSTGGELNKNTLSLQGRITKEI
                     IRRYHVDIMVMSCKGLDINSGALDSNEAEAEIKKTMIRQATEVALLVDHSKFDRKAFV
                     QLADFSHINYIITDKSPGAEWIAFCKDNNIQLVW"
     gene            complement(10161..11141)
                     /gene="ydjG"
                     /locus_tag="RHX79_002342"
     CDS             complement(10161..11141)
                     /gene="ydjG"
                     /locus_tag="RHX79_002342"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent methylglyoxal reductase"
                     /protein_id="HDV2197500.1"
                     /translation="MKKIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILE
                     AHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGD
                     RQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSE
                     GKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYS
                     PLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLAL
                     AWILKQSDLISILSGATAPEQVRENVAALNINLSDADATLMREMAEALER"
     gene            complement(11151..12098)
                     /locus_tag="RHX79_002343"
     CDS             complement(11151..12098)
                     /locus_tag="RHX79_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HDV2197501.1"
                     /translation="MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDA
                     INEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLV
                     TEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA
                     KARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLA
                     CGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNL
                     RECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG"
     gene            complement(12103..12939)
                     /locus_tag="RHX79_002344"
     CDS             complement(12103..12939)
                     /locus_tag="RHX79_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketose-bisphosphate aldolase"
                     /protein_id="HDV2197502.1"
                     /translation="MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPV
                     IISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMR
                     DASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAE
                     FVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKT
                     AISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGK
                     AE"
     gene            complement(12960..14003)
                     /locus_tag="RHX79_002345"
     CDS             complement(12960..14003)
                     /locus_tag="RHX79_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDV2197503.1"
                     /translation="MKNSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVH
                     GFESGPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCL
                     EGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHA
                     AMLADVKPGKKIIILGAGCIGLMTLQACKCLGATEIAVVDVLEKRLIMAEQLGATVVI
                     NGTKEDTIARCQQFTEDMGADIVFETAGSAVTVKQAPYLVMRGGKIMIVGTVPGDSAI
                     NFLKINREVTIQTVFRYANRYPVTIEAISSGRFDVKSMVTHIYDYRDVQQAFEESVNN
                     KRDIIKGVIKISD"
     gene            complement(14020..15399)
                     /locus_tag="RHX79_002346"
     CDS             complement(14020..15399)
                     /locus_tag="RHX79_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2197504.1"
                     /translation="MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGL
                     ILAQLKALGWTDNSTTATFSAITTAGMFLGALVGGIIGDKTGRRNAFILYEAIHIASM
                     VVGAFSPNMDFLIACRFVMGVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSY
                     PLCSLIAMGLTPLISAEWNWRVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEA
                     EKVMRSIEEGVIRQTGKPLPPVVIADDGKAPQAVPYSALLTGVLLKRVILGSCVLIAM
                     NVVQYTLINWLPTIFMTQGINLKDSIVLNTMSMFGAPFGIFIAMLVMDKIPRKTMGVG
                     LLILIAVLGYIYSLQTSMLLITLIGFFLITFVYMYVCYASAVYVPEIWPTEAKLRGSG
                     LANAVGRISGIAAPYAVAVLLSSYGVTGVFILLGAVSIVVAIAIATIGIETKGVSVES
                     LSIDAVANK"
     gene            complement(15426..16502)
                     /locus_tag="RHX79_002347"
     CDS             complement(15426..16502)
                     /locus_tag="RHX79_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HDV2197505.1"
                     /translation="MKALARFGKAFGGYKMIDVPQPICGPEDVVIEIKAAAICGADMK
                     HYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGD
                     FLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPIC
                     NAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVA
                     KELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRV
                     GMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQ
                     WREGFDAMVDKTAIKVIMTYDFDE"
     gene            complement(16872..17144)
                     /locus_tag="RHX79_002348"
     CDS             complement(16872..17144)
                     /locus_tag="RHX79_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707337.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaC family protein"
                     /protein_id="HDV2197506.1"
                     /translation="MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQL
                     VMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK"
     gene            complement(17186..17599)
                     /gene="msrB"
                     /locus_tag="RHX79_002349"
     CDS             complement(17186..17599)
                     /gene="msrB"
                     /locus_tag="RHX79_002349"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDV2197507.1"
                     /translation="MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVY
                     HCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHL
                     GHVFPDGPQPTGERYCVNSASLRFTDGENGEEING"
     gene            17941..18936
                     /gene="gapA"
                     /locus_tag="RHX79_002350"
     CDS             17941..18936
                     /gene="gapA"
                     /locus_tag="RHX79_002350"
                     /EC_number="1.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006322611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDV2197508.1"
                     /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYM
                     LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLT
                     DETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAK
                     VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTE
                     DDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK"
     gene            19020..19904
                     /locus_tag="RHX79_002351"
     CDS             19020..19904
                     /locus_tag="RHX79_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707334.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDV2197509.1"
                     /translation="MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQG
                     AHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLP
                     WTLKSHREDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLESHGEFETT
                     SALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCS
                     VINDEALNRIIAVGHQHHLNVVGWNPGPALSVSMGDMPDDGYKTFVCVETAYASETQK
                     VTKEKPAHLAQSIRVAKR"
     gene            complement(19955..20809)
                     /gene="yeaE"
                     /locus_tag="RHX79_002352"
     CDS             complement(19955..20809)
                     /gene="yeaE"
                     /locus_tag="RHX79_002352"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal reductase YeaE"
                     /protein_id="HDV2197510.1"
                     /translation="MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIEL
                     GLTLIDTAEMYADGGAEKVVGEALTGLRDNVFLVSKVYPWNAGGQKAINACEASLRRL
                     NTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDHADMQELWQLPGGNQ
                     CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHA
                     HNISAAQVLLAWVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELTMLDKAYPAPK
                     GKTALDMV"
     gene            complement(20899..21645)
                     /gene="mipA"
                     /locus_tag="RHX79_002353"
     CDS             complement(20899..21645)
                     /gene="mipA"
                     /locus_tag="RHX79_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="scaffolding protein MipA"
                     /protein_id="HDV2197511.1"
                     /translation="MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDT
                     DVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHL
                     DDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGI
                     GVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTAR
                     YTRLSDEVTDSPMVDKSWTGLISTGITYKF"
     gene            22081..24015
                     /gene="yeaG"
                     /locus_tag="RHX79_002354"
     CDS             22081..24015
                     /gene="yeaG"
                     /locus_tag="RHX79_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YeaG"
                     /protein_id="HDV2197512.1"
                     /translation="MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLM
                     AIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEK
                     KQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQI
                     LEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDEN
                     NQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLL
                     TATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLR
                     ISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGES
                     LKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVL
                     EQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVT
                     YADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARAN
                     NSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKG
                     YTRKQVRLLCEWYLRVRKSS"
     gene            24128..25411
                     /locus_tag="RHX79_002355"
     CDS             24128..25411
                     /locus_tag="RHX79_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaH/YhbH family protein"
                     /protein_id="HDV2197513.1"
                     /translation="MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAINKRSVT
                     DVDSGESVSIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQ
                     GQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKAHRAGYTANGV
                     PANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAE
                     LRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILL
                     YLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNP
                     AQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHL
                     QSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKD"
BASE COUNT         6555 a         6581 c         5949 g         6414 t
ORIGIN      
        1 ttctcgctcc caggatggtt ttgtaataaa acttttttca tcacattccc tgttattaca
       61 tactttagag gcgataattt tatccatgca aaaaaaatat ccaacgaatt ttcttgatcc
      121 gctggatatt tcagaatatg actcgaatag cacgaaagat tcgctcgctt acgctatcgc
      181 cccgcttccg gcttcatctg ctggcggact ttttttcgca ctacgtttac gcggtgcagc
      241 ctttttctta tcagcactgc caccactgcc cggagccaca atgccgcgaa actgccgcac
      301 cggagtacgt ttggcttgat caataagctg atatagcgtc cccaccagcg gctgcataaa
      361 gtcctgatag cgacactgct tttcgctgat ttgcgtcagc accgattccc agtgcgcggt
      421 catgtccggt cgcgtagcca tttctggcag cgaatggaat aacgcttttc cggcgtcggt
      481 ggagtggata tagcgccctt ttttggtgag gaaaccacgc ttgaacaaca gttcaataat
      541 cccggcacgc gttgcttctg tccccagacc atcggtcgca cgaaggatct ttttcagatc
      601 tttgtcctgc acaaagcgcg caatcccggt catcgccgaa agcagtgttg catcggtaaa
      661 atggcgcggc ggctgggttt gccgctctac cacttcacct ttttcacaca gcaactcatc
      721 gcctttcgcc accacaggca atggcgtgcc gtcgttttct tcatcgcgct ctttgctgcc
      781 taacagcgcg cgccaacctg cttcagcaag aaaacgcgct ttagcgacaa atttgccttt
      841 ggcaatgtcc agttcgataa cacacttgcg gaacaccgca tccgggcaga actgcatcag
      901 atactgacgg gcaatcaggt tatagacctt cgcttcgttc tccgtcaggt tgatcgcaga
      961 actccgtgcg gtcggaatga tggcgtggtg cgcatcgacc tttttgtcat cccaacagcg
     1021 gttgcgtata tctggatcta ccactggctg cggcaacaga tctggtgcat gaacgctgat
     1081 ggcattcatc accgcgtggc gtccggcaaa atgttcttct ggcaaatagc gacaatcgga
     1141 acgcggataa gtgattaact tgtgtgtttc gtacagcttc tggcagatat caagcacgtt
     1201 ctgcgcgctc agaccaaagc gttttgccgc ttcaatctgc aacgccgaaa gcgaaaacgg
     1261 cagcggcgcg gattctgatt cccgtttatc gttatagctg gtgacaatag ccggttgacc
     1321 actaatgcgg ttaaccacat gctccgccag tggacgatgt aacaagcgcc cttcttcatc
     1381 ctggtacggt tcacacgctt cgctcggttg ccagatagcg gtaaaccgct catcggcagg
     1441 tgtcacgata tgcgctttga cttcaaagaa gtctttcgcc acgaagtttt caatctcttc
     1501 atcgcggcgc accaccagcc cgagcacggg tgtctgcacg cgtcccacgg aaagtacgcc
     1561 ctgataaccg gcattgcgac cgagaatggt atacgcacgg gtcatattga tgccgtacag
     1621 ccagtcggca cgcgctcgcg ccagcgcaga aacgcacaat ggcacaaact cactgttgga
     1681 acgaagacgg tcgatcgccc gctcaaccgc ctgcgggttc aggtcgttta tcaagcaacg
     1741 ctgcacctgc tggcgctttt ccggtgccag ttgcagatag tccagcactt catccaccag
     1801 caattgccct tcacgatccg ggtccccggc gtgaacgatt tcgctggctt catgcaggaa
     1861 gcgtttgatg acgttaagtt gtttggtcac ggagggtcgg ggctgtaatt gccacttttc
     1921 cgggacaatc ggcaaatccg caagattcca gcgcgcatag cggctgtcgt aggcgtctgg
     1981 ctgcgcctgc tcaagcaggt gaccgataca ccaggtcacc acctgaccat taccgcactc
     2041 gataaagcca tcgcctttac ggtgcggttt gggcaggaca tcagcaatgg cgcgcgccag
     2101 actcggtttt tcggcaataa acaaccgcat tgaattaacg gatctcaacc atggcacgac
     2161 cgccgcgcgc tggcaccagt tcgccaatcg ccgtcagttc aatgccaaac tcggcggctg
     2221 tagttttaac ctcattttct gcttccggca tgaccgccag cagcaaaccg ccagaagttt
     2281 gcggatcgca cagcagatcg cgcacttcac gcggcatttc acccatcaga tgaccgtagc
     2341 tggcaaagtt acgttcggtg ccgccaggca ctgcgcccaa cttaatgtac tcttcaaccc
     2401 ccggcaattt tgggatcgcg tcatagtcaa cgcgcgcctg cacacctgcg ccctgacaca
     2461 tttcgctcaa atggcccagc agaccaaaac cagtaacgtc ggtcatcgct tttacgcctt
     2521 cgatgttggc aaaggacgca cctgcgatgt tcatccggca catcacttcc gtcgccagtc
     2581 cctgatgttc tggtttcaac agtgattttt tctcagccgt ggtaagaacg ccgatcccca
     2641 gcggtttcgt caggaacagt ttgcatccgg cttgtgcggt actgtttttc ttcacccgct
     2701 cggtcggtac gatccccgtt accgccagac caaaaatcgg ctccggcgca tcgatggagt
     2761 gaccgccagc cagcgcaata cccgcctgac ggcatgcata gcgtccacct tcggttactt
     2821 cgcgggcaat ttccggggaa agtttgttaa tcggccagcc gaggatcgca atcgccataa
     2881 tcggtttgcc ccccatcgcg aagatatcgc tgatggcgtt agtcgccgca atgcggccaa
     2941 aatcgaaagg attatcaacg atcggcataa agaagtcggt ggtactgata acgctggtgc
     3001 cattgcccag atcgtacacc gccgcatcgt cgcgggtctc attacccaca agcaaattcg
     3061 gatcaacaaa cttcgcctgc tcactgtgca ggatggtttc caacactttt ggggaaattt
     3121 tacagccgca accagctccg tggctgtatt gggtcaaacg aatcgagttc tcgctcatgg
     3181 acatctcctg tcaatgcaat ccgggtatgg taaccctcat tccgtgaagt gataagtgag
     3241 agtgtctgaa ttcctgcgcc tttgctcaca atccagacag tttcgcgaca attatcagaa
     3301 ataagttaca aacggcgtcg ggtccgggac gttaatcgac gtagatgctt tcaactgcgg
     3361 cgtgccgaga tagagaaaac cgacaatttt atcctgctca cggcaaccga atgcttcacg
     3421 cactaccgga ctttcagtta atgcgccact gcgccagatg ccgccaaatc cttgggcaac
     3481 ggctgccatt tgcatcgcca tgaccgcgca tccggcagac atttcctgtt cccatcgcgg
     3541 gactttatga ttttcttcgc atttcgccac caccgtgatg atgagcggtg cgcggaacgg
     3601 cgcattacgg gctttgtcga tagctttgtc atcactaccg gcagcaatcg ccccctgttc
     3661 cagtacggcg ctgaaacgct cgcgcccttc cccttcaatc acaaaaaaat gccacggttg
     3721 catggactta tggtccggcg cacgcatacc cgcacgcagg atgttttgca gttgttcacc
     3781 cgttggcgcg ggttcagcca ggcgggaggc gctacggcga ttgatcaata gttcgagtgc
     3841 atccatttga ttaactcctg tcgtgatatt tattcacaaa attaacacga gagtggattt
     3901 tgttacagca cagtccgcaa ttcctgctga caagtgccgg ttgggtcatt acgataacca
     3961 catctattgc gcctgtgaca ggtgtgacct taagttggga gaatacatgc gaaccctttg
     4021 gcgatttatt gccggatttt ttaaatggac gtggcgtctg ctgaatttcg tccgtgaaat
     4081 ggtacttaac ctgttcttta ttttcctcgt actggttggt gtggggatct ggatgcaggt
     4141 cagtggtagt gattcgaaag aaacggccag tcgtggcgca ctgctgctgg acatttctgg
     4201 tgtgatcgtc gataaacccg acagttctca gcggtttagt aaattaagcc gccagctgct
     4261 tggtgccagt tccgatcgtc tgcaggaaaa ctcactgttt gatatcgtca acaccattcg
     4321 ccaggcgaag gacgaccgca atatcaccgg tatcgtgatg gatctgaaaa acttcgcagg
     4381 cggcgaccag ccgtctatgc agtacatcgg caaagccctg aaagagtttc gtgacagcgg
     4441 gaaaccggtt tatgccgttg gcgagaacta cagccagggg caatattatc tcgccagttt
     4501 cgccaataaa atttggctgt caccgcaagg cgtggttgat ctgcacggtt ttgctaccaa
     4561 cggtctgtac tacaaatcgt tgctggataa gctgaaagtt tccacccatg tgttccgcgt
     4621 gggtacgtat aaatctgccg ttgaaccgtt tattcgtgat gatatgtcac cggcagcgcg
     4681 cgaagctgac agccgctgga ttggtgagct gtggcaaaac tatctgaata ctgttgccgc
     4741 taaccggcag atccctgctc agcaggtatt ccctggcgcg caagggttgc ttgagggttt
     4801 aaccaaaacc ggtggcgata ccgcgaaata tgcactggaa aacaagctgg tcgatgcact
     4861 ggcatcgagt gccgaaatcg aaaaagctct gaccaaagag ttcggctgga gtaagactga
     4921 taaaaattat cgcgccatca gttattacga ttacgcattg aaaacgccgg cagataccgg
     4981 tgacagcatc ggtgtcgtct tcgctaatgg cgcaattatg gatggcgagg aaactcaggg
     5041 gaatgttggc ggtgatacca ctgcggcaca aatccgcgac gctcgccttg acccgaaagt
     5101 gaaagcgatt gtcctgcgtg ttaatagccc aggcggcagc gttaccgcgt ctgaagtgat
     5161 tcgcgctgaa ctggcagcag cccgggcagc gggtaagcct gtggttgtat cgatgggcgg
     5221 catggcggca tctggtggtt actggatttc cacgccagct aattacattg tggctaaccc
     5281 cagcaccctg accggttcta tcggtatctt cggcgtgatc accaccgtag aaaatagtct
     5341 ggattcgatt ggtgttcata ctgatggtgt ctcaacttca ccgctggcgg atgtttctat
     5401 caccagggca ctgccgccgg aagcgcagca gatgatgcaa ttaagcattg agaatggcta
     5461 taaacgcttt atcacgctgg ttgctgatgc gcgtcattcg acgccggagc aaattgataa
     5521 aatcgcccag ggccacgtct ggaccggtca ggatgcaaaa gctaacgggc tggtcgatag
     5581 tctcggggat ttcgatgatg cggttgccaa agcagcagag ctggcaaaag tgaaacagtg
     5641 gcatctggaa tactacgttg atgaaccgac cttcttcgac aaagtgatgg acaacatgtc
     5701 tggttctgtc cgggcaatgt tgccagatgc gttccaggcc atgttacctg caccgcttgc
     5761 ctcggtagcc tctaccgtta aaagtgaaag cgacaagctg gccgcgttta acgacccaca
     5821 aaaccgttat gcgttttgcc tgacctgcgc caacgtgcgt taagtcttgt actgagtggc
     5881 cgacagatcg tcggccacat tattttttac ctcgacgaat cctcttcccg ctgtctcgcc
     5941 ccatatttcc ttatccgcat agtatcaggt gcgctcctcc tgcctcacgt atatactttt
     6001 gctctttcga tatcattcat atcaatatca tgcaaaagaa atcaatttac gtcgcctaca
     6061 cgggcgggac catcgggatg cagcgttccg agcagggtta tattccggtg tcaggtcatc
     6121 tacaacgcca actggcgctg atgccggaat tccatcgccc ggagatgcca gatttcacca
     6181 ttcatgaata tacgccgttg atggattctt ctgatatgac gccggaagac tggcagcata
     6241 ttgctgaaga tattaaagcg cactatgacg actatgatgg ttttgtcatt ctacacggta
     6301 ccgacacgat ggcgtatacc gcctctgcgc tgtcgttcat gctcgagaat ctcggtaaac
     6361 cggtcattgt gacagggtca caaatcccgc tggctgagtt acgctctgac ggacaaatta
     6421 atctgctgaa tgcgttgtac gttgcggcga attatccgat caacgaagta acgctctttt
     6481 tcaataaccg attgtatcgc ggcaaccgca ctaccaaagc ccatgccgat ggttttgatg
     6541 cgtttgcctc tccaaacctt cctccgttac tggaagctgg tatccatatt cgtcgtttga
     6601 atacgccacc cgccccgcac ggtgaagggg aattaatcgc tcatccaatc acgccacaac
     6661 caattggcgt agtgacgatt tatccaggga tttctgctga cgtcgtgcgc aattttctgc
     6721 gccaaccggt gaaagcattg attctgcgct cctatggcgt gggtaatgcg ccacaaaaca
     6781 aagccttcct gcaggaatta caagaagcca gcgatcgcgg tattgtggtg gtcaacctga
     6841 cacaatgtat gtccggtaaa gtgaatatgg gtggttatgc caccggtaac gccctcgccc
     6901 atgccggcgt tattggcggt gcagatatga ctgtagaagc cacgctaacc aaactgcatt
     6961 acctgctgag ccaggaactg gatactgaaa ccattcgcaa ggccatgagc caaaacctgc
     7021 gcggcgaact gacgccggat gattaaggag actgcaatgc cccatcgcgc cctgttactg
     7081 gtcgatttac aaaatgattt ctgtgctggt ggcgcgctcg ccgtgccgga aggtgacagt
     7141 acggtagatg tcgctaaccg ccttattgac tggtgccagt cgcgcggaga agcggttatc
     7201 gccagccagg actggcatcc ggcgaatcac ggcagttttg ccagtcagca cggtgtagag
     7261 ccttatacgc caggccaact cgacggtttg ccacaaacct tctggccaga tcactgtgtg
     7321 cagaacagtg aaggcgcaca attacatccg ttactgaacc aaaaagcgat cgcagcggtg
     7381 ttccataaag gcgaaaatcc tttagttgac agttacagtg ccttttttga taacggccgt
     7441 cggcagaaaa cctctctcga tgactggtta cgcgatcatg aaatcgatga attgatcgtt
     7501 atgggcctgg ctactgacta ttgcgtgaag tttaccgtgc tggacgcgtt acagttaggt
     7561 tataaggtga acgtgattac cgatggttgt cgtggcgtga atatccagcc ccaggacagt
     7621 gcgcacgcgt ttatggagat gtcagcagct ggggcaacgc tatatacgct ggcagactgg
     7681 gaagagacgc aggggtaatt ttacgctggc ctacaattct gtactggcat tgtaggccaa
     7741 ataaaacacg tcagtggcac atctggcaat tgatgccatc aacgaaagat ttaattcacc
     7801 tcagaaatct cttccaacga caccttccgc gtttcgatgc caaaaatgga gagaaccagc
     7861 gcacaaagca ataacatgac accaagtacc ataaacaccg tgatcgaccc ataatgtgtt
     7921 aataatgccg caacgccata gggcgtgaaa actgcgacga tccgtccgac ggcattaacg
     7981 aaacccgaac cgcgcaggcg taaatgcgtt ggccaaagct ccgggatata aaccgccgac
     8041 gcgaagcaaa catacatgta taaaaagaag atcatcacca ggccatagat taaaatcgcc
     8101 cactctgtag tctgaattga atagatatag cctaacacgg caataataat aagtaaggtg
     8161 gagccaaata accgacgagg aaaatgatca ataattaatg ccgcaataaa tattcctacc
     8221 ggagcgccaa tcataataac agcggtcatt aatattgatt tatcgacatc aatgccggag
     8281 ttaacaaata tggtcggtat ccatacggtg atggtataaa gcgagatgtt cattgcaatt
     8341 aaaacagtaa tcgcgactaa tgtacgtcgt aacatttcac ctttaaacag gagccagaaa
     8401 gtacccttga ttactttaac cttgctgttg ctctgatacg aagtaagcgg gggtaaacga
     8461 atactcttct ctctttcaat ttgctgctct acttcacgaa gttggctttc tgcaccggcg
     8521 atttgccctt tccctgccag ccatcgtggc gactcgataa agtatttacc tgagagaaac
     8581 caggctaaca gtatgccaat accacccagc agaaacatta ttcgccaact aaaaaaagcg
     8641 ataaccacta cgcctatcgc cgcagacagc atgggcgacc agttaccaac aaatgagagc
     8701 cgcgcggacc attttccacg caccgtcgcg gggataaact ccgtaaatga ggcatagcca
     8761 accataatca gcgcccccat tcctgttccc atcaggaagc gaaagaagat gagccagtac
     8821 atatcaggga caaaagcggc ccctgttgca gcaataccga cgatgagaag atttatgcga
     8881 aacgccctgc gccgcccaaa gtagtcacca ataaacccac cagtaagtga gccgatgaaa
     8941 taaccaaaca ttaatgccga ggtaaaggcg gcattgagga aattatttga ccatccattg
     9001 cttaccagct ttgctaagac gacattaccg gagtaactca aaaaccctgt taataacaga
     9061 ctaaagctta taataccaaa tatacgataa tgaaaccggg ccaaaggcaa gcggtccagt
     9121 cttgcgccaa tttgatcata ttgttccatt aggtgcctcg gatttgctaa aaaggtagca
     9181 attgcggcaa attcacttgc cgcatcttta tcatcatttt atttcaaggc gcaggaacaa
     9241 ataatattga caacgtgtgc ttaaattacc acaccagctg gatattattg tctttgcaaa
     9301 atgctatcca ctctgcaccc ggtgatttat cagttattat gtaattaata tgactaaaat
     9361 cagctaactg gacaaaagct ttgcgatcaa acttagagtg atcaaccaat aacgcaactt
     9421 ctgtcgcctg acggatcatt gtctttttga tttcagcttc cgcttcatta gagtccagcg
     9481 cgccgctgtt aatatcaaga cctttacaac tcattaccat gatatcgaca tgatagcgcc
     9541 tgatgatctc tttagtaatt cttccttgca gtgaaagtgt atttttgttt agttccccac
     9601 ccgttgaaac gactttaatt tctgactgag ccagaacatg aatcgcttcc gccgagttgg
     9661 ttagcaacgt caggccacta cggtcctgta acaatttgag caattccatt acggtactac
     9721 tggaatcggc tgccatggtg gttttattgt cgataaaggg tagtgccttg cgtgcaataa
     9781 gctgcttctc ttcataaaac gatgaagcgc gcttataaaa atggatattc tccgtcaaca
     9841 tcgctgtatt taaaacagca ccaccatagg ttctggtcaa aaagccttca tcttccagct
     9901 tctcaagatc gcggcgaatg gtttcttcgg ttacctgaaa aatcccactc aaatttgaga
     9961 ctgtcacctt tttatcgttg gcaaccattt gcttaattgc ctgaatcctg tcttttgccg
    10021 ccacgattac acccctgtat ctttttacat cacattagcg cgattatcgc ataaccgatg
    10081 tttactttca aaataacctg tttgaatcac agattttcat cacagttttc acagaaacag
    10141 aggtgaatcg tgttgagtat ttaacgctcc agggcctctg ccatttccct catcaatgtt
    10201 gcgtctgcat ccgataagtt gatattcagt gccgcgacat tttcgcgtac ctgttccggt
    10261 gcagtagccc cactaagaat ggagattaaa tcactctgtt ttaatatcca cgccagtgcc
    10321 agagtgggaa ttgtgcactg ataacgagca caaagtggct gccactgttc aagcatatca
    10381 atcactttca gcatgttttc acgctggaac cagactttat ttgcccgagc gccgcccgga
    10441 acgtaatcac gagtgatggt gccggtcaac aatccctgct ctagcgggga ataaacctga
    10501 accacaatgc cattatcacg acatagtggc agcagttcgt tttccattgc ccggtcgagg
    10561 atactgtatt tcgcctgaat aatatccagt tcaccatatt gcagatactc gcggatatgg
    10621 tcagcatcga cgttagcagc gcctatagcg cgaattttcc cttcagactt taactcatta
    10681 agcactgcga cagtttcagc gatcggcgta aaaaatggcg gcaccgactg ccagtgcgtc
    10741 atgtagatat cgatgtaatc aatacccaga cgttgcaagc tcgctgctac ctcttcgcgg
    10801 atagattccg gggaaaggtt tttatacaac tgccgatcgc caactttgtt gaataaactt
    10861 ccttttcgtt cccagacaat gccgcatttg gtttctacta caacctgttc acggggcagt
    10921 ttttttaacg cctgaccgac gataacttca ctattgccaa agttatatcc tggcgcagta
    10981 tcaatcagat taatgccaca acgatgggct tcaagaatag tatcaataca tatttgccga
    11041 tcgagatcgc cattccatgc aggaccgccg ccaatggccc atgtccccaa ccccattcgc
    11101 gaaagcgtaa tatccgttgt gcctaaaggt atctttttca tttgccttca ttatccttcg
    11161 tattcttcca gcaattgttc gaccagcttt ctgtttttta cgccggtggt ggcaccgacg
    11221 cttagaaccg agatagccgc cgttgcattg gcaaagcgtg cgcattcacg cagatttttg
    11281 ccttctaaca gtgccgcaat aaaacctgaa gcaaagttat cgcccgcgcc aatggtgtcg
    11341 atggcggtta ttcctgcgac cgccggcacc ttcatcgtca tgtcaccacg cttgataaag
    11401 cagccgtctt tacccgtttt aatcaccacc gtttttacgc cgcacgcaag aaagcagtca
    11461 gcaatttcat ccagtgtctc tttcccggtg agtaattttg cctcggcaaa attaggaaac
    11521 agataatcga cataactcaa tgcttcgcaa atatcatcca gcgtttcatt caaccgcggt
    11581 ttgatcatat cggcacagat aatcatctgc cgggctttag cttgcgtaaa aatttctgtt
    11641 agcgctttac catccaatag tggactgttg aaaatactgg ccagtgataa taatttcgcc
    11701 tgagaaaacc gcgcaaaatc aacatcgtca atattcaatt tccacagact gccattacgg
    11761 tttgtgacaa acgtccgctc gccatcctcc gtcaccagtc caacgttaat agaggtatct
    11821 atgctgacgt cctgcttcag gctttgaata tcaatattct ctttgcggca atggtcgaga
    11881 ataaattgcc ctgcggcatc tttaccaata cgactcatta atgctgtgcg atggcccaga
    11941 cgagaaataa ttgttgcttc atttattgca tcacccccgg tggtcattgc gattctttca
    12001 agaggataag aatccacatc aaagatattt ttactgaccg gttgcaatgg aatatcaaca
    12061 atagcggcac ctatacaaat aacgtcgaga ttatccatat cattattccg ctttgccatc
    12121 agaaccgaac agtttaattt tttccaatgc ccgttctttt acagctttac gtacttcacg
    12181 ttctaaatgc aggaaaggct gatcctggtt ttctttcact gcaaccattg cggcctgaca
    12241 gagctccgta tgaatgttga ttttcgcgat acccaacgaa attgcagttt taatgtcggc
    12301 atcactgatc cccgatgcac cgtgcaaaac cagcggaaca gaaacggcat cgcgtacgcg
    12361 tttgacgacc tcaaagttca attgtggctc tgacgtataa accccatgct ggttgccgat
    12421 ggcgacagcc aatgaatcac agcccgtacg ttcaacaaat tcagccgcct ggtcaggatc
    12481 ggtatagtga tagcccgcca gcgcttcctc ataaacggtt tcattaccga catgccctaa
    12541 ttccgcctct accggaatac ccagcggatg gaagaaatcg acagcctctt tggttaaacg
    12601 aatattttct tcgaaatcaa acgcggaagc atcacgcatt aatgaattca taccatgagt
    12661 ccaggcgtta tgaataatct ccatactccg accatgatcc caatgagtta ttaccggcac
    12721 cgttgctttt tgtgccattg ataccatcat gtgagagaaa tcttcaaatg aggtgttacc
    12781 gacaaaacct gtaccaaaag aaataataac cggggatttc gcttcttcgg ctgcgtcgat
    12841 aacgcccatc aacatttctg cattccatac gttaaaatgg gcaattgcat aatgtttatt
    12901 tgtggcatcg ttttcccaat atctgatatc tgcgagcatg ttctgttctc ccgtattaat
    12961 taatcgctaa ttttaataac gcctttaata atgtcgcgtt tgttgttaac tgactcttca
    13021 aatgcctgtt gtacatcccg ataatcgtaa atatgcgtca ccatcgattt cacatcgaat
    13081 cgccctgaag aaatagcttc aatcgtgacc ggataacgat tggcatagcg gaataccgtc
    13141 tggatagtga cttcgcgatt gattttgagg aaattgattg ccgaatcgcc gggtacagta
    13201 ccaacaatca taattttacc gccgcgcatt accagataag gtgcctgttt aacggtgacc
    13261 gcagaacccg ctgtttcgaa aacaatatct gcgcccatgt cttcggtaaa ttgctgacag
    13321 cgtgcaatag tgtcttcttt tgtgccgtta ataaccactg tcgcaccaag ttgttccgcc
    13381 attatcagac gtttttccag cacatcaacg acggcaattt ccgttgcgcc caggcatttg
    13441 cacgcttgca acgtcatcaa accaatacaa cctgctccca gaataattat cttcttaccc
    13501 ggtttaacat ctgccagcat cgcggcatgc atcccgactg cggcaggctc caccagcgcc
    13561 ccttccatcg tgtccatatt gtctggcagt ttgtaagtaa agctctccgg atgacacaga
    13621 tagtgcgtta atgcgccgcg gtagttgggt tgtgtcgcca taaaatcaac gtccgggcag
    13681 atgttatatt tgccttccag acagtaacga cagtgaccgc aaggaacgcc aggttcgata
    13741 tttacccgat cccccggttt aaatttgcgc acgcggcttc ccacagccac aaccgtcccg
    13801 gcgcattcat gacccaggcc aatttcttga tttgggtctt taggcggaat aaacgggcct
    13861 gattcaaaac catgtacatc tgaaccacaa ataccgacat attctacttt aatcaaaact
    13921 tcatcttctt taggcactgg tatttctgct gaaataattt tcattgtgcc cggcacctgc
    13981 aatattgctt ttgaattttt cattttgaat ccacccgtat tatttattgg ctactgcatc
    14041 aatacttaaa ctttcaacgg agacaccttt ggtttcaatt ccaatggtgg cgatagcaat
    14101 tgcgacaaca attgaaacag cccccagaag aataaagact cccgttacgc cataactact
    14161 gagcagcact gcaacggcat aaggtgcggc aataccactg attcgcccta ccgcattcgc
    14221 cagaccggag ccacggagtt tggcctctgt cggccagatt tcagggacat acactgccga
    14281 ggcatagcaa acgtacatat agacgaaagt aatcaggaag aaaccaatca acgttatgag
    14341 caacatactg gtttgcagtg aatagatata tccgagcacc gcaatcagga ttaatagccc
    14401 cacacccatt gttttacgcg gaattttatc catcaccagc atggcaataa aaataccaaa
    14461 tggcgcgcca aacatactca tggtatttaa aacaatcgag tcttttaaat taatcccctg
    14521 ggtcatgaat attgttggca accagttaat tagtgtgtac tgcacaacgt tcatggcaat
    14581 cagcacacaa gagcctaata tcacgcgttt cagtaatact cctgtcagta aggctgaata
    14641 cggcaccgct tgtggcgctt taccgtcatc agcaataacc acaggcggca aaggtttacc
    14701 cgtctggcgt atgacgcctt cttctatact ccgcatgact ttctcggctt cttgataccg
    14761 tccgcgcgat tccagccagc gcggggattc aggaaagtag cgccaggcca gcgccgtagc
    14821 gataagcgac aatattgcag ggataagcag ttgtacccgc cagttccact ctgcactaat
    14881 cagcggcgtg agtcccatcg caatcaatga acagagcgga tatgaccagt tgccaataaa
    14941 ggaaacccga ctggaccacg ttccgcgatt tctaccgggc atatattcgg tgaaaccagc
    15001 aaacagtgta accagtaaag ctcccagccc aacgcccatc acaaaacggc aggcaataag
    15061 aaaatccata ttcggtgaga aagcaccgac aaccatcgag gcaatatgaa tggcctcata
    15121 gaggatgaac gcatttctgc gaccggtttt gtcgccaatg atgccgccca ccagcgcacc
    15181 gagaaacatt ccggcggtcg tgattgctga gaatgtggct gtggtggaat tatctgtcca
    15241 gcccaacgct ttcagctgcg cgaggatcaa gccaccaacg gcattactcc agcagacaag
    15301 caagccaaac gcgacgatgg caaacattga cgaatgccag cggcaatccg gtaagcgatc
    15361 cagccgtgca ccacaatgcg gttttgttat ctgttccatg cgataacgtt ccttcaggag
    15421 agtagttatt catcaaagtc gtaagtcatg atcactttga ttgcggtttt atcgaccatc
    15481 gcatcaaacc cttcgcgcca ttgcgacagg ccgatacgat gcgtgatcat cggtttgact
    15541 ttgatagcgc cgctggctaa tagccggata gcgttacgcc atgaggtgga gtcataggcc
    15601 atatgcccaa tgatgctttt attccaggcg gtaatgtcat taatcgagaa atcaagaggt
    15661 ttgaagccca ttccaacgcg taccacttcc ccattcgggc ggagcatttc gatggcttgt
    15721 ttcagtgcga tattggcacc ggagcattca atcaccagtc ccagattatc tttgccacaa
    15781 atttgctggc agcgcgccac cacatcttcg gtagaaccat ttactactgc cgtcgccccc
    15841 agttcttttg caaccgggaa gcggaccgcc acatcttctt gcagaccaac gacgacgata
    15901 tttaccgccc ccataatccg cgccatttgt acggaaaaca gcccgagtgg gccagtgccg
    15961 atgacgacaa catcctgacc aggaaggaat ttcgattgct gcgcgatgga tttataggca
    16021 ttacagatag ggtcaagtac ggctgcgtcc tcataatcaa caccatcagg gatttcccac
    16081 aacgcatgac gatgaatttt gagaatttca ccaggaacca gacaatattt ggaaaaacca
    16141 ccgccccagg tattgttatc cagaccaagg tttacttttt ctgtacaaca cagaaaatca
    16201 ccctgttcac aggccggaca aacgccgcaa acgtgaccgc tgttatccga cacgacgcgt
    16261 tgccccactt tccagtcttt gactttttca ccaacctgcg caatacaacc tgcgaactca
    16321 tggccgcgga tagagttaaa ctcatcagaa ccgctatcga cattgtagtg cttcatgtct
    16381 gcgccgcaga ttgccgcggc tttaatttca atcactacgt cttccgggcc acaaatgggt
    16441 tgtgggacat caatcatctt gtagccgcca aaggccttgc caaaccgagc cagtgctttc
    16501 attgcgtcat cctctgtgtt ttgttttgct tagatggcca tcatacttac ccacatgatt
    16561 tttgaggtca atattaaatc tgtaaaacac agataatgat ctgcgtttta caacttagat
    16621 cacaattacg cagaaaatgg ctgggtctgt tacaggttgg tggaaggcgg gacgcaaaaa
    16681 gagcaaattc gagagggatt accggccaaa taggtctgag acttaagttc aggagaagtc
    16741 attcaggcgt gaacgcgact gcaagagatc ggactgggac ttagccaggt cgggtcgaga
    16801 taattgagac gagtcgtggg gtcattgttg gctatcccct tcatagccgc ggcaaaaagg
    16861 ggataaacca cttacttaaa catagcaata ggctttgctg agataccaaa atcttctttt
    16921 aactgctgtt tgctcttcat gaccatctga ccatttgtgt caattgtcat atgctgtgct
    16981 tcggtattat ggcgggcttg ccacagcatc accagttgca ggcaattctc tttttgttcc
    17041 tcggtcaacg caacgccatc aggccatttc cccagttcaa cggcggtcga caaacgctgg
    17101 tatacctcag gcgtcatgct gttgataatg tcatcaagat tcataatttt tccgctcctg
    17161 tggaataagt tgctgaatcg ttttttcaac cgttgatttc ttcgccgttt tcgccatcgg
    17221 taaagcgtaa agaggcagag ttaacacaat aacgttcgcc cgttggctgc ggcccgtcag
    17281 ggaagacatg ccccagatgg gcatcacagt taccgcaacg aatttctatg cgctgcattc
    17341 catgtgacaa gtctttgata taacgaatgg attcttcact caccggttcg tagaaactgg
    17401 gccaaccaca gccggaatca tacttggttt gggaatgaaa cagcggggca tcgcagatca
    17461 aacagtgata tacgccgtca cgcttgttat gcagtaaacg acccgtaaat ggcggctctg
    17521 tcccatgatt ctgcgtcacg taaaactgca tctcggacaa attttttttc agttcttctg
    17581 ccgaaggttt attagccatt tgctcacatc tcactttaat cgtgctcaca ttacgtgact
    17641 gattctaaca aaacattaac accaactggc aaaattttgt cctaaacttg atctcgacga
    17701 aatggctgca cctaaatcgt gatgaaaatc acatttttat cgtaattgcc ctttaaaatt
    17761 cggggcgccg accccatgtg gtctcaagcc caaaggaaga gtgaggcgag tcagtcgcgt
    17821 aatgcttagg cacaggattg atttgtcgca atgattgaca cgattccgct tgacgctgcg
    17881 taaggttttt gtaattttac aggcaacctt ttattcacta acaaatagct ggtggaatat
    17941 atgactatca aagtaggtat caacggtttt ggccgtatcg gtcgcattgt tttccgtgct
    18001 gctcagaaac gttctgacat cgagatcgtt gcaatcaacg acctgttaga cgctgattac
    18061 atggcataca tgctgaaata tgactccact cacggccgtt tcgacggtac cgttgaagtg
    18121 aaagacggtc atctgatcgt taacggtaaa aaaatccgtg ttaccgctga acgtgatccg
    18181 gctaacctga aatgggacga agttggtgtt gacgttgtcg ctgaagcaac tggtctgttc
    18241 ctgactgacg aaactgctcg taaacacatc accgctggtg cgaagaaagt ggttatgact
    18301 ggtccgtcta aagacaacac tccgatgttc gttaaaggcg ctaacttcga caaatatgct
    18361 ggccaggaca tcgtttccaa cgcttcctgc accaccaact gcctggctcc gctggctaaa
    18421 gttatcaacg ataacttcgg catcatcgaa ggtctgatga ccaccgttca cgctactacc
    18481 gctactcaga aaaccgttga tggcccgtct cacaaagact ggcgcggcgg ccgcggcgct
    18541 tcccagaaca tcatcccgtc ctctaccggt gctgctaaag ctgtaggtaa agtactgcca
    18601 gaactgaatg gcaaactgac tggtatggcg ttccgcgttc cgaccccgaa cgtatccgta
    18661 gttgacctga ccgttcgtct ggaaaaagct gcaacttacg agcagatcaa agctgccgtt
    18721 aaagctgctg ctgaaggcga aatgaaaggc gttctgggct acaccgaaga tgacgtagta
    18781 tctaccgatt tcaacggcga agtttgcact tccgtgttcg atgctaaagc tggtatcgct
    18841 ctgaacgaca acttcgtgaa actggtatcc tggtacgaca acgaaaccgg ttactccaac
    18901 aaagttctgg acctgatcgc tcacatctcc aaataagttg agatgacact gtgatctaaa
    18961 aagagcgact tcggtcgctc ttttttttac ctgataaaat gaagttaaag gactgcgtca
    19021 tgattaagaa aatttttgcc cttccggtca tcgaacaaat ctcccctgtc ctctcccgtc
    19081 gtaaactgga tgaactggac ctcattgtgg tcgatcatcc ccaggtaaaa gcctcttttg
    19141 cattacaggg cgcacacctt ctctcgtgga aacctgcggg tgaagaagaa gttctgtggt
    19201 tgagcaacaa cacaccgttc aaaaatggcg tcgctattcg cggtggcgta ccggtttgct
    19261 ggccgtggtt tggtccggcg gcacaacaag gtctgcctgc gcacggtttt gcccgcaacc
    19321 tgccgtggac gctgaaatca catcgtgaag atgctgatgg cgtagcgctg acttttgaat
    19381 tgacgcaaag cgaagagacg aaaaaattct ggccgcacga ctttacgctg ttagcgcatt
    19441 tccgcgtggg taaaacctgt gaaatcgatc ttgaatcaca tggcgaattt gaaaccacct
    19501 ctgccctgca tacctacttt aacgtgggtg atatcgctaa ggtaagcgtc agtgggctgg
    19561 gcgatcgctt cattgataaa gtaaatgacg cgaaagaaga tgtactgacc gacggtattc
    19621 agaccttccc tgaccgtacc gatcgcgtgt atctgaatcc gcaagattgc agcgtgatta
    19681 atgatgaagc gctgaatcgt attatcgccg taggccacca gcatcatctg aacgttgtcg
    19741 gctggaaccc gggaccggcg ctttcagtta gcatgggcga catgccggat gatggctaca
    19801 aaacatttgt ttgtgtagaa acggcttacg cttcagaaac gcaaaaagtg accaaagaga
    19861 aacctgcaca tctggcgcaa tccattcgcg ttgcgaaacg ttaatttgcg ttaatgttgt
    19921 gtgccgggtg cgatgcatcc ggcacgtatc aacatcacac catatccagc gcagtttttc
    19981 cttttggtgc cggatacgct ttatccagca tggttaattc cgctgacgaa agttcgacct
    20041 caagcacagc cgcattctgt tggacatggg caatcgtggc cgcttttgga atcgccatca
    20101 caccctgatg gctgattacc cacgccaaca atacttgtgc cgcgctgata ttgtgagcat
    20161 gtgcaatttc gttgactacc gcgtttttta acagtccatt gcgcaaccgc ccggcctggg
    20221 ctaatggact gtaagccatc accggcatct gctgttgctg gcaccagggg agtagatcgt
    20281 actcaatccc tcgtgaaccg agatggtaaa gcacctgatt agtggcacac tgatttcccc
    20341 ccggcagctg ccagagttcc tgcatatcag catgatcaag gttagaaacg ccccagcggc
    20401 ggatttttcc ctgggcgatc aatttttcca tcgctgccac agtctcttca aaagcgaaac
    20461 tgccagacca gtgtaataag tagagatcga gataatcagt attgagacgg cgtaaactgg
    20521 cttcgcatgc atttatcgct ttttgcccgc cagcattcca cggatagact ttagagacga
    20581 gaaagacgtt atcgcgcaga ccggttaatg cttccccaac caccttttcg gcaccgccat
    20641 cggcatacat ttcggcggta tcaatgaggg ttaaaccgag ctcaatgccc gcgcgtagtg
    20701 cagcaacttc tgttttgcgc tgactggcat cttcgcccat ataccatgtt ccctgcccta
    20761 tggctggcag tgagacatcg ccactaaatt gaatcatttt ttgttgcatt gtttcctccc
    20821 aggtattgca ccaccgtaat gcaaaacagg gcgtgacgcc ctgtttttat gcacaaaatg
    20881 ccctggaaag atgcattatc agaatttgta ggtgatcccg gtagaaatca ggccagtcca
    20941 ggatttatcc accatcgggc tgtcagtaac ttcatcagac agacgggtat agcgcgcggt
    21001 accgtaaaca ctccagtcgc cgaggaagtt gtagctggcg ctcagctcca ggtaagggct
    21061 ccagctgtcg ttcgggttat agccacgcag accgctgcga gcggactctt tgcgcgatac
    21121 gccataatag tattcgttct ggttttcgct gttccactgc acaccaatac ccggagtcac
    21181 ggtcaggcca ccgttggtgt aacgatacaa ccaggccata tcccagacaa tgccgttgct
    21241 gttatccagg gtatcgccag ccagggtggt acgcaggtaa ccgtactggg taaagtgagc
    21301 ataagacaga ccagccatca tggtgctctt acggtcatcc aggtgacgca tttggtgatc
    21361 gccactgtct ttcgctttga agtaaagcgg cgaccagtaa gcggtaattg aaagtttatc
    21421 cgttgcgtca ttccacaggt agtaaccacc acctaagcca cggaaccaga agttatcgcc
    21481 ttcatagttg attaccggta ctgggtaaac atcggtatcg taatctttat atgggtgctc
    21541 aacgacacct acgcctgcgc ccagggaaaa tttaccttca gcgtgcgcta cgcctgcaga
    21601 cgttgcgata agcactccaa gtgccagaag tttgagtttg gtcacaatta atcattcctt
    21661 aaacaaatgt ttagcgggcg acaaagttta cccgtcaata catcgaaacc caaccttttt
    21721 acgttttcat tttttaaagt aactgtttaa ttttcctgac gcggatgaca ccgcgcttac
    21781 agccaaatga atttagcgtt actggctacc ctggtcttta cattaattat gcaaaattta
    21841 tggatgagtt gttgatatgc cattgaaatt aagaaagccg tgcaggcaag ttttccattt
    21901 gccatctacg cttaattttg aaggtgtatc accgggcacg ttgttctcat cgtcgataaa
    21961 atggcatgag agttgctgtg ttttagcaag agacgtcgtt cagtttacct cttccgggag
    22021 cctctactat tcatatgaac ggctcttaac ctgtgctaaa aaacgaaagg acggcatacc
    22081 atgaatatat tcgatcacta tcgccagcga tatgaagctg ccaaggacga agagttcaca
    22141 ctgcaggagt ttcttaccac ttgtcggcaa gatcgcagtg cttatgccaa cgcggctgag
    22201 cggctattga tggctatcgg tgagcctgtc atggtcgata cagcccagga acccagactt
    22261 tctcgactct tttctaaccg ggtcattgca cgttatccgg catttgaaga gttttacggc
    22321 atggaagacg cgattgaaca gattgtctct tatctgaaac acgcggctca ggggctggaa
    22381 gagaagaaac aaatcctgta tctgctgggg cctgtgggtg ggggtaaatc atcgcttgct
    22441 gagcgactga aatcattaat gcagctcgta ccgatttatg tattgagcgc caacggtgag
    22501 cgtagcccgg tcaacgatca tccgttctgt cttttcaatc cgcaggaaga tgctcagatt
    22561 ctggaaaaag agtatggcat tcctcgccgt tatctcggca ccatcatgtc gccatgggcg
    22621 gcaaaacgcc tgcatgaatt tggtggcgat atcactaagt tccgggtagt gaaggtctgg
    22681 ccgtcaattc tgcaacaaat tgctatcgcc aaaacggaac ccggtgatga gaacaaccag
    22741 gacatctccg cgctggttgg gaaagtcgat attcgtaaac tcgaacacta cgcgcagaat
    22801 gacccggacg cctacggcta ttccggtgcg ctgtgccgcg ccaaccaagg gatcatggaa
    22861 tttgtcgaga tgtttaaagc accgataaaa gtgctgcatc cgctgttaac cgccactcag
    22921 gaaggtaact acaacgggac ggaaggtatc tccgccctgc cgttcaacgg gattattctc
    22981 gcccactcga acgaatccga atgggtcact ttccgtaata acaaaaacaa cgaagccttc
    23041 ctcgaccgtg tttacatcgt gaaggtgccg tattgcttac gcatttccga agagatcaaa
    23101 atctacgaga aattgcttaa tcacagtgaa ttgactcacg ccccctgcgc ccctggcacg
    23161 ctggaaacgc tgtcacgttt ttccattctt tcgcgcctta aagagccaga aaactccagc
    23221 atttattcaa agatgcgggt ttatgatggc gaaagtctga aagacaccga tcccaaagcc
    23281 aagtcgtatc aggaatatcg tgactacgcc ggtgtcgatg aagggatgaa cggtctgtcg
    23341 acgcgttttg cgtttaagat cctctcccgc gtgttcaact tcgatcatgt agaagtggcg
    23401 gcaaacccgg tccatctgtt ctacgtactg gaacagcaga tcgagcgcga gcagttccca
    23461 caagagcagg cagaacgcta tctggagttc ctgaaaggtt atctgatccc gaaatatgcc
    23521 gagtttatcg gcaaagagat ccagacggcc taccttgaat cctattccga atatgggcaa
    23581 aacattttcg accgttatgt tacctacgcg gatttctgga ttcaggatca ggagtatcgc
    23641 gatccggata ccgggcagct gtttgaccgc gagtctctta acgccgagct ggagaaaatc
    23701 gagaaaccgg cggggatcag taatccaaaa gatttccgca acgagattgt taacttcgta
    23761 ctgcgcgcca gagcgaataa cagcggacgc aatccgaact ggaccagcta tgaaaaactg
    23821 cgcacggtta tcgagaagaa aatgttctcc aataccgagg agctgttgcc ggttatctcg
    23881 tttaacgcca aaacgtcaac cgacgagcag aagaaacacg acgactttgt cgaccgtatg
    23941 atggaaaaag gctacacccg taaacaggtg cgtttactgt gcgaatggta tttgcgcgta
    24001 cgtaaatcgt cttaacaacc ctggcccggt acacatgtta ccgggcctac aacgacagcg
    24061 aaccgtgggc ctgagaagcg gcaacacagg cgtagcatac agttggcaaa tgtagtacgg
    24121 ggggcatatg acctggttta ttgaccggcg tctgaacggc aaaaacaaaa gcatggtgaa
    24181 tcgccagcgt tttttacgcc gttataaagc gcaaattaaa cagtcgatct ccgaggccat
    24241 taataagcgt tcggtgactg acgtcgacag cggcgaatcc gtatccattc ccacggaaga
    24301 tattagcgaa ccgatgtttc atcaggggcg tggcggtctg cgccaccgcg tgcatccggg
    24361 caatgaccat ttcgtccaga acgaccgaat tgaacgtccc cagggtggcg gcggaggttc
    24421 cggcagtggt cagggccagg ccagccagga tggtgaaggt caggatgaat ttgtctttca
    24481 gatttcgaaa gatgagtatc ttgatttgct ctttgaagat ttggccttac cgaatctgaa
    24541 acaaaaccaa caacgccagc tgaccgaata taaagcgcat cgggcgggtt ataccgctaa
    24601 cggcgttccg gcaaatatca gcgttgtgcg ctccttgcag aactcactgg cgcgacgcac
    24661 agccatgacg gcaggcaagc ggcgggaact tcatgcactg gaagagaatt tggccatcat
    24721 cagcaacagt gaacctgcgc agctgctgga agaggaacgt ctgcgcaaag aaattgcaga
    24781 attacgtgcc aaaattgaac gcgtcccttt tattgacacc ttcgatttac gttacaagaa
    24841 ctacgagaag cggcccgatc cctccagcca ggcagtgatg ttttgcctga tggacgtttc
    24901 cggttcaatg gatcaatcca ctaaagatat ggctaagcgt ttttatattc tgctgtatct
    24961 gttcctcagc agaacgtata agaacgtgga agtcgtatac atccgccatc atacccaggc
    25021 gaaagaagtc gatgaacatg agtttttcta ctcgcaggaa acaggcggca ccatcgtttc
    25081 cagcgccctg aaactgatgg atgaggtagt gaaagagcgt tataacccgg cacagtggaa
    25141 tatttacgct gcacaagcat cggacggcga taactgggcc gatgactctc cgctttgcca
    25201 tgaaatcctg gcgaaaaaat tattacctgt tgttcgttat tacagctata tcgaaattac
    25261 ccgtcgtgca catcagacat tgtggcgaga atatgagcat ctgcaatcta ctttcgacaa
    25321 ctttgcgatg cagcacatcc gcgaccagga tgatatttat ccggtgttcc gtgaactgtt
    25381 tcataaacaa aatgcaacag ctaaagacta aaactatcag ccaggtcatt atcgcctggc
    25441 tgatttttag cttactgtaa attatctcat ttattacata cattagctta caatcgctt
//
LOCUS       DAPGWB010000060        25363 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.060, whole genome shotgun sequence.
ACCESSION   DAPGWB010000060 DAPGWB010000000
VERSION     DAPGWB010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 25363)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25363)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25363
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.060"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            118..1704
                     /gene="prpR"
                     /locus_tag="RHX79_002356"
     CDS             118..1704
                     /gene="prpR"
                     /locus_tag="RHX79_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate catabolism operon regulatory protein
                     PrpR"
                     /protein_id="HDV2197514.1"
                     /translation="MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQL
                     GFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGK
                     LTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAG
                     LITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDM
                     LGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSH
                     PFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLP
                     LQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMRQGQFRRDLFYRLSILR
                     LQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLVHYDWPGNIRE
                     LRNMMERLALFLSVEPTPDLTPQFLQLLLPELARESAKTPAPRLLTPQQALEKFNGDK
                     TAAANYLGISRTTFWRRLKS"
     gene            complement(1805..2080)
                     /locus_tag="RHX79_002357"
     CDS             complement(1805..2080)
                     /locus_tag="RHX79_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HDV2197515.1"
                     /translation="MKIISKMLVGALAFAVTNVYAAELMTKAEFEKVESQYEKIGDIS
                     TSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK"
     gene            2227..2898
                     /locus_tag="RHX79_002358"
     CDS             2227..2898
                     /locus_tag="RHX79_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HDV2197516.1"
                     /translation="MMKLLHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQT
                     SLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAW
                     CSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTW
                     ARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYE
                     GVTQR"
     gene            complement(2915..3160)
                     /locus_tag="RHX79_002359"
     CDS             complement(2915..3160)
                     /locus_tag="RHX79_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414861.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197517.1"
                     /translation="MAVQLFKTLLNQIPLLSSLQSGTLPLFGYSGRVRPMKKAHTGES
                     GLKWEAKDSSKLIGNKDHALRGLSSPMAGIRQIRLIT"
     gene            complement(3573..4388)
                     /locus_tag="RHX79_002360"
     CDS             complement(3573..4388)
                     /locus_tag="RHX79_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197518.1"
                     /translation="MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFK
                     VLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWLDDNALTINVQFNDFPGFYDWMD
                     YPDHQVKFVFRILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDC
                     KCILLEHHMPLLRIFPKGKECMRVEKWLREMSSIPETDAPIKQALAHGLLLHLKNNHP
                     VSPESLVMLLLSVLDVKTYRDDARLNEWISNRVQELGDRYYPVNKHVKIRYTL"
     gene            complement(4631..5680)
                     /gene="yahK"
                     /locus_tag="RHX79_002361"
     CDS             complement(4631..5680)
                     /gene="yahK"
                     /locus_tag="RHX79_002361"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent aldehyde reductase YahK"
                     /protein_id="HDV2197519.1"
                     /translation="MKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDL
                     HQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKHAPGDLVGVGCIVDSCKHCEECEDG
                     LENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAG
                     ITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALG
                     ADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKS
                     PEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRG
                     DVKYRFVIDNRTLTD"
     gene            complement(5767..6723)
                     /locus_tag="RHX79_002362"
     CDS             complement(5767..6723)
                     /locus_tag="RHX79_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2197520.1"
                     /translation="MKKSWRNNVEFYLIGLLVLTVAAFSITMPEIFWSISNFQSVASQ
                     MPVLGILALAMAVTMLCGGINLSIIATANACSLVMAWVATQYPPGIATVVATLLAGAG
                     AAVIIGLCNGVLIAGIRVSPILATLGMMTLLKGINILVTGGSAIANYPSWVLWLNHAQ
                     WFGIPLPMWLFAAVALGLWILLEKTPLGKAIYLIGSNERATLYSGINTRRVLIWVYVI
                     SALLCAVAAFLMMSKLNSAKASYGESYLLVSILAAVLGGVNPDGGSGRIIGMVLALFL
                     LQIIESGFNILGISPYLTMALWGTLLLCFIQVRGMLGLDRVV"
     gene            complement(6720..7691)
                     /locus_tag="RHX79_002363"
     CDS             complement(6720..7691)
                     /locus_tag="RHX79_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2197521.1"
                     /translation="MAELKKRHEFWLALLIVVLFVGLAWRSDEFLTFGNLYDLANNYA
                     MLTILACGLFVVLISGGIDISFPAMTIIAQYGMVLLLQKIGGNFAVAFALAGCIGILL
                     GLINALLVNRLRVPSIIITISTLNIFYGLLLWLSKGVWLYDFPPWFEQGVMLFKYTDA
                     DGYDYGLGLPLIAMITVVLLTAFIMNFTSVGRKIYALGGNRESASRIGFSVLKLQLFV
                     YGYMGLMSGAAGVVQSWTVMTVAPDSLLGYELTVLAAVVLGGTSLLGGRGTLTGTLLG
                     VVLLAVMQNGLNLLGVSSYWQTLITGIIIVASISATAWSQHQNRSLL"
     gene            complement(7684..9168)
                     /locus_tag="RHX79_002364"
     CDS             complement(7684..9168)
                     /locus_tag="RHX79_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDV2197522.1"
                     /translation="METFLSLRHINKTFHATRALRDVSLDFMSGEVHCLAGQNGCGKS
                     TLIKIMSGVYRPDEGAEITLGGKNWSKLTPAASVAQGIQVIYQDLSLFPNLSVWENIA
                     VNHYHHGLFVNRRRLREVAQAAMTSINVTLPLDTLVSELSIARCQLVAICRALAQDAR
                     LIVMDEPTASLTHQEVQGLLQVVHQLRERGICVVFVSHRLEEVMEVSDRISVLKDGEL
                     VGTFPAAEMTTKQLGFLMTGQEFEYQVRELWQGKSSTPVLEVRNLSRHGEYLNINLRV
                     EAGEVVSIVGLLGAGRTELCLSLFGMTRPDAGEILINGQPVTLHSNQDAIRHGIGYVS
                     EDRMSRGLVMAQSIEDNIISTVFHKVKDRFGFLSETKVRDLVDRLIKALTIKVSDPHL
                     PVNTLSGGNAQRVSIAKWLAIGPRLLILDSPTVGVDIANKAGIYGIISDLAAHGIAVL
                     MICDEIEEAWYQSHRILVMQKGQITHSFLPDSSSQARIAEVVNG"
     gene            complement(9217..10200)
                     /locus_tag="RHX79_002365"
     CDS             complement(9217..10200)
                     /locus_tag="RHX79_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV2197523.1"
                     /translation="MNKRFVINMVSSLLLGAALISAPLQAAEKVVVNISKVDGMPWFN
                     RMGEGVVEAGKAFGVNASQVGPSSTDAPQQVKIIEDLIARKVNAITIVPNDANVLEPV
                     FKKARDAGIVVLTNESPGQPSANWDIEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGS
                     LTVPQHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVV
                     SFGSNGPIGAGRAVKEKRAKNKVAVYGMMIPSQAASLIKSGDITEGITYDPASAGYAL
                     AAVASTLLKGEEIKPGLEMQNLGKADVDMDKRIIRFHKVLLVNKDNIDSLY"
     gene            complement(10454..10864)
                     /locus_tag="RHX79_002366"
     CDS             complement(10454..10864)
                     /locus_tag="RHX79_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HDV2197524.1"
                     /translation="MTIKEKFSQKYPHASFCTFGDSAALADHLATLIATGVKTASCGS
                     LAGCIEDNAFPMIGEYKIVENSRDEPVCVIRVIGLHLLRFSDVTVELARKEGEGDLSL
                     EYWRNEHRRFFQAEGSYSPEMDVIFEEYALIDVV"
     gene            complement(11163..12545)
                     /locus_tag="RHX79_002367"
     CDS             complement(11163..12545)
                     /locus_tag="RHX79_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDV2197525.1"
                     /translation="MKESNSRREFLSQSGKMVTAAALFGTSVPLAHAAVAGTLNCEAN
                     NTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDAT
                     LPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQP
                     YTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFP
                     QHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHL
                     HETTPSGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDALANRMAAQQISI
                     ASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNE
                     QNLSRSLFLATGDILPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHK
                     GQLVWGSVAG"
     gene            complement(12555..13505)
                     /locus_tag="RHX79_002368"
     CDS             complement(12555..13505)
                     /locus_tag="RHX79_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase family protein"
                     /protein_id="HDV2197526.1"
                     /translation="MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASD
                     YDIVLTHGNGPQVGLDLRRAEIAHEREGLPLTPLANCVADTQGGIGYLIQQALNNRLA
                     RHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDKLQKANPDWCFVEDAGRG
                     YRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTEAGDYQSVDAVIDKDL
                     STALLAREIHADILVITTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSML
                     PKIIASLTFLEQGGKEVIITTPECLPAALRGETGTHIIKT"
     gene            complement(13648..15066)
                     /locus_tag="RHX79_002369"
     CDS             complement(13648..15066)
                     /locus_tag="RHX79_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1116 domain-containing protein"
                     /protein_id="HDV2197527.1"
                     /translation="MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNM
                     QVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTPKTILHAG
                     PPITWEKMCGAMKGAVTGALVFEGLAKDLDEATELAASGEITFSPCHEHDCVGSMAGV
                     TSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPMLRDA
                     MKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEF
                     VASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPA
                     QQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSR
                     QMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAG
                     IVHPPFACFEKAILGWCERYGV"
     gene            complement(15066..16613)
                     /gene="fdrA"
                     /locus_tag="RHX79_002370"
     CDS             complement(15066..16613)
                     /gene="fdrA"
                     /locus_tag="RHX79_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
                     /protein_id="HDV2197528.1"
                     /translation="MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNK
                     GVLKNLGLLTPELEQAKNGDLMIVINGKAGADNEQLLVEIEELFNSKAQSGSHEARYA
                     TIASAKKHIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAH
                     EKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQ
                     LIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAVARKVLERARACRK
                     PVVVCFLGRVETPVDEQGLQFARGSKEAALKAVMLSGVKQENLDLHTLNQPLIADVRA
                     RLQPQQKYIRGLFCGGTLCDETMFAVMEKHGDVYSNIQPDPEFRLQDINRSIKHTFLD
                     FGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIEAI
                     KEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREF
                     ICKGEEA"
     gene            complement(16603..17466)
                     /locus_tag="RHX79_002371"
     CDS             complement(16603..17466)
                     /locus_tag="RHX79_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2877 domain-containing protein"
                     /protein_id="HDV2197529.1"
                     /translation="MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEE
                     YDNAPNSCRLALTHFDDLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAV
                     NFHLIAWLQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNEKQNI
                     AAAVASMIGLGIGLTPSADDYLTGLALILFIPGHPSEKYKEEFYLGMQRGRNNTTLLS
                     AITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCA
                     LSQTYGGNYVS"
     gene            complement(17506..18111)
                     /locus_tag="RHX79_002372"
     CDS             complement(17506..18111)
                     /locus_tag="RHX79_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDV2197530.1"
                     /translation="MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAIT
                     LASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVT
                     RFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIV
                     QLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA"
     gene            18369..18866
                     /locus_tag="RHX79_002373"
     CDS             18369..18866
                     /locus_tag="RHX79_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HDV2197531.1"
                     /translation="MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCS
                     FYAAGGGKSGFIRSLAVNYSGMVWAFFAALAAGWLASVSGLSAFWASVITTVPFSAVV
                     VWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATT
                     KRDGY"
     gene            18958..19890
                     /locus_tag="RHX79_002374"
     CDS             18958..19890
                     /locus_tag="RHX79_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2197532.1"
                     /translation="MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRME
                     TGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFHAIKRSIDTISQGIEARVRICIN
                     QLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGG
                     GIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLH
                     GQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT
                     QHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN"
     gene            complement(19932..21020)
                     /locus_tag="RHX79_002375"
     CDS             complement(19932..21020)
                     /locus_tag="RHX79_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDV2197533.1"
                     /translation="MASHDLSVFLEEFGATVNLTLPGIVSEKERLLLKLLMEGMSVTE
                     ISQYRNRSAKTISHQKKQLYEKLGIQSDITFWRDIFFQYHPQVISGTGNKNNFYIPDN
                     RCHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFI
                     PLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNL
                     VKKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQA
                     FPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKG
                     VHFLQGYLYSPPVPGNKFISEWVMKAGG"
     gene            complement(21162..25145)
                     /gene="ehaA"
                     /locus_tag="RHX79_002376"
     CDS             complement(21162..25145)
                     /gene="ehaA"
                     /locus_tag="RHX79_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin EhaA"
                     /protein_id="HDV2197534.1"
                     /translation="MNKIYRLKWNRSRNCWSVCSELGSRVKGKKSRAVLISAISLYSS
                     LVFADDVIVNQDKTIDFGKENQSIDYRITVTDNANLVINATDTSRPRLTLASGGGLDI
                     TGGKVTINGPLNFLLKGTGFLNVSNAGSELYADDLYESNSGMRHDRGYFNVSNGGKIH
                     VKGTSRLTYLQGNVSGEGSQVNSKTFFMGVYGSYGGNQYLSVNNGGEVNAREHISLGY
                     YDQRSDTTLVVSDGGKISAPKISLSTNSELALGAQEGSAAKAAGIIDAEKIEFVWAKT
                     SDKKITLNHTDKNATISADIVSGSEGLGYINALNGTTYLTGDNSAFSGKVKIEQNGAL
                     GITQNIGTAEINNRGKLHLKADDSMTFANKISGNGTISIDSGTVALTGNNYAFSGYID
                     VASGAVAVISEDKNIGRADLDVDGKLQINANKDWVFDNDLQGRGIVEINMGNHEFSFD
                     EFAYTDWFQGSLAFQNTTFNLEKNAEFLQRGGITAGQGSQVIVGKGAHSISTLGFSGG
                     TVDFGALTAGAQMTEGTVNVSKTLDLRGEGVIQVSDSDVVSSVSRDIDSALSLTEVDD
                     GNSTIKLVDAQGAEVLGDAGNLQLQDKNGQILSSSAQRDIQQNGQKAAVGTYDYRLTS
                     GVNNDGLYIGYGLTQLDLHATDSDALVLSSNGKSENAADLSAKITGSGDLAFSSQKGQ
                     TVSLSNKDNDYTGVTDLRSGTLLLNNDNVLGNTHELRLAAETELDMNGHSQTVGTLNG
                     SADSLLSLNGGSLTVTNGGTSTGSLTGSGELNIQGGTLDIAGDNSNLTANVNIANSAN
                     VLVSHAQGLGSANVENNGTLALNNSAEKRAAASVNYTLGGNLTNNGTLMTGMSGQQAG
                     NVLVVKGNYHGNNGQLVMNTVLNSDDSVTDKLVVEGDTSGTTAVTVNNAGGTGAKTLN
                     GIELIHVDGKSEGEFVQAGRIVAGAYDYTLARGQGANSGNWYLTSGSDSPELQPEPDP
                     MPNPEPNPNPEPNPNPTPTPGPDLNVDNDLRPEAGSYIANLAAANTMFTTRLHERLGN
                     TYYTDMVTGEQKQTSMWMRHEGGHNKWRDGSGQLKTQSNRYVLQLGGDVAQWSQNGSD
                     SWHVGVMAGYGNSDSKTISSRTGYRAKASVNGYSTGLYATWYADDESRNGAYLDSWAQ
                     YSWFDNTVKGDDLQSESYKSKGFTASLEAGYKHKLAEFNGSQGTRNEWYVQPQAQVTW
                     MGVKADKHRESNGTLVHSNGDGNVQTRLGVKTWLKSHHKMDDGKSREFQPFVEVNWLH
                     NSKDFSTSMDGVSVTQDGARNIAEIKTGVEGQLNANLNVWGNVGVQVADRGYNDTSAM
                     VGIKWQF"
BASE COUNT         6194 a         6755 c         5894 g         6520 t
ORIGIN      
        1 taatccgcaa atatgcgttt cagttaacgt ttcaggcaat gtttcaccgc gtttcattgc
       61 aacaattatg aaacaagact aaacccaata ttcggtttct taactttgcg gtgcgctatg
      121 gcacatccac cacggcttaa tgacgacaaa ccggttatct ggacggtatc tgtaacgcgc
      181 ctgttcgagc tgtttcgcga tatcagcctc gagtttgatc acctggcgaa cattacccct
      241 attcagcttg gctttgaaaa agcagtgacc tacatccgca agaaactggc aaacgaacgc
      301 tgtgacgcca tcatcgcggc tggctctaac ggcgcgtacc tgaaaagccg cctgtcagtg
      361 ccagttattt tgattaaacc gagcggctac gatgtgttac aggcactggc aaaagccgga
      421 aaactcacct cttctatcgg cgttgtcacc tatcaggaaa ccattccagc gctggtggcg
      481 tttcaaaaaa cctttaattt gcgcctcgat caacgtagct acattaccga agaagacgca
      541 cgcgggcaga ttaacgagct aaaagctaac ggcaccgaag cggtggtcgg cgcggggctg
      601 attaccgatc tggcagaaga agccggaatg accggaattt ttatctattc cgccgccacc
      661 gtgcgccagg cgttcagcga tgcgctggat atgacgcgca tgtcgttacg ccataacact
      721 cacgatgcca cccgcaacgc cctgagaact cgttacgtgc tgggcgatat gctcggtcaa
      781 tcaccacaga tggaacaagt acggcagact attttgctgt atgcccgctc cagtgcagcg
      841 gtgttgattg agggggaaac ggggacgggc aaagagctgg cggcccaggc gattcatcgg
      901 gaatattttg cccgccacga tgcgcgacag ggcaaaaagt cgcatccgtt tgttgcagtc
      961 aactgcgggg cgattgccga atcgctgctg gaagcagaac tgtttggcta tgaggaaggg
     1021 gcgtttaccg gctcgcgacg cggcggtcgc gccgggctgt ttgaaatcgc ccacggaggt
     1081 acgctgtttc tcgatgagat tggcgaaatg ccgctgccgt tgcagacccg gctgctgcgg
     1141 gtgctggaag aaaaagaggt cacccgcgtc ggcgggcatc agcctgttcc ggtggatgtg
     1201 cgggtcatta gcgccactca ctgcaatctg gaagaagata tgcggcaagg gcagtttcgc
     1261 cgtgacctgt tttatcggct gagtattttg cgtctgcaat tgccaccact gcgcgagcgg
     1321 gtggcggata ttctgccact ggcggaaagc tttttgaaag tgtctctggc ggcgctctcc
     1381 gccccgtttt ctgccgcatt acgccaggga ttacaggcaa gcgaaaccgt gctggtgcac
     1441 tacgactggc cgggcaatat tcgtgaactg cgcaatatga tggagcgact ggcgctattt
     1501 ttaagtgtgg aaccgacgcc ggatttaacg ccgcaatttt tgcagctgct actgccggaa
     1561 ctggcgcgcg agtcggcgaa aactcccgct ccacgcttac tgacaccaca acaggcactg
     1621 gagaaattta atggcgataa aacagcagcg gcgaattatt taggcatcag ccggacgacg
     1681 ttctggcggc ggctgaaaag ctgaactgcc gaatgcagcg cgaacgcttt atccggcata
     1741 aatttcaata gatgatgatc accgataaat ttacgcatcg gggatgttta cataggtttc
     1801 agaattactt cttcttataa atatttgccg tgccgtggat cttattgtca gtttgaccag
     1861 aggtcagtac caacacatca gccccttttt catccgcttt tttgatcaaa tcctctttcg
     1921 catctgcggt cgacatttca ttactggttg aaatatcacc tattttttca tactgcgatt
     1981 caactttttc aaattccgct ttggtcatca attcagcggc atagacattg gtaacggcaa
     2041 acgctaacgc accgactaac attttagaga ttattttcat attacggctc cagagttgtt
     2101 atcacactat cacccaccca cattattggg ttgattaata attagttcag tcagggcata
     2161 aaagccagta accggaaata agacactttg tgatctcttt cgcacccgat tatttttggt
     2221 agaaatatga tgaagttact tcacttattt atggatgaaa tcactatgga tcctttgcac
     2281 gccgtttacc tgaccgtagg actgttcgtg attacttttt ttaatccggg agccaatctc
     2341 tttgtggtag tacaaaccag cctggcttcc ggtcgacgcg caggtgtgct gaccgggctg
     2401 ggggtggcgc tgggcgatgc attttattcc gggttgggtt tgtttggtct tgcaacacta
     2461 attacgcagt gtgaggagat tttttcgctt atcagaatcg tcggcggcgc ttatctctta
     2521 tggtttgcgt ggtgcagcat gcgccgccag tcaacaccgc aaatgagcac actacaacaa
     2581 ccgattagcg ccccctggta tgtctttttt cgccgcggat taattaccga tctctctaac
     2641 ccgcaaaccg ttttattttt tattagtatt ttctcagtaa cattaaatgc cgaaacacca
     2701 acatgggcac gtttaatggc ctgggcgggg attgtgctcg catcaattat ctggcgagtt
     2761 tttcttagtc aggcgttttc tttgcccgct gtgcgtcgtg cttatgggcg tatgcaacgc
     2821 gttgccagtc gggttattgg tgcaattatt ggtgtattcg cgctacgcct gatttacgaa
     2881 ggggtgacgc agcggtgagc agataattta ctctctacgt aatcaacctg atttgccgaa
     2941 tcccggccat cggcgatgat agcccccgta atgcgtggtc cttatttccg ataagtttac
     3001 ttgagtcttt agcttcccat ttcagcccac tctcccctgt gtgggctttt ttcattggtc
     3061 tgacccgtcc tgaatagcca aacaatggca atgttccact ttgcagggat gataataagg
     3121 ggatctgatt cagaagagtt ttgaaaagtt ggaccgccat cgaggcctcg aaccccgtac
     3181 catacaacaa tcctggttgt cgtctgctct tcctgatgag ctaatggcgg tttttgatat
     3241 gagccttaca gcatattttc tgtcaggctt gagtgcgatg cgtaagatac agaaaagacc
     3301 ccacacaaac atgatggaat tatgattttt ttcatatgaa tgtcaaccca cacattcaca
     3361 aaacatctgc atgagatcat tttttataca ccgcatggct gcgaaaccac tactggtgct
     3421 tttttaagcg aagtgtcgcc gatcacaaca aaatatcggc gaaaaaagag atggaatgcc
     3481 agttggcata cagatataca gatgaaatga ttacctgcat tgcgattcac tctctggtgg
     3541 aataacaact tgcaggtgga accctttctg aactaaagag tgtagcggat tttaacgtgc
     3601 ttatttacag gataatatct gtcacctaat tcctgcactc tattcgatat ccattcattt
     3661 aatcgtgcgt catctctgta tgtttttacg tccagaacag agagcaataa catcaccagt
     3721 gattcaggag aaacagggtg gttatttttt aagtgtaata ataatccatg cgcaagcgcc
     3781 tgcttaatgg gcgcgtctgt ctccggaata gacgacattt cgcgaagcca tttttccaca
     3841 cgcatacact ctttcccttt agggaaaatt ctcagcaaag gcatatggtg ttcaagaaga
     3901 atacatttgc aatctgttcg cactgaatcg ataaactgca ctaatttctt aagcccggta
     3961 aagcgtccag cctgcacatt tgctttaata tcaagaaacg catcatcctg gtcatatacc
     4021 caaactgtcc ctttttgatt ttcaagtatg cgaaaaacaa acttaacctg gtgatcaggg
     4081 taatccatcc agtcataaaa tccagggaaa tcattaaact gcacatttat ggtgagtgcg
     4141 ttatcgtcta accactcaca gtctcgtacg gcagccatga gatgaatgag tttgtcgtca
     4201 tcgactaaat catcacgaca atcataagga taatcataat attgtttaat caaaaccttg
     4261 aatatatcga cacaggaaac cagggagctt ttgatatcct ctggtaactg attgttttta
     4321 accgtattaa gtatgctttg ttgcgtatat ggcatcaaat tattgtgcgg agcttttaat
     4381 gatatcatcg cgatctctct taaataaaaa taaacgtcgc agataataaa gctctcatta
     4441 aaccaggcac tatcagaaat cgctcataac taacgtgaga agtattgtgt actggaggga
     4501 gttaatttaa caatttgaat ttacgttata ggttttactg ctactttgat attatttcgc
     4561 tctccttaac taaaaagtta agtggagagc gaagttaata tgttaaacca cagggtattt
     4621 attaattttt tcagtctgtt agtgtgcgat tatcgataac aaaacgatat ttcacatcac
     4681 cacgcagcat tcgctcatag gcttcattaa tttgatcggc ccgaatcatc tctatatcag
     4741 ccacgatgcc atgttcggcg caaaaatcga gcatctcctg agtttctgga atgccgccaa
     4801 tcatagaacc ggctatcgca cggcgtttca tgatcaggtt gaaaacttcc ggcgatttat
     4861 gcggtgtcgc aggcgcacca accagcgtca tggtgccatc acgcttcagc aaggtggtaa
     4921 aatcgtcgag attatgtggc gcagctactg tattcaaaat gaaatcgaaa ctcttcagat
     4981 gagccgccat ctcatcggca ttgcgtgagt taacaacttc atcggccccc agggcttttg
     5041 ccgcttcgcg ttttgcctca gaagtggtaa atgccaccac atgcgccccc atcgcgtggg
     5101 ccagcttgat ccccatatgt cccagaccgc cgatgccgac cacgcccact tttttacccg
     5161 gcccggcctg ccagtgacgt agcggcgaat acgtggtgat ccctgcacac aacaaaggag
     5221 ccaccgccgc cagctgctct tgcgggtgac gaatacgcag aacatatcgc tcatgaacga
     5281 cgatctgttg tgagtagccg cccagagtat ggcccggttc gtccggcgtc ggcgagttat
     5341 aggtgccggt catgtgatca cagtagtttt ccagcccgtc ttcacactct tcgcaatgtt
     5401 tacaactgtc gacaatgcag ccgacaccga ccagatcgcc cggcgcatgt ttttctacct
     5461 gatcaccaac ggctaccaca cgccccacaa tttcatgacc cggtacgcag gggtaaaccg
     5521 tccccgccca ctcggaacgg acctggtgga gatcggaatg gcagacgcca cagtaagcga
     5581 tttcgatttt gacatcattc ggtcccggtt cacgccgtgt gatatccatc ggttcaagtg
     5641 gttgtttagc ggaatatgca ccaacagctt tgatcttcat tgtgtttact cctgattagc
     5701 tatgtgtatt tggcgacgcc tgatatgtca tcgcggcaaa acgcgtccat tgaatatagc
     5761 caatatttaa accacccgat ccagccccaa catgccgcga acctgaatga aacagagcag
     5821 caacgttccc cataaggcca tcgtcaggta ggggcttata ccgagaatat tgaagccgct
     5881 ttcaataatt tgcagaagaa acagcgccag caccatacca attatccgcc cgctgccgcc
     5941 gtccggatta accccaccga gtactgccgc gaggattgac accagcaagt acgattcgcc
     6001 ataagaggcc ttagccgagt tgagtttcga catcatcaaa aatgccgcta ccgcacaaag
     6061 caaggcggaa atgacataaa cccaaatcag cacccgacga gtgttaatgc cggagtaaag
     6121 tgttgctcgt tcgttagacc caatcaggta aatggcttta ccgagcggcg ttttctccag
     6181 caatatccat agccccagtg ccactgcggc aaacaaccac atcggtagcg gaataccgaa
     6241 ccattgcgca tgattcaacc acagcaccca tgagggataa ttggcaatgg cgctaccacc
     6301 tgtcaccaga atatttatcc ctttgagcaa cgtcatcatc ccaagcgttg caagaattgg
     6361 cgacactcga ataccagcaa tcaatacgcc gttacataaa ccgattatca ccgccgcgcc
     6421 agcgcccgcc agtaacgtag cgacaaccgt agcaataccc ggtggatact gagtcgccac
     6481 ccacgccatc accagtgaac aggcgttagc agtggctata attgacaagt taatgccacc
     6541 gcaaagcatg gtcaccgcca tagccaacgc cagaatgccc agcacgggca tttgcgaagc
     6601 gacggactgg aaattactta tcgaccagaa aatctccggc atagtaatgc tgaacgcggc
     6661 aacagttagc accagcaggc cgatcaagta aaactcaacg ttattacgcc acgatttttt
     6721 catagcagac tccggttctg atgctgactc cacgccgtgg cactaatgct ggcaacgatg
     6781 atgatgccgg tgatcaatgt ttgccagtaa gacgagactc ccaataaatt tagcccgttt
     6841 tgcatcactg ccaacaacac cacgccgagc aaagtaccgg ttaacgtgcc gcgcccgccg
     6901 agcaaactag tgccgccaag caccaccgca gccagtactg tcagctcata acccagaaga
     6961 gaatcggggg cgacagtcat caccgtccac gactgcacta cacccgcagc gccagacatc
     7021 aatcccatat agccatagac gaaaagttgc agtttcagca cgctaaagcc gatgcgactg
     7081 gctgattcgc ggttcccgcc aagggcataa attttgcgcc ctacactggt gaaattcatg
     7141 ataaacgctg ttagcagcac caccgtaatc atggcgatca gcggcagacc aaggccatag
     7201 tcatagccat cagcatcggt gtacttgaac aacataaccc cctgctcaaa ccacggcgga
     7261 aagtcgtaca gccacacacc tttactcaac cataacagca ggccatagaa aatattcagc
     7321 gtcgagatag tgatgatgat agaaggcacc cgtaggcgat taaccagtaa ggcgttaatt
     7381 aagccaagta aaatgccgat gcagcccgcc agtgcaaacg cgacagcgaa gttgccacca
     7441 attttttgca gcaacagcac catgccgtat tgcgcaatga tggtcattgc tggaaacgaa
     7501 atatcaattc caccggaaat caacaccaca aacaaaccac aggcgagaat agtcaacatg
     7561 gcatagttat tggcgagatc gtacaaatta ccgaatgtca gaaactcgtc gctgcgccag
     7621 gcaaggccaa caaacagcac cacaatcagt aatgccagcc agaattcatg gcgttttttc
     7681 agttcagcca tttaccacct ccgcaatcct ggcctgagaa ctgctgtcag gcaggaagct
     7741 atgggtgatc tgaccttttt gcattaccaa aatccggtgg ctttgatacc acgcttcttc
     7801 aatttcatcg cagatcatca ataccgcaat gccatgagcc gccagatcgc tgataatgcc
     7861 gtatattcct gctttgttgg cgatatcaac accgactgtc gggctatcga gaatcaacag
     7921 tcgtggccca atcgccagcc atttggcgat cgatactcgc tgcgcgttac caccagaaag
     7981 cgtattcacc ggaagatgag gatcagagac tttgatggtc aatgccttga ttagcctgtc
     8041 caccaggtca cgaactttag tttcactcag aaagccgaag cgatctttta ccttgtgaaa
     8101 aacagtgcta atgatgttgt cttcaataga ttgcgccatc accaaaccgc gcgacatgcg
     8161 atcttccgaa acataaccaa taccgtggcg gatagcgtcc tggttactat gcagtgtaac
     8221 cggctggccg ttgatgagga tctcgccagc atccggtcgg gtcataccaa acagactcag
     8281 acataattcc gtgcgccccg caccaagcag gccaacaatc gataccactt cgcccgcttc
     8341 cacccgcaag ttaatattta gatattcccc atgacgactt aaattacgca cctcaagcac
     8401 cggggtgctg gattttccct gccacaactc tcgcacctga tattcgaact cctggccggt
     8461 catcaggaaa ccgagttgtt ttgtggtcat ctctgcagcc ggaaaagtcc cgaccagctc
     8521 accatctttc agcactgaaa tacggtcgga aacttccatc acttcttcca gacgatgact
     8581 gacgaagacc acgcagatcc cgcgttcacg caattgatgc accacctgta ataacccttg
     8641 cacttcctga tgggtcagcg aagcggttgg ttcatccatc acgatcaacc gtgcgtcctg
     8701 cgccagtgca cggcaaatag ccaccagctg acagcgggca attgaaagct cagaaacgag
     8761 tgtatccagt ggcaatgtga cgttaatact ggtcattgcc gcctgcgcca cctcacgcag
     8821 acgacggcgg ttaacaaaca gaccgtggtg atagtgattc acggcgatat tctcccagac
     8881 actcaggtta ggaaataaag agaggtcctg ataaatcacc tgaatcccct gcgccaccga
     8941 agcggcgggt gtcagctttg accagttttt cccaccaagc gtaatttccg ctccctcatc
     9001 cgggcgataa acaccggaca taattttaat caacgtcgat ttaccacagc cgttttgccc
     9061 ggcaaggcag tgcacttcac ccgacataaa gtcgagagaa acatcgcgca gcgctcgcgt
     9121 ggcatgaaac gttttgttga tatgacgaag ggaaaggaaa gtttccataa catcccctgg
     9181 caataagaat cggggctttc gccccgaaga aatggattaa taaagtgagt cgatattgtc
     9241 tttgttgacc agtaatacct tatggaaacg gataattcgc ttatccatat ctacgtcggc
     9301 cttacccaga ttctgcattt ctaatccagg tttgatctct tcacccttca gcaacgtgct
     9361 ggcgacggct gcgagtgcgt aacctgcaga ggccggatcg taagtaatcc cttcggtgat
     9421 atcaccactt ttaatcagtg atgccgcctg tgaagggatc atcatgccat agactgcgac
     9481 tttatttttc gcccgtttct ctttcaccgc acgtcccgcg ccaatcggac cgtttgaacc
     9541 aaaggagaca accgctttca agtcaggata ggttttcatc aggtccagtg tggtacgacg
     9601 tgagtcatcc acactctcgg caaccggcat gcggcgggta acttcatgca tatccgggta
     9661 atgctctttc tggtatttca ccagcaagtc agcccataag ttatgctgcg gcacggtcaa
     9721 actacccacg taaatcacat agccgccctt gccccccatg cgtttcgcca tatgctcaac
     9781 atattcagcg gcaaattttt cgttatcaat gatttcaata tcccagttag cacttggctg
     9841 accgggggat tcgttggtca gaaccacaat tccggcatct cgcgcttttt tgaataccgg
     9901 ttccagcacg ttggcatcgt ttggcacgat agtaattgca ttaaccttac gggcgattaa
     9961 atcctcaata attttaactt gttgcggagc atcagtactt gaaggcccca cctgtgaggc
    10021 attaacacca aaggctttac ccgcctcaac cacaccttcg cccatgcgat taaaccacgg
    10081 cataccatcg actttagaaa tattcaccac gactttttcc gctgcctgga gcggcgcaga
    10141 aattagcgca gcgcctaata acagcgaaga caccatattg ataacaaaac gtttattcat
    10201 catttcagcc tcattgcagg gtagtcagga agtgttcgcc caaattagcg cgctggagag
    10261 aataagaatt ttcgaatatt tttatgcaga ataaacagcc ctatttcagg cagctattaa
    10321 aaatatggtt ataaatatgg acaaaacggg cagcaacaat aagtgtgaca ttcatcacgt
    10381 aaaaaatagc aaaataaaca aaattagcga tattttatgt gtgtgagttt atttcgcgta
    10441 gataaatagt tatctacaca acgtcaataa gggcatattc ttcaaatata acgtccattt
    10501 ctggtgaata gcttccttct gcctggaaaa aacgacggtg ttcattacgc caatattcaa
    10561 gactgaggtc accttcacct tccttacggg caagctccac ggtgacatca gaaaagcgca
    10621 gtaaatgcag gccaatcact ctgataacac atacaggctc atcacggcta ttttctacaa
    10681 tcttatactc accaatcatc ggaaatgcgt tgtcttcaat acatcccgcc agcgaaccac
    10741 aggaagctgt tttaacacca gtcgcaatca acgttgcgag gtgatcggcc aacgctgctg
    10801 aatcgccaaa agtacaaaag gaagcatggg gatatttttg tgagaatttt tcttttatgg
    10861 tcatggcaat atttttgcga ttacggaaaa acaaatcaca tcttaattac tgttggtaac
    10921 catcagcaag agtatcattg gtttttcgat actgaatctt ttttatccga agcaggtcac
    10981 atttatggcc tgataaatac ctttgttaaa actcactttt gtgtatttct ctcaaataat
    11041 cccctggaaa ttatgccgcg agattataaa gttcaggatc attcattagc aaaccattcc
    11101 cgccccactc cctggggctt aaatctctta caattcaccg ttgcaggcgt ttcaaatgcg
    11161 catcaacctg ccacactccc ccacaccagt tgccctttat ggaacgttgc ggttctcggc
    11221 gagatacgcg ccaccgcctc ggcggaacag gaggcgtcca ccagcacaaa gctggcatca
    11281 tcctgcgctt ttggccatac acgctcgcct ttttcattca gcggcaatat atcgccagtg
    11341 gctagaaaca gcgaacggga gaggttctgt tcgttaggac gaatatagag ctgcgcgtag
    11401 agattggctt tttccagcat gtcgcccaga ccataaggcg accagtggtc gataacgctg
    11461 tcagtgccag tcatcacttt tacgcctttg tcgtgcaact gtttgagcgg catatgcagc
    11521 gtgccaatcg gcaccgtcga ggcgatagaa atttgctgcg ccgccatccg attcgccagc
    11581 gcatcgacct gttgttcgtt gagcgtagcc agcgcaaagg cgtggctgat ggtcagctta
    11641 cctttcagtt gcggcgtttt ctctaccgtt tcaaccatat aattgatggc tgccacgccc
    11701 gacggagtgg tttcgtgcag gtgaatatcg acacctttgt cgtagtccag cgcaatctga
    11761 aacatggtgt cgagggattt ttccatcgcg ccatcgacac tggtcgggtc cagcccgccg
    11821 acgtaatgcg cacccgcctg catcgcttcg cgcattaagg gttccgattt cgacagcagc
    11881 aaaccgtgct gcgggaaggc gacgatttca cactcgaagc ccgcctgacg ccgcgccagc
    11941 accgcctgca aattttgcag attttttagg ccggaaaccg gttcgatatt gcagtggctg
    12001 cgggcaatgg tggtgccttt cgactgcaat agatcgatca gtttttccgc ccgctcctgc
    12061 gtatacggtt gtaactccgg cagcattttc tgctcaagct tgatcatgtc ctggatagtg
    12121 gtgcctgccg gacgattgag cgagcgccac ggcccgccgt agaaggtttt gtcgagatga
    12181 atatgcatgt cgcgagtggt gggtagcatc aacttaccgc cagcgtcata gtgcggcagc
    12241 gtggcgtccg gatgctgctt gttctcgcgc agggcgacaa ttttgccgtc ctgaatctcc
    12301 acggtctggc gcgccgtgcg ggtctgcacc gccacaccgt tttcgtagtc aaaaccggtt
    12361 tccagcagca cgttatcgag atagtaatgc gggtcagtga ttttcatggt gttgttcgct
    12421 tcgcagttta gggtgccagc taccgccgca tgggcgagcg gcacagaggt accaaacagc
    12481 gcggcggcgg tgaccatctt accgctctgg ctcagaaatt cacggcggct attgctttct
    12541 ttcatcctac gtccttacgt tttaataata tgggtgcccg tttcaccgcg cagcgccgca
    12601 ggcaggcatt ccggcgtggt gataatcact tctttgccgc cctgctccag gaacgtcagg
    12661 ctggcgatga tttttggcaa catgctgccg ggcggaaaat gcccttcctg catatagcga
    12721 gtcatggtgg caatatccac ccgatccagc gcctgctgct gcggtttacc aaagtggata
    12781 cagacttttt cgacgccggt ggtgatcacc agaatgtcgg cgtgaatttc acgggccagc
    12841 agcgcggtag agagatcttt gtcaataacc gcgtccacgc tttggtaatc ccccgcttca
    12901 gtacgcacta ccggaattcc accgccgccc gcgccaatta cgacaaaacc ttgttggatc
    12961 agcgccttaa tggcgggtgc ttcgacaata cgtttcggtt ccggcgaggc gaccacgcgg
    13021 cgatagcccc gtccggcatc ttcaacaaaa caccagtcag ggtttgcctt ttgtagtttg
    13081 tcacgctggc tttcactgaa gaatgcacca atgggcttgg tgggatgggc aaaacctgga
    13141 tcgtttttat ccacttccac ctgagttacc acggtgacgg cttttttctc gccgtgacgc
    13201 gccagccggt tattcagcgc ctgttggatc agatagccga tgccgccctg cgtatctgcc
    13261 acacagttcg ccagcggcgt taagggcagc ccttcgcgct cgtgggcaat ctccgcacgg
    13321 cgtaaatcca gcccgacctg cggcccgtta ccgtgggtca gcacaatgtc gtaatcggaa
    13381 gccagcattt ccagcaccgt atcggccacg gctttcaccg cctccgcctg atgctcaatc
    13441 gactggctgg cgttatcttt gataatgctg ttgccaccaa tggcaacgac cacaagctct
    13501 ttcatgttgt tatgtccgct acagagggtg attaggttat gaccaacgcc agactgcctg
    13561 atgcgctacg cttatcaggc ctacaattct cgggccatcc gtaggccgga taaggcgttc
    13621 acaccgcatc cggcataaac atgtaagtca gacgccgtaa cgttcgcacc agccgagaat
    13681 ggctttctcg aagcaggcga atggtggatg cacaatgccc gcgccaatca tgccgacgcc
    13741 cgcatcttta tgggcgatgg cggtgttgat caccggcaga atgccgctgc tacccacgcg
    13801 ggtgatgtcg attgccgacg gcacgcccat aaaaccgagc agcggaatgg tgacgttggg
    13861 gttttcgcca agggtgattt cgcgcatctg acgggagaaa tcgatagcct cttccaccgt
    13921 gccgcccacc agtgcgacga ttgcaggcgc ggtcgccatg gcaaacccgc caataccgta
    13981 ggtttctgtg atggcgctgt cgccgatatc cagccccgaa tcttccggct tataaccagc
    14041 aaacatcggg ccgatgacct gctgcgctgg gccggtaaac cactgccccg gcaggccgct
    14101 gacccgcagg ccgaactcga cgccgttacg cgccatggtg gtgaccacgg tgctgtattc
    14161 gatgccgtgc gccgcatcca tcgccgcttt acacatcgcc atccacgtcg ggccggagaa
    14221 gtagtcgctg ctggcgacaa actcgaacac ttcgcgctgt tgctcgacgg aatagcctgc
    14281 ctgaatgatc cccggcgtca gtgcctgaat cagcagcgtc gtcccggcgt tattgcggtt
    14341 atggcactca tcgcccatat gcagcgcctg cgccagcatt aagcgcagat cgatctcacc
    14401 gataattttc atcgcgtcgc gcagcattgg cccctgcaca tcgcgcatcc agttgaggcg
    14461 gtcgatcacg ctctgatcgt tggcacccat acgcaaaatc ttcgccatct gctcgctcat
    14521 attggtataa gcgatgttgc cgtaggtttt gtttttcacg atgtgcataa acatcgaggc
    14581 cgaggtaacg cccgccatcg atcccacgca gtcgtgttcg tggcacggcg agaaggtgat
    14641 ctccccggag gccgccagtt cagtcgcctc atcgagatct ttcgccagcc cttcgaacac
    14701 caacgccccg gtgaccgcgc ctttcatcgc gccgcacatt ttttcccagg tgatcggcgg
    14761 cccggcgtga agaatggttt tcggcgtcat gcccggcacc acgttaatcg cctgatcaaa
    14821 accaatcagc accggatgcg actggataat gcgctccagc gcctgctggt tagcggcggc
    14881 gattttgtct gccagcggcg aatcggcaat gttatccagc gcctgcacca cctgcatatt
    14941 gccctgcccc ggcggcgtcc agtcgagttg agtcacttct acatgctgct ttttcaggtc
    15001 atcgctaaac atggcgatac cgacgttaat aacgttcaac ggttggctaa acagtgactg
    15061 gctcatcagg cttcctcccc tttgcagata aattcacgcg ccagcaatcc ggtattggtg
    15121 ctgctgctcg ccagaatcac tccggcatca agcagcatct ggctttgttg ttctaatgat
    15181 ggcgtatcga gatcggtgcc cagcacatag gcgagaatga tcaactcgcg tccttcggcg
    15241 gcggcgatcg ctttcgcttc tttgatcgcc tcgatggtgg agccgaccgg atcttcatgc
    15301 gatccaaatc cgagcacaaa atccatcacg atcaccgcca cttctggatc gcgcgcttct
    15361 tcgatcaagc gactgatgcg gttggtgggg tcaatcattg gatgcggctt gccgttggtg
    15421 aagtcgtcat cgccaaagtc gaggaaggtg tgtttgatgc tgcggttgat atcttgcagg
    15481 cggaattcag gatcgggctg aatgttgctg tagacatcgc catgtttttc catcaccgcg
    15541 aacatggttt cgtcgcacag cgtgccgccg cagaacaggc cacgaatgta tttctgctgc
    15601 ggttgcagac gcgcacgcac atcagcaatc aacggctggt taagcgtatg caggtcgaga
    15661 ttttcctgtt tcacgccgga gagcatcacc gcttttagcg ccgcctcttt gctgccgcgg
    15721 gcaaactgta gcccctgctc atccaccggc gtttcaacgc gaccgaggaa gcagaccacc
    15781 accggcttgc ggcaggcacg tgcgcgttcc agcactttgc gggccaccgc aggcgcggga
    15841 ggttttgaaa tcagtgcgat aatttcagtt tgcggatcgt tttccagcat cccgatggcg
    15901 tcgagcatca tcaggccgcc gattttctcg ctcaggtcgc gcccgccggt gccaatcagt
    15961 tgtgaaacac cgccaccaaa ttcatgaatg cggacgctca gctcctggct gccggtgccg
    16021 gatgcgccaa caataccgat attgccgcga cgcacggcgt taccaaaaca gagcgccgcg
    16081 ccgttaataa tcgccgtgcc gcagtccggc cccatcatca gcagcccttt ttcgtgggcc
    16141 aactgcttga gcgccagttc atcttcaact gagacgttat cggaaaacag catcacgtta
    16201 aggtcgtttt gcagcgcctg acgcgcttcg cgagcggcaa acagaccgtt aaccgaaatc
    16261 accgccaggt tactttccgg gatatgcttt ttggcgctgg caatagtggc gtaacgcgcc
    16321 tcgtgcgagc cgctttgcgc tttgctgttg aacagttctt caatctccac cagcaactgt
    16381 tcgttgtccg cgcccgcttt gccgttgatg acaatcatca ggtcgccgtt tttcgcctgt
    16441 tccagctccg gcgtcagcag tcctaaattt ttcagtacac ctttgttcat ttcggtcgcc
    16501 atcgccacaa atgcctgctc gacgccgtcg agtttatttg cacgcgtgga gatagacatc
    16561 agcgagacag aatcaaaata ggtattcggt ttaatgacta ttttaactga cataattccc
    16621 tccgtaggtt tggctcagcg cacaaccatc ggccatgcca tacagcatgt cgcagccgga
    16681 actggagcca atatgtttaa ttttttctat tgcctgagtt gcgttcccag ggatgtcata
    16741 aataatgttg tgaataaaac gatgaatatt ttcccggcaa cgttgttgta atgcggcttc
    16801 cagcgttata gcacttaata atgtggtgtt atttctgccg cgctgcatac cgagataaaa
    16861 ttcctctttg tatttttccg acggatgccc gggaataaat aaaataagcg ccagacctgt
    16921 taaataatcg tcggctgatg gcgtaaggcc aatccctaac ccaatcatac tggcgaccgc
    16981 tgcggcgata ttttgttttt cgtttactgc ctgaataact gcccgtcgtt taatatgtag
    17041 ttctttattt aacgcctgat aaaacggatt atcgccgcga taattaaaca gggtttcatt
    17101 ttcccccagg tgctgatgaa taatgtcgtg ccactgtagc caggcgataa ggtgaaaatt
    17161 cacagcggtc atttgcaagg ttggggacag ccaacgccga caacgactca tctctatatg
    17221 aagatgttga ccaaccgtaa taccttgatc gtcaaactga accttatcac catgccggaa
    17281 cagatcatca aagtgagtga gtgccaaccg acaactgttt ggcgcattgt cgtactcttc
    17341 acaaagcagc gtcagcaact gctggcgagc cgggagtgcg atatttaccg ctctggcaaa
    17401 gacctgttca acctgtcctt gcccccgctg cgccagaaaa tccgcatccg cagttagcgc
    17461 ccacacacac cgtctttctg gtgtgttgat agcaagcctc ccggtttatg cacctgcggc
    17521 aatcagtaac tgcgcaatct cttcaaagcc ccgttcccgc gccagttcca gtggcgtttt
    17581 gccatattta tcggtcagat gcgggctggc accgtgttcc agcaataact gcacaatcgc
    17641 ctgctgttta ataccaccat cattaagcac aatcgcttcc agtagcggcg tccagcctac
    17701 atggttggtc tggttaacgt taatctccgt atgcgccaaa agctctttta caatacttaa
    17761 atggcctttt tcacaggcag gcgtcaggcc gacaccgcca aaacgggtta cgcaattaag
    17821 atcgggttta gccggtaaaa taattcgtag tagagttaaa tcatcgttca gacagctaat
    17881 taaaaaagga tttaaacagg tatgatcttg cttattaata tccgctccgg catcaattaa
    17941 tgcctgaacg caagcatatt gctgatataa acttgccagc gtaattgccg ttttcccctg
    18001 acgatcgcag gtattaatat cgacacccag cgcaaggcag gtttttactt tatcgatatc
    18061 accctgttgt gcagccaata aatagtcggc aggtagattt tttatactca ttcacattcc
    18121 cctggttttt gtggctgttt tcgatgaatt gagaatagca acgataatct gataaaagaa
    18181 cccgcttaaa tttaattcgc tgtatttcgc ctttttgttg aatgatgttc aacaatcttt
    18241 tcgcagtgtg cggtagtgca atatttgttt ctttgacccg ataacctttc actcaatcag
    18301 gttttatttc tctatagtct gcacatgtaa gagtagcttt cgtccatgtc taaccagagg
    18361 ggaacaagat gaacggactc acggcaacgg gtgtcaccgt cggtatttgt gcagggcttt
    18421 ggcagttagt gtcttcacat gtcgggctct ctcagggatg ggaattatta ggaaccattg
    18481 gcttcgtcgc cttttgcagt ttttatgccg caggcggcgg taaatcgggg tttatcagaa
    18541 gtctggcggt taattattcc gggatggtgt gggcattttt cgccgcgctg gctgccggtt
    18601 ggctggcctc tgtaagtgga ctgtccgcgt tctgggcgag cgtaattact accgtaccct
    18661 tctcggcggt agtggtctgg caagggcgtt tctggttact gtcctttatt cccggtggct
    18721 ttctcggcat gacgctgttt tttgccagcg ggatgaactg gacggtgacg ttactgggtt
    18781 ttctggcggg taactgcgtg gggataattt cagaatatgg tggacaaaaa ttaagcgaag
    18841 cgacgactaa acgcgacggg tattaaaagt tattcaaaaa tgattatcta tctttaaccg
    18901 atacctctac agtcatagct ggagaaattc atagtagata atggcgagaa tggtttaatg
    18961 aactcaattt ttaccgaaga gaatctgttg gcatttacta ccgctgcgcg ttttggcagc
    19021 ttcagtaaag ccgcagaaga gttgggttta accacttccg ccattagcta caccatcaag
    19081 cgtatggaga cggggctgga tgtggtgctg ttcactcgca gtacccgcag cattgagtta
    19141 acggagtccg ggcgttattt tttccgcaaa gctaccgacc tgctgaatga ttttcacgcc
    19201 atcaaacgca gtatcgatac tatttcgcag ggcatagaag cacgtgtgcg catttgtatt
    19261 aatcagctgc tttatacgcc caaacacacc gcacgcttgt tacaggtgct gaaaaagcag
    19321 tttcctacct gccagattac cgtcaccacc gaagtgtata acggcgtctg ggatgcgatt
    19381 attaataatc aggccaatat cgccatcggc gcacccgata cactactgga cggcggcggt
    19441 attgattaca ctgaaattgg cgcgattcgc tgggcttttg ctatcgcccc ggatcacccg
    19501 ttagcctttg tgccggaacc catcgccgaa agccaactgc gtctctaccc taatattatg
    19561 gtggaggaca ccgcgcatac gattaataaa aaagtgggct ggttgctgca cgggcaggag
    19621 tcaattctgg tgccagattt caacaccaaa tgtcagtgcc agattttagg tgaaggaatt
    19681 ggttttttgc cggattacat ggtccgtgag gcgatgacgc aatccctgct ggttacccga
    19741 caaatccata atccgcgcca ggattcgcgc atgttactgg cgactcagca ttctgctacg
    19801 ggtcaggtga cgcagtggat taaaaaacaa tttgcgccaa atggcatatt aacggggatc
    19861 tatcaggatt tactgcatcg ggagaattaa tcgctgccaa cctcccgatg cgctgtgaat
    19921 agcggtttac atcaaccacc tgctttcatt acccattcag agataaattt attacccggt
    19981 actggcggag agtacaaata gccctgcaaa aagtgaacgc ctttaccgat cattaaatcc
    20041 gcctgctcct gggtttctac cccttccgcc acgatactca gaccaggctt acgcgctagt
    20101 tcgacaatat tgtccacaat atgaccggag atttcgtcga cactcgccat ttgcacaaat
    20161 gacttatcga tcttaataaa atcgaccggg aacgcctgca agtaacgata ggtcgcataa
    20221 cccgtaccaa agtcatccag cgcaaaggta atgttgtgct gatgaaggct gtcaaatatc
    20281 gctctggctt ctggcgttac cggaatagga ttacgttccg ttagctcgag aaccagcttg
    20341 attttatcgt tacctaattt cttaaccagg ttcagacact ctttttcaaa tcccgctgcc
    20401 aaaaaacaac ccgccgagac gttgatgcca atatggaaat tgtccggcag caaatgtttt
    20461 accggcatca gaatatccgc agtctgtttc atcagttggc gggtcattat gacaataaga
    20521 ccggatgact ccgccagagg aataaactga tccggtggga taattcccgt ttgtggatgt
    20581 tcccagcgga caagtacctc acagcccgtc agtaccccag tctgcgcgca gaaaaccggt
    20641 tggatccacg gtttgaattc gtggttttcc aacgccagac tgatggcttc aggcgtgacg
    20701 atatggtgac aacggttatc agggatataa aaattatttt tatttcccgt gccactgatg
    20761 acttgcggat gatattgaaa aaagatatcc cgccagaagg taatatcact ctggatgcct
    20821 agtttttcat acagctgctt cttttgatgt gaaattgtct ttgcactgcg atttctgtac
    20881 tgtgagattt ctgtaaccga cattccctcc attagcagct tgagtaaaag ccgttctttt
    20941 tcggacacga taccaggcaa cgtcaaattc accgttgccc cgaactcttc caaaaaaaca
    21001 ctcaaatcat gcgaagccat tgaacacacc ttgattaaat cttgtgcgcc agctaaatct
    21061 gcgagtcttc actctgactg ataaagctgg ctgcaagaaa atgacacaga gagccgaatt
    21121 atctcccgtt cggctctctc tccttttact cattattcag atcagaattg ccacttaatg
    21181 ccaaccattg cagaggtgtc attatatccc ctatcggcaa cctgaacgcc cacattcccc
    21241 cagacattca ggttggcatt tagctgtcct tccaccccgg tttttatctc agcaatattt
    21301 cgggctccat cctgagtgac ggacacgcca tccatactgg tgctgaaatc cttactgtta
    21361 tgcagccagt tcacttctac aaacggctgg aactcgcggg atttaccgtc atccatttta
    21421 tggtggctct tcagccaggt ttttacgcca agtcgggttt gaacattgcc atcaccgttg
    21481 ctatgaacga gggttccgtt gctttcgcgg tgcttatcgg ctttgactcc catccaggta
    21541 acctgtgctt gcggctgaac ataccattca ttacgcgttc cctggctgcc attaaattca
    21601 gctaatttgt gtttgtatcc agcttccagt gaagcggtaa atccttttga tttataggat
    21661 tcactttgta agtcatcccc tttcactgtg ttatcaaacc agctgtactg cgcccaactg
    21721 tcgagatacg cgccattacg cgactcgtca tcggcatacc aggtggcata gaggccggtg
    21781 ctatatccgt tcacactcgc ttttgcacga taaccggttc gcgaggaaat ggttttactg
    21841 tcgctgttgc catatcccgc catgacccca acatgccagc tgtcgctgcc gttttggctc
    21901 cactgcgcga catcgcctcc cagttgcaga acatagcgat tgctttgggt tttcagctgg
    21961 ccgctgccat cacgccattt attatgacca ccttcatggc gcatccacat agaggtttgt
    22021 ttctgctcac ccgtcaccat gtcggtatag tacgtattac ccagacgctc atgcagacgc
    22081 gtggtgaaca ttgtattcgc tgctgcaagg ttcgcaatgt agctacccgc ctccggtcgc
    22141 aggtcattat ccacattcag atccggaccc ggcgtaggtg tcgggttagg gttcggctct
    22201 ggattcgggt ttggctccgg attcggcatc gggtctggct ccggctgcag ttcaggagaa
    22261 tcactgccgc tggtcagata ccagttacca ctatttgccc cttgtccacg cgcgagagtg
    22321 tagtcatacg cccccgcaac gatacgacca gcctgaacaa attcgccctc agacttaccg
    22381 tctacatgga taagttcgat accgttaagg gttttcgcac ctgtaccgcc agcgttattc
    22441 accgtaacgg cagtcgtgcc gctagtatcg ccctcgacaa ccaatttatc ggttactgag
    22501 tcatcgctat tcagtaccgt attcattact agttgaccgt tattaccgtg gtagttcccc
    22561 ttcaccacta acacattgcc agcttgctgt cctgacattc cggtcatcag cgtaccgttg
    22621 ttggtcagat tgccgcccag ggtgtaattc acagacgcag ccgctctttt ttcagcgcta
    22681 ttattcaacg ccagggtacc gttgttctca acgtttgcgc tacccaatcc ctgcgcatga
    22741 cttaccagga cattagccga attagcaatg ttcacattcg ccgtcaggtt gctgttatcg
    22801 cccgcgatgt ccagcgtgcc gccctgaata ttcagctctc cgctccccgt taacgaaccg
    22861 gttgaagtgc ccccgttggt aaccgtcaga ctgccgccat ttaagctcag cagtgaatcg
    22921 gcgctgccat tgagcgtgcc cacggtctgg ctgtgaccat tcatatccag ttcagtctct
    22981 gccgccagac gcagttcatg ggtattaccc aacacgttat cgttattcaa caaaagcgtc
    23041 ccactgcgca gatcggtaac accggtatag tcgttgtctt tgttagaaag cgatacggtc
    23101 tgacccttct ggctgctgaa tgccaggtca ccactgccgg taatctttgc gctgagatcg
    23161 gcggcattct cgcttttacc gttagagctc agcaccagag catcgctgtc ggtagcgtgt
    23221 aaatcaagct gggtcaggcc gtaaccgata tacagaccgt cattgtttac cccactcgtc
    23281 agacgatagt cgtaagtgcc gacggccgct ttttgcccat tctgctgaat atcacgttgg
    23341 gcactgctgg agaggatttg cccattttta tcctgcaatt gcagattgcc cgcatcgccc
    23401 agaacttccg caccttgcgc atcaaccaac ttaatggtgc tgttaccatc atcgacttca
    23461 gtgagcgata acgcagagtc aatatcacga gatactgagc ttacaacgtc actgtcagaa
    23521 acctgaatca caccctcgcc gcgcaaatcc agcgttttac taacgttgac cgtcccttct
    23581 gtcatctgtg cacctgctgt cagggcacca aaatcaacgg ttccgccgga gaatcccaaa
    23641 gtgctaatgg agtgagcgcc cttacccact attacctggc ttccctgacc cgcagtgatc
    23701 ccgcctctct gcagaaactc agcattcttt tccaggttaa atgtcgtgtt ctggaacgcc
    23761 agtgaaccct ggaaccagtc tgtataagca aactcatcga aggagaattc gtgattcccc
    23821 atgtttattt caacaatacc tctaccttga agatcgttat caaataccca atctttattg
    23881 gcattgattt gcagtttgcc atcaacatcc aggtccgcac ggccgatgtt cttgtcttca
    23941 gaaataaccg cgacagcacc agaagcgaca tcaatatatc cgctgaatgc atagttattg
    24001 ccggtcagtg ccactgtccc actgtcgata cttattgtac cattgccgga aatcttattg
    24061 gcaaaggtca tgctatcgtc agccttcagg tgtaatttcc cgcggttgtt gatctctgct
    24121 gtacctatat tttgggtgat ccctaaagcg ccattttgct caattttgac tttaccacta
    24181 aaggcagagt tatcaccggt taagtaagtc gtgccattga gcgcattgat atagcccagg
    24241 ccctcgctgc cactgacaat atccgcggaa atagtcgcgt ttttatccgt gtggtttaag
    24301 gtgattttct tatcggatgt ctttgcccac acaaactcaa ttttttcggc atcaataatc
    24361 cctgcagcct tcgcagcact tccttcctgt gcacctaacg ctaactcaga gttggtgctt
    24421 aaactaattt tcggtgcgga tattttacct ccatctgata cgactaatgt tgtatcagaa
    24481 cgttggtcgt aataacccag gctaatatgt tcacgagcat taacttcacc gccgttatta
    24541 actgacaggt actgattacc accgtaactg ccgtaaacgc ccataaagaa ggttttagaa
    24601 tttacctggc tgccttcacc actgacattt ccctgcaaat aggtcagacg gctggtgccc
    24661 ttaacatgga ttttgccgcc gttggagaca ttaaaatagc cgcgatcgtg tctcatgcct
    24721 gagtttgact catacaaatc atcagcatat aactcgctgc cagcattgga gacattcagg
    24781 aaccccgtac ctttcagcaa aaagttaagt gggccattga tagttacctt tcctccggta
    24841 atatccaacc caccaccaga agcgagagtc agacgcggac gggaagtatc tgtcgcattg
    24901 attaccagat tggcattgtc agtcaccgta atacggtaat cgatgctctg gttctctttg
    24961 ccaaaatcaa tagttttatc ctggtttacg atgacatcat cggcgaatac cagagatgaa
    25021 tataaactta tcgcgctaat taaaacagcc cgggactttt ttccttttac tctgctcccc
    25081 agctccgagc agacgctcca acagttacgg gacctgttcc actttagccg atatatttta
    25141 ttcatcacaa tctccagcaa tacatccaaa taaaaccaag attgcataaa cagcaacgca
    25201 ttaaatgcca ttctggttac tgttcatcgc atataaaaat tcaaaaattt tgcatagcat
    25261 tggcaaccac atatctgagt atgtagttca gagggtaata aaatagcaag ttattactta
    25321 aaacttattt taagttaaca ctcttaactt tatcattaca ttc
//
LOCUS       DAPGWB010000061        25051 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.061, whole genome shotgun sequence.
ACCESSION   DAPGWB010000061 DAPGWB010000000
VERSION     DAPGWB010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 25051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25051
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.061"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..1113
                     /locus_tag="RHX79_002377"
     CDS             <1..1113
                     /locus_tag="RHX79_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDV2197535.1"
                     /translation="LILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIF
                     RQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSL
                     YVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCN
                     LLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNR
                     RYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRP
                     DDILARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTV
                     FSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI"
     gene            1294..2784
                     /locus_tag="RHX79_002378"
     CDS             1294..2784
                     /locus_tag="RHX79_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDV2197536.1"
                     /translation="MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQ
                     KADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHK
                     YPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDL
                     NDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQN
                     VMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIII
                     NQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHF
                     RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDT
                     LGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL
                     QHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS"
     gene            2827..3330
                     /gene="yeaK"
                     /locus_tag="RHX79_002379"
     CDS             2827..3330
                     /gene="yeaK"
                     /locus_tag="RHX79_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mischarged aminoacyl-tRNA deacylase"
                     /protein_id="HDV2197537.1"
                     /translation="MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRG
                     TALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDEL
                     TGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPEL
                     LNFRRTA"
     gene            complement(3331..3435)
                     /locus_tag="RHX79_002380"
     CDS             complement(3331..3435)
                     /locus_tag="RHX79_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416302.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197538.1"
                     /translation="MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG"
     gene            3605..4051
                     /locus_tag="RHX79_002381"
     CDS             3605..4051
                     /locus_tag="RHX79_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HDV2197539.1"
                     /translation="MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFP
                     WIEKQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRG
                     VTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ"
     gene            complement(4008..4829)
                     /gene="nimR"
                     /locus_tag="RHX79_002382"
     CDS             complement(4008..4829)
                     /gene="nimR"
                     /locus_tag="RHX79_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NimR"
                     /protein_id="HDV2197540.1"
                     /translation="MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLI
                     LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTC
                     CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKI
                     RTMVEMMAKEPVEWGSLGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG
                     LVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAGLTTVSPQSAKPDPRQ"
     gene            4926..6107
                     /gene="nimT"
                     /locus_tag="RHX79_002383"
     CDS             4926..6107
                     /gene="nimT"
                     /locus_tag="RHX79_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-nitroimidazole transporter"
                     /protein_id="HDV2197541.1"
                     /translation="MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAY
                     SLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPY
                     LLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLA
                     LNGFGWQGALFMLTCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTL
                     FLGINSLVYYVIIGWLPAILISHGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQ
                     RGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAA
                     ALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEI
                     R"
     gene            6162..6509
                     /locus_tag="RHX79_002384"
     CDS             6162..6509
                     /locus_tag="RHX79_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HDV2197542.1"
                     /translation="MNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEI
                     TPSTELRKAFHGEVVDFATFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQ
                     NHALVLADWLRSL"
     gene            complement(6531..6785)
                     /gene="yoaF"
                     /locus_tag="RHX79_002385"
     CDS             complement(6531..6785)
                     /gene="yoaF"
                     /locus_tag="RHX79_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing lipoprotein YoaF"
                     /protein_id="HDV2197543.1"
                     /translation="MKIISFALPCLLVLAGCSTSSQPEAPKPPQIGMANPASVYCQQK
                     GGTLIPVSTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK"
     gene            6968..7993
                     /gene="dgcP"
                     /locus_tag="RHX79_002386"
     CDS             6968..7993
                     /gene="dgcP"
                     /locus_tag="RHX79_002386"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcP"
                     /protein_id="HDV2197544.1"
                     /translation="MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKV
                     DVEARLQHIMFARNSQKMHIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAAR
                     NLGITTFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALV
                     EQLREANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKL
                     INDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERI
                     QQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMYQEKKHKQKTPFV
                     AHPALHS"
     gene            8026..8124
                     /locus_tag="RHX79_002387"
     CDS             8026..8124
                     /locus_tag="RHX79_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaK family small membrane protein"
                     /protein_id="HDV2197545.1"
                     /translation="MRIGIIFPVVIFITAVVFLAWFFIGGYAAPGA"
     gene            8127..8201
                     /gene="yoaJ"
                     /locus_tag="RHX79_002388"
     CDS             8127..8201
                     /gene="yoaJ"
                     /locus_tag="RHX79_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YoaJ"
                     /protein_id="HDV2197546.1"
                     /translation="MKKTTIIMMGVAIIVVLGTELGWW"
     gene            complement(8260..8508)
                     /locus_tag="RHX79_002389"
     CDS             complement(8260..8508)
                     /locus_tag="RHX79_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDV2197547.1"
                     /translation="MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGG
                     WISTLFGFGKVDGFNFGSFVVAVIGAIVVLFIYRKIKS"
     gene            complement(8735..9943)
                     /locus_tag="RHX79_002390"
     CDS             complement(8735..9943)
                     /locus_tag="RHX79_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV2197548.1"
                     /translation="MKRLQAFKFQLRPGGQQEREMRRFAGACRFVFNRALARQNENHE
                     AGNKYIPYGKMASWLVEWKNATETQWLKDSPSQPLQQSLKDLERAYKNFFRKRAAFPR
                     FKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNSRQVTGVVKNVTVSQSCGKWY
                     ISIQTESEVSTPVHPSASMIGLDAGVAKLATLSDGTVFGPVNSFQKNQKTLARLQRQL
                     SRKVKFSNNWQKQKRKIQRLHSRIANIRRDYLHKVTTTVSKNHAMIVIEDLKVSNMSK
                     SAAGTVSQPGRNVRAKSGLNRSILDQGWYEMRRQLEYKQLWRGGQVLAVPPAYTSQRC
                     ACCGHTAKENRLSQSQFRCQVCGYTANADVNGARNILAAGHAVLACGEMVQSGRSLKQ
                     EPTEMIQATA"
     gene            9951..10913
                     /gene="tnpA"
                     /locus_tag="RHX79_002391"
                     /pseudo
     CDS             9951..10913
                     /gene="tnpA"
                     /locus_tag="RHX79_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001349736.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            complement(11122..11760)
                     /gene="leuE"
                     /locus_tag="RHX79_002392"
     CDS             complement(11122..11760)
                     /gene="leuE"
                     /locus_tag="RHX79_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine efflux protein LeuE"
                     /protein_id="HDV2197549.1"
                     /translation="MFAEYGVLNYWTYLVGAIFIVLVPGPNTLFVLKNSVSSGMKGGY
                     LAACGVFIGDAVLMFLAWAGVATLIKTTPILFNIVRYLGAFYLLYLGSKILYATLKGK
                     NNEAKSDEPQYGAIFKRALILSLTNPKAILFYVSFFVQFIDVNAPHTGISFFILATTL
                     ELVSFCYLSFLIISGAFVTQYIRTKKKLAKVGNSLIGLMFVGFAARLATLQS"
     gene            complement(11887..12810)
                     /gene="dmlR"
                     /locus_tag="RHX79_002393"
     CDS             complement(11887..12810)
                     /gene="dmlR"
                     /locus_tag="RHX79_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310535.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator DmlR"
                     /protein_id="HDV2197550.1"
                     /translation="MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLE
                     QTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISS
                     FGFGRQVVAPALSALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARK
                     LATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGHHAIKV
                     TGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVS
                     RLATSAKVRITVEFLRQYFAEHYPNFSLEHA"
     gene            12913..13998
                     /gene="dmlA"
                     /locus_tag="RHX79_002394"
     CDS             12913..13998
                     /gene="dmlA"
                     /locus_tag="RHX79_002394"
                     /EC_number="1.1.1.83"
                     /EC_number="1.1.1.85"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional
                     D-malate/3-isopropylmalate/tartarate dehydrogenase"
                     /protein_id="HDV2197551.1"
                     /translation="MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFALSFEQME
                     WASCEYYSHHGKMMPDDWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQ
                     YVNLRPVRLFPGVPCPLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQES
                     VFTRRGVDRILRYAFELAQSRPRKTLTSATKSNGLAISMPYWDERVEAMAENYPEIRW
                     DKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFP
                     SLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIA
                     HGPKTPDMKGNATTPQVADAICKIILR"
     gene            14249..15859
                     /gene="yeaV"
                     /locus_tag="RHX79_002395"
     CDS             14249..15859
                     /gene="yeaV"
                     /locus_tag="RHX79_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter YeaV"
                     /protein_id="HDV2197552.1"
                     /translation="MMSNVKKKDVPLISISLVAILFIAAALSLFPQQSADAANAIYTF
                     VTRTLGSAVQVLVLLAMGLVIYLATSKYGNIRLGEGKPEYSTLSWLFMFICAGLGSST
                     LYWGVAEWAYYYQTPGLNIAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFH
                     VRKNKGLSLSGIIAAITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSA
                     LTGLPDNFTVQAFVILLSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPT
                     EFITNSIINAIGLTTQNFLQMSLFTDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTR
                     VSRGRKIKEVIWGLILGSTVGCWFFFGVMESYAIHQFINGVINVPQVLETLGGETAVQ
                     QVLMSLPAGKLFLAAYLGVMIIFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRLFWC
                     VVITLIPLSILFTGASLETMKTTVVLTALPFLVILLVKVGGFIRWLKQDYADIPAHQV
                     EHYLPQTPVEALEKTPVLPAGTVFKGDN"
     gene            15891..17015
                     /gene="yeaW"
                     /locus_tag="RHX79_002396"
     CDS             15891..17015
                     /gene="yeaW"
                     /locus_tag="RHX79_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaW"
                     /protein_id="HDV2197553.1"
                     /translation="MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFA
                     KSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGK
                     AKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPN
                     ATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPG
                     FSDSVQVDRYWHTMHGNWTLQYGFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPI
                     KGMMTVIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQK
                     GLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD"
     gene            17071..18036
                     /gene="yeaX"
                     /locus_tag="RHX79_002397"
     CDS             17071..18036
                     /gene="yeaX"
                     /locus_tag="RHX79_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaX"
                     /protein_id="HDV2197554.1"
                     /translation="MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHII
                     VQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGDRLTISTP
                     NNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELV
                     QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIVAD
                     TLHFEQFAIEDKTGDAFTLVLARSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCG
                     TCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL"
     gene            complement(18090..19205)
                     /gene="rnd"
                     /locus_tag="RHX79_002398"
     CDS             complement(18090..19205)
                     /gene="rnd"
                     /locus_tag="RHX79_002398"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310540.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HDV2197555.1"
                     /translation="MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFD
                     GEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQIL
                     AAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITA
                     KLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLAD
                     WRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVE
                     KAQTLPEEALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLL
                     NWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ"
     gene            complement(19287..20972)
                     /gene="fadD"
                     /locus_tag="RHX79_002399"
     CDS             complement(19287..20972)
                     /gene="fadD"
                     /locus_tag="RHX79_002399"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HDV2197556.1"
                     /translation="MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVN
                     MGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVV
                     NVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAK
                     GTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT
                     GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELG
                     GQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGG
                     MPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLV
                     DDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRI
                     VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL
                     TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA"
     gene            complement(21177..21758)
                     /gene="yeaY"
                     /locus_tag="RHX79_002400"
     CDS             complement(21177..21758)
                     /gene="yeaY"
                     /locus_tag="RHX79_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein YeaY"
                     /protein_id="HDV2197557.1"
                     /translation="MAVHKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRV
                     MSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVN
                     GFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI
                     DPWFYGGRGWPYGYGGWGWYNPGPARVQTVVTE"
     gene            complement(21798..22493)
                     /gene="tsaB"
                     /locus_tag="RHX79_002401"
     CDS             complement(21798..22493)
                     /gene="tsaB"
                     /locus_tag="RHX79_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HDV2197558.1"
                     /translation="MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQD
                     ILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGA
                     WRKNGATRVLAAIDARMGEVYWAEYQRDENGIWHGEETEAVLKPELVHERMQQLSGEW
                     VTVGTGWQAWPDLGKESGLVLRDGEVLLPAAEDMLPIACQIFAEGKTVAVEHAEPVYL
                     RNNVAWKKLPGKE"
     gene            complement(22551..24461)
                     /locus_tag="RHX79_002402"
     CDS             complement(22551..24461)
                     /locus_tag="RHX79_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HDV2197559.1"
                     /translation="MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVE
                     AGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKG
                     RSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPL
                     VTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPE
                     ADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA
                     QSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDA
                     AFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSW
                     IFTSATLSVNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVPRNLPQTNQPGSAR
                     QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV
                     SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFD
                     EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIA
                     RAVRFLAIPSSR"
     gene            24593..24937
                     /locus_tag="RHX79_002403"
     CDS             24593..24937
                     /locus_tag="RHX79_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDV2197560.1"
                     /translation="MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLA
                     QIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNP
                     KYKVEIKIVAAV"
BASE COUNT         6099 a         6401 c         6089 g         6462 t
ORIGIN      
        1 ctcattttaa gccttgcatt tttaagtggc cttatctatt tagttgaaac cattgtaatt
       61 atccataaac caattaacgg cagtacactg atccagacaa agtcgaatga tgtttctatt
      121 ttctatattt tccgccaact cagttttatt tgtttaacct cgctggcact cttttgttat
      181 ggaaaagaca acatccttga caacaataag aaaaaaacgg gaatcctgtt gctggcgctg
      241 attccttttt tagtttttcc ccttctggca cacaatctga gcagttataa cgctgactat
      301 tctttgtatg tcgtcgacta ctgtccggac aaccatactg cgacctgggg aatcaactat
      361 acaaaaatat tggtttgtct gtgggcattt ttactgttct ttattatcat gcgtacacga
      421 ttagccagcg aactatggcc gttaatagca ttattatgtc tggcatcgct atgctgcaac
      481 ttacttctac tgactctgga tgagtataat tacaccatct ggtatatcag tcgcgggatt
      541 gaagtttcca gtaaactgtt tgttgtgtct tttctgattt ataacatttt tcaggaactg
      601 caactctcca gcaaactggc agttcatgat gtgctgacca atatttataa tcggcgctac
      661 tttttcaaca gcgtagagtc attattgtcg cgacctgttg ttaaggactt ctgtgtcatg
      721 ctggttgata ttaatcagtt caaacgcatc aatgcccaat ggggacatcg tgtgggtgat
      781 aaagtgctgg tttcaattgt cgatattatc cagcaaagca tccgccctga tgatatttta
      841 gcgcgactgg agggtgaggt gtttggcttg ctatttaccg aactcaatag tgcccaggca
      901 aaaatcattg cggaacgtat gcgtaaaaat gtcgaactcc tgaccggctt tagtaacaga
      961 tatgatgttc ctgaacaaat gaccatcagt attggcacgg ttttttcaac gggtgacacg
     1021 cgtaatatct cgcttgtcat gacggaagca gataaagcct tacgcgaagc gaaaagcgag
     1081 gggggcaaca aagtgattat tcatcatatt taagtgcaaa aatattcaga gccatgcttt
     1141 ttgcgtggct tttgcataca atttattact attaccccta aatttcccct ccccagcggc
     1201 gcagagatga gtataattag cgcccctgtg ccaggccgca atcgaacttt atctggtttt
     1261 ctcgtttcac taaccgaagg agtgccattt atcatgaaat tgcaccatag aatgctccgg
     1321 cattttatcg ccgcaagtgt cattgtgctg acatcttcct tccttatttt tgaacttgtc
     1381 gccagcgaca gagcaatgag tgcctatctg cgctatatcg tgcagaaagc agactcctcc
     1441 tttctttatg ataagtatca gaatcagagt attgccgcgc atgtgatgcg cgctctcgct
     1501 gctgagcagt cggaagtgtc gccagaacag cggcgcgcca tctgcgaggc ttttgagtct
     1561 gccaataata cccatggctt aaacctgact gcccataaat acccgggctt acgcggcaca
     1621 ctacaaaccg catccactga ctgcgacaca attgtggaag ctgcagcact attacccgct
     1681 tttgatcagg cagtggaagg caaccgccac caggatgatt acggttcagg tcttgggatg
     1741 gccgaagaga aatttcacta ttatctcgat ctcaatgacc gctatgtcta tttttatgag
     1801 ccggttaatg ttgaatactt tgcgatgaat aactggtcct tcctgcagtc aggaagtatt
     1861 ggtatcgatc gcaaagatat tgaaaaggta tttaccgggc gtaccgtatt gtcgagcatt
     1921 taccaggatc agcgtactaa acagaacgtg atgagtttgc tgacgccggt gtatgttgca
     1981 gggcagctaa aagggattgt gctgctggat attaacaaaa acaatttgcg gaatatcttt
     2041 tacactcatg accgccctct cctctggcgt tttctcaatg tcacgctaac cgataccgat
     2101 tcggggcgcg acattatcat caaccagagc gaagataatc tgttccagta tgtcagttac
     2161 gtccatgact taccgggcgg cattcgtgtc tcgttatcca ttgatattct ttactttatc
     2221 acgtcttcgt ggaaaagcgt tctgttctgg attttgacgg cgttaatttt gctgaatatg
     2281 gtccggatgc acttccgttt ataccaaaat gtgtcgcgag aaaatattag tgatgcgatg
     2341 actggactgt ataatcgcaa aattttaacc cctgaactgg agcagcggtt gcagaaactg
     2401 gtgcaatccg gttcttcggt gatgtttatt gcaattgaca tggacaagtt aaagcaaata
     2461 aatgacaccc tcggtcatca ggagggggat ttagcgatta cgttattagc tcaggcgatt
     2521 aaacaatcga ttcgtaaaag tgattatgcc atccgactcg gtggcgatga attctgcatc
     2581 attcttgtcg attcgacgcc gcaaattgca gcacaactgc ctgaacgtat cgaaaaacgt
     2641 ctgcaacata tcgcgccgca gaaagagatc ggcttctctt ccggtattta cgcgatgaaa
     2701 gaaaacgata cgttacatga tgcgtataaa gcttccgatg agcgtttata tgtcaataag
     2761 cagaacaaaa acagccgttc atgataacct tctgtggttg tttgcttgta atctcaggag
     2821 cgtgaaatga ctgaaatggc taaaggaagc gtgacgcatc agcggttaat cgctttatta
     2881 tcacaagaag gtgctaactt ccgcgtcgtt acccatgaag cggtaggtaa atgtgaagcg
     2941 gtgtcagaaa ttcgtggcac cgctttaggc cagggagcta aggcactggt atgtaaagtc
     3001 aaaggcaatg gcgtaaatca acatgttctg gcgatcctcg ctgccgatca acaggccgat
     3061 ctgagccaac tcgccagcca tataggcgga ttacgcgctt cgttggccag cccggcggaa
     3121 gtcgatgaac tcacaggctg tgtcttcggc gcgatccccc ctttcagctt ccatccaaaa
     3181 ctcaaactgg ttgccgaccc tctactcttc gaacgatttg atgaaatcgc cttcaatgca
     3241 gggatgctgg ataaatccgt tattttgaaa accacggatt atttgcgcat tgcgcaacca
     3301 gaactgctca atttccgccg cactgcgtaa ctagcctgtc cgttcaataa gcagaacgga
     3361 caaaaccagc acaacagcaa tggcaaaaaa cgatgacgtg ataatcagtg tctcgacgaa
     3421 catttgatcg ttcatagcat gcccccggga gatagctgtt ttcacgttat tgttagcgtg
     3481 cacaaatggc agtttgatga cagttcgcct gattttttat gcaaaaaacg taaagatttt
     3541 ctacttcctt cctgcagcaa gcgtaaagta agcaggctta ttattttttg gcaaggaaac
     3601 cacgatgttt gatgtcactt tgctgatcct gctcgggtta gctgcgctgg gctttatcag
     3661 tcataacacc actgtcgccg tttcaattct ggtgttgatc attgtccgcg tcacaccgtt
     3721 aagcaccttt ttcccgtgga ttgaaaaaca ggggctaagt atcgggataa tcattctgac
     3781 gattggcgtt atggccccca tcgccagcgg gacgctaccg ccctcaacct tgattcactc
     3841 gtttctgaac tggaaatcgc tggtggcaat tgcagtaggc gttattgtct cctggctggg
     3901 tgggcgcggc gtgaccttaa tgggcagcca gccgcaactg gtcgccgggc tgctggtagg
     3961 cactgtttta ggcgtggcgc tgtttcgcgg cgtaccggtc ggcccgctta ttgccgcggg
     4021 tctggtttcg ctgattgtgg ggaaacagta gttaatcccg caatatatcg gcctggcgtt
     4081 tgccccaggc ctttcttaaa catagtaata aaggccgttg ttgaatcata ccccagcgta
     4141 tgagcaactt tctgtacagt atcgcctttc actaatccct gaagtgccat aatcagctgt
     4201 aactgctgac gccactggcg aaaactcaac cccgtctctt tcactatcag ccgggcaaga
     4261 ttgcgttcac tcatcgcaaa aaagccagcc cattgcccca atgagcccca ctcgacgggc
     4321 tctttcgcca tcatctccac catcgtgcgg attttaggat gagaagaaac gggcaagtgc
     4381 agctgttgtt gtggctgctg agggagttca tcaaacagga cctgaattaa tctgcgggtc
     4441 atcggctcag cacgctgagt cgtcgtcctg tttgccaggg ttaaaatcaa ttcccggcat
     4501 aagggcgata ttttcaatgt gcaacatgtt gtcggcattg tcactgcgct gggttcgata
     4561 aacagaaaac agagttcagc gttagctgtc acttgattgc tatgttccac cccgcccggt
     4621 atccaaaccg catattgcgg cggcaccatc cacaaagcat tttccaccgt acaggtaatt
     4681 gcaccatgta atgctagtat cagctgtcct ttgcggtgct gatgtacagg actggttaac
     4741 tcatccgttc cggcgtgaat acaaaatgcg accgcggctt catggtgtcg gtcgggttca
     4801 tagccattga gattcaacct gtgcatcatt ttgtccgaat ttagcgataa tttgtcattt
     4861 tagcttgatt caacataaca ataaaaacgg taaggtacag cctcgtttgt aacaatgaga
     4921 agcatatgac ctgttcaact tcattaagcg gcaaaaacag gattgtcctt atcgctggca
     4981 ttctgatgat tgccacaaca ttacgcgtca cctttaccgg cgcagcgccg ttactggata
     5041 cgattcgttc cgcttactcg ctgacgacag cgcaaaccgg cttattaacc accctgccat
     5101 tattggcctt tgcgctaatc tcacctttgg ctgccccggt ggcgcgacgt tttggtatgg
     5161 aacgtagcct gtttgccgcg ttacttttga tctgtgcagg tatcgcaatt cgttctctcc
     5221 cttcgcctta cttattattt ggcggtacag cggtcattgg cggtgggatt gcattaggca
     5281 atgtcttact gccaggatta attaaacgcg atttccctca ttccgtcgcc agacttaccg
     5341 gcgcatattc cctgacaatg ggagctgcag cggcactggg atcggctatg gtcgtgccgc
     5401 tggctttgaa cggttttggc tggcaaggcg cgttgttcat gctgacgtgt tttcctctgc
     5461 tggctctttt tttatggctg ccacagtggc gaagccaaca acatgcaaat ttgagtacct
     5521 cgcgcgcctt acatactcgg ggtatctggc gttcgccgct tgcctggcag gtcacattgt
     5581 ttcttgggat caactcactg gtctattacg tgattattgg ctggcttccg gcgatcctca
     5641 tcagtcacgg ctatagcgaa gcacaggcgg gttcactgca tggtttgctg caactagcta
     5701 cagcagctcc cggtttgctg atccctcttt tcttacatca tgtgaaagat cagcgtggta
     5761 ttgcagcgtt cgttgccttg atgtgcgcag tgggcgctgt tgggctctgc tttatgccag
     5821 cgcacgcgat cacctggact ctgcttttcg gttttggttc cggcgcaaca atgatactgg
     5881 ggttgacgtt cattggtctt cgggcaagtt ctgcgcatca ggcggcggca ctctcgggga
     5941 tggcacaatc cgtcgggtat ttgctggcag cctgtgggcc gccgctaatg ggtaaaatac
     6001 acgatgctaa cggtaactgg tccgtaccac tgatgggtgt tgcaatactt tcactactga
     6061 tggcgatttt cggactttgc gccgggagag acaaagaaat tcgctaatat ccggtgctat
     6121 agtgacgtga caaatcatgc gtgaaaggga gaacaaacac gatgaatatt cagtgcaaac
     6181 gcgtttatga tccggctgaa cagagcgatg gttatcgcgt actggtcgac cgcctctggc
     6241 cgcgcggtat caaaaaaacc gatttagccc ttgatgagtg ggataaagaa atcacgccgt
     6301 caacggaact gcgcaaagcc tttcacggcg aagtcgtcga ttttgcaacc tttcgcgagc
     6361 aatatcttgc agaactggcg caacacgagc aagaaggaaa gcggctggcg gacatcgcca
     6421 aaaaacagcc gctgaccctg ctctacgcag caaaaaacac cacgcagaac catgcgctgg
     6481 tgctggccga ctggctacgt agcttgtgat tttagtacag catccggcgg ttatttttca
     6541 ccagccggat ggtcccgtcg ccacaatgcc cattcatcaa tcgtttcacc gcccggtaat
     6601 ttgcaattgt tgctgacccc ttgcgctgtc gacactggaa tgagcgtccc gcccttctgc
     6661 tggcaataga ccgacgccgg atttgccata ccaatctgcg gcggtttagg tgcttctggc
     6721 tgagaagagg ttgaacaacc agccaggacc agcaagcaag gcaaagcaaa actgataatt
     6781 ttcatttatt gatctcacac atttatctac gcttagagta tcgcggtatc gttttgtttt
     6841 gcagcactat ttttattaca ttcactcaaa acatattacg tcttgtttca tctttgttga
     6901 tgatgtttta tcatgcctgc aaagattaaa taatcagcat ttacccgccg tatcctggag
     6961 ttgtttcgtg tcagatcaga ttatcgcccg cgtctcgcaa tcccttgcca aagaacagtc
     7021 actggaaagt ctggtccgac agcttctgga gatgctggaa atggtcactg atatggaatc
     7081 aacctacctg accaaagtgg atgtcgaagc gcgcctgcag catattatgt ttgcccgtaa
     7141 cagccagaaa atgcacatcc cggagaattt taccgtctcg tgggattact cgttatgcaa
     7201 acgcgctatt gatgaaaact gctttttcag cgatgaagtc cctgaccgtt ggggcgactg
     7261 tattgcggca cgcaatcttg gaatcaccac atttctgagt acaccaattc acttaccgga
     7321 tggatcattc tatggcacgc tttgcgccgc cagcagtgag aagcgccagt ggagtgaacg
     7381 cgcggaacag gttttacagt tattcgccgg actgattgca caatatattc aaaaagaggc
     7441 gttggttgaa cagctgcgcg aagccaatgc cgcgctgatt gcgcaatcgt ataccgactc
     7501 gttaaccggg ctaccgaatc ggcgggcgat ttttgaaaat ctgacgacgc tgttttctct
     7561 cgcccggcat cttaaccata agataatgat cgcgtttatc gatctggata acttcaaatt
     7621 aatcaatgac cgttttggtc ataatagtgg cgatctgttt ctcattcagg ttggcgagcg
     7681 ccttaatacg ctccagcaaa atggcgaagt tattggtcgt ctcggcggtg atgagttttt
     7741 ggttgtttca ctaaacaacg agaatgcgga tatttcgtcg ctgcgagaac gtattcaaca
     7801 gcaaatacgt ggagaatatc acttaggtga tgttgatttg tattatcccg gtgccagtct
     7861 tggcatagta gaagtcgatc ctgaaacaac cgatgcagac agtgccctgc atgctgccga
     7921 tattgcgatg tatcaggaga aaaaacacaa acagaaaaca ccttttgtcg cgcatccagc
     7981 gctacattcc tgaggcgtat tcacatcctt ttgattggtg ataacatgcg aatcggtatt
     8041 atttttccgg ttgtaatctt tattacagcg gtcgtatttt tagcatggtt ttttattggc
     8101 ggctatgctg ccccgggagc ataaagatga aaaaaacaac gattattatg atgggtgtgg
     8161 cgattattgt cgttctcggc actgagctgg gatggtggta acgtcacctc taaaaaatag
     8221 caaaggctgc ctgtgtgcag cctttgtgca atttaagcgt taacttttaa tcttcctgta
     8281 gataaatagc acgacaatcg caccaataac ggcaaccacg aagctgccaa aattgaagcc
     8341 atcgacttta ccaaagccaa acagtgtgct gatccatccg ccgactacgg caccgactat
     8401 ccccagcaga atagtcataa agaatccacc accatcttta cctggcatga tccacttcgc
     8461 cagaataccg gcaataagcc caaaaataat ccatgacaga atgcccattg tttcctcact
     8521 tatctgtttt gcattagcgg gttagtcgct gataaaaagc atagcacaac atcgggaggg
     8581 caagatttgt gacgagcatc acggaggatt tttttgcgat ggcgcagaaa ttgcgccatc
     8641 aacgatcggt gataattacc aaccacaaac atcatgttcg ttttccgtgt cttgacatcc
     8701 tccacgccct gaatgacgag gatccctgct acgttcaggc tgtcgcctga atcatttcgg
     8761 tgggttcctg cttcaacgag cggcctgact gcaccatctc tccacaggca agaacggcgt
     8821 gccccgccgc taaaatgtta cgagcgccgt ttacatcggc gttcgctgta tatccacata
     8881 cctggcatct gaattgactt tgtgacaggc gattttcttt cgctgtatga ccacagcacg
     8941 cgcaacgctg gcttgtgtac gctggcggaa cagcaagcac ctgaccgcca cgccagagct
     9001 gcttgtactc aagctggcgg cgcatttcat accagccctg atccagtatc gaacggttta
     9061 aacctgattt tgcccggaca ttgcgccccg gctggctgac cgtacccgct gctgactttg
     9121 acatgttgct gaccttcaaa tcctcaatga ctatcattgc gtggtttttg ctgacggtcg
     9181 ttgtgacttt atgaaggtag tccctgcgga tatttgcgat acgggaatgc agtcgctgta
     9241 ttttgcgttt ctgcttctgc cagttattgc tgaatttgac cttgcggctt aactgtcgct
     9301 gaagtctcgc cagcgtcttc tggtttttct gaaaactgtt tacaggccca aagactgtgc
     9361 catctgacag cgtggcgagt ttagccacgc cagcatccag cccgatcatt gatgctgaag
     9421 ggtgaaccgg agttgatact tcactttctg tctgaatact gatgtaccac ttaccgcagg
     9481 actggctgac cgtgacattt ttcacaacac ccgtgacctg acggctattc cggtagcgca
     9541 tccagcccag tttcggcaga aaaatacggc tgttttcctg atcgagcttt acgccctgcg
     9601 ggtagcggaa tgcatcattc tgtccccgct ttttgaatcg gggaaaagca gcccgcttcc
     9661 ggaagaagtt tttgtaagcc cgctcaaggt ctttcagtga ctgttgcaat ggctgtgagg
     9721 gcgaatcttt aagccattgc gtttcagtgg catttttcca ctcaaccagc caggaagcca
     9781 ttttcccgta agggatgtat ttattaccgg cctcatgatt ctcattctga cgtgccagag
     9841 cacgattgaa aacgaaacga catgcgcctg cgaagcgcct catttcacgc tcctgttgac
     9901 caccgggtct taactggaat ttaaatgctt gtagtcgttt cacaggccaa atgatacttt
     9961 ggtctgtgaa aaaagaaacc gatatccggc gtggaaggca ttgtgttttc ctgaagcatg
    10021 ttcacctggt ctttgtcacc agataccgac gtcagatttt tgaccatgac gcgacagaaa
    10081 aactacgcac ttacttttca aatgtatgtg cttattttga agctgaactg gttgaaatgg
    10141 atggcgaacc agatcacgtc catttgttaa ttaactatcc tcccaaactg gcgatatcca
    10201 gtctggtaaa cagcctcaaa ggcgtatcgg gtaggtgact gcgacgagat cgaccagata
    10261 ttgcagtcag gtattactac aaaggcgttt tgtggagtgc tggctatttt gccagtagct
    10321 gcggaggtgc gccaatatcc gtcatccgcc aatacattga acaacagcaa acacctggtc
    10381 aggtggaaaa ccgcgcctta tatccccgcc ctgaaggacg gggttttacg gcgcaccgga
    10441 taagaacgca cggtattcac cagatctttt atcacttcag ccgccacttc tggcaccagc
    10501 aaagtcatcg gcgtctctgt ttcataatcg acagaaacgc cattgctgtt attggtgacg
    10561 gtcacggtat acgttgcttt gcccatgatt catttcccgt tatgaatgac tttccgttgt
    10621 tgcgcacctt ccatcaggac ttcaggagcc acgaagaagt caatgttgaa ataagtatcg
    10681 tcagtcatgg cttcaatgtt gtgccacttt tctggaggga acaccgcaaa ctgccccgct
    10741 tcgataagga tcacctgatc aggctctgca ctgtgttcat cagcgtagcc gagatatttg
    10801 accgccccat gcataacgga aaggcgtggg taaacccccg ggcgcgttcc tttatcaaga
    10861 tgacgttcga atattccggc aggcgcagtt tgtttattcc agaaaggcgt tgagcgcgta
    10921 tgaatataat tctgtgggat ttgcagcatc ctattccctc cttcggggaa tgcgctgaaa
    10981 acggtttatt ccagccgttt cagggtacgc ctgataattt gcattttaaa taccatttat
    11041 tggttacttt ttagcaccat atcagagaaa aatcagggag gattacaagt gggaagcccg
    11101 cgacaacgcg ggctgaatgt atcaggattg cagcgtcgcc agtcgggcgg cgaaacccac
    11161 gaacatcaaa ccaatcagtg agttgccaac tttagccagt ttctttttgg tacgtatgta
    11221 ctgcgtgaca aaagcaccag aaataatcag gaagctcaaa tagcagaaac tcaccagttc
    11281 cagcgtcgtc gccagaataa agaatgaaat tcccgtatgt ggggcattaa catcgataaa
    11341 ctgtacgaaa aacgacacat agaacaaaat ggctttcgga ttagtcaggc tcaaaattaa
    11401 cgcgcgttta aaaatggccc cgtattgggg ctcatcggat ttggcctcgt tatttttacc
    11461 cttcagggtc gcgtagagaa ttttactccc cagatagagc aaataaaacg caccaagata
    11521 acgtacaatg ttgaataata tcggggtggt cttaattaat gtcgccactc cagcccatgc
    11581 cagaaacatc aatactgcat cgccaataaa tacaccgcag gccgcaagat aaccgccttt
    11641 cataccgcta ctgacgctat ttttgagtac aaacagggta tttggccctg gcaccaacac
    11701 aataaaaatg gccccaacca gataggtcca gtaattcaga accccgtatt cagcgaacac
    11761 attaacctct ttaattatct ttcgatcatg cgcgattaaa ggtgaatatg ctaaccaatc
    11821 tgtagcggct tagaaaggag aaaatcaggt tttaacccga tatcaacccg ataattgaat
    11881 cattaatcag gcatgctcca gtgaaaaatt cgggtagtgc tcggcaaaat actggcgtaa
    11941 aaattctacc gttatccgca ctttcgctga cgtcgccagc cttgaaacat aaacggccca
    12001 gacgttcgct ggctggtaat attccggtag cacttgcact aaatgaccac tggcaatgtt
    12061 ttcgctaaca tcccaccagg agcgcagagc aatcccctgc ccatcgagac accactgatg
    12121 gacaatttct ccatgattag acgacagtgg gccggtgact ttaatcgcat ggtggccttc
    12181 tttattgcgt aattgccaga caccaaaagg atgatcgcgc tctttaatga ccaggcacgg
    12241 caatgcggaa agatcggtta aatgtttcgg cgcgccatgt tgcgcaataa attccggcga
    12301 cgcgcagaga atgcggtaat tagtcgccag tttgcgggcg attaaattag gggcgatgtc
    12361 atcgccaatg cgaatatcga gatcaacacc ttcattgacc aaatcgacca accggtcttc
    12421 cacatcaaaa cgtaattcca gttgcggata cgccttagcc agcgctgata acgccggagc
    12481 caccacctgt cgtccaaaac caaagctgct gataatacgc agcatcccct gcggcacctg
    12541 acgcacgtca gaaagttcgt ccatcatctg accgacatcc tgcaaaatcc gctgcgccca
    12601 ttcataaatc cgctctcctt cttcggtaat ggtgacgcgg cgggtggtgc ggtgtaacaa
    12661 caccacgttt agcgtttgct ccagcaaggc gatgcgcttg ctgacgaacg ccggtgaaac
    12721 gcccagttct tccgccacgg cggcaaaacc agcccgacga gccaccagca taaagacgcg
    12781 caaatcattc agcagcggta aattattcat gattcgtgtt ttatgtttca ccagttacgg
    12841 ggattaattc cttttcagtc aattatagga tggtgatgtt gtcaattttg atggtcagga
    12901 agtgagaacc caatgatgaa aacgatgcgt attgctgcga tcccgggaga cgggattggc
    12961 aaagaagtcc ttcctgaagg gattcgcgtg ttacaggctg ccgctgagcg ctggggcttc
    13021 gccttgagtt ttgagcaaat ggagtgggcg agctgcgagt attacagcca tcacggtaaa
    13081 atgatgccgg acgactggca tgagcaactt agccgtttcg acgccatcta ttttggtgcc
    13141 gtcggctggc cggacaccgt tcctgaccat atttcgttgt ggggttcgct gctgaaattt
    13201 cgtcgtgaat tcgaccagta cgtcaacctg cgcccggttc gtctctttcc tggcgttccc
    13261 tgcccgctgg cgggaaaaca gccaggcgac atcgattttt acgtggtcag ggaaaacacc
    13321 gaaggcgaat attcctcgct cggcggtaga gtgaatgaag gtacagagca tgaagtcgtc
    13381 attcaggaat cggtatttac gcgtcgtggt gtcgatcgca ttttgcgtta tgccttcgaa
    13441 cttgcgcaaa gccgcccacg taagacgcta acttctgcca ctaaatcaaa cggtttagcc
    13501 atcagcatgc cgtactggga tgagcgagtg gaagcaatgg ccgagaatta cccggagatc
    13561 cgctgggaca agcagcatat tgatattctc tgcgcgcgtt ttgtgatgca gccggaacgc
    13621 ttcgatgtgg tggtggcgtc caatttattt ggcgatatcc tttccgatct tggcccggcc
    13681 tgcaccggca ccattggcat tgccccatcc gccaacctga atccggaacg cactttcccg
    13741 tcgctcttcg agccagtcca cggttccgcg ccggatatct acgggaaaaa cattgctaac
    13801 cctatcgcca cgatttgggc cggtgcaatg atgctcgatt ttctcggcaa tggcgatgag
    13861 cgtttccagc aagcgcataa cggtattctg gcagcaattg aagaagtgat tgctcacggg
    13921 ccgaaaacac ctgatatgaa aggcaatgcc accacgccac aggttgccga cgcgatttgc
    13981 aaaattattt tgcgttaagg tcaaaccagt ttatttgaac cgcgtcactg acgcggtttt
    14041 tttattcgtt ctttgcagta aataacctgc gtcatttcac cttttattgt ttccgtttcg
    14101 tgttttatgg ctttccgtat tcttaattgt ttaatttatg taacatgcaa ataatcaatt
    14161 tgttaaacac aacatacaac tcattaccct gcaaataatt acaactggca aaagccagag
    14221 acgggctttt atgcccagga gatgactcat gatgagcaat gttaagaaaa aagatgtgcc
    14281 gctgataagc atcagcctgg tggccattct tttcatcgca gctgcattaa gccttttccc
    14341 acaacaatcg gccgacgcgg ccaacgcaat atacactttt gttacgcgta cgttaggttc
    14401 cgccgtacag gtattggttt tgctggcaat gggactggtg atttatttag ccaccagtaa
    14461 atacggcaat attcgtcttg gcgaaggaaa accggaatac agcacgctct cctggctgtt
    14521 tatgtttatt tgtgccggtt taggttcttc tacgctttat tggggggttg ctgaatgggc
    14581 ctattattat caaacgcctg gattaaatat cgcaccgcgt tcacaacagg cactcgaatt
    14641 tagcgtccct tactccttct tccactgggg catcagcgcc tgggcaactt atacgctggc
    14701 ctcattaatc atggcttatc actttcatgt gcgtaaaaac aaaggtctga gtctttccgg
    14761 cattattgcc gcgattaccg gcgttcgccc gcaaggccca tggggaaaac tggttgattt
    14821 gatgttcctg atcgccactg tcggcgcact gactatttcc cttgttgtca ccgcagcaac
    14881 ctttactcgt ggactttccg cgctgaccgg tttacccgat aacttcaccg tgcaggcatt
    14941 tgtgatcctg ctttccggcg gcattttttg cctaagctcg tggattggta tcaacaacgg
    15001 tttgcaacgt ctgagcaaaa tggttggctg gggcgcgttc ctgctgccat tactggtgct
    15061 gattgtcggc ccaaccgaat ttattaccaa cagcatcatc aatgccatcg gtctgaccac
    15121 gcaaaacttc ctgcaaatga gcttattcac cgatccgctt ggcgatggtt catttacccg
    15181 caactggacc gttttctact ggctgtggtg gatctcatac acccctggcg tagcaatgtt
    15241 tgtcacccgc gtttcccgcg gtcgtaagat taaagaagtt atctggggac tgatcctcgg
    15301 cagcaccgtc ggttgctggt tcttcttcgg cgtaatggaa agctatgcca ttcatcagtt
    15361 tatcaatggc gtaatcaacg tcccacaggt gctggaaaca ctgggcggcg aaacagctgt
    15421 acagcaagtt ctgatgtcgt tgccagccgg taaattgttc ctcgccgcat acctgggcgt
    15481 gatgattatt ttccttgcct cgcatatgga tgcggtggcc tacaccatgg ctgcgaccag
    15541 tacgcgtaat ctccaggaag gtgacgatcc tgaccgtggg ctgcgtcttt tctggtgcgt
    15601 ggtgatcact ctgatcccgc tttccatctt gtttaccggt gcttcgctgg aaacgatgaa
    15661 aaccaccgtc gtgctcacag cccttccctt cctcgtcatt ttactggtga aagtcggcgg
    15721 atttattcgc tggctgaaac aggattacgc cgacattccg gctcatcaag ttgaacatta
    15781 tctcccgcag acaccggttg aagccctgga aaaaacgcca gtgctccctg cgggaaccgt
    15841 attcaaaggc gacaactgag cgccatcatc ctaacgataa aggtatccct atgagcaatc
    15901 tgagccctga ctttgtacta cccgaaaatt tttgcgctaa cccgcaagag gcgtggacca
    15961 ttcctgcccg tttttatacc gatcagaacg cgtttgaaca cgaaaaagag aacgtcttcg
    16021 ccaaaagctg gatttgcgtc gctcacagca gcgaactggc gaatgccaat gattatgtga
    16081 cgcgtgagat cattggcgaa agcatcgtgc tggtacgcgg tcgtgataag gttttgcgcg
    16141 cgttctataa cgtgtgtccg caccgtggtc atcagttgtt gagcggtgaa ggaaaagcaa
    16201 aaaatgtgat tacctgcccg tatcacgcat gggcattcaa actcgatggc aatctggccc
    16261 atgcacgtaa ctgcgaaaac gtcgccaatt tcgatagcga caaagcgcaa ctggttccgg
    16321 tgcgtctgga agaatatgcc ggattcgtct tcatcaacat ggaccccaac gccaccagcg
    16381 tagaagatca gttacccggt ctgggcgcga aagtgctgga agcctgcccg gaagtccacg
    16441 atctgaaact ggcggcccgc tttaccaccc gcacgcctgc caactggaag aacattgtcg
    16501 ataactatct cgagtgctat cactgtggtc cggcgcatcc aggtttctcc gactccgtac
    16561 aggttgatcg ttactggcac accatgcacg gtaactggac gctgcaatac ggtttcgcca
    16621 aaccgtccga acagtcgttt aaatttgaag agggtacgga tgcggcattc cacggtttct
    16681 ggctgtggcc gtgcacgatg ctgaacgtca ccccgatcaa agggatgatg acggtcattt
    16741 atgaattccc ggtggattct gaaactaccc tgcaaaacta cgatatttac ttcaccaatg
    16801 aagagttaac cgacgagcaa aaatcgctga ttgagtggta tcgcgatgtg ttccgtccgg
    16861 aagatttacg tctggttgaa agcgtacaga aagggctgaa atcgcgtggc tatcgtggtc
    16921 aggggcgcat catggccgac agtagcggta gtggcatttc cgaacatggt atcgcccatt
    16981 tccataatct gctggcgcag gtgtttaagg actaatgaca tcggcggcgg tattttccgc
    17041 cgctgggctg atttttgatg gagtacagca atgtcagact atcaaatgtt tgaagtacag
    17101 gtgagtcagg tggaaccgct taccgaacag gtgaaacgct tcacgctggt ggcaaccgat
    17161 ggcaaaccgc tgcctgcgtt caccggagga agtcacatca ttgtgcagat gagcgatggt
    17221 gataaccagt acagcaatgc gtattcacta ctgagttcgc cgcatgacac ctcttgttat
    17281 cagattgccg ttcggctgga ggaaaactcg cgcggcggtt cccgcttttt gcatcagcag
    17341 gtaaaagtgg gcgatcggtt aacgatttca acgcctaata acctgtttgc gctaattccc
    17401 tcagccagaa agcatctgtt tatcgcgggc ggtattggta tcaccccttt cctgtcgcac
    17461 atggcagagc tgcaacacag cgacgtcgac tggcagctac attactgctc gcgaaatcca
    17521 gaaagttgcg catttcgtga tgagctagtc cagcatccgc aggctgagaa agttcacttg
    17581 catcactcat caaccggaac acgactggaa ttagcgcgat tattggcgga tatcgaacct
    17641 ggcacacacg tttatacctg tggtcccgag gcgctaaatg aagcggtaag aagtgaagct
    17701 gcgcgtctgg acatcgtcgc cgatacgctg cactttgagc aatttgctat cgaagacaaa
    17761 accggcgatg cctttaccct ggtgcttgcc cgttccggaa aagagtttgt ggtgccggaa
    17821 gagatgacta ttttgcaggt tattgaaaat aataaagccg cgaaagtgga atgtttatgt
    17881 cgtgaagggg tatgcggaac ctgcgaaaca gcaatactgg aaggtgaagc tgaccatcgg
    17941 gatcagtatt ttagcgatga agagcgtgcc agccagcaaa gtatgttgat ctgttgttcg
    18001 cgtgcgaagg gtaaacgcct ggtgttggat ttgtagtttg ccaaagccgg atgtggcgct
    18061 gagcgcgccc agtccggctt cggaagattt tactgcggat attcctgcaa taaattgtgt
    18121 aatgcttccg ccatcagctc accacgccag ccggaaatca gctccggcaa attgttctgc
    18181 ggtttcagtt tccagtgcca gttcagcagt tggttgattt gccgacgcga tgccagcaat
    18241 tcggcgctga tcttatgcgt ttcgctcacg tcagtaatca gcgacttaat cgctttaaac
    18301 gctttacgat aacccggcat gtccatcagg ttaagcatcg gctgcggtaa ggcctcttcc
    18361 ggcaatgtct gcgctttttc caccagcgcc agcagcgttt taccgtgaaa gcggatttcg
    18421 ctaccggata aacccaggct gtccagttcg cctaaacttc ccggcatata acgcgctacc
    18481 gaccacaaat gctcttcacg cacgacaaag ttcaccgcca gatcgcgctc tcgcgccttg
    18541 cgcagtcgcc agtcggctaa cagttgcaga caggccagtt ggcgtgtgcg taattgccag
    18601 gcattggtga tatcacgcca ggcatcttcc ggcgcaacga cttcctgacg acgcatttgc
    18661 atcaggcggc attcatccag cgccgcaggt agccagccgg aggcctccgt ttctaccata
    18721 agcttggcgg tgatcggtaa cagataccag acatccgccg ctgcgtattc acactgacgt
    18781 tcggtcagcg gtctggccag ccagtcggtg cgcgattcac tcttgtccag cgtaacgccg
    18841 gaatactctt ccaccatgga agcgaaaccc catgacatcg ggcgtccgca gaaggcagca
    18901 aggatttgcg tgtcaatcaa gggttgtggt aattcgccaa agacattgag gaacacttcc
    18961 agatcttcac tgcctgcatg gagaaatttt gtgatggacg gatcgcgcag gatcgctttc
    19021 agcggtgacc agtcggtgat cccgagagga tcaattagcg ccagatgctc gccatcgaaa
    19081 agttgaatca accccagctg cgggtaataa gtgcgcgtac gaacaaattc agtatccagg
    19141 gctatcgccg gaaaggcacg gacggcttca cacaaagaag ccagcgcatc gtccgtggta
    19201 atcatttggt aattcaaatt gttttctctt tagtgggcgt caaaaaaaac gccggattaa
    19261 ccggcgtctg acgactgact taacactcag gctttattgt ccactttgcc gcgcgcttcg
    19321 tcacgtaatt ctcgtcgcaa aatttttccg acgttagatt tcggtaactc atcacgaaac
    19381 tccaccagct tcggtacttt gtagcccgtg agctgacggc ggcaaaaggt caccagtgac
    19441 tcttcggtaa gcgatggatc ttttttcact acgaagattt tcaccgcttc accactggag
    19501 ccggaaggta cgccaacagc cgcgacttcc tgtacgccag gatgctgcat gacgacatct
    19561 tcaatctcgt tgggatagac gttaaaaccg gaaaccagaa tcatgtcttt tttacgatcg
    19621 acaatgcgca ggaacccttc ttcatccatc accgcgatgt cgccggtgtg taaccagcca
    19681 tttttgatga tctcatctgt agcatccgga cgctgccagt aacccagcat cacctgcggt
    19741 cctttgacac aaagctcacc cggttgaccc ggtggtactt cattatcatc atcatccacc
    19801 agtttggctt ccgtcgacgg caccggcaaa ccgatgctac cactatgata atcaatatca
    19861 tatgggttaa cgctgaccag cggcgcacac tcggtaaggc catagccttc cagcagatac
    19921 tgtcctgtca gtttcaccca acgctctgcc accacttgct gcactggcat ccctccgcct
    19981 gcggaaagat gcagactgga gaaatccagc tgctggaact ctttattgtt cagcaacgca
    20041 ttgaacaagg tgttaacgcc agtgatagcg gtaaacggat atttcgctaa ctcttttacc
    20101 aaccctggaa tatcacgcgg gttagtgata agcaggttct gcccacccag ttcgataaac
    20161 agcaggcagt taatggtcag ggcaaaaatg tgatacagcg gcagtgccgt tactaccagt
    20221 tctttacctg gatgcagcaa cggcccatag gtggcgttga cctgttccag gttcgccagc
    20281 atattgcggt gagtcagcat cgcgcctttc gccacacctg tggtgccgcc ggtgtattgc
    20341 aggaaggcta aatcttccgg caccagttcg ggtttgacgt actgcatccg gtagccgtta
    20401 tgcagtgcgc tacgaaatga aatggcatct ggcagatggt atttcggcac caaacgcttg
    20461 atgtatttaa caacgaaatt gactaccgtg ccttttgccg tagatagctg atcgcccata
    20521 cgggtcagaa ttacgtgctg aacggcggtt ttatcaacca ctttttccag tgtgtgagca
    20581 aagttagaca cgataacaat cgccgatgcg ccgctatcgt taagctgatg ctcaagctca
    20641 cgcggggtat acaacgggtt aacgtttacg acgatcatcc cggcacgcaa aatgccaaac
    20701 agcgccaccg gatattgcaa taaattaggc atcatcaacg caacgcgatc gcctttcttc
    20761 agccccaacc cttgttgcaa ataagcggca aacgcgcgac tgcgttcttc cagcttgcgg
    20821 aaggtcatta cctcccccat attcacaaac gcaggctgat cggcgtagcg cgcgaccgac
    20881 tgctcaaaca tatctaccag agattgataa cggtcagggt tgatctccgt cggaacgtcc
    20941 gcgggataac ggttaagcca aaccttcttc aattcttcac ctctaaaatg cgtgttcgtc
    21001 gtcatcgcaa ccccaaatga tatacatgac gttaacataa tattaactca tcataccagc
    21061 ttgataatta cccaacgaaa aggttgcgaa gcgcgtcact atttattttt atctttaccg
    21121 taagaatgca gaaacagcgg accagccgct gtttcttttt ctttaaaaac aagcaattat
    21181 tcagttacaa ctgtttgtac tctcgcgggg ccgggattat accagcccca tccgccgtag
    21241 ccatagggcc agccacgacc gccataaaac catggatcaa tcggctgagg cggcataatc
    21301 acctgctggg ttaaatgcca acgtttgtaa cccgttactt gcatcaccat aaatttatag
    21361 ggcgtattgc cgattttgcc gtcaaccgca ccagtgattg gcccgactac cgtaaccagt
    21421 tgtccacgga aatccaccgg gtccagaaaa ccgttcacat cggcataaat gcgaccgcga
    21481 gaaggttctc ccagcgtcgg tctggctccg ctgtccagcg gtacggtagc aatttccagg
    21541 cgggttttcc cttgctggtt ttgtaccgca accactttgc caccaaagcg tgcctcctga
    21601 ccaacgtaca gctgcggcgc actcatcacc cgaactaaat cttgttgcgg cgtgggactg
    21661 ctgcctttaa tggcgtccgg cacagtgaca caaccgctca gcattagcgc aaacgtacct
    21721 gccagtatgc ctttgataac attcttatga accgccatga tgcgactcct ttttttctca
    21781 gggcatactc ttaagattca ttctttgccc ggaagtttct tccatgcgac gttgttacgc
    21841 aaataaaccg gctcggcatg ttccaccgcc accgttttac cctcggcaaa tatctgacaa
    21901 gcaatcggca gcatatcttc tgcagcgggc agtaacactt ctccgtcgcg caaaaccagc
    21961 ccgctctctt taccgagatc cggccaggct tgccagcccg tccctaccgt tacccattcg
    22021 ccggaaagct gttgcattcg ttcatgaacg agttcgggtt tgagtacggc ttcggtttct
    22081 tcaccgtgcc agataccgtt ttcatcacgc tgatattcgg cccagtaaac ttcgcccatt
    22141 cgcgcgtcaa tggctgccag cacgcgggtt gcgccgtttt tgcgccacgc cccttgcgcc
    22201 atcgtcatta gcgtggagac gccaatcatc ggtagctctg cgccaagtgc cagcccttgc
    22261 gcaatgccaa taccaatgcg cacgccggta aagctaccgg ggccgcgccc gtaagccaga
    22321 gcgttaatat cagtcaggga agttccgctg gtggtcagga tatcctgcac catcggtaag
    22381 attcgttgag tatgttcacg agggcaaagc tcaaaatgag cgttgacagt accgtcgttc
    22441 cacagggcga cagagcaggc ctctgtcgcg gtatcgatag ccagaattcg catgggtctt
    22501 cgtgcttaga tcaataaaaa ggcgcgcatc ataccatact ccgtaacaaa ttacctggag
    22561 gatggtatcg caaggaaacg aaccgcacgg gcaatgtcac gagtgcgtgg cgcgggcggc
    22621 agactggcga gaaacgtcgc gccgtaagga cgcatcacca gccgattgtc acaaatcacc
    22681 agcacgccac gatcgtcggc gtcgcgaatc agtcgcccta ccccctgttt gagagtaatg
    22741 acggcatctg gtagttgcac ttcatcgaac gggtcgccac cgcgcaaacg acaatcttcc
    22801 atgcgcgctt ttaacagcgg gtcatccggt gaggtaaacg gcaacttgtc gataatcacc
    22861 aatgacaatg tatcgccacg cacgtccacc ccttcccaga aactactggt tgccacaaga
    22921 agcgcgttac cggcgctgac aaattgctgc aacagttgcc ctttgctggt ttccccctgc
    22981 aacaaaacgg gaagcgtcat ggtagcgcgg aactgctcgg ccagatcgcg catcatggcg
    23041 tgcgaggtac aaagcataaa acaacgaccg ttgttagctt cgatgatcgg tcgcagcatt
    23101 gccgctaact ggcgagcaga acctggctgg ttggtttgcg gcagattgcg cggcacacag
    23161 agtaacgcct ggcggctgta atcaaacggg cttggcaata gcaacgactc cgcctgttct
    23221 atcccaagcc gcgaggtgaa atgatgcaga tcgtcgttca ccgacagcgt tgctgaggtg
    23281 aagatccagc taccgggctt ttgcgccatt aactctttga atttatccgc cacgctgagc
    23341 ggcgtgagag ccagagtaaa atggcgcgaa gtgcattcgt accagtagct gtagcccggc
    23401 tgattgatct cttttagccg cttcagccgt gtgcgataca acgtggcgcg ctcaaatgcc
    23461 gcatccagca aggcggaacg ccccagtgac agtttcgcca cgtcataaca aagttccagg
    23521 gtgtcatcga gcagtaaaaa tgcccgctga atttgcggat tagctaacag ctcacgcagg
    23581 ttaccgcgat aacctggctc accgagttgc agacgaaaat cctgcgcact ctgggcaaga
    23641 cgatcagcgc acttttgtaa ctgctgggtg tcttttaatt cggtgcggta ggcgatggtg
    23701 atgtcttttg ccaggtcgag cagttgtcga ctggagagtg actgaccaaa atactggctg
    23761 gcaatgtccg gtagctggtg ggcttcgtcg aagatcatga cgtccgcttc cgggatcaac
    23821 tcgccaaatc cactctcttt aaccaccata tccgccagaa agagatgatg gtttaccacc
    23881 accacatcgg cgtccatcgc ttttttacgt gctttgacca caaagcaatc tttatacatc
    23941 gggcagtcgc tgccaagaca gttgtcgttg gtgctggtga ccagcggcca cgcctgtgaa
    24001 tcttccgcca cgctgacgca ggtgctgata tcaccatcga ctgtttgatt agaccaggag
    24061 cgcagcagga tcacatcgct taagatttgt accggcagat cgccccccgc cagcgcctgc
    24121 tgttcgagac gttcaaggca gaggtagttt gagcgccctt tcagcagcgc cacgttgccc
    24181 gtgtatttca acgcctttga gactgttggc aaatcgcggc tgtagagctg atcctgcaac
    24241 gcttttgagc cggtcgagat aatgactttc tttttcgccc gcagcgcagg agccaggtaa
    24301 gcgtaggttt tgcccgtacc ggttcctgct tccaccacca gcggctggcc tttttctatc
    24361 gcctgggtga cggctaccgc catctgtcgc tgtggttctc gcggcttaaa gcctggtatc
    24421 gctttcgcca gctgaccgtc tggtgcaaaa tcgtccgtca cactaccccc tgttgatttg
    24481 aacagggatt atgtcaggat gaggtcgctt tcgccagttg aagtggtgac ggcgacctca
    24541 cattgtggca gtctttgcag cacgaaaatg gaaggataat gaggacaaaa taatgactat
    24601 cgttcgtatc gatgctgaag cccgctggtc tgatgtagta atccacaaca acacgctcta
    24661 ctacactggt gtaccggaaa acctcgacgc cgatgccttt gagcaaaccg ccaacacgct
    24721 ggcgcagatt gacgccgtgc tggaaaaaca gggcagcaat aaatcgagca ttctggatgc
    24781 caccattttc ctggccgata aaaacgactt cgcggcgatg aataaagcgt gggatgcctg
    24841 ggttgtcgcg ggtcatgcgc cggtgcgctg cacggtacaa gcgggtttga tgaacccgaa
    24901 gtataaagtt gaaattaaga ttgtggctgc ggtgtaagct ttatcgaagc aaaataagtc
    24961 agacgataat ttatcgataa tactggtcgg ttttacataa atcgaccaga gattaagata
    25021 ttacctgttg atgctcctgc taattcatta t
//
LOCUS       DAPGWB010000062        24790 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.062, whole genome shotgun sequence.
ACCESSION   DAPGWB010000062 DAPGWB010000000
VERSION     DAPGWB010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 24790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24790
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.062"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            162..1598
                     /gene="mdtQ"
                     /locus_tag="RHX79_002404"
     CDS             162..1598
                     /gene="mdtQ"
                     /locus_tag="RHX79_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001583680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug resistance outer membrane protein
                     MdtQ"
                     /protein_id="HDV2197561.1"
                     /translation="MNRDSFYPAIACFPLLLMLAGCAPMHETRQALSQQTPAAQVDTA
                     LPTALKNGWPDSQWWLEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQD
                     GPQIDFSADMERQKMSAEGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNR
                     AEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIAT
                     DRQLYQNGITSSVEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKP
                     VALPKVASQLPDELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQ
                     DALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAV
                     NDVARAASQVQTLAEKNQHQAQIERDALRVVGLAQARFNAGIIAGSRVSEARIPALRE
                     RANGLLLQGQWLDASIQLTGALGGGYKR"
     gene            1651..2412
                     /locus_tag="RHX79_002405"
     CDS             1651..2412
                     /locus_tag="RHX79_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDV2197562.1"
                     /translation="MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTA
                     REVVSHGVRAEIVQLDLGKLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFD
                     EWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHAL
                     GGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATYEIA
                     SLVAWLCSEGANYTTGQSLIVDGGFMLANPQFNPE"
     gene            complement(2542..3120)
                     /locus_tag="RHX79_002406"
     CDS             complement(2542..3120)
                     /locus_tag="RHX79_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416640.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV2197563.1"
                     /translation="MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLV
                     VLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFM
                     YGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL
                     KHWVWLILVVVLVVGVRWWLKRRGKKKPDNQA"
     gene            3290..3877
                     /locus_tag="RHX79_002407"
     CDS             3290..3877
                     /locus_tag="RHX79_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014170891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HDV2197564.1"
                     /translation="MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICA
                     FIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPS
                     LAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKE
                     EGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF"
     gene            4051..4983
                     /gene="pbpG"
                     /locus_tag="RHX79_002408"
     CDS             4051..4983
                     /gene="pbpG"
                     /locus_tag="RHX79_002408"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311048.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine endopeptidase"
                     /protein_id="HDV2197565.1"
                     /translation="MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAM
                     IVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVY
                     SRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTR
                     FVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNH
                     LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW
                     IETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND"
     gene            complement(5021..6736)
                     /gene="dld"
                     /locus_tag="RHX79_002409"
     CDS             complement(5021..6736)
                     /gene="dld"
                     /locus_tag="RHX79_002409"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDV2197566.1"
                     /translation="MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQG
                     DALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTL
                     RLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG
                     GSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRH
                     DGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQ
                     QVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGT
                     DKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHL
                     LLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSD
                     EVEDILALDIALRRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVH
                     ALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKN
                     WQEVE"
     gene            6932..9229
                     /gene="bglX"
                     /locus_tag="RHX79_002410"
     CDS             6932..9229
                     /gene="bglX"
                     /locus_tag="RHX79_002410"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase BglX"
                     /protein_id="HDV2197567.1"
                     /translation="MKWLCSVGIAVSLALQPALADDLFGNHPLTPEARDAFVTELLKK
                     MTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRL
                     KIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD
                     VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEG
                     GKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRD
                     QWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKS
                     GKVTMEELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVAR
                     ESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNSV
                     GENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDVVVAV
                     VGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADA
                     ILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKP
                     NKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKRE
                     GATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYD
                     AEPGKFNVFIGTDSARVKKGEFELL"
     gene            9440..10357
                     /gene="osmF"
                     /locus_tag="RHX79_002411"
     CDS             9440..10357
                     /gene="osmF"
                     /locus_tag="RHX79_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein OsmF"
                     /protein_id="HDV2197568.1"
                     /translation="MPLLKLWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNII
                     LQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQ
                     QGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEGGTF
                     KLAASAEFIERADALPAFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMA
                     YGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTL
                     QQLNASIAVEGLDAKKVAADYLKQKGWTK"
     gene            10364..11521
                     /gene="yehY"
                     /locus_tag="RHX79_002412"
     CDS             10364..11521
                     /gene="yehY"
                     /locus_tag="RHX79_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehY"
                     /protein_id="HDV2197569.1"
                     /translation="MTYFRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQL
                     WPQTIWMLVGVGCAWLTACFIPGKKGSICALILAQFVFVLLVWGAGKAATQLAQNGSA
                     LARTSLGSGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDL
                     SLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNV
                     IQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVV
                     GLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIG
                     AGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALLKVKRND"
     gene            11514..12440
                     /gene="yehX"
                     /locus_tag="RHX79_002413"
     CDS             11514..12440
                     /gene="yehX"
                     /locus_tag="RHX79_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter ATP binding
                     protein YehX"
                     /protein_id="HDV2197570.1"
                     /translation="MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTL
                     KMINRLVEHDSGVIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQL
                     QKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE
                     PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGN
                     PLTMLTRPANDFVRQFFGRSELGVRLLSLRSVADYVRREERAEGEALAEEMTLRDALS
                     LFVARGCEVLPVVNTQGQPCGTLHFQDLLEEA"
     gene            12445..13176
                     /gene="yehW"
                     /locus_tag="RHX79_002414"
     CDS             12445..13176
                     /gene="yehW"
                     /locus_tag="RHX79_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehW"
                     /protein_id="HDV2197571.1"
                     /translation="MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQE
                     SFAALALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAV
                     LAIAVPVIGFGLQPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRSQRLR
                     KVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGAL
                     LVALAAIIADRLFERLVQALSQHAK"
     gene            complement(13157..13264)
                     /locus_tag="RHX79_002415"
     CDS             complement(13157..13264)
                     /locus_tag="RHX79_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohO"
                     /protein_id="HDV2197572.1"
                     /translation="MRIAKIGVIALFLFMAFGGIGGVMLAGYTFILRAG"
     gene            complement(13324..14055)
                     /gene="mlrA"
                     /locus_tag="RHX79_002416"
     CDS             complement(13324..14055)
                     /gene="mlrA"
                     /locus_tag="RHX79_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MlrA"
                     /protein_id="HDV2197573.1"
                     /translation="MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFND
                     ADIDRIREIKRWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRT
                     WIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKK
                     QGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGE
                     NRTSAQQQQLTSWQEQGHDIFPLGI"
     gene            14277..15962
                     /gene="btsS"
                     /locus_tag="RHX79_002417"
     CDS             14277..15962
                     /gene="btsS"
                     /locus_tag="RHX79_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulatory system sensor histidine
                     kinase BtsS"
                     /protein_id="HDV2197574.1"
                     /translation="MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKF
                     LCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSM
                     GGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILA
                     IARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAAS
                     TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISST
                     YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR
                     LFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIK
                     AVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV
                     NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNA
                     GLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA"
     gene            15959..16678
                     /gene="yehT"
                     /locus_tag="RHX79_002418"
     CDS             15959..16678
                     /gene="yehT"
                     /locus_tag="RHX79_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310963.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BtsR"
                     /protein_id="HDV2197575.1"
                     /translation="MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVH
                     KLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP
                     IDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM
                     SGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR
                     NGLTVPVSRRYLKSLKEAIGL"
     gene            16725..17195
                     /locus_tag="RHX79_002419"
     CDS             16725..17195
                     /locus_tag="RHX79_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1456 family protein"
                     /protein_id="HDV2197576.1"
                     /translation="MISNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKE
                     DEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTD
                     DILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS"
     gene            complement(17236..17697)
                     /locus_tag="RHX79_002420"
     CDS             complement(17236..17697)
                     /locus_tag="RHX79_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416627.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HDV2197577.1"
                     /translation="MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAIT
                     YVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYA
                     QENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK"
     gene            complement(17822..19822)
                     /locus_tag="RHX79_002421"
     CDS             complement(17822..19822)
                     /locus_tag="RHX79_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HDV2197578.1"
                     /translation="MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEN
                     SALIATFSDGVRTQLANSQALKEAQCSCGASGMCRHRVMLVLSYQRLCATVQPTEKEE
                     EWDPAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSS
                     IRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEG
                     QTCRQYVQQLSQALWLGGISQPLIHYEAAFNRALQAAEACNWRWVSESLRQLRASVDA
                     FHTRASHYHAGECLRQLAALNSRLNCAQEMARRDSVGEVPPVPWRTVVGSGIAGEAKL
                     DHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSF
                     QAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALR
                     EYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNLLTLSL
                     PASACSPFAVERMAALLQQTDDPVSLVSGFVSFVDGQLTLEPRVMMTKTRAWALDAET
                     APVAPLPSASVLPVPSTAHQLLMRCQALLIQLLHNGWRYQEQSAISQAELLANDLSAV
                     GFYRLAHVLGQFRNTESEARVEAMNNGVLLCEQLFPMLQQQG"
     gene            complement(19819..20955)
                     /locus_tag="RHX79_002422"
     CDS             complement(19819..20955)
                     /locus_tag="RHX79_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HDV2197579.1"
                     /translation="MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEW
                     LYGRDPERLQRGERSGGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVV
                     TNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARQIVRQVVEEIMARLAKEVRQAFS
                     GVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLV
                     LLVDQSGSMVDSVIHSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQ
                     LGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSCIKVLGL
                     AALDSTATPCYDHDTAQALVNVGAQIAAMTPGELASWLAENLQS"
     gene            complement(20948..23227)
                     /locus_tag="RHX79_002423"
     CDS             complement(20948..23227)
                     /locus_tag="RHX79_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197580.1"
                     /translation="MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRV
                     DELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDL
                     PCWAQSEEEDDSPDTQDESQALLLRATRMDNSDTLWDHLFEDESQQTALPSALAHYFA
                     QLRGDFPGDALNRQREAFMARWIAWAVQQNNGDVLVVCGGWHAPALAKMWRECPQDIN
                     TPELPSLADAITGCYLTPYSEKRLDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKT
                     VLTRLRQHNLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPL
                     PWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAE
                     LTLNRFTPDGLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEEHWKLTRPLSQHAAL
                     IEAACFGATLQEAARHKLEADMLDAGGIGSITTCLSQAALAGLASFSQQLLEQLTLLI
                     AQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCAAIDRTLWLCESNGRPDEK
                     EFHAHLHSWQALCHILRDLHSGVQLPGISLSAAVALLERRSQAIHAPALDRGAAHGAL
                     MRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALARHQLACQPTFIAGFSSHLNQLS
                     DADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQLPVSALQMPLHCPPQAIAHH
                     QQLEQQALASLQNWGVFHV"
     gene            complement(23238..24326)
                     /locus_tag="RHX79_002424"
     CDS             complement(23238..24326)
                     /locus_tag="RHX79_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310954.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HDV2197581.1"
                     /translation="MSPQNNHLQRPPAAVLYADELAKLKQNDNAPCPPGWQLSLPAAR
                     AFILGDSAQNISRKVVISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISG
                     DAGLTIQGGASTTEDQIKYGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITR
                     TPLEVQDCLLGMLSDRVMTVPELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKR
                     RFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEK
                     KTSMDTLTAIMSTAEAVNVAHAVGVRAWFLANRAGEPADLVDCIAGTIVKDNEEDRAR
                     LRRYFEQRVATHKEAHWQAYYQARHRLP"
BASE COUNT         5770 a         6331 c         6782 g         5907 t
ORIGIN      
        1 tccataaacg attaagataa atcggaagat atcatttact tagtctatat ttttctggat
       61 atgtcgtttt attgctactg atgtattgcc acgcgaaact aaaaaatata tcgcaacaca
      121 cggtaatctc cgcgcacctt ttcttacctg attattcccc catgaatcgt gattcctttt
      181 atcccgccat cgcctgtttt ccgctgttac tgatgctggc cgggtgtgcg cctatgcatg
      241 aaacccgcca ggcattaagc cagcaaacgc ccgctgcaca agttgacacc gcattaccca
      301 cggcgctgaa aaatggttgg ccagacagcc aatggtggct ggagtatcac gataatcaac
      361 tcacttcctt aattaacaat gcactacaga acgcaccgga tatgcaggtg gctgaacagc
      421 gcattcagct agctgaagcc caggcgaagg caattgctac tcaggatggt ccgcagatcg
      481 acttttctgc ggatatggag cggcaaaaaa tgtcggcaga aggcttaatg gggccgtttg
      541 ctctgaacga tccggccgca ggtacgaccg gtccgtggta caccaacgga acttttggct
      601 taacggcggg ctggcatctc gatatctggg gaaagaatcg ggcggaggtt actgcccgcc
      661 tgggtacggt taaagcacgg gcggcggaac gcgagcaaac ccgccaattg ctggctggca
      721 gcgtagcccg cctgtactgg gagtggcaaa cccaggcggc gttaaacacg gtcttgcagc
      781 aaatagaaaa agagcagaac accattatcg cgaccgatcg ccagctatat cagaacggga
      841 ttacttcttc agttgaaggt gtggaaaccg atattaatgc cagcaaaacc cggcagcagc
      901 tcaacgatgt cgcggggaaa atgaaaatta ttgaggcacg gttaagcgca cttacaaata
      961 accagacaaa gtcattgaag cttaaaccgg tcgcgttgcc gaaagtggca agccagcttc
     1021 ctgatgaact ggggtactcc ttactggccc ggcgggcaga tttgcaggcg gcgcactggt
     1081 acgttgagtc atcgctaagc accattgatg cggcaaaagc ggcattttat cctgacatca
     1141 acctgatggc cttcctgcaa caggatgcgt tgcacttaag cgatctgttc cgtcattccg
     1201 cgcagcaaat gggcgttacg gcaggcctga cgctacccat tttcgatagt ggtcgtctta
     1261 acgccaatct cgatatcgca aaagccgaaa gcaacttgtc tatcgccagc tacaacaaag
     1321 cggtggttga agcggtgaat gacgtggcgc gggcagccag tcaggttcag acacttgcgg
     1381 agaaaaacca gcatcaggcg caaattgagc gcgatgcctt gcgtgtggta ggtcttgcgc
     1441 aggcgcgctt taacgcgggc atcattgctg gttcccgcgt cagcgaagcc agaatccccg
     1501 cgctgcgtga gcgggccaat ggcctgttat tgcaagggca gtggctggat gcttccattc
     1561 aactcactgg tgcgttgggc gggggttaca aacgctgatg atatgcgcct tctatactta
     1621 acgtttattc agcgttaagt ggagaactcg atggcacagg ttgcgattat taccgcctcc
     1681 gattcgggga tcggcaaaga gtgcgcgtta ttactggcgc agcaggggtt tgatattggc
     1741 attacctggc actcagatga agaaggggca aaagataccg cgcgtgaggt agttagccac
     1801 ggcgtacgtg cggagattgt gcagctggat ctcggtaaac tgccagaagg tgcacaggcg
     1861 ctggagaaac tcattcaacg gctggggcgt attgatgtgc tggtgaataa tgcgggcgca
     1921 atgaccaaag cgccgtttct tgatatggct ttcgatgagt ggcgcaagat ttttaccgtt
     1981 gatgtcgatg gtgcattttt atgctcacaa attgcggccc gccagatggt gaaacaaggg
     2041 cagggtggtc gcatcatcaa cattacgtcg gtacatgaac atacgccgct gccggatgcc
     2101 agcgcctaca cagccgctaa acatgcgctc ggcgggttaa ccaaagcaat ggcgctggag
     2161 ttggtcaggc ataagatttt ggtgaacgca gtcgcacctg gggcgatcgc tacgccaatg
     2221 aacggcatgg atgatagcga cgtgaagccc gacgcggagc cttcgattcc tctgcggcgt
     2281 tttggcgcaa cgtatgagat tgccagcctg gtggcgtggc tttgttcgga gggcgcaaat
     2341 tacaccaccg ggcagtcgtt gatagtggat ggcggcttta tgttggcgaa tccgcagttc
     2401 aacccagaat agcgcagtga ggtgtgtgga tatttcaatg ggtaaaattt tggtaggcat
     2461 gataagacgc acaagcgccg catcaggcat ggtgcaccgg atgtcggatg cggcgcgaac
     2521 gccttatcca gggcaatggt tttacgcctg attatccggc tttttcttcc cgcgtcgttt
     2581 cagccaccag cgcacgccta ccaccagaac cacgaccaga atcaaccaga cccagtgctt
     2641 caaatgctga tcgagattgt gcaaccacgg cgcaatcacc tgaccaccag cgtaaccgat
     2701 agtggtaaaa atcaacgccc aggcaaatgc gccgagaata ttaagcggca gaaagatttt
     2761 cggcggcagc tggctggcac caatcagcgt cgggccaatc acccgaaagc catacataaa
     2821 gcgcgtacca atgacaaaca gatacggatg gcgttggata agtttctgcg cccgctcaat
     2881 tttatcctga tgtttcgaga aacggcgtaa cagcttgccg ccaaaccgcc gcccgcacag
     2941 ataaagcacc tggtcgccaa tcatgccgcc aagcgccaca gaaagtacca ccagcgggaa
     3001 ctttaatagc ccctgatgcg ccgcaacgcc tcccagcaaa gtcacggttt caccttccgc
     3061 caggctaccg atcaccagcg cggcataacc atattgtgag atgagtgtat tgagatccat
     3121 aggccagtct gtctcccttt ggttgcctgt aagcatacac cctggaaatc attcacgctg
     3181 aaaaaggacg tacatcagac ggtgcaaatt acatgagcga acaaaaaata atcacaagct
     3241 gacttatact tgaactgtca ggttcatgaa ctcacaacaa gggggcggta tgagccatgt
     3301 ctggggactg ttttcccatc ccgatcgtga aatgcaggtg attaatcgcg aaaacgaaac
     3361 gatttctcac cattacaccc accacgtttt gctgatggcg gcgattccgg tgatttgcgc
     3421 cttcattggc actacacaga ttggctggaa ttttggcgat ggcactatcc tgaagttatc
     3481 ctggtttacc ggactggcgc tggctgtcct gttttatggc gttatgctgg ctggggttgc
     3541 ggtaatgggg cgggtcatct ggtggatggc gcgtaattat ccgcagcgtc cgtcacttgc
     3601 gcactgcatg gtcttcgcgg gctacgttgc aactccgctg tttttaagcg gtctggtggc
     3661 gctttatccg ctggtctggt tgtgtgcgct ggtcggcacg gtggcgctgt tttacaccgg
     3721 ctacctgctt taccttggta ttccgagctt cctgaatatc aacaaagagg aaggccttag
     3781 cttctctagt tcgacgctgg cgattggcgt gctggtactg gaagtgctgc tcgccctaac
     3841 cgttatacta tggggctacg ggtatcgcct gttctagaaa gttctttgac gttgcattgc
     3901 tggcgtaaat gtcagcaatg cagcatttcc tcacgattct cctttgacga tcgcactttt
     3961 tgctcgttat gatggcgtcg ctagcctcag taaatcctta ctccggcggt gcgcaacccg
     4021 tgcgcgtgaa ccactatctg aatgctcatc atgccgaaat ttcgagtttc tttatttagc
     4081 ctggccctga tgctggctgt gcctttggca ccgcaggccg ttgcgaaaac ggcagccgct
     4141 accaccgctt cacaaccgga aattgcctcc ggtagcgcga tgattgttga tctgaatacc
     4201 aacaaagtga tctattcgaa ccacccggat ctggtgcgtc cgattgcgtc tatcagcaaa
     4261 ttaatgaccg cgatggttgt gctggatgca cgactgccgc tggatgaaaa actaaaagtg
     4321 gatatcagcc agacgccgga gatgaaaggg gtctattcgc gcgtacgact gaatagcgaa
     4381 atcagccgta aagatatgct gttgctggcg ctgatgtctt cagaaaaccg cgcggcggca
     4441 agccttgcgc accattatcc cggtggttac aaagccttta ttaaggcaat gaatgcgaaa
     4501 gcgaaatcgc tcggaatgaa caacacgcgc tttgttgaac ctaccggatt gtcggtgcat
     4561 aacgtttcaa ctgcccgtga cttaaccaaa ctgctcattg ccagcaaaca atatccgttg
     4621 atcgggcagt taagtactac ccgggaagat atggcaacct tctctaaccc gacgtatacg
     4681 ctgccgttcc gcaatactaa tcatctggtg tatcgcgata actggaatat tcagttaacc
     4741 aaaaccggct ttaccaatgc ggcgggccat tgtctggtga tgcgtacggt tatcaataat
     4801 aaaccggtgg cgctggtagt gatggacgcg tttggcaaat atacccattt tgccgatgcc
     4861 agccgcctgc gtacctggat tgaaaccggt aaagtgatgc ctgtgccggc agcagcgttg
     4921 agctataaaa aacaaaaagc cgcccaaatg gcggcggcgg ggcagacggc acagaacgat
     4981 taagtgaatt cggatggcga tactctgcca tccgtaattt ttactccact tcctgccagt
     5041 ttttccgttt actggtttta ccgattcccg gattcatgct gttggtcgga tcgttctcgc
     5101 gatagaactt ctgcaacgtc tccggtgctt tatacaaatg accgacgtta tgctcggcag
     5161 ggtattgcgc gccgcgctgc tgtagcagtt ccagcatctg ttcttttaac gcatgcacat
     5221 ccacgccttt tttcactatg taatcctgat ggaagacata gcacataaaa tggccgtaat
     5281 agagcttgtg caccagctgg ctgtcgatct ccggcggtaa atgctcatac cactcggtgt
     5341 cgttacgccg cagagcgata tccaacgcca gaatgtcttc gacttcatcg gaatgcaccg
     5401 cctgataacg aattgctgcg cccgcagcgg cgaaacggtg taaaaacgct ttgctgcctt
     5461 cctccggcgt acagacaaag aaatcgcctt cggcctgttt gaaataatcc accaaccacg
     5521 atttggcttc gcccacgcca tcgcccgcca tttttaacag cagatgatgc tcgtatttat
     5581 cgcgccagtt tttcatgcgc ggcggtaaat ggctggggaa caggtgaccg aatttttgca
     5641 tcgcacggtc agtaaaatgc ggacggaaga atttcacttt ctccagcatc gcatcggtgc
     5701 gtcccttgag attaaagaag aacggcatct tgtcggtgcc taacttatca atcatcagga
     5761 aggtgtcttt gccgtatttt tccgcaatat cgtagatatc ccggtgcata tattccccgg
     5821 caaccggcag attttcgaag ttagccagaa tatgacggcg gatttcggtc agcacttccg
     5881 gctggttggt gccgatataa aacacctgct gatttttttc cgcttcgaag gtatctagac
     5941 gtaccgcaaa gacggccagc ttcccggcgc aaccagaaga ttcaaataac cgatccggat
     6001 cggcgttata acgtgcgggc gtgtcggctt caatatcacg aacgcggtgg acatagtcat
     6061 aatcgtgggc gtgacgacca tcgtgacgca catcgtcatc tttgatgcga tcatcatcca
     6121 gcttgctaag gatctgctcc ggcgtttcgc ccagatcaat ccccagatgg ttcaccagcg
     6181 tcagtttgcc gtcttcattt atacgcgcga ataacgacat ttcggtatac gccgggccac
     6241 gttgcaccag cgagccgccg gagttgttac aaataccgcc gataaccgat gcgcctatac
     6301 acgacgatcc aatcaccgag tgcggttcgc gtcccagcgg tttgagggct ttttccagcg
     6361 aatagagcgt ggtgcccgga taggctagca cctgttcgcc cttgccaaga acgtgcagct
     6421 tgtcgagacg cagggtgctg atgataacga catctcgatc atagtcgtta ccgtttggcg
     6481 tcgatccttc ggtcaggcct gtattggcag cctgcatcag aataattttg tcggcggtga
     6541 cgcaggcttt cagcacccgc cacaattcca gtagtgagcc agggaaaacg acagccagcg
     6601 cgtcgccctg accagaacgg aagcccttgc gatagcgggc cgtttttgcg ggatcggtga
     6661 gcaggtgtga atgaccgacc agacgggcaa gttcattcaa aaaggcttta ttatcagttg
     6721 ttgtcatgga agacattttc cactccttgt ggtggcgaaa aaatatcaca aactagaata
     6781 gcgccttgta tgacaattca gcgagtgaat attttgaaaa ttcagacaat aaactgagca
     6841 ttctttttct ctctccatca tgcttatggc aaactacggt ttttgcacca ttttcgctgc
     6901 ctcgtcgggc aacagaggaa gaaaaatcca tatgaaatgg ctatgttcag taggaatcgc
     6961 ggtgagtctg gccctgcagc cagcactggc ggatgattta ttcggcaacc atccattaac
     7021 gcccgaagcg cgggatgcgt tcgtcaccga actgcttaag aaaatgacag ttgatgagaa
     7081 aattggtcag ctgcgcttaa tcagcgtcgg cccggataac ccgaaagagg cgatccgcga
     7141 gatgatcaaa gacggtcagg ttggggcgat tttcaacacc gtaacccgtc aggatatccg
     7201 cgccatgcag gatcaggtga tggaattaag ccgcctgaaa attcctcttt tctttgctta
     7261 cgacgtgctg cacggtcagc gcacggtgtt cccgattagc ctcggtctgg cctcgtcttt
     7321 taacctcgat gcagtgaaaa cggtcggacg tgtctctgct tatgaagcgg cagatgatgg
     7381 cctgaatatg acctgggcac cgatggtcga tgtctcgcgc gatccgcgct ggggacgtgc
     7441 ttccgaaggt tttggcgaag atacgtatct cacctcaaca atgggtaaaa ccatggtgga
     7501 agcgatgcag ggtaaaagcc cggcagatcg ctactcggtg atgaccagcg tcaaacactt
     7561 tgccgcatac ggcgcggtag aaggcggtaa agagtacaac accgtcgata tgagtccgca
     7621 gcgcctgttt aatgattata tgccgccgta caaagcgggg ctggacgcag gcagcggcgc
     7681 ggtgatggtg gcgctgaact cgctgaacgg cacgccagcc acctccgatt cctggctgct
     7741 gaaagatgtt ctgcgcgacc agtggggctt taaaggcatc accgtttccg atcacggtgc
     7801 aatcaaagag ctgattaaac atggcacggc ggcagacccg gaagatgcgg tgcgcgtggc
     7861 gctgaaatcc ggaatcaaca tgagtatgag cgacgagtat tactcgaagt atctgcctgg
     7921 gttgatcaaa tccggcaaag tgacgatgga agagctggac gatgctgccc gccatgtact
     7981 gaacgttaaa tatgatatgg gattgtttaa cgacccatac agccatttgg ggccgaaaga
     8041 gtctgacccg gttgacacta atgccgaaag ccgcctgcac cgtaaagaag cgcgtgaagt
     8101 ggcgcgcgaa agcctggtgt tgctgaaaaa ccgtctcgaa acgttaccgc tgaaaaaatc
     8161 ggccaccatt gcggtggttg ggccactggc ggacagtaaa cgtgacgtga tgggcagctg
     8221 gtccgcagcc ggtgttgccg atcaatccgt gaccgtactg actgggatta aaaattccgt
     8281 cggtgaaaac ggtaaagtgc tgtatgccaa aggggcgaac gttaccagtg acaaaggcat
     8341 tatcgatttc ctgaatcagt atgaagaagc ggtcaaagtc gatccgcgtt cgccgcaaga
     8401 gatgattgat gaagcggtgc agacggcgaa acaatctgat gtggtggtgg ctgtagtcgg
     8461 tgaagcacag gggatggcgc acgaagcctc cagccggacc gatatcacta ttccgcaaag
     8521 ccaacgtgac ttgattgcgg cgctgaaagc caccggtaaa ccgctggtgc tggtgctgat
     8581 gaacgggcgt ccgctggcgc tggtgaaaga agatcagcag gctgatgcga ttctggaaac
     8641 ctggtttgcg gggactgaag gcggtaatgc aattgccgat gtattgtttg gcgattacaa
     8701 cccgtccggc aagctgccaa tgtccttccc gcgttctgtc gggcagatcc cggtgtacta
     8761 cagccatctg aataccggtc gcccgtataa tgccgacaag ccgaacaaat acacttcgcg
     8821 ttattttgat gaagctaacg gggcgttgta tccgttcggc tatgggctga gctacaccac
     8881 tttcaccgtc tctgatgtga aactttctgc gccgaccatg aagcgtgacg gcaaagtgac
     8941 tgccagcgtg caggtgacga acaccggtaa gcgcgagggg gccacggtag tgcagatgta
     9001 cttgcaggat gtgacggctt ccatgagtcg ccctgtgaaa cagctgaaag gctttgagaa
     9061 aatcaccctg aaaccgggcg aaactcagac tgtcagcttc ccgatcgata ttgaggcgct
     9121 gaagttctgg aatcaacaga tgaaatatga cgccgagcct ggcaagttca atgtatttat
     9181 cggcactgat tccgcacgcg ttaagaaagg cgagtttgag ttgctgtaat gctttagtaa
     9241 gggcgcgacg tttgcgccct ttgtaggccg gataaggcgc tcgcgccgca tccggcagga
     9301 aacgccggac cgaatatgcc tcttaagtat ttatctgatt ctgcaactga atccttccgc
     9361 tcaagctaac cccgccatta tcaactatgc ttttctctta attcgctgaa aacaacagta
     9421 aaagaatgag gaaagcatca tgccactctt aaagctctgg gcaggttcac tggttatgtt
     9481 ggcagccgtg agcctgccgc tacaggcggc ttcccccgtt aaagtcggtt caaaaatcga
     9541 taccgaaggt gcgctactcg gcaatatcat tttgcaggtg ctggaaagcc acggcgtacc
     9601 gacggtgaat aaagtgcaac tcggaacgac tcctgtggtg cgcggggcga ttacttccgg
     9661 tgaactggat atctatccgg aatataccgg caatggcgct ttcttcttta aagatgaaaa
     9721 cgatgcagcg tggaaaaacg cgcagcaagg ttacgagaaa gtcaaaaagc tcgattcgga
     9781 gcacaacaag ttaatctggc tgacgcccgc gcctgcaaat aacacctgga ctatcgccgt
     9841 gcgtcaggat gtggcagaga aaaataaact cacttcgctt gccgacctga gtcgttatct
     9901 gcaagagggc ggcaccttca aactggcagc ctcggcagag tttatcgaac gcgccgatgc
     9961 gttacccgcg tttgaaaaag cctatggctt taagctcggt caggatcagt tgctgtcact
    10021 ggctggtggc gacacggcgg tgacgatcaa agccgctgcc cagcaaacct ctggcgttaa
    10081 tgctgcaatg gcttacggca ctgacggccc ggtagcggcg ctggggctgc aaaccttaag
    10141 cgatccgcaa ggcgtgcaac ctatctacgc gcctgcacca gtggtgcgtg agtcggtgct
    10201 gaaagagtat ccgcaaatgg cacagtggct acagccagtc ttcgccagcc tcgatgcaaa
    10261 aacattgcag caactgaatg ccagcattgc agtggaagga ctggatgcca aaaaagtggc
    10321 tgccgactac ctgaaacaaa aagggtggac gaagtaattt cccgtgactt atttccgtat
    10381 taatcctgtt ctggcgctgc tgctgttgct gacggcaatc gcagcggcgc tgccgtttat
    10441 cagttacgcg cctaatcgtt tagtttcggg tgaggggcgt catctctggc agctgtggcc
    10501 gcaaacgatc tggatgctgg tgggcgttgg ttgcgcctgg ctgacggcct gttttattcc
    10561 cggtaaaaaa ggcagcattt gtgcactcat tctggcgcaa ttcgtcttcg tattgctggt
    10621 gtggggcgcg ggaaaggcgg cgacacaact ggcgcaaaat ggcagtgcgc tggcgcgtac
    10681 cagcctcggc agtggtttct ggctggctgc ggcgctggca ttgctggcct gtagcgatgc
    10741 catccgccga atctccacgc atccgctgtg gcgctggttg ttgcatatgc agattgccat
    10801 tattccgctg tggttgctgt actccggcac gcttaacgat ctctcactaa tgaaagaata
    10861 cgccaaccgt caggatgtgt ttgacgacgc gctggcacaa catctgacgt tgctgtttgg
    10921 tgcggtgctg cctgcgttag tgattggtgt gccgttgggc atctggtgct acttttccac
    10981 tgctcggcag ggggcaattt tttctctgct caatgtcatt cagaccgtgc cttcggtggc
    11041 gctctttggc ctgttgattg cgccgcttgc cgcgctggtt acggcctttc cgtggctggg
    11101 gaagctcggc atagcaggaa ccggaatgac acccgcactg attgcgctgg tgctctatgc
    11161 cttgctgccg ctggtgcgcg gcgtggtagt cggtttgaac cagatcccgc gcgatgtgct
    11221 ggagagcgcc agagcgatgg gcatgagcgg ggcgcagcga ttcctgcatg ttcagttacc
    11281 actggcgtta ccggtatttc tgcgcagcct gcgggtggtg atggtgcaaa ctgtaggtat
    11341 ggcggtgatt gcggcgttaa tcggcgcagg cggttttggt gcgctggttt tccaggggct
    11401 gctaagcagc gccattgatt tagtgttgct gggggtgatc ccggtaattg ttctggcggt
    11461 gcttaccgac gcgctgttcg atttgcttat cgcactgctg aaggtgaaac gtaatgattg
    11521 aatttagcca tgtcagcaaa ctgttcggcg cacaaaaagc cgttaacgat ctcaatctca
    11581 attttcagga agggagtttt tcggtgctga ttggcacatc tggctccggc aaatccacca
    11641 ccctgaaaat gattaaccgc ctggtggagc atgacagcgg agtgatccgc tttgccggag
    11701 aagaaattcg ctcgctgcca gtactggagt tgcgccgccg gatgggctat gccattcaat
    11761 ctattggcct gttcccccac tggagcgtgg cgcaaaacat cgctaccgtg ccgcaattac
    11821 aaaaatggtc gcgggcgcgg attgatgatc gtatcgacga attaatggcg ctactggggc
    11881 tggagtcaaa tttacgtgag cgttatccgc atcagctttc cggtggtcag cagcaacgtg
    11941 tgggagtggc gcgcgcactg gctgccgatc cgcaagtctt actgatggat gaaccttttg
    12001 gcgcactgga cccggtaacg cgcggcgcgt tgcaacaaga gatgacgcgc attcaccgtt
    12061 tgctggggcg taccattgtg ctggtcactc atgatattga tgaggcgcta cggctggcag
    12121 aacatctggt attgatggat cacggtgaag tggtgcagca ggggaatccg ctgacgatgc
    12181 tgactcgtcc ggcgaatgat tttgtccgcc agttttttgg acgtagtgaa ctgggggtgc
    12241 gcctgctttc gttacgtagt gtggcggatt acgtgcgtcg cgaagaacgg gcagaaggtg
    12301 aggcactggc agaagagatg acgctacgcg atgcgctctc cctgtttgtc gcgcggggat
    12361 gcgaggtgct gccggtggtg aacacgcagg gccagccttg cggcacgctg cattttcagg
    12421 atctgctgga ggaggcgtaa gcgtatgaag atgttgcgcg atccgctgtt ctggctcatt
    12481 gctttgtttg tggcactgat tttctggctg ccttacagcc agccgctgtt tgctgccttg
    12541 ttcccacaac tgccacgacc cgtttatcag caagaaagtt ttgcagctct ggcactggct
    12601 catttctggc tggtgggaat ttcgagtttg tttgcggtga tcattggcac tggtgccgga
    12661 attgctgtca ctcgcccgtg gggcgcggaa tttcgcccac tggtggaaac tattgccgcc
    12721 gttggacaga cttttccgcc tgtcgcagtg ctggcgattg ccgttccggt gatcggcttt
    12781 ggtctgcaac cagcgattat cgccttgatc ctttacggtg tgctgcccgt cctgcaggcg
    12841 acacttgccg ggctgggagc gattgatgcc agcgtgacag aagttgcgaa aggtatggga
    12901 atgagtcgta gtcagcgact gcgtaaggtc gagctaccgc tggcggctcc ggtgattctg
    12961 gcgggcgtgc gaacttcggt gattatcaac attggtacgg cgacgatcgc ctcaacggta
    13021 ggggccagca cgctgggtac gcccatcatc atcgggctta gcggatttaa taccgcgtat
    13081 gtgatccagg gggcgttact ggtggcactg gcggcgatca tcgcagaccg cctgtttgaa
    13141 aggctggtgc aggcgcttag ccagcacgca aaataaaggt ataacctgcg agcatgacgc
    13201 caccaattcc gccgaacgcc ataaacagga acagggcgat gaccccaatt ttagctatgc
    13261 gcatattgca ctccttatgt taacgaaagg attgtacagt aaagcgcatt tgttaacgaa
    13321 tcattaaatg ccgagtggga aaatatcatg gccttgttct tgccaactgg tgagttgctg
    13381 ctgttgggcg gaggttcgat tttcaccgca ccacaccagc aatgtacggc cttcgaatag
    13441 ttcagggcgt agttgattga gcgagtgggc gaggacatca atgcgccatc cttgttgact
    13501 ggcaatccag ccctccagcc acagacgggt ggtatcctga atattccagc caaccaccag
    13561 cgcatcttta ccctgttttt tacgtgccga agccagacaa atggcgatgt agttgatcag
    13621 tacgccgtcg aggatcgcca gcagcgcctg gagagtcggt tgttggcact gaagccgtcg
    13681 gcgcagagga ataaacagat gtgtggtgag tgtctgggcg gggtaatcct gaccgcgctc
    13741 tttgatccac gttcgcaggc tatgcagatt gccgctttgc aggtaggtca gtaatgtttc
    13801 ttgctgatcg cgccagccgt tctgcacatc aacattttca ttactgagca gcattttaac
    13861 tttgctgacc tgcacgccgt tgtcgatcca gcgtttgatc tcgcggatac ggtcaatatc
    13921 ggcatcgttg aacagtcgat gaccgccgtc tgtccgttgc ggtttcagca acccgtaacg
    13981 cctctgccac gcgcgtaacg tgacagggtt aatatcacaa agcaacgcca cttcaccaat
    14041 tgtgtaaagc gccatcgtct cacccttgct cgcgaggtcc cggtttaact ttagacgcag
    14101 ttttgcgaac caggtagttt tgcccgtttt ttgtgcatct atagggtgat tttatttttg
    14161 ccaggcgatt ttgagtgatc gtactcacga attctcattt ttctgcaaga gttcaaagaa
    14221 agttaaacgc aggcaatgta tgttacgcgt tttaaaggga agtgtggttt gcgggtatgt
    14281 acgattttaa tctggtgttg ctgctgcttc agcagatgtg cgttttttta gtcattgcgt
    14341 ggttaatgag taaaacgcca ttattcatac cgttaatgca ggtcacggtt cgtctgccgc
    14401 ataaatttct ctgctacatc gtcttttcca tcttctgcat catgggcact tggtttgggt
    14461 tgcacattga cgattctatt gccaataccc gtgcgatagg cgcggtaatg ggcggcttac
    14521 tcggcggtcc ggtcgtcggt gggctggttg gtctgaccgg cggcttacat cgatattcga
    14581 tggggggcat gaccgcgcta agttgcatga tctcaaccat cgttgaagga ttgctcggcg
    14641 gcctggtaca cagcatcctg atccgtcgcg ggcgcactga taaagtcttt aaccccatta
    14701 ccgccggtgc cgtcacgttc gtcgctgaaa tggtgcaaat gctgatcatc ctggcgatcg
    14761 cccgacctta tgaagatgcg gtgcgtctgg tgagtaatat tgctgcgcca atgatggtca
    14821 ccaataccgt cggcgcggcg ctgtttatgc gtatattgct cgataaacgc gcgatgtttg
    14881 aaaaatacac ttcggctttt tctgccactg cgctgaaagt ggcagcctcg acggaaggca
    14941 ttttgcgaca ggggtttaac gaagtgaaca gcatgaaagt ggcacaggtg ctgtatcagg
    15001 agctggatat tggtgcagtc gcgattaccg atcgagagaa attgctggcc tttaccggaa
    15061 ttggtgacga tcaccattta cccggcaaac cgatttcttc gacttacacc ttaaaagcga
    15121 ttgaaaccgg tgaagtggtc tacgctgatg gcaacgaagt accttatcgt tgctctttgc
    15181 atccgcaatg caaactgggg tcgacgctgg taattccgtt gcgtggtgaa aatcagcggg
    15241 tgatgggcac catcaaattg tatgaagcca aaaaccgttt attcagttca atcaaccgca
    15301 cgctgggcga ggggattgcg caactgcttt cggcgcagat cctcgccggg caatatgagc
    15361 ggcaaaaagc gatgctcacc cagtcagaga tcaaactgct tcacgcccag gtgaaccccc
    15421 attttttgtt taatgcgctt aacaccatta aagcggtgat ccgtcgcgac agcgaacagg
    15481 ccagccagct ggtgcagtat ctttccactt ttttccgcaa aaacttaaag cggccttcgg
    15541 agtttgttac tctcgccgac gaaattgaac atgtgaacgc ttatctgcaa attgaaaagg
    15601 cgcgcttcca gtcgcggttg caggtcaaca ttgctattcc gcaagaatta tcccagcagc
    15661 aattgcccgc gtttaccctg caaccgatag tggaaaacgc cattaaacat gggacatcac
    15721 aactgctgga tacagggcga gtggcaatca gcgcccgacg tgaggggcaa catttgatgc
    15781 tggagatcga agacaatgcc ggtttgtatc aaccggtaac caatgccagt gggctgggga
    15841 tgaatctggt ggataagcgt ttacgtgaac ggtttggcga tgactatgga ataagcgtcg
    15901 cctgtgagcc tgatagttac acccgaataa cgttacgact accatggagg gacgaggcat
    15961 gattaaagtc ttaattgtcg atgatgaacc gttagcacgg gagaacctgc gtgtattttt
    16021 gcaggagcag agcgatattg aaatcgttgg agagtgttca aacgccgtgg aagggatcgg
    16081 cgcggtgcat aaactgcgcc cggatgtgct gtttctcgat atccagatgc cgcgcatcag
    16141 tggtctggaa atggtgggga tgcttgaccc ggaacatcgc ccgtatattg tttttctcac
    16201 tgcgtttgac gaatacgcta ttaaagcctt tgaagaacat gcctttgatt atctgctgaa
    16261 gccaattgat gaagcgcgac tggagaaaac gctggcgcga ttgcgtcagg agcgcagcaa
    16321 gcaggatgtt tcgctgttac cggaaaatca acaggcgctg aaatttatcc cttgtacggg
    16381 gcatagtcgg atttatttgc tgcaaatgaa agatgtggca tttgtcagca gtcggatgag
    16441 cggtgtctac gttaccagcc acgaagggaa agagggcttt accgaattga cattacgtac
    16501 cctggaaagt cgtacaccac tactgcgctg ccatcgtcag tatctggtta acctcgcgca
    16561 tttacaggag attcgtctgg aagataacgg ccaggccgag ttgattttgc gtaatggctt
    16621 aaccgtgccg gtcagccgcc gttatctgaa aagcttaaaa gaggcgattg gcctgtaaaa
    16681 gactgctaaa atggcttttt gcctcatcaa cacctgaagg cctcatgata agtaacgata
    16741 ttctgcgcag cgtgcgctac attttgaaag ccaataataa tgacctggtg cgtattctgg
    16801 cgctgggtaa tgtcgaagcc accgcggaac agatcgccgt ctggctacgt aaagaagacg
    16861 aagagggttt tcagcgttgt ccggacattg ttttgtcgtc attcctcaat ggcctgattt
    16921 atgaaaaacg cggcaaggat gagtctgctc cggcactgga gccggaacgt cgcattaata
    16981 acaacatcgt gctgaaaaaa ttacgcatcg cgttttcgct gaaaaccgat gacattctgg
    17041 ctatcctcac cgaacagcag ttccgcgttt cgatgccgga aattacagcg atgatgcgcg
    17101 caccggatca taaaaacttc cgcgaatgcg gcgatcaatt tttacgttat tttctgcgtg
    17161 gactggcagc gcgccagcat gtgaagaaaa gctaagacgg gtatggcggc catgcgaaac
    17221 atggccgccg acagattatt tcacttcttt aaaaccagcg gctttcatca ccagttccat
    17281 ttgcgccata gtgatacctt ttttggcatc ttcagcagaa acgttgattc ctgaaatacc
    17341 ctgcagggct ttaaaatcca ctttttccat atcgatagtc acgttttcct gcgcgtaggt
    17401 atctgtatag gttaattttt cttcaacacc cgcgatgttt ttgtatttgg cgcttaacgg
    17461 ctcaagtgtc ttggcagcgt cttctttggt ggttgcacca atagaagcaa attgaatttt
    17521 ggtttcagaa gattgcttaa gcaccttgtc acctttgtag acataggtaa tggcaatttc
    17581 agtgccgttc agattggcgc tgaatttctt cgattcttct ttgtcaccgc agccagcaag
    17641 agagaaaacc agaacagatg caacaacgag ggaaaacagc ttattgaaag ccttcatgta
    17701 aaactccatt ttatttaatc aagaaactgg tgactctcac caggggctat atagaatatg
    17761 cctaataccg tgacgtgagc agtccggaac tggagtagaa ctcttagtaa aaagcactat
    17821 ttcatccttg ttgctgaagc atggggaata attgttcgca aagtaaaaca ccgttattca
    17881 ttgcttctac ccgtgcctcg ctttctgtat tacgaaattg tcccaacaca tgtgccagcc
    17941 gataaaaacc gaccgcggag aggtcattcg ccagcaactc tgcctgacta atagcgctct
    18001 gttcctgata gcgccagccg ttatggagca gttgaataag taacgcctgg cagcgcatca
    18061 gcaactgatg agcggtagac ggcacaggca aaacgctggc agaaggtagc ggtgccacag
    18121 gcgcagtttc tgcgtccagc gcccaggcgc gggtttttgt catcatcacc cgtggttcca
    18181 gtgtcaattg cccatcaaca aaactgacaa agccagaaac cagactcacg gggtcgtctg
    18241 tttgttgcaa aagcgccgcc atgcgttcaa cggcaaaagg agaacaggca gatgccggaa
    18301 gggataacgt caggagatta tcttcacctt cgccgctgat tacctgcgca tccagcgtct
    18361 ggcggctgct atcccaaccg agcgaaatac actcagcgac cggcagaata aataagttat
    18421 cgacctgatt aagaggccgt atgcaggcgg ggggacgctg gcgtaaatat tcccgcaaag
    18481 ccacaatgcc cggctggcgt aacggcgcgc tcaacatttg ccaggcatca ggcgacagcg
    18541 gcacaacgct gcttaagcgg ttgcgggtag ctaacagcag ctcgccatcg gcactgcgtt
    18601 ttgctgcttg tgaaacaatt tgcccacccg ccagtgcgcc agcctgaaaa ctaaacagcc
    18661 gacgcgtagc tgccggtgag ttttcctgtt cacttcgcgg ccaactgcgc gaaaggtgca
    18721 aaatactgcc ggtgtcggga tcggtaaacc agatgcgtaa accataatgc tcaatatcct
    18781 gccagcaacg catacctaaa gacaccagcc gcagatgatc aagctttgct tctccggcaa
    18841 tgccagagcc aacgaccgtg cgccacggca caggaggaac ttcaccaaca ctgtcgcgcc
    18901 gggccatctc ttgtgcgcaa tttaatcgac tgtttaatgc cgcaagctga cgtaagcatt
    18961 ctccggcatg atagtggctg gcgcgagtgt ggaaggcatc aacgcttgcc cgtagctgtc
    19021 gtagtgattc actcacccag cgccagttgc aggcctctgc cgcctgcaat gcgcggttga
    19081 atgctgcctc gtagtgaata agcggctggc tgatgccgcc aagccataat gcctggctta
    19141 attgctgaac atattgacga cacgtttggc cttcttcgct ggcaaacgga tcgtcagatg
    19201 atgtgacgtg ttcgctgcgc atctgccaga ttaaatggtt aaattctgct tgctgcgctt
    19261 tggcctcgac gaaggcctgc acagccagta cgacatgttc gcaaagtgtg ccttcaatac
    19321 aatcacaacg ggcgaaacga atactgctac gggaataaaa acgcacatcg ctcatcggta
    19381 agcgggcaga gggaatttcg cccggcgcac agaacaactc aatggtgatg cctttagcga
    19441 ccagcgcctg cgcgcgtttg cgggtggcat cgggcagggt agccagttct tccagccaga
    19501 ttgccggatc ccactcttct tctttttccg tgggctggac ggtggcacaa agtcgttgat
    19561 aacttaacac cagcatcacg cgatgacggc acatgccgct ggccccgcag ctgcactgag
    19621 cctctttcag tgcctggctg ttcgccagct gggtacggac accgtcactg aaggtggcga
    19681 ttaaagcgct gttctcatgg ctgatttccg ggacgttgcc attttccagt tccttaagac
    19741 tgcgcttaac aaaaccggca ttgcttaacg ccgtcagggc ctgcggtgtc agttctaata
    19801 attccggacg tagtgaattc atgactgaag attctccgca agccatgatg ccagctcgcc
    19861 cggtgtcatg gcggctattt gtgcgccgac atttaccagc gcctgggccg tatcgtggtc
    19921 atagcaaggt gttgctgtgc tatcgagcgc tgccagtccc agcactttga tgcagctctg
    19981 gacacacttt ttcacctgat gcgtcagtaa tgatgatgaa cccccttcgt aaaaatcgct
    20041 cacgaggata atgacgcttt tcgctggttg ttcaataagt tgccgaccat actccacggc
    20101 actggcgata ttggtcccgc cgcccaactg tactttcatt aataactcta ccggatcggc
    20161 aacgtctgcc gtgagatcaa cgacgcttgt gtcaaacgcc accagatggg tacgaatgcc
    20221 gggtaactgc cacaaacagg ccgccatcac cgcagagtgg atcaccgaat cgaccatcga
    20281 tccgctttga tcaaccagta agaccagttg ccattgttcg ctttggcgtt taatgcggct
    20341 gttaaagcgg ggggattcga tatacaactt gccgtgttgc gggtgccagt gttgcaggtt
    20401 ggcgcgcaga gtacttttga aatcaaagtt tcgcgccagt ggaataaatg aacggcgacg
    20461 gcgatcgcgg acaccagaaa aagcctgacg aacttccttt gccagtcgcg ccataatttc
    20521 ttcaacaacc tggcgcacta tctggcgggc ggcagccagt acttcgggat tcatcagatg
    20581 tttggtgtgc aaaacggcgc gtagcaggct ttccgaaggc tgcatacgtt ccagcacgtc
    20641 gagattcgtc accacatctt caatgccgta gcgcagtacg gcatcgcttt ccagtcgctc
    20701 aatcacctgt tgcggaaaca gagtgtgaat actgttgatc cactcagggg tggtgagatt
    20761 tgagccacct aatccaccag agcgttcacc acgctggagc cgttcaggat cgcgcccata
    20821 cagccactcc agcgcgtggt ctatctgccg ggcgttgtca tccagcccac aaagcgtcgt
    20881 ttctgccgct tcgccaagaa ttaatcgcca gcgttgtagc tcacgggtgg tcagaagatc
    20941 gttcagttca gacatggaaa actccccagt tttgcagcga tgccagtgcc tgctgttcga
    21001 gttgttgatg atgtgcaatg gcctgtggtg gacaatgcaa cggcatttgc agcgccgaaa
    21061 cgggaagttg cgccagttga taatgctcaa gcacctgatg cgccagcgtc ccgcgttctc
    21121 gtggtggtag ccaggccatc gccgcgcgta aatcgggcag ggcattgata aaatcggcat
    21181 cacttagttg atttaaatga ctgctgaaac cggcgataaa tgtcggctga caggccagtt
    21241 gatggcgggc cagcgccagc aaaccgtgca gcgcttcgcc ggattgtgcc ggggataact
    21301 gcgccagcat cgtcagcgcc gcttcggcac tggcgttagg atgttccaga cgcatcagtg
    21361 cgccatgagc cgcgccgcga tccagcgccg gggcatgaat tgcctgactg cgtcgctcca
    21421 gtaaggctac cgccgcagaa agagaaatgc cggggagttg cacaccgcta tgtagatcgc
    21481 gcaggatatg acacaacgct tgccagctat gcaggtgagc gtgaaactcc ttttcatctg
    21541 gtctgccgtt agattcacat agccacagcg tgcgatcgat agccgcgcat aacgtcgttt
    21601 gtaatatctg cgcgccttgc ataccgctaa tttcatccag ccgccataag gcatatagca
    21661 cttccagcgc ctggcccatt tcggcaaatt gattttcctg ggcgattaat aatgtgagtt
    21721 gctccagtaa ttgttgactg aaggacgcca gacccgctaa cgccgcctgg ctaagacatg
    21781 tggtgatact gccgattcca cccgcgtcca gcatatcggc ttctaattta tggcgtgcgg
    21841 cttcctgaag tgttgcacca aagcatgcgg cctcaatcaa tgccgcatgc tggctaagcg
    21901 ggcgggttaa tttccagtgt tcttcaccgt tgcctgcaag tgtcagtgta cttccctgct
    21961 ggcgtacaat cccagggatc tccagtattg ccagccgatg taacacctga ctttgcgcca
    22021 gcccatcggg ggtaaagcga tttaaggtaa gctccgccgg aagagagatt gcggtacgtt
    22081 ccagttcgca ggtgacatct tttggcagag gcggttgtgg cgtggaaggg gcaagtttac
    22141 cgaatccgtc acccgctaat gtgtctatca acgttagcag aatcggatcg gtatcgggat
    22201 gaataacgcc gcgatagctc cacggcaacg gtgcattcag ggcttcttta atcaacgagc
    22261 ctgctatggc atccagccag tcagtgcgta acggtagtgt gtgaccgcgc aactgtgcca
    22321 gtgccattgc atgcagatgt gcggcagcca tatccgcggt cgaagcaggc aagttgtgct
    22381 ggcgcaaacg ggtgagaacc gtttttagca gttgttcacc ggcctgctgt aagccccact
    22441 gccagcacca gttttgccag accggggcag gcataccgga aaggtatcct gccagcacat
    22501 caaggcgctt ttcactgtag ggcgtgagat aacaacctgt aatggcatct gccagcgagg
    22561 gcaattccgg cgtgttaatg tcctgcgggc attcgcgcca catttttgcc agtgccggag
    22621 cgtgccagcc accgcagacg actaacacgt cgccattatt ttgctgcacc gcccatgcaa
    22681 tccagcgagc cataaaggct tcgcgctgac gattgagtgc atcgccgggg aaatcgcccc
    22741 gcagttgggc aaaatagtgc gccagcgcag agggtaatgc agtttgctgg ctttcatctt
    22801 cgaacaagtg atcccacagg gtatcgctgt tatccatgcg ggtggcacgc agcagtaagg
    22861 cctggctttc atcttgcgta tcaggcgaat cgtcctcttc ttcactctgc gcccagcaag
    22921 gcaaatcgat gaagtaagtt tgtgcctgaa tacgacgtgc ggcttgtagc gcctgccact
    22981 ccggcgaaaa ttcagcaaat ggcgtccagg caccacgccc gggggctgca ccgtcctgat
    23041 actggcaata actgtaaata gctaccggaa gctggtgggc taaaaacagt tcgtctaccc
    23101 ggtcattaaa atcagccggg ccttcaatca atacgtatcg tggccgctgg ctttcgatta
    23161 acgatttcac cagccgggcg caggccggac tatgatgccg gatgccgaca attaacggct
    23221 cgctcatgcc tctttcctca cggcaggcgg tggcgggctt gataataagc ctgccagtga
    23281 gcttctttat gtgtggcgac acgctgttcg aagtaacggc gcagacgagc gcgatcttct
    23341 tcgttatctt tgacgatggt tccggcaata cagtccacca ggtcggcagg ctcccccgcg
    23401 cgattcgcta aaaaccaggc gcggacgcct acggcgtggg ccacgttcac ggcttcagcg
    23461 gtggacataa tcgctgtcag tgtatccatt gacgttttct tttcgccgtt ggcacgcaga
    23521 tcgcggaagg tgcgtaccag taactccagt actgcgtcag gcactttatg cggaataccg
    23581 ctatgggcca gcaaacgcgc cgaagcactg gcgaccagtt ccagctcctg ggcgaaatcc
    23641 ataatcggaa agacggtttc aaaatcgaag cgacgcttta gcgcagcact catttcattg
    23701 acgccgcgat cgcgggtatt ggctgtggca ataatattaa agccttcccg cgcatagagc
    23761 tgactggctt caccggtgag ttccggcacc gtcatcaccc tgtcagaaag catacctaac
    23821 agacagtctt gcacttccag cggtgtacgc gttatctctt caaaacggac aattttgccg
    23881 tcgcgcattc cctggtaaag cggggcaggg accagtgctt ccgttgacgg accatggttg
    23941 ataagcaggg cgtagttcca gccgtacttg atttgatctt cggtagtaga tgcgccgccc
    24001 tggatggtta acccggcatc gccgctaata gcggttgcca gtaattcaga caggagagat
    24061 tttgcggtgc caggttcccc caccaacatc aaaccgcgcc cggtggcaag agtgactaac
    24121 atgcgttcga cagcggaggg actaatcacc actttacggc taatattttg cgcgctatcg
    24181 ccaaggataa aagcacgggc cgcaggcaaa cttaactgcc aaccgggcgg gcaaggtgcg
    24241 ttatcatttt gttttaattt tgccagttca tcggcgtata acacagcagc aggcggacgc
    24301 tgcagatgat tattctgcgg tgacatatat tcatccctga aatgtattaa tgaaataaac
    24361 gatattttac gcgcaataaa tgtttggcgc attagttgtt tgagcgaaaa atatctggaa
    24421 agcagatcac agtaaataaa aaaacctgct ggtgaggcag gttcttttat ttactacttt
    24481 caggcctaac accacagcct gtgcaacatc gtgttccaac gaacgaatta taaccacggc
    24541 tggaccccgt tgcaattaag ataatgagat ttataatcca gaccgttggg acgttgcgcc
    24601 ggatcgaatc tatttcaagt cctggctacc ggacgggtgg tgctgcaggt ggtgccctga
    24661 tccggagtgc aacatcgtgg tccaacatac gtaaaccagt atcgacaggc agtgtaaggg
    24721 taaggtgctg gtgttgcgct ccttaataag gagagcggat ggacacgctg acacaaaagt
    24781 taaccgtgct
//
LOCUS       DAPGWB010000063        24564 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.063, whole genome shotgun sequence.
ACCESSION   DAPGWB010000063 DAPGWB010000000
VERSION     DAPGWB010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 24564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24564
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.063"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            205..510
                     /locus_tag="RHX79_002425"
     CDS             205..510
                     /locus_tag="RHX79_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309170.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197582.1"
                     /translation="MKHKLSAILMAFMLTTPAAFAAPEAANGTEATTGTTGTTTTTTG
                     ATTTAATTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR"
     gene            617..1261
                     /gene="gfcB"
                     /locus_tag="RHX79_002426"
     CDS             617..1261
                     /gene="gfcB"
                     /locus_tag="RHX79_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein GfcB"
                     /protein_id="HDV2197583.1"
                     /translation="MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQI
                     QALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLL
                     EVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNV
                     LCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP"
     gene            1258..2004
                     /locus_tag="RHX79_002427"
     CDS             1258..2004
                     /locus_tag="RHX79_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HDV2197584.1"
                     /translation="MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPVEN
                     VVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKS
                     VRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAG
                     QLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQL
                     WLGFSAHVLPEKYADLNDQIVSVLTQRVPD"
     gene            2004..4100
                     /locus_tag="RHX79_002428"
     CDS             2004..4100
                     /locus_tag="RHX79_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HDV2197585.1"
                     /translation="MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQ
                     MPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGD
                     QSYKDKSFDFKLRLWEEGHWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
                     WGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPL
                     RLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTN
                     FNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFDAPEIQLRDKTLYMS
                     GQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAG
                     TAPGQSEQLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGL
                     MSSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLN
                     NLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDASWALGVDVNYVKQRDWD
                     NMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVG
                     VWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRK
                     YQLYPMTAEREVPVGQ"
     gene            4146..5285
                     /locus_tag="RHX79_002429"
     CDS             4146..5285
                     /locus_tag="RHX79_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HDV2197586.1"
                     /translation="MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQY
                     DLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPE
                     LTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
                     VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQN
                     GVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGM
                     TLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQL
                     EPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN"
     gene            5273..5719
                     /gene="etp"
                     /locus_tag="RHX79_002430"
                     /gene_synonym="yccY"
     CDS             5273..5719
                     /gene="etp"
                     /locus_tag="RHX79_002430"
                     /gene_synonym="yccY"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-tyrosine-phosphatase Etp"
                     /protein_id="HDV2197587.1"
                     /translation="MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGL
                     VKHPADATAADVAANHGVSLDGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVR
                     GKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR"
     gene            5739..7919
                     /gene="etk"
                     /locus_tag="RHX79_002431"
     CDS             5739..7919
                     /gene="etk"
                     /locus_tag="RHX79_002431"
                     /EC_number="2.7.10.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase"
                     /protein_id="HDV2197588.1"
                     /translation="MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLI
                     AVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGK
                     TIAELNLRDIVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGEN
                     GHYTLEGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETF
                     TVSERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQL
                     PEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLY
                     KKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNR
                     QQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLR
                     RGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPA
                     DSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFI
                     DADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSEL
                     LMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVS
                     LSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE"
     gene            complement(8034..9332)
                     /gene="appA"
                     /locus_tag="RHX79_002432"
     CDS             complement(8034..9332)
                     /gene="appA"
                     /locus_tag="RHX79_002432"
                     /EC_number="3.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acid phosphatase/4-phytase"
                     /protein_id="HDV2197589.1"
                     /translation="MKAILIPFLSLLIPLTPQSAFAQSEPELKLESVVIVSRHGVRAP
                     TKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQS
                     GQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNA
                     NVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPS
                     ELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQF
                     YLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGG
                     ALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNT
                     PPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL"
     gene            complement(9412..9504)
                     /gene="cbdX"
                     /locus_tag="RHX79_002433"
     CDS             complement(9412..9504)
                     /gene="cbdX"
                     /locus_tag="RHX79_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit CbdX"
                     /protein_id="HDV2197590.1"
                     /translation="MWYLLWFVGILLMCSLSTLVLVWLDPRLKS"
     gene            complement(9517..10653)
                     /gene="appB"
                     /locus_tag="RHX79_002434"
     CDS             complement(9517..10653)
                     /gene="appB"
                     /locus_tag="RHX79_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDV2197591.1"
                     /translation="MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDD
                     ERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPL
                     AFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGS
                     FWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLA
                     GYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPL
                     LTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQL
                     TLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY"
     gene            complement(10665..12209)
                     /gene="appC"
                     /locus_tag="RHX79_002435"
     CDS             complement(10665..12209)
                     /gene="appC"
                     /locus_tag="RHX79_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit 1"
                     /protein_id="HDV2197592.1"
                     /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG
                     KTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALM
                     AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD
                     IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALR
                     SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE
                     QDQERNAFAIKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG
                     NREPHVLQAFRELEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI
                     MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP
                     WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ
                     PTQQQG"
     gene            complement(12343..13200)
                     /locus_tag="RHX79_002436"
     CDS             complement(12343..13200)
                     /locus_tag="RHX79_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein"
                     /protein_id="HDV2197593.1"
                     /translation="MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCA
                     HSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQA
                     DDSESEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPP
                     IDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIG
                     YGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVC
                     QWLAEAAPT"
     gene            complement(13197..13595)
                     /gene="hyaE"
                     /locus_tag="RHX79_002437"
     CDS             complement(13197..13595)
                     /gene="hyaE"
                     /locus_tag="RHX79_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-1 operon protein HyaE"
                     /protein_id="HDV2197594.1"
                     /translation="MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSD
                     PKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGN
                     YRGVLNGIHPWAELINLMRGLVEPQQERAS"
     gene            complement(13592..14179)
                     /locus_tag="RHX79_002438"
     CDS             complement(13592..14179)
                     /locus_tag="RHX79_002438"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 maturation protease"
                     /protein_id="HDV2197595.1"
                     /translation="MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDG
                     GTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSE
                     VLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLPAAEQAALAQLAAWGIVP
                     QPANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG"
     gene            complement(14176..14883)
                     /gene="hyaC"
                     /locus_tag="RHX79_002439"
     CDS             complement(14176..14883)
                     /gene="hyaC"
                     /locus_tag="RHX79_002439"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase b-type cytochrome subunit"
                     /protein_id="HDV2197596.1"
                     /translation="MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLP
                     SVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWW
                     QGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIF
                     APFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMV
                     NGYRSHKFGKISNKERS"
     gene            complement(14902..16695)
                     /gene="hyaB"
                     /locus_tag="RHX79_002440"
     CDS             complement(14902..16695)
                     /gene="hyaB"
                     /locus_tag="RHX79_002440"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase large subunit"
                     /protein_id="HDV2197597.1"
                     /translation="MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVIT
                     NAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDN
                     ANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSP
                     GYFFDVQNRLKKFVEGGQLGIFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVK
                     IHAVFGGKNPHPNWIVGGMPCAINIDESGAVGAVNMERLNLVQSIITRTADFINNVMI
                     PDALAIGQFNKPWSEIGTGLSDKCVLSYGAFPDIANDFGEKSLLMPGGAVINGDFNNV
                     LPVDLVDPQQVQEFVDHAWYRYPNDQVGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQ
                     ERYSWIKAPRWRGNAMEVGPLARTLIAYHKGDAATVESVDRMMSALNLPLSGIQSTLG
                     RILCRAHEAQWAAGKLQYFFDKLMTNLKNGNLATASTEKWEPATWPTECRGVGFTEAP
                     RGALGHWAAIRDGKIDLYQCVVPTTWNASPRDPKGQIGAYEAALMNTKMAIPEQPLEI
                     LRTLHSFDPCLACSTHVLGDDGSELISVQVR"
     gene            complement(16692..17810)
                     /gene="hyaA"
                     /locus_tag="RHX79_002441"
     CDS             complement(16692..17810)
                     /gene="hyaA"
                     /locus_tag="RHX79_002441"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 small subunit"
                     /protein_id="HDV2197598.1"
                     /translation="MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAW
                     ALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAE
                     EVFEDIIAQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTC
                     ASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVD
                     RMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACS
                     STRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV
                     VAAAVGVHAVASAVDQRRRHNQQPTETEHQPGNEDKQA"
     gene            18237..18324
                     /locus_tag="RHX79_002442"
     tRNA            18237..18324
                     /locus_tag="RHX79_002442"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18271..18273,aa:Ser,seq:tga)
     gene            complement(18815..19345)
                     /locus_tag="RHX79_002443"
     CDS             complement(18815..19345)
                     /locus_tag="RHX79_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001164143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HDV2197599.1"
                     /translation="MQHLKNITAGNPKTVAQYQLTKNFDVIWLFSEDGRNWYEEVSNF
                     QKDTIKMAYDDNNIIVAITRDASTLNPAGLSVVEVADITANRRADDSGQWMYLDGQVR
                     KREYSSEEVNRQTEQRKATLLSEADAIIRLLERSVRLNMATEEERTRLSAWERYSVLL
                     SRVDSANPEWPQKPEQ"
     gene            complement(19349..21934)
                     /locus_tag="RHX79_002444"
     CDS             complement(19349..21934)
                     /locus_tag="RHX79_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HDV2197600.1"
                     /translation="MAVKISGVLKDGAGKPVQNCTIHLKAKRNSTTVVVNTVASENPD
                     EAGRYSMDVEYGQYAVILLVDGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEA
                     LRRFELMVEEVARNASAVAQNTAAAKKSASDAGTSAREAATHATDAAGSARAASTSAG
                     QAASSAQSASSSAGTASAKAAEASKSAAAAESSKSAAATSAAAAKTSETNAAASQQSA
                     ATSASTATTKASEAATSARDAAASKEAAKSSETSAASSAGSAASSATAAGNSAKAAKT
                     SETNARSSETAAEQSASAAAGSETAAASSSREASVKAEEASASATAAGKSAESAASSA
                     SAATTKAGEATEQATAAARSASAARTSETNAKASETSAESSKTAAVSSASSAASSASS
                     ASASKDEAARLASEAQGSATTASAKATEAAGSATAAAQSKSTAESAATRAETAAKRAE
                     DIASAVALEDASTTKKGIVQLSSATNSTSESLAATPKAVKAACENAEKRLQKDKNGAD
                     VPDKDTFTKNIGACRAFGGAVSTTTGDWTTAQFIGWLESQGAFNHPYWMCKGSWSYGN
                     NKIITDTGCGNIHLAGAVIEVMGIKSAMTIRITTPTTSSGSGTANAQFTYINHGDGYS
                     PGWRRDYNTKNKPPAFALGKTGETLADTDAVAWNLDSGAYCAQDGGASSLILHFNTGE
                     GSCPAVQFRVNYRNGGIFYRSARDGYGFEADWERLFTTTGGTLDGAVGIGAQNTLGGH
                     SLALGRGDTGLKQNGDGNLDVYAGNARVMRFTNGSIQVSKGLNVSGRVNPSDYSNFDI
                     RYVRDIRLGTRVVQGMQKGVTYEKSGHVITGLCLVGDADGDNSAVYRPVQKYINGTWF
                     NVSQV"
     gene            complement(21993..>24564)
                     /locus_tag="RHX79_002445"
     CDS             complement(21993..>24564)
                     /locus_tag="RHX79_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HDV2197601.1"
                     /translation="IGQHCDQSVPDGFGGTEPRITCNAYLTTQRKAWDVLSDFCSAMR
                     CMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNAVEVNWID
                     PNNGWETATELVEDTQAIARYGRNVTKMDAFGCTSRGQAHRAGLWLIKTELLETQTVD
                     FSVGAEGLRHVPGDVIEICDDDYAGIRTGGRVLAVNSQTRTLTLDREITLPSSGTTLI
                     SLVDGSGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIREN
                     DDGTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQV
                     LARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTAETTYRFTQLALGNYRLTVRAV
                     NAWGQQGDPASVSFRIAAPAVPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSEKRI
                     TDIRQVETTARYLGTALYWIAASINIKPGHDYYFYIRSVNTVGKSAFVEAVGQPSDDA
                     SGYLDFFKGEIGKTHLAQELWTQIDNGQLAPDLAEIRTSITDVSNEITQTVNKKLEDQ
                     SAAIQQIQKVQVDTNNNLNSMWAVKLQQMQDGRLYIAGIGAGIENTPDGMQSQVLLAA
                     DRIAMVNPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNPPAFSLTPDGKLTA
                     KNADISGNVNANSGTLNNVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERW
                     PSGTITVRVYDDQPFDRQIVIPAVAFSGARHEREHNDIYSSCRLIVRKNGAEIYNRTA
                     LDNTLIYTGVIDMPAGRGHMTLEFSVSAWLVNDWYPTASISDLLVVVMKKSTAGISIS
                     "
BASE COUNT         5698 a         6751 c         6343 g         5772 t
ORIGIN      
        1 taagatttat cttatgctca caagtcgtat ttccagaggg ggatagttaa caatcttata
       61 tttccctctg cgcgcctttc ctacccgcag tatatagtgc aagcggtatg aggaaaggga
      121 gatttcacaa ggatgttata ctcaaagtag acaatcctga tctcaagcgt acgtattgtc
      181 catgcgatga ataaaggaaa agttatgaaa cacaagcttt ctgcaatcct tatggccttc
      241 atgttgacga cgccagctgc atttgctgcc cctgaagcag caaacgggac cgaggcaacg
      301 acgggtacta ctggcaccac aacgaccact accggtgcaa ccacgactgc ggctaccact
      361 ggtggcgtgg ctgctggcgc tgtcggcacg gcgacggttg tcggtgtggc aacggctgtt
      421 ggtgtggcga cgttggcagt tgttgcagca aatgacagtg gcgatggcgg ttctcataac
      481 acctcaacca ccacgtccac tacacgctaa tactgcttta acgcgtcgaa attaaagtta
      541 aatgataccc ggttgcgata ttcgtaccgg gctttagaga tttgcatttt tttaattaac
      601 ctttcaagga ttaaaggtgc gccctcttat tctatcgatt ttcgcactat ttcttgcggg
      661 atgtacgcac agccagcaaa gtatggtcga tacatttcgc gccagccttt tcgataatca
      721 ggatatcacc gtagcggatc agcagatcca ggcgttgcct tattccacga tgtatttacg
      781 ccttaatgaa gggcaacgaa tctttgtggt actgggatat atagaacaag aacaaagcaa
      841 atggttatcc caggataacg ccatgctggt tacccacaat ggacgtcttt taaaaaccgt
      901 caaacttaat aataatctgc tggaagtgac aaattccggg caggaccctc tgcgtaacgc
      961 gctggcaata aaagatggca gccgctggac gcgcgatatt ctctggagtg aagacaacca
     1021 ttttcgctct gcgaccctga gttctacttt ttcctttgct ggattagaga cgctgaatat
     1081 tgcgggtcgc aatgtgctgt gtaatgtctg gcaggaagag gtgacttcca cgcggccaga
     1141 aaaacagtgg caaaacacat tctgggtcga ttcggctact ggccaggttc gtcaaagtcg
     1201 gcaaatgtta ggcgcagggg ttattcccgt agaaatgacg tttcttaaac ccgcaccatg
     1261 aataaattac agtcgtattt cattgccagc gtactttacg taatgacacc ccatgccttt
     1321 gcgcaaggaa cggtgactat ttatctgcct ggcgaacaac agacactttc cgttggcccc
     1381 gtggaaaatg ttgtccagtt ggtgacacaa ccgcaactgc gcgatcgcct ctggtggcct
     1441 ggtgccttgc tgaccgactc tgcggcgaaa gctaaagcgc ttaaagacta ccaacatgtc
     1501 atggcacagc ttgcttcctg ggaagcagaa gctgacgacg atgtggcggc aacgattaaa
     1561 tccgtgcgcc agcagttact caatctcaat atcactggtc gcttaccggt caaactggac
     1621 cctgattttg tacgagtgga tgagaacagc aatcccccgt tggtcgggga ctatacgctc
     1681 tataccgtac agcgtccggt gactattact ctgctgggtg cggtttctgg ggccgggcaa
     1741 ttgccctggc aggcaggccg tagcgttacc gattatctgc aagatcaccc ccgccttgca
     1801 ggcgcggaca agaataacgt tatggtgatt acgcctgagg gtgagactgt cgtcgcccct
     1861 gttgccctgt ggaataaaag acatgtggaa ccaccgcctg gcagccagct ttggttgggc
     1921 ttttctgcgc atgtactgcc cgaaaaatat gctgatttaa atgaccagat tgtgtctgtt
     1981 ttaacgcaac gtgttcctga ctgatgaaga agaattctta tcttttaagc tgcctggcca
     2041 ttgccgtctc cagtgcctgt catgctgaag tattaaccta cccggatccg ctgggttcgt
     2101 cgcaatcaga ctttggcggc acaggattgt tgcagatgcc aaatgcgcgc atcgcaccgg
     2161 aaggtgaatt cagcgtcaac taccgggata acgatcaata ccggttctac tccacctccg
     2221 tggcgctgtt cccatggctg gaaggcacca ttcgttatac ggatgtgcgc acacgcaaat
     2281 atagccagtg ggaagatttc agcggcgatc agtcatacaa agacaaatca ttcgatttta
     2341 aacttcgcct gtgggaagaa ggtcactggc taccgcaagt ggcgtttggt aaacgtgata
     2401 ttgctggtac gggtctgttt gacggtgagt atctggtggc cagcaagcaa gcggggccat
     2461 ttgatttcac cctcgggatg gcatggggct acgccggtaa tgcgggcaat attaccaacc
     2521 cgttttgccg ggtgagcgat aaatattgtc atcgcgcaga gtctcacgat gcgggcgata
     2581 tcagctttag cgatatcttt cgtggcccgg cttccatctt tggcggcatt gagtatcaaa
     2641 cgccgtggaa tcccctgcgt ctgaaactcg aatacgatgg caacaattac cagaatgatt
     2701 tcgctggcaa actgcctcag gcaagccatt tcaacgtcgg tgcagtttat cgcgctgcca
     2761 gctgggcaga tctcaacctg agttatgaac gcggtaacac gttgatgttt ggtttcactt
     2821 tacggaccaa tttcaacgat ctgcgccctg ccctgcgcga tacgccaaaa ccggcatatc
     2881 aacctgcgcc tgaatctgaa ggattgcagt acaccacggt agcaaaccaa cttaccgccc
     2941 tgaagtataa cgcgggcttt gacgcgccag aaattcagct acgcgataag acgctgtata
     3001 tgtctggtca gcaatacaaa taccgtgact ctcgtgaagc ggtcgatcgt gccaaccgga
     3061 ttctggtgaa taacctgccg caaggcgttg agaagattag cgtgacgcaa aagcgcgagc
     3121 atatggcgat ggtgactacc gaaaccgacg tagccagcct gcgcaaacag ctggctggta
     3181 cagcgcctgg tcaatcagag caactgcaac aacaacgtgt tgaagcagaa gatctttctg
     3241 cctttggtcg gggctaccgt attcgtgaag atcgctttag ctactctttc aacccaacac
     3301 tttcacagtc gctgggcggc ccggaagatt tctatatgtt ccagctgggg ctgatgtcca
     3361 gtgcccgcta ctggtttacc gaccacctgc tgcttgatgg cggtattttc accaatattt
     3421 acaacaacta cgacaagttt aagtcttcgc tgttgcccgc ggactctacc ctgccccgcg
     3481 tgcgcacgca tatccgtgac tacgttcgca atgacgttta tctcaacaac ttgcaggcga
     3541 actattttgc tgacttaggc aatggtttct atggccaggt gtatggcggt tatctggaaa
     3601 cgatgtatgc cggtgtcggt tccgagctgc tttatcgccc gctagatgcc agctgggcgc
     3661 tgggtgtgga cgttaactac gtgaagcagc gtgactggga caacatgatg cgtttcaccg
     3721 attattccac gccaacaggt ttcgtgacgg cttactggaa cccgccgacg ctcaatggcg
     3781 tactgatgaa acttagcgtt gggcaatatc tggcaaaaga taaaggcgca acgatcgacg
     3841 tcgccaaacg ctttgacagc ggcgtggcgg taggggtatg ggcggcaatc agtaacgtat
     3901 ctaaagatga ctacggcgaa ggcggcttta gtaaaggttt ttatatctcg attccattcg
     3961 acttgatgac cattggacct aaccgcaacc gcgcggtggt ttcgtggaca ccattgacgc
     4021 gtgatggtgg acaaatgctg tcacgcaaat accagctcta tccaatgacg gcagagcgag
     4081 aagtaccggt tggacaataa cctgacgtaa ttcataacat tacattgact gataaatata
     4141 aaccaatgaa aaagaacatt tttaagtttt cggtactgac attggctgtt ctgtctttga
     4201 cagcatgtac ccttgttcct ggtcagaatt tatcgaccag taacaaggat gtcattgaac
     4261 tacctgacaa tcagtatgac ctggacaaaa tggtcaatat ctatcccgtc acgccaggat
     4321 tgattgatca gttgcgcgcc aaaccgatta tgtcgcaggc taacccggag ctggagcagc
     4381 aaatcgcaaa ctatgaatat cgtatcggga ttggtgatgt gttgatggtt acggtctggg
     4441 atcacccgga actaaccacc cccgcagggc aataccgtag cgccagtgat accggcaact
     4501 gggttaacgc cgatggtgcg attttctacc cctatattgg tcgcctgaaa gtggccggga
     4561 aaacacttac ccaagtacgc aacgagatta cagcgcgtct ggattcagtc attgaaagcc
     4621 cgcaagtcga tgtcagcgtc gcggcgttcc gctcgcaaaa agcgtacgtc accggcgaag
     4681 tcagcaaatc gggtcagcag ccgattacca atattcctct gaccatcatg gatgcgatta
     4741 acgccgcggg cggtctgacc gcagatgcag actggcgcaa cgtggtgctc acccagaatg
     4801 gcgtaaagac caaagtgaac ctctatgcgc tgatgcagcg tggcgacttg cgccagaaca
     4861 aactgctgca cccgggcgat attttattta ttccgcgcaa cgatgatctg aaagtcttcg
     4921 tgatgggtga agtgggtaaa cagagcacgc tgaaaatgga ccgcagcggt atgaccctgg
     4981 cggaagcgct gggtaacgct gagggtatga atcaggatgt cgctgatgcg acggggattt
     5041 ttgttattcg tgcaacgcaa aacaagcaga atggcaaaat cgccaatatt tatcagctga
     5101 atgcgaagga cgcatcggca atgatactcg gaacggaatt ccagcttgaa ccttacgaca
     5161 ttgtttatgt cactaccgcg ccgctggctc gttggaaccg tgtgatttct ctgctggtac
     5221 cgacgatttc cggggtgcat gacctgacag agacttcacg gtggattcaa acatggccca
     5281 actaaaattt aactcaatcc tggtggtttg taccggcaac atttgccgtt cgcccattgg
     5341 cgagcgcttg ctgcgtaaac gtctgccggg cgtaaaagtc aaatcggcag gtgttcatgg
     5401 tctggtaaaa caccctgcag atgcgacagc ggcagatgtt gccgctaatc atggcgtatc
     5461 tcttgatgga catgccggac gtaagctcac tgctgagatg gcacgaaatt acgatctgat
     5521 tctggcaatg gagtcggaac atattgctca ggttaccgca attgctcccg aggtccgcgg
     5581 gaagacaatg ctgtttgggc aatggctgga acagaaagag atcccggatc cctatcgtaa
     5641 aagtcaggac gcatttgaac atgtctacgg tatgttggag cgcgccagtc aggaatgggc
     5701 gaagcgcctc agccggtaat ttgagtttat aaaatacgat gacaactaaa aatatgaata
     5761 cgccaccagg cagcactcag gaaaatgaga tcgatctgct tcgtctggtc ggcgagttat
     5821 gggatcaccg taagtttatt atcagcgtga ccgcgttatt cacgctgatc gctgtcgctt
     5881 actcgctgtt aagcacacca atttatcagg cagatactct ggtccaggtt gagcaaaaac
     5941 agggcaacgc cattctcagc ggcctgagcg atatgatccc taactcatcg cccgagtctg
     6001 caccggagat ccaactgctg caatcgcgca tgattctcgg taaaaccatt gctgaactga
     6061 atctgcgcga catagttgag cagaagtatt ttccgattgt gggtcgcggc tgggcgagat
     6121 taaccaaaga aaaaccaggt gagctggcga tcagctggat gcatattcca caactgaatg
     6181 gtcaggatca gcaactgaca ctcacggttg gggaaaacgg ccactataca ctggaaggtg
     6241 aagagttcac cgtcaatggt atggtcggcc agcgtctgga aaaagatggc gttgcgctga
     6301 ctatcgcgga cattaaggcc aaaccaggaa cacagtttgt cctgagccag cgtaccgaac
     6361 tggaagcgat taacgcattg caggaaacct ttaccgttag cgaacgcagt aaagaaagcg
     6421 ggatgctgga acttaccatg actggtgatg atccccagtt gattactcgt attctgaaca
     6481 gcatcgctaa caactatttg caacagaata tcgctcgcca ggcggcgcag gattcacaaa
     6541 gccttgaatt cttacagcgc cagttacctg aagtgcgcag cgagctggac caggcggaag
     6601 aaaaactcaa cgtttatcgc cagcagcgcg attcggttga ccttaacctg gaagccaaag
     6661 ccgttcttga gcagattgtg aacgttgata atcaactcaa tgagctgacc ttccgcgagg
     6721 cagagatctc ccagctgtat aagaaagatc acccaactta tcgtgcgctg ctggaaaaac
     6781 gccagacgct ggagcaagaa cgcaaacgcc tgaataagcg ggtatcggca atgccttcca
     6841 cccaacagga agtgttgcgt ttaagtcgtg acgtagaagc gggccgtgcg gtatatctgc
     6901 aattacttaa ccgccagcag gagttgagta tttcgaaatc cagtgccatt ggtaacgtgc
     6961 ggattatcga cccggcagtc actcagccgc agccagtgaa accgaaaaaa gcgttgaatg
     7021 tggtgcttgg ttttattctt ggcctgttta tttctgtggg tgccgtgctg gcgcgtgcga
     7081 tgttgcgtcg tggtgtagaa gccccggaac aactggaaga gcacggcatc agcgtttatg
     7141 ccactatccc aatgtccgag tggctggata aacgcacccg tctgcgtaag aaaaatttat
     7201 tttctaatca gcagcgccat cgtactaaaa atatcccctt cctggcggtg gataacccgg
     7261 cggattctgc tgtggaagcc gtacgtgcgc tacgaaccag tctgcatttc gctatgatgg
     7321 agacggagaa taacattctg atgatcaccg gtgcgacgcc agacagtggt aaaacgtttg
     7381 tcagttcaac tctggcagcg gtgatcgccc agtccgatca aaaagtgtta tttattgatg
     7441 ccgacttacg ccgtggttat tcgcataacc tgtttaccgt gagtaatgaa catggcttgt
     7501 cggaatatct ggcaggtaaa gatgagctca acaaagtgat ccagcatttt ggcaaaggag
     7561 gctttgatgt gattactcgc ggtcaggtgc cacctaaccc gtctgaactg ctgatgcgcg
     7621 atcggatgcg tcaattactg gaatgggcga acgaccatta cgatctggtg attgtcgata
     7681 cgccgccgat gctggcggtg agtgatgccg cggtcgtggg gcgttctgtt ggcaccagcc
     7741 tgctggttgc gcgttttggc ttgaacaccg ccaaagaggt gagtttgtca atgcagcgtc
     7801 tggaacaggc aggcgtcaat attaaaggcg ctatcctcaa tggtgtgatt aaacgcgcca
     7861 gcaccgctta cagttacggc tataactatt acggttatag ttactccgag aaagagtaaa
     7921 actgaaagtg gccggatgcg gcgtgaacgc cttttccggt ctacgcatta gacagttctt
     7981 cgtttgtcat cagcctcaga gcattcaggt aactgaatgc tcttttttat gcattacaaa
     8041 ctgcacgccg gtatgcgtgc ttcattcacg atttgcgtaa aacctgccaa cgaacacatg
     8101 ccctgcgcat ttcgctcttc acatcctgcc agggtcagtt tcacctctcc gggcggcgta
     8161 tttaatgaca gcggcgtttt atcacgcatc tgctgtaaag tctggaagac cagcgaaacc
     8221 tgaatccact ggctgttatc gcttagccga cgccagcgtt caaacaccag ttcaccacct
     8281 ggcggcgtgt tatccggctg accgggaagc gtccagttga gctccagtgc gccgccgaga
     8341 tttgccagat tagtatcgtg tccggcgata aacagcactg aagtgggtaa tgtcacacca
     8401 tacgcctgtt tttgcggtgg atggggcgtc aacgctgtct tgatcaaatc taataacggg
     8461 gtggcgcggc tgcgggcaac ctctggcgtg cgttgtagca aataaaattg cgcgttatgc
     8521 aaacttagca aggtgttcca ctggtgtgaa tcggtgatcc ttccccaccc cggctccggc
     8581 attccctgtg cttgttgcag gagaaatatc tccgtcagca ttgatgcgag gcttaccgca
     8641 ccggttaatg agacattgtc ggcgctcacc ttgagttccg atggtaatgc ctgcgttaat
     8701 gaacagcttt cgtcctgttt ctcacgttta aggcacaagt ttgattgcgg aaaattaagc
     8761 acccgttcca gttcgcgaaa cgccgtttgc cgatgcccgg taaagtcagc aattgaccct
     8821 cctgccctgc tgaggatcgc gtcagtcacg ttcgcgttat ccagttggca aacgccagtt
     8881 tttagaggat taaataacgg atcgggactg gacgtatctg cctgggtatg tacggttatt
     8941 gcacagtcag gtgccagccc ggcggcgaag gcttcgcctg ttttacgggt acgctcgtcg
     9001 acatcagcaa taatcgcgac ctgaccagac tgcgggcagc cctttttcgc cagcaatccg
     9061 tcggctacca gacgctggcg ttggtaatgt ccgagatagg cgattagctc accaccgcgc
     9121 ggtgtcagcc aacccagttt taccggccag gttggccatg cgtctggggt gacatcctgc
     9181 atcagttgcg tggccttggt tggagcacgc acaccatgac gactgacaat caccacactt
     9241 tccagcttca gctccggctc actctgagcg aatgcagatt gcggggttaa cggaatcaga
     9301 agagataaaa atgggattaa gatcgctttc atcgatatgt ttccgctttt catatctgac
     9361 attattgatt gcctgatgcg atgctaatgc gccgcatcag gcctacgttc gttaactttt
     9421 cagacgcggg tccagccata ccaacacaag ggtggagagc gaacacatca acaaaatgcc
     9481 gacgaaccaa agtaaatacc acattgttcc tgctccttag tacaactcgt tttcgttacg
     9541 gcggagagtt tctgttgtca tgcgtcccca cattttgtag tagctccaga gagtgtagag
     9601 caacacaatg ggcaaaaata tcagcacgat taccaacata atgctcagcg tcagctgact
     9661 ggaagtgctg tcccacaacg tcaggctgga gattggactc acgcttgacg gcatgacaaa
     9721 ggggaacagc gtgatgcctg ccgtgaaaat cacgccaaat tgcatcaatg acgccattaa
     9781 aaatccccaa cccgggcgac cacgataaat cgccatcacc gtcagcaatg ggcagaagaa
     9841 ccccagcagc gggaagatcc acaaaacggg cgattcgacg aaattattca tccaggcacc
     9901 aggtagcact gccaccagtt tcattaacgg attggaagga ccgttagcat cctgggcgag
     9961 cagtacaaag ccatcaatac cgacccacag ccagtaaccc gccagcaaaa agcacagcat
    10021 caccaacagt gcagcgcgtt tggtggccag ctgtgaacgc agatgaatca caccaacagt
    10081 tttcagttgt aaccagacgc caccttgcaa aatcaccatc ccaaggctga gcaatccgca
    10141 caataaaggg aatggcgtca gcagttgcca gaagctgccg agatactcca cgcgtaattg
    10201 cggtgtgaag gcaaacggca cgccgagcaa taagttgccg aaggcgatac cgaagactac
    10261 cggcggcacc agactgccga tgaccagacc ggcgtcccac attttacgcc agcgtgcatc
    10321 ggcgattttt ccgcgataat caaaggccag cgggcggaag aacagtgagc acagcaccag
    10381 gatcatcgcc acataaaagc cggaaaacgc cgctgcatac actctgggcc aggcggcaaa
    10441 taatgcccca ccagcgagga tcaaccagac ctggttgcct tcccagtgtg caccaacgct
    10501 gtttatcact atccggcgtt catcatcatt acgcgccacc agcggcagca gacagccgat
    10561 ccccatgtca aatccgtcgg agatcataaa gaccaccagg atcacgccaa tcagcagcca
    10621 ccagatgaag cgcaatgttt cataatcaaa catgattttc tcctttaccc ctgttgctgc
    10681 gtcggttgtt cactctgcat cgcgctcggc cccagacggg catatttctg catcaggtag
    10741 acttcggcga ttaagaacag ggtgtaaagc cctacgatca tgatcagtga gaaagccagt
    10801 tgtcctgtgg ttaaagcgga gtgcgcggag tatgtcggta agatgtcctg tatcgcccac
    10861 ggctgacgac caaactcggt cataaaccac ccggcttcaa tcgcaatcca cggcaacggc
    10921 aaactccaga gcgccatttt cagcacccag cgatgctggt cgattttgcc acgcagcgtc
    10981 tggacaagcg caatcagcat caccagtagc agcagggaac cacagcccac catgatgcgg
    11041 aaactccaga ataccggcgc aacctgaggt atcgcgccac gcatcgccgc ctggtactgt
    11101 gcggctgtga catgattcat atccggcgca tagcgggaga gcaacatgcc gtagcccagg
    11161 tcaccttcca gttcccggaa tgcctgcaac acatgcggct cacgattgcc ttgcgatatt
    11221 tcctgcatta acagccaggc catacgtccg cgttgcaagc gtgggtaggt ttcagccatc
    11281 aaattcttca gacccggcac gggtttatct aatgagtgag tggcgaggat ccctagcagc
    11341 gcgggaattt tgatggcaaa ggcgttacgc tcttgatcct gttccggcca ggcaaccaca
    11401 tggaacggtg caggtgcagg ttccgtttgc cactcccctt ccatcgccgc cagttttacc
    11461 ggttgtactt gcgcgacttc atacgcagaa ctgtctccga gttgcagggt accgataatc
    11521 gccagagtac cgaagacgga accgatggca aacgaacgta atgcgacatc gcgctcccgt
    11581 ccgcgcagta aataccaggc gctgatcgcc ataataaaca tggccccggt cacgtagccc
    11641 gccattacgg tgtgcacaaa tttcacctgg ctgaccgggt taaagaccag ctcgctgaag
    11701 ctggtcatct ccatacgcag ggtgtcgata tcaaaatgcg caccggtcgg gtattgcatc
    11761 caaccgttgg cattcaatat ccacaacgca gagagatttg aaccgaacgc caccagccac
    11821 gtcaccagca ggtgctggta tttattcagc cgttgccagc cgaagaagaa cagcccgaca
    11881 aaggtggatt cgaggaagaa ggccattaat gcttccatcg ccagtggtgc gccaaaaata
    11941 tcgcccacat agttggaata gaatgaccag ttagtaccaa actgaaactc catggtcagg
    12001 ccggtagcca cgccaagagc aaaattgata ccgaagagct taccccagaa gcgcgtcata
    12061 tcgcggtaga ttgttttgcc ggtgaccacg taaatggttt ccatgatagc cagcaaaaaa
    12121 atcagcccca gggtaagggg tacaaataaa aagtgataca gcgcggtcag agcaaactgc
    12181 cagcgcgata aatcaatgac atcccacatg cgcactcctg taggcgaaga gagaaaaata
    12241 acccgataat ggtagatctc cctctttatc ctgaaactct acgaccagag gtattcgccg
    12301 attgcgatat tcataagact gaaagcgata cttaccgtct ttttacgtcg gtgcagcttc
    12361 cgccagccac tgacatacct cgctaagccg ctgcgcagag tcgaccaaat cttctggcgc
    12421 tgccagcacc acttccggta ttgggcagat ttcataactt tccagtaacg ggccttttaa
    12481 ggtgtccgta cagcgtaaat gccagacatg gcgtaacccc gtggcgttga tatagctctc
    12541 gccatagcca atggtacgaa tctgaatatt tcccggccca cagagacgtg agagaaaaag
    12601 ccgatcagcc tcgctgatgg gtaattgcgt cagattaatg ctgtgcggct gcgcgtcggg
    12661 gttacgtaca tgtgccagta actcatgcgc caacggtagg ccattcatca ggccatcaat
    12721 gggcggcggt aacagcgaat ctgtcggcaa gagattttgc gttgccgcct gccacaacgc
    12781 cagcggcgcg cagccagcct ccagtttgtc ctccagcaac ttttcgccgc gacgtctgcg
    12841 cacccgccat aatccgcaga agatcgcctc ctgtatttca ctttcactgt cgtcagcctg
    12901 ctgaatgcgc actgacactt ccccttcccc gagaagcgta ttgataaagt gacgatcgtc
    12961 ggcgttgaga tttaacagat cgactgccag cacctcgccc aacggcggtt ggcgttcgct
    13021 tagttgatgt tgtaactcgt ttaacagcgc aatcacctgc gggctgtgag cacattgctc
    13081 cagggccgcc atactcggtt catcattcac ctgacaggtg atcggcagtg gattcatgct
    13141 gaaactgtca tcgttcggtt gcgttcctgg ccccagcaga tggaaaaaag tttcgctcat
    13201 gaggcacgct cctgctgcgg ttcgacaagc ccgcgcatca ggtttatcag ttccgcccac
    13261 gggtgaatac cattcagcac gccgcgatag tttccgccgg taaacactaa agtggcagga
    13321 aagcgaaaga cgccaaagcg atcgccgatg gcttcgctct gctcaaggtc agcaatcgcc
    13381 acctgccatg tatagtcggg aaactcgcgc agtaattcgc caatcattac cggattatcg
    13441 ctgacctctg gcgtgcgttt cgggtcactg cttaataaca ccacgccgtc tggcgcttgc
    13501 gtaagccagt cgtcaagacg ggattcactg actggcgtcc agccgcgcgc cagcattcgt
    13561 tgccacaacg catcaaatgg cgtgtcgttg ctcatccctg ctcctcctgt gtcatccggt
    13621 actggcgcaa gcgaacgcct tcgtaatttt ccatcgacag acagtcataa ttgagacagc
    13681 gcgattcatt agccggttgc ggcacaattc cccacgcagc cagctgcgcc agcgccgcct
    13741 gttccgcagc gggcagttgc tcccgtgcca gttcgctcag gctaccgccg tagtcgtcga
    13801 gcattgcggg ttgcagaccg acgagggcaa tatgtgctgg cagatgtccg cggatatccg
    13861 ccagcgccaa cacttcggag aaactgttct gatgcaggct cattttcttc gcgctgagat
    13921 aagccggaat gcgttctccg gcataggttc gcagcgttcc aggttccagc ccgtagtcaa
    13981 tggcatcgag aatcaacaga tggctggcgc tttcgacata ccccagcaag ttcagtccct
    14041 gagtaccgcc atcgacaatc tccacatact cgggccagtg gtaatgggca tacagccgtt
    14101 ccgccacccg cacgccgaag ccttcatcgg cccacagcag gttgcccagc cccatgacca
    14161 ccacgcgttg ctcgctcatg aacgctcctt gttacttatt ttgccaaatt tgtggctacg
    14221 gtagccgttg accatggtgg agatcaccgt gtcgtcggac atgatgtctt cacgcagcgc
    14281 catgtagaca tgaccgatca caaacgcgcc aatcagccac atccccagcc gatgccagct
    14341 gtgaatgtcc attgagttgc cacccgtcca gtagaaaaat tccaccacat aacggaacgg
    14401 cgcaaaaata gcgtactggc tgtgttcgct gtacagcgca aaaccagtga tgatcataaa
    14461 gaccgacatc aggaaatagc cgaacatcgc cgcctgggcg atgggattat ggcctatatc
    14521 ggcactcgga cgttttgcca gaaacagata ccagcggatt tcataccaca cgccctgcca
    14581 ccagctttta cgccataccg gcacgataaa cagctcgcgg gagtatcgat tgccaacaaa
    14641 agcccagtag atccgcatca gcaaaaccac ggtaaaaacc atcccggcgc tgaagtgaat
    14701 taacctgatg tagcccatat agaacagata cgtcgcctcg ccgctgacgg aaggtagcgg
    14761 cttgccgata aagtatccgg tgaccatcaa caccgccatg cataacaccg tcaaccagtg
    14821 ccagatgcgg actggcgctt caaagacata gtggctgaca acgttgtcgc ttttctgttg
    14881 catgatgatt ctccttcgct gttaacgcac ctgcacggag atcagctcgc taccgtcgtc
    14941 gcccagcacg tgtgttgaac aggcgaggca cgggtcaaag ctgtgcagag tacgcaggat
    15001 ctccagcggt tgctcgggga tcgccatttt ggtgttcatc agcgccgctt cataagcgcc
    15061 aatctgccct ttgggatcgc gcgggctggc gttccaggtg gtcggcacca cgcactggta
    15121 gagatcaatc ttgccatcgc gaatggcggc ccagtggcct aacgccccgc gcggcgcttc
    15181 ggtaaaaccg acaccacggc actctgtcgg ccaggttgca ggttcccatt tttccgtgga
    15241 agcagtggcg agattgccgt ttttcaggtt ggtcatcagc ttgtcgaaga aatactgcaa
    15301 cttacctgcg gcccactgcg cttcgtgcgc gcggcacaaa atgcggccta acgttgactg
    15361 gataccggaa agcggcaggt tcaacgccga catcatgcga tcgaccgact caacggtcgc
    15421 agcatcgcct ttgtgataag cgattaacgt gcgcgccagc ggccccactt ccatcgcgtt
    15481 accgcgccag cgtggcgctt tgatccacga gtagcgttcc tgttcattca gctgctgaat
    15541 gttggtatcg ctgcctttga catcgccggg gttgtaccac gggtcggtga tgccatcgaa
    15601 cggatgacgc ccgacctgat cgttgggata tcgataccag gcgtggtcga caaactcctg
    15661 cacctgctgc ggatcaacca aatccactgg cagcacattg ttgaagtcgc cgttaatcac
    15721 cgcgccgcca ggcatcagca gacttttctc gccaaagtcg ttggcaatat ccgggaatgc
    15781 gccgtagctg agaacgcatt tatcagaaag accagtgccg atttcgctcc acggtttgtt
    15841 gaactgaccg atggctaagg cgtcggggat catcacgttg ttaatgaagt ccgccgtgcg
    15901 ggtgataatt gactgcacca ggttcaggcg ttccatattg actgccccga ccgcgccgct
    15961 ttcgtcaatg ttgatggcgc aaggcatccc gccgacaatc cagtttggat gcgggttttt
    16021 accgccaaag accgcgtgga ttttcacaat ttcacgctgg aaatcgagag cttcgaggta
    16081 gtgggcaaag cccatcaggt tggcttctgg cggcaacttg tactgcgggt gcccccagta
    16141 gccattgcgg aagatcccca actgcccgcc ttcaacgaat tttttcaggc ggttttgtac
    16201 gtcgaagaaa tagcccgggg atgatttcgg ccaagaggag agactttgcg ccagttcgga
    16261 ggttttccgc gggtcggctt tcagcgcatc taacacatcg atccagtcca tcccggcaag
    16321 ctgatagaag tgcaccagat gatcgtggca ccagagcgtt gccagcataa tgttgcggat
    16381 gatattggcg ttgtccggca ctttaatacc gatagcatct tcgatggcgt aaaccgaagc
    16441 cagggcgtgt acgccagtac agacgccgca gatacgttca acgaacgccc acgcatcgcg
    16501 cgggtcgcgc ccttgcagaa tgatctccag cccgcgaaac atggtgccgc aggagacggc
    16561 attggtgatc acattctgat cgttaatatt cacttcgcag cgcatgtggc cttcgatgcg
    16621 cgtaatcggg tcgaccacca ggcggcgtcc ggcattattg atagtgtatc cctgagtttc
    16681 gtactgagtg ctcatgcctg tttatcctca ttgcctggct gatgttcggt ttctgtaggt
    16741 tgctggttat gacgtctgcg ctggtcaacg gcgctggcga ctgcgtgcac accaacagcc
    16801 gctgccacca cgccaagcgc ggttaaaccg acggtatcgg cagtggaatg agtacccatt
    16861 tgcggaatat cgaccacgcg gctgtagaac gaaccgcgat cccagaaacc attttccgca
    16921 cagcccaggc agccgtgacc agactggatt gggaaagaaa cgccatcatt ccagcgggtg
    16981 gaggaacagg cgttataggt ggttggccct ttgcaaccca ttttgtacag gcagtaacct
    17041 ttgcgggcag cgtcatcatc ccaactctgg acgaactctc cggcgtcgaa gtgggcgcgg
    17101 cgatagcatt tatcgtggat tcgctgacca tagaacatca atggacggcc cattctgtcg
    17161 acatctggca agcgatcaaa ggtcaccatg taagtaatga tggcgctcat cacatccggg
    17221 atcggcgggc agccaggtac tttgataatg ggtttgtcgg tgatgacttt gtcgataggc
    17281 gttgcctgcg tcggattggg ccgcgcggcc tgcacgcagc cccaggacgc gcaggttccc
    17341 caggcgataa tcgcgctggc tccggcagcg gcacgtttga gtttctcaat aaacggtcga
    17401 ccgctgctga tacagaacat cccctgctcg cccagcggcg gattaccttc tactgcgagg
    17461 atatatttgc cattgtattg cgcgatgatg tcttcaaaga cttcttccgc ctgggttccg
    17521 gcggcagcca tcaaagtatc gtcgtaatcg agggaaatca gggaaaggat gacgtccttc
    17581 gccagtgggt gagcggagcg gataaaagat tcggtacagc aggtgcattc cagaccgtgg
    17641 atccatacca ccggaatgcg gggtttgttc tccagcgccc aggcaatctt tggtgccatt
    17701 cccgcgccta atcccagcga cgtggcagcc agactacaat atttgagaaa gctgcgccgg
    17761 gtaacgccct gacgccgcat ggcctggtaa aatgtttcct cgttattcat atcgcacgtc
    17821 tcttctcctt gcgacaccgg caggacaccg ggcgcacatg gtcggcaagc gacgtccctg
    17881 tagcaaggca aaccatcgct tcacgtgaga tgctgaaaac gaaagctcat ccttctgcac
    17941 tggcacacgt cgccagaaag tattgttaat aaagcgtagt gaaacttttg cacaaaacaa
    18001 tacaaactgt gtggatttat cttttagcga taaaaatgga cctatttttc ttttggccgg
    18061 gcggtgggga tgtttagccg gttgctaaac gagtaaaaga gaaggaattc atggtgatga
    18121 aatgatcaat ctgctgttat ttcacgctat caatgcactt ttggctgttt ttcaggcaaa
    18181 caaacaaatt aggggtttac acgccgcatc gggatgttta tagtgcgcgt cattccggaa
    18241 gtgtggccga gcggttgaag gcaccggtct tgaaaaccgg cgacccgaaa gggttccaga
    18301 gttcgaatct ctgcgcttcc gccaaataat caaggggtta ccaaatggta gcccctttgc
    18361 tttttgggct cttggtataa acttggtata ccaattggta tattttctgc caaaaaattc
    18421 ctaaaatccc ctccagcaca aacaatcact tgctcattca tacttatcaa gaaaatatcc
    18481 ttgcaagtta tgttgtttct ttctgcgtcc cgacagggtg tcatggttcc ccacttctct
    18541 cgggatggac acttaacgga cgagaaattt tcaggtgtca ttcagacgcg cttcggcccc
    18601 ggattggcga agcgcgcttt ttttctcaga ttatttcgtt ttgcctgagt gttgaataac
    18661 gccactacag ttatataagc tggaaatcat tcaatactcg cactatcgaa agttcaccag
    18721 ccaaccgcag cacattcctg catacgacgt gtctgcggct tttttcatct ctgcctgtaa
    18781 ttactgatta acgtaaaatc ctcttccccg atatttactg ctctggcttt tgtggccatt
    18841 ccgggttcgc tgaatccacc cggctgagca ggacgctgta acgctcccat gccgacagcc
    18901 gggttcgctc ttcttccgta gccatattca gccttactga ccgctccaga agccggatga
    18961 tggcatctgc ttcactgagc agcgtggcct tgcgttgctc tgtctgtctg ttgacttcct
    19021 ctgacgaata ctcacgtttc ctcacctgac cgtccagata catccactgc cccgaatcgt
    19081 ctgcacggcg gttcgccgtt atatctgcca cctcaacaac acttaatccc gccggattaa
    19141 gcgttgaggc atcccgggtg atggcaacga taatattgtt atcatcgtaa gccatcttta
    19201 ttgtgtcttt ctgaaagtta ctcacttctt cataccagtt tcttccgtcc tctgaaaaca
    19261 accagataac atcaaaattt tttgtcagtt gatactgagc aacggttttg ggattacctg
    19321 ctgtaatatt ttttaagtgc tgcattactt atacctgcga tacgttaaac catgtgccgt
    19381 ttatgtattt ttgcaccggc cggtaaaccg ctgagttatc gccatcagca tccccgacaa
    19441 gacaaagccc cgtaatgaca tggccggatt tctcatacgt cacgcctttt tgcatgccct
    19501 gaacaacacg cgtacccagc cggatatccc tgacatagcg gatatcaaaa ttactgtaat
    19561 cggaaggatt aacgcgcccg gacacattca gccctttact gacctgaatg ctgccgtttg
    19621 taaagcgcat tacacgtgcg ttaccggcgt aaacatcaag attaccgtcg ccgttttgtt
    19681 tcaggcctgt gtcgcccctc cccagcgcaa gtgaatgacc gcccagcgta ttctgtgcac
    19741 cgatacccac cgcgccatcc agggtcccgc ccgttgtcgt gaacagacgc tcccagtccg
    19801 cctcaaagcc atagccatca cgggcggagc ggtaaaatat cccgccattt cggtaattca
    19861 cccgaaactg gaccgcaggg cagctgcctt cccctgtatt aaaatgaaga attaaggatg
    19921 atgcgccacc atcctgtgca caataagcgc cactgtccag gttccaggcg acagcatctg
    19981 tatcggcgag cgtttccccg gtttttccca gcgcaaaggc cggtggcttg tttttcgtgt
    20041 tgtagtcacg acgccagcca ggggaataac catcaccatg attaatatag gtaaactgcg
    20101 cattcgccgt tccacttccg ctggatgttg tcggtgtggt tatgcggatc gtcatcgctg
    20161 actttatccc catcacctca atgacagcgc cggcgagatg aatatttccg cagcccgtat
    20221 ccgtgatgat tttattatta ccgtaagacc aggagccctt gcacatccag tatgggtggt
    20281 taaatgcgcc ctgagactcc agccacccga taaactgtgc ggtcgtccag tctcctgtcg
    20341 ttgtgcttac ggccccaccg aaagcacggc aggcaccaat atttttcgta aaggtgtctt
    20401 tgtcggggac atccgcaccg ttcttatctt tctgcagtcg tttctcagca ttctcacagg
    20461 cggcttttac tgcctttggt gttgccgcca gtgactcgga agtgctgttg gttgcactgc
    20521 tgagctggac tatccccttt ttcgtcgtgc tcgcatcctc aagcgccacg gcagacgcaa
    20581 tatcctccgc ccgttttgcc gcagtctcag cgcgcgttgc cgcggattct gccgtgcttt
    20641 tgctctgtgc tgccgctgtc gcactgccag ctgcctctgt cgccttcgcg gatgccgtcg
    20701 tggcactgcc ctgcgcctct gacgccagcc ttgccgcctc atcttttgaa gctgacgccg
    20761 atgatgctga tgacgccgcc gaactggcgg acgatacggc tgccgttttt gaggattctg
    20821 cgctggtttc cgacgctttc gcgttcgtct cggatgtcct cgcagcggaa gcagacctcg
    20881 ctgctgcagt ggcctgttca gtggcttcgc cagccttcgt tgtggctgct gaagcggacg
    20941 atgcggcgct ttctgccgat tttccggcgg cggtggcact ggctgaggcc tcctccgctt
    21001 taactgacgc ctcacgggac gatgatgcag cggcagtttc tgagcctgct gctgcggagg
    21061 cactctgttc cgctgccgtt tcagaagacc tggcgttcgt ctcagacgtc tttgccgcct
    21121 tcgcggaatt tcctgccgcc gttgccgagg aagctgcgct accggcgctc gaggctgcgc
    21181 tcgtttctga tgattttgcc gcctcttttg aggccgccgc atccctggct gacgtggcag
    21241 cttctgacgc tttcgtggtc gcagtggatg cagacgtggc ggctgattgt tgtgacgctg
    21301 ccgcattcgt ttctgacgtt tttgccgcag cggcactggt ggccgccgcg ctttttgagg
    21361 actctgcagc ggcagcactt tttgatgcct cagcggcctt tgctgatgcc gttcctgcgc
    21421 tggaagacgc tgactgagcc gacgaagcgg cctgtccggc tgacgtgctg gctgcgcgtg
    21481 ctgagcctgc agcatcagtc gcatgggttg ccgcctcacg ggctgatgta ccggcatcgc
    21541 tggcggattt tttcgcagct gccgtgttct gtgccactgc ggacgcgtta cgcgccacct
    21601 cttccaccat tagttcaaaa cggcgcagtg cctccggacg ggcatcatcc tccgtcatgg
    21661 caccgagaaa atcattcagt gtaccgggtt gagaatcttc atacacggtg atggtcccgg
    21721 catgtgacgg cgggaaaccg tcaaccagca ggatgacagc gtactggcca tactcaacat
    21781 ccatactgta acgcccggct tcatccggat tttctgaggc caccgtgttc accaccaccg
    21841 tggtactgtt acgttttgct ttcagatgaa tggtgcagtt ctgtaccggt ttacctgcac
    21901 cgtctttcag cacgcctgaa atctttactg ccatattcgt tccacaaata aaaaaggtgc
    21961 catttctggc acccggtctg gtttctgaac attcagctga tactgatacc ggctgtggat
    22021 ttcttcatca ccacaaccag caaatcgctg atgcttgccg tgggatacca gtcattcacc
    22081 agccacgctg ataccgaaaa ctccagcgtc atgtgaccgc gacccgctgg catatcaatc
    22141 acacctgtat aaatcagcgt attatccagc gcggtacggt tataaatttc agcaccgttt
    22201 ttccgcacta tcagacggca tgatgaataa atgtcattat gctctctctc atgtctggca
    22261 ccgctgaatg ccaccgccgg aatgacaatt tgccggtcaa aaggctgatc gtcataaacc
    22321 ctgacggtga tggtccctga tggccaccgt tccggtgcac gggagtcccg ggggaaagct
    22381 ttgcccactg ttttaacgag atcgccttca atctggttgg cggacaattt tcccagaacc
    22441 cgacagttct cgttaatcgt gacgttgttg agcgtcccgg agttcgcatt cacgttaccg
    22501 ctgatatcgg catttttagc agtcagcttt ccgtccggtg tcagggaaaa ggccggggga
    22561 ttgccgccgc tggtaatggt gggggccgtc aggcgcttca ggaacacgtc gttcatgaat
    22621 atctgatcgc cctgaccaac aaacatcggt tttgtgttac cattcgcagg attaaccatc
    22681 gcaatcctgt ccgccgccag cagcacctga ctctgcatgc cgtcaggggt gttctcaata
    22741 ccggcaccaa tacccgcgat ataaaggcgt ccgtcctgca tctgctgcag cttcacagcc
    22801 cacatgctgt tcagattatt atttgtatca acctgaacct tctgtatctg ctgaattgcc
    22861 gcactctggt cttccagttt cttattgacg gtctgtgtga tttcattgct gacatccgta
    22921 atggacgtcc tgatttcagc cagatcaggc gccagctgac cgttatcaat ctgcgtccac
    22981 agctcctgag ccagatgggt ttttcctatc tcgcctttga aaaaatccag atagccggat
    23041 gcatcatcac tcggctgacc aacagcctcc acgaatgccg atttgccaac ggtgttcaca
    23101 ctgcggatat aaaagtaata atcatggccc ggtttgatat tgatactggc ggctatccag
    23161 tacagcgccg tgccaagata gcgggctgtg gtttctacct gcctgatatc ggtaatccgc
    23221 ttttccgaga accagaactc aaactgtacc gtcgggtcat aaacggcaag atgcggcgtg
    23281 gcggttatct gaaaatagcc cggtgtcagc tcaatccgcg acggcactgc aggtgcggca
    23341 atccggaacg ataccgatgc cggatcgccc tgctgccccc acgcatttac cgcccggact
    23401 gtcagcctgt agttccccag cgccagttgc gtgaagcggt atgtggtttc cgccgtccgg
    23461 gccgtgctga ccagccgctc actgccgtca tccgctgcca cggtcaggcg aagcaggaaa
    23521 ctcacgccct tcaccacctt cggcgtgtcc cagcgggcca gtacctgata ctccccgctg
    23581 tctgcggtga cttcggcagt caggtgctgc accgctggcg gcgtgacacc attcaccgtg
    23641 ccgctctggt cgccgtcaaa gtgcgccccg ttatccacga tggcctcttt ttccggtaca
    23701 tgctgcacgg cggtgatggc atacgtgccg tcgtcgttct cacggatact cacgcagcgg
    23761 aacaggcgct ggcgcaacgt cggcagcttc agcccccata cgctgtattc agcaacgccg
    23821 tcaggaacac ggctcacttt caccttcacg ccgtcggtga cggactgaac ctccacgctg
    23881 accggattac cacttccgtc aaccaggctt atcagcgtgg taccggagga tggcagcgtg
    23941 atttcacggt cgagcgtcag cgtccgggtc tggctgttta ccgccagcac gcgtccgccg
    24001 gtgcggatac cggcatagtc atcatcgcag atttcaatga catcgcccgg tacatggcga
    24061 agcccttcgg cacccacgct gaagtccacg gtctgcgttt ccagcagttc tgttttaatc
    24121 agccacagcc cggcgcggtg tgcctgcccc cggctggtac agccaaaagc atccatcttc
    24181 gtgacgttac gaccgtaacg ggcaatggcc tgcgtgtcct ccacaagctc tgtcgccgtc
    24241 tcccagccgt tattcgggtc aatccagttc acctcaacgg cattatggcg gtccttcagg
    24301 gcgctgaagc tgtagcggaa cggcgcacca tcatccggca tcaccacatt actgcggtta
    24361 taggtccaca ccttatccga cggtcggtcc tgcacgaacg tcagcgtctg cccgttccat
    24421 accggcatac agcgcatcgc agagcagaaa tcactgagca catcccacgc cttgcgctgt
    24481 gtggtcaggt acgcattaca ggtgatgcgc ggctccgtgc cgccaaaacc gtccggcacc
    24541 gactgatcgc aatgctggcc gatg
//
LOCUS       DAPGWB010000064        24460 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.064, whole genome shotgun sequence.
ACCESSION   DAPGWB010000064 DAPGWB010000000
VERSION     DAPGWB010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 24460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24460
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.064"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            397..1536
                     /gene="wza"
                     /locus_tag="RHX79_002446"
     CDS             397..1536
                     /gene="wza"
                     /locus_tag="RHX79_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein Wza"
                     /protein_id="HDV2197602.1"
                     /translation="MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADF
                     DLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPE
                     LTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQ
                     VDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHN
                     GREERISLQALMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGM
                     TLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEF
                     RLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW"
     gene            1542..1985
                     /gene="wzb"
                     /locus_tag="RHX79_002447"
     CDS             1542..1985
                     /gene="wzb"
                     /locus_tag="RHX79_002447"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase Wzb"
                     /protein_id="HDV2197603.1"
                     /translation="MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKG
                     ADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVM
                     LFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV"
     gene            1988..4150
                     /gene="wzc"
                     /locus_tag="RHX79_002448"
     CDS             1988..4150
                     /gene="wzc"
                     /locus_tag="RHX79_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase Wzc"
                     /protein_id="HDV2197604.1"
                     /translation="MTEKVKQHAAPVTGSDEIDIGRLVGTVIEARWWVIGITAVFALC
                     AVVYTFFATPIYSADALVQIEQNSGNSLVQDIGSALANKPPASDAEIQLIRSRLVLGK
                     TVDDLDLDIAVSKNTFPIFGAGWDRLMGRQNETVKVTTFNRPKEMADQVFTLNVLDDK
                     NYTLSSDGGFSARGQAGQMLKKEGVTLMVEAIHARPGSEFTVIKYSTLGMINQLQNSL
                     TVTENGKDAGVLSLTYTGEDREQIRDILNSIARNYQEQNIERKSAEASKSLAFLAQQL
                     PEVRSRLDVAENKLNAFRQDKDSVDLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLY
                     TKVHPAYRTLLEKRQALEDEKAKLNGRVTAMPKTQQEIVRLTRDVESGQQVYMQLLNK
                     EQELKITEASTVGDVRIVDPAITQPGVLKPKKGLIILGAIILGLMLSIVGVLLRSLFN
                     RGIESPQVLEEHGISVYASIPLSEWQKARDSVKTIKGIKRYKQSQLLAVGNPTDLAIE
                     AIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMR
                     KGYTHELLGTNNVNGLSEILIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLMSER
                     FAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSR
                     FEQNGIPVKGVILNSIFRRASAYQDYGYYEYEYKSDAK"
     gene            4243..5082
                     /gene="wcaA"
                     /locus_tag="RHX79_002449"
     CDS             4243..5082
                     /gene="wcaA"
                     /locus_tag="RHX79_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaA"
                     /protein_id="HDV2197605.1"
                     /translation="MKDNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCS
                     TSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNR
                     LSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQV
                     FTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSP
                     KKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGI
                     RGR"
     gene            5085..5573
                     /gene="wcaB"
                     /locus_tag="RHX79_002450"
     CDS             5085..5573
                     /gene="wcaB"
                     /locus_tag="RHX79_002450"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaB"
                     /protein_id="HDV2197606.1"
                     /translation="MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNIWAAPL
                     LVLYRIITECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRG
                     ADNMACPHIGNGVELGANVIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKV
                     IK"
     gene            5570..6787
                     /gene="wcaC"
                     /locus_tag="RHX79_002451"
     CDS             5570..6787
                     /gene="wcaC"
                     /locus_tag="RHX79_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaC"
                     /protein_id="HDV2197607.1"
                     /translation="MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGK
                     ESVSHQNYPQVIKHTPRMTAMANIVLFRLFNRDLFGNFNELYRTITRTPGPVVLHFHV
                     LHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
                     TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIIN
                     NGIDMVTEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHT
                     FGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVI
                     ATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQ
                     QMLEEYVNFYQNL"
     gene            6762..7979
                     /gene="wcaD"
                     /locus_tag="RHX79_002452"
     CDS             6762..7979
                     /gene="wcaD"
                     /locus_tag="RHX79_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative colanic acid polymerase WcaD"
                     /protein_id="HDV2197608.1"
                     /translation="MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLL
                     LFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIR
                     FKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVL
                     NFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGV
                     MTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGS
                     SSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIY
                     FSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIV
                     CPFILRKALNITR"
     gene            7990..8736
                     /gene="wcaE"
                     /locus_tag="RHX79_002453"
     CDS             7990..8736
                     /gene="wcaE"
                     /locus_tag="RHX79_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaE"
                     /protein_id="HDV2197609.1"
                     /translation="MLLSIITVAFRNLEGIVKTHASLAHLAQAEDISFEWIVVDGGSN
                     DGTREYLENLNGIYNLRFVSEPDNGIYDAMNKGITMAQGKFALFLNSGDIFHQNAANF
                     VRKLKMQKDNVMITGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKW
                     RYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQ
                     ILHVPGFWAELSWHLRQRTTSKTKALYNKV"
     gene            8752..9300
                     /gene="wcaF"
                     /locus_tag="RHX79_002454"
     CDS             8752..9300
                     /gene="wcaF"
                     /locus_tag="RHX79_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaF"
                     /protein_id="HDV2197610.1"
                     /translation="MQDLSGFSVPKGFRGGNAIKVQLWWAVQATIFAWSPQVLYRWRA
                     FLLRLFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQ
                     KSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKS
                     LPANVVCRGNPAVVIRERVETE"
     gene            9326..10447
                     /gene="gmd"
                     /locus_tag="RHX79_002455"
     CDS             9326..10447
                     /gene="gmd"
                     /locus_tag="RHX79_002455"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HDV2197611.1"
                     /translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV
                     DHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYT
                     ADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
                     KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL
                     GNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF
                     EGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWK
                     PEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES"
     gene            10450..11415
                     /gene="fcl"
                     /locus_tag="RHX79_002456"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
     CDS             10450..11415
                     /gene="fcl"
                     /locus_tag="RHX79_002456"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
                     /EC_number="1.1.1.271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HDV2197612.1"
                     /translation="MSKQRVFIAGHRGMVGSAIKRQLEQRGDVELVLRTRDELNLLDS
                     RAVHDFFASESIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL
                     LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS
                     VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMA
                     AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVDYKGRVVFDASK
                     PDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENRDRFRG"
     gene            11418..11897
                     /gene="gmm"
                     /locus_tag="RHX79_002457"
                     /gene_synonym="nudD"
                     /gene_synonym="wcaH"
                     /gene_synonym="yefC"
     CDS             11418..11897
                     /gene="gmm"
                     /locus_tag="RHX79_002457"
                     /gene_synonym="nudD"
                     /gene_synonym="wcaH"
                     /gene_synonym="yefC"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose mannosyl hydrolase"
                     /protein_id="HDV2197613.1"
                     /translation="MFLRQEDFATVVRSTPLVSLDFIAENSRGEFLLGKRTNRPAQGY
                     WFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHY
                     VVLGFRFRVAEEDLILPDEQHDDYRWLTPDALLASNDVHANSRAYFLAEKRAGVPGL"
     gene            11894..13117
                     /gene="wcaI"
                     /locus_tag="RHX79_002458"
     CDS             11894..13117
                     /gene="wcaI"
                     /locus_tag="RHX79_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis fucosyltransferase
                     WcaI"
                     /protein_id="HDV2197614.1"
                     /translation="MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYY
                     PQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQR
                     RWKPDRIIGVVPTLFCTPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVA
                     QLATAFERSGLHNVDNVSTISRSMMNKAIEKGVAAENVIFFPNWSEIARFQHVADADV
                     DALRNQLGLPDNKKIILYSGNIGEKQGLENVIEAADRLRDEPLIFAIVGQGGGKARLE
                     KMAQQRGLRNMQFFPLQSYDTLPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGN
                     AVITAEAHTELGQLCETFPGIAVCVEPESVEALVAGIRQALLLPKHNTVAREYAERTL
                     DKENVLRQFINDIRG"
     gene            13120..14556
                     /gene="cpsB"
                     /locus_tag="RHX79_002459"
     CDS             13120..14556
                     /gene="cpsB"
                     /locus_tag="RHX79_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate guanyltransferase"
                     /protein_id="HDV2197615.1"
                     /translation="MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTT
                     ICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA
                     KRHSPEIDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGY
                     IRRGEVSAGEQDTVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELK
                     KYRPDILDACEQAMSAVDPDLDFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAG
                     WSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTK
                     DAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITV
                     KPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKI
                     PLDLIEVRSGSYLEEDDVVRFADRYGRV"
     gene            14749..16119
                     /gene="cpsG"
                     /locus_tag="RHX79_002460"
                     /gene_synonym="manB"
     CDS             14749..16119
                     /gene="cpsG"
                     /locus_tag="RHX79_002460"
                     /gene_synonym="manB"
                     /EC_number="5.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis phosphomannomutase
                     CpsG"
                     /protein_id="HDV2197616.1"
                     /translation="MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLG
                     GDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPM
                     DYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLF
                     GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPNGNFPNGIP
                     NPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLE
                     KNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHY
                     FRDFAYCDSGMIPWLLVAELVCLKDKTLGELVRDRMAAFPASGEINSKLAQPVEAINR
                     VEQHFSREALAVDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDVPLMEARTLTL
                     LALLNE"
     gene            16174..17568
                     /gene="wcaJ"
                     /locus_tag="RHX79_002461"
     CDS             16174..17568
                     /gene="wcaJ"
                     /locus_tag="RHX79_002461"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HDV2197617.1"
                     /translation="MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSF
                     LYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFN
                     NDFDTQLKIWLAWYGLTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLM
                     ESFRNQPWLGFEVVGIYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGA
                     RVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRA
                     EDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVME
                     NDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYR
                     QLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIV
                     FLTVFKGFVNKAAY"
     gene            17570..19048
                     /gene="wzxC"
                     /locus_tag="RHX79_002462"
     CDS             17570..19048
                     /gene="wzxC"
                     /locus_tag="RHX79_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid undecaprenyl disphosphate flippase
                     WzxC"
                     /protein_id="HDV2197618.1"
                     /translation="MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLL
                     TVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGIVVCVAVFLLSDLI
                     GDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTFTV
                     VSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTA
                     DSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQ
                     DDTEKLRVNFYKLLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCIVG
                     LLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQI
                     INTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLA
                     VQIAAGVLAFVVMIVLSRHPLMVEVKRQFCRSEKMKMLLRAG"
     gene            19324..20604
                     /gene="wcaK"
                     /locus_tag="RHX79_002463"
     CDS             19324..20604
                     /gene="wcaK"
                     /locus_tag="RHX79_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis pyruvyl transferase
                     WcaK"
                     /protein_id="HDV2197619.1"
                     /translation="MKLLILGNHTCGNRGDSAILRGLLDAINILNPQAEVDVMSRYPV
                     SSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNI
                     AIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP
                     FQDEQFNQLANYVFGHCNALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDF
                     TASYAVQHWLDVAAQQKTVAITLREVAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQV
                     IALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACKLTVGT
                     RLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ
                     LPALNARLNEAVSRERQTGMQMVQSVLERIGEAK"
     gene            20601..21821
                     /gene="wcaL"
                     /locus_tag="RHX79_002464"
     CDS             20601..21821
                     /gene="wcaL"
                     /locus_tag="RHX79_002464"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HDV2197620.1"
                     /translation="MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEIVALQKGDTQN
                     THAAWTKYNLAARTRWLQDEPTGKVAKLRHRASQTLRGIHRKNTWQALNLKRYGAESR
                     NLILSAICGQVATPFYADVFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREV
                     LNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKA
                     PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQ
                     LEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVST
                     LHSGIPELVEADKSGWLVPENDARALAQRLAAFRQLDTDELAPVIKRAREKVEHDFNQ
                     QVINRELASLLQAL"
     gene            21832..23226
                     /gene="wcaM"
                     /locus_tag="RHX79_002465"
     CDS             21832..23226
                     /gene="wcaM"
                     /locus_tag="RHX79_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis protein WcaM"
                     /protein_id="HDV2197621.1"
                     /translation="MPFKTLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHD
                     WIASFKQAFSEGQTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGS
                     QVTGGEGGSMHNITLDVRGSDCTIKGLTMSGFGPVTQIYIGGKNKRVMRNLTIDNLTV
                     SHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDSDILISDHIIERINCT
                     NDKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIK
                     ARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNF
                     RVNNIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHLFMRNIKV
                     MQKSSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNERGQSSVDIDRINHHIV
                     NVEKINFRLPERRE"
     gene            23401..24294
                     /gene="galF"
                     /locus_tag="RHX79_002466"
     CDS             23401..24294
                     /gene="galF"
                     /locus_tag="RHX79_002466"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalF"
                     /protein_id="HDV2197622.1"
                     /translation="MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEI
                     VAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNV
                     RQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS
                     QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVQFIEKPDQPQTLDSDIMAVGRYVLS
                     ADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKY
                     GLRNLKEGAKFRELIIKSLQE"
BASE COUNT         5991 a         6109 c         6655 g         5705 t
ORIGIN      
        1 ccaattgccg aattgttacc ttgcctgcta ttccgttagc tgtaacactt cctcctgcat
       61 tattggagag ccaatattca attaccataa tgtcacctta tattcggaag ttaatttccg
      121 caataaccct ttctcatcaa cgattgtatg cggagagggt ttgaaaaatt aagctaaatc
      181 agtgtattgg tagctaaaaa gccaggggcg gtagcgtgtc tggatgcctg aaagaccagt
      241 ctgaattatt ctgtcaatag cctgcggatg aaatcaattt ttttaggact gatgccagtt
      301 aaatttttat tcaattaact gcaaggtaaa tgtgcatggc gacattgcta ttaatagtgc
      361 acaggataat tactctgcca aagtgataaa taaacaatga tgaaatccaa aatgaaattg
      421 atgccattat tggtgtcagt aaccttgata agcggttgca cagtacttcc gggcagcaat
      481 atgtcgacga tgggcaaaga cgtcatcaaa cagcaggacg ctgatttcga tctcgacaaa
      541 atggtgaatg tttatccgct gaccccgcgc ctgattgacc aattacgccc acgcccaaat
      601 gtagcgcgcc ccaatatgac gctggaaagt gagatcgcga attaccagta tcgcgtcggg
      661 ccgggggacg ttcttaatgt caccgtctgg gatcacccgg aactcaccac gccagctggt
      721 cagtaccgca gctccagcga caccggcaac tgggtacagc ctgacggcac tatgttttac
      781 ccgtatatcg gcaaggttca cgtagtcggg aaaacgctcg ctgaaattcg cagtgatatt
      841 accgggcgct tagcgacgta catcgctgac ccgcaggtgg acgttaatat cgccgccttc
      901 cgctcacaaa aggcctatat ctccggacag gtgaataaat ccggtcaaca ggcgatcacc
      961 aacgtgccac tgaccattct cgacgccatt aacgccgcag gtggcctgac cgacaccgct
     1021 gactggcgca acgtggtgct aacacacaat ggtcgtgaag aacgcatttc tttgcaggcg
     1081 ctgatgcaaa acggcgacct caatcagaac cgactgcttt atcccggcga tattctctac
     1141 gtgccgcgta atgatgatct gaaagtattt gtgatgggtg aagtgaagaa acagagcacc
     1201 ctgaaaatgg actttagcgg catgaccctg actgaagctc tgggcaatgc cgaaggtatc
     1261 gacatgacca cctccaacgc cagcggcatc tttgtcattc gtccgctgaa aggcgagggc
     1321 gggcgtaacg gcaagattgc caatatctac cagctggata tgtccgatgc cacgtcgctg
     1381 gtgatggcga cagaattccg cttgcaacct tatgacgtgg tgtatgtcac caccgccccg
     1441 gtttcccgct ggaaccgtct gatcaatcag ttgctgccaa ctattagcgg tgtccgttac
     1501 atgacggata cagccagcga cattcataac tggtaatcgt catgtttaac aacatcttag
     1561 ttgtctgtgt cggcaatatt tgccgttccc cgacggcgga acgcttactg caacgttatc
     1621 acccggagct gaaagtggag tccgctggac tcggcgcgct ggtcggtaag ggcgctgacc
     1681 ctactgctat cagcgtcgcc gcagaacatc aactgtctct ggaaggtcac tgtgcccgtc
     1741 aaatcagccg ccgcctgtgt cgcaactacg acctgatttt gaccatggaa aagcgccata
     1801 tcgaacgctt atgcgagatg gcacccgaga tgcgcggcaa agtgatgcta tttggtcact
     1861 gggataacga atgtgaaatc cccgacccgt atcgcaaaag ccgggaaacg tttgcagcgg
     1921 tgtacacatt acttgaacgg tctgcccgcc agtgggcgca ggcattgaac gcagagcagg
     1981 tataagaatg acagaaaaag taaaacaaca tgccgctccg gtaacgggca gtgatgaaat
     2041 cgatattggt cgcctggtcg gcaccgtcat tgaagcgcgc tggtgggtga ttggcatcac
     2101 cgctgtattt gccctctgtg ccgtggttta cactttcttc gccacgccga tttatagtgc
     2161 cgacgcactg gtacaaatcg agcaaaacag cggcaattcg ttagtgcagg acattggttc
     2221 ggcattagcc aacaaaccgc ctgcatcgga cgccgagatc cagttgattc gttcgcgcct
     2281 ggtgcttggt aaaacggtgg acgatctcga cctcgatatt gcggtgagca aaaacacgtt
     2341 cccgattttc ggggcgggct gggatcgcct gatggggcgt cagaacgaga cggtgaaagt
     2401 gactaccttt aaccgcccga aagagatggc ggatcaggtg tttacgctta atgtgctgga
     2461 tgacaaaaac tacaccctga gcagtgatgg cggctttagc gcccgtgggc aagcgggcca
     2521 gatgctgaaa aaagaaggcg tcacgctgat ggttgaagcc attcacgccc gcccgggcag
     2581 tgagtttacc gtcatcaaat actccacgct ggggatgatc aatcaactgc aaaacagcct
     2641 gacggtaacg gagaacggca aagacgcagg cgtactgagc ctgacttata ccggtgaaga
     2701 tcgtgaacag atccgcgaca ttcttaacag catcgcccgt aactatcagg aacaaaatat
     2761 tgagcgcaaa tcggcggaag cgtcgaaaag cctcgctttc ctcgcgcaac agttaccgga
     2821 agtacgtagc cgcctcgatg ttgccgaaaa caaactgaat gccttccgtc aggataaaga
     2881 ttctgttgat ctgccgctgg aagcgaaagc ggtgctcgat tcgatggtga acatcgacgc
     2941 ccagttgaac gaactgacct ttaaagaggc ggaaatctcc aagctgtaca ccaaagttca
     3001 cccggcgtac cgcacgctgc tggagaaacg tcaggcgctg gaagacgaaa aagccaaact
     3061 taacggtcgc gtaacggcga tgccgaaaac ccagcaggag attgtccgtc tgacccgcga
     3121 tgtcgagtct ggtcagcagg tctatatgca actgctgaat aaagagcagg agctgaaaat
     3181 caccgaagcc agcaccgtcg gcgatgtgcg cattgttgac ccggcaatca cccagccagg
     3241 tgtactgaaa ccgaagaaag ggctgattat ccttggggcg attattcttg gcctgatgct
     3301 ctctatcgtg ggtgtgctgc tgcgctcgtt gtttaatcgc ggcatcgaaa gcccgcaggt
     3361 gctggaagaa cacggtatca gcgtctatgc cagcatcccg ttgtcggaat ggcagaaagc
     3421 gcgcgatagc gtcaaaacca tcaaagggat taaacgctat aaacagagcc agctactggc
     3481 ggtggggaat ccaaccgatc tggcgattga agccatccgc agtctgcgta ccagtctgca
     3541 cttcgcgatg atgcaggcgc agaacaatgt gttgatgatg accggggtta gcccgtcaat
     3601 cggtaaaacc tttgtctgcg ccaacctggc ggcggtgatc agccagacca ataaacgtgt
     3661 gttgttgatc gactgcgata tgcgcaaagg ctacacccac gagctgttgg gcaccaataa
     3721 cgtcaatggc ctgtcggaaa ttctgattgg tcagggcgat attactaccg cagctaaacc
     3781 gacctctatt gccaaatttg acctgatccc gcgcggtcag gtgccgccaa atccttctga
     3841 actgttgatg agcgaacgct ttgccgaact ggtgaactgg gcgagtaaaa actatgacct
     3901 ggtgttgatt gatacgccgc cgattctggc agtgaccgat gcggcaattg ttggtcgtca
     3961 tgtcggaacc acattaatgg tggcgcgtta tgcggtcaac acattgaaag aagtggaaac
     4021 cagtctgagc cgctttgagc aaaacggtat tccggtgaaa ggggtgattc tgaactccat
     4081 cttccgccgc gccagcgcgt atcaggatta tggctattac gaatacgaat ataagtcgga
     4141 tgcgaaataa cgacgcctgc attcgcaccg ccccgtaggc cggataaggc gttcacgccg
     4201 catccggcaa gcaaaccagc tcataagccg ggagaacaac ctatgaaaga caatccgctg
     4261 atctcaatct atatgccgac ctggaaccgc caacaactgg cgattcgggc aataaaatcg
     4321 gttttgcgcc aggactacag caactgggag atgatcatcg tggatgattg ctccacctcc
     4381 tgggaacaac tgcaacagta cgtcaccgcc ctcaacgatc cgcgtatcac ttacattcac
     4441 aacgacatta acagcggggc gtgcgcggta cgtaaccagg cgattatgct ggcgcaaggg
     4501 gaatatatca ccgggattga tgacgatgac gaatggacac ccaaccgtct gagcgtcttc
     4561 ctcgcccata aacagcaact ggtcacacac gcctttttgt acgctaacga ctacgtttgc
     4621 cagggcgaag tctattccca accggcaagc ttgccgctgt atcccaaatc gccgtattca
     4681 cgccgcctgt tctacaaacg caatatcatt ggcaaccagg tctttacctg ggcatggcgt
     4741 ttcaaagagt gtttgttcga taccgaactg aaagcggcac aggattacga catcttcctg
     4801 cggatggtgg tggagtatgg cgaaccgtgg aaagtggaag aggcgacgca gatcctgcat
     4861 atcaatcacg gtgaaatgca gatcacctcg tcaccgaaaa aattctccgg atacttccac
     4921 ttttaccgca agcacaaaga caaattcgac cgcgccagca aaaaatatca gctgtttacc
     4981 ctctaccaga tccgcaataa acgtatgacc tggcgcactt tgctgacgct gctgtcggtg
     5041 cgtaacggca aacgtctggc tgatggtatt cgggggcgct aaagatgctg gaagatctgc
     5101 gcgccaacag ctggagttta cgtccgtgct gcatggttct agcctatcgc gtcgctcatt
     5161 tttgttcggt gtggcgcaaa aagaacgtcc tcaacaatat ttgggcggcc cctctgctgg
     5221 tgctgtatcg cattatcacc gaatgctttt tcggttatga aatccaggct gccgcgacca
     5281 ttggccgccg ctttactatc catcacggtt acgccgtagt gatcaataaa aacgtggtgg
     5341 cgggggatga tttcaccatt cgccacggcg tcactatcgg caatcgtggt gccgataaca
     5401 tggcatgtcc acatattggc aacggcgtcg aactcggtgc caacgttatt attcttggtg
     5461 atatcacgct tggtaacaac gtcaccgtgg gtgcgggcag cgtggtgctc gactctgtcc
     5521 cggacaacgc gctggtggtg ggagaaaaag cgcgagtgaa ggtaattaaa tgaatatttt
     5581 gcaatttaat gtgcgactgg cggaaggcgg ggcagcaggt gtggcgttag atctccacca
     5641 gcgtgcgctg caacaggggc tagcgtcaca ttttgtctac ggttacggca aaggcggcaa
     5701 agagagcgtc agccatcaaa actatccgca ggtcatcaaa catacgccgc ggatgactgc
     5761 aatggcgaat attgtcctgt ttcgtctgtt taatcgcgat ctgtttggca atttcaatga
     5821 gttatatcgc accattactc gtacaccggg tccggtggtc ctgcattttc atgtgctgca
     5881 cagctactgg ctaaatctta agagcgtggt gcgcttttgc gaaaaggtga aaaaccataa
     5941 accggacgtc actctggtct ggacgctgca cgaccactgg agcgttaccg ggcgctgcgc
     6001 ctttaccgac ggttgtgaag gctggaaaac gggctgccag aaatgcccga ccttaaataa
     6061 ctatccgccg gtgaagattg atcgggcaca ccagctggtg gcgggcaaac gccagttatt
     6121 ccgcgagatg ctggcactgg gctgtcagtt tatttccccc agccagcatg tggctgacgc
     6181 tttcaatagt ctgtacgggc cagggcgttg ccggattatc aataatggta ttgatatggt
     6241 aaccgaagcg attctggcgg acttgcctcc ggtgcgcgaa acccagggca agccgaaaat
     6301 cgcggtggtg gcgcatgacc tgcgttacga cggcaagact aaccagcaac tggtgcgtga
     6361 gatgatggcg ctgggcgaca aaatcgaact gcataccttt ggtaagttct cgccgttcac
     6421 cgctggcaac gtggttaatc acggctttga aactgacaag cgcaagttga tgagcgcgct
     6481 caatcagatg gatgcgctgg tgttcagttc tcgcgtcgat aactacccgc tgattttgtg
     6541 tgaggcgcta tcgattggcg tgccggtgat cgccacccat agcgatgcgg cgcgggaagt
     6601 gctgcaaaaa tccggtggta aaaccgtcag tgaagaagag gtgctgcaac tggtgcagtt
     6661 aagcaaaccg gaaatcgcgc aggcgatatt tggtaccacg ctggctgagt tcagccaacg
     6721 cagccgcgcc gcctacagtg gacaacagat gctggaggag tatgtcaact tctatcagaa
     6781 tctgtagcta cctgctgctg ccgctgatct acctgctggt taacgtcaaa atcgcccagc
     6841 ttggtgaaag tttccccatc actatcgtca cttttttacc tgtcttgtta ctgctgtttt
     6901 tagaacgcat cagcgttaaa aaattgatga ttgccttagg gattggtgcg ggactcacgg
     6961 cgttcaacta tctgtttggt cagtcgttgg atgccagtaa atacgtcact tcaaccatgc
     7021 tgtttgtcta tattgtgatc attattggca tggtgtggag tattcgcttt aaaacgattt
     7081 cgccacacaa ccatcgcaag atattacgtt tcttttatct ggtggtcggg ctggtggtgg
     7141 cgctggcggc ggtggagatg gcgcaaatta tcctcaccgg cggcagcagt attatggagt
     7201 cgatttcgaa atatctgatt tacagcaaca gctatgtgct gaatttcatc aaattcggcg
     7261 gcaagcgcac gacagcactt tatttcgaac cggcattttt cgctctggca ttaatctcaa
     7321 tttggctcag catcaaacag tttggtatca aaacgcctaa aaccgatgct atgattctcg
     7381 cagggataat attatccgga tcgttttcag gggttatgac ctttatcctg ttttatttgc
     7441 tggagtgggc attccaatat ctgaataaag aggcgattaa gaaaaagtta ccgttagcat
     7501 tgatttctct ggctgtattc ctggttggtg tggtaatcgc gtttccttat atttccaccc
     7561 gtctgggcga tttaggtacg gaaggatcgt catcgtatta tcgtattgtc ggtccgctgg
     7621 tgatggtcgg ttattctttg acccatattg acggtgtagt cagatttggc tcactttatg
     7681 aatatgtcgc atcattcgga atatttaacg gtgcggatgt cggaaaaacc atagacaatg
     7741 ggttgtatct gctgattatt tatttttcct ggttcgcggt gtttttatcg ctgtggtaca
     7801 tggggaaagt gataaaaatg atgatcaacg cttttggtga taaccgcaat tttcgcgtgc
     7861 aattatatct ttttactccg gtatcgctgt tttttaccgg ttcgatattt agcccggaat
     7921 atgcattttt aatcgtctgt ccgtttattt tgcgaaaagc gttaaatatt acgaggtaag
     7981 aataagaaca tgttgcttag cataatcact gtcgcgtttc gtaacctcga agggatagtc
     8041 aaaacacatg cctcgctggc gcatctggcg caggcggaag atatcagctt cgaatggatt
     8101 gttgtcgatg gcggttccaa tgacggcacc cgtgagtatc tggaaaatct caatggtatc
     8161 tataacctac gctttgtcag cgagccagat aacggtatct atgacgccat gaacaaaggc
     8221 attacgatgg cacaaggcaa gttcgcgttg tttctcaatt cgggcgatat ttttcatcag
     8281 aatgccgcaa attttgtccg taagttaaaa atgcaaaaag ataacgtgat gatcaccggc
     8341 gatgcgctgc tggattttgg cgacgggcat aaaattaaac gtagcgccaa accgggctgg
     8401 tatatttatc acagcctgcc cgccagtcat caggcgatat ttttcccggt atccggcttg
     8461 aagaaatggc gttatgacct ggaatataaa gtttcttccg actacgcgct ggcagccaaa
     8521 atgtataaag ccggttatgc atttaaaaaa ctcaatggcc tggtgtctga attttccatg
     8581 ggtggggtat ctaccaccaa taatatggaa ttgtgtgctg atgcgaaaaa agtccaacga
     8641 caaatattac atgtacctgg cttttgggct gaattatcct ggcatttacg ccaacgtact
     8701 acctcaaaga cgaaagcctt atataacaaa gtctgaatat aagggaaaac gatgcaggat
     8761 ttaagtggat tctcggtgcc gaaagggttc cggggcggca acgctattaa agtgcaatta
     8821 tggtgggcag tacaggcaac aatatttgcc tggtcgccac aagtattgta tcgctggcgg
     8881 gcttttttat tacgtttatt cggagcaaaa ataggaaaaa acgtagttat tcgtccgtca
     8941 gtaaaaatta cctatccgtg gaaattaacc ttaggtgatt acgcgtgggt cggcgatgac
     9001 gtcaatttat ataccctcgg tgaaataacc attggcgcac attcggtgat atcgcaaaaa
     9061 agttatttat gcaccggtag ccacgaccat gcaagtcaac atttcaccat taacgccacg
     9121 cctattgtga ttggcgagaa atgctggctg gcaaccgatg tctttgttgc cccaggcgtc
     9181 acaatcggcg acggcaccgt cgtgggtgca cgaagcagtg tttttaaatc gcttccggca
     9241 aatgtggttt gccgggggaa tcccgcagtg gtgatacgcg aacgcgttga aactgaataa
     9301 attcaaaaat acagaggaat aagacatgtc aaaagtcgct ctcatcaccg gtgtaaccgg
     9361 acaagacggt tcttacctgg cagagtttct gctggaaaaa ggttacgagg tgcatggtat
     9421 taagcgtcgc gcatcgtcat tcaacaccga gcgcgtggat cacatttatc aggatccgca
     9481 cacctgcaac ccgaaattcc atctgcatta tggcgacctg agtgatacct ctaacctgac
     9541 gcgcattttg cgtgaagtac agccggatga agtgtacaac ctgggcgcaa tgagccacgt
     9601 tgcggtctct tttgagtcac cagaatatac cgctgacgtc gacgcgatgg gtacgctgcg
     9661 cctgctggag gcgatccgct tcctcggtct ggaaaagaaa actcgtttct atcaggcttc
     9721 cacctctgaa ctgtacggtc tggtgcagga aattccgcag aaagaaacca cgccgttcta
     9781 cccgcgatct ccgtatgcgg tcgccaaact gtacgcctac tggatcaccg ttaactaccg
     9841 cgaatcctac ggcatgtacg cctgtaacgg tattctcttc aaccatgaat ccccgcgccg
     9901 cggcgaaacc ttcgttaccc gcaaaattac ccgcgcaatc gccaacatcg cccaggggct
     9961 ggagtcgtgc ctgtacctcg gcaatatgga ctccctgcgt gactggggcc atgccaaaga
    10021 ctacgtaaaa atgcagtgga tgatgctgca acaggaacaa ccggaagatt ttgttatcgc
    10081 gaccggcgtt cagtactccg tacgtcagtt cgtggaaatg gcggcagcac agttgggcat
    10141 caaactgcgc tttgaaggca cgggtgttga agagaagggc attgtggttt ccgtcaccgg
    10201 gcatgacgcg ccgggcgtta aaccgggtga tgtgattatc gctgttgacc cgcgttactt
    10261 ccgtccggct gaagttgaaa cgctgctcgg cgacccgacc aaagcgcacg aaaaactggg
    10321 ctggaaaccg gaaatcaccc tcagagagat ggtgtctgaa atggtggcta atgacctcga
    10381 agcggcgaaa aaacactctc tgctgaaatc tcacggctac gacgtggcga tcgcgctgga
    10441 gtcataagca tgagtaaaca acgagttttt attgctggtc atcgcgggat ggtcggttcc
    10501 gccatcaagc gacagctcga acagcgcggt gatgtggagc tggtattacg cacccgcgat
    10561 gaactgaacc tgctggacag ccgcgcggtg catgatttct ttgccagcga aagcattgac
    10621 caggtctatc tggcggcggc gaaagtgggc ggcattgttg ccaacaacac gtatccggcg
    10681 gatttcatct accagaacat gatgattgag agcaacatca ttcacgccgc gcatcagaac
    10741 gacgtgaaca aactgctgtt tctcggatcg tcctgtatct acccgaaact ggcaaaacag
    10801 ccgatggcag aaagcgagtt attgcagggc acgctggagc cgaccaacga gccttatgcc
    10861 attgccaaaa ttgccgggat caaactgtgc gaatcttaca accgccagta cggacgcgat
    10921 taccgctcag tcatgccgac caacctgtat ggcccgcatg acaacttcca cccgagtaat
    10981 tcgcatgtga tcccagcatt gttgcgtcgc ttccacgagg cgacggcaca gaatgcgccg
    11041 gacgttgtgg tatggggcag cggtacaccg atgcgtgaat tcctgcacgt cgatgatatg
    11101 gcggcggcca gcattcacgt gatggagctg gcgcacgaag tctggctgga gaacacccag
    11161 ccgatgctgt cgcacattaa cgtcggtacc ggtgttgact gcactatccg cgagctggcg
    11221 caaaccatcg ccaaagtggt ggattacaaa ggtcgggtgg tttttgatgc cagcaagccg
    11281 gatggtacgc cgcgcaaact gctggatgtg acgcgcctgc atcagcttgg ctggtatcac
    11341 gaaatctcac tggaagcggg gcttgccagc acttaccagt ggttccttga gaatcgagac
    11401 cgctttcggg ggtaatgatg tttttacgtc aggaagactt tgccacggta gtgcgctcca
    11461 caccgcttgt ctctctcgac tttattgccg agaacagtcg cggcgagttt ctgcttggca
    11521 aaagaaccaa ccgcccggcg cagggttact ggtttgtgcc gggagggcgc gtgcagaaag
    11581 acgaaacgct ggaagccgca tttgagcggc tgacgatggc ggaactgggg ctgcgtctgc
    11641 cgataacagc aggccagttt tacggtgtct ggcagcactt ttatgacgat aacttctctg
    11701 gcacggattt caccactcac tatgtggtgc tcggttttcg cttcagagtc gctgaagaag
    11761 atctgatact gccggatgag cagcatgacg attaccgctg gctgacgccg gacgcgctgc
    11821 tcgccagtaa cgatgttcac gctaacagcc gcgcctattt tctcgctgag aagcgtgccg
    11881 gagtacccgg attatgaaaa tactggtcta cggcattaac tactcgccgg agttaaccgg
    11941 tatcggcaaa tacaccggcg agatggtgga atggctggcg gcgcaaggtc atgaggtgcg
    12001 ggttattacc gcaccgcctt actacccgca gtggcaggtg ggcgagaact attccgcctg
    12061 gcgctacaaa cgagaagagg gggccgccac ggtgtggcgc tgcccgctgt acgtgccaaa
    12121 acagccgagc accctgaaac gcttgttgca tctcggcagt tttgccgtca gcagtttctt
    12181 tccactgatg gcgcaacgtc gctggaagcc ggatcgcatt atcggcgtag tgccaacgct
    12241 gttttgcacg ccgggaatgc gcctgctggc gaagctctct ggtgcgcgta ccgtgctgca
    12301 tattcaggat tacgaagtgg acgccatgct ggggctgggc cttgccggaa aaggcaaagg
    12361 cggcaaagtg gcacagctgg caacggcgtt cgaacgtagc ggactgcata acgtcgataa
    12421 cgtctccacg atttcgcgtt caatgatgaa taaagccatc gaaaaaggcg tggcggcgga
    12481 aaacgtcatc ttcttcccca actggtcgga aattgcccgt tttcagcatg ttgcagatgc
    12541 cgatgttgac gcccttcgta accagcttgg cctgccggat aacaaaaaaa tcattcttta
    12601 ctccggcaat attggtgaaa agcaggggct ggaaaacgtt attgaagctg ccgatcgcct
    12661 gcgcgatgaa ccgctgattt ttgccattgt cgggcagggc ggcggcaaag cgcggctgga
    12721 aaaaatggcg caacagcgtg gtctgcgcaa catgcaattt tttccgctgc aatcgtatga
    12781 cactttgccc gcactgctga agatgggcga ttgccatctg gtggtgcaaa aacgcggcgc
    12841 ggcagatgcc gtattgccgt cgaaactgac caatattctg gcggtaggcg gtaacgcggt
    12901 gattaccgca gaagcccaca cagaactggg gcagctttgc gaaacctttc cgggcattgc
    12961 ggtttgcgtt gaaccggaat cggtcgaggc gctggtggcg gggattcgtc aggcgcttct
    13021 gttgcccaaa cacaacacgg tggcacgtga atatgccgaa cgcacgctcg ataaagagaa
    13081 cgtgttacgt caatttataa atgatattcg gggataatta tggcgcagtc gaaactctat
    13141 ccagttgtga tggcaggtgg ctccggtagc cgcttatggc cgctttcccg cgtactttac
    13201 cccaagcagt ttttatgcct gaaaggcgat ctcaccatgc tgcaaaccac catctgccgc
    13261 ctgaacggcg tggagtgcga aagcccggtg gtgatttgca atgagcagca ccgctttatt
    13321 gtcgcggaac agctgcgtca actgaacaaa ctcaccgaga acattattct cgaaccggca
    13381 gggcgtaaca ctgcacctgc cattgcgctg gcggcgctgg cggcaaaacg tcatagcccg
    13441 gagatcgacc cgttaatgct ggtattggcg gcggatcatg tgattgccga tgaagacgcg
    13501 ttccgtgccg ccgtgcgtaa tgccatgccg tatgccgaag cgggcaagct ggtgaccttc
    13561 ggcattgtgc cggatctacc tgaaaccgga tatggctata ttcgtcgcgg tgaagtatct
    13621 gcgggtgagc aggatacggt ggcctttgaa gtggcgcagt ttgtcgaaaa accgaatctg
    13681 gaaaccgccc aggcctatgt ggcaagcggc gaatattact ggaacagcgg catgttcctg
    13741 ttccgcgccg gacgctatct cgaagaactg aaaaaatatc gcccggatat tctcgacgcc
    13801 tgtgaacaag cgatgagcgc cgtcgatccg gatctcgatt ttattcgcgt ggatgaagaa
    13861 gcgtttctgg cctgcccgga agagtcggtg gattacgcgg tcatggaacg tacggcagat
    13921 gccgttgtgg tgccgatgga tgcgggctgg agcgatgtcg gttcctggtc ttcattatgg
    13981 gagatcagcg cccacaccgc cgagggcaac gtttgccacg gtgatgtgat taatcacaaa
    14041 actgaaaaca gctatgtgta cgccgaatct ggcctggtca ccaccgtcgg ggtgaaagat
    14101 ctggtagtgg tgcagaccaa agatgcggtg ctgattgccg accgtaacgc ggtgcaggat
    14161 gtgaaaaaag tggtcgagca gatcaaagcc gatggtcgcc atgagcatcg ggtgcatcgc
    14221 gaagtgtatc gtccgtgggg caaatatgac tctatcgacg cgggcgaccg ctaccaggtg
    14281 aaacgcatca ccgtgaaacc gggcgagggc ttgtcggtac agatgcacca tcaccgcgcg
    14341 gaacactggg tagtggtcgc gggaacggca aaagtcacca ttgatggtga tatcaaactg
    14401 cttggtgaaa acgagtccat ttatattccg ctgggggcga cgcactgcct ggaaaacccg
    14461 gggaaaattc cgctcgattt aattgaagtg cgctccggct cttatctcga agaggatgat
    14521 gtggtgcgct tcgcggatcg ctacggacgg gtgtaaacgt cgcatcagga gctgtttgtc
    14581 ggatgcggcg tgaacgcctt atccgaccta cggttcgggt ttgtagtcct gataagacgc
    14641 ggcagcgtcg catcaggcaa tgaatgcgaa accgagatgt aaataacgac aaaaacaaaa
    14701 ttggccgttt cggtcagggc caactattgc ctgaaaaagg gtaacgacat gaaaaaatta
    14761 acctgcttta aagcctatga tattcgcggg aaattaggcg aagaactgaa tgaagatatc
    14821 gcctggcgca ttggtcgcgc ctatggcgaa tttctcaaac cgaaaaccat tgtgttaggc
    14881 ggtgatgtcc gtctcaccag cgaaacctta aaactggcgc tggcaaaagg tttacaggat
    14941 gcgggcgttg acgtgctgga tattggtatg tccggcaccg aagagatcta tttcgccacg
    15001 ttccatctcg gcgtggatgg cggcattgaa gttaccgcca gccataatcc gatggattac
    15061 aacggcatga agctggtgcg cgagggggct cgcccgatca gcggtgatac cggactgcgc
    15121 gatgtccagc gcctggctga agccaacgac tttcctcccg tcgatgaaac caaacgcggt
    15181 cgctatcagc aaatcaacct gcgtgacgct tacgttgatc acctgttcgg ttatatcaat
    15241 gtcaaaaatc tcacgccgct caagctggtg atcaactccg ggaatggcgc agcgggtccg
    15301 gtggtggacg ccattgaagc ccgctttaaa gcccttggcg cacccgtgga attaatcaaa
    15361 gtgcacaaca cgccgaacgg caatttcccc aacggtattc ctaacccgct actgccggaa
    15421 tgccgcgacg acacccgcaa tgcggtcatc aaacacggcg cggatatggg cattgccttt
    15481 gatggcgatt ttgaccgctg cttcctgttt gacgaaaaag ggcagtttat cgaaggctac
    15541 tacattgtcg gcctgctggc agaagcgttc ctcgaaaaaa atcccggcgc gaagatcatc
    15601 cacgatccac gtctctcctg gaataccgtt gatgtggtga ctgccgctgg cggcacgccg
    15661 gtgatgtcga aaaccggaca cgcctttatt aaagaacgta tgcgcaagga agacgccatc
    15721 tacggtggcg aaatgagcgc ccaccattac ttccgtgatt tcgcttactg cgacagcggc
    15781 atgatcccgt ggctgctggt cgccgaacta gtgtgcctga aggataaaac gctgggcgaa
    15841 ctggtacgcg accggatggc ggcgtttccg gcaagcggtg agatcaacag caaactggcg
    15901 caacccgttg aggcgattaa ccgcgtggaa cagcatttta gccgtgaggc gctggcggtg
    15961 gatcgcaccg atggcatcag catgaccttt gccgactggc gctttaacct gcgctcctcc
    16021 aacaccgaac cggtggtgcg gttgaatgtg gaatcgcgcg gtgatgtgcc gctgatggaa
    16081 gcgcgaacgc taactctgct ggcgttgctg aacgagtaat gtcggatctt cccttacccc
    16141 attgcgggta aggggctaat aacaggaaca acgatgacaa atctaaaaaa gcgcgagcga
    16201 gcgaaaacca atgcatcgtt aatctctatg gtgcaacgct tttcagatat caccatcatg
    16261 tttgccggac tatggctggt ttgcgaagtg agcggactgt cattcctcta catgcacctg
    16321 ttggtggcgc tgattacgct ggtggtgttc cagatgctgg gcggcatcac cgatttttat
    16381 cgctcatggc gcggtgttcg ggcagcgaca gaatttgccc tgttgctaca aaactggacc
    16441 ttaagcgtga ttttcagcgc cggactggtg gcgttcaaca atgatttcga cacgcaactg
    16501 aaaatctggc tggcgtggta tgggctgacc agcatcggac tggtggtttg ccgttcatgt
    16561 attcgcattg gggcgggctg gctgcgtaat catggctata acaagcgcat ggtcgcggtg
    16621 gcgggggatt tagccgccgg acaaatgctg atggagagct tccgtaatca gccgtggtta
    16681 gggtttgaag tggtgggtat ataccacgac ccgaaaccgg gcggcgtttc taacgactgg
    16741 gcgggtaact tgcaacagct ggtcgaggat gcaaaagcgg gaaagattca taacgtctat
    16801 atcgcgatgc aaatgtgcga cggcgcgcga gtgaaaaaac tggtccatca attggcggac
    16861 accacctgtt cggtgctgct gatccccgat gtctttacct tcaacattct ccattcacgt
    16921 ctcgaagaga tgaacggcgt tccggtggtg ccgctttacg atacgccgct ttccggggtt
    16981 aaccgcctgc taaaacgtgc ggaagacatt gtgctggcga cgctgatctt gctgctgatc
    17041 tccccggtgc tgtgctgtat tgcgctggcg gtgaaactca gttcacctgg gccggttatt
    17101 ttccgccaga ctcgctatgg catggatggc aagccgatca aagtgtggaa gttccgttcc
    17161 atgaaagtga tggagaacga caaagtggtg actcaggcga cgcagaacga tccgcgcgtc
    17221 accaaagtgg ggaactttct gcgccgcacc tcgctggatg aactgccgca gtttatcaat
    17281 gtgctgaccg gggggatgtc gattgtcggt ccacgtccgc acgcagtagc gcataacgaa
    17341 cagtatcgcc agctcattga aggctacatg ctgcgccaca aagtgaaacc gggcattacc
    17401 ggctgggcgc agattaatgg ctggcgcggc gaaaccgaca cgctggagaa aatggaaaaa
    17461 cgcgtcgagt tcgaccttga gtacatccgc gaatggagcg tctggttcga tatcaaaatc
    17521 gtttttctga cggtgttcaa aggtttcgtt aacaaagcgg catattgata tgagcttacg
    17581 tgaaaaaacc atcagcggcg cgaagtggtc ggcgattgcc acggtgatca tcatcggcct
    17641 cgggctggtg cagatgaccg tgctggcgcg gattatcgac aaccaccagt tcggcctgct
    17701 gactgtgtcg ctggtgatta tcgcgctggc agatacgctt tctgacttcg gtatcgctaa
    17761 ctcgattatt cagcgaaaag aaatcagtca ccttgaactc accacgttgt actggctgaa
    17821 cgtcgggctg gggatcgtgg tgtgcgtggc ggtgtttttg ttgagtgatc tcatcggcga
    17881 cgtgctgaat aacccggacc tggcaccttt gattaaaaca ttgtcgctgg cgtttgtggt
    17941 aatcccccac gggcaacagt tccgcgcgtt gatgcagaag gagctggagt tcaacaaaat
    18001 cggcatgatc gaaaccagcg cggtgctggc gggcttcact tttacggtgg ttagcgccca
    18061 tttctggccg ctggcgatga ccgcgatcct cggttatctg gtcaatagtg cggtaagaac
    18121 gctgctgttt ggctactttg gtcgaaaaat ttatcgcccc ggtctgcatt tctcgctggc
    18181 gtcagttgcg ccgaacttac gctttggtgc ctggctgacg gcggacagca tcatcaacta
    18241 tctcaacacc aacctttcaa cgctggtgct ggcgcgtatt cttggcgcgg gcgtggcagg
    18301 gggatacaac ctggcgtaca acgtggccgt cgtaccgccg atgaagctga acccaatcat
    18361 cacccgcgtg ttatttccgg cattcgccaa aattcaggac gacaccgaaa agttgcgcgt
    18421 gaacttctac aagctgctgt cggtggtggg gattatcaac tttccggcgc tgctcgggct
    18481 gatggtggtg tcgaataact ttgtaccgct ggtctttggt gagaagtgga acagcattat
    18541 tccggtgctg caattgctgt gtattgtggg tctgctgcgc tccgtgggta acccgattgg
    18601 ttcgctgctg atggcgaaag cgcgggtcga tatcagcttt aaattcaacg tattcaaaac
    18661 atttctgttt attccggcga ttgttattgg tgggcagatg gcgggcgcaa tcggcgtcac
    18721 gctcggtttc ctgctggtgc agattatcaa caccattctg agttacttcg tgatgattaa
    18781 accggtactc ggttccagtt atcgccagta catcctgagt ttgtggctgc cgttttatct
    18841 ctcgctgccg acgctggtgg tcagttatgc gctgggcatt gtgctgaaag ggcaactggc
    18901 gctggggatg ctgctggcgg tgcaaatagc cgcgggcgtg ctggcgtttg tggtgatgat
    18961 tgtgctgtcg cgccatccgc taatggtgga agtgaagcgt cagttttgtc gcagcgaaaa
    19021 aatgaaaatg cttttacggg cggggtgagt tgctgttttc ggttccgaca acggttgccg
    19081 ggtgcagcgt aaaacgcctt atccatccta cggttctgtg ctcgggacct gtaggcctga
    19141 taagacgcgt cagcgtcgca tcaggcactg aatgccggat gcggcgtgaa cgccttatcc
    19201 ggcctacggt tctgtgctcg ggtcttgtag gcctgataag acgcgccagc gtcgcatcag
    19261 gcaaaaaacg gcaacgaaca caacaaacac agcctcacct ggcatcaaat ttatgaggaa
    19321 aaaatgaaat tacttattct gggcaaccac acttgcggca atcgtggcga cagcgccatc
    19381 ttgcgcggct tacttgatgc catcaacatc ctcaatccac aagccgaagt ggacgtgatg
    19441 agccgctatc cggtcagttc ttcctggctg ctcaaccgcc cggtaatggg cgatccgctg
    19501 ttcctgcaaa tgaaacaaca caacagcgcg gcgggcgttg tcgggcgcgt taaaaaagtc
    19561 ctccgtcgcc gctatcaaca ccaggtattg ctctcacgcg tcactgacac tggcaagctg
    19621 cgtaatatcg ccatcgccca gggattcacc gacttcgtgc gcctgctgtc aggttacgac
    19681 gccattattc aggtcggcgg atcgtttttt gtcgatctct acggcgtgcc gcagtttgaa
    19741 cacgcgcttt gcacatttat ggcgaaaaag ccgctgttta tgattggtca cagcgtcggt
    19801 cccttccagg atgagcaatt taaccaactg gcgaactacg tttttggtca ctgtaacgcg
    19861 ctgatcctgc gcgaatcggt cagccttgat ttgatgaaac gcagcaatat cactaccgca
    19921 aaagttgaac atggcgtcga tactgcgtgg ctggtcgatc accacaccga agatttcacc
    19981 gccagctatg ccgttcaaca ctggctggac gttgccgcac aacagaaaac ggtggcaatt
    20041 accctgcgcg aagtggcacc gttcgacaaa cgtctcggca ccactcagca agcgtatgaa
    20101 aaagcctttg ccggggtggt caatcgcatt ctcgatgaag ggtatcaggt gattgcgctt
    20161 tccacctgta cgggcatcga cagttataac aaagacgatc gcatggtggc gctcaatctg
    20221 cgccagcaca tcagcgatcc tgcccgttac cacgtagtga tggatgaact caacgatctg
    20281 gaaatgggca aaattctggg tgcctgtaaa ctcaccgttg gtacgcgtct gcactcagcc
    20341 attatctcaa tgaattttgc cactccggca attgccatca actacgaaca taaatccgcc
    20401 gggattatgc aacaactggg gctgccagag atggcgattg atatccgtca tttactggac
    20461 ggcagcttgc aagcgatggt tgcggatacc ttaggccaac ttccggcgct gaacgcgcga
    20521 cttaacgaag ccgtcagtcg cgaacgtcag acgggaatgc agatggtgca atctgtgctt
    20581 gagcgcatcg gggaggcgaa atgaaggtcg gcttcttttt actgaaattt ccgctgtcgt
    20641 cggaaacttt cgtcctcaac caaattaccg cgtttattga tatgggattt gaggtggaga
    20701 ttgtcgcgct gcaaaaaggc gacacacaaa acacccacgc ggcatggacg aaatacaacc
    20761 ttgccgccag aacccgctgg ttacaggacg aacctacggg aaaagtggcg aaactgcgcc
    20821 accgagccag ccagacctta cgcggcattc atcgtaaaaa tacctggcag gcgctcaacc
    20881 tcaaacgcta tggtgccgag tcgcggaacc tgattttgtc tgccatttgt ggccaggtcg
    20941 caacaccatt ttatgccgat gtctttatcg ctcattttgg ccctgcgggg gtaaccgcag
    21001 caaaactacg cgaactgggt gtgattcgcg gcaaaattgc caccatcttc catggtattg
    21061 atatctccag tcgggaagtg ctcaaccact acactcccga atatcaacaa ctgtttcgcc
    21121 gtggcgacct gatgctacca ataagcgatc tgtgggccgg aaggctgcaa aaaatgggtt
    21181 gccccagaga aaaaatcgcc gtatcgcgta tgggcgtgga catgacgcgc tttagcccgc
    21241 gtccggtgaa agcgcccgca acgccgctgg aaatcatatc tgtcgcacgc ttaaccgaga
    21301 aaaaaggcct gcatgtggcg attgaagcct gccgtcagtt gaaagagcag ggcgtggcat
    21361 ttcgctatcg catcctcggc attggcccgt gggaacgacg cctgcgtacc ctcatcgaac
    21421 aatatcaact ggaagatgtg gtagagatgc cgggctttaa accgagccac gaagtgaaag
    21481 cgatgctcga cgacgcggat gtcttcctgt tgccatcggt aacgggcgcg gatggcgata
    21541 tggaaggcat tccggtagcg ctgatggaag cgatggcggt cggcattccg gtggtttcta
    21601 ctctgcatag cggaataccg gaactggtgg aggccgataa atccggctgg ctggtgcctg
    21661 agaacgatgc tcgcgcactg gcacaacgtc tggcggcatt tagacaactg gacactgacg
    21721 aactggctcc ggttatcaaa cgtgcgcgcg aaaaagtcga acatgatttt aaccagcagg
    21781 tgatcaatcg agaactcgca agcttgctgc aagctttata gaggagaacg catgccattt
    21841 aaaacactct cccgacgcac cttcctgacg gcaagctcgg cgcttgcctt cctccataca
    21901 cctttcgccc gtgcacttcc tgcccgacaa agcgttaaca ttaacgacta caaccctcac
    21961 gactggatcg cctcatttaa acaagccttc agcgaagggc aaacggtcgt cgtgcctgcc
    22021 ggattggttt gcgacaatat caacaccggc atcttcattc ctcctggcaa aacgttacac
    22081 atccttggaa gcctgcgcgg caacggcaga gggcgatttg tcttacagga cggcagccag
    22141 gtgacagggg gggagggcgg cagtatgcat aacatcaccc tggatgtgcg cggctctgac
    22201 tgcaccatca aagggctgac tatgagcggc tttggtccgg taacgcagat ttatatcggc
    22261 ggcaaaaaca aacgggtcat gcgcaacctg accatcgata acctgaccgt tagccacgct
    22321 aattacgcca tcttacgcca gggatttcat aaccagatta tcggtgccaa catcaccaat
    22381 tgtaagttca gcgacttaca gggggacgct attgaatgga acgtggcgat taacgacagt
    22441 gatattttga tctccgacca catcatcgag cgcatcaact gtaccaacga caaaatcaac
    22501 tggggcatcg gcataggtct tgcggggagt acttacgata acaactaccc ggaagaccag
    22561 gcagtgaaaa actttgtcgt ggcgaatatt accggatcgg attgtcggca gttgatacat
    22621 gttgaaaatg gtaaacattt tgttattcgt aatatcaaag cccgcaatat cacgccggat
    22681 ttcagtaaga aagcaggcat tgataacgcc acagtcgcta tttacggttg tgacaatttc
    22741 gtgattgata atattgaaat gattaatagc gccgggatgt taatcggcta tggggtaatt
    22801 aaaggcaaat atctctcgat accgcaaaat ttccgagtga ataatattca gctggataac
    22861 acccaccttg cttacaaatt gcgcggcatc caaatctccg ccgggaatgc tgtctccttt
    22921 gtggcactga ctaacattga gatgaagcgt gcctcgctgg agctacacaa taaaccgcaa
    22981 caccttttta tgcgtaatat caaggtgatg cagaaatcct ctgttggacc agcattgagc
    23041 atgaactttg acatgcgcaa agacgttcgc ggcgtcttta tggcgaaaaa agaaacactg
    23101 ctatctcttg caaatgttca tgcggtgaat gaaagagggc aaagctccgt cgatatcgac
    23161 aggataaatc accatattgt taatgtggaa aagattaact ttagattgcc ggaacggagg
    23221 gagtagattt gcgaccattc ctggaaaaat ggagccatac ttaggaacaa tgctactgca
    23281 atccacaacg aagcggcgta acatcacaag taattcagta atcaattcag ggtaattgat
    23341 gctggcgaaa aaaatcgaac aagctataat tcagcaacca ttttacaggt ggatgaaata
    23401 atgacgaatt taaaagcagt tattcctgta gcgggtcttg ggatgcatat gttgcctgcc
    23461 actaaggcga ttcccaaaga gatgctaccg atcgtcgaca agccaatgat tcagtacatt
    23521 gttgacgaga tcgtggctgc agggatcaaa gaaatcctcc tggtaactca tgcgtccaag
    23581 aacgcagtcg aaaaccactt cgacacctct tatgaattag aatctctcct tgagcagcgc
    23641 gtgaagcgtc aactgctggc ggaagtacag tccatctgtc caccgggagt aaccattatg
    23701 aacgtgcgtc agggtgaacc tttaggttta ggccactcca ttttatgtgc gcgacctgcc
    23761 attggtgaca atccatttgt cgtggtactg ccggacgttg tgatcgacga tgccagcgcc
    23821 gacccgctgc gttacaacct tgctgccatg attgcgcgct tcaatgaaac gggccgcagc
    23881 caggtgctgg caaaacgtat gccgggtgac ctctctgaat actccgtcat tcagaccaaa
    23941 gaaccactgg atcgtgaagg taaagtcagc cgcatcgtcc aatttatcga aaaaccggat
    24001 cagccgcaga cgctggactc agacatcatg gccgttggtc gctatgtgct ttctgccgat
    24061 atttggccgg aactggaacg tactcagcct ggtgcatggg gacgtattca gctgactgat
    24121 gctattgccg agctggcgaa aaaacagtcc gttgatgcca tgctgatgac tggggacagt
    24181 tacgactgcg gtaaaaaaat gggttatatg caggcatttg tgaagtatgg actacgcaac
    24241 ctgaaagaag gggcgaagtt cagagagctg attataaaaa gtttacaaga ataaaacttt
    24301 tagtctttat atttcgaaac gtattactaa acaagcggcg tctggctagc tgaatggctg
    24361 aatgaatggg atattcgttt tttataaagc gagttagacg tgctttgtag cgccataata
    24421 cgatgaccag tgggggatta ttaaggaccg aaagtatatt
//
LOCUS       DAPGWB010000065        24410 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.065, whole genome shotgun sequence.
ACCESSION   DAPGWB010000065 DAPGWB010000000
VERSION     DAPGWB010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 24410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24410
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.065"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            141..824
                     /locus_tag="RHX79_002467"
     CDS             141..824
                     /locus_tag="RHX79_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001049551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HDV2197623.1"
                     /translation="MNLKKIFFSAVTVSVLCALTGCDYIEEGKPESSLLKQQEEHNNK
                     IDLLEKQQAQLKSQLETIQKQQTGIISSTKTLTHVIKSVKDQQNTFIFTEFNPAKTKY
                     FILNNGSVALAGRVLSIDATENGSVIHISLVNLLSTPISNIGFNATWGGEKPVDAKEF
                     ARWQQLLFNTSMKSTLKLLPGQWQDINLTLKGVSPNNLGYLKLAINMENIQFDNLPSA
                     ENRQKRSKK"
     gene            868..5718
                     /gene="ehaG"
                     /locus_tag="RHX79_002468"
     CDS             868..5718
                     /gene="ehaG"
                     /locus_tag="RHX79_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric autotransporter adhesin EhaG"
                     /protein_id="HDV2197624.1"
                     /translation="MNKIFKVIWNPATGNYTVTSETAKSRGKKSGRSKLLISALVAGG
                     MLSSFGALANAGNDNGQGVDYGSGSAGDGWVAIGKGAKANTFMNTSGSSTAVGYDAIA
                     EGQYSSAIGSKTHAIGGASMAFGVSAISEGDRSIALGASSYSLGQYSMALGRYSKALG
                     KLSIAMGDSSKAEGANAIALGNATKATEIMSIALGDTANASKAYSMALGASSVASEEN
                     AIALGRSSVASGTDSLAFGRQSLASAANAIAIGAETEAAENATAIGNNAKAKGTNSMA
                     MGFGSLADKVNTIALGNGSQALADNAIAIGQGNKADGVDAIALGNGSQSRGLNTIALG
                     TASNATGDKSLALGSNSSANGINSVALGADSIADLDNTVSVGNSSLKRKIVNVKNGAI
                     KSDSYDAINGSQLYAISDSVAKRLGGGAAVDVDDGTVTAPTYNLKNGSKNNVGAALAV
                     LDENTLQWDQTKGKYSAAHGTSSPTASVITDVADGTISASSKDAVNGSQLKATNDDVE
                     ANTANIATNTSNIATNTANIATNTTNITNLTDSVGDLQADALLWNETKKAFSAAHGQD
                     TTSKITNVKDSDLTADSTDAVNGSQLKTTNDAVATNTTNIANNTSNIATNTTNISNLT
                     ETVTNLGEDALKWDKDNGVFTAAHGTETTSKITNVKDGDLTTGSTDAVNGSQLKTTND
                     AVATNTTNIATNTTNISNLTETVTNLGEDALKWDKDNGVFTAAHGNNTASKITNILDG
                     TVTATSSDAINGSQLYDLSSNIATYFGGNASVNTDGVFTGPTYKIGETNYYNVGDALA
                     AINSSFSTSLGDALLWDATAGKFSAKHGTNGDASVITDVADGEISDSSSDAVNGSQLH
                     GVSSYVVDALGGGAEVNADGTITAPTYTIANADYDNVGDALNAIDTTLDDALLWDADA
                     GENGAFSAAHGKDKTASVITNVANGAISAASSDAINGSQLYTTNKYIADALGGDAEVN
                     ADGTITAPTYTIANAEYNNVGDALDALDDNALLWDETANGGAGAYNASHDGKASIITN
                     VANGSISEDSTDAVNGSQLNATNMMIEQNTQIINQLAGNTDATYIQENGAGINYVRTN
                     DDGLAFNDASAQGVGATAIGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVSSRVIA
                     KGSRDTSITENGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTVRQLQ
                     NAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVDANAL
                     NGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGSADGQRQ
                     ITNVAAGSADTDAVNVGQLKVTDAQVSQNTQSITNLDNRVTNLDSRVTNIENGIGDIV
                     TTGSTKYFKTNTDGVDASAQGKDSVAIGSGSIAAADNSVALGTGSVAEEENTISVGSS
                     TNQRRITNVAAGVNATDAVNVSQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGGTTR
                     ISNVSAGVNNNDAVNYAQLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMAM
                     TGLPQAYTPGASMASIGGGTYNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAAL
                     GAGIQW"
     gene            6087..7742
                     /gene="lldP"
                     /locus_tag="RHX79_002469"
     CDS             6087..7742
                     /gene="lldP"
                     /locus_tag="RHX79_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDV2197625.1"
                     /translation="MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAAS
                     WTVAIALAVALLFYKMPVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDI
                     IRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLC
                     LIVNTAPVAFGAMGIPILVAGQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWR
                     GIKETWPAVVVAGGSFAIAQYLSSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFR
                     FGDLGASQVDMTLAHTGYTAGQVLRAWTPFLFLTATVTLWSIPPFKALFASGGALYEW
                     VINIPVPYLDKLVARMPPVVSEATAYAAVFKFDWFSATGTAILFAALLSIVWLKMKPS
                     DAISTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGHAFTFFSPFLG
                     WLGVFLTGSDTSSNALFAALQATAAQQIGVSDLLLVAANTTGGVTGKMISPQSIAIAC
                     AAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP"
     gene            7742..8518
                     /gene="lldR"
                     /locus_tag="RHX79_002470"
     CDS             7742..8518
                     /gene="lldR"
                     /locus_tag="RHX79_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LldR"
                     /protein_id="HDV2197626.1"
                     /translation="MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVS
                     RNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDIL
                     EARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHN
                     IVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAM
                     MAHLSFVHTTMKRFDEDQARHARITRLPGEHYEHSREKNA"
     gene            8515..9705
                     /gene="lldD"
                     /locus_tag="RHX79_002471"
     CDS             8515..9705
                     /gene="lldD"
                     /locus_tag="RHX79_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent L-lactate dehydrogenase"
                     /protein_id="HDV2197627.1"
                     /translation="MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSE
                     VALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIP
                     FTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
                     PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLE
                     DYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHG
                     GRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLY
                     ALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPTALAPMAK
                     GNAA"
     gene            9891..10364
                     /gene="trmL"
                     /locus_tag="RHX79_002472"
     CDS             9891..10364
                     /gene="trmL"
                     /locus_tag="RHX79_002472"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HDV2197628.1"
                     /translation="MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRL
                     RRAGLDYHEFTAVTRHHDFRAFLEAENPQRLFALTTKGTPAHSAVNYQDGDYLMFGPE
                     TRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGALLRD"
     gene            complement(10417..11238)
                     /gene="cysE"
                     /locus_tag="RHX79_002473"
     CDS             complement(10417..11238)
                     /gene="cysE"
                     /locus_tag="RHX79_002473"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDV2197629.1"
                     /translation="MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSA
                     LSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPL
                     LYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHAT
                     GIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGA
                     KIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI"
     gene            complement(11318..12337)
                     /gene="gpsA"
                     /locus_tag="RHX79_002474"
     CDS             complement(11318..12337)
                     /gene="gpsA"
                     /locus_tag="RHX79_002474"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDV2197630.1"
                     /translation="MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATL
                     ERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPD
                     ARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTD
                     QTFADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTAL
                     ITRGLAEMSRLGAALGADPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSA
                     QEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKD
                     ERSSH"
     gene            complement(12337..12804)
                     /gene="secB"
                     /locus_tag="RHX79_002475"
     CDS             complement(12337..12804)
                     /gene="secB"
                     /locus_tag="RHX79_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015369180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HDV2197631.1"
                     /translation="MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDL
                     DTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYC
                     PNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA"
     gene            complement(12867..13118)
                     /gene="grxC"
                     /locus_tag="RHX79_002476"
     CDS             complement(12867..13118)
                     /gene="grxC"
                     /locus_tag="RHX79_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HDV2197632.1"
                     /translation="MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEM
                     IKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK"
     gene            complement(13260..13691)
                     /locus_tag="RHX79_002477"
     CDS             complement(13260..13691)
                     /locus_tag="RHX79_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDV2197633.1"
                     /translation="MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGE
                     ATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDG
                     SGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK"
     gene            13936..15480
                     /gene="gpmM"
                     /locus_tag="RHX79_002478"
                     /gene_synonym="pgmI"
     CDS             13936..15480
                     /gene="gpmM"
                     /locus_tag="RHX79_002478"
                     /gene_synonym="pgmI"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HDV2197634.1"
                     /translation="MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPH
                     TLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGA
                     VDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR
                     SAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADT
                     AVAGLQAAYARDENDEFVKATVIRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVN
                     ADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWMAKNDKTQLRISET
                     EKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKY
                     DTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQ
                     MRDPATGQAHTAHTNLPVPLIYVGDKNVKAVAGGKLSDIAPTMLSLMGMEIPQEMTGK
                     PLFIVE"
     gene            15490..16773
                     /gene="envC"
                     /locus_tag="RHX79_002479"
     CDS             15490..16773
                     /gene="envC"
                     /locus_tag="RHX79_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator EnvC"
                     /protein_id="HDV2197635.1"
                     /translation="MRGKAINTMTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADE
                     RDQLKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNK
                     QIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYF
                     GYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKK
                     TLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEA
                     TRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIG
                     ASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQ
                     PIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR"
     gene            16777..17736
                     /locus_tag="RHX79_002480"
     CDS             16777..17736
                     /locus_tag="RHX79_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312519.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDV2197636.1"
                     /translation="MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVL
                     AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDE
                     IERIIRRAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGYTQA
                     MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVL
                     QQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPV
                     YANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN"
     gene            complement(17723..18757)
                     /gene="waaH"
                     /locus_tag="RHX79_002481"
     CDS             complement(17723..18757)
                     /gene="waaH"
                     /locus_tag="RHX79_002481"
                     /EC_number="2.4.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronate:LPS(HepIII) glycosyltransferase"
                     /protein_id="HDV2197637.1"
                     /translation="MMNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDG
                     STDNSVEIAKHYAENYPHVRLLHQANAGASVARNRGIEVATGKYVAFVDADDEVYPTM
                     YETLMTMALEDDLDVAQCNADWCFRETGETWQSIPSDRLRSTGVLTGPDWLRMGLSSR
                     RWTHVVWMGVYRRDVIVKNNIKFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLH
                     NTSVSRLHRQGNKNLNYQRHYIKITRLLEKLNRNYADKITIYPEFHQQITYEALRVCH
                     AVRKEPDILTRQRMIAEIFTSGMYKRLITNVRSVKVGYQALLWSFRLWQWRDKTRSHH
                     RITRSAFNLR"
     gene            complement(18996..20021)
                     /gene="tdh"
                     /locus_tag="RHX79_002482"
     CDS             complement(18996..20021)
                     /gene="tdh"
                     /locus_tag="RHX79_002482"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HDV2197638.1"
                     /translation="MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHI
                     YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGG
                     RTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
                     DLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKE
                     NLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKV
                     IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSG
                     KVILSWD"
     gene            complement(20031..21227)
                     /gene="kbl"
                     /locus_tag="RHX79_002483"
     CDS             complement(20031..21227)
                     /gene="kbl"
                     /locus_tag="RHX79_002483"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HDV2197639.1"
                     /translation="MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
                     INFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM
                     EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQE
                     LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
                     GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS
                     LAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGD
                     AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK
                     QLGVIA"
     gene            21441..22373
                     /gene="rfaD"
                     /locus_tag="RHX79_002484"
     CDS             21441..22373
                     /gene="rfaD"
                     /locus_tag="RHX79_002484"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDV2197640.1"
                     /translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD
                     LNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLH
                     YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
                     QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
                     DVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFT
                     QADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA"
     gene            22383..23429
                     /gene="rfaF"
                     /locus_tag="RHX79_002485"
     CDS             22383..23429
                     /gene="rfaF"
                     /locus_tag="RHX79_002485"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose--LPS heptosyltransferase RfaF"
                     /protein_id="HDV2197641.1"
                     /translation="MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPL
                     LSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGI
                     PHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYVALAYDKGIMRTAQDLPQPLLWPQL
                     QVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVL
                     FGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVA
                     AALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQR
                     VLEELNALLLQEEA"
     gene            23433..24404
                     /gene="rfaC"
                     /locus_tag="RHX79_002486"
     CDS             23433..24404
                     /gene="rfaC"
                     /locus_tag="RHX79_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HDV2197642.1"
                     /translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPEIKFDWVVEEGFAQI
                     PSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAAL
                     VTRLAHGVKHGMDWQTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQ
                     GDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWG
                     APHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNI
                     TVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKRFIEENAAMI"
BASE COUNT         6133 a         6329 c         6316 g         5632 t
ORIGIN      
        1 catttttatg atgaatgctt aaaacaatat ttaatcgaca cacatcactg tcattaatgt
       61 aaagcaacat agatcaccaa taatacaatg gacaactcta ccggcattga tcgctggtcg
      121 gaggaaataa ggatttttac atgaacttga agaagatttt tttcagtgct gtcactgttt
      181 cagttctctg cgcattaacg ggatgtgact acattgaaga aggcaagcca gaaagtagtt
      241 tattgaaaca acaagaagaa cataacaata aaattgatct acttgaaaaa caacaagcac
      301 agctaaagag tcaactggaa actattcaaa aacaacaaac tggcataata agcagtacaa
      361 agactttaac tcacgtaatt aaatccgtta aagatcaaca aaacactttt atttttaccg
      421 agtttaaccc agcaaaaacg aagtatttca tcctgaacaa tggttcggtg gctttagcgg
      481 gtcgagtgtt atccattgac gccacagaga atggcagtgt tattcatatt tcactggtca
      541 acttattaag tacacctatc tcaaatattg gttttaatgc gacatggggt ggtgaaaaac
      601 ctgtcgatgc caaagagttt gcccggtggc aacaattact tttcaacaca tcaatgaaat
      661 ccacattgaa attattacca ggtcaatggc aagacattaa tttgaccctg aagggtgtat
      721 cgcccaataa cctgggatat ctgaagttag ccatcaacat ggaaaatatt cagttcgaca
      781 atcttccctc tgctgaaaat cggcagaaaa gaagcaaaaa ataaatgcag ttagtacgct
      841 tataacaagg aatagcgagc atcattaatg aacaaaatat ttaaagttat ctggaaccct
      901 gcgacaggga attatactgt taccagcgaa acggcaaaaa gccgtggcaa gaaatctggg
      961 cgcagtaagc tgttaatttc tgcgctggtt gcgggtggaa tgttgtcgtc gtttggggca
     1021 ttggcgaatg ccgggaatga caacggtcag ggtgttgatt acggtagtgg atcagctggc
     1081 gacggctggg ttgctatagg caaaggggcg aaagcaaata cttttatgaa caccagtggt
     1141 tccagtactg ctgtgggtta tgacgctata gctgaaggcc aatatagctc tgccatcggg
     1201 tcaaaaaccc atgcgattgg cggtgcatca atggcctttg gggttagtgc aatatcagaa
     1261 ggcgatagaa gtatagcact gggtgcctct tcgtattcat tgggccaata ctcaatggcc
     1321 ctcggccgtt attcaaaagc attgggtaaa ttgtctattg ctatggggga ctcttccaaa
     1381 gcggaaggag caaacgccat tgccctggga aatgccacta aagctactga gattatgagt
     1441 attgctcttg gcgacaccgc caatgcgtca aaagcgtatt caatggcgct gggagcaagt
     1501 agcgtcgcat ctgaagaaaa cgcaattgcc ctggggcgta gcagtgtagc tagcggtact
     1561 gacagcctcg catttggcag acaatcactt gccagcgcag cgaacgctat tgcgataggt
     1621 gctgagaccg aagccgctga aaatgcaact gctattggca ataatgcgaa ggcaaaaggg
     1681 actaatagca tggcaatggg gttcggaagc cttgccgata aagtcaatac tatcgcatta
     1741 ggaaatggca gccaggctct ggcagataat gcaatcgcca taggccaggg caacaaagct
     1801 gatggcgtgg atgccatcgc tctgggtaat ggtagccagt cgagaggctt aaacaccatt
     1861 gccttaggca cagccagtaa tgcaactggt gataagagtc ttgcgcttgg tagtaatagc
     1921 agtgccaacg gtattaactc tgtcgcgctg ggcgcagatt ccattgcgga tttagacaat
     1981 accgtctctg tcggcaatag ttcattaaaa cgcaagatcg ttaatgtgaa aaatggcgcg
     2041 atcaagtctg acagttacga tgccattaat ggttcacagc tttatgccat tagcgactcg
     2101 gtagcaaaaa ggcttggagg aggggctgca gtagatgttg atgacggtac tgttacagca
     2161 ccaacctaca atttaaaaaa tggtagcaaa aataacgtag gggctgcgct cgctgtactt
     2221 gatgaaaaca ccctgcaatg ggaccaaacc aaaggcaaat acagcgctgc tcatggtact
     2281 agtagcccaa ctgccagcgt aatcaccgat gttgcggatg gcacgatttc agcctccagt
     2341 aaggatgcgg ttaacggttc ccaactgaaa gctaccaatg acgatgtcga agccaacacc
     2401 gccaatatcg ctactaatac cagcaacatt gccacgaata cggcaaatat tgccaccaat
     2461 accaccaata tcaccaacct gacggattcc gttggtgacc ttcaggctga tgccctgctc
     2521 tggaacgaaa ctaaaaaggc attcagtgca gctcacggcc aggataccac cagcaaaatc
     2581 accaacgtta aagattcgga cctgacggct gacagcactg atgctgttaa cggctctcag
     2641 ctgaaaacca ccaacgatgc tgtggcgacg aataccacca atatcgccaa taacacttcc
     2701 aatattgcca ctaacaccac caacatctct aacctgactg agacggtgac taatcttggt
     2761 gaggatgcgc tgaaatggga taaggacaat ggtgtattca cggcagctca tggcaccgag
     2821 accaccagca aaatcaccaa cgttaaagat ggcgacctga cgactggcag caccgatgcc
     2881 gttaacggct ctcagctgaa aaccaccaac gatgccgtgg cgacgaatac caccaatatc
     2941 gccactaaca ccaccaacat ctctaatctg actgagacgg tgactaatct tggtgaggat
     3001 gcgctgaaat gggataagga caatggtgtc ttcactgcag ctcatggcaa caataccgcc
     3061 agcaaaatca ccaatatcct ggacggcaca gtcactgcaa ccagttccga tgccattaac
     3121 ggtagccagc tttatgactt aagcagcaat atcgccacct acttcggcgg caatgcttct
     3181 gtgaatactg acggtgtgtt taccggtcca acctacaaaa tcggtgaaac aaattattat
     3241 aacgtcggcg atgcactggc tgcgattaac tcctcattta gcacgtctct cggcgatgct
     3301 ctgctttggg atgccaccgc aggtaaattc agtgccaaac acggtactaa tggtgacgca
     3361 agcgtgatca ctgatgtcgc agatggtgaa atttcagact ccagttctga cgcagtaaac
     3421 ggctcacaac tccacggcgt gagcagttat gttgttgatg cgctgggggg tggtgccgaa
     3481 gtcaatgcag acggcaccat cactgcgccg acgtacacca ttgctaatgc tgattacgat
     3541 aatgtcggtg atgccctgaa tgctatcgat accactcttg acgacgctct gctctgggat
     3601 gcggacgccg gtgaaaatgg tgcatttagc gccgctcacg gaaaagataa aactgccagt
     3661 gtaatcacta acgtcgctaa cggtgcaatc tctgctgcca gcagcgacgc gattaacggc
     3721 tcacaactct ataccaccaa taagtacatc gctgatgcgc tgggtggtga cgcagaagtc
     3781 aacgctgacg gcaccatcac cgcaccgact tacaccattg cgaacgccga gtacaacaac
     3841 gtcggtgacg ccctggatgc gcttgatgat aacgccctgc tgtgggatga gactgccaat
     3901 ggcggtgctg gagcctacaa tgccagccat gacggtaaag ccagcatcat cactaatgtc
     3961 gctaatggca gtattagtga ggacagtacc gatgcagtga acggttctca gttgaatgcg
     4021 acgaatatga tgattgagca gaacacccaa attatcaatc agctcgctgg taacaccgac
     4081 gcaacctata tccaagaaaa cggtgcgggt attaactatg tgcgtactaa cgacgacggc
     4141 ttagcgttca acgacgccag cgcacagggt gttggcgcta cagctatagg ttataactct
     4201 gtcgccaaag gcgatagcag cgtagctatt ggtcagggca gctacagcga cgttgatacg
     4261 ggtatcgccc tgggtagcag ctctgtttcc agccgagtga ttgccaaagg ctcccgtgac
     4321 accagcataa cggaaaatgg cgttgttatt ggttacgaca ccacggatgg cgaactgctc
     4381 ggtgcattgt ctatcggtga tgacggtaaa tatcgtcaaa tcatcaacgt agccgatggt
     4441 tccgaagccc atgacgccgt tacggttcgt caattgcaga atgcgattgg tgcggtcgca
     4501 accacgccga ctaaatactt ccacgctaat tcaacggaag aagattcact ggcagtggga
     4561 actgactcgc tggcaatggg tgcgaaaacc atcgtgaatg gcgataaagg tattggtatc
     4621 ggttatggtg cctacgtgga cgcgaatgca cttaacggca ttgccattgg tagcaatgcg
     4681 caagtcattc atgtcaacag tattgcgata ggtaatggtt ctacgaccac tcgtggcgct
     4741 caaaccaatt ataccgccta caacatggac gcaccgcaga actctgtcgg tgaattctca
     4801 gtcggtagtg cggatggtca acgtcagatc actaacgtcg cagcaggttc ggctgatacc
     4861 gatgcggtca acgtgggtca gttgaaagta acggatgcgc aggtttccca gaatacccag
     4921 agcattacta acctggataa tcgggtaacg aatcttgatt cacgcgtcac caatatcgaa
     4981 aacggtattg gcgatatcgt caccaccggt agcaccaagt acttcaagac caataccgat
     5041 ggtgtagatg ccagcgcgca gggtaaagat agcgtcgcga ttggttctgg ctccattgct
     5101 gccgcggata acagcgtcgc actgggtacc ggttccgttg cagaggaaga aaatacaatc
     5161 tctgtaggtt cttctactaa ccaacgccgt atcaccaacg tagctgccgg tgttaatgcc
     5221 accgatgcgg ttaacgtgtc gcagctgaaa tcttctgaag caggcggcgt gcgttacgac
     5281 accaaagctg atggttctat cgactatagc aatatcaccc tcggtggcgg caacggcggt
     5341 acgactcgta tcagcaacgt ctccgctggc gtcaacaaca acgacgcggt gaattacgcg
     5401 cagttgaagc aaagcgtgca ggaaacgaag caatacaccg atcagcgaat ggttgagatg
     5461 gataacaaac tgtctaaaac tgaaagcaag ttgagcggtg gtatcgcttc tgcaatggca
     5521 atgaccggtc tgccgcaggc ttatacaccg ggtgccagca tggcttctat tggtggcggt
     5581 acttacaacg gtgaatcggc agttgcttta ggtgtatcga tggtgagcgc caatggtcgt
     5641 tgggtctaca aattacaagg tagtaccaat agccagggtg aatactccgc cgcactcggt
     5701 gccggtattc agtggtaatg atccattaag ttagtgtgac taagggcaaa cgccaaattg
     5761 cctgatgcgt tacgcgcatc aggcaagata aggcgctccg ggtcaacaat ctaagggcaa
     5821 ttctctgatg aggattgccc tttttcttta ccagacatct ccccccacaa gaattggccc
     5881 taccaattct tcgcttatct gacctctggt tcacaattcc ccaattaaaa ctcacatcaa
     5941 tattgccaat acataacatt tagttaacca ttcattgtca ttatccctac acaacacaat
     6001 tggcagtgcc acttttacac aacgtgtgac aaggagatga gcaacagact cattacacga
     6061 tgtgcgtgga ctccaggaga cctgcaatga atctctggca acaaaactac gatcccgccg
     6121 ggaatatctg gctttccagt ctgatagcat cgcttcccat cctgtttttc ttctttgcgc
     6181 tgattaagct caaactgaaa ggatacgtcg ccgcctcgtg gacggtggca atcgcccttg
     6241 ccgtggcttt gctgttctat aaaatgccgg tcgctaacgc gctggcctcg gtggtttatg
     6301 gcttcttcta tggtttgtgg cccatcgcgt ggatcattat tgcagcagtg ttcgtctata
     6361 agatctcggt gaaaaccggg cagtttgaca tcattcgctc gtctattctt tcgataaccc
     6421 ctgaccagcg tctgcaaatg ctgatcgtcg gtttctgttt cggcgctttc cttgaaggag
     6481 ccgccggctt tggcgcaccg gtagcaatta ccgccgcatt gctggtcggc ctgggtttta
     6541 aaccgctgta cgccgccgga ctgtgcctga ttgttaacac cgcgccagtg gcatttggcg
     6601 cgatgggcat tccaatcctg gttgccggac aagtaacagg catcgacagt tttgagattg
     6661 gccagatggt ggggcgtcag ctaccgttta tgaccattat cgtgctgttc tggatcatgg
     6721 cgattatgga cggctggcgc ggtatcaaag agacgtggcc tgcggtcgtg gttgcgggcg
     6781 gctcgtttgc catcgctcag taccttagct ccaacttcat tgggccggag ctgccggaca
     6841 ttatctcttc gctggtatca ctgctctgcc tgacgctgtt cctcaaacgc tggcaaccag
     6901 ttcgcgtatt ccgcttcggt gacttggggg cgtcacaggt tgatatgacg ctggcccaca
     6961 ccggttacac cgcgggtcag gtgttacgtg cctggacacc gttcctgttc ctgaccgcta
     7021 ccgtaacact gtggagcatc ccgccgttta aagccctgtt cgcatcgggt ggtgcgctgt
     7081 atgagtgggt gatcaacatt ccggtgccgt acctcgataa actggttgcc cgtatgccac
     7141 cagtggtcag cgaggctaca gcctatgccg ccgtgtttaa gtttgactgg ttctctgcca
     7201 ccggcaccgc cattctgttt gctgcactgc tctcgattgt ctggctgaag atgaaaccgt
     7261 ctgacgctat cagcaccttc ggcagcacgc tgaaagaact ggctctaccc atctactcca
     7321 tcggcatggt gctggcgttc gcctttatct cgaactattc cggactgtca tcaacactgg
     7381 cactggcact ggcgcacacc ggtcatgcat tcaccttctt ctcgccgttc ctcggctggc
     7441 tgggggtatt cctgaccggg tcggatacct catctaacgc cctgttcgcc gcgctgcaag
     7501 ccaccgcagc acaacaaatt ggcgtctctg atctgttgct ggttgccgcc aataccaccg
     7561 gtggcgtcac cggtaagatg atctccccgc aatctatcgc tatcgcctgt gcggcggtag
     7621 gcctggtggg caaagagtct gatttgttcc gctttactgt caaacacagc ctgatcttca
     7681 cctgtatggt gggcgtgatc accacgcttc aggcttatgt cttaacgtgg atgattcctt
     7741 aatgattgtt ttacccagac gcctgtcaga cgaggttgcc gatcgtgtgc gggcgctgat
     7801 tgatgaaaaa aacctggaag cgggcatgaa gttgcccgct gagcgccaac tggcgatgca
     7861 actcggcgta tcacgtaatt cactacgcga ggcgctggca aaactggtga gcgaaggcgt
     7921 gctgctcagt cgacgcggcg gcgggacgtt tattcgctgg cgtcatgaca catggtcgga
     7981 gcaaaacatc gtccagccgc taaaaacgct gatggccgat gatccggatt acagtttcga
     8041 tattctggaa gcccgctacg ccattgaagc cagcaccgca tggcatgcgg caatgcgcgc
     8101 cacacctggc gacaaagaaa agattcagct ttgctttgaa gcaacgctaa gtgaagaccc
     8161 ggatatcgcc tcacaagcgg acgttcgttt tcatctggcg attgccgaag cctcacataa
     8221 catcgtgctg ctgcaaacca tgcgcggttt cttcgatgtc ctgcaatcct cagtgaagca
     8281 tagccgtcag cggatgtatc tggtgccacc ggttttttca caactgaccg aacaacatca
     8341 ggctgtcatt gacgccattt ttgctggtga tgccgacggg gcgcgtaaag caatgatggc
     8401 gcaccttagt tttgttcaca ccaccatgaa acgattcgat gaagatcagg ctcgccacgc
     8461 acggattacc cgcctgcccg gtgagcatta tgagcattcg agggagaaaa acgcatgatt
     8521 atttccgcag ccagcgatta tcgcgccgca gcgcaacgca ttctgccgcc gttcctgttc
     8581 cactatatgg atggtggtgc atattctgaa tacacgctgc gccgcaacgt ggaagatttg
     8641 tcagaagtgg cactgcgcca gcgtattctg aaaaacatgt ctgacttaag cctggaaacg
     8701 acgctgttta atgagaaatt gtcgatgccg gtagcactgg caccggtggg tttgtgtggc
     8761 atgtatgcgc gtcgtggcga agttcaggca gccaaagcgg cggacgcgca tggcattccg
     8821 tttactctct cgacggtttc cgtttgcccg attgaagaag tcgcgccagc catcaagcgc
     8881 ccaatgtggt tccagcttta tgtactgcgc gatcgcggct ttatgcgtaa cgcgctggag
     8941 cgagcaaaag cagcgggttg ttcgacgctg gttttcaccg tggatatgcc gacaccgggc
     9001 gcacgctacc gtgatgcgca ttcaggtatg agcggcccaa atgcggcaat gcgccgctac
     9061 ttgcaggcgg tgacgcatcc gcaatgggcg tgggatgtgg gcctgaacgg tcgtccacat
     9121 gatttaggta atatctcagc ttatctcggc aaaccgaccg gactggaaga ttacatcggc
     9181 tggctgggga ataacttcga tccgtccatc tcatggaaag accttgagtg gatccgcgat
     9241 ttctgggatg gcccgatggt gatcaaaggg atcctcgatc cggaagatgc gcgcgatgca
     9301 gtacgttttg gtgctgatgg aattgtggtt tctaaccacg gtggccgcca gctggacggt
     9361 gtactctctt ccgctcgtgc gttgcccgct attgcagatg cggtgaaagg tgatatcgcc
     9421 attctggcgg atagcggaat tcgtaacggg cttgatgtcg tgcgtatgat tgcgctcggt
     9481 gccgacaccg tactgctggg tcgtgctttc ctgtatgcgc tggcaacagc gggccaggcg
     9541 ggtgtagcta acctgctaaa tctgatcgag aaagagatga aagtggcaat gacgctgact
     9601 ggcgcgaaat cgatcagtga aattacgcaa gattcgctgg tgcaggggct gggtaaagag
     9661 ttgcctacgg cactggctcc gatggcgaaa gggaatgcgg catagtcgtt tgagccccct
     9721 caccctaacc ctctccctca gggagtgggg accgttcggc gctgtatgta ctccctcact
     9781 ctgaaacgac accgcactct ttttttctcc ctcgcccctc cggggtgagg ggaaaaggcc
     9841 gcactgctca ccaattttct gctatcctgc ccccgcacta agggggcagt atgctaaaca
     9901 tcgtacttta cgaaccagaa attccgccaa atactggcaa tatcatccgt ctttgcgcta
     9961 ataccggctt tcgtctgcat atcatcgaac cgatgggatt tgcctgggac gataagcgcc
    10021 tgcgccgcgc ggggctggac tatcacgagt ttaccgccgt tacgcgtcat catgactttc
    10081 gcgcgttcct cgaagcagaa aatccccagc gcctgtttgc cctcaccacg aaaggtacgc
    10141 ctgctcacag cgccgtaaac tatcaggatg gcgattatct gatgttcggc ccggaaacac
    10201 gcggcctgcc agcgagcatt cttgatgccc tgcccgctga acaaaaaatt cgcattccga
    10261 tggtgccgga cagccgcagc atgaacctgt ccaatgcggt gtcagttgtg gtgtatgaag
    10321 cctggaggca gctgggatat ccgggagcgt tgttgagaga ttagttactg tatgccggat
    10381 agatgattac atcgcatccg gcacgatcac aggacatcag atcccatccc catactcaaa
    10441 tgtatggtta ataccgttga aatgctggtc catatccatt gatggcttat cgctgtctgg
    10501 tttaccgaca atacgagccg gaacgccagc ggcggttgta tgcggcggca ccggttgcag
    10561 caccacggaa cctgcgccaa tcttcgcgcc gcgaccaact tcaatattgc cgaggatttt
    10621 cgcgcccgcg ccaatcatca caccttcacg aattttcggg tgacggtcac caccagattt
    10681 acccgtaccg ccaagcgtca cagattgcag aatcgatacg tcgttttcaa ttaccgccgt
    10741 ttcacccaca acgatgcccg tggcgtggtc gagcataatg ccacggccaa tttttgctgc
    10801 cgggtgaata tcgacctgga acgtcacaga aacctggttt tgcagaaaga ttgccaatgc
    10861 gcgacgcccc tgattccaca accagtgacc gatgcgatag gcctgcaagg catgaaaacc
    10921 cttcaggtat aacaacgggg ttgagtattt atcgactgcc gggtcgcggg tacgcaccgc
    10981 ctgaatatca caggccgcag aggcgatcat ttccgggtca gcggcgtagg cttcttccac
    11041 cacttcacgg atagcaatag caggcataat tggcgatgac agcttgttcg ccagcatgta
    11101 gctcagtgca ctaccaaggt tttcgtgctt gagtagcgtc gcgtggtaaa aactggccag
    11161 cattggctca cagtccgcca gcgttctggc ttcggcttta atattgttcc agacaatttc
    11221 cagttcttca cacgacattg cttactccac acgatgagat aatgaccggc ccgttctgcg
    11281 cgggccgggt catagcggta acaaaggttc cctggggtta gtggctgctg cgctcgtcct
    11341 tgcgtgcacg acctaataac gtcaatgctg cctcgcgcgc gttttttccg caatataata
    11401 cttgataaat ttcctcggtt attggcattt caacgccgaa gcgatgcgcc agttcgcgga
    11461 cttctttcgt attgcggtag ccttccacca cctgaccaat cttctcctgc gcgctttgta
    11521 catccatgcc ctgaccgagc atcatgccaa aacggcggtt acgcgactgg ttgtcggtac
    11581 aggtaagcac cagatcgcca agccccgcca tgcccataaa ggtggcagga tcggcaccca
    11641 gcgccgcacc aagacgcgac atttcagcca gcccacgggt gatcagcgcc gtacgcgcat
    11701 tcgcaccaaa accgataccg tcggacatcc ccgcgccaat ggcaatgacg tttttcaccg
    11761 caccgccaag ctgcacaccg atgaaatccg ggttgctgta aacgcggaaa cttttgccac
    11821 agtgcagcaa ttgttggaga tcatcggcaa aggtctggtc ggtagaggcc aacgaaatag
    11881 ccgtcggtaa acctgccgcc agttctttcg caaacgttgg gccagagata accgccagcg
    11941 gaatttgatc gcctaaggcc tcacgcgcca cgtcctgtaa cagacgtccg gtttccgctt
    12001 ccagcccttt ggtcgcccac accagacgcg catcaggacg catcagcggt ttaatctggc
    12061 gcagcacttc accaaagaca tggctgggta cgacgacgag aatattacgg ctggctgcca
    12121 gcgcagtggc gagatcgctt tcaagatgga gcgtatcggg aaaaggcaca tcggggagaa
    12181 acgcggcgtt acagcggtcg cgttcaagcg ttgcgatatg ttcagggtca tggccccaga
    12241 ggacaacctc gtggccattt cttgccaggg taatggcaag agcggtgccg tacgagccgg
    12301 caccgatcac agtcattgaa gcattacgtt ggttcatcag gcatcctgat gttcttcagt
    12361 accttcgcca gcctgctgct gcaaatagtt catgaacagc gcatcgaagt taaccggcgc
    12421 aaggttcagt tgcgggaatg taccgcggga taccatgctg gtgatgcact cacgagcata
    12481 cgggaacaga atgttcgggc agtatgcgcc caggcaatgt gccatctggg tgccttcgat
    12541 acccgcgatg gagaaaatac cgccctgctg aacttcacac aggaacgcgg tttcttcgcc
    12601 cagggaggcc gttacggtaa cacgcagtac cacttcgtat acgtcatctg ccagttggga
    12661 agatgccgta tccagatcaa gtttaacttc tggttgccaa tctttctgga aaacgtgcgg
    12721 cgcgttcggc gcttcgaaag agatatcctt ggtataaata cgttggatct ggaaagtcat
    12781 ttcagtgttg ttttgttctg acatgtgtag aaaaccctta agtgttgtcc ttaaatactg
    12841 cgcaatgtaa tgccaacgtt cacacgttat ttcagcaggg gatccagtcc accacgtgca
    12901 tccaatgcat acaagtcatc acagccgcca atgtgctgtg cgtcaataaa aatctgggga
    12961 accgtggtgc gaccgctgcg tttgatcatc tcttcacgct tggcggcatt gccatcgatc
    13021 ggcagctcct ggaaactcac gcccttgctg ctcagcagtg cttttgcacg atggcaatac
    13081 gggcaggttt ctttggtata gatttcaaca ttggccataa attagctcct gtttttttac
    13141 cctgaaattt catgttgcag ggcggcagca aaatggagtg tccccagaag cttataacaa
    13201 taagtcgctg ggggcctaat tgcagctaac ggcctgcatc atgaaagacg acaggtaaat
    13261 tatttgccgc gcaccagagg caagttttcg ccagcccagc cagcaacgcc ctctttcagc
    13321 acgaatactt gcgcaaaacc agctttcgtc agcgcgtttg caggctcctg gcactgcatg
    13381 ccagaaccgt ctaccacgat aaccggtttg tctttgtgct tctcaagctc accaacattg
    13441 ttggctttga tttcactcgg caacagattg atagaacctg cgatatggcc tttacggaag
    13501 tcatcacgct gacgtaaatc cacaaccaca gcgtcttctt tgttgatcag acgcgtagct
    13561 tcaccacgag taatcacctt cactttcgag gtcaggctct taaacgtagt cacaagaacc
    13621 gccaccagta acgcgatcca ggcgatactc agtatgggat gacggccaac aaattgcata
    13681 atttcttgca tggggggtaa caactcccga cgtagtgatt aaaaaaacca ggaaaggagt
    13741 atacctgcgc ggtgcggcaa atacagccag cgcgttaact ggaatgcaat tttgcggggc
    13801 acgacgaaaa aaaagcgcaa acctggcatc ggcttgccgc gagcggtcgt atattttgat
    13861 cttcagaggc tattttatcg attcagctgt agtaaaatta cgcaaatttt gactcttgag
    13921 tatgaggttg tcgcaatgtc ggtttctaaa aaacctatgg tactggtgat tctggatggc
    13981 tatggctatc gtgaagaaca gcaggataac gccattttta gtgctaaaac cccggtaatg
    14041 gatgcactgt gggccaatcg tccgcatacc ctgatcgacg cttccggtct ggaagtcggt
    14101 ctgcctgacc gtcagatggg taactccgaa gtaggccacg ttaacctggg tgccggccgc
    14161 atcgtgtatc aggacctgac tcgtctggac gttgaaatca aagatcgcgc tttctttgct
    14221 aatccagtgc tgactggcgc ggtagataaa gcgaaaaacg caggtaaagc agtacacatt
    14281 atgggtctgc tctccgcagg cggcgtacac agccacgaag atcacatcat ggcgatggta
    14341 gaactggcag ctgaacgcgg cgcagaaaaa atctacctgc acgcattcct tgacggtcgc
    14401 gacaccccgc cgcgcagtgc tgaatcctcg ctgaaaaaat ttgaagagaa atttgctgcg
    14461 ctgggtaaag gccgcgtagc gtccatcatt ggtcgttact acgcgatgga ccgcgataac
    14521 cgttgggatc gcgttgaaaa agcctatgac ctgctgactc tggcgcaggg tgagttccag
    14581 gccgatactg ccgttgctgg tttgcaggca gcttatgctc gcgacgaaaa cgacgagttc
    14641 gtgaaagcga ccgttattcg tgcagaaggt cagccagatg cggcaatgga agacggcgat
    14701 gcgctgattt tcatgaactt ccgtgctgac cgcgcgcgtg aaatcactcg tgcattcgtg
    14761 aacgctgatt tcgatggctt cgcgcgtaag aaagtggtta acgtcgattt cgtgatgctg
    14821 accgaatacg ccgctgacat caaaactgcg gttgcttacc cacccgcttc cctggttaac
    14881 accttcggcg agtggatggc gaaaaacgac aaaactcagt tgcgtatttc cgaaaccgaa
    14941 aaatatgccc acgttacttt cttcttcaac ggtggcgtag aagagtcgtt caaaggcgaa
    15001 gatcgcattc tgatcaactc accgaaagtg gctacctacg atctgcaacc ggaaatgagc
    15061 tccgcagagc tgaccgaaaa actggttgcg gccatcaaga gcggcaaata cgacaccatt
    15121 atctgtaact atccgaacgg cgacatggta ggtcacaccg gggtgatgga agcggcggtt
    15181 aaagcggttg aagcactgga tcactgcgtg gaagaagtcg cgaaagcggt tgagtccgtg
    15241 ggtggacaac tgctgatcac cgctgaccac ggtaacgctg aacagatgcg cgatccggca
    15301 acgggtcagg cacacacggc acacaccaac ctgccagttc cgctgattta cgttggtgat
    15361 aagaacgtga aagcggttgc aggcggcaaa ctttctgaca tcgcgccgac catgttgtcg
    15421 ctgatgggta tggaaatccc gcaagagatg actggtaagc cgctgttcat cgtggaataa
    15481 tccctcccca tgaggggaaa ggcgattaat accatgacac gggccgtgaa accgcgcagg
    15541 tttgcaatca ggcccatcat ctacgccagc gttcttagcg ctggcgtatt gttgtgcgcc
    15601 ttttccgccc acgcggatga gcgtgaccaa ctcaaatcta ttcaggccga tatcgccgcg
    15661 aaagagcgcg cggtacgcca aaagcaacaa caacgcgcaa gcctgctcgc acaattgaaa
    15721 aagcaggaag aagcgatctc tgaagccacc cgtaagctgc gcgaaacgca aaacactctc
    15781 aatcaactca ataaacagat tgatgagatg aacgcgtcga ttgccaaact ggagcagcaa
    15841 aaagccgccc aggagcgcag cctcgccgca caactggatg ccgcattccg tcagggcgag
    15901 cataccggta ttcagctaat tctcagcggt gaagaaagcc agcgtggaca gcgtttacag
    15961 gcttatttcg gctatctcaa ccaggcgcga caagaaacca ttgcccagtt gaagcaaacg
    16021 cgtgaagaag tcgccatgca gcgtgctgaa ctggaagaga aacaaagcga gcaacaaacg
    16081 ctgttatatg aacagcgcgc ccaacaggcg aaactgactc aggctctgaa cgagcgtaaa
    16141 aagacgctgg cggggctgga atcttccatc cagcaaggtc agcagcagct aagtgaactg
    16201 cgtgccaacg aatcccgtct gcgtaacagc attgcccgtg cggaagccgc ggcgaaagcg
    16261 cgtgctgaac gagaagcgcg tgaggcccag gcggttcgcg accgccagaa agaagcgacg
    16321 cgcaaaggca ccacctacaa accgaccgaa agcgaaaaat cgctgatgtc ccgaactggt
    16381 ggcctgggtg cgccgcgtgg tcaggcattc tggccggttc gcgggccgac gctgcatcgc
    16441 tatggtgaac agctacaggg cgaactacgc tggaaaggaa tggttatcgg tgcctctgaa
    16501 ggtactgaag ttaaagcgat tgccgacggt cgggtgattc tggctgactg gctgcaaggt
    16561 tacggtctgg tggtggtggt tgagcacggt aaaggcgaca tgagtcttta cggctataat
    16621 cagagcgcac tggtgagcgt tggttcgcag gttcgcgcgg gccagccaat tgcactggtg
    16681 ggcagcagtg gcggtcaggg tcggccttca ctctatttcg aaattcgccg ccagggtcag
    16741 gcggtcaatc cacagccgtg gttgggaaga taagttttgt ttccatttcg tcgtaacgtt
    16801 cttgcatttg ccgctctgtt ggcgctctcc tcccccgtac ttgctggcaa acttgccatc
    16861 gtcattgatg attttgggta tcgcccgcac aacgaaaacc aggtgctggc gatgccctcc
    16921 gctatctccg tcgctgtatt acccgattca ccgcacgcca gagagatggc gaccaaagcg
    16981 cataacagcg ggcacgaagt gttgattcat ctcccgatgg caccactgag taaacagccg
    17041 ctggagaaaa atacgctgcg cccggagatg agcagcgacg aaattgagcg cattattcgt
    17101 agagcggtca ataacgtgcc ctatgccgtg gggatcaaca accacatggg tagcaagatg
    17161 acctctaacc tgtttggtat gcagaaagtg atgcaggcac tggagcgtta caatctttac
    17221 ttcctcgaca gcgtaaccat cggttatacc caggcgatgc gcgccgcgca aggtactggc
    17281 gtgaaggtga tcaaacggaa ggtgttcctc gacgattcgc agaacgaagc ggacatccgt
    17341 gtgcaattta atcgcgcaat tgatctggcg cgtcgcaacg gttcaaccat tgccattggg
    17401 catcctcacc cttcaacggt acgcgtgcta caacagatgg tttataacct gccgccagac
    17461 attacgctgg tgaaagccag cagcttgctg aatgaaccgc aggttgatac ttctacaccg
    17521 ccgaaaaacg ctgtgcctga tgcaccgcgt aatccgttcc gtggcgtgaa gctgtgcaaa
    17581 ccgaagaaac cgatagaacc tgtttatgct aatcgcttct ttgaagtatt aagcgaaagc
    17641 atcagccaga gcacgctgat cgtttacttc cagcatcagt ggcaaggctg gggcaaacag
    17701 cccgaagcgg cgaagtttaa cgctagcgca aattaaaggc gctacgcgta atgcgatggt
    17761 gcgaccgcgt tttgtcgcgc cattgccata agcggaaaga ccacagtaac gcctggtaac
    17821 cgaccttcac gctgcgcaca ttggtaatca ggcgcttata cataccggaa gtaaatatct
    17881 cggcaatcat ccgttggcgg gtaagaatat ccggctcttt gcgcaccgca tggcaaacac
    17941 gcaatgcttc gtaagttatt tgctgatgaa attccggata aatcgtaatt ttgtcggcat
    18001 aatttcgatt taatttctcc agcaggcggg taatcttaat atagtgacgt tgataattaa
    18061 ggtttttatt cccttgtcta tgcaaccgac tcactgacgt attatgcaga taatatttat
    18121 ataatgattg ctcggtatat cgcgcacgca gcgcgttaaa catgaattct gttgtccaga
    18181 caatatcctg atgatgtaat ccggcaataa atttaatgtt atttttaaca ataacatcac
    18241 ggcgataaac ccccatccag acaacgtgag tccaacggcg cgaagaaagc cccatccgca
    18301 gccagtccgg gccggttaat acgccggttg agcgaaggcg atcgctgggg atggattgcc
    18361 aggtttctcc cgtttcacga aaacaccagt cagcgttgca ctgcgccacg tcgaggtcat
    18421 cctctaacgc catggtcatc agcgtttcgt acatggtggg atagacctca tcgtcagcat
    18481 cgacaaaagc gacatatttg cccgtcgcca cctcgatccc acgattacgc gctaccgatg
    18541 cgccagcatt cgcctgatgc aacaaacgaa cgtgcggata gttttctgcg taatgctttg
    18601 ctatttcaac agaattatcc gttgaaccat cgttaataat aatgatttcc agagcagtcc
    18661 aggtttgcgt aattaaagat tccatacaag tgcggaaatc atcgcccgca ttatataacg
    18721 gaataataac actaagttta ttggtgctgt tcatcataaa ttaccgacga cctctgaagt
    18781 tatcctgacg ttttacaggc tttgtattaa gaaactatta agcctgtgag atattatttt
    18841 tacaggtgag agagtcactt cagggtagag agataatgag agcagctata taagagatca
    18901 gcgcaattac gatatcttta ttacactgac aggattttac atatttaacg gattatcctc
    18961 aggcaaaagg gctggaatac cagcccttgt tcgtgttaat cccaactcag aattactttc
    19021 ccggactggc ccgaacgcat agcgtcaaag cccttctgga aatcatcaat agagaaacga
    19081 tgggtaatga tcggcgagag atccagacct gactgaatca gcgccgccat cttgtaccag
    19141 gtttcaaaca tctcacgacc gtaaatacct ttaatgaaca agcctttaaa gattactttg
    19201 gtccagtcga tagacatatc ggacggtgga atacccagca tcgcaatgcg accgccgtgg
    19261 ttcatggtgt cgagcatggt acgaaacgct ggcggcgcac cggacatttc cagaccgaca
    19321 tcaaagcctt cggtcatgcc cagttctgcc atcacatcat taaggttttc tttagcgacg
    19381 ttgaccgcac gggtgatacc cattttgcgc gccagttcga gacgatattc gttaacatca
    19441 gtgatcacca cattgcgtgc accaacgtgt ttcgccaccg ccgctgccat aataccaatc
    19501 gggcctgcac cagagaccag cacatcctcg ccaaccagat cgaacgacag cgcggtatgc
    19561 acggcgttac cgaagggatc aaaaatggaa gccaggtcgt cggagatatt gtcggggatt
    19621 ttgaaagcgt tgaacgccgg aatcaccaga tattcggcga agcagcccgg acggttaaca
    19681 ccgacaccaa tggtgttgcg gcacagatgg gtacgaccgc cacgacagtt gcgacagtga
    19741 ccgcaggtga tatggccttc gccagaaacg cgatcgccga ttttgaagcc tttcacttcc
    19801 tgaccaatac ctaccacttc accgacatat tcatggccta cgaccatcgg caccgggatg
    19861 gttttttgcg accactcatc ccagttatag atgtgaacgt cagtcccgca gatggctgtt
    19921 ttacggattt taatcagcag atcgttatgc ccgagttccg gtacaggaac gtcggtcatc
    19981 cagatgccct cttccgcttt cagtttggat aacgctttca tctcacatcc tcaggcgata
    20041 acgcccagtt gtttaccaat acgcgtgaat gcttctactg cacgcgtaat ttgctcaggg
    20101 gtatgcgccg cagacatctg ggtacgaata cgcgcctgac ctttcggaac gaccggatag
    20161 aagaaaccgg tgacgtaaat gccctctttt tgcagctcac gggcaaattt ctgcgccact
    20221 actgcatcgc caagcatgac cggaataatg gcatgatcgg ctcccgccag ggtaaagccc
    20281 gccgccgaca tttgctcacg gaactggcgc gcgttcgccc acagacggtc acgcagttcg
    20341 ctgcccgctt cgaccatctc cagtactttg atggacgcgg caacaatggc cggtgccagc
    20401 gagttggaga acaggtacgg acgagaacgc tggcgcagcc actcaaccac ctctttgcgc
    20461 gccgcggtat aaccaccaga agccccgccc agcgctttac caagcgtacc ggtgataata
    20521 tcgacccggc ccatcacatc gcagtattca tgggaaccac gaccattttc accgacaaaa
    20581 ccgaccgcgt gggagtcatc caccatcacc agggcatcgt atttatctgc cagatcgcaa
    20641 acgcctttca ggttggcaat cacgccgtcc attgagaaca caccatcggt ggcaatcagc
    20701 acatgacgcg caccggcttc acgcgcttct ttcagacgtg cttccagctc ctgcatatcg
    20761 ttgttggcat agcgatagcg tttagctttg cacagacgca caccatcaat aatagacgcg
    20821 tggttcagtg cgtcggagat aatggcgtct tccgcaccca gcagcgtttc aaacagtcca
    20881 ccgttagcat caaagcagga agagtagaga atcgcatctt ccatccccag gaatgccgcc
    20941 agtttttgtt caagctcttt atggctgtcc tgagtgccgc aaataaaacg caccgaagcc
    21001 atgccgaaac cgtgagaatc cattcccgcc tttgctgccg caatcagatc cggatgattc
    21061 gccagcccga gatagttgtt ggcacaaaag ttaatgacgt ggcttccatc agccacagtg
    21121 atatctgctt gctgcgcaga cgtaataatg cgctcttctt taaacaaccc ttccgcccgt
    21181 gcggtttcca gatcgttggt taactgctga taaaattctc cacgcattgc gattctccag
    21241 acagggcaaa ttccagcaca tattacccaa acttataggt cgcgacgaga tgaagcgtta
    21301 acacttctgc aaaattcagg ataaataacg tccatcaata tcacttttgg cgaatggctg
    21361 aagccaacgc cgtgtagtga tatgatagaa gtattcgtgt ctgagattgt ctctgactcc
    21421 ataattcgaa ggttacagtt atgatcatcg ttaccggcgg cgcgggcttt atcggcagca
    21481 acatcgttaa agccctgaat gataaaggca tcaccgatat tctggtggtg gacaacctga
    21541 aagacggcac caagtttgtg aacctggtgg atctgaatat cgcagactat atggataagg
    21601 aagacttcct gatccagatt atggctggcg aagagttcgg cgatgtcgaa gcgattttcc
    21661 acgaaggcgc gtgctcttcc accaccgagt gggacggcaa gtatatgatg gataacaact
    21721 atcaatactc caaggagctg ctgcactact gcctggagcg tgaaatcccg ttcctgtacg
    21781 cttcttccgc agccacctac ggcggacgca cctccgactt tattgaatcc cgcgagtacg
    21841 aaaaaccgtt gaacgtctac ggttactcaa aattcctgtt tgatgaatat gttcgccaaa
    21901 tcctgccgga agcgaactcg cagattgttg gcttccgcta tttcaacgtt tatggaccgc
    21961 gtgaaggcca taaaggcagc atggcgagcg tcgctttcca tctcaacacc cagcttaata
    22021 acggtgaatc accgaagctg ttcgaaggta gcgagaactt taaacgcgac ttcgtctatg
    22081 ttggcgatgt ggcagatgta aacctgtggt tcctggaaaa tggcgtttcc ggcatcttca
    22141 acctcggcac cggtcgtgcg gaatccttcc aggctgtagc tgatgctacg ctggcttatc
    22201 acaagaaagg ccagatcgaa tacattccgt tcccggataa gctgaaaggc cgctaccagg
    22261 cgttcactca ggcagatctg acaaatctgc gcgcggcggg ttacgacaaa ccgttcaaaa
    22321 ccgttgctga aggtgtaacg gaatacatgg cctggctgaa tcgcgacgca taagagctct
    22381 gcatgaaaat actggtgatc ggcccgtctt gggttggcga catgatgatg tcgcaaagtc
    22441 tctatcgcac gctccaggcg cgctatcccc aggcgataat cgatgtgatg gcaccggcat
    22501 ggtgccgtcc attattatcg cggatgccgg aagttaacga agctatccct atgcctctcg
    22561 gtcacggagc gctggaaatc ggcgaacgcc gcaaactggg tcatagcctg cgtgaaaagc
    22621 gctacgaccg cgcctacgtc ttacccaact ccttcaaatc cgcattagtg cctttcttcg
    22681 cgggtattcc tcatcgcacc ggctggcgcg gcgagatgcg ctacggttta ctcaacgatg
    22741 tacgcgtgct cgataaagaa gcctggccgc taatggtgga acgctatgtc gcgctggcct
    22801 atgacaaagg cattatgcgc acagcacaag atctgccgca gccattgtta tggccgcagt
    22861 tgcaggtgag cgaaggtgaa aaatcatata cctgtaatca attttcgctt tcatcagaac
    22921 gtccgatgat tggtttttgc ccgggtgcgg agtttggtcc ggcaaaacgc tggccacact
    22981 accactatgc ggagctggca aagcagctga ttgatgaagg ttatcaggtg gttctgtttg
    23041 gctcggcgaa agatcatgaa gcaggcaatg agattcttgc cgctttgaat accgagcagc
    23101 aggcatggtg tcggaacctg gcgggggaaa cacagcttga tcaagcggtt atcctgattg
    23161 cagcctgtaa agccattgtc actaacgatt ctggcctgat gcacgttgcg gcggcgctca
    23221 atcgtccgct ggttgccctg tatggtccga gtagcccgga cttcacaccg ccgctatccc
    23281 ataaagcgcg cgtgatccgc ctgattaccg gctatcacaa agtgcgtaaa ggtgacgctg
    23341 cggagggtta tcaccagagc ttgatcgaca ttactcccca gcgcgtactg gaagaactca
    23401 acgcgctatt gttacaagag gaagcctgac ggatgcgggt tttgatcgtt aaaacatcgt
    23461 cgatgggcga tgttctccat acgttgcccg cactcactga tgcccagcag gcaatcccag
    23521 aaattaagtt tgactgggtg gtggaagaag ggttcgcaca gattccttcc tggcacgctg
    23581 ccgttgagcg agttattcct gtggcaatac gtcgctggcg taaagcctgg ttctcggccc
    23641 ccataaaagc ggaacgcaaa gcgtttcgtg aagcgctaca agcagagaac tatgacgcag
    23701 ttatcgacgc tcaggggctg gtaaaaagcg cggcgctggt gacgcgtctg gcgcatggcg
    23761 taaagcatgg catggactgg caaaccgctc gcgaaccttt agccagcctg ttttacaatc
    23821 gtaagcatca tattgcaaaa cagcagcacg ccgtagaacg cacccgcgaa ctgtttgcca
    23881 aaagtttggg ctatagcaaa ccgcaaaccc agggcgatta tgctatcgca cagcattttc
    23941 tgacgaacct gcctacagat gctggcgaat atgccgtatt tcttcatgcg acgacccgtg
    24001 atgataaaca ctggccggaa gaacactggc gagaattgat tggtttactg gctgattcag
    24061 gaatacggat taaacttccg tggggcgcgc cgcatgagga agaacgggcg aaacgactgg
    24121 cggaaggatt tgcttatgtt gaagtattgc cgaagatgag tctggaaggc gttgcccgcg
    24181 tgctggccgg ggctaaattt gtagtgtcgg tggatacggg gttaagccat ttaacggcgg
    24241 cactggatag acccaatatc acggtttatg gaccaaccga tccgggatta attggtgggt
    24301 atgggaagaa tcagatggtt tgtagggctc cggggaatga gttgtctcaa ttgacagcaa
    24361 atgctgttaa gcggttcatt gaagaaaacg ctgccatgat ttaaattaca
//
LOCUS       DAPGWB010000066        23896 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.066, whole genome shotgun sequence.
ACCESSION   DAPGWB010000066 DAPGWB010000000
VERSION     DAPGWB010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 23896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23896
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.066"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            30..3763
                     /gene="yfaL"
                     /locus_tag="RHX79_002487"
                     /pseudo
     CDS             30..3763
                     /gene="yfaL"
                     /locus_tag="RHX79_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416736.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AIDA-I family autotransporter adhesin YfaL/EhaC"
     gene            complement(3891..4613)
                     /locus_tag="RHX79_002488"
     CDS             complement(3891..4613)
                     /locus_tag="RHX79_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-demethylubiquinone
                     3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol
                     methylase"
                     /protein_id="HDV2197643.1"
                     /translation="MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLR
                     LGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESG
                     IQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTL
                     NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNP
                     LTNTFKLGPGVDVNYMLHTQNK"
     gene            4760..7387
                     /gene="gyrA"
                     /locus_tag="RHX79_002489"
     CDS             4760..7387
                     /gene="gyrA"
                     /locus_tag="RHX79_002489"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDV2197644.1"
                     /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMP
                     TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFP
                     TAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEK
                     IAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM
                     VALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDP
                     IIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYL
                     TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL
                     VREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKG
                     KSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLP
                     LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDEL
                     IGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG
                     DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMI
                     TDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAA
                     EGDDEIAPEVDVDDEPEEE"
     gene            7536..9224
                     /locus_tag="RHX79_002490"
     CDS             7536..9224
                     /locus_tag="RHX79_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2138 domain-containing protein"
                     /protein_id="HDV2197645.1"
                     /translation="MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSP
                     LVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIE
                     GSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPL
                     LFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFK
                     DDQQDTEATAIAGDLLSGKKRWQASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMP
                     SFAGVRFEMGNDGWHSFVALNDESASVDTSFDFTPVWNSMPAGASFCVVVPYSHGIAE
                     EMLSHISQENDKLNGALDGAAGLCWYADSKLQTPLFVGQFDGTAEQAQLPGKLFTQNI
                     GAHESKAPEGVLPVSQTQQGEGQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLA
                     MQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGVAKLLRNETLT
                     SLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL"
     gene            9221..9844
                     /locus_tag="RHX79_002491"
     CDS             9221..9844
                     /locus_tag="RHX79_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311139.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1175 domain-containing protein"
                     /protein_id="HDV2197646.1"
                     /translation="MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQ
                     GPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGFSSQYLPPEMTLTPGQRQLAQNW
                     NQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYH
                     TGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR"
     gene            9868..14382
                     /locus_tag="RHX79_002492"
     CDS             9868..14382
                     /locus_tag="RHX79_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000536590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HDV2197647.1"
                     /translation="MGTGLANADDSLPSSNYAPPAGGTFFLLADSSFSSSEEAKVRLE
                     APGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWL
                     WDNWYGKSRRVMQRTFSSQSRQNVTQALPELHLGNAIIKPSRYVQNNQFSPLKKYPLV
                     EQFRYPLWQAKPVEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYR
                     ATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGT
                     LQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKV
                     MGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVDVTLDARNGGQGSFRLPENAVAGG
                     YELRLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVK
                     NARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLL
                     TVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVT
                     YEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGST
                     AHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTL
                     QRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTH
                     YQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRT
                     SSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKA
                     YFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAG
                     LFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQV
                     QDSISTKLSFVDNSWPVEQQKNVMLGGGENALMLPEQASNIRLQSSETPQEIFRNNLD
                     ALVDGPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGAR
                     FTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRA
                     LVLAWAQEMNLPCKTLLKGLDEAIARRGTKDEDFSEEDIRDINDSLILDTPESPLADA
                     VANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAIL
                     SGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVP
                     DILSFGDELSPQNVQVRWREPAKMAQQSNIPVTVERQLYRLIPGEEEMSFILQPVTSN
                     EIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQL
                     LEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAA
                     GSEWTGMQVK"
     gene            14383..16032
                     /locus_tag="RHX79_002493"
     CDS             14383..16032
                     /locus_tag="RHX79_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfaQ family protein"
                     /protein_id="HDV2197648.1"
                     /translation="MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGV
                     TKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRD
                     TALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLA
                     TLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTD
                     GTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKST
                     TAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDRE
                     AKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWT
                     QDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRS
                     TCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRN
                     FFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD"
     gene            16037..16813
                     /locus_tag="RHX79_002494"
     CDS             16037..16813
                     /locus_tag="RHX79_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfaP family protein"
                     /protein_id="HDV2197649.1"
                     /translation="MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASF
                     SQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRVESDGSF
                     ARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHV
                     VTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETE
                     LTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW"
     gene            17088..19937
                     /gene="rcsC"
                     /locus_tag="RHX79_002495"
     CDS             17088..19937
                     /gene="rcsC"
                     /locus_tag="RHX79_002495"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416722.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RcsC"
                     /protein_id="HDV2197650.1"
                     /translation="MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQR
                     ESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAF
                     EPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGL
                     RDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANR
                     LQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSW
                     FGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLA
                     RMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLN
                     MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRV
                     KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLV
                     TAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
                     LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDT
                     GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGS
                     QFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQE
                     PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARI
                     YLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND
                     GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRC
                     LESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES"
     gene            complement(20137..20787)
                     /gene="rcsB"
                     /locus_tag="RHX79_002496"
     CDS             complement(20137..20787)
                     /gene="rcsB"
                     /locus_tag="RHX79_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsB"
                     /protein_id="HDV2197651.1"
                     /translation="MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN
                     LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD
                     IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR
                     LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD"
     gene            complement(20804..23476)
                     /gene="rcsD"
                     /locus_tag="RHX79_002497"
     CDS             complement(20804..23476)
                     /gene="rcsD"
                     /locus_tag="RHX79_002497"
                     /EC_number="2.7.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase RcsD"
                     /protein_id="HDV2197652.1"
                     /translation="MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNA
                     WLKDKSYQIVDITHAIQKRVDTWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYL
                     EKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLIST
                     LPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTT
                     FNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDTTATGDNDNEKEGTDSVSIHFNS
                     TKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFS
                     SRSTESLPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHL
                     NLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQ
                     AQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDE
                     IQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGD
                     RDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLH
                     FPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPE
                     VEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNP
                     SNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLG
                     GDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPG
                     KQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL"
BASE COUNT         5806 a         5821 c         6543 g         5726 t
ORIGIN      
        1 gtcttatata aaatgatggt cagattaata tgcggattat ctttctacgc aaggagtatt
       61 tatctctact cccgtcaatg attgcatctc ttttctctgc taacggtttc gcggcggcca
      121 ttgatttatg ccagggatat gatatcaaag cgagttgtca cgccagcagg caaagccttt
      181 caggcattac gcaggactgg agtgtcgccg atgggcaatg gctggttttt tcggatatga
      241 ccaataacgc cagcggagga gccgtatttt tgcaacaagg agcggaattt tcactattac
      301 cagaaaatga aactggaatg actctgtttg ccaataacac cgttacagga gaatataata
      361 acggcggggc catatttgct aaagaaaact caacgctgaa tcttactgat gttatttttt
      421 ccggtaacgt cgcaggcggc tatggtggcg caatctattc ttctggtact aatgatactg
      481 gtgccgtcga tttacgtgtc actaacgcca tgtttcgcaa taatatcgct aatgatggca
      541 aaggtggcgc aatttatacc attaataatg acgtctattt aagtgatgtt atttttgata
      601 acaaccaggc atatacatca acaagttaca gtgatggcga tggcggggca atcgatgtta
      661 ccgataataa tagcgacagc aagcatcctt caggttatac gataataaat aacactgcct
      721 ttacaaataa cactgccgaa ggttatggcg gggcgatata taccaatagc gcgacggctc
      781 cctatcttat tgatatttct gttgatgaca gctacagcca gaacggcggc gtgttagtgg
      841 atgagaacaa cagcgcagca ggctatggag atggtccttc cactgcggcg ggtggcttta
      901 tgtatctcgg cttaagtgaa gttacctttg atattgccga cggaaaaacg ctggttattg
      961 gcaatacaga gaatgacgga gctgttgact ctattgctgg taccgggttg atcaccaaaa
     1021 caggttccgg cgatctggta cttaatgcag ataacaatga ctttactggt gagatgcaga
     1081 ttgaaaacgg tgaagttacc ctgggtcgca gcaactccct gatgaatgtc ggcgatacgc
     1141 attgccagga cgatccgcaa gactgctacg gtctgacgat agggagtatt gataagtacc
     1201 agaatcaggc agagctaaac gttggctcca cccaacaaac ctttgtgcac tcattgacgg
     1261 gctttcagaa tggcacttta aatatcgatg ctggtggcaa tgttactgtt aatcaaggca
     1321 gttttgctgg caccatcgaa ggtgctggtc agctcaccat tgcgcaaaac ggcagctacg
     1381 tgctgtcggg ggcgcagtcg atggcgctaa ccggcgatat agtcgttgat gatggtgcgg
     1441 tgctttcgct ggaaggcgac gcggcagatc ttaccgcctc caggacgatc cgcagtcgat
     1501 cgtgttaaac ggcggtgtgc tcgatctctc tgatttctcc acctggcaga gtggcacatc
     1561 atacaacgat ggccttgaag tcagcggcag cagcggaacg gttatcggca gtcaggatgt
     1621 ggtagatctt gcaggtggaa acgatatgca tatcggcggt gacgggaaag atggcgtcta
     1681 cgtggtggtc gatgcgggcg acgggcaggt aagtctggca aacaataata gttatttggg
     1741 cacaacacaa atcgcctccg gtatgctgga ggtgagcgac aactcacagc ttggagatac
     1801 ccactataac cgccaggtta tctttaccga taagcaacaa gaaagcgtga tggagattac
     1861 tgccaatgtc gatactcgct ctacgacgac tgagcatggg cgtgatattg aaatgcgcgc
     1921 cgacggtgaa gtggcagttg atgcgggggt agacacgcag tggggcgcac tgatggctga
     1981 cagcagcggg cagcatcagg atgagggtag cacattgact aaaacggggg cgggtacgct
     2041 ggagctgacc gccagcggta caacgcagtc ggcggtacgt gtcgaagaag gcaccctgaa
     2101 aggcgatgtc gcggatatcc ttccttatgc ttcgtcactg tgggtcggtg atggggcgac
     2161 gttcgttact ggcgcggatc aggatattca gtctatcgat gctacttcca gcggcactat
     2221 cgatatcagc gatggtacgg ttttgcgtct gaccgggcag gatacttccg tcgcccttaa
     2281 tgcctcattg tttaacggcg atgggacgct ggtgaatgct accgatggcg tgacgttgac
     2341 aggtgagctt aataccaacc ttgaaactga cagcctgacc tatcttgccg acgtgacggt
     2401 taatggtgat ctgaccaata cgtccggtgc ggttagcctg caaaatggcg tcgctggcga
     2461 tacgctgacg gtaaacggtg attataccgg cggcggtacg ctactgttcg acagcgaatt
     2521 aaacggcgat gactcggtaa gcgatcaatt ggtgatgaac ggtaatactg ctggcaacac
     2581 aactgtggtg gttaactcca ttacagggat tggtgagccg acatcgacag gcattaaagt
     2641 ggttgatttc gcagctgctc ccacgcagtt tcaaaacaat gcacagttca gtttggctgg
     2701 cagtggctac gtcaacatgg gagcgtatga ctacacgcta gtggaagata acaacgactg
     2761 gtatctgcga tcgcaagaag taacgccgcc atcgccacct gatccagacc ctgacccaac
     2821 acccgatcct gacccaacac ccgatccaat ccccgcttac cagccggtgc tgaatgccaa
     2881 agttggcggt tatctcaata atctgcgggc ggcaaatcag gcgtttatga tggagcgacg
     2941 cgatcatgca ggtggcaatg gtcagacgct gaatttacgt gttatcggcg gacgttatca
     3001 ttacacggcg gcagggcaac tggctcagca tgaagacact tctacggtgc agcttagcgg
     3061 tgacctgttt agcgggcgct ggggcgatga tggcgagtgg atgcttgggg cggttggtgg
     3121 ctacagtgat aatcagggcg agagccgctc gaatatgacc ggaactcgcg ccgataacca
     3181 gaaccacggt tatgccgttg ggctgacctc aagctggtat cagcacggta atcagaagca
     3241 gggggcctgg ctggatagct ggctgcaata cgcgtggttt aacaatgatg tttccgaaca
     3301 agacgatggc acagatcatt accactcgtc ggggattatc gcctcgctgg aagccgggta
     3361 tcagtggtta ccggggcgtg gtgtggtgat tgaaccgcag gcgcaggtga tttatcaggg
     3421 cgtgcagcag gatgatttta ccgccgctaa ccatgcgcgc gtgtcacaat cgcaggggga
     3481 tgatattcag acgcggctgg gtttacacag cgaatggcgt accgcggttg gtgtcacacc
     3541 aacattagat ctgaattatt atcacgatcc ccatgcgacg gaaattgaag aagatggcag
     3601 cactatcagt gacgatgcgg tgaagcgacg gggtgaaata aaagtgggag tcacgggcaa
     3661 tatcagtcag cgagtgtccc tgcgcggcag cgtggcgtgg cagaaaggga gtgatgattt
     3721 tgcccagacg gcagggtttt tgtcgatgac ggtgaaatgg taatcactgt ctagtcggca
     3781 cggttgccgg atgcggcgta aacgccttat ccggcctacg gggagcattt gtaggcctga
     3841 taagacgcgg caagcgtcgc atcaggcatt ggctcggcca aacaacaacc tcacttattc
     3901 tgcgtgtgca gcatatagtt cacatccacg ccggggccga gtttaaaagt attagtgagc
     3961 gggttgtaat gtagcccggt tatatgtcgc tctttaaggc ttgtctgatc tacccagcca
     4021 agcagttctg ccggtttaat aaacttcttc acatcatgcg tgcctttggg caccatgcgc
     4081 aaaatatatt ccgcgccaac caccgccatc agccatgact tgccgttgcg gttaagcgtc
     4141 gagaaaaaga catcgccgcc tggtttcacc agttgcgcac aggctctgac cactgactgc
     4201 ggatcgggga cgtgctccag catctccatg caggtcacca catcatactg cccggcatgt
     4261 tttgccgcgt gctcttccac ggtttcctgc acataatcca cctgaatgcc gctttccagc
     4321 gcgtgcagtt ttgccacctg caatggctca aagcccatat ccagaccggt caccgtcgcg
     4381 ccttcgcgcg ccatactctc ggccagaatg ccgccgccac aaccgacatc gagcaccttt
     4441 ttgccaaata aaccgccagc acgctcggca atatagccca gacgcagcgg gttaatgcgg
     4501 tgcaacggtt tgaactcacc ttcaagatcc caccagcggg aggcgacggc ttcaaattta
     4561 gcgatctctt cgtggtctac gttatggttt tccggcgatt tttcggcatt cattggcact
     4621 tctactccgt aattggcaag acaaacgagt atatcaggca ttggatgtga ataaagcgta
     4681 taggtttacc tcaaactgcg cggctgtgtt ataatttgcg acctttgaat ccgggataca
     4741 gtagagggat agcggttaga tgagcgacct tgcgagagaa attacaccgg tcaacattga
     4801 ggaagagctg aagagctcct atctggatta tgcgatgtcg gtcattgttg gccgtgcgct
     4861 gccagatgtc cgagatggcc tgaagccggt acaccgtcgc gtactttacg ccatgaacgt
     4921 actaggcaat gactggaaca aagcctataa aaaatctgcc cgtgtcgttg gtgacgtaat
     4981 cggtaaatac catccccatg gtgactcggc ggtttatgac acgatcgtcc gtatggcgca
     5041 gccattctcg ctgcgttaca tgctggtaga cggtcagggt aacttcggtt ccatcgacgg
     5101 cgactctgcg gcggcaatgc gttatacgga aatccgtctg gcgaaaattg cccatgaact
     5161 gatggccgat ctcgaaaaag agacggtcga tttcgttgat aactatgacg gcacggaaaa
     5221 aattcccgac gtcatgccaa ccaaaattcc taacctgctg gtgaacggtt cttccggtat
     5281 cgccgtaggt atggcaacca acatcccgcc gcacaacctg acggaagtca tcaacggttg
     5341 tctggcgtat atcgatgatg aagacatcag cattgaaggg ctgatggaac acatcccggg
     5401 gccggacttc ccgacggcgg caatcattaa cggtcgtcgc ggtattgaag aagcttaccg
     5461 taccggtcgc ggcaaggtgt atattcgcgc tcgcgcagaa gtggaagttg acgccaaaac
     5521 cggtcgtgaa accattatcg tccacgaaat tccgtatcag gtaaacaaag cgcgcctgat
     5581 cgagaagatt gcggaactgg taaaagaaaa acgcgtggaa ggcatcagcg cgctgcgtga
     5641 cgagtctgac aaagacggta tgcgcatcgt gattgaagtg aaacgcgatg cggtcggtga
     5701 agttgtgctc aacaacctct actcccagac ccagttgcag gtttctttcg gtatcaacat
     5761 ggtggcattg caccatggtc agccgaagat catgaacctg aaagacatca tcgcggcgtt
     5821 tgttcgtcac cgccgtgaag tggtgacccg tcgtactatt ttcgaactgc gtaaagctcg
     5881 cgatcgtgct catatccttg aagcattagc cgtggcgctg gcgaacatcg acccgatcat
     5941 cgaactgatc cgtcatgcgc cgacgcctgc agaagcgaaa actgcgctgg ttgctaatcc
     6001 gtggcagctg ggcaacgttg ccgcgatgct cgaacgtgct ggcgacgatg ctgcgcgtcc
     6061 ggaatggctg gagccagagt tcggcgtgcg tgatggtctg tactacctga ccgaacagca
     6121 agctcaggcg attctggatc tgcgtttgca gaaactgacc ggccttgagc acgaaaaact
     6181 gctcgacgaa tacaaagagc tgctggatca gatcgcggaa ctgttgcgta ttcttggtag
     6241 cgccgatcgt ttgatggaag tgatccgtga agagctggag ctggttcgtg aacagttcgg
     6301 tgacaaacgt cgtactgaaa tcaccgccaa cagcgcagac atcaacctgg aagatctgat
     6361 cactcaggaa gatgtggtag tgacgctctc tcaccagggc tacgttaagt atcagccgct
     6421 ttctgaatac gaagcgcagc gtcgtggcgg gaaaggtaaa tctgccgcac gtattaaaga
     6481 agaagacttt atcgaccgac tgctggtggc gaacactcac gaccatattc tgtgcttctc
     6541 cagccgtggt cgcgtctatt cgatgaaagt ttatcagttg ccggaagcca ctcgtggcgc
     6601 gcgcggtcgt ccgatcgtca acctgctgcc gctggagcag gacgaacgta tcactgcgat
     6661 cctgccagtg accgagtttg aagaaggcgt gaaagtcttc atggcgaccg ctaacggtac
     6721 cgtgaagaaa actgtcctca ccgagttcaa ccgtctgcgt accgccggta aagtggcgat
     6781 caaactggtt gacggcgatg agctgatcgg cgttgacctg accagcggcg aagacgaagt
     6841 aatgctgttc tccgctgaag gtaaagtggt gcgctttaaa gagtcttctg tccgtgcgat
     6901 gggctgcaac accaccggtg ttcgcggtat tcgcttaggt gaaggcgata aagtcgtctc
     6961 tctgatcgtg cctcgtggcg atggcgcaat cctcaccgca acgcaaaacg gttacggtaa
     7021 acgtaccgca gtggcggaat acccaaccaa gtcgcgtgcg acgaaagggg ttatctccat
     7081 taaggttact gaacgtaatg gtttagtggt tggcgcggta caggtagatg actgcgacca
     7141 gatcatgatg atcaccgatg ccggtacgct ggtacgtact cgcgtttcgg aaatcagcat
     7201 cgtaggccgt aacacccagg gcgtgatcct catccgtact gcggaagatg aaaacgtagt
     7261 gggtctgcaa cgtgttgctg aaccggttga cgaggaagat ctggatacca tcgatggcag
     7321 tgccgcggaa ggggacgatg aaatcgctcc ggaagtggac gttgacgacg agccagaaga
     7381 agaataattt tacttcttca tgccaaaagg gagctatctc ccttgtttga attgaaaagt
     7441 ccaggctgca aagtctgggc ttttgtcgta ttagggcacg gtaaagtttg gctgtgcccg
     7501 taaaaaatgg ctggctatac acaaggaatg tggcaatgag tggtgaaaaa aaggcgaaag
     7561 gctggcggtt ctatggtctt gtaggttttg gcgcaatagc actgctttcc gctggcgtct
     7621 gggcgttgca atatgctggc agtgggccag aaaaaacgtt gtcgccgctg gtggtgcaca
     7681 acaatctgca aatcgatctc aatgagccgg acctctttct cgacagcgac tctctgagcc
     7741 agcttcccaa agatctcctc accattccgt ttctccacga tgttctgagc gaagatttcg
     7801 ttttctatta tcagaatcat gccgatcgtc tgggcattga aggcagcatt cgtcgtattg
     7861 tctatgaaca cgatctcacg ctgaaagata agctcttttc gtcactctta gatcagcccg
     7921 cgcaggcagc gctgtggcac gataaacaag gccatctttc acattatatg gtgctgatcc
     7981 agcgcagtgg tttaagcaaa ctgctggagc cattgttgtt tgccgctacc agcgacagcc
     8041 agttaagcaa aacggaaatc agtagcatca agataaatag tgaaactgtt cctgtttatc
     8101 agttgcgcta taacggcaat aacgccctga tgttcgcgac ttatcaggac aagatgctgg
     8161 tgttttccag cacggatatg ttgtttaaag atgatcagca ggataccgaa gccacggcga
     8221 tcgcaggtga tttgttgagc ggcaaaaaac gctggcaagc aagctttggc ctggaagagc
     8281 gtgctgctga aaaaacgcca gtacgccagc gcatcgtggt cagcgccagg ttgctgggtt
     8341 ttggctacca gcggttaatg ccttcttttg ctggcgtacg cttcgaaatg ggtaacgacg
     8401 gctggcacag ttttgtggcg ttaaatgatg aatccgccag cgtagatacc agtttcgatt
     8461 ttacgccggt ctggaacagt atgcctgccg gggccagctt ctgtgtggtg gtgccgtatt
     8521 cacacggtat tgccgaagag atgctttcgc acatcagtca ggaaaacgac aagttgaatg
     8581 gggcgttaga cggtgccgcg gggctgtgct ggtatgcaga ctcaaaattg caaaccccgc
     8641 tgtttgtcgg tcagtttgat ggcactgccg aacaggcgca attgccaggg aaactgttta
     8701 cgcaaaatat tggtgcgcac gaaagcaaag cgccagaagg tgttttgccg gtaagccaga
     8761 ctcagcaggg cgaagggcaa atctggcgtc gcgaagtgag ttcccgatac ggccagtatc
     8821 cgaaagcgca ggcggcgcaa cccgatcaat taatgtcgga ttattttttc cgcgtgtcgc
     8881 tggcgatgca aaacaaaacg ctgcttttct ccctcgatga cacgctggtt aataacgcgc
     8941 tgcaaacact gaataaaacc cgcccggcaa tggtggatgt aatacccact gatggcatcg
     9001 ttccgctcta tatcaatcca caaggcgtgg cgaaactgct gcgtaacgaa acgttgacca
     9061 gtctgccgaa gaatctcgaa ccggtttttt ataacgccgc acaaacttta ttaatgccga
     9121 agctggacgc tttatctcaa caaccgcgtt atgtcatgaa gctggcccag atggaacccg
     9181 gtgccgcctg gcagtggcta cccataacct ggcagccgct atgaggcacg ggctgctggc
     9241 gctgatttgc tggctgtgtt gtgttgttgc ccatagcgaa atgctgaatg tcgaacaatc
     9301 cgggctgttt cgcgcctggt ttgtacgcat tgcacaagaa cagctccgcc aggggccaag
     9361 tccacgctgg tatcagcagg attgtgcggg cctggtgcga tttgcggcga acgagacgct
     9421 gaaagttcac gatagtaaat ggctaaaaag taacggtttc tctagccagt atttgccgcc
     9481 agagatgacg ctaacacctg gacagcgtca actggcgcaa aactggaatc aggggaacgg
     9541 gaaaaccggc ccctacgtga ccgcgattaa tttgattcag tacaacagcc agtttattgg
     9601 ccaggacata aaccaggcgc tgcctggcga tatgattttt ttcgatcagg gcgatgccca
     9661 gcacttaatg gtctggatgg ggcgttacgt catctaccac accggaagcg ccacgaaaac
     9721 tgacaacgga atgcgcgcag tcagtctgca acaacttatg acatggaagg acacccgatg
     9781 gatacccaac gattccaatc ccaatttcat tggcatttat cgtttaaatt ttctggcgcg
     9841 atagcagcgt gcttgtccct gtctcttgtg ggaacagggc ttgctaatgc tgatgattcg
     9901 cttccttcca gtaactatgc gccgcccgcc gggggaacat tctttttgct tgctgacagc
     9961 agttttagca gcagtgaaga ggcgaaagtg cgactggaag cgccggggcg tgattatcgg
    10021 cgctatcaga tggaagagta cggcggcgtg gacgttcgcc tgtatcgtat tcctgacccg
    10081 atggcatttt tgcgccagca gaaaaacctg catcgcattg tggtgcaacc gcaatatctg
    10141 ggcgacgggc tgaacaatac gctgacctgg ctgtgggata actggtacgg caaatctcgc
    10201 cgcgtaatgc agcgtacttt ctcttctcag tcacggcaga atgtgactca ggcattaccc
    10261 gaattacatc tcggcaatgc cattattaaa ccttcccgtt atgtacagaa caaccagttt
    10321 tccccgctga aaaaatatcc cttggtggaa cagttccgtt atccactatg gcaggctaaa
    10381 ccggtcgagc cgcagcaagg ggtaaaactg gaaggcgcat ccagcaattt catctcgccg
    10441 cagccgggta acatttatat tcctctcggc caacaagagc cgggactgta cctcgtcgag
    10501 gcgatggttg gtgggtatcg ggcgacgacg gtggtgtttg tttccgatac cgtggcgctt
    10561 agcaaagtgt caggcaacga gcttctggtg tggaccgcgg gtaaaaaaca gggtgaagcg
    10621 aagcccggct cagagatctt gtggactgac ggtcttggcg tgatgacccg cggtgtgacc
    10681 gatgacagcg gtaccttgca gttacaacat atatcgccag aacgttcata cattctgggt
    10741 aaggatgctg aaggcggtgt ttttgtctcc gagaacttct tctacgaaag cgaaatctac
    10801 aacacccgct tgtatatttt taccgatcgc ccgctatatc gcgcaggcga tcgtgtcgat
    10861 gttaaagtga tgggccgcga gttccacgat ccgttgcatt catcccccat cgtcagcgcc
    10921 ccggcgaagc tttcggtgct ggacgctaac ggcagtctgt tgcaaaccgt cgatgtcacg
    10981 ctggatgcgc gcaatggcgg gcagggaagt ttccgcctgc cagaaaatgc cgttgccgga
    11041 ggttatgagt tacgtcttgc ttaccgcaat caggtctata gcagcagttt tcgcgtggca
    11101 aactacatca agccacattt cgagattggt ttagctctcg acaaaaaaga gttcaaaact
    11161 ggcgaagcgg tcagcggcaa actgcaactg ctctacccgg atggcgagcc ggtaaaaaat
    11221 gcccgcgtgc agttaagttt gcgcgctcag caattatcaa tggtcggtaa cgatttgcgt
    11281 tatgccggac gtttccccgt gtcgctggaa ggcagcgaaa cggtgtccga cgccagcggt
    11341 catgtggcgt taaatctccc cgccgccgat aaaccgagcc gttatttgtt aaccgtctcc
    11401 gccagtgacg gcgcggcgta tcgtgtcacc accaccaaag agatcctcat tgaacgcggt
    11461 ctggcgcatt actcattaag tactgccgca caatacagta atagcggcga gtcggttgtg
    11521 ttccgttatg ccgcgctgga atcttcaaaa caggttcctg ttacgtatga atggttgcgt
    11581 ctcgaagacc gcacgagcca tagcggagag ctaccgtcag gcggcaaatc ctttaccgtc
    11641 aatttcgcta aacctggcaa ctacaatctg acattacgcg ataaagacgg cttaattctc
    11701 gctgggttaa gtcatgccgt cagcggtaag ggcagcacgg cgcatactgg tacggtagat
    11761 atcgtggcgg ataaaacgct gtaccagcca ggcgaaactg cgaagatgct gattaccttt
    11821 ccggagccaa ttgatgaagc attattgacg ctggaacgcg atcgcgtgga acagcagtcg
    11881 ctgctttcgc atccggcaaa ctggctgacg ttacaacgtt taaacgatac ccagtatgaa
    11941 gcccgggttc cagtgagcaa ttcctttgcg cctaacatca ctttttcggt gctgtatacc
    12001 cgtaatggtc agtacagttt tcagaacgcc gggatcaaag ttgccgttcc tcagcttgat
    12061 atccgggtga aaacggacaa aacccattac cagcctggtg aactggtcaa tgtcgaatta
    12121 acctcgtcgc tgaaaggtaa acctgtttct gcgcagctaa cggtaggcgt ggtcgatgaa
    12181 atgatctacg cgctgcaacc agaaatcgcg ccgaatatcg gcaaattttt ctatccgctg
    12241 gggcgtaaca atgtgcgtac cagctccagt ctgtcgttta tcagctacga ccaggcgctc
    12301 tccagcgagc cggttgcgcc tggcgcaact aaccgcagcg agcggcgagt aaaaatgctt
    12361 gaacgtccac ggcgtgaaga ggtggatacc gcggcatgga tgccgtcact cacaaccgat
    12421 aaacaaggca aagcgtattt cacgttcctg atgcctgatt cgttaacccg ctggcgtatc
    12481 accgcgcgtg ggatgaacgg cgacgggctg gtcgggcagg ggcgtgctta tctgcgttcg
    12541 gaaaaaaatc tctacatgaa gtggagtatg ccaacggtgt atcgcgtggg cgacaaaccg
    12601 gcggcaggac tgtttatctt cagtcagcag gataacgaac cggtggcgct ggtgactaaa
    12661 tttgcaggcg ctgagatgcg ccagacgctg acgctgcaca aaggggcgaa ttatatttcg
    12721 ctgacgcaga acattcagca atctggcttg ttaagtgcag aactgcaaca aaatgggcaa
    12781 gtgcaggaca gcattagcac aaaactgtct tttgtggaca acagctggcc cgttgaacag
    12841 cagaaaaatg tcatgctcgg cggtggcgag aacgcgctga tgttgcccga gcaggcgagt
    12901 aatatccggc tacaaagtag tgaaacgccg caggagattt tccgcaacaa tcttgatgcg
    12961 ttagtcgatg gaccatgggg tggcgtgatc aacaccggta gccgtctgat cccgctcagt
    13021 ctcgcctggc gttcgcttgc cgatcatcaa agtgccgccg ctaacgacat tcgtcagatg
    13081 attcaggata accgtctgcg gctgatgcaa ctggcggggc ccggagcgcg ctttacctgg
    13141 tggggtgaag atggcaatgg tgacgccttc cttacggcat gggcatggta cgccgactgg
    13201 caggccagcc aggcgctcgg cgtaacgcaa caaccggaat actggcagca tatgctcgac
    13261 agttatgccg agcaggcgga taacatgccg ttattgcatc gggcgctggt gctggcgtgg
    13321 gcacaggaga tgaatctgcc gtgcaaaacg ttgttgaaag ggttggatga agctatcgcc
    13381 cggcgcggaa ctaaagatga agatttctct gaggaagaca tccgcgatat caatgacagc
    13441 ctgatcctcg atacaccgga atctccactg gcagatgcgg tggcaaacgt cttaaccatg
    13501 acgttgctga aaaaagcgca gttgaagtcc acggtgatgc cacaggttca gcaatatgcg
    13561 tgggataaag cggcaaacag caatcagccg ctggcgcaca cggttgtgct gctcaatagc
    13621 ggtggtgacg ctacccagac ggccgctatt ttaagtggtt tgaccgctga gcaatccact
    13681 attgagcgcg cgctggccat gaactggctg gcgaaatata tggcgacaat gcctccagtt
    13741 gttttgcctg cgcctgcggg cgcatgggct aaacataagt taactggagg gggcgaagac
    13801 tggcgttggg ttggtcaggg cgtgccggac attctctctt ttggtgacga attatcgccg
    13861 caaaatgtgc aggtccgctg gcgtgagccg gcaaaaatgg ctcaacaaag taacattccg
    13921 gtgaccgttg aacgccagtt gtatcggctt atccctggtg aagaagagat gagctttatt
    13981 ctgcaaccgg tgaccagcaa tgagattgac agcgatgcgc tgtatctcga tgaaattacg
    14041 cttaccagcg agcaggatgc agttctgcgc tatggtcagg tggaagtacc gctcccgccg
    14101 ggagccgacg ttgagcgcac aacatggggc atttcagtca ataaacccaa cgccgcgaaa
    14161 cagcaggggc aattgctgga aaaagcgcgt aatgaaatgg gcgaactggc ctatatggtg
    14221 ccggtgaaag aactgacggg aacggtcact ttccgccatt tgctgcgctt ctcgcaaaaa
    14281 gggcaattcg ttctgcctcc tgctcgttat gtgcgttcct atgcacctgc gcagcaaagt
    14341 gttgcggcag ggagtgaatg gaccgggatg caggtgaaat aagtgaactg gcgcagaatc
    14401 gtctggctat tggcgttggt tactctgcca acgcttgcgg aggagacgcc gttacaactg
    14461 gtgctgcgcg gtgcgcagca cgatcaactg tatcagctgt cgtcatcagg cgtgaccaaa
    14521 gtctcagcat tacctgactc gctcaccacg ccgttaggga gtttgtggaa actgtatgtt
    14581 tacgcctggc tggaggatac ccatcaaccg gagcagccct accagtgtcg cggaaactcc
    14641 ccggaagagg tttattgttg tcaggctggg gagagcataa cgcgcgatac cgcgctggta
    14701 cgttcctgtg ggctctattt tgcgccgcag cggttgcata ttggcgcaga tgtgtggggg
    14761 caatactggc aacagcgtca ggcacctgcg tggttagcgt ctcttacaac gctgaagcca
    14821 gaaacctcgg taacggttaa atcgctgctc gattcattag cgacgttacc tgcgcaaaac
    14881 aaagctcagg aagtcttact ggatgtggtg ctggacgagg cgaaaatcgg tgtcgcatcc
    14941 atgctcggta gtcgggtacg ggtgaaaacc tggagctggt ttgccgatga taaacaggaa
    15001 atccgccagg gtggttttgc tggctggtta accgatggta caccgctgtg ggttactggc
    15061 agtggcacca gcaaaacggt actaacccgt tatgcgacgg tgcttaatcg ggttttgcca
    15121 gtgccgacgc aggttgccag tgggcaatgt gtagaggtgg agctgtttgc ccgctatccg
    15181 ctgaagaaaa tcacagcgga aaagagtacg acggcagtaa aacccggcgt acttaatggg
    15241 cgctatcgtg tgacgtttac taatggtaac cacattacgt ttgtcagcca cggtgagacg
    15301 accttactga gcgaaaaggg caaactgaaa ttgcagtcgc atctcgatcg tgaagagtac
    15361 gttgccagag ttctggatcg cgaggcgaaa agtacgcccc ctgaggcagc gaaagccatg
    15421 accgtggcga ttcgcacttt tttacagcaa aacgccaatc gggaaggcga ttgcctgacc
    15481 atccccgaca gcagcgccac gcagcgtgtt tctgcttcgc cagcgaccac gggggcgcga
    15541 acgatgaccg cctggacgca ggatctcatc tatgcaggcg atccggttca ttatcatggc
    15601 agtcgcgcta ccgaagggac actttcctgg cggcaagcca cggcccaggc ggggcagggg
    15661 gagcgttacg accagatact cgcgtttgct tatcccgaca acagccttag ccgctgggga
    15721 gctccacgct caacctgcca gttattaccc aaagcgaaag cctggctggc gaaaaaaatg
    15781 ccgcagtggc ggcgtatatt acaaggcgag acggggtaca acgaaccaga cgtgtttgcg
    15841 gtctgtcgtt tagtctcagg tttcccctat accgatcggc agcagaaacg gctgtttatt
    15901 cgtaacttct ttacgcttca ggatcggctg gatttaaccc atgagtatct gcacctggcc
    15961 tttgatggtt atcccaccgg gcttgatgag aactatatcg aaacgctgac ccgacaatta
    16021 ttaatggact aatgctatgc gaaagatttt tcttccgttg ttactggtgg cactttcgcc
    16081 tgtcgctcac agtgaaggtg tgcaggaagt cgagattgac gcaccgctct ctggctggca
    16141 tccggcagag ggcgaagatg ccagtttttc acaatcgatc aattacccgg cgtcgtccgt
    16201 caacatggca gatgatcaaa atatctcagc gcagatccgc ggcaaaataa agaattatgc
    16261 tgcggcgggt aaagttcagc agggccggct ggtggtcaac ggtgccagta tgccgcagag
    16321 agttgaatcc gatggttcat ttgcacgccc ttatattttc actgaaggca gcaacagcgt
    16381 gcaggtcatc agcccggatg ggcaaagccg acaaaaaatg cagttttact caacgccggg
    16441 tacaggaacg attcgtgcac gtttacggct ggttctctcg tgggatacgg acaataccga
    16501 tctcgatctc catgttgtca cgcccgatgg cgaacacgcc tggtacggta acaccgtgct
    16561 gaaaaacagt ggtgcactgg atatggatgt cacgacgggg tacggacccg agattttcgc
    16621 catgccagca ccagttcacg ggcgctatca ggtgtatatc aactactatg gtgggcgcag
    16681 cgaaacggaa ttgacgaccg cccaactgac gctgatcacc gatgaaggat cggtcaatga
    16741 gaaacaggaa acatttattg taccgatgcg taatgctggc gagctgacgc tggtgaaaag
    16801 ttttgactgg tgatccatcc cttcacacaa cctggctctc tcttttttca gataagactg
    16861 ctgggcgatc tgccgacgcc aggatataac cattaacaag cgtcggcaga ttggtcattt
    16921 cttatttttc gtactgagaa ctgtccatct actccggctt tcctggttaa ggcaatggtt
    16981 tctaagcgat acgcattatt gcaatggtga cagaacattg cggtaacacg cttttaccgc
    17041 taccttaacc acactccatc ggtcacctga ggcggagctt cgcccctttg aaataccttg
    17101 cttcttttcg tacaaccctg aaagcctcgc gctacatgtt cagagcattg gcgttagtgc
    17161 tctggctgtt gattgctttt tcatccgttt tttacatcgt taatgcgtta catcagcgag
    17221 aatcggaaat tcgtcaggaa tttaatctga gttccgatca ggctcagcgc tttattcaac
    17281 gcacctctga tgtgatgaaa gagctgaagt acatcgccga aaatcgctta tcggcagaaa
    17341 acggtgtgct ttccccgcgt ggacgagaaa cgcaggcgga tgtgcctgcg tttgaaccgc
    17401 tgtttgccga ctccgattgt tccgcaatga gtaacacctg gcgaggttct ctggagtcat
    17461 tggcgtggtt tatgcgctac tggcgcgata atttttctgc ggcttacgat ctaaaccggg
    17521 tatttttaat cggcagcgat aacctctgca tggccaattt cggtctgcgt gatatgccag
    17581 tggaacgcga taccgcgttg aaagctttgc atgaacgcat caataaatat cgaaatgcac
    17641 cacaagatga tagcggcagt aacctctact ggatcagcga aggtccgcgc cctggcgtcg
    17701 ggtattttta cgcgttgacg ccagtttatc tggcgaaccg gttgcaggcg cttttgggtg
    17761 tcgagcagac catccggatg gagaactttt tcttaccggg tacgttgccg atgggggtta
    17821 ccattcttga tgaaaatggt cataccctga tttcgcttac cggaccagaa agtaaaatta
    17881 agggcgatcc tcgctggatg caggaacgct cctggtttgg ctatacggaa gggttccggg
    17941 agctggtgct gaagaaaaat ctgccaccct catcgctaag catcgtgtat tcggtgccgg
    18001 ttgataaggt gctggaacgc attcgcatgt tgatccttaa cgcaattttg ctgaatgtgc
    18061 ttgccggagc tgcattgttt actctcgcgc ggatgtacga gcgacgtatt ttcattccgg
    18121 cggaaagcga cgccctgcga ctggaagaac atgagcagtt caatcgcaag attgtcgcct
    18181 ccgcgccagt gggtatctgt attttgcgta ccgctgatgg cgtcaatatt ttaagtaacg
    18241 aactggcgca tacctatctc aatatgctta cgcatgagga ccgccaacga ctgacgcaaa
    18301 ttatctgtgg gcagcaggtc aattttgttg atgtcctgac cagcaacaat accaatctgc
    18361 aaatcagctt cgtccattcg cgctatcgta atgaaaacgt ggccatttgt gtgctggtgg
    18421 atgtttcttc gcgcgtgaag atggaagagt cgttgcagga gatggcacaa gcagcggaac
    18481 aggcgagcca gtcaaaatcg atgttccttg ccaccgtcag tcatgagctg cgaacgccgc
    18541 tgtatggcat tatcggtaac ctggatctgt tgcaaaccaa agagttaccg aaaggcgtcg
    18601 atcggctggt gacggcaatg aacaactctt ccagcctgtt gttgaaaatt atcagcgata
    18661 ttctcgattt ctcgaagatt gaatcggaac agttgaagat cgaaccgcgt gagttttcac
    18721 cgcgtgaagt gatgaaccac atcaccgcca actatttacc gctggtggta cgcaagcagt
    18781 taggcttgta ctgctttatt gaaccggatg tgccagtggc cttaaatggc gacccgatgc
    18841 gtttacagca ggtcatctcc aacctgttga gtaacgccat aaaattcacc gataccggct
    18901 gtatagtttt gcatgtccgc gctgatggcg attatctctc tatccgtgtt cgcgataccg
    18961 gcgtggggat tccggcgaaa gaagtggtgc gcttgtttga tcccttcttc caggtcggaa
    19021 cgggcgtaca gcgaaacttc caggggaccg gtctgggtct ggcgatttgt gaaaaactga
    19081 tcagcatgat ggacggcgat atctcggtag attcagaacc gggaatgggc agccagttta
    19141 ccgtgcgtat tccgttgtac ggcgctcagt acccgcagaa aaaaggcgtg gaagggttga
    19201 gtggtaaacg ctgctggctg gcggtccgca atgcgtcgct ctgtcagttc ctggaaacca
    19261 gtttgcagcg cagcggcatc gtcgttacaa catacgaagg gcaggaaccg actcccgaag
    19321 atgtgttaat tactgacgag gtagtgagta aaaaatggca gggtagagcg gtagtgacct
    19381 tctgtcgtcg ccatattggt attccgctgg agaaagcgcc aggggagtgg gtacacagtg
    19441 tggctgcccc gcatgagcta ccggcattgt tggcgcgtat ttatttgatc gagatggaga
    19501 gcgacgatcc tgctaacgct ctgccgtcga cggacaaagc ggtcagcgat aatgacgata
    19561 tgatgattct ggtcgtggat gatcatccga ttaaccgacg tctgctggca gatcagttgg
    19621 gatcgttggg ctatcaatgt aaaaccgcga atgatggtgt cgatgcgctt aatgtactta
    19681 gcaagaatca tattgatatc gtgcttagcg acgtcaacat gccaaatatg gatggttacc
    19741 gcttgacgca acgcattcgt cagttgggac tgacgttgcc ggtaatcgga gtaactgcta
    19801 atgcgttggc tgaagagaag cagcggtgtc tggagtccgg tatggacagc tgcctgtcga
    19861 agccggtaac gctggatgtg ataaaacaga cgctgacggt atatgccgag agggtcagga
    19921 aatcgcggga atcgtaggac ggataaggtg tttatgccgc atctggcatt cagtgcaaat
    19981 gccagatgcg acgctgacgc gtcttatctg gcctacttta atgtaatctg ttgaaataat
    20041 gggaatcgta ggccggataa ggcgtttacg ccgcatccgg caatcggtgc aaatgccaga
    20101 tgcgacgctg acgcgtctta tctggcctac aggtgattag tctttatctg ccggacttaa
    20161 cgtcactgaa gagagataat tcagcagggc gatatcgttc tcgacaccca gcttcatcat
    20221 cgcagatttc ttctggctac tgatggtttt aatactgcgg ttcagttttt tagcgatctc
    20281 ggtcaccagg aagccttccg caaacaggcg cagaacttca ctctcttttg gcgagagacg
    20341 cttgtcaccg taaccaccag cactgatttt ttccaacagg cgagaaacgc tttccggggt
    20401 aaatttcttc cctttctgca gcgcggcgag agctttcggc agatcggtcg gtgcaccttg
    20461 tttcagcacg atcccttcga tatccagatc caataccgca ctaagaatcg ccgggttgtt
    20521 gttcatagtc agaacaatga tcgacaggct tgggaaatgg cgcttgatgt acttgattaa
    20581 ggtaatgcca tcgccgtact tatcgccagg catggagaga tcggtaatca acacatgcgc
    20641 atccagtttc ggcaggttgt tgatcagtgc tgtagagtct tcaaattcgc cgacaacatt
    20701 cacccactca atttgctcaa gtgatttgcg aataccgaac aagactatcg gatggtcatc
    20761 ggcaataatt acgttcatat tgttcatgta ataggctacc ttgctacagc aagctcttga
    20821 cataactgtc aatgtcgctg atgtattttt ctattcctgg aacatccttc tcacgaatca
    20881 gatgttccag cgtttcacat aactgcttgc cgggtaccag atttagcatg gcaaatacgc
    20941 ctttaagacg atgagccgtt tgggctaacg cagcaaagtc actggttgct gcttcagtat
    21001 acagcctctt aacatcatcc ggtactgtgt ctacaaagag cgcataatag ccgctggcat
    21061 ggagttgcgc attttcatct ccgcccagag gcgattctgt cacctcttcc tgcgccagtt
    21121 gcacttcaat taattgtaag accgcttcct gcatagcgtt gctcatattg aagttgacgc
    21181 acaattgacc aggcccaatt tcccgtacgc cagactcatc atcgcttaaa agcaagccag
    21241 aggcagtaag attagacgga ttatccgtta aaaagatatc ataatcttga ctaattaatc
    21301 tttcatcggg tgtgatacag gttgcacccc aattttctaa ctggcgagtg acaatattcc
    21361 gaatttctgc cgaagtaaca tccaccatta cgcagacatc atccagtaaa cgctcttctt
    21421 cctcttcaac ttccgggtca gcggcgagca ttttgatatg cacagagtag cgagtaccaa
    21481 gcccatcccg cgttttgatg tttaaatgac cgcccagttt acgcgccagt tgatcgctca
    21541 gccagaatgc cagcgggtcc gccttgccat agcgatcgtt ttgggtctgg ttgataaacg
    21601 ggaagtgcaa attatccatt tcatgaatac ttacgccttc tccggtgtcc agaatgcgga
    21661 atgtcaggcg gtcttcagag gactcatcct gatcaacctc aagggtgatt tttcccaatt
    21721 gcgttgaggt cacggcatat tgcatcagta gcagcaaaat acgtcgtaag gcatcgcgat
    21781 cgccgcggcg catatcgtgt gctttcagat gattgttaat cagcagttgc agacctttac
    21841 gcttgatggc aggcaacact gaaggcacaa cttcatcaat taaatcctgc acggagaaca
    21901 gcaccgtctc acttttccag ctatcatccg caagcatgtt cgctaactgt atttcatcaa
    21961 ccagccgcac cagcacatct gcctgattcg ccagttgttt gctttccggg gcgttgagtt
    22021 tagccgcgct ctccgccagg gactgtgcag gttctttcag cgcatcgcca atgtttttca
    22081 taaaggtcat ccggccctgc tggtttttct catacagacg ctgcgcctgc ttgagtttct
    22141 tgtttaccag cacttcgcga tcctgatcgc gaataatgaa aatttgtgtg cgcggcgcga
    22201 cctggctgcg gaacatgcgg atctcataca gctcgttatt gatcgtcgcc tgaataatcc
    22261 cctgatgctg ttccgccatg gtggtgatgt tttgcagatt caaatgcggc agcaaatgat
    22321 cggcaatttt gttacttatg acagtgcggt tcgattcctg atcgtgaacc agcaggccga
    22381 gcggcagcag tgagactatc tcttcattaa ttgcccgtaa aatgcgcaat tcgttattga
    22441 ccgccgtgct gggtagactt tctgtactgc ggctggagaa atggcggaat gtggtatagc
    22501 caaataacgc cagcgccagc aaaccgatgt tcagcagcag tggcagcaga atgttttgca
    22561 acgtatccag caataaggtg ccataaggaa cctgccagac caggcgcata tcggtagagt
    22621 tgagtgccga ggagatttca atcttcgtac tgttaaagtg gatactgacg ctatccgttc
    22681 cttctttctc attatcattg tctcccgttg ccgtcgtgtc tggctcaagg cggaaactgt
    22741 ccagcggcat acccggtggg atcaaatcat taatcggcag atcaaaagcc acgaccgttg
    22801 ccagatgtcc cggctggttg aacgtggtac gcaaggtaaa gtaatgaccg ttctgccagg
    22861 ccaggcggcg catgttagaa aaactttcgc gttcatcgag ggcgttggcc tgttgcaaca
    22921 tttctgcacg acgtgaatca acaatgtcac tgacggtcga ttctttaaat ccggaggtga
    22981 gatctttgag gggcagggtt gagatcagca ccagactgtt atcctgacca ttcaggtaat
    23041 acatcgacca cggtacattt tctgcgcccc acaatgtgtc cagataggtg gacatccgtt
    23101 gagtcatctc aagcgttgag ttgtcgtgag agccaaagat taacgcttcc gttttgcggc
    23161 gtggtttctc cagatagtag acatcctgtt tcaggcgcgt ctcttgtaaa ccttcgccgg
    23221 aggaggggga ggtcgtcgcg gcaatgttgt cgtagatctg ccaggtcacg taacgccagg
    23281 tatcgacgcg cttttggatt gcgtgggtaa tgtcgacaat ctggtaactt ttatctttca
    23341 gccatgcgtt aacggcgctt tgtaccatta cccccatcgt caccagtaac acaatgatca
    23401 acagtaaaaa gaagcgggta atgctccccg gtaggagtga aaagcgggtc gtggccgttg
    23461 tctctttctg acgcattcgt gtttatgacc tgttaaaact tcgcgaagtg atagggcagt
    23521 ataaagggta cagtgtgaaa ttccagactc ttacctgatt gatgattctc tattctcccg
    23581 tgatatttat catcctgtat gggggaaata gatgtacaag cgccattttg ctgtacaaat
    23641 aacctacaaa aagcccaacg aaattaattg caaataaacg aagattgctg gaaattatgc
    23701 tgatgttaat tatttgtgaa atagttaaca agcgttatag tttttctgtg gtagcacaga
    23761 ataatgaaaa gtgtgtaaag aagggtaaaa aaaaccgaat gcgaggcatc cggttgaaat
    23821 aggggtaaac agacattcag aaatgaatga cggtaataaa taaagttaat gatgatagcg
    23881 ggagttattc tagttg
//
LOCUS       DAPGWB010000067        23848 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.067, whole genome shotgun sequence.
ACCESSION   DAPGWB010000067 DAPGWB010000000
VERSION     DAPGWB010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 23848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23848
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.067"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            288..4748
                     /gene="gltB"
                     /locus_tag="RHX79_002498"
     CDS             288..4748
                     /gene="gltB"
                     /locus_tag="RHX79_002498"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDV2197653.1"
                     /translation="MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGA
                     ILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIV
                     EEELQRETLSIVGWRDVPTNEGVLGEIALSSLPHIEQIFVNAPAGWRPRDMERRLFIA
                     RRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRF
                     STNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNET
                     GSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWD
                     GPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVG
                     PGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELD
                     DDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQ
                     QFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLT
                     TMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLP
                     VPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETL
                     GRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDV
                     VGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPD
                     VVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFK
                     RFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGR
                     FGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHH
                     DIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGT
                     GASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAE
                     SFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARE
                     TRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTEN
                     NPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLA
                     ADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH
                     EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCIL
                     GKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLSVDDLAIHEEHLRGLITEHVQ
                     HTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ"
     gene            4761..6179
                     /gene="gltD"
                     /locus_tag="RHX79_002499"
     CDS             4761..6179
                     /gene="gltD"
                     /locus_tag="RHX79_002499"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit GltD"
                     /protein_id="HDV2197654.1"
                     /translation="MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQA
                     DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR
                     LCEGSCTLNDEFGAVTIGNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLA
                     CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTE
                     VGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGE
                     TRDEPFVSMEGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKN
                     AREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGETDAKGRRRAEIVAGSEHIVPA
                     DAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSD
                     LVVTAIAEGRKAADGIMNWLEV"
     gene            6363..7490
                     /locus_tag="RHX79_002500"
     CDS             6363..7490
                     /locus_tag="RHX79_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDV2197655.1"
                     /translation="MESLSERTSTGYQQIHDGIIHLVDSARTETVRSVNALMTATYWE
                     IGRRIVEFEQGGEARAAYGAQLIKRLSKDLSLRYKRGFSAKNLRQMRLFYLFFQHVEI
                     RQTVSGELTPLGIPQTPSAEFPSAKIWQTLSAKSFPLPWSTYVRLLSVKNADARSFYE
                     KETLRCGWSVRQLERQIATQFYERTLLSHDKSAMLQQHAPTETHILPQQAIRDPFVLE
                     FLELKDEYSESDFEEVLINHLMDFMLELGDDFAFVGRQRRLRIDDNWFRVDLLFFHRR
                     LRCLLIVDLKVGKFSYSDAGQMNMYLNYAKEHWTLPDENPPIGLVLCAEKGAGEAHYA
                     LAGLPNTVLASEYKMQLPDEKRLADELVRTQAVLEEGYRRR"
     gene            complement(7550..8014)
                     /locus_tag="RHX79_002501"
     CDS             complement(7550..8014)
                     /locus_tag="RHX79_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDV2197656.1"
                     /translation="MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDN
                     IFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQ
                     LCSTIDNEQAIILKPGMFAVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA"
     gene            complement(8011..8886)
                     /gene="nanK"
                     /locus_tag="RHX79_002502"
     CDS             complement(8011..8886)
                     /gene="nanK"
                     /locus_tag="RHX79_002502"
                     /EC_number="2.7.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312122.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HDV2197657.1"
                     /translation="MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDA
                     LSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTDLPTIA
                     INDAQAAAWAEYQALEGDVTEMVFITVSTGVGGGVVSGGKLLTGPGGLAGHIGHTLAD
                     PHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADARTIFTRAGQGDEQAQQLIHRSA
                     RTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHD
                     AGLLGAALLAQGEKL"
     gene            complement(8883..9572)
                     /locus_tag="RHX79_002503"
     CDS             complement(8883..9572)
                     /locus_tag="RHX79_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HDV2197658.1"
                     /translation="MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQ
                     AGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADII
                     AIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTP
                     ETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQ
                     WYNTAMKKAVL"
     gene            complement(9620..11110)
                     /gene="nanT"
                     /locus_tag="RHX79_002504"
     CDS             complement(9620..11110)
                     /gene="nanT"
                     /locus_tag="RHX79_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312124.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid transporter NanT"
                     /protein_id="HDV2197659.1"
                     /translation="MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLT
                     EVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLAC
                     GFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVA
                     AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILY
                     RGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSTGKRWPT
                     GVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVGGFL
                     GDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIG
                     GYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSFSLTFVVILLI
                     GLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGSAKNDLVKTKS"
     gene            complement(11219..12112)
                     /gene="nanA"
                     /locus_tag="RHX79_002505"
     CDS             complement(11219..12112)
                     /gene="nanA"
                     /locus_tag="RHX79_002505"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HDV2197660.1"
                     /translation="MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYV
                     GGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDA
                     VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
                     VGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ
                     GIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGP
                     VDEKYLPELKALAQQLMQERG"
     gene            complement(12234..13025)
                     /gene="nanR"
                     /locus_tag="RHX79_002506"
     CDS             complement(12234..13025)
                     /gene="nanR"
                     /locus_tag="RHX79_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417693.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NanR"
                     /protein_id="HDV2197661.1"
                     /translation="MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMI
                     RRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADT
                     IIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQ
                     SLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVS
                     YQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK"
     gene            13405..14772
                     /gene="dcuC"
                     /locus_tag="RHX79_002507"
     CDS             13405..14772
                     /gene="dcuC"
                     /locus_tag="RHX79_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
                     /protein_id="HDV2197662.1"
                     /translation="MFGIIISVIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVWLGF
                     GGVLDPAKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERTGASRAMVSL
                     LSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAV
                     AVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRA
                     FDKKDKNINHEQAELKALDNVPPLYYAILPVMPLILMLGSLFLAHIGLMQSELHLVVV
                     MLLSLTVTMFVEFFRKHNLRETMDDVQAFFDGMGTQFANVVTLVVAGEIFAKGLTTIG
                     TVDAVIRGAEHSGLGGIGVMIIMALVIAICAIVMGSGNAPFMSFASLIPNIAAGLHVP
                     AVVMIMPMHFATTLARAVSPITAVVVVTSGIAGVSPFAVVKRTAIPMAVGFVVNMIAT
                     ITLFY"
     gene            complement(14815..15312)
                     /gene="sspB"
                     /locus_tag="RHX79_002508"
     CDS             complement(14815..15312)
                     /gene="sspB"
                     /locus_tag="RHX79_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HDV2197663.1"
                     /translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPME
                     YARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGT
                     MFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPA
                     LRVVK"
     gene            complement(15318..15956)
                     /gene="sspA"
                     /locus_tag="RHX79_002509"
     CDS             complement(15318..15956)
                     /gene="sspA"
                     /locus_tag="RHX79_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HDV2197664.1"
                     /translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD
                     NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY
                     MHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
                     LAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAEREMRLGRS"
     gene            complement(16351..16743)
                     /gene="rpsI"
                     /locus_tag="RHX79_002510"
     CDS             complement(16351..16743)
                     /gene="rpsI"
                     /locus_tag="RHX79_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDV2197665.1"
                     /translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA
                     RMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAG
                     FVTRDARQVERKKVGLRKARRRPQFSKR"
     gene            complement(16759..17187)
                     /gene="rplM"
                     /locus_tag="RHX79_002511"
     CDS             complement(16759..17187)
                     /gene="rplM"
                     /locus_tag="RHX79_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDV2197666.1"
                     /translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY
                     TPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE
                     IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI"
     gene            complement(17406..18533)
                     /gene="zapE"
                     /locus_tag="RHX79_002512"
     CDS             complement(17406..18533)
                     /gene="zapE"
                     /locus_tag="RHX79_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HDV2197667.1"
                     /translation="MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSRP
                     PAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQR
                     LHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLM
                     KALFTRGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTL
                     TQAHLWLSPLNDETRAQMDKLWLALAGAKRENSPTLEINHRPLATMGVENQTLAVSFT
                     TLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVS
                     AEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG"
     gene            18727..19125
                     /locus_tag="RHX79_002513"
     CDS             18727..19125
                     /locus_tag="RHX79_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1043 family protein"
                     /protein_id="HDV2197668.1"
                     /translation="MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAE
                     LDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAES
                     EASNDQAPVQMPRDYSEGASGLLRTGAKRD"
     gene            19279..20646
                     /gene="degQ"
                     /locus_tag="RHX79_002514"
     CDS             19279..20646
                     /gene="degQ"
                     /locus_tag="RHX79_002514"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegQ"
                     /protein_id="HDV2197669.1"
                     /translation="MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAP
                     MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKG
                     YVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSD
                     KLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGAL
                     LNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM
                     SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIAT
                     TEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGI
                     KIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRGNESI
                     YLLMR"
     gene            20736..21803
                     /gene="degS"
                     /locus_tag="RHX79_002515"
     CDS             20736..21803
                     /gene="degS"
                     /locus_tag="RHX79_002515"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HDV2197670.1"
                     /translation="MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETP
                     ASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
                     QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN
                     PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL
                     SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGI
                     DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV
                     VMRDDKQLTLQVTIQEYPATN"
     gene            complement(21866..22804)
                     /gene="mdh"
                     /locus_tag="RHX79_002516"
     CDS             complement(21866..22804)
                     /gene="mdh"
                     /locus_tag="RHX79_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000861594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDV2197671.1"
                     /translation="MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV
                     DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV
                     QQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE
                     LKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKA
                     GGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE
                     ERKSIGTLSAFEQSALEGMLDTLKKDIALGEEFVNK"
     gene            23239..23709
                     /gene="argR"
                     /locus_tag="RHX79_002517"
     CDS             23239..23709
                     /gene="argR"
                     /locus_tag="RHX79_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001257852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HDV2197672.1"
                     /translation="MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQS
                     KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP
                     GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL"
BASE COUNT         5778 a         6334 c         6186 g         5550 t
ORIGIN      
        1 tgcgctaaag cacatttctg taccaataag cttgccattt gacctgtatc agctttcccg
       61 ataagttgga aatccgctgg aagctttctg gatgagcagc ctgctcatca tatttatgca
      121 gtaattgaga tcccctcttc accgtattaa ccgatgcgaa aaggacaaca agggggcgaa
      181 tgcgaggcgc gcgtatgaca cgcaaacccc gtcgccacgc tctttctgtg cccgtgcgca
      241 gcggttcgga agtggggttc ccgcagagcc tgggggaggt tcacgatatg ttgtacgata
      301 aatcccttga gagggataac tgtggtttcg gcctgatcgc ccacatagaa ggcgaaccta
      361 gccacaaggt agtgcgtact gcaatacacg cactggcccg catgcagcac cgtggcgcga
      421 ttctcgccga tggtaaaacc ggcgacggtt gcggcttgct gttacaaaaa ccggatcgct
      481 tttttcgcat cgttgcgcag gagcgcggct ggcgtttagc aaaaaactac gctgtcggga
      541 tgctcttcct gaataaagat cctgaactcg ccgctgccgc acgccgcatc gttgaagaag
      601 agctgcaacg cgaaaccttg tcgattgtgg gctggcgtga tgtccccact aacgaaggcg
      661 tgctgggtga aatcgccctc tcctctctgc cccacattga gcaaattttc gttaacgctc
      721 cggcaggctg gcgtccgcgc gatatggagc gccgtctgtt tatcgcccgc cgccgcattg
      781 aaaagcgtct cgaagccgac aaagacttct acgtctgtag cctgtcgaat ctggtgaaca
      841 tctataaagg tctgtgtatg ccggcggatc tgccgcgctt ttatctggat cttgcggacc
      901 tgcgtctgga atcggccatc tgcctgttcc accagcgctt ctccactaac accgtaccgc
      961 gctggccgct ggcgcagccg ttccgctacc tggcgcataa cggtgaaatc aacaccatca
     1021 ccggtaaccg ccaatgggcg cgtgcgcgta cctataaatt ccagacgccg ctgatccctg
     1081 atctgcacga cgccgcaccg ttcgtcaacg aaaccggttc tgactccagt tcgatggata
     1141 acatgctgga actgctgctg gcaggcggga tggatatcat ccgcgccatg cgtctattag
     1201 taccacccgc ctggcagaac aacccggata tggacccgga actgcgtgcc ttctttgact
     1261 ttaactccat gcatatggag ccgtgggatg gcccggcggg catcgtgatg tccgatggtc
     1321 gcttcgctgc ctgtaacctc gaccgtaacg gtctgcgtcc ggcacgctac gtcattacca
     1381 aagacaagct catcacctgc gcctctgaag tcggtatctg ggattatcag cctgacgaag
     1441 tggtcgaaaa aggccgcgtc gggccaggcg aactgatggt gatcgacacc cgcagtgggc
     1501 gtattctgca ctcggcagaa accgatgacg atctgaaaag ccgccatcca tataaagagt
     1561 ggatggagaa aaacgtccgc cgactggtac cgtttgaaga tctgcccgat gaagaagtgg
     1621 gtagccgcga actggacgac gacacgcttg ccagctacca gaaacagttt aactacagcg
     1681 cggaagagct ggactccgta attcgcgtac tgggcgaaaa cggtcaggaa gcggtcggtt
     1741 cgatgggcga tgatacccca ttcgccgtgc tctccagtca gccgcgcatt atttacgact
     1801 acttccgcca gcagtttgcc caggtgacta acccgccaat cgacccgctg cgtgaagcgc
     1861 atgttatgtc gctcgccacc agtatcggtc gtgaaatgaa cgtcttttgc gaagcagagg
     1921 gccaggcgca ccgtttaagc tttaaatcgc cgattctgct ctactccgat ttcaaacagc
     1981 tcacgacgat gaaagaggag cactaccgcg cagatacgct ggatatcacc tttgacgtca
     2041 ctaaaaccac gctcgaagcg acagtcaaag agctgtgcga caaagccgaa aaaatggtac
     2101 gtagcggcac cgtgctgctg gtgctctccg accggaatat cgctaaagat cgcctgccgg
     2161 ttccagcccc gatggcggtt ggcgcgatcc agacccgtct ggtcgatcaa agcctgcgtt
     2221 gcgatgccaa catcatcgtc gaaaccgcca gcgcccgcga tccgcaccac ttcgccgtgt
     2281 tgctgggctt cggcgcgacg gctatttatc cataccttgc ctatgaaacg ctgggccgcc
     2341 tggtagacac ccatgcgatt gccaaagatt atcgtaccgt gatgctcaac taccgtaacg
     2401 gcatcaacaa aggcttgtac aaaatcatgt ccaaaatggg catctccacc atcgcctctt
     2461 accgctgctc gaaactgttt gaagcggtcg gtctgcacga tgatgtagtg ggcctgtgct
     2521 tccagggggc ggtcagccgc attggtgggg cgagctttga agacttccag caggatctgc
     2581 tgaacctgtc gaaacgtgcc tggctggcgc gtaagcccat cagccagggc ggcctgctga
     2641 aatacgtcca cggcggcgaa taccacgctt acaacccgga cgtggtgcgc acgctgcaac
     2701 aggcggtaca aagcggcgag tacagcgact atcaggaata cgcgaagctg gttaatgagc
     2761 gtccggcaac cacgctgcgc gatctgctgg caattacgcc gggtgaaaac gcggtcaaca
     2821 ttgctgatgt tgaaccggca agcgaactgt ttaaacgctt tgataccgcc gcgatgtcta
     2881 tcggcgcgtt aagcccggaa gcccacgagg cgctggcgga agcgatgaat agcatcggcg
     2941 gtaactcgaa ctccggtgaa ggcggcgaag acccggcgcg ctatggcact aacaaagtgt
     3001 cgcgcatcaa gcaggtggct tctggtcgct tcggcgttac tccggcgtat ctggtcaatg
     3061 ccgacgtcat tcagattaaa gtcgcccagg gcgcgaagcc gggcgaaggc ggtcagttgc
     3121 cgggcgacaa agtcactcct tacatcgcca aactgcgcta ttcggtgccc ggagtgacgc
     3181 tgatctcccc gccgccgcac cacgatatct actctatcga ggacttagcg cagctcattt
     3241 tcgacctcaa gcaggttaac ccgaaagcga tgatctccgt gaagctggtt tccgaaccgg
     3301 gcgtaggcac catcgcgact ggcgtggcaa aagcttatgc cgatttaatc accatcgcag
     3361 gctatgacgg tggcaccggc gcaagcccgc tgtcgtcagt gaaatacgca ggttgcccgt
     3421 gggagctggg gcttgttgaa acccagcagg cgctggttgc caatggtctg cgtcataaga
     3481 tccgtttgca ggtcgatggc ggcctgaaaa ccggtgttga tatcatcaaa gcggcgattc
     3541 tcggcgcaga aagcttcggc ttcggcactg gcccgatggt ggcgctcggc tgtaaatatc
     3601 tacgtatttg ccatctgaac aactgcgcaa cgggtgtagc aactcaggat gacaaactgc
     3661 gtaagaacca ctatcacggc ctgccgttca aggttaccaa ttactttgaa tttattgccc
     3721 gtgaaacccg cgagctgatg gcacagctgg gcgtaacgcg tctggtggat ctgattggtc
     3781 gcaccgacct gctgaaagaa ctggacggtt tcaccgccaa acagcaaaaa ctggcgctgt
     3841 cgaagctgct ggagaccgcc gaaccgcatc caggtaaggc actctactgc accgaaaaca
     3901 acccaccgtt tgataacggc ctgctgaacg cgcagttgct gcaacaggcg aaaccgtttg
     3961 tcgatgaacg ccagagcaaa accttctggt tcgatattcg caacaccgac cgttctgtcg
     4021 gcgcgtcgct ttcaggctat atcgcccaga cgcacggcga tcaggggctg gcagccgatc
     4081 ctatcaaagc gtacttcaac ggcaccgcag gccagagttt cggtgtgtgg aacgcgggcg
     4141 gcgtggaact gtacctgacc ggggatgcca acgactatgt cggtaaaggc atggcgggcg
     4201 gcttaatcgc cattcgtcct ccggttggtt ccgccttccg cagccatgaa gcaagtatta
     4261 tcggcaacac ctgcctgtat ggcgcgaccg gtggtcgtct gtatgccgca ggccgcgcgg
     4321 gtgaacgttt cggcgtgcgg aactccggtg ctatcaccgt ggtagaaggc attggcgaca
     4381 acggctgtga atatatgacg ggcggtattg tctgtattct gggtaaaacc ggcgttaact
     4441 tcggtgcggg catgaccggc ggcttcgctt acgttctcga tgaaagcggt gatttccgca
     4501 aacgcgttaa cccggaactg gtcgaggtct taagcgttga cgatctggcg atccatgaag
     4561 agcatctgcg cggtcttatc accgagcatg ttcagcatac tggctctcag cgcggtgaag
     4621 agattctggc gaactggtca accttcgcca ctaaatttgc gctggttaaa ccgaagtcca
     4681 gtgatgtaaa agcactgctg ggtcatcgta gtcgtagcgc agcagagttg cgcgtgcagg
     4741 cgcagtaagg ggtagcaaca atgagtcaga atgtttatca atttatcgac ctgcagcgcg
     4801 ttgatccgcc aaagaaaccg ctgaagatcc gcaaaattga gtttgttgaa atttacgagc
     4861 cgttttccga aggccaggcc aaagcgcagg ctgaccgctg cctgtcgtgc ggcaacccat
     4921 actgcgagtg gaaatgtccg gtacacaact acatcccgaa ctggctgaag ctcgccaacg
     4981 aggggcgtat ttttgaagcg gcggaactgt cgcaccagac caacaccctg ccggaagttt
     5041 gcggacgagt ctgcccgcaa gaccgtctgt gcgaaggttc ctgcactctg aacgatgagt
     5101 ttggcgcggt gaccatcggc aacattgagc gttatatcaa tgataaagcg ttcgaaatgg
     5161 gctggcgtcc ggatatgtcc ggcgtgaagc aaaccggtaa aaaagtggcg attatcggcg
     5221 caggcccggc aggtctggcg tgtgcggatg tcctgacgcg taacggcgta aaagccgttg
     5281 tcttcgaccg tcatccagaa attggcgggc tgctgacctt cggtattccg gccttcaagc
     5341 tggaaaaaga ggtaatgacg cgtcgccgtg aaatcttcac cggcatgggt attgaattca
     5401 aactcaatac cgaagtgggc cgcgacgtgc agctggacga tctgctgagt gattacgatg
     5461 ccgtcttcct tggcgtcggg acttatcagt caatgcgcgg cgggctggaa aacgaagacg
     5521 ccgatggcgt gtacgcagcg ctgccgttcc ttatcgccaa caccaaacag ttaatgggct
     5581 ttggtgaaac ccgcgacgaa ccgttcgtca gcatggaagg caaacgcgtg gtggtccttg
     5641 gcggtggcga cactgcgatg gactgcgtgc gtacgtccgt gcgccaggga gcgaagcacg
     5701 ttacctgtgc ctatcgtcgt gatgaagaga acatgccggg ttcccgccgc gaagtgaaaa
     5761 acgcgcggga agaaggcgta gagttcaaat tcaacgtcca gccactgggg attgaagtga
     5821 acggtaacgg taaagtcagc ggcgtaaaaa tggtacgtac cgaaatgggc gaaacggatg
     5881 ccaaaggccg tcgccgcgcg gagatcgttg caggttccga acatatcgtt ccggcagatg
     5941 cagtgatcat ggcgtttggt ttccgtccac acaacatgga atggctggca aaacacagcg
     6001 tcgagctgga ttcacaaggc cgcatcatcg ccccggaagg cagcgacaac gccttccaga
     6061 ccagcaaccc gaaaatcttt gctggcggcg atatcgtccg tggttccgat ctggtggtaa
     6121 ccgctattgc cgaaggtcgt aaggcggcag acggtattat gaactggctg gaagtttaag
     6181 ctctgtccca gcgccgcctc ctcagaaaag agtcggcgct caaattctcc tttctttctg
     6241 gaaagcgcct cgcataatct gaagaaaacc aatgtaatac gctcatctgg attgttaccg
     6301 gtagatgccc ggcgtatagc tgattccatt attcaacgca gcgccatata aagggacaga
     6361 taatggaatc gctctcagag agaacctcaa caggctacca gcaaatccat gacggtatta
     6421 ttcacctggt cgatagcgcc cggacggaaa cggtacgtag cgttaacgcg ctgatgaccg
     6481 cgacatactg ggaaattggc cgacgaattg tcgaatttga acaaggtggc gaggccaggg
     6541 ctgcgtatgg tgcgcagcta atcaagcgac tatcaaagga tttaagtcta aggtataagc
     6601 gtggtttctc tgcaaaaaac ttacgccaaa tgaggctttt ttacctcttt tttcaacatg
     6661 ttgaaattcg ccagacagtg tctggcgaat taacaccatt gggaattccg cagacaccat
     6721 ctgcagaatt cccatcggca aagatttggc agacgctgtc tgccaaatct ttccccctgc
     6781 cctggtccac ctacgtccgt ttactttccg ttaaaaacgc tgacgcccgc agcttttatg
     6841 aaaaagagac gctccgctgt ggctggtctg ttcgccagct agaacggcaa attgcgaccc
     6901 aattttatga gcgaacacta ctgtcacatg acaaatcagc catgctgcaa caacacgctc
     6961 ctaccgagac gcatattctt ccgcaacagg cgatacgcga tccctttgtg ctcgaatttc
     7021 tggaattgaa agatgaatat tcagaatctg atttcgagga ggtgctgatc aaccacctga
     7081 tggatttcat gctggaactt ggggatgatt ttgcctttgt tggtcggcag cgaaggttac
     7141 gcattgatga caactggttt cgtgtcgatc tgctgttttt ccaccgccgt ttacgctgcc
     7201 tactaatcgt cgatctaaaa gtgggcaaat tcagctatag cgatgccgga cagatgaata
     7261 tgtatctcaa ctacgccaaa gagcactgga cgctaccgga tgaaaatccg cccatcggtc
     7321 tggttctctg tgcagagaaa ggagccggag aagcacatta tgctctggca ggtttgccta
     7381 acaccgttct ggcaagcgaa tataagatgc aactacctga tgagaaacga ctcgcagatg
     7441 aactcgttcg aacacaggcg gtgctagagg aaggctatag acgccgttaa tttcagcggt
     7501 ttcgaattct gcagacagtg tctgcagaat ctttaaaacg aactaagttt taagccatta
     7561 aatcagcctt aaccttcacc acaacctttt taatctctcc aggctcgccg acaacgcatc
     7621 ctggtttatg cggttcacct ggcataaaca cggcgaacat tcccggtttt aagatgatgg
     7681 cttgctcgtt atcaatggtg ctgcaaagct gataatcatc ctcatggtgg aactcttcac
     7741 actggcgcgc agtgcctgcc atgccaaaca gaatccgttc ctcaccgttt aataacagtt
     7801 ggatatcaat gtattgctcg tgcaattccg cttttttctc gacgggcgat tgagtgttaa
     7861 acgtcatgac attcataaag atattgtcgc cctgtaattc gtaacgaccc ggcgcttttt
     7921 cttgcggtct ggcagctaat gccagcgtta acgcgtcctg taacgcagga tgtaacccag
     7981 cagacggtaa tgactgtact tcacccatca tcataatttt tctccctggg ccaacagcgc
     8041 agccccaagt aaacctgcat cgtggcggta gtgcgccgcc agtaaatcaa catgaaatgc
     8101 cgctggctcc tgcgccagat acgtttccac cagcgccaga tacccttctg ccagcccaac
     8161 gctgccaccg accaccacgc actggcaatc agttgtggct ttaatatcag cgatcagcct
     8221 tgcaagcgta cgtgcggagc ggtgaatcag ctgctgcgcc tgctcgtcgc cctgcccggc
     8281 gcgtgtgaaa atagttctcg catccgcgcc cgccagttca ccctgcgctg ccgccgcaat
     8341 gccgcgacca gaagcaatcg cctccacgca acctgtgcgt ccacagccac agaccgggcc
     8401 gtgtggatcg gcaagcgtat gcccgatatg ccccgccaga ccgccagggc cggtaagcag
     8461 tttgccgccg ctcactacac cgccgccgac gccagtggaa acggtgataa acaccatctc
     8521 ggttacatcg ccttccagcg cctgatactc cgcccatgct gcagcctgcg cgtcgttaat
     8581 ggcaatggtc ggcaaatcgg taagttgttc cagcgttttg actaacggaa agtgtagcaa
     8641 tccaccaaga ttatgcggat tcagcgccag caagctgccg tcgcgaataa tcccggttga
     8701 agcgatggca acccgctgcg catgagcttg caacggagag actaatgcgg ataaggcatc
     8761 acgcaaggct tctggtgtct ggctggctgg cgtaggaagt tcacgacgat cgcggatctg
     8821 cccgtcagcg ccaatcagcg cggcggcaag tttagtaccg ccgatatcaa tcgccagcgt
     8881 ggtcatagca ccgccttttt catcgctgtg ttgtaccact gacaaatgtg ttcaagacgc
     8941 gtaatggcag aaccgaccgt caccgcccac gcgccgtggc gcatcgcatc tgccgcctga
     9001 gcaggcgtgt tgtaacgccc ttcggcaatc accctacatc cggcgtcgct caacgttttc
     9061 accagcgcca gatccggctc ttctggcgtt tcaggcgtgg tatagccaga aagcgtagtg
     9121 ccaataattt cggctcccag cttttggcat gccaggccgt cttccggcgt tgagcagtcg
     9181 gtcatcgcca gtaaaccgtg atggtgaata cgtgccagca gcgtttcaac aggcaccgga
     9241 cgcgggcggt cggtgccgtc aatggcgata atgtccgcgc ccgcctgcgc cagcgcatca
     9301 acatcttcaa tataggccgt gatgcgtacc ggagaatcct ccagatcgcg tttcacaatt
     9361 ccaataatcg gcacgctcac caccgcacgc gtggcttgca gatttgccac accttcaatg
     9421 cgaatggcaa ccgcgcccgc ctgttctgcc gctaatgcca tggcggcgac gatttcgggt
     9481 ttatcgagcg ggctgtccgg aaccggctgg caggagacaa tcaggccacc gttagcagcg
     9541 attttttgat ccagttgtgc aagtaacgac atacatcttc ccttagcgaa aggcccggta
     9601 catagaccgg gcaacaggat taacttttgg ttttgactaa atcgtttttg gcgctgccaa
     9661 atggcacggc accgctaaat ggtttgccgt cgatagcgtc atgagtacgc aatgcttccg
     9721 ggcgcagcca acgctgaacg cgggaaggca tatccagacc aatcagcagg atcaccacaa
     9781 atgtcagact gaacgatagc gatgccagcg cagtacccag atccagacgt tgagcgatca
     9841 acgcgccgat gattggggcc agtgcgccgc ccaatgcgcc aacgttgtag gtaaagccca
     9901 ggcccgctgc acgctggtcg gtatcgaaat aaccgccaat cagtttcggt aagatcccgg
     9961 cgatcccttg tccaagcatt tgctggaaga acagtaacag accgagcacc cagacgtttg
    10021 cgccgccaat cgcaaatacc ggaataatca gcagctgcga ggccagcagg ctacaaacgt
    10081 acgctttgcg ggttcccagc cagtcaccga ggaagccgcc gacacagcac cccaccgcag
    10141 ccccaaagcc gctaaagaac agcacattgg cgacagtatg cgggttataa gccagatcgg
    10201 ttttcagata cgttggcagc agcgcctgaa tcggccatga gtagaggaaa gcaaacaaca
    10261 cgaccaccat cagcattacg cccgttggcc agcgtttacc cgtactttgc accataaagc
    10321 tgataaagat tgcggcgcat aacagcccaa gaacagcgac gatcgcggca ttttgcaggt
    10381 taccggcgaa gcaaaaccac agcgcagtag ccgccgccag tgtcattacg atattggcaa
    10441 tgcgatgttc accacggtag agaatatcta ccatcgtgcg tactggtgct ttacctgcat
    10501 gtttctcttt ccagtcttcc gcttccggga tgtttttacg cagccagaga gcaaagatga
    10561 taggcaaaat gccgataaag aacagcgcac gccagcccca gaccggaacc accaggctat
    10621 agacctgagc ggcaacgacg gcccccacag agaagcctga aatcagaaaa ccactggctt
    10681 tgttacgcag atgttttggc cagctttcaa tgacataggt ggcgctggaa ccgtattcac
    10741 ccgccatccc catgccgatg accagacgcg cgataaacat ggtgatgtag cctggcgcaa
    10801 agccgcaggc cagcgtcccg gccgagaaga gaacgatgct ggtgaccatt gccagacgac
    10861 gcccgtagcg gtcacccata gcgccgagca tcaggccgcc gaaccagcga gagataaagg
    10921 ctgcggagat cagacttgcc gcctgcaccg tcgtcagccc gaattcacct tgtacttcgg
    10981 tgagtaccag ggcgattaaa acgaaatcaa aaccgtcaag cagatatccc aaccaggcag
    11041 cggaaaatgc ccgccattgt gcacgattga gatggcgata ccacgggata ttctgggttg
    11101 tagtactcat tgtgagtctc ccgcggtggg cgatgcccac acgctttggt ataaaaattg
    11161 tagggtacag atgcgtttat ttcccctcac ccggtagggg cgagcgaggg gaaacaactc
    11221 acccgcgctc ttgcatcaac tgctgggcca gcgccttcag ttctggcaga tatttttcat
    11281 ctaccggtcc aaacggtttg cggcacagcg gcacagaaac gacatccata taatggagga
    11341 cagttttcag gccgcggaat acgcccgttt tgatcagtaa atcaatgact ttattgcatt
    11401 cagtttgcag tttctgcgcg gtctggatat cgccttcttt cagcgcctta acgatcccct
    11461 gatagcgcca gcccatgatg ttgtaggtac taccgatacc accatcagcg cccgccagca
    11521 gaccagaggc gaagatttcg tcgtaaccgt tatagagcac aagatcagga tgttcacgac
    11581 ggatctgctc catctgatag agatcgccag aggtctgttt cagcgcacct acgccaggca
    11641 atgtaacaag tgtgttgatc tgatccaggg tcagttttac cccactcagg gctggaatgt
    11701 tgtacaccac catcggcaaa ccatccgccg aatcaataat tgcccgatag tgatcgcagt
    11761 gttcttcaaa gctgaaagga tagtagaacg gcgtgacggc ggagacggca tcgaagccat
    11821 aacgtttagc cgatgccgca agttgttggc tttcggcggt gctgacgcaa ccgacgtggg
    11881 cgatgagttt aatcttacct ttcgcctctt cggcgacgat ttccagtacc tgttcacgct
    11941 cggaaaggct ttgtacaaag gcctcgccgg tcgaaccacc cacgtataaa ccgtcgatgc
    12001 cctgctgaat attgaactga accaggcgac gcagactcgc tttatccagt gcttgttgtt
    12061 ggtcaaaagg agtcaggagt gcagccatta cgccacgtaa attcgttgcc ataaatacct
    12121 ctgaagtgat gcttgtctga taaacgatat acctttatac ctgttatacc agatcaatta
    12181 agcaacaccc catacagaaa gcttataatg cgatctgctt cactaaagtg gcattatttc
    12241 tttttgttgg tggtctgacc gaaagcgtgc caggtagcag agacgctgtt gagatgcgat
    12301 tgcaacgcac gatcggcttc gtcaggatca tgacggcgga tcgcatcaac gatcgcaata
    12361 tgctgttgat aactaacgtt gttatgttcg tgcagtgcct gatcggtaac cgttgggcgt
    12421 gcggcaataa gccagtcgag cagggcaacg tggatcgcca tgaagattgg gttaccgggg
    12481 atctccgcca gcacgcggtg gaaatcaacg tctgaacgaa tgaatgccgc gttgttatcc
    12541 agcgactgac tgttgatttc cagtgctttt gccagcaaat cgatttgctc atcggtggca
    12601 tgttcagccg catagcgcac caggctggat tcaaagaaca gacgtaattg ttcgaaatgg
    12661 gcaatcccac caggatgaga aaggaaatct ttcgccatgc cggaaagctc gccgatgatg
    12721 gtgtccgcag aaggacgtga gacgcgggca cgttcgccgt tgttgatttg caccagacct
    12781 ttgcgtttta acgctgccag cgcttcgcgc acagaaggac gcccgacgtt aaagaacgcc
    12841 atcagttcgc gttcagacgg taattgttca ccttcgccaa attcacgacg gcggatcatc
    12901 tgttccagct cttcttccac catttcggag agttttttac gcgccagcgg gcggctacgc
    12961 aagttgcgac caattgcagg tgaagaatct tcggtttgcg aatcaaatgc gttcataagg
    13021 cccattctgt aaggtcagtg tgattaacat catcagtgac atcctatcac aggattgaaa
    13081 gtaggggaaa atggcaggtt tttctctttg tgcctcatca ttaccataat taacggaata
    13141 attaactatt gcgaaaaatt aatgtaacgc agataaaaac atcccgtttg aattatttat
    13201 aagactattc acgagcatta tgaatattat gaatgtgttc ttacaaaata atcataagtg
    13261 catatttttt aatgaaaaat cacctcacct acaattaaaa acacgacatc cgcaccataa
    13321 atagacttgc aaaaaatata acatcattgt tttcaatctg ccgtttatgg gattgaccgt
    13381 tttcttttga cacggagttc aacaatgttc ggcataatta tatctgtcat cgtattaatt
    13441 acgatgggct atttgatcct gaaaaactac aaacctcagg tggtgctggc tgccgcaggt
    13501 atcttcctga tgatgtgcgg tgtctggtta gggttcggtg gtgtactcga tcccgccaaa
    13561 agcagcggct acttgatcgt cgatatttat aatgaaatcc tgcgcatgct gtccaaccgc
    13621 attgccggat tggggctgtc gattatggcg gtgggcggtt atgcccgcta catggagcgc
    13681 acaggagcca gtcgcgcgat ggtgagcttg ctaagccgcc cgttaaaact cattcgctcg
    13741 ccgtatatta ttctgtcggc aacttacgtc atcggccaaa tcatggcgca gtttattacc
    13801 agcgcctccg gcctgggtat gttgctgatg gtcaccttat ttccgacgct ggtgagtctg
    13861 ggagtaagtc gcctctctgc ggtggcggtt atcgcaacca cgatgtccat tgagtggggg
    13921 attctggaaa cgaactccat ttttgcagcc caggtcgcgg gaatgaaaat tgccacttac
    13981 ttcttccact accagcttcc ggtcgcctct tgcgtcatta tctcggtggc gatctcccac
    14041 tttttcgtgc aacgcgcttt tgacaaaaaa gataaaaata tcaatcacga acaggcagag
    14101 ctaaaagctc tcgataatgt cccgccgctc tattacgcca ttttacctgt gatgccgtta
    14161 atcttgatgc tcggctcgct gttcctcgcc cacatcgggc tgatgcagtc agaactgcat
    14221 ctggtggtgg tgatgttact gagtttgacg gtgacgatgt ttgttgagtt cttccgcaag
    14281 cataacttgc gcgaaacaat ggacgatgtg caggcgtttt ttgacggcat gggtacgcag
    14341 tttgccaacg tggtaacgct ggtggtcgcg ggtgaaatat ttgcgaaagg cttaacgacg
    14401 attggcactg ttgatgcggt tatcaggggt gctgagcatt ctggtctggg cggtattggc
    14461 gtgatgatta ttatggcgct agtcattgcc atttgtgcca ttgtgatggg ctctggcaat
    14521 gcgccgttta tgtcatttgc cagtcttatt ccgaatatcg cagccggact acatgtacca
    14581 gcggttgtaa tgattatgcc gatgcatttt gccacgacgc tagcgcgcgc ggtttcgccg
    14641 attactgcgg tggtggtcgt tacgtcagga attgcaggcg tttcgccttt tgcggtggtg
    14701 aagcgaacag cgatccccat ggcagtcggt ttcgtggtga atatgattgc cacaatcacg
    14761 ctattttatt aagccattaa aagacaaaac aggccaccag ggcctgtttt tgtattactt
    14821 cacaacgcgt aatgccggtc gaccaccgcg tggtggctgc ggaggttcat cgtcaggatg
    14881 agtgtcatca tcgtgatctg gcttgtcgcc atcaataacc gacataacgg tttcgttgtc
    14941 tgccgatgcc tcttcatcat tcatgatgct ggtatcttca tcgtaggcag cttcaggctc
    15001 aaacatcgtg cctgcgccat tttcacgggc gtagatagcc agcacggcag ccagcggcac
    15061 agaaacctga cgcggaatgc cgccaaagcg cgcgttaaag cgtacctcat cattcgccag
    15121 ttccagattg ccgacagcac gcggcgcaat gttgagtacg atttgcccgt cacgcgcata
    15181 ttccatagga acctgcacgc cagggagcgt cacatccacc accaagtgcg gcgtgagctg
    15241 gttatccagc aaccactcat agaatgcacg cagcagatag ggacgacgtg gtgttagctg
    15301 tgacaaatcc atacagatta actccggccc agacgcattt cacgttctgc ttcagttaaa
    15361 gaagcaagga aagagtcacg ctcaaagacg cgggtcatat agcctttcag ctctttcgca
    15421 cccgggccgc tgaactcgat gcccagttgc ggcagacgcc acagcagcgg agcaagatag
    15481 caatcgacca ggctgaactc atcgctcagg aagtacggct tctgaccgaa gaccggcgca
    15541 atcgccagca gttcttcgcg cagttgctta cgtgcggcat ctgcttcaga agctgaaccg
    15601 ttgatgatgg tgttcatcag cgtgtaccag tctttttcga tgcgatgcat gtacagacgg
    15661 ctttcaccgc gagctaccgg gtaaacaggc atcagtggcg gatgcgggaa acgctcatcc
    15721 agatattcca taatgatgcg agattcccac agggtcagct cacgatccac cagggtcgga
    15781 acgctctgat tcgggttgag gtcaatcaga tcctgaggcg gattgtcctt ttccacgtgt
    15841 tcgatctcga aacttacacc tttctcagcc agcacaatgc ggacctgatg gctatagatg
    15901 tcagtaggac cggaaaacag cgtcattacc gaacgtttgt tggcagcgac agccatgaaa
    15961 acctccaggt atagtcagaa tttttactgc taccagccac caggtggcca gtcagaagtt
    16021 gtgttaccca gtaaggaacg actctctttg ttcgaaaatc aaacaaaaaa tgagcaatac
    16081 ccgacatttg ggcagaaaat tggatgatag tttaccagat tttgcgacct ttgtggtgag
    16141 tcgatgccgg aaatggggaa aaagagatgc gctttagtct gaaatagttg acttagtccc
    16201 ttattggcga tgtggttttt gttttgcctg tctgtcagac ggtagcaaaa agcaactttc
    16261 caatttttac gctgattcag aatttaacca taaaaaaacc cgccgaagcg ggttttttcg
    16321 caaattgttt tctgccggag cagaagccaa ttaacgtttg gagaactgcg gacgacgacg
    16381 tgctttacgc agaccgactt tcttacgttc aacctgacga gcgtcacgag taacgaagcc
    16441 agctttacgc agttcagaac gcagggactc gtcgtattcc atcagagcgc gggtgatacc
    16501 gtgacggatc gcaccagcct gaccagagat accaccacct ttaacggtga tgtacaggtc
    16561 cagtttctca accatgtcga ccagttccag cggctgacga actaccatgc gagcagtttc
    16621 acgaccgaag tactgttcca gagaacgttg gttgattacg attttaccgt tgcccggttt
    16681 gatgaaaacg cgagctgcgg aacttttgcg gcgaccagtg ccgtagtatt gattttcagc
    16741 cattgcctat aatcccgatt agatgtcaag aacttgcggt tgctgtgccg cgtggttgtg
    16801 ctcgttaccc gcgtaaactt tcagtttacg gaacatagca cgacccagcg ggccttttgg
    16861 caacatgcct ttaaccgcga tttcaatcac acgctcagga cggcgagcaa tcatctcttc
    16921 aaaggtcgct tgtttgatac caccgatgtg gccggtgtgg tgatagtaca ctttgtcagt
    16981 acgcttgttg ccggttacag caactttgtc agcgttcaga acgatgatgt aatcaccggt
    17041 atctacgtgc ggagtgtatt ccgctttgtg cttaccgcgc aggcgacgag ccagttcagt
    17101 agccagacgg cccagagttt taccggtcgc gtcaacaaca taccagtcgc gttttacggt
    17161 ttctggttta gctgtaaaag ttttcattaa aagcttaccc aataaatagt tacacgttgg
    17221 tgaacaccca aacgtcttca attgttgagg ttcacacgac aaagtccggc aaacctaccc
    17281 cttcgaatag cctatgccag cacacaaaaa gttttgggaa aaaaactttc ttgtaacgtg
    17341 gggtcgcagg attatagaga agtcggggtc aaagatcgac ccctttttgt gatttgtgac
    17401 aggttttaac ccgccaaatg ctcgcgcttc agatactctt cgctttgcat ctcttgcaga
    17461 cgtgacaggc aacgctggaa ctcaaacttc agccgatcgc cctgataaat ttcatacagc
    17521 ggcacttctg cactcaccac taatttgaca tggcgctcgt aaaactcatc caccagcgca
    17581 ataaagcgcc gcgcttcgct ctccatcaac cgcgtcataa ctggtacatc aaacaacatg
    17641 accgtatgaa agagacgtga gagcgcaata tagtcatgct gactgcgggc gtcgacgcac
    17701 agcgtagtaa aagagaccgc cagcgtctgg ttctcgacgc ccattgtcgc caatggccga
    17761 tggttgattt ctaacgtcgg tgaattttct cgtttcgccc ccgccagcgc caaccatagt
    17821 ttatccatct gcgcccgggt ttcatcgttg agtggcgaaa gccacagatg cgcctgagtg
    17881 agtgtacgca gtcgataatc aacaccagcg tccacgttca ttacatcaca atgctgttta
    17941 atggcatcga ttgcaggcag aaaacgcgca cgttgcaggc catttcgata aagttcgtcc
    18001 ggcggaatat ttgacgtcgc taccagggta ataccgcggg tgaacagggc tttcatcaga
    18061 ccgccaagta gcatggcgtc ggtaatatca gaaacaaaaa attcgtcaaa acagagcacg
    18121 tcagtttcgg ctttaaagcg atcggcaata atttccagcg gatcggtctg cccctgtaag
    18181 gcagttagct cttcatgcac ccgcagcata aaacggtgaa agtgcaggcg ctgtttccgc
    18241 tctcccggca ggctttgata gaaaaggtcc atcagccagg ttttcccgcg tcctacaccg
    18301 ccccacatat ataagccacg cactggcgta tgctttgtgt cttcgcgttt accccacagc
    18361 ttaccgaccc gcgccattag cccactcgtc ctgggggctg gtggcctgct attgatgagt
    18421 tcctgataaa taatttccag gcggctgacg gcctcttttt ggacgtcgtc gggttgatgg
    18481 ctgccttcat taagcgcctt caggtattgc gatgttgggg taacgctttg catgatctta
    18541 ttgttattcc ttgaataatc ggtgcgccgt tgttcacggt tgacgaaaaa aaggccgttc
    18601 tacactacgc gatatgcagt cgggattcca cttctgtgga attaacggtt atagtggcat
    18661 aatcagccgc aggcatggag cctgaagcca acaccctacg gaaacaaaag acaacgggag
    18721 atgttcatga cctgggaata tgcgctaatt gggttagtcg tcggcatcat tattggtgct
    18781 gtggccatgc gttttggtaa tcgtaaacta cgccagcaac aggcgttgca gtacgaactg
    18841 gaaaagaata aagctgaact ggacgagtat cgcgaagagc tggttagcca ctttgcccgc
    18901 agcgcggaat tactggatac catggcgcac gactatcgcc agctgtatca gcacatggcg
    18961 aaaagctcca gcagcctgct gccggaactg tctgctgaag caaacccgtt ccgtaatcgt
    19021 ctggcagagt ctgaagccag caacgatcag gcaccggtgc agatgcctcg cgactattct
    19081 gaaggcgcat ccggcctgct gcgtactggc gcgaagcgcg actaatttat ttttcgggcg
    19141 cagcaattgc gccctcctct tctctccctc cccgactatc atttaatctg gtgtctcatt
    19201 gttagccgtc tgaaaattca ataacatcaa actgttttga atctcttttc ttatcattca
    19261 ggtacgagag caggaataat gaaaaaacaa acccagctgt tgagtgcatt agcgttaagt
    19321 gtcgggttaa ctctctcggc gtcatttcag gccgtcgcgt cgattccagg ccaggttgcc
    19381 gatcaggccc ctctccccag tctggctcca atgctggaaa aagtgcttcc ggcagtggtg
    19441 agcgtacggg tggaaggaac ggccagtcag ggacagaaaa tcccggaaga attcaaaaag
    19501 ttttttggtg atgatttacc ggatcaacct gcacaaccct tcgaaggttt aggttccggt
    19561 gtcatcatca acgccagtaa aggctatgtg ctgaccaaca accatgtgat taatcaggca
    19621 cagaaaatca gtattcagct caatgatggg cgcgagtttg atgcaaaact gattggtagc
    19681 gatgaccaga gcgatatcgc cctgttacaa attcaaaacc cgagcaaatt aacgcaaatc
    19741 gctattgccg actccgataa attgcgcgtc ggtgattttg ccgtagcggt cggtaaccca
    19801 tttggccttg ggcaaaccgc cacctctggc attgtttccg cattaggccg cagcgggttg
    19861 aatcttgaag gtctggaaaa ctttatccag acagatgctt ccattaaccg cggtaactcc
    19921 ggcggtgcac tattaaacct taacggtgag ttaattggca tcaacactgc aatccttgcg
    19981 cctggcggcg ggagcgtcgg gattggattt gccatcccca gtaatatggc gcgaacactg
    20041 gcgcagcagc ttatcgactt tggtgaaatc aaacgcggtt tgttaggcat caaaggcacc
    20101 gagatgagtg ccgatatcgc caaagccttc aaccttgacg tgcagcgtgg cgcgtttgtc
    20161 agcgaagtgt tgccaggttc tggctcggca aaagcgggcg tcaaagcggg cgatattatt
    20221 accagcctca acggcaaacc gctgaatagc tttgctgagt tgcgctctcg tatcgcgacc
    20281 accgagccgg gcacgaaagt gaagcttggc ctgctgcgta acggcaaacc actggaagta
    20341 gaagtgacgc tcgataccag cacctcttcg tcggccagcg ctgaaatgat cacgccagcg
    20401 ctggaaggtg caacgttgag cgatggtcag ctaaaagatg gcggcaaagg tattaaaatc
    20461 gatgaagttg tcaaaggaag cccagctgct caggctggct tgcaaaaaga cgatgtgatc
    20521 attggcgtca accgcgatcg ggtgaactcg attgctgaaa tgcgtaaagt gctggcggca
    20581 aaaccggcca tcatcgccct gcaaattgta cgcggcaatg aaagcatcta tctgctgatg
    20641 cgttaatgtc gtaaaccggg catcaggctt acgtgtgatg tccggttaac tcgtggtatg
    20701 ctgctgccgt tccctttttt aatgacgcct ccatcatgtt tgtgaagctc ttacgttccg
    20761 ttgcgattgg attaattgtc ggcgctattc tgctggttgc catgccttcg ctgcgcagcc
    20821 ttaacccgct ttccactccg caatttgaca gtaccgatga gacgcctgcc agctataatc
    20881 tggcggttcg ccgcgccgcg ccagcggtgg ttaacgttta caaccgtggt ttgaacacca
    20941 actctcacaa ccagcttgag atccgcaccc tgggatccgg tgtaatcatg gatcaacgcg
    21001 gttatatcat caccaataaa cacgtcatca acgacgccga tcagatcatc gtcgccttac
    21061 aggatggacg tgtatttgaa gcattgctgg tgggatctga ctctctaacc gatctggcgg
    21121 tacttaaaat taatgccact ggcggtttac ctaccattcc gatcaatgca cgtcgcgtac
    21181 cgcacattgg cgacgtggta ctggcgatcg gtaacccgta caacctcggg cagaccatta
    21241 cccaggggat tattagtgct acgggtcgaa tcggtctgaa cccgaccggg cggcaaaact
    21301 tcctgcaaac cgatgcttcc attaaccacg gtaactctgg cggcgcgctg gtgaactcgc
    21361 tgggagaact gatgggcatt aacacgctgt cgtttgataa gagtaacgat ggcgaaacgc
    21421 cggaaggtat cggctttgcg attcctttcc agttagcaac caaaattatg gataagctga
    21481 tccgcgatgg tcgcgtgatc cgcggctaca ttggtatcgg cggacgcgag atcgcaccac
    21541 tgcacgcgca gggcggtggt atagatcaac tgcaagggat cgtggttaat gaagtgtcac
    21601 ctgacggccc ggcggcgaat gcgggtattc aggtcaacga tctgattatt tcggtggata
    21661 acaaaccggc catctctgct ctggagacga tggatcaggt ggcagaaatt cgccctggtt
    21721 cggtgatccc ggttgtagtg atgcgtgatg ataagcagtt aacgctgcag gtcaccattc
    21781 aggaatatcc ggcaaccaat taagtcgagt gctcaaaaca aaaaaccgga gtctgtgctc
    21841 cggtttttta ttattcgcta attaattact tattaacgaa ctcttcgccc agggcgatat
    21901 ctttcttcag cgtatccagc ataccttcca gtgcgctctg ttcaaatgcg ctcagggtac
    21961 cgatagattt acgctcttcc acgccgtttt tacccagcag cagcggttga gagaagaaac
    22021 gggcgtactg accgtcgcct tcaacgtagg cacattcgac aacgccttgt tcgccctgca
    22081 gtgcacgaac cagagacaga ccaaaacgtg cagctgcctg gcccatagac agggttgcag
    22141 acccaccacc ggctttcgct tcaaccactt cagtacctgc gttctggata cgtttggtca
    22201 gatcagccac ttcctgctcg gtaaaactaa cgccaggaac ctgtgacagc agcggcagaa
    22261 tggtaacacc agagtgaccg ccaataaccg gcacttcaac ttcgcctggc tgtttgcctt
    22321 tcagttccgc aacaaaagtg ttggaacgaa tgatatccag cgtggtaacg ccgaacagtt
    22381 tgtttttgtc ataaacaccg gcttttttca gcacttcagc agcaatcgca actgtggtgt
    22441 taaccgggtt agtgataata ccaatgcacg ctttcgggca ggttttcgca acttgctgta
    22501 ccaggttttt cacgatgccg gcgttaacgt taaacaggtc ggaacgatcc atacccggtt
    22561 tacgcgctac acctgcagag ataagaacga catctgcgcc ttccagcgcc ggagtcgcat
    22621 cttcaccaga aaaacctttg attttcacag cagtagggat atggctcaga tcgacagcca
    22681 caccgggagt cactggagcg atatcataca gagagagttc tgaacctgaa ggcagttggg
    22741 tttttaacag tagtgcaagc gcctggccaa taccgccagc agcgccgagg actgcgactt
    22801 tcatcctaaa ctccttatta tattgataaa ctaagatatg ttgctccgct gccgcgacct
    22861 taatccacaa aattgccgtt tacaatgacc acatctcaag aatgtgtagt cacgcaagtt
    22921 tagcgtttat gcatttaatt gccgtaatca ggaacctaac ttacgtaatt aacagtcgct
    22981 tatgcattag cgcaacattc caacaggtgg tgacaatata ccctaccgtt cagccaaaac
    23041 aacatcaatt tgataacaat taatttactt ttaagcagaa tttgcatgcc gtgacgcagg
    23101 catgtttctc aataacgaaa tttgataaaa tcccgctctt tcataacatt atttcagcct
    23161 tcttcagggc tgactgtttg cataaaaatt catctgtatg cacaataatg ttgtatcaac
    23221 caccatatcg ggtgacttat gcgaagctcg gctaagcaag aagaactagt taaagcattt
    23281 aaagcattac ttaaagaaga gaaatttagc tcccagggcg aaatcgtcgc cgcgttgcag
    23341 gagcaaggct ttgacaatat taatcagtct aaagtctcgc ggatgttgac caagtttggt
    23401 gctgtacgta cacgcaatgc caaaatggaa atggtttact gcctgccagc tgaactgggt
    23461 gtaccaacca cctccagtcc attgaaaaat ctggtgctgg atatcgacta caacgatgca
    23521 gttgtcgtga ttcataccag ccctggcgcg gcgcagttaa ttgctcgcct gctggactca
    23581 ctgggcaaag cagaaggtat tctgggcacc atcgctggcg atgacaccat ctttaccacc
    23641 cctgctaacg gtttcaccgt caaagacctg tacgaagcga ttttagagct gttcgaccag
    23701 gagctttaat ctctgccccg tcgcttctgg cggcggggaa aatgttgctt atccctctca
    23761 accccctgct ttcccctgcg attaatttaa cgaatagtgc gttttactgc gacatgtcat
    23821 tcacacaatg aatacataag gtaaaaaa
//
LOCUS       DAPGWB010000068        23768 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.068, whole genome shotgun sequence.
ACCESSION   DAPGWB010000068 DAPGWB010000000
VERSION     DAPGWB010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 23768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23768
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.068"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..3871)
                     /gene="entF"
                     /locus_tag="RHX79_002518"
     CDS             complement(<1..3871)
                     /gene="entF"
                     /locus_tag="RHX79_002518"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin non-ribosomal peptide synthetase
                     EntF"
                     /protein_id="HDV2197673.1"
                     /translation="MSQHLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELTGDVDAPLL
                     ARAVVVGLAQADTLRMRFTEDNGEVWQWVDDALIFELPEIIDLRTNIDPHGTAQVLML
                     ADLQQDLRVDSGKPLVFHQLIHVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTW
                     LRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLAGR
                     SASADILRLKLEFTDGEFRQLATQLSGVQRTDLALALAALWLGRLCNRMDYAAGFIFM
                     RRLGSAALTASGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRD
                     SGRAAGEEPLFGPVLNIKVFDYQLDIPGVQTQTHTLATGPVNDLELALFPDEHGDLSI
                     EILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQINATQV
                     EIPETTLSALVAEQAAKTPDAPALADARYLFSYREMREQVVALANLLRERGVKPGDSV
                     AVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPRF
                     SDVPNLTSLCYNAPLTPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRL
                     LWMQNHYPLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFF
                     AEYGVTTTHFVPSMLAAFVASLTPQTARQNCATLKQVFCSGEALPADLCREWQQLTGA
                     PLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAMMHPVPPGV
                     AGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRS
                     DDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSG
                     LPLDTSALQAQLRETLPPHMVPVVLLQLPQLPLSANGKLDRKALPLPELKAQAPGRAP
                     KAGSETIIAAAFSSLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQFARQVTPGQVM
                     VASTVAKLATIIDGEEDSSRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVLSRYL
                     DPQWSIIGIQSPRPHGPMQTATNLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQG
                     IAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGS
                     TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAEL
                     DIYRQDCAHVDIISPGAFVKIGPIIRAT"
     gene            complement(3868..4086)
                     /gene="ybdZ"
                     /locus_tag="RHX79_002519"
     CDS             complement(3868..4086)
                     /gene="ybdZ"
                     /locus_tag="RHX79_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin biosynthesis protein YbdZ"
                     /protein_id="HDV2197674.1"
                     /translation="MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCALPAGWDIVCQPQ
                     SQASCQQWLEVHWRTLTPANFTQLQEAQ"
     gene            complement(4089..5291)
                     /gene="fes"
                     /locus_tag="RHX79_002520"
     CDS             complement(4089..5291)
                     /gene="fes"
                     /locus_tag="RHX79_002520"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308651.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin esterase"
                     /protein_id="HDV2197675.1"
                     /translation="MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYS
                     TIKRVWIYITGVTDHHQNSQPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIF
                     SAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGRGHAVSALEMPQAPLQPGWDCPQA
                     PEIAAKEIIWKSERLKNSRRVWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPVLTSL
                     THRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKAIAPFSDRADRTV
                     VAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEG
                     LRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLW
                     QPLFHDRS"
     gene            5534..7774
                     /gene="fepA"
                     /locus_tag="RHX79_002521"
     CDS             5534..7774
                     /gene="fepA"
                     /locus_tag="RHX79_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore enterobactin receptor FepA"
                     /protein_id="HDV2197676.1"
                     /translation="MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQN
                     LQAPGVSTITADEIRKNPVARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPE
                     NTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA
                     GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLD
                     KTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYS
                     RQGNLYAGDTQNTNSDAYTRSKYGDETNRLYRQNYALTWNGGWDNGVTTSNWVQYEHT
                     RNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWN
                     QQRMKDLSSNTQALTGANTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTP
                     GLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQG
                     CYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVG
                     QNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSII
                     PEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLS
                     ATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYM
                     SVNTHF"
     gene            7949..8569
                     /gene="entD"
                     /locus_tag="RHX79_002522"
     CDS             7949..8569
                     /gene="entD"
                     /locus_tag="RHX79_002522"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415115.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin synthase subunit EntD"
                     /protein_id="HDV2197677.1"
                     /translation="MKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGR
                     KRKAEHLAGRIAAIYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGATALAVVSRQ
                     PIGVDIEEIFSAQTATELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEI
                     QTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIVITLCQHD"
     gene            complement(8691..8843)
                     /gene="hokE"
                     /locus_tag="RHX79_002523"
     CDS             complement(8691..8843)
                     /gene="hokE"
                     /locus_tag="RHX79_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308648.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokE"
                     /protein_id="HDV2197678.1"
                     /translation="MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVL
                     AYEPKK"
     gene            complement(9194..9346)
                     /gene="hokE"
                     /locus_tag="RHX79_002524"
     CDS             complement(9194..9346)
                     /gene="hokE"
                     /locus_tag="RHX79_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001342976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokE"
                     /protein_id="HDV2197679.1"
                     /translation="MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKVVL
                     AYEPKK"
     gene            9788..10906
                     /locus_tag="RHX79_002525"
     CDS             9788..10906
                     /locus_tag="RHX79_002525"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HDV2197680.1"
                     /translation="MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNE
                     ITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAAADHHLEICGGGTHPF
                     QKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPH
                     FIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMID
                     SIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKD
                     YLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKMGASSAIEAL
                     HRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD"
     gene            10972..11220
                     /locus_tag="RHX79_002526"
     CDS             10972..11220
                     /locus_tag="RHX79_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1158 domain-containing protein"
                     /protein_id="HDV2197681.1"
                     /translation="MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVTMFHL
                     MDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD"
     gene            11285..11653
                     /locus_tag="RHX79_002527"
     CDS             11285..11653
                     /locus_tag="RHX79_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HDV2197682.1"
                     /translation="MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSS
                     ELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLIND
                     SWNLVVDGLAKRDQKRVRPG"
     gene            11747..12400
                     /gene="nfsB"
                     /locus_tag="RHX79_002528"
     CDS             11747..12400
                     /gene="nfsB"
                     /locus_tag="RHX79_002528"
                     /EC_number="1.5.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NAD(P)H nitroreductase"
                     /protein_id="HDV2197683.1"
                     /translation="MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQ
                     PWHFIVASTEEGKARVAKSAAGNYVFNERKILDASHVVVFCAKTAMDDAWLKLVVDQE
                     DADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLD
                     AVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV"
     gene            12508..13755
                     /gene="ybdG"
                     /locus_tag="RHX79_002529"
     CDS             12508..13755
                     /gene="ybdG"
                     /locus_tag="RHX79_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel YbdG"
                     /protein_id="HDV2197684.1"
                     /translation="MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVV
                     LRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTC
                     AQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLL
                     IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGA
                     VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRF
                     LDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESILNLRRMTNIGTFRAYLNEY
                     LRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEE
                     FGLRLHQSPTGNDIRSLAGAFKQ"
     gene            complement(13823..15199)
                     /gene="pheP"
                     /locus_tag="RHX79_002530"
     CDS             complement(13823..15199)
                     /gene="pheP"
                     /locus_tag="RHX79_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine transporter"
                     /protein_id="HDV2197685.1"
                     /translation="MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLG
                     IGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFL
                     SGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGET
                     EFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVI
                     MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSN
                     SSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR
                     VSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRF
                     RAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFV
                     AFKTLRRK"
     gene            complement(15301..18444)
                     /gene="cusA"
                     /locus_tag="RHX79_002531"
     CDS             complement(15301..18444)
                     /gene="cusA"
                     /locus_tag="RHX79_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter permease
                     subunit CusA"
                     /protein_id="HDV2197686.1"
                     /translation="MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSD
                     VQVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTD
                     PYWARSRVLEYLNQVQGKLPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQ
                     DWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAG
                     GSSIELAEAEYMVRASGYLQTLDDFNHIVLKASENGVPVYLRDVAKVQIGPEMRRGIA
                     ELNGEGEVAGGVVILRSGKNAREVIAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRA
                     IDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGLNANIMS
                     LGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPAL
                     FISLLIITLSFIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGK
                     IPPESSNPLNRFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQIN
                     EGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVPEVARVFGKTGKAETATDSAPLEMV
                     ETTIQLKPQEQWRPGMTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIG
                     IKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTV
                     ADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSPQALRQLPILTPMKQQITL
                     ADVADIKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDLQKAIAEKVQLKPGTSV
                     AFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLIISSVPFALVGGIWL
                     LWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSLNNPQTFSEQKLDEA
                     LYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSLFI
                     IPAAYKLMWLHRHRVRK"
     gene            complement(18456..19679)
                     /gene="cusB"
                     /locus_tag="RHX79_002532"
     CDS             complement(18456..19679)
                     /gene="cusB"
                     /locus_tag="RHX79_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter periplasmic
                     adaptor subunit CusB"
                     /protein_id="HDV2197687.1"
                     /translation="MKKIALIIGSMIAGGIISAAGFTWVAKAEPPAEKTSTAERKILF
                     WYDPMYPNTRFDKPGKSPFMDMDLVPKYADEESSASGVRIDPTQTQNLGVKTATVTRG
                     PLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVE
                     AQTEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTRFTLKAPIDGVI
                     TAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTL
                     TIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTASEPMLLIPSQALID
                     TGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS
                     GALERMRSESATHAH"
     gene            complement(19695..20027)
                     /gene="cusF"
                     /locus_tag="RHX79_002533"
     CDS             complement(19695..20027)
                     /gene="cusF"
                     /locus_tag="RHX79_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter periplasmic
                     metallochaperone CusF"
                     /protein_id="HDV2197688.1"
                     /translation="MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGEV
                     KGIDLESKKITIHHDPIAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSL
                     LQDIKVSQ"
     gene            complement(20051..21433)
                     /gene="cusC"
                     /locus_tag="RHX79_002534"
     CDS             complement(20051..21433)
                     /gene="cusC"
                     /locus_tag="RHX79_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter outer
                     membrane channel CusC"
                     /protein_id="HDV2197689.1"
                     /translation="MSPCKLLPFCVALALTGCSLAPDYQRPAMPVPQQFSLSQNGLVN
                     AADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQL
                     NGEGSGSWSGNLKGNTATTREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRA
                     VHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQAR
                     GVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLSSQI
                     LLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNF
                     IPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQIS
                     AQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEISL
                     YTALGGGWQQ"
     gene            21590..22273
                     /gene="cusR"
                     /locus_tag="RHX79_002535"
     CDS             21590..22273
                     /gene="cusR"
                     /locus_tag="RHX79_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper response regulator transcription factor
                     CusR"
                     /protein_id="HDV2197690.1"
                     /translation="MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGD
                     YDLIILDIMLPDVNGWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLMKP
                     FAFAELLARVRTLLRRGAAVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLE
                     FFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVG
                     YMLEVPDGQ"
     gene            22263..23711
                     /gene="cusS"
                     /locus_tag="RHX79_002536"
     CDS             22263..23711
                     /gene="cusS"
                     /locus_tag="RHX79_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) sensor histidine kinase CusS"
                     /protein_id="HDV2197691.1"
                     /translation="MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFA
                     EQDINDLKEISATLERVLNHPDETQARRLMTLEDIVSGYSNVLISLADSHGKTVYHSP
                     GAPDIREFTRDAIPDKDARGGEVYLLSGPTMMMPGHGHGHMEHSNWRMINLPVGPLVD
                     GKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSR
                     QIQNITSKDLDVRLDPQTVPIELEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTP
                     ITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKK
                     MLNLADEVGKVFDFFEALAEDRGVELRFVGDKCQVAGDPLMLRRALSNLLSNALRYTP
                     PSEAIVVRCQTVNHQVQVSVENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLA
                     IVKSIVVAHKGTVAVTSDARGTRFVIMLPERE"
BASE COUNT         5695 a         6506 c         6064 g         5503 t
ORIGIN      
        1 gcgttgcgcg aataatcggc ccaattttta caaacgcccc tggagagata atatccacat
       61 gcgcacaatc ctgacgatag atatccagct ctgcaatcca cggcgaccag gcacgttcgg
      121 gactcatacc ttcctgaagt gtgcgctcag caacaaataa cgttgctttt ccatcaaacg
      181 gaacgctatg ggcggtggtt aacaagcgca cagcatcagc gtagttgcct tcaatggtgg
      241 taaacaactc cgttgaagta cttccctgct gtgccgccag gaaggcctcg cgttcgcggt
      301 taatctccgc cagcacttcc gggtccagac cattagcctc tttttcctgc cagttttgcg
      361 tctctggcgg ccaagtatcc agcaaaccaa gaaatgccac ctgttcgcca cgggcacgca
      421 gtcgcgccgc aataccctgc gccagcgtac cgccaaggga ataccccagc aggtaataag
      481 ggccgtgcgg ttgttgctca agtaacgttg ccagatgcgc ttcgcagact tcatccaggt
      541 ttgtcgctgt ctgcatgggt ccatgagggc gcggcgactg aatgccaata atcgaccatt
      601 gtggatcgag ataacgcgag agcacgctaa actgccaggc aaaaccggac gccggatgga
      661 aacaaaacag cgtcgggcca ttaccttcac gcaacggcag aatggtttcg aatcccatgc
      721 gccgggagct gtcctcttca ccatcaataa tcgttgccag tttggcgacg gttgacgcaa
      781 ccatcacctg ccccggcgtc acctgacggg caaactgccg acttaactgc gctgccagtt
      841 tcattgccag tagcgaatga ccgccaagcg cgaagaaatc agcgtcagca tcctgcacgt
      901 cacaccccag caacgacgag aatgccgcgg cgataatcgt ttcactgccc gctttcggcg
      961 cacgccctgg cgcttgtgcc ttcagttcag gcaacggtaa ggctttgcga tccagcttgc
     1021 cgttggcgct aagtggcaac tgcggcagtt gcagcagaac gactggcacc atatgcggcg
     1081 gcaatgtttc acgaagctgc gcctgcaatg cgctggtatc caacggcagg cccgattgcg
     1141 atacaagata gcccaccaac tgacgcgcat caccaccagt ggctgccgcc tggttaatca
     1201 cacaggcgtg ggtaacggct tgttcgacat ccggcagcgc ctgcatcacg cgatcgattt
     1261 cgcccagttc aatacgctgc ccgcgaattt ttagctgatc gtcactgcgc ccgaggtact
     1321 ccaccgcgcc gttatccagc cagcgggcaa cgtctccggt acggtacatc cgttcaccag
     1381 gagcaaaagg atcggcaata aagcggctgg cggtcagatc gggtcgtcca agatacccct
     1441 gcgccagttg aataccggtg agatagagat ctcccgccac acccggcggc accggatgca
     1501 tcatcgcatc aagaatacgc agacccgtat tccataccgg ataaccaatc ggcacactgc
     1561 tgccgcgcac ctgtgccagt tcctcgccaa aagccggata ccagctgaca tctaccgccg
     1621 cttccgtcgg gccatacagg ttatgcaacg gcgcgccggt taactgttgc cattcgcggc
     1681 ataaatcagc cggtaaggcc tcaccactac agaaaacctg tttcaacgtc gcgcaattct
     1741 ggcgagcggt ttgcggcgtc agcgatgcaa caaatgccgc cagcatcgac ggcacaaagt
     1801 gcgtggtcgt tacgccatat tcggcaaaga attgctgcat agcgagcggg tcacggtgcg
     1861 cttccggttc agccatcacc agttttgccc ctgcgataaa cggccagaaa aactcccaca
     1921 ccgagacatc aaaactgcac ggcgtttttt gggcaacgac atcttcgcct gtaagcgggt
     1981 agtgattttg catccataac aggcggttaa cgatagccgt ctgcccgacc attacccctt
     2041 tcggcctgcc ggtggagcca gaggtaaaga tgatataagc cgtgtggtgc ggttgtgaaa
     2101 gttgcagcgg cgcactgccc tggggggtaa gcggggcgtt atagcaaagg cttgttaaat
     2161 tgggaacatc gctaaagcgc ggcagttgat cgtcggtggt aattaacagc gacggacgcg
     2221 catcttccag catcattttc aggcgatcgt ccggatagcc ggtatccagc ggtagccagg
     2281 ccgcgccagc ttcaactatt gcatggagtg ccagggtcaa aaagaccgag cgcggtagtg
     2341 ccaccgccac gctgtcccct ggtttaacgc cgcgctcacg cagcagattc gccagcgcca
     2401 ccacctgctc gcgcatttcc cgatagctga acaggtaacg cgcatctgcc agcgccggag
     2461 catccggtgt ttttgccgct tgttctgcca ccagcgcgct cagcgtggtt tctggaatct
     2521 caacctgagt ggcgttgatc tgcgccagct gcgcatactc acctggcagc ataatatcga
     2581 catcgccgca caacagcgcc ggatccgcgg cgaactgggc aatcagcatt ttcaggcgtt
     2641 cagcatgctg gattaacgtt ggctcatcgt aacgctgttt attggcgagg atctcaatac
     2701 tcaaatcacc gtgttcatcc gggaacaggg ccagttcaag gtcattaacc ggaccggttg
     2761 ccagggtatg ggtttgcgtc tgaacaccag gaatatccag ttggtaatca aataccttga
     2821 tattgagtac cggaccgaac agcggttcct ctcctgccgc tcgcccgctg tcacggacaa
     2881 tttgttcggc atcgtaacgt tgatgacgac gcattttttt cagttgtgct gccagtcggg
     2941 ttgccagttc cggcagcgtt tcttgcgccg caatgtgaat acccaacggt aaaacgttga
     3001 gcacgggtcc gctagccgtc agcgccgccg agcccagtcg acgcataaag ataaatccgg
     3061 cggcatagtc catgcgattg cacaatcgcc ccagccacaa ggctgccagc gcaagggcta
     3121 aatcggtacg ctgcacacct gaaagttgcg tagccagctg gcggaattcc ccgtcggtaa
     3181 attccagttt caggcgcaga atatctgccg aagcgctgcg ccccgctaaa ggtgccggag
     3241 aaagtgacgc gggcggcggc agttgacgac gctgttctgc ccagaatgcc gcatcacgct
     3301 gccaggcttc gctttcgcgg tattgctggt actcttccac tacatcagcg aaaggcgtaa
     3361 acggcgaagc aggcgttggt tcgccacgca gccatgtgca gtaaatattg gcgatctggc
     3421 gagtaatggc cgggaaactg aagccatcga ccagcaaatg gtgataacgc tgataccagt
     3481 accagcggtt atccgcaaca tgtatcagct gatgaaagac cagtggttta ccgctatcga
     3541 cgcgcaaatc ttgttgcaaa tccgccagca ttaatacctg cgcagtaccg tgcggatcaa
     3601 tattggttcg caggtcgata atttctggca gttcgaatat cagcgcatca tcgacccact
     3661 gccagacttc gccgttatct tccgtaaaac gcatccgcaa cgtatctgct tgcgctagtc
     3721 cgacaaccac cgcgcgggcc agtaatggcg catcaacatc tccagttaac tcaacgtaat
     3781 gcgccacgct ccaggcggag ggtaaatccg acagtttttc tgccatccag atgccgggct
     3841 gtgcggcgac caaaggtaaa tgctggctca ttgtgcctcc tgcaactggg tgaaattggc
     3901 cggtgtcaga gtacgccagt ggacttccag ccactgctgg caggacgcct gtgactgcgg
     3961 ctgacacaca atgtcccagc ctgccggtaa ggcgcattgt tgcggccaca gactgaattg
     4021 cccctgcgca ttgcgcaaaa tgtaaaacgc tccctgtgga tcatcgaagg gattactgaa
     4081 tgccatattc aactcctgtc atggaaaagt ggttgccaga ggtcgattag cccctgcatc
     4141 aagccaccgc gccaacaaag cgcatcatgt ccgccgtcaa cctgacgcca gaaaatggat
     4201 tcttttatgg ggtgtaattg cgcatacagc gcctgattgg cccgcataat catcggctcg
     4261 cgaatacccg cttccagcac aatgcgcaga ccttcggcgc taacttcacc agctttaagc
     4321 ttttcaagta acacgccctc ttgctgcccg ccccgatgcg gccaccagta cgatcctgac
     4381 tggcttaata cacagccaaa gcgttcaggc cagtgcagtc cggcatacag cgcggacagc
     4441 ccaccaaaac tctgcccggc gaccacggtg cgatcggcgc gatcgctaaa aggggcaata
     4501 gctttcacca ggggtaataa ctcttgctgt actgccagcc agaaatccgc attacacggc
     4561 agttcgtggg cgcggtgcgt ggtgtcgata gcgtcgatca acacatacac ggcgggagga
     4621 agttgctgac gatgggtcag cgaagtcagc acaggccaga cgggcatact ttgcgcccaa
     4681 aattcgccat cgagcaaaac tgccagcgga cgttcttctg ctgttgcatc gccggtggta
     4741 aaaatccata cacgacgtga atttttcaac cgttcacttt tccagataat ttctttggct
     4801 gctatttctg gcgcttgcgg acaatcccat cccggttgca gaggcgcttg cggcatttcg
     4861 agtgcagaaa cagcgtgccc tcgcccgcct ttccagcttt gtggattcag cggatcggct
     4921 attgcctggg gtaatagttt tcgccagcct tcacgtaatt cgaggcgatc gggggatggt
     4981 gcagaaaaaa tgtcatcgcg ttcggtggga ataaagcagt agctgccgcg ccagttggca
     5041 ttgagttgtg tcgtccactg ccagacatca gtacctgcaa ttcgctgcat cgactggggc
     5101 tggctgttct gatgatgatc ggtcacacca gtgatgtaga tccatacgcg ctttatcgtc
     5161 gagtattctt cagaaccttg gggatcacgc caccagaaag tgacctcaaa catttcgtca
     5221 ttcagacgct gccattccgg gccatgtttc gactgccacc agctctcact tcctactttt
     5281 aacgccgtca caccataacc ccatgtttac tgtgcaattt ttcattgatt gcagaaatat
     5341 attgataata ttattgataa ctatttgcat ttgcaatagc gtaatggcgc gccgtgggaa
     5401 gcgcggacat ttattaacca actgcactgc gtgtctttca ggatcaaagg ttttcgcggt
     5461 agcgggatgc gtcgtgttga ggacgaccat gcccgacagt tgcaattcgt ggcaaaaatg
     5521 caggaataaa acaatgaaca agaagattca ttccctggcc ttgttggtca atctggggat
     5581 ttatggggta gcgcaggcac aagagccgac cgatactcct gtttcacatg acgataccat
     5641 tgtcgttacc gccgccgagc agaacttaca ggcgcctggc gtttcgacca tcaccgcaga
     5701 tgaaatccgc aaaaaccccg ttgcccgcga tgtgtcggag atcatccgta ccatgccagg
     5761 cgttaacctg accggtaact ccaccagtgg tcagcgtggg aataaccgac agattgatat
     5821 tcgcggtatg ggtccggaaa acacgctgat tttgattgac ggcaagccgg taagcagccg
     5881 taactcggtg cgtcagggct ggcgtggcga gcgcgatacc cgtggtgata cctcctgggt
     5941 gccacctgaa atgattgaac gtattgaagt tctgcgtggt ccggcagctg cgcgttatgg
     6001 caacggcgcg gcgggcggcg tggttaacat cattaccaaa aaaggcagcg gtgagtggca
     6061 cggctcctgg gacgcttatt tcaatgcacc agaacataaa gaggaaggtg ccactaaacg
     6121 caccaacttc agcctgaccg gtccgctggg cgacgaattc agcttccgct tgtatggcaa
     6181 cctcgacaaa acccaggctg acgcgtggga tatcaaccag ggccatcagt ccgcgcgtgc
     6241 cggaacgtat gccacgacgt taccagccgg gcgcgaaggg gtgatcaata aagatattaa
     6301 cggcgtggtg cgctgggact tcgcaccatt gcaatcgctg gaactggaag cgggttacag
     6361 ccgccagggt aacctgtatg cgggcgatac ccagaacacc aactctgacg cttacactcg
     6421 ctcgaaatat ggcgatgaaa ccaaccgcct gtatcgccag aactacgcgc tgacctggaa
     6481 cggtggctgg gataacggcg tgaccaccag caactgggtg cagtatgaac acacccgtaa
     6541 ctcgcgtatt ccggaaggtc tggcgggcgg taccgaaggg aaatttaacg aaaaagcgac
     6601 acaggatttc gtcgatatcg atctcgatga cgtgatgctg cacagcgaag ttaacctgcc
     6661 gattgatttc ctcgttaacc agacgctgac gctgggtacg gagtggaatc agcaacggat
     6721 gaaggacttg agttccaata cccaggcgct gaccggggcg aacaccggcg gcgctattga
     6781 tggtgtgagt gccaccgacc gtagcccgta ttcaaaagca gaaattttct cgctgtttgc
     6841 cgaaaacaac atggagctga ctgacagcac catcgtaacg ccggggctgc gtttcgatca
     6901 tcacagtatt gtcggcaata actggagccc ggcgctgaac atatcgcaag gtttaggcga
     6961 tgacttcacg ctcaaaatgg gcattgcccg tgcttataaa gcaccgagcc tgtaccagac
     7021 taacccgaac tacattctct acagtaaagg tcagggctgc tatgccagcg cgggcggctg
     7081 ctatctgcaa ggtaacgatg acctgaaagc agaaaccagc atcaacaaag agattggtct
     7141 ggagttcaaa cgcgacggct ggctggcggg cgtcacctgg ttccgtaacg attatcgcaa
     7201 taagattgaa gcgggctatg tggctgtagg gcaaaacgca gtcggcaccg atctctatca
     7261 gtgggataac gtgccgaaag cagtggttga aggtctggaa ggatcgttaa acgtaccagt
     7321 tagcgaaacg gtgatgtgga ccaataacat cacttatatg ctgaagagtg aaaacaaaac
     7381 cacgggcgac cgtttgtcga tcatcccgga gtacacgttg aactcaacgc tgagctggca
     7441 ggcgcgggaa gatttgtcga tgcaaacgac cttcacctgg tacggtaagc agcagccgaa
     7501 aaaatacaac tacaaaggtc agccagcggt tggcccggaa accaaagaaa tcagtcctta
     7561 cagcattgtg ggtctgagcg cgacctggga tgtgacgaag aatgtcagtc tgaccggcgg
     7621 cgtggacaac ctgttcgaca aacgtttgtg gcgtgcgggt aatgcccaga ccacgggcga
     7681 tctggcaggg gccaactata tcgcgggtgc cggggcgtat acctataacg agccgggacg
     7741 tacgtggtac atgagcgtaa acactcactt ctgatgctaa cgtcagattg ttgacaaagt
     7801 gcgcgtcgtt catgccggat gcggcgtgaa cgccttatcc ggcctacaaa aatcttgcca
     7861 attcaatata ttgcaggacc atgtaggcct gataagcgta gcgcatcagg cagtttagcg
     7921 tttgtcatca gtctctaata tggtcgacat gaaaactacg catacctccc tcccctttgc
     7981 cggacatacg ctgcattttg ttgagttcga tccggcgaat ttttgtgagc aggatttact
     8041 ctggctgccg cattacgcgc aactgcaaca cgctggacgg aagcgcaaag ccgaacattt
     8101 agccgggcgg atcgctgcaa tttatgcgct gcgggaatat ggctataaat gtgtgcccgc
     8161 aatcggcgag ctacgccaac cggtgtggcc tgcggaggta tacggcagta ttagccactg
     8221 cggggctacg gcattggccg tggtttcccg tcaaccgatt ggcgttgata tcgaagaaat
     8281 tttttctgcg caaacagcga ccgaattgac agacaacatt attacaccag cagaacacga
     8341 gcgactcgca gactgcggtt tagccttttc tctggcgctg acactggcat tttccgccaa
     8401 agagagcgca tttaaggcaa gtgagatcca aactgatgca ggttttctgg actatcagat
     8461 aattagctgg aataaacagc aggtcatcat tcatcgtgag aatgagatgt ttgctgtgca
     8521 ctggcagata aaagaaaaaa tagtcataac tctgtgccaa cacgattaat tgacaacatc
     8581 tggtacgatt cgcccgcagc catcactgac cgcgggcgaa agtgtaaagc aggtgcctta
     8641 ccactctgac ctgacaaccg gatatgcggg gattgctccc cgcacaacgg ctacttcttc
     8701 ggttcgtaag cgagaacagc cttaaactca atattacgtt cctttacggt gaactcacac
     8761 agcgagtctc cgaccagaag cgtaaatccc agtaccgtca aacacagcac tatgactgcc
     8821 acaagggcat atttcgtcag catgtttata ttgcctccat gcgaagaagg gactaccatc
     8881 cgagttgttg aggctcggag tggcagcccc aggattgata gaaatatctc ctggggcttc
     8941 atctttccag acctcagagt taacctgaaa ccggaaagct tcaggcaccc gccgttatct
     9001 tacccttcct caacaaaata gctgtttatt tatacagtga atcctgtttc ggacttctgt
     9061 cggcaaaact catcattgct cttaaaacga aatcgcccgc agccatcact gaccgcgggc
     9121 gaaagtgtaa agcaggtgcc ttaccatcct gacctgacaa ccggatatgc ggggattgct
     9181 ccccgcacaa cggctacttc ttcggttcgt aagcgagaac aaccttaaac tcaatattac
     9241 gttcctttac ggtgaactca cacagcgaat ccccgaccag aagcgtaaat cccagcaccg
     9301 ttaaacacag cactatgact gccgcaaggg catatttcgt cagcatgttt atattgcctc
     9361 catgcgaaga agggactacc atccaaattg ttcaggtttg ggtaggtagc cccagggttg
     9421 atagaaatat cgtcctgggg cttcatcttt ccagacctca gagtaaacct gaaaccggaa
     9481 agcttcaggc acccgcagtt atcttaccct tgcttagcaa aatagctgtt tatttataca
     9541 gtaagtcctg tttcggactt ctcactcccc atttgatcaa ctgaagctga acccgttttt
     9601 ttctgcatgc ctcaatcgtc aaaattcttc gccaccagcc agccgtgcca taacttgtca
     9661 cattgcaaaa gtagccaaat tgcttcagtc accatcacca aaaaaagaaa cattccagaa
     9721 cttccgcatc tcgcccagcc gctccgactt ctatactgaa tagaaaacgc caacttaaga
     9781 gaaacctatg ccattacccg attttcatgt ttctgaacct tttaccctcg gtattgaact
     9841 ggaaatgcag gtggttaatc cgccgggcta tgacttaagc caggactctt caatgctgat
     9901 tgacgcggtt aaaaatgaga tcacggccgg agaggtaaag cacgatatca ccgaaagtat
     9961 gctggagctg gcgacggatg tttgccgtga tatcaaccag gctgccgggc agttttcagc
    10021 gatgcagaaa gtcgtattgc aggcagccgc agaccatcat ctggaaattt gcggcggtgg
    10081 cacgcacccg tttcagaaat ggcagcgtca ggaggtatgc gacaacgaac gctatcaacg
    10141 aacgctggaa aactttggct atctcatcca gcaggcgacc gtttttggtc agcatgtcca
    10201 tgttggctgc gccagtggcg atgacgccat ttatttgctg cacggcctgt cacggtttgt
    10261 gccgcacttc atcgcccttt ccgccgcgtc gccgtatatg cagggaacgg atacgcgttt
    10321 tgcctcctca cgaccgaata ttttttccgc ctttcccgat aatggcccga tgccgtgggt
    10381 cagtaactgg caacaatttg aagccctgtt tcgctgcctg agttacacca cgatgatcga
    10441 cagcattaaa gatctgcact gggatattcg ccccagtcct cattttggca cggtggaggt
    10501 tcgggtgatg gataccccgt taacccttag ccacgcggta aatatggcgg gattaattca
    10561 ggccaccgcc cactggttac tgacggaacg cccgtttaaa catcaggaga aagattacct
    10621 gctgtataaa ttcaaccgtt tccaggcctg ccgctatggg ctggaaggcg tcattaccga
    10681 tccgcacact ggcgatcgtc gaccgctaac ggaagatacc ttgcgattgc tggaaaaaat
    10741 cgccccttcc gcacataaaa tgggtgcatc gagcgcgatt gaggccctgc atcgccaggt
    10801 cgtcagcggt ctgaatgaag cgcagctgat gcgcgatttc gtcgccgatg gtggctcgct
    10861 gattgggctg gtgaaaaagc attgtgagat ctgggccggt gactaagtag ggaattgcct
    10921 tacagaagaa tatccctgac aatggtgttt taacttacat ttaacaatgt tatgaaacac
    10981 cctttagaaa ccttgactac cgcagcaggc attttgctga tggctttcct ctcttgcctg
    11041 ctgctgcccg cccccgcact ggggctgacg ctggcacaaa aactggtgac catgttccat
    11101 ctgatggatc ttagccagct ttacacttta ttgttttgtc tgtggttttt agtgctgggc
    11161 gctattgagt attttgttct gcgctttatc tggcgacgct ggttctcgct ggcggattaa
    11221 acgtcgatta tcgccgtact tcgcggcata ctttgcttat tctccttcgc ctaaaggaac
    11281 gtttatggat aagcaatcac tgcacgaaac ggcgaaacgc ctggcccttg agttaccctt
    11341 tgtcgagctt tgctggcctt ttggcccgga gttcgatgtt tttaaaattg gcggcaaaat
    11401 ttttatgctg tcgtcggagc tgcgcggcgt cccctttatc aatctgaagt ccgatccaca
    11461 aaaatccctg ttaaatcagc agatataccc gagcattaag ccagggtatc acatgaataa
    11521 aaagcactgg atttcggtgt atcccggcga ggaaatctcc gaagcgttac ttcgcgatct
    11581 gatcaacgat tcgtggaatc tggtggttga tggtctggct aaacgcgatc aaaaaagagt
    11641 gcgtccaggc taaagcggaa atctatagcg catttttctc gcttaccatt tctcgttgaa
    11701 ccttgtaatc tgctggcacg caaaattact ttcacatgga gtctttatgg atatcatttc
    11761 tgtcgcctta aagcgtcatt ccactaaggc atttgatgcc agtaaaaaac ttaccccgga
    11821 acaggccgag cagatcaaaa ctctcctgca atacagccca tccagcacca actcccagcc
    11881 gtggcatttt attgttgcca gcacggaaga aggtaaagcg cgtgttgcca aatccgctgc
    11941 cggtaattat gtgttcaacg aacgtaaaat acttgatgcc tcgcacgtcg tggtgttctg
    12001 tgcaaaaacc gcgatggacg atgcctggct gaagctggtt gttgaccagg aagatgctga
    12061 tggccgcttt gccacgccgg aagcgaaagc cgcgaacgat aaaggtcgca agttcttcgc
    12121 tgatatgcac cgtaaagatc tgcatgatga tgcagagtgg atggcaaaac aggtttatct
    12181 caacgtcggt aacttcctgc tcggcgtggc ggcgctgggt ctggacgcgg tacccatcga
    12241 aggttttgac gccgccatcc tcgatgcaga atttggtctg aaagagaaag gctacaccag
    12301 tctggtggtt gttccggtag gtcatcacag cgttgaagat tttaacgcta cgctgccgaa
    12361 atctcgtctg ccgcaaaaca taaccttaac cgaagtgtaa ttctctcttg ccgggcatct
    12421 gcccggctat ttcccctcag attctcctga tttgcataac cctgtttcag ccgtcatcat
    12481 aggctgctgt tgtataaagg agacgttatg caggatttaa tatcccaggt tgaagattta
    12541 gcgggtattg agatcgatca caccacctcg atggtgatga ttttcggtat tatttttctg
    12601 accgccgtcg tggtgcatat tattttgcat tgggtggtac tgcggacctt cgaaaaacgt
    12661 gccatcgcca gttcacggct ttggttgcaa atcattaccc agaataaact cttccaccgt
    12721 ttagctttta ccctgcaggg gattatcgtc aatattcagg cggtattctg gctgcaaaaa
    12781 ggcaccgaag cggcagatat tctgactacc tgcgcgcagt tgtggatcat gatgtatgcg
    12841 ctgctttcag tcttctcgtt gctggatgtt attttgaatc tggcgcagaa attcccggcg
    12901 gcatctcagt taccgctgaa agggatattt caggggatta aactgatcgg cgcaatcctg
    12961 gtcggcattt tgatgatctc gctgctgatt ggtcagtcgc cagcgattct gatcagcggt
    13021 cttggtgcaa tggctgccgt gctgatgttg gtttttaaag atccgattct tggtctggtg
    13081 gcaggtattc agctttccgc gaacgatatg ctgaaactgg gcgactggct ggagatgccg
    13141 aaatacggcg cggatggcgc ggtgatcgat attgggttaa ccaccgtcaa agtgcgtaac
    13201 tgggacaata ccattaccac tattcccacc tggtctctgg tttctgactc ctttaaaaac
    13261 tggagcggga tgtcagcatc tggcgggcga cgtattaagc gcagtatcag tattgatgtc
    13321 accagtattc gttttcttga tgaagacgaa atgcaacgtc tgaataaagc gcacttgtta
    13381 aaaccttatt taaccagccg ccatcaggaa attaatgagt ggaatcgcca gcaaggttct
    13441 acggagtcga tattaaacct gcgccgaatg accaatattg gaacctttcg tgcctatctg
    13501 aacgaatatc tgcgtaacca tccgcggatt cgtaaagata tgaccttaat ggtacgccaa
    13561 ctggctccag gtgataacgg tttaccgctc gagatctacg cgtttactaa caccgtggtg
    13621 tggctggaat atgaaagcat tcaggctgat atattcgatc acatatttgc gattgtcgaa
    13681 gagtttggtc tgcgacttca tcagtcgcca accggcaatg atattcgctc tctggcgggt
    13741 gcatttaagc agtaattaaa aaaaccgctc tcatcgaatg gatgagagcg gacatcgttt
    13801 tgtcggatgt agcgtgaatg ccttatttcc gacgcagcgt tttaaatgcc acaaacagga
    13861 atacaatcca caccggcagc aggatcgctg acaagcgcat atcatccatc gtgcacatca
    13921 gcagcaaaat catgccgagg aaggcaatgc aaagatagtt gccgaacgga tagagcagcg
    13981 ccttaaactg tgtttcacgc ccctgacgtc gcatcgctgc acgaaaacgc agatgcgcca
    14041 gacagatcat aatccagttc aacagcagcg ttgctaccac cagcgccatc agcagaccaa
    14101 acgctttttg cggcagcaga tagttgatta ataccaccag cgaagtgatc gctccggaaa
    14161 gcatcagcga gttaatcggc acaccgcgac ggctgacgcg agtcaaaaac ttcggcgcat
    14221 taccctgcac agaaaggcca aacagcatgc ggctgttaga gtaaaccccg ctgttataca
    14281 ctgacagcga tgctaccaga atgacgaagt tcagcgcaga agctaccacg ttgctgtcga
    14341 gattatggaa aatcatcaca aacgggctac tgttggattt cacttccacc cacggataga
    14401 gcgccagtaa aaccaccagt gaaccgatgt aaaacagcag gatgcgatac accacctgat
    14461 ttaccgcttt tggaatgctt ttttccggat cgcgcgcttc agcggcagta atcccaatca
    14521 gctccagacc gccgaaggag aacataatta ccgccagcga caaaatcagc ccattccagc
    14581 cggtggcaaa gaaaccaccg tagcgccaga ggttgtcgat actggctttc tcgccgccgt
    14641 gaccagaaaa cagcagccac aggccaaagc cgatcatacc gatgatcgcc agcactttaa
    14701 tcagcgcaaa ccagaactcg gtttcaccat ataagcgcac gttcaccagg ttaacggcgt
    14761 tgatgataat aaagaaggcg gcagcccaaa tccacgttgg aacatccggg aaccagtact
    14821 gcatatagat gcccgcagcg gtcagctctg ccattcccac cagcacgaac attacccagt
    14881 agttccagcc agagaggaag cccgcaaacg gtccccagta tttataggca aagtgggcaa
    14941 atgaaccgga taccggctct tcgaccacca tctcgccaag ctggcgcata atcaggaaag
    15001 cgatgatccc ggcgacgccg tagcccagca atacagccgg acccgccatc tgaatcgccg
    15061 ggccaatgcc aagaaacaga ccagtaccaa ttgcgccacc cagcgcaatc agttgaatat
    15121 gacggttatg taatccgcga tgaagcgtcg gctcttgatt cgacgcagta tcttccgata
    15181 cggttgacgc gtttttcacg cctttcccct gtgtgtcttt tttgttgagg ggcacctttt
    15241 aacatttagt gcccatcgtc gcaagacaca atccacacgg ttaaacgggg tatcctgctt
    15301 ttatttccgt acccgatgtc ggtgcagcca catcagctta tacgccgccg ggataataaa
    15361 cagcgacagc aaaggtgcgg tgatcatgcc gccaatcatc ggtgcggcaa tccggctcat
    15421 cacctctgaa ccagcccccg ttccccacag aatcggcagc agaccggcga taatcaccgc
    15481 caccgtcatc gctttcgggc gcacgcgcag gaccgcgccg tgatataacg cctcatccag
    15541 cttctgctcg ctgaatgttt gtggattatt caacgacggc acggcctcta tggcgtgacg
    15601 taaatacatc agcatcacca cgccaaattc ggcggcgacc ccggcgaggg cgataaagcc
    15661 agtgcccgtc gccacggaaa gatgaaagcc catccaccac agcaaccaga tgccgcccac
    15721 cagcgcaaac ggtacgctgc tgataatcag caacgcttcg cccacccgac ggaacgccag
    15781 atacaacagc acgaagataa tcatcaacgt catcggcacc atgagtttaa gcttatggtt
    15841 ggcgcgctcc agtagctcga actgcccgga gaatgccacg ctggtgcccg gttttaactg
    15901 cactttttca gctatcgctt tttgcaaatc gtgaaccacc gacaccatgt cacgatcgcg
    15961 ggcatcgata taaatccagc tcgtcgggcg cgcattctcg gttttcagca tcgacggtcc
    16021 ggtagagact ttaatgtcgg ccacgtctgc cagggtgatt tgctgcttca tcggcgtcag
    16081 gatcggcagc tggcgcagtg cctgcggact atcgcgccag ctttgcggat aacgcagatt
    16141 aattggataa cgggcaatcc cttccaccgt ttcgccaacc atcgccccgc ccaccgcaga
    16201 agtcacaaac aactgcacat ccgccaccgt cataccgtaa cgtgcggctt tttcacggtt
    16261 aatctcaacg ttgatatagc gcccaccttc cagccgctcg gcaagcgcag aagctacgcc
    16321 tggcaccgtt cgcgctactt cttcaatttg ctcagccatc gcgtcgatat ccgccagcac
    16381 agtgccggaa actttaatgc cgatggggct tttaatgccg gttgagagca tatcgatacg
    16441 gttacgaatt ggcggcaccc acagattcgc cagccccggc agccgcacgg tgttatccag
    16501 ttcctcaatg attttgtcca tcgtcatgcc tggccgccac tgctcctgcg gcttaagctg
    16561 gatggtcgtt tctaccatct ccagcggagc agaatcggtg gcggtttccg ctttcccggt
    16621 tttgccaaat acccgcgcca cttcaggtac gctcataatt agcttgtcgg ttttttgcag
    16681 catactcgcc gcctctgctg cggaaatccc cggcagcgtc gatggcatat acaacaagtc
    16741 gccttcattg atctgcggta aaaattcccc gccaacttta ttgagcggcc agagaaccgt
    16801 cagcaccgaa agcgccgcca ccagcagcgt ggttttcggc cagtgcagta ctttcagcaa
    16861 cagcggatga taaacacgaa tcaaaaagcg attgagcggg ttactgcttt ccggcggaat
    16921 tttgccacgg atccagtagc ccatcaggat cgggatcact acgatcgcca gcagcgccgc
    16981 acccgccatc gcatacgttt tggtgaacgc caacgggcca aacagacgcc cttcctgccc
    17041 ttccagggtg aagatcggga taaacgacaa cgtgataatc agcagactga taaatagcgc
    17101 cggccccact tcaacagacg catcggtgat cacctgccag cgcgttttat tatccagcgt
    17161 ggcgtcagga tgctggtgct gccactcttc caaccgttta tgtgcatttt cgatcatgac
    17221 gatagcggca tcgaccatcg ccccgacggc aatcgcaatg ccgcccaacg acataatatt
    17281 ggcattcagt ccctggaagt gcatgacaat aaaagcaata cacaacccca gcggcaacga
    17341 aataatcgcc accagcgccg agcgcacatg ccagagaaac agcgcacaga ctaccgccac
    17401 cacaataaac tcttccagca acttgccgct gaggttgtcg atggcgcggt caatgagctg
    17461 gctgcgatcg tatgttgtaa ctatctccac gccttccggc agactacttt tcagcgtttc
    17521 cagtttgtcc ttcacggcgg cgatcacttc tcgggcgttt ttgccggatc gcaggatcac
    17581 caccccgccc gccacttcac cttcgccatt cagttcggca atgccccggc gcatctccgg
    17641 gccaatctgg accttcgcaa catcacgcag ataaacgggc acgccatttt cactggcttt
    17701 taaaacgatg tgattaaagt cgtcgagcgt ttgcagatag ccgctggcgc gcaccatata
    17761 ttccgcttcc gccagttcga tcgacgaacc gcccgcttcc tggtttgaag catccagcgc
    17821 gctttttact tcggctagac tgatgccata ttgcgccagg cgctggggat cgataaccac
    17881 ctgatactct ttcaccacgc cgcccaccga cgccacttcc gcaacgtcag ggatggtttt
    17941 tagctcatat ttgagaaacc agtcctgcaa tgagcgtaaa tcggccagat cgtgcttacc
    18001 gctgcgatcc accagtgcat attcatagat ccagccaaca cccgtggcat ctggtcccag
    18061 ctcggcgctg actcccgcag gcagcttacc ctgtacctgg ttgaggtact ccagcacccg
    18121 cgaacgcgcc cagtacggat cggtgccatc ttcgaaaatg acatacacat aagagtcgcc
    18181 aaactgtgag aaaccgcgca cagtcttcgc gccaggcacc gacaacatgg tggtggttag
    18241 cggataagtc acctgatttt caacgatttg tggtgcctga ccgggatagc tggttttaat
    18301 aataacctgc acatcggaga gatccggcag cgcatccact ggcgtattaa tgatggtcca
    18361 ggtgccccag atgctcagaa acaacgcgcc catcagcacc aaaaaacggt tcgccaccga
    18421 gcgacgaata atccattcaa tcattggtta ttccctcaat gcgcatgggt agcactttca
    18481 gagcgcatcc gctccagtgc gccagaaata ttggcttcgg aatcaatcag gaacaggccg
    18541 ctggaaacca ccttttcacc ttccgccaga ccagagcgta atgcggtgac gccttgcgat
    18601 gcctggaaaa cagcaacgcg tttcggtaca aagcgcccgt cggcatcaac ggtaatcacc
    18661 cgctgttcgc tgccggtatc aatcagcgct tgtgacggaa tgagcagcat cggttcgctg
    18721 gcggtgttga gttgcaacca ggcgttcatg cccggtttta gcgcctcgtc ggcgttgtcg
    18781 acttccagac gcagctgcag cgtgcgggtc gcggcatcca cgccaggtag cagcgtccat
    18841 ttgcggatgg tgagtgtttt atccggtcgc gccggaacgg tgagggtaaa ctgcgaggca
    18901 tctttcacca gccaggcgat ggactccggg atcgcagcag tgacccacac cgggtccata
    18961 ccctgaattt tcgcgaccac gttatctttg gcgatattca ttcccgcgcg cagatcaaac
    19021 gcggtgatca cgccatcaat gggcgctttg agcgtaaagc gagtctggat tttttgcgtg
    19081 gcgatcaggc ggcgaatatc cgcctccggc attcccgcca gtcgcagccg ctcaagaatg
    19141 ccttcagtct gggtcgccgt accgccggtt tcgcgcagca gtaaatactc agtctgcgct
    19201 tccacccagt caggaatggt caggtcgaga agcggtgtgc ccttttgtac tttatcgccc
    19261 acggtaagcg gatacacctt gtcgataaac ccggcagcgc gagcctgcac aatggcatac
    19321 tgatactcgt tgtaactgac attcgccggg aaactctggg caaaagtcag cggtccgcgc
    19381 gtgacggtag ccgttttcac ccccagattc tgcgtctgag tcgggtcaat gcgcacacca
    19441 gacgcagaac tctcttcatc ggcatatttc ggcaccagat ccatatccat aaacggcgat
    19501 ttacctggtt tatcgaaccg cgtattggga tacatcgggt cgtaccagaa taagatttta
    19561 cgttctgcgg tcgacgtttt ttctgcaggc ggttccgcct ttgcaaccca ggtaaaacct
    19621 gccgcagaaa taataccgcc cgcgatcatg ctgccgataa taagcgcgat ttttttcatc
    19681 tcattaaacc tgggttactg gctgacttta atatcctgta ataaagaaag gttgccctgc
    19741 tggacaaaat taaacgccac tttgtcgccg gttttaattt cactcatttt cgtctgcggg
    19801 gtgatggtaa agcgcatggt catctccggc cagttcacag cagcaatcgg atcgtgatgg
    19861 atggtgattt ttttgctttc cagatcaata ccctttacct cgccagtggc actaataacc
    19921 tgtggttgtg cttcgctcat ggtttcatga tgatgttcgt tagcctgggc attaaagcca
    19981 ataacggtaa acagactgaa cattgcgact tgcagtgctt ttttcattta ttctctcctg
    20041 gagttaaaag ttattgctgc caaccgccac caagtgcggt atataaagaa atttcgttaa
    20101 cctgacgggc ataattcagg tcaagtaaag tttgtcgggt tgcaaataac gaacgttcgg
    20161 catccagcac ttccagataa cttactgcgc cgtgctgata taatgcccgc gcccgttgca
    20221 aagtaatttg cagcgatgcc agataacgct gctgggcgct aatttgatcg ttcaggcttt
    20281 gacgtaatgc cagcgcatct gccacttctt taaaggcgtt ctggattttc tgttcataat
    20341 tcactaccga ctgctgctgg cgaatttcgg cgatatccag attggcctgg ttgcgtccgg
    20401 cattaaaaat ggggatctca attttaggaa taaaattcca catcccgctg ctggcgttaa
    20461 ataatgacga cagatcgctg ctggcggttg atattccgct ggtcaggctt atagatggga
    20521 aaaatgccgc gcgtgcggcc ccaatattgg cattagccgc cattaacgcg tgttcagctt
    20581 ccataatatc cgggcgctgc aataagattt gcgacgacaa gcccgccggt aatttaacgc
    20641 tttgcaggct gtcgctgttt actgtctgcg cttgcggcag cttgccgtag cttcccagca
    20701 acagttgcaa tgcattattc gcctgcgcca gttccccctg acgtttagcg atgtcgctgc
    20761 gggtactttc tatcaccccg cgagcctgtt ccagcgccag aacattactg ctacctgtca
    20821 acagttgttt ttcgacaaac gcatatgact gctgataatt acgcagcgtt tcttcagcta
    20881 tttgcaattg cgcatacgcc agttgctgat tgaaatagct ttgcgcgaca ttagaaacca
    20941 gcagaatatg caccgcgcgc tgagcttcct cagtggctaa ataattttgg cgctcggctt
    21001 cgctcatgtt ctttaagcga ccgaaaaaat cgaggtcaaa gctggcgtta aggccggtcg
    21061 aaaactcccg tgtcgtggcg gtattccctt taagattacc gctccagctg ccgctgccct
    21121 cgccattgag ctgtgggtag cggtcggcat cggtcagacg atattgcgcc cgtgcctcct
    21181 gcactttcag cgtcgccatg cgcaaatccc ggttattcac cagcgcctcg ctaatcagcg
    21241 tcttcacctg attatcaaca aaaaaggtgc gccagcccgc gttctgatag ttatctgctg
    21301 cgttaacgag gccgttctgg ctgagtgaga actgctgcgg tacgggcatt gccgggcgct
    21361 gataatccgg tgccagtgaa caaccggtta gcgcaagggc cacacaaaat ggcagaagtt
    21421 tacaaggaga cataggctca taatttctga tgattttatg ccgccaactt tactcgccag
    21481 gctctgattt tccggtgaca ggaaaatgac aaaattgtca ttttgccaat aagcgattgc
    21541 catctgatcc cgctactcta gaattgcccg ggcaacatgc ggaggaaata tgaaactgtt
    21601 gattgtcgaa gatgaaaaga aaaccggaga atacttgacc aaagggttaa ccgaagccgg
    21661 ttttgtggtc gatttggccg acaacgggct gaatggctac catctggcga tgaccggtga
    21721 ttatgatctg ataatcctcg atattatgct gccggacgtg aacggctggg atatcgtgcg
    21781 catgttacgc tccgccaata aagggatgcc gattctgttg cttaccgcgc ttggcaccat
    21841 tgaacatcgc gtcaaggggc tggagttggg ggcagatgac tacctgatga aaccattcgc
    21901 ttttgctgaa ctgctggcgc gggtgcgcac tctcctgcgg cgcggggcgg cggtaattat
    21961 cgaaagtcag tttcaggttg ccgacctgat ggtcgatctc gtcagccgca aagtcacccg
    22021 cagcggcacg cgcatcactt tgaccagtaa agagtttact ctgctggagt tttttctccg
    22081 ccatcagggc gaagtgctgc cccgctcgct tatcgcctcg caggtgtggg acatgaattt
    22141 cgacagcgac actaacgcca ttgatgtggc ggtgaagcgg ctacgcggca aaatcgacaa
    22201 cgactttgag ccgaagctga ttcagaccgt gcgcggcgtg ggctatatgc ttgaggtgcc
    22261 ggatggtcag taagccattt cagcgcccgt tttcgctggc aacccgtctg acctttttta
    22321 tcagcctggc caccatcgcg gcgtttttcg cctttgcatg gatcatgatc cactcagtga
    22381 aagtgcattt tgccgagcag gatattaatg atttaaaaga aattagcgcc acccttgaac
    22441 gggtacttaa tcatcctgac gagacgcaag cccgacgctt aatgacgctg gaagatatcg
    22501 tcagtggtta ttccaacgtg ttgatttccc tggcagatag ccacggcaaa acggtgtatc
    22561 actcccccgg tgcgccggat atccgcgagt ttacgcgtga cgccataccc gataaagacg
    22621 cgcggggcgg tgaggtgtat ctcctttccg gcccgacgat gatgatgcca ggccacggtc
    22681 acgggcatat ggaacacagc aactggcgga tgattaactt gccggttggc ccgttggtgg
    22741 acggcaaacc gatttatacg ctctacatcg cgctttcgat cgattttcat cttcattaca
    22801 taaatgattt gatgaataaa cttattatga ccgcatctgt catcagcatc ctgatcgtct
    22861 ttatcgtgct attggcggta cataaaggtc acgcgccgat ccgcagcgtc agccgtcaaa
    22921 tccagaatat cacctcgaaa gatctcgacg ttcgccttga cccgcagacc gtgcccattg
    22981 agctggaaca gctggtactg tcgttcaacc atatgatcga gcgtattgag gatgtcttta
    23041 cccgccagtc caatttctca gcggatatcg ctcacgaaat tcgcacgccg attaccaatc
    23101 tcatcacgca aacggaaatc gccctcagcc agtctcgcag ccagaaggag ctggaagatg
    23161 tgctctactc taatctcgaa gagctgacgc gaatggcgaa aatggtcagc gatatgctgt
    23221 ttctcgctca ggccgataac aaccagctaa tccccgaaaa gaaaatgctc aacctggcgg
    23281 atgaagtcgg caaagtgttc gattttttcg aggcgttagc ggaagatcgc ggcgtggagt
    23341 tgcggtttgt tggcgacaaa tgtcaggttg cgggcgatcc gctgatgctg cgtcgggcgt
    23401 taagcaacct gctttctaat gccctgcgtt atacgccacc cagtgaggct attgtagtgc
    23461 gctgccagac ggtcaatcat caggtgcaag tttccgtcga aaaccccggt acgcccattg
    23521 cgcccgagca cttaccgcga ttgtttgacc gtttctatcg cgttgaccct tcccgccagc
    23581 gaaaaggtga aggtagcggt attgggctgg cgatagtgaa atcgattgtt gtcgcgcata
    23641 aaggcacggt tgcggtaacg tcagatgcgc gggggacaag gtttgtgatt atgctgccgg
    23701 agagagagtg attattaagt tcaaattcag ggcgtggtgc atcacctcct ggtattgttg
    23761 atcaacaa
//
LOCUS       DAPGWB010000069        23582 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.069, whole genome shotgun sequence.
ACCESSION   DAPGWB010000069 DAPGWB010000000
VERSION     DAPGWB010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 23582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23582
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.069"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            306..671
                     /locus_tag="RHX79_002537"
     CDS             306..671
                     /locus_tag="RHX79_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HDV2197692.1"
                     /translation="MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALW
                     AFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGAL
                     LGSIAWYTRPRPARSRRYE"
     gene            711..1406
                     /locus_tag="RHX79_002538"
     CDS             711..1406
                     /locus_tag="RHX79_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="HDV2197693.1"
                     /translation="MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADD
                     DVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCH
                     AIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQ
                     HRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEG
                     VDHKVIDAFSPAG"
     gene            1473..2891
                     /gene="dcm"
                     /locus_tag="RHX79_002539"
     CDS             1473..2891
                     /gene="dcm"
                     /locus_tag="RHX79_002539"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-cytosine methyltransferase"
                     /protein_id="HDV2197694.1"
                     /translation="MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENH
                     WSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRG
                     FESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEH
                     IRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP
                     AMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHR
                     ERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYR
                     YAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMATGEKDFDDP
                     LNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL
                     EPKIKQAVALRQQEAQHGRRSR"
     gene            2872..3342
                     /gene="vsr"
                     /locus_tag="RHX79_002540"
     CDS             2872..3342
                     /gene="vsr"
                     /locus_tag="RHX79_002540"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VSPR family DNA mismatch endonuclease"
                     /protein_id="HDV2197695.1"
                     /translation="MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA
                     SLPGRPDFVVDEYCCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDIS
                     RLQELGWRVLIVWECALRGREKLTDEALSERLEEWICGEGASAQIDTQGIHLLA"
     gene            complement(3331..4251)
                     /gene="yedA"
                     /locus_tag="RHX79_002541"
     CDS             complement(3331..4251)
                     /gene="yedA"
                     /locus_tag="RHX79_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="drug/metabolite exporter YedA"
                     /protein_id="HDV2197696.1"
                     /translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRF
                     LAAGILLLAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVV
                     VATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSI
                     SWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYL
                     ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVI
                     VFAVVLVTLGKYLFPAKPVVAPVIQDASSE"
     gene            4424..5341
                     /locus_tag="RHX79_002542"
     CDS             4424..5341
                     /locus_tag="RHX79_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HDV2197697.1"
                     /translation="MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLN
                     AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCF
                     EGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVA
                     ITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALG
                     KGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPT
                     VLNLILGFIIGGIVVLGVKAVAKMRGQAH"
     gene            5420..5602
                     /locus_tag="RHX79_002543"
     CDS             5420..5602
                     /locus_tag="RHX79_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2158 domain-containing protein"
                     /protein_id="HDV2197698.1"
                     /translation="MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFH
                     ETELVPGEGSRPAEEV"
     gene            5773..7467
                     /gene="yedQ"
                     /locus_tag="RHX79_002544"
     CDS             5773..7467
                     /gene="yedQ"
                     /locus_tag="RHX79_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416465.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis regulator YedQ"
                     /protein_id="HDV2197699.1"
                     /translation="MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWRE
                     VVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAV
                     TEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYL
                     LRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRH
                     RAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLD
                     GEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWQRL
                     DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQS
                     SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ
                     AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE
                     MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVCASDNA"
     gene            complement(7464..8282)
                     /locus_tag="RHX79_002545"
     CDS             complement(7464..8282)
                     /locus_tag="RHX79_002545"
                     /EC_number="3.1.3.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-3-phosphoglycerate phosphatase-related
                     protein"
                     /protein_id="HDV2197700.1"
                     /translation="MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLSRLREANVPVI
                     LCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQDIDGFPRIISGISHGEISQ
                     VLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQ
                     FTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQQLSGKRPTTLGLGDGPN
                     DAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSAR"
     gene            complement(8580..8807)
                     /gene="yodD"
                     /locus_tag="RHX79_002546"
     CDS             complement(8580..8807)
                     /gene="yodD"
                     /locus_tag="RHX79_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416463.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid resistance protein YodD"
                     /protein_id="HDV2197701.1"
                     /translation="MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHV
                     SVDGREYHTWRELADAFELDIHDFSVSEVNR"
     gene            8970..9158
                     /gene="dsrB"
                     /locus_tag="RHX79_002547"
     CDS             8970..9158
                     /gene="dsrB"
                     /locus_tag="RHX79_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein DsrB"
                     /protein_id="HDV2197702.1"
                     /translation="MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGI
                     WFFNEAGHQDGIFVEKAE"
     gene            complement(9202..9825)
                     /gene="rcsA"
                     /locus_tag="RHX79_002548"
     CDS             complement(9202..9825)
                     /gene="rcsA"
                     /locus_tag="RHX79_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsA"
                     /protein_id="HDV2197703.1"
                     /translation="MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD
                     SQRPSVVFINEDCFIHDASNSQHIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLL
                     ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD
                     QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR"
     gene            complement(10115..10900)
                     /gene="fliR"
                     /locus_tag="RHX79_002549"
     CDS             complement(10115..10900)
                     /gene="fliR"
                     /locus_tag="RHX79_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HDV2197704.1"
                     /translation="MMQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKL
                     GLAMMITFAIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEII
                     GLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIG
                     GEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGF
                     PLTLTVGISLMAALMPLIAPFCEHLFSEMFNLLADIISELPLI"
     gene            complement(10909..11178)
                     /gene="fliQ"
                     /locus_tag="RHX79_002550"
     CDS             complement(10909..11178)
                     /gene="fliQ"
                     /locus_tag="RHX79_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013365797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HDV2197705.1"
                     /translation="MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQI
                     NEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG"
     gene            complement(11188..11925)
                     /gene="fliP"
                     /locus_tag="RHX79_002551"
     CDS             complement(11188..11925)
                     /gene="fliP"
                     /locus_tag="RHX79_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310714.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HDV2197706.1"
                     /translation="MRRLLSVAPVLLWLVTPLAFAQLPGITSQPLPGGGQSWSLPVQT
                     LVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMS
                     PVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQ
                     GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIA
                     LPFKLMLFVLVDGWQLLVGSLAQSFYS"
     gene            complement(11925..12290)
                     /gene="fliO"
                     /locus_tag="RHX79_002552"
     CDS             complement(11925..12290)
                     /gene="fliO"
                     /locus_tag="RHX79_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliO"
                     /protein_id="HDV2197707.1"
                     /translation="MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWLVKRLGF
                     APKRTGVNGLKISASASLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEI
                     PQTDFQSVMKNLLKRSGRS"
     gene            complement(12293..12706)
                     /gene="fliN"
                     /locus_tag="RHX79_002553"
     CDS             complement(12293..12706)
                     /gene="fliN"
                     /locus_tag="RHX79_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HDV2197708.1"
                     /translation="MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGG
                     GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN
                     GYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR"
     gene            complement(12703..13707)
                     /gene="fliM"
                     /locus_tag="RHX79_002554"
     CDS             complement(12703..13707)
                     /gene="fliM"
                     /locus_tag="RHX79_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HDV2197709.1"
                     /translation="MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQR
                     RVVRERLQALEIINERFARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNL
                     NLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKL
                     ALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNIC
                     LPFSMIEPLRELLVNPPLENSRNEDQNWRDNLVRQVQHSQLELVANFADISLRLSQIL
                     KLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK
                     "
     gene            complement(13712..14176)
                     /gene="fliL"
                     /locus_tag="RHX79_002555"
     CDS             complement(13712..14176)
                     /gene="fliL"
                     /locus_tag="RHX79_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HDV2197710.1"
                     /translation="MTDYAISKKSKRSLWIQILVFITLAACASAGYSYWHSHQVAAED
                     KAQQRVVPSPVFYALDTFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLL
                     LLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR"
     gene            complement(14281..15408)
                     /gene="fliK"
                     /locus_tag="RHX79_002556"
     CDS             complement(14281..15408)
                     /gene="fliK"
                     /locus_tag="RHX79_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook length control protein FliK"
                     /protein_id="HDV2197711.1"
                     /translation="MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTD
                     KAAPQLLVATDKPTTKGEPLVSEILADAQQADLLIPVDETPPVINDEQSTSTPLTTAQ
                     TMTLAAVAGNNTAKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDVPSTVLPAEKP
                     TLFTKLTSAQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPH
                     QTQPLPTVAAPVLSAPLGSHEWQQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLK
                     VDDNQAQIQMVSPHQHVRAALEAALPVLRTQLAESGIQLGQSNISGESFSGQQQAASQ
                     QQQSQRTVNHKPLAGEEDDTLPVPVSLQGRVTGNSGVDIFA"
     gene            complement(15405..15848)
                     /gene="fliJ"
                     /locus_tag="RHX79_002557"
     CDS             complement(15405..15848)
                     /gene="fliJ"
                     /locus_tag="RHX79_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FliJ"
                     /protein_id="HDV2197712.1"
                     /translation="MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLID
                     YQNEYRNNLNSDMSAGMTSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWR
                     EKKQRLQAWQTLQERQSTAALLAENRLDQKKMDEFAQRAAMRKPE"
     gene            complement(15867..17240)
                     /gene="fliI"
                     /locus_tag="RHX79_002558"
     CDS             complement(15867..17240)
                     /gene="fliI"
                     /locus_tag="RHX79_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellum-specific ATP synthase FliI"
                     /protein_id="HDV2197713.1"
                     /translation="MTTRLTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGL
                     QLPLGATCVIERQNGSETHEVESEVVGFNGQRLFLMPLEEVEGVLPGARVYAKNISAE
                     GLQSGKHLPLGPALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNPLQRTPIEHVLD
                     TGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKD
                     FIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTR
                     YAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDD
                     QQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFK
                     QLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYLQQGIFERADWEASLQGLE
                     RIFPTVS"
     gene            complement(17240..17926)
                     /gene="fliH"
                     /locus_tag="RHX79_002559"
     CDS             complement(17240..17926)
                     /gene="fliH"
                     /locus_tag="RHX79_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HDV2197714.1"
                     /translation="MSDNLPWKTWTPDDLAPPQAEFVPMVEPEETIIEEAEPSLEQQL
                     AQLQMQAHEQGYQAGIAEGRQQGHEQGYQEGLARGLEQGLAEAKSQQAPIHARMQQLV
                     SEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK
                     PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQE
                     LCRLAAPGVV"
     gene            complement(17919..18914)
                     /gene="fliG"
                     /locus_tag="RHX79_002560"
     CDS             complement(17919..18914)
                     /gene="fliG"
                     /locus_tag="RHX79_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HDV2197715.1"
                     /translation="MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANV
                     TQISNKQLTDVLAEFEQEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRD
                     TASGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLR
                     IATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAV
                     REFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLR
                     NMSQRAADILRDDLANRGPVRLSQVENEQKAILLIVRRLAETGEMVIGSGEDTYV"
     gene            complement(18907..20565)
                     /gene="fliF"
                     /locus_tag="RHX79_002561"
     CDS             complement(18907..20565)
                     /gene="fliF"
                     /locus_tag="RHX79_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HDV2197716.1"
                     /translation="MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAK
                     APDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASGAIEVPADKVHELRLRLAQQGL
                     PKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPS
                     LFVREQKSPSASVTVNLLPGRTLDEGQISAIVHLVSSAVAGLPPGNVTLVDQGGHLLT
                     QSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNIHAQVTAQLDFASKEQTE
                     EQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQPAPANNAPISTPPANQNN
                     RQQQASTTSNSGPRSTQRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGK
                     PLPLSNEKMKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGGELPFWQQQAFIDQ
                     LLAAGRWLLVLLVAWLLWRKAVRPQLTRRAEAMKAVQQQAQAREEVEDAVEVRLSKDE
                     QLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWINNDHE"
     gene            20780..21094
                     /gene="fliE"
                     /locus_tag="RHX79_002562"
     CDS             20780..21094
                     /gene="fliE"
                     /locus_tag="RHX79_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HDV2197717.1"
                     /translation="MSAIQGIEGVISLLQATAMSARAQDSLPQPTISFAGQLHAALDR
                     ISDTQTAARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSM
                     QV"
     gene            21428..21760
                     /gene="emrE"
                     /locus_tag="RHX79_002563"
     CDS             21428..21760
                     /gene="emrE"
                     /locus_tag="RHX79_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMR family multidrug efflux protein EmrE"
                     /protein_id="HDV2197718.1"
                     /translation="MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASF
                     WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN
                     LLSRSAPH"
     gene            21929..22480
                     /gene="ybcL"
                     /locus_tag="RHX79_002564"
     CDS             21929..22480
                     /gene="ybcL"
                     /locus_tag="RHX79_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Raf kinase inhibitor-like protein YbcL"
                     /protein_id="HDV2197719.1"
                     /translation="MKKLIVSSVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGF
                     GCEGGNTSPSLTWSGAPEGTKSFAVTVYDPDAPTGSGWWHWTVANIPATVTYLPADAG
                     RRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKIWALKTDKIPVDSNSSGA
                     LVGYMLNANKIATAEIIPVYEVK"
     gene            22490..23287
                     /locus_tag="RHX79_002565"
     CDS             22490..23287
                     /locus_tag="RHX79_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2197720.1"
                     /translation="MLAKDRTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINW
                     ETHSLTVDNNQIILFPCGYEFYIANYPEAGLYLAEMLYYPIDLIEKFQNLYAITDQIR
                     NTTGFCLPQNPELIYCWEQLKTSISRGFSTQIQEHLAMGVLLSLGAHHVNCLLLSDSK
                     QSLISRCYNLMLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNA
                     LSAIQTTVKPISEIARENGYKCPSRFTERFHNRFKITPRELRKASRE"
BASE COUNT         5720 a         5917 c         6135 g         5810 t
ORIGIN      
        1 attgttgcgc caaacggctg gtgtgatcac gcgcacatta atgaaggcat aaaaaaaagc
       61 cggcatcatg ccggcccaaa aaatataaac aagacgataa aaggctaata acggaggcat
      121 catgacacag aaaaataaaa aggtataatt gtattcagtg ctaatatatt gattaaatga
      181 attaataaag tcgatctcaa agataaataa aatcgctcaa aacgattttt cctgtattca
      241 ctgccgttgc gcaaaaatta tctatttgtt caaaaaatga gtgagtcttg actggctcat
      301 ccaatgtgga aaaatgtgac ttttatcaca taatagtact aagtctgaat tttccgggtt
      361 atctcaaaat ggaatacggt tcgacaaaga tggaagagag actctctcgc agccctggtg
      421 gcaaactggc tttgtgggct ttctatacat ggtgtggcta tttcgtctgg gcaatggcgc
      481 gttacatctg ggtgatgagc cggatccccg atgccccggt gtcgggattt gaaagcgatt
      541 taggctctac cgcgggaaag tggttagggg cactggtcgg atttttattt atggctctgg
      601 tcggggcatt gttaggcagc attgcctggt acacccgacc tcgtcccgca cgtagcagac
      661 gctatgaata aaaactgcta aggtggcgac tctttggcaa cggagcgcgt atggacttac
      721 aacactggca ggcacagttc gaaaactggt tgaaaaacca tcatcagcac caggacgcgg
      781 cccatgacgt gtgtcatttt cgccgcgtct gggctacggc acagaagctg gcggcagatg
      841 acgatgtcga tatgctggtg attttaaccg cctgttattt tcacgatatt gtgagcctgg
      901 cgaaaaatca tccgcaaagg cagcgttctt caatcctggc ggcagaagag acgcgtcgcc
      961 tgctccgtga agagttcgag caatttccgg cggagaaaat cgaggccgtt tgtcatgcca
     1021 ttgccgctca cagtttcagc gcgcaaatcg cccccttaac aacggaagct aaaatcgtcc
     1081 aggatgcgga tcggctggaa gccctggggg cgattggcct ggcgcgcgtg tttgccgttt
     1141 caggggcatt gggcgtggcg ctgtttgatg gtgaagatcc gttcgcacag catcgcccgc
     1201 ttgatgataa acgctacgcg ctggatcatt tccagactaa gttgctgaag ctaccgcaaa
     1261 ccatgcaaac cgcaagaggc aagcagctgg cgcagcacaa cgcgcatttt ttagtcgagt
     1321 ttatggcgaa gctcagtgcc gaactggcgg gggagaatga aggtgtcgat cacaaggtga
     1381 tagatgcgtt ttcacccgcg ggataagcgc gtggccctaa atggctgtaa ttatgttaac
     1441 ctgtcggcca tctcagatgg ccggttaaat ctatgcagga aaatatatca gtaaccgatt
     1501 catacagcac cgggaatgcc gcacaggcaa tgctggagaa actgctgcaa atttatgatg
     1561 ttaaaacgct ggtggcgcag cttaatggtg tgggtgagaa tcactggagc gcggcaattt
     1621 taaaacgtgc gctggcgaat gactcggcat ggcaccgttt aagtgagaaa gagttcgccc
     1681 atctgcaaac gttgttaccc aaaccaccgg cacatcatcc gcattatgcg tttcgcttta
     1741 tcgatctatt tgccggaatt ggcggcatcc gtcgcggttt tgaatcgatt ggcggacaat
     1801 gcgtgtttac cagcgaatgg aacaaacatg cggtacgcac ttataaagcc aaccattatt
     1861 gcgatccggc gacgcatcat tttaatgaag atatccgcga tatcaccctc agccataaag
     1921 aaggcgtgag tgatgaggcg gcggcggaac atattcgtca acacattcct gaacacgatg
     1981 ttttactggc cggtttccct tgtcagccat tttcgctggc tggcgtatcg aaaaagaact
     2041 cgctcgggcg ggcgcacggt tttgcctgcg atacccaggg cacgctgttt tttgatgtgg
     2101 tacgcattat cgacgcgcgt cgtccggcga tgtttgtgct cgaaaacgtc aaaaacctga
     2161 aaagtcacga ccagggtaaa acgttccgca tcatcatgca gacgctggac gaactgggct
     2221 atgacgtggc tgatgcagaa gataacgggc cagacgatcc gaaaatcatc gacggcaaac
     2281 attttctgcc gcagcaccgt gaacgcatcg tgctggtggg ttttcgtcgc gatctgaatc
     2341 tgaaagccga ttttaccctg cgtgatatca gcgaatgttt ccctgcgcag cgagtgacgc
     2401 tggcgcagct gctggacccg atggtcgagg cgaaatatat cctgacgccg gtgctgtgga
     2461 agtacctcta tcgatatgcg aaaaaacatc aggcgcgcgg taacggcttc ggttatggaa
     2521 tggtttatcc gaacaatccg caaagcgtca cccgtacgct gtctgcgcgt tattacaaag
     2581 atggcgcgga aattttaatc gatcgcggct gggatatggc cacgggtgag aaagactttg
     2641 acgatccgct gaatcagcaa catcgtccac gtcggttaac gcctcgtgaa tgcgcgcgct
     2701 taatgggttt tgaagcgccg ggagaagcga aattccgcat tccggtttcg gacactcagg
     2761 cctatcgcca gttcggtaac tcggtggtcg tgccggtctt tgccgcggtg gcaaaactgc
     2821 ttgagccaaa aatcaaacag gcggtggcgt tgcgtcagca agaggcacaa catggccgac
     2881 gttcacgata aggccactcg cagcaaaaat atgcgcgcga ttgccacgcg tgatacggcg
     2941 attgagaagc gcctcgccag tctgttaacc gggcagggcc tggcgtttcg cgttcaggac
     3001 gccagtctgc ccggacgtcc ggattttgtc gttgatgaat attgttgcgt gatatttacc
     3061 cacggctgct tctggcacca tcatcactgc tatctgttta aagtgcctgc gactcgaacc
     3121 gagttctggc tggagaagat aggtaaaaat gttgagcgcg atcgccgcga tatcagtcgc
     3181 ttgcaggaac tcggctggcg cgtattgatt gtctgggagt gcgcgttacg tgggcgcgag
     3241 aagctgacgg atgaagcgct tagcgagcgt ctggaagagt ggatctgcgg cgaaggtgcc
     3301 agcgcgcaga tcgacacgca ggggattcat ttactcgctt gatgcgtcct gaatcactgg
     3361 cgcaactacg ggttttgccg ggaagagata ttttcccaac gtgaccagta ccaccgcgaa
     3421 gacaattacg ccgagcgcca gccattcaat cttcgacagc gtttctccgc ccagtcccgt
     3481 acccagcaag accgcgacca ccgggttaac gtaggcgtag ctggtggcga gagccggact
     3541 gacgttgcgg attaaataca tataagcgtt aatggcgata atcgaaccaa acagcgccag
     3601 atagccaacc gcaaggaagc ctgaaaggga agggagcgcc gtcagttttt cacccgcaat
     3661 catcgacgcg atcattaaca ccacgcctgc cgccaacatc tcaatcgcac ccgccatcat
     3721 ccctacaggt aaggtaatgc gcgagccata aactgagcca aacgcccagc taatcgagcc
     3781 gattaaaatc agaatcgcgc cccacggatt gccgcttaaa tttccaccgc tattgagcat
     3841 gatgattccg gcaagcccaa tggcgatacc cacccattcc agtttgcgcg ttttaatgcc
     3901 aaacaggcgg ctgaagcaca gggtaaagag gggcacggtt gcaaccacta cggcggcgat
     3961 gccggaagga acattttgat gttcggcaac cgttaccatg ccattaccga cagccagcaa
     4021 taacaggcca atcagcgcgg cattgagcag cggacgtagc ggggggagct tgtgtccgcg
     4081 cagtagcaaa aatgccagca ataaaatacc ggctgccagg aatcgcacgc ccgccatcat
     4141 taacggcggc cagctttcca cgccaatccg aatgacaaaa taggttgagc cccaaatgat
     4201 atacaacgca aacagcgcgc caaaaagcgg taacaactgg cggaaacgca taatccctca
     4261 cggtggaaat aaaaaggtgg ttcatagtaa acgtgaaaat cattctgctg gcgagagata
     4321 taattgcact tgattgttaa aaaaatgttg acctgtgaag caagtatcag agctgccgtt
     4381 tttgcttcat acttacaccc ttcaacaata aaaatgagag ggaatgcttt tggccgggag
     4441 tagtttactg acgttgctcg atgatatcgc cacactgctg gacgatatct ccgtgatggg
     4501 caaactggcg gcgaagaaaa ccgccggtgt attaggggat gacttatcgc tcaatgcgca
     4561 acaagtttca ggcgtgcggg ccaaccggga acttcccgtg gtctggggcg tggcgaaagg
     4621 atcgctgatc aataaagtga ttctggtgcc actggcgctg atcatcagtg cgtttatccc
     4681 gtgggcgatt acgccactgt tgatgattgg tggcgcgttt ctctgctttg aaggggtaga
     4741 gaaagtgctg catatgctgg aggcgcgtaa acataaagaa gatccggcgc agagccagca
     4801 gcgtctggag aaactggcgg cgcaggatcc gctgaagttt gaaaaggaca aaataaaagg
     4861 ggcgattcgt accgatttta tattgtctgc cgaaatcgtc gccatcacgc tggggattgt
     4921 ggcagaagcg ccgttgctta atcaggtgct ggtgctttca ggcatcgcgc tggtagtgac
     4981 cgtgggcgtc tacggtctgg taggggttat cgttaagatt gatgacctgg ggtattggct
     5041 ggcggaaaaa tccagcgcgc tgatgcaggc attaggtaaa gggttattga tcattgcgcc
     5101 ctggctgatg aaagcgttat cgattgtcgg cacgctggcg atgttcctcg tcggcggcgg
     5161 gattgtggta catggtattg cgccgctgca tcacgccatt gaacatttcg ccgggcagca
     5221 aagtgcagtg gtggcgatga tattaccgac tgttttaaat ctgattcttg gatttatcat
     5281 cggcggcatc gtggtgctgg gagtgaaagc cgtagcgaaa atgcgcggtc aggcacatta
     5341 atactcgcac aggctattat gcaaaattcg ccatcttcaa ctaaggtgaa caagtttcac
     5401 tcgaaaaaag gaggcgagta tgagctttat ggttagtgag gaagttacgg ttaaagaggg
     5461 cggcccgcgg atgattgtca ctggatactc cagcggtatg gttgagtgtc gttggtatga
     5521 cggttacggg gtcaagcggg aagcttttca tgaaaccgag cttgttccag gggaggggag
     5581 tcgtcctgcg gaagaagttt gaaagggtat cattaacacc aggccggatc acatccggcc
     5641 tggtgtgcca atgcctgcaa tgaatgatag tcgcgtctta tcatgccacc attataaaat
     5701 tatcgctgtt ttgcggtacg ctatcgccag gttatgccag aatcataaaa aagcaggttg
     5761 ggagtcgtca gggtgcagca cgagacaaaa atggaaaacc agagctggtt gaaaaaactc
     5821 gcacgccgcc tggggcctgg tcatgtcgtt aatctctgct ttatcgtggt attgcttttt
     5881 tccaccttgc tcacctggcg tgaagtagtg gtgctggaag atgcctatat ctccagccag
     5941 cgtaatcatc tggaaaacgt agccaacgcg ctcgataagc atttgcagta taacgtcgac
     6001 aaactgatct ttttgcgtaa tggcatgcgc gaagctctcg tagcgccact ggatttcacc
     6061 tctctgcgtg atgctgtaac cgagttcgaa cagcatcgcg acgagcacgc ctggaaaatc
     6121 gaactcaacc gacgacgcac cctgccagtc aatggcgtat cggatgcatt agtcagcgag
     6181 ggaaatctcc tgtctcgcga aaatgaaagc ctcgacaatg aaattaccgc tgcactggaa
     6241 gttggttact tgctgcgact ggcgcacaac tcctcgtcga tggttgaaca ggcgatgtat
     6301 gtctcgcgtg ccggatttta cgtttcgacg cagccgacct tgtttacgcg caatgttcca
     6361 acgcgttatt acggctatgt cacccaaccc tggtttatcg gccattcaca acgagaaaat
     6421 cgtcaccgcg cggtacgctg gttcacttcg caaccggaac acgccagcaa tactgaaccg
     6481 caggttaccg tcagtgttcc ggtagacagt aataactact ggtatggcgt gctggggatg
     6541 agtattcccg tacgtactat gcagcaattt ttaagaaacg ccatcgataa aaacctcgat
     6601 ggtgagtatc agctctatga cagtaagctg agatttttga cctcttccaa tcctgaccat
     6661 ccaacaggga atatttttga tcctcgtgaa ctggccttgc tggcgcaggc gatggaacat
     6721 gacacgcggg gcggcattcg tatggacagt cgctatgtta gctggcaacg tctggaccat
     6781 ttcgacggtg tgctggtgcg cgtccatacg ctaagcgaag gcgtgcgcgg cgatttcggt
     6841 agtatcagca ttgcattaac cctgctgtgg gcgctcttta ccaccatgtt actcatctcc
     6901 tggtatgtga ttcgccggat ggtcagcaac atgtatgttc tgcaaagctc gttgcagtgg
     6961 caggcgtggc acgacacctt aacccgttta tataatcgtg gcgcactgtt cgaaaaagcc
     7021 cgtccgctcg ctaaattgtg tcagacgcac caacatcctt tttctgtcat tcaggtcgat
     7081 cttgaccatt ttaaagcgat taatgaccgc tttggtcatc aggcgggcga ccgtgttctt
     7141 tctcatgctg ccggattaat tagcagttcc ttgcgtgcgc aggacgttgc cgggcgggtc
     7201 ggtggtgagg agttttgtgt gattctgcca ggcgcgagtc tgacggaggc tgcggaggtc
     7261 gcagaacgta ttcgactgaa attaaatgaa aaagagatgt tgatcgccaa gagtacgacg
     7321 atacgcatca gtgcctcgct gggggtaagc agcagcgagg aaaccggtga ttatgatttt
     7381 gaacaactcc agtcactggc tgaccgtcga ctttatctcg ctaaacaggc cgggcgtaat
     7441 cgggtatgcg cgagcgataa cgcttaacgg gcggagaaaa aatggtccag cccttcacgc
     7501 catccttccg gtccttcacg ctgcgttcgc cagacgcggg ccggatcctc atcatgcaga
     7561 tgcacccctt cacggtttag ccctttcaca atcaccgcgt aatccattac ctccagtaag
     7621 ggcgcatcgt ttggcccatc gcccaggcca agtgtggttg ggcgtttgcc tgacaattgt
     7681 tgttgatagg tcgcgataat ccagttggca gcctgatctt ttccggcaga ggcatccagt
     7741 acgtgccaga agcgcgcacc ctgcataaac tgcaagccca gttcgttcag acgagcggta
     7801 aattgtgcca tacgctcgtc actgtcgcgc cagattagcg ttaccgacgc ctcatgcagc
     7861 tgcgtcagcg ccgcctggct acggcttaat cccgtccatt cggcgatggt tgcatcgtcg
     7921 acatcatcaa aagttgtgaa tttaaaatgt tctttctcgc gtagcgtatt taaaacctgg
     7981 ctgatttcgc catggctaat acctgagatg atgcgtggaa aaccgtctat atcctgccat
     8041 tgttcagcaa gctggatcac tgcgccattt tcggcaatca gcggtaaccc ttgtagcccc
     8101 aacgtttttt gcaagtacag catttccgct gaagttttac tgctacagag aatgacggga
     8161 acattcgctt cgcgtaaacg gctgagccag ggggcagccg gttgccagtc ataactatga
     8221 ctgtccagca gggtgccatc aagatcgcta aaaaccagta gtggttgttg aattgaaaac
     8281 atagtcgcgc agtactcccc ttaccaggat gattctcaaa acagcacaaa ttatcaaaga
     8341 tgattttttc gggagcgatc ccgctgacgc cagagccacc aaggggtgac gcacgtcaca
     8401 tttctattca taagtagcgt taatcattca tatcgcgaat attttcttgt cagcgaaaaa
     8461 aattgcggat aaggtgatga acacatcaga tttcctggtg taacgaattt tttaagtgct
     8521 tcttgcttaa gcaagtttca tcccgacccc ctcagggtcg ggattttttt attgtgcatt
     8581 caacgattca cttcagagac gctgaagtca tgaatatcca gttcgaaggc atccgccaat
     8641 tcacgccatg tatgatattc acgtccatcg acgctaacgt gttcagaatc gttctggctg
     8701 cgatgaactt cgctttcgct aatttcattg atcgccgcca gcagggcatc gacatcgacg
     8761 ctgacctcac gttttgcggt atcgctgtac tcttttgcgg ttttcatcat ctttcctcgc
     8821 aaccgttact ctgttgttgc cgccagtcgt taagtccgcc tggcatctct taagtataga
     8881 ccgtcgagaa aatcagcact cgcgcgcgcc tggcgctgcc agaaaaacga aattgttcta
     8941 cactggcaca aagccacagg aggaaaacga tgaaggtgaa tgatcgggta acagtcaaaa
     9001 cggatggcgg tccgcgtcgt cctggcgtgg tactggcagt tgaggagttt agtgaaggca
     9061 caatgtacct ggtttcgctg gaagactacc cgctcggcat ctggttcttt aatgaagcag
     9121 ggcatcagga cggtatcttt gtggagaaag cagagtaatc ttattcagcc tgactggtgg
     9181 gaaaccacca gtcagaatgt gttagcgcat gttgacaaaa ataccattag tcacattatc
     9241 cgtcagtcgg acgacatggt agataacctg tttattatgc gttttgatct tacgtttaat
     9301 attaccttta tgcgatgaaa cggtcttggc tttgatattc atttggtcag agatttgaat
     9361 cgttccctga cctgccatcc acattcgcaa catactcgat tcggttcggc tcaatgataa
     9421 cgtcggcata tttaaaaaag aggttatcgt tgtctctttt ttcagaatat cgccaaggat
     9481 atcgtcgaga gattccggtt taatcgattt agaactgatc aataaatttt ttctgaccaa
     9541 tagatattca tcaaaatgaa cattggcaat tgccataaaa acgataaata acgtattggg
     9601 atgttgatta atgatgtgct tgatgtgctg actgttagaa gcatcatgga tgaaacagtc
     9661 ctcattaata aacaccactg aagggcgctg tgaatcacaa gctatggcaa ggtcatcaac
     9721 ggtttcaatg tcgttgattt ctcttttttt aacccctcta ctcaacagat acccggttaa
     9781 acctagtcgg gtgtaactac ataaatccat aataatcgtt gacatggcat accctcactc
     9841 aatgcgtaac gataattccc cttacctgaa tatttcatca tgactaaacg gaacaacatg
     9901 ggtcacctaa tgcgccactc tcgcgatttt tcaggcggac ttactatccc gtaaagtgtt
     9961 gtataatttg cctggaattg tcttaaagta aagtaaatgt tgcgatatgt gagtgagctt
    10021 aaaacaaata tttcgccgca ggagtatcct ggaagatgtt cgtaggtatt atttttcgga
    10081 taatccttag gataacatga taaacgttac ggaattatat taatggcaat tcactaataa
    10141 tatcagccag caaattaaac atctcactga ataaatgttc gcaaaaaggt gcaattaacg
    10201 gcattaatgc cgccattaaa gagataccga cagtcagagt taatggaaat ccaataacaa
    10261 aaatggataa ttgcggggcc atacgattca gtaaacctaa tgccagattc agggtcagca
    10321 gcagagtaat gagcggtaac gccagcatca gcccgttaag gaaaatcaaa ctccctgctt
    10381 tggtgagtgc cagaaacgca ttgctgttca acggttcgcc accaattggc agggtgtgaa
    10441 aggtatcgac cagcagtgaa atcaaccata aatgaccgtt aaatgtcagg aacagtagta
    10501 acgccagcat atccatgata cgcgctaaaa caggcatatt gagatggctg gccggatcga
    10561 caaacgtcgc aaatgacagc cccatttgca gaccgataat ttcgccagcg gttcgcacag
    10621 cggcaaaggc aaattgcatg gtaaaaccaa gcgcaatgcc gatcaggatc tgctgcacgg
    10681 ccagccacag agcaaagaac gaaaaaacag gaacatcgtt ggcaggtaat gatggggcaa
    10741 tagcgaacgt gatcatcatt gccagaccca gttttacccg tttcggcacg ctgcgttcgc
    10801 tcagaattgg cgcggtagaa atgagcgcca gcacgcgcag taacggccag aagtacagac
    10861 ttagccagga aagccattga tcgcttgtca cctgcatcat tgtacgggct acccgatgat
    10921 atacggcagg ttagtgaaca aggtgcggac gtaatccagc aacagattga gcatccacgg
    10981 tccggcaata ataatggcaa taaatacggc gatgattttt ggaataaacg acagcgtcat
    11041 ttcgttgatc tgggtggcgg cctgcaaaat actgatgata aggcccgtga ccagcgccac
    11101 cagcaacagc ggggcagcca gtgccagcgc gactttcatc gcttcagtcc ccatcatcat
    11161 gaccgattca ggtgtcattt tgcctctcta gctgtaaaag ctctgcgcca gcgaaccgac
    11221 cagcaattgc cagccatcca ccagtacaaa cagcatcagt ttaaagggca gagcaatggt
    11281 ggcggggggg accatcatca tccccaatgc catcaacacg ctggcaatca ccaggtcgat
    11341 aatcaaaaaa gggatgaaaa tcgtgaagcc tatctgaaat gcggttttca actcgctggt
    11401 cacgtaggcc gggagcaaaa tgcgcatcgg cacggcttca ggtccctgca acgggccggt
    11461 attcgctagt ctggcaaaca accctaaatc tgcctcacgg gtctgacgca gcataaactc
    11521 acgtagcggc tgcgcccctt tttccagcgc ctcctgcatt gatattttct cttcgctgaa
    11581 tggctggtac gcatcgacat aaattttgtc gatcaccggt gacataataa aaaaggtcaa
    11641 aaatagtgcc agccccagca atacctggtt aggtggcgcg gagggcgttc ccagcgcgtt
    11701 acgcaataaa ccaaaaacaa tgatgatgcg ggtgaaactg gtcatcatca gtaaaattgc
    11761 cggaataaac gtcaacgagg tgatgaacac cagcgtctgc accgggagcg accagctttg
    11821 tccaccgcca ggcagcggct ggctggtgat acccggcagt tgcgcgaagg cgaggggcgt
    11881 aaccagccag agaaggacag gtgcgacaga caacaaacga cgcatcagga tctcccgcta
    11941 cgcttaagca aatttttcat gaccgactga aaatcggtct gcggtatctc ttctgttggt
    12001 gctgaagggg gaagtttatg cagcagattg atttgccctg cggtaacgcc gagcaccagc
    12061 cgtgcatctt ccacatcgac caccacaacc cgttcacgcg cgcccagcga agcactggcg
    12121 ctaattttca gaccgttaac gccagtgcgt ttcggggcaa atcccaaccg ttttaccagc
    12181 caggcagcag cgaggatcag ggcaataatg gcgatgagtg cgccgctgac ctgcagcagt
    12241 ggcgcagcag aaaccggcgt ggaagattgc acagtagcgt ggttattcat cactaacggc
    12301 tcaggcgacg cattcgctca gacggagtaa tgatatcggt gatccgcacg ccatatttat
    12361 cggcaacgac caccacttcg ccctgggcga ttaaataacc gttgatcaga atatccagtg
    12421 gttcgcccgc cagaccgtcc agcgccacga cggacccttg cgtcagacgc aacagctctt
    12481 tgatggtcat ccgcgtacgg cccagctcga cggtcagctt gaccggaata tccattatca
    12541 ggtcgatatc ctgcaacgtt ccgctgacat caccaccgcc aaattgctgg aacacagcgt
    12601 cggcagcgct tttgctgctg gttgattttt gttcgctcaa cgcttcagcc cacagatcgt
    12661 ccattgcgcc gttgttgtca tcggccggat tattcatgtc actcatttgg gctgttcctc
    12721 gttcagagaa tttaaaatcg ggttaatcaa atgttctatc cgtaacgcat actgaccgtt
    12781 gagagtgccg tactgactgg tcagtaccgg aacgccgtca acatgagcga tgatgcgatc
    12841 gggtttttct atcggcagga cgtcgccggg tttcagtttt aaaatctgcg acaggcgtag
    12901 cgagatatcg gcaaagttgg cgaccaactc cagctgtgaa tgctgcacct ggcgcaccag
    12961 gttatcgcgc cagttctgat cttcattacg cgagttttcc agcggcgggt taaccaacaa
    13021 ttcccgtagc ggctcaatca tgctgaatgg cagacagata ttaaattcgc cggtcaggtt
    13081 gccaatctcc acatggaacg gcgtgttaac cacaatgtcg ttcggcgagg tggtgatatt
    13141 ggtaaatttc acctgcattt ccgaacgcac gtactcaact tccagcggat taatcgcctt
    13201 ccaggcgtcg ctatagcctt caagcgccag ctttaacatg cggttgatga cgcgctgttc
    13261 ggtatgggta aactcgcgac cttccacttt ggtcgggaag cgtccatcgc cgccaaacag
    13321 gttatccacg gcgataaaca ccagactcgg tgaaaacacc accagccctg tgccgcgcag
    13381 cggtttcaga tggataaggt tcaggttggt cggcaccggc aggttgcggg caaattcatg
    13441 gtacggctga atgcggatgg ccccgacggt tatatccggg ctacgacgca gcaggttgaa
    13501 cagccccata cgaaaatggc gggcaaagcg ctcattaatg atttccagcg cctgcaaacg
    13561 ttcgcgcaca acccgtcgtt gggtattcgg atcgtacgga cgaatgtcac tttcgccgct
    13621 aacactggct gtcggttcgt ctttgacttc gctgtcacca ttcaacagcg catcaatttc
    13681 agcttgagaa agaatactat cgcccatgtc gttatcgcag aataaaagcg gtatacagca
    13741 cgtcggtgac atcctgtttc ggttgcccgg caacaagcgg ggtggaaagc gtggttttaa
    13801 tctcggcaat caggtttttc ttgccttctt ctgtcgccag tacggcagca tcctgacgcg
    13861 aaaacagtaa cagcaaacgg ctacggactt ccggcaaata ctcactcagc cgcgagcggg
    13921 tagcttcatc tttcaggcgc agggttatgc cgatataaag tacgcgatct gcatcgccca
    13981 gattgaccgt aaaggtatcc agcgcataga agaccgggga gggcacgacg cgttgctgcg
    14041 ctttgtcttc agcggcaacc tgatgcgaat gccagtagct gtaacctgcg ctggcacagg
    14101 ccgcgagggt aatgaatacc agaatctgga tccaaagcga tcgcttgctt ttcttgctta
    14161 tcgcgtaatc agtcatgtgt tgcggtcttc ctgtgtcgct actgcttatc ggctaattat
    14221 cctgcgtctt gagcgcaaca aagcggggaa aagacgcgga ttacggtgct acctctgacg
    14281 ttaggcgaaa atatcaacgc cgctgttgcc tgttacgcgc ccttgtaaag agacgggaac
    14341 cggaagcgta tcgtcttctt cccccgccag aggtttatgg tttactgtgc gttggctttg
    14401 ctgttgttgg gaagcggcct gctgctgacc actaaagctt tcgccactga tgttgctttg
    14461 ccctaactga atgccacttt cggccagctg cgtacgcagt accggcagcg ctgcttccag
    14521 ggcggcgcgt acatgctgat gcggtgaaac catctggatt tgtgcctggt tatcatccac
    14581 tttgagggag atttgcactt cacctaaatc ctgcgggtgc agacgcaact ctgcactttg
    14641 ttgcccctgg cgggtgaaca gcgaaatatg ctggcttaat gattgttgcc attcgtgaga
    14701 acccagcggt gcactcaaca caggcgcggc gacggtgggc agtggctgtg tctggtgtgg
    14761 agtgattagc gggctggcgg cagcggtcac cggtgaaggt gtgctgatga cttccgcttt
    14821 actctgggct tctgctacca gcggtgttaa tggctgagct ggcgtgccgg gggcatcatc
    14881 aggctgtgct gttgtgagtt gcgcagaagt cagttttgtg aagagcgttg gtttctctgc
    14941 cggtaacacg gttgacggca catcagtcac tttgggcgta ttgtcaaaac ccggcaacat
    15001 cgcaaaaagg gcgctcaggc ttgcggtgac gtcttcattc agatcatccg ctttttcgtc
    15061 ttttgccgta ttgttgccag ccaccgcagc caacgtcatc gtttgagcgg tggttaatgg
    15121 tgttgatgtg gattgttcgt cgttgatgac aggcggtgtt tcatccacag ggatcagtaa
    15181 atccgcttgt tgcgcatcgg caagaatctc gctgaccagc ggctcgcctt ttgtcgtggg
    15241 cttatctgtt gccaccagca actggggggc cgctttgtcg gtagttgtct cgcctgctaa
    15301 tgcttcgctc aacaacgcga gaaaatcttg tgcagcatcg ctggctttgc cgccaggcaa
    15361 tgtggtggtg tcaacgtcgg cggtaattaa gggcgctaag cgaatcattc aggtttcctc
    15421 atggcggcgc gctgggcgaa ctcatccatc tttttctgat cgaggcggtt ttctgcaagc
    15481 agtgccgccg tggattgccg ttcctgcagt gtctgccagg cctgcaaacg ttgtttcttt
    15541 tctcgccagc tgttcagggc aatgtcaact ttctgcgtcc actgattaag ttgctggcga
    15601 tgctgagtaa tggctttttc cagcgtctgg ataaactgct gatagttgat ccagcggttg
    15661 ctggtcatcc cggcactcat atcgctgttg aggttattgc gatattcatt ctgataatcg
    15721 atcagcattt tgagctgttc ttccgcctgc tgacacccgc gacgcatttc acccagcagg
    15781 cgcgcggcat cctctacctc tttttctgcc agatctttca gggtcgccag cgcgccatgt
    15841 tctgccatct gccgttatct cctgggttat gacactgtcg ggaaaatacg ctccagcccc
    15901 tggagagacg cttcccagtc cgcgcgttca aaaatgcctt gttgcaaata gccctccagc
    15961 tgcggccaca gggcgatggc tttgtcgagc atcggatcac tgcctttggc atacgcgccg
    16021 acgctaacca gatcgcggtt acgctgaaaa ctcgacaaca gctgtttgaa ggtgcgcact
    16081 cgcgcgtaat gttgctcact gatcaacgcc gtcattgcgc ggctgatcga cgcttcaata
    16141 tcgatagccg gatagtgccc ggcttccgcc agtcggcgag acagcacaat gtgaccgtcg
    16201 aggattgccc gcgcggagtc ggcaatgggg tcctgctggt catcgccctc ggtgagcacg
    16261 gtataaaacg cggtaatcga gccgccgccg ctaatgccat ttccggcacg ctcgaccagt
    16321 gccggtaatt tggcaaacac cgacggggga taacctttag tggcgggtgg ttcgccaatc
    16381 gccagcgcaa tttcacgctg ggccatcgcg tagcgggtga gggagtccat aatcagcaac
    16441 acatgctgac cacgatcgcg aaaatcttcg gcaatgcgcg tggcataggc ggcaccctgc
    16501 attcgcagga gaggagaaac atccgccgga gcggcaatca ctactgagcg tgcacgccct
    16561 tcagcaccga ggatattctc aataaaatct tttacttcac gcccacgttc accaatcaaa
    16621 cccacgacaa tgacatcggc gcgggtgtaa cgggccatca tccccagcag cacactttta
    16681 ccaacgccag atccggcaaa cagccccata cgctgcccgc gcccaacggt aagcagggca
    16741 ttgattgggc gcacgccggt gtccagcaca tgttcaatcg gtgtacgttg caacgggtta
    16801 aatggcgggg taatcagcgc accggtttcc gtcgtatcgg gggaggggag gccatcgagc
    16861 ggtttaccgc tgccgtccag aacacgacct aataacgccg gaccgagcgg taaatgcttg
    16921 ccgctttgca gcccttctgc cgaaatgttt ttggcataaa cacgcgcgcc gggcaggaca
    16981 ccttcgactt cctccagcgg cattaaaaac agccgttgac cgttaaagcc aacgacttcg
    17041 ctttctactt cgtgcgtttc gctgccgttc tggcgctcaa tgacacaggt tgcgccgagc
    17101 ggcaattgta atccggtggc ttccagcacc agcccggtag cgcgagttaa tcgcccatag
    17161 cgacgtaccg caggcaactg cgccattttg gcttcaaagt tatccagcgt ggttagccag
    17221 cgagtcaggc gcgtggtcat tacaccactc ctggtgctgc cagacggcag agttcttgcc
    17281 agcgagtggc gacactggcg tcgagatcgc cttcatcggc ggagactttg caaccgccag
    17341 gatggagtgt gggatcgccc cgcaaccgcc agccatgcaa acttaaggta gcgccgagca
    17401 tatcatccac acgttgcaga tcatccgggt gcacgcgcag ctgtggttta ccgctgaata
    17461 acggttcttg ctgcaacaac tgttggatct gtttgatcag tgccgagtta tccactgttg
    17521 gcgtctgacc gatcacctga cgtgccgcct ccagcgccat ctgcatcagg cgcgaagcaa
    17581 tcacactatc aagcgcatca agggtagttt gaaattcgct gaccagttgc tgcatccggg
    17641 catgaattgg cgcttgttga gacttcgcct ctgccagacc ttgctccagc ccccgggcca
    17701 gtccttcctg atagccctgc tcatgacctt gctggcgacc ttcggcaatc cccgcctgat
    17761 aaccttgctc atgggcctgc atttgcagtt gcgccagttg ctgctcaagg ctgggttcgg
    17821 cctcttcaat gatggtttct tccggctcga ccatgggcac aaactctgcc tgtggtggcg
    17881 cgagatcgtc cggcgtccag gttttccacg gcagattatc agacataggt atcctcgccg
    17941 ctgccaatta ccatctcgcc agtttcggca aggcggcgca caatcagcag aatcgctttc
    18001 tgttcgtttt ccacctgcga cagacgcact ggaccacggt tggcgagatc gtcgcgcaga
    18061 atatcggcgg cacgctgcga catattgcgc aggaatttct cgcgcagtgg ctgctcggcc
    18121 cctttcagcg cgatcaacag cgattcggaa tccacttcct gcaacagacg ctgaatgctg
    18181 cgatcgtcga catccaccag attttcgaac aggaacatct cgtcgataat tttttgcgcc
    18241 agctcgccgt cgaattcgcg cacggcggta ataacggctt cttcctgctg agttttcatc
    18301 aggttgataa tttcggctgc cgttctcacg ccgcccattt tgctgcgctt gagattctga
    18361 ccgtcgagca agccattcag tacttcggtc agttccgcca gcgcggctgg ctgcacgccg
    18421 ccaaaggtgg cgatacgcaa catcacgtcg tggcgcagac gttcatcgaa caacgccaga
    18481 atatcggcgg cctgcgcgcg cttcagatgc accagaatgg tggcgataat ttgcggatgc
    18541 tcatcgcgaa tcagatcggc ggcactctgc ggctccataa agttgagcgt ttcaataccg
    18601 ctggcggtat cgcgagtttc gagaatatct tccagcaggc tggcggcacg ttcctcaccc
    18661 agagctttga ccaataccga acgcagataa tcgttggcgt tgatattcag tgcggcaaac
    18721 tgttcagctt cttgctcaaa ctccgccagc acatcggtta gctgcttgtt ggagatctgc
    18781 gtgacgttcg ccattgcagc gctcagggtt tgcacttcgc gctgggagag gtgcttgaac
    18841 acctctgccg cccggtcttc gccaatggtc atcagcagga tgacgctttt atcggtgcct
    18901 gtcaggttac tcatgatcgt tatttatcca ctggcgaatg accagcgcca ccacgcgcgg
    18961 atcgttatca gacatttcac ggatacgctg gctcatgact tctgccccca gacgttggtt
    19021 agcgcgtcgt tgttggagtt gttcgtcttt gctcaggcgg acttccaccg catcttccac
    19081 ttcctcacgg gcctgcgcct gttgctgtac agctttcatc gcctcggcgc gacgtgttaa
    19141 ctgcgggcgt accgctttcc gccacagcag ccacgccacc agcagtacca gcaaccagcg
    19201 accggcagcc agcaactgat cgataaacgc ttgctgttgc cagaacggca gttctccgcc
    19261 gctttcgtca ctgctattga acggcgagtt aacgacattg agcgagtcac cgcgtttttc
    19321 agaaaagccc atcgcctcgc gggtcagatc ttcaatttgc ttcatctttt cgttgctgag
    19381 aggcaatggt ttaccgtctg gcaaggtttt gtaattcacc actaccgcga ctgacagacg
    19441 ttgcacatcg cccacgttca ttttggtatg acgaatggtg cgatcgactt cgtagttact
    19501 ggtttcattc cgctgtgtgc tacgcggccc gctattgctg gtggtgctcg cctgctgctg
    19561 gcggttattt tgatttgccg gaggcgtgct gattggcgcg ttattcgcag gtgccggttg
    19621 attcgacaac gcccccggta cgccgcccgg ataaccggaa ccgctttgct cgctctcatt
    19681 aagctggcgt gaacgaagcg ccgcatgaga ttcatcaccg ttagggcgat actgttcttc
    19741 cgtttgttct ttactggcga agtccagttg cgccgtgacc tgggcgtgaa tattaccgtt
    19801 accaacaatt ggcgacagga tcgcttcaat acgccgctga atccggcctt cgacatcgct
    19861 ggcatatttc aactgagcgt cattaagatc gcgcccgctg gtattggact gggttaacag
    19921 atgtccaccc tgatccacca gcgtgacgtt ccccggcggc agaccagcaa ccgcgctgga
    19981 aaccagatgt acaatggcgc taatttgccc ttcatcgagt gtgcggccgg gtaacagatt
    20041 taccgtcacc gatgcagaag gggatttttg ttcacggacg aataaagacg gtttcggcat
    20101 tgccagatgt acgcgcgccc cttttaccgg gccgatagtt tcgatggtac gagaaagctc
    20161 gccttccagc gcccgctgat aattcacctg ttcgctgaac tggctgatac caaacttttc
    20221 ctgatcgagt agttcgaaac cgaccgcgcc gcctttgggc aaaccttgtt gcgccaggcg
    20281 cagacgcagc tcgtgaactt tatctgccgg aacttcaata gcgccgctgg cttcgctgaa
    20341 gcggtaagga atattcattt gcgtcagttg gctgacaatt gcgccaccat cctgatcgga
    20401 aagattgctg aataatgtgc ggtagtcggg ggctttcgcc cacaggatca gtgcgaccat
    20461 gaccgccact gccgcggaac cggcaacaat caatggaatt ttcggattcg cacgcaggcg
    20521 attaagccac tcaagagatt ttgtctgggc tgcagtcgca ttcatcgcgc acctcgtggc
    20581 tgattatgga cggcgttatt ggcaaagtgg aacaagactc actcccgggt cagcaaactc
    20641 gaaaaattga cgctgccatt atttgtgctt tcgttttttt ctatccgcca ataaacccgt
    20701 ttttttgttg ctatttagcg cctttgtctt attgacttac tggtaggctt tgctaccaga
    20761 aattatccag gagacgaaaa tgtcagcgat acaggggatt gaaggggtta tcagcctgtt
    20821 acaggctacg gcgatgagtg cgcgtgcgca ggattcactg ccgcaaccga ccattagttt
    20881 tgccgggcag ctgcacgccg cgctcgatcg cattagcgat acacaaacag ctgcccgcac
    20941 gcaggcagaa aaattcaccc tcggtgaacc cggcgtggcg ttaaacgatg tgatgaccga
    21001 tatgcaaaaa gcctcagttt ctatgcaaat ggggattcag gtgcgtaata agctggtggc
    21061 ggcgtatcag gaagtgatgt ccatgcaggt gtaggttttg taacctgttg ttaattacat
    21121 cccatctgcc cgcgtggggc atggatgggg caaactcact taatttctgg tttaaaatgg
    21181 atacctgatc ctgaaagttt tctgccatcc acgatccgta aacgcgataa tatgttttgt
    21241 cttcgctttg ctcataggaa gagtgaactc ttttgttagc ctggggttcc ttctgatcat
    21301 tattgttcct gcctttatct cttgccacgc cagagccccc tggatacaca tacaccagga
    21361 tgaaaacggt gagttgtgtt caaactgtag tacaattctc tccagtatga acaggaaaga
    21421 atatgctatg aacccttata tttatcttgg tggcgcaata cttgcagagg tcattggtac
    21481 aaccttaatg aagttttcag aggggtttac acggttatgg ccctctgttg gcacaattat
    21541 ttgctattgt gcatcatttt ggttattagc tcagacactg gcttatatac ctacagggat
    21601 tgcttatgct atctggtcag gagtcggtat cgttctgatt agtttgcttt cctggggatt
    21661 ttttggccaa cgactggacc tgccagccat cataggcatg atgttgattt gtgccggtgt
    21721 gttagtcatt aacttgttgt cacgaagcgc accgcattaa aaaataatca tccttgagat
    21781 aacaggaatc tgatttgtgc atattatggc taatgttcgg ggcaacttta taattatgat
    21841 tgcatttgcg cgatcattgc gcctttttgc ataatgagat caatgcacat caaataaaat
    21901 aacgataggt cacaacaaag aggtttttat gaaaaaactt atcgtttcaa gtgtattggc
    21961 attcataaca ttttctgcgc aggccgcagc atttcaggtc actagtaatg aaataaaaac
    22021 aggagagcaa cttacaacgt ctcatgtatt ttctggattt gggtgtgagg ggggtaatac
    22081 atcgccctca ttaacctggt ctggtgctcc agaaggcacc aaaagctttg ccgtaactgt
    22141 gtatgatcca gatgcgccta caggcagcgg atggtggcac tggactgttg ctaatattcc
    22201 agcaacggta acatatttgc ccgctgatgc aggaagacgt gatggtacaa aacttccgac
    22261 tggtgctgtc caaggccgaa atgattttgg ctatgcggga tttggtggag catgtcctcc
    22321 caaaggagat aaaccccatc attaccagtt taaaatatgg gctctaaaaa ctgataagat
    22381 tcctgtggat tctaattcca gcggagcgtt agttggttat atgcttaatg ccaataaaat
    22441 tgcaaccgct gagataatac ccgtttatga ggtaaagtag gataagagta tgctggcaaa
    22501 agataggact aacctaaaga ttgaagaaat acggatgcat aaacatcatg agattcacag
    22561 ggttaagcct cttatgccag ctttatgtcg tatccgtcag ggaaaaaaag ttatcaattg
    22621 ggagacgcat agtctaactg ttgataataa tcagataata ttatttccct gtggatatga
    22681 attttatatt gcgaattacc cagaagcagg tctttatctt gcagaaatgc tttattatcc
    22741 cattgatcta attgaaaagt tccaaaatct ttatgcgata accgatcaaa ttcgtaacac
    22801 gacaggtttc tgcttacctc agaatcccga gttaatatat tgttgggagc aactaaaaac
    22861 atctatttcc cgaggcttct caacgcaaat tcaggaacac ttagcaatgg gcgttctact
    22921 ttcattagga gcacatcatg ttaattgttt acttttatca gatagtaaac aatcattaat
    22981 aagtcgttgt tataacctaa tgctatccga acctggaaca aaatggacag caaacaaggt
    23041 agcgagatat ctctacattt ctgtttccac attgcatcgc cgtctggcaa gcgagggagt
    23101 aagttttcaa agtatattgg acgacgtgag gttaaataat gcgttgtctg ctatacaaac
    23161 gacagtaaaa cccatcagcg agattgccag ggaaaatggt tacaagtgtc cttctcgttt
    23221 tactgaaagg ttccataatc gttttaagat aacaccaaga gagctaagaa aagcgtccag
    23281 agagtaaaag tattttatga aggagcaaca gcatcgattt ttattttgga aaataaatac
    23341 ggcatactca acctattgga gcctgaacaa tccggtgact tctgcgctaa tcggggacgt
    23401 ttataagcac atataattga tactatcgtc ctccatcaca atttcagaaa tgcacgtgtg
    23461 atttttttgc atccggcgtt tggactatgt ggagttcaag agtgggaaag ttacaagagg
    23521 ttgaggggat aattaaaggg atgcttatga cattagatat ccggataggt acggatatcg
    23581 tt
//
LOCUS       DAPGWB010000070        22343 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.070, whole genome shotgun sequence.
ACCESSION   DAPGWB010000070 DAPGWB010000000
VERSION     DAPGWB010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22343
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.070"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(562..1653)
                     /gene="ychF"
                     /locus_tag="RHX79_002566"
     CDS             complement(562..1653)
                     /gene="ychF"
                     /locus_tag="RHX79_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDV2197721.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV
                     PMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH
                     VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
                     ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPY
                     LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKL
                     LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQ
                     GAKEAGKMRAEGKDYIVKDGDVMNFLFNV"
     gene            complement(1770..2354)
                     /gene="pth"
                     /locus_tag="RHX79_002567"
     CDS             complement(1770..2354)
                     /gene="pth"
                     /locus_tag="RHX79_002567"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDV2197722.1"
                     /translation="MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAK
                     FFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGV
                     AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQK
                     LIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ"
     gene            2632..2910
                     /gene="ychH"
                     /locus_tag="RHX79_002568"
     CDS             2632..2910
                     /gene="ychH"
                     /locus_tag="RHX79_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress-induced protein YchH"
                     /protein_id="HDV2197723.1"
                     /translation="MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAH
                     GAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS"
     gene            complement(2965..4644)
                     /gene="dauA"
                     /locus_tag="RHX79_002569"
     CDS             complement(2965..4644)
                     /gene="dauA"
                     /locus_tag="RHX79_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HDV2197724.1"
                     /translation="MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAI
                     PLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGL
                     AGLLVATLLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
                     AHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCA
                     VMGIVNLLGGHVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIR
                     TLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATA
                     AIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSE
                     AHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAP
                     VVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAF
                     QRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL"
     gene            complement(4769..5716)
                     /gene="prs"
                     /locus_tag="RHX79_002570"
     CDS             complement(4769..5716)
                     /gene="prs"
                     /locus_tag="RHX79_002570"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HDV2197725.1"
                     /translation="MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQI
                     NENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN
                     LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL
                     VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP
                     LSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH"
     gene            complement(5867..6718)
                     /gene="ispE"
                     /locus_tag="RHX79_002571"
     CDS             complement(5867..6718)
                     /gene="ispE"
                     /locus_tag="RHX79_002571"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDV2197726.1"
                     /translation="MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIE
                     LRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGG
                     GLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL
                     TPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKR
                     FREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLS
                     PLHRAML"
     gene            complement(6718..7341)
                     /gene="lolB"
                     /locus_tag="RHX79_002572"
     CDS             complement(6718..7341)
                     /gene="lolB"
                     /locus_tag="RHX79_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HDV2197727.1"
                     /translation="MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQ
                     DVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN
                     VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEI
                     TYSQNGKNWKVVYGGYDTKTQPAMPANMELTDGGQRIKLKMDNWIVK"
     gene            7555..8811
                     /gene="hemA"
                     /locus_tag="RHX79_002573"
     CDS             7555..8811
                     /gene="hemA"
                     /locus_tag="RHX79_002573"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041689438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDV2197728.1"
                     /translation="MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGG
                     VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMR
                     VASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGA
                     SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER
                     AQILADEVGAEVIALSEIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLL
                     VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMA
                     WLRAQSASETIREYRSQAEHVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAP
                     TKSLQQAARDGDNERLNILRDSLGLE"
     gene            8853..9935
                     /gene="prfA"
                     /locus_tag="RHX79_002574"
     CDS             8853..9935
                     /gene="prfA"
                     /locus_tag="RHX79_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDV2197729.1"
                     /translation="MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQ
                     LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLP
                     KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK
                     EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN
                     PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA
                     RIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME
                     GKLDMLIEPIIQEHQADQLAALSEQE"
     gene            9935..10768
                     /gene="prmC"
                     /locus_tag="RHX79_002575"
     CDS             9935..10768
                     /gene="prmC"
                     /locus_tag="RHX79_002575"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDV2197730.1"
                     /translation="MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGE
                     TQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQA
                     LARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKN
                     IHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIV
                     HIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY
                     Q"
     gene            10765..11157
                     /locus_tag="RHX79_002576"
     CDS             10765..11157
                     /locus_tag="RHX79_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB family protein"
                     /protein_id="HDV2197731.1"
                     /translation="MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIV
                     PPVVDTVLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQ
                     ARIIAFPLALVVLYIIIKLATTKVPLLG"
     gene            11161..11970
                     /locus_tag="RHX79_002577"
     CDS             11161..11970
                     /locus_tag="RHX79_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing protein"
                     /protein_id="HDV2197732.1"
                     /translation="MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSL
                     AKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLG
                     AVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI
                     SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEI
                     RDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH"
     gene            12006..12860
                     /gene="kdsA"
                     /locus_tag="RHX79_002578"
     CDS             12006..12860
                     /gene="kdsA"
                     /locus_tag="RHX79_002578"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDV2197733.1"
                     /translation="MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTV
                     TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQA
                     QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGN
                     EKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRR
                     AQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG
                     FEELDTSK"
     gene            complement(13009..13116)
                     /locus_tag="RHX79_002579"
     CDS             complement(13009..13116)
                     /locus_tag="RHX79_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HDV2197734.1"
                     /translation="MTLAQFAMTFWHDLAAPILAGIITAAIVSWWRNRK"
     gene            complement(13521..14621)
                     /gene="chaA"
                     /locus_tag="RHX79_002580"
     CDS             complement(13521..14621)
                     /gene="chaA"
                     /locus_tag="RHX79_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-potassium/proton antiporter ChaA"
                     /protein_id="HDV2197735.1"
                     /translation="MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINL
                     LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL
                     MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA
                     LPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAH
                     SSVWHAIWLIIHLIAVIAVTKMNASPLETLLDSMNAPVAFTGFLVALLILSPEGLGAL
                     KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLV
                     LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA"
     gene            14891..15121
                     /gene="chaB"
                     /locus_tag="RHX79_002581"
     CDS             14891..15121
                     /gene="chaB"
                     /locus_tag="RHX79_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative cation transport regulator ChaB"
                     /protein_id="HDV2197736.1"
                     /translation="MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKDDRRD
                     DASREETAHKVAWAAVKHEYAKGDDDKWHKKS"
     gene            15279..15974
                     /gene="chaC"
                     /locus_tag="RHX79_002582"
     CDS             15279..15974
                     /gene="chaC"
                     /locus_tag="RHX79_002582"
                     /EC_number="4.3.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415736.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-specific
                     gamma-glutamylcyclotransferase"
                     /protein_id="HDV2197737.1"
                     /translation="MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDE
                     GPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGG
                     RTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVFIMDPRHP
                     EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLA
                     ENYPDGVLRPGFA"
     gene            complement(16018..16371)
                     /gene="ychN"
                     /locus_tag="RHX79_002583"
     CDS             complement(16018..16371)
                     /gene="ychN"
                     /locus_tag="RHX79_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/F sulfur relay family protein YchN"
                     /protein_id="HDV2197738.1"
                     /translation="MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD
                     AVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLV
                     ELAQWTLSADKVLTF"
     gene            16556..17950
                     /gene="ychO"
                     /locus_tag="RHX79_002584"
     CDS             16556..17950
                     /gene="ychO"
                     /locus_tag="RHX79_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415738.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter invasin YchO"
                     /protein_id="HDV2197739.1"
                     /translation="MSRFVPRIIPFYLLLLVAGGTANAQSTFEQKAANPFDNNNDGLP
                     DLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHV
                     ESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDCYLTWSQLGLTQQDDGLVSNV
                     GVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQT
                     ATQEQRMARGYDLTARMRMPFYQHLNTSVSVEQYFGDRVDLFNSGTGYHNPVALSLGL
                     NYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRY
                     DNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQ
                     ILSLTPGAQANSAEGWTLIMPDWQNGERASNHWRLSVVVEDNQGQRVSSNEITLTLVE
                     PFDALSNDELRWEP"
     gene            complement(17951..18601)
                     /gene="narL"
                     /locus_tag="RHX79_002585"
     CDS             complement(17951..18601)
                     /gene="narL"
                     /locus_tag="RHX79_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator NarL"
                     /protein_id="HDV2197740.1"
                     /translation="MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQG
                     IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRG
                     ADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRE
                     RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF"
     gene            complement(18594..20390)
                     /gene="narX"
                     /locus_tag="RHX79_002586"
     CDS             complement(18594..20390)
                     /gene="narX"
                     /locus_tag="RHX79_002586"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /protein_id="HDV2197741.1"
                     /translation="MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSA
                     HAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGL
                     QDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMA
                     VFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN
                     MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ
                     NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL
                     ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA
                     TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT
                     TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS
                     NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD
                     CRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE"
     gene            20729..22120
                     /gene="narK"
                     /locus_tag="RHX79_002587"
     CDS             20729..22120
                     /gene="narK"
                     /locus_tag="RHX79_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate transporter NarK"
                     /protein_id="HDV2197742.1"
                     /translation="MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPC
                     LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGR
                     RWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPK
                     QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWI
                     WVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAG
                     FAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGL
                     LFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSD
                     ERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV
                     VITWAVYGRHSKK"
BASE COUNT         5515 a         5549 c         5763 g         5516 t
ORIGIN      
        1 agcggttaaa aaatttggtg aagatttttt gtaataatcc taattagtta tgggaatttc
       61 gcttgatgta tctgcataac aaaaacaata tgcgccattt ttgcattact aataagaaaa
      121 agcaaaaaac atcgatattc atttttggtc aatgggtttt ctggcctatc gttgttattg
      181 tgctactggt tatcattttc atcttgccag gatcgcacgt aatcacgtta ttcggggact
      241 ttatctgcgg gatattaccc ttcaggtaag tccttttctc gccagcatat tggagcgtga
      301 tcaatattga tcagctgtga agggggtgat gtgtagtgga ccaaaactta cgttatatca
      361 ctactaatga gatatccgtc atctgacact gatgtcttta attattctcg tggttcactg
      421 taggcaataa gcacaaaagt gtaggatgtt acaagaatga ttaggactcg gtgaaatgaa
      481 aaatccacgc aattgcgtgg attatatata cttttgcgct cttcatgaga tttagcgaaa
      541 cctcatgaga caacaaatta attagacgtt gaaaaggaag ttcatcacat cgccatcttt
      601 aacgatgtaa tctttacctt ctgcacgcat tttgcctgct tctttcgcgc cttgttcacc
      661 tttgtaagtg atgaaatctt caaacgagat ggtttgtgca cggataaagc ctttttcaaa
      721 atcagtatgg attttgcccg ctgcctgcgg cgcggttgct ccaaccggaa tggtccatgc
      781 acgcacttct ttcaccccag cggtgaagta agtttgcagg ttcagcagct tataaccggc
      841 acggatcaca cggttcaggc ccggctcttc cagcccaagc tcctgcataa actcgtcacg
      901 ttcttcgtcg tccagttcgg caatgtctgc ttcaacagca gcacaaaccg gaaccacaac
      961 agaaccttct ttcgccgcga tttcacgcac ctggtcaaga tatgggttgt tttcaaaacc
     1021 gtcttcgttg acgttggcga tgtacattgt tggtttcagc gtcaggaagc tcaggtaacg
     1081 aatagccgct ttctcttcag cgcttaaatc cagcgcgcgc agcatacctg cattttccaa
     1141 ctggggcagg catttttcca ggaccgccag ctcagctttc gcgtctttat cgccaccttt
     1201 ggctttcttc tgtacgcgat gaatcgcacg ttcgcaggtg tcgaggtctg ccagcgccag
     1261 ttcggtgttg ataacttcaa tatcgtcagc cgggttaact ttgccggaaa cgtgaatgat
     1321 gttgtcattt tcaaagcagc gaacaacgtg accgatcgct tcggtttcac ggatgttggt
     1381 caggaactgg ttacccagac cttcgccttt cgatgcgcct tttaccagac cggcgatatc
     1441 gacaaattcc atggtcgtgg gaagcgtacg ttgcggtttt acgatttcag ccagttgatc
     1501 caggcgaggg tcaggcattg gtacgacgcc tgtgttcggc tcaatggtgc agaatggaaa
     1561 gttggccgct tcaataccgg ctttggtcag cgcgttgaac agggtagatt tcccgacgtt
     1621 gggcaaaccg acgataccgc atttgaatcc catgatttaa atcaccttaa tatcttaata
     1681 atcaacctgt tattgctaac agattgcaga aatggaaata actttgccta ttatacacgg
     1741 cactcggcaa aaatgccgca gacaacgact tattgcgctt taaaggcgtg caatcggttc
     1801 gttgctttgg tcaagccatc tgtaaaccac atttcagtac aacgcgccgc ttcgtcgatg
     1861 gcttcatcaa ttaacttctg ttcactaaca ggcggtttgc ctaacacaaa accgacaact
     1921 ttatttttat cgcccggatg accgattccg atgcgtaaac ggtgaaagtt agggttatta
     1981 cccaatttac tgatgatgtc tttcagtcca ttgtgaccac catggccacc gcccaattta
     2041 aatttggcga cgccaggagg cagatccagt tcgtcgtggg ccaccagaat ttcgtccgga
     2101 ttaatgcgga aaaaactggc catcgccgca acggctttgc cgctgagatt cataaatgta
     2161 gtcgggacta acaggcggac atcttcgcct ccaagagtga ctcgcgaagt ataaccaaag
     2221 aatttagcct cttcgcgcag cggagcgcgc aaacgctctg ccagtaagtc aacgaaccag
     2281 gcaccagcat tatgtcgcgt tgcggcgtat tcagcaccgg ggttcgccag gccgacaatc
     2341 aatttaatcg tcacgttttt ttgtcctgag tgtgtacata actggcgcgt agtttactgg
     2401 ttgcggcccc gcttgacaaa aaactgcgta tcaaatgcag ataacgtaat aattgcatga
     2461 gtggactatt agaaagtcaa ggtgttcagg cgtttatttg taaagttttg ttgaaataag
     2521 ggttgtaatt gtgatcacgc ccgcacataa cccacagggt gttgtctata ctttacacat
     2581 aaggaagagg ggtattccct gttacaaccc agaaagttcc ggaggtgaca tatgaaacgc
     2641 aaaaacgctt cgttactcgg taacgtgctc atggggttgg gtctggtggt aatggtggtc
     2701 ggcgtggggt attcaatcct caaccagtta ccacagttta atatgcccca gtatttcgca
     2761 catggtgcag tgctaagtat tttcgtcggt gccattctct ggctggcggg tgcccgtgtt
     2821 ggcgggcatg aacaggtgtg cgaccgttac tggtgggttc gccactatga caaacgttgc
     2881 cgccgtagcg ataatcgccg tcatagctaa caaataatgc agtttgctga ccagtcagtt
     2941 tgcgctgact ggtcaatctc gtacttataa atccgccatc gccgcgcgac gattcgggaa
     3001 gaacgccagg cgtcccggga tcggttgaat gccagcgcga gccatagtgc gcagtggctg
     3061 gaattccacg ttgcacacgc gcagttcaca tccctcgggc agacgcttca caaaacgctg
     3121 gaacgcatca agaccaccag catcaagtac cggaaccgca tcccacttca gaatcacaat
     3181 ccgtttgcct tcaagacgtg actccaggtc cgtgaacaag ccttcagcag cagcaaaaaa
     3241 cagcgggcca ataacgcgca gaaccaggac atcgtctgga acatctacga ctaccggtgc
     3301 caggcgagtc atacgtgcga tacgacgcat aaacagcagc gatgccagca cgatccccac
     3361 gctgatggca ataaccatat caaacagcac ggtcagcgac atgcacagca gcatgacaat
     3421 gatgtcatct ttcggcgcat gacgcagcaa gtcgaccact ttgtgcgctt cactcatgtt
     3481 ccacgccacc atcaacagca gggcagccat ggcggaaagc ggcagccagg agagcagcgg
     3541 tgccagtacc agcagggcaa gaataaccag aatagagtgg atcaccgccg agatagggga
     3601 agttgccccg gcacggacgt tagcggcaga acgcgcgatg gcagctgtag cggtaatgcc
     3661 accaaagaac ggagcgatga tattccccag tccctgtcca accagttcgc tattcgcctt
     3721 gtgtttcgtc ccggtcatac catccagcac cacggcgcag agcagagatt cgattgcgcc
     3781 gagcattgcc attgagaatg ccgcaggcag cagtgtgcga atagaatccc aggttagcgt
     3841 gaattctgaa ttaggcagat cccacggcag caccagttgc ggcagcagtt gcggaatacc
     3901 gttaccctga gaaccatcgg ccaggacgta gtggaattgc gaaccgatgg tagcaacatg
     3961 tccgccgagc aggttaacaa tccccatcac cgcgcaacca gccagcaagg ccggaaggtg
     4021 accgggtaaa cgaatgccca gacgcggcca aaaaacaaga atacctagcg tcacaatgcc
     4081 aatggcagca tcacccacat taatggtcgg cagcgccata aataatgcgc cgactttttg
     4141 tagataatgt tccgggacat gggccatttg cagaccgaga aaatctttaa tctgcatggt
     4201 accgatggtg atcccgatac ccgaggtgaa acctaaggtg acggaaaccg gaatatactc
     4261 aatcaggcga ccaaagcgtg ccagacccat cagaatcaaa aagatccccg acagcaaggt
     4321 cgcaaccagc agtcctgcca gtccaaactg ttgcgacacg ggatagagaa ttaccacaaa
     4381 tgccgcagtc ggaccggaaa cgctaaagcg tgacccaccc gtcagagcaa tgacaatccc
     4441 cgcaacagct gcggtatata aaccgtactg gggtgccaca ccactaccaa tagccaacgc
     4501 catcgccagc gggatagcaa taatcccgac ggttatcccg gcaatcaggt cacgggtaaa
     4561 ccgtgcggca gtatattttt ctttccagca agcgtcgatc agagcgcgga aaggcatcac
     4621 atgtgaggaa aatattttgt tcacaataat gtttcatccg tgagcgcatc atctgtcaac
     4681 taaatggcag gtgaaggagg cataggtcat acaaatggat attacagaca aaaaaacccg
     4741 ccgcagcggg tctttgagcc gggttcgatt agtgttcgaa catggcagag atcgattctt
     4801 cgttgctgat acgacgaatc gcttcggcca gcatacctga cagggtcaga gtacgcacgt
     4861 tcggcagtga tttgatttca tcgctcagcg gaatggtatc gcagacaacg acttcatcaa
     4921 ttacagagtt acgcaggttg ttcgccgcgt tgccagagaa gatcgggtga gtcgcgtacg
     4981 caaatacacg tttagcacca cgttctttca gagcttcagc agctttacac agcgtaccgc
     5041 cagtgtcgat catatcatcg accagtacgc agtcacgacc tgcaacgtca ccgatgatat
     5101 gcatcacctg ggaaacgttc gcacgcggac gacgtttgtc gatgattgcc atatcggtat
     5161 cgttcagcag cttagcgata gcgcgggcac gcacaacgcc gccgatgtcc ggagaaacca
     5221 caattgggtt atccagattc agctgcagca tgtcttccag caggatcggg ctaccaaata
     5281 cgttatcaac cggaacgtcg aagaaaccct gaatctgttc agcgtgcaga tccactgtca
     5341 gcacacggtc aacaccgacg ctggagagga agtctgcaac cactttcgca gtgattggta
     5401 cacgagcgga acggacgcga cggtcctggc gcgcatagcc aaagtagggg ataacagcgg
     5461 tgatacgacc tgcggaagca cgacgcaggg catcaaccat aacgactaat tccatcaggt
     5521 tgtcgttagt aggggcacaa gtggactgga tgatgaaaat atcaccaccg cgtacatttt
     5581 cattaatttg tacgctgact tcgccatcgc taaagcgacc tacagcggcg tcgccgagtg
     5641 aagtgtacag gcggttggca atacgttgtg ctagttccgg ggtggcgtta ccagcaaaaa
     5701 gcttcatatc aggcacgaga agaacctcag gcatgcgtcc attggtggaa agaatctgcc
     5761 gaaaactgtg cgggccaggc atgatccttt ccaggcggtg tattaaagag cgcgatgcaa
     5821 cgtctggaac aaggtgacgt tgtcaccgaa actcagcttg cccggcttaa agcatggctc
     5881 tgtgcaatgg ggaaagatta acgcctttcg ccacaaagcc attgagccat tccggggctt
     5941 gctctagcac ctggcgggct tcagactctg tatcaaattc agcaaagaca caggcccctg
     6001 tcccagtcag gcgcgacggg gcgtattcta acagccagga aagcaccgca tcaacctcgc
     6061 gaaaacgttt tcttgcgata acctcgcaat cattgctgaa ttcacatttt agcaacgttt
     6121 ctattgacct ttttggcgta ttgcgcggga gttcaggatc tttaaaaatc accggagtcg
     6181 gaatacttac accagggtgc gccaccagat accacttctc tggcggatcc accggcgtta
     6241 gtatttcacc aacgccttcg gcaaacgcgg catgcccccg aacaaagaca ggaacatctg
     6301 cgcccagcgt cagccccatt tccgccagct catccatgct tagcccgcat tgccagagat
     6361 gatttaatgc caccaggacc gtcgcggcat tggatgaacc accgccgaga ccgccgccca
     6421 tcggcaaacg cttgtcaatg ctgatattcg caccgcttcc cgtcggaaga cgcccgctgt
     6481 ctgccgcagt tttcatcaac aaccgcgctg cgcgaacgat caggttatct tcatgttcca
     6541 cgccttcaac gggcgttaac agacgaatat ccccatcgtc acgaagctca atgctgatgg
     6601 tgtcgccgta atcaagaaac tgaaacagcg tttgcagcgt gtggtaacca tccgcacgct
     6661 gaccggtaat gtataaaaac agattaagtt ttgccggaga gggccactgt gtccgcatta
     6721 tttcactatc cagttatcca tttttaactt gatgcgttga ccaccgtcgg tgagttccat
     6781 attggctggc atcgcaggtt gcgttttggt gtcataacca ccataaacaa ccttccagtt
     6841 tttgccattc tggctgtagg taatttcgct caggcggtac tggtcgtcca gtttgtagtc
     6901 ggttgcatca cccggtaaac ctaaaatcca ctggcgcaag ctgttgagcg gaattggcat
     6961 tccggtcaat ttgccaatca tctcttcggc gtcatcggcg gtataacgct gacctttatt
     7021 gtcgactaac tgcacgttac ccggttgagc attcagctcc agttccgtgc tgcccaatgg
     7081 gttagtgagc agcagacggt agcgatcctg gccggtttgc tgccagaaaa agcgggcgta
     7141 cactttttgt tggtcagaaa tataagcgaa cgcgccgcga gtctgatact gattaagatt
     7201 gcgcacgtct tgctgatgct gacgccattg tggcgaatcc gggcttttgc caggaccttt
     7261 gggcgtggta acggaacagg cagtgagcac aagagcagcc agcggtagca ggcggataag
     7321 acgaaaatcg ggcaggggca tagtgatgac aagtccttga gatacgttgc agttataacc
     7381 cttaatgcta gcgttaccgt ccgctatcgt ctatgttcaa gttgtcttaa ttgccagaat
     7441 ctaacggctt tcggcaatta ctccaaaagg gggcgctctc ttttattgat cttacgcatc
     7501 ctgtatgatg caagcagact aaccctatca acgttggtat tatttcccgc agacatgacc
     7561 cttttagcac tcggtatcaa ccataaaacg gcacctgtat cgctgcgaga acgtgtatcg
     7621 ttttcgccgg ataagctcga tcaggcgctt gacagcctgc ttgcgcagcc gatggtgcag
     7681 ggcggcgtgg tgctgtcgac gtgcaaccgc acggaacttt atcttagcgt tgaagagcag
     7741 gataacctgc aagaggcgtt aatccgctgg ctttgcgatt atcacaatct taatgaagaa
     7801 gatctgcgta aaagcctcta ctggcatcag gataacgacg cggttagcca tttaatgcgt
     7861 gttgccagcg gcctggattc actggttctt ggggagccgc agatcctcgg tcaggttaaa
     7921 aaagcgtttg ccgattcgca aaaaggtcat atgaaggcca gcgaactgga acgcatgttc
     7981 cagaaatctt tctctgtagc gaaacgcgtt cgcactgaaa cagatatcgg tgccagtgct
     8041 gtgtctgtcg cttttgcggc ttgtacgctg gcgcggcaga tctttgaatc gctctctacg
     8101 gtcacagtgt tgctggtagg cgcgggcgaa accatcgagc tggtagcgcg tcatctgcgc
     8161 gaacataaag tacagaagat gattatcgcc aaccgcactc gcgaacgtgc ccaaattctg
     8221 gcagatgaag ttggcgcgga agtgattgcc ctgagtgaga tcgacgaacg tctgcgcgaa
     8281 gccgatatca tcatcagttc caccgccagc ccgttaccga ttatcgggaa aggcatggtg
     8341 gagcgcgcat taaaaagccg tcgcaaccaa ccaatgctgt tggtggatat tgccgttccg
     8401 cgcgatgttg agccggaagt tggcaaactg gcgaatgctt atctttatag tgtggacgat
     8461 ctgcaaagca tcatttcgca caacctggcg cagcgtaaag ccgcagcggt tgaggcggaa
     8521 actattgtcg ctcaggaaac cagcgaattt atggcgtggc tgcgagcaca aagcgccagc
     8581 gaaaccattc gcgagtatcg cagccaggca gagcacgttc gcgatgagtt aaccgccaaa
     8641 gcgttagcgg cccttgagca gggcggcgac gcgcaagcca ttatgcagga tctggcatgg
     8701 aaactgacta accgcttgat ccatgcgcca acgaaatcac ttcaacaggc cgcccgtgac
     8761 ggggataacg aacgcctgaa tattctgcgc gacagcctcg ggctggagta gcagtacatc
     8821 attttctttt tttacagggt gcatttacgc ctatgaagcc ttctatcgtt gccaaactgg
     8881 aagccctgca tgaacgccat gaagaagttc aggcgttgct gggtgacgcg caaactatcg
     8941 ccgaccagga acgttttcgc gcattatcac gcgaatatgc gcagttaagt gatgtttcgc
     9001 gctgttttac cgactggcaa caggttcagg aagatatcga aaccgcacag atgatgctcg
     9061 atgatcctga aatgcgtgag atggcgcagg atgaactgcg cgaagctaaa gaaaaaagcg
     9121 agcaactgga acagcaatta caggttctgt tactgccaaa agatcctgat gacgaacgta
     9181 acgccttcct cgaagtccga gccggaaccg gcggcgacga agcggcgctg ttcgcaggcg
     9241 atctgttccg tatgtacagc cgttacgccg aagcccgccg ctggcgggta gaaatcatga
     9301 gcgccagcga gggtgaacat ggtggttata aagagatcat cgccaaaatt agcggtgatg
     9361 gtgtgtatgg tcgtctgaaa tttgaatctg gcggtcatcg cgtgcagcgt gttcctgcta
     9421 cggaatcgca gggtcgtatt catacttctg cttgtaccgt tgcggtaatg ccagaactgc
     9481 ctgacgcaga actgccggac atcaacccag cagatttacg cattgatact ttccgctcgt
     9541 caggggcggg tggtcagcac gttaacacca ccgattcggc aattcgtatt actcacttgc
     9601 cgaccgggat tgttgttgaa tgtcaggatg aacgttcaca acataaaaac aaagcgaagg
     9661 cgctttcagt gctcggtgct cgcatccacg ctgctgaaat ggcaaaacgc caacaggccg
     9721 aagcgtctac ccgtcgtaac ctgctgggga gtggcgatcg cagcgaccgt aaccgtactt
     9781 acaatttccc gcaggggcgc gttaccgatc accgcatcaa cctgacgctc taccgcctgg
     9841 atgaagtgat ggaaggtaag ctggatatgc tgattgaacc gattatccag gaacatcagg
     9901 ccgaccaact ggcggcgttg tccgagcagg aataatggaa tatcaacact ggttacgtga
     9961 agcaataagc caacttcagg cgagcgaaag cccgcggcgt gatgctgaaa tcctgctgga
    10021 gcatgttacc ggcagagggc gtacttttat tctcgccttt ggtgaaacgc agctgactga
    10081 cgaacaatgt cagcaacttg atgcgctact gacacgtcgt cgcgatggtg aacccattgc
    10141 tcatttaacc ggggtgcgag aattctggtc gttgccgtta tttgtttcgc cagcgacctt
    10201 aattccgcgc ccggatacgg agtgtctggt ggagcaggca ctggcgcggt tgcctgaaca
    10261 accttgccgt attcttgatc tcgggacggg taccggggcg attgcgcttg cgctggctag
    10321 cgagcgcccg gactgcgaaa ttatcgctgt agatcgtatg cctgatgctg tctccctggc
    10381 acaacgtaat gcccagcatc tggcgatcaa aaatatccac attctgcaaa gcgactggtt
    10441 tagcgcgcta gccgggcagc agtttgcgat gattgtcagc aatccgccgt atattgacga
    10501 gcaggaccca catcttcaac aaggcgatgt ccgctttgag ccgctcactg cgctggttgc
    10561 ggcagacagt ggaatggcag acatcgtgca tatcatcgaa cagtcgcgta acgcgctggt
    10621 atccggcggc tttctgcttc tggaacatgg ctggcagcag ggcgaagcgg tgcgacaagc
    10681 atttatcctc gcggggtatc atgacgtcga aacctgccgt gactatggtg ataacgagcg
    10741 cgtaacgctc ggccgctatt atcaatgaca agtttttcta cactgcttag tgttcatctt
    10801 attagtatcg cgctttctgt tgggctatta accttacgtt tctggctacg ttatcagaag
    10861 catccacagg catttgctcg ctggacgcgc attgtgccgc cggttgtcga tacggtgtta
    10921 ttgttaagcg gcattgcgtt gatggctaaa gcgcacatcc tgccattttc cgggcaggca
    10981 cagtggctga ctgaaaagct gtttggagtt atcatttata tcgttttggg ttttattgca
    11041 ctcgattatc gtcgtatgca cagtcagcag gcgcgcatta ttgccttccc gctggcgttg
    11101 gtggtgctgt acatcatcat taaactcgcc accacaaaag taccgttact ggggtaagtc
    11161 atgagatcgt tagctgattt cgaatttaat aaagcgccat tgtgcgaagg catgatcctg
    11221 gcttgcgaag caatccgccg cgattttccc tcgcaagatg tttacgacga actggagcgt
    11281 ctcgttagtc tggcgaagga agaaatcagc cagcttctgc ctttagaaga gcagctggaa
    11341 aaactgatcg cgctgtttta cggcgactgg ggatttaaag cctcacgcgg cgtttatcgt
    11401 ctttccgatg cattatggct ggaccaggtg ttaaagaatc gacagggcag tgcggtatca
    11461 ttaggtgcgg ttttattatg ggtcgcgaat cgtctcgatt tgccgctgct gccggtgatt
    11521 ttccctacgc agctgatatt gcgcattgaa tgtccggatg gcgaaatttg gctgattaat
    11581 ccttttaacg gtgaatcgtt aagcgaacat atgctggacg tatggttaaa gggaaatatc
    11641 agcccgtcgg cggaactgtt ttatgaagac cttgatgaag ctgataacat tgaggtaatc
    11701 cgcaaattgc tggatacact caaagcctcg ttgatggaag aaaatcagat ggagctggcg
    11761 ttacgcacca gcgaagcttt attacaattc aaccctgaag atccctatga aattcgcgat
    11821 cgcgggttga tttatgcgca actggattgc gaacacgttg cgttgaacga tttaagttat
    11881 ttcgttgaac agtgtccgga agacccgatc agcgaaatga tccgtgcgca aataaataac
    11941 atcgcgcata aacatattgt gctgcattaa ttaatcgaca ttttactcaa gattaaggcg
    12001 atcctatgaa acaaaaagtg gttagcattg gcgacatcaa cgtagcaaat gacctgccgt
    12061 tcgtactgtt tggcggtatg aacgtgctgg aatctcgcga tctggcgatg cgcatttgcg
    12121 agcactacgt aactgtgacc cagaaactgg gtatccctta cgtgttcaaa gcctcttttg
    12181 acaaagccaa ccgctcctcc atccactctt atcgtggacc gggcctggaa gaagggatga
    12241 aaatcttcca ggagttgaag cagacttttg gcgtgaaaat tatcaccgac gttcacgaac
    12301 caagtcaggc acagcccgtt gctgatgtcg tggatgtgat tcagttgccg gcgtttcttg
    12361 ctcgccagac tgacctggtt gaagccatgg cgaaaaccgg tgcggtaatt aacgtcaaga
    12421 aaccacagtt tgtcagcccg ggacagatgg gtaatatcgt tgataaattc aaagaaggcg
    12481 gcaacgaaaa agtgattctt tgcgatcgtg gtgctaactt cggctatgac aacctggttg
    12541 tcgatatgct gggcttcagc attatgaaga aagtgtctgg taactcgccg gtgattttcg
    12601 acgtgaccca cgcactgcaa tgccgcgatc cgtttggcgc agcttccggt ggtcgtcgtg
    12661 ctcaggtggc tgagctggca cgagccggta tggcggtagg tctggcgggg ctgtttattg
    12721 aagcgcatcc ggatccggaa catgcgaaat gtgatggtcc atccgcgctg ccgctggcta
    12781 aactggaacc gttcctcaag cagatgaaag cgattgatga tctggtgaaa ggtttcgaag
    12841 aactggatac cagcaagtaa tcttttttgc ttgaaaaata aagtcttagc gttctgcgtt
    12901 aagacttttt tcatgggtgc cagatacaaa aaaggccgca ggctgttacc cctgcggccg
    12961 gtttcgggcg catattgcca tcacggcagc ctgacgcccg ttttcacctt acttccggtt
    13021 acgccaccag ctgacaatcg ctgcggtaat aatccccgcc aggatcggtg ctgccaggtc
    13081 gtgccagaaa gtcatggcaa actgcgcgag cgtcatatag ccgccttgtt gtaatgacaa
    13141 cattttgcgg ctattcttga agtgtctggt ttcaagatta gcccccgttt tgttgtcagg
    13201 ttttacctct caacgtgcgg gggttttctc tttccagcaa ccaatgccac cagggataaa
    13261 gcccccgcaa cattgcgcct caccggataa ttccggcttg gtgtggatac tacgtctcaa
    13321 ttcatcttca cttcatccct gaaatgtttg caataaagag tacattccgg cttttcaaca
    13381 gctgttgcag tggtttcgtg caggttgtgg tacaggctcg caattctgat taacgagctg
    13441 tccaggtagt atgaagaaat acaataagca ggaatttatc ttatctcccc cgatttccgt
    13501 catcggagga gatataactg tcaggcaaat atcgtcatca aataggcggc aaacagtgcc
    13561 agatgcgctg cgccattgag cacgttagta cgtccggtgg agaaggagat atggcacagc
    13621 actaaagagg ccaccatcac caccatttct ggcgcaccaa gtgcaaactg taattcgtta
    13681 cccgtcataa aggcaattag cgtgacgaca ggtacggtaa gcgaaatggt tgctaacact
    13741 gaaccaaaga acagattcat cgcgcgctgg acctggttgt tcaacactgc ttttaacgca
    13801 cctaaacctt ccggcgacag aatcaacaga gccaccagga agccagtaaa ggcgacaggg
    13861 gcattcatgc tgtcgagcaa tgtctccagc gggctggcat tcattttggt gactgcaata
    13921 acggcaatca gatggataat caaccagata gcatgccaca cgctgctatg ggcagacggt
    13981 ttaccgtgat gcgggtcatc gtcatcactg tcatcttcgt gctcgtagac aaacaaactt
    14041 tgatgcgttt tggtctggat cagcaaaaat acgccataca ttgccgcaga aattaatgct
    14101 accagtaacg cctgaccggt tgaaaaattc gccgcaggca gagccattgg aaataccagt
    14161 acgattatcg ccagggggaa cagcgcaatt aaatactgct tgataccaaa cagattcata
    14221 tattgggtgg caaacttacg accgcccaac aataatgaaa agccaaccag cccaccggta
    14281 acaatcataa tgattgaata gagcgtatca cgcattagcg ttggcgcggc gtcgccggtt
    14341 gccattaaag ctgaaatcaa actgacttca agaataacca ctgaaaggct aagaataagc
    14401 gaaccgtaag gttctcccag gcgatgggct aatacgtccg catgacggac aacactaaag
    14461 gcgctactta aaataccaat aagcgcaaga agattgatgg caatgaccac tggtagtgtc
    14521 tggctgcttc cccacaggaa cagcactacc agcgccagaa ccgggaaaat aagcgaagtc
    14581 tccttgtggc gggtttttac cgcctcttga gcatttgaca ttatggttat ccctttgcag
    14641 atgaatttat cgaaaatgta aaaaataggt aggaaaaata acagaaagtg tctggatatc
    14701 ggtaacattt tacgaatttt taccccactg tcgatttttt actcattggg acataaaaat
    14761 aagtattacg tttagacaat gtttgtttta gcgtttctta agaacagtct gacatgaaaa
    14821 ttcttatgtt ttggcaagag tagatattgt tgaccacact taatgttcaa ctttgtaaaa
    14881 ggagtcaacg atgccgtata aaacgaaaag cgatctgccg gaaagcgtaa agcacgttct
    14941 accgtctcat gcccaggata tctataaaga agcgttcaac agcgcatggg atcaatataa
    15001 agataaagac gatcggcgtg atgacgccag tcgcgaagaa accgcgcata aagtggcctg
    15061 ggctgctgtg aagcatgaat atgccaaagg ggatgatgat aaatggcata aaaaatcgta
    15121 aaaccggtag cttagttaaa gctattcgtg cggtgttgcc ttgcaagtgg tccgtggatt
    15181 gcatattgtc ccgttagtgg tttcaaaatg agcagtaaaa atgtccggaa gacaccaaaa
    15241 agttgtcgca gggaagtatg cagtggcgga ggtgtaaggt gataacgcgt gatttcttga
    15301 tgaatgccga ttgtaaaacg gcatttggtg ccattgaaga atcactctta tggtcagcag
    15361 agcaacgggc ggcttcgctg gcggcgacgc tggcttgtcg acctgatgag ggaccggtgt
    15421 ggatcttcgg ttatggatcg ttgatgtgga atccggcact ggagtttacc gagtcgtgca
    15481 ccggtacact ggttggatgg catcgcgcgt tttgcctgcg cctgaccgcc gggcgcggga
    15541 ctgcgcacca gccgggacgg atgcttgcac tgaaagaggg cggacgcact acaggcgtcg
    15601 cctatcgact gccagaagag acgctggagc aggaactaac cctgttgtgg aagcgcgaga
    15661 tgattaccgg ctgttatctg ccaacctggt gtcagcttga tcttgatgat ggatgcacag
    15721 taaacgccat tgtgtttatt atggacccgc gacatccaga atatgaatct gacactcgcg
    15781 ctcaggtcat cgcgccgttg attgcggcgg cgagcggtcc gctgggaacc aacgcacaat
    15841 acctgttttc actggaacag gagcttatca aactgggaat gcaggacgat gggctgaatg
    15901 atttgctggt atcggtaaaa aaactgctgg cggagaatta tccggatggt gtgttacggc
    15961 cgggattcgc ctgagtaaac ttccctcata gtggggcgtc agacgccccc tcaaacatta
    16021 aaatgtgagc actttatcgg ctgacagcgt ccattgcgcc agttccacaa gagtaccgat
    16081 ttccacccca tcaataagag gaagtgtgct aatcccgcgc ccgtcggtac aggttttgca
    16141 caatttcacc ggtacattct gagcggtaag gatctccagc atttgctgaa tgttgtagcc
    16201 ttcccctggt ttttgcccgc gcaacccggc tgtgaccgca tcagacatca ggaacagacg
    16261 cagatccaga ttgctctcct gctctcgtaa cgcaatggcc agccgcaagc tgttaaacaa
    16321 ggattcgctc ccgtaaggtg cgccattggc aacgatcacg attttttgca ttatttactc
    16381 ctgtattcag ggaattagac attcatcttc tatcttactg cttctgcagc gtctgaccaa
    16441 tcggtcacat ttttaaggat tttcctgaaa gcgcgagaaa atacgacaaa agttgccagt
    16501 aatcgttatt ctttaaggct atggtttttc attattaccg gaagttaccg acgttttgag
    16561 ccgtttcgtt cctcgcatta tcccgtttta tttactcttg cttgtagcag gcggtacagc
    16621 taacgcacaa tctaccttcg agcaaaaagc ggcaaatccc tttgataata acaatgatgg
    16681 tctgccggat ttaggcatgg ctcccgaaaa tcatgatggg gaaaaacact ttgctgaaat
    16741 tgtgaaagat ttcggcgaaa ccagtatgaa tgataacggg ctggatactg gcgagcaggc
    16801 aaaagctttc gcattgggaa aagtccgcga cgcgcttagt caacaggtta atcagcacgt
    16861 agagtcctgg ctatcaccgt ggggaaatgc cagtgttgac gtcaaagtgg ataacgaagg
    16921 acatttcacc ggcagtcgtg gaagctggtt tgtgccgtta caagataatg attgttatct
    16981 cacctggagc cagcttggtc ttactcagca ggatgatggg ttggtgagca atgtgggcgt
    17041 tgggcaacgc tgggcgcgcg gcaactggct ggtgggttat aacacttttt atgacaactt
    17101 gctggacgaa aatcttcagc gagcgggctt tggtgccgaa gcgtggggcg aatatttgcg
    17161 actatcggca aacttttatc agccgtttgc tgcatggcat gaacagacag ccacgcagga
    17221 acaacggatg gcgcgcgggt atgacctgac agcccggatg cgcatgccgt tctatcaaca
    17281 cctcaatacc agtgtcagcg tagaacagta ttttggtgat cgtgttgatt tgtttaactc
    17341 tggtacgggt tatcacaatc ccgtcgcgtt gagtctggga ttaaattaca cccctgtgcc
    17401 attagtcact gtgacggccc agcataaaca gggtgaaagt ggcgagaatc aaaataacct
    17461 cgggctgaat cttaattacc gctttggtgt accgctcaaa aaacaacttt ctgcgggtga
    17521 ggttgccgaa agtcagtcgt tacgtggtag tcgctatgac aatccgcagc gaaataatct
    17581 accgactctt gagtaccgac agcgaaaaac gttaacggtg tttctggcga caccgccgtg
    17641 ggatctaaaa cctggcgaaa cagtgccgct gaaattacaa atccgcagtc gttacggtat
    17701 tcggcaactg atttggcagg gcgatacgca gatattaagt ttgacgccgg gcgcacaagc
    17761 caacagcgcg gagggctgga cgctgatcat gcctgactgg cagaacgggg aaagggcgag
    17821 caatcactgg cgattgtctg tggtggtgga agataaccag gggcagcgtg tctcctccaa
    17881 tgagatcacg ctaacgcttg tcgaaccgtt cgatgcattg tcaaacgacg aactgcgctg
    17941 ggaaccgtaa tcagaaaatg cgctcctgat gcacccatac cgctgcttcc acgcgagact
    18001 tgagcttcat tttcttcagc atgtgcttga cgtgcacttt tactgtgctt tcggtgatgt
    18061 ccaggcggcg ggcaatcatc ttgttcggca aaccctgggc aatcagcttg agaatatcgc
    18121 gctcgcgtgg ggttaactgg ttaacatcgc gctcagtagt ggcacggtta gcacgcaagc
    18181 tggcggccag aacaggcgtt aatgcttcgc ttaataccat ttcgccagca gctgcctgat
    18241 gcaatgcttt cagcagatct tccggttcca tatcttttaa cagatagcca tccgcgccgc
    18301 gtttcagtgc ggtgaccaca tcttcttcat ggttagagac gctgaatacc acaatgcgcc
    18361 ctgagaggga cttttcgcgc agtttatcca gcgtttccag accgttcatg ccgggcatat
    18421 tgagatctaa caggattaga tcgggatcaa gagactccgc cagttcaata ccctgttcgc
    18481 cattactcgc ttcgccaacc acggtgatat ctggtgccat actgataagc tgttttacgc
    18541 cagttcgcag catcgggtga tcgtcaatca gcaggatagt agccggttcc tgattactca
    18601 tgggtatctc cttggacgtc tgtgaaagtt ttttcgggaa taaaggtgac caccacttcg
    18661 gtgccacctg attcacgacg gcggacgcgg caatcgcctc gtaaactttg cgcacggtcg
    18721 cgcattatta tcatgccgta gtgattgctg cggatggcat tttcaggcac gccgcagccg
    18781 ttatcctgta cggtcagttt gacctgatta tcgttttgcg ccaccgtcac cacgacctca
    18841 ctcgcttgcg aatgtttgag ggcgttactt aatgcctcac gggcaatttg caacaagtgg
    18901 attgcctgat gcgaaggcac cagacgaggc ggcaattgat aatccagctt caccgggaag
    18961 ccaaatttgg cgctgtactc ttcgcaactc gcctccagcg ccggacgtaa tccaggctcg
    19021 gtgagctgca agcggaatgt ggtgagcaat tcacgcaact gcgcccagga tgcattcagt
    19081 tcgttacgga tctgacttaa cagttcgcgg ctgctttctg gcagcgcatc gccctgcatc
    19141 tgtaaacaac tcacctgcat cttcatacaa gagagagatt gggcaataga atcatgcagt
    19201 tcgcgcgcaa tggtggcacg ctcttccatc acgatcaact gttgctgacg ttcctgatgg
    19261 cgatccaacg ccagcgtggc ggtgagttgt tcaaccaggg tatccaccag ttgttgttga
    19321 tcatggctaa gatgacgccc ctgcggcagg gtcgccagca aaataccgta ctgcgtatga
    19381 gagtcagcca gccgccactt cagggttgtg ccgcgatcgc caacgggtaa tacgccgcgc
    19441 gggcagagct ggcagccttt atcatcacaa gtcatatctg gctggcaggt aaactcctga
    19501 tgattctctt catcatcagt atcataaacc cgcagttcga tatcacgtag cagggttaaa
    19561 ttctgtaagc cgttgagtac cggtgacagg cgttcacaca gcggggcgcg ggaatgcaaa
    19621 cggcggttag cctgccataa aaatgagagg atctgatttt tatgctccag cccggcggtt
    19681 ttctcctgaa cccgctgctc aagtacggca taactttcgg ccagttctgc agacatattg
    19741 ttcaacgcag ttccaagcat cgccatttcg ttgcgcccgc tgatgtttgc gcgttgggta
    19801 aaatcgcgat ggctgacggc actcgccatt gccagcagtt gccgccacgg ttgtagcagt
    19861 cgcgcccgca accagataat agtgaacacc agtaaaagtg ccataaatac cgccattacc
    19921 cgatggacca gtaccactgt ctcgatgcgc atttccgtgg tgcggtcaaa accagatacc
    19981 agctgatcaa gcccggcaac aaactggctg acatccgctg acaccgtttc tcggttttgt
    20041 gcacgcatca gcgcagggat cagttcatta cgccagtaat cttgtaaacc ctgtaattgc
    20101 gccagttgtc cgtctcgttc tgctgctcga gtcaactcgg cgctaaatgc cgtttgttcc
    20161 atctctttaa ttaagggctt gtctttctcg cttaatggca ctgccgccaa cagacggtaa
    20221 ctttgcatgc gcagcgatcc cgctttgttg atcgcatggg cgctgccctg aacgccttgc
    20281 accagccagc cagaaaccgc catccctgcc agtccaatag cagtagaaag caacacaata
    20341 agcgcaacct gattaaccag ggtgagcgga gagagacaac gtttaagcat gtaaacctct
    20401 tccttcaggc tttaaatgag caataacctt aatgaatgtg acgatgcatt ctggaatggc
    20461 agtattctcg gctattggct gaagtatacc catacccgga aagagttact ccttatttgc
    20521 cgtgtggtta gtcgctttac atcggtaagg gtagggattt tacagcaccg tgaaaaatct
    20581 cataattttt atgaaatcac tgtactcact atgggtaatg ataaatatca atgatagata
    20641 aagttatctt atcgtttgat ttacatcaaa ttgcctttag ctacagacac taaggtggca
    20701 gacatcgaaa cgagtatcag aggtgtctat gagtcactca tccgcccccg aaagggctac
    20761 tggagctgtc attacagatt ggcgaccgga agatcctgcg ttctggcaac aacgcggtca
    20821 acgtattgcc agccgtaacc tgtggatttc cgttccctgt ctgctgctgg cgttttgcgt
    20881 atggatgttg ttcagcgctg ttgcggtgaa cttaccgaaa gtcggtttta attttacgac
    20941 cgatcagcta tttatgttga ctgcgctgcc ttcggtttct ggcgcgttat tacgtgttcc
    21001 atactccttt atggttccta tcttcggtgg tcgtcgctgg acggcgttca gcaccggtat
    21061 tctgattatt ccttgcgtct ggctgggttt tgccgtgcag gatacctcca cgccttatag
    21121 cgtcttcatc atcatctctc tgctatgcgg ctttgctggc gcgaacttcg catccagtat
    21181 ggcaaacatc agcttcttct ttccgaaaca gaagcagggt ggcgcgctgg gtctgaatgg
    21241 tggtctggga aacatgggcg tcagcgtcat gcagttggtt gctccgctgg tggtatcact
    21301 gtcgattttc gcagtatttg gtagccaggg cgtcaaacag ccggatggga ctgagctgta
    21361 tctggcgaat gcgtcctgga tatgggtgcc gttccttgcc atcttcacca ttgcggcgtg
    21421 gtttggcatg aacgatcttg ctacctcgaa agcctccatc aaggagcagt tgccggtact
    21481 caaacggggt catctgtgga ttatgagcct gctgtatctg gcaaccttcg gctcctttat
    21541 cggcttctcc gcgggctttg cgatgctgtc aaaaacgcag ttcccggatg ttcagattct
    21601 gcaatacgct ttcttcgggc cgtttattgg tgcgctggcg cgttctgcag gtggtgcatt
    21661 atctgaccgt ctgggcggaa ctcgtgtcac gctggtgaac tttattctga tggcgatttt
    21721 cagcggcctg ctgttcctga ccttaccgac tgacgggcag ggcggaagct tcatggcgtt
    21781 cttcgcggtc ttcctggcgc tgttcctgac agctgggctg ggtagtggtt ccactttcca
    21841 gatgatttca gtgatcttcc gtaaactgac aatggatcgc gtgaaagcag aagggggttc
    21901 tgacgaacgt gcgatgcgtg aagcggcaac cgacacggca gcggcgctgg gtttcatctc
    21961 tgcgattggc gctattggtg gcttctttat cccgaaagcg tttggtagct cgctggcatt
    22021 aacgggttcg ccagtcggcg caatgaaggt atttttgatt ttctatatcg cctgcgtagt
    22081 gattacctgg gcggtatatg gtcggcattc taaaaaataa accgttactc gtcatacttc
    22141 gggttacatg tgctgcggct gcgttcattc accccagtca cttactttag taagctcctg
    22201 ggattcattc acttgccgcc ttcctgtaaa ccgaattata tagagtaaaa tatttgatta
    22261 tcctttgcgc ggcatgatgt cgcgcttttt ttatgcgtta tttagttaca acatactaat
    22321 gttatatggc ttatttcgcc gga
//
LOCUS       DAPGWB010000071        22065 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.071, whole genome shotgun sequence.
ACCESSION   DAPGWB010000071 DAPGWB010000000
VERSION     DAPGWB010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22065
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.071"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(144..2411)
                     /gene="adiA"
                     /locus_tag="RHX79_002588"
     CDS             complement(144..2411)
                     /gene="adiA"
                     /locus_tag="RHX79_002588"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418541.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HDV2197743.1"
                     /translation="MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDG
                     FAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMD
                     RDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP
                     GHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVF
                     GADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSR
                     NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQ
                     DLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS
                     QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEV
                     IDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQD
                     CWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRH
                     GIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPD
                     TYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPMAEITPREAYNAIVDNNVELVSI
                     ENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHETEG
                     TEIIDGIYHVMCVKA"
     gene            complement(2610..3518)
                     /gene="melR"
                     /locus_tag="RHX79_002589"
     CDS             complement(2610..3518)
                     /gene="melR"
                     /locus_tag="RHX79_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MelR"
                     /protein_id="HDV2197744.1"
                     /translation="MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWH
                     GQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL
                     FLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM
                     LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK
                     LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS
                     TFGKYVGMSPQQYRKLSQQRRQTFPG"
     gene            3801..5156
                     /gene="melA"
                     /locus_tag="RHX79_002590"
     CDS             3801..5156
                     /gene="melA"
                     /locus_tag="RHX79_002590"
                     /EC_number="3.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HDV2197745.1"
                     /translation="MMTAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPT
                     RLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFVVVAFQIGGYEPCTVTDFEVC
                     KRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAM
                     YARYPHIKQVGLCHSVQGTAEELARDLNIDPATLRYRCAGINHMAFYLELERKTADGS
                     YVNLYPELLAAYEAGQAPKPNIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWF
                     IKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKNASRIDIKPSREYASTIMNA
                     IWTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTN
                     INVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLH
                     R"
     gene            5259..6680
                     /gene="melB"
                     /locus_tag="RHX79_002591"
     CDS             5259..6680
                     /gene="melB"
                     /locus_tag="RHX79_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418544.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose:sodium transporter MelB"
                     /protein_id="HDV2197746.1"
                     /translation="MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV
                     GTLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEG
                     TTQIVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTA
                     GVTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHL
                     TLKAIVALIYKNDQLSCLLGMALAYNVASNIITGFAIYYFSYVIGDADLFPYYLSYAG
                     AANLVTLVFFPRLVKSLSRRILWAGASILPVLSCGVLLLMALMSYHNVVLIVIAGILL
                     NVGTALFWVLQVIMVADTVDYGEYKLHVRCESIAYSVQTMVVKGGSAFAAFFIAVVLG
                     MIGYVPNVEQSTQALLGMQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDK
                     YRKVPPEPVHADIPVGAVSDVKA"
     gene            complement(6819..7448)
                     /locus_tag="RHX79_002592"
     CDS             complement(6819..7448)
                     /locus_tag="RHX79_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HDV2197747.1"
                     /translation="MTRTLKPLILNTGALALTLILIYTGISAHDKLTWLMEVTPVIIV
                     VPLLLATARRYPLTPLLYTLIFFHAIILMVGGQYTYAKVPVGFEVQEWLGLSRNPYDK
                     LGHFFQGLVPALVAREILVRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQ
                     GADDFLGTQGDQWDTQSDMFCALLGALTTVIFLARFHCRQLRRFGLITG"
     gene            complement(7571..9217)
                     /gene="fumB"
                     /locus_tag="RHX79_002593"
     CDS             complement(7571..9217)
                     /gene="fumB"
                     /locus_tag="RHX79_002593"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fumarate hydratase"
                     /protein_id="HDV2197748.1"
                     /translation="MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEP
                     EALTLLAQQAFHDASFMLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVL
                     PTCQDTGTAIIVGKKGQRVWTGGGDEEALSKGVYNTYIEDNLRYSQNAALDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAHYYDELPTEGNEHGQAFRDVQLEQEL
                     LEEAQKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIW
                     IEKLEHNPGQYIPQELRQAGEGEAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVG
                     RDIAHAKLKELIDAGKELPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDL
                     LQSHGGSMIMLAKGNRSQQVTDACHKHGGFYLGSIGGPAAVLAQQSIKHLECVAYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIVNKQCANCTK"
     gene            complement(9295..10635)
                     /gene="dcuB"
                     /locus_tag="RHX79_002594"
     CDS             complement(9295..10635)
                     /gene="dcuB"
                     /locus_tag="RHX79_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuB"
                     /protein_id="HDV2197749.1"
                     /translation="MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQP
                     GKPPVDVMLVIIAVVAASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTI
                     LCGTGHVVYTILPIIYDVAIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLG
                     NVTFDGRHLEFLDLLAITIPSTLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREY
                     VYGDTATLLDKKLPKSNWLAMWIFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMF
                     MLLTGALIIILTKTNPASISKNEVFRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLG
                     EMVKEYPWAYAIVLLLVSKFVNSQAAALAAIVPVALAIGVDPAYIVASAPACYGYYIL
                     PTYPSDLAAIQFDRSGTTHIGRFVINHSFILPGLIGVSVSCVFGWIFAAMYGFL"
     gene            complement(11206..11925)
                     /gene="dcuR"
                     /locus_tag="RHX79_002595"
     CDS             complement(11206..11925)
                     /gene="dcuR"
                     /locus_tag="RHX79_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DcuR"
                     /protein_id="HDV2197750.1"
                     /translation="MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIF
                     NSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVD
                     YLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLT
                     PQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTG
                     RPVYRYRIQAEHYSLLKQYCQ"
     gene            complement(11922..13553)
                     /gene="dcuS"
                     /locus_tag="RHX79_002596"
     CDS             complement(11922..13553)
                     /gene="dcuS"
                     /locus_tag="RHX79_002596"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DcuS"
                     /protein_id="HDV2197751.1"
                     /translation="MRHSLPYRMLRKRPMKLSTTVILMVSAVLFSVLLVVHLIYFSQI
                     SDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTD
                     MQSLRYSHPEAQRIGQPFKGDDILKALNGKENVAINRGFLAQALRVFTPIYDENHKQI
                     GVVAIGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEIS
                     TLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQV
                     VDVSEVLRDGTPRRDEEITIKDRLLLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRL
                     DGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYILKTANNYQEEIGSLLGKI
                     KSPVIAGFLISKINRATDLGHTLILNSESLLPDSGSEDQVATLITTLGNLIENALEAL
                     GPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSERGVGLALVK
                     QQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR"
     gene            13734..13964
                     /locus_tag="RHX79_002597"
     CDS             13734..13964
                     /locus_tag="RHX79_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4Fe-4S)-binding protein"
                     /protein_id="HDV2197752.1"
                     /translation="MDQALLDEGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLK
                     RKPWIMPDEVDVVTVVKVIDTCPSGALKYRHK"
     gene            13976..14248
                     /locus_tag="RHX79_002598"
     CDS             13976..14248
                     /locus_tag="RHX79_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDV2197753.1"
                     /translation="MEIREGHNKFYINDEQGKQIAEIVFVPTGENLAIIEHTDVDESL
                     KGQGIGKQLVAKVVEKMRREKRKIIPLCPFAKHEFDKTREYDDIRS"
     gene            14475..14771
                     /gene="ghoS"
                     /locus_tag="RHX79_002599"
     CDS             14475..14771
                     /gene="ghoS"
                     /locus_tag="RHX79_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HDV2197754.1"
                     /translation="MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEY
                     GIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK"
     gene            14799..14972
                     /gene="ghoT"
                     /locus_tag="RHX79_002600"
     CDS             14799..14972
                     /gene="ghoT"
                     /locus_tag="RHX79_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system toxin GhoT"
                     /protein_id="HDV2197755.1"
                     /translation="MALFSKILIFYVIGVNISFVIIWFISHEKTHIRLLSAFLVGITW
                     PMSLPVALLFSLF"
     gene            complement(15091..16608)
                     /gene="lysS"
                     /locus_tag="RHX79_002601"
     CDS             complement(15091..16608)
                     /gene="lysS"
                     /locus_tag="RHX79_002601"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDV2197756.1"
                     /translation="MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDH
                     TSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD
                     SLPEGVYNDQFKKWDLGDIIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGL
                     QDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGA
                     SARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT
                     MMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIK
                     KYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAHLIQPTFITE
                     YPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAG
                     DDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMRPQK"
     gene            complement(16845..18302)
                     /gene="dtpC"
                     /locus_tag="RHX79_002602"
     CDS             complement(16845..18302)
                     /gene="dtpC"
                     /locus_tag="RHX79_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpC"
                     /protein_id="HDV2197757.1"
                     /translation="MKTPSQPRAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDN
                     HAISLFSAYASLVYVTPILGGWLADRLLGNRTAVIAGALLMTLGHVVLGIDTNSTFSL
                     YLALAIIICGYGLFKSNISCLLGELYDENDHRRDGGFSLLYAAGNIGSIAAPIACGLA
                     AQWYGWHVGFALAGGGMFIGLLIFLSGHRHFQSTRSMDKKALTSVKFALPVWSWLVVM
                     LCLAPVFFTLLLENDWSGYLLAIVCLIAAQIIARMMIKFPEHRRALWQIVLLMFVGTL
                     FWVLAQQGGSTISLFIDRFVNRQAFNIEVPTALFQSVNAIAVMLAGVVLAWLASPESR
                     GNSTLRVWLKFAFGLLLMACGFMLLAFDARHAAAGGQASMAVMISGLALMGFAELFID
                     PVAIAQITRLKMSGVLTGIYMLATGAVANWLAGVVAQQTTESQISGMAIAAYQRFFSQ
                     MGEWTLACVAIIVVLAFATRFLFSTPTNMIQESND"
     gene            complement(18361..20508)
                     /gene="cadA"
                     /locus_tag="RHX79_002603"
     CDS             complement(18361..20508)
                     /gene="cadA"
                     /locus_tag="RHX79_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase CadA"
                     /protein_id="HDV2197758.1"
                     /translation="MNVIAILNHMGVYFKEEPIRELHRALERLNFQIVYPNDRDDLLK
                     LIENNARLCGVIFDWDKYNLELCEEISKMNENLPLYAFANTYSTLDVSLNDLRLQISF
                     FEYALGAAEDIANKIKQTTDEYINTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
                     SPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEQYIARVFNADRSYMVTN
                     GTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIP
                     QSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWV
                     PYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEA
                     YMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWF
                     FDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFG
                     IPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAFDLNLRV
                     KNMLPSLYREDPEFYENMRIQELAQNIHKLIVHHNLPDLMYRAFEVLPTMVMTPYAAF
                     QKELHGMTEEVYLDEMVGRINANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEI
                     GAHYPGFETDIHGAYRQADGRYTVKVLKEESKK"
     gene            complement(20588..21922)
                     /gene="cadB"
                     /locus_tag="RHX79_002604"
     CDS             complement(20588..21922)
                     /gene="cadB"
                     /locus_tag="RHX79_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cadaverine/lysine antiporter"
                     /protein_id="HDV2197759.1"
                     /translation="MSSAKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWI
                     ISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGI
                     TAVSYLSTFFPVLNDPVPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVM
                     TAIVGWHWFDAATYAANWNTADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKR
                     TVPLATMLGTGLAGIVYIAATQVLSGMYPSSVMAASGAPFAISASTILGNWAAPLVSA
                     FTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDSNGIPKKGLLLAAVKMTALM
                     ILITLMNSAGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGVNIRNFVSLICSVL
                     GCVFCFIALMGASSFELAGTFIVSLIILMFYARKMHERQSHSMDNHTASNAH"
BASE COUNT         5579 a         5293 c         5538 g         5655 t
ORIGIN      
        1 aaaaaaagcg cggggtgggg ccgcgcaaaa agtatgacat ttttgtttgc agcaattttt
       61 atgaaaacgt tgccatactc aaaaggccta aggccaggcg gcgtaatgtt atttaaacaa
      121 ttacgccttc agcggaatag tggttacgct ttcacgcaca taacgtggta aataccgtca
      181 ataatttcag tcccttcagt ttcgtgttca aatccaggga aatggtggtc ccaggattgc
      241 agcgagcgta aataacttac ttgcggactg tttttatcgc cgaagttttc accagacagc
      301 agcatcggga ttcctggcgg atacgggata actgagtttg ccgcgatgcg tcctggcaga
      361 ttttcaatgg ataccagttc gacattgttg tcgacaatcg cgttgtacgc ttcacgcggg
      421 gtgatttccg ccatcggcag gccggaatag gcttcgttca accgtgcgcc agggttgttt
      481 tctttcagcc aggcaaacat ggtgtcaccc agatcgtgaa tccccatgtt cgcgtaagtg
      541 tcaggatatt gttcaacaag ttccggcatc acctgcgcca gcggtgtgtt ggcgtcatag
      601 tggcgtttga aggagcaaag ggtgttaacc agagtccccc atttcccacg ggttacgccc
      661 atagagaaca ggaacataat ttggaagtca gtggtgcggg taggcacaat gccgtggcga
      721 ccaagccagg cagtgaccag cgccgccgga acaccggttt cttccagttc accatcttca
      781 cccattcccg gagcaaggat gctgacttta attgggtcga gcatactcca gttatccgga
      841 atatctttga agccgtgcca gctttcgccc ggatgcatta cccagcagtc ctgaacggtg
      901 gtcagcagtt tggttggtgc gtcagcaaag tcataggttt tgccggtttg tgggtcggtg
      961 acgacttctt tgttccacgg tttgaagaac cagctaccgt cagcggtgaa ctctttatat
     1021 agccgcgcca tcgcctgacg gaaatcaacc gcttcgtcga tcacttcctg cgtcagtgac
     1081 aggccgctgt tgccgtccat catcgacacc gccacgtcgt tggatgcgca gatggcatac
     1141 agcggggagg tggtggcatg catcatgtag gcctggttga agcgggagaa gttaatcgcc
     1201 ccacgacctt cacgtacatg aatataagaa gcctgtgaaa gcgcattcag cagtttgtgg
     1261 gtggagtggg tggcgaaaac ggtaggaccg ttgtgatcgc caggttcgcc gcgcatggca
     1321 tagtgatcgg catagatcgg gttgaaacgt gcatagccgt accaggcttc gtcaaagtgc
     1381 agacgatcgg aggttttttc cagcagatcc tgcgcttctt tagcgttata acacacgccg
     1441 tcataggtgc agttggtcac cacgcagtaa gacggttttt gcccggcttt gtctttggtc
     1501 agcgggcttt cactgatttt cttctgcaag gtttcaggtt gcatttcctg cggatagatt
     1561 ggcccgataa tgccgtagcg gttgcggctt ggcaccatat agaccggttt cgcgcctgtc
     1621 agcatcaaac cttgttcgat ggatttatgg cagttacggt caacgaccac gacatcgtta
     1681 tcggtcatgc aagcctgcat gatggtgcgg ttagagccgg aagtaccgac gactaccgac
     1741 caggagcgat cggcaccaaa tacgcgtgcg gcatattttt cgctttcgcc aaatgcgcca
     1801 gtatggtcaa gcaaagaacc gagggaagtt cgttcgatgc ccatgtcggt gcggaacaga
     1861 ttttcaccat agtagtcatg gtagaaacgt ccggcgggtg ttttggtaaa accaacgccg
     1921 ccctggtggc ctggcgctgc ccaggaatat tcatggatgt cactatattt catcagcgcg
     1981 ctgaacagtg gcggcaacag ctgctggcgg tagcgggtca tcgcggcaac ggcgcgtccg
     2041 gcgataaagt cggcggtatc ttccagaatc caggcgaatt catcgacaag ctccagcaga
     2101 tcccggtcca ttgcggcgag ggctttttcc cgatcgccca acaggaagac cggcacgttt
     2161 tgttggcgct catgaagctt accgatcaat tgtctgacgt tttgatgttc gtccggatgt
     2221 tccatttgat agctgaacat caggcagtca atggcttcgt ttgaagagag aatggcaaaa
     2281 ccatcatcaa aggaggtgga tttaatcacg gtaacatttt gctggcttaa agcatctgcc
     2341 agacgctcaa cggcgttacc gacccaggtg tcttgatgga gaaactcgct ttcaacaatt
     2401 aatactttca tcattgctta cccggttatg aaggaatctt cgttgcgggc aagtatcttc
     2461 cggccttttc gggctgtaaa gcgcgtgaaa aacaaacatt tttggaatat ttatttttat
     2521 aaacaatatg ttatgtgatt attttaattt attttcactg cttattatcg acggctaaac
     2581 tatttttttg gctgatactg atatcgtctt tagccgggaa acgtctggcg gcgctgttgg
     2641 ctaagtttgc ggtattgttg cggcgacatg ccgacatatt tgccgaacgt gctgtaaaaa
     2701 cgactacttg aacgaaagcc tgccgtcagg gcaatatcga gaatactttt atcggtatcg
     2761 ctcagtaacg cgcgaacgtg gttgatgcgc atcgcggtaa tgtactgttt catcgtcaat
     2821 tgcatgaccc gctggaatat ccccattgca tagttggcgt taagtttgac gtgctcagcc
     2881 acatcgttga tggtcagcgc ctgatcatag ttttcggcaa taaagcccag catctggcta
     2941 acataaaatt gcgcatggcg cgagacgctg tttttgtgtg tgcgcgaggt tttattgacc
     3001 agaatcggtt cccagccaga gaggctaaat cgcttgagca tcaggccaat ttcatcaatg
     3061 gcgagctggc gaatttgctc gttcggactg tttaattcct gctgccagcg gcgcacttca
     3121 aacgggctaa gttgctgtgt ggccagtgat ttgatcacca tgccgtgagt gacgtggtta
     3181 atcaggtctt tatccagcgg ccaggagaga aacagatgca tcggcagatt aaaaatcgcc
     3241 atgctctgac aggttccggt atctgttagt tggtgcggtg tacaggccca gaacagcgtg
     3301 atatgaccct gattgatatt cactttttca ttgttgatca ggtattccac atcgccatcg
     3361 aaaggcacat tcacttcgac ctgaccatgc cagtggctgg tgggcatgat atgcggtgcg
     3421 cgaaactcaa tctccatccg ctggtattcc gaatacagcg acagcgggct gcgggtctgt
     3481 ttttcgtcgc tgctgcacat aaacgtatct gtattcatgg atggctctct ttcctggaat
     3541 atcagaatta tggcaggagt gagggaggat gactgcgagt gggagcacgg ttttcaccct
     3601 cttcccagag aggcgagggg agcgtccgag catcatgagg ccgaaaactc tgcttttcag
     3661 gtaacttatt accataaact cagatttact gctgcttcac gcaggatctg agtttatggg
     3721 aatgctcaac ctggaagccg gaggttttct gcagattcgc ctgccatgat gaagttattc
     3781 aagcaagcca ggagatctgc atgatgactg cacccaaaat tacatttatc ggcgctggtt
     3841 cgacgatttt cgttaaaaat attcttggtg atgtgttcca tcgcgaggcg ctgaaaacgg
     3901 cgcatattgc cctgatggac attgatccca cccgcctgga agagtcgcat attgtggtgc
     3961 gtaagctgat ggattcagca ggggccagcg gcaaaatcac ctgccacacc caacagaaag
     4021 aagccttaga ggatgccgat tttgtcgtgg tggcatttca gattggcggt tatgaacctt
     4081 gcacggtgac tgatttcgag gtctgtaagc ggcatggtct ggaacaaacc attgccgata
     4141 cgttggggcc gggcggtatt atgcgcgcgc tacgtaccat tccgcatctg tggcaaattt
     4201 gcgaggacat gacggaagtc tgccccgatg ccaccatgct caactatgtt aacccaatgg
     4261 cgatgaatac ctgggcgatg tatgcccgct atccgcatat caaacaggtc gggctgtgcc
     4321 attcggtgca gggaacggcg gaagagctgg cgcgtgacct caatatcgac ccagctacgc
     4381 tgcgttaccg ttgcgcaggt atcaaccata tggcgtttta cctggagctg gagcgcaaaa
     4441 ccgccgacgg cagttatgtg aatctctacc cggaactgct ggcggcttat gaagcagggc
     4501 aggcaccgaa gccgaatatt catggcaata ctcgctgcca gaatattgtg cgctacgaaa
     4561 tgttcaaaaa gctgggctac ttcgtcacgg aatcgtcaga acattttgct gagtacacac
     4621 cgtggtttat taagccaggt cgtgaggatt tgattgagcg ttataaagta ccgctggatg
     4681 agtacccgaa acgctgcgtc gagcagctgg cgaactggca taaagagctg gaggagtata
     4741 aaaacgcctc ccggattgat attaaaccgt cacgggaata tgccagcaca atcatgaacg
     4801 ctatctggac tggcgagccg agtgtgattt acggcaacgt ccgtaacgat ggtttgattg
     4861 ataacctgcc acaaggatgt tgcgtggaag tagcctgtct ggttgatgct aatggcattc
     4921 agccgaccaa agtcggtacg ctaccttcgc atctggccgc cctgatgcaa accaacatca
     4981 acgtacagac gctgctgacc gaagctattc ttacggaaaa tcgcgaccgt gtttaccacg
     5041 ccgcgatgat ggacccgcat actgctgccg tgctgggcat tgatgaaata tatgctcttg
     5101 ttgacgacct gattgccgcc cacggcgact ggctgccagg ctggttgcac cgttaaaacg
     5161 cgactaaacg ctactgcgcc gggggattta ttccggcgca cacctctgac gataccaata
     5221 acagaaggcg ggcgttggta acagcgaccc gataccctat gagcatttca atgactacaa
     5281 aactcagtta tggatttgga gcgttcggga aggattttgc gatcggcatt gtgtatatgt
     5341 acctcatgta ttactacacc gatgtcgtcg ggctgtctgt gggtttggtc ggtactttgt
     5401 ttctggtggc gaggatctgg gatgctatta acgatccgat tatgggatgg attgtaaatg
     5461 ctacgcgatc gcgatggggt aagttcaaac cctggatcct gatcggtacg ttggcaaact
     5521 ctgtaatctt atttctcctc tttagtgcgc atctgtttga aggtactact cagattgtct
     5581 ttgtttgcgt gacctacatc ctctggggca tgacttacac cattatggat attcccttct
     5641 ggtcgctggt tccaaccatc acgctcgata aacgtgagcg cgaacaactg gttccttatc
     5701 cgcgtttttt tgccagtctg gcaggctttg ttacggcagg tgtgacgcta ccatttgtta
     5761 attatgtcgg cggtggcgat cggggatttg gctttcagat gttcactctg gtactgatcg
     5821 ccttttttat tgtttcaacc atcatcactc tgcgcaatgt gcatgaagtc ttttcgtcag
     5881 acaatcaacc gtctgctgaa ggaagccatc tgacacttaa agccatcgtt gcgctaattt
     5941 ataaaaacga tcagctttca tgcctcttgg gtatggctct tgcttataat gtagccagca
     6001 acattattac cggatttgct atctattatt tctcatatgt tatcggtgat gcggatttgt
     6061 tcccctatta tctgtcgtat gcgggagctg ctaacctggt gacgttagta ttcttcccac
     6121 gcttagttaa atcattatcc cgacgcattt tatgggccgg agcatctatt cttccggtgt
     6181 taagctgtgg tgttctcctg ttaatggcat taatgagcta tcacaacgtc gtcctcattg
     6241 tgattgcggg tattttgctg aatgtgggaa cggcgctttt ctgggtatta caggtcatca
     6301 tggtggcaga taccgttgat tacggtgaat ataaactgca cgtacgctgt gaaagtatcg
     6361 cttactccgt gcagactatg gtggtgaagg gcggttcagc ctttgcggct tttttcattg
     6421 cggttgtgtt agggatgatt ggctatgtac cgaatgttga acagtctacg caagccctat
     6481 taggtatgca gtttattatg attgctctac caactctgtt tttcatggta acgctgattc
     6541 tctacttccg tttctatcgc ctcaatggcg acacgctgcg caggatccag attcatctgc
     6601 tggataaata tcgcaaagta ccgcccgagc ctgttcatgc tgatattccg gtcggtgcag
     6661 tgagtgatgt gaaagcctga cgtggacaat agctaacgaa aatggcctga tgcgatatgt
     6721 ttatcaggcc acgtcttaat gtaatgcttt ggatttgcaa attttgtaga ccggataagg
     6781 aattcacgcc gcatccggca tcaacaaagc gcaagttgtt atccggttat caagccaaag
     6841 cgccgtagct ggcggcaatg aaagcgagcg aggaatatca ccgtcgttaa tgcgccaagc
     6901 agcgcgcaga acatatcgga ttgcgtgtcc cactggtcgc cctgggtgcc gagaaaatca
     6961 tccgctccct gacccattgc cagcgctgcc caccactcga ttaattcata catcgcgctt
     7021 atcgccagcg ccacgcagca gaccaggaac gccaccattt tacgtccgcg cacgtacatc
     7081 ccgcgaacga gaatttctcg tgccaccagt gcaggtacca gcccctggaa aaagtgcccc
     7141 agcttgtcat acggattacg actcaacccc agccattcct gcacctcaaa accaacgggg
     7201 actttcgcgt aggtgtattg cccgccgacc atcaggatga tggcgtgaaa gaaaatgagc
     7261 gtatagagca gcggcgttaa cggataacgt ctggcggtgg caagcagtag cggcacgaca
     7321 ataatcaccg gtgtcacttc catcagccag gtgagtttgt catgggccga aatgccggta
     7381 taaatcagga ttaatgttag cgccagtgcg ccggtgttaa gaattaacgg cttgagtgtg
     7441 cgggtcatgg tgagttcgca agtcagggaa aatactgact attcaccagc aagcgtgaaa
     7501 ttacaatcgc aaaagaggtg gcccaggggg atcacctggc agcatgctgc caggcgctgg
     7561 gccgaagagg ttacttagtg cagttcgcgc actgtttgtt gacgatttgc tggaagaagt
     7621 cgttaccttt gtcatcgacc aggataaacg ccgggaaatc ttctacttcg attttccaga
     7681 tagcttccat acccagctcc ggataagcga cgcattccag atgcttgatg ctctgctgcg
     7741 ccagtaccgc cgccggaccg ccgatgctac cgaggtagaa gccgccgtgt ttatgacacg
     7801 cgtcggtaac ctgctgactg cggttacctt tcgccagcat gatcatgctg ccgccgtggg
     7861 attgcagcag atccacgtag gagtccatac ggcctgcggt ggttgggcca agtgaacctg
     7921 atggataacc ggcaggggtt ttcgccggac ccgcgtagta gatcgggtga tctttgatgt
     7981 actgcggaag ttctttaccg gcgtcaatca gctctttcag cttggcgtgt gcaatatctc
     8041 ggcccacgat aatggtgccg gtgagcgaca aacgagtgga taccgggtat tgcgaaagct
     8101 gggcgaggat ctctttcatc gggcggttaa ggtcaacttt caccgcttcg ccttcaccgg
     8161 cctggcgcag ttcttgtgga atgtactggc ctgggttgtg ttccagtttt tcgatccaga
     8221 taccttcgcg gttgattttc gctttaatgt tacggtcagc ggagcaggag acgcccatgc
     8281 cgaccgggca ggatgcgccg tgacgtggca gacggataac gcgaatgtcg tgcgcgaagt
     8341 atttaccgcc aaactgcgcg ccaagaccga gtttctgggc ctcttccagc agttcctgtt
     8401 ccagctggac atcgcggaac gcctgaccat gttcgttccc ttccgtcggc agttcatcgt
     8461 aatagtgagc gcttgctaac ttgacggttt tcaggttggt ttccgcagac gtaccgccaa
     8521 tcacaaacgc gatatggtac ggcgggcagg ctgcagtacc gagggtacgc attttctcga
     8581 cgaggaagtt tttcagtttg ccgggagtca gcagggcttt ggtttcctgg tagagatacg
     8641 ttttgttggc agagccgccg cctttcgcaa cgcaaaggaa tttgtactca tcgccatcta
     8701 ccgcgtacag gtcgatttgc gcaggcaggt tagtgccggt gttgacctct ttgtacatgt
     8761 ccagcgccgc attctgtgaa tagcgcaggt tatcttcgat ataggtgtta tagacgcctt
     8821 tcgacagcgc ttcttcatca ccgccgccgg tccacacgcg ctggcctttt ttaccgacga
     8881 tgatcgcggt gccggtatcc tggcaggtcg gcagcacgcc tttggcggcg atttcggagt
     8941 ttcttaagaa ttgcagcgcc acgtacttgt cgttttcgct ggcttctgga tcgtgaagaa
     9001 tagccgcaac ctgtttctgg tgtgccgggc ggagcataaa agaagcgtcg tgaaaggctt
     9061 gctgcgccag cagggtcagg gcttctggtt ccactttcag gatggtttcg ccgtcgaagt
     9121 cggcaacgct aacgtaatcg gaagtgagta gatagtattc ggtattgtct ttccccatcg
     9181 ggaaaggcgc ctggtagata aagggtttgt ttgacatagc ttccagcctg taactctgta
     9241 tttgttattc gaaaatggcg tgccgcgtag tcacgggcgg cacgcaaagt gcatttataa
     9301 gaacccgtac atcgcggcga agatccagcc gaagacgcac gatacgctca caccaatcaa
     9361 ccccggcaga ataaagctgt ggttgatgac gaagcgaccg atgtgggtgg tgccggaacg
     9421 gtcaaactga atcgctgcca gatcgctcgg ataagtcggc aggatgtaat aaccgtagca
     9481 agccggtgct gaagccacga tgtatgccgg atcaacgccg atcgccagcg cgaccggaac
     9541 aatcgccgcc agcgccgcag cctgagagtt tacaaacttg gaaaccagca gcagaacaat
     9601 ggcataggcc cacggatact ctttcaccat ttcacccagt acgccctgaa tttcagacat
     9661 atgcgcaccg aacatggttt ctgccatcca tgcgataccg tacaccgcca cgatggcgat
     9721 cataccggaa cggaagactt cgttttttga gatagacgcg ggattggttt tggtcaggat
     9781 aataatcagc gccccggtca gcagcataaa catctgaata accagtacca tcgacagcgg
     9841 tttgccgccg aaggatggac gcaggtccga atcagcacca agaagggcga ctacagcgat
     9901 tgcaccgagg aaaatccaca ttgccagcca gttgcttttc ggcagttttt tatcgagcag
     9961 cgtcgcggta tcaccgtaaa catactcacg gttttccggt acggagatga atttctggaa
    10021 ctcttcgtct ttatccagat ctttaccgcg gaaccagctg aagataccga tcgccaggat
    10081 accgattaac gtcgatggaa tggtgattgc cagcaggtcg aggaactcaa gatggcgacc
    10141 atcaaaggtg acattaccca gcattgcaac cagagacacg accgcaaccg acaccggact
    10201 ggcgataatc cccatctgtg caccgataga acttgccgcc atcggacgtt ccggacggat
    10261 gttgttctta atggcgacgt cgtagatgat cggcagaatg gtgtaaacca catgacccgt
    10321 accgcaaaga atggtcagtg tacaggtcac aaacggcgcg acaattgaga catatttcgg
    10381 gttgcggcgc agcaacttct cggcaatttg cagcatgaca tcaagaccgc ccgaagcttg
    10441 caaggtcgcc gatgccgcca ccaccgcaat gataaccagc atgacatcaa ctggtggttt
    10501 acctggctga aggtggaaga cgaagaccag aatgaccaga ccgataccgc ctaataaacc
    10561 cagcgcgata ccaccctttc tggcaccata aaacagacat atcagtatta tgataagttg
    10621 gatagtaaat aacatgtgtg aaccctcgcg ataatcctat ttaaattttt gctgaataga
    10681 tcacagtcac gttctgtttt gtatgaactg ttttcagagc ctgactaaat atccgtttgg
    10741 tcgttaccgg ctttagcaaa tacctcacag taaatattgg ctgattaaag cagcggcaaa
    10801 tttatgcact gtgataagcg gctttttcag agagaaaaac tctctggcga tgggtttata
    10861 gtttgtactg cgcagatgtt aatgttttgt ttgctgttat cttattgata tttatcggtc
    10921 tattttttgt tctcagggca gatatcatta ggtttaaaga ttaatctgat ctacccattt
    10981 gtgggtaaaa atacacataa tgcgggtgac ataatagtta attaactttt gttagcgttt
    11041 tgaaattaaa aacaccgttc acctgaagag atattaattt ttagcgatga tggagggata
    11101 attatatttg atctggcaca agttttactg atgaaggatg taacttgtgc caggggtatt
    11161 ttgcattacg gtaataatta ttacttacag ataaccagcg atccgttatt ggcaatattg
    11221 tttcagcagt gagtagtgtt ctgcctgaat acggtaacgg taaaccggac gccccgtgac
    11281 gccataatgg atactggtga acaagatgtg gcagttgacc agccagatga ggtattttcg
    11341 gcaggaaaca cgcgagatgt taacctcgtt agccagctcg tcggttgaaa actcatagtc
    11401 ctgatgcgcg tcaatccact ggcacagcgt gcgtaacgtc tgcggcgtta agccttttgg
    11461 caagcgacga ggatcctgtt cgttggagct gctgccgtgg attagctgat caagctcggc
    11521 ctggtcataa tactgatgtt tttccagcgc cattttcttt tgccgccagc cggtgagcgc
    11581 ctcttcaaag cgggaagcct ggaagggttt gatcaggtaa tccacgacac cgtaatgcag
    11641 cgaatcttta atggttgccg catcggctgc ggaggagatg acaatcacat cacttttgca
    11701 acgcgcgtta tgcaggacag gcagtaaatc gagcccgttc tctttttgca tatagatatc
    11761 gagcaatatc aggtcgatag gcgtatcgct attgaagata atctctttgg ctttctccag
    11821 cgtcgaggct gttccacagc attgaaagcc tgggatttgt gctacgtatc ggcgattcag
    11881 ctccgcgacc attgcgtcgt catcgataat taatacattg atcatctgtt cgacctctcc
    11941 ccgtcccagg gtatctggac aaaaaattgt gtgaaaatcc cgggttccga ttccacggcg
    12001 atgctgccgc cgagattttc tacctgttgt ttgacaagtg ctaaaccgac gcctcgctcg
    12061 cttccttttg tcgagacacc tttgtcaaaa atgtgatcga ttttgtcggg tgcgatcccc
    12121 ggtccatcat cgttaacttc gcagtgcagc cagccgtgac ggtagtgcaa tgttacgcta
    12181 atttcgccac cgggttccgg ccctaatgct tccagcgcgt tttctatcag atttcccaat
    12241 gtggtaatca gcgtcgcgac ctggtcctca ctgccgctgt ctggcagcag gctttcactg
    12301 tttaaaatca gcgtatggcc taaatcggtc gcgcggttaa tcttgctgat taaaaaacca
    12361 gcgataaccg gagatttgat cttacccagc agagagccaa tctcttcctg atagttattg
    12421 gctgttttga gaatgtaatc ttccaactgc ttataactct tcagatgcaa taatccgaga
    12481 atcacatgca atttattcat aaattcgtgg gatcgttcac gaagtgcatc agcatagttg
    12541 accagaccgt cgagtcgctg catcagttta cgaacttcag ttttgtccct gaaggttgaa
    12601 atggcaccga tgataacgcc attactgcgc accggaacgg tgttgatcag taatagccgg
    12661 tctttaatcg taatctcttc gtcgcggcgc ggcgtaccgt cgcgtaacac ttccgagaca
    12721 tctaccacct gtgaccatga gtggcttagc gtcgacagtt tctcatcgtc ctgcgactta
    12781 cggtaattca gcaattcttg tgcggcatcg ttgatcagcg tgacctcgcc gcgatcgtcc
    12841 acggcaacga cgccttcttt gatagactgc aacatggcct ggcgctgctc aaacagcgtg
    12901 gagatttcgt agggttccag gccgaaaagg atttttttca gtaccttaac cagaatgcag
    12961 gtgccaatca gtccgaccag catgccaaat aataccgacc agataatgct ccagcgactg
    13021 tcattgattt gttgggtcac gcggcttaac tcaaggccga tcgccaccac gccaatttgt
    13081 ttatgatttt catcgtagat gggggtaaat acgcgtaaag cctgcgccag aaaaccgcga
    13141 ttgatagcga cattttcttt gccattcagc gctttaagga tgtcatcacc tttaaatggc
    13201 tgaccaatac gctgggcttc aggatgcgag tagcgaagac tttgcatatc ggtaacgaca
    13261 ataaacagca gatcgttgcg tttgcgcacg gcttccgcga tggcctggat tccgctctcc
    13321 tgcggttttt tctgcaagcc ctgacggatt tccggcgagt cggcgagggt acgcgccact
    13381 gccagtgcct tgttggccag cccgtctcgc gtcatatcac tgatttgcga gaagtaaatc
    13441 agatgcacca ccaatagcac cgagaacagt accgcgctga ccattaagat cactgtggta
    13501 ctcaatttca tcggacgttt gcgtaacatg cggtagggca atgaatgtct catcagcttc
    13561 cttgtgtgac aaatttctta agcattatct ctgatgaggc gggtaattca aagggagtaa
    13621 gaatgattgg ctatataggg gaagagactc tggcaacgga aactgccagt gctgtatgaa
    13681 gattccaggg ctatgcttat agcgataatc atactgatga gagagggaaa gtcatggatc
    13741 aggcgctact ggacgagggt tatcgctgtt ataccggcga aaagatcgat gtctatttca
    13801 acactgcgat atgtcagcat tctggcaatt gcgtacgtgg caacggcaag ttatttaatc
    13861 tcaaacgaaa gccgtggatc atgccggatg aagtcgacgt cgtcactgtg gttaaagtga
    13921 ttgatacgtg cccgagcggc gcgctgaaat accgtcataa ataagcgagg gtaaaatgga
    13981 aatacgcgaa ggccacaata aattttacat taatgacgaa cagggcaagc aaatcgctga
    14041 aattgtcttt gtgccgaccg gagagaattt agcgattatc gaacataccg atgtcgatga
    14101 aagcctgaaa gggcagggga ttggtaaaca gctggttgcg aaagtcgtgg aaaaaatgcg
    14161 tcgggaaaaa cgaaaaatta tcccactatg cccatttgcg aaacacgaat ttgataaaac
    14221 gcgggagtat gatgatattc gcagttgatg ggagagtaca gagtcacgat atttttcatg
    14281 ctctccgcgg agtgatgcag gagagcatct gaagggtagg gggatgcaca aagaatgggc
    14341 agagagcgcg tttttttgtc ccaagtcatc ccctttactg agcaaaaaaa agaatatctc
    14401 ctatatgaga atcatcaatc ggggttaata atttttgcgt ccccagagca ttcaatattg
    14461 ataggagtca tattatggaa ggtaaaaaca agttcaatac ttatgttgtt tcttttgatt
    14521 atccatcatc ttattcctca gtgttcttaa ggttaagatc attgatgtat gatatgaatt
    14581 tctcttctat cgtggctgat gaatatggga taccacgaca attgaatgaa aattctttcg
    14641 caataacgac atcgttagcc gcaagtgaaa tcgaagattt aatcaggctt aaatgcttag
    14701 acttaccgga tattgatttt gacctcaaca ttatgacagt tgatgactat ttccgtcagt
    14761 tttacaagta gccaggaagg ataagaagaa cataaaaaat ggcactattc tctaaaatat
    14821 taatttttta tgtgattggt gtgaacatat cctttgtcat tatctggttt atctcacatg
    14881 agaaaacaca tattcgttta cttagtgcat tcctggtcgg aataacctgg ccaatgagtc
    14941 tgcctgtggc attacttttt tctctctttt aggagctgta gttgagtgga cccgctggtt
    15001 atcgtgaaac gaagcgtctc tcctcaaaac tggatttgcg gaacgacgaa cgaagcagtc
    15061 gcctgactgc ttcgttcatt aaagtgaaat ttatttctgt gggcgcatcg ccgggaagag
    15121 aataacgtcg cgaatagtat gactgtttgt aaacagcata atcattcggt cgataccaat
    15181 acccagacca gcggttggcg gcagaccata ttccagcgca gtcacgtaat cttcgtcata
    15241 gaacatggct tcgtcgtcac ctgcagcttt agcgttaacc tgttcctgga aacgttcagc
    15301 ctgatcttct gcgtcgttta attcgctaaa accattaccg atttcacgac caccgatgaa
    15361 gaattcaaaa cggtcggtga tttccgggtt aacatcatta cggcgcgcca gcggtgacac
    15421 ttctgccgga tattccgtaa taaaggttgg ctgaatcaga tgtgcttctg ccacttcatc
    15481 aaagatctcc gtgacaatac gtcccagccc ccagcttttc tctaccgtaa ttccgataga
    15541 ttcagctaat gctttagcag catcaaaatt atccaggtcg gccatatcgg tttctggacg
    15601 atattttttg attgcttcgc gcatggtgag tttttcaaac ggtttgccga aatcaaacac
    15661 atgctcgcca taagtgactt tagtggtacc cagaacctct tgtgccaggg tgcggaacag
    15721 ggactctgtc agttcaatca aatcgtggta atccgcatac gccatgtaga gttccatcat
    15781 tgtgaactca ggattatggc gaacagaaat accttcatta cggaagttac ggttgatttc
    15841 gaatacccgt tcaaaaccgc ctacaaccag acgtttcaga tacagctccg gcgcgatacg
    15901 caggtacata tctaaatcca gagcgttatg atgggtaata aacgggcgag cagatgcccc
    15961 acctggaatt acctgcatca tcggggtttc tacttccata aagccgcgcg cgaccatgaa
    16021 ctggcggata gcggccagaa tttttgaacg gacaacaaac gtttgacggg atttatcgtt
    16081 agcgatgagg tccagataac gttgacgata acggacttcc tgatcctgca gaccatggaa
    16141 tttatctggt aaaggacgta gtgcttttgt cagcaggcgc aactcagtac agtgaatgga
    16201 aagctcaccg gtttgcgtct taaacagcgt accgcgggca ccgataatgt cacccagatc
    16261 ccatttttta aactgatcgt tataaacacc ttctggcagg ctatctcttg caacgtacag
    16321 ttgaatacgg ccaccgacat cctgcaacgt tacaaaggag gctttcccca tgatacgacg
    16381 ggtcatcatt cggccagcaa ccgagacttc aatgtttaag gattccagtt cctggttatc
    16441 cttcgcatca aactcttcgt gcagctggtc agaggtatgg tcgcggcgaa aatcattggg
    16501 aaacgccaca ccttgctgac gtagtgccgc cagtttttcg cggcgatttc tcagttcatc
    16561 gttaaaatca atagcctcat tggctccccg tgtttcttgt tcagacattt tggttcctct
    16621 aaatccagct ttcaatttag cgtagataaa gagacagatc ggtacactgt attatctgcc
    16681 tcgactatta ataactcagt ttatcttatc gaaactaacg cttacctcaa gttgatatca
    16741 ctaataaata accatcaaaa tggtttaaat gacttattaa tctagatttg ctagtgttat
    16801 aaactgaaag ttaatttatt cataaccaat tgtttttacg acagttaatc gttgctctcc
    16861 tgtatcatat tcgtcggcgt gctaaacaga aaacgggtag caaaggccaa tacgacgatg
    16921 atcgcgacac aagccaacgt ccactctccc atctgagaaa agaatcgctg gtaagctgca
    16981 attgccatac cgctaatttg cgactctgtc gtctgctgtg ccacgacgcc tgccagccag
    17041 ttggcgaccg cgcctgttgc cagcatataa ataccggtta atacgccaga cattttcaga
    17101 cgcgtgattt gcgcaatcgc caccgggtca ataaagagtt cggcaaagcc cattagcgcc
    17161 agcccggata tcatcacggc cattgacgct tgaccgccag ccgctgcatg tcgggcatca
    17221 aatgccaaca acataaagcc acaagccatc agcagtaagc caaaggcaaa cttcagccag
    17281 acgcgcaatg ttgagttgcc gcggctttct ggcgacgcca gccaggccag tacaacccca
    17341 gcgagcatca ctgcaattgc attcaccgac tggaatagtg ctgtaggtac ttcaatattg
    17401 aatgcctgac gattcacaaa gcgatcgata aacaagctga tggtactgcc gccctgttgt
    17461 gccagtaccc agaacaacgt cccgacaaac atcaacaata caatttgcca aagagcacgg
    17521 cggtgttcgg ggaatttgat catcatgcgg gcaatgattt gtgcggcaat gaggcaaacg
    17581 atcgccagca aatatccgga ccagtcgttc tccagcagca gggtaaaaaa tactggggct
    17641 aaacagagca tcaccactaa ccagctccat actggtaagg caaatttcac gctagtgagc
    17701 gcttttttat ccatactacg cgtggactgg aaatgacgat gcccgcttaa gaaaatcaac
    17761 aaaccgataa acatgccgcc acccgcaagg gcaaagccaa catgccatcc ataccactga
    17821 gcagccaggc cgcaggcgat tggggcggcg atagaaccga tattgcccgc agcatacagc
    17881 agcgaaaaac cgccatcacg tcgatgatcg ttctcgtcgt agagctcgcc aagcaaacag
    17941 ctgatgtttg atttgaataa accgtagcca caaataatga ttgccagcgc cagatacagg
    18001 ctaaaggttg aatttgtatc aatgcccagc accacatggc caagggtcat taacagcgcg
    18061 ccggcaatca ctgcagtgcg gttgccgagc aggcggtcgg caagccagcc gccgagaata
    18121 ggggtaacgt aaaccagaga agcatatgcg ctgaacaggc tgatggcatg gttatcatca
    18181 aaaccaagct gatgggtgag atagagaatg agtaaggcac gcatgccgta aaaactgaag
    18241 tactcccaga tttggatcgc cacgatatag tatatcgcgc gcggctgtga gggtgttttc
    18301 atgtgttctc cttatgagca aaaaagggaa gtggcaagcc acttcccttg tacgagctaa
    18361 ttattttttg ctttcttctt tcaatacctt aacggtatag cggccatcag cctgacggta
    18421 tgcaccgtga atatcggttt caaagcccgg atagtgagcg ccgatttcac acagcatctg
    18481 caggaactcc agaaccggac ggctttcttc ggtgatcatt tcacccggca ttaccagagg
    18541 aactcccggc ggatacggaa ggatcatatt ggcgttaata cgacctacca tttcgtcgag
    18601 gtaaacttct tcggtcatac cgtgcagctc tttctggaat gcagcatacg gagtcattac
    18661 catcgtcggc agcacttcaa atgcgcggta catcagatcc ggcagattgt ggtgaacaat
    18721 cagtttgtgg atattctgag ccagttcctg aatacgcatg ttttcataga attcaggatc
    18781 ttcacgatac agagacggca gcatgttttt cacacgcagg ttcaggtcga acgcacgttt
    18841 gaagtcagtc agagcacgca gcaggctcag tgctttggtc ttatcgatac cgatgctgaa
    18901 caggaacagc aggttatacg gaccggtttt ctcaacaacg atgccatgtt cgtcgaggta
    18961 tttcgccacg atgctggccg gaataccaaa gtcgctcatg gtgccgtctt tttccatccc
    19021 cggagtcagc agggtgactt tgatcgggtc aagatacatg tgctcgttat cgatgttttt
    19081 gaagccgtgc caggtgctgt cagaacgcag cggccagcat tcagtcgtat cgatatgatc
    19141 cggctgccat acatcaaaga accagccatc agattccgtt ctcagacgtt tgatctcttt
    19201 acggaatttg atcgcacgtt caatggaacc gttgatcaga cgtttacctg cattgccttt
    19261 catcatcgcc gcagcggttt cagtggacgc cacgataccg tagtgcggag aagtggtggt
    19321 gtgcatcatg taggcttcgt taaaggtttc ttcgtttacg tcacctttaa cgtggatcat
    19381 ggaagcctga gagaacgccg ccagcagttt gtgagtggac tgggtttcgt aaatcacttt
    19441 cccttctaca cggccaccgc tcataccgca tttaccttcg taaatcggtg agaagttggt
    19501 gtaaggcacc cacgcggagt caaagtggat ggatttcaca tccagtgttt tcttgatgaa
    19561 gtcggtgttg tacagcagac catcataggt agagttggta attacagcat gtaccggcca
    19621 ggttgcgttt ggtgtttctt tcacgcgctt agcaatggta gcgtgctgga attcactctg
    19681 tgggatacca ccaagaatac cgtaagcgtt acgggtcggg cggaaataga ttggcgtaac
    19741 atcgctcatc atcatcaggt gggtcagcga tttgtggcag ttacggtcaa tcagaatggt
    19801 gctgcctgcc ggagcagagt acatgccaac aattttgttc gcagtggaag taccgttggt
    19861 caccatgtag ctgcggtctg cgttaaagac gcgagcgata tactgttctg cttctttgtg
    19921 tggaccactg tgatccagca gagaacccag ttcagatact gaaatggaaa tatcagattt
    19981 catggtattc ggaccaaaga aatcatagaa caggctacct accgggcttt tctggaatgc
    20041 agtaccgccc atgtgaccag gagtacagaa agtatattta ccttcacgaa catatttaaa
    20101 cagtgcttta gtcagcggag gcagaatagt gttgatatat tcgtcagtgg tctgcttgat
    20161 cttattagca atatcttcag cagcacccag cgcatattca aagaagctaa tctgtaaacg
    20221 caggtcattc aggcttacat cgagagtgga atacgtatta gcgaacgcgt acaacggcag
    20281 gttctcgttc attttgctaa tttcttcgca cagctcgaga ttatatttat cccagtcaaa
    20341 aataacgccg cacagacgcg cattgttttc gatcagtttt aataagtcgt cacggtcgtt
    20401 cgggtaaaca atctggaagt tcagacgttc aagcgcgcga tgaagttcac ggatgggttc
    20461 ttctttaaaa taaaccccca tgtgattcaa tattgcaata acgttcatag tcatatctcc
    20521 aggtaaaaaa ggcccctccc aacacatggg acaaaatgaa aggaggagcc tcggaaaata
    20581 cttttaatta atgtgcgtta gacgcggtgt ggttatccat tgaatggctc tggcgctcgt
    20641 gcattttgcg agcgtagaac atcaggataa tcaggctgac gatgaaggta cctgccagct
    20701 cgaaggagct tgcgcccatc agcgcgatga agcagaacac gcaacccagt acagagcaga
    20761 tcaggctgac aaagttgcgg atgttaacgc cttcaaaacg aatcaggtca acgcaagagt
    20821 agaagtacgg cagcatagtc agcagtactg cgataccggt cagttcaccg aacaggtcag
    20881 atgctttacc accggcagag ttcatcagag tgatgaggat catcagggca gtcattttca
    20941 ctgcagccag cagcagacct tttttcggaa taccgttgct gtcgacttca ccataaactt
    21001 tcgggaagtt accgtcgtta gcggcacgta cacctgcctg gcctaccaac atcatccagg
    21061 agcccagaga agtcaggcac gcaaaggcgg tgaatgcaga aaccagcggc gcagcccagt
    21121 taccgaggat ggttgaagca ctgattgcaa acggagcacc ggaagctgcc attacagaag
    21181 atggatacat accggaaagc acctgagtcg cagcgatgta aacaatacct gctaaaccag
    21241 tacccagcat ggttgccagc ggaacggtac gtttcgggtt tttaaccata ccagtactta
    21301 ctgctgcgga ttcaacaccc acgaaggccc acaggcagag cagaatactt ttaatgatcg
    21361 catgaccatc agtggtatcc gcagtattcc agttagctgc ataagttgcc gcatcaaacc
    21421 aatgccagcc aacaatagca gtcatcacca caggaataag aaccagcacc agaccaatag
    21481 tggttaaacg gcttacccaa gtaccgccga gcatatttac aaaggtaaat acccagacga
    21541 tagcaataca ggcgataccc gccggaacag gatcatttaa tactgggaag aaggtggaaa
    21601 gataagatac cgcggtaata ccaatcgcca ggttaccaat ccagttagca tggtaataaa
    21661 gaacacctgt ctgaaaacca aatgcagggg aaatttctcc ggcataagca attgggccac
    21721 cttgttgcgg gttttttgtt gccagtcggg catatacata cgccagcgac attgcaccaa
    21781 taatagagat aatccaaccc cagatagcaa taccaccgat acttgctagg ttcgcaggta
    21841 ataatgcaat accgctcccc atcatattac cggcaacaac accggtacag gcaaatagcc
    21901 cgatcttctt ggcagaactc atgctcttct cctaatttca tttttgaatt tggagtccgg
    21961 gtcatgatgt ataactattt cctgaccaga ccaaactggc gctaagaata ctcacgaaaa
    22021 aaggattaat cctaaagatt aggtgaaata atacaaaagt ttcta
//
LOCUS       DAPGWB010000072        22022 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.072, whole genome shotgun sequence.
ACCESSION   DAPGWB010000072 DAPGWB010000000
VERSION     DAPGWB010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 22022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22022
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.072"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(64..2133)
                     /gene="glyS"
                     /locus_tag="RHX79_002605"
     CDS             complement(64..2133)
                     /gene="glyS"
                     /locus_tag="RHX79_002605"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDV2197760.1"
                     /translation="MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGT
                     VQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITV
                     DQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRP
                     VHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIAD
                     YAERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEA
                     LVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFF
                     NTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC
                     ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV
                     RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKA
                     VSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDK
                     LEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV
                     ADISLLQ"
     gene            complement(2143..3054)
                     /gene="glyQ"
                     /locus_tag="RHX79_002606"
     CDS             complement(2143..3054)
                     /gene="glyQ"
                     /locus_tag="RHX79_002606"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDV2197761.1"
                     /translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMT
                     CLRALGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSL
                     KELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
                     GEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDF
                     LFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRI
                     RTLTKAVAEAYYASREALGFPMCNKDK"
     gene            complement(3149..3448)
                     /locus_tag="RHX79_002607"
     CDS             complement(3149..3448)
                     /locus_tag="RHX79_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsaB family lipoprotein"
                     /protein_id="HDV2197762.1"
                     /translation="MMMNAFFPAMALMVLVGCSTPSPVQKAQRVKVDPLRSLNMEALC
                     KDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR"
     gene            3623..4618
                     /gene="wecH"
                     /locus_tag="RHX79_002608"
     CDS             3623..4618
                     /gene="wecH"
                     /locus_tag="RHX79_002608"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyltransferase WecH"
                     /protein_id="HDV2197763.1"
                     /translation="MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIAN
                     VLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINM
                     ELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMVVIGIIANPNTV
                     PQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFII
                     SRGTLYELQWRGNFADTWYLYCGPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLG
                     IYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSMLVQRIDRNRLVS"
     gene            complement(4660..5097)
                     /locus_tag="RHX79_002609"
     CDS             complement(4660..5097)
                     /locus_tag="RHX79_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiaB family inner membrane protein"
                     /protein_id="HDV2197764.1"
                     /translation="MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYY
                     FAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLS
                     EKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE"
     gene            complement(5143..5484)
                     /locus_tag="RHX79_002610"
     CDS             complement(5143..5484)
                     /locus_tag="RHX79_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197765.1"
                     /translation="MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTAT
                     FGNYAYLRAEKLGQLDNFFTHICQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVC
                     LFGQMRLFRSV"
     gene            complement(5653..7107)
                     /gene="xylB"
                     /locus_tag="RHX79_002611"
     CDS             complement(5653..7107)
                     /gene="xylB"
                     /locus_tag="RHX79_002611"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HDV2197766.1"
                     /translation="MYIGIDLGTSGVKVILLNEQGEVVASQTEKLTVSRPHPLWSEQD
                     PEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCA
                     QECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRM
                     TGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAK
                     AWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHS
                     FCHALPQRWHLMSVMLSAASCLDWVAKLTGLCNVPALIAAAQQADESAEPVWFLPYLS
                     GERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTL
                     IGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLP
                     LEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA"
     gene            complement(7179..8501)
                     /gene="xylA"
                     /locus_tag="RHX79_002612"
     CDS             complement(7179..8501)
                     /gene="xylA"
                     /locus_tag="RHX79_002612"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HDV2197767.1"
                     /translation="MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRF
                     AACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHD
                     VDVSPEGASLKEYINNFAQMVDVLAGKQEESGVKLLWGTANCFTNPRYGAGAATNPDP
                     EVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVE
                     HKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAG
                     HSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTG
                     GLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNS
                     ELGQQILKGQMSLADLAKYAQEHNLSPVHQSGRQEQLENLVNHYLFDK"
     gene            8867..9859
                     /gene="xylF"
                     /locus_tag="RHX79_002613"
     CDS             8867..9859
                     /gene="xylF"
                     /locus_tag="RHX79_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV2197768.1"
                     /translation="MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDR
                     DIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA
                     KQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNN
                     AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVAS
                     NDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAE
                     IAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVVKDGFHKESEL"
     gene            9937..11478
                     /gene="xylG"
                     /locus_tag="RHX79_002614"
     CDS             9937..11478
                     /gene="xylG"
                     /locus_tag="RHX79_002614"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HDV2197769.1"
                     /translation="MPYLLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKS
                     TLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENI
                     FLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEQETSVLLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDG
                     QHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKR
                     VNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQA
                     IAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAEEQKCILESIQQL
                     KVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQ
                     LVQQGIAVIVISSELPEVLGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHV
                     EKQSV"
     gene            11456..12637
                     /gene="xylH"
                     /locus_tag="RHX79_002615"
     CDS             11456..12637
                     /gene="xylH"
                     /locus_tag="RHX79_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose ABC transporter permease XylH"
                     /protein_id="HDV2197770.1"
                     /translation="MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFT
                     WTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICD
                     VWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGT
                     TVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVV
                     GRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLE
                     AARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGG
                     TSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRR
                     S"
     gene            12715..13893
                     /gene="xylR"
                     /locus_tag="RHX79_002616"
     CDS             12715..13893
                     /gene="xylR"
                     /locus_tag="RHX79_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator XylR"
                     /protein_id="HDV2197771.1"
                     /translation="MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED
                     FRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATD
                     NYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL
                     ETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGI
                     DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS
                     TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI
                     HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML
                     "
     gene            complement(14001..14825)
                     /locus_tag="RHX79_002617"
     CDS             complement(14001..14825)
                     /locus_tag="RHX79_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein bax"
                     /protein_id="HDV2197772.1"
                     /translation="MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKAS
                     NKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWL
                     ISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
                     ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPA
                     YSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM"
     gene            15145..17175
                     /gene="malS"
                     /locus_tag="RHX79_002618"
     CDS             15145..17175
                     /gene="malS"
                     /locus_tag="RHX79_002618"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HDV2197773.1"
                     /translation="MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPK
                     GTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQIDTRSGTPT
                     LMISIQNAAEPVASLVRECPKWDGLPLTVDVSATFPEGAAVRDYYSQQIAIVKNGQIT
                     LQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMT
                     EIGTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYY
                     TQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYL
                     SGDEVKKTLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNP
                     GFDDLTMSLAFLPDIKTESTTASGLPVFYKNKTDTHAKAIDGFTPRDYLTHWLSQWVR
                     DYGIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHG
                     VMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDT
                     RLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSA
                     ANVAHWQKISQFRARHPAIGAGKQTTLSLKQGYGFVREHGDDKVLVIWAGQQ"
     gene            17353..18606
                     /gene="avtA"
                     /locus_tag="RHX79_002619"
     CDS             17353..18606
                     /gene="avtA"
                     /locus_tag="RHX79_002619"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HDV2197774.1"
                     /translation="MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIP
                     EMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEAQNIAL
                     TNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELL
                     PEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVID
                     NAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGI
                     ISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPEDRCLIHK
                     PEGAIFLWLWFKDLPITTEQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYV
                     PEPEKIEAGVKILAEEIERAWAESH"
     gene            complement(18758..19231)
                     /locus_tag="RHX79_002620"
     CDS             complement(18758..19231)
                     /locus_tag="RHX79_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDV2197775.1"
                     /translation="MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRI
                     RVIKDHSWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFG
                     AMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV"
     gene            complement(19333..20181)
                     /gene="yiaJ"
                     /locus_tag="RHX79_002621"
     CDS             complement(19333..20181)
                     /gene="yiaJ"
                     /locus_tag="RHX79_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator YiaJ"
                     /protein_id="HDV2197776.1"
                     /translation="MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCP
                     LAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIH
                     IAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMG
                     KIYMAFGHPDYVKSYWENHQHEIQPLTRNTITELPAMFDELAHIRESGAAMDREENEL
                     GVSCIAVPVFNIHGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRD
                     DQGAIT"
     gene            20382..21380
                     /gene="yiaK"
                     /locus_tag="RHX79_002622"
     CDS             20382..21380
                     /gene="yiaK"
                     /locus_tag="RHX79_002622"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HDV2197777.1"
                     /translation="MKVTFEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSH
                     GVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAA
                     DHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLI
                     VAIPSTPITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRI
                     LPMGYWKGSGMSIVLDMIATLLSDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPT
                     RDAKLQRIMDYVTTAERADENQAIRLPGHEFTTLLAENRRNGITVDDSVWAKIQAL"
     gene            21392..21859
                     /locus_tag="RHX79_002623"
     CDS             21392..21859
                     /locus_tag="RHX79_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDV2197778.1"
                     /translation="MIFGHIAQPNPCRLPAAIEKALDFLRATDFNALEPGVVEIDGKN
                     IYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVSESLLEQRDI
                     IFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCILQTASEIRKIVVKVALTALN"
BASE COUNT         5566 a         5597 c         5395 g         5464 t
ORIGIN      
        1 ctgtattatt tagcgataat aaaaaaagcc tgccagatgg caggcttttt aataacggcg
       61 ttattactgc aacagcgaaa tatccgcaac gcgcaggaac agttcgcgca gtttctccag
      121 catggtcaga cggttgagac gcaattcttt gtcatcaacc atgaccatca ctttatcgaa
      181 gaaagcatca accggctcac gcagctctgc cagttcgacc agcgcatcct ggtaacgacc
      241 ttccgcaaag tacggctcca gcttgtcacg tagcaccaca acctgcatcg ccagtttaat
      301 ttcttccggc tctttcaggg tagaggcatt cacgcggtcg ctcagcactt cgtcagattt
      361 cgccagaatg ttagatacac gtttgttcgc cgccgccagt gcagcagctg catccagggt
      421 acggaaatgc gataccgctt tcatacgggc atcgaaatca gccggacgag tcggacgacg
      481 cgccagtacc gcctggatgg tgtcaacggt ataaccttcg tcctgatacc aggcgcggaa
      541 gcgaccgagc ataaagtcga taacatcatc aactacgttg gcattagtca gcttatcgcc
      601 atacagacgc accgcttctt cggtcagcgt ttgcagatca aggttgaggt tcttctcaac
      661 gataattcgc agcacgccaa gtgcggcacg acgcagcgca aacgggtctt tgtcgccttt
      721 cggatgctgg ccgataccga agatacccgc cagagtatcc atcttgtcag caatcgccag
      781 cgcacaggct accgggttag acggcaggtc atcaccggca aagcgcggct gatactgctc
      841 attcagcgcc accgcgacat cttccgcttc gccatcgtga cgcgcatagt gcatccccat
      901 aacgccctgg gtgtcggtga actcgaagac catgttggtc atcaggtcac acttagacag
      961 caggcccgca cgggttgcgt ggttaacgtc agcgccaatc tgttcagcaa tccagccagc
     1021 cagcgcctgg atgcggtcag ttttgtcacg cagcgtaccc agctgttgct ggaacagcac
     1081 ggtttgcagg cgcggcaggt tatcttccag acgtttttta cggtcggtgt tgaagaagaa
     1141 ctcggcatcc gccagacgcg gacgaacgac tttctcgtta ccggagataa tttgctgcgg
     1201 atctttcgat tcgatgttgg caacgaagat gaagttcggc agcagtttgc cgtcgttcgc
     1261 atacaccggg aagtatttct ggtcaccttt catggtgtaa accagcgctt cagccggcac
     1321 cgcgaggaat ttctcttcga attttgcggt cagaacgacc ggccactcca ccagcgaagc
     1381 cacttcttcc agcaggcttt cgcttaagtc agcgttaccg ccaatcttac gcgctgcttc
     1441 ttcggcatcg gctttaatct tcgctttacg ttctgcgtaa tcggcgatga ctttcccacg
     1501 ctcacgcaga atttccggat actgatcggc gttatcgatg gtgaattccg gctcgcccat
     1561 aaagcggtgg ccgcgaatca cgcgatcgga ctgaatgccc agaatggttg ccggaatgac
     1621 tttgtcgccc agcagcaggg tcacggtgtg caccggacgc acgaagtgca cgtcgcttgc
     1681 gccccaacgc atcagtttcg ggatcggcag tttcgccaga gaagtcgcaa ccatattcgg
     1741 cagcagtgct tcggtgcttt cgcccttcac atgggcgcga tacagcagcc attcgccttt
     1801 atcggtagtc agacgctcag cctggtcaac ggtaataccg caaccacgcg cccaaccttc
     1861 tgccgctttg ctcggtttgc cttcagcgtc gaacgcctgg gcaatcgccg ggccgcgttt
     1921 ttcgatttca cgatccggtt gcgcttccgc caggttagct actttcagcg ccagacgacg
     1981 cggagcagca aaccattgaa cggtgccgtg tgcgaggcca gcgttatcca gctccgcagt
     2041 aaaattcgca gcaaaggact cagccaggct gcgcagtgct tttggtggca gctcttcagt
     2101 gccgatttcc accagaaaag ttttctcaga catagccgcc tcttacttat ctttgttgca
     2161 catcgggaag ccgagggctt cacgggaagc gtagtatgct tctgccactg ctttggtcag
     2221 ggtgcgaatg cgcagaatgt agcgctgacg ctcggtgacg gagatggctt tacgcgcatc
     2281 cagcaggttg aagctgtggg cggctttcag aatacgctcg taggctggca gcggcagcgg
     2341 attttccagc gccagcagct gctgcgcttc tttctcgtac tgctcaaagc aggtgaacag
     2401 gaagtccaca tccgcgtatt cgaagttgta agtggactgc tccacttcgt tctgatggaa
     2461 cacgtcgccg taggtggttt tacccagcgg gccgtcgctc cagaccaggt cgtaaacgct
     2521 gtctacgccc tgaatgtaca tggccagacg ttccagaccg taggtgatct cgccggtaac
     2581 cggtttacac tccagaccac caacctgctg gaagtaagtg aactgcgtca cttccatgcc
     2641 gtttagccac acttcccagc ccagtcccca ggcacccaga gtcgggtttt cccagttatc
     2701 ttccacgaaa cggatgtcgt gaatagtcgg gtccatgccc agctctttca gagaaccgag
     2761 gtacagctcc tgaatattgt ccggcgatgg cttaatgacc acctgaaact gatagtagtg
     2821 ctgtaaacgg ttggggtttt cgccgtagcg accatcggtc gggcgacgag aaggctgaac
     2881 ataagcagcc gccatcggtt ctggccccag cgcgcgcaga caggtcattg ggtgagaggt
     2941 tcccgcgccg acttccatgt ccaatggttg aacaatggtg cagccctggc gagcccagta
     3001 atcctgtaag gtcaggatca agccctggaa ggtcctggta tcaaactttt gcatattatt
     3061 tcgtgctgga tacgtgtgga tttaaaggaa gggatcagta tacccgctgg atggaagata
     3121 tacagtacga aacgggaaaa agcagggctt aacgcatgga aagatgcaaa aaatggccat
     3181 ctgcgtcaaa agaacagaca aactgctctt tacggaaggt ataaccgcgc atttcatagc
     3241 ttccctggaa ctgttcgaag gcggtgacgt cgattttttg ctcgccggtg ttataacgtt
     3301 ttgccgcctg atccttgcat aacgcttcca tattcaacga acgcagagga tcaaccttta
     3361 cccgttgtgc tttctgcacg ggtgacggtg tagaacaacc cactagcacc ataagcgcca
     3421 ttgccggaaa gaaagcgttc atcatcatta aattaccgtc tggtttgcag gtgagtctta
     3481 ttatttatat cggtatagtg gctgatatct tacgaatttc cttaagcctc tataagctgt
     3541 agtgataaaa ctcagattat tccagtgcgc caactgaatg atttatcggt cagacttttt
     3601 ttaaccagat acagagacac agatgcagcc caaaatttac tggattgata acctgcgagg
     3661 gatagcgtgt ttaatggtgg tgatgattca caccactacc tggtatgtga ccaatgctca
     3721 tagtgttagc cccgtcacct gggatatcgc caatgttctg aattctgcct ctcgtgtcag
     3781 cgtgccgcta tttttcatga tatccggcta tctctttttt ggcgaacgca gcgcccagcc
     3841 gcgccatttc ttgcgtatcg gcttatgcct gattttttat agcgcaatcg cactgctcta
     3901 cattgcgctg tttacctcca tcaatatgga gttagcgctg aaaaacctgc tgcaaaagcc
     3961 agtgttttac cacttgtggt ttttcttcgc gattgcggtg atttatctgg tttcaccgct
     4021 gattcaggtg aagaacgtcg gcggaaaaat gttgctggtg ctaatggtgg tgattggcat
     4081 tatcgctaac ccaaacacag tgccgcagaa aattgacggt tttgaatggc tgccaattaa
     4141 cttatatatc aatggcgata ctttttacta cattctgtat ggcatgttgg gccgcgctat
     4201 agggatgatg gacacacagc ataaagcact gtcgtgggtg agcgccgcgc tgtttgcgac
     4261 gggggttttt attatctctc gcgggacatt atatgaattg cagtggcgcg gaaattttgc
     4321 cgatacctgg tatctttact gtgggccgat ggtttttatc tgcgcaatcg cgctattgac
     4381 tctggttaaa aacacgctgg atacgcgtac cattcgcgga cttggcttaa tctcccgcca
     4441 ttcattgggt atatacggat tccacgcctt gattatccat gcgctgcgca cccggggaat
     4501 tgagcttaaa aattggccaa tactggatat tatttggatc ttttgcgcga cgttggcagc
     4561 gagtttgtta ctttctatgc tggtacaacg aatcgacaga aacagattag tgagttaagt
     4621 aaaagcccgt tcacattgga ctgaccgggc ttacgtgaat tattcgctgt attcttcctg
     4681 ggtaacctgt gtttcttttg gcgggtttat tccggcatca cgaatattct tctgcaccgc
     4741 tactgcacca aacaagctta agaagaaagc cagtccataa aaaccttttt cactgagtaa
     4801 taatgtcgca ttccacagac ctaccatcag taatgcaaca gagataataa agacagtcag
     4861 gcaggtcata taataaatgg aagtggtcgg tatgccttca tacttgtccc gaacggtctt
     4921 ttgataagac gctgcagaaa acagtcctaa caccagtacg gcaaaataat accctttttc
     4981 atttaactgc atctctgcat tccatagccc taacagatag gtaacgatac caccaacgag
     5041 agctatccat gacacaatac taaaggccgg tgaataggtt gatattttgt tgtccatcac
     5101 agtattcctt tcattcctga atgtgtaaga gctttatgtt gctcataccg agcgaaacaa
     5161 acgcatttga ccaaacaagc agacaaaaaa ggcgatgggg tagatcacca tttcataagc
     5221 attgataggt gcatttaaaa caccgataaa caagagaccg atagtgatta acgcaactaa
     5281 ctggcagata tgggtaaaaa aattatccag ttgcccgagt ttttctgcgc gaagatatgc
     5341 atagttacca aaagttgctg tcattaacac gccaagaaaa tagccttttc cacttagcaa
     5401 tgggcatgag atccatagcc caaccagata aaccagcgcc ccgacaacaa ataatagttt
     5461 tgccacagtt tttgaggttt tcataacgat ctccatatct accagcgata cattacgagt
     5521 aaccaacgaa agacaaaact gaaaaatgcc attaacaaat gattttcaga ataaattcat
     5581 actaaatatt aattaattag tgagatatat agatgtgaat tatcccccac ccggtcaggc
     5641 aggggataac gtttacgcca ttaatggcag aagttgctga tagaggcgac ggaacgtttc
     5701 acgtcgtggc tgataagcgg cataacgctg cgcatctggt agatgcgact gttctaacgg
     5761 tagctgcggc aacaactcaa tgagcgattt ctctggattc gccgcaatct gcgccagcct
     5821 tgctgcgccc agtgctggcc ccacatcccc ccccgtacgg taatcgagct gctgaccgct
     5881 gatatccgcc agcatctgac gccagtactc actacgcgcc ccgccaccaa tcaacgtaac
     5941 actttgcggt ttaatgccgc aggcatgcac gacatccatg ccatctgcca gcgcataacc
     6001 cacgccttcc agcactgctc gcgccagttc attggggcca tgttgatgag tcaaaccaaa
     6061 gaaaaccccc ttcgcctggg gattattgtg tggtgtacgc tcgccggaaa gataaggcag
     6121 aaaccaaact ggctcggcac tttcatcagc ctgttgagct gcagcgatta aagctgggac
     6181 attgcacagg ccggttaatt tcgcgaccca atccagacac gatgctgcac tcagcattac
     6241 agacattaaa tgccaacgct gcggtagcgc atggcaaaag ctgtgtacag cgctttctgg
     6301 cttgcttaag aacccttcgc tgacagcaaa atagaccccc gacgtcccca gcgataacat
     6361 tgcctgatta gcatcaacca ttcccacacc aactgcacca gctgcattgt cgccaccgcc
     6421 tgcgacaact ggcaccgtcg ccatacccca cgctttcgca acttcaggta acaaagcacc
     6481 agtaatttcg ctgccttcat ataatgcggg catctggtca cgagataagt cgcaagcctg
     6541 cagcatgacg tcactccagt cacgctttgc gacatccagc cacatggtgc cagctgcgtc
     6601 agacatatcg ctggcaaact cccccgtcat acgcagacgc aagtaatctt tcggtaataa
     6661 tactttgtcg atttgacgga atatctccgg ctcatgccgc tgaacccata gcaatttagg
     6721 cgcagtaaat ccgggcatca tcaggttgcc ggtaatcact cgtgattgcg gaactctcgc
     6781 ttccagcaaa gtgcactctt gcgcacagcg cccgtcgttc cacaaaatgg cagggcgcaa
     6841 tacccgttgt tgagcatcca gtaaggttgc tccatgcatc tggccggcaa tacccaatgc
     6901 tttaacgtcc tgcagagaat gctgatcgcc cagagctttc attgcgcgat cagttgcctg
     6961 ccaccactgt tccgggtctt gttccgacca gagtggatgc gggcgcgaaa cggtcagctt
     7021 ttccgtttgc gaagcaacca cctcaccctg ctcgttgagc aaaataactt ttacgcccga
     7081 ggtgccaaga tctatcccga tatacatatc gatcgttcct taaaaaaatg cccggtatcg
     7141 ctaccgataa ccgggccaac ggactgcaca gttagccgtt atttgtcgaa cagataatga
     7201 tttaccagat tttccagttg ctcctggcga ccactctgat gcaccggaga caaattatgt
     7261 tcctgagcat atttggctaa atctgccagt gacatttggc ctttcaggat ttgctggccc
     7321 aattcgctat tccagccgga ataacgctgc gcgatgcgtt tatccagctc gccatcttca
     7381 atcatgcgcg ctgcaatttt cagcgccagt gccatcgtat ccatcgcgcc gatatgaccg
     7441 taaaacagat catatttatc agtactttga cgacgtactt tggcatcgaa gttcagacca
     7501 ccggtggtga aaccgcctgc tttgagaatt tcatacatca ccagcgcatt ctcttccaca
     7561 ctgttcggga actggtcggt gtcccagccc agttgcgcat cgccacggtt ggcgtcgaca
     7621 gaaccgaaca ggccaagcgc aatggcggtg gcaatttcat gatggaaaga gtgacctgcc
     7681 agcgtcgcgt ggttagcttc aatgttcagt ttaatctctt tttccagacc aaactgtttc
     7741 aggaagccat agaccgtcgc ggcatcgtaa tcatattgat gtttggtcgg ttcttgcggt
     7801 ttcggttcga taagcaacgt gccctggaaa ccgattttat gtttatgctc aaccaccatc
     7861 tgcataaagc ggcccagctg ttcacgctcc tgacgcaagt cggtatttaa cagcgtttcg
     7921 taaccttcac gaccgcccca caggacatag ttttcaccgc ccaatttatg ggttgcttcc
     7981 atcgctgtaa caacttgcgt tgccgcccag ctgaagactt caggatctgg gttcgtcgcc
     8041 gcacccgcgc catagcgagg gtttgtaaag cagttagcgg ttccccacag cagcttcacg
     8101 ccgctctctt cttgcttgcc tgccaggaca tcaaccattt gcgcaaaatt attgatgtac
     8161 tcttttaacg acgcgccctc aggggaaaca tccacatcgt ggaagcaata aaatggcaca
     8221 tgtaacttgt ggaaaaactc aaatgcgaca tctgctttac gcttcgccaa cgccagtgcc
     8281 tcaccaggct gctgccacgg acgattaaac gcccccacac caaacatgtc cgccccgttc
     8341 cagcagaatg tgtgccagta gcaggcggca aaacgcaagt gctcttccat acgcttgccc
     8401 aacaccagtt cgtcgggatt gtagtgacgg aatgctaacg ggtttgagga ttttgagcct
     8461 tcataacgaa cgcgatcgag ctggtcaaaa taggcttgca tattgaactc cataatcagg
     8521 taatgccgcg ggtgatggat gatgtcgtaa tattgggcac tccctttcag ttgctcaatt
     8581 atgttatttc acactgctat tgagataatt cacaagtgtg cgctcgctcg caaaataaaa
     8641 tggaatgatg aaactgggta attcctcgaa gagaaaaatg caataggtac aattgcgcaa
     8701 caaaagtaag atctcggtca taaatcaaga aataaaccaa aaatcgtaat cgaaagataa
     8761 aaatctgtaa ttgttttccc ctgtttagtt gctaaaaatt ggttacgttt atcgcggtga
     8821 ttgttactta ttaaagctgt cctctaacta cagaaggccc tacaccatga aaataaagaa
     8881 cattctactc accctttgca cctcacttct gcttaccaac gttgcggcac acgccaaaga
     8941 agtcaaaata ggtatggcga ttgatgatct ccgtcttgaa cgctggcaaa aagatcgaga
     9001 tatttttgtg aaaaaggcag aatctctcgg cgcgaaagta tttgtacagt ctgcaaatgg
     9061 caatgaagaa acacaaatgt cgcagattga aaacatgata aaccggggtg tcgatgttct
     9121 tgtcattatt ccgtataacg gtcaggtatt aagtaacgtt gtaaaagaag ccaaacaaga
     9181 aggtattaaa gtattagctt acgaccgtat gattaacgat gcggatatcg atttttatat
     9241 ttctttcgat aacgaaaaag tcggtgaact gcaggcaaaa gccctggtcg atattgttcc
     9301 gcaaggtaat tacttcctga tgggcggctc gccggtagat aacaacgcca agctgttccg
     9361 cgccggacaa atgaaagtgt taaaacctta cgttgattcc ggaaaaatta aagtcgttgg
     9421 tgaccaatgg gttgatggct ggttaccgga aaacgcattg aaaattatgg aaaacgcgct
     9481 aaccgccaat aataacaaaa ttgatgctgt agttgcctca aacgatgcca ccgcaggtgg
     9541 ggcaattcag gcattaagcg cgcaaggttt atcagggaaa gtagcaattt ccggccagga
     9601 tgcggatctc gcaggtatta aacgtattgc tgccggtacg caaactatga cggtgtataa
     9661 acctattacg ttgttggcaa atactgccgc agaaattgcc gttgagttgg gcaatggtca
     9721 ggaaccaaaa gcagatacca cactgaataa tggcctgaaa gatgtgccct cccgcctcct
     9781 gacaccgatc gatgtgaata aaaacaacat caaagacacg gtagttaaag acggattcca
     9841 caaagagagc gagctgtaag cgttacgccc cggcgcggag cgggggcgtg atttctctcc
     9901 atgccgcgtg aatgaattgg cttaggtgga gtcgttatgc cttatctact tgaaatgaag
     9961 aatattacca aaaccttcgg cagtgtgaag gcgattgata acgtctgctt gcggttgaat
    10021 gctggcgaaa tcgtctcact ttgtggggaa aatgggtctg gtaaatcaac gctgatgaaa
    10081 gtgctgtgtg gtatttatcc ccatggctcc tacgaaggcg aaattatttt tgcgggagaa
    10141 gagattcagg cgagtcacat ccgcgatacc gaacgcaaag gtatcgccat cattcatcag
    10201 gaattggccc tggtgaaaga attgaccgtg ctggaaaata tcttcctggg taacgaaata
    10261 acccacaatg gcattatgga ttatgacctg atgacgctac gctgtcagaa gctgctcgca
    10321 caggtcagtt tatccatttc acctgatacc cgcgttggcg atttagggct tgggcaacaa
    10381 caactggttg aaattgccaa ggcacttaat aaacaggtgc gcttgttaat tctcgatgaa
    10441 ccgacagcct cattaactga gcaggaaacg tcggttttac tggatattat tcgcgatcta
    10501 caacagcacg gtatcgcctg tatttatatt tcgcacaaac tcaacgaagt caaagcgatt
    10561 tccgatacga tttgcgttat tcgcgacgga cagcacattg gtacgcgtga tgctgccgga
    10621 atgagtgaag acgatattat caccatgatg gtcgggcgag agttaaccgc gctttaccct
    10681 aatgaaccac ataccaccgg agatgaaata ttacgtattg aacatctgac ggcatggcat
    10741 ccggtcaatc gtcatattaa acgagttaat gatgtctcgt tttccctgaa acgtggcgaa
    10801 atactgggta ttgccggact cgttggtgcc ggacgtaccg agaccattca gtgcctgttt
    10861 ggcgtgtggc ccggacaatg ggaaggaaaa atttatattg atggcaaaca ggtagatatt
    10921 cgtaactgtc agcaagccat cgcccagggg attgcgatgg tacccgaaga cagaaagcgc
    10981 gacggcatcg ttccggtaat ggcggttggt aaaaatatta ccctcgccgc actcaataaa
    11041 tttaccggtg gcattagcca gcttgatgac gcggaagagc aaaaatgtat tctggaatca
    11101 attcagcaac tcaaagttaa aacgtcgtcc cccgatcttg ctattggacg tttgagcggc
    11161 ggcaatcagc aaaaagcgat cctcgcccgc tgtctgttac tcaacccgcg cattctcatt
    11221 cttgatgaac ctaccagggg tattgatatt ggcgcgaaat atgagatcta caaattaatt
    11281 aaccaactcg tccagcaggg tattgccgtt attgtcatct cttccgaatt acctgaagtg
    11341 ctcggcctta gcgatcgtgt actggtgatg catgaaggga aactaaaagc caacctgata
    11401 aatcataacc tgactcagga gcaggtgatg gaagccgcat tgaggagcga acatcatgtc
    11461 gaaaagcaat ccgtctgaag tgaaattggc cgtaccgaca tccggtggct tttctgggct
    11521 gaaatcactg aatttgcagg tcttcgtgat gattgcagct atcatcgcaa tcatgctgtt
    11581 ctttacctgg accaccgatg gtgcctactt aagcgcccgt aacgtctcca acctgttacg
    11641 ccagaccgcg attaccggca tcctcgcggt aggaatggtg ttcgtcataa tttctgctga
    11701 aatcgacctt tccgtcggct caatgatggg gctattaggt ggcgtcgcgg cgatttgtga
    11761 cgtctggtta ggctggcctt tgccacttac catcattgtg acgttggttc tgggactgct
    11821 tctcggtgcc tggaacggat ggtgggtcgc gtaccgcaaa gtcccttcat ttattgtcac
    11881 cctcgcgggc atgttggcat ttcgcggcat actcattggc atcaccaacg gcacgactgt
    11941 atcccccacc agcgccgcga tgtcacaaat tgggcaaagc tatctccccg ccagtaccgg
    12001 cttcatcatt ggcgcgcttg gcttaatggc ttttgttggt tggcaatggc gcggaagaat
    12061 gcgccgtcag gctttgggtt tacagtctcc ggcctctacc gcagtagtcg gtcgccaggc
    12121 tttaaccgct atcatcgtat taggcgcaat ctggctgttg aatgattacc gtggcgttcc
    12181 cactcctgtt ctgctgctga cgttgctgtt actcggcgga atgtttatgg caacgcggac
    12241 ggcatttgga cgacgcattt atgccatcgg cggcaatctg gaagcagcac gtctctccgg
    12301 gattaacgtt gaacgcacca aacttgccgt gttcgcgatt aacggattaa tggtagccat
    12361 cgccggatta atccttagtt ctcgacttgg cgctggttca ccttctgcgg gaaatatcgc
    12421 cgaactggac gcaattgcag catgcgtgat tggcggcacc agcctggctg gcggtgtggg
    12481 aagcgttgcc ggagcagtaa tgggggcatt tatcatggct tcactggata acggcatgag
    12541 tatgatggat gtaccgacct tctggcagta tatcgttaaa ggtgcgattc tgttgctggc
    12601 agtatggatg gactccgcaa ccaaacgccg ttcatgattt tgattaaaat tttctcaaag
    12661 ccggttacgt attaccggtt ttgagttttt gcatgattca gcaggaaaag aaccatgttt
    12721 actaaacgtc accgcatcac attactgttc aatgccaata aagcctatga ccggcaggta
    12781 gtagaaggcg taggggaata tttacaggcg tcacaatcgg aatgggatat tttcattgaa
    12841 gaagatttcc gcgcccgcat tgataaaatc aaggactggt taggagatgg cgtcattgcc
    12901 gacttcgacg acaaacagat cgagcaagcg ctggctgatg tcgacgtccc cattgttggg
    12961 gttggcggct cgtatcacct tgcagaaagt tacccacccg ttcattacat tgccaccgat
    13021 aactatgcgc tggttgaaag cgcatttttg catttaaaag agaaaggcgt taaccgcttt
    13081 gctttttatg gtcttccgga atcaagcggc aaacgttggg ccactgagcg cgaatatgca
    13141 tttcgtcagc ttgtcgccga agaaaagtat cgcggagtgg tttatcaggg gttagaaacc
    13201 gcgccagaga actggcaaca cgcgcaaaat cggctggcag actggctaca aacgctacca
    13261 ccgcaaaccg ggattattgc cgttactgac gcccgagcgc ggcatattct gcaagtatgt
    13321 gaacatctac atattcccgt accggaaaaa ttatgcgtga ttggcatcga taacgaagaa
    13381 ctgacccgct atctgtcgcg tgtcgccctt tcttcggtcg ctcagggcgc gcggcaaatg
    13441 ggctatcagg cggcaaaact gttgcatcga ttattagata aagaagaaat gccgctacag
    13501 cgaattttgg tcccaccagt tcgcgtcatt gaacggcgct caacagatta tcgctcgctg
    13561 accgatcccg ccgttattca ggccatgcat tacattcgta atcacgcctg taaagggatt
    13621 aaagtggatc aggtactgga tgcggtcggg atctcgcgct ccaatcttga gaagcgtttt
    13681 aaagaagagg tgggtgaaac catccatgcc atgattcatg ccgagaagct ggagaaagcg
    13741 cgcagtctgc tgatttcaac caccttgtcg atcaatgaga tatcgcaaat gtgcggttat
    13801 ccatcgctgc aatatttcta ctctgttttt aaaaaagcat atgacacaac gccaaaagag
    13861 tatcgcgatg taaatagcga ggtcatgttg tagcgatgat gagaattgtc ggcgtcacat
    13921 cagggaactc agcacagcca cctgatgcga gcaaaagcct tatccgaccg acaaatcaga
    13981 taaggctcaa ggaaatgcaa ttacatatgc gccgcgatta accgttggtt atcctggtac
    14041 attgcgaaca ggtagttatt ataactcttc cctttggtcg agtagccctt cagcttgtga
    14101 atcatcgctg tggcagtcac ttcctgatcc gctttacgca gctgcgcacg cgatttacgg
    14161 aacgaagagt aagccgggtg cgtattcagg ttagtgacat aggcgctcac cgattctttg
    14221 acagaactaa actgtgagta ccctttcact ttacccggcg cattggtaca acgtcctttc
    14281 atgcatttca tgccgaacag attgttattg ttgcgcgcca gcttcgacgt tccccaaccg
    14341 ctttctgctg cagccatcgt cgccaccata ctggtaggga taatgtctac gcgttcaagc
    14401 aaggtattcc acgggatttt tcgcgtatta ccagaccact tcaccttgta gcgtttggcg
    14461 atgtctttca gacgcgcacg ctcagcaggt gaccattggc cctgatactg ttttgaaatc
    14521 agccagttac gttctgcagt aatggctgca ttttggctgg taatgtaagg cattacggtc
    14581 cggagaaacg cctttttcct tggtgttccg gaagggtatt ttcgcaaatc aggaagtgaa
    14641 ctactctttg cactattgcg agaatactct tgtttactgc ttacctgttt attactagct
    14701 ttagttaagt gggacttttg actcgctgtt gttgtgtgcg tcttcgctaa cacctcactc
    14761 gaaaacacca gagtgagtaa cataagaatc atcgccccat atcgtcgtat gggagtcaaa
    14821 atcatcaggt ctcctggtcg gatttaatca ttccaacacc ttatattttt cacaaatttg
    14881 agagttgaat ctcaaatcat atcaaaaata gctgtcaaga gcaccccaag gaatagtcca
    14941 aatctgaaac tatgtcacgt gttaacgatt cagattggcg ctaaatcgca gaaaatgtgg
    15001 ggtttatcgc aaaattcagc cgttttttgc gcgagatcgc tcacccttgc ttctcatcct
    15061 gtggacttac cgctcaggga tgagttttgt ctggcttatc gctggcaaac tgtctgaaat
    15121 cgcagcaata aggactcatc caccatgaaa ctcgccgcct gttttctgac actccttcct
    15181 ggcttcgccg ttgccgccag ctggacttct ccggggttcc ctgcctttag cgaacaggga
    15241 acgggaacat ttgtcagcca cgcgcagttg cccaaaggta cgcgtccact cacgctaaat
    15301 tttgaccaac agtgctggca gcctgcagat gcgataaaac tcaatcagat gctttccctg
    15361 caaccttgta gcaacacgcc gcctcaatgg cgattgttca gggacggcga atatacgctg
    15421 caaatagaca cccgctccgg tacgccaaca ttgatgattt ccattcagaa cgccgccgaa
    15481 ccggtagcaa gcctggtccg tgaatgcccg aaatgggatg gattaccgct cacagtggat
    15541 gtcagcgcca ctttcccgga aggagccgcc gtacgggatt attacagcca gcaaattgcg
    15601 atagtgaaga acggtcaaat aacgttacaa cccgctgcta ccagcaacgg tttactcctg
    15661 ctggaacggg cagaaactga cacatccgcc cctttcgact ggcataacgc cacggtttac
    15721 tttgtgctga cagatcgttt cgaaaacggc gatcccagta atgaccagag ttacggacgt
    15781 cataaagacg gtatgacgga aattggcact tttcacggcg gcgatttacg cggcctgacc
    15841 aacaaactgg attacctcca gcagttgggc gttaatgctt tatggataag cgccccattt
    15901 gagcaaattc acggctgggt cggcggcggt acaaaaggcg atttcccgca ttatgcctac
    15961 cacggttatt acacacagga ctggacgaat cttgatgcca atatgggcaa cgaagccgat
    16021 ctacggacgc tggttgatag cgcacatcag cgcggtattc gtattctctt tgatgtcgtg
    16081 atgaaccaca ccggctatgc cacgctggcg gatatgcagg agtatcagtt tggcgcgtta
    16141 tatctttctg gtgacgaagt gaaaaaaacg ctgggtgaac gctggagcga ctggaaacct
    16201 gccgccgggc aaacctggca tagctttaac gattacatta atttcagcga caaaacaggc
    16261 tgggataaat ggtggggaaa aaactggatc cgtaccgata tcggcgatta cgacaatcct
    16321 ggattcgacg atctcaccat gtcgctagcc tttttgccgg atatcaaaac cgaatcaact
    16381 accgcttctg gtctgccggt gttctataaa aacaaaacgg atacccacgc taaagccatc
    16441 gacggcttta cccctcgcga ttacttaacc cactggttaa gtcagtgggt ccgcgactat
    16501 gggattgatg gttttcgggt cgataccgcc aaacatgttg agttgcccgc ctggcagcaa
    16561 ctgaaaaccg aagccagcgc cgcgcttcgc gaatggaaaa aagctaaccc cgacaaagca
    16621 ttagatgaca aacctttctg gatgaccggt gaagcctggg gccacggcgt gatgcaaagt
    16681 gactactatc gccacggctt cgatgcgatg atcaatttcg attatcagga gcaggcggcg
    16741 aaagcagtcg attgtctggc gcagatggat acgacctggc agcaaatggc ggagaaattg
    16801 cagggtttca acgtgttgag ctacctctcg tcgcatgata cccgtctgtt ccgtgaaggg
    16861 ggcgacaaag cagcagagtt attactatta gcgccaggcg cggtacaaat cttttatggc
    16921 gatgaatcct cgcgtccgtt cggtcctaca ggttctgatc cgctgcaagg tacacgttcg
    16981 gatatgaact ggcaggatgt tagcggtaaa tctgccgcca acgtcgcgca ctggcagaaa
    17041 atcagccagt tccgcgcccg ccatcccgca attggcgcgg gcaaacaaac gacactttcg
    17101 ctgaagcagg gctacggctt tgttcgtgag catggcgacg ataaagtgct ggtcatctgg
    17161 gctgggcaac agtgactttt ccggcttccc gttcgtcagt acctcgggaa gccgccaacc
    17221 aggataaaat gtcagcccta atcagcgttg caggataaag caccgctcac tctccaacag
    17281 accgatttgc accccagcaa atgtagcgtt attgttacct tccttgctac agagttcgac
    17341 agatatcccg ctatgacatt ctcccttttt ggtgacaaat ttacccgcca ctccggcatt
    17401 acgctgctga tggaagatct gaacgacggt ttacgcacgc ctggcgcgat tatgctcggc
    17461 ggcggtaatc cggcgcagat cccggaaatg caggactact tccagacgct actgaccgac
    17521 atgctggaaa gtggcaaagc gactgatgca ctgtgcaatt acgacggtcc acaggggaaa
    17581 acggagctac tcacactgct tgccggaatg ctgcgcgaga agttgggttg ggatatcgaa
    17641 gcacagaata ttgcactaac aaacggcagc cagagcgcgt ttttctactt atttaatctg
    17701 tttgccggac gccgtgccga tggtcgggtc aaaaaagtgc tgttcccgct ggcaccggaa
    17761 tacattggct acgctgacgc cggactggaa gaagatctgt ttgtctctgc gcgtccgaat
    17821 attgaactgc tgccggaagg ccagtttaaa taccacgtcg attttgagca tctgcatatt
    17881 ggcgaagaaa ccgggatgat ttgcgtctcc cggccgacga atccaacagg caatgtgatt
    17941 actgacgaag agttgctgaa gcttgacgcg ctggcgaatc aacacggcat tccgctggtg
    18001 attgataacg cttatggcgt cccgttcccg ggtatcatct tcagtgaagc gcgcccgcta
    18061 tggaatccga atatcgtgct gtgcatgagt ctttccaagc tggggctgcc tggctcccgc
    18121 tgcggcatta tcatcgccaa tgaaaaaatc atcactgcca tcaccaatat gaacggcatt
    18181 atcagcctgg cacctggcgg tattggtccg gcgatgatgt gtgaaatgat taagcgtaac
    18241 gatctgctgc gcctgtctga aacagtcatc aaaccgtttt actaccagcg tgttcaggaa
    18301 actatcgcca tcattcgccg ctatttaccg gaagatcgct gcctaattca taaaccagaa
    18361 ggagccattt tcctctggct atggtttaag gatttgccca ttacgaccga gcaactctac
    18421 cagcgcctga aagcacgcgg cgtgctgatg gtgccggggc acaacttctt cccagggctg
    18481 gataaaccgt ggccgcatac gcatcaatgt atgcgcatga actacgtacc agagccggag
    18541 aaaattgagg cgggggtgaa gattctggcg gaagagatag aaagagcctg ggctgaaagt
    18601 cactaaaaat tgcctgatgc gctacgctta ttaggcctac atgatttctg caatatattg
    18661 aatttgcaag aatttgtggg ccggataagg cgtttacgcc gcatctggca taaacaaagc
    18721 gcactattcc ggcgttgaga aacgccggaa aaacgtttca aacaggctgc tgccgtagcc
    18781 gatgccgctg cactttctcg acatccatgc actgcaacgc ctttgtcggg caggcttcaa
    18841 cacaggccgg tcccgtctcc cgatgccagc acagatcgca cttaatcgcc ctcgcctttt
    18901 tgcgcgaaga aacgacctcc atcgcaccaa acgggcaagc cagcatacag cttttacagc
    18961 caatgcaacg tgtttgttca acgaaaatat gcccatgttc gcggcttatc gcgtcaacag
    19021 ggcagacatt cgcgcacggt gcatcttcac actgatgaca ggctactgcc gtggtccagc
    19081 tgtggtcttt aatgacacga atacgggaaa taaactcgtc tggtgacaac gcagcgcaat
    19141 cctgattctc ctgatgcgac actgcgcaag ccacttcaca ggtacggcaa ccgatacatt
    19201 tcgtcgcatc cgcaataata aaccggttca tgatcactcc tttgcactaa aacagcagag
    19261 tgccagagag cgcgtcccta ctgctttgat ccaacgaagg aaatgttaaa gttttggcac
    19321 ttgtccaaag cgttatgtga tcgcgccctg gtcgtccctg acagtaaatc ccagttcatt
    19381 agaaatagcc tgcgcggttt cacgcagtgg tttcaggaga tttttctccc ccacctgttt
    19441 cagacgtgat gtcgaaagcg aaatcgacac ggcgtacggc acccgcccat gaatattaaa
    19501 caccggaaca gcaatacagg agacgccgag ttcgttttct tctctgtcca tcgccgctcc
    19561 gctttcacga atgtgcgcca gttcgtcgaa catcgcgggc agctcggtaa tggtattgcg
    19621 ggttaacggc tggatctcat gctgatggtt ttcccagtat gacttcacgt agtccgggtg
    19681 accaaacgcc atgtagatct tgcccattgc ggaacagtag agcggcatat gctggccaat
    19741 ataggcacgg gttcgcagca tcccggttgt gggttccagc ttataaatca aaatagcgtg
    19801 atcgtcttcg cggctggaga agttaatggt ttcaccagtg gcgatgttca gtgcctcaag
    19861 atgcggagcg gcgatatgaa tgatattcag cgaagacagc gccttctgcc cgacggcaat
    19921 aaatttggta gtcaggcggt aactccctgc ggcgggcgcg gtggtcacat agccgcagga
    19981 ctgtaatccc tgcaataagc gatggacggt actcttattt aaaccagcca gctccgaaag
    20041 atgcgccaac ggacaaccgt ttggatagtt gctcaaaatc tcaatcagca tcaacccgcg
    20101 aaacagactc tggcttccgg ctggacgctc tttttcctgc gccatctcgt tctctttttt
    20161 tcccatcact tctttcccca ttttgtcgcg tcctgatggt agcgcaaagt gtgccgtagt
    20221 tcacgatctc gacagataat ttataaccac ttgattttta tgtcttttga aattcatcaa
    20281 tcagattgct ttgttaaaaa gtgatcgata tatttgaaat caagtttcgc atattgaaat
    20341 tttaagccaa aaaagcgatc aaaaaaacaa ggaagcctgg gatgaaagtg acatttgagc
    20401 agttaaaagc agcctttaat cgggtcttaa tttcacgcgg cgttgacagc gaaacggctg
    20461 acgcctgtgc agagatgttc gcccgcacca ccgaatccgg cgtttattct cacggcgtta
    20521 atcgtttccc tcgtttcatt caacaactgg aaaacggcga tatcattcct gatgcccaac
    20581 ccaaacgtat aaccagcctc ggcgcaattg aacagtggga tgcccagcgt tcgatcggca
    20641 acctgacggc gaaaaagatg atggatcgcg ccattgaact ggctgccgat cacggtattg
    20701 gtctggtggc acttcgtaat gccaaccact ggatgcgcgg cggcagctac ggctggcagg
    20761 cggcggaaaa aggctatatt ggcatttgct ggaccaactc catcgccgta atgccgccgt
    20821 ggggcgcaaa agagtgtcgc attggcacta acccgctgat cgtcgccatt ccttccacgc
    20881 cgatcaccat ggtcgatatg tcgatgtcga tgttctctta cggcatgtta gaagttaacc
    20941 gcctggcggg ccgtcagctc ccggtcgatg gtggctttga tgatgagggc aatttgacca
    21001 aagaacctgg cgttatcgag aagaatcgcc gcattttgcc gatgggctac tggaaaggtt
    21061 ctggcatgtc gattgtgctg gatatgatcg ctactctcct ttccgacggc gcatcggttg
    21121 ccgaagtcac ccaggacaac agcgacgaat acggcatttc acaaattttt attgccattg
    21181 aagtggacaa gcttatcgac ggtcccaccc gcgatgccaa gctgcaacgt atcatggatt
    21241 acgttactac cgctgaacgc gctgacgaaa accaggccat ccgcttaccc ggccacgaat
    21301 ttactaccct gctggccgaa aaccgccgta acggtattac cgttgatgac agcgtgtggg
    21361 ccaaaatcca ggcgttataa ggagataagt catgattttt ggacatatcg cgcagcccaa
    21421 tccgtgccgt ttgcccgccg ccattgaaaa ggcgctcgat tttctgcgcg ctaccgattt
    21481 caacgccctg gagccgggcg ttgtcgaaat cgacggcaaa aatatttatg cgcaaattat
    21541 cgatttaacc acacgcgaag cggtggaaaa ccgtccggaa gtgcatcgtc ggtatatcga
    21601 tattcagttt ctggcgtggg gtgaagagaa aatcggcatt gctattgata cgggaaataa
    21661 taaagtcagc gaatcactat tagagcagcg cgatattatt ttttatcatg acagtgaaca
    21721 tgaatcattt atagaaatga taccgggcag ctacgcaatt ttctttccgc aggatgttca
    21781 ccgaccaggt tgtattttgc aaacagcctc tgagatacga aaaattgtgg ttaaagtcgc
    21841 attaacggcg ctgaattaat cgaataatcg tctacgccag aacgactggg taatgttatt
    21901 gctctaacta tattaataat ttaggttgct gcacatgcaa cttgaattat gacagacata
    21961 gcctcaagga atagctatga aaaaaatact tgaagcaata ctggcgatta atctcgccgt
    22021 ac
//
LOCUS       DAPGWB010000073        21467 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.073, whole genome shotgun sequence.
ACCESSION   DAPGWB010000073 DAPGWB010000000
VERSION     DAPGWB010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 21467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21467
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.073"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..315
                     /locus_tag="RHX79_002624"
     CDS             <1..315
                     /locus_tag="RHX79_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2197779.1"
                     /translation="EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN
                     TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVSL
                     AG"
     gene            complement(358..1509)
                     /locus_tag="RHX79_002625"
     CDS             complement(358..1509)
                     /locus_tag="RHX79_002625"
                     /EC_number="1.3.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310429.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HDV2197780.1"
                     /translation="MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMR
                     ALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSA
                     EQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAK
                     EYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEV
                     EESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGH
                     NQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAI
                     QIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK"
     gene            complement(1523..3118)
                     /locus_tag="RHX79_002626"
     CDS             complement(1523..3118)
                     /locus_tag="RHX79_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HDV2197781.1"
                     /translation="MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEAT
                     TLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRI
                     SELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKE
                     DLIKLVEFDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNN
                     GGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPDQSQLYGGAPVNRFISGDFTLD
                     DSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVGIADGIGLVAREEGCADDFILTVET
                     GPIGGITSQGIAFGANVNTRAILDMTSQFDFYHGGGLDVCYLSFAEVDQHGNVGVHKF
                     NGKIMGTGGFIDISATSKKIIFCGTLTAGSLKTEIADGKLHIVQEGRVNKFIRELPEI
                     TFSGKIALERGLDVRYITERAVFTLKEDGLHLIEIAPGVDLQKDILDKMDFTPVISPE
                     LKLMDERLFIDAAMGFVLPEAAH"
     gene            complement(3262..4020)
                     /gene="aroD"
                     /locus_tag="RHX79_002627"
     CDS             complement(3262..4020)
                     /gene="aroD"
                     /locus_tag="RHX79_002627"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HDV2197782.1"
                     /translation="MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDI
                     LEWRVDHFADHSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNR
                     AAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
                     MQSFDADIPKIALMPQSTSDVLTLLTATLEMQEQYADRPIITMSMAKTGVISRLAGEV
                     FGSAATFGAVKKASAPGQISVNDLRTVLTILHQA"
     gene            complement(4051..4917)
                     /gene="ydiB"
                     /locus_tag="RHX79_002628"
     CDS             complement(4051..4917)
                     /gene="ydiB"
                     /locus_tag="RHX79_002628"
                     /EC_number="1.1.1.282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinate/shikimate dehydrogenase"
                     /protein_id="HDV2197783.1"
                     /translation="MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEV
                     DNDSFPGAIEGLKALKMRGTGISMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLR
                     GYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEF
                     FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVN
                     DISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFP
                     LEYVKQVMGFGA"
     gene            complement(4929..6194)
                     /locus_tag="RHX79_002629"
     CDS             complement(4929..6194)
                     /locus_tag="RHX79_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310425.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2197784.1"
                     /translation="MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMSSLAEKFS
                     TDNAGIAYLISGIGLGRLISILFFGVISDKFGRRAVILMAVIMYLLFFFGIPACPNLT
                     LAYGLAVCVGIANSALDTGGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYML
                     LNNIWYGYGLIIPGILFVLITLMLLKSKFPSQLVDASVANELPQMNSKPLVWLEGVSS
                     VLFGVAAFSTFYVIVVWMPKYAMAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKM
                     VRPIWANVFNSALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFP
                     KSKAKVTSIYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIRY
                     YRVFIIPENDVRFGERKFSTRLNTIKHRG"
     gene            complement(6421..7635)
                     /locus_tag="RHX79_002630"
     CDS             complement(6421..7635)
                     /locus_tag="RHX79_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2197785.1"
                     /translation="MKNPYYPTALGLYFNYLVHGMGVILMSLNMASLETLWQTNAAGV
                     SIVISSLGIGRLSVLLFAGLLSDRFGRRPFIMLGMCCYMAFFFGILHTNNIIIAYVFG
                     FLAGMANSFLDAGTYPSLMEAFPRSPGTANILIKAFVSSGQFLLPLIISLLVWAELWF
                     GWSFMIAAGIMFINALFLYRCTFPPHPGHRLPVIKKTTSSTEHRCSIIDLASYTLYGY
                     ISMATFYLVSQWLAQYGQFVAGMSYTMSIKLLSIYTVGSLLCVFITAPLIRNTVRPTT
                     LLMLYTFISFIALFTVCLHPTFYVVIIFAFVIGFTSAGGVVQIGLTLMAERFPYAKGK
                     ATGIYYSAGSIATFTIPLITAHLSQRSIADIMWFDTAIAAIGFLLALFIGLRSRKKTR
                     HHSLKENVAPGG"
     gene            complement(7735..8091)
                     /locus_tag="RHX79_002631"
     CDS             complement(7735..8091)
                     /locus_tag="RHX79_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416204.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiL family protein"
                     /protein_id="HDV2197786.1"
                     /translation="MNAYELQALRHIFAMTIDECATWIAQTGDSESWRQWENGKCAIP
                     DRVVEQLLAMRQQRKKHLHAIIEKINNRIGNNTMRFFPDLTAFQRVYPDGNFIDWKIY
                     QSVAAELYAHDLERLC"
     gene            complement(8227..8334)
                     /gene="rprA"
                     /locus_tag="RHX79_002632"
     ncRNA           complement(8227..8334)
                     /ncRNA_class="antisense_RNA"
                     /gene="rprA"
                     /locus_tag="RHX79_002632"
                     /product="antisense sRNA RprA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00034"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00034"
     gene            complement(8520..9632)
                     /gene="ydiK"
                     /locus_tag="RHX79_002633"
     CDS             complement(8520..9632)
                     /gene="ydiK"
                     /locus_tag="RHX79_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter YdiK"
                     /protein_id="HDV2197787.1"
                     /translation="MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTV
                     VIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISS
                     GDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHI
                     GRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGV
                     VVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTT
                     WGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLL
                     AVSWRLFAAWVEEVPPPTDQPEEILEELGEIEKPNK"
     gene            10021..13077
                     /locus_tag="RHX79_002634"
     CDS             10021..13077
                     /locus_tag="RHX79_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDV2197788.1"
                     /translation="MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTD
                     NSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVD
                     MSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINT
                     DASGQGSLVYGKTSDHVLGVRAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVY
                     QRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARL
                     DITPLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVS
                     ELITDVPDKEMLGLNIVEFAGDDEALIDERVNALCVRLDELIASQQAGVIGWQVCREL
                     AGVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSY
                     GMFGHVDAGVLHVRPALDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEY
                     SPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQIPI
                     AVRQQWRGVMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADR
                     GVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTQ
                     CPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVR
                     KLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLEALNAEQKARTVLVVQDPFTS
                     YYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAK
                     LGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESQPVATVSGESWY
                     FFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHKNSLGIYE
                     LSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK"
     gene            13074..13484
                     /gene="menI"
                     /locus_tag="RHX79_002635"
     CDS             13074..13484
                     /gene="menI"
                     /locus_tag="RHX79_002635"
                     /EC_number="3.1.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA hydrolase"
                     /protein_id="HDV2197789.1"
                     /translation="MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDS
                     RTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGVC
                     KPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL"
     gene            13584..13772
                     /locus_tag="RHX79_002636"
     CDS             13584..13772
                     /locus_tag="RHX79_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416200.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiH family protein"
                     /protein_id="HDV2197790.1"
                     /translation="MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTL
                     SSAELKEEIYFAWRLGVH"
     gene            14320..14688
                     /gene="sufA"
                     /locus_tag="RHX79_002637"
     CDS             14320..14688
                     /gene="sufA"
                     /locus_tag="RHX79_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold SufA"
                     /protein_id="HDV2197791.1"
                     /translation="MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLG
                     VKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQI
                     FKFHNPKAQNECGCGESFGV"
     gene            14697..16184
                     /gene="sufB"
                     /locus_tag="RHX79_002638"
     CDS             14697..16184
                     /gene="sufB"
                     /locus_tag="RHX79_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416198.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HDV2197792.1"
                     /translation="MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVR
                     AISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDT
                     CASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
                     EQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP
                     MELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKN
                     AEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL
                     RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKI
                     MPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ
                     RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG"
     gene            16194..16940
                     /gene="sufC"
                     /locus_tag="RHX79_002639"
     CDS             16194..16940
                     /gene="sufC"
                     /locus_tag="RHX79_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HDV2197793.1"
                     /translation="MLSIKDLHVSVEDKAILRGLSLDVRPGEVHAIMGPNGSGKSTLS
                     ATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTA
                     LNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA
                     VLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHV
                     LYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ"
     gene            16915..18186
                     /gene="sufD"
                     /locus_tag="RHX79_002640"
     CDS             16915..18186
                     /gene="sufD"
                     /locus_tag="RHX79_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HDV2197794.1"
                     /translation="MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTR
                     KHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSDATE
                     GSGYEVSINDDRQGVPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQG
                     VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAQLQHIKL
                     AFENPVSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP
                     VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNN
                     LLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYA
                     FAAELTEALRDEGLKQQVLARIGQRLPGGAR"
     gene            18183..19403
                     /gene="sufS"
                     /locus_tag="RHX79_002641"
     CDS             18183..19403
                     /gene="sufS"
                     /locus_tag="RHX79_002641"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase SufS"
                     /protein_id="HDV2197795.1"
                     /translation="MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDSEA
                     EFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVA
                     NSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPNL
                     FDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCD
                     FYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEA
                     GTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPRNRLGV
                     IAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVD
                     RLVTGLQRIHRLLG"
     gene            19416..19832
                     /gene="sufE"
                     /locus_tag="RHX79_002642"
     CDS             19416..19832
                     /gene="sufE"
                     /locus_tag="RHX79_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfuration protein SufE"
                     /protein_id="HDV2197796.1"
                     /translation="MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRAEDRSP
                     QNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDV
                     RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS"
     gene            19981..20985
                     /gene="ldtE"
                     /locus_tag="RHX79_002643"
     CDS             19981..20985
                     /gene="ldtE"
                     /locus_tag="RHX79_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtE"
                     /protein_id="HDV2197797.1"
                     /translation="MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTV
                     QEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNL
                     AELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
                     GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIK
                     ALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQ
                     FKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ
                     "
     gene            complement(21049..21285)
                     /gene="lpp"
                     /locus_tag="RHX79_002644"
     CDS             complement(21049..21285)
                     /gene="lpp"
                     /locus_tag="RHX79_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein lipoprotein Lpp"
                     /protein_id="HDV2197798.1"
                     /translation="MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL
                     SNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK"
BASE COUNT         5588 a         5233 c         5427 g         5219 t
ORIGIN      
        1 gaacagttat cgaaaaaatt tcgtgccagc gtcagttata tttgccatga atttaccaaa
       61 gagtatcgta tttcccctat taactatgtt attcaacggc gtatgacgga agcgaaatgg
      121 tcactcacta atactgaatt atcacaggca gagatctcct ggcgtgtggg ttatgaaaat
      181 gtcgatcact ttgccaaact gtttttgcgc catgtcggtt gttcgcccag cgattaccgc
      241 aggcaattta aaaactgttt tgcggaacaa gaaatcctat ctgaatttcc tcaaccggta
      301 agtcttgccg ggtaaatctg gcggcgcagt ttgttaagaa gctgcgccgc ctgcagatta
      361 tttgttctga taatctttca ggatctgccg acccgcaacg taaatcataa tttcgtctgt
      421 accgccgccg atacgttcac aacggacatc acgccagaag cgggagacgc gcgcctcatc
      481 ggtatagccc agaccgccca tgatttgaat cgcatcatca atgacttcca ttgcggtacg
      541 tgcacagtac agttttgcca gcgccgcgct ggtgcgcagt gactgatgct gatcggcttg
      601 ccatgccact ttcagcacca tgttgcgcat gttgtcgatc ttaatcgcca tcagcgccag
      661 tttttcctgg atcatctggt tatgaccaat gggcttacca aaagcgatac gttggttggc
      721 atagcgggcg gcatcttcaa aggcgcattc ggcaaagccg gtgctgcgcg cggcgttgat
      781 caggcgctcc atctcaaagt tgtacatcac attgaggaaa cccattcctt cttcgcccac
      841 catgtcgctc tcttcaacct ccacgttgtc gagatagact tcgcaggtgc tgagcatatg
      901 ccagccgatt ttatgcagcg ggttaatctt aatgccgggc ttactggagt cgacccacca
      961 cagggtgaag gcttttttgg gatctttcgg ttgcggatcg cgcgccaaca ccagcatata
     1021 cgggtactct ttcgcaccgg taataaaggt tttttgtccg ttgatgtaga ccttgccgtt
     1081 tttacgcgtg taagtggtag tggcactgtt gttatctgag ccagcacctg gttccgtcaa
     1141 cgccagggca taggcgggat cacccgtttc cagggtgctt tctgccgttt tacgtagctg
     1201 ctctgcagaa ccgaaacggc gcatactgtg aatacattga ccgttggtga tcaaaaatgc
     1261 cggagcaccg cattttgaca cttccatcag cgccagcatt tgggtgacgt aatccgcagg
     1321 gataccacca aattcttccg gcacgccaag catggaaata ccgttatccg ccagcgcccg
     1381 cataaactca cgcggatatg tcccgttttg atcgcaggtg cggaaatact cttccggaaa
     1441 gttagtcgta atcagttcgc gaatactggc cagcagcagt tcttgttctt cagttaaaga
     1501 aaaatccatc attatactcc tgttaatgag ccgcttcagg caggacaaaa cccatcgccg
     1561 catcgataaa taatctttcg tccatcagtt tgagttctgg cgaaatcact ggggtgaagt
     1621 ccattttgtc gagaatatct ttttgtaaat cgacgccagg ggcgatttcg attaaatgca
     1681 ggccgtcttc tttcagcgtg aatacagcac gttcggtgat gtaacgaaca tccagtcccc
     1741 gttcgagcgc gatttttccg ctaaaagtaa tttccggtag ttcccgaata aatttattta
     1801 cccgtccttc ctggacgata tgcaatttgc catcggcaat ttctgttttt aaactgcccg
     1861 cagttaacgt gccgcagaaa ataattttct tcgaggtggc actgatatca ataaatccac
     1921 cggtacccat gattttgcca ttgaatttat gcacgccgac gttaccgtgc tggtcgactt
     1981 cagcaaaact caaataacaa acatccagac caccaccgtg ataaaaatca aactgggacg
     2041 tcatatccag aatggcgcgg gtattcacgt tcgcgccaaa ggcgataccc tgtgaagtaa
     2101 ttccgccaat cggacctgtt tctaccgtca gaataaagtc atcagcacaa ccttcttccc
     2161 gggcgaccag gccaataccg tcagcaatac cgacgccgac attccccacc gcgcctttac
     2221 gcatttcgaa taatgcacgc cgcgcaacta atttacgttg gtttaggggc aggctaagtt
     2281 tggtgctgtc atcaagggtg aagtcaccag aaataaaacg gttaaccggc gcaccgccat
     2341 acagttggct ttgatccgga tcgaccacca caatatccac cagataaccc ggaatacgga
     2401 cagatttagg atgcagcgtg gctttcttaa ccattttctg cacctgcatc atcacaatac
     2461 cgccgttatt gtgcaccgcc tgggcaataa ccaatgcgtc gagatacatc acctcatctt
     2521 caaaagtggc gtagccttca ctgtcgcagg tggtagcgcg aatgaaggcg atatctggcg
     2581 caatcgcttt gtaatagaga tattctttgt tatcaaactc gaccagttta atcaggtctt
     2641 ctttcgtgac ttcattcagt ttgccgcctt gctggcgtgg atcgacaaat gtcccgatgc
     2701 caatatcact aataatacca ggctggtggg ctgcggcggc gcgtaaggtt tgtgtaagta
     2761 caccttgtgg atagttataa gcaataattt tattttgttc tgcgagttca gaaatacgcg
     2821 gcgattgtcc ccagtgacca cataatgccc atttcaccag accttcttgc gccagaggac
     2881 taataccacg gtcggcgcga tcgccaagcc ctgtcggact aataatcgat aaattacgtg
     2941 gcgtttgagt ctgtttatat ttatcagcaa gagctgtaat taacgtggtg gcttccagaa
     3001 taccgccgcc agcgcctaac acacaaagtg ttgcttcgtc gggaatataa ttcaccgctt
     3061 cctgtgccga caggaccggc actcgtccat taatacgagg tggttttaca ggtttcattg
     3121 ttaattcctg attcagatgt gattttccct acgccagatg gagaattagc gcacagagac
     3181 tcacgaaata tttttattaa atacggttaa atatattttt taagttcggc ggggagggtg
     3241 ttcccgccga aatattattg cttatgcctg gtgtaaaata gttaataccg tgcgtaaatc
     3301 atttaccgag atttgccctg gtgcagaggc tttttttacc gcaccaaaag ttgccgccga
     3361 gccaaatact tcaccagcca gacgagaaat tacgccagtt tttgccatcg acatcgtgat
     3421 gattggacga tcggcatact gctcctgcat ctccagggtc gcggtaagca acgtcagcac
     3481 atcgctggta ctttgcggca tcagcgcaat cttaggaata tcggcgtcga aggactgcat
     3541 tttgcgcaga cgggcaatga tttcttcggc ttccggcgtt ttatggaagt catggttgga
     3601 catgacaact ttcacatcat gcgcgtgggc gtaggcgacg gtttctttaa cctgatcatc
     3661 gccggtaaat aactccagat cgatcatatc aaccaggccg ctgtcgatgg ctgcacgatt
     3721 gagagcaata taagcctcgg tggaaatcgc ctgctcgccg ccttctttgg cactgcggaa
     3781 ggtaaacagc agcggttttt ctggcatggt ttcacggaga atttttgccg ccgccatgac
     3841 agactccaca ttggagtggt cggcaaagtg gtccacacgc cattccagaa tatcaaagtc
     3901 cgcttcacga taggcgagag cttcggattt cacgcgggcg atatctttcg ccatcagcga
     3961 gacgatgatt ttaggtgcgc ccgtaccaat gacgagatct tttacagtta cggttttcat
     4021 tttttaccct ttctgcacgc ggtcagcctg tcaggcaccg aaccccatga cctgtttaac
     4081 atattccaga gggaaatctt tgccagtcca taacgtgaac tgttcagccc cttgccacaa
     4141 caacatgccg tatccatcaa tcgttttgca accagcttgt tgcgcctgct gcaataactt
     4201 cgtcatatgc gggttataca cgcattcagt gaccagcagt cccggatgta acagactgat
     4261 atcattaact aatgattcat tctcaagggg tttcataccc acttttgtgc cattggttaa
     4321 aatgtcggcg gaagccaggg cttcagcaaa ggcttgctga tcggcgagat cggtaaccgt
     4381 gacgacacaa tcggtgtttt cgttaacccg ctgcgcgaag gcgagggctt tatcgaagaa
     4441 ctcatcccga cggttaaaga gtttaatttc ttttaaacct tcaattgccc cctgcgcgcc
     4501 aatcgccgtt gaggcacctc cggcccctaa cagcaccatt gttttgcctt tgatatcaaa
     4561 accgctctct ttaatggcgc gaatatggcc cgtgccgtcg gtgttatagc cgcgcaggta
     4621 gccatcatca ttaacgatgg tgttgatggc acccaccagt ttggctgctg gcgttaattc
     4681 atcaacatat tcacacgcca gttgtttgtt cggcattgat ataccagttc cgcgcatttt
     4741 gagggctttt aatccttcaa ttgctccggg aaaactatcg ttatccactt caaaggccat
     4801 ataggtaaat ggcaatcccg ctttttctaa ggctttattc tgcatttcag gcgataaact
     4861 gtggcggata ggataggcca tcagcccaat caattcgtat tttgcggtaa catccataat
     4921 taactccttt aacctctatg cttaattgtg tttaaccggg tgctaaattt acgctcgcca
     4981 aaccgcacat cattctcagg aataataaaa acgcggtaat agcggataaa aacaataatt
     5041 gcggtaatca gggccagcag cgcgaaagta aaatcgagaa caatgatata ttgaaggccg
     5101 atgttcgaca gataaccggt aatcagcgga ataacaaagt tagccagtcc acccatcatc
     5161 atataaatac tggtgacttt ggctttgctt tttgggaaaa actctgacat gaccgaaaca
     5221 ccgagctgta aaatgccgcc agctgctgag aaaccgataa caaaggcgcc ggcattacac
     5281 accagtggag aagggtacag gtagataatg gctgctgtta ttgttgccag tgcagagtta
     5341 aatacattag cccagatggg ccggaccatt tttttcagta gtgcggcaaa aataaagaca
     5401 cagaccaacg agcccatact gtaataagag atggttttta atgcctcagc ttctgacata
     5461 ccagcaaaag ccatcgcata tttgggcatc cacaccacaa tcacataaaa ggtcgagaat
     5521 gcggctacac cgaacagtac cgatgaaaca ccttccagcc agactaacgg tttgctgttc
     5581 atttgcggta attcattagc tacgctggcg tccaccaact ggctggggaa tttgcttttc
     5641 aacagcatca gcgtgatcag tacaaacaga atacccggaa taatcagccc atagccgtac
     5701 cagatattat tgagcaacat atagctcacc agcattgggt agaacatttg cccaaatgac
     5761 accatcgctt taaccagtat gaccgccgaa ccagaggctt tcggaaagca ttccatgagc
     5821 gcggggtagc cacccgtatc cagcgctgag ttagcgatac ctacgcacac tgccagaccg
     5881 taggcaagag ttaaattcgg gcaagcggga ataccaaaga agaatagcag atacattatt
     5941 actgccatta atatcaccgc ccgacgacca aacttatcgg agatcacacc gaagaataaa
     6001 atactgatca atcgccccaa accaataccg gaaattaagt aggcaatgcc cgcgttgtca
     6061 gtggaaaact tttccgccag agatgacatg ttttgggcaa gcgtaataac actaatgccg
     6121 tgcaggaagt agctgaagta aatacaaaga acagccagga taaatggcgt gctgaaagcc
     6181 ttattttgag acattttcac agctccttgc tgaaagataa tttcgttacc gtacgtattg
     6241 ttcttcgacg gtttacataa ttactatact gaagatgatt ttccctgggt acatggcata
     6301 aagtttatgt ttccaggaat attgcatgtc atagtttgtt tttgatcgcg attttcctta
     6361 gttagcgcag aaagagttat ttatccgtaa gatcttgcat gacctgaaaa gaatattgca
     6421 ttacccaccc ggagcgacat tttcctttag cgagtgatgc cgcgtttttt tgcggctgcg
     6481 taagccgata aacagtgcca gtaaaaaacc gatggcagcg atggcggtat cgaaccacat
     6541 aatatcggca atacttcttt gggacagatg agccgtaatc aacggaatag taaaggtcgc
     6601 aatactgccc gcactgtaat agatccctgt agctttacct ttagcgtaag ggaaacgttc
     6661 agccattaac gtcaggccaa tttgcacaac acctccagca gaggtaaaac caatgacaaa
     6721 agcaaatatt atcaccacat aaaatgtggg atgcaggcag acggtaaaca gagcaataaa
     6781 tgagataaag gtgtacagca tcagtaatgt tgttgggcga acggtattac gaatgagtgg
     6841 agcggtaata aatacacaaa gcagcgaacc cacggtgtag atactgagta gtttaatcga
     6901 catagtgtat gacatgcctg caacaaattg tccgtactgt gccagccact ggctaaccag
     6961 ataaaacgtt gccattgaga tatagccata taaggtataa ctggctaaat cgataattga
     7021 acagcgatgt tccgtagagc tggtggtttt ctttatgaca ggtaagcgat gacccggatg
     7081 gggtgggaac gtacaacggt ataaaaacag agcgttaata aacataatgc ctgcagcaat
     7141 cataaaggac caaccgaacc acagttcagc ccacactaac aggctaatga ttagcggtaa
     7201 taaaaattgt ccgctggaaa caaatgcttt aattaaaata ttggctgtcc caggtgagcg
     7261 tggaaaagct tccatcaaac tgggataagt gcctgcatcg agaaaactgt ttgccattcc
     7321 tgccagaaag ccaaaaacat aagcgataat gatgttattg gtgtgcagga tgccaaaaaa
     7381 gaaggccata tagcagcaca tcccgagcat gataaaaggg cggcgaccaa agcgatcgga
     7441 taataatcct gcaaaaagca agacacttaa tcgaccaatg cccagcgatg agataactat
     7501 cgagacaccc gcggcattag tctgccaaag tgtctccagc gaggccatat tcaggctcat
     7561 caaaatgacg cccataccat gcaccaggta attaaaatac aacccaagtg cggtagggta
     7621 atagggattt ttcataggtt ctacttagca aaggtgcttt aaaaagtgta gcgatgttgt
     7681 gtcagtatcc attcattatt gttgtaacaa cgacaattcc tttctgtgga aaaattagca
     7741 aagccgctcc agatcgtgtg catataattc agcggctacc gattgataga tcttccagtc
     7801 aataaaattg ccatcagggt agactcgttg aaatgcggtt aagtcgggga aaaaacgcat
     7861 ggtgttgttg ccgatgcggt tatttatttt ctctatgatg gcatgaagat gtttttttct
     7921 ttgctgacgc atagccaaca gttgctcgac tacacgatca ggaatggcac acttgccatt
     7981 ttcccattga cgccagcttt cactgtcacc ggtctgggca atccaggtcg cgcattcatc
     8041 aatagtcatg gcaaaaatat ggcggagtgc ctggagttca taagcgttca tcgtgtaatg
     8101 gctgcatgaa ataaacaata aaatataaat aacattatca gcctgctgac ggcttgaaga
     8161 gagtcacagt atcttgtgca acattattgg aaagagtgag gggcgaggta gcgaagcgga
     8221 aaaatgttaa aaaaaagccc atcgtgggag atgggcaaag actacacaca gcaattcgtt
     8281 gtttcactca ggggatttcc atgcttataa atcaatatgt tgatttataa ccgtgagcta
     8341 atagtaggca tacggacttt ttgcgtcgat cagattcgtc tcattagttt aaaaactgta
     8401 aagaatttgc gacaggtact accagctgaa tggcggtaag caggaaaata tggggaagag
     8461 caagcaaata tcaattagcg gtggttaaca atcaggcggc agagccgcct gatgagaaat
     8521 tacttattcg gtttctcgat ttcgccaagt tcttcgagaa tttcttccgg ttggtccgtc
     8581 ggcggcggga cttcttccac ccacgcggca aacagacgcc aggaaacggc taacagaacc
     8641 ggaccaataa acagaccgat catcccgaaa gcaatcaaac caccaataac gccagagagg
     8701 atcaggatca gcggtaaatc ggcacccatg cgaattaaca ttgggcggat gacgttatcc
     8761 agcgtgccaa ccacaccgct ccacactaac aataccgttc cccaggtggt atcgccggtc
     8821 cagtagagcc agataatcgc cggaatcagt accggcaacg ggccaagctg gacaaggcag
     8881 gagaggatca ttaacaccgt tagcaacgtt gcataaggta cgccggatac ggcgaggccg
     8941 ataccgccaa gcactgcctg tactaacgcc gtcaccacca cacccagcgc caccgcgcgg
     9001 atagcctgtg ccgccagcag cacggcggca tctccgcgaa cgcctgccag acgggttgca
     9061 aaatggcgaa tgccttgtgc cacctgttca ccgcgccagt acagcagggc actgaagaga
     9121 agcatcagcg cacaatgcac cataaagcgc ccgatatgcg ccgcctgccc aacgaaccag
     9181 gtggtggtgg tgccaatata agggcggact ttcgccatga tcgccgtccc ccccatatcc
     9241 agcaagttgt gccagcctgc atacagcttc gcgccaatca ccggaatggt attaagccac
     9301 gccagatcgg gtaacgtcat gtcgccgctg gaaatggctt taattagcgg gccgctgccg
     9361 tcgacgatac tgttaaccag caaagcaata gggatgataa acaccatcac taataacagc
     9421 gtcatcacca gaacggcgag agagcggcgg ccaaacatga tcttttgcaa acgtaacaat
     9481 accggccagg tggcgataac caccgtaccg gcccatgcaa agccgagaat aaagggttga
     9541 acaatccaca gacatgccac aatcatgatg gctaaaaaca gcaccgaaag cagaatttgt
     9601 gcgacatccc tgggctgacg aacatttacc ataactactt ttcacctttt ttgtgcgtca
     9661 aatcgtcgac gcgacgtgaa cacgcgaaac tcacctgcat aatgatgagc aatttcagcg
     9721 gtttttaaca ggccgattct gcccttaatt ctgatgggcg tgttagaaaa aaatgtggta
     9781 caacaactca ggcaacacgc aaacgattta ctcgtcgtat ttcaagttgc atgtgctgcg
     9841 gctacgttcg ttcaccccag tcacttacta ttgtaagctc ctggagttca ctcgcttgcc
     9901 gccttcctgc aactcgaaat ccatagagta aataaacatc acctttcagt gcgctattgc
     9961 agccgcctga aagaatagtg tatcgaccta catcacagac cgcaggaaag ggtcaatata
    10021 atgattccac agatttccca ggcacccggc gtcgttcaac tggtgcttaa ttttttgcaa
    10081 gagctggagc aacaaggttt taccggcgat acggcgacaa gttatgccga tcgtctgaca
    10141 atgtcgaccg acaacagtat ttaccaactt ctccccgatg cggtggtatt tccgcgttca
    10201 accgcagatg tggcgctgat cgcccgtctt gccgcgcagg aacgctattc atcgctgatc
    10261 tttacccccc gcggcggcgg caccggcact aacggtcagg cgctcaacca ggggattatt
    10321 gttgatatgt cccgccatat gaaccgcatc atcgaaatta accctgaaga gggctgggtg
    10381 cgcgttgagg ccggggtgat aaaagatcaa ctcaatcagt acctgaaacc gttcggctac
    10441 ttttttgcgc cggaactttc gaccagcaac cgggcaacgc tcggtgggat gatcaatacc
    10501 gatgcatccg gtcagggatc gctggtctat ggcaaaacgt cggatcacgt acttggcgta
    10561 cgcgcggtgt tgttgggggg cgatattctc gatacgcaac ctttacccgt cgaactggcg
    10621 gaaacgctgg gtaaatccaa taccacaatc gggcgaattt ataacacggt ttatcaacgt
    10681 tgccgtcagc aacgccagtt aatcatcgac aacttcccca aacttaaccg ctttcttacc
    10741 ggttacgatc tgcgtcatgt ctttaacgat gagatgaccg agttcgacct gacgcgcatt
    10801 ctgacgggtt cagaagggac gctggccttt attaccgaag cgcggctgga tattacgccc
    10861 ttgcctaaag tgcgccgtct ggtgaacgtc aaatatgact cttttgactc cgcgctgcgt
    10921 aacgcgccgt ttatggttga ggcgcgggcg ctttcggtag agacggtgga ctcaaaagtg
    10981 ctgaatctgg cgcgggaaga tattgtctgg cattccgtca gcgagttgat taccgatgtg
    11041 cctgacaaag agatgctcgg gctgaacatt gtggagtttg ctggtgatga tgaggcgctg
    11101 attgacgagc gagttaatgc tctctgtgtg cggcttgatg agctgattgc cagccaacag
    11161 gcaggtgtga ttggctggca ggtgtgccgc gagctggcgg gtgttgaacg tatctatgcg
    11221 atgcgtaaaa aagccgttgg tctgcttggc aatgccaaag gtgccgctaa gccaattccg
    11281 tttgctgagg atacctgcgt accgccggaa catctggccg attatattgc tgaatttcgc
    11341 gcgctgctcg acagccacgg cttaagctac ggtatgttcg gtcacgtcga cgcaggtgtc
    11401 ttgcacgtcc gtccagcgct ggatatgtgc gatcctcaac aagagatttt gatgaagcaa
    11461 atctctgatg acgtagtggc gctgactgcg aaatacggtg gtttgttgtg gggcgagcac
    11521 ggcaaaggtt ttcgcgctga atacagcccg gcgtttttcg gtgaggaact ttttgcagaa
    11581 ctgcgcaaag tgaaagcggc atttgacccg cataaccgac tcaacccagg gaagatttgc
    11641 ccgccagaag gtctcgatgc gccgatgatg aaagtggacg cggtgaagcg cggtacattc
    11701 gatcggcaga tccccattgc ggtacgccag cagtggcgcg gtgtgatgga gtgtaacggc
    11761 aacggtttat gcttcaactt tgatgcccgt agtccgatgt gtccgtcgat gaagatcacc
    11821 cagaaccgga ttcattcacc gaaagggcgc gcaacgctgg tgcgtgaatg gctgcgtttg
    11881 ttggcggatc gcggcgttga tccactcaaa ctggaacaag aactgcctga atccggcgtc
    11941 agtttgcgga cgttaattgc ccgcacgcgc aatagctggc atgcgaataa aggcgaatat
    12001 gacttctcac acgaagtcaa agaggcgatg tcgggctgtc tggcctgtaa agcgtgttcg
    12061 acccagtgcc ccatcaaaat tgatgtgccg gagtttcgct ctcgttttct gcagctctat
    12121 cacacccgtt atttacgtcc gctgcgcgac cacctcgtcg ctacggtcga gagctacgcg
    12181 ccgctgatgg cacgtgcgcc gaaaaccttt aacttcttca ttaaccagcc gctggtgcgc
    12241 aaactctcgg aaaaacatat cggcatggtt gatttgccac tgctgtcggt cccctcgcta
    12301 caacaacaaa tggtggggca tcgctcggca aacatgacgc tggaacagct tgaagctctc
    12361 aatgcagagc agaaagcgcg cacggtgttg gtggtgcagg acccctttac cagctattac
    12421 gatgcgcaag tggtggcgga ttttgtccgt ctggtcgaaa aattaggttt ccagcctgtg
    12481 ttactgccat tttcaccaaa tggcaaagcc cagcatatca aaggctttct taatcgtttt
    12541 gcgaagacgg cgaaaaagac ggcggatttc ctcaaccgta tggcgaagct gggtatgcca
    12601 atggtaggcg tcgatccggc gctggtactt tgttatcgcg atgaatataa actggcactg
    12661 ggcgaggaac gtggcgagtt taacgtctta ctggcgaatg aatggctggc aagcgcactt
    12721 gagtcacagc cagtggctac agtcagcggt gaatcatggt atttctttgg tcactgtacc
    12781 gaagttaccg ccttgccggg tgcgccagca caatgggccg cgatatttgc ccgttttggc
    12841 gcgaaactgg aaaatgtcag cgtgggttgc tgcggcatgg cagggactta cggacatgaa
    12901 gcgaaaaacc ataaaaattc gctcgggatc tatgagttat cctggcatca ggctatgcag
    12961 cgactgccgc gtaaccgctg tctggcgacc ggatattcct gccgtagcca ggtaaaacgg
    13021 gttgaaggca cgggggtacg ccatcctgtg caggctttac tggagattat taaatgatat
    13081 ggaaacggaa aatcaccctg gaagcactga atgctatggg tgaaggaaac atggtggggt
    13141 tcctggatat tcgctttgaa catattggtg atgacaccct tgaagcgaca atgccagtag
    13201 actcgcggac aaagcagcct ttcgggttgc tgcatggagg agcatccgtg gtactggccg
    13261 aaagtatcgg ttccgttgcc ggttatttat gtaccgaagg tgagcaaaaa gtggttggtc
    13321 tggaaatcaa tgctaaccac gtccgctcgg cacgagaagg gcgggtgcgc ggggtatgca
    13381 aaccgttgca tctcggttcg cgtcaccagg tctggcagat tgaaatcttc gatgagaaag
    13441 ggcgtttgtg ctgttcgtca cgattgacga ccgccatttt gtgacgttgt caccagaaaa
    13501 gtgtgacgca tattgccttt ggtcattatc tgcacagtaa acggtggtat actgtgcagg
    13561 tcttgtctaa aagcgaggat gctatgtcta ctcaacttga tcccacccag ctggccattg
    13621 aatttttacg ccgtgaccag agcaatcttt cacctgccca atatctcaaa cgtctgaaac
    13681 aactagaact tgaatttgct gacctgctta ctctctcttc tgctgaatta aaagaagaaa
    13741 tctactttgc ctggcgtctg ggcgtgcatt gatcctgact taatgccgca agttcgccaa
    13801 atcgacctgg attaacctcc gtccaggttc gatgaccttc ttaatactgc ttatctaccg
    13861 cctgatattg ttcaaaaata atactaatcg cagtttgtgt taaaacggcg ggttagcttt
    13921 atgagattat tcttatcgcc ccttcaagag ctaagccact gagagtgccg gagataagcg
    13981 ccggatgggg tagaaaccct taagcctgtg ttgcacagac ttaagggttt tcttatttct
    14041 gaacgctgca cttttttacc tatctcttaa atagtcattt tcaatacaac tttttctttt
    14101 tcatcacagc cttaatgctc cttagataat aaccattatc taacaatgag atacctaatt
    14161 cttagcgtgc ctgttaaccc acacatcagg gtctatgctt attaaaagca ggcaaaaagc
    14221 atgttttacg gtaaagcccc tgcgtttgct gggttgaact gataatcatt atcactaaca
    14281 tgctgttata cgctgaaagc gatgaagtga ggtaaatcga tggatatgca ttcaggaacc
    14341 tttaacccac aagatttcgc ctggcaaggc ttaacgctga cacccgcagc ggcgatacac
    14401 atccgtgagc tggtggcaaa gcagccgggt atggtcggcg tgcgcttagg cgtgaagcaa
    14461 acgggctgcg cgggctttgg ctatgtgctc gacagtgtta gcgagccgga caaagacgat
    14521 ctgctgtttg aacacgacgg cgcgaagctg tttgtcccgc tgcaagcgat gccgtttatt
    14581 gatggcacgg aagtcgattt cgttcgtgaa ggacttaatc agatattcaa atttcacaac
    14641 cctaaagccc agaatgaatg tggctgtggc gaaagctttg gggtataggc ggtactatgt
    14701 ctcgtaatac tgaagcaact gacgatgtca aaacctggac cggcggcccg ctgaattata
    14761 aagaaggatt cttcacccag ttagccaccg atgagctggc aaaggggata aacgaagagg
    14821 tggtgcgcgc aatttcggcg aagcgtaatg agccggagtg gatgctggag tttcgtctaa
    14881 acgcctatcg cgcatggctg gagatggaag aaccgcactg gttgaaagcg cactacgaca
    14941 agctgaatta tcaggattac agctactact cagcaccatc gtgcggtaat tgtgacgaca
    15001 cttgcgcgtc tgaacctggc gcggtgcagc aaactggcgc gaacgccttt ttaagtaaag
    15061 aggtggaggc ggcgtttgag cagttgggcg ttcccgtgcg ggaaggcaaa gaggtggcgg
    15121 tggatgccat tttcgactct gtttcggttg ccactactta tcgcgaaaaa ctggcggagc
    15181 agggaattat tttctgttcc tttggtgagg cgatccacga tcacccggaa ctggtgcgta
    15241 aatatctcgg caccgtggtg ccggggaatg acaacttctt tgccgcgctt aatgcggcgg
    15301 tagcctctga cggtacgttt atttatgtgc ctaaaggcgt gcgctgcccg atggaacttt
    15361 ccacctattt tcgcattaac gcggaaaaaa ctgggcagtt tgagcgcacc attctggtgg
    15421 ccgacgaaga cagctacgtc agctacattg aaggctgttc cgctccggtg cgtgacagct
    15481 atcagttaca cgcggcagtg gtggaagtca tcatccataa aaacgccgag gtgaaatatt
    15541 ccacggtaca aaactggttc cctggcgata acaacaccgg cggtattctc aacttcgtca
    15601 ccaagcgtgc tttgtgcgaa ggcgaaaaca gcaaaatgtc atggacgcaa tcagaaaccg
    15661 ggtcagcgat tacgtggaaa tatcccagct gcattttgcg cggcgataac tccattggtg
    15721 agttttactc agtggcgctg accagcggtc atcagcaagc ggataccggc accaagatga
    15781 tccacatcgg taaaaacacc aaatcgacca ttatctcgaa agggatctct gccggacata
    15841 gtcagaacag ttatcgcggc ttagtgaaaa tcatgccgac ggcaaccaat gcgcgcaatt
    15901 tcactcagtg cgactcaatg ctgattggcg ctaattgtgg ggcgcatacc ttcccgtatg
    15961 tcgaatgtcg caataacagc gcacaactgg agcacgaggc aacgacatca cgtattggtg
    16021 aagatcaact gttttactgc ctgcaacgcg ggatcagcga agaagacgcc atctcgatga
    16081 ttgttaacgg tttctgcaaa gacgtgttct cagaactgcc gctggaattt gccgttgaag
    16141 cacaaaaact cctcgccatc agtcttgaac acagcgtcgg ataaggaata aacatgttaa
    16201 gtattaaaga tttacacgtc agcgtggaag ataaagctat cctgcgtgga ttaagcctcg
    16261 acgttcgtcc cggcgaagtt cacgccatta tggggccaaa cggttcgggc aaaagtacct
    16321 tatcggcaac gcttgccggg cgagaagatt atgaagtgac gggcggcacg gttgagttca
    16381 aaggcaaaga tttgcttgcg ctgtcgccgg aagatcgtgc aggcgaaggc atctttatgg
    16441 ccttccagta tccggtggag attcccggcg tcagtaacca gtttttcctg caaacggcac
    16501 ttaatgcggt gcgcagctat cgcggccagg aaacgctcga ccgctttgat tttcaggatt
    16561 tgatggaaga gaaaatcgct ctcctgaaga tgccggaaga tttattaacc cgttcggtaa
    16621 acgttggttt ttccggcggc gagaaaaagc gcaacgatat tttgcaaatg gcggtgctgg
    16681 aaccggagtt atgcattctt gatgagtcgg actccgggct ggatattgac gcattaaaag
    16741 tggtcgccga tggcgtgaac tcgctgcgtg atggcaagcg ctcattcatc attgttacgc
    16801 actaccaacg cattctcgac tacatcaagc ctgattacgt tcatgtgcta tatcagggac
    16861 gaattgtgaa atccggcgat ttcacgttgg tcaaacaact ggaggagcag ggttatggct
    16921 ggcttaccga acagcagtaa tgcgctgcaa cagtggcatc acttgtttga agctgaaggg
    16981 acaaaacgct caccgcaagc acagcagcat ttacaacaat tgctgcgtac cggactgccg
    17041 acacgtaaac atgaaaactg gaaatatacg ccgctggaag ggctgaccaa tagccagttt
    17101 gtcagcattg cgggagagat atccccacag cagcgagatg ccttagcgtt aacgttagac
    17161 gctgtgcggc tggtatttgt cgatggacgt tacgtgtcag cactgagcga tgcgactgaa
    17221 ggcagcgggt atgaagtgag cattaacgac gaccgtcagg gggtacccga cgctattcag
    17281 gcggaagtgt ttctgcattt gacggaaagc ctggcacaaa gcgtgacgca tatcgccgtg
    17341 aagcgcggtc aacggccggc aaagccattg ctgttaatgc atattaccca gggcgtggca
    17401 ggtgaagagg tcaacactgc ccattaccga catcatctgg atctggcgga aggtgccgaa
    17461 gcaacggtga tcgaacattt tgtcagcctt aatgatgctc gtcacttcac cggcgcacgg
    17521 ttcactatca atgtcgcagc gaacgcccaa ttgcagcata tcaagctggc gtttgaaaac
    17581 ccggtcagtc accactttgc ccataacgat ttgttgctgg ctgacgatgc caccgcattt
    17641 agccatagtt tcctgctggg tggcgcagtg ttacgacaca acaccagtac gcaactcaat
    17701 ggcgaaaaca gcacgctgcg gatcaatagc ctggcgatgc cggtgaaaaa cgaggtgtgt
    17761 gatacccgta cctggctgga acacaataaa ggtttttgta acagccgaca gttgcacaaa
    17821 actatcgtca gcgacaaagg ccgcgcggta tttaacggtt tgatcaacgt cgcgcagcac
    17881 gccatcaaaa cggatggtca gatgaccaac aataatctgc tgatgggcaa actggcagaa
    17941 gtggatacga aaccgcagct ggaaatctat gcagatgatg tgaaatgcag ccacggcgcg
    18001 acggtggggc gtattgatga tgaacagatg ttctatctgc gctcgcgcgg gatcaatcag
    18061 caggatgccc agcagatgat catttacgcc tttgctgccg aactgacgga agcactgcgt
    18121 gatgaggggc ttaaacagca ggtgctggcc cgaatcggtc aacgactgcc aggaggtgca
    18181 agatgacttt ttccgtcgac aaagtgcggg ccgactttcc ggtgctttcg cgtgaggtaa
    18241 acggtttgcc gctggcttat ctcgacagcg ccgccagtgc gcagaaacca agccaggtga
    18301 ttgactccga agccgagttt tatcgtcacg gctacgcggc ggtgcatcgc ggtattcata
    18361 ccttaagcgc ccaggcgacc gagaaaatgg agaacgtgcg caagcgggca tcgctgttta
    18421 ttaatgcccg ttcggcggaa gagctggtgt tcgtccgcgg cacgacggaa gggatcaatc
    18481 tggtcgccaa tagttggggc aacagcaacg tgcgggcggg cgataacatc atcatcagtc
    18541 agatggagca ccacgctaac attgttccct ggcagatgct ttgcgcacgc gttggcgcag
    18601 agctgcgtgt gatcccgctc aatcccgacg gtacgctgca actggagacg ctacctaatc
    18661 tgttcgatga gaaaactcgc ctgctggcaa ttactcatgt ctccaacgtg cttggcacag
    18721 aaaatcccct ggcggaaatg atcacgcttg cgcatcagca tggcgcaaaa gtgctggtgg
    18781 atggcgctca ggcggtgatg catcatccgg tggacgttca ggcgctggat tgcgattttt
    18841 acgtattctc cgggcataaa ctgtatggcc ccaccggaat tggcattctt tatgtgaaag
    18901 aagccttgtt gcaggagatg ccgccgtggg aagggggcgg ttctatgatc gccaccgtca
    18961 gcctgagtga aggcactacc tggaccaaag caccatggcg gtttgaagcc ggtacaccca
    19021 ataccggggg catcattggt cttggcgcgg cgctggagta tgtttcggcg ctggggctta
    19081 ataacatagc cgagtatgaa cagaatctga tgcactacgc gctatcacag ctggaatctg
    19141 taccggatct cactctctat ggcccgcgga acaggcttgg cgttattgct tttaatcttg
    19201 gtaaacacca cgcctatgat gttggcagtt ttctcgataa ctacggcatt gctgtgcgta
    19261 ccggacatca ctgcgctatg ccattaatgg cctattacaa cgtccctgct atgtgtcggg
    19321 cgtcgctggc catgtataac acccatgaag aagtggatcg tctggtgacc ggactgcaac
    19381 gtattcaccg tctgctggga taacagggag gcactatggc tttattgccg gataaagaaa
    19441 aattgctgcg taatttttta cgctgcgcca actgggaaga gaaatatctc tacattattg
    19501 agctgggcca gcgtctgcca gaattacgcg ccgaagaccg aagcccacaa aatagcattc
    19561 agggctgcca gagtcaggtg tggattgtca tgcgccagaa tgcgcaggga attattgaat
    19621 tgcagggcga cagcgatgcg gcgattgtga aagggcttat tgcggtcgtc tttattctct
    19681 acgatcagat gacgccgcag gatattgtca atttcgatgt gcgtccgtgg tttgaaaaaa
    19741 tggcgctcac ccaacatctc accccatctc gttcacaagg tctggaagcg atgattcgcg
    19801 caattcgcgc caaagccgct gcacttagct aaactaaagg gacagctttc atccggttgg
    19861 ctcacattgc cggatggtca atgtttacac tgacctgcac aggagtgttt tggtttcagg
    19921 tgaacataag cgccatccga cgtttcagcg tgagtctccg gcaaatacag gaggtttaca
    19981 atgaaacgcg cgtctttgct tacactcacg cttatcggcg cttttagcgc catccaggct
    20041 gcctgggcgg ttgattatcc gctaccacca accggaagcc gactggttgg gcaaaatcaa
    20101 acgtatacgg tgcaagaagg ggataaaaac cttcaggcta ttgcccgacg ttttgatact
    20161 gcggcaatgt tgatccttga agccaataac actatcgccc cggtgccaaa acctggtacg
    20221 acgataacta ttccttcaca actgttatta cctgatgcac cgcgtcaggg gattatcgtt
    20281 aaccttgcag agctgcgcct ttattattat ccgccgggag aaaatattgt gcaggtttat
    20341 ccaataggta ttggattgca ggggctggaa acgccggtga tggaaacgcg tgttgggcag
    20401 aaaatcccta acccaacctg gacgcctacg gcaggcattc gtcaacgttc gctggagcgt
    20461 ggcattaaat taccgccagt cgttcctgcc ggaccaaata acccgctagg acgttacgca
    20521 ctgcgcctcg cgcatggtaa tggcgaatac ctcattcatg gtaccagtgc gccggacagc
    20581 gtcggtttgc gcgtcagttc agggtgtatt cgcatgaatg caccggatat taaagccttg
    20641 ttctccagcg tgcggacggg aacgccggtg aaagtgatca acgaaccggt gaaatattcc
    20701 gtggaaccta acgggatgcg ttatgttgaa gtacatcgac cactatcagc agaagaacag
    20761 caaaacgttc agacaatgcc atacacactg ccagcaggct ttacgcaatt taaagacaat
    20821 aaggctgtag atcagaagtt agtcgataaa gcgttgtatc gtcgggcagg gtatccggtt
    20881 tcggtgagca gtggagcaac tcccgcagcc agcaatgcgc cttcagtaga gtcagcgcag
    20941 aatggtgaac cagagcaagg gaatatgtta cgcgcgacgc agtagcggta aacggcagac
    21001 aaaaaaaatg gcgcacaatg tgcgccattt ttcacttcac aggtactatt acttgcggta
    21061 tttagtagcc atgttgtcca gacgctggtt agcacgagct gcgtcatctt tagcagcctg
    21121 aacgtcggaa cgcattgcgt tcacgtcgtt gctcagctgg tcaactttag cgttcagagt
    21181 ctgaacgtca gaagacagct gatcgatttt agcgttgctg gagcaacctg ccagcagagt
    21241 agaacccagg attaccgcgc ccagtaccag tttagtagct ttcattatta ataccctcta
    21301 gattgagtta atctccatgt agcgttacaa gtattacaca aagtttttta tgttgagaat
    21361 atttttttga tgggaaggca cttatttttg atcgttcgct caaagaagca tcgaacgctg
    21421 ggttttagat aaaaaaattg agagaaaaca ggatgcttcc atcggat
//
LOCUS       DAPGWB010000074        21204 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.074, whole genome shotgun sequence.
ACCESSION   DAPGWB010000074 DAPGWB010000000
VERSION     DAPGWB010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 21204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21204
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.074"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            222..722
                     /gene="tssB"
                     /locus_tag="RHX79_002645"
     CDS             222..722
                     /gene="tssB"
                     /locus_tag="RHX79_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     small subunit"
                     /protein_id="HDV2197799.1"
                     /translation="MSKKFEGSVAPRERINISYVPKTDGQTAEVELPLNMLVVGDTGN
                     TQETSPLDERQAVSVNKHNFGAVMAEAAIGLNFTVPATLKGSTTDDELNVALNIKSLD
                     DFSPDSVARQVPEVNKLLELREALTALKGPMGNLPAFRTQLQALLENEESREQLLKEI
                     GQVSNK"
     gene            757..981
                     /locus_tag="RHX79_002646"
     CDS             757..981
                     /locus_tag="RHX79_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197800.1"
                     /translation="MTAHKNISGTYHLSVADILQVVYQVCFSPSVEINQDGVAALITT
                     LDRRISDLLDEIIHFCEFQQSASHWQRVLH"
     gene            1032..2507
                     /gene="tssC"
                     /locus_tag="RHX79_002647"
     CDS             1032..2507
                     /gene="tssC"
                     /locus_tag="RHX79_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001501045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HDV2197801.1"
                     /translation="MSLQEEELVSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQ
                     GVTAFIASILQSTASAEPVNKLAVDSMIADIDERISRQMDVIIHAPAFQQVESFWRSL
                     KTMVDRVDFRENIKVNVLHVTKQELLEDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIA
                     AVLGAYEFKNTAPDMKLLQYVSAVGAMAHAPFLSSVSPEFMGLNSWTELPNIKDLYAI
                     FEGPAYTKWRALRDSEDSRYLGLTAPRFLLRQPYSPTDNPVKNFNYHEDVSRNHEDYL
                     WGNTAWMLACNVADSFAKYRWCPNIIGPQSGGAVKDLPVHLFETMGQIQAKIPTEVLV
                     TDRREFELAEEGFITLTMRKDSDNAAFFSANSVQKPKHFPGKDAETNYKLGTQLPYLF
                     IINRLAHYIKVLQREQLGSWKERSDLERELNTWIRQYVADQENPPADVRSRKPLRAAR
                     VEVMDVEGEPGWYQVALSVRPHFKFMGANFELSLVGRLDRE"
     gene            2514..2927
                     /gene="tssE"
                     /locus_tag="RHX79_002648"
     CDS             2514..2927
                     /gene="tssE"
                     /locus_tag="RHX79_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssE"
                     /protein_id="HDV2197802.1"
                     /translation="MIPDRERTTGSLFERMEASPARNWQGSSIHALRQSIRQNLRNIL
                     NTRSGSCRGAPELGIDEPEGAENFRESMSLAIAQCIERYEPRISHAEVQAVVSSATSP
                     LDMTFHITAWVTFNETHEVLEFDMAPNGSQHYRVD"
     gene            2931..4781
                     /gene="tssF"
                     /locus_tag="RHX79_002649"
     CDS             2931..4781
                     /gene="tssF"
                     /locus_tag="RHX79_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HDV2197803.1"
                     /translation="MEFEERYFREELDYLRQLSKLLATEKPHLARFLAKKDADPDIER
                     LLEGVAFLTGNLRQKIEDEFPELTHGLIKMLWPNYLRPVPAMTLIEYTPDMDKSSVPV
                     LIPRNEQFTTNAGEIRVDEVLPSDAKKEEPPPCTFTLCRDIWLLPVRLEQIENRSTTR
                     NGVINITFSVAPGTDFRTLDLNKLRFWLGNDDNYTRNQLYLWFCEYLQGADLTVGEQH
                     IRLPEFMLKAVGFEPQDAMLPWPKNVHSGYRILQEYFCYPDAFLFFDLCGCPALPDGL
                     QGESFTLQLRFSRPLPVDIRLRRDSLRLYCAPAINLFIHHAEAITLDNRRADYPLVPS
                     RHYPEHYDVFSVNGVISQVQDMFRKKDLGRPVSTQAARQWPAFESFSHQMEYSRKREV
                     VYWHHRTKTSLFHRGFDHTLAFIHADGSYPSDESLLSNEVVSVSLTCTNRELPSQIRS
                     GDITGTTGKNAAVASFRNITRPTQPLWPVIDGSLHWSLLSAMNLNYLSLLDTDALKQV
                     IANFDRHAIHHPQTARLSQQKLDAIERLETRPVDRLFTGIPVRGLASTLYLHPEPFVC
                     EGEMYLLGTVLSHFLSLYASVNSFHMLTVVNTESQETWKWTERTGQHPLI"
     gene            4745..5827
                     /gene="tssG"
                     /locus_tag="RHX79_002650"
     CDS             4745..5827
                     /gene="tssG"
                     /locus_tag="RHX79_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssG"
                     /protein_id="HDV2197804.1"
                     /translation="MDGKNRAASSYLSPGNPPADKEQNDPLAQVFHNACSYNFFAMAE
                     LLHRLAKGEKGTPELSLRDDPAQETLRFSADASLAFPCSDISALKRDTSGAFRMTTTF
                     MGLQGSQSPLPGYYLDHLAWKAVHEQSPVGDFLDMFSHRLTQFVWHIWRKYRYHISFR
                     NGGVDAFSQRMYSLVGLGHRQLRDKLAINHSKMLAYSGILANPGRSPEIICGLVSHCF
                     DLSEVTLQNWQRRKVDIEPDQQNSLGSYSLKNGEKLAGRSVLGNFVLGTRVPDLSGKF
                     QLSITSLTRKQFLSFLPSGENFLPLTMFVSFILRDQLAWDLHLGLAPEQVGAMRLGDN
                     KSALLGWTSFLGTPEERPSVTIRVRS"
     gene            5852..7132
                     /gene="tagH"
                     /locus_tag="RHX79_002651"
     CDS             5852..7132
                     /gene="tagH"
                     /locus_tag="RHX79_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated FHA domain
                     protein TagH"
                     /protein_id="HDV2197805.1"
                     /translation="MPEEKLHTLSLQVINGSELESGRAARCLFTQQGNVGHGPECHWS
                     VQDRQQSIPAQAFTVILHDGTFCLRPQTAQLWLNQAKVTATSDLIQLRQGDEIQIGRL
                     MVRVHLNRGDIPHYDEEMATPETIVTNRDMLTDTLLSTEGAPHYPGMTHRHQLADTVV
                     NGFSADPLQALQSESLITTGDPLSGIAAVRPSAPLSDPASNGGINTPFMDLPPIYASP
                     GDRNDDVSAAEMAQRHLAVTPLLRGLGGSLTMSNSDDADDFLEEAGRTLQAAIKGLLD
                     LQQQRNSLSDKHLRPLEDNPLRLNMDYATALDVMFAEGKSPVHLAAPAAVSESLRNVR
                     HHEEANRAAIVESLRVLLDAFSPQNLLRRFVQYRRSHELRQPLDDAGAWQMYSHYYEE
                     LASDRQQGFEMLFNEVYAQVYDRVLREKQREPEA"
     gene            7129..7653
                     /gene="tssJ"
                     /locus_tag="RHX79_002652"
     CDS             7129..7653
                     /gene="tssJ"
                     /locus_tag="RHX79_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system lipoprotein TssJ"
                     /protein_id="HDV2197806.1"
                     /translation="MNRKAFLACVLMCVILTGCETAKKISEVIKNPDIQVGSLKEQPS
                     EITVTLLTEPDTNTNAEGESAAVDVQLVYLTDDSKLLAADYDQIASTPLPDVLGKNYI
                     DHQDFNLLPDTIKTLPPVKLDEKTQFIGVVAYFSDDQATEWKQIETVEGTGHHYRLLV
                     HVRQSSIEMKKEDE"
     gene            7656..8987
                     /gene="tssK"
                     /locus_tag="RHX79_002653"
     CDS             7656..8987
                     /gene="tssK"
                     /locus_tag="RHX79_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssK"
                     /protein_id="HDV2197807.1"
                     /translation="MATTRNKVMWQEGMLMRPHHFQQQQRYNDYLDNQRFRAMNDLSW
                     GFTELTLNNELLAQGKIMIDSASGTLPDGTVFSIPDQDALPDPLHPQNFPDERSRNIY
                     LALPVASDVRNEISDGRRTGRYRLNYADVRDLHSEEGDARTLTLGQLTPRIMSGAEDM
                     SAYITLPLCRISDRHADGSLTLDDDFIPSCQNIQVSKKLRVYLKEVQGAIGGRASDLA
                     NRIGSPAQSGIADVAEFMMLQLLNRNQTRFTHRARRSQLHPEDFYLDLAGLLGELMTF
                     TEPSRLPCPLDVYDHHDLTKTFKTLLPEVKRALHTVLSPRAVNLPLHLRDGIWQADIH
                     DTELLQSATFVLAVAANVPVDQIQRQFIQQSKISSPEKIRNMVSVQIPGIPLRALMVA
                     PRQLPYHSGFSYFELDKSGQAWTEMAAAGAVALHVSGSFPDLNMQLWAIRG"
     gene            8992..9753
                     /gene="icmH"
                     /locus_tag="RHX79_002654"
     CDS             8992..9753
                     /gene="icmH"
                     /locus_tag="RHX79_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IVB secretion system protein IcmH/DotU"
                     /protein_id="HDV2197808.1"
                     /translation="MDEGSLSLPPFTGHDEKSQRNYHLALRGNSLNPMIDAATPLLGM
                     VMRLSTMNSQTMPEHLFAQVVTDVQAVEQLLQEQGYEPGVIISFRYILCTFIDEAALG
                     NGWSNKNEWIKQSLLVHFHNEAWGGEKVFILLERLIREPKRYQDLLEFLWICFSLGFR
                     GRYKVAAQDQGEFEQIYRRLYHVLHKLRGDAPFPLLHQDKKTQGGRYQLISRLTVKHI
                     FCGGVVVLALFYLFYLLRLDSQTQDILHQLNKLLR"
     gene            9762..12599
                     /gene="tssH"
                     /locus_tag="RHX79_002655"
     CDS             9762..12599
                     /gene="tssH"
                     /locus_tag="RHX79_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system ATPase TssH"
                     /protein_id="HDV2197809.1"
                     /translation="MIQIDLPTLVKRLNLFSRQALEMAASECMSQQAAEITVSHVLIQ
                     MLAMPRSDLRVITRQGDIGMEELRQALTVENYTTARSADSYPAFSPMLVEWLKEGWLL
                     ASAEMQHSELRGGVLLLALLHSPLRYIPPAAARLLTGINRDRLQQDFVQWTQESAESV
                     VPDADGKGAGTMTDASDTLLARYAKNMTADARNGRLDPVLCRDHEIDLMIDILCRRRK
                     NNPVVVGEAGVGKSALIEGLALRIVAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEK
                     RFKGLMAEVISSPVPVILFIDEAHTLIGAGNQQGGLDISNLLKPALARGELKTIAATT
                     WSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDDALQAA
                     ATLSERYLSGRQLPDKAIDVLDTACARVAINLSSPPKQISALTTLSHQQEAEIRQLER
                     ELRIGLRTDTSRMTEVLVQYDETLTALDELEAAWHQQQTLVREIIALRQQLLGVAEDD
                     AAPLPDADTVEDTQPESESESESESESESESESESESESESESEQDNTGAEPADEAGS
                     EQPEETAETVSPVQRLAHLTAELDALHNDRLLVSPHVDKKQIAAVIAEWTGVPLNRLS
                     QNEMSVITDLPKWLGDTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLLAGPSGVG
                     KTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQ
                     KPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIV
                     EHADDPETMQEVLYPVLADFFKPALLARMEVVPYLPLSKETLATIIAGKLARLDNVLR
                     SRFGAEVIIEPEVTDEIMSRVTRAENGARMLESVIDGNMLPPLSLLLLQKMAANTAVA
                     RIRLSAVDGAFTADVEDAQNDESVTKDETVL"
     gene            12596..13339
                     /gene="tagO"
                     /locus_tag="RHX79_002656"
     CDS             12596..13339
                     /gene="tagO"
                     /locus_tag="RHX79_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated protein
                     TagO"
                     /protein_id="HDV2197810.1"
                     /translation="MSRLRVFRQTGWFIAGLMTGLPATAAPAEASSMAGVAVAVATTT
                     PPDATATLQAMQSCRRESAALERLDCYDRLLAPLSPSGFDGALVKAGFVGEAWTRATE
                     QEKHRQGNTTELLVTQVPGERPTVVITTPAIGHVPPRPVLMFSCVDNITRMQVALMHP
                     LDVHDIAVTLNADNRALRSHWFVRENGTLLESSRGLSGIDEIKQLFGAKTLTVDTGAD
                     NAAGKLTFNIDGLARAIAPLRDACHWAGE"
     gene            13344..14756
                     /gene="tssA"
                     /locus_tag="RHX79_002657"
     CDS             13344..14756
                     /gene="tssA"
                     /locus_tag="RHX79_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system protein TssA"
                     /protein_id="HDV2197811.1"
                     /translation="MAMDLRDPNVWISHLLENLPEEKLASALKDDNPNWEYIDGEIVK
                     LGSLAHSQLDIPELQRRGLVILASESKDFRLLAHLLRTLQHAGDPHLALRLLALYVEH
                     YWAVAAPQNMAHKKRFASQVIKRFETGIEVFSQNAATAQRDALSGELAKLAQCWQSHN
                     APELAQATDDLFALYQRAFNRAAPAPVPTPAASGSSPQTTATSESGVTQPSAPAPQIV
                     IDSHDDKAWRDTLLKVAAILCERQPDSPQGYRLRRHALWQNITSTPQAESDGRTPLAA
                     VSADMVADYHAQLGSADMALWQQVEKSVLLAPYWLDGHCLSAQTALRLGYKQVADAIR
                     DEVIRFLERLPQLTGLLFNDHTPFISEQTKQWLAASPDAKVAPVAQIGEESKAARACF
                     AEQGLEAALRYLDMLPEGDPRDQFHRQYLAAQLTEEAGLVQLAQQQYRMLFRMGLQMM
                     VADWEPSLLEQLEQKFTAEQ"
     gene            14865..18299
                     /gene="tssM"
                     /locus_tag="RHX79_002658"
     CDS             14865..18299
                     /gene="tssM"
                     /locus_tag="RHX79_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308245.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system membrane subunit TssM"
                     /protein_id="HDV2197812.1"
                     /translation="MLILAWIFLLVWIWWKGPTWTLYEEQWLKPLANRWLATAAWGII
                     ALMWLTVRVMKRLQQLEKMQKQQREEAVDPLSVELNAQQRYLDRWLLRLQRHLDNRRF
                     LWQLPWYMVIGPAGSGKTTLLREGFPSDIIYAPEGARGAEQRLYLTPHVGKQAVIFDI
                     DGTLCAPADADILHRRLWEHALGWLKEKRARQPLNGIILTLDLPDLLTADKRRREHLL
                     QALRSRLQDIRQHLHCQLPVYVVLTRLDLLQGFAALFQSLNRQDRDAILGVTFTRRAH
                     ENDDWRTELNAFWQTWVDRMNLALPDLMVAQTHTRASLFSFSRQMQGSREPLVSLLEG
                     LLDGENMNVMLRGVYLTSSLQRGQMDDIFTQSAARQYRLGNNPLASWPLVDTAPYFTR
                     SLFPQALLAEPNLATESRAWLIRSRRRLTVFSATGGVAALLLITGWHHYYNGNYQSGI
                     TVLKQAKAFMDVPPPQGEDDFGNLQLPLLNPVRDATLAYGDWGDRSRLADMGLYQGRR
                     IGPYVEQTYLQLLEQRYLPSLFNGLVKELNAAPPESEEKLAVLRVMRMLEDKSGRNNQ
                     VVKQYMAKRWSEKFHGQRDIQAQLMSHLDYALAHTDWHAERQAGDGDAISRWTPYDKP
                     VVSAQKELSKLPVYQRVYQSLKTRALGVLPADLNLRDQVGPTFDQVFTSADDNKLVVP
                     QFLTRYGLQSYFVKQRDELVELTAMDSWVLNLTRSVKYSDADRAEIQRQLTEQYISDY
                     TATWRAGMDNLNIRNFESIGQLTGALEQVISGDQPLQRALTVLRDNTQPGVFSEKLSA
                     KEREEALAEPDYQLLTRLGHEFAPENSTLAVQKDKESTMQAVYQQLTELHRYLLAIQN
                     APVPGKSALKAVQLRLDQNSSDPIFATRQMAKTLPAPLNRWVGRLADQAWHVVMVEAV
                     HYMEVDWRDSVVKPFNEQLANNYPFNPRSAQDASLDAFERFFKPDGILDTFYQQNLKL
                     FIDNDLSLEDGDNNVIIREDIIAQLETAQKIRDIFFSKQNGLGTSFAVETVSLSGNKR
                     RSVLNLDGQLVDYSQGRNYTAHLVWPNNMREGNESKLTLIGTSGNAPRSISFSGPWAQ
                     FRLFGAGQLTGVQDGNFTVRFSVDGGAMTYRVHTDTEDNPFSGGLFSQFGLSDTLY"
     gene            18310..19662
                     /locus_tag="RHX79_002659"
     CDS             18310..19662
                     /locus_tag="RHX79_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001087757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system ImpA family N-terminal
                     domain-containing protein"
                     /protein_id="HDV2197813.1"
                     /translation="MNSNVLTQTIVTGSDPRGLPEFSAIREEINKASHPSQPELNWKL
                     VESLALAIFKANGVDLHTATYYTLARTRTQGLAGFCEGAELLAAMVSHDWDKFWPQGG
                     PARTEMLDWFNSRTGNILRQQISFAESDLPLIYRTERALQLICDKLQQVELKRVPRVE
                     NLLYFMQNTRKRLGPQLKSNTENAAQTTVRTLIYAPETQASSTPEAVVPPLPGLPEMK
                     VEVRSLTENPPQASVINQGSTVRGFIAGIACSVAVASALWWWQVYPVQQQLLQVNDTA
                     QGAATVWMASPELENYERRLQQLLDTSPVQPLETGMQMMRVADSRWPESLQQQQASTQ
                     WNEALKTRAQSSPQLRGWLQTRQDLHAFADLVMQREKEGLTLSYIKNVIWQAERGLGQ
                     ETPVESLLTQYHDARAQKQNTDALEKQINERLEGVLSRWLLLKNNVMPEAATGTTAEK
                     "
     gene            19686..20168
                     /locus_tag="RHX79_002660"
     CDS             19686..20168
                     /locus_tag="RHX79_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hcp family type VI secretion system effector"
                     /protein_id="HDV2197814.1"
                     /translation="MANISYLSLSGETQGLISAGCSTLDSVGNKAQPEHKDQIMVYAL
                     MHSISRSQNVNHHELIITKPVDKSSPLLAKALSDNEKMAICEFILYRTSKAGIYQPYY
                     KINLSKARISSIDFVTPHAVLEKELEPQERIAFIYEDISWEHTLAGTNAMSKWQDRVQ
                     "
     gene            20212..21127
                     /locus_tag="RHX79_002661"
                     /pseudo
     CDS             20212..21127
                     /locus_tag="RHX79_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000908053.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         5055 a         5716 c         5816 g         4617 t
ORIGIN      
        1 gaattacaca ggttcacaca atctatttaa cgcttgcaga atacccctct ttacgatcga
       61 taaaaagtcc ttttcttatt tattttgaag cgtaaaatgc ggggtgatga aggagtggtg
      121 attttatttt caccgccatt agggcggcat tgccgatatt ttttgcggta caaatatgcc
      181 gtgttcatgg cctgtacgag ataacatgac ggatcacttt tatgagcaaa aaatttgaag
      241 gcagcgtcgc gcctcgcgag cgtattaata tatcgtatgt cccaaaaaca gatggccaga
      301 cggctgaagt ggaacttccg cttaacatgc tcgttgtcgg cgataccgga aatacgcagg
      361 aaacatcccc actggatgaa cgtcaggcag tttccgttaa caagcacaat ttcggtgcag
      421 tgatggctga agcagccatt ggcctcaatt ttactgtccc cgccacgctg aagggaagca
      481 caacagacga tgaactgaat gtggcgctga atatcaaatc actggatgat ttttcaccag
      541 atagcgtggc ccggcaggtt ccggaagtga ataaattgct ggaactgcgt gaagcactga
      601 ctgcactgaa ggggccgatg ggtaaccttc cggcattccg tacccagctc caggcattgc
      661 tggaaaatga agagtcccgc gagcagttgc tcaaagaaat cggccaggtg agcaataaat
      721 aaccaccact atttcattaa acagggttat ccaggcatga cggcacacaa aaatatctcc
      781 gggacatacc acctctctgt tgcagacatt ctgcaggtgg tttaccaggt atgtttcagc
      841 ccgtccgttg aaatcaacca ggatggtgtg gctgcgctga ttacaacact ggatcgccgt
      901 atcagtgatc tattggatga gattatccat ttttgtgagt ttcagcagag cgcgtcgcac
      961 tggcagcgcg tacttcactg acggcgaaaa gccggtttca gaaacacagc taaaacagaa
     1021 ggattttcag tatgtcttta caggaagagg aactcgtttc cagtcatgcc gggcagcctg
     1081 agcaggcatc gtcgctgctt gatcaaatca tggcacagac ccgtattcag cccggttcgg
     1141 aaggttatga cgttgcccgc cagggtgtga cagcctttat tgccagcatc ctgcaatcca
     1201 ctgcatctgc cgaaccggtc aataaactgg ccgtggacag catgattgca gatatagatg
     1261 aacgcatcag ccgccagatg gatgtcatca tccatgcgcc tgcctttcag caggtcgagt
     1321 cgttctggcg ctcactgaaa accatggtgg atcgcgttga tttccgtgaa aacatcaagg
     1381 tcaacgtgct tcatgtcacg aagcaggaac ttctggaaga ctttgaattt gccccagaaa
     1441 ttattcagtc cggattttat aaacacgttt attcgtccgg attcggacag tttggtggtg
     1501 aacccatcgc tgccgtgctg ggcgcttatg agttcaaaaa taccgcacct gacatgaaac
     1561 tgctgcaata cgtcagtgct gtgggcgcaa tggcgcacgc accgttcctg tcctccgttt
     1621 ccccggagtt tatggggctg aactcgtgga ccgaactgcc taatatcaaa gatctttatg
     1681 ccatctttga aggtccggcc tacaccaaat ggcgcgccct gcgtgactcg gaagattcgc
     1741 gctatttagg gcttacggca ccccgcttcc tgcttcgcca gccttattca ccaacagata
     1801 accctgttaa gaactttaac tatcacgaag atgtcagccg gaatcacgaa gattatctgt
     1861 ggggtaatac ggcctggatg ctggcgtgca atgtcgcaga cagttttgcc aaataccgct
     1921 ggtgtccaaa tatcatcggt ccgcaaagcg gcggtgcagt gaaagatctg ccggtgcatc
     1981 tgttcgaaac gatgggtcag attcaggcca aaatcccaac cgaggtgctg gtcaccgatc
     2041 gccgcgaatt tgaactggct gaagagggtt ttatcaccct taccatgcgt aaagactctg
     2101 ataatgcagc ctttttctct gcaaactcgg tacaaaaacc gaagcacttt ccgggtaaag
     2161 acgcagaaac caactataag ttgggtacgc agcttcctta tctcttcatc atcaatcggt
     2221 tagcgcacta catcaaggtg ttgcagcgtg agcaactggg gtcatggaaa gaaaggagcg
     2281 acttagagag ggagcttaat acctggatcc gtcagtatgt tgccgaccag gaaaacccgc
     2341 ctgcggacgt gcgcagccgc aagcctctgc gtgctgccag agttgaggtt atggatgtgg
     2401 aaggcgaacc cggctggtac caggtcgcgc tgagcgtgcg gccccatttt aaatttatgg
     2461 gggcaaactt tgagctttcc ctggttggcc ggttagacag ggagtaacac gccatgatac
     2521 cggatcggga aagaaccaca ggttctcttt ttgagcgtat ggaagcctca ccggccagaa
     2581 actggcaggg aagcagtatt catgcgctca ggcagtccat tcgccagaac ctgcgaaaca
     2641 ttcttaatac ccggtccggt agttgccggg gtgcgcctga actgggcatt gatgaaccgg
     2701 aaggggctga aaacttccgc gaatcaatga gtctggccat cgcgcaatgt atagaacgct
     2761 atgaaccccg gatctcacac gctgaagtgc aggctgtggt ttcatccgcc accagcccgc
     2821 tggatatgac gtttcatatt acagcctggg tgacatttaa cgaaacacat gaagtgcttg
     2881 aatttgatat ggcaccgaat ggcagccagc attatcgggt ggactgacag atggaatttg
     2941 aagaacgcta tttccgggaa gaactcgatt acctgcgcca gctcagcaag ctgctggcaa
     3001 cggaaaaacc ccatcttgcc cgcttcctgg ccaaaaaaga tgcggatccg gatattgaac
     3061 gcctgctgga aggcgtggct tttcttaccg gcaatctccg ccagaaaatt gaggatgaat
     3121 tcccagaact gacgcacggg cttattaaga tgctctggcc taattacctg cgtccggttc
     3181 cggcaatgac ccttattgaa tatacgccgg atatggataa gtcttctgtg ccggtgttaa
     3241 tcccccgtaa tgagcagttt acaaccaacg ccggggaaat cagagtcgat gaagtgctgc
     3301 cctccgatgc taaaaaggag gagccgcctc cctgtacctt caccctctgc cgggatatct
     3361 ggctgctgcc cgttcgcctg gagcagattg aaaaccgcag tacgacccgt aatggtgtta
     3421 tcaacatcac cttttcggtc gcaccgggaa cggacttccg cacgctggat ctgaacaaac
     3481 ttcgcttctg gctcggcaat gacgacaact atacccgtaa ccagctttat ttatggttct
     3541 gtgaatactt gcagggtgcc gacctgactg tgggtgaaca gcatattcgc ctgcctgagt
     3601 ttatgctgaa agctgtcggt tttgagccgc aggatgccat gctgccttgg ccgaaaaacg
     3661 tccacagcgg ctaccggatc cttcaggagt atttctgtta cccggatgcg tttctctttt
     3721 ttgatctttg tggttgcccg gcgttgcctg acggattgca gggtgaatcc tttaccctgc
     3781 aactgcgttt ttcgcgccca ttgcccgtgg acatccggtt gcgccgcgac tccctgcgcc
     3841 tgtattgcgc gcctgccatt aatttattta tccaccatgc agaagccatc acgctggaca
     3901 accggcgggc agactatccg ctggttccca gccgccatta tccggaacat tacgatgtct
     3961 tttccgttaa cggcgtgata agccaggtgc aggatatgtt caggaaaaaa gatctggggc
     4021 gtcctgtttc gacgcaggcc gcgcgccagt ggcctgcctt tgaaagtttc agccatcaga
     4081 tggaatacag ccggaagcgg gaagtggtgt actggcatca ccggaccaaa acatccctgt
     4141 tccatcgcgg ctttgatcat acccttgctt ttatacatgc tgatggcagt tatccgtcag
     4201 acgaatcgct gctcagtaat gaagtggttt cggtatcgct gacctgtacc aaccgtgagc
     4261 ttccgtcaca aattcgttcc ggcgatatca ccggcacaac cggtaaaaat gcggctgttg
     4321 cttcatttcg caacattacc cgcccgacgc aaccgctctg gccggtcatt gatggcagcc
     4381 tgcactggtc cctgctctcc gccatgaacc tgaattatct gtcattactg gatacggacg
     4441 cgctgaagca ggtcatcgcc aactttgatc gccacgcaat ccatcatccg cagacggcgc
     4501 ggctgtcaca acaaaagctg gatgccattg agcgtctgga gacccgccct gtcgatcgcc
     4561 tgtttacggg cattcccgtc cgggggctgg cctccacgct gtatctgcac ccggagccgt
     4621 ttgtctgtga aggggaaatg tatctgctcg gtacggtgct ttcgcatttt ctgtcgctgt
     4681 acgccagcgt taactcattc cacatgctga ccgttgtgaa cacagaaagc caggagacat
     4741 ggaaatggac ggaaagaacc gggcagcatc ctcttatctg agtccgggaa atcccccggc
     4801 agataaagag cagaatgatc cgctggcaca ggttttccat aatgcctgct cttacaattt
     4861 ttttgcgatg gcggagctgt tgcaccgcct ggcaaagggt gaaaagggga cgccagaatt
     4921 atccctgcgc gacgatccgg cacaggaaac cctgcgtttc agcgccgatg ccagccttgc
     4981 cttcccgtgc agtgatatca gtgcgctgaa acgggatacg tcaggggcat tcaggatgac
     5041 caccaccttt atggggttac aggggagcca gtcgcctctc cccggttatt acctcgatca
     5101 cctggcctgg aaagcggtac atgaacaaag tccggtaggt gattttctgg atatgttcag
     5161 ccaccgcctg acccagtttg tctggcatat ctggcgtaag taccgctatc acatcagttt
     5221 tcgtaacggc ggtgtggatg cgttctcgca gcgcatgtac tcccttgtcg ggctgggcca
     5281 ccgccagctt cgcgataagc tggcgattaa tcacagcaaa atgctggcgt attccgggat
     5341 cctggcaaat ccgggacgat ccccggaaat tatctgtggc ctggtgtccc actgctttga
     5401 tttgtcagaa gtgacgctgc aaaactggca acgtcgcaag gtggatattg aaccggatca
     5461 gcaaaatagt ctggggagct attctcttaa aaatggcgaa aaactggcgg gaagatcggt
     5521 actgggcaac tttgttctgg gtacacgagt gcccgatctc agcggaaaat tccagctcag
     5581 tattaccagc ctgacccgaa aacagttcct ctcttttctg ccgtccggcg aaaacttcct
     5641 gccactgacg atgttcgtgt ccttcatcct gcgcgatcag cttgcctggg acttacatct
     5701 ggggctggcg ccggagcagg tgggcgcaat gcgcctgggc gataacaaaa gtgcgctgct
     5761 gggctggacc agcttcctcg gcacaccgga agaacgaccc tcagtcacca tcagggtacg
     5821 gtcgtaaatt atgataatca cggagcagaa tatgccggaa gagaaactac acacgctttc
     5881 attgcaggtc attaacggca gtgagctgga aagcgggcgg gcggcgcgct gtctgttcac
     5941 acagcaggga aatgtcggcc atggccccga atgccactgg tcggtacagg atcgtcagca
     6001 gagcattccg gcccaggctt ttaccgttat cctgcacgat ggcacatttt gtctgcgccc
     6061 gcagacggca caactgtggc tgaatcaggc aaaagtcaca gcaacatcag acctaataca
     6121 gttgcgccag ggcgatgaga tccagatcgg acggctgatg gtgagggttc atctgaaccg
     6181 gggagatatt ccccattacg atgaggaaat ggccactccc gaaaccatcg ttaccaatcg
     6241 cgatatgctc acggataccc tgctatcaac ggagggtgcg ccacactatc cgggaatgac
     6301 tcaccggcac cagcttgcag acaccgtggt aaacggtttt tctgccgatc cactccaggc
     6361 acttcagtcc gaaagcctga ttaccacggg cgatccgctt tcaggcattg cggctgtccg
     6421 gccatcggca ccgctgtccg atccggcaag taatgggggg atcaatactc cgtttatgga
     6481 tctgccgccc atttatgcca gccccggcga tcgtaatgac gacgtctctg cggcagaaat
     6541 ggcgcaacgc caccttgcgg tcaccccctt acttcgcggt cttggcggct cgcttaccat
     6601 gagcaattcc gacgatgcgg atgattttct ggaggaggcc ggacgaacgt tacaggccgc
     6661 aataaaaggt ctgctcgatt tgcagcagca gcgtaacagc ctctcagaca aacatttgcg
     6721 cccgctggaa gataacccgc tgcgcctgaa catggattac gccaccgcgc tcgacgtaat
     6781 gtttgccgaa ggtaaaagcc cggtacatct ggcggctccc gccgccgtca gtgaaagcct
     6841 gcgcaatgtc cgccaccacg aagaagctaa ccgggcagca attgtggagt cgcttcgtgt
     6901 cctgctggat gctttctcac cacaaaatct gctgcgccgc tttgtgcagt accgccgcag
     6961 ccatgaactg cgccagccgc tggatgatgc cggagcatgg caaatgtaca gccattatta
     7021 cgaagaactg gcctccgatc gccagcaggg gtttgagatg ctgtttaacg aggtctacgc
     7081 ccaggtctat gaccgggtgc ttcgtgaaaa acagcgggag ccggaagcat gaacaggaag
     7141 gcgtttctgg cctgcgtgct gatgtgcgtc atattaaccg gctgcgaaac ggcgaaaaaa
     7201 atcagcgagg tgatcaaaaa cccggatatc caggtcggga gcctgaagga gcaaccttcg
     7261 gaaataaccg tcaccctgct gaccgaaccg gacaccaata ccaatgcgga gggtgaatca
     7321 gccgccgtgg atgtgcaact ggtgtacctg actgacgact caaaattgct ggcagccgac
     7381 tatgaccaga tagccagtac gccgctaccg gatgtgttgg gtaaaaacta tatcgaccac
     7441 caggatttca acctgttgcc ggacaccatc aaaaccctgc cgccggtaaa gctggatgag
     7501 aaaacgcagt ttattggtgt cgtggcctat ttctccgatg accaggccac tgaatggaaa
     7561 caaatcgaga cggtggaagg aaccggccac cattaccgcc tgctggtgca tgtacgtcaa
     7621 agcagcatcg aaatgaaaaa agaggatgaa taattatggc aaccacccgc aacaaggtga
     7681 tgtggcagga agggatgctg atgcgcccac accatttcca gcaacagcag cgttacaacg
     7741 actacctgga taaccagcgt ttccgggcca tgaatgattt atcctgggga tttaccgaac
     7801 tcaccctcaa caatgaactg ctggcgcagg gtaagatcat gattgacagc gcgtcaggca
     7861 cactgcccga cggcaccgtc ttttctatcc ccgaccagga cgcactgccc gatccgctgc
     7921 acccgcaaaa ttttccggac gaaagaagcc gcaatatcta cctcgctctg ccggtcgcca
     7981 gtgatgtgag aaatgaaatc agcgacggac ggcgaaccgg gcgttaccgg ctgaattatg
     8041 ccgatgtccg ggatttgcat tcagaagaag gtgacgcgcg aacattgacg ctgggtcaac
     8101 tgacgccgcg cattatgagc ggtgcagaag atatgagcgc ctatattacg ctcccgcttt
     8161 gccgtatcag cgatcgccat gccgatggct ccctgacgtt ggatgacgat tttatcccct
     8221 cctgccagaa tattcaggtc agtaagaaac tgcgtgttta tctcaaagag gtacaggggg
     8281 ccattggcgg acgggcaagc gatctggcaa accgtattgg ctctccggcg cagagcggca
     8341 tcgcggatgt ggcggaattt atgatgttgc agttacttaa ccgtaaccag acccggttta
     8401 cccatcgcgc ccgccgatcc cagctccacc cggaagattt ctaccttgat cttgctgggt
     8461 tgctgggtga actgatgacc tttaccgagc cgtcgcgcct gccctgcccg cttgatgtgt
     8521 atgatcatca tgatctgacc aaaacattta aaacactgtt accggaagtc aaacgggcgc
     8581 tgcataccgt actgtcgcca agagcggtca atctgccgct gcatctgcgt gacggtatct
     8641 ggcaggccga tatccatgac acagaactgc tgcaatctgc cacctttgtg ctggccgtgg
     8701 cggcaaacgt gccggtcgat cagatccagc gtcagtttat ccagcagtcg aaaatttcct
     8761 cgccggaaaa aatccgcaat atggtcagtg tgcagatccc cggtattcca ttgcgtgccc
     8821 ttatggtggc tccccgccag cttccttacc attccgggtt cagctatttc gaactcgaca
     8881 agagtggcca ggcctggaca gaaatggctg ccgccggggc cgttgcactg catgtttccg
     8941 gcagtttccc ggatctgaac atgcaactgt gggcgataag agggtaagac gatggatgag
     9001 gggtcactgt ctctgccacc atttaccgga cacgacgaaa aaagccagcg caactaccat
     9061 ctcgcgcttc gtggcaacag cctgaatccg atgatcgacg cggccacgcc gctactcggt
     9121 atggtaatgc gcctttcaac catgaacagc cagacgatgc cggagcatct ttttgctcag
     9181 gtggtgacag atgttcaggc cgtggagcaa ctgcttcagg agcagggcta cgaaccgggc
     9241 gtgattatct cgtttcgcta catcctctgc acgtttattg atgaagcggc gctcggtaac
     9301 ggctggtcaa acaagaacga gtggatcaag cagtcattgc tggtccattt ccacaacgaa
     9361 gcctggggtg gcgagaaagt tttcatcctg ctggagcgcc tgatccgtga acccaaacgt
     9421 taccaggatc tgctggaatt tctctggatc tgtttttctc tgggatttcg cgggcgctac
     9481 aaagtggcag cacaggatca gggggaattt gagcagatct accgccgtct gtaccacgtt
     9541 ctgcataaac tgcgcggcga tgcccctttc ccgctgttac accaggacaa aaaaacccag
     9601 ggcgggcgtt atcagctcat cagtcgcctg actgttaaac atattttttg tggtggcgtt
     9661 gtcgtgctgg cgttgtttta cctgttctat ctgttgcggc tggacagcca gacgcaggac
     9721 atcctgcacc agctaaacaa attacttcga taaggacgtt tatgatccag attgatcttc
     9781 ccacgctggt aaaacggctg aacctgttct cccgccaggc gctggagatg gccgcctctg
     9841 aatgtatgag tcagcaggca gcggaaatta ccgtcagcca tgtgctcatt cagatgctcg
     9901 ccatgccacg cagtgacctg cgggttatta cccgccaggg cgatattggc atggaagagt
     9961 tgcgccaggc gctgacggta gagaactaca caaccgcccg ttctgcggac agctacccgg
    10021 cgttttcccc gatgctggtt gagtggctta aagagggctg gctgctggcg tcggctgaga
    10081 tgcagcacag cgaactgcgc ggcggcgtgt tgctgctggc cctgctgcat tcgccgctgc
    10141 gttatatacc gcctgctgcc gcccggctgt tgaccggcat taaccgtgac cgtctgcaac
    10201 aggactttgt gcagtggaca caggagtcgg cggaatcagt cgtgccggat gcagacggta
    10261 aaggcgcagg cacaatgacg gacgcctctg acaccctgct tgcccgctat gccaaaaaca
    10321 tgaccgcaga cgcccgtaac ggcaggcttg acccggtact gtgccgcgac cacgaaatcg
    10381 acctgatgat cgacattctc tgccgccgcc gtaaaaacaa cccggtggtg gtgggcgaag
    10441 cgggcgtggg caaaagcgca ctgattgaag ggctggcgct gcgcatcgtg gcaggccagg
    10501 tgccggacaa gctgaaaaac accgatatca tgacccttga cctgggcgca ttgcaggccg
    10561 gggcgtcggt gaagggtgaa ttcgaaaaac gtttcaaagg gctgatggcg gaggtcattt
    10621 cctccccggt gccggtcatt ctgtttatcg acgaagcaca taccctgatt ggcgcgggca
    10681 accagcaggg cgggctggat atctccaacc tgctcaaacc ggcgctggcg cgcggcgagc
    10741 tgaaaaccat cgccgccacc acctggagcg agtacaaaaa atacttcgaa aaagatgccg
    10801 ccctgtcgcg ccgcttccag ttggtgaagg tcagcgaacc caacgctgcc gaagccacca
    10861 ttattctgcg cggtctgtcg gcggtctatg aacagtctca cggcgtgctg attgatgatg
    10921 acgccttgca ggccgctgcg acattaagcg agcgttatct ctccgggcgt cagttaccgg
    10981 acaaagcgat tgatgtgctg gataccgcct gcgcccgtgt ggccatcaac ctgtcgtcgc
    11041 cgccgaagca aatctcggcg ctgaccactc tgagccacca gcaggaggcg gaaattcgcc
    11101 agcttgagcg cgagcttcgc atcggactgc gtaccgacac atcacggatg accgaggtgc
    11161 tggtgcagta tgatgaaacg ctgacggcgc tggatgaact ggaagcggcc tggcaccagc
    11221 agcagacgct ggtccgggag attattgcgc tgcgccagca gttactgggc gtggcagagg
    11281 acgatgcggc gccgttgccg gacgcagata ccgtggagga tacgcagcca gagtcagagt
    11341 cagagtcaga gtcagagtca gagtcagagt cagagtcaga gtcagagtca gagtcagagt
    11401 cagagtcaga gtcagagcag gataataccg gtgccgaacc ggctgatgaa gctggcagcg
    11461 aacagccgga agagaccgct gaaacagttt ccccggtaca acgtctggca catctcactg
    11521 ccgaactgga cgccctgcat aacgaccggt tgctggtttc cccgcacgtc gataaaaaac
    11581 agattgcggc ggtgattgcc gaatggaccg gcgtgccgct taaccgcctg tcgcagaatg
    11641 aaatgtcggt catcaccgac ctgccaaaat ggctcggcga caccatcaaa ggccaggacc
    11701 tggcgattgc cagcctgcac aaacacctgc tgaccgcacg cgccgacctg cgccgtccgg
    11761 gacgcccgct gggcgcgttc ctgctggctg gccccagcgg cgtgggtaaa actgaaaccg
    11821 tcctgcaact ggcagagctg ctctacggcg gtcgccagta cctgaccacc atcaatatgt
    11881 ccgagttcca ggagaaacat accgtctcgc gactgattgg ctcccctccg ggctacgttg
    11941 gctacggtga aggcggcgta ctgaccgaag cgattcgcca gaaaccctac tcggtagtac
    12001 tgctcgatga agtggaaaaa gcgcacccgg atgtgctcaa cctgttctac caggcgttcg
    12061 ataagggcga aatggcagac ggtgaaggcc gcctgattga ctgcaaaaat atcgtcttct
    12121 tcctgacgtc caacctcggc taccaggtaa tagtcgagca tgccgatgac ccggaaacca
    12181 tgcaggaagt actgtatccg gtgctggccg acttcttcaa acctgccctg ctggcgcgta
    12241 tggaagtggt gccgtacctg ccgctgtcga aagagacgct cgccaccatc attgccggga
    12301 aactggcccg cctggataac gtgctgcgca gccgctttgg cgcggaggtg attatagaac
    12361 cggaagtgac ggacgaaatc atgagccgcg tcacccgcgc ggaaaacggc gcgaggatgc
    12421 tggaatcggt catcgacggc aatatgctgc cgccgctctc cctgctgctg ttgcagaaaa
    12481 tggcggcgaa tacggcggtt gcccggattc ggttgtcggc agtggacggc gcatttacgg
    12541 cagacgtgga agatgctcag aacgacgagt ccgtcacaaa ggatgaaacg gttttatgag
    12601 caggttgcgc gttttccggc agacaggatg gtttatcgcg ggcctgatga cgggcttacc
    12661 cgccactgcc gcgcccgcag aagcatcgtc aatggccggt gtggcggtcg ccgtcgccac
    12721 cacgaccccg ccggatgcga cagccacgtt acaggccatg cagtcctgtc ggcgggagtc
    12781 cgcggcgctg gagcggcttg actgctatga ccgcctgctg gcaccgctgt ccccgtcagg
    12841 gtttgacggg gcgctggtca aagccggttt tgtgggcgaa gcctggaccc gcgccacgga
    12901 acaggaaaaa caccgccagg gcaacaccac agagctgctg gtgacgcagg tgccggggga
    12961 gcgcccgacg gtggtgataa ccaccccggc tatcggtcat gttccgccac gcccggtgct
    13021 gatgttcagt tgcgtggaca atatcacccg gatgcaggtg gcgctgatgc accctctgga
    13081 tgtccatgat atcgccgtca ctctgaatgc cgacaaccgg gcattgcgca gccactggtt
    13141 tgtgcgcgag aacggcaccc tgctggagtc cagccggggg ttatccggga ttgatgaaat
    13201 taagcaactg ttcggcgcaa aaacgctgac ggtggatacc ggcgcagaca atgccgccgg
    13261 aaagctgacc tttaacattg acgggctggc aagggcgatt gctcccctgc gcgatgcctg
    13321 ccactgggcg ggagaataaa aatatggcaa tggacttacg cgatccgaat gtctggatat
    13381 cgcacctgct ggaaaacctg ccggaagaga aactggcatc ggcgctgaaa gatgacaacc
    13441 cgaactggga gtatatcgac ggcgaaatcg tcaagctggg atcgctggcc cacagtcaac
    13501 tggatatccc ggaactccag cgccgggggc tggtcattct ggcttcggag agtaaggatt
    13561 ttcgtctgct ggcgcatctg ctgagaaccc tgcaacacgc cggtgatcct catctcgcat
    13621 tgcgcctgct ggcgctgtat gtggagcatt actgggcggt ggctgcgccg cagaatatgg
    13681 cgcataaaaa acgctttgcc agccaggtca ttaaacgctt tgaaacaggt attgaagttt
    13741 tttcacagaa cgccgccaca gcgcagcgcg atgcgctgtc aggggaactg gcaaaactgg
    13801 cgcaatgctg gcagtcacat aacgccccgg aactggcaca ggctactgat gatctttttg
    13861 ccctgtacca gcgtgcgttt aatcgtgcgg caccggctcc tgtccccact ccggcggcct
    13921 ccggtagttc accacagacc accgccacgt ctgaaagcgg cgtgacgcaa cccagtgctc
    13981 cggctcccca aatcgtcatc gacagtcacg acgacaaagc ctggcgcgac acgctgttaa
    14041 aagtggcggc cattttatgt gaacgccagc cggattcacc gcagggctac cgtctgcgcc
    14101 gccatgcgct ttggcagaac atcaccagta cgccccaggc ggaaagcgat ggccgtactc
    14161 cactggctgc ggtctccgcc gatatggtgg cagattacca tgctcagctc ggtagtgccg
    14221 atatggcgct gtggcagcag gtggagaaaa gcgtactgct ggctccttac tggctggatg
    14281 gtcactgcct ttctgcacag acggcgctgc gtctgggtta caaacaggtg gcagacgcca
    14341 tccgcgatga ggtcatccgc ttccttgagc gtctgcccca gcttaccggg ctgctgttta
    14401 atgaccacac accgtttatc agtgagcaga cgaaacaatg gctggcagct tcgcccgacg
    14461 ccaaagttgc accggttgcg caaatcggtg aggaatcgaa ggcagccaga gcctgttttg
    14521 ctgagcaggg tctggaggcg gcgctgcgat atctggacat gctacccgaa ggcgatcccc
    14581 gcgatcagtt tcaccgccag taccttgccg cacagttgac ggaagaggcg gggctggtac
    14641 agcttgcgca gcagcagtac cggatgttgt tcaggatggg attgcagatg atggtggcag
    14701 actgggagcc gtccctgctt gagcagctag aacaaaaatt cacggcagaa caataaaaga
    14761 gaacaggagt ttttgtgttc agattaccaa caccccgact actcagcgga ctcaaatcag
    14821 ccctgcgacc ggcgatgccc cggtttaaag tctctgcttt ctggctgctg atactggcgt
    14881 ggatttttct gctggtgtgg atctggtgga aaggcccgac gtggacgctg tatgaagaac
    14941 agtggctcaa accactggcg aaccgctggc tggcaacggc ggcgtggggg attattgccc
    15001 tgatgtggct taccgtccgg gtgatgaagc gcctgcaaca gcttgaaaaa atgcaaaagc
    15061 aacagcgcga ggaagccgtt gatccgctca gcgtggaact gaacgcccag cagcgttatc
    15121 ttgaccgctg gctgctgcgc ctgcaacgcc atctcgacaa ccgccgtttc ctgtggcagt
    15181 tgccgtggta tatggtcatc ggcccggcgg gcagtggcaa aacgacactg ctgcgcgagg
    15241 ggtttccgtc cgacattatt tatgccccgg agggcgcacg cggcgcagaa caacgcctgt
    15301 acctcacgcc ccatgtcggt aaacaggcgg tgatctttga tatcgacggc acactctgcg
    15361 ctcccgctga tgcggatatc ctgcatcgcc gtctgtggga acatgccctc ggctggctga
    15421 aagaaaagcg cgcgcgccag ccgctgaatg ggattattct gacactcgat ttacccgatc
    15481 tgcttaccgc agacaaacgc cgccgcgagc atctgttaca ggcgctgcgc agccgcttgc
    15541 aggatatacg ccagcatctt cactgccagt taccggttta cgtggtactt acccggcttg
    15601 atttattgca gggttttgcc gccctgtttc agtccctgaa cagacaggat cgcgatgcga
    15661 ttctgggcgt cacgttcacc cgccgtgccc atgaaaatga tgactggcga acagagttga
    15721 atgctttctg gcagacatgg gtggatcgaa tgaatctggc gttgccggat ctgatggtcg
    15781 ctcagactca cacccgcgcg tctttattca gtttttcccg ccagatgcag ggaagccgtg
    15841 aaccgctggt gtcactgctt gagggtctgc ttgatggcga aaatatgaac gtgatgctgc
    15901 gtggtgtcta tctcacctct tcgcttcagc gtggacagat ggatgatata ttcacccagt
    15961 ctgccgcccg ccagtaccgg ctgggcaata acccactggc gtcctggccc ctggtggaca
    16021 ccgcgcctta tttcacccgc agcctgttcc cgcaggcatt actcgcagag cctaatctgg
    16081 caacagagag ccgcgcctgg ctgatacgtt cccgtcgccg cctgacggtt ttctctgcca
    16141 caggcggcgt ggcagcactg ctgctcatca ccggctggca tcactattac aacggtaact
    16201 atcagtctgg catcaccgtg cttaagcagg ccaaagcctt tatggacgtg ccgcctccgc
    16261 agggggaaga tgactttggc aacctgcaac tgccgctcct gaacccggta cgcgatgcca
    16321 cactggccta tggcgactgg ggcgaccgca gccgtctggc cgatatggga ctgtaccagg
    16381 gacgacgtat cgggccttat gtggaacaga cctatctgca actgctggag caacgttacc
    16441 tgccctcgct gtttaacggg ctggtcaaag agctgaacgc cgcgccgccg gagagtgaag
    16501 aaaaactcgc ggtgctgcgc gtgatgcgaa tgctggagga caaaagcgga cgtaacaatc
    16561 aggtggtgaa gcagtatatg gcaaaacgct ggagcgaaaa gttccacggt cagcgcgata
    16621 tccaggcaca actgatgtcc catcttgact acgcgctggc tcatactgac tggcacgcag
    16681 agcgtcaggc gggcgacggt gacgccatca gccgctggac gccatatgac aagcccgtgg
    16741 tatcagcaca gaaagaactg agcaaactgc ctgtctacca gcgggtttac cagagcctga
    16801 aaacgcgggc gctgggcgtt cttcctgccg acctcaatct gcgtgaccag gtagggccaa
    16861 cctttgacca ggtgtttaca tctgccgatg acaacaaact ggttgttcca cagtttctta
    16921 cccgttacgg cctgcaaagc tattttgtaa aacagcgcga tgaactggtt gaactgacgg
    16981 cgatggattc ctgggtactt aaccttaccc gcagcgtgaa atacagtgac gccgaccgcg
    17041 cggaaatcca gcgccagttg accgagcagt atatcagcga ctacaccgcc acctggcggg
    17101 ccgggatgga caatctgaat atccgcaatt ttgagtccat cggacaactg accggggcgc
    17161 tggagcaggt tatcagcggc gaccagcctt tgcagcgggc gctaaccgtg ctgcgtgaca
    17221 acacacagcc aggcgtcttt tctgaaaaac tctctgccaa agaacgggag gaagccctgg
    17281 cagagccgga ttaccagtta ctcacccgcc tcgggcatga attcgccccg gaaaacagta
    17341 ccctggcagt acagaaagac aaagaaagca cgatgcaggc cgtgtatcag caactcaccg
    17401 agttgcaccg ctacctgctg gcaatccaga acgcgcctgt accaggaaaa tcggcgctga
    17461 aagccgtgca gttacggctt gatcagaaca gcagcgatcc gatattcgcc acccgccaga
    17521 tggcaaaaac gctgcctgct ccgctcaacc gctgggttgg caggctggct gaccaggcct
    17581 ggcatgtggt gatggtggag gctgttcatt atatggaagt ggactggcgc gacagcgtgg
    17641 tgaaaccgtt taacgagcaa ctggcaaata actatccgtt taatccgcgt tctgcacagg
    17701 atgcctcact ggatgccttc gaacgcttct ttaaaccgga tggcatactg gataccttct
    17761 accagcagaa cctgaagctg tttatcgata atgacctgag tctggaggat ggcgataaca
    17821 acgtcattat tcgcgaagat attattgcgc aactggaaac tgcgcagaaa atccgtgaca
    17881 tcttcttcag caaacagaac ggtctgggaa catcctttgc cgtggaaacg gtatcgcttt
    17941 caggcaataa acgccgcagt gtactgaacc ttgacggtca gttagtcgat tacagccagg
    18001 gccgtaacta taccgcccat ctggtctggc ctaacaacat gcgcgaaggc aacgaaagta
    18061 agctgacgct catcggcacc agcggcaacg cgccgcgcag tatcagcttc agcgggccgt
    18121 gggcgcagtt ccgcctgttc ggggccggac aactgaccgg agtacaggat ggcaacttta
    18181 ccgtgcgctt tagcgtggac ggtggcgcga tgacctaccg tgtgcatacc gacacggaag
    18241 ataacccgtt cagcggtggg ttgttcagcc agtttggtct gtcagacaca ctgtactgag
    18301 gaggcaggga tgaatagtaa cgtactgaca caaactatcg ttaccggcag tgacccgcgc
    18361 gggctgccgg aattcagcgc catccgcgag gaaataaaca aagccagcca cccgtcacag
    18421 cctgagctga actggaaact ggtggagtcg ctggcgctgg cgatttttaa agccaacggt
    18481 gtggatttac acaccgccac ctactatacg cttgcccgga cacggacaca gggactggcg
    18541 ggattctgcg aaggtgcgga actgctggcg gcaatggtaa gccacgactg ggataagttc
    18601 tggccgcagg gcggcccggc gcgtactgaa atgctggact ggtttaactc ccgaaccggc
    18661 aatattctgc gtcagcaaat ctcctttgcg gaatccgacc taccactgat ctaccgcaca
    18721 gagcgggcat tgcagcttat ctgcgataag ctccagcagg tggaactgaa gcgcgttccg
    18781 cgcgtggaga atctgctcta ttttatgcag aacacgcgta aacggcttgg accccagctg
    18841 aagagtaaca ctgagaacgc cgcacagacc acggtcagaa cgctgattta tgccccggaa
    18901 acacaggcat cttccacacc agaagcggta gtgcctcccc tgcccggcct gcctgagatg
    18961 aaagtggaag ttcgcagtct gacagagaat cccccacagg ccagtgtgat aaatcaaggc
    19021 agtacggtaa gagggtttat cgcagggatc gcctgttcag tggctgtcgc ctcagcattg
    19081 tggtggtggc aggtctatcc ggtgcagcag caactgttac aggttaacga caccgctcag
    19141 ggcgcagcaa cggtgtggat ggcctcacct gaactcgaaa actatgagcg caggctgcaa
    19201 caacttcttg atacctcccc ggtacagccg ctggaaaccg ggatgcagat gatgcgtgtt
    19261 gccgacagtc gctggccgga aagcctgcaa cagcaacagg cctcgacaca atggaatgag
    19321 gcactcaaaa cccgcgcaca gagtagcccg cagttgcgtg gctggttgca gacccgccag
    19381 gacttacatg cttttgcaga tctagtgatg cagcgcgaga aagagggact aaccctttcc
    19441 tatatcaaaa atgtcatctg gcaggcggag cggggactgg ggcaggaaac acccgttgag
    19501 tctctgttga cgcagtacca tgatgcccgt gcgcagaagc agaatacaga tgcgctggaa
    19561 aaacaaatta atgagcgact cgaaggcgtg ttaagccgct ggctgctgct gaagaataac
    19621 gtcatgccag aggcggcaac cggtaccacg gccgaaaaat aattatttaa ttaaaggaga
    19681 ttatcatggc aaatataagt tatttatctt tgagtggaga gacacaaggg ctaatttcag
    19741 caggttgctc aacgcttgat tctgtcggaa acaaagcgca gccagaacat aaagatcaga
    19801 tcatggttta tgcgttaatg cattccatct caagaagtca aaatgtcaat catcatgaat
    19861 taattatcac caaaccggtt gataaatcct caccattgct ggcaaaagca cttagtgaca
    19921 atgaaaaaat ggcaatatgt gaatttatac tctaccgaac cagtaaagcg ggtatttacc
    19981 agccttatta taaaataaat ctgtcaaaag cccgaatatc aagtattgat tttgtcacac
    20041 cgcatgctgt cctggaaaaa gaactggaac cacaggagag aattgccttt atttatgaag
    20101 atatttcctg ggagcatacg ttagccggta cgaatgcaat gagtaaatgg caggatcgtg
    20161 tacagtaact tactgtaata acataataaa ttactattgc ggagagataa aatggctggt
    20221 ttaaggaata acaacaacac acagaatgca cagtgggctg attatgtggg tgacattctt
    20281 cggggggctc agccgataaa ccagctagta cctcagcacc cttatcttaa cgacgtccca
    20341 ctcattgatg agttaaggca tcagaacact catcatgtta ttctcttgac acttgatgtt
    20401 gcaaaaaaaa atactcagcc caataacatc atttgattac attcatttta tcactacaca
    20461 tccttcaggt ataaaagata cactcgcctg gttagttaac gcgagtaaat taatgactga
    20521 gtttgatgac aatgggaaaa ttatatttaa ccttaatgcc ttaaagtata caaaagcaag
    20581 ttactttgaa atacttggag agaaatatat aaaaatcaca acatccagcc cctggctttt
    20641 agaaaagctc ggtaaatata ttttctcttc acgagcgcct caagttctgg aactcgctat
    20701 tggctggcga ggagctttat ctgaatcaat aaaaggagtt aagttctgta tctggttttc
    20761 agtagcctgg agaaccatag aatttattat gagttcagag cgagatctgg ttaattttct
    20821 tggcgatttt tcaatggatg tggccaaagc agttatagcc ggtggtgttg caaccgctat
    20881 tggaagcctg gcttcttttg cctgtgttag ctttggcttt ccagtaattc ttgtcggagg
    20941 agcaatttta ctgacaggga tagtgtgtac agttgtttta aatgaaatcg atgctcaatg
    21001 ccatttatca gaaaaattaa aatatgcaat tagagatgga ctaaaacggc aacaggaact
    21061 tgataaatgg aaaagggaaa acatgactcc atttatgtat gttcttaaca ctccacccgt
    21121 gatatgagga ttaaccatgc gtttacatgt taaattaaaa gagtttcttt cgatgttttt
    21181 tatggccata ttatttttcc ctgc
//
LOCUS       DAPGWB010000075        20828 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.075, whole genome shotgun sequence.
ACCESSION   DAPGWB010000075 DAPGWB010000000
VERSION     DAPGWB010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20828
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.075"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(122..1771)
                     /gene="actP"
                     /locus_tag="RHX79_002662"
     CDS             complement(122..1771)
                     /gene="actP"
                     /locus_tag="RHX79_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation/acetate symporter ActP"
                     /protein_id="HDV2197815.1"
                     /translation="MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVV
                     FTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYD
                     GLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVAL
                     YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFG
                     ASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTA
                     GLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAG
                     HLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVF
                     KKGATEREELRVSKITVLILGVIAIILGVLFENQNIAFMVGLAFAIAASCNFPIILLS
                     MYWSKLTTRGAMMGGWLGLITAVVLMILGPTIWVQILGHEKAIFPYEYPALFSISVAF
                     LGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVEQGRAH"
     gene            complement(1768..2082)
                     /locus_tag="RHX79_002663"
     CDS             complement(1768..2082)
                     /locus_tag="RHX79_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HDV2197816.1"
                     /translation="MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLI
                     AFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQ
                     AS"
     gene            complement(2283..4241)
                     /gene="acs"
                     /locus_tag="RHX79_002664"
     CDS             complement(2283..4241)
                     /gene="acs"
                     /locus_tag="RHX79_002664"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HDV2197817.1"
                     /translation="MSQIHKHTIPANIADRCLINPQQYEAMYQQSINVPDTFWGEQGK
                     ILDWIKPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDA
                     SQSKHISYKELHRDVCRFANTLLELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHS
                     VIFGGFSPEAVAGRIIDSNSRLVITSDEGVRAGRSIPLKKNVDDALKNPNVTSVEHVV
                     VLKRTGGKIDWQEGRDLWWHDLVEQASDQHQAEEMNAEDPLFILYTSGSTGKPKGVLH
                     TTGGYLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVP
                     NWPTPARMAQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINP
                     EAWEWYWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVD
                     NEGNPLEGATEGSLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDG
                     YYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHNIKGQAIYAYVTLN
                     HGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTS
                     NLGDTSTLADPGVVEKLLEEKQAIAMPS"
     gene            4634..6070
                     /gene="nrfA"
                     /locus_tag="RHX79_002665"
     CDS             4634..6070
                     /gene="nrfA"
                     /locus_tag="RHX79_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HDV2197818.1"
                     /translation="MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNET
                     FAPQHPDQYLSWKATSEQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVR
                     ETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGC
                     ADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYF
                     DGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHG
                     KNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQ
                     SINDLKIKVEDQLVHAHFEAKAALDADATEAEMKPIQDDIRHAQWRWDLAIASHGIHM
                     HAPEEGLRMLGTAMDKAADARTKLARLLATKGITHEIQIPDISTKEKAQQAIGLNMEQ
                     IKAEKQDFIKTVIPQWEEQARKNGLLSQ"
     gene            6115..6681
                     /gene="nrfB"
                     /locus_tag="RHX79_002666"
     CDS             6115..6681
                     /gene="nrfB"
                     /locus_tag="RHX79_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418495.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HDV2197819.1"
                     /translation="MSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRN
                     PDAACLDCHKPDIEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEP
                     MYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRI
                     KICVDCHSDQRTNPNFNPASVPLLKEQP"
     gene            6678..7349
                     /gene="nrfC"
                     /locus_tag="RHX79_002667"
     CDS             6678..7349
                     /gene="nrfC"
                     /locus_tag="RHX79_002667"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HDV2197820.1"
                     /translation="MTWSRRQFLTGVGVLATVSGTAGRVVAKTLNINGVRYGMVHDES
                     LCIGCTACMDACREVNKVPEGVSRLMIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVD
                     VCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL
                     QAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKY
                     GEVSQ"
     gene            7346..8302
                     /gene="nrfD"
                     /locus_tag="RHX79_002668"
     CDS             7346..8302
                     /gene="nrfD"
                     /locus_tag="RHX79_002668"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HDV2197821.1"
                     /translation="MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRFYPQ
                     AGGADSTLLRTTLIVGPGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQ
                     LYMVVLVLWLAKIFEHDLLALQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLG
                     AYTGFLLSALKSYPFLNNPILPVLFLFSGISSGVAVALIAMAIRQRKNPHSTEAHFVH
                     RMEIPVVWGEIFLLVAFFVGLALGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPM
                     LLKPWVNRSSGIPAVLAACGASLVGVLMLRFFILYAGQLTVA"
     gene            8322..10040
                     /locus_tag="RHX79_002669"
     CDS             8322..10040
                     /locus_tag="RHX79_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014640253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HDV2197822.1"
                     /translation="MDVFLPEVGFLALLLSLGVNVLTPLTAFAGVRLRWPAMMRLTCI
                     GILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLW
                     VLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEG
                     RDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGW
                     SALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQREIFRH
                     WSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGW
                     RARDGGAVVRFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPY
                     FNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGIVVSSVSRQEISLN
                     LQPGQQVTLAGYTFRFERLDLQAKGNYTSEKAIVALFDHQQRIGELMPERRFYEARRQ
                     QMMEPSIRWNGIHDWYAVMGEKTGADRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWR
                     GRKRDE"
     gene            10033..10416
                     /gene="nrfF"
                     /locus_tag="RHX79_002670"
     CDS             10033..10416
                     /gene="nrfF"
                     /locus_tag="RHX79_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HDV2197823.1"
                     /translation="MNKGLLTLLLLFTCFARAQVVDTWQFANPQQQQQALNIASQLRC
                     PQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQT
                     LVLWALPVVLLLLMALILWRVRAKR"
     gene            10413..11009
                     /gene="nrfG"
                     /locus_tag="RHX79_002671"
     CDS             10413..11009
                     /gene="nrfG"
                     /locus_tag="RHX79_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfG"
                     /protein_id="HDV2197824.1"
                     /translation="MKEPKIPVKMLTTLTILMVFLCVGSYLLSPKWQAVHAEYQRQRD
                     PLHQFASQQTPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYNNSLLAYRQALQL
                     RGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANY
                     AQAIELWQKVMDLNSPRINRTQLVESINMAKLLQRRSD"
     gene            11351..12664
                     /gene="gltP"
                     /locus_tag="RHX79_002672"
     CDS             11351..12664
                     /gene="gltP"
                     /locus_tag="RHX79_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate:proton symporter GltP"
                     /protein_id="HDV2197825.1"
                     /translation="MKSIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPA
                     GDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITL
                     ANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEM
                     LPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVT
                     VANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYS
                     TASSESVLPRIIEKMEAYGAPASITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGID
                     LSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMA
                     RTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ"
     gene            complement(12742..13431)
                     /locus_tag="RHX79_002673"
     CDS             complement(12742..13431)
                     /locus_tag="RHX79_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDV2197826.1"
                     /translation="MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADS
                     WFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSK
                     EGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKA
                     DDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDT
                     GCEEFEKLTNG"
     gene            complement(13525..15672)
                     /gene="fdhF"
                     /locus_tag="RHX79_002674"
     CDS             complement(13525..15672)
                     /gene="fdhF"
                     /locus_tag="RHX79_002674"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(15253..15255),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HDV2197827.1"
                     /translation="MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLK
                     GYYGWDFINDTQILTPRLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDA
                     IQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNA
                     INEIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIAL
                     KNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSAS
                     EIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRG
                     QNNVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVESLPAHTGYRISELPHRAAH
                     GEVRAAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFMTKTASAADVILPSTSWGE
                     HEGVFTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHL
                     CPDFYGATYEKMGELGFIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPI
                     DKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEA
                     LVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGACNELVTENLSPITKTPEYKYCA
                     VRVEPIADQRAAEQYVIDEYNKLKTRLREAALA"
     gene            complement(15870..17336)
                     /gene="mdtP"
                     /locus_tag="RHX79_002675"
     CDS             complement(15870..17336)
                     /gene="mdtP"
                     /locus_tag="RHX79_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MdtP"
                     /protein_id="HDV2197828.1"
                     /translation="MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKL
                     ADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLLDA
                     GSQLQVAALGMLNRQRVSANGFLSPYAMDAPALGMDGPYYTEATVGLFAGLDLDLWGV
                     HRSAVAAAIGAHNAALAETAAVELSLTTGVAQLYYSMQASYQMLDLLEQTRDVIDYAV
                     KAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQITETRESLRALIGAGASDMPE
                     IKPVALPRVQTGIPATLSYELLARRPDLQAMRWYVQASLDQVDSARALFYPSFDIKAF
                     FGLDAIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLNANLEGTRAASNMMIERYNQSVL
                     NAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAEAAYQRGLTSRLQATEARLPV
                     LAEEMSLLMLDSRRVIQSIQLMKSLGGGYQAAPVVEKK"
     gene            complement(17333..19384)
                     /gene="mdtO"
                     /locus_tag="RHX79_002676"
     CDS             complement(17333..19384)
                     /gene="mdtO"
                     /locus_tag="RHX79_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter permease subunit
                     MdtO"
                     /protein_id="HDV2197829.1"
                     /translation="MSALNSLPLPVVRLLAFFHEELSERRPGRVPQTVQLWVGCLLVI
                     LISMTFEIPFVALSLAVLFYGIQSNAFYTKFVAILFVVATMLEIGSLFLIYKWSYGEP
                     LIRLIIAGPILMGCMFLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCI
                     VVGLYPTLLMTLIGVLWFPSRAISQMHQALNDRLDDAISHLTDSLAPLPETRIEREAL
                     ALQKLNVFCLADDANWRTQSAWWQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKL
                     ASEINKLQHAVAEGQCWQSDWRISESEAMAARECNLENICQTLLQLGQMDPNTPPTPA
                     AKPPSMAADAFTNPDYMRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVG
                     SSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIFLLGAWIATSSERS
                     SYIGTQMVVTFALATLENVFGPVYDLVEIRDRAMGIIIGTVVSAVIYTFVWPESEART
                     LPQKLAGTLGMLSKVMRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQRVALERQLD
                     SEERALLIERSQTVIRQGRDILHAWDATWNSAQALDNALQPDRAAQFADALEKYAAGL
                     ATALSRSPQITLEETPASQAILPTLLKQEQHVCQLFARLPDWTAPALTPATEQAQGAT
                     Q"
     gene            complement(19384..20415)
                     /gene="mdtN"
                     /locus_tag="RHX79_002677"
     CDS             complement(19384..20415)
                     /gene="mdtN"
                     /locus_tag="RHX79_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter periplasmic adaptor
                     subunit MdtN"
                     /protein_id="HDV2197830.1"
                     /translation="MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYA
                     SADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPFEANLAKAEASLAALDKQI
                     MLTQRSVDAQQFGADSINATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTA
                     QRAAEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTKLHLEMATVRAPFDGR
                     VISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKT
                     FEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGA
                     SAVANLEPQ"
     gene            complement(20434..20709)
                     /locus_tag="RHX79_002678"
     CDS             complement(20434..20709)
                     /locus_tag="RHX79_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197831.1"
                     /translation="MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWF
                     FCAIASLILMLITRRVIQRANINLAFVGIIYTALFALYAMLFWLAFF"
BASE COUNT         4695 a         5516 c         5703 g         4914 t
ORIGIN      
        1 ctacgactgt caaaaatcgc tcatttttta atgagtttat ttgtttaata ttatgggaaa
       61 aggtgatgca tgctggagag gaagagtatt ccccggtcag gcgaccgggg aaggggagag
      121 attaatgtgc gcggccttgc tcaacgccaa agccggtctg ggagcggata aactgtgcac
      181 ggaacagttc acgctcgcgc gcaccttccg ctgagttatc ggttgccgag aagaaccaga
      241 tgccgaggaa tgccacgctg atagagaaca gcgccgggta ttcatacggg aagatggctt
      301 tttcgtgacc aaggatctgt acccaaatcg tcgggccgag gatcatcagt actactgcgg
      361 taatcagccc cagccagcca cccatcatcg cgccacgcgt ggtcagtttc gaccagtaca
      421 tagaaagcag aatgatcggg aagttacagc tcgccgcgat ggcaaacgcc agccccacca
      481 taaaggcgat gttctgattc tcaaacagca cgccgaggat aatggcaatc acacccaaaa
      541 tcagcacggt gattttcgat acccgcagtt cttcacgttc ggtcgcgcct tttttgaaga
      601 cgttagcgta caggtcatgc gaaaccgctg atgcgcccgc cagcgtcaga cccgcaacca
      661 ccgcgaggat agtggcgaaa gcaaccgctg aaataaaacc gaggaacagg ttgccgccca
      721 ctgcattcgc caggtgaacg gccgccatgt tgttaccacc aatcagatgg cccgccgcgt
      781 ctttatattc cggattcgca ccaacaagca tgatcgcgcc gaagccgata ataaaggtca
      841 gaatatagaa gtagcccata aatccggtgg cgtagaacac gctcttacgt gcttcgcggg
      901 catcgctgac tgtaaagaag cgcatcagaa tgtgcggcaa gcccgccgta ccaaacatca
      961 gtcccagccc cagagagagc gcggagatcg gatctttcac cagtccgccc ggtttcatga
     1021 tgtcgacacc tttcgggtgt accgccatcg cttcgctgaa cagattgttg aagctaaagc
     1081 cgacgtgttt catcaccata aaggccataa agctggcacc gaacagcaac agcacggctt
     1141 tgataatctg tacccaagtg gtcgccagca tgccgccgaa caggacgtac atcatcatca
     1201 gcacgccgac cagcaccacc gcaatgtgat agttaaggcc aaacagcagc tcgatcagtt
     1261 tacctgcgcc caccatctgg gcgataaggt aaagcgccac caccaccaga gaaccacagg
     1321 ccgaaagaat acgaatcggc ccttgtttca gacggtaaga ggccacatcg gcaaaggtgt
     1381 agcgccccag gttacgcaga cgttcggcaa tcaggaacaa aatgatcggc cagcccacca
     1441 ggaagcccag cgagtaaatt aagccgtcat agccggaggt aaacaccagc gcggagatcc
     1501 ccaagaatga ggcggcggac atatagtccc cggcaatcgc cagcccgttc tggaagccag
     1561 tgatattgcc gcctgcggtg tagtagtcgc tacgagaacg tacgcgtttt gatgcccagt
     1621 aggtaatgcc gagcgtaaac acgacgaaaa tcaggaacat aataatcgcc tgccagttcg
     1681 ttggctggcg ctctacggcc ccgctaatag catccgcggc gttagctgcg aaagggagtg
     1741 tggcggcaag cgccgtcaga actcttttca tgatgcttgt acctcatgca ggacttcatt
     1801 attaagacgg tcgaattcgc cgttcgcccg ccagatgtag ataccggtga gaacaaagga
     1861 gatcacaatc actccaacac caattggaat accgcgtgtg acgctggtgt tcggattcag
     1921 cggcgtgccc agccagccgg gcgcgaaggc gatcagtaaa ataaagccga tataaactgc
     1981 cagcataata atcgacagga tggtggcaaa ccgttgccgt ttttcgacta actccctgaa
     2041 atgcgcattg tcttctatcc gctgataaat agtgccattc atcacagatt ctccagaggt
     2101 aatgtaggga ttgttttaat tcccgctccc ttatgggaga aggttaacgc tcgggtaacc
     2161 cttgccgaat gtaggccgga taaggcgtta tatgccgcat ccggcaatca atgcctgatg
     2221 cgacgctgtc gcgtcttatc aggcctacaa accgttaccg attcgcatcc ggcaattgtg
     2281 ggttacgatg gcatcgcgat agcctgcttc tcttcaagca gcttctcgac aacgccagga
     2341 tcggcaagcg tcgaggtatc gcccaggttg ctggtatcgc ccgccgcaat tttgcgcaga
     2401 atacggcgca taattttgcc ggaacgggtt ttaggcaggg agtcggtcca gtgcagcacg
     2461 tctggcgtcg ccagcgggcc aatctcttta cgcacccagt tgcggacttc tgcgtacagt
     2521 tctggtgacg gttcctcccc gtgattaagc gtgacgtagg cgtagatcgc ctgaccttta
     2581 atattgtgcg gaatacctac tacggcggct tcggcaatct tcggatgcgc caccagcgcc
     2641 gactcaatct ctgccgtccc cagacggtga ccggagacgt tcagcacgtc gtccacacgc
     2701 ccggtgatcc agtaatagcc atcttcatcg cgacgcgcgc cgtcgccgct gaaatacata
     2761 tttttgaagg tggagaagta ggtctgttca aaacgttcgt gatcgccaaa cagcgtacgc
     2821 gcctgacccg gccaggagtc ggtgatcacc aggctgcctt cggtagcgcc ttccagcggg
     2881 ttaccttcgt tatcgaccag cgccggttgc acgccgaaga acggacgtgt tgccgaaccg
     2941 gctttcagct cggtagcgcc aggcagcggc gtgatcatga aaccgccagt ttcggtctgc
     3001 caccaggtat cgaccaccgg acatttctcg ttgccgattt ttttccagta ccactcccac
     3061 gcttctgggt taattggctc gcccacggaa ccgagaatgc gcagcgacga acggtcggta
     3121 ccctcgatcg ctttatcgcc ttccgccatc agcgcgcgga tcgccgtggg tgcggtatag
     3181 agaatattga cctgatgctt gtccaccacc tgcgccatac gggcaggcgt cggccagttg
     3241 ggtacgcctt caaacatcag cgtggtcgca ccgcaggcca gcgggccgta cagcaagtaa
     3301 ctgtgtccgg tcacccagcc cacatcggcg gtgcaccagt agatatcacc cggatgataa
     3361 tcaaagacat atttaaaggt cagcgccgcg tacaccagat aaccgccggt agtatgcagc
     3421 acaccttttg gcttaccggt agaaccggag gtgtagagaa taaacagcgg atcttcggcg
     3481 ttcatctctt ccgcctggtg ctgatcgctc gcttgctcaa ccaggtcgtg ccaccacagg
     3541 tcgcgccctt cctgccagtc aattttcccg ccagtacgct tcagtaccac cacatgctct
     3601 acgctggtga cgttcgggtt tttcagcgcg tcatcaacgt ttttcttcag cggaatactg
     3661 cgcccggcac gcacaccttc gtcggaagtg atcaccagtc gtgagttgga atcaataatg
     3721 cgcccggcaa cggcttccgg cgagaagccg ccgaaaatca ccgaatgcac cgcgccaata
     3781 cgggcgcagg ccagcatcgc aaccgcggct tccggcacca tcggcatata aatcgccacc
     3841 acatcacctt ttttaatgcc cagctcgagc agggtattgg cgaagcggca gacgtcgcgg
     3901 tgcagctctt tatagctgat atgtttgctc tggctggcgt cgtcgccttc ccagatgatg
     3961 gcggtacgat cgccgttttc ttgcagatgg cggtcaaggc agtttgccgc cagattcagc
     4021 gtgccgtcct cgtaccattt aatggacaca ttaccggggg caaaggaggt gtttttcact
     4081 ttctggtaag gtttgatcca gtcaagaatt tttccctgtt cgccccagaa ggtatcaggt
     4141 acgttaatag attgttgata catcgcctcg tactgctgag ggtttatcag gcaacggtct
     4201 gcgatgttgg caggaatggt gtgtttgtga atttggctca tgcttttgtt ctccttgtag
     4261 gatgttaata atatgtggca taagcgttaa atgtaggggt attggcagtt ttgtttagta
     4321 tttgggcgac agatcacgca aaagtagaat tgtgcaaata aacggcaggg taatttttga
     4381 aggtcaccaa caaaagttga ttaattcttt gaggaacatg cagttatgca tgctgttgaa
     4441 aaagaggaag atactgacta actctaaagt ggtattttac atgcacttac aattgattaa
     4501 agacaacatt cacagtgtgg ttatttgtta cacatagggg cgagcaatgt catgacagtg
     4561 taggtgcggt tactgtcgtg aaaaacaata aaaaccgcca ttgcaacaat ggcgcaattc
     4621 ggatgaagcc cctatgacaa ggataaaaat aaacgcacgc cgtatcttca gcttattgat
     4681 tccttttttc tttttcactt ctgttcacgc tgaacaaacg gcagctcccg caaaacctgt
     4741 aactgtggaa gcgaagaatg aaacctttgc cccgcagcat cccgatcaat atctctcctg
     4801 gaaagccacc tcggaacagt cagagcgtgt tgacgccctg gcggaagatc cacggctggt
     4861 gatcctgtgg gcggggtatc ccttctcgcg cgattacaac aagccgcgtg gacatgcctt
     4921 tgctgtgacc gatgtgcgtg aaaccctgcg taccggtgcg ccgaaaaacg ctgaagatgg
     4981 tccgctaccg atggcatgct ggagttgtaa aagcccggat gtggcgcgtc tgatccagaa
     5041 agacggcgaa gatggctact tccacggtaa atgggcgcgc ggcggtccgg aaatcgtcaa
     5101 caacttaggt tgtgccgatt gccataacac cgcctcacca gagttcgcca aaggcaagcc
     5161 ggagttaacc ctttcccgtc cgtatgcggc tcgcgcgatg gaagccattg gtaaaccttt
     5221 tgagaaagcc ggacgtttcg accagcaatc gatggtttgc ggtcagtgcc atgtggagta
     5281 ttacttcgac ggcaaaaaca aagcggttaa attcccgtgg gatgacggca tgaaagtcga
     5341 aaatatggag cagtattacg acaaaattgc cttctctgac tggactaact ccctgtcgaa
     5401 aacgccaatg ctgaaagcgc agcacccgga gtatgaaacc tggacagcgg gcattcacgg
     5461 taaaaacaac gtgacctgta tcgactgcca tatgccaaaa gtgcagaacg ccgaaggcaa
     5521 actctacacc gaccataaaa ttggtaatcc gtttgataac ttcgcccaga cttgtgcgaa
     5581 ctgccatacc caggacaaag ctgccttgca aaaagtggtc gcggaacgta agcagtcgat
     5641 taacgacctg aaaatcaagg ttgaagatca actggttcac gctcacttcg aagcgaaagc
     5701 agcgctggat gcagacgcga cggaagctga aatgaagcca attcaggacg atatccgtca
     5761 tgcccagtgg cgctgggatc tggcaatcgc ttcccacggc attcatatgc acgcaccgga
     5821 agaaggttta cggatgctcg gtacggcgat ggataaagcg gcggatgcac gcaccaaact
     5881 ggcgcgcctg ctggcgacca aaggcatcac ccatgaaatc cagatcccgg atatctcgac
     5941 caaagagaaa gcccagcagg ccattggcct gaacatggaa caaatcaagg ccgagaagca
     6001 ggacttcatc aaaacggtga tcccgcagtg ggaagaacag gcacgtaaaa atggtctgtt
     6061 aagccaataa cccagttccg cctcgcaagg ggcggaaaac acaatggagt gaatatgagc
     6121 gtattacgtt cgttattaac tgctggggtg ctggcgtcgg gcctgttgtg gagcctgaac
     6181 ggaattaccg ctacccctgc ggcgcaggca tctggtgatc gctacgaagt tacccagcag
     6241 cgtaacccgg atgccgcctg tctggactgt cataagccag atatcgaagg tatgcatggc
     6301 aaacatgctt ccgttatcaa cccgaataac aaactgccgg tcacctgcac caactgtcac
     6361 ggccagccat caccgcaaca ccgcgaaggg gtgaaagatg tgatgcgctt taacgagccg
     6421 atgtacaagg tcggagagca gaacagcgtc tgtatgtcct gtcatctgcc ggaacagttg
     6481 caaaaagcgt tctggccgca cgatgtccac gtaaccaaag tggcgtgcgc cagctgccat
     6541 tccctgcatc cacagcaaga tacgatgcag acgttaagtg acaaaggacg gattaagatt
     6601 tgcgtcgatt gccacagcga tcagcgcacc aatccgaact ttaacccggc gtctgttccg
     6661 ttgcttaagg agcagccatg acctggtctc gtcgccagtt tctcaccggc gtcggcgtgc
     6721 tggcaaccgt cagcggcacc gcagggcgcg tggtggcgaa aacgttgaat atcaatgggg
     6781 tgcgttacgg catggtgcat gacgagtcgt tatgcatcgg ctgtaccgcc tgtatggatg
     6841 cttgtcggga agtgaacaag gtgccggaag gcgtctcgcg cctgatgatt attcgtagcg
     6901 agccgcaggg cgaatttcct gatgtgaaat atcgcttctt ccgtaagtct tgccagcact
     6961 gcgatcatgc gccgtgcgtt gacgtctgcc cgaccggtgc gtcttttcgt gatgccgcta
     7021 gcgggattgt cgatgttaat cctgatctct gcgtcggttg tcagtactgc atcgccgcct
     7081 gtccgtaccg cgtgcgcttt atccatccgg tcacgaagac ggcggacaaa tgcgatttct
     7141 gccgtaagac caatttgcag gccggtaagc tgcccgcgtg cgttgaggct tgcccgacga
     7201 aggcgctgac gtttggcaat ctggacgatc ctaacagtga gatttcgcaa ctgctgcgcc
     7261 agaagcctac ttaccgctac aagctggcgc tgggaaccaa accgaagctg taccgcgtac
     7321 cgtttaaata cggggaggtg agccaatgac gcagacttcc gcatttcatt ttgaatcgct
     7381 ggtgtgggac tggccgattg ccatctacct gtttttgatt ggtatttctg ccggtctggt
     7441 gacgctggcc gtgctgttac gtcgcttcta cccgcaggcg ggcggtgcag acagcacgtt
     7501 gctgcgcacc acgctgattg tcggacctgg cgcggtgatc ctcggtctgt tgatcctcgt
     7561 cttccacctg acaagaccgt ggaccttctg gaagctgatg ttccactaca gttttacctc
     7621 ggtgatgtcg atgggggtga tgctgtttca gctctacatg gtggtgctgg tgctgtggct
     7681 ggcgaaaatc tttgaacatg atttgcttgc cctgcaacaa cgctggttgc cgaagctggg
     7741 gatcgtgcaa aaggttctga gcctgctgac gcccgttcat cgcggactgg aaacgctgat
     7801 gctggtgttg gcggtgctgc tgggggctta taccggcttt ctgctgtcgg cgctgaaatc
     7861 gtatccgttc ctcaataacc cgatcctgcc ggtgctgttc ctcttctccg gcatctcgtc
     7921 cggtgtggcg gtagcgctga tcgccatggc gatacgccaa cgcaaaaatc cgcattccac
     7981 ggaagcgcac tttgttcacc gtatggaaat ccccgtggta tggggtgaaa tcttcctgct
     8041 ggtggcgttt tttgtcggtc tggcgctggg cgatgacggt aaagtgcgtg cgctggtggc
     8101 ggcattaggt ggcggtttct ggacgtggtg gttctggctt ggtgtcgccg ggctggggct
     8161 gattgtgcca atgttgctca aaccgtgggt caatcgcagt tccggcattc ctgccgtgtt
     8221 ggcggcgtgt ggggccagtc tggtcggcgt gttgatgctg cgctttttca ttctctacgc
     8281 cggacagttg acggtggcgt aagccagaaa agaggtggtt tctggacgta ttccttcctg
     8341 aagtcggttt tctggcgttg ttgttaagtc tcggggtcaa cgtgttgacc ccgttgacgg
     8401 cctttgcggg agtgcggttg cgctggcctg ccatgatgcg actcacttgc atcggcattc
     8461 tggcgcagtt cgcgctcctg ctgctcgcct ttggcgtact gacgtattgt tttctcatca
     8521 gcgatttctc ggtcatttat gtcgcgcaac atagctatag cctgctgtcg tgggaactca
     8581 agctggcagc ggtgtggggc ggccatgaag gttcgctgct gctttgggtg ctgctgcttt
     8641 ccgcctggag cgcgctgttt gcctggcatt atcggcagca aaccgatccg ctatttccgc
     8701 tgacgttagc cgttttatct ctcatgctcg ccgcactgct actgtttgtg gtgctgtggt
     8761 ccgatccctt cgtgcggata tttccaccag caatcgaagg ccgcgatctc aatccgatgc
     8821 tgcaacatcc cggtcttatc tttcatccac cgctgcttta ccttggctat ggcggtttga
     8881 tggtagcggc gagcgtggcg ctggcgagtt tactgcgcgg cgagtttgat ggtgcctgcg
     8941 ccagaatttg ttggcgctgg gcactacctg gctggagcgc attaacggcg gggatcatcc
     9001 tcggttcctg gtgggcctat tgcgaactgg gctggggcgg ctggtggttc tgggatccgg
     9061 tggaaaacgc ctctttatta ccctggcttt ctgccactgc gctgctgcac agtttgtccc
     9121 tgacacgcca gcgggagatt ttccgccact ggtcgctgtt gctggcgata gtaactctga
     9181 tgctgtcgct gctgggcacc ttaattgtcc gttctggcat tctggtttcg gttcatgcgt
     9241 tcgcactgga taacgtccgc gccgtgccgt tgttcagcct gtttgcactg attagccttg
     9301 cgtctctggc tctgtatggc tggcgagcgc gggacggtgg tgcggtggtg cgtttttcgg
     9361 ggttatcgcg ggaaatgtta atcctcgcta cgctgttgct gttttgcgca gtgctactga
     9421 tcgtgctggt gggaacgctt tatccgatga tttacggcct gctgggctgg ggacgcctct
     9481 ccgttggcgc gccgtatttt aaccgcgcga cgttaccgtt tggcctgttg atgctggtgg
     9541 tgattgtgct ggcgacgttt gtctctggca aacgcgtgca gcttccggcg ctggtagctc
     9601 atgcgggcgt gctgttattt gccgcgggga tcgtggtttc cagcgtcagc cgtcaggaga
     9661 tcagcctgaa tttacagccg ggtcagcagg tgacgctggc aggatacacc ttccgttttg
     9721 agcgcctcga tctgcaagcc aaaggcaatt acaccagcga aaaagcgata gtggcactgt
     9781 ttgaccatca gcaacgcatt ggtgaactga tgccggagcg gcgtttttac gaagcacgtc
     9841 gtcagcaaat gatggaaccg tcaattcgct ggaacggcat ccatgactgg tatgcggtca
     9901 tgggtgaaaa aaccggagcg gatcgttacg cttttcgctt gtatgtacaa agcggtgtgc
     9961 gctggatctg ggggggagga ttgttgatga ttgcgggcgc attgttaagc ggatggcggg
    10021 ggaggaagcg cgatgaataa aggacttctc acgctactgc tgttatttac ctgttttgcg
    10081 cgcgctcagg tcgtagacac ctggcaattc gccaatccgc aacaacagca acaggcgtta
    10141 aatattgcca gccagttacg ttgtccgcag tgccagaatc aaaacttact ggaatccaac
    10201 gcgccggtgg cagtcagtat gcgccatcag gtttacagca tggtggcgga ggggaagaac
    10261 gaagtcgaaa tcattggctg gatgaccgaa cgctacggag attttgttcg ctataaccca
    10321 ccgttaacgg gtcagacgct ggtgttgtgg gcgctgccag tggtgttgtt actgctgatg
    10381 gcactgatcc tctggcgagt gagggcgaag cgatgaaaga gcccaaaata ccggtgaaaa
    10441 tgctgacaac actcacgatt ttgatggtat ttctctgtgt cggcagttat ctgttaagtc
    10501 caaaatggca ggcggtacat gcggaatatc agcgtcagcg cgatccgcta catcagtttg
    10561 ccagccagca aaccccggaa gcgcagcttc aggcattgca ggataaaatc cgcgctaatc
    10621 cacaaaacag cgaacaatgg gcgttactgg gcgagtacta tctgtggcaa aacgattaca
    10681 acaattcgct gctggcgtac cgtcaggcgt tgcaactacg tggtgagaac gctgaactgt
    10741 atgcggcgct ggcgacggtg ctttattacc aggccagcca gcatatgacc gcccagactc
    10801 gcgcaatgat cgacaaagcc ctcgcgctgg actctaacga aatcaccgct ctgatgctgc
    10861 tggcttccga tgcgtttatg caggcgaatt acgcgcaagc catcgaacta tggcaaaaag
    10921 tgatggatct caactcaccc cggatcaacc ggacacagct ggtcgagtcg attaatatgg
    10981 cgaaattgtt gcagcggaga tcagattaat catctggtga tgaagattat gttattgagt
    11041 tgtataaaaa ataatcgaat gaacatatgc caaaaataat caccaatcag tattattgca
    11101 gattaaacaa ataaaaatct ttccataaca aatggttatt cattaatcct gccataaact
    11161 cgcgttatta tgcattaatg cagcgaaaag ctctgttgtt aaagggttgc gcaacatacc
    11221 gcgcaaatga tactgatcat aagcgttaaa aaaatctaca aaccaacgca acacaattca
    11281 tgccctggca gtatgtcacg ttctcgcgtt tctgaacggg gaacggcgct ccattgagga
    11341 agttattctg atgaaaagta taaaattcag cctggcctgg cagattctgt ttgctatggt
    11401 gctgggcatt ctcctgggaa gctacctgca ctaccatagc gacagccgcg actggctggt
    11461 cgtcaatttg ctctctccgg cgggtgatat cttcatccat ctgatcaaaa tgattgttgt
    11521 gccgattgtg atctccacgc tggtggtggg tatcgcgggt gttggtgatg ccaaacagct
    11581 cgggcgtatt ggcgcaaaaa ccattattta cttcgaggtg atcaccaccg tcgccatcat
    11641 tttggggatc actctggcga acgtcttcca gcccggtgcc ggggtggata tgtcgcagct
    11701 ggcgaccgtc gatatctcga aatatcagag cactacggaa gcggtacaaa gcagttccca
    11761 cggcattatg ggcacgattt tgtcgctggt gccgacgaac attgtggcgt cgatggcgaa
    11821 aggcgaaatg ctgccgatca tcttcttctc ggtgctgttt ggtctggggc tttcctccct
    11881 gcccgcgacg catcgtgaac cgctggtgac cgtgttccgc tccatctctg aaaccatgtt
    11941 taaagtgact cacatggtga tgcgttatgc accggtgggt gtgtttgcgc tgattgcggt
    12001 gacggtggct aactttggtt tctcttctct gtggccactg gcgaaactgg tgctgctggt
    12061 gcatttcgcc attctgttct tcgcgctggt agtgctggga attgtggcgc gcctgtgcgg
    12121 gttaagcgtc tggatcctga ttcgtattct gaaagatgag ctgattctgg cgtactccac
    12181 tgccagctct gaaagcgtac tgccgcgaat tattgagaag atggaagcct acggagcacc
    12241 ggcgtcgatc accagcttcg tggtgccgac cggttactct tttaaccttg atggttcgac
    12301 gctgtatcaa agtattgccg ctattttcat cgctcagctg tatggcattg acctgtccat
    12361 ctggcaggaa atcattctgg tgctgacgct gatggtgacc tcgaaaggga ttgctggcgt
    12421 gccgggcgtg tcgtttgtgg tgctgctggc aacgctgggt agcgtaggta ttccgctgga
    12481 aggcctggcg tttattgctg gtgttgaccg tatcctcgac atggcgcgta ctgcgctgaa
    12541 cgtggtgggt aatgcgctgg cggtgctggt gattgccaag tgggaacaca aatttgaccg
    12601 caaaaaggcg ctggcttatg agcgtgaagt gctgggcaaa tttgataaaa ctgcggatca
    12661 ataattgaag attgccgggg ttatccaccc ggcaatgtgt ggatgcctga tgcgacgctg
    12721 gtgcgtctta tcaggcctac cttaaccgtt ggttaatttt tcaaactctt cacacccggt
    12781 atcaaaccct tccatacagc tcaggttcaa ccagtgcagc gccttttgtt tgttcttctc
    12841 gataaaacct tcctcaccgt ttaagaacat cattcccgcc cagtactcgg aataaccggt
    12901 tcgggaaatt gcagagctgc gtttgaaata ccaggttgcc ttgtcatcgt cggccttaat
    12961 gcccacgccg ttggcgtaaa tcaaaccaag cagcatttgg gcatcgacgg cggagtcatt
    13021 ctccagatct tccgaggcgt tttctaacag cgaaatcgcc tttggataat ccggtttacc
    13081 cgcttgagta tttaccagaa tatgcgccag cgttacttca ccttctttac tgcccgcttg
    13141 cgccgctttc tctgcaagaa cttttgcttg tggatagtcc agactgaccg gattggtgat
    13201 tttgatctgc gccagcagcg cgcaggcatc agcatcaccg ctgtcggcgg ctttctgtgc
    13261 ccaatattcg gctttgctca aatcgccgga gctaaaccag ctgtcggcaa gaaaatattg
    13321 tgcgcgtcgg tccccggcct ctgctgcctt taaatactgg ctgccaggct cggagtcgtt
    13381 cgcgtgggca aagaatgtca aaaacaacat caatgcgata atttttttca ttttgataat
    13441 acgattgggt agggagtaac cagtataaag agttcgaatg gataaaaaaa cagcctccga
    13501 aaggaggctg tagaaaggac tgtattacgc cagtgccgct tcgcgcaggc gagttttcaa
    13561 cttgttgtac tcgtcaatca cgtactgctc ggcggcgcgc tgatcggcga tcggctcgac
    13621 gcgcacggcg cagtatttgt attccggcgt tttcgtaatc gggcttaagt tttcggtaac
    13681 cagctcgtta caggcaccaa tccaccactg gtaggtcatg taaatcgccc ctttgttcgg
    13741 acgatcgctg acctgcgcac gggtgataat tttgccttta cgcgagtgca cccaaaccaa
    13801 tgcctcatct tcaataccca gacgtttggc gtcttcggta ttgatttgtg cgtagccagg
    13861 ttcatcagcc agcgccgcca gtgccgcaca gttaccggtc atcgaacggc aagagtagtg
    13921 accaacttca cgcaccgttg acagtaccat cgggtactcg tcggtgagtt tgtcgattgg
    13981 cgctacccag tcgcaggtga agaactgtgc cagaccgttc ggggtatcaa acttctcttt
    14041 aaacagataa gaagtcccct gatcggcatc tgaagtatcg cggcaaggcc actgaatgaa
    14101 gcccagttcg cccattttct cgtaagtcgc accgtagaaa tccgggcaca gatgacgcaa
    14161 ctcatcccag atctcctggg tgttgttgta gtgcatcgga taacccatac gggtggcgat
    14221 ttcactgatg atttgccagt ccgttttcag atcccatttc ggttcaactg ctttgaagaa
    14281 acgctggaag ccacggtcag ccgcagtaaa cacgccttca tgctcgcccc acgacgttga
    14341 cggcaaaatg acatccgccg ccgacgcggt tttggtcata aagatgtcct gaacgataac
    14401 cagttccaga tcttcaaagg ctttacgtac tgccgacagc tccgcgtcag tttgcagcgg
    14461 atcttcgccc ataatgtacg cggcacgcac ttcgccatgc gctgcgcggt gcggcagctc
    14521 gctgatgcga taaccggtat gagcaggcag gctttccacg ccccaggctt tggcgaattt
    14581 ctcgcggtta gccggatctt tcacgtactg gtatcccgga tacgtatccg gcagcgcgcc
    14641 catatcgcag gcaccctgca cgttgttctg accacgaacc gggtttacac ccgcatgcgg
    14701 cttaccgagg ttaccggtca gcatcgcgag gctggtcaga gaacgcacgg tttccacgcc
    14761 ctggtagaac tgggttacac ccatgcccca caggatggcg gcgcttttcg cctgggcata
    14821 catccgtgcc gcctgacgaa tctcactggc gctgacgccg gtgatatctt caaccgactc
    14881 cggcgtgtag ccttcaacga ttttacgata ctcttcaaag ccttctgtac gggaagcgac
    14941 gaacgctttg tcgtacagat tttcttcaat aatgacatgg cccatcgcat tcaacagcgc
    15001 gatgttcgag ccgtttttca gtgcaatgtg catgtcagca atgcgcgcgg tttcaatttt
    15061 gcgcggatcg cagacgataa ttttcgcccc gttacgttta gcgttaatta cgtgattcgc
    15121 cacgattggg tgggaatccg ccgggttgta cccgaaaacg aacactaaat cggtattatc
    15181 aatttcgtta atagcattgc tcattgcgcc attaccgacc gattggtgca gacctgcaac
    15241 cgatgggccg tgtcagacac gagcgcagca gtcaacgtta ttggtaccaa taacggcgcg
    15301 cgcaaatttt tgcattacat agttggtttc gttacccgta ccacgcgagg agccggtcgt
    15361 ctggatggca tccggaccgt acttctcttt gatggcgctc aggcgctcgg caacgtaatt
    15421 cagtgcctca tcccaggaaa caggttcgag tttgccgcca cgctggcgac ggatcatggg
    15481 ggttttcagg cgcggggtca ggatctgggt atcgttaatg aaatcccagc cataataacc
    15541 cttcagacac agggtaccct ggttggtttt cccctgcgct gcctccgccc ggacgatttt
    15601 gccgttatcg acgaccaggt tgattttgca acctgatgcg caataggggc aaaccgtgac
    15661 gacttttttc atcggtctcg ctccagttaa tcaaatcacg catacgcgct ctcgactaca
    15721 gtatgcatct tttatgccac attttatttg gggtcattcc ctgatattac gggcactatt
    15781 tattcaaaac tctgacgaaa aacaggctgt cgtcagtttt gacgtgacga aacgaaatac
    15841 cgcgtgacag ccatcacgcg gcagacattt tattttttct cgacgacggg agccgcctga
    15901 tacccgccgc ccagcgattt catcaactga atgctttgga tcacccggcg gctgtccagc
    15961 atcagtaatg acatctcttc ggcaagtact ggcaaccggg cttcagtggc ctgtaagcgg
    16021 ctggttaagc cgcgctgata ggcggcctcg gcagcgcgct gggtgaagcg cgttgcttcc
    16081 acgcgttcag cctgcatttc tcgctcgtcg ttgagcgttt gcagacgcgt gccgttgacg
    16141 gcaacgtcac gcaccgcgtt cagtactgac tggttgtaac gttcaatcat catgttgctg
    16201 gcggcgcgcg tgccttcgag attggcattc aaccgtccac cgtcaaacag cggcaatttc
    16261 agacccggga tgaagttgaa ctggcgactg gtttttttga ataaggtatc caggtggatg
    16321 gcatcaaggc cgaaaaacgc tttgatatca aagctcgggt agaacagcgc ccgcgcggaa
    16381 tccacctgat ctaatgacgc ctgaacatac cagcgcatgg cttgcagatc cgggcgtctg
    16441 gcgagcaact cataagagag tgtcgccgga atgccggtct ggactcgtgg taatgccacc
    16501 ggtttgatct ccggcatatc gctggccccc gcgccaatca atgcacgcag agattctcgc
    16561 gtttcggtga tttgcccttt gacggcagca atttgtttat cgaccgccag aatctgtgcc
    16621 cgcgcgccgt ggaaaggcac ttgtgcttcc agaccgtgcg ccactttact ctggtgcgct
    16681 ttcaccgcgt aatcaatcac atcgcgagtt tgttctaaca gatcgagcat ctgatagctg
    16741 gcctgcatac tgtaataaag ctgcgctacg cccgtggtca gcgatagctc tactgctgcg
    16801 gtttctgcca gcgcggcatt atgcgcgcca atggcggcgg caaccgctga gcgatgcaca
    16861 ccccacaaat caagatccag tccggcaaac aaacctactg tggcttccgt atagtacggc
    16921 ccgtccatac ccagtgcggg cgcatccatc gcataagggc ttaaaaagcc gttcgccgag
    16981 acgcgttggc ggttgagcat ccctaacgct gcgacctgta attgtgaacc ggcatctaac
    17041 aaatcggcct gggactgcgc tttttcttcc cgcagtttcg cttcggcgag ggtgtgtgaa
    17101 ccacttagcg tccgttggat cagcgcatcc agctgcgggt cattgagttg tttccaccac
    17161 tgcgcctgcg gccagccgga gctggcaaga tgaatatcgt cggccagttt gatttgttcc
    17221 ggtttgagct gttgatgagg tgcagaatcc ttacgtacca gggcacagcc ggaaatcagc
    17281 gtcgtgctgc cgagaatgct gcacaacagc agacgtgaaa gttgacgatt gatcattgcg
    17341 tggctccttg tgcctgttcc gtggcgggcg ttaatgccgg ggctgtccag tctggcaagc
    17401 gggcgaaaag ctggcagacg tgttgctcct gttttaataa ggtgggcagg atggcctgcg
    17461 aggcgggtgt ctcttcaagc gttatttgag gagaacggct gagtgcggtt gccagaccgg
    17521 cagcgtattt ctccagggcg tcggcaaact gagctgctct gtccggctgt agtgcgttat
    17581 ccagcgcctg cgccgagttc caggtggcat cccaggcgtg aagaatatcg cggccctgac
    17641 gaataaccgt ttgcgaacgt tcaatcagta aggcgcgttc ttcgctgtcc agttgacgct
    17701 ccagcgccac gcgttggcac atctcttcac aggcattaaa cgccgcatgc agaccgatac
    17761 gaatttgcag ataagtgcgc agagccgtga cttcctgctg gcgtgggatc cgcattactt
    17821 tacttaacat acccagcgtg ccagccagtt tttgcggcag tgtgcgcgct tcactttcag
    17881 gccagacaaa ggtgtaaatc accgcggaca ccacggtacc aatgatgata cccatggcgc
    17941 gatcgcgaat ttccaccagg tcgtacaccg ggccaaaaac gttttcgagc gtggcgagcg
    18001 cgaaggtgac caccatctgt gtgccgatat aagaagagcg ttcagagctg gtggcaatcc
    18061 atgcgcccaa caggaaaatc ggggccagca caaacagcaa ttcgacaata ttgtccagcc
    18121 agggcatgac cagtagcgtg aataacagcg ccagaatcgc gccgcaaaag gccccgccaa
    18181 aacgcagcac catcttctgg tacgacgaac cgacatttgg gttagcgacg atcacgcatg
    18241 tcagcataca ggtgtgaatg ccttcccagt ccacgccgct gtaaaaggtg taacagatca
    18301 aacaggcgag cagcgttttt accgcgtagc gcatatagtc tggattggta aaagcatcgg
    18361 cggccattga tggcggtttg gctgcgggcg ttggcggcgt attcgggtcc atctgaccca
    18421 gttgtaacaa cgtctggcag atattctcca ggttacattc ccgtgccgcc atcgcttcac
    18481 tttcactgat ccgccagtcg ctttgccagc actgaccttc agcaacggca tgctgcagct
    18541 tgttgatttc tgaagctaat ttttgtcgga attcaataat tgcctgagaa tcagcaaaag
    18601 aggtgggatc gtagcgattc agcgtcgagt aaatgtaggt taccgttgcc acgcagcttt
    18661 gccaccatgc gctttgagtt cgccagttgg catcgtccgc gagacaaaag acattcagtt
    18721 tttgcagcgc cagcgcctct ctttcaatcc gcgtttcggg tagcggtgcg aggctgtccg
    18781 tcaggtggct aatggcatca tcaagccgat cattaagcgc ctgatgcatt tgcgaaatgg
    18841 cacgactggg aaaccacagc acgccgatta acgtcatcag caaggttgga tagaggccaa
    18901 caacgataca ccacagcgtt aagcgcacga ccacttccgg atagtcgagc atggcgggga
    18961 aggtttgccc gtaaatggcg acaatggcga ctgcgaaaaa gaccagtccc agccgatggg
    19021 tgcgcatcaa aaacatacag cccatcagga tcggcccggc gatgatcaat cggatcaacg
    19081 gttcgccgta tgaccatttg tagatcaaaa acaggctgcc gatctccagc atcgtggcga
    19141 ccacaaataa gatcgcgaca aatttggtgt aaaacgcgtt cgactgaata ccgtaaaaca
    19201 gcactgccag cgataacgcc acgaaaggga tctcaaaggt catcgagatc agaatcacca
    19261 gcaggcagcc tacccagagt tgcacggtct gcggcacgcg gcctggtcgc cgctcgctta
    19321 actcttcatg aaagaacgcc agcagcctga ccaccggtaa tggcagggag ttgagcgcgc
    19381 tcattattgc ggctcaagat tagcgactgc cgaagcgccg atgcggaaca tttccgggtc
    19441 aggtttatcg accatgattt tgaccggaaa acgctgggca acgcggaccc agttaataga
    19501 gcgagaaact ttcggcaggc cgcccagcac caggccgccg tcatccggta gcacgccgta
    19561 gccaatcgaa tccactttac cctcgaaggt tttgccgctg tcactcatca ggcgaatcgt
    19621 tgcgggtgta cctgagcgaa tatttttcag atcggtttcg cggaagttgg cgatcacgta
    19681 ccagtgacga gtgtcgatta gggtaaaaat agggcgcatg gcagaagcaa attgcccgac
    19741 ggaggttttg agggaaatga cccggccatc aaacggcgcg cgaacggtcg ccatttccag
    19801 atgaagtttg gtcagggcaa tatccgcttc gaccgccgca cgttgcgcca ccagcgcatc
    19861 gacgccgctg acggcgctgg cggctgactg cgcctgtaac aatacggcat taagatcggc
    19921 ttctgcggcg cgctgcgcag ttcttgcacg gtcaacgtct tccgctgaga caaaaccctc
    19981 tttcagtaat ggctcggtgc ggcgtaatgt atctgtggcc tgtttcgcgg cggcacgggc
    20041 tttttctacc gtggcattaa tcgagtcggc accaaactgt tgcgcatcaa cgctacgctg
    20101 ggtgagcata atttgcttat ccagcgccgc gagggaggct tcagctttcg ccagattggc
    20161 ttcgaacggg cgcgggtcaa tgcggaacag caaatcgccc tgtttgactg cctggttgtc
    20221 ggtgaccgcc agttctacaa tgcggccgct gacttccggc accacatcaa tggtatctgc
    20281 tgacgcgtaa gcgtcattag ttgatggcgc actgtctacg cgccagataa cgaaaacaag
    20341 ggcaaccagc gccaatgcaa ccactaacag agcagggaat ttactgcgag gagctttttt
    20401 cggcgtactt tccatgagcg cgtctcaaat agattagaaa aatgccagcc agaacagcat
    20461 ggcgtagaga gcaaaaaggg cggtataaat aattccgaca aatgccagat tgatatttgc
    20521 ccgctgaata actcgcctcg tgatgagcat caaaataagg ctggcaatgg cgcagaaaaa
    20581 ccagctggga taataagcac cgatcaccgg gattgccgga gataatgagc atcccgaaac
    20641 catgaagacg ggaattatcc aggctgtttt tttgagttgc atcgccatgc gagagagaac
    20701 tgttggcata ttaaatacat cctgtctgct gcgaacaata tctgtagtga atgtcaatat
    20761 ccattgaagg cgtcagtatg gctattttct cgatgaataa aaatagcttt attcagccac
    20821 cgcattca
//
LOCUS       DAPGWB010000076        20817 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.076, whole genome shotgun sequence.
ACCESSION   DAPGWB010000076 DAPGWB010000000
VERSION     DAPGWB010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20817
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.076"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            114..419
                     /locus_tag="RHX79_002679"
     CDS             114..419
                     /locus_tag="RHX79_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001389654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197832.1"
                     /translation="MLMLNISVAKYIVKEFTSKQLNDLNELSQKLTEELKELPVREVK
                     KGIRRSQEEVKSFILKLMEQNPSVSATHALREFRDSGNSFEEKRFRAEFKALREAKP"
     gene            493..1743
                     /locus_tag="RHX79_002680"
     CDS             493..1743
                     /locus_tag="RHX79_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000040320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-guanine transglycosylase"
                     /protein_id="HDV2197833.1"
                     /translation="MSKLKYFFPDSQDFIDPSFDFFRETRNEHRVRQRDDHYPHEVFS
                     HPYDGMLVSKAVVDGLGGGESKYTRAQRLRYFRNGMKHFFRLPENMETMGDCGAFTYV
                     NQDVPPYRVEEVIEFYETSRFNYGVSLDHIVFGYERPGEVFSGEVLTECRRRQDITLT
                     LAQEFLNKSQKSCFTPFGVAHGWNKNSYRQSVEALLAMGYKNITMGGMVPLKTTQILE
                     TLEEIKPLLKSDTRVHLLGIARPESFADFIKFGVTSIDSTTPLQQAFKDRKNNYHTPD
                     GPAYTAVRVPQFDANPSLSRKIKSGVIDQDIARHLEKDAMNALFEYDKGALPLEKTLE
                     AVLAYERLHSGEKEANKIRADYERTLGERPWKQCQCNICQAIGINVIIFRGAERNRRR
                     GFHNIQVLYNRLQHTLSLRSEELS"
     gene            1740..2867
                     /locus_tag="RHX79_002681"
     CDS             1740..2867
                     /locus_tag="RHX79_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016538301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DGQHR domain-containing protein"
                     /protein_id="HDV2197834.1"
                     /translation="MSEYRVPALRIRQGEERQLYSLAIEGKQISKIAAISRIRRGEEN
                     LVGYQRPEVRNHIREIQRYIESKNPMIPNPVIIAFDKRVRFEPLTDNGDMGHLVIPFS
                     EDKDFEKPGFIVDGQQRTAALRDAEIDSFMMPVSAFIANDAEEQREQFMLVNSTKPLP
                     KTLLYELAPHTHGRLPSDLQMRKFPSLLTQRLNFGEGPLAGRIKTATNPDGVIADNSM
                     IKMIDASLREGALYRFRDPSTGLGDEVKMVKLLNNFWSAVETVFTDDWDKKPRYSRLL
                     HGVGILALGSLMDEIDQVHQDYKGEPGWTEIPSYTRFVEELNRIKPLCAWSSGAWNFG
                     TDIDGQPIVRKWNELQNLSKDISLVTDYLVTSYIKAANANI"
     gene            complement(2891..5074)
                     /locus_tag="RHX79_002682"
     CDS             complement(2891..5074)
                     /locus_tag="RHX79_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000186146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197835.1"
                     /translation="MTNVPQWLRDFFGNGNLLKLDRLLDNVENAYPADLKAVLLPLYE
                     SATDAQWPLILPWCDAHRWVFFAAADTARTTQELSNVLNARLGSADVIADRKVTFVPA
                     QGATSLSETALLTHCPAGFIRIELLPTKLKDKPAKERVFAALKDVIVLFRDRPSIVRT
                     VKRPFGRILSDFILANSQKDEATSDALLQELKNNGTLSRRNLMLLELQQAGKLEKWDT
                     LLNHDSLADLVRGRIPTTLMRMLLKAYQQRYFTPDSHGYPQASPADLRPQCLALNPLF
                     TQIPFLSQDETDFAAWKTWATGVMLIGEVDLLNALPERLKTDWLNGLHTWASRPFNLV
                     SPSATTATTSVPDTLQQLAAYLQTSLTATQEEIIGYAQTLHTLDQQLIEEAMAVPLLK
                     TLIEEIRHLTNPQIVGWDICFSRLCQSEVDSNSLVQLVALESENWPADSFHEATLLQL
                     LSSQIPPDAFPLLRNVMPAFIEWLERHHFSLSSRTWLKWLDVLAMEQSVSQADIKLAT
                     MATERFLQGSVSQEAYQQFGAMLELIVERASSFRNLSVLGELIELFLDSPVQDQATLT
                     SLWLSVQSFVSGIWTRLDPTARTVMRNLAADVLGEGAESVFPVEQDSCSADAEDELPD
                     LSGARVAIYSLTEGAARRAKRMLETLFPGIGVEISQAHTATDKLINQAKQADYFIFSA
                     GSATHQAFYAVSAQRRDLIYPTGKGAGSMLNAFITHVQQVSTVVV"
     gene            complement(5067..5597)
                     /locus_tag="RHX79_002683"
     CDS             complement(5067..5597)
                     /locus_tag="RHX79_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000392522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLD-like domain protein"
                     /protein_id="HDV2197836.1"
                     /translation="MEEQRQIFLHGPLGQRHLREILSAQFSGLILYPELIWLISPWMS
                     DFDVIDNRGGQWSFLDPSWGARMISFQELLATAVNNGCPLRIVTRKDTHSVVFIERLL
                     MRLSPDHDMQYLYHENLHAKGLLTKHFFLKGSMNYTWSGANVNDEHLLFSTNNTVISD
                     ALIEFSGQYTFGDTHD"
     gene            complement(5609..10045)
                     /locus_tag="RHX79_002684"
     CDS             complement(5609..10045)
                     /locus_tag="RHX79_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019843016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDV2197837.1"
                     /translation="MSTADLSLLHQALDLLEEREAELLVWGDTDGAFTHADIISLFTR
                     HLPYEDAESLLAELQKAAMLFSVPTSKGGTRYRTRMAEAVCLFRHQRQWFRNQPLQQA
                     RTLVADYRFVRRPRNYPKRELPAQTVLSKWVDVPWMNEIKRQALSRLIGDFFIAGFQE
                     RSTERILRAWHFHSHHARVKEATGTIVCAGTGSGKTLAFYLPALTSLLNDIQRDNAQR
                     VRTLALYPRKELLKDQFMETWSKCRELDNQALVLTGRKIRIGSFFGDTPFNHQYAMKD
                     KDKDMPFDLLRCTTPKCSGQMHWKAEDIKAKKEILRCSHCNHSVDSDEVILTRVSLMK
                     NPPDILFTTTEMLNQHLGNNQTNHLFGVGIDVTPPPVVLLDEVHTYVGNTGAQTAYLL
                     RRWMQLARSHPHFVGLSATLSDAERFFADLVGAHKKHVALIEPKFHEMEDEGAEYLLA
                     LRGDPVSQTALLSTTIQTSMLARRILDTKRKKSCGTWGQKTFVFTDDLDINNRLYHQL
                     CDAEGWRSRGQNLYVAKPPLASQRLETPKNSHKLTLAGQNWRIALDIGHSLDENDRAI
                     VARTSSQDVGVDPRAEVVIATASLEVGFNDPSVGMVIQHKAPRNVASYLQRKGRAGRS
                     RTMRPWMVAVLSEFGRDRVVYQRYEELINPEIKGQLLPMGNIHIQKMQAAMATLDWLS
                     MKIPGSNIWSLLNKPQTKRESLDHLDRMLHLITAVIEQHAWQLELEKYLFYALRITDE
                     QLQRVLWSPPRSIMMELLPTLKRQLTTQWSRMGQPEADRSTGRSPLPAFIPSALFSEL
                     NLPELEIHLERKFEKREHLPFIQGLKEFAPGRISKRYAVYSDNEADWLIPNNFVPAMN
                     CVSDVDFEIEQAFGNTWQPECVIECEGQPPIRVIRPMQVLTRALRFDQNLTEKSNSQL
                     YWHTRFNPDDQAVPLPIPTGPWAEILRSITFFTHQNMTPLDVTRYATHATASLRNKTK
                     QQAHVNFRWVEHGEPVGVGVRQWVDGARLRFTLPPNLLQRLRHDPAIQRALRTLYFQH
                     RIKREPRFEYDTFTADWIYECYLAAVTRELVTQSSLADSIAELKTPDGRRRLADIADT
                     LFQADNIFENCEDGEDDVESQELQQNLRNLFKETDILDMIDRHSAILTQDLSDDVDFQ
                     DWLQELLTTTLAGAVKQTSHLLLPDVDERGLVVDTELNDEVLDVWLTESEPGGCGIIT
                     RMEDVFHQDPVSVLNLFMRSFAVSDYEQIDYNLFEMLSRLSSSSELQEALNAIRQASS
                     HLQRRQANAHLRALLKAQGFALSHSFMSVLHTRVLRPGSQASHDAQMLAYLNAWRELE
                     DKAGYEIALNIFAHTQATQELPDASVIKVFERFCKIQGMLWQRGNAIRRSVLSYYNPF
                     KSGNNLTERLLLSSLFQQTACSISISESDWLAQLHHAITQHGFAELHIPREARHRIVE
                     VISLVQVTPIEYFGLHLYPRESAVDYQDGNLVLRFELAEALL"
     gene            complement(10049..10897)
                     /locus_tag="RHX79_002685"
     CDS             complement(10049..10897)
                     /locus_tag="RHX79_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000209821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197838.1"
                     /translation="MTTLRQQLAEMQKELDLSFQAGKASQIIDKCNLVCSKTNTIADK
                     FVLLKQQYSAQQQLPRGIAVTWNDEQRSELIAAANSVKSLMLQWRRWLKKQSVDNSGE
                     EENLADQEESPQESLGETLTASEEPTAYDIIQNDSLTHCVNQLGALHKDLSKELKDAW
                     NTWLEELHHQVHVDDKTLNFQKNTNKFDDIASDYERRRLDFENLTQSQPVSDEKIHQI
                     KALAEKLYSLRGMMKTDWPDVVQAFFNRINGPQNLRPTLSALTPEVLEWLTVEEMLDE
                     FVITRK"
     gene            complement(10894..14100)
                     /locus_tag="RHX79_002686"
     CDS             complement(10894..14100)
                     /locus_tag="RHX79_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019843017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197839.1"
                     /translation="MSIMEYWPSRKNIVQCIRNEAEELEDHVLLAVHEPMLLTRRDVN
                     ENHTILRDEDLFQQLLHTERAIPLIGRSGMGKSHLVRWLDCRFNMYLAENNKNEQWEI
                     VRIPKNASLRQVLLRILKNLTGEFFDNARMRVNEVTEQYPAKDLADLLLTMMAHQLQD
                     MQKAVKEEGQTLLAQGKDIPADRLAYMEAIIEEVENGICDLITDPNFKQNLLNPGHCI
                     FKLASRMSSGLKEGEEDHDKYELLPEDLYFIFEPDDLSARARRYLNHSQLHESDQVEA
                     RARAARVLNEAMHTSLKSLFKRLFTFNGGSFQELFQDIRKEFLRLNRRLVILVEDMAA
                     ISAIEDVLIDSLIEEAAPGGVQVLCPVHSVIAVTDNYPGYKRRQETLITRAGYEWVIE
                     NVDKDNNEDRIVSFCGRYLNAARFGSKELKKRPEQGKSLWPPVWHSDEIPDALEDFGY
                     SANQKFPLFPYNRSAILALADKHCRDSSGELIFNPRTIINRILLDILRDCRIEAEKTQ
                     FPPANFAGIHAVPEIEDKISQLVVSRVGSSVTLAAIWGYGIDSFDELRVKLPSSVAST
                     FGLDELAAQLNGKGPTMKSVEPVTKNAHETTGKTGSTPAGKKIDNPEFEPKEEAKYTA
                     KSELPFIRAVRAWVNDNVILPQEVARDLRTALNACYEIHAQPELFGMSSRPPLKEGRF
                     TLIFLPKAASNPSSIITNFYSEQDLTDPSRRVDVYNAAVALLRIQHYADLKQGFNYPE
                     AQEDYTRYQNFIQWWVPQATESAINHFRARNLRDALKKHLQKALLLGLVTGKEEPAEI
                     VNTLCLTQKGVGRTEGKSTGRTLTTAPSEICFRGIEATLHPHASARVAEARAQALVGW
                     DDARKAWLEQVAITEQGSGLGSSRALDADVIYSALKTVLKQPLGAEIERAALSVKQEL
                     ASTLKNVQLFANIKDSDDFLRQLNDWQTFIETVRAEHYPTGSAQYKPSSWLLGEIEAL
                     RTNSEESLATLNALLSIEKQKDSAKLWLEICQLDGDYVSRISSILAQWQLVQPKIAFT
                     LQQMNAKGDIQQLTLALNKVNDRLKTLASDIIASGVDQ"
     gene            complement(14097..14972)
                     /locus_tag="RHX79_002687"
     CDS             complement(14097..14972)
                     /locus_tag="RHX79_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000022533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197840.1"
                     /translation="MSIINNANPGSGLILLPLIERVLQSAQEPLSQDTLLARYRPDNL
                     PANDNAWRKLKENLSFWCNLGLWPMLDGKMLPLEAGVRPLAHRLLICTIDACREKGVA
                     SGNDCEPLWRVLSCLLSLQQHSVGGREPLSPTIITNKVHKWLPGETINSNTEKLVREF
                     GRFLGFLELMPDGNYVTDPTRAIQYFLPEIFDDTHTLPAKIFMANMAEVMPMMDGGQY
                     RNSVHDVMQQEKDWIAPEGDNICTSTSVALQRLEISRRIILSIHSDDKDALSLHLPGG
                     KIRRVSQITLREDAE"
     gene            complement(14959..17439)
                     /locus_tag="RHX79_002688"
     CDS             complement(14959..17439)
                     /locus_tag="RHX79_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013367830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HDV2197841.1"
                     /translation="MEEEWSRLQQALTTYFSQGVTFKDGIENQFLNRLIQIITDASAG
                     HGDIFAGYADALRAAHASGISEPWLPLPPELTDAPAPEWGMTKLPAVQQIQLAEESDL
                     ALTRATYQRKIRRNLLRPETDPALRRLLPEEPWLTHYQGFGQQAAIRTLLTSDNNCTL
                     LVNLPTSCGKSLLTQLQALSAPTNTLTLVIVPTVALAIEQADDMQKLLRGADQDHGGS
                     YVWIGGQDQPSRQAIKERIKAGTQRVLFCSPESVRSSLVPLLFELSRLNMIGAIVIDE
                     AHLIDQWGAEFRPDFQLIAPMIRSLKAMGKCRFRTLLLSATYSKSTRDILVEQFHDEN
                     SELIEVSANFLRPEPEYFVHHEANENAHRQRVEQLLMTLPRPLILYCTTRTDAEMWSA
                     RLNELGYWRIGIFHGQIDTNNRKKLISKWKNDQLDIMVATSAFGVGMNKKEIRSIIHA
                     AIPENIDRYYQDCGRAGRDGRSCQVHLVWHKAQMKTAKSLAVETLIGVEKGFARWKAM
                     FDDRKKSPIADYMISLNTKPVHIDHQGDKNEAWNRRTLLLMQRAGLIKLVFAEPKIPD
                     DLRDNLDDNNTQLIEWFESYYNHVHIRHCDDAHYSEAHWNTYVEKIRQSELNNRRAAF
                     TVMETWLEDPGKPLCKILQKFYEYQSHPPELTCGGCPGCRQKGKRAFSPTVGTDVQIL
                     RSEPKKKALFVGAEKKVYYNENMKLHSLLMELRVTLRSLITSGEYVFIRADRAVFLQL
                     ENNLDSLSHFWSAQKMTAPASDGPEIVIIPNTANAFPDLPMTRFERIIIAPEHLADPQ
                     FPHRTWCASAANALSLDSFIRQLQHVNN"
     gene            complement(17439..20546)
                     /locus_tag="RHX79_002689"
     CDS             complement(17439..20546)
                     /locus_tag="RHX79_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019843018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase SNF2"
                     /protein_id="HDV2197842.1"
                     /translation="MNVLPIGSLVISEQFEGIGKVVTVDSDTNNATVAFFESPAQPYA
                     RQMKVPLEQLTLTIPHEETVIYCIEPHSQRWTRARFGGSRPKGDFLVIFREDETTTLP
                     IDEIFVLNKAPDTPINPADFLALQANDAPFFFPYRQAFIETYIQQRAACRAMASISSS
                     AVELEPHQLAVVRRVLQDKNPKYILADEVGLGKTIEAGMVIREHALEATGHVSMLIAV
                     PAPLVSQWREELAERFQLKQLIIDASTALAGLRQNEATEGIVICSHCDGCTLIERGFT
                     PSLIAVDEVHQIASWPWSGDKDERYDFNLIAEGCRKAHYVLLLTGTPLHGHERNFLSM
                     LHCINPEAYQVDETHLQDFTELVKNRENLGGIFSGLVPSVSNVSLRRNLETLQQQFPE
                     DTVLMTLCQQLIPLIGTFSPNTPEREEGIRDIRRHLGENYRIHHRLLRNRRQVSLSFD
                     ETKNLNLNLLFPGLNGAEECRWYCDGLALDELIDEYRSLSLLPQNTQWAMSEDTYLFW
                     VDDLLSSPLCVMQRAKVHLGEAERTQEERDLLEHIVSTAKNELQAIDYKLAITLNEWL
                     QKNPTGKAIVFCDRPDLAQHLAIKLELLLEYPQELYQPGHPLMYLKPGSPIRILICDK
                     SGEDGLNLHGGLRLAVHYGLPRSCSRIEQRLGRLNRYSANLKGVKPVQSLILKNHADC
                     GLRNVWARILKDYIGVFNNTIASLQFVLDDYLENAWQNVYQEGPVALERVAREFPGEQ
                     GILANETHKINMQEKLLAMDDEIAEAAIFAQQISADDHLAVAQCNALTSWITRVLRFR
                     TTGTAEKGIKFQFELSDRSTGTLVDFKTFLTTCMLSFDKEGGNPPSTHLMSAERIPAI
                     DGTTVYPLRYGQPFVDTIWQLLNQDARGSSMAVLRVLPKPLNEPNYFFQSTWLVTHCQ
                     KQDTYAQRRIADELYPPRIVQHWLSSNGTPVINPQLLELLNGEYAKHETSQKFYADIN
                     LRPNLWQEIEELVSPDTWKEMVERVYTSDREQQQATFGEQARLQLMAVKAVVVCSRNL
                     LEEIV"
BASE COUNT         4973 a         5127 c         5246 g         5471 t
ORIGIN      
        1 tggctgacgc aaaaaaacaa ctgctcatta taacttccca aaaggtcaat cgtaggctaa
       61 cggcatacct tttcaaaaca aacaaaaata tggctcagtg gttgagatgc aatatgctta
      121 tgcttaatat cagtgtagca aaatacattg tgaaggaatt tacgtcaaaa caactcaatg
      181 atttaaatga gttatctcaa aagttaacag aagaactcaa agagttacct gtgcgcgaag
      241 tgaaaaaagg aattcgtcgt agccaagagg aagttaagtc attcatttta aagcttatgg
      301 aacaaaatcc tagtgtcagt gcaacacatg cgttgcgtga atttcgtgac tcgggaaatt
      361 catttgagga aaaacgtttt cgggctgagt ttaaggccct tagagaggct aaaccttaat
      421 gctacttgct gggatttcat ggtagaatcc ctcgtttttt gagacgttgc agtggtgtca
      481 caggagagta agttgtcgaa gctaaagtat tttttcccag atagtcagga ttttattgat
      541 cccagtttcg acttcttccg cgaaacgcgt aacgaacatc gcgtgcgtca acgtgacgat
      601 cattatccgc atgaggtttt ttctcatcct tacgatggta tgctggtttc taaagccgta
      661 gtagatggtc ttggtggcgg tgagagcaaa tatacccgtg cccagcgttt acgttatttc
      721 cgtaatggaa tgaagcactt tttccgtctt ccagaaaata tggaaactat gggtgattgc
      781 ggagccttca cctatgttaa ccaggacgtc cccccatacc gtgtggaaga ggtgattgag
      841 ttctacgaaa cttcccgctt taactatggc gtttctctcg atcacatcgt ctttggttat
      901 gagaggccag gggaagtatt cagtggcgaa gtattgactg aatgtcgccg acgccaggat
      961 atcactctga ccctggcaca agagttttta aacaagtctc aaaagtcctg tttcactccc
     1021 tttggtgttg cacatggatg gaataaaaac tcctaccgtc agtctgtaga ggccctgcta
     1081 gccatgggat acaaaaatat caccatgggg gggatggtac cgttgaaaac gacgcagatc
     1141 cttgagaccc tcgaagaaat taaaccgctg ctgaaaagtg atacacgtgt tcacttgctt
     1201 ggtattgccc gtccagagag tttcgccgac tttatcaagt ttggtgtgac cagtattgac
     1261 tcgacaacac cgctgcagca ggccttcaaa gatcgaaaaa ataactacca tacgcctgat
     1321 ggcccggcct ataccgctgt gcgagttcct cagtttgatg cgaatccaag tttgagtcgc
     1381 aaaataaaat ccggcgtgat tgatcaggat attgctcggc atctggaaaa ggatgccatg
     1441 aatgccctgt tcgaatacga taaaggggct ttgccccttg aaaaaactct tgaggcagta
     1501 ctggcttatg aacgcctgca ttcaggtgaa aaagaggcca ataaaatccg tgcggattat
     1561 gaacgcacac tgggtgaacg tccctggaaa caatgccagt gcaatatttg ccaagctatc
     1621 ggtatcaacg tcatcatttt ccgcggagca gaacgtaacc gtcgccgcgg tttccataat
     1681 attcaggtgt tgtacaaccg tttacagcac acattgtcat tacgctcaga ggaactgtca
     1741 tgagtgaata tcgtgttccc gccctgcgaa tccgacaggg tgaggagagg caactctata
     1801 gccttgcgat agaaggtaaa cagattagca aaattgcagc gatttcgcgt attcgtcgcg
     1861 gtgaagagaa tttggttggt tatcagcgtc cagaagtacg taaccatatt cgcgaaattc
     1921 agcgctatat tgagagtaaa aacccgatga tacccaaccc ggtgattatc gcttttgata
     1981 agcgtgtgcg ttttgaaccg cttacagata atggcgacat ggggcatctg gtgatacctt
     2041 tctccgaaga taaggatttt gagaagcctg ggtttattgt ggatggtcaa caacgtaccg
     2101 ctgctttgcg ggatgcggaa atcgactcgt ttatgatgcc ggtctctgca tttatcgcta
     2161 atgatgcaga agagcaacgc gagcagttta tgctggttaa ctccacaaaa cctctgccca
     2221 aaacgttgtt atacgaattg gcaccacata cccatggtcg tttgccatcc gatctgcaaa
     2281 tgcgtaagtt tccttcactg ctgactcaac gactaaactt cggcgaagga ccacttgcag
     2341 gacgtatcaa aacggcaacc aatcctgatg gggttattgc tgacaactcg atgattaaaa
     2401 tgatcgatgc cagtcttcgt gagggagcat tgtatcgatt ccgtgacccg tcgacaggtt
     2461 tgggggatga agtgaagatg gtgaaactgc tgaataactt ctggtcggcg gtggaaaccg
     2521 tgtttactga tgattgggac aaaaagccac gctattcccg cctattacac ggcgttggta
     2581 ttcttgctct tggtagtttg atggatgaaa tcgatcaggt tcatcaggac tataaaggtg
     2641 aacctggctg gactgagatt ccttcctata ctcgttttgt cgaagagtta aaccgcatca
     2701 agccactttg tgcatggagt agtggcgcgt ggaacttcgg tacggatatt gatggtcagc
     2761 ccattgttcg taaatggaat gaactgcaga acctgtcgaa agatatctca ttagtgacgg
     2821 attatctggt caccagttat atcaaagcag cgaacgccaa tatataaaaa gggggcattt
     2881 gcccctattt ttataccact actgttgaga cttgctgaac gtgcgtaata aacgcgttca
     2941 gcattgaccc ggcaccttta cctgttgggt agattaaatc tctgcgctgc gctgagaccg
     3001 cgtaaaaagc ctgatgagtg gcgctgcctg ccgaaaagat gaagtaatca gcctgttttg
     3061 cttgattaat caacttatcg gttgcagtgt gtgcttggct gatctccact ccgatcccgg
     3121 gaaacagcgt ttccagcatc cgtttcgcgc gtcttgcagc accttctgtc aagctataaa
     3181 tcgccactct ggctccggat aagtccggca attcatcttc tgcatctgcc gaacagctat
     3241 cctgctcaac cggaaataca ctctctgcac cttcccctag cacgtcagcc gccaagttgc
     3301 gcatcacggt acgagcagtc ggatccagtc gcgtccatat tccgctcaca aaagactgaa
     3361 cgctgagcca cagcgaggtg agcgtcgcct gatcctgcac cggagaatca aggaagagtt
     3421 cgatcaactc gcccagcact gacaggttac ggaacgaact ggcgcgttcg acgatcagtt
     3481 ccaacatggc tccgaactgt tgatatgctt cctggctaac agagccttgt aggaagcgct
     3541 ccgtcgccat cgtggccagc ttgatatccg cctgactgac gctttgttcc atcgcaagaa
     3601 catccagcca ctttagccac gtcctgctac tcagactgaa atgatgacgc tcaagccatt
     3661 caataaaggc aggcatcacg ttacgaagga gcgggaacgc gtctggtgga atctgacttg
     3721 atagtaactg gagcagcgtc gcttcatgga acgagtcagc gggccagttt tcactttcca
     3781 gcgcaaccag ttgcacaagg ctgttgctgt cgacttctga ctgacatagt cgggaaaaac
     3841 aaatatccca gcccacgatt tgcggattgg tcagatggcg gatctcctcg atgagtgttt
     3901 tcagtagcgg taccgccatc gcttcctcta tcaactgctg gtcaagcgtg tggagcgttt
     3961 gtgcgtagcc gataatctcc tcttgcgttg cggtcaggga ggtttgtaaa tatgccgcaa
     4021 gctgttgcag cgtatccggg accgacgtcg tcgctgtcgt cgctgacgga ctcactaagt
     4081 tgaacggccg actagcccag gtgtgcaatc cattcaacca gtcggttttt aggcgttctg
     4141 gcaacgcgtt gagcaggtcg acttcaccaa taagcatcac tccagtggcc caagttttcc
     4201 acgccgcaaa gtcagtttca tcttgggata aaaaaggtat ctgcgtaaac agagggttta
     4261 gtgccagaca ttgcgggcga agatccgccg gtgaggcttg cggataccca tggctgtcgg
     4321 gtgtaaaata gcgctgctgg tatgctttca gcagcatccg catcagggtt gtaggaatgc
     4381 gtccccgaac caaatcagca agagaatcgt gattcagcag tgtgtcccac ttctctaact
     4441 tacccgcctg ctggagttcg agcagcataa ggttacgtcg cgaaagcgta ccgttgttct
     4501 tcagttcctg tagtaaagcg tcgcttgtgg cttcgtcttt ttggctattc gccagaatga
     4561 aatcactcaa gattcgcccg aaggggcgtt tgaccgtgcg tacgattgat ggcctgtcac
     4621 gaaataggac gataacgtct tttagcgcgg cgaaaacccg ctcttttgct ggtttatctt
     4681 taagctttgt gggcaataat tcgatccgga taaatccggc tggacagtgc gtcagcaacg
     4741 ccgtttcaga cagggacgtc gctccctgtg cggggacaaa ggtcaccttt ctgtcagcaa
     4801 taacatctgc agaccccagc ctggcattca acacattgct gagttcctgc gtggtgcgag
     4861 ctgtatctgc cgcggcaaaa aatacccagc gatgggcatc acaccagggc agaatgagtg
     4921 gccactgagc atcagtcgcg ctctcgtaaa gcggcagtaa tacggctttt aagtctgcag
     4981 ggtaggcgtt ttcaacgttg tccagcaacc tgtccagctt cagtaaattt ccgttgccaa
     5041 agaagtcacg cagccattga ggaacattag tcatgggtgt ctccaaaggt gtactggccg
     5101 ctaaattcaa tcaacgcatc tgaaatcacc gtattattgg ttgaaaacaa cagatgctca
     5161 tcgttcacgt ttgcgccgct ccaggtgtaa ttcatggagc ctttcagaaa gaaatgtttg
     5221 gtcagcaatc ccttagcgtg caggttctcg tgatataggt attgcatgtc gtgatcgggc
     5281 gataagcgca tcaatagtcg ctcgataaaa accacgctgt gcgtgtcttt acgtgtcacg
     5341 atacgtaacg ggcaaccatt gttaacggcg gtggcgagca attcctgaaa gctgatcatc
     5401 cgagctcccc atgaaggatc aagaaaactc cactgaccgc ctcggttatc aatcacgtca
     5461 aagtcactca tccacggaga gatcagccag atcagttccg gatagaggat caagccacta
     5521 aactgcgcgc ttaggatttc ccgcaaatgt cgctggccca gtgggccatg caggaaaatt
     5581 tgtcgttgtt cttccatttc tgcgttcctt acagtagcgc ttcggccagt tcaaaacgta
     5641 acaccagatt gccatcctga taatccacgg cggattcgcg gggataaaga tgcaaaccaa
     5701 agtactcaat tggagtcacc tgcaccagag agatcacttc cacaatacga tggcgagcct
     5761 cgcgcgggat atgcagttct gcaaagccgt gttgggtaat ggcgtgatgt aactgcgcta
     5821 accaatcgct ctcgctgatg ctgatgctac acgccgtctg ttgaaacagt gagcttagca
     5881 gcagtcgttc agtcaggttg ttaccggact taaacggatt gtaatagctg agaaccgacc
     5941 gacggatggc attgccgcgc tgccagagca ttccctgaat tttgcaaaag cgctcaaaaa
     6001 ctttaatcac actggcgtca ggcagttctt gcgtcgcttg ggtatgggca aaaatattca
     6061 gagcgatttc gtatccggct ttatcttcca attcccgcca tgcgttgaga tatgcaagca
     6121 tctgcgcatc atgtgacgct tggctgcccg gacgtaatac ccgcgtgtgc agcaccgaca
     6181 taaaactgtg actaagtgca aatccctgcg cctttagcag cgctctgagg tgggcgttag
     6241 cctggcgacg ctgcagatga ctgctggcct gacgtatcgc attcaaggcc tcctgaagtt
     6301 cgctggaaga tgagagccgc gaaagcatct cgaacaggtt gtagtcgatc tgctcgtaat
     6361 cgctgacggc aaaactacgc ataaacagat tcagtacgga gaccggatcc tgatgaaaaa
     6421 cgtcttccat acgggtaatg ataccacagc cgccgggttc tgattcggtc agccagacgt
     6481 ccagtacttc gtcgtttagt tcggtatcca ccaccagacc gcgttcatcg acatccggca
     6541 gcaacaggtg gctggtttgt ttgaccgctc cggccagcgt cgttgtcagt aactcctgta
     6601 gccagtcctg aaaatcgaca tcatcactga gatcctgagt caggatcgcg ctgtgcctat
     6661 ctatcatgtc cagaatgtcg gtctctttaa acaggttgcg caaattttgc tgcagttcct
     6721 gactttcaac gtcgtcttca ccatcctcgc aattttcaaa gatattatct gcctggaaga
     6781 gtgtgtccgc gatatcagcg aggcgacgtc ggccgtccgg agtttttaat tccgcgatag
     6841 aatctgccag agacgactgt gtgaccagtt cccgcgtaac cgcagccaga tagcactcgt
     6901 agatccagtc agcggtaaac gtgtcatatt cgaagcgtgg ttcacgtttg atgcgatgct
     6961 ggaaatagag tgttcgcagt gcgcgctgaa tggccgggtc atgccggagg cgttgcagca
     7021 gattgggtgg cagcgtaaat ctgagccgtg cgccatccac ccactgccgc acgccaaccc
     7081 cgacaggctc gccatgctcg acccatctga agttcacatg cgcctgttgc ttggttttat
     7141 tgcgtaatga ggctgttgcg tgggtggcgt aacgcgtgac atctagaggt gtcatgttct
     7201 ggtgggtgaa gaacgtaatg gagcggagga tctccgccca cgggccggta ggaatgggga
     7261 gcggaacggc ctgatcgtct gggttaaaac gggtatgcca gtacagttgc gagttgcttt
     7321 tctcggtgag attttgatca aatctcagcg cgcgcgtaag cacctgcatc gggcgaatga
     7381 ccctaatagg gggctgacct tcgcactcga tgacacactc gggctgccaa gtattgccga
     7441 aagcctgctc aatttcaaaa tcaacatccg aaacgcaatt catcgccgga acaaagttgt
     7501 ttgggataag ccagtctgct tcattgtcgg agtaaacggc atagcgcttg gaaatgcgcc
     7561 ccggcgcaaa ctctttcagc ccctgaataa agggcaaatg ttcacgcttc tcgaacttcc
     7621 gctcgagatg gatctccagt tccggcagat taagctcact gaatagcgct gaaggaataa
     7681 aggccggcag tggggaacgt cccgtcgaac gatctgcctc cggttggccc atccgcgacc
     7741 attgggtcgt gagttgtcgt tttaatgtcg gcagcaactc catcatgatc gaacggggcg
     7801 gcgaccacag tacacgctga agttgctcgt cagtgatgcg caacgcgtaa aacagatact
     7861 tctccagctc cagctgccac gcatgttgtt caatcacggc agtaatcagg tggagcatac
     7921 gatcaagatg atcaagagat tctcgctttg tctgcggttt attcagcaat gaccagatat
     7981 tacttccggg gatcttcatg ctcagccagt caagtgtcgc cattgccgcc tgcattttct
     8041 ggatatggat gttgcccatt ggcaacaact gtccttttat ctctggatta atgagctctt
     8101 catagcgttg ataaacgact cggtcgcggc caaattcgga taggacagcg accatccacg
     8161 gacgcatggt tcttgaacga ccagcacgcc ctttgcgctg caaataggag gcaacgttac
     8221 gtggcgcttt atgctgaata accatgccaa cggaggggtc gttaaagccc acctccagcg
     8281 acgcggttgc aatcaccact tccgctctag gatcgacccc gacgtcctga ctggacgtgc
     8341 gggcaacgat ggctcggtca ttttcgtcaa gtgagtgacc aatatccagc gcgatacgcc
     8401 agttctgtcc tgccagtgtc agcttatggc tgtttttcgg tgtttccaga cgctgagaag
     8461 ccagcggtgg ttttgcaacg tataagtttt gaccacgcga ccgccagcct tcggcgtcac
     8521 acagttgatg ataaagtcgg ttattgatat ccagatcgtc ggtgaagaca aaggtttttt
     8581 gcccccatgt cccgcatgat tttttccttt tcgtatccag aatacgccga gcgagcatgc
     8641 tggtctggat agtagtagat agcaaggcgg tttgcgagac cggatcaccg cgtaatgcca
     8701 gcagatattc agccccttca tcttccattt cgtggaactt cggttcgatc agagccacat
     8761 gttttttatg tgcacctacc agatcggcga agaaacgttc ggcgtcactc agcgttgccg
     8821 aaagcccaac aaaatgaggg tggctgcgcg caagttgcat ccagcgtcgc agtagatagg
     8881 ccgtctgtgc accggtattc cccacatagg tgtgtacttc atccagcagg actaccggcg
     8941 gaggtgttac gtcaatgcca acgccaaata ggtgattcgt ttggttattc cctaggtgct
     9001 gattgagcat ttcggtagtg gtaaacagga tgtcaggcgg gtttttcatc agcgagacgc
     9061 gggtcaggat tacttcgtca ctgtctacgc tgtgattaca gtggctacaa cgaagaatct
     9121 cttttttcgc tttgatatct tctgctttcc agtgcatttg ccccgaacat ttcggcgtgg
     9181 tacaacggag taaatcaaag ggcatatcct tgtctttatc tttcattgcg tattgatggt
     9241 tgaacggggt atcaccgaaa aaagaaccaa tacggatctt gcgtcctgtc agtactaggg
     9301 cctgattatc aagttcacga catttactcc aggtttccat gaactgatct ttaagcagtt
     9361 ctttacgtgg atacagtgcc agcgtcctga cccgttgcgc attgtcgcgc tgaatatcat
     9421 tgaggagcga ggtgagtgcc gggagataga acgccagtgt tttaccactc cccgtaccgg
     9481 cacagacaat ggtcccggta gcttctttca cgcgggcatg atgactatga aagtgccagg
     9541 cgcgcaaaat acgttcggtt gagcgttcct gaaagccggc aatgaaaaag tcgccgatca
     9601 gtcgggaaag cgcctggcgt ttaatttcgt tcatccacgg aacatcgacc catttgctca
     9661 gcaccgtttg cgccggaagt tcacgcttcg gatagttgcg cgggcgacgg acgaaacggt
     9721 agtcggcgac aagcgtccgg gcttgctgaa gcggttgatt gcggaaccat tgacgctggt
     9781 ggcggaacag gcataccgct tctgccatac gcgtgcggta gcgagttccc cctttgctgg
     9841 tcgggacgct gaaaagcatg gctgccttct gcagttctgc cagtaacgac tcggcatctt
     9901 cgtacggaag gtgccgggta aagagcgaga tgatatcggc atgggtaaat gcgccatctg
     9961 tatcccccca gaccagcagt tctgcttccc gctcttcgag cagatccagc gcttggtgca
    10021 ggagggacaa atcagccgta gacataaatt atttccttgt gatcacgaac tcatccagca
    10081 tctcttcaac cgttaaccac tcaagcacct caggcgtaag ggcgcttaac gtcgggcgca
    10141 agttctgcgg gccattaatg cgattgaaaa atgcctgaac cacgtcaggc cagtccgttt
    10201 tcatcatgcc gcgcagggaa tacagtttct cggctagcgc tttaatttgg tgaatctttt
    10261 catcgctgac tggctggctc tgcgttaagt tttcgaaatc cagacgtcga cgctcgtagt
    10321 cggaggcgat atcatcaaat ttattcgtat ttttctgaaa attcagagtt ttgtcatcga
    10381 cgtgaacttg atgatgtaac tcttccagcc atgtattcca agcatctttt agttctttgc
    10441 ttaggtcctt gtgcagggcg ccgagttggt tgacgcaatg ggtcaaggaa tcattctgga
    10501 tgatgtcgta ggcagtaggt tcctctgagg cggtcagagt ctcacccaga gattcctgtg
    10561 gtgactcttc ctgatctgca aggttctcct cctcgccaga attgtctacc gactgttttt
    10621 tcagccagcg tctccactgc aacatgagac ttttgacgct gttcgcggca gcgatcagtt
    10681 cgctacgctg ctcgtcattc caggtaaccg caatgccccg cgggagttgt tgctgggctg
    10741 aatattgctg tttaagcaat acaaacttat ctgcaatggt gttagttttg ctgcacacca
    10801 gattacattt atcgatgatt tgtgaggcct taccagcctg aaagctaaga tcgagttctt
    10861 tttgcatctc ggccagttgt tggcgtaagg tggtcattga tcaactccag aggcgatgat
    10921 atcgctcgca agtgttttta gacggtcatt cactttattc agagcaagag tcagttgctg
    10981 gatatcccct ttggcattca tctgctggag tgtgaacgcg atcttgggtt gtaccagttg
    11041 ccattgcgca agtatgctgc tgattcttga aacgtagtca ccatcaagtt gacagatctc
    11101 cagccacaat ttcgcactat ctttctgttt ttcaatggaa agtaacgcat ttaatgtcgc
    11161 cagactctcc tcggagttgg ttctgagagc ttcaatttcc cccagcagcc acgaagatgg
    11221 cttgtactga gcgctgccag tggggtagtg ctcggcccgc acagtctcaa taaacgtctg
    11281 ccagtcgttc agttgtctga ggaaatcgtc actatctttg atgttggcaa agagctgaac
    11341 attttttaac gtgctggcaa gttcctgttt gacggagagc gccgcacgtt caatttctgc
    11401 gccaagcggc tgttttaaca ctgttttcag cgcagaatat attacatcgg catccagcgc
    11461 acgactgctg cccaagcctg agccttgctc cgtgatggca acctgttcaa gccacgcttt
    11521 tctggcatca tcccatccta cgagcgcctg cgccctagct tcggcgactc tggcactggc
    11581 gtgcggatgc agtgttgcct caatccctct gaaacagatc tcggaaggag cggtcgtcag
    11641 cgttcgaccg gtacttttac cttcagttct tccgacgcct ttctgggtga ggcagagggt
    11701 attgacgatt tccgccggtt cttctttacc ggtcaccagg ccaagcagca gagctttttg
    11761 cagatgcttt ttcagcgcat cccgtaagtt acgcgcccgg aagtgattaa tggcactttc
    11821 cgtagcctgc ggtacccacc actggatgaa gttttgatag cgagtatagt cttcctgcgc
    11881 ctctggataa ttaaaacctt gctttaaatc ggcgtaatgc tggatacgta acagggctac
    11941 cgcggcgtta tacacatcta cccgtcggga aggatcggtc aggtcctgct cagagtaaaa
    12001 gttcgtaata atacttgagg ggttagatgc cgcttttggc agaaaaatca acgtaaaacg
    12061 accttctttc agcggtggtc gagaagacat accaaacaac tctggctgtg catgaatttc
    12121 ataacaagcg ttcagtgccg tacgcaaatc acgggcaacc tcctgcggca gaatgacatt
    12181 atcattcacc catgcacgga cagccctgat aaagggtagt tcggatttgg cagtgtattt
    12241 tgcctcttct ttcggttcga actccggatt gtcaatcttt ttacccgccg gcgtactgcc
    12301 tgtcttgcca gtcgtttcgt gtgcgttctt tgttactggt tccaccgatt tcatcgtggg
    12361 acctttgcca ttcagttgtg cggctagctc atcgaggcca aaggtactcg caacgctact
    12421 tggcagtttt acgcgtagtt catcaaaaga atcaatgcca tatccccaga tggcggcaag
    12481 tgtcaccgaa ctgccaaccc gactgacaac cagttgtgaa atcttgtctt cgatctcggg
    12541 aacggcatga attccagcga aatttgctgg cgggaactgt gttttttccg cttctattcg
    12601 gcaatcgcgt agaatatcta acaggatgcg gttaatgatt gtgcgcgggt taaaaatcaa
    12661 ctcgccgctg ctgtcgcggc aatgcttatc cgccaatgcc agaatggcac tacggttata
    12721 cgggaatagc gggaatttct gattggcaga ataaccaaaa tcctctagtg catcagggat
    12781 ctcatcactg tgccatacag gtggccacag agacttacct tgctcaggac gtttttttaa
    12841 ctcctttgat ccaaagcgtg cggcgttcag atagcgacca cagaacgaga caatacgatc
    12901 ttcgttattg tctttatcga cgttctcaat gacccactcg tagccagcac gtgtgattaa
    12961 cgtttcctgg cggcgtttat agccaggata attgtcggtg actgcaatca ctgagtggac
    13021 aggacagaga acttgcacgc cgccaggtgc cgcttcttcg atcagactgt cgatcagaac
    13081 atcttcaata gcggaaatcg ccgccatatc ttctaccaga atcaccagac gacgattaag
    13141 tcgtagaaac tccttgcgga tgtcctgaaa aagctcctga aaagatcctc cattgaaggt
    13201 gaacaggcgc ttgaaaagtg atttcagcga ggtatgcatg gcttcattga gcacgcgcgc
    13261 tgctcgggca cgcgcctcca cttggtctga ctcatgcagt tgagaatggt tcagatagcg
    13321 gcgtgcacgc gcggacagat cgtcaggttc aaagataaaa tagagatctt ccggaagaag
    13381 ttcatattta tcatgatctt cttctccttc tttcagacca ctactcatcc gactggcaag
    13441 tttgaaaata cagtggcctg gattcagaag attctgtttg aagttagggt cggtgatcag
    13501 atcacagata ccgttttcga cctcttcaat gatagcttcc atataggcga gtcggtctgc
    13561 aggaatgtct ttaccttgcg ccagcaatgt ttgaccttct tccttgaccg ctttttgcat
    13621 gtcctgcaac tgatgggcca tcatggtcaa cagtaggtct gccagatctt tcgctgggta
    13681 ctgttctgtc acttcattaa cgcgcatgcg tgcgttgtcg aaaaattccc ccgtcaaatt
    13741 ttttaggatg cgtaaaagca cctgccgtag actggcgttt ttgggtatcc ggacaatttc
    13801 ccattgctca ttcttgttgt tttccgctag gtacatgttg aatcggcagt ctaaccagcg
    13861 caccagatgt gatttcccca tccccgagcg gccaatcagt gggatcgcgc gctccgtatg
    13921 aagtaactgc tggaacaggt cttcatcacg caatattgta tgattttcat tgacgtcgcg
    13981 tcgggtcagt agcatcggtt catgtacggc cagaagcaca tgatcctcta attcttctgc
    14041 ttcattgcga atgcattgga cgatattttt cctggatggc caatattcca ttatgctcat
    14101 tctgcatcct ctcttagcgt gatttggcta acccggcgaa ttttaccgcc aggtaagtga
    14161 agtgataagg cgtctttatc atcactgtgg atggagagga taatgcgtct actgatttca
    14221 agtcgttgca gcgcaacaga tgtgctggtg cagatattgt caccttccgg tgcgatccag
    14281 tctttttcct gctgcatcac gtcatgaacg gagtttctgt actggccccc gtccatcatc
    14341 ggcatgacct ccgccatgtt tgccataaag attttggcgg gaagggtatg cgtatcgtca
    14401 aagatctccg gcagaaaata ttggatggcc cgggtagggt cggtgacata atttccgtcc
    14461 ggcattaact cgagaaaacc gagaaaacga ccaaattctc tcactagttt ttcggtgttg
    14521 ctattgatgg tttcgccagg taaccattta tgcactttgt tggtgatgat cgtaggggaa
    14581 agaggttccc ggcccccgac cgagtgttgc tgaaggctca acaagcaact cagtacccgc
    14641 cacaacggtt cgcaatcatt cccactggca acgccttttt cacgacaagc atcaatcgta
    14701 cagataagca accgatgcgc cagtggacgc acacctgctt caagcggtaa catctttccg
    14761 tcgagcatcg gccagagtcc cagattgcac caaaagctca ggttctcttt taattttctc
    14821 cacgcgttat cgttagcggg caggttatca ggacgatagc gggcgagcag tgtgtcctga
    14881 gacaacggtt cctgtgcgct ttgcagaacg cgttcaatca aaggaagcag tatcagtccg
    14941 cttcctgggt ttgcgttgtt aattattgac atgttgtagt tgcctgataa aagagtccag
    15001 cgacagcgca ttagcggcac ttgcgcacca tgttcgatgt gggaactgag gatcggcgag
    15061 atgctcaggt gcaataataa ttcgctcaaa gcgcgtcatg ggtagatctg ggaacgcatt
    15121 agccgtgtta gggatgatca cgatctctgg tccatccgat gcaggtgctg tcattttctg
    15181 tgcgctccag aaatgcgaaa gcgaatctag gttgttctct agttgcagga acactgctct
    15241 gtctgcacga ataaacacgt attcgccaga ggtgatcagt gatcgcaacg tcacacgaag
    15301 ttccatcaac aacgaatgta acttcatatt ttcgttgtaa taaactttct tttccgcacc
    15361 tacgaagagt gcttttttct tcggctcgga acgtaaaatt tgtacatctg tgcccacggt
    15421 gggcgaaaac gcccttttcc ctttctggcg acatcccgga caaccaccac aggttaactc
    15481 gggaggatgg ctctgatatt catagaattt ctgcagaatt ttacacagtg gtttgccagg
    15541 atcctccaac cacgtttcca ttaccgtaaa ggctgcccgg cggttattca actcggactg
    15601 gcggatcttc tccacatagg tgttccagtg cgcttctgaa taatgcgcat cgtcacagtg
    15661 acggatatgt acgtggttat agtagctttc gaaccattca atcagttgcg tgttgttgtc
    15721 atccagatta tctcgcaggt cgtcaggaat tttcggttca gcaaagacca gtttgatgag
    15781 tccggctctt tgcattaaca gcaacgtccg acgattccaa gcttcgtttt tatcgccttg
    15841 gtgatcgata tgaacgggct tggtgttcag tgaaatcatg tagtcagcga tcgggctttt
    15901 cttacgatcg tcaaacattg ctttccagcg ggcaaaacct ttttctacgc caatcagcgt
    15961 ctcaacggcc agcgattttg ccgttttcat ttgcgcctta tgccatacca gatgcacctg
    16021 gcaggatctg ccgtcacgcc cagcacgtcc acagtcctgg taatagcggt cgatattttc
    16081 cggaatagca gcatgaatga tgctgcggat ttccttttta ttcatcccta ccccaaaggc
    16141 agaggtagcg accatgatat cgagttggtc atttttccat tttgaaatca atttcttgcg
    16201 attgtttgtg tcaatttgac cgtggaatat gccgattcgc cagtagccca gttcgttcag
    16261 acgggcagac cacatttccg catctgtgcg ggtagtgcaa tacaaaatca gcgggcgggg
    16321 taaggtcatc agaagttgtt cgacccgctg acgatgcgcg ttttcatttg cctcatgatg
    16381 cacaaaatat tccggctctg ggcgtaggaa attagctgat acttcaatca gttcactgtt
    16441 ttcatcatgg aactgctcga ccagaatgtc gcgggtactt ttgctgtaag tcgccgaaag
    16501 cagcagcgta cgaaaacggc atttgcccat ggctttcagt gagcgaatca taggggcaat
    16561 tagctgaaag tcagggcgga actctgcgcc ccattgatcg atcaaatgcg cttcgtctat
    16621 gacaatcgcg ccaatcatat tcagtctgga aagctcaaac agcaacggaa ccaaagaaga
    16681 gcgaacggat tctggggaac agaagagaac acgctgtgtt cccgctttga ttctttcctt
    16741 aattgcctga cgcgagggct gatcttggcc tccgatccaa acataacttc caccatgatc
    16801 ttggtcagca ccgcgaagca gtttttgcat atcgtcagcc tgctcaatcg cgagggcgac
    16861 agtggggacg atcaccagcg tgagggtgtt tgtcggtgcg ctgagcgcct ggagttgggt
    16921 gagcagactt ttaccgcaac tggtgggcag attaaccagc aatgtacagt tattatcaga
    16981 cgttagcagc gtccggatgg cggcctgttg accgaatccc tgatagtgag tcagccatgg
    17041 ctcttcgggt aacaggcgcc tcagtgccgg atcagtctcg gggcgcagca agttcctgcg
    17101 tatcttacgc tgataggtgg ctctggtcag cgccaggtcc gactcttcag ccagttgaat
    17161 ttgttgcacg gcaggcaact ttgtcatgcc ccactcaggt gccggagcat cggtcagttc
    17221 tggcggcagg ggtagccacg gctcgctaat accactcgcg tgagcggcac gtaacgcatc
    17281 ggcgtagccg gcaaaaatgt caccatgacc tgccgaggca tcggtgatga tctgaatcag
    17341 tctgttcaga aactgatttt cgatgccatc tttaaaggtg accccttgac taaaataggt
    17401 ggttagcgcc tgctgcaggc gtgaccattc ctcttccatc agacgatttc ctctaataga
    17461 tttctgctgc acaccaccac ggctttcacg gccattaact gaagtctggc ttgttcgccg
    17521 aaggttgcct gttgttgttc tcggtcactg gtatagactc gttccaccat ctctttccac
    17581 gtgtccggtg agacaagttc ttcgatttct tgccaaagat tagggcgcag atttatatct
    17641 gcatagaatt tctgcgatgt ttcatgtttg gcgtactcgc cattgagcag ttccagcaac
    17701 tgcggattta tcaccggtgt accattagag gacagccagt gttgcacaat tcgcggcggg
    17761 tacaactcgt ctgcaatacg gcgttgtgcg taggtatcct gcttctggca atgggtgaca
    17821 agccaagttg actgaaagaa gtaattgggc tcattcagtg gcttggggag cactcgcagt
    17881 accgccatgg aactgcctcg ggcatcttgg tttaacagtt gccagatcgt atcgacaaat
    17941 ggctgcccat aacgcagcgg gtaaacggtt gttccgtcga tcgccggaat gcgttcagcg
    18001 ctcatcagat gcgttgacgg tgggttgccc ccttctttat cgaagctgag catgcaggtg
    18061 gtgagaaagg ttttaaaatc gaccagcgtc cctgtgctgc gatcagagag ttcgaactga
    18121 aacttgatac ctttttctgc agtgccggtg gtgcgaaaac gtagcacacg cgtgatccaa
    18181 cttgtcagtg cattacactg cgctactgca agatgatcgt cagcgctgat ctgttgcgca
    18241 aaaatcgccg cctctgcaat ctcatcatcc atcgccagca gcttttcctg catgttaatt
    18301 ttatgcgttt cattggccag aatgccctgt tcgccaggga attctctggc aacacgttca
    18361 agggccaccg ggccttcttg gtagacattt tgccacgcat tttctagata atcgtcgagg
    18421 acgaactgga ggctggcgat tgtgttatta aatacgccaa tatagtcttt cagaatgcgg
    18481 gcccacacgt tgcgtaatcc acagtcggcg tgatttttca ggatcagact ctggacaggt
    18541 tttacgcctt tcaggtttgc actgtacctg ttcagacgac caaggcgctg ttcaatacga
    18601 ctacaagagc gcggtaaacc gtagtgaacg gctagtcgca gccccccatg gagattcaga
    18661 ccatcttcgc cgcttttatc gcaaattagg atccgaatag ggctgccggg tttgaggtac
    18721 atcaagggat gacccggctg atagagttcc tgggggtact ccagcagtag ttcgagcttt
    18781 attgccaagt gttgggcaag atccggacga tcgcagaaga cgattgcttt tcctgtcgga
    18841 ttcttttgca accactcatt cagtgtgatg gcaagcttgt aatcaatggc ctgtagttca
    18901 ttttttgcag ttgaaacaat gtgctctaac agatctcgtt cttcctgagt gcgttccgct
    18961 tcacccaaat gtactttagc gcgttgcata acacagagtg ggctggatag gagatcgtca
    19021 acccagaaga ggtacgtgtc ttcactcatt gcccactgcg tattctgcgg cagtaaagat
    19081 aatgaacgat actcatcaat cagttcgtct aatgctaacc catcgcaata ccagcggcac
    19141 tcctctgctc catttagccc aggaaacaga aggtttagat tgaggttttt cgtttcatcg
    19201 aagctgagtg aaacctgacg gcgattacgc aacagtcgat gatgaatgcg atagttttcc
    19261 cccaagtgcc ggcgaatatc ccggatccct tcttcacgct ccggcgtatt gggggagaac
    19321 gtcccaataa gcggaatgag ttgctggcag agcgtcatca gaacagtatc ttctgggaac
    19381 tgctgctgca gtgtttccag attacgacgt aagctgacgt ttgagacgga aggtactaac
    19441 cccgagaaga tcccgccaag gttttcgcga tttttgacta gttcggtaaa gtcttgcaga
    19501 tgggtctcat ccacttggta ggcttccgga ttaatacagt gcagcatcga caagaagttc
    19561 ctttcatgcc catgcagagg ggtccccgtg agtaacagaa cgtagtgggc tttccggcac
    19621 ccctctgcga tcaggttgaa gtcataacgt tcatctttat ctcctgacca cggccaagag
    19681 gcaatctggt ggacctcatc tactgcgata agtgaagggg tgaatccccg ttcaatcagg
    19741 gtacagccat cgcaatgact gcaaatcacg atgccttccg tggcctcatt ttgtcgcaaa
    19801 cctgcgaggg ccgtcgaagc atcaataata agttgtttca gttgaaaacg ttcagccagt
    19861 tcttcccgcc actggctaac tagtggtgcc ggaaccgcaa taagcatgct gacgtggcca
    19921 gttgcttcta acgcgtgttc acggatgacc attcctgctt cgatggtttt ccccagccca
    19981 acctcatcgg ccagaatata cttggggttt ttatcctgaa gtacacggcg tactaccgcc
    20041 aattggtggg gttcgagttc aacggcacta ctagaaatgg atgccatcgc gcggcatgca
    20101 gcgcgttgct ggatgtaggt ttcaataaag gcttggcggt aagggaaaaa gaacggtgcg
    20161 tcattagctt ggagggcaag gaaatctgca gggtttatcg gggtatccgg cgctttgttc
    20221 agaacaaaaa tttcgtcgat tggcagcgtc gtagtttcat cttcgcgaaa gatgacgaga
    20281 aaatcccctt tggggcgcga tccgccaaac cgggctctag tccatcgttg gctatgtggc
    20341 tcaatgcaat aaattaccgt ctcttcgtgc gggattgtca gggtgagttg ttctaaagga
    20401 actttcattt gtcgtgcata aggttgagcc ggtgactcaa aaaaagcgac cgtggcgtta
    20461 tttgtatcac tatcgacggt gacaacttta ccgatgcctt caaattgctc agagataacc
    20521 agtgacccga tgggtaatac gttcatcctc acatccttga attgtttctt ataatcacat
    20581 ttgctcaaaa acaaccaaag acagaccgaa aatgttactt tgctatgcct gagcgacatg
    20641 cttataagtg cattgatttg agtattatga tcaggatact gagataattc tcatattcaa
    20701 gggggaaagt agaaaaagat caatgagatg ttggcttgtg taggggagat ttcagcgata
    20761 tcaattttat ctgttacaat gagtattttt caatctacta atgtaggctg gatgaat
//
LOCUS       DAPGWB010000077        20211 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.077, whole genome shotgun sequence.
ACCESSION   DAPGWB010000077 DAPGWB010000000
VERSION     DAPGWB010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20211
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.077"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(373..1569)
                     /gene="hemY"
                     /locus_tag="RHX79_002690"
     CDS             complement(373..1569)
                     /gene="hemY"
                     /locus_tag="RHX79_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX biogenesis protein HemY"
                     /protein_id="HDV2197843.1"
                     /translation="MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGL
                     AIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQ
                     VEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
                     RLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHV
                     GDEEHRAMLEQQAWIGLMDQARADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIEC
                     DDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTL
                     GQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAAMRRDGLMLTL
                     QNNPPQ"
     gene            complement(1572..2783)
                     /gene="hemX"
                     /locus_tag="RHX79_002691"
     CDS             complement(1572..2783)
                     /gene="hemX"
                     /locus_tag="RHX79_002691"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDV2197844.1"
                     /translation="MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAI
                     AIALAAGVGLYGWGKQQAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLK
                     QANRQQETLAKQLDEVQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAA
                     LLKSADASLADMNDPSLITVRRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRL
                     ADNDSDGSPMDSDGEELSSSISEWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQD
                     IYLRENIRSRLLVAAQAVPRHQEETYRQALENVSTWVRAYYDTDDATTKAFLDEVDQL
                     SQQNISMDLPETLQSQAMLEKLMQTRVRNLLAQPAAGTTEAKPAPAPAPAPAPAPAPQ
                     GDTPAAAPQGE"
     gene            complement(2805..3545)
                     /gene="hemD"
                     /locus_tag="RHX79_002692"
     CDS             complement(2805..3545)
                     /gene="hemD"
                     /locus_tag="RHX79_002692"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDV2197845.1"
                     /translation="MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLA
                     DQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQK
                     ILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQR
                     CAIHYDGAEEAMRWQSREVTMVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERL
                     AKLARELGWQDIKVADNADNDALLRALQ"
     gene            complement(3542..4483)
                     /gene="hemC"
                     /locus_tag="RHX79_002693"
     CDS             complement(3542..4483)
                     /gene="hemC"
                     /locus_tag="RHX79_002693"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDV2197846.1"
                     /translation="MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTR
                     GDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICERE
                     DPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD
                     NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAA
                     LNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGER
                     RGAPQNAEQMGISLAEELLNNGAREILAEVYNGDAPA"
     gene            4870..7416
                     /gene="cyaA"
                     /locus_tag="RHX79_002694"
     CDS             4870..7416
                     /gene="cyaA"
                     /locus_tag="RHX79_002694"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HDV2197847.1"
                     /translation="MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHY
                     HHPLMPGYLDGNVPKGICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMG
                     STSSVGQSCSSDLDIWVCHQSWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENR
                     FRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTL
                     YAQSVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYP
                     NPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVC
                     EKLSRERACVGWRRAVLSQLVSEWGWDEARLAMLDNRANWKIDQVREAHNELLDAMMQ
                     SYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLT
                     FIYVPPGRANRSGWYLYNRAPNIESIISHQPLEYNRYLNKLVAWAWFNGLLTSRTRLY
                     IKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAF
                     RNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRNSWNEVRTLHFNGEQSMIEALKTIL
                     GKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVS
                     GQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPAVVDGFASEG
                     IIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGS
                     SFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQDHDTPLLQQYFS"
     gene            complement(7456..7776)
                     /gene="cyaY"
                     /locus_tag="RHX79_002695"
     CDS             complement(7456..7776)
                     /gene="cyaY"
                     /locus_tag="RHX79_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HDV2197848.1"
                     /translation="MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFE
                     NGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGET
                     VSFR"
     gene            complement(7824..9137)
                     /locus_tag="RHX79_002696"
     CDS             complement(7824..9137)
                     /locus_tag="RHX79_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001584058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DKNYY family protein"
                     /protein_id="HDV2197849.1"
                     /translation="MKGQIITVALILLGHTFLTPAVQAIGFDYYNDHGVMSYGKGYWG
                     DKKIIAQFPEMSRADLRLVKNISGKTGYIPSDEISIKNEEYHWVTDGRVILWRGKIVS
                     NPPGTPTVDIASFQAMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNSTTLV
                     DSKNLYLSGRRQGSSSNVTVLEKRWWGINPRLMSVNRNLYSNDLLIRSGQNIYLNGVH
                     LTANADSFEIIRWIPHSLLVFRDNKGMHRYPFGQLSGKAIPVDDDVSFEVGESRVRWR
                     KQLTSDRQWSKWIDLPGIEPEQFHLITGNIAQYKDRLYVTKLSIFGEDQLEIIPLDTP
                     DLVIDRSFNGGKQHAYFIRQLRSKSLQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRI
                     TPSPCPAKTRVREENVREVQNRDIIIPVTDESCRNAAAEVQTLKP"
     gene            complement(9134..10612)
                     /locus_tag="RHX79_002697"
     CDS             complement(9134..10612)
                     /locus_tag="RHX79_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001659238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DKNYY family protein"
                     /protein_id="HDV2197850.1"
                     /translation="MHYRNVVCLLSCSLFLSSAWGCRLDPPEHNIYQKQGKGVVYLRP
                     YKETNLSLPDVNYKSLRRLPNLLIDPTTLDKWDKVPPLTDLTTDYLYEGAQAWYPHYS
                     WHSDGRYILYAGEVVQNPPDKPPVDVASFKAWGDFAADKHSLYFEGKRTDNNGGGNRL
                     DIKTLHQVEFRPPWDPDLLGLILRDANFLYINGHRLADPDSFRVLAQKSWDQRGKFST
                     AFNPCVAMPFGPWDTLARTRTKILINGEQLDADPDTFSVVRWMPGSLLTWRDKNGLQR
                     KVLDKENLEWDEDLTKHCLDFSLLEKKVFWRKGPACKQEELPGLDPEQFQPISDAVAQ
                     YQDSLYTIIETESGDRKLEIVKLDDPNLIINKRFNAGKRHGYLLTRAEGWPYHSGLHV
                     FESDGPLILLDNRSPDEREAHLNDHPFLRRWYARDNRYIYSFDGAQLWRYRTADPKQV
                     RLIWKEQHSGYGYGVNYKTGYLDGKITDDGEFIPAPRNEATK"
     gene            complement(10980..11534)
                     /locus_tag="RHX79_002698"
     CDS             complement(10980..11534)
                     /locus_tag="RHX79_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000522548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3304 domain-containing protein"
                     /protein_id="HDV2197851.1"
                     /translation="MGLFTQLEKFDQKLTRGYARWGCWVWRTLIVVPVLVVLWNIGQA
                     VWGGPRGGVILEIHSEIDRPILGFSVNGVVGANAFANGGGSTTCCGDVSGDTAEVIWT
                     LSTTRTQYNAGMRLEKRNMTLPLPKREWGEDFLHVHFMPGDKVLLGWSKDSFSPYEDL
                     HNGGYKTRVRQDVKDKLYGTGKMN"
     gene            11884..12087
                     /locus_tag="RHX79_002699"
     CDS             11884..12087
                     /locus_tag="RHX79_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV2197852.1"
                     /translation="MKNVFKALTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVET
                     QTQSTVPDKNDRATGDGPSQVNY"
     gene            12124..12948
                     /gene="dapF"
                     /locus_tag="RHX79_002700"
     CDS             12124..12948
                     /gene="dapF"
                     /locus_tag="RHX79_002700"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDV2197853.1"
                     /translation="MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQ
                     LLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG
                     RMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC
                     VIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACG
                     SGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL"
     gene            12945..13652
                     /locus_tag="RHX79_002701"
     CDS             12945..13652
                     /locus_tag="RHX79_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 domain-containing protein"
                     /protein_id="HDV2197854.1"
                     /translation="MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVP
                     HPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSL
                     DDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ
                     HYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLH
                     EIALMLPELLERWIERV"
     gene            13649..14545
                     /gene="xerC"
                     /locus_tag="RHX79_002702"
     CDS             13649..14545
                     /gene="xerC"
                     /locus_tag="RHX79_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HDV2197855.1"
                     /translation="MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENG
                     LQSWQQCDVTVVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVS
                     APKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHL
                     DLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISAR
                     NVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYT
                     HLDFQHLASVYDAAHPRAKRGK"
     gene            14545..15261
                     /gene="yigB"
                     /locus_tag="RHX79_002703"
     CDS             14545..15261
                     /gene="yigB"
                     /locus_tag="RHX79_002703"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase YigB"
                     /protein_id="HDV2197856.1"
                     /translation="MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHP
                     ALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAM
                     INFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHG
                     RSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTW
                     DSRLLPHLEISRLASLTSLI"
     gene            15345..17507
                     /gene="uvrD"
                     /locus_tag="RHX79_002704"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             15345..17507
                     /gene="uvrD"
                     /locus_tag="RHX79_002704"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HDV2197857.1"
                     /translation="MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIA
                     WLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH
                     MDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ
                     SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNIL
                     VDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAET
                     IRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVV
                     NRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL
                     SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL
                     AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN
                     LEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTMHSAKGLE
                     FPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE
                     VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFG
                     EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV"
     gene            complement(17654..18418)
                     /locus_tag="RHX79_002705"
     CDS             complement(17654..18418)
                     /locus_tag="RHX79_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HDV2197858.1"
                     /translation="MAHRLLIGKGMITLNLKRIFLTLTLLPLFAVAADDCALSDPTLT
                     VQAYTVNPQTERVKMYWQKANGEAWGTLHALLADMNSQGQVQMAMNGGIYDESYAPLG
                     LYIENGQQKVALNLASGEGNFFIRPGGVFYVAGDKVGIVRLDAFKTSKEIQFAVQSGP
                     MLMENSVINPRIHPNVASRKIRNGVGINKHGNAVFLLSQQATNFYDFACYAKAKLNVE
                     QLLYLDGTISHMYMKGGAIPWQRYPFVTMISVERKG"
     gene            18788..19738
                     /gene="corA"
                     /locus_tag="RHX79_002706"
     CDS             18788..19738
                     /gene="corA"
                     /locus_tag="RHX79_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDV2197859.1"
                     /translation="MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQS
                     ELGQSLATRPELEDIEASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLF
                     TLRERELPAFRLYRMRARSQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSR
                     VIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQARE
                     ILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSY
                     GMNFEFMPELKWSFGYPGAIIFMILAGLAPYLYFKRKNWL"
     gene            complement(19792..20202)
                     /locus_tag="RHX79_002707"
     CDS             complement(19792..20202)
                     /locus_tag="RHX79_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001358519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF943 family protein"
                     /protein_id="HDV2197860.1"
                     /translation="MRPVQILYTYSDAGNSVFLVVDHLPWTDSDKINWYLKHQNEIKN
                     QHPLPEGSWHTWYVIDIGNGFTDYKKYIEGPYEDLYCFPTIKSNDNCIVKNYLMVINE
                     YPYRNTHIGINDFTEYQLTQENKIERVFNPHDFK"
BASE COUNT         4732 a         5225 c         5228 g         5026 t
ORIGIN      
        1 ctcaggttaa atattcactc aggaagttat tactcaggaa gcaaagagga ttacagaatt
       61 atctcataac aagtgttaag ggatgttatt tcccgattct ctgtggcata ataaacgggt
      121 agatgctcat tccatctctt atgttcgcct tagtgcctca taaactccgg aatgacgcag
      181 agccgtttac ggtgcttatc gtccactgac agatgtcgct tatgcctcat cagacaccat
      241 ggacacaacg ttgagtgaag cacccacttg ttgtcataca gacctgtttt aacgcctgct
      301 ccgtaataag agcaggcgtt tttttatgca tcagaaaggt cccggaggtg cttgcctccg
      361 ggtgagaagg aactactgtg gtgggttgtt ctgcaacgtt aacatcaaac cgtcgcgacg
      421 catcgctgca gcttcttccg gcttgtgcag tctgtccagc gcgtcggcaa gccatgcgta
      481 atcgtaggcg tccggacgtt gtttcagcgc cgcgcggaag gcgagcgatg cttcctgcca
      541 ttctccgtgc ttcatcagtg actggcccag tgtgctccac aacagcgggc gatcgccgac
      601 gtttttgatc tgctggcgca gcactttttc cagctgttcc ggattgttgg ttttcagtcg
      661 aggaatcggc agcagtaggc gatcgtcgta ctggcgtttc aggccatcga tgataatttg
      721 ctgggcagta tcatgatcgt cacattcaat aagatgttcc gccattgcca cctgcaacgc
      781 tacctgatga cgcgttttcc ggctttggtt tttccaccag ttacgcaaac cttcactacc
      841 gttatcggca cgcgcctgat ccatcaggcc aatccatgcc tgttgttcca gcattgcacg
      901 atgttcttca tcaccaacat gggctttcgc cattgatggg atgatatcca gcagagaact
      961 ccatgcacct gtgcggatat acgcctgttc cgccagacgt aatacttccg gatggcgtgg
     1021 cgtaacttcc agcagcttat ccacgccgtg gcgtgcagca tggttttcat tacgggccag
     1081 ttgcagacgt acacgggtga tttctaccgg aatggtgtca ttgccggcca gctctgctgc
     1141 gcgttccaga tgttggttgg cgcgtgcttc atcaccacgt tgttgcgcgg cttcggcagc
     1201 cagtagatag ttcaccaccg gttgttccgc gtgatcggca tttttcgcca tcagcttttc
     1261 aacttgctga taatcgcctt ccgccagttt cagcagcgcc tgttcggtct gcttacgggc
     1321 acggcgacgc ttacgtccga caaaccaccc acgggtgtgt gcgcctgtgc ggaagatccg
     1381 ccgcagtagc cactcaatgg caaacagcac taccatcgcc agaatcaaaa taatcgccag
     1441 gcccgtgacg ctggtttcga tattgtagtt gtcagtctgg atcagcacgt aaccctgatg
     1501 accggcaatc atcgggccaa ccactatccc cgcaatcagc aaaacaaaga gtaataacac
     1561 ttttagcatg gttattctcc ttgcggcgcg gctgccggag tatcaccttg cggtgcaggt
     1621 gcaggtgcag gtgcaggtgc aggtgcaggt gcaggtttag cttccgttgt ccccgctgcc
     1681 ggttgtgcca gcaggttacg cacgcgggtc tgcatcagtt tttccagcat cgcctggctt
     1741 tgcagggttt ccggaagatc catcgagata ttttgctggc ttaactggtc cacctcgtcg
     1801 aggaacgctt tggtggtggc atcatcagta tcgtagtaag ctcgtaccca ggtggagacg
     1861 ttctccagcg cctggcgata agtctcttcc tggtgacgcg gtacagcttg tgctgcgacc
     1921 agcaggcgag agcgaatatt ttcgcgcaga tagatatcct gatttggcgc taacagcggt
     1981 acggcggtgt catcacgacg gcgaatcgta atgaagttgt ccataaagtt ctgccagctt
     2041 ttttgcagat tgatacgcca ttcgctgatg gaactggaaa gctcttcacc gtcggaatcc
     2101 atcggcgaac catcgctgtc attatcggcc agacgcaggt tatctacctg atttgaaagc
     2161 tgattaagct taaggatgat gccgtcataa tccacctgcg aaactgcaga aaggctggcg
     2221 atatcatcgg taattgcccg acgaacggta atcagactcg ggtcattcat atccgccagg
     2281 ctggcatctg cacttttcag caacgctgca gcggtcgtga cgtcctgatc gctccacagc
     2341 ttccgtccgg cgagtttcac cagaaaatcg gcctgagcca gcagccaggt tttagcatcg
     2401 ctgccggaaa tggtggcgac cttttgttgg acttcatcca actgttttgc cagcgtttct
     2461 tgctgacgat tcgcctgctt aagctgtgca gcttgttgct taataatgcc ttccagctcg
     2521 gctttttggc tctcctgggc tttttgcaat gccgtcagtt ggttagccag ggcatcgctg
     2581 gtggcggtct gattgacggc ctgttgttta ccccagccat acaaaccgac gcccgccgcc
     2641 agagcaatag cgatagccac cgcgctgaga atcaatgcgg tattgttctt actctttttt
     2701 tctgttgcga caggttgtga cgtggtgtcc acggcctccc tggtctcttc aaccacggcg
     2761 gaggtttttt cttgttccgt cattatggct tcctgttatg agagttattg taatgcccgt
     2821 aaaagcgcat cgttgtcagc gttatcggcg accttaatgt cttgccagcc cagttcccgg
     2881 gcgagtttcg ccaaacgctc actgacgacc aatagtcgac agtgtagtaa ccagtgctca
     2941 cgataccatt gtgggatcag cgaccagagt tgctgcaaca tttcaccgct ggtaacaacg
     3001 accatcgtca cctcgcggga ttgccagcgc atcgcttctt ctgcaccatc gtaatggatt
     3061 gcgcatcgtt gataacattc acaaaaagtg acctcagcac cgcgcgctgt cagggtatcc
     3121 ccaattagct cacgaccgcc attgccacgt aatatcagcg cacgtttgcc cgcaatattt
     3181 tgtaattcag gtaattgtag caagacttcg ctgatttccc gatcctgcgg gtagagaatc
     3241 ttctgtccgc ttacggtatg tagcgccagt gcggtggtgc gtccaatggc gaaataatca
     3301 ggtagtcggg gccatttacg atcttgctga tgcagctgtg attgggcaaa agcaaccgcg
     3361 tgttgcgaga gggcaaacaa cagatcgctc tcccccagcg ccgccagttg atcagcaagt
     3421 tgcggtaatt gtcgacccgg agaaaactca atcagcggaa aatgccaggc cacctgcccc
     3481 agtgtgcgca gacggctcac taactcttct ccagcgggag acgggcgggt gaccaggata
     3541 ctcatgccgg ggcgtctccg ttatagactt cagcgaggat ctcgcgcgcg ccgttattca
     3601 gtagctcttc tgccagcgaa atccccattt gttcggcatt ttgcggcgca ccgcggcgtt
     3661 caccgcgaat aatctgcgaa ccgtccggcg cgccgaccag cgcacgcagc cagatttcac
     3721 catcaataag ctcggcgtag ctaccaattg gcacctgaca tccaccttcg agacgggtat
     3781 tcatggcgcg ttctgcggta acgcgcagtg cagtttcgtg gtgattcagc gcggcaagca
     3841 gctcgcgagt gcgcgtatca tcaaggcggc attcaatacc gactgcacct tgtcctaccg
     3901 ccggaagaga aatctcgggt ggtaacgcgg cgcgaatgcg ggactccaga cctaaacgtt
     3961 ttagtccggc tacggcaaga atgatggcat cgtattcgcc gttatctagt ttgctcaggc
     4021 gagtgccgac gttgccgcgc agggagcgga taatcagatc cgggcggcgt tcagccagtt
     4081 ggcactggcg acgtaaactg gacgtcccga cgatactgcc tgccggtaac gcatccagac
     4141 tgtcataatt attggacaca aaggcatcgc gaggatcttc acgctcacaa atagtgacca
     4201 accccagacc ttgcgggaat tcaaccggca catctttcat tgaatgtacg gcgatatcgg
     4261 cgcgattctc caggagcgcg acttccagct cttttacaaa taagcctttt ccgcctactt
     4321 tcgccagcgg cgtatcaaga atcacatcgc cgcgcgtcac catcggtacc agttcaacca
     4381 ccaggcccgg atggctcgcc atcaacttgt ctttgacata gtgtgcctgc cagagtgcaa
     4441 gtgggctttg gcgtgtggca attcttaaaa cattgtctaa catgcttgtt accgtcatta
     4501 tcatccgtgg tccatcctaa catccttgcc agagtgatgt cagtgttgtg gtgaaacgta
     4561 gacgcctgcg caaaccgtaa aatgaggtct ggcagtggat cctgacaggc gtttcacgcc
     4621 gtcgtaataa ggaatttaca gagaataaac ggtgctacac ttgtatgtag cgcatctttc
     4681 tttacggtca atcagcaagg tgttaaattg atcacgtttt agaccatttt ttcgtcgtga
     4741 aactaaaaaa accaggcgcg aaaagtggta acggttacct ttgacatacg aaatatcccg
     4801 aatgccgcgt gttaccgttg atgttggcgg aatcacagtc atgacgggta gcaaatcagg
     4861 cgatacgtct tgtacctcta tattgagact ctgaaacaga gactggatgc cataaatcaa
     4921 ttgcgtgtgg atcgcgcgct tgctgctatg gggcctgcat tccaacaggt ctacagtcta
     4981 ctgccgacat tgttgcacta tcaccatccg ctaatgccgg gttaccttga tggtaacgtt
     5041 cccaaaggca tttgccttta cacgcctgat gaaactcaac gccactacct gaacgagctt
     5101 gaactgtatc gtggaatgtc agtacaggac ccaccgaaag gtgagcttcc aattactggt
     5161 gtatacacca tgggcagcac ctcgtccgta gggcaaagtt gttcctctga cctggatatc
     5221 tgggtctgtc atcaatcctg gctcgatagc gaagagcgcc agttactaca acgtaaatgt
     5281 agtctgctgg aaagctgggc cgcctcgctg ggtgtggaag tcagcttctt cctgattgat
     5341 gaaaaccgct tccgtcataa tgaaagcggc agcctggggg gcgaagattg tggctccacc
     5401 cagcatatac tgctgcttga cgaattttat cgtaccgccg tgcgtctcgc cggtaagcgt
     5461 attctgtgga atatggtgcc gtgcgacgaa gaagagcatt acgacgacta tgtgatgacg
     5521 ctttacgcgc agagcgtgct gacgccaaat gaatggctgg atctcggtgg cttaagctcg
     5581 ctttctgctg aagagtactt tggtgccagc ctttggcagc tctacaagag tatcgattcc
     5641 ccatacaaag cggtactgaa aacactgctg ctggaagcct attcctggga atacccgaac
     5701 ccacgtctgc tggcgaaaga tatcaaacag cgtttgcacg acggcgagat tgtatcgttt
     5761 ggtctcgatc catactgcat gatgctggag cgtgttactg aatacctgac ggcgattgaa
     5821 gattttaccc gtctggattt agtacgtcgc tgcttctatt taaaagtgtg cgaaaagctc
     5881 agccgtgaac gcgcctgcgt aggctggcgt cgcgcagtgt tgagccagtt agtgagcgag
     5941 tggggttggg acgaagctcg tctggcaatg ctcgataacc gcgctaactg gaagattgat
     6001 caggtgcgtg aggcgcacaa cgagttgctc gacgcgatga tgcagagcta ccgtaatctg
     6061 atccgctttg cgcgtcgcaa taaccttagc gtctccgcca gtccgcagga tatcggcgtg
     6121 ctgacgcgta agctgtatgc cgcgtttgaa gcattaccag gtaaagtgac gctggtaaac
     6181 ccgcagattt cacccgatct ctcggaaccg aatctgacct ttatttatgt gccgccgggc
     6241 cgtgctaacc gttcaggttg gtatctgtat aaccgcgcgc caaatattga gtcgatcatc
     6301 agccatcagc cgctggaata taaccgttac ctgaacaaac tggtggcgtg ggcatggttt
     6361 aacggcctgc tgacctcgcg cacccgtttg tatattaaag gtaacggcat tgtcgatttg
     6421 cctaagttgc aggagatggt cgccgacgtg tcgcaccatt tcccgctgcg cttacctgca
     6481 ccgacaccga aggcgctcta cagcccgtgt gagatccgcc atctggcgat tatcgttaac
     6541 ctggaatatg acccgacagc ggcgttccgc aatcaggtgg tgcattttga tttccgtaag
     6601 ctggatgtct tcagctttgg cgagaatcaa aattgcctgg taggtagcgt tgacctgctg
     6661 taccgcaact cgtggaacga agtgcgtacg ctgcacttca acggcgagca atcgatgatc
     6721 gaagccctga aaactattct cggcaaaatg catcaggacg ccgcaccgcc agatagcgtg
     6781 gaagtcttct gttatagcca gcatctgcgc gggttaatcc gtactcgcgt gcagcaactg
     6841 gtttctgagt gtattgaact gcgcctttcc agcacccgcc aggaaaccgg gcgtttcaag
     6901 gcgctgcgcg tttctggtca aacctggggg ttgttcttcg aacgcctgaa tgtatcggta
     6961 caaaaactgg aaaacgccat cgagttttat ggcgctattt cgcataacaa actgcacggc
     7021 ctgtcagtgc aggttgaaac caatcacgtc aaattaccgg cggtggtgga cggctttgct
     7081 agtgaaggga tcatccagtt cttcttcgaa gaaacgcaag acgagaatgg ctttaatatc
     7141 tacattcttg acgaaagcaa ccgggttgag gtgtatcacc actgcgaagg cagcaaagag
     7201 gaactggtgc gtgacgtcag tcgcttctac tcgtcatcgc acgaccgctt cacctacggc
     7261 tcaagcttca tcaacttcaa cctgccgcag ttctatcaga ttgtgaaggt tgatggtcgt
     7321 gaacaggtga ttccgttccg aaccaaatct atcggtaaca tgccgcctgc caatcaggat
     7381 cacgatacgc cgctattaca gcaatatttt tcgtgatgaa cgtgccggaa agcgaggctt
     7441 atccggcatg caatcttagc ggaaactgac tgtttcaccc gcctgctgcg tcgccgcctg
     7501 ttccagcaaa tcccagaagg tttcgccgct gcgatcgcaa atccactcat cgcctttcag
     7561 atcaaaatgg tagccgcctt gtttggttgc cagccatacc tggtgcagcg gttcctggcg
     7621 gttgataatg attttgctgc cgttttcaaa ggtaatggtc agcacgccgc cgttgatttc
     7681 gcagtcgata tcgctgtcgc catcccagtc gtccagacgc tcttcaatgg tcagccacag
     7741 ttgatcagcc aggcgatgaa attcactgtc gttcattgtt gtatcctgtt tttaagtgat
     7801 ggcggcagta tagcggcatg gggtcagggc ttcaaagttt gcacctctgc tgctgcgttc
     7861 cggcatgatt catccgtcac cggaataatg atgtctctgt tttgaacttc acgtacgttc
     7921 tcctctctga cacgagtttt cgccgggcag ggggagggcg taatccttac ctctgtatcg
     7981 gtccatgtat aaacattgcg atcgtcataa gcgaagcgat cgtttttagt tagcggaccg
     8041 ttaactggaa taatttgcaa gctctttgac cgtaattggc ggataaagta agcatgttgt
     8101 ttgccgccat taaatgagcg atcaatgacc aggtctggcg tatccagcgg gattatctca
     8161 agctggtctt caccaaatat cgataatttt gttacataca gccgatcttt atattgcgca
     8221 atattgccag taatcagatg aaattgttca ggttcaatac ctggtaggtc tatccacttg
     8281 ctccactgac ggtcggacgt gagctgttta cgccagcgaa cgcgactttc ccctacttca
     8341 aaagagacgt catcatctac gggtatcgct ttgcctgata attgaccaaa gggataacga
     8401 tgcataccct tattgtcgcg aaaaaccagc agtgaatgag gtatccagcg aattatctca
     8461 aatgagtctg cattcgccgt aaggtgaacg ccatttaaat aaatattctg cccactgcgg
     8521 ataagcagat cattggaata caaatttctg tttacactca taagacgtgg attaataccc
     8581 caccatcttt tttctaatac agtaacatta ctgctgctcc cctgacgtcg accggacaaa
     8641 tagagatttt tactatccac cagcgtggta gagttacctt cgatagcttt tagtgtcgcc
     8701 agatcaacac gtgacgcgcc gctattactt tcggtgcgct gtccgtcaaa atagaggcta
     8761 tatttatcga ccgcgaagcg gcccatagcc tgaaagctgg caatatcgac agtgggggtt
     8821 cccggtggat tgctaacgat tttgccacgc cagagaataa cgcggccgtc tgtcacccag
     8881 tggtattcct cattttttat gcttatttca tcggaaggta tataacccgt tttcccagag
     8941 atatttttca caaggcgcaa atcggccctg ctcatctccg gaaactgggc aatgattttc
     9001 ttatcccccc aataaccttt accgtaagac ataacaccgt gatcattgta atagtcgaac
     9061 cctatggcct gtacagcagg cgtcagaaat gtgtgtccca acaggatgag tgcaactgtg
     9121 attatttgac ccttcatttt gtcgcctcat tgcgcggggc aggaataaat tcgccgtcat
     9181 cagtaatttt tccgtccaga tatcccgttt tgtaatttac gccatagcca tatcccgaat
     9241 gttgttcctt ccagattaag cgaacttgtt tcggatcagc ggtgcggtat cgccagagct
     9301 gcgcgccatc aaagctgtaa atgtagcggt tatcgcgggc ataccatctg cgcaaaaagg
     9361 gatggtcatt aagatgggct tcgcgttcat ccggagaacg gttatccagt aagatcagcg
     9421 gtccgtcaga ttcaaacaca tgtaaaccgg aatggtatgg ccacccttcg gcacgcgtaa
     9481 gtaaatagcc gtggcgtttc ccggcgttga aacgtttgtt gataataaga ttgggatcat
     9541 caagtttcac gatttccagc ttgcggtcac cagactctgt ttcgatgatg gtataaagcg
     9601 agtcctgata ctgggcgaca gcatcactga tgggttgaaa ctgctccgga tcgagtccgg
     9661 gtaattcttc ctgtttacaa gcaggtcctt tacgccagaa cactttcttt tccagcagag
     9721 aaaaatccag acagtgcttt gttaaatctt catcccactc cagattttcc ttgtcgagga
     9781 ctttacgctg cagcccgttt ttatcacgcc aggtcaagag tgagccgggc atccagcgca
     9841 cgacggaaaa ggtgtccggg tcggcatcaa gctgttcgcc gttgatcagg attttggtcc
     9901 gtgtacgagc cagggtatcc caggggccaa atggcatagc cacacaggga ttaaacgcgg
     9961 tagaaaactt tcctcgctga tcccatgact tttgtgccag cacacggaaa ctatcgggat
    10021 ctgcgaggcg atgcccattg atatacaaga aattagcgtc acgtaatatc agccccagta
    10081 agtcaggatc ccagggaggc cggaattcca cctgatgcag tgttttgata tctaagcgat
    10141 ttcccccgcc attgttatcg gtgcgcttgc cttcgaaata gagactgtgt ttatctgcgg
    10201 caaaatcacc ccacgccttg aacgaggcga catcgacggg aggtttgtct ggcgggtttt
    10261 gcacaacttc acccgcgtag aggatatagc gaccatcgct atgccaggag taatgaggat
    10321 accaggcctg tgcgccttca tagaggtagt cggttgtcag atcagtcaga ggaggtactt
    10381 tatcccattt gtctagtgtt gtcgggtcta ttaataaatt gggtaaacgg cgcaaacttt
    10441 tgtaattcac gtcaggaaga gaaagatttg tttctttata agggcgcagg tataccacgc
    10501 cttttccctg tttctggtaa atattatgtt caggcggatc aagccgacat ccccatgccg
    10561 acgataaaaa caatgaacaa gacaacaaac aaaccacatt gcgatagtgc ataaagccat
    10621 cctggcgcga ggtgccgatc acgaaactac cagcagaaca taattcctcg cacgtaagcg
    10681 taacttttgc ggcaaatcgt cacttttcag aatctataaa ggccatcgct attttctgat
    10741 agttgctggg gtaaacttga ggttttcatt cacgatataa atacgagcta ctgcgccatg
    10801 gtgtgactga tcacgttaaa atgtgccgga ttgacgccgg gaagggtgtc aacatgcgac
    10861 tctgcccacc gttacctact ttattgtctt tcgcgtgttg tacttaggtc ccaccaccgg
    10921 tatctaacat tccccacatt attacgcttt ctgccgaacg tgatttttat agaaatctat
    10981 caattcattt tccctgtacc ataaagttta tctttcacat cctgccgaac gcgggtcttg
    11041 taccccccgt tgtgaagatc ttcatacgga gaaaaagaat ctttactcca ccccagcagc
    11101 actttatcgc caggcataaa atgcacatgc agaaaatctt ctccccattc tcttttgggg
    11161 agaggtaacg tcatattccg tttctccaga cgcattccag cattatactg tgtacgagta
    11221 gtacttaatg tccagataac ctctgccgta tccccactaa catcaccaca acaggttgtt
    11281 gaaccgccac catttgcaaa agcattcgcg cccaccacgc cgttaacact gaatcccagt
    11341 atcgggcggt caatttcact gtggatttcc agaatcactc cacctcttgg tcctccccat
    11401 actgcctgtc ctatattcca caacacgacc agtaccggaa cgacaattaa cgtccgccat
    11461 acccagcacc cccaccgggc ataaccgcgc gtaagctttt ggtcaaattt ttccagttgg
    11521 gtaaatagcc ccatcagatt ttattccctc ttatcacctg gttggcaaag ttgtatgtca
    11581 ctggcgacta aggtcagaca acaaaattgc atggtgcgcc actcttttaa aagctccatg
    11641 ccgacgataa gaacaacgaa caagccaaca aacaaactac attgcgatag tgcataaagc
    11701 catcctggcg cgaggtgccg atcacgaaac taccagcaaa acataaatcc ccacgagtaa
    11761 gcgttatact cgcagcattt cctcactttt cagacttcat aaagagtcgc taaacgcttg
    11821 cttttacgtc ttctcctgcg atgatagaaa gcagaaagcg atgaacttta caggcaatcc
    11881 ataatgaaaa acgtgtttaa ggcactcact gtattactta ctctcttcag cctgacgggc
    11941 tgcggtctga aaggtccgct ctatttcccg cctgcagata aaaacgcacc gccgccgacc
    12001 aaaccggtag agacgcaaac gcaatccacg gtgccggata aaaacgatcg cgccactggc
    12061 gatggtccat cccaggtgaa ttactaaaag tcagtttctg tacccgcgtg attggagtaa
    12121 atgatgcagt tctcgaaaat gcatggcctt ggcaacgatt ttatggtcgt cgacgcggta
    12181 acgcagaatg tctttttttc accggagctg attcgtcgcc tggctgatcg gcacctgggg
    12241 gtagggtttg accaactgct ggtggttgag ccgccgtatg atcctgaact ggattttcac
    12301 tatcgcattt tcaatgctga tggcagtgaa gtggcgcagt gcggcaacgg tgcgcgctgc
    12361 tttgcccgtt ttgtgcgtct gaaaggactg accaataagc gtgatatccg cgtcagcacc
    12421 gccaacgggc ggatggttct gaccgtcacc gatgatgatc tggtccgcgt aaatatgggc
    12481 gaacccaact tcgaaccttc cgccgtgccg tttcgcgcta acaaagcgga aaagacctat
    12541 attatgcgcg ccgccgagca gacaatctta tgcggcgtgg tgtcgatggg aaatccgcat
    12601 tgcgtgattc aggtcgatga tgtcgatacc gcggcggtag aaacgcttgg tcctgttctg
    12661 gaaagccacg agcgttttcc ggagcgcgcc aatatcggtt ttatgcaagt ggttaagcgc
    12721 gagcatattc gtttacgcgt ttatgagcgt ggggcaggag aaacccaggc ctgcggcagc
    12781 ggcgcgtgtg cggcggttgc agtagggatt cagcaaggtt tgctggccga agaagtacgc
    12841 gtggaactcc ccggcggtcg tcttgatatc gcctggaaag gtccgggtca cccgttatat
    12901 atgactggcc cggcggtaca tgtctacgac ggatttattc atctatgaag caaccagggg
    12961 aagaactgca ggaaacactc acggagcttg atgaccgggc ggttgtcgat tatctgatta
    13021 aaaatcctga gttttttatc cgtaatgcgc gcgcagtaga agcgatacgt gtgccgcatc
    13081 cggtacgcgg caccgtttcg ttggtcgagt ggcacatggc ccgcgcacgt aatcatattc
    13141 atgttctgga agagaacatg gcgctgttga tggaacaggc tatcgccaac gaaggcctgt
    13201 tttatcgcct actctacctg cagcgcagtc tcaccgccgc cagcagtctc gacgatatgc
    13261 tgatgcgctt tcaccgctgg gcgcgcgatc tcggcctggc aggtgcgagt ctgcgcctgt
    13321 ttccggatcg ctggcgctta ggtgcgccgt cgaaccacac tcatctggca ttaagccgtc
    13381 agtctttcga accgctgcgt attcagcgtt tggggcagga acagcactat cttgggccgc
    13441 ttaacggacc tgagctgctg gtggtgctac ctgaagcgaa agcagtggga tcggtggcga
    13501 tgtcgatgct gggaagcgat gctgatttgg gtgttgtgct gtttaccagt cgcgatgcca
    13561 gtcactatca acaagggcaa ggaacgcagt tacttcatga aattgcgctg atgttgccgg
    13621 agcttctgga gcgttggatt gaacgcgtat gaccgattta cacaccgatg tagaacgcta
    13681 cctacgttat ctgagcgtgg agcgccagct tagcccgata accctgctta actaccagcg
    13741 tcagcttgag gcgatcatca attttgccag cgaaaacggc ctgcaaagct ggcagcaatg
    13801 tgatgtgacg gtggtgcgca attttgctgt acgcagtcgc cgtaaagggc tgggagcagc
    13861 aagtctggcg ttacggcttt ctgcgctacg tagctttttt gactggctgg tcagccagaa
    13921 cgaactcaaa gctaacccgg cgaaaggtgt ttcggcaccg aaagcgccgc gtcatctgcc
    13981 gaaaaacatc gacgtcgacg atatgaatcg gctgctggat attgatatca atgatcccct
    14041 cgctgtacgc gaccgtgcaa tgctggaagt gatgtacggc gcgggtctgc gtctttctga
    14101 gctggtgggg ctggatatta aacacctcga cctggagtct ggtgaagtgt gggttatggg
    14161 gaaaggcagc aaagagcgcc gcctgccgat tggtcgcaac gctgtggcgt ggattgagca
    14221 ctggcttgat ttgcgcgacc tgtttggtag cgaagacgac gcgctttttc tgtcgaaact
    14281 gggcaagcgt atctccgcgc gtaatgtgca gaaacgcttt gccgaatggg gcataaaaca
    14341 agggctgaat aatcacgttc acccacataa attacgtcac tcgttcgcta cgcatatgct
    14401 ggagtcgagc ggcgatcttc gtggtgtgca ggagctactg ggtcatgcca acctctccac
    14461 cacgcaaatc tatactcatc ttgattttca acaccttgcc tcggtgtacg atgcggcgca
    14521 tccacgcgcc aaacggggga aataatgcgt ttttaccggc ctttggggcg catctcggcg
    14581 ctcacctttg acctggatga taccctttac gataaccgtc cggtgatttt gcgcaccgag
    14641 cgagaggcgc ttacctttgt gcaaaattat catccggcgc tgcgcagctt ccagaatgaa
    14701 gatctgcaac gcctgcgcca ggcggtacgg gaagcggaac ccgagattta tcacgacgtg
    14761 acgcgttggc gttttcgttc gattgaacaa gcgatgctcg acgccgggct gagtgccgaa
    14821 gaagccagtg caggcgcaca cgcagcaatg atcaactttg ccaaatggcg cagccgaatc
    14881 gacgtcccgc agcaaactca cgacacctta aaacagctgg cgaagaaatg gccgctggtg
    14941 gcgatcacca acggtaacgc ccagccggaa ctgtttggtt tgggggatta ttttgagttt
    15001 gtgctgcgcg ctggcccgca cgggcgctca aaaccgttca gcgatatgta ctttctggct
    15061 gcggaaaaac tcaacgtgcc gatcggcgag atcttacatg ttggggacga tctcaccact
    15121 gacgtgggtg gggcaattcg cagcggaatg caggcctgtt ggatcagacc ggaaaatggc
    15181 gatctgatgc aaacctggga cagccgttta ctgccgcatc tggaaatttc ccggttggca
    15241 tctctgacct cgctgatata atcagcaaat ctgtatatat acccagcttt ttggcggagg
    15301 gcgttgcgct tctccgccca acctattttt acgcggcggt gccaatggac gtttcttacc
    15361 tgctcgacag ccttaatgac aaacagcgcg aagcggtggc cgcgccacgc agcaaccttc
    15421 tggtgctggc gggcgcgggc agtggtaaga cgcgcgtact ggtgcatcgt atcgcctggc
    15481 tgatgagcgt ggaaaactgc tcgccatact cgattatggc tgtgacgttt accaacaaag
    15541 cggcggcgga gatgcgtcat cgtatcgggc aactgatggg caccagccag ggcggcatgt
    15601 gggtcggcac cttccacggg ctggcgcacc gtctgctgcg tgcgcaccat atggacgcca
    15661 atctaccgca ggatttccag atcctcgaca gtgaagacca gctacgcctg cttaagcgtc
    15721 tgatcaaagc catgaacctc gacgagaagc agtggccgcc gcgccaggca atgtggtaca
    15781 tcaacagcca gaaagatgaa ggcctgcgtc cgcatcatat tcaaagctac ggtaatccgg
    15841 tggagcagac ctggcagaag gtgtatcagg cgtatcagga agcgtgtgac cgcgcgggcc
    15901 tggtggactt cgccgagctg ctgctgcgcg ctcacgaact gtggcttaac aagccgcata
    15961 tcctacaaca ctaccgcgaa cgttttacca atatcctggt ggacgaattc caggatacca
    16021 acaacattca gtacgcgtgg atccgcctgc tggcgggcga caccggcaaa gtgatgatcg
    16081 tcggtgatga cgaccagtca atctacggct ggcgcggggc gcaggtggag aatattcagc
    16141 gtttccttaa tgatttcccc ggtgccgaaa ctattcgtct ggagcaaaac taccgctcta
    16201 ccagcaatat tctgagcgcc gctaatgccc tgattgaaaa caataacggg cgtctgggta
    16261 aaaaactgtg gaccgatggc gcggacggtg agcctatttc cctctattgc gcttttaacg
    16321 aactcgatga agcgcgtttt gtggttaacc gcatcaaaac ctggcaggac aacggcgggg
    16381 cgcttgccga gtgcgccatt ctctaccgca gtaacgccca gtcgcgtgtg ctggaagaag
    16441 cactgttgca ggcgagtatg ccgtaccgta tttacggcgg gatgcgcttc ttcgaacgcc
    16501 aggaaatcaa agatgcgctc tcgtatctgc gcctgattgc caaccgtaac gacgacgcgg
    16561 cctttgagcg tgtggtgaat acgccaacgc ggggtattgg tgaccggacg ctggacgtgg
    16621 tacgtcagac atcgcgcgat cgccagttaa cactctggca ggcatgtcgt gaactgttgc
    16681 aggaaaaagc cctcgccgga cgtgctgcca gcgccttaca gcggtttatg gaactgatcg
    16741 acgccttagc gcaggaaact gccgatatgc cgctgcatgt acagactgac cgggtaatta
    16801 aagactccgg cctgcgtacc atgtacgagc aggagaaggg cgaaaaaggt cagacgcgta
    16861 tcgaaaactt agaggaactg gtgacggcaa cgcgccagtt cagctacaac gaagaagacg
    16921 aagatttaat gccgctgcag gcgttcctat cccatgcggc gctggaagca ggcgaagggc
    16981 aggcggatac ctggcaggat gcggtacaac tgatgaccat gcactcggcg aaaggtctgg
    17041 agttcccgca ggtgtttatc gtcggtatgg aagagggcat gttcccaagc cagatgtcgc
    17101 tggatgaagg cgggcgtctg gaagaagaac gccgtctggc ctacgttggc gtaacccgcg
    17161 cgatgcagaa actgacgctg acctacgcgg aaactcgccg tctgtatggc aaagaggttt
    17221 accatcgccc gtcgcgcttt attggcgagc tgccggaaga gtgtgtggaa gaggtgcgcc
    17281 tgcgcgccac ggtaagccgc ccggtcagcc atcagcggat gggtacgccg atggtcgaga
    17341 acgacagcgg ctacaagctc ggccagcgcg tacgccacgc taagtttggt gaaggcacca
    17401 ttgtcaatat ggaaggcagc ggtgagcata gccgtttgca ggtggcattt cagggccagg
    17461 gtattaaatg gctggtggcg gcttatgccc ggctggagtc ggtgtaacgt tgccggatgc
    17521 ggtgctgcgc accttatttg gcctaaaaaa tcattcagat tcaataaatt gcaacgtcat
    17581 gtaggccgga tagggcgttt acgccgcatc cggcatctgc gccatcttca gtatctgaca
    17641 caaaactatc gttttaacct ttccgctcta cggaaatcat ggtgacaaaa ggatagcgtt
    17701 gccacgggat tgccccgcct ttcatataca tatgtgaaat cgtgccatca agataaagca
    17761 gctgctcaac gttcagtttc gctttggcat aacaggcaaa atcataaaaa tttgtcgcct
    17821 gctggctcaa caaaaacacg gcattcccat gtttattaat cccaacaccg ttacgaattt
    17881 tacgtgaggc gacgttggga tgaatacgcg gattaattac actgttttcc atcaacattg
    17941 gccctgactg caccgcaaac tgaatctctt tactggtttt gaaggcatcc agacgaacga
    18001 tgccgacttt atctcccgcg acataaaaca cgccgccagg acggataaag aaattccctt
    18061 cacctgaagc gagatttaac gccaccttct gctgaccgtt ttcgatgtac aaaccgagcg
    18121 gcgcatagct ttcatcatag atgccgccgt tcatcgccat ctgcacctga ccctgactat
    18181 tcatatccgc cagcagagca tgtaaagttc cccacgcttc gccattggct ttttgccagt
    18241 acattttcac ccgctctgtt tgaggattaa cggtatacgc ctgtacggtc agcgtcggat
    18301 ctgagagtgc gcaatcatca gcggcaacag caaacaaggg aagtaaggtg agggtgagaa
    18361 aaatccgttt gagattcaag gtgatcattc ctttaccaat gagtagccga tgcgccatta
    18421 taggtcctgg atgttggatt tttttatcct gttagcgacc ttgacgagta ccaaaaagcg
    18481 cgaagttcaa ctattgttct gtggtgttct gttgcgtgtt gacggcaaaa ttttgctggc
    18541 gtaacatgcg cgcacgatca ctctaagagg acattcgcct tggacacacc cagtagatac
    18601 tggctcacta tcctgtcatc caggatcaac tcctaaggct atcccttttt gctgatagcc
    18661 ttagcggttg tcagcgacct caatttttcc cgtcgcgctg agtcaggctg tttaatggtc
    18721 tgaaacccaa tttgtttctg tgtgcccacc gaactgtccg atattttaag cattgggagt
    18781 cccggtcatg ctgagcgcat ttcaactgga aaataaccga ctgacccggc tggaagtcga
    18841 agagtcacaa ccccttgtaa atgcagtatg gattgatctt gtcgaaccgg acgacgacga
    18901 gcgactgcgc gtacaatctg aacttggcca gagcctggca acccgcccgg aactggaaga
    18961 catcgaagca tcggcacgtt tctttgaaga cgacgacggc ctgcatattc actccttctt
    19021 cttctttgaa gatgcggaag atcacgccgg taactccact gtggcattta ccatccgtga
    19081 tggtcgtctg tttactctgc gtgagcgtga actgcccgct tttcgtctgt atcgtatgcg
    19141 tgcccgtagc cagtcgatgg tagacggtaa cgcctacgag ttgctgctgg atctattcga
    19201 aaccaaaatc gaacagttgg cagatgaaat tgaaaatatc tatagcgacc tggagcagtt
    19261 gagccgggtg attatggaag ggcatcaggg cgatgagtac gacgaggcgc tctccacgct
    19321 ggcggaactg gaagatatcg gctggaaagt tcgcctgtgt ctgatggata cccagcgcgc
    19381 gctcaacttc ctggtgcgta aagcgcgttt accgggtggg caactggagc aggcgcgtga
    19441 aatcctgcga gatatcgaat ccctgctgcc gcataacgaa tccctgttcc agaaggtgaa
    19501 cttcctgatg caggcggcaa tgggttttat caacatcgag cagaaccgca tcatcaaaat
    19561 cttctcggtg gtatccgtgg tattcctgcc gccgacgctc gttgcttcca gctatgggat
    19621 gaactttgag tttatgccag aactgaagtg gagtttcggc tacccaggcg cgattatctt
    19681 tatgatcctc gcgggcctgg caccgtatct gtactttaag cgcaagaact ggctgtaata
    19741 tgagtgccgg ataaagctat ttttttatcc ggcttatttc taaaaattgt cttatttaaa
    19801 gtcatgcgga ttgaaaactc gctctatttt attttcttgt gttaattgat actcagtaaa
    19861 atcgttaata ccaatatgag tgttacgata agggtattca ttaataacca ttaagtaatt
    19921 tttcacgatg caattatcat tgctcttaat tgtcgggaaa cagtagagat cttcatacgg
    19981 cccttcgata tattttttat agtcagtgaa gccattaccg atatcaatga cataccaggt
    20041 atgccaacta ccttctggta ggggatgttg atttttaatt tcattctgat gcttcagata
    20101 ccaatttatt ttatcgctgt cagtccatgg cagatgatca acgaccagaa agactgaatt
    20161 gccagcatca gagtatgtat acaaaatctg tacaggacgc aatgtccata a
//
LOCUS       DAPGWB010000078        20153 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.078, whole genome shotgun sequence.
ACCESSION   DAPGWB010000078 DAPGWB010000000
VERSION     DAPGWB010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20153
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.078"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            56..1033
                     /locus_tag="RHX79_002708"
     CDS             56..1033
                     /locus_tag="RHX79_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HDV2197861.1"
                     /translation="MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSP
                     DDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASN
                     ALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK
                     QAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGE
                     GVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDA
                     TAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEDLL"
     gene            complement(1103..1585)
                     /locus_tag="RHX79_002709"
     CDS             complement(1103..1585)
                     /locus_tag="RHX79_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon-containing protein"
                     /protein_id="HDV2197862.1"
                     /translation="MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELT
                     RTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWR
                     EVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP
                     "
     gene            1820..4402
                     /gene="leuS"
                     /locus_tag="RHX79_002710"
     CDS             1820..4402
                     /gene="leuS"
                     /locus_tag="RHX79_002710"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008456064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDV2197863.1"
                     /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP
                     SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY
                     DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP
                     NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKT
                     MQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNP
                     ELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGA
                     VMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDH
                     EAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQL
                     PVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPEY
                     KEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQ
                     GMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK
                     NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTA
                     KGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP
                     TDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVED
                     STLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN
                     LVVG"
     gene            4417..4998
                     /gene="lptE"
                     /locus_tag="RHX79_002711"
     CDS             4417..4998
                     /gene="lptE"
                     /locus_tag="RHX79_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HDV2197864.1"
                     /translation="MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPN
                     GPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIM
                     TVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
                     SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN"
     gene            4998..6029
                     /gene="holA"
                     /locus_tag="RHX79_002712"
     CDS             4998..6029
                     /gene="holA"
                     /locus_tag="RHX79_002712"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDV2197865.1"
                     /translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAA
                     QGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTG
                     LLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNL
                     ELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV
                     DALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH
                     RVWQNRRGMMGEALNRLSQPQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHK
                     PLADVFIDG"
     gene            6031..6672
                     /gene="nadD"
                     /locus_tag="RHX79_002713"
     CDS             6031..6672
                     /gene="nadD"
                     /locus_tag="RHX79_002713"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HDV2197866.1"
                     /translation="MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP
                     HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPL
                     AFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPED
                     LHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR"
     gene            6696..7307
                     /locus_tag="RHX79_002714"
     CDS             6696..7307
                     /locus_tag="RHX79_002714"
                     /EC_number="3.1.3.73"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin/alpha-ribazole phosphatase"
                     /protein_id="HDV2197867.1"
                     /translation="MRLWLIRHGETQANIDGLYSGHAPTPLTARGIEQAQNLHTLLHG
                     VSFDLVLCSELERAQHTARLVLSDRQLPVQIIPELNEMFFGDWEMRHHRDLMQEDAEN
                     YSAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSEFQHYQNILIVSHQGVLSLLIARL
                     IGMPAEAMWHFRVDQGCWSAIDINQKFATLRVLNSRTIGVENA"
     gene            7567..7884
                     /gene="rsfS"
                     /locus_tag="RHX79_002715"
                     /gene_synonym="rsfA"
     CDS             7567..7884
                     /gene="rsfS"
                     /locus_tag="RHX79_002715"
                     /gene_synonym="rsfA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007373852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDV2197868.1"
                     /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS
                     SRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEK
                     LWS"
     gene            7888..8355
                     /gene="rlmH"
                     /locus_tag="RHX79_002716"
     CDS             7888..8355
                     /gene="rlmH"
                     /locus_tag="RHX79_002716"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDV2197869.1"
                     /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG
                     KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLI
                     GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE"
     gene            8386..10287
                     /gene="mrdA"
                     /locus_tag="RHX79_002717"
     CDS             8386..10287
                     /gene="mrdA"
                     /locus_tag="RHX79_002717"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-transpeptidase MrdA"
                     /protein_id="HDV2197870.1"
                     /translation="MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI
                     VRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL
                     DALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG
                     YKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVL
                     HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVT
                     DPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP
                     YVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFF
                     YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP
                     VGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIH
                     SGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE
                     RLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAEN
                     PAVAAAEDH"
     gene            10290..11402
                     /gene="mrdB"
                     /locus_tag="RHX79_002718"
                     /gene_synonym="rodA"
     CDS             10290..11402
                     /gene="mrdB"
                     /locus_tag="RHX79_002718"
                     /gene_synonym="rodA"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004885876.1"
                     /note="rod shape-determining protein RodA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase MrdB"
                     /protein_id="HDV2197871.1"
                     /translation="MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIG
                     MMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW
                     LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDL
                     GTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPE
                     SDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG
                     ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV
                     PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV"
     gene            11413..12501
                     /gene="rlpA"
                     /locus_tag="RHX79_002719"
     CDS             11413..12501
                     /gene="rlpA"
                     /locus_tag="RHX79_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic peptidoglycan transglycosylase RlpA"
                     /protein_id="HDV2197872.1"
                     /translation="MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEIS
                     GADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFD
                     PTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSN
                     NTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGASSVSGPQGDILP
                     VSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLESSEPTPAPQPVVTAPSTTPATSPA
                     MVTPQAASQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGP
                     FASKAEASTLQQRLQTEAQLQSFITTAQ"
     gene            12641..13852
                     /gene="dacA"
                     /locus_tag="RHX79_002720"
     CDS             12641..13852
                     /gene="dacA"
                     /locus_tag="RHX79_002720"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase DacA"
                     /protein_id="HDV2197873.1"
                     /translation="MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQI
                     DAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN
                     DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG
                     LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFT
                     FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG
                     REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRM
                     KDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID
                     YIKLMFHHWFG"
     gene            13963..14226
                     /locus_tag="RHX79_002721"
     CDS             13963..14226
                     /locus_tag="RHX79_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HDV2197874.1"
                     /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYT
                     PTVKPSSKGNYHSVSITINATHIEQVETLYEELGKIDIVRMVL"
     gene            14327..14968
                     /gene="lipB"
                     /locus_tag="RHX79_002722"
     CDS             14327..14968
                     /gene="lipB"
                     /locus_tag="RHX79_002722"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415163.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HDV2197875.1"
                     /translation="MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHY
                     PVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELV
                     TLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDL
                     SPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA"
     gene            15227..16180
                     /locus_tag="RHX79_002723"
     CDS             15227..16180
                     /locus_tag="RHX79_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HDV2197876.1"
                     /translation="MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHK
                     GIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES
                     ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQL
                     SQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL
                     PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP
                     LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF"
     gene            16389..17354
                     /gene="lipA"
                     /locus_tag="RHX79_002724"
     CDS             16389..17354
                     /gene="lipA"
                     /locus_tag="RHX79_002724"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HDV2197877.1"
                     /translation="MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIK
                     LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD
                     VAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKS
                     PQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL
                     ERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ
                     RYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK"
     gene            complement(17455..17658)
                     /gene="tatE"
                     /locus_tag="RHX79_002725"
     CDS             complement(17455..17658)
                     /gene="tatE"
                     /locus_tag="RHX79_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatE"
                     /protein_id="HDV2197878.1"
                     /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMN
                     DDDAAAKKGADVDLQAEKLSHKE"
     gene            complement(17787..18575)
                     /locus_tag="RHX79_002726"
     CDS             complement(17787..18575)
                     /locus_tag="RHX79_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deaminated glutathione amidase"
                     /protein_id="HDV2197879.1"
                     /translation="MLVAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLA
                     RDDHDADLSVKSAQLLEGEFLGRLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAG
                     NIVARYAKLHLYDAFAIQESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQA
                     LQGAEILVLPAAWVRGPLKEHHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPF
                     GVTIAAASEMPALIMAEVTPERVRQVRAQLPVLNNRRFAPPQLL"
     gene            18668..19051
                     /gene="crcB"
                     /locus_tag="RHX79_002727"
     CDS             18668..19051
                     /gene="crcB"
                     /locus_tag="RHX79_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDV2197880.1"
                     /translation="MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIG
                     AFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN
                     VFVNLLGSFAMTALAFWLFSASTAH"
     gene            complement(19106..19315)
                     /gene="cspE"
                     /locus_tag="RHX79_002728"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             complement(19106..19315)
                     /gene="cspE"
                     /locus_tag="RHX79_002728"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HDV2197881.1"
                     /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL
                     AEGQRVEFEITNGAKGPSAANVIAL"
     gene            complement(19490..20050)
                     /gene="pagP"
                     /locus_tag="RHX79_002729"
     CDS             complement(19490..20050)
                     /gene="pagP"
                     /locus_tag="RHX79_002729"
                     /EC_number="2.3.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) palmitoyltransferase PagP"
                     /protein_id="HDV2197882.1"
                     /translation="MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQ
                     PEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDS
                     WNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGP
                     VTFQMTYIPGTYNNGNVYFAWMRFQF"
BASE COUNT         5093 a         5094 c         5064 g         4902 t
ORIGIN      
        1 aaatggaaca cataaaaata taatatgttt tatctgcaac cataaggaaa tgataatgat
       61 tttcacgtca agttgctgcg ataatttatc aatagatgag attatcgaac gtgctgaaaa
      121 aggcgattgc gaggctcaat atattgttgg gttttattat aatcgcgata gcgcaattga
      181 ttctccggac gacgaaaaag ccttttactg gctgaagctg gccgccgagc aaggtcattg
      241 tgaagcacaa tattccttag gacaaaagta tactgaggat aaaagccgtc ataaagataa
      301 tgagcatgcc atcttttggc tgaaaaaagc tgccctacaa ggccatactt tcgcttccaa
      361 cgcccttggc tggatactgg atcgtggaga agaccccaat tataaagaag cggttgtctg
      421 gtatcagata gccgcggaga gcggaatgtc ttatgcgcaa aataatcttg ggtggatgta
      481 cagaaatggc aacggagtcg caaaagacta tgcgctggca tttttctggt acaaacaagc
      541 tgcattacaa ggccatagtg acgcgcaaaa caatctggcc gatctttatg aagacggaaa
      601 aggcgttgct caaaacgaga cactcgccgc attctggtat ttgaaaagcg cacagcaggg
      661 taatcggcat gctcagtttc aaattgcatg ggattataac gctggcgaag gggtggacca
      721 ggactataag caagcgatgt actggtatct gaaggctgcc gctcagggga gcgtcggcgc
      781 ttacgtcaac atcggttata tgtataaaca cggacaaggc gttgagaaag attatcaggc
      841 tgcctttgaa tggtttacga aagccgctga atgcaatgac gccactgcct ggtataacct
      901 ggccattatg tatcactacg gagaaggaag acctgtcgat ctccgacagg ctctcgacct
      961 gtatcgtaaa gttcagtcat ccggaaccag agatgtcagt caggaaattc gtgagactga
     1021 agatttactg tagagataaa aacaagggcc ggggaatttc attcggccca tattctcttt
     1081 attgctgtgc gaaatcagac tattacggct caaacgggcg tctctggaac tggtcatgac
     1141 cacatttcgg gcatagcgtc agcacttccg gtgtgtagat cgggagatgg aagtgacatt
     1201 tctcgcagac cagatttccc agcccgacca cttctccgct gtgataaacc ccatgatgat
     1261 tgaggtcctg gaaaacttcg cgccattcaa gctgcgtttt atcggtgata tctgccagct
     1321 cctgccataa gctttcttta atcacccgca taaagacgct gtcagattct tctttcaggc
     1381 tctcttcata gctcatggcg aactcttcca ggtcacgtct tacagctcgc gtcagctcat
     1441 cgacctcggt tcgcgttaac tcccctgttt ttattacgcg ctcgcgcgcc tgttccacca
     1501 gtgcgtcgat atcacgttcg ccattgcgca ggcgttcgct cagtgacgcg accagttcac
     1561 ggtaatattg agcaaccttg ttcatcgttt catctcccgg gtcgttaact gactataata
     1621 atagacgttc tttgttcctt gctttgctaa tacgcccaca aactctgtaa attaatgtat
     1681 gaataatccg ggcatcattt caacgtcgag tgcgcgaaag gctgttttga cgcggacgtt
     1741 tgggctatgc tatgcggatc tgaaaaacca cctcaacgct acatttgtag ccgtattgaa
     1801 aacaggacca ctggctgcca tgcaagagca ataccgcccg gaagagatag aatccaaagt
     1861 acagcttcat tgggatgaga agcgcacatt tgaagtaacc gaagacgaga gcaaagagaa
     1921 gtattactgc ctgtctatgc ttccctatcc ttctggtcga ctacacatgg gccacgtacg
     1981 taactacacc atcggtgacg tgatcgcccg ctaccagcgt atgctgggca aaaacgtcct
     2041 gcagccgatc ggctgggacg cgtttggtct gcctgcggaa ggcgcggcgg tgaaaaacaa
     2101 caccgctccg gcaccgtgga cgtacgacaa catcgcgtat atgaaaaacc agctcaaaat
     2161 gctgggcttt ggttatgact ggagccgcga gctggcaacc tgtacgccgg aatactaccg
     2221 ttgggaacag aaattcttca ccgagctgta taaaaaaggc ctggtatata agaagacttc
     2281 tgcggtcaac tggtgcccga acgaccagac cgtactggcg aacgaacaag ttatcgacgg
     2341 ctgctgctgg cgctgcgata ccaaagttga acgtaaagag atcccgcagt ggtttatcaa
     2401 aatcactgct tacgctgacg agctgctcaa cgatctggat aaactggatc actggccaga
     2461 caccgttaaa accatgcagc gtaactggat cggtcgttcc gaaggcgtgg agatcacctt
     2521 caacgttaac gactatgaca acacgctgac cgtttacact acccgcccgg acacctttat
     2581 gggttgtacc tacctggcgg tagctgcggg tcatccgctg gcgcagaaag cggcggaaaa
     2641 taatcctgaa ctggcggcct ttattgacga atgccgtaac accaaagttg ccgaagctga
     2701 aatggcgacg atggagaaaa aaggcgtcga tactggcttt aaagctgttc acccattaac
     2761 gggcgaagaa attcccgttt gggcagcaaa cttcgtattg atggagtacg gcacgggcgc
     2821 agttatggcg gttccgggtc acgaccagcg cgactacgag tttgcctcta aatacggcct
     2881 gaacatcaaa ccagttatcc tggctgctga cggctctgag ccagatcttt ctcagcaagc
     2941 cctgactgaa aaaggcgtgc tgttcaactc tggcgaattc aacggtcttg accatgaagc
     3001 ggccttcaac gccatcgccg ataaactgac tgcgatgggc gttggcgagc gtaaagtgaa
     3061 ctaccgcctg cgcgactggg gtgtttctcg tcagcgttac tggggcgcgc cgattccgat
     3121 ggtgacgctg gaagacggta ccgtaatgcc gaccccggac gaccagctgc cggtgatcct
     3181 gccggaagat gtggtgatgg acggcattac cagcccgatt aaagcagatc cggagtgggc
     3241 aaaaactacc gttaacggta tgccagcgct gcgtgaaacc gacactttcg acacctttat
     3301 ggagtcctcc tggtactatg cgcgctacac ttgcccagag tacaaagaag gtatgctgga
     3361 ttccgaagcg gctaactact ggctgccggt ggatatctac attggtggta tcgaacacgc
     3421 cattatgcac ctgctctact tccgcttctt ccacaaactg atgcgtgatg caggcatggt
     3481 gaactctgac gaaccagcga aacagttgct gtgtcagggt atggtgctgg cagatgcctt
     3541 ctactatgtt ggcgaaaacg gcgaacgtaa ctgggtttcc ccggttgatg ctatcgttga
     3601 acgtgacgag aaaggccgta tcgtgaaagc gaaagatgcg gcaggccatg aactggttta
     3661 taccggcatg agcaaaatgt ccaagtcgaa gaacaacggt atcgacccgc aggtgatggt
     3721 tgaacgttac ggcgcggaca ccgttcgtct gtttatgatg tttgcttctc cggctgatat
     3781 gactctcgaa tggcaggaat ccggtgtgga aggggctaac cgcttcctga aacgtgtctg
     3841 gaaactggtt tacgagcaca cagcaaaagg tgatgttgcg gcactgaacg ttgatgcgct
     3901 gactgaagat cagaaagcgc tgcgtcgcga tgtgcataaa acgatcgcta aagtgaccga
     3961 tgatatcggc cgtcgtcaga ccttcaacac cgcaattgcg gcgattatgg agctgatgaa
     4021 caaactggcg aaagcaccaa ccgatggcga gcaggatcgc gctctgatgc aggaagcgct
     4081 gctggccgtt gtccgtatgc ttaacccgtt caccccgcac atctgcttca cgctgtggca
     4141 ggaactgaaa ggcgaaggcg atatcgacaa cgcgccgtgg ccggttgctg acgaaaaagc
     4201 gatggtggaa gactccacgc tggtcgtggt gcaggttaac ggtaaagtcc gtgccaaaat
     4261 caccgttccg gtggacgcaa cggaagaaca ggttcgcgaa cgtgctggcc aggaacatct
     4321 ggtagcaaaa tatcttgatg gcgttaccgt gcgtaaagtg atttacgtac caggtaaact
     4381 cctcaatctg gtcgttggct aagcgcggga ggaagcgtgc gatatctggc aacattgttg
     4441 ttatctctgg cggtgttaat caccgccggg tgtggctggc atctgcgtga taccacgcag
     4501 gttccttcca ctatgaaggt catgatcctg gactcaggcg atccgaacgg gccattaagc
     4561 cgtgcggtgc gtaaccagtt acgtctgaat ggtgtcgagt tgcttgataa agaaaccacg
     4621 cgtaaggacg ttccatccct gcgtttgggt aaagtgagca tcgcgaaaga taccgcatcg
     4681 gtattccgta acggtcaaac agcagagtat cagatgatca tgacggtgaa tgcgaccgtg
     4741 ttgatccccg gccgtgatat ctacccgatt agcgccaaag tcttccgttc gttctttgat
     4801 aacccgcaaa tggcgttagc gaaagataac gaacaagaca tgatcgtaaa agagatgtac
     4861 gaccgtgctg ccgaacagct gattcgtaag ctgccaagca tccgtgctgc ggatattcgt
     4921 tccgacgaag aacagacgtc gaccacaacg gatactccgg caacgcctgc acgcgtctcc
     4981 accacgctgg gtaactgatg attcggttgt acccggaaca actccgcgcg cagctcaatg
     5041 aagggctgcg cgcggcgtat cttttacttg gtaacgatcc tctgttattg caggaaagcc
     5101 aggacgctgt tcgtcaggta gctgcggcac aaggattcga agaacaccac actttttcca
     5161 ttgatcccaa cactgactgg aatgcgatct tttcgttatg ccaggctatg agtctgtttg
     5221 ccagtcgaca aacgctattg ctgttgttac cagaaaacgg accgaatgcg gcgatcaatg
     5281 aacaacttct cacactcacc ggacttctgc atgacgacct gctgttgatc gtccgcggta
     5341 ataaattaag caaagcgcaa gaaaatgccg cctggtttac tgcgcttgcg aatcgcagcg
     5401 tgcaggtgac ctgtcagaca ccggagcagg ctcagcttcc ccgctgggtt gctgcgcgcg
     5461 caaaacagct caacttagaa ctggatgacg ctgcaaatca ggtgctctgc tactgttatg
     5521 aaggtaacct gctggcgctg gctcaggcac tggagcgttt atcgctgctc tggccagacg
     5581 gcaaattgac attaccgcgc gttgaacagg cggtgaatga tgccgcgcat ttcacccctt
     5641 ttcattgggt tgatgctttg ttgatgggaa aaagtaagcg cgcgttgcat attcttcagc
     5701 aactgcgtct ggaaggcagc gagccggtta ttttgttgcg cacattacaa cgtgaactgt
     5761 tgttactggt taacctgaaa cgccagtctg cccatacgcc actgcgtgcg ttgtttgata
     5821 agcatcgggt atggcagaac cgccggggca tgatgggcga ggcgttaaat cgcttaagtc
     5881 agccgcagtt acgtcaggcc gtgcaactcc tgacacgaac ggaactcacc ctcaaacaag
     5941 attacggtca gtcagtgtgg gcagagctgg aagggttatc tcttctgttg tgccataaac
     6001 ccctggcgga cgtatttatc gacggttgat atgaaatctt tacaggctct gtttggcggc
     6061 acctttgatc cggtgcacta tggtcatctt aaacccgtgg aaacgctggc gaatttgatt
     6121 ggtctgacgc gggtcacaat catccctaat aatgttcctc cgcatcgtcc ccagccggaa
     6181 gcgaacagcg tgcagcgtaa acacatgctt gaattggcga ttgccgacaa gccattattt
     6241 actcttgatg aacgcgagct aaagcgcaat gccccctctt acactgcgca aacactgaaa
     6301 gagtggcggc aggaacaagg accggacgtg ccgctggcgt ttattattgg tcaggattca
     6361 ctgctgacct ttccgacctg gtacgaatac gaaacgatac tcgacaatgc acatttgatc
     6421 gtctgtcggc gtccaggtta cccacttgaa atggcgcaac cgcaatacca gcaatggctg
     6481 gaagatcatt tgacacataa cccggaagat cttcaccttc agcctgccgg taaaatttat
     6541 ctggctgaaa cgccgtggtt taacatctcg gcgaccatca tccgcgaacg tttgcaaaac
     6601 ggtgaatcgt gtgaggattt attgccggaa ccggtactga cttacattaa ccaacaaggc
     6661 ttgtatcgct gatacctgtc gttacggagg gcatgatgcg actgtggtta attcgtcatg
     6721 gtgaaacgca agcgaatatc gatggtcttt acagcggtca tgcgcccacc cccctgaccg
     6781 cgcgcggtat tgagcaagcg caaaatctgc atacgctgct acatggtgtt tcctttgatc
     6841 tggttttatg cagtgaactg gaacgggcac agcataccgc gcgactggtt ctcagtgacc
     6901 gccagctccc cgtgcaaatc atccctgaac tcaacgaaat gttttttggc gactgggaga
     6961 tgcgacatca tcgcgacctc atgcaagaag atgccgaaaa ctatagcgcg tggtgcaatg
     7021 actggcagca tgcaatcccc acgaacggtg aaggatttca ggcattttcg caacgtgtgg
     7081 aacgctttat cgcaaggctt agtgaatttc agcactatca gaatatttta atcgtcagcc
     7141 atcagggtgt actgagtctg ttaatcgccc gtttaattgg catgcctgcc gaggctatgt
     7201 ggcattttcg cgttgaccag gggtgttgga gcgccattga tatcaaccaa aaattcgcga
     7261 cgctacgcgt cctcaatagc cgtaccatcg gggtcgagaa tgcatgactt ttctgttttt
     7321 ttacgggtaa gccgcaacga ccattgacag acccgggcag gctgatattc tccgcagcca
     7381 gactttttcc gccagacacg actttgtaga aattgtttta caaaaatggc gatgcaatct
     7441 gcggcgcggg gtgggatgat agcccacttt cgaaagccga ttcggcgaca attgtcccga
     7501 aatcgcctct ggttcaggta tactgacaga ccatttttat ctatttgatt cacccagggg
     7561 gaaaacttgc agggtaaagc actccaggat tttgttatcg acaaaattga tgacctcaaa
     7621 ggtcaggaca tcatcgcctt agacgttcag ggcaaatcca gcatcaccga ctgcatgatc
     7681 atctgtacgg gtacgtccag ccgtcatgtt atgtccattg ctgaccacgt tgtgcaggag
     7741 tctcgcgcag cgggcctgtt accgctcggc gtagaaggtg aaaacagcgc cgactggatt
     7801 gtcgtggatt tgggcgatgt gattgtccat gtcatgcagg aagagagccg tcgcctgtat
     7861 gaactggaaa aactctggag ttaatgcgtg aagctgcaac ttgtcgccgt gggaacgaaa
     7921 atgccggact gggtacaaac cggttttacc gagtacctgc gtcgttttcc gaaagatatg
     7981 cccttcgagc tgattgaaat tccggccgga aaacgcggca agaatgcgga catcaagcgc
     8041 atactcgaca aagagggtga gcagatgttg gcggccgcag gcaaaaaccg cattgtcacc
     8101 ctcgatattc caggcaagcc ctgggatacg ccgcagttag ccgctgagct ggaacgctgg
     8161 aagctggatg gtcgcgacgt cagtctactg attggcgggc ctgaagggtt gtcgcctgcc
     8221 tgtaaagcgg cggcggagca gagctggtcg ctgtcggcgc ttaccctccc ccatccgctg
     8281 gttcgcgtgc tggtcgcaga gagtctgtac cgggcgtgga gcatcaccac caaccatcct
     8341 tatcaccgtg agtgataagg gagctttgag tagaaaacgc agcggatgaa actacagaac
     8401 tcttttcgcg actatacggc agagtccgcg ctgtttgtgc gccgggcgct ggtcgccttt
     8461 ttggggattt tgctgctgac cggcgtgctt atcgccaacc tgtataatct gcaaattgtt
     8521 cgctttaccg attaccagac ccgctctaat gaaaaccgca ttaagctggt gcctatcgcg
     8581 cccagccgcg gcattatcta cgaccgtaac ggtatccctc tggcactcaa ccgcactatc
     8641 taccagatag aaatgatgcc ggagaaagtc gataacgtgc agcaaacgct ggacgctttg
     8701 cgcagcgtgg ttgatctgac cgatgacgat attgctgcat tccgaaaaga gcgcgcacgt
     8761 tcacaccgtt tcacctctat tcccgtgaaa actaacctga ccgaagtaca agtagctcgc
     8821 tttgccgtca atcagtaccg ttttccgggt gtcgaagtta aaggctataa acgtcgttac
     8881 tatccttacg gttcggcgtt gacccacgtc atcggctatg tgtcgaaaat caacgataaa
     8941 gacgtcgaac gcctgaataa tgacggcaaa ctggccaact atgcggcaac gcatgatatc
     9001 ggtaagctgg gcattgagcg ttactatgaa gacgtgctgc acggtcagac cggttatgaa
     9061 gaggttgaag ttaacaaccg tgggcgtgtt atccgccagt taaaagaagt accaccgcaa
     9121 gccggacacg atatttacct gacgctggat ctcaaactcc agcaatatat tgaaacgctg
     9181 ctggcgggta gccgcgcagc tgtggtagtc accgatccgc gtacaggtgg ggtgctggca
     9241 ctggtttcca cgcctagtta tgacccaaac ctgtttgttg acggtatctc cagcaaagat
     9301 tattccgcct tgctgaacga cccgaataca ccgctggtga accgcgccac acagggggtt
     9361 tatcctcctg cgtctacagt taaaccctat gtggcggttt cggcattaag cgccggggtg
     9421 atcacgcgca atacgacgct gtttgaccca ggctggtggc aactaccagg gtcggaaaaa
     9481 cgttatcgtg actggaaaaa atggggccac gggcgtctga atgtcacaag atcgctggaa
     9541 gaatctgcgg ataccttctt ctatcaggtg gcctacgata tggggatcga tcgcctctcc
     9601 gaatggatgg gtaaattcgg ttatggtcat tacaccggta tcgacctggc ggaagaacgt
     9661 tccggcaaca tgcctacccg cgaatggaaa cagaaacgct ttaaaaaacc gtggtatcag
     9721 ggtgacacca ttccggttgg tatcggccag ggttactgga cagcgacccc aatccagatg
     9781 agtaaggcac tgatgatcct gattaatgac ggtatcgtga aggttccgca tttgctgatg
     9841 agcaccgccg aagacggcaa acaggtgcca tgggtacaac cgcatgaacc gcccgtcggc
     9901 gatattcatt ccggttactg ggagctggcg aaagacggta tgtacggtgt tgctaaccgc
     9961 cctaacggta cggcgcataa atactttgcc agcgcaccgt acaaaattgc ggcgaaatct
    10021 ggtaccgctc aggtcttcgg tctgaaagcg aacgaaacct ataatgcgca caaaattgcc
    10081 gagcgtttac gtgaccacaa actgatgacc gcctttgcgc catacaacaa tccgcaagtg
    10141 gctgtcgcca tgattctgga gaacggcggc gcgggtccgg cggttggtac gctgatgcgc
    10201 cagatcctcg accacattat gctgggtgat aacaataccg atctgcctgc ggaaaatcct
    10261 gcggttgccg cagcggagga ccattaatca tgacggataa tccgaataaa aaaacattct
    10321 gggataaagt ccatctcgat cccacaatgc tgctgatctt actggcattg ctggtttaca
    10381 gcgccctggt tatctggagc gccagcggtc aggatattgg catgatggag cgtaaaatag
    10441 gccaaatcgc gatgggtctg gtcatcatgg tggtgatggc gcaaattcct ccacgcgttt
    10501 atgaaggctg ggccccctat ctctatatca tctgtattat tttgctggtg gcggtagatg
    10561 ctttcggtgc catctctaaa ggcgctcaac gctggctgga cctcggtatt gttcgttttc
    10621 agccgtcgga aattgccaaa atagccgtac cactgatggt tgcgcgcttt atcaaccgcg
    10681 acgtttgccc gccatcgttg aagaacactg gcatcgcgct ggtgctgata tttatgccca
    10741 cgctgctggt ggctgcacag cctgacctgg gaacatcaat cctcgttgcg ctttccggtc
    10801 tgtttgtact gttcctctct ggccttagct ggcgtctgat tggcgtcgca gtagtgctgg
    10861 tggcggcgtt cattcctatt ctgtggttct tcctgatgca tgattaccag cgccagcgcg
    10921 taatgatgct cctggacccg gaatcagacc cactcggcgc gggctatcac attattcagt
    10981 ctaaaattgc tattggctcc ggcggattac gcggcaaagg ctggctgcat ggcactcagt
    11041 cacaacttga atttctaccc gaacgccata ccgactttat cttcgcggta ctggcggaag
    11101 agctgggatt agtgggcatt ctgattctgc tcgctctcta cattctgctg atcatgcgcg
    11161 ggctgtggat agccgccaga gcgcaaacca cctttggtcg cgtcatggct ggcggcttaa
    11221 tgctgatatt attcgtttat gtcttcgtaa atattggtat ggtaagcggt attctgccgg
    11281 ttgtaggggt tccgctccca ctggtcagtt atggaggatc agcgctaatt gtgctgatgg
    11341 ctgggttcgg gattgtaatg tcaatccaca cccacaggaa aatgttgtcg aaaagcgtgt
    11401 aagaggtgcg caatgcgtaa gcagtggctc gggatctgca tcgcggcagg aatgctcgcg
    11461 gcatgtacaa gcgatgatgg tcagcaacag acggtaagtg taccgcagcc tgcggtatgt
    11521 aacggcccca tagttgaaat tagcggggcg gacccgcgtt tcgaaccact gaacgcgacg
    11581 gcaaatcagg attaccagcg cgacggtaaa agctacaaaa tcgtgcagga tccgtctcga
    11641 tttagccagg cgggactggc ggcaatctat gatgccgaac caggcagtaa cctgacggcc
    11701 tctggcgaag ctttcgatcc gacacagttg acggcggccc atccaacgct tccgatcccc
    11761 agctacgcca gaatcactaa cctggctaac gggcgaatga tcgtggtgcg cattaatgat
    11821 cgcggcccct acggcaacga ccgcgtaatt tcgctttctc gcgcagcagc tgaccgtctt
    11881 aacacgtcaa acaacaccaa agttcgtatc gatccgatta ttgtcgccca ggatggttcg
    11941 ctttctggtc ctggtatggc ttgtaccaca gtcgccaaac agacttacgc cctgcctgca
    12001 cctcccgatt taagcggtgg cgcgggggca agttcagtgt ctggcccgca gggtgacatt
    12061 cttccggtca gtaactcgac gctaaaaagc gaagatccga ccggcgcgcc ggtaaccagt
    12121 agcggtttcc tcggcgctcc aacgacctta gcgcctggtg tactggaaag cagcgaaccg
    12181 acacctgcac cacagcccgt tgttacagct ccgtcgacaa cgcctgcaac ctcgcctgca
    12241 atggtgacac cgcaagccgc ctcgcaaagc gccagcggca actttatggt gcaagtcggg
    12301 gccgttagcg atcaggctcg tgcgcaacag taccaacagc aactgggaca gaagttcggc
    12361 gtccccggtc gcgtaactca aaatggcgcg gtctggcgta tccagcttgg cccattcgcc
    12421 agtaaagccg aagccagtac cttgcagcaa cgtttgcaaa ccgaagccca attacagtca
    12481 tttattacca ccgcgcagta gcgtaaagca ggcatctgat gtgtcaattt ctgtaaatga
    12541 cgttaacaaa gtcacgcgga aagtcagatg cctgccggta gtgcatttgc tatagtaggg
    12601 cacttttttt aattccatca cggatgtcgt agttcagacc atgaatacca ttttttccgc
    12661 tcgtatcatg aagcgcctgg cgctcaccac ggctctttgc acagccttta tctctgctgc
    12721 acatgccgat gacctgaata tcaaaactat gatcccgggt gtaccgcaga tcgatgcgga
    12781 gtcctacatc ctgattgact ataactccgg caaagtgctc gccgaacaga acgcagatgt
    12841 ccgccgcgat cctgccagcc tgaccaaaat gatgaccagt tacgttatcg gccaggcaat
    12901 gaaagccggt aaatttaaag aaactgattt agtcactatc ggcaacgacg catgggccac
    12961 cggtaacccg gtgtttaaag gttcttcgct gatgttcctc aaaccgggca tgcaggttcc
    13021 ggtttctcag ctgatccgcg gtattaacct gcaatcgggt aacgatgctt gcgtcgccat
    13081 ggccgatttt gccgctggta gccaggacgc ttttgttggc ttgatgaaca gctacgttaa
    13141 cgccctgggc ctgaaaaaca cccacttcca gacggtacat ggtctggatg ctgatggtca
    13201 gtacagctcc gcgcgagata tggcgctgat cggccaggca ttgatccgtg acgtaccgaa
    13261 tgaatactcg atctataaag aaaaagaatt tacgtttaac ggtattcgcc agctgaaccg
    13321 taacggcctg ttatgggata acagcctgaa tgtcgacggc atcaaaaccg gacacactga
    13381 caaagcaggt tacaaccttg ttgcttctgc gactgaaggc cagatgcgct tgatttctgc
    13441 ggtgatgggc ggacgtactt ttaaaggccg tgaagccgaa agtaaaaaac tgctaacctg
    13501 gggcttccgt ttcttcgaaa ccgttaaccc actgaaagta ggtaaagagt tcgcctctga
    13561 accggtttgg tttggtgatt ctgatcgcgc ttcgttaggg gttgataaag acgtgtacct
    13621 gaccattcca cgtggtcgca tgaaagatct gaaagccagc tatgtgctga acagcagtga
    13681 attgcatgcg ccgctgcaaa agaatcaggt cgtcggaact atcaacttcc agcttgatgg
    13741 caaaacgatc gagcaacgcc cgctggttgt gttgcaagaa atcccggaag gtaacttctt
    13801 cggcaaaatc attgattaca ttaaattaat gttccatcac tggtttggtt aaaaattgaa
    13861 cacttgaaag tgtaatttcc gtccccatat actaagcatc agtaaaaaaa ctcccgcctt
    13921 ctggcgggag ttgctattta attacgttac gccggagctg acatgaaaac caaacttaac
    13981 gaactgcttg aattccctac tccttttact tacaaagtta tggggcaggc gttacctgag
    14041 ctggttgatc aggtggttga agtggtacag cgccatgcgc caggtgacta caccccaacg
    14101 gtaaaaccaa gcagcaaagg caactaccac tcggtatcta tcactatcaa cgccactcat
    14161 atcgagcagg ttgaaacact gtatgaagaa ctgggcaaaa tcgatattgt ccgcatggtt
    14221 ctgtaactcg cttctccgtt acccggctcc tggtcgggta actcccctct cctcgctgtg
    14281 atatactttt cccccacttt tactcattct ccacggagat gccgttttgt atcaggataa
    14341 aattcttgtc cgccagctcg gtcttcagcc ttacgagcca atctcccagg ctatgcatga
    14401 attcaccgat acccgcgatg atagtaccct tgatgaaatc tggctggtcg agcactatcc
    14461 ggtattcacc caaggtcagg caggaaaagc ggagcacatt ttaatgccgg gtgatattcc
    14521 ggtgatccag agcgatcgcg gtgggcaggt gacttatcac gggccgggac aacaggtgat
    14581 gtatgtgttg cttaacctga aacgccgtaa actcggtgtg cgtgaactgg tgaccttgct
    14641 tgagcaaaca gtggtgaata ccctggctga actgggtata gaagcgcatc ctcgggctga
    14701 cgcgcctggt gtctatgtcg gggaaaagaa aatttgctca ctgggtttac gaattcgacg
    14761 cggttgttca ttccacggtc tggcattaaa cgtcaatatg gatctttcac catttttacg
    14821 tattaatcct tgtgggtatg ccggaatgga aatggctaaa atatcacaat ggaaacccga
    14881 agcgacgact aataatattg ctccacgttt actggaaaat attttagcgc tactaaacaa
    14941 tccggacttc gaatatatta ccgcttaatt ccatacctca atggcccaat ttacactggg
    15001 tcattactca taatacctgc taatgcttta catctccttc gcgtttgtat attttcttta
    15061 tcacttgcag aaatgcggtg ccacgccttg ctccgtaact caccccattg attaacctat
    15121 tgaaatagtt gattatggtg agcaaaagcg ttccgttcca attagacata agattattgt
    15181 aattttttaa atattatttt tccatgaata aaattggagt aagtgcgtgg atagtaataa
    15241 tcaaattgaa ccctgtttaa gcagaaagtc gtcagaaggt aaaccacaaa tatttacaac
    15301 cttacgaaat attgatctta accttctgac tatttttgaa gctgtatatg tacataaagg
    15361 gatcgttaat gcagcgaaag tgcttaatct gaccccctcg gcaatcagtc agtctattca
    15421 gaaactgcgc gttatattcc ctgacccatt gtttattcgc aaaggccagg gtgtcactcc
    15481 taccgcattt gcgatgcatc tacatgagta tatcagtcag ggccttgagt ccattcttgg
    15541 cgcgctggat atcgaaggaa gctatgataa gcaacgaacg ataactattg cgaccactcc
    15601 ctcggtcgga gccctggtcc ttcctgtcat ctatcgggcg attaaaactc actatccgca
    15661 gcttttactg cgcaacccgc ccatcagcga cgcggaaaac caactcagtc agtttcaaac
    15721 cgatctcatc atcgataaca tgttttgcac caatcgtacg gtgcaacatc atgttctgtt
    15781 caccgacaat atggtgttaa tttgccgcga gggaaatcca ctactctctt tagaagatga
    15841 cagagagact atcgacaacg ctgcgcatgt acttctgtta ccggaagagc aaaatttcag
    15901 cggtctgcgg cagagagttc aagaaatgtt tccggaccgg caaatcaatt tcaccagcta
    15961 caacattttg acaatcgctg cactggttgc caacagtgac atgttagcga ttattcccag
    16021 ccgtttttat aacctgttta gccgctgctg gccgctggaa aaactgcctt ttccgtcctt
    16081 aaatgaggag caaatagatt tctctatcca ctacaacaaa ttcagcctgc gtgatcccat
    16141 cctgcacgga gtaatagatg ttatccgtaa tgcattttga aaaagtattg ttacagccag
    16201 atcacagcgc agaacgataa aatggcacaa tccaacaaca attttacatt ttcgcgaccg
    16261 ctttggctgc tttcaggtcc gtttcaatga tatactgcca gtcgttaatt caaaaatagt
    16321 tgataattac aacaatctat tgaattgaaa cgctttcctt cgtaattcgc aactggaaca
    16381 cgcacgctat gagtaaaccc attgtgatgg aacgcggtgt taaataccgc gatgccgata
    16441 agatggccct tatcccggtt aaaaacgtgg caacagagcg cgaagccctg ctgcgcaagc
    16501 cggaatggat gaaaatcaag cttccagcgg actctacacg tatccagggc atcaaagccg
    16561 caatgcgcaa aaatggcctg cattctgtct gcgaggaagc ctcctgccct aacctggcgg
    16621 aatgcttcaa ccacggcaca gcaacgttta tgatcctcgg cgctatttgt acccgccgtt
    16681 gtccgttctg tgatgttgcc cacggtcgcc cggtagctcc tgatgccaat gaaccagtga
    16741 aactggcgca gaccattgcc gatatggcgc tgcgttatgt ggttatcacc tccgttgacc
    16801 gtgatgacct gcgcgatggc ggtgcccagc actttgcgga ttgcattact gccattcggg
    16861 aaaaaagccc gcaaatcaaa attgaaactc tggtgccgga tttccgtggt cgtatggatc
    16921 gtgctctgga tattctgact gcaacgccac cagatgtgtt caaccataac ctggaaaacg
    16981 taccgcgtat ttaccgtcag gtacggcctg gtgcagatta caactggtcg ctgaagctgc
    17041 tggaacgctt taaagaagcg catccggaaa tcccgaccaa gtctggtctg atggtgggac
    17101 tgggtgaaac caatgaagaa attattgagg taatgcgcga cctgcgccgt catggtgtga
    17161 cgatgttaac gctggggcaa tatttgcagc caagccgcca tcacctgccg gttcaacgtt
    17221 acgttagccc ggatgagttc gacgaaatga aagccgaagc gctggcgatg ggctttaccc
    17281 atgctgcatg cggtccgttt gtccgctctt cttaccacgc cgatttgcag gcgaaaggga
    17341 tggaagttaa gtaatcctgt aataattact tacatctgtc tgataaaaaa cccgcttttt
    17401 gaagcgggtt ttttgtatcg aacaagatat tgagggagcg tcctgctcgc cacgtcactc
    17461 tttatgagag agcttttcag cctgaagatc aacgtctgcg ccttttttcg ccgcagcatc
    17521 gtcatcattc atcgccttct tgaacccttt aatggccgct ccaaggtctc cgcccagcgt
    17581 acgtaacttc ttagtcccaa acagcagaac gaccagcgcc gcaactacta gcagtttggt
    17641 aatactaatc tcacccatag ataccttctt gacatataac cggcaacaga acgcgcctta
    17701 aaaaccagag aatattaacg gtcattcgac gcgcgcacac aatagcaatc tgtaacaagg
    17761 tgaatcaagc gccgagtaaa aaaacatcat aataattgcg gcggcgcaaa gcgacggttg
    17821 tttaagacgg gcagttgcgc gcgcacctga cgcacacgtt cgggcgtcac ttccgccata
    17881 atgagtgcag gcatttctga cgctgccgca atggtgacgc caaagggatc tataatccgg
    17941 ctttgaccga tatttttgtt cccgcactcc cccgccgcca ccatataaca ggtggtatcc
    18001 agcgcacgag cggcaagcaa cgttgaccag tgatgctctt tgagcggccc gcgaacccag
    18061 gcggcaggaa gtaccaggat ttcagctccc tgtaatgcct gtgccagcgc cagctctgga
    18121 aagcgtaagt cataacaggt catcagaccg accttcatcc cctccacctc gagtaacgga
    18181 gcgatttcat taccagcatc aacacggcgt gattcctgaa tggcaaatgc atcatagaga
    18241 tgcaatttgg cataacgggc gacgatgttt cctgcctgta gcgccaccag catattccat
    18301 gcgcgccccg gcgttgaagg aacatgaatc gtcagaattg tcgtcatcat gttacgttta
    18361 ctttctcgcc gtaaacgtcc gaggaattcg ccttccagca gctgtgctga tttaaccgat
    18421 agatctgcat catgatcatc gcgcgccagc aatgcttccg gcaggacgaa cagcgatacg
    18481 tcgttttccg ccgcctgcgc catcaacgag gcacaaatct cagcgttctt ttcccacaca
    18541 gatgtaacag caaactgtcc tgcggcaacc agcattgcca cctcctgtca gagtcgtaaa
    18601 attcgccaac gacgattatt cggcgttaca cttatcactc atacaaatca aatagcagga
    18661 ttttgcagtg ttacaacttc ttttagcagt ttttattggc ggtggtacgg gaagcgtggc
    18721 gagatggctg ttaagtatgc gatttaaccc gctgcatcag gcgattccgt tggggacgct
    18781 ggcagcaaac ctgattgggg cattcatcat aggaatggga ttcgcctggt tcagcaggat
    18841 gacgaacatt gatccagtgt ggaaagtatt aatcaccacc ggattttgtg gcggtctaac
    18901 aaccttctca acattttcgg cagaagtggt gtttttgtta caagagggcc gctttggctg
    18961 ggcgttactg aacgttttcg tcaaccttct ggggtctttt gccatgacag cactggcttt
    19021 ctggctgttt tcggcctcaa ccgcacacta aagaccaaaa aaaaacccgc tgattaagcg
    19081 ggttttgaat tcttgctgac gtatcttaca gagcgattac gtttgcagca gaagggcctt
    19141 tggcaccgtt agtgatttcg aactctacgc gctgaccttc agcaagagtt ttaaaaccat
    19201 tagtctggat tgcagagaag tgtacgaaca cgtctttgct gccgtcttcc ggagtaatga
    19261 aaccgaatcc tttggactca ttaaaccact taacgttacc tttaatctta gacatcaaaa
    19321 ttacctttac atgaaaaata gacacaaatg ctgtgtcggt taccagtaca ccaattgtgg
    19381 tacgctttgt ccagtgcaac tttactaaaa agtgataaaa gtcgcgttat ttttgatgtt
    19441 acttatttta gctattgatt ttaaagaagt tactaaaact tcatttgtct caaaactgaa
    19501 agcgcatcca ggcaaagtac acattgccat tgttgtaggt acccggaatg taggtcatct
    19561 gaaaagtcac tgggccataa cccacggagg ccaatggcag tagaaccggg agagggatgt
    19621 aattccagtt atcgcgtgcc gttacgccag cggtgaatcc cagacctaaa tgaaaatttt
    19681 catccgccag cggtcgccag gtactttccc atccgtatcc ggcaatcggt tcccatttgt
    19741 tccacgagtc cttaaatgcc atggcataca ggccatgcca gtttcctttt tcatcccaac
    19801 gcgacaggcc aaaaccgcca ccccacggtc gctcgttata gcgatcggtt ttttctttgt
    19861 cgtaagcgaa acgtgcatgc caggtgatgg caggaatata taaatcataa tgttcaggct
    19921 gttgccaggt ttgtgcaata ttttctctaa acgttgtcat ccactcatct gcgttagcaa
    19981 aaactttacc aacgctgatt aactgaataa aaacaaagga aaagatagcg acatatttac
    20041 tcacgttcat ttgtgaccat aaaacattta tcaaaaatct actactagca tagcaaagct
    20101 acaattaaca taaccttaat agacccaaca taaagaataa tctgaatagc tgc
//
LOCUS       DAPGWB010000079        20086 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.079, whole genome shotgun sequence.
ACCESSION   DAPGWB010000079 DAPGWB010000000
VERSION     DAPGWB010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 20086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20086
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.079"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(132..878)
                     /gene="cutC"
                     /locus_tag="RHX79_002730"
     CDS             complement(132..878)
                     /gene="cutC"
                     /locus_tag="RHX79_002730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025309.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HDV2197883.1"
                     /translation="MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLK
                     SVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVD
                     MPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSK
                     IMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSS
                     DEHADEYSRYIVDGAAVAEMKGIIERHQAK"
     gene            complement(892..1458)
                     /locus_tag="RHX79_002731"
     CDS             complement(892..1458)
                     /locus_tag="RHX79_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310612.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDV2197884.1"
                     /translation="MANWQSIDELQDIASDLPRFTHALDELSRRLGLNITPLTADHIS
                     LRCHQNVTAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPG
                     EKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEHERLPNP
                     TLAVTDGKTTIKFHPWSIEEIVASEQSA"
     gene            1674..3407
                     /gene="argS"
                     /locus_tag="RHX79_002732"
     CDS             1674..3407
                     /gene="argS"
                     /locus_tag="RHX79_002732"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDV2197885.1"
                     /translation="MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGM
                     MAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALAS
                     DRLGVSTPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG
                     DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQ
                     SGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG
                     LAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
                     YYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD
                     LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML
                     AFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAAPVIIREDREAQLAARLLQFEETLT
                     VVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGL
                     DTLGIETVERM"
     gene            3584..4072
                     /locus_tag="RHX79_002733"
     CDS             3584..4072
                     /locus_tag="RHX79_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HDV2197886.1"
                     /translation="MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDT
                     DINVIKSCLRQEYNLVDAQLNKAYGEAYRYIEQVPRTGVKKPDTEQLNLLKKSQRAWL
                     DFRDKECELILSNEDVQDLSDPYSESEWLSCMIIQTNTRTRQLQLYHNSEDFYPSPLT
                     RG"
     gene            complement(4192..4584)
                     /gene="flhe"
                     /locus_tag="RHX79_002734"
     CDS             complement(4192..4584)
                     /gene="flhe"
                     /locus_tag="RHX79_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlhE"
                     /protein_id="HDV2197887.1"
                     /translation="MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLS
                     TRQPASGLMTLVAWRYQLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPL
                     RFIWEVPGGGRLIPPLKVQRNEVIVNYR"
     gene            complement(4584..6662)
                     /gene="flhA"
                     /locus_tag="RHX79_002735"
     CDS             complement(4584..6662)
                     /gene="flhA"
                     /locus_tag="RHX79_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HDV2197888.1"
                     /translation="MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFIL
                     DLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHT
                     GAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGM
                     PGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVI
                     NVVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQD
                     VGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGREQKA
                     PAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRK
                     KFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLP
                     GEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQE
                     AQQLLDRVAQEMPKLTEDLVPGIVTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAP
                     IQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGL
                     ADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRH
                     IRMTATIGGK"
     gene            complement(6655..7803)
                     /gene="flhB"
                     /locus_tag="RHX79_002736"
     CDS             complement(6655..7803)
                     /gene="flhB"
                     /locus_tag="RHX79_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
                     /protein_id="HDV2197889.1"
                     /translation="MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSV
                     IWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLV
                     ALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTG
                     FFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKK
                     LRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVAL
                     QYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQ
                     LYAAVAEVLAWVWQLKRWRLAGGQRPVQPTHLPVPEALDFINEKPTHE"
     gene            complement(8005..8649)
                     /gene="cheZ"
                     /locus_tag="RHX79_002737"
     CDS             complement(8005..8649)
                     /gene="cheZ"
                     /locus_tag="RHX79_002737"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HDV2197890.1"
                     /translation="MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEA
                     AEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPI
                     DLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIE
                     RQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF"
     gene            complement(8660..9049)
                     /gene="cheY"
                     /locus_tag="RHX79_002738"
     CDS             complement(8660..9049)
                     /gene="cheY"
                     /locus_tag="RHX79_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002210873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HDV2197891.1"
                     /translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN
                     KLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAG
                     ASGYVVKPFTAATLEEKLNKIFEKLGM"
     gene            complement(9064..10113)
                     /gene="cheB"
                     /locus_tag="RHX79_002739"
     CDS             complement(9064..10113)
                     /gene="cheB"
                     /locus_tag="RHX79_002739"
                     /EC_number="3.1.1.61"
                     /EC_number="3.5.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate methylesterase/protein
                     glutamine deamidase"
                     /protein_id="HDV2197892.1"
                     /translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL
                     IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI
                     DFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIA
                     IGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGE
                     RVLPGHAYIAPGDRHMELSRSGANYQIKIHDGPAVNRHRPSVDVLFHSVAKQAGRNAV
                     GVILTGMGNDGAAGMLAMRQAGAWTLAQNEASCVVFGMPREAINMGGVCEVVDLSQVS
                     QQMLAKISAGQAIRI"
     gene            complement(10116..10976)
                     /gene="cheR"
                     /locus_tag="RHX79_002740"
     CDS             complement(10116..10976)
                     /gene="cheR"
                     /locus_tag="RHX79_002740"
                     /EC_number="2.1.1.80"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HDV2197893.1"
                     /translation="MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLAD
                     HKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHH
                     FPLLADHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVL
                     EKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQY
                     TVPGPFDAIFCRNVMIYFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLR
                     GQTVYALSKD"
     gene            complement(10995..12596)
                     /gene="tap"
                     /locus_tag="RHX79_002741"
     CDS             complement(10995..12596)
                     /gene="tap"
                     /locus_tag="RHX79_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein IV"
                     /protein_id="HDV2197894.1"
                     /translation="MFNRIRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNQVE
                     QSNQQRAALAQTRAVMLQASTALNKAGTLTALSYPADDIKTLMTTARASLTQSTTLFK
                     SFMAMTAGNEHVRALQKETEKSFARWHNDLEHQATWLESNQLSDFLTAPVQESQNAFD
                     VNFEAWQLEINHVLEAASAQSQRNYQISALVFISMIIVAAIYISSALWWTRKMIVQPL
                     AIIGSHFDSIAAGNLARPIAVYGRNEITAIFASLKTMQQALRGTVSDVRKGSQEMHIG
                     IAEIVAGNNDLSSRTEQQAASLAQTAASMEQLTATVGQNADNARQASELAKNAATTAQ
                     AGGVQVSTMTHTMQEIATSSQKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGF
                     AVVAGEVRNLASRSAQAAKEIKGLIEESVNRVQQGSKLVNNAAATMIDIVSSVTRVND
                     IMGEIASASEEQQRGIEQVAQAVSQMDQVTQQNASLVEEAAVATEQLANQADHLSSRV
                     AVFTLEEHEVARHESAQLQIAPVVS"
     gene            complement(12642..14303)
                     /gene="tar"
                     /locus_tag="RHX79_002742"
     CDS             complement(12642..14303)
                     /gene="tar"
                     /locus_tag="RHX79_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein II"
                     /protein_id="HDV2197895.1"
                     /translation="MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSN
                     QLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAAT
                     HYKKFKSMAPLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNA
                     MGEAFAQYALSSEKLYRDIVTDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLT
                     PLAKIIAHIREIAGGNLANTLTIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIY
                     AGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDT
                     AQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGR
                     GFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRV
                     TDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQ
                     AVSAFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNWETF"
     gene            complement(14448..14951)
                     /gene="cheW"
                     /locus_tag="RHX79_002743"
     CDS             complement(14448..14951)
                     /gene="cheW"
                     /locus_tag="RHX79_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HDV2197896.1"
                     /translation="MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQ
                     VTRIANTPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVV
                     DGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLD
                     SAASEVA"
     gene            complement(14972..16936)
                     /gene="cheA"
                     /locus_tag="RHX79_002744"
     CDS             complement(14972..16936)
                     /gene="cheA"
                     /locus_tag="RHX79_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HDV2197897.1"
                     /translation="MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIF
                     RAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL
                     DAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQLPR
                     RIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA
                     DQITFETVEVSPKIATPPVLKLAAEQAPTGRVEREKTTRSSESTSIRVAVEKVDQLIN
                     LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS
                     RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKR
                     LAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEV
                     AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTGTTIRILLPLT
                     LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK
                     VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT
                     ILGDGSVALIVDVSALQAINREQRMANTAA"
     gene            complement(16941..17867)
                     /gene="motB"
                     /locus_tag="RHX79_002745"
     CDS             complement(16941..17867)
                     /gene="motB"
                     /locus_tag="RHX79_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HDV2197898.1"
                     /translation="MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVM
                     WLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPN
                     IEELKKRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPM
                     FKTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRA
                     NASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHE
                     NAESQNEPVSALEKPEVAPQVSVPTMPSAEPR"
     gene            complement(17864..18751)
                     /gene="motA"
                     /locus_tag="RHX79_002746"
     CDS             complement(17864..18751)
                     /gene="motA"
                     /locus_tag="RHX79_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HDV2197899.1"
                     /translation="MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGS
                     FIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIE
                     NPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEV
                     PANSLALVGDSLPAFGIVAAVMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYG
                     FISPLATVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIEL
                     EEHVRAVKNPQQQTTTEEA"
     gene            complement(18878..19456)
                     /gene="flhC"
                     /locus_tag="RHX79_002747"
     CDS             complement(18878..19456)
                     /gene="flhC"
                     /locus_tag="RHX79_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhC"
                     /protein_id="HDV2197900.1"
                     /translation="MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLY
                     KELRGSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLY
                     LEQCPQAEEGPLLALTRAWTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLC
                     QPPSRAVKRRKLSQNPADIIPQLLDEQRVQAV"
     gene            complement(19459..19809)
                     /gene="flhD"
                     /locus_tag="RHX79_002748"
     CDS             complement(19459..19809)
                     /gene="flhD"
                     /locus_tag="RHX79_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhD"
                     /protein_id="HDV2197901.1"
                     /translation="MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMAT
                     TLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLN
                     DVNQPEEALRKKRA"
BASE COUNT         4797 a         5542 c         4905 g         4842 t
ORIGIN      
        1 cacccgctca acagatcacg gttatcgttc gttttttata ctgctcaggg ataaaaaaag
       61 gcccctgttg aaattgcagg ggcctggtac gagcaagcat catattgggc gacatgatgc
      121 aacggtaaaa atcatttggc ctgatggcgt tcaatgattc ctttcatttc agcaaccgcc
      181 gccccgtcta cgatataacg cgaatactcg tccgcgtgtt catctgatga catggacaat
      241 ccttgattac gataacgcat cggtgaggct tgccacgctc ccgcggagct atggacttcc
      301 agcactccgg catcgaggaa gtggtgcagg ttttctgcac ggactcctgc tccggccata
      361 atgattggag catcacgatg ggcaataagt tccataattt ttgataaacc ttgcagtgcg
      421 tctgattttt gccctgatgt cagtacccgg gcaatgccca attccgcaag attattgagt
      481 gtatataaag ggttagcgca catatcgaag gcgcgatgaa aagtcactgc cagcggaccg
      541 gcagcagcca ttattttttc cattcgtggc atatcgacat tcccgtcaac atcgagaacg
      601 cccgtcacca gtccaggaaa acctaattcg cggaccgtgc gcacatcctc aagaatggcg
      661 gcaaactcac cgtcgctgta gcaaaaatca ccaccgcgtg ggcgaattat cggatgcaca
      721 gggatcgtca cccgctggcg cacggatttc agtaccccca acgacggcgt taagcccccc
      781 tcttttgggg ctgcgcataa ttcaactctg tctgcgccgt tttgctgcgc cgttagtgca
      841 cattccatgc tgtaacagca aatttccagt aatgccattt ttgctcctta attacgctga
      901 ctgctcgctg gcaacgatct cttcaatgga ccacggatga aacttaatag ttgttttgcc
      961 atcggtgacc gccagcgtcg gattcggtaa tcgctcatgc tcaccttttg gtgaactggt
     1021 tttaactgag atccccggta ggctgagtcc ttcatcagaa agcaatgcca gcgcacgggc
     1081 attcagcgtt tctggatcac ccggcagaac gatttcaata tgttcccaac cttcgtgtgg
     1141 gtaacgtttt tccccgggcc acggtagctc cacaatagaa aactgccagt gcgcaacctg
     1201 taccggttca tgcaatttaa acagacaaat cggtctgcca ttgatcatat tttctgacaa
     1261 aagctcgcca cactgttcaa acccgcgacg ccagcgctca gcggtgacgt tttgatggca
     1321 acgcaaagaa atgtgatcgg cagtcagcgg agtgatattc aaccccagac ggcgggaaag
     1381 ttcatctaat gcgtgggtaa atcgcggtaa atccgatgca atatcctgca gctcatcgat
     1441 agattgccag ttcgccataa tcactcttcg tctttcagta aaagcgttaa tttaccctgt
     1501 tgccctgtgt caaccaaccg ctgatttcac gccgcttctg atgcaatagt gaaaacggca
     1561 atacgccacg cgcacgttgc tgacgaaaac agccatttgc agtatactcc cgccctaatt
     1621 tctttaactg gtgcgggcaa tttttgctcg cttcatcaat gtaaggtatt ccggtgaata
     1681 ttcaggctct tctctcagaa aaagtccgtc aggccatgat tgcggcaggc gcgcctgcgg
     1741 attgcgaacc gcaggttcgt cagtcagcaa aagttcagtt cggcgactat caggctaacg
     1801 gcatgatggc agttgctaaa aaactgggta tggcaccgcg acaattagca gagcaggtgc
     1861 tgactcatct ggatcttaac ggtatcgcca gcaaagttga gatcgccggt ccaggcttta
     1921 tcaacatttt ccttgatccg gcattcctgg ctgaacatgt tcagcaggcg ctggcgtccg
     1981 atcgtctcgg tgtttctacg ccagaaaaac agaccattgt ggttgactac tctgcgccaa
     2041 acgtggcgaa agagatgcat gtcggtcacc tgcgctctac cattattggt gacgcagcag
     2101 tgcgtactct ggagttcctc ggtcacaaag tgattcgcgc aaaccacgtc ggcgactggg
     2161 gcactcagtt cggtatgctg attgcatggc tggaaaagca gcagcaggaa aacgccggtg
     2221 aaatggagct ggctgacctt gaaggtttct accgcgatgc gaaaaagcat tacgacgaag
     2281 atgaagagtt tgccgagcgt gcacgtaact acgtggtaaa actgcaaagc ggtgacgaat
     2341 atttccgcga gatgtggcgc aaactggtcg acatcaccat gacgcagaac cagatcacct
     2401 acgatcgtct caacgtgacg ctgacccgtg atgacgtgat gggcgaaagc ctctacaacc
     2461 caatgctgcc aggaattgtg gcggatctca aagccaaagg tctggcagta gaaagcgaag
     2521 gggcgaccgt cgtattcctt gatgagttta aaaacaagga aggcgaaccg atgggcgtga
     2581 tcattcagaa gaaagatggc ggctatctct acaccaccac tgatatcgcc tgtgcgaaat
     2641 atcgttatga aacactgcat gccgatcgcg tgctgtatta catcgactcc cgtcagcatc
     2701 aacacctgat gcaggcatgg gcgatcgtcc gtaaagcagg ctatgtaccg gaatccgtac
     2761 cgctggaaca ccacatgttc ggcatgatgc tgggtaaaga cggcaaaccg ttcaaaaccc
     2821 gcgcgggtgg tacagtgaaa ctggccgatc tgctggatga agccctggaa cgtgcacgcc
     2881 gtctggtggc agaaaagaac ccggatatgc cagctgacga gctggaaaaa ctggctaacg
     2941 cggttggtat tggtgcggtg aaatatgcgg atctctccaa aaaccgcacc acggactaca
     3001 tcttcgactg ggacaacatg ctggcgtttg agggtaatac cgcgccatac atgcagtatg
     3061 cttacacgcg tgtattgtcc gtgttccgta aggcagaaat taacgaagag caactggctg
     3121 cagctccggt aatcatccgt gaagatcgtg aagcgcaact ggcagctcgc ctgctgcagt
     3181 ttgaagaaac cctcaccgtg gttgcccgtg aaggcacgcc gcatgtgatg tgtgcttacc
     3241 tgtacgatct ggctggtctg ttctctggct tctacgagca ctgcccgatc ctcagcgcag
     3301 aaaacgaaga agtgcgtaac agccgtctga aactggcaca actgacagcg aagacgctaa
     3361 agctgggtct ggatacgctg ggtattgaga cagtagagcg tatgtaatcg atttttcgtg
     3421 agagtaaagc ctgatcaggg ttacctgatc aggctttttt attgccatct aaatgtattc
     3481 tgaaaatgga catgccattg ttttctgact gttggataag aggccagaag cgtaatatcc
     3541 ggccccaggg aaacgataac ggttgaattt aaggaatacc gcagtgttta aatttcttgt
     3601 attaacatta ggcattatct cttgccaggc ttacgcagaa gatacggtta tagtaaacga
     3661 ccatgacatt tcagccatca aagattgttg gcaaaaaaat tcagatgatg atactgacat
     3721 taacgtgatc aaatcatgcc tgcgacaaga atacaatctc gtcgatgcgc aattaaataa
     3781 agcctatggt gaagcttatc gttatataga acaagtgcca cgcacaggtg taaaaaaacc
     3841 tgataccgaa caacttaact tgcttaaaaa atcacagcga gcctggctgg attttaggga
     3901 caaagaatgt gaattaatcc tttcaaatga ggacgttcag gatttaagtg acccttattc
     3961 tgaatcagaa tggctctcat gtatgatcat acagaccaat acgcgaactc gccagttgca
     4021 gctataccat aactctgaag atttttatcc aagccctttg acaagaggat aattcacatc
     4081 tttttggcat gttttgttgc aagctattcc tgataaataa ttgcaacaag acatcgagcc
     4141 tttttcactg agttattaaa catactcgcg agcgcgtaat ttttttgtcc ttcagcgata
     4201 attcacaatc acttcattac gttgtacctt tagcggtgga attaaccgcc caccgcctgg
     4261 cacttcccag ataaatcgca acggttctgc tgccgctata ccggaaaagg ccacggtggt
     4321 tccgctctgc ccctctaatt cgacacaacg agattgcgaa cacaaacgaa cccgcagtcc
     4381 tgaaggtgtc gggccgataa gctgataacg ccacgctacc agcgtcatca atcctgaagc
     4441 aggttgtcgc gtagaaagag gcgcagacga catcgactca ccgcgatgat ttagcgtaat
     4501 tcctacacta cttgcctgcc acatcccctc cccggcggct tgcaccagca gcggaaacaa
     4561 taatattgct aataaggttc tcattatttg ccgccaattg tcgccgtcat gcggatatgt
     4621 cggttatcag acagttccag attcgacagg accactaact gcggcaagct gcggcgcagg
     4681 aagcgagaca ataatggtcg cagcgcgtgg ttcaccaaca atactggcgg cgcacccagc
     4741 atctcctgac gggatagcgc ttcctgagtt tgcgccagta aacgatccgc cagccctggc
     4801 tccagtcctc ccccgccctg cagcgcctgt agtaacaaac gttccagcgg tgtatcgagg
     4861 ccaataacat ggacttcatc tttgccagga aaccactgct gggtaatcgc ccgtcccaac
     4921 gccacgcgca cgacggcggt taattcatgt ggatcgcttt ggatgggcgc atgttccgcc
     4981 agcgtttcga gaatggtgcg catatcgcga atcggtactt tttcatcgag gagattttgc
     5041 agcactttat gcagtgtggt gagcgtgacg atgccaggaa cgagatcttc cgtcagcttt
     5101 ggcatctcct gggcgacgcg atccaacagc tgttgcgcct cctgacgacc aaacagctct
     5161 gcggcatgct ggctaatgag gtggttaaga tgcgttgcta ccaccgtgct ggcctcaacc
     5221 actgtgtacc cctgaatctg cgcctgttct tttagcgcac tttcaatcca gatagcattc
     5281 aggccaaatg ccggatcgac ggtcgcctca ccaggtaacg tcccggcagc ggttccaggg
     5341 ttaatcgcca gccagcgccc cggataagca tcaccactgc caatctccac gcctttcatc
     5401 aaaatgcgat agcgggcagg ttgcagatcc atattgtcgc gaatgtgcac cactggcggc
     5461 agaaatccca tctcctgggc aaatttcttg cggatactgc gtatacggcc caacaactca
     5521 ccatcctgct ggaaatcgac catcgggatc agtcgataac ccacttccat tcccagagaa
     5581 tcttccagtt gtacatcgtt ccacgtcgct tcgacaacgg tattattctc tgccattttt
     5641 accggtttgg gttcggcagg cgctttttgt tcgcgtccgc gtatccacca ggccagcccc
     5701 agcaatccgg cagtgaacag caaaaatacc aggttcggca ttccaggcac caggccgagt
     5761 aaaccgagca cggcggcgct taacaacata acgcttgggt tactgaaaag ctgattcacc
     5821 atctgctcgc caacatcctg atcggtgctg acacgcgtaa cgatgacccc cgcggcggta
     5881 gaaatcacca gcgccggaat ttgtgccacc agaccgtcgc caatggtcaa tagcgtataa
     5941 ctttccgccg cgtgtcccat gctcatgcca tgttgcagca cgccgaccag caacccgccg
     6001 acaacgttaa tgaccatgat gaggatcccg gcgatggcat cgccgcgaac aaacttactt
     6061 gccccgtcca ttgagccgta aaaatcggct tcctgagtca cttcggagcg gcgttttttc
     6121 gcctcatctt caccaatcaa tccagcgtta aggtcggcgt caatcgccat ctgcttaccc
     6181 ggcataccat cgagaacaaa gcgcgcaccc acttctgcga tacgcccggc acctttggta
     6241 atgaccataa agttgatgat cacgagaatg acaaacacca cgatacctat agcgaaattg
     6301 ccaccaacga ggaagtgacc gaacgcttcg accaccttcc ctgccgccgc cgcgccggta
     6361 tgcccttcca tcaaaatgat acgggttgaa gccacgttaa gtgccagacg caacaacgta
     6421 gtaaacaaca gaatggtcgg aaacgcagca aactcaagcg tgcgctgggt aaacatcgcc
     6481 accagcaaca ccatgatcga caaggcaata ttgaaggtaa acaacaggtc gagtatgaat
     6541 gcgggcagtg gcagcaccat catcgacaag atcaacagga tcaaaatcgg tccggcaagg
     6601 atctgccatt gtgtcgattt caggtttgcg ggcaggcgca gcatcgcggc cagattactc
     6661 atgggtcggt ttctcgttaa taaaatccag ggcttccggc accggaagat gagtaggttg
     6721 tacagggcgc tgtccaccag ccagacgcca gcgtttcagt tgccagaccc aggccagcac
     6781 ttccgccacc gcggcgtaca gttgacccgg gatttgttga ccaatctccg catgtcgata
     6841 cagcgctcgc gccagcggcg gcgcttcaag cgtcgggacg ttattttcag cgccaatttc
     6901 acgaatgcgc agcgcgacca gccctgcacc tttagcgacc actttcggtg cgctcatttt
     6961 gttttcgtca tactgcaacg ctaccgaata gtgggtcggg ttattgacaa tgacatccgc
     7021 tttcggcaca tcggccatca tccgacgccg tgcagcagct cgctgcatct gacggatccg
     7081 ccctttaaca tgagggtcac cttcgctttg tttgaactca tcacgaatat cctgccgtga
     7141 catacgcagc tttttcaggt ggctgaatat ttggaaaaag acgtcaaatc ccaccattgg
     7201 aatgacacca agcaccacca gcagtgcgca tagccctacc aaatccatcg cattacccat
     7261 ggcggtaatc ggagactcgg ccatcaagcg catcatctgc ggccagtgat gccagagaaa
     7321 aaaccccgtc acgctgccaa ccaggatggt tttcaaaatt gctttaagca actccgcgcc
     7381 agtctgagcc gagaacatcc gtttaatgcc cggtagcggg ttgagtttgg aaaacttcgg
     7441 ctgcaaggat ttgccgctaa ataccagccc tcccagcatg accggagaaa tgagcgccac
     7501 cagcaccacg ccgctaatca gcggcagcag cgccagcatg gcttctctga tcagcagaat
     7561 aatctgcccg aggatcagat tcgggtcatt gataatactg tgatcaaaat gcagcccagc
     7621 ggagagcatg cccgacaatc gacgggccag cgacacaccg ccaaaccaga taacactaac
     7681 gcccaccagc aaaatcagca gtgaggtcag ttcacgggaa cgcgggattt gcccctcttc
     7741 ccgcgctttt tctagtcggt gaggtgtggg ggcttctgtt ttgtcgtcgc tctcgtcaga
     7801 cacgtcgcca atcctggaaa gagtattaag cgtgaatgat gccagagcgc aaagcgttca
     7861 atggtttgag taaggggcaa aacaggcggg atttagggct tttgctgcca cacatcaagc
     7921 atagtgtgcg tttgtcggat gcggcgtcat cgccttatca gaccgcctga tatgacgtgg
     7981 tcacgccaca tcaggcaata caaatcaaaa tccaagacta tccaacaaat cgtccacctg
     8041 atcctgactg gctaccacac cggctttgct ggtatcgacc tgaggtccat taagcaaact
     8101 ctggttttca cgttttggac gcgactcctg ttccgggatg ttttccaaca gcaccatcag
     8161 caactggcgt tcgatctcct gaatgacatc catcatccgc ttaatgacct gcccggtgag
     8221 atcctgaaaa tcctgcgcca tcatgatttc cagcagttgc gcgttagtaa agctggtatg
     8281 cgcgggtaca tctgccagaa attgtcgtgt atctgttacc agttcacggg cgtcggcaag
     8341 gtcaatcgga tcggcaaacc agtcatccca acgttgggtt aacgcttttg ctgatttctc
     8401 catttgatcc tgatgcggtt gtgacgcctc aacactgttc agcgcccgct ccgcagcctg
     8461 ggcggtcatc tgcacaacat agtacaaacg atcgcgcgca tcggggatgg cttccgccgc
     8521 ttcggcaatg gcctgatcca gccccagttc ccgcaaactg tcgcgcagca tacgcgtcag
     8581 gctgccgatg cgcgcaatga tatcgccagc tgaatgctcg tcagcaggtt tgattgatgg
     8641 ttgcatcata gtcgcatcct cacatgccca gtttctcaaa gattttgttg agtttttcct
     8701 ccagcgtcgc ggcggtaaat ggcttcacca catagccact ggcccccgct tgcgccgcag
     8761 caatgatgtt ctctttcttc gcttctgcag tcaccattaa cactggcaat gccgacatcg
     8821 cgccatccgc acgaattgtt ttcagcaatt ccaggccatc catattgggc atgttccagt
     8881 cggagataac aaatccataa ccgcctgcct gcaacttatt gagagcgtcg acgccatctt
     8941 ccgcttcctc aacattattg aatcccagct ctttcagcag gttacgcact atgcgtcgca
     9001 tggtggaaaa gtcatccaca accaaaaatt taagttcttt atccgccatt tcacactcct
     9061 gatttaaata cgtatcgcct gtccggcact aatttttgcc aacatttgct ggcttacctg
     9121 gctaagatcg accacttcgc agacaccacc catattgatg gcctcgcgcg gcatgccgaa
     9181 caccacgcaa cttgcttcgt tttgcgcaag ggtccatgcc cccgcctgac gcatcgccaa
     9241 cattcccgcc gcgccgtcgt tgcccatacc ggtcaggatc accccaaccg cattacgccc
     9301 cgcctgtttg gcgacagaat ggaacaacac atctaccgaa ggccgatgac ggttaaccgc
     9361 cgggccatcg tgaattttga tttggtaatt tgcgccacta cgcgacagct ccatatgccg
     9421 atcgcccggc gcgatatagg catgtcccgg caaaacacgt tctccgtctt cggcttcttt
     9481 aaccccgatc tgacaaagct tattaagtct gtcggcaaaa gagcgggtga aaccaggcgg
     9541 catatgctgg gtaattaaca gtgccgggct ggaaagcggc aacggttgca gtacgtgacg
     9601 aattgcctca gttccacccg ttgaagcacc aatcgcaatc agtttttcag aactcaacaa
     9661 cggccctgcc ttcagcgttg tcggtgccga caatggctta tgtgctgcaa ggctcgcctt
     9721 tgctgctgta cgcacctttt cagcaatcat ttcgctatac gccagcattc cttcgcgaat
     9781 acccagttgc ggtttggtga caaaatctat tgcccccagc tccagcgcgc gcagcgtgac
     9841 ttctgatcct ttgccggtca aggaagaaac catcacaacg ggcattggac gcaaacgcat
     9901 taatttttcg aggaaatcca gtccgtccat ccgcggcatt tcaacatcca gcgtcagcac
     9961 atcgggattg aatttcttaa tcaagtcacg cgcgaccagc ggatcaggcg cggtcgccac
    10021 catttccatg tcgctatggc tgttgatgat ttctgtcatg atctggcgca tcagtgccga
    10081 atcatcgaca gataacaccc tgattttgct catcgttaat ccttacttag cgcatacacc
    10141 gtctgaccac gcagcgtgaa gcggcgctca aggtggctaa agttttcaga gtgacccgca
    10201 aacagcaatc cgtcgggttt aaggagcgga acaaagcggc gcaaaatctc ctgctgggta
    10261 ttttgatcga agtagatcat gacgttacga cagaagatcg catcaaacgg ccccggcacg
    10321 gtgtactgtt tcgccagtag attcagcggg gcaaaatcaa catagttcgc cagctcctga
    10381 cgcacgcgta ccagcccttc atgcggtccc gtccctcgca tgaaataccg ttgcagttgc
    10441 tgcggcgtca ggtttttcaa ctcttcatgg cgataaatac cgcttctggc tttttccagc
    10501 acttcggtgt cgatatcact ggcaaacact ttccagcgtc cgggcgcggt gcccaatgtg
    10561 tcagccagcg tcatcgcaat gctgtacggc tcttcgccgg tcgaagccgc cgcgctccat
    10621 acgcgatact cgccagaacg gcgacgtgcg tgatccgcga gcagagggaa atggtgtgcc
    10681 tcacggaaaa atgccgtcag attcgtggtc agcgaattga taaacgcctg ccactcaccg
    10741 ctgtgctgat tagattccag caagttcaga taatgaccga aatccgtcag tcccagcgaa
    10801 cgcaaacgac gaaccagtcg gttgtaaacc atgtcgcgtt tatggtcagc cagaacgatc
    10861 ccggctcgtt gatagatcaa ttgacttatc cgccgaaaat gcgcgtcgga aagcgccagg
    10921 cgctcggtca tctgtaacaa taaagacgtt tgcccacagg gcagagatga agtcatagcg
    10981 ccttctcaat cacttcagga taccactggc gcaatttgta actgcgccga ctcatgtcgt
    11041 gctacttcat gttcttcaag ggtaaatacc gccacacgcg acgaaagatg gtcggcctga
    11101 ttcgccagtt gttccgttgc caccgccgct tcttctacca gcgaggcgtt ctgctgagtc
    11161 acctgatcca tctggctgac agcctgtgca acctgctcaa tcccccgctg ttgttcttcc
    11221 gacgcagagg caatttctcc cataatgtcg ttcacgcggg tcaccgaact gacaatatcg
    11281 atcatggtcg cggcggcgtt attcaccagt ttcgaaccct gctggacacg attgactgac
    11341 tcttcgatca gccctttgat ctcttttgct gcctgcgcgc tacggctggc aagattgcgc
    11401 acttcacctg ccactaccgc aaaaccacgc ccctgctctc cggcgcgagc cgcttccact
    11461 gccgcattca gggccagaat attggtctgg aaagcaattc cgtcgataac gctgataatg
    11521 tcgccaattt tttgcgagct ggtggcgatc tcctgcatgg tgtgagtcat ggtactgacc
    11581 tgaacaccgc ccgcctgcgc cgttgtcgcg gcattttttg ccagttccga cgcctgtcgt
    11641 gcgttatcgg cgttttgccc taccgtggcg gttaattgct ccatactggc ggccgtttgt
    11701 gccagcgatg ccgcctgctg ttcggtacga cttgagagat cgttattgcc tgcgacaatc
    11761 tccgcgatac caatgtgcat ctcctggctt cccttacgca catcactcac cgtcccacgc
    11821 aaagcctgct gcatggtctt caggctggca aaaatggcgg tgatctcatt acgaccatat
    11881 accgcaatcg gacgcgccag attacccgca gcaatgctgt caaaatggct accgataatg
    11941 gccagtggtt gaacaatcat cttgcgcgtc caccacagcg cactgctgat gtagatcgcc
    12001 gcaacaataa tcatgctgat aaacaccagc gccgaaatct gatagttacg ctggctttgc
    12061 gcactggcgg cttccagcac atggttgatc tccagctgcc aggcctcaaa gttaacgtca
    12121 aacgcattct gtgattcctg caccggcgca gtgaggaaat ccgaaagttg attactttca
    12181 agccaggtcg cctgatgttc gagatcgttg tgccagcggg caaaactttt ctccgtctct
    12241 ttttgcaacg ccctgacgtg ctcgttgccc gcagtcatcg ccataaaact tttaaacagc
    12301 gtggtggatt gcgtcagact ggcgcgcgcc gtcgtcatca acgttttaat gtcatccgcc
    12361 ggatagctaa gtgccgtcag agtgcccgct ttgttcagcg cggtactggc ctgtaacatt
    12421 accgcccgag tttgcgctaa tgccgcacgt tgctgattgc tctgctcgac ctgattcagt
    12481 cgttgcaaat cgtcgcgaaa tgcccaaaaa gacatgccgt tactgccaat ctgcaagatc
    12541 ccgcagagaa tcaaaattaa aaacagcgtg gtcgaaattc gaatacgatt aaacatcaac
    12601 gctccccatc aggcggcaat gaccgcgtta gtaaatactc gtcaaaatgt ttcccagttt
    12661 ggatcttgtt cagcaattcg cagtcgtggc tgtgccggtg gttgctcact ggcaggacgg
    12721 gatggtgttt gcggtttatt ggtgagtggg ctggctgcca gacggaacgc ggaaaccgct
    12781 tgcgttaaac gactcgcctg ttcttccagc gcagcggcgg cggcagctga ttcctgcacc
    12841 agcgatgcgt tctgttgcgt gacgcgatcc atttccgaaa ccgccaatgc gacttgatcg
    12901 atgccacggc tctgttcatc cgatgccgat gcaatctcgc ccataatgtc agtcacgcga
    12961 gtgacagcat tgacgatatt gttcattgtt tccccggcgc tttcgaccag caccgaaccg
    13021 gtatcaacgc gtgagacgga gtcttcaatg agggctttga tctcttttgc cgcctgggcg
    13081 ctgcgactgg caagattacg cacttcaccc gccaccacgg caaaaccacg gccctgttca
    13141 cccgcacgcg cggcttcaac cgcggcattc agcgcgagga tattagtctg gaaggcaata
    13201 ccgtcgataa cgctgataat gtcggcaatt ttcttcgaac tatcggcgat ctcatgcatc
    13261 gttttcacta cgccatccac cactttgccg ccgtgctggg cggtgtcgga ggcactttgc
    13321 gccagttgcg aggcctggcg ggcgttatcg gcgttttgct tcactgtcgc ggtgagctgc
    13381 tccatgctgg cggcagtttc ttccagcgcg gatgcctgct gttcagtacg ggaggaaaga
    13441 tcggtgttgc ccgccgcaat ttcacgggta ccggcataga tggcatctga accttcgcgg
    13501 acatgagtga cggtgtcagt caaagagcgt tgcatatgtg aaacgctctg cgccaggtcg
    13561 cccatttcac tgcgcccgtc aatggtcagg gtattcgcca ggttaccacc ggcgatttcg
    13621 cgaatgtgag caataatttt tgccagcgga gtaagcaaca tacggcgaat gccgtaccac
    13681 gccaccagca gaatcaatac caccaccagc gcgataaccg ccagttgcca ctgggcaaat
    13741 cggtaatcat ctgcgttgtc agtgacgata tcgcgataca gtttttcact gctgagggcg
    13801 tactgagcaa acgcttcgcc cattgcattt tgcattccct gggttggctg agcgaaataa
    13861 gctccagtat tgccataatc tagataatca atcagttcag ttaacgctgt gtaatagttt
    13921 ttatattttt catcaatatt acgactggta gcgaccattt caggtaacgg tgccatgctt
    13981 ttgaattttt tataatgcgt cgctgcctgc gccaatgttt tcctggcgct atcgagcaat
    14041 tcaactttgg cgttactttg ttgattggag gaatccatca tcatccgtac cgctgaacga
    14101 ctcaggttaa tgcgcgtttg cagcattaaa tcccaggttg acgtcagctc gccctgctgt
    14161 tcccgtaatt gattggaaac cacaaagctc ttctggctat ggtgaaggga agaaaaaaac
    14221 agactgccgg aaataagctg taacagtgcg aataccccca gcaccattac caacagcgtg
    14281 actacgcgga tacggttaat cataaggcac cttcctgaaa acaagttgat ctcgttatcg
    14341 gcaagaaggg gggaaacttt attgctgatg ccacccgccg cgaaattgaa ataaaaaacc
    14401 cgatgcgcag atcatcgggt tcatttcaat tgaggaaatc gggagaatta cgccacttct
    14461 gacgccgcgc tatctaacag cgccatctct tcgctgttca gcagtttttc gatgttcacc
    14521 agaatcaaca tacggtcgcc cagtgcgccc agtccagtga gatattctgt tgaaagcgtc
    14581 acggcaaatt ctggtgccgg acgaatttgc tccgccgtca atgaaagcac gtctgaaacg
    14641 ccgtcaacca cgatgccaac cacccgttgt ccgagattca ggacgataac taccgtgttg
    14701 tcgttatagt ccacatccac ctggctgaac ttaattcgta agtcaacaat cggcacaata
    14761 accccgcgca gattcgtgac gcctttgata aacgctggcg tgttcgcaat ccgtgttacc
    14821 tgatcgtagc cacggatctc ctgcactttc aggatatcaa taccgtactc ttcatcacca
    14881 agggtaaata ccagaaattc ctggcctgac ggctcgctgg ccagctttgt tacattcgtc
    14941 ataccggtca tattgttacc tttttactca ttcaggcggc ggtgttcgcc atacgttgtt
    15001 cgcggtttat cgcctgcaag gcggagacat caacaatcag tgccacgctg ccgtcgccaa
    15061 gaatggtcgc agcagaaatg ccggggactt tgcgatagtt actttcaagg tttttaacca
    15121 caacctggtg ctgaccaatt aattgatcca ccagcaaggc gtagcggcga ccgccacttt
    15181 gtaagatcac aacaattccc tgggtggctt cggttttcgc gcccgcgacg ttgaacactt
    15241 tccacagttc gacgatgggc agatattcac cccgcacttc cagcacccgc tcgccgccgg
    15301 ccagtggatg gagatcggct tcacggggtt gcagtgattc cataacagca ttcagcggca
    15361 gaatgaaaac ttcatccgca acgcgtacgg acatgccgtc gaggatggcc aacgtcagcg
    15421 gcagtaaaat gcggatcgta gtgccagtac cctgcttcga ctggatttcg acatgaccgc
    15481 ccatctcctg gatattacgt ttaacgacat ccatgccgac gccgcgcccg gagacgtcgg
    15541 tgacctgctc tgccgtggag aagccaggtg caaatatcag catcgcgact tcgtcgtcgc
    15601 tcatgttttc gctgacagtc aaaccttgcg aggccgcttt tgccaaaatt cgctcacggt
    15661 ttagccccgc cccatcgtcg gtcacttcaa tgcaaatgtt gccgccctga tgttcggcag
    15721 acagaattaa atttccgacg ctgtttttac ctgcggcgag ccgtttttct ggcagttcaa
    15781 taccgtgatc gaggctattg cgtaccaggt gggtcagcgg gtcgataatg cgttctatca
    15841 ggctcttgtc gagctcggtg gaactgccca ccagcgtcag ttctacctgc ttgccgagtt
    15901 ttcccgccag atcacgcacc agccggggat agcgactaaa gacatattcc atcggcatca
    15961 tgcgaatcga catcactgat tcctgcaaat cacgggcgtt acgttgtaac tgccccatgc
    16021 tggtaatcaa atcaccatga ttaaccgggt ccagttcgct ggaacgctgg gcaagcatgg
    16081 actgggtgat aaccagctcg ccgacgaggt taattaattg atcaaccttt tctaccgcta
    16141 cacggatgct ggtggattca ctgctgcgcg tcgttttttc ccgctccacg cggccggttg
    16201 gcgcttgttc ggctgccagt ttaagcacag gtggggtagc tatttttggc gagacttcta
    16261 ctgtttcaaa ggtaatctga tcggcttcaa tcacaaaaca gagtaccgct gtgatgtcat
    16321 cttcggcgat gtcgcccggt aatattgccg agagcgaatc cgcccctttc accacgtcag
    16381 ttaacgttgt cagatgcccc agctcttctt ccagcaggtc gacttcgccg gccttcaggc
    16441 gcgaaaggat aattcgtcgc ggcaactgac tgcgactctg ctcatcttgc ggttcacttt
    16501 tggcaaccac acttaatcgg gtcactgcgg atggcgtttc acctttcgct tctaatgcca
    16561 gttgacgcaa ggcctggcag atataatcga agctggcggc atccggctct tgcgactgtt
    16621 tataagcgtc gagctgttct tgcatgatgt ccttcgtttc caaaaacaga ttgataatgt
    16681 cggtgttgag ttgcatctca cctcgtctgg cttcatcgag caggttttcc atcagatgcg
    16741 tggtttcctg caaaacgctg aagccaaaag ttcctgcccc tcctttgatc gagtgggcag
    16801 cccgaaagat ggcattcaat tgttcggcat ctggcgcttc cggctgcaaa accagcagat
    16861 gctgctccat atcagccaac agttcgtccg cttcatcaaa aaatgtctga taaaaatcgc
    16921 ttatatccat gctcacgctg tcacctcggt tcggctgatg gcattgtggg aacactgacc
    16981 tgtggtgcaa cctcaggttt ttccagggcg cttactggct cattctggct ttcggcgttt
    17041 tcatgcaaaa tggcctgttc ggcttgtttg ttcagtacca gcaggctgat gcgacggttg
    17101 acggcatcat caggtccgcg atcgcttaag cgcatcgttg ccgccatgcc gacgacacgt
    17161 aacactttgc cgctatccaa ccctccgacc atcagttcgc ggcgggatgc attggcccga
    17221 tcggcagaaa gctcccagtt gctgtaacct ttctcaccac tggcgtatgg gaaatcatcg
    17281 gtatgacccg aaaggctaat acggttggga ataccattca gaacgggcgc gatggcgcgc
    17341 agaatgtcgc gcatataggg ttcgacatcg gcactgccgg ttttaaacat cgggcgattc
    17401 tggctatcga tgatctgaat acgtagacct tcctggacca gatcgatttt gagatgtgga
    17461 cgtaacgccc gcagtttcgg atcggactct atcaactggt cgagatcacc ccgcaatttc
    17521 cgcaatcgac tttgctccat gcgttttttc aactcttcga tgttcggctg cttattcact
    17581 tccccctggc tttgggtgta atcatcacca ccgccgggaa ttgggctttc actattagaa
    17641 atgcgatcgc cgcccgtaac cgcagtcgcc agtggagtcc ggaagtactc cgcaatctga
    17701 atcagctctt ttgggctgga gatggagatc agccacatca ccagaaaaaa ggccatcatc
    17761 gcagtcataa agtcggcata agcaatcttc cacgatccat gtgctgcccc gtggcttttg
    17821 gctttgcgtc gtttgacgac aataatcgga tgcgcttgat tcttcatgct tcctcggttg
    17881 tcgtctgttg ttgcggattt ttcaccgcac gcacatgctc ttccagttca ataaacgacg
    17941 gacgttcgct ggaatagagc gttttgcgac caaactcaac ggcgataggc ggtgcgtaac
    18001 cgttcagatt agaaagcaga gtgactttga cgcactgcat cattttgctg gtttcggcgc
    18061 ttttctgacg taaaacagtc gctaatgggg aaataaatcc gtaagccaat aaaatgccga
    18121 ggaaagtccc caccatcgca tgtgcgataa gcgcacccag ctcggcggca ggacgatcgg
    18181 ctgaacctaa cgcgtgaacg acccccatta cagccgcaac aataccaaac gccggaagtg
    18241 agtccccgac cagcgccaga ctgttcgccg ggacttctgc ctcgctttcg tgcgtctcaa
    18301 tctcttcatc catcagggct tcgatttcga aggtgttcat gtgaccgctg ataatcaggc
    18361 gcagataatc gacgataaaa tcaagcatga cgctatccgc gaggatgcgt gggtagctgg
    18421 cgaagatctc gctctcacgg ggattttcaa tatcacgttc cagcgaaaac atccccatct
    18481 gccgcgattt cgccatcaac cgataaagca gagccagcag atccatatac attgctttgg
    18541 tgtatttgga gcgacgaaac agcaacggca gcgccttcag cgtgccttta atcgctttgc
    18601 cattattgcc gacgataaac gacccaatcc ctgcaccggc aataatcacc agttcagcgg
    18661 gttgatagag tgctccaagg cttccaccgg tcatcaaata accgccgaaa actgtaccga
    18721 gaacaaccag gtaacctaat aagataagca cgacatcatc cttccactgt tgaccatgac
    18781 aggatgttca gtcgtcaggc gttaacgcgc gattggggca aaaaaaagca gcggtacgtc
    18841 gttaccgctg ctggaatgtt gcgcctcacc gtatcagtta aacagcctgt actctctgtt
    18901 catccagcag ttgtgggata atatcggcag gattctggga aagtttacgt ctttttactg
    18961 cccgggatgg cggttgacat aagctgcagg caaagctgcc aacaggctgg tgagcgtggg
    19021 taataaaatt gccgccgcag cagttgcagc tggaaagttg cagtaatcca ctttcaacaa
    19081 accgcaccaa tgtccaggca cgggttaatg ccagcagtgg tccttcttct gcttgtgggc
    19141 actgttcaag gtataaacgg taggctttga tcaccgcatc gacgccatta cacaaaccgg
    19201 ttttcagtaa aaactgccat gcattacaga acatcgaagc atgaacgttt tgttcccagg
    19261 tcataaacca gtcggttgag aatggcagca tgcctttcgg cggtgggctt ccgcgcagtt
    19321 ctttataaag ttttatcagg cgtccgcgac ttaactgtgt ttcgctttcc agcatctgca
    19381 aacgagcgcc cagggtgatc aattccattg ccagctgaat atcccgcgct tcctgaacaa
    19441 tgcttttttc actcatgatc aggccctttt cttgcgcagc gcttcttcag gctgattaac
    19501 atcattcagc aagcgtgttg agagcatgat gccggtatga atttgctgga gatcgtcaac
    19561 gcgggaatct tgcgtcaact gagtaatcgt ctggtggctg tcaaaacgga agtgacaaac
    19621 cagttgattg gtttctgcca gcttaaccat ttgcggaaga gtcagtgccg ctaacgttgt
    19681 cgccatttct tcatttatgc cgagacgaaa catagcggac gctttgtcct gaacaatcaa
    19741 acgctgtgca agtagtaaat atgacaagtt gatgtcataa atgtgtttca gcaactcgga
    19801 ggtatgcatt attcccaccc agaataacca actttatttt tatgcggttt caccgcaccc
    19861 cgtgatgtcg ccgggaagcc ccggtaaaaa ataattagca ttagaatagt tgcgataagc
    19921 tgcaataagc agaaccacct ttttggttta atatgtcctt acaaatagaa atgggtcttt
    19981 acacttatct aagatttttc ctaaatcgac gcaactgtac tcgtcactac acgcacatac
    20041 aacggagggg ggctgcgatt ttcaataatg tgtgatgcag atcata
//
LOCUS       DAPGWB010000080        19681 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.080, whole genome shotgun sequence.
ACCESSION   DAPGWB010000080 DAPGWB010000000
VERSION     DAPGWB010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 19681)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19681)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19681
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.080"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(224..1495)
                     /gene="efeB"
                     /locus_tag="RHX79_002749"
     CDS             complement(224..1495)
                     /gene="efeB"
                     /locus_tag="RHX79_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HDV2197902.1"
                     /translation="MQYEDKNGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGT
                     LSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLT
                     QGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM
                     TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHA
                     ARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTAGQQEPAWTIGGSYQAVRLIQ
                     FRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKVIALDSHIRLAN
                     PRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALE
                     EYVKPIGGGYFFALPGVKDANDYLGSALLRV"
     gene            complement(1501..2628)
                     /gene="efeO"
                     /locus_tag="RHX79_002750"
     CDS             complement(1501..2628)
                     /gene="efeO"
                     /locus_tag="RHX79_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HDV2197903.1"
                     /translation="MTINFRRNALQLSVAALFSSAFMANAADVTQVKVTVTDKQCEPM
                     TITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMT
                     CGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDA
                     IKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHR
                     LEKALFGDNTTKGMDQYADQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKI
                     SGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKY
                     RTKDGFETYDKLTDADRNALKGPITALAEDLAQLRGVLGLD"
     gene            complement(2686..3516)
                     /locus_tag="RHX79_002751"
     CDS             complement(2686..3516)
                     /locus_tag="RHX79_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HDV2197904.1"
                     /translation="MFVPFLIMLREGLEAALIVSLIASYLKRTQRGRWIGVMWIGVLL
                     AAALCLGLGIFINETTGEFPQKEQELFEGIVAVIAVVILTWMVFWMRKVSRNVKVQLE
                     QAVDSALQRGNHHGWALVMMVFFAVAREGLESVFFLLAAFQQDVGIWPPLGAMLGLAT
                     AVVLGFLLYWGGIRLNLGAFFKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQEIAFD
                     MSAVLSTHSLFGTLMEGIFGYQEAPSVSEVAVWFIYLIPALVAFALPPRAGATASRSA
                     "
     gene            complement(4058..5566)
                     /gene="putP"
                     /locus_tag="RHX79_002752"
     CDS             complement(4058..5566)
                     /gene="putP"
                     /locus_tag="RHX79_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDV2197905.1"
                     /translation="MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGP
                     FVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE
                     YNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY
                     ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEV
                     IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMT
                     WMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQILFNPWIAGILLSAI
                     LAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAAN
                     PENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWL
                     GLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES"
     gene            complement(5725..5934)
                     /locus_tag="RHX79_002753"
     CDS             complement(5725..5934)
                     /locus_tag="RHX79_002753"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197906.1"
                     /translation="MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQ
                     LTFLKGATAKNVRECNLMKNSVAEH"
     gene            5989..9951
                     /gene="putA"
                     /locus_tag="RHX79_002754"
     CDS             5989..9951
                     /gene="putA"
                     /locus_tag="RHX79_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional transcriptional regulator/proline
                     dehydrogenase/L-glutamate gamma-semialdehyde
                     dehydrogenase"
                     /protein_id="HDV2197907.1"
                     /translation="MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQL
                     ENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRP
                     ETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQ
                     EGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGK
                     LVSTHNEAILSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLE
                     EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH
                     PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPE
                     LAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGL
                     EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQY
                     EFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSF
                     VNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDL
                     ANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPR
                     EVEQALESAVNNAPIWFATPPVERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAI
                     AEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS
                     VLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGS
                     TEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAG
                     QRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHI
                     QTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYN
                     RNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPF
                     GGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNAL
                     REWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDAL
                     TQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVTFHGDS
                     DQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
                     "
     gene            complement(9991..10629)
                     /gene="rutR"
                     /locus_tag="RHX79_002755"
     CDS             complement(9991..10629)
                     /gene="rutR"
                     /locus_tag="RHX79_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator RutR"
                     /protein_id="HDV2197908.1"
                     /translation="MTQGAVKTTGKRSRTVSAKKKAILSAALDTFSQFGFHGTRLEQI
                     AELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKL
                     EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSSKLAPIDPQ
                     HLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR"
     gene            10917..12008
                     /gene="rutA"
                     /locus_tag="RHX79_002756"
     CDS             10917..12008
                     /gene="rutA"
                     /locus_tag="RHX79_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309285.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein A"
                     /protein_id="HDV2197909.1"
                     /translation="MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDF
                     ALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAA
                     TIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGSGKS
                     DFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFA
                     PTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQ
                     KDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDF
                     LSGIETFGERIQPLMQCRAHLPALTQEVA"
     gene            12008..12700
                     /gene="rutB"
                     /locus_tag="RHX79_002757"
     CDS             12008..12700
                     /gene="rutB"
                     /locus_tag="RHX79_002757"
                     /EC_number="3.5.1.110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415531.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxyureidoacrylate/ureidoacrylate
                     amidohydrolase RutB"
                     /protein_id="HDV2197910.1"
                     /translation="MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVS
                     TTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQP
                     QLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTG
                     IATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFC
                     DALSPTSFAHIA"
     gene            12712..13098
                     /gene="rutC"
                     /locus_tag="RHX79_002758"
     CDS             12712..13098
                     /gene="rutC"
                     /locus_tag="RHX79_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein C"
                     /protein_id="HDV2197911.1"
                     /translation="MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLF
                     ADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKP
                     ARFCIQCGLVKPDALVEIATIAHIAK"
     gene            13106..13906
                     /gene="rutD"
                     /locus_tag="RHX79_002759"
     CDS             13106..13906
                     /gene="rutD"
                     /locus_tag="RHX79_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein D"
                     /protein_id="HDV2197912.1"
                     /translation="MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVC
                     YDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYP
                     ASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPR
                     LEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPSACSS
                     ELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL"
     gene            13916..14506
                     /locus_tag="RHX79_002760"
     CDS             13916..14506
                     /locus_tag="RHX79_002760"
                     /EC_number="1.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonic semialdehyde reductase"
                     /protein_id="HDV2197913.1"
                     /translation="MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGP
                     TSANCSPARIVFIRTVEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFP
                     HGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQYVDDAFFA
                     GSTLKSNLLINIGYGDSSKLYARLPRLSFEEACGLL"
     gene            14517..15011
                     /gene="rutF"
                     /locus_tag="RHX79_002761"
     CDS             14517..15011
                     /gene="rutF"
                     /locus_tag="RHX79_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309280.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization flavin reductase protein
                     F"
                     /protein_id="HDV2197914.1"
                     /translation="MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTD
                     TPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQT
                     GVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALM
                     RPAC"
     gene            15032..16360
                     /gene="rutG"
                     /locus_tag="RHX79_002762"
     CDS             15032..16360
                     /gene="rutG"
                     /locus_tag="RHX79_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415526.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization transport protein G"
                     /protein_id="HDV2197915.1"
                     /translation="MAMFGFPHWQLKSTSIESGVVAPDERLPFAQTAVMGVQHAVAMF
                     GATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNG
                     QGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAP
                     IAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLG
                     LGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGR
                     NMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAML
                     LGFSPKFGALIHTIPAPVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTL
                     VLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP"
     gene            complement(16443..16616)
                     /locus_tag="RHX79_002763"
     CDS             complement(16443..16616)
                     /locus_tag="RHX79_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415525.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HDV2197916.1"
                     /translation="MANHRGGSGNFAEDRERASEAGKKGGQHSGGNFKNDPQRASEAG
                     KKGGKSSHGKSDN"
     gene            16989..17585
                     /gene="wrbA"
                     /locus_tag="RHX79_002764"
     CDS             16989..17585
                     /gene="wrbA"
                     /locus_tag="RHX79_002764"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HDV2197917.1"
                     /translation="MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMP
                     PQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGA
                     LYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPY
                     GATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG"
     gene            17606..17833
                     /locus_tag="RHX79_002765"
     CDS             17606..17833
                     /locus_tag="RHX79_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002898701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccJ family protein"
                     /protein_id="HDV2197918.1"
                     /translation="MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWE
                     EGSDEVLVKAFAKTDKDSLFWGEQTIERKNV"
     gene            complement(17871..19112)
                     /gene="agp"
                     /locus_tag="RHX79_002766"
     CDS             complement(17871..19112)
                     /gene="agp"
                     /locus_tag="RHX79_002766"
                     /EC_number="3.1.3.10"
                     /EC_number="3.1.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glucose-1-phosphatase/inositol
                     phosphatase"
                     /protein_id="HDV2197919.1"
                     /translation="MNKTLIAAAVAGIVLIASNAQAQTVPEGYQLQQVLMMSRHNLRA
                     PLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECP
                     PPDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAF
                     SEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQE
                     PGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTS
                     PEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNE
                     RTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCP
                     IDANGFCPMDKFDSVLNEAVK"
     gene            complement(19401..>19681)
                     /locus_tag="RHX79_002767"
     CDS             complement(19401..>19681)
                     /locus_tag="RHX79_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000097604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197920.1"
                     /translation="TDPEQRVNEVKNFLTALSDSICSLFIVNSNMASISLGNESFSTD
                     EDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKERNAQLDYLNRYAIY"
BASE COUNT         4596 a         5297 c         5130 g         4658 t
ORIGIN      
        1 tttcagtgac attagtttct actggaaaga tgacagagtg atgacagata tgaaaaaagc
       61 tgtgtgcttt cagcaggatt tgcatcaggc atcagtgcac gatcgccgta tgcggcgtga
      121 acgccttatc cgcctaccga acccgcaccg attgtaggca taagaagacg cgcaagcatc
      181 gcatcaggca tctgcgcaag aacgccttat ccgtctaaaa acattaaacc cgcaataacg
      241 cgcttccgag ataatcgttc gcgtccttca ctcccggcag cgcaaaaaaa taaccgccgc
      301 cgataggttt aacgtattcc tccagcgctt cgccattgag ccttttttgt actgtcagga
      361 agcctttttc cagatcgtgt tggtaacaga caaacagtag ccccatatcc agttgcccgg
      421 agttggtgac gcccagtgaa taactgtagc cacgacgcag catcaggctg gactcactct
      481 ccgccgtgcg gggattcgcc agccggatat ggctgtccag cgcaatcacc ttcccttccg
      541 gatcgctggc gtaatcggga acatcatgct catgctgcat tcccagcggc gcaccggttt
      601 gcttatcacg accaaaaatc gtctgctgtt ctttcagcgg agttctgtcc caaaattcca
      661 ctcgaaactg aatcaagcgt actgcctgat agctgccacc gattgtccac gctggctcct
      721 gctgacctgc cgttacccac accacttttt gcatcaactt atcattctgg ctatcgggat
      781 tggcagtgcc gtctttgaaa cccagcaaat taatcggcgt ctctttgcct ttactacgcg
      841 ccgcgtgatc ggaaataaac ccttcccgct tccagcgcac gctgagcaaa tccggcgtat
      901 gtttgatgat atcgcgcagt gcatggatca ccgtgtcctg ggtgttggcg caaatttgta
      961 gcaacacatc accatgacat aacgccgcat ccagcgagtc gttgggaaaa cgcgtcatct
     1021 tctgcaactt tttcggcatc tgtggcgcaa ggccaaagcg ctcatcaaac aatgagtgac
     1081 ccaccgataa cgtgatggtg agattatcgg gcgcaatgta gccgccaaga atgccggaat
     1141 cgagtggtgg caggcgcgga tttggcgttt ctggtgccgc tccgccctga gtcagaaaag
     1201 caaaacgctg agtcaacaag cgaaacaacc gttcaagatc ggctttatcg ctggcaagca
     1261 catcaaacgc caccagcatc attgcggcct gttgtggcgt caggatccct gcctgatgct
     1321 caccataaaa cggctgtttc tcattgcgtg catccggtga aagcgtaccc ggcgcacttt
     1381 gcgttttttg tgcatgagcg accggacaac ttcccgccag cgccagcgca ccaatgcctt
     1441 tcagtaaacg tcggcgtgac ggttcattca cgccgttttt atcttcatac tgcataatgc
     1501 ttaatccaat cccagcacac cgcgaagttg cgccagatct tccgccagcg cagtaatcgg
     1561 tcctttcagt gcattccggt cggcatcggt caatttgtcg taggtttcaa aaccgtcttt
     1621 agtacggtat ttcgccagaa tggtatcgac ctttttaaag ttggcatcga cttttgccaa
     1681 cagttccggg ttggcttttt gcagttgtgg acgcagcaga tcgacaattt tctgcgagcc
     1741 ttcaacgtta gcctggaaat cccacagatc ggtgtggctg tagcgatctt cttcaccgct
     1801 gattttgctg gctgccactt cctcaatcag tccggctgca ccgccgacca cttttgaagg
     1861 tgggaaagcc agttcactga tgcgtttttg caaatcgacc acatcggtat aaagctggtc
     1921 agcgtactga tccatgcctt tggtggtgtt gtcgccaaac aatgcttttt ccagacggtg
     1981 gaaaccggtg aattttggat cagcggcttt ttgctcgtaa tcatcttcac gggcgtcaat
     2041 gctgccatcc agatcggaga acagttcagc aatcggttca atgcgctcat agtgctggcg
     2101 cgtcggcgca tacagtgctt tcgctttttc gatatcgcct gctttaatcg cgtcggtaaa
     2161 ggctttggtg tcggtcacca gctgcgtggt ttccgccatg acatacgctt tatatgcagt
     2221 aattgcacca ccaagactta acagcgcatc actttgcgcc gcatccgccg ttgcctcacc
     2281 tttgacgatc aacttccctt tcgggttagt cagcagaccg caggtcatat cgtattcgcc
     2341 aggctgtaaa ttcgccgtca ttttctggct aaaaccaggg gcgatatttt cccgctcttc
     2401 caccaccatc acgcctttga ggatctccca ctccagcgcc ttctggctat ggttctgaat
     2461 aatgaactgt gttttcccgg cgttaaccgt aatggtcatc ggttcgcact gcttatccgt
     2521 cacggtcact ttgacctgcg tcacatcagc ggcgttagcc ataaaagcag aagaaaacag
     2581 cgcagccacg ctcaactgca atgcgttacg gcggaagtta atggtcatga cgagactatc
     2641 cctttaaagt atgttgtaac taagcaagag tttgcgtcgt atttgttacg cggagcgaga
     2701 cgctgtcgcc cctgcgcgtg gtggcagagc aaatgccacc agcgccggga tgagataaat
     2761 aaaccagacg gcgacttcgc tgacgctcgg cgcttcctga tagccaaaaa tcccttccat
     2821 cagcgtgcca aacagcgagt gagttgagag caccgcactc atatcgaagg cgatttcctg
     2881 aaagtggttc cacaatccgg cttcatgaaa tgcgcgaatg gcaccagctg ccagccctgc
     2941 ggcgacgaag agaataaaca ggctggtcca tttaaaaaat gcaccaagat tgaggcgaat
     3001 accgccccag tagagcagga agcctagcac cacggcagta gcaagaccga gcattgcacc
     3061 cagcggcggc cagatcccga catcttgttg aaatgccgcc agcaggaaaa agaccgactc
     3121 cagcccttcc cttgcaacgg caaaaaagac catcatcacc agcgcccagc catgatgatt
     3181 tccacgctgc aatgcgctat cgactgcctg ctccagttgt actttgacgt tgcgcgacac
     3241 tttgcgcatc cagaaaacca tccaggtaag gatcaccacg gcgatcaccg ccacgatacc
     3301 ttcaaacagt tcctgctctt tttgcggaaa ttcgccggtg gtttcgttaa tgaagatccc
     3361 caagcccagg cacaacgcag cggcaagcaa cacgccaatc cacatcacac caatccatcg
     3421 gcctcgctgg gtacgcttaa gatagctggc aatcaaactg acaatcagcg cggcttcaag
     3481 tccttcgcgc aacataatga gaaacggaac aaacatgcca cccaccctta aacgtttttc
     3541 tgagtcaatc tatgcaaaga aaagtaaatc gcagtgatag cgattatcat tacggtaaag
     3601 aaaaatacaa gcggaatgtt tataaaatga tgttgaaatg taaacaaaga gaggtaatgc
     3661 caagggatat aaacgattat tccaggtaca aagatgggat tgtttacaac gagccatgtg
     3721 ttcttgccgg atgccgcgta aacgccgtat ccagccgaca aaactgtcca gactcaatgc
     3781 atcagagctt ccatgtaaaa ctgataagcg ggtgtatcaa gcaatttcgt ccatccgcga
     3841 ttatcaaatc taactttttg cccggaacat aataacagct cgggtgttgg tggcgtcaaa
     3901 atcgctgaag cgttccccga aggccgggac agcagggggc ggcggcgatt ggccgccccc
     3961 tgcgcgctcc ctgcaccatt caatttatat ggcgaggcac attaagggag cgcaacccgc
     4021 tgctgaagcc aaacaaaacc gccgcaggct aagtccctta gctttcctgc aaccgtgacg
     4081 gcggagccga atgatagtgc gcatcggcct cggcaaagcg tttttgcatc gccgctgacg
     4141 gcgctttacc cagcaaacta aacactacaa tcccgatact gccgaagatg aagcccggaa
     4201 taatttcgta gagtcccagc cagccgaact gcttccagac gataaccgtc agcgcaccga
     4261 tgatcatccc cgccagcgca ccgttgcgcg tcatgcgtga ccacatcacc gagaacagca
     4321 ccaccggacc aaacgccgcg ccaaagcctg cccacgcgta gctcactaag cccagcacgc
     4381 ggttttccgg gtttgccgcc agcgcaatcg ccaccagcgc caccaccagc accatcacac
     4441 gccctaccca caccagctct ttctggctgg catgtttacg cagaaacgct ttgtataaat
     4501 cttcggtaat cgcactggag cacaccagca gctggcagct taacgttgac attaccgccg
     4561 ccagaattgc cgacagcaga atcccggcaa tccacgggtt aaacagaatt tgcgccagtt
     4621 cgataaacac gcgctcggcg ttctggttta ccgcgcctgc taccgccggg tgctcattaa
     4681 agtaagcaat cccaaagaag ccgacagcca ccgcccctgc caggcagagg atcatccagg
     4741 tcatactgat acgacgcgca tggacaatgc tgtggtgaga atccgccgcc ataaaacgcg
     4801 ccagaatgtg cggctgcccg aagtaaccca gcccccaacc catcagtgag ataatggcga
     4861 caaagttcag ccctttgagc atatcaacgt tttcgatgct cttttgtttg atcacttcca
     4921 gcgagtcacc aaagccaccg acactgataa tgacgataac cggcgtcagg atcagggcaa
     4981 aaatcatcag gctggcctgt acagtgtcag tccagctcac cgcgaggaaa ccgccaataa
     5041 aggtgtaaag gatcgtcgcc gcagctcccg cccacagagc cgtttcgtag ctcatgccaa
     5101 aggtactttc aaacagacgc gcgcctgcca caatgcccga agcgcaataa atggtgaaga
     5161 acagcaaaat caccagcgcg gagataatgc gcaaaatgcg gcttttatct tcaaagcgcc
     5221 cggtgaaata atccggcaat gttaaggcgt tattgttgta ttcggtatgc acacgcaacc
     5281 gccccgccac cagcttccag ttgatccacg cgcctaatgt caggccaatg gcgatccaac
     5341 tttcggaaat cccggaaaga aaaaccgcgc ccggcaaccc cattaacagc cagccgctca
     5401 tatccgacgc acccgccgat aatgccgtca cgaatggccc aaggctacga ccgcccagaa
     5461 tatagtcgtc aaagtttttc gttgatcgcc aggcgataaa cccaatcaat atcatgccaa
     5521 agatatagac acaaaatgtc accaacatcg gtgtgctaat agccatctaa agtctccaaa
     5581 aaattattat cggcaatgtc gaaacttgcc gttatatctg ccaccggaac ggggtaacag
     5641 agtttatgtt ttaccagggc gaccgtatcc tgccggaagc gctggttatt cacaatcgat
     5701 ttaacacacc atttacatta aattttagtg ctcagcgaca ctatttttca tcaggttgca
     5761 ctctctcaca ttttttgcgg ttgcaccttt caaaaatgtt aactgccgca gagaaaaagt
     5821 ctgagttatt tttttaatcc ctgtcatatc gatttctttt attaacattt cattcatttt
     5881 taagcttgct acgcatgtca catttaacat ggttgcacaa agttgcaaca tcatggatat
     5941 ttcacgataa cgttaagttg cacctttcag aacaacagga gtaatggcat gggaaccacc
     6001 accatggggg ttaagctgga cgacgcgacg cgtgagcgta ttaagtctgc cgcgacacgt
     6061 atcgatcgca cgccacactg gttaattaag caggcgattt tttcttatct cgaacaactg
     6121 gaaaacagcg atactctgcc ggagctacct gcgctgcttt ctggcgctgc caatgagagc
     6181 gatgaagcac cgactccggc agaggaacca caccagccat tcctcgactt tgccgagcaa
     6241 attttgcccc agtcggtttc ccgcgccgcg atcacagcgg cctatcgccg cccggaaacc
     6301 gaagcggttt ctatgctgct ggaacaagcc cgcctgccgc agccagttgc tgaacaggcg
     6361 cacaaactgg cgtatcaact ggccgataaa ctgcgtaatc aaaaaaacgc cagtggtcgc
     6421 gcaggtatgg ttcaggggtt attgcaggag ttttcgttgt catcgcagga aggcgtggcg
     6481 ctgatgtgtc tggcggaagc gttgttgcgt attcccgaca aagccacccg tgatgcgtta
     6541 attcgcgaca aaatcagcaa cggtaactgg cagtcacaca ttggtcgtag cccgtcactg
     6601 tttgttaatg ccgccacctg ggggctgctg tttactggca aactggtttc cacccataac
     6661 gaagccatcc tctcccgctc gctgaaccgc attatcggta aaagcggtga accgctgatc
     6721 cgcaaaggtg tggatatggc gatgcgcctg atgggcgagc agttcgtcac gggtgaaacc
     6781 atcgcggaag cgttagccaa tgcccgcaag ctggaagaga aaggtttccg ttactcttac
     6841 gatatgctgg gcgaagctgc actgactgcc gcagacgcac aggcgtatat ggtttcctat
     6901 cagcaggcga ttcacgccat cggtaaagcg tctaacggtc gtggcatcta tgaagggccg
     6961 ggcatttcaa tcaaactgtc ggcgctgcat ccgcgttata gccgcgccca gtatgaccgg
     7021 gtaatggaag aactttaccc gcgtctgaaa tcactcaccc tgctggcgcg tcagtatgat
     7081 attggtatta acatcgatgc cgaagaggcc gatcgtctgg agatctccct cgatctgctg
     7141 gaaaaactct gtttcgagcc ggaactggca ggctggaacg gcatcggttt tgttattcag
     7201 gcttatcaaa aacgctgccc gttggtgatt gattacctga ttgatctcgc cacccgtagc
     7261 cgtcgccgtc tgatgattcg tctggtgaaa ggcgcgtact gggatagtga aattaagcgt
     7321 gcgcagatgg acggccttga aggttatccg gtttataccc gcaaggtgta taccgacgtt
     7381 tcttatctcg cctgtgcgaa aaaactgctg gcggtgccga atctaatcta cccgcagttc
     7441 gcgacgcaca acgcccatac gctggcagcg atttatcaac tggcaggtca gaactactat
     7501 ccgggtcagt acgagttcca gtgcctgcat ggtatgggcg agccactgta cgagcaggtc
     7561 accgggaaag ttgccgacgg taaacttaac cgaccgtgtc gtatttatgc cccggttggc
     7621 acacatgaaa cgctgctggc gtatctggtg cgtcgcctgc tggaaaacgg tgctaacacc
     7681 tcgtttgtta accgtattgc cgacacctct ttgccactgg atgaactggt cgccgatccg
     7741 gtcactgctg tagaaaaact ggcgcaacag gaagggcaaa ctggattacc gcatccgaaa
     7801 attcccctgc cgcgcgatct ttacggtcac gggcgcgaca actcggcagg gctggatctc
     7861 gctaacgaac accgtctggc ctcgctctcc tctgccctgc tcaatagtgc actgcaaaaa
     7921 tggcaggcct tgccaatgct ggaacaaccg gtagcggcag gtgagatgtc gcccgttatt
     7981 aaccctgcgg aaccgaaaga tattgtgggc tatgtgcgtg aagccacgcc gcgtgaggta
     8041 gaacaggcgc tggaaagtgc ggttaataac gcgccaatct ggtttgccac tcctccggtt
     8101 gaacgcgcgg cgattttgca tcgcgctgcc gtgctaatgg aaagccagat gcagcaactg
     8161 attggtattc tggtgcgtga agccggaaaa accttcagta acgccattgc cgaagtgcgc
     8221 gaagcggtcg attttctcca ctactatgcc ggacaggtgc gggatgattt cgctaacgaa
     8281 acccaccgtc cattagggcc tgtggtgtgt atcagtccgt ggaacttccc gctggctatt
     8341 ttcaccgggc agattgctgc cgcactggcg gcaggtaaca gcgtgctggc aaaaccggca
     8401 gaacaaacgc cgctgattgc cgcgcaaggg atcgccattt tgctggaagc gggtgtaccg
     8461 ccaggcgtgg tgcagttgct gccaggtcag ggggaaaccg tgggcgcgca actgacgggt
     8521 gatgatcgcg tgcgcggggt gatgtttacc ggttcaaccg aagtcgctac gttactgcag
     8581 cgcaatatcg ccagccgcct ggacgctcag ggtcgcccta ttccgctcat cgctgaaacc
     8641 ggcggcatga acgcgatgat tgtcgattct tcagcactga ccgaacaggt cgtcgtggat
     8701 gtactggcct cggcgttcga cagtgcgggt cagcgttgtt cggcgctgcg cgtgctgtgc
     8761 ctgcaagatg agattgccga ccacacgttg aaaatgctgc gcggcgcaat ggccgaatgc
     8821 cggatgggta atccgggtcg cctgaccacc gatatcggtc cggtgattga tagcgaagcg
     8881 aaagccaata ttgagcgcca tattcagacc atgcgtagca aaggccgtcc ggtgttccag
     8941 gcggtgcggg aaaacagcga agatgcccgt gaatggcaaa gcggcacctt tgtcgccccg
     9001 acgctgatcg aactggatga ctttgccgaa ttgcaaaaag aggtctttgg tccggtgctg
     9061 catgtggtgc gttacaaccg taaccagcta ccagagctga tcgagcagat taacgcttcc
     9121 ggctatggtc tgacgcttgg tgtccatacg cgtattgatg aaaccatcgc ccaggtcact
     9181 ggctcggccc atgttggtaa cctgtatgtt aaccgtaata tggtgggcgc agtggtgggt
     9241 gtgcagccat tcggcggcga agggttgtcc ggtaccgggc cgaaagcagg cggtccgctc
     9301 tatctctacc gtctgctggc gaatcgcccg gaaagtgcgc tggcagtgac gctcgcgcgt
     9361 caggatgcag agtatccggt cgatgcacag ttgaaagccg cattgactca gccgctaaat
     9421 gcactgcggg aatgggcagc aaatcgtcca gaattgcagg cgttatgtac gcaatatggc
     9481 gagctggcgc aggcaggaac acaacgattg ctgccggggc cgacgggtga acgcaacacc
     9541 tggacgctgc tgccgcgtga gcgcgtgttg tgtattgccg atgatgagca ggatgcgctg
     9601 actcagctcg ccgccgtgct ggcggtgggc agccaggtac tgtggccgga tgacgcgctg
     9661 catcgtcagc tagtaaaggc attgccatcg gcagtcagcg aacgtattca actggcgaaa
     9721 gcggaaaata taaccgctca accctttgat gcggtgacct tccacggtga ttcggatcag
     9781 cttcgcgcat tgtgtgaagc cgttgctgcg cgggatggcg caattgtttc ggtgcagggt
     9841 tttgcccgtg gcgaaagcaa tatccttctg gaacggctgt atatcgagcg ttcgctgagt
     9901 gtgaataccg ctgccgctgg cggtaacgcc agcttaatga ctataggtta aacaggtagc
     9961 cggaggatgt tacaacctcc tccggcatct ttaacgtggt cgaatcccct caataataat
    10021 ccgctgcacg ttttcaaccg tttgattgaa aaatacctca tcgcgcaacg tcgcgcctgt
    10081 caccgcctcc acctgagggg cgaaatcggc gtaatgttga gtggaagccc aaatcataaa
    10141 aatcaaatgc tgcggatcaa tcggcgcgag tttgctgctt ttgacccaac cggcaatcag
    10201 cgccgatttc tcatcaatta atgccttcaa atcgcccgtc agttcatcca ttaacaacgg
    10261 cgcgcctgcc agcatctcca tacagaacag gcgcgaagcc tgcggataat cgcgtgagac
    10321 ttccagcttc agacggatgt actctttgat cgccgccagc ggggcgaaat cttcacgaaa
    10381 cgcttttaac ggtgccagcc agatatcgag aatctgccgc agcacggcaa tatacagcgc
    10441 ctcttttgac ggaaagtaat acagcagatt ggtttttgaa acacccgcca actctgcgat
    10501 ctgctccagc cttgtgccgt gaaaaccgaa ttgtgaaaaa gtgtccagtg ctgcgctaag
    10561 aatcgctttt ttcttcgcgc ttactgtacg cgaacgttta cccgttgttt tgactgcgcc
    10621 ttgcgtcatg cgctctcccc tcttgtagat tggcaacagg atagcaaaac ccccgtccgg
    10681 cctcgacctt ctgcactctc atcgcgcacg gatgcatgtt ttatgtgcaa ctgttttgac
    10741 cgtttagtcc actttttacc agatatttta gataacttag cattaacaca ttaataacat
    10801 tcacttttta aaaactggca tccactttgc aaacaagcca ttacgcggct gaaaaggata
    10861 tgcaggacgc agtgccccgt ctgactttca ctttacgaga cgaagagagg ttgatgatga
    10921 aaattggcgt attcgtacct attggcaaca acggctggct catttcgacc cacgcgccgc
    10981 agtacatgcc gacctttgaa ctgaataaag ccattgtgca aaaagcggag cactaccatt
    11041 tcgatttcgc cctgtcgatg atcaaactgc gtggctttgg cggcaaaact gagttctggg
    11101 atcacaacct tgagtcgttc accttgatgg cggggctggc agccgtcacc tcacgcattc
    11161 agatttacgc gacagctgcc accttaacgt tacctccggc aatcgtcgcc cgtatggccg
    11221 caaccattga ctccatctct ggcgggcgtt ttggcgtcaa cctcgtgact ggctggcaaa
    11281 agcccgagta tgagcagatg ggtatctggc ctggcgatga ctatttctcc cgtcgttacg
    11341 actatctcac cgaatatgtt caggtgctgc gcgacctgtg gggctcgggg aaaagcgatt
    11401 ttaaaggcga ttttttcacc atgaatgatt gtcgcgtcag tccgcaaccg agtgtaccca
    11461 tgaaagtgat ctgcgccggg caaagcgacg ctggcatggc gttctccgcc cagtatgccg
    11521 atttcaactt ctgtttcggc aaaggcgtaa atacacccac ggctttcgcc ccgaccgctg
    11581 cgcggatgaa acaggccgca gagcaaaccg ggcgcgacgt tggctcttat gtattgttta
    11641 tggtgattgc cgatgaaacc gacgatgccg ctcgcgccaa atgggaacac tacaaagcgg
    11701 gcgcggatga agaggcgtta agctggctaa ccgaacaaag tcagaaagat acccgctccg
    11761 gtactgacac caacgtccgt cagatggccg atcccacttc ggcggtaaac atcaatatgg
    11821 ggacgttagt cggttcttac gccagtgtcg cgcgcatgtt agatgaagtc gcaagcgtgc
    11881 ctggtgccga aggcgtgctg ttgaccttcg atgattttct gtcgggaatc gaaaccttcg
    11941 gcgagcgcat tcaaccactg atgcagtgcc gcgcccatct ccctgcgctg actcaggagg
    12001 tggcatgatg acgaccttaa ccgctcgacc ggaagccatt accttcgatc cgcagcaaag
    12061 tgcgctgatc gtggtggata tgcaaaacgc ttatgccacg ccaggaggct acttagatct
    12121 cgccgggttt gatgtctcaa ccactcgccc ggtcattgcc aacattcaaa ccgccgtgac
    12181 cgcagcgcga gcggcaggga tgctgatcat ctggtttcaa aatggctggg atgaacagta
    12241 tgtcgaagct ggcggccccg gctcaccgaa ttttcataaa tcgaacgccc tgaaaaccat
    12301 gcgtaagcag ccgcagctgc aggggaaatt gctggcgaaa ggctcctggg attatcaact
    12361 ggtggatgaa ctggtgccgc agcctggcga tattgtgctg ccgaagccgc gctacagcgg
    12421 tttcttcaat acgccgctgg acagcatttt gcgcagccgt ggaatacgcc atctggtttt
    12481 caccggtatc gctaccaacg tctgcgtcga atcgacgcta cgcgatggct tttttctgga
    12541 gtatttcggc gtggtgctgg aagacgcaac acaccaggcg gggccggaat ttgcacagaa
    12601 agccgcgttg ttcaatatcg aaaccttttt tggctgggtc agcgacgtcg aaacattctg
    12661 cgacgcgctt tctcccacgt cctttgctca tatcgcttaa ggagtttaac gatgccaaaa
    12721 tccgtaatta ttcccgctgg cagcagcgca ccgctggctc ccttcgttcc cggcacgctg
    12781 gctgatggcg tggtgtatgt ctccggtacg ctggcttttg atcaacataa taacgtgctg
    12841 tttgcagatg acccaaaggc gcaaacccgc cacgttctgg aaaccatccg caaggtgatc
    12901 gagacggcgg gtggcacgat ggcggatgtg accttcaaca gcatctttat taccgactgg
    12961 aaaaattacg ccgcgattaa cgaaatctac gccgagtttt ttccgggtga taaaccggcg
    13021 cgattctgca ttcagtgcgg actggtaaaa cctgacgcgc tggtggaaat cgccacaatt
    13081 gcgcatatcg ccaagtgagg ccgcgatgaa actttcactc tcacctcccc cttatgctga
    13141 tgcgcccgta gtggtgttga tttcgggtct tgggggtagc ggcagttact ggttaccgca
    13201 actggcggtg ctggagcagg agtatcaggt agtctgttac gaccagcgcg gcaccggcaa
    13261 taatcccgac acgctggcag aagattacag tatcgcccag atggcagcgg aactgcatca
    13321 ggcgctggta gccgcaggga ttgagcatta cgcagtggtc ggccatgcgc tcggtgcgct
    13381 ggtgggaatg cagctggcgc tggattatcc cgcgtcggta actgtgctga tcagcgttaa
    13441 cggctggcta cgaataaacg cccatacgcg ccgctgtttt caggttcgcg aacgattact
    13501 gtatagcggc ggcgcgcagg catgggtgga agcgcagccg ttgttcctct atcccgccga
    13561 ctggatggcg gcccgcgcac ctcgccttga ggcagaagac gcgctggcac tggcgcattt
    13621 tcagggcaaa aataatttac tgcgtcgact taacgccctc aaacgcgctg actttagtca
    13681 ccatgcggat cgcatccgct gcccggtgca aatcatctgc gccagtgatg atctgctggt
    13741 gccatcagca tgttccagtg agcttcatgc cgccctgccc gatagccaga aaatggtgat
    13801 gcgctatggc ggacacgcct gcaacgtgac cgaccccgaa acgtttaatg ctcttttact
    13861 caacgggctt gccagcctgt tacatcaccg cgaagccgcc ctgtaaggaa ttgctatgaa
    13921 cgaagccgtt agcccaggtg cgcttagcac cctgttcacc gatgcccgca ctcacaacgg
    13981 ctggcgggag acacccgtca gcgatgagac gttacgggag ctttatgccc tgatgaaatg
    14041 ggggccgaca tcagctaact gttctccggc acggatcgtg tttatccgca ctgtagaagg
    14101 aaaagaacgt ctgcgcccgg cgctttccag cggcaatcta caaaaaaccc tgaccgcgcc
    14161 cgtcaccgct atcgttgcct gggacagtga attttatgaa cggttaccac tactgtttcc
    14221 ccacggtgat gcccgcagtt ggtttacctc cagcccacaa cttgccgaag aaacagcgtt
    14281 tcgcaacagc tccatgcagg cggcctatct gatcgtcgct tgccgtgcgc tgggactgga
    14341 taccggcccg atgtcgggtt ttgaccgtca atacgttgac gacgcttttt ttgcaggcag
    14401 cacgctgaag agcaatctgc tgattaatat cggctatggc gatagcagca aactttatgc
    14461 gcgcctgcca cgtctgtcct ttgaagaagc ctgcgggctg ttgtaaggag caaactatga
    14521 acatagttga tcaacaaacc tttcgcgatg cgatgtcctg tatgggcgcg gcggtcaata
    14581 tcatcaccac ggacggtcca gccgggcgcg ccgggttcac cgccagcgcg gtctgcagcg
    14641 tgaccgatac gccgcccaca ttactggtgt gcctgaatcg tggggcgtcc gtctggccgg
    14701 tattcaatga aaatcgaacg ctatgtgtaa atacacttag cgccgggcag gagccgcttt
    14761 caaacctttt tggcggcaaa acgcccatgg aacaccgctt tgccgccgcc cgctggcaga
    14821 cgggtgtgac cggatgcccg caactggaag aggcactggt ttcgtttgac tgccgtatca
    14881 gccaagtggt gagcgtcggc acccacgaca ttttgttttg cgccatcgaa gcgattcatc
    14941 gtcacgccac accctacggg ctggtgtggt tcgatcgcag ttatcacgcg ctgatgcgcc
    15001 ctgcttgtta acctccttaa ggagacagct gatggcaatg ttcggttttc ctcactggca
    15061 gttaaaatcg acctctatag agagcggcgt ggtcgcgccg gatgaacgat tgccgtttgc
    15121 tcagacggca gtaatgggcg ttcaacacgc ggtggcgatg tttggcgcga cggtgttaat
    15181 gccgattctg atggggctgg atcccaatct ttccatttta atgtcgggga tcggcacgtt
    15241 actgtttttc tttattaccg gcgggcgcgt ccccagttat ctcggttcca gcgcggcttt
    15301 tgtcggcgtg gtgattgccg cgacgggctt taacggtcag ggcattaacc cgaatatcag
    15361 cattgcgctg ggcgggatta tcgcctgtgg gctggtttat accgtcattg gcctggtggt
    15421 gatgaaaatt ggtacacgct ggattgaacg actaatgccg ccggtggtga cgggtgcggt
    15481 ggtgatggcg attggcctga acttagcgcc tatcgcagtg aaaagtgtat cggcttcggc
    15541 ctttgatagc tggatggcgg taatgacggt gctgtgtatt gggctggtgg cggtgtttac
    15601 ccgtggcatg atccagcggt tattgattct cgtaggttta attgtcgcct gtctgctgta
    15661 tggcgtgatg accaacgttt tagggctggg aaaagccgtc gattttactc tcgtcagcca
    15721 tgctgcctgg ttcggtctgc cacatttttc cactcctgct tttaatggtc aggcaatgat
    15781 gctgattgcg cccgtggcgg tgattctggt ggcggaaaac ttaggtcatc tcaaggcagt
    15841 cgccgggatg accggacgca atatggaccc gtatatgggg cgggcattcg taggcgatgg
    15901 tctggcaacg atgctttccg gctctgtcgg cggtagcggc gtgaccacct atgctgaaaa
    15961 tatcggtgtg atggccgtga ccaaagtcta ctcgacgctg gtgtttgttg ctgctgccgt
    16021 catcgccatg ctgttgggct tttcgccgaa atttggcgcg ctgatccata ccattcctgc
    16081 accggtgatt ggtggtgctt caattgttgt gttcgggctg attgccgtcg caggcgcaag
    16141 gatctgggta caaaaccgtg tcgatttaag ccagaacggt aatttgatta tggtcgcagt
    16201 aaccttagtg ctgggcgcgg gtgattttgc tctcacgctg ggcggtttta cgttgggagg
    16261 gatcggtaca gcaacctttg gcgcgatttt actcaatgcg ttgttaagca gaaggttggt
    16321 tgacgttcca ccgccagaag ttgttcatca ggagccataa acagaaaacc gccgggatta
    16381 ccggcggtga tgactttttg acgagcctaa gaaaaaaatg cattcgtcat tgattagccc
    16441 ggctagttgt cgcttttgcc gtgactgctc ttgccacctt ttttacctgc ttcagatgcg
    16501 cgctgcgggt cattcttgaa attacccccg ctgtgctgtc cacctttttt acctgcttct
    16561 gatgctcttt cgcggtcttc tgcaaaattg ccggaaccgc ctcgatggtt tgccattact
    16621 gacctccgtc tgggtataga catcatattg catagaatta acgcggcgta tggcggctgc
    16681 catattttcg ctacgtggga ctaagcttag tgaactgacg cgggcagacc cgcgtttggt
    16741 aatatcctgc aacagcttat tagcgagaat agatatcatc tccaataatt atccataagc
    16801 cgctcttatg attaaaaaaa cgcgatgaga taaaaatgtg tcattttgcg acaaaattac
    16861 gtgcttgtga aagttgttat aaatcaaata agtggttgtg aaatttgcac tctgaaaagg
    16921 acgtcttatc tttaaataag tggtagcgaa tcgctacgga atagagataa cacgaggagt
    16981 ggttagaaat ggctaaagtt ctggtgcttt attattccat gtacggacat attgaaacga
    17041 tggcacgcgc agtcgctgag ggtgcaagca aagtcgatgg cgcagaagtt gtcgttaagc
    17101 gcgtaccgga aaccatgccg ccgcaattat ttgaaaaagc aggcggtaaa acgcaaactg
    17161 caccggttgc aaccccgcaa gaactggccg attacgacgc cattattttt ggtacaccta
    17221 cccgctttgg caacatgtcc ggtcaaatgc gtaccttcct cgaccagacg ggcggcctgt
    17281 gggcttccgg cgcactatac ggaaaactgg cgagcgtctt tagttccacc ggtactggcg
    17341 gcggtcagga acaaactatt acttcaacct ggacgaccct tgcgcatcac ggcatggtga
    17401 ttgtccccat tggctacgca gcgcaggaat tatttgacgt ttcacaggtt cgcggcggta
    17461 cgccgtacgg cgcaaccacc atcgcaggcg gtgacggctc acgccagcca agccaggaag
    17521 aactgtctat tgctcgttat caaggggaat atgtcgcagg tctggcagtt aaacttaacg
    17581 gctaatcttc aacaggagga tacgcatgcc aactcaagaa gcgaaagctc atcacgtcgg
    17641 tgaatgggca tctctgcgca atacgtcgcc ggaaatagcc gaggccattt tcgaagtcgc
    17701 cgggtacgac gaaaaaatgg cggaaaagat ttgggaagaa ggtagcgatg aagtgttagt
    17761 caaagccttt gctaagaccg ataaagattc gcttttttgg ggcgaacaga ccatcgaacg
    17821 taaaaacgtt taaccagcga ctcccccact tctcgcgggg gagttttctg ttatttcacc
    17881 gcctcattca acacgctatc aaacttatcc attgggcaga aaccgttggc atctatcggg
    17941 caaccgctta attccagcgt cacacgctga gcaggtgcct gcagggttaa cgcatcggca
    18001 ttacgtaact gttccgcact ctgatacaca tattcaattt tcatcaaatc gcgattggct
    18061 ttgctgtcat gccaacgctg gaaaacgatt ttgccgccaa tcggcgtgcg ttcgttctgg
    18121 tcatgcaact gatacggttt gaaatccagc gccgttaaca gagaggcaat gttggagtcg
    18181 tgcccaacca acactgtaat tttcggtgcg ctggtgcgat cggtgaccag agctttgtcg
    18241 atataactga ccagcggttt cgcaacattg cgcgccactt ccggtgaggt aaacaggctg
    18301 tcctggtagc cgtttttaag cttcgacaac accttccact gctggtcaga tttgatttct
    18361 ccccaggcca cctgatccat cggaaaacct tcgtaatatt gcaaagtaaa cgcatctacc
    18421 agcgagttgc cgactttcag cggcccggaa acacctggtt cttgttgata cttggcgcta
    18481 aaggtatttt tgccatccac cagcgaacac tgttgtttct ctttacaggc aggggaatct
    18541 ttatagttaa cgattttttc cagtagttgg tagctgtcgg taagctggag tttgctgagc
    18601 tctttctcca ttgccgccac cgcctgttca ctgaatgcgg cggaatcatc ggtgatcacc
    18661 gggttaaagg ttgggtccat agttcccatt ttttcctggt gatgcacagg aatatcacac
    18721 cccggaaatg cgccggtaat aaagaactgt gcggtcgcga cagtacgttg cagactattg
    18781 gcataggcat aaacggtgtc cggcggcggg cattcccccg attttaccat cccctgctct
    18841 gccagccatt cacgcatgta atggcccata tacacttcga gcacgccacc tttggtggtg
    18901 agttgcccac cggggacgtc ccattctggc catttattcg gcgtcgactg ctccagcaca
    18961 ctgccattgt tcgccagcgg cgcacgtaag ttatggcggc tcatcatgag cacttgctgt
    19021 agctgatagc cttccggtac ggtttgtgcc tgagcgtttg aagcgattaa aactatccct
    19081 gccacagctg cggcgattag cgttttgttc attcctggca cctcttttgt tatcaatcac
    19141 taaagagtgt gacagaaata tgacattttt ccgggaacag gctcgcaaaa cagcttgttg
    19201 agcggctgtt tttatattca tctttaaaaa caggtaaggt ttgatgcaag ctatgtctgc
    19261 ttatcccctg cctcgcgtac accgctgatg attacacctg tggctaaaca ggatatcagc
    19321 ggcgttacta atacagaggc aatagtacca ataataagag aagtgaggct aataacaatg
    19381 gtttttagca catgcccttg tcagtaaatt gcataacgat ttaaatagtc gagttgcgca
    19441 ttcctttcct tattgtttaa cttgtaagcc tgagcaaaaa gttcaggagg gaggtaaacg
    19501 tcataatgat tgccagtgtt cattaaataa ccatactcaa gatcttcatc tgttgaaaag
    19561 gattcattcc ccaaggagat tgatgccata ttactattaa caataaataa tgagcaaatg
    19621 ctatctgaaa gagcagtgag gaaatttttc acctcattaa ccctctgctc tgggtcggtg
    19681 t
//
LOCUS       DAPGWB010000081        19211 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.081, whole genome shotgun sequence.
ACCESSION   DAPGWB010000081 DAPGWB010000000
VERSION     DAPGWB010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 19211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19211
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.081"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            33..1322
                     /locus_tag="RHX79_002768"
     CDS             33..1322
                     /locus_tag="RHX79_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate degradation bifunctional
                     isomerase/decarboxylase"
                     /protein_id="HDV2197921.1"
                     /translation="MKGTIFAVALNHRSQLDAWQEAFQQSPYKAPPKTAVWFIKPRNT
                     VIGCGEPIPFPQGEKVLSGATVALIVGKTATKVREEDAAEYIAGYALANDVSLPEESF
                     YRPAIKAKCRDGFCPIGETVALSNVDNLTIYTEINGRPADHWNTADLQRNAAQLLSAL
                     SEFATLNPGDAILLGTPQARVEIQPGDRVRVLAEGFPPLENPVVDEREVTTRKSFPTQ
                     PHPHGTLFALGLNYADHASELEFKPPEEPLVFLKAPNTLTGDNQTSVRPNNIEYMHYE
                     AELVVVIGKQARSVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPML
                     STIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIA
                     TGTPKGLSDVVPGDEVVVEVEGVGRLVNRIVSEETAK"
     gene            1319..2785
                     /gene="hpaE"
                     /locus_tag="RHX79_002769"
     CDS             1319..2785
                     /gene="hpaE"
                     /locus_tag="RHX79_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate semialdehyde
                     dehydrogenase"
                     /protein_id="HDV2197922.1"
                     /translation="MKKVNHWINGKNVAGNDYFQTTNPATGEVLADVASGGEAEINQA
                     VAAAKEAFPKWANLPMKERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIP
                     RASHNFEFFAEVCQQMNGKTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAP
                     CLALGNTAVLKMSELSPLTADRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVR
                     AVSFTGGTATGRNIMKNAGLKKYSMELGGKSPVLIFEDADIERALDAALFTIFSINGE
                     RCTAGSRIFIQQSIYPEFVKRFAERANRLRVGDPNDPNTQVGALISQQHWEKVSGYIR
                     LGIEEGATLLAGGPDKPSDLPAHLKGGNFLRPTVLADVDNRMRVAQEEIFGPVACLLP
                     FKDEAEGLRLANDVEYGLASYIWTQDVSKVLRLARGIEAGMVFVNTQNVRDLRQPFGG
                     VKASGTGREGGEYSFEVFAEMKNVCISMGDHPIPKWGV"
     gene            2787..3638
                     /gene="hpaD"
                     /locus_tag="RHX79_002770"
     CDS             2787..3638
                     /gene="hpaD"
                     /locus_tag="RHX79_002770"
                     /EC_number="1.13.11.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxyphenylacetate 2,3-dioxygenase"
                     /protein_id="HDV2197923.1"
                     /translation="MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCR
                     EMGVDTIIVFDTHWLVNSAYHINCADHFEGVYTSNELPHFIRDMTYNYEGNPELGQLI
                     ADEALKLGVRAKAHNIPSLKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSRKL
                     GEAILKAIEQYDGTVAVLASGSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWRE
                     GQFKEFCNMLPEYADYCYGEGNMHDTVMLLGMLGWDKYDGKVEFITELFPSSGTGQVN
                     AVFPLPA"
     gene            3648..4028
                     /locus_tag="RHX79_002771"
     CDS             3648..4028
                     /locus_tag="RHX79_002771"
                     /EC_number="5.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate
                     Delta-isomerase"
                     /protein_id="HDV2197924.1"
                     /translation="MPHFIVECSDNIREEADLPGLFAKVNPTLAATGIFPLAGIRSRV
                     HWVDTWQMADGQRDYAFVHMTLKIGAGRSLESRQQAGEMLFELIKTHFAALMESRLLA
                     LSFEIEELHPTLNFKQNNVHALFK"
     gene            4139..4942
                     /gene="hpaH"
                     /locus_tag="RHX79_002772"
     CDS             4139..4942
                     /gene="hpaH"
                     /locus_tag="RHX79_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710089.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HDV2197925.1"
                     /translation="MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQR
                     EWVRLKIAEGRTLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIV
                     PRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFD
                     TISDNAANAGVILGGRPIKPDELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWL
                     ANKLAPYDVQLEAGQIILGGSFTRPVPARKGDTFHVDYGNMGSISCRFV"
     gene            4953..5741
                     /gene="hpaI"
                     /locus_tag="RHX79_002773"
     CDS             4953..5741
                     /gene="hpaI"
                     /locus_tag="RHX79_002773"
                     /EC_number="4.1.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-2-oxoheptanedioate aldolase"
                     /protein_id="HDV2197926.1"
                     /translation="MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGE
                     HAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAR
                     EAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQI
                     LDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIREAGKAPGILIANEQL
                     AKRYLELGALFVAVGVDTTLLARAAEALAARFGAQATTVKPGVY"
     gene            5916..7292
                     /gene="hpaX"
                     /locus_tag="RHX79_002774"
     CDS             5916..7292
                     /gene="hpaX"
                     /locus_tag="RHX79_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate permease"
                     /protein_id="HDV2197927.1"
                     /translation="MSDTSPAIPESIDPANQHKALTAGQQAVIKKLFRRLIVFLFVLF
                     IFSFLDRINIGFAGLTMGRDLGLSATMFGLATTLFYAAYVIFGIPSNIMLSIVGARRW
                     IATIMVLWGIASTATMFATGPTSLYVLRILVGITEAGFLPGILLYLTFWFPAYFRARA
                     NALFMVAMPVTTALGSIVSGYILSLDGVMALKGWQWLFLLEGFPSVLLGVMVWFWLDD
                     SPDKAKWLTKEDKKCLQEMMDNDRLTLVQPEGAISHHAMQQRSMWREIFTPVVMMYTL
                     AYFCLTNTLSAISIWTPQILQSFNQGSSNITIGLLAAVPQICTILGMVYWSRHSDRRQ
                     ERRHHTALPYLFAAAGWLLASATDHNMIQMLGIIMASTGSFSAMAIFWTTPDQSISLR
                     ARAIGIAVINATGNIGSALSPFMIGWLKDLTGSFNSGLWFVASLLVIGAGIIWAIPMQ
                     SSRPRATP"
     gene            7302..8192
                     /gene="hpaA"
                     /locus_tag="RHX79_002775"
     CDS             7302..8192
                     /gene="hpaA"
                     /locus_tag="RHX79_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate catabolism regulatory
                     protein HpaA"
                     /protein_id="HDV2197928.1"
                     /translation="MCDRQIANIDISKEYDESLGTDDVHYQSFARMAAFFGRHMLPHR
                     HEQYFQMHFLNSGQIELQLDDHRYSVEAPLFVLTPPSVPHAFITESDADGHVLTVRED
                     LIWPLLEVLYPGTRETFGLPGICLSLADKPDELAALEHYWQLIERESVEQLPGREHTL
                     TLLAQAVFTLLLRNAKLDDHAASGMRGELKLFQRFNMLIESHFHQHWTVPDYANELHI
                     TESRLTDICRRFANRPPKRLIFDRQLREAKRLLLFSDNAVNNIAWQLGFKDPAYFARF
                     FNRLVGCSPSAYRAKKVPVT"
     gene            8443..10005
                     /gene="hpaB"
                     /locus_tag="RHX79_002776"
     CDS             8443..10005
                     /gene="hpaB"
                     /locus_tag="RHX79_002776"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     oxygenase component"
                     /protein_id="HDV2197929.1"
                     /translation="MKPEDFRASTQRPFTGEEYLKSLQDGREIYIYGERVKDVTTHPA
                     FRNAAASVAQLYDALHKPEMQDSLCWNTDTGSGGYTHKFFRVAKSADDLRQQRDAIAE
                     WSRLSYGWMGRTPDYKAAFGCALGANPGFYGQFEQNARNWYTRIQETGLYFNHAIVNP
                     PIDRHLPTDKVKDVYIKLEKETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENP
                     DFALMFVAPMDADGVKLISRASYEMVAGATGSPYDYPLSSRFDENDAILVMDNVLIPW
                     ENVLIYRDFDRCRRWTMEGGFARMYPLQACVRLAVKLDFITALLKKSLECTGTLEFRG
                     VQADLGEVVAWRNTFWALSDSMCSEATPWVNGAYLPDHAALQTYRVLAPMAYAKIKNI
                     IERNVTSGLIYLPSSARDLNNPQIDQYLAKYVRGSNGMDHVQRIKILKLMWDAIGSEF
                     GGRHELYEINYSGSQDEIRLQCLRQAQSSGNMDKMMAMVDRCLSEYDQNGWTVPHLHN
                     NDDINMLDKLLK"
     gene            10023..10535
                     /locus_tag="RHX79_002777"
     CDS             10023..10535
                     /locus_tag="RHX79_002777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase reductase
                     subunit"
                     /protein_id="HDV2197930.1"
                     /translation="MQLDEQRLRFRDAMASLSAAVNIITTEGDAGQCGITATAVCSVT
                     DTPPSLMVCINANSAMNPVFQGNGKLCVNVLNHEQELMARHFAGMTGMAMEERFSLSC
                     WQKGPLAQPVLKGSLASLEGEIRDVQAIGTHLVYLVEIKNIILSAEGHGLIYFKRRFH
                     PVMLEMEAAI"
     gene            10928..13078
                     /gene="btsT"
                     /locus_tag="RHX79_002778"
     CDS             10928..13078
                     /gene="btsT"
                     /locus_tag="RHX79_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313340.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate/proton symporter BtsT"
                     /protein_id="HDV2197931.1"
                     /translation="MDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASV
                     SVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAG
                     PLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPV
                     PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPG
                     RVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWL
                     ILAPRDYLATFLKIGVIVGLALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFIT
                     IACGAVSGFHALISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLY
                     FAMNTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQT
                     AKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGILFEALFILTALDAG
                     TRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLW
                     PLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVTVVPAVWLLICTTWALGLKLFSTNP
                     QMEGFFYMASQYKEKIANGTDLTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYG
                     FKTWLAVRNSDKRTDKETPYVPIPEGGVKISSHH"
     gene            13128..13331
                     /locus_tag="RHX79_002779"
     CDS             13128..13331
                     /locus_tag="RHX79_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HDV2197932.1"
                     /translation="MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSY
                     EEFFRERQNARYGGDGKGGMRCC"
     gene            13342..14298
                     /gene="yjiA"
                     /locus_tag="RHX79_002780"
     CDS             13342..14298
                     /gene="yjiA"
                     /locus_tag="RHX79_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313338.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HDV2197933.1"
                     /translation="MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVS
                     VDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMA
                     DPGPIIQTFFSHEILCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKT
                     DVAGEAEKLRERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIA
                     DKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGV
                     QRLYSADWDRPWGDETPHSTMVFIGIQLPEDEIRSAFAGLKK"
     gene            complement(14376..16916)
                     /locus_tag="RHX79_002781"
     CDS             complement(14376..16916)
                     /locus_tag="RHX79_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HDV2197934.1"
                     /translation="MKNRNRMIVNCVTASLMYYWSLPALAEQSSSEIKIVRDEYGMPH
                     IYANDTWHLFYGYGYVVAQDRLFQMEMARRSTQGTVAEVLGKDFVKFDKDIRRNYWPD
                     AIRAQIAALSPEDMSILQGYADGMNAWIDKVSTNPETLLPKQFNTFGFTPKRWEPFDV
                     AMIFVGTMANRFSDSTSEIDNLALLTALKDKYGVSQGMAVFNQLKWLVNPSAPTTIAV
                     QESSYPLKFNQQNSQTAALLPRYDLPAPMLDRPAKGADGALLALTAGKNRETIATQFA
                     QGGANGLAGYPTTSNMWVIGKSKAQDAKAIMVNGPQFGWYAPAYTYGIGLHGAGYDVT
                     GNTPFAYPGLVFGHNGVISWGSTAGFGDDVDIFAERLSAEKPGYYLHNGKWVKMLSRE
                     ETITVKNGQAETFTVWRTVHGNILQTDQTTQTAYAKSRAWDGKEVASLLAWTHQMKAK
                     NWQEWTQQAAKQALTINWYYADVNGNIGYVHTGAYPDRQSGHDPRLPVPGTGKWDWKG
                     LLPFEMNPKVYNPLSGYIANWNNSPQKDYPASDLFAFLWGGADRVTEIDRLLEQKPRL
                     TADQAWDVIRQTSRQDLNLRLFLPTLQAATSGLTQSDPRRQLVDTLTRWDGINLLNDD
                     GKTWQQPGSVILNVWLTSMLKRTVVAAVPMPFDKWYSASGYETTQDGPTGSLNISVGA
                     KILYEAVQGDKSPIPQAVDLFAGKPQQEVVLAALEDTWETLSKRYGNNVSNWKTPAMT
                     LTFRANNFFGVPQAAVEETRHQAEYQNRGTENDMIVFSPTTSDRPVLAWDVVAPGQSG
                     FIAPDGTVDKHYEDQLKMYENFGRKSLWLTKQDVEAHKESQEVLHVQR"
     gene            complement(17268..17432)
                     /locus_tag="RHX79_002782"
     CDS             complement(17268..17432)
                     /locus_tag="RHX79_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000394265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HDV2197935.1"
                     /translation="MEFHENKAKTPFIRLVQLWQAVRRWRRQMQARRVLQQMSDERLR
                     DIGLRREDVE"
     gene            17609..19021
                     /locus_tag="RHX79_002783"
     CDS             17609..19021
                     /locus_tag="RHX79_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDV2197936.1"
                     /translation="MTRYQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQ
                     QAYQTLETMKLITPQPRSGYFVAQRKAQPPVPPMTRPVQRPVEITQWDQVLDMLVAHS
                     DSSIVPLSKSTPDVETPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLML
                     DSGSVVTADDIIITSGCHNSMSLALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIE
                     IPTDPETGISVEALELALEQWPIKGIILVPNCNNPLGFIMPDARKRAVLSLAQRHDIV
                     IFEDDVYGELATEYPRPRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLL
                     HMKYAISSFNVPSTQMAAATFVLEGHYHRHIRRMRQTYQRNLALYTCWIREYFPCEIC
                     ITRPKGGFLLWVELPEQVDMVCVARQLYCMKIQVAAGSIFSASGKYRNCLRINCALPL
                     SETNREALKQIGDAVYRAME"
BASE COUNT         4476 a         5215 c         5097 g         4423 t
ORIGIN      
        1 atgattaaaa tgatcgaatc cgaggagtgg taatgaaagg cactatcttc gccgtagcgt
       61 tgaaccatcg cagccaactt gatgcatggc aggaagcgtt ccagcaatcc ccctacaaag
      121 ccccgcctaa aactgcggtc tggtttatta aaccgcgcaa tacggtgatt ggttgcggtg
      181 aaccgattcc ctttccacag ggtgaaaagg tactgagcgg tgcgactgtt gcgctgattg
      241 tgggaaaaac ggcgacgaaa gtacgtgaag aagatgcggc agagtacatc gccggatatg
      301 cgctggctaa cgacgtcagc ctgccggaag agagctttta ccgcccggca atcaaagcaa
      361 aatgtcgtga tggattctgc cccattggcg aaaccgtggc tctcagcaat gtcgataatc
      421 tgaccatcta taccgagatc aacgggcgtc ctgccgatca ctggaatacc gccgatttac
      481 aacgtaacgc cgcgcagttg ctgagcgccc tgagcgaatt tgccacactg aatccaggcg
      541 atgccattct gctcggcacg ccacaggcgc gcgtggaaat acagccaggc gatcgcgttc
      601 gtgttctcgc agaaggtttc ccgccgctgg aaaatccggt agtggacgaa cgtgaagtga
      661 ccacgcgcaa gagcttccca acgcagccac acccgcacgg cacgctgttt gccctcggcc
      721 tgaactacgc cgaccacgcc agcgaactgg aatttaagcc accggaagaa ccgctggtgt
      781 tcctgaaagc gccaaatacc ctcactggcg ataaccagac ctccgtgcgt ccaaacaata
      841 ttgaatacat gcactatgaa gcggagctgg tggtagttat tggcaaacag gcgcgtagcg
      901 tcagcgaagc cgatgccatg gattatgtcg cgggctacac cgtgtgtaac gactacgcca
      961 ttcgcgacta tctggaaaac tactaccgcc ctaacctgcg ggtaaaaagc cgcgacggac
     1021 tgacgccgat gctttcaacc atcgtgccga aagaggcgat cccggacccg cataatctga
     1081 cccttcgcac cttcgtcaac ggcgagttac gccagcaagg caccaccgcc gatctgatct
     1141 tcagcgtgcc cttcctgatc gcctacttaa gcgaatttat gaccctgaat ccgggcgaca
     1201 tgatcgccac cggcacacca aaaggcttat ctgacgtggt gcctggcgat gaagtagtgg
     1261 tggaagtaga aggcgtgggc cgcctggtga accgaattgt gagtgaggaa acagcgaaat
     1321 gaaaaaagta aatcattgga tcaacggcaa aaatgttgca ggtaacgact acttccagac
     1381 caccaatccg gcaacgggtg aagtgctggc ggatgtggcc tctggcggtg aagcggagat
     1441 caatcaggcg gtagcggcag cgaaagaggc gttcccgaaa tgggccaatc tgccaatgaa
     1501 agagcgtgcg cgcctgatgc gccgtctggg cgatctgatc gaccagaacg tgccggagat
     1561 cgccgcgatg gaaaccgcgg acacgggcct gccgatccat cagaccaaaa atgtgttgat
     1621 cccacgcgct tctcacaact ttgaattttt cgcggaagtc tgccagcaga tgaacggcaa
     1681 gacttatccg gtcgacgaca agatgctcaa ctacacgctg gtgcagccgg taggcgtttg
     1741 tgcactggtg tcaccgtgga acgtgccgtt tatgaccgcc acctggaagg tcgcgccgtg
     1801 tctggcgctg ggcaataccg cggtactgaa aatgtcggaa ctctccccgc tgaccgccga
     1861 ccgcctgggt gagctggcgc tggaagctgg tattccggcg ggcgtgctga acgtggtaca
     1921 gggctacggc gcaaccgcag gcgatgcgct ggtccgtcat catgacgtgc gtgccgtgtc
     1981 gttcaccggc ggtacggcga ccgggcgcaa catcatgaaa aacgccgggc tgaaaaaata
     2041 ctccatggaa ctgggcggta aatcgccggt gctgattttt gaagatgctg atattgaacg
     2101 cgcgctggac gccgccctgt tcaccatctt ctcgatcaac ggcgaacgct gcaccgccgg
     2161 ttcgcgcatc tttattcagc aaagcatcta cccggaattc gttaaacgct ttgccgaacg
     2221 cgccaaccgt ctgcgcgtgg gcgacccgaa cgatccgaat acccaggttg gcgcgcttat
     2281 cagccagcag cactgggaaa aagtctccgg ctatatccgt ctcggcattg aagaaggcgc
     2341 aaccctgctg gcgggcggcc cggataaacc gtccgacctg cctgcgcacc tgaaaggcgg
     2401 caacttcctg cgcccaaccg tgctggcaga cgttgataac cgtatgcgag tcgcccagga
     2461 agagattttc gggccggtcg cctgcctgct gccgtttaaa gacgaagccg aaggcttacg
     2521 tctggcaaac gacgtggagt acggcctcgc gtcgtacatc tggacacagg atgtcagcaa
     2581 agtgttacgc ctggcgcgtg gcattgaagc tggcatggtg ttcgtcaaca cccagaacgt
     2641 gcgtgacctg cgccagccat ttggcggcgt aaaagcctcc ggcaccgggc gtgaaggcgg
     2701 tgagtacagc ttcgaagtgt tcgcggaaat gaagaacgtc tgcatttcca tgggcgacca
     2761 tccaattccg aaatggggag tctgatatgg gtaagttagc gttagccgcc aagatcacgc
     2821 acgtaccgtc gatgtatctc tctgaactgc cagggaaaaa ccacggttgc cgccagggcg
     2881 cgatcgacgg gcataaagag atcagcaagc gttgccggga aatgggcgtc gataccatta
     2941 tcgttttcga tacccactgg ctggtcaaca gtgcttatca catcaactgt gcagaccatt
     3001 ttgaaggcgt ctacaccagc aacgagctgc cgcattttat ccgcgatatg acctacaact
     3061 acgagggcaa cccggagttg gggcagctta ttgccgatga agccttaaag ctcggcgtgc
     3121 gggcaaaagc gcacaacatt cccagcctga aactggaata cggcacgctg gtgccaatgc
     3181 gctacatgaa tgaagacaag cacttcaaag tggtttccat ttcagctttc tgcactgttc
     3241 acgattttgc cgacagccgc aagctgggcg aggcgattct gaaagcgatc gaacagtacg
     3301 acggcaccgt ggcggtcctt gccagcggtt cgttatcgca ccgctttatt gacgatcagc
     3361 gagcggaaga agggatgaac agctacaccc gcgagttcga ccgccagatg gatgagcgcg
     3421 tggtgaagct gtggcgcgaa ggccagttca aagagttctg caatatgctg ccggagtacg
     3481 ccgactactg ctacggcgaa ggcaatatgc acgacacggt gatgctgctg gggatgctcg
     3541 gctgggataa atacgacggc aaggtggagt ttatcaccga gctattccca agctctggca
     3601 ccggtcaggt taacgctgtt ttcccgcttc ccgcgtaagg acgttttatg ccgcacttta
     3661 tcgttgaatg cagtgacaac atccgcgaag aagccgacct gccggggttg ttcgccaaag
     3721 tgaatccgac gctggcagcc acgggtattt ttccgctggc gggtattcgc agccgcgtgc
     3781 attgggtcga tacctggcag atggccgacg ggcagcgtga ttatgccttc gtgcatatga
     3841 cgttgaaaat cggcgcaggt cgcagcctgg aaagccgtca gcaggcgggt gaaatgctgt
     3901 ttgaactgat taaaacgcac ttcgccgccc tgatggagag ccgcctgctg gcgttgtcgt
     3961 ttgagattga agagctgcat ccgacgctga attttaaaca aaacaacgtg cacgcattgt
     4021 ttaagtagcg cgcagattgc ccggtggcgc tgcgcttacc gggcctacaa aaccccaaac
     4081 cgtacaccgt aggccggata aggcgcagcc gcatccggca atgccacagg atatcgctat
     4141 gttcgataaa cacacccaca ccctgatcgc ccagcgtctg gatcaggcag aaaaacagcg
     4201 cgaacagatc cgcgcgatct cgctggatta cccggagatc accatcgaag acgcttacgc
     4261 ggtgcagcgt gaatgggttc gactgaaaat cgccgaaggt cgcacgctga aaggccacaa
     4321 aatcggcctg acctcgaaag cgatgcaggc aagctcgcag atcagcgaac cggattacgg
     4381 cgcgctgctg gatgacatgt tcttccacga tggcagcgat atcccgaccg atcgctttat
     4441 cgtgccgcgc attgaagtgg agctggcttt cgtgctggca aaaccgctgc gtgggccaaa
     4501 ctgcacgctg ttcgacgtct acaacgccac ggactacgtg atcccggcgc tggagctgat
     4561 cgacgctcgc tgccacaaca tcgatccgga aacccagcgc ccgcgcaaag tgttcgacac
     4621 catttctgat aacgccgcca acgccggggt gatcctcggt ggtcgtccca ttaagcccga
     4681 tgagttggat ctgcgttgga tctccgccct gatgtatcgc aatggcgtga ttgaagaaac
     4741 cggcgtcgcc gctggtgtgc tgaatcatcc ggcaaacggc gtggcctggc tggcgaacaa
     4801 actcgcaccg tatgacgtac aactggaagc cgggcaaatc attctcggcg gttcgttcac
     4861 ccgcccggtt ccggcgcgta agggcgacac cttccacgtc gattacggca acatgggctc
     4921 cattagctgc cgctttgttt aaggagagaa cgatggaaaa cagttttaaa gcggcgctga
     4981 aagcaggccg cccgcagatc ggattatggc tggggctgag tagcagctac agcgcagagt
     5041 tactggccgg agcaggattc gactggttat tgatcgacgg tgagcacgcg ccgaataacg
     5101 tgcaaaccgt gctcacccag ctacaggcga ttgcgcccta ccccagccag ccggtggtac
     5161 gtccgtcgtg gaacgatccg gtgcaaatca aacaactgct ggacgtcggc acacaaacct
     5221 tgctggtgcc gatggtacaa aacgctgacg aagcccgtga agcggtacgc gccacccgtt
     5281 atccccccgc cggtattcgc ggtgtgggca gtgcgctggc ccgagcctcg cgctggaatc
     5341 gtattcctga ttacctgcaa aaagccaacg atcaaatgtg cgtgctggtg cagatcgaaa
     5401 cgcgtgaggc aatgaagaac ttaccgcaga ttctggacgt ggaaggggtc gacggcgtgt
     5461 ttatcggccc ggcggatctg agcgccgata tgggttatgc cggtaatcca cagcacccgg
     5521 aagtacaggc cgcgattgag caggcgatcg tgcagatccg cgaagcgggc aaagcgccgg
     5581 ggatcctgat cgccaatgag caactggcaa aacgctatct ggaactgggc gcgctgtttg
     5641 tcgccgtcgg cgttgacacc accctgctcg cccgcgccgc tgaagcgctg gcagcacggt
     5701 ttggcgcaca ggccacgacc gttaagcccg gcgtgtatta atgccggatg cgctgcactt
     5761 atccggccta cactcgcacc aaaccgtagg ccggataagg cgtttacgcc gcatccggca
     5821 aaaagccgta ccaaatcgcg gaccggataa ggcgtttgtg cgcatccgcc ataaaccttg
     5881 tcgtacccta caaaaatccc attagaggaa gaaaaatgag cgacacctca cctgccatac
     5941 cggagagtat cgatccggcg aatcagcata aagcgctgac tgccggacaa caggcggtta
     6001 ttaagaagct gtttcgccgc ctgatcgtct ttctgttcgt gctgtttatc ttctcgttcc
     6061 ttgatcgcat caacatcggc tttgccggac tcacgatggg acgcgacctc ggtctgagcg
     6121 ccaccatgtt tggcctcgct accaccctgt tctatgccgc ttatgtcatc ttcggcattc
     6181 ccagcaacat tatgctgagt attgtcggtg cgcggcgctg gatcgccacc atcatggtgc
     6241 tttggggcat cgcctctact gccaccatgt ttgccactgg ccccaccagc ttgtacgtac
     6301 tgcgtatact ggttggcatt accgaagccg gctttctgcc cggcattctg ctgtatttaa
     6361 ccttctggtt tccggcctat ttccgcgccc gtgccaacgc cttgtttatg gtagcaatgc
     6421 cggtaacgac agcgttgggc tcgatcgttt ccggctacat tttgtcgctg gatggcgtca
     6481 tggcattaaa aggctggcag tggctgtttt tgctggaagg cttcccgtcg gtattactcg
     6541 gcgtcatggt gtggttctgg cttgatgact caccggacaa agctaagtgg ctgacgaaag
     6601 aagacaaaaa atgcctgcaa gagatgatgg ataacgatcg tctgacgctg gttcagccag
     6661 agggagccat cagccaccac gccatgcaac aacgcagtat gtggcgggag atcttcactc
     6721 cggtggtgat gatgtatacc ctggcgtatt tctgcctgac caacacactt agtgcgatca
     6781 gcatctggac accgcagatc ctgcaaagtt ttaatcaggg cagcagtaat atcaccatcg
     6841 gcctgctggc cgccgtaccg cagatttgta ccattctcgg gatggtctac tggagccgtc
     6901 actcagatcg ccgccaggaa cgaaggcatc acaccgccct tccttatttg ttcgctgccg
     6961 caggttggtt actggcttcg gcaactgatc acaacatgat ccagatgctg gggatcatta
     7021 tggcttcgac cggatcattc agcgcaatgg cgattttctg gacaacaccg gatcagtcca
     7081 tcagcctgcg ggcacgagcg atcggtattg cggtgatcaa cgccactggc aacattggtt
     7141 cagcgttaag tccgtttatg atcggctggt tgaaagattt gaccggcagc tttaacagtg
     7201 gattgtggtt tgttgcctcg ctgctggtga ttggtgcggg gattatctgg gcgattccaa
     7261 tgcagtcctc ccgtccgcga gcgaccccgt aaggaacgac gatgtgtgac cgtcagattg
     7321 ccaatattga tatcagcaaa gagtacgatg aaagcctggg cacggacgat gtgcattatc
     7381 agtccttcgc ccgcatggcg gccttttttg gccgccatat gctgccacat cgccacgaac
     7441 agtactttca gatgcatttc ctcaatagcg gacagattga gctacaactt gacgatcatc
     7501 gctactcggt ggaagcgccc ctgtttgtcc tgacgccgcc gtcagtacct catgcgttta
     7561 ttacggagtc tgacgccgac ggtcatgtgt tgacggtacg ggaagatctg atctggcccc
     7621 tgctggaagt tctttatccg ggcactaggg aaaccttcgg cctgccgggg atttgcctgt
     7681 cactggcaga taaacccgac gaactggcgg cgctggaaca ctattggcaa ctgatagagc
     7741 gggaatcggt ggaacaactg cctggacggg aacacaccct gacgttactg gcacaggcag
     7801 tgttcaccct actgctgcgt aacgcaaaac tcgacgacca tgccgccagc gggatgcgcg
     7861 gagaattaaa actgttccag cgttttaata tgctgattga aagccatttt catcagcact
     7921 ggacagtacc ggattacgct aacgaactgc atatcaccga atcacgactc acggacatct
     7981 gccgtcgctt tgccaaccgt ccgccaaaac ggttgatttt cgacaggcag ctgcgagaag
     8041 ccaagcggct gctgctgttt tctgataacg ccgtgaacaa tattgcctgg caactcggtt
     8101 ttaaggatcc ggcttatttt gcgcgctttt ttaatcgctt agtcggttgc tcgcccagtg
     8161 cttatcgcgc caaaaaagta cctgtgacgt gaaaatccct tagccttaac gggaaaccag
     8221 gcaccacctg ctattcccct ttctccgcct ggagcaaggg gatttagtaa cgtcaaaaat
     8281 cgctaaaagc gacctcgatc acaaaaccgt acccgacctg aaaagtacca gccattgtcc
     8341 caaaagtctc ttcccgtaat cgcccctgca agcttcaatt gaataacaaa aacaacacac
     8401 aaaattaaca atcgtattcc gattaatact gtagaggtcg acatgaaacc agaagatttc
     8461 cgcgccagta cccaacgtcc gttcaccggg gaagagtatc tgaaaagcct gcaggatggt
     8521 cgcgagatct atatctatgg cgagcgagtg aaagacgtca ctactcatcc ggcatttcgt
     8581 aatgcggcag cgtctgttgc ccaactgtac gacgcgctac acaaaccgga gatgcaggac
     8641 tctctgtgct ggaacaccga caccggcagc ggcggctata cccataaatt cttccgcgtg
     8701 gcgaaaagtg ccgacgacct gcgccagcaa cgcgatgcca tcgctgagtg gtcacgcctg
     8761 agctatggct ggatgggccg taccccagac tacaaagctg ctttcggttg cgcactgggc
     8821 gcgaatccgg gcttttacgg tcagttcgag cagaacgccc gtaactggta cacccgtatt
     8881 caggaaactg gcctctactt taaccacgcg attgttaacc caccgatcga tcgtcatttg
     8941 ccgaccgata aagtgaaaga cgtttacatc aagctggaaa aagagactga cgccgggatt
     9001 atcgttagcg gtgcgaaagt ggttgccacc aactcggcgc tgactcacta caacatgatt
     9061 ggcttcggct cggcacaagt gatgggcgaa aacccggact tcgcactgat gttcgttgcg
     9121 ccaatggatg ccgatggcgt gaaattaatc tcccgcgcct cttatgagat ggtcgcgggt
     9181 gctaccggct cgccatacga ctacccgctc tccagccgct tcgatgagaa cgatgcgatt
     9241 ctggtgatgg ataacgtgct gatcccatgg gaaaacgtac tgatctaccg cgatttcgat
     9301 cgctgccgtc gctggacaat ggaaggcggt tttgcccgta tgtatccgct gcaagcctgt
     9361 gtgcgcctgg cagtgaaatt agacttcatt acagcactgc tgaaaaaatc tctcgaatgt
     9421 accggcaccc tggagttccg tggtgtacag gccgatctcg gtgaagtggt ggcgtggcgc
     9481 aacaccttct gggcattgag tgactcgatg tgttctgaag cgacgccgtg ggtcaacggg
     9541 gcttatttac cggatcatgc cgcactgcaa acctatcgcg tactggcacc aatggcctac
     9601 gcgaagatca aaaacattat cgaacgcaac gttaccagtg gcctgatcta tctcccttcc
     9661 agtgcccgtg acctgaacaa tccgcagatc gaccagtatc tggcgaagta tgtgcgcggt
     9721 tcgaatggta tggatcacgt ccagcgcatc aagatcctca aactgatgtg ggacgccatt
     9781 ggcagcgagt ttggtggtcg ccacgaactg tatgaaatca actactccgg tagccaggat
     9841 gagattcgcc tacagtgtct gcgccaggca caaagctccg gcaatatgga caagatgatg
     9901 gcgatggttg atcgctgcct gtcggaatac gaccagaacg gctggactgt gccgcacttg
     9961 cacaacaacg acgatatcaa catgctggat aagctgctga aataacgcag caggaggtta
    10021 agatgcaatt agatgaacag cgcctgcgct ttcgtgacgc gatggccagc ctgtcggcag
    10081 cggtaaatat tatcaccacc gagggcgacg ccggacaatg cgggattacg gcaacggccg
    10141 tctgctcggt cacggataca ccaccatcgc tgatggtgtg cattaacgcc aacagtgcga
    10201 tgaacccggt ttttcagggc aacggcaagt tgtgcgtcaa cgtcctcaac catgagcagg
    10261 aactgatggc acgccacttc gcgggcatga cgggcatggc gatggaagag cgttttagcc
    10321 tctcatgctg gcaaaaaggt ccgctggcgc agccggtgct aaaaggttcg ctggccagtc
    10381 ttgaaggtga gatccgcgat gtgcaggcaa ttggcacaca tctggtgtat ctggtggaga
    10441 ttaaaaacat catcctcagt gcagaaggtc acggacttat ctactttaaa cgccgtttcc
    10501 atccggtgat gctggaaatg gaagctgcga tttaagctcc agccccttca cgcattcgtc
    10561 gaaggggcat ttttattgtg atctcaatca catatccacc cgatgaataa ttcttgccca
    10621 accgctcacc gccattcctg accgcttaca tccctaaaat aaccactcag ttatttacct
    10681 tactttacgc gcgcgtaact ctggcaacat cactgcagga tagcggtcaa tttacctcct
    10741 caaacgcaac gcaaacctag aacggcttcg gcctatgatt aacaaattac tctatgaatt
    10801 ttggtttgca ggaaggcagc aagtgagtga atccccggga gcttgcaaca gtaagtgaca
    10861 ggggtgaacg aacgcagctg ccgcacctgt aagccaaaag acgacgagta aaatgccagg
    10921 ttttactatg gatacgaaaa aactattcaa gcacataccc tgggtgattc tcggaatcat
    10981 cggtgcattc tgcctcgcgg tagttgcatt acgtcggggg gagcacgtca gcgccctgtg
    11041 gatcgtggtc gcctctgtgt cggtgtatct ggtggcgtat cgctactaca gtctgtacat
    11101 cgcccagaag gtgatgaaac tcgaccccac gcgcgcgacg cctgcggtta ttaacaacga
    11161 cggtctgaac tacgttccga ccaaccgtta cgtgttgttt ggtcaccact tcgccgctat
    11221 cgccggtgct ggtccgctgg ttggtccggt tctcgccgcg cagatgggct acctacctgg
    11281 cacgctgtgg ctgctggcgg gggtagtact ggccggtgcg gtacaggact ttatggtgct
    11341 gtttatctcc tctcgccgta acggcgcatc tctcggtgag atgatcaaag aagagatggg
    11401 accagtaccg gggactatcg cgctgtttgg ctgtttctta atcatgatca tcatccttgc
    11461 cgtcctggcg ctgattgtgg ttaaagccct ggccgaaagc ccgtggggtg ttttcaccgt
    11521 ttgctcaacc gtaccgattg cgctgtttat gggtatctac atgcgcttta tccgtccggg
    11581 gcgtgtgggt gaagtctctg tcattggtat cgtgctgctg gttgcctcta tctacttcgg
    11641 tggcgtgatt gctcacgatc cgtactgggg tccggcactg acctttaaag acaccaccat
    11701 taccttcgcg ctgattggct atgcgtttgt ttccgcactg ctgccggtgt ggctgatcct
    11761 cgcaccgcgc gactatctgg caaccttcct gaaaatcggc gttatcgtcg gcctggcgct
    11821 gggtattgtg gtgctgaacc cggaactgaa aatgcctgcg atgacccagt acattgacgg
    11881 tactggcccg ctgtggaaag gcgctctgtt cccgttcctg ttcatcacca tcgcctgtgg
    11941 tgcggtatct ggcttccacg cgctgatctc ttccggtacg acgccgaaac tgctggctaa
    12001 cgaaaccgac gcgcgtttca ttggctacgg cgcaatgctg atggagtcct tcgtggcgat
    12061 tatggcgctg gttgctgcgt ccatcatcga accgggtctt tacttcgcga tgaacacccc
    12121 gcctgctggc cttggcatta ccatgcctaa cctgcatgaa atgggtggcg agaatgcgcc
    12181 gatcatcatg gcgcagctga aagacgttac cgcacacgcg gcagcgaccg tcagctcctg
    12241 gggcttcgtg atttcgccag agcagatcct gcaaaccgcg aaagacattg gtgagccttc
    12301 tgtcctgaac cgtgcaggtg gtgcgccaac gctggcggta ggtatcgctc acgtgttcca
    12361 caaagtgctg ccgatggctg acatgggctt ctggtatcac ttcggtattc tgttcgaagc
    12421 cctgttcatc ctgaccgcgc tggatgcggg tactcgttct ggccgcttta tgctgcaaga
    12481 cctgctgggt aacttcatcc cgttcctgaa aaaaaccgac tctctggttg ccggtatcat
    12541 cggtactgcg ggctgtgtgg gtctgtgggg ctacctgctg tatcagggcg tggtcgatcc
    12601 gctgggcggc gttaagagcc tgtggccgct gttcggtatt tccaaccaga tgctggcagc
    12661 cgtagcgctg gtactgggca ccgttgtgct gattaagatg aagcgcaccc aatacatctg
    12721 ggtaactgtt gttccggctg tatggctgct tatctgcacc acctgggcgc tgggtctgaa
    12781 actgttcagc accaacccgc agatggaagg cttcttctac atggcaagcc agtacaaaga
    12841 gaagattgct aacggtactg acctgacggc gcagcagatt gccaacatga accacatcgt
    12901 tgtgaacaac tacaccaacg caggcctgag tattctgttc ctgattgtgg tgtacagcat
    12961 catcttctac ggtttcaaaa cctggcttgc ggtgcgtaac agcgacaaac gtactgacaa
    13021 agaaactccg tacgttccaa tcccggaagg cggcgtgaag atctcttcgc accactaacc
    13081 gtgtttagcc ccgcttcggc ggggctttgt tcttatcaga gtgaactatg tttggtaact
    13141 taggacaggc aaaaaaatat ctcggccagg cggcgaagat gttgattggc attccagact
    13201 atgacaacta cgtcgagcat atgaagacca accatcccga caagccgtac atgagctatg
    13261 aagaattctt ccgcgaacgc cagaacgcac gctacggcgg cgatggtaaa ggcggtatgc
    13321 gctgttgtta atggagagag catgaacccg attgcagtta ccctactcac cggtttttta
    13381 ggcgcgggca aaaccaccct gctgcgccat attcttaatg aacaacacgg ctacaagatt
    13441 gccgtgattg aaaacgaatt cggcgaagtc tccgttgatg atcaattgat tggtgatcgc
    13501 gcaacgcaga tcaaaacgct gaccaacggc tgcatctgct gttcgcgctc caacgagctg
    13561 gaggacgcgc tactcgacct gctggataat ctcgacaagg gcaatattca gttcgatcgt
    13621 ctggtcattg aatgcaccgg catggccgat cctggcccga ttattcaaac ctttttctcc
    13681 catgagattt tatgccagcg ctacctgctg gacggcgtga ttgcgctggt ggatgcggta
    13741 catgccgatg agcagatgaa ccagttcacc atcgcccagt cccaggtggg ctacgccgac
    13801 cgtattctgc tgactaaaac cgacgtcgca ggcgaagcag aaaaactgcg tgaacgcctg
    13861 gcgcgcatca acgcccgtgc accggtctac accgtcaccc acggcgacat cgacctgggc
    13921 ctgctgttca acaccaacgg ttttatgctg gaagaaaacg tcgtcagcac caaaccgcgt
    13981 ttccacttta tcgcggataa acaaaacgat atttcgtcga ttgtggtgga actggattac
    14041 ccggtagata tcagcgaagt ttcccgggtg atggaaaacc tgctgctgga atcggcggat
    14101 aaactgctgc gttacaaagg gatgctgtgg attgacggcg aacctaaccg cctgctgttc
    14161 cagggcgtcc agcgcctcta cagcgccgac tgggaccgcc cgtggggcga tgaaacaccg
    14221 catagcacga tggtgtttat cgggattcag ttgccggagg atgagattcg gtcagcgttt
    14281 gcgggactca aaaagtaacc agccctccaa catcacaata cctgagactt tatcaccctc
    14341 atattcctcc agaatatgag ggcattcggg cttaattatc tctgaacgtg caacacttcc
    14401 tgcgactcct tatgcgcctc cacatcctgc ttcgttaacc agagcgactt acgaccaaaa
    14461 ttttcgtaca ttttcagctg atcttcatag tgcttatcaa ctgttccatc gggagcaata
    14521 aacccactct gaccgggtgc gaccacatcc caggcaagca ccggacgatc gcttgtcgtt
    14581 ggtgagaaaa caatcatatc gttttctgtt ccacggtttt gatactccgc ctgatgacgc
    14641 gtttcttcca ctgcagcctg cggtacacca aagaaattat ttgcccggaa cgttaaggtc
    14701 attgcaggtg ttttccagtt actcacatta ttgccatagc gtttggaaag agtctcccag
    14761 gtatcttcca gcgcagccaa cacaacctcc tgctgtggtt tcccagcaaa cagatcaacc
    14821 gcctgtggga ttggtgattt gtctccctgc accgcctcat acaaaatttt tgctccaaca
    14881 cttatattca gcgaaccagt tgggccgtcc tgggttgttt cgtagccact ggcgctgtac
    14941 cacttatcaa atggcatagg tacggcagcc actacggtac gcttcaacat actggtcagc
    15001 caaacgttca ggatgacaga gcctggctgc tgccaggttt taccatcatc attaagcaaa
    15061 ttgatgccat cccaacgtgt taatgtatcc accaactgac ggcgcggatc gctctgtgtc
    15121 aaaccagatg tcgctgcttg cagagtaggt aaaaaaagcc tcaggttaag atcctgacga
    15181 ctggtttggc gaataacatc ccatgcctga tcagcagtta agcgtggctt ttgctcaagc
    15241 agtcggtcga tctccgtaac gcgatctgcc cccccccaca aaaaggcaaa cagatccgaa
    15301 gcgggataat ctttttgggg agaattgttc cagttagcaa tatatcccga cagggggtta
    15361 tacaccttag ggttcatttc aaaaggcaat agccctttcc agtcccattt tcccgtacca
    15421 ggaacgggta atcgcggatc atggcctgat tgacgatctg gataagcacc agtatgaaca
    15481 taaccaatat tgccgtttac atcagcatag taccagttga tggtcagtgc ttgtttcgct
    15541 gcctgctgtg tccactcctg ccaatttttg gccttcatct gatgagtcca ggccagcaaa
    15601 gacgccacct ctttaccatc ccatgcgcgg gatttagcgt aagccgtttg tgtcgtctgg
    15661 tcagtttgga gaatgttgcc atgcaccgta cgccagacag taaaggtctc tgcctgacca
    15721 tttttcaccg taatggtttc ctcacggctt aacattttca cccacttacc attatgcaag
    15781 tagtagcctg gtttctctgc cgacagccgt tcagcaaaaa tatcgacatc atcgccgaaa
    15841 cctgccgttg atccccagga aatcacacca ttatgaccaa aaaccagccc aggataggca
    15901 aatggtgtat tgccagtgac atcataacca gcaccgtgca gaccaatacc ataagtatac
    15961 gcaggcgcat accagccaaa ctgcggacca tttaccatga ttgctttcgc atcctgggct
    16021 ttgcttttgc cgatcaccca catattgctg gtcgttggat accccgccag accattggca
    16081 ccaccctgtg caaattgtgt agcaatagtt tcccggttct tccctgctgt taacgccagc
    16141 agtgcgccat ccgccccttt tgctggtcgg tcaagcattg gtgcaggtaa atcgtagcgt
    16201 ggcaacagag ctgctgtttg cgagttttgc tgattaaatt taagtgggta gctactctct
    16261 tgtacggcaa tagtggttgg cgctgatggg tttaccagcc atttcaactg attaaatacc
    16321 gccatgcctt gtgatacacc atatttatct tttaaagccg ttagcagtgc cagattatca
    16381 atttcgctag tgctatcaga gaagcggttt gccatggtgc ccacaaatat catcgcgaca
    16441 tcaaacggtt cccagcgctt aggagtaaag ccaaatgtat taaactgttt tggtaagagc
    16501 gtctctggat tggtacttac cttatcaatc caggcattca ttccatcagc gtagccttgc
    16561 agaatggaca tatcctctgg ggaaagggca gcaatttgcg cccggatagc atccggccag
    16621 tagttacgac ggatatcttt atcaaatttc acaaaatctt tgccaagcac ttccgcgaca
    16681 gtcccttgag tactgcgacg tgccatttcc atctgaaaaa ggcgatcttg tgctactaca
    16741 tagccatagc cataaaatag gtgccatgta tcattggcat aaatatgcgg catgccgtat
    16801 tcatcgcgaa caatctttat ctcacttgac gactgctcag ccagtgcagg taagctccaa
    16861 taatacatca gggaagcagt aacacagttc acgatcatac gatttctatt tttcattgta
    16921 tcctctggca ggtgtataat tagcgaattg atactagcaa cgaagcttag gttatctatt
    16981 tgcagagaat tgtttcatta tgaactgtga gcgcgataac taatttttga tacaaaaatt
    17041 tcattaatgt gatctaaaac gaatcgcttt attcaccgct gatgattttg ttctattcct
    17101 ttttgtgaca gatcccccgg acgcatagat gatgaccccc agagagacag ctcaggtcat
    17161 tatctgtatg taaatcagaa aaatatgttg taaacgactt ttatggttgg attttgtagc
    17221 aattttgaat gcagacaggc agcatttgcc aacacgccgc ccatagttca ctccacatcc
    17281 tccctgcgta acccgatatc cctcaaccgt tcatcactca tctgctgtaa cacccgtcgg
    17341 gcctgcattt gccgccgcca acgcctcacc gcctgccaga gttgcacaag tctgataaac
    17401 ggcgttttgg ctttgttttc gtgaaattcc atctgctgcc tcctcatctt tcagaggctt
    17461 catcatccgt cttctggcag ttcacaatac agatgcaaat attagtttta tttaacatac
    17521 agacaggtta aaacagcatc tgcatccggt tttttagcct catctgtacc ggtttttctc
    17581 tctgtatggt ccaaataagg aatacagcat gacgcgttat caacatctgg caactctgct
    17641 tgccgagcgg attgagcaag ggctgtatcg tcacggggag aaattgccgt cggtgcgcag
    17701 cttaagtcag gagcacggcg tcagcatcag caccgtgcaa caggcgtatc agacgctgga
    17761 aacgatgaag ctcatcactc cgcagccgcg ttcgggttat tttgtcgcac aacgtaaagc
    17821 ccagccgcct gtaccgccga tgacgcgtcc ggtgcagcgc ccggtggaaa ttacccagtg
    17881 ggatcaggtg ctggatatgc tggtggcgca tagcgacagt tccattgttc cgttaagcaa
    17941 aagcacgccg gatgtcgaaa cgcccagcct gaaaccgctc tggcgggagc taagccgggt
    18001 ggtgcagcat aatctgcaaa ccgtgctcgg ttatgacttg ttagccggtc agcgggtatt
    18061 gcgagagcag attgcccgcc tgatgctcga cagcggctcg gtggtcaccg ccgatgacat
    18121 catcatcacc agcggctgcc ataactcgat gtcgctggcg ttaatggcgg tgtgtaaacc
    18181 gggcgatatt gtcgcggtcg aatctccctg ttattacggt tcgatgcaga tgctgcgagg
    18241 catgggcgtg aaagtgattg aaatcccaac cgatccagaa actggcatca gcgttgaagc
    18301 actggaactg gcgctggaac agtggccgat taaaggcatc attctggtgc caaactgtaa
    18361 taatccgctg ggatttatta tgccggacgc acgcaaacgg gccgttctct ctctcgctca
    18421 gcgtcatgat attgtgattt ttgaagatga tgtctacggc gaactggcga cggagtatcc
    18481 gcgcccgcgg accattcatt cctgggatat cgacgggcga gtgctgttgt gcagctcgtt
    18541 cagtaaaagc attgcacctg gcctgcgcgt gggttgggtc gcaccggggc gctatcacga
    18601 taaactgctg catatgaaat acgccatcag cagctttaat gtaccgtcca cgcaaatggc
    18661 ggcggcaacg tttgtgctgg aaggtcacta tcatcgccat atccggcgga tgcggcagac
    18721 ttatcagcgc aatctggcgc tttatacctg ctggatacgg gaatattttc cctgcgaaat
    18781 ctgtattacg cgcccgaaag gcggattttt actgtgggta gaattgcctg aacaggtcga
    18841 tatggtctgc gtcgcgcggc agctatactg catgaaaatc caggtggcgg caggctcgat
    18901 tttctcggct tccggcaaat accgtaattg tctgcgcatc aactgcgctt tgccgcttag
    18961 cgaaaccaat cgcgaagcac taaagcaaat tggcgatgcc gtgtatcggg caatggaatg
    19021 aattcaaatt agtgccgagg cccctgattt actctcacga ataacctgtg actcgtttta
    19081 tctttatagc gacatcgcca cgttccggca tggcttaggc aaagtgtgct tcgttcatgc
    19141 cagatgccat gtgaacgcct taccaggtct acaaaatatt aaaagttcaa tatatttaat
    19201 ggattatgta g
//
LOCUS       DAPGWB010000082        19096 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.082, whole genome shotgun sequence.
ACCESSION   DAPGWB010000082 DAPGWB010000000
VERSION     DAPGWB010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 19096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19096
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.082"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            264..1247
                     /locus_tag="RHX79_002784"
     CDS             264..1247
                     /locus_tag="RHX79_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParM/StbA family protein"
                     /protein_id="HDV2197937.1"
                     /translation="MSQFVLGLDIGYSNLKMAMGYKGEEARTVVMPVGAGPLELMPQQ
                     LTGGAGTCIQVVIDGEKWVAGVEPDRLQGWERELHGDYPSTNPYKALFYAALLMSEQK
                     EIDVLVTGLPVSQYMDVERREALKSRLEGEHQITPKRSVAVKSVVVVPQPAGAYMDVV
                     SSTKDEDLLEIIQGGKTVVIDPGFFSVDWVALEEGEVRYHSSGTSLKAMSVLLQETDR
                     LIQEDHGGAPGIEKIEKAIRAGKAEIFLYGEKVSIKDYFKKASTKVAQNALIPMRKSM
                     REDGMDADVVLLAGGGAEAYQDAAKELFPKSRIVLPNESVASNARGFWFCG"
     gene            1264..1557
                     /locus_tag="RHX79_002785"
     CDS             1264..1557
                     /locus_tag="RHX79_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197938.1"
                     /translation="MAGSKWDGKISNLNISEQAFPELYRELSQMQHKARSDRLRALAL
                     LGLYSLRFSGNIGSFEQQSSESQPAQHQNSPVQTDAKLNSQRDSLKGKLMGSV"
     gene            1559..1978
                     /locus_tag="RHX79_002786"
     CDS             1559..1978
                     /locus_tag="RHX79_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H-NS histone family protein"
                     /protein_id="HDV2197939.1"
                     /translation="MKDHEEFSTLSAAERRELIIAELKRKSRIRTLLRGLPLDEVREI
                     IDRMKGVLNELEEEYKKREEEEKEKRAQAERIMSDMESCGVDIGLLNEMFTSRSEPDN
                     AKYSKDGVSWSGQGRRPDAFKGLGAVELERYRIPQKK"
     gene            complement(2038..2589)
                     /locus_tag="RHX79_002787"
     CDS             complement(2038..2589)
                     /locus_tag="RHX79_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HDV2197940.1"
                     /translation="MNIGNSGTLGRWVTARHMALAGYITKIIMIETGLTYKQVRRLYQ
                     DLERDGYTLERKSRTFRGGATLIHSHTSKIQASLLMQLYFNIGGEAVLRSVNIKALNK
                     AFRMYHAIRKEVPGMKGARWAPFDITDAWCLASELRSGDAMLEVCDNCKCTYFTSVNQ
                     RTCVECPFCKEQGRHGGGEKECA"
     gene            complement(2586..3194)
                     /locus_tag="RHX79_002788"
     CDS             complement(2586..3194)
                     /locus_tag="RHX79_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV2197941.1"
                     /translation="MLELDIIGAWDARAVNLDQEEADRNVYEFDLTLWNLLSTLAKER
                     PDDAASQFSLGMDTVQKLSLATPSQLEALASGVLISFKLETAEQNIITRLSGDYDPVV
                     FINHSVDEFDAAYWLLFNRVASRDPEMAKEVFGVSRELAELVAKATDSQLRHMSGTTV
                     THFTLRFAPSIIEEILDDSREELTHPVLKKLQQSLQGRGRWR"
     gene            complement(3205..3738)
                     /locus_tag="RHX79_002789"
     CDS             complement(3205..3738)
                     /locus_tag="RHX79_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDV2197942.1"
                     /translation="MKNKAKALVLSAALLSSTANAIDLSGTIFDKAAKAYNLDPLLVY
                     SVALAESASGRGNGSISPWPWTLRVPGLPFYAKSEDQAKAKLAEFQQQYGRAIDVGFM
                     QVSIRWNGHRVSSPADLLDPETNVMVGAEVLSEAIQSSPNDLELGVGRYHAWEDEIRA
                     RNYGSRVLAIYRNLRDL"
     gene            complement(3738..4010)
                     /locus_tag="RHX79_002790"
     CDS             complement(3738..4010)
                     /locus_tag="RHX79_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2197943.1"
                     /translation="MDKCQLIDIPSDPEKKREWIKYKLKIQGLSLAALGRKHKTSRQV
                     VSTALYKPSPRWEHEIATALGVKPSEIWPERYDEEHEIPLRHKEAS"
     gene            4726..5088
                     /locus_tag="RHX79_002791"
     CDS             4726..5088
                     /locus_tag="RHX79_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HDV2197944.1"
                     /translation="MKHVVNILLLGMVLLGIAMMADTPWGLGVAQAPFGVWGARFLFL
                     VHKSLWAAVIFWGGIAYFQWQVALVVGALFGLTCFIRVARSAYKEAPPTRRRKKQTGG
                     FQDSYDFDQRFHIGAGDE"
     gene            complement(5126..8740)
                     /locus_tag="RHX79_002792"
     CDS             complement(5126..8740)
                     /locus_tag="RHX79_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDV2197945.1"
                     /translation="MGSFSIHSIGDSAFLEQILIAVSMITGTGDFEKMVSIGLLLGVL
                     MICIQSVFQGAKQINLQQVLVGWILYACFFGPTTTVTIEDAYTGQVRVVANVPIGVGF
                     AGGVISNVGYTITNLFETGYGVIVPNVTESHFSETLKLLNDVRRRAYDTGVFTALNSA
                     NGGGYVDVRRSWNNYIRECTLTKVDLNLMSLDELMNRSTDSALRFNSQLYGTRLYLST
                     ANPDGADYTCTDGWVAISTATANLSSPVVVDALNSLLGIDTSTGDNALTKLTDSLQAM
                     GATTTSSIDYLKAAVLEPLYYEAAAGRYQDLQDYGSALMVNQAIQQRNTQWAAEQSMF
                     MTVVRPMLTFFEGFIYAITPIIAFIIVMGSFGLQLAGKYVQTILWIQLWMPVLSIINL
                     FVHTAASNEMSSLSAGGLNSMYALSSTGDVLQHWIATGGMLAAATPVISLFIVTGSTY
                     AFTSLASRISGSDHVDEKMQTPDLLKQGPVMQSQPAYNHNQFSGAIANGAESMISTFS
                     LGSTLASGVSSAQALQSQKSEAFQSTLGRGFSDGVSQDQAYSRLSNVGRNVSSQNTAQ
                     SQLINQQAKNFMDKFQVDDSHSDAVKGAFAMQAMGTLDVDEAASMLMPMVGKARAAMK
                     AAAGVKSNSTALVPAGGNGESGGGSDVLDIKAQAKGATESSTQDSSSWSASDVSQFMK
                     GVSYSQTDSQALTNQLAQGFSRSGSESFKQTWGDSLSQNLSKSASELVSASDTFTTMS
                     QLQNQMGSMTNTDFKTLGGAVAQTPAAMNQLNDYFRNAAPQSVKDEAASLQQRYQAYG
                     MSPQVAQAAARMTAMTNSKNYEQGKELGGYQAALQAINTASGRNGAFSGDAYGNNGIE
                     GPNVQGLPGQVQGAVGSGPNIPTGFRENVAGMAGTNPASEAGQLPTNSPLVQNEHAAG
                     TSALHNQAQQTERNVSAPELKKAQDNLMNSLPEMSWSASAWGAWDNSSDWMGRRAEQA
                     GGALIAGGQAGADAFSRAMDQMRTMTPEQRDQFIAATQRGDQAVQEEFGWAGDAMVGM
                     AKLGRNVMGAAASGYDAAKEWLTGKSDLSEAAKGMSIEERGAFYAAALSSAAEAGGGA
                     AQQFMNQYGDEFKETMQSIAQSRYGLTESQAAVYAESFDTNEGRMNQAVQNLKMEYAE
                     RNPDGSPMMQGGQPVLSQQNEEFTDKLVNVLQNSTEAGDRSGSYLTAVRGYNIANQRF
                     "
     gene            complement(8753..10186)
                     /locus_tag="RHX79_002793"
     CDS             complement(8753..10186)
                     /locus_tag="RHX79_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraH"
                     /protein_id="HDV2197946.1"
                     /translation="MVTHKTLKRSLLALSVAASLVMAPTGAIAANGLQSQMDKLFNEM
                     SNTTPPGVYESQRRGVLAGGRFTAKTRIFDENLVSFAPPSWKAGCGGVDLFGGSLSFI
                     NADQIVQLLRAVAANAKGYAFQLALDNVFPDGAKWIENFQKKVQALNQHLGNSCQLAQ
                     GFVNDLTSGMDLKHKTDASITATTSGLYEDFFGSKQETSGKSPLEELKANKPDEYNKM
                     IGNIVWKQLKSNNANTWFQYGDNTLLEAIMSLTGTVIIGDLVNDPNSTGTGAKTTPLT
                     TLPGNKITLSDLISGGSVEIYSCDSDTTNCLSAGSSNKTVVLKGIKNQITDMLLGTSS
                     TPGVIYKYATNSGTLTDPEKAFVSNLPGGIGTIVRNLSVLSQDGANLFATESSGAIAL
                     TMMYSFSEEFFRAARIAMANSKSPYKKEALELLAQSQQQIRAEYTILSSQYGDLASQI
                     EKYNNLLDNIRKQKYMLATLSNPPSTN"
     gene            complement(10188..11228)
                     /gene="traF"
                     /locus_tag="RHX79_002794"
     CDS             complement(10188..11228)
                     /gene="traF"
                     /locus_tag="RHX79_002794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HDV2197947.1"
                     /translation="MGKYVRETMKKSPLNLLLLAALTLGASHQAWAQDGTRPGFYERK
                     EEGWFWYKEEPKEPEKKPEKPKPKPVAEAKPTQPKPAAPLPSGPEMFSAEWFRENLPK
                     YKDLAWNNPTVENVRTFLYLQRFAIDRSEQFSDATELAVVGDPFLDEITRRPAATFAS
                     QQVDRDAGNAKNMLLKSVAERVGIFFFYKSDDDYSDLQAPLIKMLEQGEGFSIIPVSM
                     DGKPLPSGLFPHYKTDEGHAKQLGIVTFPAVYLASPDGQFAPIGQGPMSLPELNHRIL
                     VAAKRNGWVTDEEFNRTRPVLNLENNIAERLASPELGSDLKQLSQASGDKDNFVPPEQ
                     LMKYIRDKLQEN"
     gene            complement(11339..12850)
                     /locus_tag="RHX79_002795"
     CDS             complement(11339..12850)
                     /locus_tag="RHX79_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HDV2197948.1"
                     /translation="MKQLPPDTPEQSLITQYKGPRLVVKAYAGTGKTTTLVKYAHNNL
                     DSRILYLAYNRAIRDEAREKFPANVDCKTSHQLAYATIGRGYQHKLSGNLRLTDIAQA
                     VNTKNWTFAKDILDTLNAFMCSADMRILYTHFARADTGKVLTSKQERYQIQVVEGAEL
                     IWKRMTNVQDPFPTVHDCYLKQYQLGMPNLSRRYTTILFDEAQDANPVTSSIVLQQNC
                     KVILVGDRHQQIYRFRGANNALDSKELMNADQLYLTHSFRFGPNVSLVANALLELKGE
                     TRPVVGRGPADQVLMFLPGDVGHRAILHRTVMGVIETALSATESGAQVFWVGGIDAYQ
                     INELQDLYWFSMAEPDRVKNKKLLDEYEDYFEYQEVAKATKDPEMMRAVKIINSYDEI
                     PERLTTLRRNTVKEEFGADITVSTAHRCKGLEWDFVQLYDDFPDVLDPELDPMARDDE
                     INLLYVASTRAMRILALNSAVEMVIRYITQKRMVEKQMKMAAEATEVEEDTTK"
     gene            complement(13137..14177)
                     /locus_tag="RHX79_002796"
     CDS             complement(13137..14177)
                     /locus_tag="RHX79_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDV2197949.1"
                     /translation="MARKLVEFDDVAAAAQKLKDAGKRPTVIAIRDIIGKGSFTTIST
                     YLKQWSEEHSLDEELVEVVLPESVMSDAELFLQKIYTVAKASADEQLERERELLRQKE
                     IEYQEDMQQAVDMANDATERAELLEEQLEALTNKKSELDAALGKAENSLSLKSAELER
                     SLADIDKLEKRIVELEGKLEAKAADLTRAQDHLEQAKSENRSLSQKLATTEGELEEQK
                     GKSIEQTEKLRAAQEQKTSLKEQLENVQAKLAQSQDSLATAKAHGESAERECQRLSGE
                     VEKLDAKLSSAEAEARALVQDKGMMAGQLQEKDQQAKSLEQRLNDALTKISGLEQELA
                     KAGKGGKKKEEN"
     gene            complement(14339..15214)
                     /locus_tag="RHX79_002797"
     CDS             complement(14339..15214)
                     /locus_tag="RHX79_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication terminus site-binding protein"
                     /protein_id="HDV2197950.1"
                     /translation="MAKNFISEQFSAMCRDLTNLSSLIKRLPPRYAKVAAIPPTGKGM
                     ENEPVNKIVVTEQTGREALELAAHSYRDLHINPDYSQKSARRTVGVLWFSPSRIGVAD
                     EIAATVERINAAKAGIEEFIISTYPTRQERFEALRADCPGVMTLHLYRQIRCYTNGDI
                     DSIRFTWQRKDSLKKPVKEELLQRIREELERSGPDYQLPLEQLIQKIASTPEPYLRER
                     REVKVQPVANVMAAGVLKTVTAPMPLIVLQDKDVQLKLLRNFDASEQRKTRSDKAASE
                     ILGTFGGVTIESFPG"
     gene            complement(15541..16032)
                     /locus_tag="RHX79_002798"
     CDS             complement(15541..16032)
                     /locus_tag="RHX79_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197951.1"
                     /translation="MTEQSYGESLKFFSDWQKDPAKRTGLNVQHTLTRGEYPTVSIEI
                     APIRASGSSPDWKSKITVQLTRGELTAFCSVLFGLRSKAEGSYHGDAKNKSFAVYNNG
                     KAGVAIILSERGNQLQNFINDDDRMELAVFAVRQLSNAWKVTPSDAIALLRQSAWMDR
                     NLS"
     gene            complement(16029..16859)
                     /locus_tag="RHX79_002799"
     CDS             complement(16029..16859)
                     /locus_tag="RHX79_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDV2197952.1"
                     /translation="MKADRCFSKGRLRDEFRMKPKPGVEPVSFYKNGYGGQFGVYRIA
                     DCQPMRRRGCSPASQKQIRAQSILSVKARMRSNLAKASVMAQRWVALEPLVLDTETTG
                     LGERDQVIELAVTDIRGAVLLCTRLRPTVEIDPQAMGVHGITETELSNEPTWTQVAPA
                     LARLLSGRHLVIFNPSFDSRMLRQTASAFGDQLSWWQEQNCLCAMKLAADAFGSTNRH
                     GTISLADATCEAGVSWKGRAHSAATDAIATADLVTEIAKVQRDLVVQLQELQSKGNLE
                     "
     gene            complement(16905..17915)
                     /locus_tag="RHX79_002800"
     CDS             complement(16905..17915)
                     /locus_tag="RHX79_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDV2197953.1"
                     /translation="MHDTNNDKEELVSHAKVNVPAEQSIRGELLPSSSSLRNIQDNPA
                     VAYLVSLGSKRSRQTMSSFLNIVAKMIGFQNLRDCAWSSMRRHHILAVLEMLGDAGKA
                     PATINTYLSALKGVALEAWTMKQIDTDSFQHIKQVRSVRGSRLPKGRALERHEIRSLF
                     FTCESDSSAKGLRDAAILGVLLGCGLRRSEIVALDMGSMIYKDRALKVLGKGNKERMA
                     YVPGGAWKRLDKWVEEVRGTHEGPLFPRIRRFDDVTGERMSDQAIYHILETRRVEAGL
                     EMFAPHDLRRTFASSMLDNGEDIVTVKDAMGHSSIATTQKYDRRGDERLKRASQRLDI
                     AD"
     gene            complement(17918..18454)
                     /locus_tag="RHX79_002801"
     CDS             complement(17918..18454)
                     /locus_tag="RHX79_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197954.1"
                     /translation="MLSKKVFFISQAEAERLEPVPGAAMISITDPDKSPAALGQWGQL
                     YRDSFYDGGYSENTIHTMKAAFRMNYASYIDSSQAEKLSTFLDGLVGSGIDQIFVHCY
                     YGESRSGAVALYLQNKHGFTPNKPITKPNRTVYELLCNPTKFEPLMQSYETQHMEEEL
                     PLHLKIWDFLLVAVGLRR"
     gene            complement(18753..19034)
                     /locus_tag="RHX79_002802"
     CDS             complement(18753..19034)
                     /locus_tag="RHX79_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197955.1"
                     /translation="MIFDVRATFEVALQTDTHLVLIDLDQGASVTNDADAVIAWLAAN
                     LEGGIGKRKVYYRDTDGRFDELKVNAGAFAGFAPCSEGQQTTLAGMLGQ"
BASE COUNT         4338 a         4779 c         4870 g         5109 t
ORIGIN      
        1 tccaaatgcc tctttaccac cgtctctcga tgctggaggg caagcggttc tcgatgcgag
       61 ggtaaggtct gtttatctga gcctatccgt gcagcgttcc cataggttcc cttactcaac
      121 gatcaaaaag ccaccgaaaa gcaacctata tgcccctttt gggcaattac acaggccatc
      181 tgtccccgct tttagcctta ttctctatcc aacacgcggc aagcaatcga aaagcaatct
      241 aaaagcaatc tttggaggat ttcatgagtc aatttgttct gggtttggat attggttact
      301 ccaacctgaa aatggcaatg gggtataaag gtgaggaagc tcgcacagtc gtcatgccgg
      361 tgggggcagg tccattggaa ctgatgccac aacagttaac tggcggtgca gggacctgca
      421 ttcaggttgt gattgatgga gagaaatggg ttgcaggcgt cgagcctgac cgattgcaag
      481 gatgggagcg tgagcttcac ggcgactatc cttcgaccaa tccatacaag gctcttttct
      541 acgctgcact cctgatgtcc gagcagaagg agatcgatgt gctggtgact ggcctgcctg
      601 ttagtcagta catggacgta gagcgcagag aggcgttgaa atctcggctt gagggtgaac
      661 accagatcac gccaaaacga tcggtagcgg ttaagtctgt cgtggttgta cctcaacctg
      721 ccggtgctta catggatgtt gtaagttcaa ccaaagatga agacctcctg gagattatcc
      781 agggaggaaa aaccgttgta attgaccctg ggttcttttc tgtagactgg gtagctcttg
      841 aagagggaga ggtccgctat cactcatctg gcaccagcct caaggcgatg tcggtgttgc
      901 tacaggaaac ggaccggcta attcaggaag accacggcgg tgcccctggc atcgaaaaga
      961 tcgagaaagc tattcgtgcc ggtaaggccg aaatcttcct ctacggtgaa aaggtatcga
     1021 tcaaagacta cttcaagaaa gcctcaacca aagtcgctca aaacgccttg atccctatgc
     1081 ggaagtcaat gcgtgaggac gggatggatg ctgacgtagt tctgctggct ggcggcggtg
     1141 ccgaggctta ccaagatgcg gccaaggagc ttttccctaa gagcaggatc gtactgccca
     1201 acgaatccgt ggcatccaat gccaggggct tctggttctg cggctgatag ataggaggtc
     1261 gttgtggctg gtagcaaatg ggatggaaaa atatctaatc tgaacatatc ggagcaagcc
     1321 tttccggagc tctatcgtga actgtcccag atgcagcata aggcgcgtag tgatcggctc
     1381 cgcgcccttg ctctattggg tctttattct cttcgatttt ctggcaacat tgggtctttt
     1441 gagcaacaga gttcagagag tcaacctgca cagcatcaaa attcgccagt gcagactgac
     1501 gcaaaactga actctcaacg tgattcactt aaaggaaaac tgatgggctc cgtatgacat
     1561 gaaagaccac gaggagttct ctacgctatc agcggctgaa cgtagagagt taataatcgc
     1621 agagttaaag cgtaaaagcc gcattcgcac cctgttgcga ggactcccgt tagatgaagt
     1681 tcgggagatc attgacagaa tgaagggcgt tctcaatgaa ctggaggaag agtacaaaaa
     1741 gcgagaagaa gaagaaaaag aaaagcgagc tcaggctgag cgaataatga gcgacatgga
     1801 atcctgcggt gtggacatcg gcttgctcaa cgaaatgttc acgagcagat cagaacctga
     1861 taatgctaaa tattcaaaag acggagtttc gtggagtggg caaggacgtc gcccggatgc
     1921 tttcaagggg ttgggagctg tcgagctgga gcgctaccgt atcccacaga agaagtaaaa
     1981 aaatgagcgc cgcaaagttt gggcgctcat cttctggtcc gaaatgtcat agtctactca
     2041 agcacactct ttctccccac caccatgcct tccttgttct ttgcagaacg gacattcaac
     2101 gcaggttctt tgattaacag aggtgaagta cgtacacttg cagttgtcgc acacctccag
     2161 cattgcgtcc ccacttctca gctccgaagc aagacaccag gcatcagtaa tatcaaacgg
     2221 agcccaccga gcacctttca ttccgggcac ttctttgcgg attgcgtgat acattctaaa
     2281 tgccttgttc aaggctttga tgttcacaga ccgcaacacg gcttctccac caatgttgaa
     2341 gtagagctgc attagaagag aggcctgtat cttggatgtg tgactatgaa tcagtgtcgc
     2401 accaccccgg aaagttctgg attttcgttc cagagtatat ccgtccctct ccagatcctg
     2461 gtaaagccgt ctgacctgtt tgtaggtcag accagtctcg atcatgatga tttttgtgat
     2521 gtacccagca agggccatgt gtcgagctgt aacccagcga cccaatgtac cagagttgcc
     2581 aatgttcatc tccacctccc acgtccctgt agagactgtt gcagtttttt caataccggg
     2641 tgtgttaact cttcccggct gtcatcgaga atttcttcaa tgatgctcgg agcaaaacga
     2701 agcgtaaaat gcgtaaccgt tgttccagac atgtggcgca actggctgtc tgttgcctta
     2761 gccaccagct ccgcaagctc tctcgaaacc ccgaaaactt cctttgccat ctccgggtct
     2821 ctcgatgcga cgcggttaaa tagcaaccag taggcagcat caaattcatc aacactatgg
     2881 ttgataaaaa ctacagggtc gtagtcgcca gagagtcgcg tgatgatgtt ctgctctgct
     2941 gtttcgagtt tgaaagagat caacacgcca gaggccagag cttccaattg ggaaggtgtt
     3001 gccagtgaca gcttttgaac ggtgtccatg cccaaagaaa attgtgaggc cgcatcatct
     3061 ggacgttctt ttgccagagt ggatagcagg ttccacaatg tcagatcgaa ctcgtagacg
     3121 tttctatcag cttcttcttg atcgaggttg acggctcttg catcccacgc accaataata
     3181 tccagttcca acattccgcc cccctcacaa atcacgaagg ttgcgataga tagccaagac
     3241 tcggctacca tagtttctgg ctcggatttc gtcttcccag gcgtgatagc ggccaacgcc
     3301 aagctccaag tcatttggag atgactgaat ggcttctgat agcacctctg ccccaaccat
     3361 gacgttggtc tctgggtcga gaagatctgc tggagaagaa actctatgac cattccaccg
     3421 gatgctcact tgcataaacc cgacatcaat ggcacgaccg tactgctgct gaaactcagc
     3481 gagcttagcc tttgcctgat cttccgactt agcatagaaa ggaagcccag gaacgcgaag
     3541 cgtccaaggc caaggactta tagagccatt acctctccct gatgcagatt cggccaatgc
     3601 gaccgaatac actagaagag ggtcgaggtt atatgctttc gctgctttgt cgaagatggt
     3661 tccgctcagg tcaatagcat tcgctgttga tgaaaggaga gccgcagaca gaactagcgc
     3721 cttggctttg ttcttcatca gcttgcctcc ttatgtctga ggggtatttc gtgttcttcg
     3781 tcgtaccgct ccggccaaat ctcagacggc ttcacaccca aagctgtagc tatctcatgt
     3841 tcccagcgtg gactgggctt atagagtgcc gtagacacca cctgccgaga tgttttgtgt
     3901 tttctgccca atgcggccag agaaagcccc tggatcttga gtttgtactt gatccactca
     3961 cgtttcttct ctgggtcgct tgggatgtct atcaattggc atttatccat tgtttgccac
     4021 cctttaaact gcgttgttag ccatacaaaa agtgcgttat tcgatgaacg cttttagagt
     4081 tcttctattg tcacaaactg acacattttg cgcctttaca agcccaaata atgatgctgt
     4141 caacaataaa aaacctttaa aaacatacac ttaactttgt accgacggaa caaagttaca
     4201 atacttttag taatcaatgg gatacggata tttttgcgat agtaatggaa agtgcgccaa
     4261 aagaatggcg gaaatagcgc acggggagtg cggtattttg tgatattaaa tagcgtttag
     4321 gtataagtga ttttagggat acagcgaggg ctgaaattgc gaatacagca ggagctgagg
     4381 agggcaggga aggcaaaggc gcatcccgac cacacaagga tgatggtgtt tacagaaaga
     4441 gatatttgag aaagagaact ctgcggtgtt gcagatgggg accaaagcgt tagcaatggc
     4501 ctattccata gtgtatgcga tttgtttgac atgttcaact atgtaatgct ttgtcaataa
     4561 acgccttgtt ccgtaagggc aaactttcac atgtgaaagt ttgagggcaa attctaatcg
     4621 aagaagttgc caatggaatg gttgtttagc aaaaaatagt caaactttca cagttgcatt
     4681 ttttgatgcc gtggtaaact ggaggtaaag agtaaggggg ttgatatgaa acatgtggtc
     4741 aatattcttc tgctgggaat ggtgcttctg ggaatagcca tgatggctga cacaccttgg
     4801 ggacttggtg tggcgcaggc tcccttcggc gtttggggtg ctcgtttcct atttctggtt
     4861 cacaaaagcc tttgggctgc tgttatcttt tggggaggga tcgcttactt ccagtggcaa
     4921 gttgctttgg ttgtcggggc tctgtttgga ctaacgtgct ttatccgcgt tgcgcggtca
     4981 gcatataaag aggcaccacc tacccggcgc agaaaaaaac aaactggtgg gtttcaagat
     5041 tcctatgatt ttgaccagcg cttccatatt ggagctggag acgaataagg gggcctgctg
     5101 gcccccttat tatttggttg gtcttttaga acctttgatt tgctatgttg taccccctga
     5161 cggcagtcaa atagctacct gaacggtctc cagcttccgt cgagttctgc aatacgttta
     5221 ccagcttgtc cgtaaactct tcgttttgct gagaaagaac aggctgacct ccttgcatca
     5281 tcggtgagcc atccgggtta cgttctgcat actccatttt cagattctga acagcctggt
     5341 tcatgcgacc ttcgtttgtg tcaaacgatt cggcataaac agcggcttgg gattcagtca
     5401 gcccataacg gctttgagcg atagactgca tcgtttcttt gaactcatca ccgtactggt
     5461 tcataaactg ctgcgcggct ccaccaccag cttctgcggc agaggatagc gctgctgcat
     5521 agaacgcgcc gcgttcctca atgctcatcc ctttagcggc ttccgataga tcagatttac
     5581 cagttaacca ctccttcgct gcatcatagc cgcttgcagc agctcccatg acgttgcggc
     5641 caagtttagc cataccgacc atcgcatcac cggcccagcc aaactcctct tgcacggcct
     5701 ggtcgccgcg ttgagtggcc gcgatgaatt ggtcgcgttg ttcaggtgtc atcgttctca
     5761 tttgatccat cgctcttgag aacgcatcag cgccagcttg accaccagca atgagagctc
     5821 cacctgcttg ttcagctctg cggcccatcc aatcactgga gttgtcccac gctccccacg
     5881 ccgaagcgct ccaagacatt tccggaagcg agttcataag gttatcttgg gcttttttca
     5941 gttcaggagc agatacattt cgctctgttt gctgtgcttg gttatgaaga gctgacgtac
     6001 cggctgcatg ttcattttga acaagggggc tattcgttgg taactgccca gcttctgatg
     6061 ccggattagt tccagccatc ccagccacat tctcccggaa tccggttggg atgttaggtc
     6121 cactgcctac agccccttga acctgacctg gtaggccttg aacattcggg ccttcaatgc
     6181 cgttatttcc gtaagcatca ccactaaatg ctccgttgcg accggacgcg gtattgatcg
     6241 cctgtagtgc ggcttgatac ccgccaagct ccttaccctg ttcgtaattt ttggagttgg
     6301 tcattgctgt cattcgcgct gctgcctggg ccacttgagg agacattccg taggcttggt
     6361 atctttgctg tagtgaagcc gcctcgtctt taaccgattg cggcgcggca tttcggaaat
     6421 agtcattcag ttggttcatg gccgcagggg tttgtgctac tgcaccaccg agagttttaa
     6481 agtcggtatt agtcatggag cccatttggt tttggagctg actcattgtt gtgaaggtgt
     6541 ccgatgcaga caccagttca gaagcggact tggataggtt ctgggataag ctatcgcccc
     6601 aggtttgctt gaatgactcg cttccagaac ggctgaaacc ctgcgctaat tgatttgtca
     6661 acgcctggct atcggtttgc gaatagctca cacccttcat gaactgggac acatcactcg
     6721 ctgaccagct tgaagagtct tgagttgatg actctgttgc tcccttcgct tgcgctttga
     6781 tgtccaggac atcactgccg ccgcctgatt cgccattacc accagcagga actagggctg
     6841 tactgtttga tttcacacca gcagcggcct tcattgctgc cctggccttg ccaaccatag
     6901 gcataagcat ggacgcagct tcgtcaacat cgagtgtgcc catagcctgc atggcaaaag
     6961 cacctttgac agcatcagag tggctatcat ccacctggaa cttatccatg aagttcttgg
     7021 cttgctggtt gatcaattgg ctttgagctg tgttttgcga cgaaacgttg cgcccgacat
     7081 tggagagtct tgaataggct tgatcctgac ttactccatc agaaaaacct cgaccaagag
     7141 tgctttggaa agcctccgat ttctgacttt gtaatgcctg tgcggagctc acgcctgatg
     7201 ccaaggtgga gccaagcgag aaggtactga tcatgctttc tgcgccgttt gcaatcgcac
     7261 cactgaactg gttgtgattg tacgctggct gactttgcat aaccggacct tgcttgagta
     7321 gatctggcgt ttgcatcttt tcgtcaacgt ggtcagaacc acttattctc gatgccaagc
     7381 tggtgaaggc gtaggtgcta cctgtgacga taaacaggga aatcaccgga gtggccgcag
     7441 ccaacatgcc gccggttgca atccagtgtt gcagaacatc tccagttgag gaaagagcgt
     7501 acatggagtt gagaccacca gcactgaggc tagacatctc atttgacgcg gcggtatgaa
     7561 caaacaggtt tataattgag aggactggca tccatagctg aatccagagg atggtttgta
     7621 catatttccc ggctaactgg aggccgaagc tgcccatcac gataataaaa gcaatgatcg
     7681 gggttatagc ataaataaag ccttcaaaga acgtcagcat tggtcggacg acggtcatga
     7741 acatcgactg ctctgcggcc cactgtgtgt tccgttgctg aatagcctgg ttgaccatca
     7801 atgcagagcc ataatcctgg aggtcctgat aacgtcctgc tgcggcttca taatagaggg
     7861 gctccagaac ggcggctttc agatagtcga ttgatgacgt agttgtggca cccatcgctt
     7921 gaagcgaatc ggtcagcttc gttagagcgt tgtctccagt tgacgtgtca atacccagta
     7981 ggctgttaag agcatcaaca acaaccgggc tgcttaggtt ggcggttgca gtgctaatag
     8041 ccacccatcc gtcagtacat gtgtagtcag cgccgtcagg gtttgctgta gacaaataca
     8101 acctagttcc gtagagctgt gagttgaatc gcaaagctga gtcagttgaa cggttcatca
     8161 actcatcaag ggacattagg ttgagatcga ctttggttaa cgtgcattcc cgaatgtaat
     8221 tgttccagga acgcctcacg tcaacatagc cgcctccatt tgctgagtta agcgcagtaa
     8281 aaactcctgt gtcataggct cgccgtctga cgtcattcaa cagtttcagt gtttcggaaa
     8341 agtggctttc cgtgacattg ggtacgatta ccccatatcc agtttcaaac aaattggtga
     8401 tggtgtatcc cacgttggat atgacacctc cagcaaagcc taccccaata gggacattgg
     8461 cgacgactcg aacctgccct gtataagcgt cctcgatagt cacagttgtg gttgggccga
     8521 agaaacaggc atatagaatc caacctacca gcacttgctg gaggttgatt tgctttgcgc
     8581 cctgaaagac ggactgaata cagatcatca agaccccaag aagcaggcca atactgacca
     8641 tcttctcgaa atccccggtg ccggtgatca ttgatactgc aatcaggatt tgctccagaa
     8701 aagcagagtc accgatagag tggattgaaa aagatcccat tccaatagct ccttagttcg
     8761 tgctaggagg attggacaaa gttgccagca tgtatttttg cttgcggatg ttgtccagta
     8821 ggttgttgta tttctcaatt tggcttgcca gatcgccgta ttgagaggac aggattgtgt
     8881 attcagcacg gatttgctgt tgcgattgcg cgagaagctc tagtgcctct ttcttgtagg
     8941 gtgatttgct gttagccatc gcaatgcgag ctgcgcggaa gaactcttcc gagaagctat
     9001 acatcatggt cagggctatc gctcctgatg actctgttgc gaacaggtta gcgccgtcct
     9061 gtgaaaggac agacaagtta cgaacaatgg tgccaatccc tccggggagg ttagaaacaa
     9121 aggccttttc tgggtcggtt aaggttccag agttcgttgc gtatttgtag atcacaccag
     9181 gtgtagagct tgttcctaac agcatatcgg tgatctggtt cttgatacct ttgagcacga
     9241 cagttttatt gctggagcca gcactcaggc agttggtcgt atcagaatca caggaataga
     9301 tctcaacaga accgcctgaa atcaggtctg acaaggtgat cttgttacct ggtagggtcg
     9361 tcagaggggt tgttttcgca ccagtgccgg ttgagttcgg gtcgtttacc agatcaccaa
     9421 tgatgactgt gccggttaaa gacatgatcg cttcaagaag ggtgttatcc ccgtactgga
     9481 accaggtgtt ggcgttgttg ctcttgagtt gcttccagac gatgttgcca atcatcttgt
     9541 tgtattcgtc aggtttgttg gctttcagtt cttccagagg actcttgccg ctggtttcct
     9601 gcttggaccc gaagaagtct tcatacaggc cggaagttgt cgcggttata gaagcatcag
     9661 ttttgtgttt aaggtccatg ccgctggtta ggtcgttcac gaaaccttga gcgagctggc
     9721 aggagttgcc cagatgttgg ttgagcgctt gcactttctt ctggaagttc tctatccact
     9781 tcgctccgtc cgggaaaacg ttatcgagcg caagctggaa ggcatagccc ttggcgttgg
     9841 ctgctacagc ccgaaggagt tggacaattt gatccgcgtt aatgaaggaa agcgaaccgc
     9901 cgaacagatc tacaccaccg caaccagctt tccatgatgg aggggcaaag ctcaccaggt
     9961 tctcgtcgaa gattcgtgtc tttgcagtga accggccacc agctaaaacg ccacgtcgtt
    10021 ggctttcata aaccccaggt ggtgttgtgt tgctcatttc attgaagagt ttgtccatct
    10081 gtgattggag gccgttagcg gctatcgccc ctgtcggtgc catgacgaga ctggccgcca
    10141 cactcagggc aagcaggctc ctttttaatg tcttgtgcgt gaccatctta gttctcctgt
    10201 aatttgtccc ggatgtactt catgagttgt tccggtggca caaagttgtc tttatcaccg
    10261 ctcgcttgag atagctgttt gaggtcagag cccagctctg gtgaggccaa gcgttcggct
    10321 atgttgtttt ccaggttgag taccggacgt gtacggttaa actcttcgtc tgtgacccaa
    10381 ccattgcgtt ttgctgcgac caaaatcctg tgattcagct caggaagaga cattggccct
    10441 tgtcctatag gagcgaactg accgtctgga gatgcgaggt aaacagcagg gaaagttacg
    10501 ataccaagtt gtttggcatg gccttcatcg gttttgtaat gggggaaaag cccactgggg
    10561 agtggtttgc cgtccataga tacaggaatg atcgagaatc cttctccttg ttccaacatc
    10621 ttgatgagcg gtgcttgcaa gtcactgtag tcatcgtcgg acttgtagaa gaagaatatc
    10681 cctacgcgtt cggctacgct tttgagtagc atgtttttgg cgttaccagc gtcacgatca
    10741 acttgttgtg aggcaaacgt ggcagcagga cgtcgagtaa tttcatccaa gaaaggatca
    10801 cctacgaccg ccagctctgt agcatcggaa aattgttcag agcgatctat cgcaaatcgt
    10861 tgcaagtaga gaaacgtcct gacgttttca acggtaggat tgttccaagc aaggtctttg
    10921 tacttgggta agttttcccg gaaccattcc gctgagaaca tttctgggcc gctcggaagc
    10981 ggagcagcag gcttaggctg tgtaggcttc gcttctgcca caggctttgg tttgggcttt
    11041 tcgggttttt tctctggttc tttgggctct tccttgtacc agaaccaacc ctcttccttt
    11101 cgctcataaa aaccaggtct tgtgccatct tgagcccaag cctggtgtga tgcccccagc
    11161 gtgagcgctg caaggagcag taaattcaaa ggtgattttt tcatagtctc acgcacgtat
    11221 tttcccatgc tcgatatggt agaggtggga ggcgtgaaat taggcaggtg taagcgccca
    11281 tttagggcgc ttagagcgtt ttatttgtca actttcacat gtgaaagaat tgaccaaact
    11341 atttggtcgt gtcctcttca acttctgtcg cttctgcggc catcttcatc tgcttctcga
    11401 ccatgcgttt ttgggtgatg tagcggataa ccatctcgac agcgctgttc aacgcaagga
    11461 ttcgcatcgc tctggtggat gcaacgtaga gcaggtttat ttcatcgtca cgggccattg
    11521 ggtcgagctc tgggtccagg acatccggaa agtcgtcata gagctgaaca aagtcccact
    11581 ccaacccttt gcaccgatga gctgttgaga ccgtaatgtc agccccaaac tcttctttga
    11641 ctgtattgcg tcgtagagtg gtgagtcgtt cagggatttc atcgtagctg ttgatgatct
    11701 tgacagccct catcatctca gggtctttgg tcgccttcgc tacttcttga tactcgaagt
    11761 agtcttcata ctcatcaagc agtttcttat tctttacccg gtctggctct gccatcgaaa
    11821 accagtacaa atcctggagc tcattgatct ggtaagcgtc gattccaccg acccagaata
    11881 cctgcgctcc ggattcggtc gcagagagcg ccgtctctat aacccccatg acggttcggt
    11941 gaagtattgc gcggtggccc acgtcacctg gtaaaaacat gagtacctga tctgctggtc
    12001 cccggccaac aacaggtcgt gtttcacctt tgagttcaag aagggcgttt gccaccagcg
    12061 aaacgttggg gccaaagcgg aagctatgag tgagatagag ttggtcggcg ttcatgagct
    12121 ctttgctatc aagggcgttg tttgcgcctc tgaacctata gatctgctgg tggcgatctc
    12181 caaccaggat taccttgcag ttctgctgta ggacgatgct acttgttacg gggttagcgt
    12241 cttgtgcttc atcaaaaaga atggtggtgt accggcgaga cagattcggc atcccgagct
    12301 gatactgttt gaggtagcaa tcgtgtacgg tcgggaacgg atcttgaacg tttgtcatcc
    12361 gtttccatat gagctcagca ccttcgacca cctggatttg gtatctctcc tgtttggacg
    12421 taagcacttt acccgtatcg gcgcgagcaa aatgcgtata aagaatccgc atgtctgcac
    12481 tacacataaa ggcgttgagc gtatcgagaa tatctttggc aaacgtccag ttcttggtat
    12541 tcaccgcttg ggcaatatcg gtgagcctta ggttgccgga gagtttgtgc tggtagcccc
    12601 ttcctatagt ggcgtaggca agctggtggg acgttttgca gtctacgttt gcaggaaact
    12661 tttctcttgc ctcgtcgcgg atagccctgt tgtatgccaa gtagaggata cgtgaatcga
    12721 ggttgttgtg ggcgtacttc accagtgtcg tggttttacc cgttccagcg taggccttaa
    12781 cgacaaggcg aggccctttg tactgagtga tcagtgattg ttctggtgtg tcaggaggaa
    12841 gttgtttcat gaggccccct acgacaaaca catctggaga gtgatgcgct tcttttgtgt
    12901 cgagaggaac gtactgatcc gcttttcttc tcgggggagg gatacttcac aatccagatc
    12961 tgtccaccag tctggggctt taccttgagc cacctccgta acccaactat ggagacggtg
    13021 taaccagcga tagtcgccaa tagatgaggt ggctagtgtc atagcctcct caatcttggt
    13081 ttgaagagcc gcagctctgt gtcgccactc ttctgaatat ttagcctttc gcgccatcag
    13141 ttttcctctt tctttttccc tcccttacca gctttagcga gctcttgctc caacccagaa
    13201 attttggtca gtgcatcatt gagtctttgt tcgaggctct tggcctgctg gtctttttcc
    13261 tgcaactgac cagccatcat gcctttgtct tgaacaagag cgcgagcttc tgcttcggcg
    13321 ctggataatt tggcgtccag cttttctacc tctccagata ggcgctggca ctctcgttca
    13381 gcggattcgc catgagcttt ggctgtggca agggagtcct gtgattgggc cagtttggcc
    13441 tgtacatttt cgagctgctc tttcaacgat gttttttgtt cctgagcggc ccggagcttt
    13501 tctgtctgct ctatactctt gcctttttgc tcctccaact caccctctgt agttgccaat
    13561 ttttggctca aagagcgatt ttcgctttta gcttgctcca ggtgatcctg tgctcgggtc
    13621 agatctgcgg ctttcgcctc cagcttgccc tccaactcaa cgatccgctt ttccagctta
    13681 tcaatgtcag ccagtgagcg ttctagctcc gcagacttga gggatagcga gttttctgcc
    13741 ttaccaaggg ccgcatcgag ctctgatttt ttgttggtga gagcttcaag ttgttcctcc
    13801 agtagctcag cccgttcggt ggcatcattt gccatgtcca cggcttgctg catatcttcc
    13861 tggtactcaa tttctttctg tcgtagcagt tcacgctcgc gctcaagctg ttcatcggcg
    13921 cttgctttgg ctaccgtata gatcttctgt aggaagagct cagcatcgct cataaccgat
    13981 tctggaagga ctacctctac cagctcttca tcgagggagt gttcctctga ccactgtttg
    14041 agatacgttg aaatggtggt aaagctcccc ttgccaatga tgtctctgat agcgatgacc
    14101 gttgggcgtt taccggcgtc cttgagcttt tgggccgcag ccgctacatc gtcaaactca
    14161 accaattttc ttgccatgag aacgttcctt ttaatttgta atgtttacga taattacgat
    14221 aattacgata atacggtaat tatcataatt atatatcatg ctgctgtcga ttggaattgt
    14281 ttgtgtggga caaagccctt ccggctgcgg aaaagccttg ttacgcggtc acgctgattc
    14341 atccagggaa ggattcgata gtgactccac cgaaggtgcc aaggatttcc gatgccgctt
    14401 tatcagatcg agttttgcgt tgttctgagg cgtcaaagtt acgaagcaat ttgagctgaa
    14461 catccttatc ctggagcacg atcaggggca ttggcgcggt aacggttttg agtacccctg
    14521 cggccatgac gtttgccacc ggttgaacct ttacttccct tcgctcccgg agataaggct
    14581 ccggggtgct ggcgatcttc tggataagct gctccagggg aagttgatag tctggcccag
    14641 atcgctccag ctcctctctg atgcgttgca aaagctcctc ttttacgggc ttcttcaagg
    14701 agtccttccg ttgccaggtg aagcggatag agtcgatgtc gccattggta tagcaccgaa
    14761 tttgtctgta aaggtggaga gtcatgacac cagggcagtc cgctcgaagt gcttcaaacc
    14821 tctcttgcct ggtggggtac gtcgagataa tgaactcctc gataccagct ttggccgcgt
    14881 tgatgcgttc aaccgtcgcc gcaatttcgt cagctacacc aatcctggaa ggggagaacc
    14941 agagtacccc cacggtgcgc ctggcagact tctgcgaata gtctgggttg atgtgaagat
    15001 ctctgtagct gtgcgctgcc agctcaagag cttcgcgccc agtttgttca gttacgacaa
    15061 tcttgttgac gggctcgttc tccattcctt ttccggtagg agggatggcc gcaacttttg
    15121 cgtaccgtgg cggtagtcgt ttgataagag aggacaggtt cgttaagtcg cggcacatgg
    15181 ccgagaattg ttctgatatg aagtttttag ccatgctgcc gcctatgtgt gggtttgttc
    15241 taacagttca ttggttacat agtagacaga tttagaccat catgcaacga gggggagggg
    15301 caagaatacg cctccgcttc gcgtcggcgg gtgccctgtt tgaccttcgt gtgtgagatt
    15361 agattgagaa agagagagaa aaagagagaa aaagagagaa agaagaaaag cgcggggcaa
    15421 gccagaaatg tggctgaggg ggactgctgg ggtggggctg gcaccctcta taccccactt
    15481 tgcatgatgg tctaactttg tggttatagg acgactttta gagtgcctag atttgctcga
    15541 ttaggacaaa tttcggtcca tccacgctga ttggcgtagc agcgcgatgg catcagaagg
    15601 ggtaactttc catgcgttgg aaagctggcg aactgcgaag actgcgagct ccattcggtc
    15661 gtcatcattg atgaaattct ggagctggtt tcctcgctca ctaaggatga tcgcaacacc
    15721 ggccttgccg ttgttgtaaa ccgcaaagct cttattcttc gcgtcgccgt gataggaacc
    15781 ctcagccttg ctacgcaaac caaagagaac gctgcaaaac gccgtcagtt cgccgcgagt
    15841 gagctgcacc gtgatcttgc ttttccagtc tgggctggac cccgatgccc tgatcggcgc
    15901 aatctcgatg ctgaccgtag gatattcacc tctggttagc gtgtgttgca cattcaggcc
    15961 ggtgcgtttc gcggggtcct tctgccagtc tgagaaaaat ttgagacttt cgccgtagga
    16021 ttgttctgtc attccaaatt acctttgctt tgaagctcct ggagctggac cacgaggtca
    16081 cgttggactt tggctatctc tgtcaccaag tcggcggtgg caatagcgtc ggtcgctgct
    16141 gaatgggctc gacctttcca gctcacacct gcctcgcagg tggcatccgc aagtgagatt
    16201 gtgccgtgcc ggttggttga gccaaaggca tcagccgcca gcttcatcgc gcacagacag
    16261 ttctgctctt gccaccaaga gagttggtct ccaaatgcac tggctgtttg cctcaacatc
    16321 ctactgtcga aactggggtt aaatatcacc agatgacggc ccgacaaaag ccgggcgaga
    16381 gctggcgcaa cttgagtcca cgtaggctca ttcgacagct cagtctcggt gatgccatga
    16441 acacccattg cctgagggtc tatttccacg gttggccgta atctggtgca gaggagaacc
    16501 gcgcctctga tgtcagtaac agccagctcg atcacctggt ctctttcacc aagtccggtc
    16561 gtctcggtat cgagaaccag aggttccaga gcgacccacc tttgtgccat gacagaggcc
    16621 tttgccaggt tgctacgcat tcttgccttg accgaaagga tggattgcgc ccttatttgc
    16681 ttttgtgatg ccggtgaaca accccttctc cgcattggtt ggcaatctgc tatccggtac
    16741 actccaaatt ggccaccata cccgtttttg tagaacgaaa ctggctctac tcctggctta
    16801 ggcttcatcc taaattcgtc cctgagccgt ccttttgaaa agcacctatc ggctttcatg
    16861 gcttcggctc tggcaagttc gagttcttca tatcattcat gctgttaatc cgctatatcg
    16921 aggcgttggc tcgctctctt caaacgctca tcgccgcgtc tgtcatattt ctgggtagtt
    16981 gcaatgcttg agtggcccat tgcgtccttc acggtcacaa tatcctcacc gttatccagc
    17041 atcgaggagg caaaggtgcg tcgcaggtca tggggcgcaa acatctccag accggcttca
    17101 actcttctgg tctccaagat gtggtagatg gcctgatccg acatccgctc tccagtcaca
    17161 tcatcaaacc gcctgatcct cgggaataaa ggcccttcat gcgttcctcg aacctcttca
    17221 acccacttat ccagtctttt ccatgcgcca ccaggcacat acgccattct ctctttgttg
    17281 cccttgccaa gaaccttgag agcgcggtcc ttgtagatca tgcttcccat gtccagcgca
    17341 acgatttccg agcggcgcaa gccacacccg aggagcaccc cgagaatggc cgcatcccga
    17401 agccctttgg cgcttgaatc actttcacat gtgaaaaaga ggctgcgaat ctcatggcgt
    17461 tcaagtgccc gccctttagg aagtcgagat ccacgtactg aacggacttg cttaatgtgc
    17521 tggaagctat ccgtatcaat ttgcttcatc gtccaggctt caagagccac ccctttgagc
    17581 gctgacaggt aggtgttgat cgttgccgga gccttccctg catcccccag catttccagc
    17641 accgccaata tgtggtgccg cctcattgag ctccatgcac agtcacgaag gttctgaaac
    17701 ccgatcatct tggcgacaat gttgaggaat gagctcatgg tctgcctgct tcgctttgac
    17761 ccgaggctca ccagataggc gacggcgggg ttgtcctgga tgttccggag cgagctcgat
    17821 gacggcaaca gttcaccgcg aatgctttgt tctgccggaa catttacttt cgcatgtgaa
    17881 actagctctt ccttgtcatt gtttgtgtcg tgcaaagtta cctcctaagc ccgaccgcaa
    17941 cgagaagaaa atcccatatt ttgaggtgaa gaggtagttc ctcctccata tgttgcgttt
    18001 cgtagctttg catcagtggt tcaaacttgg ttggattgca cagcaattcg taaactgttc
    18061 ggttgggctt ggtgatcggc ttattcggag tgaatccatg tttgttctgg aggtacagcg
    18121 ctaccgcgcc acttctggat tctccgtaat agcaatgaac gaagatctga tcgataccgc
    18181 taccaaccaa tccatccagg aaggtggaca gcttttcagc ctgggatgag tcaatgtaag
    18241 aggcgtaatt catccggaac gctgccttca tcgtgtggat ggtgttctca gaatagccgc
    18301 cgtcatagaa gctatcgcgg tacaactgcc cccactgtcc gagagcggca ggggacttgt
    18361 ctgggtcagt tatggagatc atggccgcac cgggaaccgg ctccagtctt tcggcctccg
    18421 cttgactaat gaaaaagact tttttgctaa gcatgtccca tcatcccctt acaaggatgt
    18481 gttgcgagta gctcacgcgc ctgactttgc ccctcttgag tatctacagg agcggtcgta
    18541 tacacacctc catgccgcaa gtccacaata ctggtccgac agcaagaacc tacgttctga
    18601 actttattgt ccgaatccaa accagcaaaa gtatggcacg gtccagggaa tggtttcctg
    18661 caaatagagc agcgctcaaa gttcttatcg aggattctct ttaaaacttt ctcaaatttg
    18721 tttttgttta acatcgagtt ctccacacaa agttactggc cgagcatccc agccaaggtg
    18781 gtctgctggc cttcgctaca aggtgcaaat ccggcaaaag caccggcatt aaccttgagc
    18841 tcatcaaagc gtccatcggt gtcccggtag tacaccttac gttttccaat tccaccttcg
    18901 aggtttgcgg ccaaccaggc gatcactgca tcagcatcgt tcgtaactga tgctccctga
    18961 tccagatcga taagtaccag gtgggtgtcc gtctggagtg ccacttcaaa ggtcgctctt
    19021 acatcaaaaa tcactggtcg cgctccttgt aaaaagtggg cattcagcac cacctatcct
    19081 attccaaaaa ctctac
//
LOCUS       DAPGWB010000083        18678 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.083, whole genome shotgun sequence.
ACCESSION   DAPGWB010000083 DAPGWB010000000
VERSION     DAPGWB010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18678
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.083"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            89..538
                     /gene="alaE"
                     /locus_tag="RHX79_002803"
     CDS             89..538
                     /gene="alaE"
                     /locus_tag="RHX79_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HDV2197956.1"
                     /translation="MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYS
                     RLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLV
                     VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA"
     gene            complement(575..919)
                     /locus_tag="RHX79_002804"
     CDS             complement(575..919)
                     /locus_tag="RHX79_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgaC family protein"
                     /protein_id="HDV2197957.1"
                     /translation="MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARM
                     GRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVAL
                     ERYLNGLFGEAS"
     gene            1071..1400
                     /locus_tag="RHX79_002805"
     CDS             1071..1400
                     /locus_tag="RHX79_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HDV2197958.1"
                     /translation="MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAE
                     AARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGA
                     LLSMRKS"
     gene            1648..1893
                     /gene="nrdH"
                     /locus_tag="RHX79_002806"
     CDS             1648..1893
                     /gene="nrdH"
                     /locus_tag="RHX79_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HDV2197959.1"
                     /translation="MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALR
                     AQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA"
     gene            1890..2300
                     /gene="nrdI"
                     /locus_tag="RHX79_002807"
     CDS             1890..2300
                     /gene="nrdI"
                     /locus_tag="RHX79_002807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HDV2197960.1"
                     /translation="MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYIL
                     IVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIAQKCG
                     VPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA"
     gene            2273..4417
                     /gene="nrdE"
                     /locus_tag="RHX79_002808"
     CDS             2273..4417
                     /gene="nrdE"
                     /locus_tag="RHX79_002808"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HDV2197961.1"
                     /translation="MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF
                     MATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAHAHTSGFRFHTF
                     LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPA
                     TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG
                     APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN
                     ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADIAISEHYDEL
                     VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEIL
                     QVNSASEYDENLDYARTGHDISCNLGSLNIAHTMDSPNFARTVETAVRGLTAVSDMSH
                     IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYTITWHALRT
                     SMLLARERGETFAGFKQSRYASSEYFSQYLQGNWQPKTTKVGELFARSGITLPTREMW
                     AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA
                     PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY
                     AWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL"
     gene            4427..5386
                     /gene="nrdF"
                     /locus_tag="RHX79_002809"
     CDS             4427..5386
                     /gene="nrdF"
                     /locus_tag="RHX79_002809"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HDV2197962.1"
                     /translation="MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
                     WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHA
                     RSYSSIFSTLCQTKNVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF
                     LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREEL
                     KSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLDYEPLFPAEMA
                     EVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF"
     gene            5741..6943
                     /gene="proV"
                     /locus_tag="RHX79_002810"
     CDS             5741..6943
                     /gene="proV"
                     /locus_tag="RHX79_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     ATP-binding protein ProV"
                     /protein_id="HDV2197963.1"
                     /translation="MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGV
                     KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
                     VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS
                     YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
                     VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
                     KDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALT
                     QQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRAL
                     DREGVNNG"
     gene            6936..8000
                     /gene="proW"
                     /locus_tag="RHX79_002811"
     CDS             6936..8000
                     /gene="proW"
                     /locus_tag="RHX79_002811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     permease ProW"
                     /protein_id="HDV2197964.1"
                     /translation="MADQNNPWDTTPAADSAVQSADAWGTPATAPTDGGGADWLTSTP
                     APNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLL
                     GMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI
                     VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
                     LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLAL
                     SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
                     GNRRWYTTGPVGLLTRPFIK"
     gene            8057..9049
                     /gene="proX"
                     /locus_tag="RHX79_002812"
     CDS             8057..9049
                     /gene="proX"
                     /locus_tag="RHX79_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708493.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     substrate-binding protein ProX"
                     /protein_id="HDV2197965.1"
                     /translation="MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQ
                     TLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKK
                     FYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPG
                     WGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNEL
                     KPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWTEKNPAAAKLF
                     AIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK"
     gene            9341..10525
                     /locus_tag="RHX79_002813"
     CDS             9341..10525
                     /locus_tag="RHX79_002813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2197966.1"
                     /translation="MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLS
                     ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMM
                     ILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANL
                     GGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRAL
                     LGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKS
                     HHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDAR
                     NRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEA
                     AN"
     gene            10649..11386
                     /gene="ygaZ"
                     /locus_tag="RHX79_002814"
     CDS             10649..11386
                     /gene="ygaZ"
                     /locus_tag="RHX79_002814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-valine exporter subunit YgaZ"
                     /protein_id="HDV2197967.1"
                     /translation="MESPTPQPAPGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLG
                     FSPLESVFFSCIIYAGASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRII
                     QRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
                     FSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIP
                     VAILAGIVCGCLTALIQAFWQGAPDEL"
     gene            11376..11711
                     /gene="ygaH"
                     /locus_tag="RHX79_002815"
     CDS             11376..11711
                     /gene="ygaH"
                     /locus_tag="RHX79_002815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-valine transporter subunit YgaH"
                     /protein_id="HDV2197968.1"
                     /translation="MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLD
                     TIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYG
                     LAWKVMAII"
     gene            11802..12332
                     /gene="emrR"
                     /locus_tag="RHX79_002816"
     CDS             11802..12332
                     /gene="emrR"
                     /locus_tag="RHX79_002816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter EmrAB
                     transcriptional repressor EmrR"
                     /protein_id="HDV2197969.1"
                     /translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENR
                     NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
                     RRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLS
                     RLDQMEQDGVVLEAMS"
     gene            12459..13631
                     /gene="emrA"
                     /locus_tag="RHX79_002817"
     CDS             12459..13631
                     /gene="emrA"
                     /locus_tag="RHX79_002817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrA"
                     /protein_id="HDV2197970.1"
                     /translation="MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFL
                     VLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFE
                     KAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREEL
                     QHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRI
                     VSPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITT
                     DIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYP
                     LRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG"
     gene            13648..15186
                     /gene="emrB"
                     /locus_tag="RHX79_002818"
     CDS             13648..15186
                     /gene="emrB"
                     /locus_tag="RHX79_002818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrB"
                     /protein_id="HDV2197971.1"
                     /translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL
                     GSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSL
                     NMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
                     ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQI
                     MLDRGKELDWFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLC
                     ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
                     RLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP
                     ERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQL
                     EGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG
                     GGAH"
     gene            complement(15250..15765)
                     /gene="luxS"
                     /locus_tag="RHX79_002819"
     CDS             complement(15250..15765)
                     /gene="luxS"
                     /locus_tag="RHX79_002819"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008458247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDV2197972.1"
                     /translation="MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPN
                     KEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
                     AWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
                     LPEEKLQELHI"
     gene            complement(15915..17471)
                     /gene="gshA"
                     /locus_tag="RHX79_002820"
     CDS             complement(15915..17471)
                     /gene="gshA"
                     /locus_tag="RHX79_002820"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HDV2197973.1"
                     /translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGH
                     PEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMCDERMWPL
                     SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
                     QAKCGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPF
                     EKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAK
                     IGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
                     NPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLG
                     IGCETAQFPLPQVGKDLFRDLKRVAQTLDSINGGEAYQKVCDELVACFDNPDLTFSAR
                     ILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASERRQQEMEAADTE
                     PFAVWLEKHA"
     gene            complement(17544..17972)
                     /locus_tag="RHX79_002821"
     CDS             complement(17544..17972)
                     /locus_tag="RHX79_002821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV2197974.1"
                     /translation="MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISYPWVLV
                     LTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLC
                     LLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH"
     gene            complement(17969..18535)
                     /gene="yqaB"
                     /locus_tag="RHX79_002822"
     CDS             complement(17969..18535)
                     /gene="yqaB"
                     /locus_tag="RHX79_002822"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1-phosphate/6-phosphogluconate
                     phosphatase"
                     /protein_id="HDV2197975.1"
                     /translation="MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMI
                     ALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGR
                     RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPT
                     QCVVFEDADFGIQAARAAGMDAVDVRLL"
BASE COUNT         4424 a         4844 c         4732 g         4678 t
ORIGIN      
        1 tacgctatgc gaaaatgcag atggcaatga gatccactgc tttcatctcc attaacatcc
       61 cattacgctt ttattaagga gcattagcat gttctcaccg cagtcacgct tgcgtcatgc
      121 agttgcagat acgttcgcga tggttgttta ctgttctgtc gtgaacatgt gtattgaagt
      181 tttcctctcc ggaatgagct tcgaacagtc tttttattcc agattggtag cgattccggt
      241 gaacatctta attgcatggc catacggtat gtaccgcgat ctgtttatgc gcgcggcacg
      301 caaagttagc ccgtcgggct ggataaaaaa tctggctgat atcctggctt atgtgacgtt
      361 ccagtcaccg gtgtatgtgg cgatcttgtt agtggtgggc gcagactggc atcagattat
      421 ggcggcggtc agttcaaaca tcgttgtttc gatgttgatg ggggcggttt atggctactt
      481 cctcgattat tgccgccgac tgtttaaagt cagccgttac cagcaggtaa aagcctgact
      541 cttcttttcg cgactggcat cgccagtcgc gtctttaact ggcttcgcca aataaaccat
      601 tcaaataacg ttcaagcgca acacgcgaac tgaagccatg cgggataccg taatgctcgt
      661 gtcgctcgcc tgctaaatag agcggaaatt gctggtaatg atcgcaagtt ttaatatcgg
      721 aagcgggttc agccagtgtt gaactgcgtt cttttaatgt tggatgaatt accagagcgg
      781 tacgtcccat tcgcgcttcg cgattaacat agacataatt ttccccacgg cggtaaccat
      841 acgctttctg ggttaccaca tcgacagtaa aaccgacttt ttcaagtacg cgcgccacct
      901 cgtctggtcg taaatacata tttgatcctc gttattatca accgcgggcc taccttacct
      961 gattgcgcat tcacaacgct ttcagaaaag tccataaagc cgcgatgaac ctcagttaag
     1021 aaaattatgg tctacactga aaattacatc gaattctaat gggggatcat atgtttaacc
     1081 gaccgaaccg caacgacgtt gatgatggcg tgcaggatat ccagaatgat gtcaatcaat
     1141 tagctgacag cctcgaatct gtattgaagt cctggggcag cgacgccaaa ggggaagctg
     1201 aagccgcacg cagtaaagct caggcgttgc tgaaagaaac cagggcgcga atgcatggtc
     1261 gtactcgcgt ccagcaagcc gcgcgcgatg ccgttggctg cgcggattct tttgttcgtg
     1321 aaagaccctg gtgtagcgtg ggtacagcag ctgcggtagg tatttttatc ggcgcactgt
     1381 taagcatgcg caaatcgtag tgcaaaaatg ataataaata cacgtctttg accccgaagc
     1441 ctgtcttcgg ggtttctttt tgcctggtga atcacaaaaa tccccctacc ccgtcacgct
     1501 catatccagg gtaatttcga ccactatttg ctatatattg tgtggttgaa tcttttttca
     1561 actacatcta gtatctctgt atcaacagag agacaacccg acgcgtatca tcgcgccgta
     1621 tcttcatttt aaacggaaat acgaatcatg cgcattacta tttacactcg taacgattgc
     1681 gttcagtgcc acgccaccaa acgggcgatg gaaaaccggg gctttgattt tgaaatgatt
     1741 aatgtcgatc gcgttcctga agcagcggaa gcgttgcgtg ctcagggctt tcgtcagttg
     1801 ccggtagtga ttgctggcga tcttagctgg tctggtttcc gtccggacat gattaaccgt
     1861 ctgcatccag cgccacacgc ggccagtgca tgagccagct cgtctacttc tccagcagct
     1921 ccgaaaatac gcagcgtttt atcgaacgtt taggtctgcc cgcggtgcgc atcccgctca
     1981 atgagcggga acggattcag gtagacgagc cttacatcct gatcgtgccc tcttacggcg
     2041 gcggcggtac ggctggcgcg gtgccacgac aggtaattcg ctttttaaac gacgagcaca
     2101 accgggcgtt gcttcgcggc gttattgctt cgggtaatcg caactttggt gaggcgtatg
     2161 gccgtgccgg agatgtgatt gctcagaaat gcggcgtgcc gtggctgtac cgttttgaac
     2221 tcatgggtac gcaaagcgat atcgaaaacg ttcgtaaagg agtaaccgaa ttttggcaac
     2281 gacaaccgca gaatgcctga cgcaggaaac gatggattac cacgcgctga atgcgatgct
     2341 taacctctac gatagcgcag gtcgcattca gttcgataaa gaccgccagg ccgttgacgc
     2401 ctttatggcg acgcatgtgc gtccgaacag tgtgaccttc agtagccagc agcagcgcct
     2461 gaactggctg gtcaacgaag gttactatga tgaaagcgtt cttaatcgct actctcgcga
     2521 ctttgtcatt acgctgtttg cccacgcaca caccagcggt tttcgtttcc atacattcct
     2581 cggggcatgg aagttttaca ccagctatac gttgaagaca ttcgacggta agcgttatct
     2641 ggaagatttt gccgatcgag tcacgatggt ggcgctaacg ctggcacaag gcgatgaaac
     2701 actggcgttg caactgaccg atgagatgct gtcaggacgc tttcagcctg caacaccgac
     2761 attcctcaac tgtggtaagc agcagcgcgg cgaactggtt tcctgttttt tgctgcgtat
     2821 tgaagacaat atggagtcga ttggccgggc ggtaaattcc gcactgcaac tgtcgaaacg
     2881 cggcggcggc gtagcatttt tgctgtcgaa tctgcgggaa gcgggcgcgc caattaaacg
     2941 tattgaaaat caatcttctg gcgtaattcc ggtgatgaaa atgctggaag acgcattttc
     3001 ctatgccaac caactcggcg ctcgtcaggg ggctggtgca gtctatttac atgctcatca
     3061 tcccgatatt ctgcgttttc tcgacacgaa acgggaaaat gccgacgaaa aaatccgcat
     3121 taaaacactg tcgcttggcg tggtgatccc ggatatcact ttccatctgg ccaaagagaa
     3181 tgcgcagatg gcgctgtttt cgccctatga cgttgagcga gtttatggca agccgtttgc
     3241 cgatatcgcc attagcgaac actatgacga actggttgcc gatgaacgca tccgcaaaaa
     3301 atacctcaac gcccgtgatt tcttccagcg actggcagaa atccagtttg agtccggcta
     3361 tccctacatc atgtatgaag acacggtaaa ccgtgctaac cctatcgccg ggcgcataaa
     3421 tatgagtaat ctatgctcag aaattttgca ggttaacagc gcctcagagt atgacgagaa
     3481 tctcgactat gcccgtacag gccatgatat ttcctgcaat ttaggttcgt tgaatattgc
     3541 ccacaccatg gattccccca actttgcccg cacggtagag actgccgtac gcggtttaac
     3601 ggcggtgtca gatatgagtc atatccgcag cgtgccgtcc atcgaagccg gaaatgccgc
     3661 ctcacacgcc atcgggctgg ggcagatgaa tttacacggt tatctggcgc gagaaggcat
     3721 cgcttatggt tcgccggaag cactggattt caccaatctc tatttctata ccatcacctg
     3781 gcacgcactg cgtacctcga tgttgctggc acgcgaacgc ggtgaaacct tcgccgggtt
     3841 caaacagtca cgctatgcca gtagtgaata tttcagccaa tatctgcaag ggaactggca
     3901 gccgaaaacg acgaaagttg gcgaactgtt tgcccgtagc ggtattacgt tacctacccg
     3961 tgagatgtgg gcgcaactgc gcgacgacgt gatgcgctac ggcatttata accagaatct
     4021 tcaggcggtg ccgccaaccg gttctatctc ttatatcaac catgctacgt cgagtattca
     4081 tccgattgtg gcgaaagtag agatacgcaa agagggcaaa acaggacgcg tttactaccc
     4141 tgccccgttt atgactaacg agaatctggc gctgtatcag gatgcttacg aaatcggcgc
     4201 agaaaagatc atcgacacct acgcggaagc gactcgccat gtcgatcagg gtttgtcgct
     4261 gacgctgttt ttccccgata ccgccaccac tcgcgatatc aacaaagcgc agatttacgc
     4321 ctggcgcaaa ggtatcaaaa cgctctatta cattcgcctg cgtcagatgg cgctggaagg
     4381 cactgaaatt gaaggctgcg tctcctgtgc actttaagga atatctatga aactctcacg
     4441 tatcagcgcc atcaactgga acaagatatc tgacgataaa gatctggagg tgtggaatcg
     4501 cctgaccagc aatttctggc taccagaaaa ggtgccgctg tcgaacgata ttcctgcctg
     4561 gcagacatta actgtcgtag aacaacaact gacgatgcgc gtttttactg gcctgacgct
     4621 gctcgacacg ctgcaaaatg ttatcggcgc gccttcgctg atgcccgatg cactcacgcc
     4681 tcatgaagaa gcggtattat cgaatatcag ctttatggaa gcggttcatg cccgctctta
     4741 cagttcgatt ttctcgacgc tgtgtcagac caaaaatgtc gatgccgcct acgcatggag
     4801 tgaagaaaac gcaccgttgc agcgaaaagc tcagattatt cagcaacatt atcgcggtga
     4861 tgatccgctg aaaaagaaaa tcgccagtgt gtttcttgaa tcttttttgt tctattccgg
     4921 tttctggctg ccgatgtatt tttccagccg cggaaagctg accaatacag cagatctgat
     4981 ccgtctgatt atccgcgatg aagcagtcca cggttactac ataggctata aatatcagaa
     5041 aaacatggaa aagatatctc tgggacaacg tgaagagttg aagagtttcg ccttcgattt
     5101 gttgctggaa ctctacgaca acgagttgca atacaccgat gagctgtacg ccgaaacccc
     5161 gtgggctgac gatgtgaaag cgtttctctg ttacaacgcc aataaggctt tgatgaatct
     5221 ggactacgaa ccgttatttc ccgcagaaat ggcggaagtg aatccggcaa tcctcgccgc
     5281 gctttcgccg aatgccgatg aaaatcacga tttcttttcc ggttcaggct cctcttatgt
     5341 gatggggaaa gcggttgaaa cagaagatga agactggaat ttctgagggt gttattttca
     5401 aaaatatcac tacccgcagc agggaaataa ttcccgccaa atagcttttt atcacgcaaa
     5461 tattctgtag tgatctacac tgatactctg ttgcattatt cgcctgaaac tacaatattc
     5521 aggcgttttt tcgctatcta tgacaaaaaa tatcaacttt tctcgatttg ctctcagccc
     5581 ttatatcacg ggaaattccg gcgatttgct cgcatcaata ttcatgccac atttgccctc
     5641 aggggttgcc tcagattctc agtatgttag ggtagaaaaa agtgactatt tccattgggt
     5701 aatatatcga cataaacaaa taaaggaatc tttctattgc atggcaatta aattagaaat
     5761 taaaaatctt tataaaatat ttggcgagca tccacagcga gcgttcaaat atatcgaaca
     5821 aggactttcg aaagaacaaa ttctggaaaa aactgggcta tcgcttggcg taaaagacgc
     5881 cagtctggcc attgaagaag gcgagatatt tgtcatcatg ggattatccg gctcgggtaa
     5941 atccacaatg gtacgccttc tcaatcgcct gattgaaccc acccgcgggc aagtgctgat
     6001 tgatggtgtg gatattgcca aaatatccga tgccgaactc cgtgaggtgc gcagaaaaaa
     6061 gattgcgatg gtcttccagt cctttgcctt aatgccgcat atgaccgtgc tggacaatac
     6121 tgcgttcggt atggaattgg ccggaattaa tgccgaagaa cgccgggaaa aagcccttga
     6181 tgcactgcgt caggtcgggc tggaaaatta tgcccacagc tacccggatg aactctctgg
     6241 cgggatgcgt caacgtgtgg gattagcccg cgcgttagcg attaatccgg atatattatt
     6301 aatggacgaa gccttctcgg cgctcgatcc attaattcgc accgagatgc aggatgagct
     6361 ggtaaaatta caggcgaaac atcagcgcac cattgtcttt atttcccacg atctcgatga
     6421 ggctatgcgt attggcgacc gaattgccat tatgcaaaat ggtgaagtgg tacaggtcgg
     6481 cacaccggat gaaattctca ataatccggc gaatgattat gtccgtacct tcttccgtgg
     6541 cgttgatatt agtcaggtat tcagtgcgaa agatattgcc cgccggacac cgaatggctt
     6601 aattcgtaaa acccctggct tcggcccacg ttcggcactg aaattattgc aggatgaaga
     6661 tcgcgaatat ggctacgtta tcgaacgcgg taataagttt gtcggcgcag tttccatcga
     6721 ttcgcttaaa accgcgttaa cgcagcagca aggtcttgat gcggcgctga ttgatgcgcc
     6781 gttagcagtc gatgcacaaa cgcctcttag cgagttgctc tctcatgtcg gacaggcacc
     6841 ctgtgcggtg cccgtggtcg acgaggacca acagtatgtc ggcatcattt cgaaaggaat
     6901 gctgctgcgc gctttagatc gtgagggggt aaataatggc tgatcaaaat aatccgtggg
     6961 ataccacgcc agcggcggac agtgccgtgc aatccgcaga cgcctggggt acaccggcga
     7021 ctgcaccgac tgacggcggt ggtgctgact ggctgaccag tacgcctgcg ccaaacgtcg
     7081 agcattttaa tattctcgat ccgttccata aaacgctgat cccgctcgac agttgggtca
     7141 ctgaagggat cgactgggtt gttacccatt tccgtcccgt cttccagggc gtgcgcgttc
     7201 cggttgatta cattctcaac ggtttccagc aattgctgct gggtatgccc gcaccggtgg
     7261 cgattatcgt tttcgctctc atcgcctggc agatttccgg ggtcggaatg ggcgtggcga
     7321 cgctggtttc gctgattgcc atcggcgcaa tcggtgcctg gtcgcaggcc atggttaccc
     7381 tggcgctggt gttaaccgcc ctgctgttct gtatcgtcat tggtttgccg ctggggatct
     7441 ggctggcgag aagtccgcga gcggcgaaaa ttattcgtcc actgcttgat gccatgcaga
     7501 ccacgccagc gtttgtttat ctggtgccaa tcgtcatgct atttggtatc ggtaacgtgc
     7561 cgggcgtggt ggtgacgatc atctttgctc tgccgccgat tatccgtctg accattctgg
     7621 ggattaacca ggttccggcg gatctgattg aagcctcgcg ctcattcggt gccagcccgc
     7681 gccagatgct gttcaaagtt cagttaccgc tggcgatgcc gaccattatg gcgggcgtta
     7741 accagacgct gatgctggcc ctttctatgg tggtcattgc ctcgatgatt gccgtcggcg
     7801 ggctgggtca gatggtactt cgcggtatcg gtcgtctgga tatggggctt gccaccgttg
     7861 gcggcgtcgg gattgtgatc ctcgccatta tcctcgaccg cctgacgcag gccgttgggc
     7921 gcgactcacg cagtcgcggc aaccgtcgct ggtacaccac tggccctgtc ggtctgctga
     7981 cccgcccatt cattaagtaa ctctgcactt gcccggtaac gccgggcata tcaccctgcc
     8041 aaaaaaagga ataacaatgc gacatagcgt actttttgcg acagcgtttg ccacgcttat
     8101 ctctacacaa acttttgctg ccgacctgcc gggcaaaggc attacagtta atccagttca
     8161 aagcaccatc accgaagaaa ccttccagac actgctggtc agtcgtgcgc tggagaaatt
     8221 aggttatacc gtcaataaac ccagcgaagt agattacaac gttggctaca cctcgcttgc
     8281 ttccggcgat gcaaccttca ccgccgtgaa ctggacgccg ctgcatgaca acatgtacga
     8341 agctgccggt ggcgataaga aattttatcg tgaaggggta tttgttaacg gcgcggcaca
     8401 gggttacctg atcgataaga aaaccgccga ccagtataaa atcaccaaca tcgcacaact
     8461 gaaagatccg aagatcgcca aactgttcga taccaacggc gacggtaaag cggatttaac
     8521 cggttgtaac cctggctggg gctgcgaagg tgccatcaac caccagcttg ccgcgtatga
     8581 actgaccaac accgtgacgc ataatcaggg gaactacgca gcgatgatgg ccgacaccat
     8641 cagtcgctac aaagagggca aaccggtgtt ttattacacc tggacgccgt actgggtgag
     8701 taatgagctg aagccaggga aagatgtggt ctggttgcag gtgccgttct ccgcactgcc
     8761 gggcgataaa aatgccgata ccaaactgcc gaatggcgcg aattacggct tcccggtcag
     8821 caccatgcat atcgttgcca acaaagcctg gaccgagaaa aatccggcgg cagccaaact
     8881 gtttgccatt atgcagttgc cagtggccga tattaacgcc cagaacgcca ttatgcatga
     8941 cggcaaagcc tcagaaggcg atattcaggg ccacgttgat ggctggatca aagcccacca
     9001 gcagcagttc gatggctggg tgaatgaggc gctggcagcg cagaagtaat ttttattcag
     9061 gcggataagg cgtttttgcc tcatccgccg ctctgtacac aatgcctgat gcgacgctga
     9121 cgcgtcttat catgcctaca aaatacactc attccgtatg gcggataagg cgttttcgcc
     9181 gcatccgccg ttctgtgcac aatgcctgat gcgacgctgg cgcgtcttat catgcctaca
     9241 aaccacatcg cacatttcaa caagctatct ttcatcccat attcatcaac atccgctatt
     9301 attgatttcc agcttaatca tcacctgatg aacaaaaata atgactaaac ctaatcatga
     9361 gcttagcccg gcgctgatcg tgctgatgtc tatcgccacc ggtctggcgg tcgccagtaa
     9421 ctattacgct cagccattgc tcgacaccat cgcgcgtaac ttttcccttt ccgccagttc
     9481 ggcaggcttt attgttaccg ccgcgcaatt gggctatgca gcaggtctgc tgtttcttgt
     9541 tcccctcggt gatatgtttg aacgccgccg cctgattgtc tcgatgacct tactggcggc
     9601 aggtggcatg ttaatcactg ccagcagtca gtcgctggcg atgatgatcc tcggtacggc
     9661 attaaccggt ttattctctg tcgtggcaca aattctggtt ccgctggcag cgacgctggc
     9721 ttcaccggac aaacgcggca aagtggttgg cactattatg agcggtctgc tgttggggat
     9781 cttgctggca cggacagttg ccggattgct ggcgaatctc ggcggctggc gcaccgtctt
     9841 ttgggttgcc tcggtgttaa tggcactgat ggcgctggca ttatggcgtg gtctgccaca
     9901 aatgaaatca gaaacccacc tcaactaccc acagttgtta ggttccgttt tcagcatgtt
     9961 tatcagcgat aagatcctgc gcacccgcgc attgctgggc tgcctgacct ttgccaactt
    10021 cagcattctc tggacctcaa tggccttttt gcttgccgct ccacctttta actacagcga
    10081 tggtgtcatt ggtctgtttg gacttgcggg agctgccgga gcgttgggcg ctcgtccggc
    10141 gggcggtttt gccgataagg gtaaatcgca ccacaccaca actttcggtc tgctgctgct
    10201 attactttca tggctggcga tctggtttgg tcacacttcc gtactggcgc tgattatcgg
    10261 catcctggtg ctggatctca ccgtacaggg cgtgcatatc actaaccaga cggtaattta
    10321 tcgaatacac cctgatgcgc gtaatcgcct gaccgcaggt tacatgacca gctactttat
    10381 tggcggtgcc gccggttcgc taatttcagc ctcagcctgg caacatggcg gttgggctgg
    10441 cgtttgtctg gctggcgcga cgattgccct ggttaactta ctggtctggt ggcgaggttt
    10501 tcatcgtcag gaagccgcaa attaagcaat cagcaaccgt tttcgtggct ttacacttat
    10561 aagggtgtta agaagcccat cagtctgata aggttaagat attcattcag tctatttata
    10621 atattaacaa tcgttaagcg tacactctat ggaaagccct actccacagc ctgctcctgg
    10681 ttcggcgacc ttcatggaag gatgcaaaga cagtttaccg attgttatta gttatattcc
    10741 ggtggccttt gcgttcggtc tgaatgcgac ccgtctggga ttctctcctc tcgaaagcgt
    10801 ttttttctcc tgcatcattt atgcaggcgc gagccagttc gtcattaccg cgatgctggc
    10861 agccgggagt agtttgtggg ttgctgcact gaccgtcatg gcaatggatg ttcgccatgt
    10921 gttgtatggc ccgtcactgc gtagccgtat tattcagcgt ctgcaaaaat cgaaaaccgc
    10981 cctgtgggca tttggcctga cggatgaggt ttttgccgcc gcaaccgcaa aactggtacg
    11041 caataatcgc cgctggagcg agaactggat gatcggcatt gccttcagtt catggtcatc
    11101 gtgggtattt ggtacggtaa taggggcatt ctccggcagc ggcttgctgc aaggttatcc
    11161 cgccgttgaa gctgcattag gttttatgct tccggcactc tttatgagtt tcctgctcgc
    11221 ctctttccag cgcaaacaat ctctttgcgt taccgcagcg ttagttggtg cccttgcagg
    11281 cgtaacgcta ttttctattc ccgtcgccat tctggcaggc attgtctgtg gctgcctcac
    11341 tgcgttaatc caggcattct ggcaaggagc gcccgatgag ctatgaggtt ctgctgcttg
    11401 ggttactggt tggcgtggcg aattattgct tccgctattt gccgctgcgc ctgcgtgtgg
    11461 gtaatgcccg cccaaccaaa cgtggcgcgg taggtatttt gctcgacacc attggcatcg
    11521 cctcgatatg cgctctgctg gttgtctcta ccgcaccaga agtgatgcac gatacacgcc
    11581 gtttcgtgcc cacgctggtc ggcttcgcgg tactgggtgc cagtttctat aaaacacgca
    11641 gcattatcat cccaacactg cttagtgcgc tggcctatgg gctcgcctgg aaagtgatgg
    11701 cgattatata acccacaaga atcatttttc taaaacaata catttacttt atttgtcact
    11761 gtcgttacta tatcggctga aattaatgag gtcataccca aatggatagt tcgtttacgc
    11821 ccattgaaca aatgctaaaa tttcgcgcca gccgccacga agattttcct tatcaggaga
    11881 tccttctgac tcgtctttgc atgcacatgc aaagcaagct gctggagaac cgcaataaaa
    11941 tgctgaaggc tcaggggatt aacgagacgt tgtttatggc gttgattacg ctggagtctc
    12001 aggaaaacca cagtattcag ccttctgaat taagttgtgc tcttggatca tcccgtacca
    12061 acgcgacgcg tattgccgat gaactggaaa aacgcggttg gatcgaacgt cgtgaaagcg
    12121 ataacgatcg ccgctgcctg catctgcaat taacggaaaa aggtcacgag tttttgcgcg
    12181 aggttttacc accgcagcat aactgcctgc atcaactctg gtccgcgctc agcacaacag
    12241 aaaaagatca gctcgagcaa atcacccgca aattgctctc ccgtctcgac cagatggaac
    12301 aagacggtgt ggttctcgaa gcgatgagct aacgcgtcat ctcgctcaaa aatccagatt
    12361 tataaaagaa aaaatgaccg gccagcatcg caacatgctg gcctttttgg caagcaggtc
    12421 ggctcagccg atgagttaag aagatcgtgg agaacaatat gagcgcaaat gcggagactc
    12481 aaaccccgca gcaaccggta aagaagagcg gcaaacgtaa gcgtctgctc ctccttctca
    12541 ccttgctctt tataattatt gccgtagcga tagggattta ttggtttttg gtactgcgtc
    12601 atttcgaaga aaccgatgac gcatacgtgg cagggaatca gattcaaatt atgtctcagg
    12661 tgtctggcag cgtgacgaaa gtctgggccg ataacaccga ttttgtaaaa gaaggcgatg
    12721 ttctggtcac tctcgacccg acagatgctc gccaggcgtt tgaaaaagcc aaaactgcac
    12781 tggcttccag cgttcgccaa acccaccagc tgatgattaa cagcaaacag ttgcaggcga
    12841 atattgaggt gcaaaaaatc gccctcgcga aagcacaaag cgactacaac cgccgtgtgc
    12901 cgctgggcaa tgccaacctg attggtcgcg aagagctgca acacgcccgc gacgccgtca
    12961 ccagtgccca ggcgcaactg gacgtcgcta ttcaacaata caatgccaat caggcgatga
    13021 ttctggggac taaactggaa gatcagcctg ccgtgcaaca ggctgccacc gaagtacgta
    13081 acgcctggct ggcgctggag cgtacccgta ttgtcagtcc gatgaccggt tatgtctccc
    13141 gccgcgcggt acagcctggg gcgcaaatta gcccaacgac gccgctgatg gcggtcgttc
    13201 cagccaccaa tatgtgggtg gatgccaact ttaaagagac gcagattgcc aatatgcgta
    13261 tcggtcagcc ggtcactatc accacggata tttacggcga tgatgtgaaa tacaccggta
    13321 aagtggttgg tctggatatg ggcacaggta gcgcattctc actgcttccg gcgcaaaatg
    13381 cgaccggtaa ctggatcaaa gtcgttcagc gtctacctgt gcgtatcgaa ctggaccaga
    13441 aacagctgga gcaatacccg ctgcgcattg gtttgtccac gctggtgagc gtcaatacca
    13501 ctaaccgtga cggtcaggta ctggcaaata aagtacgttc aacaccggtc gcggtaagta
    13561 ccgcgcgtga aatcagcctg gcacctgtca ataaactgat cgacgatatc gtaaaagcta
    13621 acgctggcta atccagaggt gcgtgtgatg caacagcaaa aaccgctgga aggcgcgcaa
    13681 ctggtcatta tgacgattgc gctgtcactg gcgacattca tgcaggtgct ggactccacc
    13741 attgctaacg tggcgatccc cactatcgcc gggaatctgg gctcatcgct cagccaggga
    13801 acgtgggtaa tcacttcttt cggggtggcg aatgccatct cgatcccgct taccggctgg
    13861 ctggcaaagc gcgtcgggga agtgaaactg ttcctttggt ccaccatcgc ctttgctatt
    13921 gcgtcgtggg cgtgtggtgt ctccagcagc ctgaatatgc tgatcttctt ccgcgtgatt
    13981 caggggattg tcgccgggcc gttgatcccg ctttcgcaaa gtctattgct gaataactac
    14041 ccgccagcca aacgctcgat cgcgctggcg ttgtggtcga tgacggtgat tgtcgcgcca
    14101 atttgcggcc cgatcctcgg cggttatatc agcgataatt accactgggg ctggatattc
    14161 ttcatcaacg tgccgattgg cgtggcggtg gtgttgatga cactgcaaac tctgcgcgga
    14221 cgtgaaaccc gcaccgaacg gcggcggatt gatgccgtgg ggctggcact gctggttatt
    14281 ggtatcggca gcctgcagat tatgctcgac cgcggtaaag agctggactg gttctcatca
    14341 caggaaatta tcattcttac cgtggtggca gtggtggcta tctgcttcct aattgtctgg
    14401 gagctgaccg acgataaccc gatagtcgat ctgtcgttgt ttaagtcgcg caacttcacc
    14461 atcggctgct tgtgtatcag cctcgcgtat atgctctact tcggcgcgat tgttctgctg
    14521 ccgcagttgt tgcaggaggt ctacggttac acggcaacgt gggcaggtct ggcctctgcg
    14581 ccggtaggga ttattccggt gatcctgtcg ccgattatcg gccgcttcgc gcataaactg
    14641 gatatgcggc ggctggtaac cttcagcttt attatgtatg ccgtctgctt ctactggcgt
    14701 gcctatacct ttgaaccagg tatggatttt ggcgcgtcgg cctggccgca gtttatccag
    14761 gggtttgcgg tggcctgctt ctttatgccg ctgaccacca ttacgctgtc tggtttgcca
    14821 ccggaacgac tggcggcggc atcgagcctc tccaacttta cgcgtacgct ggcggggtct
    14881 atcggcacgt ccatcaccac caccatgtgg accaaccgcg agtcgatgca ccacgcacag
    14941 ttaaccgagt cggtaaaccc gtttaaccca aacgcccagg cgatgtacag tcaactggaa
    15001 gggcttggga tgacgcaaca gcaggcctcc ggctggattg cccagcagat caccaaccag
    15061 gggctgatta tttccgccaa tgagatcttc tggatgtcag ccgggatatt cctcgtcctg
    15121 ctggggctgg tgtggtttgc taaaccgcca tttggcgcag gtggcggcgg aggcggtgcg
    15181 cactaagtac aactaagcca gttcatttga actggctttt ttcaattaat tgtgaagata
    15241 gtttactgac taaatgtgca gttcctgcaa cttctcttcc ggcagcgcca gttcttcgtt
    15301 gctgttgatg cgtacgtcac gttccagaat gctacgcgca atatcctgcg cttcctgcaa
    15361 cgagtgcatc tggtaagtgc cacactggta gacgttcagt tccgggatct gattctgatc
    15421 ctgcactttc agcacgtctt ccattgccgc tttccaggca tcagcaacac gctgctcatc
    15481 tggcgtacca atcagactca tataaaaacc ggtgcggcag cccattggcg agatatcgat
    15541 aatctctaca ccattaccgt taagatggtt acgcataaaa ccagcaaaca ggtgctccag
    15601 ggtatggatc cctctttctg gcatcacttc tttgttcggc acgcagaagc gcagatcgaa
    15661 cacggtgatt gcgtcgccat gcggggtgtt cattgttttc gccacccgaa ctgcaggcgc
    15721 ttccatccgg gtatgatcga ctgtgaagct atctaacaac ggcatttagc cacctccggt
    15781 aattttttta aaaattttct gaactctttc ttcccaggcg agtctgagta tatgaaagac
    15841 gcgcatttgt tatcatcatc cctgaattca gagatgaaat tttggccact cacgagtggc
    15901 ctttttcttt tctgtcaggc gtgtttttcc agccacaccg caaacggttc ggtatcagcg
    15961 gcttccattt cctgctgacg gcgttcagac gcctcgcgct cggctacaaa atcctcttcg
    16021 cgcagaattt ccagcggctc ttcacgcagc agattacggt aggcttctgc aaatgctttg
    16081 cctgttccgc caataccagt atcaatcata gaccttaaga tacgggcaga gaaagtcaga
    16141 tcgggattat cgaagcaggc aaccagttca tcacacactt tctgatacgc ttcgccgccg
    16201 ttaatactat ccagcgtttg cgcgacgcgt ttcagatcgc ggaacagatc tttacccacc
    16261 tgcggtaacg ggaactgtgc ggtttcgcag ccgataccca gcgtcagacc cggtttgcga
    16321 ccttcgagga tcacccggtt ccagttaacg cgtgtacagg caagttcgct actgctcatt
    16381 tccggtgcat cagccagcgc acaccagacc ataaacaggt cgaggaatcg cacctgctgt
    16441 tcatctacac caatcggcga gaacgggttg atgtccagcg aacgcacttc aatatattca
    16501 atgccgccac gtaacagcgc atcagaaggt gactcgccgc tgcgggtaac gcgttttgga
    16561 cgaatcggcg catacagttc gttttcaatc tgcagcacgt tgctattgat ttgcagcctc
    16621 ttaccgtctt tctcaatacc aatcttcgcg tactcttccg atggcgtttt gattgcctgt
    16681 ttaaggcccg ctacgtactc gtaaagatcg ttgaaggtaa taccaagatt gctttgcgat
    16741 ttattggtat agccgagatc gctcaaacga agagaggtcg catacggcag gtaatacata
    16801 ccgcactcgg ttttctcaaa cggcagcgat gttggttttc cttgcaggaa agaagaacaa
    16861 atcgccggag atgcaccaaa cagataagga atgacccaac cgaaacgata gtaattgcgg
    16921 ataacgcgga aatagcccgc agaaattttc tctttggcat cagcgcccga gatatcaccg
    16981 cacttcgctt gccagaatgc cattggtaaa gagaaattgt agtgcacgcc ggaaatggtt
    17041 tgcatcagcg cgccgtagcg atttttcagc ccttcacggt acagcgtttt aaagcgtccg
    17101 gtgttagaag tgccgtactg tgccagttcg atgtcctgac cttctgcgat gtagcatggc
    17161 atacttaacg gccacatccg ctcatcgcac atattgcgcg ccgtataacg atgcagatcg
    17221 cgcataaagg tcagcatatg ttcaatatca ccatccactg gtgtaatgaa ttccagcaat
    17281 gcttccgcaa aatcggtagt aatccattta tgcgtcagtg cggaacctaa tgcttcagga
    17341 tgacctgttg ttgccagtgt gccatcagca ttaacacgca aagtttcgcg ctccagccca
    17401 cgctgtatcc cctttaacgc ctgaggatgt ttttccagcc aggccagcgc ctgtgatacg
    17461 tccgggatca aattgacctc ccgcctgtca aaatcgtttt aattagcata actgtaatgg
    17521 tgaccatatg tgcaggccta caattagtgc caccacatca tgccctgaac ggtcgctgct
    17581 gcaactgcaa catagcgtaa cgctttacca aggcacaaaa aaaagattac tggcccccag
    17641 gagatgcgca tccatcccgc taacagacac agtaaatcgc caaccacggg catccagctt
    17701 aataatagcg tgactgcacc atagcgtttc agccagccgg tagctttctc ttgccagcgc
    17761 gatgttttac gcaatggaaa gaaacgccca aggataacgt tagttaaccc tccaaggcta
    17821 ttacccattg ttgctgttaa aactaaaacc cagggataac tgatcccgga aagcaacatt
    17881 gccaccagca cgacttcgga gttgccgggt aatagtgtag cgctgagaaa actactggca
    17941 aacaacgaga aaagcgataa cgcttcactc acagcaagcg aacatccacg gcgtccatgc
    18001 ctgctgcacg ggccgcctga ataccgaaat cggcatcttc aaagaccaca cactgcgtcg
    18061 gttgcacgcc catacgctgc gcgcacaaca aaaatgtgtc tggcgcgggt ttatggtgtt
    18121 tgacgtgatc agcagcgacg acggcgtcaa aataacggcg taatcccagg tgcgccagca
    18181 atgcctcagc gatggcgctt tcactccccg ttcctacagc cattgggcga cgaccatgcc
    18241 aacttttcac cacttcaaca agaggaagcg gctcgacact atccagcagc atacttctta
    18301 ctgcttctgt tttttcacgc gctaacgcat gcgggtcgag atcggcctga ttcagctcaa
    18361 taattgcctg agcaatacgc caggtgggcg atccattaag cgcaatcatt gcctgaacat
    18421 cgtactgaag accgtagtgc cctaatactt cgcgccacgc tttacggtgc gtaggctccg
    18481 tatccaggat tgtgccatcc atatcaaaaa ttaaacctgc ataacgctcg tacatagtct
    18541 tctcgcaagt cgaaaaatat gacgctactt tagcgtaatt gcttgatttt gtcgctgatg
    18601 gcgaaggaga agaaaattca ggaaatggat aaagtagtta tttagaaatg agatattttt
    18661 gaaggaaatt tttgggag
//
LOCUS       DAPGWB010000084        18569 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.084, whole genome shotgun sequence.
ACCESSION   DAPGWB010000084 DAPGWB010000000
VERSION     DAPGWB010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18569
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.084"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            29..568
                     /locus_tag="RHX79_002823"
     CDS             29..568
                     /locus_tag="RHX79_002823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000421825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1441 family protein"
                     /protein_id="HDV2197976.1"
                     /translation="MELLMSNVSGIGDAYYWSVFKIAEAFGLHRDTVKKRLLAANTPV
                     AATVRGNPVYALQHVGPALFSVKHEAADSVHDPSRMEPKERKDWYQSENERIKLEKEQ
                     RKLIPVDEVVIVYSSMRKAVVQVLETIPDVLERDCALTPQAVGVVQQAIDDLRYTLQE
                     KSYEACAAELIPDEEGESL"
     gene            577..2676
                     /locus_tag="RHX79_002824"
     CDS             577..2676
                     /locus_tag="RHX79_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HDV2197977.1"
                     /translation="MGFSSARNLGRDISAGFSPPRRMPISEAVKKFMRVPKGAGNSVP
                     WDPELTPYIIEPMNCLASREYDAVIFVGPARTGKTIGLIDGWIVYTIVCDPSDMLVVQ
                     MTEDKAREHSKKRLDRTFRSSAAVKKRMSPRRNDNNVHDKTFRDGSFLKIGWPSVNIM
                     SSSDYRFVALTDYDRFPENIDSEGDGFSLASKRTTTFMSAGMTLVESSPGRDICDSKW
                     RRKSPHEAPPTTGILSLYNRGDRRRWYWSCPHCGEYFQPAMDAMTGYRNEPDPFKASE
                     AAYLLCPHCSGIITAEKKRELNSAGVWLREGQVIDRNGNVSGEPRRSRIASFWMEGPA
                     AAYQTWAQLVYKLLTAEQEYEATGSEETLRAVINTDWGLPYLPRASMEQRKSELLEQR
                     AEPVPSRSVPDGINFLVATVDVQAGRHRRFVVQVTGYGSRGERWIIDRYNITQSLRSD
                     CDGESQRIDPASYPEDWDVLLTDVFHKSWPLASDPSQQMRLMAMAVDSGGEDGVTDNA
                     YKFWRRCRRDGLGKRIYLFKGDSIRRAKLISRTFPDNTGRTGRRAQAAGDVPLWLLQT
                     DALKDRVNNALWRDSPGPGYVHFPDWLGSWFYDELTYEERSRDGKWSKPGRGANEAFD
                     LMVYAEALVILHGYEKIRWPDAPEWASRETWLECVQDSTEPSSSPEPVSTPVKKQKRK
                     KTVTDDVNPWLTSGGWL"
     gene            2673..2885
                     /locus_tag="RHX79_002825"
     CDS             2673..2885
                     /locus_tag="RHX79_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001072975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2197978.1"
                     /translation="MNQNDIEAMIQRYTEAEMAVLDGKSVTFNGQQMTMENLSEIRQG
                     RQEWERRLAALITRRRGHPGYRLARF"
     gene            2885..4393
                     /locus_tag="RHX79_002826"
     CDS             2885..4393
                     /locus_tag="RHX79_002826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDV2197979.1"
                     /translation="MAILDDVIGVFSPGWKAARLRSRAVIQAYEAVKTTRTHKARREN
                     RTADQLSQYGAVSLREQARYLDNNHDLVIGVFDKLEERVVGKNGIIVEPHPVLRNGAI
                     ARDLAAEIRTRWSEWSVSPEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSLTP
                     SAGVHFWLEALEPDFIPMTSDESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKE
                     VDAERMLHLKFVRRLHQMRGTSLLSGVLIRLSALKEYEDSELTAARIAAALGMYIRKG
                     DGQSYETDGNDSKENERELTIQPGIIYDDLKPGEEIGMVKSDRPNPNLETFRNGQLRA
                     VAAGSRLSFSSTARNYNGTYSAQRQELVESTDGYLILQDWFIGAVTRPMYRAWLKQAV
                     ASGVIRLPRDLDRSSLYTAVYSGPVMPWIDPVKEAEAWKIQIRGGAATESDWVRAGGR
                     NPDDVKRRRKAEIDENRKLDLVFDTDPASDKGGSSAATKRQEPQHTDDQSEE"
     gene            4338..6365
                     /locus_tag="RHX79_002827"
     CDS             4338..6365
                     /locus_tag="RHX79_002827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308856.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HDV2197980.1"
                     /translation="MPQRNDRSRSTPTTSPKNNSWFRMQAGHQSDADIYIYDEIGFWG
                     VTAKQFISDLNALGDITHINLHINSPGGDVFEGIAIFNALKTHGASITVYVDGVAASM
                     ASVIAMVGNPVIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVEAVLLPAYAQKTG
                     KTTDEIAAMLADETWMSGAECLAQGFADQVTPAVKAMACIQSKRTEEFKKMPESIRNM
                     ITPPRNSAPRVQDDGPAASRTPVQAAAPVVDENSIRAQVLAEQKARVNGINDLFAMFG
                     GRYQSLQAQCLADPECSLEQAREKLLNEMGRESTPSNKNTPAHIYAGNGNFVGDGIRQ
                     ALMARAGFEKTERDNVYNGMTLREYARMSLTERGIGVSSYNPMQMVGAAFTHSTSDFG
                     NILLDVANKAILQGWEDAPETYEQWTRKGQLSDFKIAHRVGMGGFSALRQVREGAEYK
                     YVTTGDKQATIALATYGELFSITRQAIINDDLNMLTDVPMKLGRAAKSTIADLVYAIL
                     TSNPKISTDNVSLFDKAKHANVLESAAMDVASLDKARQLMRVQKEGERHLNIRPAFVL
                     VPTAMESVANQVIRSSSVKGADINAGIINPVKDFATVIAEPRLDDNSQTTFYMAASKG
                     SDTIEVAYLNGVDTPYIDQMEGFSVDGVTTKVRIDAGVAPVDHRGLVKCTA"
     gene            6452..6775
                     /locus_tag="RHX79_002828"
     CDS             6452..6775
                     /locus_tag="RHX79_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308857.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2190 family protein"
                     /protein_id="HDV2197981.1"
                     /translation="MAKNFVEEGKTVAIVASAAISSGDLVQVGDVFAVALTDIPQGET
                     GDGITEGVFMLPKLKTDDMKTGKKVYLKSGKVQLTNSGSDPLVGVVWADAGTSAEEVP
                     VKLNV"
     gene            6768..7043
                     /locus_tag="RHX79_002829"
     CDS             6768..7043
                     /locus_tag="RHX79_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA breaking-rejoining protein"
                     /protein_id="HDV2197982.1"
                     /translation="MSDPFSRLAARMDAITVRKMGKTASINDVDMTVIPGETLAELNA
                     LSGPAVSLVVFSSGYRPRRGDRVVYDGQQWTVTRHERFNGKPMIFIE"
     gene            7055..7633
                     /locus_tag="RHX79_002830"
     CDS             7055..7633
                     /locus_tag="RHX79_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2197983.1"
                     /translation="MKGLENAIRNLNSLDTRMVPQASAWAINRVAQKAVSVATRQVAG
                     NTVAGDNQVKGIPLKLVRQRVRVFKASPSGKMTARIRVNRGNLPAIKLGTARVRLARR
                     GGKLQYRGSVLKVGKYLFRDAFIQQLANGRWHVMRRIDGKNRYPIDVVKIPLSGPLTQ
                     AFEDARDHIIAAEMPKQLGYALKQQLRLWLTR"
     gene            7630..8031
                     /locus_tag="RHX79_002831"
     CDS             7630..8031
                     /locus_tag="RHX79_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2197984.1"
                     /translation="MNRHTQIRQAVLARLREQCGDSATFFDGLPAFIDAQELPAVAVW
                     LSDAQYTGKMTDEDDWQAVLHIAVFIRAQAPDSELDMWMESTIFPALNDIPALSGLID
                     TLIPLGFNYQRDNEMATWAMAEITYQITYTN"
     gene            8042..8785
                     /locus_tag="RHX79_002832"
     CDS             8042..8785
                     /locus_tag="RHX79_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2197985.1"
                     /translation="MTTPNPLAKTKGAGTTFWMYTGNGDAFANPLSDTDWLRLAMVKD
                     LQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDS
                     GEVCAFRIKYPNGTVDVFRGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEGTETVS
                     VTGLTVSPSSASVKVGATTTLTFTVKPDGASDKAISVHSSDPQTATVTLNGLVATVKG
                     VKQGSVSIVGMTADGNFVAVTAVTVSAAG"
     gene            8846..9232
                     /locus_tag="RHX79_002833"
     CDS             8846..9232
                     /locus_tag="RHX79_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
                     /protein_id="HDV2197986.1"
                     /translation="MFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAGEG
                     ELPEAERQIAFLRMGMDINAWLVSRSLWNADQSKDVETLCASVITTWSYDALGAGAEM
                     VLSLSGMGAIENAGDLEHEVLTPEKS"
     gene            9241..9570
                     /locus_tag="RHX79_002834"
     CDS             9241..9570
                     /locus_tag="RHX79_002834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
                     /protein_id="HDV2197987.1"
                     /translation="MQFVMRLAREYRRADWRRMLSEMSATELGEWGDYFRMQSFSDVW
                     MDAQFASLKALIVRMVSGSSDAAVADFSLLPEVNGIPERTDEELMHLGEGISGGVRYG
                     PDSQPGH"
     gene            9542..12607
                     /locus_tag="RHX79_002835"
     CDS             9542..12607
                     /locus_tag="RHX79_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDV2197988.1"
                     /translation="MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAASDAERSSARMQ
                     RFMERQTQAARQTTQAASSAATAASVHAQTVEKNAQAHERMAREVEKTRQRMEALSQK
                     MREEQAQAMDLAEAQDKAAAAFYRQIDSVKQASAGLQELQRIQQQIRQARNSGGIGQQ
                     DYLALISEVTAKTRVLTQAEDEATRQKVAFIRQLKEQATRLNLSSSELLRAKAAQLGV
                     SSAAEVYIRKMEQAGKATHSLGLKSAAARQEIGVLIGELARGNLGALRGSGITLANRA
                     GWIDTLMSPKGMMLGGVIGGIAAAVYGLGKAWYDGQKEGEEFNRQLSLTGHYAGVTAG
                     QLWTLSRAISGNGITQHAAAGALAQVVGSGAFRGNDIGMVARAAAQMERSVGQSVSDT
                     INQFKRLKDDPVNAAKALDNELHFLTATQLEQIRVLGDQGRSSDAARIAMSALAEETG
                     RRTADIDNNLNALGSTLKYLSDLWSRFWDAAMNIGREDSLDEQIAALQEKVSRAKRLP
                     WTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALNRMNET
                     EAARHQREIARINSMQYADQAVRDAAIQRENERYEKALASGKKKTRETRNDEATRLLL
                     QYSQQQAQVEGQIAAARQSAGIATEKMTEAHKQLLALQQRISDLDGKKLTADEKSVLA
                     RKDELIQALTLLDVKQQELQKQTALNDLKKKTIQLTSQLAEEERAQRQQHDLDIATVG
                     MGDQQRQRYQVQLSLRQKYQQQLEQLRRDSEQKGTYNTDDYRKAEQALTESLNRQLNE
                     NRRYWQQLEVVQGNWKNGVLRAFQDFTVDADNTAGTAEQVFSSAFSNMGNGLATFVTT
                     GKLNFKSFTSSVLSDMAKILAQATMMKSIKGIGSVLGFDLSSLSLNANGGIYQSADLS
                     RYSGTVVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADIGGSGMAMFAPQ
                     YNIEINNDGTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGAYR"
     gene            12607..12936
                     /locus_tag="RHX79_002836"
     CDS             12607..12936
                     /locus_tag="RHX79_002836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2197989.1"
                     /translation="METFHWKVRPDMNVVSEPKVVTVKLGDGYEQRRAAGLNNQLSTY
                     SVKIRVRKCEHPSLKAFLERHGGVRAFQWTPPYDWKPIRVVCRKWSASVGALWVTITA
                     DFEQVVA"
     gene            12946..13644
                     /locus_tag="RHX79_002837"
     CDS             12946..13644
                     /locus_tag="RHX79_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDV2197990.1"
                     /translation="MQDIPQETHHETTRLTQSAQVVLWEIDLTVVGGERYFFCNEQNE
                     KGEPVTWQGRQYQAYPIQGTGFELNGKGSAARPTLTVSNLHGMVTGMAEDLQSLVGGT
                     VVRRKVYARFLDAVNFVNGNSDADPEQEVISRWRIEQCSELSAVSASFVLSTPTETDG
                     AVFPGRIMLANTCTWTYRGDECGYHGPAVADEYDQPTSDITKDKCSKCLSGCKFRNNV
                     GNFGGFLSINKLSQ"
     gene            13650..14393
                     /locus_tag="RHX79_002838"
     CDS             13650..14393
                     /locus_tag="RHX79_002838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2197991.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVVSTPEGERYFPCVNISGEPE
                     AYFRMSPEDWLQAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGTIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNLEAT
                     GLYQVPLSAAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHRAWHASAFTGIYNDLAAASTFE"
     gene            14291..14938
                     /locus_tag="RHX79_002839"
     CDS             14291..14938
                     /locus_tag="RHX79_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDV2197992.1"
                     /translation="MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGSEAIRAL
                     AMQIPAFRQKLSDGWYQVRIAGRDAGETELSARLNEPLANGAVIHIVPRLAGAKSGGV
                     FQVVLGAALIAVAWWNPVGWLGAAAVSGMYAAGASMILGGVAQMLAPKARTPTAASTD
                     NGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDSGQVVVIGR"
     gene            14999..18412
                     /locus_tag="RHX79_002840"
     CDS             14999..18412
                     /locus_tag="RHX79_002840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HDV2197993.1"
                     /translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVEGPVDGLKS
                     VLLNSTPVLDSEGNTNISGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITR
                     TITSANIDRLRFTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
                     SQYLASVVVDNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
                     GVQVDSEQFGSQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTFKPAYSNNMAWCL
                     WDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSAL
                     KDRHNAVEVNWIDPNNGWETATELVEDTQAIARYGRNVTKMDAFGCTCRGQAHRAGLW
                     LIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISIGGRVLAVNSQTRTLTLD
                     REITLPSSGTTLISLVDGSGNPVSVEVQSVTDGVKVKVSRVPDGVAGYSVWGLKLPTL
                     RQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHL
                     TAEVTADSGEYQVLARWDTPKVVKGVSFMLRLTVAADDGSERLVSTARTTETTYRFTQ
                     LALGNYTLTVRAVNAWGQQGDPASVSFRIAAPATPSRIELTPGYFQITATPHLAVYDP
                     TVQFEFWFSEKRITDIRQVETTARYLGTALYWIAASINIKPGHDYYFYIRSVNTVGKS
                     TFVEAVGRASDDAEGYLDFFKGQITESHLGKELLEKVDLTEDNASRLEEFSKEWKDAN
                     DKWNAMWGVKIEQTKDGKHYVAGLGLSMEDTEEGKLSQFLVAANRIAFIDPANGNETP
                     MFVAQGNQIFMNDVFLKRLTAPTITSGGNPPVFSLTPDGKLTAKNADISGSVNANSGT
                     LNNVTINENCTIKGMLEANQVRGDFVKTVSKSFPKKAGTWGNTETPDGTVTVTISDDH
                     NFDRQIIIPPIIFNGIAYDDPGSGDNPGGTRYTGYGFEVRKNGVLIASRETKGAIPGS
                     YSAVIDMPSGRGSVTLEFKIFQKGNQGAGNITDCTVIVTKKAASGISIR"
     gene            18483..>18569
                     /locus_tag="RHX79_002841"
     CDS             18483..>18569
                     /locus_tag="RHX79_002841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HDV2197994.1"
                     /translation="MRKVCAAILSAAICLVVSGAPAWASEHQS"
BASE COUNT         4454 a         4386 c         5701 g         4028 t
ORIGIN      
        1 ataaataaac atgattttca cctgccagat ggagttgctt atgtcaaatg tgagcgggat
       61 cggtgatgct tattactgga gtgtttttaa aatcgctgag gcctttgggc ttcaccggga
      121 cacagtaaaa aaacggcttc tcgcggccaa cactcctgtg gctgcgactg tcagggggaa
      181 ccccgtttac gccctgcagc atgtcgggcc agccctgttt agtgtgaagc atgaggcagc
      241 agactctgtt catgatccat cccgtatgga gccgaaagag agaaaggact ggtaccagtc
      301 tgaaaatgaa aggatcaagc tggaaaagga gcagcgaaaa ctcatccccg ttgatgaagt
      361 agtcatcgtc tattcgtcca tgagaaaggc tgtcgtccag gttctggaga caattccgga
      421 tgttcttgaa cgcgattgcg ccctgactcc tcaggccgtc ggcgttgtac agcaggcaat
      481 tgatgacctg cgatacactc ttcaggaaaa atcctacgag gcttgtgctg ctgaattaat
      541 tcctgatgag gaaggagaga gtctctagga ggaataatgg gtttttcatc agcccgaaat
      601 ttgggaaggg acatatcggc aggattttcc ccaccacgtc gcatgccgat ttcggaggct
      661 gttaaaaaat tcatgcgtgt tcccaagggg gctggtaact cggtgccatg ggatcctgaa
      721 ctgacaccct acatcattga gcccatgaac tgcctggcat cgcgtgaata cgatgcggtg
      781 atttttgttg gtcctgcgcg aacagggaag accattggtc tgatcgatgg atggattgtc
      841 tataccatcg tttgcgatcc ttcggacatg ctcgttgtgc agatgaccga agataaggcc
      901 cgcgagcatt ctaaaaagcg cctcgacaga acgttcagaa gcagtgcggc ggtaaagaaa
      961 agaatgagtc cacgtcgtaa cgacaataat gtccatgata agacgttcag ggatggctcg
     1021 ttccttaaaa ttggttggcc ctcggtcaac attatgtcgt cgtcggatta ccggtttgtc
     1081 gccttaaccg attacgaccg ttttccggag aatatcgaca gcgagggtga tggtttctcc
     1141 ctggcctcaa aacgtaccac cacatttatg tccgccggga tgactctggt ggagagctcg
     1201 ccgggacgtg acatctgcga cagcaaatgg cgacgtaagt cgcctcatga agcgccaccg
     1261 acgactggta ttctttccct ttacaatcgt ggtgaccgcc gccgctggta ctggtcatgt
     1321 ccgcactgcg gtgaatattt tcagccagcc atggatgcca tgaccggcta ccgtaatgaa
     1381 ccggatccct ttaaagccag tgaggcggcg tatctacttt gcccgcactg cagcggcatt
     1441 atcactgcgg agaaaaagcg tgagctcaat agtgcaggag tctggttgcg tgaaggtcag
     1501 gtcattgatc gtaacggcaa cgtttccggt gaaccgcgcc gctcccgtat cgccagtttc
     1561 tggatggaag ggccagctgc tgcgtatcag acctgggcgc aactggttta caaattactg
     1621 actgcagaac aggagtatga agcgacagga agcgaagaaa cactcagggc ggttatcaac
     1681 accgactggg gattgcctta tcttcctcgt gccagcatgg agcaacgaaa aagtgaactg
     1741 cttgagcagc gggcagagcc agttccttcc cgcagtgtgc cggatggcat taatttcctt
     1801 gtggcgacag tggatgtgca ggcgggacgt catcgccgtt ttgtggttca ggtaacgggc
     1861 tatggcagtc gtggcgaacg ctggattatt gatcgttaca acatcacgca gtcattgcgc
     1921 agtgactgcg acggggagag ccagcgaatt gatccggcca gctatccgga agactgggat
     1981 gtcctgctga cggatgtttt tcataaaagc tggccgctgg cctccgatcc ttctcaacaa
     2041 atgcgactga tggcaatggc ggtggactcc ggcggtgaag acggggtcac tgataatgcc
     2101 tataaattct ggcgtcgttg ccgtcgtgat ggccttggta aacgtattta cctgtttaag
     2161 ggtgacagca tccggcgcgc aaaactgatc agccgtacat tccctgataa caccggacga
     2221 acgggccgcc gggcgcaggc cgcaggtgat gtgccgctct ggcttcttca gacggatgcc
     2281 ctgaaagacc gggtgaataa cgcgttatgg cgtgactcgc caggtccagg ctatgtgcat
     2341 ttccctgact ggctggggag ctggttttac gacgaactga cgtatgaaga gcggagccgt
     2401 gacgggaaat ggagtaagcc gggtcgcggt gccaacgaag cttttgacct gatggtgtat
     2461 gccgaggctc tggtcattct gcatggatac gaaaagatcc gctggccgga tgcaccggag
     2521 tgggcgagcc gggaaacctg gctggagtgt gtccaggaca gtaccgaacc gtcatcctca
     2581 ccggaaccgg tatccacgcc tgttaaaaaa caaaaacgga agaaaacagt aactgacgat
     2641 gttaacccct ggctgacttc cggaggatgg ttatgaacca gaatgatatc gaagccatga
     2701 ttcagcgtta tacggaagct gaaatggcgg tgctggacgg aaaatccgtc acttttaatg
     2761 gtcagcagat gaccatggaa aacttatctg agatccggca ggggcggcag gagtgggagc
     2821 gccgccttgc ggctctgatt acacgacgac gggggcatcc cgggtaccgg ctggcgaggt
     2881 tctgatggca attcttgatg atgtgattgg cgttttttca ccaggatgga aagcggcaag
     2941 gctgcgttcc cgtgcggtga tccaggctta tgaggccgta aaaacgacgc ggacacacaa
     3001 agcccgacgg gagaaccgaa ctgccgacca gttaagccag tacggggccg tgtcgttacg
     3061 tgagcaggcc cgttaccttg ataacaacca cgatctggtc attggtgtat ttgacaagct
     3121 ggaagaacgg gtggtgggga aaaacgggat tattgtcgag ccacatccgg tattacgcaa
     3181 tggggccatt gcccgtgatc tggcagcgga gatacgcacc cgatggagtg aatggtctgt
     3241 cagtccggaa gtcaccgggc agtttacccg tccgatgctg gaacgtctga tgctgcgtac
     3301 ctggctgcgc gatggtgagg tgtttgccca gatggtttcc gggcgcataa acagcctgac
     3361 gccttctgcc ggtgttcatt tctggctgga ggcgctcgag ccggacttta ttcccatgac
     3421 cagtgatgag agcaacaggc tgaatcaggg cgtgtttgtt gatgactggg gacgtcccga
     3481 aaaatatctg gtgtataaaa gccgtcccgt atccgggcgg cagatggaaa ccaaagaagt
     3541 ggatgcagag cgaatgctgc atcttaaatt tgttcgccgt ctgcaccaga tgcgcgggac
     3601 gtctttgttg tccggtgtgc tgatccgcct cagtgctctg aaagagtatg aagattctga
     3661 gctgactgca gcaaggatcg ccgctgctct ggggatgtac atccggaaag gcgacggaca
     3721 gagctatgaa acggatggta atgacagcaa ggagaatgaa cgcgagctta ccattcagcc
     3781 aggcattatt tacgacgatc tgaaacccgg cgaagaaatc ggaatggtga agtcggatcg
     3841 ccccaatcct aaccttgaaa cttttcgtaa tggtcagttg cgtgccgtgg ctgcgggcag
     3901 tcgtctgagt ttttccagta cagcgcgcaa ctataacggc acttacagcg cccagcgtca
     3961 ggagctggtt gaatctactg atggctacct gatcctgcag gactggttta ttggtgccgt
     4021 cacccgcccg atgtaccgtg cctggctgaa acaggctgtg gcatccggtg ttatcaggct
     4081 accccgcgat ctggaccgat cttcactgta taccgcggtg tattccggac cggtgatgcc
     4141 gtggattgac cctgttaagg aggctgaggc ctggaaaatt cagattcgtg gtggagcggc
     4201 gacagaatca gactgggtac gtgcaggtgg tcgtaatcca gatgatgtca aacgtcggcg
     4261 caaggccgaa attgatgaaa accgcaagct ggatctggta tttgataccg atccggccag
     4321 tgataaagga ggcagcagtg ccgcaacgaa acgacaggag ccgcagcaca ccgacgacca
     4381 gtccgaagaa taattcctgg ttcaggatgc aggcaggtca ccagagtgac gcggatattt
     4441 atatttatga cgagattggt ttctggggtg ttacggcgaa gcagtttatc agtgatctga
     4501 atgcactggg cgatatcacc cacattaatc tccatattaa ttcaccgggt ggcgatgtct
     4561 ttgaaggcat cgccattttt aatgcactga aaacacatgg tgcgtctatt accgtttatg
     4621 tcgacggtgt ggcggcgtca atggcgtcgg tcattgcgat ggtgggaaac ccggtcatta
     4681 tgccggaaaa ctccttcatg atgattcata aaccatttgg ctttacgggc ggtgatgcgg
     4741 aggacatgcg cacctatgcc gacctgctcg ataaagttga ggcggttctg ttacccgctt
     4801 atgcacagaa aaccgggaaa accaccgatg aaattgctgc catgctggcg gatgagacct
     4861 ggatgtccgg tgccgaatgt ctggcacagg gatttgctga tcaggtgaca ccagccgtta
     4921 aggcaatggc atgtattcag tcaaaacgta cagaggaatt taaaaagatg ccggaatcca
     4981 ttcgaaatat gattactccg ccacgcaaca gtgctccacg cgtacaggat gatggacctg
     5041 cagcctcccg gacgccagtg caggcagcag cacccgtggt ggatgaaaac agcatccgtg
     5101 cgcaggtcct ggcagagcaa aaagcgcgtg taaacggtat taatgatctg tttgccatgt
     5161 ttggcgggcg ttatcagtcg ttgcaggctc agtgtcttgc cgatcctgaa tgttcgctgg
     5221 agcaggcccg cgaaaagctg ttgaacgaga tggggcgcga gtccacgcca tccaataaaa
     5281 ataccccggc tcatatttat gccggtaacg gtaattttgt gggggacggg atccggcagg
     5341 cgctgatggc gcgcgccggg tttgaaaaaa ctgaacgtga taatgtctac aacgggatga
     5401 ccctgcgtga atatgcccgt atgtcactga ctgaacgtgg tattggtgtt tccagttata
     5461 acccgatgca gatggtcggt gcggcgttca cacacagtac gtctgacttc ggtaatattc
     5521 tgctggatgt tgcgaacaaa gccattctgc agggctggga agatgcccct gaaacctatg
     5581 aacagtggac gcggaaaggt cagttgtctg attttaaaat tgcccatcgt gtgggtatgg
     5641 ggggcttcag tgctctgcgt caggtgcgtg aaggggcaga atataaatac gtcaccaccg
     5701 gagataaaca ggccactatt gcactggcga cctatggcga gctgttcagt atcacccgtc
     5761 aggccattat caatgatgat ctgaatatgc tgaccgatgt cccgatgaag ctgggccgtg
     5821 cggcgaaatc cactattgcc gatctggttt atgccattct gacgtctaac ccgaaaatct
     5881 ccacagataa tgtaagtctg ttcgataaag cgaaacatgc aaacgtactg gagagcgcgg
     5941 caatggacgt ggcatcgctg gataaagccc gccagttgat gcgcgttcag aaagagggtg
     6001 agcgtcatct gaatattcgt cctgcgttcg tactggtacc gacggcgatg gagtctgttg
     6061 ctaaccaggt cattcgctcc tcaagtgtca agggggctga cattaacgcc ggtattatta
     6121 acccggtgaa agattttgcg accgttattg cagagcctcg tcttgatgat aacagccaga
     6181 ccaccttcta catggctgcg tccaaaggct ccgatacgat tgaagtggct tatctcaacg
     6241 gtgtggatac gccatatatt gatcagatgg agggcttcag tgtggatggc gtgacaacga
     6301 aagtgcgtat tgacgctggt gttgcgccag ttgatcaccg cggcctggtg aaatgtacgg
     6361 cgtaaacgtc gcagacaaca actctgatgg cccgtaaggg ctttttttgt acctgaaatc
     6421 agcccctgaa cggggctgtg cggagacagt tatggcaaag aattttgtag aagaaggaaa
     6481 aacggtggcg attgttgcca gtgcagccat cagcagcgga gatctggtgc aggtgggtga
     6541 tgtttttgcg gtggcgctga ccgatattcc acagggagaa acaggcgacg gcataaccga
     6601 aggtgtgttt atgctgccta agctgaaaac ggatgacatg aaaacgggta agaaggttta
     6661 tctgaagtca ggaaaagttc agctgactaa cagcggctct gatccgctgg tcggggttgt
     6721 ctgggcagat gccggaacca gtgcagaaga agtgccggta aaactcaatg tctgatccct
     6781 tttcccggct ggcagcgcgt atggatgcga tcacggtcag aaagatggga aagacagcct
     6841 cgattaatga tgtcgatatg actgtgattc cgggagaaac actggcagag ctgaatgctc
     6901 tgtccggacc tgcggtctct ctggtggtgt tttcttcggg ataccgccca cggcgcgggg
     6961 atcgcgttgt ttatgacgga caacaatgga cggtcacacg gcatgaacgt tttaacggta
     7021 agccaatgat ctttattgag taaagaggtg tgggatgaag gggcttgaga atgccatccg
     7081 caatctgaac agccttgata cccgtatggt gccacaggct agcgcatggg cgataaaccg
     7141 tgtggcacag aaagcggtct cggttgccac ccggcaggtt gccgggaata ccgttgcggg
     7201 agataaccag gtgaaaggga tccccctgaa actggtacgt cagcgtgtcc gggtgtttaa
     7261 agccagtccg tcaggaaaaa tgacggctag gatccgcgtt aaccggggca atctgcccgc
     7321 cattaagctg gggacagccc gggtcagact ggcccggcgt ggtggaaaac tgcagtaccg
     7381 tggcagtgtg ctgaaggtgg ggaaatatct tttccgggat gcgtttattc agcaactggc
     7441 gaatggtcgc tggcatgtga tgcgacgtat tgatggcaaa aatcgttacc ccattgatgt
     7501 ggtgaaaatc ccgctgtccg gaccgctgac acaggcattt gaagatgccc gcgaccacat
     7561 cattgctgcg gaaatgccga aacagctggg gtatgcactg aaacaacaac tgaggttatg
     7621 gctgacccga tgaaccgaca tacacaaatc cgccaggccg tactggcacg ccttcgggaa
     7681 cagtgtggag acagcgccac gttttttgac gggcttccgg catttattga tgcgcaggaa
     7741 ctgcctgccg tggcggtgtg gctgagtgat gctcagtaca ccggaaaaat gacggatgaa
     7801 gatgactggc aggctgttct gcatattgcc gtcttcatcc gggcacaggc accggattca
     7861 gagctggata tgtggatgga gagcaccatt ttccctgccc tgaatgatat accggcactt
     7921 tccggactca tcgacaccct gatcccactc ggttttaact atcaacgtga taatgagatg
     7981 gccacctggg cgatggcgga aatcacgtac cagatcacgt acacgaatta aggaggtggt
     8041 aatgaccaca ccaaatccac tggcaaagac gaaaggtgcg gggacgacgt tctggatgta
     8101 taccggcaac ggcgatgcgt ttgcgaaccc tttgtcggac actgactggc tgcgtcttgc
     8161 gatggtgaag gatctgcaac ctggcgaaat gaccgctgat gcagaagatg acacttatct
     8221 cgatgatgaa gatgcagact ggaaaacgac aacccagggg cagaaatccg ttggtgatac
     8281 ttcggcgacg ctggcctggc gtccgggtga cagcgggcag aaaaaactgg ttcagttgtt
     8341 cgactccggt gaagtctgcg cgtttcgtat caaatatccc aacggcactg ttgatgtttt
     8401 ccgtggctgg ctgagctcac tgggtaaaac cattgcctca aaagacgtga tgacccgcac
     8461 tgtgaaaatc agcggtgtgg ggcgtccgta tctggcagag gaaggcactg aaaccgtgag
     8521 cgttaccggg ctgacagtat caccgtcgtc tgccagtgta aaagtgggag caaccaccac
     8581 gctgaccttt acagtaaaac ctgacggagc cagtgacaaa gcgatcagtg tgcattcgtc
     8641 agatccacag actgccacgg ttaccctgaa cggacttgtg gccacggtaa aaggcgtgaa
     8701 gcagggcagt gtcagcattg tgggcatgac cgctgacggg aattttgtgg ctgtgactgc
     8761 ggtgactgtc agcgcagcag gttaacagga cgatactcat catttgcccc ggttattcgg
     8821 ggcttttttg caggtggaga acatgatgtt tctgaaacag gacacgttta attatgaaaa
     8881 acagtccgtg gtgctcagtg agctgtccgg gctgcagaga attgaatatc tgacgtttgt
     8941 tcagcagcga acggcaaagt ttgatgccgg ggagggagaa ctgccggagg ctgaacgaca
     9001 gattgctttt ctgcggatgg ggatggatat caatgcctgg ctggtttccc gctcactgtg
     9061 gaatgcggat cagtctaagg atgtagagac gctttgcgca tccgttatta caacatggtc
     9121 gtatgatgcc ctgggtgcgg gggcggagat ggttctgtcg ctgagcggta tgggggccat
     9181 tgagaatgcc ggggatttgg agcatgaggt gctgacgccg gaaaagtcct gacgcgggaa
     9241 atgcagtttg tcatgcggct tgcccgggag taccggcggg cagactggcg gcggatgctg
     9301 tcggaaatgt cggccactga gcttggtgag tggggcgatt atttccggat gcagagcttc
     9361 agtgatgtgt ggatggatgc gcagtttgcc tcgctgaagg cattgatcgt gagaatggtg
     9421 tccggcagca gtgatgctgc ggtggctgat ttcagccttt taccggaagt gaacgggata
     9481 ccggagcgaa cggacgaaga actgatgcat cttggggaag gtatttccgg aggtgtgcgt
     9541 tatggaccag atagccaacc tggtcattga tttggggatt gatgcggcag agtttaaaaa
     9601 tgaaattccc cgtatcaaaa accttctgaa tggtgcagcc agcgatgcag aacggtcttc
     9661 tgcccgtatg cagcgtttta tggagcgtca gactcaggcc gcccggcaga caacgcaggc
     9721 agcttcttcg gctgcaacag ccgcatccgt ccatgcgcag acggtggaga agaacgcaca
     9781 ggctcatgaa cgcatggccc gcgaggtgga gaaaacccgc cagcgcatgg aggcactgag
     9841 ccagaaaatg cgcgaggaac aggcgcaggc catggatctg gcggaggctc aggataaagc
     9901 ggctgctgcg ttttatcgtc agattgacag tgtgaaacag gccagtgcgg ggctgcagga
     9961 attacagcgt attcagcagc agatccgaca ggccagaaac agtggcggga ttggtcagca
    10021 ggattatctg gcgctgattt ctgaggttac tgcgaaaact cgtgttctta cacaggctga
    10081 ggacgaggct acccgacaga aagtggcgtt tatccgtcag cttaaagagc aggcaacccg
    10141 cctgaatctt tcatcttctg agttgcttcg tgctaaggca gcccagctgg gggtaagcag
    10201 tgctgcagaa gtgtatatcc gcaaaatgga gcaggcagga aaagccacgc attcgctggg
    10261 tctgaaaagt gcagcagccc gccaggagat aggcgttctg ataggtgaac tggcccgcgg
    10321 caatttaggg gcgctgaggg gatccgggat aacgctggct aaccgtgccg gatggataga
    10381 cacactgatg tcaccgaaag gcatgatgct tggcggggtt attggcggta ttgccgcggc
    10441 cgtctatggt ctgggtaaag cctggtatga cggtcagaag gagggggaag aatttaaccg
    10501 ccagttgtcg ctgacggggc attatgccgg agtcactgcc gggcagctgt ggacgctcag
    10561 tcgtgctatt tccgggaatg gtatcacgca acatgctgca gccggtgcgc tggctcaggt
    10621 ggtggggagt ggtgcatttc gtggaaacga tatcggtatg gtggcgagag ctgccgcaca
    10681 gatggagcga tcggttggcc agtcggtcag cgataccata aatcagttta agcggctaaa
    10741 agatgatcct gtaaatgccg cgaaggctct ggacaatgag ctgcattttc ttactgccac
    10801 tcagcttgag cagatacgtg tccttgggga tcagggacgg tccagtgatg ctgcacggat
    10861 agccatgtct gcactggcag aggaaaccgg tcggcgtact gcggatattg ataataacct
    10921 caatgcgctt ggcagtacgc tgaagtatct gtctgatttg tggagtcgtt tctgggatgc
    10981 ggccatgaat attggtcgtg aagactcgct ggatgaacag attgccgctt tacaggagaa
    11041 agtgtcgcgg gcgaaaagac tcccctggac ggcatcatct tctcaggttg aatacgatca
    11101 gcagcgtctt aacgatcttc aggagaaaaa acgccagaag gatttgcagg atgcaaaaga
    11161 gcaggcagag cggaattatc aggagcaaca gaaacgacgt aatgctgaaa atgctgcact
    11221 gaaccggatg aatgaaacgg aagcagcacg acatcagcgt gaaattgcgc gtattaattc
    11281 catgcagtac gccgatcagg ctgtcaggga tgcagcgata caacgtgaaa atgaacgtta
    11341 cgagaaagcc ctggcatccg gtaagaaaaa aacacgcgaa acccgtaatg atgaggccac
    11401 ccggttattg ctgcagtaca gtcagcaaca ggcacaggtg gaaggacaga ttgctgctgc
    11461 aagacagtca gcaggcattg ccactgaaaa gatgacagaa gcgcataaac agcttctggc
    11521 tctgcagcag cgcatcagcg atctggacgg gaaaaaactg acggcagatg aaaagagtgt
    11581 gctggcccgt aaagatgaac tgattcaggc actgacgctg ctggatgtaa aacagcagga
    11641 gcttcagaaa cagacggcac tcaacgatct gaagaaaaaa acaattcagc tgaccagtca
    11701 actggctgaa gaagagcgcg ctcagcgtca gcaacatgac ctggatatcg ccacggtggg
    11761 tatgggtgat cagcagcggc agcgatatca ggtacaactg agtcttcgcc agaaatacca
    11821 gcaacagctg gagcagttga ggcgggatag tgagcagaaa gggacatata acacggatga
    11881 ctacagaaag gccgagcagg cgctgacgga gagcctgaac cgacaactga atgagaatcg
    11941 ccgttactgg caacagcttg aagttgtgca gggtaactgg aaaaacggag tcctgcgtgc
    12001 atttcaggat tttaccgtgg atgcagacaa tacggcagga acagcagaac aggtgttctc
    12061 gtcagccttc agcaacatgg gaaatggcct ggcaactttt gtcactaccg gcaaactcaa
    12121 cttcaaatcc ttcacctctt cggtgctgtc agatatggcg aaaatcctgg cgcaggcaac
    12181 catgatgaaa tcgataaaag ggattggcag tgtactggga tttgatctca gcagcctttc
    12241 cctgaatgcc aatgggggga tttatcagtc tgctgatttg agtcgttaca gtggcacggt
    12301 ggttaaccgt ccgacgtttt ttgcttttgc aaaaggcgcg ggtgtgatgg gggaagctgg
    12361 acctgaagcc attctgccac tgcgtcgtgg tgctgacggt aagctggggg ttgtggcgga
    12421 tattggtggt tcaggtatgg cgatgtttgc cccgcagtac aacatcgaga tcaataacga
    12481 tggcacgaac gggcagatag gtccggctgc cctgaaggtg gtttatgacc ttgggaaaaa
    12541 agcagcagcg gactttatgc aacagcaggc ccgtgatggt ggtcggttaa gtggagcata
    12601 tcggtaatgg agacgtttca ctggaaagtg cgcccggata tgaatgtggt atcagagccg
    12661 aaagtggtga cagtgaagct gggcgatggt tatgaacagc gtcgtgcggc gggactgaat
    12721 aaccagttgt cgacttacag cgtgaagata cgtgttcgta aatgtgaaca cccatcttta
    12781 aaagcctttc tggaacggca cggtggcgtc cgcgcatttc agtggacgcc accttatgac
    12841 tggaagccga tcagggtggt ttgtcgtaaa tggtcggcaa gcgtgggggc gttgtgggta
    12901 accataacgg cagattttga acaggtcgtg gcataggagt ctctgatgca ggatattcca
    12961 caggaaacac atcatgagac gacacgcctc actcagtcag cccaggtggt gctctgggaa
    13021 atcgatctga cagtggtcgg tggagaacgt tattttttct gtaatgagca gaacgaaaaa
    13081 ggtgagccgg tcacctggca ggggcgacag tatcaggcgt atcccattca ggggacggga
    13141 tttgaactga acggcaaggg cagtgctgcc cgtccgacac tgacggtttc taacctgcac
    13201 ggcatggtca ccgggatggc ggaagacctg cagagtctgg tcggaggaac ggtggtccgg
    13261 cgtaaggttt acgcccgttt tctggatgcg gtgaacttcg tcaacggaaa cagtgacgcc
    13321 gatccggagc aggaggtgat cagccgctgg cgcatcgagc agtgcagtga actgagcgcg
    13381 gtgagtgcct cttttgtact gtccacgccg acggaaacgg acggtgccgt ttttccggga
    13441 cgtatcatgc tggccaacac ctgcacctgg acctatcgcg gtgatgagtg cggttatcac
    13501 ggtccggcgg tcgcggatga atatgaccag ccaacgtccg atatcacgaa ggataaatgc
    13561 agcaaatgcc tgagcggttg taagttccgc aataacgtcg gcaactttgg cggcttcctt
    13621 tccattaaca aactttcgca gtaaatccca tgacacagac agaatcagcg attctggcgc
    13681 acgcccggcg atgtgcgcca gcggagtcgt gcggcttcgt ggtaagcacg ccggaggggg
    13741 aaagatattt cccctgcgtg aatatctccg gtgagccgga ggcgtatttc cgtatgtcgc
    13801 cggaagactg gctgcaggca gaaatgcagg gtgagattgt ggcgctggtc cacagccacc
    13861 ccggtggtct gccctggctg agtgaggccg accggcggct gcaggtgcag agtgatttgc
    13921 cgtggtggct ggtctgccgg gggacgattc ataagttccg ctgtgtgccg catctcaccg
    13981 ggcggcgctt tgagcacggg gtgacggact gttacacgct gttccgggat gcttatcatc
    14041 tggcggggat tgagatgccg gattttcatc gcggggatga ctggtggcgt cacggtcaga
    14101 atctctatct ggataatctg gaggccacag ggctgtatca ggtgccgttg tcagcggcgc
    14161 agccgggcga tgtgctgctg tgctgttttg gttcatcggt gccgaatcat gccgccattt
    14221 actgtggtga tggcgagctg ctgcaccata ttcctgaaca actgagcaaa cgagagaggt
    14281 acaccgacaa atggcagcga cgcacacact ccctctggcg tcaccgggca tggcacgcat
    14341 ctgcctttac ggggatttac aacgatttgg ccgccgcatc gaccttcgag tgaaaacggg
    14401 gtccgaagcc atccgggcgc tggccatgca gatcccggcg tttcgtcaga aactgagcga
    14461 cggctggtac caggtacgca ttgccgggcg tgatgcaggt gaaaccgaat tgtctgcccg
    14521 tcttaatgag ccgctggcaa atggtgccgt gatccacatc gtgccgcgtc tggcgggagc
    14581 taaaagtggc ggtgtgtttc aggtggtgct gggggcggcg ctgattgcgg tggcatggtg
    14641 gaaccctgtg ggctggctgg gtgccgcggc tgtatcgggc atgtatgcgg caggggccag
    14701 tatgatcctg ggcggagtgg cgcagatgtt ggcaccgaaa gccaggacgc ccacggcagc
    14761 aagtacagat aacggcaaac agaacaccta tttctcctca ctggataaca tggttgccca
    14821 gggcaatgtt ctgcccgttc tgtacggtga aatgcgcgtg gggtcgcggg tggtctctca
    14881 ggagatcagc acggcagacg aaggggatag tggtcaggtt gtggtgattg gtcgctgatg
    14941 caaaatgttt tatgtgaaac cgcctgcggg cggttttgtc gtttatggag cgtgacgaat
    15001 gggtaaaggc agcagtaagg ggcatacccc gcgcgaagcg aaggacaacc tgaagtccac
    15061 gcagctgctg agtgtgatcg atgccatcag cgaagggccg gttgaaggtc cggtggatgg
    15121 attaaaaagc gtgctgctga acagtacgcc ggtgctggac agtgagggga ataccaatat
    15181 ctccggcgtc acggtggtgt tccgggcagg tgagcaggag cagacaccgc cggagggatt
    15241 tgaatcctcc ggctccgaga cggtgctggg tacggaagtg aaatatgaca cgccgatcac
    15301 ccggaccatc acgtcggcaa acattgaccg tctgcgtttt actttcggcg tgcaggcact
    15361 ggtggaaacc acctcaaagg gtgatcggaa tccgtcggaa gtccgcctgc tggttcagat
    15421 acagcgtaat ggtggctggg tgacggaaaa agacatcacc attaagggca aaaccacgtc
    15481 gcagtatctg gcctcggtgg tggtggataa cctgccgccg cgcccgttta atatccggat
    15541 gcgcaggatg acgccggaca gcaccacaga ccagctgcag aacaaaacgc tctggtcgtc
    15601 atacaccgaa atcatcgatg tgaaacagtg ctacccgaac acggcactgg tcggcgtgca
    15661 ggtggactcg gagcagttcg gcagccagca ggtgagccgt aattatcatc tgcgcgggcg
    15721 tattctgcag gtgccgtcga attataaccc gcagacgcgg caatacagcg gtatctggga
    15781 cggaacgttt aaaccggcat acagcaacaa catggcctgg tgtctgtggg atatgctgac
    15841 ccatccgcgc tacggcatgg ggaaacgtct tggtgcggcg gatgtggata aatgggcgct
    15901 gtatgtcatc ggccagtact gcgaccagtc agtgccggac ggctttggcg gcacggagcc
    15961 gcgcatcacc tgtaatgcgt acctgaccac acagcgcaag gcgtgggatg tgctcagtga
    16021 tttctgctcg gcgatgcgct gtatgccggt atggaacggg cagacgctga cgttcgtgca
    16081 ggaccgaccg tcggataagg tgtggaccta taaccgcagt aatgtggtga tgccggatga
    16141 tggcgcgccg ttccgctaca gcttcagcgc cctgaaggac cgccataatg ccgttgaggt
    16201 gaactggatt gacccgaaca acggctggga gacggcgaca gagcttgttg aagatacgca
    16261 ggccattgcc cgttacggtc gtaatgttac gaagatggat gcctttggct gtacctgccg
    16321 ggggcaggca caccgcgccg ggctgtggct gattaaaacg gagctgctgg agacgcagac
    16381 cgtggatttc agcgtgggtg ccgaagggct tcgccatgtg ccgggtgatg ttattgaaat
    16441 ctgcgatgat gactatgcgg ggatcagcat cggcgggcgc gtgctggcgg tgaacagcca
    16501 gacccggacg ctgacgcttg accgtgaaat cacgctgcca tcctccggta ccacgctgat
    16561 aagcctggtt gacggaagtg gcaatccggt cagcgtggag gtccagtccg tcaccgacgg
    16621 cgtgaaggta aaagtgagcc gtgttcctga cggcgttgcc ggatacagcg tatgggggct
    16681 gaagctgccg acgctgcgcc agcgtctgtt ccgctgcgtg agtatccgtg agaacgatga
    16741 cggcacgtat gccatcaccg ccgtgcagca tgtaccggaa aaagaggcca tcgtggataa
    16801 cggggcgcac tttgacggcg accagagcgg cacggtgaat ggtgtcacgc cgccagcggt
    16861 gcagcacctg actgccgaag tcaccgcaga cagcggggaa tatcaggtgc tggcgcgctg
    16921 ggacacgccg aaggtggtga agggggtgag ctttatgctt cgcctgaccg tggcagcgga
    16981 tgacggcagt gagcggctgg tcagcacggc ccggacgacg gaaaccacat accgcttcac
    17041 gcaactggcg ctggggaact acacgctgac agtccgggcg gtaaatgcgt ggggacagca
    17101 gggcgatccg gcgtcggtat cgttccggat tgccgcaccg gcaacaccgt cgaggattga
    17161 gctgacgccg ggctattttc agataaccgc cacgccgcat cttgccgttt atgacccgac
    17221 agtacagttt gagttctggt tctcggaaaa gcggattacc gatatcaggc aggttgaaac
    17281 cacagcccgc tatcttggta cggcgctgta ctggatagcc gccagtatca atatcaaacc
    17341 gggccatgat tattactttt atatccgcag tgtgaacacc gttggcaaat cgacattcgt
    17401 ggaggccgtc ggtcgggcga gcgatgatgc ggaaggttac ctggattttt tcaaaggcca
    17461 gataaccgaa tcccatctcg gcaaggagct gctggaaaaa gtcgacctga cggaggataa
    17521 cgccagcaga ctggaggagt tttcgaaaga gtggaaagac gccaacgata aatggaatgc
    17581 catgtggggc gtcaaaattg agcagaccaa agacggcaaa cattatgtcg cggggcttgg
    17641 cctcagcatg gaggatacag aggaaggcaa actgagccag tttctggttg ctgctaaccg
    17701 tatcgcgttt attgacccgg caaacgggaa tgaaacgccg atgtttgtgg cgcagggcaa
    17761 ccagatattc atgaacgacg tgttcctcaa acgtctgacg gcccccacca ttaccagtgg
    17821 tggaaatcca ccggtatttt ccctgacacc ggacggaaag ctgaccgcta aaaatgcgga
    17881 tatcagtggc agtgtgaatg cgaactccgg gacgctcaac aacgtcacga taaatgaaaa
    17941 ctgtacgatt aagggcatgc tggaggcgaa tcaggtcaga ggtgattttg ttaaaacagt
    18001 atccaaatca ttcccgaaaa aggctggtac gtggggtaat acggaaacac cagacgggac
    18061 agttacagtc accatcagcg atgatcataa ctttgaccgt caaatcatta ttccgcccat
    18121 tatctttaac ggtatagcgt atgacgatcc gggaagtggt gataacccgg gaggtacaag
    18181 gtacacgggg tatggttttg aagttcgcaa aaacggcgta ttaatcgcat ccagagaaac
    18241 taaaggggcc attcccggta gttacagtgc ggttattgat atgccgagtg gcaggggaag
    18301 cgtcactctg gagtttaaga ttttccagaa aggcaatcag ggggcaggca atatcaccga
    18361 ctgtacggtg attgtgacca aaaaggctgc ttccggtatc agtattcgtt gaaattgtta
    18421 taaccccaat aaagggcgtc aggaatgacg ccttttttat tgcagaaaag cgagaggtaa
    18481 ttatgcgtaa agtttgtgca gccattttgt ccgcagccat ctgtctggtc gtatccggtg
    18541 cgcctgcatg ggcgtctgaa catcagtcc
//
LOCUS       DAPGWB010000085        18548 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.085, whole genome shotgun sequence.
ACCESSION   DAPGWB010000085 DAPGWB010000000
VERSION     DAPGWB010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18548
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.085"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            75..1373
                     /gene="dadA"
                     /locus_tag="RHX79_002842"
     CDS             75..1373
                     /gene="dadA"
                     /locus_tag="RHX79_002842"
                     /EC_number="1.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HDV2197995.1"
                     /translation="MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANA
                     GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYM
                     ENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDA
                     GVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKF
                     RFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYS
                     LTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMV
                     VRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQ
                     LLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS"
     gene            1383..2453
                     /gene="dadX"
                     /locus_tag="RHX79_002843"
     CDS             1383..2453
                     /gene="dadX"
                     /locus_tag="RHX79_002843"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309712.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolic alanine racemase DadX"
                     /protein_id="HDV2197996.1"
                     /translation="MTRPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIE
                     RIWSALGATDGFALLNLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHS
                     NWQLKALQNARLKAPLDIYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHF
                     AEAEHPDGISSAMARIEQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPS
                     GQWRDIANTGLRPVMTLSSEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGY
                     PRHAPTGTPVLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAA
                     AAGTVGYELMCALALRVPVVTV"
     gene            complement(2839..4575)
                     /locus_tag="RHX79_002844"
     CDS             complement(2839..4575)
                     /locus_tag="RHX79_002844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HDV2197997.1"
                     /translation="MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML
                     AGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI
                     TSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS
                     NDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIAL
                     PAGLYPLLALSGGILIFALTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW
                     LAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERV
                     FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKV
                     VVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDN
                     QLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGNFILEASAKYA
                     DVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLK
                     IGVRVAEEEAES"
     gene            complement(4670..5584)
                     /gene="ldcA"
                     /locus_tag="RHX79_002845"
     CDS             complement(4670..5584)
                     /gene="ldcA"
                     /locus_tag="RHX79_002845"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muramoyltetrapeptide carboxypeptidase"
                     /protein_id="HDV2197998.1"
                     /translation="MSLFHLIAPSGYCIKQHAALRGIHRLTDEGHQVNNVEVIARRCE
                     RFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLI
                     CGHSDFTAIQCGLLAQGNVITFSGPMLVANFGADELNAFTEHHFWLALRNKTFTIEWQ
                     GEGPTCQTEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYH
                     AGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVT
                     LPLGAHAILNNTREGTQLTISGHPVLKM"
     gene            5684..6295
                     /gene="emtA"
                     /locus_tag="RHX79_002846"
     CDS             5684..6295
                     /gene="emtA"
                     /locus_tag="RHX79_002846"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309714.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     EmtA"
                     /protein_id="HDV2197999.1"
                     /translation="MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQ
                     KAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEP
                     TTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD
                     RKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDAM"
     gene            complement(6297..7031)
                     /locus_tag="RHX79_002847"
     CDS             complement(6297..7031)
                     /locus_tag="RHX79_002847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar brake protein"
                     /protein_id="HDV2198000.1"
                     /translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKIL
                     AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT
                     VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP
                     AELQEGMRFAQIEVNMGQWGVFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSP
                     TVERQLQRIIFSLEREAREKADKVRD"
     gene            7232..7486
                     /locus_tag="RHX79_002848"
     CDS             7232..7486
                     /locus_tag="RHX79_002848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDV2198001.1"
                     /translation="MGIIAWIIFGLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGG
                     WLATMFGIGGSISGFNLHSFLVAVVGAILVLGIFRLLRRE"
     gene            7664..8104
                     /locus_tag="RHX79_002849"
     CDS             7664..8104
                     /locus_tag="RHX79_002849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198002.1"
                     /translation="MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQN
                     TRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALY
                     SQRRRKSPGDESETLTRRNDAIFGNHVWQTFAQYFPPGLEKPSV"
     gene            complement(8183..9879)
                     /gene="treA"
                     /locus_tag="RHX79_002850"
                     /pseudo
     CDS             complement(8183..9879)
                     /gene="treA"
                     /locus_tag="RHX79_002850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415715.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase"
     gene            complement(10199..11617)
                     /gene="dhaM"
                     /locus_tag="RHX79_002851"
     CDS             complement(10199..11617)
                     /gene="dhaM"
                     /locus_tag="RHX79_002851"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaM"
                     /protein_id="HDV2198003.1"
                     /translation="MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNP
                     IGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPKIAAKVRLCAAPLVE
                     GTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTKISDTCPAYDEEARSLAV
                     VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLI
                     AKGPEAEEALIAFRQLAEDNFGETEEVVPPTLRPVPPVSGKAFYYQPVLCTVQAKSTL
                     TVEEEQERLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASEL
                     LQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQ
                     FNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKL
                     YAIQPEETLTLDVKRQRFNRQG"
     gene            complement(11628..12260)
                     /gene="dhaL"
                     /locus_tag="RHX79_002852"
     CDS             complement(11628..12260)
                     /gene="dhaL"
                     /locus_tag="RHX79_002852"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HDV2198004.1"
                     /translation="MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNR
                     GFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLT
                     LEELYQMFRDGVDGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASR
                     IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE"
     gene            complement(12271..13341)
                     /gene="dhaK"
                     /locus_tag="RHX79_002853"
     CDS             complement(12271..13341)
                     /gene="dhaK"
                     /locus_tag="RHX79_002853"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415718.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HDV2198005.1"
                     /translation="MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAG
                     KVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECSMQIDGGEGVLLI
                     IKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLV
                     GAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIH
                     GEPGIDRRSFSSLDQTVDEMFDTLLENGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGD
                     RVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLK
                     VDDETLALWDAPVHTPALNWGK"
     gene            13569..15488
                     /gene="dhaR"
                     /locus_tag="RHX79_002854"
     CDS             13569..15488
                     /gene="dhaR"
                     /locus_tag="RHX79_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415719.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase operon
                     transcriptional regulator DhaR"
                     /protein_id="HDV2198006.1"
                     /translation="MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFA
                     SIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGF
                     NDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRLTGT
                     IALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVIS
                     WDEQGNLQFINAQAARVLRLDATASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFE
                     SQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQT
                     RRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGDAAL
                     AEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITRLDA
                     RRLIPVDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPALVNN
                     KLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSDLPE
                     HLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTLWRK
                     MKQHGIDAGQFKRRV"
     gene            complement(15588..18473)
                     /locus_tag="RHX79_002855"
     CDS             complement(15588..18473)
                     /locus_tag="RHX79_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pertactin family autotransporter"
                     /protein_id="HDV2198007.1"
                     /translation="MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLL
                     IAADTGSQYGTNITINDGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVND
                     ASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDG
                     IIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNN
                     ANGAARFTATDLTIDVQGYSAMGINVQKNSVVDLGTNSSIKTNGDNAHGLWSFGQVSA
                     NALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSDATINFSGTAAQRNS
                     IFSGGSYGASAQTATAVVNMQNTDITVDRNGSLALGLWALSGGRITGDSLAITGAAGA
                     RGIYAMTNSQIDLTSDLVIDMSTPDQMAIATQHDDGYAASRINASGRMLINGSVLSKG
                     GLINLDMHPGSVWTGSSLSDNVNGGKLDVAMNNSVWNVTSNSNLDTLALSHSTVDFAS
                     HGSTAGTFATLNVENLSGNSTFIMRADVVGEGNGVNNKGDLLNISGSSAGNHVLAIRN
                     QGSEATTGNEVLTVVKTTDGAASFSASSQVELGGYLYDVRKNGTNWELYASGTVPEPT
                     PNPEPTPAPAQPPIVNPDPTPEPDPTPNPTPTPKPTTTADAGGNYLNVGYLLNYVENR
                     TLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGFDMGYSGIQFGGDKRLSDVMP
                     LYVGLYIGSTHASPDYSGGDGTARSDYMGMYASYMAHNGFYSDLVVKASRQKNSFHVL
                     DSQNNGVNANGTANGLSISLEAGQRFNLTPTGYGFYIEPQTQLTYSHQNEMAMKASNG
                     LNIHLNHYESLLGRASMILGYDITAGNSQLNMYVKTGAIREFSGDTDYLLNNSREKYS
                     FKGNGWNNGVGVSAQYNKQHTFYLEADYTQSNLFDQKQVNGGYRFSF"
BASE COUNT         4481 a         4631 c         4810 g         4626 t
ORIGIN      
        1 atattttcaa ctgagttatc aagatgtaat tagattatta ttcttttact gtatctaccg
       61 ttatcggagt ggctatgcga gttgtcatac tgggaagtgg tgtggtaggc gttgccagcg
      121 cctggtactt aaatcaggca ggacatgagg tcaccgtcat tgatcgggag ccgggggccg
      181 ccctggaaac cagcgccgcg aatgccgggc aaatctcccc cggatatgct gcaccgtggg
      241 cggcacctgg tgtgccttta aaagcgatca aatggatgtt ccagcgccat gcgccgctgg
      301 cggtccgtct cgacggtacg cagtttcagt tgaaatggat gtggcaaatg ttacgtaact
      361 gcgacaccag ccactacatg gaaaacaaag ggcggatggt gcgtctggcg gaatacagcc
      421 gtgattgcct gaaagcattg cgcgccgaaa ccaatattca gtatgaaggg cgtcagggtg
      481 ggacgctgca actgttccgt accgaacaac agtatgaaaa tgcgacccgc gatatcgccg
      541 tgctggaaga tgccggcgta ccgtatcagc tgctggaatc cagccgcctg gcggaagtgg
      601 agcccgcgct ggcagaagta gcgcacaaac tgacgggtgg tctgcaactg cccaatgatg
      661 aaaccggaga ctgccagctg tttacccaga atctggcgcg gatggcagag caggcggggg
      721 ttaaattccg ctttaatacg cccgttgacc aactgctttg cgacggcgag caaatctacg
      781 gcgtgaagtg tggcgatgaa gtgattaagg ccgatgcgta tgtgatggcg tttggttctt
      841 actcgacggc gatgctcaaa ggcattgttg atattccggt gtatccgctg aaaggctact
      901 cgctgactat tccaattgcg caggaagatg gtgcgccagt atccactatt cttgatgaaa
      961 cctacaaaat cgccattacc cgtttcgata accgcattcg tgttggcgga atggcggaaa
     1021 ttgttggttt taacaccgag ctgttgcaac cgcgtcgtga aacgctggaa atggtggttc
     1081 gcgatctcta tccacgcggc ggtcatgtcg agcaggcgac tttctggacg ggtttgcgcc
     1141 cgatgacgcc agacggtacg ccggttgtcg ggcgtacacg ctttaaaaat ctgtggctga
     1201 ataccggtca cggcacgctc ggctggacga tggcttgcgg ttccggtcag ttgttaagcg
     1261 atctgctctc tggtcgcacg ccagcgatcc catatgagga tctaagcgta gcgcgctaca
     1321 gccgtggatt tacgccatca cgtccgggcc atttacatgg cgcacacagc taaggaaacg
     1381 agatgacccg tccgatacag gccagcctcg atctgcaggc attaaaacag aatctgtcca
     1441 ttgtccgcca ggccgcgccg cacgcgcgcg tctggtcggt ggtaaaagcg aacgcttacg
     1501 ggcatggtat tgagcgtatc tggagcgcgc tcggggccac cgatggcttt gcattactta
     1561 acctggaaga ggcaataacg ttacgtgagc gcggctggaa ggggccgatc ctgatgctgg
     1621 aaggattttt ccatgctcag gatctggaga tttatgacca gcaccgcctg accacctgcg
     1681 tacacagcaa ctggcagctc aaagcactgc aaaatgcgcg gctaaaagca ccgttggata
     1741 tttatcttaa agtgaacagt gggatgaatc ggttgggctt ccagcccgat cgcgtgctta
     1801 ccgtctggca gcagttgcgg gcaatggcga atgttggcga gatgaccctg atgtcgcatt
     1861 ttgccgaagc ggaacatcct gatggaattt ccagcgcgat ggcgcgtatt gagcaggcgg
     1921 cggaagggct ggagtgtcgg cgttcgttgt ccaattcggc ggcgactctg tggcacccgg
     1981 aagcgcattt tgactgggtt cggcctggca ttattttgta tggcgcttcg ccgtccggtc
     2041 agtggcgtga tatcgccaat accggattac gtccggtgat gacgctaagc agtgagatta
     2101 ttggtgtcca gacgctaaaa gcgggtgagc gtgtgggcta cggcggtcgc tatactgcgc
     2161 gcgatgaaca gcgaatcggc attgtcgccg cagggtacgc cgacggttat ccgcgccacg
     2221 cgcctaccgg tacccctgtt ttagtggacg gcgtgcgcac catgacggtg gggaccgtct
     2281 cgatggatat gctagcggtc gatttaacgc cttgcccgca ggcggggatt ggtacgccgg
     2341 ttgagctgtg gggcaaggag atcaaaattg atgatgtcgc cgccgctgcc ggaacggtgg
     2401 gctatgagtt gatgtgcgcg ctggcgttac gcgtcccggt tgtgacagtg taacttgttg
     2461 taagccggat cggagacagc gtcttctggt tgcgaaaaaa tcatccatcc ggctggtcag
     2521 caactgtagt tgttaatgtg acagagccat tgcccatgat agtgtccatt aaaagaatgg
     2581 acactatttc cccggaacct gaactcaccg cacaggcgtt ctacataaaa cgcttacgct
     2641 tcattgttga ctcgaactcg acttcagata aatcacgctt tacccttgat ggagcctgta
     2701 catagatttg tgtaattgcc tgattttgat atgttcaatt caacatcaaa tgaaggttaa
     2761 attatggacg acaaacaatt gcaggctcag gctgcgttca gcaaagcatc gcaaccggcg
     2821 atagatgctt cattaaattt aagattcagc ttcctcttca gccacccgta cgccaatctt
     2881 caacacttca ttatcttctt tctcggccac cgtccagatc atcccggcaa actctacctg
     2941 gtcaccgaca accggtgccg cgcctaacaa ctgctggaca atttcaccca gcgtttgctg
     3001 cttatcacga tattctcgcc cgtcttccag gccatatatc agcgcaacat cagcatattt
     3061 ggcgctggct tcgagaatga agttaccaaa gaagcgttga tccagcgcga ccggcggcga
     3121 ctggctgaac agtttaccga gcgccggaag atcgcgttcc cgaccaatta cacacaacac
     3181 atcgccttcg cgcagtcggg tgctgccggt aggatgaagc aactggttat cacgaaacag
     3241 tgccgcaata cgcgtctctt ttggcatatg caaatcgcgc agtgccgcgc ccacgcacca
     3301 tttatcggca ctcaattgat aaacaaactg ctcccacgga ttttccggat gaatatccag
     3361 gccaacgcgt gacaccggac gtcccactgg cggaaccacc actttggctt ttttagccgc
     3421 ccacgagagt gatgttccct gcaagagcag tgaaaccaga accacaaaga aggcgacatt
     3481 aaagaacaga cgtgcattct ccagccccgc catcatcggg aacacggcca ggatgattgg
     3541 caccgcgccg cgtaatccta cccagctgat aaacacgcgc tcacgcagat tgaaaccgcg
     3601 gaaggggagc aatccagcaa ataccgaaag gggacgggcg aagaatatca tccatgccga
     3661 caaaatgagc gccggaatgg caataggcag cagatcgctt gggttaacca atagccccag
     3721 caccaggaac atggcgattt gcgccagcca ggcgaggccg tcgaaatttt gcaggatgcc
     3781 gtagcggttg cgaatcggcc gattacccag cagaaaaccg cacagataaa cagccagaat
     3841 accgctgcct tccagcgccg tggttaaagc aaaaattaaa ataccgccgc ttaatgccag
     3901 caatggatat aatccggcag gcagggcgat gcgattaatc atttgcagca gtaaataacc
     3961 accgccaagt ccgatgacaa tcccgaggcc aaattgctgc agaatatcga ccacgaacat
     4021 ccaactgaca ctgctttcat gttgctggat catcgcaatc agggtaatcg tcagaaagac
     4081 cgccattgga tcattactgc cggattcaat ttccagcgtc gagccaacac gttcgttaag
     4141 ccccttacca cccagcagag aaaagaccgc tgcagcatcg gtagagccga cgatagcgcc
     4201 gattaataag ccttcaatca aatcaagatt aaacagccac gccgccatca tgccggttaa
     4261 accagaggtg ataagcacgc ccagcgtcgc cagcgacagt gccggtccta acgccacacg
     4321 aaaggaactg gcctgagtgc gcatcccgcc gtcgagcaaa ataatcgcca gtgccaggtt
     4381 acttaccatg taggcgaagg ggtaattatc aaacgggata ccgccgacgc catcgactcc
     4441 tgccagcatg ccgatcgcca gaaaaataac cagaatagga atgccaagac gggaagaaaa
     4501 tgaactaagt aatatactgc tggtgacaag gatggatcct aagatgaaaa ggctaattat
     4561 tgttgtggca tccaacggtc ggttactcct gattacgctg tctcttatat aaaccctacc
     4621 atattagcgg cagagacagc gttttactta gccctgaagc gtgatttttt tacattttaa
     4681 gaacaggatg accgctaatc gtcaactgag tgccttcccg ggtgttattc agaatggcat
     4741 gtgcgcccaa cggcagcgta accgtgcgtt gttcatgacc aaaatcgagg ccggtaatga
     4801 gtggaatcga caggcgggaa cgcaaaaacg cgtacactga ctccaggttg taacctgcgt
     4861 cataatcatt gggcgtgctg ccgctaaagc taccgagaat aatcgccttc tgacgtggca
     4921 aaattcccgc atgatagagc tgcaacagca tacgttcgac gcggaaaggg tgctcgttaa
     4981 tatcttccag taccaggata ccgttctcaa tttttggcat ccacggtgta ccaatcagtg
     5041 aaatcagcat cgcaagattg cctccccaca acgtgccttc ggtctgacat gtcgggcctt
     5101 ccccttgcca ttcaatggtg aaggttttat tgcgtaacgc cagccagaaa tggtgctcgg
     5161 taaaggcgtt cagttcatcc gcaccaaagt ttgctaccag catggggccg ctaaaggtga
     5221 tgacattgcc ttgcgccaga agaccgcact gaatggcggt aaaatcgcta tgtccgcaaa
     5281 tgagtaacgg gtcatgttgt tggcgagcca ccagtgcctg ccagtcaata tctgccagta
     5341 aacgactggc accgtaaccg ccgcgtacag ccagcacgat ggtgttgggg gtagtcagtc
     5401 tggcaaggga attgagatct tccaggcgct ccgtttccgt acccgcaaaa cgctcacaac
     5461 gacgggcaat aacctcgacg ttattgacct gatgcccctc gtcggtaagg cgatggatac
     5521 cacgcagcgc ggcgtgctgt ttaatgcagt aacccgatgg ggcaattaag tgaaacagag
     5581 acatggcaat tccttgctga caacagaaac gaaatgtata tcatgccgct taggtgtgcc
     5641 gttgtcacct caacggcgat tccaggctat aaggatagaa gaagtgaaat tgagatggtt
     5701 tgcctttttg attgtgttat tagcgggttg ttcatcaaag catgactata cgaacccgcc
     5761 gtggaacgcg aaagttccgg tgcaacgtgc gatgcagtgg atgccaataa gccagaaagc
     5821 cggtgcagcc tggggcgtcg atccacaatt gatcacggcg attatcgcta tcgaatcggg
     5881 tggtaatccg aacgcggtga gtaaatcgaa tgccattggt ttgatgcagt taaaagcttc
     5941 aacctccgga cgtgatgttt atcgccgtat gggctggagt ggtgagccga cgaccagcga
     6001 gctgaaaaat ccagagcgta atatttcaat gggggcggct tacctgaata ttctggaaac
     6061 cggcccgctg gcaggcattg aagatccgaa ggtactgcaa tatgcgctgg tggtgtcata
     6121 cgctaacggg gcaggtgcgc tgctacggac tttctcgtca gatcggaaaa aggcgatcag
     6181 caaaatcaac gatttggatg ctgacgagtt cctcgatcac gtagcgcgaa atcatcctgc
     6241 gccgcaggct ccgcgctata tctacaaact tgagcaggca ctggacgcga tgtaaatcag
     6301 tcgcgtactt tgtccgcttt ctcccgggct tcccgctcga gagagaaaat aatccgttgt
     6361 aattgccgct ccaccgtcgg gctgacgtta agaaaacgga agctcagacg gggagtggtg
     6421 atggtttcat tcttgccatc aatcactttg cgctcgctga tggagattaa ctgggcgtca
     6481 aagtgaaaaa caccccattg ccccatgttg acttcaatct gagcgaagcg catgccttct
     6541 tgtaattcgg caggctttgc tgtttccagt aatgcgccca tgccgcctaa cgacaaatca
     6601 tacaggcgga aacgtaacgt actgttatcc gccagtttgg tctggcaaaa ataaggcgga
     6661 tggagtgggg cggagatgcg gaaatatcgg cgtcgttgta caaaccataa ggtgggaggc
     6721 ggtacggtaa taaatgccgg aagctgcaag tattcactct gctgtagttg ttcaacagta
     6781 aactcgactt tcgcaccctg agtttcggcg gtaatggtaa tgtgctgcgc ctttagcacg
     6841 gcgatgttgt cttcggcttg actgccgaaa tccagcacca gtttatccgg ggttattgcc
     6901 agtattttgc tgatcagctg cccgccattc caactgagcc gcaaaggaat tgcggctttg
     6961 tgcaaatcgc gtaacacgcc caggacggct aacggatttt gtttcaggaa ctgctcatgg
     7021 taatgactca cgcggaaaaa ctcctgactg acaaactgtc tttggtttat cggtcacagt
     7081 taacaaaact taatacaaat gtgtgaatat tttttacatg ctgttcttaa atcagccgac
     7141 atacgcccag catcgatccc gcccttgcct atacttagag cgttgatgta agcatttctt
     7201 gcgtccgatt catcgaaacg agggcctgaa catgggaatt attgcctgga ttatttttgg
     7261 cctgatagcc ggcattatcg ccaagctaat catgccgggg cgtgatggtg gtggattttt
     7321 cctgacctgt attctcggga tagtcggtgc ggtggtcggc ggctggctgg cgaccatgtt
     7381 tggcattggc ggctccatca gtggttttaa tctgcacagc ttcctggtgg cggtggtggg
     7441 agctattctc gttctgggca tattccgcct cctgcgaaga gaataagatt ttcataaggc
     7501 ggatagcgat acagatgccg ctatccgctt tcacatcaga acgtatactc gacacctgct
     7561 ttacgggtga aaaaaatcaa tatagcactt cgatatccga taaagtcggt tcccggtaac
     7621 aacaacagaa tcctttttta attattgttt cgttgttttt ggtgtgattc agaaaataaa
     7681 tattttagac agtagccagt caggcgttaa aaatggggcg gatagtgagg cggttttggc
     7741 tgcgcttatt gaacatttag aattgatcaa tccttctggc agattaagcc aaaatacccg
     7801 ttcggcaatg cttcagttac gcgaagagga atggtctgaa ttcttttttt ggttgctaaa
     7861 ttctctggag tgtctggatt atgtgattat taatttaact ccagaaagca aaaaaacgtt
     7921 gatgagtgaa caccgtaaca atattcaggt agcaattgat gctttatata gccaacgtcg
     7981 gcgtaaatcg ccgggtgatg aaagtgaaac acttacccgt agaaatgacg ctatcttcgg
     8041 caaccacgta tggcaaacat ttgcgcaata cttcccgcca ggacttgaaa aaccgtctgt
     8101 gtagaaaaaa ccatagctat ggtgttatct gccgacaacg ccatccggag aagccgaatg
     8161 acgttgtcgg agtaagcgct ggttaaggtg tgggttgtgc ctctttggtt gagggttgcg
     8221 tcgttgctga cttaacggtc ggacgcgtcg ccggaacatt gtcacacggt tgctctttcg
     8281 ggcagatcaa atccagcatt ttcagcgtca cgccattggt ccagccaaag ccatcctgta
     8341 atggatattc gccaccgccg ccccccgttc cggtggtgct gacatcatat ttttccacca
     8401 gctttttctc ccggtcatag gtgtgctgaa cattggtcag gaagtgccag ctaatgtcca
     8461 tcgccacctc tttttgcccg tagttttgta atccttctgt cgcgacccac tgtaacggtg
     8521 cccagccatt tggcgcatcc cattgttgcc cacttttcac cgacgtggtg ttcaggcccc
     8581 gggttgcagc agatgtgttt tcgtcgccgt cgccattttg ttggcgcgat ctttcgctgc
     8641 cgcattgacg tacagcggga acagggcggc cgcggttaac tgattgcgca ctttatgact
     8701 tttcaggtcg taatcggcat accagccttg ttgatcgttc cacatgtatt tttcgatccc
     8761 tttttgacgg gcatttgcca gcgtttcgta ctggtttgcc atcgcgttat ctccggcagc
     8821 tttgctggcg cgggcgagga ttttttccat tttaaacatc aggctgttca gatcgaccgg
     8881 tacgatgctg gtggtgcgta aggtatttag ttgatgcggg ttgtccatcc agcgcgagct
     8941 gaaatcccag ccagacgcag cggcagagcg caggtcgcgg taaatttcag tggcaggtcg
     9001 attcggattg cttttggcgg tggcaatatc ttccacccat gactctggtc gtggcgtatc
     9061 gcgatcgtcc cagtagcggt tgagaagggt accatcctga agttttacaa cgcgtttttc
     9121 ctgttgtccg gcttacaggt tttcaacacc gtccatccag taagcatatt ctttttgcat
     9181 ttgcggcagg tattgcttca acgcggcatc gccttcatgc tgcgccagta actctaccat
     9241 cagggcaaag aagggcggtt gcgagcggct taaatagtaa ctgcggttgc cgttgggaat
     9301 atgaccgtaa gtgtctattt catgagcaaa attggccacc atatccgcga ctttatccca
     9361 gtgaccgctt tcggcaagtc ctaacatggt gaagtaactg tcccagtaat atacctcgcg
     9421 aaaacgtccg cccggcacga cataaggttc cggcagcggt aacagagaat cccatttttc
     9481 ggtgttttcg gtagaacgcg ttaataccgg ccaaagtccg tcaatatgtt cgcgcagtga
     9541 ctgcccctct ggcggaacat atttctcgcc ctctttcggc agggtgaaat tgacgttaac
     9601 gaaatggagc agatcaaatc cgctctggtt ttgctgcatc cgataatcag caaggatcat
     9661 cagcggatcg ctgttcggca cggcatcggc aaaggttttt tggtccggaa aaagtttggc
     9721 gttttgcaca tcattaaaca gcggccctaa taaaatatca ggcggctgtg gtgttaccgg
     9781 tgtttcttct gcctgcaccg atagcgcagc gaaacacaaa aagatacagg ctggaattaa
     9841 cgccattttt tgcgggcgag aaggtgcggg ggatttcatc aatcattctc ctttggcgaa
     9901 accgaataaa acggtattca agtatcagaa aaccttagtt caggatcgca ctagctgcat
     9961 gatcgaaatc tcattctgcg aactgtcagg cattttagaa aagggaatta aagggataaa
    10021 taacggtgaa atagagtgat caaataacgt ctgtttatta gccagtcagc gacgttgggt
    10081 tcgtgattag cgaagaaaaa tcatcataaa ttggtgaaaa atataacagg tagttaaaaa
    10141 ccattagtgc tgagtaaatt gccggatgac atcagaacga tgccatccga acagtggctt
    10201 aaccctgacg gttgaaacgt tgccttttaa cgtccagcgt tagcgtttct tctggttgta
    10261 tcgcatacag tttctcaccc tgctggcaaa tccagccaat ccccagttca cgggcgatta
    10321 gggcgctgtg ggataccgga cttccggcgc taaggcagat accttttaca accgccggat
    10381 ccagttgcag tactgtggaa ggataaatgt tctccgccag tagaatagtt ggcgagttaa
    10441 actgcgggag ttcttctttc gtttgggtca ggtggaccag ggtgcgatgc agaagatcgt
    10501 ccacatcaat atagcgagct tgtagatatt catcatccag ttgctggtat tgctggctaa
    10561 gttctttaag aacttgctgc caggcatatt ctgccgtgca atgttcatgc tgaaggagtt
    10621 cgcttgccgc cgccagcagt tccggatcat ctaacagtgt atggtgacca gaaaagattg
    10681 cggcaatatc gtcaagcccg ctggcttctg ctttcgctgt taacgtcatc agatctaata
    10741 acgtgaagtc aatggcctgg cgtaatcgtt cttgttcctc ttccacggtc agggttgatt
    10801 ttgcctgtac cgtacataaa accggttgat aataaaaggc tttacccgaa acaggcggaa
    10861 cgggacgcag agtaggtgga acaacttcct ccgtttcacc aaagttatct tcagccagct
    10921 gacggaaagc gatcagtgcc tcttcagctt ctggcccttt cgcaatcagg cgcagcgtat
    10981 cgttatagcg aacttgtagt aacgcaatct ggttaatact ctctggtgtg acgcatttgc
    11041 cgtttttttc cagcaacata tcggcattaa atgtcgataa ggtataaacc agccgggagg
    11101 ccggacgtac atgcaggccg ttacggtttt ttatgaccac cgccagagaa cgggcttctt
    11161 catcgtacgc aggacatgtg tcagagattt tagtgtcgga ggacggtaaa cccagttgtt
    11221 cacgtttggc ttccagcgca tgcatagcgt caaagataac tttgtcgata tccgctcccg
    11281 aggccgcgct gaccgttgct gccagtgtac cttcgaccaa cggcgcagca cacaaacgta
    11341 cttttgcggc gatcttggga gccagcaatt ccagcgcagt ttcagcactc aataatgcgc
    11401 tacccatatc catcatgacc agcacatggt cggcatcagc aacagattcg atggcctcca
    11461 tcactttgac ggcatcggta ccaataggat tttgtggatc gtcaattccc gcggcaatgg
    11521 cgattttaca actatcactc attaacatct gacgggctaa ttcaccgaca ccttctccca
    11581 gtcggctgct atgtgaaact atgaccaggt ttaccatcac caattcctta ctcttttgcg
    11641 gctaacgcca acatttgcat cataaacatc accgaggtcg cgccgggatc ctggtgacca
    11701 atactgcgtt caccgagata actggcgcgg cctttgcggg cttgcatcgt aatcgtactt
    11761 tgtgcagcgg attcggcgat tctactggca gcttcgagcg ccaccggaac agagagattt
    11821 tgctcgctgg actgacgtaa cgattccacc accggcaccc acacatcaca catggtttta
    11881 tcgccaggtt cggctttccc gcgactgatt acgccgtcca cgccatcgcg gaacatctga
    11941 taaagctctt ccagtgtcag gctttgccgt gcctgggtcg cctgtgcggc gcggataaag
    12001 aaggtaccga acagcggacc actggcacca ccgacgctgg aaagcagcgt cataccggta
    12061 ttcttgagaa tgaaaccgat atctttatct gcgatagcag ggagtttttc caccactttg
    12121 ctaaagcctc ggttcatatt tagcccgtgg tcagcgtcgc caatttcgcg atccagtccg
    12181 gtaagatact cgctctcggt gctgaaaata tcgccacaac gagtgagcca gttaacaatt
    12241 tgagttctgc tcagtgacat tgctttctcc ttatttaccc cagttaaggg ccggggtgtg
    12301 gaccggggcg tcccagagtg ccagcgtttc gtcatcaact ttcagtaagg tgattgagaa
    12361 accggtcata tccagtgagg tgcagtacgc gccaattaaa ttacgttcga tagtcaatcc
    12421 cgcttgctgg caacgtgtgg tcaggcggtt atagacgccg tacagctcag aaagcggagt
    12481 tgcgccaaga ttgttaacca gcgcaatcac ccgatcgcca gactggagcg gttgtttggt
    12541 ttgttgttct tcctgccaac tgccttgttg ataatcccag aaacgcaaag tgcgatggta
    12601 tgagccattt tccagcaggg tgtcgaacat ttcatcgacg gtttgatcaa gggaagagaa
    12661 ggagcggcgg tcaatacccg gctcaccatg aatgccgacg ccaaactcca tctcattatc
    12721 cgccagggta aaagaaggtt tgcccgcggc aggaacggta caggcaccga gagcgatacc
    12781 tattgagtgg ccttgattat tcaacttacg ccccagttcc gcacaggcgt ccagtgagtc
    12841 gccacgctcc gccgctgcgc ctacgagttt ttcaattaat acggtgttgg caacgccgcg
    12901 tcgcccggcg gtataaagac tgtcttttac cgcaacgtcg tcatcaatga ccacagtggt
    12961 cacttttacg ccgctatcgt gcagtaactc ggtcgctgtt tcaaagttaa gaatatcgcc
    13021 ggtgtaattt ttgataatca acagtacacc ttcgccgcca tcaatttgca tggagcattc
    13081 aaagatttta tcgggcgtcg gtgaggtgaa aatttcgccc ggacaggccc ccgaaagcat
    13141 cccctgaccg atataaccac agtgcatcgg ctcgtgtccg ctgccgccac ccgacagcag
    13201 ggcgactttt cctgcaacag gggcatcagc tcgggtgaca tacaccggat cctgatgcag
    13261 tgtcagcgat ggatgcgctt tcgccagtcc tgccagttgt tcgtccagta cgtcttgcac
    13321 atcattgatc aattttttca ttattttgct ccagcaatta cggtagggca tggatgatgt
    13381 tcaacgacac ggcgaccact gactgccgat gaatccattg tgcatcaggc aagggaaaag
    13441 aaaattagcc caaattatgt ttcatagtga aacatatgct ttaatgaatg ttccatattg
    13501 aaacttttac gtgtattaat acttaaaatt gcgagccgga acaccttttg tcataaggga
    13561 tgcgggatat gagtggcgct tttaacaacg atggtcgggg catatctccc ttaattgcaa
    13621 cctcctggga gcgatgcaat aagctgatga aacgggagac atggaacgta ccacatcagg
    13681 cccagggcgt gacatttgct tctatttatc ggcgtaagaa agcgatgctg acgctcgggc
    13741 aggctgcgct ggaagatgcc tgggaatata tggcaccgcg agagtgtgcg ctgtttatcc
    13801 tcgatgaaac cgcctgcatt ctcagccgta atggcgatcc gcaaaccttg cagcagctaa
    13861 gtgcactggg attcaatgac ggcacgtatt gcgccgaggg aattattggt acttgtgcgc
    13921 tatcgttagc ggctatctct ggtcaggccg tgaaaacgat ggccgatcaa catttcaaac
    13981 aggcactctg gaactgggcc ttttgtgcaa cgccgttgtt tgacagcaag ggccgattga
    14041 cgggaacaat agcgctggcg tgtccggttg agcaaactac cgcagctgat ttgccgttga
    14101 cgttggcaat cgcccgcgag gtcggaaatt tactgctgac ggacagtttg ctcgctgaaa
    14161 ctaaccgtca tttaaatcaa cttaatgccc tgttagaaag tatggatgat ggcgtgatta
    14221 gctgggacga gcagggtaat ttgcaattta ttaatgccca ggcggcgcgg gtcttgcgcc
    14281 ttgacgcgac ggcaagtcag ggaagggcaa tcactgaact cttaacgtta cccgccgtat
    14341 tgcaacaagc aataaaacag gcacatccgc tcaaacacgt agaagcaacc tttgaaagtc
    14401 agcatcagtt tattgatgcg gtgataaccc ttaaaccgat aatagaaacg cagggaacca
    14461 gctttatttt gttgctccat cctgtggaac agatgcggca gttgatgacc agtcaattag
    14521 gaaaagtcag ccataccttc gctcatatgc cacaggacga tccgcaaacc cgccgcttga
    14581 ttcattttgg tcgccaggcg gcgcgcagta gctttcctgt cctgctttgt ggagaagagg
    14641 gcgtgggaaa ggcactgcta agtcaggcaa ttcataatga aagcgagcgt gctgcaggtc
    14701 cttatatcgc cgtcaattgt gagttatatg gtgatgcggc gctggcggaa gaatttattg
    14761 gtggcgatcg cacggacaat gaaaatggcc gtctgagtcg gctggaactg gcacacggcg
    14821 gcacgctgtt tcttgaaaag attgaatatc tggcggtgga gttacagtct gctttgcttc
    14881 aggttatcaa gcagggtgtt atcacgcgac tggatgcgcg gcgtttaata ccagttgatg
    14941 tcaaagtgat tgccacaacg accgcggacc tcgcaatgct ggtggaacaa aatcgtttta
    15001 gtcgccagct gtattacgcg ttgcatgcat ttgaaattac catcccgcct ctgcgtatgc
    15061 ggcgtggcag cattccggcg ctggtgaata acaaattacg cagtcttgaa aaacgcttct
    15121 ctacgcggct gaaaattgat gacgatgccc tcgctcgcct ggtttcctgt gcatggcctg
    15181 gcaacgattt tgaactttac agcgtcatcg agaatcttgc tctgagtagt gataatgggc
    15241 gcattcgcgt cagtgatttg ccggaacatc tgtttaccga gcaggcaaca gatgatgtca
    15301 gcgccacacg cctttccacc agtctgtcat ttgcggaagt tgaaaaagag gcaattatta
    15361 acgcagccca ggtcacaggc ggtcgcattc aggaaatgtc ggctttactt gggatcggcc
    15421 gcactacgct gtggcggaaa atgaagcaac atggcattga tgcagggcag tttaagcgcc
    15481 gggtatgaaa gacagagacg atttctgata catcagagtg atctatattt cattccggcg
    15541 cacgctaaca tttttcagca tcgtttaagg gctggtctat cccgcactta aaagctgaag
    15601 cgatatcctc cgttgacttg cttctgatca aagaggttac tctgcgtgta atccgcttcg
    15661 aggtagaatg tgtgctgttt gttatactgt gcactgactc ccacgccgtt attccagcca
    15721 ttacctttga aactgtactt ctcccgggag ttgttcaaca gatagtctgt atcccctgaa
    15781 aactcgcgga tagctccagt cttcacatac atattcagct ggctgttgcc tgcggtgatg
    15841 tcatatccca gtatcatgct ggcacgcccc agcagcgatt cgtagtgatt cagatgtata
    15901 ttgagaccat tactcgcctt catagccatc tcattctggt ggctgtatgt gagctgggtt
    15961 tgcggctcta tatagaaccc ataaccagta ggggtcaggt tgaacctctg cccggcttcc
    16021 agggagatgc tcaatccatt cgcagtgccg ttggcgttaa cgccgttgtt ctgactgtcc
    16081 agtacgtgaa aactattttt ctggcgcgat gcttttacaa cgagatcgct gtaaaaaccg
    16141 ttgtgtgcca tgtaactggc atacattccc atgtagtctg aacgtgcggt accgtcgcct
    16201 ccgctatagt ccggcgatgc atgtgttgag ccaatataca gaccgacata caacggcatt
    16261 acatcagaga gacgtttatc cccaccaaac tggataccgc tgtaacccat gtcaaagccg
    16321 ctcagtttgc cactggcgaa ggagtccagg cttcccccat aactgcgcag ccagatatta
    16381 ccgtctttac tctgatttcg caggtcaccc attcgttgca tcagcgtacg gttttcaaca
    16441 tagtttaata agtaaccgac attgagataa ttgccgccag catctgcggt cgtggtgggt
    16501 ttaggtgtgg gagtggggtt aggcgtagga tcgggttcag gcgtaggatc ggggttgact
    16561 atgggaggct gagcgggagc tggtgtgggt tcaggattag gagtcggttc cggaactgtc
    16621 ccggaagcgt aaagctccca gttagtgcca tttttacgca catcgtacag atatcccccc
    16681 aactcaacct gagaagacgc gctgaacgag gccgcgccgt cagtggtttt taccactgtc
    16741 agaacttcat ttcccgttgt ggcctcgctg ccctggttgc ggatagccaa tacgtgatta
    16801 ccagcactac tcccgctgat attcaataaa tcccctttat tattaacgcc attaccctcg
    16861 ccaacaacat cagcacgcat aataaaggta ctgttaccgc tcaggttctc tacgtttaat
    16921 gtggcaaatg tgccggcagt tgacccgtgg ctggcaaaat cgacagttga atggctcagc
    16981 gccagcgtgt cgagattaga attacttgtt acgttccaga cgctgttatt cattgcaacg
    17041 tccagttttc cgccattgac attatcgctg agggaggaac ctgtccaaac cgacccaggg
    17101 tgcatatcca gattgattag cccacctttg gaaagaacgc taccgttgat aagcatacga
    17161 cccgaggcgt tgatgcggct ggcggcataa ccatcgtcat gttgcgttgc aatggccatc
    17221 tggtcgggtg tactcatatc aatgaccaga tcgctcgtga ggtcgatctg gctgttggtc
    17281 atggcataaa ttcccctggc tcctgccgcg ccggtgatag ccaaactgtc tccggttatt
    17341 ctaccgccgc tgagcgccca caaacccagc gccagactgc cattacgatc aactgtaata
    17401 tcggtatttt gcatgttgac aacagccgtt gccgtctggg ccgaggcacc ataagaaccg
    17461 ccggaaaaga tgctgtttcg ttgcgccgcc gtgccagaaa aattgattgt cgcgtctgaa
    17521 ccactggtga cgaggccacc gccctgcgcg gaagaaatat ggctatctgc accgatagtg
    17581 gttgtaccac cacgaacttc gacgccattg gccgcggctc cagttacatc aacagtgagt
    17641 gcattcgcgc taacctggcc aaagctccag aggccgtgtg cattatcgcc attggtttta
    17701 atggaactgt ttgttccgag atcgacaaca gagtttttct gtacgtttat ccccatggcg
    17761 ctgtagccct gaacatcgat tgtcaggtct gtagccgtaa aacgcgcagc accattggcg
    17821 ttattgccgt tgagaccacc gatataaaca cctgtacttc catcggtcgt gattttactt
    17881 ccgcttccaa gatcgacact ggtgccatag tcattgatgg ttaggcctat accgttcgag
    17941 ttttcaatgg tgaattgagt ggctgttagt gttgagctat gcccaataat gatgccgtca
    18001 tcgttactct taatggtgct gcctgtgcct aagtcagcat gggtatagtc accaattaag
    18061 ttaatgccga tggcagaggt ttgaccaaca acatctactg tgagtcggtt agctgtcagg
    18121 gagctgtttt tgccctgaat aatgattcct tttgcatatc cagaggcgtc gttgacattg
    18181 acggtgacat cattacccag gttgatattg ccaggcgtgt ttcctgctgg ggtcattaca
    18241 ccatagaggt ttcctgatgg atcggcggta tctcctgtaa ttctgtcacc atcattaata
    18301 gtaatattgg tgccatattg acttcctgta tcagcagcta tcagcagggg ggaaaagata
    18361 attgcattca aaccaatagc gccaaatttt atcagttgaa ttgagggcga acggattttt
    18421 aattcagcga gacgatctgc tttggtattc ccattgtgtt gtttgatgcc cataccactc
    18481 ctatatagta cccagactat gggtctatgg attttgtcat tttgtttaaa tcaatgaata
    18541 atatcctc
//
LOCUS       DAPGWB010000086        18503 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.086, whole genome shotgun sequence.
ACCESSION   DAPGWB010000086 DAPGWB010000000
VERSION     DAPGWB010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18503
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.086"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            81..1301
                     /locus_tag="RHX79_002856"
     CDS             81..1301
                     /locus_tag="RHX79_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HDV2198008.1"
                     /translation="MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLML
                     HLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNS
                     LSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA
                     AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTW
                     YANHQSLCNPLYNLMYQAGVPLRHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVS
                     GVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKTAEHYRNKIAIYLHW
                     YQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKAKNYQRYNERI
                     KGKRQEWGILCNND"
     gene            1274..1903
                     /locus_tag="RHX79_002857"
     CDS             1274..1903
                     /locus_tag="RHX79_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB-like nuclease domain-containing protein"
                     /protein_id="HDV2198009.1"
                     /translation="MGDTMQQRLTQDLTQFLASLPEDDRINAINEIRMAIHQVSPFRE
                     EPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLKKSIEIDGFTQPIVVTHTDKNALEIV
                     DGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIV
                     RELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK"
     gene            complement(1904..3064)
                     /gene="ybdL"
                     /locus_tag="RHX79_002858"
     CDS             complement(1904..3064)
                     /gene="ybdL"
                     /locus_tag="RHX79_002858"
                     /EC_number="2.6.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-oxo-acid transaminase"
                     /protein_id="HDV2198010.1"
                     /translation="MTNNPLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDG
                     PRYLQERLAYHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATE
                     ALYAAITALVRNGDEVICFDPSYDSYSPAIALSGGIVKRMALQPPHFRVDWQEFAALL
                     SERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASV
                     LAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLA
                     LADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDD
                     VEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL"
     gene            3173..4261
                     /gene="hcxA"
                     /locus_tag="RHX79_002859"
     CDS             3173..4261
                     /gene="hcxA"
                     /locus_tag="RHX79_002859"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxycarboxylate dehydrogenase HcxA"
                     /protein_id="HDV2198011.1"
                     /translation="MPHNPIRVVVGPANYFSHPGSFNHLHDFFTDEQLSRAVWIYGKR
                     AIAAAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTA
                     KALARRLGLPFVAAPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIIL
                     NAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALS
                     DQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGT
                     KVAYGILVQSALLSQDDVLAQLTGAYQRFHLPTTLAELEVDINNHAEIDKVITHTLRP
                     VESIHYLPVTLTPDTLRAAFEKVESFKA"
     gene            complement(4271..4468)
                     /locus_tag="RHX79_002860"
     CDS             complement(4271..4468)
                     /locus_tag="RHX79_002860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HDV2198012.1"
                     /translation="MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTY
                     EEFFRERQDARYGGKGGARCC"
     gene            complement(4650..6755)
                     /gene="cstA"
                     /locus_tag="RHX79_002861"
     CDS             complement(4650..6755)
                     /gene="cstA"
                     /locus_tag="RHX79_002861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein CstA"
                     /protein_id="HDV2198013.1"
                     /translation="MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCI
                     YLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG
                     VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYLRYLRPGRI
                     GEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLL
                     APRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIA
                     CGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFA
                     MNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL
                     AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPG
                     LKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLC
                     AVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKVGFLAIANKFQAMIDSG
                     NIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETP
                     YEPMPENVEEIVAQAKGAH"
     gene            complement(6936..7349)
                     /gene="entH"
                     /locus_tag="RHX79_002862"
     CDS             complement(6936..7349)
                     /gene="entH"
                     /locus_tag="RHX79_002862"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proofreading thioesterase EntH"
                     /protein_id="HDV2198014.1"
                     /translation="MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDT
                     RTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVC
                     QPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG"
     gene            complement(7352..8098)
                     /gene="entA"
                     /locus_tag="RHX79_002863"
     CDS             complement(7352..8098)
                     /gene="entA"
                     /locus_tag="RHX79_002863"
                     /EC_number="1.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
                     EntA"
                     /protein_id="HDV2198015.1"
                     /translation="MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY
                     PFATEVMDVADAGQVAQVCQRLLAETERLDVLINAAGILRMGATDQLSKEDWQQTFAV
                     NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL
                     ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEI
                     ANTILFLASDLASHITLQDIVVDGGSTLGA"
     gene            complement(8098..8955)
                     /gene="entB"
                     /locus_tag="RHX79_002864"
     CDS             complement(8098..8955)
                     /gene="entB"
                     /locus_tag="RHX79_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin biosynthesis bifunctional
                     isochorismatase/aryl carrier protein EntB"
                     /protein_id="HDV2198016.1"
                     /translation="MAIPKLQAYALPESHDIPQNKVDWAFEPQRAALLIHDMQDYFVS
                     FWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRS
                     PEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTT
                     ATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPVPASKAAL
                     REVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAW
                     WKLLSREVK"
     gene            complement(8969..10579)
                     /gene="entE"
                     /locus_tag="RHX79_002865"
     CDS             complement(8969..10579)
                     /gene="entE"
                     /locus_tag="RHX79_002865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2,3-dihydroxybenzoyl)adenylate synthase EntE"
                     /protein_id="HDV2198017.1"
                     /translation="MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVID
                     GERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVL
                     ALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLHNDSGE
                     HNLQDAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC
                     QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVT
                     ALVPPAVSLWLQALTEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGM
                     AEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFR
                     GYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENL
                     LLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVE
                     CVDSLPLTAVGKVDKKQLRQWLASRASA"
     gene            complement(10589..11764)
                     /gene="entC"
                     /locus_tag="RHX79_002866"
     CDS             complement(10589..11764)
                     /gene="entC"
                     /locus_tag="RHX79_002866"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase EntC"
                     /protein_id="HDV2198018.1"
                     /translation="MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAV
                     NGDSPDSPFQQKLAALFADAKAQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEK
                     QTSARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA
                     AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARR
                     QPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWH
                     LATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWC
                     DSEGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGLH"
     gene            12139..13095
                     /gene="fepB"
                     /locus_tag="RHX79_002867"
     CDS             12139..13095
                     /gene="fepB"
                     /locus_tag="RHX79_002867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-enterobactin ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV2198019.1"
                     /translation="MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLES
                     QPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLY
                     IGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG
                     EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQM
                     LEQLGFTLAKLPAGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIY
                     ANPLLAHLPAVQNKQVYALGTETFRLDYYSATQVLERLKALF"
     gene            complement(13099..14349)
                     /gene="entS"
                     /locus_tag="RHX79_002868"
     CDS             complement(13099..14349)
                     /gene="entS"
                     /locus_tag="RHX79_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin transporter EntS"
                     /protein_id="HDV2198020.1"
                     /translation="MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI
                     QMMTHSTWQVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN
                     ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV
                     ISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFR
                     FLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAQIGFLYAAIPLGAAIGAL
                     TSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYT
                     MLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGV
                     LLLLVLVELRRFRQTPPQVTASDS"
     gene            14460..15464
                     /gene="fepD"
                     /locus_tag="RHX79_002869"
     CDS             14460..15464
                     /gene="fepD"
                     /locus_tag="RHX79_002869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-siderophore ABC transporter permease"
                     /protein_id="HDV2198021.1"
                     /translation="MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAL
                     SGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGAS
                     FAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
                     VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALN
                     SLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGA
                     DHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA
                     "
     gene            15461..16453
                     /gene="fepG"
                     /locus_tag="RHX79_002870"
     CDS             15461..16453
                     /gene="fepG"
                     /locus_tag="RHX79_002870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter permease"
                     /protein_id="HDV2198022.1"
                     /translation="MIYVSRRLLITCLLLISACVVAGIWGLRSGAVTLETSQVFAALM
                     GDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWS
                     GVLVAMVLFGQDLTAIALAAMAGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA
                     FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIMLMLIAAALLVRRMRLLE
                     MGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARW
                     GLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK"
     gene            16450..17265
                     /gene="fepC"
                     /locus_tag="RHX79_002871"
     CDS             16450..17265
                     /gene="fepC"
                     /locus_tag="RHX79_002871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter ATP-binding
                     protein"
                     /protein_id="HDV2198023.1"
                     /translation="MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGC
                     GKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELV
                     ARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ
                     ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALR
                     EGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGTPLVVPLGRTAPSTANS"
     gene            complement(17262..18395)
                     /gene="fepE"
                     /locus_tag="RHX79_002872"
     CDS             complement(17262..18395)
                     /gene="fepE"
                     /locus_tag="RHX79_002872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen length regulator"
                     /protein_id="HDV2198024.1"
                     /translation="MSSLNIKQGSDAHFPEYPLASPSNNEIDLLNLIAVLWRAKKTVM
                     AVIFAFACAGLLISFILPQKWTSAAVVTPPEPVQWQELEKTFTKLRVLDLDIKIDRTE
                     AFNLFIKKFQSVSLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNAS
                     KKKDEPSLYTSWTLSFTAPTSEEAQTVLSGYIDYISALVVKESLENVRNKLEIKTQFE
                     KEKLAQDRIKTKNQLDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGAD
                     GIERKLEIEKAVTDVAELNGELRNRQYLVEQLTKANINDVNFTPFKYQLSPSLPVKKD
                     GPGKAIIVILSALIGGMVACGSVLLRYAMASRKQDAMMADHLV"
BASE COUNT         4336 a         5246 c         4784 g         4137 t
ORIGIN      
        1 actctgcttt acagtgttta ctttataatt aacagtctta tctcactgtt caccctgtaa
       61 cgttcagaga gcgtcttcag atgtctattt ataaaattcc tcttccgctc aatattctgg
      121 aagctgcacg agagcgtatt acctggacac tcaacaccct accccgcgtt tgtgtctcat
      181 tttctggcgg caaagactct ggtttaatgc tgcatctgac agccgaactt gcccgacaaa
      241 tgggcaaaaa aatctgcgtt ttgtttatcg actgggaggc gcaattctct tgcaccatta
      301 actatgttca gtccctgcgc gagttgtaca ccgatgtcat cgaagagttt tactgggttg
      361 cgctcccgct tacgacgcaa aattcccttt cacaatacca acccgaatgg cagtgctggg
      421 aacctgatgt cgaatgggtg cgtcagcccc cgcaagatgc gataaccgat cctgactttt
      481 tctgctttta ccagccaggc atgaccttcg aacaatttgt acgtgagttt gccgaatggt
      541 tttcacaaaa acgtccggcg gcgatgatga tcggcatccg tgcggatgag tcctacaacc
      601 gttttgtcgc catcgccagt ttaaataaac aacgttttgc cgacgataaa ccctggacta
      661 cggccgcacc aggcggtcat agctggtaca tttaccccat ttacgactgg aaagtggctg
      721 atatctggac ctggtatgca aatcatcaaa gtctctgcaa cccactgtat aacctaatgt
      781 atcaggcagg cgttcctctg cgtcatatgc gaatttgcga accttttggc ccggagcaac
      841 gacaaggatt atggctctat cacgttatcg aaccggatcg ctgggctgct atgtgcgcac
      901 gagtcagcgg ggtaaaaagt ggcggcattt acgccggaca tgacaatcat ttctatgggc
      961 atcggaaaat cctcaagcca gaacatttag actggcaaga atatgcatta ttgctgctca
     1021 atagcatgcc ggaaaaaaca gctgagcatt accgcaataa aatcgccatt tatttgcact
     1081 ggtatcagaa aaaaggcatc gaggttccac aaacccagca aggggacatt ggcgcgaaag
     1141 atatcccctc ctggcggcgg atatgcaaag ttttactcaa taacgattac tggtgtcggg
     1201 cattatcatt tagtcctacg aaagcgaaga actatcagcg ttataacgaa cggataaaag
     1261 gaaaacgtca ggaatggggg atactatgca acaacgatta acgcaggatt taacgcaatt
     1321 tctcgccagc ttgccggaag atgatcgcat caacgcgatt aatgaaatcc gcatggcgat
     1381 ccatcaggtt agcccctttc gtgaagagcc agtggattgc gttctgtggg ttaaaaacag
     1441 ccaacttatg cctaatgatt acaacccaaa caacgtggca ccacccgaaa aaaaactgct
     1501 gaaaaaatcc attgaaatag atggttttac ccaacccatt gtggtcacgc atacggataa
     1561 aaatgccctg gaaatcgtgg atggttttca ccgccatgaa attggtaaag gctcatcatc
     1621 attaaaatta cgcttaaaag gttatttgcc ggtgacctgt ctggaaggta cgcgtaatca
     1681 acgcatcgcc gcgactattc gtcataatcg cgctcgtgga cgccatcaaa tcaccgccat
     1741 gtcggaaatc gtccgtgaac ttagccagtt gggatgggac gataataaaa ttggcaaaga
     1801 gctgggaatg gacagcgacg aagtgctgcg cctgaagcaa attaacggtc tgcaagagct
     1861 gtttgccgac cgtcaatatt cccgcgcctg gactgtcaaa taactacagc tggcgcagtc
     1921 gttcagctgc tgccagcaac gtcgattcct tcttggcaaa acagagacga atcagtttat
     1981 gagggaaggg atcggcgcaa aacaccgata gcggaatcgc cgctacgccg tgctcctgcg
     2041 tcagccactg gcaaaactca acatcatcca gggtagatac ggcgctgtaa tccaccagca
     2101 aaaagtatgt accttcacac ggtaaaatct ccagccggct ttcatttaaa gcattcacca
     2161 gaatatcgcg cttctggcga taaaagtccg gtaacgcaag ataatgctca ggttctgcac
     2221 gtagcatatc agcaagcgcc agctgtgccg gggtattcac cgaaaaggtc agatactgat
     2281 gtaccttgcg aatttcggcg ctgatgggcg ctggcgcaac acaataaccc actttccagc
     2341 cggtcatatg ataggtcttg ccaaatgaag aaaccgccac tgcccgctca cgcagctgcg
     2401 gatgcgccag cacactggca tggccctgtt gtgaaaagtt gatgtgctcg tagacttcat
     2461 cgctaatgac aaaaatctcg tgcccggcga tcgcctgcca caaagcggcg aaatcagcct
     2521 gctgccagac agttgcactg gggttatgcg gagtgttgag gatcaccagt ctggtgcgct
     2581 cgcttaacaa tgcggcaaat tcctgccagt caacgcgaaa atgcggtggt tgcagtgcca
     2641 tacgcttcac tattccccca gaaagcgcga tggcggggga gtaactgtca tagctgggat
     2701 caaaacaaat cacttcatcg ccattgcgca ccagtgcggt aatcgccgcg tataacgctt
     2761 ccgtcgcccc tgccgttacg gtgatatcgc tatcggcatc tggttgatag ccatacaaac
     2821 gttccgtttt ctgagcaatc gcctcgcgca aggcctgcac gccggtcatg ggcgcgtatt
     2881 ggtttgcccc ctgggcaacg tggtacgcca gccgctcctg taaatagcgc ggaccatcaa
     2941 aatcaggaaa gccttgcgac aggttaatcg cctggtgttg ctgcgccagc gcgctcatct
     3001 gggtgaaaat agtggtgcca agttgtggaa gtttgctttg tggaatcaga gggttatttg
     3061 tcatttttat tgtacctgac gaagttgcgt gttgaaggca ctataacacg atgctagtat
     3121 ttggcaatca agacgtttag atgtctaaat aaaacaataa ggacaacaca acatgcctca
     3181 caatcctatc cgcgtggtcg tcggcccggc taactacttt tcacatccag gaagtttcaa
     3241 tcacctgcac gattttttca ctgatgaaca actttctcgc gcggtgtgga tctacggcaa
     3301 acgcgccatt gctgcggcgc aaaccaaact tccgccagcg tttggacttc caggggcaaa
     3361 gcatattttg tttcgtggtc attgcagcga aagcgatgta cagcaactgg cggctgagtc
     3421 cggtgacgat cgcagcgtgg tgattggcgt cggcggcggc gcactgctcg acaccgcgaa
     3481 agccctcgcc cgccgtctcg gtctgccatt tgttgccgct ccgacgatcg ccgccacctg
     3541 cgcagcctgg acaccgctct ccgtctggta taacgatgcc ggacaggcgc tgcattatga
     3601 gattttcgac gacgccaatt ttatggtgct ggtggaaccg gagattatcc tcaatgcacc
     3661 gcaacaatat ctgctggcgg ggatcggtga cacgctggcg aaatggtatg aagcggtggt
     3721 gctggctccg caaccagaaa cgttgccgct aaccgtgcga ctggggatca ataatgcgca
     3781 ggccattcgc gacgtattgt taaacagtag cgaacaggcg ctgagcgatc agcaaaatca
     3841 acagttaacg caatcatttt gcgatgtggt ggatgctatt attgctggtg gtgggatggt
     3901 cggtggtctg ggcgatcgtt ttacgcgtgt ggcggcggct catgccgtgc ataacggtct
     3961 gactgtcctg ccgcaaaccg agaaatttct ccacggcacc aaagtcgctt atggcattct
     4021 ggtacaaagc gccttgctga gtcaggatga tgtgctggcg caattaaccg gggcgtatca
     4081 gcgttttcat ctgccgacca cgctggcgga gctggaagtg gatatcaata atcatgcgga
     4141 gatcgacaaa gtgattaccc acaccctgcg tccggtggaa tccattcatt acctgccagt
     4201 cacgctgaca ccagatacgt tgcgtgcagc gttcgaaaaa gtggaatcgt ttaaagcctg
     4261 acgtgcaaat ttagcagcag cgcgcgccgc cttttccacc gtagcgcgcg tcctgccgct
     4321 cacggaaaaa ctcttcgtag gtcatcggcg tttgatcggg atggttaacc cgcatatgtt
     4381 cgacatagtt gtcgtaatca ggcataccaa tcatcagctt cgccgcctga cctaaatatt
     4441 ttccggcttt tgccagtgaa tcaaacatct tggcctccgc taaccatgtt gctgaaagag
     4501 tgccggatgc ggcgtgaacg ccttatccgg cctacaaatg ctatcaacgc gctcggtcag
     4561 tcccctcgcc ccatcgggga gagggttagg gtgaggagga accctcggca ctatgccaac
     4621 attcgccaac atcccccctc actctgactt tagtgtgcgc cttttgcctg cgccacgatc
     4681 tcctcgacat tttccggcat tggctcatac ggcgtttctt tcgccgttgg cttcggatct
     4741 ttcaatgccg ccagtgccgt cttaatcgag aacagcgcca gaaccaccac gaccaccata
     4801 aagaagatgg ttaacccggc atccagacgg ttgttgaaca ccagttgcgc cagctgtgac
     4861 tcagtatact gcgacggaat attgccgctg tcgatcattg cctggaactt attagcaatg
     4921 gccaggaagc cgactttcgc atccgggcta aacgctttct gccagcctgc ggtcagggta
     4981 caaatcagca gccaggccgt tggtaccagc gccacccagg cgtaacgttg acgtttcatc
     5041 ttgaacaaca ccacggcaca gagcatcagc gccatccctg ccagcatctg gttggcaata
     5101 ccaaacagcg gccacagagt gttaatgccg cccagcggat cgaccacgcc ctgatggagg
     5161 aagtagcccc acgccagtac gcacagcgct gttgccagca ggttagcagg cagtgaatcg
     5221 gtccgcttca ggcccggaga aaccacgccc agcagatcct gcaacataaa gcgcgcagca
     5281 cgcgtacccg catctaccgc cgtcagaata aacagagctt caaacagaat ggcgaagtga
     5341 taccagaacg ccacatccat cataccaccc agcgcaccgt gcaggatgta agccatcccc
     5401 accgccagcg tcggcgcacc gcccgcacgg gaaatgatcg actgttcacc cacttcgctg
     5461 gcaatctggt tgagcgtatc tggtgtaatg ctaaagcccc agctactcac cacctgcgcg
     5521 gcagaagcga ctacatccgc cgtccctgcc ggagccagca ccgccattgg gctgttcatg
     5581 gcaaaataca cgcccggatc gatgatacag gcagaaacca gcgccataat cgccacgaag
     5641 gattccatca acatcccacc gtagccgata aagcacgcct gcccttcgtt cgccagcatc
     5701 ttcggcgtgg tgccggaaga gatcagcgca tggaagccag acaccgcacc acaggcgatg
     5761 gtgataaaca ggaacgggaa caggttaccg gtccataccg ggccagtgcc atcgacaaat
     5821 ttggtcagcg caggcatggt cagcgtcggg cgcataatca aaatgcctac cgccagaccg
     5881 acgatagtcc cgattttcag gaaggtcgag agatagtcac gcggggccag cagcaaccac
     5941 accggcagca ccgccgccac aaaaccgtag cccaccagca tccaggtcag ctgcacgccg
     6001 gtaaagtcaa agtacggtgc ccaggtcgga ctttctgcca cccagccgcc agagataatg
     6061 gcgaaaatca ggaacaccag gccaatcact gacacttcgc caatgcggcc cggacgcaga
     6121 tagcgcaggt agattcccat aaaaatcgcc agcggaatgg tgaacgcaac ggtatacgtt
     6181 ccccacgggc tatgagtcag ggctttcacc acgatcatcg ccagtactgc aaggataatg
     6241 accatgatca taaagcaggc taccagcgca atcaccccgg cagttggccc catctcttct
     6301 ttgaccagct cacccagcga tcgaccgtca cggcgcgtag aaacaaacag caccatgaaa
     6361 tcctgcaccg caccagcgag aaccaccccg gcgagcagcc agatcatccc tggcaggtaa
     6421 cccatttgcg ccgccagtac cggcccaacc aacggacctg ctccggcaat ggccgcaaaa
     6481 tggtgaccga acagcacttt cttgtccgtc ggcacatagt ccagcccgtc gttatggcgc
     6541 accgctggcg tcatacgcgt cgggtcaacc gccagcacat ttttggcgat atacagccca
     6601 taaaaacggt aagcgatcag atagatacag accgacgcca ccacaatcca cagcgcgttg
     6661 atctgttccc cacgatttaa agcaatgtat cccagagcaa atgctcccat tacagagagc
     6721 actgtccaga cgaggtattt ccctgatttg ttcatagttg ttatccgtgt gcgtgtccat
     6781 agagatgtta cattttgttt ctataacatc tttgtacgat ttaacaacac ggtaaccatg
     6841 taaatcggag ttgaaaccaa tatttaactt aacaatgtta actcgatcac tccgttaacc
     6901 gagttttcct gcaatctcat ttaattctgt cgggctcatc ccaaaactgc cgtacccagc
     6961 cgacaagtgc agcaacgccg cccctgttca tcgaaaacga cgatttccca gctctgattt
     7021 tgccgcccaa gatgcagcgg ctggcagacg ccgcgtacct tgccttcaga caccgggcga
     7081 tgatgggtgg cgttaagttc cgtacccacc acacactgcc cgtcacgggt catcataaat
     7141 ccggccatcg atcccagcgt ttcagccagc gccgccgacg cgccgccatg cagcaggcca
     7201 aacggctgat gagtacgggt atcaaccggc atttcggctt ccagcacatc atctcccaga
     7261 cgggtataca caattcccag atgcgccacc attgtgttat cgctggtggc gttcagttcg
     7321 tcgagcgtta aatggcgttt ccagatcatg cttatgcccc cagcgttgag ccgccatcga
     7381 ccacaatatc ctgtagggtg atatggctgg cgaggtcaga ggcgaggaac aaaatcgtgt
     7441 tggcgatctc ttgtggacgg gcgattttcc ccagcggaat gccgagttta aactgctcgc
     7501 caaagccgcg aatacgctgt tcttcggcgt catcgctcac ccacagcgtg cgttgcatat
     7561 cggtgtcggt ggagccaggc gaaaccacat tacagcgcac gccgctaccc gccagttcca
     7621 gcccgacgct caacgccagg cttttcagcg ccgctttcga tgcgccataa gcactcatac
     7681 caatacgcgg cgtgtgtgcg gcgtcggacg ccacagtgac aatcgccccg ccccgctgac
     7741 ggcgaaactg gttcatggtt tgctggaaca ggttaaacgc accgccgacg ttaaccgcaa
     7801 aagtctgctg ccagtcctct ttactgagct gatcggtcgc gcccatgcgc aaaattcccg
     7861 ccgcattgat cagcacgtcc agtcgctccg tttcagctaa cagtcgctga catacctgcg
     7921 ccacctgccc ggcgtcggca acatccatta cttcggtcgc aaagggatat tgctcctgag
     7981 tgaacgcttg atcaaaacct gtaactttcg ctcccgcctc aacaaacgcc agcgccgtgg
     8041 cgtagccgat acctttacct gcgccggtta cccagacatt tttaccgctg aaatccatta
     8101 tttcacctcg cgggagagta gcttccacca ggcgtcgatg gtcgggtttt tcgccagcat
     8161 gacaaagtcg atatcaccat gcactttgcg ccagcgcgcc gccagcgcca tcatgcgcac
     8221 cgaatccaga ccgtagtcga tcaggttgtc gtcatcgaac ggttcatcgg actcgtccag
     8281 caacggcagg ataacctcac gcagcgccgc tttgctggcg gggacaggtg ctggcagtaa
     8341 ttcttcagtc atcaccaccc ggccagaccg cccggccaca tatttcagcg acatcaaatg
     8401 ctcgtcacgg ctgaaatcgg ccagcgcatc cgccaccata aacggtttaa tatcgcgcat
     8461 aaatgcgtcg gttgcggtgg tcatacagcc aatgtgggca tataccccgg taataatcag
     8521 ctggttacgt ccactctctt tgagcatttg ctccagcgga gaacgatgaa acgcgctgta
     8581 gcgccacttc accagcaccg tgtcgtcggc atctggcgtc aggcgatcca ccaccttttg
     8641 ctgttccggc gaacgggtca ggcccggccc ccacatatca ttcaacagcg cccgatcttc
     8701 atcgctctgc tctttcggct gggcggtgta ataaaccggg atattgtgct gtttgcagta
     8761 gtcgcgcagc gcagcaatat tcgcgatcac ctgctccatc atcgggcagt tctcgcccca
     8821 gaagctgaca aaatagtcct gcatatcatg gattaacaac gcggcacgtt gcggttcaaa
     8881 ggcccagtca actttattct gcggaatatc gtgagactcc ggcagtgcgt aagcctgtaa
     8941 ttttggaata gccatagtgt tctctccttc aggctgatgc gcgtgacgcc agccactgac
     9001 gtaattgttt tttatcgact ttcccgaccg ccgtcagcgg aagtgaatcc acacactcca
     9061 cgcgatccgg taatttaaat tcggcaatac cctgttcacg caggaaacga cgcacctgca
     9121 ccgcgcgcag cggctctttt accaccagat aagcgcagct tttttcgccc atcagctcat
     9181 cttccatgct caccagtgcg gcatagatca ctgccggatg gcgcagcagc aggttttcga
     9241 tctcttcggc agcgatcttc tcgccgccac ggttgatctg atctttctcg cgcccctgca
     9301 cggtgatgta accctctgga tcaatagaga tcagatcgcc ggaacagtaa aaaccgttgg
     9361 catcaaaggc gctggcattg tgctgcggac ttttgtaata accgcggaag gtgtacggcc
     9421 cgcgcgtcat caggcgtccg acttcccctt gcggcagtgg atttccttcg gcatcggcaa
     9481 cccacacttc atcgtccgga cacattgggt aaccctgggt atggataatt ttctccgcgc
     9541 tatcatcaag acgggtgtag ttcaccagcc cttccgccat gccaaacacc tgctgcaact
     9601 gacagccaat ctcagcggga atacgcgccg caagggtggc agaaagacgt gcgccgccga
     9661 cctgtaacag tttcagcgag gcaagctgcg cccggctttc gccttcggtc agcgcctgca
     9721 accacaggct gactgcgggt ggcaccagcg cggtaacgtt aacctgatgt ttttcaatca
     9781 atgggaaaca gagcgtggcg ctgggatcgg ccgccagaac aaccgttcct ccggcaagaa
     9841 agacgcccag cgatcccggc gaactcatgg cgtagttatg agccgccggg atcgcgcaca
     9901 ggtagcgtgt ctgttgtgtg aactgacaaa tctcgacgct acgacgcacg ctgtagtagt
     9961 agtcgttatg agtgcgcggg atcagtttcg gtgtgccggt ggtgccgccg gaaagctgga
    10021 aataggccac ttcatcagca ggtgatggcg tggcagtaaa atcctcagcc ggatggttaa
    10081 tcgcatcctg caagttatgc tcaccgctgt cgttgtgcag ttgcaccacg cgaatggagg
    10141 aatgttctgt gacgaaagta ttgaggaaat catccccgct aaacagcgca tgttggcgat
    10201 cggcaatcag caatgcgggt tcaatctggc tggcataggc gttcagttca ctacgctgat
    10261 ggctgaacag cgccagcacc ggcgcaacgc ccagtttcag cagcgcgaaa aaggtaatat
    10321 acaattcagc gacgttaccc agttgtacca gcgcggtttc accaggttta atgccctgac
    10381 ggcgtaaact acacgcgagg ttatccgccg cctgattcag ctcccggtaa ctcaactgtc
    10441 gctcgccgtc gataaccgcg atgctgtcac tcgcagcgtg gcgagtcaga atgtcggtca
    10501 gcggcaaatc ctgccagtag cctttttccc gatagcgacg ggcaaactct tccggccagc
    10561 gggtgaatgg aatgctcatc ctcgctcctt aatgcaatcc aaaaacgttc aacatggtag
    10621 aaagtttgac gcctgtttcg cgccactcac ccaacggtga cgacgcaggc acaatccccg
    10681 ctccggcaaa cagacgcacc tgattttccc gcagcttcgc gcagcggatg gtcaccaccc
    10741 attcgccgtt accttcgctg tcacaccaac ccacaatgcc gccaaacagt tcgcggtcga
    10801 atggctccag ttcagcaata acctgggtcg cggcctgatg cgggaaaccg ctcagcgcgg
    10861 gggttggatg cagcagacag gccagagtca gtgcgttttc ttgcgaattc gctttacctt
    10921 caaagggagt tgcgagatgc cacagcgtcg gcgtggtaat caattgtgga gaggagggaa
    10981 cgtgtaactc actactgcgt tcgcgcagta cctctttcat cgcctgagtc accagttcat
    11041 gttcatggcg atctttttct gacgccagca gacgattacc cgcttcgcga tcgagcactt
    11101 catccggctg acgacgcgcg gaaccggcta acggaatgga gctaaaacgc tcgccgtctt
    11161 tacgtagcag cagttccggg ctggccccca gcaggacgcc accatcagcc agcgggacat
    11221 ggaagttgta actaaccggg ttttgcgcaa tcaaccgttc cagcaatacg ccactatcaa
    11281 tggcggcgtc agtggtgata tcaatcaatc gtgacaacac cactttgtcg acctgcggcg
    11341 tggcggtaag tgcggcggcg cgagcaacca tctgttcaaa cgtggtttgt tcaggaattg
    11401 cctggcgttc caccacgttc agcgactggc tgcgggtaaa acggcgggct gaggtctgtt
    11461 tttcctggcg ggagaacgac tgccaggatt cgggaatata cagcgacgaa ggctgacgtg
    11521 gatcgaaggg aatcgccccg accatcaccg gatttttgat gccctgcgct ttggcatcgg
    11581 caaacagcgc ggcgagtttt tgctggaagg gactgtcggg cgaatccccg ttcacagccg
    11641 gttcatcgaa gcgggcgaaa catcctgacg tcgtaaaact gcggtacggc gacataaaga
    11701 aaaagcgatt gggcgcaagt gttgccatgg tctgctgtac ttcctcagcc agtgacgtat
    11761 ccatatcatc ctccacaaaa tgataaaggc tttaataatg attatcattt atattttcgg
    11821 tcgctaacct aaaagcaaac gcgcactatg tcaactcttg aggtaacgca atctgcaact
    11881 cggggttgca tctggttgtg gttacaatga aaatgagaag cattattgat ggattcgcat
    11941 aagcgcaatg tgatgtcctg cgccgttctg ccccctctcc cttccagggt gagggctggg
    12001 gtgagggtta atgttcgcac cagtgctggc tgttcccctc accctaaccc tctccccaaa
    12061 ggggcgaggg gacggattgt gcgctttgtc gaatttgtca ttacgccctt aaccttatta
    12121 ataacaggaa gctgatttgt gagactcgcc ccgctctacc gcaacgccct tctattaaca
    12181 ggacttttgc tttcaggaat agccgcagtt caggccgctg actggccgcg tcagattact
    12241 gacagccgtg gcacacatac actggaaagc cagccgcagc gtattgtttc caccagcgtc
    12301 accctgaccg gctcactgct ggcgattgat gctccggtga tcgccagcgg cgcgaccacg
    12361 ccgaataacc gcgtcgcgga tgaccagggc tttttacgcc agtggagcaa ggtggcgaaa
    12421 gaacgcaaac tgcaacggct ctatatcggc gaaccgagcg ccgaagccgt tgccgcgcaa
    12481 atgccggatc tgattttaat tagcgcaacc ggcggggatt cggcgctggc actgtatgat
    12541 cagctttcca ccatcgcccc gacattaatc atcaattacg acgacaaaag ctggcagtcg
    12601 ctgttaacgc agcttggcga aattaccggg catgagaaac aagcggcaga gcggattgca
    12661 cagtttgata agcaactggc agcggcgaaa gagcaaatca aattaccgcc gcagccggtc
    12721 actgccattg tctataccgc cgctgcacac agtgccaatc tctggacgcc ggaatcagca
    12781 caagggcaga tgctggaaca actcggcttt acgctggcga agttgcccgc agggttaaac
    12841 gccagccaaa gccagggcaa acgccatgac atcattcagc ttggtgggga aaatctggct
    12901 gctgggttaa atggcgagtc actattcctg ttcgccggtg atcagaaaga tgccgatgcg
    12961 atttatgcca atccactgct cgcgcacctt cccgcagtac aaaacaagca ggtttatgcg
    13021 ctgggaaccg agacgttccg tctggattac tacagcgcca cgcaagtgct ggaacgactt
    13081 aaggcgctgt tttaagcatt aactgtcaga cgctgtcacc tgcggcggcg tctggcgaaa
    13141 acgtcgcaac tccaccagca ccagcaataa caacacgccg ataatcaaca aaccaaaacc
    13201 gcttgcgctt gcggaagcaa ccggtgtcat catcgcgccc aaaccaccca gcagcgccgc
    13261 gcctatggca tcgcccgtca cgttctgcgc cgtccacaaa ccgttaatcc gccctaacat
    13321 cgcttccggg gtttgcgttt gcagcattgt atattgcagc aacgaactaa ccgcgctcag
    13381 ccagccgaac agcgccagac aaaccacgcc taaaatccac atcggcatca ggccaaacag
    13441 accaatggcg aggaacgatc ccagcgtgga gagcagcatc aataaccctg gtcgcgcact
    13501 atgtgccagc ttcccgctgg ttaacgcacc aatagccgcg ccgagcggga tcgccgcgta
    13561 gagaaaacca atctgtgccg ctgacatctg ccagttgtca gccagcgccg gatacagtac
    13621 ccgcaccgcg ctcgccatcg tcaataaacc acccagcagc gcaatcccgc ccaccagcgg
    13681 gctggcaagc agaaaacgaa atcctgccag taatgatttc aacggatgct cacgcggctg
    13741 cggtggcggt ggcaacgccg gaaggcttaa caacggtagc aaggtaataa acgtgcccgc
    13801 cgccgccagc ccgtagttcc aggctacgcc accggtcgcc agcaataaac cgccaatcat
    13861 gggcgaaatc accgacccca gacgcacggt caacatggtg atcgccccgg cctgcattaa
    13921 gttttcacgc cctaccagtg ctggtgtcgc cgccaatagc gccgtaacgc caagcgatgc
    13981 gaaaaaacca tcccataaac caagtaaata gattgccagc aatgacggct ccggcagcag
    14041 tgcattaagg cacagtccaa tgaagccaat gccacaggtg ccgcgcgcca gcaaaatcac
    14101 ttttttgcgc tcatagcgat ccgccagcac accgccaacc atcaggccaa caaacatcgc
    14161 gccgccggtc agcgtcaccg aaagccccac ctgccaggta gaatgcgtca tcatctggat
    14221 ctgcaccggc accgcgacgc cgagcaaacc cagagacaca attgagataa aacgagcgag
    14281 gaatactgcg cgaaacgccg ggtgcgtttt caacaggctg aggttaagca gccaggattg
    14341 tttattcatt acaatgcctt gccatcaaat attttaaata cctattctta ggctgcacat
    14401 gctaacatat ccaaataaga tcgataacga taattaattt cattatcatg gaagttcgta
    14461 tgtctggttc tgttgccgtg acacgcgcca ttgccgtgcc cggattgctg ttattactga
    14521 ttatcgcgac ggcattaagc ctgctcattg gggcaaaatc actccccgct tccgtagtgc
    14581 tggaggccct ctccggcacc tgccagagcg ccgactgcac catcgtgctc gacgcgcgac
    14641 tgccgcgcac ccttgccggt ttacttgcag gcggcgcgct tggccttgcc ggggcgttga
    14701 tgcaaaccct cacccgaaat ccacttgccg accccggctt gcttggcgtg aatgccggag
    14761 ccagctttgc cattgtgctg ggtgcggcgc tgtttggtta ctcatccgcg caggaacaac
    14821 tggcgatggc cttcgccggg gcgctggtgg cctcattgat tgttgccttt accggcagtc
    14881 agggcggcgg gcagttaagt ccggtgcgtt taaccctggc gggcgtggcg ctggcggcgg
    14941 tgctggaagg gctgaccagc ggcatcgccc tgcttaatcc tgatgtctac gatcaactgc
    15001 gtttctggca agccggttcg ctggatattc gcaatctaca taccttaaaa gtggtgctga
    15061 tcccggtgct gatcgccgga gcaaccgcgc tattactgag ccgcgcgctg aacagtttga
    15121 gcctcggcag tgacaccgcg acggcgctgg gcagtcgcgt ggcgcgcaca cagttaattg
    15181 gtctgctggc gattaccgtg ctttgtggta gtgcgacggc agtagttggc ccgattgcct
    15241 ttattggcct gatgatgccg catatggcgc gttggctggt aggtgccgat catcgctggt
    15301 cgctgcccgt cacgctactt gctacccctg ccctgctgct gtttgccgat atcatcgggc
    15361 gggtgattgt gcccggcgag ctgcgcgttt ctgtggtcag tgcgtttatt ggtgcaccgg
    15421 tgctgatctt cctcgtgcga cgtaaaacgc gaggtggtgc atgatttacg tctctcgccg
    15481 attactcatc acctgtttgc tgctgatttc cgcctgtgtg gttgcaggta tctggggatt
    15541 acgcagcggt gccgtcacgc tggaaacctc gcaggtattc gccgcgctga tgggcgatgc
    15601 gccgcgcagt atgacgatgg tagtcaccga atggcgttta ccacgcgtgc tgatggcgct
    15661 gttgattggc gcggcactgg gcgtcagcgg tgcgattttt cagtcgctga tgcgtaaccc
    15721 gctcggcagc cctgacgtaa tgggctttaa caccggggcg tggagcggcg tgctggtggc
    15781 gatggtgctg tttggtcagg atctgacggc tatcgcgctg gcagcaatgg cgggcggcat
    15841 tgtcacctcg ctgctggtct ggctgctcgc ctggcgtaac ggtatcgaca cctttcggtt
    15901 gattattatc ggcatcggcg ttcgcgccat gctggtggcc tttaatacct ggctgttgct
    15961 gaaagcgtct ttagaaacgg cgctaacagc gggtttgtgg aatgccggat cgctcaacgg
    16021 cctgacgtgg gcaaaaacct cgccttccgc acccatcatt atgttgatgc tcattgccgc
    16081 cgccttactg gtacgccgga tgcgcttgct ggaaatgggc gatgatactg cgtgtgcgct
    16141 gggcgtcagt gtcgaacgtt cgcgtctgtt aatgatgctg gtggcggtgg ttcttaccgc
    16201 tgcggcaacg gcccttgccg ggccgatttc ctttattgct ttagtcgcgc cacacattgc
    16261 ccgacgcatt agcggcaccg ctcgctgggg gctgacccag gcggcgctgt gcggggcgct
    16321 gttactgctg gcggccgatc tctgcgctca gcaactgttt atgccgtatc aacttccggt
    16381 tggcgtcgtt accgtcagcc tcggcggtat ttaccttatc gtcttgttaa ttcaggagtc
    16441 tcgcaaaaaa tgaccgaatc agtagcccgt ttgcgcggcg aacagttaac cctgggatat
    16501 ggcaaatata ccgttgcgga aaatctgact gtagaaatac ctgatggtca cttcacggca
    16561 attatcgggc caaatggctg cggtaaatcc actttactgc gtactttaag ccgcctgatg
    16621 acgcctgctc acgggcatgt ctggctggat ggcgagcaca ttcaacatta cgccagtaaa
    16681 gaggttgcac gccggattgg tctgttggcg caaaatgcta ccacgccagg cgatatcacc
    16741 gtgcaggagc tggtggcgcg tgggcgttac ccgcatcaac cgctatttac ccgctggcgc
    16801 aaagaagatg aagaagcggt aacgaaagcg atgcaggcca cgggaataac tcatctggca
    16861 gatcaaagcg tggataccct ttctggcgga caacgccagc gcgcgtggat cgcgatggtg
    16921 ctggcccagg aaacggcaat tatgctgctc gacgaaccca cgacctggct ggatatcagt
    16981 catcagattg atctactgga actgttaagc gaactgaacc gcgagaaagg ctataccctg
    17041 gcggcggtgc tgcacgatct taatcaggcc tgtcgttacg ccagccattt gattgcattg
    17101 cgggaaggga aaattgttgc tcagggagcg ccgaaggaga ttgtcactgc tgaactgatt
    17161 gagcgcattt atggtctgcg atgcatgatc attgacgatc cggtagccgg aacgccgctt
    17221 gtggtgccgc tcggacgaac ggcaccttca accgcaaata gttaaactaa gtggtctgcc
    17281 atcatggcat cctgttttct ggatgccatc gcatagcgca ataacacgct accacaagcc
    17341 accatcccgc cgatcagcgc ggaaaggatc acaataatcg ccttacccgg accgtctttt
    17401 ttcactggca atgacgggct taactgatat ttaaacggcg taaaattcac atcgttgata
    17461 tttgcttttg ttaactgctc aacaagatac tgacgattac gtaattcacc gttcagttcc
    17521 gcaacgtcag tgaccgcttt ttcaatttcc agtttgcgtt caataccgtc tgcgccgaga
    17581 gaaatagaga aatcggggtc atctttaacg gcctgaccat tactgtatac gggcttttta
    17641 attcccgccg cgttggcaat gtcgagtgaa taattgaggc gctgaatgtt tgcatcaagt
    17701 tgatttttcg ttttaatgcg atcctgagcc agtttttctt tttcaaactg ggttttgatc
    17761 tccagtttat tacggacgtt ttctagtgac tctttcacca ccaacgcaga gatataatcg
    17821 atatacccgc tcaaaacggt ctgcgcctct tcactggttg gcgcggtaaa acttagcgtc
    17881 caggaggtat acagtgacgg ttcatctttt ttcttactgg cattgtcatc aaccgctttc
    17941 attttttcgc tcaatgcaac aatagcgcga tgcaaatcca gttcatcgat tttcgcctct
    18001 tttaattggt ccatcacata aggtgatgaa cgcaggtact cttccagcaa gctaaccgac
    18061 tgaaacttct tgataaacag gttaaatgct tctgtacgat caattttgat atccagatcc
    18121 agcactcgaa gcttagtgaa tgttttctcc agctcttgcc actgaacagg ttctggaggc
    18181 gtgacaaccg ccgcgctggt ccatttttgc ggcaggatga aagagatcag caagcctgcg
    18241 caggcaaacg caaaaatgac cgccatgacc gtttttttgg cccgccataa aactgcgatt
    18301 agattaagta aatcaatttc attattactg ggcgacgcca gaggatactc aggaaaatga
    18361 gcgtcacttc cctgtttaat attcagtgat gacatggggt ataacctgaa aatgagtcca
    18421 ataggggaaa tctccacggc gctcacttta ccagttggtg ataattatcc gaagctgaag
    18481 tttgtaaatt ccttccactg aat
//
LOCUS       DAPGWB010000087        18480 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.087, whole genome shotgun sequence.
ACCESSION   DAPGWB010000087 DAPGWB010000000
VERSION     DAPGWB010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18480
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.087"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..589)
                     /gene="rsmG"
                     /locus_tag="RHX79_002873"
     CDS             complement(<1..589)
                     /gene="rsmG"
                     /locus_tag="RHX79_002873"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDV2198025.1"
                     /translation="MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVR
                     DPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV
                     RFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR
                     FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGE"
     gene            complement(653..2542)
                     /gene="mnmG"
                     /locus_tag="RHX79_002874"
     CDS             complement(653..2542)
                     /gene="mnmG"
                     /locus_tag="RHX79_002874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDV2198026.1"
                     /translation="MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ
                     MSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRV
                     LYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD
                     GKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQ
                     HGDNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRY
                     CPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENA
                     KIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAA
                     RLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTE
                     IGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREAS
                     GEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNE
                     NTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM
                     LRRSA"
     gene            complement(2921..3364)
                     /gene="mioC"
                     /locus_tag="RHX79_002875"
     CDS             complement(2921..3364)
                     /gene="mioC"
                     /locus_tag="RHX79_002875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HDV2198027.1"
                     /translation="MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDL
                     SASGIWLIISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGTIGIGSREYDTFCGAI
                     DKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWINLLK"
     gene            complement(3454..3912)
                     /gene="asnC"
                     /locus_tag="RHX79_002876"
     CDS             complement(3454..3912)
                     /gene="asnC"
                     /locus_tag="RHX79_002876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HDV2198028.1"
                     /translation="MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVE
                     KMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTT
                     GHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQNPIMRTIKP"
     gene            4064..5056
                     /gene="asnA"
                     /locus_tag="RHX79_002877"
     CDS             4064..5056
                     /gene="asnA"
                     /locus_tag="RHX79_002877"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HDV2198029.1"
                     /translation="MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGT
                     QDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPD
                     EERLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPF
                     LPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDY
                     DDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLQL
                     EWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL"
     gene            complement(5061..6512)
                     /gene="viaA"
                     /locus_tag="RHX79_002878"
     CDS             complement(5061..6512)
                     /gene="viaA"
                     /locus_tag="RHX79_002878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA stimulator ViaA"
                     /protein_id="HDV2198030.1"
                     /translation="MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKA
                     AITDDVPRWREALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRL
                     NSPWAEQARQLVDANSTITSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQ
                     ERMTLSGQLEPILADNNTAAGRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQ
                     LGRSREAKSIPRNDAQMETFRTMVREPATVPEQVDGLQQSDDILRLLPPELATLGITE
                     LEYEFYRRLVEKQLLTYRLHGESWREKVIERPVVHKDYDEQPRGPFIVCVDTSGSMGG
                     FNEQCAKAFCLALMRIALAENRRCYIMLFSTEIVRYELSGPQGIEQAIRFLSQQFRGG
                     TDLASCFRAIMERLQSREWFDADAVVISDFIAQRLPDDVTSKVKELQRVHQHRFHAVA
                     MSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR"
     gene            complement(6506..8002)
                     /gene="ravA"
                     /locus_tag="RHX79_002879"
     CDS             complement(6506..8002)
                     /gene="ravA"
                     /locus_tag="RHX79_002879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA"
                     /protein_id="HDV2198031.1"
                     /translation="MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFL
                     LGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTS
                     GYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEA
                     DSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKE
                     IGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVD
                     LILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKT
                     ALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERNALEQWLS
                     KGGEIRGKLNGIGFAQKLNLEVDSAQHLVVRDVSLQGSTLALPGSSAEGLPGEIKQQL
                     EELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQC"
     gene            8225..10093
                     /gene="kup"
                     /locus_tag="RHX79_002880"
     CDS             8225..10093
                     /gene="kup"
                     /locus_tag="RHX79_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity potassium transporter Kup"
                     /protein_id="HDV2198032.1"
                     /translation="MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGV
                     ERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSML
                     VIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKH
                     GTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIAL
                     GAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNP
                     FFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMES
                     GQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHW
                     NKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRR
                     MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILL
                     TLRTEDAPYVHNVRRVQIEQLSPTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMME
                     TSFFMSHESLILGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI"
     gene            10260..10679
                     /gene="rbsD"
                     /locus_tag="RHX79_002881"
     CDS             10260..10679
                     /gene="rbsD"
                     /locus_tag="RHX79_002881"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709562.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HDV2198033.1"
                     /translation="MKKGTVLNSDISSMISRLGHTDTLVVCDAGLPIPKSTTRIDMAL
                     TQGVPSFMQVLGVVTNEMQVEAAIIAEEIKQHNPQLHETLLTHLEQLQKHQGNTIEIR
                     YTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF"
     gene            10687..12192
                     /gene="rbsA"
                     /locus_tag="RHX79_002882"
     CDS             10687..12192
                     /gene="rbsA"
                     /locus_tag="RHX79_002882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
                     /protein_id="HDV2198034.1"
                     /translation="MEALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKS
                     TMMKVLTGIYARDAGTLLWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFL
                     GREFVNRFGKIDWKTMYAEADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFES
                     KVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQ
                     FIAEREVASLTEDSLIEMMVGRKLEDQYPHLDKAPGDIRLKVDNLCGPGVNDVSFTLR
                     KGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISE
                     DRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNVKTPSMEQA
                     IGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIIL
                     VSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGKLNRVNQE"
     gene            12197..13162
                     /gene="rbsC"
                     /locus_tag="RHX79_002883"
     CDS             12197..13162
                     /gene="rbsC"
                     /locus_tag="RHX79_002883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HDV2198035.1"
                     /translation="MTTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTIN
                     NLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVA
                     AALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADL
                     FGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNK
                     IKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIV
                     GTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ"
     gene            13187..14077
                     /gene="rbsB"
                     /locus_tag="RHX79_002884"
     CDS             13187..14077
                     /gene="rbsB"
                     /locus_tag="RHX79_002884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
                     /protein_id="HDV2198036.1"
                     /translation="MNMKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSL
                     KDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKM
                     ANQANIPVITLDRQATKGEVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGT
                     SAARERGEGFQQAVAAHKFNVLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEM
                     ALGALRALQTAGKSDVMVVGFDGTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKV
                     LKGEKVQAKYPVDLKLVVKQ"
     gene            14203..15132
                     /gene="rbsK"
                     /locus_tag="RHX79_002885"
     CDS             14203..15132
                     /gene="rbsK"
                     /locus_tag="RHX79_002885"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDV2198037.1"
                     /translation="MQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKG
                     ANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFV
                     NGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNK
                     TIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIR
                     TVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIR
                     FAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQR"
     gene            15136..16128
                     /gene="rbsR"
                     /locus_tag="RHX79_002886"
     CDS             15136..16128
                     /gene="rbsR"
                     /locus_tag="RHX79_002886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose operon transcriptional repressor RbsR"
                     /protein_id="HDV2198038.1"
                     /translation="MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELN
                     YAPSALARSLKLNQTHTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQ
                     RMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDN
                     SLLGGDLATQYLIDKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLSIPDGYEVTG
                     DFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDI
                     ELASFMTPPLTTIHQPKDELGELAIDVLIHRITQPTLQQQRLQLTPILMERGSA"
     gene            complement(16094..17521)
                     /gene="mdtD"
                     /locus_tag="RHX79_002887"
     CDS             complement(16094..17521)
                     /gene="mdtD"
                     /locus_tag="RHX79_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtD"
                     /protein_id="HDV2198039.1"
                     /translation="MSDKKNRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRS
                     PLAMQSAIISYTLTVAMLIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQL
                     VVFRVIQGIGGAMMMPVARLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVT
                     WATWHWIFLINIPIGIAGLLYARKHMPNFTTARRRFDITGFLLFGLSLVLFSSGIELF
                     GEKIVASWIALTVIVTSIGLLLLYILHARHTPNPLISLDLFKTRTFSIGIVGNIATRL
                     GTGCVPFLMPLMLQVGFGYQAFIAGCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGI
                     TVIIGLMIAQFSLQSPAMAIWMLILPLFILGMAMSTQFTAMNTITLADLTDDNASSGN
                     SVLAVTQQLSISLGVAVSAAVLRVYEGMEGTTTVEQFHYTFITMGIITVASAAMFMLL
                     KTTDGNNLIKRQRKSKPNRVPSESE"
     gene            complement(17544..18236)
                     /locus_tag="RHX79_002888"
     CDS             complement(17544..18236)
                     /locus_tag="RHX79_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HDV2198040.1"
                     /translation="MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELG
                     EQFGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQ
                     VIDHFLVMRICLEPQACLLAATVGTAEQKAHLNTLMAEMAALKENFRRERWIEVDMAW
                     HEHIYEMSANPFLTSFASLFHSVYHTYFTSITSDTVIKLDLHQAIVDAIVQSDGDAAF
                     KACQALLRSPDK"
BASE COUNT         4452 a         4581 c         4826 g         4621 t
ORIGIN      
        1 gttcgccatc cagggctgga acctgaagtt taaccactga ttcgacctga tattcttcgg
       61 gcaacaaagc gatttcatct tccggcattt gccctttcag cgcgtagaaa cggccttgct
      121 caccaggaag atggtggcac cagctcacca tatcgttcag agaggcaaaa gcgcggctaa
      181 ttacgccatc aaatggcggc tctgaaggaa actcttctac cctgctctgt actggttcaa
      241 tattctccag tttaagctca tgttgcacct gacgaaggaa acgcacgcgt ttaccaaggc
      301 tatccaacag agtgaaatgg gcttcaggac gcacgataga gagtggaatg cctggcagtc
      361 ctggtccggt gccgacatcg ataaaccgtt caccttgcag atacggtgcc accacaatgc
      421 tatcgagaat atggcgtacc agcatctcat taggatcgcg gaccgaagtc aggttgtacg
      481 ctttgttcca tttatgcagc atattcacgt aggcaataag ctggtttttc tggtgatcgg
      541 taagcgaaat acctgcgtct ttcagcagta aggagagttt gttgagcacg gtgattacct
      601 gttcttgatg cgttgcctgg taagcgggtg cttaccaggc atttttaatg cgttatgcgc
      661 tacgacgcag cataccctgt tttttcagcc acaccagcag aatggagatg gccgcaggcg
      721 tgacgccaga aatacgcgaa gcctggccga tagaggctgg tttgtgatcg ttaagtttgg
      781 cgatcacttc gttagaaaga ccggatacct ggcggtaatc cagtgtcgcg ggtagcaggg
      841 tgttctcgtt acgcagctgc ttttcgatct catcttgctg gcgcgcgata taaccttcgt
      901 atttaacctg aatctcaacc tgttccgccg cctgttcgtc tgtcaacgca ggggcaaacg
      961 gcgtcagcgt ggttaatttt tcataagtca tttccggacg acgcagcaga tcttcaccac
     1021 tggcttcacg ggaaagcggc gcagtcaggt gagcattcac ttcggctgca gcttccgccg
     1081 acggggttac ccaggtcgat ttcagacgct gacgctcacg ctcgatattc tcaagtttct
     1141 cgttaaagcg cgcccaacgt tcgtcatcca ccaggcccag ttcacgaccg atttcagtca
     1201 aacgcagatc cgcattatct tcgcgtagca tcagacgata ttctgcgcgc gaagtaaaca
     1261 tacgatacgg ttctttggtt cctaaagtgc acaggtcatc aactagtacg ccgagatacg
     1321 cctgagaacg tgccggagcc caaccttctt tgtcagcaga cagacgggca gcgttaagac
     1381 cggccagcaa accttgcgca gcggcttctt cgtaaccggt agtgccgtta atctgaccag
     1441 caaagaacag cccctggata aacttgctct ccagcgtcgg tttcaggtcg cgaggatcga
     1501 agaagtcata ctcaatggca taacccggac gcacgatctt cgcgttttcc atcccctgca
     1561 tagagcggac gatttgcatc tgcacatcga acggcaggct ggtggagata ccgttcggat
     1621 aaatttcatt agaggtcagt ccttccggtt caaggaagat ctgatgctga tttctgtcgg
     1681 cgaagcgcat gactttgtct tcgatcgacg ggcagtagcg tgggccgaca ccttcgatca
     1741 cccctgcata cattgggcta cgatcgaggt tactgcggat cacatcatgg gttttctcgt
     1801 tggtatgagt gatataacac ggcacctgct ggggatgctg ggacgcattg cccataaacg
     1861 agaataccgg cattgggtta tcgccatgct gttgcgccag cacactaaag tcgatagttc
     1921 gagcatcaat acgcggtggt gtcccggttt tcagacgacc aacgcgcagc ggcagttcac
     1981 gcaaacggcg agaaagcgga atggacggcg gatcaccagc acggccaccg ctgtaattat
     2041 ccagaccgat atgaatttta ccgtcgagga acgtcccaac ggtgagcacg acggctttgg
     2101 cacggaactt cagtcccatt tgggtaacag caccgaccac gcgatcgttt tcgacaataa
     2161 gatcttcaac cgcctgctgg aagatcatca ggttcggttg gttctccagc gccgtacgta
     2221 ccgcctgacg gtagagcaca cgatccgcct gagctcgggt agcgcgaacc gccggtcctt
     2281 tgcttgcgtt tagtatccta aactggatac ccgcttgatc gatcgctttc gccatcagac
     2341 cgccgagtgc atccacttct tttaccagat gtcccttccc aataccgccg atcgccgggt
     2401 tgcagctcat ctgccccaga gtgtcgatat tgtgtgtcaa aagcagagtc tgttgaccca
     2461 tacgcgccgc ggccatcgcg gcctcggtgc ctgcatgacc cccgccaatg atgatgacgt
     2521 caaaaggatc cggataaaac atggtgattg cctcgcataa cgcggtatga aaatggattg
     2581 aagcccgggc cgtggattct actcaacttt gtcggcttga gaaagacctg ggatcctggg
     2641 tattaaaaag aagatctatt tatttagaga tctgttctat tgtgatctct tattaggatc
     2701 gcactgccct gtggataaca aggatccggc ttttaagatc aacaacctgg aaaggatcat
     2761 taactgtgaa tgatcggtga tcctggaccg tataagctgg gatcagaatg aggggttata
     2821 cacaactcaa aaactgaaca accgttgttc cttggataac taccggttga tccaagcttc
     2881 ctgacagagt tatccacagt agatcgcacg atctgtatac ttatttgagt aaattaatcc
     2941 acgatcccag ccattcttct gccggatctt ccggaatgtc gtgatcaaga atgttgatct
     3001 tcagtgtttc gcctgtctgt tttgcaccgg aatttttgag ttctgcctcg agtttatcga
     3061 tagccccaca aaaggtgtca tattcacgac taccaatacc gattgtgcca aagcggaccg
     3121 cagaaagatc gggcttctgt tcctgcaatg cttcatagaa aggagaaagg ttgtccggaa
     3181 tatctccggc accgtgggtg gagctgataa tcagccagat ccccgaggca gataaatctt
     3241 ccaacagcgg accgtgcagc gtttcggtgg taaaacccgc ctcttccagc ttttcagcca
     3301 ggtgttctgc tacatattcg gcaccgccga gggtgctgcc gctgataaga gtgatatctg
     3361 ccataaaccg ccacctttat taagagtggc gtattgtacg ctgtgaacgc gttgggatct
     3421 acctgtggaa aagtatggga ttaaaaaagc cgatcagggc ttgatagtac gcatgatcgg
     3481 gttttgcagg acgatcaatg tctcggtgga ctgaatttca tcaattgttt ggatcttgtt
     3541 gataagtaca tgctggagag cgtcgatcga acggcacatt acttttataa agatgctgta
     3601 gtggcctgtt gtgtaatagg cttcagtgac ttcatcaagg ctttccagct ttgccagcgc
     3661 ggaagggtag tctttggcgc tctttaatat aatgccgata aagcagccta cgtcataacc
     3721 gagctgcttc gggctgacat caatacgcgc cccggtaatg atccccgcct gcttcatttt
     3781 ctctacccga acgtgaatcg tccccggact gacgccaaat tgtttcgcca gttcggcgta
     3841 agcggtgcgc gcattgccca ttaatgcttc caggatgcca cggtccagat tgtcgatcag
     3901 ataattttcc ataggatttt cttatgcaga ttgatgattc attctatttt agccttcttt
     3961 tttaatgaat caaaagtgtg ttaggctttt tattgaatga ttattgcatg tgtgtcggtt
     4021 tttgttgctt aatcataagc aacaggacgc aggagtataa aaaatgaaaa ccgcttacat
     4081 tgccaaacaa cgccaaatta gcttcgtgaa atctcacttt tctcgccaac tggaagaacg
     4141 tctggggctg atcgaagtcc aggcgccgat tcttagccgt gtgggggatg gcacgcagga
     4201 taacttgtcg ggctgtgaaa aagcggtgca ggtaaaagtg aaagctctgc ctgatgccca
     4261 gttcgaagtg gttcattcac tggcgaagtg gaaacgtcag accttagggc aacacgactt
     4321 cagcgcgggc gaagggctgt acacgcacat gaaagccctt cgccccgatg aagagcgtct
     4381 ttctccgttg cactcggtct atgttgacca gtgggactgg gaacgcgtaa tgggcgacgg
     4441 tgagcgtcaa ttctcgactc tgaaaagcac ggtagaggcg atctgggcgg gaattaaagc
     4501 aaccgaagct gcagttagcg aagagtttgg tttggcaccg ttcctgccgg atcagatcca
     4561 cttcgtacac agccaggagt tactgtctcg ttatccggat ctagatgcca aagggcgtga
     4621 gcgggcgatt gcgaaagatc ttggcgcggt attcctcgtc gggattggcg gcaagctgag
     4681 tgatggtcat cgtcacgacg tgcgcgcacc ggattatgat gactggagca ccccgtcaga
     4741 gctgggccat gcgggtctga acggcgatat tctggtatgg aaccctgtac tggaagatgc
     4801 gtttgagctt tcttccatgg ggatccgcgt ggatgccgac acgttgaagc atcagttggc
     4861 gctgaccggt gatgaagatc gtctgcagct ggaatggcat caggcgctgc tgcgcggtga
     4921 aatgccgcag accatcggcg gcggtatcgg ccagtctcgt ttgaccatgc tgctgctgca
     4981 actgccgcat atcggccagg ttcagtgtgg agtatggcca gctgctgttc gcgagagcgt
     5041 cccttctctg ctgtaataat ttatcgccgc cagcgtctga gcaggcggct tcgcatcccg
     5101 gtatcaaagc gccagatatg atcgaaaatg cgcatgatgc cgggtttgcc gtgtgccgac
     5161 atcgccacgg catgaaagcg atgctgatgt acccgctgca gctctttcac tttactcgtc
     5221 acgtcgtcag gcaaccgctg agcgataaaa tcagaaatca ccaccgcatc ggcatcaaac
     5281 cattccctgc tttgcaagcg ttccataatg gcgcgaaaac aactggcaag atcggtgccg
     5341 ccacgaaact gctggcttaa aaaacggatt gcttgttcga tgccttgtgg gcctgaaagc
     5401 tcataacgga cgatctcggt ggaaaatagc ataatatagc agcgccggtt ttcagcgaga
     5461 gcaatgcgca tcaaggccag gcagaacgct ttcgcacact gttcattaaa gccgcccatt
     5521 gagccggaag tatccacaca gacaataaac ggcccgcgcg gctgttcatc gtaatcttta
     5581 tgtaccaccg gacgttcgat cactttttca cgccacgact caccgtgcag gcgataggtg
     5641 agcaactgtt tttccaccag ccgacggtaa aactcatact ccagttccgt tatccctagt
     5701 gtcgccagtt ctggcggcag aagacgtaaa atatcatcgc tttgttgcag accatcaacc
     5761 tgctcaggaa ccgtcgccgg ttcgcgcacc atggtgcgga aggtttccat ctgcgcatcg
     5821 ttgcgcggta ttgatttggc ttcccgagaa cgccccagct gctctgccag gcgtttcagt
     5881 tccggctgtt cgttaagaaa ttcaccgtat ttcacaatca actgatagtc gccacgttta
     5941 agctgaccgg cgctcatatc ccacagacga ccagctgcag tattgttatc tgcgagaatc
     6001 ggttcaagtt gtccgctcag cgtcatgcgt tcctgaactt cactcaacag ttgttcgcgt
     6061 tcttcttcta atagctgttg atttaacgtc gttgcttgca cgatcagact taaacgccaa
     6121 cgctggagaa aaagcgtgtg taacgctgaa gtgatcgtgc tgttagcatc aaccaactgt
     6181 cgggcttgtt ctgcccatgg agaattcaga cgatgcagta agtccaggat ctgtggtagc
     6241 tgcacaataa actgtggcgt ggagaggagc tggctttgct gatagcacat cacctcttcg
     6301 gtgagttccg gcgggactcg ggcatctttc agccgactgc gcagcgcttc acgccagcgg
     6361 ggaacatcat cagtgattgc cgccttcagg cgtgggaatt tttcaaagaa gaccgccagc
     6421 tgcggtgagg ccagcagtgc gatgatcatc tcttcgatca atccctcttc gctgacggcc
     6481 agcatcacat taagcgtatc cagcgttagc attgttgtgc ctggcgaatc tgtgcgccga
     6541 catcctgtag gctggcttca atgcgaccta accagtcgcc agggataaac agacattttt
     6601 gctgttcgct gaataaagcg tgttgcttgc gccagtcgct ttcaagctct tccagttgtt
     6661 gttttatttc accaggcaga ccttcagccg atgaaccggg aagtgccagc gtactgcctt
     6721 gtaaacttac atcgcgtaca acaagatgtt gggcgctatc cacttccaga ttcaatttct
     6781 gggcaaagcc gataccgttc agtttgccgc gaatttcacc acctttactc agccactgtt
     6841 ccagcgcgtt acgctcaaag gagatatgaa ccacttccat atcatgcaat tttaacggtt
     6901 tttgcagcag cagagtcaga gtggaagcag taacgttaac aggaagttga tactgctgac
     6961 gacggctgaa aatgccgccc agacgaatta ccgttaaggc tgttttatcg ctttgttgct
     7021 gctggagttg caggtgacgt tgcacaatcg cgccaaggcg agtcaacatc ccttgctgtt
     7081 gccaggcgtg accggtcatc aatacatcaa tttgttgttg tatcaaattc aggctttgcg
     7141 cgtcatacca caggcaatct ttcagcaaaa tgagatctac cggggcaaca gcactgcgac
     7201 cgctaaaaaa ggcgctggcc tgcaataagc ggatcgcttt tttccagcga cgatccgaga
     7261 cataaggcgc atccggtaat ttatccagtt gctggcgcag cataaaaatc agctcaaata
     7321 catgatcggg cagcgtaatt tcaccaatct ctttctgcca gcgttcatat tcttcatctg
     7381 tgacctgcaa ggcatcagga accggattgt cgttttcatc ctgttgactg gtcagcatgg
     7441 agcggaaatt cgctttatcc tgcactttat ctaaccacag acgaatcagc atgcggtcat
     7501 ataacgcttc cagactgctg tctgcttccg gcagctcgtt ggaggccgcc accagcagac
     7561 gcatcgggat tttttctacg tgtgcaccgt tgcggaactg gcgctcgtta atggcggtga
     7621 gcaaggtatt aagaattgcc gggcccgctt tccagatctc atccagaaag acaatttctg
     7681 cttccggcag gtaaccgctg gttaaacgtt catagcgccc ttcatctttt agcgcctgaa
     7741 tagaaagggg accaaaaact tcttccggcg tggagaagcg ggtcatcaga tattcaaacg
     7801 cgcgggcatt ctgaaaggcg aattttaagc gccgggcgat caaacttttg gcaatacctg
     7861 gcgggccaag gaggaacaca ctttcaccac ttaatgccgc taataaacac aagcggatgg
     7921 cgtggctacg ttcataaagc cccttttcca acgaactgct caggcgggaa attctttccg
     7981 ctaataaatg agggtgagcc ataatgaagt ggcgtccttt cgtcaaaagt tctgcgtaaa
     8041 ttgcgagtat agacgtttct tgctggtggc taaaatagtc tcaaaggggg ggtatttttc
     8101 tttgagccag gttaatgtgg ccgcatttag gagtacgatt ttgccgttaa tcgtgcatac
     8161 tgtgcgcttt tttgtgggcc aagggactaa gcacacattt catatttcaa cgaaagacta
     8221 gtctatgagc actgataata agcaatcatt gcccgcgatt accctcgcgg cgattggagt
     8281 tgtctacggc gatattggta ccagcccgtt atatacactt cgtgaatgtt tgtccggcca
     8341 gtttggtttt ggcgttgaac gcgatgccgt gtttggcttt ttatcgctga tcttctggct
     8401 gctaatcttt gtggtttcca ttaaatatct caccttcgtg atgcgggcag ataacgccgg
     8461 tgaggggggg atcctgacgt tgatgtcgct tgccgggcgt aatacgtcgg cgcgaaccac
     8521 atcaatgctg gtgattatgg ggctaatcgg cggcagcttt ttctatggtg aagtcgtcat
     8581 aacacccgct atttcggtga tgtcagccat tgaaggtctg gaaatcgtcg ccccgcagct
     8641 ggatacctgg atagttcccc tctcaattat cgttctcact ttattattta tgattcaaaa
     8701 acatggcacg gctatggtcg gtaagctgtt tgcgccgatc atgctgacct ggtttttgat
     8761 tctggcagga ctggggttac gtagcattat tgctaacccg gaagtgctgc atgcgctgaa
     8821 tccaatgtgg gcggtgcatt tcttccttga atacaaaacg gtttctttta ttgcattagg
     8881 ggcagtggtg ttgtcgatta cgggggtcga ggcgctgtat gctgatatgg ggcactttgg
     8941 taagttccct attcgcctgg cgtggttcac cgtcgtatta ccttccttga cccttaatta
     9001 cttcggtcag ggagcgctgt tgttaaagaa cccggaagcg attaagaacc cgttcttcct
     9061 gttggcaccg gactgggcgc tgatcccgct gctgatcatc gccgcactgg cgacggtaat
     9121 tgcctcgcag gcggttatct ctggcgtctt ctcattgacg cgtcaggcgg tacgtctggg
     9181 atatttatcg ccgatgcgca ttattcacac ctccgaaatg gagtcagggc aaatctatat
     9241 tccgtttgtg aactggatgc tctatgtcgc ggtcgtgatt gtgattgtca gctttgagca
     9301 ctccagcaac ctggcggcgg cgtacgggat tgcggtgacc ggaaccatgg tgctgacgtc
     9361 tattctctcg actaccgtgg cacgtcagaa ctggcactgg aataagtatt ttgttgcgct
     9421 gatcctgatt gctttccttt gtgtcgatat tccattgttc accgctaacc tcgataaact
     9481 gctctccggc ggctggttgc cattgagcct cggtacggtg atgtttatcg tgatgaccac
     9541 ctggaagagc gagcgtttcc gcttgctgcg gcggatgcat gaacatggta actctctgga
     9601 agcgatgatt gcttcgctgg agaaatcacc gcctgttcgc gtgcccggga ccgcggtgta
     9661 tatgtcgcgt gcaatcaacg tcattccctt tgcgctgatg cataacctta aacataacaa
     9721 ggtattgcat gagcgggtga ttctgttaac tctgcgtacc gaagacgcgc catatgtcca
     9781 taatgtccgt cgggtacaga ttgaacaact gtcgcccact ttctggcgcg tggtggcaag
     9841 ttatggttgg cgagaaacgc caaacgtgga agaagttttc caccgctgcg gtctggaagg
     9901 attaagttgc cggatgatgg aaacctcctt ctttatgtcg catgagtcgt tgatcctcgg
     9961 caaacgcccg tggtatttgc gtctgcgcgg caagctgtac ttgctgctgc aacgtaatgc
    10021 gctgcgtgca ccagatcaat ttgaaattcc gccaaacagg gttatcgaac tgggtactca
    10081 ggtcgaaatc taacgccaga cgcctccttt ctccataagg gggcgttttt gttttcatgg
    10141 ttaatcacca tgtaaaacgt ttcgaggttg atcacatttc cgtaacgtca cgatggtttt
    10201 cccaactcag tcaggattaa actgcgggtc agcgaaacgt ttcgctgatg gagaaaaaaa
    10261 tgaaaaaagg caccgttctt aattctgata tttcatcgat gatctcccgt ctgggacata
    10321 ccgatacgct ggtggtgtgt gatgctggtt tacccatccc caaaagtaca acgcgtatcg
    10381 atatggcatt aacccagggt gtaccttctt ttatgcaggt gctgggcgtc gtcacaaatg
    10441 aaatgcaggt cgaggctgcc attatcgcgg aagagatcaa acaacataat ccgcaactcc
    10501 acgaaacgtt gctcactcac cttgagcagc tgcaaaaaca ccagggaaat accattgaaa
    10561 ttcgttacac cacgcatgaa caattcaaac aacaaaccgc agaaagtcag gcggtaattc
    10621 gcagcggaga atgttctccg tatgcgaata tcattctctg tgctggcgtg acgttctgag
    10681 gccgtcatgg aagcattact tcagcttaaa ggcatcgata aagccttccc gggcgtaaaa
    10741 gccctctcgg gcgcagcgtt aaatgtctat ccgggccgcg tgatggcgct ggtgggcgaa
    10801 aacggcgcgg gtaaatccac catgatgaaa gtgcttactg gtatctatgc tcgcgatgcc
    10861 ggcacgcttt tatggctggg gaaagaaacg acatttaccg ggccgaaatc ttcccaggaa
    10921 gccgggattg ggattatcca tcaggaactg aacctgatcc cgcagttgac cattgccgaa
    10981 aacattttcc tcggtcgtga gtttgttaat cgctttggca aaattgactg gaaaaccatg
    11041 tatgccgaag cggataaatt gctggctaaa cttaacctgc gctttaaaag cgacaagctg
    11101 gtgggcgatc tttccatcgg tgaccagcaa atggttgaaa tcgccaaagt gctgagcttt
    11161 gagtcgaaag tcatcattat ggatgaaccg accgatgcgc tgaccgatac cgaaaccgaa
    11221 tccctgttcc gcgtcatccg cgaactaaaa tcgcaaggcc gcggtattgt ctatatctcc
    11281 caccgcatga aagaaatctt cgagatttgc gatgacgtta ccgtttttcg tgacgggcaa
    11341 tttattgctg agcgcgaagt ggcatcactg accgaagatt cgctgattga gatgatggtg
    11401 ggtcgcaagc tggaagatca atatccgcac ctggacaaag cgccgggaga tatccgcctg
    11461 aaagtcgata atctctgcgg acctggcgtt aacgatgtct cttttacttt acgcaaaggc
    11521 gaaattcttg gcgtctctgg tttgatgggc gcaggtcgta ccgaactgat gaaagtgctc
    11581 tacggcgcac taccgcgcac cagcggttac gtcaccctgg atgggcatga agtcgttacc
    11641 cgttcaccgc aggatggcct ggcaaacggc attgtgtata tctccgaaga ccgtaaacgt
    11701 gacggtttag tgttgggcat gtcagtaaaa gagaacatgt cgctgacagc gctgcgctac
    11761 ttcagccgcg ctggcggcag tttgaagcat gccgatgaac agcaggctgt gagtgatttc
    11821 attcgtctgt ttaatgtgaa aacaccgtcg atggaacagg caattggtct gctttccggt
    11881 ggcaatcagc aaaaagtggc gattgcccgc ggtctgatga cacgccccaa agtgttgatc
    11941 cttgatgaac ctacccgtgg cgtagatgtc ggcgcgaaaa aagagatcta tcaactgatt
    12001 aaccagttca aagccgatgg cttgagcatc attctggtgt catcggagat gccagaagta
    12061 ttaggcatga gcgatcgcat catcgtcatg catgaagggc atctcagcgg ggaatttact
    12121 cgtgagcagg ccacccagga agtgttaatg gctgccgctg tgggcaagct taatcgcgtg
    12181 aatcaggagt aaaaaaatga caacccagac tgtctctggt cgccgttatt tcacgaaagc
    12241 gtggctgatg gagcagaaat cgcttatcgc tctgctggtg ctgatcgcga ttgtctcgac
    12301 gttaagcccg aactttttca ccatcaataa cttattcaat attctccagc aaacctcggt
    12361 gaacgccatt atggcggtcg ggatgacgct ggtgatcctg acgtcgggca tcgacttgtc
    12421 tgtaggttct ctgttggcgc taaccggcgc agttgctgca tctatcgtcg gcattgaagt
    12481 caatgcgctg gtggctgtcg ctgctgctct cgcgttaggt gccgcaattg gtgcggtaac
    12541 cggggtgatt gtagcgaaag gtcgcgttca ggcgtttatc gctacgctgg ttatgatgct
    12601 tttactgcgc ggcgtgacca tggtttatac caacggtagc ccagtgaata ccggctttac
    12661 tgagaacgcc gatctgtttg gctggtttgg tattggtcgt ccgctgggcg taccgacgcc
    12721 agtctggatc atggggattg tcttcctcgc ggcctggtac atgctgcatc acacgcgtct
    12781 ggggcgttac atctacgcgc tgggcggcaa cgaagcggca acgcgtcttt ctggtatcaa
    12841 cgtcaataaa atcaaaatca tcgtctattc tctttgtggt ctgctggcat cgctggccgg
    12901 gatcattgaa gtggcgcgtc tctcctccgc acaacccacg gcggggactg gctatgagct
    12961 ggatgctatt gctgcggtgg ttctgggcgg tacgagtctg gcgggcggaa aaggtcgcat
    13021 tgttgggacg ttgatcggcg cattaattct tggcttcctt aataatggat tgaatttgtt
    13081 aggtgtttcc tcctattacc agatgatcgt caaagcggtg gtgattttgc tggcggtgct
    13141 ggtagacaac aaaaagcagt aataacgact acaggacatc ttgaatatga acatgaaaaa
    13201 actggctacc ctggtttccg ctgttgcgct aagcgccacc gtcagtgcga atgcgatggc
    13261 aaaagacacc atcgcgctgg tggtctccac gcttaacaac ccgttctttg tatcgctgaa
    13321 agatggcgcg cagaaagagg cggataagct tggctataac ctggtggtac tggactccca
    13381 gaacaacccg gcgaaagagc tggcgaacgt gcaggactta accgttcgcg gcaccaaaat
    13441 tctgctgatt aacccgaccg actccgacgc agtaggtaat gctgtgaaga tggctaacca
    13501 ggcgaacatc ccggttatca ctcttgaccg ccaggcaacg aaaggtgaag tggtgagcca
    13561 cattgcttct gataacgtac tgggtggcaa aatcgccggt gattacatcg cgaagaaagc
    13621 gggtgaaggt gccaaagtta tcgagctgca aggcattgct ggtacatccg cagcccgtga
    13681 acgtggcgaa ggcttccagc aggccgttgc tgctcacaag tttaatgttc ttgccagcca
    13741 gccagcagat tttgatcgca ctaaaggttt gaacgtaatg cagaacctgt tgaccgctca
    13801 tccggatgtt caggctgtat tcgcgcagaa tgatgaaatg gcgctgggcg cgctgcgcgc
    13861 actgcaaact gccggtaaat cggatgtgat ggtcgtcgga tttgacggta caccggatgg
    13921 cgaaaaagcg gtgaatgatg gcaaactagc agcgactatc gctcagctac ccgatcagat
    13981 tggcgcgaaa ggcgtcgaaa ccgcagataa agtgctgaaa ggcgagaaag ttcaggctaa
    14041 gtatccggtt gatctgaaac tggttgttaa gcagtagttt taatcaggtt gtatgacctg
    14101 atggtgacat aaatacgtca tcgacagatg aacgtgtaat ataaagaaaa gcagggcacg
    14161 cgccacccta acacggtggc gcattttatg gacatcccga atatgcaaaa cgcaggcagc
    14221 ctcgttgttc ttggcagcat taatgctgac cacattctta atcttcaatc ttttcctact
    14281 ccaggcgaaa ccgtaaccgg taaccactat caggttgcat ttggcggcaa aggcgcgaat
    14341 caggctgtgg ctgctgggcg tagcggtgcg aatatcgcgt ttattgcctg tacgggtgat
    14401 gacagcattg gtgagagcgt tcgccagcag ctcgccactg ataacattga tattactccg
    14461 gtcagcgtga tcaaaggcga atcaacaggt gtggcgctga tttttgttaa tggcgaaggt
    14521 gagaatgtca tcggtattca tgccggcgct aatgctgccc tttccccggc gctggtggaa
    14581 gcgcaacgtg agcgtattgc caacgcgtca gcattattaa tgcagctgga atcaccactc
    14641 gaaagtgtga tggcagcggc gaaaatcgcc catcaaaata agactatcgt tgcgcttaac
    14701 ccggctccgg ctcgcgaact tcctgacgaa ctgctggcgc tggtggacat tattacgcca
    14761 aacgaaacgg aagcagaaaa gctcaccggt attcgtgttg aaaatgatga agatgcagcg
    14821 aaggcggcgc aggtactgca tgaaaaaggt atccgtactg tactgattac tttaggaagt
    14881 cgtggtgtat gggctagcgt gaatggtgaa ggtcagcgcg ttcctggatt ccgggtgcag
    14941 gctgtcgata ccattgctgc cggagatacc tttaacggcg cgttaatcac ggcgttgctg
    15001 gaagaaaaac cattgccaga ggcgattcgg tttgcccatg ctgccgctgc gattgccgta
    15061 acacgtaaag gcgcacaacc ttccgtaccg tggcgtgaag agatcgacgc atttttagac
    15121 aggcagaggt gacgcttggc tacaatgaaa gatgttgccc gcctggcggg cgtttctacc
    15181 tcaacagttt ctcacgttat caataaagat cgcttcgtca gtgaagcgat taccgccaaa
    15241 gttgaagcgg cgattaaaga actcaattac gcgccatcag ccctggcgcg tagcctcaaa
    15301 ctcaatcaaa cacataccat tggcatgttg atcactgcca gtaccaatcc tttctattca
    15361 gaactggtgc gtggcgttga acgcagctgc ttcgaacgcg gttatagtct cgtcctttgc
    15421 aataccgaag gcgatgaaca gcggatgaat cgcaatctgg aaacgctgat gcaaaaacgc
    15481 gttgatggct tgctgttact gtgcaccgaa acgcatcaac cttcgcgtga aatcatgcaa
    15541 cgttatccga cagtgcctac tgtgatgatg gactgggctc cgttcgatgg cgacagcgat
    15601 cttattcagg ataactcgtt gctgggcgga gacttagcaa cgcaatatct gatcgataaa
    15661 ggtcataccc gtatcgcctg tattaccggt ccgctggata aaactccggc gcgcctgcgg
    15721 ttggaaggtt atcgggcggc gatgaaacgt gcgggtctca gcattcctga tggctatgaa
    15781 gtcactggtg attttgaatt taacggcggg tttgacgcca tgcgccaact gttatcacat
    15841 ccgctgcgtc ctcaggccgt ctttaccgga aatgacgcta tggctgttgg cgtttaccag
    15901 gcgttatatc aggcagagtt acaggttccg caggatatcg cggtgattgg ctatgacgat
    15961 atcgaactgg caagctttat gacgccacca ttaaccacta tccaccaacc gaaagatgaa
    16021 ctgggggagc tggcgattga tgtactcatc catcggataa cccagccgac ccttcagcaa
    16081 caacgattac aacttactcc gattctgatg gaacgcggtt cggcttagat ttacgctgtc
    16141 ttttgatcaa attattacca tcggttgttt tcagaagcat gaacattgct gctgaagcaa
    16201 cagtaataat gcccatcgtg ataaacgtat agtggaattg ttcgacagtc gttgtgcctt
    16261 ccatcccttc ataaacgcga aggacggccg cacttacagc aacgcctaaa ctaatcgaca
    16321 gttgctgcgt gaccgccaga acactgttac cgctgctggc gttgtcatcg gtcagatcgg
    16381 caagtgtgat ggtattcatc gcggtaaatt gcgtcgacat agccatccct aatataaaca
    16441 acggcaagat cagcatccat atcgccattg ccggtgattg caaagagaac tgagcgatca
    16501 ttagcccaat aatcaccgtg atccccacta acgtatggcg atagcccaga cgacgtaaga
    16561 cttgggtaac catcgatttt gcaataatgg aacctaacgc tgtcggtgcc atcatacagc
    16621 cggcaataaa cgcctgataa ccaaatccta cctgtaacat caatggcata aggaacggta
    16681 cacaaccggt ccccagacgg gttgcaatat tgcctacgat accgatcgag aaagtgcggg
    16741 ttttaaataa atctaatgaa attaatgggt ttggcgtgtg tcgcgcatgg agaatataga
    16801 gaagcagtaa cccgatgctg gtgacaatta ccgtcaaggc aatccagctg gcgacaatct
    16861 tttccccgaa tagctctatt ccgcttgaga agagaacaag gctgaggcca aacagcaaaa
    16921 agccagtgat atcgaatctg cgtcgtgcgg tggtgaaatt gggcatatgt ttgcgcgcgt
    16981 aaagaaggcc cgcaatacct atggggatat tgattaaaaa tatccagtgc caggttgccc
    17041 aggtgaccag cacgccgcca agaacggggc ctaaaattgg ccccaccaga cccggcatgg
    17101 cgacaaaatt caatactgga agaagttcat tacgaggata agcgcgcagt aaggccagcc
    17161 gagcaacagg catcatcatt gcgccgccta tcccctgaat aacccggaag acaaccagct
    17221 gtggtagcga attagaaagt gcgcaggcca gagaacccaa tgtgaacaga ctcactgcaa
    17281 gggtaaaaat gcgacgcgta ccgaagcgat cagctagcca tccgcttacc ggaataagca
    17341 tcgccaccgt cagcgtataa ctgatgatgg ctgattgcat cgcgagagga gaacgattaa
    17401 ggctatgagc gattgcgggt aaggcggtat tcagaatagt ggcatcaagt gcctgcatga
    17461 agaaggccat cgccgcgatc cacggcaaac ccgccatact gcgattcttt ttatcgctca
    17521 ttcaatgtcc tgttatcggg ttgtcactta tcaggtgagc gtagcagcgc ctgacaagct
    17581 ttaaatgccg cgtcgccatc gctttggaca atcgcatcga caatcgcctg gtgcagatcc
    17641 agctttatca ctgtgtcgct ggtaattgac gtgaagtaag tgtgataaac cgaatggaat
    17701 agcgaggcga atgaggtcaa aaacggattg gcgctcattt catagatatg ctcatgccag
    17761 gccatatcga cttcgatcca gcgttcacgg cgaaagttct cttttaatgc cgccatttcg
    17821 gccattaacg tattgagatg cgccttctgt tccgcggtgc caaccgttgc agccagtagg
    17881 caagcttgcg gctccagaca gatacgcata accagaaagt gatcgatgac ctgatgaaag
    17941 ttctcttctg tcatccacca ggtaagcaat tcctgatcaa gaaaattcca gtttgattgt
    18001 ggcatgaccc gggtaccaat tcgcggtcgc ggtaaaacca tcccttttgc cgttaacgtt
    18061 ttgaccgctt cgcgtaccgc tgtacgactc actccaaatt gctcgcccag ctcaatctca
    18121 ccaggcaaaa tggtgccggg ttcatattca ccttttaaga tgcgttgcgc cagcttctca
    18181 gccagaacat acgaaaggtt tttctgtgca gctaactgtt gtgcgcttaa aggcattact
    18241 aatcttcctt tttcttttta ttcctcctta gtatgccacc aggaagtgtg attacggttg
    18301 caaaaacggc aaattgcttg ttttatggca cattaacggg ggttttgctg aaaaaatgcg
    18361 cggtcagaaa attattttaa atttcctctt gtcaggccgg aataactccc tataatgcgc
    18421 caccactgac acggaacaac ggcaaacacg ttgccgggtc agcggggttc tcctgagaat
//
LOCUS       DAPGWB010000088        18349 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.088, whole genome shotgun sequence.
ACCESSION   DAPGWB010000088 DAPGWB010000000
VERSION     DAPGWB010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18349)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18349)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18349
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.088"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..581
                     /locus_tag="RHX79_002889"
                     /pseudo
     CDS             1..581
                     /locus_tag="RHX79_002889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416774.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
     gene            684..1187
                     /locus_tag="RHX79_002890"
     CDS             684..1187
                     /locus_tag="RHX79_002890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbM family protein"
                     /protein_id="HDV2198041.1"
                     /translation="MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDK
                     RWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLES
                     LDRSELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNH
                     ALTVIVG"
     gene            complement(1254..2711)
                     /gene="nuoN"
                     /locus_tag="RHX79_002891"
     CDS             complement(1254..2711)
                     /gene="nuoN"
                     /locus_tag="RHX79_002891"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HDV2198042.1"
                     /translation="MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIG
                     LNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNK
                     DEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYT
                     ILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKL
                     SLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAII
                     AFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYL
                     FSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGF
                     IGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQY
                     SAGGIVVLISALLVLVLGVWPQPLISIVRLAMPLM"
     gene            complement(2718..4247)
                     /gene="nuoM"
                     /locus_tag="RHX79_002892"
     CDS             complement(2718..4247)
                     /gene="nuoM"
                     /locus_tag="RHX79_002892"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HDV2198043.1"
                     /translation="MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSL
                     QLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAV
                     LCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK
                     ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG
                     VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL
                     PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS
                     QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA
                     VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS
                     QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR
                     P"
     gene            complement(4411..6252)
                     /gene="nuoL"
                     /locus_tag="RHX79_002893"
     CDS             complement(4411..6252)
                     /gene="nuoL"
                     /locus_tag="RHX79_002893"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HDV2198044.1"
                     /translation="MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALV
                     TAFIGVDFFANGEQSYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMY
                     ASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTD
                     PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWA
                     TLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT
                     PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFH
                     LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLV
                     TAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG
                     VTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHGSMLTLEITSGVVAVVGILLA
                     AWLWLGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLN
                     SMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR"
     gene            complement(6249..6551)
                     /gene="nuoK"
                     /locus_tag="RHX79_002894"
     CDS             complement(6249..6551)
                     /gene="nuoK"
                     /locus_tag="RHX79_002894"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HDV2198045.1"
                     /translation="MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL
                     AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG"
     gene            complement(6548..7102)
                     /gene="nuoJ"
                     /locus_tag="RHX79_002895"
     CDS             complement(6548..7102)
                     /gene="nuoJ"
                     /locus_tag="RHX79_002895"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HDV2198046.1"
                     /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFF
                     SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAI
                     MLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
                     EERAGEVLSNRKDDSAKRKTEEHA"
     gene            complement(7114..7656)
                     /gene="nuoI"
                     /locus_tag="RHX79_002896"
     CDS             complement(7114..7656)
                     /gene="nuoI"
                     /locus_tag="RHX79_002896"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015959823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HDV2198047.1"
                     /translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY
                     RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC
                     GLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG
                     KDKGEAENEAKPIDVKSLLP"
     gene            complement(7671..8648)
                     /gene="nuoH"
                     /locus_tag="RHX79_002897"
     CDS             complement(7671..8648)
                     /gene="nuoH"
                     /locus_tag="RHX79_002897"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015875065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HDV2198048.1"
                     /translation="MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQ
                     NRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVP
                     VSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL
                     GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAE
                     QELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTA
                     FFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ"
     gene            complement(8645..11371)
                     /gene="nuoG"
                     /locus_tag="RHX79_002898"
     CDS             complement(8645..11371)
                     /gene="nuoG"
                     /locus_tag="RHX79_002898"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HDV2198049.1"
                     /translation="MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGA
                     CRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHD
                     CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRY
                     YKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRK
                     WDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK
                     DRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGE
                     ENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALA
                     VRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAP
                     VEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSIE
                     VIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVV
                     LENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNE
                     GRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPE
                     LAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEG
                     NNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTS
                     VPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGT
                     HVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ"
     gene            complement(11424..12761)
                     /gene="nuoF"
                     /locus_tag="RHX79_002899"
     CDS             complement(11424..12761)
                     /gene="nuoF"
                     /locus_tag="RHX79_002899"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HDV2198050.1"
                     /translation="MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG
                     LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR
                     LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI
                     MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNN
                     VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED
                     YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN
                     MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG
                     PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW"
     gene            complement(12758..13258)
                     /gene="nuoE"
                     /locus_tag="RHX79_002900"
     CDS             complement(12758..13258)
                     /gene="nuoE"
                     /locus_tag="RHX79_002900"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HDV2198051.1"
                     /translation="MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQ
                     KQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGY
                     QGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPE
                     LLERYK"
     gene            complement(13261..15063)
                     /gene="nuoC"
                     /locus_tag="RHX79_002901"
     CDS             complement(13261..15063)
                     /gene="nuoC"
                     /locus_tag="RHX79_002901"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C/D"
                     /protein_id="HDV2198052.1"
                     /translation="MVNNMTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATR
                     TGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHL
                     ISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM
                     PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL
                     NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE
                     YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT
                     PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA
                     SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF
                     DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT
                     LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSY
                     AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR"
     gene            complement(15157..15819)
                     /gene="nuoB"
                     /locus_tag="RHX79_002902"
     CDS             complement(15157..15819)
                     /gene="nuoB"
                     /locus_tag="RHX79_002902"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HDV2198053.1"
                     /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLND
                     MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC
                     FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP
                     RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD
                     EI"
     gene            complement(15835..16278)
                     /gene="nuoA"
                     /locus_tag="RHX79_002903"
     CDS             complement(15835..16278)
                     /gene="nuoA"
                     /locus_tag="RHX79_002903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoA"
                     /protein_id="HDV2198054.1"
                     /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR
                     SKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE
                     AAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR"
     gene            complement(16908..17846)
                     /gene="lrhA"
                     /locus_tag="RHX79_002904"
     CDS             complement(16908..17846)
                     /gene="lrhA"
                     /locus_tag="RHX79_002904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LrhA"
                     /protein_id="HDV2198055.1"
                     /translation="MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ
                     QMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT
                     IGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA
                     FKALNLRTSPTHWYCAAEYVLQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYV
                     ASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL
                     AQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE"
BASE COUNT         4588 a         5089 c         4721 g         3951 t
ORIGIN      
        1 ttatttttac caaccctggg tcactgcatt atcgccaacg ccccgacacg tcagtcctga
       61 gcaattagaa aaaacagttc gttatcttac acaaactgtg catccacgta atgccgacaa
      121 tattgataat ctgaataggt ccgtagagta tataaaagag ttctttgtca gtagcggtgc
      181 cagagttacc gcgcagggcg tccccgattg gctattacga ctctgcgcct ggtagccagg
      241 attaccctta cccgcaatgt cctggcttta tcccgatcgg ggggacttta ttgcctggtc
      301 ggcagaatac aggatatcaa cgccgttcgt caggtaaaaa cggcattgtt atcatcccgg
      361 gatttatctg tttattctat gaatgcccca tggtttattc ccggtattga tttctctgac
      421 cacctgaatt attggcaaca cgatattccc gccgtaatga ttactgacac cgctttttat
      481 cgtaataaac aataccactt gcccggtgat acagcagaca gattgaatta tcagaaaatg
      541 gctcagatgg tgttataacc ttgttacaca acagtaaata ataaaaattt ctcgaggcgg
      601 gtccagaaac agcgacatgt acattttatt ttccctcgtc tgttttaaga tgcgaaacat
      661 aaaattcaat ggaggaaaaa taaatgggaa tgattggtta ttttgcagaa attgactcag
      721 aaaagattaa ccaactgctt gagtctactg aaaaaccttt gatggataat atacatgaca
      781 cgctttcagg attacgccga ctggatattg ataaacgctg ggatttttta cactttgggc
      841 tgacaggcac ctctgctttt gatcccgcga agaatgatcc gctgagtcgt gccgtgcttg
      901 gtgaacacag cctcgaagat ggcatagatg gcttcctggg attgacctgg aatcaggagt
      961 tagccgcgac aatcgaccga ctggaatcac tggatcgaag tgagctgcgt aaacagtttt
     1021 ccattaagcg actcaatgaa atggagattt atccgggagt gaccttttca gaagagttag
     1081 aggggcaact ctttgcttcg atcatgcttg atatggaaaa gctgattagc gcgtatcgac
     1141 gtatgctgcg acaagggaat catgcgctga cggttattgt tgggtgatgg tgtcagggca
     1201 ccaaaaaaaa ccgccgaaca tgtcggcggc tttctgactt acaaactgat agcttacatc
     1261 agcggcattg ctaaccgcac aatgctaatc agcggttgtg gccatacacc cagcaccagt
     1321 accaacagtg cagagatcag caccacgata ccgcctgcgc tgtactgcca gtttgacggt
     1381 gcatcgcgac ccggttgttc cggggcgtgc aggtacaggc tcaccgccac gcgcaggtag
     1441 tagtaaaggc cgattgccga accgacaacc acggcgccca ccagccacca caagtgtgcc
     1501 tggacaccga ccgccagcac gtagaactta ccaataaagc ccagcgtcat cggaataccg
     1561 gccagagaca gcatcatcac cgtcatcacc gccgcgagga tcgggcgatg ccagaacaga
     1621 ccgcggtaag agaacaggga atcagcatcc gggccacggt acgggctgga catcaggctg
     1681 accacgccga acgcgccgag gctgctgaac agataaccgg ccaggtaaac tcctaccgct
     1741 tccatcgaca tctcgcccgt ttgcagcgca atcagcgcca ccagcagata gccgaggtga
     1801 gagatagatg agtaaccgag cagacgtttg atattggtct ggctcagcgc catcaggtta
     1861 ccgaagatga tagaggcaaa ggcgataatc gccagcacta cccgaatcgc ttcgctgtca
     1921 cccaccggtg cgtagaggaa cagacgcatc accacaccga agatagcgat tttgctcgcc
     1981 gtcgccagga aagtggaaac cggcgcaggc gcgccctggt atacgtctgg cgtccacagg
     2041 tggaacggca ccagagagag tttgaagcca aggccaacaa tcatcaggcc gaaacctgcc
     2101 agcaacagcg gctcgttgag cataccgtcg ccgaggtttt tacccagcgc gacaaacgac
     2161 aggtcgccag actgcgcata caccagcgcc ataccgaaca gcaggaaaga agacgctgcg
     2221 gcagaaagga tagtgtattt gatactggct tccagcgaac gtttctggcg gaaagcgtaa
     2281 ccgaccaggc caaacagcgg caaagagatc agttcgatac cgaggaacag agacgccaga
     2341 tggttggcat tcgccagcag gatcccgccc agcgcggcaa ttaacaccaa caggtagaac
     2401 tcatccttgt tgtcgttata gccttcaagc cacgggtagg cgaaagtaca ggtggcgagg
     2461 ctcgccaaca ataccagccc ggtgtaaagc atggcgaaac catcaacgcg catcagcggc
     2521 gtaacgtcca tagcgcccgc ctggccaaca aaccagagcg aaaccagcgc cgcgttaagc
     2581 ccaataaccg agagcgtagc gttgaggaaa tgattgcgtc gccacgcaat ggagagcatc
     2641 acaaccacca ccgtcaagcc gacgatcagc aacggtagca gtgcgatcag gttttgtgga
     2701 gttattgtca tggcgattta cggccttgta gtagtaacgg aattaacaaa ccactgctgg
     2761 atattgccaa tcgcggagtg cgaggtatcc agaatcggct gcggatagaa gcccagcagt
     2821 accagcagca ccaccagcaa caggatcata aacagctcac gcagcgacat ccctggcagt
     2881 tcctggctgg caatctggct tttcgcttta ccgaagtaag cgcgatgtaa catcgccagc
     2941 gaataaacag atgcaaagac cagcccaaag gtagagataa cggtaatcac cgggacaacc
     3001 tggaagctgc cgaacagaat cataaattcg ccgacgaagt taccggtgcc aggcatccca
     3061 agcgttgcca ccgcaaagaa cagcgacagt gctggcagcc atttcatctt gctccacaga
     3121 ccgcccatca tgcgcatgtc gcgggtatgg atacgttcat aaagctgacc acaaagaata
     3181 aacagacccg ccgccgacaa accgtgcgca atcatctgga ttaccgcgcc ctggtaggcc
     3241 aactggctgc cggtgtagat agcaatcagc acgaagccca tgtgggaaac cgaggtgtag
     3301 gcgatcagac gtttgatatc ggtctgggcg aaggccatcc acgcaccgta gaagatgccg
     3361 ataacaccca gccacatagc aattggcgcg aactctgccg acgcgttcgg gaacagcggc
     3421 agggagaaac gcagcaaacc gtaagcggca gttttcagca agatccccgc gaggtcaacg
     3481 gaaccggcgg tcggagcctg agagtgcgca tccggtagcc agccatgcag cggaaccacc
     3541 ggcattttga ctgcgaaggc gatgaagaag cccagcatta acaggtattc cacaccactg
     3601 gacattggcg tattcagcag ctcttcatag ttgaaggtcc agacgccggt cgcattgtag
     3661 tgaacaaaaa ccagcgccag gatggcaatc aacatcacca gaccactcgc ctgggtgtaa
     3721 atgaagaact tggttgccgc cgtgatacgc gttttaccgt cagaggcttt atgcccccac
     3781 agtgcgatca ggaagtacat cggcaccagc atcatttccc agaagaagaa gaacaggaac
     3841 atgtcgatgg caaggaacac gccgataacg ccgcccagga tccacatcag gttgaggtgg
     3901 aagaagccct gatatttttc gatctctttc cacgaacata gtaccgccag cacaccgagc
     3961 agaccggtca gcacgaccat cagcagcgac agcccgtcaa tggcgagatg aatagagata
     4021 ccaaaacgcg ggatccacgg catgtcgaat tcagactgcc actgcggaat tccggcggat
     4081 tgcgtcagtg aataaccgcc ctgcaaccac agttgcagcg acagcgccag cgtcaatccc
     4141 atggtgatca gcgcgatcca gcgtggcacc ttgacgccaa agcgttcggt ctgccagcac
     4201 aggaagccgc caataaaggg aattaatatt agccagggta gtaacatggc gatctttatt
     4261 ccttgtaaaa gtcccgtcag gaccggattt tcaacgaatt ctcacgacag aaaattctct
     4321 tcggactggg ggtagtgtcg gatgcaccgc gaaggcggct tatccgacct acgttcttat
     4381 atgcccaggg gcaatcccac aatccttaac tcaacgcagt accatcaaca gtgccagcac
     4441 cacgaccgca ccgatgctca tggatgccac ataccagcgc agatagccgt tctcacttaa
     4501 cagcagacct ttacctgcaa agcgggaaag gacagccggg atgttcatca ttgagttcag
     4561 cggatcgcgt ttcagcaacc aggcaatacc caggaacggc ttgacgaaca ctttgtcata
     4621 cagccagtca aatccccagg cgttgtacca ccaggtgccc agcagacggc ccggcgcact
     4681 gttggcgatg gaggtcacca gagtacgttt acccagccac agccaggctg ccagcagaat
     4741 gccgaccacc gcgaccacgc cagaggtaat ttccagggtc aacatgctgc cgtgcgccag
     4801 ttccgtcgtt tgcggaagca cgccctgcag cggcggtaca atcagtgcgc caacgaaggt
     4861 ggaaaggatc agcagcacaa tcagcggcag gctgtgagtt acccctttca cggcgtgagc
     4921 gtgaatttgt tcttttccgt ggaagacgat gaaaatcata cggaaggtgt agagcgaggt
     4981 cataaacgca ccgaccagac ctgccaccat cagattgata tgaccattcg ccatcgcacc
     5041 cgcgaggatc tcatccttac tgaagaagcc cgcagtgacc agcggtagtg ccgacagtgc
     5101 tgcgccgccc accaggaagc agagataaac cagcggaata gatttacgca gaccgcccat
     5161 cttgaagatg ttctgttcgt gatggcaggc cagaatgacg gaaccggatg ccaggaacag
     5221 cagcgcttta aagaacgcgt gagtcatcaa gtggaaaatc gccgcatccc atgcctgcac
     5281 gccaagcgcg aggaacatgt agccaatctg gctcatggta gagtaagcga gaacacgttt
     5341 gatgtcggtc tgtaccagcg cggcaaaacc ggccagcagc agcgtaaccg ccccgacaat
     5401 acccaccaga tgcagaactt ccggcgtcat caggaacagg ccgtgggtac gggcgatcag
     5461 gtagacaccc gcggttacca tcgttgcggc gtggatcagc gcggagacag gcgtcgggcc
     5521 cgccatcgcg tcagcaagcc atgtctgcaa cggcaactgc gcagatttac cgaccgcacc
     5581 gcccagcagc atcagcgtcg cccacatcag catgttattg ccgtcagcaa agtgcgctgg
     5641 tgccagttcc accatttcgc ggaagttcag ggtgcccagt tcgttgtaaa gaatgaacag
     5701 tgcgaaagcg aggaaaacgt cacccacacg ggtcacgacg aacgctttca ttgccgctgc
     5761 gccattcttc ggatcggtgt aatagaaacc gatcagcaga taggagcaca ggcccacgcc
     5821 ttcccagccg aggtacatca gcagcaggtt atcggcgaga accagaacta ccatgctggc
     5881 gatgaacagg ttggtgtagg cgaagaagcg agagtagccc tcttcaccgc gcatgtacca
     5941 ggaggcgtac atgtgaataa ggaaacccac accagtgacc accgagagca tggtcagcga
     6001 caggccgtcc agcaccaggt taaaaccgat gttaaagtcg cctaccgaca tccacgtcca
     6061 cagcggctgg ctgtatgact gctcgccgtt agcgaagaaa tcaacgccga taaaggcggt
     6121 taccagcgcc gccaggccca cagagccaac gccgacgatc gccgaaacgt tttcagacca
     6181 gcgcccacgg gagaacgcca gcaggacgaa gccaatcaat ggcaaaataa tggttaaggc
     6241 aagcatgttc atccgcgcat ctcacttact gaatcgatgt tcaggttctg gcgacgacgg
     6301 tgaagttgca gcagcagcgc aaggccgata ctcgcttctg ccgccgcgag gctgatggcg
     6361 agaatgtaca tcacctgacc gtcggtctga ccccagtagc ttccggcgac cacaaaggcc
     6421 agcgcggagg cgttaatcat gatttccaga ccaatcagca taaacagcag attgcgacgg
     6481 ataaccagac cggttaagcc aagaacgaat aagattgccg cgaggatcag tccatgttgt
     6541 aaggggatca tgcgtgctcc tccgtttttc ttttcgcgct gtcgtcttta cgattgctca
     6601 gcacttcacc cgcacgctct tcacgaccga cgtggaaggc cacaaccaga cccgcgagca
     6661 gcagcataga agccagttcc accgccagta cgtaaggccc gaacagcgta atacccactg
     6721 ctttagcact gattggcgta ccgtcgatac cctgatcatt aacaccaagg atggcgtaaa
     6781 caatcaccac cagcatgatg gccgacaaaa ttgccggacc aatccacacc tgcggtttca
     6841 gccactggcg ttcctgttcg atttctgaac cgcccaggtt gagcatcatc accacgaaca
     6901 cgaacagcac cataatggca cccgcgtaga cgataatttc cagcgcaccg gcgaagtaag
     6961 cgcccagtga gaagaacacc ccggaaatcg ccagcagcga aataatcagg tacagcagtg
     7021 cgtgtaccgg attggtatgg gtgatcactc gcaaggtcgc aagtatggct atcaggccac
     7081 agatataaaa agcgaactcc attgcccctc tccttacggt aacaggctct tgacgtcgat
     7141 aggcttggct tcgttctctg cttcgccctt atctttgccg tcgattgcca tacctgccat
     7201 ccggtagaag ttatattccg ggtatttgcc cggaccggag atcagcagat cctctttttc
     7261 gtaaaccaga tcctggcgct tgtattcccc catttcgaaa tccggggtta actgaatcgc
     7321 cgtggtcgga caggcttctt cgcacagacc acagaaaatg cagcgtgaga agttgatgcg
     7381 gaaaaattcc gggtaccagc gaccgtcttt ggtttctgct ttttgcagcg agatacagcc
     7441 gaccgggcag gctaccgcgc agaggttaca ggctacgcaa cgctcttcgc cgtccgggtc
     7501 gcgggtcaga acgatacgac cacgataacg gggcggcaga tagaccggct cttccgggta
     7561 cattcgcgtt tcgcgtttgg cgaacgcgtg caggccgatc atccagatac tacgaacctg
     7621 ggtgccgaaa cctactaaca attcttttaa ggtcatggtc ttattgcccc ttattgcgcc
     7681 tgccagagaa tgacagccgc cgttaccagc aagttgatca gcgtcagcgg caggcagatt
     7741 ttccagccga aggacattac ctggtcataa cgcggacgcg gtaacgacgc acgaatcaaa
     7801 atgaacatca tcataaagaa cgcggttttc agcgcgaacc agatgaatgg cggtaacaac
     7861 gggccttgcc agccaccgaa gaacagcgtc accatcaatg cagagatggt cacaatcccg
     7921 atgtactcac ccacgaagaa cagaccgaac ttcataccgg aatattcaat gtggtaacca
     7981 tccgccagtt cctgctcggc ttccggctgg tcaaacgggt gacggtgaca taccgccacg
     8041 cccgcgatgg caaaggtaat aaaaccaaag aattgcggga taacgttcca cacatgcgcc
     8101 tggctgttga cgatgtcggt catgttgaat gaaccggcct gcgccaccac gcccatcagg
     8161 gaaagcccga ggaacacttc gtagctcagg gtctgcgcag aagcacgcat cgcacccagc
     8221 aacgagtatt tgttgttact tgaccagccc gcaaacagca ccgcgtaaac cgccagacct
     8281 gccatcatca ggaagaacaa aatcccgatg ttcaggtcgg caaccaccca acccggactg
     8341 actggcacaa tcgcaaaggc cagcagcagc gaggtaaagg caatcatcgg tgccagggta
     8401 aagatgacgc gatccgagaa tttcgggatc cagtcttctt taaagaacat tttgatcatg
     8461 tccgcaacca gctggagcga accgccccag ccaacacggt taggtccgta acggttctgg
     8521 aacagaccca gcaggcgacg ttcgccaaag ctcatgaatg ccccgcaggt gacaaccacc
     8581 agcaggatca ccaccgcttt gaggatggtc agcaggatct caatcagttc cggtgatatc
     8641 caactcattg ttgtgcctcc ttgagatcct caagatgcgc gccagccagc accggagcaa
     8701 taccggacat acccatcggc aagcccacct gccctgccgt cagcccttca gcgatttcaa
     8761 ccggcagcgt gaccgtgttg ccatcgtaac taaaggagac gtgtgtacct gcgttcacac
     8821 ctaacttcgc ggcatccgct gggttgagtt tgatgtacgg ctgcggcata cggctctgga
     8881 agaccggagc acgctgtgac aattcatcgc tgccaaacag gtggtaatac ggcgcgatac
     8941 gccatttccc gtcctgcggc tggaagcgtg ccggtacgct ggtgaagtaa tccagaccat
     9001 tttcgctggt ttcaaacaga cgcacgcccg gatcgccaaa gcgcagtttg ccgcccactt
     9061 cgtcctggaa tttgttccac gcctgcgggg agttccagcc cggcgcccag gcaaacggca
     9121 cttgcgaacg gtgcgcggtc ggctggttgt taccttccat cgagaaggtg aacatggtgt
     9181 caatatcctg cggctgacgc ggctcatgaa cgctgatatt ggcgcgcatg gcggtacgac
     9241 cgctgtaacg gtgcggttca cgggccagtt tctgcccacg aatacggaat gtcgcatccg
     9301 gcgcagcatc tttgatacct gccagttccg ggattttcgc cacaacagcg tcaatcacat
     9361 ggtcgagctg cgtccagtcc acttcacggc tcagcagggt gctgtgcagc gagtgtaacc
     9421 agcgccagct ttccagcatg acagttttgc tgtcgtaata agcaggatcg taaacctgga
     9481 agaaacgttg ggcgcggcct tcgttgttga tcaccgtacc gtcgctttca gcaaagctgg
     9541 cagcagaaag taccagatgg gcgttttcca taatcgctgt gcgttgatga tcaaccacca
     9601 tcaccagcgg cgctttagcc agcgcagcat tcacgcgggt agcggaagcg tgacgatgca
     9661 gatcgttttc cagcaccacc accgcgtcgg cgcgtccggt ttccagttcg gtcaacgctt
     9721 cttcaagcga accgccaccc ataatgccca gccccatgct gttgacggaa cgggcaatca
     9781 tggtgatacc aacgtcagcg ccgcgacctt tcagggcttt cgcgacgtta gccgcagcct
     9841 gaatcacctc tatgctaccg gcgttcgtcc cggagataat caacggtttc ttcgcacctg
     9901 ccagtgcctg cacgatgacg tcgattttgc tttgcagctc aggttcgata ccgtcaaccg
     9961 ctggcgcaga gttatccagc gcatgggcga tggcaaaacc taaacgcgcc tgatcttcaa
    10021 ccggtgcgcg gtaagtccac gccgcgatat catccagacg ggtgtcatca acgttggtaa
    10081 caaacagcgg atgcttcgca cgttgaccga tgttgaggat tgccgcaatc tgccagtcag
    10141 ccactttctg tgctgccgcc atttcgcgcg ctttaccttt cacagcctga cgcactgcca
    10201 gcgcgacgcg cgcgccggtc tgggtaacgt cttcgcccag caccagtacc gcatcgtaag
    10261 attcgatttc gcgcagagcc ggagtataaa tgccgccttc acgcagcact ttcagcgcca
    10321 gttgcagacg ttcctgctca ccgtgagcga taccggtgta gaagttttct tcgcccacca
    10381 gttcacgcag cgcaaagttg ctttccacgc tggcacgcgg agaaccaata ccgatcactt
    10441 tcttcgactg acgcagaata tctgccgcgc cctgcattgc ctgttcggcg ttgagggtaa
    10501 tgaaatcatc gccacgacgc tgtactggtt gacgcggacg atctttcagg ttgacgtaac
    10561 cgtaaccgaa acgaccacgg tcgcagagga agtagtggtt taccgtaccg ttgtaacggt
    10621 tttcgatacg acgcagttcg ccgtaacgtt caccggggct gatgttacag ccgatggaac
    10681 attgctggca gatgctcggc gcaaactgca tatcccattt acggttgtaa cgctcggagt
    10741 gcgttttgtc ggtaaatacg ccggtcgggc aaatttcgac caggttaccg gaaaattcgc
    10801 tttccagcgt gccgtcttcc gggcgaccga agtagacgtt gtcgtgcgca ccgtaaacgc
    10861 ccagatctgt accgtcagcg taatctttgt agtaacgcac acagcggtag caggcgatgc
    10921 agcggttcat ttcgtgagag atgaatggcc ccaaatcctg attacggtgg gtacgtttgg
    10981 tgaaacggta gcgacggaag ctgtgtccgg tcatcacggt catatcctga agatggcagt
    11041 taccgccttc ttcacatacc ggacagtcgt gcgggtggtt ggtcattaac cactcgacca
    11101 cactttcacg gaactgtttc gcttcttcgt cgtcaatgga aataaaggtg ccatcggaag
    11161 ccggtgtcat acaggacatc accaggcgac cacgcgtgtc ttccgcgttt tggtattgct
    11221 tcaccgcaca ctggcggcaa gcaccgacgc ttcccagcgc cggatgccag caaaagtaag
    11281 gaatatcaag gcccagagac agacaagctt ccagcaggtt gtccgctccg ttgacctcgt
    11341 attctttgcc gtctacatga attgtagcca ttagcatgct tccagttttc tcggtcaggg
    11401 accgagcgtt aatcgaaatt cggttaccag cgctctttca gcaggttcgg ctgaatccca
    11461 ttaatcaaat gggtattgct gaacggctgt ttgattcccg cctcaaattc ttcgcggaaa
    11521 tatttgatgg cgctctgtaa cggctccact gcaccaggtg cgtgggcaca gaaagtttta
    11581 cccgggccta agaatcgaca cagttgctca agtgtttcga tatcgcccgg ctgaccttca
    11641 ccacgctcca gcgcacgcag aattttcacg ctccacggca gaccgtcgcg gcacggcgta
    11701 caccagccgc aggattcacg ggcgaaaaac tcttccaggt tacgcaccag cgacaccatg
    11761 ttgatctcat ggtcaaccgc catcgccagc gccgtaccca gacggcttcc cgctttaccg
    11821 atactttcga attccatcgg cagatcaagg tgcgcttcgg tcaggaagtc agtccccgcg
    11881 ccgcctggct gccaggcttt aaatttcaga ccatcacgca taccaccggc gtaatcttcg
    11941 aggatctcgc gtgcggtggt gccgaacggc agttcccaca gtcccggatt tttcacccga
    12001 ccggagaagc ccatcagctt ggtgccagca tctttacttt tcgagatgtt ctgataccac
    12061 tccacgccgt tagcgaggat cgccggaacg ttacacaggg tttcgacgtt gttgacacag
    12121 gtcggtttgc cccatacgcc ggaggttgcc gggaaggggg gtttcgagcg tgggttagca
    12181 cgacgccctt ccagggagtt gattaacgct gtttcttccc cgcagatgta gcgccctgcc
    12241 ccggtatgga cgaacagttc gaagtcgaaa cctgttccca taatgttttt gccaagcaag
    12301 cccgcttcag tggcttcggc aatggcgcgg cgcagattta ctgccgcttc gatatattcg
    12361 ccacgcagga agatgtagcc acggtaagct ttcagcgcaa acgcggagat gagcatacct
    12421 tccaccagca ggtgcggcag ttgctccatc agcaggcggt ctttataggt gcctggctcc
    12481 atttcatcgg cgttacacag caggtaacgg atgttcatgg attcgtcttt cggcatcagg
    12541 ctccatttca ggccggtaga aaagcccgcg ccaccgcgcc ctttcagacc agcgtctttt
    12601 acctgattaa cgatttcgtc cggagacagc ccggtcagcg ccttacgcgc gccttcgtaa
    12661 ccgtttttgc tgcgatattc gtccagccac actggctgtt tgtcatcgcg cagacgccag
    12721 gtcagcggat gcgtttcggg agtacggata atgtttttca tttataccgc tccagcagtt
    12781 cagggatcgc ttccggggtc agatgcgcgt gagtatcctc atcgatcatc atgtttggcc
    12841 ctttatcaca gttccccagg cagcaagttg gcagcagcgt aaagcgaccg tcaaatgtcg
    12901 tttgccctgg tttgatgttt agctttttct cgagcgccgc ctgaataccc tggtaaccgt
    12961 tgatatgaca gaccacgctg tcgcaataac ggatcacatg gcggccaacc ggctggcgga
    13021 agatctggct gtagaacgtt gccacacctt cgacgtcgct tgccggaata cccagcacat
    13081 cggcgatcgc gtggatcgca ccatccggca cccagccacg ctgcttctga acgattttca
    13141 gcgcttcaat ggacgccgca cgcgggtctt cgtagtggtg catctcgtgc tcaatcgctt
    13201 cacgctctgc cgcactcagc tcaaaagcct cggtttgtgg ttgttgattc tcgtgcataa
    13261 ttagcggtcc acatctgaca taacaaaatc gatactgccc agataaacaa tcaggtcaga
    13321 caccaggctg ccgcggatcg ccgccggaat ttgctgcaaa tgcgcataac tcggcgtgcg
    13381 gatacgagtg cgataactca tggtgctacc gtcgctggtc aggtagtaac tgttgatccc
    13441 cttggtcgcc tcaatcatct ggaaagattc attggcaggc atcaccggcc cccacgacac
    13501 ttgcaggaag tgggtgatca gggtttcgat atgttgcagc gtgcgctctt tcggcggcgg
    13561 cgtggtcagc gggtgatccg ctttgaacgg gccttccggc atgttgttga ggcactgctc
    13621 aagaatgcgc agactctggc gcagctcttc cactttcagc attacgcggg tgtagcagtc
    13681 agaaacacca ccaccaaccg ggatttcaaa gtcgaagttt tcatagccag aataaggacg
    13741 cgccttacgc acgtcgaagt cgatcccggt agcacgcagg cccgcgccag tggtgcccca
    13801 ctccagcgcc tctttcgcgc cataggcggc aacgccctgg gaacgacctt tcagaatggt
    13861 attttgcagc gccgctttct cgtaagacgc cagacgtttc ggcatccagt cgaggaactc
    13921 acgcagcagg cgatcccagc cgcgcggcag gtcgtgcgct acgccgccaa tacggaacca
    13981 cgccgggtgc atacggaaac ccgtgatcgc ttccaccaga tcgtaaattt tctgacgatc
    14041 ggtaaaggcg aagaacacgg gcgtcattgc gccgacgtcc tgaataaagg tcgagatgta
    14101 cagcaggtgg ctgttgatac ggaacagttc ggagagcata acgcgaatga cgttaacgcg
    14161 atccggcacg gtgatcccgg ccagtttctc taccgccagc acgtaaggca tttcgttaac
    14221 gcagccgccg aggtattcaa tacggtcggt atacggaatg tagctgtgcc aggactggcg
    14281 ctcgcccatt ttctccgcac cacggtggtg gtagccgatg tctggtacgc agtcgacaat
    14341 ctcttcgccg tcgagttgta aaacgatacg gaaagccccg tgcgccgacg ggtggttcgg
    14401 accgaggttg aggaacatga agtcctcgtt ttcggtgccg cgcttcatcc cccactcttc
    14461 cggtttgaag gtcagggctt ccatctccag atcctgtttg gctttggtca gctcaaacgg
    14521 cgagaattcg gtagcgcgcg ccgggtaatc tttacgcagc gggtgacctt tccaggtttg
    14581 cggcatcatg atgcggcgca ggttcgggtg accgtcgaaa gtaatgccaa acagatccca
    14641 ggtttcacgc tcataccagt tagcgttcgg gaacagtttg gtgaaggtcg gtacgtgcag
    14701 gtcgttttct gccagcgcca ccttcagcat gatgtcgcgg ttacgatcga tagaaatcag
    14761 atggtagaaa acggaaaaat ccgcggcagg taacccttcg cggtgtgtgc gcagacgttc
    14821 gtccatgccg tgtaagtcaa acagcatgac gtaaggtttc ggcagtttct ttaagaaatc
    14881 gccaacttcc agtaattgtt cacgcttgat ccacacaacg ggaaccccgg tgcgagtcgc
    14941 ctgaacagta aaggcatccg gcccaaaacg gttgcgcagt tcgccaatta ccggatcatc
    15001 aagatgatcg cgggtctgcc aggcgggttc ttgcgcggtt aagtcggtca tattgttcac
    15061 cattgcaaat ggtccgtggt gactgtcggc gcagtaagct tcgcgaaata gatttaggaa
    15121 taagcgaaga aaaatccctt tgccgacagg cgcaaattaa atctcgtcag gtgtacgcag
    15181 gttggttacg gcaatacgtt caccgcgctt gcgttcgcgc tctgattgca tattggcgcg
    15241 ataaacgccc tgatcgccaa ccacccagga gagcggacga cgttctttgc cgatagattc
    15301 ctgcaacagc atcagtgcct gcatgtacgc ttcaggacgc ggcgggcagc ccgggatata
    15361 cacatcaacc gggatgaatt tatcgacgcc ctgcacaacg gaataaatat cgtacatacc
    15421 accagagttg gcacaggcac ccattgagat aacccatttt ggttccagca tctggtcata
    15481 cagacgctga ataaccggtg ccattttggt aaagcaggtt cctgcaacca ccatcaggtc
    15541 agcctgacgc ggcgaagcac gcaatacttc tgcgccaaaa cgcgccacgt catgcaccgc
    15601 ggtaaacgaa gtcaccatct caacgtaaca gcaggaaaga ccgaagttat acggccaaat
    15661 tgagttttta cgaccccagt taaccatgtc attgagcttg cccataaaca cgtttttgtt
    15721 aacttcttgc tccagagggt cggttacgat ctcctgcttt tgcagggggt aacggtcgtt
    15781 ctcaccgttg ggatctatgc gggtgagcgt ataatccatc ttaatgcctc gcggttagcg
    15841 ttgacgatta gcgatactgt tcgtttccgg gttcatacgc tcgcggcgtg aacgcgcggg
    15901 cgtccagtcc agcgcgccaa tacgcaccag ataaaccaga cctgccagta acacaaaaat
    15961 aaaaattgca gcttccacaa agcctaccca gccgctttcg cggatagagg ttgaccatgc
    16021 gaacagatac agcgcttcaa cgtcgaagat aacgaagaac atggccacca gataaaactt
    16081 ggcggacagg cgtaagcggg cggagccgac cgagtcgata ccggattcaa acggcacgtt
    16141 tttcgacctc gcgcgtgcgc gaccgcctaa aaaccaaccg cctaccagca tcaggcaaca
    16201 caggccaatg gcaacgataa gaaagatagc gaatgcccag tgatgagcga tgacttcagt
    16261 ggatgttgac atactcattg cttactcatc aaaagtagcg ccagattcac tgctcttcac
    16321 ggcagatgga cgccacatcg attcatgggg aggaataaaa aaaaccttac aatcactgta
    16381 gaaattcttt tatacagcta attgatgtgg tcttttactc ctttctataa ccttttgtca
    16441 actttaacaa aagtttcttc acattagttt acataatatc aacaccatta gcatttaatg
    16501 ccctttcacc ccagatcctt gacgactcca ggataattag atgttgttga atcgtgtccg
    16561 ttgtgaagca atggaaaaaa tacgggtcta ttttgacagg aatttgtgtc gattcctccc
    16621 cccaaaagag agtattttct tgatctgtga cacgcttttg tcattccata acaaaaacgc
    16681 agcaacaaat ttacgtattt tttaacatca ttgtagcagg tgattttttt caggcgatta
    16741 tttgtgcgtt cgggacgtga atctctggtg attgaaaaat gaacagtttt gtacgttctg
    16801 cactatgcga ggaaggattt ttactaaaaa aaagccgctg gggtttaaaa cacccccagc
    16861 ggctcgtttt tacactattg tctcaggaat tatctatcgt ccgtcgatta ctcgatatcc
    16921 ctttcaatca acaatgaatc atccccttcc ggagcagaca ttgggctgta ttgccacgga
    16981 ttatggtagc tctccatcgc ctgatagatc acctgggcca gctcattatt actggacggg
    17041 tcatagcaca gcaaatattc ggtatcaggt agcggcggta agccatctac tccactcagc
    17101 acacgcaggt ccgggctcat catctcaacc ggccttgccg tcacgccaag accggctttc
    17161 actgccgcac gaacggccgg aagcgtcgag gcgacataag ccagtcgcca tggaatatct
    17221 gctttattaa gcgtcgccag caccatatcg cgaaacggac ttggatcatc cagcaataca
    17281 agagggatcg gctcgccttt ttgcaatacg tattccgctg cgcagtacca gtgtgttggc
    17341 gaggttcgca ggttcaatgc cttaaacgct gaaggacgat gggtggttac catcaaatcc
    17401 acttcctggg attccagcat ttctgccata taggcattac gtttaacgcg gacatccagc
    17461 gctaatttcg gataaaccga actcacgcga tttaacagga aaggtaagat cgtatcggca
    17521 gattcatctg aagcaccgat agttaacacg ccctgaagat tactgaacat taatgatgag
    17581 caggcctcat cattaaaacg caggattttc ctggcgtaac caagaagttg aatgccatgt
    17641 tcagttaaca gtttgttgcg accgtgacga gcgaacagtt ctttcccaac gagttgttcc
    17701 agacgctgca tttgctgact tacggcggac tgagtacgac acacagcggc agctgcggca
    17761 gcaaaagtgt tcagatcggc aacagcaaca aatgttctca gcagatcgag gtcgaggtta
    17821 attatcggac gatttgcact tatcatatat tatcacttac tggcggctca tactgagctg
    17881 gttaatgctg tgcacacaca aacaagcaat tccatttgta atgtgcctcc ctggcagttt
    17941 catccggaac ccggacgaaa gtaaaaatgc atatgagttg cactaaaaaa gcgactcaca
    18001 ttgttccgtt ataatgcctg aagtagatca cagaatatat cttcagggat cgcatatcta
    18061 ttaagttact cactcttttc tatttatgac atgcgcgtgt ttgtataaat gtaaatgtga
    18121 gtccttgttc cactctcgtg cagcatcgct ggtcatacgc gaacacgtac aaacagcaat
    18181 ggtgaggcgg catcaagagc agggatccgt catttatgcg agcattttac cccaaaaacc
    18241 ttttatttat aagggtcatt gcgaattatc tgatgcaaag ttatgttatg ttaggcaaag
    18301 taatcttcta ttattaataa gcacatcaaa acctttttga atattaaat
//
LOCUS       DAPGWB010000089        18193 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.089, whole genome shotgun sequence.
ACCESSION   DAPGWB010000089 DAPGWB010000000
VERSION     DAPGWB010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 18193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18193
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.089"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(236..1828)
                     /gene="lsrK"
                     /locus_tag="RHX79_002905"
     CDS             complement(236..1828)
                     /gene="lsrK"
                     /locus_tag="RHX79_002905"
                     /EC_number="2.7.1.189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416028.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer-2 kinase"
                     /protein_id="HDV2198056.1"
                     /translation="MARLFTPSESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWR
                     HLAVPDVPGSMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNE
                     GAPIWACANVDARAAREVSELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHRSD
                     IYRQASTITMISDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADIL
                     SPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTF
                     WQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAE
                     RLGIDTYTLLEEMASRVPPGSWGVMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKAT
                     LFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIP
                     VVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDKWQAV
                     YQDQLGLVDHGLTTSLWKAPGL"
     gene            complement(1907..2860)
                     /gene="lsrR"
                     /locus_tag="RHX79_002906"
     CDS             complement(1907..2860)
                     /gene="lsrR"
                     /locus_tag="RHX79_002906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LsrR"
                     /protein_id="HDV2198057.1"
                     /translation="MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTR
                     LKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRL
                     GIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGI
                     GQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDD
                     ATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTDIKIHNELIGLPLSSLKTI
                     PVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS"
     gene            3109..4644
                     /gene="lsrA"
                     /locus_tag="RHX79_002907"
     CDS             3109..4644
                     /gene="lsrA"
                     /locus_tag="RHX79_002907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter ATP-binding
                     protein LsrA"
                     /protein_id="HDV2198058.1"
                     /translation="MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLG
                     GNGAGKSTLMKIIAGITPADSGTLEIGGNNYARLTPVHAHQLGIYLVPQEPLLFPSLS
                     IKENILFGMAKKQLSMQKMKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSR
                     ILILDEPTASLTPAETERLFTRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTI
                     ALSGKTSELSTDDIIQAITPVVREKSLSASQKLWLELPGNRPQHAAGTPVLTLENLTG
                     EGFRNVSMTLNAGEILGLAGLVGAGRTELAETLYGLRTLRGGRIMLNGKEINKLSTGE
                     RLLRGLVYLPEDRQSSGLNLDASLAWNVCALTHNLRGFWAKTAKDNATLERYRRALNI
                     KFNQPEQAARTLSGGNQQKILIAKCLEASPQALIVDEPTRGVDVSARNDIYQLLRSIA
                     AQNVAVLLISSDLEEIELMADRVYVMHQGEIAHSALTGRDINVETIMRVAFGDSQRQE
                     VSC"
     gene            4638..5666
                     /gene="lsrC"
                     /locus_tag="RHX79_002908"
     CDS             4638..5666
                     /gene="lsrC"
                     /locus_tag="RHX79_002908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter permease LsrC"
                     /protein_id="HDV2198059.1"
                     /translation="MLKFIQNNREITALLAVVLLFALPGFLDRQYLSVQTLTMVYSSA
                     QILILLAMGATLVMLTRNIDVSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLA
                     GFFNGVLVAWLKIPAIVATLGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLFGVS
                     AIGWLTIILVAFMAWLLAKTAFGRSFYATGDNLQGARQLGVRTEAIRIVAFSLNGCMA
                     ALAGIVFASQIGFIPNQTGTGLEMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQID
                     SVLVLLRIPAWWNDFIAGLVLLAVLVFDGRLRCALERNLRRQKYARFMTPPPSVKPAS
                     SGKKREAA"
     gene            5666..6658
                     /gene="lsrD"
                     /locus_tag="RHX79_002909"
     CDS             5666..6658
                     /gene="lsrD"
                     /locus_tag="RHX79_002909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter permease LsrD"
                     /protein_id="HDV2198060.1"
                     /translation="MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFIC
                     IGIVALPLTMVIVSGGIDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGL
                     INAGLIIYTKVNPLVITLGTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDV
                     LGLPVPLIIFLICLLVFWLWLHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMT
                     GLASAVAAVLLVSYFGSARSDLGASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLV
                     GYLQQGLQMAGVPNQVSSALSGALLIVVVVGRSVSLHRQQIKEWLARRANNPLP"
     gene            6670..7692
                     /gene="lsrB"
                     /locus_tag="RHX79_002910"
     CDS             6670..7692
                     /gene="lsrB"
                     /locus_tag="RHX79_002910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter substrate-binding
                     protein LsrB"
                     /protein_id="HDV2198061.1"
                     /translation="MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTS
                     GGNGAQQAGKELSVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPAL
                     KRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS
                     SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAII
                     APDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISV
                     YVADALLKKGSMKTGDKLDIQGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKEN
                     IGKYDF"
     gene            7719..8594
                     /gene="lsrF"
                     /locus_tag="RHX79_002911"
     CDS             7719..8594
                     /gene="lsrF"
                     /locus_tag="RHX79_002911"
                     /EC_number="2.3.1.245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxy-5-phosphonooxypentane-2,4-dione
                     thiolase"
                     /protein_id="HDV2198062.1"
                     /translation="MADLDDIKDGKDFRTDQPQQNIPFTLKGCGALDWGMQSRLSRIF
                     NPKTGNTVMLAFDHGYFQGPTTGLERIDINIAPLFEHADVLMCTRGILRSVVPPATNK
                     PVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLV
                     DAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVAGC
                     PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHN
                     ETADRAYELYLSEKQ"
     gene            8618..8908
                     /gene="lsrG"
                     /locus_tag="RHX79_002912"
     CDS             8618..8908
                     /gene="lsrG"
                     /locus_tag="RHX79_002912"
                     /EC_number="5.3.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione
                     isomerase"
                     /protein_id="HDV2198063.1"
                     /translation="MHVTLVEINVHEDKIDEFIEVFRQNHLGSVQEEGNLRFDVLQDP
                     EVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP"
     gene            8965..9723
                     /gene="tam"
                     /locus_tag="RHX79_002913"
     CDS             8965..9723
                     /gene="tam"
                     /locus_tag="RHX79_002913"
                     /EC_number="2.1.1.144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trans-aconitate 2-methyltransferase"
                     /protein_id="HDV2198064.1"
                     /translation="MSDWNPSLYLHFAAERSRPAVELLARVPLENIKYVADLGCGPGN
                     STALLHQRWPAARITGIDSSPAMIAEARSALPDCQFVEADIRNWQPEQALDLIFANAS
                     LQWLPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLA
                     GVHAYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFL
                     KRYHQMLEEQYPLQENGQILLAFPRLFIVARRME"
     gene            complement(9727..10641)
                     /locus_tag="RHX79_002914"
     CDS             complement(9727..10641)
                     /locus_tag="RHX79_002914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416037.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bestrophin family protein"
                     /protein_id="HDV2198065.1"
                     /translation="MIVRPQQHWLRRIFVWHGSVLSKISSRLLLNFLFSIAVIFMLPW
                     YTHLGIKFTLAPFSILGVAIAIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKT
                     TLPDSASVREFARLQIAFAHCLRMTLRKQPQAEVLAHYLKTEDLQPVLASNSPANRIL
                     LIMGEWLAVQRRNGQLSDILFISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTV
                     YLFCIMLPFALVVDLHYMTPFISVLISYTFISLDCLAEELEDPFGTENNDLPLDAICN
                     AIEIDLLQMNDEAEIPAKILPDRHYQLT"
     gene            complement(10848..12299)
                     /gene="uxaB"
                     /locus_tag="RHX79_002915"
     CDS             complement(10848..12299)
                     /gene="uxaB"
                     /locus_tag="RHX79_002915"
                     /EC_number="1.1.1.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagaturonate reductase"
                     /protein_id="HDV2198066.1"
                     /translation="MKTLNRRDFPGAQYPERIIQFGEGNFLRAFVDWQIDLLNEHTDL
                     NSGVVVVRPIETSFPPSLSTQDGLYTTIIRGLNEKGEAVSDARLIRSVNREISVYSEY
                     DEFLKLAHNPEMRFVFSNTTEAGISYHAGDKFDDAPAVSYPAKLTRLLFERFSHFNGA
                     LDKGWIIIPCELIDYNGDALRELVLRYAQEWALPEAFIQWLDQANSFCSTLVDRIVTG
                     YPRDEVAKLEEELGYHDGFLDTAEHFYLFVIQGPKSLATELRLDKYPLNVLIVDDIKP
                     YKERKVAILNGAHTALVPVAFQAGLDTVGEAMNDAEICAFVEKAIYEEIIPVLDLPRD
                     ELESFASAVTGRFRNPYIKHQLLSIALNGMTKFRTRILPQLLAGQKAKGTLPARLTFA
                     LAALIAFYRGERNGETYPVQDDAHWLERYQQLWSQHRDRVIGTQELVAIVLAEKDHWE
                     QDLTQVPGLVEQVANDLDAILEKGMREAVRPLC"
     gene            complement(12526..13944)
                     /locus_tag="RHX79_002916"
     CDS             complement(12526..13944)
                     /locus_tag="RHX79_002916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDV2198067.1"
                     /translation="MHVHPISTFRLFQEGHLLRNSIAIFALTTLFYFIGAELRLVHEL
                     SLFWPLNGVMAGVFARYVWLNRLHYYAISYVAMLVYDAITTEWGLVSLVINFSNMMFI
                     VTVALLVVRDKRLGKNKYEPVSALRLFNYCLIAALLCAIVGAIGSVSIDSLDFWPLLA
                     DWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAF
                     PLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPEMFSARLGIA
                     TMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTV
                     MLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNP
                     VDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTC
                     LYRSKKDGRNRTSTMRYGEEVV"
     gene            complement(14083..14442)
                     /locus_tag="RHX79_002917"
     CDS             complement(14083..14442)
                     /locus_tag="RHX79_002917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4186 domain-containing protein"
                     /protein_id="HDV2198068.1"
                     /translation="MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAAD
                     FVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQR
                     YIVAVIYHWLVVQMNQP"
     gene            complement(14442..15368)
                     /gene="glsB"
                     /locus_tag="RHX79_002918"
     CDS             complement(14442..15368)
                     /gene="glsB"
                     /locus_tag="RHX79_002918"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase B"
                     /protein_id="HDV2198069.1"
                     /translation="MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIA
                     ICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLV
                     QLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARS
                     EFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKA
                     IHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAI
                     AVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY"
     gene            complement(15432..16820)
                     /gene="sad"
                     /locus_tag="RHX79_002919"
     CDS             complement(15432..16820)
                     /gene="sad"
                     /locus_tag="RHX79_002919"
                     /EC_number="1.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate-semialdehyde dehydrogenase"
                     /protein_id="HDV2198070.1"
                     /translation="MTITPATHAISINPATGEQLSVLPWAGANDIENALQLAAAGFRD
                     WRETNIDYRAEKLRGIGKALRARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAE
                     HGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLK
                     HAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGA
                     AIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFII
                     EEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLL
                     LGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITVAKDAEHALELANDSEFG
                     LSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHE
                     CCNIQTVWKDRI"
     gene            16921..17802
                     /locus_tag="RHX79_002920"
     CDS             16921..17802
                     /locus_tag="RHX79_002920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2198071.1"
                     /translation="MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELG
                     VDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAV
                     RIPATLAEFNHRYPKIQFSLSTGPSGTMLEGVLEGKLNAAFIDGPINHTAIDGIPVYR
                     EELMIVTPQGHAPVIRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESY
                     HGMLACVVAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLE
                     AFIQLLDVPDSAKQGYQ"
     gene            17880..18176
                     /gene="yneK"
                     /locus_tag="RHX79_002921"
                     /pseudo
     CDS             17880..18176
                     /gene="yneK"
                     /locus_tag="RHX79_002921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416044.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
BASE COUNT         4588 a         4641 c         4518 g         4446 t
ORIGIN      
        1 agtttattaa accccttttg catccattag tgtctttagg aatattcgct ataaaataag
       61 ggttgtgctt aatgctttaa gaaaaatagc aattttccct tgaatatagt actggtgatg
      121 gaacgatgaa tctgcaagct ggcttttaac aagccagctc taaaagaagg gaaataagaa
      181 taactatact caaaaactaa cagccacggt catcatgatg tggctgtcaa tgaaactata
      241 acccaggcgc tttccataac gacgtcgtca gtccatgatc aaccagcccc agctgatcct
      301 gataaactgc ctgccactta tcgcgtgaat cctgataaag ttcatgcttt tccgggtctg
      361 gtgtgtgcgt ccgttcccag cgaaccaggc gttctccggt ttctgccatt gatgaaaaaa
      421 ttccggcacc gacgccagct gcaatggcac atcctaatgc agtggcttct ttgaccaccg
      481 gaatattgac gggtaatccc gagacatcag cgagaatttg actccataat ttcccttttg
      541 aacctccgcc tgcaaagact aacgatgaag gatgaatatt cgagaaatca gcaatttgct
      601 gcaagttaca cgctgataca atcgccgcat tttcttccag cgcacggaac aatgtcgctt
      661 tgttacattt atccgggtca atggacaagt taataaagga aggcgcagcg tgataccagg
      721 ttttaaagcg cattctgtcg gagaagatcg gcattacgcc ccacgaccca ggcggcaccc
      781 gactggccat ctcttccagc agcgtatagg tgtcgatgcc taaacgttcg gcaatcagtt
      841 tttcttcggc acagaaagca tcgcggaacc agcgcatggt gagtccggta aaaaagctta
      901 tagattcagc ttgtaccatg ccaggaataa catgaggatt aacgcgcacg ttcatttctg
      961 ggtctgtcac cggcgcggct aaatttacaa cttgctgcca gaatgtgccg ccaagaaccg
     1021 cggtttgtgc cggacgcaca acgcctaacc caaggcaacc aagctgcacg tcgcctcctc
     1081 caacgaccac cggagtgccc gccttcagac cgcagagttc cgccgcttgt gaacttacca
     1141 cgcccagcaa tgtgccggtt tctttgacag gagaaagaat atcggcacgc aggccagcca
     1201 tatccagcaa tgcaggtttc cagtcacggg tggttagatc aagaagtccc gtggtgccag
     1261 cgttagaggg atccaccgcc agttcgccgc tgagcatata ggccagccag tcgctgatca
     1321 tggtgatggt tgatgcctga cggtaaatat cggaacgatg gtgcgccagc caaagtaatc
     1381 tggggatggc acttaaagcc agtgtttgtc cggtcgcgcg ataaacttcg ttttcaaagg
     1441 tattgttgtg cagttcttta agttcgctaa cttcgcgtgc cgctctggca tccacattgg
     1501 cgcaggccca gatcggggct ccttcattat tatataaaac aatgccttca cgcatcgaac
     1561 atgccgaaac ggcagcgata tactccgggg ctatgccggc gttgtgcagc gcctggcgca
     1621 tacactcaca cgccagttgc cagtttttgt tgagatcaaa ttccatagaa ccaggaacgt
     1681 ccggtactgc caggtgccgc cactccgcct gtcccactgc tatttgattg ccttccaggt
     1741 cgaatatcac agcccgaata cttccggtac ctgcatccag cgccatcagg taatactttg
     1801 attctgaagg ggtaaagagt cgagccatta gattatcctc ggcttatgcg ttctgtctgt
     1861 tcctctatac gttctccatc attcccggta ataaggtcat gcaaatttaa ctacgtaaaa
     1921 tcgccgctgc tgtgtcctga tcggtaacca gtgcgttgat ataaccgcct ttcattgcag
     1981 cggcaattgc ttcggcttta ttttctcccc ctgccacgcc aacccggacg ggtatggtct
     2041 tcagcgagct taaaggtaag ccaatcagtt cgttatgtat tttaatatcc gtgacaacgt
     2101 caccttttgc atcaaaaaag tagcctaaaa tgtcgccaac cgcccctttt cgaccaatca
     2161 ttaactgttc gccctggctg atataaccgg agcgaatgat cgtcgcgtcg tcctgttgac
     2221 tgacggcccc aatgccgaca atcgccacat cggctgcttg cgcggctaac agaacatctt
     2281 tgacgcaatt ttcatttttt agcgtacggg caatgtcagc ggaggatgcc cgcaacggag
     2341 ccggaataat attcacactg cacgccgcgt taagctgccc gatacccgtc atataagaac
     2401 cgacgccacc ggagagcgtg accaggcgaa tttgctgtga cgaaataaaa ccacttaagc
     2461 gttgcagcgt attcatggtt gcctcgccaa aaccaatcgc cagcatctgt tgtggttgaa
     2521 gtaaactcat caacatatgc gccgcgccta tccccagtcg cccgccgaca tcagcatccg
     2581 caagcccagg gatcacccgg acatgttgca gcgaaaactg acgacgtaat tgagtttcat
     2641 attccagaca gccttcaaag cgagaattaa tctgtacgcg aataatgccg gactgatgcc
     2701 ctttctccag caagcgcgac actttcaaac gggtcaggcc gagacgatcg ctgatctcgc
     2761 tctgggtcag cccgtcgtga tagtaaaacc acgcgatccg cgcgacctgt tcttcttcac
     2821 acattccctg ttctgaaatt gccgaatcgt tgattgtcat aattcattct tcactttgaa
     2881 catatttaaa tctttaatgc aattgttcag ttcttgcgca tttatatctg tgatggcagc
     2941 cacagtttga ctctacgagc atgaacaaac gcaaccgtga aaatcaaaat agcataaatt
     3001 gtgatctatt cgtcggaaat atgtgcaatg tccacctaag gttatgaaca aattaaaagc
     3061 agaaatacat ttgttcaaaa ctcacctgca aaactgaacg ggggaaatat gcaaacgagt
     3121 gatacccgcg cgttaccgct actttgcgcc cgctcggttt ataaacagta ttcaggggtc
     3181 aatgtcctga aaggcatcga ttttacgttg catcaggggg aggtccacgc cctgctcggc
     3241 ggcaatggtg ccggtaaatc gacgttaatg aagattattg ccggtattac ccctgctgat
     3301 agcggtacgc tggagattgg gggcaacaac tacgccagat taacgccagt tcatgctcat
     3361 cagctgggca tttatctcgt tccccaggaa ccgctgcttt tcccaagcct gtcgataaaa
     3421 gaaaacatcc tgtttgggat ggcaaaaaaa cagctctcca tgcaaaaaat gaagaacttg
     3481 ctggcggcgc tgggctgcca gtttgatctg catagtctgg caggatcgct ggatgtcgcc
     3541 gatcgccaaa tggtggaaat cctccgcggg ctaatgcgcg actcgcggat tctgatcctc
     3601 gatgaaccta ccgcctcgct tacccctgcg gaaaccgaac gcttgtttac tcgcttgcaa
     3661 gagctgcttg ctactggcgt gggtattgtt tttatctcgc ataagctgcc ggaaattcgc
     3721 cagattgccg atcgaattag cgtgatgcgc gacggaacca tcgccttaag cggcaaaacc
     3781 agcgaactgt ctaccgacga cattattcag gccatcacgc cagtggtacg ggaaaaatcg
     3841 ctctctgcca gccaaaaatt atggctggag ttacctggta accgcccaca acatgctgcc
     3901 ggaacgccgg tgctgacact ggaaaatctg accggcgaag gtttcaggaa tgtcagcatg
     3961 acgctcaatg ccggagaaat tctgggcctg gctgggctgg tgggggccgg acgcacagaa
     4021 ctggccgaga cgctctatgg tctgcgtact ttgcgtggcg gacgcattat gctgaatggt
     4081 aaagagatca ataaattatc cactggagaa cgtttactgc gcggtctggt ttatctgccg
     4141 gaagatcgcc agtcatccgg actgaatctc gatgcttcgc ttgcctggaa cgtctgcgcc
     4201 cttactcata accttcgtgg attctgggcg aaaaccgcga aagataatgc caccctggaa
     4261 cgttatcgtc gggcgctgaa tattaaattt aaccaaccgg aacaagctgc acggacatta
     4321 tccggtggca accagcaaaa aatcctcatt gccaaatgcc tggaagcttc gccgcaagca
     4381 ttgattgtcg atgagccgac gcgcggcgtg gatgtctcgg cccgtaatga tatctaccag
     4441 ctgttgcgca gcatcgccgc acaaaatgtg gcagtgctgc ttatctcctc cgatctggaa
     4501 gagatcgaac tgatggcaga tcgcgtgtat gtgatgcatc agggcgaaat tgcccactct
     4561 gcactgaccg ggcgcgatat taatgtcgag actattatgc gcgttgcctt cggcgatagt
     4621 cagcgtcagg aggtgtcatg ctgaagttta ttcagaacaa ccgtgaaatc acggcactgc
     4681 tggcggtggt gctgctgttt gcattacccg gttttctcga ccgccagtat ttaagtgtgc
     4741 aaacgctgac catggtttat agcagcgcgc aaatcctgat cctgctggca atgggcgcga
     4801 cgctggtaat gcttacgcgc aatattgatg tttcagtggg ttcgattacc ggaatgtgcg
     4861 cagtgctgtt ggggatgtta ctgaacgcgg ggtattcact acctgttgct tgtgtcgcga
     4921 ctttactgct tggtttgctc gcgggatttt tcaacggtgt cctggtcgcg tggctaaaga
     4981 tccctgccat tgttgccacc cttggcacgt tagggttgta cagaggcatc atgttgctgt
     5041 ggactggcgg taaatggatt gaagggttac ccgccgaact gaaacagctc tccgcaccgc
     5101 tgctgtttgg cgtttccgcg attggttggt tgacgataat tctggtggca tttatggcct
     5161 ggctgctggc aaagacggcg tttggacgca gtttttatgc cacgggcgat aatttacagg
     5221 gcgctcgtca actgggtgtt cgtacggaag ccattcgcat tgtggcattt tcgttgaacg
     5281 gctgcatggc ggcactggcg ggaattgtgt ttgcttcgca gattggtttt atccccaacc
     5341 agaccggtac cgggctggag atgaaagcaa ttgcagcctg cgtgctgggc ggcattagtt
     5401 tgctcggcgg ttccggtgcg atcatcggtg cggtactcgg cgcatggttc ctgacgcaga
     5461 tcgatagcgt actggtgctg ttgcgcattc cggcatggtg gaacgatttt atcgcgggcc
     5521 tcgtgctgct ggcggtgctg gtgtttgatg gacgcctgcg ttgtgcgctg gaacgtaatc
     5581 tacggcggca aaaatatgcc cgctttatga cgccaccgcc atccgttaaa cccgcttcgt
     5641 caggtaaaaa acgggaggcc gcataatgcg tattcgctac ggttgggaac tggctcttgc
     5701 cgcactgctc gttattgaga ttgtcgcatt tggtgcaatt aacccgcgaa tgttagatct
     5761 caatatgttg ctgttcagca ccagtgactt tatctgcatt ggcattgtcg ccctaccgct
     5821 gacgatggtg attgtcagtg gcgggatcga tatttcgttt ggttcgacca tcggcctctg
     5881 cgccattgca ttgggcgtac tgtttcaaag tggtgtgccg atgccgctgg cgatactcct
     5941 gaccttactg ctcggcgcat tgtgcgggct gatcaacgcc ggattaatta tctataccaa
     6001 agttaacccg ctggtgatta cgcttggcac gctgtatctg tttgccggaa gcgctctgct
     6061 gctttccggt atggccggag cgacggggta cgaaggtatt ggtggattcc cgatggcgtt
     6121 tacagatttc gctaacctgg atgtgctggg actccccgtt ccgctgatta tcttcctgat
     6181 atgtctcctc gttttctggc tctggctgca taaaacccat gccggacgta atgtgttttt
     6241 gattgggcaa agcccgcgcg tggcgcttta tagcgcgatt ccagttaacc gcaccttatg
     6301 tgcgctctat gccatgacgg ggctggcgtc tgcggtcgcc gctgtgctgc tggtatcgta
     6361 ttttggttca gcacgttccg atctcggtgc gtcgtttctg atgcccgcca tcaccgccgt
     6421 ggtgcttggc ggtgccaata tttatggtgg ttccggttcc attatcggca ccgccattgc
     6481 ggttttatta gtgggatatt tgcaacaagg tttgcaaatg gcaggagtgc caaatcaggt
     6541 gtccagcgcc ctttccggtg cgctacttat cgtcgttgtc gtaggtcgtt ccgttagcct
     6601 gcatcgccag caaattaaag agtggctggc gcgtcgggcc aataacccat tgccataaag
     6661 gatatcttca tgacacttca tcgctttaag aaaatcgcct tacttagcgc tcttggcatt
     6721 gccgcaatct ctatgaatgt gcaggccgca gagcgtattg catttattcc caaactggtt
     6781 ggcgtgggat tttttaccag cggtggcaac ggcgcacaac aagcgggtaa agagctgagc
     6841 gttgatgtga cctacgacgg gccgacagaa cccagtgttt ctggtcaggt acagttgatt
     6901 aataacttcg tcaatcaagg ttataacgcc attatcgttt ctgcggtttc gcctgatggc
     6961 ttgtgtccgg cactgaaacg cgccatgcaa cgtggtgtga gagtgctgac ctgggactct
     7021 gatactaaac cggagtgccg ctcttactac attaatcagg gaacgcccgc ccagttggga
     7081 ggtatgttgg tggatatggc ggcgcgtcag gtgaataaag acaaagccaa agtcgcgttt
     7141 ttctactcaa gccccaccgt tacggaccaa aaccagtggg tgaaagaagc gaaagcgaaa
     7201 atcgccaaag agcatcctgg ctgggaaatt gtcactacgc agtttggcta taacgatgcc
     7261 actaaatcat tacaaaccgc agaaggaata ttaaaagcgt atagcgatct cgacgccatt
     7321 atcgcccccg acgccaacgc cctgcccgct gccgcacaag ccgcagaaaa cctgaaaaat
     7381 gacaaagttg cgattgtcgg attcagtacg ccaaacgtga tgcgtccata tgtggaacgc
     7441 ggcacggtga aagaatttgg cctgtgggat gtggttcagc aaggcaaaat ttcagtgtat
     7501 gtcgcggatg cattattgaa aaaaggatca atgaaaacgg gcgacaagct ggatatccag
     7561 ggcgtaggtc aggttgaagt ctcgccaaac agcgttcagg gctatgacta cgaagcggat
     7621 ggtaatggca tcgtactgtt accggagcgc gtgatattca acaaagagaa tatcggcaaa
     7681 tacgatttct gatgtgcatt acttaaccgg agtaagttat ggcagattta gacgatatta
     7741 aagatggtaa agattttcgt accgatcaac cgcaacaaaa tatccctttt accctgaaag
     7801 gttgcggtgc gctggattgg ggaatgcagt cacgcttatc gcggatattt aatccgaaaa
     7861 cgggtaatac cgtgatgctg gcctttgatc atggttattt tcaggggccg actaccggac
     7921 ttgaacgcat tgatataaat atcgccccgc tgtttgaaca tgccgatgta ttaatgtgta
     7981 cgcgcggcat tttgcgcagc gtagttcccc cagcgaccaa taagccggtg gtactgcggg
     8041 cgtcaggtgc gaactctatt ctggcggaat taagtaatga agccgtggcg ttatcgatgg
     8101 atgatgccgt gcgcctgaac agttgcgcgg tggcggcgca ggtttatatc ggcagcgaat
     8161 atgaacatca gtcgatcaaa aatattattc agctggttga tgccggaatg aaagtgggaa
     8221 tgccgaccat ggccgtgact ggcgtgggca aagatatggt gcgcgatcag cgttatttct
     8281 cgctcgcgac tcgaatcgcc gctgaaatgg gggcgcaaat tatcaaaacc tattatgtcg
     8341 aaaaaggttt tgaacggatt gttgccggat gtccggtacc cattgttatt gctggcggta
     8401 aaaaattacc ggagcgcgag gcgctggaaa tgtgctggca ggctatcgat cagggcgctt
     8461 ctggtgtgga tatggggcgt aatattttcc agtctgacca tccggtggcg atgatgaaag
     8521 ccgtacaggc ggtggttcac cataacgaaa cggctgatcg ggcatatgaa ctctatctga
     8581 gtgaaaaaca gtaactgcgg atttaaggag aagaattatg cacgtcacac tggttgaaat
     8641 taacgttcat gaagacaaga ttgacgagtt tatcgaagtt tttcgccaga accacctggg
     8701 ctctgtacag gaagaaggca atttgcgctt cgatgtctta caggacccag aagtgaattc
     8761 gcgcttttat atctacgaag cctataaaga tgaagacgca gtggcattcc ataaaaccac
     8821 gccccactac aaaacctgtg tcgcgaaact ggaatcttta atgaccgggc cgcgtaaaaa
     8881 acgtctgttc aatgggttga tgccgtgagg cgaattcatc agttttatct acaattgggg
     8941 taacgcgctg acgggagtaa ataaatgtct gactggaacc cctctttata tctgcacttt
     9001 gccgctgaac gatcgcgtcc ggcggtggag ctgcttgcca gagtaccgct ggagaatatc
     9061 aaatacgttg ccgatcttgg ctgtggccca ggtaacagca ccgccctgct gcatcaacgt
     9121 tggcctgcgg ccaggataac aggcatcgac tcgtctccgg cgatgattgc tgaagcgcgc
     9181 agtgctttgc cagactgcca gttcgtggaa gcagacatcc gcaactggca accggaacag
     9241 gcactcgatc tgatttttgc taatgcctca ctgcaatggc tgcccgacca ctacgaattg
     9301 tttcctcatc tggtttcttt acttaatccg cagggcgtgc tggcagtaca gatgccagat
     9361 aactggctgg agccgaccca tgtgctcatg cgcgaagttg cctgggaaca aaactacccg
     9421 gatcgcgggc gtgagccgtt ggctggcgtt catgcttact acgatatttt gagcgaagcc
     9481 ggatgtgagg tcgatatctg gcgaaccacc tactatcacc agatgccgtc acaccaggcg
     9541 attatcgatt gggtgactgc cactggatta cgtccgtggt tacaggatct gaccgagagc
     9601 gaacagcagc tttttcttaa gcgctaccat cagatgctgg aagagcagta tccactgcaa
     9661 gagaacggac agatactgct ggcatttccg cgtcttttta ttgttgcccg gcgtatggag
     9721 taaatatcac gtcagctggt aatgacgatc gggaagaatt tttgctggaa tttcggcttc
     9781 atcgttcatc tgtaacaggt caatttcaat agcgttgcag atggcatcca gcggtaaatc
     9841 attgttttca gtaccgaacg gatcttccag ttcttccgcc agacaatcca gcgaaataaa
     9901 agtgtaggaa atcagcacag agataaaagg cgtcatgtaa tgcaggtcca cgaccagcgc
     9961 gaacggcagc atgatacaaa acagataaac ggtacgatgc aaaatcaggg tgtaggcaaa
    10021 gggaattggc gtataggcaa tgcgctcgca tcctgccagg accgctgaaa tatcattaag
    10081 ccgatcgttg aggctaataa acaggatatc tgaaagctgc ccattgcggc gctgaaccgc
    10141 caaccactcc cccattatta acaagatacg gttagctgga gagttcgaag ccagtacagg
    10201 ctgaagatct tcagtcttga gataatgagc cagcacttcc gcctgtggct gtttgcgtaa
    10261 tgtcatgcgt aaacagtggg cgaaggcgat ttgcaaccgg gcaaactccc ttacacttgc
    10321 cgaatccggc aatgtcgttt ttacctcgcg cagtaacgac cgtgaggcaa tcatcaactg
    10381 cccccaaagt tttcgcgctt caacgtaacg ggcgtacccg gcattattac gaaaaccaag
    10441 aaaaatggcg atggcgacac cgagaatgct gaacggtgcg agggtgaatt tgatgcccag
    10501 atgcgtgtac cagggcagca tgaaaataac agcgatagaa aagagaaaat tgagtagtaa
    10561 gcgcgatgat atcttggata atactgagcc gtgccagaca aaaatacggc gcagccagtg
    10621 ttgttgtgga cgaacaatca tggttatctt caggcgtgaa aaagtcgccc tattaaacgt
    10681 gattacgatc acattctcaa gacgctactt acaaattacc tacaagctta caacattaac
    10741 aggcgctgca tgtggcatct gttaatgata aaggcacata ggatgttgta actaatatag
    10801 tgaaataaga aacccggtcg aaaccgggtt cagaagtaac ggtgttatta gcacaacgga
    10861 cgtacagctt cgcgcatccc tttttcaaga atcgcatcca ggtcattagc aacctgctcg
    10921 accagaccag gcacttgcgt caggtcctgc tcccagtggt ctttttctgc caacacaatc
    10981 gctaccagtt cctgggtacc gataacacgg tcacgatgct ggctccagag ttgctgataa
    11041 cgttccagcc agtgtgcatc gtcctgtacc ggatatgttt ctccgttacg ctcaccacga
    11101 tagaaggcaa tcaatgccgc taatgcgaaa gtaaggcgcg ccggaagtgt gccttttgcc
    11161 ttctgccctg ccagcagctg cggcaggatg cgagtgcgga acttggtcat accgttgagc
    11221 gcgatagaca gcagctgatg cttaatgtac gggttacgga aacgcccggt gactgcactg
    11281 gcgaaagatt ccagttcatc acgaggcaaa tccagtaccg gaataatttc ttcgtagata
    11341 gctttttcaa cgaatgcgca aatttcagca tcgttcatcg cttcacctac ggtatccagc
    11401 cctgcctgga acgccaccgg caccagcgcg gtgtgcgcac cgttgaggat tgccactttg
    11461 cgttctttgt acggtttaat atcgtcaaca atcagcacgt tgagcggata tttgtccaga
    11521 cgcagttcag tcgctaagga tttcggcccc tgaatcacaa acaggtaaaa gtgttcagcg
    11581 gtgtcgagga aaccatcgtg ataacccagt tcttcttcca gtttagccac ttcatcgcgc
    11641 ggataaccgg taacgatacg gtccaccagc gtagaacaga agctgttagc ctgatccaac
    11701 cattgaataa atgcttctgg cagtgcccac tcttgagcat agcgcagcac cagttcacgc
    11761 aacgcgtcgc cattgtagtc gatcaactca cacgggatga tgatccaacc tttatccagc
    11821 gcaccgttga aatggctaaa acgttcgaac agcagacggg tcagttttgc gggatagctt
    11881 accgctggcg cgtcatcgaa tttatcgccc gcatggtagc tgatacccgc ttcggtggtg
    11941 ttagagaaaa caaagcgcat ttccggattg tgcgccagtt tcaggaattc atcgtattca
    12001 ctgtagacgc tgatttcacg attaacagag cgaatcagac gcgcgtcgct gaccgcttcc
    12061 cccttctcat tcaggccacg gataatggtg gtgtacagac catcctgcgt gctcagtgac
    12121 ggcgggaatg aagtttcaat cggacgaaca acgaccacgc cagaattcag atcggtgtgc
    12181 tcattcagga gatcgatttg ccagtcaaca aaggcgcgca ggaagttacc ttcaccaaac
    12241 tgaatgatac gttctggata ctgtgcaccg ggaaaatcgc gacgatttag tgttttcaca
    12301 atgggttccc ttctgattag tcatacaacc tgtttgaatt ggtacgacag gttagcaaac
    12361 tttaatacgc cgaacccctg ttttgatcaa ctcctgatga ttaatgagca gttttatgag
    12421 aaaagtgtgg cgcggatcat ggtttaatcg aggaaatacg ccttttcctg gatcataaag
    12481 tggtagaaca cattgcattc aaatcgcgcg gaatgaataa agatgtcaga caacttcctc
    12541 accgtaacgc atagtgctgg tacggttgcg cccatctttc ttcgagcgat acagacacgt
    12601 atcggcttcg accatcaatt tattaaaatc atcggtcagc gttcggtacg atgcgcgacc
    12661 actaccgacg ccaatactta ccgtgagata aagcgttttt tgttgccagg tgaatggttg
    12721 cagttcaacg cctttacgga ttttttccgc cattagcaga ccatcgacag gattcaccga
    12781 cggcactgca acagcaaatt cttcgccgcc catgcgcgcc accagcccct tatcaccgac
    12841 aatcttctga atatgccggg caaacacgct taacacttta tcgccacatt catgtccata
    12901 gttatcgtta atgcttttga aatagtcaat atcaagcagc atgaccgtca gatgttgtgt
    12961 ctgtttcagc gatggacttt tcagcgcctc ataaagaccg gaccgtgagt aaacctgagt
    13021 cagaaaatca aagtcggctc gcagcgcaac ttgcttcatt agcgaattga tcgctgccac
    13081 gctaaaagaa accataattg ggcatatcgc catcgtggca ataccgagac gtgcggagaa
    13141 catttccgga atggagaacg gcgaaccgac cgagatatca atcaccgaat ttgccaccag
    13201 tacgatttcc accgcaccgg tgacaaaggt caacagacat gttacctgcg gcgtatagcg
    13261 cactgcacac cagattaatg caggcagcgg gaacgccaga ctccccgctc cgccaatgac
    13321 taccgaggca ataaccgaca caataagcgc gatggcgggc atcatctgtt ctgctttaaa
    13381 gcgcggcagc actccaggaa tagccaacgt cagcatacaa ggcacgatca aaacgcccgt
    13441 tgagaattgc tcactgaacc agtccgcaag caaaggccag aaatccagac tatcaatact
    13501 gaccgaacca atcgccccga caatagcgca taataatgcg gcaatcagac agtaattaaa
    13561 tagccgtaag gcacttactg gctcatactt atttttcccc agacgcttat cccgcacgac
    13621 cagtaaggcg acggtaacaa taaacatcat attggagaaa ttgataacca gtgaaaccag
    13681 tccccattcg gtggttatgg catcataaac cagcatcgcc acataactga tcgcatagta
    13741 atgcagtcga ttaagccaga catagcgggc aaacaccccc gccattacgc cattcagcgg
    13801 ccagaaaaga gaaagttcgt gaaccagccg taactctgca ccaataaaat agaacagcgt
    13861 ggttagcgca aaaatagcga tgctattacg tagcagatga ccttcctgga acaaacggaa
    13921 agttgaaatg gggtgtacat gcattaatta tctgtccata caattgcggg tggcaattat
    13981 ctcaacgtaa taagtaaatt ctcataaagg atagcatgtt cgctaacagc ggcggcaaat
    14041 aaaggtaccc tgggaatgct attttatcgt tttccgcaat tctcatggct gattcatctg
    14101 tacaaccagc cagtgataga ttaccgccac gatataacgt tgttgttctt cgcttaacga
    14161 aacaccctgc ggaatgttat gccacttagc cagacaaccg cgacagcagg tcgcggtggc
    14221 gtgctgagcg ataaacaccg gatgcccgcg catgggggtt tgcttaccgt cattagccgg
    14281 taatgccgga gcaagacgtt tagcgacaaa atccgccgca tgttgttcga tgactggcgc
    14341 gcctttctcc aggcaatact gacgctcttt catgcccaga cgaaagcgag agcgaaattt
    14401 tgaacgggat aaacgcgcga agagtggatc gagggactgc attaataaac cgaacgccct
    14461 aactgtttcg tcaattgttc aaggacggca atacccgcaa gcgagttacc tgcatcatcc
    14521 agttccggac tccagacagc gatggccatt tcatgcggaa caatcgccac aataccgcca
    14581 ccaacgccag atttcgccgg tagccccacc cgccaggcaa actcccccgc gttctggtac
    14641 ataccactgg tcgccatcag cgcgttaatt tgccgcgcct gcattggcgt caccacaggt
    14701 tcatcaatat gaatagcttt cccctgatta gccagaaaga caaacgtccg ggccagctct
    14761 acacagctca ttttcagagc gcagtaatga aagtagtttt gcagaacggt tgtcacatca
    14821 tgatggaaat tgccaaacga cttcatcagc caggcgatag ccgcatttcg cgcggaatgt
    14881 tcaaattcgg aacgcgctac caccgtatcg tatgaaatat cagacacacc gcttaagccg
    14941 cgcacgactt ccagcatacg ttgccgtggt gcgcttaatc gcccttgcaa catatcgcag
    15001 accaccagcg caccagcatt aataaacgga ttacgcggaa taccctgctc catttccagt
    15061 tgcactaaag aattgaacgg tgatccagac ggatctttgc cgacgcgttg ccagatttcc
    15121 tcttcggagt aatgacgcat ggcgacaacg agactcagca ctttggaaat agactgaatg
    15181 gaaaaacgtt cttgcgcgtc tccggcctga aaaagctgtc cgtcaacggt acagatagca
    15241 atgcccaatc gggaaccgtc tactgtagcc agcgccggaa tataatccgc gactttaccc
    15301 tgaccaatga gcggccgcac ttgccgcaag atgttttcta aaattgcatt atccatggcg
    15361 actgccactt tctactcctg gaccgcaggt ctgaaaagac ctgcgagtat atcagagctg
    15421 aatatgtcgc gtcagatccg gtctttccac accgtctgga tattacagca ttcgtgtaag
    15481 ccgaaatggg aaagctcacg accaaagcca ctctttttca cgccaccaaa ggccactcgc
    15541 gcgtcgctgg cacaataacc attgataaac accccaccgc attccagacg tgccgccatc
    15601 tgtctggcct gtgtttcgtc ggtggtaaaa atggtcgctg aaaggccgaa ctcactatca
    15661 ttagccagtt ccagcgcatg ttctgcatct ttcgcaacgg tgattgccgc aacagggcca
    15721 aacatttctt cccgaaacgc ggtcatttct ggggtaacat tcgccagaac cgttggcgga
    15781 tagtagttac ctgccccagc catcttttcc ccgcccagta acaaacgcgc accctgcgcc
    15841 agggttttct ccacctgatg atgcagctca tcacgtaaat caaaacgagc cattggtccg
    15901 agagcgttct cttcatcacg gggatcgccc attttcaagg ctgccgcagc tgccacaaaa
    15961 cgttcggtaa atgcagaagc aattccctct tcgataataa agcgttttgc cgctgcacaa
    16021 acctgtccgg tattctgata acgtccggct accgccgctt taaccgccag ttccagatcg
    16081 gcatcgttaa gcacaataaa tggatccgaa ccgcccagtt ccagtacgca ttttttcagt
    16141 gccgctccag cctgtgcgcc aatagccgct cccgcacgaa cacttccggt caccgtgaca
    16201 gcagcaatgc gcgaatcttt aatcatttga ctgacaccgt cgttgtcggc attcagccag
    16261 ccatatacgc cttgcgggat tcccgcatct ttaaacacct gggcaatgag ctgagcacag
    16321 cccatcacat tcggcgcatg tttaagtaag tagccgttac ctgcaagaat gatgggaacc
    16381 gcgccacgca tcacctgcca taacggaaag ttccacggca taatcgccag aatcgtcccc
    16441 aacggtcgat actcaataac tgcctgctga ttttccacca gcgtaggttc cgccttcagc
    16501 attgccggac catgttctgc ataccagtca cacaaattcg ccgatttcgc cacttcagcg
    16561 cgcgcctgat tgattggttt gcccatttca cgggtgatca tttgcgccat ttcttcgcta
    16621 cgggcgcgca gagccttacc gataccacgc agtttttcag cacgataatc tatatttgtc
    16681 tcgcgccagt cgcgaaagcc tgctgccgcc agctgaagtg cgttttcgat atcgttagcg
    16741 ccagcccaag gcagcacaga aagttgttca cccgtggcag gatttattga aattgcatga
    16801 gttgccggag taatggtcat cggggtatct cctttatgag tcatggtatg aagatacgca
    16861 gatttactct tgctttaaaa tgaataatat taagccactt attcacgaat cgagaatgtt
    16921 atggatctga cccaactgga gatgttcaac gcggttgccg aagctggcag cattacccag
    16981 gctgcagcaa aagtgcatcg cgtaccgtcg aatctcacta cccgtctacg ccagctggaa
    17041 acagaactgg gggtagatct gtttattcgc gagaatcagc gtttacgtct ctctcctgcc
    17101 gggcataact ttttacgcta tagccaacaa attctcgcgt tagtggatga agcgcggagc
    17161 gttgtcgctg gcgatgagcc gcaaggttta ttttctcttg gttcgctgga aagcaccgca
    17221 gcagtgcgca ttccggccac gctggcggaa ttcaaccatc gttatcccaa aattcagttt
    17281 tcactttcca ccggcccttc cggcactatg ctggaaggag tgctggaggg aaaactgaat
    17341 gcggcattta ttgatgggcc cattaaccat actgccattg acgggatacc ggtataccgc
    17401 gaggagctga tgatcgtcac gccacaaggt catgcgccag taatccgcgc cagtcaggtt
    17461 aacggcagta acatttatgc cttccgcgcc aattgttcgt atcgtcgcca cttcgagagc
    17521 tggtttcatg ctgacggtgc cgctccggga actattcacg agatggagtc gtatcacggg
    17581 atgttggcct gtgtggtcgc aggagcaggc attgcgctta ttccacgctc tatgctggaa
    17641 agtatgccgg ggcatcacca ggttgaagcg tggccgttag ctgagcaatg gcgttggtta
    17701 acaacctggc tggtctggcg tcgcggtgcg aaaacgcgtc cgcttgaggc atttattcaa
    17761 ctactggatg tgcctgactc ggcaaaacag ggttaccaat gagctatttt tgatagttct
    17821 tgcagctcaa atgccctata tagtgatgtt ccgatgactt atgactatat ggggcaaata
    17881 tggttacgcc agtaagcatc agtaattaca tatctcttcc tgatgatttt cccgtacgta
    17941 atattgcacc tcaggtaaaa gaagttttaa aggactttat tgatgcgcta agtacaataa
    18001 tatgtgatga agagtggcgc acgtctttaa acatcaactc agccacaaaa aagatattta
    18061 ataaccttga taacttatca tatattcaga ggacttcttt tcggggtaac gacacgctat
    18121 acaatgaaaa ggttcagttt aaactcactt atccagtcaa gaatggaaga cacaaataaa
    18181 atattgaatt tca
//
LOCUS       DAPGWB010000090        17867 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.090, whole genome shotgun sequence.
ACCESSION   DAPGWB010000090 DAPGWB010000000
VERSION     DAPGWB010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17867
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.090"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            185..910
                     /locus_tag="RHX79_002922"
     CDS             185..910
                     /locus_tag="RHX79_002922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV2198072.1"
                     /translation="MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL
                     TLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLM
                     CPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERK
                     VLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELN
                     LPSVYGDAAEWNTAELRREMSHS"
     gene            868..1545
                     /gene="bglJ"
                     /locus_tag="RHX79_002923"
     CDS             868..1545
                     /gene="bglJ"
                     /locus_tag="RHX79_002923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator BglJ"
                     /protein_id="HDV2198073.1"
                     /translation="MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQ
                     ESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLI
                     GSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREI
                     LRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCEA
                     SNVLHPY"
     gene            complement(1583..2371)
                     /gene="fhuF"
                     /locus_tag="RHX79_002924"
     CDS             complement(1583..2371)
                     /gene="fhuF"
                     /locus_tag="RHX79_002924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-iron reductase FhuF"
                     /protein_id="HDV2198074.1"
                     /translation="MAYRSAPLYEDVIWRTHLQPQDAGLAQAVRATIAKHREHLLEFI
                     RLDEPAPLNAMTLAQWSSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGL
                     MVPPLMLALLTQEKALDVSPEHFHAEFHETGRAACFWVDVCEDKNATPHSPQQRMETL
                     ISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEK
                     TLSTGEDNPLWRTVVLRDGLLVRRTCCQRYRLPDVQQCGDCTLK"
     gene            2512..2748
                     /locus_tag="RHX79_002925"
     CDS             2512..2748
                     /locus_tag="RHX79_002925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1435 domain-containing protein"
                     /protein_id="HDV2198075.1"
                     /translation="MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTP
                     VMLYHKQLRHYVLLPSCLALIAGIMLMIMNLNQG"
     gene            complement(2787..2873)
                     /locus_tag="RHX79_002926"
     tRNA            complement(2787..2873)
                     /locus_tag="RHX79_002926"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2837..2839),aa:Leu,seq:cag)
     gene            complement(3141..4172)
                     /gene="rsmC"
                     /locus_tag="RHX79_002927"
     CDS             complement(3141..4172)
                     /gene="rsmC"
                     /locus_tag="RHX79_002927"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HDV2198076.1"
                     /translation="MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRA
                     HTQQFHHWQVLSRQMGDNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLMNLLSLL
                     PVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWG
                     EYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS
                     PKIRLTLCDVSAPAVEASRATLAANCVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQ
                     TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRA
                     IMTRQAKKG"
     gene            4275..4688
                     /gene="holD"
                     /locus_tag="RHX79_002928"
     CDS             4275..4688
                     /gene="holD"
                     /locus_tag="RHX79_002928"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HDV2198077.1"
                     /translation="MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVAN
                     DLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQ
                     VASPALTELRANPTARAALWQQICTYEHDFFPRND"
     gene            4657..5103
                     /gene="rimI"
                     /locus_tag="RHX79_002929"
     CDS             4657..5103
                     /gene="rimI"
                     /locus_tag="RHX79_002929"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HDV2198078.1"
                     /translation="MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQ
                     LTQNGKMAAFAITQVVLDEATLFNIAVDPDYQRQGLGRVLLEHLIDELEKRGVATLWL
                     EVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM"
     gene            5118..5795
                     /gene="yjjG"
                     /locus_tag="RHX79_002930"
     CDS             5118..5795
                     /gene="yjjG"
                     /locus_tag="RHX79_002930"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HDV2198079.1"
                     /translation="MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQA
                     VNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVS
                     LLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYAL
                     EQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHEL
                     EQLLCKH"
     gene            5886..7475
                     /gene="prfC"
                     /locus_tag="RHX79_002931"
     CDS             5886..7475
                     /gene="prfC"
                     /locus_tag="RHX79_002931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HDV2198080.1"
                     /translation="MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAG
                     TVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRT
                     LTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVEN
                     ELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAA
                     VGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWA
                     PAPMPRQTDTRTVQASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQV
                     RTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPN
                     FAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVV
                     SRLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSM
                     VNLRLAQERYPDVQFHQTREH"
     gene            7868..8473
                     /gene="osmY"
                     /locus_tag="RHX79_002932"
     CDS             7868..8473
                     /gene="osmY"
                     /locus_tag="RHX79_002932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone OsmY"
                     /protein_id="HDV2198081.1"
                     /translation="MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVD
                     SSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEA
                     VKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVE
                     TTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK"
     gene            8600..8761
                     /locus_tag="RHX79_002933"
     CDS             8600..8761
                     /locus_tag="RHX79_002933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HDV2198082.1"
                     /translation="MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLV
                     SLFMGRKRP"
     gene            8883..9956
                     /locus_tag="RHX79_002934"
     CDS             8883..9956
                     /locus_tag="RHX79_002934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HDV2198083.1"
                     /translation="MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLD
                     EFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGN
                     LIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
                     RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQ
                     WFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIAL
                     GSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVAND
                     TLVAEVSDAPQANDPTFNNEDLA"
     gene            9953..10735
                     /locus_tag="RHX79_002935"
     CDS             9953..10735
                     /locus_tag="RHX79_002935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313363.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDV2198084.1"
                     /translation="MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAE
                     NFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGEIGLDL
                     FGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPCTGVVHGFS
                     GSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQG
                     QANRPEQAARVFAVLCELRSEPADEIAEVLLNNTYAVFSVSG"
     gene            complement(10848..11711)
                     /locus_tag="RHX79_002936"
     CDS             complement(10848..11711)
                     /locus_tag="RHX79_002936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjW family glycine radical enzyme activase"
                     /protein_id="HDV2198085.1"
                     /translation="MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTM
                     GRCNDCGECVPQCPHQALQIVDGKVVWNAVVCEQCDTCLKRCPQHATPMAQSMSVDEV
                     LSHIRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETG
                     WEKLLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSICLLAERGKLAELRLLVIPGQ
                     VDYLQHIEELAVFIKGLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRG
                     VSRLIFPALYL"
     gene            complement(11683..13233)
                     /locus_tag="RHX79_002937"
     CDS             complement(11683..13233)
                     /locus_tag="RHX79_002937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HDV2198086.1"
                     /translation="MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQL
                     PAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLL
                     TILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDVRIKRFWRYLDRTLPDAFMHA
                     NIGPSDSPITRAILRADAELKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIAN
                     GPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYC
                     QQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYGLAEAVNLLCKKEG
                     IAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGAR
                     LPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMRE
                     FTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISH
                     EQQMRFSQ"
     gene            13491..14270
                     /gene="deoC"
                     /locus_tag="RHX79_002938"
     CDS             13491..14270
                     /gene="deoC"
                     /locus_tag="RHX79_002938"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005097947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDV2198087.1"
                     /translation="MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTA
                     AICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVD
                     VVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIK
                     AGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI
                     ADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY"
     gene            14397..15719
                     /gene="deoA"
                     /locus_tag="RHX79_002939"
     CDS             14397..15719
                     /gene="deoA"
                     /locus_tag="RHX79_002939"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313368.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HDV2198088.1"
                     /translation="MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAM
                     TIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMV
                     AACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSL
                     APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSE
                     ALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVT
                     MALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYL
                     PTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQ
                     VDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE"
     gene            15771..16994
                     /gene="deoB"
                     /locus_tag="RHX79_002940"
     CDS             15771..16994
                     /gene="deoB"
                     /locus_tag="RHX79_002940"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HDV2198089.1"
                     /translation="MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEAD
                     NGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGH
                     WEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEH
                     MKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIG
                     DKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKAT
                     GLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMS
                     LLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLA
                     KYFGTSDMEYGKAMF"
     gene            17074..17793
                     /gene="deoD"
                     /locus_tag="RHX79_002941"
     CDS             17074..17793
                     /gene="deoD"
                     /locus_tag="RHX79_002941"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDV2198090.1"
                     /translation="MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVR
                     GMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLR
                     DVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLF
                     YSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAER
                     QTTFNDMIKIALESVLLGDKE"
BASE COUNT         4313 a         4524 c         4796 g         4234 t
ORIGIN      
        1 ttatcatttg atgctaacct tctgacacat gcagtggagt tgttgtgcag caggagtatg
       61 ctgatatgaa agtgaatgct aaggataatt tattcgctta atctattaat ttgctggaaa
      121 catttaagga atgaatatcc tgaataaacc atcatgattt ttagacagtg gatgtggagg
      181 aaatatgttg ccaggatgct gcaaaaatgg aattgttatc agtaaaatac ctgttatgca
      241 agcagggtta aaagaggtca tgaggactca cttccctgaa tatgaaataa tatccagcgc
      301 ctctgcggag gaccttacct tattacaatt acgtcgttcc ggattagtca ttgctgattt
      361 agccggtgaa agtgaagatc cacgttctgt ttgtgaacat tattattctt taatctcaca
      421 atatcgggaa attcactggg ttttcatggt gtcacgctcc tggtattccc aggcagtaga
      481 attgctcatg tgccctacgg cgacgttatt gtctgatgtt gaacccattg agaatctggt
      541 caagaccgta cgttccggca atacgcacgc agagcgtatc agcgccatgc tgacctctcc
      601 ggcaatgact gaaactcatg attttagcta tcgctccgtc attctcactc tttcagagcg
      661 caaggtactg cggctattag gtaaaggatg gggcatcaac cagatagctt cgttgcttaa
      721 gaaaagtaat aaaactatca gcgcccaaaa aaacagtgcg atgcgtcgac tggcaattca
      781 cagcaacgct gaaatgtatg catggataaa tagcgcgcag ggtgcaagag aacttaactt
      841 gccttctgtt tatggagatg ccgcagaatg gaacacagcc gaattaagaa gagaaatgtc
      901 gcactcatag aaaaatgcgt catgagcagt atcggtattg agagtttatt cagaaagttt
      961 gcgggtaacc cttataagct ccatacctat accagtcagg agtcatttca ggatgccatg
     1021 tcgcggatct cgtttgcggc ggtcattttt tctttttctg ccatgagaag tgagcgcaga
     1081 gagggattat cttgcctgac tgaactggcg attaagtttc cgcgtacccg gcgtttagtt
     1141 attgcggatg atgatattga agctcggctg attggttcat tgtcgccatc accgctggac
     1201 ggtgtattaa gtaaagcgtc aacgctggag atttttcatc aggaactctt tttgtcatta
     1261 aatggtgtac gtcaggcgac cgaccgactg aacaatcagt ggtacattaa ccaaagccgg
     1321 acgctaagcc cgacggagag agaaatattg cgctttatgt cgcgtggcta ctcaatgaca
     1381 caaattgccg agcagcttaa acgcaatatc aaaacgatcc gtgcacataa atttaatgtg
     1441 atgtcgaaac tgggcgtcag ttctgatgca gggttgttgg aggccgcaga tattctgtta
     1501 tgtatgcggc attgcgaagc aagtaatgtg ttgcatccct attaatccgc attatgccgg
     1561 gtttacttcc ccggcagtgc tttcatttca gcgtacaatc gccacattgc tgcacatccg
     1621 gtaagcgata acgctggcag caagtgcggc gcaccagcag gccgtcgcgc agtaccacgg
     1681 tacgccagag tggattatct tcaccggtag aaagcgtttt ctcaaaaaag agggcatggc
     1741 gcagcgattc aaccgtcgcc tcgccgagca gttgcttcat ctcagtgaga taccagttga
     1801 tcaaataacc ggtattactc cagataagtt tgccgttgat ctctccggtc gcttctagtg
     1861 cctgcacaac cggaaccagc gcctggctga ttaacgtttc cattcgctgc tgcggcgaat
     1921 gtggtgttgc gtttttatct tcacacacat cgacccagaa acaggcggca cggccggttt
     1981 cgtgaaactc agcatggaaa tgttccggcg acacatctaa tgccttttcc tgcgtcagta
     2041 gcgccagcat taatggtggc accatcaggc cgatatacca ttgtgcccat agcgagatca
     2101 gcggtttgtt ctcgcggatc atcgttggtt ggttgcgata gatatgatcg gaatagaccg
     2161 cgagtagaga acttagcgca ttcggtgatg accattgcgc cagcgtcatg gcgttaagcg
     2221 gagcgggttc atccaggcgg ataaactcca gcaaatgttc acgatgtttg gcgatcgtcg
     2281 cacgtacggc ttgtgcaagc ccagcatcct gtggctggag atgcgttcgc cagataacat
     2341 cttcatagag cggtgcggaa cgataggcca taatcgggat agtaatctaa atgataatga
     2401 ttgctaatcc tagcgatagg tttatccgat agcaagggat ttctctggct tgcaaatgat
     2461 aaaaattatc atatgatatt ggttatcatt atcaatgaaa gagatgaaac catgttgcaa
     2521 cgtacgctgg gcagtggctg gggagtgttg ctgccaggat tgctgattgc agggctgatg
     2581 tatgcggatt tatcgcctga tcaatggcgg attgtcattc tgatgggatt agtattgacg
     2641 ccggtgatgc tgtatcacaa acagttacgg cattacgttt tgctaccatc gtgcctggcg
     2701 cttattgctg gcatcatgct gatgataatg aatttgaatc agggatgaaa aatcaaggaa
     2761 gaaacaagaa aggaagtaaa gataattggt gcgagggggg ggacttgaac ccccacgtcc
     2821 gtaaggacac taacacctga agctagcgcg tctaccaatt ccgccacctt cgcataccat
     2881 caattcttaa aaagaattgc taccacggag gcgcattcta gtggttttca gcttttcgtc
     2941 aatagttaat tatcgccgga ggtgtaattg ctggaaaaat gtccatcagg aaactagcgt
     3001 gcaggtttgg taggcatgcg ggggcagatg ccagatgcga cgctggcgcg tcttatctgg
     3061 cctacgaagg gctaacgtgc aggttttgta ggtcggataa ggcgttcacg ccgcatccga
     3121 cacggtattc ggcgagataa ttaacctttc ttcgcctggc gggtcataat ggcgcgatac
     3181 accttgaaac gcccggtttg cgcaatcact tcatggaagc caaatgtctc atccagcacg
     3241 tccgggtaag gcaggaaggc gttcgctaca attcgcagct cgccgccgct attaagatga
     3301 cgcaccgcgc cgcgaatcag cgtttgcgcc gcatccaggc tggtttgcat cccatcgtgg
     3361 aacggcgggt tggagatgat catatcaaaa cgacctttca cctcggaaaa gacgttgctg
     3421 gcaaagactt caccttcaac acagttggcc gcaagtgttg cgcggctggc ttctaccgct
     3481 ggcgcagaga catcgcacaa ggtgagacga attttcggcg aatggcgcgc aaaggcaact
     3541 gaaagcaccc ccgcgccaca gccgacatcc agcactttac ctttcgtgtg cggagttaac
     3601 gtcgagagca gcaactggct accgacatcc agaccgtcgc ggctaaacac gccaggcagc
     3661 gttttgaccg tcaggccatc gacgctgtat tcgccccaga atttatcggc atcaaatacc
     3721 ggctgttttt ccagacgacc aaaatagagg ccacagcgac gagcgctgtc gactttattc
     3781 aacggcgcat aatctgccag catctgctcg gcgctgcgca cgccgctgcg gttctcgcca
     3841 acgacaaaaa tatccgtccc caccggcagc agagaaagta aattcatcaa ctggaactgg
     3901 gcttccggtt tgttcttcgg ccagtagtaa atcagcgtat cgcaatctgc gacgtcatcc
     3961 gccgtggcga ccagactgaa acgggcgtta tcccccatct ggcggcttaa tacctgccag
     4021 tggtggaatt gctgggtatg agcacggctg gccgcggtat ctaaacgcgc gggcaggtca
     4081 tcctgtaagt ctccggcaaa cagaatacgg ctttgttcga aatcatcact gtgacgcagc
     4141 aagacttcac ttgccggggt aaatgcagac atggaatgct cctcaattga tactggcggc
     4201 gattatagcc atatgttggc gcggtatcga cgaatttgct atatttgcgc ccctgacaac
     4261 aggagcgatt cgctatgaca tcccgacgag actggcagtt acagcaactg ggcattaccc
     4321 agtggtcgct gcgtcgccct ggcgcgttgc agggggagat tgccattgcg atcccggcac
     4381 acgtccgtct ggtgatggtg gcaaacgatc ttcccgccct gaccgatcct ttagtgagcg
     4441 atgttctgcg cgcattaacc gtcagccccg atcaagtgct gcaactgacg ccagaaaaaa
     4501 tcgcgatgct gccgcaaggc agtcgctgca acagctggcg gttgggtact gacgaaccgc
     4561 tatcactgga aggcgctcag gtggcatcac cggcgctcac cgaattacgg gcaaacccaa
     4621 cggcacgcgc cgcgttatgg caacaaattt gcacatatga acacgatttc ttccctcgaa
     4681 acgactgatt taccagcggc ttaccacatt gaacaacgcg cccacgcctt tccgtggagt
     4741 gaaaaaacct ttgccagcaa ccagggcgag cgttatctca actttcagtt aacgcaaaac
     4801 ggcaaaatgg cggcgtttgc gattacgcaa gtggtgctgg atgaagctac attgttcaat
     4861 attgcggtcg atcctgacta tcagcgtcag ggattgggaa gggtgctgct ggaacatctg
     4921 atcgacgaac tggaaaaacg cggcgtggcg acactatggc tggaagtccg tgcctcaaat
     4981 gctgccgcca ttgccctgta cgaaagttta ggctttaacg aggcgacgat tcgccgcaat
     5041 tactacccca ccacggacgg tcgcgaagac gccatcatca tggcgttgcc aatcagtatg
     5101 taagacaagg tggaataatg aagtgggact ggattttctt tgatgccgat gaaacgctgt
     5161 ttacctttga ctcattcacc ggcctgcagc ggatgtttct tgattacagc gtcaccttta
     5221 ccgctgaaga ttttcaggac tatcaggccg ttaacaagcc actgtgggtg gattatcaaa
     5281 acggcgcgat cacttcatta cagcttcagc acgggcggtt tgagagctgg gccgaacggc
     5341 tgaaagttga agcaggcttg cttaacgatg cctttattaa tgcgatggcg gaaatctgta
     5401 cgccgttgcc gggcgcggtt tctctgctta acgccattcg tggcaacgct aaaatcggca
     5461 tcatcaccaa cggttttagc gccttgcagc aagtgcgtct ggaacggacg ggcctgcgtg
     5521 attacttcga tttgctggtg atttccgaag aagttggcgt tgctaaaccg aataagaaaa
     5581 ttttcgatta tgcgctggaa caggcgggca atcctgaccg ttcacgcgtg ctgatggttg
     5641 gcgacactgc cgagtccgat attctcggtg gcatcaacgc cgggcttgcg acctgctggc
     5701 tgaatgcaca ccatcgcgag caaccagaag gcatcgcgcc cacctggacc gtttcttcgt
     5761 tgcatgaact ggagcagctc ctgtgtaaac actgattgcc tcccccccgt tgatgggtaa
     5821 aatagccgca atttttcgtt ttcaacaagc gcggcgcgat gccgcttact caagaagaaa
     5881 gaattatgac gttgtctcct tatttgcaag aggtggcgaa gcgccgcact tttgccatta
     5941 tttctcaccc ggacgccggt aagactacca tcactgagaa ggtgctgctg ttcggacagg
     6001 ccattcagac cgccggtaca gtaaaaggcc gtggttccaa ccagcacgct aagtcggact
     6061 ggatggagat ggaaaagcag cgtgggatct ccattactac gtctgtgatg cagtttccgt
     6121 atcacgattg cctggttaac ctgctcgaca ccccggggca tgaagacttc tcggaagata
     6181 cctatcgtac cctgacggcg gtggactgct gcctgatggt tatcgacgcc gcaaaaggtg
     6241 ttgaagatcg tacccgtaag ctgatggaag ttacccgtct gcgcgacacg ccgatcctca
     6301 cctttatgaa caaacttgac cgtgatatcc gcgacccgat ggaattgctc gatgaagttg
     6361 agaacgagct gaaaattggc tgcgcaccga tcacctggcc aattggctgc ggcaagctgt
     6421 ttaaaggcgt ttaccacctt tataaagatg aaacctatct ctatcagagc ggtaaagggc
     6481 acaccattca ggaagtccgc attgttaaag ggctgaataa cccggatctc gatgctgcgg
     6541 ttggtgaaga tctggcacag cagctgcgtg acgaactgga actggttaaa ggcgcgtcta
     6601 acgagttcga caaagagctg ttccttgcgg gcgaaatcac tccggtattc ttcggtactg
     6661 cgctgggtaa cttcggcgtc gatcatatgt tggatggcct ggtggagtgg gcacctgcgc
     6721 cgatgccgcg tcagactgat acccgtaccg tacaagcgag cgaagacaaa tttaccggct
     6781 tcgtatttaa aattcaggcc aacatggacc cgaaacaccg cgaccgcgtg gcgtttatgc
     6841 gcgtggtatc cggtaaatat gaaaaaggca tgaagctgcg ccaggtgcgc accgcgaaag
     6901 acgtggtgat ctctgacgcg ctgaccttta tggcgggtga ccgttcgcac gttgaagaag
     6961 cgtatcctgg cgatatcctc ggcctgcaca accacggcac cattcagatc ggcgacacct
     7021 ttacccaggg tgagatgatg aagttcaccg gtattccgaa cttcgcacca gaactgttcc
     7081 gtcgtatccg cctgaaagat ccgctgaagc aaaaacagct gctcaaaggg ctggtacagc
     7141 tttccgaaga gggcgcggtg caggtgttcc gtccgatctc caacaacgac ctgatcgttg
     7201 gtgcggttgg tgtgctgcag tttgatgtag tggtatcgcg cctgaagagc gaatacaacg
     7261 ttgaagcagt atatgaatca gtcaacgttg ccaccgcccg gtgggtagaa tgtgcggacg
     7321 cgaagaaatt tgaagagttc aagcgtaaga acgaaagcca actggcgctt gatggcggcg
     7381 ataatctcgc ttacatcgct accagcatgg ttaacctgcg cctggcacag gaacgttatc
     7441 cggacgttca gttccaccag acccgcgagc attaattctt gcctccaggg cgcggcaacc
     7501 gcctcgccct gtcaatttcc cttccttatt agccgcttac ggaatgttct taaaacattc
     7561 acttttgctt atgttttcgc tgatatcccg agcggtttca aaattgtgat ctatatttaa
     7621 caaagtaatg acatttctga cggcgttaaa taccgttcaa tgcgtagata tcagtatcta
     7681 aagccgtcga ttgtcattct accgatatta ataactgatt cagaggctgt aatggtcgtt
     7741 attcatcacc catcgctttt gtgatggcga ccattgactt ctgtagaggg tgaagtctct
     7801 ccctattcag caatgcaacc tcgtgttgcc aggctcaaat tacgagcaaa catacaggaa
     7861 taaatcgatg actatgacaa gactgaagat ttcgaaaact ctgctggctg taatgttgac
     7921 ctctgccgtc gcgaccggct ctgcctacgc ggaaaacaac gcacagacta ccaatgaaag
     7981 cgcagggcaa aaagtcgata gctctatgaa taaagtcggt aatttcatgg atgacagcgc
     8041 catcaccgcg aaagtgaagg cggccctggt ggatcatgac aacatcaaga gcaccgatat
     8101 ctctgtaaaa accgatcaaa aagtcgtgac cctgagcggt ttcgttgaaa gccaggccca
     8161 ggccgaagag gcagtgaaag tggcgaaagg cgttgaaggg gtgacctctg tcagcgacaa
     8221 actgcacgtt cgcgacgcta aagaaggctc tgtgaagggc tacgcgggtg acaccgccac
     8281 caccagtgaa atcaaagcca aactgctggc ggacgatatc gtcccttccc gtcatgtgaa
     8341 agttgaaacc accgacggcg tggttcagct ctccggtacc gtcgattccc aggcacagag
     8401 cgaccgtgct gaaagtatcg ccaaagcggt agatggtgtg aaaagcgtta aaaatgatct
     8461 gaaaactaag taattcgtcg taattcgtcc tcccgaactt tgtcgggagg cgcgatgtgc
     8521 accacactaa aaatatcgca ttgagtgatt ttcacgctca tatcaagcgg tgacattaac
     8581 tatggtaaag gagacgctta tgtttcgttg gggcatcata tttctggtta tcgcgttaat
     8641 cgccgccgca cttgggtttg gtggtctggc cggtaccgct gcaggcgcag ctaaaattgt
     8701 ctttgtcgtc gggattattc tgttcctggt gagtttgttc atgggccgaa aacgacccta
     8761 gatttcagac cattaagaaa attttatcca aagccagtcc agcggactgg cttttgcggt
     8821 tttagcgaat aataaattgc gttactttgt cattctttca caacaaaaac aggaaggcag
     8881 aggtggggca gcgaatacct gtaacgcttg gtaatattgc gccgttgtcg ctaaggccgt
     8941 tccagcctgg acgaatagct ctggtgtgcg aaggcggcgg acagcgtgga attttcacgg
     9001 ctggcgtgct ggatgagttt atgcgcgcgc agtttaatcc tttcgatctt tatctcggca
     9061 catctgccgg ggcgcagaac ctctcggcgt ttatctgcaa tcagcccggt tacgcgcgca
     9121 aagtcatcat gcgctatacc acaaaacgcg aatttttcga tccattgcgc tttgtccgtg
     9181 gaggaaatct tatcgatctc gactggctgg tggaggccac cgcaagccag atgccgttgc
     9241 aaatggatac cgccgcgcgg ttgtttgaca gcggcaaatc gttttatatg tgcgcctgtc
     9301 gtcaggatga ctacgcgcct aattactttt taccaaccaa acaaaactgg ctggatgtga
     9361 ttcgcgcctc cagtgcgata cctggctttt atcgtagcgg agtgtcgctg gaaggcatta
     9421 actacttgga tggcgggatc agtgatgcga ttccggttaa agaggcggca aggcagggcg
     9481 ctaaaacgtt ggtcgtcatc cgcactgtgc cgtcacaaat gtactacacg ccgcagtggt
     9541 tcaaacgcat ggaacgctgg ctgggtgaca gtagcctgca gccgctggtc aatctggtgc
     9601 agcatcatga aaccagctat cgtgacattc agcaatttat tgagaaacca ccgggcaagc
     9661 tgcggatatt cgaaatttat ccaccgaaac cattacatag tatcgcgctt ggcagtcgga
     9721 ttccggcgct gcgtgaagac tataaacttg ggcgtttatg cggtcgttat ttcctcgcca
     9781 cggttggcaa gctattaact gaaaaagcgc cgcttacccg ccatctggtg ccagtggtga
     9841 cgccggaatc gatcgttatt ccgcctgcgc cagtcgccaa cgatacgctg gttgccgaag
     9901 tgagcgatgc tccgcaggcg aacgacccga catttaacaa tgaggatctg gcttgatttg
     9961 ccgttttatc gatacccact gccattttga tttcccgccg tttagtggcg atgaagaggc
    10021 cagcctgcaa cgcgcggcac aagcgggcgt aggcaagatc attgttccgg cgacagaggc
    10081 ggaaaatttt gcccgcgtgc aggcgttagc ggaaaaatat caaccgctgt atgccgcatt
    10141 ggggttgcat ccggggatgt tggaaaaaca tagcgatgtg tctcttgatc agctacagca
    10201 ggcgctggaa aggcgtccgg cgaaggtggt ggcggtgggg gagatcggtc tggatctctt
    10261 cggcgacgat ccgcaatttg agaggcagca gtggttactc gacgaacagc tgaaactggc
    10321 gaaacgctac gatctgccgg tgatccttca ttcccggcgt acacacgaca aactggcgat
    10381 gcatcttaaa cgtcacgatt taccgtgcac tggcgtggtt cacggttttt ccggcagcct
    10441 gcaacaggcc gagcggtttg tacagctggg ctacaaaatc ggcgtaggcg gtactatcac
    10501 ctatccacgc gccagtaaaa cccgcgatgt catcgcaaaa ttaccgctgg catcgttgtt
    10561 gctggaaacc gacgcgccgg atatgccgct caatggtttt caggggcagg ctaaccgccc
    10621 ggaacaggcc gcccgggtat ttgccgtgct gtgcgagttg cgctcggaac cggcggatga
    10681 gattgccgaa gtgttgctta ataatacgta tgcggtgttt agcgttagtg ggtagtttgc
    10741 ccttcgtagg cagcatccgg cagtcggcgc ataatgcctg atgcgacgct tgtcgcgtct
    10801 tatcatgcct acaggtttgt gccgaaccgt aggccgtatc cggcatgtca caaatagagc
    10861 gccggaaata tcaaccggct caccccgcgc acctttaacg catcagccaa cggctcaacg
    10921 tcttccggcg tggcgctcgc ccagctttgc gcctcgccat acacgccgtg ggcatgaaac
    10981 gcgttcaggc gtaccggaac atcgccaagt cccttgataa acaccgccag ttcttcgatg
    11041 tgttgcaaat aatccacctg gccagggatt accagcaaac gcagttccgc cagcttaccg
    11101 cgctctgcca gcaaacagat gctgcgctta atctgctgat tatcgcgtcc ggttaattgt
    11161 tgatgacatt cgctacccca tgctttgaga tcgagcattg cgccgtcgca caccgggagc
    11221 aatttttccc agccggtctc gctcaacata ccgttactgt ccaccagaca ggtgagatgg
    11281 cgcagttgcg gatcgttttt gatggctgta aatagcgcca ctacaaacgg cagttgggtc
    11341 gtggcttcgc cgccgcttac cgttatccct tcaataaaca gcaccgcttt gcggatatgg
    11401 ctaagcacct catccacgct catggattgc gccattggcg tggcatgttg cggacacctc
    11461 ttcaggcagg tatcacactg ctcgcaaacc acagcgttcc acaccacttt gccgtcaaca
    11521 atctgcaacg cctgatgtgg acactgtggc acgcactccc cacagtcatt gcaacgtccc
    11581 atcgtccacg gattgtgaca gtttttgcag cgcagattgc agccctgcaa aaacagagcc
    11641 agacgactgc ctggcccgtc aacgcaggag aaggggataa tcttactgac taaagcgcat
    11701 ctgctgttca tggcttatca cgcgcggctg gcgttccaga atacgagtgt tgcgtgcggc
    11761 ttcttcgccc agccaggtgg tgttggtgcg tgaaccttcg gcgcgatatt tttctaagtc
    11821 cgacaaacgc accatataac cggtaacgcg aaccagatcg ttaccgctga cattggcagt
    11881 aaattcacgc attccggctt taaaggcacc gaggcaaagc tgtaccagcg cctgcgggtt
    11941 acgtttgatg gtttcgtcga gcgtcagaat gtcgctgatg ccggaataat aataagcatg
    12001 atgcggggcg acagtttgca gatgggtgat cggatctggc tcatcgccat acggcaaacg
    12061 cgcgcccggc gtggtgccga tatcggaact gatccccgac tgtgcgtgta acatggcgcg
    12121 tttttgccag ccatatttca cgggggtatt ggcgacaaac tccgccagtt gcgcgctgat
    12181 gcgataaccc acttcatttg cggcggcttc tttaccgtag cgcgcggcaa tcccttcttt
    12241 cttacacagc aagttaaccg cttccgccag cccatacatg ccaaacattg gcacaaaacg
    12301 ttcagggtta atcagccctt ctttcaccag gaagctattc tcaaagaagt gtgattgttg
    12361 atagaggaat tcacaccgcg catcgatgat ggcgatctgc tgctggcagt agtgcggtag
    12421 agtgcgcgta aagaagtcat ccagcgattc gctgcgctcg gcaatggctt tcaggttaag
    12481 gcgtaccagc gtgctgccac cacccgccag cggcagtgag ttgtaacagc tcacaatccc
    12541 gtagccccct tttgtgaaaa ttttatcatg caccggaccg ttggcgatgt gcggtttgct
    12601 acattcacag atgttcttcg ccacttccag cagtaggtca tcaggggtga tttcaggatc
    12661 gtagataaag gtcaggttcg gtgaaacctg cttcaactct gcgtctgcac gtaagatcgc
    12721 gcgggtaatg ggcgaatcag atgggccgat attggcgtgc ataaaggcgt ctggcagggt
    12781 tctgtcgagg taacgccaga aacgttttat tcgaacatcg atctcgtctt gtgttagaat
    12841 tctaacatac ggttgcaaca acgcatccag ttgccccagg tagaccggca tcgatgtgac
    12901 cgacggtacg tggtggtaaa gaatggtcag cagagagagt gcgtcatcaa gatctttcgc
    12961 gccttccagc tccagccatt cggaaccgtt cgccagaaaa cgggcgtaat cgggtaagac
    13021 atagcgcggt ttgtacggcg catgaccttc aaacatatcg cagattacac cctcatccag
    13081 cgcgcggcgg gcttcggcag gaagctgtgg gtaaggcaga ttgttttctg cttccagagc
    13141 cagaaaatgg cgcttctgct ccgggctaag cactgggctg gtgacaattt gctggcaacg
    13201 ttgttgcagt gcattttcat gagaagtggg catcttcttt tccttttatg ccgaaggtga
    13261 tgcgccattg taagaagttt cgtgatgttc actttgatcc tgatgcgttt gccaccactg
    13321 acgcattcat ttgaaagtga attatttgaa ccagatcgca ttacagtgat gcaaacttgt
    13381 aagtagattt ccttaattgt gatgtatatc gaagtgtgtt gcggagtaga tgttagaata
    13441 ctaacaaact cgcaaggtga attttattgg cgacaagcca ggagaatgaa atgactgatc
    13501 tgaaagcaag cagcctgcgt gcactgaaat tgatggacct gaccaccctg aatgacgacg
    13561 acaccgacga gaaagtaatt gctctgtgtc atcaggccaa aactccggtc ggcaataccg
    13621 ccgctatctg tatctatcct cgctttatcc cgattgctcg caaaacgctg aaagagcagg
    13681 gcaccccgga aatccgaatc gctacggtaa ccaacttccc acacggtaac gatgacatcg
    13741 aaatcgcgct ggcagaaacc cgtgcggcaa tcgcctacgg tgctgatgaa gttgacgttg
    13801 tgttcccgta ccgcgcgctg atggcgggta acgagcaggt tggttttgac ctggtgaaag
    13861 cctgtaaaga ggcttgcgcg gcagcgaatg tactgctgaa agtgatcatc gaaaccggcg
    13921 aactgaaaga cgaagcgctg atccgtaaag cgtctgaaat ctccatcaaa gcgggtgcgg
    13981 acttcatcaa aacctctacc ggtaaagtgg ctgtgaacgc gacgccggaa agcgcgcgca
    14041 tcatgatgga agtgatccgt gatatgggcg tagaaaaaac cgttggtttc aaaccggcgg
    14101 gcggcgtgcg tactgcggaa gatgcgcaga aatatctcgc catcgcagat gaactgttcg
    14161 gtgctgactg ggctgatgcg cgtcactacc gctttggtgc ttccagcctg ctggcaagcc
    14221 tgctgaaagc gctgggccac ggcgacggta agagcgccag cagctactaa gtaagatgct
    14281 ttacgcctga tgcgctgcgc ttatcaggcc tacgagacgt atctacccgt aggccggata
    14341 aggcgtagac gcatccggca aaagccgcct catactcttt tcctcgggag gttaccttgt
    14401 ttctcgcaca agaaattatt cgtaaaaaac gtgatggtca tgcgctaagc gatgaagaaa
    14461 ttcgtttctt tatcaacggt attcgcgaca acactatctc cgaagggcag attgccgccc
    14521 tcgcgatgac cattttcttc cacgatatga caatgcctga gcgtgtctcg ctgaccatgg
    14581 cgatgcgaga ttcaggaacc gttctcgact ggaaaagcct gcatctgaat ggcccgattg
    14641 ttgataaaca ctccaccggc ggcgtcggcg atgtgacttc gctgatgttg gggccgatgg
    14701 tcgcagcctg cggcggctat attccgatga tctccggtcg cggcctcggt catactggcg
    14761 gtacgctcga caaactggaa tccatccctg gcttcgacat tttcccggat gacaaccgtt
    14821 tccgcgaaat tattaaagac gtcggcgtag cgattatcgg ccagaccagc tcactggctc
    14881 cggcggataa acgtttctac gcgacccgtg atattaccgc aaccgtggac tccatcccgc
    14941 tgatcactgc ctcgatcctg gcgaagaaac tggcggaagg tctggatgcg ctggtgatgg
    15001 acgtgaaagt gggtagcggc gcgtttatgc cgacctacga actctctgaa gcccttgccg
    15061 aagcgattgt tggcgtggct aacggcgctg gcgtgcgcac caccgcgctg ctcaccgata
    15121 tgaatcaggt actggcctcc agtgcaggta acgcggttga agttcgtgaa gcggtgcagt
    15181 tcttgacggg tgaatatcgt aacccgcgtc tgtttgatgt cacgatggcg ctgtgcgtgg
    15241 agatgcttat ctccggcaaa ctggcgaaag atgacgccga agcgcgcgcg aaattgcaag
    15301 cagtgctgga caacggtaaa gcggcagaag tctttggtcg tatggtagcg gcacaaaaag
    15361 gcccaaccga cttcgttgag aactacgcga agtatctgcc gacagcgatg ctgacgaaag
    15421 cagtctatgc tgataccgaa ggttttgtca gtgaaatgga tacccgcgcg ctggggatgg
    15481 cagtggttgc aatgggcggc ggtcgtcgtc aggcatctga caccattgat tacagcgtcg
    15541 gctttactga tatggcgcgt ttgggcgacc aggtagacgg tcagcgtccg ctggcggtta
    15601 tccacgcgaa agacgaaaac agctggcagg aagcggcgaa agcggtgaaa gcggcaatta
    15661 aacttgccga taaagcaccg gaaagcacac caactgtcta tcgccgtatc agcgaataac
    15721 ggtatactga tctgatcatt taaatttgaa gcactgagta cggagaacat atgaaacgtg
    15781 catttattat ggtgctggac tcattcggca tcggcgctac agaagatgca gaacgctttg
    15841 gtgacgtcgg ggctgacacc ctgggtcata tcgcagaagc ttgtgccaaa ggcgaagctg
    15901 ataacggtcg taaaggcccg ctcaatctgc caaatctgac ccgtctgggg ctggcgaaag
    15961 cacacgaagg ttctaccggt ttcattccgg cgggaatgga cggcaacgct gaagttatcg
    16021 gcgcgtacgc atgggcgcac gaaatgtcat ccggtaaaga taccccgtct ggtcactggg
    16081 aaatcgccgg tgtcccggtt ctgtttgagt ggggatattt ctccgatcac gaaaacagct
    16141 tcccgcaaga gctgctggat aaactggtcg aacgcgctaa tctgccgggt tacctcggta
    16201 actgccactc ttccggtacg gtcattctgg atcaactggg cgaagagcac atgaaaaccg
    16261 gcaagccgat tttctatacc tccgctgact ccgtgttcca gattgcctgc cacgaagaaa
    16321 cctttggctt ggataaactc tacgaactgt gcgaaatcgc ccgtgaagag ctgaccaacg
    16381 gcggctacaa catcggtcgt gttatcgctc gtccgtttat tggcgacaaa gccggtaact
    16441 tccagcgtac cggtaaccgt cacgacctgg ctgttgagcc gccagcaccg accgtgctgc
    16501 agaaactggt tgatgaaaaa cacggtcagg tggtttctgt cggtaaaatt gcagacatct
    16561 acgccaactg cggtatcacc aagaaagtga aagcaactgg cctggacgcg ctgtttgacg
    16621 ccaccatcaa agagatgaaa gaagcgggtg ataacaccat cgtcttcacc aacttcgttg
    16681 acttcgactc ttcctggggc caccgtcgcg acgtcgccgg ttatgctgcg ggtctggagc
    16741 tgttcgaccg ccgtctgccg gagctgatgt ctttgctgcg cgatgacgac atcctgatcc
    16801 tcactgctga ccacggttgt gatccgacct ggaccggtac tgaccacacg cgtgaacaca
    16861 ttccggtact ggtttacggc ccgaaagtaa aaccgggttc actgggtcac cgtgaaacct
    16921 tcgcggatat cggccagact ctggcaaaat attttggtac ttctgatatg gaatatggca
    16981 aagccatgtt ctgataatgg gtgcggcttg atgccctcac cccggccctc tcccacaggg
    17041 agagggtgaa aacatgttga taaggataaa acaatggcta ccccacacat taatgcagaa
    17101 atgggcgatt tcgctgacgt agttttgatg ccaggcgacc cgctgcgtgc aaagtatatt
    17161 gctgaaactt tccttgaaga tgcccgtgaa gtgaacaacg ttcgcggtat gctgggcttc
    17221 accggtactt ataaaggccg caaaatttcc gtaatgggtc acggtatggg tatcccgtcc
    17281 tgctccatct acaccaaaga actgatcacc gatttcggcg tgaagaaaat tatccgcgtg
    17341 ggttcctgtg gcgcagttct gccgcacgta aaactgcgcg acgtcgttat cggtatgggt
    17401 gcctgcaccg attccaaagt taaccgcatc cgttttaaag atcatgactt tgccgctatc
    17461 gctgactttg acatggtgcg taacgcggta gacgcggcta aagcactggg cattgatgct
    17521 cgcgttggta acctgttctc cgctgacctg ttctactctc cggacggcga aatgttcgac
    17581 gtgatggaaa aatacggcat cctcggcgtg gaaatggaag cggctggtat ctacggcgtc
    17641 gctgcagaat ttggcgcgaa agccctgacc atctgtaccg tgtctgacca catccgcact
    17701 cacgagcaga ccactgccgc tgagcgtcag accaccttca acgacatgat caaaatcgca
    17761 ctggaatccg ttctgctggg cgataaagag taattgtgtt tcgctgaaag gcgattgtcg
    17821 tgtgaagccg gagtgggaga ctgctccggc tttttagtat ctattca
//
LOCUS       DAPGWB010000091        17671 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.091, whole genome shotgun sequence.
ACCESSION   DAPGWB010000091 DAPGWB010000000
VERSION     DAPGWB010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17671
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.091"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            86..1225
                     /gene="arnB"
                     /locus_tag="RHX79_002942"
     CDS             86..1225
                     /gene="arnB"
                     /locus_tag="RHX79_002942"
                     /EC_number="2.6.1.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_024188371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4-deoxy-L-arabinose
                     aminotransferase"
                     /protein_id="HDV2198091.1"
                     /translation="MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQ
                     LTGNQHAIAVSSATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDV
                     DRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVG
                     TYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDR
                     QTWGRAPQAEVLTPGYKYNLTDINAAIALTQLAKLEHLNTRRREIAQQYQQALAALPF
                     QPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYR
                     ERFPTLSLPNTEWNSERICSLPLFPDMTTADADRVITALQQLAGQ"
     gene            1229..2197
                     /gene="arnC"
                     /locus_tag="RHX79_002943"
     CDS             1229..2197
                     /gene="arnC"
                     /locus_tag="RHX79_002943"
                     /EC_number="2.4.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate
                     4-deoxy-4-formamido-L-arabinose transferase"
                     /protein_id="HDV2198092.1"
                     /translation="MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEIL
                     LIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDAD
                     LQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYG
                     CMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHSEREFGESKYSFMRLI
                     NLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAV
                     LFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE"
     gene            2197..4179
                     /gene="arnA"
                     /locus_tag="RHX79_002944"
     CDS             2197..4179
                     /gene="arnA"
                     /locus_tag="RHX79_002944"
                     /EC_number="1.1.1.305"
                     /EC_number="2.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-amino-4-deoxy-L-arabinose
                     formyltransferase/UDP-glucuronic acid oxidase ArnA"
                     /protein_id="HDV2198093.1"
                     /translation="MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGS
                     VARLAAERGIPVYAPDDVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFN
                     LHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAIT
                     LHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLH
                     NMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISVAPLLIACGDGALEI
                     VTGQAGDGITMQGSQLAQTLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTER
                     LLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI
                     ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSN
                     LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGS
                     SRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIG
                     NPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR
                     NAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS"
     gene            4176..5066
                     /locus_tag="RHX79_002945"
     CDS             4176..5066
                     /locus_tag="RHX79_002945"
                     /EC_number="3.5.1.n3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-deoxy-4-formamido-L-arabinose-
                     phosphoundecaprenol deformylase"
                     /protein_id="HDV2198094.1"
                     /translation="MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDN
                     MGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHE
                     VGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQQVIE
                     AKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLL
                     NRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVV
                     RGNIAGREGWLGCQQIAGSR"
     gene            5066..6718
                     /gene="arnT"
                     /locus_tag="RHX79_002946"
     CDS             5066..6718
                     /gene="arnT"
                     /locus_tag="RHX79_002946"
                     /EC_number="2.4.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A)
                     4-amino-4-deoxy-L-arabinosyltransferase"
                     /protein_id="HDV2198095.1"
                     /translation="MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLA
                     SGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFT
                     LRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQAWKG
                     KSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLT
                     VLPWGLAIAQREPDFWHYFFWVEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLP
                     GALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFAPLAMLMAHYALLA
                     AKNNPLALRINGWINIAFGVTGIIATFVVSPWGPMNTPVWQTFESYKVFCAWSIFSLW
                     AFFGWYTLTNVEKTWPFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSR
                     YILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHR
                     QEGIITLVLSVDRDEDINSLAIPPADAIDRQERLVLIQYRPK"
     gene            6715..7050
                     /gene="arnE"
                     /locus_tag="RHX79_002947"
     CDS             6715..7050
                     /gene="arnE"
                     /locus_tag="RHX79_002947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnE"
                     /protein_id="HDV2198096.1"
                     /translation="MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLAL
                     ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIG
                     GIVILGSTV"
     gene            7050..7436
                     /gene="arnF"
                     /locus_tag="RHX79_002948"
     CDS             7050..7436
                     /gene="arnF"
                     /locus_tag="RHX79_002948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnF"
                     /protein_id="HDV2198097.1"
                     /translation="MGLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFG
                     LDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFS
                     LKALLGVACIMSGLMLIFLPMTKQRY"
     gene            complement(7430..7696)
                     /gene="pmrD"
                     /locus_tag="RHX79_002949"
     CDS             complement(7430..7696)
                     /gene="pmrD"
                     /locus_tag="RHX79_002949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416762.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein PmrD"
                     /protein_id="HDV2198098.1"
                     /translation="MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGD
                     LLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ"
     gene            complement(7806..9161)
                     /gene="menE"
                     /locus_tag="RHX79_002950"
     CDS             complement(7806..9161)
                     /gene="menE"
                     /locus_tag="RHX79_002950"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HDV2198099.1"
                     /translation="MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELASGF
                     AAQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQF
                     ALVPDGENTFPALTSLHIQRVEGAHAATWQPTRLCSMTLTSGSTGLPKAAVHTYQAHL
                     ASAEGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGC
                     THASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFAS
                     TVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYAT
                     RDRGEMHNGKLTIVGRLDNLFFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGH
                     RPVAVMEYDHESVDLSEWVKDKLASFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQ
                     Q"
     gene            complement(9158..10120)
                     /gene="menC"
                     /locus_tag="RHX79_002951"
     CDS             complement(9158..10120)
                     /gene="menC"
                     /locus_tag="RHX79_002951"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HDV2198100.1"
                     /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGE
                     ISPLPGFSQETWEEAQSVLLAWVNNWLAGDCELPQMPSVAFGVSCALAELADTLPQAA
                     NYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL
                     DANRAWTPLKGQQFAKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLRE
                     PDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSSIESSLGLTQLAR
                     IAAWLTPDTIPGLDTLDLMQAQQVRRWPGSTLPVVEVDALERLL"
     gene            complement(10120..10977)
                     /gene="menB"
                     /locus_tag="RHX79_002952"
     CDS             complement(10120..10977)
                     /gene="menB"
                     /locus_tag="RHX79_002952"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HDV2198101.1"
                     /translation="MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQV
                     RNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG
                     VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG
                     SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWC
                     REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP
                     DFSKFKRNP"
     gene            complement(10992..11750)
                     /gene="menH"
                     /locus_tag="RHX79_002953"
     CDS             complement(10992..11750)
                     /gene="menH"
                     /locus_tag="RHX79_002953"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HDV2198102.1"
                     /translation="MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLY
                     VDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILEFWLVGYSLGGRVAMMAACQGLAG
                     LCGVIVEGGHPGLQNAEQRAERQRSDRQWAQRFCTEPLTAVFADWYQQPVFASLNDDQ
                     RRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAA
                     ELAADCHVIPRAGHNAHRENPAGVIASLAQILRF"
     gene            complement(11747..13417)
                     /gene="menD"
                     /locus_tag="RHX79_002954"
     CDS             complement(11747..13417)
                     /gene="menD"
                     /locus_tag="RHX79_002954"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HDV2198103.1"
                     /translation="MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAEN
                     STFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL
                     LTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLH
                     VGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWR
                     QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSEL
                     QQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWL
                     ELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSL
                     VVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLN
                     ALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKY
                     HRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL"
     gene            complement(13506..14801)
                     /gene="menF"
                     /locus_tag="RHX79_002955"
     CDS             complement(13506..14801)
                     /gene="menF"
                     /locus_tag="RHX79_002955"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HDV2198104.1"
                     /translation="MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWL
                     ASQQTYPQFYWQQRNGDEEAAVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDP
                     SQGNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTT
                     TREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLN
                     LNCYHFYMAFDGETAFLGSSPERLWRRRDNALRTEALAGTVANHPDDKQAQQLGEWLM
                     ADDKNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVI
                     CLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKIS
                     GNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQME"
     gene            complement(14880..15185)
                     /gene="elaB"
                     /locus_tag="RHX79_002956"
     CDS             complement(14880..15185)
                     /gene="elaB"
                     /locus_tag="RHX79_002956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein ElaB"
                     /protein_id="HDV2198105.1"
                     /translation="MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAE
                     KALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR"
     gene            complement(15240..15701)
                     /locus_tag="RHX79_002957"
     CDS             complement(15240..15701)
                     /locus_tag="RHX79_002957"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV2198106.1"
                     /translation="MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDL
                     TGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLET
                     CTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA"
     gene            15766..16683
                     /gene="rbn"
                     /locus_tag="RHX79_002958"
     CDS             15766..16683
                     /gene="rbn"
                     /locus_tag="RHX79_002958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease BN"
                     /protein_id="HDV2198107.1"
                     /translation="MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQ
                     HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVE
                     TALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALN
                     AQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDA
                     ALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGMLIITHVSSRYD
                     DKGCQHLLRECRSIFPATELANDFTVFNV"
     gene            16871..>17671
                     /locus_tag="RHX79_002959"
     CDS             16871..>17671
                     /locus_tag="RHX79_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416772.1"
                     /note="ElaD; specific cysteine protease which targets
                     ubiquitin and ubiquitin-like proteins covalently bound to
                     target proteins; SseL in Salmonella is required for
                     macrophage killing and virulence, and it is secreted by
                     the salmonella pathogenicity island 2 type III secretion
                     system; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deubiquitinase"
                     /protein_id="HDV2198108.1"
                     /translation="MMVTVVSNYCQLSQKQLSQTFAEKFTVTEELLQSLKKTALSGDE
                     ESIELLHNIALGYDKFGKEAEDILYHIVRNPTNETLSIIRLIKNACLKLYNLAHTATN
                     FPLKPTGPDNSDVLLFKKLFSPSKLMTIIGDEIPLISEKQSLSKVLLNDENNELSDGT
                     NFWDKNRQLTTDEIDCYLQKIAANAKNTEVNYPTGLYVPYSTRTHLEDALNENIKSDP
                     SWPKAVQLFPINTGGHWILVSLQKIVNEKNNTQQIKCVIFNSLRALGHD"
BASE COUNT         4182 a         4755 c         4445 g         4289 t
ORIGIN      
        1 aatttcgctc caaatggcaa aatatacaca acactcttta tagcaaatat aagtggacag
       61 gtattcaatg gcggaaggaa aagcaatgtc agaatttttg cctttttcgc gaccagcaat
      121 gggcgtggag gaactcgctg cagttaaaga ggttctcgaa tccggttgga tcacaaccgg
      181 tccgaagaat caggcgcttg agcaagcctt ttgccagttg acgggaaatc agcatgccat
      241 cgcggtcagt tcagccaccg ccggaatgca tatcacgcta atggcgttgg aaattggcaa
      301 gggcgatgaa gtgattacgc cttccctgac ctgggtttca accctcaata tgatttcctt
      361 gttgggtgca acgccggtaa tggtggatgt cgaccgcgat acgctgatgg tcacgcctga
      421 agcgatcgag tcagccataa cgccacgcac taaagccatc attccggtgc attatgccgg
      481 tgcgccagca gatattgacg ccattcgcgc cattggcgaa cgttacggca tcgcagttat
      541 cgaagatgct gcccatgccg tcggtacgta ttacaaaggg cgacatattg gcgcaaaagg
      601 taccgctatt ttttcatttc atgccattaa aaatattacc tgtgcggaag gtggcctgat
      661 tgtaactgat aatgaaaacc ttgcccgcca gctacggatg ctgaaatttc acggtctggg
      721 tgtcgatgcc tatgacagac aaacctgggg ccgtgcaccg caggctgaag tcttaacacc
      781 gggctataag tacaatctga ccgatattaa cgccgcaatt gccctgacac agttagcaaa
      841 attagagcac ctcaacaccc gtcggcgcga aattgcccag caatatcagc aagcactggc
      901 agctctcccc tttcagccat taagccttcc cgcctggccg cacgttcacg cctggcatct
      961 gtttattatt cgtgtcgatg aacaacgttg tggtatcagt cgcgatgcgt tgatggaagc
     1021 gttaaaagaa agaggcattg gtaccgggtt acatttccgc gccgctcaca cacaaaaata
     1081 ttatcgcgag cgttttccca cgctgtcgtt accgaatacc gaatggaata gcgaacgcat
     1141 ctgttctttg ccgctgttcc cggatatgac taccgccgat gccgaccgtg tcatcacagc
     1201 ccttcagcaa ctcgcaggac aataagccat gtttgaaatc caccctgtta agaaagtctc
     1261 ggtggttatt cccgtttata acgagcagga aagcttaccg gaattaatca ggcgcaccac
     1321 cacagcctgt gaatcgttgg ggaaagagta tgagatcctg ctgattgatg acggcagtag
     1381 cgataattcc gcgcatatgc tggtcgaagc ctcacaagcg gagaacagcc atattgtgtc
     1441 tattttgctt aaccgcaatt acgggcaaca ttcagcgatt atggcgggat tcagtcacgt
     1501 taccggcgac ttaattatta cccttgatgc cgatctccag aatccgccag aagaaatccc
     1561 ccgcctggtg gcaaaagccg atgaaggtta cgacgtggta gggactgtac gccagaaccg
     1621 ccaggacagc tggtttcgta aaacagcttc gaagatgatt aaccggctta ttcagcgcac
     1681 caccggcaaa gcgatgggtg actacggttg tatgctgcgc gcctatcgcc gtcatattgt
     1741 cgatgcgatg ttgcactgcc atgaacgtag cacctttatc ccgattctgg cgaatatctt
     1801 cgcccgccgt gccattgaaa ttccagtaca tcattccgag cgtgagtttg gtgaatccaa
     1861 atacagtttt atgcgcctga ttaatttgat gtacgacctg gtgacctgcc ttaccacaac
     1921 gccgctacgt atgctgagtc tgctcggcag cattattgcg attggaggtt ttagcattgc
     1981 agtgctgctg gtgattttac gcctgacctt cggaccacaa tgggcggcag aaggcgtctt
     2041 tatgctattt gccgtgctgt ttacttttat tggcgctcag tttatcggca tgggattact
     2101 cggtgaatat atcggcagga tctacaccga tgtccgcgcc cgcccccgct attttgttca
     2161 gcaagttatc cgtccatcca gcaaggaaaa tgaataatga aaaccgtcgt ttttgcctac
     2221 cacgatatgg gatgcctcgg tattgaagct ctgctggctg ccggttacga aattagcgcc
     2281 atttttaccc ataccgataa tcccggtgaa aaagcctttt atggttcggt ggctcgtctg
     2341 gcagcggaaa gaggcattcc ggtttatgcg ccggatgacg ttaatcatcc gctgtgggtg
     2401 gaacgcattg cccaactgtc gccagatgtg attttctctt tttattatcg ccatcttatt
     2461 tgcgacgaaa ttttgcagct cgctcccgca ggtgcattta atctgcatgg ttcgctgtta
     2521 ccaaaatatc gtggtcgcgc gccgctgaac tgggtgctgg tcaacggtga aacggaaact
     2581 ggcgttacat tgcaccgaat ggtgaaacgt gccgatgccg gggccattgt ggcgcaactg
     2641 cgcattgcca ttgcgccaga cgatatcgct attacgctgc atcataaatt gtgccatgcc
     2701 gcgcgccagc tactggaaca gacattaccc gccattaaac acggtaatat tctggaaatc
     2761 gcccagcgcg aaaacgaagc cacctgtttt ggtcgcagaa cgccggatga cagtttcctt
     2821 gaatggcata aaccggcatc cgtactgcac aacatggtac gtgccgttgc cgatccgtgg
     2881 ccgggtgcct tcagctatgt tggcaatcag aaattcaccg tctggtcgtc gcgtgttcat
     2941 cctcatgcca gcaaagcaca gccggggagc gtgatttctg ttgcgccact gctgattgcc
     3001 tgtggcgatg gcgcgctgga aatcgtcacc ggacaggcgg gcgacggcat tactatgcag
     3061 ggctcgcaat tagcgcagac gctgggcctg gtgcaaggtt cacgcttgaa tagccagcct
     3121 gcctgcaccg cccgacgccg tacccgggta ctcatcctcg gggtgaatgg ctttattggc
     3181 aaccatctga cagaacgcct gctgcgcgaa gatcattatg aagtttacgg tctggatatt
     3241 ggcagtgatg cgataagccg ttttctgaat catccgcatt ttcactttgt tgaaggcgat
     3301 atcagtattc attccgaatg gattgagtat cacgtcaaaa aatgtgatgt cgtcttgccg
     3361 ctggtggcga tagccacgcc gattgaatat acccgcaacc cgctgcgcgt atttgaactc
     3421 gattttgaag agaatctgcg cattatccgc tactgcgtga agtaccgtaa gcgaatcatc
     3481 ttcccgtcaa cttcagaagt ttatgggatg tgtagcgata aatacttcga tgaggaccat
     3541 tctaatttaa tcgtcggccc ggtgaataaa ccacgctgga tttattcggt atcaaaacaa
     3601 ttacttgatc gggtgatctg ggcctatggc gaaaaagagg gtttacagtt caccctcttc
     3661 cgcccgttta actggatggg accgcgactg gataacctta atgcggcacg aatcggcagc
     3721 tcccgcgcta ttacgcaact cattctcaat ctggtagaag gttcaccgat taagctgatt
     3781 gatggcggaa aacaaaaacg ctgctttact gatattcgcg atggtatcga ggcgttatac
     3841 cgcattatcg aaaatgcggg aaatcgctgc gacggtgaaa ttatcaacat tggcaatcct
     3901 gagaacgaag cgagcattga ggaactgggc gagatgctgc tggcgagctt cgaaaaacat
     3961 ccgctgcgcc atcatttccc accgtttgcg ggctttcgcg ttgtcgaaag tagcagctac
     4021 tacggcaaag gatatcagga cgtagagcat cgtaaaccga gcatccgcaa tgcccaccgc
     4081 tgcctggact gggagccgaa aattgatatg caggaaacca tcgacgaaac gctggatttc
     4141 ttcctgcgca ccgttgatct tacggataaa ccatcatgac caaagtaggc ttacgcattg
     4201 atgtcgatac ctttcgtggc acccgtgaag gcgtgccgcg tctgctggaa atcttgagta
     4261 agcataatat tcaggccagc atttttttca gcgtcggccc ggacaatatg ggccgccatc
     4321 tctggcgact ggtgaagcca cagtttttgt ggaagatgct gcgctcaaat gcggcatcgc
     4381 tttatggctg ggatatttta ctggcaggta cggcctggcc aggtaaagag attggtcatg
     4441 ccaatgccga tatcattcgt gaagcggcta aacatcacga agtcggcctg cacgcctggg
     4501 atcaccatgc ctggcaagcc cgtagcggta actgggatcg gcaaacaatg atcgacgata
     4561 ttgcacgcgg ccttcgcact ctggaagaga ttatcggtca accggtaacc tgttctgccg
     4621 ctgcgggctg gcgtgccgac cagcaggtga tcgaagcaaa agaagcgttc catttgcgct
     4681 acaacagcga ttgtcgtggg gccatgccgt tccgtccact gctcgaatca ggaaaccccg
     4741 gcactgcgca aattccggtg accttaccca cctgggatga agtgattggt cgggatgtga
     4801 aagcagaaga ttttaacggt tggttactca accgcatcct gcgagataaa ggcacgccgg
     4861 tttataccat tcatgcagaa gttgaaggct gcgcttatca gcataatttt gtggatctcc
     4921 tcaaacgcgc agctcaggaa ggcgtgacat tttgcccttt aagcgaactg ttatcagaga
     4981 cgttgccgct cggacaagtt gttcgcggaa atattgccgg acgtgaaggc tggctgggtt
     5041 gccaacaaat tgcgggtagt cgctgatgaa atcggtacgt taccttatcg gcctcttcgc
     5101 gtttattgcc tgctattacc tgttaccgat cagcacgcgt ctgctatggc aacccgatga
     5161 aacgcgttat gcggaaatca gtcgagaaat gctggcatcc ggcgactgga ttgtgcccca
     5221 tctgttaggg ctacgttatt tcgaaaaacc cattgccgga tactggatta acagcattgg
     5281 gcaatggcta tttggcgcga ataactttgg tgtgcgggca ggcgttatct ttgcgaccct
     5341 gttaactgcc gcactggtga cctggtttac tctgcgctta tggcgcgata aacgtctggc
     5401 tctactcgcc acagtaattt atctctcatt gtttattgtc tatgccatcg gcacttatgc
     5461 cgtgctcgat ccgtttattg cattctggct ggtggcggga atgtgcagct tctggctggc
     5521 aatgcaggca caggcgtgga aaggcaaaag cgcaggattt ttactgctgg gaatcacctg
     5581 cggcatgggg gtgatgacca aaggttttct cgcccttgcc gtgccggtat taagcgtgct
     5641 gccatgggta gcgacgcaaa aacgctggaa agatctcttt atttacggct ggctggcggt
     5701 tatcagttgc gtactgacgg ttctcccctg gggactggcg atagcgcagc gggagcctga
     5761 cttctggcac tattttttct gggttgagca tattcaacgc tttgcactgg atgatgccca
     5821 acacagagcc ccgttctggt actacgtgcc ggtcatcatt gccggtagcc tgccgtggct
     5881 gggattactc cccggtgcac tgtacacagg ctggaaaaac cgcaagcatt ccgcaaccgt
     5941 ctatttgttg agctggacga taatgccgct gctgtttttc tccgtcgcta aaggcaaatt
     6001 gcccacctat attctttctt gctttgcacc tctggcaatg ctgatggcgc attacgcttt
     6061 gctggcagca aaaaataatc ctctggcgtt gcggattaat ggctggatta acatcgcttt
     6121 tggcgtcact ggcattattg ccacatttgt ggtctccccg tggggaccaa tgaacacgcc
     6181 ggtgtggcaa accttcgaga gctataaagt cttttgtgcc tggtcgattt tttcgctatg
     6241 ggcatttttc ggctggtaca ccttaacaaa cgtcgaaaag acctggcctt ttgccgcgct
     6301 ttgcccgctg gggctggcgt tgctggtagg attttcaatt cctgacagag ttatggaagg
     6361 aaaacatccg caattttttg tcgagatgac acaagaatca cttcagccaa gccgctatat
     6421 tcttactgat agcgtcggtg ttgccgcagg tctggcatgg agcctgcaac gcgatgacat
     6481 catcatgtat cgccagacag gtgagttgaa atacggcctt aattatccgg atgcgaaagg
     6541 gagatttgtc agcggtgatg agttcgcaaa ctggcttaat caacatcgtc aggaggggat
     6601 tattactctc gtgctttcgg ttgaccgcga tgaagatatc aacagtctcg ccattccgcc
     6661 cgcagatgcc atcgatcgtc aggagcgtct ggtgctgatt cagtatcgtc ccaaatgatc
     6721 tggctaacat tagtctttgc cagcttgctt agcgttgccg ggcagttgtg tcagaaacag
     6781 gcaacctgct ttgtggcgat aaacaaacgg cgcaaacata tcgtgctgtg gctgggactg
     6841 gcgctggctt gtcttggtct tgccatggtg ctctggctgc tggtcttgca gaacgtaccg
     6901 gtaggcattg cctacccgat gttaagtctg aattttgtct gggtgacgct ggctgcagta
     6961 aaactgtggc acgaaccggt atcgccgcgt cactggtgtg gggtggcgtt cattattggt
     7021 ggcattgtga tcctcgggag tacggtgtaa tgggcctgat gtggggatta ttcagcgtca
     7081 ttattgcctc agttgcgcaa ttaagcctgg gttttgcggc gagtcatctg ccgccgatga
     7141 cgcacttatg ggattttatc gcggctctgt tagcttttgg cctggatgcc cggatactgt
     7201 tactcgggct gctgggttat ctgctttccg ttttttgttg gtataaaacg ctacataaac
     7261 ttgcgctaag caaagcctat gccttgctca gtatgagtta tgtgctggta tggattgctt
     7321 caatggtact tcccggctgg gaagggactt tttcgctgaa agcactactg ggagtagcct
     7381 gtattatgag cgggttgatg ctgattttcc tgcccatgac aaaacaacgt tactgagttt
     7441 tccctgccac tttacactgc cgttcccact catcggggct ataactgctt gccgagagga
     7501 ctttcaccgt atgcagcttt tcacgattaa tacaataaag cgcattctgc aaaggcgaga
     7561 gtaaatcccc cactttcacg gcgaagtcac tcttcacttc ggcgatcatt tttatcgcgc
     7621 cgccagcatc gcagagcata agtacatgtc tgttatcttg tttattgcag cacgattttt
     7681 tgaccagcca ttccattgca ttatcctgtt tgctaagagt tttcacatca atttacagat
     7741 taacagataa actctttatc aacggcaatg gaatggcaga aatgagaagt gaaacggagg
     7801 gttaattatt gctgacgttg cacccactct tttagcgcct gacgtgaaat tttaataccg
     7861 ccgtttttca gttcaggcgg caacgttaac caacgcaccg gttgctgaaa actggccagc
     7921 ttatctttca cccattcact aagatcaacg ctctcgtggt catactccat caccgccacc
     7981 ggtcgatgac caaactcctt gtcggcaacg gggacgataa acacctgcaa aaccgcagga
     8041 tgtgcagcaa ttacgcgctc gacttcttcc ggctgaatac cctcaccgcc actgaagaac
     8101 agattgtcta aacgtccgac aatggtcagc ttgccattat gcatctcacc gcgatcgcgc
     8161 gtagcgtacc agccttcgtc attaaccagt gaaaccagtt gcccgttacg ccagtaacct
     8221 tctgccatac tggcagcccg cagccacact tcattattaa cgattttcac ttcccgaccc
     8281 ggcagcggcg aaccaacgtc tgccaggccg tcggcttctt tcgcacacac cgtggaggca
     8341 aactcggtca gaccatagcc gcaaaagcaa cgaatcccct gctcgcgcgc ctgttccgtc
     8401 aactcgaccg ggatagccgc gccgccaagt aacaccgctt tcagggaaac ggaactgcgg
     8461 ttaaccagca aacgccagag ttgtgttggc accagtgaag cgtgagtaca gcctgccagc
     8521 atttgctcca atggctgttt atcacgcacc gtcatccgcg caccagcgta taaccagcgc
     8581 cacataattc cctgaccgga gacgtgaaac agcggtaaag agagcaacca gtcatcgtga
     8641 tcgccaaacg gaatcaacga taacacccct tcggcactgg caagatgggc ctgataagta
     8701 tggacagcgg ctttcggcaa cccggtagaa cccgaggtca acgtcattga gcacagacgc
     8761 gtcggctgcc acgtagcggc atgtgcgcct tcaacccgct gaatgtgcag cgacgttaac
     8821 gccggaaacg tgttttcccc atccggcacc agcgcaaatt gcagcgtcag attgggcagc
     8881 aattcttcaa gcaacggttg cggcagctga gggttcacgg gcaacacccg cgccccgcat
     8941 tgcagtaacg ccagccaggc gagcagcgtt tgcggcgtat tccacgcccg caacatcacg
     9001 ccgctgccct caacaacgcc ctgcgccgca aagcctgagg ctaattcatc gacgcgagca
     9061 caaagctcgc gccagttaag ttgctcgtca ttaagacgta aggcgatggc ttctccccgc
     9121 acttgccgcc agtgacgcca cggccagtca gagaagatca taacaaccgc tccagtgcat
     9181 caacttccac gacaggcagc gtgctacccg gccagcgacg tacctgctgc gcctgcatca
     9241 gatccagcgt gtccagccct ggaatggtgt ccggcgttaa ccaggcggca atccgcgcca
     9301 gttgcgttaa gcctaagctc gattcaatgg aagaactgat caccgccgtc agccccagcg
     9361 cgtgcgccgc ctgtacctgc tcgcgtactt tctccagact gcccgtgagc gtgggtttga
     9421 taactaccgc gcgcacgccc tcttcagcca caaaggcaaa atccggctcg cgcaagcttt
     9481 catcccaggc aatggcaatg ccggtttcac gggcaaacgc tcgcgaatca tcgcgggttt
     9541 tgcacggctc ttcgagaaac gcgatgcggt ggcgataatc cgggttaaca tatttggcaa
     9601 actgctggcc tttcagcggt gtccaggcgc gatttgcgtc aagacgcaaa tgcagatccg
     9661 gaattgcctc cagcaacaga ttaaccacca tgccgtcgcg cacggcttcg tacaatccca
     9721 ctttgacctt cgccactttc tcgcctggca tatcagcaag tttgaggatc agatcgtcag
     9781 gatcgccatt acacagtggt gccgcacggt aattggccgc ctgcgggagc gtatctgcca
     9841 gctccgccaa tgcacagctt acgccaaagg caacggaagg catctgcggt agctcgcaat
     9901 cgcctgccag ccagttattt acccaggcaa gcagcacgct ttgcgcctct tcccaggttt
     9961 cctggctgaa gcccggcagt ggggagatct ccccccaccc ttcgcgctcg ccctcacgca
    10021 ggcaaacgta cagcccgtcg cgggttttta accgcctgtc gcgcagaacc acccccgcgt
    10081 ccatggggat ctgccagcgg tatacctgcg cgctacgcat tacggattcc gtttaaattt
    10141 gctgaaatca ggctgacgtt tctggttgaa agcgttgcga ccttcctgac cttcttccgt
    10201 catgtagaac agcatggtgg cgttgcccgc cagctcctgc agccccgcct gcccgtcaca
    10261 gtcggcgttc agcgcagctt tcaggcagcg cagcgccatc gggctgtttt gcagcatttc
    10321 gcggcaccaa cggacggttt ctttttccag atccgccagc ggtaccacgg tgttgacaag
    10381 gcccatatcc agcgcctgtt ttgcgtcgta ctgacggcac aggaaccaga tttctcgcgc
    10441 ttttttctgc ccgacgatac gagccatgta ggaagcgccc cagccgccgt cgaaggaacc
    10501 gactttcggg ccagtctgac cgaagatggc attatctgct gcgatagtca ggtcgcacat
    10561 catgtgcaga acgtgaccac cgccgatgga gtagccagcc accatcgcga caaccggttt
    10621 cggacaggta cggatctgac gctggaagtc cagcacgttc aagtgatgta cgccggaatc
    10681 atctttatag ccgccgtaat caccacgcac tttctggtca ccaccggagc agaacgcttt
    10741 atcgcctgcg ccagtcagaa tgatcacgcc gatattgtcg tcataacgcg catctgccag
    10801 tgcctggatc atctctttta ccgtcagagg acggaaggca ttgcgcacct gcggacgatt
    10861 aatggtgatt tttgcgatac cgtcggtgga tttttcataa cgaatgtcct cgaaaccttc
    10921 ggagcagtcg tgccattcaa ccggtgcgta aagcattgct tcatcaggat aaatcatatt
    10981 gtgtccttta gtcagaaacg caagatctgc gccagacttg cgattacgcc agcgggattt
    11041 tcccgatgcg cgttatgtcc ggcgcgagga atgacatggc agtcggcagc cagttccgcc
    11101 gccagggcgc ggaatttgct gtcacgttca ccacataaat aataaaacgc aaatgtgcgg
    11161 gcactaaggt tagcacgtaa atcaggctgg acggcgagag aagtcgcctc cagcatggcg
    11221 gcaagggttg cgccattatt gttgctgcgc agcgccacca gctcccggcg ttgatcgtca
    11281 ttgagcgagg caaaaacagg ctgttgatac cagtcggcaa ataccgccgt taacggttct
    11341 gtgcaaaaac gctgcgccca ttggcgatcg gaacgctgac gttccgcacg ttgttcagca
    11401 ttttgcagcc ccggatgccc gccttcgaca ataaccccac aaagccccgc cagcccctgg
    11461 caagccgcca tcatcgccac ccgtccgcca agcgagtacc ccaccagcca gaattcaagg
    11521 atgttgtaac taaccaaggt tttacgcagt aagtcggtga catcatcaaa tccatcgacg
    11581 ctaatcgccg ccgaaccacc atgacctggg agatcaacat acaaccgtga gtagtcggca
    11641 aacgcctcgc ccacttcttg ccattcgtgg caatcgccgg aaaaaccgtg caaaaacacc
    11701 agccagggta aacctggttt tccgtgtttt gcctgcgcgt gcaggatcat aaatggctta
    11761 cctgcgccag aagttgctgg agcgtttgcg caccatcggt gtcgttaacc accatttcaa
    11821 tcaccgtggt ggttggcgtg cgccaggcgt cggcaaatgc cgtttcaagt tcctgccagt
    11881 tttgcggacg atgatatttc agctcgaaca tcgcggcggc gtgctcaaaa tggacgtttt
    11941 gcggcatcag atagaaacgc tcacgctcgc tttgcggcgt tggcaacagc gagaaaattt
    12001 gcccgccgtt gttgttcacc acaattaata ccagcggcgc agaaacctga cgcaataacg
    12061 ccagcgcgtt gagatcgtaa agtgcggaga gatcgcccac aatcgccagc gtcggtttgc
    12121 cgcttgcccg ctgaacgcct gcggcggtcg aaagcagtcc gtcgataccg ctggcccctc
    12181 ggttgctgta caccgggtaa cctgccggaa gttgcgaaag cgcatcaatc agacgtacca
    12241 ccaggctgtt accaacaaac aattgcccct gttcaggcag atagtcgcag atgcgatgcg
    12301 ccagttgcgc ttcgccaaac gcatcacggc gggcaataac cgcctgcatt gcctgttccg
    12361 ccaggcgcgg gatttcaacg caccagggct ggcgtttttc tgccggatgc agctccagcc
    12421 agtcggcaat attggcaatt aagcgacgtc cgcgatggtg tgccggatca agtcgccctt
    12481 caatgtcatc aacaatccag tactcttctg gttcacagct tgcctgccat tgcaggagcc
    12541 gtttccccgt caggctgctt cccagttgca ccacaatttg cgcctgctgc agctcgctgg
    12601 tcgctttggc attgcctaac caaagatcgg cacacggcag cggctgcccg gtttgtgaca
    12661 gcacatcgcc aatcagcggc cagccaagag tttgcgccca cagggcaact tttttgccct
    12721 cttccgcact catgcgcccg gcaaccacca cgccgcgctt ttgtcgccag aagaaccagt
    12781 cgcgctgttt ttcactttcc agacgaggcg cttcacgcag ccacggtttg tcgtcctgcc
    12841 accagtcacc cagacgctgt tgccagctaa gcccggtatc gtccatttcg ccatacagcg
    12901 gttcagcaaa cgggcagttg atatggactc cccccacatg aagcgtaccg agagcgtggt
    12961 cgatggtaga aaccagccaa cgtgcgggga tatcctgggt cgggcgcggc aatgaaatac
    13021 tgtgcgtggg gtgagaggcg aacattcccg gctggcgaat tgcctgattc gcgccgcagt
    13081 caattagctc cggcgggcga tcggcggtta acaggatcag tttttctccg gttaacccag
    13141 cttcaatcag tgccggatag agatttgcta ccgccgtgcc ggaggtcaca atcaccgcca
    13201 ccggctgctt gctgactttc gccagcccca gcgccagatg tcccagtcca cgctcatcga
    13261 aatgggtgtg gtgaatgaat gtggaattct ccgccgccgc taacgttaac ggtgtagaac
    13321 gcgagccagg ggcgatacag atgtgtctga cgccgtgacg cgttaatgct tccagaatga
    13381 ccgccgccca gcgtcggtta aatgcgctta ctgacatgag tttgtccggt atcaatattg
    13441 cggctaagta taaggagcta caaaaataga ttattgatat gaatcggtaa tgatgcgact
    13501 cattactatt ccatctgtaa taaagtacgc agccctgccg ctttgttgtc gatttcctgc
    13561 cactcttgct cggggtcgga accacggaca atgcccgcgc cagcatataa tcgcacgaca
    13621 ttgccgctaa tttttgctga gcgcagggaa acgcagaatt cgctttgttg taatgagaga
    13681 tagcccgcag aaccggcgta ccattctcgg gtgaacggtt cgtgacgggc gataaactgt
    13741 cgcgccagat cgcgcggtaa gccagcaact gctgccgttg gctgcaactg atgtaaacag
    13801 atcacatcat ccgctttgtt gagtgaagtc cagatacagc ggcgaagatg ctgcacttta
    13861 cgcagacgca gtacctgcgg cggtaaaaca tccagcgtct gggtatcggc ctgtaatcgt
    13921 tggcagatat cttccaccac cagcatgttc tcgcgctggt ttttatcatc cgccatcagc
    13981 cactcaccta actgctgcgc ctgcttatca tcaggatgat ttgctaccgt tcccgccagc
    14041 gcttcagtac gcagcgcgtt gtcacgccgc cgccataacc gttccggtga agagccaaga
    14101 aaagcagttt cgccatcaaa ggccatgtaa aaatggtagc aattcagatt cagtcgacga
    14161 ctggcagcca tcatcgccgc cgcgttgacc ggacttgcga aatgcaggtc agttgcccga
    14221 gcgagcacca ctttgtcgag ctcaccttcg gcgatggttt tcgttgccag ttcgattaat
    14281 tgcgtccagc ccgttttgtc cggccagtgt tgttctcgcg tggtggttaa atgtaaccca
    14341 ggcaagggct tgatactcac cagtgtggcg ataaattctt ttgcctgaat cgcatcgtgc
    14401 tgaagggagc tttcgctgaa tagcgtcagc cgcagcgtgg ctttaccgcc acagcgtcgc
    14461 cattccaggc ggggtaaaag taaattgccc tgcgacgggt caaaagcatt cagcccccaa
    14521 atgcgtaagt cggcgtgttc cgggtgctgg cgaagaaaac gttgtgcctg gtccaacgac
    14581 gtaaaacggg taatcgcgcc caggacggca gcttcttcat caccattacg ttgttgccag
    14641 tagaattgcg ggtacgtttg ctgactggcc agccagctca aggcatcaaa agcgtctttg
    14701 agagggaaag gaatatcgat aacccgaatg ccgggtgtcg ccggaatctc ttgcgacaaa
    14761 tggcgcagta gattttccag cgccgtagta agtgattgca cgcggacctc tccctgttaa
    14821 aagcctcaca ttatacgggg tactacaaaa aaaatgcagt accccggtgt agggaggttt
    14881 taacggcgtg ccagcaacag tcctagtacc agcccaacgg ccgcgcccac accaattcct
    14941 tgccagggtt tttcgtggac gtagtcatca gcacgataaa ctgcctgctt cgcccgatag
    15001 taataactgt ctgaagcctg gctaacccgt tttttcacat catccagcgc tttttctgca
    15061 cgcgctttca gctcaacata tttctgatcg gcgggatcgc cagaggagcg gagcacctct
    15121 tccagtgttt cactaagcag cgtcaggtcg tcatcgatac gtgtatcacc aaactgatta
    15181 gacattctcg ttctccattt gcgtaaaacc tgtcactaac tatagacaag ggttgttgat
    15241 tacgcctgaa ttacctcgcg tgccatccca atgtgtggga taccatcttc ttcatagacc
    15301 tccgtcacag ggataaaacc gaaactctgg tagaagtttt gcagatgcgc ctgcgccccg
    15361 aggtaaacag gcttatcagg ccagtgatgc gtacatgttt cgagtgtttt actcatcagt
    15421 tgctgcccca ctttttcgcc acgcaacgct tcactgacaa tcacccgacc tataacgacc
    15481 ggctcaagat catcatcact tttcagaatc ctcgcatatg ccaccagttc atcatttttc
    15541 caaccaagaa tatggcgatt atcccccgtc aaatcatcac catcgatatc ctgataaggg
    15601 caattctgct cgacaacaaa caccgcgcaa cgcagttgta ataaggcata aagctgggaa
    15661 accgataatt cagagtgatg cagatcttgc cattcaatca taatgctctc cttttagatg
    15721 tatgccttat actagccgga atattttttg aaacgtgatg aactcatgga attaattttt
    15781 ttaggtactt cggccggtgt gccaacccgc acgcgcaatg tcacggcaat attgcttaac
    15841 ctgcaacatc cgacccagag cggactttgg ttgtttgact gcggtgaagg cacccagcat
    15901 cagctactgc ataccgcctt taaccctgga aaactggaca agatttttat cagtcacctt
    15961 catggcgatc atctttttgg tttacccggc ttgctgtgca gtcgttctat gtcaggcatt
    16021 atccaaccct taacgattta tggtccgcaa ggtatccgtg aatttgtgga aaccgcgctg
    16081 cggattagcg gctcatggac cgattatccg ctggaaattg tcgaaattgg cgctggcgaa
    16141 attctcgatg atggcctgcg caaagtaacc gcttatccgc tggaacaccc actggaatgt
    16201 tatggctatc gtattgaaga acatgataaa ccgggtgcat taaatgccca ggcattaaaa
    16261 gctgctggcg tgccgcctgg tccactgttt caggaattaa aagcgggcaa aacaatcacc
    16321 ctggaagatg gaaggcagat taacggcgca gattacttag ctgctccagt gccaggtaaa
    16381 gcgctcgcta ttttcggcga taccggcccc tgcgatgccg cacttgatct ggctaaaggt
    16441 gtcgatgtca tggtgcacga agcgacgctg gatataacca tggaagccaa agccaatagt
    16501 cgcggccata gctctacacg ccaggctgcg acactggccc gtgaggctgg agtcggtatg
    16561 ctaatcatta cccacgtcag ctcgcgctat gatgacaaag gttgtcagca cctgttacgt
    16621 gaatgcaggt caattttccc ggcgactgaa ctggcgaatg atttcaccgt gtttaacgtt
    16681 taactctgct tattattaaa aacagggcga aacttgccct gttatcgcaa cccgcgctac
    16741 atatatccac ccacacgggc atattgagcg atttttgata tttattcatc tcctcacgca
    16801 ctatattcag agcaataagt tgcctctatt tatcttgatt cagcacaacc tttgcaacta
    16861 aaaggagccc atgatggtta cagttgtcag caattattgt caattatctc aaaagcaact
    16921 cagtcagaca tttgcagaaa aatttactgt gaccgaggaa ttactgcagt ctttaaaaaa
    16981 aacagcgtta tccggagatg aagaaagcat tgagttactg cataatattg cgttaggtta
    17041 tgataaattt ggaaaagaag ctgaagacat tctttaccat attgttagaa acccaacaaa
    17101 tgagacccta tcgattatcc gacttatcaa aaatgcttgt ttaaaattat ataatttggc
    17161 acataccgca accaacttcc cccttaaacc aactggtccg gataattcag atgttctcct
    17221 gttcaaaaag ctattctccc cttcgaaatt aatgacaatt atcggtgatg aaattcctct
    17281 tatatctgaa aaacagtcgc tttcgaaggt gcttttaaat gatgagaata atgaactgag
    17341 tgatggtaca aacttctggg ataaaaatcg tcaattaacc acagatgaaa tagattgcta
    17401 tcttcagaag atcgccgcta atgcaaaaaa tactgaagtc aattatccta ctggtctcta
    17461 cgtcccctac tccaccagaa ctcacctgga agacgctctc aatgaaaata ttaagagcga
    17521 tccatcatgg ccgaaagcag tccagttatt ccccataaat actggcggac actggatatt
    17581 agtttcgcta cagaaaatag taaatgaaaa aaataataca caacaaataa aatgcgtcat
    17641 attcaactca ttgcgcgcac taggccatga t
//
LOCUS       DAPGWB010000092        17577 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.092, whole genome shotgun sequence.
ACCESSION   DAPGWB010000092 DAPGWB010000000
VERSION     DAPGWB010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17577
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.092"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(274..1275)
                     /locus_tag="RHX79_002960"
     CDS             complement(274..1275)
                     /locus_tag="RHX79_002960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000100290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HDV2198109.1"
                     /translation="MSSWLAMLQDAAEMFVFLAVELSLLFIVISAGVSLIRQKVPDHK
                     IQQMMGARKGRGYLLAALLGAVTPFCSCSTIPMLRGLLSAKAGFGPTLTFLFVSPLLN
                     PIIVGLMWMTFGWKVTLLYAIIAAGVSVLASIILDSLGFERHIIASKSSSANCCALAK
                     TSPGTTYTPIKVSCCSPAAKAIENPVVTCCSTKAVVSINPIKLATKDALQQFKDVLPY
                     LLLGVLIGSFIYGFIPSAWIAAHAGADNPFAIPLSAVVGIPLYIRAEAVIPLASVLMT
                     KGMGLGALMALIIGSAGASLTEVILLKSMFRMPMIAAFLTVILGMAILMGYLTQLLF"
     gene            1383..1679
                     /locus_tag="RHX79_002961"
     CDS             1383..1679
                     /locus_tag="RHX79_002961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2198110.1"
                     /translation="MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGI
                     PGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKIA"
     gene            complement(1802..2227)
                     /gene="arsC"
                     /locus_tag="RHX79_002962"
     CDS             complement(1802..2227)
                     /gene="arsC"
                     /locus_tag="RHX79_002962"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-dependent arsenate reductase"
                     /protein_id="HDV2198111.1"
                     /translation="MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIYYLETPPTRDEL
                     VKLIADMGISVRALLRKNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLG
                     TRLCRPSEVVLEILPDAQKGAFSKEDGEKVVDEAGKRLK"
     gene            complement(2240..3529)
                     /gene="arsB"
                     /locus_tag="RHX79_002963"
     CDS             complement(2240..3529)
                     /gene="arsB"
                     /locus_tag="RHX79_002963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite/antimonite:H(+) antiporter ArsB"
                     /protein_id="HDV2198112.1"
                     /translation="MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPG
                     DIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLG
                     AAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
                     NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAI
                     KDPATFKTGWVVLLLLLVGFFVLEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLR
                     GAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSI
                     MNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQ
                     KNMTISWGYYFRTGIIMTLPVLFVTLAVLALRLSFTL"
     gene            complement(3583..3936)
                     /gene="arsR"
                     /locus_tag="RHX79_002964"
     CDS             complement(3583..3936)
                     /gene="arsR"
                     /locus_tag="RHX79_002964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="As(III)-sensing metalloregulatory
                     transcriptional repressor ArsR"
                     /protein_id="HDV2198113.1"
                     /translation="MSFLLPIQLFKILSDETRLGIVLLLSELGELCVCDLCTALDQSQ
                     PKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKVQAIVRN
                     LARQNCSGDSKNICS"
     gene            4676..4759
                     /locus_tag="RHX79_002965"
     CDS             4676..4759
                     /locus_tag="RHX79_002965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Damage inducible protein"
                     /protein_id="HDV2198114.1"
                     /translation="MIDKAIIVLGALIALLELIRFLLQLLN"
     gene            complement(4813..6165)
                     /gene="gorA"
                     /locus_tag="RHX79_002966"
     CDS             complement(4813..6165)
                     /gene="gorA"
                     /locus_tag="RHX79_002966"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HDV2198115.1"
                     /translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVN
                     VGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENV
                     LGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGF
                     FALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVM
                     NAEGPQLHTNAIPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAG
                     VKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHL
                     DYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMK
                     LVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
                     "
     gene            complement(6237..7079)
                     /gene="rlmJ"
                     /locus_tag="RHX79_002967"
     CDS             complement(6237..7079)
                     /gene="rlmJ"
                     /locus_tag="RHX79_002967"
                     /EC_number="2.1.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase"
                     /protein_id="HDV2198116.1"
                     /translation="MLSYRHSFHAGNHADALKHTVQSLIIESLKEKDKPFLYLDTHAG
                     AGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPL
                     IARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
                     ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRK
                     ILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSW
                     IVPE"
     gene            7282..9324
                     /gene="prlC"
                     /locus_tag="RHX79_002968"
     CDS             7282..9324
                     /gene="prlC"
                     /locus_tag="RHX79_002968"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020317218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HDV2198117.1"
                     /translation="MTNPLLTPFELPPFSKILPEHVVPAVTKALNDCRENVERVVAQG
                     APYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQ
                     HEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPIEKQQRYGEIATRLS
                     ELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPS
                     YLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFE
                     NYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDI
                     AYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVR
                     FFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNR
                     PVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENW
                     CWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFR
                     PDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADA
                     FSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGIKG"
     gene            9332..10084
                     /gene="rsmJ"
                     /locus_tag="RHX79_002969"
     CDS             9332..10084
                     /gene="rsmJ"
                     /locus_tag="RHX79_002969"
                     /EC_number="2.1.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709277.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1516)-N(2))-methyltransferase
                     RsmJ"
                     /protein_id="HDV2198118.1"
                     /translation="MKICLIDETGAGDGALSVLAARWGLEHDEDNLMALVLTPEHLEL
                     RKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD
                     AFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD
                     ITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVK
                     RPDYAPPLANVATPNAVVTKGHRFDIYAGTPV"
     gene            complement(10133..11602)
                     /gene="dtpB"
                     /locus_tag="RHX79_002970"
     CDS             complement(10133..11602)
                     /gene="dtpB"
                     /locus_tag="RHX79_002970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpB"
                     /protein_id="HDV2198119.1"
                     /translation="MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQ
                     LGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSL
                     LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIAL
                     SLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFKPMSFSKLLYVL
                     LGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLML
                     EAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVLASPILAGIYT
                     HLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG
                     ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLET
                     LPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIATPESH"
     gene            complement(11920..12354)
                     /gene="uspA"
                     /locus_tag="RHX79_002971"
     CDS             complement(11920..12354)
                     /gene="uspA"
                     /locus_tag="RHX79_002971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HDV2198120.1"
                     /translation="MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYS
                     DLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKY
                     DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE"
     gene            12745..13080
                     /gene="uspB"
                     /locus_tag="RHX79_002972"
     CDS             12745..13080
                     /gene="uspB"
                     /locus_tag="RHX79_002972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspB"
                     /protein_id="HDV2198121.1"
                     /translation="MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYV
                     DGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVV
                     SLIALMIWH"
     gene            complement(13151..14650)
                     /gene="pitA"
                     /locus_tag="RHX79_002973"
     CDS             complement(13151..14650)
                     /gene="pitA"
                     /locus_tag="RHX79_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter PitA"
                     /protein_id="HDV2198122.1"
                     /translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
                     TRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLL
                     AAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLI
                     VSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSA
                     IGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQ
                     HPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSL
                     DQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVAL
                     ALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVL
                     SSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL"
     gene            14882..16084
                     /locus_tag="RHX79_002974"
     CDS             14882..16084
                     /locus_tag="RHX79_002974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDV2198123.1"
                     /translation="MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILM
                     SGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLF
                     CDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATG
                     GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITA
                     ENGIVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPN
                     QSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGY
                     RTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQ
                     DLIAAKSS"
     gene            complement(16400..17452)
                     /locus_tag="RHX79_002975"
     CDS             complement(16400..17452)
                     /locus_tag="RHX79_002975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2776 domain-containing protein"
                     /protein_id="HDV2198124.1"
                     /translation="MNIYIGWLFKLIPLIMGLICIALGGFVLESSGQSEYFVAGHVLI
                     SLAAICLALFTTAFIIISQLTRGVNTFYNTLFPIIGYAGSIITMIWGWALLAGNDVMA
                     DEFVAGHVIFGVGMIAACVSTVAASSGHFLLIPKNAAGSKSDGTPVQAYSSLIGNCLI
                     AVPVLLTLLGFIWSITLLRSADITPHYVAGHVLLGLTAICACLIGLVATIVHQTRNTF
                     STKEHWLWCYWVIFLGSITVLQGIYVLLSSDASARLAPGIILICLGMICYSIFSKVWL
                     LALVWRRTCSLANRIPMIPVFTCLFCLFLASFLAEMAQTDMGYFIPSRVLVGLGAVCF
                     TLFSIVSILEAGSAKK"
BASE COUNT         4576 a         4419 c         4520 g         4062 t
ORIGIN      
        1 gtgtatttaa aaatgtgttg tattagcgac tgaaatctgc cttttaaaaa ggaggagggt
       61 actgagacaa agagtcattg cttctccgat aaaatgtcag agaagcatga ttacgtggtt
      121 attgtctgtt gatgacttgt tgaccgagcc gtcatcattc tcaatgcatt agttaaatca
      181 tttgtgattt ttaaggatta tcctgtctat gattttctac ttagaaggat atggcactaa
      241 ctatgcatct tatagtttac tgctggcatc tatttaaaat agcaattgag tcaaatagcc
      301 catcaagata gccataccta atataaccgt caggaatgca gctatcatcg gcattctgaa
      361 cattgattta agtaatatca cttccgtcag gcttgcgccg gcactgccga tgattaatgc
      421 cattaatgct cccagaccca ttccttttgt catcagaaca gatgccagag ggataactgc
      481 ctcagcccgg atatacagcg gaataccgac aacggcgctt aatgggatgg cgaagggatt
      541 atctgctcct gcatgagcgg caatccacgc tgagggaata aagccataaa taaaagatcc
      601 tattaatact cctaacaaaa gatatggcag tacatcttta aactgttgca acgcatcttt
      661 ggtggctagt tttatgggat taatacttac tacagctttg gtactgcaac aggtaactac
      721 ggggttctca atggctttag ccgctggact acaacaactc acttttatgg gcgtatatgt
      781 cgttcccggc gaagtttttg ctagagcaca acaatttgct gatgagcttt tactggcaat
      841 gatatgacgt tcaaacccca gagaatccag gataatactg gcaagaacag agacgccggc
      901 ggcgataatc gcgtacaaca aggtgacttt ccaaccaaag gtcatccaca ttagtccgac
      961 gataatggga ttaagtaatg gtgaaacaaa taaaaaagtg agagtcggac caaacccggc
     1021 tttcgctgac aacaatccac gtaacatggg tattgtcgag caactacaga acggggtaac
     1081 ggctcccaac agagcagcca ggagatagcc tctccctttt ctggccccca tcatctgctg
     1141 gattttatgg tctggcacct tttgtcttat caggctgaca ccggcactaa tcactataaa
     1201 cagcaacgaa agctcgacgg cgagaaacac aaacatctct gcggcatctt gcagcatcgc
     1261 aagccaacta ctcatacgta acctcattgg ataaatctat atttccagaa taatcgaaat
     1321 gaaattcaga tcaagatatt tctggtatta tcgaaatatc aaccagacaa agggggtgtc
     1381 atatgcagtt ggaagaagtt gctaaagcgc tgaaagagct aggtcacccg acccgtttgt
     1441 tcatattcaa acacctggtc aaagcggggg agcaaggttt gccggtcggt gagttgcaaa
     1501 agcagcttgg gatacccggc tctacactca gtcaccatat ttcagcactg gtatcggtag
     1561 ggctggttaa acaaaaccgt gagagtcgga cgctgatgtg tgtttcgcaa tacgcaatgc
     1621 tggaagcgat aattgaattc ttacgcgagg agtgctgcgt aaatagcaaa attgcctgat
     1681 gcgctacgcg ctacagattt catgccatgc acggttttgt aggtcggata agacgcgtta
     1741 gcgtcgcatc cgacataaac aaagcgcact ttaccaacta tgggcagtgg atatcgccgc
     1801 tttatttcaa ccgcttaccc gcttcatcaa ccactttctc gccatcttcc ttggagaatg
     1861 cgcctttttg cgcatctggc agaatttcca gcaccacttc tgaagggcgg cacaggcgag
     1921 ttcccagcgg cgtcaccaca atcgggcgat taatcagaat cgggtgctga agcataaagt
     1981 cgattaaccg atcgtcagta aatttatctt ctgcaaggcc cagttcctca tacggctcga
     2041 cgtttttacg caacagcgcg cgtacggaaa tccccatatc ggcaatgagt ttgaccagct
     2101 catcgcgcgt tggcggtgtt tccagataat agataatggt cggttctgta ccgctgttgc
     2161 ggatcatctc cagcgtatta cgcgacgtac cgcaggccgg gttgtgataa atggtaatgt
     2221 tgctcatatc aatatctcat tacaaagtga aagagagacg tagcgccagc acagccagcg
     2281 tcacaaaaag caccggcagg gtcatgataa tccctgtacg gaagtaatat ccccagctga
     2341 tagtcatatt cttctgcgaa agtacgtgca gccagagtag cgtagccagg cttccaattg
     2401 gggtaatttt cggtcccaaa tcgcagccaa tcacattggc ataaaccatc gcttctttga
     2461 taacgccaga tgccgtgctg ccatcaatgg acaacgcgcc aaccagtacc gtcggcatat
     2521 tgttcataat agaagagagg aaggcggtga ggaatccggt gccgagcgtc gcggcccaca
     2581 ggccgttatc cgccagcacg ttgagtacgc cagaaagata ttccgttaat ccggcattgc
     2641 gcaggccata aaccaccaga tacatgccga gcgagaagat gacaatctgc cagggggcac
     2701 cgcgcaggac tttacccgta ttaatcgcat gaccgcgttt agcgacgaca aataatatca
     2761 gcgcgcccac agctgcaatg gcgctcaccg gaatgccgag cggttccagg acgaaaaatc
     2821 ccaccagcag aagcagtaaa acaacccagc cagttttgaa cgtagcagga tctttgatcg
     2881 cttctgcggg agatttcagc agcgccatat cgtagttctg cggaatatct ttgcgaaaat
     2941 agagatgtaa catcaccagc gtggcaacaa tcgcggcgat atccaccggc accatcaccg
     3001 aggcgtattc gcgaaagccg aggccaaaga aatcagcgga aacgatattc accaggttgg
     3061 agacaataag cggcaggctg gcggtatcgg caatgaatcc ggccgccatc acgaacgcca
     3121 gcgtagtgcc tttactgaac cctaaagcca gcagcatggc gatgacaatc ggtgtcaaaa
     3181 taagcgccgc gccatcattg gcaaacaggg cggcaacggc agcaccgagc aggacaatcc
     3241 aggtaaacag caagcgacca cgaccattac cccagcgtga gacgtgcagc gccgcccatt
     3301 caaaaaagcc ggactcatcc agcagcaggc tgatgataat gacggcgata aacgcagccg
     3361 tcgcgttcca gacgatattc cacaccaccg gaatatcacc cggatggacc acgcccgtaa
     3421 ctaacgccag tactgcgccg agcgttgcac tccagccgat gcctaaacct ttcggctgcc
     3481 agataaccaa tacgatggtc aggacaaaga tagcgcctgc cagtaacata atgcctcccg
     3541 gataaaacac atctgaaaat tcatatgtgt ttagctaaat ttttaactgc aaatgttctt
     3601 actgtccccg gaacagtttt gtcgagccag gttgcggaca atcgcctgaa ccttttcctg
     3661 ttcacatcgc caggcctcat caataatttt cgccgcccat gctggaatat gcggtgataa
     3721 gcggtaatga acccacttac cttgcttgcg gtccagcaat agcccgcttt cacgcagcaa
     3781 tgccaggtgg cgggagatct tgggctgcga ctggtcgaga gcagtgcaga gatcgcagac
     3841 gcataactct cccagttcgc tgagcagtaa aacgatgccc agacgggttt catcagaaag
     3901 aattttgaac aattggatgg gtaacagaaa tgacatattg cgctcctgat tgttgcaggt
     3961 agtgtctctc ttcgaagcgg ataagtcaaa aacatatatg acttaacgaa tgtgtaagtg
     4021 cagaggaagg taataggtgt gaattttgag ttggctattc atttgaaagg aggtctgaat
     4081 caggacgtaa aaaaaccgac tttacgtcgg ttttttactt tccagccctg agttggtggc
     4141 tctggctgga gtgagagagt tcttatctaa cagctcaata ctattagcca gtggctaaca
     4201 ttgcaagaat tagcgatttc ttcagctggc ggagggggca cttcggtata tatcgcaatg
     4261 acgatttata tactttcact gggtcatcgt catattaagc cttgtccgaa tccggatgta
     4321 aaaaaaccga ctttgcgtcg gttttttact ttccagccct gagttggtgg cactggctgg
     4381 agtgagaatg ccattatcta acgcatcaat gctaatacca tactgaaact attgcaagga
     4441 catgctggtt ttataacctg aatgtactgt atgattatcc agttagctct gaggcatttt
     4501 cactctggta atgcgcataa acgctttcaa agtcctggtc agaagtacgg gtggtgccgt
     4561 taactgatgc tctggccgga gtgagaatgc cattatctaa caatagggca tgtgccgtga
     4621 caggcagtgg atgagtaagc ggatgcattc tcactccatc gcatggagaa aacgggtgat
     4681 tgataaagca atcatcgttc ttggggcgtt aattgcgctg ctggaactga tccgctttct
     4741 gcttcagctt ctgaactgat agcggaaacg taattaaggg ctaagagcac actactctta
     4801 gccctttaac atttaacgca ttgtcacgaa ctcttctgcc gccgttgggt gaatggcgac
     4861 ggtattgtcg aagtcttttt tggttgcacc catcttcagc gccaccgcga agccctgcaa
     4921 catttcgtcc ataccaaagc caatgccgtg aataccgaca atcttctctt ccgatccaac
     4981 gcacaccagc ttcatgcggc acggctggcg gtgagtggtg acggcggtat acatcgcggt
     5041 gaaagaggat ttatacactt tcacctgatc gtcgccatac tgctcgcgcg cctgcggttc
     5101 cgttaaacca acagtaccaa tcggcggatg gctgaagacc acggtcggaa tgttgctgta
     5161 atccagatgc tcatccggct tgttattaaa caggcgttca gagagacggc gacccgctgc
     5221 aactgccacc ggtgtcagct ccactgcacc cgtgttatcg cccaccgcgt aaataccttc
     5281 aatattggtg ttttgatatt tatcgacgac gatatagcct ttttcgttag ttttaacgcc
     5341 agcggcttcc aggttgatgt tgtcattggc aggctcgcga ccaatcgccc aaatcaggca
     5401 atccaccgtt tcactgcgac catcttccag ctccagcgtc aggctaccat cggcattttt
     5461 cactaccgct ttcgggatgg cgttggtgtg cagctgcggg ccttcggcgt tcatcacttc
     5521 gaccagcgtt tcggaaatca tcgggtcgaa gctgcgcagc ggcgcatgtt tacgcacaaa
     5581 cagatgcgtt ttcgcgccga ggccgttaat cacgcccgcc agctcaacgg cgatgtaacc
     5641 cgcgccaaca accgccacgc gctctggcaa agcaggaagg gcgaagaagc catcagaatc
     5701 aataccgtat tccacgcccg gaatatccgg gtggctcgga cgaccgcctg tggcgatcag
     5761 aatatgatcg gccgtgatgg tttcgccgtt tacctccagc gttttggcat caacgaagcg
     5821 ggcaaagcct ttgattacat caacgttatt tttaccgagc acgttttcat aggaagtatg
     5881 aatacggtcg atataggcgg tacggctggc gatcaacgtt tcccagttga atttattgat
     5941 agtggtatca aaaccataat ccgggccgta catatggatc gcttcacgga tttgcgccgc
     6001 gtgccacatc acttttttcg gcacacagcc aacatttacg caggtgccgc ccagctcttt
     6061 ggcttcaatc agcgcacatt tctggccgta catagccgcg cggttgatgg aggcgatacc
     6121 gccgctgccg ccgccgatgg cgatgtaatc atagtgttta gtcatgacaa agtgtcctta
     6181 tcgttgatta ccgcgattgt agcgcgagac gtaataggtg ccagcaatgg ctgcaattac
     6241 tccggcacga tccagcttac ggtggcgtgc ccggtgcctg ccggaaccag tttgctgtgc
     6301 agccacggca gcacgttatt catctgctgt tccagtttcc acggcgggtt aatcacaatc
     6361 atgccggaag cggtcatgcc acggcgatcg ctgtctggca gtaccgccag ttcaatttgc
     6421 agaattttgc gaataccggt cgcttccaga tcgtggatca tgcgcttaat ttgctgacgc
     6481 agcaccaccg gataccacag tgcgtaagta ccagtggcga aacgtttgta accttctgct
     6541 atcccgctga ccaccgcctg atagtcggtt ttcatttcat acggcgggtc gataaggatt
     6601 aaaccacggc gggaaaccgg cggcagtttg gccttaagct gctggaaacc atcggctttt
     6661 tcgacgcgcg cacggctgtc tttctgaaat tcagaacgca gcaacgggta atcgctcggg
     6721 tgcagttcgg tcagttgcag gctgtcttgt tcgcgcagta gctggcgagc aatcaatggc
     6781 gaaccggggt agtaacgcaa ctgaccgcta cggttgaagt gttttaccac attgatgtac
     6841 gcctccagtt ctgcgggcaa atcgtcctgc tgccagatac gggcgatgcc ttcgagatat
     6901 tcgccggtac gctcggcatg ttcgctgcct aactgataac gcccggcccc tgcgtgggtg
     6961 tcgagataga gaaacggttt atctttctct ttcagcgact cgatgatcag gctctgaacg
     7021 gtatgtttaa gggcgtcggc gtggttgcca gcgtgaaagc tgtggcgata actgagcatg
     7081 ggtaaaggtg ttccggtaag taaaaatcgg cccgtattcg gggcgcacaa aagcgtatca
     7141 ggacagtata ccgaaaagag gccgccgccg cgaaagcgta acgtttctca ttgaaattca
     7201 ctacacttaa ccccatgcta cacacattat gtaaagcgcc tgttgagcgc ttccttaacc
     7261 tctttaacca ggactgcgcg aatgacgaat ccgttactga ctccctttga attgcctccg
     7321 ttttctaaaa ttctcccgga acatgtcgtt ccagccgtga ctaaggcgct gaacgactgc
     7381 cgcgaaaatg tggagcgcgt agtagcgcaa ggagcaccgt acacctggga aaatctctgc
     7441 cagccgttgg cggaagtgga cgatgtgctg gggcgtatct tctccccggt cagccacctg
     7501 aactcggtga aaaatagccc ggaactgcgt gaagcgtacg aacaaaccct gccgctgctg
     7561 tcggaataca gcacctgggt agggcaacat gaagggctgt ataaagcgta tcgcgacctg
     7621 cgcgatggcg atcattacgc cacgctgaac acggctcaga aaaaagcggt tgataacgca
     7681 ctgcgcgact tcgaactctc tggcatcggt ctgccaatag agaaacaaca acgctacggt
     7741 gagattgcca ctcgtctttc cgagctgggc aaccagtaca gcaacaacgt cctcgatgcg
     7801 acgatgggct ggaccaaact cgttaccgac gaagcggagc tggcggggat gcctgaaagc
     7861 gcgctggctg cggcaaaagc ccaggccgaa gcgaaagagc tggaaggcta cctgctgacg
     7921 ctggatatcc caagctacct gccggtaatg acctactgcg acaaccaggc cttgcgtgaa
     7981 gagatgtatc gcgcttacag cacccgcgcc tccgatcaag gcccgaacgc cggtaaatgg
     8041 gataacagca aggtgatgga agagatcctc gctctgcgtc acgaactggc gcaactgctg
     8101 ggctttgaaa actacgcctt taaatccctt gccactaaaa tggcagaaaa cccgcagcag
     8161 gtgctggatt tcttaaccga tctggcaaaa cgcgcgcgtc cgcaaggcga aaaagagctg
     8221 gcacaactgc gcgccttcgc caaagcggaa tttggcgtcg atgagttgca gccgtgggat
     8281 atcgcgtact acagcgaaaa acaaaaacag cacctctaca gcatcagcga cgagcagctg
     8341 cgtccgtact tcccagaaaa caaagcggtt aacggcctgt ttgaagtggt gaaacgtatt
     8401 tacggcatca ccgctaaaga gcgtaaagat gttgatgtct ggcatccgga tgtacgtttc
     8461 ttcgaactgt atgacgaaaa taacgaactg cgcggcagct tctacctcga tctgtatgcc
     8521 cgtgaaaaca agcgcggcgg ggcgtggatg gatgactgcg taggccagat gcgtaaagct
     8581 gatggttcgc tgcaaaaacc ggtcgcgtat ttgacttgta acttcaaccg cccggtaaat
     8641 ggtaaaccgg cgctgttcac tcacgacgaa gtgatcaccc tgttccacga gttcggtcac
     8701 ggcctgcacc atatgctgac ccgcatcgaa accgctggtg tttccggtat cagcggtgtg
     8761 ccgtgggatg cggtcgaact gccgagtcag tttatggaaa actggtgctg ggagccggag
     8821 gcgctggcgt ttatctccgg tcactatgaa accggcgaac cgctgccgaa agagttgctg
     8881 gataaaatgc tggcggcgaa gaactaccag gcggcgctgt ttattctgcg tcagctggag
     8941 ttcggcctgt ttgatttccg ccttcatgcc gagttccgcc cggatcaggg ggcaaaaatc
     9001 ctcgaaactc tggcagaaat caagaaactg gttgccgtgg tgccatctcc gtcctggggc
     9061 cgtttcccgc acgctttcag ccatattttc gccggtggtt atgcggcagg ttactacagc
     9121 tacctgtggg ctgacgtact ggcggcagat gctttctcgc gctttgagga agagggcatt
     9181 ttcaaccgtg aaaccgggca gtcgttcctc gacaacattc tgagccgtgg cggttcagaa
     9241 gagccgatgg atctgttcaa acgcttccgt ggtcgtgaac cgcagctgga tgcgatgctg
     9301 gagcattacg gcattaaggg ctgatcattc agtgaaaatc tgcttaattg atgaaacagg
     9361 cgccggagac ggcgccttat ctgttctggc ggcccgctgg gggctggagc acgatgaaga
     9421 caacctgatg gcgctggtgt taacgccgga acatctggaa ttgcgcaagc gtgatgagcc
     9481 aaaacttggc ggcatctttg ttgattttgt tggcggagcg atggcgcacc gacgcaaatt
     9541 cggcggtggt cgcggtgagg cggtggcgaa agcggtgggc attaaaggcg attatttgcc
     9601 ggatgtggtg gatgccaccg cagggctggg gcgcgatgcc tttgtgctgg cttcagtcgg
     9661 ctgccgcgtg cggatgctgg agcgtaatcc agtcgttgcc gcattgctcg acgacggcct
     9721 ggcgcgtggt tatgcggatg cggaaatcgg cggctggttg caggagcggt tgcagttaat
     9781 tcacgcctcc agcctgacgg cgctgactga tattaccccg cgcccgcagg tggtttatct
     9841 cgacccgatg ttcccgcata agcagaaaag cgcgctagtg aaaaaagaga tgcgtgtctt
     9901 tcagtcgctg gtgggaccgg atcttgatgc cgatggatta ctggagcctg cacgcttgct
     9961 ggcgaccaaa cgcgtggtgg taaagcgccc ggactacgcg ccaccgctgg cgaatgtcgc
    10021 cacgccaaac gcggtagtca ctaaagggca taggtttgat atttatgcag gtacgccagt
    10081 gtaaaagtaa accagggtag cgataacgct accctgcttt ctgcaagaat aattaatggc
    10141 tttccggcgt cgcaatcatg cgtttcagcc acggcaccat caacagcatc actactgcaa
    10201 cgcccagtgt gaccagacca atcttaccaa acacgttggt atagacgggc aacgtctcaa
    10261 gcggatcggt aatgttgtcc ggcaccgcgg taaatgttgc cacatagccg cccagcaaga
    10321 acgcggcagc ctgcgtcagg aaccacatcc cgagaataaa gcccatcaaa tgctgcggca
    10381 ccagggcagc aatcatcgcc aggccaaggg cgctaataaa cagttcacct aagctctgga
    10441 ataagtacac cagcacgata aaccatggcg atgtcagccc ctgggcatcc gcaaaccaca
    10501 ttcccgcagc tgcagccgtc aaaaagccca gagagcacat aaacatgccg agagtaaatt
    10561 tcatcggcat cgagaggtct ttgcctttgt tacccagatg cgtgtaaatg cctgccagta
    10621 ttgggctggc gagtaccacc cagaacgggt taagcgcctg gaagctgacc gggttgatgg
    10681 aaaaaccgag aatttcatga tgcacgttgt tgatggcaaa gaagttcagc gatgttggca
    10741 tctgggcgta gagaatgtaa aacaccaccg cttcgagcat caggacaaag gcgacaaaca
    10801 ttttattgcg cccggtttta tccagcttga atgcctgacg aaagaagatg atggtgacga
    10861 cgatggagag aacaatcagc accagattgg cgacttctac gttgtgcatc agccatgcac
    10921 atacgaagat catcaccacg ctgccaagta atacgtacaa cagtttgctg aagctcatcg
    10981 gcttgaagtc gggttcagaa ccaatgtctt tcaccattcc acgacaggcg atgtaaacca
    11041 gtaatgcgat aattaacccc gccccgcaca ggttgtaggt gactgaataa ccgaatctat
    11101 cagcgatcac aggggccagc gataacgcta tcaacgagcc gatattgatc gacatataga
    11161 acagggtgaa tgcgccatca agccgcggat ctttcggcgg atagcacttc gaaagcaagc
    11221 tggctgggtt agctttaaac aggccgttac cgacagcgat agtccccagg gcgatgaaaa
    11281 tcaggtcagg cttaagtagc gacatgccgg tcatgaagta gccaatcgcc agcacaagtg
    11341 ctccgagaac aatggtgcgt ttggtcccca gcaggtggtc gccgacatag ccgccaatgg
    11401 aaatgaggcc atagaccagc gcagcaaaag caccaaaagt gacaaaagcc tgctcttgcg
    11461 agaatccaag ctgtttaacg aagaaaaccg ccagtacgcc ctgcacgccg tagtagccga
    11521 atcgctccca taactcgaca aaaaagatca tgaaaaatgg gcgaggttgc tgcagcatcc
    11581 ccatgggtgt tgttgtattc atatttatta accttccaat accatcctga aaagtatgaa
    11641 cgcgtaaggg ataacgcgcg aaaaagttta catctgtcag agattcttaa tattgatgcg
    11701 gtgaatagat taatgcacta ttacaacaga aaataaccag ctgatcacac taatgatgga
    11761 aaatatgatg gtgttaaatg ttgtattggc aggagatttt gattgcgtac gcagatcgta
    11821 ggccagataa ggggtttacg ctgcatcagg taacaaggcg cgccaaaaag caaaacgccc
    11881 gcatatgcgg gcgttcagga acacgtcgtg gagggatgat tattcttctt cgtcgcgcag
    11941 cggaacaatc agcatatcaa cgtgaacggt gttgatcagc tgacgtgcgg aagacatcag
    12001 tttgctccag aagtcctggt ggtgaccaca aaccaccaga tccatatcgt atttcttgat
    12061 tgcatcgacc agaacctggc ccaggtcgcc gctgccgctc agggtttcag tgattgggta
    12121 gcctgcatta gtggaaagct cggtcagcgc atgatgtgtc tcttcagaga tgcgtttctg
    12181 catatcaccc agattcacat caataagccc ggtgtatagg tcagagtagt ttacatctac
    12241 gtggatcaga gaaactttcg cattgtaggg gcgagccata gagactgctt tctctaccag
    12301 aactttgctt tccggggaga gatcgactgc gatgagaatg tgtttataag ccatagtgtt
    12361 actccttcca taaagttgtc gatgactggc cagctagcgt ttcttgtgcc gttacgtcac
    12421 ccgcgtcctg cgaactacgt gcgcggggct aacccagccg taaagattca gtgttaagac
    12481 catccttacc ttatagcgac ccggatgatc cgtcaatccg ccttgcttac ccgttagata
    12541 aacaaatttt cgacatgaat atattgatag tggttaacct tctggaaaaa aaacaacctg
    12601 atctcctaca ctatctatag agccgctcgg atgttggtca ccacaaaagc ggtttctcca
    12661 ggacctggtg ttaactgatt ggcagcgtat cgggagcggt agccccgggg tggaactccg
    12721 cgggcaggtc gccggggagg aggtatgata agcaccgtcg cattattttg ggctttatgt
    12781 gtcgtttgca ttgttaacat ggcgcgctat ttctcatcac tacgcgcgtt gttagtggta
    12841 ctgcgtaact gcgatccatt gctctatcaa tatgttgatg gagggggctt ttttacctca
    12901 catggccaac ccaacaaaca ggtgcgtctc gtttggtata tctatgccca acgttatcgc
    12961 gatcatcacg atgatgaatt tattcgccgc tgtgagcggg tgcgtcggca gtttattctg
    13021 accagcgcat tgtgtggtct ggtggtggtc agcctgattg cattgatgat ttggcattaa
    13081 gcacttcagc aataataacg cataaaaaaa gcgggccagt aaactgaccc gctcgttttg
    13141 gtgtgtacga ttacaggaac tgcaaggaga gccagtacag tccgccggaa agcagtaccg
    13201 cagccggaag ggtaaacacc caggccatca gaatactggt tacggtttta cgctgtaagc
    13261 cgccgccatc taccaccatc gtccccgcga cagaagagga gagtacgtga gtagtggaaa
    13321 ccggcatccc ggtataactc gccaggccga tagacactgc cgccgtcatc tgggccgaca
    13381 tcccctgagc gtaggtcatg cctttcttac cgattttctc accgatagtc gttgccacac
    13441 ggcgccagcc aatcatcgta ccgataccta acgccagcgc gaccgccatg atgatccaca
    13501 ccggtgcata ctcgatggtg ctaagcatgt cggacttcag tttcttcaac aggcgctgat
    13561 cgtcagcact cacaccaggc atcttcacca ctttgtcgat agtgtcagaa acgcacagca
    13621 taatgcggcg catctggcta cgttgatcaa gcgacagctt gtcgtagctt tccacatcgg
    13681 tagtcaacat gcctttcagg cggttgagcg cgttaatggt attcgacgga tggcaatgga
    13741 actccgcggg ttgcgttgcg ccagcttccg gagccggtac taactgatca gcaccggtag
    13801 cctgtttgag cagcgcagga tgctgctcaa agtaagcttc gacgttgttg atggcatcac
    13861 gggtacgggt gatttcgtag ccagtggcat tcatgttcac cacgaagcct gctggtgcga
    13921 cgccaatcaa taccaacata accagaccaa tgcctttctg accatcgttc gcgccgtgcg
    13981 aaaacgccac gccgatagcg gaaaggatca gcgcaatacg cgtccagaac ggcggctttt
    14041 tcttgccgtc tttcttttca cgctccgctg gggtcaggtg gatacgggcg cgtttcttgg
    14101 tgccgctcca gtagcgacgc agcaagaaaa tcagaccgcc agcaaacacc aggccgacaa
    14161 taggggaaac gatcagagaa ccgaaaatac ttaatacttt cgggatattg agtgcatcca
    14221 ccactgacgt cccggtcatc aacgcattgg ttaaaccaat cccgatgatc gcgccaatca
    14281 gcgtatgaga gctggatgca ggtaaaccaa agtaccaggt acccaggttc cagataatcg
    14341 ccgccagcaa catagagaac accatggcaa ggccatgaga cgatcccata ttaagcagca
    14401 gatccgtcgg cagcatatgc acaatggcat aggcaacact cagaccaccc agcaaaacac
    14461 ccaaaaagtt gaacaccgct gccataacca cggcgagctg agaacgcatc gcgcgggtat
    14521 agataacggt tgccacggcg ttggctgtgt catggaaacc attgatggct tcgtagaaca
    14581 gcacaaaagc cagtgcaagc aataataaca gcccggtatg caaatccagg ccagcaaaca
    14641 aatgtagcat aggacgttac gccattttga ggacatgaac gcggcgcatt atcagtgact
    14701 ttcgcggcgc gggcaaagtg aaatatagac tttttttgat ttgcctcctg tatggatttc
    14761 actcaaaaaa taattatctt atataattca ggcaaatact tccttttagt aatattgatg
    14821 ctggtgcgac cactgaggaa tctttacaat tcacgcccgt tttttctaag aggagcgcaa
    14881 cgtggaaagg tttgatgcca ttattatagg cgctggtgcg gcgggtatgt tctgttctgc
    14941 gctggcaggt caggcaggac gccgggttct gctgatcgat aatggtaaaa aaccagggcg
    15001 caaaatcctt atgtctggcg gtgggcgctg caactttacc aacctttatg tcgaaccagg
    15061 cgcttatctg agccagaatc cgcatttttg taagtctgca ctcgcgcgtt ttacccagtg
    15121 ggatttcatt gatctggtca ataaacacgg catcgcctgg cacgagaaaa cgttaggaca
    15181 actcttctgc gatgactccg cgcagcagat tgtcgacatg ctggtggatg agtgcgagaa
    15241 gggcaatgta accttcagat tgcgtagcga agtgctgagt gtggcgaagg atgaaacagg
    15301 cttcacgctt gaactgaacg gcatgactgt cggttgcgaa aagctggtca tcgcgaccgg
    15361 tgggctgtca atgccggggc tgggcgcgtc gccgtttggt tataagattg ccgaacaatt
    15421 tggcctcaac gtgctgccga cccgcgcggg tctggtgcca ttcactctgc ataaaccgtt
    15481 gctcgaagag ttacaggtgc tggcgggcgt ggcggtgcct tccgtgatta ccgctgaaaa
    15541 cggcatcgtt ttccgtgaga acttactctt cacccatcgc ggcttgtctg gaccggcggt
    15601 gttgcagatt tccagctact ggcaaccggg tgaatttgtc agtatcaatc tgctaccgga
    15661 tgtggatctc gaaaccttcc tgaatgagca gcgtaacgca catccgaatc agagcctgaa
    15721 aaacacactg gcggttcatc taccgaagcg gttggttgaa cgcttacagc aactcgggca
    15781 aatcccggat gtttcgctaa aacagctcaa cgtgcgtgac caacaggcac tgattagcac
    15841 attgaccgac tggcgcgtac aacccaacgg cactgaaggc tatcgcactg ccgaagtgac
    15901 gctcggcggc gtggacacca acgaactctc ttcacggacg atggaagcgc gcaaagtgcc
    15961 tgggctgtac ttcatcggcg aagtgatgga cgttaccggc tggctggggg gctataactt
    16021 ccagtgggcg tggtcgagtg cgtgggcttg tgcgcaggat ttgattgcag cgaagtcgtc
    16081 ctgacctgtt acctaaagat gaaaattatt agagccgcat taaaaatgag ctaattttga
    16141 tagtggctat cttgtgatta ttttctaatg agcccgtgaa ctgaaaccct ccaggcttaa
    16201 tataaggtgg aaggaaaggt gattgaaaac tcacccagtg gccagatctt tataaaatat
    16261 gaacaggttg aaaaaaacag taactttgtt gtttttttat ccttaaccac tatgcattaa
    16321 tgctgcgtta tttcatgatg cctaagaaaa accagcgtta cgcaaatggt caacgctggt
    16381 tttatccggt acgttgcaat tattttttag cagaacctgc ttctaatatt gaaacgattg
    16441 agaacaacgt aaagcatacc gctcctaaac cgaccaaaac ccgcgaagga ataaaatatc
    16501 ccatgtcggt ctgcgccatt tccgcaagaa acgatgccag gaaaaggcaa aacaggcagg
    16561 tgaagacggg aatcatcggt attctgttgg ctaacgaaca ggtacgtctc cagaccagtg
    16621 ccagtagcca gacttttgag aatatgctgt aacagatcat tccgaggcaa atgaggataa
    16681 tgccgggagc cagtcgggcg cttgcatcgg agctgagtaa cacgtatatg ccctgcagca
    16741 ccgtgattga gccgagaaaa ataacccaat aacaccacag ccagtgttct ttagttgaaa
    16801 acgtattacg tgtttgatgg acaattgtgg caacaaggcc aattagacag gcacagattg
    16861 cggttaaccc aagcaatacg tgacccgcga cataatgcgg agttatgtca gcactacgta
    16921 acagcgtaat agaccaaatg aaaccgagca gggtgagtaa aacgggaacg gcaatgaggc
    16981 aattaccgat taatgaagaa taagcctgta ccggcgttcc atcgctcttg ctccccgctg
    17041 catttttggg aatgagcaga aagtgaccgg atgacgctgc caccgtcgat acacaggcgg
    17101 caatcatacc aacgccgaaa ataacatggc cggcgacaaa ctcgtctgcc atcacatcat
    17161 tgcctgctaa cagtgcccaa ccccatatca tggtgataat tgaccccgca tagccaataa
    17221 tggggaacaa tgtattgtaa aacgtattaa cgccgcgcgt gagctgcgaa atgataataa
    17281 atgcggtagt gaataatgcc aggcatatgg ccgccagaga aatcagcaca tgacccgcga
    17341 cgaaatactc gctttgccct gaactttcca gcacaaagcc acctaacgcg atgcaaatta
    17401 atcccataat caaagggatt aatttgaaaa gccacccgat atatatgttc actttaaact
    17461 cctcaggtat ccctgctaat aatgaaatgt gcattaatga taatttcagc ctgttaatat
    17521 aacgacgaga tatcattaaa gacaaatgca tagcataact atagcggggt ttactgt
//
LOCUS       DAPGWB010000093        17544 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.093, whole genome shotgun sequence.
ACCESSION   DAPGWB010000093 DAPGWB010000000
VERSION     DAPGWB010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17544
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.093"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(232..1260)
                     /gene="epmB"
                     /locus_tag="RHX79_002976"
     CDS             complement(232..1260)
                     /gene="epmB"
                     /locus_tag="RHX79_002976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HDV2198125.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITEALVERFARSTL
                     QILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQ"
     gene            1302..1868
                     /gene="efp"
                     /locus_tag="RHX79_002977"
     CDS             1302..1868
                     /gene="efp"
                     /locus_tag="RHX79_002977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDV2198126.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            1920..2045
                     /gene="ecnA"
                     /locus_tag="RHX79_002978"
     CDS             1920..2045
                     /gene="ecnA"
                     /locus_tag="RHX79_002978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HDV2198127.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            2156..2302
                     /gene="ecnB"
                     /locus_tag="RHX79_002979"
     CDS             2156..2302
                     /gene="ecnB"
                     /locus_tag="RHX79_002979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HDV2198128.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            2477..2794
                     /gene="sugE"
                     /locus_tag="RHX79_002980"
     CDS             2477..2794
                     /gene="sugE"
                     /locus_tag="RHX79_002980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter SugE"
                     /protein_id="HDV2198129.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(2791..3324)
                     /gene="blc"
                     /locus_tag="RHX79_002981"
     CDS             complement(2791..3324)
                     /gene="blc"
                     /locus_tag="RHX79_002981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin Blc"
                     /protein_id="HDV2198130.1"
                     /translation="MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRA
                     ALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(3413..4546)
                     /locus_tag="RHX79_002982"
     CDS             complement(3413..4546)
                     /locus_tag="RHX79_002982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HDV2198131.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPPEEKNYAWG
                     YREGKAVHVSPGALDAETYGVKSTIEDMACWVRSNMNPRDINDKTLQQGIQLAQSRYW
                     QTGDMYQGLGWEMLDWPVNPDSIINGSGNKIALAAHPVKAITPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAAWQILNALQ"
     gene            complement(4609..4968)
                     /gene="frdD"
                     /locus_tag="RHX79_002983"
     CDS             complement(4609..4968)
                     /gene="frdD"
                     /locus_tag="RHX79_002983"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HDV2198132.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            complement(4979..5374)
                     /gene="frdC"
                     /locus_tag="RHX79_002984"
     CDS             complement(4979..5374)
                     /gene="frdC"
                     /locus_tag="RHX79_002984"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HDV2198133.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            complement(5385..6119)
                     /gene="frdB"
                     /locus_tag="RHX79_002985"
     CDS             complement(5385..6119)
                     /gene="frdB"
                     /locus_tag="RHX79_002985"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur protein"
                     /protein_id="HDV2198134.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            complement(6112..7920)
                     /gene="frdA"
                     /locus_tag="RHX79_002986"
     CDS             complement(6112..7920)
                     /gene="frdA"
                     /locus_tag="RHX79_002986"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HDV2198135.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGVVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRLAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            8245..9222
                     /gene="epmA"
                     /locus_tag="RHX79_002987"
     CDS             8245..9222
                     /gene="epmA"
                     /locus_tag="RHX79_002987"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HDV2198136.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            9441..10943
                     /gene="yjeM"
                     /locus_tag="RHX79_002988"
     CDS             9441..10943
                     /gene="yjeM"
                     /locus_tag="RHX79_002988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418580.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/gamma-aminobutyrate family transporter
                     YjeM"
                     /protein_id="HDV2198137.1"
                     /translation="MPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIF
                     SALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVST
                     SAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARIT
                     AVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIF
                     AYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGS
                     VNLGNITYVLMKSLGVTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYS
                     PLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNK
                     LTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANV
                     FTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD"
     gene            complement(11094..14417)
                     /gene="mscM"
                     /locus_tag="RHX79_002989"
     CDS             complement(11094..14417)
                     /gene="mscM"
                     /locus_tag="RHX79_002989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="miniconductance mechanosensitive channel MscM"
                     /protein_id="HDV2198138.1"
                     /translation="MRLIITFLMAWCLSWGAYAATAPDSKQISQELEQAKAAKPAQPE
                     VVEALQSALNALEERKGSLERIKQYQEVIDNYPKLSATLRAQLNNMRDEPRSVSPGMS
                     TDALNQEILQVSSQLLDKSRQAQQEQERAREIADSLNQLPQQQTDARRQLNEIERRLG
                     TLTGNTPLNQAQNFALQSDSARLKALVDELELAQLSANNRQELARLRSELAEKESQQL
                     DAYLQALRNQLNSQRQLEAERALESTELLAENSADLPKDIVAQFKINRELSAALNQQA
                     QRMDLVASQQRQATSQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQ
                     QLDTEMAQLRVQRLRYEDLLNKQPLLRQIHQADGQPLTAEQNRILEAQLRTQRELLNS
                     LLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQDL
                     RRLISLDTFSQLGKASVMMLTSKETILPLFGALILVGCSIYSRRYFTRFLERSAAKVG
                     KVTQDHFWLTLRTLFWSILVASPLPVLWMTLGYGLREAWPYPLAVAIGDGVTATVPLL
                     WVVMICATFARPNGLFIAHFGWPRERVSRGMRYYLMSIGLIVPLIMALMMFDNLDDRE
                     FSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKEGSGDNITNHMLWNMMIGAPLVA
                     ILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRRWMLIQRRRLAFDRAKHRRAE
                     MLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLRLVRSILMLIALLSVIVLW
                     SEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLE
                     LAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFG
                     LQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNK
                     AFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLVIDNPAPEVFL
                     VDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQMRLESLNG
                     KQTGRTLTSAGKGRQAGSL"
     gene            complement(14439..15407)
                     /gene="psd"
                     /locus_tag="RHX79_002990"
     CDS             complement(14439..15407)
                     /gene="psd"
                     /locus_tag="RHX79_002990"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313166.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDV2198139.1"
                     /translation="MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKY
                     YKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEED
                     KILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYV
                     PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTIT
                     PPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSV
                     TKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV"
     gene            complement(15504..16556)
                     /gene="rsgA"
                     /locus_tag="RHX79_002991"
     CDS             complement(15504..16556)
                     /gene="rsgA"
                     /locus_tag="RHX79_002991"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HDV2198140.1"
                     /translation="MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIV
                     ISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE
                     RTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN
                     KIDLLDDEGMEFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV
                     GKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW
                     HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE
                     SMAQVKTRKNFSDTDD"
     gene            16651..17196
                     /gene="orn"
                     /locus_tag="RHX79_002992"
     CDS             16651..17196
                     /gene="orn"
                     /locus_tag="RHX79_002992"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HDV2198141.1"
                     /translation="MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGP
                     TIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS
                     PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQA
                     MDDIRESVAELAYYREHFIKL"
     gene            17407..17482
                     /locus_tag="RHX79_002993"
     tRNA            17407..17482
                     /locus_tag="RHX79_002993"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17440..17442,aa:Gly,seq:gcc)
BASE COUNT         4035 a         4542 c         4616 g         4351 t
ORIGIN      
        1 aacaacagca atgtatatga ataattaaag gttatgcaac gggcaaagat taaatttccc
       61 agtttaatga caggttgctg tacttgcgtt tgttgctctt gccggatgcg gcgtaaacgc
      121 cttatccggc ctacagttca ttgcaaatcc attcaatttc aatgcacgat gtaggcctga
      181 taagcgtagc gcatcaggca attttaatgt ttgacttccc tgtttaatca gttactgctg
      241 gcgtagctgg agatccagcg gcgttttgct gggttcgccg ccaatttctc gcgccagttt
      301 cggcaccaga tatcccgaca ccagtgtcag caactcacgc ataatctgcc gtgcttcgtc
      361 atcactcacc ataaaatgcg ccgcgccctg tactttatcg agcacatgca ggtaatacgg
      421 cattacgccg gcatcgaaca acgcattact caggtttgcc agcgtttgtg cgttatcgtt
      481 cacaccacgt aacagaacgc tctggttaag cagggtgaca ccgacacggc gcaatttagc
      541 catcgcctga cggaacgttt catctacctc attggcatga ttgatgtgat tcaccagcaa
      601 gatttgcagc gtagaacggg caaagcgttc aaccagcgcc tcggtgatac gtgccgggat
      661 cacaatcggc agacggctgt gaatccgcag acgtttgata tgcgggatgg cttccagttg
      721 tgtgagcaac cagtccagct cgtgatcttt cgccatcagc ggatcgccgc cggagaaaat
      781 catctcgtcc agttccggat gcgcagcaac atactcaaga gcagtctgcc agttacgctt
      841 gttgccctga ttttcggcat aggggaagtg gcgacggaag caatagcggc aatttaccgc
      901 gcagccgcct ttgaccagca aaagcgcccg gttgtggtat ttatgcaaca aaccaggcac
      961 tacgctgtgc tgttcttcca gcgggtcggt ggagaatccg gacgcgacga caaactcatc
     1021 ttgcgaggta agtacctgac gcaaaagagg atcgtccgga ttgcctttct ccatgcgatc
     1081 gataaatgag cggggcacac gcagggcaaa cagctttttg gcgctgcgtc cggccaacag
     1141 tttttcgtcc gcgtctatat tcaaaagacg cagaagttca tcaggatcgg tcacaacatc
     1201 ggcaagttgc gttaaccaat cttctctgga tggggtattt agggttacaa tatgcgccat
     1261 tttgtggctt agctaccaat taacaaattt cagagggcct tatggcaacg tactatagca
     1321 acgattttcg tgctggtctt aaaatcatgt tagacggcga accttacgcg gttgaagcga
     1381 gtgaattcgt aaaaccgggt aaaggccagg catttgctcg cgttaaactg cgtcgtctgc
     1441 tgaccggtac tcgcgtagaa aaaaccttca aatctactga ttccgctgaa ggcgctgatg
     1501 ttgtcgatat gaacctgact tacctgtaca acgacggtga gttctggcac ttcatgaaca
     1561 acgaaacttt cgagcagctg tctgctgatg caaaagcaat tggcgacaac gctaaatggc
     1621 tgctggatca ggcagagtgt atcgtaactc tgtggaatgg tcagccgatc tccgttactc
     1681 cgccgaactt cgttgaactg gaaatcgttg ataccgatcc gggcctgaaa ggtgataccg
     1741 caggtactgg cggcaaaccg gctaccctgt ctactggcgc tgtggttaaa gttccgctgt
     1801 tcgtacaaat cggcgaagtc atcaaagtgg atacccgctc tggtgaatac gtctctcgcg
     1861 tgaagtaatg cggttgtggt gcggcctgca ggctgcacca tcacttattc aggtcagaga
     1921 tgatgaaacg ccttatcgtt cttgttttgc ttgccagcac gctgctcacg ggctgtaaca
     1981 ccgctcgcgg tttcggcgaa gacatcaaac atctcggcaa ctccatctcc cgcgctgcca
     2041 gctaattttt cttctcttcc gaaaaatcat cagatttcca tcatttttgg cgatgttgtc
     2101 tattattaat ttgctatagg caaacataaa taacattacc taaaaggaag acgttatggt
     2161 gaagaagaca attgcagcga tcttttctgt tctggtgctt tcaacagtat taactgcctg
     2221 caacaccacg cgtggcgttg gtgaagacat ttctgatggc ggtaacgcga tttctggtgc
     2281 agcaacgaaa gcgcagcaat aagcaataac ggtacgacag ttatgtcgtg ccgtttgttt
     2341 ttttgcgata gtcacaaagg taatagttga aattcccctg ccacctggca aaatatccgt
     2401 tcaaccatca gctttgcagg acgacctgca aacgcctctt ttcaccgggg acggccccaa
     2461 ttctccggag cctgatatgt cctggattat cttagttatt gctggtctgc tggaagtggt
     2521 atgggccgtt ggcctgaaat atacccacgg ctttagccgt ttgacgccga gtgttattac
     2581 cgtgacggcg atgatagtca gtatggcgct acttgcctgg gcgatgaaat cgttaccagt
     2641 agggacggct tatgccgtgt ggacgggtat tggcgcagtc ggcgcggcca tcaccggcat
     2701 tgtgctgctc ggtgagtccg ctaacccgat gcgcctggcg agtctggcgt taatcgtatt
     2761 ggggattatt ggtctgaaac tcagcactca ctaactaccg ggctgctgta cccaaataaa
     2821 cttactgaca tcaaaccctt cccgggtcgc gactgccagc atctcctgtt tcacttcgtc
     2881 agaaatggtt ggcgtgcggg agagtatcca caggtagtcg cggtccgggc cgcaaaccag
     2941 cgcatggcgg tattcccgat caagtgcaat gacgttataa ccgccataga aaggaccaaa
     3001 gaatgacact ttcagcgcag cgcgtgttgg tgcgccggta aagtacgctt tcccttcact
     3061 ctgctgccac atttctctgt cagggttata gcctttattg atgacattca ggccgccgtc
     3121 atcacgcaga ctgtatgttg cggtgacttt ttccagtcca cgttcaaaac ggtgatcaaa
     3181 acgggcaatc tcataccagg taccgagata acgttttgcg tcgaaattat tcactactgt
     3241 tacgccacgc ggcggcgtag gagaactgca ggcaacgacc agaaatgcag ctgtcgctgc
     3301 ggcaacgaga gggagcaggc gcataaatgt ttccttactg gtttttttct aagtgtagat
     3361 gacagcaagg aaaagcgcag aaaaggtccg aaaattcgga cccgatgaaa ttttactgta
     3421 gagcgttgag aatctgccag gcggcggcga ctctcgctgg attgggatag tttttgttag
     3481 ccagcatcac tatacccagc tctttttctg gaataaacgc gacatagcta ccaaatccgc
     3541 cggttgcccc tgttttatgt acccatgatg cgcgtactgc aggagttggg ggcgtaatcg
     3601 cttttacagg gtgtgctgcc agtgcaattt tattgccact gccgttaatg atgctgtcag
     3661 gatttaccgg ccagtccagc atttcccagc ccaggccctg atacatatcg ccggtttgcc
     3721 agtagcgaga ttgtgccagt tgtatccctt gctgaagtgt tttgtcgttg atatcacggg
     3781 gattcatatt gcttcgtacc cagcaggcca tatcttcaat ggtcgacttc acaccataag
     3841 tttcagcatc taacgcccct ggcgaaacat gaactgcctt gccttcgcga tatccccagg
     3901 cgtaattctt ttcttctggg ggaggtacat taatccacgt atggttgagt ttgagtggct
     3961 ggaagacacg agtttgcatc gcctgctcaa aactcaaacc agacggcttc acagccagtg
     4021 cgccgaacaa accgatactg gagttggcat acagacgttg tgttcctgga gcccatgcag
     4081 gctgccagtt ttgatagaag cgcagcaagt cgcttgagga tttcacttca tccggcacct
     4141 gcaatggcag gccgccagcg gtgtaggtcg caagatgtaa tagtgtgatc ccattccact
     4201 gtttagcggt aagttcaggc cagtattttg ttgcgggatc gcttaacttg atttcccctc
     4261 gagcaatagc gtcgccacca agcacgcccg taaatgtttt gctgaccgaa cctaactcaa
     4321 acaacgtttg ctgtgtgacg ggctgctttt tggcgatgtc cgcatagccc caggtaaagt
     4381 aataaggttt accctgataa attaccgcca ccgccatacc ggggatcttt tgttgctcta
     4441 taagcggggt aattgtgcga tgcacaatat cgttgatttg ttgaggggca gcaaatgtgg
     4501 agcaagaggc ggtaattaat aaggcgcaga gcgtcgtttt gaacataagg tctggtttcc
     4561 atacaaaacg gcccgccata ggcgggccgg atttacattg gcgatacgtt agattgtaac
     4621 gataccaatc agcgtgacaa ctgtcaggat agcagccaga ccgtagaaaa cccatttgcc
     4681 cgcaggcacg tgaattttca gatcgtgcat cgcgtggtgc atacggtgta aaccacacca
     4741 cagcggcaga acgatcatca ggaacaggaa tacgcgacca atgaagctct gcgcgaacgc
     4801 cagaacgcgc tcgtagctca gcgcatcacc cggaaacagc cccagtggca gcagaatacc
     4861 caccagcagg atcatcaccg gcgcaataat tgcgctccac ataccaccgg ccccgaagag
     4921 gccccagaat accggttcgt cagaacgctt tggatttgga ttaatcatct caggctcctt
     4981 accagtacag ggcaacaaac aggattacga tggtggcaac cacagttacc gcccagagac
     5041 ttttgataat tggctctggt cccatttttt cgtcttttac aatgatattg gccgctttcg
     5101 gtgccagttc aaaccaggtt ttggtgtgca gcagagctgc cgccagagtg atcaggttaa
     5161 tgatcacgat aaccgggttt tgtaaaaagt cgacgaatcc cgcccaggct tccgggccat
     5221 ttttcagggc aaacagcccg aaaatcagtt caatgctgaa ccacacagcc ggaaccgccg
     5281 tgccttcgcg cagcatgtaa aagcgataaa acggcaattt tttccaccag gtggacgtca
     5341 ttggccgtac atacggttta cgtttagtcg tcatgttgca ctccttagcg tggtttcagg
     5401 gtcgcgataa gaaagtcttt cgaactttct actttgccct gctgaatggc cgcagccgga
     5461 tcgacgtgtt tcgggcagac ttcggagcaa tagcccacga aagtacagct ccatacgccg
     5521 ttctggctgt tcaactgcgc catacgctcc ttcttaccgt ggtcgcggct atcttcgtta
     5581 taacgatgcg ccagcgtaat ggcagccgga ccgatgaact ctgggttcag gccaaactgc
     5641 gggcacgcgg cgtagcacag accacagttg atgcaaccgg agaactggtg atactttgcc
     5701 atctgcgccg gggtctggat gttagtaccc tgatccgcgg tgcgggagtt gccgatgatg
     5761 tacggtttga tcgcttccag actttcgatg aagtgggtca tatcgaccac cagatcgcgt
     5821 tcaatcggga agttagctaa cgcttcaacc ttcataccgt cggtgtaatc acgcaggaag
     5881 gttttacatg ccagttttgg cacgttgtta accatcatgc cgcaggaacc acaaatcgcc
     5941 atacggcagg accagcggta actcaggtcc ggtgccaggt tgtctttgat gtagcccagc
     6001 gcatccagta atgaggtagt tgcgtcataa ggcacttcat agaatgcgct atgcggtgcg
     6061 gtatcgactt ccgggttata gcgcaccacc tcaattttca ggtttttcat ctcagccatt
     6121 cgccttctcc ttcttattgg ctgcttccgc cttatcggct gcatccgctt cgccaccgta
     6181 aacacgttta gctggcggca gcgtagtaat cttcacgtcg ctgtactcca ggcgagtcgt
     6241 gccatcagca tcgcggaagg cgagggtgtg tttgaggaag ttgacgtcgt cacgctcggt
     6301 gcaaccttcg tccagacgct ggtgtgcgcc gcgggactct ttacgtgcca ttgcggagtg
     6361 cgccatacat tcagcaacgt tcagaccgtg gcccagttca atggtgtaga gcaggtcggt
     6421 gttgaacacg ctggaggtgt cggtgatgcg cacgcgcttg aagcgttcct gcagctctgc
     6481 cagcttgtcg atggttttct gcatcagttc cggcgtacgg tagataccgc aaccttcttc
     6541 catagccaga cccatttcgt cgcggatctt cgcccagttt tcgccgccat cctggttaac
     6601 cagatctttc agacgttgtt caacgccagc tgcctgcgct tcaattgccg cttcgttgcc
     6661 attaccggca gttgctgcac gctctgtcgc ttgttcaccg gccagacggc cgaagaccac
     6721 cagttccgcc agggagttgg agcccagacg gtttgcaccg tgcagaccaa cagaggaaca
     6781 ttcacccacg gcgaacagac ctttaatgcg ggtttcacag ttctgatcgg tttcgatacc
     6841 gcccatggtg tagtgtgcgg tcggacgtac cggaatcggt tctttaaccg gatcgacgcc
     6901 aacgtacgct ttcgccagtt cgcagatgaa cggcagacgt tcatgcagtt ttttctcgcc
     6961 gaggtgacgc aggtcgagat aaaccacatc gccacgcggc gtggagatgg tgttgccttt
     7021 acgccattcg tgccagaagg cctgagaaac tttgtcgcgt ggacccagtt ccatatattt
     7081 gtttttcggc tcgcccagcg gagtttccgg gcccatgccg taatcttgca gataacggta
     7141 gccatttttg ttgaccagaa taccgccttc accgcggcag ccttcggtca tcaggatacc
     7201 ggaacctggc agaccggttg ggtgatactg aacgaattcc atgtcacgca gcggaacgcc
     7261 gtggcttagc gccataccca taccgtcacc ggtaacgatg ccgccgttgg tgttgtaacg
     7321 ataaacgcga cccgcaccgc cagtagccat aacgaccgcg ttagcacgga tctgcaccag
     7381 cgtgccttcc atcatgttca ttgctaccac gccgcgaaca tgaccatcat caaccagaat
     7441 atccagcacg aaatgttcgt caaaacgctg gatctgcggg aattgcagag aggtctggaa
     7501 cagcgtgtgc agcatatgga agccggtctt atcggcggcg aaccaggtgc gctcgatttt
     7561 catgccgccg aagcgacgta cgttgacgct accatccggg cgacggctcc atgggcaccc
     7621 ccacagttcc agttgggtca tttcggttgg gcagtggtgg acgaaataat ccacgacatc
     7681 ctgctcacac aaccagtcgc cacccgctac tgtatcgtga aagtgatatt cgaagctgtc
     7741 atgatcctgc gcgacagcgg cggagccccc ttctgcagca acggtatggc tacgcatcgg
     7801 gtatactttt gagattagtg cgatttttgc atttggattt gcctgcgcgg cagcaattgc
     7861 agcacgtaat cccgcgccac cggcgcctac aatggcaaga tcggcttgaa aggtttgcac
     7921 gacattcctc cagattgttt ttatcccaca gccccgtact tcagggtaag tgcctgaaag
     7981 ttacggtctg cgaacgctat tccactgctc ctttataggt acaacagtat agtctgatgg
     8041 ataagtctga aatttgacga gatcgatttt tttagtgcgc aagagggcta aattatcact
     8101 gaagatgatt aatttaatta ctaaaccatc agatcgtgct ttttttagtc actgcccacc
     8161 gctgtttgat tcctgcgtaa aatttgtctc gccgtcgcgt tgcgagtaga cttcgtgccc
     8221 ttgtcaaaaa ctggagattt aactatgagc gaaacggcat cctggcagcc gagcgcatcc
     8281 attcctaact tattaaaacg cgcggcgatt atggcggaga tccgtcgttt ctttgccgat
     8341 cgtggagtgc tggaggtgga gacgccttgt atgagccagg cgacggtaac cgatattcat
     8401 ttggtcccgt ttgagacacg tttcgttggc cccgggcatt cgcaggggat gaatctctgg
     8461 ttaatgacca gcccggaata ccatatgaaa cgcctgctgg ttgccggttg tgggccggta
     8521 ttccagctgt gccgcagctt ccgtaatgaa gagatggggc gttatcacaa ccctgagttc
     8581 actatgctgg agtggtatcg accgcactat gatatgtacc ggttgatgaa cgaggtggac
     8641 gatctcttac aacaggtgct ggactgcccg gcagcagaaa gcctttctta tcaacaagct
     8701 ttcttgcgtt atctggaaat tgacccgctc tctgccgaca aaacgcaact gcgggaagtc
     8761 gcagcgaaac tggatttgag caatgttgct gataccgaag aagaccgcga cacgctgcta
     8821 caattgctgt ttacctttgg cgtagagcca aatattggca aagaaaaacc gacctttgtg
     8881 taccactttc cagccagcca ggcatcactg gcgcaaatca gtaccgaaga tcatcgggtc
     8941 gctgaacgct ttgaggttta ttataaaggt attgagctgg cgaatggttt ccatgaattg
     9001 acggatgccc gtgagcagca acaacgcttt gaacaagata accgtaagcg cgcggcgcgc
     9061 ggtttgccgc agcaccccat tgaccagaat ctgattgaag ccttgaaagt cggtatgcct
     9121 gactgttccg gcgtggcatt aggtgttgat cgtctggtga tgttggcgct gggcgcggag
     9181 acactggctg aagtcatcgc ctttagcgtt gaccgggcat aattctgaaa aattactgaa
     9241 ttaacagcga agaatggcgt gataagcgcc attctgtagc atatgttttc atttttccgt
     9301 taaaggccac aatttaagac tggatatttg atatcatcca ggtatcaatt ctgtattggt
     9361 ttttacgctg cctgctcaat gttgcgcagt gcagttcagt gggcacgtgt tatacacgcg
     9421 ctgaaatgaa ggatggtttc atgcctcaca cgataaaaaa gatgagtctg ataggactca
     9481 tattgatgat ctttacttcc gtatttggat ttgccaatag cccatcggct tattacttaa
     9541 tgggttatag tgcgattccc ttttatatat tttctgcatt gttattcttt attccattcg
     9601 ccttaatgat ggctgaaatg ggagctgctt atcgcaaaga agaaggtggt atctattcct
     9661 ggatgaataa tagtgtcgga ccacgttttg ccttcattgg tacgtttatg tggttttcct
     9721 cttatatcat ctggatggtg agtacctccg cgaaagtttg ggtaccgttc tcaacattcc
     9781 tctatggtag cgacatgacc cagcactggc gtattgctgg actggagcct acgcaggtgg
     9841 ttggtctgct ggcagtggca tggatgattc tggtcaccgt cgttgcttca aaggggatta
     9901 ataaaattgc ccgcattact gcggtgggcg gtattgcagt aatgtgtctg aatttagtat
     9961 tgctgttagt aagcattact attttgttat taaatggtgg gcatttcgcg caggatatta
    10021 atttccttgc atcaccgaac ccaggttatc agtccggtct ggcaatgcta tcgtttgtgg
    10081 tatttgctat ttttgcctat ggcggaattg aagcggttgg tggtctggtc gataaaacgg
    10141 aaaatccaga aaagaacttt gccaaaggta ttgtttttgc cgctattgtt atttcaatcg
    10201 gttattcgct ggcaatattt ttatggggtg tcagcacaaa ctggcagcag gtattaagta
    10261 atggttccgt taaccttggc aatattacct atgtgctgat gaagagcctc ggggtgacgc
    10321 tgggtaacgc actgcatttg tcacctgaag cgtcattgtc gctgggcgta tggtttgcgc
    10381 gtattaccgg actttcgatg ttcctcgctt ataccggtgc gttctttacg ctttgctatt
    10441 caccgctgaa agccatcatc caggggacgc cgaaagcgtt gtggccggaa ccgatgacgc
    10501 gcctgaatgc gatggggatg ccgtctatcg ccatgtggat gcagtgcggg ttggttactg
    10561 tcttcatcct gctggtttcg tttggtggcg gtaccgcatc cgcgttcttt aacaagctga
    10621 cgctgatggc gaacgtgtct atgacgcttc cttacctgtt cctcgcgctg gctttcccat
    10681 tctttaaagc acgtcaggat ctcgacagac catttgtgat tttcaaaacg cgtatgtcgg
    10741 caatgattgc gacggtggtt gtcgtactgg tggtgacatt tgcgaacgtc ttcaccatca
    10801 ttcaacctgt ggttgaagcc ggagactggg acagcacatt gtggatgatt ggcggccctg
    10861 tcttcttctc gctgttagcg atggcgattt accagaacta ttgcagtcgc atggcgaata
    10921 aacctgagtt agctctcgac tgatcatatg aaatcctgca actcatcgtc tctccggcga
    10981 tgagttgtca ggaagtaatg cgtatggatg atactctcca gggccggtga taactgaaga
    11041 tgatgttaag ctgctaaatg agccacgttg acatcatttg gcagcttcat gcattacaaa
    11101 cttcccgcct gacgaccttt gcccgcagaa gttaatgttc tccccgtttg cttaccgttg
    11161 aggctttcca gacgcatctg gaagggcggg aatggcatat cgataccgtg ggcgtggaag
    11221 cctgccagaa tcagctggtg gatctcatgg cgtagcggca tacggtgacc catctcagcg
    11281 gcgtaaatac gcagctcgaa aatctgaatc ccctgttgca gatccaccag gaagacttcc
    11341 ggtgccgggt tgtcgatcac cagcgagcag cgacgcgctg cggtgagcag gatttccgtc
    11401 acttcttcgc tattggcatc ggcaggggcc ggtatcgtca acaccacgcg cgtgaccgag
    11461 tcagagagcg accagttgat aaactgctcg gtaataaacg ccttgttcgg cacgattatc
    11521 tctttacggt cccagtcgct gatggtggtg gcgcgggtgt taattttcgt cacgctaccg
    11581 gtaagatcgc ggatcgttac cgtatcgcca atgcgaatcg gtttttcgaa caggataatc
    11641 aggccagaga taaagttggc gaaaatctcc tgcaaaccaa aaccgagacc aacaccgagc
    11701 gcggcaacca gccactgcaa tttcgaccac tcaataccaa tcatcgagaa gccgaccagc
    11761 ccgccaatca gcatcagcag atatttggtg atggtggtga tggcgtagcc cgtacccggc
    11821 gttaaatcca ggtgctgcaa aatcgccagt tccagcagcg cgggcaggtt gcgcaccagc
    11881 tgcgtggtga tgataaacac cagaatggca atcagcaccg caccgagggt aattggctcc
    11941 agactttcta cgccctgtac cgtggaggtg acatcccaca gcgaaatatt ttcgaggaag
    12001 ccgaaagcgg aatggatttc tgaccacagc acaatgacag aaagcagggc gatcaacatc
    12061 aaaattgagc gcaccagccg caaggattgc gcactgatgg catcgagatc gacttcgctt
    12121 tcatcgactt caattgcccc ttccgggcta ctgtgatgat gcgcttcctc ttcgccacgc
    12181 gcgcgttgcg ctaacatctc tgcccggcga tgcttcgccc ggtcaaacgc cagcctgcga
    12241 cgctggatca gcatccagcg gcggataacg tgataaacca ccagtagcag gaaccagatg
    12301 gcaaccgagg tttcaagcct cgctaacagt gcctgcgccg ttgccagata acccaccgct
    12361 gacgccagaa tggcgaccag tggcgcgcca atcatcatgt tccacagcat atggttggta
    12421 atgttgtcgc cgctgccttc tttgttgaga tacagcggga tcccggcctt tttcaggctg
    12481 agggtgacca ccgccagcgc accgcaaatg aggataaagc aaagccgtcc cagcgaaccg
    12541 gaaaactcgc ggtcgtcgag gttatcgaac atcatcagcg ccataatcag tggcacaata
    12601 agcccgatgc tcatcaggta gtagcgcatc ccacgggaaa cccgttcgcg cggccagcca
    12661 aaatgagcga taaacaagcc gtttgggcgg gcaaaagtag cgcaaatcat cactacccac
    12721 agcagcggca cggtggctgt tacgccatcg ccaatcgcga ccgccagcgg ataaggccac
    12781 gcctcgcgca agccgtaacc cagcgtcatc cacagcaccg gcagcggtga cgcgacgaga
    12841 atcgaccaga aaagagtgcg caacgtcagc cagaagtgat cctgagtcac tttgccgact
    12901 ttcgccgccg aacgttcaag aaaacgggtg aaatagcggc gcgagtaaat actgcaaccg
    12961 accagaatca acgcgccaaa cagcggcaaa atcgtctctt tgctggtcag catcatcaca
    13021 ctggctttgc ccaactgact gaaggtgtcc agcgaaatga gacgacgcag atcctgggcg
    13081 atttccagcg gccaggcgat ggtcatcggg cgcacgtcag aggtccagaa cagatagcgg
    13141 tgcgttgctt cgttcacctc tttcagcgca tcctccagtt gcccgttgga gactttcagc
    13201 ttggtcagtt ccagtagtag cgtgtcgcca ccctgcaaca atgagttcag caactcacgc
    13261 tgagtgcgca gttgtgcttc cagaatacgg ttttgctcgg cggtcagcgg ctgaccgtcg
    13321 gcctgatgga tttgccgtag cagcggctgt ttattaagca gatcctcata acgtaaccgt
    13381 tgcacacgca actgcgccat ttcggtatca agctgttgtg gtttcggcat ttccggcagc
    13441 cgtgccacct gcgcccgcaa cgcttcgccg agcaggttgg acgatcccag ccattgcgac
    13501 tgttcacgca gcgtattcag cgcctgccga acctgtaacg tctggctggt ggcctggcgc
    13561 tgttgcgagg caacgagatc catccgctgc gcctgttgat tcagtgccgc cgatagttcg
    13621 cggttaattt tgaattgcgc gacgatgtct ttcggcaaat cggcgctgtt ttctgccagc
    13681 aattcggtac tttccagcgc ccgctccgcc tcaagctgac gttggctgtt caactgatta
    13741 cgtaaggcct gcaaatacgc atccagttgc tggctctctt tttccgccag ctctgagcgt
    13801 aagcgcgcta attcctgacg gttattggca gacagctgcg ccagttccag ttcatcaacg
    13861 agcgctttca ggcgtgcgga gtcagactgc aacgcgaaat tttgtgcctg attgagcggg
    13921 gtattgccag taagcgttcc caggcggcgc tcgatctcat ttaactgacg gcgggcgtcg
    13981 gtttgctgtt gcggcagttg attcagcgaa tcggcaatct cgcgggcgcg ctcctgctct
    14041 tgctgggcct gacggctttt atccagcaac tggctgctga cctggagaat ttcctgattc
    14101 agcgcgtcgg tagacatccc cggcgacacg ctgcgcggtt cgtcacgcat attgtttaat
    14161 tgtgcgcgca gagtagcgga aagtttcggg taattatcaa tgacttcttg atattgcttg
    14221 atgcgctcaa gggaaccttt tcgttcctca agcgcattta aggcggactg gagcgcctct
    14281 acgacttccg gctgcgcggg tttcgccgct tttgcctgct ccagttcttg tgagatttgt
    14341 ttgctatcgg gggccgtcgc ggcgtacgcc ccccaactga ggcaccaggc catcagaaaa
    14401 gtgataatca ggcgcacgtc agcgtttcct ttgatggatt agacctggtc ttttttatcg
    14461 tcaaccaatg ggctggcgtc gtgttctgct tcgatctctt cagcaggaag cggggccggt
    14521 tcagcgtctg gcgtaacaaa ggtttcggta gatactgcca gcggctgacc aattttcgta
    14581 acagacaggc tttccagttg ctcaaccagg ttcactttac ctggtgcaaa caggttgata
    14641 acggtagagc cgagtttaaa gcgccccatt tcctggcctt tcagcagtgc cacagaaccg
    14701 tcgttttccc cggcaggcca ggtccagcgc ttgatgatac cttcgcgcgg cggcgtaatg
    14761 gtgcccgccc agaccgtctc aatgctgcct acaatcgtcg ccccgaccag aatctgcgcc
    14821 atcgggccaa attcggtatc gaaaaggcaa atcacgcgtt cgttacgggc aaacagattc
    14881 ggcacgttct gagccgtgag atggttaacg gagaagagat cgcccggtac gtagatcatc
    14941 tcacgcagaa taccgttgca cggcatgtgt acgcgatggt agtcacgcgg ggagaggtaa
    15001 gtggtcacaa acgtaccgtt gcggaacagg tccgccatca gatagttgcc tgccagcagg
    15061 gcttcgaggc tgtagttgtg gcctttggct tgcaggattt tatcttcttc gattttaccc
    15121 aactggctga taacgccatc ggcaggcatg accaggacat tcggatcggt atcgattggg
    15181 cgtacttcgt cacgcagcgg acggacaaag aattcgttaa aggtgcggta gctggcggtg
    15241 tccggctttt gcgcctcttt catgtcgacc ttgtagtatt taacgaacag atcgataacc
    15301 agttttgtca gccatcctgc ccgcttgctt gcgccccaac ccgccaggcg agtaagccat
    15361 agtttcggca gaatgtactg tagcgaaagt ttaaatgaat ttaacaaggt agcctccagg
    15421 ccattgtttt gtcgttcctg atccggccta catgccggat cctgaaaaaa aggggacgat
    15481 tctaacgacg gttagcttaa ttgtcagtca tccgtatcag aaaagttttt acgcgttttt
    15541 acctgcgcca tgctttccag aatacggtga tagttttcga aacgggtttc cgcgattttc
    15601 ccttcctcaa ccgcttcccg gatagcgcag cccggatcgg tatcgtgttt gcaatcgcga
    15661 tatttacaca gacctaaata gtcatggaat tcgacaaagc cctgagtgat ttgttccggc
    15721 tccaggtgcc agaggccgaa ctcacgcaca ccaggggaat caatcacatc accgccgtgc
    15781 gggaagtgat acaggcgtgc ggcggtcgtg gtgtgctgac cgagccccga gttgtcagag
    15841 acatcgttgg tcaggatctc tttttgcagc cccagcaacg cgttcagcag gctggattta
    15901 ccaacgccag actgcccggc aaaaatgctg atgcgcccgg tcaacgcctc ttccagcggt
    15961 tttagcccat cctgagtatg gctggaaacc atcaatacgc gataaccgat attgcggtag
    16021 atatccatct gctcgttgac gaactccata ccttcgtcgt ccagcaggtc tatcttgttg
    16081 agcacaataa tcggctcaat ctgcaaggtt tcgcaggcca ccagataacg gtcgataata
    16141 ttgagcgaca gctccggcaa aatggcggag acaatgacaa tctggtcgat gttggcggca
    16201 ataggtttca cgccgtcgta gaaatccgga cgcgtcaaca ccgaggtgcg ctcatgcacc
    16261 gcttccacga tccctttgac atttacgcct tccgccgccg gtttacccgg acgccagact
    16321 acgcggtcgc cggtcaccag cgaacggatg gtacggcgaa tattgcagcg gtgaacgtcg
    16381 ccatcggcgg attccacatc agcgtgcata ccaaagcggc tgatgacgat accttcatca
    16441 ggctcgccaa acagattgtc gtcgtagtcg ggcttctcct tagacgtttt aagacgacgc
    16501 tggtgattgg cgttcacgcg gcgctgctgg cctttggaga gtttattttt actcaatcgt
    16561 acagactcct ggtcgcccct gatgggcaaa acatctatga tacacgcaat tgtggatcaa
    16621 tatagtcact gtgaatgggt ggaaaatagc atgagtgcca atgaaaacaa cctgatttgg
    16681 atcgatcttg agatgaccgg tctggatccc gagcgcgatc gcattattga gattgccacg
    16741 ctggtgaccg atgccaacct gaatattctg gcagaagggc cgaccattgc agtacaccag
    16801 tccgatgaac agctggcgct gatggatgac tggaacgtgc gcacccatac cgccagcggg
    16861 ctggtggagc gcgtgaaagc gagcacgatg ggcgatcgtg aagctgaact ggcaacgctc
    16921 gaatttttaa aacagtgggt gcctgcgggt aaatcgccga tttgcggtaa cagcatcggt
    16981 caggatcgtc gcttcctgtt taaatacatg ccggagctgg aagcctactt ccactaccgt
    17041 tatctcgatg tcagcaccct gaaagagctg gcgcgccgct ggaagccgga aattcttgat
    17101 ggttttacca aacaggggac gcatcaggcg atggatgata tccgtgaatc ggtggcggag
    17161 ctggcttact accgcgagca ttttatcaag ctgtaaaatt tttgctggtc acgtaagcgc
    17221 cggaatccac ttgcggcggc gtgatattga cgctaaattg aacgtcttgc tgataatttc
    17281 agcacttgag ataaaaactc aaaaaaaatt ttttaggggg gttgcagagg gaaagatttc
    17341 tcgtataatg cgcctcccgt aacgacgcag aaatgcgaaa attacgaaag caaaattaag
    17401 tagtacgcgg gaatagctca gttggtagag cacgaccttg ccaaggtcgg ggtcgcgagt
    17461 tcgagtctcg tttcccgctc caaaatttga aaagtgctgc aaagcacaga ccacccaagc
    17521 gggaatagct cagttggtag agca
//
LOCUS       DAPGWB010000094        17446 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.095, whole genome shotgun sequence.
ACCESSION   DAPGWB010000094 DAPGWB010000000
VERSION     DAPGWB010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17446
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.095"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(101..832)
                     /gene="rlmB"
                     /locus_tag="RHX79_002994"
     CDS             complement(101..832)
                     /gene="rlmB"
                     /locus_tag="RHX79_002994"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDV2198142.1"
                     /translation="MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALE
                     SQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDG
                     VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLART
                     MRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM
                     AGSVSSLNVSVATGICLFEAVRQRS"
     gene            complement(1012..3453)
                     /gene="rnr"
                     /locus_tag="RHX79_002995"
     CDS             complement(1012..3453)
                     /gene="rnr"
                     /locus_tag="RHX79_002995"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HDV2198143.1"
                     /translation="MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVEL
                     HIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVE
                     GRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEA
                     GVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNM
                     GTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDA
                     RDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLP
                     EVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQG
                     DQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAERRIERIEQT
                     QRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLEL
                     PGGNKPEPRDYAELLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHF
                     TSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRAD
                     EATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYY
                     RFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTARE
                     KAKKGDAGKKGGKRRQVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIA
                     AATKAKRAAKKKVAE"
     gene            complement(3492..3917)
                     /gene="nsrR"
                     /locus_tag="RHX79_002996"
     CDS             complement(3492..3917)
                     /gene="nsrR"
                     /locus_tag="RHX79_002996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide-sensing transcriptional repressor
                     NsrR"
                     /protein_id="HDV2198144.1"
                     /translation="MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVK
                     IINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPAC
                     RLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE"
     gene            complement(4122..5420)
                     /gene="purA"
                     /locus_tag="RHX79_002997"
     CDS             complement(4122..5420)
                     /gene="purA"
                     /locus_tag="RHX79_002997"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDV2198145.1"
                     /translation="MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTL
                     VINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSE
                     ACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAE
                     KLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDF
                     VMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGA
                     GPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLD
                     VLDGLREVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGL
                     PQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA"
     gene            complement(5524..5721)
                     /locus_tag="RHX79_002998"
     CDS             complement(5524..5721)
                     /locus_tag="RHX79_002998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HDV2198146.1"
                     /translation="MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRR
                     FGGGLVVAGVVVYYMLRKTIG"
     gene            complement(5803..6807)
                     /gene="hflC"
                     /locus_tag="RHX79_002999"
     CDS             complement(5803..6807)
                     /gene="hflC"
                     /locus_tag="RHX79_002999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HDV2198147.1"
                     /translation="MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNK
                     PLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSR
                     YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSA
                     GTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTE
                     VSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGD
                     AEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR
                     "
     gene            complement(6810..8069)
                     /gene="hflK"
                     /locus_tag="RHX79_003000"
     CDS             complement(6810..8069)
                     /gene="hflK"
                     /locus_tag="RHX79_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HDV2198148.1"
                     /translation="MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDI
                     FRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKE
                     AERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVE
                     MNVQYRVTNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQR
                     ELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQ
                     PRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPEITRERLYIETMEKV
                     LGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGTSNLLRLPPASSSTTSGASN
                     TSSTSQGDIMDQRRANAQRNDYQRQGE"
     gene            complement(8155..9435)
                     /gene="hflX"
                     /locus_tag="RHX79_003001"
     CDS             complement(8155..9435)
                     /gene="hflX"
                     /locus_tag="RHX79_003001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HDV2198149.1"
                     /translation="MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQV
                     ITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVID
                     RTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL
                     ETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRIT
                     EARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQ
                     ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEE
                     NKPIRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKE
                     WMEEDGSVSLQVRMPIVDWRRLCKQEPALIDYLI"
     gene            complement(9512..9820)
                     /gene="hfq"
                     /locus_tag="RHX79_003002"
     CDS             complement(9512..9820)
                     /gene="hfq"
                     /locus_tag="RHX79_003002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HDV2198150.1"
                     /translation="MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE
                     "
     gene            complement(9906..10856)
                     /gene="miaA"
                     /locus_tag="RHX79_003003"
     CDS             complement(9906..10856)
                     /gene="miaA"
                     /locus_tag="RHX79_003003"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDV2198151.1"
                     /translation="MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSA
                     LIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIP
                     LLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARI
                     HPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRF
                     HQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATR
                     QLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG"
     gene            complement(10849..12696)
                     /gene="mutL"
                     /locus_tag="RHX79_003004"
     CDS             complement(10849..12696)
                     /gene="mutL"
                     /locus_tag="RHX79_003004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HDV2198152.1"
                     /translation="MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDI
                     DIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASI
                     SSVSRLTLTSRTAEQQEAWQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKF
                     LRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT
                     AFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQAC
                     EDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL
                     ETPLPLDDEPQPAPRAIPENRVAAGRNHFAEPAAREPVAPRYTPAPASGSRPAAPWPN
                     AQPGYQKQQGEVYRQLLQTPAPMQKLKAPEPQEPALAANSQSFGRVLTIVHSDCALLE
                     RDGNISLLSLPVAERWLRQAQLTPGEAPVCAQPLLIPLRLKVSAEEKSALEKAQSALA
                     ELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQWIARNLM
                     SEHAQWSMAQAITLLADVEQLCPQLVKTPPGGLLQSVDLHPAIKALKDE"
     gene            complement(12706..14043)
                     /gene="amiB"
                     /locus_tag="RHX79_003005"
     CDS             complement(12706..14043)
                     /gene="amiB"
                     /locus_tag="RHX79_003005"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiB"
                     /protein_id="HDV2198153.1"
                     /translation="MMYRIRNWLVATLLLLCTPVGAATLSDIQVSNGNQQARITLSFI
                     GDPDYAFSHQSKRTVALDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDL
                     TENGKTEAVKRQNGSNYTVVFTINADAPPPPPPPPVVAKRVETPAVVAPRVSEPARNP
                     FKTESNRTTGVISSNTVTRPAARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNV
                     TIAIARKLRTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNR
                     SATGASVWVLSNRRANSEMASWLEQHEKQSELLGGAGDVLANSQSDPYLSQAVLDLQF
                     GHSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGVLRSPDIPSVLVETGFISNNSEE
                     RLLASDDYQQQLAEAIYKGLRNYFLAHPMQSAPQGATAQTASTVTTPDRTLPN"
     gene            complement(14062..14523)
                     /gene="tsaE"
                     /locus_tag="RHX79_003006"
     CDS             complement(14062..14523)
                     /gene="tsaE"
                     /locus_tag="RHX79_003006"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDV2198154.1"
                     /translation="MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTF
                     SRGFLQALGHQGNVKSPTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFAND
                     AICLVEWPQQGTGVLPDPDVEIHIDYQAQGREARVSAVSSAGELLLARLAG"
     gene            complement(14495..16042)
                     /gene="nnr"
                     /locus_tag="RHX79_003007"
     CDS             complement(14495..16042)
                     /gene="nnr"
                     /locus_tag="RHX79_003007"
                     /EC_number="4.2.1.136"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HDV2198155.1"
                     /translation="MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLR
                     AGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLLAQESDKPLP
                     EEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSH
                     PAPIVAVDIPSGLLAETGATPGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLG
                     LDSWLAGQETKIQRFSAEQLSHWLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEA
                     ALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEWADVVVIGPGLGQQE
                     WGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIES
                     DRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGA
                     LLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGMLATDLFSTLQRIVNPEVTDKNHD
                     ESSNSAP"
     gene            16041..17180
                     /gene="queG"
                     /locus_tag="RHX79_003008"
     CDS             16041..17180
                     /gene="queG"
                     /locus_tag="RHX79_003008"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HDV2198156.1"
                     /translation="MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWL
                     DKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVS
                     RYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKH
                     SLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARR
                     CISYLTIELEGAIPEELRPLMGNRIYGCDDCQLICPWNRYSQLTTEDDFSPRKPLHAP
                     ELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEH
                     PLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA"
     gene            complement(17163..17216)
                     /locus_tag="RHX79_003009"
     CDS             complement(17163..17216)
                     /locus_tag="RHX79_003009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198157.1"
                     /translation="MRFYFYSQAVDESGVTR"
BASE COUNT         3958 a         4974 c         4374 g         4140 t
ORIGIN      
        1 aatattaata aaatgaatat ttgcagtacg taattatctt accagctata gacaaaaaaa
       61 aaccatccaa atctggatgg cttttcataa ttcagacgaa ctagctgcgc tgacgaaccg
      121 cttcaaataa gcaaattccg gttgcaaccg aaacgttcag ggaagaaaca cttcctgcca
      181 ttgggatgct gatcaactca tcgcaatgtt cacgggtcag gcgacgcata ccttcacctt
      241 ccgcgcccat caccagcgcc aggcgtccgg tcattttgct ctgatagagt gtatgatccg
      301 cctcgcctgc cgtaccgacg atccagatat tctcttcctg caacatacgc atggtgcgcg
      361 caaggttagt cacccgaatc agtggaacgc tttctgccgc gccgcaggct acttttttcg
      421 ccgtagcgtt gagctgtgcg gagcgatctt tcggcacaat caccgcgtga acgccagcag
      481 cgtccgcgct acgcaggcac gcgccgaggt tgtgcggatc ggttacaccg tcgaggatca
      541 gcaggaacgg ttgatcgagc gaagcgatca gatccggcag atcgttttcc tgatactgac
      601 gtcctggctt cacgcgggcg ataatgccct gatgcacggc accgtcgctt ttctcgtcga
      661 gatattggcg gtttgccaac tggataacca cgccctgaga ctcaagggcg tgaatcagcg
      721 gtaacagacg tttatcttca cggcctttta aaataaagac ttcctgaaaa cgttcagggg
      781 cgcgctccag cagggcctgc actgcgtgga tgccgtaaat catttcgctc attaatgtac
      841 tcgttgttta cgttttgcct gatgcactac gtttatccgg cctacatgat ctctgcaata
      901 tattgaattt gcgtgattat gtaggccgga taaggcgttc acgccgcatc cggcatgaac
      961 aaagcgcatt ttgtcagcaa tctaaccctc ttcttttaaa gagggtattg atcactctgc
     1021 cacttttttc ttcgccgcac gcttcgcttt ggtcgctgcg gctattttct gcgttttcgc
     1081 cgatggcttt ttcgcttttc tcgcgtcttt cttcgccgct ttcggcttcg tttttttctc
     1141 accgcggaag gcgctgtctg gctcaaagtt taccttttta ccgacctgac gacgcttgcc
     1201 gccttttttg cctgcatcgc cttttttcgc tttctcgcgc gccgttttac cgacgttgcg
     1261 cggtgcgcgt tcactggaga tcagactaaa gtcgattttg cgctcgtcca tattaaccgc
     1321 ttcgacgcga acttccacgc gatcgcccag gcgataagtc tggccgctgg attcccccat
     1381 caggcgttgc cctacctggt caaagcgata gtagtcattg tccagcgaag agacatggac
     1441 cagaccatca atgaacaagt cgtccagacg gacgaagaag ccaaagccag tgacgctgga
     1501 aattacgcct ttaaagacgt tacctacctg gtcgagcatg aagtcacact tcagccagtc
     1561 agcgacatcg cgcgttgctt cgtcggcacg acgttccgcc atcgaacagt gctgacccag
     1621 ttgcaacatc tcttccatcg aataatggta gccgccggtt tcagtggtgt tgccctgatg
     1681 cccctgctct ttcgccagca gatatttaat ggcgcggtgc agcgtcaggt caggataacg
     1741 acgaatcggc gaagtaaagt gcgcatagga ctgcaatgcc agaccgaagt gaccacggtt
     1801 ttctggatcg taaatcgcct gtttcatcga gcgtagcagc atggtttgca gcatttctgc
     1861 atcaggacgg tcggcaaccg actccagcag ttccgcgtag tcacgcggtt ccggcttgtt
     1921 accacccggc agctccagcc ccagctccgc cagcactgaa cggaaagagg taatcgcttc
     1981 ggtgctcggc ttgtcgtgaa tacggaacag tgccggttct ttcgctttct caacgaaacg
     2041 cgccgccgag atattcgcca gaatcatgca ctcttcaatt aatttgtgcg cgtcgttacg
     2101 ctgggtctgt tcgatacgtt caatacggcg ttcagcgttg aaaatgaact tcgcttcttc
     2161 gctctcaaat gagatcccac cgcgttcttc acgggcttta tccagcactt tatagaggtt
     2221 atgcaactct tcgagatgct taaccagcgg ggcgtactgc tcgcgcagat cctgatcgcc
     2281 ctgcagaata tgccagactt tggtgtaggt cagacgcgcg tgagagctca tcaccgcttc
     2341 gtagaatttg tagcccgtca ggcggccttt cgacgaaacc gtcatctcgc acaccataca
     2401 caggcggtct acctgcgggt tgagcgaaca caggccgtta gagagcactt ccggcagcat
     2461 cgggataacc tgcgaaggga agtacaccga cgtgccacgg ttacgcgctt ctctgtccag
     2521 cggcgttggc ggacgcacat agtagctgac gtcggcaatc gcgacccata aacgccagcc
     2581 gccgccgcgt tttttctcgc agtaaactgc atcgtcaaag tcacgggcgt cttcgccatc
     2641 aatggtgacc agcggtaaat cgcgcagatc aacacggccc gcttttgctt cttccggcac
     2701 ttcttctttc agcccggcaa cctgttgctc aacagcctgc ggccagatgt acggaatttc
     2761 atgggtacgc agagcgatat caaccgccat gccggtgccc atattgtcgc ccagcacttc
     2821 gacgatttta cccaccgctt tggtgcggcg agtcggacgc tgagtcagtt cgactacgac
     2881 cacaaagccc atccgcgcgc ccatgatctg atcgggcggg attaagatat cgaagctcag
     2941 acggctatcg tcaggaacca caaagccgac gcccgcttcg gtaaagtagc gaccaacaat
     3001 ctggctggtt tttggcacca gtacgcggac aatacgcgct tcacgacgac ctttacggtc
     3061 agcacccagc ggctgcgcca gcacctgatc gccatgaatg caggttttca tctgctcgct
     3121 ggagagatac aaatcatctt tacgcccttc aacccgcaga aagccgtagc catcacggtg
     3181 gccaataacg gtacctttca ccaggtcgag gcgttccggc agcgcatagc actgacgacg
     3241 agtgaagacc agttgaccat cgcgctccat cgcgcgcagg cggcgacgca ggccttcaag
     3301 ctgctcttcg ccttcaatgt gcagttctac cgccagctca tcacggctgg ccggtttttc
     3361 acgtttggtt aaatgttcga ggataaattc ccgactaggg atgggattcg cgtatttttc
     3421 agcttcgcgt tcctggaaag gatcttgtga catctcggtt cctccgttgt catctctgat
     3481 gaagattttc gtcactccac cagcaataat ttataaagcg gttgattctc ttcaaccaaa
     3541 tcggcaagcg tgtagttatc cagttccgta agaaaacttt gcacggcctt agaaagcgcc
     3601 tgtttcaacc gacaggcagg tgtaatgtgg caaaactcac tgctgcaatt caccagcgat
     3661 aagggctcca gctcgcgcac cacatctcca atacgtatcg cactcgccgg tttacccagg
     3721 cgaatgccgc cattttttcc acgaacagca gtcacgtagc cggcacgact aagttgattg
     3781 attattttga ccatatgatt acgggagacg ccgtagacgt cagtcacttc agaaatactg
     3841 gtcatccgcc cttctggcaa tgacgccatg tagatcagcg cacgtaatcc gtaatcagtg
     3901 aaactcgtta actgcacatc aacctcaaaa gggaaatcgg gaaaaaatac atttatattg
     3961 atgataaacc agccacaagc tgtgtcgcta atttatttca gttcggggaa ggaaaaaagc
     4021 gaggatttaa cactgtgtcg gatagcgtaa tggcttaacc gacacagcaa tgtatcacac
     4081 tgttagcccg gcaggcaaaa tatctgccag gcgtaccaga attacgcgtc gaacggatcg
     4141 cgcagaatca tggtttcagt acgatccgga ccggtagaga tgatatcgat cggcacacca
     4201 gtcagctctt caatacgctt gatgtagttc agcgccgcct gcggcagacc gctacgatct
     4261 ttcacgccga aggtggattc agaccagccc ggcatggttt cgtaaatcgg ctctacacct
     4321 ttccagtcgt cagctgccag cggagtggtc gtcacttcac gaccatccgg catacggtaa
     4381 gccacacaga gtttcacctc tctcaggcca tccagaacgt ccagtttagt cagacagaag
     4441 ccagacaggg agttcagctg taccgcacga cgaacggcaa cggtgtccag ccagccggta
     4501 cgacgacgac gccccgtagt tgcgccgaat tcgttaccct gcttgcagag gaactcgcca
     4561 gtttcatcaa acagttcggt cgggaacgga cctgcaccta cacgagttga gtaagctttg
     4621 aggataccca gaacataatc aacataacgc gggcccaggc cggaaccggt cgccacgcca
     4681 ccagcagtgg tgttggaaga agttacgtac ggataagtac cgtggtcgat atccagcagc
     4741 gtaccctgcg caccttcaaa catgacgaaa tcgccacgct gacgcgcctg gtcgagcagg
     4801 tcagaaacgt caaccaccat agaagtcagg atgtcggcaa ctgccatcgt atcatccaga
     4861 actttctggt aatcaaccgc ttcagctttg tagtagttaa ccaactggaa gttgtgatat
     4921 tccatcactt ctttcagttt ttcagcgaag gtttctttgt cgaaaaggtc gccaacacgc
     4981 agaccgcgac gtgctacttt atcttcataa gcaggcccga taccacgacc ggttgtgccg
     5041 atcgctttcg cgccacgcgc tttctcacgc gcgttatcca gcgcaacgtg ataatcaagg
     5101 atcagcggac atgcttcaga cagcagcaga cgctcacgaa cggggatgcc acggtcttcc
     5161 agttctttca tctctttcat cagcgcggcc ggagacagca caacaccgtt accgatgatg
     5221 ctggttacat tctcgcggag aatacctgat ggaataagat ggagaacggt tttttcaccg
     5281 ttgattacga gagtatggcc tgcgttgtga ccgccctggt agcgtacaac atatttagcc
     5341 cgttcagtca gaagatcgac gatcttacct ttaccttcgt caccccattg ggtgcccagt
     5401 acgacgacgt tgttacccat ttttcaaaat caccgtttgc ttaaaaatgg attctaccat
     5461 cgctttttca gagttacagc actttttgca ctcaaaaatg acctcgatca gtctgttttt
     5521 tgttcagcca atcgttttcc tcaacatgta gtagaccaca acgcccgcaa ccacaagtcc
     5581 accgccaaaa cgacgtaaaa tattatcggg caaattggtc atcgcagaga tcatcttctt
     5641 ccatgccttc gggtaaagca tcggccctaa accttccagt accaaaacca gggcaagcgc
     5701 cagccagatt gtcgaattca ttcattatcc ttatagaaaa agaaaaccac cgacatccct
     5761 gaggatgcgg tggctttatt gacctgtacc gcagtcgtta tattaacgcg ttgcggaagt
     5821 cggcgtcttc atgtagcgga agaaatcgct atccgggctc atgaccatca cgtcctgatt
     5881 gccagagaag ctgttctcat aagcacgcag gctacggatg aatgcgtaga agtccggatc
     5941 tttactgaat gcatcagcaa acagtttggc tgcttcggca tcgccttcac cacgcatgat
     6001 gcggccctga cgctcagctt ctgccagcgt tctggtcact tcatagtcgg cagtcgcgcg
     6061 cagtttttcc gcttcttcct gaccttgtga acggtgacga cgcgctaccg cttcacgctc
     6121 ggcgcgcata cggttgtaga tcgcttcaga cacttcggtc ggcaggttga tctgcttgat
     6181 acgcacatcg acaacttcaa tacccagcgc cgccatactg ttcgggttga tgaccggaac
     6241 tttgcccttc gtctcagccg ttacgcgctc tgccgcttcg gcaatggcgt tatctgccgc
     6301 cggggtagta acttcatctt ctgtacccgc agaaccggag ttcagcgcgt cacgtacttc
     6361 gagggtcaga cgaccacggg aatcggtgac gatatctttc acgtccaggc gaccaatttc
     6421 agaacgcaga cggtcagaga acttacgttt caacagcact tccgcttgcg aaatgtcgcc
     6481 accacccgtt gccaggtagt aacggctgaa atcgctgatg cgccatttga tgtaagagtc
     6541 gacgatcagg tctttcttct ctttggtcac aaagcggtcg gcctggttgt ccatggtctg
     6601 aatacgtgcg tcgagcattt tcaccgtttc aatgaacggt atcttgaaat gcagacccgg
     6661 ctcataaacc agaggtttgt tgtcatcgtc acgcagtacc ttaccaaaac gcagcgtaat
     6721 accgcgctca ccttctttga cgacaaagac agacatgtaa agcactacca gcacgatgat
     6781 gataatcgcg ataactgact tacgcatcgt tattccccct gacgctggta gtcgttacgc
     6841 tgcgcgttgg cgcggcgttg gtccataata tcgccctgac tggtggacga cgtgttgctt
     6901 gctccactgg ttgtggagga agaggctggc ggcagacgca gcagattgct ggtaccgtta
     6961 tcgctcttcg ccgcaggggc gttaccgcct ttcagcatct ggtctaacgg cagaaccatc
     7021 aggttgccac ctttatcgtt aaccagcact ttgcgggtgt tacccaacac tttttccatc
     7081 gtctcgatat acagacgctc gcgagtaatt tccggcgcgg ctttatattc cggcagaagt
     7141 ttagcaaagc gcgccacttc accctgagct tccaggatgg tctgggcctt gtacgcacgc
     7201 gcctcttcga ggatacgttg cgcctgaccg ttcgcacgcg gctgaacttc gttggtatac
     7261 gcttctgctt cacgaatgta ttgctgttcg ttttcacgcg cggcaatcgc atcgtcaaac
     7321 gccgctttta cttcttccgg cggacgagca gcctggaagt tgacgtccag cagcgtgata
     7381 cccatgtcat acggacggat agtctcttcc agttcgcgct gagtatcgct acgaatcacg
     7441 gtacgacctt ccgtcagaat gcggtccatg gtgtatttac cgataacccc gcgcagggcg
     7501 ctgtcggtag cctgacgcag gctgtcatcc gggctggtca cgctatacag atatttttcc
     7561 ggattggtga cgcggtactg cacgttcatc tcaacgcgca ctacgttctc gtccgacgtc
     7621 agcatcacac cagaagcggc cagttcacgc acggcttcca cgttcaccgg tttgacttcg
     7681 tcgataaacg tcggtttcca gttcagaccc ggctcaacca gatggctgaa tttaccaaag
     7741 cgtgttacca cgccgcgttc ggcttcttta atggtataga aaccactggc cgcccagata
     7801 atgacaatcg ctgccgctgc gatggtaacg acacgaccgc caagctgcgg gcgcgggcct
     7861 tgcgatgaac tgccaccgcc agatccggtg cctttaccgc cgcccagacc accgagcttt
     7921 ttgctcagtt tgcggaagat atcatctaaa tcaggtggcc cttgatcgcg accgcctttg
     7981 tttccatttc cctcagagtt gccgccaggt ttgctgcttc cccacgggtc gcggtcttgt
     8041 ccgttattac cgggctgatt ccacgccatg tttgtgctcc atatttgtta tgcggtgatc
     8101 cctgttgtct ttcgacgcca gaggatatga ctccacgctt cagacgctac gccgttagat
     8161 caggtaatcg atcaacgccg gttcttgttt acagaggcga cgccagtcaa cgatcggcat
     8221 acgaacttgc agacttacgc tgccgtcctc ctccatccac tctttttcta ttgcctgaag
     8281 ctgataaaaa cgacttctca gacgcccttc ctgcggtggc agacgcaatg tatgctgcgc
     8341 cacctcgccg gaaagccgct ccgtcaaagc ctgaaaaagc tgtggtatcc ccgctccggt
     8401 ctgtgcggaa agccagacac ggatcggttt gttctcttcg tcccgatcaa tacgcggttc
     8461 gaaatcttcc agcatatcga tcttgttcat caccagcagg gttgggatct cgtgagcgtc
     8521 gatctcttca agaaccgtat tcaccgcttc gatgttttct tgtacacgca catccgccgc
     8581 atcaatgacg tgcagcagta atgtggcttg ccgcgtctct tgtaacgtgg ctttaaatgc
     8641 cgccaccaga tcgtgcggca ggtggcgaat aaaccctacg gtatctgcaa gtacggtttc
     8701 accgacatct gcaacgtcaa tacgccgcaa cgtcgggtcg agggtggcaa acaactggtc
     8761 tgccgcgtag acccgcgctt cggtgatgcg attgaaaagg gtagatttac cggcgttggt
     8821 atatcccacc agcgaaacag taggaacgtc ggctttgata cgcgattgcc gcccctgctc
     8881 acgctgcttt tcaactcttt ccaggcgtga ctgtatctgc acgatgcgat tacgcaacaa
     8941 acgacggtcg gtttcgagct gggtttcacc cggaccacgc aaacctatcc cgcctttctg
     9001 tctttcaagg tgggtccagc cacgcaccag gcgcgtagcc agatggcgca gctgcgccag
     9061 ctcaacctgc aacttaccct catgggtacg cgcacgttgg gcgaaaatat ctaaaataag
     9121 gccggtgcgg tcgataacac gacactcgca caaacgctcc aggttacgct cttgcgccgg
     9181 gctcagggca tggtcaaaaa gaacgaccga agcacccgtc gctttgacag cttccgcaat
     9241 ttcaactgct ttaccttcac ctacaaaata ctttgggtgc ggcgctttac ggctaccggt
     9301 aatcacctgc aatgcttcga caccggcgga agagaccaga gattcaaact cctggaggtc
     9361 ttccatatct ttgtcttgcg taaaatagat gtgtaccagt accgcctgct caccagcatc
     9421 ataacggtca aacaagcgta taaccctcta aatagatcag cggggaacgc aggatcgctg
     9481 gctccccgtg taaaaaaaac agcccgaaac cttattcggt ttcttcgctg tcctgttgcg
     9541 cggaagtatt ctgcgcgctg ctaccatgat ggtagttact gctggtaccg ccaccggcgt
     9601 tgttactgtg atgagaaacc gggcgagacg ggacaacagt agaaatcgcg tgcttgtaaa
     9661 ccatctggct gaccgtgttt ttcaacagga tcacgaactg atcaaaagac tcgatttgcc
     9721 cttgcagctt aataccattc accaaataaa tagaaactgg aacacgttcc cgacgcagtg
     9781 cgttcaggaa cggatcttgt aaagattgcc ccttagccat tctctctttt ccttatatgc
     9841 ttatttgtac tttgaacctt tcgattctga aaaaattgcg cacgatacgt ctcaattgta
     9901 cacattcagc ctgcgatagc accaacaacc tgtaatactt cgtcacgcgc ctgttctggt
     9961 ttttcactgt caagccagtg aaccccttcc caaccacgca gccaggttat ctgccgcttc
    10021 gccaactgtc tcgtggcgca aacacctcga taaaccattt catcgtatga gatttcgcct
    10081 tcaaggtaag accacatctg gcgataaccc acgcaacgaa tggaaggcaa gtccgtatgc
    10141 aaatctcctc gggcaaaaag cgcccggact tctgcttcaa aacctgaagc caacatctga
    10201 tgaaaacgct gctcaatgcg ttgatggagc agttcacggc tcgccggggc gatggcgaac
    10261 tgatgcacct gatacggtag agcgtctcct gacgtttgcg tcagttccgt taaagtttta
    10321 cccgaaatga aaaaaacttc cagtgcccgg gaaagccttt gtggatcatt tggatgaatc
    10381 cttgctgccg caaccggatc tacctcctga agttgacgat gcaatgactc ccaaccttgc
    10441 tctgccgcct gttgctcaat tctggcccgc acttccgggt ctgccgacgg tagcggcgac
    10501 aacccttcca gcaatgcctt gaaatacaac atcgtaccgc ccactaacag tgggatccgc
    10561 cccgccgcgg tgatatcggc catttccgcc agcgcatcgc ggcgaaaatc agcagccgag
    10621 taagcctgcg acggatcgcg aatatccagc aatcggtgcg gcgcggcgag taactcttca
    10681 gcgttcggct tcgccgtccc gatatccatc cctttgtaaa taagggcaga atcaacgctt
    10741 atcaactcta ctggtaaaat tttacgcagc tcaatggcta acgccgtttt accggaggcc
    10801 gtcggcccca tcaaaaaaat cgccttaggc aggctcgcct tactgatatc actcatcttt
    10861 cagggctttt atcgccggat gtaaatcaac agattgtaac agaccacccg gcggcgtttt
    10921 cacaagttgc ggacataact gttccacgtc cgccagcagg gttatggcct gtgccattga
    10981 ccactgcgca tgttcgctca tcagatttcg tgcaatccac tgcgcaatat tgccaggttc
    11041 gaatacggac tgcttcgcca ggtagcctat cagttcagga atcaagattt gtaaattttg
    11101 ttggcgtaag ggtaaaggca cggccctgat ggtcacatgc tgtgcatctg actggaaatc
    11161 aatacccaat tccgccaggg cagactgcgc tttttctaat gccgattttt cttcggcaga
    11221 aacttttagc cgcaacggaa tcagcagcgg ctgggcgcaa acgggcgctt cacccggcgt
    11281 caattgtgcc tgacgtagcc aacgttctgc cactggcaag gataaaagtg aaatgttgcc
    11341 atcgcgctcc agcaacgcac agtcggaatg gacgatagtc agtacccgac caaaactctg
    11401 actgttcgcc gcaagtgcag gttcctgcgg ttccggcgct tttaattttt gcatcggcgc
    11461 gggcgtttgc aaaagctggc gatacacttc accttgctgt ttctggtagc ctggctgcgc
    11521 attcggccag ggggcagccg gacgactgcc tgatgctggc gcaggagtgt agcgcggagc
    11581 taccggctca cgagctgccg gttctgcaaa gtgattgcgc cccgccgcca cgcggttttc
    11641 cgggatggca cgcggtgcgg gttgtggttc atcgtccagc ggtagcggcg tttccagttg
    11701 ctgctgtagc acgctcagca cgccctgata gataaagtca tgcaccagac gcgactgatg
    11761 gaaacgcact tcgtgtttgg cggggtgtac gttgacgtcc acctgatgcg ggtcgatctc
    11821 cagatacaac acaaacgccg gttgttgatc ggcccccagt ttgtcttcgc aggcctggcg
    11881 gatcgcatga ttgatcaggc gatcgcgcat catgcgacca ttcacgtagc aatactgaat
    11941 ttccgccagt gcgggcgtag tgtgatttgg atcggccacc cagccgcgca gggtgagatc
    12001 gccgtgttgc cattcaatcg ccagcgcttg ttcgagaaaa gcggtgccgc aaatcgcgcc
    12061 taagcgccgt tctttttgcc cgccttccgg cactgcgcgg tactgacgca caattttacc
    12121 gttatgcgac aggttgatcg tgacgtcgaa acgcgccagc gcaatgcggc ggatgatctc
    12181 atcaatgtgg ttaaattcgg ttttctcggt gcgcaggaat ttgcgccgcg ccggggtgtt
    12241 gtagaacaga tccagcacct ccagcgtcgt ccccacagga tgcgccgccg gttttaccgt
    12301 cacgttcata tcgcgccctt cggcataggc ctgccaggct tcctgctgtt ctgcggtgcg
    12361 tgaagtgagc gtcaggcggg aaaccgaact gatactcgcc agcgcctcac cgcgaaagcc
    12421 caggctgata atggcttcga gatcgtccag agaggcgatt ttactggtgg catgacgcgc
    12481 cagcgccagc gccagctcgt cttttttgat accgcagccg ttatcacgaa tgcggataag
    12541 tttcgcccca ccgcgttcga tatcaatatc gatacgtgtc gcacctgcat cgaggctgtt
    12601 ttccaccagt tctttgacta ccgacgcagg tcgctcgacc acctcacctg cggcaatctg
    12661 gttcgccagt tgtggcggta agacctgaat tggcatcaat cgtccttagt ttggcagcgt
    12721 gcgatctggc gtcgtcaccg tactggccgt ttgtgccgtt gccccctgcg gcgcagattg
    12781 catcggatgc gcaaggaaat aattgcgcag gcctttgtaa atggcttctg ccagctgttg
    12841 ttggtaatcg tcgctcgcca gcaaacgttc ttcgctgttg ttgctgataa aaccggtttc
    12901 gaccagtact gatgggatat ccggcgaacg cagaacgccg agactcgcgt gttctggtcg
    12961 gcgtttatgt atttcgccaa tgcgttgcaa ctgactgatc atactggtcg ctacatcata
    13021 ccctacccgt tgggaatgac cgaactgtaa atccagcacc gcctggctta aataggggtc
    13081 agactgactg ttcgccagca catcacccgc cccacccagc agctccgact gtttctcgtg
    13141 ctgctccagc cagctggcca tttcgctgtt ggcgcgacgg ttagagagca cccatacgga
    13201 agcgccagtc gcactgcggt tcggtgcggc atcagcgtga atcgacacga ggaaattggc
    13261 gttttgctta cgtgccacat cactgcgccc catcaccgag ataaagtaat ccccgtcacg
    13321 ggttaaaacg cccttaaaca tcggatcgtc attgagcaaa gtacgcaatt tacgcgcgat
    13381 ggcgatggtg acatttttct cccgcgtacc accggggccg atagcgccag ggtcctgacc
    13441 gccgtgtccg gcatcaatag cgatgataat tttatcgcca gtgttagccg tcgcgcgcgc
    13501 tgccggacgc gttaccgtat tactgctgat aacacccgta gtgcggttac tttccgtttt
    13561 aaacggattg cgcgccggtt cgctgacgcg cggtgcgaca accgcaggcg tttcaacgcg
    13621 tttcgcaacc acgggcggcg gaggaggagg tggcggcgca tcggcgttaa tcgtaaagac
    13681 gacagtgtaa ttgctgccat tctgccgctt caccgcttcg gttttaccgt tttcggtaag
    13741 atcgaccacc agccgtagcg tttgtgcatc tttaggcgtt ccagagcgaa tcgccttcac
    13801 cagattattg ccgctgaaca acaacggcag tccctgaatc acgcccgttt gtttgatatc
    13861 gagcgccacg gtgcgtttgc tttgatggct aaacgcataa tcaggatcgc caataaaact
    13921 caacgttatc cgcgcctgtt gattaccgtt agaaacctga atatcagaga gcgtcgcggc
    13981 acccaccggc gtgcacagca gcagcagcgt cgctaccaac caatttctga tgcgatacat
    14041 catcccgcca cctttcaaag gttaaccggc taaacgcgcc agcaacaatt cacccgcaga
    14101 ggaaaccgca ctcacgcgcg cctcacggcc ttgtgcctga taatcaatgt gtatttcgac
    14161 atccgggtca ggaagaacac ctgtaccttg ttgtggccac tccaccaggc agatggcatc
    14221 gttggcaaaa taatcgcgaa tccccataaa ctccagctcc tcgggatcgg caaggcggta
    14281 caaatcaaag tgataaacca ttaaattgtc gagcgtatag ggttcgacca gcgtataagt
    14341 ggggcttttg acattaccct gatgacccag agcttgtaaa aagccccggc taaaggtggt
    14401 tttacctgcg cctaaatcgc catacagata gattacggtt gcgccatcgc aggctttcgc
    14461 tacccgctcg cccaggtcta atgttgcctg ctcatcaggg agcggaatta ctcgattcat
    14521 catggttttt atcagtcact tccgggttaa caatacgctg tagcgtggaa aagagatcgg
    14581 ttgccagcat cccgcgcgtt ccaaaacgcg ccgccagtac gtcagctgca gcaccgtgcg
    14641 cgacacagcc cgcacaggcg gcatcatacg gcgacagttt ttgcccaagc aatgcgccaa
    14701 taataccaga gagcacatcg cccatgccgc cgctcgccat gcctgcattt ccggcatcaa
    14761 taatgcctaa agcgtcagga tgggcggcga ccacggttcc ggcacctttc agcaccgcta
    14821 cgccgccata acgttgtacc agacgtttgg cgcaatgtaa gcggtcactt tcaatttcag
    14881 cgacggaaca gcctaacaac cgtgcggcct cgccaggatg cggcgtgatc acgcgattgt
    14941 gacgcttatc gggattgatt gccagcaggt tcaatgcatc ggcatcccac aacatcggtt
    15001 tgcgaaaatt ctcaactttt tgcagtgctt ttttccccca ctcttgctgg cccaggccgg
    15061 gaccaatcac caccacatcg gcccattcca ggctttcggt aagagagtcc atcgtcagtt
    15121 catgcaccat caattccggt cgtgcagtca gcagcggcgc aatgttttca ctgcgggtca
    15181 gtactcggac taaaccagca ccagcacgca gcgccgcttc ccccgtcata cgaatagccc
    15241 ccgccgtgcc gtgatcgcca ccgataatta ccagccgccc gtgatcgcct ttatgcgaag
    15301 tcgggcgacg cggttttagc cagtgagaaa gttgttctgc tgaaaaccgc tgaattttcg
    15361 tctcctgacc tgccagccaa ctatccagcc ccagtgagtc aaaatgcagt tgtccggtaa
    15421 catcccgcgc ttttccagtg agcaagcctg gtttcagcgc aataaaagtg atggtgtgat
    15481 cggcgttgat caccgcgcct ggcgtagcgc cagtttcagc cagcaggccg gaagggatat
    15541 caaccgccac aatcggcgca ggatgggaat tagcgtggtc gattaactgg ctaatggatt
    15601 cgcggggcgc ttgccgcaaa ccggtaccga gcagcgcatc aacaatcaga tctaccgatt
    15661 cgggccagac aatattcgaa gcatggatct cgccacccgc gtttaaccat gcttcgcgtg
    15721 ccagcgcggc ctcttccggc aacggtttgt cgctctcctg ggccaacaac gtgacctcaa
    15781 tgccgaccgc tttggccagt cgcgcgacca cgtagccatc gccgccgtta ttaccatgac
    15841 cgcacagcac cagccagtgg cgggcgtcag gatacgccga acgacacacc tggaatgcgg
    15901 cctcgccagc gcgaagcatc agctcataga gtgtgagccc cagcacatct gccgcctcgc
    15961 gttctccgcg gcggatatcg tcggcgtacc agacggtgtg tggtatactt acggggtttt
    16021 tcttcattgt atggtccgtc atgtcagagc ccctcgatct caatcagtta gcgcaaaaaa
    16081 ttaaacagtg ggggctggaa ctgggctttc agcaggtagg tattaccgat accgatctca
    16141 gcgagtccga gcccaaactg caagcatggc tggacaaaca ataccacggc gaaatggact
    16201 ggatggcacg tcacggtatg ctgcgcgctc gccctcatga gttattgccc ggtacgctgc
    16261 gcgtgatcag cgtgcggatg aattaccttc ctgctaacgc cgcatttgcc agcacgctga
    16321 aaaaccccaa actcggctat gttagccgtt atgcgctggg ccgtgactat cacaaacttc
    16381 tgcgcaaccg actcaaaaag ctgggcgaga tgattcagca acattgtgtt tcgctgaatt
    16441 ttagaccgtt tgtcgattct gcgcctattc tcgagcgccc gttagctgaa aaagctgggc
    16501 tcggctggac aggtaagcac tcacttatcc tcaatcgcga ggccggttcg ttcttctttt
    16561 taggcgaatt gctggtcgat attccgctgc ccgtggatca accagtcgag gaaggatgcg
    16621 gcaaatgcgt ggcctgtatg acgatttgcc cgaccggtgc catcgtcgag ccatataccg
    16681 tcgatgctcg ccgctgtatc tcttatctca ccatcgaact tgaaggggcg atcccggaag
    16741 agttgcgacc gttaatggga aaccgtattt acggttgcga tgactgccag cttatctgcc
    16801 cgtggaatcg ctattcgcaa ctcactacag aagacgattt cagcccgcgt aagccgctac
    16861 acgcaccgga actcattgag ttattcgcct ggagcgaaga gaagttttta aaagtcacgg
    16921 aaggatcggc gattcgccgt attggtcacc tgcgttggct gcgtaatatc gccgtagcat
    16981 taggcaatgc cccttgggat gaaacgattt tgacagcgct ggaaagtcgt aaaggtgagc
    17041 acccacttct cgatgagcac atagcgtggg cgattgcgca gcaaatagag agacgaaatg
    17101 cgtgcatagt cgaagtgcaa ttgccgaaaa aacagcgtct ggttcgggtg attgaaaaag
    17161 ggttaccgcg tgacgcctga ttcatccaca gcttgtgaat aaaaataaaa acgcattgca
    17221 attcaagacg aataaaatcg tcaagtgatc gactcgacaa aacggaatct taatttttaa
    17281 cttatctatc aataggttaa aaaaatacta ttcaccgtgc gaagtttctt tgaaattaag
    17341 attacagcct gaggctgtgg ataactctgt ttacaagagt ttgtcagaga caacaaaaac
    17401 cagcaataac gcatcgcgtc gctgtggata ttttattgag agaaga
//
LOCUS       DAPGWB010000095        16913 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.096, whole genome shotgun sequence.
ACCESSION   DAPGWB010000095 DAPGWB010000000
VERSION     DAPGWB010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 16913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16913
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.096"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            127..2802
                     /gene="adhE"
                     /locus_tag="RHX79_003010"
                     /gene_synonym="adhC"
     CDS             127..2802
                     /gene="adhE"
                     /locus_tag="RHX79_003010"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HDV2198158.1"
                     /translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAAD
                     ARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAE
                     PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAA
                     GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP
                     VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQG
                     KELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAH
                     EKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTA
                     RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN
                     MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV
                     ETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF
                     EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLAD
                     YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLL
                     KEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA
                     NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL
                     LAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQ
                     ILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA"
     gene            complement(3104..3721)
                     /gene="tdk"
                     /locus_tag="RHX79_003011"
     CDS             complement(3104..3721)
                     /gene="tdk"
                     /locus_tag="RHX79_003011"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HDV2198159.1"
                     /translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF
                     GAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSE
                     VVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQA
                     GRPYNEGEQVVIGGNERYVSVCRKHYKEALQVGSLTAIQERHRHD"
     gene            4326..4739
                     /gene="hns"
                     /locus_tag="RHX79_003012"
     CDS             4326..4739
                     /gene="hns"
                     /locus_tag="RHX79_003012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator H-NS"
                     /protein_id="HDV2198160.1"
                     /translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE
                     SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDE
                     NGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ"
     gene            complement(4883..5791)
                     /gene="galU"
                     /locus_tag="RHX79_003013"
     CDS             complement(4883..5791)
                     /gene="galU"
                     /locus_tag="RHX79_003013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDV2198161.1"
                     /translation="MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY
                     VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV
                     TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFD
                     ETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRY
                     VLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF
                     VEYGIRHNTLGTEFKAWLEEEMGIKK"
     gene            complement(5993..7006)
                     /gene="rssB"
                     /locus_tag="RHX79_003014"
     CDS             complement(5993..7006)
                     /gene="rssB"
                     /locus_tag="RHX79_003014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RssB"
                     /protein_id="HDV2198162.1"
                     /translation="MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTVLAADGVDAL
                     ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGV
                     EDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQEL
                     QPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALL
                     LRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLI
                     LVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLML
                     SAE"
     gene            complement(7098..8003)
                     /gene="rssA"
                     /locus_tag="RHX79_003015"
     CDS             complement(7098..8003)
                     /gene="rssA"
                     /locus_tag="RHX79_003015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase RssA"
                     /protein_id="HDV2198163.1"
                     /translation="MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGS
                     LVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEI
                     ENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
                     PIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLG
                     SITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAH
                     AAIAAGQLAVEKKMDELLPLVRTNI"
     gene            8116..8574
                     /locus_tag="RHX79_003016"
     CDS             8116..8574
                     /locus_tag="RHX79_003016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HDV2198164.1"
                     /translation="MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQ
                     DADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTE
                     GGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ"
     gene            8624..9466
                     /gene="purU"
                     /locus_tag="RHX79_003017"
     CDS             8624..9466
                     /gene="purU"
                     /locus_tag="RHX79_003017"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDV2198165.1"
                     /translation="MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHR
                     TGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLL
                     MKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQ
                     PDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAH
                     YVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNR
                     TIIL"
     gene            9626..9710
                     /locus_tag="RHX79_003018"
     tRNA            9626..9710
                     /locus_tag="RHX79_003018"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9660..9662,aa:Tyr,seq:gta)
     gene            9758..9889
                     /locus_tag="RHX79_003019"
     ncRNA           9758..9889
                     /ncRNA_class="other"
                     /locus_tag="RHX79_003019"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(10073..10750)
                     /gene="narI"
                     /locus_tag="RHX79_003020"
     CDS             complement(10073..10750)
                     /gene="narI"
                     /locus_tag="RHX79_003020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HDV2198166.1"
                     /translation="MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLD
                     RKGMNLASNLFHIGILGIFVGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCL
                     IGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLV
                     GWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKY
                     QLVRARH"
     gene            complement(10750..11460)
                     /gene="narJ"
                     /locus_tag="RHX79_003021"
     CDS             complement(10750..11460)
                     /gene="narJ"
                     /locus_tag="RHX79_003021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HDV2198167.1"
                     /translation="MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLSKEDAHALG
                     IFLRDLTAMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHG
                     LQLNSRELPDHLPLYLEYLSQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVMFDL
                     LLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRR
                     FAGAVAPQYLNITTGGQH"
     gene            complement(11457..12995)
                     /gene="narH"
                     /locus_tag="RHX79_003022"
     CDS             complement(11457..12995)
                     /gene="narH"
                     /locus_tag="RHX79_003022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HDV2198168.1"
                     /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNV
                     ETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYE
                     PFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKN
                     FDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCR
                     GWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYD
                     ADAIERAASTENEKDLYQRQLEVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMA
                     MEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLAN
                     LLTAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIA
                     NYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKT
                     EPHP"
     gene            complement(12992..16735)
                     /locus_tag="RHX79_003023"
     CDS             complement(12992..16735)
                     /locus_tag="RHX79_003023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HDV2198169.1"
                     /translation="MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDK
                     IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY
                     LYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVR
                     SSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY
                     DWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
                     KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRY
                     TDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIG
                     FRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELEN
                     VLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWA
                     EQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCG
                     CVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETV
                     TAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVD
                     YTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQ
                     GKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDM
                     NTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHD
                     SAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGG
                     KGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAW
                     AALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNV
                     HELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNPEKALN
                     FLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALT
                     ARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAH
                     LAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK"
BASE COUNT         4206 a         4450 c         4074 g         4183 t
ORIGIN      
        1 cagtgagtgt gagcgcgagt aagcttttga ttttcatagg ttaagcaaat catcaccgca
       61 ctgactatac tctcgtattc gagcagatga tttactaaaa aagtttaaca ttatcaggag
      121 agcattatgg ctgttactaa tgtcgctgaa cttaacgcac tcgtagagcg tgtaaaaaaa
      181 gcccagcgtg aatatgccag tttcactcaa gagcaagtag acaaaatctt ccgcgccgcc
      241 gctctggctg ctgcagatgc tcgaatccca ctcgcgaaaa tggccgttgc cgaatccggc
      301 atgggtatcg tcgaagataa agtgatcaaa aaccactttg cttctgaata tatctacaac
      361 gcctataaag atgaaaaaac ctgtggtgtt ctgtctgaag acgacacttt tggtaccatc
      421 actatcgctg aaccaatcgg tattatttgc ggtatcgttc cgaccactaa cccgacttca
      481 actgctatct tcaaatcgct gatcagtctg aagacccgta acgccattat cttctccccg
      541 cacccgcgtg caaaagatgc caccaacaaa gcggctgata tcgttctgca ggctgctatc
      601 gctgccggtg ctccgaaaga tctgatcggc tggatcgatc aaccttctgt tgaactgtct
      661 aacgcactga tgcaccaccc agacatcaac ctgatcctcg cgactggtgg tccgggcatg
      721 gttaaagccg catacagctc cggtaaacca gctatcggtg taggcgcggg caacactcca
      781 gttgttatcg atgaaactgc tgatatcaaa cgtgcagttg catctgtact gatgtccaaa
      841 accttcgaca acggcgtaat ctgtgcttct gaacagtctg ttgttgttgt tgactctgtt
      901 tatgacgctg tacgtgaacg ttttgcaacc cacggcggct atctgttgca gggtaaagag
      961 ctgaaagctg ttcaggatgt tatcctgaaa aacggtgcgc tgaacgcggc tatcgttggt
     1021 cagccagcct ataaaattgc tgaactggca ggcttctctg taccagaaaa caccaagatt
     1081 ctgatcggtg aagtgaccgt tgttgatgaa agcgaaccgt tcgcacatga aaaactgtcc
     1141 ccgactctgg caatgtaccg cgctaaagat ttcgaagacg cggtagaaaa agcagagaaa
     1201 ctggttgcta tgggcggtat cggtcatacc tcttgcctgt acactgacca ggataaccaa
     1261 ccggctcgcg tttcttactt cggtcagaaa atgaaaacgg ctcgtatcct gattaacacc
     1321 ccagcgtctc agggtggtat cggtgacctg tataacttca aactcgcacc ttccctgact
     1381 ctgggttgtg gttcttgggg tggtaactcc atctctgaaa acgttggtcc gaaacacctg
     1441 atcaacaaga aaaccgttgc taagcgagct gaaaacatgt tgtggcacaa acttccgaaa
     1501 tctatctact tccgccgtgg ctccctgcca atcgcgctgg atgaagtgat tactgatggc
     1561 cacaaacgtg cgctcatcgt gactgaccgc ttcctgttca acaatggtta tgctgatcag
     1621 atcacttccg tactgaaagc agcaggcgtt gaaactgaag ttttcttcga agtagaagcg
     1681 gacccgaccc tgagcatcgt tcgtaaaggt gcagaactgg caaactcctt caaaccagac
     1741 gtgattatcg cgctgggtgg tggttccccg atggacgccg cgaagatcat gtgggttatg
     1801 tacgaacatc cggaaactca cttcgaagag ctggcgctgc gctttatgga tatccgtaaa
     1861 cgtatctaca agttcccgaa aatgggcgtg aaagcgaaaa tgatcgctgt caccaccact
     1921 tctggtacag gttctgaagt cactccgttt gcggttgtaa ctgacgacgc tactggtcag
     1981 aaatatccgc tggcagacta tgcgctgact ccggatatgg cgattgtcga cgccaacctg
     2041 gttatggaca tgccgaagtc cctgtgtgct ttcggtggtc tggacgcagt aactcacgcc
     2101 atggaagctt atgtttctgt actggcatct gagttctctg atggtcaggc tctgcaggca
     2161 ctgaaactgc tgaaagaata tctgccagcg tcctaccacg aagggtctaa aaatccggta
     2221 gcgcgtgaac gtgttcacag tgcagcgact atcgcgggta tcgcgtttgc gaacgccttc
     2281 ctgggtgtat gtcactcaat ggcgcacaaa ctgggttccc agttccatat tccgcacggt
     2341 ctggcaaacg ccctgctgat ttgtaacgtt attcgctaca atgcgaacga caacccgacc
     2401 aagcagactg cattcagcca gtatgaccgt ccgcaggctc gccgtcgtta tgctgaaatt
     2461 gccgaccact tgggtctgag cgcaccgggc gaccgtactg ctgctaagat cgagaaactg
     2521 ctggcatggc tggaaacgct gaaagctgaa ctgggtattc cgaaatctat ccgtgaagct
     2581 ggcgttcagg aagcagactt cctggcgaac gtggataaac tgtctgaaga tgcgttcgat
     2641 gaccagtgca ccggcgctaa cccgcgttac ccgctgatct ccgagctgaa acagatcctg
     2701 ctggatacct actacggtcg tgattatgta gaaggtgaaa ctgcagcgaa aaaagaagcc
     2761 gctccggcta aagctgagaa aaaagcgaaa aaatccgctt aatcagtagc gctgtctggc
     2821 aatataaacg gccccttctg gggccgtttt tttgtttacc caaagcaact tttccataaa
     2881 ccgacagcat tagccttcat catatttgcg acgatgtata acgcctaaac acagggatat
     2941 tgtactttac aggtcacaag tcaacgtcga tgcttaagag ccctgtgagg cgtatagcgg
     3001 cgttaaaaaa ctgccgagaa gggtatatag cccggaagaa gtgcgtaaaa cgaactgaca
     3061 ggataaaagt gccctgctca ccctgtcagt aaagaaattc ttattaatcg tggcgatgcc
     3121 tttcctgaat agccgttaat gagccgactt gtaacgcctc tttatagtgt ttacggcata
     3181 cagaaacgta tcgttcatta ccaccaatta ccacctgctc accttcgtta taaggtctgc
     3241 ctgcttgatc aagacgcagc accatgcttg ctttacggcc acaaaaacag atggttttta
     3301 attcaaccag tttgtcggac catgccagta agtattggct gccaataaat aattcacctc
     3361 gaaaatcggt acgtaaacca taacaaagta cgggtatatc gagttgatcg acaacctccg
     3421 ataattcata tacttgttgt ctggttaaaa actggcattc atcaaccagt acgcaatgaa
     3481 ttgcctgctg ttcatgttcc gcacgaatct catcaaataa tgatgaattt tggttaaata
     3541 attttgcagg cgatgacaaa cctatacgcg aactgacttt cccggcacca aagcgatcat
     3601 caatttctgc cgtatatacg acagtgcgca tgccgcgttc ctggtaattg tatgaagatt
     3661 gcaacaatgc tgtagactta cccgcattca ttgcggaata gtagaaatat agctgtgcca
     3721 tcagccacag gccctcaatg atatgaaata aagttggctg gagtttatca taattcgtca
     3781 gtttttcagc tcaacagtat gcacagaagt gggtatatgc gttctccctt acgaagcctt
     3841 gcataatcct tctgagctat cattacaact gcctcgcttg ttataagcgg gtaaatgact
     3901 gctggtaact attcacaatc tttaacctgt tgcgcaagta atagccctct gttgacctcc
     3961 aggagatagt gcaatactaa gtccatgctc ttattgcgac tgttctactt ttcatcattc
     4021 gcttaatagg gaattctcgt aaacacaact aatacagaag actgaaaggt cgtcagccta
     4081 cgataatctc cccataaaat gtgacatgaa tcaggaagtt ttaacctcac gtgctgcgaa
     4141 atcatcggtg taaatagggc tatatgccgc gtcttttctg gctaatttta tgaaaagata
     4201 tttattggcg gcacaaaata aagaacaatt ttgaattcct tacattcctg gctattgcac
     4261 aactgaattt aaggctctat tattacctca acaaaccacc ccaatataag tttgagatta
     4321 ctacaatgag cgaagcactt aaaattctga acaacatccg tactcttcgt gcgcaggcaa
     4381 gagaatgtac acttgaaacg ctggaagaaa tgctggaaaa attagaagtt gttgttaacg
     4441 aacgtcgcga agaagaaagc gcggctgctg ctgaagttga agagcgcact cgtaaactgc
     4501 agcaatatcg cgaaatgctg atcgctgacg gtattgaccc gaacgaactg ctgaatagcc
     4561 ttgctgccgt taaatctggc accaaagcta aacgtgctca gcgtccggca aaatatagct
     4621 acgttgacga aaacggcgaa actaaaacct ggactggcca aggccgtact ccagctgtaa
     4681 tcaaaaaagc aatggatgag caaggtaaat ccctcgacga tttcctgatc aagcaataat
     4741 cttttgtaga ttgcacttgc ttaaaatccc gccagcggcg ggatttttta ttgtccggtt
     4801 taagacaatt taataagaat aagctataaa aaaacggcgt cgattgctca acgccgtttc
     4861 gtggataaca ccgatacgga tgttacttct taatgcccat ctcttcttca agccaggctt
     4921 taaattccgt gccaagggtg ttatgacgaa taccgtattc aacgaaggcc tgcatgtaac
     4981 ctaatttatt accgcagtca tggctcttcc ctttcatatg ataggcttcc accgtttctt
     5041 tttcgatcag catatcaatt gcgtcggtga gctgaatttc atcaccagct cccggagggg
     5101 tttttgccag caacggccaa atatccgcgc taagtacgta acgacccaca atagcgagat
     5161 tagacggcgc aacatccgct ttcggttttt ctaccacacc aaccatcggt acgctttcac
     5221 ccggcgctaa ttcaacgcct ttgcaatcca caacgccata tgcggtcaca tcagcaaccg
     5281 gttcaaccat gatctggcta tgacccgttt catcaaagcg gcggatcatc tctgccaggt
     5341 tatcctgtga caaatcggat tcatattcat ccagaataac atcaggcaaa ataacagcta
     5401 ccggttcatc acccactacc gggtgagcac acaataccgc gtgtcccagg cctttcgcca
     5461 gaccctgacg aacttgcata atagttacgt gcggcggaca aatagactgc acttcatcaa
     5521 gcagttgacg ttttacacgt ttttccagca ttgcttccag ttcaaaactg gtatcaaagt
     5581 ggttttcaat agagttttta gatgagtgtg taaccagcac aatttcagta atgccagccg
     5641 caatacattc attcacgacg tattgaatta atggcttatc gacaagtggc agcatctctt
     5701 tcgggatggc tttcgtcgcc ggcaacatcc tggttcctaa tcccgcaacg gggataacgg
     5761 cttttttgac tttcgtatta atggcagcca tttaaattct cctggactgt tcgtgttttg
     5821 aacgtgttca tatttctgta tcgcatccca gtatatcagc accccgaagg ggctaagttc
     5881 tgaaaaggag gcgagttagc ataattaaga caattactta tacgaatggc gacgatagta
     5941 ccaccagccg acattagcag gtaatgcaaa tttagcccgc gttatcgttt gctcattctg
     6001 cagacaacat caagcgcagt cgaccaccgg ttccccatat ttggcattgc caggcatcgc
     6061 atcgctggct caattgattc aaataagcgt tacctaaagt gcctaacgga acaccattac
     6121 tgatttgcac ctggtgttcg ccggtattta acgtcgcatt cagacccgca gaaaccagaa
     6181 tgagattttt cagttcgcga tgataatagc caactaatag cggaaactgc cccggcagat
     6241 tggcctgacg aagtaaatgg tttacctgct tcaataacgc gcccaactct ggcaaccgtt
     6301 gattttggtg tgcaagctgt tcctgtaata atccgttaaa caatgcgcgt aataacaagg
     6361 cagcaagtac gccattatgt ccagctcggg tgacatcaag gcaataaaat gccagatcgt
     6421 tttccgaaag tgcggcaata tcaagcacca ggccgggttt gtccgcggca accaattgac
     6481 gataattaac ccggcaatgg gaaatcacct gctgaaccgg cggttgtagt tcctgtaata
     6541 atttcgccgc tgcggcaggg ttatcaacca ttgcatccca gtcgcgaaaa agcctttcct
     6601 cttcctcaac gcgcgaatta aacatgctgg gatagagaca ggcaaaaacc atctcgcgca
     6661 agcgattcag atctttaact ggcttcagca aaacatcttc aacgcccaga cgtaacgctt
     6721 tggcaatatc tgccatattt tcggtggcag atatcaccag aaccggtgtc tggtcacctc
     6781 tgttgcgtat atgttccagc agtttaagcc cgttcattcg tggcatcgcg atatcacata
     6841 tcatcaggtc tggagtgaaa cctcccagca actcaagggc atccacccca tcagccgcca
     6901 gtaccgttgt cgctcccaat gaggaaaacc acgaatccag aagcgagcga aataccggct
     6961 catcttcaac aatgagaatc tgttttccga ccaatggctg cgtcatgttc tctcccctga
     7021 ctggctttac tcaatagtgg catgctattg ccacctgcgc ctgtcagaat taacttaagt
     7081 gtagataaaa attctggtca aatgttggtg cgtaccaacg gcaaaagttc gtccattttc
     7141 ttttccactg ccagctgtcc ggccgcaatg gcagcgtgcg cgcgatggaa atcaagcgta
     7201 gatatttgcg ggcaaacagg ttgaatcaga atatcgggcg gatcacctgc catgcggttc
     7261 cttttaaggc ggttctccag cacctggata gaagtggtca taatctctgt tgccgttggc
     7321 gctgtcaccg cccgacgtgt cgttatgctg cctaaccttt ctttcagacg cgcatgccac
     7381 ggcagagaat caccattctc gctattttct tcactgacat taaaggagag caaatcttgt
     7441 tgcattaaat gagcatcgtg ctgcaggtca accgctatca caatatcagc ccccaatgca
     7501 cgcgtgaggg aaataggaat tgggttaacg actgctccat caaccagcca gtagccgtta
     7561 tgtgcaacag gtgccatgag tcctggaata ctgcatgatg cgcgaatagc aagatggaga
     7621 tcgccttcag taaaccataa ttcacgtccc gtacttaaat tggtggcaac agccgcaaag
     7681 cgacgggaac aattttcgat ctctgtttcc ggcattattt cgcggtattg attgaagaca
     7741 cgctcgccgc gcagtaaccc accgcgctgc caggagagat ccatcaggcg taaaacatcc
     7801 caataactga aagaggtcac ccaatcttcc agcgcagata atcgatcgca tgcataggca
     7861 gcgcccacca gcgaaccaat tgaacatcct gcaacgatat caatttcaat acccactttt
     7921 tttagcgcat taataacgcc aatatgcgac caacctctcg ccgcgccaga tcccagcgcc
     7981 agccctattt ttatctttct cattattccc gcaagattcc cctggaatgc aatcgtagcc
     8041 acatcgctac tgctcggtta acatagtgct actcaggcgg ttaatacgcc gttattgttt
     8101 ccagggagat tatttgtgtc tcagctttgt ccctgtggta gtgctgtcga gtatagccta
     8161 tgttgccacc cttatgtgtc tggtgaaaag gttgcacctg atccagaaca tctcatgcgt
     8221 tcgcgttact gcgcttttgt gatgcaagac gcagattatt taataaagac ctggcatccc
     8281 tcttgtggag cagcggcgtt acgtgccgaa ttgatggccg gatttgcgca tactgaatgg
     8341 ttgggattga ccgtatttga acattgttgg caggacgccg acaatatcgg atttgtcagt
     8401 tttgttgctc gatttaccga aggtggtaaa acaggtgcaa taattgaacg ttcgcgattt
     8461 ttgaaagaaa acggtcaatg gtactatatt gacggtacac gtccgcagtt tggtcgcaac
     8521 gatccctgcc cttgtggttc aggtaaaaaa tttaaaaagt gctgcggcca ataatggttg
     8581 acggtacggt ttagcaaaca ctctcaacaa ggtttttcca gcaatgcatt cactccaacg
     8641 taaagttctg cgtactattt gtccggacca aaaaggtctg atcgcacgta ttaccaatat
     8701 ttgctacaag cacgagttaa atatcgtaca gaacaatgaa tttgttgatc accgtaccgg
     8761 gcgctttttt atgcgcacgg aactggaagg gatttttaat gattccaccc tgctggcgga
     8821 tctcgatagc gcattgccag aaggctccgt gcgtgagctg aatcctgccg gtcgtcgccg
     8881 gatagtgatt ctggtcacta aagaagcgca ttgccttggc gatttgttga tgaaagccaa
     8941 ttacggcggc ctggatgtcg aaatcgcggc agttattggt aaccacgata ctttacgttc
     9001 tctggttgag cgttttgata ttccgtttga gctggtaagc catgaagggt taagccgcaa
     9061 cgagcacgat caaaagatgg cggacgccat tgatgcttat caacctgact atgtggtgct
     9121 ggcgaagtat atgcgggtat taacgccgga atttgtggca cgcttcccga ataaaatcat
     9181 caatattcac cattcattcc tgcctgcgtt tatcggcgca cgtccttatc accaggccta
     9241 tgaacgtggt gtgaagatta ttggcgcaac cgctcactat gtgaatgaca atctggacga
     9301 aggcccaatc atcatgcagg acgttattca tgtcgatcat acctacacag ctgaagatat
     9361 gatgcgcgca ggtcgtgacg tcgagaaaaa cgtcttaagt cgtgcgctat acaaagtact
     9421 ggcacagcgc gtctttgttt acggtaatcg gacgattatt ctttaatcgc cagcaaaaat
     9481 aactggttac ctttaatccg ttacggatga aaattacgca accagttcat ttttctcaac
     9541 gtaacacttt acagcggcgc gtcatttgat atgatgcgcc ccgcttcccg ataagggagc
     9601 aggccagtaa aaagcattac cccgtggtgg ggttcccgag cggccaaagg gagcagactg
     9661 taaatctgcc gtcatcgact tcgaaggttc gaatccttcc cccaccacca tcacttttca
     9721 aaagtccgta aactctcaaa cgaatccgca attaaatatt ctgcccaagc ggggaaggat
     9781 gagaagcttc gaccaaggtt cgacttgagc gccagcgaga gagcgttgcc gcaggcaacg
     9841 acccgaaggg cgaagcgcgc agcgctgagt aatccttccc ccaccaccat cgcttcctta
     9901 aataatcaaa acctgttact ccgagctaat tttgcccgat ggcaccacgt ttaccgggcc
     9961 tacaatatcc tcccctgtag gtcggataag cgaagcgcat ccgacaactc accccgcacc
    10021 gtgcccataa aaaaaccccg ccgaagcagg gtctatgtga actaaaattc gcttagtgac
    10081 gagcgcgcac cagctggtac ttacgtgtca gatactccac cggtacgctc cagatgtgta
    10141 ccagacgcga gaacgggaac agcaggaata acgtcatccc cagcaccagg tgcagacgga
    10201 agataaacgc cacaccatcg aggtgttgag aagcgccacc gtggaaggtc accaccgact
    10261 gcgcccagcc aaccagtttc atcatctcgc taccgtccat atgctgagcg gagaacggaa
    10321 tggtcaacag gcccagcgcg cactggataa cgagcagcga caggatcagg atatccgctc
    10381 cggtagtggt tgcacgcacg cgtgggctga acagacgacg cttcagcaac agcacgccgc
    10441 caatcagaca cagcacgccg ctggcaccac cagcaaacat cgccattttc tgtttcactt
    10501 caatcggcag ccaggcttca tacatccagt gcggcgtcag cataccgaag aagtgaccaa
    10561 caaaaatccc cagaataccg atatggaaca ggttcgacgc caggttcatc cctttgcgat
    10621 ccagcatctg gctggacgcc gcgcgccagg tgtactgccc gtagtcataa cgcagccagc
    10681 taccaatcag gaagaccgcc ccggctatgt acgggtagat atcaaagaag aacatattca
    10741 ggaattgcat tagtgctgtc ctccggtggt gatattcaga tattgcggcg cgacggcacc
    10801 ggcaaagcga cgctgatgag cagtgattgc tgaatcaccg cagcctttgt cagcaaagaa
    10861 tttaacctgc tcttcttccc agacagcatc cagcgcctgc ggcgtatcat cgcgcgcttc
    10921 gtcggcaatt ttttccgcca ctttgtcgct gtcgatagcg gtattggcca atttcagcag
    10981 cagatcaaac atcacggcat aacggctttc acgctgttgc agacgcgcgc tcagcaatgc
    11041 cagaatcggc gcgatatctt tcaaaccttc cacggcttcg ctttgcggca gctgcgacag
    11101 gtactccaga tacagcggca gatggtccgg taattcgcgg ctgtttaact gcaagccgtg
    11161 ctgctcgtac tgcgccagca ggtccaccat cgcctggccg cggtcacggg attcaccgtg
    11221 aacatgttca aatagcaaca gtgacgtggc gcggccacgg tcgaacagtt cgctgtactg
    11281 ggcctgggca tcgagcggat ccatcgccgt taaatcgcgc aggaaaatgc ccagcgcatg
    11341 ggcatcttct ttcgacagat ttttcgacgc agcaatcgcc tcaaacatct cttgttgatg
    11401 ctgccataag gcagcatccg gatattcaag gagacgcgat acaatcacga gttcgatcat
    11461 ggatgcggct ccgttttgct ggtcacatcg atggcatcga tacgacggct gttgaacaga
    11521 ttgaatttgg tatctgaacc gtggcagcca tcaccaaagg taaagccgca gccatttttc
    11581 tccgggaagg cttcccgtgc cagttcacga tgactactcg gcaccacaaa gcgatcttcg
    11641 tagttagcaa tcgccagata acggtacatc tcctgtgcct gggcttcggt cagaccgacc
    11701 tcttccagcg cacgggtatc aactttaccg tcaacggttt cagcacgttt gtaatgacgc
    11761 atcgccagca tacgtttcag tgcgcgcagt accggtttgg tatcaccggc ggtcagcaga
    11821 ttcgccagat actgtaccgg aatacgcaag ctttcgacgt ctggcagaat gccgttgcta
    11881 cccagctcac ccgcgtctgc tgcagactga atcggagaca gaggcggcac gtaccagacc
    11941 atcggcagtg tgcgatattc tggatgcagc ggcagcgcca gtttccattc cattgccatt
    12001 ttataaaccg gcgactgctg tgcggcttca ataacgctca gcggaatacc gtctttaatc
    12061 gcctgctcga tgactttcgg atcgttcgga tcgaggaaca cctccagctg acgctggtaa
    12121 agatctttct cgttctcggt gctggctgca cgttcaatcg cgtcggcatc gtacagcagc
    12181 acgccaagat aacggatacg accgacacag gtttctgagc acacggtcgg ctgacccgct
    12241 tcaatacgcg gatagcagaa gatgcacttc tcagacttac cgctcttcca gttgaagtag
    12301 atttttttgt acgggcatcc ggtgatgcac atacgccagc cacggcattt atcctggtcg
    12361 atcaggacga tgccatcttc ttcacgcttg taaatcgcac cgctcgggca ggtcgccaca
    12421 catgccgggt tcaggcagtg ttcgcacagg cgcggcaaat acatcataaa ggtgttttcg
    12481 aactggctat acatcgcctt ctggatgttg tcgaagttct tgtctttcgc cagtttgtca
    12541 aactcaccac ccaggtcatc ttcccagttc ggcccttttt cgattttcgc catccgttcc
    12601 ccggtaatca gcgaacgcgg acgggcaatc ggctgcgatt tgctgccttc cggcgcggta
    12661 tgcaggttct gatagtcaaa atcgaacggc tcgtaataat cgtcgatccc cggcagatgc
    12721 gggttagcga agattttacc cagcaacatg gcacggttac ccatgcgcgg ctgcagtttg
    12781 ccgttgattt tacggatcca gccgcctttg tatttttcct ggttttccca gtcagtcggg
    12841 aagccctgac ccggcttggt ttccacgttg ttgaaccacg cgtattccac gccttcacgg
    12901 ctggtccaga cgtttttaca ggtaactgaa caggtgtggc agccgatgca cttatcgaga
    12961 ttcagcacca tgccgacttg tgaacgaatt ttcattttac gctctcctgt acctggtcat
    13021 tgccttcgcc atctaaccag tcaatgttct tcatcttacg cactacaaca aactcatcgc
    13081 ggttagaacc tacggtgccg tagtagttaa agccgtatgc cagatgggca tagccgccga
    13141 tcatatgcgt cggtttcggc gtgatacggg tgaccgagtt atggatacca ccacgctgtt
    13201 gggtaatttc cgaaccaggc aggttaacga tacgttcctg cgcgtggtac atcatggtca
    13261 tccctgccgg aacacgctgg ctgacaacag cacgggcagt cagagcaccg ttgctgttga
    13321 atacttcaat ccagtcgtta tcggcgatac ccagatcttt ggcatcggct tcactcaacc
    13381 agaccaccgg accaccgcga cctaaagtca gcatcagcag gttgtcgctg taggtggagt
    13441 ggatacccca cttctggtgc ggcgtcagga agttgagcgc tttttccggg ttgccgttgg
    13501 atttctggcc tatcacttct ttcaccgaac gggtgtcgat cggcggacga taaaccagca
    13561 ggctttcacc gaaatcacgc atccactggt gatcctgata cagttgctga cgaccagaga
    13621 gcgtacgcca tgggatcagc tcgtgaacgt tggtgtaacc ggcgttgtaa gaaacgtgtt
    13681 catcttccag accagaccag gtcgggctgg agataatttt gcgcggctgt gcctgaatat
    13741 cgcggaagcg gatcttctcg tcttctttat tcagcgccag atgcgtatgg tcacgaccgg
    13801 taaattcgct cagggcagcc caggctttca cggctacctg accgttggtt tccggtgcca
    13861 gtgtcaggat catctctgcc gcatcaattg cggtgttcag catcggctgg cctttcgccg
    13921 gaccttccgc tttggtgtag ttgagcttac gcagcagatc catctcgctc tgggtgttcc
    13981 aggcaatccc tttaccgcca ttaccgattt tctccatcag cgggccgata gaggtaaagc
    14041 gttcgtaagt cgccggataa tcgcgctcta cgaccataat gtgtggcgcg gttttacctg
    14101 ggatcaggtc gcactcgcct tttttccagt ctttcacatc cagcggctgc gccagttcag
    14161 cggcagagtc atgctggata ggcagcgtga cgatgtcggt ttctttaccc agatggccga
    14221 cgcacacttc ggagaatttc ttcgcgatgg ctttgtagat ttcccagtcg cttttcgctt
    14281 cccaggccgg atcgaccgcc gcagacagcg ggtgaataaa cggatgcata tccgaagtat
    14341 tcatgtcgtc tttttcgtac caggtcgccg tcggcaaaat gatgtcggaa tagagacagg
    14401 tgctcgacag acggaagtcc agcgtaacca ccagatccag cttgccttcc agaccattgt
    14461 cctgccagtc cacttcttcc ggcttcacgc cgccctgttg ccccagatct ttaccctgga
    14521 taccgtgctc cgtccccagc aggtacttga gcataaactc atgaccttta ccggaagaac
    14581 cgagcaggtt agaacgccag atgaacaggt tgcgcgggtg gtttttaccg ttttctggtt
    14641 gttctgccgc aaaacggatg gaaccctctt tcagggattt caccgtatag tccaccggat
    14701 tcatcccggc tttttccgct tcgccagcga tagtcagcgg gttagtgcct aactgcggtg
    14761 cagacggcag ccagcccatg cgttccgcac ggacgttaaa gtcgatcaag tgtccggtat
    14821 agcgggattt gtccgccatc ggtgacagca actcttccgc cgtgacggtt tcataacgcc
    14881 actggctgga gtggttatag aaataagaag tgctgttcat gtgacgcgcc ggacgctgcc
    14941 agtcaagggc aaacgccagc ggctgccagc cggtttgcgg acgcagtttt tcctgaccta
    15001 catagtgcgc ccagccgccc ccgctctgac cgacacagcc gcagaaaatc agcatgttga
    15061 tcagaccacg atagttcata tcgaggtgat accagtggtt cagccccgca ccgacgataa
    15121 tcatcgaacg accgtgcgtt ttatcagcgt tatcggcaaa ttcacgggcg atgcgaataa
    15181 tctggctgcg agaaacgccg gtaatctgct cggcccaggc cggggtataa gctttcacat
    15241 cgtcatagct ggttgcacag ttaacgtcgt tcaggccacg ttccagaccg tagtttgcca
    15301 gcgtcagatc ataaacggtg gtcaccaggg cggtgctgcc atcagccagt tgcaggcgtt
    15361 tcaccggcag tttgtgcagc agcacgtttt ccagttccac tttgttgaag tgttccgtgc
    15421 cgtcgccacc aaagtacggg aagcctacct cagcgatctc atcctggcta cccagcaggc
    15481 tcagttgcag ctcggtttct tcgccagttt tgccgtcgcg ctgctcaaga ttccatttgc
    15541 ccttctcgcc ccagcggaag ccaatagaac cgttcggcgc aaccatttcg ccattggtat
    15601 taaaggcgac agttttccat tccggattgt tttcctggcc cagcgcatca accagatcag
    15661 cagcgcgcag catacgacct gcagcgtagt aaccgtcgcg ttcttccagc atcaccagca
    15721 tcggcatgtc ggtgtagcga cgcacatagt cggtgaaata ctggcttggg ttgtcgaggt
    15781 ggaattcacg cagcattacg tggcccatcg ccagcgccat tgccgcatcg gtgccctgtt
    15841 tcggtgccag ccacagatcg cacagtttgg cgatttcagc gtagtctggt gtgacggcaa
    15901 cagttttggt gcctttgtaa cgcacttcag taaagaagtg agcatccggg gtacgcgtct
    15961 gcggcacgtt tgaaccccag gcgatgatgt agctggagtt ataccagtca gcagattccg
    16021 gtacgtcagt ttgctcgccc caggtttgcg gagacgcagg aggcaggtcg cagtaccagt
    16081 cgtagaagct taagcaagta ccgccaatca gcgagagata gcgtgcaccc gatgcgtaag
    16141 aaaccatcga cattgccgga attggcgaga agccagcgac acggtccggg ccgtagtttt
    16201 tgatggtgta aacgttagat gcggcgatca gttcgttcac ttcctgccag gaagaacgaa
    16261 caaaaccacc gcgtccacgc gcctgcttaa agcttttcgc tttatcggcg tcttcaatga
    16321 tagaagccca tgcctcaacc ggatcgctat gcagcgcctt cgcttcacgc cacattttca
    16381 tcaggcgttt gcgcatcatc gggtatttca ggcggttggc gctgtaaaga taccaggagt
    16441 agctggcacc gcgcgggcag ccgcgaggtt catggtttgg cagatccgga cgggtacgcg
    16501 gatagtcagt ctgctgggtt tcccaggtga ccagaccgtt tttgacgtag attttccagc
    16561 tgcaggagcc ggtgcagttt accccgtggg tagagcggac gattttgtca tgctgccaac
    16621 gctggcgata tccatcctcc cagtcacggt tggtattgag aagctggcca tgcccatcgg
    16681 caaaggtttc acccttctgt ttgaagtagc gaaaccggtc caggaattta ctcatcggtt
    16741 ttctcctgtg ggagcctgtc ggccctctga taaatcgaca ttgctaatgt ttaagggcaa
    16801 ggtaacgctc tgaaacagcg tgggaattga taacgatcaa gagtgatggg gatgaaaaat
    16861 aaagtaaatt cctaagatac ccctttagga taattaacag ccaccacata aca
//
LOCUS       DAPGWB010000096        16706 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.097, whole genome shotgun sequence.
ACCESSION   DAPGWB010000096 DAPGWB010000000
VERSION     DAPGWB010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 16706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16706
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.097"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..631
                     /locus_tag="RHX79_003024"
     CDS             <1..631
                     /locus_tag="RHX79_003024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDV2198170.1"
                     /translation="LGLVATAGLAWGAKYLEITATKYDSPPMYVAIGLLLLCMYGLSK
                     DINKINAVIAGVIYLFLLSLVAIVVASLAPVPAIIIVFSTAGAMFLISMLAGLLFNVD
                     PGSHRFIIMMTLTGLALVIIVNAALMSERPIWVISCLMIVLWSGIISHGRNKLLELAG
                     KCHSEELWSPVRCAVTGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH"
     gene            complement(667..1623)
                     /locus_tag="RHX79_003025"
     CDS             complement(667..1623)
                     /locus_tag="RHX79_003025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
                     /protein_id="HDV2198171.1"
                     /translation="MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIR
                     DYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTW
                     VGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVD
                     QTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMV
                     MGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGT
                     IIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM"
     gene            complement(1623..2864)
                     /gene="clsB"
                     /locus_tag="RHX79_003026"
     CDS             complement(1623..2864)
                     /gene="clsB"
                     /locus_tag="RHX79_003026"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsB"
                     /protein_id="HDV2198172.1"
                     /translation="MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFE
                     DDVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLF
                     GMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDIL
                     QFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQ
                     ARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVK
                     GGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRD
                     NLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWLPAHTPRLAQVDP
                     PAQPTMETQDRVETENTGVKP"
     gene            complement(2861..3622)
                     /locus_tag="RHX79_003027"
     CDS             complement(2861..3622)
                     /locus_tag="RHX79_003027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HDV2198173.1"
                     /translation="MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADI
                     VCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRY
                     PIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEW
                     VNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLD
                     RIYVKNASASAPTALPLRTWRHLSDHAPLSAEIHL"
     gene            3755..4165
                     /locus_tag="RHX79_003028"
     CDS             3755..4165
                     /locus_tag="RHX79_003028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhQ family protein"
                     /protein_id="HDV2198174.1"
                     /translation="MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGL
                     CALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLL
                     AIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR"
     gene            complement(4127..5233)
                     /locus_tag="RHX79_003029"
     CDS             complement(4127..5233)
                     /locus_tag="RHX79_003029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2198175.1"
                     /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE
                     VTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFP
                     ADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELV
                     VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI
                     FIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS
                     LCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK
                     DASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM"
     gene            complement(5244..6377)
                     /locus_tag="RHX79_003030"
     CDS             complement(5244..6377)
                     /locus_tag="RHX79_003030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2198176.1"
                     /translation="MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFG
                     YGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRG
                     LVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
                     FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLS
                     TEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTL
                     GMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFV
                     STLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD"
     gene            complement(6370..8106)
                     /locus_tag="RHX79_003031"
     CDS             complement(6370..8106)
                     /locus_tag="RHX79_003031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV2198177.1"
                     /translation="MNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGA
                     GKTTLMRMLAGLLKPDSGNATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLN
                     LYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL
                     LLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ
                     GEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPD
                     DIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKE
                     LTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMD
                     LKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGL
                     KSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVE
                     KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ
                     LIHDWDKEHSNE"
     gene            complement(8099..9094)
                     /gene="hlyD"
                     /locus_tag="RHX79_003032"
     CDS             complement(8099..9094)
                     /gene="hlyD"
                     /locus_tag="RHX79_003032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308900.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HDV2198178.1"
                     /translation="MKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTV
                     NLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLA
                     GYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQAT
                     LKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRA
                     VEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQI
                     GFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGNEAGHE"
     gene            complement(9097..9768)
                     /gene="cecR"
                     /locus_tag="RHX79_003033"
     CDS             complement(9097..9768)
                     /gene="cecR"
                     /locus_tag="RHX79_003033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CecR"
                     /protein_id="HDV2198179.1"
                     /translation="MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQN
                     IAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEETERLFAQPQPDRAAIRELILRA
                     CRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDA
                     NDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGL
                     SQRSL"
     gene            9997..11361
                     /gene="rhlE"
                     /locus_tag="RHX79_003034"
     CDS             9997..11361
                     /gene="rhlE"
                     /locus_tag="RHX79_003034"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlE"
                     /protein_id="HDV2198180.1"
                     /translation="MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS
                     AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL
                     NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR
                     MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD
                     QVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH
                     GNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG
                     RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ
                     QRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP
                     AAAQ"
     gene            complement(11593..12075)
                     /gene="ybiA"
                     /locus_tag="RHX79_003035"
     CDS             complement(11593..12075)
                     /gene="ybiA"
                     /locus_tag="RHX79_003035"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-glycosidase YbiA"
                     /protein_id="HDV2198181.1"
                     /translation="MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTW
                     PTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRDRSKPLRKNWESVKEQVMRKALR
                     AKFEQHPELRALLLATAPAKLVEHTENDAYWGDGGNGKGKNRLGYLLMELREQLAIEK
                     "
     gene            12195..14345
                     /gene="dinG"
                     /locus_tag="RHX79_003036"
     CDS             12195..14345
                     /gene="dinG"
                     /locus_tag="RHX79_003036"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HDV2198182.1"
                     /translation="MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG
                     EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKK
                     IIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLK
                     GDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAE
                     VVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQL
                     DLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEH
                     RFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRA
                     LGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR
                     SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRFE
                     PSIDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGD
                     QPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVI
                     TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKR
                     LLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR"
     gene            14373..15335
                     /gene="ybiB"
                     /locus_tag="RHX79_003037"
     CDS             14373..15335
                     /gene="ybiB"
                     /locus_tag="RHX79_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein YbiB"
                     /protein_id="HDV2198183.1"
                     /translation="MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGG
                     VLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPADKPMPIVIPSYNGARKQANLTPLLA
                     ILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
                     FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDI
                     GGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDPAGSELLPQAKDPETTAQ
                     WIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF"
     gene            15476..16561
                     /gene="hcxB"
                     /locus_tag="RHX79_003038"
     CDS             15476..16561
                     /gene="hcxB"
                     /locus_tag="RHX79_003038"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxycarboxylate dehydrogenase HcXB"
                     /protein_id="HDV2198184.1"
                     /translation="MESGHCFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAG
                     HDSHGIGMIPSYVRSWSQGHLQINHHAKIVKEAGAAVTLDGDRAFGQVAAHEAMALGI
                     EKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRF
                     GTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPA
                     VMQESPLGSLLTFAEHKGYALSAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTII
                     INPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQEQGIPLDAGS
                     WQAICDAARQIGMSEETLQAFCQQLAS"
BASE COUNT         3891 a         4443 c         4525 g         3847 t
ORIGIN      
        1 tttaggtttg gtggcaaccg cagggctggc ctggggtgct aagtatctcg aaattacggc
       61 aaccaaatat gattcaccac caatgtatgt cgccataggg ttattattac tttgtatgta
      121 tggcttaagt aaggatatca acaagataaa tgccgtcatc gcaggcgtaa tatatctgtt
      181 tttactctct ttggtggcga ttgtcgttgc tagtttagct cctgtacctg ccattatcat
      241 cgtgttcagc actgcgggcg cgatgttttt aatcagtatg ctggccggtt tattatttaa
      301 tgttgatcct ggttctcacc gttttatcat tatgatgacg ttgacagggt tggccctggt
      361 gatcatcgtg aatgccgcat taatgagtga acggcccatt tgggtaataa gttgcttaat
      421 gattgtgtta tggtcaggca ttatctcgca tggacgaaat aagctccttg aactggcagg
      481 aaaatgccat agtgaagagt tgtggagtcc ggttcgttgc gctgttacag gtgcattaac
      541 actctattac tattttatcg gcttctttgg gattcttgca gcgatagcta taacgcttgt
      601 ctggcaaagg catacgcgtt tttttcatta gtcgtaaatg cacatactaa agaacttaac
      661 tgaacttcac atcgccgctt catttttcgc ccgtagcttc ttcgcctggc tttccagcaa
      721 caggtaacag atcagcgcca gcagcagtgg gataaagtaa tacagcacac ggtaagcgag
      781 tagggcggcg ataattgtgc ctttggatgt atgctcccca gccagtagcg cgataaacac
      841 cgcttccagc acaccaattc ccgccggaat atgcacgatg acaccagcaa tactactaac
      901 cagcaacacg cccagtacaa agaaatagtt cacgctttga ccaagtaaca gccagataat
      961 cgctcccatt accatccagt taacgctgga aatcagcatc tgggcgaggg cgaatttcca
     1021 cgaaggcagc accagctttt gccctttaat ggtcatatgg cggtgtttcg caaaagcgca
     1081 aaaccacaaa taaaccgcga taatcatcag taagccaatg ccgagaatgc gcagcgtggt
     1141 ttgatcgaca taccagtgat ccggcaactc caccacgcct gcggtaaaga taatccccgc
     1201 cagtaaaata tagcccagcc agttggtggt aatactgagc gagaaaatcc gcgtaatggt
     1261 gctgcccggt aaccctagcc gggagtacaa acgatagcgc ataccaatgc cgccgaccca
     1321 ggtactgagc gtcaggttga aagcgtagca gataaacgac accagcatca cctggcgctt
     1381 cgccagtttg tgaccgcagt agaaacgggc gagcaggtcg tagcaaccgt aaatcagata
     1441 gctgacgacc accagcccga ccgcactaag cagcgcaacg cgattgtagt cgcggatgac
     1501 cttccagacc tcttcccagt ccactttttt ggcgtagacc accagcaaca caatcaccgc
     1561 gataaaaaac agccaggtga ggatcttctt tgctaagcgc cagcgcgggt gtgatttact
     1621 catcagggtt ttacccccgt gttttcagtt tctacccgat cctgagtttc cattgtcggt
     1681 tgtgcggggg gatcaacctg cgccagacgt ggtgtgtgtg ccggaagcca gccaaccagc
     1741 gccgggaagt ggcgtaaaaa gtggaacgcc agcacgcttt tggtcaggtt ccaccaggtg
     1801 cgtttcggca gcatggtctc atcgacctgc tgacaatctg cggcaataat gccgttcaga
     1861 ttatcgcgca gcgtctggtt aaaatgacga tcatggatga tgacatttgc ttcgagattc
     1921 agtgacaaac tgagcggatc gagattactg gaccctactg tcgcccagtg atcgtccatc
     1981 aatgccactt tgccgtggag cgggcggcgg cggtactcaa atacctgaac gccgccttta
     2041 accagatagt tatacagcaa gcgcgcaccg actctgacaa tcggcatatc cggttcgccc
     2101 tgaatgatca gtttgatccg caccccgcgc cgcgccgctt tacgcaaggc gtgtaaaaat
     2161 cgatagccgg ggaagaagta ggcgttggcg ataatgactt ctcgccgcgc ctgagtgagc
     2221 attttcagat agtgacgttc aatatcatcg cgatgttctt cgttatcgcg ccagaccagc
     2281 aatacctgcg cttctcccgg ctggcggttc tcttccgctt tgtgatgacg tcgccaccag
     2341 cgtcgtgccg cgctctgtcc aggcaggttt tccagctcaa actggagaat atcttcgaca
     2401 atcggccctt caaggcgtac cgcgtaatcc tgtttagcct ctggaccgta gctggacata
     2461 tgctcggcgg agtaattcag cccgccaata aaggcgatac gcgcgtcgat caccacaatt
     2521 ttgcgatgca tccggcgaaa cacattggtg cgcataccaa aaaggcgagg gcggggatcg
     2581 tagtagcgaa ataccacgcc agctgccgtc agttcattga caaactcatc gctgagatcc
     2641 ggcgaaccgt agccatccag caagacttcc gctttaaccc cgcgttgcgc tgctgccagt
     2701 agtgccgcat gcagctgttt gccgacgtca tcctcaaacc agataaacgt ttcaagaatg
     2761 atgcgttctt gtgcctcgcc aatcgcctta aacaccgcgg gataatattg ctcgccgttt
     2821 tccagcaact ggatcttatt gccttcgcgc cagctacatt tcataaatga atctccgcac
     2881 ttaaaggggc atgatcagaa aggtgtcgcc atgtccgcag cggcaacgcg gttggcgcgc
     2941 tggcgctggc atttttgacg tagatcctgt ccagtcgtag tagaggaaat tgcaccggaa
     3001 acgtgcgcgc cgggcgtccg tgggcgcggg taaaaatctc atccagtccg gcctgcactt
     3061 ttaacggatg attagctttt tgccgccagt cattgaaatc acccgccacc aataccggtt
     3121 cgccgtccgg tagctcattc acccattcgg cgagcatcgc aagctgcgcc tgacggtgcg
     3181 cctcacgcag gcccagatgt acgcacatca catgaatcgc ttttccggtc atcggtggca
     3241 caatgcggca gtagagcacg ccgcgctttt ccgcaccatc gaccgaaaca tcgcgattct
     3301 cataatgttc aatgggataa cgcgacagta cggcgttgcc gtgatgccct tccgggtata
     3361 cggcattgcg accgtaggca aaatcgctcc acatcgtgtc ggcgagaaac tcgtagtgcg
     3421 aggtatcggg ccagttttcc acatgcagcg gatgaacttc gtgcgcgccc atcacttcct
     3481 gcaggcaaac aatatcggcg ctgacggtac gcaccgcgtc gcgaagttcc ggcaaaatga
     3541 agcgtcggtt aaacgcggta aaacctttgt gaatgttgat ggtgagcacc ttgaacgaaa
     3601 attgttgtgt ttgatcgggc ataattttcc tgtctttgcc tcttatctca ttgaaatagt
     3661 gtagtcggcg tcacaaaaag gtgcggtctt acggaatttt ccgtaaagtt cggtactctg
     3721 agtaagtaga gataaattct tcaggagaga agccatgaag tggcaacaac gtgttcgtgt
     3781 cgcaactggt ctaagttgct ggcagattat gttgcattta ctggtagtgg cgctgctggt
     3841 ggtgggctgg atgagtaaga ctctggttca cgtcggcgtg ggattatgcg cactgtattg
     3901 tgtcacggta gtgatgatgt tggtgtttca gcgccacccc gagcaacgct ggcgtgaggt
     3961 ggcagacgtg ctggaagagc tgaccacgac ctggtatttt ggcgcagcgc tgattgtgct
     4021 gtggctgttg tcccgtgtac tggaaaacaa ctttttgctg gcaattgcag ggctggcaat
     4081 ccttgccggc ccggcggtag tgtctttgct ggcgaaagat aagaagttac atcaccttac
     4141 gtctaaacat cgcgtacgcc gctgaccctg tcgtggccgt tatcaccagt agcggccaca
     4201 aactattcca cacaatatcc agactcgcat ccttcaaata aatctgcttg gtaatgtccg
     4261 taaagtggcg aatagggtta atccacgtca ggttttgcag ccatactggc atgttttcca
     4321 ccggagaaac gtaaccggaa aggagaatgg cgggcatcat aaaaacaaac acgccgataa
     4381 acgcctgctg ttgtgtcgag cagagtgatg aaatcaacag accgaatccc accagcgata
     4441 aaccgtaaat caccatcgta aagtagaaca gcgccagcga tccggcgaag gggatttgat
     4501 acgcccagat accaatcgcc agcacaatgg tggcctggaa ggtggcgaca attaacgccg
     4561 gtacggcttt gccgatgaag atctgccagg tggtgagcgg cgaaaccagt agctgatcga
     4621 gcgtaccttg ttcacgttcg cgggcgacgg aaagtgaagt gacgatcatt acgccgatag
     4681 tggtgatcat ggcgatcagc gacggcacca caaaccattt gtagtcaaga ttcgggttat
     4741 accagttgcg taccaccagc tcgctgttgt taggtttcgg ttttccttcc agcagctcct
     4801 gctgataatt tttgacgatc tgttgcaggt agttggcggc aatttgcgca ctgttggagt
     4861 tacgcccgtc gaggatcaac tgcaacggcg cggtctggaa ggtatccagt ttgcgcgaga
     4921 agtcagccgg gaaacgcacc agtagtaacg ccttttgtgt gtcgatggtt gggcggatct
     4981 cctgtgggct tttcagcagc agcacatgag taaaggcgct ggcgcgggca aaacgttggg
     5041 tcagctccac cgaatgctcg ccgttatctt catcgtagat ggcgatggtg gcgttagtca
     5101 cttccagcgt ggcggcgaac gggaacagaa tcacctgaat aagcacaggt aaaatcagaa
     5161 tcgcgcgggt ttgcggttcg cgcagcagcg actgcaactc tttgcggatt aacgtccata
     5221 agcgatgaaa catgctcttc tccctaatcc agccgacgtt tggttttcag ccacgtcagg
     5281 ccgataaaca tcaccgccga agcgatcaaa aacagcacgt ttaccaccag caccactgga
     5341 atattcccgg cgaggaacag gctttgcagg gtgctgacga aataacgagc gggaataatg
     5401 tacgtcaccg cgcggatcac cgcgggcata ctgtcgatct gaaaaataaa gccggaaagc
     5461 ataatcgacg gcagaaaagc ggcgttcagg gcgacctgag cggcattgaa ctggttgcgg
     5521 gtaatcgtgg aaatcagcag ccccatcccc agggtactga gtaaaaacag gctggagata
     5581 aaaaacagaa tcagcagcga cccgcgatac ggcacgccga gaataaacac tgacaccagc
     5641 atacacagca acatcgccag catcccgaga aagtaataag ggatcagctt acacagcagc
     5701 agttccgtgc gggtaatctc cgtagagagc agagcctcca tggtgccgcg ttcccattct
     5761 cgcgccacca ccagcgaggt gagaatcgcg ccgatgaccg tcatgataat ggtcaccgca
     5821 ccggggataa tgaagtgctg gctaatcgcc gccgggttaa accagtagcg ggtttgtaca
     5881 tcaataagcg gttcaaaagt ctgcccgttg tcctccgctc gctgcatttg ccagatctgc
     5941 cagatccctt cgacataccc ctgtacaaag ttagcggtat tcggctcact gccgtcggtg
     6001 atcacctgaa tcggtgcggt ggcgttggcg cgctccatct gttccgcaaa atccaccgga
     6061 ataaccacca gaccgcgaat tttccccgcc tgcattttgg cgatcagttc ctgacggtta
     6121 tcgctgatgg tggcgtcgat gtagggcgaa ccggtcatgg tgtgggtgaa atccagcgcc
     6181 gcttcgctac gctgttccag taaaatcccg acccgcagct tgctggagtc gaggttaatg
     6241 ccgtaaccaa aaataaacag cagcaacagc gggatcacta ccgcaatcag ccagctactc
     6301 ggatcgcgaa cgatctgccg cgtctctttg acgcacagcg cccgcacgcg acgccaggaa
     6361 aggatcgggt tactcattgc tatgctcctt atcccagtcg tggatcaact gaataaaggc
     6421 ttgctccatg gtgggatcgg gttgctcgtc gttggccgac tgcgctttca aatcatccgg
     6481 cgtgccgctg gcaattaatt tcccacggta caccaggccg atgcggtcgc aatattctgc
     6541 ttcatccata aagtgggtgg tgaccatcac cgtgacgcct ttctctacca tgctgttgat
     6601 atgtagccag aattcgcggc gagtaatcgg atcaacgccg gacgtcggtt cgtcgagaaa
     6661 cagaatgtcc ggttcatgca tcagcgagca ggccagtgcc agccgctgtt taaaacctaa
     6721 tggcagttca tcggtggcgt gggaggcgat acttttcagg ccgaacgcct cgctcatacg
     6781 ggagattttt tcgttctgcg cccgaccgcg taagccatac acaccagaga aaaagcgtaa
     6841 attctgttcg accgtcaggt taccgtagag cgaaaacttt tgcgccatat agccgagatg
     6901 ctggcgcgct ttaccagaac tctctttcag atccatcccc agcaccagcg cctggccgga
     6961 agtcggcacc agcaaaccgc acatcatctt aaaggtggtc gatttacccg cgccgtttgg
     7021 ccccagcaaa ccaaaaatct ccccacgttt aacggcaaag ttgacgtgat cggtggcggc
     7081 aaaatcacca aatttcttgg tcagttcttt cgcttcgatc accgtctcgc cgggtgtgcc
     7141 ttctaccgta tgtaatattg cgcccagcgg cgattctgag gttccggcac cacccagcaa
     7201 atcaataaat gcatcttcaa aacgcggcgt agtttcgttg atgttgattt ccggcatccc
     7261 gtcggcatgg cgaatatcgt ctggtgtggc ctcttttttg aggatcagac gtaccgattt
     7321 cccctgaatc atgccgtcgc tgacctgtgg cagtttcaag gcgcgttgca atagtttgcg
     7381 gttgccctcg tgtggactgg tcatcagaaa actgcgtccg gccatggttt gtgtcagggc
     7441 ttttggttcc ccctgataca gcaactcgcc ttcgttcatc agtaacacgt cacggcactg
     7501 ctcggcttcg tcgagatacg aggtactcca gaggattaac atcccttcgc ctgccagctc
     7561 atgcaccatc tgccacagtt cgcgccgtga gatagggtca acgccgacgc cgggttcatc
     7621 gagcagcaac actttcggtt cgcccaccag ggtacaggcc agaccgagtt tttgtttcat
     7681 cccaccggag agcttgcccg ccaggcgtcc ggtaaacggc ccaagagacg taaactccag
     7741 caggcgagca aaagtttgct tacgtgcctc gccggtgacg ctgcgcaaat ccgcgtacag
     7801 attgaggttc tccatcaccg tgagatcttc atacagacca aatttctgcg gcatatagcc
     7861 gagcacggcg tgcagcgcgc cgtcgttttt gattggatca aagccaatca ccgtggcatt
     7921 gccgctgtcg ggtttcagta atcccgccag catccgcatt agcgtggttt tacctgcacc
     7981 atccggcccc accagccccg tcacataacc ggcgtgaatg gtacaatcga gcggcgcgac
     8041 ggcgggcttg tccatgcccg gaaagcgttt ttccaggccg ttcagcgtga taacggcatc
     8101 attcatgtcc tgcctcgtta ccgaattgca ccgtcaccgg cattccctgg cgtaacgcat
     8161 catcggcgtc ggtcaccaca atacgcaggc gatagacgag gtcggtacgc agatccggtg
     8221 tttcgacggt tttcggggta aattcagcag tcggcgaaac gaaaccaatc tgcccgtgat
     8281 agggcttgtc cgggcgacca tcggtataaa gcagcacttt gcgccccggc tgggcctggt
     8341 caagattacg ttcgtcaaca taggcacgta cccacaccgg acgcgttagt gaaacggtaa
     8401 acaccgtgcc accttcattg aggaccgtgc ctggctccac cgcgcgcgtt aacagcgtgc
     8461 catcagacgg ggctatcaac gttgagtcct gcaaattcaa ctccgcctgc gccagttgcg
     8521 cctgcgcctg ttcgaggctg gctttcgcct gggcgatgtc ctgttcacgg ttaccggaac
     8581 ggtactgacg caatttatcc tgtgctgatt tcagcgttgc ctgcgcctgg tcgcgcgagg
     8641 agcgggcatt ttccaggtcg tttgccgaaa tggtgcggct tttccacaac ccttgctggc
     8701 ggttatagaa gttctgcgca tagtcatagg cggcttgcgc ctgtttcacc gctgcggcgg
     8761 cctgagcgat ttcttcatcg cgatacccgg caagcatcag gtcatactgc gcctgtgcca
     8821 ccgaaacacc cgctttcgcc tgcatcaggg caatctcata cggcttgtga tccagttcgc
     8881 ccagcacctg gcccgctttg atagcatcac cttcgtccac cgccagcgat tcaacgcgcc
     8941 ccccaacacg gaaactaaga ttcaccgtac gaatatccac gttgccatac agcgtcaggc
     9001 cgttatcctg gcggctttga taccaccagt agcctccggc aaccacggcg gcaagtacca
     9061 ctaccgccaa tccgatcacg acaggttttt tcatcactac aaactccttt gcgataatcc
     9121 ttgcaaaatc aggtcgatat gacaggtcac cgtctggttg atcagttcgg tcttttcttc
     9181 atcgaacgcg gtccagccgg tacgtaacag aattgtttct ttgccaagac ggaacgccag
     9241 aatctcacca atcaacgcat gagtatggag gatcatgcgg gtatcgttgg cgtcgcagcc
     9301 ggtccaggcg gcaatcaggc gtgtcaggtg gctgtgtagc gggctaatca cctgttcgtg
     9361 caccaggtga taggctgccg tgggagagag ctgctcacgg gagataaact tgctgaggtt
     9421 gacggtgtca tcctgggtga gcagcttaat catgttcctg caggcgcgaa ggatcagttc
     9481 acggatggct gcgcgatcag gctgtggttg tgcgaacaag cgttcggtct cttcggcgtg
     9541 cggacggaac tgctcgccaa taaaatcggc aatccactgg gcgcaggcga ggtacaaatc
     9601 ttctttcgaa ccgaagtagt aggtgatggc agcgatattc tgcccggcct gggcggctat
     9661 ctcgcgggtg gtggcgttca ttccatattc accaaactgc gccagtgcgg cagcaatcag
     9721 ctgttttttc gcctgttcac ccttgattgt catggcagga ttattcatcg cacagtccat
     9781 tcttaatcaa atgattgatt aagattatga ctccataggg gagttgtcca gtatggctaa
     9841 gaattttagc tacgccagtc acagggataa tttatgcgct gcgtcacaaa aactgctaca
     9901 ctccgctccc tcatgacatt gtggtttttg tcattttcct tttcagtatc tccctgaaaa
     9961 ctacaccggt aacggtcggg gcggttcgga gtagttatgt ctttcgattc tttgggttta
    10021 agccctgata tcctgcgcgc cgttgccgag cagggttacc gtgaacccac ccctattcag
    10081 cagcaggcga tccctgcggt gctggaaggc cgcgacctga tggctagcgc ccagaccggt
    10141 accggtaaaa cagcgggctt tacgctgccg ctgttgcaac acctgatcac tcgccagccg
    10201 cacgccaaag ggcgtcgtcc ggtacgtgcg ctcattctta ccccgacccg tgaactggct
    10261 gcgcagattg gcgaaaacgt ccgtgattac agcaaatatt tgaacattcg ttcgctggtg
    10321 gtgtttggcg gtgtcagcat taacccgcaa atgatgaagc tgcgcggcgg cgttgatgtt
    10381 ctggtggcaa caccgggacg tttgctggac ctggaacatc aaaatgcagt gaagctggat
    10441 caggttgaaa tcctcgtcct cgatgaagct gaccgcatgc tcgacatggg ctttatccac
    10501 gatatccgtc gcgtgttaac aaaactgcca gcgaaacgcc agaacctgct gttctctgcg
    10561 accttctctg acgatattaa agccctggcg gaaaaactgt tgcacaaccc gctggaaatc
    10621 gaagtggcac gccgcaatac cgcgtctgat caggtgaccc agcacgttca ctttgtcgat
    10681 aagaaacgca aacgcgaatt gctgtcgcac atgattggta aagggaactg gcagcaggtg
    10741 ctggtgttta cccgtaccaa acacggcgct aaccatctgg ctgagcagct caataaagat
    10801 ggcatccgta gtgcggcgat ccacgggaat aaatcgcaag gtgcgcgtac ccgtgcgctg
    10861 gctgatttta aatcgggtga cattcgcgta ctggtggcga ccgatatcgc tgcgcgcggt
    10921 ctggatatcg aagagttgcc gcacgtcgtc aactatgaac tgccaaacgt accggaagat
    10981 tatgtccacc gtatcgggcg taccggtcgt gcggctgcta ccggtgaagc gttgtcgctg
    11041 gtgtgtgttg atgaacacaa actgctgcgt gatatcgaaa aactgctgaa aaaagagatc
    11101 ccgcgcattg cgattccggg ctatgagccg gacccgtcaa tcaaagccga accgatccag
    11161 aacggtcgcc agcaacgtgg cggcggcggt cgtgggcaag gtggtggtcg cggtcaacag
    11221 caaccacgcc gtggggaagg tggcgcaaaa tctgcaagcg cgaaacctgc agaaaaaccg
    11281 tctcgccgcc tcggcgatgc caaaccggca ggcgaacaac aacgtcgccg ccgtccgcgt
    11341 aaacctgctg ctgcgcagta atctttaatg ccgggctatg cccggcatca ggctgatgaa
    11401 caaacgcaaa actgcctgat gcgctacgct tatcaggcct acgtgaactc tgcaatatat
    11461 tgaatttgca tacttttgta ggccggataa ggcgtttacg ccgcatccgg catttcacaa
    11521 caagcacttg tcagcaattt gagaacacgg gaaaaaattt atctgtttta ccgcccataa
    11581 gccaccgaga cgttacttct ctatagccaa ttgttcgcgc aactccatta aaaggtagcc
    11641 cagtcgattc ttgcccttac cattaccacc gtctccccag taagcatcgt tttccgtatg
    11701 ctcaaccagt tttgcgggcg cggttgccag caagagcgca cgcagttctg gatgctgttc
    11761 gaatttagcg cgaagtgctt ttcgcatcac ctgttctttg accgactccc agtttttacg
    11821 cagaggctta gaacgatcgc gccccatgcg tgcggcgacc ataggggaag aaacccgacg
    11881 gatctcttcg cggtattttt catcaaggaa tttttgtgcc tgaaaatagt gttctgaggt
    11941 gggccaggtt ttcccgtcaa ccttgatggg ccaggcggca aagttagaaa aatcaccgta
    12001 gtcatcgctg gtgctgtaga aatttatgat ggtgtcttgc atgacgtgtt ggatcctttg
    12061 tgctcgaacg ggcattaaac cgcattatgt tggtggttat tgcgagccgc tttccagaaa
    12121 cagaaaaacc attacccctg aaaaccgaaa aatgccacaa tattggctgt ttatacagta
    12181 tttcaggttt tctcatggca ttaaccgccg cgcttaaagc gcaaattgcc gcctggtata
    12241 aggcgcttca ggaacagatc cccgacttta ttccccgtgc gccgcagcgg cagatgattg
    12301 cggacgtcgc caaaacgctg gccggagaag aagggcggca tctggcgatt gaagccccca
    12361 ccggcgttgg gaaaacgctc tcttatttga ttcccggcat cgccattgcc cgcgaagagc
    12421 aaaaaacgct ggtggtgagt accgccaacg tggcgttgca ggatcagatt tacagcaaag
    12481 atttaccgct gctgaaaaag atcattcccg atcttaaatt cactgccgct tttgggcgtg
    12541 ggcgctacgt ttgcccgcgt aatctgacgg cgctcgccag cactgagccc acgcaacagg
    12601 atctgctggc gtttcttgac gacgaactga cgccaaataa tcaggaagag caaaaacgtt
    12661 gtgcgaagct gaagggcgat ctcgacactt ataaatggga tggtctgcgc gatcatactg
    12721 atatcgctat agatgacgat ctctggcgtc gtttaagtac cgacaaagcc agctgcctca
    12781 accgcaactg ttactactat cgtgaatgcc cgttttttgt tgctcgtcgg gagattcagg
    12841 aagcggaagt ggtggtggca aaccatgcgc tggtgatggc ggcgatggaa agcgaagccg
    12901 tactacctga cccgaaaaat ctgctgctgg tgctggacga aggtcatcac ctgccagatg
    12961 tggcccggga tgcgctggag atgagtgccg aaatcaccgc gccctggtat cgactacagc
    13021 tggacttgtt cacgaaactg gtcgctacct gcatggagca gtttcgcccg aagactatcc
    13081 caccgctggc gatccctgaa cgtttgaatg cgcattgtga agagttgtat gagcttatcg
    13141 cctcgttaaa caacattctc aatctctaca tgcctgccgg gcaggaggca gagcaccgtt
    13201 ttgcgatggg cgaactgcct gatgaagtgc tggagatctg ccagcggctg gcaaaactca
    13261 ccgagatgct gcgtggtctg gcggagttat ttcttaacga tttaagtgag aaaaccggca
    13321 gccacgatat tgtgcgtctg catcggttga ttttgcagat gaaccgcgcg ttggggatgt
    13381 tcgaggcgca aagcaaactc tggcggctgg cgtctctggc gcaatcttcc ggtgcgccgg
    13441 tgaccaaatg ggcgacgcgg gaagagcgcg aagggcagct gcatctctgg tttcactgcg
    13501 tggggatacg tgtcagcgat cagctggaaa ggctgctgtg gcgcagtatt ccgcacatta
    13561 ttgtcacctc cgcaaccttg cgttcgctga acagtttttc gcgtttgcag gagatgagcg
    13621 ggctgaaaga gaaagcgggc gaccgttttg tggcgctgga ttcccccttt aaccactgcg
    13681 aacagggcaa aattgttatt ccccggatgc gctttgagcc ttccatcgac aacgaagagc
    13741 agcatattgc cgaaatggcg gcctttttcc gtgagcaggt ggagagcaaa aaacatctcg
    13801 gtatgttggt actgtttgcc agcggacggg cgatgcagcg ctttctcgac tatgtgacgg
    13861 atttacgcct gatgctgctg gtgcagggcg atcagccgcg ttatcgctta gttgaactgc
    13921 accgcaaacg cgttgccaac ggtgagcgta gcgtgctggt gggcttacag tcatttgccg
    13981 aagggcttga tttgaaaggt gatctgctca gccaggtgca tatccacaaa atcgcttttc
    14041 cgcccatcga cagccccgtg gtgatcaccg aaggggaatg gctgaaaagc ctcaaccgct
    14101 atccgtttga ggtgcaaagc ctgccgagcg cctcgtttaa cctgattcag caggttgggc
    14161 gactgattcg aagccacggt tgctggggcg aagtggttat ctacgacaaa cgcttgctga
    14221 ccaaaaatta tggcaagcga ctactggatg cattaccggt atttccgata gagcaaccgg
    14281 aagtccctga aggtatagtt aaaaagaaag aaaaaacgaa atccccacgc cgtcggcggc
    14341 gttaatgatg tgagtcaggt aaggagtcgt aaatggacta tcgcaaaatc attaaagaga
    14401 tcgggcgcgg gaaaaaccac gcgcgcgatt tagaccggga tactgcgcgc ggtctgtatg
    14461 ctcatatgct caatggtgaa gtccctgacc ttgagttggg cggcgtattg attgcgctgc
    14521 gtatcaaagg ggaaggggaa gcagagatgc tcggctttta cgaagccatg caaaatcaca
    14581 ccatcaagct gacgccgcct gcagacaagc cgatgccgat tgtcatcccc agttacaacg
    14641 gcgcgcgtaa acaggccaac ctgacgccgt tgttggcgat tctcctgcac aaactcggtt
    14701 ttcctgtggt ggttcacggg gttagcgaag atccaacccg cgtgctgaca gaaaccattt
    14761 tcgaactgat gggtattacg ccaacgttgc acggcggaca ggcgcaggcg aagctcgacg
    14821 aacatcaacc ggtgtttatg ccagtcggcg cgttttgccc gccgctggaa aaacaactgg
    14881 cgatgcgctg gcggatgggc gtgcgtaaca gtgcacatac cctggcgaaa ctggcgacgc
    14941 catttgccga aggtgaggca ctgcgtcttt ccagcgtttc gcatccggaa tacatcgggc
    15001 gagtcgcgaa gttctttagc gatatcggcg ggcgggcgtt actaatgcat ggtactgaag
    15061 gcgaagtgta tgccaatccg cagcgctgcc cgcagatcaa tctcattgac cgtgaaggga
    15121 tgcgggtgct gtatgaaaaa caggaccctg ctggtagcga gttattgcca caagcaaaag
    15181 atccggaaac cacggcgcag tggattgagc gttgcctggc tggcagcgaa ccgattcccg
    15241 aatcgctgaa aatccagatg gcttgctgcc tggtggctac gggtgaagcg gcaactatca
    15301 gcgatggcct ggcgcgcgtt aatcaggcat tttaattttt atctcagccg gatgaaccac
    15361 gtcatccggc ttttacccca ccgcaatatg aaattcctgc atctttattg accttcccgc
    15421 gcccggcgtg cagcataaaa aaacaacaaa cacataacat aaacaggagt taaccatgga
    15481 aagtggtcat tgctttgatg ctcagacgct gcacagtttt attcaggctg tatttcgtca
    15541 gatgggtagc gaggaacaag aagcgaaatt agttgccgat catttaatcg cggcaaacct
    15601 ggcagggcat gattctcatg gtattggcat gatcccaagc tatgtgcgtt cctggagtca
    15661 ggggcacctg caaattaacc atcatgccaa aatcgttaaa gaggcggggg cggcggtcac
    15721 gctcgatggc gatcgcgcat ttggtcaggt cgcggcacac gaagcgatgg cgctggggat
    15781 tgagaaagcg catcagcacg gtattgctgc cgtggcgcta cataactcgc atcatatcgg
    15841 ccgtatcggt tactgggcag aacagtgcgc agcggcgggg tttgtctcta tccactttgt
    15901 tagcgtggtc ggtattccaa tggtcgcgcc gttccacggt cgcgacagcc gctttggcac
    15961 caatcccttc tgtgtggttt tccctcgtaa agataatttc ccgctgttgc ttgattacgc
    16021 caccagcgcc attgcatttg gcaaaacccg cgtcgcctgg cataaaggcg tccccgtgcc
    16081 gccaggttgc ctgattgacg ttaacggcgt gccgacgacc aatccggcgg taatgcagga
    16141 gtcgccgttg ggttcgctgt tgacctttgc tgaacataaa ggctacgccc tttcagcgat
    16201 gtgtgaaatt cttggcgggg cgctttccgg cggtaaaacg acgcatcagg aaacgttaca
    16261 aaccagtccc gatgccattc ttaactgcat gaccactatc atcatcaacc cggaactgtt
    16321 cggcgcgccg gattgtaacg cgcagaccga agcctttgcc gagtgggtga aagcctcgcc
    16381 gcatgatgac gataagccga ttttgctacc gggcgagtgg gaagtgaaca cgcgtcgcga
    16441 acggcaggag caggggattc cactggatgc gggaagctgg caggccattt gtgatgcggc
    16501 gcggcagatt ggtatgtcgg aagagacgtt gcaggctttc tgtcagcagt tagccagcta
    16561 aaaaaagccc gtccagtaac ggacgggcaa acaagggtaa tataggatca atgagggtta
    16621 gagcatatgc gtctgtcggc aaacagacag ggaaatactt gtgctggacg tagcgtaacc
    16681 gcctgatccg tccaacggtt cggatt
//
LOCUS       DAPGWB010000097        16571 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.098, whole genome shotgun sequence.
ACCESSION   DAPGWB010000097 DAPGWB010000000
VERSION     DAPGWB010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 16571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16571
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.098"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(77..229)
                     /locus_tag="RHX79_003039"
     CDS             complement(77..229)
                     /locus_tag="RHX79_003039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HDV2198185.1"
                     /translation="MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVL
                     AYESKK"
     gene            complement(494..1228)
                     /gene="cysH"
                     /locus_tag="RHX79_003040"
     CDS             complement(494..1228)
                     /gene="cysH"
                     /locus_tag="RHX79_003040"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HDV2198186.1"
                     /translation="MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNL
                     PGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLK
                     VYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ
                     SGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTT
                     RKWEPGMSEEETRFFGLKRECGLHEG"
     gene            complement(1302..3014)
                     /gene="cysI"
                     /locus_tag="RHX79_003041"
     CDS             complement(1302..3014)
                     /gene="cysI"
                     /locus_tag="RHX79_003041"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HDV2198187.1"
                     /translation="MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGF
                     KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKF
                     AGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
                     PYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
                     TVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGY
                     LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPI
                     RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRI
                     TANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERF
                     LPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGN
                     RIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
                     DLWD"
     gene            complement(3014..4813)
                     /gene="cysJ"
                     /locus_tag="RHX79_003042"
     CDS             complement(3014..4813)
                     /gene="cysJ"
                     /locus_tag="RHX79_003042"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     flavoprotein subunit"
                     /protein_id="HDV2198188.1"
                     /translation="MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVL
                     NQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLTAKLNVKLVNAGDYK
                     FKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF
                     FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSV
                     ATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDAL
                     GVWYQNDPALVKELVELLWLTGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYAT
                     LTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIAS
                     SQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGELRVFIEHNDNFRLPAN
                     PETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKE
                     GVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQAL
                     LEVIAEFGGMDTEAADEFLSELRVERRYQRDVY"
     gene            5132..5494
                     /gene="queD"
                     /locus_tag="RHX79_003043"
     CDS             5132..5494
                     /gene="queD"
                     /locus_tag="RHX79_003043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708563.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDV2198189.1"
                     /translation="MSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEV
                     DPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLL
                     SAVMVKETCTAGCIYRGE"
     gene            5572..6843
                     /locus_tag="RHX79_003044"
     CDS             5572..6843
                     /locus_tag="RHX79_003044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDV2198190.1"
                     /translation="MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNL
                     SGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRA
                     RFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVL
                     AERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGA
                     FLYTNQQTLSLGIVCPLSSLTQSRVPASELLARFKTHPAVRPLIKNTESLEYGAHLVP
                     EGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHRE
                     PQNLFALYHHNVERSLLWDILQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKP
                     VPPLRQLFWRHLRRHGLWHLAGDVIRSLRCL"
     gene            6834..7094
                     /locus_tag="RHX79_003045"
     CDS             6834..7094
                     /locus_tag="RHX79_003045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HDV2198191.1"
                     /translation="MSVAHNLWRVADAPHIVPADSVERQMVQRLINACPAGLFSLTPE
                     GDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG"
     gene            7111..7686
                     /locus_tag="RHX79_003046"
     CDS             7111..7686
                     /locus_tag="RHX79_003046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HDV2198192.1"
                     /translation="MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTIS
                     NIVKKIKNAGKYAFIHVDLLESASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGF
                     FCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC
                     DEEDARNAINAGVVALSTTNTGVWTLAKKLL"
     gene            complement(7834..8694)
                     /locus_tag="RHX79_003047"
     CDS             complement(7834..8694)
                     /locus_tag="RHX79_003047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HDV2198193.1"
                     /translation="MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQV
                     LDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHW
                     GNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNV
                     TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISG
                     HLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEA
                     LVTNIHADCQ"
     gene            complement(8691..9470)
                     /locus_tag="RHX79_003048"
     CDS             complement(8691..9470)
                     /locus_tag="RHX79_003048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HDV2198194.1"
                     /translation="MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADE
                     QAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPE
                     FVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFI
                     TLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPA
                     MQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP"
     gene            complement(9448..10857)
                     /locus_tag="RHX79_003049"
     CDS             complement(9448..10857)
                     /locus_tag="RHX79_003049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2198195.1"
                     /translation="MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRI
                     AALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWIS
                     DHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFS
                     PRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWG
                     TPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFN
                     SVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHR
                     KFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIR
                     SLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKA
                     LPLVAAGNVGGANEHSVSV"
     gene            complement(10879..12333)
                     /locus_tag="RHX79_003050"
     CDS             complement(10879..12333)
                     /locus_tag="RHX79_003050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDV2198196.1"
                     /translation="MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHG
                     IYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDG
                     SAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRS
                     IGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITE
                     VTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFAHF
                     ADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVA
                     AERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQ
                     NGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWS
                     KLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK"
     gene            complement(12403..13188)
                     /locus_tag="RHX79_003051"
     CDS             complement(12403..13188)
                     /locus_tag="RHX79_003051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417254.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDV2198197.1"
                     /translation="MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGAN
                     IFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAASCERFGTVDILVNNA
                     GICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGG
                     QWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVL
                     DHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR"
     gene            13507..14784
                     /locus_tag="RHX79_003052"
     CDS             13507..14784
                     /locus_tag="RHX79_003052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2198198.1"
                     /translation="MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSN
                     TEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVML
                     CIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFS
                     RFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVL
                     RISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPL
                     GGIITTYSIVKSPTRVIQILSIIGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYAS
                     RGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWL
                     MGMAALGMVIVFTFLLFQKIRTADSAPAMASSK"
     gene            14811..16289
                     /locus_tag="RHX79_003053"
     CDS             14811..16289
                     /locus_tag="RHX79_003053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HDV2198199.1"
                     /translation="MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDAD
                     TAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLIS
                     WQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSED
                     AAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAG
                     LLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSW
                     LRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMI
                     GFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNYFAKHVIITGGGSNSDLFMQIFA
                     DVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRY
                     DAMNKGIFKDLTKHTDVILKKSYEVMHGELGNADSIQSWSNA"
BASE COUNT         3938 a         4363 c         4176 g         4094 t
ORIGIN      
        1 atataaattt taaaaaaggg tgcaggagac caaaccatca caattcagta cgcggggttt
       61 tacccccgcg tggtggctac ttcttcgatt cgtaagcgag aactgcctta aactccatac
      121 cacgttctct gatactcaac tcacacaacg agtcgcctac catcagcgtg aatcccagta
      181 ctgtaaaaca cagcactatg attgccacaa gggcatattt tgtcagcatg tcttgcctcc
      241 ctgcaaagaa gagactaaca ttcgaattgt ttgggttcga acgctggcct caggttgata
      301 gaaatatcgc ctggggcttt tgtccatctg gaacctcgcg aatgcttaac gccagacagc
      361 ctcaagcacc cgacgccatt ctatacctga taattcttcc agcggcgttc acgtttaaaa
      421 tcaggaatac tgctcgcaaa ataaaaacgc ccccatcatt tctgacagag gcgtttaatt
      481 tatccggcaa tatttaccct tcgtgcaatc cacattccct ttttaagcca aagaaacgtg
      541 tttcttcttc cgacatgcca ggttcccatt tacgggttgt atgggtatca ccgaccgata
      601 aatatccttc atcccataat gggtgatatt tcaggccatg tttttgcaga tactgatata
      661 tcgttcggtt atcccagtcg ataatcggca gcactttaaa tacgccacgc tgaattgcca
      721 gcaccggtaa attggcgcgg ctgccggatt gttcgcggcg caggccagca aaccacgttt
      781 gcgcattcag ttctttcagc gcccggttca tcggttcgac tttgttgatg tcattgtact
      841 tttcaatgcc ttcaacgccc tgttcccaca gtttgccgta gcgtgcttcc tgccaggcgg
      901 cgctttcggt agcgcggtac actttcaggt tgagcttgag tttgtccgtt aactcgtcaa
      961 taaagcggta ggtttccggg aacagatagc cggtgtcggt gaggatcacc ggaatatccg
     1021 ggtgaatctg attcaccaga tgcaggctca ccgccgcctg aatgccaaag ctggaagaaa
     1081 gtacatattc accgggcaga ttatccagcg cccaggcaac gcggccttca gcgtccagtt
     1141 tttccagttc ggcgttagtt tctgccagcg ccagaatgcg atctaccttc ggcagttcgt
     1201 tcagggcgtt tagatcgagt ttggacatag attcctcact gtttgccttg cctgatgcga
     1261 cgctcacgcg tcttatcagg cctacaagac cgggctgatg gttaatccca caaatcgcgc
     1321 gccggatcga gcaccgggcg aatgatgccc gcacgcaccg taaagtcgcc gaagccttca
     1381 cccgcttcgc gctctttcgc ccagcgccct atcagttcat caagcgacgc caggatttcc
     1441 ggctcggtga tgttttcttt atacatccgt gggatacgtg tcccaatgcg gttgccgcca
     1501 agatgcaggt tgtagcgacc cggcgcttta cccaccaggc ccacttccgc cagcatcgcg
     1561 cgaccacaac cgttcgggca gcctgttaca cgcatcacga tatgctcatc gctgacacca
     1621 tgtttcgcca ttaaattatc gatgttgtcg ataaaagacg gcaggaaacg ctctgcttcc
     1681 gccatcgcca gcgggcaagt cgggaacgag acgcaggcca tcgagttttc acgctgcggc
     1741 gtgacggcat tcattaaccc gctctctttg gcgatcttct cgatcttcgc tttctcgctt
     1801 tccggtacac cggcgatgat cagattctgg ttcgccgtaa tgcggaaatc gcctttgtgg
     1861 atcttcgcga tctccagcag gccggttttc agcggacgcc ccggataatc aaggatgcga
     1921 ccattttcga taaacagcgt caggtgccag ttatcatcaa tgcccttaac ccagccaata
     1981 cgatcgcctc gtccggtgaa ctcatatgga cggatcggtt caaatttgat ccccgcgcga
     2041 cgctccactt ccgctttaaa cgtctcaacc cccacgcgct ccagcgtgta tttggttttg
     2101 gcatttttac gatcggttcg gttaccccag tcacgctgag ttgtcacgac ggcttcggcc
     2161 accgccagcg tatgctccag cggcagatag ccaaactcgc tcgccgtgcg ggcgtaggtt
     2221 ttcttgttgc cgtgttcgat agaaagccca ccgcccacca gcaggttgaa gcctaccagc
     2281 ttgccgtttt cggcgattgc cacgaagttc atgtcgttgg catgcagatc gatatcgttc
     2341 tgcggcggga tcactaccgt ggttttgaac ttacgcggca ggtaggtctg accaaggatc
     2401 ggttcttcat cagtagtggc gactttttcc tggtcgagcc agatctccgc atacgcgcgg
     2461 gtacgaggca acagatgctc agaaatcttc ttcgcccact cgtacgcttc cgcgtgcagc
     2521 tgcgactcgt aagggttcga ggtgcagagt acgttacggt tcatgtcgtt agctgtcgcc
     2581 agcgcatcaa gaccgaccga gtgcagcatc tggtgcaccg gtttgacgtt ctttttcaga
     2641 atgccgtgga actgaaacgt ctggcggttg gtcaggcgaa tgctgccata gatggtgttt
     2701 tcaccggcaa atttatcgat cgcttgccac tgtttggtgg tgatcacgcc acccggcaga
     2761 cgacagcgca acagcatcgc atggcgcggc tccagcttct gttcagcacg ttcggcgcgg
     2821 atgtcgcggt catcctgctg atacatgccg tggaagcgga tcagcaggaa gttatcgccc
     2881 ttaaagccgc cggtcagacc gtcgtttaaa tcttccgcaa tggtgccgcg caggtagttg
     2941 ctttcaagct tcatgcgctc ggcgtctgtc agtttacctt cgaccactaa aggccctgga
     3001 tgtttttcgc tcattagtag acatctcgct gataacggcg ctctacgcgc agctcactta
     3061 aaaattcatc cgccgcttcg gtgtccatgc caccaaattc ggcaatcact tccagaagtg
     3121 cctgctcaac gtctttcgcc atgcgattag cgtcaccgca gacataaata tgggcaccgt
     3181 cattgatcca gcgccacagc tccgcgccct gttcgcgcag tttgtcttgt acgtaaactt
     3241 tttctttttg gtcgcgcgac caggcgagat cgatccgcgt cagcacaccc tctttgacgt
     3301 agcgctgcca ctccacctgg tagaggaaat cttccgtaaa gtgcgggttg ccaaagaaca
     3361 gccagttttt acccggtgct tcgtcggcag cacgttgctg cataaaggcg cggaacggcg
     3421 cgatgccggt gcctgggcca atcataatca ccggggtttc cgggttagcg ggcaggcgga
     3481 agttatcgtt atgttcgata aatacgcgga gttcgccctc ttcttccacg cggtccgcga
     3541 ggaagctgga ggcaccaccg gcacgggcgc ggccttccac gtcgtaacgc accacaccaa
     3601 cggtgacgtg tacttcgttc tcgacttccg cctgcgagga ggcgatggaa tacagacgcg
     3661 gcgtcagcgg gcgcagcaga ttaattagcg cttcggcatc aagctgtgcc ggggagaaac
     3721 gcaccatgtc aacaatcggc gtcgtcgcgg cgtaatgctg taacttcgct ttatcgccca
     3781 ccagcggcag cagtgtttca ctgcgggtaa gcgtggcgta attctcaaca atgttggcgg
     3841 tgttgacggt cagttcgaag tgccactgta gcgcttcgtt cagaggcaac gttttgccct
     3901 cgacggtgac aggttcatcg cctgtcagcc acagcagttc gacaagttct ttcaccagtg
     3961 ccggatcgtt ctgataccag acgcccagcg cgtcacccgg ctggtaacgc aggcccgagt
     4021 cacctaagtc aatttcgata tggcgaacgt ctttttcaga gttacgcccg gtaattttct
     4081 ggttaacaga gaggctagcc accagtggcg cgtctttgct gtacgggctg gtgtggattt
     4141 catttaccgc gccagtagcg acggattgcg aaggtgccgc gacaggcgca cgcgatttaa
     4201 gcgcatcaac cacgcgggcg cgccactcgc tggcagcagc ctggtattca acatcggcat
     4261 cgacacggtc gagcaggcgt tcaccgccca gttccgccag cttgctgtcg aaatctttcc
     4321 cggactggca gaaaaattca taagagctat cgccgaggct aaacacggca aacgcggtgt
     4381 tttccagctt tggcgctttt ttggagaaca ggaacttatg cagcgcgacg gcttcttccg
     4441 gcggttcccc ttccccttgc gttgacgtca ccacgataag cagtttttcg ctggcgattt
     4501 gtttgaattt atagtcgccc gcgttcacca gcttaacgtt cagttttgcc gtcaataaat
     4561 catcgcgtaa tgcttcagca acccggcgcg cattgccggt ttgcgaagca gagataatag
     4621 ttatacccgg catttctgcg gctggcgctg gcgtcgctgc aagcgcagca ggctgctgat
     4681 tgagcacgcc ccagaaatag ccagaaaccc aggcaagctg ggtgggagtt aaatcggtcg
     4741 tggccgcctg aaggcgtgcc agttgctccg ggttcaacgg aagcaacgcg gaaggtggga
     4801 cctgtgtcgt catgcgtcgt tatgttccag taagcaaagc tgtttctgcg ccctgtcagc
     4861 gcccataaaa cagaagagaa ggtaaggtta acggggcaaa tggtgtggat taaagacggg
     4921 atagcgataa ctaataacca aatcgactaa cctgttttag caatagtctt taacaacaaa
     4981 atagattaac caacccaatg aaaaacaaat gaatttagcc aatcattaag ataaatcagc
     5041 gattttgcgc aacaaagtcg ttttagataa tgcgaaaaaa cagcctttcc ggtactctac
     5101 ggcggtttta tcgtcctgta gagaaattat gatgtccacc acgttattta aagatttcac
     5161 cttcgaagcc gctcaccgct taccacacgt cccggaaggg cataaatgtg gtcgcctgca
     5221 cgggcattcc tttatggtgc gactggaaat taccggggaa gtcgatccgc atacgggctg
     5281 gattatcgat ttcgctgaac taaaagcggc gtttaaacca acctacgagc gcctcgatca
     5341 ccattatctc aatgatattc caggtctgga aaacccaacc agcgaggttt tagcaaaatg
     5401 gatttgggat caggttaaac ccgttgtgcc gctgttaagt gcggtgatgg taaaagaaac
     5461 ctgtaccgca ggttgtatct atcgcggcga atgataagag tgtgtcggcg gtcaatttcc
     5521 cttaagtaac gctatgttag ggtgttgtgt tctggatatc tggggcatga catggaagac
     5581 gactgcgaca ttattattat tggtgccggt attgcaggca ccgcttgcgc gttacgctgc
     5641 gcgcgagcgg gtttatccgt tttgttactg gaacgcgctg aaatccccgg cagcaaaaat
     5701 ctttccggcg ggcggttata tacccatgca ctcgcggaac tcctcccgca atttcacctg
     5761 accgcgcctc ttgaacgacg catcactcac gaaagccttt ccctgttaac gccggatggt
     5821 gcaacgacgt tttccagctt acagcccggc ggtgaatcct ggagtgtatt acgtgcacgg
     5881 ttcgatccgt ggctggttgc cgaagccgaa aaagaaggtg tcgaatgcat ccccggtgcg
     5941 acggtggatg cgctgtatga agaaaacggc agggtgtgtg gtgtcatttg tggtgacgat
     6001 attctccgcg cccgttatgt ggtgctggca gaaggtgcca acagcgtcct ggctgaacgt
     6061 cacgggttag tgactcgtcc tgctggcgaa gcgatggcgt tggggatcaa agaagtgctg
     6121 tcgctggaaa catccgctat tgaagaacgt tttcatctgg agaataacga aggcgcagcg
     6181 ttgctgttca gcggcgggat ctgtgatgac ttacccggcg gcgcatttct ttatactaat
     6241 caacaaacgc tctcgttagg gattgtttgc ccactctctt cccttacgca aagtcgtgtt
     6301 ccggcaagcg agctgctggc tcgctttaaa acgcatccgg cagtgcgccc gcttatcaaa
     6361 aacacggaat cactggagta tggtgcgcat ctggtgccag aaggtggctt gcacagtatg
     6421 ccggtgcaat acgccggtaa cggctggctg ctggtgggcg atgcgttgcg cagttgcgtc
     6481 aataccggaa tttccgtgcg cggcatggat atggcgctga ctggcgcaca ggcggcggca
     6541 caaacgctga taagcgcctg ccagcaccgc gagccgcaaa atctgtttgc gctttatcat
     6601 cacaacgtcg agcgcagcct gctatgggat attctacagc gttatcagca tgttccggcg
     6661 cttttgcaac gccctggctg gtatcgggcg tggcctgcgt taatgcagga tatttcccgc
     6721 gatttatggg atcagggtga taaacctgtt ccaccgctgc gccagttatt ctggcgtcat
     6781 ttacgtcgtc atggcctgtg gcatctggcg ggcgatgtta tcaggagtct gcgatgtctg
     6841 tagcccataa tctctggcgc gttgctgatg cgccgcacat tgttccggct gactccgttg
     6901 agcgtcagat ggtacaacgg ttgattaacg cctgtccggc aggtcttttt tcgctcacac
     6961 cggaaggtga cttacgcgtt gattatcacg gctgcctgga gtgtggcacc tgccgtttgc
     7021 tgtgcgacga atccacacta caacagtggc gctatccgcc ttccggattc ggcatcacct
     7081 accgctttgg ataaataata aggataattt atgcccctct tacacctgct ccgccagaat
     7141 ccggtgattg ctgccgttaa agataatgcc agcctgcaac tggctatcga ttctgaatgc
     7201 cagtttattt ccgtgttgta cggcaatatc tgcaccatca gtaatatcgt taaaaagatt
     7261 aagaacgccg ggaaatatgc ttttattcat gttgatttgc tggaaagcgc gtcaaataaa
     7321 gaagtcgtta ttcagttttt gaaactggtg accgaggcgg acggcattat cagtaccaaa
     7381 gcctcaatgt tgaaagcggc aagagcggaa ggttttttct gtattcatcg cctgtttatt
     7441 gttgattcaa tttcgtttca caacattgat aagcaagttg cgcaatcgaa tccggattgt
     7501 attgagatcc tgccaggctg tatgcccaaa gtgctgggct gggtgacaga gaaaatccgc
     7561 caaccgctga ttgccggtgg gctggtgtgc gatgaagaag atgcgcgtaa tgcgattaac
     7621 gcgggtgtcg tggcgctttc caccacgaat accggggtct ggacgttagc gaaaaaatta
     7681 ctttgacggg ataatcgtaa ccaattgaat ttggtttgat ttgtaggccg cacgccacat
     7741 ccgacattca gcgcctgatg cgacgcttga cgcgtcttat caggcctaca agtccccagg
     7801 ccagaaccgt aggcaggatc atccggcaac acgttattgg caatctgcgt gaatgtttgt
     7861 caccagtgcc tccagcacca ctttccagtc atcaaccacg ccaacatctg cctgtgaaaa
     7921 taccgcagcg ctggcgtcat gattaatcgc caccacaaac ttgctattgc gtacgcccgc
     7981 cattaacgct gctgcgccag aagcgccaac aacaatacac acctcaggtg ccagcagatg
     8041 tccggaaata ccaatcactt tttcagcatc aacgccaccg ttcatcactc gcgcccgact
     8101 gtagcccact tcggctccca gcttttctgc cagcatagcg atttcctggt tatctgcctc
     8161 tccgccctgc cccaccacca gcacccgtct ggcctcagct aatgggtcgc gagtaacatt
     8221 tttcagatcc tctgtgctaa ccagccagtc gggaagcgca cccgggacaa tgttcagttg
     8281 ttgcattcca gagggcaacg tggcgttttt cgctgctccc gcctgacgcg ccagggaaag
     8341 gcatagcggg cgtttttctg tttgcagcgt cgccgttagc gcatttcccc agtgggattt
     8401 gcgcacgctt acggttggaa tatctaacga agtcacctgg cagatgcttg caccatgtaa
     8461 acgccaggcc agccgggtcg acagttcatc gccaaacgtt cccggcggaa agagaacaac
     8521 gtccgcaggc gttcgctgcc actgttccac caacgcatcc agcacctgtt ccgccactac
     8581 aggctgaggt tcaatctgcc agtgcgccag ggtacaaccg ctgaaatcct gcgccgccag
     8641 ccagcttgct attgcggcat tctcctgatt tattgtcaca attgcgatat tcatggctgc
     8701 atcctttggc gtaaatagtc ctgccatagc ttttgagctt tttctgctac cgtttgccca
     8761 tcaatcagcg tcgctccgcg tcgttgctct gctcttgcca gttgcagaca ctgcatcgct
     8821 ggcatttcgg cagcaacagt tttacggata atttctgctt tccccgcagc cattcgctgg
     8881 cgcattcccg gtactggcaa ggccacttca ccgcactgac gcacggcaat caccgcaggc
     8941 aagcgaaccc ggcaacaacg caaaccatgt tcagtacgct gttcgagggt gataaacagc
     9001 gcgtcgagag tgaaacgctc cacctgggtg aagcagggcc agcccagcat ttccgccagc
     9061 aaaaatggcg tttgcccatt ctgcccttcg ctgctttggc agccggtaat tatcagatcc
     9121 agcggattct gatgctgcca ttcggcaata tggcgagcga caaattccgg cgcaaagcgc
     9181 agatctgccg ccgtctccag caatacagct tcctcaaacc caagagccat gagatagcgc
     9241 agccagtgca atgcccgttc atcccccatg ctcaacgcgg ttaaagacat cggcgtaccg
     9301 ttttttctct gcgccaacag cagcgcggca gcggcctgtt catcagcacc gagtaaactt
     9361 cgcagtagcg aaatatccgg tccgctttta ccctgagccg ccgcctgcca ctctttttcc
     9421 gccagcattc cggcatccgg ttcggcttta aacgctaaca gaatgttcat tcgcacctcc
     9481 tacatttccc gccgccacca gcgggagggc tttagtttct ggtgcccata gccaggtcac
     9541 aacaaaacca accaacaaca ctgtcgccag gagcaataag gtgacttgca ttccccactg
     9601 cgccagcacc cacggcagca ggccagtact taccgccgcg ccaagtcgac tcatggcggt
     9661 ggcaaaaccg acgcccagcg agcgaatgtc agtaggaaaa ctttccgcag gcaaaatgcc
     9721 caccagatta ctgactgccg aaatggtggt gctgaagaga acaaaaagca gcagcgttaa
     9781 tgaactgccg gaaggcaaac aggccattac taccagcgtt gccgccagca gcaaaaaact
     9841 tcccagcaaa aatttgcgat gtgccagcag gtgcgtcaga actaatccca gcagcgcgcc
     9901 cacaattaac aacgcattaa gcatcaggct ggcagtcagc gcatcttcca gaccaatagt
     9961 ctgggcgata gttggcagcc aggtataaat cacaaaccat gggattacga ggcagacaaa
    10021 gaagacgctg ttaaacgccg tgcgccgcca gtaacgcgaa gagaacaagg ttttgatgtg
    10081 tttatgggtc gccgttacca cttcatcgcc cagtaaaaca tggggaccaa aatagcgatg
    10141 cacgatagcg tgagcttctg caaaacgccc ctggcgcagt agccagcgtg gtgattctgg
    10201 cgttccccag cgtaataacg taatcaacaa cgcgggcaga gctgccgatg ccagtagcca
    10261 gcgccaggcc tccgggtttt cggaaataaa gtgatgtccg gcaatacttg ccagcacata
    10321 gcctacggtc cacaccacgc tgaatgcgcc cagcaaaata ccgcgatggc ggcgcgggga
    10381 aaattcagcc agcaaggtgt gacctactga ataatcgcct cccagaccaa tgccaatcaa
    10441 aatgcgcagt ccaataagat gctctggcgt ggtggcaaaa aattgtaaaa acgaagcaag
    10501 cgtaatcagc aaaaagctga aggtgaagat tttttgccga ccaatatggt cggagatcca
    10561 cccaagaacc aggctgccaa ggaacaaacc aaggagcgcc gagccgccga tcattcccgc
    10621 cataaacggc gtcagttgca tggcgggcgt aagctgaata atggcgtaac caatgacgcc
    10681 gagaacataa ccgtcggtca ggtgtgcgcc gaaagtgagc gcagcaatgc ggcagtgaaa
    10741 acggttaagc ggtaaatcat ccattcgcac cggtgaagtg ttcatcttta ccccttcatt
    10801 gtccggtaat aagaacggct tctcgcctga gaagccgaaa aggcaacgcc ccgtcatcgc
    10861 ggaacgctgc ctgacacatt atttttcaat cggatagata gtacccgtat tcataatgcc
    10921 attaggatcg aactgctttt tcagcccttc cagcaacgcc cacgcgctgc cgtgttccag
    10981 tttgctccag tgaacgcgat gtttaccgat accgtggtgg tgcaccatcg aaccgccgag
    11041 gcgaatggtt tcttcacaga tgatcttgtt gagcggattg tggtacttgt cgatttcctc
    11101 ttccggctta cagtcaacga cgttgtaatc gtagacgaag tacatgttgg tgccgttctg
    11161 atagctatga gaggaatgac cgcccagcat ggtgatgtcg tcggcgtgcg ggaactcagt
    11221 acgaatacgg ttaataacgc tttcgtagat ttcgtggatg cagctccagc agccggacac
    11281 ttcagtggta aagcccatgt tgccggtttt gaggatctgc acacgttcgg cagccacttt
    11341 atccggtccc cagttcaggt tgttaaacca ggtttcgatc agtttgctgt ccacgcgctg
    11401 gcactgcggg tagcgggcaa cgatttccgc aatcccttcg cccgtcgcct tcgcaatgcg
    11461 aggattgcct tcagccataa agatcagcac acatttaccg tcggcaaaat gggcgaagtg
    11521 ttgggtgcca tcttcagcgt catacaaacg agcgatcgac ggacgatacc cttccaccat
    11581 gacttcacgc aggatgttga agccggtttt catgtcttcc aggatatagc cgtagaagag
    11641 gttgttttcc ggggtgaatt taaagatttt cactgttact tcagtgatat agcaaagtgc
    11701 accttcgtta ccgatgatga tgtggcgaat gtccgggcca gccgcgcggc gtggcacgtt
    11761 tttaatgcgt gtgacggtgc catcagccaa tactgcttcc agaccaacga ccatatcttc
    11821 gattgcgccg tagagtgtgg agaactgccc gatactgcgg gttgctacca ggccgcccat
    11881 ctgcgccagc ggctttgact gcggagaatg ccccgtggtg taaccttttt cacgcaacgc
    11941 attttccagc acctccagcg gaacgccaca ttgcgccgtc gcctgcatat tctcaatatc
    12001 aatattaatg atttgattca tggcggagcc gtcgagcacc accgagtttt ccacaacggt
    12061 ttccagccca ccttcagtgg cggaagcgcc ggtacgcggc acaccgttaa ttttgtgcgc
    12121 attcataaaa ttcagcacac gggagacttg ttctgtggaa ccgagtttta cgaccgctgc
    12181 cggaatcggc aaagtataaa taccatgaat atccggaaat ttacgaaaac ggtcaatact
    12241 gttcttcttt aatactgttt catcggtaat tacgcgatct gcaccaacaa tttcctttag
    12301 ttggtcgaca atcgctgcgc gagataaaga catagtaatt ccttcctgat aataaaaatg
    12361 gaataatcat taataagaga aaacagaaac caccgttatg ggttagcgca ctaaataacc
    12421 gccatcaacc actaataaat gcccgttgac ataattcgat gccggacttg cgaggaatac
    12481 ggctgcgccc attaaatcct gagtatcgcc ccaacggttt gccggaatat gatcaagaac
    12541 gcgctgattg gtttctggat tactgcgtgt cgccagcgta atatctgttg cataatagcc
    12601 aggggcgata ccatttacct gaatattata ttgacctagt tcatcacaat aagctttggt
    12661 gaacccggca agagcatgtt tagtggcaga atatgcaggt gaccattgtc cacctaagta
    12721 agagaacaat gaacagatat taataatttt gccgcttttc tgcgggatca taatttttgc
    12781 agcttcatag cttaactcga atgcggcggt caggttcaca tcaatcatcg gatcccagtc
    12841 ggcacgaccg aagtccagca ccttattcag cttacaaata ccggcattgt taaccagaat
    12901 atcaactgta ccgaaacgct cacagctagc agcgataatc ttctgcggcg cgccttctgc
    12961 ggtgatatcc acctgcatga agtccacctc aacaccctgt ttttcaatca tttcctttgt
    13021 ttcgccgtta tctttgacga aactaggaat aaagatattt gcgccagctt tggccaacgc
    13081 catggcaaat gcctggccta aaccgctatt cccaccggta acaattgcgg ttttaccttt
    13141 cagggagaaa aaatccattg agaacgcatt gagagattcg attgacatag ttagctccaa
    13201 tttccgtaag gcaaaaaaaa agaaaggtaa cttcccccgc gagagggaag ttacctttct
    13261 cattatctct ggtaactgta gataattttt agcataacgg cataactgct aatgtgatcg
    13321 taatcacagt gtgatattcg tattgtcaaa tagttttaaa aagcagaagc gtgattactc
    13381 tcacacaaca cctctgcttt ccatgttatt tcttattgca attactagag acctgagaaa
    13441 agtaatccac ctgaaagggc ggcttacttt tctctttttt ttgtctatta caaatgggaa
    13501 tacgatatgc aacacaactc atatcgccgt tggataaccc tcgcgataat tagttttagc
    13561 ggcggcgtta gtttcgacct ggcttattta cgttatattt atcaaattcc catggcgaaa
    13621 tttatgggat tcagcaatac cgagataggt ttaataatga gtacctttgg tattgcggct
    13681 attattcttt atgcccccag cggcgttatt gccgataaat tttcacaccg caaaatgatt
    13741 acttccgcga tgatcattac cggattactg ggtctgttaa tggcaacgta tccaccgctc
    13801 tgggtaatgc tctgtattca ggtcgccttt gcgataacaa cgattttaat gctgtggtcg
    13861 gtgtcgatta aagccgcctc gttgctgggc gatcatagcg agcaagggaa aattatgggc
    13921 tggatggaag ggctgcgcgg cgtcggtgta atgtcgctgg cggtgtttac catgtgggtc
    13981 ttttctcgct ttgcaccgga tgacagcacc agcctgaaaa cggtcattat catctatagt
    14041 gtggtttaca tcttgttggg gattctgtgc tggttttttg ttagcgataa caacaacctg
    14101 cgcagtgcca ataacgaaga aaaacagtca ttccagctta gcgacatcct ggccgttttg
    14161 cgcatcagca ccacctggta ttgcagcatg gtgatttttg gtgtcttcac catctacgcc
    14221 attctgagtt actccaccaa ctatctgacc gaaatgtacg gcatgtcgct ggtggcggcg
    14281 agctacatgg ggattgtgat caacaaaatc ttccgcgcgc tgtgcggccc acttggcggc
    14341 attatcacca cctacagtat agtgaaatcc cctacccgcg tgattcaaat cctttccatc
    14401 atcggtttgc tggcgttgac agccctgctc gtcacgaact ctaacccgca atcggtcgcg
    14461 atggggattg gcctgatttt actgctggga ttcacctgtt acgcctcacg cgggctgtac
    14521 tgggcctgcc ccggcgaagc gagaacaccg tcttacatta tgggcaccac ggtaggtatt
    14581 tgttcggtga ttggattcct gccggatgtc ttcgtttacc cgattatcgg ccactggcaa
    14641 gacaccctgc ccgctgcaga agcctaccgc aatatgtggc tgatgggcat ggcggcgctc
    14701 ggcatggtga ttgtctttac ctttttgctg ttccaaaaaa ttcgtactgc tgatagcgcc
    14761 cccgcaatgg ctagcagcaa gtaagccagg aaaattacag gagaaaaatc atgtcgaaaa
    14821 aatacatcat agggattgat ggcggaagtc agagcacaaa agtggtgatg tacgatctgg
    14881 aaggtaatgt ggtttgcgaa ggtaaaggct tattacagcc gatgcacacg ccagatgccg
    14941 atactgcaga acatcctgac gacgatttat gggcatcatt atgttttgcc ggtcacgatt
    15001 tgatgagtca gtttgccggg aataaagaag atattgtcgg tattggtctg ggatccatcc
    15061 gttgctgccg tgcgttattg aaagccgatg gcacgccagc tgcgccgttg attagctggc
    15121 aggatgcacg cgttacacgc ccttacgaac atacgaatcc tgacgtggcg tatgtcacct
    15181 ctttttcggg ttatctgacg catcgcttaa ccggcgagtt taaagacaat atcgccaact
    15241 attttggtca gtggccggtg gattataaga gctgggcatg gagcgaagat gctgcggtaa
    15301 tggataagtt taatatcccc cgtcatatgc tgtttgatgt gcaaatgcct ggcaccgtcc
    15361 tcggacatat cacaccacaa gccgcactgg cgacacattt cccggcagga ctgccggttg
    15421 tttgtaccac cagtgataaa ccggtagaag ctctgggggc cggattactg gatgatgaaa
    15481 ctgcggtaat ttctcttggc acttacatcg cattgatgat gaacggcaaa gcactgccga
    15541 aagatccggt ggcgtactgg ccgattatgt cttctattcc gcaaacattg ctgtatgaag
    15601 gttacggtat tcgcaaaggt atgtggacgg tgagctggct acgcgacatg ttaggcgagt
    15661 cgttaattca ggatgccaaa gcacaggatc tttcaccgga agatttgctc aacaaaaaag
    15721 cttcttgtgt gccgcctggc tgtaatggtc tgatgacggt gctggactgg ctgaccaacc
    15781 cgtgggaacc ctacaaacgt gggattatga tcggctttga ttccagcatg gattacgcat
    15841 ggatatatcg ttcgatactg gaaagcgtgg cgctgacgct gaagaacaat tacgacaata
    15901 tgtgtaatga aatgaattac tttgcaaagc atgtgatcat tactggcggc ggttcgaaca
    15961 gcgatctgtt tatgcagatt tttgccgacg tgttcaacct tccggcacga cgtaacgcca
    16021 ttaacggttg tgcaagcctg ggggcagcga ttaatacagc ggtaggtctg gggctatacc
    16081 cggattacgc aacggctgtc gataaaatgg ttcgcgtgaa agatatcttt atgcctgttg
    16141 agagcaatgc caaacgctac gacgcgatga ataaaggcat tttcaaagat ttaaccaaac
    16201 acactgatgt gattctgaaa aaatcgtatg aagtgatgca tggggaattg gggaatgcgg
    16261 attcgatcca gagctggtcg aatgcgtgaa tgaggtaggc caggcggaaa actgcccggc
    16321 ctgaacatac ctaaatagtt atccccgctg acgcggggaa cataagttcg acaacttaaa
    16381 aaatgataac aagtccggtt tatccccgct gatgcaggga acataataaa aactttaact
    16441 agttcggttt atccctgttt ttacaaggaa tattaactac actcgatgtc tttagaataa
    16501 aagacaatac gaatcgcact ttatcaattt tcacttaaag tatgaactgg atatctttat
    16561 tcataagaac t
//
LOCUS       DAPGWB010000098        15964 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.099, whole genome shotgun sequence.
ACCESSION   DAPGWB010000098 DAPGWB010000000
VERSION     DAPGWB010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15964
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.099"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            58..1110
                     /locus_tag="RHX79_003054"
     CDS             58..1110
                     /locus_tag="RHX79_003054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001544402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDV2198200.1"
                     /translation="MAVRKLTTGKWLCECYPAGRSGGRVRKQFATKGEALAFERHTME
                     ETEAKPWLGESVDRRTLKDVVELWFKLHGKSLTAGQHVYDKLLLMADALGNPLATDLT
                     SKMFAHYRDKRLTGEIYFSEKWKKGASPVTINLEQSYLSSVFSELSRLGEWSYPNPLE
                     NMRKFTIAEKEMAWLTHEQIVELLADCKRQDPILALVVKICLSTGARWREAVNLTRSQ
                     VTKYRITFVRTKGKKNRSIPISKELYEEIMALDGFNFFTDCYFQFLSVMEKTSIVLPR
                     GQLTHVLRHTFAAHFMMSGGNILALQKILGHHDIKMTMRYAHLAPDHLETALRFNPLA
                     TLPSGDKVAAAVGITP"
     gene            complement(1215..1751)
                     /gene="rcdA"
                     /locus_tag="RHX79_003055"
     CDS             complement(1215..1751)
                     /gene="rcdA"
                     /locus_tag="RHX79_003055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator RcdA"
                     /protein_id="HDV2198201.1"
                     /translation="MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGS
                     MTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDN
                     MELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTD
                     RKPLSREEILRMVERVAG"
     gene            1835..3043
                     /locus_tag="RHX79_003056"
     CDS             1835..3043
                     /locus_tag="RHX79_003056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2198202.1"
                     /translation="MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV
                     SIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTS
                     PLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMA
                     LTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGVPFYRDIQLL
                     LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID
                     RYSRVAVVRASALMGALGIGLIIFIDSAWVAGVSVVLWGLGASLGFPLTISAASDTGP
                     DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPD
                     TKTQTAMENS"
     gene            3043..3858
                     /gene="ybjI"
                     /locus_tag="RHX79_003057"
     CDS             3043..3858
                     /gene="ybjI"
                     /locus_tag="RHX79_003057"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase"
                     /protein_id="HDV2198203.1"
                     /translation="MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVAS
                     GNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEV
                     EIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ
                     VQKALHEAIGDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGN
                     DIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ"
     gene            3944..4228
                     /locus_tag="RHX79_003058"
     CDS             3944..4228
                     /locus_tag="RHX79_003058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198204.1"
                     /translation="MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSV
                     PQAVSVATVPQTVYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH"
     gene            complement(4269..5501)
                     /gene="mdfA"
                     /locus_tag="RHX79_003059"
     CDS             complement(4269..5501)
                     /gene="mdfA"
                     /locus_tag="RHX79_003059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdfA"
                     /protein_id="HDV2198205.1"
                     /translation="MQNKLASGARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVV
                     EQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIITCLAILLA
                     QNIEQFTLLRFLQGISLCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLV
                     GAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGRDYKLVLKN
                     GRFVAGALALGFVSLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLA
                     RLTSRRTVRSLIIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGL
                     VRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGQFNLFNLVNGILWL
                     SLMVIFLKDKQMGNSHEG"
     gene            5786..6382
                     /gene="ybjG"
                     /locus_tag="RHX79_003060"
     CDS             5786..6382
                     /gene="ybjG"
                     /locus_tag="RHX79_003060"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706720.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDV2198206.1"
                     /translation="MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAAV
                     LWLWGFTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFP
                     SDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIG
                     CLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD"
     gene            6440..7198
                     /gene="deoR"
                     /locus_tag="RHX79_003061"
     CDS             6440..7198
                     /gene="deoR"
                     /locus_tag="RHX79_003061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor DeoR"
                     /protein_id="HDV2198207.1"
                     /translation="METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNN
                     HSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGT
                     TTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQT
                     LNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPA
                     RMGDLKRFDIVVSDCCPEDEYVKYAQTQRIKLMY"
     gene            complement(7245..8447)
                     /gene="dacC"
                     /locus_tag="RHX79_003062"
     CDS             complement(7245..8447)
                     /gene="dacC"
                     /locus_tag="RHX79_003062"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HDV2198208.1"
                     /translation="MTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWIL
                     MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGN
                     PALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAK
                     KLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQP
                     NRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEK
                     LLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASY
                     TLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGFFGRMWDFVMMKFH
                     QWFGSWFS"
     gene            8693..9319
                     /gene="gstB"
                     /locus_tag="RHX79_003063"
     CDS             8693..9319
                     /gene="gstB"
                     /locus_tag="RHX79_003063"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308945.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase GstB"
                     /protein_id="HDV2198209.1"
                     /translation="MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADF
                     LAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWA
                     NQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFG
                     VGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS"
     gene            complement(9316..10431)
                     /gene="yliI"
                     /locus_tag="RHX79_003064"
     CDS             complement(9316..10431)
                     /gene="yliI"
                     /locus_tag="RHX79_003064"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose sugar dehydrogenase YliI"
                     /protein_id="HDV2198210.1"
                     /translation="MHRQFFFLVPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLP
                     DNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWL
                     SYSEVGDDGKAGTAVGYGRLSDDLSKVADFRTVFRQMPKLSTGNHFGGRLVFDGKGYL
                     FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQG
                     MAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAG
                     TEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRI
                     LTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSPRN"
     gene            complement(10542..10925)
                     /gene="bssR"
                     /locus_tag="RHX79_003065"
     CDS             complement(10542..10925)
                     /gene="bssR"
                     /locus_tag="RHX79_003065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssR"
                     /protein_id="HDV2198211.1"
                     /translation="MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRD
                     NFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNAD
                     KLENCLMSLTLSIQSLQKHAMLEKA"
     gene            11138..12463
                     /gene="rimO"
                     /locus_tag="RHX79_003066"
     CDS             11138..12463
                     /gene="rimO"
                     /locus_tag="RHX79_003066"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDV2198212.1"
                     /translation="MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD
                     ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG
                     PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP
                     SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS
                     MVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK
                     RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF
                     KYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE
                     EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV"
     gene            complement(12510..13838)
                     /locus_tag="RHX79_003067"
     CDS             complement(12510..13838)
                     /locus_tag="RHX79_003067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDV2198213.1"
                     /translation="MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVID
                     TAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSD
                     ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE
                     RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF
                     AYKKDVYLRVCTLIIFFAALVAVISGTSCLYLVRRVINRGIVEKEAIINNHFERVLDG
                     GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNI
                     NDTFGHLLGDEVLMKVVKILKSQIPVDKGKIYRFGGDEFAVIYTGGTLEELLSILKEI
                     VHFQVGSINLSTSIGVAHSNECTTVERLKMLADERLYKSKKNGRAQISWQ"
     gene            complement(13846..>15964)
                     /locus_tag="RHX79_003068"
     CDS             complement(13846..>15964)
                     /locus_tag="RHX79_003068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CHASE9 sensor domain-containing protein"
                     /protein_id="HDV2198214.1"
                     /translation="TEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVY
                     HQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTL
                     RINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLI
                     IYNSEGNYNIIDSVDTEYIAKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFII
                     IVLLVVYFMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSI
                     AEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVF
                     GVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSS
                     FGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEEN
                     IWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE
                     DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK
                     ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN
                     PDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQA
                     QGYLYQKPMPFSAWDKSGKLVKE"
BASE COUNT         4101 a         4017 c         3743 g         4103 t
ORIGIN      
        1 tacattaaca ctggttatac atacagtaaa aatgctctct actggagggc attttttatg
       61 gcagtacgaa aactcaccac aggaaaatgg ctttgcgaat gttaccccgc cggacgtagt
      121 ggaggtcgtg tgcgtaaaca attcgccacc aaaggcgaag ctctggcttt tgagcgtcac
      181 acgatggaag aaaccgaagc aaagccctgg ctgggtgaat cagtggatcg tcgaacactg
      241 aaagacgtgg ttgaactatg gttcaaacta catggtaaat ctctgactgc tgggcagcat
      301 gtctatgaca aattgctgct gatggctgac gctctgggca atccccttgc aaccgatctc
      361 acatctaaaa tgtttgccca ttatcgagat aaacgactga caggtgagat ctacttcagc
      421 gagaaatgga agaaaggagc cagcccggtc accattaacc tggagcaaag ctatctaagt
      481 agtgttttta gcgaactatc ccgtctgggc gaatggtcgt atccgaaccc actggagaac
      541 atgcgaaaat tcaccatcgc agaaaaagag atggcatggc ttacccatga gcagattgtt
      601 gaattactgg ctgattgcaa acgtcaggac ccaattctgg cactggtagt taagatatgc
      661 ttaagcacag gcgcacgctg gcgagaagcc gtaaatctta ctcgttcaca ggtgaccaaa
      721 taccgaatta cctttgtcag aacgaagggg aagaaaaaca gaagcatccc tatcagtaaa
      781 gagctttacg aagagatcat ggcgcttgat gggttcaatt tcttcacaga ctgctatttt
      841 caatttttat ccgtgatgga aaaaacgtct atcgtgctcc ctcgcggtca actgacacac
      901 gttctgcgcc atacgtttgc ggcgcacttc atgatgtcgg gtggaaacat cctggcctta
      961 caaaaaattc tcggacacca cgatataaaa atgactatgc gttacgcaca tctggcaccg
     1021 gatcatctgg aaacggcgct ccgtttcaat cctctggcaa cgctgccaag tggcgacaaa
     1081 gtggcggcag cggttggcat taccccgtaa taaccaccac tgaccaccaa cctaacttat
     1141 tgtttttaat ctaacttatt gttttcatta acccgtttac ataaatgggt tttttgttat
     1201 ctaaaactta tctactaccc tgcaaccctc tcaaccatcc tcaaaatctc ctcgcgcgat
     1261 agcggcttac ggtcggtgac aaaatgcagc gtcatcccct caataaacgc atcaagcgcg
     1321 cgggcggttc cgggttcaaa ccattgttcg agcgtttgct gactgcgctg catccagttt
     1381 tgcattaccg tttttaatag cggttttcgg ctagccagcg cgtagagctg gtacatcagc
     1441 tccatattat ccggcgttgc aacctgtgag ctgtagatca tatcggtgat agcctggcat
     1501 gcgccttgag catcactaac atcgctaaaa aatgcctgat attgccggga cataatctca
     1561 gtaaaactgc tgaacgcctc cagcaacaac tcatcaattc ctgaaaaata gtaggtcatc
     1621 gatcccaacg gtaccccggc aagggtagca attttgcggt gcgtaacagc atgtattccg
     1681 taaagtttca ccgcctccag cgtggcctgg ataatttttt ctcgccgttg cggatcgtta
     1741 gcgcgacgca tgtcatttcc tctctctgca attgtgtaca aatgtacaca accttgctaa
     1801 tgttgtcttc cctcttctta ttttgacgtg atctatgacc gtaaactctt cacgtaatgc
     1861 attgaaacgc cgaacctggg cgctgtttat gttcttcttt ttgccaggcc tgttaatggc
     1921 gtcctgggca acccgtacgc ctgctatccg cgatattctc tctgtctcga tcgctgaaat
     1981 gggcggtgtt ctctttggtc tgtcgatcgg ttcgatgagc ggtattctct gctcggcgtg
     2041 gttagtgaaa cgctttggca cgcgtaatgt catcctggtc acgatgtcct gcgcattgat
     2101 cgggatgatg atattaagtc tggcactctg gctgacatcg cccctgctct ttgccgttgg
     2161 tctcggcgtc tttggggcaa gttttggttc tgcggaagtg gcgataaacg ttgaaggtgc
     2221 tgccgttgag cgagaaatga ataagacggt tttgccgatg atgcacggtt tttatagcct
     2281 gggcacgctg gcaggcgcag gtgtcgggat ggcactgacg gcctttggcg ttccggcaac
     2341 ggtgcacatt ttattggcgg cgctggtagg tatcgcacct atttatatcg ccattcaggc
     2401 aatccctgac ggtacgggca aaaatgctgc cgatggcacc cagcatggcg aaaaaggcgt
     2461 acctttttat cgcgatatcc agttgctgct gataggtgtt gtggtgctgg cgatggcctt
     2521 tgccgaaggt tctgccaacg actggttacc cttattaatg gttgacggtc acggttttag
     2581 ccctacttcc ggctcgctga tttatgccgg ttttaccctg gggatgaccg ttggacgctt
     2641 caccggcggt tggttcatcg accgttacag tcgcgttgcc gtggttcggg ccagtgcact
     2701 aatgggggcg ttgggtattg ggctgattat ttttatcgat agcgcctggg tcgctggggt
     2761 gtctgttgta ctctggggac tgggtgcctc gctgggcttc ccgctgacca tttctgccgc
     2821 cagcgatacc ggccccgatg caccaacccg cgtcagtgtg gtagcaacga ccggttatct
     2881 ggctttcctc gtcgggccgc cgctgctggg ctatctcggc gaacattatg gattacgtag
     2941 tgcaatgctg gttgtactgg cgctggttat tctcgcggct attgtcgcga aagccgtcgc
     3001 caaacccgat accaaaacgc agacggcgat ggagaatagt tgatgagcat taaattaatt
     3061 gcggtagaca tggatggtac tttcttaagc gatcaaaaaa cctataaccg tgagcggttt
     3121 atggctcagt atcagcaaat gaaagcacaa ggcattcgct ttgtggtcgc cagcgggaat
     3181 caatattatc agttgatctc tttcttccct gaaattgcga atgaaattgc ctttgtggct
     3241 gaaaacggcg gctgggtagt gagtgaaggc aaagatgttt ttaatggcga gctgtcgaag
     3301 gatgccttta ctactgtcgt ggaacatttg ctgacgcgcc cggaagtgga aattattgcc
     3361 tgcggaaaaa atagcgccta tacgctcaaa aaatatgacg atgccatgaa aacggtggcg
     3421 gaaatgtatt atcaccgtct ggaatacgtc gataactttg acaacttaga agatattttc
     3481 tttaagtttg gcctgaatct ttccgatgaa ctgattccac aagtacaaaa agcattacat
     3541 gaggccatcg gcgatattat ggtgccagtc cacaccggca acggcagcat cgatctgatt
     3601 atccccggcg tacataaagc caatggcctt cgccaactgc agaaattatg gggaatagac
     3661 gacagcgaag tggtggtctt tggcgatggc ggtaacgata ttgagatgct gcgtcaggca
     3721 ggctttagtt ttgcaatgga aaatgccggc agcgcggtcg tcgcagcggc aaaataccgg
     3781 gcaggctcca ataaccgtga aggcgtactg gatgtgatcg ataaagtgct taaacacgaa
     3841 gcgccatttg accaataaaa acggcagcac gcccggcaac acaatacctg aatgaaggct
     3901 gcataattcg cggaaattaa cccgctgcat tatttcaggc gaaatgatta tgaaaaattg
     3961 tctactgttg ggcgcgcttt taatgggctt tactggtgtg gcgatggcgc aaagtgtcac
     4021 cgtcgatgtg ccgagtggat acaaagtggt tgtggttcct gattcagtca gcgttccaca
     4081 agcggtcagc gtcgcgactg tgccgcaaac cgtctatgtg gctcctgcgc cagctccggc
     4141 ttaccgcccg catccttatg ttcgccatct tgccagcgta ggtgaaggga tggttatcga
     4201 acaccagatt gacgaccatc accattaatt cgagaatgcc tgatcgcaca aagcaatcag
     4261 gcattttttt acccttcgtg agaatttccc atctgtttat cttttaaaaa gataaccatc
     4321 agcgacagcc acaaaattcc gttgacaagg ttgaagagat taaactgtcc gttgcccccg
     4381 ttcagccagg catgtttgct gatttcaata ccaacggtaa agatcagcat ttgcagcatt
     4441 cccatcgccg cagaaaccgt acctttactc atatcgctgg caaacagggt taatcgcacc
     4501 agtcccgcat tcgccagacc aataccgaaa gcataaatac ttaacccggc agtcatccat
     4561 aaatacgcgt gcgatgagat aaccgttgcc gcagcagcga ccaacagacc aatcataatc
     4621 ggccagccgc ccataattat cagcgaacgt acggtgcggc gcgaggtcaa acgcgctaac
     4681 agcaagttac ccgcaattaa cgccccgaaa ataggcactt gcagcaagcc atattcatag
     4741 ctgctcaact gctcgccggt aatgatgata atcggcgact gggcgatcca cgccagcaat
     4801 ggcaggctaa cgaatcccag cgccagcgcc cccgccacaa agcggccgtt cttcagcacc
     4861 agcttatagt cacgaccgag ttctttcagt gacagtttct cgcctatacg cgtggcggtt
     4921 tcaggcatgg ctcgttgcag accgaaaaag gagatcgctg ccaatgcggc aaacaaaaca
     4981 aacatcccct cccagggcag cacatggatc cacgccgcgc ccaccagcgg accaagtagc
     5041 ggagcaatca gcgccacgtt cgccatcagc gcggtgatct tgatacaaac cgcctcttcg
     5101 aaggattcct gaattgcggc gtatcccaca gcgccaatga aacagaggct tatgccctgc
     5161 aagaagcgca acagggtgaa ttgttcaatg ttttgcgcca gcaatattgc cagacaggtg
     5221 atgataaacc acaccacccc cgccagcatc accggacggc gaccaatacg atccgacagc
     5281 ggccccagga gccattgtaa aaacatcccg cccgccagat atgcggtcat tgaagtagga
     5341 acccaatcaa tgcccgcctg atattgttcc accacggcca acataccggg ttgaatcata
     5401 tcgttgccga tataggttga aaattcgtaa agcaccagac agagagggaa aagtaacgcc
     5461 tgacgtccaa gcctggcacc ggaagctaat ttattttgca tgcaatttct tcgccaataa
     5521 taatcgcgca gagtttaata aaagcacagc taacgagaaa gcgaattttg tagctgaaac
     5581 cacggttaag cacattctta cattattgcg agtatagcta cgctttcttt aagttttatt
     5641 taacctatgc ccgttacaat tacccaccgt aaacaggccg cttgagggaa ataagacgat
     5701 gccgctttac ccagtttaac ctgcacttta ttctcaacga cttgcctgta ttggctccct
     5761 tttaatcact ttgcgtcggg aagttatgct ggaaaatttg aatctctctc tattctctct
     5821 tattaacgcg acgccagact cggctccgtg gatgatctcg ttggcgattt ttattgctaa
     5881 agatttgatt accgtggtac cgctgctggc cgcggtgctt tggttgtggg ggtttacagc
     5941 acaacggcaa ctggtgataa aaatcgctat cgcgctggcg gtcagcctgt ttgtgtcctg
     6001 gacgatggga catctttttc cgcacgaccg accctttgtc gaaaatatcg gctataactt
     6061 cctgcatcat gcggcggatg actcattccc aagcgatcac ggtacggtga ttttcacctt
     6121 tgcactggca tttttatgct ggcatcgcct gtggtccggc tcacttttaa tggtgctggc
     6181 cgtcgtcatt gcctggtcgc gcgtttatct tggcgtccac tggccgctgg atatgctcgg
     6241 tggattgctg gcaggtatga ttggctgcct tagtgcccag attatctggc aagcgatggg
     6301 gcataaactc tatcaacgtc tgcaatcgtg gtatcgcgtc tgttttgcat taccgatccg
     6361 caaaggctgg gtgcgtgact gatctctgct aaaaagtgta gtattgagcg gctcgcttca
     6421 ataactattc agagggatta tggaaacacg tcgcgaagag cgtatcgggc agctgctgca
     6481 agaattaaaa cgcagcgata agttacatct taaagacgcc gccgccctgc ttggggtttc
     6541 ggagatgacg attcgtcgcg atctgaacaa ccacagtgcg cccgtcgttt tgctcggcgg
     6601 ctatattgtt ctggaaccgc gcagtgccag ccattacctg ttaagcgatc aaaaatcccg
     6661 cctggtggaa gaaaaacgcc gggcggcaaa actggctgcg acactggtag aacccgatca
     6721 gaccctcttt tttgactgtg gcaccaccac gccgtggatt attgaagcga ttgataatga
     6781 aatccctttt accgccgttt gttattcgct aaataccttt ctggcgctga aagagaaacc
     6841 ccattgccgc gcatttctgt gcggtggtga atttcacgcc agcaacgcca ttttcaaacc
     6901 catcgatttt cagcaaacgc tgaataattt ttgcccggat atcgcttttt attctgcggc
     6961 gggcgtgcat gtcagtaaag gcgctacctg ttttaatctt gaagagttgc cggtaaaaca
     7021 ctgggccatg tcgatggcgc aaaagcatgt gctggttgtc gaccacagta aatttggcaa
     7081 ggtgcgtccg gcgcgcatgg gtgacctgaa acgctttgat attgtggtga gcgattgttg
     7141 cccggaagat gagtatgtga agtacgcgca gacgcagcgc attaagttga tgtattaatg
     7201 acgtataacc ggatgacgtt tcgcgccatc cggttatcag aagattaaga gaaccagctg
     7261 ccgaaccact gatggaattt catcatcacg aaatcccaca tccgaccaaa gaatccgccc
     7321 tcttccacat tttccatcac gatcagcgga cgctgctcaa tggatttacc gttaagctgg
     7381 aaatcaatgg tcccgacaac ctgacctttt ttcagcggtg cggtaagctg cggttccgtt
     7441 aacgtgtagc tcgccttcag gtttttcagc tgcccacgcg gtatggtcac tgagcccgct
     7501 tcacctgccc caagattcac ttcgctctta tcaccaaacc agacgcgctg agtcacaaag
     7561 gtggcatcag gtttaattgg cgtcacggtt tcaaagaagc ggaaacccca ggtcaataat
     7621 ttctcagact cattaaaacg gatacggtca gttttcgccc ccagcactac ggagattaaa
     7681 cgcatatcgc cctgggtagc cgaagcaacc agattatatc ccgcgcctgc cgtggttcct
     7741 gtcttcatgc catcaacatt cagattgctg ctccacagca gacggttacg gttaggctga
     7801 cgaattttgt tgaaggtgaa ctctttctct ttatgaatgg cgtactcttc cggcacatcg
     7861 tggatcaatg ctttacccag caatgccata tcgcgcgcgg tactgaactg ccccggcgca
     7921 tccagaccgt gcaccgtctg gaaggtagtg ttggtcagac ccagtttttt ggcataacca
     7981 ttcatcaaac caataaatga ctcctggctc ccggcaacgt aatcggccag cgcaatacag
     8041 gcgtcattac cggactggat aatcacacct ttgttcaagt ctgccaccga aacctgatcg
     8101 cccggtttga ggaacattac cgatgaacca cgcagtgccg gatttcccgt cgcccaggca
     8161 tctttaccga ccgtcaccat atcggtgagt ttaatcttat cggccttaag cgcctgccca
     8221 accacatagc tggtcatgat tttagtcagg ctcgcgggat ccagtttctc atccgcgttg
     8281 ccttctgcca gcactttacc gctggcgtaa tccattaaaa tccatgcacg cgcatccacg
     8341 ctcggcgctt caacggtttg ttccgccgcg aatgccgttg gggcaaaaag gaataaaaat
     8401 gcagaacccg ctgcaagacc acgaaggaga gaggagtatt gcgtcataaa tgccacccga
     8461 gtatccattc aaaaaaatac gttatatcgc cgtatgataa gttcggtgat taataacgca
     8521 cacacaaact taaagaaacc gtaagttggt aaagttttta aagtttatgc aatatcctgc
     8581 cgcttcgctg cttctggtgt catttttttg ccagctgttg cttaaaagtt aactttactt
     8641 caccatcgga gtcctgttca gcctgtggct gcctgtcgga aaaggggtga gtatgattac
     8701 gctgtggggt cggaataatt caaccaacgt aaaaaaagta ttgctgacgc tcgaagaact
     8761 ggaactacct tatgagcaaa ttctcgcggg ccgtgagttt gggataaatc acgatgctga
     8821 ttttctggcg atgaacccta acgggctggt gccgttgttg cgtgacgacg aaagtgatct
     8881 cattctttgg gaatcaaacg ccattgtccg ctatctggcg gcacagtacg ggcaaaaacg
     8941 cctgtggatc gactcaccgg cacgtcgtgc ggaagcggaa aaatggatgg actgggcaaa
     9001 ccagacactc agtaatgctc atcgcgggat cctgatggga ttagtcagaa caccacccga
     9061 agagcgcgat caggccgcca ttgatgccag ttgcaaagag tgcgacgccc tgtttgccct
     9121 gctcgatgcg gaactggcaa aagtaaaatg gttctctggc gacgagtttg gtgtgggcga
     9181 tatcgctatc gcaccgttca tctacaattt gtttaacgtt ggcctgacct ggacaccgcg
     9241 tccaaatctg caacgctggt atcagcaact cactgaacgc cccgcagtgc gcaaagtggt
     9301 gatgattccc gttagctaat tgcgtgggct aactttaagt aattccccac tggactcgtc
     9361 ggtgagaacg tataaataac cgtcgggtcc agtgcgaaca tcacgaattc gctgccctct
     9421 gtccgttaaa atacggccat cttctgtcac tttgtcgccg ttgacgctca tcacaatgac
     9481 atctttatct ttcagcgcgc ctataaataa tttttgctgc cactggggga atttatcgct
     9541 gttatagaag gccatgccgc tcacagcggg cgaatctttc cagtaaaaaa caggttgctc
     9601 ggtcccggcg acgatctccc ctttcgcttc cggtatctta aagcctgaat agttgattcc
     9661 ccaggttgcc agcggccagc cgtagttttt gcctttttgc gggatattaa tttcatcacc
     9721 accgcgcggg ccatgttcat tcagccacag tgcattactc cacggattca tcgccattcc
     9781 ttgcggatta cgaatgccat aagaccagat ctcggcgcgc gcaccggatt cctttataaa
     9841 aggattatca tccgggattt cgccctggtc ggtcagacgc accagtttgc cctgtaattt
     9901 atccagatcc tgcgccgtcg ggcgctgatt gttttcgccc agagcaataa aaagataacc
     9961 tttaccgtcg aataccagcc gcccgccaaa atggttgccg gtagacagtt ttggcatctg
    10021 gcggaagacg gtgcggaagt cggccacttt tgagagatca tcacttaagc ggccataacc
    10081 cacagcagtt ccggctttgc catcatcgcc aacttcggaa taacttaacc agatgcggcg
    10141 agactgagca aaatcaggcg ctaaaaccac gtccagcagg ccgccctgcc cgtgcgccca
    10201 aacgtccgga actccggaaa gcggcgcaga taatcctttt cctgcttgcc agtgacgcaa
    10261 ctcgccgccg cgcagagtga ttaacatacc gtgattatcg ggtaaaaagg ccagtgccca
    10321 gggatggtcg agtttgtctt gcagtacttc gacatttacc gttgcaggag ccgcccagag
    10381 agcggaagaa agacaaataa ggggcacaag gaaaaagaat tgtcgatgca taacgcctcc
    10441 ggattgactc tggcttaaag cgtagtcagt ggaggagata acaaattcat ttttacaaaa
    10501 acttaaacat gaagggggag acgctttctc ccccttagtt ttcaggcctt ctcaagcatg
    10561 gcgtgcttct gcaggctctg gatactcagc gttaagctca tcagacaatt ttcaagctta
    10621 tcggcgttga cggtaataac agtcgggcaa tcatggtgcc cactcatcaa acatactgcg
    10681 gctgtcgcta atgcttcttc agcatgatga agagcactcc actcttcctg atccagatga
    10741 agattcaacc gcagcgattt atcgtgcagt tcgcgattca gtttaaaaaa gttatctcgt
    10801 agatgattgc tttcgctgac ggacatgtat ccttttgcct tcctcagttg cacgtatgcg
    10861 gcgaggtcaa cgcgtgcgtc gatcaaccgg ttcagcagat cgattcgctg tctgtcaacg
    10921 aacatacttc gatcctcctc tttccagcct tgttgcaatt aaatagtatg gctatttttt
    10981 gagcaaaatg ctgtccagga tcaattcttc acgccgaatt aacaaaattt acatttcctt
    11041 tgcctccgcc agcgaatgag attgcgatac aaattttatc cagaactctg tagaatccct
    11101 gccctgacct ttcctgtaac tgaatatttt ttaagctatg agcaaagtaa ctccccagcc
    11161 gaaaatcggc tttgtttccc ttggctgtcc gaaaaacctt gttgattcag agcgtattct
    11221 caccgaactc cgcactgaag gttatgacgt ggtaccgagc tatgacgatg cggacatggt
    11281 gatcgtcaac acctgcggct ttattgacag cgcggtacaa gaatcactgg aagccattgg
    11341 tgaagcgttg aatgaaaacg gcaaggttat tgtgaccggt tgtctggggg caaaagaaga
    11401 tcagatccgc gaagtccacc cgaaagtgct ggaaatcacc gggcctcata gctatgagca
    11461 ggttctggag cacgttcatc actacgtgcc aaaaccgaaa cacaacccat tcctgagcct
    11521 ggtgccagaa caaggtgtga aactgacgcc gcgtcattat gcctatctga aaatttctga
    11581 aggctgtaat caccgctgca ccttctgcat tattccgtct atgcgcggcg acctggtgag
    11641 ccgtccgatt ggcgaagtgt taagtgaagc gaaacgtctg gtagatgcgg gcgttaaaga
    11701 gattctggtg atctcgcagg atacttccgc ctatggcgtt gatgttaaac atcgtactgg
    11761 cttccacaac ggcgagccgg taaaaaccag catggtcagc ctgtgcgaac agttatcgaa
    11821 actggggatc tggacacgtc tgcactacgt ttacccttat ccgcatgtgg acgacgtcat
    11881 cccactgatg gcagaaggca aaatcctgcc gtatctggac attccgttgc agcacgccag
    11941 cccgcgcatt ctcaaactga tgaagcgtcc gggttctgta gatcgccaac tggcgcgcat
    12001 caaacagtgg cgcgaaatct gcccggaact gaccctacgc tcaaccttta ttgtcggctt
    12061 ccctggcgag acagaagaag atttccagat gctactcgac ttcctgaaag aagcgcgtct
    12121 ggatcgcgtt ggctgcttta aatacagccc ggttgaaggt gcagacgcca atgccctgcc
    12181 tgaccaggtt ccggaagaag ttaaagaaga acgctggaac cgtttcatgc agctgcagca
    12241 gcagatttcc gccgagcgcc tgcaagagaa agtgggccgt gaaattctgg tgattatcga
    12301 cgaagtggac gaagaaggcg cgattggtcg cagcatggca gatgcaccgg aaatcgacgg
    12361 cgcggtttat ctcaatggtg aaaccaacgt taagccgggt gatatcctgc gtgtgaaagt
    12421 cgagcacgcc gatgagtacg atttgtgggg tagccgggtt taattaattc aggccgggca
    12481 aaatcatttg tccggcctgc gaataatgat tactgccagc taatctgagc cctgccgttt
    12541 ttcttactct tatacagccg ctcatccgcc agcattttca agcgttcgac ggtggtacat
    12601 tcatttgaat gcgctacacc gatactggta cttaaattaa tgcttcccac ctggaaatga
    12661 acgatttctt ttagaatcga tagcaactct tccagcgttc cacccgtata aatcaccgca
    12721 aattcgtcac cgccgaagcg gtagatttta cctttatcta ccgggatctg tgatttaagg
    12781 attttcacca ctttcatcaa cacttcatcg cccagcaaat gaccgaaggt gtcgttaatg
    12841 tttttgaatt tatcgacgtc aaacaggcac aaataaccgc ctttttccgg cagcgctttt
    12901 aaatcttcgt caaaggattt tctgcccatt gctttggtca ggtcgtccag gaacgccgag
    12961 ttatacatac tgtagagttt tttgacatcg gcagccgaaa agaaaagccc gccatccagt
    13021 acgcgttcaa aatggttatt aatgatggct tctttctcca caataccacg attaatcact
    13081 ctgcgtacca gatagaggca actggtaccc gatatcaccg ccaccaatgc ggcaaagaaa
    13141 ataatcaatg tacagacccg caaataaaca tcttttttat acgcaaatac gtacaatccg
    13201 gtcggcaaat aggcgaagtg ctccatcgct tccgaaacgg tgaagatggc gtttttagca
    13261 ttatattcat caccggtcac cggtttaccg ttcttaaata gagagaacat caggttctcg
    13321 ctgtccatcg ccagcgattt tgacagtaaa gaaaaacgct ccagaccaag caaaaatatc
    13381 agactacgat tgtgagttac cggatagagg taatagacga aggttttacc gtcaaaagag
    13441 ataaaccctg tatttttgac atgtcgatac ttcacaacct gcataatatc tgcacaataa
    13501 tttttctcga actcctttac ctgaatacat tcgtcactgg aaatcagata aggaccgaca
    13561 tcgtacaaat aagaggggga aaccgagtcg gcgtaagctg tgcgcaaacc aaccaacagc
    13621 tgttcctccg tgggatttag cgtgttgata agatcaattg ccacgctacg ccgatattca
    13681 gcaatatttg ccaccgcaaa agcagtatca ataacggact gtttcaggct atacacccgt
    13741 tcctttacca tttgagtgta gatcccgcag gcaactgctg aaatcatgat aaaaatcagc
    13801 agactgactg taagtacgaa cttattgatt ctggacatac gtaaactact cttttactaa
    13861 ttttccactt ttatcccagg cggagaatgg catgggtttc tggtacagat acccctgagc
    13921 ctgaacacat cctaatttaa ttaattcgcg cgcaacgtct tcgctctcta cgccttccgc
    13981 aatcaccggg atccggttat agcgtgccag atcgaaaata atgcgcacaa tttttcccgc
    14041 agtaccgaaa atatcgccgg taaattgcga gtccaccttt atgctgtctg gattaatttc
    14101 ataaaaacgt ttcaggtttg acaaaccggt gccaaagtca tcaatcgata tccgtacccc
    14161 ttgtttacgc agttgttcaa tattgagata aaaatgttca ttaattcgct cgatcacggt
    14221 ttcagtgatc tcaacacaga ggctgttcgc cttcaggcca ttttctttca tgatggtggt
    14281 aaaacgctca tgaaagtgcg gttcgtttaa ctgccagggc gaaacattaa tatgcagtaa
    14341 gaaatcatcc ttcagcgacg cacgctgact aaaatgtctg aattcaccca ttgccgtttt
    14401 aataatctga taacccagct cattgataaa cccgatatct tcagcaatgg taatgaactt
    14461 cagcggtgaa atgatccccc gctccgcaga aacccaacgg cacaacgcct ccgcgcccag
    14521 aatggcgcgg gtgttaatat caacgatcgg ttgatagacg aggaatagtt cgccaatttc
    14581 cattgcatgg cgaatattac gcgcaatcca gatattctct tctatttcgt tgagtttcgc
    14641 gtcatcacaa aaaataaact cggagaacat atggtcacgg atactggaaa tcgccagttt
    14701 cagtttttct gcgtaactcc aggcgttttc cccctgcaaa ggttcacaaa tggcagactt
    14761 atggatgcgc agattgcggt agccaaagct gctgtcaaaa tcgtttacca tcgctatttt
    14821 acgggtaaat gtctgtacat tttcccgaca cagaagtaaa tagagatcgg cattgaatgt
    14881 cacgatatcg cagcattgcg catatttctc ggcaattcgc tgacacaatt tcctgacgat
    14941 tttattgcgt tcatcaacac caaacaccgc ttccacggct tccagaccac acagtttgat
    15001 gatccccaca gccagatact gattattgtt ggactcaata atcgccatat ttttaataaa
    15061 accgctttcc tgatcgtaag agatcagtga gagcaattta tttgaccgtt caatttcggc
    15121 atctttcatt tccgcgatcg aatttttgat gctgataatc tctttcgcat cgccttcgcg
    15181 aattttcaga gcctcgattt gatccgttga gtcgggcaaa aacgccagcg tattaaccag
    15241 ctcggtcatt tcagaaaatt gccgacggaa cacacgagtg gtcatgaaat ataccaccag
    15301 caacacgata ataatgaaag caaacggtag ataaaaaagt ttatctgatg cgttcaataa
    15361 attaccgcca ggataataaa aatagatttc gaacaatgca ttatttggca ctgctgatgt
    15421 ctttgcaata tactccgtat cgacagaatc aataatatta taattacctt cgctattata
    15481 aataatcagt ttttcacgag cgagttgatt cttggcaatg atctcatgac cttgtttcaa
    15541 aaatagaact tcatcattag cgctgatttg atcaagatac tcgttcagat accgccagtt
    15601 taaatcgaca tgaattttat ctaccgctaa caaatcgtga tctttgccgt tgatacgtag
    15661 cgtaaaagag atacattttt tacccggacg atcaaagcaa ttgtatgccg gattccagct
    15721 gttgttagag tcatctgaag ccaccgacca cggtcgtttc gatgggttaa aatcggcaaa
    15781 aataacccgc cctgactcgt cgacaagcgg tccatttact tgttcctgat gataaacaac
    15841 gattttatca ttcgccctcc gtgaaaagag ataatattta ttatcatcaa gtaccagtcc
    15901 caccgagtct aaaaatggca tcatttccat tttcagaatc acggcgcgtt gaatctcctc
    15961 tgta
//
LOCUS       DAPGWB010000099        15732 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.100, whole genome shotgun sequence.
ACCESSION   DAPGWB010000099 DAPGWB010000000
VERSION     DAPGWB010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15732
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.100"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            4..885
                     /locus_tag="RHX79_003069"
     CDS             4..885
                     /locus_tag="RHX79_003069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2198215.1"
                     /translation="MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQ
                     LGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNY
                     ILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLE
                     DELVVFAAPTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMEL
                     GNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLS
                     NALRRFLDYCDPANVPR"
     gene            1090..2559
                     /gene="lysP"
                     /locus_tag="RHX79_003070"
     CDS             1090..2559
                     /gene="lysP"
                     /locus_tag="RHX79_003070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-specific permease"
                     /protein_id="HDV2198216.1"
                     /translation="MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATIS
                     QAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY
                     WYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS
                     LIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSF
                     QGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDV
                     KDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR
                     IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS
                     HYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGV
                     AATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK"
     gene            2852..4843
                     /gene="cirA"
                     /locus_tag="RHX79_003071"
     CDS             2852..4843
                     /gene="cirA"
                     /locus_tag="RHX79_003071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catecholate siderophore receptor CirA"
                     /protein_id="HDV2198217.1"
                     /translation="MFRLNPFVRVGLCLSAISCAWPVLAVDDDGETMVVTASSVEQNL
                     KDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLIL
                     VDGKRVNSRNAVFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKI
                     GQKWSGTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNS
                     TTTDTGETPRIEGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLERQN
                     YSVSHNGRWDYGTSELKYYGEKVENKNPGNSSPITSESNTVDGKYTLPLTAINQFLTV
                     GGEWRHDKLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGE
                     HWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPE
                     TSESWELGLYYMGEEGWLEGVESSVTVFRNDVKDRISISRTSDVNAAPGYQNFVGFET
                     GANGRRIPVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGRDVSNGENKPLS
                     DLPFHTANGTLDWKPLALEDWSFYVSGHYTGQKRADSATAKTPGGYTIWNTGAAWQVT
                     KDVKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVDYRF"
     gene            complement(4875..5711)
                     /gene="yeiG"
                     /locus_tag="RHX79_003072"
     CDS             complement(4875..5711)
                     /gene="yeiG"
                     /locus_tag="RHX79_003072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HDV2198218.1"
                     /translation="MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPP
                     VLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDSYDLGQGAGF
                     YLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPG
                     KYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLID
                     QGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYL
                     LK"
     gene            5969..6637
                     /gene="folE"
                     /locus_tag="RHX79_003073"
     CDS             5969..6637
                     /gene="folE"
                     /locus_tag="RHX79_003073"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDV2198219.1"
                     /translation="MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHM
                     TEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTV
                     RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL
                     IALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAV
                     RHHN"
     gene            6654..7811
                     /locus_tag="RHX79_003074"
     CDS             6654..7811
                     /locus_tag="RHX79_003074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 family protein"
                     /protein_id="HDV2198220.1"
                     /translation="MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITP
                     QDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLF
                     WDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRA
                     WTPDASAILYEKYWKLHGGVDAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRS
                     GWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPF
                     QAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDR
                     LELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR"
     gene            7953..8993
                     /gene="galS"
                     /locus_tag="RHX79_003075"
     CDS             7953..8993
                     /gene="galS"
                     /locus_tag="RHX79_003075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708050.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalS"
                     /protein_id="HDV2198221.1"
                     /translation="MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELD
                     YRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAE
                     KERHAIEVLIRQRCNALIVHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDN
                     LSGARMATRMLLNNGHQRIGYLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGT
                     PDMPGGEAAMVELLGRNLQLTAVFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIP
                     IARYTDPQLTTVRYPIASMAKLATELALQGAAGNIDPRASHCFMPTLVRRHSVATRQN
                     AATITNSTNQAM"
     gene            9273..10271
                     /gene="mglB"
                     /locus_tag="RHX79_003076"
     CDS             9273..10271
                     /gene="mglB"
                     /locus_tag="RHX79_003076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDV2198222.1"
                     /translation="MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVR
                     KAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK
                     ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNK
                     DGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAW
                     LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGT
                     VLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK"
     gene            10332..11852
                     /gene="mglA"
                     /locus_tag="RHX79_003077"
     CDS             10332..11852
                     /gene="mglA"
                     /locus_tag="RHX79_003077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020883197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
                     /protein_id="HDV2198223.1"
                     /translation="MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHAL
                     MGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQ
                     RSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEI
                     AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE
                     VTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQ
                     PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKQINNHNANE
                     AINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDS
                     MRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIA
                     ELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL"
     gene            11868..12878
                     /gene="mglC"
                     /locus_tag="RHX79_003078"
     CDS             11868..12878
                     /gene="mglC"
                     /locus_tag="RHX79_003078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HDV2198224.1"
                     /translation="MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN
                     ILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMAT
                     MPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP
                     ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPE
                     AAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGG
                     VSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYAR
                     KK"
     gene            complement(12949..14184)
                     /gene="preA"
                     /locus_tag="RHX79_003079"
     CDS             complement(12949..14184)
                     /gene="preA"
                     /locus_tag="RHX79_003079"
                     /EC_number="1.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HDV2198225.1"
                     /translation="MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGV
                     VFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRQLKEDYPDK
                     VLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYC
                     RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMP
                     IVNGKSSISGYSGKAVKPIALRFIQQMRTHPELCDFPISGIGGIETWEDAAEFLLLGA
                     ATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGLANNNIVPAEDLDRSYI
                     VYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGC
                     IELGEVKFKKGEKEHPVTL"
     gene            complement(14178..15416)
                     /gene="preT"
                     /locus_tag="RHX79_003080"
     CDS             complement(14178..15416)
                     /gene="preT"
                     /locus_tag="RHX79_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreT"
                     /protein_id="HDV2198226.1"
                     /translation="MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDP
                     GKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDTPIDIGRLQ
                     RFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPG
                     GWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVG
                     LSSGSGLPLFEHSDVEIAVDFLQRVRQAQGDISIPQSALIIGGGDVAMDVASTLKVLG
                     CQAVTCVAREELDEFPASEKEFASARELGVSIIDGFTPVAVEGNKVTFKHVRLPGELT
                     MAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAV
                     KTGKEAAEAIHHYLEGACSC"
BASE COUNT         3747 a         3871 c         4117 g         3997 t
ORIGIN      
        1 actatgcaca tcaccctccg gcagttggaa gtttttgcag aagtattgaa aagtggatca
       61 accacccagg cgtcggtgat gctggcgttg tcgcaatcag cagtgagcgc agccttgacc
      121 gacctggaag ggcagcttgg cgtgcaactg tttgatcgcg tggggaaaag actggttgtt
      181 aatgaacacg ggcggctgct ctatccgcgt gcgttggcat tgcttgaaca ggcggttgaa
      241 atcgaacaac tgtttcgcga agacaacggc gcgattcgta tctatgccag tagtaccatc
      301 ggtaactaca ttctgcctgc agttatcgcc cgttatcgcc atgattatcc gcagttgccg
      361 attgaactta gcgttgggaa cagccaggac gtgatgcaag cggtgctgga tttccgcgtt
      421 gatattggtt ttattgaagg accgtgccac agcactgaaa ttatttctga accgtggctg
      481 gaagacgagc tggtggtttt cgccgcgccg acttcgccgt tggcccgtgg tccggtcacc
      541 ttagagcagc tggccgctgc gccgtggatc ctgcgtgaac gcggttccgg cacgcgggag
      601 attgtcgatt atctattgct gtcacattta ccgaagtttg agatggcgat ggaattaggt
      661 aactccgagg caatcaaaca tgcggtgcgt catgggttgg gaattagttg cctgtcgcga
      721 cgggtgattg aagatcaatt gcaggcaggc acattaagtg aagttgcggt ccctctgccg
      781 cgcctgatgc gtacgttgtg gcgtatacat catcggcaaa aacacctttc caacgcgcta
      841 cggcgctttc tggactattg cgatcccgcg aatgtaccgc gttaagttgc tgtacaagaa
      901 catgctggtg ctgtgtcgat ttcgtgacgc agcgccctca gcatgcattc gccagaaaag
      961 agattggctg ctttacttat aatccctggg cgatcatgaa ggtgtcttat aaccgtgtat
     1021 ttctgccgga aggattgcca atcgtctgct acaatcgcgc ctcattttta agatggatag
     1081 catttttgta tggtttccga aactaaaacc acagaagcgc cgggcttacg ccgtgaatta
     1141 aaggcgcgtc acctgacgat gattgccatt ggcggttcca tcggtacagg tctttttgtt
     1201 gcctctggcg caacgatttc tcaggcaggt ccgggcgggg cattgctctc gtatatgctg
     1261 attggcctga tggtttactt cctgatgacc agtctcggtg aactggctgc atatatgccg
     1321 gtttccggtt cgtttgccac ttacggtcag aactatgttg aagaaggctt tggcttcgcg
     1381 ctgggctgga actactggta caactgggcg gtgactatcg ccgttgacct ggttgcagct
     1441 cagctggtca tgagctggtg gttcccggat acaccgggct ggatctggag tgcgttgttc
     1501 ctcggcgtta tcttcctgct gaactacatc tcagttcgtg gctttggtga agcggaatac
     1561 tggttctcac tgatcaaagt cacgacagtt attgtcttta tcatcgttgg cgtgctgatg
     1621 attatcggta tcttcaaagg cgcgcagcct gcgggctgga gcaactggac aatcggcgaa
     1681 gcgccgtttg ctggtggttt tgcggcgatg atcggcgtag ctatgattgt cggcttctct
     1741 ttccagggaa ccgagctgat cggtattgct gcaggcgagt ccgaagatcc ggcgaaaaac
     1801 attccacgcg cggtacgtca ggtgttctgg cgaatcctgt tgttctatgt gttcgcgatc
     1861 ctgattatca gcctgattat tccgtacacc gatccgagcc tgctgcgtaa cgatgttaaa
     1921 gacatcagcg ttagtccgtt caccctggtg ttccagcacg cgggtctgct ctctgcggcg
     1981 gcggtgatga acgcagttat tctgacggcg gtgctgtcag cgggtaactc cggtatgtat
     2041 gcgtctactc gtatgctgta caccctggcg tgtgacggta aagcgccgcg cattttcgct
     2101 aaactgtcgc gtggtggcgt gccgcgtaat gcgctgtatg cgacgacggt gattgccggt
     2161 ctgtgcttcc tgacctccat gtttggcaac cagacggtat acctgtggct gctgaacacc
     2221 tccgggatga cgggttttat cgcctggctg gggattgcca ttagccacta tcgcttccgt
     2281 cgcggttacg tattgcaggg acacgacatt aacgatctgc cgtaccgttc aggtttcttc
     2341 ccactggggc cgatcttcgc attcattctg tgtctgatta tcactttggg ccagaactac
     2401 gaagcgttcc tgaaagatac cattgactgg ggcggcgtag cggcaacgta tattggtatc
     2461 ccgctgttcc tgattatttg gttcggctac aagctgatta aaggaactca cttcgtacgt
     2521 tacagcgaaa tgaagttccc gcagaacgat aagaaataag tttcctccct tccttgctaa
     2581 gccctctcaa ccgagagggc tttttcaatt ccatttccct gacaaatcat gcggatataa
     2641 aatttaacat ttggattgat aattgttatc gtttgcatta tcgttacgcc gcaatcaaaa
     2701 aaggctgaca aatcagaggc tgttccggct ttctgggatg atcacctgca tacaaataag
     2761 tccaccgcga tgctgccgta cgcaagggga cgtgaagaag atgtgagcga taacccattt
     2821 tattttcgta gttacctcat ggagatatgg aatgtttagg ttgaaccctt tcgtacgggt
     2881 cgggctgtgt ttgtccgcta tttcttgtgc atggcctgtg ttagcggtcg atgatgatgg
     2941 cgaaacgatg gttgtcactg catcttccgt tgaacaaaac ctcaaagatg cacccgccag
     3001 tatcagcgtc attacccagg aagacctgca gcgaaaaccg gtacagaatc tgaaggatgt
     3061 cctcaaagaa gtgcctggcg tacaactgac gaacgaaggg gataaccgta agggcgttag
     3121 tattcgtggt ctggacagca gctacaccct gattctcgtc gacggtaaac gcgttaactc
     3181 ccgcaatgcc gtcttccgcc acaatgattt cgatctgaac tggatcccgg tcgattccat
     3241 cgaacgtatt gaagtggttc gtggcccgat gtcgtcgcta tacggctccg atgcgctcgg
     3301 cggtgtagtg aatatcatca ccaaaaaaat cggtcagaaa tggtcgggta ccgttaccgt
     3361 cgataccacc attcaggaac atcgcgatcg cggtgatacc tataacggtc agttctttac
     3421 cagtggacca ttaattgatg gtgtgctggg aatgaaagct tacggcagcc tggcaaaacg
     3481 tgaaaaggat gacccgcaaa actcaacgac caccgatacc ggagaaacgc cgcgtattga
     3541 aggattctcc agccgcgacg gcaatgtcga atttgcctgg acaccgaatc aaaatcacga
     3601 ttttactgcc ggatacggtt tcgaccgtca ggatcgtgat tccgactcgc tggacaaaaa
     3661 ccgcctggaa cgccagaact actccgtcag ccataatggg cgttgggatt acggcaccag
     3721 cgaactgaaa tactacggtg agaaagtcga gaacaaaaac cctggcaaca gcagcccgat
     3781 aacttccgaa agcaatacgg tcgacggcaa atacacgttg ccgctgacgg cgattaatca
     3841 gtttctcacg gttggcggtg aatggcgtca cgacaaactt agcgatgcgg tgaacctgac
     3901 cgggggaacc agctccaaaa cgtctgccag ccagtacgcg ctgtttgtgg aagatgaatg
     3961 gcggatcttc gagccgctgg cgctgacgac cggcgtgcgt atggacgatc acgaaaccta
     4021 cggtgaacac tggagtccgc gtgcctacct ggtttataac gccaccgaca ccgtaacggt
     4081 gaaagggggc tgggcgacgg catttaaagc accttctctg ttgcaactta gccctgactg
     4141 gacgagcaat tcctgccgtg gcgcatgtaa gattgtgggt agcccggatc tgaaaccaga
     4201 aaccagcgaa agttgggagc tggggcttta ctacatgggt gaagaaggct ggctggaagg
     4261 ggttgaatcc agcgttaccg ttttccgtaa cgatgtgaaa gatcgtatca gcatcagccg
     4321 tacgtctgac gtcaacgctg caccgggcta ccaaaacttt gttggttttg agacgggcgc
     4381 taacggacgg cgcataccgg tatttagcta ctacaacgtt aacaaagctc gtattcaggg
     4441 cgtggaaacc gaactgaaaa ttccgttcaa cgatgaatgg aaactgtcga tcaactacac
     4501 ctacaacgat ggtcgtgatg tcagcaacgg cgaaaacaaa ccgctatccg atctgccgtt
     4561 ccatactgct aacggtacgc tggactggaa accgctggcg ctggaagact ggtcattcta
     4621 tgtttctggt cactataccg ggcagaaacg cgccgacagc gcgacggcta aaacaccggg
     4681 cggttatacc atctggaata ccggcgcggc ctggcaggtg actaaagacg tcaaactgcg
     4741 cgcaggcgtg ctgaaccttg gcgacaagga tctcagtcgt gacgactaca gctataacga
     4801 agacggacgt cgttacttta tggcagtgga ttatcgcttc tgatgagaag atgcccggcg
     4861 aaccgggcgg actttcactt cagtaaatac tgcgcatgga agcgcaggtg atcctctata
     4921 aaagaggcga tgaagtagta actgtgatca tatcccggct gaatacgcag cgtcatcggc
     4981 cacgctttct ggcgcgcggc ttctgccagt accgcaggtt gcaactggtc ggcaagaaac
     5041 tgatcattat cgccctgatc gataagcgtc gggatcgcat cctgcgcgtt actggcatac
     5101 atcagcgcgc aactgtccca ttccagccat gcatttttgt cctcacctaa atagctgcta
     5161 aacgctttga ttccccacgg gacgctgcac ggattcacaa ttggcgcaaa ggccgaaacg
     5221 ctggtgtatt tacccggatt tttcagcgcc ataatcagcg caccgtgacc acccattgag
     5281 tgaccgctaa tggcgcagcg gtcgctgaca ttaaattgcg actgaaccag cgccggtaat
     5341 tcatcgcgca gataatcata catccggtaa tgcgtcgccc acggcggttg cgtggcatta
     5401 agataaaagc ctgcgccctg gcctaaatcg tagctatcgt cgttggcaac cttttcgccg
     5461 cgcgggctgg tgtctggcat caccagtaca atccccagtt ctgccgccac gcgctgggca
     5521 cccgccttgg tggtgaagtt ctcgtcattg caggttaatc cggaaagcca gtacagcact
     5581 ggtggcgggg tgtgatcacg agggggtggg agaaagatac tgaacgtcat cgggcagttt
     5641 aaggtactgg agtcgtgtcg ccagcgttgc tgccagcctt caaaacagcg gtgctcttcg
     5701 agcatttcca tgcgtggctc cttgttgtgt tgtttgcaat ttcttcatca taccgtttat
     5761 tcaatgtgct gtgagtaact ttcacttccg tatttgcata acgatgtttt aacatctgct
     5821 gatgaaaggc agcggcaatt acaataatta tcgctgtgaa tactggatta tgtgcgccgc
     5881 ctcacgcaca ataatcaggc tgtaaatcag cttaataact ttgcccccac gcagggcgga
     5941 ggcgtcacac ctgcaggaga aatcataaat gccatcactc agtaaagaag cggccctggt
     6001 tcatgaagcg ttagttgcgc gaggactgga aacaccgctg cgcccgcccg tgcatgaaat
     6061 ggataacgaa acgcgcaaaa gccttattgc tggtcatatg accgaaatca tgcagctgct
     6121 gaatctcgac ctggctgatg acagtttgat ggaaacgccg catcgcatcg ctaaaatgta
     6181 tgtcgatgaa attttctccg gtctggatta cgccaacttc ccgaaaatca ccctcattga
     6241 aaacaaaatg aaggtcgatg aaatggtcac cgtgcgcgat atcactctga ccagtacctg
     6301 tgaacaccat tttgttacca tcgatggcaa agcgacggtg gcttatatcc cgaaagattc
     6361 ggtgatcggt ctgtcaaaaa ttaaccgtat cgtgcagttc tttgcccagc gtccgcaggt
     6421 gcaggaacgt ctgacgcagc aaattcttat tgcgctacaa acgctgctgg gcaccaataa
     6481 cgtggctgtc tcgatcgacg cggtgcatta ctgcgtgaag gcgcgtggca tccgcgatgc
     6541 aaccagtgcc acaacaacga cctctcttgg tggattgttc aaatccagtc agaatacgcg
     6601 ccacgagttt ctgcgcgctg tgcgtcatca caactgatta aaaggcagga accatggagc
     6661 gcaacgtcac gctcgatttt gttcgcggcg tcgccattct ggggatcctg ctattaaaca
     6721 tcagcgcctt tgggctacca aaggcggctt atctcaatcc cgcctggtac ggtgctatta
     6781 cgccgcagga tgcatggacc tgggcatttc ttgatctcat cggccaggtg aaattcctca
     6841 cgctttttgc gctgctgttt ggtgctggac tgcaaatgtt gctgccccgt ggcagacgct
     6901 ggatccagtc gcggttaacg ctgttagtct tattgggctt tattcacggt ttattgttct
     6961 gggacggcga tattctgctg gcttacgggc tggtgggctt aatctgctgg cggctggtgc
     7021 gcgatgcgcc atcggtaaaa agcctgttta ataccggcgt catgctttat ctggtggggc
     7081 ttggcgtttt gctgttattg gggctgattt ccgacagcca gaccagccgc gcctggacgc
     7141 cggatgcatc ggctattttg tatgaaaaat actggaagct tcacggcggc gttgatgcga
     7201 tcagtaatcg tgccgatggt gttggcaaca gtttactggc actgggcgca cagtatggct
     7261 ggcaactggc tgggatgatg ctcattggtg cggcgctgat gcgcagcggc tggctgaaag
     7321 ggcagttcag cttacgtcac tatcgtcgta ctggttttgt gctggtggcg attggggtga
     7381 ccattaacct tcctgccatc gccctgcaat ggcagctgga ctgggcgtat cgctggtgtg
     7441 ccttcttact tcaaatgccg cgggaactga gtgcgccgtt tcaggcgatt ggctatgcgt
     7501 cgctgtttta tggcttctgg ccgcaattaa gccgctttaa gctggtgctg gcaatcgcct
     7561 gcgtcggacg gatggcgctg accaactatc tattgcaaac gctgatttgt accacgcttt
     7621 tttaccacct cggtttgttt atgcattttg accgcctgga gctgctggcg tttgttattc
     7681 cggtatggct ggcgaatatc ctcttctctg ttatctggct gcgttacttc cgccaggggc
     7741 cggtggaatg gctctggcgt cagttaactt tgcgtgctgc cggaccggca atatctaaaa
     7801 catcaagata acgatctgga tcacattcgt taacaaaacg gctgtaaccg tttccattgc
     7861 tgtgactcga ttcacgaagt cctgtattca gtgctgacaa aatagccgcc agcaagcagt
     7921 catttactgc aatctcataa caggtagtga atatgatcac cattcgtgat gtagcgcgtc
     7981 aggctggcgt ctctgtggca acggtttccc gggtgctcaa taacagcacg ctggtcagtg
     8041 ccgacacgcg tgaagcagta atgaaagccg tgagtgagct ggattatcga ccaaatgcca
     8101 atgcccaggc gctggcaact caggttagcg ataccattgg cgtggtggtg atggacgttt
     8161 ctgatgcttt tttcggcgcg ctggtaaaag cggtggatct ggtcgcccag cagcatcaga
     8221 aatacgtgct aatcggcaat agctatcatg aagcggaaaa agagcgtcac gccattgagg
     8281 tgttaattcg ccagcgttgt aatgcgttga ttgttcactc aaaagcattg agtgacgatg
     8341 aactggcgca atttatggat aacattcccg gtatggtgtt aatcaaccgc gttgtgccgg
     8401 ggtacgccca tcgttgcgtt tgcctggata atctcagcgg tgcccgaatg gcgacgcgca
     8461 tgttgctgaa taacggtcat caacgtattg gttatctttc ttccagccac ggcattgaag
     8521 atgacgccat gcgtaaagca ggctggatga gtgcgttgaa agagcaggat attattccgc
     8581 cggaaagctg gattggcact ggtacgccgg acatgccggg cggtgaggcg gcgatggttg
     8641 aactgctggg gcgcaatcta caacttaccg ctgtatttgc ttataacgac aatatggctg
     8701 ctggcgcact gacagcatta aaagataatg gcattgcgat tccgttacat ctctcaatca
     8761 tcggtttcga tgatattccc atcgcccgtt acaccgaccc gcaattaacg accgtgcgtt
     8821 atcccattgc ttcaatggcg aaattagcca ccgaactggc cttgcagggg gcagcaggca
     8881 atattgatcc tcgtgccagc cactgtttta tgccgacgtt agtgcgtcgc cattctgtcg
     8941 caacacgcca gaatgcggcg acgatcacta actcaacaaa tcaggcgatg taaccgcttt
     9001 caatctgtga gtgatttcac agtatcttaa caatgtgata gctatgattg caccgtttta
     9061 acgttgtaac ccgtatgtaa cagtgaataa tcactttcac cgaggtaata gcgtcataac
     9121 aacaattaaa gccgttttct ggagcgttac cgggcatgga agaacgaatt ttaaaaagtg
     9181 agcctcggcg ttcagtaaca cttcattaac tctactgccc cgccgagcat ttatctcaag
     9241 cactaccctg cataagaaaa accggagata ccatgaataa gaaggtgtta accctgtctg
     9301 ctgtgatggc cagcatgtta ttcggtgccg ctgcacacgc tgctgatact cgcattggtg
     9361 taacaatcta taagtacgac gataacttta tgtctgtagt gcgcaaggct attgagcaag
     9421 atgcgaaagc cgcgccagat gttcagctgc tgatgaatga ttctcagaat gaccagtcca
     9481 agcagaacga tcagatcgac gtattgctgg cgaaaggggt gaaggcactg gcaatcaacc
     9541 tggttgaccc ggcagctgcg ggtacggtga ttgagaaagc gcgtgggcaa aacgtgccgg
     9601 tggttttctt caacaaagaa ccgtctcgta aggcgctgga tagctacgac aaagcctact
     9661 acgttggcac tgattccaaa gagtccggca ttattcaggg cgatttgatt gctaaacact
     9721 gggcggcgaa tcagggttgg gatctgaaca aagacggtca gattcaattc gtattgctga
     9781 aaggtgaacc gggccatccg gatgcagaag cacgtaccac ttacgtgatt aaagagctga
     9841 acgacaaagg cattaaaact gaacagttac agttagatac cgctatgtgg gataccgctc
     9901 aggcgaaaga taagatggac gcctggctgt ctggcccgaa cgccaacaaa atcgaagtgg
     9961 ttatcgccaa caacgatgcg atggcaatgg gcgcggtaga agcactgaaa gcacacaaca
    10021 agtccagcat tccggtgttt ggcgtcgatg cgctgccaga agcgctggcg ctggtgaaat
    10081 ccggtgcact ggcgggcaca gtactgaacg atgctaacaa ccaggcgaaa gcgacctttg
    10141 atctggcgaa aaacctggcc gatggcaaag gtgcggctga tggcaccaac tggaaaatcg
    10201 acaacaaagt ggtccgcgta ccttatgttg gcgtagataa agacaacctg gctgaattca
    10261 gcaagaaata agactgattg ggcgcagtcg tttactgcgc ccttattgta tggccaacaa
    10321 ggtaaaatta tatggtcagc tcaacgactc cgtcttccgg ggaatacttg ttggaaatga
    10381 gcggtatcaa caagtctttt cctggtgtta aggcacttga taacgttaat ttaaaagtcc
    10441 ggccacattc tatccatgca ttaatggggg aaaacggcgc aggaaaatcg acattattaa
    10501 aatgcctgtt tggtatttat caaaaagact ccggcaccat tttattccag ggtaaagaga
    10561 tcgatttcca ttctgccaaa gaagcactgg aaaatggtat ttcgatggta caccaggagt
    10621 taaacctggt attacaacgt tcggtgatgg ataacatgtg gctggggcga tatcccacca
    10681 aaggtatgtt tgtcgatcag gacaaaatgt accgtgaaac caaagcgatt tttgatgaac
    10741 tggatattga tatcgatccg cgtgcgcgcg tcggcacatt atccgtttcg caaatgcaga
    10801 tgatcgaaat cgccaaagcg ttttcctata acgcgaaaat agtgattatg gatgaaccga
    10861 cttcttcgtt aaccgaaaaa gaggtcaatc atctgttcac tattattcgt aaattaaaag
    10921 agcgcggctg cggtattgtt tatatctcgc ataaaatgga agaaatcttc cagttatgtg
    10981 atgaagttac cgtattgcgc gacggtcagt ggatcgccac cgaaccgctg gcaggactga
    11041 cgatggacaa gatcatcgcc atgatggttg ggcgttctct taatcagcgt tttcctgaca
    11101 aagaaaacaa gccgggcgaa gtcatcctcg aggtgcgtaa cctaacgtca ctgcgccagc
    11161 cgtcgattcg cgatgtctcg tttgatctgc ataaagggga gatcctcggt attgccgggc
    11221 tggtgggggc gaaacgtacc gatattgttg agacgttatt tggtattcgc gagaaatcgg
    11281 ctggcaccat tacgttgcac ggcaaacaga tcaataacca taatgccaac gaagccataa
    11341 accacggatt tgcactggta actgaggagc gccgctcaac gggaatttat gcctatctgg
    11401 atattggttt taactcgtta atttccaata ttcgcaacta caaaaataaa gttggtttac
    11461 tggataactc gcggatgaaa agcgataccc agtgggtgat tgattcgatg cgggtaaaaa
    11521 cgccgggtca tcggacgcaa attggttcgc tctccggtgg taatcagcaa aaggtgatta
    11581 ttggtcgctg gctactaacg caaccagaaa tattaatgct cgatgaaccg acgcgcggta
    11641 ttgatgtcgg ggcgaagttt gaaatttatc agttaattgc cgaactggcg aagaaaggca
    11701 aggggattat tattatctcc tctgaaatgc ctgagttgtt agggataaca gaccgtattc
    11761 tggtcatgag caatggtctc gtttccggaa ttgtcgatac aaaaacaaca acgcaaaacg
    11821 aaattctgcg tcttgcgtct ttgcaccttt aagattaggg gcttcccatg agtgcgttaa
    11881 ataagaaaag ttttcttact tacctgaaag agggcggtat ttacgtcgtt cttttagttt
    11941 tgctggcgat tattattttc caggacccaa catttttaag tctgttgaac ttaagtaata
    12001 ttctcaccca gtcatcggtg cgtattatta tcgcgctcgg tgtggcaggg ttaattgtca
    12061 cccaggggac cgatctttct gctggtcgtc aggtagggct ggcggcagtg gtggctgcga
    12121 cattattgca gtccatggat aacgccaaca aagtgttccc ggaaatggcg acgatgccga
    12181 ttgcgctggt tattctgatt gtctgtgcca ttggtgcggt gatcggtttg atcaacggtc
    12241 tgattatcgc ttatctcaac gtgacgccgt tcattaccac gctcggcacg atgatcatcg
    12301 tctatggcat caactcgctc tattacgact ttgtcggggc gtcgccaatt tctggttttg
    12361 acagtggctt ctctaccttt gctcagggct ttgtcgcgct ggggagtttc cgtctctctt
    12421 acatcacctt ctacgcgttg attgcggtgg cgttcgtctg ggtgttgtgg aacaaaaccc
    12481 gcttcggtaa gaacattttt gccattggcg gtaacccgga agcggcaaaa gtatctggtg
    12541 tcaacgtcgg cctgaacctg ctgatgatct acgcgttgtc tggcgtgttc tatgcctttg
    12601 gcgggatgtt agaagccgga cgtatcggct ctgccaccaa caacctcggc tttatgtatg
    12661 agctggatgc tatcgcggcg tgcgtggtag gcggtgtatc gttcagcggc ggtgtgggga
    12721 cggtgattgg cgtggtgacc ggggtaatta tttttaccgt catcaactat ggcctgacgt
    12781 atatcggcgt aaacccatac tggcagtaca tcatcaaagg ggcgattatt atcttcgccg
    12841 tagcgctgga ttcactgaaa tacgcgcgta agaagtgatg tgattatgga tattgccgga
    12901 tgcgctgcat ccggcaatcg gtgccaaatg ccggatgcgt ctctggtttt acaacgttac
    12961 cgggtgttct ttctcgcctt tcttaaactt cacttccccg agctcaatac aacccaccgg
    13021 gcagacgtga ccacaaagca gacaacccac acatttctcg gtattacaat gcggtgtgcg
    13081 ggttttctcg ctccattcca tcgcctggtg accgccgtcg taacaggaaa tataacagcg
    13141 tccacagcca acacatttat caagattgat acggggatag acaatataac tgcggtctaa
    13201 atcttccgcc gggacaatat tgttattcgc cagacctacc atctcctgca gcgaatcaaa
    13261 tccctgatcg gcgagataat gcgacaaccc gcttgccata tcttccacta tccgataccc
    13321 gtactgcatg atgccggtgg tcacctgtaa cgttgctgcg ccgagcaata aaaactcagc
    13381 cgcatcctcc caggtttcaa tgccgccgat accgctgatt gggaaatcgc acagttctgg
    13441 atgggtgcgc atctgctgaa tgaagcgcag ggcgatcggt tttaccgctt taccggaata
    13501 tccggaaata ctcgattttc cgttaacgat cggcataccg attttctgat taagatcgat
    13561 attggtgatg gatttaacgg tgttaatcgc cgcaatgcca tctgcgccgc cgcgcttcgc
    13621 cgccagcgcc acttcgcaca tatcaccgat attcggcgtc atcttcgcca gcattggcag
    13681 cgtggaaccc cgtttcactg cccgacaata tttttctacc agctccgggc tttgcccgac
    13741 atcgctaccc atcgcatgag aagtcatttg cggacaggag aagttacact cgatcatatc
    13801 cgcgccagct tcttgcacca ggcgcgccag ctcctcccat tgctgctcat tttcccccat
    13861 gatcgaagcg atcaatactt tgtccgggta atcttccttc agctgacgca gggcggccag
    13921 attctcttcc aacggatgtt cagcaatctg ctccatattt ttgaagccga taaaaccggt
    13981 atcttctttc accagatgat caaaacgcgg cgagacttcg ttggcgataa aaaagccgat
    14041 cgttttaaac accacgccgc cccaacctgt gtcgtaggct ttggcacaca tctcatagca
    14101 gttgcctaca ggcgaagaag agaggcagaa cgggttggga aacttcacgc cgcaaaaagt
    14161 aatcgaaaga tctttcgtta acatgagcaa gctccctcta aatagtgatg aatcgcctcg
    14221 gcggcttctt tcccggtttt cacggcatag accacggttt tgtcaccctc aacaatatcg
    14281 ccagcagcaa agacttgcgg atcgcgggtc tgataatttt gtgttttgat ggtgttacgc
    14341 tgcggctcta actccgcaaa ggcatccagt ctggcatgct gaccgacggc gagaataatt
    14401 ttatctgccg ccatcgtcag ttcgcccggt aaccgtacat gcttaaacgt gactttattg
    14461 ccttccacgg ctactggcgt gaatccatcg atgatcgaaa cgcccagctc ccgggcgctg
    14521 gcaaactctt tttcgcttgc cggaaactca tctaactctt cacgcgctac gcaggttacc
    14581 gcctgacagc cgagaacttt cagcgtgctg gctacgtcca tcgcgacatc accgccgccg
    14641 ataattaatg cgctttgtgg aatgctgata tcgccttgcg cctgtcgtac acgttgcagg
    14701 aagtcgacgg caatctcaac gtcactatgc tcaaacagcg gtagcccgga accgcttgat
    14761 aaccccacgg tgaccagtac cgcgcggttt tctgctttca gctgctcaag ggtgagtgtg
    14821 ttaccgactt cgttgttgca cttaatggtc acgcccattt tttcaatacg ggcgatctct
    14881 gcatccagca ctgattgcgg taaccggaat tgcggaatac cgttacgcaa ccagccaccg
    14941 gggtgcgctt ctttctcata aatcgtgacg tcataaccct ggtttgtcag tgttacactg
    15001 gcctgcaatc cggcaggacc tgcgccaata atcgcgactt tgccgagcgt tttagtaccg
    15061 ggctgataaa tttccatccc agtttgttgt tcaaaatcag taacaaaacg ctgtaagcga
    15121 ccgatatcaa tgggagtatc aacaccggca cgggtacaac cgctttgaca taatttctcc
    15181 gtcgggcaca ctctggcaca aacggcaccg agggcattat tttcgcgaat tgtctcggca
    15241 gcgcctttaa aattacgaaa gtagattgag cgaataaatt tccccggatc ggtctgtgcc
    15301 gggcaagcct gactacaggg agcgtcatga cataataaac agcgagaggc ttctttaatc
    15361 gccagtaaag gcgtaaaagc cggagtgagt tcatccagat aattttgttg cggcatgtga
    15421 tcttccttaa tgctatgagt aattaaggcg aacgctaaat atactcgtca tacttcaagt
    15481 tgcatgtgct gcgtctgcgt tcgctcaccc cagtcactta cttatgtaag ctcctgggga
    15541 ctcactcact tgtcgccttc ctgcaactcg aattatttag agtataaata ttgcgtgctg
    15601 atattaaggc tatgcgcgtg gggaaattta tactgtgaaa ggattcacaa atagctgcgg
    15661 ttcagaatgt tatatccgca gcttattgat tgaagtaata attattctca ataattaaca
    15721 gaaaagagaa aa
//
LOCUS       DAPGWB010000100        15715 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.101, whole genome shotgun sequence.
ACCESSION   DAPGWB010000100 DAPGWB010000000
VERSION     DAPGWB010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15715
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.101"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            90..632
                     /locus_tag="RHX79_003081"
     CDS             90..632
                     /locus_tag="RHX79_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198227.1"
                     /translation="MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTEST
                     GLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGG
                     LQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGK
                     DGNRDNAVADGPYVGVNASF"
     gene            732..1934
                     /locus_tag="RHX79_003082"
     CDS             732..1934
                     /locus_tag="RHX79_003082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide mononucleotide deamidase-related
                     protein YfaY"
                     /protein_id="HDV2198228.1"
                     /translation="MLKVEMLSTGDEVLHGQIVDTNAAWLADFFFHQGLPLSRRNTVG
                     DNLDDLVTILRERSQHADVLIVNGGLGPTSDDLSALAAATAKGEGMVLHEAWLKEMER
                     YFHERGRVMAPSNRKQAELPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVM
                     VEHEILPRLRERFSLPQPPVCLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPII
                     ELKLTGPASEQQAMEKLWLDVKRVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQF
                     TGGLLALQLSRAGAPLLACEVVPSQEETLAQTAHWITERRANHFAGLALAVSGFENEH
                     LNFALATPDGTFALRVRFSTTRYSLAIRQEVCAMMALNMLRRWLNGQDIASEHGWIEV
                     IESMTLSV"
     gene            1989..2459
                     /locus_tag="RHX79_003083"
     CDS             1989..2459
                     /locus_tag="RHX79_003083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001342598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HDV2198229.1"
                     /translation="MSNPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESK
                     TALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAA
                     GFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKAGKNGPRIKGSY"
     gene            complement(2500..3402)
                     /locus_tag="RHX79_003084"
     CDS             complement(2500..3402)
                     /locus_tag="RHX79_003084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HDV2198230.1"
                     /translation="MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQT
                     LRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAA
                     MQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT
                     IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQ
                     CGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLE
                     QGIDRDQVLAATQLSEADLAANNH"
     gene            complement(3596..4786)
                     /gene="glpC"
                     /locus_tag="RHX79_003085"
     CDS             complement(3596..4786)
                     /gene="glpC"
                     /locus_tag="RHX79_003085"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit C"
                     /protein_id="HDV2198231.1"
                     /translation="MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK
                     DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMG
                     SVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYK
                     DQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQ
                     AITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWR
                     KLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAG
                     TYGFKKENYPTSQAIGAPLFRQIEESGADLVITDCETCKWQIEMSTSLRCEHPITLLA
                     QALA"
     gene            complement(4783..6042)
                     /gene="glpB"
                     /locus_tag="RHX79_003086"
     CDS             complement(4783..6042)
                     /gene="glpB"
                     /locus_tag="RHX79_003086"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase subunit GlpB"
                     /protein_id="HDV2198232.1"
                     /translation="MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGS
                     LDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQL
                     QGSVELAHQRVTPLGTLRATWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLR
                     ELDLSVETAEIELPELDVLRNNATEFRAVNIASFLDNEENWPLLLDALIPVANTCEMI
                     LMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPG
                     DEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLD
                     VLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIA
                     QGCGGGVCAVSALHAAQQIAQRAGGQQ"
     gene            complement(6032..7660)
                     /gene="glpA"
                     /locus_tag="RHX79_003087"
     CDS             complement(6032..7660)
                     /gene="glpA"
                     /locus_tag="RHX79_003087"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit A"
                     /protein_id="HDV2198233.1"
                     /translation="MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT
                     GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLS
                     FQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLD
                     AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAE
                     YADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYN
                     EIDDNRVTAEEVDILLREGKKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV
                     LLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEP
                     AEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVEN
                     LNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKG
                     VQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL"
     gene            7933..9291
                     /gene="glpT"
                     /locus_tag="RHX79_003088"
     CDS             7933..9291
                     /gene="glpT"
                     /locus_tag="RHX79_003088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HDV2198234.1"
                     /translation="MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLV
                     RKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL
                     AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSV
                     WNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP
                     PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWS
                     PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI
                     ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG
                     YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRN
                     GG"
     gene            9296..10372
                     /gene="glpQ"
                     /locus_tag="RHX79_003089"
     CDS             9296..10372
                     /gene="glpQ"
                     /locus_tag="RHX79_003089"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDV2198235.1"
                     /translation="MKLKLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLP
                     EHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRY
                     YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNH
                     STGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRI
                     KNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADG
                     IGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTIDVNQLYDAL
                     YNKAGVNGLFTDFPDKAVKFLNKE"
     gene            complement(10414..10653)
                     /locus_tag="RHX79_003090"
                     /pseudo
     CDS             complement(10414..10653)
                     /locus_tag="RHX79_003090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311149.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            10835..11485
                     /gene="inaA"
                     /locus_tag="RHX79_003091"
     CDS             10835..11485
                     /gene="inaA"
                     /locus_tag="RHX79_003091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide kinase InaA"
                     /protein_id="HDV2198236.1"
                     /translation="MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKL
                     YVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALL
                     VTEDMAGFISIADWYAQHAVLPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIY
                     VKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKVDWEQVKAYYYAM"
     gene            complement(11539..11793)
                     /gene="yfaE"
                     /locus_tag="RHX79_003092"
     CDS             complement(11539..11793)
                     /gene="yfaE"
                     /locus_tag="RHX79_003092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like diferric-tyrosyl radical
                     cofactor maintenance protein YfaE"
                     /protein_id="HDV2198237.1"
                     /translation="MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGS
                     CRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM"
     gene            complement(11793..12923)
                     /gene="nrdB"
                     /locus_tag="RHX79_003093"
     CDS             complement(11793..12923)
                     /gene="nrdB"
                     /locus_tag="RHX79_003093"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDV2198238.1"
                     /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ
                     LSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI
                     PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDE
                     LIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFA
                     FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL
                     FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP
                     WINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL"
     gene            complement(13012..15297)
                     /gene="nrdA"
                     /locus_tag="RHX79_003094"
     CDS             complement(13012..15297)
                     /gene="nrdA"
                     /locus_tag="RHX79_003094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDV2198239.1"
                     /translation="MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELR
                     SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL
                     YDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR
                     VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP
                     TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD
                     YGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR
                     VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN
                     DVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAM
                     GRRTLGIGVINFAYYLAKHGVRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP
                     WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET
                     SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV
                     GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED
                     AQDDLVPSIQDDGCESGACKI"
BASE COUNT         3649 a         3888 c         4285 g         3893 t
ORIGIN      
        1 ccttttttcg ctcattgaat cctctgtgcc aggcagtaca atcccgcagc tttgggaatt
       61 ttgattaatt gcttgtggga aaggggataa tgaaaaaaat tgcgctagca ggtctggccg
      121 gaatgctgtt ggtttctgca tcggtcaatg caatgagcat cagcggccag gcgggtaaag
      181 aatacaccaa tattggtgtc ggttttggga ctgaatcgac gggcctggct ttaagcggta
      241 actggacaca taacgacgac gacggtgacg tcgcgggcgt ggggctgggg ttgaatctgc
      301 ctctcgggcc gttaatggcg accgttggcg gaaaaggcgt ttacaccaac ccgaattacg
      361 gcgatgaagg ttatgccgca gcggtaggag gtggtttgca gtggaaaatt ggcaacagct
      421 tccgtttgtt tggcgagtat tactactctc cggattcgct ctccagcggt attcaaagtt
      481 atgaggaagc gaatgctggc gcgcgttaca ccattatgcg tccagtcagt attgaggcgg
      541 gttatcgcta cctgaatctg tcgggtaaag acggtaaccg cgacaacgcc gtggctgacg
      601 gcccgtatgt tggggttaac gccagtttct gatcccttcc ggcgcggcat tctgtcgcgc
      661 cattcagttt cttactacgc cttatctccc tttgcgttat agtgattcga taacaaaagc
      721 aggagataac catgttaaaa gtggaaatgc tatccaccgg ggatgaagtg ttacacgggc
      781 aaatcgttga cactaacgct gcctggctgg ccgatttttt ctttcatcag gggctgccat
      841 tatctcgccg caatacggtg ggggataacc ttgatgactt agtcaccatt cttcgcgaac
      901 gtagtcagca cgccgatgtg ctgatcgtta acggcgggct gggaccgacc agcgatgatt
      961 taagcgcact cgccgctgcg acagcaaaag gtgaaggcat ggtgctgcat gaagcctggc
     1021 tcaaagagat ggaacgctat ttccacgaac gtggacgagt aatggcaccg agcaaccgta
     1081 aacaagcgga gctgcctgcc agtgctgaat ttatcaataa cccggtaggc accgcctgtg
     1141 gttttgccgt gcagcttaat cgttgcctga tgttctttac tcccggcgta ccgtcagaat
     1201 ttaaggtgat ggtcgagcac gaaatcctgc cgcgtctgcg cgagcgtttt tctttaccac
     1261 agccgccggt ttgtctgcgt ttaactacct ttggtcgttc ggaaagcgat ctggcacaaa
     1321 gcctggacac tctacaactg ccgccgggcg tcacaatggg ctatcgctct tcaatgccga
     1381 ttatcgaact gaaactcacc ggaccggcaa gcgagcaaca ggcgatggaa aaactgtggc
     1441 tggacgttaa acgtgttgcc ggacagagcg tgattttcga aggcaccgaa ggactgcccg
     1501 cgcagatcag tcgcgaattg caaaaccgcc agttcagcct gacgttgagc gagcaattca
     1561 ccggtggttt attggctttg caactttctc gcgcaggtgc tccattgctg gcgtgtgaag
     1621 tggttccttc acaggaagaa accctggcgc aaactgcgca ctggattaca gaacggcggg
     1681 ccaaccattt tgccgggctg gcactggctg tttcgggttt cgagaacgaa catctcaact
     1741 ttgcgctagc cacaccagac ggcactttcg ctctgcgtgt gcgtttcagc actacgcgct
     1801 acagcctggc tatccgtcag gaagtgtgcg caatgatggc actgaatatg ctgcgccgtt
     1861 ggttaaacgg ccaggatatc gccagtgagc atggctggat tgaggttatt gagtccatga
     1921 ccttatctgt ctgattccgc cactctgtgc cggtttactg caccggcaca ttccccctcc
     1981 ggcaaaactt gtccaaccct ccctacggtg agcgtggtgt tggggccagt gtggcacggg
     2041 ctgcgcgctg gggacgcatt gagaattaca tggcgcaagt caacgattcg ctttgtctgt
     2101 tagtgcaggt ggaaagtaaa acggcactgg ataacctgga cgagatcctc gacgtcgaag
     2161 ggattgatgg cgtgtttatt ggaccagcgg atctttctgc gtcgttgggc tacccggata
     2221 acgccgggca cccggaagtg cagcgaatta ttgaaaccag cattcggcgg atccgtgctg
     2281 cgggtaaagc ggctggtttt ctggctgtgg ctcctgatat ggcgcagcaa tgcctggcgt
     2341 ggggagcgaa ctttgtcgct gttggcgttg acacgatgct ctacagcgat gccctggatc
     2401 aacgactggc gatgtttaaa gcaggcaaaa atgggccacg cataaaaggt agttattgat
     2461 atcaaaggcc catggggatc ggctgtgggc ctgtgttaat tagtggttat tcgctgccag
     2521 atcggcttcg cttagctggg tggccgcgag cacctggtca cgatcaatgc cctgttccag
     2581 catgcgcaaa gcaattttaa tggcttgttc atgcatacct tcctgccagc caatttgatg
     2641 cccttcctgc cgtagccgtt cagcaatagt cattaatctc tccttttgta gtggtgaacg
     2701 ttcggcaatc tcctcaataa aacgggtgaa acgggaggta tcgccgcatt gcagcagata
     2761 attaaacagt gtttgtagct ggctgtcatt agtgaagcct ctaaccaaaa gcgtggtgat
     2821 cctgtcgacc atgccgatta aatcgcggtc gcgaatatgc ttttgaatca gttccagcag
     2881 agctatacgc cgatgttgca tgatctcatc gtcaggtacg atggtgatat ccaccaacgg
     2941 aaaagcttcg gtgtacaact gccgggcaag ttgcggatcg tcaaactcat ccagccagtt
     3001 aagtgagtac gggtagggcg atgtttcgcc atgataaaac agcaatggca ccaccagcgg
     3061 aactctgtca tagcctttat ccaggtgacg ctgcatggcg gcagtggcat agcgcattag
     3121 ccgaaaagcc atattctttt ctgcagagct ttgatgttca atcacgcagt agatatagcc
     3181 gtcaccgtcg ctggtttcca cggaccacaa aacatccgag tagtaagcgc gtaaactttt
     3241 ttcaataaaa ctagtgggtt ccaggcgtaa ggtttgcagg ttgcaaagct tgcgcagtgg
     3301 ttctggtaaa tgtatttcga gaaaatcccg tgcggtttcg ggtgtgaaca taaaggtttt
     3361 aaacaccgca tcatgcgggg aggatgttgt tgattcggtc atggttgtcc gtcacctgat
     3421 atttatgatg acgcgacatt acgtctatcc cgggcctttg acatctgtca gtttcagcct
     3481 ttgcgagaca tttttagagg aattttcaaa gcgttgcaac gcatacatgg tgcgtggaat
     3541 cgcgctcgca aaaatgcccg ataagcaatg tgcttaccgg gcatcaaaag gtcggttaag
     3601 ccagcgcctg ggccagtagc gtaatcggat gttcgcagcg aaggctcgtg gacatctcaa
     3661 tctgccattt gcaggtttcg cagtcggtga tgaccagatc cgcgccgctc tcttctatct
     3721 ggcggaacag tggcgcaccg atggcttgtg aggtggggta gttctctttt ttgaaaccgt
     3781 aagtacccgc aataccgcag cactgggaat ccagcaccgt taactcaagc cccgggattt
     3841 tacgcaacag ctccagggtg tagagcgtcc agcccatttt ttccatatgg cacggagtgt
     3901 gataaaccac tttcagcggc agcggtttca gcggtaacgt tttgccttcg tccagcttgc
     3961 gccacagcca gcgggttgcc agttcgatat gatcgcgcaa gcctttgttg tcgacattca
     4021 gcacttccgg gtattcgtcg cgcagggcaa atgtacaggt tgaggaggtg gcaatcaccg
     4081 gaatgccttt tactcccaca gcttcgcgga tcgactctac attcgtaatt gcctgtttgc
     4141 gtgctttatc ggtaaagccg ttggcgatta gcggtacgcc gcagcatttt tctttgctga
     4201 gcagttgtac accggtaccc attgcgttga gcactttaat taaatcttta cctaactgcg
     4261 gatggttgta gttaacgaag cagccgtgaa agaaagcgac ctggtcttta tattgtgctt
     4321 gctgagccgc tatgctgcga taccagcgac gaaacgtacc gaaggagtat ttcggtagcg
     4381 tgcggcgatg atcgattttt aacgccgcat caagcagctg ccgcaccggt ttcagcgagg
     4441 tagcggtgtt gacgattggt gcgaacggcg tggaaacgct acccatcagg tcggtatgac
     4501 tcaacacaaa attacgcagc gacgggcgcg tggtgtcata ttttgcccgc gcgcgctgga
     4561 taatatcgcc aatcttcaca tcggacgggc aggcgacttc acaacgtttg cagttgatgc
     4621 aatatttcag cgcctcgtca tacagtgcgc catctttcaa acgcagacgc tcgccatccg
     4681 gcccggcttg ttttggccct ggataaccgg gattcacccg gctcaccggg caggcggtgg
     4741 tgcagacggt gcacttaatg cagttttcga agctggtgtc gttcattgtt ggcctcctgc
     4801 gcgttgggca atctgttgag cggcatgtaa agcactgacg gcacaaacac cgccgccgca
     4861 tccctgggcg atgggatcaa atccgcccag caccgaaccg atggcaaaca ggttctcaat
     4921 ggtttgccct gcctgcgacg ggcgtagcgt ctcatcagtg gttacaccga actgctgcca
     4981 cggttgcggc gcaaaaaaat cgcccttata ccattcaccc cgcgtggcgg tttgtagcac
     5041 atcaaggccg agaatcggct cgcgaatgcc gttacgttcc gctaccagtc cgccactaaa
     5101 gaaactgccg ctggcgagaa ccgcgaaacg tggacgtagc ggaatatcgg cgtgattgcg
     5161 ggtccagatt tcattcacta cgccattttt acaggtcact tttttcactt catcgcccgg
     5221 catccacacg ccaccctggc gcacaaactg gcgctgtaac tggttttgca gacgaatgcc
     5281 cagcacggaa ggcggcagcg ttggcaaaag catcagtgaa caaggtagtt tttcattcaa
     5341 ccaacgccac agtttgtcat cggccaggcc gaagcaggcg ggcatcagga tcatttcgca
     5401 ggtattggcg acaggaataa gcgcatcaag taacagcggc cagttttctt cattatcaag
     5461 gaaactggcg atattcaccg cgcgaaattc ggtggcgtta ttgcgcagga catccagttc
     5521 cggcagctct atttctgcgg tttcaaccga aagatccagt tcgcgcaacg aagccgccgc
     5581 aagatgcgcc tggaaatcca tcagcccgct tatccccact acacatatct tcttcgcggg
     5641 tagcggccag acgggaactt ctggcgaact taaccaggtt gcacgcaaag tgccgagcgg
     5701 ggtaacgcgc tgatgggcca gttccacgct gccctgcaat tgcgcaccgc tttcagcgat
     5761 caatgcctgc gcctggcaag cgagatcgag cacgcgttgt ggttcgagaa gactgtaagg
     5821 atgggctggt gcctgctgac gcaaagattc cagtccactg tgaatgtctg tcaccggttg
     5881 accatcaggc agatggctca gcaaatccag cgaaccggat gagaaatgca gcgcgctttg
     5941 accacgcgtg acaatggcac agcgcaggcc gtgtttttgc agttgcaggc cacagagtaa
     6001 tccggcgagg ccgccgccca taatgacagt atcaaagcgc atctttctgc tccttctcca
     6061 gaccacacag tccctgataa acccagcggg taaattcgct ttcgcgcagt gcgtctcccc
     6121 aggcgatggg ttgcacgcct ttccagcgtt cgttaaggaa ggtggaaagt tgctcgatag
     6181 attgcgcgga cgtcgtgacg ttaaaccgtt gcagcagtcc ggcagcgcgg caggcgcaga
     6241 gttcgccctg gcaggtgccc atccccacac gggtacgacg gcgtaaatcc agcaggctat
     6301 taacgtttaa attttctacc gcgtactgca cttcacccgc agttaccgct tcgcactcac
     6361 ataccaggct acggtgcaga cggccttcgc tcagccaggc aggcgtgcga tcgccatgac
     6421 gataaaccgc agaaccgcgc agcggggcag gcagggagat gactttacgc aaggtaactt
     6481 cagcgggttc ttgtgaacca ggcagtgcca gatcggcagt cgtacagggg cgcgtgttgc
     6541 ccagtttgcg gcataccgcg tcggtagccc attcagccat cagccgatag gtcatcagtt
     6601 tgccaccggt gatggtgata aatccgtcca gaccatcgcg ttcagcatgg tcgagcagca
     6661 cgatgccacg gctgacgtta cgtccgctcg ggtcgtcatc gctggcaacc agcgggcgca
     6721 cgccagaata ggcccgcaaa atgcgcgttt tcgccatcac gggggccagt tttttccctt
     6781 cacgcagcag aatatcaacc tcttctgccg tcactcgatt atcgtcaatc tcgttgtaat
     6841 caatacgtaa agaggtggta ccaatcagcg aaatggtatc gccaggcacc agaatatcgg
     6901 cgtcggaagg tttacggcag cggttgatca catgctggtt aatgcggtga tccatgatca
     6961 gcagcgatcc tttcgccggg aacatgcgaa tgcgcagatc ggcatattcg gcaatgtgtt
     7021 gcccccagat cccagcggca ttaaccacga caggtgcatg aagggcctga gtttcgccgg
     7081 tgagatggtt acgtacacga acaccgcaca ccgtcgcgcc ttcacgaatc agccccgtga
     7141 cttcatgagc ggtaaggata acggcaccgt gttctttggc atccagcatg tttgctgcgg
     7201 tcagacgaaa tggatcaacg gtgccatccg gaactttcac cgcgccaatc agtgccgggt
     7261 taacggcagg ttcgataatg cgcgcttgct gcgggtctat agcttctgcg ctgatccctg
     7321 cttcttcgca ggcgcgaata aaagtggcct ggaaggagag gtcatcttcc ggcagggtaa
     7381 taaacaggcc gttggttggt tcaacgcagt gacgtgcaat gcgtttcagg atctggtttt
     7441 cactaatgca ttcgcgggcc gattccgcat cggttaccgc atagcgcgca ccgctgtgca
     7501 gcaggccgtg gttacgcccg gtggcaccgg ttgcgatgtc gtggcgctca accaaaatca
     7561 cgcgcagccc gcgcagggca cagtcgcggg caatcccggc tcccgttgcg ccgccaccaa
     7621 tgataatcac gtcacttgat tgcgagtcgc gagttttcat tgttatccct ctgaagttcg
     7681 ttttttacca tttagccata gtaaaaacat gaattgtttg atttcgcgca tattcgctca
     7741 taattcgaaa gtgaaacgtg atttcatgcg tcattctgaa cattttgtaa atcttattta
     7801 ataatgtgtg cggcaattca catttaattt ctgaatgttt tcttaacatc gcggcaacta
     7861 aagaaacggc aggttctccc actgaatcag tctgttaatc ataaataaga ccacgggcca
     7921 cggaggcttt caatgttgag tatttttaaa ccagcgccac acaaagcgcg cttacctgct
     7981 gcggagatcg atccgactta tcgtcgattg cgctggcaaa ttttcctggg gatattcttt
     8041 ggctatgcgg cttactattt ggttcgtaag aactttgcgc ttgctatgcc ttatctggtc
     8101 gagcagggat tctctcgcgg tgatttaggt ttcgcgcttt cggggatctc gatcgcttat
     8161 ggattttcga aattcataat gggttcggta tcggatcgct cgaatccgcg cgttttcctc
     8221 cccgcaggtt tgattctggc ggcggcagtg atgttgttta tgggctttgt gccatgggcg
     8281 acgtcgagca ttgcggtgat gtttgtactt ttgttcctct gcggttggtt ccaggggatg
     8341 gggtggccgc cgtgtggtcg tactatggtg cactggtggt cgcagaaaga acgtggcggc
     8401 attgtgtcag tgtggaactg tgcgcacaac gttggtggtg gtattccgcc gctgctgttc
     8461 ctgctgggga tggcctggtt caatgactgg cacgcggcgc tctatatgcc cgctttctgc
     8521 gccattctgg tggcattatt cgcctttgcg atgatgcgcg ataccccgca atcctgtggc
     8581 ttgccgccga tcgaagagta caaaaatgat tatccggacg actataacga aaaagcggaa
     8641 caggagctga cggcgaagca aatcttcatg cagtacgtac tgccgaacaa actgctgtgg
     8701 tatatcgcca tcgccaacgt gttcgtttat ctgctgcgtt acggcatcct cgactggtca
     8761 ccgacttatc tgaaagaggt taagcatttc gcgctggata aatcctcctg ggcctacttc
     8821 ctttatgaat atgcaggtat tccgggcact ctgctgtgcg gctggatgtc ggataaagtc
     8881 ttccgtggca accgtggggc aaccggcgtt ttctttatga cactggtgac catcgcgact
     8941 atcgtttact ggatgaaccc ggcaggtaac ccaaccgtcg atatgatttg tatgattgtt
     9001 atcggcttcc tgatctacgg tcctgtgatg ctgatcggtc tgcatgcgct ggaactggca
     9061 ccgaaaaaag cggcaggtac ggcagcgggc tttaccgggc tgtttggtta cctgggcggt
     9121 tcggtggcgg cgagcgcgat tgttggctac accgtggact tcttcggctg ggatggcggc
     9181 tttatggtaa tgattggcgg cagcattctg gcggttatct tgttgattgt tgtgatgatt
     9241 ggcgaaaaac gtcgccatga acaattactg caaaaacgca acggaggcta atggcatgaa
     9301 attgaagctg aaaaacctta gcatggcgat catgatgagc actatagtca tgggaagcag
     9361 tgcaatggcg gcggacagca acgaaaaaat agtcatcgcc catcgcggtg ccagtggata
     9421 tttgccggag catacgctgc cagcaaaagc gatggcgtat gcgcagggag cggattatct
     9481 ggaacaggat ttggtgatga ccaaagacga ccatctggtt gttctgcatg accattatct
     9541 cgatcgtgtt actgatgttg ccgatcgttt cccggatcgg gcgcgcaaag acggtcgtta
     9601 ctacgcgata gatttcacgc tggatgaaat taagtcgctg aaatttaccg aaggtttcga
     9661 tattgaaaac ggtaaaaaag tacagactta tccggggcgt ttcccaatgg gtaagtccga
     9721 cttccgggtg cacacctttg aagaagagat tgaatttgtt caggggttaa atcactctac
     9781 cgggaaaaat atcggtatct atccagaaat taaagcgccg tggttccatc atcaggaagg
     9841 gaaggatatt gcggcaaaaa cgctggaagt gctgaagaaa tatggttaca ccggtaagga
     9901 cgacaaagtt tatttgcaat gttttgatgc tgatgagctg aagcgtatta agaatgagct
     9961 ggaacccaaa atgggcatgg atctcaatct ggtacagctg attgcctata ccgactggaa
    10021 tgaaacgcag cagaaacagc cggatggaag ctgggttaat tacaactacg actggatgtt
    10081 taagccgggt gctatgaaac aggtggcgga atatgccgac ggtatcgggc cggattacca
    10141 tatgttgatt gaggaaacat cgcagccggg taatatcaaa ctcactggca tggtgcaaga
    10201 tgctcagcag aataaactgg tagtgcatcc ttataccgtg cggtcagata aactgcctga
    10261 atacactatt gatgtgaatc agttatatga tgctctgtat aacaaagcgg gtgtaaatgg
    10321 gctgtttact gatttccctg ataaggcagt aaaattcctt aataaagagt aatgctactg
    10381 caggatggcg ttcatgcgcc atcctgtctc acatcaaatt tttccattca ccacgagttg
    10441 ttccgtacac gtttgtagta aaaacagtgg actgccttct accggctttt ctttagccaa
    10501 caacgaaatc tgtcgataga aggttggttc gtgaggaacg gaacacaatt cacctgcaat
    10561 gcttttcagc gttaactctg gttgtaaggc gatgcctaat ccctgtcgaa taaacttcat
    10621 cgctgtatcc tactgattaa attcacattt tatctactgg gcgcactatt agtggtagtg
    10681 gctggtggaa tctatgcgct gcaaatgaag ggtaaaagcg gtgtcacgct agtagtggca
    10741 aaagaaattc attaatacga cacgtttcat taagattttc ctcaggtaac cacctatagt
    10801 cattgtcgtt aataaaaatg acaggcgata gggtatggca gtttcagcaa agtacgacga
    10861 atttaatcac tggtgggcaa cagagggcga ctgggttgaa gagcctaact atcgccgtaa
    10921 tggtatgagc ggggtgcaat gcgtcgagcg caacggcaaa aagctgtatg taaagcgcat
    10981 gacgcatcat ctgtttcatt ccgtacgtta tccgttcggc cgaccaacga ttgtccgtga
    11041 ggttgcggta attaaagaac tggaacgggc cggtgtcatc gtgccgaaga tcgtttttgg
    11101 tgaagcggtg aaaattgagg gtgaatggcg agcgttgctg gtgactgaag atatggcggg
    11161 gttcatcagc attgctgact ggtatgccca gcatgcagta ttgccttatt ctgacgaagt
    11221 acggcaagcc atgttgaaag cagtggcgct ggcgtttaag aaaatgcata gcattaatcg
    11281 tcagcatggc tgttgttatg ttcgccatat ctatgtgaaa acagaaggta atgcagaagc
    11341 tggttttctt gacctggaga aaagtcgtcg ccgcttgcgt cgcgataaag cgattaatca
    11401 tgacttccgc cagctggaaa aatatctgga gccaatcccc aaagtggact gggagcaggt
    11461 gaaagcgtat tactacgcca tgtaatcgtt gtaggccaga taagacgcat aagcgttgta
    11521 tctggcacta caaccaattc acatctcgat ttcaatatcg ccttttgccc ggcaacaaca
    11581 gggcaaaatt tcccccggct gaataaaggc taacggttcg gcaatccagt caacctgacc
    11641 tgcaaccaga cgggtgcgac aggagccgca gtaaccttcg cgacactgat actcaaccgc
    11701 cacattgtgg gattccagcg ccgccagaag ggaagggtgt tcatcctggc acagcagttg
    11761 tgtgccagtg atgcgcaggg taacgcgggc catcagagtt ggaagttact caaatcgtcg
    11821 gtgtccactt ccgcgtcaat ctgcccgacc agataagaac tgacttccac ttcctgcgga
    11881 gcaacctgca cgttatcaga caccagccag gtgttgatcc atgggatcgg gttggagcgc
    11941 gtctggaacg gcagatccaa accgactgcc tgcatacgga tattggtgat gtattcaacg
    12001 tactggcaga gaatgtcttt attcagacca atcatcgaac cgtcgcggaa cagataatcc
    12061 gcccagtctt tctcctgttg agctgcctga acaaacaggt catagcactc ctgcttacac
    12121 tcttcggcaa tttccgccat ctcaggatcg tccgcgccgc tgcgcagcag attcagcata
    12181 tgctgggtgc cggtcaggtg cagggcttcg tcgcgggcaa tcaggcgaat aattttggcg
    12241 ttgccttcca tcaattcgcg ttctgcaaat gcgaaggaac aagcaaagct gacgtagaaa
    12301 cgaatcgctt ccagcgcgtt aacgctcatc aggcagagat acagtttttt cttcagctcg
    12361 cgcaggctaa cggtcacagt tttaccgtta acggtgtggg taccttcgcc cagcagatgc
    12421 cagtagctgg tcatttcgat cagctcatcg taatagctgg agatcccttc cgcacgtttc
    12481 tggatctgct cgttggtgac gatatcgtca aacacaacag acggatcgtt aacgatatta
    12541 cgaatgatat gagtatagga acgggaatga atcgtttctg agaacgccca ggtttcgacc
    12601 caggtctcca gttccgggat cgagatcagc ggcagcagtg ccacgttcgg gctacggccc
    12661 tgaatggaat ccagcagcgt ctgatatttc aggttgctga taaagatgtg tttttcgtgt
    12721 tcaggcagtg cctggtaatc gatacggtcg cgagaaacgt caacttcttc cggacgccag
    12781 aagaaagaga gctgcttttc gatcagcttt tcgaagatgt catatttttg ctgatcgtag
    12841 cgagccacgt tgaccggctg accaaagaac atcggttctt tgagctgatc atttttcgtc
    12901 tgtgaaaagg tggtatatgc catgagtgtg tcctgtggtt ttattacccc tcacccttac
    12961 cctctcccgc aaggggagag gggacggttt ggtgcaaagg ctgggggatt atcagatctt
    13021 acatgcgccg ctttcgcagc catcgtcctg gattgacggc accagatcgt cctgcgcgtc
    13081 ttcagcgccg tcacgggtgt tctgataata cagcgttttg accccgaatt tgtaggcggt
    13141 gagcaggtct ttcagcaact gctgcatcgg cacttttcct gacgggaaac gtgacggatc
    13201 gtagttggtg ttagcagaga tcgactgatc gataaatttc tgcatgatac ctaccagttg
    13261 caggtagcca tcgttacccg gcatttccca cagcagctca taggcgtcgt gcaggtgctc
    13321 gtagtccggc accacctggc gcaaaatacc gtctttcgac gctttgatgc tgacgtaacc
    13381 gcgcggcggt tcaataccgt tagtggcgtt agagatctgt gaagaagtct ctgacggcat
    13441 cagggcagaa agcgtggagt tacgcaggcc gtgcgttttg attgattcac gcaatgcttc
    13501 ccagtcgtaa tgcagcggct cattagcgat ggtatccaga tctttcttat aggtatcgat
    13561 cggcaggatc cctttcgcgt aagtggtttc gttaaaccac gggcacgcgc cttgctcttt
    13621 tgccagctcg ttagacgctt tcagcaggta atactgaatc gcttcgaagg ttttatgcgt
    13681 caggttgttg gcgctgccgt cggagtaacg cacaccgtgc ttcgccaggt agtaagcgaa
    13741 gttgatcaca ccaataccca gcgtacgacg acccatcgct ccacgtttgg cggccgggat
    13801 cgggtaatcc tgataatcca gcagcgcgtc aagtgcacga accgccagaa ttgctagctc
    13861 ttccagttca tccaggctat taattgcgcc caggttgaaa gcagacagcg tacacagcgc
    13921 gatttcaccg ttctcgtcgt tgacgtcgtt cagcggtttg gtcggcaggg ctatctccag
    13981 gcacaggtta gactgacgca ctggcgcgat ggccggatca aacgggctat gggtattgca
    14041 gtggtcaacg ttctgaatat agatacgacc ggtagacgca cgttcctgca tcatcagcga
    14101 gaacagctca acggctttca cacgctgctt gcggatgctg tcgtctttct catatttggt
    14161 atacaggcgt tcaaactctt cctgatcggc gaagaatgcg tcgtacagcc ccggtacgtc
    14221 ggacgggctg aacagggtga tatcttcacc tttcagcagg cgggtataca tcagtttgtt
    14281 gatctgtacc ccgtagtcca tatggcgcac gcggttgcct tccacaccac ggttgttttt
    14341 caacaccagc aggctttcca cttccagatg ccacatcggg tagaacagcg ttgccgcacc
    14401 gccgcgcacg ccgccctgag agcaggattt caccgctgtc tggaaatgtt tgtagaacgg
    14461 aatacagccg gtatggaacg cttcaccacc gcgaatcggg ctacccagcg cacgaatacg
    14521 cccggcgttg atgccgatcc cggcacgctg ggaaacgtat ttcacaatcg cgctggaggt
    14581 agcgttgatg gaatccagac tgtcaccgca ctcgatcagt acgcaggagc tgaactgacg
    14641 agtcggggta cgcacgccgg acatgattgg cgtcggcagc gaaattttaa atgtggaaac
    14701 cgcgtcgtaa aaacgcttca catattgcag gcgcgtttca cgcgggtagt tcgagaacag
    14761 gcacgcggca accagaatat aaaggaactg ggcgctttcg tagatttcgc cggtcacgcg
    14821 gttctgtacc agatatttgc cttccagctg cttaacggca gcataagaga aggtcatatc
    14881 acggtcgtga tcgataaacg tgtccatctg cttgaactct tcttccgtgt agtcttccag
    14941 cagatgatta tcgtatttgc ccatctcgac cattttcacc acgtggtcgt acagcgcagg
    15001 cggctcaaac tggccgtagg cttttttacg caggtggaag atcgccaggc gcgcggcgag
    15061 atactgataa tccggcgcat cacgggagat caggtctgcg gccgccttga taatggtttc
    15121 gtggatgtca gaggtcttga taccgtcata aaactgaatg tgggagcgca gctcgacctg
    15181 ggaaatcgaa acgttatgca gtccttctgc cgcccaatcc agaacgcgat ggattttgtc
    15241 gagattgatg cgctctgtgc taccgtcgcg ctttgtcacc agcagattct gattcatgta
    15301 tgtcgtacct gtttttggaa ttctttccgc aatagtttca tgcagactac ctgtagtacg
    15361 ggaagctgct tagaacacta tatatagggg gtatgtttgg gattcactgc aagatagtgt
    15421 gaaaatggcc ctcttgcaag tgcataactt tgtggataac tcaggaagga aaaagtggct
    15481 ttcgcgcacc ttaggtcaga caaggtgtcc gggaaagtca atgggaagag aaaaatttgt
    15541 taaaaataac tgttcggcga tttcttgaac ggcagaatag gttggataaa ttgatataga
    15601 tggtttatta atctttttgc taatgattgc aaaaattgat ctaagcacga gtcatcacat
    15661 aatctgatgt atcagttgtg gtcaatatat aagcgaatgt aagcgattgt tgatg
//
LOCUS       DAPGWB010000101        15701 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.102, whole genome shotgun sequence.
ACCESSION   DAPGWB010000101 DAPGWB010000000
VERSION     DAPGWB010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15701
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.102"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..1346)
                     /gene="uidB"
                     /locus_tag="RHX79_003095"
     CDS             complement(<1..1346)
                     /gene="uidB"
                     /locus_tag="RHX79_003095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide transporter"
                     /protein_id="HDV2198240.1"
                     /translation="MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAA
                     AAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTD
                     WSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV
                     CLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLK
                     ISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVG
                     TVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG
                     VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYI
                     ANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQ"
     gene            complement(1343..3154)
                     /gene="uidA"
                     /locus_tag="RHX79_003096"
     CDS             complement(1343..3154)
                     /gene="uidA"
                     /locus_tag="RHX79_003096"
                     /EC_number="3.2.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucuronidase"
                     /protein_id="HDV2198241.1"
                     /translation="MLRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRA
                     IAVPGSFNDQFADADIRNYVGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQ
                     EVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSY
                     FHDFFNYAGIHRSVMVYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRD
                     ADQQVVATGQGTSGTLQVVNPHLWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAV
                     KGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYA
                     EEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAI
                     KELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCD
                     AHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVD
                     TLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGN
                     KKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQGGKQ"
     gene            complement(3542..4132)
                     /gene="uidR"
                     /locus_tag="RHX79_003097"
     CDS             complement(3542..4132)
                     /gene="uidR"
                     /locus_tag="RHX79_003097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator UidR"
                     /protein_id="HDV2198242.1"
                     /translation="MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAIS
                     PGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQR
                     ALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTSMTSRLLL
                     DLTYGVLADIEAEDLAREASFAQGLRAMIGGILTAS"
     gene            complement(4361..5128)
                     /gene="hdhA"
                     /locus_tag="RHX79_003098"
     CDS             complement(4361..5128)
                     /gene="hdhA"
                     /locus_tag="RHX79_003098"
                     /EC_number="1.1.1.159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-alpha-hydroxysteroid dehydrogenase"
                     /protein_id="HDV2198243.1"
                     /translation="MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN
                     ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAVSKLGKVDILVNNAGGGGPK
                     PFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA
                     SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITSEIEQKMLQHTPIRRL
                     GQPQDIANAALFLCSPAASWVSGQILTVSGGGVQELN"
     gene            complement(5240..6268)
                     /gene="malI"
                     /locus_tag="RHX79_003099"
     CDS             complement(5240..6268)
                     /gene="malI"
                     /locus_tag="RHX79_003099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mal regulon transcriptional regulator MalI"
                     /protein_id="HDV2198244.1"
                     /translation="MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAA
                     IEELGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHG
                     GKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVD
                     TVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSD
                     WVLECTSSQKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDR
                     YFEQQVSLAAFTDATPTTLDDIPVTWASTPARELGTTLADRMMQKITHEETHSRNLII
                     PARLIAAK"
     gene            6443..8035
                     /gene="malX"
                     /locus_tag="RHX79_003100"
     CDS             6443..8035
                     /gene="malX"
                     /locus_tag="RHX79_003100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS maltose transporter subunit IICB"
                     /protein_id="HDV2198245.1"
                     /translation="MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSS
                     HDVITLIPVLGNPVLQAIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGF
                     VGYAVMNLAVNFWLTNKGILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWM
                     LHERFHNIRLPDALAFFGGTRFVPIISSLVMGLIGLVIPLVWPIFAMGISGLGHMINS
                     AGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSC
                     PTTHGFSESATRFLSQGKMPAFLGGLPGAALAMYHCARPENRHKIKGLLISGLIACVV
                     GGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHG
                     LSTKWYMVPVVAAIWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKAVAGAPGKSGY
                     NVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVNVQALKDNRAIGVVQLNQHNLQV
                     VIGPQVQSVKDEMAGLMHTVRA"
     gene            8045..9217
                     /gene="malY"
                     /locus_tag="RHX79_003101"
     CDS             8045..9217
                     /gene="malY"
                     /locus_tag="RHX79_003101"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional maltose regulon transcriptional
                     repressor/cystathionine beta-lyase MalY"
                     /protein_id="HDV2198246.1"
                     /translation="MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAP
                     CIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDTQTVVYGPSVIYMVSE
                     LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADDWFCDMGKLEAVLAK
                     PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWS
                     NVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTA
                     HIAAYQQGAPWLDALRVYLKDNLTYISDKMNAAFPELNWQIPQSTYLAWLDLRPLNID
                     DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR"
     gene            9321..10322
                     /gene="add"
                     /locus_tag="RHX79_003102"
     CDS             9321..10322
                     /gene="add"
                     /locus_tag="RHX79_003102"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HDV2198247.1"
                     /translation="MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLI
                     PHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARHGLHYVELRFSPG
                     YMAMAHQLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR
                     DQITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAER
                     IGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSSVAELAAHPLKTFLEHGIRASIN
                     TDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK"
     gene            complement(10357..11397)
                     /locus_tag="RHX79_003103"
     CDS             complement(10357..11397)
                     /locus_tag="RHX79_003103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDV2198248.1"
                     /translation="MSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVK
                     ADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLS
                     QARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVR
                     DRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSY
                     PQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRD
                     GVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGI
                     ESAKHRATLCLA"
     gene            11640..11765
                     /gene="blr"
                     /locus_tag="RHX79_003104"
     CDS             11640..11765
                     /gene="blr"
                     /locus_tag="RHX79_003104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division septum protein Blr"
                     /protein_id="HDV2198249.1"
                     /translation="MNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK"
     gene            12038..12253
                     /gene="ydgT"
                     /locus_tag="RHX79_003105"
     CDS             12038..12253
                     /gene="ydgT"
                     /locus_tag="RHX79_003105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription modulator YdgT"
                     /protein_id="HDV2198250.1"
                     /translation="MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAAD
                     HRRAELVSGGRLFDLGQVPKSVWHYVQ"
     gene            12339..12779
                     /locus_tag="RHX79_003106"
     CDS             12339..12779
                     /locus_tag="RHX79_003106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707526.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2569 domain-containing protein"
                     /protein_id="HDV2198251.1"
                     /translation="MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTF
                     QTLGGQALTTQILWGVSFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAV
                     KAFAFSPVEDGIAVRQLLFTLLATALIVPYFKRSSRVKATFVNP"
     gene            12856..13437
                     /gene="rsxA"
                     /locus_tag="RHX79_003107"
     CDS             12856..13437
                     /gene="rsxA"
                     /locus_tag="RHX79_003107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017456621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HDV2198252.1"
                     /translation="MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA
                     TTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL
                     LGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAIGFSLVMVLFAAIRERLAV
                     ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL"
     gene            13437..14015
                     /gene="rsxB"
                     /locus_tag="RHX79_003108"
     CDS             13437..14015
                     /gene="rsxB"
                     /locus_tag="RHX79_003108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HDV2198253.1"
                     /translation="MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEIL
                     PQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQE
                     LTPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTH
                     CISLQPVAETPDSWKWDLNTIPVRIIPVEHHA"
     gene            14008..>15701
                     /gene="rsxC"
                     /locus_tag="RHX79_003109"
     CDS             14008..>15701
                     /gene="rsxC"
                     /locus_tag="RHX79_003109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HDV2198254.1"
                     /translation="MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFV
                     IPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSA
                     LAELSVIIDADGEDCWIPRDGWADYRSRRREELIERIHQFGVAGLGGAGFPTGVKLQG
                     GGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKP
                     QAISMLRAVLADSHDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNV
                     GTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQM
                     VIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLL
                     PQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEE
                     KRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQAT
                     QPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIAR"
BASE COUNT         3729 a         4077 c         3909 g         3986 t
ORIGIN      
        1 tgctgcactt ttttacgatt atcaatttca accacgattt ctttgaattt tttatccgtg
       61 agcggataaa accagataat aacgaatgcc agtagcataa atccgcaagg tactaaggca
      121 attgatgtgc ggatgcccat aataacttcc ggcgtttgca cctgattggc gatatatccg
      181 cttaatccca aaataaaggc aggaattgaa cctccgattg cctgaccgca tttacgggta
      241 aatgagaata gtgaataggt gagcccttca attcgcacgc cggtcaggta ttcaccgtat
      301 tctacggtat cagcttccag tgcccacatc acagtcatag taacgccctg accaattgaa
      361 gcgatggcca acgcaaccaa cgccaccggc agtgaccaga cggaaaccca gaagaatagc
      421 agataaccgc aggttcccag caaagcgcca atcaggaagg tattcttttt accgatcctc
      481 gcgaccatcc ccggcaccag cggtgccgat gccacagtac caaccaggtt ttgcaccagt
      541 accagcacag tgaacagccc ggtatcattt aacacatagc gcacgtagaa caacgacgag
      601 gcgctgaccg cgaaggtcga aatcagcaca cacagcgcac cgatgcacaa cataaacagc
      661 gggcgattcc gtttcagggt ttgcagactg atcttcaatg acggctgcgc cacgatacgt
      721 accacattct cacgcgtcga tttgaagcag atgaagtaaa gcaccattcc ggcaatcgcc
      781 agcacaatcg tccagaaatg gtataccgac accatctctt ccgggctgga gttcttaatg
      841 ctcggtccta tcagaaatgc caggcagaca aaggttaatg aagcggcaat cccgcgagcc
      901 gcgcccagac gggcgcggga ttgtggttgt tgggtcatcg cggtagcaag tgaaccataa
      961 ggaatattca ccaggctgta gcaaagcccg aggcccatgt aggtcaaata tgcatacact
     1021 actttgctgc tatggctcca gtcggtcggt acccagaata ccagcacgct gaagatcatt
     1081 aacggcgcag taccgaagag taaaaacggg cggaattttc cccagcgggt attcacactg
     1141 tccaccactc gtccggcaaa gacgtcggcg aaggcatcga atacccgcac cagtaacagc
     1201 atggtgcccg ccgcagcggc accgacgcca gcgacgtcgg tgtagtaact caataggaag
     1261 agcgccccca ttgcgaaggc gaagttattg gcgacgtcac cgaggctgta gccgacgatg
     1321 gtgcgccagg agagttgttg attcattgtt tgcctccctg ctgcggtttt tcaccgaagt
     1381 tcatgccagt ccagcgtttt tgcagcagaa aagccgccga cttcggtttg cggtcgcgag
     1441 tgaagatccc tttcttgtta ccgccaacgc gcaatatgcc ttgcgaggtc gcaaaatcgg
     1501 cgaaattcca tacctgttca ccgacgacgg cgctgacgcg atcaaagacg cggtgataca
     1561 tatccagcca tgcacactga tactcttcac tccacatgtc ggtgtacatt gagtgcagcc
     1621 cggctaacgt atccacgccg tattcggtga tgataatcgg ctgatgcagt ttctcctgcc
     1681 aggccagaag ttctttttcc agtaccttct ctgccgtttc caaatcgccg ctttggacat
     1741 accaaccgta ataacggtta aggcacagca catcaaagag atcgctgatg gtatcggtgt
     1801 gagcgtcgca gaacattaca ttgacgcagg tgatcggacg cgtcgggtcg agtttacgcg
     1861 ttgcttccgc cagtggcgcg aaatattctc gtgcaccttg cggacgggta tccggttcgt
     1921 tggcaatact ccacatcacc acgcttgggt ggtttttgtc acgcgctatc agctctttaa
     1981 tcgcctgtaa gtgcgcctgc tgagtttccc cgttgactgc ctcttcgctg tacagttctt
     2041 tcggcttgtt gcccgcttcg aaaccaatgc ctaaagagag gttaaagccg acagcagcag
     2101 tttcatcaat caccacgatg ccatgttcat ctgcccagtc gagcatctct tcagcgtaag
     2161 ggtaatgcga ggtacggtag gagttggccc caatccagtc cattaatgcg tggtcgtgca
     2221 ccatcagcac gttatcgaat cctttgccac gcaagtcagc atcttcatga cgaccaaagc
     2281 cagtaaagta gaacggtttg tggttaatca ggaactgttc gcccttcact gccactgacc
     2341 ggatgccgac gcgaagcggg tagatatcac actctgtctg gcttttggct gtgacgcaca
     2401 gttcatagag ataaccttca cccggttgcc agaggtgtgg attcaccact tgcaaagtcc
     2461 cgctggtacc ttgtccagtt gcaaccacct gctgatccgc atcacgcagt tcaacgctga
     2521 catcaccatt tgctaccacc tgccagtcaa cagacgcgtg gttacagtct tgcgcaacat
     2581 gcgtcaccac ggtgatatcg tccacccagg tgttcggcgt ggtgtagacc attacgctgc
     2641 gatggatccc ggcatagtta aagaaatcat ggaagtaaga ctgctttttc ttgccgtttt
     2701 catcggtaat caccattccc ggcgggatag tctgccagtt cagttcgttg ttcacacaaa
     2761 cggtgatacg tacacttttc ccggcaataa catacggcgt gacatcggct tcaaatggcg
     2821 tatagccgcc ctgatgctcc atcacttcct gattattgac ccacactttg ccgtaatgag
     2881 tgaccgcatc gaaacgcagc acgatacgct ggcctgccca acctttcggt ataaagactt
     2941 cgcgctgata ccagacgttg cccacataat tacgaatatc tgcatcggcg aactgatcgt
     3001 taaaactgcc tggcacagca attgcccggc tttcttgtaa cgcgctttcc caccaacgct
     3061 gatcaattcc acagttttcg cgatccagac tgaatgccca caggccgtcg agttttttga
     3121 tttcacgggt tggggtttct acaggacgta acataaggga ctcctcattc aaataaaaat
     3181 actggtcaac ctttaatctg attagttaac caattctgtg ttgcacacag ttatctgtga
     3241 gaaacccatg gaagagaaat ggaaataaaa agaactgaca ccgcgatcaa aaaaccaaaa
     3301 tctgcaatac ccacagcgtg atatagatcg cattaatctt taaaacagcg ttgacagaag
     3361 ccataaaata agcaatcgaa cgttcgttcg agcatcttga gaacgataaa ctctcatgac
     3421 atatggctac ggtgaatatt tttgggggga attctccgat cccggctaga ttgtattttg
     3481 tacagggaaa ttaaagtatg aaacgcgggc acagttatca ccagcccgcg aaatgagagg
     3541 atcaggatgc ggttaagata ccgccaatca tcgcgcgtaa tccctgagca aacgacgctt
     3601 cacgcgccag gtcttccgct tcgatatcgg ccagtacacc gtaggtcaga tccagcagta
     3661 aacgtgaagt cattgacgtg ttgatgtctg ggcttatctc gcctttttgc tgggcatcac
     3721 gcatccgctg ggcaacaaat tcagtgatcg tcatatgctt atttttaagc atggcggcga
     3781 cctgtgggtt acgcatccct tccgccataa tttcgaccac cagcgcccgt tgcccaaagg
     3841 cttcatgggt gagagagaca atagactcga ccatatagtc aacaaaatga atcccttcaa
     3901 tcggttcccg gaaacgggcc agcgccctct cctggtcctg taagataatc gcctgaatca
     3961 aggcttcttt ggagatgaaa tggtgataga gcgtcccggg actaatggcg caggatttac
     4021 agatggcttt catcgaggca ctgtgaaatc cattttctga aaaaatctct ctggcagcat
     4081 tgaggatccg ggtccgtgtc ggttgtgctt cagtctgcat gttatccatc attaaaccat
     4141 tatagttagc gtgaataact agtttaccgc gttgtcaggt gagcgcctat cattgctgtt
     4201 gaatagtgcg aaggcacact ctattcgtat gcttttcatc cagctattgg ttaaccaata
     4261 gccgtgattt ggctgccagt tgtttagcag agacgttgat gaattgcaca cgctatcccg
     4321 gtaaacaaca catacggctg tttaccggtt cgttagtgta ttaattgagc tcctgtaccc
     4381 caccaccgga gacggtgaga atttgtccgc ttacccagct ggctgcaggc gagcaaagga
     4441 acagcgccgc gttagcaata tcttgcggtt ggcccagacg tctgatcggc gtgtgctgta
     4501 acattttttg ttcaatttct gatgtaataa cggatttcag ggcatcggtt aatattgccc
     4561 ccggcgcaat gccattcacc cgaatatttt tttcacccag gtcaaatgcc atatttctga
     4621 ccagatgact ggccgcagct ttagatgatg cataggaagt catgtttata tttttatttt
     4681 ctgccgccat agaagtgatg gtcagaataa cgccaccgcc atttttttcc atttctggcg
     4741 caacaagttg tgacagatgg aaaaaagaaa acacattcag ttcataagca cggcgaaaat
     4801 ctgccattgg catatcaaac ggtttaggac caccgccacc ggcgttgtta accaggatat
     4861 caactttacc cagcttactg acggcaaagt ctgccagtgc agagagttcc tgttcggaag
     4921 taatatcaca acggcaggca aatgcctgac cacccagttg ttgaatttcg tctacaacat
     4981 ggttagctgc gtcggcgtta atatcactga ccaccacaga tgcgccagct gtcgcgaatg
     5041 taatggcgat ttctttacca atacctgcac ccgcacctgt gatgatggcg cattttccgt
     5101 cgagtctcag gttgtcagaa ttaaacacat aaacctcctg tgaacttcag taaaaataaa
     5161 aggcaccgcc tgtgtgccac attttttatc attaaccttg aggaaaggac actaccaggt
     5221 atagcagata aagagaggat tatttcgccg caatgagccg ggcgggaata ataagattgc
     5281 gtgaatgcgt ctcttcatgg gtgatttttt gcatcatgcg atccgcaagt gtggtaccaa
     5341 gttcccgcgc aggcgtgctg gcccaggtaa cgggtatatc atcaagtgtg gttggtgtcg
     5401 catcggtaaa tgccgccagc gaaacttgtt gctcaaagta acgatcgact ccgctttccc
     5461 cgctttgccg ccctgctttg agcaaaccaa accatgcccc catcgcaata gtttcgttat
     5521 agcaaaccac agcactgatg gtcgggttat gacgtaaaag cgccgtgata gcttccgcgg
     5581 cttgcttctg gctggatgtg cactccagca cccaatcgct gtgaaacggc aggccaaatt
     5641 ttagtagagt tgcacaatag ccccccaccc gttctgcacg ggttaatgag gaactttgcc
     5701 ctcccagcca ggcgatccgc tgatgcccat tgcgaatgag atgctccgtc aacaactgtg
     5761 cagcctgcat gttgtccggg cgaaccgtat caacatcatc aagataactg gcacgggaag
     5821 cgaaaatcac cgggatagct ttttcttctg ccatccgtcg caggtcatcg ctgcttcctg
     5881 cagccccggc aattaccaca ccatccacac cctgattcag taacagtgaa aaccgctgtg
     5941 ccagctgctc gccgtcttta ccgccgtgaa gcaaaaaaac catccgtccc tgcgcttcca
     6001 gagcttccgt caatccggcc gtcaattcgg cgtaaaacgg cgcagataaa tcacggacga
     6061 tcaaaccaat gacgccgctt tgcccgccgc gcagcgccga cgcctggcga ttgcgcacaa
     6121 atcccagctc ttcaatggcg gcgttaacgc gttctcctgt ggcggtagag attcgccctt
     6181 tgccactaag caccagcgaa acggtactta ccgacacgcc cgcagccagc gcaacatcat
     6241 gaatggttat ttttttggcg gtagccatgc agatgaccta ctccctgatt atgtgacaga
     6301 taaaacgttt taccttttat ttatcttata cccgctatta tcgttgcgta atgtgattta
     6361 tgcctcacta aaatttgata aaacgtttta tcttctcgcg caatttactg aatccagatt
     6421 gttctctacg aggagtcgtt ttatgacggc gaaaacagca ccgaaagtca cgctgtggga
     6481 gttcttccag cagttaggca aaaccttcat gttacccgtg gcattattgt cgttctgcgg
     6541 cattatgctc ggcattggta gttctcttag cagccatgat gtcataaccc tgatcccggt
     6601 cctgggcaac cccgtgttgc aggctatctt tacctggatg agtaagattg gctcgtttgc
     6661 ttttagtttc ctgcctgtca tgttctgtat cgccatcccg ctgggcctgg cacgcgaaaa
     6721 taaaggcgta gcggcattcg ctggcttcgt cggttatgcg gtaatgaacc tcgcggtaaa
     6781 cttctggttg accaataaag gcattctgcc aaccacggat gccgcggttc tgaaagccaa
     6841 taacatccag agcattcttg ggatccagtc gatcgatacc gggatcctcg gtgcggtgat
     6901 cgccggtatt atcgtctgga tgctgcatga gcgtttccat aatatccgcc tgccggatgc
     6961 gctggcattc ttcggcggta cgcgcttcgt accaattatc tcctcgctgg tgatgggcct
     7021 tatcggcctg gtgattccat tagtctggcc gattttcgcc atgggtatta gcggcttggg
     7081 ccatatgata aacagcgcgg gtgatttcgg accgatgctg tttggtaccg gtgaacgtct
     7141 gctgttgccg tttggtctgc atcacattct ggtggcatta attcgcttta ccgacgcagg
     7201 cggcacgcag gaagtctgcg gtcaaaccgt cagcggcgca ctgaccatct tccaggcgca
     7261 attgagttgc ccgaccactc acggtttttc tgaaagcgcc acgcgtttcc tttcgcaagg
     7321 taaaatgcct gcgtttctcg gcggtctgcc aggtgcagcg ttagctatgt atcactgcgc
     7381 gcgcccggaa aatcgccata aaattaaagg tctgctgatt tctggcctga tcgcctgtgt
     7441 cgttggcggc acgaccgaac cgctggaatt cctgttcctg ttcgtggcgc cagttctgta
     7501 tgtcatccac gcgctgttaa ccggcctcgg cttcactgtc atgtctgtgc tcggcgtcac
     7561 catcggtaat accgacggca atatcatcga cttcgtggtg ttcggtattt tgcatggtct
     7621 gtcaaccaag tggtacatgg tgccagtggt ggcggcaatc tggtttgtcg tttactacgt
     7681 catcttccgt ttcgctatca cccgcttcaa tctgaaaacc ccggggcgcg atagcgaagt
     7741 tgccagctca atcgaaaaag ccgttgccgg tgcgccgggt aaatcaggtt acaacgttcc
     7801 tgcaatcctc gaagcattag gcggtgccga caatattgtc agcctcgata actgcattac
     7861 ccgtctgcgt ttgtctgtga aagatatgtc gcttgttaat gtgcaggcac tgaaggacaa
     7921 tcgggcaatt ggcgtagtac aacttaatca acataacctg caggttgtta tcgggccaca
     7981 agttcagtca gtaaaagatg aaatggccgg tctgatgcat actgtccggg cataaggata
     8041 agatatgttc gatttttcaa aggtcgtgga tcgtcatggc acatggtgta cacagtggga
     8101 ttatgtcgct gaccgtttcg gcactgctga cctgttaccg ttcacgattt cagacatgga
     8161 ttttgccact gccccctgca ttatcgaggc gctgaatcag cgcctgatgc acggcgtatt
     8221 tggctacagc cgctggaaaa acgatgagtt tctcgcggct attgcccact ggttttccac
     8281 ccagcattac accgcaattg atacgcagac ggtggtgtat ggcccttctg tcatctatat
     8341 ggtttcagaa ctgattcgtc agtggtctga aacaggtgaa ggcgtggtga tccacacgcc
     8401 cgcctatgac gcattttaca aggccattga aggtaaccag cgcacagtaa tgcccgttgc
     8461 tttagagaag caggctgacg actggttttg cgatatgggc aagctggaag ccgtgttggc
     8521 gaaaccagaa tgtaaaatta tgctcctgtg tagcccacag aatcctaccg ggaaagtgtg
     8581 gacgtgcgat gagctggaga tcatggctga cctgtgcgag cgtcatggtg tgcgggttat
     8641 ttccgatgaa atccatatgg atatggtctg gggcgagcag ccgcatattc cctggagtaa
     8701 tgtggcgcgg ggagactggg cgttgctgac gtcgggctcg aaaagtttca atattcccgc
     8761 gctgaccggt gcttacggga ttatagaaaa tagcagcagc cgtgatgcct atttatcggc
     8821 actgaaagga cgtgatgggc tttcttcccc ttcggtactg gcgttaactg cccatatcgc
     8881 cgcctatcag caaggtgcac cgtggctgga tgccttacgc gtctatctga aagataacct
     8941 gacgtatatc tcagataaaa tgaacgccgc gtttcctgaa ctcaactggc agatcccgca
     9001 atccacttat ctggcctggc ttgatctacg tccgttgaat attgacgaca acgcgttgca
     9061 aaaagcgctt atcgagcaag aaaaagtcgc gatcatgccg gggtatacct atggtgaaga
     9121 aggtcgtggt tttgtccgtc tcaatgccgg ctgcccacgt tcgaaactgg aaaaaggtgt
     9181 ggctggatta ataaacgcca tccgcgctgt tcgctaaccc caattgcgca acgtaaaaaa
     9241 tcgttgcgca atcgtggatt tttaccctgc tttgttttta taatggtgcg cacttttata
     9301 ttcagaaaaa gagtgcgacc atgattgata ccaccctgcc attaactgat atccatcgcc
     9361 accttgatgg caacattcgt ccccagacca ttcttgaact tggccgccag tataatatct
     9421 cgcttcctgc acaatccctg gaaacactga ttccccacgt tcaggtcatt gccaacgaac
     9481 ccgatctggt gagctttctg accaaacttg actggggcgt taaagttctc gcctctcttg
     9541 atgcctgtcg ccgcgtggca tttgaaaaca ttgaagatgc agcccgtcac ggcctgcact
     9601 atgtcgagct gcgtttttca ccaggctaca tggcaatggc acatcagctg cctgtagcgg
     9661 gtgttgtcga agcggtgatc gatggcgtac gtgaaggttg ccgcaccttt ggtgtgcagg
     9721 cgaagcttat cggcattatg agccggacct tcggcgaagc cgcctgtcag caagagctgg
     9781 aggccttttt agcccaccgt gaccagatta ccgcacttga tttagccggt gatgaacttg
     9841 gtttcccggg aagtctgttc ctttctcact tcaaccgcgc gcgtgatgcg ggctggcata
     9901 ttaccgtcca tgcaggcgaa gctgccgggc cggaaagcat ctggcaggcg attcgtgaac
     9961 tgggtgcgga gcgtattgga catggcgtaa aagccattga agatcgggcg ctgatggatt
    10021 ttctcgccga gcaacaaatt ggtattgaat cctgtctgac ctccaatatt cagaccagct
    10081 ccgtagcaga gctggctgca catccgctga aaacgttcct tgagcatggc attcgtgcca
    10141 gcattaacac tgacgatccc ggcgtacagg gagtggatat cattcacgaa tataccgttg
    10201 ccgcgccagc tgctgggtta tcccgcgagc aaatccgcca ggcacagatt aatggtctgg
    10261 aaatggcttt cctcagcgct gaggaaaaac gcgcactgcg agaaaaagtc gccgcgaagt
    10321 aacaaaatgg atggtgcaaa ttgcaccatc catttttcat gcaaggcaca aagtcgcgcg
    10381 atgtttggcg gattcgatgc ccagctcaat caactccatt acctggattg cctggcttgc
    10441 cggaaccgga ttttcaccat cgccatttaa cgcatcacga atagccgcat agtaagccgg
    10501 ataattccca ggcaccgtca acagcgtttc ttcgacacgt tcctcacctt ccacgcgggt
    10561 aagtacgcca tcacgcatat cgtagcccca gtcttcctgc ggtagacgct cgccattttt
    10621 cagacgttct tcctgtggat cgaggccata tttcacataa ctgcctcggg atccatgcac
    10681 gatataccgt gctgactcag cggctgccag catggtaccg tgtaaaatga ctcgccgctg
    10741 tggataggac aagatggcgt ggaaataatc ggtcgactgc gctccgggcc gtaactgtgc
    10801 caaatctacc gtcatgctga ccggtaaacc aaaaagcgta atggcctgat caagaagatg
    10861 tggtgctaaa tcgtaccaga taccgctgcc tgggccgccc tgttcacgcc aacgatcgcg
    10921 tacctgcgga cggaagcggt caaaatgaga ctcaaagtaa gcaacttcac ccagcacgcc
    10981 ttccgcgagt aaacctttta gcgtcaagaa atcgctatcc cagcgacggt tatggaatac
    11041 agacagcaca cgccccaggc tttttgccag cgcatccagc tctcgcgctt gtgacagtgt
    11101 cacggtaaag ggtttatcaa cgaccacatg tttacccgcc tcaagcgccg ctttggctaa
    11161 cgggaaatgg gtatcgttgg gtgtaggaat gacaatcagg tctatgttgg gatcgttaaa
    11221 cagatgcttc ggctcagaga caaccgtaac cgttggccag tcggctttta cttttgtttc
    11281 atcactgctg gagattaccg ccagttccag cccgggcgtg cccgcaatca ggggcgcatg
    11341 gaaggttttg ctcgcataac catacccaat caacccaaca cggatgttgt cgctcatgtc
    11401 attgcctctc attgaagtat gatggctatt tgacactatc ctttacccac gctcaacagt
    11461 ttaataacct gccagcaata agggatgttg tttaacttaa gtcaaaaaaa tagcgaattt
    11521 tccaacgaca aaagctaaat atcgcaaaaa cctcagtaaa aatcttgctg gagctattat
    11581 tgctaagtaa catttacccc ctgaagttaa tggatcaatc aagagagatg tgggctgtaa
    11641 tgaatcgtct tattgaatta acaggttgga tcgttcttgt cgtttcagtc attcttcttg
    11701 gcgtggcgag tcacattgac aactatcagc cacctgaaca gagtgcttcg gtacaacaca
    11761 agtaagctct gcacttgtgg agcgacatgc tgcccgtccg ggtgcatgtt ttcacttgtc
    11821 ggatattaaa ccaggaattt attatcttgt ttgatgttgt tggtgattgt cagggatagt
    11881 aaagcgcgtt actcttttca gagcagtttt tcatccctga atatttgcca tcagcgcatt
    11941 cttattattg taataacaca agcgttcact tttggtgaaa ttttatcatc actaataata
    12001 cctacccctt tggtattaat tattttatgg accttttatg actgttcagg actacttatt
    12061 aaaatttcgc aaaatcagtt cactcgaaag tctggaaaaa ctctacgacc atcttaatta
    12121 caccctgacg gacgatcagg aactgatcaa tatgtatcgt gctgccgatc accgtcgcgc
    12181 agagctggtt tctggcgggc gtttgtttga cctcggccag gtaccgaagt ccgtctggca
    12241 ctatgtccaa taaagaaagt agcgatcggt tataaaagcc ttataataac gcccctaaaa
    12301 ttagatttgc ctgtttgcgt cgctattctg gagaacctat gaccaccaca acgccacaac
    12361 gtattggagg ctggttgctt ggcccgttgg cctggctttt agtcgctctg ttgagtacga
    12421 cgctggcgtt gttgctgtat accgctgcgt tatcttctcc gcaaacattt caaacgctcg
    12481 gcggacaagc actgacgaca caaatcttat ggggcgtttc ttttattacc gctatcgcca
    12541 tgtggtatta cacactgtgg ttgaccatcg ctttctttaa acgtcggcgt tgtgttccta
    12601 aacactatat tatctggctg cttatttccg tattgctggc agtaaaagca ttcgcttttt
    12661 cacccgtgga agatggcata gccgttcgcc agttgctgtt tactttgttg gcaaccgcat
    12721 tgatcgtccc ctatttcaaa cgctcgtcgc gggtaaaagc gacgtttgtg aatccgtaat
    12781 aaccttacag ttaacctgtt gtcgcctgct ctggattaac ggataatagg cggctttttt
    12841 atttcaggcc gaaaaatgac tgactacctg ttactgtttg tcggaactgt actggtcaat
    12901 aactttgtac tggtcaagtt tctcggtctc tgtccgttta tgggggtttc caaaaaactg
    12961 gaaaccgcga tgggcatggg gctggcaaca acgtttgtga tgacgctggc gtctatttgc
    13021 gcctggctta tcgatacgtg gattttgatc ccacttaatc tgatttacct gcgcaccctg
    13081 gcatttattc tggtgattgc tgtggtcgtg cagttcaccg agatggtggt gcgcaaaacc
    13141 agcccggtgc tttaccgtct gctggggatt tttttgccgc ttatcaccac caactgtgca
    13201 gtgctcggcg tggcgttgct gaatatcaat ctcgggcaca atttcttgca gtcggcgctg
    13261 tacggttttt ccgccgctat cggtttctcg ctggtgatgg tgctcttcgc cgccatccgc
    13321 gaacgccttg ctgtggctga tgtcccggca ccttttcgcg gtaatgccat tgcgttaatt
    13381 accgcaggtc ttatgtctct ggcctttatg ggctttagtg gtttggtgaa gttgtaatga
    13441 atgctatctg gattgccgtt gccgccgtga gcctgctggg cctggcgttt ggcgccattc
    13501 tgggttatgc ctcccgccgt tttgcggtgg aagacgatcc ggtcgttgag aaaattgacg
    13561 aaatcttacc gcagagccag tgtggtcagt gcggttatcc cggctgtcgc ccctacgcgg
    13621 aagccatcag ctgtaacggt gaaaaaatca accgttgcgc cccaggtggc gaagctgtga
    13681 tgctaaaaat tgccgagttg cttaatgtcg agccgcagcc gctggatggc gaagcgcaag
    13741 agctaacgcc tgcgcggatg gtggcggtta ttgatgaaaa taactgtatt ggctgcacta
    13801 aatgtattca ggcttgtccg gtagacgcca tcgttggcgc tacccgtgcc atgcatacgg
    13861 taatgagtga tctctgtacg ggctgcaatt tatgtgttga tccgtgcccg acgcactgca
    13921 tctcgttgca accggtcgca gaaacacctg actcctggaa atgggatctg aacaccattc
    13981 ccgtgcgtat cattcccgtg gaacaccatg cttaagttat tctctgcatt cagaaaaaat
    14041 aaaatctggg atttcaacgg cggcatccat ccaccggaga tgaaaaccca gtccaacggt
    14101 acacccctgc gccaggtacc actggcgcag cgttttgtta ttccactgaa acagcatatt
    14161 ggcgctgaag gtgagttgtg cgttagcgtc ggcgataaag tattgcgcgg ccagccgctt
    14221 acccgtggtc gcggcaaaat gctgcctgtt cacgcgccca cctcgggtac cgttacggct
    14281 attgcgcccc actctacggc tcatccttca gctttagctg aattaagcgt gattattgat
    14341 gccgatggtg aagactgctg gatcccacga gacggctggg ccgattatcg ctctcgccgt
    14401 cgcgaagagt taatcgagcg cattcatcag tttggtgttg ccgggctggg cggtgcggga
    14461 ttcccgacag gcgttaaatt gcagggcggc ggagataaga ttgagacgtt gattatcaac
    14521 gctgctgagt gcgagccgta cattaccgcc gatgaccgtt taatgcagga ttgcgcggct
    14581 caggtcgtag agggtattcg cattcttgcg catattctgc agccacgcga aattcttatc
    14641 ggcattgaag ataacaaacc gcaggcgatt tccatgctgc gcgcggtgct ggcggactct
    14701 cacgatattt ctctgcgggt gattccaacc aaatatcctt ctggcggtgc taaacaatta
    14761 acctacattc tgaccgggaa gcaggttcca catggcgggc gttcatccga tatcggcgta
    14821 ttaatgcaaa acgtcggcac tgcttatgca gtgaaacgtg ccgttattga tggcgagccg
    14881 attaccgagc gtgttgtaac cctgactggc gaagcaatcg ctcgcccggg caacgtctgg
    14941 gcacggctgg ggacgccagt gcgtcattta ttgaatgatg ccggattctg cccctctgcc
    15001 gatcaaatgg tgattatggg tggcccgcta atgggcttta ccttgccatg gctggatgtc
    15061 ccggtcgtaa agattaccaa ctgtctgttg gctccctctg ccaatgaact tggcgaacca
    15121 caggaagaac aaagctgcat ccggtgtagc gcctgtgctg acgcctgccc tgcggatctt
    15181 ttgccgcaac agttgtactg gttcagcaaa ggtcagcaac acgataaagc taccacgcat
    15241 aacattgctg attgcattga atgtggggct tgcgcgtggg tttgcccgag caatattccc
    15301 ctggtgcaat atttccgtca ggaaaaagct gaaattgcgg ctattcgtca ggaagaaaag
    15361 cgcgccgcag aagccaaagc gcgtttcgaa gcgcgccagg ctcgtctgga gcgcgaaaaa
    15421 gcggctcgcc ttgaacgaca taagagcgca gccgttcaac ctgcagccaa agataaagat
    15481 gcgattgctg ccgctctggc gcgggtgaaa gagaaacagg cccaggctac acagcctatt
    15541 gtgattaaag cgggcgaacg cccggataac agtgcaatta ttgcagcacg ggaagcccgt
    15601 aaagcgcaag ccagagcgaa acaggcagaa ctgcagcaaa ctaacgacgc agcaaccgtt
    15661 gctgatccac gtaaaactgc cgttgaagca gctatcgccc g
//
LOCUS       DAPGWB010000102        15556 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.103, whole genome shotgun sequence.
ACCESSION   DAPGWB010000102 DAPGWB010000000
VERSION     DAPGWB010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15556
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.103"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(299..1210)
                     /gene="gsiD"
                     /locus_tag="RHX79_003110"
     CDS             complement(299..1210)
                     /gene="gsiD"
                     /locus_tag="RHX79_003110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiD"
                     /protein_id="HDV2198255.1"
                     /translation="MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAA
                     LFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ
                     ISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
                     GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGT
                     VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPA
                     LAIFLTVLAFNLLGDGLRDALDPKIKG"
     gene            complement(1213..2133)
                     /gene="gsiC"
                     /locus_tag="RHX79_003111"
     CDS             complement(1213..2133)
                     /gene="gsiC"
                     /locus_tag="RHX79_003111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiC"
                     /protein_id="HDV2198256.1"
                     /translation="MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEAD
                     AQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLT
                     ITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELG
                     WLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWV
                     VLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQA
                     EILLFSLEFILINLVVDVLYAAINPAIRYK"
     gene            complement(2151..3689)
                     /gene="gsiB"
                     /locus_tag="RHX79_003112"
     CDS             complement(2151..3689)
                     /gene="gsiB"
                     /locus_tag="RHX79_003112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter substrate-binding
                     protein GsiB"
                     /protein_id="HDV2198257.1"
                     /translation="MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPY
                     DANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGLTYTVKLREGIKFQDGT
                     DFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAH
                     PATAMISPAALEKYGKEIGFHPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSI
                     TWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVT
                     QKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKA
                     RELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEV
                     EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQ
                     ALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFED
                     ADLQ"
     gene            complement(3709..5580)
                     /gene="gsiA"
                     /locus_tag="RHX79_003113"
     CDS             complement(3709..5580)
                     /gene="gsiA"
                     /locus_tag="RHX79_003113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter ATP-binding protein
                     GsiA"
                     /protein_id="HDV2198258.1"
                     /translation="MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGET
                     LAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQSAAQMRHVR
                     GADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQT
                     ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM
                     SMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLG
                     AMKGLDYPRRFPFISLEHPAKQAPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVT
                     REVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLS
                     PGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKEAAARVAWLLERV
                     GLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLD
                     LQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAA
                     VPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR"
     gene            complement(5567..6532)
                     /gene="iaaA"
                     /locus_tag="RHX79_003114"
     CDS             complement(5567..6532)
                     /gene="iaaA"
                     /locus_tag="RHX79_003114"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HDV2198259.1"
                     /translation="MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLE
                     AGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSH
                     LRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTPLRYEQLLAARKEG
                     ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGC
                     YANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGG
                     LIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ"
     gene            6736..7971
                     /gene="moeA"
                     /locus_tag="RHX79_003115"
     CDS             6736..7971
                     /gene="moeA"
                     /locus_tag="RHX79_003115"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDV2198260.1"
                     /translation="MEFTTGLMSLDTALNEMLSRVTPLTSQETLPLVQCFGRILASDV
                     VSPLDVPGFDNSAMDGYAVRLADIASRQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGA
                     PVPEGCEAVVMQEQTEQTDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTSAE
                     LPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGC
                     EVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKL
                     AIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVR
                     TASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGN
                     VDVGEWVEVEPFNALFGGL"
     gene            7971..8720
                     /gene="moeB"
                     /locus_tag="RHX79_003116"
     CDS             7971..8720
                     /gene="moeB"
                     /locus_tag="RHX79_003116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HDV2198261.1"
                     /translation="MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLVVGLGGLGC
                     AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARYALTRINPHIA
                     ITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ
                     ITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAGYGKP
                     ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ"
     gene            complement(8899..9561)
                     /gene="fsa"
                     /locus_tag="RHX79_003117"
     CDS             complement(8899..9561)
                     /gene="fsa"
                     /locus_tag="RHX79_003117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HDV2198262.1"
                     /translation="MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLP
                     QLHEAMGGQGRLFAQVMATTAEGMVNDARKLRSIIADIVVKVPVTAEGLAAIKMLKAE
                     GIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQA
                     KVLAASFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWLGAFGRT
                     SI"
     gene            9692..10591
                     /locus_tag="RHX79_003118"
     CDS             9692..10591
                     /locus_tag="RHX79_003118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415345.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HDV2198263.1"
                     /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDL
                     LYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGE
                     VKSVEEIMTTVLRDKPFYDRSGGGLTLSGGEPFMQPEMAMALLQASHEAGIHTAVETC
                     LHVPWKYIAPSLPYIDLFLADLKHVADAPFKQWTDGNAARVLDNLKKLAAAGKKIIIR
                     VPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLD
                     APELLDFAQQYACQKGLTATLRG"
     gene            10597..13029
                     /locus_tag="RHX79_003119"
     CDS             10597..13029
                     /locus_tag="RHX79_003119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl radical protein"
                     /protein_id="HDV2198264.1"
                     /translation="MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHL
                     NKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDL
                     ADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT
                     SGDAHLAVNFPLLLEKGLDGLREKVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSE
                     HIERFAALAREMAATETRESRRDELLTMAENCDLIAHQPPQTFWQALQLCYFIQLILQ
                     IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIEMLHSCWLKLLEVNKIRSGSH
                     SKASAGSPLYQNVTIGGQNLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM
                     SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW
                     GYRCTGMSFINFARVMLAALEGGRDATSGKVFLPQEKALSAGNFNNFDEVMDAWDTQI
                     RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI
                     ANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDT
                     VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRK
                     AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQK
                     LMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDA
                     QDDIIARTEHML"
     gene            13175..13990
                     /gene="ybiV"
                     /locus_tag="RHX79_003120"
     CDS             13175..13990
                     /gene="ybiV"
                     /locus_tag="RHX79_003120"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase YbiV"
                     /protein_id="HDV2198265.1"
                     /translation="MSVKVIVTDMDGTFLNDAKTYNQPHFMAQYQELKKRGIKFVVAS
                     GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL
                     NFVACGLQSAYVSENAPEAFVALMAKHYHRLKAVKDYQEIDDVLFKFSLNLPDEQIPL
                     VIDKLHIALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN
                     DAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS"
     gene            14142..15407
                     /locus_tag="RHX79_003121"
     CDS             14142..15407
                     /locus_tag="RHX79_003121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1479 domain-containing protein"
                     /protein_id="HDV2198266.1"
                     /translation="MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIA
                     TRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGW
                     DQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQAQMQARQSEEMANAQS
                     FLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ
                     RVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL
                     HVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAG
                     DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFP
                     REDYETNWEGRFTLADLNIHGKRALGMDV"
BASE COUNT         3777 a         4293 c         3952 g         3534 t
ORIGIN      
        1 ttaccgcgcg ttccgatacc agttgatagt taatgatgaa aaaaagacca ataaatgaca
       61 gtgctgccaa taaaaataaa attatcagcc ttatctttat cttttcgtat aaactcagca
      121 tgttaataca tttaacaaaa taactatctg aacgctgtgc cgctgcaaaa atagtccctt
      181 gctgcggctt tttaaccaaa ttacccgatt ctacaaaatc agcagaaagt tacaacactt
      241 gcttagggca ataattgcct gtgaggtgat taccctttca agcaatattc aaacgtaact
      301 atcctttaat tttcggatcc agcgcatcgc gtaaaccatc gcccaacaaa ttgaacgcca
      361 gtacggtcag aaaaatagcc agggccggaa aaacagcgac atgcggcgcg ataaccatat
      421 ccgctcgtgc ctcattgagc attgctcccc actctggtgt cggcggctgc gcaccgaggc
      481 cgagaaatga caggctggcg gcagagataa tcgaggtgcc aatgcgcatg gtgaaaaaca
      541 ccacgataga cgagacggtc ccaggcaaga tatgacgcaa taaaatggtc atatcgctgg
      601 caccaatact gcgtgctgac tcaataaagg tttgctgttt caacaccagc gtgttgccgc
      661 gcaccaggcg ggcaaacgcg gggatggaaa aaatggcgac tgcgataatc acgttagcaa
      721 tgccgcttcc caacaccgca acaacagcga tcgccagtaa aatacccggg aaggcaaaca
      781 gcacatcgca aatgcgcatg atcagccgat cccaccagcc ttcataatat ccagccagca
      841 agcccagcaa cgtccctatc gccgcaccga taaacacggc aaacacgccc gccgccagcg
      901 agatttgcgc accaaccagg acacggctga aaatgtcgcg ccccagtgaa tcgacgccaa
      961 accagtgctg caaagaaggt ccgttattca gattgtcata atcaaaataa ttttcggcgt
     1021 catagggagc gatccagcgt gcaaaaatgg ccaccacaat caataaaata acgaataatg
     1081 cggcggtcat cgccatatgc tgacggcgaa atcgtcgcca gaattcatgc cacggtgtac
     1141 gcacctggtc aggtttgacc agtggcatgg cgtttaacac cgcctgacgt cgccagttaa
     1201 atagtcgcat ccttacttgt acctgatagc cgggttaatg gcggcgtaaa gcacatccac
     1261 cactaagttg ataagaataa attccagcga gaaaagcaga atttccgcct gaatcaccgg
     1321 gtaatcgcgc atttctacgg agtcaacgag taagcgtcca agtccgggcc agttgaaaac
     1381 tttctccacc acgatagaac caccgagcaa aaagccaaac tgtaagccca tcatggtcac
     1441 taccgggatc atcgcgttac gtagcccgtg tttgaggaca acccaggttt cgctcacccc
     1501 tttcgccctc gcggtacgca tataatcttc gcttaaaaca tcgacaaacg acgcgcgggt
     1561 aaagcgcgcc atcacggctg ccactgccgc gccgagcgtc agggagggta aaatgtagtg
     1621 ctgccaactg tctgctccca cggtaggcag ccagcccagt tcaacggaga atacctgaat
     1681 taaaagcatc cccagcgcaa atgccggaaa cgagatcccc gacaccgcaa tggtcatact
     1741 caatcgatcc ggccaacgat tacgccagac ggcggcgata attcccgccg ccataccaaa
     1801 tatcaccgcc cagaccatac tggttatggt cagccacagc gttggcataa agcggctggc
     1861 aatctcatcg gcaaccggac gacgcgacac catcgacagg ccaaaatccc cctgcacagc
     1921 attgctgata tagtgccaga actggtgata cagcggctga tccaacccca gctgctgacg
     1981 caccagttct ataacctgcg catcagcttc gggcccggca atcaatcgcg ccggatcgcc
     2041 gggcagcata tgcacaaata aaaacaccag caccgagacg ataaacagcg tcggaatcaa
     2101 ccccagtaat cgtttgataa cgtaattaag cattccactc cctgcgttgc ttattgcaaa
     2161 tccgcgtctt caaagctgaa gccggtgtct ggcatgatcc aaaaaccggt caggttttta
     2221 ctgtgtgccg acaccagttt ttctaccacc agcgggatcc acggcgactc ttgccagatg
     2281 atatcctgcg ccgccttata caagcgggtc ttttccgccg gatcattagt tttcagtgcc
     2341 tgagccagga agtcatccac ctgtttattg ctgtaaaacg cggtattaaa cagcgtcggt
     2401 ggccagtttt gcgaggcaaa caacggcgat agtgcccagt cggcttcgcc ggttgaagcc
     2461 gaccagccag tgtagaacat ccgcacgccg ctctcttttt gccctttacc ttcaacttct
     2521 gccgcccgct gtccggcatc catcgcagtc acctgggctt taatcccgac ctgcgctaac
     2581 tgctgctggg taaattgcag cactttctgc gcggtgctgt ggttatgtga cgaccacagc
     2641 gtggtactga aaccgttggg atatcccgcc tctttcagta attcgcgcgc tttcactgga
     2701 tcgtaaggcc acggtttata actttgcgcg taggcgatac ttggcggtac cacaccagta
     2761 gctggcgttg catagcccgc aaaggcaact ttcaccagcg ccggacggtt aatggcgtaa
     2821 ttcagcgcct cacggacctt cgggttatcg aacggctttt gcgtcacgtt catactgata
     2881 taacgctgca taattgacgg actggccatc aactcgatat ttttgttttt ctccagcagt
     2941 gtggcctgct cgtagggaat ggggaaagca aactgcgctt caccggtttg cagcattgcc
     3001 gcgcgggtgt tgttatccgc caccggacgc caggttatgc tgtccagttt gggcaatcct
     3061 ggctgccagt aacccgcgaa ttttttcacc ttcacaaaat cggtctgatt ccaggtatcc
     3121 agttcatacg gtccggttcc caccggatga aaaccaatct ccttgccata tttttccagc
     3181 gctgccggtg aaatcatcgc ggtcgccgga tgggcaagaa tattaataaa cgctgagaac
     3241 ggctgtttga gagtaatctt tactgttgtt ggatcgatcg cctccgtttt ggcaatattc
     3301 ttatacaggt tatagcgttt aagatgattc gccggatcgc tggcccggtc cagattcgct
     3361 tttaccgccg ctgcgttgaa atcggtgcca tcctggaatt taattccttc ccgcaatttc
     3421 acggtgtatg taaggccgtc atcggaaacg gtataactct ccgccagcac gtttttcagt
     3481 ttcatctctt tatccagacc aaacagcccc tggtaaaacg atttcgctac ggcctgagat
     3541 aacgtgtcat ttgcgtcata cggatcgagc gtggtgaagt tcgatcctac cgccaccacc
     3601 acatctttgg cagcgaatgc acaagatgcc atcaacgctg tcgcaatgcc caacgccact
     3661 aacccactac ggtgtacagc tcttgccatt ttattctccg cctgaatgtt atctacgcat
     3721 gaatgcgtat tctgattgtg gttgtgcgac gtaatgcccc ggcccgacgc attgcaacga
     3781 gacggctgcc acctcttcgc cacgcagatg aatattgctg ggaagatcgt ccgacagcag
     3841 tacacgctgc ggtcgttgtc gggacggttc agcgaccgga actgccgcca gtaatttacg
     3901 cgtataagga tgctgcgggt tttcgaagac cgcgcgccgt ggaccaattt caacaatttg
     3961 tccgagatac atcaccgcca cacgatgact aatccgctct accacggcca tatcgtggga
     4021 gataaacaga tacgcaatgc cgaaatcacg ctggagatcg agcaacaagt tgataatctg
     4081 cccgcgaata gaaacatcca gcgccgagac ggcttcgtcg gcaatgatca ctttcggatt
     4141 caatgccaac gcgcgagcaa tgcagatgcg ctggcgctga ccgccggaaa actcatgcgg
     4201 gtaacgccag gcatgttcag gtaacaggcc cacgcgctcc agcaaccacg caacgcgtgc
     4261 agccgcttct ttacctggca ataaaccgtg tacacgcagc ggttcgataa tcgaatcacc
     4321 gatggtctga cgtgggtcca gcgaagcgta agggtcctga aaaataaact gaatatcccg
     4381 gcgcaatgcc tgaagtttgc cgggtgacaa ggtatcgatt ctctgaccgt taaagataat
     4441 ttcgccgccc tgcgattcga ccaggcgcag caacgcccgc ccggtagtgg atttaccgct
     4501 gccagactcg cccaccagcg atagcgtttc gccaggccag agatcaaaac tgactttctc
     4561 aacggcatgc acttcccgcg ttacgcgatt caacaaaccg ctgcgcaaag ggaaacgggt
     4621 gacaagatta cgcactcgta aaacaggttc gccatccacc accgttttct gctcgatggg
     4681 gggggcctgt ttcgctggat gttcaagcga tataaacggg aaacgtcggg gataatctaa
     4741 ccctttcatc gcaccaagtt gcggaacagc agctaacagc gcacgggtgt aaggatgttg
     4801 cggtgcatga aaaatctgtt cgacggtacc cgtttccacc gcctcgccct gatacatcac
     4861 cagtacccga tcggcaatct ctgccaccac gcccatatcg tgagtgataa agataacgcc
     4921 catcgacatc tctttttgca atactttgat taattgcagg atctgcgcct gaatagtgac
     4981 atccagcgcg gtggttggct catcggcaat cagcaccgcc gggcggcatg acagcgccat
     5041 cgcaatcatc actcgctggc gcatcccgcc agagagttga tgcggataac gtgaaagaat
     5101 ggtttgtgcc tcaggaatgc gtacctgatc cagcatccgc ttcgcctcga ccatcgcttc
     5161 ttcacgactg gcgttctgat gcagacgaat tgattcggca atctgttcac ccacagtaaa
     5221 taccgggttc agcgatgtca tcggctcctg aaatatcatc gccatatccg caccgcgaac
     5281 atggcgcatt tgtgcagcgc tctgctcgct aagttcaatc acttcgcgac tgcgccgctg
     5341 caacagcatt ttatcgcact gtactaaacc gcccgcctgt tccaacaggc gcatcaatgc
     5401 caacgcagtc actgacttac cggagccgga ttcgccaaca attgccagcg tctcaccgcg
     5461 ttgcagacta aaagagagat tgcggaccgc agctattttc tgctggtcct gcataaaggc
     5521 aatattcaga ttttcaaccg ccagcacatt accggcatca agttcatcac tgtgtggcaa
     5581 cggtgtcccc tttttcacgg tagataccgg tggttggcgt atcgcctgcg tagccccagg
     5641 cgcgatacat tccttcggtg ttaaacggta gcgcgacatt cccttcatgg tcgatagcga
     5701 ttaagccacc gctaccgcca agcgcaggga gtttttccat tactacccgc tcgcaggctt
     5761 ccgcgagact taatccgccg taatccatta acgcggcgat gtcatatgcc gccagcgcgc
     5821 ggatgaagac ttcgcccgtg ccggtacaag aaaccgccac actggcgtta ttggcgtagc
     5881 atccggcacc cactaaggga ctatcgccaa ctcgtccggg taatttattg gtcattccgc
     5941 ctgtggacgt ggctgccgcc aaattgccgt ctaaatccaa cgccacggcc cccacggtgc
     6001 ccattttctg tttttcatcc agtggcgcac cgctatggtc gaggacggtt gccccttcct
     6061 tgcgcgctgc cagtagttgt tcataacgca aaggcgtgga gaaaatctcc ggcgagacgc
     6121 gctccatgcc acgagcaaac gcaaaatttt ctgccccttc gccaatcatc atcacatgcg
     6181 ggctttgctc catcaccagc cgggcggcaa gaaccggatt acgcagatga ctaacgcccg
     6241 ccaccgcacc ggctttcagg gtgttaccat ccatcacaca ggcgtccagt tcatgggttt
     6301 catcacgcgt aaagacagcg ccaattccgg cgttaaacag tggacactct tccagcagac
     6361 gcaccgcttc cgtcaccaca tccagcgcac tttcgcccgc ttccagcatt ttctgcccgg
     6421 tttcaacaat ggcagacaac gcctcaatgt agcgtaattc ctgttgcaga ctcatctgcg
     6481 cgcggctaat tgcacctgcg ccaccatgaa ttgcaatgac tgctttgccc atagtattcg
     6541 tccattaagg gtggctcgcc acttttgcta taaatatcag aatttttatg aattactcat
     6601 tcaatttttg aatatagaaa gatggatatg gcatgtaaag gcaggaccca gcgctacgcc
     6661 cgaggtggca tacagtctgt ggcgtttttc tgacataata ggcaaattcg attttgcctc
     6721 cgcaggagtg ttttcatgga atttaccacc ggattgatgt cgctcgacac cgcgcttaat
     6781 gagatgcttt ctcgcgtcac cccactgacc tcccaggaaa cgctgccact ggtacagtgt
     6841 tttggtcgta ttctggcgag cgatgtcgtt tcgccgcttg atgttccggg gtttgataac
     6901 tccgcaatgg acggctacgc ggtgcgttta gccgatattg cctccaggca accgctgccc
     6961 gttgccggta aatcctttgc cggtcagccg taccatggtg aatggcctgc gggtacctgc
     7021 attcgtatta tgaccggtgc gccggtgccg gaaggctgcg aagcggtggt gatgcaggag
     7081 cagactgaac aaacggacaa tggcgtgcgt tttactgctg aagtgcgtag cgggcaaaat
     7141 attcgccgtc gcggtgaaga tatctctgca ggtgcggttg ttttcccggc gggaactcgc
     7201 ctgactagcg ctgaactgcc agtgattgct tcactgggga ttgccgaagt tccggtgatt
     7261 cgtaaagtgc gtgtagcgct tttttctacc ggtgatgaac tccagttgcc cggtcagcca
     7321 ctgggcgatg gccaaatcta cgataccaac cgtctcgccg tacacctgat gttagaacag
     7381 ttgggatgcg aggtaatcaa cttagggatt atccgcgacg atccacatgc cctgcgcgcc
     7441 gcatttattg aagccgacag ccaggcggat gtggtgatca gttccggcgg tgtttcagtg
     7501 ggtgaagcgg attacaccaa aaccattctt gaagagctgg gggagatcgc cttctggaag
     7561 ctggcgatta aaccgggtaa accgttcgcg ttcggtaaac tttctaatag ctggttctgc
     7621 ggcctgccgg gcaacccggt ttcagcgacg ctgaccttct atcaactggt acagcctttg
     7681 ctggcaaaac taagcggcaa caccgccagc ggcctgcccg cgcgccagcg cgtacgcaca
     7741 gcgtcccgcc tgaaaaaaac gccaggacgt cttgatttcc agcgcggcgt gctgcaacgc
     7801 aacgccgacg gtgaacttga agtgacgacc accggacatc agggttcaca tatatttagc
     7861 tcctttagtc tcggcaactg ctttatcgtg ctggaacgcg atcgcggcaa tgtggacgtg
     7921 ggcgaatggg tggaagtaga accgtttaac gcgttgttcg gaggcctgta atggcggaac
     7981 tcagcgatca ggagatgctg cgctacaacc ggcaaatcat tctgcgcggt tttgattttg
     8041 acggtcagga ggcgctaaaa gattctcgtg tgctggtagt cggcctcggt ggactcggct
     8101 gcgcagcttc gcagtatctg gcaagcgccg gtgtcggcaa cctgacgctg ctcgacttcg
     8161 acacggtttc gctctcgaat ctgcaacgcc agacgctgca cagtgatgct acggtcgggc
     8221 aaccgaaggt ggaatccgcc cgttacgccc tgacgcggat caacccacat atcgcgatta
     8281 cgccagtcaa tgcactgcta gatgacgcag aacttgcagc attgattgct gaacacgatc
     8341 tggtgctcga ctgtacggat aacgttgcgg tacgtaatca actgaacgca ggctgttttg
     8401 ccgcgaaggt gccgctggtt tccggcgcgg caattcgtat ggaagggcaa atcacggtct
     8461 tcacttatca ggacggcgaa ccgtgctatc gctgccttag ccgtttgttt ggcgagaacg
     8521 cattaacctg cgtagaagca ggcgtgatgg caccgttgat cggcgtaatt ggttcgttgc
     8581 aggcaatgga agcgatcaaa ctgctggcag gttatggcaa accggccagc gggaaaatcg
     8641 tcatgtacga tgcgatgacc tgtcagtttc gcgaaatgaa actgatgcgc aatccggggt
     8701 gtgaggtgtg cgggcagtaa ttgccacctc caggcctgat aagacgcgac aagcgtcgca
     8761 tcaggcattt gctccagacg ccagatgcgg cgtgaacgcc ttatctggcc tacggttcgg
     8821 gcacagattt ccaagcgcgg caggcatcgg tgcactccgc cacgtcatca gcaatttatg
     8881 aggatgcaga acgtccggtt aaatcgacgt tctgccaaac gctcccagcc agtcctgttc
     8941 aaacttcgcc acagcggcat caaccgccgg atagctaatc atctgttgtg ccacatccag
     9001 tggcagcgta attgattcac atcctgccag taagcagtcc agcgcctgac gcggggtttt
     9061 gaaactcgct gccagcactt tcgcctgcgg cgcatgcatt ttcaataact ggtgtaagtc
     9121 ggtcacagtc tgaatgccgc taccgccctg agcatcaata cgattaacgt aaggcgcaac
     9181 atattccgca cctgccagcg ccgacagcag cccttgtgct gcgccatata ccgcggttcc
     9241 cagcgttgga atcccttccg cttttaacat cttaatagct gccagcccct cggcggtcac
     9301 cggaactttc accacgatat ccgcaataat agaacgcaat ttacgtgcgt cattcaccat
     9361 cccttcagca gtggtagcca ttacctgggc aaacagacgc ccctgaccgc ccatcgcttc
     9421 atgaagttgc ggaagcacaa catccagcgg ttttttaccc gcggcgataa tgcttgggtt
     9481 agtggtcaca cccgccagcg gaaaaatacg tgacagcgcc ttcaccgcaa caacgtctga
     9541 agtatccaga tacagttcca taaccatcct caaaatgtac tttttgtctg aatgtagact
     9601 atcacgggaa aactctctga acagttgacg tacatcaatc taactttcat tcgaaagtat
     9661 tttaatgttt gaacgaaaca gagaggcaac tatgattttc aatattcagc gctactcgac
     9721 ccatgatggc cccggtatcc gcacggtcgt atttcttaaa ggctgttcgc tgggctgccg
     9781 ctggtgtcag aacccggaaa gccgcgcccg cacgcaggat ctgctgtatg acgcacgact
     9841 gtgtctggaa ggctgcgagc tgtgcgctaa ggccgcgccg gaagtgattg agcgcgcgct
     9901 gaatggtttg cttattcatc gggaaaagtt aaccccggag catctgacgg cgttaaccga
     9961 ctgctgtccg acacaggcat taaccgtgtg tggtgaagtg aaaagcgttg aggagatcat
    10021 gacgaccgtt ctgcgcgata aaccgtttta tgatcgcagc ggcggcggtt taacgctttc
    10081 gggtggtgag ccctttatgc agccggaaat ggcgatggcg ctactgcaag ccagccacga
    10141 ggcaggcatt catactgcgg tagaaacctg tctgcatgtg ccgtggaaat atatcgcccc
    10201 ttctctgccc tatatcgatc tgtttcttgc cgatttaaaa cacgttgccg acgcgccgtt
    10261 taaacagtgg accgacggta acgccgccag agtgctggat aacctgaaaa aactcgccgc
    10321 agcgggcaaa aaaatcatta tccgcgtgcc gctgattcag ggctttaatg ccgacgaaac
    10381 ctctgtaaaa gccattaccg attttgccgc cgacgagctg cacgttggcg aaattcattt
    10441 tctgccctac cacacgctgg gcatcaacaa atatcactta cttaatctgc cctatgacgc
    10501 cccggaaaaa ccgcttgatg cgccagaact gctcgacttt gcccagcagt atgcctgcca
    10561 gaaagggtta accgcgacct tacgaggata acaaccatga ccacactgaa actggacacg
    10621 ctcagcgacc gcattaaagc gcacaaaaat gcgctggtgc atattgtgaa accgccagtc
    10681 tgtaccgagc gcgcgcagca ctataccgag atgtatcaac aacatctcaa taagccgatc
    10741 ccggtacgtc gcgcgctggc actggcgcat cacctggcga atcgcaccat ctggatcaaa
    10801 cacgatgagt tgatcattgg caaccaggca agcgaagttc gcgccgcgcc gatcttcccg
    10861 gaatatactg tctcgtggat cgaaaaagag attgatgatc tggcagatcg tcccggtgct
    10921 ggctttgcgg tgagcgaaga gaacaaacgc gttctgcatg aagtgtgccc gtggtggcgc
    10981 ggtcagaccg tacaggatcg ctgctacggc atgtttaccg atgagcaaaa aggtctgctg
    11041 gcgaccggaa tcattaaagc ggaaggcaat atgacctccg gcgatgcgca cctggcggtg
    11101 aatttcccgc tgctgctgga aaaaggtctt gatggtctgc gtgagaaagt agcggaacgt
    11161 cgctcgcgca tcaatctgac ggtgctggaa gatttacatg gcgaacaatt cctgaaagcg
    11221 attgatatcg tgctggtggc agtcagtgaa cacattgaac gtttcgctgc cctggcgcgt
    11281 gaaatggctg ctaccgaaac tcgcgaaagc cgtcgcgatg aactgctgac gatggcagaa
    11341 aactgcgatc ttatcgccca ccagccgccg cagactttct ggcaggcgct gcaactgtgt
    11401 tacttcatcc aattgatttt gcagatcgaa tctaacggtc actcggtatc gtttggtcgt
    11461 atggaccagt atctctaccc gtactatcgc cgcgacgttg aactcaacca gacgctggat
    11521 cgcgaacacg ccatcgagat gctacatagc tgctggctga aactgctgga agtgaacaag
    11581 atccgctccg gctcacactc aaaagcctct gcgggaagtc cgctgtatca gaacgttacc
    11641 attggcggac aaaatctggt tgatggtcaa ccaatggatg cagtgaatcc cctctcttac
    11701 gcgatcctcg aatcctgcgg tcgcctgcgt tccactcagc ctaacctcag cgtgcgttac
    11761 catgcaggaa tgagtaatga tttcctcgac gcctgcgtac aggtgatccg ttgcggcttc
    11821 gggatgccgg cgttcaacaa cgacgaaatc gtgatcccgg aatttattaa actcggtatt
    11881 gaaccgcagg acgcttacga ctacgcagcg attggttgta tcgaaaccgc cgtcggtggc
    11941 aaatggggct atcgctgtac cggcatgagc tttatcaact tcgcccgcgt gatgctggcg
    12001 gcgctggaag gcgggcgtga tgccaccagc ggcaaagtgt tcctgccaca agaaaaagcg
    12061 ttgtcggcag gcaactttaa caatttcgat gaagtaatgg acgcgtggga tacgcaaatc
    12121 cgttattaca cgcgtaaatc aatcgaaatc gaatatgtcg tcgacaccat gctggaagag
    12181 aacgtacacg atattctctg ctcggcgctg gtggatgact gtattgagcg agcgaaaagt
    12241 atcaagcaag gcggcgcgaa atatgactgg gtttctggcc tgcaggttgg cattgccaac
    12301 ctcggcaaca gcctggcggc agtgaagaaa ctggtatttg aacagggcgc gattggtcag
    12361 caacagctgg ctgccgcact ggcggatgac ttcgatggcc tgactcatga gcaactgcgt
    12421 cagcggctga ttaacggtgc gccgaagtac ggcaacgacg atgataccgt cgatacgctg
    12481 ctggctcgcg cttatcagac ctatatcgac gaactgaaac agtaccataa cccgcgctac
    12541 ggtcgtggtc cggttggcgg caactattac gcgggtacct cgtctatctc cgctaacgta
    12601 ccgtttggcg cgcaaactat ggcaacaccg gacgggcgta aagcccacac cccgctggca
    12661 gaaggcgcaa gcccggcttc cggtactgat catcttggcc ctactgcggt cattggctcg
    12721 gtgggtaaac tgcctacggc agcgattctc ggcggcgtgt tgctcaacca gaaactgaat
    12781 ccagcaacac tggagaacga atctgacaag cagaaactga tgatcctgct gcgcaccttc
    12841 tttgaagtgc ataaaggctg gcatattcag tacaacatcg tttcccgcga aacgctgctg
    12901 gaggcgaaaa aacatccgga tcagtaccgc gatctggtag tgcgtgtcgc gggctattcc
    12961 gccttcttca ccgcgctctc tccagacgca caggacgata tcatcgcccg tactgaacat
    13021 atgctgtaat ctcctcggcc cggcggcgtc gtcgccgggc taaatcattc acatcatcaa
    13081 tttcatcctt actttcattc gaaatataat ttgtgctctg cgtcacattg ttattacact
    13141 gttacggttt cattttcgag ccaggagcac acctatgagc gtaaaagtta tcgtcacaga
    13201 catggacggt acttttctta acgacgccaa aacgtacaac caaccacatt ttatggcgca
    13261 atatcaggaa ctgaaaaagc gcggcattaa gttcgttgtc gccagcggta atcagtatta
    13321 ccagcttatt tcgttctttc ctgagctaaa ggatgagatc tcttttgtcg cggaaaacgg
    13381 cgcactggtt tacgaacatg gcaagcaact gttccacggc gaactgaccc gacatgaatc
    13441 gcggattgtt attggcgagt tgctaaaaga taagcaactc aattttgtcg cctgcggtct
    13501 gcaaagtgca tatgtcagcg aaaatgcccc cgaagcattt gtcgcactga tggcaaaaca
    13561 ctaccatcgc ctgaaagctg taaaagatta tcaggagatt gacgacgtac tgttcaagtt
    13621 ttcgctcaac ctgccagatg aacaaatccc gttagtgatc gacaaactgc acatagcgct
    13681 cgatggcatt atgaaacccg tcaccagtgg ttttggcttt atcgacctga ttattcccgg
    13741 tctacataaa gcaaacggta tttcgcggtt actgaaacgc tgggatctgt caccgcaaaa
    13801 tgtggtagcg attggcgaca gcggtaacga tgcggagatg ctgaaaatgg cgcgttattc
    13861 ctttgcgatg ggcaatgctg cggaaaacat taaacaaatc gcccgttacg ctaccgatga
    13921 taataatcat gaaggcgcgc tgaatgtgat tcaggcggtg ctggataaca catccccttt
    13981 taacagctga cctctctacc ggagccgtgc gctccggttt tcccttcttt ttacatcctg
    14041 tacatcacat caaatcatta aacttgcatt aacttattta taacttatat tgtcacatgc
    14101 aaatcatcag agtttcgaat gaaagttaat gcgaggtggt tatggcttct acttttacca
    14161 gcgacacatt gcctgccgat cacaaagcag ctatccgtca gatgaagcac gcgctgcggg
    14221 cgcagcttgg cgacgtccag cagatcttta atcagctaag cgatgacatt gccacgcgag
    14281 tggctgaaat caacgcactc aaagcacagg gcgatgccgt ctggccggtg ctgtcttatg
    14341 ccgatatcaa agcaggtcat gttactgcag agcagcgcga acagattaaa cgtcgcggtt
    14401 gtgcggtgat aaaaggccat ttcccccgcg aacaagcgct aggctgggat cagtcgatgc
    14461 tggactatct ggaccgcaac cgctttgacg aggtctacaa aggccccggc gataatttct
    14521 tcgggacgct cagcgcttca cgtcccgaga tttaccccat ctactggtcg caggcgcaaa
    14581 tgcaggctcg ccagagtgaa gaaatggcga atgcgcagtc gtttctcaat cgtctgtgga
    14641 catttgaaag tgatggaaag caatggttta acccggatgt gagcgtcatc taccctgacc
    14701 gtatccgccg ccgtccgccc ggaacgacct ccaaaggtct tggagcgcat accgactccg
    14761 gggcactgga acgctggctg cttccagcgt atcagcgcgt tttcgccaac gtctttaatg
    14821 gcaatctggc gcaatatgat ccctggcatg cggcacatcg tacggaagtt gaagagtaca
    14881 cggtggacaa caccaccaaa tgttccgtgt ttcggacatt ccagggctgg acagcgctct
    14941 ctgatatgct gcctggtcag gggctgctgc acgtcgtgcc cattcctgaa gccatggcgt
    15001 acgtactgtt acgtccgctg cttgatgatg tgccggagga tgaactgtgc ggcgtagcgc
    15061 ccggaagagt attgccggta tcagagcaat ggcatccact gttgattgag gcgttaacca
    15121 gcattccaaa actcgaagcc ggagactccg tctggtggca ctgcgacgtc atccattccg
    15181 ttgcccccgt tgaaaatcaa cagggctggg gcaacgtgat gtacattcct gcggcaccga
    15241 tgtgcgagaa aaatcttgcc tacgcgcaca aggtgaaggc cgcactggaa aaaggcgcat
    15301 cgccgggcga cttcccgcgc gaggactatg aaacaaactg ggaaggacgc tttacgcttg
    15361 ccgacctcaa cattcacggt aagcgagcgt tgggcatgga tgtttgagag ttaatggaag
    15421 tgaattgatg tgggattaag aaaatcgatt cgacgttact cagattgctg acaagtgcgc
    15481 tttcttaatg cctgatgcgg cgttaacgcc ttatctggcc tacaaagtcc tgcagattca
    15541 atatattaca ggtact
//
LOCUS       DAPGWB010000103        15553 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.104, whole genome shotgun sequence.
ACCESSION   DAPGWB010000103 DAPGWB010000000
VERSION     DAPGWB010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15553
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.104"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            533..2164
                     /gene="oppA"
                     /locus_tag="RHX79_003122"
     CDS             533..2164
                     /gene="oppA"
                     /locus_tag="RHX79_003122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HDV2198267.1"
                     /translation="MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRN
                     NGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHL
                     RKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDL
                     GVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYT
                     LKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPI
                     ELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKA
                     QGDMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYN
                     TSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPT
                     SFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPV
                     YYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH"
     gene            2250..3170
                     /gene="oppB"
                     /locus_tag="RHX79_003123"
     CDS             2250..3170
                     /gene="oppB"
                     /locus_tag="RHX79_003123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HDV2198268.1"
                     /translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPE
                     VMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGA
                     AAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHW
                     LPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR
                     IILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGALTILFNAIVDVLYAVIDPKIRY"
     gene            3185..4093
                     /gene="oppC"
                     /locus_tag="RHX79_003124"
     CDS             3185..4093
                     /gene="oppC"
                     /locus_tag="RHX79_003124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000979653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HDV2198269.1"
                     /translation="MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLI
                     VLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGR
                     ISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
                     GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNV
                     LGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPA
                     GFLVVTLFCFNFIGDGLRDALDPKDR"
     gene            4105..5118
                     /gene="oppD"
                     /locus_tag="RHX79_003125"
     CDS             4105..5118
                     /gene="oppD"
                     /locus_tag="RHX79_003125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppD"
                     /protein_id="HDV2198270.1"
                     /translation="MSVIETTTVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNF
                     SLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLR
                     AEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARK
                     RMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF
                     NTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLD
                     AEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVE
                     ELL"
     gene            5115..6119
                     /gene="oppF"
                     /locus_tag="RHX79_003126"
     CDS             5115..6119
                     /gene="oppF"
                     /locus_tag="RHX79_003126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HDV2198271.1"
                     /translation="MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVT
                     LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSD
                     IQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINR
                     YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSL
                     IFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLE
                     KNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL
                     "
     gene            complement(6172..6501)
                     /locus_tag="RHX79_003127"
     CDS             complement(6172..6501)
                     /locus_tag="RHX79_003127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309775.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HDV2198272.1"
                     /translation="MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEE
                     RGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKL
                     CHIIWRE"
     gene            complement(6536..7996)
                     /gene="cls"
                     /locus_tag="RHX79_003128"
     CDS             complement(6536..7996)
                     /gene="cls"
                     /locus_tag="RHX79_003128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HDV2198273.1"
                     /translation="MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLII
                     YILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAP
                     LFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQ
                     VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRR
                     MDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIY
                     SCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAR
                     EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAG
                     VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQ
                     DDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL"
     gene            8139..8312
                     /locus_tag="RHX79_003129"
     CDS             8139..8312
                     /locus_tag="RHX79_003129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciY family protein"
                     /protein_id="HDV2198274.1"
                     /translation="MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILN
                     KQRNSLLFAIYNI"
     gene            complement(8367..9620)
                     /gene="kch"
                     /locus_tag="RHX79_003130"
     CDS             complement(8367..9620)
                     /gene="kch"
                     /locus_tag="RHX79_003130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated potassium channel protein"
                     /protein_id="HDV2198275.1"
                     /translation="MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVN
                     LLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIY
                     TLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALY
                     LSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMT
                     SIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP
                     EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKD
                     MSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLL
                     NSGHGIFSDNDEQETKADSKESVQK"
     gene            complement(9920..10216)
                     /locus_tag="RHX79_003131"
     CDS             complement(9920..10216)
                     /locus_tag="RHX79_003131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415767.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HDV2198276.1"
                     /translation="MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP
                     AVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF"
     gene            10440..11159
                     /gene="tonB"
                     /locus_tag="RHX79_003132"
     CDS             10440..11159
                     /gene="tonB"
                     /locus_tag="RHX79_003132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein TonB"
                     /protein_id="HDV2198277.1"
                     /translation="MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQP
                     ISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKP
                     VKKVQEQPKRDVKPVESRPASPFENTAPARPTSSTATAATSKPVTSVASGPRALSRNQ
                     PQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPG
                     KPGSGIVVNILFKINGTTEIQ"
     gene            complement(11199..11597)
                     /gene="yciA"
                     /locus_tag="RHX79_003133"
     CDS             complement(11199..11597)
                     /gene="yciA"
                     /locus_tag="RHX79_003133"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HDV2198278.1"
                     /translation="MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI
                     LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASE
                     PIGQRYKATEALFKYVAVDPEGKPRALPVE"
     gene            complement(11702..12241)
                     /locus_tag="RHX79_003134"
     CDS             complement(11702..12241)
                     /locus_tag="RHX79_003134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HDV2198279.1"
                     /translation="MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRF
                     RKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQ
                     RMLGKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
                     FTLLSGIYIYRHMPQEDKS"
     gene            complement(12271..13014)
                     /locus_tag="RHX79_003135"
     CDS             complement(12271..13014)
                     /locus_tag="RHX79_003135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0259 family protein"
                     /protein_id="HDV2198280.1"
                     /translation="MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPS
                     DAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVIL
                     IIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLAL
                     APVMLVQDKMGIFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEI
                     GAVLANTLSNLISAILLIYLFRLYMLIRQ"
     gene            complement(13042..13131)
                     /locus_tag="RHX79_003136"
                     /pseudo
     CDS             complement(13042..13131)
                     /locus_tag="RHX79_003136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460692.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            13371..14009
                     /gene="ompW"
                     /locus_tag="RHX79_003137"
     CDS             13371..14009
                     /gene="ompW"
                     /locus_tag="RHX79_003137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpW"
                     /protein_id="HDV2198281.1"
                     /translation="MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGG
                     TLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPP
                     TLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
                     VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF"
     gene            complement(14069..14575)
                     /locus_tag="RHX79_003138"
     CDS             complement(14069..14575)
                     /locus_tag="RHX79_003138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HDV2198282.1"
                     /translation="MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQ
                     HLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYV
                     FEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKQMADWLIQNIPQTTEKFLIRSE
                     TDGVEAKK"
     gene            complement(14621..15121)
                     /locus_tag="RHX79_003139"
     CDS             complement(14621..15121)
                     /locus_tag="RHX79_003139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HDV2198283.1"
                     /translation="MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAF
                     HAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAAL
                     IAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNK
                     KAENKA"
     gene            complement(15207..15386)
                     /locus_tag="RHX79_003140"
     CDS             complement(15207..15386)
                     /locus_tag="RHX79_003140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309858.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HDV2198284.1"
                     /translation="MAEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAG
                     KKGGQQSGGNKSGKS"
BASE COUNT         4154 a         3618 c         3747 g         4034 t
ORIGIN      
        1 tgaaatgata ttagtaattc cactgccttt ggtagaggaa agtgctaaat aacaatcaat
       61 tgttaaatta ttgtgcattt cactactgga actgtaatca gaaaagatag acatgcttag
      121 ccaatctcta tttgattgaa ttgaaagatg tttgttaagg catggatgca agctatagat
      181 tctgatacgg tcaataaaag agaattgctt aacaattttg caaaatgtat tggcgagtaa
      241 gaaccgcatt tggtactttc cgggcaaccg ccagacgatt ctttattggt aatgagaata
      301 attaacaatt aaagagcgtc gcgaaagaat aatgtgtctc gacaggggag acacagtacg
      361 aatcgacata aggtgatcgt ctgaatcacc agaataaata aagtcggtga tagtaatacg
      421 taacgataaa gtaacctgac agcagaaagt ctccgagcct gtgcagggtc ccaatccggg
      481 attacacatg ctggttaata ccagtaatta taatgaggga gtccaaaaaa caatgaccaa
      541 catcaccaag agaagtttag tagcagctgg cgttctggct gcgctaatgg cagggaatgt
      601 cgcgctggca gctgatgtac ccgcaggcgt cacactggcg gaaaaacaaa cactggtacg
      661 taacaatggt tcagaagttc agtcattaga tccgcacaaa attgaaggtg ttccggagtc
      721 taatatcagc cgagacctgt ttgaaggctt actggtcagc gatcttgacg gtcatccagc
      781 acctggcgtc gctgaatcct gggataataa agacgcgaaa gtctggacct tccatttgcg
      841 taaagatgcg aaatggtctg atggcacgcc agtcacagca caagactttg tgtatagctg
      901 gcaacgttct gttgatccga acactgcttc tccgtatgcc agttatctgc aatatgggca
      961 tatcgccggt attgatgaaa ttcttgaagg gaaaaaaccg attaccgatc tcggcgtgaa
     1021 agctattgat gatcacacat tagaagtcac cttaagtgaa cccgttccgt acttctataa
     1081 attacttgtt cacccatcaa cttcaccggt gccaaaagcc gctatcgaga aatttggcga
     1141 aaaatggacc cagcctggta atatcgtcac caacggtgcc tataccttaa aagattgggt
     1201 tgtaaacgaa cgaatcgttc ttgaacgcag cccgacctac tggaacaacg cgaaaaccgt
     1261 tattaaccag gtaacctatt tgcctattgc ttctgaagtt accgatgtca accgctaccg
     1321 tagtggtgaa atcgacatga cttataacaa catgccgatc gaattgttcc agaagctgaa
     1381 aaaagagatc ccggacgaag ttcacgttga tccatacctg tgcacttact attacgaaat
     1441 taacaaccag aaaccgccat tcaacgatgt gcgtgtgcgt accgcactga aactaggtat
     1501 ggaccgcgat atcattgtta ataaagtgaa agcgcagggc gacatgcccg cctatggtta
     1561 cactccaccg tatactgatg gcgcaaaatt gactcagccg gaatggtttg gctggagcca
     1621 ggaaaaacgt aacgaagaag cgaaaaaact gctggctgaa gcgggttata ccgcagacaa
     1681 accgttgacc atcaacctgt tgtataacac ctccgatctg cataaaaagc tggcgattgc
     1741 tgcctcttca ttgtggaaga aaaacattgg tgtaaacgtc aaactggtta accaagagtg
     1801 gaaaacgttc ctcgacaccc gtcaccaggg tacttttgat gtggcccgtg caggctggtg
     1861 tgctgactac aacgaaccaa cttccttcct gaacaccatg ctttcgaaca gctcgatgaa
     1921 taccgcgcat tataagagcc cggcctttga cagcattatg gcggaaacgc tgaaagtgac
     1981 tgacgaggcg cagcgcacag ctctgtacac taaagcagaa caacagctgg ataaggattc
     2041 ggccattgtt cctgtttatt actacgtgaa tgcgcgtctg gtgaaaccgt gggttggtgg
     2101 ctataccggc aaagatccgc tggataatac ctatacccgg aatatgtaca ttgtgaagca
     2161 ctaatggcaa tacgtggggc aggagtgtcc tgctccacgg tgtctgattt ttatcgcatt
     2221 acagaaggca caggccagaa ggtagggcaa tgttaaaatt tattctacgt cgctgtctgg
     2281 aagcgattcc gacgctattt attcttatta ctatttcgtt ctttatgatg cgcctcgcgc
     2341 cgggaagccc ttttaccggc gaacgtactt taccgcctga agtgatggcc aatatcgaag
     2401 cgaaatatca tcttaatgat ccgatcatga cacagtattt cagctacctg aaacaactgg
     2461 cgcacggtga tttcggtcca tcgtttaaat ataaagatta ttcggtcaat gacctggtgg
     2521 catccagttt tcccgtttct gccaaactgg gagccgcagc atttttcctt gcggtaatac
     2581 tgggtgttag tgctggcgtt attgccgcat taaaacaaaa caccaaatgg gactataccg
     2641 tgatggggct ggcaatgacc ggggttgtta tccccagttt tgtggttgcg ccattattag
     2701 tcatgatatt tgcgatcatt ttgcattggc tgccgggcgg tggctggaat ggtggggcgc
     2761 ttaaattcat gatattgccg atggtggcgt tgtcactcgc ctatatcgcc agtattgcgc
     2821 gtattacccg tggctctatg attgaagtat tacactccaa ttttattcgt actgcccggg
     2881 cgaaagggtt acctatgcgg cggatcattt tacgccacgc attaaaacct gctctgttac
     2941 ccgtgctctc ctatatgggc cccgcatttg tcggcattat taccggttct atggttatcg
     3001 aaaccattta tggtttgccg gggattgggc aactgttcgt taatggcgca ttgaaccgtg
     3061 actattcctt agtgttaagc ctgaccatcc tggttggtgc tttaaccatt ttgtttaatg
     3121 ccattgtcga tgtgctatat gcggttatcg acccgaaaat ccgttactga tactggagct
     3181 cgcgatgatg ttaagtaaga aaaacagcga gacgctggaa aatttcagtg aaaagctgga
     3241 ggtcgaaggg cgcagcttgt ggcaggacgc acgtcgacgt tttatgcata accgtgcggc
     3301 ggttgccagt ctgatagtgc tggtgctgat cgcgttattt gtaatcctgg caccgatgct
     3361 ttcgcagttt gcctatgacg atactgactg ggcgatgatg tccagcgccc cggatatgga
     3421 gtccggtcac tactttggta ctgactcatc cggtcgcgac ctgcttgtgc gcgttgcgat
     3481 tggcgggcgt atctcactca tggtcggtgt tgctgcggca ctggtggcag tggtcgtcgg
     3541 gacactttat ggttcgcttt ccggttatct gggcggtaaa gtggattcgg taatgatgcg
     3601 tctgctggaa atcctcaact ccttcccatt catgttcttc gtcattttgc tggtgacctt
     3661 tttcggtcaa aacatcctgc tgattttcgt ggcgataggc atggtttcct ggctggatat
     3721 ggctcgtatt gtgcgtgggc aaaccctgag tctgaagcgc aaagagttta ttgaggcggc
     3781 acaagttggc ggtgtatcga catcgggcat tgttattcgc cacattgtgc cgaatgtact
     3841 cggtgtggtg gtggtctacg catcacttct ggtgcccagc atgatcctct ttgaatcttt
     3901 ccttagcttc ctggggttgg gtacgcaaga gccgttaagc agctggggtg cattgctgag
     3961 tgatggcgcg aactcgatgg aagtctctcc atggttattg ttgttcccag cgggattcct
     4021 cgtggtgacg ctgttttgtt tcaactttat cggcgatggc ttgcgtgatg ccctcgaccc
     4081 gaaagatcgt taaggagtgc agccatgagc gtaattgaaa ctacaactgt gccgctcgca
     4141 caacaacagg ctgacgcact gctgaacgtg aaagatttgc gtgtcacctt tagtaccccg
     4201 gacggcgacg tcacggcggt caatgatttg aatttttccc tacgtgccgg agaaacgctg
     4261 ggtattgtag gtgagtctgg ttcgggtaaa tcgcaaactg catttgcgtt gatgggcctg
     4321 ttggctgcca acggacgtat tggcggatcg gcaaccttca atgggcgtga aatcctcaat
     4381 ttgccagagc atgaactcaa taaactgcgc gctgaacaaa tctcaatgat ttttcaggac
     4441 ccaatgactt cgttgaatcc ctatatgcgc gtcggtgagc agttaatgga agtgctgatg
     4501 ctgcataaga acatgagcaa agctgaggcg tttgaagagt cggtgcggat gctcgatgcg
     4561 gtaaaaatgc cggaagcgcg taaacgcatg aaaatgtacc cgcacgaatt ttctggcggc
     4621 atgcgtcagc gagtcatgat tgcgatggca ttgctatgtc gacctaagct actgattgcg
     4681 gatgaaccca ctactgcgct ggacgtcacc gtacaggcgc agatcatgac gctattaaat
     4741 gaactgaagc gggaatttaa taccgccatc attatgatca cccacgatct tggcgtggtg
     4801 gcggggatct gtgacaaagt gctggtaatg tacgccgggc gcacgatgga atatggcaat
     4861 gcgcgcgatg tcttttatca acccgttcat ccttattcta tcggtttgct caacgcggtg
     4921 ccgcgtcttg atgcggaagg tgaaacaatg ttgaccatcc cgggtaatcc gccaaacttg
     4981 ctgcgattac cgaaaggttg cccgttccag ccacgttgtc cacatgcgat ggaaatttgt
     5041 agtagcgcac cgccgctgga agagtttacg cctggccgtc tgcgtgcttg ctttaaaccg
     5101 gtggaggaac tgttatgaat gctgtaactg aaggaagaaa agtcctcctt gaaatcgccg
     5161 atcttaaagt gcactttgaa atcaaagatg gcaaacagtg gttctggcaa ccgccgaaaa
     5221 cgctcaaagc cgtcgatggt gtcactcttc gcctgtatga aggggaaaca ttaggtgtgg
     5281 taggggaatc gggatgcggt aagtccacct ttgctcgcgc catcattggc ctggttaaag
     5341 cgaccgacgg tcatgttgcc tggttaggta aagagttgct gggcatgaag cccgatgaat
     5401 ggcgtgccgt tcgcagtgat attcagatga ttttccagga tccgttggca tcgctaaacc
     5461 cgcgtatgac catcggcgag atcatcgctg aaccactgcg tacttatcat ccgaaaatgt
     5521 cacgccagga agttcgcgag cgcgtgaagg cgatgatgct gaaagtcggg ttattgccta
     5581 acctgattaa ccgctatccg catgagttct ccggtgggca gtgccagcgt atcgggattg
     5641 ctcgtgctct tattcttgaa ccgaagctga ttatctgtga tgagccggtg tcggcgctgg
     5701 acgtgtcaat tcaggcgcag gtggtcaacc tgctccagca attgcaacgg gagatgggat
     5761 tgtcattaat ttttatcgct cacgacctgg ccgtggtaaa acacatttcc gatcgtgtgt
     5821 tggttatgta tctcggccat gcggtagaac tggggaccta tgatgaggtc taccacaatc
     5881 cactacatcc ttacaccagg gcattgatgt cggcagtccc catacctgat ccggatctgg
     5941 agaagaacaa aaccatccag ttactggaag gggaattacc gtcgccgatc aacccgcctt
     6001 ccggttgtgt tttccgtacc cgttgcccga ttgccggtcc ggagtgcgcc aaaacacgtc
     6061 ctgtgctgga agggagtttc agacacgccg tttcttgcct gaaagtcgat ccgctttaaa
     6121 cacaataagg gctgacagtt gtcagccctt tttcacgcca aaagcgatta tttattcccg
     6181 ccagatgata tggcaaagtt tgtgatcttt ttcgcggcat aacagaatgc gggcgaaaac
     6241 atcgttgatt tcaccatcct cactgtccgc cagaccaatc accacttcgg caaaaaagtc
     6301 tgggttcaaa tcgaaatcaa catgttcctg ccagtcttcc gccggatcga ataactccgc
     6361 gccgccgcgc tcttcaaact gaagattgaa cagcagaaca tcagctggat cgagattgtc
     6421 ggcagccagt tcgagaaaaa tatcgtaggc ctgctcaagc gtttcatctt cagtcaggcg
     6481 attgtttaga tccatatcca tagtcactac ctgtttaacc tctgttggcg acgttttaca
     6541 gcaacggact gaagaagtaa aacagtcgct cggcgacacg ttgccataat ggacgtttta
     6601 gccataaacg ggcatcgagc agacgtgaac gcgaaatata atcgtcctga acggcggcaa
     6661 ggtctgcacc aaaaccttta tcgtcgattg ccagggtaat ctcgaaattt agccacagac
     6721 tccgcatatc aaggttaacg gtaccaacca gacttagttc gccatcgacc agcacgctct
     6781 tggtatgcag taacccgcct tcaaactgat aaattttaac cccagcagca agaagttccg
     6841 taaagaatgc gcgactggcc cagccgacca gcatcgagtc attttttcgc ggaaggataa
     6901 tactgacatc caccccgcgc tgcgccgctg tgcaaatcgc atgaagtaaa tcatcgcttg
     6961 gcacaaagta gggcgtggtc atgatcaaat attcacgcgc cgaataagcc gcagtcaata
     7021 atgcctggtg aatgagatct tccggaaagc cggggccaga agcaattgtg tgaatggtat
     7081 gaccgctggc ctgctcaaac ggcataatat tgacatcagg tggtggcggt agaatacgtt
     7141 ttccggtttc aatctcccag tcgcaggaat aaataatccc catcgcggtg gcgatggggc
     7201 cttccatacg cgccatcaga tcaatccatt gccctacgcc cgcatcttgt ttgaagtagc
     7261 gaggatcgac catattcatg ctgccggtgt acgcgatgta attatcgatc atgatcatct
     7321 tgcgatgttg gcgcaggtcc atacggcgta aaaacacacg cattagattg acctttaagg
     7381 cttcgaccac ttcaataccg gcattacgca ttagctcggg ccacgggctg cggaaaaaag
     7441 ccacactccc ggcggagtcg agcatcaatc ggcaatgaat gccgcgtcgc gcagccgcca
     7501 ttaatgattc agccacctgg tccgccatgc cgccgggctg ccagatataa aacaccattt
     7561 caatattatg gcgcgcgagc tggatgtcgc ggattaacgc ctgcatcaca tcatctgact
     7621 cggtcatcag ttgtagctga ttccctttga ccccagcgat cccctgacga cgctcgcaaa
     7681 gcttgaataa tggcgcagcg acactgctat tttcttcggc gaagatatgc ttacaggctt
     7741 taaggtcgtt aagccatttt gcggtggaag gccacatcgc tctggcgcgc tcagcgcggc
     7801 gtttgcctaa atggagctcg ccaacggcaa gataggcaat aattccgact aacggcagaa
     7861 tgtaaataat caacagccag gccatcgcgg agggaactgc gcgtcgtttc attagaatgc
     7921 gtaaagttac gcctgcaatg agcaaccagt atcccagaat ggccaaccaa ctcaccaacg
     7981 tataaacggt tgtcatagat tagaaatcct tttgaaagcg cattgttatg agtttacgca
     8041 tatggattca tctggcaaat aaaaacgcgg gaaaagcact ggtcagcgtc gggggcgggg
     8101 gtataatgac cattctgtta ttgcatagag tagttaacat gaagcggagt agaacggaag
     8161 tggggcgctg gcgcatgcag cgtcaggcta gccgacgtaa atcgcgttgg cttgaggggc
     8221 aatcgcgccg aaatatgcgt atccacagca tcaggaagtg cattctaaac aaacagcgta
     8281 actcgttatt gtttgcgatc tacaatatct aaatgtactg ggcaccattg cggtgcccaa
     8341 taagtttact ctttcgtctt taaactctat ttttgcaccg attctttact gtcagctttc
     8401 gtttcttgtt catcgttatc gctgaaaata ccatgacctg agttcaacaa cattgaaacg
     8461 agcatatcat tattaatctc ttcaccgttt aaaactcgcg ccagaatttc gctgccaaac
     8521 agttgcggtg agagaatgat atccggatgt accatcttaa tcttattcag gtttttgcta
     8581 tcactgacgg cgagaactgt tttgacatca ctgctcatat cttttgccga gagtacaaca
     8641 aacgcgttat ctgcatcgtt atcactcagc gccagaatgg cccggcatcg atcgattccc
     8701 gctttcttta atactgaact gtcattactg tcaccgggga taacatcagc gttatcgcct
     8761 aagcgttgct caagttgctt gatatcatct tcaggcaagt tgctgataac cgttacgttt
     8821 tgtccgcgtt gattcagttg caggatcgta ttgatggcga gaatcgaatg tccgcaaaca
     8881 ataaaatgat ctttacgatg cattgtatga ttgtttcctt ttacaagttt gttgaatccc
     8941 ccgcggataa gcggaccaaa aattgaggtc atagatgtgg caaaaacggt aatgccggaa
     9001 ataatgaccg aaatagtgaa caatcgtgct gattcagaaa cagggacaat atctccatag
     9061 ccgacggttg acatggtttc tatcgaaaaa tagaacgcgg tcatcaaact ttctattcgc
     9121 ggattaaaac cttcgcttaa ataaagcgca ccgtaggttg agtaaaacag taatgtcgtg
     9181 aaactaataa atgcaaaaat tgtcccggct gcggcgctac tgtgggagaa gtctttgcgc
     9241 agtatcagca aaaacaccag cgtaaaaatg caaaatccaa tactaaattt cagccaggga
     9301 taaaaatgca gggtgtaaat tagcgctatc aacaacaaaa tgatactgat tgcccatgcg
     9361 agctttgccc ggaacagtaa gccaatggag ttcaggacaa gaaagacgcc gagcataaat
     9421 agtggggcgt ttgccagcaa ggagagatcc aactctgaaa atgctttgat atggaaaata
     9481 tcaagcaaat tgaccgacat accatagatt gttttaaaaa taagcaatcc atttaaaaag
     9541 acggccagcg cgagaatgtc gtgccgtagg gtcacccata aatttgttgc tgtttgtttg
     9601 aatgtagccc agtgactcac tgatacctct gtaaccacaa ttttgtttaa ttatcttggc
     9661 gtgcacattt tctgaacata catgcagcgc gtgaatgtgt taaacaatag tagatgactt
     9721 tatccgcagt aatcaaaggt tttgagcgag caactgtacc tcaggaaagg tcatttttcc
     9781 tgaatatgct cacatcatat aaagaaatac agataaagtt attatctgct tgtggtggtg
     9841 aatgcactga ccggctataa ggaaaggcca aacaagaaca cggttgcaaa aaccgtgccc
     9901 ttaaatattg aatctctatt cagaacactt tcttaaatgg tttcactgaa acgtgttcat
     9961 agacacctgc cgctacgtac gggtcagcat cggcccaggc ctgagctgct tccagcgatt
    10021 caaattcagc aataacggtt gagccagtaa atcccgcagc ccctggatcg ttactgtcta
    10081 ccgctggcat tggaccagct gtcaacaaac gaccttcatc atgcagtaac tgtaaacgtg
    10141 ctaaatgtgc cggacgaacg gaaaggcgtt tttcgaggct atcagctttg tcttgagcgt
    10201 aaataacata caacacgggc acaactcctt gttcgggaaa gttgtaaagt acgttatttg
    10261 aaagggcgaa gatctgcaac ggaaagatga tgtctttgtt aagaccatgc ataaagtaag
    10321 gtcaattacg ccaaaaatga cattttcact gatcctgatc gccttgcctt attgaatatg
    10381 attgctattt gcatttaaaa tcgaggcctg gtttttctac tgaaatgatt atgacttcaa
    10441 tgacccttga tttacctcgc cgcttcccct ggccgacgtt actttcggtc tgcattcatg
    10501 gtgctgttgt ggcgggtctg ctctatacct cggtacatca ggttattgaa ctacctgcgc
    10561 ctgcgcagcc gatttctgtc acgatggttg cgcctgctga tctcgaaccg ccacaagccg
    10621 ttcagccgcc accggagcca gtggtagagc cagaaccgga acctgagccg atccccgaac
    10681 cgccaaaaga agcaccggtg gtcattgaaa agccgaagcc gaaacctaag ccaaaaccga
    10741 agccggtgaa aaaggtacag gagcagccaa aacgcgatgt caaacccgta gagtcgcgtc
    10801 cggcatcacc gtttgaaaat actgcacccg cgcgcccgac atcaagtacg gcaacggctg
    10861 caaccagcaa gccggttacc agtgtggctt caggaccacg cgcattaagc cgtaatcagc
    10921 cgcagtatcc ggcacgagca caggcattgc gcattgaagg gcaggttaaa gttaaatttg
    10981 atgtcacgcc ggatggtcgc gtggataacg tacaaatcct ctcagccaag cctgcgaaca
    11041 tgtttgagcg tgaggtgaaa aatgcgatgc gcagatggcg ttatgagccg ggtaagccag
    11101 gcagtgggat tgtggtgaat atcctgttta aaattaacgg caccaccgaa attcagtaag
    11161 cagaaagtca aaagcctccg accggaggct tttgactatt actcaacagg taaggcgcga
    11221 ggttttcctt caggatcaac cgcgacatac ttaaataatg cttctgtcgc tttatagcgt
    11281 tgcccgattg gttcagacgc tacttttttc acccacactt caatattaat gctgaccgat
    11341 gtcgtccctt tctggacaca gcgtgcatag cagcacacca catcgccgac cgcaaccggc
    11401 cgtaagaaag tcattccttc aacccgcaca gtcactacgc gaccgtgggc aatttctttc
    11461 gccagaatag cgccgccaat atccatttgt gacattaacc aaccaccaaa gatgtcacca
    11521 ttggcattgg tatcggcggg catggctaaa gtacgtaaaa caagatcgcc ctgagggacg
    11581 ttatgtgttg tagacatggt aaaaccgact taaaaggaaa atcacaggcg cgatgctact
    11641 atgattttcc tgaggagaac agaggagata cagcgccagc cccgaaggac tggcagtctg
    11701 gttaggattt atcttcctgc ggcatgtggc ggtagatata gataccgctt aacaatgtga
    11761 agattaaggt aagggcggtc aggccaaaga ctttaaagtt gacccaaata ttttgcggca
    11821 gccagaatgc gatgtagatg tttgccagac cgcaaaggat aaagaaaaca gcccaagcca
    11881 gatttagctt cgaccatacc ggttgcggca gcgtgagttc tttacccagc atccgctgaa
    11941 ttagcggctt tttcatcacc cattggctga ctaacagggc tcccgcaaac agagcataaa
    12001 tgactgtaac cttccattta ataaactcat cattgtggaa gaacagcgtc aagccaccga
    12061 agacgaccac cagaacaaaa gtgatcaggg ccatcttctc aaccttacga aagcgaaccc
    12121 agctatagat aagcacaatc gccgtggcga cgatcagcgc cgcagtagcc gcatagatgt
    12181 cataaatctt gtaaaacgcg aaaaagacaa ccagcggtaa aaaatcaaga aactgcttca
    12241 ttttacgatt ccgtaatcaa atgcttaagg ttattggcga atcaacatat acaggcggaa
    12301 cagatagatg agcaatatgg cagaaatcag gttgctcaag gtgttcgcca gtacggcacc
    12361 aatttccggg gttaatgcgg caaaagaaga ggcaaaaagc agcaacagtg tttttgccag
    12421 caaccagctc agtactgcgg gtgccaccag acgcatattc gcccaagtca gccgcatact
    12481 gctacgcatc gaggcaaaaa tgcccatttt gtcctgtacc agcatcaccg gtgccagggc
    12541 cagtaaaatg gccatgataa ttcccggaac gaccaccagc atgatgccaa tctgtactaa
    12601 aagggtagtc agaaaaatca gaataaataa cttgggcaat atcggcgcac tggcaccaat
    12661 agctcgcagc gcactgactc tctgacccgc agacaccagc tggataatta atattacgcc
    12721 tccggcgaga atggcgttac cgattaatcc tgaaaaagtg gacgccgctg aagcctgcag
    12781 caaaatttgt tgctgttccg gtgacatatt ctgaaccagg tcgaacaacc cactactgcc
    12841 gctaacgggc acgccgtcat tgagctgcgc aagctgtgca tcactgggtg agaaaacatg
    12901 ccctaacacc actgtgataa acgcacatag caacgatacc aacagaatgg tcataaattg
    12961 attacggaag aaatttccgg tgtcacggta tacggactgc gccgtgatag acatgcactc
    13021 tccttgagtt ttatgcaggt gttaattagc gggcaattgt accctggtta agcctcgggt
    13081 ggcagcatca ggtcttgtat ggaaaagcat atctttgtaa agcggaagta attgctggcc
    13141 ttcaggcgtg ggcaaaccgc ggcaagtggc gatcgagtta atatttgcgt agagaaaata
    13201 tttaaaaatt gatttaaatc acattaacca ggattctcaa tgcaacttct aaattaatcc
    13261 agatcaataa atggtgaatt atcatatgta atgtgatcta tgtaggatca tttgttactc
    13321 caatgtaggt atattcgtca cgtttttata accataacga cggagcggat atgaaaaagt
    13381 taacagtggc ggctttggca gtaacaactc ttctttctgg cagtgccttt gcgcatgaag
    13441 caggcgaatt ttttatgcgt gcaggttctg caaccgtacg tccaacagaa ggtgctggtg
    13501 gtacgttagg aagtctgggt ggattcagcg tgaccaataa cactcaactg ggcttgacgt
    13561 ttacttatat ggcgaccgac aacattggtg tggaattact ggcagcgacg ccgttccgcc
    13621 ataaaatcgg cacccgggcg accggcgata ttgcaaccgt tcaccatctg ccgccaacac
    13681 tgatggcgca gtggtatttt ggtgatgcca gcagcaaatt ccgtccttac gttggggccg
    13741 gtattaacta caccaccttc tttgataatg gatttaacga tcatggcaaa gaggcagggc
    13801 tttccgatct cagtctgaaa gattcctggg gagctgccgg gcaggtgggg gttgattatc
    13861 tgattaaccg tgactggttg gttaacatgt cagtgtggta catggatatc gataccaccg
    13921 ccaattataa gctgggcggt gcacagcaac acgatagcgt acgcctcgat ccgtgggtgt
    13981 ttatgttctc agcaggatat cgtttttaat tccgcacaaa aacgaccccg taatatacgg
    14041 ggtcaataag gacatggtat aaagggtatt atttcttcgc ttctacgcca tcagtttcag
    14101 agcgaattaa aaatttctca gttgtttgcg gaatattctg aatcagccag tcggccattt
    14161 gcttttcctc atttaaaatc gcttcgatgg ttggaattga agctgtatca ccggcatttt
    14221 ttgctgctgc taatagtgag gtgtaacagg cgatttcaaa ttgctcgaag acatatccgc
    14281 taatagagcc tttgactatt tcatcagaag ggaatatacc accgattgac tgcccaagcg
    14341 cagccatttt actcatggaa tctttaatga ctgaacgtga aatgtcatta cgatcaagaa
    14401 tagtttccag ttgaacaatc tggtttttgg tttcactaag atgttgttca atacgagcgc
    14461 gtagttcagg ataattatct atacggctgg ccatggattc aagcatagat tcggcttgct
    14521 tttccattgc gtgggcgtca cgtaaccagt catgataatg ttcaatacga ttcatgaaaa
    14581 tgtcctcttt ataaaatgac taaaagttaa aattcatatt tcaggcttta ttttcggctt
    14641 tcttatttac gttattaatg gccagatcag tcagtttgat gtcggtggcc ttttcttctt
    14701 ccagggtttc tttcagaagt ttcgctgctt tacggtaacc taattgttca gccagcgtcg
    14761 ctaatgtccc gtaactggca atctcataat gctcgacttt ctgtgctgcg gcaatcagtg
    14821 cggcatcacg cacttcgttt ttctcggtac tttcgatgac ctcattagct tcttcaataa
    14881 gaccttccat tgccacacat ttcatgcgct taattttcag gttcgattcg gactccacaa
    14941 cttgatcaat acgttcaatc tgtccatgag tttcctcgag gtgcgcatga aaagcctgac
    15001 ttaatttttc atttgatgtt gctcttgcga gttttgccag tgcccgggtt aattgttttt
    15061 ctgcgctgta ggtatctgaa agcaggtgaa taaatacatc ttcaatggtc ttcatattca
    15121 tatttttctc cagtgaaatc actgcgagcc atacggcccg cagatgcaat tatctttatc
    15181 agctgatatt aataattaac ggtgaatcag gatttgcctg atttattacc accgctttgt
    15241 tgaccgcctt ttttacccgc ttcagatgcg cgttgcggat catttttaaa attaccgccg
    15301 ctatgctgac cgcctttacg gcctgcgtcg gatgccttct cacggtcttc ggcgaaattt
    15361 cctgaaccac cacgatgttc ggccatgtta tttctcccgt tgcgttgcat tgtttcatta
    15421 atatgagtgt tgtgtgtcga cactcattaa aattagtcgc taatgagaat tagtcaaatt
    15481 aagcgcaacg agaagataga gggaaaatat attttgagga acattctgga tatattaaca
    15541 attacctgag gaa
//
LOCUS       DAPGWB010000104        15394 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.105, whole genome shotgun sequence.
ACCESSION   DAPGWB010000104 DAPGWB010000000
VERSION     DAPGWB010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15394
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.105"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(132..938)
                     /gene="trpA"
                     /locus_tag="RHX79_003141"
     CDS             complement(132..938)
                     /gene="trpA"
                     /locus_tag="RHX79_003141"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDV2198285.1"
                     /translation="MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAG
                     ADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMY
                     ANLVFNKGIDEFYAQCEKVGVDSVLVADVPIEESAPFRQAALRHNVAPIFICPPNADD
                     DLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPD
                     QVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATRS"
     gene            complement(938..2131)
                     /gene="trpB"
                     /locus_tag="RHX79_003142"
     CDS             complement(938..2131)
                     /gene="trpB"
                     /locus_tag="RHX79_003142"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDV2198286.1"
                     /translation="MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQ
                     FNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
                     KTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVH
                     SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILE
                     REGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRV
                     GIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALE
                     AFKTLCLHEGIIPALESSHALAHALKMMRENPDKEQLLVVNLSGRGDKDIFTVHDILK
                     ARGEI"
     gene            complement(2143..3504)
                     /gene="trpCF"
                     /locus_tag="RHX79_003143"
     CDS             complement(2143..3504)
                     /gene="trpCF"
                     /locus_tag="RHX79_003143"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HDV2198287.1"
                     /translation="MMQTVLAKIVADKAIWVETRKQQQPLASFQNEVQPSTRHFYDAL
                     QGARTAFILECKKASPSKGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFDFLP
                     IVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDEQYRQLAAVAHSLEMG
                     VLTEVSNEEELERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGI
                     NTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAG
                     AIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQL
                     HGNEDQLYIDTLREALPAHVAIWKALSVGETLPARELQHVDKYVLDNGQGGSGQRFDW
                     SLLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTL
                     RAY"
     gene            complement(3505..5100)
                     /gene="trpD"
                     /locus_tag="RHX79_003144"
     CDS             complement(3505..5100)
                     /gene="trpD"
                     /locus_tag="RHX79_003144"
                     /EC_number="2.4.2.18"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase glutamate
                     amidotransferase component TrpG/anthranilate
                     phosphoribosyltransferase TrpD"
                     /protein_id="HDV2198288.1"
                     /translation="MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERL
                     ATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG
                     EILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHD
                     ADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPANTLQPILEKLYQAQTLSQQES
                     HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI
                     VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAD
                     KSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV
                     YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDF
                     GLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANA
                     QTVLEVLRSGSAYDRVTALAARG"
     gene            complement(5100..6662)
                     /gene="trpE"
                     /locus_tag="RHX79_003145"
     CDS             complement(5100..6662)
                     /gene="trpE"
                     /locus_tag="RHX79_003145"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HDV2198289.1"
                     /translation="MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADID
                     SKDDLKSLLLVDSALRITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQLPNCRV
                     LRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED
                     LPQLSAENNCPDFCFYLAETLMVIDHQKKSTRIQASLFAPNEEEKQRLTARLNELRQQ
                     LTEAAPPLPVVSVPHMRCECNQSDEEFGGVVRLLQKAIRAGEIFQVVPSRRFSLPCPS
                     PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGR
                     RADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDR
                     YSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYG
                     GAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGVVLDSIPQSEADETRNKARAVLR
                     AIATAHHAQETF"
     misc_feature    complement(6684..6777)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00513"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Trp leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00513"
     gene            complement(6754..6798)
                     /gene="trpL"
                     /locus_tag="RHX79_003146"
     CDS             complement(6754..6798)
                     /gene="trpL"
                     /locus_tag="RHX79_003146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon leader peptide"
                     /protein_id="HDV2198290.1"
                     /translation="MKAIFVLKGWWRTS"
     gene            6936..7817
                     /gene="yciV"
                     /locus_tag="RHX79_003147"
     CDS             6936..7817
                     /gene="yciV"
                     /locus_tag="RHX79_003147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exoribonuclease"
                     /protein_id="HDV2198291.1"
                     /translation="MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITD
                     HDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQ
                     QTERRNQRAQLIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADV
                     FKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAE
                     HHGDAMEVAQCQQSPNERTQLAALARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVE
                     GVWQLWEQPQNTTEREL"
     gene            7814..8434
                     /locus_tag="RHX79_003148"
     CDS             7814..8434
                     /locus_tag="RHX79_003148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HDV2198292.1"
                     /translation="MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKI
                     EDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILK
                     GTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEI
                     KDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL"
     gene            8535..9407
                     /gene="rluB"
                     /locus_tag="RHX79_003149"
     CDS             8535..9407
                     /gene="rluB"
                     /locus_tag="RHX79_003149"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HDV2198293.1"
                     /translation="MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEV
                     TPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGAR
                     WIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGV
                     QLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDI
                     PLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHS
                     QVSGGRRSGGRNNG"
     gene            complement(9447..10037)
                     /gene="cobO"
                     /locus_tag="RHX79_003150"
     CDS             complement(9447..10037)
                     /gene="cobO"
                     /locus_tag="RHX79_003150"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HDV2198294.1"
                     /translation="MSDERYQQRQQRVKEKVDARVAQAQDERGIIIVFTGNGKGKTTA
                     AFGTATRAVGHGKKVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWDTQNRESDT
                     AACREVWQHAKRMLADSSLDMVLLDELTYMVAYDYLPLEEVVQALNERPHQQTVIITG
                     RGCHRDILELADTVSELRPVKHAFDAGVKAQIGIDY"
     gene            complement(10034..10792)
                     /locus_tag="RHX79_003151"
     CDS             complement(10034..10792)
                     /locus_tag="RHX79_003151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciK family oxidoreductase"
                     /protein_id="HDV2198295.1"
                     /translation="MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGR
                     NEEKLRQVASHINEETGRQPQWFILDLLTCTSEDCQQLAQRITVNYPRLDGVLHNAGL
                     LGDVCPISEQNPQVWQDVMQVNVNATFLLTQALLPLLLKSDAGSLVFTSSSVGRQGRA
                     NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA
                     DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ"
     gene            11012..12061
                     /gene="sohB"
                     /locus_tag="RHX79_003152"
     CDS             11012..12061
                     /gene="sohB"
                     /locus_tag="RHX79_003152"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HDV2198296.1"
                     /translation="MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRV
                     NNLSEQYKEMKEELAAALMDSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPR
                     VWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQR
                     LRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKD
                     IDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVAT
                     GEHWYGQQAVEKGLVDEINTSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESAD
                     RLLLRWWQRGQKPLM"
     gene            complement(12097..12348)
                     /locus_tag="RHX79_003153"
     CDS             complement(12097..12348)
                     /locus_tag="RHX79_003153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciN family protein"
                     /protein_id="HDV2198297.1"
                     /translation="MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLV
                     FTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD"
     gene            12728..15325
                     /gene="topA"
                     /locus_tag="RHX79_003154"
     CDS             12728..15325
                     /gene="topA"
                     /locus_tag="RHX79_003154"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDV2198298.1"
                     /translation="MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAA
                     KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEK
                     ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNID
                     RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE
                     FWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPT
                     TSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM
                     VRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQ
                     LIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRIL
                     PAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG
                     YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDH
                     FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL
                     PPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHV
                     CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTR
                     KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVE
                     ELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYV
                     DGKWVEGKK"
BASE COUNT         3742 a         3916 c         4132 g         3604 t
ORIGIN      
        1 aaaatgacgt aagttgacgt tcgaccgggg taagcgaaac ggtaaaaaga taaatattaa
       61 atgaatttag gatttttccg gcttcattaa agaaagttaa aatgccgcca gcggaactgg
      121 cggctgtggg attaactgcg cgtcgccgct ttcatcggtt gtacaaaaac tttcagtgcc
      181 gccagcattt tctctggctc attaatatgt tgctcgatga ttttaacaat ggccgaacca
      241 gaaatcgcgc ccgcagctcc tgcatcaatc gctgctttta cctgatccgg ggcggaaata
      301 ccaaacccct gcaatggagg tgcagcgttg tactctttca gcttcgcaac cagatgattg
      361 aggggtaacg cggcgcggtt ttctgcgccg gtcacgcccg ctcgtgacag caaataggtg
      421 taaccacgac cgtaagaggc tatctggcgc agcaggtcgt catcggcatt tggcgggcag
      481 atgaagatag gtgcgacatt atggcgcaac gcggcctggc ggaagggcgc ggactcttca
      541 attggcacat cggcaaccag caccgaatcg acgccgactt tctcgcactg ggcataaaac
      601 tcatcaatgc ctttgttaaa caccagattg gcatacatca acaggccaat gggaatggtc
      661 gggtgtttct ggcgaatcag tgccagcatt tcaaaacatt gtgccggagt cacacctgcc
      721 gcaaaggcgc gcagagtggc gttttgaatg gtcgggccat ccgctagtgg gtcggagaag
      781 gggataccta actccagcgc gtcagcaccg gcttcaatta gcgtatcgat aattttcaat
      841 gactgctcaa tgcccggatc accgagcgtg acgaaaggaa cgaatgcgcc ttctttgcgc
      901 tccttcaact gggcaaacag agattcgtag cgttccatca gatttcccct cgtgctttca
      961 aaatatcgtg aacggtgaag atgtctttat cgccgcgacc ggaaaggtta accaccagta
     1021 gctgctcttt atccgggttt tcgcgcatca ttttcaacgc atgggccagg gcgtgggagg
     1081 attccagcgc cgggatgatc ccttcgtgca ggcacagcgt tttgaaggct tcaagggctt
     1141 catcatcggt aatagacacg taatcagcgc gtccagtgct gttaagatac gcgtgttgtg
     1201 ggccgacaga cgggaaatcc agtccggcgg agatggagta agattcttca atctgcccgt
     1261 cttcggtttg catcatcggc gctttcatac cgaaatagat gcccacgcga ccatgtttta
     1321 acggtgcgcc gtgctcgcca gtttcgatac cgtgaccacc tggctccaca ccaatcaggc
     1381 cgacgttggt ttcattgatg aaatcagcaa acatgccgat ggcattcgaa ccgccgccaa
     1441 cacaggcgat aacggcatcc ggcaggcgac cttctctttc cagaatctgc gctttggttt
     1501 cttcgccaat catccgctga aactcacgca caatggtcgg ataaggatgc gggccagctg
     1561 cggtgcccag catatagtgc gcggtttcgt aactaccgga ccagtcgcgc agcgcctcgt
     1621 tacaggcatc tttcagcgtc gcggaaccgc tatgcaccgg gatcacttcc gcacccatta
     1681 agcgcatacg aaaaacgtta ggcgactggc gttctacgtc tttggcaccc atataaatac
     1741 ggcatttcag gccgagcagg gcgctggcaa gggccgacgc cacgccatgc tgaccggcac
     1801 cggtttcggc gatgatttcg gttttaccca tccgcttcgc cagtaaagcc tgaccgagca
     1861 cctggttagt tttatgcgcg ccgccgtgca gcaaatcttc acgcttgaga tacagagtgg
     1921 tgttcgtccc ggctgtaatg ttctggcatt tggtcagcgc ggttggacgc ccggcatagt
     1981 ttttcagcag gtcgttgaac tgagcctgaa attcaggatc tttttgcgca ctgacaaaag
     2041 cttcttccag ctggcgcaga gcaggcatca ggatttgtgg cacgtacatg ccgccaaact
     2101 caccaaaata ggggttaagt aatgttgtca ttgttccttt ccttaatatg cgcgcagcgt
     2161 ctggaaaacc gaggccaaaa gacgtgcgtc tttgatgccc ggttgcgact ctacagcaga
     2221 attaaaatca agtccggcgc agccggtttg tgccgcttcc acgcagttat ctgcgcctaa
     2281 gccccccgcc agcagaacgt tgccaagcga ttgaccattt aatagtgacc agtcgaaacg
     2341 ttgcccgctt ccaccctggc cgttgtctaa aacatattta tcaacgtgct gaagctcgcg
     2401 ggcgggcagg gtttcaccga cgcttaatgc tttccagatg gcaacgtgtg ctggcagagc
     2461 ttcacgcagc gtatcgatat acagctgatc ttcattacca tgcagttgca ctgccgccag
     2521 cgataacacc ttagctttgt ccaccacatc ggcaatatcg tgattgcgga acacgccaac
     2581 atactgcaac ggtgccgcag ccatcacttc ctgcgcctgt tcaacgttga cgcaacgcgg
     2641 tgatgtcgca acaaaaatca acccaccgta aatcgcgccc gcgtcataag ctgctttagc
     2701 atcttgccca cgcgtcaggc cacatacttt attctcaccc agcaacaccc ggcgcacggc
     2761 ggcgtgcaaa tcgtcatggg ccatcaacgc cgaaccaatc agaaaaccgt tagcgaagtg
     2821 gcttaactcg cgcacctgag cgtaagtatt gatgccggat tcgctgatta ccgttacgtt
     2881 gtgccccagt ttcggcgcaa gctcgcgggt acggttgaga tcaatcgaca aatcacgcag
     2941 atcgcggttg ttgatgccaa cgacctttgc ccccaatgca atggcacgct ccagttcctc
     3001 ttcattactg acttcggtca gcacacccat ctccagactg tgggcgacgg cggcaagctg
     3061 gcgatattgt tcgtcatcca gtactgaaag cattaataag caggcatcag cctggtaata
     3121 gcgcgccaga tagatctggt aaggatcgat aatgaagtct ttacataaaa tcggctgcgg
     3181 ggcgatttgg ctgacgatgg ggaggaaatc aaagctcccc tgaaaatatt tctcatcagt
     3241 cagcaccgaa attgccgaag cgtaatgttt ataaatggcg gcaatgcgtg ctggatcgaa
     3301 atcatcacgg atcacgcctt ttgacggcga cgctttcttg cactccagaa taaacgccgt
     3361 gcgcgcaccc tgtagcgcat cataaaaatg tcgcgtgctc ggctgaacct cattctgaaa
     3421 actggccagc ggttgctgct gtttgcgggt ttctacccaa atcgccttgt ctgcgacgat
     3481 tttcgctaaa acggtttgca tcatttaccc tcgtgccgcc agtgcggtaa ctctgtcgta
     3541 agcggaacca ctgcgcagta cctcaagaac ggtttgcgca ttggcttgca gatcttcatg
     3601 gccatgcagg cgcattaaca tggcgacgtt cgcagcgacg gctgcttcat gggcggcgtc
     3661 gcctttacct tgtaacaagc gtgttaaaat gtcacggttt tcttccggtg ttccgcctgc
     3721 cagttgctcc tggtggtagg gagtcaggcc aaaatcttca gcggtcaatt gatagctctt
     3781 aatttcgccg tcatgcagct cggcaacgat tgtcggcgcg tgtaatgaaa cttcatccat
     3841 cccgccgctg tgcaccaccg ccgcgcgttg ataccccagc acgcgcaagg tttcggcaat
     3901 cggcagcacc agttccggac tataaacacc aattaacgcc agcggcggat gcgccgggtt
     3961 aatcaatggc cccagcacat tgaacagggt gcgggttttc agttgctggc gaaccggcat
     4021 cgcgtggcgg aatccggtgt gatacttcgg cgcaaagagg aaacatacac ctaactcatc
     4081 cagcgcctgg cgcgatttat cggcgttcat atcaagatta ataccgaacg ccgccagcag
     4141 atcggacgaa ccagatttac tggagacgct acggttgccg tgtttcgcca ctttcagccc
     4201 acaggctgcg gcgacaaacg cactggcggt agaaatattg atactgttgc tgccgtcacc
     4261 gccagtaccg acgatatcag caaacagata atccgggcgc gggaacggcg cggcgttttc
     4321 cagtagcgcg gttgctgctc cggcgatctc gttcgggtgc tcaccgcgaa ttttcatgct
     4381 caccagcgcc gccgccagtt gttccggctt cagctcgcca cgcaccaccg ctgaaaacag
     4441 ctggtggctt tcttgttggc taagcgtctg cgcctgatac agtttttcca gaatcggttg
     4501 cagcgtgttg gctggctcta gtttctgctg cgcccaggcc agcgtttgtt ccagcaggcg
     4561 agcgccctgg gtggtgagaa tggattccgg atggaactgg aatccacaaa cgcgatccgc
     4621 atcgtgacgt actgccatca ccatgccatt aaaatgggcg ttgatggtta aaccggccgg
     4681 aatgttactg ccaaccagcg agtgataacg cgccaccggc agcgggtttg ttaatccggc
     4741 aaacatcgcc tgaccgtcat gttcaatgct cgacgcttta ccgtgaagaa tttcgcccgc
     4801 ctgaccgaca tagcccccgt aagcttcgac aattgcctga tgtccgaggc aaatgccaat
     4861 aatgggcagc ttgccacgca agcgggtgag gagttccggc atacaaccgg cttcgctcgg
     4921 cacaccgggg ccaggagaaa gcatcagtac cggattgctc atcgtcgcca ggcgttcaat
     4981 taaggtctgc gccggaatat ggttgcggta aatcaccaca ttatgcccat tgctgcgcaa
     5041 ctgatctgcc aggttgtacg taaaagagtc gatattatcg agcagcagaa tgtcagccat
     5101 cagaaagtct cctgtgcatg atgcgcggtg gcaatagcgc gcagtacagc gcgggcttta
     5161 ttacgggttt cgtcggcttc cgactgcgga atagaatcaa ggactacgcc agcaccggct
     5221 tgcacggtgg cgataccgtt ttccaccagc gccgagcgga tcacaatgca ggtgtcgaga
     5281 tcgccgtgcg cggtgaaata acctaccgcg ccgccgtagc tgccgcggcg acgaccttcc
     5341 gcctcggcaa ttaactgcat ggcgcgcact ttcggcgcac cgcttaacgt ccccatattc
     5401 atacaggcgc ggtaagcgtg tagggcgtcg agatcgtggc gcagctcacc gaccacgcgg
     5461 gagaccaggt gcatcacgta agagtaacgg tcaactttgg tgaggtcggc gacgtagcgg
     5521 ctgccggggg tgcaaatgcg tgccagatca ttacgggcaa gatccaccag catcagatgt
     5581 tcagaaagct ctttatgatc ggtacgcatt tccagttcga tgcggctgtc gaggtctctg
     5641 tccagcgagc catcggcacg acgaccgcgt ggacgtgttc cggcaatcgg gtagatctca
     5701 atctggcggc tggtggcgtc atacttgagc gaactttccg gcgacgcgcc aaacagggtg
     5761 aaatcattat cctgcataaa aaacatgtac gggctgggat tactcttttt cagcacgtaa
     5821 taggccgcca gcggtgacgg gcagggcaga gaaaaacggc gagatggcac cacctggaaa
     5881 atttctccag cgcgaatcgc tttttgcaac aaacgcacta cgccaccgaa ctcttcatcg
     5941 ctctgattac attcacaacg catatgcggc acggaaacca ccggcagcgg cggcgcggct
     6001 tcggtcagtt gctgacgtag ttcgttcagg cgagcagtga gacgttgttt ttcttcttca
     6061 ttcggagcaa acaggctggc ctgaatacgg gtgctttttt tctgatggtc aatcaccatc
     6121 agcgtttcag cgagataaaa acagaaatca gggcagttat tttccgctga cagttgcggt
     6181 aaatcttcaa atcccgccac aaggtcataa gagaacaggc cgccgaagaa cattgcttct
     6241 cgttcttcct tcggtacatt caacagattc tgcaataaac ggaaagcgtc aaaaaccgaa
     6301 agggagcata agcgagcgtc ttcatccagc agtggactga caggggggaa gcgcagcaca
     6361 cggcagtttg gtaattgttc attttccaca cccgcaggca gggcgttatc cagtagtgtc
     6421 agcagggctt cgccgttgcc ggaaagtgcc tggattgtga cagtgtcacc taaagctgta
     6481 atgcgcagcg cactgtctac cagcagcagg ctttttaaat catctttgct gtcgatatct
     6541 gcggattcca gcagcagcgt tgccggacga tccccacaca actggtgaaa aagcgcggtg
     6601 ggattgtcgc gataagcgcc ttcgcaggtt agcagttcga gagtcggttt ttgtgtttgc
     6661 attgttattc tctaattttg ttcaaaaaaa agcccgctca ttaggcgggc tgggtatctg
     6721 attgctttac gcatggtgaa tacactgccc gtttcaggaa gtgcgccacc aacctttcag
     6781 tacgaaaatt gctttcattg tcgataccct ttttacgtga acttgcgtac tagttaacta
     6841 gttcgatgat taattgtcaa cagctcattt cagaatattt gccagaaccg ttatgatgtc
     6901 ggcgcaaaaa acattatcca gaacgggagt gcgccttgag cgacacgaat tatgcagtga
     6961 tttacgacct gcacagccat accacagctt ccgatggctg cctgacgcca gaagcattgg
     7021 tgcaccgtgc agtcgagatg cgcgtcggca ccctggcgat caccgaccat gacaccacag
     7081 ctgcaatcgc gccagcaaga gaggaaattt cacgttcggg actggcgttg aatcttattc
     7141 ccggcgtgga aatttccacg gtctgggaaa atcatgaaat tcatattgtc gggctgaata
     7201 ttgatattac tcatccgcta atgtgtgagt tcctcgcgca gcagacagaa cggcgcaatc
     7261 agcgggcgca gctgattgcc gaaagacttg aaaaagcgca aatacctggg gcgctggaag
     7321 gcgcacaacg actggcgcag ggcggcgcag tgacgcgcgg tcattttgcg cgtttccttg
     7381 ttgagtgcgg caaagccagt tcaatggcgg atgtctttaa aaagtatctg gcgcgcggga
     7441 aaaccggata cgttccgcca cagtggtgta caatagaaca agctattgat gtcattcatc
     7501 attctggcgg taaggcggtg ctagctcatc ctgggcggta caatcttagt gctaaatggc
     7561 tgaaaagatt ggttgcgcat tttgccgaac accacggtga cgcgatggaa gtcgcgcagt
     7621 gccagcaatc gcccaatgaa cgtacccagc tggcggccct tgcgcgtcag catcatttat
     7681 gggcatcaca aggatctgat tttcatcagc catgcccgtg gatcgaactg ggtcgtaaac
     7741 tctggctgcc cgcaggcgtt gaaggcgtct ggcagctatg ggaacagccg cagaacacca
     7801 cagagaggga attatgagcc agttttttta tattcatcct gataacccac agcaacgtct
     7861 gatcaaccag gcggtggaga tcgtgcgtaa aggcggggtg attgtttatc caactgattc
     7921 cggctatgcg ctcggctgta aaattgaaga taaaaacgcg atggagcgta tttgtcgtat
     7981 tcgccagctg ccggacggtc acaactttac cctgatgtgt cgcgatcttt ctgaactctc
     8041 gacctattca tttgttgata acgttgcgtt tcgtttaatg aaaaacaaca cgccgggcaa
     8101 ctataccttc atcttgaagg ggacgaagga agtgccacgc cgtctgttgc aggaaaaacg
     8161 caaaaccatc ggtatgcgtg tgccttctaa cccgattgcg caggcgttgc ttgaagcact
     8221 gggcgaaccg atgctttcca cttcgctaat gctgccaggc agcgaattta ccgaatccga
     8281 tcccgaagaa attaaagacc gtctggaaaa acaggtagat ttgattattc acggcggcta
     8341 tctcgggcag aaaccgacaa cggttattga tcttaccgat gatacgccgg tcgtggtgcg
     8401 tgaaggcgta ggtgatgtga agcctttctt ataagtgcgt aactctgtat actacgcggc
     8461 cttaaaatgg cgctatacgg cgccattgat tctcctgttc gacgcctgtg aaggcgacac
     8521 taaaaggaag ctctatgagc gaaaaattac agaaagtgct ggcccgcgct ggccacggct
     8581 cccgccgtga aatcgaatct attattgaag ccggtcgtgt gagtgttgat ggcaaaattg
     8641 ctaaactcgg cgatcgcgtt gaagttaccc ctgggctgaa aattcgtatc gatggtcatc
     8701 tgatttcggt acgtgagtcc gctgaacaaa tttgtcgcgt tctggcctat tacaaaccgg
     8761 aaggtgagtt gtgtacccgt aacgatccgg aagggcgtcc gacggtgttt gaccgtctgc
     8821 caaagctgcg tggcgcacgc tggattgccg taggtcgtct ggacgttaac acctgtggtc
     8881 tactgctgtt caccaccgat ggtgaactgg caaaccgttt aatgcatcca agccgtgaag
     8941 ttgaacgtga atacgccgtg cgtgtatttg gtcaggttga cgacgcgaaa ctgcgtgatt
     9001 tgagtcgtgg cgtgcaactg gaagatggtc cggcagcttt taaaaccatc aagttcagcg
     9061 gcggcgaagg gatcaaccag tggtacaacg tgactctgac cgaaggccgt aaccgtgaag
     9121 ttcgtcgtct gtgggaagcg gttggtgtgc aggtgagccg cctgatccgt gttcgttacg
     9181 gtgatatccc actgccaaaa ggtctgccac gcggtggctg gacggagctg gacctcgccc
     9241 agactaacta tctgcgcgaa ctggtggagc taccgccaga aaccagctct aaagtcgctg
     9301 tagaaaaaga ccgtcgtcgc atgaaggcga atcagattcg tcgtgcggtg aaacgtcaca
     9361 gtcaggtgag cggcggtcgt cgttctggcg gacgtaataa cggttaatca aagtatgccg
     9421 gacgtcatat ccggcatttt tacagattag taatcaatcc ctatctgcgc ttttacaccg
     9481 gcatcaaacg catgtttgac ggggcgtaat tcacttaccg tatctgccag ttcaagaata
     9541 tcccgatgac aaccacgacc cgtgataatc accgtctgtt gatgtggacg ttcatttaac
     9601 gcctgcacca cttcttccag tggcaaatag tcatacgcca ccatatacgt cagttcatca
     9661 agcaaaacca tatccagtga ggaatcagca agcatccgct ttgcatgttg ccagacttcg
     9721 cggcaggcgg cggtatcaga ctcgcggttt tgtgtatccc aggtaaagcc cgttgccatc
     9781 acctgaaact caacgccatg tggctccagc agattgcgtt cgccattagg ccaggtgcct
     9841 ttaataaact gcacgacgcc tacttttttt ccgtgaccaa ctgcgcgtgt tgccgtacca
     9901 aatgccgcgg tggttttgcc ttttccattg ccggtaaaga cgatgataat accgcgttca
     9961 tcctgggcct gggccacacg agcatctact ttttctttca ctcgctgctg acgctgttgg
    10021 tagcgttcat cactcattgg gaaattcctg gtttacggcc cggttgggcg tcaaaggtca
    10081 tgccggtttt acggcggctg tcatcgccca tcagccagag gtagagcggc atgatatcag
    10141 cgggtgtttt aagtttctgt ggatcttcgg tcgggaaggc gctggcacgc attgcggtgc
    10201 gcgtaccgcc tgggttaatg cagttgacac gcaggcgctg ctgatattca tcggccagta
    10261 cctgcatcat cccttcggtg gcaaatttcg acgctgcata tgcaccccag ttagctcgtc
    10321 cctgacgtcc aacgcttgat gaagtaaaga ccagtgaacc ggcgtccgat ttgagtaata
    10381 aaggaagcag cgcctgggtg agcaaaaagg tggcattaac gttgacctgc atgacgtcct
    10441 gccagacctg cggattttgt tcgctgattg ggcaaacatc gccgagcaat ccggcattat
    10501 gcaaaacacc atccagacgc ggataattaa cggtaatgcg ctgtgccagt tgttggcaat
    10561 cttcggacgt gcaggtcagc aaatcgagaa taaaccactg tggctgacgt ccagtttctt
    10621 cgtttatgtg gctggctacc tgacgtaatt tttcttcatt acggcccaac agaatcactg
    10681 tcgcaccata gcgtgcatac gtcatcgcgg cttcacggcc aatcccatcg ctggctcccg
    10741 tcaccaggat aatgcgatca ttgagtaaat cttgttttgg ctggtaatgc atggctactc
    10801 ctcaacgacg ttgtctgtcg cgctgccagt gtactttatg actttggggc tttatgcctg
    10861 aaacagaagg gcatttcaat cagcctgggg cgataacacc gcaaaatgga tactttgtca
    10921 tactttcgct gcaataacat ctctgcgaga cggcttaaca tgcctgttgt aaactgtgag
    10981 ccaaagcgtt gtttaaccaa ggtggggact cgtggaattg ttgtctgaat atggtttgtt
    11041 tttggcgaaa atcgttaccg ttgtgctagc gattgcggcg attgccgcca ttattgtcaa
    11101 tgttgctcaa cgtaataaac gccagcgtgg cgagttacgg gtcaacaatc tcagcgaaca
    11161 gtataaggag atgaaagaag aactggccgc ggcgctgatg gactcacatc agcaaaaaca
    11221 gtggcacaaa gcgcagaaga aaaagcacaa gcaagaagcg aaagcagcaa aagcgaaagc
    11281 caaactgggc gaggtggcaa ctgacagtaa acctcgcgtc tgggtgctgg attttaaagg
    11341 cagcatggac gcccatgaag tgaactcgct acgtgaagag ataacggctg tactcgcagc
    11401 attcaaaccg caggatcagg ttgtgctacg tctggaaagc cctggtggca tggtgcatgg
    11461 ttacgggttg gcggcttcgc agctgcagcg tctgcgtgat aaaaacattc ctttaactgt
    11521 tacggtagac aaagtcgctg ccagcggcgg ttacatgatg gcctgtgtgg cggacaaaat
    11581 tgtttccgca ccgtttgcta ttgtgggttc cattggggtg gtggcgcaaa tgcccaactt
    11641 taaccgcttc ctgaaaagca aagatattga tatcgaactg cacactgccg ggcagtataa
    11701 gcgtactctg acgttgctgg gtgaaaatac cgaagaaggg cgggagaaat tccgcgaaga
    11761 gttgaacgaa acgcatcagt tgtttaaaga ttttgtgaag cgtatgcgtc cgtctctgga
    11821 tattgaacag gtggcaacgg gtgaacactg gtacggacaa caggcggtag agaaaggcct
    11881 ggttgatgaa atcaacacca gtgatgaagt tattcttagc ctgatggaag gccgtgaagt
    11941 ggttaatgta cgctatatgc agcgtaaacg actcattgac cgattcaccg gcagcgcggc
    12001 agagagcgcc gatcgattgt tgctacgctg gtggcagcgg ggtcaaaagc cattgatgta
    12061 aaagacaaac gcgaggctaa gacctcgcgt tttgctttaa tcaaccagat gatatttttc
    12121 tgaaagcaca tgggccaggt gtttgaacat attaaacacc gcggtgcttt tggctgttgg
    12181 caatccttgt tcatctaaaa agtagtcgcc ggtaaatacc agcacgccat tacgctgcgt
    12241 gacgccggtg gcttcaatcc ctgcgagcgt atcctcatgc tcacgaatga ttttgttggc
    12301 ctctttcaac agcgtttcgc ggtcgatggg ttgtgtctct ttgttcatta tttactcctt
    12361 aaacaaggac attagtctac gccaggcatg gcttgcagac aaatatacca cgctggtggc
    12421 aagagcgcct tactggcaac tttggatttt gcatgctaat aaagttgcgt atcggatttt
    12481 atcaggtaca gtgtgacgct ttcgtcaatc tggcaataga tttgcttgac attcgaccaa
    12541 aattccgtcg tgctatagcg cctgtaggcc aagacctgtt aactcagtca cctgaatttt
    12601 cgtgaacaga gtcacgacaa ggggttgata tccgcagaga acgagtccat atcggtaact
    12661 cgttgccagt ggaaggttta tcaacgtgcg acgcattcct ggaagaatca aattaggtaa
    12721 ggtgaatatg ggtaaagctc ttgtcatcgt tgagtccccg gcaaaagcca aaacgatcaa
    12781 caagtatctg ggtagtgact acgtggtgaa atccagcgtc ggtcacatcc gcgatttgcc
    12841 gaccagtggc tcagctgcca aaaagagtgc cgactctacc tccaccaaga cggctaaaaa
    12901 gcctaaaaag gatgaacgtg gcgctctcgt caaccgtatg ggggttgacc cgtggcacaa
    12961 ttgggaggcg cactatgaag tgttgcctgg taaagagaag gtcgtctctg aactgaaaca
    13021 actggctgaa aaagccgacc acatctatct cgcaaccgac cttgaccgcg aaggggaagc
    13081 cattgcatgg cacctgcggg aagtgattgg gggtgatgat gcgcgctata gccgagtggt
    13141 gtttaacgaa attactaaaa acgcgatccg ccaggcattt aataaaccgg gtgagctgaa
    13201 tattgatcgt gttaatgccc agcaggcgcg tcgctttatg gaccgcgtgg tggggtatat
    13261 ggtttcgccg ctgctatgga aaaagatcgc tcgtggtctg tctgccggtc gtgtgcagtc
    13321 ggtggcggtt cgcctggtgg tcgagcgtga gcgtgaaatt aaagcgttcg tgccggaaga
    13381 gttctgggaa gtcgatgcca gcacgaccac gccatctggt gaagcgttgg cgttacaggt
    13441 gactcatcag aacgacaaac cgttccgtcc ggtcaacaaa gaacaaactc aggctgcggt
    13501 aagtctgctg gaaaaagcgc gctacagcgt gctggaacgt gaagacaaac cgacaaccag
    13561 taaacctggc gctcctttta ttacctctac gctgcaacaa gctgccagca cccgtcttgg
    13621 atttggcgtg aaaaaaacca tgatgatggc gcagcgtttg tatgaagcag gctatatcac
    13681 ttacatgcgt accgactcca ctaacctgag tcaggacgcg gtaaatatgg ttcgcggtta
    13741 tatcagcgat aattttggta agaaatatct gccggaaagt ccgaatcagt acgccagcaa
    13801 agaaaactca caggaagcgc acgaagcgat tcgtccttct gacgtcaatg tgatggcgga
    13861 atcgctgaag gatatggaag cagatgcgca gaaactgtac cagttaatct ggcgtcagtt
    13921 cgtagcctgc cagatgaccc cagcgaaata tgactccacg acgctgaccg ttggtgcggg
    13981 cgatttccgc ctgaaagcac gcggtcgtat tttgcgtttt gatggctgga caaaagtgat
    14041 gcctgcgttg cgtaaaggcg atgaagatcg catcttacca gcagttaata aaggcgatgc
    14101 tctgacgctc gttgaactta caccagccca gcactttacc aagccgccag cccgtttcag
    14161 tgaagcatcg ctggttaaag agctggaaaa acgtggtatc ggtcgtccgt ctacctatgc
    14221 gtcgatcatt tcgaccattc aggatcgtgg ctacgtgcga gtagaaaatc gtcgtttcta
    14281 tgcggaaaaa atgggcgaaa tcgtcaccga tcgccttgaa gaaaatttcc gcgagttaat
    14341 gaactacgac tttaccgcgc agatggaaaa cagcctcgac caggtggcaa atcacgaagc
    14401 agagtggaaa gctgtactgg atcacttctt ctcggatttc acccagcagt tagataaagc
    14461 tgaaaaagat ccggaagagg gtggtatgcg cccgaaccag atggttctga ccagcattga
    14521 ctgcccgact tgtggtcgca aaatggggat tcgcacagcg agcaccgggg tattccttgg
    14581 ctgttctggc tatgcgctgc cgccgaaaga gcgttgcaaa accaccatta acctggtgcc
    14641 ggaaaacgaa gtgctgaacg tgctggaagg cgaagatgct gaaaccaacg cgctgcgcgc
    14701 aaaacgtcgt tgcccgaaat gcggcacggc gatggacagc tatctcatcg atccgaaacg
    14761 taagttgcat gtctgtggta ataacccaac ctgcgacggt tacgagatcg aagagggcga
    14821 attccgcatt aaaggttatg acggcccgat cgttgagtgt gaaaaatgtg gctctgaaat
    14881 gcacctgaaa atggggcgtt tcggtaaata catggcctgc accaacgaag agtgtaaaaa
    14941 cacacgtaag attttacgta acggcgaagt ggcaccaccg aaagaagatc cggtgccatt
    15001 acctgagctg ccgtgcgaaa aatcagatgc ttatttcgtg ctgcgtgacg gtgctgccgg
    15061 tgtgttcctg gctgccaaca ctttcccgaa atcgcgtgaa acgcgtgcgc cactggtgga
    15121 agagctttat cgcttccgcg accgtctgcc ggaaaaactg cgttatctgg ccgatgcgcc
    15181 acagcaggat ccggaaggta ataagaccat ggttcgcttt agccgtaaaa ccaaacagca
    15241 atatgtctct tcggaaaaag acggaaaggc gactggctgg tcagcatttt atgttgatgg
    15301 caaatgggtt gaaggaaaaa aataaccttt aattctgtca ggtttttata aacaaagggt
    15361 cgcgaaagcg gccctttttt attgcatatt attt
//
LOCUS       DAPGWB010000105        15239 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.106, whole genome shotgun sequence.
ACCESSION   DAPGWB010000105 DAPGWB010000000
VERSION     DAPGWB010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15239
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.106"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            39..605
                     /locus_tag="RHX79_003155"
     CDS             39..605
                     /locus_tag="RHX79_003155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HDV2198299.1"
                     /translation="MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGW
                     YHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLQSYSPMTRLGAKAGHLALYLLLF
                     AIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG
                     FMALKHHFIDKDDTLKRMLGKSSSDYGV"
     gene            609..1184
                     /locus_tag="RHX79_003156"
     CDS             609..1184
                     /locus_tag="RHX79_003156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HDV2198300.1"
                     /translation="MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLG
                     YSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKY
                     PLATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGK
                     IKLKDFNIKTDLGPASQEVDLIISVEGVQQK"
     gene            complement(1226..2278)
                     /locus_tag="RHX79_003157"
     CDS             complement(1226..2278)
                     /locus_tag="RHX79_003157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706977.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HDV2198301.1"
                     /translation="MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDA
                     LYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDD
                     GKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYE
                     YEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGF
                     NKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDS
                     HTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNK
                     SRGRLNTTLGIPDPTE"
     gene            2503..3423
                     /gene="lpxL"
                     /locus_tag="RHX79_003158"
     CDS             2503..3423
                     /gene="lpxL"
                     /locus_tag="RHX79_003158"
                     /EC_number="2.3.1.241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) lauroyltransferase"
                     /protein_id="HDV2198302.1"
                     /translation="MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGL
                     GKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDR
                     RIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL
                     IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQ
                     AATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKV
                     VEKCIMMAPEQYMWLHRRFKTRPEGVPSRY"
     gene            3595..4821
                     /gene="mdtG"
                     /locus_tag="RHX79_003159"
     CDS             3595..4821
                     /gene="mdtG"
                     /locus_tag="RHX79_003159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtG"
                     /protein_id="HDV2198303.1"
                     /translation="MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQL
                     GVTGHSALNMWSGIVFSITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMG
                     LAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPM
                     AGGLLADSYGLRPVFFITASVLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNP
                     KLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAP
                     RLGKLGDRIGPEKILITALIFSVLLLIPMSYVQTPLQLGILRFLLGAADGALLPAVQT
                     LLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAV
                     YSWNSLRRRRIPQVSN"
     gene            4904..5278
                     /locus_tag="RHX79_003160"
     CDS             4904..5278
                     /locus_tag="RHX79_003160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309456.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HDV2198304.1"
                     /translation="MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQD
                     GDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGE
                     FQLEPPLDTEEGRAAADEWDER"
     gene            complement(5279..5506)
                     /locus_tag="RHX79_003161"
     CDS             complement(5279..5506)
                     /locus_tag="RHX79_003161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HDV2198305.1"
                     /translation="MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDS
                     AWRYVTILDLPFSLVFDTLLLPIDIHHGPYE"
     gene            complement(5679..8222)
                     /gene="mdoH"
                     /locus_tag="RHX79_003162"
     CDS             complement(5679..8222)
                     /gene="mdoH"
                     /locus_tag="RHX79_003162"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HDV2198306.1"
                     /translation="MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWARED
                     DSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRF
                     WDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL
                     PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ
                     LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAK
                     HFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRR
                     WGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA
                     TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF
                     VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP
                     VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL
                     AIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF
                     HTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLF
                     WLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVDTDRFLEMNRQ
                     RSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR
                     LVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ"
     gene            complement(8215..9750)
                     /gene="mdoG"
                     /locus_tag="RHX79_003163"
     CDS             complement(8215..9750)
                     /gene="mdoG"
                     /locus_tag="RHX79_003163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoG"
                     /protein_id="HDV2198307.1"
                     /translation="MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYEAPK
                     SNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA
                     VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI
                     GAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAY
                     KFVVMPGRDTVVDVQSKIYLREKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNG
                     LSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPS
                     AWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDED
                     KLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTS
                     IGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLP
                     ANE"
     gene            10144..11301
                     /gene="mdoC"
                     /locus_tag="RHX79_003164"
     CDS             10144..11301
                     /gene="mdoC"
                     /locus_tag="RHX79_003164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706958.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoC"
                     /protein_id="HDV2198308.1"
                     /translation="MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEP
                     SLWLTLFNDFIHSFRMQVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLL
                     TLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRI
                     RNNLENSDKTNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTL
                     FYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETES
                     VITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI
                     TSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR"
     gene            complement(11309..12790)
                     /gene="clsC"
                     /locus_tag="RHX79_003165"
     CDS             complement(11309..12790)
                     /gene="clsC"
                     /locus_tag="RHX79_003165"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706957.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsC"
                     /protein_id="HDV2198309.1"
                     /translation="MMKKTPTSTKDSLPNKEMNDLPRLASAVLPLCSQHPGQCGLFPL
                     EKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRLLFSALLAAAKRGVRVRLLLDDN
                     NTPGLDDILRLLDSHPRIEVRLFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVV
                     TLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDV
                     PEGEMADRIELPASWHNDAMTHRYLRKMESSPFINHLVDGTLPLIWAKTRLLSDDPAK
                     GEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTN
                     SLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKT
                     FSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDR
                     WGRINWVDRHAKKEIILKKEPATSFWKRVMVRLASILPVEWLL"
     gene            complement(12732..13265)
                     /gene="ymdB"
                     /locus_tag="RHX79_003166"
     CDS             complement(12732..13265)
                     /gene="ymdB"
                     /locus_tag="RHX79_003166"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HDV2198310.1"
                     /translation="MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGP
                     ALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYL
                     NSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYD
                     EENAHLYERLLTQQGDE"
     gene            complement(13360..13671)
                     /locus_tag="RHX79_003167"
     CDS             complement(13360..13671)
                     /locus_tag="RHX79_003167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDV2198311.1"
                     /translation="MFRPFLNSLMLGSLFFPFIAIAGSTAQGGVIHFYGQIVEPACDV
                     STQSSPVEMNCPQNGSVPGKTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEY
                     N"
     gene            complement(13792..14124)
                     /gene="csgC"
                     /locus_tag="RHX79_003168"
     CDS             complement(13792..14124)
                     /gene="csgC"
                     /locus_tag="RHX79_003168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli assembly protein CsgC"
                     /protein_id="HDV2198312.1"
                     /translation="MNALLLLAALSSQITFNTTQQGDVYTIIPEVTLTQSCLCRVQIL
                     SLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQ
                     WPPSSEKS"
     gene            complement(14183..14638)
                     /gene="csgA"
                     /locus_tag="RHX79_003169"
     CDS             complement(14183..14638)
                     /gene="csgA"
                     /locus_tag="RHX79_003169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curlin major subunit CsgA"
                     /protein_id="HDV2198313.1"
                     /translation="MKLLKVAAIAAIVFSGSALAGVVPQYGGGGNHGGGGNNSGPNSE
                     LNIYQYGGGNSALALQTDARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSAT
                     LDQWNGKNSEMTVKQFGGGNGAAVDQTASNSSVNVTQVGFGNNATAHQY"
     gene            complement(14679..15134)
                     /gene="csgB"
                     /locus_tag="RHX79_003170"
     CDS             complement(14679..15134)
                     /gene="csgB"
                     /locus_tag="RHX79_003170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curlin minor subunit CsgB"
                     /protein_id="HDV2198314.1"
                     /translation="MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFN
                     QAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDA
                     SISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR"
BASE COUNT         3792 a         3921 c         3634 g         3892 t
ORIGIN      
        1 cattttcttt ctctcgcaaa ttcgttttgg atgcacttat gtcattcaca aatacccctg
       61 aacgctatgg tgttatatct gcggccttcc attggctaag cgcaattatt gtctacggca
      121 tgtttgcttt aggtctgtgg atggtcacgc tcagttatta cgatggctgg tatcacaaag
      181 cacccgaact gcataaaagc atcggtattt tgttgatgat ggggctggtt attcgcgttc
      241 tgtggcgcgt catatctcca ccgccgggtc cgctgcagag ttattcgccc atgactcgtc
      301 ttggcgcaaa ggctggacat ctcgcattgt acttattgct gttcgccatc ggcatcagcg
      361 gctatctgat ctcaactgcc gatggtaaac cgatcagcgt ttttggctgg tttgacgtcc
      421 ccgcgaccct cgccgacgct ggcgcacagg ctgactttgc cggtgccctg catttttggc
      481 tcgcgtggag cgtcgtagta ctgtccgtta tgcacggatt tatggccctg aagcatcatt
      541 tcatcgataa agacgacact ctgaagcgca tgctgggaaa gtcgtcatct gactatggag
      601 tataaaaaat gaaaaaaagc ctgcttggtt taaccttcgc ttccctgatg ttctctgccg
      661 gttcagcggt tgccgccgat tacaaaattg acaaagaagg tcagcacgcc tttgttaact
      721 tccgcatcca gcatcttggc tatagctggt tatatggcac ctttaaagat ttcgacggta
      781 cttttacctt tgatgaaaaa aatccggctg ccgataaagt gaatgtgaca attaacacca
      841 ccagcgtcga tactaatcac gccgaacgcg ataaacatct tcgcagtgca gatttcctca
      901 atactgcaaa atatccactg gcaacattca cctccaccag cgtgaagaaa gacggtgacg
      961 aattggatat taccggcgat ctgacgctga atggcgtaac caaacccgtc acgctggaag
     1021 cgaaattaat tggtcaaggc gacgacccgt ggggtggtaa acgtgcaggc ttcgaggccg
     1081 aaggcaaaat taagctcaag gacttcaata tcaaaacaga tttaggtcca gcttctcagg
     1141 aagtggatct gattatttca gtggaaggcg tacagcagaa gtaagcgtga aatgttgccg
     1201 gatggcacgc atccggcaat gatatttatt ctgttggatc aggaatgccc agtgttgtat
     1261 tcagacgtcc acgagactta ttaaagatct tattgccatt ttcacgtcct gcccgacggc
     1321 gtcgctgttc ttcaggcggt aacgcgcttt cttcgcagca aatctcacta caacaacctt
     1381 tgtatttttc cgcacatact ggacactgaa taaaaagcag gtggcagcca tcatttttac
     1441 agttggtatg gctgtcgcac ggcgcaccgc actggtggca atgcgcgata atctcatcag
     1501 agatacgttc gcccatccgc tcgtcaaaaa caaaattttt gccaataaaa cgcaccggca
     1561 agccctgctc gcgcgcctta cgggcgtatt caataattcc gccctcgata tgccagactt
     1621 tgttgaatcc gttatgtttc atccaggcac tggctttttc acaacgaatg ccgccggtgc
     1681 agtacatgac gattttttta tctttatgtg cctgcatcat ctcgactgct tttggcaact
     1741 gctcacggaa ggtatctgcc ggaatttcca gcgcgttttc aaagtgcccc acttcatact
     1801 catagtggtt acgcatgtcg ataaacagtg catcgggatc gtcaagcatg gcgttcactt
     1861 ccgccgcttg caaatactca ccaacattac tggcatcgaa gtgaggatca tcaataccgt
     1921 cggcaacaat gcgatcgcgt accttcatgc gcagtaccca gaaggatttc ccgtcatcat
     1981 ccaacgcgat attcaggcgt aaaccctcta aagccgggtc gaaggcatag agctgcgcgc
     2041 gaaatgtttc aacattgctc gcaggtacgc tgatttgcgc gttaatgccc tcatgcgcca
     2101 gatacactcg cccaaaaaca ttcagcgcgg taaacagctg atataaagcg tcacgggtcg
     2161 ccttaggatc ggcgatgtgg aaatacttgt aaaacgaaat ggtggttcgc ggttcgctct
     2221 cagccaacat tttggctttt agcgcgtcgt tggaaatgcg gttgtgtaac actggcatgg
     2281 tgtacggttc ctgcgagatg ggaaagtaaa aatccgcggc atgatatagc aattatcgat
     2341 aattaacatc cacacatttt acgctacatt tgcgcattaa aaattatttg ttatttacaa
     2401 gcgcggcaat ttcgcccagt cttcagccac aaattttggt tgcgggcgaa aaaatgcgac
     2461 aatacataca attgcccgaa taggttgaaa aacaggattg atatgacgaa tctacccaag
     2521 ttctccaccg cactgcttca tccgcgttat tggttaacct ggttgggtat tggcgtactt
     2581 tggttagtcg tgcaattgcc ctacccggtt atctaccgcc tcggttgtgg attaggaaaa
     2641 ctggcgttac gttttatgaa acgacgcgca aaaattgtgc atcgcaacct ggaactgtgc
     2701 ttcccggaaa tgagcgaaca agaacgccgt aaaatggtgg tgaagaattt cgaatccgtt
     2761 ggcatgggcc tgatggaaac cggcatggcg tggttctggc cggaccgccg aatcgcccgc
     2821 tggacggaag tgatcggcat ggaacacatt cgtgacgtgc aggcgcaaaa acgcggcatc
     2881 ctgttagttg gcatccattt tctgacactg gaactgggcg cgcggcagtt tggtatgcag
     2941 gaaccgggga ttggcgttta ccgcccgaac gataatccac tgattgactg gctacaaacc
     3001 tggggccgtt tgcgctcaaa taaatcgatg ctcgaccgca aagatttaaa aggcatgatt
     3061 aaagccctga aaaaaggcga agtggtctgg tacgcaccgg atcatgatta cggcccgcgc
     3121 tcaagcgttt tcgtcccgtt atttgccgtt gagcaggctg cgaccacgac cggaacctgg
     3181 atgctggcac ggatgtccgg cgcatgtctg gtgcccttcg ttccacgccg taagccagat
     3241 ggcaaagggt atcaattgat tatgctgccg ccagagtgtt ctccgccact ggatgatgcc
     3301 gaaactaccg ccgcgtggat gaacaaagtg gtcgaaaaat gcatcatgat ggcaccagag
     3361 cagtatatgt ggttacaccg tcgctttaaa acacgcccgg aaggcgttcc ttcacgctat
     3421 taaatctccc ctgccggatg cttcagaatg gcatccggca ttaccacagc aaatccccct
     3481 gatttagcga taaaagctct ctggattgcg ccccctggaa gtcgggcgca taattagtgt
     3541 gcttatcttt tcttcttatg ttcaccgcgc ctggcgcacc aacagcggat tgctatgtca
     3601 ccctgtgaaa atgacacccc tataaactgg aaacgaaacc tgatcgtcgc ctggctaggc
     3661 tgttttctta ccggtgccgc cttcagtctg gtaatgccct tcttacccct ctacgttgag
     3721 cagcttggcg ttaccggtca ctccgccctg aatatgtggt ccggtattgt cttcagcatt
     3781 acatttttat tttcggccat cgcctcaccg ttttggggtg gactcgccga ccgtaaaggc
     3841 cgaaaactca tgctattacg ctctgccctc ggcatgggca tcgtgatggt gttgatggga
     3901 ctggcacaaa atatctggca gtttttgatc ctacgggcgc ttcttgggtt acttggcgga
     3961 tttgtcccca acgctaatgc tcttatcgcc acacaagtac cgcgtaataa aagcggctgg
     4021 gcgctgggta cgctctccac aggcggcgtt agtggtgcgt tgctcggccc aatggctggc
     4081 ggcctgctcg ccgatagcta cggcttacgt ccggtattct ttattaccgc cagtgtgctc
     4141 atactctgct ttttcgtcac cctgttctgc atcagagaaa aattccagcc ggtcagcaaa
     4201 aaagagatgc tgcacatgcg ggaagtggtg acatcactta aaaacccgaa actggtactc
     4261 agcctgtttg tcaccacgtt aatcatccag gtggcgacag gctcaattgc ccccattctg
     4321 acgctgtatg tccgcgaact ggcgggtaac gtcagtaacg tcgcctttat cagtggcatg
     4381 atcgcctcgg tgccaggcgt ggcggctctg ctaagcgcac cacgactcgg caaacttggc
     4441 gatcgaatcg gacccgaaaa gatcctgatt acagcgctga tcttttctgt actgctgttg
     4501 atcccaatgt cttacgttca gacgccattg caacttggga ttttacgttt tttgctcggt
     4561 gccgccgatg gtgcactact ccccgccgta cagacactgt tggtttacaa ctcgagcaac
     4621 cagatcgccg ggcgtatctt cagctataac caatcgtttc gtgatattgg caacgttacc
     4681 ggaccattga tgggagcagc gatttcagcg aactacggtt tcagagcggt atttctcgtc
     4741 accgctggcg tagtgttatt caacgcagtc tattcatgga acagtctacg tcgtcgtcga
     4801 ataccccagg tatcgaactg atttttcgcc tttcatactt gcaaaagcgg agaatcagct
     4861 atccttttcc ctgaaacctc atcaactcaa agggagaatc gtgatgacca tgtacgcaac
     4921 gcttgaagaa gccattgacg ctgcacgcga agaatttctt gcagacaacc ccggcatcga
     4981 cgccgaagat gcgaatgtgc aacagttcaa tgcccaaaaa tacgttttgc aggacggcga
     5041 catcatgtgg caagttgagt tttttgccga cgaaggggaa gaaggtgaat gtttacctat
     5101 gcttagcggt gaagccgcgc aaagtgtttt tgatggcgac tatgatgaga tagagatacg
     5161 ccaggagtgg caggaagaga atacattaca tgaatgggac gagggggaat ttcagcttga
     5221 gccaccgctg gataccgagg aaggacgcgc agcagctgat gagtgggatg aacgttaatc
     5281 actcatacgg gccatgatga atgtcgatcg gcagcagtaa agtatcaaaa accagagaga
     5341 atggcagatc aaggatcgtg acataacgcc aggcggagtc acgcacatcc cattgcacac
     5401 cgggataata ttggttgcca tgcccctgcc ccggtatagt gcgactaata atgctgccac
     5461 agccactcag caaggtcacc atgatgctca ccacaattaa acgcatttga tacctctttc
     5521 gtaaaaaaat accggcataa cgccggtatt tttattggct cgttgttttt gccggatgcg
     5581 gcgtgaacgc cttatccgac ccacaaaatc ttgcaaaatc aataaattgc aggaacgatg
     5641 taggcctgat aagcgtagcg catcaggcaa ctacgttttt attgcgaagc cgcatccggt
     5701 ttacgcaatg ccagtggatt gagctttatc ccttcgtaat aactcaccca tgaagaatat
     5761 ctctccgggg aattccagac gcggaaatgc agacgggcca tcgtcaccgg atcgcttagc
     5821 agcaccaggc gacgatcgcg attcagcttc tctggcgtct cgttcagcgc ctgttcaacg
     5881 tggcggtcac gggcgatttc cagcacctta ctggcgcggt gacgcgcggt cgccattgcg
     5941 gttgccagag cgttaaatga cgggttaaac actgcgtgca taaagccatc atcaagggag
     6001 cgttgacgat tcatctcaag gaaccgatcg gtatcaacca gcacctgcgg cggcgaatac
     6061 tcttccggga tcaggaacag tttccagcgt ttggtgcgca gaccaacggt ggcacggctg
     6121 gaaatcaccg aaacaaacgg tgacaggatc aacgagaaga caatcggtgc cagccagaac
     6181 aggaaacgca gatccaacca cgccatacca acagcccaca ctaaccctaa cagcagctgt
     6241 gagccgtggc gtttgaacgc ttcaccccag gaagtggagt catcatcacg ctgcggtgaa
     6301 ttccacacca cttcccagcc aaggaacgcg ctgacaacga agaccgtatg gaacagcatg
     6361 cgtaccggag ccagcagcac ggaaaaaagc acttccagca gcaacgataa tgtaacgcgc
     6421 cagaagccgc cgtattcttt cgttcctttg caccagataa gcaaaatgct caataacttc
     6481 ggcaggaaca acagcaccat agtcgaagca aaaagtgcaa tcgccagctc aggacgccac
     6541 tgcggccaca ccgggaacaa ctgccgtggt tgcaggaagt attgcggttc ggtcaacgca
     6601 tgtactacct gcaatgcagt agagagcgcg aggaacataa accacagcgg agcggagaga
     6661 taagacatca cgcccgtcag gaataccgca cggtgaaccg ggtgcatacc cttcaccagg
     6721 aacagacgga agttcatcag gttaccgtgg caccagcggc ggtcacgttt tagctcatca
     6781 agcaagttag gcggcaattc ttcataagaa cccgggagat cgtaagcaat ccagaccccc
     6841 caacctgcac ggcgcatcaa cgccgcttcc acgaagtcat gtgacaggat tgaaccggca
     6901 aaggaacctt cgcccggcag cggagccagt gcgcagtgct cgataaacgg tttcacgcgg
     6961 ataatcgcgt tatgtcccca gtagtgcgac tcgccaagtt gccagaagtg caaaccggct
     7021 gtaaacagtg gcccatacac gcgggtcgcg aactgctgac agcgcgcata cagcgtatcc
     7081 ataccggacg ctttcggcga cgactgaatg atcccggcgt tcgggttggc ttccatcagg
     7141 cgcaccaggc cgcataaaca atcaccggtc attaccgagt cagcatccag caccaccatg
     7201 tagctgtact gactgcccca gcgacggcag aagtcatcga tattaccgct tttacgcttc
     7261 acgcggcgac ggcggcggcg atagaaaatc tgaccttcgc caccgacttc agcgataagc
     7321 tccatccagg ctttttgctc tgcgacgcag atatccgggt tataactgtc actaagaatg
     7381 tagacatcaa agtgtttggc attcccggtg gcttttactg attcccacgt tgcacgcagg
     7441 ccagcaaaaa cacggttcac gtcttcgtta cagataggca tgatcaacgc cgtgcgatgc
     7501 tccgggttta atggttcatc gccaactgtt gacgcagata tactgtattt atcgcgacca
     7561 ataagcagtt gcaggaagcc cattaacgcc gtccagaatc cggcggacac ccaacagaac
     7621 agtaccgcaa agaggatcag gataccggtt tgcagcatat aaggcagaag ctgcataaag
     7681 gaaacccaca aatcctgacc aaccatatcc ataggattaa tcagcgccca accctgataa
     7741 ggaagaatgg tcttcatata ccaggtcgcg acgacagttt gcgcgagcgt caggatcaac
     7801 agaatgtaac ggcggatggt accgacggta cgccactttt gctcgctctc ctgctcttct
     7861 ttggtcaaac gagccagata gcgcggcgtg acatcgcgtc cacgcaggcg atcccagaaa
     7921 cggcctaccg ggttggtacg ccacgggtcg ggaaacatcg aggagcgttt tgcttctggc
     7981 atcgccttca gctgatcgcg cccttcgtcg tctttaatta actgtccatc agcaagtgaa
     8041 tctggccagg cttgttccag acgcgccttt accgagcctt gcggggaatc atcctcccgc
     8101 gcccaggtgc ggtgttcggc atccagcgcc tgatgaacgg cgcggatatc agtcttcggc
     8161 aatgccgctt tctcgcttgc ggcgatgggc attgcgtcaa tgtactcagt tgtcttattc
     8221 attggcaggt aactggtagc tccaggtttc actcaacgtc tgatcggcat tcaccagcgc
     8281 agcacgcatt tcagtggttt tcttggcatc tttcactttc acacgcatca ccagacgcca
     8341 gcctttggta accgggttat agcgcaccgt gctttcaact atctcaccat tatcaccaat
     8401 gctggtttgc gctgtgaccg gggtatcctc tggcagtttt ttcatctctg cgccggtaaa
     8461 atcgaccaca aaggcgatag taccgtcagg ctggcgaatc aggttcgact gcttcacatc
     8521 ccccgttgaa cgacgcgttt gttgcaccca tgcgttatct ggcgcatgca gtttgtcttc
     8581 atcacggctg aaggtgatgg tgtatttaaa gttcatctct ttacccggct ccggcagctg
     8641 atccggcgtc cagtaagcga cgatgttatc gttggtttca tcgttggttg gaatttccac
     8701 cagctcaacg ctgcctttac cccactcccc tttcggagtc acccatgcgc ttggacgaag
     8761 atcgtaacga tcatcgagat cttcaaagcg ggagaaatca cgaccgcgct gcaacagacc
     8821 gaagccttgc gggttctcca tcgagaagct gctgaccgct aaatgtttcg ggttattcaa
     8881 cggacgccag atccattcgc cattaccggc atggatagac agaccgttag agtcgtgcaa
     8941 ctccggacga tagttatttg caggcgacgg ttggttcggc ccaaacagga acatactggt
     9001 taacggtgca acccccagtt tgccgacttt ctcgcgcaga tagattttcg actgcacatc
     9061 cacaaccgtg tcacgccctg gcataaccac gaatttgtaa gcacctgtcg cgcgcggcga
     9121 gtcaagcaat gcataaatgg ttaaacgttt atcagtcggt tttggacgct cgatccagaa
     9181 ctctttgaag cgtggaaatt cttcacccga tggcaaggcg gtatcaattg ccaggccgcg
     9241 ggcagaaagg ccataaacct gacctgcacc aatcacgcgg aaatagctgg ccccgagcat
     9301 gctgacgatt tcatcgtttt tatctttgct gttgatcggg taaagcactt taaaaccggc
     9361 aaaaccaagg tcttttaccg tgtctttgtc atgctgaaca tcgccgaaag tgaaataatc
     9421 cgggctgtat ttgattcgtt tgactgcggt ggcagtcact tcatttattt tgaccggggt
     9481 atcgaagtac ataccctgat ggtagaactc gagtttgaat ggggtcttca gattgttcca
     9541 gtacgctttg tcatgattaa actggatctg ctgatagtcc gcgtatttca tatcgcggaa
     9601 aacggagggc aagttgcttt tgggcgcctc atagcctttc ccggctaagg attgagcttg
     9661 ctttgcgaca tcatcaatac tgaaagccca gcttgaagat gtatacaggg ttaacattac
     9721 tgcagcactc aaccaacgca ttttcatcat ttgtagttta tgtttcataa ttagtaagca
     9781 cttccccctt tgtgtgctta tatcgatccg atctatttta atggataacc agccattccg
     9841 acaacagaat cccggtatcg ttcagcacgc tggctcatgg attaagcacc tgattgcaac
     9901 cgttttcact ttccgtgctt ctcctaaaga cagaagcatc gacttcgtgt agggtttgcc
     9961 agcaatttta tttatcaacc gtcttacaga cgcttccatt ctggttagtg gtagcgatga
    10021 tgctatgcat aaaaaccttg aagcctgcgc ctggcgcggt caggtcggtg tcgctatggc
    10081 aacaagccta aaggcataac ccgacaggga taagacgaaa aatccgagat tagttaacca
    10141 tatatgaatc cagtacccgc gcaacgtgaa tatttcctcg actccatccg cgcctggctg
    10201 atgttgttag ggatcccttt tcatatttct ttaatctatt cgagccatac atggcatgtg
    10261 aatagcgccg aaccgtcatt gtggctgacc ctttttaatg acttcatcca ctcgttccgc
    10321 atgcaggtat ttttcgttat atccggctac ttttcctaca tgcttttttt acgctatccc
    10381 ttgaaaaaat ggtggaaagt acgtgtcgaa cgtgtaggta tcccgatgtt aacagccatc
    10441 cccctactga cattgccgca atttattatg ctgcaatacg tcaaagggaa agcggaaagt
    10501 tggcctgggc tgtcattgta tgacaaatat aatacgttgg cctgggaatt aatatcacac
    10561 ctgtggtttt tactggtgtt agtagtcatg acgacgctgt gcgtatggat atttaaacgc
    10621 atcagaaata atttagaaaa ttctgataaa acgaataaaa aattctcgat ggtaaaacta
    10681 tcggtgattt ttttatgcct cggcatcggc tatgcggtaa taagaagaac gatttttatt
    10741 gtgtatccgc ccattctgag taatggcatg ttcaatttta ttgtcatgca aacgctattt
    10801 tatttgccgt tctttatcct cggtgcactg gctttcattt tccctcatct taaagccttg
    10861 tttaccacgc cgtctcgtgg ctgtaccctt gcagcagcat tggcatttgt cgcttattta
    10921 ctcaaccagc gctatggcag tggagatgcc tggatgtacg aaaccgagtc ggtgatcacc
    10981 atggtcctcg gtctgtggat ggtgaatgtg gtcttctcct ttggccaccg tttgcttaac
    11041 ttccagtcag cgcgggtgac ttactttgtt aacgcatcgc tatttatcta tctggttcac
    11101 cacccgttaa cgctgttttt cggcgcatac attacaccgc acatcacctc caactggctt
    11161 ggttttctct gtggcctgat attcgtagta gggattgcga taattctgta tgaaattcat
    11221 ttacgcatcc cgttactgaa gtttttgttt tctggtaaac cggttgttaa gcgtgagaac
    11281 gataaagcac cagcccgtta agccacattt acaataacca ttccacgggc aatatcgacg
    11341 ccagtctgac cataacccgc ttccagaaac tggtggcggg ttcttttttg agaataatct
    11401 ctttctttgc atgacgatca acccagttga tccgtcccca cctgtccaga cggagctgcc
    11461 aggccgcatc atactggctc tgaataaagc gtttatcaat taactgtgcc agcgtttcgc
    11521 tctctatcac gaagcccatt tcagtattga gcaatgttga acgcggatcg aaattgaaag
    11581 agccgataaa caccgtttta ccatcgatgc taaaggtttt agcatgcagg ctggctccgg
    11641 aattaccggt tatgccgcga tcgtgtaacg tactactttg ttcacgcgtc ggcttgagtt
    11701 catataattc cacgccatag cggagcaatt ttttgcgcca gcgcgcgtat ccggcatgga
    11761 cgacagcaac atcgttagcg gcaagagaat tggttaggat cgcaatcttt accccttttc
    11821 tcaccatccg taagagttgc gccacacctg cgcgtgtcgg tacaaaatag gaagagataa
    11881 tatcgatgcg ttcactgggt gagcccatga tatcgaacag gcgctgcggt aacagtgaat
    11941 gccgttttgc cttgccctcc cctttcgccg gatcatcact taataaacgt gtcttcgccc
    12001 agataagcgg caatgttcca tcaaccagat gatttataaa tggactggat tccattttgc
    12061 gtaaataacg atgcgtcatg gcatcgttat gccaggaggc gggtaactcg atgcgatccg
    12121 ccatttcacc ctccgggaca tccagcacct gctgtaaggg tgaaaccgat ttgcaatacc
    12181 agtagcgggc gaaatcatcg gcaacgtcct ctaccacggg tcctattgcc atgacatcta
    12241 aatccgaaaa aagtggctcc tcccctgctc caaaataggc atcaccaata tttcgtcctc
    12301 ccaccagggt caccacgcca tcgacagtga aacttttatt gtgcatacgg cgattaagac
    12361 gggaaaagtc ggtgatataa ccaagcggac gcagcaagcg aaacgagaaa ggattaaaaa
    12421 gccggacttc aatgcgtgga tgactgtcaa gcaagcgtaa aatgtcgtca agtccgggcg
    12481 tattgttgtc gtccagcaac aaacggacgc gaacgccacg ctttgctgcg gctaacaggg
    12541 cggaaaacag taaccgaccc gacatatcgt cctgccagat gtaatactga acatccagcg
    12601 tatgctctgc catttcggcc agacgatacc gggcggcaaa cgcatccaga cttttctcca
    12661 gagggaaaag accacactga ccgggatgtt gcgaacacag tggcagcacc gcgctcgcca
    12721 gccggggcaa atcattcatc tccttgttgg gtaaggagtc tttcgtagag gtgggcgttt
    12781 tcttcatcat aacagacaaa gtatacctgt tcgggtaaag cgtgacgggt aataaattct
    12841 gaaacggttt taactgcgat ttcagccgct gccgcacgag ggtaaccata aaccccagta
    12901 ctgattgcag gaaaagccac tgacgtatag ctgtttgccg ccaccagtcg caggctattc
    12961 agataggcat cctgcaaaag ctggtcttcg ttttgttcac caccacgcca gactggcccg
    13021 acggtgtgta ctacggcttt agcgggaaga tcgcctgcaa gcgtaataac ggcatgcccc
    13081 gtagggcaat cgccctgctg ttgcctgact tttaaacagg catccagcag ggccggaccc
    13141 gctgcgcgat gaatggcccc atcgacgccg ccgcctccca ttaatgacgg attagccgca
    13201 ttcacaatca catcaacggc cagtttggta atatcaccct gcacaacatg aatacgcgtt
    13261 ttcataacgc ctccttacac cttcttgttt cttaagtgta cagcaggctt tttggttaaa
    13321 tcgcattttt ctgctcagca acgtgcgttg ttcagaaact tagttatatt cgatgttcat
    13381 tacagccagc tttttctgtt tatcaagata ctgcactttt actgaggcta tttgcgcgtt
    13441 tttaacatta ccgctcatta acgctttgct ggaataggtt ttgcccggaa cagaaccatt
    13501 ctgtgggcag ttcatttcta cgggtgatga ctgggtgctg acgtcacatg ccggttccac
    13561 aatttggcca taaaaatgga tcaccccccc ttgcgcggtg cttcctgcga tggcaataaa
    13621 aggaaaaaac aaactgccga gcataagaga gtttaaaaaa ggtctgaaca tttattctat
    13681 ttcctcaatg attagtcatc cttgagggtt gtgttatcca tactttcagg ttggctgatt
    13741 cgcagcagac cattctctcc agattcatct tatgctcgat atttcaacaa attaagattt
    13801 ttctgaagag ggcggccatt gttgtgataa atgaagtgac tgtccatcag aaacagtaac
    13861 aactattttc acccgatcgt ccggggaaat atttaaactc aacttcgtca aagcaatggg
    13921 ttgattagca ggcaatgaaa gggtcttttc ttgcttcgtc tgactttgcc ctgaactgcc
    13981 ttcgcgcagg gacaatattt gtactctgca cagacaagat tgagtaagag tgacttcagg
    14041 aataatggta tacacatccc cttgctgggt cgtattaaag gttatctggc tggaaagtgc
    14101 cgcaaggagt aataacgcat tcatattctt ctcccgaaaa aaaacagggc ttgcgccctg
    14161 tttctgtaat acaaatgatg tattagtact gatgagcggt cgcgttgtta ccaaagccaa
    14221 cctgagtcac gttgacggag gagttagatg cagtctggtc aactgcagca ccgttgccac
    14281 caccgaactg tttaaccgtc atttcagaat ttttgccgtt ccactgatca agagtagcgc
    14341 tgttaccgaa gccacgttgg gtcagatcga ttgagctgtc atccgagccc tgaccaacat
    14401 ctgcaccatt accgccgcca tgctgggtaa tagtcaagtc agagttacgg gcatcagttt
    14461 gcagagcaag tgcagagtta ccgccaccgt actggtaaat gttcagctct gaatttgggc
    14521 cgctattatt accgccacca ccgtggttac cgccgccgcc gtactgagga acaacacctg
    14581 ccagagcgct accggagaat acgattgctg caattgctgc tacttttaaa agtttcatgt
    14641 aaaaccccca tcggattgat ttaaaagtcg aatggaaatt aacgttgtgt cacgcgaata
    14701 gccatttgcg actgtctctg cactacaatt gccgtttttt gagtaccata ctgtgtaata
    14761 tttgctttat taccagaacc tttctggata atcatcgcag tattaccata agcaccttgc
    14821 gaaatactgg catcgttggc actgcccgcc tgatcaatat atgcaaggtt ataatctcct
    14881 gtctggtcaa tctttgcccg attgctacta ccttcttgcg caacaaccgc caaaagtttt
    14941 gagcctccct gccgtaactg agcactatta ttcgtcccag cttgaccaat tatggctgcc
    15001 tgattaaatg aagacttact caattcattt accgcgaagt tatattctga attagctaaa
    15061 tcataacctg ctgcggctgc aatcccaggc gcacccagta ttgttaacat cataaataac
    15121 aatttgtttt tcatgttgtc accctggacc tggtcgtaca tttaagaaat taaatcattt
    15181 caacttggtt gttaacgcaa cctgtatttt gttaacgctg cgttacgatg gaaagtatg
//
LOCUS       DAPGWB010000106        15039 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.107, whole genome shotgun sequence.
ACCESSION   DAPGWB010000106 DAPGWB010000000
VERSION     DAPGWB010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15039
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.107"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(73..2352)
                     /gene="maeB"
                     /locus_tag="RHX79_003171"
     CDS             complement(73..2352)
                     /gene="maeB"
                     /locus_tag="RHX79_003171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxaloacetate-decarboxylating
                     malate dehydrogenase"
                     /protein_id="HDV2198315.1"
                     /translation="MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
                     APCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
                     GIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFH
                     DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVV
                     CDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKK
                     MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
                     GATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI
                     APAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEG
                     EEARVLHATQELVTLGLAKPILIGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFK
                     EYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSV
                     VKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFG
                     IEPRVALLSHSNFGSSDCPSSSKMRQALELVRDRAPDLMIDGEMHGDAALVEAIRNDR
                     MPDSPLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASV
                     RRIVNMVALAVVEAQTQPL"
     gene            2641..3591
                     /gene="tal"
                     /locus_tag="RHX79_003172"
     CDS             2641..3591
                     /gene="tal"
                     /locus_tag="RHX79_003172"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDV2198316.1"
                     /translation="MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL
                     SQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSF
                     DKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSF
                     AQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYE
                     TIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMS
                     EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL"
     gene            3611..5614
                     /gene="tkt"
                     /locus_tag="RHX79_003173"
     CDS             3611..5614
                     /gene="tkt"
                     /locus_tag="RHX79_003173"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDV2198317.1"
                     /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
                     KHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
                     GYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG
                     ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGH
                     DPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKL
                     GWHHPPFEIPKKIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPK
                     DWEKTTQKYINELQANPAKIATRKASQNTLNAYGPMLPELLGGSADLAPSNLTIWKGS
                     VSLKEDPAGNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALM
                     KARQIMVYTHDSIGLGEDGPTHQAVEQLASLRLTPNFSTWRPCDQVEAAVGWKLAVER
                     HNGPTALILSRQNLAQVERTPDQVKEIARGGYVLKDSGGKPDIILIATGSEMEITLQA
                     AEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNVAARVAVEAGIADYWYKYIGL
                     KGAIVGMTGYGESAPADKLFPFFGFTAENIVAKAHKVLGVKGA"
     gene            complement(5710..6753)
                     /locus_tag="RHX79_003174"
     CDS             complement(5710..6753)
                     /locus_tag="RHX79_003174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1176 domain-containing protein"
                     /protein_id="HDV2198318.1"
                     /translation="MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVAR
                     NTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPDASEGEIAPRLLLDGEPLALSGDK
                     WRISPWLLVTDDTATITAFLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG
                     SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSL
                     DPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQ
                     ETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNW
                     HGPDAWPTLWITR"
     gene            complement(6879..7454)
                     /gene="nudK"
                     /locus_tag="RHX79_003175"
     CDS             complement(6879..7454)
                     /gene="nudK"
                     /locus_tag="RHX79_003175"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose pyrophosphatase NudK"
                     /protein_id="HDV2198319.1"
                     /translation="MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDR
                     GNGATILLYNAKKKTVVLIRQFRVATWVNGNESGQLIETCAGLLDNDEPEVCIRKEAI
                     EETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPF
                     SQALEMIKTGEIRDGKTVLLLNYLQTSHLMD"
     gene            complement(7522..9501)
                     /gene="aegA"
                     /locus_tag="RHX79_003176"
     CDS             complement(7522..9501)
                     /gene="aegA"
                     /locus_tag="RHX79_003176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent uric acid utilization protein
                     AegA"
                     /protein_id="HDV2198320.1"
                     /translation="MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITV
                     IKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTM
                     QIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDVALSGMAKSRRLR
                     TARQEHQPWHASTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRAD
                     QAQREASRCLKCGEHSVCEWTCPLHNHIPQWIELVKAGNIDAAVELSHQTNTLPEITG
                     RVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDLSHVTKVDKRVAIIG
                     AGPAGLACADVLTRNGVAVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGI
                     HFELNCEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTK
                     QVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPG
                     SKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPIEG
                     SEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGG
                     DAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH"
     gene            9707..11407
                     /gene="narQ"
                     /locus_tag="RHX79_003177"
     CDS             9707..11407
                     /gene="narQ"
                     /locus_tag="RHX79_003177"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HDV2198321.1"
                     /translation="MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAIN
                     IAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHL
                     NANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIG
                     IFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTSLPNELGLLAKTFNQM
                     SSELHKLYLSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRD
                     NEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLN
                     SVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIP
                     EDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAK
                     LTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRD
                     NGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM
                     "
     gene            11571..14684
                     /gene="acrD"
                     /locus_tag="RHX79_003178"
     CDS             11571..14684
                     /gene="acrD"
                     /locus_tag="RHX79_003178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease AcrD"
                     /protein_id="HDV2198322.1"
                     /translation="MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVR
                     VTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDE
                     AVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS
                     NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQ
                     LGGTPSVDKQALNATINAQSLLQTPEQFRDITLKVNQDGSEVRLGDVATVEMGAEKYD
                     YLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHGLEYKVAYETTSFVK
                     ASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNT
                     LTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLS
                     AVFVPMAFFGGTTGAIYRQFSITIVAAMVLSVLVAMILTPALCATLLKPLKKGEHHGQ
                     KGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLPTSFLPLE
                     DRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTHEKDNIMSVFATVGSGPGGNGQNVA
                     RMFIRLKDWSERDSKTGTSFAIIERATKAFNKIKEARVIASSPPAISGLGSSAGFDME
                     LQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLDDSPQLQIDIDQRKAQALGVA
                     IDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVP
                     FSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLE
                     WTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLAT
                     WMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHACRQRLRPI
                     LMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRF
                     PLKPRPE"
     gene            complement(14783..14842)
                     /gene="ypfM"
                     /locus_tag="RHX79_003179"
     CDS             complement(14783..14842)
                     /gene="ypfM"
                     /locus_tag="RHX79_003179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YpfM"
                     /protein_id="HDV2198323.1"
                     /translation="MIERELGNWKDFIEVMLRK"
BASE COUNT         3537 a         3986 c         3919 g         3597 t
ORIGIN      
        1 agctttacta atatattgca gccaaaccgc ttaccctgaa tattcagggt aagcgtgaga
       61 gttaaaaaag aattacagcg gttgggtttg cgcttcaacc acggccagcg ccaccatgtt
      121 gacgatacga cgcaccgatg cgatcggcgt taacacgtga accggtttcg ccacgcccat
      181 cagcaccgga ccgacagtca caccttccga gctggaaacg cgcagtaagt tgtaactaat
      241 gcgggcagct tccatgttcg gcatcaccag aatattggca gaacctttca aagggctgtc
      301 cggcatacgg tcgttgcgaa tcgcttccac cagcgctgca tcgccgtgca tttcaccatc
      361 aatcatcaga tctggcgcac gatccctgac cagttccagc gcctgacgca ttttgctcga
      421 cgacgggcag tcagaagaac caaagttgga gtgcgacaac agagcaacgc gcggctcaat
      481 accaaaacga cggacagttt ctgccgccat caaggtgatc tccgccagct cttctgcgtc
      541 tggttcgtca ttgacgtagg tatcggcaat aaaggtgtta ccactcggca gcagcagcgc
      601 gttcattgca cctgcggtgt gaacgccatc gcgataacca aagacatttt tcaccacgct
      661 aaaatgttca tgataatcgc ccaccgtacc gcagatcatt gcatcggctt ccccacgctg
      721 aaccatgatc gcgccgatca ctgtcgggtt actgatcagc gcccgctgcg cctgttcctg
      781 agtgacaccg cgacgcttca tgatctggaa gtattcggtc cagtactctt taaagcgcgg
      841 atcggattcg ttattgacga tctcaaaatc aacgcccgct ttgatctgca agcccagttt
      901 ctgaatgcgc atttcgatca cgttcggacg accgataagg atcggtttcg ccagtcccag
      961 cgttaccagt tcctgagtgg catgcagaac gcgcgcctct tccccttctg gcagaacaac
     1021 gcgcttcggc gctttgcgag cctgggagaa aatcggcttc ataaacaggt tggttttgta
     1081 aacgaactca gtcagcttgt cgatgtagac gtcgaaatca gcaatcggac gcgtcgccac
     1141 gcccgactcc atcgcggctt tagcgaccgc aggagcgatc ttaacgatca agcgcggatc
     1201 aaacggtttt ggaatgatgt attccggacc aaagctcaga tcctgatcgc catacgctga
     1261 agccaccact tcgctctgtt cggcgtgggc cagttccgca atcgcgcgta ccgccgccag
     1321 tttcatctct tcattgatag ccgttgcgcc aacatccagc gcgccacgga agataaacgg
     1381 gaagcaaagg acgttgttga cctggtttgg atagtcagaa cgaccggtgc aaatgatggc
     1441 atccggacgc acttctttcg ccagcggcgg cagaatttcc ggttccgggt tcgccagcgc
     1501 caggatcatt ggcgcacgag ccattttctt caccatttcc tgggtcagca ctttcgggcc
     1561 ggaacatcca aggaaaatat ccgcgccttc aatcacatca tcgagggtac gtttgccgtc
     1621 atccaccacc gcatatgcgg ctttggtttc cgccatgttt ggctcacggc cctgatagat
     1681 aacgcctttt gaatcgcaaa ccacgatgtt atgtttttgc agacccagcg ctaccagcag
     1741 gttcatacag gcgattgctg cggcacccgc gccggaaacc accatccgca cgtcggagat
     1801 gtttttctcc accacgcgca agccgttgag gatggcggca gtgctgatga ttgccgtgcc
     1861 gtgctgatcg tcgtggaata ccggaatatt catccgctcg cgcagtttct gttcaatata
     1921 gaaacattct ggcgctttaa tgtcttcgag gttgattccg ccgaaggtcg gttcgagcgc
     1981 agcgacaact tcaataaatt tgtccgggtc gagttcatca acttcaatgt caaatacatc
     2041 aatcccggcg aatttcttaa acagaacgcc cttgccttcc atcaccggtt tgccagccag
     2101 cgcgccaatg ttgcctaacc ccagcaccgc cgtaccgtta gagatcaccg ccaccaggtt
     2161 accgcgcgcg gtatatttgt aggcttttaa cgggtctttt tcgatttcaa gacaaggtgc
     2221 ggcaacgcct ggtgagtagg ccagcgccag atcgcgctgc gttgccagag gcttggttgg
     2281 agaaacctgg attttccctg gaactggaaa ttcatggaaa tcaagtgcac tttgttttaa
     2341 ctggtcatcc atttggttgt tcctttcacg taacgttcac aaataaagtg tgtgggcaac
     2401 agcccctgcc cacaacgtgg cgcacattat taccctgccg gagtctacag actttgagca
     2461 agtccaaact ctcaccatta atataatgtt ttggtaataa tcctataaca ctgatgttac
     2521 ctgcttaatc cagcaatacc atgcctgtct gctatgcttt tttgatgcgt ttagcgaaat
     2581 ttctcagaag tgtgaattaa cgcactcatc taacacttta cttttcaagg agtatttcct
     2641 atgaacgagt tagacggcat caaacagttc accactgtcg tggcagacag cggcgatatt
     2701 gagtccattc gccattatca tccccaggat gccaccacca atccttcgct gttactcaaa
     2761 gctgccggat tatcacaata tgagcattta atagacgatg ctatcgcctg gggtaaaaaa
     2821 aatggcaaga cccaggaaca acaggtggtc gcagcgtgtg acaaactggc agtcaatttc
     2881 ggtgctgaaa ttctcaaaat cgtacccggt cgcgtgtcaa cagaagttga tgcacgcctc
     2941 tcttttgata aagaaaagag tattgagaag gcgcgccatc tggtggactt gtatcagcaa
     3001 caaggcgttg agaaatcacg cattttgatc aaactggctt cgacctggga aggaattcgc
     3061 gcggccgaag agctggaaaa agaaggtatt aactgcaacc tgacgctgct gttttctttt
     3121 gcccaggcgc gggcctgtgc agaagcgggc gtttttctga tttcgccgtt tgtcgggcgt
     3181 atttatgact ggtatcaggc acgcaagccg atggacccgt atgtggtgga agaagatccg
     3241 ggcgttaaat cggtgcgcaa tatctacgac tactataagc aacaccacta tgaaaccatt
     3301 gtgatgggcg cgagcttccg tcgcaccgaa caaatcctcg ccttaaccgg ctgcgatcga
     3361 ctgactatcg caccgaattt gctgaaggag ctgcaggaaa aagtttcgcc agtggtacgt
     3421 aaattaatcc cgccttctca gacgttccca cgcccagcac ccatgagcga agcggagttc
     3481 cgttgggagc acaatcagga tgcgatggcg gtagaaaaac tgtctgaagg cattcgtcta
     3541 ttcgccgttg atcaacgcaa actggaagat cttcttgccg ccaaactata aaccagccac
     3601 ggagtgttat atgtcccgaa aagaccttgc caatgcgatt cgcgcactca gtatggatgc
     3661 ggtacaaaaa gccaattctg gtcatcccgg cgcgccgatg ggcatggctg atattgccga
     3721 agtgctgtgg aacgattttc ttaaacataa tcctaccgac ccaacctggt atgatcgcga
     3781 ccgctttatt ctttccaacg gtcacgcgtc gatgctgctc tacagtttgc tacatctgac
     3841 cggttacgac ctgccgctgg aagaactgaa gaacttccgt cagttgcatt cgaaaacccc
     3901 aggccacccg gagattggct atacgccagg cgttgaaacc accaccggcc cgcttggaca
     3961 aggtttggcg aacgccgtcg ggctggcgat agcggaacgt acactggcgg cgcagtttaa
     4021 ccagccagac catgagatcg tcgatcactt cacctatgtg tttatgggcg acggctgcct
     4081 gatggaaggt atttcccacg aagtctgttc gctggcaggc acgctgggac tgggcaagct
     4141 gattggtttt tacgatcaca acggtatttc catcgacggt gaaacagaag gctggtttac
     4201 cgacgatacg gcaaaacgtt ttgaagccta tcactggcat gtgatccatg aaatcgacgg
     4261 tcacgatccg caggcggtga aggaagcgat ccttgaagcg caaagcgtga aagataagcc
     4321 gtcgctgatt atctgccgta cggtgattgg ctttggttcg ccgaataaag caggtaagga
     4381 agaggcgcac ggcgcaccac tgggggaaga agaagtggcg ctggcacggc aaaaactggg
     4441 ctggcaccat ccgccatttg agatccctaa aaagatttat cacgcctggg atgcccgtga
     4501 aaaaggcgaa aaagcgcagc agagctggaa tgagaagttt gccgcctata aaaaggctca
     4561 tccgcaactg gcagaagagt ttacccgacg gatgagcggt ggtttaccga aggactggga
     4621 gaaaacgact cagaaatata tcaatgagtt acaggcaaat ccggcgaaaa tcgctacccg
     4681 taaggcttcg caaaatacgc ttaacgctta cgggccgatg ctgcctgagt tgctcggcgg
     4741 ttcggcggat ctggctccca gcaacctgac catctggaaa ggttctgttt cgctgaagga
     4801 agatccagcg ggcaactaca ttcactacgg ggtgcgtgaa tttggcatga ccgctatcgc
     4861 caacggcatc gcgcaccacg gcggctttgt gccgtatacc gcgacgttcc tgatgtttgt
     4921 tgaatacgcc cgtaacgccg cgcggatggc ggcactgatg aaagcgcggc agattatggt
     4981 ttatacccac gactcaattg gcctgggcga agatggtccg acgcaccagg ctgttgagca
     5041 actggccagc ctgcgcttaa cgccaaattt cagcacctgg cgaccgtgcg atcaggtgga
     5101 agcggcggtg ggctggaagc tggcggttga gcgccacaac ggaccgacgg cactgatcct
     5161 ctcaaggcag aatctggccc aggtggaacg tacgccggat caggttaaag agattgctcg
     5221 tggcggttat gtgctgaaag acagcggcgg taagccagat attattctga ttgccaccgg
     5281 ttcagagatg gaaattaccc tgcaagcggc agagaaatta gcaggagaag gtcgcaatgt
     5341 acgcgtagtt tccctgccct cgaccgatat tttcgacgcc caggatgagg aatatcggga
     5401 gtcggtgttg ccttctaacg ttgcggctcg cgtggcggtg gaagcaggta ttgccgatta
     5461 ctggtacaag tatattggtc tgaaaggggc aattgtcggg atgacgggtt acggggaatc
     5521 tgctccggcg gataagctgt tcccgttctt tggctttacc gccgagaata ttgtggcaaa
     5581 agcgcataag gtgctgggag tgaaaggtgc ctgatggtga tcgccggatg ctgattgccg
     5641 gatgcgacgc tgacgcgtct tatccggcct acagcgtctt atccggccta catgtccccg
     5701 caattttgtt taacgggtga tccacaacgt gggccaggcg tctggcccat gccagttatc
     5761 gcaggtgggt tctgcggcat aacgcaccag gcgaaaacgc tgaccgtcaa agcgccagcg
     5821 cgcctgaatg ccacaatcgc ttaatccgcg ccctttcgct aaggtcacca gttcacgcga
     5881 tttctcatca aatgttgcgt tcatcagttc cagttcattc gtctcctgac cgttgttgaa
     5941 cggcaaacgc aaccgaaccg ggcgcgaggc tagtggcttt ttacgcgaca caatccatgc
     6001 caaatcaatg gtgttatagg cccctgcctc acagctaatc atcatcagcg ctttatcatc
     6061 agtcagcgca gtgacattca cctcacgacg taacggatca agcgagcagc gcagaccatt
     6121 catccgccag tttccataat ccagcaaatc gttgcgttct tcgagtgaga gtggcgtcgg
     6181 cgttgggtta accaccgcga cctctttcag cgcaggcgcg ggcggtacgc tgagcggcgg
     6241 ttcgtcccct ttcttgatcc acgcggtttc actgccaacg cgcttttgct gagcatcaat
     6301 aaacaacaac gccgctttta agccactcag agaaatggtc tgattgccgt cgcgtaaggt
     6361 gatcgccttc ccttcctgaa tcatctgcaa aaacgcggtg atggttgccg tatcatcggt
     6421 tactaataac catggtgaaa tccgccactt gtcaccactt aacgccaacg gctcaccatc
     6481 taacagcagc cgtggcgcta tctctccttc agacgcatcc ggcgacttca acccgccgcg
     6541 ctcaatacgt aaaacggcat cggtatgcgc cccggcgctg cggctcaggg tcatcaccag
     6601 tccattatga tcgcccgtat tgcgcgccac gcagaagttt tggttattac aggtgacctg
     6661 ccagtcggaa aacgcccgtt gcgctggtgc cgcccacacc aaagacgtcg gcaacaaagc
     6721 gaaaaaaaag agaaggaaaa tgcgatagcg catggacggt acgaccccag aagttcaaac
     6781 aaacagcaca agtcgtatct tcgttgcgca ggtagcgcgg ctcaatcaga tttgtcggat
     6841 tgagccaata ataaacaacg aaatattatt gttatttttc agtccattaa atgtgacgtt
     6901 tgcaaatagt taagcaataa caccgtctta ccgtcacgta tctcgccggt tttgatcatc
     6961 tccagcgcct ggctgaacgg cagctcgagc acttcaatat cttcatcttc aacaccgcca
     7021 ccggcgttag cgcgctgatt gtcactgtat tcggcgataa aaaagtggat tagctcagtc
     7081 acaccgccag gcgacatata cagttcaaat aatttgcgca cttcgcccac ttcatagccc
     7141 gtctcttcaa tcgcttcttt acgaatgcac acttccggtt cgtcgttatc cagcagcccg
     7201 gcgcaggttt caatcagctg cccgctttca ttgccattaa cccaggtagc gacacggaac
     7261 tgacgaatca gaaccacggt ctttttcttc gcgttgtaca ggaggatcgt cgcaccatta
     7321 ccgcgatcgt aaacttcacg tttatggcgg ataacttcgc catctttgcg cgtgagatcg
     7381 taagtaatgt tgtgcagggt gaaatagtta tcggagagaa ttttgtcttt aatgagggtg
     7441 atttgttgcg tcatagcgac tccacagcgc gaaatgaaca attatcttac gctgtgaagt
     7501 cgggtttgtc tgcgcaggct atcagtgaga tttgactgat tttaccccca gccagtcaat
     7561 aatgccctgt gccgcatgac gtccttctgc cattgcggta accaccagat ccgcaccacg
     7621 cacggcgtcg ccaccggcga agattttcgg attggtggtc tggtaacggt actggctttc
     7681 cacatccgcg atgatgcggc cccatttgtc taccgttaca ccgtgcgact ccagccacgg
     7741 catcccgtgt ggattgaagc caaacgccat aatcaccgca tcggctggca tgacaaattc
     7801 actgccctca atcggtacag gtcgccgacg cccctgggca tccggctcgc caagacgcgt
     7861 gcgcaggaaa cgaattccgc aaacgtgacc ttgttcattc agctcaagcg ccaccggctg
     7921 gacgttaaat tcgaagttgg ccccctcttc gcgggcgttc ttcacctctt tcttcgagcc
     7981 tggcatgtta gcttcatcac gacgataagc gcaggtgacg ttactcgcgc cgtggcgcag
     8041 cgcagtacgc acacagtcca tcgcggtgtc gccgccgccc agtaccacga cgttaagtcc
     8101 ggcggtattg ataaacggct cttccggtag ctcttcgagc cccatcacct gtttagtgtt
     8161 ggcaatgagg aacggcagcg cgtcataaac gcccggcgca tcttcattgg gtaaacccgc
     8221 tttcatggaa cggtaagtgc ctacgccaac gaagaccgcg tcgtattgtt ccaaaagcga
     8281 atccaaagag acatctttac ccacttcaca attgagttcg aagtgaatcc ccatcgcgct
     8341 gaagatttcc cggcggcgtg ccagcaggga tttatccagt ttgaaagaag gaatgccgaa
     8401 agtgagcaag ccaccaattt ctggatggcg atcgtacacc gtcaccgcca cgccattgcg
     8461 ggtcagaaca tccgcacagg ccagccctgc cggacctgcc ccgataatcg ccacccgctt
     8521 gtccactttg gtgacatgac ttaagtcagg acgccaacct ttcgccaacg cctgatctga
     8581 aatatagcgt tcaatgttgc cgatagttac cgcgccgtgc tcatcgcgaa tagtacaggc
     8641 accttcacac aaacggtctt gcggacaaac gcgtccggta atttccggca gggtgttggt
     8701 ctggtgagaa agctcgacgg cggcgtcgat gtttccggct ttcaccagtt caatccactg
     8761 cggaatatgg ttatgcagcg ggcaggtcca ttcacaaacg ctgtgctcgc cgcacttaag
     8821 gcagcgcgag gcttcccgtt gtgcctggtc ggcgcgaaat ggcagataaa tttcatcaaa
     8881 accggttttg cgcgcttcaa tcgccagttt atccggctcg ccacgcgcgg gcgttgcctg
     8941 catttgttcg actttactca ttaccggcat ttcttgcgcc gcggtactgg catgccacgg
     9001 ttgatgttcc tgacgcgcgg tgcgcaagcg gcgggatttc gccatgccgg agagtgcgac
     9061 gtcagtgacc agttgcagcg cgtccgccgg gcaattctca acacaggcag gaccgttttc
     9121 gcgccccgca caaaggtcgc atttatgcgc cgtggctttt acttttcctg ccgcgacggg
     9181 tgtcaggacg atttgcatcg taccaaaagg acaggccacc acgcaggatt tacagccaat
     9241 acacttttgc tgattgacct gaatgctgtc atcaacgtgg ctgattgcgc cattagggca
     9301 gctacgggcg cagggcgcat cttcacaatg gtgacaggtc actgcactac gttgctgttg
     9361 atgtttgata accgtaattc ggggatgaaa atggtgttgg ctcaggacat gttgctcatc
     9421 attgtgagcc atgacacagg cgatttcaca agcatgacaa cccagacatt gctgactgtt
     9481 ggccataata aaacgattca taacgacctt cttttttggt tgtaaaaacc ttattcttta
     9541 tatgagtgtt gttattaccc gacttacagg ggaatcggca atgttcatgt gcccagaata
     9601 agtaactatt tcgctataaa ctgtggcaga tcaaataatc ccatcactga ctaaattgtg
     9661 tttcagctaa ctggaacatt aatgattttt tgtggagaag acgcgtgtga ttgttaaacg
     9721 acccgtctcg gccagtctgg cccgggcctt tttttacatt gtgctgctgt cgattctttc
     9781 cacgggtatc gctctgctaa ctctggcgag cagtttgcgc gacgctgagg ctatcaatat
     9841 tgccggatcg ctacgtatgc agagttaccg cctgggctac gacttgcaaa gtggcagtcc
     9901 acaactcaat gcacatcgcc agttgtttca gcaggcactg cattcaccgg tattaaccaa
     9961 tctcaacgtc tggtatgtgc cagaagcagt aaaaactcgc tatgcgcatc tgaatgccaa
    10021 ctggctggag atgaataatc ggctcagcaa gggcgatttg ccgtggtatc aggccaatat
    10081 taataattat gttaatcaga tagacctgtt cgtgctggct ttacagcact acgctgaacg
    10141 caaaatgctg ctggtggtgg cgatttccct ggctggcggt atcggtattt tcacgctggt
    10201 cttttttact ttgcgccgta tacgccatca ggtggttgcc ccgctgaatc agctggttac
    10261 cgccagtcaa cgtattgaac acgggcagtt cgactcgccg ccgctggata ccagtctgcc
    10321 gaatgagctt ggtctgcttg caaaaacctt taaccagatg tcgagcgagc tgcataaatt
    10381 gtacctttcg ctggaggcgt cagtagaaga aaagacccgc gatctccacg aggccaagcg
    10441 tcgtctggag gtgttgtatc aatgttccca ggcgctgaac accagccaga ttgatgtgca
    10501 ttgtttccgc catattttgc agattgttcg cgataatgaa gcggctgaat atctggagtt
    10561 aaatgtcggt gaaaactggc ggattagcga agggcaacca aacccggaat tgccgatgca
    10621 gattttaccg gtgacaatgc aagagacggt ttacggcgaa ctgcactggc aaaatagtca
    10681 cgtttcatca tcagaaccgc tgcttaacag cgtttcgtcg atgctgggac gcggtttgta
    10741 ctttaatcag gcgcagaagc attttcagca gttattgttg atggaagaac gtgcaaccat
    10801 cgcccgcgaa ttgcacgact cgctggctca ggtactttct tacttacgta tccagttgac
    10861 gttactgaag cgttcgatac cggaagataa cgccaccgca caaagtatca tggccgattt
    10921 ttcccaggcg ttgaatgatg cttatcggca gttacgcgag ctgttgacta ctttccgcct
    10981 gacgctgcag caggcggatc tcccctccgc gttgagggaa atgctggata cgttacaaaa
    11041 tcaaaccagc gccaaactga ccctcgactg ccgtctgcca accctggcgc tggatgcgca
    11101 aatgcaggtg catttgttgc aaattattcg cgaagcggtg ctgaatgcga tgaagcacgc
    11161 caacgccagc gaaatcgccg tcagttgcgt caccgcgccg gacggcaatc acacggttta
    11221 tatccgtgat aacgggattg gtatcggtga accgaaagaa cccgaaggtc attatggtct
    11281 gaatatcatg cgcgaacgcg cggaacggct gggtgggacg ctgacttttt cacaaccttc
    11341 cggcggcggc acgttagtga gtattagctt tcgctccgcg gagggtgagg aaagtcagct
    11401 gatgtaatgc ctcctactga ccaaagaata cttgcactta aggttcagta taaaagggca
    11461 tgataattta cattaactcc tttttttctc cacgattggc tcgtaccttg ccgctacagt
    11521 gaagcaagtc aagcctacaa cgatacgcag aaacacgagg tcctctttta atggcgaatt
    11581 tctttattga tcgccccatt tttgcctggg tgctggcaat cctgttgtgt ctgacaggga
    11641 ccctggcgat tttttcattg cccgttgaac aataccccga tctcgcgcca ccgaatgtgc
    11701 gagtgaccgc taactatccc ggcgcatcgg cccagacgct ggaaaacacc gtgacccagg
    11761 ttatcgagca aaatatgacc ggcctcgata atctcatgta tatgtcatct cagagcagtg
    11821 gcaccggtca ggcatctgtc actttaagtt ttaaagcagg caccgatccg gacgaagccg
    11881 tgcagcaagt acaaaaccag ctgcaatcag ccatgcgaaa gttaccgcag gcggtgcaaa
    11941 atcagggcgt gacggtgcgt aaaaccggcg ataccaatat tctgaccatt gctttcgtct
    12001 ctaccgatgg ttcgatggat aaacaggata ttgccgatta tgttgccagt aatattcagg
    12061 acccgttaag ccgcgtgaat ggcgtcgggg atatcgatgc ctatggttcg caatattcca
    12121 tgcgtatctg gctggacccg gcgaaactca acagtttcca gatgacggct aaagatgtca
    12181 ctgatgccat tgagtcacag aacgcgcaga ttgcggttgg gcaacttggt ggtacacctt
    12241 ccgtcgataa gcaggcgctc aacgccacca ttaacgccca gtcactgctg caaacaccag
    12301 aacagttccg cgatatcacc ttgaaggtga atcaagacgg ctcagaggta aggctgggcg
    12361 atgtcgccac cgtcgaaatg ggggcggaga aatacgatta tcttagccgc ttcaatggta
    12421 agccagcctc cgggctgggg gtaaaactgg cctccggcgc aaacgaaatg gcgacagcgg
    12481 agctggtgct caatcgtctc gacgagctgg cgcagtattt cccgcacgga ctggaataca
    12541 aggtggcgta tgaaaccacc tcgtttgtta aagcctccat tgaagacgtg gtgaaaacgc
    12601 tgctggaagc tatcgctctg gttttcctcg ttatgtatct gttcctgcaa aacttccgcg
    12661 ccacgctgat acccactatc gccgtgccgg tggtgttgat gggaaccttc tccgtacttt
    12721 acgccttcgg ttacagcgtc aacaccttaa ccatgttcgc gatggtgctg gcgatcggtc
    12781 tgctggtgga tgacgcaatc gtggtggtgg aaaacgtcga acgtattatg agtgaggaag
    12841 gactcactcc tcgcgaagcc acacgtaaat cgatggggca gatccagggg gcactggtcg
    12901 ggattgcgat ggttctttcg gcggtatttg taccaatggc cttcttcggc ggcaccaccg
    12961 gtgccatcta tcgccagttc tctattacca ttgttgcggc gatggtgctg tcagtactgg
    13021 tagcgatgat ccttactccg gctctgtgtg ccacactact taagccactg aaaaaaggtg
    13081 agcatcacgg gcaaaaaggc ttttttgcct ggtttaacca gatgtttaac cgcaacgccg
    13141 aacgctacga aaaaggggtg gcgaaaattc tccaccgtag cctgcgctgg attgtgattt
    13201 atgtcctgct gcttggcggc atggtgttcc tgttcctgcg tttgccgacg tcgttcttac
    13261 cgctggaaga ccgtggcatg tttactacct cggtacaatt gcccagcggt tcaacccaac
    13321 aacagaccct gaaagtcgtt gagcaaatcg agaaatatta cttcacccat gaaaaagaca
    13381 acatcatgtc ggtgtttgcc actgttggtt ctggccccgg gggtaacggg caaaacgtgg
    13441 cgcgaatgtt tatccgcctg aaagactgga gcgaacgcga cagtaagacc ggcacctcat
    13501 ttgccattat cgagcgtgca acgaaggcgt ttaacaagat taaagaagct cgcgttatcg
    13561 ccagcagccc gccagcaatt agcggtcttg gtagttctgc aggttttgat atggagttgc
    13621 aggaccacgc tggagcaggt cacgatgcgc tgatggcagc acgtaaccag ttgctggcgc
    13681 tggcggcgga aaacccggag ctaacccgtg tgcgccataa cggcctcgat gacagtccgc
    13741 agttgcagat tgatatcgac cagcgtaaag ctcaggcgct gggcgttgct atcgacgata
    13801 ttaacgacac actgcaaacc gcctggggtt cgagctatgt gaatgacttt atggatcgcg
    13861 gtcgcgtgaa gaaagtctat gtgcaggcag ctgcgccgta tcgcatgctg ccagatgaca
    13921 ttaatctctg gtatgtccga aataaagatg gcggcatggt gcccttctct gctttcgcga
    13981 cctcacgctg ggagacaggc tcgccgcgtc tggaacgcta taacggttat tctgcggttg
    14041 agattgttgg ggaagccgca ccgggggtca gtaccggtac ggcgatggat attatggaat
    14101 cgttagtgaa gcagttgcca aacggctttg gtctggagtg gacggcgatg tcgtatcagg
    14161 agcggctttc cggcgcgcag gctccggcgc tgtacgccat ttccttgctg gtagtattcc
    14221 tgtgtctggc ggcattgtat gaaagctggt cggtaccgtt ctcggtaatg ctggtcgtgc
    14281 cgctgggggt tatcggcgcg ctgctggcaa cctggatgcg cgggctggaa aacgacgttt
    14341 acttccaggt gggcctgtta acggtcattg gtttatcggc gaaaaacgcc atcctgatcg
    14401 tcgagtttgc taacgagatg aaccaaaaag gccacgacct gtttgaagcg acgctccacg
    14461 cctgccgtca gcgtttacgc ccgattctga tgacctcgct ggcatttatc ttcggcgtat
    14521 tgccaatggc aaccagcacg ggtgccggtt ccggtggtca gcatgcggtg ggtactggcg
    14581 taatgggcgg gatgatttcg gccactattc tggctattta cttcgtgccg ctgttctttg
    14641 tgctggtgcg ccgccgcttc ccgctgaagc cgcgcccgga ataagcaata aaaaaggcga
    14701 catgccaatg tgtcgccttt ttcaactttc cgattaagaa cctgctcagc gggttcttgc
    14761 tgtttatact ttgtctcggg aattacttac gaagcataac ttcgataaag tctttccagt
    14821 tccccagttc acgttcaatc ataacaacct ctcttataat tatgggtatt ctacggaaac
    14881 aatataccgt ggtgaagcta atttactcga ttgctgcgat gactacctcc gggggacaaa
    14941 ccttatgtaa atactatggt cctgcggtga taatttgtat gtgatacaca gcaacatttc
    15001 gagatattca tacggcatct aatactgatt taattctgg
//
LOCUS       DAPGWB010000107        15024 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.108, whole genome shotgun sequence.
ACCESSION   DAPGWB010000107 DAPGWB010000000
VERSION     DAPGWB010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 15024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15024
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.108"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            116..358
                     /locus_tag="RHX79_003180"
     CDS             116..358
                     /locus_tag="RHX79_003180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198324.1"
                     /translation="MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSA
                     TSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ"
     gene            472..1110
                     /locus_tag="RHX79_003181"
     CDS             472..1110
                     /locus_tag="RHX79_003181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbF family lipoprotein"
                     /protein_id="HDV2198325.1"
                     /translation="MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDI
                     QNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVIQHGRLVKTLLGGDNLI
                     EVNNLAADPLIKPAQIVDGATWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDET
                     PVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ"
     gene            1107..1844
                     /locus_tag="RHX79_003182"
     CDS             1107..1844
                     /locus_tag="RHX79_003182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HDV2198326.1"
                     /translation="MIKQTFVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLI
                     DLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAELAADSSADDAAAINALRQ
                     QIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGLPPSTVTLFGLISRPGKQP
                     FTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVG
                     LADSVWSETPDALNADILQTLTQRIPQ"
     gene            1844..3940
                     /locus_tag="RHX79_003183"
     CDS             1844..3940
                     /locus_tag="RHX79_003183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HDV2198327.1"
                     /translation="MKKRHLLSLLALGISTACYGETYPAPIGPSQSDFGGVGLLQTPT
                     ARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTY
                     KDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
                     LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRL
                     KLEYEGNNYQQDFAGKLEQKSKFNVGAIYRVTDWADVNLSYERGNSFMFGVTLRTNFN
                     DLRPSYIDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGE
                     QVKYRDSREGIIRANRIVMNDLPDGIKTIRVTENRLNMPQVTTETDVASLKNHLAGEP
                     LGHETKLAQKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMG
                     TADLWLTDHLLTTGSLFANLANNYDKFNYTNPPQDSHLPRVRTHVREYVQNDVYVNNL
                     QANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQRDWRSA
                     KDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVV
                     GGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGR
                     KFQLYDMTSDRSVNFR"
     gene            complement(3987..4265)
                     /locus_tag="RHX79_003184"
     CDS             complement(3987..4265)
                     /locus_tag="RHX79_003184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198328.1"
                     /translation="MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSN
                     VSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKPGVNCVPDGSTGH"
     gene            4480..4890
                     /gene="psiE"
                     /locus_tag="RHX79_003185"
     CDS             4480..4890
                     /gene="psiE"
                     /locus_tag="RHX79_003185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HDV2198329.1"
                     /translation="MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLAD
                     VLFAPEQTSKYELVEGLVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLII
                     VDHKSPLDVLIYSAAILLLVITLWLCNSKRLKRE"
     gene            complement(4934..6409)
                     /gene="xylE"
                     /locus_tag="RHX79_003186"
     CDS             complement(4934..6409)
                     /gene="xylE"
                     /locus_tag="RHX79_003186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose transporter XylE"
                     /protein_id="HDV2198330.1"
                     /translation="MNTQYNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVA
                     PQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGS
                     AWPELGFTSINPDNTVPIYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIR
                     GKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLY
                     TVPESPRWLMSRGKQEQAESILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVG
                     VILIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIM
                     TVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQASGIVALLSMLFYVAAFAMSWGPVCW
                     VLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGC
                     MGVLAALFMWKFVPETKGKTLEELEALWEPETKKTQQTAAL"
     gene            complement(6781..7671)
                     /gene="malG"
                     /locus_tag="RHX79_003187"
     CDS             complement(6781..7671)
                     /gene="malG"
                     /locus_tag="RHX79_003187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001252048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalG"
                     /protein_id="HDV2198331.1"
                     /translation="MAMVQPKSQKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNF
                     ATGSLIPEQISWDHWKLALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVAL
                     STTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHG
                     GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVV
                     FILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITI
                     VFLLAQRWLVNGLTAGGVKG"
     gene            complement(7686..9230)
                     /gene="malF"
                     /locus_tag="RHX79_003188"
     CDS             complement(7686..9230)
                     /gene="malF"
                     /locus_tag="RHX79_003188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalF"
                     /protein_id="HDV2198332.1"
                     /translation="MDVIKKKHWWQSDALKWSVLGLLGLLVGYLVVLMYAQGEYLFAI
                     TTLILSSAGLYIFANRKAYAWRYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTF
                     ERAQEVLLDRSWQAGKTYNFGLYPAGDEWQLALSDGETGKNYLSDAFKFGGEQKLQLK
                     ETTAQPEGERANLRVITQNRQALSDITAILPDGNKVMMSSLRQFSGTQPLYTLDGDGT
                     LTNNQSGVKYRPNNQIGFYQSITADGNWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKP
                     FLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISIL
                     IFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLL
                     KAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNG
                     GPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKA
                     TRMKFD"
     gene            complement(9384..10574)
                     /gene="malE"
                     /locus_tag="RHX79_003189"
     CDS             complement(9384..10574)
                     /gene="malE"
                     /locus_tag="RHX79_003189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000695396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter
                     substrate-binding protein MalE"
                     /protein_id="HDV2198333.1"
                     /translation="MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYN
                     GLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLL
                     AEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPA
                     LDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGL
                     TFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTF
                     KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYE
                     EELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQT
                     RITK"
     gene            10939..12054
                     /gene="malK"
                     /locus_tag="RHX79_003190"
     CDS             10939..12054
                     /gene="malK"
                     /locus_tag="RHX79_003190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011915502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter ATP-binding
                     protein MalK"
                     /protein_id="HDV2198334.1"
                     /translation="MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKST
                     LLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKL
                     AGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEP
                     LSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKP
                     LELYHYPADRFVAGFIGSPKMNFLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQ
                     VGANMSLGIRPEHLLPSDIADVILEGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDV
                     VLVEEGATFAIGLPPERCHLFREDGTACRRLHKEPGV"
     gene            12126..13466
                     /gene="lamB"
                     /locus_tag="RHX79_003191"
     CDS             12126..13466
                     /gene="lamB"
                     /locus_tag="RHX79_003191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltoporin LamB"
                     /protein_id="HDV2198335.1"
                     /translation="MMITLRKLPLAVAVAAGVMSAQAMAVDFHGYARSGIGWTGSGGE
                     QQCFQTTGAQSKYRLGNECETYAELKLGQEVWKEGDKSFYFDTNVAYSVAQQNDWEAT
                     DPAFREANVQGKNLIEWLPGSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGLENIDVG
                     FGKLSLAATRSSEAGGSSSFASNNIYDYTNETANDVFDVRLAQMEINPGGTLELGVDY
                     GRANLRDNYRLVDGASKDGWLFTAEHTQSVLKGFNKFVVQYATDSMTSQGKGLSQGSG
                     VAFDNEKFAYNINNNGHMLRILDHGAISMGDNWDMMYVGMYQDINWDNDNGTKWWTVG
                     IRPMYKWTPIMSTVMEIGYDNVESQRTGDKNNQYKITLAQQWQAGDSIWSRPAIRVFA
                     TYAKWDEKWGYDYNGDSKVNPNYGKAVPADFNGGSFGRGDSDEWTFGAQMEIWW"
     gene            13709..14629
                     /gene="malM"
                     /locus_tag="RHX79_003192"
     CDS             13709..14629
                     /gene="malM"
                     /locus_tag="RHX79_003192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose operon protein MalM"
                     /protein_id="HDV2198336.1"
                     /translation="MKMNKSLIALCLSAGLLASAPGISLADVNYVPQNTSDAPAIPSA
                     ALQQLTWTPVDQSKTQTTQLATGGQQLNVPGISGPVAAYSVPANIGELTLTLTSEVNK
                     QTSVFAPNVLILDQNMTPSAFFPSSYFTYQEPGVMSADRLEGVMRLTPALGQQKLYVL
                     VFTTEKDLQQTTQLLDPAKAYAKGVGNSIPDIPDPVARHTTDGLLKLKVKTNSSSSVL
                     VGPLFGSSAPAPVTVGNTAAPAVAAPAPAPVKKSEPMLNDTESYFNTAIKNAVAKGDV
                     DKALKLLDEAERLGSTSARSTFISSVKGKG"
BASE COUNT         3736 a         3843 c         3934 g         3511 t
ORIGIN      
        1 aaaaccccat ctctaattcc ccgcgccgta attcgcatgc tttagttgtg tatactcgat
       61 cccgcccgaa atgtttttgg gtaaatctcc attcattcaa tgaagggaaa ttgttatgaa
      121 aaaagttctg tatggcattt ttgccatatc tgcgcttgcg gcgacttctg cgtgggctgc
      181 acctgtacag gtgggcgaag cggcagggtc ggcagcaacg tcggtttcgg cgggtagttc
      241 ctccgcgacc agcgtcagca ccgtaagctc ggcggtgggt gtcgcgctcg cggcaaccgg
      301 tggcggtgat ggttctaata ccgggaccac aacaaccacg accaccagta cccagtaata
      361 aagtatgtat ccccaaaata attcgagtca tcgcatctgt ggcttgaagt atgaagggat
      421 ttaccataac cacactccgg tgtggttatt ctgcccctct ggagaagagt cgtgaagcga
      481 cctgcactca ttcttatctg cctgctatta caggcctgtt cagccacgac taaagagctg
      541 ggcaattcac tgtgggacag tctgttcggt acgccaggcg tacagctgac ggatgatgat
      601 attcaaaata tgccctacgc cagccagtat atgcagctta atggcgggcc gcaattgttt
      661 gtggtgctgg ccttcgctga agacggacaa caaaaatggg tcactcagga tcaagccact
      721 cttgtcatac aacatggtcg tctggtgaag actttgcttg gcggcgacaa cctgattgaa
      781 gtgaataacc ttgccgccga cccgctgatt aaacccgcac aaattgttga tggtgcaaca
      841 tggacgcgca cgatgggctg gaccgagtac cagcaggtac gctacgccac cgcacgctca
      901 gtcttcaaat gggatggcac cgataccgtc aaggtcggca gcgatgaaac cccggttcgc
      961 gtgctggacg aagaagtctc caccgaccag gcgcgctggc ataaccgcta ttggatcgac
     1021 agcgaagggc aaattcgcca gtcggaacag tatctcggcg cggattattt cccggtgaaa
     1081 accactctca tcaaggcggc aaaacaatga ttaaacaaac ttttgtcgcg ttgcttttga
     1141 gtgtgggagc gtcatcggtc ttcgcggcag gaaccgtcaa ggtgttcagc aatggcagca
     1201 gtgaggccaa aacactaaca ggcgcagagc atttaatcga tctggtaggc caaccgcggc
     1261 tggcaaacag ctggtggccc ggtgcggtga tcagcgaaga gctggcaacg gcggcagcat
     1321 tgcgacagca gcaggcgttg ctgacacggc tggcagaact ggccgcagac tccagcgctg
     1381 acgatgccgc tgcgattaac gccttacgcc agcaaattca ggcgttgaaa gtgacgggta
     1441 ggcaaaaaat caatcttgat cccgatatcg tccgcgttgc cgaacgcggt aacccaccgt
     1501 tgcagggcaa ctacacgctg tgggtcggac taccgccgtc cacggtcacg ttgttcgggc
     1561 ttatcagccg tcctggcaag cagccattca ctccaggtcg cgacgtggcg agctatctct
     1621 ctgaccagag cctgctcagc ggtgcggatc gcagctacgc gtgggtggtt tacccggacg
     1681 gacgcacgca aaaagcgccg gtggcttact ggaacaagcg tcacgtagag ccgatgcccg
     1741 gcagcattat ttatgttggc ctcgcggact ccgtctggag tgagacgcct gatgccctta
     1801 acgccgacat tcttcagact ctgacgcagc ggatacctca ataatgaaaa aaagacatct
     1861 gcttagctta ctggcgctgg gcattagcac agcttgctac ggcgaaacat atcctgcgcc
     1921 cattggtccg tcgcagtcgg atttcggtgg cgtaggatta ttacaaacgc ccaccgcgcg
     1981 tatggcacgg gaaggggagt tgagtctgaa ctatcgcgat aacgatcagt accgttatta
     2041 ctcagcttca gtgcaactct tcccgtggct ggaaacgacg ctgcgttaca ccgacgtgcg
     2101 cacccggcag tacagcagcg tcgaagcgtt ctctggtgat caaacgtata aagataaagc
     2161 cttcgatctc aaactgcgct tgtgggaaga gagttactgg ctaccgcaag tggcggttgg
     2221 tgcgcgggat atcggcggta cggggctgtt tgatgcggaa tatcttgttg ccagcaaagc
     2281 ctggggaccg ttcgatttta cgctcggcct gggctgggga tatctgggta ccagcggtaa
     2341 tgtgaaaaat ccgctctgtt cagccagtga taaatattgc tatcgcgata acagctacaa
     2401 gcaggcaggt tcgatcgacg gcagtcagat gttccacggc ccggcatcac tgtttggcgg
     2461 cgtggaatac cagacgccct ggcaaccgct gcgtctgaaa ctggagtatg aaggcaataa
     2521 ttatcagcag gattttgccg gtaagcttga gcaaaaaagt aagtttaacg tcggggcgat
     2581 ttatcgcgtt accgattggg ccgacgttaa ccttagctat gaacgtggca actcctttat
     2641 gtttggcgtc acgctgcgca ccaactttaa cgatctgcgc ccgtcctaca tcgataacgc
     2701 ccgcccgcaa tatcaaccgc agccgcagga tgccattttg cagcattcgg tggtggcgaa
     2761 tcagttaacg ctgttgaaat acaatgccgg acttgccgat ccgcagatcc aggcgaaagg
     2821 cgatacgctg tatgttaccg gcgagcaggt gaaatatcgt gattcgcgcg aagggatcat
     2881 ccgtgctaat cggatcgtga tgaatgatct gccggatggg atcaaaacga tccgcgttac
     2941 ggaaaatcgt cttaacatgc cgcaggtgac gacggaaacc gatgtcgcca gcctgaaaaa
     3001 tcatctcgcc ggagagccgt tgggccacga aacgaagctg gcgcaaaaac gcgtcgagcc
     3061 agtggttccg cagtccaccg agcagggctg gtatatcgac aaatcacgct ttgatttcca
     3121 catcgatccg gtgctgaacc agtcggtcgg tggcccggaa aacttttaca tgtatcagct
     3181 gggcgtgatg ggaacggcag atttgtggct gacggaccat ctgctgacca ccggcagcct
     3241 gtttgcaaat cttgccaaca actacgacaa gtttaactac accaatccgc cgcaggactc
     3301 gcacttaccg cgcgttcgta cccatgtgcg cgagtatgtg cagaacgatg tctatgtgaa
     3361 taacctgcaa gccaactact tccagcatct gggcaacggc ttctacggtc aggtctatgg
     3421 aggttatctc gaaaccatgt ttggcggtgc cggggcagaa gtgttgtatc gtccgctgga
     3481 cagcaactgg gcgtttggtc tggatgccaa ctacgttaaa cagcgcgact ggcgtagtgc
     3541 aaaagatatg atgaaattca ccgactacag cgtgaaaacc ggacatctga ccgcctactg
     3601 gacgccatct ttcgctcagg atgtgttagt taaagccagc gtcgggcagt atctggcagg
     3661 ggataaaggc ggcacgctgg agatcgccaa acgctttgat agcggcgtgg tggtgggtgg
     3721 ctatgccacg atcactaatg tttcaaaaga ggagtacggc gaaggggact tcaccaaagg
     3781 cgtgtatgtc tcggtaccgt tggatctctt ctcgtctggc ccgacacgca gccgtgcggc
     3841 gattggctgg acgccgctga cgcgtgacgg tggtcagcaa cttgggcgta agttccagtt
     3901 gtatgatatg accagcgacc gtagcgtaaa tttccgctaa gtcatgggaa aggtgccagt
     3961 tttcgcactc actggcaccc tcattcttaa tgacctgttg agccatcagg aacgcagttc
     4021 acccccggtt tgcgatctgg tgtgtaaagg cgaaaacatt ctgtcttcct gtccgtcgat
     4081 atcggttgca ggtctggttg cctgagcgac tgggccatca ttgggctgga gacattgctt
     4141 tgcggtaggt cggctttatc agcagtaccg agcggaccag cataagcagg aagaacagag
     4201 actgataaca tcaaagcagc aaaataaggc ttcattttta ccacctttat caggttacgt
     4261 ttcatttgtt ccagaggaac atggtcgatt tttcgcgcat tgctggtggc tgggaatcac
     4321 ctgaatgggt gattttttgg ggctgtgtgt tttgccagat gcgacgttga tgggagatgc
     4381 ccacttaatc aagctgaaca aaacatacac aaaaaatata gatctccgtc acatttttgc
     4441 gttatacagg aagctcgcca ctgtgaagga ggtactgcta tgacgtcact ctctcgtccg
     4501 cgcgtggagt ttatctccac cattttgcag accgtactca atcttggcct gttgtgcctc
     4561 ggcctgattt tggttgtctt cctcggcaaa gaaacggtgc atctggctga tgtgctgttc
     4621 gcgccagaac aaaccagcaa atatgagctg gtagaagggc tggtggttta ctttctctat
     4681 ttcgaattta tcgcgctgat tgtgaagtac tttcagtccg gttttcactt cccgctacgt
     4741 tactttgtct atatcgggat caccgccatt gtgcgcttga tcattgtcga tcataaatcg
     4801 ccactggatg tgttgatcta ctcggctgcg atcctgttac tggtgatcac cctgtggctg
     4861 tgtaattcga aacggctgaa gcgggagtaa aaagacagca cgccgaactg gcgcggcgtg
     4921 ctggacagga agattacagc gcagcagttt gttgtgtttt cttcgtttcc ggttcccaga
     4981 gggcttccag ctcctcaagg gttttacctt tggtttccgg gacaaatttc cacataaaca
     5041 gtgctgccag aacgcccata cacccgtaaa tccagtagga gaaaccgttg tggaaatggg
     5101 ccaccagcca ggagtttttg tccatcatcg ggaaggtcca ggagacgaag tagttcgcca
     5161 gccactgggc cgccaccgcg attgccagcg ctttaccacg aatagcattc gggaagattt
     5221 ccgacagcag tacccagcat accggacccc aggacatggc aaaggcggca acatagaaca
     5281 gcatcgacag tagcgccaca atacccgatg cctgagtgta aaacgcggta ccgaggctaa
     5341 acataccgat tgccattccg agtgcgccga taatttgcag tggcttacga ccaaatttat
     5401 ccaccgtcat aattgccagt acggtaaagg tgaggttgat aactccgaca ataatggtct
     5461 gcaacagcgc gatatccgtg ctggccccca gcgttttgaa cacttccggc gcgtagtaca
     5521 acaccacatt gatgccgaca aattgctgga agatggagag cataacgccg attaaaatca
     5581 cgcccacgcc aaacatcagc agacgaccac cggttttgcg gccatgatcc agggagtgtt
     5641 taatttcctg tactgcctga gttgcaagcg tgttgcccat aattttgcgc aggatacttt
     5701 ccgcctgttc ttgcttgccg cgtgacatca gccagcgagg actttctggc acggtataca
     5761 gcagcattaa gaacagcagt gcagggatac attccgaggc aaacatataa cgccagccgt
     5821 cagtattcag ccagctggca tcaccggaac gggcaataaa atagtttacg cagtaaacta
     5881 aaagttgccc gaaaataatc gcaaactggt taaatgaaac cagttttccg cgaatatgag
     5941 ctggagccag ttccgcaata tacattggtg aaagcattga ggctaaacca acgccaatac
     6001 cgccaataat acgataaata acaaattccg ggacataacc tgccagataa atagggactg
     6061 tgttgtccgg gtttatagag gtaaaaccaa gttctggcca ggcagaacct acaccagaaa
     6121 taaaaaacag gacagcagca atcttaagtg aatcacgacg gccgaagcgg ttactgcaat
     6181 aaccaccgag ggcaccgccg atgatgcaac caatcagagc gctggctacg caaaatccta
     6241 acagggagtt ggcagcggat tcacttaagt tttgtggagc aacaaagacg gtattgagtg
     6301 actcaacagt accggaaata acggcggtgt cgtagccaaa taataaacca cctaatgtag
     6361 cgactaaggt aatcgaaaat atataactgg aattatactg ggtattcatt cagacctgcc
     6421 ttagaccatt ctgatctttt atcagtgcat tgatgttgga attgtcaggc agttaaggca
     6481 attatcattt tttacaatgc gtttacgtaa tgtcttttct gtgatcttaa ttgtgataat
     6541 tatcaaaaat tgatgaaaac aatactattg ccgtgactca gagcacgaaa gagaattatc
     6601 gtaagtggga aaacaaataa cgtaaaaata ataagctcta tgatgggaat attaaccggc
     6661 gaacgattca gattgcagac gaaagaaaaa aaggcgctcc gtggagcgcc gaataatagt
     6721 cacaagttgg gataacgtaa gttgagggtg cagcggcata acattggcag aacaacatct
     6781 ttaacctttc acaccacctg ccgtcaggcc gttgaccagc cagcgttgag ccagcaagaa
     6841 gacgatggtg atcggtaatg cagacatcac ggcagcggcg gcaaagtcac cccacaggta
     6901 gttttgcggg ttgaggtatt gctgcatccc cacggccagg gtgtagctgt ttacgtcacg
     6961 cagtaacagc gacgcgaccg gaacttcagt aatggcagcg ataaacgaca ggatgaatac
     7021 caccgccaga atcggtactg acagcggcaa caggacaagg cggaaggcct gccacggtgt
     7081 cgcaccatcc agcgccgccg cttcttccag cgaactgtcg atggtttcga aatagccttt
     7141 gatggtccag acatgcagcg caatcccacc cagatacgcg aaaattacgc cgccatgagt
     7201 attcagacca atgaatggaa tgtactcacc cagacgatca aacaacgcat acaacgcgac
     7261 cagtgaaagt actgccggga acatctggaa aatcagcatt cctttcagca gcgtcgcttt
     7321 gcctggaaag cgcatacggg cgaaagcgta ggcgcaggtg gtggagagcg ccacaatgcc
     7381 aatcgcggaa atcccggcga cctttaccga gttccacagc cacagcagta ccgggaatgg
     7441 cggtggcgta atgcgaccat cagcctgttc aacgctaaaa cctaacgcca gtttccagtg
     7501 atcccaggag atttgctccg ggatcaggct accggtcgcg aagtttccct gacgcagcga
     7561 gatagcgacg accatcagca gcgggaacat aatcgccgcg ataaaaagta gcagtagcag
     7621 gtgagtaata aacaaacgtg ctttttgcga tttcggttgg accattgcca tttttgttat
     7681 ctcccttaat caaacttcat tcgcgtggct ttcaggttca ctatcgccag cgcacccacc
     7741 agcaggaaga tcagcgtggc aattgctgcc gccagaccga agtcctgacc cccgccgcct
     7801 tcaaaagcga tgcggtaagt gtagttaaca agcaggtcgg tataaccggc tggcgtggtc
     7861 gtgccaagac gatccgggcc gccgttggtt aacagctgaa tcagcacgaa gttgttaaag
     7921 ttaaaggcga agctggcgat catcagcggc gtcagcggtt taatcagcag cggcagcgta
     7981 atcttaaaga agttctggaa cggacctgcg ccatccattg ctgaggcttc atacaaatcg
     8041 tccggaatcg ctttcagcaa gcccatgcag aggatcatca tgtacggata acccagccag
     8101 gtattgacga taatcagcat cgtgcgggcg gtggtcggat cgctgaacca ggcgggcttc
     8161 acgccaaaca gcgcgctcaa catcatgttg atttcaccga agctctggtt aaacaatcct
     8221 ttgaaaatca agattgaaat gaacgatggc accgcgtagg gcagaatcag caggacgcga
     8281 tagaccgctt tgccgcgcaa cgcttcccac tgcaccagac atgccagaac catgccgacc
     8341 gccaccgtta aaaagacagt gatcagcgag aacaccacgg tccagacgaa aatggcgagg
     8401 aacggtttct gaatgccttc gtcggtaaag acgcgggtaa agtttttcca gccggtggtc
     8461 acggtgtaac cggggcttag cttttcatca ccccagttgc cgtcggcggt aatggactgg
     8521 taaaagccaa tttggttatt cggacgatat ttcacgccgc tctgattatt cgtcaacgtg
     8581 ccgtcaccgt cgagtgtgta gagcggctgc gtgccagaaa actggcgcag ggagctcatc
     8641 atcactttgt tgccatccgg cagaatggcg gtaatgtcac tcagcgcctg acgattctgg
     8701 gtaatcacgc gtagattcgc gcgttcgcct tcgggctggg cggtcgtttc tttcagttgc
     8761 agtttttgct cgccgccaaa tttaaaagcg tcggaaaggt aatttttgcc ggtttcgccg
     8821 tcactgagcg ccagttgcca ctcatcgccc gccgggtaaa gaccaaagtt ataggttttg
     8881 cctgcttgcc aggagcgatc taacaacact tcctgtgcac gttcaaaagt cagctggtta
     8941 gtgctgctgt agttggtgaa ggcaatggcg atggtgcaga ccagagggaa gaggacgaat
     9001 aatcccattc cagccattcc cgggtaaaca tagcgccagg cgtaggcttt acgattggcg
     9061 aaaatataca gccccgctga actcaatatc agcgtggtaa tggcgaacag gtattcccct
     9121 tgtgcgtaca ttaaaacaac aaggtaaccc accagcaggc cgagcagacc tagcactgac
     9181 catttcagcg cgtcgctttg ccaccaatgt ttctttttaa tgacatccat ggggttcttc
     9241 ctcattccag gacggataag gctttcacgc cttatccgac aacaactgcc tgatgcgaca
     9301 ctgatgcgtc ttatcaggcc tacatgcgtt tcagttttgt aggccggaca aggcgttcac
     9361 gccgcatccg gcatttcaca gcattacttg gtgatacgag tctgcgcgtc tttcagggct
     9421 tcatcgacag tctgacgacc gctggcggcg ttgatcaccg cagtacgcac ggcataccag
     9481 aaagcggaca tctgcgggat gttcggcatg atttcacctt tctgggcgtt ttccatggtg
     9541 gcggcaatac gtggatcttt cgccaactct tcctcgtaag acttcagcgc cactgcaccc
     9601 agcggtttgt ctttattgac cgcttccaga ccttcgtcag tcagcagata gttttcgagg
     9661 aactctttcg ccagctcttt gttcggactg gcggcgttaa taccggcgct cagcacgcca
     9721 acgaacggtt tagatggttg acccttgaag gtcggcagta ccgttacacc ataattcact
     9781 ttgctggtgt cgatgttgga ccatgcccac gggccgttga tggtcatcgc tgtttcgcct
     9841 ttattaaagg cagcttctgc gatggagtaa tcggtgtctg cattcatgtg tttgttttta
     9901 ataaggtcaa ccaggaaggt cagacccgct ttcgcgccag cgttatccac gcccacgtct
     9961 ttaatatcgt acttgccgtt ttcatacttg aacgcataac ccccgtcagc agcaatcagc
    10021 ggccaggtga agtacggttc ttgcaggttg aacatcagcg cgctcttacc tttcgctttc
    10081 agttctttat ccagcgccgg gatctcttcc caggtttttg gtgggttcgg cagcagatct
    10141 ttgttataaa tcagcgataa cgcttcaaca gcgatcgggt aagcaatcag cttgccgttg
    10201 taacgtacgg catcccaggt aaacggatac agcttgtcct ggaacgcttt gtccggggtg
    10261 atttcagcca acaggccaga ttgagcgtag ccaccaaagc ggtcgtgtgc ccagaagata
    10321 atgtcagggc catcgccagt tgccgcaacc tgagggaatt tctcttccag tttatccgga
    10381 tgctcaacgg tgactttaat tccggtatct ttctcgaatt tcttaccgac ttcagcgaga
    10441 ccgttatagc ctttatcgcc gttaatccag attaccagtt taccttcttc gattttggcg
    10501 agagccgagg cggaaaacat catcgtcgtt aatgcggata atgcgaggat gcgtgcacct
    10561 gtttttattt tcataatcta tggtccttgt tggtgaagtg ctcgtgaaaa cacctaaacg
    10621 gactctagtt tctttatacg gcaacctctt tccatcctcc ttgcccctac gccccaccgt
    10681 tgctttgtgt gatctctgtt acagaattgg cggtaatgtg gagatgcgca cataaaatcg
    10741 ccacgatttt tgcaagcaac atcacgaaat tccttacatg acctcggttt agttcacaga
    10801 agccgtgttc tcatcctccc gcctcctccc ccataaaaaa gccagggggt ggaggattta
    10861 agccatctcc tgatgacgca tagtcagccc atcatgaatg ttgctgtcga tgacaggttg
    10921 ttacaaaggg agaagggcat ggcgagcgta cagctgcaaa atgtaacgaa agcctggggc
    10981 gaggtcgtgg tatcgaaaga tatcaatctc gatatccatg aaggtgaatt cgtggtgttt
    11041 gtcggaccgt ctggctgcgg taaatcgact ttactgcgca tgattgccgg gcttgagacg
    11101 atcaccagcg gcgacctgtt catcggtgag aaacggatga atgacactcc gccagcagaa
    11161 cgcggcgttg gtatggtgtt tcagtcttac gcgctctatc cccacctgtc agtagcagaa
    11221 aatatgtcat ttggcctgaa actggcaggc gcaaaaaaag aggtgattaa ccaacgcgtt
    11281 aaccaggtgg cggaagtgct gcaactggcg catttgctgg atcgcaaacc gaaagcgctc
    11341 tctggcggtc agcgtcagcg tgtggcgatt ggccgtacgc tggtggccga gccaagcgta
    11401 tttttgctcg atgaaccgct ctccaacctc gatgctgcac tgcgtgtgca aatgcgtatc
    11461 gaaatctccc gtctgcataa acgcctgggc cgcacaatga tttacgtcac ccacgatcag
    11521 gtcgaagcga tgacgctggc cgacaaaatc gtggtgctgg acgccggtcg cgtggcgcag
    11581 gttgggaaac cgctggagct gtaccactat ccggcagacc gttttgtcgc cggatttatc
    11641 ggttcgccaa agatgaactt cctgccggta aaagtgaccg ccaccgcaat cgatcaagtg
    11701 caggtggagc tgccgatgcc aaatcgtcag caagtctggc tgccagttga aagccgtgat
    11761 gtccaggttg gagccaatat gtcgctgggt attcgcccgg aacatctact gccgagtgat
    11821 atcgctgacg tcatccttga gggtgaagtt caggtcgtcg agcaactcgg caacgaaacc
    11881 caaatccata tccagatccc ttccattcgt caaaacctgg tgtaccgcca gaacgacgtg
    11941 gtgttggtag aagaaggtgc cacattcgct atcggcctgc cgccagagcg ttgccatctg
    12001 ttccgtgagg atggcactgc atgtcgtcga ctgcataagg agccgggcgt ttaagcaccc
    12061 cacaaaacac acaaagcctg tcacaggtga tgtgaaaaaa gaaaagcaat gactcaggag
    12121 atagaatgat gattactctg cgcaaacttc ctctggcggt tgccgtcgca gcgggcgtaa
    12181 tgtctgctca ggcaatggct gttgatttcc acggctatgc acgttccggt attggctgga
    12241 caggtagcgg cggtgaacaa cagtgtttcc agactaccgg tgctcaaagt aaataccgtc
    12301 ttggcaacga atgtgaaact tatgctgaat taaaattggg tcaggaagtg tggaaagagg
    12361 gcgataagag cttctatttc gacactaacg tggcctattc cgtcgcgcaa cagaatgact
    12421 gggaagctac cgatccggcc ttccgtgaag caaacgtgca gggtaaaaac ctgatcgaat
    12481 ggctgccagg ttccaccatc tgggcaggta agcgcttcta ccaacgtcat gacgttcata
    12541 tgatcgactt ctactactgg gatatttctg gtcctggtgc cggtctggaa aacatcgatg
    12601 ttggcttcgg taaactctct ctggcagcaa cccgctcctc tgaagctggt ggttcttcct
    12661 cttttgccag caacaatatt tatgactata ccaacgaaac cgcgaacgac gttttcgatg
    12721 tgcgtttagc gcagatggaa atcaacccgg gcggcacatt agaactgggt gtcgactacg
    12781 gtcgtgccaa cctgcgtgat aactatcgtc tggttgatgg cgcatcgaaa gacggctggt
    12841 tattcactgc tgaacatact cagagtgtcc tgaagggctt taacaagttt gttgttcagt
    12901 acgctactga ctcgatgacc tcgcagggta aaggtctgtc gcagggttct ggcgtcgcgt
    12961 ttgataacga aaaatttgcc tacaatatca acaacaacgg tcacatgctg cgtatcctcg
    13021 accacggtgc gatctccatg ggcgacaact gggacatgat gtacgtgggt atgtaccagg
    13081 atatcaactg ggataacgac aacggcacca agtggtggac cgttggtatt cgcccgatgt
    13141 acaagtggac gccaatcatg agcaccgtga tggaaatcgg ctacgacaac gtcgaatccc
    13201 agcgcaccgg cgacaagaac aatcagtaca aaattaccct cgcacaacaa tggcaggctg
    13261 gcgacagcat ctggtcacgc ccggctattc gtgtcttcgc aacctacgcc aagtgggatg
    13321 agaaatgggg ttatgactac aacggcgata gcaaggttaa cccgaactac ggcaaagccg
    13381 ttcctgctga tttcaacggc ggcagcttcg gtcgtggcga cagcgacgag tggaccttcg
    13441 gtgcccagat ggaaatctgg tggtaatagc aaaacctggg ccggataagg tgcttgcgcc
    13501 gcatccggca accaacgcct gatgcgacgc ttgcgcgtct tatcaggcct acaacggctg
    13561 tcaaatgtag gccggataag gcgtttacgc cgtatccggc ataaaaacag gttgtcatta
    13621 tctgaaaggg gcgcaagccc ctctgattat cgggtttagc gcgctattgc ctggctaccg
    13681 ctgagctcca gattttgagg tgaaaacaat gaaaatgaat aaaagtctca tcgccctctg
    13741 tttatcagca gggttactgg caagcgcgcc tggaatcagc cttgccgatg ttaactacgt
    13801 accgcaaaac accagcgacg cgccagccat tccatctgcc gcgctgcaac aactcacctg
    13861 gacaccggtc gatcaatcta aaacccagac cacccaactg gcgaccggcg gccaacaact
    13921 gaacgttccc ggcatcagtg gtccggttgc tgcgtacagc gtcccggcaa acattggcga
    13981 actgaccctg acgctgacca gcgaagtgaa caaacaaacc agcgtttttg cgccgaacgt
    14041 gctgattctt gatcagaaca tgaccccatc agccttcttc cccagcagtt atttcaccta
    14101 ccaggaacca ggcgtgatga gtgcagatcg gctggaaggc gttatgcgcc tgacaccggc
    14161 gttggggcag caaaaacttt atgttctggt ctttaccacg gaaaaagatc tccagcagac
    14221 gacccaactg ctcgacccgg ctaaagccta tgccaagggc gtcggtaact cgatcccgga
    14281 tatccccgat ccggttgctc gtcataccac cgatggctta ctgaaactga aagtgaaaac
    14341 gaactccagc tccagcgtgt tggtaggacc tttatttggt tcttccgctc cagctccggt
    14401 tacggtaggt aacacggcgg caccagctgt ggctgcaccc gctccggcac cggtgaagaa
    14461 aagcgagccg atgctcaacg acacggaaag ttattttaat accgcgatca aaaacgctgt
    14521 cgcgaaaggt gatgttgata aggcgttaaa actgcttgat gaagctgaac gcctgggatc
    14581 gacatctgcc cgttccacct ttatcagcag tgtaaaaggc aaggggtaat tacgccccac
    14641 agtgctgatt ttgcaacaac tggtgcgtct cctggcgcac ctttttttat gcttccttcc
    14701 tgggatatga gcgatttttt atagtaactc acttcttctt cactaagaat atccattatc
    14761 tcaatgcctt atcagagatt cttttccttt cgccggtagt gtctggacat tcaggctact
    14821 tttccaggtt attttatttc tgttatgcag aggttttatg ataagtcata tcctaaattc
    14881 tggcggcaat aactctttga tgaaacatga tgtggtgcaa ggaaataata tagtagatct
    14941 tgatttacta cgtaatttca atggggtgcc aggtttaaac agagataact ttatttatat
    15001 cagcaatatt ttttcaaata taaa
//
LOCUS       DAPGWB010000108        14998 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.109, whole genome shotgun sequence.
ACCESSION   DAPGWB010000108 DAPGWB010000000
VERSION     DAPGWB010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14998
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.109"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(107..1750)
                     /gene="yeeO"
                     /locus_tag="RHX79_003193"
     CDS             complement(107..1750)
                     /gene="yeeO"
                     /locus_tag="RHX79_003193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic metabolite efflux MATE transporter YeeO"
                     /protein_id="HDV2198337.1"
                     /translation="MLRHILTAKNLLSNPIFKFPNCLPFLSTVCCICRQFVGENLCSF
                     ADSPSLFEMWFHFLQLRSALNISSALRQVVHGTRWHAKRKSYKVLFWREITPLAVPIF
                     MENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLG
                     KRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKALALTYLEL
                     TVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGFV
                     GAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVE
                     SVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVG
                     QIAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILIWLNALF
                     MPIWSASWVLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVGVWMGMF
                     ADWAVRAVLFYWRMVTGRWLWKYPRSEPQKCEKKPAVSE"
     gene            1755..1830
                     /locus_tag="RHX79_003194"
     tRNA            1755..1830
                     /locus_tag="RHX79_003194"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1788..1790,aa:Asn,seq:gtt)
     gene            complement(1868..2818)
                     /gene="cbl"
                     /locus_tag="RHX79_003195"
     CDS             complement(1868..2818)
                     /gene="cbl"
                     /locus_tag="RHX79_003195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator Cbl"
                     /protein_id="HDV2198338.1"
                     /translation="MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDEL
                     GIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHT
                     QARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVA
                     FPWFRWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRRGITGRSRIDDAFARKGLLA
                     DIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKR
                     GQLQRNYVWRFLELCNAGLSVEDIKRQVMENSEEEIDYQI"
     gene            complement(2920..3837)
                     /gene="nac"
                     /locus_tag="RHX79_003196"
     CDS             complement(2920..3837)
                     /gene="nac"
                     /locus_tag="RHX79_003196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen assimilation transcriptional regulator
                     NAC"
                     /protein_id="HDV2198339.1"
                     /translation="MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELN
                     QQLLIRTKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTA
                     ASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQA
                     LLKEDLFLVGTQDCPGQSVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGE
                     IESIATLTAAIASGMGVAVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANL
                     SPQAQAVKELLMSVISSPVMEKRQWQLVS"
     gene            4164..4239
                     /locus_tag="RHX79_003197"
     tRNA            4164..4239
                     /locus_tag="RHX79_003197"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4197..4199,aa:Asn,seq:gtt)
     gene            complement(4295..5230)
                     /gene="ldtA"
                     /locus_tag="RHX79_003198"
     CDS             complement(4295..5230)
                     /gene="ldtA"
                     /locus_tag="RHX79_003198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310812.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HDV2198340.1"
                     /translation="MMRRVNIFCSFALLFASHNSLAVTYPLPPEGSRLVGQSFTVTVP
                     DHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPATVRKGIVVN
                     VAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
                     KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKY
                     LFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLR
                     AFISGQEVDVNRANAALQRRSGMPVQISSGSRQMF"
     gene            complement(5292..6371)
                     /gene="cobT"
                     /locus_tag="RHX79_003199"
     CDS             complement(5292..6371)
                     /gene="cobT"
                     /locus_tag="RHX79_003199"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HDV2198341.1"
                     /translation="MQTLADLLNTIPAIDPAAMSRAQRHIDGLLKPVGSLGRLEALAI
                     QLAGMPGLNGIPHVGKKAVLVMCADHGVWEEGVAISPKEVTAIQAENMTRGTTGVCVL
                     AAQAGANVHVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRRQAVKLLLDVICYT
                     RELAKNGVTLFGVGELGMANTTPAAAIVSTITGRAPEEVVGIGANLPTDKLANKIDVV
                     RRAITLNQPNPQDGVDVLAKVGGFDLVGMAGVMLGAASCGLPVLLDGFLSYAAALAAC
                     QMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGSGAALAMPIIEAACA
                     IYNNMGELAASNIVLPGNTTSDLNS"
     gene            complement(6383..7126)
                     /gene="cobS"
                     /locus_tag="RHX79_003200"
     CDS             complement(6383..7126)
                     /gene="cobS"
                     /locus_tag="RHX79_003200"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HDV2198342.1"
                     /translation="MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLL
                     GAISGLVFMVLQAWCGVPLAALFSVLVLALMTGGFHLDGLADTCDGVFSARSRDRMLE
                     IMRDSRLGTHGGLALIFVVLAKILVLSELALRGEPILASLAAACAVSRGTAALLMYRH
                     RYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQL
                     LKRTLGGQTGDTLGAAIELGELVFLLALL"
     gene            complement(7123..7668)
                     /gene="cobU"
                     /locus_tag="RHX79_003201"
     CDS             complement(7123..7668)
                     /gene="cobU"
                     /locus_tag="RHX79_003201"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HDV2198343.1"
                     /translation="MMILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARI
                     EHHRQGRPAHWRTVERWQHLDELIHADINPHEAVLLECVTTMVTNLLFDYGGDKDPDE
                     WDYQAMEQAINAEIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQ
                     QLAAAANEVWLVVSGIGVKIK"
     gene            complement(7802..8161)
                     /locus_tag="RHX79_003202"
     CDS             complement(7802..8161)
                     /locus_tag="RHX79_003202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001313967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HDV2198344.1"
                     /translation="MHCRGCGFIGEEWQQDFQPLDGGPVQSLSDAYSDYSVLLLIAAE
                     SEISVPEWLAHSEGTTVILIAEHNARLLTGPAGGAVALIHYLNEICHSRETAVNDAFC
                     QTLTRGSLAIPHSHLLS"
     gene            8140..8436
                     /locus_tag="RHX79_003203"
                     /pseudo
     CDS             8140..8436
                     /locus_tag="RHX79_003203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001585847.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization protein"
     gene            complement(8537..8866)
                     /locus_tag="RHX79_003204"
     CDS             complement(8537..8866)
                     /locus_tag="RHX79_003204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310836.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HDV2198345.1"
                     /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLL
                     LDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGE
                     MKNGEAK"
     gene            complement(9038..10096)
                     /locus_tag="RHX79_003205"
     CDS             complement(9038..10096)
                     /locus_tag="RHX79_003205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDV2198346.1"
                     /translation="MRADKSLSPFEIRVYRHYRIVHGTRVALAFLLTFLIIRLFTIPE
                     STWPLVTMVVIMGPISFWGNVVPRAFERIGGTVLGSILGLIALQLELISLPLMLVWCA
                     AAMFLCGWLALGKKPYQGLLIGVTLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFTG
                     IWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIA
                     PASKETRIPKSIYEGIQTINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQ
                     QILLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNME
                     TAHQLELLSNLICRALRK"
     gene            complement(10295..10768)
                     /gene="sbmC"
                     /locus_tag="RHX79_003206"
     CDS             complement(10295..10768)
                     /gene="sbmC"
                     /locus_tag="RHX79_003206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor SbmC"
                     /protein_id="HDV2198347.1"
                     /translation="MNYEIKQEDKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVP
                     KEWVAIYYDNPDETPAEKLRCDTVVTVPGYFTLPENSEGVILTEISGGQYAVAVARVV
                     GDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPKHH"
     gene            complement(10887..12053)
                     /gene="dacD"
                     /locus_tag="RHX79_003207"
     CDS             complement(10887..12053)
                     /gene="dacD"
                     /locus_tag="RHX79_003207"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase DacD"
                     /protein_id="HDV2198348.1"
                     /translation="MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDY
                     TTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVF
                     VGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLH
                     LKDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRN
                     GLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLR
                     WGQQNFTTVQILHRGKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLD
                     GKELTAPISAHQRVGEIELYDRDKQVAHWPLVTLESVGEGSMFSRLSDYFHHKA"
     gene            12242..13669
                     /gene="sbcB"
                     /locus_tag="RHX79_003208"
     CDS             12242..13669
                     /gene="sbcB"
                     /locus_tag="RHX79_003208"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HDV2198349.1"
                     /translation="MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIG
                     EPEVFYCKPVDDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFNVPKTCILGY
                     NNVRFDDEVTRNVFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDG
                     LPSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLM
                     ALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAIIMVDLAGDISPLLELDS
                     DTLRERLYTAKTDLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNL
                     KILRENPQVREKVVAIFAEAEPFTPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLP
                     ALDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQGYADELQML
                     AQQYADNKEKVALLKALWQYAEEIV"
     gene            complement(13712..13939)
                     /locus_tag="RHX79_003209"
     CDS             complement(13712..13939)
                     /locus_tag="RHX79_003209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDV2198350.1"
                     /translation="MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATE
                     AIPQWAAEEGHAITDYQQIGDAAWSITVQKA"
     gene            complement(13953..14957)
                     /gene="yeeE"
                     /locus_tag="RHX79_003210"
     CDS             complement(13953..14957)
                     /gene="yeeE"
                     /locus_tag="RHX79_003210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transport protein YeeE"
                     /protein_id="HDV2198351.1"
                     /translation="MQRGRFCLTGGFRDMYIAKNNRMFYALLIAISVQSVGVFALIQA
                     GLLTYEARAFPWLGTVIGGYIFGLGIVLAGGCATGTWYRAGEGLIGSWIALFTYMVMS
                     AVMRSPHASGLNQTLQHYSTEHNSIAETFNLSVWPLVTVLLVITLLVVMKELKKPKLK
                     VATLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGITSPTANI
                     LQFLVAGDVKYINWGVFLVLGIFVGSFIAAKASREFRVRAADAQTTLRSGLGGVLMGF
                     GASIAGGCSIGNGLVMTAMMTWQGWIGLVFMILGVWTASWLVYVRPQRKARLATAAAN
                     "
BASE COUNT         4076 a         4003 c         3336 g         3583 t
ORIGIN      
        1 agaggaatcg tgagaacgag gcgaatatta gcgatgccca cccataatgt caaagcctgt
       61 tttttaaatt tgaaatcgtt tgctgaaata atctgcattt tgtcgtttat tccgacacag
      121 ctggcttttt ttcacacttt tgcggttcgg atcgagggta tttccacagc caacgtccag
      181 taaccattcg ccagtaaaac agcacggccc gcacagccca gtcggcaaac attcccatcc
      241 agacaccaac cacaccccag ccaagcatga tgcccagcac ataaccgacg acaacccggc
      301 aaccccacat gctcaacata gaaacccaca tggcgtaacg ggcatcgcga gcacctttaa
      361 atccagcggg tagcacccat gaggcggacc aaataggcat aaataaagca tttagccaaa
      421 tcagaatcac aacgacatgt ttaacctgtg gatcctgggt gtaaaacgat gccataaccc
      481 cggcaaaggg agccgttagc caggcgatgg ccgttaatcc aagagtggaa agccagaaca
      541 catgccgcaa ctgaatctct gcttgcgcta tctgccctac ccccaacctt cggcctgtaa
      601 tgatcgtaga agcagagccg agcgcacttc cgggtaagtt gataagagcc gcaattgaaa
      661 acgcgataaa atttccggca ataacactgg tccccatccc ggcaacgaac atttgggtta
      721 ataaccgacc actggtaaat aacactgatt cgacactcgc tggaatacca atccccatga
      781 cttcccagat aatgctaaaa ttcagcggtt taaaatagct ctttaacgaa atccttagcg
      841 caggattaaa accaatcgcc agcacccaca aaattgcaac tgcgccaata taacgagaaa
      901 tggttaaacc caacccagcc ccgacaaatc ccagtcccgg ccaggagaaa aggccgtaaa
      961 tcaatatgcc gctaataata atattaagaa tattcaggct accgttaatc agtagcggta
     1021 ttttcgtatt ccctgcacca cgaagtgccc cgctaccaat caaagtgatg gcagctgctg
     1081 gataactgag taccgtcagc tccagataag tcaacgccag tgctttaact tctgtcgtgg
     1141 catcacccgc gacgaaatca ataatttgtt cgccaaaatg atgaataagc gttgccaaca
     1201 gtacggcaaa caacgtcatg atcaccaatg actgccgcgt cgccaccctc gctcgtcgtc
     1261 gatcccgctt accgagacta aatgccacaa cgacagtagt accaagatcg atagctgcaa
     1321 aaaaagccat aatgaccata ttgaagctgt ccgccaatcc cacgccggcc atcgcatctt
     1381 ttcccagcca gctgaccaga aaagtgctca ggacacccat caacaggaca caggcattct
     1441 ccatgaagat aggaacagca agcggggtta tctcgcgcca gaacaacact ttgtagctct
     1501 tgcgtttagc gtgccagcga gtgccgtgaa caacctggcg taaagcagag gagatattca
     1561 aagccgacct taattgcaga aagtgaaacc acatttcaaa taatgaggga gaatcagcaa
     1621 agctgcaaag attttcgcca acaaattgtc tgcaaatgca acaaactgtt gatagaaacg
     1681 gcaaacagtt ggggaattta aaaatcgggt ttgacaaaag atttttcgcc gttaagatgt
     1741 gcctcaacag cgattcctct gtagttcagt cggtagaacg gcggactgtt aatccgtatg
     1801 tcactggttc gagtccagtc agaggagcca aatttctgaa aagcccgctt ttatagcggg
     1861 ctttttgcta tatctgataa tcaatttcct cttcactgtt ttccatcacc tgccgcttga
     1921 tatcctcaac tgacagtcct gcattacaaa gttccagaaa gcgccagaca tagttacgct
     1981 gaagttgtcc tcgcttcagt cccaaccaga cagtattagc atcgaaaaga tgccgcgtat
     2041 ccagacggat taaattctct tcctcttgtt cgccgctgga ttgttcggca actaatccga
     2101 tcccaagccc aagagcaaca taggttttaa tgacatcaga atcctgcgca cttaatacaa
     2161 tatctgccag caaacctttg cgggcaaatg cgtcatcaat acgtgagcgc cccgtaatcc
     2221 cccgtcggta agtgattaac ggccacttcg ctattgattc cagcgtcaat ggtgtaattt
     2281 gcgttaaggg atgatcgagt ggaacaagca aactatggtg ccaacgaaac cacgggaagg
     2341 cgacgagctg cgggtcatta ctcaaacgct cgctggcgat accaatatca gcttcgccat
     2401 tttgcaacaa cgtcgcaatt tcctgtggcg tcccctggat tagctcgagc cgaacctccg
     2461 ggaaaagttc gcgaaaagct ttaatgacct ctggcaagct ataacgtgcc tgagtatgcg
     2521 tcgttgcaat agtgagaacg ccagacgtat cgttggtaaa caggtctgca agccgacgaa
     2581 cattactggc ttcattcaga atacgttctg caatgaccag taatgctttg cccggttcag
     2641 tcatgcccag cagtcgctta cctcgtcgaa caaatatttc gatgccaagt tcatcctcca
     2701 gttcccgaat atgacggctg acgcctgact gtgaggtaaa aagcatattc gcaacctctg
     2761 tcaggttgta atcctgacgt gcagcctcgc ggattatctt tagttgttgg aaattcacgg
     2821 taaactccgg gcagttcaga tttcccgtta ttgttaaagt ctaatgcccg gcataacaaa
     2881 taataaaaac ccgcatctta ttccattccg atataacact tagctcacca attgccactg
     2941 ccttttttcc atcactggag aactaatcac tgacattaac aactctttca ctgcctgtgc
     3001 ctgtggcgat aagttcgctc tggcgggtaa atttaatgac aaagagagac tcatggaagg
     3061 agtggtaatg cgtgacatcc acccatttac tgcgccacat aacgaacgcg cggccgattc
     3121 gggtaatact gcaacgccca tgccgctggc aatcgctgcg gtaagcgtgg caatagactc
     3181 aatttcacca ataacttttg ccgtgagtcg ccgtagggaa aaagcctcat caacacgaag
     3241 tctaatagca ctgtaatcac tggggagaaa gaggttcatt tgcgcaatag cattcacatc
     3301 aacgctttgc cccggacaat cttgagttcc taccaggaaa agatcttctt tcagcaaagc
     3361 ctgactggat accccagcca caggggaatg ctcataaatc accgccatat cgagttggtg
     3421 atttatcagt ttttcgttaa gcactgcacc gctattttca tgaagataga taacgatctc
     3481 cgggaattca gcgcgaaccg cctgtaataa gggcatggtg atggatgacg cagcggttcc
     3541 tggcgcaaag ccaatcgaga cttgccccga taatgcctga ccaacgttat gcaccgccag
     3601 ttgggcctgc tcacactgac gtaaaatggc ccgcgcatgg gtatagagaa tttttccggc
     3661 gtctgttggc gtaacgcccc gttttgtgcg aatcaaaagt tgttgattta actcaccttc
     3721 cagtgtggca acctgctggc tgagcgctgg ttgtgcaata tgcaatactt cagcagcctg
     3781 ggtcaggcta ccaatatcta caatttttac gaagtatttc aggcgtctga agttcatgtt
     3841 gcctccggtt tttaagaatc ggcccaagtg ccgccattac ttacaaccag actgcaagat
     3901 gcttgccagt tttattttgg cattgatgta caagctaacc aactgtcaaa taagagatta
     3961 tgatagattc gtcatttgct cctttaatca gctgtcgcgt tcccctgccc tataaaagga
     4021 gggtatgcac cacgatgatt cattacccaa taagattgaa agctcaccac tttgttgaaa
     4081 ttgacagcaa acaaacaaaa aaatgcattt caccctttga catcaccatg cactgccatt
     4141 aatatgcgcc ccgttcacac gattcctctg tagttcagtc ggtagaacgg cggactgtta
     4201 atccgtatgt cactggttcg agtccagtca gaggagccaa attcaaaaaa gcctgctttc
     4261 tagcaggctt tttgctttct aattaccaac gctcttaaaa catctgtctt gaaccagaac
     4321 taatttgcac aggcattccc gatcgacgtt gcaacgcagc atttgcgcga tttacatcaa
     4381 cttcttgccc gctgataaac gcccgcaaag atggggttac cggcaatggc acttttcggt
     4441 cagactcata ttctgcacga ttgcgcgaca acggctcatg aacttccagc cagttcgagc
     4501 catctggttc agtggtgtat tttactggct ggtcgataat ttgcacacgc gtcccaacag
     4561 gaacattatc aaacagatat ttgatatcgt cattgcgcag acgaatacag ccctgactta
     4621 cccggagccc aataccaaaa ttggcattgg taccatggat ggcatacaac ctgccaatat
     4681 aaatcgcgta cagccccatg ggattatcgg ggcccgcagg aacaaatgcg ggcaaactct
     4741 cccctcgttt cgcatattcg cgccgagtgt tcggcgttgg cgtccaggtt ggagcttctt
     4801 gtttacgttc aacggtagtc acccagttac gcggggtttc tcgcccagcc tggccgatac
     4861 caataggaaa gacttccaca gtattactgt ctggtgggta gtaataaaga cgcatctcag
     4921 cgacgttaac cacaatccct ttacgaacag tggcgggcaa aatcagttgc tgcggaatgg
     4981 tgagttgcga gccagacttc ggcaaaaaaa catcagcgcc cgggttcgct tccagcatgt
     5041 tacttaaccc ttgcccgtat tgtgcggcaa aagtctccag cggctgggta ttgtgatcag
     5101 gaacagttac agtaaacgac tgccccacta aacggctacc ctctggaggt aatggataag
     5161 ttaccgccag gctattatgg ctggcaaaaa gcagagcaaa tgagcaaaaa atatttacac
     5221 gacgcatcat gtccctttcc taagtcgcga aagctatcag ttaagtatag cttttatcag
     5281 acttttcgtt tttaactgtt caaatcagaa gtcgtattcc ccggtagaac aatattactg
     5341 gcagcaagtt cgcccatgtt gttatatatc gcacaggcag cttcgatgat gggcatcgcc
     5401 agagctgcgc cactcccctc acctaaacgc atctccatat tgagataagg ctccagcccc
     5461 aaatgcgaca gcgcaatacg cgcccctttt tctgccgaca ggtgagaagg aatgagatac
     5521 ggtttgattg caggagacat ctggcaggct gcgagcgcgg cagcataaga aagaaatcca
     5581 tccagcaaca cgggtaaacc gcaggaagca gcgcctaaca tcacgccagc cattccgacc
     5641 aaatcaaatc cacccacttt tgccaggaca tcaacgccat cctgcggatt tggttgattc
     5701 aacgtaatcg cccggcgcac aacatcaatt ttattagcca gtttatctgt cggcaggttt
     5761 gcgccaatcc caaccacttc ttcaggagcc cggccagtga ttgtgctgac tattgccgct
     5821 gccggtgtcg tgtttgccat ccccagttca cctacaccaa acagcgtaac accgtttttt
     5881 gccagctccc gcgtataaca tatgacgtcc aaaagcaact ttacagcctg acggcgactc
     5941 attgccggag ctgaagctat attgccgcta cctcgtgcga cacgcatgtt gataagcccg
     6001 gggataggct cagcagtatc aataccaaca tcaattacgt ggacgttagc gcccgcttgt
     6061 gctgccagca cacacacgcc ggttgttcca cgggtcatat tttcagcctg aatggctgtc
     6121 acttcttttg gggaaatagc gaccccttcc tcccagacgc cgtgatcggc acacataacc
     6181 agtaccgctt ttttgcccac atgcggtatg ccattcaacc ccggcattcc tgccagttgt
     6241 atggcaagcg cctccagcct tcccaggcta ccaacaggtt tgagtaaccc gtcaatatgc
     6301 cgttgtgcac gcgacatagc ggcaggatcg atggcaggga tcgtattcag taaatcggca
     6361 agtgtttgca tgtcacgtct ctttatagca gtgccagcag gaagaccagt tcaccaagct
     6421 ctatagcagc tcccagcgta tcgccggttt gcccgcccag cgtacgtttg agaagctgac
     6481 cgaggatgaa aatcgccacc atcgtcacca ccatagcagc cacaccatgc atacccggca
     6541 ataatacggc agcaaaaata gcggctaagc cgagtgtgac gcaggtttgt cgcccatcaa
     6601 ttttgccaat gaacacattg ccaagccctt cttcccgggc ataacgatga cgatacatca
     6661 ataatgcggc agtcccgcgg ctgaccgcac atgctgccgc cagcgatgca aggatcggtt
     6721 cgccacgcag agccaactcg cttaacacca gaatctttgc cagtacaaca aaaatcaatg
     6781 ccagaccgcc gtgggtgcct aaacggctat cacgcatgat ttccaacatg cgatcgcggc
     6841 tacgtgcaga aaatacgcca tcacaggtat cggcgaggcc gtccaggtgg aatcccccgg
     6901 tcatcagcgc cagcacaagt acgctaaaca gtgccgccag tggtacgcca caccatgcct
     6961 gcagcaccat gaagaccagc ccgctaatcg cgccaagcaa taatccaatt aaaggaaaag
     7021 taataatacc gcgagaataa tgctcgaaat ccagtccctg ggaccagcga cgcggtacag
     7081 gcagacgcgt aataaaagag agcatcgccc aaaataattt actcatttga tttttactcc
     7141 aatacccgaa accaccaacc atacttcatt tgccgcagcg gccagctgct gatttacccg
     7201 cccggcaata tcacgaaaat gtcgtgccag acgactctcc ggcacaatcc ccattcccac
     7261 ttcgttagtc actaatacaa cctttgcggg acaacgttgg caggcagcaa tcaacgactg
     7321 aatctcagca ttaatcgcct gttccatcgc ctgataatcc cattcatcag ggtctttatc
     7381 gccgccataa tcaaacaaca gattagtcac catggtggta acgcattcca gcaatacagc
     7441 ctcatgcggg ttaatgtctg catgaattaa ttcatcaaga tgttgccaac gctccaccgt
     7501 gcgccagtgc gccgggcggc cttgccgatg atgttctatc cgtgcagcca tctcatcatc
     7561 aaggatttgt gaggtggcga tatacagaac ctgtgaagag tccccaataa gcgcctctgc
     7621 atggcgactc ttcccgctcc gtgcgccccc cgtcaccaaa atcatcatac cgactcctga
     7681 ttcaattgta tgatggtatt cattgaacag aacaatggat cccccaccgt tgctgaccgc
     7741 aaaacattta cgcgattaat actgcgcgta atataattaa aaatccagca ttctcaatcc
     7801 attacgaaag aagatggcta tgcggaatag ccagacttcc tcgtgttaac gtctgacaaa
     7861 atgcgtcatt gacagcggtt tctctggaat gacagatttc attcagataa tggattaatg
     7921 ctacagcccc accagccgga ccagtcagca aacgggcatt gtgttctgca atcaaaatta
     7981 ccgtcgttcc ctcagaatga gcgagccatt ctggtacgga tatctcgctt tcagctgcta
     8041 tcaatagcag cactgaataa tcgctatacg catctgataa cgattgcaca ggcccaccat
     8101 caagaggctg gaaatcttgc tgccactcct caccgataaa accgcagcct ctacagtgca
     8161 ttgttggtca gtgcctgcga agcagacatt atcgcgctgg tgcttaatgc ggacgcaccg
     8221 tggtcacctt tttcgccagg ctttacctcg tcaatgaatc gcccggtcat tggagtagta
     8281 accaaagcag atttagccaa catggaacaa atatctttgg tgaaatgttg gttacgggaa
     8341 gctggagcgc acaacgtgtt agtaaccagt gcggttaata acaatagagt tgcagaactt
     8401 tttgccttgc tgcatataga agaagtctgt cgctaatttc gacaggttat cagatgggaa
     8461 tgatgacttt gatacacaga aaagaatcaa tgagcaatga gggttgccgg gcaaccctca
     8521 ttgaataaaa caggaattac ttcgcttcgc cgtttttcat ttcgcccata gctttcagct
     8581 ttttggagat atcacggcgt tctttggaga gctcggcatt tttgatgatg taatcgtcaa
     8641 cacgatcttc atagtcacct ttcatgctgg cgatgatgcc ctggattgct tcaacgctca
     8701 tccccggctt gatgtaatcg ctcaggttgt ccagcagcag aacgcgcttc tggttgtcac
     8761 ggatcttttt ctcaacgtcc tgaatttcac gttgcagttt gttcttacga cggaacagac
     8821 gaacaaattc cagtacgtcc tggaatgaag gcttggtagt ttccattttt atacccctga
     8881 taatgtgaga gtcggattcg tttaagcaac cgctattcgt tagggccaac attactcata
     8941 gctgccgcag atgacaatgc ttttatccct tttcactatc atacccttta tccttgctga
     9001 atcgaagcag cagcaagatg attctgaagt tcaggaatta tttgcgcaag gcccggcaaa
     9061 tcagattcga tagcaactca agctgatgtg ccgtttccat gttcagccac acataaccat
     9121 agattggtgt ttccacaacc ttcaggtcat ggtggttatt gagcaactga cgcagctctt
     9181 ccacagcatc gttcaatttt tccgtattgg caaaaaccgg ctgcggatta ccttcgtaca
     9241 gcgcatgaac aaggctcagc agtatttgct gcatcatgtg ctgggtgtca cgaagttttt
     9301 gcgcgttcaa taacacgaaa tggctggggc gcgtggccca gtacgcattg atttgcaact
     9361 ccagcataca aaccagattg cgattaatgg tctggatacc ttcatatatc gattttggaa
     9421 tacgagtttc tttgctggcg ggcgcaatca gcccacgcat tttcacggca tcggtcaaga
     9481 gtttttgtag atggctttcc agacgtgggc gttcgagtaa gttcggtgag aatgcagatt
     9541 gataaacccg attatactcg gtcaaacttt tcgccagttg aatgcgccag tggatgaacg
     9601 cccgttgtgg ccagataccg gtaaacaaca ttgcgagtaa agagccgagg atcacatcgc
     9661 cgcttcgcca taacgccgta tcaatttcac ctgtcgggga acccacaaca attgccagcg
     9721 tcaccccaat caataatcct tgatacggtt tcttgcccag tgccagccaa ccgcaaagaa
     9781 acatcgccgc cgcgcaccag actaacatca gcggtaacga aattaactcc agttgcagag
     9841 cgataagacc taaaatcgac cccaacaccg taccgccaat acgttcgaag gcgcgaggaa
     9901 caacgttacc ccagaacgag attggcccca taatcaccac catggtgacc agcggccagg
     9961 tgctttcagg gatagtaaac aggcggataa tgagaaaagt gagcaggaat gccagcgcga
    10021 cccgagtacc atgcacaatg cggtaatggc ggtatacccg gatttcaaac gggcttaatg
    10081 acttatcggc acgcacgcag aaactccgta atgaagatta aaagcgctca taactcatct
    10141 gtcggccaga aggcgcgcct ctgaattatc cgacggacaa accgggaaca gtgtaatttc
    10201 ccggcaggag cgaaaaaatt gaaaggcgca tcttactctt ttcgctttca aaaaaaagag
    10261 tggtcatcgc gtcaacacac cgccctgaga tgaattagtg atgttttggc tgcaccgcaa
    10321 catacatttc gatatcccag tacccatctt ccgcgccatt gttcaaataa acctcgaagc
    10381 agggctttgg taacatttca taagcactgt cctgcaagag gctattaaag aactgatacc
    10441 agggtttagc aaaatcatca ccgactacac gagctaccgc caccgcatac tgaccacctg
    10501 aaatttctgt cagaatgacg ccctcactgt tttcgggaag cgtaaagtaa cccggcaccg
    10561 tcacgacggt gtcgcagcgt aatttttcgg cgggtgtttc atctggattg tcgtaataga
    10621 tagcaaccca ctccttcggc acaatatttt tactatctac ccacatcatc aactgctcaa
    10681 aacctttctt taccgtctgt tcccacgggc caacgagatg gaaacctgca acggtacgtt
    10741 tatcttcctg cttaatctcg tagttcatga cgcccccatt aatactgttt ttatatacag
    10801 tatagttgca aaattaaaac cacaaggaat gagtgttgat tatgcgagca gactcgcact
    10861 cctgccagtc tgctgcaaaa gaaaggtcag gccttatggt ggaaataatc actcaggcgg
    10921 gaaaacatgc tgccttcccc gacagattcc agggtaacca gcggccagtg cgccacctgt
    10981 ttatcacggt cgtaaagttc aatttcccct acccgctgat gggcgctaat tggcgcggtg
    11041 agctctttac catcaagggt atatttggct ttgatatgtg gaatttcggc tttcggtagt
    11101 accatccaga actcttgttc tgttcccagg gcgatatttt ctttatcgcc ataccagatg
    11161 cgttccgtac cgaccttttt cccacggtgc aaaatttgca ccgtagtaaa gttttgttgc
    11221 ccccaacgca gtaattttct tgcctcttcc tcacgacctt ttgcactgtc agcccccatt
    11281 accactgcaa tgagacgacg ctgcccatct acagccgaag caatgagatt aaacccggca
    11341 ccagaagtat gacccgtttt caggccgtca acattcatgg ttttatccca caataacccg
    11401 ttacggtttt gctgagtgat accgttccag gtgaggcttt tctcactgta catatgataa
    11461 aactcgggct cgccgtggat gatagcgcga gaaagcacag ctaaatcata agccgagcta
    11521 tgctggccag gtgcatccag accatgcact gtttcaaaat gcgtatcctt gagatgcagc
    11581 ttctcggcat agttgttcat catttcaaca aactgccgtt gcccaccggc aatatagtca
    11641 gccagtgcaa cacaagcgtc atttccggaa tccacaatta aaccacggct taaatcacgt
    11701 accgatacgc gatcgccctc tttcaaaaac atcagtgaag aaccgacaaa caccggatta
    11761 tctttcgccc acgcatcgcg ccccacggtg acaatatcgt ctggcgtaat gcgatgacta
    11821 tcgatagcgc gatccacgac ataacccgtc atcagctttg tcaggctggc gggattgcgc
    11881 tgttgatgct cattacccgc ggtgaggatc tgtccggtgg tgtaatccat cagtacccag
    11941 gacccggcat gaatctctgg aggctgaggt gaaaaaggaa tgttttccgc cgcaaaacca
    12001 gacgataagt taaaaacgaa caaagaagca gcaataataa gtcggcgttt caacagcaaa
    12061 ccctcaggag tttcaaatag ctgttctttt tacggaaata cttatgaact ggctggaata
    12121 aagtgcaaga aaatgtgact accctctcat ttttatctga catgatcttg tggcgctaaa
    12181 gctgattagt acggtgatat ttgatactct ggcagacagc agaaataacg gatttaacct
    12241 aatgatgaat gacggtaagc aacaatctac ctttttgttt cacgattacg aaacctttgg
    12301 cacgcacccc gcgttagatc gccctgcaca gttcgcagcc attcgcaccg atagcgaatt
    12361 caatgtcatc ggcgaacccg aagtctttta ctgcaagccc gtggatgact atttgcccca
    12421 gcctggagca gtattaatta ccggtattac cccgcaggaa gcacgggcga aaggagaaaa
    12481 cgaagccgcg tttgccgccc gtattcactc gctttttaac gtaccgaaga cctgtattct
    12541 gggctacaac aatgtgcgtt tcgacgacga agtcacacgc aacgtttttt atcgtaattt
    12601 ctacgatcct tacgcctgga gctggcagca tgataactcg cgctgggatt tgctggatgt
    12661 tatgcgtgcc tgttatgccc tgcgcccgga aggaataaac tggcctgaaa atgatgacgg
    12721 tctaccgagc tttcgccttg agcatttaac caaagcgaat ggtattgaac atagcaacgc
    12781 ccacgatgct atggctgatg tgtacgccac tattgcgatg gcaaagctgg taaaaacgcg
    12841 tcagccacgc ctgtttgatt atctctttac ccatcgcaat aaacacaaac tgatggcgtt
    12901 gattgatgtt ccgcagatga aacccctggt gcacgtttcc ggaatgtttg gggcatggcg
    12961 cggcaacacc agctgggtgg caccgctggc gtggcatcct gaaaatcgca atgccataat
    13021 tatggtggat ttggcaggag acatttcgcc attactggaa ctggatagcg acacattgcg
    13081 cgagcgttta tataccgcaa aaaccgatct tggcgataac gccgccgttc cggttaagct
    13141 ggtgcacatc aataaatgtc cggtgctggc ccaggcgaat acgctacgcc cggaagatgc
    13201 cgaccgactg ggaattaatc gtcagcattg cctcgataac ctgaaaattc tgcgtgaaaa
    13261 tccgcaagtg cgtgaaaaag tggtggcgat attcgcggaa gccgaaccgt ttacgccttc
    13321 agataacgtg gatgcacagc tttataacgg ctttttcagt gacgccgatc gcgcagcaat
    13381 gaaaattgtg ctggaaaccg agccgcgtaa tttaccggca ctggatatca cttttgttga
    13441 taaacgaatt gaaaaactgt tgttcaatta tcgggcacgc aacttcccgg ggacgctgga
    13501 ttatgccgag cagcaacgct ggctggagca ccgccgccag gtcttcacgc ccgagttttt
    13561 acaaggttat gcagatgaat tgcagatgct ggcacaacaa tatgccgata acaaagagaa
    13621 agtggcgctg ttaaaagcgc tttggcagta tgcggaagag atcgtctaat ttgaagcctc
    13681 cgccgctggt acggcggagg tcaatgttga gtcaggcttt ttgaacggtg atactccacg
    13741 ctgcatcgcc aatctgctga taatcggtga tggcatgccc ttcttctgcc gcccactgtg
    13801 ggattgcttc agttgcctgg gtgcaatcaa actcaattac caactcatcg ccgctggcca
    13861 tttctgccag tgctgctttt gcttctatga gtggaaacgg acagacctgc gtcaccacat
    13921 ccagcttttt aatcgccatc tttacacctt acttaatttg ccgcagcagt tgccagtcgc
    13981 gccttacgct gcggtcgaac atacacaagc caggacgcag tccagactcc gagaatcata
    14041 aatacaaggc caatccagcc ctgccaggtc atcattgcag tcataaccag tccattaccg
    14101 atagagcaac cacctgcaat actggcaccg aagcccatca gtacaccacc taacccgcta
    14161 cgtaatgttg tttgtgcatc agctgcgcga acgcggaact cacggctcgc tttggctgca
    14221 ataaatgacc ccacgaagat ccctaacacc aggaaaacgc cccagttaat gtatttcacg
    14281 tcacccgcga ccagaaattg cagaatattg gccgttgggg aagtgattcc taacccaaac
    14341 atgcgtccgg ttgcttcact caggggccag gctaaaagcg caatcaaacc gatgagtaca
    14401 gcagtgacaa agggatgcca gcgtttttca aacagaatat gagcgatccc ggttcggcgc
    14461 ggcggtaagg tcgcgacttt gagttttggc ttcttcaact ctttcatcac caccaagagc
    14521 gttatcacca gcaaaacggt aaccaacggc cacacagaca aattaaaagt ctcagcaata
    14581 gagttatgtt cagtactgta gtgctgcaag gtttgattta aaccactggc atgtggagaa
    14641 cgcatcaccg cactcatcac catataagtg aaaagcgcga tccaactgcc gatcaatccc
    14701 tcacccgcgc gataccaggt cccggtggca catccacccg ccagaacaat tcccagcccg
    14761 aagatatacc cacctataac agtaccaagc cacgggaacg ccctggcttc gtaagtcagt
    14821 aggcccgcct gaattaacgc aaaaaccccc acgctttgta ccgaaattgc aatcagcaag
    14881 gcgtaaaaca tgcgattatt tttcgcgata tacatatcgc gaaaaccacc tgtcaggcaa
    14941 aaacgcccac gctgcatgac aaatcccagc agagcaccac aaattagccc gcttaata
//
LOCUS       DAPGWB010000109        14939 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.110, whole genome shotgun sequence.
ACCESSION   DAPGWB010000109 DAPGWB010000000
VERSION     DAPGWB010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14939)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14939)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14939
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.110"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(244..1296)
                     /gene="fbaB"
                     /locus_tag="RHX79_003211"
     CDS             complement(244..1296)
                     /gene="fbaB"
                     /locus_tag="RHX79_003211"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HDV2198352.1"
                     /translation="MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNN
                     RPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAI
                     EAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
                     AVSVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSA
                     DLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQL
                     ANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKL
                     INAVQDVYLDSKITIA"
     gene            1553..2830
                     /locus_tag="RHX79_003212"
     CDS             1553..2830
                     /locus_tag="RHX79_003212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease"
                     /protein_id="HDV2198353.1"
                     /translation="MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYA
                     CTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYS
                     LTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPT
                     NIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCS
                     FLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLL
                     LGLVTAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMR
                     TAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAII
                     AVLFMIFFRESDNEITAIKVDDRDIALTQGEVK"
     gene            2827..3831
                     /locus_tag="RHX79_003213"
     CDS             2827..3831
                     /locus_tag="RHX79_003213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HDV2198354.1"
                     /translation="MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPG
                     PKENNAACYFNRAEFTDDTSMALCLADALLEREGKIDPDLIGRNILDWALRFDAFNKN
                     VLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVTPLGCLLPARDVDSFIDDVALAS
                     SPTHKSDLAVAGAVVIAWAISRAIDGESWSAIVDSLPSIARHAQQKRTTTFSASLAAR
                     LEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCAN
                     LGGDTDTIGAMATAICGALHGVNAIDPALKAELDAVNQLDFNRYATALAKYRQQREAV
                     "
     gene            3828..4793
                     /locus_tag="RHX79_003214"
     CDS             3828..4793
                     /locus_tag="RHX79_003214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HDV2198355.1"
                     /translation="MSGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIE
                     LKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAE
                     GDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGEL
                     LVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAE
                     ITTLGEQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVL
                     AGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV"
     gene            complement(4767..5513)
                     /locus_tag="RHX79_003215"
     CDS             complement(4767..5513)
                     /locus_tag="RHX79_003215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDV2198356.1"
                     /translation="MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHG
                     NILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFS
                     QQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESW
                     VPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVI
                     KQVALDQQQRPIEYSISHCRSDLYVFVCEE"
     gene            complement(5565..6383)
                     /locus_tag="RHX79_003216"
     CDS             complement(5565..6383)
                     /locus_tag="RHX79_003216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 25 protein"
                     /protein_id="HDV2198357.1"
                     /translation="MQLRITSRKKLTSLLCALGLISIVAIYPRQTVNFFYSTAVQITD
                     YIHFYGYRPVKSFAIRIPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKAT
                     EGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVAAPVQARLFLQTVDFSQGDFPAVL
                     DVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAH
                     YYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFHGTVEELQAFVDGIKETP"
     gene            complement(6448..7248)
                     /gene="thiD"
                     /locus_tag="RHX79_003217"
     CDS             complement(6448..7248)
                     /gene="thiD"
                     /locus_tag="RHX79_003217"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDV2198358.1"
                     /translation="MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQ
                     NTRGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNV
                     VLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLE
                     QGRSLLAMGCGAVLMKGGHLDDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAA
                     LAALRPRHTNWADTVQEAKSWLSSALAQADTLEVGHGIGPVHHFHAWW"
     gene            complement(7245..8033)
                     /gene="thiM"
                     /locus_tag="RHX79_003218"
     CDS             complement(7245..8033)
                     /gene="thiM"
                     /locus_tag="RHX79_003218"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HDV2198359.1"
                     /translation="MQVDLLSSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLAL
                     GASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVA
                     VGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTL
                     ARETGAIVVVTGEVDYVTDGHRAVGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTL
                     ENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA"
     regulatory      complement(8068..8164)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(8256..8528)
                     /gene="rcnR"
                     /locus_tag="RHX79_003219"
     CDS             complement(8256..8528)
                     /gene="rcnR"
                     /locus_tag="RHX79_003219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II)-binding transcriptional repressor
                     RcnR"
                     /protein_id="HDV2198360.1"
                     /translation="MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAA
                     IRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDVVLKVLDSYIK"
     gene            8649..9473
                     /gene="rcnA"
                     /locus_tag="RHX79_003220"
     CDS             8649..9473
                     /gene="rcnA"
                     /locus_tag="RHX79_003220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt efflux protein RcnA"
                     /protein_id="HDV2198361.1"
                     /translation="MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIA
                     IKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIIGTA
                     FWMFWRTWRGERNWLENMHEYDHEHHHHDHEDHHDHGHHHHHEHGEYQDAHARAHAND
                     IKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLA
                     LTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR"
     gene            9692..10030
                     /gene="rcnB"
                     /locus_tag="RHX79_003221"
     CDS             9692..10030
                     /gene="rcnB"
                     /locus_tag="RHX79_003221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II) efflux transporter accessory
                     subunit RcnB"
                     /protein_id="HDV2198362.1"
                     /translation="MTIKNKMLLGVLLLVTSAAWAAPATAGSTNTSGISKYELSSFIA
                     DFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIK
                     AYDGEIFYHR"
     gene            complement(10112..11146)
                     /locus_tag="RHX79_003222"
     CDS             complement(10112..11146)
                     /locus_tag="RHX79_003222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative fimbrial-like adhesin protein"
                     /protein_id="HDV2198363.1"
                     /translation="MNIRIMLFIVMMMVMPVSYAACYSELSVQHNLVVQGDFALTQTQ
                     MATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTIKLNLHFEWTNKNNITLSNNQTS
                     FTSGYSVTVTPAASNAKVNVSAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG
                     KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLDSIPVSQLPATGN
                     KATINSKQGDIILRCKNLLGQQNQTSRKMQVYLSSSDLLTNSNTILKGAEDNGVGFIL
                     ESNGSSVTLLNITNSSKGYTNLKEIAAKSKLTDTTVSIPITASYYVYDTNKVKSGALE
                     ATALINVKYD"
     gene            complement(11160..13640)
                     /locus_tag="RHX79_003223"
     CDS             complement(11160..13640)
                     /locus_tag="RHX79_003223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HDV2198364.1"
                     /translation="MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANI
                     RLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSIEVIKRLGINSDNFASGK
                     QCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYV
                     SQYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGF
                     AQLLGTLRVGDMYTSSDIFDSVRFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVT
                     IEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQ
                     PGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGSMVANNYYAFTLGTGW
                     NTRIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRT
                     FNDHVWANNKDNYRRDENDVYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLW
                     RDYWGRSGSSKDYQLSYSNNWRRISYILAASQAYDENHHEEKRFNIFISIPFDWGDDV
                     TTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSYQNQGNETTAGANL
                     TWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDA
                     YVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDSEAELRGNRKIAAPYRGAVVL
                     VNFDTDQRKPWFIKALRADGQPLMFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVN
                     VAIDKQQGLSCTITFGKEIDESRNYICQ"
     gene            complement(13656..14330)
                     /locus_tag="RHX79_003224"
     CDS             complement(13656..14330)
                     /locus_tag="RHX79_003224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HDV2198365.1"
                     /translation="MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQG
                     NRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKES
                     IFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG
                     LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWYLTIIDDHGN
                     YISDKI"
     gene            complement(14411..14938)
                     /locus_tag="RHX79_003225"
     CDS             complement(14411..14938)
                     /locus_tag="RHX79_003225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000682832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2198366.1"
                     /translation="MAAAVFSSFFMSAGVFAADVDTGTLTIKGNMAESPCKFEAGGDS
                     VSINMPTVPTTVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGND
                     KAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQ
                     SGDVLSSLVMRVAQD"
BASE COUNT         3687 a         3757 c         3497 g         3998 t
ORIGIN      
        1 ataacgatca caaaaacgac aatgtgaaaa ttgttcgagg agtaaaaggc aaaaaaaaac
       61 ggcctcccga tagggaagcc gtagcaaagt gcgcgtgttt ttatgccgga tgcggtgtaa
      121 acatacgtgg cagtgctatg taggcatgat aagacgcttc cgcgtcgcat caggcatagg
      181 ttgccggatg cagtgtaaac gccttatccg tcctacgggg tggtgctgtt cgtatgaggc
      241 gtatcaggca atagtaattt tgctatcgag ataaacgtcc tgcacggcat taatcagttt
      301 cacgccgtca gccatcgatt tcttgaacgc cttacgtcca agaatcagcc ccattccgcc
      361 agcgcgtttg ttgataaccg cagtacgcac tgcatcgctg aggtcagttt caccgcccgc
      421 agcaccgccg gagtttatca acccagcccg acccatatag cagttagcta actgataacg
      481 caccagatca atcgggtttt cgctggtcaa tttgctgtaa acacgatcgt cggtgtaacc
      541 gtaattaatt gctttatagc cgccgttatt ttccgccatt ttttgtttga cgatatctgc
      601 accgatggtt gccgccagat ggtttgcctg accggtcagg tcggcggaaa catggtaatc
      661 aacgccatct ttcttaaagg cggagttacg caaataggcc cacagcactg tcaccatacc
      721 cagctcgtgc gcacgttcaa aagccgcaga aatttcttca atctggcgac gtgactcttc
      781 cgagccaaaa tagatagtcg caccaaccga aaccgcgccc atgttgaacg cctgctccac
      841 gctggcatac agcgtttgat cgtaggtatt cgggtaactt agcgtctcgt tgtgattaag
      901 tttgacgagg aatggaatgc gatgcgcata acgccgcgat accgacgcca gcacgccgta
      961 agttgacgcc acacagttac agcccgcttc gatcgccagt tcaacaatgt ttttcgggtc
     1021 aaagtagagc gggttagcag caaatgaagc tccggcagag tgctcaacgc cctggtcaac
     1081 cggcagaata gaaagatatc ctgtgccagc cagacgcccg gtgttgtaca acgtctgcat
     1141 attacgtaac accgctggcg ggcgattatt gtcaatcatt acgcggtcta cgtagtcatg
     1201 tccggggaga taaagctggt cagaaggaat tgtcatacaa cggtgctgta aaaggttgtc
     1261 ggcgtctttg ccaagcaact gcgcaatatc tgtcattact atgctcccgt aaattccgat
     1321 tggatatcgg ctatggattg tcctggcccg ccttttgcgg gcaatcataa tcctggtcgt
     1381 tacgggcgag tttttccatc ttttggatgt tttttcagcg ttttctgttg gctcgattca
     1441 tcagaaaaaa tgttagcgcg gtcaagtttt caccgcaaag gtatttaaaa ggtattatta
     1501 agtggtattg tcatcgcgta ccttacatta cctgtcatga aggaattaaa agatgaaaac
     1561 aacagcaaag ctgtcgttca tgatgtttgt tgaatggttt atctggggcg cgtggtttgt
     1621 gccattgtgg ttgtggttaa gtaaaagcgg ttttagtgcc ggagaaattg gctggtcgta
     1681 tgcctgtacc gccattgcgg cgatcctgtc gccaattctg gttggctcca tcactgaccg
     1741 ctttttctcg gcgcaaaaag tgctggcggt attgatgttc gcaggcgcgc tgctgatgta
     1801 tttcgctgcg caacagacca cttttgccgg gttctttccg ttactgctgg cttactctct
     1861 aacctatatg ccgaccattg cgctgactaa cagcatcgct tttgccaacg tgccggatgt
     1921 ggagcgtgat ttcccgcgca ttcgtgtgat gggcactatc ggctggattg cctccggtct
     1981 ggcatgtggt ttcttgccgc aaatactggg gtatgccgat atctcaccga ctaacatccc
     2041 gctgctgatt accgccggaa gttctgctct gctcggtgtg tttgcgtttt tcctgcccga
     2101 cacgccacca aaaagcaccg gcaaaatgga tattaaagtc atgctcggcc tggatgcgct
     2161 gatcctgctg cgcgataaaa acttcctcgt ctttttcttc tgttcattcc tgtttgcgat
     2221 gccactggcg ttctattaca tctttgccaa cggttatctg accgaagtcg gcatgaaaaa
     2281 tgccaccggc tggatgacgc tcggccagtt ctctgaaatc ttctttatgc tggcattacc
     2341 gtttttcact aaacgctttg gtatcaaaaa ggtattattg cttggtctgg tcaccgctgc
     2401 gatccgctat ggcttcttta tttacggtag tgcggatgaa tatttcacct acgcgttact
     2461 gttcctcggt attttgcttc acggcgtaag ttacgatttt tactacgtta ccgcttacat
     2521 ctatgtcgat aaaaaagccc ccgtgcatat gcgtaccgcc gcgcaggggc tgatcacgct
     2581 ctgctgccag ggcttcggca gtttgctcgg ctatcgtctt ggcggtgtga tgatggaaaa
     2641 gatgttcgct tatcaggaac cggtaaacgg actgactttc aactggtccg ggatgtggac
     2701 ttttggcgcg gtgatgattg ccattatcgc cgtgctgttc atgatttttt tccgcgaatc
     2761 cgacaacgaa attacggcta tcaaggtcga tgatcgcgat attgcgttga cacaagggga
     2821 agttaaatga aaacagaacg tattctcggt gctctttatg ggcaggcgtt aggggatgcg
     2881 atggggatgc cctccgagct ttggccacgc agccgcgtta aagcacactt tggctggatt
     2941 gaccgttttc ttcctggacc aaaggagaat aacgcggcct gttattttaa ccgcgccgaa
     3001 ttcaccgacg atacctcgat ggcgctgtgt ctggcggatg cgttactgga acgtgaaggc
     3061 aagatcgatc cggatctgat tgggcgtaat attctcgact gggcgctgcg tttcgacgcc
     3121 tttaacaaaa acgtactagg tccgacctcg aagattgcgc ttaacgccat tcgcgacggt
     3181 aaacccgttg ctgaactgga aaacaacggc gtgaccaacg gcgcagcgat gcgcgtcacg
     3241 ccattaggtt gtttgcttcc ggcgcgtgat gttgattcct ttattgatga tgtagcgctg
     3301 gcgtccagcc cgacccataa atccgatctg gcggttgcag gcgcggtagt catcgcatgg
     3361 gcgatttctc gtgccattga cggagaaagc tggtcagcga ttgttgattc actgccttca
     3421 attgcgcgac atgcccagca aaaacgcacc accacgttca gcgcctcact ggcggcgcgg
     3481 ctggagattg cgctgaaaat tgtgcgcaat gccgacggca ccgaatccgc cagcgaacag
     3541 ctttaccagg tcgttggcgc aggtaccagc actattgagt ccgttccgtg cgccattgcg
     3601 ctggttgaac tggcacaaac cgacccgaat cgctgcgccg tcctgtgcgc taaccttggc
     3661 ggcgacacag acaccatcgg tgctatggcg acggcaattt gcggcgcgtt gcatggcgtt
     3721 aacgctatcg atcctgcgtt aaaggcggaa ctggatgcgg taaatcagct tgatttcaac
     3781 cgctatgcca cagcgttggc gaaatatcgt caacaacggg aggcggtatg agcggcgctc
     3841 gattacacac gctgctgcct gaattaacca cgcgtcagcc ggtgatggtc gtcggcgcgg
     3901 cggtcattga cgtgatcgcc gacgcttatg ccctcccctg gcgtgggtgc gatatcgaac
     3961 tgaaacagca gagcgttaac gttggcggct gcgcactgaa tattgccgtg gcgttaaagc
     4021 gcctcggcat cgaagcgggt aatgccttgc cgctcggtca gggcgtgtgg gcggagatta
     4081 ttcgcaaccg gatggcaaaa gagggcttaa tcagcctgat cgataacgcc gaaggtgata
     4141 acggctggtg tctggcgctg gttgagccgg atggcgaacg cacttttatg tcattcagcg
     4201 gtgtggaaaa tcagtggaat cgccagtggc tggcgcgatt aaccgttgcg cctggcagcc
     4261 tgctctattt ttccggttat caactggcct cgccctgcgg cgaattgtta gtggaatggc
     4321 tggaagagct gcaagacgtg acgccgttta tcgattttgg cccacgtatt ggcgatatcc
     4381 cggatgcatt actggcgcgg atcatggcct gtcgaccttt agtgtcgctc aatcgtcaag
     4441 aggctgagat tgccgccgaa cgttttgctt tatccgcaga gataacaaca cttggcgagc
     4501 aatggcagga gaaatttgcc gcgccgttga tcgttcgtct cgataaagaa ggcgcatggt
     4561 atttcagcaa cgacgcttct ggctgcattc cggcatttcc aacgcaagtt gtagacacca
     4621 ttggggcggg cgacagtcat gccggtggcg tacttgccgg gctggcctct ggtctgccac
     4681 tggcggatgc cgtattactg ggcaatgcag tggcgtcgtg ggttgtcggg catcggggcg
     4741 gtgattgtgc gccaacgcgc gaggaactac tcctcgcaca caaaaacgta tagatcgctg
     4801 cgacagtggc taatgctgta ctcaataggc cgttgctgtt ggtcaagcgc cacttgcttg
     4861 atcaccagca ccggtatttt gctatctaac tgaatatgtg actgaaactc ggcatccggc
     4921 atccgggcgc taacgcggga acgcgtacgt tgtgggtaaa tgtgctggct gcggaaatag
     4981 tcataaagtg aaatcccgat ggcatcaaca tcatgaatta aatgcgccgg aacccacgat
     5041 tcctcaatcg ataccgcttc ttcatcgaca tagcgaatac gcttaagcaa aaagacatca
     5101 cttcctgctt cgaccgccag ctgctgcgcg acttcttcgg gacatttcac gacacgcttg
     5161 ttaacccata gcgtatcggg ctttttcccg cgcaatacca cctgctgaga aaaacctcgc
     5221 gcttctttca acgagtattc gaagatgttg ttgatctgcg tgccgtaacc gcgcgaacgc
     5281 gtcaccacac cctcttcttc cagcgcctgc atcgccttgc gcaccgtaat gcgcgaaacg
     5341 ccggttaact gacttaaatc acgctcaccg ggcaaaatat tgccatgctc cagcaccccg
     5401 ctgcgcacgg cattttttac cgtttcggca aacttaatat aaagcggcgt gttatccgcc
     5461 gctaaaatac gctcgttcag ttgggcaatc agctgggtat gcgcttgttc catttgtctt
     5521 tttcctgccg aggagtctgg tgggagtata tcactgcttc ttatttaagg cgtttcttta
     5581 atcccatcaa cgaatgcctg caactcctcc accgtgccat gaaatacatt aaaatccacc
     5641 ggaccattga tgccatctac ctgtccacgg tcggaatgct gccagaagcg ccaggccatg
     5701 ccgtcattgt ccggacgacg ttgataatag tgagccaccc accacggata ttcattgaaa
     5761 tagcccgcca gattggtgtg ataaaaaacg gctcctgagt aaataatcgg cttttttccc
     5821 gtactttttt cgaccatttt tagccactga cttactcgtt tgcgtaattc ttttgccgat
     5881 aattttcccc gttcttctac gtccagtacc gcagggaaat cgccttgtga gaaatccacc
     5941 gtttgcagaa ataatcgtgc ctgaaccggc gctgctaccg acggggagaa ataatgatac
     6001 gccccgcgca gcaggccatt ttcgcggctt agttgccagt tacgcgaaaa atacgggtcc
     6061 accagctttt cgccttccgt cgccttaata aaagcaaact gtaagcggat accgttgtcg
     6121 cgcatttttg ccacccgctg ccagtcgatc cgctcctgcc agcgagaaac atctattccg
     6181 tgaatggtgt aactggcagg aatgcgaata gcgaaagatt taaccgggcg ataaccgtag
     6241 aaatggatgt agtctgtaat ctgaactgct gtcgaataga aaaaattcac cgtctgacgc
     6301 ggataaattg caacgatgga aattagccca agagcgcata atagagaggt gagttttttt
     6361 cgactggtaa ttcttagctg cattggtttc atccctgaat gtcagtgcca aaggctgaca
     6421 ataaccaaag cagctatagt acggtgctca ccaccaggcg tggaagtggt gaaccggacc
     6481 aataccgtga ccaacttcca gcgtgtcggc ctgggctaat gctgatgaaa gccagctttt
     6541 tgcctcctgt acggtgtcag cccagtttgt atggcgcggg cgtagtgcag ccaacgccgc
     6601 agagagcgta caaccagtgc cgtgggtgtt tttggtcata atgcgcggtg cggtaaaccg
     6661 ttgttcaccc tcgcgggtaa acagccagtc cgggctttgc tcatcatcca gatgaccacc
     6721 tttcattagc actgcgccac agcccatcgc caacagcgat cgcccttgtt ccagcatttc
     6781 ctgttcggtg cgcgcgtgtg gcgcgtcgag caaggcggca gcttcgggca agtttggcgt
     6841 tattaatgaa acctgtggca ataatcgact gcgcagcgta gcaaccgccg aaggtgaaag
     6901 cagcgggtcg ccgctttttg ccagcataac ggtgtcgagt accacgtttt ggatctgata
     6961 acgttgcaac cgttctgcca ccgcttcaac aatatcggtt tccgccaaca taccgatttt
     7021 agtggtgtcg attcgcacat cgctgaacac cgaatcgagc tgggcggcga caaaatcagg
     7081 ctcaatgcga tacaccgact gtacgccacg ggtattttgc gccaccagtg cagtaataac
     7141 tgagcaacca taagcgccaa gtgccgagaa ggttttaaga tcggcctgaa tccccgcacc
     7201 accactcgga tcagtaccgg caatcgtcag agcgttaatt cgtttcatgc ctgcacctcc
     7261 tgcgtcaatt gccagagcgc atcaaggaaa tgtggaacaa aactgcctgg cccctcgctt
     7321 ctggcgactg cgcgctctcc ggcttgtttc atccagtgac aggcagatgc gacattttcc
     7381 agcgtatcgc ctggtaacgc acagcaggca gcgacaaccg ccgataatgc acagccagtt
     7441 cctaccactt tggtcattaa cggatcgcca ccgtgaatgc caacggcgcg atggccatcg
     7501 gtaacataat ccacctcgcc agtgaccacg acgattgcgc cagtttcccg tgccagtgtt
     7561 tgtgcagcgg gtatcgcgtt agctgcggcg tcagtggtat ccactccccg tccaccatta
     7621 gcaatgccag ctaatgccat gatttccgaa gcattaccac gtatcgctgc cggtttaaaa
     7681 gataaaagtt catgacaaaa atggcggcga taatcgagcg caccaaccgc tactggatca
     7741 agcgtccagg gtgtttgaga gctttttgct tgctcaacgg cagcacgcat cgcctgagcg
     7801 cgtggctgcg tcagtgtgcc aacgttaatc aacaaggcac tggcgatagc cgcaaactga
     7861 ctggcctctt cggtttcgat aaccatcgct ggcgatgcac cgagcgccag caaggtattg
     7921 gcagtaaagg tttgcaccac atcgttggtc atgcagtgca caagagggga atgttggtga
     7981 aaaaggtgta acgcgtgcgc agattgcgct gaactcagca ggtcgacttg catagtttgc
     8041 tcctgccata acgtgaagaa gcaatgacct ggtggtccgt gacttcccta cgctggcatt
     8101 atccagatca ggtgatacgg gtatttctca gccttcacgc agaagggcac cccgagtcgt
     8161 ttggttgcga tgataaatcg cagaggagga tggtaatgtc cagcgcacgc gttgtaaacg
     8221 aggaaaaacg gcagttttac aatcgcgtta ataaattatt tgatatatga atccagcacc
     8281 ttcagaacga catccagatc ttcttcacgt tttagctcat ccccctggtg aacgatgtgt
     8341 tccgtcagat gacctttaat cacttcccgc atcagaccgt ttaccgcgcc acggatagca
     8401 gcaatctgtt gtaaaactgc agcgcattcg tgcggctcgt cgagcatttt cttgagcgcc
     8461 acgacctggc cctgaatctt actggcacgc gctttcagtt tctgtttatc acggattgta
     8521 tgagacatgg caacacctgg ttaacaagaa tatgaaaaat catagcacta ttaatctact
     8581 ggggggtagt atcaggtact gggggggagt agaatcagat tgccgaatta atactaagaa
     8641 ttattatcat gaccgaattt acaactcttc ttcagcaagg aaacgcctgg ttcttcatcc
     8701 ccagcgccat cttacttggt gcgcttcatg gcctggaacc agggcactca aaaacgatga
     8761 tggcggcgtt tatcatcgcc atcaaaggca ccattaaaca ggcggtgatg ctcggactgg
     8821 cagcaactat ttcgcatacc gcagtggtct ggttaattgc ctttggcggg atggtgatca
     8881 gcaagcgctt tactgctcaa tcagcagaac cgtggctcca gctgatttcc gcagtgatca
     8941 ttattggcac cgcgttctgg atgttctggc gtacctggcg cggcgaacgc aactggctgg
     9001 agaatatgca cgagtatgat catgaacatc atcaccacga tcacgaagat caccacgacc
     9061 atggacatca tcaccatcac gaacatggcg agtatcagga tgcccatgca cgagcccatg
     9121 ccaatgatat taaacgacgc tttgatggta gagaggtcac caactggcaa attttgttat
     9181 ttggcttaac aggtggtctt atcccctgtc cggcagcaat taccgtgctg ttgatttgca
     9241 ttcagttgaa agccctgaca ctgggcgcaa cactggtcgt cagtttcagc attggcctgg
     9301 cgttaacgct tgtcaccgta ggcgttggcg cagcaatcag cgttcagcag gtcgcaaaac
     9361 gctggagcgg atttaacact ctcgctaaac gcgcccccta tttttccagt ctgttgattg
     9421 gcttagtcgg tgtgtatatg ggcgtacatg gcttcatggg cataatgcga taactcaatc
     9481 ctttaggctt gcatgttatc ttcagcccag gatgattctt aaatcagcta tttccgctga
     9541 ctctctgctc gctaaggatg cttttagggc atcctttcat ttacactttt tacgaaatca
     9601 tgggatcact aacaaaatat cgcttgtcag ttatattgta tggcaggaaa gatatgcgac
     9661 tgatattaca gatccccaaa gtggagagtt tatgaccatt aaaaataaga tgttgctggg
     9721 tgtgcttttg ctggttacca gtgccgcctg ggccgcacca gccaccgcgg gttcgaccaa
     9781 tacctcggga atttctaagt atgagttaag tagtttcatt gctgacttta agcatttcaa
     9841 accaggtgat accgtcccag agatgtaccg caccgatgag tacaacatta agcagtggca
     9901 gttacgtaac ctgcccgcgc ctgatgccgg gacgcactgg acctatatgg gtggcgcgta
     9961 cgtgttgatc agcgacaccg acggtaaaat cattaaagcc tacgacggtg agatttttta
    10021 tcatcgctaa aaaaagcccc ctcatcatga gggggaaatg cagacacctt gttatttttt
    10081 attattagcc acttgctcgt cttgcttgtt attagtcgta tttcacgttg attaatgcgg
    10141 ttgcctccag tgcgccagat ttaactttgt ttgtatcgta gacgtagtaa ctggcagtta
    10201 tcggaattga aaccgttgta tctgtaagtt ttgactttgc cgcaatttct tttaaatttg
    10261 tgtatccttt actgctgtta gtgatattta aaagtgtgac tgacgaacca ttactttcaa
    10321 gaataaatcc tacgccatta tcttccgcac ctttcagtat tgtgttgctg ttggttaaca
    10381 agtcagaact tgataaatac acctgcattt tccgtgatgt ttgattttgt tgacctaata
    10441 aatttttaca acgcagaata atatcccctt gtttactatt tattgttgct ttgttacctg
    10501 tggctggtaa ttgtgaaacg ggaatactgt ctaaagtaat taataaatcg tccggtttgc
    10561 aggttgtggt tatcgggttg tatgacaatg tcagattaaa ggaatagaca cctgcatttt
    10621 gtgccaatgc atttctgtag ctatttacac atgcatccca tgacttgcca cctaataaac
    10681 acagtagaaa ttgtactgcg gcactcccgc gtgtcgatga tgaagcactg gataatgtcg
    10741 caactccatt aatcatcact gaaccgccgc cccccgcaga aacattcact tttgcattac
    10801 tggccgcagg tgtcaccgtt accgaataac cactggtgaa actggtctga ttatttgata
    10861 acgtgatgtt gtttttattg gtccattcaa aatgtaaatt taatttaatg gtatcgttat
    10921 aaagtccaac aataatatcc gacgggctca taggggtgat agtatttgta ctcacgcatg
    10981 acgaatcatt aaaattatgc tcatatgtcg ccatttgtgt ttgagtaagt gcaaaatccc
    11041 cctgaacaac caaattgtgc tgaacagata actcactata acatgccgca tagctcacag
    11101 gcataaccat catcattact ataaataaca ttatacgaat attcataacc acctgactat
    11161 tactggcaaa tatagtttct actttcatca atctctttac cgaaggtgat tgtgcatgaa
    11221 agtccttgtt gcttatcaat tgctacatta accgatggcg gtacttcatt ggtgcgaata
    11281 aataactggc ttccctgacc gacaacgcca atattatgac catggatatc attgacttca
    11341 taaccaaaca ttaatggttg cccatccgct cttaacgctt ttataaacca gggcttgcgc
    11401 tgatcggtat caaaattaac cagtacaacc gcgccgcgat aaggggcggc aattttccgg
    11461 ttgccacgta attctgcttc gctatcgctt tgcgacacat ccagcatcag gtgattttcc
    11521 cgataaggtg tcattccgtc gtataccacc actccattac ggtttgttgt gcgatatttt
    11581 tgcccattga cataagcatc tttaattcct ggcgcattca tcacagcaaa cgtttctgaa
    11641 agacggttcg ccagattaac gccccccgac caggcgacaa tgccccctga aacactggct
    11701 ccagcctgtc gataagtact cgactgacta taactgccat tcactgtcgc aaccggcgcg
    11761 ttccaggtca aattcgcccc agctgtcgtt tcatttccct gattctgata actcaggttg
    11821 accccatagt taaactgatc ccggcttcca acggttcctg ataatcccgt attatttgag
    11881 gcaaacccct gatcatcaaa cgtcgttgag ttagacatat atatttgccg acgaggcgtc
    11941 gtaacgtcat caccccaatc aaagggaatc gatataaaaa tattaaaacg tttctcttca
    12001 tgatgattct cgtcatacgc ctggcttgcc gcgaggatat agcttatccg ccgccagtta
    12061 ttggaataac tcaactgata atccttactg ctgccgctac gcccccagta atctcgccat
    12121 aacgtactta aggacacaga cccccagcct tctggcaatg actggctcat attggcagag
    12181 aagctatttt tacggccaaa atcgttctgg taataatcgg caatgtcata gacatcgttt
    12241 tcatcacggc gataattatc tttattgttt gcccaaacgt gatcattaaa tgtccggtaa
    12301 tcacgcgatg aataacgcca ggccgccaga ccaaaacgcg tcgacgtttg gctcacaaat
    12361 ttgttgtagg caatttgata actttgcccg tcaaacacat cgccgttgtc ttgtttacta
    12421 tgcgacttcg tggcatcgac ggaaatggca ccaatgcgtg tattccagcc agtccccaaa
    12481 gtaaacgcgt aataattatt cgcgaccatc gagccaccat acagcgtcaa taaattatta
    12541 aaaccatact gataacccgc ctggacaaaa tcactttgtt tgctcgcccc ttcaatatgg
    12601 ctacgacccg ccgcaaaatc atatttcgat acgccgggtt gcagcatatt tggcactgct
    12661 gcataaggca ccagataggt ggttaccgag ccgtccgcct ctttcacgct gacatcaaga
    12721 tctgctccac caccggccaa ctgcaaatct gtaatcgcga acgggccagg aggaacctct
    12781 ttctgataaa ccacaaaacc gttctgttca atagttacca gcgcattact ctgagcaatc
    12841 ccctgcaccc gtggcgtaaa attttgtttc gagttaggca acatctgcat atcacgaaac
    12901 aaccgcacac cgctgaagcg aacagaatca aaaatatcgc ttgatgtgta catatcaccc
    12961 acgcgaagcg tgccgagaag ttgggcaaat ccacgttcca gatacagggt attgcttttc
    13021 cacacccctg gattgttatt tgttttactg aaactggcat cagaatgcag ttgccacccc
    13081 agtaaattta acccgctgtt aaaacgtaca tatgtactct tactattacc cgacgcttta
    13141 tagtcactgt aatactgact cacataataa gaggtataaa acgcattaat accccgctcc
    13201 cagttttccg gtggaacata gccactttcc agttcttcca cccaggcctg cgggacactg
    13261 aaatcgagac gaaaaacccc gatatcccag gtatagctcc caccctgaac aagttgctca
    13321 aatgttaaac attgcttacc gctggcgaag ttatcgctat taatgcctaa ccgcttgata
    13381 acttctattg ataaacatgt ttcttgcggg ttgtctttaa caataatctc atatttcccg
    13441 cgccattgct tattgacata aatatcgatg tcatactgcc ccggtaaggg ttgattatca
    13501 tcaagacgaa tatttgcaac ctgctggtct ttcattccac ctatcataaa atgggtatca
    13561 aaggtttctt cagctgcata agcttcaatg ccgagcaata acgctacgat tgctgatgca
    13621 agtggggtca ttctcaacat aggcagctcc tgcaattaaa ttttgtcact aatatagttg
    13681 ccgtggtcat cgataatggt cagataccag ttatttgcat tattactttt gacattaaca
    13741 ctctgacttt ctaagggggc aatcataata gtttcataat tgactttaac attattagct
    13801 ttgacatccg aaatcgtcac ccaattagct gagtcatttt ttatcaccaa tccattgcca
    13861 ctgcgattta ccagtaactt tttaaaggtc gctttattta ccggagcaat acccgctggc
    13921 cggtaaaaca acttaattct gttttgcatc gcaaacttca gtgcattttt gccttcttgc
    13981 tctggactat ttggtggaat atccagaaca ttcagataaa aaatgctttc tttattagtg
    14041 ggcagtttat tcggcataat tttgattttt acttgctgcc cggaatttgc ccctattttt
    14101 gccactggtg gcgttaacat gaaaggaacc tgaatttttt ctggtggtaa cgacgtatcg
    14161 ccatcatcaa tccacgcctg cagcagcgaa gaacgatttc cctggttcat caactgcacc
    14221 ataacttctt tattttctgc cgggtaaata atgcgcgtcc cgtagataac aattccggca
    14281 tgtgcaggaa ggaccataga aaaaatgagt aaagataata atcctttcat cttaatgcct
    14341 cttaaattaa aaagccgcca tggggatagc ggccatgttt attacctgga gaaacttgca
    14401 attttattta ttaatcctgc gccacacgca taaccagaga agataacaca tcacctgatt
    14461 gcactgagtt atctgtcagt ttcaggtatt ttgctttaaa cggaatagca tattgacctt
    14521 ccgctgtttt ataactctca atgttaaaag gtgcagaaac atccaggaca tcgctgttat
    14581 cacctaaata gagatagtaa cccacggtat cgttgctact ggctatcgcc ttatcgttac
    14641 cggttatttt atcgttggta atcaacgaga gttttacacc agcaacttct ttcgggcagc
    14701 taatttttaa catgctgctg gttacaccga ctgcatcatc ataggtagaa tatttagctt
    14761 taccttcaaa gacagtggtt ggtacagtcg gcatattaat acttactgaa tcaccacccg
    14821 cttcgaattt acacggagat tctgccatat tccccttaat agttaatgtt ccggtatcaa
    14881 cgtctgcagc aaatactcca gcgctcataa aaaaagaaga aaagacagcg gcagcaata
//
LOCUS       DAPGWB010000110        14630 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.111, whole genome shotgun sequence.
ACCESSION   DAPGWB010000110 DAPGWB010000000
VERSION     DAPGWB010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14630
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.111"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..646
                     /locus_tag="RHX79_003226"
     CDS             <1..646
                     /locus_tag="RHX79_003226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
                     /protein_id="HDV2198367.1"
                     /translation="VAALCGLLALSGCASKITQPDKYSGFLNNYSDLKETTSATGKPV
                     LRWVDPSFDQSKYDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMKEAIAQRKP
                     LVTTAGPRSLIFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRLYFEG
                     ELIDAATNKPVIKVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK"
     gene            complement(664..1170)
                     /gene="tnpA"
                     /locus_tag="RHX79_003227"
                     /pseudo
     CDS             complement(664..1170)
                     /gene="tnpA"
                     /locus_tag="RHX79_003227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000604919.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            1178..2386
                     /locus_tag="RHX79_003228"
     CDS             1178..2386
                     /locus_tag="RHX79_003228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV2198368.1"
                     /translation="MKRLQAFKFQLRPGGQQEREMRRFAGACRFVFNRALARQNENHE
                     VGNKYIPYGKMASWLVEWKNATETQWLKDAPSQPLQQSLKDLERAYKNFFQNRAAFPR
                     FKKRGQNDVFRYPQGVKLDQENSRIFLPKLGWMRYRNSRQVTGVVKNVTVSQSCGKWY
                     ISIQTESEVSTPVHPSASMVGLDAGVAKLATLSDGTVFEPVNSFQKNQKTLARLQRQL
                     SRKVKFSNNWQKQKRKIQRLHSCIANIRRDYLHKVTTAVSKNHAMIVIEDLKVSNMSK
                     SAAGTVSQPGRNVRAKSGLNRSILDQGWYEMRRQLEYKQLWRGGQVLAVPPAYTSQRC
                     AYCGHTAKENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLACGEMVQSGRPLKQ
                     EPTEMIQATA"
     gene            complement(2426..3640)
                     /gene="ydcO"
                     /locus_tag="RHX79_003229"
     CDS             complement(2426..3640)
                     /gene="ydcO"
                     /locus_tag="RHX79_003229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BenE family transporter YdcO"
                     /protein_id="HDV2198369.1"
                     /translation="MLRCLYAITYEVTMRLFSIPPPTLLAGFLAVLIGYASSGAIIWQ
                     AAIVAGATTAQISGWMTALGLAMGVSTLTLTLWYRVPVLTAWSTPGAALLVTGLQGLT
                     LNEAIGVFIVTNALIVLCGITGLFARLMRIIPHSLAAAMLAGILLRFGLQAFASLDGQ
                     FTLCGSMLLVWLATKAVAPRYAVIAAMIIGIVIVIAQGDVVTTDVVFKPVLPTYITPD
                     FSFAHSLSVALPLFLVTMASQNAPGIAAMKAAGYSAPVSPLIVFTGLLALVFSPFGVY
                     SVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLIAGLFGSAITGMMAALPVSWIQ
                     MLAGLALLSTISGSLYQALHNERERDAAVVAFLVTASGLTLVGIGSAFWGLIAGGVCY
                     VVLNLIADRNRY"
     gene            3693..4229
                     /gene="sutR"
                     /locus_tag="RHX79_003230"
     CDS             3693..4229
                     /gene="sutR"
                     /locus_tag="RHX79_003230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SutR"
                     /protein_id="HDV2198370.1"
                     /translation="MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNE
                     SSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHF
                     SIQMAPGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR
                     NGGEQTVHFHSLIHYPRS"
     gene            4302..6263
                     /gene="rlhA"
                     /locus_tag="RHX79_003231"
     CDS             4302..6263
                     /gene="rlhA"
                     /locus_tag="RHX79_003231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA 5-hydroxycytidine C2501 synthase"
                     /protein_id="HDV2198371.1"
                     /translation="MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNA
                     SNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMG
                     ILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATI
                     EFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLS
                     MKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLTRAS
                     SGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLKVAKDHLDV
                     AVTEPLANGDGLNVMIKREVIGFRANTVEKTRENQYRVWPNEMPADLHKIRPHHPLNR
                     NLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNA
                     EKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASY
                     HRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPV
                     MITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKN
                     HILKMPLPGSVVASVSPDELLKTLPKRKG"
     gene            complement(6355..6585)
                     /locus_tag="RHX79_003232"
     CDS             complement(6355..6585)
                     /locus_tag="RHX79_003232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncJ family protein"
                     /protein_id="HDV2198372.1"
                     /translation="MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEAD
                     SDELRAVAEESAEGLREHFYWQKSRKPEAGQR"
     gene            6807..6961
                     /locus_tag="RHX79_003233"
                     /pseudo
     CDS             6807..6961
                     /locus_tag="RHX79_003233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415954.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mRNA interferase"
     gene            7007..7423
                     /gene="hicB"
                     /locus_tag="RHX79_003234"
     CDS             7007..7423
                     /gene="hicB"
                     /locus_tag="RHX79_003234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415955.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HicB"
                     /protein_id="HDV2198373.1"
                     /translation="MRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALL
                     TAFDFYFEDNELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGK
                     PKQEITRLFNLHHATKIDAVQLAAKALGKELSLVMV"
     gene            7502..8908
                     /locus_tag="RHX79_003235"
     CDS             7502..8908
                     /locus_tag="RHX79_003235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDV2198374.1"
                     /translation="MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVS
                     HAYQLLESLGYIIARPQSGYYVAPQAIKMPKAPVIPVTRDEAVDINTYIFDMLQASRD
                     PSVVPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAELRQAIARRYAL
                     QGITISPDEIVITAGALEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSV
                     ATDVKEGIDLQALELALQDYPVKACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTL
                     IEDDVYSELYFGREKPLPAKAWDRHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQR
                     LQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQRAWQALLRYLPAEVKI
                     HHSDSGYFLWLELPEPLDAGELSLAALTHHISIAPGKMFSTGENWSRFFRFNTAWQWG
                     EREEQAVKQLGKLIQERL"
     gene            9153..10298
                     /locus_tag="RHX79_003236"
     CDS             9153..10298
                     /locus_tag="RHX79_003236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV2198375.1"
                     /translation="MSKTFARSSLCALSMTIMTAHAAEPPTNLDKPEGRLDIIAWPGY
                     IERGQTDKQYDWVTQFEKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLI
                     MGKRVQPINTALIPNWKTLDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPP
                     DSWQVVFVEQNLPDGKSNKGRVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQY
                     QAVLKVLRDQHSLIHRYWHDTTVQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFP
                     KEGVTGWADTTMLHSEAKHPVCAYKWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPL
                     LGEKGCETNGFNYFDKIAFWKTPIAEGGKFVPYSRWTQDYIAIMGGR"
     gene            10316..11329
                     /locus_tag="RHX79_003237"
     CDS             10316..11329
                     /locus_tag="RHX79_003237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV2198376.1"
                     /translation="MTYAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKT
                     TCLRLIAGFEQLSGGAISIFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLM
                     VKGVNKKQRHAMAQEALEKVALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDE
                     PLGALDLKLREQMQLELKKLQQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDS
                     PRDLYMRPRTPFVAGFVGTSNVFDGLMAEKLCGMTGSFALRPEHIRLNTPGELQANGT
                     IQAVQYQGAATRFELKLNGGEKLLVSQANMTGEELPATLTPGQQVMVSWSRDVMVPLV
                     EER"
     gene            11330..12271
                     /locus_tag="RHX79_003238"
     CDS             11330..12271
                     /locus_tag="RHX79_003238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2198377.1"
                     /translation="MAMNVLQSPSRPGLGKVSGFFWRNPGLGLFLLLLGPLMWFGIVY
                     FGSLLTLLWQGFYTFDDFTMSVTPELTLANIRALFNPANYDIILRTLTMAVAVTIASA
                     ILAFPMAWYMARYTSGKMKAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHL
                     GLEPLLTAFLTLPAVGGNTLSTSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQAS
                     ADLGARPRQTFRYVVLPLAIPGIAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQ
                     QGAIGNMPMAAAFTLVPIVLIALYLAFVKRLGAFDAL"
     gene            12261..13055
                     /locus_tag="RHX79_003239"
     CDS             12261..13055
                     /locus_tag="RHX79_003239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2198378.1"
                     /translation="MHSERAPFFLKLAAWGGVVFLHFPILIIAAYAFNTEDAAFSFPP
                     QGLTLRWFSVAAQRSDILDAVTLSLKVAALATLMALVLGTLAAAALWRRDFFGKNAIS
                     LLLLLPIALPGIVTGLALLTAFKTINLEPGFFTIVVGHATFCVVVVFNNVIARFRRTS
                     WSLVEASMDLGANGWQTFRYVVLPNLSSALLAGGMLAFALSFDEIIVTTFTAGHERTL
                     PLWLLNQLGRPRDVPVTNVVALLVMLVTTLPILGAWWLTREGDNGQ"
     gene            13077..14501
                     /gene="patD"
                     /locus_tag="RHX79_003240"
     CDS             13077..14501
                     /gene="patD"
                     /locus_tag="RHX79_003240"
                     /EC_number="1.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminobutyraldehyde dehydrogenase"
                     /protein_id="HDV2198379.1"
                     /translation="MQHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAA
                     VRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIP
                     AIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA
                     PALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVINVLFGRGKTVGDPLTGHPKVR
                     MVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNA
                     GQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVSKA
                     VEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE
                     EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLS
                     GYGKDMSLYGLEDYTVVRHVMVKH"
BASE COUNT         3611 a         3568 c         3882 g         3569 t
ORIGIN      
        1 agttgcagct ttatgcggct tgttggctct gtctggttgt gcctctaaaa tcacccagcc
       61 agataaatat tctggttttt taaacaatta ctctgattta aaagaaacaa cctcagcaac
      121 aggtaaacct gttttacgtt gggtagaccc gagttttgat caaagcaaat atgacagcat
      181 cgtctggaac ccaatcactt attatccggt gccaaaacct tctacccagg tagggcagaa
      241 agttctggat aaaattttga actataccaa caccgaaatg aaagaagcga tagcgcagcg
      301 taaaccactg gttaccaccg ctgggccgcg tagtctgatt ttccgtgggg ccattaccgg
      361 tgtagatacc agcaaagaag ggctgcaatt ctatgaagtg gttcctgttg cattagtggt
      421 tgcggggacg caaatggcta caggccaccg taccatggat actcgcctct attttgaagg
      481 tgagctgatt gatgcagcga ctaataaacc ggttatcaaa gtcgttcgtc agggcgaagg
      541 taaagacctg aataacgaaa gtacgccaat ggctttcgaa aatattaaac aagttattga
      601 tgacatggcg accgatgcca ccatgtttga cgttaacaaa aagtagttcc agacgcgcca
      661 tcgttagatg gcgcttttta tccggtgcgc cgtaaaaccc catccttcag ggcggggata
      721 taaggcgcgg ttttccacct gaccaggtgt ttgctgttgt tcaatgtatt ggcggatgac
      781 ggatattggc gcacctccgc agctactggc aaaatagcca ggactccaca aaacgccttt
      841 gtagtaatac ctgactgcaa tatctggtcg atctcgtcgc agtcacctac ccgatacgcc
      901 tttgaggctg tttaccagac tggatatcgc cagtttggga ggatagttaa ttaacaaatg
      961 gacgtgatct ggttcgccat ccatttcaac cagttcagct tcaaaatcag cacatacatt
     1021 tgaaaagtaa gtgcgtagtt tttctgtcgc gtcatggtca aaaatctgac gtcggtattt
     1081 ggtgacaaag accaggtgaa catgcatcag gaaaacacaa tgccttccac gccggatatc
     1141 ggtttctttt ttcacagacc aaagtatcat ttggcctgtg aaacgattac aggcatttaa
     1201 attccagtta agacccggtg gtcaacagga gcgtgaaatg aggcgcttcg caggcgcatg
     1261 tcgtttcgtt ttcaatcgtg ctctggcacg tcagaatgag aatcatgagg tcggtaataa
     1321 atacatccct tacgggaaaa tggcttcctg gctggttgag tggaaaaatg ccactgaaac
     1381 gcaatggctt aaagatgccc cgtcacagcc attgcaacag tcactgaaag accttgagcg
     1441 ggcttacaaa aacttcttcc agaatcgggc tgcttttccc cgattcaaaa agcggggaca
     1501 gaatgatgta ttccgctacc cgcagggcgt taagctcgat caggaaaaca gccgtatttt
     1561 tctgccgaaa ctgggctgga tgcgctaccg gaacagccgt caggtcacgg gtgttgtgaa
     1621 aaatgtcact gtcagccagt cctgcggtaa gtggtacatc agtattcaga cagaaagtga
     1681 agtatccact ccggttcacc cttcagcatc aatggtcggg ctggatgctg gcgtggctaa
     1741 actcgccacg ctgtcagatg gcacagtctt tgagcctgta aacagttttc agaaaaacca
     1801 gaagacgctg gcgagacttc agcgacagtt aagccgcaag gtcaaattca gcaacaactg
     1861 gcagaagcag aaacgcaaaa tacagcgact gcattcctgt atcgcaaata tccgcaggga
     1921 ctaccttcac aaagtcacaa cggccgtcag caaaaaccac gcaatgatag tcattgagga
     1981 tttgaaggtc agcaacatgt caaagtcagc agcgggtacg gtcagccagc cggggcgcaa
     2041 tgtccgggca aaatcaggtt taaaccgttc gatactggat cagggctggt atgaaatgcg
     2101 ccgccagctt gagtacaagc agctctggcg tggcggtcag gtgcttgctg ttccgccagc
     2161 gtatacaagc cagcgttgcg cgtactgtgg tcatacagcg aaagagaacc gcctgtcaca
     2221 aagtaaattc agatgccagg tatgtggata tacagcgaac gccgatgtaa atggcgctcg
     2281 taacatttta gcggcggggc acgccgttct tgcctgtgga gagatggtgc agtcaggccg
     2341 cccgttgaag caggaaccca ccgaaatgat tcaggcgaca gcctgaacgt agcagggatc
     2401 cacgtccttc agggcgtgga ggatgtcaat atcggtttct gtcagcgatt aaattcaaca
     2461 ccacgtaaca aacgcctccg gcaattaatc cccagaacgc agaaccaatc ccgaccagcg
     2521 tcaatccact tgccgttacc agaaatgcca ccaccgccgc gtctcgctca cgctcattat
     2581 gcagcgcctg atacaaactg ccgctaatgg tacttaacag cgccagacct gccagcatct
     2641 ggatccaact tacgggcagg gcagccatca tcccggtaat agcactacca aacagacctg
     2701 cgatcaaata aaaaatgcct gcaacggcag ctgccagcca acgttgatct ttatccggat
     2761 gcgcttccgg gctttggcaa atagccgcgg tgattgccgc aataccgacg gaataaacgc
     2821 cgaaagggga aaaaaccagt gccagcaatc cagtaaatac aattaatggc gaaacaggag
     2881 ccgaataccc ggctgctttc attgctgcga tacccggtgc gttttgcgat gccatcgtca
     2941 ccagaaaaag ggggagtgca acgctcaggc tgtgagcaaa cgaaaaatca ggggtaatat
     3001 aagtggggag aacgggttta aagacaacat cagttgtgac aacgtcacct tgcgcgataa
     3061 cgatcacgat cccaataatc atcgcggcaa ttaccgcata gcgcggcgca acggccttgg
     3121 ttgccagcca taccagcaac atacttccac acaacgtaaa ttgaccgtcc agactggcaa
     3181 acgcctgtaa accaaagcgt aataaaatcc cggcaagcat tgccgccgca agcgagtgcg
     3241 gaataatgcg catcagacga gcaaagagtc ccgttatgcc gcagaggact attaacgcgt
     3301 tggtgacaat aaaaacgccg atggcttcgt taagtgttag tccctgcaat ccggtgacca
     3361 acaaagccgc gccaggcgtt gaccatgcgg tgagaacagg tacgcgatac cataatgtca
     3421 gagtcagcgt actgacgccc attgccagcc ccagcgccgt catccagcca gagatttgtg
     3481 cagtggtggc tccggcgaca atcgctgctt gccagattat tgcccctgaa ctggcgtagc
     3541 caattaatac cgccagaaac cccgccagta gcgtgggtgg aggaatagaa aacagacgca
     3601 tagtcacctc gtacgttata gcgtacaggc accgtagcat ttgtccgtta taacgcacaa
     3661 gtgataaact tccgttttgc cggaggagtc gcatggaaaa tctcgctcgc tttttatcca
     3721 ccacacttaa acaactacgc cagcagcgcg gctggagtct ttcgcgactg gcagaagcga
     3781 cgggcgtttc taaagcaatg ttagggcaga ttgagcgtaa tgagtccagc ccgacggtcg
     3841 cgacattatg gaaaattgcc accgggttga atgtgccatt ttcgacattt atttctccgc
     3901 cgcagtccgc tacgccttca gtttatgatc cacaacagca ggcgatggtg atcacttcgc
     3961 tgtttcctta tgatccacaa ctctgctttg aacacttctc gattcagatg gcacccggtg
     4021 caataagcga atcgacgccc catgagaagg gggtaatcga acatgtcgtc gtcattgatg
     4081 gacaacttga tctgtgcgtt gatggggaat ggcagaccct taattgtggg gaaggcgttc
     4141 gatttgctgc agacgtcacg catatctatc gtaatggtgg ggagcaaacc gtacattttc
     4201 attccctcat ccattacccg cgcagttaag cgggaaaact atttcgcaac gtcgcgcttg
     4261 tggctaaaat agccgccatt tttcagctac tggataagaa tgtgaccgta tcttctcatc
     4321 gacttgaact gttaagcccg gcacgcgatg ccgccattgc ccgcgaagct attttgcacg
     4381 gtgccgatgc tgtttatatc ggcggccctg gttttggtgc ccgtcataat gccagtaata
     4441 gcctgaaaga tattgccgag ctggtgccgt ttgcccatcg ttatggtgca aaaattttcg
     4501 tcacgcttaa caccattttg catgatgatg agctggaacc cgcgcaacgg ctgattactg
     4561 acctctacca gaccggtgtc gatgcgctga ttgttcagga tatggggatt ctggaacttg
     4621 atattccgcc gattgaactg cacgccagta cgcagtgcga cattcgtaca gttgaaaaag
     4681 cgaagttcct ctctgatgtt ggcttcacgc agattgtgct ggcgcgagag ctgaatcttg
     4741 atcagatccg cgcgattcac caggctacgg acgcgaccat tgaattcttt attcatgggg
     4801 cactgtgcgt ggcctattcg ggtcagtgct acatttctca tgcgcaaaca gggcgtagcg
     4861 ccaaccgtgg cgattgctcg caggcgtgcc gtttgccata cacattgaaa gacgatcagg
     4921 ggcgggtggt ttcctatgaa aaacatctgc tgtcgatgaa agataacgat cagacagcca
     4981 acctcggcgc gctgattgat gctggcgtac gctccttcaa gattgaaggg cgttacaaag
     5041 atatgagcta cgtgaagaat atcaccgccc attatcgcca gatgctggat gccattattg
     5101 aagaacgtgg cgatctgacg cgtgcttcat caggtcgtac tgaacatttc tttgttccat
     5161 cgacggaaaa gactttccac cgtggtagca cagattattt tgtgaatgcc cgtaaaggcg
     5221 atattggcgc gttcgattcg ccgaaattta tcggcctgcc ggtgggtgaa gtattgaaag
     5281 tggcgaaaga tcatctcgat gttgccgtca ccgagccact ggcaaatggt gatggcctga
     5341 acgtgatgat taaacgtgaa gtcatcggtt ttcgtgccaa tacggtcgag aaaaccagag
     5401 aaaatcagta ccgcgtctgg cccaatgaaa tgccagcaga tttgcacaaa attcgtccac
     5461 atcacccact aaaccgtaat cttgatcata actggcagca ggcactgaca aaaacctcca
     5521 gcgaacgtcg ggtggcggta gacattgaat tgggcggctg gcaggaacaa ctgattctga
     5581 ccctcaccag tgaagagggt gtcagcatca cgcatacgct ggacgggcag ttcgacgaag
     5641 ccaataacgc cgaaaaagca atgaacaatc tgaaggatgg tctggcaaaa ctggggcaaa
     5701 ccctctatta cgcccgcgat gtgcaaatta atttgccggg ggcgctgttt gtaccaaaca
     5761 gtctgttaaa ccagttccgc cgtgaagctg ctgacatgct ggatgctgcg cgtcttgcca
     5821 gttaccatcg cggcagccgt aaaccggttg ctgatcctgc gccggtttat ccgcaaacgc
     5881 atctgagttt cctcgcgaac gtatacaacc agaaagcgcg tgaattttat catcgctatg
     5941 gtgtgcagct gattgacgcg gcgtatgaag cacatgaaga gaagggcgaa gtcccggtga
     6001 tgatcaccaa gcattgtctg cgctttgcct ttaatctgtg cccgaaacag gcgaaaggca
     6061 atatcaaaag ctggaaggcg acgccaatgc aactggttaa cggcgatgaa gtattaacgc
     6121 taaagtttga ttgccgccca tgcgagatgc acgtcattgg caaaatcaaa aatcacatac
     6181 tgaaaatgcc gttaccggga agcgtagtgg catccgtaag tccggatgag ctgctgaaaa
     6241 cattgcctaa gcgaaaaggg taaaacgcca gttttctggt tactcacaac tcattgaatc
     6301 tgcatgatat tgcctgccgg gtaaggcgtc tcgccgcatc cggcaacaaa tgactcaacg
     6361 ttgtcccgct tctggtttgc gcgatttttg ccagtaaaaa tgctcgcgca aaccttccgc
     6421 cgactcttcc gccacagcac gcaattcatc gctgtccgct tcatgacgca gctgatgatc
     6481 cacattcttt acccacacaa attcatgtcc tttgtgccct gccatgagtt gtcctgagaa
     6541 cagcgcacac gttaataaga caaccgataa cgccttcgta aacatcctgc cacctttttc
     6601 ttaccttttg ccgctatgat gccgatcgtt tcttgaggtt attattcagt tttgcaaatt
     6661 agcgcaaaga aattctggaa tcttccttcc tgattttgca tggcattctg ccgttgcggc
     6721 gatttagtgc tattttcgag caaattacac acggaggtaa acactaatgt ttactttgtt
     6781 gatatactca gcggcaggga ggcgatgtga aacaaagcga gttcagacgt tggctcgaat
     6841 ctcagggcgt cgatgtagcg aatggcagca accatttgaa actcaggttt catgggaggc
     6901 gcagtgtcat gccgcgtcac ccctgcgtaa agcaatcctg aaacaactcg gtttgagtta
     6961 atcgccaatt aaaaaggtta atgacatgcg agagacagtc gaaattatgc gttatcccgt
     7021 cactcttaca cccgcgccgg aaggcggtta tatggtttct tttgtggata tccctgaagc
     7081 gttgacgcag ggcgaaactg tcgctgaagc gatggaagcg gcaaaagatg ctttactgac
     7141 cgcatttgat ttttattttg aagataacga gcttatcccg ttaccttcgc cattaaatag
     7201 tcatgatcac tttattgaag tacctttgag cgtcgcctct aaagtattgc tgttaaatgc
     7261 ttttttacag tcagaaatca ctcagcaaga gttagccagg cgaattggca aacctaaaca
     7321 ggagattact cgcctattta acttgcacca tgcgacaaaa atcgacgccg tccagcttgc
     7381 ggcaaaggcg cttggcaaag agttatcgct ggtgatggtt taattacagt taacgaaaag
     7441 ttgtcatttt taacaactga tatagactgc cgaatcatct gcacataatt acgattcgat
     7501 aatgaaaaaa taccagcagc ttgcagaaca attacgcgag cagattgcgt cgggtatctg
     7561 gcaacccggc gatcgtttgc cttcgttgcg tgaccaggtg gcgctttctg gcatgagctt
     7621 tatgactgtc agccatgcct atcagttgct cgaaagtctg ggatatatta tcgcgcgacc
     7681 gcagtcgggt tattacgttg cgccacaggc aataaaaatg ccgaaagcgc cagtcattcc
     7741 agtcactcga gatgaagcag tcgatatcaa cacttatatt tttgatatgt tgcaggccag
     7801 tcgcgatccg tcggtcgttc cgtttgcctc ggcctttccc gacccgcgac ttttccccct
     7861 ccaacaacta aaccgctcgc tggcgcaggt aagcaaaacc gccacagcga tgagcgtgat
     7921 tgaaaactta ccgccaggaa acgcagaact gcgtcaggct attgctcgtc gctatgcctt
     7981 acagggcatc accatttctc ctgatgaaat tgtcattact gccggggcgt tagaggcatt
     8041 aaacctcagt ttgcaagcgg taactgaacc gggcgattgg gtgatagtag agaatccttg
     8101 tttctacggt gcgttgcagg cgctggagcg gctacggctg aaggcgttat cggtggcgac
     8161 ggatgttaaa gaagggatcg atcttcaggc gctggaactg gcgttgcagg attatccggt
     8221 gaaagcgtgc tggctgatga ctaatagcca gaacccactc ggatttacct taacgccgca
     8281 aaaaaaagca caactggtgg cgttactcaa tcagtacaac gtaacgctga ttgaagatga
     8341 cgtttacagc gaactttatt ttggacggga aaaaccgctg cctgcgaaag cgtgggatcg
     8401 ccacgatggc gttttgcatt gctcttcgtt ttcgaaatgt ctggtgcctg gttttcgtat
     8461 tggttgggtc gccgccggaa aacatgcacg taaaattcaa cgcttgcagt tgatgagtac
     8521 gctttccacc agctcaccga tgcaacttgc gctggtggat tacctttcca cgcgccgata
     8581 cgacgcccat cttcgtcgcc tgcgtcgcca gcttgcggaa cgtaaacaac gtgcctggca
     8641 ggcactgctg cgttatctgc ctgcggaagt taaaattcat catagtgaca gcggttattt
     8701 tctctggctg gagctccccg agccgttaga tgccggcgaa ttaagcctgg cggcactgac
     8761 gcatcatatc agtattgcgc cgggtaaaat gttttctacc ggtgaaaact ggtcacgttt
     8821 ttttcgtttt aataccgcgt ggcagtgggg agaacgtgaa gaacaggcgg taaaacaatt
     8881 aggcaaactt attcaagaac ggctgtaata gcgtttaatt taattcctct tagattgggt
     8941 aatatgaatt tcgaatagca gtcatatttc ctaacccctt gtctatactc cagaagataa
     9001 ccttacagac ggcataatgc gcggtagctc acaacctgat taaattttct caggggcgaa
     9061 ggtgtgcctg ctagccgccg tctatggtta aacaaggaga tatttttacg gcacggcggc
     9121 tgaacaatta attacgacag gagtaagact ttatgagcaa gacatttgcc cgcagcagcc
     9181 tgtgtgcgct cagcatgaca ataatgaccg ctcacgccgc cgaaccacct accaatttag
     9241 ataaaccgga agggcgactg gatattatcg cctggccggg atacatcgaa cgcggacaaa
     9301 ctgataaaca atacgactgg gtaacgcaat tcgaaaaaga gacaggctgc gcggtgaatg
     9361 tgaaaaccgc cgcgacttcc gatgaaatgg tcagtctgat gaccaaaggg ggttacgatc
     9421 tggttacggc atccggcgat gcctcgctgc gtttgattat gggaaaacgc gtgcagccga
     9481 ttaataccgc cttgattccc aactggaaaa cgctcgatcc gcgcgtggtt aaaggcgact
     9541 ggtttaacgt tggcggcaaa gtttacggca caccttacca atgggggccg aacctgctga
     9601 tgtacaacac taaaaccttc ccgacgccgc cggatagctg gcaagtggtt tttgttgagc
     9661 agaatctgcc ggacggcaag agcaataaag gccgcgtcca ggcttatgat ggccctatct
     9721 acattgcgga cgctgcgttg ttcgttaaag ccactcagcc gcagttgggc atcagcgatc
     9781 cgtatcaact caccgaagaa cagtaccagg cggtgctgaa agtgctgcgc gatcaacata
     9841 gtttgatcca tcgctactgg catgacacta ccgtgcaaat gagcgatttc aaaaacgagg
     9901 gtgtggttgc ttccagtgcc tggccctatc aggccaacgc cctgaaagcc gaaggccagc
     9961 ctgttgctac cgttttcccg aaggagggtg ttaccggttg ggctgatacc accatgctgc
    10021 atagcgaagc gaaacatccg gtttgcgcct acaaatggat gaactggtca ttaacgccaa
    10081 aagtgcaggg cgatgtggcg gcctggtttg gctcgttacc ggtagtgccg gaagggtgta
    10141 aagccagtcc gttattaggc gaaaaaggtt gtgaaaccaa cggttttaac tatttcgaca
    10201 aaatcgcctt ctggaaaacg cctatagcag aagggggcaa gtttgttccc tacagtcgct
    10261 ggacgcagga ttacattgcc attatgggcg gtcgctaact tcgctggggt gctttatgac
    10321 gtacgcagtg gagtttgaca acgtctcgcg gttgtacggt gacgtgcgcg cagtagatgg
    10381 cgtcagtatt gcgataaaag atggtgagtt cttctctatg ctggggccgt ccggctccgg
    10441 caaaaccacc tgcctgcgcc tgattgctgg cttcgaacag ctttccggcg gggctatctc
    10501 tatctttggt aaacccgcca gcaatctgcc accgtgggag cgggacgtga atactgtctt
    10561 tcaggactac gcgctatttc cgcatatgtc gattcttgac aatgtcgcct atgggctgat
    10621 ggtcaaaggc gtgaataaaa agcagcggca cgcaatggcg caagaggcgc tggagaaagt
    10681 ggcgttgggg tttgtacatc aacgtaaacc gtcacaactt tctggtggtc agcgccagcg
    10741 ggttgctatc gccagagcat tggtgaatga accgcgcgta ttgctgttgg atgaaccgct
    10801 cggcgcactg gatctcaaat tgcgtgagca gatgcagctg gaactgaaaa aactgcaaca
    10861 gtctctcggt atcactttta tcttcgttac ccacgatcag ggcgaagcgt tatcgatgtc
    10921 cgatcgtgtg gcggttttca ataatggacg cattgagcag gtcgattccc cgcgcgatct
    10981 ctatatgcgc ccgcgcacgc cgtttgttgc cggattcgtc gggacatcca acgtttttga
    11041 tggactgatg gcagagaaac tttgtggcat gacgggaagc ttcgccctgc gaccggaaca
    11101 tatccgcctc aacacccctg gtgaactgca ggccaatggc acgatccagg cggtgcaata
    11161 tcagggcgcg gcaactcgtt ttgaactgaa attgaacggc ggtgaaaaac tgcttgtgag
    11221 tcaggccaat atgacaggcg aagaactgcc tgccacgctc acgcccggac aacaggtgat
    11281 ggtttcctgg tcgcgtgatg tgatggtgcc gctggttgag gagaggtgaa tggcgatgaa
    11341 tgtattgcaa tcaccttcac gtccaggtct gggtaaggtg tccggtttct tctggcgtaa
    11401 tccggggctg gggctgtttt tactgctgct tggcccgcta atgtggtttg gcattgtcta
    11461 tttcggctcg ctgctgacac tgttatggca gggattttat acttttgacg atttcaccat
    11521 gtcggtaacg ccggaactga cgctggcgaa tatccgtgcg ctgtttaatc cggcgaatta
    11581 cgacatcatt ctccgcacgc tgactatggc tgtggcagtc actatcgcca gcgccattct
    11641 ggcttttcca atggcgtggt atatggcgcg ctataccagc gggaaaatga aagctttttt
    11701 ttatattgcg gtaatgttgc cgatgtgggc gagctacatt gttaaagcct atgcctggac
    11761 gttattgctg gcaaaagatg gcgtggctca gtggttttta caacatcttg ggctggaacc
    11821 actgctgact gcgttcctta cattacctgc ggtgggcgga aatacgctgt caacttccgg
    11881 gctggggcgc tttctggtgt ttctctatat ctggttgccg ttcatgatcc tgcccgttca
    11941 ggcggcgctt gagcgtttgc cgccgtcatt gttgcaggcg tcggctgatc tcggcgcacg
    12001 tccacgacaa acctttcgct atgtggtgct gccgctggca atcccgggta ttgccgctgg
    12061 ctctatcttt accttctcac tcacactggg cgattttatc gtcccgcagc tggttggtcc
    12121 tccaggatat tttatcggca atatggttta ttcccagcag ggggcgattg gcaatatgcc
    12181 gatggcggcg gcattcaccc tggtgccgat tgttctcatc gcactgtacc tggcgttcgt
    12241 gaaacgtctg ggagcgttcg atgcactctg aacgcgcacc gtttttcctc aaactggcgg
    12301 cctggggcgg cgtggttttc ctacattttc ccatcctgat tatcgccgct tatgcgttta
    12361 acactgaaga tgcggcgttt agttttccac cgcagggcct gacgctgcgc tggtttagcg
    12421 tggcagcaca gcgtagtgat attcttgatg ccgtgacact gtcacttaaa gtggcggcgc
    12481 tggcgacatt aatggcgctg gtgttaggga cgctggcagc tgccgcgctg tggcgacgag
    12541 actttttcgg caaaaacgcc atttcgctgt tactgctgct gcccattgcg ctgccgggca
    12601 ttgtcactgg tctggcgcta ttaaccgctt ttaaaaccat caatctggag ccgggatttt
    12661 tcaccatcgt ggtcggtcat gcgacttttt gcgtagtggt ggtgtttaac aatgtcatcg
    12721 cccgttttcg ccgcacctcg tggagtctgg ttgaggcgtc aatggatctt ggggccaatg
    12781 gctggcaaac cttccgctac gtagtgttgc cgaatctcag ttcggcgcta ctggcaggag
    12841 gaatgctggc gtttgccttg tcgttcgatg aaatcatcgt tacgactttt acggcaggtc
    12901 atgaacgaac gttaccgttg tggttgctca atcagcttgg gcgaccgcgt gatgtaccgg
    12961 taactaacgt ggtggcactg ctggttatgt tggtaacaac cttgccgatc ctgggggcct
    13021 ggtggctaac ccgcgaaggc gacaatggtc aataaccact gatacaggaa tatgctatgc
    13081 aacataagtt actgattaac ggagaactgg ttagcggcga aggggaaaaa cagcctgtct
    13141 ataatccggc aacgggggac gttttactgg agattgccga ggcatccgca gagcaggtcg
    13201 atgctgctgt gcgcgcggca gatgcagcat ttgccgaatg ggggcaaacc acgccgaaag
    13261 tgcgtgcgga atgtctgctg aaactggctg atgttatcga agaaaatggt caggtttttg
    13321 ccgaactgga gtcccgtaat tgtggcaaac cgctgcatag tgcgttcaat gatgaaatcc
    13381 cggcgattgt cgatgttttt cgctttttcg cgggtgcggc gcgctgtctg aatggtctgg
    13441 cggcaggtga atatcttgaa ggtcatactt cgatgatccg tcgcgatccg ttgggggtcg
    13501 tggcttctat cgcaccgtgg aattatccgc tgatgatggc agcgtggaaa ctggctccgg
    13561 cgctggcggc agggaactgc gtagtgctta aaccatcaga aattaccccg ctgaccgcgt
    13621 tgaagttggc agagctggcg aaagatatct tcccagcagg cgtgattaac gtactgtttg
    13681 gcagaggcaa aacggtgggt gatccgctga ccggtcatcc caaagtgcgg atggtgtcgc
    13741 tgacgggctc tatcgccacc ggcgagcaca tcatcagcca taccgcgtcg tccattaagc
    13801 gtactcatat ggaacttggt ggcaaagcgc cagtgattgt ttttgatgat gcggatattg
    13861 aagcagtggt cgaaggtgta cgtacatttg gctattacaa tgctggacag gattgtactg
    13921 cggcttgtcg gatctacgcg caaaaaggca tttacgatac gctggtggaa aaactgggtg
    13981 ctgcggtggc aacgttaaaa tctggtgcgc cggatgacga gtctacggag cttggacctt
    14041 taagctcgct ggcgcatctc gaacgcgtca gcaaggcagt agaagaggcg aaagcgacag
    14101 ggcacatcaa agtgatcact ggcggtgaaa agcgcaaggg taatggctat tactatgcgc
    14161 cgacgctgct ggctggcgca ttacaggacg atgccatcgt gcaaaaagag gtatttggtc
    14221 cagtagtgag tgttacgccc ttcgacaacg aagaacaggt ggtgaactgg gcgaatgaca
    14281 gccagtacgg acttgcatct tcggtatgga cgaaagatgt gggcagggcg catcgcgtca
    14341 gcgcacggct gcaatatggt tgtacctggg tcaataccca tttcatgctg gtaagtgaaa
    14401 tgccgcacgg tgggcagaaa ctttctggtt acggcaagga tatgtcactt tatgggctgg
    14461 aggattacac cgtcgtccgc cacgtcatgg ttaaacatta agttagatgt tagtggctgt
    14521 tataggacgg ccactatcgt tttaggttct gagtttaatg gcggttaagt attagaatga
    14581 ttacattaat aactagcgta aaaattaggc taaatgtttg atggcgattt
//
LOCUS       DAPGWB010000111        14494 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.112, whole genome shotgun sequence.
ACCESSION   DAPGWB010000111 DAPGWB010000000
VERSION     DAPGWB010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14494
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.112"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(145..1134)
                     /locus_tag="RHX79_003241"
     CDS             complement(145..1134)
                     /locus_tag="RHX79_003241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003132006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3330 domain-containing protein"
                     /protein_id="HDV2198380.1"
                     /translation="MSASQPIEWTVAQLAQAVERGQLELHYQPIVDLRSEQIVGAEAL
                     LRWRHPTLGLLPPGQFLPVIESSGLMPEIGAWVLGAACRQMRDWRVLAWQPFRLAVNV
                     SASQVGPDFDKWVKGVLADAGLPAAYLEIELTESVAFGDPAIFPALEALRQIGVRFAA
                     DDFGTGYSCLQHLKCCPISTLKIDQSFVAGLANDHRDQTIVRTVIQLAHGLGMEVVAE
                     GVETSASLDLLRQADCDTGQGFLFAKPMPAAAFAVFVSQWRGATMNANDPTATSCCVC
                     CKEIPLDAAFTPEGAEYVEHFCGLECYQRFQARAKTGSETDADPNACDSSLSD"
     gene            complement(1131..1367)
                     /gene="merE"
                     /locus_tag="RHX79_003242"
     CDS             complement(1131..1367)
                     /gene="merE"
                     /locus_tag="RHX79_003242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="broad-spectrum mercury transporter MerE"
                     /protein_id="HDV2198381.1"
                     /translation="MNSPERMPAETHKPFTGYLWGALAVLTCPCHLPILAIVLAGTTA
                     GAFIGEHWGIAALTLTGLFVLSVTRLLRAFRGRS"
     gene            complement(1364..1729)
                     /gene="merD"
                     /locus_tag="RHX79_003243"
     CDS             complement(1364..1729)
                     /gene="merD"
                     /locus_tag="RHX79_003243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001277466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance co-regulator MerD"
                     /protein_id="HDV2198382.1"
                     /translation="MNAYTVSRLALDAGVSVHIVRDYLLRGLLRPVACTTGGYGLFDD
                     AALQRLCFVRAAFEAGIGLGALARLCRALDAANCDETAAQLAVLRQFVERRREALANL
                     EVQLAAMPTAPAQHAESLP"
     gene            complement(1841..2479)
                     /gene="merB"
                     /locus_tag="RHX79_003244"
     CDS             complement(1841..2479)
                     /gene="merB"
                     /locus_tag="RHX79_003244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015062793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organomercurial lyase MerB"
                     /protein_id="HDV2198383.1"
                     /translation="MKLAPYILERLTSVNRTNGTADLLVPLLRELAKGRPVSRTTLAG
                     ILDWPAERVAAVLEQATSTEYDKDGNIIGYGLTLRETSYVFEIDDRRLYAWCALDTLI
                     FPALIGRTARVSSHCAATGAPVSLTVSPSEIQAVEPAGMAVSLVLPQEAADVRQSFCC
                     HVHFFASVPTAEDWASKHQGLEGLAIVSVHEAFGLGQEFNRHLLQTMSSRTP"
     gene            complement(2494..4179)
                     /gene="merA"
                     /locus_tag="RHX79_003245"
     CDS             complement(2494..4179)
                     /gene="merA"
                     /locus_tag="RHX79_003245"
                     /EC_number="1.16.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013722692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury(II) reductase"
                     /protein_id="HDV2198384.1"
                     /translation="MTHLKITGMTCDSCAAHVKEALEKVPGVQSAIVSYAKGAAQLAL
                     DPGTAPDALTAAVAGLGYKAMLADAPPTDNRTGLFDKVRGWMGAADKGSGGERPLQVA
                     VIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRES
                     PFDGGMPPTPPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVLHGEARFKDDQS
                     LIVSLNEGGERVVMFDRCLVATGASPAMPPIPGLKESPYWTSTEALVSDTIPERLAVI
                     GSSVVALELAQAFARLGSQVTILARNTLFFRDDPSIGEAVTAAFRAEGIKVLEHTQAS
                     QVAHVNGEFVLTTGHGEVRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDKGMR
                     TSTPHIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAAINLTAMPAVVFTDPQVATV
                     GYSEAEAHHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSGRLIGVQVVAPEA
                     GELIQTAVLAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFTKDVKQLSCCAG"
     gene            complement(4251..4526)
                     /gene="merP"
                     /locus_tag="RHX79_003246"
     CDS             complement(4251..4526)
                     /gene="merP"
                     /locus_tag="RHX79_003246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system periplasmic binding
                     protein MerP"
                     /protein_id="HDV2198385.1"
                     /translation="MKKLFASLAIAAVVAPVWAATQTVTLSVPGMTCSACPITVKKAI
                     SKVEGVSKVNVTFETREAVVTFDDAKTSVQKLTKATEDAGYPSSVKK"
     gene            complement(4542..4892)
                     /locus_tag="RHX79_003247"
     CDS             complement(4542..4892)
                     /locus_tag="RHX79_003247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercuric transport protein MerT"
                     /protein_id="HDV2198386.1"
                     /translation="MSEPQNGRGALFTGGLAAILASACCLGPLVLIALGFSGAWIGNL
                     TVLEPYRPIFIGAALVALFFAWRRIYRPAQACKPGDVCAIPQVRATYKLIFWVVAALV
                     LVALGFPYVMPFFY"
     gene            4964..5398
                     /locus_tag="RHX79_003248"
     CDS             4964..5398
                     /locus_tag="RHX79_003248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000414383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance transcriptional regulator
                     MerR"
                     /protein_id="HDV2198387.1"
                     /translation="MEKNLENLTIGVFAKAAGVNVETIRFYQRKGLLPEPDKPYGSIR
                     RYGEADVTRVRFVKSAQRLGFSLDEIAELLRLDDGTHCEEASSLAEHKLQDVREKMTD
                     LARMETVLSELVFACHARQGNVSCPLIASLQGEKEPRGADAV"
     gene            5498..6502
                     /locus_tag="RHX79_003249"
     CDS             5498..6502
                     /locus_tag="RHX79_003249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element IS4321 family transposase"
                     /protein_id="HDV2198388.1"
                     /translation="MENIALIGIDLGKNSFHIHCQDRRGKAVYRKKFTRPKLIEFLAT
                     CPATTIAMEACGGSHFMARKLEELGHSPKLISPQFVRPFVKSNKNDFVDAEAICEAAS
                     RPSMRFVQPRTESQQAMRALHRVRESLVQDKVKTTNQMHAFLLEFGISVPRGAAVISR
                     LSTILEDNSLPLYLSQLLLKLQQHYHYLVEQIKDLESQLKRKLDEDEVGQRLLSIPCV
                     GTLTASTISTEIGDGKQYASSRDFAAATGLVPRQYSTGGRTTLLGISKRGNKKIRTLL
                     VQCARVFIQKLEHQSGKLADWVRDLLCRKSNFVVTCALANKLARIAWALTARQQTYVA
                     "
     gene            6779..6898
                     /locus_tag="RHX79_003250"
                     /pseudo
     CDS             6779..6898
                     /locus_tag="RHX79_003250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221059.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
     gene            6908..7024
                     /locus_tag="RHX79_003251"
     CDS             6908..7024
                     /locus_tag="RHX79_003251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198389.1"
                     /translation="MDAFTLGMLGLLIFFTVVTGGSLYLYHEKQKEKKHHNA"
     gene            7145..7519
                     /locus_tag="RHX79_003252"
     CDS             7145..7519
                     /locus_tag="RHX79_003252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198390.1"
                     /translation="MKVSNEDAQATAIYLLRAASRPAFWRDVPFDKKLEAVDSLNSIG
                     RSPSELTEWINKYLTAEQINKLGTSIRQRRRRGYGVGKSITISDKAHRILKRLSEVDG
                     CSLSEVIEKRLARAYKNTWDHK"
     gene            7633..8358
                     /locus_tag="RHX79_003253"
     CDS             7633..8358
                     /locus_tag="RHX79_003253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198391.1"
                     /translation="MMTLTTVSKKTSNNSALVFWRVGTKRKGILDVHIDFDHEEADLL
                     AELVAIRYLALDKQVFCREPGAGAGYKLVVSKGAIKKLALGKSTKAFAFKFAACLTGR
                     LKGATIEVSQSMEFMDEPGEGNIELLDVDKQAYTQTHDEISTPAIGPVLVTQHAIDQY
                     QARITSGDPKKPWASLVGRLQHPELQVQPFDEKVARHKARKYGRVDNVEVWGHRDSKF
                     KYLMVINDDNQKRVLVTVFERNE"
     gene            8491..12744
                     /locus_tag="RHX79_003254"
     CDS             8491..12744
                     /locus_tag="RHX79_003254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001257735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HDV2198392.1"
                     /translation="MRSRPSLLLMRNLRSLAVVVLATLPCVAFAQWRVVAVSTEVDKM
                     RFNTIIDAHSFMKNYRSGEEQGKGTPVGDALYPVASYGDGRYVSRICFKYLGATGDYD
                     PTTCTGDPATVYWRSTYVLPGEMDKTPFLDRDLGLPTTTMCVGNPIHLGTGNKFQAEL
                     DYQSGGSDPFTFTRYYNSHLPDEELGGWRHTYSRSVEVNASKYGENMVVLHRPEGQQL
                     AFYNSSSVWVPTWKTDDTLTKDATGWRYTQSDGVVEAYDETGRLTGIEKPNGNHITLS
                     YLNGELSSITDGFGRTIQFQYQDGRMVSVTDPAGGSIQYQYNSAGKLAEVIYQDNTSR
                     SYLYDDPNAPGLLSGLVDENGNRFATWGYDTQGRAVLSEHAGGAEKTQVSYNADGSVS
                     VTNALGHVQRYTYSRHNGMLKPDVVEGAPCTGFVGGKETYVYDSKGLVSSITDRAGQK
                     RTFTHNDRGLETTQIDQDGGKVTTDWLPSKSLPAKITEPTRITELTYDTHLRVISRKV
                     TDRSSGASRTWTYTYAPVGTGKPSLLASVDGPRTDVSDVTTFDYDDQGNLIRTTNALG
                     QVTQFGDYDANGRAGTIQGVNGVTQTLTYDARGRLVSSTGPEGTTVYNYDAVGLLSSL
                     TKPNGATVSYEYDAAHRLVAETDAQGNRRELELNDLGNPVEERLLDALGQTRWIERRI
                     FNEIGWLSSVSDAYSNQSSFSYDVVANLIQETSPSGNTHSYKYDGFHHRTQTTDPLGK
                     VTQVLYKDTGDVYRVSDPRSRLTYYSYNGFGEVTQVRSPDTGTTDITYDEAGNVATRK
                     TAKGQTTSYSYDALNRIIETSSDVAGESPILYGYDEATSPYGIGRLTSVDDGNGVRRF
                     GYTPEGWLAYETWETHGQSLTTQYQYDGAGLVTKITYPSGREVSYTRDSAGDVIEVTT
                     TQAGTTTNLASQIERAPFGPVTSMVRGNGISESRTLDLDYRVTGIDAARVHSLVYRYT
                     PDSLISAIDDNLSSSVNQSLGYDAVGRITSAEGIYGVLGYGYDATGNRTSITTDGLSQ
                     SYTINYMNNWLVKAGQTSRSYDANGNLTKQGADTFTYDSQNRLVAATVAGVTVSYTYN
                     HLDQRVTKTLNGHTRLLVYDLAGNLIEELDAATGDVLAEYIWLDGTPLGFVQSGQTYQ
                     VHVDHLGTPKALTDVSGQVVWKASYSPFGKASIIIQGPTFNLRFPGQYYDAETGFHYN
                     WRRYYDPATGRYITSDPLGLIDGVNTYGYVHGNPMSNTDPTGEFAFVGAGIGAGLELL
                     SQLIENNGSWKCVSWSKVGIAGAIGAIGGGWASGVFRHASSGKSWFKLSQKWSNVSPR
                     VRKVQGVPRGNELHHWAIQRNGKFGKYVPDSIKNHPWNLKSIPRDIHQNIHGNGPTPY
                     SAFGRWWHGTPEWAKVAQASPVSGGLADSINDEGCGCAN"
     gene            12716..13156
                     /locus_tag="RHX79_003255"
     CDS             12716..13156
                     /locus_tag="RHX79_003255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001326394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198393.1"
                     /translation="MMRDAVVQIEFPALLVSSKKRSLFVVASESEFGKCTIQSLRNGY
                     FELMDIYDSEGRHYKIDEVASYKPLSPFWYWPVEIVMYGSRLFKANFNAVLISNLDCK
                     ELKSELCDLAKKYRSNLDSGVGIEKIMEEMESARTIKELIKVFG"
     gene            13327..13779
                     /locus_tag="RHX79_003256"
                     /pseudo
     CDS             13327..13779
                     /locus_tag="RHX79_003256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221067.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(13795..14397)
                     /locus_tag="RHX79_003257"
     CDS             complement(13795..14397)
                     /locus_tag="RHX79_003257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198394.1"
                     /translation="MYKSLEDLMAGIYEMAAPDGIICNEVSKFLAANQVKPEDISSGI
                     WFFLWLKSAPKDAKPIQKEIPGFGVVLNMPTYGGTLNEAITGLIENECRQIELAEGHP
                     SLEAWVESVLAGRDDGEENEAAANIVDLLNGCHDLLDTAIINYLFKVGKINEQEILSL
                     IYYGELCDHSLVGTPFSTLHIPSENNVHERNIIPIKKGAS"
BASE COUNT         3456 a         3895 c         4024 g         3119 t
ORIGIN      
        1 caatgcgctg tccagtcatg gaattccctg caaaatgtca gggaagactc tatgaccttc
       61 aacgagatat gtcaataaat tcaaaattca atcctatcct gacgcaattt acacatggca
      121 tctgacatca ggttagggta tgcctcagtc tgacagtgat gagtcgcagg cgttcggatc
      181 ggcatcggtt tcgctcccgg tcttggcgcg cgcctggaag cgctgatagc actccagccc
      241 gcagaagtgc tcgacgtatt ccgcgccttc cggggtgaag gcggcatcga gcgggatttc
      301 cttgcagcac acgcagcaac tggtggcagt cggatcattt gcattcatgg tggcacccct
      361 ccattgactg acgaagacgg cgaatgccgc cgccggcatc ggcttggcga acaggaagcc
      421 ttgtcctgtg tcgcagtccg cttgtcgcaa caaatcaaga ctcgccgatg tttccacgcc
      481 ttcggccact acttccatgc caagcccatg cgcaagctga atcacggtgc gcacgatggt
      541 ctggtcgcgg tggtcgttgg cgagtccggc gacaaacgat tggtcgatct tgagcgtgct
      601 gatggggcag catttcaggt gttgcaggca ggaatagccg gtgccgaagt cgtcggcggc
      661 gaagcgcaca ccgatctgtc gcaaagcttc cagggcgggg aagatcgccg gatcaccgaa
      721 cgcaaccgat tcggtcagct caatttcaag atacgcggcg ggcaacccgg catcggccag
      781 cacgcccttt acccacttgt cgaaatctgg ccccacttgg ctcgccgaaa cattgacggc
      841 cagccggaac ggttgccatg ccagcacccg ccagtcgcgc atttgacggc aggctgcgcc
      901 cagcacccat gcgccgattt ccggcatcag gccggacgat tcgatcacgg gcaggaactg
      961 gcccggcggc aacagtccga gcgtcggatg acgccagcgc aacagggctt ccgcgccgac
     1021 aatctgctca ctgcgcaaat cgacaatcgg ctggtagtgc agctcaagct gcccgcgctc
     1081 gaccgcctgc gccagttgcg ccactgtcca ttcaattggc tgggaagcgc tcatgatcga
     1141 cctctgaagg cccgcagcag ccgcgtcaca gacaggacaa acaagccggt cagcgtgagg
     1201 gctgcaatac cccagtgctc gccgatgaac gcgccggccg tcgtgccggc cagcacaatg
     1261 gcgagaatcg gcaaatgaca gggacaggtg agcaccgcca gcgcacccca caggtagccg
     1321 gtgaacggct tgtgtgtctc ggccggcatg cgctcggggc tgttcatggc aaactctccg
     1381 catgctgtgc cggcgcggtc ggcatggcgg ccaactgcac ttccagattg gccaacgctt
     1441 cgcgccggcg ttcgacgaac tgacgcagca cagcaagctg cgcggcagtt tcatcgcagt
     1501 tcgccgcatc cagcgcccgg cacagccgcg ccaatgcgcc gaggccgatg cccgcctcga
     1561 aggcggcccg cacgaagcac agtcgctgca aggcggcgtc atcgaacagg ccgtagccac
     1621 ccgtggtgca ggcgactggc cgcagcaatc cgcgcagcag gtagtcgcgc acgatatgca
     1681 cgctcacccc ggcatcaagg gccagccggg acaccgtgta ggcgttcatc gaacacctcc
     1741 ttttggtcgg ttcacggcaa tgcatatacc gtttcgccga gttcaatccg cgcgctgcga
     1801 atccgatgcc ggtgccgtag aacattgggt cgatatccga tcacggtgtc ctagatgaca
     1861 tggtctgcaa cagatgtcga ttaaactcct ggcccaagcc gaaagcctcg tggacactga
     1921 cgatcgccaa tccttccaat ccttgatgct tggaggccca gtcttccgcc gtcgggacag
     1981 atgcaaagaa atgtacatgg caacagaagg actgacgaac gtcggctgct tcctgcggca
     2041 ataccaagga caccgccatg ccggcaggtt cgacagcctg tatctcgctg ggtgaaaccg
     2101 tgagtgaaac gggtgctccg gttgcagcgc aatgcgatga gacgcgagct gtacggccga
     2161 tcagcgccgg aaatatcaag gtgtccagcg cgcaccaggc atacagacgg cggtcgtcaa
     2221 tttcaaagac atacgaagtc tcgcgcaagg tgaggccgta gccgatgatg ttcccatctt
     2281 tgtcatattc ggtactggtg gcctgttcga gtacggcggc cactcgctca gcgggccagt
     2341 cgagaatccc ggcaagtgtc gttcgtgaaa ccggacgccc cttggcgagt tcccgcagta
     2401 gcgggaccaa gagatccgca gtaccattgg tacgattgac cgaagtgaga cgttctaaaa
     2461 tatatggggc gagcttcatg gttccatctc ctttcatcct gcgcagcagg acaattgttt
     2521 gacatccttg gtgaaggtct gcgccgcgag cttcagcccc tcgaccatcg tcaggtaggg
     2581 gaacaactgg tcggccagtt cctgcaccgt catgcggttg cgaatggcga gaacagccgt
     2641 ctggatcaat tcgccggctt ccggggcgac gacctgcacg ccgatgagcc gtccgctacc
     2701 ttcctcgatg accagcttga taaagccgcg tgtgtcgaag ttggcaagcg cacgcggcac
     2761 gttgtcgagc gtgagcgtgc gactgtcggt ttcgatcccg tcgtgatgcg cttccgcttc
     2821 gctgtagccc acggttgcta cttgcggatc ggtgaacacc acggccggca tcgcggttag
     2881 attgatggca gcatcccctc cggtcatgtt gatcgcggca cgggtgccgg ccgctgccgc
     2941 cacatagacg aattgtggct ggtccgtgca gtcgccggcc gcgtaaatgt gtggcgtgct
     3001 ggtgcgcatg cccttgtcga tgacgatggc accctgcgca ttgacggtga ctcccgccgc
     3061 gtcgagtgcc aggctgcgcg tgttcggtgt ccgtccggta gcgaccagca gcttgtcggc
     3121 acgtacttca ccgtgtcccg tggtcagcac gaattcgccg ttcacatgcg cgacctggct
     3181 ggcttgcgtg tgttccagta ccttgatccc ttcggcacgg aaggccgctg tgacggcctc
     3241 gccgatggac gggtcgtcgc ggaagaacag cgtgttgcga gctaggatcg tgacctggct
     3301 gcccagccgg gcgaaggctt gcgccagttc cagcgcgacc accgacgagc cgatcacggc
     3361 taggcgttcg ggaatggtgt cgctgaccaa ggcctcggtc gaagtccagt agggtgactc
     3421 tttcaggccc ggaatcggcg gcatggccgg actggcaccc gtggcgacca ggcagcggtc
     3481 gaacatcacg acgcgctcac caccctcgtt caaactaacg ataaggctct ggtcgtcctt
     3541 gaaacgcgct tcaccgtgca gaacggtgat ggctgaattg ccgtccagga tgccttcgta
     3601 cttggcatga cggagttctt cgacacgggc ctgctgctgg gccagcagcc gctcgcgcaa
     3661 gatcgtcggc ggtgtgggtg gcatgccgcc gtcgaatggg ctttcccggc gcagatgggc
     3721 gatgtgggcg gcgcggatca tgatcttgga cggcacacaa ccgacgttga cgcaggtgcc
     3781 gccgatggtg ccgcgctcaa tcagcgtgac ctgcgcgcct tgctcgacgg ccttcagtgc
     3841 tgccgccatc gcggctccac cgctgccgat cacggcgact tgcaacgggc gctcgccgcc
     3901 gctgcccttg tcggcggcac ccatccagcc gcgcaccttg tcgaacagcc cagtgcggtt
     3961 gtcggtcggc ggggcatcgg cgagcatcgc tttgtagccc aggccagcca cggcggcggt
     4021 cagtgcgtcc ggcgctgtgc ctggatcaag ggcgagctgg gccgcgccct tggcatagga
     4081 cactatggca gattggacgc cgggtacttt ttccagcgct tccttgacgt gcgccgcgca
     4141 cgagtcgcag gtcatgccgg tgatttttag atgggtcatg cgacagatcc tttttcgttt
     4201 gtggtagcag acaagggcgt cagatgtgct gcgctgccgt tttcagtgcc tcacttcttg
     4261 acgctggacg gatagcccgc gtcttcggtg gccttggtca gcttctgcac gctggtcttg
     4321 gcatcatcga aggtgacaac cgcttcgcgt gtctcgaagg tcacgttaac tttgctgacg
     4381 ccttcgacct tggaaatcgc cttcttaacg gtgatcggac aagcggagca ggtcatgccc
     4441 ggtacggaca gcgtgacggt ctgggtggcg gcccacacgg gggcaacaac ggcagcgatg
     4501 gcgagagagg caaacagttt tttcatgatg aactcctgtg attaatagaa aaatggcatg
     4561 acgtagggaa atccgagcgc gaccagaacc agcgcggcca cgacccagaa aatgagcttg
     4621 taagtagcgc gcacttgggg aatcgcacac acatcccctg gtttgcaggc ttgcgccggt
     4681 cggtagatgc gccgccaggc gaaaaacagc gccaccaacg ccgcgccgat gaagatcggg
     4741 cgataaggtt ccaacaccgt caagttgccg atccaagcgc cgctgaaccc cagggcgatc
     4801 agaaccagcg gccccaggca gcaagccgag gcgaggatgg cggctagccc gccagtgaag
     4861 agcgccccgc gcccgttttg aggttcagac atacgcttgt cctttcaaat ctggattgga
     4921 tagcttaagc ttacttccgt accaatgtac ggagtcaagc gatatggaaa aaaatttgga
     4981 gaatctgact attggcgttt tcgccaaggc ggccggggtc aacgtggaaa caatccggtt
     5041 ctatcagcgc aagggcttgt tgccggagcc ggacaagccc tatggcagca tccgccgcta
     5101 tggcgaggcg gatgtgacgc gggtgcgctt cgtgaaatca gcccagcggc tcggattcag
     5161 cctcgacgag atcgcagagc tgctgaggct ggatgacggc acccactgcg aggaagccag
     5221 cagcctggcc gagcacaagc ttcaggacgt gcgcgaaaaa atgaccgacc tggcgcgcat
     5281 ggaaaccgtg ctatccgaac ttgtgttcgc ctgccatgcg cggcaaggga acgtttcttg
     5341 cccgctgatt gcttcgctgc aaggggagaa agagccgcgt ggtgccgacg cggtgtagcc
     5401 gagggtagtt acgccttagc gtgctttatt taatgagatg gtcactccct ccttcccggt
     5461 actatgctga ggacaggctt tcattcggag aactatcatg gaaaacattg cgctcattgg
     5521 tatcgatctg ggtaaaaact ctttccatat tcattgccag gatcgtcgcg ggaaggctgt
     5581 ttaccgtaaa aaatttaccc ggccaaagtt gatcgaattt ttggcgacat gccccgctac
     5641 aaccatcgca atggaagcct gtggcggttc tcactttatg gcacgcaagt tggaagagtt
     5701 ggggcattcc ccaaagctga tatcaccaca atttgtccgc ccgttcgtta aaagcaataa
     5761 aaacgacttt gtcgacgccg aagctatttg tgaagctgca tcgcgtccgt ctatgcgttt
     5821 tgtgcagccc agaacggaat ctcagcaggc aatgcgggct ctgcatcgtg tccgtgaatc
     5881 cctggttcag gataaggtga aaacaaccaa tcaaatgcat gcttttctgc tggaatttgg
     5941 cattagcgtt ccccgaggag ctgccgttat tagccgactg agtaccattc ttgaggataa
     6001 tagtttgcct ctttacctca gccagttatt gctgaaatta caacagcatt atcactatct
     6061 tgttgagcag attaaagatc tggaatccca gttgaaacga aagttggacg aagatgaggt
     6121 tggacagcgc ttgctgagca ttccctgcgt cggaacactg acagcgagta ctatttcaac
     6181 tgagattggc gacgggaagc agtacgccag cagccgtgac tttgcggcgg caacagggct
     6241 tgtacctcgg cagtacagca cgggaggtag gacgacattg ctgggaatta gtaagcgagg
     6301 taataaaaag atccgaactt tgttggttca gtgtgccagg gtattcatac aaaaactgga
     6361 acaccagtct ggcaaattgg ccgattgggt cagggattta ctgtgccgga aaagcaactt
     6421 tgtcgtcact tgtgctctgg caaacaagct ggccagaata gcctgggccc taacggcacg
     6481 acagcaaact tatgtagcat aacggcagaa atacaccggt ttaaagaatt actgatctgg
     6541 ttttgcgaat actgatattg atgatactaa cggcccaccg gcctgttgag gaacctgtaa
     6601 aacggaaagg ctcattgaag ccgtatattt tctggaggtt catcaggcgc ggaactcatc
     6661 aaggcgcggg aataaaatcc cattcagacg ccggatagat tcaagcaagc caacttgtcg
     6721 tcaaaatcgg tgttgcaaaa acgggagtga ccatagattc cgttttctga gacgacccct
     6781 tgtaggattg gctgtatctg gggacactat aaccgtcaaa gaagccggtt tggtgttggt
     6841 cattggggtt atcctgtgga tctatggtat aatcttaacc aaggtcagca attcctaagg
     6901 gggtcaaatg gacgctttca cattaggcat gttggggttg ctcatttttt tcactgtcgt
     6961 cactggcggc agtctgtatc tctaccatga gaaacagaag gaaaaaaagc atcacaacgc
     7021 ctaaagagta actgcgacaa tgaacgtaaa ggccagcaat agctggcctt tttttatact
     7081 tgcagtttga ggtgttacat gtcacgataa ggtaagtgtg acatgtaacg gaaaaggtga
     7141 ttttttgaaa gtatccaatg aagatgctca ggctacggcg atctatctcc tcagagctgc
     7201 ttcgcgccca gctttctggc gtgacgtccc attcgataag aaacttgaag ccgtggacag
     7261 cctgaacagc atagggcgat caccatcaga actcactgaa tggattaata aatacctgac
     7321 agcagagcaa atcaataaac tcgggacatc aattaggcaa cgtcgcagaa ggggatatgg
     7381 tgttggtaaa agcataacta taagcgataa agcccacagg attttgaagc ggttgtcaga
     7441 agtcgatggt tgcagtttgt cagaagtgat cgagaaacgc ctagcccgag cttataaaaa
     7501 tacatgggac cataaataga gtgacactag gggttgcatt tttaaaaccc gtgatagcat
     7561 ctaaatgaac ccaaacgaat aggggggctg gcggcgatgc cgaccattat cccgacaatg
     7621 gagaaataga ccatgatgac attgactacc gtctcgaaga aaacttcaaa taattcagcc
     7681 cttgtattct ggcgcgttgg tacaaaacgg aaaggcatcc ttgatgtcca tattgatttt
     7741 gaccacgaag aagcggatct tttggctgag ctcgtagcca ttcgctatct ggcgctggac
     7801 aaacaggttt tttgcagaga gccaggtgct ggtgctggtt acaagctggt ggtatccaaa
     7861 ggtgcaatca agaagctggc gctgggcaaa tccaccaagg cttttgcttt caagtttgcg
     7921 gcttgcctca ctgggcgttt aaagggcgct actattgaag tctcgcagag catggagttt
     7981 atggatgagc cgggagaggg caacattgag ctcctcgatg tggacaagca agcctatacc
     8041 cagacccatg acgaaatatc tacacctgcc attggccccg tcctggttac tcaacatgcc
     8101 atcgatcagt atcaggcccg gataacctct ggagacccta aaaaaccgtg ggcctcactt
     8161 gttggccgcc tccagcatcc agagttacag gttcagccct ttgacgagaa agtggctcgc
     8221 cataaagcca gaaagtatgg ccgcgtagat aacgtggaag tctggggcca tagagattcc
     8281 aagttcaagt acctgatggt gatcaacgac gacaaccaaa aacgtgttct tgtcacagtg
     8341 tttgagcgaa atgagtaacc tgcttctcat ttgttctgaa tacacaacct ctccaaatca
     8401 cgtattcata ccctaaaagg gcaataacgc agtcgttgat aacgactctc ccacctgaaa
     8461 atagctccag cataaaaact ggagctgtaa atgagatcga gaccttccct tttactgatg
     8521 cgaaacctgc ggtcattggc cgttgtggtg ctcgcaactt tgccatgcgt tgcttttgca
     8581 caatggcggg ttgtagccgt gagcaccgaa gtagacaaaa tgcgcttcaa caccatcata
     8641 gacgcgcatt ccttcatgaa gaattatcgc tctggtgagg agcaagggaa gggaacgcca
     8701 gttggggatg cgctttatcc ggttgccagt tatggtgatg gccgttatgt ctccaggatc
     8761 tgttttaagt atctaggtgc tactggcgat tatgacccca ctacctgcac tggcgaccca
     8821 gctacggtct actggcgctc aacctatgtt ctgccgggtg agatggataa aacaccgttc
     8881 ctggacaggg atctcggctt accaacaacg accatgtgtg tagggaaccc tatccatctt
     8941 ggcaccggca acaagttcca ggctgaactg gattatcaaa gcggaggctc cgaccctttc
     9001 acattcacca gatactacaa tagccacctt cctgatgaag agctcggcgg ctggcggcat
     9061 acctactcgc ggagcgtcga ggtcaacgcc tcgaagtacg gtgagaacat ggttgtcctg
     9121 caccggccag aagggcaaca actcgcgttc tacaactcgt cctctgtctg ggtgccaaca
     9181 tggaaaaccg atgatacctt gacgaaggat gctaccggct ggcgctacac tcaatctgac
     9241 ggggtagtcg aggcctatga tgaaaccgga cgactgaccg gcatcgagaa gcccaacggc
     9301 aatcacatca ccctgagcta tctgaacgga gagctatcct cgatcactga cggctttggc
     9361 cgcaccatcc agttccagta tcaagatggc cgcatggtca gtgtcaccga tcctgctggt
     9421 ggcagtattc agtaccagta caacagcgct ggcaagctgg cggaagtgat ctaccaggac
     9481 aatacgagcc gcagctatct ctacgatgac ccgaatgcac cgggtttgct ctctgggctg
     9541 gtggacgaga acggcaaccg tttcgccaca tggggatatg atactcaggg gagagcggtt
     9601 ctaagcgaac acgccggggg cgcagagaaa actcaggtaa gctacaacgc tgacggaagc
     9661 gtctctgtca ccaatgccct cggccacgtt cagcgataca cctacagtcg ccacaatggg
     9721 atgctcaagc ctgatgtggt tgagggtgcg ccgtgtaccg gctttgtggg cggcaaggaa
     9781 acctacgtct acgacagcaa aggcctcgtc tccagcatta ctgaccgcgc tgggcagaag
     9841 cgcacgttca cccataacga ccggggattg gaaaccaccc agatagacca ggacgggggt
     9901 aaggttacga ccgactggct tccttccaag tcgctcccgg caaaaatcac agaaccaacc
     9961 aggatcactg agctcaccta cgacactcat ctccgggtga taagccgcaa ggtcactgat
    10021 cgcagctcgg gcgcttcccg gacatggacc tacacctatg cccctgttgg tacaggaaag
    10081 ccgagcctgt tggcctcggt tgatggtccg cgcaccgacg tcagcgatgt tacgacattt
    10141 gactacgatg accagggcaa cctgatccgg acaacgaacg cgctggggca ggtgacgcag
    10201 tttggtgact acgacgcgaa cggtcgcgcc gggaccattc agggtgtcaa tggtgtaacc
    10261 caaaccctca cctatgacgc cagaggaaga cttgtcagct ccactgggcc agaaggaacc
    10321 acggtctaca actatgatgc tgtgggcctc ctgagttcgc tgaccaagcc aaatggtgca
    10381 accgtcagct atgagtacga cgctgcacat cggctggtgg cggaaacaga tgcacagggc
    10441 aaccggcgcg agcttgagct caatgacctc gggaacccag tagaagagcg actgctcgat
    10501 gcgctgggcc agacccgttg gatagagcgc cggatcttca acgaaatcgg ctggctctcc
    10561 agtgtctccg acgcctatag caatcagtca tcgttttcct acgatgtggt ggcaaacctg
    10621 atacaggaga ccagtccctc tggtaacaca cactcctaca agtacgacgg cttccatcac
    10681 cggacacaaa cgaccgatcc cctcgggaag gtcacgcagg tgctctacaa ggataccggc
    10741 gatgtttacc gtgtctccga ccctcgttcg cgcctgacct actacagcta caacggcttt
    10801 ggcgaagtga cccaggtccg gagcccggac accggcacca ccgacattac ctatgacgaa
    10861 gccggtaacg tggcaacgcg caaaacggcc aaggggcaaa ccacaagcta cagctatgac
    10921 gcgctgaacc ggatcatcga aacctccagc gatgtcgctg gcgaatcgcc aattctgtac
    10981 gggtacgacg aagcaacctc accatacggc ataggccgct tgacctcagt cgatgatggc
    11041 aacggtgtcc ggagatttgg ctacaccccc gaaggatggc tggcttacga aacctgggaa
    11101 acccacgggc agagcctgac tacccagtac caatacgatg gtgcaggcct cgtcacgaag
    11161 atcacgtatc ccagtggccg tgaggtctcc tacacccgtg actcagccgg tgacgtcatc
    11221 gaggtgacaa cgacacaagc aggcaccaca acaaacctgg caagccagat tgagcgagcg
    11281 ccctttggcc ccgtcaccag tatggtcaga gggaacggca tttcagaaag ccgcactctg
    11341 gatctcgatt accgtgtcac cggcatcgac gctgctaggg tgcattcgct ggtctatcgg
    11401 tacacgccag actcgttgat ttcagccata gacgacaatc tcagctcatc agtcaatcag
    11461 tcactcggtt atgacgcggt tggccgcatc acctctgctg aggggatcta tggcgttttg
    11521 ggctatggct atgacgccac cggcaacagg acctcgatca cgaccgatgg cctgagccaa
    11581 agctacacca tcaactacat gaacaactgg ttggtgaagg ccgggcaaac ctccagaagc
    11641 tatgacgcca atggcaacct gacgaagcag ggggcggata ccttcaccta tgacagccag
    11701 aaccggctgg tggccgcaac ggtcgcggga gtgactgtaa gctacacata caaccatctg
    11761 gatcagcgtg taaccaagac cctaaacggg catacccggc tgctggttta cgacctggca
    11821 ggaaacctca tcgaggagct ggacgcggcc actggagacg tgctggcgga gtacatctgg
    11881 ctcgatggga cacccttggg ctttgttcag tcaggacaga cctaccaagt ccacgtcgat
    11941 cacctgggca ccccgaaggc actgaccgac gtcagcggcc aagtcgtttg gaaggcgagc
    12001 tacagcccgt tcggtaaggc cagcatcatc atccaggggc caaccttcaa cctgcgattc
    12061 ccaggacagt attacgacgc ggagaccggg ttccactaca actggcggcg ttactacgac
    12121 ccagcgaccg ggcggtacat taccagcgac cctcttggcc tgatcgatgg agtaaacacc
    12181 tacgggtatg tgcatggaaa ccctatgtcc aataccgacc cgacgggtga atttgcgttt
    12241 gttggtgcag gtattggagc tgggttggag ctacttagcc aactaatcga aaataatggg
    12301 agttggaaat gtgttagttg gtcaaaagtt ggaatcgccg gagcgattgg ggctataggt
    12361 ggcggctggg cgtcaggagt tttcagacat gccagctccg gtaaatcgtg gttcaaatta
    12421 agccaaaaat ggagcaatgt ctcacccaga gtaaggaaag ttcaaggggt tccacgaggt
    12481 aatgagcttc accattgggc tattcagaga aatggcaagt ttggcaaata tgttcctgac
    12541 tcaataaaaa accatccttg gaacttgaag tccattccaa gagatattca ccaaaacatt
    12601 cacggcaatg gacctacccc atatagcgca tttggtcgtt ggtggcacgg gacgcctgaa
    12661 tgggcaaaag tagctcaagc ctctcctgtt agtggtggtt tagctgattc aataaatgat
    12721 gagggatgcg gttgtgcaaa ttgaatttcc agcgctgctt gtgagcagca agaaaaggtc
    12781 gctcttcgta gtggcatcag aatccgagtt cgggaaatgt actattcagt ctttgaggaa
    12841 cggttatttt gagctgatgg acatttatga ttcggaaggt cgtcactaca aaatagacga
    12901 ggttgcgagc tacaagccgc taagtccatt ctggtactgg cctgtagaaa ttgtgatgta
    12961 tggttctcga ctgtttaagg ctaatttcaa tgctgttctt atctctaatc tggattgcaa
    13021 ggagttaaaa tctgaacttt gtgatttggc taaaaagtac agaagtaatt tggattccgg
    13081 cgtcggaatt gaaaagatta tggaggaaat ggagtctgcc agaacaatta aagaattgat
    13141 aaaggttttt ggctagttat tcattgaata cgctggtgtt agtctagcta accgacgcca
    13201 gcggccaagt gtttggaagg cgagccatca tagagtcagt agagagagat acttttggaa
    13261 atcaatagta ttatgattgg tacaaatgag ttgtagctcc atattttaaa gggggatttc
    13321 agagaaatga agaataagaa ggtaataact ttgataatgg ccgcagccgc atcatgctcg
    13381 tcagtctacg ccgcgacatt accgaccagt gaggtagacg catacatact tgcgatgaac
    13441 accatgtcac ctatcactgc aaagtacacc atctagtaca agcaagcggt tgagcagaaa
    13501 tgcaatacag ccctgagcgt tgagcagctc aactcaaagg cattcaccaa tgttgtccag
    13561 gcaatggtga gtagtgagac cgtcgataga atggggcttg atgctgctgg tggatcactc
    13621 caggataccc tgtctgtgat cggcaagaac gtcacatgca gtgacctgaa cgcgccattt
    13681 aaagcactct tggatgataa ggacttcacc agaaagcatc agcacctatc gaaggtgctg
    13741 catacttgga atgaagttgt ttctcaaagc aaaccctgag taacaaaaag gagcctaact
    13801 ggctcctttt ttaatgggga tgatgttacg ttcgtggacg ttattttcac tcgggatatg
    13861 taacgttgaa aaaggcgtac cgacaagaga gtggtcacat agctctccat aatagatgag
    13921 cgacaaaatc tcttgctcgt tgatttttcc caccttaaaa aggtaattga ttattgctgt
    13981 atccagtagg tcgtgacacc cattaagcag atccacgata ttggccgcag cttcattttc
    14041 ctctccgtca tctcgaccgg ctaatactga ttcaacccaa gcctcaaggc tcggatgtcc
    14101 ctcagcgagc tctatttgac ggcactcgtt ctcgatcaac cctgtgattg cttcgttgag
    14161 cgttccgcca taagtcggca tgttgagaac aactccaaat ccggggattt ctttttggat
    14221 tggcttcgca tccttgggag ctgatttcag ccacaggaaa aaccagatcc cagagcttat
    14281 gtcttccggc ttgacctggt tggccgcaag gaatttggaa acctcgttac agatgatgcc
    14341 atctggcgct gccatctcgt aaatacccgc catcagatct tcaaggctct tatacatatt
    14401 atctctcgca cctgtacatg atgttttcac tatcgttgtt aagcgttttt tcagcaagta
    14461 tgttccagcg agacatctta taccattcca tcta
//
LOCUS       DAPGWB010000112        14478 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.113, whole genome shotgun sequence.
ACCESSION   DAPGWB010000112 DAPGWB010000000
VERSION     DAPGWB010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14478)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14478)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14478
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.113"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            27..593
                     /locus_tag="RHX79_003258"
     CDS             27..593
                     /locus_tag="RHX79_003258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDV2198395.1"
                     /translation="MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEI
                     HQDDIDKEVELGQVTTSHINQSHHSDAVAVDLRLVNCDLENSSNGSGGKISKVAVTFD
                     SSAKTTGADPILNNTSTGEATGVGVRLMNKDQSNIVLGTATPDIDLAPTSSEQTLNFF
                     AWMEQIDQATPVTPGAVTANATYVLDYK"
     gene            644..3103
                     /locus_tag="RHX79_003259"
     CDS             644..3103
                     /locus_tag="RHX79_003259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706516.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HDV2198396.1"
                     /translation="MDTVNIYRLSFVSCLVVAMPCALAVEFNLNVLDKSMRDRIDISL
                     LKEKGVIAPGEYFVSVAVNNNQISNGQKINWHKNDDKTIPCINDLLVDKFGLKPEVRQ
                     SLPLINQCVDFSSRPEMLFNFDQANQQLNITIPQAWLAWHSENWTPPSTWKEGVAGVL
                     MDYNLFASSYRPQDGSSSTNLNAYGTAGINTGAWRLRSDYQLNQTDSDDNHEQSGEIS
                     RTYLFRPLPQLGSKLTLGETDFSSNIFDGFSYTGAALASDDRMLPWELRGYAPQISGI
                     AQTNATVTISQSGRVIYQKKVPPGPFIIDDLNQSVQGTLDVKVTEEDGRVNNFQVSAA
                     STPFLTRQGQVRYKLAAGQPRPSMSHQTENETFFSNEVSWGMLSNTSLYGGLLLSGDD
                     YHSAAIGIGQNMLWLGALSFDVTWASSHFDTQQDERGLSYRFNYSKQVDATNSTISLA
                     AYRFSDRHFHSYANYLDHKYNDSDAQDEKQTISLSVGQPITPLNLNLYANLLHQTWWN
                     ADASTTANITAGFNVDIGDWRDISISTSFNTTHYEDKDRDNQIYLSISLPFGNGGRVG
                     YDMQNSSHSTTHRMSWNDTLDERNSWGMSAGLQSDRPDNGAQVSGNYQHLSSAGEWDI
                     SGTYAANDYSSVSSSWSGSFTATQYGAAFHRRSSTNEPRLMVSTDGVADIPVQGNLDY
                     TNHFGIAVVPVISSYQPSTVAVNMNDLPDGVTVAENVIKETWIEGAIGYKSLASRSGK
                     DVNVIIRNASGQFPPLGADIRQDDSGISVGMVGEKGHAWLSGVAENQKFTVVWGDSQH
                     CSLHLPEHMEDTANRLILPCH"
     gene            3118..3849
                     /locus_tag="RHX79_003260"
     CDS             3118..3849
                     /locus_tag="RHX79_003260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706517.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDV2198397.1"
                     /translation="MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDN
                     RSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTTKLPGDRE
                     TLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQG
                     NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGNYSGSQFYLGYMD
                     DYGALRMTTLNCSGQCHLQAVEAKK"
     gene            3846..4907
                     /locus_tag="RHX79_003261"
     CDS             3846..4907
                     /locus_tag="RHX79_003261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2198398.1"
                     /translation="MSAGKGVLLVICLLFLPLKSALALNCYFGSSGGSVEKSEAIQPF
                     AVPGNAKLGDKIWESDDIKIPVYCDNNTNGNFESEHVYAWVNPYPGVQDRYYQLGVTY
                     NGVDYDANQGKSRIDTNQCIDSKNIDIYTPEQIIAMGWQNKICSGDPANIHMSRTFLA
                     RMRLYVKIREMPPHDYQSTLSDYIVVQFDGAGSVNEDPTAQNLKYHITGLENIRVLDC
                     SVNFSISPETQVIDFGKFNLLDIRRHTMSKTFSIKTTKSQNDQCTDGFKVSSSFYTEE
                     TLVEEDKALLIGNGLKLRLLDENASPYTFNKYAEYADFTSDMLVYEKTYTAELSSIAG
                     TPIEAGPFDTVVLFKINYN"
     gene            5059..6105
                     /locus_tag="RHX79_003262"
     CDS             5059..6105
                     /locus_tag="RHX79_003262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415243.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HDV2198399.1"
                     /translation="MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG
                     ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAANWPIVLAILLVTLLSSAIVGWLL
                     VRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRM
                     MLGDNAEAVNQQIVWFPPVSINLLLTILLAVVAGTAGCMLRLPSGTMLIPMLAGAVLQ
                     SGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGM
                     AWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPA
                     IARFISTYAPKRSA"
     gene            complement(6102..6893)
                     /gene="nei"
                     /locus_tag="RHX79_003263"
     CDS             complement(6102..6893)
                     /gene="nei"
                     /locus_tag="RHX79_003263"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease VIII"
                     /protein_id="HDV2198400.1"
                     /translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQH
                     VTHVETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTSEEPQTTRVLRVKLQTADKTIL
                     LYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLD
                     QAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDE
                     NKHHGALFRFKVFHRDGELCERCGGIIEKTTLSSRPFYWCPGCQH"
     gene            complement(6929..7663)
                     /gene="pxpA"
                     /locus_tag="RHX79_003264"
     CDS             complement(6929..7663)
                     /gene="pxpA"
                     /locus_tag="RHX79_003264"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HDV2198401.1"
                     /translation="MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACV
                     REAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRH
                     VKPHGMLYNQAAKEAQLADAIARAVYACDPALVLVGLAGSELIRAGKQYGLTTREEVF
                     ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQHGRVKSITGEWATVTAQTVCLH
                     GDGEHALAFARRLRSTFAEKEIVVAA"
     gene            complement(7653..8585)
                     /gene="pxpC"
                     /locus_tag="RHX79_003265"
     CDS             complement(7653..8585)
                     /gene="pxpC"
                     /locus_tag="RHX79_003265"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpC"
                     /protein_id="HDV2198402.1"
                     /translation="MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLV
                     GNDANAPALEITLGQLTVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTL
                     KRPQHGMRSYLAVAGGIDVPPVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKAKRDFM
                     EAQGVKQLLWGNRIRALPGPEYHEFDRASQDAFWRSPWQLSSQSNRMGYRLQGQILKR
                     TTDRELLSHGLLPGVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQ
                     PIHFVQCSLEEALKARQDQQRYFEQLAWRLHNEN"
     gene            complement(8579..9235)
                     /gene="pxpB"
                     /locus_tag="RHX79_003266"
     CDS             complement(8579..9235)
                     /gene="pxpB"
                     /locus_tag="RHX79_003266"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDV2198403.1"
                     /translation="MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVV
                     EAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDL
                     AVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPA
                     GSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
                     "
     gene            complement(9258..10001)
                     /gene="ybgI"
                     /locus_tag="RHX79_003267"
     CDS             complement(9258..10001)
                     /gene="ybgI"
                     /locus_tag="RHX79_003267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000798886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radiation resistance protein YbgI"
                     /protein_id="HDV2198404.1"
                     /translation="MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA
                     SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDA
                     HPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDT
                     GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT
                     ERGGIRALSEWLNENTDLDVTFIDIPNPA"
     gene            10272..11753
                     /gene="dtpD"
                     /locus_tag="RHX79_003268"
     CDS             10272..11753
                     /gene="dtpD"
                     /locus_tag="RHX79_003268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide permease DtpD"
                     /protein_id="HDV2198405.1"
                     /translation="MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYND
                     THAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSF
                     LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY
                     AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV
                     LLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF
                     SMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE
                     SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL
                     FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINY
                     SINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES"
     gene            complement(11795..13213)
                     /gene="phrB"
                     /locus_tag="RHX79_003269"
     CDS             complement(11795..13213)
                     /gene="phrB"
                     /locus_tag="RHX79_003269"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HDV2198406.1"
                     /translation="MITHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWAT
                     HNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFY
                     NYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK
                     RLREGMPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQN
                     GAGDYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSEL
                     IWREFYRHLMTYYPSLCKHRPFIAWTDRVQWQSNPAHLQAWQKGKTGYPIVDAAMRQL
                     NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTD
                     AAPYFRIFNPITQGEKFDREGEFIRRWLPELRDVPGKAVHEPWKWAQKAGVKLDYPQP
                     IVDHKEARLRTLAAYEEARKGA"
     gene            complement(13210..13719)
                     /locus_tag="RHX79_003270"
     CDS             complement(13210..13719)
                     /locus_tag="RHX79_003270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HDV2198407.1"
                     /translation="MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVF
                     LAHSQPEYRKLGPFVADIHQWQNLDDFYNQYYQRVIVLLSHPANPRDHTNVLMHVQGY
                     FRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV
                     INLRHSGVL"
     gene            complement(13870..14478)
                     /locus_tag="RHX79_003271"
                     /pseudo
     CDS             complement(13870..14478)
                     /locus_tag="RHX79_003271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000420980.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
BASE COUNT         3498 a         3863 c         3511 g         3606 t
ORIGIN      
        1 tttcttttct gttaaaggac tccgttatgt ttaaaggaca aaaaacattg gccgcactgg
       61 ccgtatctct gctgttcaca gcacctgttt atgcggctga tgaaggatcc ggtgaaattc
      121 actttaaagg tgaagttatt gaagcaccgt gtgaaataca tcaggatgat attgataaag
      181 aggttgaact cggtcaggtg accaccagcc acattaatca gtcacatcac agcgatgccg
      241 ttgctgtcga cctgcgctta gtcaactgtg atctggaaaa ctccagcaac ggttccggtg
      301 gcaagatttc taaagttgca gtcacctttg atagctcagc gaaaaccacc ggcgcagatc
      361 cgattctcaa caacaccagc acgggtgaag ccaccggcgt cggcgtacgt ttaatgaata
      421 aagatcaaag caatatcgtt ttaggcaccg ctactccaga tatcgacctg gctccgacct
      481 ccagcgaaca aacgctgaat ttctttgcct ggatggaaca aattgatcag gctacacctg
      541 taacgccagg cgcagttacg gcgaatgcaa cctacgtgct ggattataaa taagtattac
      601 tttggcggcg ctatcgccgc ctttcataaa atatttatca ggtatggaca ccgtgaatat
      661 ttatcgactc tcttttgtat cctgcctggt cgtggcgatg ccttgcgcat tggcggtcga
      721 attcaacctt aatgttctcg ataaatcaat gcgcgaccgc attgatattt cattattaaa
      781 ggaaaaagga gtcattgctc ccggtgagta ttttgttagc gttgcggtaa ataataacca
      841 aatcagtaac gggcaaaaga ttaactggca caaaaatgac gataaaacca ttccgtgcat
      901 caatgattta ctggtcgata aatttggctt aaaacctgaa gtccgtcagt cgttaccatt
      961 gataaatcag tgcgtcgatt ttagctcccg acctgaaatg ctcttcaatt tcgatcaagc
     1021 caatcagcaa ctaaatatca ccattccgca agcctggctg gcgtggcact cagaaaactg
     1081 gaccccaccc tccacatgga aagaaggtgt cgccggtgtc ctgatggatt acaacttgtt
     1141 tgccagcagc taccgcccac aggatggcag cagcagcact aatcttaacg cctatggaac
     1201 agccggaatc aacacggggg catggcgctt acgcagtgat tatcagttga atcagactga
     1261 tagcgatgat aaccatgaac agtcaggcga aatatcacgt acctatcttt ttcgcccgtt
     1321 accgcaatta ggttcaaaat taaccctcgg cgaaacggat tttagttcca atattttcga
     1381 cggtttttct tataccggcg cggcactggc aagtgacgat cgaatgttgc catgggaact
     1441 acgcggctac gccccacaaa ttagcggtat tgcacagacc aatgccacgg tgacgatcag
     1501 tcaatcaggc cgcgtcattt accagaaaaa agtcccacca ggcccattta tcattgacga
     1561 ccttaatcag tctgttcagg gcacactgga tgtcaaagtg acggaagaag atggtcgggt
     1621 gaacaatttc caggtttcgg cagcatcgac gcccttcctg actcgtcagg gacaggttcg
     1681 ctataaactg gccgcgggtc agccacggcc ctccatgtca catcaaactg aaaatgaaac
     1741 cttttttagc aatgaagttt cctgggggat gctgtcaaac acctcgctgt acggcggcct
     1801 gctgctttct ggtgatgact accattctgc cgcaataggt atcgggcaaa atatgctgtg
     1861 gcttggcgcg ctgtcgtttg atgtcacgtg ggccagtagt cactttgata ctcagcagga
     1921 cgagcggggc ttaagctacc gttttaatta cagcaaacaa gtggatgcca ccaacagcac
     1981 gatttccctc gccgcttatc gtttctccga tcgtcatttt cacagctacg ccaactatct
     2041 tgatcacaaa tacaacgaca gcgatgcgca ggacgaaaaa cagacgatca gcttatctgt
     2101 gggccaaccg attaccccac taaacctcaa tctttacgcc aacctgctac atcaaacctg
     2161 gtggaatgca gacgcctcca cgaccgccaa catcacagcc ggttttaatg ttgatattgg
     2221 tgactggaga gatatctcta tttcgacgtc attcaataca acccattacg aagataaaga
     2281 tcgcgacaac cagatttacc tgtcgatttc gctccccttc ggtaacggtg gtcgggttgg
     2341 ctatgacatg caaaacagta gccacagcac cacacaccgc atgtcgtgga acgatacgct
     2401 ggatgaacgt aatagctggg gcatgtctgc cggactgcaa tccgaccgtc cggacaatgg
     2461 agcccaggtg agcggtaact atcagcatct gagttcagcg ggtgagtggg atatttctgg
     2521 tacctatgcc gccaatgatt acagttccgt cagcagcagc tggagcggtt ctttcaccgc
     2581 aacccaatat ggtgcagcgt ttcatcgccg cagctccacc aatgaaccac gcctgatggt
     2641 cagcaccgat ggcgtggcag atattccggt tcagggcaat ctcgactaca ccaaccattt
     2701 tggcattgcg gtggtgccgg tgatttccag ttaccagcct tccaccgtgg cggtgaacat
     2761 gaatgactta cccgacggcg taacagttgc agaaaacgtt atcaaagaaa cgtggattga
     2821 aggcgcgata ggttacaaat cactggcttc ccgttccggt aaagacgtta acgtcatcat
     2881 tcgcaacgcc agcggtcagt ttcctcccct cggagcggat atccgccagg atgacagcgg
     2941 cattagcgtg gggatggttg gcgagaaagg acatgcctgg ttaagcggag tcgctgaaaa
     3001 tcaaaagttt accgtggtct ggggtgatag ccagcattgc tcgctccatc ttcctgaaca
     3061 tatggaagac accgcaaatc gcctgatttt accttgtcat taattaagga aatgaaaatg
     3121 acatttatga aaggactacc ccttttgttg ttggttgcca gtctgtgcag ccacgctgca
     3181 ctacaacccg atcgcactcg tattgtgttt aacgctaatg ataaagctac cagtctgcgg
     3241 gtggataatc gtagcgataa actcccctac ctcgcttatt cctggctcga aaatgaaaaa
     3301 ggggagaaaa gcgatgatct tctggtcgcc ctgccgccga tacaacgtct ggaaccgaaa
     3361 gcaacaacgc aggtacggat agtaaagcaa gcctcgacca caaaattacc gggcgatcgc
     3421 gaaacgctat ttttctacaa tatgcgtgaa attcctcccg ccccggaaaa aaacagcgac
     3481 catgccgttc tgcaagtcgc cattcagagt cgtatcaagg tgttctggcg accggctgca
     3541 ttacgcaaga aagcaggaga aaaggtcgaa ctgcagttac aggtcagcca gcagggcaac
     3601 caactgacac tgaaaaatcc taccgcgtat tatctgacca ttgcctacct gggacgaaat
     3661 gaaaaaggcg ttctccccgg cttcaaaacc gtgatggttg cgccttttag tacggtcaac
     3721 acaaacaccg gaaattatag cggcagccag ttttatctcg gttatatgga tgattacggc
     3781 gcgttacgca tgacgacgct caactgcagc ggacaatgcc atttacaagc cgtggaggcg
     3841 aagaaatgag tgctggcaag ggagtgttgc tcgtcatctg tctgttattt ctgccgttga
     3901 agtctgcgct tgccctgaac tgctactttg gttcatccgg tggctcggta gaaaaatcag
     3961 aagcgattca accttttgct gtaccaggca atgccaaact cggcgataag atttgggaat
     4021 ctgacgatat taaaattccc gtctattgtg acaacaatac caacggcaat tttgaaagtg
     4081 agcatgttta tgcctgggta aacccctacc cgggggtgca ggatcgctat tatcaactcg
     4141 gcgtaactta caatggcgtt gattatgacg ccaaccaggg aaaaagccgc atcgacacta
     4201 accagtgtat tgacagtaag aacattgaca tttatacccc tgagcagatt atcgcgatgg
     4261 gatggcagaa caaaatttgc tcgggtgatc ccgctaatat tcacatgtcg cgtacctttc
     4321 tcgctcgcat gcggttatac gtcaaaatac gagaaatgcc gccgcatgat tatcaaagta
     4381 cgcttagcga ctatatcgtc gtgcaatttg acggtgccgg tagcgttaac gaagatccta
     4441 ctgcccaaaa cctgaaatat catattaccg gtctggaaaa cattcgcgtg ctggattgca
     4501 gcgtcaattt ttccatttca ccggaaacac aggtgattga ttttggtaaa tttaatttgc
     4561 tggatattcg tcgccacaca atgtcgaaaa cattcagtat taagacgaca aaatcacaaa
     4621 atgaccaatg caccgacgga tttaaagtca gttcctcctt ttataccgaa gaaacgttgg
     4681 ttgaagaaga taaagcattg ttgattggta atggtctgaa gctacgtttg ctggatgaaa
     4741 acgcctcgcc ttataccttc aataaatatg ctgaatacgc cgatttcacc agcgacatgt
     4801 tggtctacga aaaaacctat acggctgaac tttcgtccat tgcaggtacc cccatcgagg
     4861 ctgggccctt cgatacagtg gtgcttttta aaattaacta taactgattt gccatgatgc
     4921 cctttgcagc cggaaagggc atctctttca gaaaattgct gattttcccc ttttccttga
     4981 ttgctgttat tttttcctgg cccggctttc tttatgctgt atcgatacac caaagagaaa
     5041 ataatgaggg agcgaaggat gccagttttg cagtggggaa tgttatgtgt gctatcactt
     5101 ctcctttcta ttggtttcct cgcggtacat ctcccggcgg cgctattact tgggccgatg
     5161 atcgccggga tcatcttcag tatgcgcgga attactctgc aacttccccg ctccgctttt
     5221 ctcgccgcgc aggccattct tggctgcatg attgcgcaaa acctcactgg ttcgattctc
     5281 accacgctgg ccgccaactg gccgatcgtg cttgctattt tactggtgac gctgctttcc
     5341 agcgccatcg tgggttggtt attggtgcgc tatagctcac tgcctggaaa taccggtgcc
     5401 tggggttctt ctccaggcgg cgcagcggca atggtcgcta tggcgcaaga ttacggcgca
     5461 gatattcgcc tggtggcgtt tatgcaatat ctgcgagtgc tgttcgtcgc gggggccgct
     5521 gttctggtca cccgcatgat gctgggtgat aacgctgaag cggttaacca gcaaatcgtc
     5581 tggttcccgc cagtgagcat taatctcctg cttacgattt tgctcgcagt cgttgccggt
     5641 acggcgggat gcatgctgcg tcttccttcc ggcacgatgc tcatcccgat gctggcgggc
     5701 gcagtgctcc agtctggtca gctcatcacc atcgaactac cggaatggct gctggcgatg
     5761 gcgtatatgg caattggctg gcggattggt cttggtttcg ataaacaaat cttactgcgg
     5821 gcactacgcc cgctaccgca aatcctgctg tcgatttttg ctctgctggc tatttgtgcg
     5881 ggtatggcgt gggggctgac ccggtttatg catattgatt ttatgactgc ctacctcgcc
     5941 accagtcccg gcgggcttga taccgtggcg gtcatcgccg cagggagcaa tgccgatatg
     6001 gcgcttatta tggcgatgca aaccctgcgc ctgttcagta ttttgctgac ggggccagcc
     6061 attgcgcggt ttatttcaac ctatgcgccg aagcggtcgg cctagtgctg gcagcctgga
     6121 caccagtaaa acgggcgcga ggacaacgtg gttttctcaa tgatgccgcc acagcgttcg
     6181 cacagttcgc catcacgatg aaaaacctta aagcgaaaca gcgccccatg atgcttattc
     6241 tcatccacct gcccccgcgt agcgtaagaa aaccgaggaa tctccagtaa cgcgtgtgcg
     6301 agtgcatcca gttgcgccgc attgagatct ttcgctttat gatttccagt caacccaacc
     6361 tgccagagga tctccacccg caaataattg ccaagcccag ccagaaacgc ctgatcgagc
     6421 agtaatcctg caaactgacg gttacgaaag cgcggtgaca ataaccgttc ctttaccacc
     6481 tccggcgtca gattcggatc cagcacatcg ggaccaacgc gttgtaaaaa cggatgcgtg
     6541 gtcagttgtt ccggcctcaa catctcaata tccgaggcgc tataaagcag aatggttttg
     6601 tcagccgttt gcagttttac ccgcaatact cgcgtggtct gcggctcttc gctggtatca
     6661 accacgcgcc agacgccgta aagctgatta tggctgtaga gcgttaagtc gttggaaaaa
     6721 tgagttaaca acgccttacc acgcgtttcc acatgggtaa cgtgttgacc gataagttgt
     6781 gattgataag tttttaactg cgggaaggca aaccagacat cagttagtgg tttgcctttg
     6841 atcgccgcct ccaggttatc cgctgcacgg cggatctccg ggccttcagg catggtgata
     6901 tccttttttc attctttatt aatcggggtt atgctgcgac aacaatctcc ttttcggcaa
     6961 atgtagagcg tagtcggcgg gcgaacgcca gtgcgtgctc gccgtcgcca tgcaggcaga
     7021 ctgtttgcgc cgtgaccgtt gcccattcgc cggtgatact tttgactctg ccgtgttgca
     7081 ccatctctag cgtttgcgcc agcgcctgtt cttcgttttc aatcaacgcg cctggctgac
     7141 ttcgcggcac cagcgagccg tcagcctgat aaccgcgatc ggcaaacact tcctcgcgcg
     7201 ttgtcaggcc atattgcttg cctgcacgaa tcagctcgct tcctgccagc ccaacgagaa
     7261 ccaatgctgg atcgcaagcg tataccgctc tggcgatggc gtctgccagt tgtgcttctt
     7321 tcgccgcctg gttgtacaac atgccgtgcg gtttgacatg acgcattacg ccgccttgcg
     7381 cacgggcaat cgttgccagc gcgccaattt gatacagcgt ctgggcgtaa acggtttctg
     7441 gcggcaactg catggcgctg cgaccaaaat tttccctgtc gggaaaactc gggtgagcgc
     7501 caattgcaac accatttttt attgcttcac gcacgcaagc ctgcatggtt tgcgcatcgc
     7561 ctgcatgaaa tccacaggca atattggcag aggaaaccag cgttaatagc tctgcgtcgc
     7621 tggcgcagcc ttcgcccaga tcggcgttca ggtcaatttt cattgtgcag ccgccacgct
     7681 aattgttcaa aataacgttg ctgatcttgc cgcgctttca gtgcctcttc cagtgaacac
     7741 tggacaaaat gaatcggctg accgagcgga atttgcgcaa gatggtacat atcagcctca
     7801 atgatgcagg caatacgcgg gtaaccaccg gtggtctgtg cgtcgttcat caacacaatc
     7861 ggctgcccgt tatgtggcac ctgcaccacg cccggtaaca aaccgtgaga taacagttcg
     7921 cgatcggtgg tgcgttttaa aatttgcccc tgtaagcgat agcccatgcg gttactttgc
     7981 gagctaagct gccagggcga acgccagaat gcatcctgcg aggcacgatc gaactcatga
     8041 tattccggcc ccggcaaggc gcgaatgcgg ttgccccaca gcagctgttt aacgccctgc
     8101 gcttccataa aatcacgctt cgctttgcca atcgggagtc ggtcaccatc cttcagtaaa
     8161 cggccttcca gcccgccaat ccccactttg agatcggtgc tgcatgaccc cattaccggc
     8221 ggaacatcaa taccacccgc gaccgccaga taactgcgca tcccgtgctg cgggcgttta
     8281 agcgttaaac gctggcctgc tttcatcggc aatcgccagc cggtccagac ggcattatca
     8341 tccagccgcg cttcgcaacc ggcacccgtc agagcaaacc acccatcagt ttcgaactca
     8401 acagttaact gaccgagcgt gatctccagc gcgggggcat tggcgtcatt acccaccagt
     8461 aggttagcaa tgcgtaacgc gggcatatcc agtgcgccgc agtggctgat acccgactgg
     8521 cgaaaaccgt gacgaccgcc atcctgcaca gtggtataca tgcccgcacg aataatcttc
     8581 agcatactcc ctccttctgc ggtacaaagc gcacgctgtc tcccggacgt aataagatgg
     8641 gttcgtcacg cgccggatca aacaggctga gtgaggtatg accaatcaac tgccagccac
     8701 ccggcgttgc cagcggataa acaccagtct gcggcccgcc gatcccgaca gaacctgccg
     8761 gaacgagtaa gcgcggttca gcgcgccgtg gcgtgtgtag ttgttccggc aaactcccga
     8821 gatacgggaa gcccggttga aaacctaaaa accagaccac gtattccacg gaggagtgca
     8881 attcaacaac ctgtttttcg ctcaacccgc aatgcgccgc gaccaccgcc aaatccggtc
     8941 cgcctgcacc accgtaaacc accggaattt caataaagcg agactcaggt tccagggcct
     9001 cgctctcctc ccaccagcgt tgcaaacgct ctatggcatc cagcgccagc gactcaggat
     9061 tacgcaaaat caccgtaata ttgttcatgc cgggaatggc ttcaaccaca ttcggcatat
     9121 ccaccagacg ctgcgccagt cgccagatcc gtttctggct agccagcgtc accggcggtt
     9181 ccagttccag cactaccgcc gtttcaccta tcagataaca acgcgctcgt tgcactttcg
     9241 atccctctga ttattcgtta tgcaggatta ggaatatcaa taaaggtcac atcaagatcg
     9301 gtattttcat tcagccactc gctcaatgcg cgaataccac cacgttcagt ggcatggtga
     9361 cctgcagcat aaaaatgcaa tccctgctcg cgggctgaat gaatggtctg ttcagaaact
     9421 tcgccagtaa taaaagcatc cacgccaaaa cgcgcggcgc tatcgataaa actttgcccg
     9481 ccgcccgtgc accaggcgac gcgctggacc acctcaggtc cggtatcgcc acaccataac
     9541 ggcttacgtc ccagacgcgc ttcaatccag gaggctagtt ccagtcccgg cacaggcatg
     9601 gtcagctctc cccacggcac caacggctca atttcgccca tgaccgtgat ccccagtaac
     9661 gccgccagct gtgcgttatt gcccagctca ggatgtgcgt caagcggcaa atgccagcca
     9721 tacaggttga tatcattcgc cagcaacgtt tttaaacggt tacgcttcat tccgcgaatg
     9781 accggagact ctcctttcca gaagtagcca tgatgcacaa tgaccgcatc cgcgcccaga
     9841 cgcactgcct catcgagcaa agcctggctg gcggtgacac cggtaacaat tttttgcacc
     9901 gtctctttgc cttccacctg caaaccattc ggcgcgtaat cactaatcgc cgcgctgttc
     9961 agtttttcgt taatcagttg ttccagttcg gtgtttttca tcttcgcgcc ttccgtattc
    10021 tgatagctac accgttaaca tagcgttacc tcgccagttc gtcgatagcc aatcttttga
    10081 catattaaga aacaaacccg acgccaaaag acgcaaattg tttatatcat cacgcttcag
    10141 ctaatgtata tttatgcaat cagacagcat attgcataaa taatcagatc tgtatcaaag
    10201 ttttaacttt aaggaaacac aagcacgccg cgcaactatt acgtgacgtt gccgtcaatt
    10261 gtggaattat tatgaataaa cacgcatcac agccgcgcgc tatttactat gtcgttgcgc
    10321 tgcaaatctg ggaatatttt agcttttacg gcatgcgtgc cctgctgatt ctctatctca
    10381 ccaatcaact aaaatacaac gatactcacg cctacgagtt atttagcgcc tactgttcgc
    10441 tggtgtatgt cacgccaatc ctcggtggct ttttggcgga taaagttctc ggcaatcgca
    10501 tggcggtgat gctgggggcg ttattgatgg cgatcggtca tgtggtgttg ggtgccagtg
    10561 agatccatcc gtcattcctc tatctgtccc tggcgataat cgtttgtggc tatggtctgt
    10621 ttaaatccaa tgtcagttgc ctgctcggcg agctgtatga gccaaccgat ccgcgtcgtg
    10681 atggcggttt ctcgctgatg tatgcggcgg gtaacgtggg gtctattatc gcacctatcg
    10741 cctgtggtta cgcccaggaa gagtacagct gggcgatggg ctttggcctg gcggcggttg
    10801 gcatgatcgc gggtctggtc attttcttat gtggcaatcg tcatttcact catacccgcg
    10861 gcgttaataa aaaagtactg cgtgcgacaa actttctcct gcctaactgg ggatggctgc
    10921 tggttctgct ggtggcaacg cctgcgctga ttaccgtatt gttctggaaa gagtggtcgg
    10981 tatacgcctt aattgtcgcg actattattg gcctgggtgt actggcaaaa atttatcgca
    11041 aagcagaaaa ccagaaacag cgtaaggagc tggggctgat tgtgacgctc accttcttca
    11101 gtatgttgtt ctgggccttc gcacaacagg gcggcagctc gattagcctt tatatcgacc
    11161 gcttcgttaa ccgcgatatg tttggttata ccgttccgac tgctatgttc cagtcgatta
    11221 atgccttcgc agttatgctg tgcggtgtgt tcctggcgtg ggtggttaaa gaaagcgtcg
    11281 caggtaatcg taccgtgcgc atctggggaa aatttgctct tggtctcggc ctgatgagcg
    11341 ccgggttctg cattctgacc ttaagcgccc gctggtccgc aatgtatggt cactcttctc
    11401 tgccactgat ggtattaggc ctggcggtga tgggctttgc ggaactgttt atcgacccgg
    11461 ttgccatgtc gcaaattacg cgcattgaaa ttccgggcgt gaccggcgta ttaaccggca
    11521 tctacatgct gctttctggc gcgatcgcga actatctggc gggcgtgatt gccgatcaga
    11581 catcgcaggc ttcgtttgat gcttccgggg cgatcaacta ctccatcaat gcatatattg
    11641 aagtatttga tcaaattacc tggggcgcac tggcgtgtgt aggactggta ctgatgattt
    11701 ggctgtatca ggcgctgaaa ttcagaaacc gcgcgctggc gctggagtca taataggcca
    11761 gcaccatacc tgataaaacg ctcgctgcgt tttatcaggc tcctttcctc gcttcttcgt
    11821 acgctgccag cgttcgcagc cttgcctctt tgtgatcaac tatcggttgc ggataatcca
    11881 gcttcacacc tgctttctgc gcccacttcc acggctcatg caccgctttc cctggtacat
    11941 cgcgcagctc cggtaaccat cgacgaataa actcgccctc acggtcaaat ttctcgccct
    12001 gagttatcgg attgaaaata cgaaaatacg gcgcagcatc agtacccgta gaagccgccc
    12061 actgccagcc accgttatta gctgccaaat caccatcaat cagctgcgac atgaaatatc
    12121 gctcgccttc gcgccagtcg atcaacaaat ctttcaccag aaaactggct gtaatcatcc
    12181 gtagccggtt atgcatccag ccagtgctgt taagctgacg catagcggca tcaacaatcg
    12241 ggtatcccgt tttgcctttc tgccaggcct gtaaatgtgc gggattgctt tgccactgca
    12301 cacgatccgt ccaggcaata aatggacgat gtttacacaa cgaggggtaa tacgtcatca
    12361 gatgacggta gaactcgcgc cagatcagct cactaagcca gacactaccg gccccaccgt
    12421 ccagcgcctg cggctgttca gccaacaagc gatgcaagca ctggcgaggc gataacccgc
    12481 ccgttgccag gctggccgac aaacggctgg tgccttccac tgccggaaaa tctcgttgtt
    12541 gctcataatc tccggcaccg ttctggcaaa actggcgtaa ttgcgcaatc gccgcttttt
    12601 cttccaccgg aaaatgcgca gtatcgaaag actgacgagg ataattcagc gtaatggatg
    12661 gcgagggctc tatcgatccg ctactacgaa cttttggtgc agcgacgcac tccggcatcc
    12721 cttcccgcag ccgtttcagc caggcattct taaaaggcgt aaagactttg tacatctcgt
    12781 gattgccggt catcaccgcg ccaggcggca ggatcacgct gtcatcaaat ccttcacaca
    12841 ccacgttacg cagcgctctt tcaacttcca catcccgcgc ccgctcattc acttcatact
    12901 gatagttata aaacaggtgg gtaacgctgt tttccgcgca cacctgttta actatttcga
    12961 cactggcgac aaagtcatcc acttcacgga acaataaagg aatacctttt tccgcaagcg
    13021 ctatttgtag cccattcagt tgagcattga taagttcagc ctgacgcggc gacatgttat
    13081 gcgtcgccca ctggcgtggt gtagcgatat ataacgccag cacgcgtgca gacgaattgc
    13141 ggcaggcggc agccagtgcg agattatcgt gcagacgtaa atcctggcga aaccagacca
    13201 gatgggtaat cataaaactc ctgaatggcg caagttaatc acacgcggcc aaagttcgaa
    13261 ataacgctgc cctgaaagcc aggcgtcagg ataaagcgcc atatagtgtt tgatacgcat
    13321 cagcggcgca agaagtggtt gctcgccacg gcgataactg tcgataagcg ccgccaactg
    13381 ctggcgttct gtggaatcaa tatgcgggcg aaaataaccc tgaacgtgca tcaaaacgtt
    13441 ggtgtgatcg cgcgggttgg cgggatgaga aagcaaaaca attacgcgtt ggtagtactg
    13501 gttgtaaaaa tcatccagat tttgccactg gtgaatatca gccacgaacg ggccaagttt
    13561 gcggtactcc ggctgagaat gcgccagaaa gacgagttta tagcggctgt gataatcgag
    13621 aagcgccccg cgcgttaagc catgttcttt cagtcgatgt aactcatgaa gggcgaagat
    13681 acggattagg gtgctgtcat caaatcgttg ctgattcatt actgctcctg aacggtttac
    13741 aggagtaagt gtagacgttg agaaatgata tttgtgaagt taatcctgtt gtagcaggac
    13801 aaatttacga aagcctgctc cccgcaagga ctgacgtcag gtagtttcta accatagctg
    13861 ccctttctat tcaaacgtga aatcaataag ctcatcaggg acatcgcaaa caatatgaag
    13921 acgggtttct tctctgccgt gactcttttc actaattgcg taactgtcat gcttgggatt
    13981 atttaattct ttcagcggaa atttttcctc gaaggcttta tttagccgcc cctggtttcc
    14041 ttttacagcg aataaataat cacctccctg tttttgtatc ttctctgcaa tatctttctg
    14101 gcaacccatc gcatcggttg tgatgatttt tcctttaata tccagcatgt taagaagttc
    14161 agggatagct gtgatctcat tggatttctt atccgtcttg atctgcccga tgaccagact
    14221 gtgcattgtt gagaacgcac taatgacatg aatcgctccc ctgcggcgac tcttgtcata
    14281 agagtgccgg agcgtttttc catcaattgc aatgacgtct ttatcatttg atgaatggca
    14341 atcacgcatc cagttaataa agcactcgtg aaattttgca ggactgatac aggatacaac
    14401 tctggcaata gtatcgtgaa caggaatacc attttcaaaa tcaccatatt gcttcaagaa
    14461 atcgagatgt gtttcccc
//
LOCUS       DAPGWB010000113        14360 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.114, whole genome shotgun sequence.
ACCESSION   DAPGWB010000113 DAPGWB010000000
VERSION     DAPGWB010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14360)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14360)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14360
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.114"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            329..1900
                     /gene="garD"
                     /locus_tag="RHX79_003272"
     CDS             329..1900
                     /gene="garD"
                     /locus_tag="RHX79_003272"
                     /EC_number="4.2.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactarate dehydratase"
                     /protein_id="HDV2198408.1"
                     /translation="MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLE
                     LIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTL
                     PLATKVPAPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDL
                     LPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKL
                     QPERLLVGTDDVQAIPVESASIVSLQDEKHVGFQSMVEDILQVAERHLQKLNQRQRET
                     CPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTP
                     RAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGK
                     SAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVP
                     VIKMATRTELANRWFDLMDINAGTIATGEETIEEVGWKLFHFILDVASGKKKTFSDQW
                     GLHNQLAVFNPAPVT"
     gene            2049..2384
                     /gene="prlF"
                     /locus_tag="RHX79_003273"
     CDS             2049..2384
                     /gene="prlF"
                     /locus_tag="RHX79_003273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin PrlF"
                     /protein_id="HDV2198409.1"
                     /translation="MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHY
                     EILPGGQVFMCRLGDEQEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVN
                     IDDEIGDDE"
     gene            2384..2848
                     /gene="yhaV"
                     /locus_tag="RHX79_003274"
     CDS             2384..2848
                     /gene="yhaV"
                     /locus_tag="RHX79_003274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ribonuclease
                     toxin YhaV"
                     /protein_id="HDV2198410.1"
                     /translation="MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKA
                     ATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEK
                     EKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWESLTQETEENH"
     gene            complement(2903..3712)
                     /gene="agaR"
                     /locus_tag="RHX79_003275"
     CDS             complement(2903..3712)
                     /gene="agaR"
                     /locus_tag="RHX79_003275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aga operon transcriptional regulator AgaR"
                     /protein_id="HDV2198411.1"
                     /translation="MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVS
                     TVTIRNDLAFLEKQGIAVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVE
                     LIQPGHRVILDSGTTTFEIARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLR
                     RQSQSFYGDQAEQSLQNYHFDMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERII
                     VVTDSSKFNRSSLHKIIDTQRIDMIIVDEGIPADSLEGLRKAGVEVILVGE"
     gene            3961..5241
                     /gene="kbaZ"
                     /locus_tag="RHX79_003276"
     CDS             3961..5241
                     /gene="kbaZ"
                     /locus_tag="RHX79_003276"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit KbaZ"
                     /protein_id="HDV2198412.1"
                     /translation="MKHLTEMVRQHKAGKTNGIYAVCSAHPLVLEAAIRYASANQTPL
                     LIEATSNQVDQFGGYTGMTPADFRGFVCQLADSLNFPQDALILGGDHLGPNRWQNLPA
                     AQAMANADDLIKSYVAAGFKKIHLDCSMSCQDDPIPLTDDIVAERAARLAKVAEETCR
                     EHFGEADLEYVIGTEVPVPGGAHETLSELAVTTPDAARATLEAHRHAFEKQGLNAIWP
                     RIIALVVQPGVEFDHTNVIDYQPAKASALSQMVENYETLIFEAHSTDYQTPQSLRQLV
                     IDHFAILKVGPALTFSLREALFSLAAIEEELVPAKACSGLRQVLEDVMLDRPEYWQSH
                     YHGDGNARRLARGYSYSDRVRYYWPDSQIDDAFAHLVRNLADSPIPLPLISQYLPLQY
                     VKVRSGELQPTPRELIINHIQDILAQYHTACEGQ"
     gene            5264..5737
                     /gene="agaV"
                     /locus_tag="RHX79_003277"
     CDS             5264..5737
                     /gene="agaV"
                     /locus_tag="RHX79_003277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312038.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylgalactosamine transporter subunit
                     IIB"
                     /protein_id="HDV2198413.1"
                     /translation="MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQ
                     QNLMEMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRI
                     NVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTEPAVDLFKLL"
     gene            5748..6527
                     /locus_tag="RHX79_003278"
     CDS             5748..6527
                     /locus_tag="RHX79_003278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS
                     mannose/fructose/sorbose/N-acetylgalactosamine transporter
                     subunit IIC"
                     /protein_id="HDV2198414.1"
                     /translation="MEISLLQAFALGIIAFIAGLDMFNGLTHMHRPVVLGPLVGLVLG
                     DLHTGILTGGTLELVWMGLAPLAGAQPPNVIIGTIVGTAFAITTGVKPDVAVGVAVPF
                     AVAVQMGITFLFSVMSGVMSRCDRMAENADTRGIERVNYLALLALGTFYFLCAFLPIY
                     FGAEHAKTIIDVLPQRLIDGLGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAW
                     LKLPVLAIAAAALAMALIDLLRKSPEPTQPAAQKEEFEDGI"
     gene            6517..7395
                     /locus_tag="RHX79_003279"
     CDS             6517..7395
                     /locus_tag="RHX79_003279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019079236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter family
                     subunit IID"
                     /protein_id="HDV2198415.1"
                     /translation="MASNQTTLPNVSENEETLLTGVNENVYEDQSIGAELTKKDINRV
                     AWRSMLLQASFNYERMQASGWLYGLLPALKKIHTNKRDLARAMKGHMGFFNTHPFLVT
                     FVIGIILAMERSKQDVNSIQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGS
                     ILGAVVFIVLFNVVHLGLRFGLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGA
                     LVATYVRLSTTLEITAGDAVVKLQADVIDKLMPAFLPLVYTLTMFWLVRRGWSPLRLI
                     AVTVVLGIVGKFCHFL"
     gene            7413..7847
                     /locus_tag="RHX79_003280"
     CDS             7413..7847
                     /locus_tag="RHX79_003280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDV2198416.1"
                     /translation="MLSIILTGHGGFASGMEKAMKQILGEQSQFIAIDFPETSSTALL
                     TSQLEEAIAQLDCEDGIVFLTDLLGGTPFRVASTLAMQKPGCEVITGTNLQLLLEMVL
                     EREGLSGEEFRVQALECGHRGLTSLVDELGRCHEECPVEEGI"
     gene            7844..8977
                     /gene="nagA"
                     /locus_tag="RHX79_003281"
     CDS             7844..8977
                     /gene="nagA"
                     /locus_tag="RHX79_003281"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDV2198417.1"
                     /translation="MTHVLRARRLLTEEGWLDDHQLRIADGVIAAIEPIPVGVTERDA
                     ELLCPAYIDTHVHGGAGVDVMDDAPDVLDKLAMHKAREGVGSWLPTTVTAPLNTIHAA
                     LKRIAQRCQRGGPGAQVLGSYLEGPYFTPQNKGAHPPELFRELEIAELDQLIAVSQHT
                     LRVVALAPEKEGALQAIRHLKQQNVRVMLGHSAATWQQTRAAFDAGADGLVHCYNGMT
                     GLHHREPGMVGAGLTDKRAWLELIADGHHVHPAAMSLCCCCAKERIVLITDAMQAAGM
                     PDGRYTLCGEEVQMHGGVVRTASGGLAGSTLSVDAAVRNMVELTGVTPAEAIHMASLH
                     PARMLGVDGVLGSLKPGKRASIVALDSGLHVQQIWIQSQLASF"
     gene            9328..10482
                     /locus_tag="RHX79_003282"
     CDS             9328..10482
                     /locus_tag="RHX79_003282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AgaS family sugar isomerase"
                     /protein_id="HDV2198418.1"
                     /translation="MPKNYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNF
                     LEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPA
                     HPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALL
                     MPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGV
                     FGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDNET
                     LVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESTDIVAAGPHIILPPSRHFI
                     DVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA"
     gene            10495..11355
                     /gene="kbaY"
                     /locus_tag="RHX79_003283"
     CDS             10495..11355
                     /gene="kbaY"
                     /locus_tag="RHX79_003283"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit KbaY"
                     /protein_id="HDV2198419.1"
                     /translation="MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSP
                     VILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAM
                     IDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEA
                     KRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFV
                     RRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKIN
                     VCGSANRISA"
     gene            11522..11998
                     /gene="agaB"
                     /locus_tag="RHX79_003284"
     CDS             11522..11998
                     /gene="agaB"
                     /locus_tag="RHX79_003284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylgalactosamine transporter subunit
                     IIB"
                     /protein_id="HDV2198420.1"
                     /translation="MSSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDD
                     IQQKLMGITAETYGFGIRFFTIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDL
                     KDVNVGNMHFSEGKKQISSKVYVDDQDLADLRFIKQRGVNVFIQDVPGDQKEQIPD"
     gene            12037..12840
                     /gene="agaC"
                     /locus_tag="RHX79_003285"
     CDS             12037..12840
                     /gene="agaC"
                     /locus_tag="RHX79_003285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylgalactosamine transporter subunit
                     IIC"
                     /protein_id="HDV2198421.1"
                     /translation="MHEITLLQGLSLAALVFVLGIDFWLEALFLFRPIIVCTLTGAIL
                     GDIQTGLITGGLTELAFAGLTPAGGVQPPNPILAGLMTTVIAWSTGVDAKTAIGLGLP
                     FSLLMQYVILFFYSAFSLFMTKADKCAKEADTAAFSRLNWTTMLIVASAYAVIAFLCT
                     YLAQGAMQALVKAMPAWLTHGFEVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVC
                     YIQVSNLLPVAVLGAGFAVYEFFNAKSRQQAQPQPVASKNEEEDYSNGI"
     gene            12830..13621
                     /gene="agaD"
                     /locus_tag="RHX79_003286"
     CDS             12830..13621
                     /gene="agaD"
                     /locus_tag="RHX79_003286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708938.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylgalactosamine transporter subunit
                     IID"
                     /protein_id="HDV2198422.1"
                     /translation="MGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKK
                     IYKDDKPGLSAAMKDNLEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPI
                     AGIGDAIFWFTLLPIMAGICSSFASQGNLLGPILFFAVYLLIFFLRVGWTHVGYSVGV
                     KAIDKVRENSQMIARSATILGITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFDK
                     VFPNILPMAYTLLMYYFLRVKKAHPVLLIGVTFVLSIVCSAFGIL"
     gene            13622..>14360
                     /locus_tag="RHX79_003287"
     CDS             13622..>14360
                     /locus_tag="RHX79_003287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactosamine-6-phosphate isomerase"
                     /protein_id="HDV2198423.1"
                     /translation="MERGTASGGASLLKEFHPVQTLQQVENYTALSERASEYLLAVIR
                     SKPDAVICLATGATPLLTYHYLVEKIHQQQVDISQLTFVKLDEWVDLPLTMPGTCETF
                     LQQHIVQPLGLREDQLISFRSEEINETECERVTNLIARKGGLDLCVLGLGKNGHLGLN
                     EPGESLQPACHISQLDARTQQHEMLKTTGRPVTRGITLGLKDILNAREVLLLVTGEGK
                     QDATERFLTAKVSTAIPASFLWLHSNFI"
BASE COUNT         3470 a         3617 c         3751 g         3522 t
ORIGIN      
        1 ggtgttattt atgagtttca tttatgccgt aacggcaatg aactcgggaa ttagtataag
       61 cagcgcgaga ataataatca ttgtgcaaat gctaatttaa ttaatactat ttaaatatta
      121 ttttgagcat atgcacataa ggttgcgcgc taaagcacag atttgcgctt taccttgccg
      181 ggcggcactg caatccctga aatgattgac attgatcaca tttctgcgtt taaactcctg
      241 acattcttat ttcacccaat gaagtcattt atttttaaat gagaccaggt cctcatttta
      301 ataacccctg gctggagaat attgcacaat ggccaacatc gaaatcagac aagaaacgcc
      361 aactgcgttt tatataaaag ttcacgacac agataatgtg gcaattattg ttaatgataa
      421 tggcctgaaa gcaggaacgc gttttccgga tgggctggaa ttaattgaac atattcccca
      481 ggggcataaa gtcgcattgc tggacattcc ggctaatggt gaaattattc gttatggcga
      541 agtgattggt tacgccgtgc gtgcaatccc acgcggaagc tggatcgacg aatcaatggt
      601 tgtactaccg gaagcgccgc cgttacacac gctgccactg gcaaccaaag tcccggcccc
      661 cttaccgccg ctggaaggat acacctttga gggctatcgc aatgccgatg gcagcgtggg
      721 caccaaaaac ctgctcggca tcaccaccag cgtccactgt gtggcaggcg tggtggacta
      781 tgtagtaaaa atcattgaac gcgatctgct accgaaatac ccgaacgtcg atggcgtggt
      841 ggggctgaat catttgtacg gctgtggcgt ggcgattaac gcaccggcgg cagttgtgcc
      901 tattcgtacc atccacaata tttcgctgaa ccctaacttt ggcggcgaag taatggtgat
      961 tggtctgggt tgtgaaaagt tgcagcctga gcgcctgctg gtcggcacgg atgatgtgca
     1021 agctattcca gtagaaagcg ccagcattgt cagtttgcag gatgaaaagc atgtcggttt
     1081 tcagtccatg gtcgaggata ttttgcaggt cgccgaacgc catctacaaa aactgaatca
     1141 acgtcagcga gaaacctgtc cggcttcaga actggttgtc ggcatgcagt gcggtggcag
     1201 cgatgccttt tctggcgtaa cggcaaaccc ggcggttggc tatgcgtctg atctactggt
     1261 gcgctgcggc gcaacggtga tgttctcaga agtcacggaa gtgcgtgacg cgatccatct
     1321 gctgacacca cgcgcagtga acgaagaggt cggcaaacgg ctgctggagg agatggagtg
     1381 gtacgataac tatctcaata tgggaaaaac cgaccgcagc gccaaccctt cgccgggcaa
     1441 caagaaaggc ggtctggcaa acgtggtaga gaaggcactc ggctccattg ctaaatcggg
     1501 taaaagcgca attgttgaag tgctgtcgcc cggtcaacgc ccgactaaac gcggattaat
     1561 ttacgccgcg acgccagcca gcgattttgt ctgtggcacg caacaggtgg cttcgggtat
     1621 caccgtgcaa gtgtttacga ccggtcgtgg tacgccgtac ggcctgatgg cggtacccgt
     1681 cattaaaatg gcgacccgca ccgagctggc gaaccgctgg tttgatttaa tggatattaa
     1741 cgcgggcact atcgccaccg gcgaagaaac cattgaagag gtgggctgga agttgttcca
     1801 ctttattctc gacgtcgcca gcgggaagaa gaaaaccttc tcggatcaat gggggctgca
     1861 taaccagctg gcagtgttta acccggcacc ggtgacctga tttcttttgg aacgtccctc
     1921 gcaaaacatg gccttagtgc catgttttta ttgtttaaag cccccacgtc cattaataat
     1981 gcatttgcat taccttagtt caagcttata atttgagcag aaaacaggct gtaaaaggac
     2041 agtgaatcat gcccgctaat gctcgctctc acgctgtact gaccactgaa tcaaaggtca
     2101 cgatacgcgg acaaacaact atccccgcgc cagtgcgtga ggccttaaaa ctgaagccag
     2161 gccaggacag cattcattac gaaattctgc ctggtgggca agtctttatg tgccgactgg
     2221 gagatgaaca ggaggatcat actatgaatg catttttgcg ttttctggat gcagatatcc
     2281 agaacaaccc gcaaaaaact cgtccattca acattcaaca aggaaagaaa cttgtcgctg
     2341 gcatggacgt caacattgat gatgagattg gcgacgacga ataatggatt ttccacaaag
     2401 ggttaatggt tgggcgctat atgctcatcc ctgttttcag gaaacctacg acgctttagt
     2461 tgccgaagtc gagacattaa agggaaaaga tcctgaaaat tatcagagaa aagccgccac
     2521 aaagttattg gcggtagtcc ataaagtgat tgaggagcat atcacggtca atccatcatc
     2581 accggcattc cgtcatggca agtcgttagg ctctgggaaa aataaagact ggtcacgggt
     2641 aaaatttggt gctggtcgtt atcgtctctt ctttcgttat agtgaaaaag agaaagtcat
     2701 cattctggga tggatgaacg atgaaaacac tctgcgcacc tacggtaaaa aaacagatgc
     2761 ctataccgta ttcagcaaaa tgttaaaaag aggacatcct cctgccgact gggaaagcct
     2821 cacccaagag acagaagaaa accattgatg gtgttcacaa tgcccgccga acgtattcgt
     2881 gttgaccagc gggcaccctt tctcactccc cgaccagaat cacttcaacc ccagcctttc
     2941 gcagtccttc cagactatcc gcaggaatgc cttcatcaac aatgatcatg tcgatacgtt
     3001 gagtatcaat gatcttatgt aaactggaac gattgaattt actggaatcg gtgaccacga
     3061 tgatccgttc cgcaacttcg cacatccgac ggtttaaacg ggcttcatct tcattatgtg
     3121 tgctgacgcc gcgctccaga tcgatcgcat ctacaccaag aaacagcata tcgaagtggt
     3181 aattttgcag cgattgctca gcctgatcgc cgtaaaaaga ttgcgactga cggcgcaaat
     3241 gcccgccggt catcagcagc tcaacgcctt cggcttccag caacgcatta gccacgttca
     3301 taccgttggt catcgcaatt acgtcagtgt gcttgcgcat cagacgagca atctcaaaag
     3361 tggtggtccc ggaatcgagg atcacccgat gacctggctg aatcaactca acggcagctt
     3421 tcgcaacgct gcgtttcatc gcggtgttca gtgcgctttt atcttccact gatggctcga
     3481 ctgacggcgt cgtgctatcg cagatcaacg cgccaccata ggcacgcaca gcgatcccct
     3541 gcttttccag aaacgccaga tcgttgcgga tcgtcacagt agatacgcca tacaatgccg
     3601 acagatcgtt aacctgcaca ctcccttgct gtcgcagacg ctgaatgatc tgttctcgtc
     3661 gctcgctggt gccagtcact cgcttctcac ctgaagcgtc ggtattactc atagtaagtc
     3721 ctttcgtaaa actttcgttt catttcgttt tgcctattaa cgcctttcta ttaagcaaat
     3781 gcaagcccac cttgcccatt gacgcaagct actctcgttt cagtgacttt cattatgttt
     3841 cttttgtgaa tcagatcaga aaactattat ctttcgtttt atttttatct caccatgacg
     3901 cagtatcaac tgaaacaaaa cgaaagatta atatcgcagt aatctgaact ggagaggaaa
     3961 gtgaaacatc tgacagaaat ggtgagacag cacaaagcgg gcaaaacaaa tggaatttat
     4021 gccgtttgtt ccgcacatcc gctggtgctg gaggctgcaa tccgctacgc cagtgcaaac
     4081 caaacgccgt tactgattga agcaacctcc aatcaggtag accagttcgg cggttatacc
     4141 ggaatgacgc ccgccgattt tcgcggcttt gtttgtcagc tcgccgactc gttgaatttc
     4201 ccgcaggatg cgttgattct gggtggtgac catctggggc caaaccgctg gcaaaacctg
     4261 ccggccgctc aggcaatggc caatgccgat gatttgatta aaagctacgt tgcggcagga
     4321 ttcaaaaaaa tccaccttga ttgcagcatg tcctgtcagg acgatccgat tcccttaact
     4381 gatgacatcg tggctgaacg cgccgcccgt ctggcgaaag tggcggaaga aacctgtcgc
     4441 gaacactttg gcgaagccga tctggagtat gtcattggta ccgaagtgcc ggtacctggc
     4501 ggcgcgcatg aaaccttaag cgagctggcg gtcaccacgc cggatgccgc ccgcgccacg
     4561 ctggaagccc atcgtcacgc ctttgaaaag caaggtttga atgccatctg gccacgcatc
     4621 attgccctgg tggttcaacc cggcgtcgaa ttcgatcaca ccaacgttat tgattatcag
     4681 cccgccaaag cgagcgcctt aagccagatg gtcgaaaact acgaaacgct gattttcgaa
     4741 gcgcactcta ccgattatca aacgccgcaa tcgctgcgcc agctggtgat tgaccacttt
     4801 gccattctga aagttggccc ggcgctgacc ttctccctgc gtgaagccct tttttctctg
     4861 gcggcgattg aagaagaact ggtaccagcg aaagcctgtt ctggtctgcg tcaggtgctg
     4921 gaagacgtga tgctcgaccg cccggaatac tggcaaagcc actaccacgg tgacggcaac
     4981 gcgcgtcgtc tggcgcgtgg ttatagctac tcggatcgcg tgcgctatta ctggccggac
     5041 agccagattg atgacgcttt cgctcatctg gtacgtaatc tggcggattc accaattccg
     5101 ctaccgctca tcagccagta tctgccgctg caatacgtga aagttcgctc cggcgagctg
     5161 caaccgacgc cacgggaact cattatcaac catattcagg acatcctggc gcagtaccac
     5221 acagcctgtg aaggccaata agcaaaacaa agaggaacac gctatgccaa atattgtttt
     5281 aagccggatt gatgaacgct tgattcacgg tcaggtcggc gttcaatggg tcggatttgc
     5341 gggggcaaat ctggtgctgg tagccaacga tgaggttgcc gaagatccgg tacaacaaaa
     5401 cctgatggaa atggtactgg cagaagggat cgccgtacgt ttctggacgc tgcaaaaagt
     5461 tatcgacaac attcatcgcg ccgccgatcg acagaaaatc ctgctggttt gtaaaacacc
     5521 cgccgatttc ctgacgctgg tgaaaggtgg cgttccggtg aatcgcatta acgttggcaa
     5581 tatgcactac gccaatggca agcaacaaat cgccaaaacg gtttctgtgg atgcgggcga
     5641 tatcgcagca tttaacgacc tgaaagccgc tggggtggaa tgcttcgttc agggcgtccc
     5701 gacagagcct gctgtggacc tctttaaatt actttgaggg attcatcatg gaaatcagtc
     5761 tgttgcaggc attcgcgttg ggcattatcg cctttatcgc tggcctggat atgtttaacg
     5821 gcttaaccca tatgcaccgc ccggtggtcc tcggcccgtt agtcgggctg gtacttggcg
     5881 atctgcatac cggtatttta accggcggta cgctggaact ggtgtggatg gggctggccc
     5941 cgctggcggg cgcacagccg cctaacgtga ttatcggtac tatcgtcggc acggcgtttg
     6001 ccattactac tggcgtgaaa cccgatgtcg cagtcggtgt cgccgtacct ttcgctgtcg
     6061 cagtacagat ggggattacc ttcctgttct cggtgatgtc cggcgtgatg tctcgctgcg
     6121 accggatggc ggagaacgcc gatactcgcg gcattgaacg cgtgaactat ctggcactgc
     6181 tggcactcgg cactttctat tttctctgcg ctttcctgcc tatctacttc ggcgcggaac
     6241 atgcaaaaac catcattgat gtcctgccgc aacgattaat cgacggcctc ggcgtcgcgg
     6301 gcggcatcat gccagcaatc ggttttgccg tgctgctgaa aatcatgatg aaaaatgtct
     6361 acatccccta cttcatcctg ggctttgttg ccgcagcctg gctcaagtta ccggtgctgg
     6421 ctattgctgc cgccgcgctg gcgatggcgc tgatcgatct gctgcgtaaa tctcctgaac
     6481 cgactcaacc tgcggcacag aaagaggaat ttgaagatgg catctaatca aaccaccctg
     6541 ccgaacgtca gtgaaaacga agaaacattg ctgactggcg tcaatgaaaa cgtgtatgaa
     6601 gatcagagca ttggcgcgga gctgacgaaa aaagatatca accgcgtcgc ctggcgttcc
     6661 atgctgttac aagcgtcttt taactacgaa cgtatgcagg cttctggctg gttgtacggt
     6721 ctgctgcctg ctctgaaaaa gatccacact aataaacgcg acctggcgcg cgccatgaag
     6781 gggcatatgg gtttcttcaa tacccatccg tttctggtga catttgttat cggcattatc
     6841 cttgcgatgg agcgttctaa gcaggacgtt aacagtattc agagcaccaa aattgccgtc
     6901 ggtgcgccgc tcggcgggat tggcgatgca atgttctggc taacgctact gccgatttgt
     6961 ggcgggattg gagccagtct ggcattgcaa ggctccattc ttggcgcagt cgtctttatt
     7021 gtgctgttca acgtggtaca cctggggctg cgttttggtc tggcgcatta tgcttaccgc
     7081 atgggcgtgg cggcgattcc actgattaaa gcgaatacca aaaaagtcgg ccatgctgcg
     7141 tctatcgttg ggatgacggt aatcggtgcg ctggtggcaa cctatgttcg tttaagcacc
     7201 acgctggaaa tcacagcggg cgacgcagtg gttaagttac aggctgatgt tatcgacaaa
     7261 ctgatgcctg ctttcttacc gttggtctac accctgacca tgttttggtt ggtacgccgc
     7321 ggctggagtc cgctgcgtct gattgcagtt accgtggttc tcggcatcgt tggtaaattc
     7381 tgccatttcc tttaaataca atgaggtatt agatgttaag tattattttg acagggcatg
     7441 gcgggtttgc cagcggcatg gaaaaagcaa tgaagcaaat tctcggtgag caatcgcagt
     7501 ttatcgccat cgattttccg gaaacctcaa gcaccgcgct gcttacatcg cagcttgaag
     7561 aggccatcgc ccaactggat tgtgaagacg gcattgtttt tctgacggat ttgctgggcg
     7621 gcacgccgtt tcgcgtagct tcaacgctgg cgatgcaaaa accgggctgt gaagtgatca
     7681 ccggcaccaa tttgcaactg ctactggaga tggtgctgga gcgcgaaggg ttaagcggtg
     7741 aagaattccg tgtacaggca ctggagtgtg gacatcgtgg gctgaccagt ctggtggacg
     7801 agttaggccg ctgccatgaa gaatgtccgg tcgaggaagg gatatgacac acgttctgcg
     7861 cgccagaagg ctgctgactg aagagggatg gctcgatgac catcagttgc gtattgctga
     7921 cggtgtcatc gcagcaatcg aaccgattcc agtgggcgtg actgaacgcg atgcggaact
     7981 gctctgcccc gcttacatcg acacccatgt acacggtggt gcgggcgttg atgtaatgga
     8041 tgacgcgccg gatgtgctcg acaagctggc aatgcacaag gcacgcgaag gtgtcggcag
     8101 ttggttaccg actaccgtaa ccgcgccgct taataccatt catgcggcgc tgaaacgtat
     8161 tgcgcaacgt tgccaacgcg gcggacctgg tgcgcaagtg ctggggagtt atctcgaagg
     8221 accgtacttc acgccgcaga ataaaggcgc gcatccgccg gagttgtttc gcgagcttga
     8281 aattgccgag ctggatcaat tgattgccgt ttctcagcac accttacgcg tggtagcgct
     8341 ggcaccggaa aaagaggggg cattgcaggc catccgccat cttaaacagc aaaatgtacg
     8401 agtgatgctg gggcatagcg cggcgacctg gcaacaaact cgcgccgcgt ttgatgctgg
     8461 tgccgacggc ctggtgcatt gctataacgg gatgacaggt ttacatcacc gcgaaccggg
     8521 aatggttggc gcgggattaa cggacaagcg cgcctggctg gaactgatag ccgatggtca
     8581 tcatgtgcat ccggcggcga tgtcgctgtg ttgttgctgt gcaaaagaga gaatcgtgct
     8641 gatcaccgac gcgatgcagg cagccgggat gccggatggt cgctatacgt tatgtggcga
     8701 agaagtgcag atgcacggtg gcgttgtccg taccgcgtcc ggtgggctgg cgggcagtac
     8761 gctgtctgtt gatgcggcag tgcgcaacat ggtcgagttg acgggcgtaa cgcctgcgga
     8821 agccattcat atggcatcgc tgcatccggc gcgaatgctg ggtgttgatg gtgttctggg
     8881 atcgcttaaa ccgggcaaac gcgccagcat cgttgcgctg gatagcgggc tgcatgtgca
     8941 acaaatctgg attcagagtc aattagcttc gttttgatag tttgctcctt tattgggcct
     9001 tcacttcccc cgtaaggcct ttctttttct ttcgttttga tctgtgcagc ggtgtcggat
     9061 gcgacgctaa cgcgtcttat gcgacctacg gtacgccgca tccagcaatc ggtgaacata
     9121 gcgacgtcat tacgcaattc tttaatcttc ccttgtcttt tctttcaatg atcacagatt
     9181 tcgttttatt tcctttttct ccattgaact ttcggtttct tttctataga ttttaatcaa
     9241 cgaaagacat caccaagtga aatgaaacga aaggcaagtg aaagcgacaa cgcccgacgt
     9301 caagttcatc agactaagga ttgagttatg ccaaaaaatt acacccctgc tgccgccgca
     9361 accggtacat ggactgaaga agagatccgc catcagcctc gcgcatggat ccgttcactc
     9421 accaacatcg acgcgctacg ttccgcgctc aataacttcc ttgaaccgtt actgcgcaaa
     9481 gagaatctgc ggatcatcct gaccggagcc ggaacgtcgg catttatcgg tgacatcatc
     9541 gcgccgtggc tcgccagcca taccggtaaa aacttcagcg ccgtaccgac caccgatctg
     9601 gtcaccaatc cgatggacta cctgaatcca gctcatccgc tgctgttgat ctccttcggt
     9661 cgatccggca acagcccgga aagcgtcgct gccgtggaac tggcaaatca atttgtaccg
     9721 gaatgctatc acctgccgat cacctgcaac gaagcgggcg ctctttacca aaacgcgatc
     9781 aacagcgata acgcatttgc cctgctgatg cccgcagaaa cgcacgatcg cggctttgcg
     9841 atgaccagca gcattaccac catgatggcc agctgcctcg cggttttcgc acctgagacg
     9901 atcaacagcc aaaccttccg cgacgtggcg gatcgttgcc aggcgatcct gacctcactg
     9961 ggcgatttca gcgaaggtgt gtttggttac gcaccgtgga aacggatcgt ttatctcggc
    10021 agcggtggct tacagggcgc agcacgcgag tcggcgctga aagtgctgga actgacggcg
    10081 ggtaaactgg cggcctttta tgattctcca accggattcc gtcatggacc aaaatcgctg
    10141 gtcgataacg aaacactggt ggtggtattt gtctccagcc acccttacac ccgtcagtat
    10201 gatcttgatc tgctggctga actccgccgt gacaaccagg caatgcgcgt aatcgccatc
    10261 gccgcggaaa gcaccgacat cgtcgctgcc ggtccacata ttatcctgcc gccgtcacgt
    10321 cactttatcg acgttgagca ggcattttgc ttcctgatgt acgcccagac gtttgcactg
    10381 atgcagtcgc tgcacatggg caatacgccg gataccccat cagccagtgg caccgttaac
    10441 cgcgtggtgc aaggcgtaat cattcatccg tggcaggcat aagaggatcg cattatgagc
    10501 attatctcca ctaaatatct gttacaggac gcccaggcca atggctacgc ggtgcctgct
    10561 tttaacattc ataacgccga gacgatccag gcgatcctcg aagtgtgcag tgaaatgcga
    10621 tcgccggtga tcctcgccgg aacgccgggg acctttaaac atatcgcgct ggaagagatc
    10681 tacgccctgt gcagcgccta ttccacaacc tacaacatgc cactggcgct gcatctcgac
    10741 caccacgaat cgctggatga tattcgccgt aaagtccacg caggtgtgcg cagtgcaatg
    10801 atcgacggca gccacttccc gtttgccgag aacgtgaagc tggtgaaatc ggttgttgac
    10861 ttctgccact cacaggattg cagcgtggaa gcagaactgg gccgcctggg cggtgttgaa
    10921 gatgacatga gcgttgacgc cgaaagtgca ttcctgaccg atccacaaga agctaaacgc
    10981 tttgtcgaac tgactggcgt cgacagcctg gcggtagcga ttggtacggc gcacggctta
    11041 tacagcaaaa cgccgaagat tgatttccag cggctggcgg aaattcgtga agtggtggat
    11101 gttcctctgg tgctacatgg tgccagcgat gttccggatg aatttgtccg tcgcactatt
    11161 gaacttggcg tcacaaaagt gaacgttgcc acagaattaa aaatagcctt cgctggcgcg
    11221 gttaaagcct ggtttgcgga aaatccgcag ggtaatgatc ctcgttatta tatgcgcgtc
    11281 ggaatggatg cgatgaaaga agttgtcaga aataaaatta atgtctgtgg ttcagcgaat
    11341 cgaatttcag cataatcatt agttttttat gatttatccc aatgtacttc ccgattaata
    11401 tcggggagtg ccttaatgga aaaggagata actaaacctt aataaataca tcagtacaat
    11461 atcgcaacaa taatatattt aaaaaaatta tattattcaa ctttatggtg aggattacac
    11521 aatgagcagt ccaaatattc tcttaacccg tattgataac cgtctggttc atggccaggt
    11581 tggcgtgacc tggacatcca ccatcggtgc aaatctgctg gtagtcgtgg atgatgttgt
    11641 cgctaacgat gatattcaac agaaattaat gggtattacc gcggaaacct acggctttgg
    11701 cattcgtttc tttactatcg aaaaaaccat taacgtcatc ggcaaagctg caccgcatca
    11761 gaagatcttc ctgatttgcc gtacgccaca aacggtacgt aaattggtag aaggtggcat
    11821 tgacctgaaa gatgtcaacg tcggcaatat gcatttctcg gaagggaaaa agcaaatcag
    11881 cagtaaagtt tatgtcgatg accaggatct cgcggactta cgttttatta aacaacgtgg
    11941 cgtgaatgtt ttcattcagg acgtccctgg cgatcaaaaa gaacaaatcc ctgactaaat
    12001 ctaaaatcgc cttaatattg gtttgaggta ataaaaatgc atgaaataac cctacttcag
    12061 ggattatccc tggcggcgtt agttttcgtt ctggggattg atttttggct ggaagcctta
    12121 tttttattcc gcccgataat cgtttgtacc ctaactggcg ctattctcgg tgatattcag
    12181 actggcttaa ttaccggtgg tctgacagag ttggctttcg ccggattaac ccctgcaggt
    12241 ggtgttcagc cgcccaaccc gattctggcg ggtctgatga ccaccgtcat tgcatggtct
    12301 acgggcgttg atgccaaaac agcaattggt cttggcctgc cgtttagttt gttaatgcag
    12361 tacgtcattc tgttcttcta ttccgctttc tcattattta tgaccaaagc cgataaatgc
    12421 gcgaaagagg cggatacggc agcgttttcc cggcttaact ggacaacgat gctcatcgtc
    12481 gcttcagcgt atgcggtgat tgctttcctc tgtacttacc tggcacaagg ggcgatgcag
    12541 gcgctggtga aagcgatgcc cgcctggttg acccacggct ttgaagtggc tggcggtatt
    12601 ctgcctgccg ttggttttgg cttgctgctg cgcgtaatgt tcaaagcgca atatatccct
    12661 tacctgatcg ccggtttcct gtttgtttgc tacatccagg tcagcaacct gttgccggtt
    12721 gccgtactgg gcgcaggctt tgcggtgtat gagtttttca atgcgaaatc ccggcagcaa
    12781 gcgcaaccgc agcccgttgc cagtaaaaat gaagaagagg actacagcaa tgggatctga
    12841 aatcagtaaa aaagatatca cccgtctggg ctttcgttcg tcgctgctgc aagcgagctt
    12901 taactacgaa aggatgcagg cgggcggttt tacctgggcg atgttgccga tcctgaaaaa
    12961 gatttataag gacgacaaac cgggcttaag cgcggcgatg aaagataacc tcgaatttat
    13021 taatacccac ccgaatctgg tcggattcct gatggggtta ttaatttcga tggaagaaaa
    13081 aggagaaaac cgcgacacca ttaaaggcct caaagtggca ctgtttggcc caatcgccgg
    13141 gattggcgat gcgattttct ggtttacttt gttgccgatt atggcgggaa tttgctcatc
    13201 atttgccagc cagggaaacc tgctggggcc gattctattt ttcgccgttt acctgcttat
    13261 ctttttcctg cgcgtcggct ggacccacgt cggttattca gtcggcgtga aggcgatcga
    13321 taaagtgcga gagaactcgc agatgattgc tcgctcggca accatcctcg ggatcacggt
    13381 aatcggcggg ctgatcgctt cgtatgtgca tattaacgtg gtgacatcgt ttgccatcga
    13441 cagtacccac agcgtcgcgc tgcaacagga tttcttcgat aaagtcttcc cgaacatttt
    13501 accgatggcc tacaccctgc tgatgtatta cttcctgcgg gtgaaaaaag cgcatccggt
    13561 gctgttaatc ggcgtgactt ttgtgctctc tattgtttgt tccgcattcg gcattttgta
    13621 aatggaacga ggcactgctt ctggcggtgc ctctttactt aaggaatttc atcctgtgca
    13681 aacccttcag caagttgaaa actatacggc gttaagtgaa cgagccagcg aatatttatt
    13741 ggctgtgatc cgtagcaaac cggatgccgt gatttgcctg gcgaccggag ccacgccatt
    13801 actgacgtat cattatctgg tagaaaaaat ccaccagcag caggttgata tcagccagct
    13861 caccttcgtg aagctcgacg aatgggtgga tctgccatta acgatgcctg gcacctgcga
    13921 aactttccta caacagcata tcgtgcagcc gctggggctg cgtgaagacc agctcatcag
    13981 ctttcgctcc gaagagataa atgagacaga gtgcgaacgg gtaacgaacc tgattgcgcg
    14041 caaaggcggt ctggatttat gcgttctagg attggggaaa aacggtcatc ttgggctgaa
    14101 cgaaccggga gaaagcctac aaccggcctg ccatatcagt caacttgatg ccagaacaca
    14161 gcaacatgag atgttaaaaa ccacgggtcg ccccgtgact cgtgggatca ccttaggcct
    14221 gaaggatatt ctcaatgccc gtgaggtttt gttattggtg actggcgaag gaaagcagga
    14281 tgcgacagaa cgttttctca cggctaaagt ctccaccgct atcccggctt cgtttttatg
    14341 gctgcacagt aactttattt
//
LOCUS       DAPGWB010000114        14289 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.115, whole genome shotgun sequence.
ACCESSION   DAPGWB010000114 DAPGWB010000000
VERSION     DAPGWB010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14289
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.115"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(112..192)
                     /gene="shoB"
                     /locus_tag="RHX79_003288"
     CDS             complement(112..192)
                     /gene="shoB"
                     /locus_tag="RHX79_003288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin ShoB"
                     /protein_id="HDV2198424.1"
                     /translation="MTDCRYLIKRVIKIIIAVLQLILLFL"
     gene            complement(612..992)
                     /locus_tag="RHX79_003289"
     CDS             complement(612..992)
                     /locus_tag="RHX79_003289"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HDV2198425.1"
                     /translation="MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWAIWKTHH
                     QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKL
                     GVVNMHVTLADERHYACATVIIES"
     gene            complement(992..1723)
                     /gene="pdxJ"
                     /locus_tag="RHX79_003290"
     CDS             complement(992..1723)
                     /gene="pdxJ"
                     /locus_tag="RHX79_003290"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HDV2198426.1"
                     /translation="MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITV
                     HLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVT
                     TEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYA
                     DAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAI
                     IGRAVMTGLKDAVAEMKRLMLEARG"
     gene            complement(1735..2463)
                     /gene="recO"
                     /locus_tag="RHX79_003291"
     CDS             complement(1735..2463)
                     /gene="recO"
                     /locus_tag="RHX79_003291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDV2198427.1"
                     /translation="MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRS
                     TLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEY
                     ETRFSELFFDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDD
                     TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLG
                     GKPLKSRELFRQFMPKRTVKTHYE"
     gene            complement(2475..3380)
                     /gene="era"
                     /locus_tag="RHX79_003292"
     CDS             complement(2475..3380)
                     /gene="era"
                     /locus_tag="RHX79_003292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDV2198428.1"
                     /translation="MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
                     HRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
                     PDDEMVLNKLRDGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGL
                     NVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
                     ERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
                     LWVKVKSGWADDERALRSLGYVDDL"
     gene            complement(3377..4057)
                     /gene="rnc"
                     /locus_tag="RHX79_003293"
     CDS             complement(3377..4057)
                     /gene="rnc"
                     /locus_tag="RHX79_003293"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004248457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDV2198429.1"
                     /translation="MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLG
                     DSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK
                     SGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL
                     QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ
                     ALKKLELE"
     gene            complement(4330..5304)
                     /gene="lepB"
                     /locus_tag="RHX79_003294"
     CDS             complement(4330..5304)
                     /gene="lepB"
                     /locus_tag="RHX79_003294"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDV2198430.1"
                     /translation="MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGD
                     SLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFI
                     LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDP
                     VSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETK
                     ENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNR
                     DNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGVRLSRIGGIH"
     gene            complement(5320..7119)
                     /gene="lepA"
                     /locus_tag="RHX79_003295"
     CDS             complement(5320..7119)
                     /gene="lepA"
                     /locus_tag="RHX79_003295"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDV2198431.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATEAVR
                     CSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLR
                     KGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTL
                     ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPA
                     VNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEV
                     VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRG
                     RELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
                     KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
     gene            complement(7317..7796)
                     /gene="rseC"
                     /locus_tag="RHX79_003296"
     CDS             complement(7317..7796)
                     /gene="rseC"
                     /locus_tag="RHX79_003296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR-reducing system protein RseC"
                     /protein_id="HDV2198432.1"
                     /translation="MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLG
                     PQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFAS
                     DVAALCGAILGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ"
     gene            complement(7793..8749)
                     /gene="rseB"
                     /locus_tag="RHX79_003297"
     CDS             complement(7793..8749)
                     /gene="rseB"
                     /locus_tag="RHX79_003297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor regulatory protein RseB"
                     /protein_id="HDV2198433.1"
                     /translation="MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYE
                     LSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTL
                     NGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
                     DTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKA
                     KFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQM
                     LRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ"
     gene            complement(8749..9399)
                     /gene="rseA"
                     /locus_tag="RHX79_003298"
     CDS             complement(8749..9399)
                     /gene="rseA"
                     /locus_tag="RHX79_003298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-E factor RseA"
                     /protein_id="HDV2198434.1"
                     /translation="MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMR
                     GDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLT
                     QMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANN
                     GQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
     gene            complement(9432..10007)
                     /gene="rpoE"
                     /locus_tag="RHX79_003299"
     CDS             complement(9432..10007)
                     /gene="rpoE"
                     /locus_tag="RHX79_003299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HDV2198435.1"
                     /translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG
                     DVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIE
                     AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
                     AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
     gene            complement(10004..10159)
                     /gene="rseD"
                     /locus_tag="RHX79_003300"
     CDS             complement(10004..10159)
                     /gene="rseD"
                     /locus_tag="RHX79_003300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rpoE leader peptide RseD"
                     /protein_id="HDV2198436.1"
                     /translation="MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFG
                     LGRLYLG"
     gene            10415..12037
                     /gene="nadB"
                     /locus_tag="RHX79_003301"
     CDS             10415..12037
                     /gene="nadB"
                     /locus_tag="RHX79_003301"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HDV2198437.1"
                     /translation="MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG
                     STFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGV
                     LFDTHVQPNGEESYHLTREGGHSHRRILHAADATGREVQSTLVSKAQNHPNIRVLERS
                     NAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPD
                     ISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTR
                     FMPDFDERGELAPRDIVAHAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLG
                     LGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSL
                     LECLVYGWSAAEDITRRMPDAHGVSTLPPWDESRVENPDERVVIQHNWHELRLFMWDY
                     VGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRK
                     ESRGLHFTLDYPELLTHSGPSILSPGNHYINR"
     gene            complement(12022..12759)
                     /gene="trmN"
                     /locus_tag="RHX79_003302"
     CDS             complement(12022..12759)
                     /gene="trmN"
                     /locus_tag="RHX79_003302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417070.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(1)(Val)
                     (adenine(37)-N(6))-methyltransferase TrmN"
                     /protein_id="HDV2198438.1"
                     /translation="MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAG
                     VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHT
                     ADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARYTTTLDHPSLLTCAAECIT
                     EEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS
                     DRLVIRGPDQNYSEAYTALTQAFYLFM"
     gene            12891..14225
                     /gene="srmB"
                     /locus_tag="RHX79_003303"
     CDS             12891..14225
                     /gene="srmB"
                     /locus_tag="RHX79_003303"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HDV2198439.1"
                     /translation="MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDV
                     LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKH
                     THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
                     RMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRE
                     RKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNC
                     YLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH
                     RIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIDELRPKTRAPSEKQTG
                     KPSKKVLAKRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE"
BASE COUNT         3434 a         3822 c         3565 g         3468 t
ORIGIN      
        1 ataatcattc actaagttaa tttatatagt atctgccaag acacttattt atagttatta
       61 aaggcgcgtc cgattggttc accggacgca ccttaagtac gtttccttgt gttataagaa
      121 cagaaggatc agctgtaaaa cagcaatgat gattttgatg acccgtttaa tcaggtatcg
      181 gcaatcagtc attcgttttt ccttaaacaa ggaatgcagc tgttcagatt agcccttaca
      241 tctccccaaa actgaacgtg cgagttattg agggtgcatg ctgcactcca caccagagct
      301 ttgacgacac cactcgtttc aatgggggaa ttctgtggca tggtgtaaag cacagcaaaa
      361 tcttcaataa cgaagccaat tttaatgtac ttacgaattg gcggtcacgt taatctttcc
      421 atcaatattg ctttcttcgt aaaggctcga gtttttatgc taaagattgc aagttgcttg
      481 taaaagataa gtacactgat ccataatcgc tgttgttgag ggtgcatgct gcacaaaatt
      541 aaagttaaaa agtaaaaccc ccgttcctta ccagttcggg ggttttactt tttaaagaga
      601 acggtattat tttaactttc aataattacc gtggcacaag catagtggcg ttcatctgcc
      661 agcgttacat gcatatttac aacgccgagc ttttccgcca gttttaatgc ctcaccccat
      721 agccgtagcc gtggtttgcc gagctcatca ttgaatactt caaattgatt aaacgccaga
      781 ccattgcgga tcccggtgcc aaacgctttt gctgcggctt ctttcacagc aaaacgcttc
      841 gccagaaaac gcaccggctg gtggtgcgtt ttccagattg cccattcgtt atcgcttaat
      901 acgcggcgtg ccaggcgctc accggatcgg gcgatcactg cttctatgcg agcgatctct
      961 acgatatccg tgcctaaacc taatattgcc attagccacg cgcttccagc atcagacgct
     1021 tcatttctgc caccgcatct ttcagtccgg tcatcactgc acgaccaata atggcatgac
     1081 cgatattcag ttcatgcatc tcagggatgg cggcaatagc tttcacgttg tgataggtca
     1141 gaccgtgacc agcgttaact ttcagaccga gactagcggc aaaggtcgcg gctttggcga
     1201 tacgcgccag ctcttgcgcc tgttcggcgt cagttttggc atcagcatag caaccggtgt
     1261 ggatctcgat aaacggtgcg ccaacctctg ccgcagcttt gatctgctct tcatcggcgt
     1321 cgataaagag agaaacctgg atcccggcat ctgccagacg tttgcaggca tcgcgcattt
     1381 tgtcacgctg ccctgcgacg tccaggccgc cttcggttgt tacttcctga cgcttttccg
     1441 gtaccagaca gcaaaaatgt ggcttcgtct caacggcgat cgccagcatc tcttcggtca
     1501 ccgccatctc cagattcatg cgggtatcca gcgtctgacg caggatgcgc acatcacggt
     1561 cagtaatgtg gcggcgatct tcacgtaaat gcacggtaat gccgtccgct cccgcctgct
     1621 cagcaataaa cgccgcctgc accggatccg ggtaagcagt accgcgtgcg ttacgcagcg
     1681 ttgcaatatg gtcaatgttg acgcctaaca gtaattcagc catgacaatc ctcatcattc
     1741 ataatgtgtt ttcaccgttc gcttaggcat aaactgccgg aacagttccc tgctctttaa
     1801 tggtttaccg ccaagatacg gcttaagcgc catgcgggta aagcgtttcg cggcgcgtag
     1861 tgtgtctgcg tcaggaaatt cccgcgcgtt taacgctttt aactgccttc cggtgaacgt
     1921 tttattgtcg ataacgacgc ttgcgataaa ccctttttct tcgcgataac gatacgtcat
     1981 ggtgtcatct accggctcgc cgctacccgc acaatgggta aaattgacgc catagcccag
     2041 atgcccgagc agtgccagtt caaagcggcg cagcgcgggt tctggcgtac cagtggcacc
     2101 tgcaagagac tgaatgcagt gcaagtaatc gaaaaagagt tcagagaagc gcgtctcgta
     2161 ttccagtacg cgggagagaa gttcgttgat gtacagaccg ctgtaaagcg tgataccgct
     2221 taatggcagc gccagcgaga cagcttcagc actgcgcagc gttttgactt cgccacgccc
     2281 gccgaaacgt agcaagagag gggtgaaagg ctgtaatgca cctttcagag tagagcgttt
     2341 agagcgtgcg cctttggcaa ccagacgcac gcgacccgat tcctccgtga agacgtccag
     2401 catcaggctg gtttcgctcc acgggcgact atgcaggaca aatgcgcgct gccagccttc
     2461 catcggagtg actcttaaag atcgtcaacg taaccgagac tgcgcagtgc gcgttcgtcg
     2521 tcggcccaac cggatttcac ttttacccac agttcaaggt ggacaggcgc ttcgaacatt
     2581 tcctgcatgt ctttacgcgc ttcaatcccg atggttttga tcttggcccc tttgttgcca
     2641 ataaccatct tcttctgccc ttcacgctca acgagaatca aaccattgat gtcataacca
     2701 ccgcgttcgt tagagacgaa acgttcgatc tccacggtca cggagtacgg cagttcggcg
     2761 ccgaggaaac gcatcagttt ttcgcggatg atttcagacg ccataaaacg ctgtgagcga
     2821 tcggtgatgt aatcttccgg gaagtgatgg gtcgcttcag ggagatgctt acgcacgatt
     2881 gctgcgatag tgtcgacatt cagcccggtt tcagcagaga tcggcacgat atcgaggaag
     2941 ttcatctgac ttgccaggaa ctgtaagtgc ggcagcagat cggctttttc ctgcacgtta
     3001 tccactttgt tcaccgcgag gatcaccggc gctttgccat cgcgcagttt gttgagcacc
     3061 atttcgtcgt ccggcgtcca gcgggtgcct tcaacgacaa aaatcaccag ctcaacgtcg
     3121 ccaatagagc tgctcgccgc tttgttcatc aggcggttaa tagcgcgttt ttcttccata
     3181 tgcaggccag gggtatcaac gtagatcgcc tgatacgcgc cttcagtatg gatccccaca
     3241 atgcggtgac gagttgtttg cgctttgcgg gaggtgatgg agatcttctg ccccagcagt
     3301 ttgttcaaca atgtggattt gccaacgttc ggacgtccga cgatggcaat aaatccgcag
     3361 taacttttat cgatgctcat tccagctcca gttttttcaa cgcctgttcg gcggcagcct
     3421 gctcagcctt acgacggctt gaacctgtgc caaccaccgg ttcactcagg ccgctgacct
     3481 ggcagtggat agtaaattcc tgatcgtgcg cttcgccacg tacctggact accagataag
     3541 tcggcagcgg cagatggcga ccctgcaaat attcttgcaa gcgcgttttc ggatcttttt
     3601 gtttatcgcc tgggctaatt tcgtccaaac gagtttgata ccagttgagg attaatttct
     3661 cgacggtttg aatatcactg tcgaggaata cgccaccaat taatgcttcg acggtgtcgg
     3721 cgagaattga ctcacgacga aatccaccgc ttttaagttc acctggccct aaacgtaagc
     3781 actcgcctaa ctcaaattcg cgcgccagtt ccgccagcgt attgccacgg accagcgtgg
     3841 cgcgcatccg gctcatatcg ccttcatcca cacgagggaa acggtgataa agcgcattgg
     3901 cgataacgta gctcagaata gagtcgccta aaaattctaa acgctcgtta tgtttgctgc
     3961 tggcactacg atgagttaat gcctgctgca acagttcctg atgattaaaa gtgtagccca
     4021 gcttccgttg aagccgatta attacgatgg ggttcatgcg ataccaataa ataaatgcgt
     4081 caacaattca gcacacgaaa cagacctgat atacatggct ctgctaactg cttcgctgca
     4141 gtttcagttt accggtatat ggggaccaac gctgtttcgt gtgccgtggc aacctggagg
     4201 tgccaacctt aaacttcggg ggaatattct atacacaacg acgggggatg tcgttagcca
     4261 cgggagattt atctcataaa taattcacgt tgtcgccata acggcgacaa cgtgaacgaa
     4321 gatgggctat taatggatgc cgccaatgcg acttaagcgc acacctgtcg gccattcgcc
     4381 ttcttgctta tcgaaactca tccagatagc cgttgcccga ccgaccagat tcgcttcagg
     4441 cacaaaaccc cagtaacggc tgtccgcgct gttgtcgcgg ttgtcgccca tcatgaagta
     4501 ttgtcccggc ggaacaatcc aggttgccag ttgttgccct ggctgctggt aatacatccc
     4561 cacctggtcc tgcgcaatcg gcactgtcag aattcggtgc gtcacatcac ccagtgtctc
     4621 tttacgctcg gaaagacgaa ttccattttc tttggtttcg tttttcggca cttcaaagaa
     4681 tccgctggtc gcttccccac cattacggcg tgagaaggtc tgaacgaaat cgctcggttc
     4741 cacgttggag taggtgaccg gtagcgcgtt ttcacacgcc tggccggaac tgcatcccgg
     4801 ttgaatcgtc agctcttttg agaccggatc gtaagtgact ttatcgcccg gtaaacccac
     4861 cgcgcgcttg atgtaatcaa gctttggatc ttccggatat ttaaagacca cgatatcgcc
     4921 gcgtttcgga tgaccggttt cgatcagcgt tttctggtag ataggatctt taatgccata
     4981 agcaaacttc tctaccagaa taaaatcacc gattaacaga gtcggcatca tcgaacctga
     5041 cgggatctgg aacggttcat aaataaacga acgtacaatc aatacgatag ccagcaccgg
     5101 aaaaacagaa gcaccggttt ccagccagcc aggcttcggc gcaacctttt tcagggttgc
     5161 tttatccagt gagtcaccgg cagccgcctg cgccgctgcc tgacgttccc gccgtttagg
     5221 tgcgaaaaag aatttatcca cgcaccataa aatgcccgtc accagtgtgg caatcaccag
     5281 aatcagggca aacatattcg ccatgccaac tcctaagggt tatttgttgt ctttgccgac
     5341 gtgcagaatg gcgaggaacg cttcctgcgg cagctcgacg ttaccgatct gcttcatgcg
     5401 tttcttacct tctttctgct tctgcagcag ctttttctta cggctgatat cgccgccata
     5461 acatttagcc agtacgtttt tacgcagctg tttcacggtg gatcgcgcaa taatgtgcgt
     5521 accaatcgct gcctgaatgg cgatatcaaa ctgctggcgt gggatcagat ctttcatctt
     5581 ctccaccaac tcgcgaccgc ggttttgcga attatcacgg tgggtgatca gcgccaacgc
     5641 atcaacacgt tcaccgttga ttaatacgtc tacacgtacc atgtcggacg cctggaagcg
     5701 tttgaagttg taatccagag acgcataacc acgcgaggta gatttcaggc gatcgaagaa
     5761 gtcgagcacc acttccgcca tcgggatctc gtacgtcagc gccacctgat taccgtggta
     5821 aaccatattg gtctgcacgc cgcgtttttc tacgcacagc gtaataacgt tgccgagata
     5881 tgcctgcggc agcagcatgt gacattcggc aatcggctcg cgcagttcgt agatgttatt
     5941 taccgctggc agcttggatg gactgtcgac gtaaataact tctcttgacg tggtttcaac
     6001 ttcatacact acggtcggcg cagtggtgat cagatccaga tcgtattcac gttccagacg
     6061 ttcctggatg atctccatgt gcagcaggcc gaggaagccg cagcggaaac caaagcccag
     6121 cgcgctggag ctttccggct catagaacag tgaagcatcg ttcaggctga gtttacccag
     6181 cgcgtcacgg aaggcttcat agtcgtcgga acttaccggg aacagaccgg cgtatacctg
     6241 cggtttgact ttcttaaagc caggcagcgc cttttctgcc ggattacgcg ccagcgttaa
     6301 ggtatcgccg actggagcgc cgtggatatc tttaatcgca cataccagcc agcctacttc
     6361 gccacatttc agttcagtgc ggtcaacctg cttcggcgtg aagatgccca gacggtcggc
     6421 gttataggtc tgcccggtac tcatgacttt cactttgtcg cccttacgca gggtgccgtt
     6481 tttaatacgg ataagtgaaa caacgcccag atagttgtcg aaccaggagt cgataattag
     6541 tgcctgcaac gggccttccg gatcgccttc cggcggcgga atgtcgcgca ccagacgttc
     6601 gagaacgtcc tgcacgccaa cgccggtttt cgctgaacag cgcaccgctt cggtggcgtc
     6661 gatgccgacg atatcttcaa tttcttccgc cacgcgttca ggatcggctg ccggcaggtc
     6721 aatcttgttc agtaccggca ccacttcgag atccatttcc atggcggtgt agcagtttgc
     6781 cagggtttgc gcttctacgc cctgcccggc gtcgaccacc agcaatgcac cttcacaggc
     6841 agccagcgaa cgggaaactt cataggagaa gtctacgtgg cccggggtgt cgataaagtt
     6901 aagctgatag gtttcgccgt cagacgcttt gtagtccagc gtcacgcttt gcgctttgat
     6961 ggtaatgcca cgctcacgct caagatccat ggaatcgaga acctgcgcct ccatttcacg
     7021 gtcagacagg ccaccgcaga tctggataat acggtcagac agcgtcgatt taccgtggtc
     7081 aatgtgagct atgatcgaaa agttacgtat attcttcata aagtatgatt attgtgcctt
     7141 aatgcccggt taaccaggct tttagaagtc gctgttctga gcttaacgtc tgtattaata
     7201 gaaacgccgc attctacact acaacattga ggcgaggaaa tgttcatacc gtatggattg
     7261 tggtatctgg aaacgtcctc gcatttgtta tgcaaaatgc aataaagcca gtgaaatcac
     7321 tggctcgcgt cttccgaaga tgtttcaaat cgcacaaggc caggcggcaa tgccacgctt
     7381 aagatgatcg gttgccattc tgcccgggca gcaaacttac gcgagtagcc gcgcgcaatc
     7441 aggaacccgc caataccacc gaggatcgca ccacataatg ctgcgacgtc agaagcaaag
     7501 agtagctgaa atagcgaagc gatgaggaat aatcccacca gcggcgacat ataaaccagt
     7561 aatgcggagc taagcaggct gccttcggcg atccccaatt ccactttttg ccccggcact
     7621 aacggctcat cacagggtac gacaatggta tgcgtggttt gcgggccaag tttatttaac
     7681 acgcggctac cgcaaccggc gcgtgaagcg cagctgctgc atgaagcttt aacatcacaa
     7741 ctgaccagcg cctgcccgtt ttgccaggag acgacggtag cccactcttt gatcattgcg
     7801 ctgccccgaa cttaatattc tcggcaatgc gtttcgccgt ttgcggcggc agttcaccga
     7861 caatggtgat ttcggcgtta tcacgtacgc ttgtactgac ggttctgcgt ccggtgcgca
     7921 acatctgatc ggtgctcgat ggcgtagcgc ggttaacgtt taccgagaag ctgaataatc
     7981 cgtcggaata gagacgtgat tcgataggca tgttgtccat cgtcggtagc ggacgtcgac
     8041 tactggaaac ttcgctaaaa ccctgtggca accaggttgg cgtccagctg aatttagctt
     8101 tttcacctac aggaacagaa agcaacggcg gcaaatttgc cttcgccagc gtctgcatac
     8161 tgctgctgat atcctgattg acgttaaaag caatcacgcg aaattgttcc agcgtttcac
     8221 catcgcgatc aaggagatca acccgcatcg gtaatttcga ttcggtgtcc atccacacga
     8281 tgtagctgta gcgtgtacca tctcgggcaa ccacgcgaat gacttcgcaa agacgatcag
     8341 caatacgcgt gcgcccgacg gagataaagt cgtagtaagg agaaaggcgt ttgaaatcgg
     8401 tatagataag cgatggcaga gaatcaacaa tgtaatcgcc attaagcgtg aacggttcaa
     8461 gtcccggttc aaaatagctg atttcattgc cgcgctgtac cacttcccgg cgcgggccat
     8521 ccatttgcaa caattgtgca agagggcggt tatcgaggcg tgcatgtcga taacgcagag
     8581 actcaacacc ctgtttattg atgctgatga atgacagctc gtaattcagt gactgactgg
     8641 ccaggttcat ctgctgtaat aacgccccgg acgcgggagt ggccgaggcg ttagcagaga
     8701 ataacaggct acctgtcact aatgacatgg caaaccaaag ttgcttcatt actgcgattg
     8761 cgttcctaaa gtttgaattc ctggcacctg tacagcggct tgctgggttt gcgcctgctc
     8821 aaactgaagc tgttcagagt ggagtcggcg ttgcagttcg taatcctgca acattgcatt
     8881 aatgcgacga cgctgctcct gtacctgctg ctgttgacca ttgtttgcgg tcgcttcaga
     8941 aggtactccc aggcttaccg ggctggcttt acccatcatc ggcagtgtat taaataccgg
     9001 cgtttcgggc tgctgggacg tttcagattg tccattatag tgctggacgc caacgataac
     9061 tgcaagcgat acgcatgctg ctacgcccat ttgggtaagc tgtgccgccc acggacgtac
     9121 tttctgccag aatggcattt tctgccattg atgcggcgca ggctgggctt ccgggatcaa
     9181 tgtcgccggt tgacgtactg gctcttcttc aatggcggcc atcacgcgtg aagagatatc
     9241 gaaatggagc acctcgggag tatcaccccg cattgagtca cggattaagt gatagctttc
     9301 ccaggttttc tgcatttctg ggttatgagc cagttcgtta agcagctcac tatccagcgt
     9361 ttcgccatcc attaaagcgg aaagttgttc tttctgcatg cctaataccc ttatccagta
     9421 tcccgctatc gtcaacgcct gataagcggt tgaactttgt tatcaatagc ttccctcgct
     9481 cggaagatac gtgaacgcac cgtacctacc ggacaatcca tgatagcggc tatctcttca
     9541 tagctcaggc catccagctc ccgcaaggtt attgccatgc gcaaatcttc cgggagggac
     9601 tcaatagttc ggaaaactat ctgtctcagt tcttctgaca acattaagtt ctcagggttc
     9661 gaaatttctt tcaacgcgcc gccactttcg aagttttcag cttcaatggc atccacatca
     9721 ctggaaggtg gacgacgccc ctgagcaacc aggtaatttt tcgctgtatt tacagcaatc
     9781 cgatacagcc atgtataaaa agcgctatct ccccggaacg aatccagcgc acgataggct
     9841 ttaataaaag cttcttgtac cacatcggga acatcacccg acggcacata gcgggaaacc
     9901 agactcgcca ctttatgctg atagcgcact accagtaggt taaaggcttt ctgatctccc
     9961 ttctggaccc gttcaaccag gacctggtcc gttaactgct cgctcatccg aggtaaagtc
    10021 tccccaaacc aaatttccac gcgctatcga aacgccactc cattagctgc aatttgagca
    10081 agcaaagggt tagagtgtct cgtttttgta aagttccgta acgcatctgt ttttgtttgt
    10141 catgctgtag acggatcatt atctatcatt ataagtctac agaatctgaa catcgcatta
    10201 tctgtgtaga aatgcccatt taactgcctg aagagtaacc caacggcctt tttatttcac
    10261 cacctaatcc tccaccagcc agtaacttct ctttttctcg ccgccctgcg tcagcgtgtt
    10321 tagccactgt aacaaatatt aaaatagcag gtgtttattc gcacaacatg atgctatgct
    10381 gaccaaacgg tgtttagtaa attaaacaaa gaaaatgaat actctcccag aacattcatg
    10441 tgacgtgttg attatcggta gcggcgcagc cggactttca ctggcgctac gcctggctga
    10501 ccagcatcag gtcatcgttc taagtaaagg cccggtaacg gaaggttcaa cattttatgc
    10561 ccagggcggt attgccgccg tgtttgatga aactgacagc attgactcgc atgtggaaga
    10621 cacattgatt gccggggctg gtatttgcga tcgccatgca gttgaatttg tcgccagcaa
    10681 tgcacgatcc tgtgtgcaat ggttaattga ccaaggggtt ttgtttgata cccacgttca
    10741 accgaatggc gaagaaagct accatctgac ccgtgaaggt ggacatagtc accgtcgtat
    10801 tcttcatgcc gccgacgcca ccggtagaga agtacaatcc acgctggtga gcaaggcgca
    10861 gaaccatccg aatattcgtg tgctggagcg cagcaacgca gttgatctga ttgtttctga
    10921 caaaattggc ctcccgggca cgcgacgggt tgttggcgcg tgggtatgga accgaaataa
    10981 agaaacggtg gaaacctgcc acgcaaaagc agtggtactg gcaaccggcg gtgcgtcgaa
    11041 ggtttatcag tacaccacca atccggatat ttcttctggc gatggcattg ctatggcgtg
    11101 gcgcgcaggc tgtcgggttg ccaatctcga atttaatcag ttccacccta ccgcactgta
    11161 tcacccacag gcacgcaatt tcctgttaac ggaagcactg cgcggcgaag gcgcttatct
    11221 caagcgcccg gatggcacgc gttttatgcc cgattttgat gagcgcggcg aactggcccc
    11281 gcgcgatatt gtcgcccacg ccattgacca tgaaatgaaa cgcctcggcg cagattgtat
    11341 gttcctcgac atcagccata agcccgccga ttttattcgc cagcatttcc cgatgattta
    11401 tgaaaaattg ctcgggctgg ggattgatct cacacaagaa ccggtaccga ttgtgcctgc
    11461 tgcacattat acctgcggtg gtgtaatggt tgatgatcat gggcgtacgg acgtcgaggg
    11521 cttgtatgcc attggcgagg tgagttatac cggcttacac ggcgctaacc gcatggcctc
    11581 gaattcattg ctggagtgtc tggtctatgg ctggtcggcg gcagaagata tcaccagacg
    11641 tatgcctgat gcccacggcg tcagtacgtt accgccgtgg gatgaaagcc gcgttgagaa
    11701 ccctgacgaa cgggtagtaa ttcagcataa ctggcacgag ctacggctgt ttatgtggga
    11761 ttacgttggc attgtgcgca caacgaagcg cctggaacgt gccctgcggc ggataaccat
    11821 gctccaacaa gaaatagacg aatattacgc ccatttccgc gtctcaaata atttgctgga
    11881 gctgcgtaat ctggtacagg ttgccgagtt gattgttcgc tgcgcgatga tgcgcaaaga
    11941 aagccggggg ctgcatttta cgctggatta cccggaactg ctcacgcatt ccggtccatc
    12001 gatcctttcc cccggcaatc attacataaa cagataaaaa gcctgggtca gcgccgtata
    12061 cgcttcggaa tagttctggt ctggcccacg aatgactaag cgatcgctaa agcattctcc
    12121 cgcctgcggg gagaatgcca gcagcacccg atgcggcagt cgcgcttcgt tttccgccac
    12181 atccgtccgc aaacgtaaat gccagcccat gcttaatgcc agttcagtaa aaccattacc
    12241 aatctgctct ggcagcacca cgcagaaaaa tccctcttcg gtaatgcact ccgccgcaca
    12301 ggtcagcagc gatgggtgat caagcgtagt ggtatagcga gcctgttccc gttgaggtgt
    12361 cgcgcactct actccctgct gatagtaagg tgggttactg atgattaaat cgaagcgtac
    12421 tgtctgctgt gtgatccact gctgaatatc cgccgtatgg acgttaatcc gctctgccca
    12481 cggggactgg ttgatatttt cctgcgcctg cgcggcagct tcactttcca gctcaacggc
    12541 atcaattatc acgctgtcac tggttcgctg cgccagcatc agtgccagca acccgctacc
    12601 cgcgccgata tcaaggcaac gtttcacccc agccaccggt gcccatgcgc ccagcaaaat
    12661 gccatccgtt cccactttca tcgcacagcg atcgtgagca acaaaaaact gtttaaaagt
    12721 aaatccatta cgacgaagca cggatgtaga ctgtgacatg aaaataaaac cttgcaggaa
    12781 aaacggcgat agcaccgggt gagaacaata cccgagaagc gatatccata caaacagatg
    12841 aagattgcag ccgtaacgtc tataatcagc gccccacaca gaggtagaac atgactgtaa
    12901 cgactttttc cgaacttgaa ctcgacgaaa gcctgctgga agccctccag gataaaggtt
    12961 tcactcgccc gaccgccatt caggctgccg ccattccgcc tgcgctcgat ggccgtgatg
    13021 tactcggttc tgcgccgaca ggcaccggta aaacggcggc gtatctgctg ccagcgttgc
    13081 agcacctgct cgatttcccg cgtaagaaat ccggtccgcc gcgtattttg atcctcaccc
    13141 caactcgcga gctggcgatg caggtggccg atcatgcccg cgaactggcg aaacatacgc
    13201 atctggatat cgccaccatc accggcggcg tagcctatat gaaccacgcg gaagtgttca
    13261 gcgaaaatca ggacatcgtg gtcgccacga ccggacgtct gctgcaatac ataaaagaag
    13321 agaacttcga ttgccgcgcg gttgaaacgc tgatcctcga cgaagcagac cgtatgctgg
    13381 atatgggctt cgctcaggat atcgaacata ttgctggcga aacgcgctgg cgtaaacaga
    13441 ccctgctctt ttcggcaacg ctggaaggcg atgcgattca ggactttgcc gagcgtctgc
    13501 tggaagatcc ggtggaggtt tctgccaatc cgtccacccg tgagcgcaaa aaaattcatc
    13561 agtggtatta ccgcgccgat gacctggaac ataaaaccgc attgctggtg catctgttaa
    13621 aacagccgga agcgacccgc tcaattgtgt ttgtgcgtaa gcgtgaacgt gtgcatgagc
    13681 tggcaaactg gctgcgcgaa gcgggcatca acaactgcta tctcgaaggt gagatggtac
    13741 aaggcaagcg taacgaagcg atcaagcgtt tgaccgaagg tcgcgtaaac gtactggttg
    13801 caaccgatgt tgccgcgcgc ggtatcgaca ttcctgacgt cagccacgtc tttaacttcg
    13861 atatgccgcg cagtggcgat acttatttgc accgtatcgg acgtaccgcg cgcgccggtc
    13921 gtaaaggcac cgcaatttcg ctggtggaag cccatgacca tttgctgctg ggcaaggttg
    13981 gccgttacat tgaagagccg attaaagctc gcgttattga tgagttacgc ccgaaaacgc
    14041 gtgcgccaag cgagaagcag accggcaagc catcgaagaa agtactggca aaacgcgccg
    14101 agaagaaaaa agctaaagag aaagagaaac cgcgtgtgaa aaaacgccat cgcgacacca
    14161 aaaatattgg taagcgccgt aaaccaagcg gaacgggcgt gccaccgcaa acgacagaag
    14221 agtaatctca atgccgggtt taagcctggt attaaaagtg ctggcaaacg caaaactgcc
    14281 tgatgcgct
//
LOCUS       DAPGWB010000115        14174 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.116, whole genome shotgun sequence.
ACCESSION   DAPGWB010000115 DAPGWB010000000
VERSION     DAPGWB010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 14174)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14174)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14174
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.116"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            195..803
                     /locus_tag="RHX79_003304"
     CDS             195..803
                     /locus_tag="RHX79_003304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198440.1"
                     /translation="MKTIKRFIVWVNYGLEGWSIFGSSDDWDEAVSIRSEAIDECNID
                     EEDIILAENKNELVVKPAAKQMTEWHRELEAVLMTLDDCQMECDGMTWAVSHLLNEAG
                     VPHDCMYGFVRNEQTKDIVTPHFWVVLDDGWLVDLRLRMWLGDHDNIPHGVFHPDNEP
                     GLFYKGDPVQNHKGMRLGKAVLDIMTDGKLSHVKVPERQDGE"
     gene            808..1329
                     /locus_tag="RHX79_003305"
     CDS             808..1329
                     /locus_tag="RHX79_003305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198441.1"
                     /translation="MEFDYDKSVSNAHLEAAGWGMDAFNHSNPFESHVIYVRDYRNDH
                     IRLFTIKQADFDTIKLPLHLTSDMLASVIAEFVSKAAKGKLNTKESDTLAPALVGYAK
                     STETYRSWRRVSGATERLHMVINIYAGSELLRPFIARAPETVLTTQELLVFSSQVKSM
                     DVSNHPEWFRGRR"
     gene            1332..1853
                     /locus_tag="RHX79_003306"
     CDS             1332..1853
                     /locus_tag="RHX79_003306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198442.1"
                     /translation="MKPVLWIFVLIIAPFVIAKVDQWRKRGIGDTWAWWKSENMPYEL
                     RSATLFLSEQDISTTQPVPMHGRVDQVYQTKNGVLIPLDTKLRQVNHIYESDIIQLSV
                     YRVILSHKYKAPVAKYGYVRTVVETADGDRVRYIKTNLLSEKEVVKLWHRYQSIRSGQ
                     VKTSCSCGGKFHM"
     gene            1950..2423
                     /locus_tag="RHX79_003307"
     CDS             1950..2423
                     /locus_tag="RHX79_003307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198443.1"
                     /translation="MAQLKHNRFVMLGSLVATVVAAANGLSFLTLMAGGMTLLQFMAW
                     KQQDAVRSRFKAAKDAFEALNVIAFDKHWVGSTATVAKVSNMITPPERLDKPWAVQVL
                     AVTKGGTWFAVDLQVTGTDKVQMLSLHQLSEKAAKTMLAFDLEVYEKFFGKPDVA"
     gene            2434..2727
                     /locus_tag="RHX79_003308"
     CDS             2434..2727
                     /locus_tag="RHX79_003308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198444.1"
                     /translation="MEKVKSVDAVEFTAADKKAMTHAAYAQCFFILAQVMAFPSLGVA
                     GAMVAALCGMMPWLTKFAKEAPSKAFGMVMASLCLAPVYGKLCELVVHAIQGA"
     gene            2732..3586
                     /locus_tag="RHX79_003309"
     CDS             2732..3586
                     /locus_tag="RHX79_003309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198445.1"
                     /translation="MGVVRVPYLLAELKERGCADESALAQVMQPGCRIGEEDLRKLAA
                     NLGLEVSELAPAPENAANTRFKAKLRGGLASFLFEYDGCFRHAEGSSHAEMLGIEQED
                     DIGLPSRAADAMLLEKTLYQVIARAKYMLGKIDSKFVRSEQAIEFREQLAPGIFKPGY
                     RGFRFKEAAAGDLPTVMIDGRKFNCVASIARAHGLDPVTVRRRIADTGKAADKLSNDE
                     WKLILAKKKGKGKPFTYLDRTYSNIAQFCREHQLNTNLVYQKVKDRADSADEEFWGLI
                     IETCKRKN"
     gene            3586..4545
                     /locus_tag="RHX79_003310"
     CDS             3586..4545
                     /locus_tag="RHX79_003310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HDV2198446.1"
                     /translation="MAENKEIPWEKELIEKYMFTLHKEQVKDRRWRTMLRVLRASGFV
                     LLMIGFIILASNPGGMPWQSAKAGAPHTAYINIRGEIAAGTLADADHLIPSIQAAFDN
                     PNSQAIVLRINSPGGSPVQAGRIYDEVKAQRALHPEKKVYAIIDDIGASGGYYIASAA
                     DEIYADRASLVGSIGVISSGFGFTGLMDKLGIERRAITSGEHKALLDPFSPLTSDMKK
                     FWEGVLSKTHQQFIERVKAGRGDRLKDDPEVFSGLLWNGEQAKDIGLIDGLGSLNSVA
                     RDVIHQSNLVDYTPTEDIIRRLTQRAKLEASSFVQELSAVKVY"
     gene            4561..5421
                     /locus_tag="RHX79_003311"
     CDS             4561..5421
                     /locus_tag="RHX79_003311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDV2198447.1"
                     /translation="MTEQSTKSLRLGVVAAILLGLVGTGFGIYQFVKEKDLAQEIANV
                     KSTVNQVKDAEGVTFKSKAEFEAAVAESINKFVAQKQQADIDQKYAQFEAAPEKVEEG
                     KHIYGDLGARFTLVEFSDMECPFCKRFHDTPKQIVDASKGNVNWQWKHMPLDFHNPAA
                     HKEALAAECIAEQKGNRGFWVFVNDIFHHTQGNGGGVADLASVVTGVGADLDAFRECL
                     GSGKYEDKVEADIQKAKSYGVNGTPATFVVDNHTGKSQLLGGAQPAQAIMAVMRKMMI
                     ESQQDDSANQ"
     gene            5455..5883
                     /locus_tag="RHX79_003312"
     CDS             5455..5883
                     /locus_tag="RHX79_003312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198448.1"
                     /translation="MIKITTKLGCLLAGLLVLSACSSVPQPNNEYAKALDDTKQVCAA
                     CALVGNDLLVALNKSCDTPMTPETLTSVMNSNPMFAAMMAINSIGGTDFYQVYRDAAI
                     DTLRCNEMDSWPDRTKVRFQQPDMQKALALRVSARQQKAN"
     gene            5940..6299
                     /locus_tag="RHX79_003313"
     CDS             5940..6299
                     /locus_tag="RHX79_003313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198449.1"
                     /translation="MELQEAKEALDSLHPHKASAPLRLVIHQPGGIGGTPTVGVKAIH
                     AGFDWDSNTILIYPEEQLTRLTPDEVAAITKSVSKGQSWHSYQQFKKYREQLAEATEE
                     INRLRAELGRYQNNGRG"
     gene            6299..6745
                     /locus_tag="RHX79_003314"
     CDS             6299..6745
                     /locus_tag="RHX79_003314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe3+-siderophore ABC transporter permease"
                     /protein_id="HDV2198450.1"
                     /translation="MLKRGIINLAASYIIVDALLRNAAIWIFGLSFSVGGTYVTGEAS
                     TWVVYLATSGAMTLCSVVTAYLLVTYHRWGLMTARVWLLLSACLNGYAVYLSSHNIQL
                     VVALLSSLFIALWMLKTLEQPAVKGTYKVIADLHRQLWGMLKGQTQ"
     gene            6742..7260
                     /locus_tag="RHX79_003315"
     CDS             6742..7260
                     /locus_tag="RHX79_003315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase"
                     /protein_id="HDV2198451.1"
                     /translation="MTTNTQNANANQVRSLRDMLVPALLFYVVMTAMFVGLDAFMDKP
                     TSMNLPFMPFLVSMVSFTSDARRAWDWRNGTKVVAVLTAVAMLLAFIYQLAVGEMNLL
                     GVGIYPATAILLLAISWVIRAIGKTAPFQFLGRHLARFGASKWVQRTAAVIVLAGGLA
                     ITIYAYWLNHGS"
     gene            7260..7490
                     /locus_tag="RHX79_003316"
     CDS             7260..7490
                     /locus_tag="RHX79_003316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198452.1"
                     /translation="MMIIATKNGFLVAAELIREEAGYWLLQPRDQKTPVRVNKQDNNK
                     RAFTHMGDALRWAGDPELAKQFDAEGEEHANS"
     gene            7477..8334
                     /locus_tag="RHX79_003317"
     CDS             7477..8334
                     /locus_tag="RHX79_003317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198453.1"
                     /translation="MQIRDYMTKLFDAFGDVEEVTREMLLEQAELIHTISDKCQSTGL
                     FLDSQVRFNQFVQEIEADDKVEDRLLHAWCWVMDRIVKAPTSFHMDGAVILTMPLVAR
                     YLPPVEQEPETIVVNLDEDYKAPVGNQTLCELVMERRHWPQGATCATQEADGGVLYWD
                     APVDVVEEGRKVAGKHGMMAEIGLKHQVDAWYADMDETRLATDWNTAVITPHCLLLSY
                     LDVLQKNKVPFDEGVQLAAEWVKQLGGEFREDTEEAPEAEASVLSLGRATAHCFKPYP
                     DTKNFYYEA"
     gene            8565..9092
                     /locus_tag="RHX79_003318"
     CDS             8565..9092
                     /locus_tag="RHX79_003318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDV2198454.1"
                     /translation="MRLGFVKNTGVSAFLVAMLVVAPQVWAETFTAKVVGVSDGDTVK
                     VLTEQSCDSGKDCRSGKIQYRVRLAEIDTPEKKQPYGSKAKQALSDLVFGRMIKVEQI
                     DKDRYGRLVANLYVDGKWVNAEMVRSGSAWVYRQYAKTPELFKLEAEAKADKRGLWAL
                     PESERTPPWEWRRKH"
     gene            9150..9422
                     /locus_tag="RHX79_003319"
     CDS             9150..9422
                     /locus_tag="RHX79_003319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDV2198455.1"
                     /translation="MNKSELIMKVAEDADISKAKAEAAVNALINSVTEELKAGGTVAL
                     TGFGTFHVKERAARTGRNPQTGENIQIAAANIPGFKAGKGLKDSVN"
     gene            9510..9803
                     /locus_tag="RHX79_003320"
     CDS             9510..9803
                     /locus_tag="RHX79_003320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein ParM"
                     /protein_id="HDV2198456.1"
                     /translation="MRLSSTQKDVLFILYAIEAGGKAEPVPGVKILEMINSARQSGIH
                     GTNFRTSCHTLVENGLLNKYRNASLKLAFRLTDDGRERAGEIYRKRLEEEQEK"
     gene            complement(9830..10132)
                     /locus_tag="RHX79_003321"
     CDS             complement(9830..10132)
                     /locus_tag="RHX79_003321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDV2198457.1"
                     /translation="MARTLDQMLATEKPEVVAKAQKAATEMLLNIHLAELRDRMNLTQ
                     GEIAASLGVRQPTVSEMEKPGRDLKLSSIKRYVEASGGKLRLDVELPDGTHYGFAV"
     gene            complement(10137..10487)
                     /locus_tag="RHX79_003322"
     CDS             complement(10137..10487)
                     /locus_tag="RHX79_003322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDV2198458.1"
                     /translation="MWVIETTDTFDEWFDALDDTDRANVLASMMVLRDRGPMLSRPYA
                     DTVNGSSYSNMKELRVQSKGDPIRAFFAFDPKRKGILLCAGNKTGDEKRFYEVMIPIA
                     DREFAAHLDKLKKE"
     gene            10650..11198
                     /locus_tag="RHX79_003323"
     CDS             10650..11198
                     /locus_tag="RHX79_003323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV2198459.1"
                     /translation="MNNLPLLLDAREAIDYYHQHPGMTDAEKAYVVAFLSGEGRSNSQ
                     IREDLGIEKVYTVTHLKRAGTLSEEELTLWLRNPRKITLGHVRAVAKLPFSKREKLLR
                     DLLHTRTPVHKFEAIAKGKEVDRDADIKRLETLMSDATGRPIKVRYNPAKRSGELTLG
                     FFTLDDLDDVCKALGFDPSEQM"
     gene            11539..11733
                     /locus_tag="RHX79_003324"
     CDS             11539..11733
                     /locus_tag="RHX79_003324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198460.1"
                     /translation="MDEKITYEEMLEQLDQKGIRVTNGARRLYVALNNGVKAEVLGNC
                     GPATISLVDGMIVVEEQTLH"
     gene            11744..12115
                     /locus_tag="RHX79_003325"
     CDS             11744..12115
                     /locus_tag="RHX79_003325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198461.1"
                     /translation="MGKKVHIICGKCGSDEMNFVINEHCPDDPQNVASMSCSNCCELT
                     GIAEWSEFNGRELKGEAVALSTPANVNALLGLLRQAMDSVEYRLYGGDMSLSGNDAAE
                     LIDLQERAEKVLSVLRSDQHE"
     gene            12108..12578
                     /locus_tag="RHX79_003326"
     CDS             12108..12578
                     /locus_tag="RHX79_003326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198462.1"
                     /translation="MSDLYEPLEFVFCGFRKGDAGLFISVATLRDGVLGREMYFSKGK
                     SKRRWVVGGIYSGASFSDNGAKGLDDAHYVKAWEVQGDKIEWQAKSEQAEALARSEKL
                     EADDRKRNELEELMLPIRKQYGALTKRRDRAGAAALEEAVLRALRAPIRKAEEK"
     gene            complement(12593..12928)
                     /locus_tag="RHX79_003327"
     CDS             complement(12593..12928)
                     /locus_tag="RHX79_003327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198463.1"
                     /translation="MKHVLNIALMAVVILGLAMLEATNWGYAVLAIPAVIWAKSVLNL
                     LHKLPVLAAAFWILVAVFAWQAALVGILFYGVLATPKAPANTNGKKSRKANLMGTYSY
                     DFKTGECFS"
     gene            13025..13513
                     /locus_tag="RHX79_003328"
     CDS             13025..13513
                     /locus_tag="RHX79_003328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HDV2198464.1"
                     /translation="MSAIISKCGMYRYRLERDVQPEGLVFGYFGVNGSTATATEDDHT
                     VRKWIGFTKVNGGRRFIVGNAFAFRATDVRELATAVDPVGPENEIHLERIIRDADVLV
                     PCWGSRTKLPKSLHVHLDRLLEQLVASGKPVLAFGVTGSGDPKHPLMLGYSTKLVPWG
                     GK"
     gene            13516..14013
                     /locus_tag="RHX79_003329"
     CDS             13516..14013
                     /locus_tag="RHX79_003329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198465.1"
                     /translation="MSMLEARYFVAKISDAQAVLCDEELATLERLIRKVDDGRRANGK
                     SSLTCVVVEEDWPNWQQTVDSVLSLADGKDNDWTNATPEQIKAFWVDDSVWKTLDGRD
                     KWIEDLDLLVDGSPVASEWEPFGLESGQSVVIRGGWIEGNALSDDGVPLVQAFVAWKQ
                     GQDNH"
BASE COUNT         3640 a         3342 c         3995 g         3197 t
ORIGIN      
        1 ttttcagaac gactaatcac tcaggagaac ttgataagca ccagaaagca atctaaaggt
       61 ggtttttcgg tgaggttagt tcaggggcaa cctgccgctg ctgattggaa atcatcaaga
      121 agtggctttt tggtggggtt acggtttgaa ggggtgagta tgtgggaacg ttgcacggtt
      181 aaagggggcc gcacatgaaa acgataaagc ggttcatcgt atgggtgaat tacggtcttg
      241 agggttggag cattttcgga tcgagcgatg actgggatga agcggtatcc atccgttcgg
      301 aagcgataga cgaatgcaat attgacgagg aagacatcat cttggcagaa aacaaaaacg
      361 agctggtggt aaaacctgcg gccaagcaaa tgacggagtg gcaccgggaa ctggaagccg
      421 tccttatgac cttggatgac tgccagatgg aatgtgacgg tatgacatgg gcagtaagcc
      481 acctactcaa tgaagcgggt gtacctcatg actgcatgta tggctttgtg cgaaacgaac
      541 agaccaagga catcgtgaca ccgcatttct gggttgtcct ggatgatggg tggctggtgg
      601 atctgaggct acgcatgtgg ctgggcgatc acgacaacat tcctcacggg gtattccatc
      661 ccgataacga gccaggactt ttctacaagg gagacccggt tcaaaaccat aaagggatga
      721 gactgggcaa agccgtcctg gacatcatga ccgacggaaa actttcacat gtgaaagttc
      781 ctgaacgaca agacggagag taatagcgtg gaatttgatt acgacaagtc agtatcaaac
      841 gcacatcttg aggccgcagg ctggggtatg gatgccttta accactccaa cccatttgag
      901 agtcatgtca tctatgtgcg tgactaccgc aacgatcaca tccgcctgtt caccatcaag
      961 caggctgact tcgacacgat aaagctgccg cttcacctta cctccgacat gctggcttcg
     1021 gtgatcgctg agttcgtatc gaaggcagca aaagggaagt tgaatacgaa ggagtccgac
     1081 acgctggctc ctgccttggt tggctatgcc aaatcaacag aaacctaccg gagctggcgg
     1141 agagtttctg gagcaacaga gcgattgcat atggtcatca atatctatgc gggttctgaa
     1201 ttgctgagac ctttcatcgc tcgggctcct gagaccgtcc tgacgaccca agagctactg
     1261 gtcttctcat cacaggttaa gagcatggat gtatccaatc atccagagtg gtttaggggc
     1321 cggaggtagt catgaagcca gttctctgga tattcgtcct gatcatcgcc cctttcgtca
     1381 ttgcgaaagt ggaccaatgg cgcaaacgcg gcattggaga cacctgggcg tggtggaaat
     1441 cagagaacat gccttatgag ctgcgctcgg ccactctgtt tttgtccgaa caggacatat
     1501 caaccacaca gccggtgccc atgcacggca gggttgatca ggtgtaccaa accaagaatg
     1561 gggttctcat tcccttggac accaagctgc gccaggtaaa ccacatctat gagtcggaca
     1621 ttatccagct ctcggtttac cgggtaattc tgtcacacaa gtacaaggca cccgttgcca
     1681 agtacggcta tgtccgaacc gttgttgaga cagcggacgg ggatagagtc cgttacatca
     1741 agacaaacct tctcagcgaa aaagaagtgg tcaagctgtg gcaccgctat caatccatcc
     1801 gttctggtca ggtaaaaacc tcctgttcct gtggcggaaa gtttcacatg tgaaagttct
     1861 ggattgaatc agggttgccc gaattgggca gctaggcggg gttgcatttt tgaaaagtcc
     1921 tgtacgctgg ttggtatagg aggtgaatag tggcccagct taaacataac cgcttcgtca
     1981 tgttggggtc cttggtagcg acggtcgtag ctgccgccaa tggcttgagt tttctcaccc
     2041 ttatggctgg tggaatgacc cttctccagt tcatggcttg gaagcaacaa gatgctgtcc
     2101 ggagccggtt taaagctgcg aaggatgcgt ttgaagcgtt gaacgtcatt gcgttcgaca
     2161 agcactgggt aggttcaacc gcgacggtcg ccaaagtgtc gaacatgatc actccgcccg
     2221 aacgactgga taagccctgg gcggtgcaag ttctggccgt gaccaaaggt gggacgtggt
     2281 tcgcggtgga tctgcaagtg accggcactg acaaggttca gatgcttagc ctccaccagc
     2341 ttagtgaaaa ggcggcaaag accatgctgg ccttcgacct cgaagtgtat gagaaatttt
     2401 tcggaaaacc tgatgttgca tgaggacaat gtgatggaaa aagtcaaaag cgtagatgcc
     2461 gtggagttca cggcagcaga taagaaggcg atgacccatg cggcatacgc ccagtgtttc
     2521 ttcattctgg cccaagtgat ggcattccct tccctggggg tggctggcgc tatggttgct
     2581 gctctgtgcg gcatgatgcc gtggttgacc aagttcgcca aagaggctcc atcgaaagcc
     2641 tttggcatgg tgatggcttc actctgcctt gctcctgtgt acgggaaact ctgtgagctg
     2701 gtggtccacg cgattcaggg agcttgagct tatgggggta gtacgagttc cctacctctt
     2761 ggctgagctg aaagaacgcg gatgtgctga tgaatctgct ctggcgcagg ttatgcagcc
     2821 tggatgccga attggagagg aagacctgcg gaagttggcc gcaaatttag ggcttgaagt
     2881 gtccgagctg gcaccagcgc cagagaacgc ggccaacacc cggttcaaag caaagctgag
     2941 aggaggtttg gcctcctttc tttttgagta cgacggctgt ttccgacatg cagaaggctc
     3001 cagccatgca gaaatgttgg gtatcgagca agaagacgac ataggtcttc cgagtcgagc
     3061 tgctgacgcc atgctcctgg agaagacgct ttaccaggta atcgctcggg ctaagtacat
     3121 gctcggcaaa atcgacagca agtttgtcag gtcagaacaa gcaatcgagt tccgtgagca
     3181 acttgctcct gggatcttca aaccaggtta cagaggtttc cgattcaagg aggctgccgc
     3241 tggtgatttg cctactgtca tgattgacgg tcggaagttc aactgcgttg ccagcatagc
     3301 cagagcacat ggacttgatc cggtaacggt gcgtaggcgc attgcggaca ccgggaaggc
     3361 cgcagacaaa ctctccaatg atgagtggaa gctcatcctc gccaagaaaa aaggtaaagg
     3421 gaaacccttc acctatctgg acaggaccta cagcaacatt gctcagttct gtcgtgagca
     3481 tcagctcaac accaaccttg tttaccagaa agtcaaagac cgggctgata gcgctgatga
     3541 agagttctgg ggactgataa tcgaaacatg caaaaggaaa aactaatggc agaaaacaaa
     3601 gagatcccct gggagaaaga actcattgag aagtacatgt tcaccctgca taaagagcag
     3661 gtgaaagacc ggcgctggcg gaccatgttg cgtgtgcttc gcgcatctgg tttcgtgctt
     3721 ctcatgatcg gcttcatcat tttggcatct aatccgggtg ggatgccgtg gcaaagcgcc
     3781 aaggcaggag cccctcacac cgcgtatatc aacatccgtg gtgaaattgc tgctggcact
     3841 ctggccgatg ctgatcacct tatcccgtcc atccaagctg cattcgacaa cccgaactca
     3901 caagctatcg tgcttcgcat aaacagccct ggcggtagcc cggttcaagc aggacggatt
     3961 tatgacgaag tgaaggcgca gcgagccctt catccggaga aaaaggtcta cgccatcatt
     4021 gatgacatcg gtgcctctgg cggttactac atcgcctctg ctgcggatga aatctatgct
     4081 gaccgcgcca gccttgtcgg ttctatcggc gtcatcagct cggggtttgg attcaccggc
     4141 ttgatggaca agctcggcat cgagcgccgg gctatcactt ccggagagca caaagcgctt
     4201 ctcgacccat tctcccctct tacctctgac atgaagaaat tctgggaggg cgttctatcg
     4261 aaaacccacc agcagttcat cgaacgagtg aaggctgggc ggggtgatcg actgaaagac
     4321 gacccagagg tgttttctgg attgctctgg aacggggagc aggccaaaga cattgggctg
     4381 attgatggcc tgggtagttt gaactccgtg gcgcgagacg tcatccacca gagcaacttg
     4441 gtggactaca caccaaccga agacatcatc cggcgactga cccaacgagc gaagctcgaa
     4501 gccagttcct tcgtgcaaga actcagcgct gtgaaagttt actgatagga gcagtttgat
     4561 atgacagaac aaagtaccaa atcactacgt ctcggggttg ttgccgccat tcttttgggg
     4621 ctcgtaggaa ccgggttcgg gatctaccag ttcgtgaaag agaaggatct ggcgcaagag
     4681 atcgccaacg tgaagtctac ggtcaaccag gtgaaggatg ccgaaggcgt caccttcaaa
     4741 agcaaggcag agtttgaagc tgctgtggcc gaaagcatca acaagtttgt cgcgcagaaa
     4801 caacaagccg acatcgatca gaagtatgcc cagttcgagg cagcacctga gaaggtcgaa
     4861 gaaggcaaac acatctacgg ggaccttggt gctcggttca cgctggtgga gttctccgat
     4921 atggagtgcc cattctgcaa gcgattccac gacacaccca aacaaattgt ggatgccagc
     4981 aaaggcaatg tgaattggca gtggaagcac atgcctctcg atttccataa cccggcagct
     5041 cacaaggaag ctctggccgc tgaatgtatt gctgagcaga agggcaaccg tggcttctgg
     5101 gtcttcgtta acgacatttt ccaccatacc caggggaatg gtggcggtgt tgctgacctg
     5161 gcctctgttg tcactggtgt tggtgctgat ctggatgcgt tccgggagtg cctcggctca
     5221 ggaaagtacg aagacaaggt tgaagctgac atccagaaag ccaagagcta tggcgtcaac
     5281 gggacaccag ccacttttgt agtggacaac cataccggca agagccagct tctcggcggc
     5341 gctcaaccgg cgcaagccat catggccgtg atgcgaaaaa tgatgattga gtcgcaacaa
     5401 gacgactccg cgaaccaata aaaactttca catgtgaaag tggagtgaga actgatgatc
     5461 aagattacaa ctaaattggg atgccttctg gcggggctgc ttgtcctgtc ggcttgctca
     5521 agcgtccctc agccaaacaa cgaatacgcg aaggccttgg atgataccaa acaggtatgc
     5581 gctgcctgtg ccctggttgg taatgacctg ctggttgccc tcaacaagtc atgcgacacc
     5641 ccaatgaccc ccgagactct tacaagcgtc atgaacagta acccgatgtt tgccgccatg
     5701 atggcaatta actccatagg tggaaccgac ttctatcagg tttaccgtga tgcggccata
     5761 gacaccctgc ggtgcaatga aatggacagt tggcctgatc ggaccaaggt gcgtttccag
     5821 cagcccgaca tgcaaaaggc gctggccttg agggtttctg ccagacagca gaaggcaaat
     5881 taactttcac atgtgaaagt caggctctcc ggggcctgat ttcactatga ggtgaatcta
     5941 tggagttaca agaagcaaaa gaggctctcg atagccttca tccacacaag gcctcagcgc
     6001 ctttgaggct tgtcatccac cagccaggtg ggattggtgg aacccctaca gtgggggtga
     6061 aagctattca cgcaggcttt gactgggaca gcaacaccat cctgatctat ccggaagagc
     6121 agctcacccg gttgacgccg gatgaggtcg ccgccatcac gaagtcagta tcgaaaggac
     6181 agtcctggca ttcatatcag cagttcaaga agtatcggga gcagttggcc gaagccacgg
     6241 aagaaattaa taggctcagg gctgagctgg gcaggtatca gaataacggg agggggtaat
     6301 gctaaaacgc ggaattatca atctcgctgc tagttacatc attgttgatg ccctactccg
     6361 gaatgcagca atttggatct ttggcttgtc cttctccgtt ggtggcactt acgtcactgg
     6421 cgaggccagt acatgggtcg tttacctagc cacttctggt gccatgacac tctgttctgt
     6481 cgtaacagcc tacctgctcg tgacctatca ccgctggggg ctgatgacgg ccagggtctg
     6541 gttgctattg agtgcctgcc taaacggcta tgccgtctat ttgagtagcc acaacatcca
     6601 gttggtggtg gcactgcttt ccagcctgtt tattgctttg tggatgctca agacccttga
     6661 gcaaccagca gtgaagggga cgtacaaggt aatcgctgat cttcaccgtc agctatgggg
     6721 aatgttgaag gggcaaacac aatgacgacg aatactcaaa acgcgaacgc caaccaggtt
     6781 cggtctttac gcgacatgct tgtccccgcc ctgttgttct atgtggtgat gacggccatg
     6841 tttgtgggtc ttgacgcatt catggataaa cccaccagca tgaacctgcc atttatgccg
     6901 ttccttgtct cgatggtgag ttttaccagt gacgcacgtc gagcgtggga ctggcgaaac
     6961 gggaccaagg ttgtagctgt attgactgcg gtagccatgc tgttggcatt catctatcag
     7021 ctcgcggtcg gagagatgaa tctcttaggg gttggtatat acccggccac agccatcctt
     7081 ctgttggcaa tctcctgggt gattcgcgct atcggaaaga cagcaccttt ccagttcctg
     7141 gggagacacc tggcgcggtt tggtgcatcg aagtgggtcc agcgtaccgc cgcagtcatt
     7201 gtgctcgcgg gaggccttgc catcactatc tatgcctact ggcttaacca cgggagctga
     7261 tgatgatcat tgcaacgaag aacggctttc tggtggccgc agaactaatc agggaagagg
     7321 ccgggtactg gctactacag cctcgtgacc aaaagacgcc ggtcagggtg aataagcagg
     7381 ataacaataa acgcgctttc acgcatatgg gagacgccct tcgctgggcc ggtgatcctg
     7441 agcttgcaaa gcaattcgat gccgaggggg aagaacatgc aaattcgtga ctacatgaca
     7501 aagttgtttg acgcatttgg tgatgtggag gaagtcaccc gagaaatgct tctggagcag
     7561 gcggagctca ttcatacgat cagcgataag tgtcagagca caggcctgtt tctggatagt
     7621 caggttcgtt tcaaccagtt cgttcaagag attgaggctg acgacaaggt agaggatcgg
     7681 ttgcttcatg cttggtgctg ggtaatggac cgaatagtga aggctccaac atcctttcac
     7741 atggatgggg ctgtgatttt gacaatgcct ctggtcgcca gatacctgcc accggttgaa
     7801 caggagccgg aaaccatcgt ggtgaatctc gatgaggact acaaggctcc tgtaggcaac
     7861 caaacgctct gcgagctcgt tatggaacgg aggcattggc cgcaaggtgc aacctgtgcg
     7921 acccaagaag cggacggggg agtcctctac tgggacgccc cggttgatgt ggtagaggaa
     7981 ggcagaaagg tcgccggtaa gcacggcatg atggccgaga tcggattgaa acatcaggtt
     8041 gatgcctggt atgcagatat ggacgaaaca cggctcgcaa ccgattggaa caccgccgtc
     8101 attacgcctc actgcttgct gctttcctat ctggatgtgc ttcaaaagaa caaagttccc
     8161 tttgatgaag gtgtgcagct cgctgccgaa tgggtgaagc aacttggcgg ggaatttcgt
     8221 gaagacactg aggaagcgcc ggaagctgag gcttcagtgc tttccctggg gagagccacg
     8281 gctcattgct ttaaacccta tccggacaca aaaaatttct attacgaggc ctaagcctca
     8341 cccaaacagg aggatcaaca tgcgatacca ggtatttaaa acgaaggaag ggggccagcc
     8401 ggtgtttacg gcaccgtggt actggttggc ctctgccatt gctcactggt catctcttaa
     8461 ctgggatgcc tgtcgaatcg tagacagcaa ggtggatgaa acaaggctct gttgggccaa
     8521 ggctctaccg gctgggaaaa aaaagtaatt tggatggagt gattatgagg ttaggttttg
     8581 tgaaaaatac gggggtttca gcgttcctgg tagccatgct ggtggtggcc cctcaggtat
     8641 gggcagaaac ctttactgcg aaggttgtgg gggtgtctga cggtgatacg gtcaaggtcc
     8701 tgactgaaca aagctgtgac tccgggaaag attgccggag cggcaaaatc cagtaccggg
     8761 taaggctggc ggaaatcgac accccagaga agaaacaacc ctacggctca aaggcgaaac
     8821 aggcgttgtc cgatctggtg tttggtcgaa tgattaaagt cgagcaaatc gacaaagacc
     8881 gttatggccg tctggtcgcc aacctttatg tcgatggcaa atgggtcaat gccgaaatgg
     8941 tccgttctgg gagtgcgtgg gtgtaccggc agtacgccaa aacaccggag ctgttcaagc
     9001 tggaggccga agccaaagcc gataagcgag gtctctgggc attaccggaa tcggagagaa
     9061 ctcccccttg ggagtggcga agaaagcact aaccacaccc cagagtatgc aggtgtaaac
     9121 agtaaccaag aaaacaaaca ggaataacga tgaacaaaag tgaactgatt atgaaagtgg
     9181 ccgaagacgc tgacattagc aaagcaaagg ccgaagctgc ggtaaatgcg ctgatcaact
     9241 cagtgacaga ggagcttaaa gcgggtggga cagtagcgct cactgggttt ggtactttcc
     9301 acgttaagga acgcgcagcg cgaaccgggc ggaatcccca gactggagag aacatccaga
     9361 tcgcggcggc caacattcct gggttcaaag ctggtaaggg gttgaaagac tccgtgaact
     9421 agatcttaat catgtgacac atgaataagg tttacataag gctccttcgt gggagcctta
     9481 ttcatatcag acatgaataa ggggaaggga tgagattgtc gtcaactcaa aaagacgttt
     9541 tgttcattct atacgcaatt gaggccggtg gaaaagccga gcctgtacca ggtgtaaaaa
     9601 tactggagat gatcaattca gctcgccaga gcggtattca tggaacgaac ttccgaacgt
     9661 catgccacac gctggtggag aacggcctgt tgaacaagta ccggaatgct tctctaaagc
     9721 tggcctttag gctgaccgac gatggcaggg aacgtgcagg agagatatac cgaaaacggc
     9781 tggaagaaga gcaagagaag taatacgccc cataacgggg cgtatcgagt taaacggcaa
     9841 agccgtagtg ggtgccgtcc ggaagttcaa catcgaggcg tagcttgcca ccggaggcct
     9901 caacgtaccg cttaatggac gacagcttga gatctcgtcc aggtttttcc atctcggaga
     9961 ctgtcggctg tctcacaccc agagatgcag caatttcccc ctgggtaagg ttcatgcgat
    10021 cacgaagctc tgccaagtgg atgttcagta acatctcagt ggccgctttc tgtgctttgg
    10081 caacaacctc aggcttttct gttgccagca tttggtcaag agttcttgcc ataacgtcac
    10141 tccttcttca atttatccaa gtgcgccgca aactcacggt ctgcaattgg gatcattact
    10201 tcataaaacc ttttctcgtc cccggtcttg ttaccggcgc agagaagaat ccccttacgc
    10261 tttggatcga acgcaaagaa cgctctgata ggatctcctt tgctttggac ccgaagctct
    10321 ttcatgttgc tgtaggatga accgttaaca gtatccgcgt atggcctcga cagcatgggg
    10381 cctctatctc gcagcaccat catcgaagcc agcacgtttg ctctatcggt atcatccaga
    10441 gcatcgaacc actcatcaaa ggtgtcggtt gtctcgatga cccacatgat ttctccttac
    10501 ttaatatagg tgcaatccta tatagattca aacctataat caagaaaaat cggcggcgat
    10561 gggggccgaa atgtcagtaa gtagtcatgt gactaaaata gggggtagaa taagcctcga
    10621 tatagtcatg tgactaaaag gtgtcctgaa tgaacaacct acccctactg ctcgatgcaa
    10681 gagaagccat tgactactac caccagcatc caggcatgac tgatgcagaa aaggcctatg
    10741 tggtcgcgtt cctaagcgga gaggggcgtt caaacagtca gatcagagag gatctgggta
    10801 ttgagaaggt ctatacggtt acacacctga aacgcgccgg tacgctatcg gaggaagagc
    10861 taacactctg gctcagaaat ccacgcaaga tcaccctggg gcatgtgagg gccgtggcta
    10921 agttaccttt cagcaagaga gaaaagctcc tgagggatct cctgcatacc aggacaccgg
    10981 ttcataaatt tgaggcgata gcgaagggca aagaagtgga cagggatgca gacattaagc
    11041 gcctggagac cctgatgagc gatgctacgg gtaggcctat caaagttcgc tataaccccg
    11101 cgaagcgctc cggggaactg acgctgggat tcttcacgct cgatgacctg gatgacgtgt
    11161 gcaaggcttt ggggtttgat ccaagcgagc agatgtaaac cagaaaactt tcacatgtga
    11221 aagtcttgca aggtgtcttt ttattgttta cagtatcata aaatgaatct gtaaaggtgc
    11281 gcgatgaatg tgcttccaac gaaaagctgg ccttgggcgt tataactcaa ccagacctga
    11341 gtggctggcg gcgtaccgaa acgcaagatg tatgagaagc tcaggtaaag aacctgatgc
    11401 ttctctttcc gggatagctt ggaaggcgca actcattgtt gcccatgaaa gaggcagaat
    11461 tgacagcctg gctgtccctt tggatgccag attgatagca aagaacctca tcgacgagat
    11521 ccttgctgag gagaactgat ggacgaaaaa attacctacg aagaaatgct tgaacaactc
    11581 gaccagaaag gcatccgcgt caccaacggg gcgagacggc tttatgtcgc gttgaacaac
    11641 ggagtcaaag ctgaggtgct gggtaactgc ggtcccgcca caatcagctt ggttgacggg
    11701 atgattgttg tggaagagca gactctccac taagggcagc agcatgggca aaaaagtaca
    11761 catcatttgt ggaaagtgcg gcagtgacga gatgaacttt gtcatcaatg aacactgtcc
    11821 agacgatccc cagaatgttg ccagtatgtc ctgctcaaat tgttgcgaac tgacaggcat
    11881 agccgagtgg tcggaattta atggacgtga gctgaaaggt gaagccgtcg ccctatcaac
    11941 accggcaaac gtgaatgctc ttctaggatt gcttcgccag gcgatggaca gcgttgagta
    12001 tcgcctctat ggcggggaca tgtcattgag cggtaatgat gctgccgaac tcatagacct
    12061 ccaggagcga gctgagaagg tcttgtctgt tcttcggagt gatcagcatg agtgatttat
    12121 acgaaccgct tgagtttgtg ttctgcggct ttaggaaagg ggacgctggg ctatttatct
    12181 cggtagccac tttgcgcgat ggtgttttag gccgtgagat gtatttctca aagggaaaaa
    12241 gcaaaaggcg ctgggttgtc ggtggcattt actcaggggc ctcgttttcg gacaacggag
    12301 caaaaggtct ggatgatgct cattacgtta aagcatggga agtgcaaggc gacaagatag
    12361 agtggcaagc aaaaagcgag caagccgaag ccttggcgcg aagcgagaaa cttgaagccg
    12421 acgataggaa gcgcaatgaa ctcgaagagc tgatgctacc catcaggaag caatatgggg
    12481 cattaacaaa gcgacgtgat agggcagggg ccgcagctct tgaagaagct gtcctgagag
    12541 cgctgagagc gcccatcagg aaggctgagg agaaataacc gtggagccag tcttagctaa
    12601 agcattcgcc ggttttaaag tcgtagctgt aagtgcccat cagattggct tttcggcttt
    12661 tcttgccatt ggtgtttgct ggcgctttag gggtcgcaag tacgccatag aacaggatac
    12721 caacaagtgc cgcttgccac gcgaaaacag caaccagaat ccaaaaagca gcagccagaa
    12781 ccggcagttt gtgcagaagg ttgagcaccg acttggccca aatcactgcc gggatagcca
    12841 gcactgcgta accccagttg gtggcctcaa gcatagccag gccaagaata acaacagcca
    12901 tcagcgcgat attcagtaca tgtttcatgg tcatctctcc ttttcaactt acacttttat
    12961 cctatcacag cattaaaaaa tgcaactgtg aaagggcatt tttcattcaa aaagaggtga
    13021 cactttgagt gcaattatca gcaagtgcgg catgtacaga taccgtctgg aaagggatgt
    13081 gcaacccgaa ggccttgtgt tcggttattt tggtgtaaac ggctctacgg ccacggccac
    13141 cgaggacgat cacacggtca gaaagtggat agggtttacc aaggtcaacg gagggaggcg
    13201 attcatagtc ggtaatgctt ttgcttttcg ggcgaccgac gttcgagagc tggctacggc
    13261 ggttgatcct gtcgggcctg aaaatgaaat ccacttggaa aggattattc gggatgctga
    13321 tgtcttggtg ccctgctggg ggagccgaac taagctgcct aagtctttgc atgttcattt
    13381 ggacaggctt ttagagcagc tcgttgcatc tgggaagccg gtattggcat ttggcgtgac
    13441 tggttcgggg gacccgaagc acccactaat gcttggatat tcgacaaaac ttgtgccctg
    13501 gggaggaaaa taattatgtc gatgcttgaa gcacgttact tcgtggcaaa gataagcgat
    13561 gcacaggccg tgctctgcga tgaggagctg gcgacactgg aaaggctgat ccggaaggtt
    13621 gatgatggcc gcagagcaaa tggcaagagc tcgcttactt gcgttgttgt cgaagaagat
    13681 tggccgaact ggcagcaaac ggttgactct gtactttcac ttgctgacgg gaaagacaac
    13741 gattggacca atgccacacc agaacaaatc aaggcctttt gggtcgatga ctcagtttgg
    13801 aaaactctgg atggccggga taaatggatt gaagatctcg acctgctggt ggacggttcc
    13861 ccggtggctt ctgagtggga accttttggc ttggaatcag ggcagtctgt cgtcatacga
    13921 ggcggatgga tagaagggaa tgccttgagt gatgatggcg taccgctagt gcaggcattc
    13981 gtcgcttgga aacagggcca agacaaccac taaaggaaaa ttacttcgga agggcggcta
    14041 tggccgcttt ctttttaata tttacagcat cacataatga tactatgatg ttgttaattt
    14101 acttggggag gcgcttatgc tcactgctaa atgtataggg tgcggatgca ccgatgatca
    14161 cgcttgtgtt gaaa
//
LOCUS       DAPGWB010000116        13745 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.117, whole genome shotgun sequence.
ACCESSION   DAPGWB010000116 DAPGWB010000000
VERSION     DAPGWB010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13745)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13745)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13745
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.117"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(143..1501)
                     /gene="plaP"
                     /locus_tag="RHX79_003330"
     CDS             complement(143..1501)
                     /gene="plaP"
                     /locus_tag="RHX79_003330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PlaP"
                     /protein_id="HDV2198466.1"
                     /translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS
                     GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS
                     LLDYLFAPMINILLAKIYFEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIV
                     VLQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD
                     GISNLSEETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEI
                     MLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR
                     TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLK
                     DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAAIGLIYLACVTKSFRNPVPQYED
                     VA"
     gene            complement(1491..1553)
                     /gene="yoeI"
                     /locus_tag="RHX79_003331"
     CDS             complement(1491..1553)
                     /gene="yoeI"
                     /locus_tag="RHX79_003331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YoeI"
                     /protein_id="HDV2198467.1"
                     /translation="MGQFFAYATVITVKENDHVA"
     gene            complement(1768..2697)
                     /locus_tag="RHX79_003332"
     CDS             complement(1768..2697)
                     /locus_tag="RHX79_003332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2198468.1"
                     /translation="MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESD
                     LNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT
                     FPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
                     FSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQE
                     AITVFDFKTKLELQISGLGCGYLPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQ
                     TAGLASGWWRDEILANSAIAGVYAKSDDGKSAI"
     gene            complement(2743..3567)
                     /locus_tag="RHX79_003333"
     CDS             complement(2743..3567)
                     /locus_tag="RHX79_003333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDV2198469.1"
                     /translation="MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEASRMSG
                     IDSYLLRMEPELVCDSDDLDALMDVDALVITLPARRSGPGDEFYLQAVQELVDSALAH
                     RIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLA
                     GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHP
                     ARNVFYPQMARLLGLEPPQFRNSLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE"
     gene            complement(3650..3904)
                     /gene="yoeB"
                     /locus_tag="RHX79_003334"
     CDS             complement(3650..3904)
                     /gene="yoeB"
                     /locus_tag="RHX79_003334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin YoeB"
                     /protein_id="HDV2198470.1"
                     /translation="MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGK
                     PEPLKHNLSGFWSRRITEEHRLVYAVTDDSLLIAACRYHY"
     gene            complement(3901..4152)
                     /gene="yefM"
                     /locus_tag="RHX79_003335"
     CDS             complement(3901..4152)
                     /gene="yefM"
                     /locus_tag="RHX79_003335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoeB-YefM toxin-antitoxin system antitoxin YefM"
                     /protein_id="HDV2198471.1"
                     /translation="MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEE
                     YNSLEETAYLLRSPANARRLMDSIDSLKSGKGTEKDIIE"
     gene            4435..4485
                     /gene="hisL"
                     /locus_tag="RHX79_003336"
     CDS             4435..4485
                     /gene="hisL"
                     /locus_tag="RHX79_003336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="his operon leader peptide"
                     /protein_id="HDV2198472.1"
                     /translation="MTRVQFKHHHHHHHPD"
     misc_feature    4461..4584
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            4631..5530
                     /gene="hisG"
                     /locus_tag="RHX79_003337"
     CDS             4631..5530
                     /gene="hisG"
                     /locus_tag="RHX79_003337"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDV2198473.1"
                     /translation="MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAE
                     NMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFG
                     GCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPR
                     AGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQ
                     GVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWE
                     TMEKLKALGASSILVLPIEKMME"
     gene            5536..6840
                     /gene="hisD"
                     /locus_tag="RHX79_003338"
     CDS             5536..6840
                     /gene="hisD"
                     /locus_tag="RHX79_003338"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDV2198474.1"
                     /translation="MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVK
                     ARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQ
                     KLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLC
                     SPPPIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK
                     RQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPDAD
                     MARRVAEAVERQLAELPRAETARQALSASRLIVTKDLAQCVEISNQYGPEHLIIQTRN
                     ARELVDGITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV
                     QELSKEGFSALASTIETLASAERLTAHKNAVTLRVNALKEQA"
     gene            6837..7907
                     /gene="hisC"
                     /locus_tag="RHX79_003339"
     CDS             6837..7907
                     /gene="hisC"
                     /locus_tag="RHX79_003339"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDV2198475.1"
                     /translation="MSTVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVE
                     FQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDA
                     ILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTG
                     QLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFAL
                     AGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAER
                     EYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCL
                     RITVGTREESQRVIDALRAEQV"
     gene            7907..8974
                     /gene="hisB"
                     /locus_tag="RHX79_003340"
     CDS             7907..8974
                     /gene="hisB"
                     /locus_tag="RHX79_003340"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416526.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDV2198476.1"
                     /translation="MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQ
                     KAGYKLVMITNQDGLGTQNFPQTDFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD
                     CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGE
                     QLTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEI
                     NVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGR
                     PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG
                     RTLRQAIRVEGDTLPSSKGVL"
     gene            8974..9564
                     /gene="hisH"
                     /locus_tag="RHX79_003341"
     CDS             8974..9564
                     /gene="hisH"
                     /locus_tag="RHX79_003341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDV2198477.1"
                     /translation="MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFL
                     PGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDED
                     VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG
                     EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM"
     gene            9564..10301
                     /gene="hisA"
                     /locus_tag="RHX79_003342"
     CDS             9564..10301
                     /gene="hisA"
                     /locus_tag="RHX79_003342"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDV2198478.1"
                     /translation="MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAE
                     VLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVG
                     STAVKSQDMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY
                     LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTG
                     VRGVIVGRALLEGKFTVKEAIACWQNA"
     gene            10283..11059
                     /gene="hisF"
                     /locus_tag="RHX79_003343"
     CDS             10283..11059
                     /gene="hisF"
                     /locus_tag="RHX79_003343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDV2198479.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA
                     DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLDDAAKILSFGADKISI
                     NSPALADPTLITRLADRFGVQCIVVGIDTWYDGETGKYHVNQYTGDESRTRVTQWETL
                     DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE
                     AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC"
     gene            11053..11661
                     /locus_tag="RHX79_003344"
     CDS             11053..11661
                     /locus_tag="RHX79_003344"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDV2198480.1"
                     /translation="MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDK
                     TIESGKVTFFSRTKQRLWTKGETSGNFLNVVNIAPDCDNDTLLVLANPIGPTCHKGTS
                     SCFGETAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA
                     ATVHDRFELTNEASDLMYHLLVLLQDQGLDLGEVIDNLKNRH"
     gene            complement(11700..12815)
                     /locus_tag="RHX79_003345"
     CDS             complement(11700..12815)
                     /locus_tag="RHX79_003345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004184789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDV2198481.1"
                     /translation="MRVLHVYKTYYPDTYGGIEQVIYQLSQGCARRGIAADVFTFSPD
                     KDTGPVAYEDHRVIYNKQLFEIASTPFSLKALKRFKLIKDDYDIINYHFPFPFMDMLH
                     LSARPDARTVVTYHSDIVKQKRLMKLYQPLQERFLSGVDCIVASSPNYVASSQTLKKY
                     LDKTVVIPFGLEQQDVQHDPQRVAHWRETVGDKFFLFVGTFRYYKGLHILMDAAERSR
                     LPVVVVGGGPLESEVRREAQQRGLSNVMFTGMLNDEDKYILFQLCRGVVFPSHLRSEA
                     FGITLLEGARFARPLISCEIGTGTSFINQDKVSGCVIPPNDSQALVEAMNELWNNEET
                     SNRYGENSRRRFEEMFTADHMIDAYVNLYTTLLESKS"
     gene            complement(12825..>13745)
                     /locus_tag="RHX79_003346"
     CDS             complement(12825..>13745)
                     /locus_tag="RHX79_003346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016809192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDV2198482.1"
                     /translation="LIEAYRLLHPRRQAWALRDYKDYIYHGPNFYLPHKLERAVTTFH
                     DISIFTCPEYHPKDRVRYMEKSLHESLDSAKLILTVSDFSRSEIIRLFNYPEERIVTT
                     KLACSSDYIPRSPAECLPVLQKYQLAWQAYALYIGTMEPRKNIRGLLHAYQLLPMEIR
                     MRYPLILSGYRGWEDDVLWQLVELGTREGWIRYLGYVPDEDLPYLYAAARVFVYPSFY
                     EGFGLPILEAMSCGVPVVCSNVTSLPEVVGDAGLVADPNDIDAISAQILQSLQDDSWR
                     EIATARGLAQAKQFSWENCATQTINAYKLL"
BASE COUNT         3439 a         3625 c         3581 g         3100 t
ORIGIN      
        1 attcatgact ggtggaatgc agaccaataa ccaaattctc taaattagaa caaatggtta
       61 ttaatgagga tgtcgataaa aaagaataaa aaaaccggag ccaaatattc attcgactcc
      121 ggtttattat tagaaaagat gattatgcta cgtcttcgta ctgcggaacc gggttacgga
      181 agctcttggt gacgcaagcc aggtaaatca gaccgatagc agcccagatc agacccagaa
      241 ccattgagct ttcttccagg ttaacccaca gcgcaccaac ggtcagcgca ccacacatcg
      301 gcaggaacag atactggaag tgatctttca gcgtcttgtt acgcttctca cggatccaga
      361 actgcgagat gaccgacagg ttaacgaagg tgaacgccac caacgcacca aagttaatca
      421 gcgccgtagc cattaccagg tcgaagttga ttgccagcag ggcaatcgcg ccaaccagga
      481 tgatgttcat tgccggagta cgccatttcg ggtgtacata accgaagaag cttttcggga
      541 atacgccgtc acgacccatt acgtacatca gacgcgcaac acctgcgtgc gccgccatac
      601 cggacgccag tacggtaatg gtggagaaga tcagcgcacc aacctggaat gctttacctg
      661 ccacgtacag catgatttca ggctgtgacg catccggatc tttaaagcga gagatatccg
      721 ggaagtacag ctgcaggaag taagttgcaa agatgaagat catgccgcca atcagcgcgg
      781 tcaggaaaat cgcacgcggg attacgcgct ctgcatcttt ggtttcttcc gacaggttgc
      841 tgatgccgtc aaagccggta aaggagaagc acaggattgt cgccccggta atcatcggga
      901 taacatgcgc atcgccagac cagaacggac gagtgctcgc cagcgtacca gcgccttcac
      961 cttcaaatac gccataaaca accatgccca gaatcaccgc gatcagcact acctgcaaca
     1021 cgacgattac agtgttgaag ttcgctacgg atttcagact acgcaggtta aaggcggtca
     1081 taaaggccac cagcgccacc acaaacatcc acgatgggat ggaaggcacc agagcttcaa
     1141 aataaatttt cgccagcaga atgttgatca tcggcgcgaa cagatagtcg agcagagaag
     1201 accaacccac cataaagcca accgtcgggc taatggattt ctgggcgtaa gtgtatgcag
     1261 agccagcaga aggatagcgg cgaaccagct tcccgtagct cagagccgta aacaggatcg
     1321 caatcaatgc gaacgcatag gctgtcggca catgaccatc cgtgaggcct gaaacgatac
     1381 caaaagtatc aaacagcgtc atcggctgca tataggcaag acccatcatt acaaccggaa
     1441 ctaacgtaag cgttttacgc aattccacgc gagaggtgtt tggagtaacg ttatgcgaca
     1501 tggtcattct cctttacggt gataaccgtc gcgtaagcaa aaaattgccc catttttttg
     1561 gattcctcag cgacaacaac tgtcgatttt tagtaaatat ctatccggta cgaagcccgg
     1621 cctcttggta tgaatgattg gtttgaagca aaaaataacc gacgctgatg aaacgtcggt
     1681 ttttagtcat tttttgacag cggcgcattg tgcctaaatg ggggggaaat gacaagagaa
     1741 tgagaggctt gtcataataa tttttcttta aatggctgat tttccgtcat cagattttgc
     1801 ataaacaccg gcgatcgcac tatttgctaa aatttcatcc cgccaccagc cgctggcaag
     1861 ccctgcggtc tgttcgttcc agccaatcca gacgggttca aagagagttt gggcgaccac
     1921 tttcttctct attaacgcgc cactatcgag aaaacgttgt gccagataac ggggtaaata
     1981 gccgcagccg aggccgctaa tttgcagctc cagcttggtt ttaaaatcga aaacggtaat
     2041 ggcttcttgt tcgtcgagaa gttgtgaggc cgtagaagcg cctgcctgcg cagtatcccc
     2101 caccacaatc gcccgatatc gcttaataat acgacggttt aacggctctt cttccagggc
     2161 taacggatga tgaggcgcga ccgcaaagac ttgttccaga tcgcccaacc gtgaaaaacc
     2221 aaactcactg gaagatggtg gctcatgcat cgcgccaaca ataatatccg ctcgcccctg
     2281 agtcagggca tcccaggaac caccgagtac gccattgata aacttcaggc gcgtcacgct
     2341 atgatgttga taaaaagctt caatcagtgg cgcaagcaga gaaaaaggaa acgtgtcgtc
     2401 cacgccaatc accagctcgt tttcccagcc ttcatgcagt ttgatcgcct gcttttccag
     2461 ttctcgcacg gtatgcagaa cttcccgccc tttctctaat aacatttttc cggtacgggt
     2521 gaatttagcg cggtgaccgc tacgatcaag caattgaata ttaaggtcgc tttccagctt
     2581 gtgaacggtg taactcagag cggacggcgt cttatagagt ttggccgacg ccgccgcaaa
     2641 actgccttct ttttctaaag catcgaggat catcaacaca tccagcagtg gtttcataca
     2701 cgcccccttg cagtgcatgc ggcgtcctgc tggcgtgatc gtttactcca gcggcattac
     2761 cagcggatcg ggatactggt attcaaatcc cagttcatta caaatccgac tgccatcaat
     2821 aatcttacct ttgccgctgt ccagactatt tctgaactgc ggaggctcca gccccagtaa
     2881 acgggccatc tgcggataga aaacattacg cgcagggtga gctggcgcac atatattata
     2941 gatgtgtccg cctttaggtg cctgtaacaa cagagtgata gcgccaataa catcttctaa
     3001 atggactaaa ttaacaccat gttcaccatc aggcgcggtt tttccggcaa agaagcgtcc
     3061 gggatgacgt cccggtccga ccagccccgc aagacgcaga atatcgaccg aagtaccggg
     3121 taaattgtgc agccagtctt cgagttcttc taatactcgt ccactgttgg tcaccggatt
     3181 acgcggggtg gtttctttca ccgtgccttg cgcgtcgcca tagacagatg ttgagctggt
     3241 gaaaataatg cggggaatac gatgggccag cgcgctatcc actaactctt gtaccgcttg
     3301 taaatagaac tcatcgccgg ggccgctacg acgtgccgga agcgtaatga ccagcgcatc
     3361 gacatccatc agggcatcca gatcgtcaga atcgcaaact aactcaggct ccatgcgaag
     3421 cagatagcta tcaatgccac tcattcggga cgcttcgaca ccatcttgtg tggttttact
     3481 cccggtgact tgccagcctc gcgctgaaag tgacatcgcc agcggcatgc ctaaccaccc
     3541 taacccgaca attgcgacct ttttcatccg ttatctcctg atacacctta gatctataag
     3601 gctacgctag cgtatcaaaa ctgacaattc attctatgaa tgaatctgtt caataatgat
     3661 aacgacatgc tgcaatgagc agtgaatcgt cggtaaccgc gtataccaga cggtgctcct
     3721 ctgtaatgcg tcgggaccag aaacctgaca aattatgttt caggggttct ggcttcccct
     3781 taccttcaaa tggcgttctg cgggtatctt tgataagttc attgatcttt ttaacaattc
     3841 gcttatctgt ttcctgccag tacagataat catcccatga ttcctcagac cagattagtt
     3901 tcactcaata atgtcctttt ctgttccttt gcctgatttc aggctatcga ttgagtccat
     3961 caatctccgg gcgttagcgg gggagcgcag tagataagcc gtctcttcca gcgagttgta
     4021 ttcttcgagt gacatcagaa cacaagcctc tccattctga cgagtaataa ggatcggggc
     4081 atgatcttca acggctttca tcattgttgc cgacaaattc tgacgcgctt cgctgtagct
     4141 aattgtacgc atgtcaatct cctcttttgt acagttcatt gtacaatgat gggcgttaat
     4201 taactattta ttaattagtt tgtagatcaa ggtattgtca gtgagacgaa aatccaggct
     4261 tcgctatttt tggtgccgtc agcttagagg acagtcctct tagcgccctc ctttccccgc
     4321 tcattcatta aacaaatcca ttgccataaa atatataaaa aagcccttgc tttctaacgt
     4381 gaaagtggtt taggttaaaa gacatcagtt gaataaacat tcacagagac ttttatgaca
     4441 cgcgttcaat ttaaacacca ccatcatcac catcatcctg actagtcttt caggcgatgt
     4501 gtgctggaag acattcagat cttccagtgg tgcatgaacg catgagaaag cccccggaag
     4561 atcaccttcc gggggctttt ttattgcgcg attgataacg gttcagacag gtttaaagag
     4621 gaataagaaa atgacagaca acactcgttt acgcatagct atgcagaaat ccggccgttt
     4681 aagtgatgac tcacgtgaat tgctggcgcg ctgtggcatt aaaatcaatc ttcacaccca
     4741 gcgcctgatc gcgatggcag aaaacatgcc gattgatatt ctgcgcgtgc gtgacgacga
     4801 cattcccggt ctggtaatgg acggcgtggt agaccttgga attatcggcg aaaacgtgct
     4861 ggaagaagaa ctgcttaacc gccgcgccca gggtgaagat ccgcgctact ttaccctgcg
     4921 tcgactggat ttcggcggct gccgactttc actggcaacg ccggttgatg aagcctggga
     4981 cggcccgctc tccttaaatg gtaaacgtat cgccacctct tatcctcacc tgctcaagcg
     5041 ttatctcgac cagaaaggca tctcttttaa atcctgctta ctgaacggtt ctgttgaagt
     5101 cgccccgcgt gccggactgg cggatgcgat ttgcgatctg gtttccaccg gtgccacgct
     5161 ggaagcaaac ggcctgcgtg aagtcgaagt tatctaccgc tcgaaagcct gcctgatcca
     5221 gcgcgatggc gaaatggaag aatccaaaca gcaactgatc gacaaactgc tgacccgtat
     5281 tcagggtgtg atccaggcgc gcgaatcaaa atacatcatg atgcacgcac cgaccgaacg
     5341 tctggatgaa gtcatcgccc tgctgccagg tgccgaacgc ccaaccattc tgccgctggc
     5401 gggtgaccaa caacgcgtag cgatgcacat ggtcagtagc gaaaccctgt tctgggaaac
     5461 gatggaaaaa ctgaaagcgc tgggtgccag ttcaatcctg gtcctgccga ttgagaagat
     5521 gatggagtga tcgccatgag ctttaacaca atcattgact ggaatagctg tactgcggag
     5581 caacaacgcc agctattaat gcgcccggcg atctccgctt ctgaaagcat tacccgcact
     5641 gttaacgata ttctcgataa cgtgaaagca cgcggcgatg aggccctgcg ggaatacagc
     5701 gcgaagtttg ataaaaccac ggttaccgcg ctgaaggtgt ctgcagagga aattgccgcc
     5761 gccagcgaac gcctgagcga cgagctaaaa caggcgatgg cggtggcagt aaagaatatt
     5821 gaaaccttcc acactgcgca aaaactgccg ccggtagatg tagaaactca gccaggcgta
     5881 cgttgtcagc aagtcacgcg cccggtggct tcggtaggtt tgtatattcc tggcggctcc
     5941 gccccgctct tctcaacggt attaatgttg gcaactccgg cgcgtattgc gggctgtaaa
     6001 aaagtggtgc tgtgctcacc gccgccgatt gccgatgaga tcctttatgc ggcgcagctg
     6061 tgcggtgtac aggacgtgtt taacgtcggc ggcgcacagg ccattgccgc actggcgttt
     6121 ggtactgaat ctgtgccaaa agtggacaaa atcttcgggc caggcaacgc ctttgtcacc
     6181 gaggcaaaac gccaggtaag ccagcgtctg gacggtgcgg cgatcgatat gcccgcaggc
     6241 ccgtcggaag tgctggtgat tgccgacagc ggcgctacgc cagatttcgt ggcttctgat
     6301 ttgctttctc aggctgaaca cggcccggac tctcaggtga ttttactgac gcccgatgct
     6361 gatatggcgc gtcgcgttgc cgaagctgtc gaacgccagc tggcagaact gccgcgtgcc
     6421 gaaaccgcac gtcaggcact gagcgccagc cgcctgatcg tgactaaaga tttagcgcag
     6481 tgcgtagaga tttccaacca gtacggcccg gagcacctga tcattcagac ccgcaacgcc
     6541 cgcgaactgg tcgatggcat caccagcgcc ggttcggtat ttcttggtga ctggtcaccg
     6601 gaatcggcag gcgactatgc ctccggcact aaccatgttc taccgactta cggttacacc
     6661 gccacctgtt ccagcctcgg gctggcagat ttccagaagc gcatgaccgt gcaggaactc
     6721 tcgaaagaag gcttttccgc gctggcttcg accattgaaa cactggcctc cgccgagcgc
     6781 ctgaccgccc ataaaaatgc cgttactttg cgtgttaacg cccttaagga gcaagcatga
     6841 gcaccgtgac tattaccgat ttagcgcgtg aaaacgtccg caacctgacg ccgtatcagt
     6901 cagcgcgtcg tctgggcggt aacggcgatg tctggctgaa cgccaacgaa taccccactg
     6961 ccgtggagtt tcagcttact cagcaaacgc tcaaccgcta cccggaatgc cagccgaaag
     7021 cggtgattga aaattacgcg caatatgcag gcgtaaaacc ggagcaggtg ctggtcagcc
     7081 gtggcgcgga cgaaggtatt gaactgctga ttcgcgcttt ttgcgaaccg ggtaaagacg
     7141 ccatcctcta ctgcccgcca acgtacggca tgtacagcgt cagcgccgaa acgattggcg
     7201 tcgagtgccg cacagtgccg acgctggaca actggcaact ggacttacag ggcatttccg
     7261 acaagctgga cggcgtaaaa gtggtctatg tttgcagccc caacaacccg accgggcaac
     7321 tgatcaaccc gcaggatttt cgcaccctgc tggagttaac gcgcggtaag gcgattgtgg
     7381 ttgccgatga agcctatata gagttttgtc cacaggcatc gctggctggc tggctggcgg
     7441 aatatccgca cctggctatt ttgcgcacac tgtcgaaagc ttttgctctg gcggggcttc
     7501 gttgcggatt tacgctggca aacgaagagg tcatcaacct gttaatgaaa gtgatcgccc
     7561 cctacccgct ctcgacgccg gttgccgaca ttgcggccca ggcgttaagc ccgcagggga
     7621 tcgtcgccat gcgtgagcgg gtggcgcaaa ttattgcaga acgcgaatat ctgattgccg
     7681 cattgaaaga gatcccctgc gtggagcagg tttttgactc tgaaaccaac tacattctgg
     7741 cgcgctttaa agcctccagt gcagtgttta aatctttgtg ggatcagggc attatcttac
     7801 gtgatcagaa taaacaaccc tctttaagcg gctgcctgcg aattaccgtc ggaacccgtg
     7861 aagaaagcca gcgcgtcatt gacgccttac gtgcggagca agtttgatga gtcagaagta
     7921 tctttttatc gatcgcgatg gaaccctgat tagcgaaccg ccgagtgatt ttcaggtgga
     7981 ccgttttgac aaactcgcct ttgaaccggg cgtgatcccg gagctgctga agttgcaaaa
     8041 agcgggctat aaactggtaa tgatcaccaa tcaggatggt ctgggaacac aaaatttccc
     8101 gcagacggat ttcgatggcc cgcacaacct gatgatgcag atcttcacct cgcaaggcgt
     8161 acagtttgat gaagtgctga tttgcccaca cctgcccgcc gatgagtgcg actgccgtaa
     8221 gccgaaagta aaactggtag agcgttatct ggctgagcaa gcgatggatc gcgccaacag
     8281 ttatgtgatt ggcgatcgcg cgaccgatat tcaactcgct gaaaacatgg gcattactgg
     8341 tttacgctat gaccgcgaaa ccctgaactg gccgatgatt ggtgagcagc tcactaaacg
     8401 agaccgttac gcccatgtag tgcgcaacac caaagagacg cagattgacg ttcaggtgtg
     8461 gctggatcgc gaaggtggca gcaagattaa caccggcgtt ggcttctttg atcatatgct
     8521 ggatcagatc gccacccacg gcggtttccg catggaaatc aacgtcaaag gcgacctcta
     8581 tatcgacgat caccacaccg tcgaagatac cggtctggcg ctgggcgaag cgttaaaaat
     8641 tgccctcggc gataaacgcg gtatttgtcg ctttggtttt gtgctaccga tggacgaatg
     8701 ccttgcccgc tgcgcgctgg atatctctgg tcgcccgcac ctggaatata aagccgagtt
     8761 tacctaccag cgcgtgggcg atctcagcac cgagatgatc gagcacttct tccgttcgct
     8821 ctcatacacc atgggcgtga cgctacacct gaaaaccaaa ggtaaaaacg atcatcaccg
     8881 tgtagagagt ctgttcaaag cctttggtcg caccctgcgc caggccatcc gcgtggaagg
     8941 cgacaccctg ccctcgtcga aaggagtgct gtaatgaacg tggtgatcct tgatactggc
     9001 tgcgccaatc tgaactcggt gaagtctgcc attgcgcgcc acggttatga acccaaagtc
     9061 agccgtgacc cggacgtagt gttgctggcc gataaactgt ttttacccgg cgttggcact
     9121 gcgcaagcgg cgatggatca ggtacgtgag cgcgagctgt ttgatctcat caaagcctgt
     9181 acccaaccgg tgctgggcat ctgcttaggg atgcaactgc tggggcggcg cagcgaagag
     9241 agcaacggcg tcgacttgct gggcatcatc gacgaagacg tgccgaaaat gaccgacttt
     9301 ggtctgccac tgccacatat gggctggaac cgcgtttacc cgcaggcagg caaccgcctg
     9361 tttcagggga ttgaagacgg cgcgtacttt tactttgttc acagctacgc aatgccggtc
     9421 aatccgtgga ccatcgccca gtgtaattac ggcgaaccgt tcaccgcggc ggtacaaaaa
     9481 gataacttct acggcgtgca gttccacccg gagcgttctg gtgccgctgg tgctaagttg
     9541 ctgaaaaact tcctggagat gtgatgatta ttccggcatt agatttaatc gacggcactg
     9601 tggtgcgtct ccatcagggc gattacggca aacagcgcga ttacggtaac gacccgctgc
     9661 cgcgattgca ggattacgcc gcgcagggtg ccgaagtgct gcacctggtg gatctgaccg
     9721 gggcaaaaga tccggctaaa cgtcaaatcc cgctgattaa aaccctggtc gcgggcgtta
     9781 acgttccggt gcaggttggc ggcggcgtgc gtagcgaaga agatgtggcg gcgttactgg
     9841 aagcgggcgt tgcgcgcgta gtggtcggct ccaccgcggt gaaatcacaa gatatggtga
     9901 aaggctggtt tgaacgcttc ggtgccgatg ccttagtgct ggcgctggat gtccgtattg
     9961 acgagcaagg caacaagcag gtggcagtca gcggctggca agagaactcg ggcgtttcac
    10021 tggaacaact ggtggaaacc tatctgcccg tcggcctgaa acatgtgctg tgtaccgata
    10081 tctcgcgcga cggcacgctg gcaggctcta acgtctcttt atatgaagaa gtgtgcgcca
    10141 gatatccgca ggtggcattt cagtcctccg gcggtattgg cgacattgat gatgtggcgg
    10201 ccctgcgtgg cactggtgtg cgcggcgtaa tagttggtcg ggcattactg gaaggtaaat
    10261 tcaccgtgaa ggaggccatc gcatgctggc aaaacgcata atcccatgtc tcgacgttcg
    10321 tgatggtcag gtggtgaaag gcgtacagtt tcgcaaccat gaaatcattg gcgatatcgt
    10381 gccgctggca aaacgctacg ctgaagaagg cgctgacgaa ctggtgttct acgatatcac
    10441 cgcttccagc gatggccgtg tggtagataa aagctgggta tctcgcgtgg cggaagtgat
    10501 cgacattccg ttctgtgtgg cgggtgggat taaatcgctg gatgacgccg ccaaaattct
    10561 ttcctttggc gcggataaaa tctccattaa ctcccctgca ctggcggacc cgacgttaat
    10621 tactcgcctg gcggatcgct ttggcgtgca gtgtattgtg gtcggtattg atacctggta
    10681 cgacggcgaa accggtaaat atcatgtgaa tcaatatacc ggcgacgaaa gccgcacccg
    10741 cgtcactcag tgggaaacgc tcgactgggt acaggaagtg caaaaacgcg gtgccggaga
    10801 aatcgtcctc aacatgatga atcaggacgg cgtgcgtaac ggttacgacc tcgaacaact
    10861 gaaaaaagtg cgtgaagttt gccacgtccc gctaattgcc tccggtggcg cgggcaccat
    10921 ggaacacttc ctcgaagctt tccgcgatgc cgacgttgac ggtgcgctgg cagcttccgt
    10981 attccacaaa caaataatca atattggtga attaaaagcg tacctggcaa cacagggcgt
    11041 ggagatcagg atatgttaac agaacaacaa cgccgcgaac tggactggga aaaaaccgac
    11101 ggacttatgc cggtgattgt gcaacacgcg gtatccggcg aagtgttaat gctgggctat
    11161 atgaacccgg aagccttaga caaaaccatc gaaagcggca aagtcacttt cttctcgcgc
    11221 actaaacagc gactgtggac caaaggcgaa acgtcgggca atttcctcaa cgtagtaaat
    11281 attgcgccgg actgcgacaa cgacacgcta ctggtactgg cgaatcctat cggaccaacc
    11341 tgccataaag gcaccagcag ctgcttcggc gaaactgctc accagtggct gtttctgtat
    11401 caactggaac aactgctcgc cgaacgcaaa tcagccgacc cggaaacctc ctacaccgcc
    11461 aaactgtatg ccagcggcac caaacgcatt gcgcagaaag tgggtgaaga aggggtggaa
    11521 accgcactgg cagcgacagt acatgaccgc tttgaactga ccaacgaggc atctgatttg
    11581 atgtatcacc tgctggtgtt gttgcaggat caagggctgg atctcggaga agtgattgat
    11641 aatctgaaga atcggcatta acgcgttggc ccccgcagca acggcggggg tagcatctct
    11701 caggatttgc tttccagcaa tgtagtgtag agattgacat aggcgtcaat catatggtcg
    11761 gcagtaaaca tctcttcaaa acgacgacgc gagttttcgc catagcggtt ggaggtttcc
    11821 tcgttattcc agagctcatt catcgcctcc accagcgcct ggctatcatt cggcggaatc
    11881 acgcaaccac tcactttgtc ctggttaatg aaagaggtac ctgtaccaat ctcacaagag
    11941 atcagtggcc ttgcgaagcg tgcgccttcc aataacgtaa taccaaacgc ctcagagcgc
    12001 agatgcgagg ggaataccac gccccggcag agctggaaga gaatgtactt atcttcgtcg
    12061 ttgagcatgc cggtaaacat cacattgctc agcccgcgct gctgcgcttc acgccgcact
    12121 tccgattcca gcggcccgcc ccctacaacc accactggca gtcggctacg ctcagcggca
    12181 tccatcagaa tatgcagccc tttgtagtag cggaaagtgc cgacgaagag aaagaactta
    12241 tcgccgacag tttcccgcca gtgcgcgacc ctctgcggat cgtgctgcac gtcctgctgt
    12301 tccagaccaa acgggatcac caccgtttta tccagatatt ttttcagggt ctggctggaa
    12361 gccacataat tgggcgacga ggcaacgatg caatctacgc cgctgagaaa tcgctcctgc
    12421 agcggctggt acagcttcat taaccgtttt tgtttcacta tatcagagtg ataggtcacc
    12481 acagtcctgg cgtcaggccg cgccgaaaga tgcagcatat ccataaaggg aaacggaaaa
    12541 tggtagttga tgatatcgta gtcatcttta atcagcttaa aacgctttaa cgctttcagc
    12601 gaaaacggcg tggaggcaat ttcaaaaagc tgtttattat aaatgacccg atgatcttcg
    12661 taagcgacag gacctgtatc tttgtccggg ctaaaagtga aaacatcggc tgcgattccc
    12721 cggcgggcgc agccctgact tagctgataa attacctgct caataccgcc gtaggtatcg
    12781 ggatagtaag tcttatagac gtgtagaact ctcaactgac acccttagag taatttatag
    12841 gcgttaatgg tctgtgtcgc acagttctcc cacgaaaact gtttcgcctg agcaagaccg
    12901 cgcgcggtgg cgatttcccg ccagctatca tcttgcaggc tctgcaaaat ttgcgcgcta
    12961 atcgcgtcta tatcattagg atcggcaacg aggccggcat cgccaacaac ctcaggcaaa
    13021 gaggtgacat tggagcatac taccggcaca ccgcaagaca tcgcttcaag aataggtaaa
    13081 ccgaatccct cgtagaagga gggataaaca aagactctgg ccgctgcgta cagatacggc
    13141 aggtcttcat ccggaacata tccgaggtaa cggatccagc cttcccgagt accgagctcg
    13201 actaactgcc acagcacatc gtcttcccag ccgcgatagc cgctaaggat tagcggatag
    13261 cgcatgcgga tctccatcgg tagcagctga taggcatgca gcaggcctcg gatattttta
    13321 cgtggctcca tagtgccgat atatagcgcg taggcctgcc acgccagctg atatttctgc
    13381 agtaccggca gacactctgc cgggctgcgt gggatatagt cactgctgca ggctagcttg
    13441 gtggttacga tccgctcctc cggatagttg aacaagcgga taatttcact gcgcgagaaa
    13501 tcagaaacgg tcaggatcag ctttgccgaa tccagactct catgcaggga cttctccata
    13561 tagcgaaccc gatcttttgg atgatattcc gggcaggtaa aaatggatat gtcatgaaac
    13621 gtggtcacgg cgcgttccag tttatgcggc agataaaaat tggggccatg gtagatataa
    13681 tccttatagt cgcgcaatgc ccacgcctgg cgccgcggat gcagcaagcg ataagcctca
    13741 atcaa
//
LOCUS       DAPGWB010000117        13367 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.118, whole genome shotgun sequence.
ACCESSION   DAPGWB010000117 DAPGWB010000000
VERSION     DAPGWB010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13367
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.118"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            29..817
                     /locus_tag="RHX79_003347"
     CDS             29..817
                     /locus_tag="RHX79_003347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001707419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HDV2198483.1"
                     /translation="MNNHFLHHPKVDNELTRKYERARLDTENIYLLPLTRGNNHNYDG
                     KSVVEIRKLDISKESWPFNYVTETCRESDGITTTGRMLYRNLRITSALDEIYGGICKK
                     AHAATELAEGLRLNLFMKSPSYPVEDYTVHEITLGLGCNVPGYAGTTIGYISTLPASQ
                     AKRWTNEQPRIDIYIDQIMTVTGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAE
                     IHAKMGYNVIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK"
     gene            complement(958..1731)
                     /gene="uxuR"
                     /locus_tag="RHX79_003348"
     CDS             complement(958..1731)
                     /gene="uxuR"
                     /locus_tag="RHX79_003348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uxu operon transcriptional regulator"
                     /protein_id="HDV2198484.1"
                     /translation="MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLD
                     VTRTVVREALIMLEIKGLVEVRRGAGIYVLDNSGSQNTDSPDANVCNDAGPFELLQAR
                     QLLESNIAEFAALQATREDIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATH
                     NSMLVELFRQSWQWRENNPMWIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKL
                     AMWQHLENVKQRLLEFSNVDDIYFDGYLFDSWPLDKVDA"
     gene            complement(1946..3406)
                     /locus_tag="RHX79_003349"
     CDS             complement(1946..3406)
                     /locus_tag="RHX79_003349"
                     /EC_number="1.1.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructuronate reductase"
                     /protein_id="HDV2198485.1"
                     /translation="MTTIVDSNLPVARPSWDHSRLESRIVHLGCGAFHRAHQALYTHH
                     LLESTDSDWGICEVNLMPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALH
                     PEIDGCEGILNAMARPQTAIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKS
                     AIGYIVEALRLRREKGLKAFTVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENV
                     TFPCTMVDRIVPAATPETLQEIADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKV
                     GAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTMTNPAYRKAAFALMMQE
                     QAPTLSMPEGTDLNAYATLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQN
                     GGSWRHLALGVAGWMRYTQGVDEQGNAIDVVDPMLAEFQKINAQYQGADRVKALLGLS
                     GIFADDLPQNADFVGAVTAAYQQLCERGARECVAAL"
     gene            complement(3487..4671)
                     /gene="uxuA"
                     /locus_tag="RHX79_003350"
     CDS             complement(3487..4671)
                     /gene="uxuA"
                     /locus_tag="RHX79_003350"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709912.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HDV2198486.1"
                     /translation="MEQTWRWYGPNDPVSLADVRQAGATGVVTALHHIPNGEVWSVEE
                     ILKRKAIVEDAGLVWSVVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCY
                     NFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAV
                     RFATMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKA
                     IIPVAEEVGVRMAVHPDDPPRPILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYG
                     VRADNDLVDMIKQFGPRIYFTHLRSTMREDNPKTFHEAAHLNGDVDMYEVVKAIVEEE
                     HRRKAEGKEDLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIQRAFF
                     SR"
     gene            5011..6354
                     /gene="gntP"
                     /locus_tag="RHX79_003351"
     CDS             5011..6354
                     /gene="gntP"
                     /locus_tag="RHX79_003351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate permease GntP"
                     /protein_id="HDV2198487.1"
                     /translation="MHVLNILWVVFGIGLMLVLNLKFKINSMVALLVAALSVGMLAGM
                     DLMSLLHTMKAGFGNTLGELAIIVVFGAVIGKLMVDSGAAHQIAHTLLARLGLRYVQL
                     SVIIIGLIFGLAMFYEVAFIMLAPLVIVIAAEAKIPFLKLAIPAVAAATTAHSLFPPQ
                     PGPVALVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVD
                     MNNLPSFGVSILVPLIPAIIMISTTIANIWLVKDTPAWEVVNFIGSSPIAMFIAMVVA
                     FVLFGTARGHDMQWVMNAFESAVKSIAMVILIIGAGGVLKQTIIDTGIGDTIGMLMSH
                     GNISPYIMAWLITVLIRLATGQGVVSAMTAAGIISAAILDPATGQLVGVNPALLVLAT
                     AAGSNTLTHINDASFWLFKGYFDLSVKDTLKTWGLLELVNSVVGLIIVLIISMVA"
     gene            complement(6597..7499)
                     /gene="fimH"
                     /locus_tag="RHX79_003352"
     CDS             complement(6597..7499)
                     /gene="fimH"
                     /locus_tag="RHX79_003352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria D-mannose specific adhesin FimH"
                     /protein_id="HDV2198488.1"
                     /translation="MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVN
                     LAPAVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSS
                     YPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNS
                     DDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYL
                     SGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTAN
                     YARTGGQVTAGNVQSIIGVTFVYQ"
     gene            complement(7519..8022)
                     /gene="fimG"
                     /locus_tag="RHX79_003353"
     CDS             complement(7519..8022)
                     /gene="fimG"
                     /locus_tag="RHX79_003353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimG"
                     /protein_id="HDV2198489.1"
                     /translation="MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTT
                     NATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGVADSTGYYKNQG
                     TAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI
                     SITYTYS"
     gene            complement(8035..8565)
                     /gene="fimF"
                     /locus_tag="RHX79_003354"
     CDS             complement(8035..8565)
                     /gene="fimF"
                     /locus_tag="RHX79_003354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709916.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimF"
                     /protein_id="HDV2198490.1"
                     /translation="MRNKPFYLLCAFLWLAVSRVLAADSTITIRGYVRDNGCSVAAES
                     TNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLA
                     LENTVSAASGLGIQLLNEQQNQIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPV
                     TAGHINATATFTLEYQ"
     gene            complement(8575..11211)
                     /gene="fimD"
                     /locus_tag="RHX79_003355"
     CDS             complement(8575..11211)
                     /gene="fimD"
                     /locus_tag="RHX79_003355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher FimD"
                     /protein_id="HDV2198491.1"
                     /translation="MSYLNLRLYQRNTQCLHIRKHRLAGFFVRLFVACAFAAQTPLSS
                     AELYFNPRFLADDPQAVADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSE
                     QGIVPCLTRAQLASMGLNTASVSGMNLLADDACVPLTSIIHDATAHLDVGQQRLNLTI
                     PQAFMSNRARGYIPPELWDPGINAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIG
                     AWRLRDNTSWSYNSSDRSSGSKNKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGI
                     NFRGAQLASDDNMLPDSQRGFAPVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTIND
                     IYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEK
                     PRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPD
                     DSQHDGQSVRFLYNKSLNESGTNIQLVGYRYSTSGYFNFADTTYSRMNGYNIETQDGV
                     IQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGL
                     NTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWRHASASYSMS
                     HDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANI
                     GYSHSDDIKQLYYGVSGGVLAHANGVTLGQPLNDTVVLVKAPGAKDAKVENQTGVRTD
                     WRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVPTRGAIVRAEFKARVGIKL
                     LMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLAGKVQVKWGEEENAHCI
                     ANYQLPPESQQQLLTQLSAECR"
     gene            complement(11278..12003)
                     /gene="fimC"
                     /locus_tag="RHX79_003356"
     CDS             complement(11278..12003)
                     /gene="fimC"
                     /locus_tag="RHX79_003356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313302.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria chaperone FimC"
                     /protein_id="HDV2198492.1"
                     /translation="MSNKNVNVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATR
                     VIYPAGQKQVQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLR
                     ILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPP
                     DQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGARVLENALVPPMGESTVKLPSDAG
                     SNITYRTINDYGALTPKMTGVME"
     gene            complement(12040..12579)
                     /locus_tag="RHX79_003357"
     CDS             complement(12040..12579)
                     /locus_tag="RHX79_003357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDV2198493.1"
                     /translation="MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCR
                     IEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGK
                     NPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATG
                     RRVTGGIANAQAWFSLTYQ"
     gene            complement(12644..13192)
                     /gene="fimA"
                     /locus_tag="RHX79_003358"
     CDS             complement(12644..13192)
                     /gene="fimA"
                     /locus_tag="RHX79_003358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial major subunit FimA"
                     /protein_id="HDV2198494.1"
                     /translation="MKIKTLAIVVLSALSLSSAAALADTTTVNGGTVHFKGEVVNAAC
                     AVDAGSVDQTVQLGQVRTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAID
                     ATHTDVLALQSSAAGSATNVGVQILDRTGAALALDGATFSSETTLNNGTNTIPFQARY
                     FATGAATPGAANADATFKVQYQ"
BASE COUNT         3240 a         3471 c         3247 g         3409 t
ORIGIN      
        1 aagcaatgcc gctaataacc aattctatat aaataatcac ttccttcatc atccaaaagt
       61 cgacaatgag ttaacacgta aatatgaacg tgcacgcctg gatacggaaa atatctatct
      121 tctgcctctt actcgtggca ataaccataa ttacgatgga aaaagcgttg tcgaaattag
      181 aaaacttgat attagtaaag agtcctggcc atttaattat gtgacagaaa catgcagaga
      241 atccgatggt attacaacaa caggtcgtat gctctatcga aacttgcgaa ttacctcagc
      301 tttagacgaa atatatggtg gtatatgtaa aaaggcgcat gctgccacag agttagcaga
      361 aggattacgg ctaaatttat ttatgaagag cccttcctat cctgttgagg actatacagt
      421 tcatgaaata acattaggcc ttggttgcaa tgttccaggt tatgccggaa ccacgatagg
      481 atatatttca acccttccag cttctcaggc aaaaagatgg accaatgagc agccaaggat
      541 tgatatctat attgatcaga taatgacggt aacaggggta gcaaattctt ccggattcgc
      601 ccttgccgca ttacttaatg ctaatattgg aatgggaaat gacccaataa ttggtataga
      661 agcctatccc ggtaccgcgg agatccatgc aaaaatggga tataacgtta tccccggtga
      721 tgaagatgcg ccactcaaac gcatgactct gcaaccgtca tctcttccag aactgtttga
      781 attaaaaaat ggtgaatgga attatattgg taaatagcca ctgagaagaa tgagtactaa
      841 tattcaggtt atacagatat ttaaacaata ccctgcaatt tacaaagtaa tactcattgc
      901 gacttcttaa tttaagaaag cgcaaggaac gtttaccctt gcgcttatta taataagtca
      961 ggcgtcgact ttatccagcg gccatgaatc aaacagatag ccgtcaaaat aaatatcgtc
     1021 aacgttcgag aattccagca gacgttgctt aacgttttcc agatgctgcc acattgccag
     1081 cttcgccgct cgggcatctt ttttgattaa cgcggcgagg atctgtttgt gatcgcccaa
     1141 ccactctttg cgatacaggc tgtcatccag atggctgtgc aactggatcc acattgggtt
     1201 gttttcccgc cactgccagg actgacggaa cagctccacc agcatgctgt tatgcgttgc
     1261 ttcggcaatg gcgagatgga actgcatatc accgctttcg ctgctgcctg gcgcactgga
     1321 agccagttca cgctcttcca gttgcaatgc ctgacgcatt ttgacgatat cttcgcgggt
     1381 agcctgcaaa gcggcaaact cggcgatgtt gctctccaat aactgccgcg cctgtaacag
     1441 ctcaaaagga ccggcatcgt tgcagacgtt ggcatccgga ctgtctgtgt tctggctgcc
     1501 tgagttatca agaacataga taccggcacc ccggcgtact tccaccagcc ctttgatctc
     1561 cagcatgatc agcgcttcac gtaccaccgt ccgcgtgaca tcaagcattt ctgcaatttc
     1621 acgctccggc ggcagccgtt cgccagggtt gtacggcgtc tttatgatca gatcgcggat
     1681 catcgccccg acttcctggt aaggtctttg cgcagaggtg gcagatttca tggtgttgtg
     1741 tccgttaggt gcggttaatc aaatttttgc cggatgcggc gtgaacgcct tatccggcct
     1801 acaacgggca attttacggc ccccgttaat ctcaaactat accattagca ctggaagttg
     1861 gcacgtacag gtgggcaaaa aaacgaaaac tggtcaacca aatatcagtt tgattgacca
     1921 gtaagtctgt agggtaatca gttagttaca gcgcagccac acactcgcgc gcaccgcgtt
     1981 cgcacagctg ctgatatgcc gccgtcactg cgccaacaaa gtcggcattc tgcggcagat
     2041 catcggcaaa aataccgctc aggcccagca gcgctttcac gcggtctgcg ccctgatact
     2101 gcgcgttgat cttctggaac tccgccagca tcgggtcgac cacgtcaatg gcattaccct
     2161 gctcatccac gccctgggtg taacgcatcc agccagccac gcccagcgcc aggtgacgcc
     2221 agctgccgcc gttttgcagg tgcagacgca ccgggtccag cagacgctgc ggtaacttct
     2281 ggctgccgtc catcgcaatc tgccaggtac ggtgacgcag agacgggttg ctgaaacgct
     2341 cgatcagcag cgtcgcatag gcgttcaggt ctgtaccttc cggcatcgac agcgttggcg
     2401 cttgttcctg catcatcagg gcaaaggccg ctttgcgata agccgggtta gtcatggtgt
     2461 cggcaatggt ttcatagccg ccgaggtaac cgaggtacgc cagaaaagag tggctgccgt
     2521 tcagcatacg cagcttcatc atttcgaacg gcacaacgtc tgcaacgaac tgtgcgccca
     2581 ctttatccca gtccgggcga ccattaacga agttatcttc aatcacccac tgacggaacg
     2641 gttcgcaggc aatggcgcac gggtcgtaaa cacccagctg gtcagcaatt tcctgtaagg
     2701 tttctggcgt cgccgccgga acgatgcggt caaccatggt gcacgggaag gtgacatttt
     2761 cttcaatcca tgccgccagc tgcgggtcac gcgcctgagc cagccccagt accgcgacct
     2821 tcgccacatg accgttttca cgcacgttat cgcaggacat caccgtaaac gctttcaacc
     2881 ctttttcacg acgcagacgc aaggcttcga cgatgtaacc aatcgcggac ttcggcgcag
     2941 tcgggttttc cagatcgtgc ttgatcagcg ggttattgag atccagctgg ccgctcgccg
     3001 catcggcgca gtaacctttt tccgtgaccg tcagggagac aatcgccgtt tgcggacgcg
     3061 ccatcgcgtt gagaatacct tcgcagccgt cgatttccgg atgcagcgct tctttcatcg
     3121 aaccgataat tttcagctcg gtgctttctg cgcctttttc cgctacggtg tacagcagtt
     3181 gctgtttttt caggttttcg atcagcacgc ggtcgttgcc tggcatcagg ttaacttcgc
     3241 agatgcccca gtcgctgtcg gtgctttcca gcagatgatg ggtatacagc gcctggtgcg
     3301 cgcggtgaaa cgccccgcaa ccgagatgca caatgcgtga ttccagacga gaatgatccc
     3361 atgacgggcg ggcaaccggc agattgctgt caacaatagt agtcatcgta aactccagaa
     3421 tccgtcttca gagagtgacg gcaaggaaga aggaaccggc acggcgcgca gccatgccgg
     3481 tggatattaa cggctaaaga aagcgcgctg gatcgccagt tcgacaccgc gaacttcggc
     3541 caggcctttc agacgaccaa ttgcggagta acctgggttg gttttcttct tcaggtcgtc
     3601 cagcatctga tgaccgtggt ccggacgcat cgggatcagg tcttctttgc cttccgcttt
     3661 acgacggtgt tcttcttcaa caatcgcttt caccacttcg tacatatcaa cgtcaccgtt
     3721 caggtgcgcc gcttcgtgga aggttttcgg gttatcttca cgcatggtgg agcgcagatg
     3781 ggtgaagtaa atacgcggac cgaactgctt gatcatatca accagatcgt tgtcagcacg
     3841 cacgccgtag gaaccggtgc acatggtgaa accgttcgcc atgctgttta cggtatcaac
     3901 catccactgc atatcttcaa tggtggaaac aatgcgcggc aggccgagga tcgggcgcgg
     3961 cggatcgtcc gggtgaacag ccatacgcac gccaacttct tcggcaaccg gaataatcgc
     4021 tttcaggaag acggcaaagt tttcgcgcag tttagctttg tcgatatctt tgtaaagctc
     4081 caggtgctta cggaactggt cgagggtata cccttcttcc gcgcccggca gaccggcaat
     4141 gatgttacgc gtcagacgcg ctttgtcttc gtcgctcata gtggcgaagc gaacagcagc
     4201 ctgagcaatt tcttcttcgg tgtaatccgc ttccgcgcct ggacgtttca ggatatgcat
     4261 ttcgaatgca gcgaattcga tctggtcgaa gcgcagagct ttggagccgt ctggcagcac
     4321 gtattcgagg tcagtacggg tccagtcgag caccggcatg aagttgtagc acacggtgcg
     4381 aatgccgcac tgcgccaggt tgcgcagagt ctgctgatag ttagcgatcc actgctcata
     4441 gttgccagtg tgggttttga tatcttcgtg aattggtacg ctttctacga cagaccacac
     4501 caggcctgcg tcttcaacga tcgccttgcg tttgaggatc tcttctacgg accatacttc
     4561 gccgttcggg atatggtgca gcgcggtaac cacgccagtt gcgcccgcct gacggacatc
     4621 agctaaagaa accggatcgt ttgggccgta ccagcgccag gtctgttcca tgatttttcc
     4681 tctttcacat agtgggttcc acagcaaaga gacgcggaac cctggagttg tttaggtatc
     4741 cggatgaaca accagaccgc agccgtggcg ttgcatcgga tgagatggcg tataagttct
     4801 accttttggt aagacatgtc aacccgaatt ctgaaattgg ttaaccacat cacaagaatt
     4861 tcactctcat ggttgttgct gcaaattgca gcaaagggta atcgatggtt attgatcaga
     4921 ggatgtgaca ttcatcgcaa caatggttga ccaatttgca taacatgtcg cccaaaataa
     4981 caacggttca accaggtaag gtaaaacgtt atgcatgtgc ttaacattct ctgggtagta
     5041 ttcggtatcg gcctgatgct ggtactgaat ttgaagttca aaatcaattc aatggtggct
     5101 ttgttggtgg cggcgctgtc cgtcgggatg ctggcgggca tggatttgat gtcgctgctg
     5161 cacactatga aagcgggctt cggcaacacg ctgggggaac tggctatcat cgtggtgttc
     5221 ggtgcggtca tcggtaaatt gatggtcgac tccggcgcgg ctcaccagat agcgcatacg
     5281 ctgctggcgc gtctcggtct gcgctatgta cagctgtcgg tgattatcat cggcttgatt
     5341 ttcggtctgg cgatgttcta tgaagtggcc tttatcatgt tagcgccgct ggttattgtt
     5401 attgccgccg aagctaaaat tccgttcctg aaactggcga tcccggcagt agcagctgcc
     5461 actaccgcac attcactgtt cccaccgcag ccgggtccgg tggcgctggt gaatgcttat
     5521 ggcgcggata tggggatggt ttatatctat ggcgtactgg tgacgatccc aagtgtaatc
     5581 tgcgcaggtc tgatcctgcc gaagttcctc ggcaatcttg agcgcccaac gccatcattc
     5641 ctgaaagcag atcaaccggt agatatgaat aatctgccct ctttcggcgt ttcgattctg
     5701 gtgccgctga tcccggcgat cattatgatc tctaccacca tcgccaatat ctggctggta
     5761 aaagataccc ctgcctggga agtggttaac tttatcggtt cctcgccgat tgcaatgttt
     5821 attgcgatgg tggttgcatt cgtactcttt ggcaccgcac gtggtcatga catgcagtgg
     5881 gtgatgaacg cttttgaaag cgcggtgaag agtattgcaa tggtgattct gatcatcggt
     5941 gcgggtggcg tgctgaagca gactatcatc gacaccggca ttggcgacac catcggcatg
     6001 ttgatgtccc acggcaatat ctcgccctac atcatggcat ggctgatcac tgtgctaatt
     6061 cgtctggcga cgggtcaggg tgtcgtttcg gcgatgaccg ccgccgggat tataagtgct
     6121 gcaatcctag atccagcaac tggtcagctg gttggcgtga atccggcgct gctggtactg
     6181 gcgacggctg cgggttccaa caccctcacc cacattaacg atgcatcttt ctggttgttc
     6241 aaaggttact ttgacctgtc agtaaaagac acgttgaaaa cctggggtct gctggagctg
     6301 gtcaactccg tggttgggct gattattgtg ctgattatta gcatggtagc gtaaaaggac
     6361 accagagcct gccaatggca ggctctgact gatgacaaag tctaaaaatg tgcccagaca
     6421 gtcctctcgc ccctctgggg agagggttag ggtgagggga aaagaccagc aaagtgcgct
     6481 ttgtttatgc cagatgcgac gctaacgcgt cttatctggc ctacaaaggg ctaacgtgca
     6541 ggtttttagc ttcaggtaat attgcgtacc tgcattagca atgccctgtg atttctttat
     6601 tgataaacaa aagtcacgcc aataatcgat tgcacattcc ctgcagtcac ctgccctccg
     6661 gtacgtgcgt aatttgccgt taatcccaga cttaccgccg aagtccctac tgctcctaac
     6721 gataccgtgt tattcgctgg aataatcgta ccgttgcgcg tcaactgtac gccgacgccc
     6781 tgcgctggtg aaaacgacgc ggtattggtg aaaatcgagt tgcccgcatc tgcggttgtg
     6841 ccggagaggt aataccccag gttttggctt ttcgcacaat aaacggtaag aggaattggc
     6901 actgaaccag ggtagtccgg cagagtaacg gtgacatcac gagcagaaac atcgcagccg
     6961 ccagtaggca ccaccacatc attattggcg taaatattcc acacaaactg gaaatcatcg
     7021 ctgttatagt tgttggtctg tcgcaaaata agcacggcaa ttaatgagcc agctttaatc
     7081 gccaccccgc ccgcactgct cacaggcgtc aaataaagcg ccaccggcca cggcttatcc
     7141 gttctcgaat tataaacaac ccgcggcgtt tcgctggtgg tcggaaatgg atagctactg
     7201 ccactatatt ttacggtccc ggaaaaatta gataacacgc cgccataagc cgagcctcgt
     7261 tgcagtgtga catagtctgt aatggtttcc ggataatcgt tatggcaaaa gatttgcgtc
     7321 gaaagatcta cgaccaggtt ttgccccaca ttcacggcag gcgcaaggtt tacataaaca
     7381 ttagcgctgc caccgccaat agggatagct gtaccattgg cggttttaca ggcgaatgac
     7441 caggcattta ccgaccagcc catcagcagt acagcaaaca gggtaataac tcgtttcatt
     7501 acaatcatct cttcgggttc agctgtaggt ataggtgatg ctaatcactg cctgaatggt
     7561 tccctgagtg gctccgccat ttactgtcaa tgctctgacc tgtaacggga agtgcgctga
     7621 ttgtgaggaa tcatccacct gaactgtttt ggttgcgcca gtattcaatg tgttgccact
     7681 gtcatcctgt agctctaact ggatgttttg cgcggtcccc tggtttttat aatatccggt
     7741 actgtcggct accccgctga agctggcagt gaccctcgac gttcccaccg gacaattagt
     7801 caactcaagc gcaacatcat gccaggccga tgccgccccg gcagacatca gactgaaaga
     7861 ataaagatcg ccgagatcaa ccgtggcatt ggtggtggaa accgtgcacg gtttggcgac
     7921 gaccttaccg ttcaccgtga tggtgacatc ggctgcctgt atcgtcgcac ttgcgagcgc
     7981 caatattgcc gccaataaat acccacgttt gcgccatttc atgagcatct ccagttactg
     8041 atattcaaga gtgaaggtag ccgtggcatt gatatgcccc gcagtgacag gcacctgtgt
     8101 cgccattagc cgggcgtaaa aattcaacgt atttggttta cccggcgtca gggtcgtcca
     8161 cgaaatcgcg gacgatggag cattaagggg tatctgattt tgctgctcat tcagaagctg
     8221 tattcccagt cccgaagccg ctgataccgt attttcaagt gcaagcaggt tggcattgtg
     8281 gctatctgca acgccggtaa acccaacctt tacggcagaa acggcgttac cacagggtga
     8341 cagcaaaata cgaaatggaa cgacaggagt cgttgcgcca atgttgttaa attgcttcgc
     8401 cgcgttttcc atcagatcaa cagtaaaatt ggttgattca gcggccacac tacagccgtt
     8461 atctctgaca tagccgcgga tagtaatcgt gctatccgca gccaaaacgc gacttaccgc
     8521 cagccacaaa aaagcgcaca gaagataaaa aggtttgttt ctcatcacgc ccccttaacg
     8581 acattcagct gatagctggg ttaataactg ctgctgactc tctggtggca gttgataatt
     8641 ggcgatacag tgagcatttt cctcttctcc ccatttcacc tgaacttttc ccgctaaagg
     8701 cattccgctg aggtaaacct gaccattatc cgcaacaatg ccgctactct ggctactctc
     8761 tgatgtcacc atcgccccaa acggcagcgg cttattattg tgggttagcg tcatgagcag
     8821 ttttatccca acgcgcgctt taaactctgc tcgcacgatc gccccacgag tgggaacaac
     8881 gttagcgacc gcgttatcta aatcgacgtt atcagccagg gtattggtat ccagcgccac
     8941 tctattttcc cgatattcag tggcataagg cagcacggca taaccacgcc agtcggtacg
     9001 cacccccgtc tggttttcga cttttgcatc ttttgcgcca ggcgctttaa caagcaccac
     9061 cgtatcgttt aacggctgcc ccagcgttac accattggca tgagccagta ccccaccgct
     9121 gactccgtaa tagagctgct taatatcatc gctatggctg taaccgatat tggcattgcc
     9181 gtaaccaccg cgataattca gcgtggcgta gcctgtactt ccgctattac catcacctcc
     9241 cccggcatag ccggtttgca cgctatagct gaggttgttg tcttccagca acgtaccgta
     9301 tacaccagcc agattggtca tccgaccgtt gagatcgtgt gacatgctgt agctggcact
     9361 ggcatgtcgc cactgagatt tactgtcaga acgcagccag tggctgaaag gaatattgac
     9421 gttaagcgct aacatctgat cccgtccttt ttgccaggcg tttttcgtca ggctatagct
     9481 gagcgtccag ttgatatctt cgaacgcagt atttaatcca gcctggaatt gctcatcgac
     9541 attactcgtt ccccaataag tttgatggct accactcaaa tacagtgttg atgtgcgccc
     9601 gagttgctga gtaacggtga gctgtaattt cccgcgtttg ttataagcga ggttgtaata
     9661 gtcggtgaat ttcggcttaa cctgaatcac tccatcctgt gtttcgatgt tgtagccatt
     9721 cattcgactg tatgttgtat cagcgaaatt aaaatatccg ctggtcgaat aacggtaacc
     9781 cactaactga atattcgtgc ctgactcatt gagcgatttg ttatagagaa aacgcaccga
     9841 ttgtccgtca tgctgactgt catcgggaag tgtggaatta gcctgagtca tatccacaga
     9901 cagagcgccc agtgccccca tgtttttccc gataccgaaa ttaaaagcac gataacgatc
     9961 cgccagttgc gttccaccat atattgtcca gccagccgga aggccgtgga gtaatgtact
    10021 ctggaaaaag cggggttttt cctgctgcgc atttccacta cggtattctc ctgccgtaat
    10081 ggaataacga gtatgccctt cacgttgcaa aagcgggact gacgaatagg gtacggtaaa
    10141 aatctgcgtg ctgccgtcag cctctttgat cgttacctgc aagtcaccac tattacctgc
    10201 ggcatagata tcgttgatgg taaaaggccc cggtggcacc gtactattat aaatgtcata
    10261 cccattttgt ttaatagtga cctgtgcagt accacgagca ataccgtgga tcaccggggc
    10321 aaatcctctt tggctatcgg gtaacatatt gtcatctgag gccaattgtg cgccgcgaaa
    10381 gttaatacca tcgaaaatat cgccctgagt ataaccatca cccagcgtca gccgggaacg
    10441 taacggtatt atgtctcgct caagccaggt attgatatgc tgccatttat ttttgctacc
    10501 tgatgatctg tcgctactgt tataactcca gctggtattg tcgcgtaaac gccacgcacc
    10561 aatatttaac ccactctgta ggtttaaata tgcataatgg ctgttacccc caatccgatt
    10621 ctgtacacta tttccgctga aattataatt gagcaatccg gcattaatac cgggatccca
    10681 taactcagga ggaatataac cacgcgcgcg attactcata aatgcctgag ggatcgtcag
    10741 gttgagtcgc tgctgaccaa catctaaatg cgcagtagcg tcatggatta ttgaggttaa
    10801 tggcacgcag gcatcatccg ccagcagatt cataccggag acagaagccg tattcagccc
    10861 catactggca agttgcgcgc gtgtcaggca gggaacaatc ccttgttcgc tgtcgcccgt
    10921 attaaatgtg acatcacgcg ttgccatata accattattc aaatagatat cgacacgata
    10981 cgtccctggc ggtaattctt gcccattttc aaaacgcgat aaatcagcca cagcctgggg
    11041 atcatccgct aaaaagcgcg gattaaaata gagttcggca gatgacaaag gtgtctgtgc
    11101 ggcaaaagca caggcgacaa agagccggac aaaaaaacca gccaaacgat gcttacgaat
    11161 atgcaagcat tgtgtgtttc gctggtaaag tcttaaattc agatatgaca ttattcctcc
    11221 ggtttaaaat cacccggcag tcaattcttt ttattcaggc gaaaaattcc ccctgcgtta
    11281 ttccattacg cccgtcattt tgggggtaag tgcgccataa tcatttattg ttcggtaagt
    11341 aatattgctt cccgcatcag aaggcaattt aaccgtgctt tcgcccattg gaggcaccaa
    11401 ggcattttca agaacccggg ctccggcatt caactctgtt accgtcaggt aatagggtgt
    11461 cgggttaatc agcgtcagag aattcgcgct acgacgaaat cttaattttt ctgcggcctg
    11521 atcgggtggc aacgctaatt tagccggacg atagtacagt ttaatgcggc tgataattgc
    11581 gagctgtagc gtattctcag tcaattttga tttatccatt gacggaatcg ctttaacgtt
    11641 catccagaat aaactttccc ggtcctgtgg caattggtta tttgttgcat caagaatacg
    11701 caaggtattc tctttttttc ccttcatcgc aaacagagga ggcgtcacga taaaacgacc
    11761 atcctttaca ccatcggcat tttccaccca tgattgaatt aaataggtac tattttcatc
    11821 attatttgtc acggcaagtt gcacttgttt ttgccctgcc ggataaatta cgcgagtcgc
    11881 acctaaggcc actcccgctt cagcgcgtcc ggcaaccatc attgccatga acatcaggat
    11941 acctgccagc aagcagaatg ttatttcctg cgatttcctt acattgacgt ttttattact
    12001 cactgtcctg ttcctgttat cacattatct gctgaacaat tactgatagg ttaaagagaa
    12061 ccaggcctgg gcattggcga tgccgccagt aacccgacgc ccggtagcac gatatttggc
    12121 gatgaaatgt agcgaagtag agcctgagta aagccgtttc cagtttgctg gaggacgatt
    12181 aatcggtacg aggtttcctt catcatcaaa caacgctacg ccaatattgg tggctatccc
    12241 tggcccctct cccacggaaa gcacatccgg atttttacca tccgcgacac cgtgaaacgc
    12301 cacacccaca cgttcactca ccaccgtgct acattcccgt aaatgaataa caaaaggcac
    12361 cggtgcgcta tcttccccta ccgcatgaaa ccggttactg ctgatttgcc ccatattgac
    12421 cgtcatttgt ttatcaccgg cttcaatccg gcaagtttcc gcaataatga cgccctgaaa
    12481 ttgcatattt ccgccgggca gcgtggtatt ccatttattt ccggccagag caaacattgg
    12541 cagcaacgac gctaatagaa ataatctctt ccttttcatc gttattttta tcgcacaagg
    12601 gtgggcatcc ctgcccgtaa tgacgtccct gaacctgggt aggttattga tactgaacct
    12661 tgaaggtcgc atccgcatta gcagcacccg gggttgcggc accggttgca aaataacgcg
    12721 cctggaacgg aatggtgttg gttccgttat tcagggttgt ttctgaacta aatgtcgcac
    12781 cgtccagcgc cagcgcagca cccgttctgt ccaggatctg cacaccaacg tttgttgcgc
    12841 tacccgcagc tgaactctgc agagccagta catcagtatg cgtagcatca attgccgtac
    12901 ctaagaaggc aacagcggct tttgtggcaa cagtggtatc gcaatcattc agctgaatgt
    12961 taaaaccaac ggcagagctg gttgctccag cctgcttcag gctagcggta cgaacctggc
    13021 ccaactgaac ggtttgatca acagagcctg catcaactgc gcaagcggcg ttaacaactt
    13081 cccctttaaa gtgaacggtc ccaccattta ccgtcgtagt atcggccaga gccgctgcgg
    13141 aactgaggga cagagccgac agaacaacga ttgccagagt tttaattttc atgctgcttt
    13201 cctttaaaaa actatttcta aatcgacatg ggcagtcgtt ctgtacactt tgttttgtca
    13261 acgagtttga ctgccaacac tgcacagttt tcccccaaaa gatgaaacat ttggggccat
    13321 tttgactcat agaggaaagc atcgcgcaca aactttttca gtttatt
//
LOCUS       DAPGWB010000118        13321 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.119, whole genome shotgun sequence.
ACCESSION   DAPGWB010000118 DAPGWB010000000
VERSION     DAPGWB010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13321
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.119"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(40..996)
                     /locus_tag="RHX79_003359"
     CDS             complement(40..996)
                     /locus_tag="RHX79_003359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001678496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HDV2198495.1"
                     /translation="MTNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDS
                     LKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAV
                     MQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDV
                     TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYIL
                     LTGDEARFKAFISELTRRMPHHRERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLL
                     RLLLQNGADPEWIQRYTGLSAEQMQALDQPLPESKREPWIEY"
     gene            1463..2695
                     /gene="mdtM"
                     /locus_tag="RHX79_003360"
     CDS             1463..2695
                     /gene="mdtM"
                     /locus_tag="RHX79_003360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtM"
                     /protein_id="HDV2198496.1"
                     /translation="MPRFFARHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFN
                     ADVSLAPAAVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMT
                     QFLIARAVQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLIAPIIGPLSGAAL
                     MHFVHWKVLFAIIAVMGFISFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFCNRLFL
                     FGAATISLSYIPMMSWVAVSPVILIDAGGLTTSQFAWTQVPVFGAVIVANAIVARFVK
                     DPTEPRFIWRAVPIQLVGLALLIIGNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFT
                     LFSNNLPKGTVSASLNMVILMVMSVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLA
                     GLLNRVRQHQAAELAEER"
     gene            2736..4016
                     /locus_tag="RHX79_003361"
     CDS             2736..4016
                     /locus_tag="RHX79_003361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HDV2198497.1"
                     /translation="MNKLIELRRAKMLALSLLLIAAATFVVTLFLPPNFWVSGVKAIA
                     EAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSL
                     VALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAI
                     DKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEH
                     PLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRYAFDRATFALIDKLKNDP
                     EMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKADINSEDSRVKERIARAGQWFGE
                     TLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKD
                     LQFIRVNGTLVGGCIGLILYLLSQLPALFPLGNF"
     gene            4132..5283
                     /locus_tag="RHX79_003362"
     CDS             4132..5283
                     /locus_tag="RHX79_003362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase subunit D"
                     /protein_id="HDV2198498.1"
                     /translation="MSLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMP
                     QEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLV
                     VGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHE
                     ISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINE
                     LDAITARVRQQWEEGQRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGA
                     KATEQCVAETGDVYDALADKYLAIGCSCVSPNDQRLQMLSQMVEEYQVDGVVDVILQA
                     CHTYAVESLAIKRHVRQQHNIPYIAIETDYSTSDVGQLSTRVAAFIEML"
     gene            5293..6060
                     /locus_tag="RHX79_003363"
     CDS             5293..6060
                     /locus_tag="RHX79_003363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198499.1"
                     /translation="MTYSIGIDSGSTATKGILLADGVITRRFLVPTPFRPATAITEAW
                     ETLREGLETTPFLTLTGYGRQLVDFADKQVTEISCHGLGARFLAPATRAVIDIGGQDS
                     KVIQLDDDGNLCDFLMNDKCAAGTGRFLEVISRTLGTSVEQLDSITENVTPHAITSMC
                     TVFAESEVISLRSAGVAPEAILAGVINAMARRSANFIARLSCEAPILFTGGVSHCQTF
                     ARMLESHLGMPVNTHPDAQFAGAIGAAVIGQRVRTRR"
     gene            6057..6314
                     /locus_tag="RHX79_003364"
     CDS             6057..6314
                     /locus_tag="RHX79_003364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3343 domain-containing protein"
                     /protein_id="HDV2198500.1"
                     /translation="MKEFLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLC
                     IWLTCPPGEEIQWVIPGLTESIYCQQDGVWRCIAHYRVSPR"
     gene            6379..7239
                     /locus_tag="RHX79_003365"
     CDS             6379..7239
                     /locus_tag="RHX79_003365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418753.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiK family protein"
                     /protein_id="HDV2198501.1"
                     /translation="MTKSISLSKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQNY
                     HATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKD
                     LETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYS
                     RQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTL
                     LVLSHESRALQEVTLVGEVIGEISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNR
                     FYRFTPKSSH"
     gene            7307..8485
                     /locus_tag="RHX79_003366"
     CDS             7307..8485
                     /locus_tag="RHX79_003366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2198502.1"
                     /translation="MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAE
                     GAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRLRPLLLVSALASGLLILAMAWL
                     PPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLA
                     GLHFAFSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAIL
                     YGLAGFGYIIVATYLPLMAKDAGSPLLTAHLWTLVGLSIVPGCFSWLWAAKRWGALPC
                     LTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLL
                     GFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS
                     "
     gene            complement(8498..9052)
                     /gene="kptA"
                     /locus_tag="RHX79_003367"
                     /pseudo
     CDS             complement(8498..9052)
                     /gene="kptA"
                     /locus_tag="RHX79_003367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001151849.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2'-phosphotransferase"
     gene            9302..9985
                     /locus_tag="RHX79_003368"
     CDS             9302..9985
                     /locus_tag="RHX79_003368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418750.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198503.1"
                     /translation="MTQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWR
                     VFDFSVLNGSFGQLPGANGATTSFRGAGGAGAKDGFLFALELAPSVILSLGIISITDG
                     LGGLRAAQQLMTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKV
                     IFAAYQTSGSAIITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEER
                     RNPTQGAQA"
     gene            9982..10443
                     /locus_tag="RHX79_003369"
     CDS             9982..10443
                     /locus_tag="RHX79_003369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiG family protein"
                     /protein_id="HDV2198504.1"
                     /translation="MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKI
                     TGLLDWVGHICEPVMALWGLPGEAATVLLAALMSMGGAVGVAASLATAGALTGHDVTV
                     LLPAMYLMGNPVQNVGRCLGTAEVNAKYYPHIITVCVINALLSIWVMQLIV"
     gene            10456..11628
                     /gene="iadA"
                     /locus_tag="RHX79_003370"
     CDS             10456..11628
                     /gene="iadA"
                     /locus_tag="RHX79_003370"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HDV2198505.1"
                     /translation="MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPS
                     DIVPDCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVG
                     LLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIG
                     VKCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPVYDLLEN
                     CDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIP
                     LARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTS
                     SVAGFLNLTGKGEILPGNDADLLVMTPELRIEQVYARGKLMVKDGKACVKGTFETA"
     gene            11693..12604
                     /gene="hypT"
                     /locus_tag="RHX79_003371"
                     /gene_synonym="qseD"
     CDS             11693..12604
                     /gene="hypT"
                     /locus_tag="RHX79_003371"
                     /gene_synonym="qseD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypochlorite stress DNA-binding transcriptional
                     regulator HypT"
                     /protein_id="HDV2198506.1"
                     /translation="MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSR
                     RIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRK
                     IKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL
                     EAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS
                     ELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAY
                     AYRMNTRMNPVAERFWRELRELEIVLS"
     gene            complement(12597..12989)
                     /gene="iraD"
                     /locus_tag="RHX79_003372"
     CDS             complement(12597..12989)
                     /gene="iraD"
                     /locus_tag="RHX79_003372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313312.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraD"
                     /protein_id="HDV2198507.1"
                     /translation="MMRQSLQAVLPEISGNKTSLLRKSVCSDLLTLFNSPLSALPSLL
                     VSGMPEWQVHNQSDKHLQSWYCRQLRSALLFHEPRIAALQVNLKEAYSHTLAISLEIM
                     LYHDDEPLTFDLVWDNGGWRSATLENVS"
     gene            complement(12986..13069)
                     /gene="idlP"
                     /locus_tag="RHX79_003373"
     CDS             complement(12986..13069)
                     /gene="idlP"
                     /locus_tag="RHX79_003373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iraD leader peptide IdlP"
                     /protein_id="HDV2198508.1"
                     /translation="MENEHQYSGARCSGQAAYVAKRQECAK"
BASE COUNT         2981 a         3386 c         3427 g         3527 t
ORIGIN      
        1 agcgcatcag gctgctttgc gtttgtcatc agcctctgat tagtactcga tccatggttc
       61 gcgcttgctt tcaggcaagg gctgatctaa tgcctgcatt tgctctgccg aaagtccggt
      121 atatcgttgt atccattcag gatcggcccc attctgcaac aacaatcgga ggaggctccg
      181 ttccccttct actttccctt ctttcctccc cctctccctt cccaacagcc atccatcatt
      241 atgaattcgc tctgcaattg tcattattcg ctccctgtgg tgtggcattc gcctggtaag
      301 ttcgctgata aacgccttaa aacgcgcttc atcgccagtc agtaaaatgt aatttaacag
      361 cgcagttatc tggctgtcat tagcacactc tgtaaccagt aatactacca gttggtcaat
      421 aagccccatc agatcgcgct ggcgaatatg cttttggatc aactccaaca gggcgactct
      481 gcgatgctgc acaatctcgt cgtctggcac gacagtgaca tccaccagcg ggaacgctgc
      541 gctataaagt ttccgtgcgg tagtcggggc ggcaaattcg tccagccagc acagggacca
      601 gggataagga ctacggctac cgtgataaaa tagcatcggg atgaccagcg gtagcggccg
      661 acgtttatca tgctcgatat ggcgctgcat caccgccatg gaatagcgca tcaggcgaaa
      721 ggccatatga atgtcctcgc ggctctgatg ttcaatcacc acatagatat aaccatcgcc
      781 ttcgcgggtc tttaccgacc acagaatatc ggaatgtagc gcccgcaatt tttcatcgac
      841 aaagctggcg gattccagtt ttaagctgtc gagatcgcac agttcacgta aatctttagg
      901 taagtggatc tccataaaat cccgcgcggt gtccggatgc gtgagaaaag atttaaataa
      961 tgcgtcatgc ggcgtgctgg tcgtgaagtt tgtcatggcg atccgtcacc tgtagataag
     1021 atggcccaac tttagcgact aacaaaacca ttctcacccg gcaatttccc gttccccgag
     1081 gcgctttcca ggctattttt gttcgtctgc aaacgataca tttttccgga aacaggctcg
     1141 cgttttacat ttcctgtacc cggcagatat tcccctttcc accgcgctct tttgattaac
     1201 cgcaaatttt aattacactt aaggtgtata ttttctatgc aacccatcaa ttaaagaggt
     1261 gtaatgtgct gatgactatt tgtaatcgtt atacattctg acctggagtc agaaagtatt
     1321 tctctgtctg tgtgttcaca ggcagtgtga ttgattacat gaaattcagt acatttgccc
     1381 ttctcgcctg cctttcgtca ttaccgacgg tattgaattt cgttttcccc attggggttc
     1441 tccggacaag gagttgtttg ttatgccacg tttttttgcc cgccatgccg ctacgctgtt
     1501 tttcccgatg gcgttgattt tgtatgactt tgccgcctat ctttcgacgg atctgatcca
     1561 gccggggatc attaatgtgg tccgtgattt taatgccgat gtcagtctgg cccctgctgc
     1621 cgtcagtctc tatctcgctg gcggtatggc gttacagtgg ctgctggggc cactttccga
     1681 caggattggc cgcaggccag tgctgattac cggggcgctc atttttaccc ttgcctgcgc
     1741 tgcgacaatg ttcacaacgt ctatgacaca gtttcttatc gcgcgtgcag ttcagggtac
     1801 cagtatctgt tttattgcta ccgttggtta tgtcacggtg caggaggcgt tcggacagac
     1861 aaaagggatt aagttgatgg cgattatcac ctccatcgta ctgattgcgc cgattattgg
     1921 cccgctttcc ggcgcagctc tgatgcactt tgtgcactgg aaagtccttt ttgccatcat
     1981 tgcggttatg gggtttatct catttgttgg cttactgctg gcgatgccag agacggtgaa
     2041 gcgcggcgcg gttccattta gcgccaaaag cgtcttgcgc gattttcgta atgtcttttg
     2101 caatcggctg ttcctctttg gcgcagcaac catctcttta agctatatcc caatgatgag
     2161 ttgggtggct gtctcgccgg tgatcctgat cgacgcgggc ggcttaacaa cttcgcagtt
     2221 cgcctggaca caggttccgg tgttcggcgc ggtgattgtc gcgaatgcca tcgtggcgcg
     2281 tttcgttaaa gatccaaccg aaccgcgctt catctggcgt gccgtaccca ttcaactggt
     2341 cggcctcgcg ctgttgatta tcggcaatct gctgtcaccg cacgtctggc tgtggtcggt
     2401 gctgggcacc agtttgtatg ctttcgggat tggtttgatc ttcccgacct tattccgctt
     2461 tacgcttttt tccaataact taccgaaagg gaccgtctcc gcatcgctga atatggtgat
     2521 cctgatggtg atgtctgtct cggtcgaaat cggccgctgg ctgtggttta acggcggtcg
     2581 cttgccgttt catctgttag ccgtcgtggc gggcgttatc gtcgttttca ccctggcagg
     2641 attgcttaat cgcgtgcgcc aacatcaggc tgccgagctg gcggaggagc ggtgattttt
     2701 gcgcgatcct gccgtcaggc tctattctta acgttatgaa taaactcatt gaactcagac
     2761 gcgccaaaat gttggcgctc tctttactgc ttatcgccgc tgctaccttt gtcgttacgc
     2821 tgtttttgcc gcccaatttt tgggtgagcg gcgtgaaggc gattgctgaa gcggcgatgg
     2881 tcggcgcgct ggcggactgg tttgcggtgg tggcgctgtt tcgccgcgtg ccgattccga
     2941 tcatttctcg tcatacggcg attatcccgc gtaataaaga ccggattggc gaaaatctcg
     3001 gccagttcgt gcaggaaaaa tttctcgata cccagtcgct ggtggcattg attcgacgtc
     3061 acgaaccggc gttgttgatt ggcaactggt ttagtcagcc ggagaacgcc cgccgcgttg
     3121 gtcagcatct gttgcagatc atgagcggtt ttcttgaact gaccgatgat gcgcgtattc
     3181 agcgcctgct taagcgcgcg gtccatcggg cgattgataa ggtcgatctt tccggcacca
     3241 gtgcgttgat gctggagagt atgaccaaaa acgatcgtca tcaggtgctg ctggatacgc
     3301 tgatcgcgca gttgattgct cttctccagc gcgataaatc gcgcaagttt attgcccagc
     3361 aaattgttcg ctggctggag agcgagcatc cgctgaaagc caaaattttg cctactgaat
     3421 ggctgggcga acatagcgcg gagttggttt ctgacgcggt gaattctttg cttgatgata
     3481 tcagccgtga tcgtgcgcat cagatccgtt atgcgtttga tcgcgccact tttgccctga
     3541 tcgacaagtt gaaaaacgat ccggaaatgg cagcgcgagc cgatgccgta aaaagttatc
     3601 tgaaagaaga tgaagctttt aaccgctatc tcagtgaatt gtggggggat ttacgggagt
     3661 ggctgaaagc ggatatcaac agtgaagatt ctcgtgtgaa agaacgtatc gcgcgggcgg
     3721 gtcaatggtt tggcgaaacg ttaattgccg atgatgcctt gcgggcgtcg ttaaatggtc
     3781 acctggaaca agccgcgcac cgcgtcgcgc ctgagttttc cgcattcctg acgcgccaca
     3841 tcagcgatac agtaaaaagc tgggatgcgc gggatatgtc acggcaaatc gagttaaata
     3901 tcggcaaaga tctgcagttt atccgtgtca acggtacgct ggttggcggt tgtattgggc
     3961 taattttata tttgttgtcg cagctcccgg ccttgttccc cctcggcaat ttttagaaat
     4021 ccatgaaaaa ctaagtggct aaccgcgaga gagatcaaat aaaccacact aaaagaatgg
     4081 taataatgtg gcctcttttc attatctccc gtggtacggg gaaggaaaat catgtcactt
     4141 atcaccgatc tacccgccat tttcgatcag ttctctgaag ctcgccagaa aggctttctc
     4201 accgtcatgg atctcaagga gcgcggcatt ccgctggttg gcacttactg cacctttatg
     4261 ccgcaagaga tcccgatggc agccggtgcg gttgtggttt cgctctgttc cacctctgat
     4321 gaaaccattg aagaagcgga gaaagatctg ccgcgcaacc tctgcccgct gattaaaagt
     4381 agctacggct tcggcaaaac cgataaatgc ccctacttct acttttcgga tctggtggtc
     4441 ggtgaaacca cctgcgacgg caaaaagaaa atgtatgaat acatggcgga gtttaagcct
     4501 gttcatgtga tgcagctgcc gaacagcgtt aaggacgatg cctcgcgtgc attatggaaa
     4561 gccgagatgc tgcgcttgca aaaaacggta gaagaacgtt ttgggcacga gattagcgaa
     4621 gatgctctgc gcgatgccat tgcgctgaaa aaccgcgaac gtcgcgcact ggctaatttt
     4681 tatcatcttg ggcagttaaa tcctccggcg cttagcggca gcgacattct gaaagtggtt
     4741 tacggcgcaa ccttccggtt cgataaagag gcgttgatca atgaactgga cgcgataacc
     4801 gcccgcgttc gtcagcagtg ggaagaaggc cagcgacttg acccgcgtcc acgcatttta
     4861 atcaccggct gcccgattgg cggcgcagca gaaaaagtgg tgcgggcgat tgaagagaat
     4921 ggcggctggg ttgtcggtta tgaaaactgc accggggcga aagcgaccga gcaatgcgtg
     4981 gcagaaacgg gcgatgtcta cgacgcgctg gcggataaat atctggcgat tggctgctcc
     5041 tgtgtttcgc cgaacgatca gcgcctgcaa atgctcagcc agatggtgga agaatatcag
     5101 gtcgatggcg tagttgatgt gattttgcag gcgtgccata cctacgcggt ggaatcgctg
     5161 gcgattaaac gtcatgtgcg tcagcagcac aacattcctt atatcgctat tgaaacagac
     5221 tactccacct cagatgtcgg gcagctcagt acccgtgtcg cggcctttat tgagatgctg
     5281 taaggagtgg cagtgacata ttcgattggc attgattctg gttctaccgc caccaaaggg
     5341 atcttactgg cagacggcgt gattacgcgc cgtttcctcg ttccaacacc ctttcgtccg
     5401 gcaacagcaa ttactgaagc ctgggaaact ctgcgcgaag ggttagagac aacgccgttt
     5461 ctgacgctca ccggctatgg acggcaactg gtggattttg ccgataaaca agtgacggaa
     5521 atctcctgtc acgggctggg cgcacggttt cttgcgccag caacgcgcgc ggtaatcgac
     5581 atcggtggtc aggacagcaa agtgattcag cttgatgatg acggtaacct gtgcgatttc
     5641 ctgatgaatg acaaatgcgc ggcgggcacc gggcgtttcc tggaggtgat ctcgcgcacg
     5701 cttggcacca gcgtcgagca actcgacagc attaccgaaa atgtcacgcc gcatgccatc
     5761 acgagtatgt gcacagtgtt tgccgaatca gaagtgatca gcctgcgctc agcgggcgtc
     5821 gcgccagaag cgattctcgc cggagtgatt aacgcgatgg cgcggaggag tgccaatttc
     5881 attgctcgtc tctcctgtga agcgccgatt ctgtttactg gtggcgttag tcattgccag
     5941 acgtttgccc ggatgctgga atctcacctg ggaatgccgg taaataccca ccctgatgcg
     6001 caatttgctg gcgcaattgg cgcggcggta attggtcaac gagtgaggac acgccgatga
     6061 aagagttttt atttttattt cactccacag tcggcgtcat acaaacccgc aaagcgttgc
     6121 aggcagcggg catgactttt cgcgtcagcg atattccccg tgatttacgc ggcggctgcg
     6181 ggttatgcat ttggctgacc tgtccccccg gcgaggaaat acaatgggtg atccctgggc
     6241 tgactgagtc aatttattgt cagcaggatg gtgtctggcg ctgcattgca cattaccggg
     6301 tttctccgcg ttaaggattc attaaggtcg ctacgtatac ttctcgatat cttattgatt
     6361 tgccttaaag ggattaccgt gacaaaaagt atttcgttaa gtaaacgcat ctccgttatt
     6421 gtgattcttt ttgccattgt ggcagtgtgt actttcttcg tgcaatcttg cgcccgtaaa
     6481 agcaatcatg cagcatcatt tcagaattac cacgccacca ttgacggcaa agaaattgca
     6541 ggcataacga ataatatctc ttcgctgacc tggtcggcac aaagcaatac tctttttagc
     6601 actatcaaca aacctgccgc cattgttgaa atgaccacca atggtgattt tatccgcaca
     6661 attcctctgg attttgttaa ggatctcgag acgatcgaat acattggcga taatcagttt
     6721 gtcattagcg atgagcgcga ttacgccatt tatgtgattt cactgacccc aaactcggaa
     6781 gtaaaaatcc tcaaaaaaat aaaaatcccg ctgcaagact ccccaaccaa ttgcggtttt
     6841 gaagggttgg cttattctcg ccaggatcac actttctggt tttttaaaga gaaaaatccg
     6901 attgaggtct acaaagttaa cgggctgtta agtagcaatg aattacacat cagcaaagac
     6961 gaggcactac aacggcaatt tactttagat gatgtgtccg gcgcagaatt taaccagcaa
     7021 aaaaatacgc ttctggtgct gtctcatgaa tctcgcgcac tccaggaagt aaccctggtt
     7081 ggcgaggtta tcggtgaaat atcactaacc aaaggtagtc gaggtttgtc gcataacatc
     7141 aaacaggccg aagggattgc gatggatgcc tctggtaata tttatatcgt tagcgaacca
     7201 aatcgttttt atcgctttac ccctaaatca tcgcattaac aggctggcat atttcacctt
     7261 tttgttatta acttgttaac aacaaaaatg acatacaagg ttaaacatgc cttcgtcctc
     7321 gcatcccgta gaacgctttt ctttcagcac cgcgcttttc gggatgctgg ttctgacctt
     7381 aggtatggga ttaggtcgct tcctttatac gcctatgttg cccgtcatga tggcggaagg
     7441 ggcgttttca tttagccagc tctcgtggat tgccagcggc aactatgcgg ggtatctggc
     7501 tggcagtctg ctattttcgt ttggcgcatt tcaccagccg tcgcgcctgc gcccattact
     7561 gttggtttct gccctggcga gcgggttgtt gatcctcgca atggcatggt tgccgccatt
     7621 tattctggtg ttattaattc gcttcctggc gggtgtcgcc agcgccggta tgctgatttt
     7681 tggttcgacg ctgattatgc agcacacgcg ccatcctttt gtgctggcag ctttgttttc
     7741 tggcgttggc attggcattg cactgggcaa cgaatatgtt ctggcaggcc tgcattttgc
     7801 cttctcctcg caaacgttat ggcaaggcgc cggggcgctt tctggcatga tgctgattgc
     7861 acttacgctt ttaatgccct cgaaaaaaca cgccatcgca ccaatgccat tggcaaaaac
     7921 ggagcaacag ataatgagct ggtggttact ggctattctg tacggcctgg caggatttgg
     7981 ttatatcatc gtcgcgactt acctgccgct catggcgaaa gatgcaggct caccattgtt
     8041 aaccgcccat ctctggacgt tagtcggctt atcaattgtg ccaggctgct ttagctggct
     8101 atgggcagca aaacgttggg gggctttgcc ttgcctgacg gcgaatttgc tggtgcaggc
     8161 tatcagtgtg ctgcttactc tcgccagcga ctctcctctc ttgcttatca ttagtagtat
     8221 cggttttggc ggtaccttta tgggcacgac atctctggtg atgactatcg cccgccaact
     8281 gagcgttccg ggaaatctca atcttttagg ctttgtgacg ctcatttacg gcattggaca
     8341 aatcctcggc ccggcgctga ccagtatgct tggcaatgga acatcggcgc ttgccggcgc
     8401 cactctctgc ggcgcggcgg cgttgtttat tgctgcgctt atcagcacag tacaattatt
     8461 taagctgcaa gtggtcactt catgaggagt gtttccctta ccactcaaga aattcgaccg
     8521 caaccgttga tgtcagccag actccgtttt ccgcttgcca gaaagggatg cctcgtttcg
     8581 ccatttcctg tgctttgacg gttaagataa ccggcgatcc gtgtcttgct cacactttgc
     8641 gtgccgttgc ttcatcagca gagagatgca cgtaatgacg ctcccctgca atcagcccct
     8701 gtttttttat ctcgtcaagg aaacggcttg ccgtaccgtg gtaaagaaac tgtggcggtg
     8761 ttttttcggc aaaggaaata gcgacctgcg aagtcgaatg cccctgaacc gcgcggatgc
     8821 acctaccatc actggaataa ctaaaacgct ttttatcact ggtggcgacc acggtatcca
     8881 gcaatgtacg ggttaatcgc ttgcccgctt tttgggcaca aagtatgagc ttatcgatat
     8941 ccgcccatcc ttcacggtca agtacgatac caatcgcctc cggtttgtgt cggaggacaa
     9001 aacttaaaaa cttgctcgta tccgccaact ctttttcgtt gtactttgcc atctcgtttt
     9061 cgtccctgga ttttctgttt ttatttactg atgtcattgt cactgggttt atgaattttc
     9121 tgcaactcaa tcctgcgcag agccttttcc acacagcata atttttccgc tatgcaaaaa
     9181 acgcatagcc agaaacatac ttgcattttc cccataccca catggctgat aaggtttttc
     9241 cgctccagga attttcctgg ctcaagcaac acacaaacac aaaaaaacaa tggggattgt
     9301 tatgacacaa caaggggatg ctgtagccgg ggagctggcg acagaaaaag tgggcattaa
     9361 agggtatctg gctttttttc tcaccataat ctttttttcc ggtgtttttt ccggaacaga
     9421 cagctggtgg cgcgtttttg atttttccgt tctgaacgga tcgtttgggc aactgcctgg
     9481 tgcgaacgga gccaccacct catttcgcgg ggcgggtggc gcgggggcta aagatggctt
     9541 tctctttgcg ctggagctgg caccgtcagt cattctctct ctggggatta tttcaattac
     9601 cgatggtctt ggtggattac gcgccgcgca gcagttaatg acacctgtgc taaaaccgtt
     9661 gttgggcatt ccagggatct gctcgctggc gctgatcgct aacctgcaaa acacggatgc
     9721 cgccgccggt atgaccaaag agctggcgca ggaaggtgaa attaccgaac gcgataaagt
     9781 gattttcgcc gcatatcaaa ccagcggtag cgccatcatc accaactact tctcttccgg
     9841 cgtcgcggtg tttgcctttc tgggcacgtc cgtaatcgta cctttagccg tcatcctggt
     9901 gtttaaattt gtcggagcca acattttgcg cgtctggctt aacttcgaag aacgtcgcaa
     9961 cccaacgcaa ggagcgcaag catgacaact caggtccgca aaaatgtcat ggatatgttt
    10021 atcgatggtg cgcgccgtgg ctttactatc gccacgacca acctgctgcc aaacgtggtg
    10081 atggcgtttg tcatcattca ggcgctgaaa attaccggcc tgctcgactg ggtggggcat
    10141 atctgtgaac ccgtaatggc gctgtgggga ttgcccggtg aagcggcaac cgtcctttta
    10201 gccgcattaa tgagtatggg cggcgcagtc ggtgttgccg ccagtctggc gaccgccggc
    10261 gcattaaccg gtcacgatgt caccgtttta ctgcccgcga tgtatttaat gggcaacccg
    10321 gtgcaaaatg tcggtcgctg cctggggaca gccgaagtga atgccaaata ttacccgcat
    10381 atcattacgg tctgcgtgat taacgcattg ctgtcgatct gggttatgca gcttattgtt
    10441 taacaaggag ttaccatgat tgattatacc gcagccggtt ttaccctgct gcagggagcg
    10501 catttgtatg cgccggaaga tcggggaatt tgcgatgtcc tcgtcgctaa cggcaaaatt
    10561 atcgccgttg ccagcaatat cccttctgac attgtaccgg actgcacggt tgtcgatctc
    10621 agcgggcaga tcctctgtcc tggttttatt gatcaacacg tccatttgat tggtggtggc
    10681 ggcgaagcag gtcccacgac gcgcacgcca gaagtggcgc taagtcgcct gacggaagcg
    10741 ggcgtcacgt cagtggttgg tctgctgggc accgactcta tctctcgcca cccggaatcc
    10801 ctgctcgcca agacccgtgc gctcaatgaa gaaggcatca gcgcctggat gctgaccggc
    10861 gcttatcatg tcccttcccg caccattaca ggttccgtgg aaaaagacgt ggcgattatc
    10921 gatcgtgtga ttggcgtgaa atgcgccatc tctgatcacc gttctgccgc accggacgtt
    10981 tatcacctgg ctaatatggc ggcggaatcc cgcgttggcg gtttgctcgg cggtaaacct
    11041 ggcgtcaccg tgttccacat gggcgacagc aaaaaggcgt tacagcctgt ctatgacctg
    11101 ctggaaaact gcgatgtgcc gatcagcaag ttgctgccga cccacgttaa ccgcaacgtt
    11161 ccgttgtttg agcaggcgct ggagttcgcg cgcaaaggcg gcactatcga tatcaccagc
    11221 agcattgacg aaccggtcgc ccctgccgaa ggtattgccc gcgccgttca ggcgggtatt
    11281 ccgctggcac gcgtcaccct cagctccgac ggcaacggta gccagccgtt cttcgatgac
    11341 gaagggaatt taacccatat cggtgttgcc ggttttgaaa cgttgctgga aaccgtgcag
    11401 gtgctggtca aagactatga tttcagtatc agcgatgccc tgcgcccgct caccagtagc
    11461 gtagccggtt tccttaacct gaccgggaaa ggcgaaattc tgccaggcaa tgatgctgac
    11521 ttgctggtca tgacgccaga actgcgcatt gagcaggtat acgctcgcgg caaactgatg
    11581 gtcaaagacg gcaaagcctg cgtgaaagga acgtttgaaa cggcttaaac ggttgtcagc
    11641 cgcccgaatg gacgtagaat gcccgcaagg gcggctgaca gagtaaaacg taatggatga
    11701 ctgtggtgcg attttgcata atattgaaac caaatggctt tatgattttc tgaccctgga
    11761 aaaatgccgc aatttttccc aggcggcagt cagtcgcaac gtctcgcaac cggcattcag
    11821 ccgccgcatc cgtgcgctgg aacaggcgat tggtgttgaa ttgtttaacc gccaggtaac
    11881 gccgctgcaa ctctcagaac aagggaaaat cttccattcg cagatccgcc atctgttgca
    11941 acagttagag agcaatctgg cagagctgcg tggcggcagc gattacgcgc aacgaaaaat
    12001 caagatagcc gctgcacact ctctttccct cgggctgtta ccgtccatta tcagccagat
    12061 gccgccgctc tttacctggg caattgaagc tattgatgtc gatgaagcgg tcgataaact
    12121 gcgtgaaggg caaagtgact gtattttttc ctttcacgac gaagatttgc tggaagcgcc
    12181 gtttgaccac attcgcttat ttgaatctca attgttccct gtctgcgcca gtgacgaaca
    12241 cggagaagca ctttttaacc tcgcgcagcc acactttccg ttactgaatt acagccgcaa
    12301 ctcctacatg gggcgattga ttaatcgcac cctgacgcgc cacagtgagt taagtttcag
    12361 cacctttttt gtctcttcga tgagcgagct tttaaagcag gttgccctcg acggctgtgg
    12421 gattgcctgg ctgccggagt acgccatcca acaagaaatt cgcagcggga agctcgttgt
    12481 actgaatcgg gacgaactgg tgatcccgat tcaggcctat gcataccgaa tgaatacccg
    12541 catgaatcca gttgccgaac gcttctggcg tgaactgcgc gagctggaga ttgtacttag
    12601 ctgacattct ccagcgtcgc actgcgccaa ccgccattat cccagaccag atcaaacgtt
    12661 agcggttcat cgtcgtggta cagcattatc tcaaggctga tcgccagcgt gtgactgtac
    12721 gcttctttca gattgacctg caacgccgca atccgtggct catgaaataa cagtgcagaa
    12781 cgcagctgac ggcaatacca gctctggaga tgtttgtcgc tctggttatg cacttgccac
    12841 tcgggcatgc ctgaaacaag taatgacggt aatgccgaaa gaggagaatt aaaaagagtg
    12901 aggagatcgc tgcataccga tttacgcagc aatgacgttt tattgcctga aatttcaggt
    12961 aaaacagcct gaagtgattg gcgcatcatt ttgcgcactc ctgacgttta gcaacatatg
    13021 cggcttgccc tgaacaccgg gcgccactgt attgatgctc attttccata gccattccct
    13081 tttgttcatt acatccatgt cagtctgaga caggcctgaa tcctgtcagc aaagtataaa
    13141 accttacttg cctatgaata tctactgact tttcaggaaa aaagtcatga tttgataaaa
    13201 atcatcaaac tcaaaaaaaa accgctagta tattctgaat attccgaata gttacgtaga
    13261 tgaaaatact tgtcaccgcc gctacttaat tccggtggga aattatttat ttccgcataa
    13321 t
//
LOCUS       DAPGWB010000119        13297 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.120, whole genome shotgun sequence.
ACCESSION   DAPGWB010000119 DAPGWB010000000
VERSION     DAPGWB010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13297
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.120"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            43..1032
                     /gene="tdcB"
                     /locus_tag="RHX79_003374"
     CDS             43..1032
                     /gene="tdcB"
                     /locus_tag="RHX79_003374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HDV2198509.1"
                     /translation="MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEI
                     FLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGK
                     VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIA
                     GQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAA
                     SFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR
                     NKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA"
     gene            1054..2385
                     /gene="tdcC"
                     /locus_tag="RHX79_003375"
     CDS             1054..2385
                     /gene="tdcC"
                     /locus_tag="RHX79_003375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine transporter TdcC"
                     /protein_id="HDV2198510.1"
                     /translation="MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRA
                     GFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITF
                     LYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLM
                     VKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIM
                     VFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLF
                     TLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGH
                     YLGTLEGLNGLILKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAM
                     GAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF"
     gene            2411..3619
                     /gene="tdcD"
                     /locus_tag="RHX79_003376"
     CDS             2411..3619
                     /gene="tdcD"
                     /locus_tag="RHX79_003376"
                     /EC_number="2.7.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate kinase"
                     /protein_id="HDV2198511.1"
                     /translation="MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAF
                     LSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITD
                     EVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLP
                     WKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQS
                     VDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLS
                     SDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLI
                     RRLVMEHLAVLGVEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHL
                     GKVNAPAEFA"
     gene            3653..5947
                     /gene="tdcE"
                     /locus_tag="RHX79_003377"
     CDS             3653..5947
                     /gene="tdcE"
                     /locus_tag="RHX79_003377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-ketobutyrate formate-lyase/pyruvate
                     formate-lyase"
                     /protein_id="HDV2198512.1"
                     /translation="MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGD
                     ESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIV
                     GLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPD
                     MLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDL
                     EATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNG
                     GAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSG
                     DPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYA
                     AQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYA
                     INGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDK
                     YSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDG
                     EYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNT
                     PDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKE
                     DPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGY
                     AVRFNALTREQQQDVISRTFTQAL"
     gene            5961..6350
                     /locus_tag="RHX79_003378"
     CDS             5961..6350
                     /locus_tag="RHX79_003378"
                     /EC_number="3.5.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312020.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enamine/imine deaminase"
                     /protein_id="HDV2198513.1"
                     /translation="MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPA
                     DVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATY
                     PTRSCVQVARLPKDVKLEIEAIAVRSA"
     gene            6422..7786
                     /gene="tdcG"
                     /locus_tag="RHX79_003379"
     CDS             6422..7786
                     /gene="tdcG"
                     /locus_tag="RHX79_003379"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDV2198514.1"
                     /translation="MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSH
                     IVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGA
                     HIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLS
                     HDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHD
                     GIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISG
                     AEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPC
                     IERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIK
                     VVCG"
     gene            8060..9391
                     /locus_tag="RHX79_003380"
     CDS             8060..9391
                     /locus_tag="RHX79_003380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026203.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HDV2198515.1"
                     /translation="MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMS
                     IGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSV
                     ISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGL
                     VLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLV
                     KNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFF
                     YAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFG
                     VYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTS
                     ICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS"
     gene            9419..10729
                     /locus_tag="RHX79_003381"
     CDS             9419..10729
                     /locus_tag="RHX79_003381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HDV2198516.1"
                     /translation="MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAEL
                     EGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQ
                     AIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNG
                     VVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEG
                     LSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQ
                     GITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAA
                     GMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDT
                     AVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR"
     gene            complement(10941..11105)
                     /locus_tag="RHX79_003382"
     CDS             complement(10941..11105)
                     /locus_tag="RHX79_003382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312016.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198517.1"
                     /translation="MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAE
                     TRLAEDEATA"
     gene            complement(11128..11829)
                     /locus_tag="RHX79_003383"
     CDS             complement(11128..11829)
                     /locus_tag="RHX79_003383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HDV2198518.1"
                     /translation="MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLN
                     QEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYS
                     EHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVW
                     LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITL
                     VADSPLRALLIDLPV"
     gene            11934..12830
                     /gene="yhaJ"
                     /locus_tag="RHX79_003384"
     CDS             11934..12830
                     /gene="yhaJ"
                     /locus_tag="RHX79_003384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator YhaJ"
                     /protein_id="HDV2198519.1"
                     /translation="MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQK
                     LEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIV
                     TEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSS
                     EINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLD
                     KQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWR
                     RDSMGEAKSWCLREIPKLFSGK"
     gene            complement(12881..13237)
                     /locus_tag="RHX79_003385"
     CDS             complement(12881..13237)
                     /locus_tag="RHX79_003385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDV2198520.1"
                     /translation="MQWYLAVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLIL
                     GLEFPFLSLIYLAATIIPVIALCVRRLHDTDRSGAWALLYLVPIIGWLVLFVFACLEG
                     NSGSNRYGNDPKFGSN"
BASE COUNT         3133 a         3167 c         3619 g         3378 t
ORIGIN      
        1 tacggttacc tacatattta attcaggcga agaggtttta taatgcatat tacatacgat
       61 ctgccggttg ctattgatga cattattgaa gcgaaacaac gactggctgg gcgaatttat
      121 aaaacaggca tgcctcgctc aaactatttt agtgaacgtt gcaaaggtga aatattcctg
      181 aagtttgaaa atatgcagcg tacgggttca tttaaaattc gtggcgcatt taataaatta
      241 agttcactga ccgatgcgga aaaacgcaaa ggcgtggtgg cctgttctgc gggcaaccat
      301 gcgcaagggg tttcgctctc ctgcgcgatg ctgggtatcg acggtaaagt ggtgatgcca
      361 aaaggtgcgc caaaatccaa agtagcggca acgtgcgact actccgcaga agtcgttctg
      421 catggtgata atttcaacga cactatcgct aaagtgagcg aaattgtcga aatggaaggt
      481 cgtattttta tcccacctta cgatgatccg aaagtgattg ctggccaggg aacgattggt
      541 ctggaaatta tggaagatct ctatgatgtc gataacgtga ttgtgccaat tggtggtggt
      601 ggtttaattg ctggtattgc ggtggcaatt aaatctatta acccgaccat tcgtgttatt
      661 ggcgtacagt cagaaaacgt tcacggcatg gcggcttctt tccactccgg agaaataacc
      721 acgcaccgaa ctaccggcac cctggcggat ggttgtgatg tctcccgccc gggtaattta
      781 acttacgaaa tcgttcgtga attagtcgat gacatcgtgc tggtcagcga agacgaaatc
      841 agaaacagta tgattgcctt aattcagcgc aataaagtcg tcaccgaagg cgcaggcgct
      901 ctggcatgtg ctgcattatt aagcggtaaa ttagaccaat atattcaaaa cagaaaaacc
      961 gtcagtatta tttccggcgg caatatcgat ctttctcgcg tctctcaaat caccggtttc
     1021 gttgacgctt aattaattcg ttgaggatag gatatgagta cttcagatag cattgtatcc
     1081 agccagacaa aacaatcgtc ctggcgtaaa tcagatacca catggacgtt aggcttgttt
     1141 ggtacggcaa tcggcgccgg ggtgctgttc ttccctatcc gcgcaggttt tggcggactg
     1201 atcccgattc ttctgatgtt ggtattggca taccccatcg cattttattg ccaccgggcg
     1261 ctggcgcgtc tgtgtctttc tggctctaac ccttccggca acattacgga aacggtggaa
     1321 gagcattttg gtaaaactgg cggcgtggtt atcacgttcc tgtacttctt cgcgatttgc
     1381 ccactgctgt ggatttatgg cgttactatt accaatacct ttatgacgtt ctgggaaaac
     1441 cagctcggat ttgcaccgct gaatcgcggc tttgtggcgc tgttcctgtt gctgctgatg
     1501 gctttcgtca tctggtttgg taaggatctg atggttaaag tgatgagcta cctggtatgg
     1561 ccgtttatcg ccagcctggt gctgatttct ctgtcgctga tcccttactg gaactctgca
     1621 gttatcgacc aggttgacct cggttcgctg tcgttaaccg gtcatgacgg tatcctgatc
     1681 actgtctggc tggggatttc catcatggtt ttctccttta acttctcgcc aatcgtctct
     1741 tccttcgtgg tttctaaacg tgaagagtat gagaaagact tcggtcgcga cttcaccgaa
     1801 cgtaaatgtt cccaaatcat ttctcgtgcc agcatgctga tggttgcagt ggtgatgttc
     1861 tttgccttta gctgcctgtt tacgctgtct ccggccaaca tggcggaagc caaagcgcag
     1921 aatattccag tgctttctta tctggctaac cactttgcgt ccatgaccgg taccaaaaca
     1981 acgttcgcga ttacactgga atatgcggct tccatcatcg cactcgtggc tatcttcaaa
     2041 tctttcttcg gtcactatct ggggacgctg gaaggcttga atggtctgat tctgaagttc
     2101 ggttataaag gcgacaaaac taaagtgtcg ctgggtaaac tgaacactat cagcatgatc
     2161 ttcatcatgg gctccacctg ggttgttgcc tacgccaacc cgaacatcct tgacctgatt
     2221 gaagccatgg gcgcaccgat tatcgcatcc ctgctgtgcc tgttgccgat gtatgccatc
     2281 cgtaaagcgc cgtctctggc gaaataccgt ggtcgtctgg ataacgtgtt tgttaccgtg
     2341 attggtctgc tgaccatcct gaacatcgta tacaaactgt tttaatccgt aactcaggat
     2401 gagaaaagag atgaatgaat ttccggttgt tttggttatt aactgtggtt cgtcttcgat
     2461 taagttttcc gtgctcgatg ccagcgactg tgaagtatta atgtcaggta ttgccgacgg
     2521 tattaactcg gaaaatgcat tcttatccgt aaatggggga gagccagcac cgctggctca
     2581 ccacagctac gaaggtgcat tgaaggcaat tgcatttgaa ctggaaaaac ggaatttaaa
     2641 tgacagtgtg gccttaattg gccaccgcat cgctcacggc ggcagtattt ttaccgagtc
     2701 cgccattatt accgatgaag tcattgataa tatccgtcgc gtttctccac tggcacccct
     2761 gcataattac gccaatttaa gtggtattga atcggcgcag caattatttc cgggcgtaac
     2821 tcaggtggcg gtatttgata ccagtttcca ccagacgatg gctccggaag cttatttata
     2881 cggcctgccg tggaaatatt atgaagagtt aggtgtacgc cgttatggtt tccacggcac
     2941 gtcgcaccgc tatgtttccc agcgcgcaca ctcgctgctg aatctggcgg aagatgactc
     3001 cggcctggtt gtggcgcatc ttggcaatgg cgcgtcaatc tgcgcggttc gcaacggtca
     3061 gagtgttgat acttcaatgg gaatgacgcc gctggaaggc ttgatgatgg gtacccgcag
     3121 tggcgatgtc gactttggtg cgatgtcctg ggtcgccagc caaaccaacc agagcctggg
     3181 tgacctggaa cgcgtagtga ataaagagtc gggattatta ggtatttccg gtctttcttc
     3241 ggatttacgt gttctggaaa aagcctggca tgaaggtcac gaacgcgcgc aactggcaat
     3301 taaaaccttt gttcaccgaa ttgcccgtca tattgccgga cacgcagctt cattacgtcg
     3361 cctggatgga attatattca ccggcggaat aggagagaat tcaagcttaa ttcgtcgtct
     3421 ggtcatggaa catttggctg tattaggcgt agagattgat acagaaatga ataatcgctc
     3481 taactcctgt ggtgagcgaa ttgtttccag tgaaaatgcg cgtgtcattt gcgctgttat
     3541 tccgactaac gaagaaaaaa tgattgcttt ggatgccatt catttaggca aagttaacgc
     3601 gcccgcagaa tttgcataat ttagttgaag tattgtagag agattatttt tcatgaaggt
     3661 agatattgat accagcgata agctgtacgc cgacgcatgg cttggcttta aaggtacgga
     3721 ctggaaaaac gaaattaatg tccgcgattt tattcaacat aactatacac cgtatgaagg
     3781 cgatgaatct ttcctcgccg aagcgacgcc tgccaccacg gaattgtggg aaaaagtaat
     3841 ggaaggtatc cgtatcgaaa acgcaaccca cgcgccggtt gatttcgata ccaatattgc
     3901 caccacaatt accgctcatg atgcgggata tattaaccag ccgctggaaa aaattgttgg
     3961 cctgcaaacg gatgcgccgt tgaaacgtgc gctacacccg ttcggtggca ttaatatgat
     4021 taaaagttca ttccacgcct atggccgtga aatggacagt gaatttgaat atctgtttac
     4081 cgatctgcgt aaaacccata accagggcgt atttgatgtt tactcaccgg atatgctgcg
     4141 ctgccgtaaa tctggcgtgc tgaccggttt accagatggc tatggccgtg ggcgcattat
     4201 cggtgactat cgccgcgtag cgctgtatgg catcagttat ctggtacgtg aacgcgaact
     4261 gcaatttgcc gatctccagt ctcgtctgga aaaaggcgag gatctggaag ccaccatccg
     4321 tctgcgtgag gagctggcag agcatcgtca tgcgctgttg cagattcagg aaatggcggc
     4381 gaaatatggc tttgatatct ctcgcccggc gcagaatgcg caggaagcgg tgcagtggct
     4441 ctacttcgct tatctggcgg cagtgaaatc gcaaaatggc ggcgcgatgt cgctgggccg
     4501 cacggcatcg ttcctcgata tctacattga gcgcgacttt aaagctggcg tactcaatga
     4561 gcagcaggca caggaactga tcgatcactt catcatgaag atccgtatgg tacgcttcct
     4621 gcgtacaccg gaatttgatt cgctgttctc cggcgaccca atctgggcga cggaagtgat
     4681 cggcgggatg gggctggacg gtcgtacgct ggtgaccaaa aactccttcc gctatttgca
     4741 caccctgcac actatggggc cggcaccgga acctaacctg accattcttt ggtcggaaga
     4801 attaccgatt gccttcaaaa aatatgccgc gcaggtgtcg atcgtcacct cttccttgca
     4861 gtatgaaaat gacgatctga tgcgtactga cttcaacagc gacgattacg cgattgcctg
     4921 ctgcgtcagc ccaatggtga ttggtaagca aatgcagttc tttggtgcac gcgctaacct
     4981 ggcgaaaacg ctgctctacg caattaacgg cggggtggac gagaagctga agattcaggt
     5041 cgggccgaaa acagcaccgc tgatggacga cgtgctggat tacgacaaag tgatggacag
     5101 cctcgatcac ttcatggact ggctggcggt gcagtacatc agcgcgctga atatcattca
     5161 ctacatgcac gacaagtaca gctacgaagc ttcgctaatg gcgctgcacg atcgtgatgt
     5221 ctatcgcact atggcatgcg gcatcgcggg cctgtcggtg gcgacggact ccctgtctgc
     5281 catcaaatat gcccgcgtga aaccaatccg tgacgaaaac ggcctggcgg tggactttga
     5341 aatcgacggt gaatatccgc agtacggcaa caacgacgag cgcgtagaca gcattgcctg
     5401 cgacctggtt gaacgcttta tgaagaaaat taaagcgctg ccaacctatc gcaacgccgt
     5461 ccctacccag tcgattctga ctatcacttc taacgtggtg tacggccaga aaaccggtaa
     5521 tacgccggac ggtcgtcgcg ccggaacacc gttcgcgccg ggcgctaacc cgatgcatgg
     5581 tcgtgaccgc aaaggtgccg tggcctcatt gacgtcggtg gcgaaactgc cgttcaccta
     5641 cgccaaagat gggatctcgt acaccttctc aatcgttcct gcggcgctgg gcaaagaaga
     5701 tccagtacgt aaaaccaacc ttgtcggcct gctggatggg tatttccacc acgaagcgga
     5761 tgtcgaaggc ggtcaacacc tcaacgtcaa cgtaatgaat cgggaaatgc tgctggatgc
     5821 catcgagcac ccggaaaaat atcctaacct gacaatccgt gtctctggct acgccgtgcg
     5881 cttcaacgca ctgacccgtg aacagcaaca ggatgttatt tcacgtactt ttacccaggc
     5941 gctctgacgc cggaggatgt atgaaaaaga ttatcgaaac gcaacgtgcc ccaggcgcaa
     6001 tcggccctta tgttcagggc gttgatttag gcagcatggt cttcacctcc gggcaaattc
     6061 cggtttgccc gcagaccggt gagatcccgg ctgatgtgca agatcaggcg cgtttaagcc
     6121 tcgaaaacgt caaagcgatc gtggttgctg ccgggctgag cgtgggcgat atcatcaaga
     6181 tgaccgtgtt catcaccgat ctgaatgatt ttgccaccat caatgaagtc tataagcagt
     6241 tcttcgatga gcatcaggcg acctacccga cccggagctg tgtgcaggtt gcgcgtttgc
     6301 cgaaagatgt gaagctggaa attgaagcta tcgcagtacg tagtgcgtaa agcctcgtga
     6361 gcgggacggt cgcaaggtcg ttccgctcca cttcactgaa cggcaatccg agggtgtgga
     6421 tatgattagt gcattcgata ttttcaaaat tgggattggt ccctccagtt cgcataccgt
     6481 ggggccaatg aatgccggaa aaagttttat tgatcggctg gaaagtagcg gcttattaac
     6541 cgcgacgagc catattgtgg tcgatctgta tgggtcgttg tcactgacgg gcaaaggcca
     6601 tgccacggat gtcgccatta tcatgggact ggcaggaaac agtccgcagg atgttgtcat
     6661 tgatgagatc cctgcattta tagagttagt aacgcgcagc gggcggctgc cagtggcatc
     6721 tggtgcgcat attgttgatt ttcctgtagc aaagaacatt atcttccatc ccgaaatgtt
     6781 gcctcgccat gagaacggaa tgcggatcac tgcctggaag ggacaggaag cgctattaag
     6841 taaaacctat tactctgtcg gcggcgggtt tattgtcgaa gaagaacact tcggcctgtc
     6901 gcacgatgtc gaaacgtccg taccttacga tttccactca gcaggtgaac tgctgaaaat
     6961 gtgtgattac aacggcctgt ctatatctgg cctgatgatg cacaacgagc tggcgctgcg
     7021 cagcaaagcg gaaattgacg cagggtttgc ccgtatctgg caagtgatgc atgacggtat
     7081 tgaacgcggg atgaacactg aaggcgtgct gcctggtccg ctcaatgtgc cgcgtcgtgc
     7141 cgtagcgctg cgtcgtcagc tggtttctag cgataacatc tctaacgatc cgatgaatgt
     7201 catcgactgg atcaacatgt acgcgctggc ggttagtgaa gaaaacgcag ctggcgggcg
     7261 cgtggtaacg gcaccgacta acggtgcgtg cggcattatt ccggcagtgc tggcttatta
     7321 cgataagttc cgtcgtccgg taaacgagcg gtcaattgcc cgctattttc tggcagcggg
     7381 ggctattggc gcgctgtata aaatgaacgc ctccatctct ggcgcggagg tcggctgtca
     7441 gggggagatt ggcgtggcct gttcaatggc ggcggcaggg ttaactgaac tactgggcgg
     7501 cagtccggcg caggtatgca atgcggcgga aatcgcgatg gagcataacc ttgggctgac
     7561 ctgcgatccg gttgccggac aggtacaaat cccgtgcatt gaacgtaatg ccattaatgc
     7621 cgtgaaagca gtaaacgccg cgcggatggc gatgcgccgc acctcggcac cgcgtgtttc
     7681 actcgataaa gtgatcgaga cgatgtatga aaccggcaaa gatatgaacg ataaataccg
     7741 cgaaacatca cgcggaggac tggccattaa agtggtctgc ggctgacatt gctgtcagct
     7801 ttcatccttg ggtgcacaaa tgtgcacctt tttttgtgat ctgccgcaaa tagagaatga
     7861 atattctctt gcgattaatt tagtagaaaa ttcttatcca tctccgttat ttcaaagtct
     7921 tgattgtgaa gattttctct gacctcgcgc gtatcatttc tttattctaa taactcgcct
     7981 gcaaaaacgt agaccgcata tcgccttgat gcggctcgga aaaaaataat aagccctaca
     8041 aaatattgag cgagaaatta tggaaattgc atcgaataaa ggcgtcattg cagacgcttc
     8101 gaccccggcg ggtcgtgctg gaatgagtga gagcgagtgg cgagaagcga tcaaattcga
     8161 cagtactgac accggctggg tgattatgag tatcgggatg gcgattggcg cggggattgt
     8221 ttttctcccg gtgcaggtcg gtttgatggg attgtgggta tttttgctct catcggtgat
     8281 tggttacccg gcaatgtatc tgtttcagcg gttgtttatt aatacgctgg cagaatcacc
     8341 agaatgtaaa gattacccga gtgtcattag cggttattta ggtaaaaact ggggcatcct
     8401 gttaggtgcg ctctatttcg taatgctggt gatttggatg ttcgtctatt ccaccgccat
     8461 caccaacgat agtgcttcct atctgcatac cttcggcgtg acggaagggt tgctgtcaga
     8521 cagtcccttt tatggtctgg tactgatttg cattctggtg gcgatctctt cacgcggcga
     8581 gaaattgtta ttcaaaattt cgaccggcat ggtgctgacc aagctgctgg tggtcgcggc
     8641 gctgggcgtg tcgatggtgg gaatgtggca tctgtataac gtcggttcgc taccgccgct
     8701 ggggctgctg gtgaaaaacg ccattattac gctgccgttt accctgacgt cgattctgtt
     8761 tatccagacg ttaagcccga tggtgatctc ttatcgctcg cgggaaaaat caattgaagt
     8821 ggcgcggcat aaagcattgc gggcaatgaa tatcgcgttt ggcattttgt ttgtcaccgt
     8881 ctttttctac gccgtgtcgt tcacgctggc gatgggacat gacgaagcgg taaaagccta
     8941 tgagcagaat atttccgcgc tggcgattgc cgcacagttt attagcggtg acggcgcagc
     9001 gtgggtgaaa gtggtcagcg tcattctcaa tatctttgct gtcatgactg cattctttgg
     9061 cgtctattta ggctttcgcg aagcaacgca agggatcgta atgaacatcc tgcgtcgcaa
     9121 gatgcctgcc gagaagatta acgaaaatct tgttcagcgc ggcatcatga ttttcgccat
     9181 tttgctggcc tggagcgcca tcgtactgaa cgcaccggtg ttgagcttca cctctatctg
     9241 tagcccgatt ttcggcatgg tagggtgcct gatcccggcg tggctggttt acaaagtacc
     9301 ggcattgcac aaatacaaag ggatgtctct gtacctgatt atcgtcactg gtttgttgct
     9361 ttgtgtttct ccgttcctgg cattttcttg atttacctga aattttaagg tttttaatat
     9421 gtttgattcg actttaaatc cgttatggca gcgttacatc ctcgccgttc aggaggaagt
     9481 aaaaccggcg ctgggatgta ctgaaccgat ttcactggcg ctggcggcgg cggttgctgc
     9541 ggcagaactg gaaggtccgg ttgaacgtgt agaagcctgg gtttcgccaa atctgatgaa
     9601 gaacggtctg ggcgtcaccg ttcccggcac gggaatggtg gggctgccga ttgcggcggc
     9661 gctgggggcg ttaggtggaa atgccaacgc cgggctggaa gtgctgaaag acgcaactgc
     9721 gcaggcaatt gccgatgcca aagcactgct ggcggcgggg aaagtctccg ttaagatcca
     9781 ggaaccttgc aatgaaatcc tcttctcacg cgccaaagtc tggaacggtg agaagtgggc
     9841 gtgtgtcacc atcgtcggcg ggcataccaa cattgtgcat attgagacgc acaatggtgt
     9901 ggtgtttacc cagcaggcgt gtgtggcaga gggcgagcaa gagtctccgc tgacggtgct
     9961 ttccagaacg acgctggctg agatcctgaa gttcgtcaat gaagtcccgt ttgcggcgat
    10021 ccgctttatt ctcgattccg cgaagctaaa ttgtgcgtta tcgcaggaag gtttgagcgg
    10081 taagtggggg ctgcatattg gcgcgacgct ggaaaaacag tgcgagcgcg gtttgctggc
    10141 gaaagatctc tcttcatcca ttgtgattcg taccagcgcg gcatccgatg cgcgtatggg
    10201 cggcgctacg cttccggcta tgagtaactc cggctcgggt aaccagggga tcaccgcaac
    10261 aatgcctgtg gtggtggtag cagaacactt cggagcggat gatgaacggc tggcgcgtgc
    10321 gctgatgctt tctcatttga gcgcaattta catccataac cagttaccgc gtttgtctgc
    10381 gctgtgtgcc gcaacgaccg cagcaatggg ggccgccgcc gggatggcat ggctggtgga
    10441 tgggcgttat gaaaccatct cgatggcgat cagcagtatg atcggcgatg tcagcggcat
    10501 gatttgcgat ggtgcgtcga acagttgcgc gatgaaggtt tcgaccagtg cttcggctgc
    10561 gtggaaagcg gtgttaatgg cgctggatga taccgccgtg accggcaatg aagggatcgt
    10621 ggcgcatgat gttgagcagt cgattgccaa cctgtgtgcg ttagcaagcc attcgatgca
    10681 gcaaacggat cggcagatta tcgagattat ggcgagcaag gccagataaa cgccaggttt
    10741 tgggtatcgt gccggatgcg atgctggcgc accttatccg gcctacgggg tgctcaactt
    10801 gttgatgttg ttgtgttttg tacctgatgc cggatgcgat gctggcgcat cttatccggc
    10861 ctacgggttg tttaattcgt taatgttgtt ggattttgta ggccggataa ggcgttttcg
    10921 ccgcatccgg caacctgtct ttacgcggta gcttcatcct cggctaaacg cgtttcagca
    10981 tccgcgacga tggcttccag ctcgctcaac atctcttcat agccaaaatt tttggcggtg
    11041 cgagcaggtt ctttcgccac cacgggcttc actggctggc gctttttggc cgatttttta
    11101 ctcatcatca tctccctgta aaaacaacta gacaggcaaa tctatcagca aagcgcgcag
    11161 tggggaatcg gcaaccagcg taatgttagc ctcgtcacga ataaacgccc catcaccgca
    11221 ggtcagcgcc gctttctctt catgatgcgt aagcgcatga aatttcccgt gaatcgattg
    11281 caaatacgcg cgtggcccat gcaactggaa attcgcactt tcgcctttgt cgagcacgat
    11341 atggtgcagc cacacttgct ggcgtaattg caggcttccc atcgtaccct ctggcgaggc
    11401 gattaattgc tgcttgccca tattaagcgc cagtttttga atcagcggat tctctcgctg
    11461 cgggcaggcg tccagccaaa gctgcattcg tgttaacggt ttgtctttgc tgagattgtg
    11521 ttcgctgtag ctgacacccg gctgggtaga gagcagcaac gcctcaccgg cgctggcctg
    11581 aacatgattg ccttcgctgt cgcgatactc tgcttctcca tccagaatca catttaaaat
    11641 atcgactttg ggataggttc gcggctgaaa ggcggcacct ggggccagca cttcctggtt
    11701 aagcacacgc agggaggcat agcctaacaa tttcgggtcg aagtagtgtc caaaggaaaa
    11761 agtataccgg gcctgcaacc atccgtagtc tgcttgtcca cactgtctgg cagttcgggt
    11821 agtaatcata attcttgacc tctctttact tccttttatg gtaaggggct ggacgctaca
    11881 ttgttagcca gatattctgc ccggtatgtt caaatttcct gaatgagaac gaaatggcca
    11941 aagaaagggc attaacgctg gaagcactac gggttatgga tgcgatcgat cgccggggca
    12001 gttttgcggc ggcggcggat gagctgggac gcgtgccttc cgcacttagc tacaccatgc
    12061 aaaaactgga agaagagctg gatgtggtgc tgtttgaccg ctcgggccat cgcaccaaat
    12121 tcaccaatgt cgggaggatg ttgctggagc gagggcgcgt tttgctggaa gccgcagata
    12181 aactgactac cgatgcggaa gccctcgcgc gcggttggga aacgcatctc accattgtga
    12241 ccgaggcgct ggtaccgaca cctgcctttt tcccgttaat cgacaaactg gcggcaaaag
    12301 ccaataccca actggcaatc atcaccgaag tgctggcggg ggcgtgggaa cgactggagc
    12361 aggggcgggc ggatatcgtt atcgcgccgg atatgcattt tcgttcctcg tcggagatca
    12421 actcgcgcaa gctctatacc ttaatgaacg tctacgttgc cgcgcctgat cacccgattc
    12481 atcaggagcc ggaaccgtta tctgaagtga cgcgcgtgaa atatcgtgga attgcggtag
    12541 cggataccgc tcgtgagcgc ccggtgttga ccgtacagct gctggacaaa cagccgcgct
    12601 taacggtgag cacgattgaa gataaacgtc aggcattact ggcggggctt ggcgtggcga
    12661 cgatgccgta tccgatggtc gaaaaagata ttgcggaagg gcggttgcgt gtcgtcagcc
    12721 cggaatcgac cagcgagatc gatattatta tggcctggcg tcgtgacagt atgggggaag
    12781 cgaaatcctg gtgtctgcgg gaaattccca aactttttag cggaaaataa tatttgttat
    12841 tattaataaa aaggggcgaa atgtcgcccc aattctaaga ttaatttgaa ccaaacttag
    12901 gatcgtttcc gtaacgattg ctgccagaat tgccttctaa acaggcaaat acaaacagaa
    12961 ctaaccagcc aatgatcggt accagataga gaagcgccca cgcacctgaa cggtcagtat
    13021 cgtgcagacg acgaacacac agagcaatga ccggaatgat tgttgctgcc aggtaaatga
    13081 gagaaaggaa tggaaactct aaacctaaaa tcaattgaat gacattgata atagcgccga
    13141 cgatggcgtt aatcagagta aacatccagt actctttacg acgtgcgcga ccagagaaac
    13201 caacataatt ttttaatacg gctaaatacc actgcataaa aacatccctt taattaaaag
    13261 tgacgaaagt ctattccggg tattgtgtaa atgctat
//
LOCUS       DAPGWB010000120        13191 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.121, whole genome shotgun sequence.
ACCESSION   DAPGWB010000120 DAPGWB010000000
VERSION     DAPGWB010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13191
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.121"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..653
                     /locus_tag="RHX79_003386"
     CDS             <1..653
                     /locus_tag="RHX79_003386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HDV2198521.1"
                     /translation="ADGTLNACSAMHVQFYNAAMNRANIKNTFLDYSNFYMAYMAEVN
                     LYKVIAPYVNLFKADLSFSKLDLINFEHADLSRVNLNKAILQNINLIDSKLFCTWLTN
                     TFLEMVICTGSNMANVNFNNANLSNCHFNCSILTKACMFNTRLYRVNFDEASVQGMGI
                     SILRGEENIPIDSDTLVTLQKFFEEDCTSHTGMSQTEDNINAVAMKITADIMQHAD"
     gene            complement(807..2456)
                     /locus_tag="RHX79_003387"
     CDS             complement(807..2456)
                     /locus_tag="RHX79_003387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HDV2198522.1"
                     /translation="MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWP
                     TFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGF
                     LIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGL
                     VSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEP
                     ATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWA
                     MLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTDIILIYAALMLVRFGW
                     LWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFP
                     ARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAI
                     QKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAA
                     LRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ"
     gene            complement(2607..3956)
                     /gene="ghxP"
                     /locus_tag="RHX79_003388"
                     /gene_synonym="yjcD"
     CDS             complement(2607..3956)
                     /gene="ghxP"
                     /locus_tag="RHX79_003388"
                     /gene_synonym="yjcD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanine/hypoxanthine transporter GhxP"
                     /protein_id="HDV2198523.1"
                     /translation="MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVI
                     VVPGMLGKAGFPPAAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLG
                     QHISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANG
                     VGLVIKNPLDGLPVALGDFATFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGL
                     IFDPNVHFSGVFAMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTI
                     RAVAGQANLLDKDGQIIDGGKALTTDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTG
                     LTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVAKIDFADFVDAMAGL
                     VTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIGTVVIAVALVTFYAGGWAI"
     gene            complement(4502..4966)
                     /gene="soxR"
                     /locus_tag="RHX79_003389"
     CDS             complement(4502..4966)
                     /gene="soxR"
                     /locus_tag="RHX79_003389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HDV2198524.1"
                     /translation="MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSG
                     NQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREEL
                     DRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN"
     gene            5052..5375
                     /gene="soxS"
                     /locus_tag="RHX79_003390"
     CDS             5052..5375
                     /gene="soxS"
                     /locus_tag="RHX79_003390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide response transcriptional regulator
                     SoxS"
                     /protein_id="HDV2198525.1"
                     /translation="MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRT
                     VTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSD
                     YRHRL"
     gene            complement(5378..6964)
                     /gene="pdeC"
                     /locus_tag="RHX79_003391"
     CDS             complement(5378..6964)
                     /gene="pdeC"
                     /locus_tag="RHX79_003391"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HDV2198526.1"
                     /translation="MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRT
                     FAQLALDKSELVIRQADLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDN
                     HFLCSSLIAPVNGYTIAPADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPL
                     FWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVY
                     STKRPIAAIVATSYQRLITHFYNHLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQ
                     RALEKHQLCLYYQPIIDIKTEKCIGAEALLRWPGEQGQIMNPAEFIPLAEKEGMIEQI
                     TDYVIDNVFRDLGDYLATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKF
                     EVTEHAFLDVEKMTPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVE
                     TLTTHKTSHLIAEHIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKAMP
                     PQVFMQWMEQLPARELTRGQ"
     gene            7394..7675
                     /locus_tag="RHX79_003392"
     CDS             7394..7675
                     /locus_tag="RHX79_003392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjcB family protein"
                     /protein_id="HDV2198527.1"
                     /translation="MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISS
                     GLGVVSACWFAMGLLGITMADITAIWHNIELVMIEEMNQTPPQWPMILT"
     gene            complement(7774..8310)
                     /gene="ssb1"
                     /locus_tag="RHX79_003393"
     CDS             complement(7774..8310)
                     /gene="ssb1"
                     /locus_tag="RHX79_003393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein SSB1"
                     /protein_id="HDV2198528.1"
                     /translation="MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDK
                     ATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEV
                     VVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSA
                     PAAPSNEPPMDFDDDIPF"
     gene            8564..11386
                     /gene="uvrA"
                     /locus_tag="RHX79_003394"
     CDS             8564..11386
                     /gene="uvrA"
                     /locus_tag="RHX79_003394"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDV2198529.1"
                     /translation="MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG
                     EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA
                     ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA
                     CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEA
                     PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA
                     VREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG
                     QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV
                     MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV
                     HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK
                     DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF
                     DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC
                     EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE
                     FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL
                     DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE
                     ILVSGTPETVAECEASHTARFLKPML"
     gene            complement(11421..11777)
                     /locus_tag="RHX79_003395"
     CDS             complement(11421..11777)
                     /locus_tag="RHX79_003395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HDV2198530.1"
                     /translation="MTISELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVEN
                     RPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQ
                     AVNLLPEEKRKLLVQL"
     gene            complement(11781..12197)
                     /locus_tag="RHX79_003396"
     CDS             complement(11781..12197)
                     /locus_tag="RHX79_003396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbQ family protein"
                     /protein_id="HDV2198531.1"
                     /translation="MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQH
                     TSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVL
                     PLHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE"
     gene            complement(12308..13021)
                     /gene="aphA"
                     /locus_tag="RHX79_003397"
     CDS             complement(12308..13021)
                     /gene="aphA"
                     /locus_tag="RHX79_003397"
                     /EC_number="3.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid phosphatase AphA"
                     /protein_id="HDV2198532.1"
                     /translation="MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQA
                     PIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFW
                     EKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPVT
                     NMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTY
                     KPLPQAGAFGEEVIVNSEY"
BASE COUNT         3408 a         3451 c         3232 g         3100 t
ORIGIN      
        1 tggccgacgg aactctaaat gcatgctccg ctatgcatgt tcaattctac aatgcagcaa
       61 tgaatagagc caatattaaa aacaccttcc ttgactattc aaatttttat atggcgtaca
      121 tggctgaggt aaatctttat aaagtaatag cgccatatgt taatttattt aaagccgacc
      181 ttagtttctc taaactcgat ttaattaact ttgaacatgc tgatctgtct cgcgtcaatc
      241 tgaacaaagc aatcctccag aatataaact taattgatag caaactcttt tgtacgtggc
      301 tgacaaatac attcctcgaa atggttatat gtaccggctc taatatggct aatgttaatt
      361 ttaataatgc caatttaagc aactgccatt tcaactgttc tattttaaca aaagcctgta
      421 tgtttaatac ccgtctctat cgggttaatt ttgatgaggc tagcgtccag ggaatgggca
      481 tttccattct ccgtggggag gaaaatatcc ccattgatag tgataccctg gtaacactac
      541 agaaattctt tgaagaagat tgtacctctc atactggcat gtcacaaact gaggataata
      601 ttaatgcagt cgctatgaag attactgcag atattatgca acacgcagat tgaggttaag
      661 tcgaagaaca gccaatgaat tgactttaca agagagataa cttatttgtt ttagaatcat
      721 gaatgttagc ccgagctaac ctgttaaagg tgcaaaagat tgcacctttt tcagattacc
      781 tcgggcctgg ttacgtcgct ttcggcttac tgattttcct caattagcaa cgcttcaagc
      841 aaatcgagat cgtgcagtaa tttttgcagc gtttcgttgc tgatctcccg cgtggcgcgc
      901 aggtggtaaa gttcagcacg ttcagaacgc aatgccgcca gacggaagcg acgctcaagg
      961 ttctcttcct gcacggaact ttcaacgtcg ttacgtccat cggcgcgacg acgcaggtta
     1021 ccaatgacgc gagaactgac ctccgtaagc agctggttat cgatattctc ttcggtatcc
     1081 gccgccagac gctcctccat tttctggatc gccacaatcg ccacttctgc cgttgccgct
     1141 cgcgcaatac gttcctcttt caattgttgc gaatgatccg cgacttcaat gtgttgtagc
     1201 agaataggca acatcaccac gccgacaaac agcgagaaga gaatgacgcc agccgccagg
     1261 aacaccagct catagcgcgc cgggaagacg ttaccatccg gcaagagcag cgggatagag
     1321 agcacaccgg ccagagtgat cgccccacgc accccagcga aagacgcgat caggatttct
     1381 cgtgtggtcc acgaaccaaa ctccatcggc ttcttcttca ggaagcggtt gctgaacttt
     1441 ttcatcgtcc acagccagcc gaaacggacc agcatcagcg ccgcatatat cagaataata
     1501 tcggtaaaca gcatccagat ttcgacgtta gggtcgattt ctgccgccat cagcgacgtc
     1561 tccagaatac ccggtagctg cagacctaac agcaggaaca ccatgccgtt aaagacaaat
     1621 tccagcatcg cccaggtgct gtttgcacgc aggcgcattg ccagcggcgc acggcgcatc
     1681 acaccggagc gggtgatggt catcccggcg gcaaccgcag cgaggatgcc ggaaacgcca
     1741 atatgttcgg caatcagata agaagcgaat ggcagcagga acagcaggac gatctgcgtc
     1801 gcgggttcat caccgcccca gcggctgagg aatcgcagcg agcgaccgta cagccagcta
     1861 accacaaaac cggcgagaat accgccaatg gctactttca taaattcgac cgtcgcaccg
     1921 ccgacggtga agatcatcgt ccccatcgcc actgccacgg caaacttcaa cgataccagg
     1981 ccggaggcgt cattcatcaa cgcttcgccc tgcaaaatac ccatgatttt tttcgggatg
     2041 cgcccttcgc caacaatccc ggagagcgcc acagcatcgg tcggagaaag taccgccgcc
     2101 agcgcaaagg cggggatcag cggaatgccc ggcaccaccc agtaaataag gaagccaatg
     2161 ccgaccacgg tgaccaccac cagcgccagc gcgaggccga aaatctctcg accatgttcg
     2221 agaaattcac gggtcggcgt tttccagcca tcagcgaaca gcaacggcgg gataaacaag
     2281 actaaaaaga gttcaggatc aaactccaca tgcaaaccaa acgtcggcca cgccagtagc
     2341 gcaccgatgg cgatttgcat aagcggaagc gggatctgaa agggcatgac acgagtgacc
     2401 accccggaca gcgagaccac gagggtcatt atcagtatgg tgaagaagat ttccatgcgt
     2461 tccctgtttg cgatgttttt tatgatctga gaaagacgtt atgcctgaat tctcattttt
     2521 tcagaatatc gcaaaagctc acacaatgtg cggagaaaat aaaaacgggc agccattgcc
     2581 acccgttttc agaatccgat gaaagattag atagcccagc cacccgcata gaaggtcacc
     2641 agcgccacgg cgataacgac cgtaccgatg ttcaacttgc gccattcgcc ggaaaccaga
     2701 cgaccaatca ccagagtcgc gaagccgatc atgatgcctg ttacgatgtt acaggtcagc
     2761 acgatgaata ccgccgtaac cagacccgcc atcgcatcaa caaaatcagc aaagtcgatt
     2821 ttcgccacgt tgctcagcat cagcaggcca acgtacatca gcgccggagc cgttgcatac
     2881 cccggaacga ggtaagagag cggagagagg aacagaatca gcaggaacag cacgccaacg
     2941 gtgatagccg tcaaaccggt tttaccgccc gccgccgtac ccgccgcaga ctcgatgtat
     3001 accgctgccg gagctgcacc caccaggcca gagaaaacgc tgctcatgga gtcagtggtc
     3061 agtgctttcc caccgtcgat gatctgccca tctttatcca gcaggttcgc ctggccggcg
     3121 acggcacgga tagttccggt ggcatcaaat actgccgtca ttaccagcgc cagaacgctt
     3181 ggcaggacta caggattcag cgcgcccata atgtccaggc tgccaatcag tgagttgccg
     3241 ttttcatcgc tcaatgaagg catggcgaaa acgccggaga aatggacgtt aggatcgaag
     3301 atcaaaccga caattgagat accgataatg gtcagcagaa tgccaccagg gactttcagt
     3361 ttttccaggc cgatgatcac cgccagacct accagtgaca taatcaccgg gaaggtcgcg
     3421 aaatcaccca gcgcaacggg cagaccatca agcgggtttt taatcaccag accgacaccg
     3481 ttagcggcaa tgagcagcag gaacagaccg ataccaatcc ccgtgccgtg cgccacaccg
     3541 tgcggcaagt tgcgcaaaat ccagctacgg atacccgtgg cagaaattac cgtaaacagc
     3601 acacccatca ggaacacggc acccagcgcg acaggtacgc taatatgttg ccccagcacc
     3661 aggctgaatg cggtaaatgc cgtcagggag atggcgcaac caatcgccaa cggcagatta
     3721 gcccacagac ccatcacgat agaaccgagt ccggcaacca gacaggttgc aacgaaaact
     3781 gccgcaggcg ggaagcctgc tttacccaac atacctggaa cgacgatgac cgagtagacc
     3841 atcgccagaa acgttgttaa cccggcaacc acttcctgac ggacagtgct tccacgttgt
     3901 gaaattttaa accaggcgtc gagtgaaccg ccggtacgcg ctgatggcgt agacataaga
     3961 aaacatcccc tgagagttta attttcgtca agatgcgtgg cggacaatcc cctgccagcg
     4021 aaacgttatc ttcctgctcc aggtttgcga caatttgctg cgtcgcaaaa aagcaaacgt
     4081 ttagctccgc gcatacaaaa cgggtggtaa aaaaagcaaa cgattatccg gcgatcatag
     4141 cggctttttc aaccgaagtt tgctgctttt ttctctttta ttgtcttgac gatgaaaaac
     4201 caggcaattg atgcgcaaac gttatcgtcg gtgcgcaaga ttgcagcgtt atcgagccgt
     4261 ataccgttca ggattgcgat aaaaaatcgt ctgagatgac aaaaatattg cggttaaaaa
     4321 gtatactttt acactggcga agaaacgtcg gtgacataca attaaagcat caacaccaac
     4381 cggaacctcc accacgtgct cgaatgaggt gtgttgacgt cgggggaaac cctcctgtgt
     4441 accagcggga tagagagaaa gacaaagacc ggaaaacaaa ctaaagcgcc cttgtggcgc
     4501 tttagttttg ttcatcttcc agcaagcgtg cgccggtacc ttcttctcct aagcggtcgc
     4561 ccgggttacg caacgggcaa tcactgcgcg aaaggcagcc acaaccaata catccgtcca
     4621 gttcgtcacg cagcgctact aaggtatgaa tgcgccgatc caactcttct cgccattggg
     4681 acgaaagctg tttccactct ttcgcactta acgtatgccc ttcgggcaac acgccaaacg
     4741 cttcaccaat ggtcgccagc ggaatgccaa tacgctgagc aattttgata attgcaacat
     4801 atcgcaacac atcacgttta tatcgccgct gattgccgct gttacggata ctggtaatca
     4861 accctttact ttcatagaaa tgcagcgccg ataccgccac accgctgcgt ttcgccactt
     4921 cgccgggggt tagcagcgct ttaatgcggg gtaatttctt ttccataaat cgctttacct
     4981 caagttaact tgaggaatta tactccccaa cagatgaatt aacgaactga acactgaaaa
     5041 gaggcagatt tatgtcccat cagaaaatta ttcaggatct tatcgcatgg attgacgagc
     5101 atattgacca gccgcttaac attgatgtag tcgcaaaaaa atcaggctat tcaaagtggt
     5161 acttgcaacg aatgttccgc acggtgacgc atcagacgct tggcgattac attcgccaac
     5221 gtcgcctgtt actggccgcc gttgagttgc gcaccaccga gcgtccgatt tttgatatcg
     5281 caatggacct gggttatgtc tcgcagcaga ccttctcccg cgttttccgt cggcagtttg
     5341 atcgcactcc cagcgattat cgccaccgcc tgtagtttta ttgcccgcgc gttaactccc
     5401 gcgcgggtaa ttgctccatc cattgcataa acacctgcgg cggcatcgcc ttcgcaaaaa
     5461 accatccctg gcaatagcgc acgccgcgtt tgcgcagcca gttaacctgc tcctcagttt
     5521 cgacgccttc agcgatcgtt tttaacccca ggctgtgcgc cagctcgatg atgtgttccg
     5581 caatcaaatg actggttttg tgggtggtca gcgtttcaac aaacgatttg tcgattttca
     5641 aaatatcgac attcaatgat ttaaggttat gcaagttaga gtagccaata ccaaaatcat
     5701 caattgccac ttcgtaacca gcctggcgga aagccagaat aatcggcgtc attttttcga
     5761 catcaagaaa tgcatgctca gtcacttcaa atttaatttg ctgcggacgc accgcgtatt
     5821 gctctgtttt ctgattgatt cgcgctatca accgtgacgt atgaaaatcg gaggccgaca
     5881 ggttaataga aacatagcga tctgcatgtg ttgccaggta atcgcccaga tcgcggaaga
     5941 cattatcaat aacataatca gttatctgtt ctatcatccc ctccttttct gccagcggaa
     6001 taaactctgc cggattcatt atttgcccct gctcaccagg ccaacgtaac aacgcttcag
     6061 cgccgataca tttttctgtt ttgatatcga ttattggctg gtaataaaga caaagttgat
     6121 gtttttcgag ggcgcgttgc aatttacgtt tgggagataa atagttttgt cgaatacgta
     6181 gccagagtaa tagcagaaca agactcccca aaataccggc gggcaacgca aaaataagat
     6241 gattataaaa atgggttata agacgttgat atgaagtcgc aacaatggct gcaattgggc
     6301 gttttgtcga ataaactgtc gcatataaat agccatttct ttgtacggtt aaatccttca
     6361 aatgaatcag cggagaaaac gttgctgccg aggcctcttt gcttaacgag aaaaaggttt
     6421 tcgtcaccgt atcatacaca ccccattgca atgtcggatc atcagacatc acttcactcc
     6481 agaagagagg gttgataacc gccacataat ttccccgctg catataggtc attttatagc
     6541 cagagaaaaa aggcgtatcg cggtaataat agatagaaac gttaggttca cgcttataat
     6601 cggccggtgc aatcgtatag ccgtttacag gcgctatcag cgatgagcat aaaaaatggt
     6661 tatcacgggc atagatcaat tcattaatat aaagatagcc acgaataata ttcaacattc
     6721 gcttttgatg ggctggagtg caaacttgcc cctgatagcg ttcagctgca tcgctcacta
     6781 aatctgcctg gcgaatgacc agctcggatt tatccagtgc cagttgagca aaggttcgga
     6841 gctgattatt cacttctgat tttgcccaaa ggaaggcaat ccatagcgaa agaatgatgg
     6901 gaaagagaac taaaaagata atgcccggca acgccagtaa ttggtgtcgt gcacgatgac
     6961 tcattgctat caatttcctg cctgtttata cccggccatt gcaaggtgaa aaccctgggt
     7021 accgacgtct ttagataaat cttacggtat aaatagcact tttgcctgat ttgaaattga
     7081 tacctttcta atcgtcacct ggatgaaaat aattcattga tattcaaaat taatttccta
     7141 caggaatgca gaggcggcgg gaagatatgc ccttaatgcc actgaaaaac cacataatct
     7201 gtacagcaat aaaagtcacg gcctaatatg gctaacaaac aatcaattgt gatatagttc
     7261 acaaaattaa tgaaacaaac agagtgtttc atttttgtgt tctgcaagcc ccgcgatagc
     7321 cagagtgtac cacgcctccc gtgaacaacg ccgcgctgtc cagggcatcg gctcttttca
     7381 gaggaattgt ttgatggcta ccctcaccac tggcgtggtt cttcttcgct ggcaacttct
     7441 tagtgccgta atgatgtttc tggccagcac actcaacatc cgttttcgtc ggtctgatta
     7501 tgtcgggctt gcggtgatca gcagcggtct gggcgttgtt tccgcctgtt ggttcgcaat
     7561 ggggttgctt ggcatcacaa tggcggacat caccgctatc tggcacaaca tcgagttggt
     7621 gatgatagaa gagatgaatc agacaccgcc acaatggcca atgattttga cctgatacgt
     7681 agaagcctcc ataacggagg cttctttttt atggctggca gatgctttaa tcatccacct
     7741 taaaacaata taacctattg ttttaatgac aaatcagaac ggaatgtcat catcaaagtc
     7801 catcggcggc tcgttagacg gcgctgccgg agcggactgc tgcgggcgag actgcgcgcc
     7861 gccgctgaac tgattgccac cctgcggctg ctgaggctga ccccaaccgc cctgcggctg
     7921 accaccaccg atattaccac ctgccggagc gccaccaccc tgacgaccac ccagcatctg
     7981 catggtgccg ccaacgttca ccacgacttc tgtggtgtag cgatcctgac cggattgatc
     8041 ggtccattta cgggtacgca gctgaccttc gatataaacc tgagaacctt tacgcagata
     8101 ttcgctggcc acttctgcca gtttgccgaa cagcacaacg cggtgccatt cagtctgttc
     8161 tttcatctcg ccggtcgctt tatcacgcca ggattcggaa gtagccagcg taatgttggc
     8221 aactgcgcca ccatttggca tgtagcgtac ttccgggtcc tgacccagat taccaacgag
     8281 aataaccttg tttacgcctc tgctggccat gttcgtgtct cctgaaaaaa atcgttctga
     8341 ataagtgtaa acgcgcgatt gtaccattac caatagcgct tttactatgt tgtgacctcg
     8401 gttccgggaa acaaacctgg ccagacattg ttacacaaca ctccgggtaa tgcattccaa
     8461 tactgtatat tcattcaggt caatttgtgt cataattaac cgtttgtgat cgccggtagc
     8521 accatgccac cgggcaaaaa agcgtttaat ccgggaaagg tgaatggata agatcgaagt
     8581 tcggggcgcc cgcacccata atctcaaaaa catcaacctc gttatccccc gcgacaagct
     8641 cattgtcgtg accgggcttt cgggttctgg caaatcctcg ctcgctttcg acaccttata
     8701 tgccgaaggg cagcgccgtt acgttgaatc cctttccgcc tacgcgcggc agtttctgtc
     8761 actgatggaa aagccggacg tcgatcatat tgaggggctt tctcctgcca tctcaattga
     8821 gcagaaatcg acgtctcata acccgcgttc tacggtgggg acaatcaccg aaatccacga
     8881 ctatttgcgt ttgttgttcg cccgcgtcgg cgaaccgcgc tgtccggacc acgacgtccc
     8941 gctggcggcg caaaccgtca gccagatggt ggataacgtg ctgtcgcagc cggaaggcaa
     9001 gcgtctgatg ctgctcgcgc caatcattaa agagcgcaaa ggcgaacaca ccaaaacgct
     9061 ggagaacctg gcaagccagg gttacatccg tgctcgtatt gatggcgaag tctgcgatct
     9121 ttccgatccg ccgaaactgg aactgcaaaa gaaacatacc attgaagtgg tggttgatcg
     9181 cttcaaggtg cgtgacgatc ttacccaacg tcttgcggag tcgtttgaaa ccgcgctgga
     9241 gctttccggt ggtacagcgg tagtggcgga tatggacgac ccgaaagcgg aagagctgct
     9301 gttctccgcc aacttcgcct gcccaatttg cggctacagt atgcgtgaac tggagccgcg
     9361 actgttttcg tttaacaacc cggcaggtgc ctgcccaacc tgtgacggcc ttggcgtaca
     9421 gcaatatttc gatcctgacc gcgtgatcca aaaccccgag ctgtcactgg ctggcggtgc
     9481 gatccgtggc tgggatcgcc gcaacttcta ttacttccag atgctgaaat cgctggcaga
     9541 tcactataag ttcgacgtcg aagcgccgtg gggcagcctg agcgcgaacg tgcataaagt
     9601 ggtgttgtac ggttctggca aagaaaacat tgaattcaaa tacatgaacg atcgtggcga
     9661 tacctccatc cgtcgtcatc cgttcgaagg cgtgctgcac aatatggagc gccgttataa
     9721 agagacagaa tccagtgcgg tacgtgaaga attagccaag tttatcagca atcgcccatg
     9781 cgccagctgc gaagggacgc gtctgcgtcg ggaagcgcgc cacgtttatg tcgagaatac
     9841 gccgctgcct gctatctccg acatgagcat cggtcatgcg atggaattct tcaacaatct
     9901 caaactcgct ggtcaacggg cgaagattgc ggaaaaaatc cttaaagaga tcggcgatcg
     9961 tttgaaattc ctcgttaacg tcggcctgaa ttacctgacg ctttcccgct cggcagaaac
    10021 gctttccggc ggtgaagccc agcgtatccg tctggcgagc cagattggtg cgggcctggt
    10081 tggcgttatg tacgtgctgg acgagccatc tatcggcctg caccagcgcg ataacgagcg
    10141 cctgttgggt acgcttatcc atctgcgcga tctcggtaat accgtgattg tggtggagca
    10201 cgacgaagac gcaattcgcg ccgctgacca tgtgatcgac attggcccgg gcgcaggtgt
    10261 tcacggcggt gaagtggtcg cagaaggtcc gctggaagcg attatggcgg tgccggagtc
    10321 gttgaccggg cagtacatga gcggcaaacg caagattgaa gtgccgaaga aacgcgttcc
    10381 ggcgaatccg gaaaaagtgc tgaagctgac aggcgcacgc ggcaacaacc tgaaggacgt
    10441 gacgctgacg ctgccggtgg gtctgtttac ctgcatcacc ggggtttcag gttccggtaa
    10501 atcgacgctg attaacgaca cactgttccc gattgcccaa cgccagttga atggtgcgac
    10561 catcgccgaa ccggcaccgt atcgcgatat tcaggggctg gagcatttcg ataaagtgat
    10621 cgatatcgac caaagcccaa ttggtcgtac tccacgttct aacccggcga cctataccgg
    10681 cgtgtttaca cctgtgcgcg aactgtttgc gggcgtaccg gaatcccgtg cgcgtggtta
    10741 tacgccagga cgtttcagct ttaacgtccg tggcgggcgc tgcgaagcct gtcagggcga
    10801 cggtgtgatc aaagtggaga tgcacttcct gccggatatc tacgtgccgt gcgatcagtg
    10861 caaaggtaaa cgctataacc gtgaaacgct ggaaattaag tacaaaggca aaaccatcca
    10921 cgaagtgctg gatatgacca tcgaagaggc gcgtgagttc tttgatgcgg tgccagctct
    10981 ggcgcgtaag ctgcaaacgt tgatggacgt tggtctgacg tacattcgcc tggggcagtc
    11041 cgcaaccaca ctttctggtg gtgaagccca gcgcgtgaag ctggcgcgtg agctgtcaaa
    11101 acgcggcacc gggcagacgc tgtatattct cgacgagccg accaccggtc tgcacttcgc
    11161 cgatattcag caactcctcg acgtgctgca taaactgcgc gatcagggca ataccattgt
    11221 ggtgattgag cacaatctcg acgtgatcaa aaccgctgac tggattgtcg acctgggacc
    11281 agaaggcggc agtggcggcg gcgaaatcct cgtctccggt acgccagaaa ccgtcgcgga
    11341 gtgcgaagct tcgcatacgg cacgcttcct caagccgatg ctgtaatcgt taaggccgct
    11401 ttctgagcgg ccttttcctt tcagagttgt accagcaatt tacgcttttc ttccggtagt
    11461 aaattcactg cctgctgata agacgcatcc accagataat agatttgcga atccggcagc
    11521 gaaccgtcga gatacacggt gctccagtgc gctttattca gatggcggct aggacgcaca
    11581 tcgctgtgct gctgacgtag cagctccgcc agctccgggc tggttttcag cgaaacagct
    11641 gggcgatttt ctacttcttt caccatcgca aacagtacat cttccacttt gatctgcgtc
    11701 gctttccagt cgttatgcac gctctgttct gcgcctggtt ttgccatgca atattgtagc
    11761 aactccgaaa tggtcatttt ttactcccct tgtagtgtcg cgatgatgcg acgcgatccg
    11821 ccgtggatgc gatgttcccc cagccagatg ccttgccagg tgccggtctg aatacgccct
    11881 ttatgtaacg gcaatacaag cgatgttccc agcattgagg atttgatatg agaaggcata
    11941 tcgtctgctc cctcatagtc atgctcataa tttccgttgt cgggaacggt gcggaggaaa
    12001 aaacgctcca tgtcgtggcg tacggtggga tcgcagttct cattaagtgt cagagaggcg
    12061 gaggtatgtt gcagcaacag atgcagtaag ccgatgttaa cgcgcggcat atcagccagc
    12121 tgattcagaa tttcatccgt taccagatga aacccacgag atttggcgct aagcgtgagc
    12181 gtcttttgat accacatgtg ctgctccttg ataaaactct cttaatcagt ttgcagcaag
    12241 acagcgaaag gataaaggtg tgattaaaaa aacagcattc gggagagcgt cacgctctcc
    12301 cgctctgtca gtattctgaa ttgacgatca cctcttcacc aaacgcaccc gcttgtggca
    12361 agggtttgta ggtagagttg gaggcgcgca gaatgcggat accacgagcg ccgacatcgc
    12421 gtgcggcggt aatatcgtta tcggaatcgc cataaaaaat tcggatattt ttatcctgca
    12481 gccattgcga ttttgtattt tgccctggtt tatcgcccgc aaagatcacc ggattcatgt
    12541 tggtgacagg aatatgaaaa ttatccgcca gcgtttttga aaccgtttct gttttcgtcg
    12601 ggctacgacc agtcacaaag aagatcgcgt caccgcggcg tacatgcata tcaatcagct
    12661 ggcgagcgac ctcttttgga atgctgaatt catcccagcc attgttcatt ttttcccaga
    12721 acacaggatt tttcagataa tcttcgcttt ctggtgagaa ggtttttttg ccgcgccaga
    12781 agcccgggct ggaaaaaagt accgtgtcat cgatatcaaa ccccaccgcc attggcggac
    12841 gccctgcgag gctattttca atttgtgcga ccgaaaccca atgaattggt gcctgttcag
    12901 caagcctggc aacgttagtc ccagggttaa gcggtgaagg agatgaggcc agggcaacag
    12961 cggaactgtt tagagcgaac aataagcaaa cggcactgat tgcctgtgtg atcttgcgca
    13021 tatttttccc taaatagtca gtatgttgaa actttttatt gtgagatttg ttgcaaaaac
    13081 catctgacca taacgccagc tgccggggaa aggaaggatt atctgcggtt tttgtgatga
    13141 aaagcaggat gattatgttt aacccagtaa atacgttcct gtcttttttt g
//
LOCUS       DAPGWB010000121        13162 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.122, whole genome shotgun sequence.
ACCESSION   DAPGWB010000121 DAPGWB010000000
VERSION     DAPGWB010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13162
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.122"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(158..370)
                     /gene="cspH"
                     /locus_tag="RHX79_003398"
     CDS             complement(158..370)
                     /gene="cspH"
                     /locus_tag="RHX79_003398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspH"
                     /protein_id="HDV2198533.1"
                     /translation="MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEV
                     LIPGLRVEFCRVNGLRGPTAANVYLS"
     gene            656..868
                     /gene="cspG"
                     /locus_tag="RHX79_003399"
     CDS             656..868
                     /gene="cspG"
                     /locus_tag="RHX79_003399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspG"
                     /protein_id="HDV2198534.1"
                     /translation="MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT
                     LNENQKVEFSIEQGQRGPAAANVVTL"
     gene            879..1067
                     /locus_tag="RHX79_003400"
     CDS             879..1067
                     /locus_tag="RHX79_003400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDV2198535.1"
                     /translation="MTQHLHFRCPCCHGSQYRTSAFDVTERNPLGAKCIFCKSTMITF
                     DNVALQIRTDHAPLDFTK"
     gene            1042..1272
                     /gene="ymcE"
                     /locus_tag="RHX79_003401"
     CDS             1042..1272
                     /gene="ymcE"
                     /locus_tag="RHX79_003401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YmcE"
                     /protein_id="HDV2198536.1"
                     /translation="MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGEM
                     AYNISYLTRVPGTNTLLACCCLSRPDEVNSEY"
     gene            1262..1435
                     /locus_tag="RHX79_003402"
     CDS             1262..1435
                     /locus_tag="RHX79_003402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module toxin, GnsA/GnsB family"
                     /protein_id="HDV2198537.1"
                     /translation="MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKM
                     TGLESYDVKIKIM"
     gene            complement(1484..2557)
                     /locus_tag="RHX79_003403"
     CDS             complement(1484..2557)
                     /locus_tag="RHX79_003403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDV2198538.1"
                     /translation="MAENKRTRWQRRPGTTGGKLPWNDWRNATTWRKATQLLLLAMNI
                     YIAITFWYWVRYYETASSTTFVARPGGIEGWLPIAGLMNLKYSLTTGQLPSVHVAAML
                     LLVAFIVISLLLKKAFCSWLCPVGTLSELIGDLGNKLFGRQCVLPRWLDIPLRGVNYL
                     LLSFFLYIALLMPAQAIHYFMLSPYSVVMDVKMLDFFRHMGTATLISVTVLLIASLFI
                     RHAWCRYLCPYGALMGVVSLLSPFKIRRNAESCIDCGKCAKNCPSRIPVDKLIQVRTV
                     ECTGCMTCVESCPVASTLTFSLQKPAANKKAFALSGWLMTLLVLGIMFAVIGYAMYAG
                     VWQSPVPEELYRRLIPQAPMIGH"
     gene            complement(2629..5373)
                     /gene="torS"
                     /locus_tag="RHX79_003404"
     CDS             complement(2629..5373)
                     /gene="torS"
                     /locus_tag="RHX79_003404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415513.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system sensor histidine
                     kinase/response regulator TorS"
                     /protein_id="HDV2198539.1"
                     /translation="MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQA
                     LIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQ
                     GFDTTAIEQQEQEISRSLRQQGELVGRRLQLRQQQRQLSQQIVAAADEIARLAQGQAN
                     NATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVM
                     NLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALY
                     QQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLL
                     LLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIG
                     RLMDAFRSNVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAA
                     MSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAG
                     GKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDMPCALMGDPRRIRQVI
                     TNLLSNALRFTDEGYIILRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRG
                     GTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGL
                     RLLLIEDNPLTQRITIEMLKTSGAQIVAVGNAAQALETLQNSEPFAAALVDFDLPDID
                     GITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYL
                     QLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIK
                     RAAHQLKSSCSSLGMRIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI
                     "
     gene            5456..6484
                     /gene="torT"
                     /locus_tag="RHX79_003405"
     CDS             5456..6484
                     /gene="torT"
                     /locus_tag="RHX79_003405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system periplasmic protein TorT"
                     /protein_id="HDV2198540.1"
                     /translation="MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASMPLKAKRA
                     WKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWG
                     AEAILLGSSTTSFPDLQKQVASLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQ
                     WAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQE
                     MLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASD
                     QMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFY
                     QHTSAAKK"
     gene            complement(6457..7149)
                     /gene="torR"
                     /locus_tag="RHX79_003406"
     CDS             complement(6457..7149)
                     /gene="torR"
                     /locus_tag="RHX79_003406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator TorR"
                     /protein_id="HDV2198541.1"
                     /translation="MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQN
                     QPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTK
                     PLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR
                     AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQ
                     HGEGYFLAADVC"
     gene            7289..8461
                     /gene="torC"
                     /locus_tag="RHX79_003407"
     CDS             7289..8461
                     /gene="torC"
                     /locus_tag="RHX79_003407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HDV2198542.1"
                     /translation="MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTST
                     TEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQ
                     TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQM
                     KVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAK
                     GDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGD
                     VQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHG
                     APEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK"
     gene            8461..11007
                     /gene="torA"
                     /locus_tag="RHX79_003408"
     CDS             8461..11007
                     /gene="torA"
                     /locus_tag="RHX79_003408"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDV2198543.1"
                     /translation="MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAAT
                     DAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRY
                     PMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGW
                     QSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLV
                     LQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTH
                     EYLGREHVKHIAVNPQTDVPLQLALAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEK
                     DGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLA
                     AMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIP
                     IARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGWRKLETVI
                     AIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDI
                     FRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFD
                     HPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGG
                     PGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDV
                     VRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIG
                     TSQLAQATSAHTTLVEIEKYNGAVEQVTAFNGPVEMVAQCEYVPASQVKS"
     gene            11004..11603
                     /gene="torD"
                     /locus_tag="RHX79_003409"
     CDS             11004..11603
                     /gene="torD"
                     /locus_tag="RHX79_003409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HDV2198544.1"
                     /translation="MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLL
                     KSEPPLAAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQ
                     EIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA
                     LWQWLPEFVVRCRQYDSFGFYAALSQLLLVLVESDHQNR"
     gene            complement(11696..12001)
                     /gene="cbpM"
                     /locus_tag="RHX79_003410"
     CDS             complement(11696..12001)
                     /gene="cbpM"
                     /locus_tag="RHX79_003410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HDV2198545.1"
                     /translation="MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWV
                     FDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP"
     gene            complement(12001..12921)
                     /gene="cbpA"
                     /locus_tag="RHX79_003411"
     CDS             complement(12001..12921)
                     /gene="cbpA"
                     /locus_tag="RHX79_003411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curved DNA-binding protein"
                     /protein_id="HDV2198546.1"
                     /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA
                     RFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHSDGQSFNAEDFDDIFSSIF
                     GQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL
                     NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS
                     PWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMP
                     PKPDENTAALWQQLADAQSSFDPRKDWGKA"
BASE COUNT         3202 a         3329 c         3443 g         3188 t
ORIGIN      
        1 aactggctgt taaatggcat ttataactat taggtgcaga gatattcgct taaatggatt
       61 agtttctttg tggaaaagta actgatgtta taatgtatga tgttgactat tgcactattc
      121 caataaaacc agtcagcttt aaacaagcag cgtcatatta agagagataa acatttgccg
      181 ctgttggtcc tcgcaggcca tttacgcggc aaaattccac gcgtaatcct ggtataagca
      241 cttctgcgtc gcggggagtg aatgcggaaa tatggacctg gacttcttta cgaccgtcgg
      301 aggggataat gaatcctttg ccgcttttgc gatcaaaggt tttgacaatt cctgtcattt
      361 tacgggacaa acaaattcct tactgaaaat actgtgccgc actatacggg gttaataaaa
      421 taaagccagc gatatttaag accgccggac ggctaaaata aaatttgctt aatctcaatt
      481 atcatgcgtt aatagctgcg tcggtttgaa agacagacag catacaaagt agtttactaa
      541 agcagttctc attatcaggc attatccctt tcttttgagt ctctctcctg aacactaagt
      601 agtttctgta ttaaagccct gtttgccgaa aggcccaaaa tgaaggaagt aaaatatgtc
      661 taataaaatg actggtttag taaaatggtt taacgcagat aaaggttttg gctttatcac
      721 tcctgatgat ggcagcaaag acgttttcgt ccatttcacc gccattcaga gcaatgaatt
      781 ccgcacgctg aacgaaaatc agaaagttga attttctatt gagcaggggc aacgtggccc
      841 cgcggcagcg aacgttgtta cgctctaagg ttgccgttat tactcaacat ctccatttcc
      901 gctgtccatg ttgtcatggt tcacagtacc gtacatcggc attcgatgtg acggagcgaa
      961 accctttggg cgctaagtgt attttttgta aatcgacgat gatcaccttt gataacgtcg
     1021 cgctgcaaat acgcacggac catgcgccgc tggatttcac aaaataatat caggctccct
     1081 cgtggagcct tttttatatc tgccttattt ttcttcaacg ctgtatgtat agtaagcgat
     1141 aacctgttga ttattgaatc tttcggggag atggcttata acatttctta cctgaccagg
     1201 gtaccgggaa ccaacacctt actggcgtgt tgctgtcttt caagaccaga cgaggttaac
     1261 agtgaatatt gaagagttaa aaaaacaagc cgaaacggaa atcgctgact ttatcgcgca
     1321 aaaaatcgcc gagctgaaca agaatacagg gaaagaagtc tctgaaattc gcttcaccgc
     1381 acgagaaaaa atgaccgggc ttgaaagtta tgatgtcaaa atcaaaataa tgtgattttg
     1441 tgaacatcac cccgtgcgag gtgatgttcc gcttgttgct aatttagtga ccaatcattg
     1501 gcgcttgtgg aattaagcgt cggtacaatt cctccggcac cgggctttgc catactcccg
     1561 catacattgc gtaaccaatc accgcaaaca taatccccag aaccagtagc gtcattaacc
     1621 agccagacaa cgcaaaagct tttttatttg ccgcaggttt ttgcagtgaa aaggtcaatg
     1681 ttgaggctac cggacatgac tctacgcaag tcatacagcc ggtacattcc actgttcgta
     1741 cctgaattaa tttatctacc gggatccgtg atgggcaatt ttttgcgcat ttgccacagt
     1801 cgatacaact ttcggcattg cgacgaatct taaacggcga caatagcgaa accacgccca
     1861 tcagcgcgcc atatgggcaa agataacgac accaggcatg gcgaataaac aggctggcaa
     1921 tcagcaaaac ggtcacgctg attaatgtcg cggtccccat atgacgaaag aaatcgagca
     1981 tttttacgtc catcaccacg ctgtagggcg acaacataaa atagtgaatc gcctgagcgg
     2041 gcatcaataa cgcgatatag agaaaaaaac tcaacagcaa ataattcacg ccgcgcagag
     2101 gaatatccag ccagcgggga aggacacatt gccgaccaaa cagtttgtta ccgagatcgc
     2161 cgattaattc agaaagcgta ccaaccgggc ataaccatga gcaaaaggcc tttttgagta
     2221 atagactgat gacgataaaa gcgaccaata acagcatcgc ggcgacgtgg acggacggta
     2281 actgacctgt tgtaaggcta tatttcagat tcatcagacc ggcaatcggt agccagcctt
     2341 cgatacctcc cggtctggcg acaaatgtcg tgctacttgc cgtttcgtaa tagcgcaccc
     2401 aataccagaa cgtgatggca atataaatat tcattgccaa cagtaataat tgcgtcgctt
     2461 tacgccaggt cgtggcatta cgccagtcat tccacggtaa tttgccgccc gtcgtgcctg
     2521 gccgccgctg ccagcgggtt cttttattct ctgccatgat tttgccagtc cgttaagttg
     2581 tataccaaat gccactattc tagttgttct taactggctg atattgattc aaatcgcgtt
     2641 caggtctttc ttatgcaacc atgcttccag agcggcaaca ctgcgtgtaa tttcttcgtg
     2701 tggaaggggg gcagataatg gctgctgctc cagttgtgcg catagctggc tggcgatacg
     2761 cattcccaga ctcgagcaac tgctttttag ctgatgcgcg gcacgcttta ttttctcgct
     2821 atcctgactg gcgcgggcaa tgtcgatttc atcgagaagc ggcagggcat gttgtgtaaa
     2881 taataccagc cattcgtgga tcttctccgt ccccattaac tgagcatctt cattgagttg
     2941 cgatacatcc agcgattgat cattattgac ttgcagttgg agatagtgcg ccagtaactg
     3001 accgagcact tcacgcggca ccggtttagg gataatcccg cggaataatg aactggtacg
     3061 ctggcgcagc gtttcgtcaa tgacatgggc gctaaagcca atcaaaacca gcgacggata
     3121 ttgctgtgcc agttgtcggg caagcgtaat gccgtcgata tccggcagat caaaatccac
     3181 cagtgcggca gcaaacggtt cgctattttg cagtgtctct aaagcctgcg cggcattgcc
     3241 aacagcaaca atctgcgcac cactggtttt cagcatctca atggtaattc gctgggttag
     3301 cgggttatct tcaattaaca gcaaacgtaa accgtcaaga cgcaccgcct gattgactgt
     3361 ttttggcacg ggtgccgtgg caacacgtaa cggcaagcgt aaacaaaaac agcttccaac
     3421 ctccggcgtg ctggtggcgc tcagttcgcc gcccatcgcc tgggccagac ggctactgat
     3481 agtcagtccc agcccggtgc cgccgcgttt gccgcttacc tgcacaaatg gctggaagat
     3541 ttctgccagt ttcgcgggat caataccgca gccgctgtct tccacttcga ccagccattg
     3601 ctcgccatca gtgcgactac gcaggataat gtacccttcg tcagtaaaac gcagggcgtt
     3661 gctcaacagg ttggttataa cctgacgaat acgtcgtgga tcgcccatta acgcgcacgg
     3721 catatcatcg gcaattgccg ttgccaggcg aatcgggcga cctttcaccc gtccgctcat
     3781 taattgcagg gtactttcca gcagcgggcg cggttcaaag ggctcatcgc tgaccgaaac
     3841 attcttgcca cctgcttcga tagcggaata atcgagaata tcgttgagga tggtcagcaa
     3901 cgattcacca gagtcagtaa ttgcccgcaa atcatcacgc tgggcgttaa gtgcggggtt
     3961 atctgccagt agctgtgcgg tgccgagaat accgtacagc ggtgtgcgga tctcatggct
     4021 catcgccgcc agaaacgccg attttgcctg gctggctttt tctgcttccg cccgtgcctg
     4081 tcggtgttct atcaccagtt cctgcaattc agctgtacgc gctttgacct gcgccgccag
     4141 ctgttcgcgg tggcgattca gtgcatgaac attgctgcga aacgcatcca tcagccgccc
     4201 gatggtatcc agctcccgta cgccagcggt ttccgggaaa ggggagtcaa tatcaccgtc
     4261 cagcagccgt tgcagcgcct gcgtttgttc ggcaagtgga cgcgtgactg agcgataaac
     4321 cacgcgccag aggatcagaa tcagtgcgca aagtgaaacc atccccagca ataacaggct
     4381 gtattgcccg cgtgcactgg ctttttccag atgcgccagt ccgtgctgat tacgcagctc
     4441 aatggtgtcg accagctgac tgacttcgct actaaactgc gcgaactggg cgatgttatt
     4501 ttgtgcgaga gtttgtaggt gattgctgat ttcactgtcc tgctgataca gcgccagcaa
     4561 atcgctatat tggctaacgg tagttaacgt tgttgcgacc tgcgcacgaa cacccggatc
     4621 ttcaatgcgt atttgccgac gttgcagaat tttcaccgca ttattgagct gcttttccag
     4681 cgttggtgca tttttctgga tctgctccag ccccagattc atcaccattt gctgcacccg
     4741 cagagcgcta aggcgcagtt cattcatctg gttaacatac tcaagatcga tatcaatcag
     4801 ccgatcgagt gcactttcag cagcctgacg ctgatcttgt tcgatcaaat cgtaaatccc
     4861 ggcctgggtc gctccagcgg aagttgtcgc attattcgcc tgaccttgcg ccaggcgtgc
     4921 gatctcatcg gcggcagcga ctatctgctg actgagttgc cgttgttgct ggcgtagttg
     4981 cagacgccgc cccaccagtt ccccttgctg acgtaatgaa cgggagatct cctgctcctg
     5041 ttgttcaata gcggtggtat caaaaccttg ttcccgtaac gcttgcagca acgcattaat
     5101 cttcaggctt tgtgcggtga gcattcgccc ctgcgcctgc cacatctttt cgttatcggc
     5161 actggtcagg ttctgcgcgg cgaaaagttc ccaggcgctg gcttcgctca actggcgcgc
     5221 catattcatg gtaggaatca atgcctgagt gttgtctttt tccacctggc tgataaagcg
     5281 caggttgtac catcccacca gggtactggt cagggttaac agcgccatca gggcaaagcc
     5341 catccagagt cttcgggtca gggttaaatt cacggtcggt gcacttaagg tgaaaaaggt
     5401 tgagtcgcaa agcggaatgc atctagcata aagccttatt attgatgagg ctatcatgcg
     5461 cgtactgcta tttttacttc tttccctttt catgttgccg gcattttcgg ctgataacct
     5521 gttgcgctgg catgatgcgc agcatttcac ggtgcaagcc tctatgccgc ttaaagccaa
     5581 acgcgcatgg aaactgtgcg cgctttatcc cagcctgaaa gattcatact ggttatcgtt
     5641 gaactatggt atgcaggagg cagctcgccg ctatggtgtg gatttaaaag tgctggaggc
     5701 aggcggctac agccagttgg ctacccagca agcacaaatc gaccagtgta aacagtgggg
     5761 cgcagaggcc attttactcg gtagtagcac gacctcattt cccgatctgc aaaagcaggt
     5821 agcaagtctg ccggtgatcg aactggtaaa tgctattgat gctccccagg tgaaaagccg
     5881 cgttggtgta ccctggtttc agatgggcta tcaacctggg cgatatttgg tgcaatgggc
     5941 gcacggtaaa ccactgaacg tgctgttgat gcccggaccc gataatgccg ggggcagtaa
     6001 agagatggtc gagggttttc gcgcagccat tgccggaagc ccggtgcgta ttgttgatat
     6061 tgcgcttggt gataacgata ttgaaatcca gcgtaacctg ttgcaggaga tgctggaacg
     6121 ccacccagaa atcgacgtcg ttgccggaac ggccattgcg gcagaggcgg caatgggtga
     6181 agggcgtaac ctgaaaacgc cgcttaccgt ggtgtcgttt tatctttcac atcaggtgta
     6241 tcgcgggctg aagcggggaa gagtgattat ggctgccagc gatcaaatgg tctggcaggg
     6301 ggaactggca gttgagcagg ccatcaggca attacagggg caatcggtgt ctgataatgt
     6361 cagcccaccg attttagttc tgacgccgaa aaatgccgac cgagaacata tccgccgctc
     6421 gctgtcacca gggggatttc gtccggtcta tttttatcag cacacatcag cggctaagaa
     6481 ataaccttca ccatgttgcg tcaccagtaa atccgcgctg agtttatgac gtaaacgacg
     6541 aattaacaca tcgacggtgc gcaggtcagg gttttccacc cgacgcgcag aaagcatacg
     6601 tagcagacgt tcacggctga gaatttcgcc cggattcgtc acaaatgcca ccaacatttc
     6661 atactctgcg cgggtcagtt taatcggctc gccatcccgc tccagcgtat ggcgcgacac
     6721 attcaggcaa taaccggcaa agcgatagca gttgtcctga gtgtgcggtt gagcttgtcg
     6781 cgcgaggtcg attcgccaga gcagattttt cacccgtact accagttcgc gcagttccag
     6841 cggtttggtg acgtaatcgt ctgcgcccat ttccagccca acaatacggt caatccgatc
     6901 gctgcgtccg gtaaccagaa taatccccac cgttgagcgt tctcgcaggg cgcgggttaa
     6961 catcaggcca ttttcatcgg gtaagttgat atccagcaga attaaatcta ccggctgatt
     7021 ctgcataatt tcccgcagcc cggcaccgct cgctgtaacg gaaacggtat acccctcctg
     7081 agtgaagtaa gattgtaatc gcgcctgggt aaccggctca tcttcaacaa taacaatgtg
     7141 atgtggcatc agagggtttt actcattctg ttcatatctg ttcatatctg ttcatattct
     7201 gccgtaagcc gttcatcctg accagtgccg ctgttcatat ttgctcatta agatcgcttc
     7261 actaaaccat aattttacag gggctattat gcggaaactc tggaacgcgc tacgccgacc
     7321 cagtgctcgt tggtcggtac tggcgctggt cgcaattggg attgtgattg gcattgcgct
     7381 gattgtattg ccacacgttg ggatcaaagt caccagcaca accgaatttt gtgtcagttg
     7441 ccacagtatg caaccggtgt atgaagaata taaacagtcg gtgcatttcc agaacgcctc
     7501 cggcgtgcga gctgaatgcc atgactgtca tatcccgccg gatattccag gcatggtgaa
     7561 gcgcaaactg gaagcgagca atgatatcta ccagaccttt attgctcact ccattgatac
     7621 acctgaaaaa ttcgaagcca aacgcgcgga acttgccgag cgtgaatggg cgcgaatgaa
     7681 agaaaacaac tcggcaacct gccgctcctg ccataactac gatgcgatgg atcatgcgaa
     7741 gcagcatcct gaagcggcac gtcagatgaa ggtggcagcg aaagataatc aatcctgcat
     7801 cgactgtcat aaaggtattg cccaccagtt accggatatg agtagcggct tccgtaagca
     7861 gttcgatgag ctgcgcgcca gtgctaatga cagtggtgac acgctgtact ctattgatat
     7921 taagccaatt tatgcggcga aaggcgataa agaagcctct ggttctctgc tgcctgcttc
     7981 ggaagtgaaa gtccttaaac gtgacggcga ctggctgcaa attgaaatta ccggctggac
     8041 ggaaagcgcc ggacgtcagc gtgtactcac ccaattccca ggtaaacgca tctttgttgc
     8101 ctcgattcgt ggtgatgtgc agcagcaggt aaaaacgctg gagaaaacca ccgttgccga
     8161 caccaatacc gagtggagca agttgcaggc cactgcgtgg atgaagaaag gcgacatggt
     8221 gaacgatatc aaaccgatct gggcttatgc ggattcgttg tacaacggca cctgtaacca
     8281 gtgccacggc gcaccggaaa tcgcccactt tgacgctaac ggttggatcg gcacgctcaa
     8341 cggcatgatt ggctttacca gtctcgataa acgtgaagaa cgcaccttgt tgaaatatct
     8401 gcaaatgaat gcgtctgaca ccgcaggtaa ggctcacggc gataagaagg aagaaaaata
     8461 atgaacaata acgatctctt tcaggcatca cgtcggcgtt ttctggcaca actcggcggc
     8521 ttaaccgtcg ccgggatgct ggggccgtca ttgttaacgc cgcgccgtgc gactgcggcg
     8581 caagcggcga ctgacgctgt catctcgaaa gagggcattc ttaccgggtc gcactggggg
     8641 gctatccgcg cgacggtgaa ggatggtcgc tttgtggcgg caaaaccgtt cgaactggat
     8701 aaatatccgt cgaaaatgat tgccggattg ccggatcacg tacacaacgc ggcgcgtatt
     8761 cgttatccga tggtacgcgt ggactggctg cgtaagcgcc atctcagcga tacctcccag
     8821 cgcggtgata accgttttgt gcgcgtgagc tgggatgaag ccctcgacat gttctatgaa
     8881 gaactggaac gcgtgcagaa aactcacggg ccgagtgcct tgctgaccgc cagtggttgg
     8941 caatcgacgg ggatgttcca taacgcttcg gggatgctgg cgaaagctat tgccttgcat
     9001 ggtaatagcg ttggtacggg cggagattac tctaccggtg ctgcgcaggt gatcctgccg
     9061 cgcgtggttg gctcaatgga agtgtatgaa cagcaaacct cctggccgct ggtattgcag
     9121 aacagcaaaa ccattgtgct gtggggctct gatttgctga aaaaccagca agcgaactgg
     9181 tggtgcccgg atcacgatgt ttatgaatat tacgcgcagc taaaagcgaa agtcgccgcc
     9241 ggtgaaattg aggtcatcag catcgatccg gttgtcacat ccacccatga gtatctgggg
     9301 cgcgagcatg tgaagcacat tgcggttaac ccgcaaactg atgtgccgct gcaactggcg
     9361 ctggcgtata cgctgtacag tgaaaacctg tacgacaaaa acttcctcgc taactactgt
     9421 gtgggttttg agcagttcct gccgtacctg ctgggtgaga aagacggtca gccgaaagat
     9481 gccgcatggg ctgaaaaact gaccggcatt gatgccgaaa ccattcgtgg gctggcgcgg
     9541 cagatggcgg cgaacagaac gcaaattatt gctggctggt gcgtgcagcg tatgcagcac
     9601 ggtgaacagt gggcgtggat gattgtggtt ctggcggcga tgctggggca aattggcctg
     9661 ccaggtggtg gttttggttt tggctggcac tacaacggcg caggcacgcc ggggcgtaaa
     9721 ggcgttattc tgagtggttt ctccggctct acgtcgattc cgcctgttca cgacaacagt
     9781 gactacaaag gctacagcag cactattccg attgcccgtt ttatcgatgc gatcctcgaa
     9841 ccggggaaag tgatcaactg gaacggtaaa tcggtaaaac tgccgccgct gaaaatgtgt
     9901 atttttgccg gaactaaccc attccatcgc catcagcaga tcaaccgcat tattgaaggc
     9961 tggcgcaagc tggaaacggt tatcgccata gataaccagt ggacctcaac ctgccgcttt
    10021 gccgatatcg tgctgcctgc gaccacgcag tttgagcgta acgatctcga ccagtacggc
    10081 aaccactcca accgtggcat tatcgccatg aaacaggtgg tgccgccgca gttcgaggcg
    10141 cgcaacgact ttgatatttt ccgcgagctg tgccgtcgct ttaatcgcga agaagccttt
    10201 accgaagggc tggacgaaat gggctggctg aaacgcatct ggcaggaagg tgtacaacaa
    10261 ggcaaaggac gcggcgttca tctgccagcg tttgatgact tctggaataa caaagagtac
    10321 gtcgagtttg accatccgca gatgtttgtt cgccaccagg cattccgcga agatccggat
    10381 ctcgaaccgc tgggcacgcc gagtggcctg attgagatct actcgaaaac catcgccgat
    10441 atgaactacg acgattgtca ggggcatccg atgtggtttg agaaaatcga acgctcccac
    10501 ggtgggcccg gctcgcagaa gtatccgttg catctgcaat ctgtgcatcc ggatttccga
    10561 cttcactcgc agttatgtga gtcggaaact ctgcgtcagc aatatacggt agcgggtaaa
    10621 gagccagtgt tcattaaccc gcaggatgcc agcgcgcgcg gtattcgtaa cggtgatgtg
    10681 gtacgcgtct ttaacgctcg cggtcaggtg ttggcagggg cagtagtttc tgaccgctat
    10741 gcacccggcg tggcacgaat tcacgaaggg gcatggtacg atccagataa aggcggcgag
    10801 cctggtgcgc tgtgcaaata cggtaacccc aacgtgctga ccatcgacat cggtacttcg
    10861 cagctggcgc aggcgaccag tgcgcacact acgctggtgg aaattgagaa gtacaatgga
    10921 gcagtggagc aggtgacggc gtttaacggc cctgtggaga tggtggcgca gtgcgaatat
    10981 gttcccgcgt cgcaggtgaa atcatgacca cgctgacagc acaacagatt gcctgtgttt
    11041 acgcctggct ggcgcagttg ttctcccgtg aactggacga tgaacaactg acgcaaatcg
    11101 ccagtgcgca gatggctgaa tggttttcgt tgctgaaaag cgaaccgccg ctggctgcgg
    11161 cggtgaatga gctggaaaac tgtattgcca cgctgacagt acgtgacgat gcccgtctgg
    11221 aactggccgc tgacttttgc ggcctgtttc tgatgaccga caaacaagcg gcgctgccgt
    11281 atgcatcggc ctacaaacag gacgagcaag agattaaacg cttgttagtt gaggcaggga
    11341 tggaaaccag cggcaatttc aacgaaccgg cagatcatct ggcgatctat ctcgaattgc
    11401 tcagccatct gcatttttcg ctgggagagg ggaccgttcc tgcgcgaaga atcgacagtt
    11461 tgcggcaaaa aacactgacg gcgctgtggc aatggttacc agagtttgtc gtgcgttgtc
    11521 gtcagtatga cagctttggt ttttacgcgg cactaagcca gttattgctg gtgttagtgg
    11581 agagcgacca ccaaaacaga taacgtcgtt tgtgcgcctg aaaagacgcg tttagcgtcg
    11641 catcaggcat tatggggcag ttgccggatg cgtcatcaca tccggcaaac acacatcacg
    11701 gatgagctac aaaccgggaa agtcgctggc gcagcaggcg gttttcctgc ttcaggtgcg
    11761 caatatcatc cattaacgtc agcgccaccg cgatcccagg ccagtccaga gccagttcat
    11821 gacgcaggcg tactgcgcgt tgcaccacga tggcggcatg gtcgtcaaat acccaggttg
    11881 tttcctggat ctcacgcggt tcaaccaccc ccaaaccgac aatttcattc aactcctctt
    11941 cagagatgcc ggtatgcagg caaaattcgg taatagtaaa agtcaccgta acattagcca
    12001 ttatgctttc ccccaatctt tacgtggatc aaaagacgac tgggcgtctg ccagttgctg
    12061 ccacagcgcg gcagtgtttt catccggttt cggcggcatc acgattttca gtaccgcata
    12121 cagatcgccg gtctgttttt tgctcaccag acctttgcct ttaacgcgca atcgttgccc
    12181 ggcctggctg cctggcggga tagtcagcaa aatgctttct ttcagtgttg gaacggtgac
    12241 tttagcaccc agcgccgctt cccacgggct aaccggcacc acaatttcca gatcctggcc
    12301 gacaatatcg aacagcggat gtggcgcaat atgaatcacc agccacaaat cgccatttgg
    12361 accgccgttt tcgcccggcg tcccctggcc tttcagacgg atgcgttgac cattgccgac
    12421 gcccgccggg atcttgacat tcagcgtttt cggaatttcc tgttcgatca tgccaaaggc
    12481 gttataaacc ggcaggttat agctgatggt acgcttatgc tcagtaagcg tttcttcgag
    12541 gaataccgcc acttcgattt caatatcgtg gccgcgtgtg gcggggcgtt gacggctctg
    12601 gcgggcatgc tgaccgaaaa ttgacgagaa gatatcgtca aaatcttcgg cgttaaaact
    12661 ctgaccgtcg ctatgatgga actgacggtt aaattgcgga tcgttgcgat gttgccacat
    12721 ctgatcatac tcagcgcgac gttgttcatc acttaacact tcccaggctt cagcgacctc
    12781 tttgaagcgg gcttcggcat ccggttcttt gctgacatca ggatggtatt tgcgggccag
    12841 tcgacgatag gcggtcttga ttgtcttgag atcgtccgtc ggtttcacgc ccatgatggc
    12901 gtaataatcc tttaattcca tagcgttatc tcgcgtaaat caacacaaat tgaaggaacc
    12961 cctgtaaggt aactcctata agtgtagggt aatcctcaaa atttcatatg ccaacacaga
    13021 atatgttatt gaaatcatcg cggagaggag gtcgcctcaa ggtggggtgc tgaacatatt
    13081 ttaaacaggt gaaaaagggt gagcgatttt tgatagtgga accaggcact ttaagtttaa
    13141 ctggggcgtc attatttatt aa
//
LOCUS       DAPGWB010000122        13055 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.123, whole genome shotgun sequence.
ACCESSION   DAPGWB010000122 DAPGWB010000000
VERSION     DAPGWB010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 13055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13055
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.123"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            398..1087
                     /gene="mutH"
                     /locus_tag="RHX79_003412"
     CDS             398..1087
                     /gene="mutH"
                     /locus_tag="RHX79_003412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HDV2198547.1"
                     /translation="MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENL
                     KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTG
                     NSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWSPNEEEDRQLREDWEE
                     LMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFT
                     SALLARHFLIQ"
     gene            1156..1869
                     /locus_tag="RHX79_003413"
     CDS             1156..1869
                     /locus_tag="RHX79_003413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDV2198548.1"
                     /translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ
                     RAHARRLGLAGAMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWK
                     ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA
                     VVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAM
                     FFSIAVESLNLIRNKKNPL"
     gene            2007..2225
                     /gene="ygdR"
                     /locus_tag="RHX79_003414"
     CDS             2007..2225
                     /gene="ygdR"
                     /locus_tag="RHX79_003414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YgdR"
                     /protein_id="HDV2198549.1"
                     /translation="MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDD
                     DTGLVSYHDQQGNAMQINRDDVSQIIER"
     gene            2333..3373
                     /locus_tag="RHX79_003415"
     CDS             2333..3373
                     /locus_tag="RHX79_003415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(H)-dependent aldo-keto reductase"
                     /protein_id="HDV2198550.1"
                     /translation="MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGI
                     NLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPD
                     QALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT
                     LDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVG
                     LAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAA
                     YVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI
                     EAVHQVYTYPAP"
     gene            complement(3405..4598)
                     /gene="lplT"
                     /locus_tag="RHX79_003416"
     CDS             complement(3405..4598)
                     /gene="lplT"
                     /locus_tag="RHX79_003416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid transporter LplT"
                     /protein_id="HDV2198551.1"
                     /translation="MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQ
                     FYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINP
                     FLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD
                     WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGET
                     RFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKL
                     VTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERG
                     KKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVIIGIPVVPIGIGFGALFALAITALWI
                     WQRRH"
     gene            complement(4591..6750)
                     /gene="aas"
                     /locus_tag="RHX79_003417"
     CDS             complement(4591..6750)
                     /gene="aas"
                     /locus_tag="RHX79_003417"
                     /EC_number="2.3.1.40"
                     /EC_number="6.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acyl-ACP--phospholipid
                     O-acyltransferase/long-chain-fatty-acid--ACP ligase"
                     /protein_id="HDV2198552.1"
                     /translation="MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGIL
                     LGLFLPVRPVFAVYTSISQQWYMRCLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVI
                     FPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI
                     TLHILPPTQVEMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFG
                     AGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAI
                     ARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE
                     DLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILA
                     NVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPEL
                     VYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL
                     EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNG
                     YLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDELGFVQIQGRAKRFAKIAGEMV
                     SLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPEL
                     AVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE"
     gene            7336..8367
                     /gene="galR"
                     /locus_tag="RHX79_003418"
     CDS             7336..8367
                     /gene="galR"
                     /locus_tag="RHX79_003418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalR"
                     /protein_id="HDV2198553.1"
                     /translation="MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLS
                     YHPNANARALAQQTTETVGLIVGDVSDPFFGAMVKAVEQVAYHTSNFLLIGNGYHNEQ
                     KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDD
                     RYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGE
                     PDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVL
                     VSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSL
                     EASHHATSD"
     gene            complement(8374..9636)
                     /gene="lysA"
                     /locus_tag="RHX79_003419"
     CDS             complement(8374..9636)
                     /gene="lysA"
                     /locus_tag="RHX79_003419"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDV2198554.1"
                     /translation="MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALK
                     QFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTAD
                     VIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
                     NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD
                     LQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQ
                     SGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVE
                     TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLL
                     PEVLFDNGQARLIRRRQTIEELLALELL"
     gene            9758..10693
                     /gene="lysR"
                     /locus_tag="RHX79_003420"
     CDS             9758..10693
                     /gene="lysR"
                     /locus_tag="RHX79_003420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator LysR"
                     /protein_id="HDV2198555.1"
                     /translation="MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEK
                     VIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP
                     VFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTER
                     TELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR
                     RMIVETHSAASVCAMVRAGVGVSVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLH
                     RPSSALVQAFSEHLQAGLPKLVTSLDAILSSATTA"
     gene            complement(10680..11372)
                     /gene="ygeA"
                     /locus_tag="RHX79_003421"
     CDS             complement(10680..11372)
                     /gene="ygeA"
                     /locus_tag="RHX79_003421"
                     /EC_number="5.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HDV2198556.1"
                     /translation="MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVD
                     FHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFL
                     HIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQI
                     IFEELCLGQFTEASRAYYAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAA
                     IHAEDAVAFMLS"
     gene            complement(11501..12919)
                     /gene="araE"
                     /locus_tag="RHX79_003422"
     CDS             complement(11501..12919)
                     /gene="araE"
                     /locus_tag="RHX79_003422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-proton symporter AraE"
                     /protein_id="HDV2198557.1"
                     /translation="MVTINTESALTPRSLRDTRRMNMFVSVAAAVAGLLFGLDIGVIA
                     GALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLG
                     SIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLG
                     IVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVL
                     RMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNI
                     IMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVM
                     ALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKC
                     RDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETK
                     NVTLEHIERKLMAGEKLRNIGV"
BASE COUNT         3315 a         3507 c         3208 g         3025 t
ORIGIN      
        1 ttgagtaatg aaaaagagta attcgtgacc caggtcacac ctctcattta cgggttggcg
       61 aaagatcaac caatgccgta tttatccaca gaatgtgcca ctaagttaag cactgaacca
      121 ctaaaaactg gagtttcgtc gcacgtcaag gctgtaaatg gaaacagtag tggaggtttt
      181 tcacagttat cccagctttc tgtggataac atggtgtaag atcctgttta ttttcagtga
      241 ccagatttgg aaaacccgtt gcagtgttgc gcaactcgat taccggcaac ctaaaaagca
      301 atataaatca gagaattgaa caacgcatgt ggaaaaagtt acactgcgaa tattcggcac
      361 ataattgctg tttgtttttt aatcaaggta tcatgacatg tcccaacctc gcccactgct
      421 ctctcctccc gaaactgaag aacagttgtt agcgcaagca cagcaacttt ctggttatac
      481 attgggagaa ctggcggcac ttgccgggct ggttacgcca gagaatttaa aacgcgataa
      541 aggctggatt ggcgtgttac tggagatctg gctaggtgcc agcgcaggga gtaaacctga
      601 gcaagatttt gctgctctgg gcgtggaact taaaactatc cctgtggata gtcttggtcg
      661 tccgctggaa acaacattcg tttgtgttgc cccgttaacg ggcaatagcg gggtgacctg
      721 ggaaaccagc cacgtgcgcc acaaactcaa acgcgtactg tggataccag ttgaaggcga
      781 gcgcagcatc ccgctggcgc agcgtcgcgt tggatcaccg ttgctgtgga gcccgaatga
      841 agaggaagac cgacagctac gcgaagactg ggaagaatta atggatatga ttgttctcgg
      901 tcaggttgag cggattaccg ctcgtcacgg ggaatattta cagatacgac cgaaagcagc
      961 gaatgcgaaa gcgcttaccg aagccattgg tgcccggggc gaacggattc tgacgctgcc
     1021 acgcggcttt tatttgaaga agaatttcac cagtgcgcta ctggcccgtc attttctgat
     1081 ccagtagcca tcgctttgac ctgccgcttt ccgggcatat aattaccgct tcattttttt
     1141 ggcagggctt tttagatgtt atttgcatgg ataaccgatc ctaacgcctg gcttgcgctc
     1201 ggtacgctga cgctgctgga gatcgttctt gggatcgaca atattatttt cctttctctg
     1261 gtggtggcaa agcttcccac agcacaacgt gctcatgcgc gccgtctggg gttggcggga
     1321 gccatggtta tgcgtctggc gctgctggca tcaatcgcct gggttacgcg cctgacaaat
     1381 ccgcttttta caatattcag tcaggaaatt tccgcccgtg atttgattct gcttctgggt
     1441 ggcttgttcc ttatctggaa agccagcaag gaaatccacg aatccattga aggtgaagaa
     1501 gaagggctga aaacacgcgt ttcatcattc ctcggcgcta tcgtgcagat tatgctgctg
     1561 gatattatct tcagcctcga ctcggtgatt accgctgtgg gtctgtcaga tcacctgttt
     1621 attatgatgg ccgccgtggt gattgccgta ggcgtgatga tgttcgccgc gcgctcgatt
     1681 ggtgattttg tcgaacgcca tccttcggta aaaatgctgg cgctctcttt cctgattctg
     1741 gtcggcttta ccctgattct ggaaagtttc gacatccacg taccgaaagg ttacatctac
     1801 ttcgcgatgt tcttctctat tgcggttgaa agcctcaacc tgattcgcaa caaaaagaac
     1861 ccgctctgat actccgtacg ctctcctgcg ggagggcgta ctcactcctg ttaccctcac
     1921 agtttaagat tttcctgctt tcaagatata taacgtcggt ttataaacag actattatca
     1981 taggtgggcc aaatgaggat aaccggatga aaaaatgggc agtaataatt tctgcagtcg
     2041 gactggcgtt tgctgtttcc gggtgttcca gtgattacgt catggcgacc aaagatggcc
     2101 gtatgatttt gaccgatgga aaacctgaaa ttgatgatga taccgggctg gtgagttatc
     2161 acgatcagca aggtaacgcg atgcaaatta accgtgatga tgtttcgcaa attattgaac
     2221 gttaacaaat aaggtcagca tccggctggc cttaagattt ttctctttcc cttttccctt
     2281 ccctctgcca tttttatatt ccttatgtcg tgattataaa aaggaaacgg ctatgcaata
     2341 tcaccgtata ccccacagtt cgctggaagt cagcacgctg gggcttggca cgatgacgtt
     2401 tggtgaacag aacagcgaag ccgacgccca cgcacaactc gactatgccg tcgctcaggg
     2461 cattaacctt atcgacgttg ccgaaatgta cccagtacct ccgcgccccg aaacgcaagg
     2521 gttaaccgaa acctacgtcg gcaactggct ggcgaaacat ggcagccgcg aaaagttaat
     2581 tatcgcctcc aaagtgagcg gaccgtcgcg caataatgac aagggcatcc gcccggatca
     2641 ggcgctggat cggaagaata tccgcgaagc gctgcatgac agcctcaagc gcctacagac
     2701 tgattacctc gatctttatc aggtgcactg gccgcagcgc ccgaccaact gcttcggcaa
     2761 actcggttat agctggacgg attctgcgcc tgcggtttcg ctgctggata cgctggacgc
     2821 actggcagag taccaacgcg cgggaaaaat tcgttatatc ggcgtgtcga acgaaactgc
     2881 atttggcgta atgcgctacc tgcatctggc ggacaaacac gatctgccgc gtattgtcac
     2941 cattcagaac ccttacagtc tgttaaaccg cagttttgaa gtaggtctgg cagaagtcag
     3001 ccagtatgaa ggggtcgaac tgctggccta ttcgtgcctg ggtttcggca cgctgaccgg
     3061 gaaatatctc aatggtgcaa aacccgctgg cgcacgtaat acgctcttta gtcggttcac
     3121 ccgctatagc ggtgagcaaa cgcaaaaagc cgtcgcggcg tatgttgata tcgccagacg
     3181 tcatggcctg gaccctgctc agatggcgct cgcgtttgta cgccgtcaac cgtttgttgc
     3241 cagcactctg ctgggcgcaa ccacgatgga tcagctgaaa actaacatcg aaagtttgca
     3301 tctggagtta agcgaagacg tattagctga aattgaagcg gtgcatcagg tttatactta
     3361 tccggcacca taagattaac gccggttaaa accggcgtta aatattaatg acggcgctgc
     3421 cagatccaca gcgccgttat tgccagcgca aacagcgcac cgaagccaat gccaatgggc
     3481 acgaccggga tgcctattat taccgccagc gagtaaatgc ccagcatcaa caacatggcg
     3541 ctgttttcgc caaggttttg tactgcaatc gcattccccg ccccgacgct ttttttaccc
     3601 cgctcctgta gcaacgcatt gagcggaacg acaaaaaagc cccccatcac gccaatcagc
     3661 atcaacaagg cataggctgg cagcagctcg tgttgcaggg aaaaaatcag taccaccacg
     3721 ccaatcaaaa tcccggctgg catacagcgt gacacggttt ccagcgtaac taacttcgct
     3781 gccgcacctg cgccaaccac gataccaatc gctaccatcg cgttgagata ggtgggcgta
     3841 gcgttatcgg taatgcccag cgccaccggt acccacagca ccaacaggaa acgcagcgtg
     3901 acacccgctc cccagaataa actggtgccc accagcgaaa aacgcgtttc accattgcgc
     3961 catagcgagg tgcaggcatt caggaaactg cgggtcatgt tgatgagatt ccaggactgc
     4021 cccggacgcg ccgccgccag tttgggaatg tagatattgg caacgaccgc accaccgtag
     4081 gccagtgcgc atgcggccag ggcgacgagg acatgccagt cagccagcac accaccggct
     4141 acggaaccga gcaaaatcgc cgctatggta gaagcttcca ttaaaccgtt agctttcact
     4201 aacttactac ccgtggttaa ttcgccgaga ataccgtatt tcgccggtga ataggctgca
     4261 gcaccaacac ccaccagcgt atagccgaga aacggattga taccaaagca gatactggct
     4321 gcgcccagca gcttcaggcc gttggcaaac atcatcaccc ggcctttggc gaagctatcc
     4381 gccacctgcc cgacaaacgg cgcaaaaaga atgtaagcac ctacaaacac catttgcagg
     4441 atgggctggc tccactccgg atagaactgc gctttcagta acgccagagt ggcaaacagt
     4501 agggcattat cgccaaacgc agagagaaac tgcgccacga taaccgcttt catccccttc
     4561 gaccacaacg aagtgttagt gtgcactgac tcactcatcg tgttgttccg cttcgtctac
     4621 ccagcttttc aacgtgacaa agtcaggttt gccgctgcca agtaatggca tctgtttcag
     4681 atagcgaata tcgcgcggta cagcaagctc cggcacgccg tgctcgcggg catactgttg
     4741 caacttatcg cgcgtcagtt cgttatctgt ggtgaaaagc accagtgcct cgcctttgct
     4801 ggcatcgctc ttaatcgcag tggcatggac tttatctggc gaaacaccaa gtgccagttg
     4861 ttccaccatt tccagcgaca ccatttcgcc tgcaattttg gcaaagcgtt ttgcgcggcc
     4921 ctgaatctgc acaaagccca gctcgtcaaa acgcacaata tcgccagtgt cataccagcc
     4981 gcgctccatt tcgccgcgaa cattctcggc ggtgggcact tccagtacac ctggcttctc
     5041 cacccgcaga tagccgttca ttatgttcgg ccctttcagt tgcaggcgtc cgccctcttc
     5101 gataccaggg accgacaaca ggcgcgcatc cattcctggt agaatacgcc ctaccgtacc
     5161 gggtttcgcc gccatcggta cgttgataga aacgacaggc gcgcattcgg tcacaccgta
     5221 gccttcaagg atgcgcaggc caaatttatc ctgccaaagc tgtttggtac tttcttgtag
     5281 tttttctgcg cctgccacca catagcgtag acgatagaag tcatacgggt tggcgaaacg
     5341 cgcgtagtga ccgaggaaag tcgaagtgcc gaacaacacg gtgcaactgc ggtcatacac
     5401 caactccggc acaatacggt aatgcagcgg gcttggataa agaaacactt ctgcacctgt
     5461 gagcagtggc gtaaacaggc ctaccgtcag cccaaaggag tgaaacagcg gtaacgccga
     5521 cataaagcga tcgttggtgg tgaagtcggc aatcgtttta atctgctcga cattcgccag
     5581 aatgctttta tggctatgga cgacgccttt cggatggcct tcagaaccgg aggtaaaaag
     5641 gatcagcgcc tcttcttccg gctgctgttt aacctgtgcc agacgcggca tcagcaaatg
     5701 agcgaagatc catactttgt cggcagtggt gacatctgct tttaaatctt ccagatagac
     5761 ccagcgcacc tgagtaagtt gctccggcag atgccagagt ttgcctttat cgagaaactg
     5821 gcgggaagtg aagatggttt tgatttcagc cgccgtaata gcactggtca gcccttttac
     5881 cccggcagtg tagttcatca ttgcgggaat gcggcgacgg gcgatggccc caaaaatcac
     5941 tgccgcactg atgcctgcat tgggcagcat taagccgatg cgttcgcctt caacactgta
     6001 tttttcaagg atgcgtccaa caaacagcgt tttcgtaagc aatttgcgat aggagtctgg
     6061 ggtaaagttg acgtcttcga cacatttctt cccggctccg aagcggtaca ttgcactcag
     6121 taaagattcg tacagcgttt cacgcgggcg caccgccatt cgcgcttcca tcattatttg
     6181 atgcagcatt tcgccagcga ttttgcgacg gtcacgggca cgcggcgcat ccggcatctc
     6241 cacctgcgtt ggtggcaaaa tatgcagagt aatttgcggg aacaagcgac gtttaaccag
     6301 acctttcagg cggctgaagt gcgtgagttc cgccccttca atacgcacag gaataaccgt
     6361 tgcaccagac ttcgccgcga caaaacccgc gccatcgtag attttcatca gcgagcctgt
     6421 agtggtgatg cgtccttcag ggaaaatcac cactggtcgg ccctgttcca ccagacgtac
     6481 cagatgttta atagccatag gttgcgtcgg gtcgagagga acaaagtcga taaatgattt
     6541 cagacaacgc atataccact gttggcttat tgaggtgtaa acggcaaaca ctggacgcac
     6601 aggtaaaaac agtccaagca aaatgccatc aataaaagag acgtgattag gcgtaattag
     6661 aacgcgctcg cccttcagtg cctgggtgtc acccgtaacg cgaacgcgat acaaaacacg
     6721 gcacaaattt cgaaaaaagc taaaaagcat tccaactccc tttgctctga ttcagtaaaa
     6781 gcgaatggag ggagattaca cgagataaag aacgcgagcg acagtaaatt aggtgcgaaa
     6841 aaaaacctgc gcatccgcgc aggttggtgc aagagacagg gtacgaagag cgtaccgaat
     6901 aatctcacca atcaatacct ctgggatctt gattgtggtc tgcacgacga ctcttcgcca
     6961 gcgagaaaac gcaaaggaat gaagggaaat gcaacgaggt gtgtaaattg tcggttactg
     7021 ttacagattg atgaccggca aaaaaaaacc tgcgcatctg cgcaggctgg tgtaattcat
     7081 gtgctcaacc cgaagttgac ttcacctatc aatacctctg ggatcaccac tttagcaacc
     7141 tgaagccaaa cgccaccagc ggtcaatcgc aacagcgttt cgcaaagtgt aaccaaaggt
     7201 ttgcaatctc tttttttgtc ttacttattt gcgtttggct cacattccca cgatgaaaac
     7261 acgccacccc ttgaaccaac gggcgttttc cgtaacactg aaagaatgta agcgtttacc
     7321 cactaaggta ttttcatggc gaccataaag gatgtagccc gactggcagg cgtttcagtc
     7381 gccaccgttt cccgcgtcat taataattca cctaaagcca gtgaagcttc ccggctggct
     7441 gtgcatagtg caatggagtc tcttagctat cacccgaacg ccaacgcccg tgcgctggcg
     7501 cagcagacca ctgaaacggt cggtctgatc gttggtgatg tttccgatcc gtttttcggt
     7561 gcaatggtga aagcggtcga acaggtggct tatcacacca gtaatttctt attgattggc
     7621 aacggttacc acaacgaaca aaaagagcgt caggctattg agcaactgat ccgccatcgc
     7681 tgtgctgcgt tggtcgtcca tgccaaaatg atcccggatg ccgatttagc ctcattaatg
     7741 aaacaaatgc ccggtatggt gctgatcaac cgtatcctgc ctggctttga aaaccgttgt
     7801 attgctcttg acgatcgtta cggtgcctgg ctggcaacgc gtcatttaat tcagcaaggt
     7861 catacccgca ttggttatct gtgctctaac cactctattt ctgacgccga agatcgtctg
     7921 caagggtatt acgatgccct tgctgaaagt ggtattgcgg ccaatgaccg gctggtgaca
     7981 tttggcgaac cagacgaaag cggcggcgaa caggcaatga ccgagctttt gggacgagga
     8041 agaaatttca ctgcggtagc ctgttataac gattcaatgg cggcgggtgc gatgggcgtt
     8101 ctcaatgata atggtattga tgtaccgggt gagatttcgt taattggctt tgatgatgtg
     8161 ctggtgtcac gctatgtgcg tccgcgcctg accaccgtgc gttacccaat cgtgacgatg
     8221 gcgacccagg ctgccgaact ggctttggcg ctggcggata atcgccctct cccggaaatc
     8281 actaatgtct ttagtccgac gctggtacgt cgtcattcag tgtcaactcc gtcgctggag
     8341 gcaagtcatc atgcaaccag cgactaaccg cagttaaagc aattccagcg ccagtaattc
     8401 ttcgatggtc tggcgacggc gaatcaaccg cgcctgacca ttatcaaaca gaacctctgg
     8461 taacagcgga cggctattgt agttggatga cattgatgcg ccatatgccc ctgtatcatg
     8521 cagtaccaga taatcacctg ccttcacttc cggcaaggcg cgggtttcaa catttccccc
     8581 ttcctgctgg gtaaagacat cgcccgattc acataacggt ccggcgacga cggtttccac
     8641 cgttggcgcg tgttccagag aacgaccatc agctgccagg gcactgatat ggtggtaact
     8701 accgtacatt gccgggcgca tcagatcgtt gaacccagca tcaaccagca caaagtggcg
     8761 gctacccatt tgtttgacgc tccgcacctg agtaattaat acgccagact gcgctaccag
     8821 gaagcgaccc ggttcaattt ccagtttcac agggtggccc aaatggcggg cgatttgctc
     8881 acgcgcggca ttccacagac cataataatg ttcggtatca accgcctctt caccctgttg
     8941 ataaggaaca gaaagcccac cgcccgcaga aatagcctgt aaatcctgac cgaattcgat
     9001 gacctgacgc accatagcac cacacacctg ttccagatgg gcataatcaa cgccagaacc
     9061 aatgtgcatg tgaatgccga ccagctgcag atgatgacgt tgtatcacgt ccagtgcggc
     9121 gggcagatcg gtgtaccaga taccgtgctt gctgttttcg ccaccggtat tggttttttg
     9181 gctatgtccg tgaccaaacc ccggattaac gcgcagccat acccgatgcc ctggcgaaac
     9241 ctggcccagt tggtcgagca tatcaacaga acccgcattc accggaattt gcaattcact
     9301 gacgcgttca agcgtcgcct gatcgataac atctgccgta aaaacaatat catcggggtg
     9361 cgtttgcgga ttgtaacccg ccgccaacgc acgctctatt tcgcctaacg agacggaatc
     9421 cactttcacg ccctgctcac gcattaagcg caaaatatga atattggaac aggctttctg
     9481 tgcaaagcgc accacatcaa actgtttcag cgctgcaatc tgccgacgaa taatttgcgc
     9541 atcgtagacc cacaccgggc agccaaattc agcgggcaaa cgcagcagat tttcggcggt
     9601 gagatcggta tcggtgctga acagtgaatg tggcataaca aactccagat aagtgctttt
     9661 ttatgattac gccacatcat aaaaagaata aaaaatatcg atttatgtcg agtttatgca
     9721 aaaatgatat ggattaccgg attgcgagag agcgctaatg gccgccgtta acttacgtca
     9781 tattgaaatt tttcatgcgg taatgaccgc cggaagcctg actgaggcgg cacacctgct
     9841 acacacctca cagccaaccg tcagccgcga actggcgcgc tttgagaagg tgatcgggct
     9901 gaaattgttt gagcgcgtac gtgggcgatt acatcctacc gtgcaaggac tgcgtctgtt
     9961 tgaagaagtg caacgatctt ggtacggact ggatcgcatt gtcagcgccg cagaaagtct
    10021 gcgcgagttt cgccagggag aactgtctat tgcctgcctg ccggtctttt cgcaatcttt
    10081 tttaccgcag ctcctgcaac cctttctggc acgttatccc gatgtcagct taaatatcgt
    10141 gccccaggaa tcaccgctac ttgaagagtg gctctcggcc cagcgtcatg atttaggact
    10201 cactgaaacg ctccatacgc ctgcgggaac agaacgtacc gaattactct ctttagatga
    10261 agtgtgtgtg ttacctccgg gtcatccgct ggcggtaaaa aaggtattaa cgccggatga
    10321 ttttcagggt gagaactaca tcagcctttc ccgtactgac agctatcgcc agttgctgga
    10381 tcagctattt actgaacatc aggttaaacg acgcatgatc gtagaaaccc acagcgccgc
    10441 gtcagtctgc gcaatggtac gggcgggggt aggtgtttcg gtggttaacc cgctcaccgc
    10501 actggattat gcggcaagcg gtttagtggt gcggcggttc agtattgcgg ttccgttcac
    10561 cgtcagcctg atccgccccc tgcaccgccc gtcatcagcg ctggtgcagg cgtttagtga
    10621 gcatttacaa gcggggttac cgaaactggt cacttctctt gacgctattt tgtcgtcagc
    10681 tacgacagca taaaagcgac agcatcctcg gcatggatcg ccgcggtatc aaacacaggc
    10741 aaaacactgc gctcttctgg caccagtaaa ccaatttctg tgcagccaaa aatgacgccc
    10801 tgtgcgccct gttctgcaag gcgagcaatc acttgcgcat aataagcgcg tgacgcttcg
    10861 gtaaattgcc ccagacacag ttcttcaaaa ataatctgat taattttcgc ccgttcatcc
    10921 gcttcaggaa taagacaatt gatggaaaat tgttccgtca gccgcccgcg ataaaaatcc
    10981 tgttccatgg tgtaacgcgt acccagcagc gccacacgag tcattccggc cccggtaatt
    11041 gcacgtccgg tggcatccgc aatgtgtaag aaaggcagag tgcaacgtga ctcaatggca
    11101 tccgccactt tatgcatcgt attggtacat aacacaatac cttctgcgcc cgcccgctgt
    11161 aagccaagcg ccgcctcagc cagaatgtcc ccggttttat cccattcccc gcgacgctgg
    11221 cactcttcta tttcatgaaa atcgacgcta tgtagcagca cttgcgcaga gtgaagccca
    11281 ccaagccgct gtttaatgcc ttcatttatc agacgatagt aaggaatggt ggattcccag
    11341 ctcattcctc ccagcaaacc aattgttttc attcctctct cctgatgtgt gttaccgcaa
    11401 caaggctgaa taaggaacga gacaaacgcc tcaacggcca ggtgcccgat ctctattaac
    11461 gaaaaaaggg ccggatgtac agcacatccg gcccgtgaaa tcagacgccg atatttctca
    11521 acttctcgcc tgccatcagt ttgcgttcga tatgttccag cgtgacattt ttggtttccg
    11581 gaatgagcca gaaagtgatg cccacaaacg caatgttcag cgcagtgtag agccagaacg
    11641 taccggcagc gccaatgcta tcaagcagtg tcaggaaggt cgcgccgata atcatattcg
    11701 acacccagtt tgtcgtcgtc gaacaggtaa taccgaaatc gcggcatttc agcggctgaa
    11761 tttcagagca caggatccac accactggcg cggcgctcat cgcataaccg gcaatacaca
    11821 tcatcgtcat gccaacagag agccaggaca agccactgga agccgtaccg ttatcaaact
    11881 gcatcaggca atagcccagc accagagtgc ctaacgccat cacgctgaaa ccaattttca
    11941 gagccggttt acgacctgct ttatctaccg taaagaccgc aatgaaggtc gcgaacataa
    12001 aggtcagtcc cacgaccaga gtcgcaatca tctgttgttc tgtggtcgta aagcccgcca
    12061 ttttgaagat acgcggcgca tagtacatga tgatgttcat accggtaaac tgctgcatcg
    12121 cctgcaacaa cataccgaga aacacagcac gacggacgtt acggttgatc ttaaacagtg
    12181 cccaaccgcc ttgttttaac ttcaggcttt cacgaatttc gttgagttct tctcgcgctt
    12241 tttccgacgt atcgcgcagc atacgcaaca cttcttccgc ctcaatatga cgcccctttt
    12301 ccgccagcca gcgcgggcta tttggcagga agaccaccag aataatcagc aggactgctg
    12361 gtaaagcaag aacccccaac attgcgcgcc agttaccgct ataactgaac gctgtatcgg
    12421 ataaaaacgc cagcacgatg ccgagtgtga ccatcaactg gtacatactg atcatcttac
    12481 cgcgaacgtt ttcacttgcc atttcagaaa gatacagagg agcggtgtaa gacgcgatcc
    12541 cgacagcaat gcccagcacc acacgagcgg cgattaacat ctctacgctg gtcgcaaaag
    12601 cggaccctat agaaccgagt acaaacagga tggcccccgc catcaggctg tatttacgac
    12661 ccaggcggaa cgacagccaa ccattaaaca gcgcaccaat tgctgcgccg agcatcatgc
    12721 tactaaccac ccattcctgc aaacgactgg tcagcacaaa gtgatcggta atgaacggca
    12781 acgctccggc gattacgccg atatcaagac caaataacaa tcctgcgacc gcagcagcta
    12841 ccgaaacaaa catattcata cgccgcgtat cccgcaaaga acgtggcgtt aaagcagatt
    12901 ccgtattgat agtaaccatt ttttcctgcc agcagagagt aagacatagt gaaaaaatac
    12961 gtgaacaact cacgcaggtg tcaggtcgga aacagcataa atatggatta aattgctgcg
    13021 acatgtcgtt atgtgatgga tattccaatt ttcaa
//
LOCUS       DAPGWB010000123        12984 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.124, whole genome shotgun sequence.
ACCESSION   DAPGWB010000123 DAPGWB010000000
VERSION     DAPGWB010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12984
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.124"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            55..654
                     /locus_tag="RHX79_003423"
     CDS             55..654
                     /locus_tag="RHX79_003423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000905087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDV2198558.1"
                     /translation="MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPG
                     LKRALKRLQKGDTLVVWKLDRLGRSMKHLISLVGELRERGINFRSLTDSIDTSSPMGR
                     FFFHVMGALAEMERELIVERTLAGLAAARARGRTGGRRPKLTKEQHEQIARLIKNGHD
                     RKQLAIIYGIGTSTIYRYHPVGDIQTEETTGQTQENENR"
     gene            complement(683..1171)
                     /locus_tag="RHX79_003424"
     CDS             complement(683..1171)
                     /locus_tag="RHX79_003424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001761054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2198559.1"
                     /translation="MMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIG
                     AGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGRPWPLIDGVGQIYGMYVLTETNTTR
                     SEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSVKG
                     LF"
     gene            complement(1184..3991)
                     /locus_tag="RHX79_003425"
     CDS             complement(1184..3991)
                     /locus_tag="RHX79_003425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000853438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDV2198560.1"
                     /translation="MKTLDIRVAFSAVDRLTRPAENARRLMGQFGDSIQRTQGAIKNL
                     ERQARSFERARDAVSKADAGIVKARRQLNALNQLQRTGTVLSEKQQKLMQQLSTRLER
                     LNESRTREIQKMRELGGELKRHGISLTGSDNTIQQAIRRTEQYNNQLERERQALARVT
                     RARERYSRAQETAGKLKTGGALAIGAAAAGGYAAGRFLQPAIGFGKEMSRVQALTRID
                     KNSLQFKALREQALKLGSETQFTAGDAASGQAFLAMAGFTPQAIQAALPGVLSMATAG
                     GMDLGETADIGSNILTQFGLSADQMDRVGDTLTAAFTRTNTDLRALGETMKYAGPVAG
                     KLGISLEQAAAMAGVLANMGIRGSDAGTAMRASLARLASPPKAAAEALKELGVSVSDA
                     GGKMRPMEDVLADLYKATRKYGEVDRVSFFKDIAGEEAFTSFMALVDAAGDGSLPKLR
                     KELEGARGEAERTAKVMANNLDGDLKSLSSAWEGLRIRIADLIDGPLRSVTQWLTRVV
                     SKVTALAQAHPALTRQLLIAGGALLAMTVTVGSLSLAIGVLAGPLAKLRLGFSLLTGS
                     MNAVRVLPALWGMVTGSVSLLGGAIGALFSPVGLIVAALAGAAVLIWKYWDPIRAFFA
                     GVFSGIMERLTPLRETFERFGPVFDAIGSGISQVFNWFKSLLSPMESSKETLDKCTSA
                     GEIFGNVLGGALQLVLTPAKMLLDTLAWILEKLGVLPDEAERARKKIEDAQRAAILQD
                     KVALLQGDLAKINPPKPVENGNGTGGDNPKDNKPLTDSNTGTLRRLSKIADNTGKLVE
                     ETKKRIGPGDIVFKNLPRALAVRGEWQERKIAQVSKPAPAINITPVVPAPLPPALVPV
                     VAASSRPVAEAIRSPVASVPVTSRNREPVASGFGGEIHVHLHNVVTQNPRELAKLVGE
                     MVRAEMERRARAGRGSFYDKD"
     gene            complement(3978..4133)
                     /locus_tag="RHX79_003426"
     CDS             complement(3978..4133)
                     /locus_tag="RHX79_003426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000333494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDV2198561.1"
                     /translation="MCFEHIEDLVADIAAIFNWSPAEIFMMTPGEVVSWRERAALRSG
                     NADNEDS"
     gene            complement(4142..4516)
                     /locus_tag="RHX79_003427"
     CDS             complement(4142..4516)
                     /locus_tag="RHX79_003427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000651574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2198562.1"
                     /translation="MKDIDTETRNNTVADDVTAGEDMAVERGVKLSRPIERGAEKITY
                     VEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLC
                     AVAVNFMSEPDSGAKSVQETAA"
     gene            complement(4572..5084)
                     /locus_tag="RHX79_003428"
     CDS             complement(4572..5084)
                     /locus_tag="RHX79_003428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDV2198563.1"
                     /translation="MAVPKHLRFFTLFVDGENEVGKVTSVTPPKLTRKTDSYRGGGMM
                     GAVSIDLGLDDSALDASFVMGGAVRALFLKYGGTIDGTLLRFAGEYYTDAESDLYEIE
                     MRGRVTEIDMGEAKQGEATSHTYAVKNTYYKLSVNDRPLWEIDLLNHIYRKDGKDIVP
                     DRIRSALGLG"
     gene            complement(5084..6268)
                     /locus_tag="RHX79_003429"
     CDS             complement(5084..6268)
                     /locus_tag="RHX79_003429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath family protein"
                     /protein_id="HDV2198564.1"
                     /translation="MSETRFHGARVTESTDLVTAINDVDSSVIGIVATADDADAKLFP
                     LNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEDGKTQDQLV
                     IGGSEDDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCLIAGKLRAFVY
                     ASCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNPKSGENETFPAPAYACGLRAYID
                     HEQGWHKSLSNVPVKNVLGMSRHVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNR
                     TPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVISAIRAKLDSLVTAG
                     KLIGAECWYDVVDNGTTDLRQGRVRIRYKYTPVPPLEDMELYQTFTDEFFGPAFAVLG
                     GA"
     gene            6426..7535
                     /locus_tag="RHX79_003430"
     CDS             6426..7535
                     /locus_tag="RHX79_003430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HDV2198565.1"
                     /translation="MTDTTMQLLSQGTDPVKMPDFDILAESKTLSGVAERLMSLSLTD
                     NRGFEADQLTITLDDADGQLQLPPRGARLTVLIGWKGEPLTEKGTYIVDEIAHEGPPD
                     RLTVSARSADFRDEFNVKREVSWHDVTVERVVSAIAHRYGLKPQISEMLMDIEIDHAD
                     QTEESDMSFLTRMAEMLGAITTVKSGNLLFIMPGGGVNAQGQPLPSFAITRSSGDRHQ
                     FRIADREAYTGVRAYWLDLNYGKKKKVSVKRRKPPQPKKEKSSSREGDYMEGAEGNVF
                     VLRKTYQNEQAARRAAAAKWQQLQRGAASFSITLARGRAELYPEMHGTVTGFKSEIDN
                     QDWIIAKAEHTIDNSGFTTQLELEAKIPEWIAETE"
     gene            7578..7838
                     /locus_tag="RHX79_003431"
     CDS             7578..7838
                     /locus_tag="RHX79_003431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HDV2198566.1"
                     /translation="MFRCPLCGASARIRTSRPENDSNTVRQKYYQCNNLECGVCFSTL
                     EAFHKFTSKHASGVHSSEGIPWHELPASHRGNNQMSLPLPQN"
     gene            8028..8168
                     /locus_tag="RHX79_003432"
     CDS             8028..8168
                     /locus_tag="RHX79_003432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hok/Gef family protein"
                     /protein_id="HDV2198567.1"
                     /translation="MSQKSLTAITFCVTVILIIWMLHGSLCEIRMSFWGAEFAAFLQC
                     KQ"
     gene            complement(8358..8639)
                     /locus_tag="RHX79_003433"
     CDS             complement(8358..8639)
                     /locus_tag="RHX79_003433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_305382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198568.1"
                     /translation="MRCGLLMAICLCLVSFSGYAATGKSDAQIKKEIIKESIESYPGN
                     CACPYNHARNGSRCGGRSAYSRTGGYDVVCYESDVTDEMIRQWKQENAE"
     gene            complement(9180..9266)
                     /locus_tag="RHX79_003434"
     tRNA            complement(9180..9266)
                     /locus_tag="RHX79_003434"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9230..9232),aa:Leu,seq:taa)
     gene            complement(9279..9352)
                     /locus_tag="RHX79_003435"
     tRNA            complement(9279..9352)
                     /locus_tag="RHX79_003435"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9318..9320),aa:Cys,seq:gca)
     gene            complement(9407..9482)
                     /locus_tag="RHX79_003436"
     tRNA            complement(9407..9482)
                     /locus_tag="RHX79_003436"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9447..9449),aa:Gly,seq:gcc)
     gene            complement(9634..10182)
                     /gene="pgsA"
                     /locus_tag="RHX79_003437"
     CDS             complement(9634..10182)
                     /gene="pgsA"
                     /locus_tag="RHX79_003437"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDV2198569.1"
                     /translation="MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAV
                     TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE
                     IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVA
                     AVLTLWSMLQYLSAARADLLDQ"
     gene            complement(10239..12071)
                     /gene="uvrC"
                     /locus_tag="RHX79_003438"
     CDS             complement(10239..12071)
                     /gene="uvrC"
                     /locus_tag="RHX79_003438"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310678.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDV2198570.1"
                     /translation="MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLS
                     SYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSY
                     PFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR
                     NRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETAS
                     QNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKV
                     LGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLS
                     ELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEV
                     KRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRY
                     GKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLET
                     LFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGP
                     KRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH"
     gene            complement(12068..12724)
                     /gene="uvrY"
                     /locus_tag="RHX79_003439"
     CDS             complement(12068..12724)
                     /gene="uvrY"
                     /locus_tag="RHX79_003439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrY/SirA/GacA family response regulator
                     transcription factor"
                     /protein_id="HDV2198571.1"
                     /translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCR
                     TNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYL
                     SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLM
                     ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ
                     "
BASE COUNT         3219 a         3591 c         3155 g         3019 t
ORIGIN      
        1 tggccgtttc tggcctgcat ggcatgattt gcgcttttgg acgggagatt cagtgtgctg
       61 attggctatg taagggtatc aacaaatgac cagaatacag acctgcaacg aaacgctctt
      121 gtttgtgcag gatgtgaaca aatatttgaa gataaattaa gcgggacaaa gacagaccga
      181 ccgggattaa aacgcgcttt aaagcgcctt caaaaaggtg acacgctggt tgtctggaaa
      241 ctggatcgcc tcgggcgaag catgaaacat ctgatttctc tcgtcgggga actacgggag
      301 cgagggatta attttcgcag tctgaccgac agcatagaca catcttctcc aatggggcgt
      361 tttttcttcc acgtgatggg tgccctggct gaaatggaac gtgaattaat tgttgaacgt
      421 acactggccg ggctggcggc agcgcgcgca agggggcgca caggcggacg tcgaccgaag
      481 ctgacaaaag aacagcatga gcaaatagca aggctaatca aaaacgggca cgacagaaaa
      541 caactggcaa taatttacgg cattggcaca tcgacgattt atcgttatca ccctgtaggc
      601 gatatacaga ctgaagaaac aaccgggcag actcaggaaa atgaaaaccg ctaatctgac
      661 cattagcggt ttttgtgtta aatcagaaca gccctttaac tgaactggcc gcgctgttaa
      721 gagatgatgt caccttatct ttgaagccgg acagcatatc actgaacgat gaggattgca
      781 ggcgctcccg caaatcctca tcacagcgtt caagagtcag tgaaaattct atctttttcg
      841 ccttaccgta gcgatcaaac tcggagcggg tcgtattcgt ttcagtcagg acatacatgc
      901 cgtaaatctg cccgacgcca tcaatcaaag gccagggtcg tcctgtatac gcctgcgtgg
      961 tcagcagcga cagcgacact tcgccacctg taatttcagg ataaagcaca ccagaaagaa
     1021 cgatgcgatc atcacctgca ccgatatact gccagcttgc tgaacggtta acgcgttcat
     1081 ttttcacatg ccgccagctt ttgttttgct gtaactgctg atgcggcagc gtgcgcagct
     1141 caaaaacaaa catgccgtag atcatcatca tggccatgac tcctcaatct ttatcgtaaa
     1201 aactgccacg cccggcacgg gcgcgccgtt ccatttctgc cctgaccatt tcaccgacca
     1261 gtttcgccag ttcgcgggga ttctgcgtaa caacgttatg cagatgaaca tgaatttcac
     1321 caccaaatcc ggaggcaaca ggctcccggt tacgggaagt tacaggaact gatgccactg
     1381 gagatcgtat agcctccgcc accgggcggg agctggccgc aacaacaggg accagcgccg
     1441 gaggcagcgg agccgggacc acgggtgtga tattaattgc gggggcaggc ttactgacct
     1501 gcgcaatctt ccgctcctgc cactccccac gaacagcaag tgctcggggc aggtttttaa
     1561 agacaatatc gccggggcca atgcgttttt tcgtctcctc aaccagctta cctgtgttat
     1621 cagcaatttt gctgagtctg cgcagcgtac cggtattgct gtctgtgagc ggtttattgt
     1681 ctttggggtt atcacctccg gtgccattgc cattttccac aggcttcggc ggattgattt
     1741 tcgccaggtc cccctgaagc aaggcaacct tgtcctgaag aatggccgca cgctgtgcgt
     1801 cttcgatttt cttgcgcgcc ctttccgctt catccggaag cacaccaagc ttttcaagta
     1861 tccacgccag cgtatccagc aacatttttg caggtgtcag aacaagttgt aacgcaccgc
     1921 caagaacgtt accgaatatc tcgccagcac tggtacattt atccagcgtt tccttgctgg
     1981 actccatcgg tgacagcagc gatttaaacc agttaaacac ctggctgatc ccactcccga
     2041 ttgcgtcaaa aacaggacca aaccgttcaa aggtttcgcg caacggggtc agcctttcca
     2101 taatcccgct gaacaccccg gcaaaaaatg ccctgatggg atcccagtat ttccagataa
     2161 gaacggcagc tccggcaagc gcagccacga taagaccaac cggactgaac aacgccccga
     2221 tagcgcctcc cagtaaagaa acggaacccg tcaccattcc ccatagtgct ggcagaaccc
     2281 tgacagcatt cattgatccg gtcaggaggg aaaaaccaag acgcagtttt gccagcgggc
     2341 cagcaagcac accaatagcc agcgacaacg agccaaccgt tacagtcatt gccagcagtg
     2401 caccgcctgc aatcagtagc tggcgcgtca gtgcgggatg ggcctgcgcc agcgccgtca
     2461 cctttgatac cacacgcgtg agccactgcg tgacagaacg cagcggaccg tcaatcagat
     2521 ctgcaatgcg gatgcgcaac ccttcccatg cactgctgag tgatttcaga tcgccgtcaa
     2581 ggttgttggc cataaccttt gccgtgcgtt cagcctcacc gcgcgcgcct tcaagttctt
     2641 ttctcagttt gggtaaggag ccgtcacctg ccgcatcaac gagggccata aatgatgtga
     2701 aagcctcttc tccggcaatg tccttaaaga acgatacccg gtcaacttcc ccgtatttgc
     2761 gggtagcttt ataaaggtca gccagcacat cctccatcgg gcgcattttg cccccggcat
     2821 ccgagacaga cacgccaagc tctttcagcg cctctgctgc cgcctttggc ggtgatgcca
     2881 gacgagccag gctggcacgc attgccgtac cagcatcact ccccctgata cccatattcg
     2941 ccagcacgcc cgccatcgct gcggcctgct ccagcgatat tcccagctta cccgccaccg
     3001 gacctgcata tttcatggtt tcacccagtg cgcgaaggtc agtgttggta cgggtaaacg
     3061 ctgcggtgag tgtgtcgccg acccggtcca tctggtcagc agaaagaccg aactgcgtca
     3121 gaatatttga gccaatatcc gccgtctcac cgaggtccat accgccagcc gttgccatgc
     3181 tcagtacgcc agggagcgca gcctgaatgg cctgtggtgt aaagccagcc attgcaagaa
     3241 atgcctgccc actggcggca tcgcctgcgg tgaactgcgt ttcagagccc agttttaacg
     3301 cctgctcacg cagcgcctta aactgcaggc tgtttttgtc gattcgcgtc agtgcctgaa
     3361 cgcgggacat ctctttcccg aacccgatcg caggctgcaa aaaacgcccg gcagcatagc
     3421 cgcccgccgc tgccgcacca attgccagcg caccacctgt tttcagtttt cccgctgttt
     3481 cctgcgcgcg cgaataccgc tcacgcgccc gcgttacacg cgcaagcgcc tgccgttcgc
     3541 gttcaagctg gttgttgtac tgttcggtgc gtctgatggc ctgctggatg gtgttatcgc
     3601 tgcctgtcag ggaaatgccg tggcgtttca gctctccgcc aagctcccgc attttctgaa
     3661 tttcccgtgt gcgcgattca ttcaggcgtt caagccgggt gcttaactgc tgcatcagct
     3721 tttgttgttt ttcgctgagc actgtacccg tgcgttgtaa ctgattaagg gcgttaagct
     3781 ggcgtcgtgc tttcacgata cccgcatccg ctttactgac agcgtcgcgg gcgcgctcaa
     3841 atgaacgcgc ctgacgctcg agatttttga tcgccccctg cgttcgctgg atggagtcac
     3901 caaactgccc catcaggcgg cgggcgtttt cggcaggccg ggtcagcctg tcaacggcgc
     3961 tgaaagcgac ccggatgtca agagtcttca ttatctgcat tcccgctgcg aagtgccgcc
     4021 cgctcacgcc agctaaccac ttcgccgggc gtcatcatga agatttcggc gggcgaccag
     4081 ttaaaaatgg cggcaatatc cgccaccaga tcttcgatgt gctcaaagca caccagggtg
     4141 attacgctgc cgtctcctgc acgctcttcg cgccagagtc tggctcgctc ataaaattta
     4201 cagccacagc gcacaactga ataaaatcgc gtgacgacat ttttttaatc atcacttcat
     4261 ccagtcgtgg cgaagtcacg cgaggcaaca gcgtgaacat ggtatccgct ttcagattca
     4321 gcacatcaga cagcgacaga ccacgcaggg atcccgcctg ctcaatagcc ccggtgattt
     4381 ccacatatgt gattttttcg gcaccacgct caattggccg ggaaagtttt acaccacgtt
     4441 cgacagccat atcctcacct gccgtcacat catccgctac ggtgttattc cgggtttcag
     4501 tatcgatgtc tttcatcagt tgtctccttt tcagtcagag gcgacgcact gcgccgcctg
     4561 catattactt atcagccaag cccaagcgcg gagcgaatgc ggtcaggcac aatgtccttg
     4621 ccgtccttcc ggtagatgtg gttcaacagg tcgatttccc acagcgggcg atcgttaaca
     4681 ctcagcttgt agtatgtgtt tttgacagcg tatgtgtgtg atgtggcttc gccctgtttg
     4741 gcctccccca tatcaatttc cgtcacacgc ccgcgcatct cgatttcata cagatcgctt
     4801 tctgcatcgg tgtaatattc acccgcaaaa cgcagcagcg tgccgtcaat cgtgccgcca
     4861 tacttaagga acagtgcacg aacagctcca cccatgacaa aactcgcatc aagcgcggag
     4921 tcgtccagac cgagatcaat acttaccgcc cccatcatgc caccaccacg ataactgtcg
     4981 gttttgcgcg tcagtttggg cggcgtgacg gatgtcactt tacccacttc gttttcacca
     5041 tccacaaaca acgtaaaaaa gcgaagatgt tttggtacag ccatcaggca cctcccagca
     5101 ccgcaaatgc gggaccaaag aattcatcag taaacgtctg gtaaagctcc atgtcttcca
     5161 gagggggaac gggcgtatat ttgtagcgaa tacgcacacg cccctgacgt aaatccgtgg
     5221 tgccgttatc caccacgtca taccagcact ccgcgccaat cagtttcccg gcagtaacca
     5281 gtgaatccag ttttgccctg atggcactga taacatcctt cacgttcgca ggcgtcagtg
     5341 gactgtcgat ggtttcaaac tgcgcttccg caattgaatc agccagcacc tgtgcggttc
     5401 gggtatacac ctcaaagatg taggcgttcg tttccggtgt gcggttgccc cagaagcgga
     5461 acccattgcg acgaataatg gtcgtgattt ctttgttgtt gaggctgttg gcatcgctgt
     5521 cttcggcctg caacgaccag aacacatgcc tcgacatccc cagcacattt ttaaccggaa
     5581 cgttggacag tgatttgtgc cagccctgct catggtcaat gtacgcacga aggccgcacg
     5641 cataggcagg tgcggggaac gtttcgtttt cgccactttt cgggttgtag gcgatgaagt
     5701 ccggccataa gagcatcacc tcacgttcgt tgaatttctg gcggtaggta atcgcctcag
     5761 ccatcgtgtt acagccgtga catgaggcat acacaaacgc gcgcagttta cccgcaatca
     5821 agcacaggga ttttgttaca gcctccgtgt ccagctccgg cgcggccaga atacgcggac
     5881 ggtatccgat gctttcatcc tgctctgcaa caagcagcgc atacatcccc gtatagctgc
     5941 cgtcatcctc agaaccaccg ataaccagtt gatcctgcgt ctttccgtct tcttctttgt
     6001 gttcagccac gcgaacgacg atcacctttg tgctcacctg gtctgcgatg gccttaagcg
     6061 cacgataaag cgtccccgtt gtcccgcatt ttcccagcac gtcattgacg cgggtcagca
     6121 gtgtgggctt gttcagcggg aacagcttcg cgtccgcatc atccgccgtt gccacgatac
     6181 cgataacgct ggaatcaaca tcgttaatcg ctgttaccag gtcggtactt tccgtaacac
     6241 gggcaccatg aaaacgagtt tcactcatag cttcagcccc ttgtatccgt taaatgattc
     6301 ggcaacaatc atcacccacc acgcgcgtaa tctcacccct gcgccgttct cccgccacgg
     6361 cgacaacaaa aagcagtaac cccctccgca cgcacatgcg accatgccgc acagggaggg
     6421 aacagatgac cgacaccacc atgcaattgc tcagtcaggg cacagacccc gtgaaaatgc
     6481 cggattttga tattctcgcg gagagtaaaa cgctgtcagg cgtggcagag cgcctgatga
     6541 gcctgtcact gaccgacaac cggggatttg aagcggacca gctcaccatc acgctggatg
     6601 atgcggatgg tcagttgcag ctaccgccac ggggcgcgcg cctgacggtt ctcattggct
     6661 ggaaaggaga accgctgaca gaaaaaggca cttacattgt tgatgaaatc gctcacgaag
     6721 gaccgccgga caggctgact gtttcagcca gaagcgcaga tttccgggat gaatttaacg
     6781 ttaaacgtga ggtgtcctgg catgatgtga ccgttgagcg tgtggtatcc gccatcgctc
     6841 atcggtatgg tctgaaaccg caaatcagcg aaatgctgat ggatatcgaa atcgaccacg
     6901 ccgaccagac cgaagaaagc gacatgtcct tccttacgcg catggcggaa atgctgggcg
     6961 caatcaccac ggtaaaaagc ggtaatctgt tattcatcat gcccggcggt ggcgtgaacg
     7021 cacagggcca gccgttgcca tcgttcgcca tcacacgcag tagcggcgat cgccatcagt
     7081 tccgcattgc tgaccgcgag gcgtatacgg gggtacgcgc ttactggctt gatcttaatt
     7141 acgggaaaaa gaaaaaagtc agcgtgaaac gccgcaaacc gccacaaccg aaaaaagaga
     7201 aaagcagcag ccgtgaaggt gattatatgg aaggcgcgga aggcaatgtg tttgtgttac
     7261 gcaagactta tcagaacgag caggcagcaa gacgcgcagc ggcggcaaag tggcaacaac
     7321 tacaacgcgg agccgcatca ttctccatca cgctggcacg tggacgagca gaactctacc
     7381 ccgaaatgca tggcacggta acaggattta aaagcgagat tgataatcag gactggatta
     7441 ttgcaaaagc cgagcacacc attgataaca gcggctttac cacgcagctt gagcttgagg
     7501 caaaaatccc ggaatggata gcggaaacag agtgagcaac ttagaatagc ggcagcacca
     7561 cgttaaagga ggtcgctatg ttccgttgtc cgctttgtgg cgcatctgcc cgtatccgca
     7621 ccagtcgtcc ggaaaatgat tcaaacaccg tgcggcaaaa gtattaccag tgtaacaacc
     7681 tggaatgcgg cgtatgcttc tcaacactgg aagctttcca taaattcaca tcgaaacacg
     7741 cctccggcgt tcactcatca gaaggtatcc cgtggcatga gctgccagct tcacacaggg
     7801 gaaacaatca gatgagtttg cctttacctc agaattaaca ggcagaattg ccggagtaac
     7861 aaaaaagcga tagattacgt gcgggtgcct ttcggctgat ggtcggaggg aatacccgaa
     7921 ggccggatgt ggaaaggccc cggaaaacat ttctgtttaa ccgaggccct aacccgtcaa
     7981 cctagcaagt gataggttag cgcctctcca acaaaggagc aagcgctatg tcgcaaaaat
     8041 cgcttacggc catcacgttc tgcgtgacgg taatcctcat catctggatg ctgcacggtt
     8101 cgctgtgtga aatacggatg agcttctggg gagcggagtt tgcggcgttc ttacagtgta
     8161 agcagtaagg aaaccgcgac ggggaggcaa ctccccgtca atcggttgct agggtaaggc
     8221 cgataaggca ccctatctca taggcatgaa taacaacccc gcagcgtaaa aactgcgggg
     8281 tttctttttg gaactctcac tagctagtga gccgttaact gcacataatg ctcgcacaac
     8341 aaatcagtta aaagagatta ctcagcattc tcctgcttcc attgccggat catttcatcg
     8401 gtaacatcac tttcataaca taccacgtca taccctccag tacggctata tgcactgcgt
     8461 ccaccacatc tactaccatt ccttgcatga ttatacggac acgcacaatt gcctggataa
     8521 gattcaatgg attctttaat tatttctttc ttgatctgag catctgactt tcctgttgct
     8581 gcatacccac taaaagatac caaacaaagg cagattgcca ttaataaacc acatcgcata
     8641 ccgatacact ctattactaa ccaatcatag cccacatcat aaaatcgaga tgaggagtac
     8701 aacaccttta acaagaaggt gccatcacga taatatgccg tgcaattcat caaaaaaaag
     8761 atctatatca aagagataga gttattatca gtgctgcaga catcagcatt cgaggcagca
     8821 gaaagacagt aaatctaacg aatttgtctt tttctcagga tgttgtcaga ttaaaaaaga
     8881 tagagtagcg cagacacctt ttggtggatg gtaggaggaa aaatgaagtt gagtgggaag
     8941 atcccagaaa aaactttggt ttaaccaagg ccctagttca atatgcgaaa tgcagatgag
     9001 ttgcaggaga gttttgcttc acccttagag tttaaacaga cgtgtactat cattatttct
     9061 gcatatcgcc acaccatcgc cactttaccg ccatttaaca aaatacaaat acaaaaaaac
     9121 cacccgaagg tggtttcacg acactgctta ttgctttgat tttattctta tctttcccat
     9181 ggtacccgga gcgggacttg aacccgcaca gcgcgaacgc cgagggattt taaatccctt
     9241 gtgtctaccg attccaccat ccgggctcgg gaagaaagtg gaggcgcgtt ccggagtcga
     9301 accggactag acggatttgc aatccgctac ataaccgctt tgttaacgcg ccaaattctt
     9361 caggcctttc agccagacat ccgcttgacg ccgatgtctt ttaaactgga gcgggaaacg
     9421 agactcgaac tcgcgacccc gaccttggca aggtcgtgct ctaccaactg agctattccc
     9481 gcattcatca agcaatcagt taatcacttg attttattat cgtctggcaa tcagtgccgc
     9541 cgttcgatgc gttgcattct acttacctgg cgcgatgagt caacgatatt tttcaccact
     9601 tttgatcgtt tgctgaaaat tacgccgaaa cgatcactga tcaagcaaat ctgcacgcgc
     9661 agcgctcaaa tattgcaaca ttgaccacag agtcagtacc gcagccacaa agaaaagtgc
     9721 aataccggcg tactcaaccc aaatgttcgg acgccacagc agccatgcca acgccaccat
     9781 ctgggcagtg gttttcactt tcccaatcca ggagacggcc acgctactgc gtttacccaa
     9841 ctccgccatc cattcgcgta gcgcagaaat aataatttca cgggcgatca tcgttgccgc
     9901 cggtaatgtc acccaccagc tgtgataatg ctcggttacc agcaccatgg cgatagccac
     9961 gagaacttta tctgccacag ggtcaaggaa agcaccaaac cgggtactct ggttccagcg
    10021 gcgtgccaga aaaccatcga accagtcagt caccgccgcg acgcagaaaa tgagcgcggc
    10081 ggcaaacggc gaccaggtga caggcagata aaagaccaat acaaagaatg ggataaggat
    10141 gacacggaac agtgtaagca acgtagggat attaaattgc ataatgacgg gtaactatct
    10201 gttgtcagta agattacccc tatgttgcta cagagacatc aatgtttcaa cgaccagaag
    10261 atcttttctg ccagaccttg cgaaataccc ggcacttttg caatttcctc gacgctggcg
    10321 ttacgtaaac cttgcaaacc gcccatatat ttcaacaaca tttgccgacg ttttggcccg
    10381 acgccttcaa tggtttccag ggaactggta tttttgacct tcgcccgttt tttacggtgc
    10441 ccgccaatcg cgtgatcatg tgattcatcg cgaatatgct ggataacatg cagcgcgggt
    10501 gaatctggcg gcaaactaaa tccctcacct tccggctcaa agaacagcgt ttccagtcca
    10561 gccttacgat ctgctccttt ggcaacgcca agtagcagcg gatgattttt atcccatgag
    10621 acatccagtt cggcgaagac atttttcgcc tgcgcaagct ggcctttgcc gccgtcgata
    10681 aggatcacat ccgggatctt actgtcgtca atggctttac cataacgccg acgcagcacc
    10741 tgattcatcg ccgcataatc atcgcccggc gtgatgcctg taatgttata gcgccgatac
    10801 tccgcacgca gcgggccgtt agcatcaaac accacacagg aagcgacggt ttgttcgccc
    10861 atggtatggc tgatgtcaaa gcactccatc cgcttcactt ccggcaattt caacacgctg
    10921 gcaagcgcgg tcagtcgctg gtgaacggta gattgctgcg aaagtttgct ggttaaggcc
    10981 gtcgccgcat tggtgcgcgc gagtttcaga taacgcgccc tatcgccgcg aggtttggtt
    11041 tgaacattaa tcttgcgtcc cgccagttct gaaagggaat cggcgagcag cgttttatcg
    11101 ctaagattaa aatcgagcag gatctcaccc ggtaaggtgc gcatctggct gccttgtaaa
    11161 tagaactggc ctacgaaggt ttctaccacc tcgctcagtt ccgtaccgcc aggcactttc
    11221 gggaaatagc tgcggctgcc gagcactttg ccctgacgaa tgaacaatac gtggacacaa
    11281 gccatgcccg catcgaacgc cacaccaata acgtcgaggt cgtcgccggt attggaaacg
    11341 aattgttttt cggtgacgcg tcgcaccgcc tgaatttggt cgcgaatacg tgcagcttct
    11401 tcaaactcca gattctggct ggcagtttcc atacgactaa tgagttgcgt aagcacctga
    11461 tcatctttgc cagacaaaaa caggcgcaca tactcgacct gctgagcgta ttcttcttca
    11521 ctcaccagtc cttcaacgca cggtcccaga cagcgcccta tctggtattg cagacacgga
    11581 cgcgagcgat tgcgataaac actattttcg cactggcgaa tggggaaaat cttttgcagt
    11641 agcgccagag tttcacgtac ggcatagcca ttcgggaacg ggccgaaata ttcacctttg
    11701 gcatgcttcg caccacgatg catcgccaga cgcgggtggg tatcaccact caggaagata
    11761 aaaggatatg atttatcatc gcgtagcaaa acgttgtaac gcggctgata gagtttgatg
    11821 tagttgtgtt ccagcaacag cgcttcggtt tctgtgtgag taaccgttac atcaatttgc
    11881 tggatctggg cgaccagcgc ttcggttttg cgcgaagcga ggttgctacg gaaatagctg
    11941 gaaagccgtt ttttcaggtc tttcgctttg ccgacataga taaccgtacc accagcatcg
    12001 tacatgcgat aaacgcctgg ctggctggtt acggttttta aaaacgcttt tgcgtcaaac
    12061 tgatcactca ctgacttgat aatgtctccg cattacacag accatggcga attgccaggt
    12121 gagtcagctc aacatcgcca tgaatgttta gtttactgaa catacgatag cggtagctgt
    12181 tcaccgtttt cggactgaga ttgagctgtt ctgagatctc attgaccttc tggcccttgg
    12241 tgatcatcag cataatctgc aattcacgtt cagacaaact ggcaaatggg ctttctgttt
    12301 tttctggttc gatctggctt aacgccattt gttgagcgat gtcagaagca atgtaacgct
    12361 gccctgaata gacagaacga atcgcactca cgacttcctg cggagccgcg cctttgctga
    12421 ggtagcccgc agcaccggcc tgcatgactt tcgctggtaa agggttttct gtatggacgg
    12481 taagcatgat gattttgaca tcagctgtgg aacgcgcgat tttacgcgtc gcctcaagac
    12541 cgccaatgcc cggcatactc atgtccatta gcaccacgtc aacggcattt gtccggcacc
    12601 acttaacggc gtcttcaccg cacgatgcct caccgacgac ttttataccc tttatatctt
    12661 ccagaatgcg tcgtatccct gcgcgcacca gttcgtggtc atcaacaagt agaacgttga
    12721 tcaaaggaat atctccagaa atagggataa cgctactgat agttagtcat tcgtatatta
    12781 gcggttttta ttgcaacttt gaaacgttaa aaatggtggg tattcgattt ttctctcgtt
    12841 tttgtcaatt cgattgtcca cagttatggt cacgcccgtc accaacggct taccggatcg
    12901 tttcacagta agccctacga tgaaatgtga caaaaattga ctttattcag caaaaatgaa
    12961 aatcagcccg ctgaatatgt aaca
//
LOCUS       DAPGWB010000124        12954 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.125, whole genome shotgun sequence.
ACCESSION   DAPGWB010000124 DAPGWB010000000
VERSION     DAPGWB010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12954
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.125"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            157..492
                     /locus_tag="RHX79_003440"
     CDS             157..492
                     /locus_tag="RHX79_003440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phnA family protein"
                     /protein_id="HDV2198572.1"
                     /translation="MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDAEPAQESDELIV
                     KDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMK
                     LKSEFVKKN"
     gene            652..1095
                     /gene="yjdN"
                     /locus_tag="RHX79_003441"
     CDS             652..1095
                     /gene="yjdN"
                     /locus_tag="RHX79_003441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family metalloprotein YjdN"
                     /protein_id="HDV2198573.1"
                     /translation="MPLSPYLSFAGNCADAIAYYQRTLGAELLYKISFGEMPKSAQDS
                     AENCPSGMQFPDTAIAHANVRIAGSDIMMSDAMPSGKASYSGFTLVLDSQQVEEGKRW
                     FDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ"
     gene            1228..2016
                     /gene="phnC"
                     /locus_tag="RHX79_003442"
     CDS             1228..2016
                     /gene="phnC"
                     /locus_tag="RHX79_003442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HDV2198574.1"
                     /translation="MQTIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKS
                     TLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRLS
                     VLENVLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQR
                     VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALR
                     YCERIVALRQGHVFYDGSSQQFDNERFDHLYRSINRIEENAKAA"
     gene            2041..3057
                     /gene="phnD"
                     /locus_tag="RHX79_003443"
     CDS             2041..3057
                     /gene="phnD"
                     /locus_tag="RHX79_003443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV2198575.1"
                     /translation="MNAKIIASLAFTSMFSLSTLLSPAHAEEQEKALNFGIISTESQQ
                     NLKPQWTPFLQDMEKKLGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRA
                     NGQVFAQTVAADGSPGYWSVLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVP
                     GYYVFAKNNISASDFKRTVNAGHETNALAVANKQVDVATNNTENLDKLKTSAPEKLKE
                     LKVIWKSPLIPGDPIVWRKNLSETTKDKIYDFFMNYGKTPEEKAVLERLGWAPFRASS
                     DLQLVPIRQLALFKEMQGVKSNKGLNEQDKLAKTTEIQAQLDDLDRLNNALSAMSSVS
                     KAVQ"
     gene            3125..3904
                     /gene="phnE"
                     /locus_tag="RHX79_003444"
     CDS             3125..3904
                     /gene="phnE"
                     /locus_tag="RHX79_003444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313113.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HDV2198576.1"
                     /translation="MQTITIAPSKRSWFSLLSWAVVLAVLVVSWQGAEMAPLTLIKDG
                     GNMATFAADFFPPDFSQWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWW
                     VYQPVRRLMDACRAINEMVFAMLFVVAVGLGPFAGVLALFIHTTGVLSKLLSEAVEAI
                     EPGPVEGIRATGANKLEEILYGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIG
                     VTLWEAIRGFQFQQTCALMVLIIVTVSLLDFLSQRLRKHFI"
     gene            3925..4650
                     /gene="phnF"
                     /locus_tag="RHX79_003445"
     CDS             3925..4650
                     /gene="phnF"
                     /locus_tag="RHX79_003445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism transcriptional regulator
                     PhnF"
                     /protein_id="HDV2198577.1"
                     /translation="MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAAR
                     FEVNRHTLRRAIDQLVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPT
                     SEKLLSVLRPASGHVADALGITEGENVIHLRTLRRVNGVALCLIDHYFADLTLWPTLQ
                     RFDSGSLHDFLREQTGIALRRSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDG
                     ESSPAEYSVSLTRADMIEFTMEH"
     gene            4651..5103
                     /gene="phnG"
                     /locus_tag="RHX79_003446"
     CDS             4651..5103
                     /gene="phnG"
                     /locus_tag="RHX79_003446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnG"
                     /protein_id="HDV2198578.1"
                     /translation="MHADTATRQHWMSVLAHSQPAELAARLNALNITADYEVIRTAET
                     GLVQIQARMGGTGERFFAGDATLTRAAVRLTDGTLGYSWVLGRDKQHAERCALIDALM
                     QQSRHFQNLSETLIAPLDADRMARIAARQAEVNASRVDFFTMVRGDNA"
     gene            5100..5684
                     /gene="phnH"
                     /locus_tag="RHX79_003447"
     CDS             5100..5684
                     /gene="phnH"
                     /locus_tag="RHX79_003447"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnH"
                     /protein_id="HDV2198579.1"
                     /translation="MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPL
                     NIATTSVLLTLADNDTPVWLSAPLSNDIVSQSLRFHTNAPLVNQPELATFAVTDEAIS
                     SEQLNALSSGTAVAPEAGATLILQVVSLSGGRMLRLTGAGIAEERMIAPQLPECILHE
                     LTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC"
     gene            5684..6748
                     /gene="phnI"
                     /locus_tag="RHX79_003448"
     CDS             5684..6748
                     /gene="phnI"
                     /locus_tag="RHX79_003448"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate synthase subunit PhnI"
                     /protein_id="HDV2198580.1"
                     /translation="MYVAVKGGEKAIDAAHALQESRRRGNTDLPELSVAQIEQQLNLA
                     VDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTEMRLE
                     RRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQSPSPHVFSLLA
                     RQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRN
                     HPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLV
                     FGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHY
                     VDFQAELELLKRLQQEKNHG"
     gene            6741..7586
                     /gene="phnJ"
                     /locus_tag="RHX79_003449"
     CDS             6741..7586
                     /gene="phnJ"
                     /locus_tag="RHX79_003449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
                     /protein_id="HDV2198581.1"
                     /translation="MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPM
                     PYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDAT
                     LIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYED
                     IARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPP
                     FTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQS
                     EAKNQ"
     gene            7583..8341
                     /gene="phnK"
                     /locus_tag="RHX79_003450"
     CDS             7583..8341
                     /gene="phnK"
                     /locus_tag="RHX79_003450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnK"
                     /protein_id="HDV2198582.1"
                     /translation="MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGK
                     TTLLKSISARLTPQQGEIHYESRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSA
                     GGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNL
                     VTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLV
                     MKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQN"
     gene            8518..9198
                     /gene="phnL"
                     /locus_tag="RHX79_003451"
     CDS             8518..9198
                     /gene="phnL"
                     /locus_tag="RHX79_003451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnL"
                     /protein_id="HDV2198583.1"
                     /translation="MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSG
                     SGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTIGWVSQFLRVI
                     PRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNI
                     ARGFIVDYPILLLDEPTASLDAKNSAAVVELIHEAKARGAAIVGIFHDEAVRNDVADR
                     LHPMGASS"
     gene            9195..10331
                     /gene="phnM"
                     /locus_tag="RHX79_003452"
     CDS             9195..10331
                     /gene="phnM"
                     /locus_tag="RHX79_003452"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HDV2198584.1"
                     /translation="MIINNVKLVLENEVVHGSLEVQDGEIRAFAESQSRLPEAMDGEG
                     GWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVR
                     DGGDRLENLEKMINTIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLV
                     SLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAAL
                     CHARQIALASHDDATHAHVAESHQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVR
                     GGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDESNRFTLPQAVRLVTKN
                     PAQALNLQDRGVIGEGKRADLVLAHRQGNHIHIDHVWRQGKRVF"
     gene            10331..10888
                     /gene="phnN"
                     /locus_tag="RHX79_003453"
     CDS             10331..10888
                     /gene="phnN"
                     /locus_tag="RHX79_003453"
                     /EC_number="2.7.4.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 1,5-bisphosphokinase"
                     /protein_id="HDV2198585.1"
                     /translation="MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASA
                     GSENHIALSEREFFTRAGQNLLALSWHANGLYYGVGIEIDLWLHAGFDVVVNGSRAHL
                     PQARARYQSALLPVCLQVSPEILRQRLENRGRENASEINARLARAARYTPQDCHTLNN
                     DGSLRQSVDTLLTLIHQKEKHHACL"
     gene            10875..11309
                     /gene="phnO"
                     /locus_tag="RHX79_003454"
     CDS             10875..11309
                     /gene="phnO"
                     /locus_tag="RHX79_003454"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoalkylphosphonate N-acetyltransferase"
                     /protein_id="HDV2198586.1"
                     /translation="MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRA
                     PNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAE
                     EEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHFRFTKAL"
     gene            11311..12069
                     /gene="phnP"
                     /locus_tag="RHX79_003455"
     CDS             11311..12069
                     /gene="phnP"
                     /locus_tag="RHX79_003455"
                     /EC_number="3.1.4.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism protein PhnP"
                     /protein_id="HDV2198587.1"
                     /translation="MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVV
                     KFNDAITLIDAGRHDLTDRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDVIPVYGPP
                     DEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVA
                     WLSDTAGLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQV
                     ILTHISHQFDAWLMENALPSGFEVGFDGMEIGVA"
     gene            complement(12216..12545)
                     /gene="yjdP"
                     /locus_tag="RHX79_003456"
     CDS             complement(12216..12545)
                     /gene="yjdP"
                     /locus_tag="RHX79_003456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YjdP"
                     /protein_id="HDV2198588.1"
                     /translation="MKRFPLFLLFTLLTLSTVPAQADIIDDTIGNIQQAINDAYNPDR
                     GRDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERR
                     MEDEYGR"
     gene            complement(12614..12931)
                     /locus_tag="RHX79_003457"
     CDS             complement(12614..12931)
                     /locus_tag="RHX79_003457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /protein_id="HDV2198589.1"
                     /translation="MQPVFLFKKRTGAMGGHVAGTAGFCVAVPAFYSWSMSEVIDKDT
                     RSSERTDYPHYASEVALAFGSRVVGLELAKMIVDAWLGAQYEGGRHQQRVEAITAIEQ
                     RRN"
BASE COUNT         2826 a         3901 c         3643 g         2584 t
ORIGIN      
        1 attttctttt tgcgtttcct ttcaaatgaa aacgatcgtc gtctaaaatc agcagtaccc
       61 ccgacaaact cagggatttt gtgtataatt gcggcctttt tcggcaatct gccgtttttt
      121 ggcgcttttg ccctgctgac ttttgaggaa atccacatgt cattaccaca ctgcccaaaa
      181 tgcaactccg aatacactta cgaagataac ggcatgtaca tctgcccgga atgtgcctac
      241 gaatggaacg acgcagaacc tgcacaggaa agcgacgagc tgatcgttaa agatgctaac
      301 ggcaatctgc tggctgacgg cgacagcgtt accatcatta aagatctgaa ggtgaaaggt
      361 agctcttcga tgctgaaaat tggcaccaaa gtgaaaaaca tccgcctggt tgaaggcgac
      421 cataacatcg attgcaaaat cgacggtttt ggtccgatga aactgaaatc tgagtttgtg
      481 aaaaagaact gattgtattg tgatcggtaa gccggataag gcgctcgcgc cgcatccggc
      541 aacgatgccg actgcctgat gcgacgctga ccgcgtctta tcaggcttcc ctctcatctg
      601 tataaatttc gaactacact taactggctt ctcttaactg aggtcaccat catgccgtta
      661 agtccctacc tctcttttgc cggtaactgt gccgacgcaa ttgcttatta tcaacgtacg
      721 ttgggcgctg aactgctcta taaaatcagc ttcggcgaaa tgccaaaatc agcgcaggac
      781 agcgccgaga actgcccttc cggaatgcaa tttcccgata ccgccatcgc tcatgccaac
      841 gtgcgcattg ccggaagcga catcatgatg agcgatgcca tgccgtcagg aaaagccagc
      901 tactccggct ttacgctggt gctcgattcg caacaggtcg aagaaggaaa acgctggttt
      961 gacaatcttg ccgctaacgg aaaaatcgaa atggcctggc aggaaacttt ctgggcgcat
     1021 ggctttggca aagtcaccga taaatttggc gtaccgtgga tgattaatgt cgtcaaacaa
     1081 caaccaacgc aataatccgc cgggaggccc gccctcccgc actgtcatcg aattcccgtt
     1141 aactcttcat ctgttagtca cttttaatta accaaatcgt cacaataatc cgccacgatg
     1201 gagccacttt tttagggagg ctgcatcatg caaacgatta tccgtgtcga gaagctcgcc
     1261 aaaaccttca atcagcatca ggcgctgcat gcggttgatc tgaacattca tcacggtgaa
     1321 atggtggctc tgcttgggcc gtcgggttcc ggcaaatcca cccttttacg tcacttaagc
     1381 ggtttgatta ccggcgataa atccgccggc agccatatcg agctgctggg ccgcacagtc
     1441 cagcgcgaag gccgtctggc gcgcgatatc cgcaaaagcc gcgccaacac cggctacatc
     1501 ttccaacaat tcaacctggt gaaccgcctg agcgtactgg agaacgtgct gattggcgcg
     1561 ctcggcagca cgccgttctg gcgcacctgt tttagctggt tcaccggcga gcagaaacag
     1621 cgcgcgttac aggcgctgac ccgcgttggc atggtgcatt ttgcccatca gcgcgtttcc
     1681 accctctccg gcggacagca gcagcgtgtg gcgattgccc gcgcgctgat gcagcaggcg
     1741 aaggtgattc tggccgatga acccatcgcc tcgctggacc cggaatccgc ccgcatcgtg
     1801 atggacaccc tgcgcgacat caatcagaac gacggcatca ccgtggtcgt cacgctgcat
     1861 caggtggatt acgccctgcg ctactgcgaa cgcatcgtcg ccctgcgcca ggggcacgtt
     1921 ttctacgacg gcagcagcca acagtttgat aacgaacgtt ttgaccatct ctaccgcagc
     1981 attaatcgca tcgaagagaa cgcgaaagct gcctgacatc cccatcattg aggaaaacga
     2041 atgaacgcta agataattgc ctcgctggcc ttcaccagca tgttcagcct cagcaccctg
     2101 ttaagcccgg cacacgccga agagcaggaa aaggcgctga atttcggcat tatttcaacg
     2161 gaatcacagc aaaaccttaa accgcaatgg acgccattct tacaggatat ggagaagaag
     2221 ctgggcgtga aggtgaacgc cttctttgcc ccagactacg caggcattat ccagggaatg
     2281 cgcttcaata aagtggatat cgcctggtac ggcaacctgt cggcaatgga agcggtggat
     2341 cgcgccaacg gccaggtctt cgcccagacg gtcgcggcgg atggatcgcc aggttactgg
     2401 agcgtgttga tcgtcaacaa agatagtccg atcaacaacc tgaacgatct gctggcgaag
     2461 cggaaagatc tcaccttcgg caatggcgat cctaactcca cctctggctt cctcgtcccc
     2521 ggttactacg tctttgccaa aaacaatatc tccgccagcg actttaagcg caccgtcaac
     2581 gctgggcatg aaaccaacgc gctggccgtc gccaacaagc aggtggatgt tgccaccaac
     2641 aacaccgaaa acctcgacaa gctgaaaacc tccgcgccag agaagctgaa agaactgaag
     2701 gtgatctgga agtcgccgct gatcccaggc gatccgatcg tctggcgcaa gaatctctcc
     2761 gaaaccacca aagacaagat ctacgacttc tttatgaact acggaaaaac gccggaagag
     2821 aaagcggtgc tggaacgcct gggctgggcc ccgttccgcg cctccagcga cctgcaactg
     2881 gtgccgattc gccagctcgc actgtttaaa gagatgcagg gcgtaaaaag caataaagga
     2941 ctgaatgagc aggacaagct ggcgaaaacc accgagattc aggcgcagct ggatgacctg
     3001 gaccgcctga acaacgcgtt aagcgcgatg agttcggtga gtaaagcggt gcagtaatgt
     3061 gctcgatcgg tcccctctcc cttgagggag agggttaggg agaaaacatt aaacggagcc
     3121 aaacatgcaa accatcacca tcgccccatc caagcgtagc tggttctcgc ttctgagctg
     3181 ggccgttgtt ctcgccgtgc tggtcgtctc gtggcagggc gcggaaatgg ccccgcttac
     3241 gctgattaaa gacggcggca acatggcaac cttcgctgcc gacttcttcc cgcccgattt
     3301 cagccagtgg caggattacc tcaccgaaat ggccgtcacg ctgcaaatcg ccgtctgggg
     3361 caccgcgctg gcagtggttc tctccatccc cttcggtctg atgagcgccg aaaacctggt
     3421 gccgtggtgg gtttaccagc ccgttcgccg cctgatggat gcctgccgcg ccattaacga
     3481 aatggtcttc gccatgctgt tcgtggtcgc cgtcggtctc ggcccgttcg ctggcgtgct
     3541 ggcgctattt attcacacca ccggcgtgct ctcgaaactg ctttccgaag cggtggaagc
     3601 gattgaaccc ggcccggtgg aaggcattcg cgccaccggc gccaacaagc tggaagagat
     3661 cctttacggc gtgctgccac aggtaatgcc gctgctgatc tcctactccc tctatcgctt
     3721 cgaatccaac gtccgctcgg cgaccgtcgt cggcatggtc ggtgcaggcg ggatcggcgt
     3781 caccctgtgg gaagcgattc gcggtttcca gttccagcaa acctgcgccc tgatggtgct
     3841 tatcatcgtc acggtcagcc tgctggattt cctctctcaa cggttgcgta agcactttat
     3901 ctgataagcg aggcattgat atctatgcac ttgtctacac atccgaccag ctacccaaca
     3961 cgctatcagg agatagccgc aaaacttgag caggagcttc gtcaacacta ccgctgcggc
     4021 gactatcttc ccgccgagca gcaactggcg gcgcgctttg aggtgaaccg ccacaccctg
     4081 cgccgcgcca tcgaccaact ggtggaaaaa ggctgggtac agcgccgtca gggcgtcggc
     4141 gtgctggtgc tgatgcgccc gttcgattac ccgctcaacg cccaggcgcg ttttagccag
     4201 aacctgctgg accagggtag ccatcccacc agcgaaaaac tgctgtcggt attgcgcccc
     4261 gcgtccggtc acgtcgctga cgcgctgggg attaccgagg gcgagaacgt tatccatttg
     4321 cgcaccctgc gtcgcgtcaa cggcgtcgcg ctctgtttaa tcgaccacta ctttgcggac
     4381 ctcacccttt ggccgacgct gcaacgcttc gacagcggtt cgctgcacga ttttctgcgc
     4441 gagcaaaccg gaattgcgct gcgccgcagc cagacgcgga tcagcgcccg tcgcgcccag
     4501 gccaaagagt gccagcgtct tgaaattccg aatatgtcgc cgctgctgtg cgtgcgcacc
     4561 cttaaccacc gtgacggtga aagcagcccg gcggagtact ccgtcagcct gacgcgcgcc
     4621 gacatgattg aattcactat ggagcactga atgcacgcag ataccgcgac ccgccagcac
     4681 tggatgtccg tactggcgca cagccaaccg gctgaactgg cagcccgcct gaacgcgctg
     4741 aacatcaccg ccgactatga agtgatccgc actgccgaaa ctggcctggt gcagattcag
     4801 gcgcgaatgg gcggtaccgg cgaacgcttt tttgccggcg acgccacgct gacccgcgcc
     4861 gccgtacgcc tgactgacgg caccctcggc tacagctggg tgctggggcg tgataaacag
     4921 cacgccgaac gctgcgcgct gattgatgcg ctgatgcagc aatctcgcca ttttcaaaac
     4981 ttatcagaaa cccttattgc cccgctggac gctgaccgta tggcacgcat tgccgcacgc
     5041 caggccgaag tgaacgccag ccgggtcgac ttctttacga tggttcgcgg agacaacgca
     5101 tgaccctgga aaccgctttt atgcttcctg tgcaggatgc ccagcacagt tttcgtcgcc
     5161 tgttaaaggc catgagcgag ccgggcgtga ttgtcgccct gcatcagctc aaacgcggct
     5221 ggcagccgct gaatatcgcc accaccagcg tgctgctgac gctggctgat aacgacacgc
     5281 cggtgtggct ttccgcgcca ttaagtaacg atatcgtcag ccagagcctg cgttttcata
     5341 ccaacgcgcc gctggtcaat cagccggaac tggcgacctt cgcggtaacg gatgaagcga
     5401 tttccagcga acagctcaac gctctttcca gcggcaccgc tgttgcgccg gaagcgggcg
     5461 cgacgctgat tttacaggtc gtcagcctga gcggcgggcg catgctgcgc cttactggcg
     5521 cgggtattgc cgaagaacga atgatcgctc cgcagctgcc ggagtgcatt ctgcacgaac
     5581 tcaccgagcg cccgcacccg ttcccgctcg gcatcgacct gatcctgacc tgcggcgagc
     5641 ggctgctggc tatcccgcga accactcatg tggaggtgtg ctgatgtacg ttgccgtgaa
     5701 agggggcgag aaggcgatcg acgccgccca cgccctgcaa gagagccgac gccggggcaa
     5761 taccgatttg cctgaactga gcgtcgccca gattgaacag cagcttaatc ttgcagtaga
     5821 tcgcgtgatg accgaaggcg gcattgccga ccgcgaactg gcggcgctgg cgctgaaaca
     5881 ggccagcggc gataacgtcg aagcgatttt cctgctacgc gcctaccgca ccacgctggc
     5941 gaagctggcg gtaagcgagc cgctcgacac cacggagatg cgtctcgaac ggcgtatttc
     6001 agcggtttat aaagatattc ccggcggtca gttgcttggc ccaacctacg actacaccca
     6061 tcgcctgctc gatttcaccc tgctggcaaa cggcgaagcg ccgacgctga ccaccgcaga
     6121 cagcgaacaa tccccgtcgc cgcacgtttt cagcctgctg gcgcgtcagg ggctggcgaa
     6181 gtttgaagag gatagcggcg cacagccgga tgacatcacc cgcacgccgc cggtttaccc
     6241 ctgttcacgt tcttcccgtt tgcagcagtt gatgcgcggc gacgaaggct atttgctggc
     6301 gctggcctac tctacccagc gcggttacgg acgcaatcac ccgttcgcgg gcgaaatccg
     6361 cagtggttac atcgacgtgt cgattgtgcc ggaagagctg ggatttgcgg tgaacgtcgg
     6421 cgaactgctg atgaccgagt gtgaaatggt caacggtttt attgacccgc cggatgagcc
     6481 gccgcacttc acgcgcggct acgggctggt gttcggcatg agcgagcgca aagcgatggc
     6541 gatggcgctg gttgaccgtg cgttgcaggc tccggagtac ggcgagcacg cgacaggccc
     6601 ggcgcaggat gaagagttcg tgctggcgca tgccgacaac gtcgaagccg caggctttgt
     6661 ctcgcacctc aaactccccc actacgtcga tttccaggcc gaactggagc tactcaaacg
     6721 tctgcaacag gagaagaacc atggctaatc tgagcggcta caactttgcc tacctcgacg
     6781 agcagaccaa acgcatgatc cgccgcgcta tcttaaaagc ggtggcgatc cccggttatc
     6841 aggtgccgtt tggcgggcgc gagatgccga tgccatacgg ctggggaacc ggcggcatac
     6901 agctcaccgc cagcgtgatt ggcgaaagcg acgtgctgaa ggtgattgac cagggtgcgg
     6961 atgacaccac caacgccgtg tcgattcgca acttctttaa gcgcgtgacc ggggtaaaca
     7021 ccactgaacg tacggacgat gcgacgctta tccagacgcg tcaccgcatc cccgaaacgc
     7081 cgctgaccga agatcagatc attatcttcc aggtgccaat cccggaaccg ctgcgcttta
     7141 tcgagccgcg cgaaacggaa acccgcacca tgcacgcgct ggaagagtac ggcgtgatgc
     7201 aggtgaaact gtatgaagat atcgcccgct tcggtcatat cgccactacc tacgcctatc
     7261 cggtgaaggt gaacgggcgc tacgtaatgg acccgtcgcc gatcccgaaa ttcgataacc
     7321 ccaaaatgga catgatgccc gccctgcaac tgttcggcgc ggggcgcgag aagcgcatct
     7381 atgcggtgcc gccgtttacc cgcgtggaaa gtctcgattt cgacgatcac ccgttcaccg
     7441 ttcagcagtg ggatgagcca tgcgccatct gcggatcgac ccacagctat cttgatgaag
     7501 tggtgctgga tgacgccgga aaccgcatgt ttgtctgctc cgataccgat tattgccgcc
     7561 aacagagcga ggcaaaaaac caatgaatca accgttactt tcggtcaata acctgaccca
     7621 cctttacgcg ccgggcaaag gctttagcga tgtctctttt gatttatggc cgggggaagt
     7681 gctgggcatt gtcggggagt ccggctccgg gaagaccacg ctgctgaaat caatctccgc
     7741 gcgcctgacg ccgcagcagg gggagattca ctatgagagc cgttcgctgt acgcaatgag
     7801 cgaggccgac cgccgtcgcc tgctgcgcac cgaatggggc gtagtgcatc agcatccgct
     7861 cgacggcctg cgccgccagg tgtcggcagg cggcaatatc ggcgagcggc tgatggcgac
     7921 cggggcacgt cattacggcg atattcgtgc caccgcgcag aagtggctgg aagaggtgga
     7981 aattcccgcc aaccggatcg acgacctgcc gaccaccttt tccggcggca tgcagcaacg
     8041 tttgcagatc gcccgcaacc tggtgacgca tccgaagctg gtgtttatgg acgagccgac
     8101 cggcggactg gatgtgtcgg tacaggcacg cctgctcgac ctgctgcgcg gcctggtggt
     8161 ggagctgaac ctcgcggtag tgattgtcac ccacgattta ggcgtcgccc gcctgctggc
     8221 ggaccgtttg ctggtgatga agcaggggca agtggtggag agtgggttaa ccgaccgcgt
     8281 gctcgacgac ccgcaccatc cgtatacaca actgctggtg tcatcggttt tgcagaattg
     8341 aatgcaacac cgtgcgcgct gatcccctca ccccggccct ctcccggagg gagagggaga
     8401 aaaccggcgc aatattcaac accgcgcaca atcggtcccc tcgccccttc ggggagaggg
     8461 ttagggtgag gggcaatgcg cgcaccgctc cccaatatgc gaaccacgag gcgaaaaatg
     8521 attaacgtac aaaacgtcag taaaaccttc atcctgcacc agcaaaacgg cgtgcgcctg
     8581 cccgtcttac aacgcgcctc gctcaccgtc aacgcaggtg aatgcgtggt gctccacggc
     8641 cattccggca gcggcaaatc aactctgcta cgctcgctgt acgccaacta tctgcccgac
     8701 gaagggcaaa tccagatcaa acacggtgac gaatgggtag acctggtcac cgcgccagcg
     8761 cgcaaagtgg tggagatccg caaaactacc atcggctggg tgagccagtt tctgcgcgtc
     8821 atcccgcgta tctcagcact ggaagtggtg atgcagccgc tgctcgatac aggcgttccg
     8881 cgtgaagcct gcgccgctaa agccgcgcgt cttctcaccc gcctgaacgt gccggaacgc
     8941 ctgtggcacc tggcaccatc gaccttctcc ggcggcgaac agcagcgcgt caacatcgcc
     9001 cgcggcttta tcgtcgacta ccccattctg ctgctcgacg aacctaccgc ctcgctggac
     9061 gccaaaaaca gcgccgcggt ggtggaactg attcacgaag ccaaagcccg tggcgcagcc
     9121 atcgtcggca tcttccatga cgaagctgta cgtaatgacg tcgccgaccg cctgcaccca
     9181 atgggagcct cttcatgatt atcaataacg ttaagctggt gctggaaaac gaggtggtgc
     9241 acggttcgct ggaggtgcag gatggcgaaa tccgcgcctt tgccgaaagc cagagccgcc
     9301 tgccagaagc gatggacggc gaaggtggct ggctactacc cggcctgatt gagctgcata
     9361 ccgacaacct cgataaattc ttcaccccgc gcccgaaagt cgactggccc gcccattcgg
     9421 cgatgagcag ccacgacgcg ctgatggtgg caagcggcat caccaccgtg ctggacgcgg
     9481 tggcgattgg cgacgtgcgc gacggcggcg atcggctgga gaatctggag aagatgatca
     9541 acaccatcga agagacgcag aaacgcggcg tcaaccgcgc cgagcaccgc ctgcacctgc
     9601 gctgcgaact gccgcatcac accacactgc cgctgtttga aaaactggtt cagcgcgaac
     9661 cggtgacgct ggtgtcgctg atggaccact caccgggcca gcgccagttc gctaaccgcg
     9721 agaagtatcg cgaatattat cagggcaaat actccctcac cgatgcgcag atgcagcagt
     9781 acgaagaaga gcaattggcg ctcgccgcac gctggtcgca gccgaatcgc gaatccatcg
     9841 ccgccctgtg ccacgcgcga caaattgcgc tcgccagcca cgatgacgcc acgcacgccc
     9901 acgttgccga atcccaccaa cttggcagcg tgatcgccga atttcccacc acgttcgaag
     9961 cggcggaagc ctcgcgtaag catggcatga acgtgctgat gggtgcgcca aatatcgtgc
    10021 gtggcggctc gcactccggc aatgtggcgg ccagtgaact ggcgcagctt ggtctgctgg
    10081 atatcctctc ttccgactac taccccgcca gcctgctgga tgcggcgttc cgcgtcgccg
    10141 atgacgagag caaccgcttt acgctaccgc aggcggtgag gctggtgacc aaaaatccgg
    10201 cgcaggcgct gaatcttcag gatcgcgggg tgattggcga gggtaaacgc gctgacctgg
    10261 tgctggcgca tcgccagggc aatcacattc atatcgacca cgtctggcgt cagggtaaaa
    10321 gggtgttctg atgatgggaa aactgatttg gttaatgggg ccgtccggct ccgggaaaga
    10381 cagcctgctg gcggaactcc gcctgcggga acaaacgcag ttactggtgg cgcatcgcta
    10441 catcacgcgc gacgccagcg ccggaagtga aaaccatatc gccctgagtg agcgggagtt
    10501 ttttacccgc gcggggcaaa acctgctggc cttaagctgg cacgctaacg gtctgtatta
    10561 tggcgtcggc atcgagattg acctctggct gcacgctgga ttcgacgtag tcgtcaacgg
    10621 ttcacgcgcg catttgccgc aggcacgggc gcgctatcaa tcggcgctgc tgcccgtctg
    10681 tttacaggtt tcgccggaga tcctgcgcca gcgcctggaa aaccgtggcc gtgaaaacgc
    10741 cagtgaaatt aacgcccgcc tggcgcgcgc cgcccgctat actccacagg attgccatac
    10801 gctcaacaat gacggcagcc tgcgccagtc ggtcgacacg ctgctgacgc tgatccatca
    10861 gaaggagaaa caccatgcct gcttgtgagc ttcgcccggc cacgcagtac gataccgacg
    10921 cggtttacgc gctgatttgt gagctaaaac aggcggagtt tgaccaccat gcgtttcgcg
    10981 tgggctttaa cgccaacctg cgcgccccaa acatgcgcta ccatctggcg ctgctggatg
    11041 gcgaagttgt cggcatgatc ggcctgcatt tgcagtttca tctgcatcat gtcaactgga
    11101 tcggcgaaat tcaggaactg gtggtgatgc cgcaggcgcg cggtctgaac gtcggcagta
    11161 aattactggc atgggcagaa gaagaagccc gccaggccgg ggccgaaatg accgagcttt
    11221 ccaccaacgt gaagcgccac gacgcacacc gtttttacct gcgtgaaggc tacgagcaga
    11281 gccacttccg cttcaccaag gcgctgtaac atgagcctga ccctcacgct caccggcact
    11341 ggcggcgcac agggcgttcc ggcatggggc tgcgagtgcg cggcctgcgc cagagcgcgg
    11401 cgctcgccgc agtatcgccg ccagccatgc agcggcgtag tgaagtttaa cgacgcgatc
    11461 accctgatcg acgccgggcg gcacgatctc accgatcgct ggtcgcctgg atcgttccag
    11521 cagtttttgc tgacgcacta ccatatggat cacgtccaag ggctatttcc gctacgctgg
    11581 ggcgtgggcg atgtgatccc ggtctacggc ccgccggatg aacagggctg cgacgatctg
    11641 tttaaacatc cgggcctgct tgatttcagc cacacagtgg aaccgtttgt ggtgtttgat
    11701 ttgcaggggt tgcaggtcac gccgctgccg cttaaccact caaaactgac cttcggttat
    11761 ctgctggaaa cggcacatag ccgggtggcg tggctgtctg acaccgctgg cctgccggaa
    11821 aaaacgctga aatttttact caataatcat ccgcaggtga tggtgattga ttgcagtcac
    11881 ccgccgcgcg cggatgcacc gcgtaatcac tgtgatttaa ataccgtgct tgcgctgaat
    11941 caggttatcc gctcgccaca ggtgattctg acccatatca gccaccagtt tgatgcgtgg
    12001 ctgatggaaa acgcactacc gtcagggttt gaggtggggt ttgatgggat ggagattggg
    12061 gtggcgtgat gagagggaat gtgcgcgctg gccccctcac cctaaccctc tccccagagg
    12121 ggcgagggga ccgattgtgc tcaatattga atattgcgct cgttttctcc ctctccccat
    12181 tggggtgagg ggcgatgcct gctccatacc caacctcatc gcccatactc atcttccatt
    12241 ctccgctctt catcctccag ttgccgacgc tcctgatcaa gctggcgctg gcgatcgtcc
    12301 agctgcctgc ggcgatcttc aaactggcgg cggcggtcat catattgtct gcgccgatcg
    12361 tcgctcactt cacgctgcca gccgtcgtcg cgcgaatctt catagtctcg cccacggtca
    12421 gggttataag cgtcattaat cgcctgctga atattaccaa tagtatcgtc gataatatca
    12481 gcctgggccg gaacggtgga cagcgtgagc agggtgaata aaagaaatag cggaaagcgt
    12541 ttcattagcc aacctcaaaa agaaactcta tccacattag tcattactca tccatgcaag
    12601 tagtggatga atctcaattt ctccgctgct ctattgccgt aatcgcctcc acgcgttgtt
    12661 gatgacgacc gccttcgtac tgtgcgccca gccacgcatc cacaatcatt tttgccagtt
    12721 cgaggccaac cactcgtgaa ccaaaagcca gtgcaacttc actggcataa tgcggataat
    12781 cagtgcgctc tgacgacctg gtgtctttat caatcacctc actcattgac catgaataaa
    12841 aggctggcac agcaacacag aatcctgcgg tgccagcgac atgaccgccc attgctccgg
    12901 tacgtttttt aaaaagaaac accggttgca ttgataaatt gtgctcagta tttg
//
LOCUS       DAPGWB010000125        12940 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.126, whole genome shotgun sequence.
ACCESSION   DAPGWB010000125 DAPGWB010000000
VERSION     DAPGWB010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12940
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.126"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            179..1288
                     /gene="livK"
                     /locus_tag="RHX79_003458"
     CDS             179..1288
                     /gene="livK"
                     /locus_tag="RHX79_003458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter substrate-binding protein LivK"
                     /protein_id="HDV2198590.1"
                     /translation="MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDM
                     EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK
                     PQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENID
                     FVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD
                     QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGA
                     NTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK"
     gene            1336..2262
                     /gene="livH"
                     /locus_tag="RHX79_003459"
     CDS             1336..2262
                     /gene="livH"
                     /locus_tag="RHX79_003459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010436488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivH"
                     /protein_id="HDV2198591.1"
                     /translation="MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHG
                     EVYMIGSYVSFMIIAALMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNS
                     KRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVI
                     WIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAV
                     AGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLS
                     TEYKDVVSFALLILVLLVMPTGILGRPEVEKV"
     gene            2259..3536
                     /gene="livM"
                     /locus_tag="RHX79_003460"
     CDS             2259..3536
                     /gene="livM"
                     /locus_tag="RHX79_003460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched chain amino acid ABC transporter
                     permease LivM"
                     /protein_id="HDV2198592.1"
                     /translation="MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDSASDVR
                     WQWVFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVA
                     WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
                     GLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGG
                     PNGISQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSL
                     FVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQ
                     GFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGG
                     LMVLMMIWRPQGLLPMTRPQLKLKNGAAKGEQA"
     gene            3533..4300
                     /gene="livG"
                     /locus_tag="RHX79_003461"
     CDS             3533..4300
                     /gene="livG"
                     /locus_tag="RHX79_003461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000084170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivG"
                     /protein_id="HDV2198593.1"
                     /translation="MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGK
                     TTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLL
                     VAQHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQR
                     RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVM
                     GISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYLGEA"
     gene            4302..5015
                     /gene="livF"
                     /locus_tag="RHX79_003462"
     CDS             4302..5015
                     /gene="livF"
                     /locus_tag="RHX79_003462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivF"
                     /protein_id="HDV2198594.1"
                     /translation="MEKVMLSFDKISAHYGKIQALHEVSLHINQGEIVTLIGANGAGK
                     TTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLA
                     MGGFFAERDQFQERIKWVYELFPRLHERRVQRAGTMSGGEQQMLAIGRALMSNPRLLL
                     LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLS
                     DTGDALLANEAVRSAYLGG"
     gene            5411..6727
                     /gene="ugpB"
                     /locus_tag="RHX79_003463"
     CDS             5411..6727
                     /gene="ugpB"
                     /locus_tag="RHX79_003463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     substrate-binding protein UgpB"
                     /protein_id="HDV2198595.1"
                     /translation="MKPLHYTASALALGLALMGNAQAVTTIPFWHSMEGELGKEVDSL
                     AQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIK
                     PVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGL
                     DPEQPPKTWQDLADYAAKLKASGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDG
                     TDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLAN
                     IREYAKFNYGVGMMPYDADAKDAPQNAIIGGASLWVMQGKNKETYTGVAKFLDFLAKP
                     ENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADTATRQMLNKPPLPFTKGLRLGN
                     MPQIRVIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKSTKS"
     gene            6825..7712
                     /gene="ugpA"
                     /locus_tag="RHX79_003464"
     CDS             6825..7712
                     /gene="ugpA"
                     /locus_tag="RHX79_003464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000099274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpA"
                     /protein_id="HDV2198596.1"
                     /translation="MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSV
                     DPFGFSSQFVGLDNFVTLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVR
                     GSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFL
                     VVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFL
                     LVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFL
                     VIVLTVVQFRYVESKVRYQ"
     gene            7709..8554
                     /gene="ugpE"
                     /locus_tag="RHX79_003465"
     CDS             7709..8554
                     /gene="ugpE"
                     /locus_tag="RHX79_003465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000572177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpE"
                     /protein_id="HDV2198597.1"
                     /translation="MIENRPWLTIFSHTMLILGIAVILFPLYVAFVAATLDKQAVYAA
                     PMTLIPGTHLLENIHNIWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAI
                     VWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLQMLDSYAGLTLPLMASATATF
                     LFRQFFMTLPDELVEAARIDGASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWP
                     LLIITDVDLGTTVAGIKGMIATGEGTTEWNSVMAAMLLTLIPPVVIVLVMQRAFVRGL
                     VDSEK"
     gene            8556..9626
                     /gene="ugpC"
                     /locus_tag="RHX79_003466"
     CDS             8556..9626
                     /gene="ugpC"
                     /locus_tag="RHX79_003466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol 3-phosphate ABC transporter ATP
                     binding protein UgpC"
                     /protein_id="HDV2198598.1"
                     /translation="MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKS
                     TLLRMVAGLERVTEGDIWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLK
                     IRGMGKQQIAERVKEAARILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDE
                     PLSNLDAKLRVQMRLELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGT
                     PVEVYEKPASLFVASFIGSPAMNLLTGRVNTEGTHFELDGGIVLPLNGGYRQYAGRKM
                     TLGIRPEHIALSSQAEGGVPLVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGS
                     TLWLHLAENQLHLFDGETGQRV"
     gene            9623..10361
                     /gene="ugpQ"
                     /locus_tag="RHX79_003467"
                     /pseudo
     CDS             9623..10361
                     /gene="ugpQ"
                     /locus_tag="RHX79_003467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709219.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
     gene            complement(10348..10788)
                     /locus_tag="RHX79_003468"
     CDS             complement(10348..10788)
                     /locus_tag="RHX79_003468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2756 family protein"
                     /protein_id="HDV2198599.1"
                     /translation="MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQ
                     TQQIQQKGMLNQQLKTQTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGG
                     MLNSNRNPDSSLNQQHMLPERRNGDMLNQPSTPQPDIPLKTIGP"
     gene            10908..12650
                     /gene="ggt"
                     /locus_tag="RHX79_003469"
     CDS             10908..12650
                     /gene="ggt"
                     /locus_tag="RHX79_003469"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HDV2198600.1"
                     /translation="MIKPTFLRRVAIAALLSGSCFSAAAAPPAPPVSYGVEEDVFHPV
                     RAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIR
                     SKNGNTTAIDFREMAPAKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDK
                     YGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVLPNHENSKAIFWKEGEPLKK
                     GDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERT
                     PISGDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAY
                     ADRSEYLGDPDFVKVPWQALTNKAYAKSIADQIDINKAKPSSEIRPGKLAPYESNQTT
                     HYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGD
                     ANAVGPNKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGMNVAEA
                     TNAPRFHHQWLPDELRVEKGFSPDTLKLLEAKGQKVALKEAMGSTQSIMVGPDGELYG
                     ASDPRSVDDLTAGY"
     gene            complement(12688..>12940)
                     /locus_tag="RHX79_003470"
     CDS             complement(12688..>12940)
                     /locus_tag="RHX79_003470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YrhB family protein"
                     /protein_id="HDV2198601.1"
                     /translation="NHYLDDADLPVVITLHGRFSQGWYFCFEAREFLETGDEAARLAG
                     NAPFIIDKDSGEIHSLGTAKPLEEYLQDYEIKKATFGLP"
BASE COUNT         2861 a         3321 c         3719 g         3039 t
ORIGIN      
        1 gaatattatc tgttcttaat cgactgaaaa atagggattt taatcactat tatcacaaaa
       61 tactgcgcta aacccttaat cagacaggca aaaacagtgc agtataaaaa aagaacagtc
      121 tgatttgtta acacataaaa acaaagcaac acaacatcac gaatggggat ttttgactat
      181 gaaacggaat gcgaaaacta tcatcgcagg gatgattgca ctggcaattt cacacaccgc
      241 tatggctgac gatattaaag tcgccgttgt cggcgcgatg tccggcccga ttgcccagtg
      301 gggcgatatg gaatttaacg gcgcgcgtca ggcgattaaa gacattaatg ccaaaggggg
      361 aattaaaggc gataagctgg tgggcgtgga atatgacgac gcctgcgacc cgaaacaagc
      421 cgttgcggtc gccaacaaaa tcgttaacga cggcattaaa tacgttattg gtcatctgtg
      481 ttcttcttct acccaacctg catcagatat ctacgaagac gaaggtattc tgatgatctc
      541 gccgggagcg accaacccgg agctgaccca acgcggttat caacacatta tgcgtactgc
      601 cgggctggac tcttcccagg ggccaacggc ggcaaaatac attcttgaga cggtgaagcc
      661 ccagcgcatc gccatcattc acgacaaaca acagtatggc gaagggctgg cgcgttcggt
      721 gcaggacggg ctgaaagcgg ctaacgccaa cgtcgtcttc ttcgacggta ttaccgccgg
      781 ggagaaagat ttctccgcgc tgatcgcccg cctgaaaaaa gaaaacatcg acttcgttta
      841 ctacggcggt tactacccgg aaatggggca gatgctgcgc caggcccgtt ccgttggcct
      901 gaaaactcag tttatggggc cggaaggtgt gggtaacgca tcattgtcga atattgccgg
      961 tgatgctgcc gaaggcatgt tggtcactat gccaaaacgc tatgaccagg atccggcaaa
     1021 ccagggcatc gttgatgcgc tgaaagcaga caagaaagat ccgtccgggc cttatgtctg
     1081 gatcacctac gcggcggtgc aatctctggc gactgccctt gagcgtactg gcagcgatga
     1141 gccgctggcg ctggtgaaag atttaaaagc taacggtgca aacaccgtga ttgggccgct
     1201 gaactgggat gaaaaaggcg atcttaaggg atttgatttt ggtgtcttcc agtggcacgc
     1261 cgacggttca tccacggcag ccaagtgatc atcccaccgc ccgtaaaatg cgggcgggtt
     1321 tagaaaggtt accttatgtc tgagcagttt ttgtatttct tgcagcagat gtttaacggc
     1381 gtcacgctgg gcagtaccta cgcgctgata gccatcggct acaccatggt ttacggcatt
     1441 atcggcatga tcaacttcgc ccacggcgag gtttatatga ttggcagcta cgtctcattt
     1501 atgatcatcg ccgcgctgat gatgatgggc attgataccg gctggctgct ggtggcggcg
     1561 ggattcgtcg gcgcaatcgt cattgccagc gcctacggct ggagtatcga acgggtggct
     1621 taccgcccgg tgcgtaattc taagcgcctg attgcgctta tttccgcaat cggtatgtcc
     1681 atcttcctgc aaaactacgt cagcctgacc gaaggttcgc gcgatgtggc gctgcccagc
     1741 ctgtttaacg gtcagtgggt ggtgggccat agcgaaaact tctctgcctc tattaccacc
     1801 atgcaggcgg tgatctggat tgtcaccttc ctcgccatgc tggcgctgac gattttcatt
     1861 cgctattccc gtatggggcg cgcctgtcgt gcctgcgcgg aagatctgaa aatggcgagt
     1921 ctgcttggca ttaacaccga ccgggtgatt gcgctgacct ttgtgattgg cgcggcgatg
     1981 gcggcggtgg cgggtgtgct gctcggtcag ttctacggcg taattaaccc ctacatcggc
     2041 tttatggccg ggatgaaagc ctttaccgct gcggtgctcg gtgggattgg cagcattcca
     2101 ggggcgatga ttggtgggct gatcctgggg attgcggagg cgctctcttc tgcctatctg
     2161 agtacggaat ataaggatgt ggtttcattt gccctgctga ttctggtgct gctggtgatg
     2221 ccgaccggta ttctgggtcg cccggaggta gagaaagtat gaaaccgatg catattgcaa
     2281 tggcgctgct ctctgccgcg atgttttttg tcctggcggg cgtctttatg ggcgtgcaac
     2341 tggagctgga tggcaccaaa ctggtggtcg acagcgcttc ggatgtccgt tggcagtggg
     2401 tgtttatcgg cacggcggtg gtctttttct tccagctttt gcgaccggct ttccagaaag
     2461 ggctaaaaag cgtttccgga ccgaagttta ttctgcccgc gattgatggc tccacggtga
     2521 agcagaaact attcctcgtg gcgctgctgg tgcttgcggt ggcgtggccg tttatggtgt
     2581 cgcgtgggac ggtggatatc gccaccctga ccatgatcta cattatcctc ggcctcgggc
     2641 tgaacgtggt tgttggtctt tctggtctgc tggtgctggg gtacggcggc ttttacgcca
     2701 tcggcgctta cacttttgcg ctgctcaatc actattacgg cctgggcttc tggacctgtc
     2761 tgccgattgc cgggttaatg gcagcggcgg ccggcttcct gctcggcttc ccggtgcttc
     2821 gcttgcgcgg cgactatctg gcgatcgtta ccctcggttt cggcgaaatt gtgcgcatat
     2881 tgctgctcaa taacaccgaa attaccggcg gcccgaacgg aatcagtcag atcccgaaac
     2941 cgacactctt cggactcgag ttcagccgta ccgctcgtga aggcggctgg gacacgttca
     3001 gtaatttctt tggcctgaaa tacgatccct ccgatcgtgt catcttcctc tacctggtgg
     3061 cgttgctgct ggtggtgcta agcctgtttg tcattaaccg cctgctgcgg atgccgctgg
     3121 ggcgtgcgtg ggaagcgttg cgtgaagacg agatcgcctg ccgttcgctg ggcttaagcc
     3181 cgcgtcgtat caagctgact gcctttacca taagtgccgc gtttgccggt tttgccggaa
     3241 cgctgtttgc tgcgcgccag ggctttgtca gcccggaatc cttcaccttt gctgaatcgg
     3301 cgtttgtact ggcgatagtg gtgctcggcg gtatgggatc gcagtttgcg gtgattctgg
     3361 cggcaatttt gctggtggta tcgcgcgaat tgatgcgtga tttcaacgaa tacagcatgt
     3421 taatgctcgg tggtttgatg gtgctgatga tgatctggcg tccgcagggc ttgctgccca
     3481 tgacgcgccc gcaactgaag ctgaaaaacg gcgcagcgaa aggagagcag gcatgagtca
     3541 gccattatta tctgttaacg gtctgatgat gcgcttcggc ggcttgctgg cggtgaacaa
     3601 cgtcaatctt gaactgtacc cgcaggagat cgtctcgtta atcggcccta acggtgccgg
     3661 aaaaaccacg gtttttaact gcctgaccgg attctacaaa cccaccggcg gcactatttt
     3721 actgcgtgat cagcatctgg aaggtttacc ggggcagcaa attgcccgca tgggcgtggt
     3781 gcgtaccttc cagcatgtgc gtctgttccg tgaaatgacg gtgattgaaa acctgctggt
     3841 ggcgcagcat caacaactga aaaccgggct gttctctggc ctgttgaaaa cgccttcttt
     3901 ccgtcgcgcc cagagcgaag cgctcgaccg cgccgccacc tggcttgagc gcattggttt
     3961 gctggaacac gccaaccgtc aggcgagtaa cctggcctat ggtgaccaac gccgtctgga
     4021 gattgcccgc tgcatggtga cgcagccgga gattttaatg ctcgacgaac cggcggcagg
     4081 tcttaaccca aaagaaacca aagagctgga tgagctgatt gccgaactgc gcaatcatca
     4141 caacaccact atcttgttga ttgaacacga tatgaagctg gtgatgggga tttcagaccg
     4201 aatttatgtg gtcaatcagg ggacgccact ggcaaacggt acgccggagc agatccgtaa
     4261 taacccggac gtgatccgtg cctatttagg tgaggcataa gatggaaaaa gtcatgttgt
     4321 cctttgacaa aatcagcgcc cactacggca aaatccaggc gctgcatgag gtgagcctgc
     4381 atatcaatca gggcgaaatt gtcaccctta ttggcgcgaa tggcgcgggg aaaaccacct
     4441 tgctcggcac attatgcggc gacccgcgcg ccaccagcgg gcgaattgtg tttgatgata
     4501 aagacattac cgactggcag acggcgaaaa tcatgcgcga agcggtagcg attgtcccgg
     4561 aagggcgtcg cgtcttctcg cggatgacgg tggaagagaa cctggcgatg ggcggcttct
     4621 ttgccgaacg tgaccagttt caggagcgca taaagtgggt gtatgagctg tttccacgtc
     4681 ttcatgagcg tcgtgttcag cgggcgggca ccatgtccgg cggtgaacag cagatgctgg
     4741 cgattggtcg cgcgctgatg agcaacccgc gtttgttgtt gcttgatgag ccatcgctcg
     4801 gtcttgcgcc gattatcatc cagcaaattt tcgacaccat cgagcagctg cgcgagcagg
     4861 ggatgactat cttcctcgtc gagcagaacg ccaaccaggc gctaaagctg gcggatcgcg
     4921 gctacgtgct ggaaaacggc catgtggtgc tctccgatac cggcgacgcg ctgctggcga
     4981 acgaagcagt gagaagtgcg tatttaggcg ggtaataaca cgttgattga taaggagtca
     5041 aaagactcct ttgagacagg tgacaaatgt aaaattgcct gatgcgctgc gcttatcagg
     5101 cctactgggt gagttgcaat atattgaatt tgcacgatct tgtaggccgg ataaggcgtt
     5161 tacgccgcat ctggcatgaa acgatgagta atctgtagag tttgattcag accttctatt
     5221 ttccgcttat ccgtgcccca tctcccattt tccctcaccc acgccgtcac cgccttgtca
     5281 tctttctgac accttactat cttacaaatg taacaaaaaa gttatttttc tgtaattcga
     5341 gcatgtcatg ttaccccgcg agcataaaac gcgtgaattc gcgcattcgg tacaacaaga
     5401 gagataaacg atgaaaccgt tacattatac agcttcagca ctggcgctcg gactggcgtt
     5461 aatggggaat gcacaggcag tgacgaccat tccgttctgg cattctatgg aaggggaact
     5521 gggtaaagag gtggattctc tggcccaacg ttttaacgcc gaaaatccgg attacaaaat
     5581 tgtaccgacc tataaaggca actacgaaca gaatttaagc gcggggattg ccgcatttcg
     5641 taccggcaac gctccggcta ttttgcaggt ttatgaagtt ggcaccgcca ccatgatggc
     5701 atcgaaagcc attaaaccgg tatatgacgt gtttaaagag gcggggattc aattcgatga
     5761 gtcgcagttt gtgccgacgg tttccggtta ctactccgac agcaaaacgg gccacttact
     5821 ctcccagcca ttcaacagct cgacccccgt tctctattac aacaaagacg ccttcaagaa
     5881 agcaggatta gacccggaac aaccgccgaa aacctggcag gatctggcgg actatgccgc
     5941 gaaactgaaa gcctccggta tgaagtgcgg ctacgccagc ggctggcagg gctggatcca
     6001 actggaaaac tttagcgcct ggaacggtct gccgtttgcc agcaaaaaca acggctttga
     6061 cggcacggac gcggtgctgg agttcaacaa gccggagcag gtgaaacaca tcgccatgct
     6121 cgaggagatg aacaagaagg gcgacttcag ctacgtcggt cgtaaggatg aatccaccga
     6181 gaagttctat aacggtgatt gcgcgatgac caccgcctct tccggttctc tcgctaatat
     6241 tcgtgagtac gccaaattta actatggcgt aggcatgatg ccttacgacg ccgatgcgaa
     6301 agatgcaccg caaaacgcca ttatcggcgg ggccagcctg tgggtgatgc agggcaaaaa
     6361 taaagaaacg tataccggcg tggcgaagtt cctcgacttc ctcgcgaagc cagaaaacgc
     6421 tgccgagtgg catcagaaaa ccggttatct gccaatcacc aaagcagcgt atgacctgac
     6481 ccgtgagcag ggcttttacg agaaaaaccc aggggcggat accgcgacgc gtcagatgct
     6541 gaataagccg ccgttgccgt tcaccaaagg gctgcgtctg ggcaacatgc cgcagatccg
     6601 cgtgattgtg gatgaagagc tggagagcgt gtggaccggt aagaagacac cacagcaggc
     6661 actggatacc gccgttgagc gtggaaatca gttgctgcgc cgctttgaga aatcgacgaa
     6721 gtcttaatca gtgtaatgtc ggatgcgttt cgcttatctg acctggcatc gcgtgtaggc
     6781 cggataagcg aagcgcatcc ggcacagttc aggaattaac cgtaatgtca tcatcccgtc
     6841 cggtgttccg ctcgcgctgg ctgccttatc tgctggtcgc gccgcagctc atcatcaccg
     6901 ttatcttttt tatctggcct gcgggcgaag cgttgtggta ctcgctacaa agcgtcgatc
     6961 cgtttggttt ctccagccag tttgtcggcc tggataactt cgtcacgctg ttccatgaca
     7021 gctactatct cgactccttc tggacgacga taaaattcag cacctttgtc accgtcagcg
     7081 gtttgctggt atcgctgttc tttgcggcgc tggtggagta catcgtgcgc ggcagccgtt
     7141 tctatcaaac cttaatgttg ctgccttacg ccgtggctcc cgccgttgcc gccgtattgt
     7201 ggatcttcct gtttaacccc ggtcgcgggc tgatcaccca ttttcttgcg gagttcggct
     7261 acgactggaa ccacgcgcaa aacagcggtc aggcaatgtt tctggtggtg tttgcctcag
     7321 tatggaagca aatcagctac aacttcctgt tcttctatgc cgcgctgcaa tccattcccc
     7381 gttcgttgat cgaagccgca gccatcgacg gtgcagggcc gattcgccgc ttctttaaga
     7441 ttgcgctgcc gcttatcgcc ccggtgagtt tcttcctgct ggtagtgaac ctggtgtatg
     7501 ccttcttcga caccttcccg gtgatcgacg ccgccacgtc cggcgggccg gttcaggcca
     7561 ccacgacgct gatttataag atctaccgcg aaggttttac cggactggat ctggcttcgt
     7621 ctgccgcaca gtcggtggtg ttgatgttcc tcgtcatcgt gctgacggtg gtgcagttcc
     7681 gctatgttga aagcaaggtg cgttaccaat gattgagaac cgtccgtggc tgacgatatt
     7741 cagccatacc atgctgatcc tcgggatcgc ggtgatcctc ttcccgctgt acgtggcgtt
     7801 tgtcgcggcg acgctggata aacaggccgt ctatgccgcg ccgatgacgc tcatccccgg
     7861 cacacatctg ctggaaaaca tccacaacat ctgggtgaac ggggtaggca cgaatagcgc
     7921 gccgttctgg cggatgttgc ttaacagctt tgtgatggcg ttcagcatta cgctcggcaa
     7981 aattaccgtc tcgatgctct cggcatttgc cattgtctgg tttcgttttc cgctacgtaa
     8041 cctcttcttc tggatgattt ttatcaccct gatgctgccg gttgaagtac gtatcttccc
     8101 gacggtggaa gtcatcgcca acctgcagat gctcgacagc tacgccggtt taacgctgcc
     8161 gctgatggcc tcggcgaccg ctactttcct gttccgccag ttctttatga cgctgccgga
     8221 tgagctggtg gaagccgcgc ggatcgacgg cgcatcgcca atgcgcttct tttgcgacat
     8281 cgtttttccg ctctccaaaa ctaatctggc ggcgctgttt gtgatcacct ttatctacgg
     8341 ctggaatcag tatttgtggc cgttgttgat tattaccgat gtggatctcg gcaccaccgt
     8401 ggcagggatc aaagggatga tcgctacagg cgaaggcacc acggaatgga actcagtgat
     8461 ggcggcgatg ttgttaacgc ttatccctcc ggtggtgatt gttttagtga tgcagcgtgc
     8521 cttcgtgcgc ggcctggtcg atagtgagaa ataagatggc aggactgaaa ttacaggcag
     8581 taaccaaaag ctgggatggt aaaacccagg tcattaaacc gctgaccctt gatgtggcgg
     8641 atggcgaatt tatcgtgatg gtcgggccgt ctggctgcgg gaaatcgacg ctgctgcgca
     8701 tggttgccgg gctggagcgg gtgacagaag gcgatatctg gatcaacgac cagcgcgtga
     8761 ctgaaatgga gccaaaagat cgcgggattg cgatggtgtt ccagaactac gcgctttatc
     8821 cgcatatgag tgtcgaagaa aacatggcgt gggggctgaa aattcgcggc atgggcaagc
     8881 agcaaattgc cgagcgcgtt aaagaagcgg cgcgcattct ggagctggac ggtctgctca
     8941 aacgtcgccc gcgcgagctt tccggcggtc agcgccagcg tgtggcgatg ggccgcgcga
     9001 ttgtgcgcga tccggcggtg ttcctgtttg atgagccgct ctctaacctc gatgccaagc
     9061 tgcgcgtgca gatgcgtctt gaactgcaac agttgcaccg tcgcctgaaa acgacttcac
     9121 tctacgttac tcacgatcag gttgaagcga tgacgctcgc ccagcgagta atggtgatga
     9181 acggcggcgt tgccgaacag attggcacac cagttgaagt ctacgaaaag cccgccagcc
     9241 tgtttgtagc gagttttatc ggcagtccgg cgatgaacct gctgacaggc cgcgtgaata
     9301 ccgaaggcac gcatttcgaa ctggacggcg gtatcgtgct accgctaaac ggtggctacc
     9361 gtcagtatgc cgggcgtaaa atgactctcg gcattcgccc ggaacatatt gcgctaagct
     9421 cgcaagcaga aggtggcgta ccgctggtga tggatacgct ggagatcctc ggcgcagata
     9481 acctggcgca cggacgctgg ggcgagcaga agctggtggt gcgactggcg catcaggagc
     9541 gcccgacggc aggcagcacg ctgtggctgc atctggcgga aaatcagctg catctttttg
     9601 atggtgaaac aggacaacga gtatgagtaa ctggccttat ccccgcatcg tcgctcatcg
     9661 tggcggcggt aagctggccc ccgaaaacac cctggcggca atcgacgttg gggcaaaata
     9721 cggtcataag atgatcgaat ttgacgcgaa gttatcgaaa gatggcgaga tcttcctgct
     9781 ccatgacgac aatctcgaac gcaccagcaa cggctggggc gtcgcgggtg aactggcagg
     9841 atttactgcg cgtggatgcg ggcagttggt acagcaaagc gtttaaaggt gagccgctgc
     9901 cgttgctttc gcaggtggcg gaacgctgtc gcgaacacgg gatgatggcg aatatcgaaa
     9961 tcaaacccac cactggcact ggaccattaa cgggcaaaat ggtggcgctg gcggcacgcc
    10021 aactgtgggc cggtatgacg ccgccgctgc tgtcatcgtt tgagattgat gctttagaag
    10081 ctgcacagct ggcggcaccg gaactgccgc gtggtttatt gcttgatgag tggcgcgacg
    10141 actggcgcga actgaccgcg cggctgggct gcgtctctat tcatctcaat cataagttac
    10201 tcgataaagt gcgagtgatg cagttgaaag acgccggact gcggattctg gtttataccg
    10261 tcaataaacc ccagcgcgcg gcagagttgc tgcgctgggg cgtggattgc atctgtaccg
    10321 atgcgattga cgtgattggt ccgaacttta cggcccaata gttttcaacg gaatgtcagg
    10381 ctgcggcgtg ctgggctgat tcagcatgtc gccgtttctc ctctccggca gcatatgctg
    10441 ctgattcaac gaactatccg gattacggtt gctgtttaac atcccgccgt tggtgttggg
    10501 cagcatttgc tgccgggcgg gatttcgctc ccccggctgt gactgcaaca cccgctgaga
    10561 attattgttt atctggtttt ctaaatgctg ctgttgcaac tgagtttgcg ttttcagttg
    10621 ctgattcagc atcccttttt gctggatttg ctgagtctgc atctgggttt gcatccgctg
    10681 ctggctgggt atctgatacc ccggctggtt agggttgttc agagtattaa tgggctgtgc
    10741 aaagccgaca aacggcagga gtgccgtaag aatcagaagt cgtttcatcg cgtatcctcc
    10801 tctgaagata tcctttaagt ttactcgctt cccgacaaaa cgatgattaa ttcagagtta
    10861 tataccaggc ttagctgggg ttgcccctta atctctggag aataacgatg ataaaaccga
    10921 cgtttttacg ccgggtggcc attgctgctc tgctctcagg aagttgtttt agcgccgccg
    10981 ccgcgcctcc tgcgccgccc gtctcgtatg gtgtggagga agatgtcttc cacccggtac
    11041 gcgcgaaaca gggaatggta gcgtctgtgg acgccactgc cactcaggtg ggggtggata
    11101 ttctcaagga gggcgggaat gccgttgatg ccgccgtggc ggtgggctac gcgctggcgg
    11161 taacgcatcc gcaggcaggg aatctgggcg gtggtggttt tatgttaatc cgctcgaaaa
    11221 atggcaatac cacggctatc gatttccgcg aaatggcacc cgccaaagcg acccgcgata
    11281 tgttcctcga tgatcagggc aacccggaca gcaaaaaatc actcacttcg catctggctt
    11341 ccggcacacc gggtacggta gcaggtttct cgctggcgct ggataaatac ggcaccatgc
    11401 cgctgaacaa agtcgtgcag cccgcgttta aactggcacg cgatggtttt atcgttaacg
    11461 acgcgctggc tgacgatctc aaaacctacg gtagcgaagt gttgccgaat cacgaaaaca
    11521 gtaaagctat cttctggaaa gagggcgagc cgctgaaaaa gggcgacacg ctggtgcagg
    11581 cgaacctggc aaagagcctg gagatgattg ctgaaaacgg cccggacgaa ttctataaag
    11641 gcacgattgc ggaacagatc gcccaggaga tgcagaaaaa cggtggcttg atcactaaag
    11701 aagatttagc agcctataaa gcggtcgaac gcactccgat aagcggcgat tatcgcgggt
    11761 atcaggttta ctccatgcca ccgccatcct ccggcgggat ccatatcgta caaatcctca
    11821 atattctgga aaacttcgat atgaagaaat acggctttgg cagcgccgat gcgatgcaaa
    11881 tcatggcaga agcggagaaa tacgcctacg ccgaccgctc ggaatatctt ggcgacccgg
    11941 attttgtcaa agtaccgtgg caggcgctga ccaataaagc ctatgccaaa tctattgccg
    12001 atcaaattga tatcaataaa gcgaagccat ccagcgaaat tcgccccggc aagcttgcgc
    12061 cttatgagag taatcaaact acccattact cagtggtgga taaagatggt aacgcggtgg
    12121 cggtgaccta tacgctgaac accaccttcg gtacgggcat tgtcgcgggc gagagcggta
    12181 ttctgcttaa taaccagatg gatgatttct ccgccaaacc gggcgtaccg aacgtttacg
    12241 ggctggtggg cggtgatgcc aacgccgtcg ggccgaacaa acgcccgctg tcgtcgatgt
    12301 cgccgaccat tgtggtgaaa gacggtaaaa cctggctggt taccggtagc ccaggcggta
    12361 gccggatcat cactacagtg ctgcaaatgg tggtgaatag catcgattat ggcatgaacg
    12421 tcgccgaagc gaccaatgcg ccgcgtttcc accatcagtg gttgccggac gagctgcgtg
    12481 tcgaaaaagg gtttagcccg gatacgctca agctgctgga agcaaaaggt cagaaagtgg
    12541 cgctgaaaga ggcgatgggc agtacacaaa gcattatggt tgggccggac ggtgagttgt
    12601 acggcgcatc cgacccgcgc tcggtggatg atttaacggc ggggtactaa ggttagcggc
    12661 cctcttcgtg ggaagagggc tattttgtca gggcaagccg aaggtagcct tttttatttc
    12721 gtaatcctgt agatattctt ccagcggctt tgccgttccc agagaatgaa tttcaccact
    12781 gtctttatca ataataaaag gtgcgttacc agctaagcgc gcggcctcat ctccagtttc
    12841 gagaaattct cgtgcttcga aacagaaata ccagccctgg ctaaagcgtc catgtagagt
    12901 aatgacgacc gggagatctg catcatcaag gtaatggttc
//
LOCUS       DAPGWB010000126        12923 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.127, whole genome shotgun sequence.
ACCESSION   DAPGWB010000126 DAPGWB010000000
VERSION     DAPGWB010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12923
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.127"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(121..1659)
                     /gene="cadC"
                     /locus_tag="RHX79_003471"
     CDS             complement(121..1659)
                     /gene="cadC"
                     /locus_tag="RHX79_003471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylation/transport transcriptional
                     activator CadC"
                     /protein_id="HDV2198602.1"
                     /translation="MQQPVVRVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHS
                     GEVLSRDELIDNVWKRSIVTNHVVTQSISELRKSLKDNDEDSPVYIATVPKRGYKLMV
                     PVIWYSEEEGEEIMLSSPPPIPEAVPATDSPSHSLNIQNTATPPEQSPVKSKRFTTFW
                     VWFFFLLSLGICVALVAFSTLDTRLPMSKSRILLNPRDIDINMVNKSCNSWSSPYQLS
                     YAIGVGDLVATSLNTFSTFMVHDKINYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSI
                     KLVDNADGSTMLDKRYVITNGNQLAIQNDLLESLSKALNQPWPQRMQETLQQILPHRG
                     ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPL
                     DEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSW
                     LNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENGIFQTSVPYVVPYLDKF
                     LASE"
     gene            complement(2276..2351)
                     /locus_tag="RHX79_003472"
     tRNA            complement(2276..2351)
                     /locus_tag="RHX79_003472"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2316..2318),aa:Phe,seq:gaa)
     gene            complement(2458..3033)
                     /locus_tag="RHX79_003473"
     CDS             complement(2458..3033)
                     /locus_tag="RHX79_003473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV2198603.1"
                     /translation="MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPD
                     KEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIA
                     ACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRML
                     VNRSQADVDTAHRLAEDILRFARCRQGGALT"
     gene            complement(3070..4767)
                     /gene="dsbD"
                     /locus_tag="RHX79_003474"
     CDS             complement(3070..4767)
                     /gene="dsbD"
                     /locus_tag="RHX79_003474"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDV2198604.1"
                     /translation="MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFAFDFQQN
                     QHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTL
                     PVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAASQPVSVSQQEQHT
                     AQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMA
                     LTYTALGLVVAAAGLQFQAALQHPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLT
                     LMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYAL
                     GMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDVWGLRLWSA
                     LGVAFFGWAFITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTAQTQTHLNF
                     TQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQA
                     NVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP"
     gene            complement(4743..5081)
                     /gene="cutA"
                     /locus_tag="RHX79_003475"
     CDS             complement(4743..5081)
                     /gene="cutA"
                     /locus_tag="RHX79_003475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HDV2198605.1"
                     /translation="MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIP
                     GATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTD
                     YLSWLNASLR"
     gene            complement(5197..6498)
                     /gene="dcuA"
                     /locus_tag="RHX79_003476"
     CDS             complement(5197..6498)
                     /gene="dcuA"
                     /locus_tag="RHX79_003476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuA"
                     /protein_id="HDV2198606.1"
                     /translation="MLVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGN
                     IPFDVISIIMAVIAAISAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFA
                     GTGNISLATLPVIAEVAKEQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGH
                     GISYLHLLSVVIPSTLLAVLVMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIE
                     IKSGAKTSVWLFLLGVVGVVIYAIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVI
                     CKVDTDNILNSSTFKAGMSACICILGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLA
                     VIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQ
                     MDDTGTTRIGKFVFNHPFFIPGTLGVALAVCFGFVLGSFML"
     gene            complement(6616..8052)
                     /gene="aspA"
                     /locus_tag="RHX79_003477"
     CDS             complement(6616..8052)
                     /gene="aspA"
                     /locus_tag="RHX79_003477"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313147.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDV2198607.1"
                     /translation="MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDI
                     PEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGA
                     GTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL
                     IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNI
                     QRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGA
                     YVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPE
                     VVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCIN
                     GITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTE
                     AELDDIFSVQNLMHPAYKAKRYTDESEQ"
     gene            8389..8865
                     /gene="fxsA"
                     /locus_tag="RHX79_003478"
     CDS             8389..8865
                     /gene="fxsA"
                     /locus_tag="RHX79_003478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418564.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HDV2198608.1"
                     /translation="MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGM
                     SLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLP
                     PVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD"
     gene            complement(8881..10137)
                     /gene="yjeH"
                     /locus_tag="RHX79_003479"
     CDS             complement(8881..10137)
                     /gene="yjeH"
                     /locus_tag="RHX79_003479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine/branched-chain amino acid
                     transporter"
                     /protein_id="HDV2198609.1"
                     /translation="MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWA
                     WPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPA
                     ALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIV
                     AIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFP
                     RALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGY
                     LACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIH
                     ALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKS
                     LYALIMLAGLWLLLPKRKTPENGITT"
     gene            10413..10706
                     /locus_tag="RHX79_003480"
     CDS             10413..10706
                     /locus_tag="RHX79_003480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDV2198610.1"
                     /translation="MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG
                     NGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA"
     gene            10750..12396
                     /gene="groL"
                     /locus_tag="RHX79_003481"
     CDS             10750..12396
                     /gene="groL"
                     /locus_tag="RHX79_003481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120975.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDV2198611.1"
                     /translation="MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITE
                     GLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGK
                     LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP
                     FILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID
                     GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAP
                     LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA
                     SVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM"
     gene            12534..12887
                     /locus_tag="RHX79_003482"
     CDS             12534..12887
                     /locus_tag="RHX79_003482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HDV2198612.1"
                     /translation="MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQ
                     LIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFV
                     PTDSQIIGQVYKCPN"
BASE COUNT         3387 a         3117 c         3273 g         3146 t
ORIGIN      
        1 ggttaaattt atgtaataaa aattatgcgg caaataaatt gccgcaacat attataccaa
       61 cagaaacata caaaaactca acaacaaata ttcccgagca taaatcaacc cgggagttac
      121 ttattctgaa gcgagaaatt tgtcgagata aggtacaaca taaggaacag aagtctggaa
      181 tataccattt tcaatccagt aaagggtgtt tgcccctggg cgtaaattaa aggcggtgag
      241 atatgcatca gccgcttccc ggttcatccc cttcatttca taaaccttgc caagcaacac
      301 ataatttagc caggacattt caagatcaat gccagtattt atcgcctggt aagactcatc
      361 tgttttacct tttaccagag cactgaccgc ttttatttga tatataatgg acaggttatt
      421 caattccggc agtgtaacaa tgttgtctat ttctgtgttc agtgctgcta attgtttttc
      481 atctaaagga tgttgagaat ggcgcacgat atcaactaat gctttttctg ctctcgcgta
      541 ggtaaattct ggggatgatt gaacaatctc acctaataat tcactggcac gattcaatga
      601 tttatcatcg ccatgcagta aataatcatg tgcctgataa aaattagtta ataacgcacc
      661 acgatgaggc aatatttgct ggagcgtctc ctgcattcgt tgtggccacg gttggtttaa
      721 cgcttttgat aaactctcca gtaaatcatt ttgaatcgcc agctgattac cgttagtgat
      781 gacataacgt ttatccagca tggttgaacc atctgcattg tctaccaatt ttatcgacat
      841 aaagcattgt tgagcacggt attggcgctg attaacaaac gcaatagata atgttttacc
      901 ggaactgctc ggttcatcaa tgttgtagtt gattttgtca tgcaccataa aggtggagaa
      961 ggtgttaagt gatgtcgcca ccaaatcacc cacgcctatc gcgtaagaga gctgatacgg
     1021 ggaactccag ctgttacaac ttttatttac catattaatg tcaatatcgc gtggattgag
     1081 caaaatacgc gatttgctca taggaagacg tgtatcaaga gttgaaaacg ctaccagtgc
     1141 tacacagata cctaacgaca acaggaaaaa aaaccatacc caaaaggtag tgaatcgttt
     1201 gcttttaact ggggattgtt caggtggcgt tgcggtgttt tgaatgttaa gactgtggga
     1261 gggagaatct gtggcaggaa ccgcctctgg tataggggga ggcgaagata gcattatttc
     1321 ctctccctct tcttcgctgt accagataac cggcaccatt aatttatagc cgcgctttgg
     1381 tacagtagcg atatagacag gactatcttc atcattatct tttaatgact tacgtagttc
     1441 tgagatactc tgcgtcacaa catgattggt gacaatactt ctcttccaga cattatcgat
     1501 aagttcatcc ctgctaagta cttcgccact gtgttgagca aagaaaacca gaagatcgat
     1561 taatctcggc tcaagggtaa gttgacgccc attgcggcta atttggttta tggacggagt
     1621 aacaagccat tcgccaacgc gaactacagg ttgttgcata atagaaactc attcgaaaag
     1681 ggaatgatgc aatgataatt gccacaacct atttttacca tctatagatg ggtttattta
     1741 catattattg gtgaatgcaa gacgttattt ttaccagcca taaacttctt gattacatag
     1801 tattacgaaa ggattttact gagaaccaga agtaatattc cttaccatca aaattcatca
     1861 tctttgccaa agaaaaatgt tcagaaaata atccatggaa aattgtccgg agcgcttact
     1921 attttaatgg attgttagtc tttgcatgag caagcggact gatacatttc tctttgttct
     1981 tattcagaaa atctcatcag tcggcgttca gaccggtgtt gtgctttatg gatgcgttac
     2041 gctcctgatg acgtcatttg acgttcaaca acatcacggg gccgcacgac atttcacgtc
     2101 agttagtgct atcgctcagg aacaaatttt cccgaattgg gatatgcccg caaattgctg
     2161 gtgatgtggg gagaatctgg ttgagttcgg gagaattgat ttggaggcag aacgcttaaa
     2221 ttgtggcgtc cagaaacgaa aaacggacct ccgtggaggt ccgttgatat gaatttggtg
     2281 cccggactcg gaatcgaacc aaggacacgg ggattttcaa tcccctgctc taccgactga
     2341 gctatccggg caacggggcg cattaaaccg taatctgcac atctcgtcaa cctaatttca
     2401 gtaaaagcga ttcaactgct taagattgcg gcaaatcgct tcttttctgt gtttctgtca
     2461 ggtcaatgca ccaccctggc ggcagcgggc gaagcgcagg atatcttccg ccagccgatg
     2521 tgcagtgtcg acatccgcct ggctacgatt caccagcatt cggcttaaac agccttccag
     2581 caccagttcc atctgctttg ctaccatcgc cggatcgtca acttccagtg tggttaacag
     2641 ttcgtgggtg aaatcgtagg ccgcgctttt ttgctgatcg gccagttgat gaatagggtg
     2701 gccaggatcg ggataaaacg tacaggcagc gataaataga cagcccggat agcggttgtt
     2761 tttaacgcac tccgataacg cctgataacg tgccagcagc ttttgttcgg cggtttgcgt
     2821 ttcgtccagc atcagctgac gacgccagac atctatctgt tggctaagat aacgcagcgc
     2881 atcgtagagg attgcctctt tgtctggcca gaagcggcgt agctcgtcca gtggataatc
     2941 cacacgttca gcaaccatct ccagcgtggt gttggcaatc ccttgtaatt ctaataattt
     3001 cagggcttct cccagtacat cttcacgttg cacgctattt tcctccgtct ttcccactgc
     3061 aagtgtcgtt cacggttggc gatcgcgcaa atgtgcgctg aaggtttcag catccataaa
     3121 gcccgtgacg cgtgcttgtg gatgctcctg gccttgtccg tcaaaaaaga gaattgtcgg
     3181 taggccaagg acattaagat gctttaacag cgccacatct tgtgcgtcgt tggccgtgac
     3241 gttggcctga agtaagaccg tgtctgctaa cgctttttgc acctgcgggt cgctgaaggt
     3301 gtatttctca aactctttac aggcgacgca ccagtcggca taaagatcta acatcaccgg
     3361 tttgcctttg gcttcaacga gcgcctgatt taactcatct accgttttga tttgtgtaaa
     3421 gttgagatgc gtctgagttt gcgcggtatg cgtcgcacca aatgcccaat cctgaagtgg
     3481 gcgcacgcta accaatgccg ctgccagcag gattatttgc accacgcgca tccagccgcg
     3541 tttagcctgt aggctggtga taaaggccca gccaaagaat gcgacaccca gcgccgacca
     3601 caagcgtaat ccccatacat caccaatcac tcgctccagc aggaagaccg gcagtgcgag
     3661 gatcacaaaa ccaaacgcgg ttttgacttg ttccatccac gggccgcttt tcggcagcaa
     3721 gcggttacca aagacggtaa ttagcatcag cggcaggccc atgcccaacg catagagata
     3781 aagcgtgccg ccgcccagcc acatgttccc gctttgggcg atatacagca gaatcgcgct
     3841 aagcggtgcg gtggtgcatg gtgaacagat cagtccggca atcgccccca taacaaacac
     3901 accgccaggt gagccgccct gttggcgatt gctcatcaac gtgagacgtg tttgcagcga
     3961 agaggggagt tgtagagtaa acaagccaaa cattgacatc gccagcaagg taaagacgat
     4021 ggcgaggcca atgagcacgt atgggtgctg tagcgccgcc tggaactgta accctgcggc
     4081 ggcaactacc agacccagcg ccgtgtaagt cagtgccatc ccctgcacat aaataaaggt
     4141 cagcaacaat gctctggcag tggagagccg ctgtttacca cccagcacga tgccagaaat
     4201 cagtgggtac attggcagca cgcatggcgt aaaggcgata ccaataccga tcaacaacgc
     4261 ccagagcgcg gaaaagggca attgcgcggt gtgctgctcc tgctgcgaaa cagacacagg
     4321 ctgtgacgct gcgttgttgg cgaccacttc gcttaacgga acggttttgg tttctggcgg
     4381 ataacagaaa ccggcatcag cacagccctg gtaggtgaca gttaacgtcg ctcccgcact
     4441 cgcctggttg atggttacgg gaagcgtcag ccgatcgcgg taaatctcgc ttttgccgta
     4501 aaactcatct tcatgccaga cgccttgcgg cagctgcacg tcggcaattt tcgcgtgttc
     4561 cggcgtaatg cggatctgtt tacggtagag gtagtaaccg tctttgatct gccaggtcag
     4621 attcaggtca tgttggtttt gctgaaaatc aaaagcaaag gcttgatccg cggggacaaa
     4681 ttgtgaacgt cccggcgcgt cgaataatcc ggcaaaaacg gaagtgctgc aaagtagcag
     4741 gatcagcgta aagatgcgtt gagccatgag aggtaatctg tgtctccgtg tgtaacaggt
     4801 aaaaccagaa gttccggggt ttgatatgga tgatgagact tcaggcattc cagcagtgcc
     4861 tgctggtgag atacggtagt ttttaaaatc atctgcactt cgtattcttg ctccagctta
     4921 ccttcccagt aatagagaga ggtagcgccg gggatcaagg tcgcgcaggc cgccagtttt
     4981 tccgccagca ctttggcggc taaatcctgg gctgtcgctt catccggtgc ggtacatagc
     5041 accacgacag acgcggtatt cgaacttttt tcatcaagca taaacacctc gcaagaacag
     5101 atggaaccgc aagagagagg tcactataca acggacgggg gaaggatgtt agtcggcggg
     5161 aaagaaagcg gggcgtgaac gccccgcgat tggtcattac agcatgaagc tacccagcac
     5221 gaagccgaag caaacggcca gggcaacacc cagagtaccc gggatgaaga acggatggtt
     5281 gaagacgaat ttaccgatac gggtagtacc cgtgtcatcc atctgtaccg cagcaaccag
     5341 cgtcgggtag gtcggcagaa tgaacagacc agacaccgca gcgaaagaag caacagcggt
     5401 cagcggagaa acgttcagtg ccagagccat cggcatcagg gcttttgcgg ttgcagcctg
     5461 agagtacaac agagcagaag caaagaagaa gatgacggcc agcagccacg gatgaccctg
     5521 aatcacttca ccagcggtat ctttgatcca gtcgatgttg ttggaaacga aagtatcgcc
     5581 cagccacgca acacccagga tacaaataca ggcgctcata cctgctttga aggtgctgga
     5641 gttgaggatg ttgtcggtat caactttaca gataacggtg gtcagagttg caacgctgag
     5701 catgatgatc aggattgcgt tggtggtgtt catcagcggt ttttcaacca gacccatgct
     5761 tgggctgttg atgattgcat agataaccac gccaactacg cccagcagga acagccagac
     5821 ggacgttttt gcaccggatt tgatttcaat ctgcttttca ccgcgcagtt caaccaggcc
     5881 ctcttccaga cgcttgcgat aaatcggatc gtcagagagt ttggagttga acagcatagt
     5941 gaccagaaag gacatcacca gaaccgccag cagggtggac gggatgacca cggagagcag
     6001 atggaggtag ctgatgccat gaccttccat cacggaagac atgtaaacca ctgccgctga
     6061 gattggcgat gcggtgatcg caatctgcgc ggataccact gcagtagaca gcggacggca
     6121 aggtttgacg ccttgttcct tcgcaacttc agcgataact ggcagtgtcg ccagagatat
     6181 gttgccagta ccagcaaaga tagtcaggaa ataggtcacg atcggtgcga ggatcgtgat
     6241 gtatttcggg ttacggcgca gcagcttttc tgtctgatga accagatagt ccagaccgcc
     6301 agcaacctgc atggcagaaa tagcggcgat aaccgccatg ataatggaaa tgacatcgaa
     6361 cgggatgtta ccgggtttaa cgccaatagc ggcaagaacc agcaccccca atccgcctgc
     6421 aaaaccaata cctattcccc ccaatctggc gcccaagaag atcgccagca aaactatgat
     6481 gagttctaca actagcatat tagccttcct tgttttttaa caagttgata ttaggttgtt
     6541 atttttaagt tactgctcac aagaaaaaag gcacgtcatc tgacgtgcct tctttatttg
     6601 tactaccctg tacgattact gttcgctttc atcagtatag cgttttgctt tgtaagccgg
     6661 gtgcatcaga ttctgtacgg agaaaatatc gtcaagttcc gcttcagtca acagaccgcg
     6721 ttccagaacg acttcacgta cactcttacc ggtttcggca cagattttac ccacgatgtc
     6781 accgttgtgg tgaccgatga acgggttcag gtaagtaacg ataccgatag agttgtaaac
     6841 gtaaccttcg cacacttctt tgttagcagt gatgccgtta atgcattttt ccagcaggtt
     6901 gtagcaagcg ttggtcagaa tgtgaacgga ttcgaacatg gcctggccaa tgaccggctc
     6961 cataacgttc aactgcagct gacctgcttc tgctgccatg gtaacagtgg tgtcgttacc
     7021 gatgactttg aagcatacct ggttaaccac ttccggaaca accgggttta ctttagctgg
     7081 catgatggaa gagcccgcct gcagttccgg caggttgatc tcgttcaggc cggcacgtgg
     7141 accagaagag agcaagcgca ggtcgttaca gattttggac atcttcacag ccaggcgttt
     7201 cagcgcgccg tgaaccataa cataagcgcc gcagtcagag gtcgcttcga tcaggtcttc
     7261 agccggtacg catgggaagc cagtgacttc agccagtttt ttcactgcca gcggagagta
     7321 ctctttcggc gtgttcagac cagtaccgat tgctgttgcg ccaaggttaa cttccagcag
     7381 cagttcagcg gtacgttgga tatttttcac ttcttctttc agcaggatgc tgaaagcgcg
     7441 gaattcctga ccgagggtca tcggtactgc gtcctgcagc tgggtacgac ccattttcag
     7501 gatgtcctgg aattcgacag ctttacgttc aaagccttca cgcagttggt taatcgcatc
     7561 taccagctta atcagggaag agtaaactgc gatacggaaa ccggtcgggt aggcgtcgtt
     7621 agtggactga catttgttaa catggtcgtt cgggttcagg tactgatatt cacctttctg
     7681 gtgacccatc agttccagac cgatattggc cagcacttcg ttggtgttca tgtttacgga
     7741 agtacctgcg ccgccctggt agacgtctac cgggaactga tccatgcatt ttccgttgtt
     7801 caggacttca tcacatgcgg caatgatggc attcgctaca cttttaggaa tggtttgcag
     7861 ctctttgttt gccatagctg cggctttttt aaccattacc ataccgcgaa caaattcagg
     7921 aatatcactg attttgttgt tgctgatata gaagttttca atcgctctca gagtgtgaac
     7981 accatagtag gcatcagctg gaacttccct ggtacccaac agatcttctt cgatacgaat
     8041 gttgtttgac atgtgaacct tctttttcaa gctgccaatg atttgcttta aacacacaga
     8101 atatatgtgg tttcgaatgt ttttcgaccg acgattatcc cctgcatcga ccgaataccc
     8161 gagatcatat gctgcttgag gatttctacc gtaatctgga tcactttaag tgtcggtttt
     8221 taccccttaa ttattaattt gtgaaataga tcaccgcttt gggattacta ccaaaaatag
     8281 ttgcgcaaac atcttgaaat tttgctaatg accacaatat aagctgaacg cgattcgcaa
     8341 cccattcagg tagccgggtt ttaccggctg ctattacagg agaaaccttt gcgctggtta
     8401 ccttttattg ccattttcct ttatgtctat attgagattt caatctttat tcaggttgcc
     8461 catgtattgg gggtattgct gaccctcgtg ctggttatat tcacgtcagt tatcgggatg
     8521 tcactggtac gtaaccaggg ctttaagaat ttcgtgctga tgcagcaaaa aatggcggcg
     8581 ggtgaaaacc cagcggcgga gatgattaaa agtgtttcgc tgatcattgc cggtttgctg
     8641 cttttattac cgggcttttt caccgacttc ctcggtcttc tgcttttatt accgccggtg
     8701 caaaagcatc tgacagtgaa gttgatgccg catttgcgct tttctcgtat gccaggcggc
     8761 ggttttagcg ccgggaccgg tggcggtaat acttttgatg gtgagtacca gcgaaaggat
     8821 gatgagcgcg accgccttga tcataaagac gatcgccagg attaatgtcg aaacgccgga
     8881 ttatgtggtt atgccatttt ccggcgtttt tcgttttggc agcaacagcc ataaccccgc
     8941 cagcatgatc agcgcataga gacttttcca gccgaccatt gccagtaaca gaacgcataa
     9001 cagcccgcca accaccgcca gtagtcgata acgtccttgc aataatttac agcctgccag
     9061 catgcataac agataaatca taataaagat gccattggca taaataataa gagcgtccag
     9121 attgatctct aaagcatgaa tcaccaacgt gctcaccaca cagcagccga gcaccgcatt
     9181 gagggcatta ttcgggatat ggcgagaaga gaggcgtgcc aggtagtggt caggattatg
     9241 ttgcgcctgc gaccagacca ggcgggcgaa gctctgtata taaatgttga gactggcaaa
     9301 gcaggccaga tagccaatca cgcaggcaat ccataacgct cctacaccga acaactgcac
     9361 tacaattttt ggaagcgatg ctgccgccgc cattttttca ccataggcgt cgaagtgtaa
     9421 gacgactacc gtacagcccc agtagactaa tcctgccagc agcagaccaa tcatcaatgc
     9481 gcgaggaaaa tcacgctctg gatttttaaa ttccgaggca agatgggcaa atgcttccag
     9541 accgacaaaa caccagaaca tcactgataa cgcagcaaat aacccggtaa gttcgatatt
     9601 accaggtgcc gggaagggga tattcgcagg tttgatatcg cccgcccacc agatagcgac
     9661 aatcagcgcg acgataagtc cggcaataac ggtttgtaga ttagcactgg aactggcacc
     9721 gcgagtaccg atataccaca ccagcgccag cgtaccgagt tctgccaaca acagttgcca
     9781 gctatgccag ccaaacattg cctggccgaa cccggcggca atttgtagcg cggcaggcaa
     9841 acccacggga atgaccgata aaaacaacca gccggtgact cgctcaagtc gcgaaccaaa
     9901 cgccataccg acgaagtgcg cgacaccgcc tgcgctggga tagtggcgac ccagaatcgc
     9961 aaacacaatc gcaatcggga acactaagat aatcaaaacg ggccacgccc acaggctgtt
    10021 attgcccgct accagcgcag ctaacgcagg aacggcaaac acgccagtgc ctaataatga
    10081 cgtcgatagc aggccaatgc cttgggccag ccccagttct tgtttgagtc cactcatggg
    10141 ttgatatccg attgcgccca aattttgggc aactgcgtag attttcgatg gtagcacaat
    10201 cagattcgct tatgacggcg atgaagaaat tgcgatgaaa tgtgaggtga atcagggttt
    10261 tcacccgatt ttgtgctgat cagaattttt tttctttttc ccccttgaag gggcgaatcc
    10321 tcatccccat ttctctggtc accagccggg aaaccacgta agctccggcg tcacccataa
    10381 cagatacgga ctttctcaaa ggagagttat caatgaatat tcgtccattg catgatcgcg
    10441 tgatcgtcaa gcgtaaagaa gttgaaacta aatctgctgg cggcatcgtt ctgaccggct
    10501 ctgcagcggc taaatccacc cgcggcgaag tgctggctgt cggcaatggc cgtatccttg
    10561 aaaatggcga agtgaagccg ctggatgtga aagttggcga catcgttatt ttcaacgatg
    10621 gctacggtgt gaaatctgag aagatcgaca atgaagaagt gttgatcatg tccgaaagcg
    10681 acattctggc aattgttgaa gcgtaatcct cgcacgacac tgaacatacg aatttaagga
    10741 ataaagataa tggcagctaa agacgtaaaa ttcggtaacg acgctcgtgt gaaaatgctg
    10801 cgcggcgtaa acgtactggc agatgcagtg aaagttaccc tcggtccgaa aggccgtaac
    10861 gtagttctgg ataaatcttt cggtgcaccg accatcacca aagatggtgt ttccgttgct
    10921 cgtgaaatcg aactggaaga caagttcgaa aatatgggtg cgcagatggt gaaagaagtt
    10981 gcctctaaag cgaacgacgc tgcaggcgac ggtaccacca ctgcaactgt actggctcag
    11041 gctatcatca ctgagggtct gaaagctgtt gctgcgggca tgaacccgat ggacctgaaa
    11101 cgtggtatcg acaaagccgt taccgctgca gttgaagaac tgaaagcgct gtccgtaccg
    11161 tgctctgact ctaaagcgat tgctcaggtt ggtaccatct ccgctaactc cgacgaaacc
    11221 gtaggtaaac tgatcgctga agcgatggac aaagtcggta aagaaggcgt tatcaccgtt
    11281 gaagacggta ccggtctgca ggacgaactg gacgtggttg aaggtatgca gttcgaccgt
    11341 ggctacctgt ctccttactt catcaacaag ccggaaactg gcgcagtaga actggaaagc
    11401 ccgttcatcc tgctggctga caagaaaatc tctaacatcc gcgaaatgct gccggttctg
    11461 gaagctgttg ccaaagcagg caaaccgctg ctgatcatcg ctgaagatgt tgaaggcgaa
    11521 gcgctggcaa ctctggttgt taacaccatg cgtggcatcg tgaaagttgc tgcggttaaa
    11581 gctccgggct tcggcgatcg tcgtaaagct atgctgcagg atatcgcaac cctgactggc
    11641 ggtaccgtaa tctctgaaga gatcggtatg gagctggaaa aagcaaccct ggaagacctg
    11701 ggtcaggcta aacgtgttgt gatcaacaaa gacaccacca ctatcatcga tggcgtgggt
    11761 gaagaagctg caatccaggg ccgtgttgct cagatccgtc agcagattga agaagcaact
    11821 tctgactacg accgtgaaaa actgcaggaa cgcgtagcga aactggcagg cggcgttgca
    11881 gttatcaaag taggtgctgc taccgaagtt gaaatgaaag agaaaaaagc acgcgttgaa
    11941 gacgccctgc acgcgacccg tgctgcggta gaagaaggcg tggttgctgg tggtggtgtt
    12001 gcgctgatcc gcgtagcgtc taaactggct gacctgcgtg gtcagaacga agaccagaac
    12061 gtgggtatca aagttgcact gcgtgcaatg gaagctccgc tgcgtcagat cgtcctgaac
    12121 tgcggcgaag aaccgtctgt tgttgctaac accgttaaag gcggcgacgg caactacggt
    12181 tacaacgcag caaccgaaga atacggcaac atgatcgaca tgggtatcct ggacccaacc
    12241 aaagtaaccc gttctgctct gcagtacgcg gcttctgtgg ctggcctgat gatcaccacc
    12301 gagtgcatgg ttaccgacct gccgaaaaat gatgcagctg acttaggcgc tgctggcggt
    12361 atgggcggca tgggtggcat gggcggcatg atgtaattgc cctgcacctc gcagaaataa
    12421 acaaaccccc gggcagaaat gtctgggggt ttttcttttg gtcatctttc tagtataaga
    12481 ttcagacacg gacgacgcga gtggcgtcca gctcattgat tatggggaat aacatgcacg
    12541 taaaatactt agcagggatt gtcggtgccg cgctactgat ggcgggttgt agctccagca
    12601 acgaattgag tgctgccggt cagagtgtac gcattgtgga cgagcagcca ggcgcagagt
    12661 gccagctgat tggtactgcg acaggtaagc aaagcaactg gctttccggg caacacggag
    12721 aagaaggcgg ttctatgcgc ggcgcagcaa acgatctgcg caaccaggcg gctgcaatgg
    12781 gcggtaacgt gatttatggc atcagtagcc cgtcgcaggg aatgttgtcc agttttgtcc
    12841 cgacggatag ccagattatc ggccaggttt ataagtgccc gaactgatgt gatggtgaca
    12901 aacgtataat tgccagatgc gct
//
LOCUS       DAPGWB010000127        12733 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.128, whole genome shotgun sequence.
ACCESSION   DAPGWB010000127 DAPGWB010000000
VERSION     DAPGWB010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12733
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.128"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            90..1604
                     /gene="caiT"
                     /locus_tag="RHX79_003483"
     CDS             90..1604
                     /gene="caiT"
                     /locus_tag="RHX79_003483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-carnitine/gamma-butyrobetaine antiport BCCT
                     transporter"
                     /protein_id="HDV2198613.1"
                     /translation="MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVF
                     SYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSA
                     AVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYF
                     FFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTEC
                     MQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV
                     SGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIF
                     LARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVAR
                     AIIETWAALPLSTATIWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRI
                     GWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD"
     gene            1635..2777
                     /gene="caiA"
                     /locus_tag="RHX79_003484"
     CDS             1635..2777
                     /gene="caiA"
                     /locus_tag="RHX79_003484"
                     /EC_number="1.3.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonobetainyl-CoA dehydrogenase"
                     /protein_id="HDV2198614.1"
                     /translation="MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVK
                     ALADMGIDSLLLPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGT
                     QEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSA
                     YTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELD
                     EKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRF
                     QLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQ
                     VLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR"
     gene            2906..4123
                     /gene="caiB"
                     /locus_tag="RHX79_003485"
     CDS             2906..4123
                     /gene="caiB"
                     /locus_tag="RHX79_003485"
                     /EC_number="2.8.3.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-carnitine CoA-transferase"
                     /protein_id="HDV2198615.1"
                     /translation="MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIE
                     NVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFA
                     RRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP
                     MPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNG
                     GEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPE
                     GTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQY
                     VARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDI
                     QELVSKGLAKVED"
     gene            4197..5750
                     /gene="caiC"
                     /locus_tag="RHX79_003486"
     CDS             4197..5750
                     /gene="caiC"
                     /locus_tag="RHX79_003486"
                     /EC_number="6.2.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308067.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonobetaine/carnitine-CoA ligase"
                     /protein_id="HDV2198616.1"
                     /translation="MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELN
                     QEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESA
                     WILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQ
                     PATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYL
                     TVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTL
                     MVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPG
                     DKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAK
                     VLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIV
                     VVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCS
                     GKIIRKNLK"
     gene            5859..6644
                     /gene="caiD"
                     /locus_tag="RHX79_003487"
     CDS             5859..6644
                     /gene="caiD"
                     /locus_tag="RHX79_003487"
                     /EC_number="4.2.1.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414578.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonobetainyl-CoA hydratase"
                     /protein_id="HDV2198617.1"
                     /translation="MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDD
                     PQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVN
                     GYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVM
                     TGRRMGTEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMP
                     VEEAYRYIRSGVLKHYPSVLHSEDAVEGPLAFAEKRDPVWKGR"
     gene            6650..7240
                     /gene="caiE"
                     /locus_tag="RHX79_003488"
     CDS             6650..7240
                     /gene="caiE"
                     /locus_tag="RHX79_003488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308065.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine operon protein CaiE"
                     /protein_id="HDV2198618.1"
                     /translation="MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLR
                     GDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSV
                     IMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQ
                     DLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR"
     gene            complement(7326..7721)
                     /gene="caiF"
                     /locus_tag="RHX79_003489"
     CDS             complement(7326..7721)
                     /gene="caiF"
                     /locus_tag="RHX79_003489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414576.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine metabolism transcriptional regulator
                     CaiF"
                     /protein_id="HDV2198619.1"
                     /translation="MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNT
                     LTYILSEVAEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVR
                     KTPRIPAVPLTELNREQKWQMMLSKSMRR"
     gene            complement(7982..11203)
                     /gene="carB"
                     /locus_tag="RHX79_003490"
     CDS             complement(7982..11203)
                     /gene="carB"
                     /locus_tag="RHX79_003490"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDV2198620.1"
                     /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV
                     ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL
                     ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA
                     DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM
                     EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG
                     VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ
                     ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVD
                     GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGV
                     REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG
                     GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE
                     DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV
                     ERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT
                     AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA
                     YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA
                     TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST
                     GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD
                     ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR
                     RSALQYKVHYDTTLNGGFATAMALNADATEKVVSVQEMHAQIK"
     gene            complement(11221..12369)
                     /gene="carA"
                     /locus_tag="RHX79_003491"
     CDS             complement(11221..12369)
                     /gene="carA"
                     /locus_tag="RHX79_003491"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDV2198621.1"
                     /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT
                     DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL
                     KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK
                     EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI
                     VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA
                     LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD
                     GTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK"
BASE COUNT         3008 a         3297 c         3360 g         3068 t
ORIGIN      
        1 gaggttaata ataattatat taaatgttaa caaaaataaa acaaacggga acgcaaaata
       61 aatattcgtt ttcacagtgg aattaactca tgaagaatga aaagagaaaa acgggaatag
      121 aaccgaaggt tttctttccg ccgttaataa tcgtcggcat actttgttgg cttacagtca
      181 gagatctgga tgcagcgaat gtcgttatta atgctgtatt cagttacgtc accaatgtat
      241 ggggatgggc atttgaatgg tatatggtgg tgatgctttt cggttggttc tggctggtgt
      301 ttggcccgta tgccaaaaag cgtttaggta acgaaccacc tgaatttagt accgccagtt
      361 ggatctttat gatgttcgcc tcctgtacgt ctgctgccgt actgttctgg ggatcgattg
      421 agatctacta ctacatctcc accccgccgt ttggcttaga accgaactcg acaggggcga
      481 aagagttggg gctggcttac agcttgttcc actggggacc tctgccgtgg gccacttaca
      541 gcttcctttc agtcgccttc gcttacttct tctttgtccg caaaatggaa gtgattcgcc
      601 ccagctcgac actggtgccg ctggtaggtg aaaaacacgc caaagggttg ttcggcacta
      661 tcgtcgacaa cttctatctc gtcgccttga tcttcgcgat gggtaccagt ctgggccttg
      721 ccacgccgct ggtgaccgag tgtatgcaat ggttgtttgg cattccgcat accctgcaac
      781 tggacgctat catcattacc tgctggatta tcctcaacgc catttgcgtc gcttgcggtc
      841 tgcaaaaagg ggtacgtatc gccagtgacg tgcgtagtta cctgagcttc ctgatgctgg
      901 gttgggtgtt cattgtcagc ggtgccagct tcatcatgaa ctacttcacc gattcggtgg
      961 ggatgttgct gatgtatctg ccgcgcatgt tgttctatac cgatcccatc gctaaaggcg
     1021 gcttcccgca gggctggacc gtgttctact gggcatggtg ggtgatttat gctatccaga
     1081 tgagtatctt cctcgcccgc atctcccgtg gtcgtactgt gcgtgaactg tgcttcggca
     1141 tggtgctggg gctgacagcg tcaacctgga tcctgtggac tgtactcggt agtaacactc
     1201 tgctgttgat agataaaaac atcatcaaca ttccaaatct gatcgaacag tacggtgtgg
     1261 cgcgcgccat catcgaaacc tgggccgctc tgccactcag caccgccacc atatggggct
     1321 tcttcatcct ctgctttatt gccaccgtta cgctggttaa cgcctgctct tataccctgg
     1381 cgatgtccac ttgccgcgaa gtacgcgatg gtgaagaacc acctctgctg gtgcgtatcg
     1441 gttggtcaat tctggttggc attatcggta ttgttctgct ggcgctcggc ggcctgaaac
     1501 cgattcaaac cgccattatc gccggaggat gcccgctgtt cttcgtcaac attatggtga
     1561 cgctctcctt tattaaagac gcgaaacaga actggaaaga ttaattaacc cccaaaatat
     1621 caagaggttg aaagatggat tttaatttaa atgatgagca ggaactgttt gtcgccggta
     1681 tccgcgaact gatggccagc gaaaactggg aggcctattt tgccgagtgc gaccgtgaca
     1741 gcgtctaccc ggaacgtttt gtcaaagcac tggcggatat gggtatcgac agtctgctgc
     1801 tccctgaaga gcacggtggt ctggacgcgg ggtttgttac tctcgccgcc gtgtggatgg
     1861 agctgggacg tctgggggca ccaacctatg tgctgtacca gttgccgggc gggttcaaca
     1921 ccttcctgcg cgaaggcaca caagagcaga tcgacaaaat tatggctttc cgcggcaccg
     1981 gtaagcagat gtggaactca gcgattaccg aaccgggcgc gggctccgac gtgggtagcc
     2041 tgaaaacgac ttatacccgt agaaatggta agatttatct taatggtagt aagtgtttta
     2101 ttaccagcag cgcctatacc ccgtacatcg tggtgatggc gcgcgacggg gcttctccgg
     2161 acaaacctgt ctacaccgaa tggtttgttg atatgagcaa accgggcatc aaagtgacca
     2221 aacttgaaaa gctcggtctg cgtatggata gctgctgtga aatcaccttt gacgacgtgg
     2281 aactggacga gaaagacatg ttcggtcggg aaggtaacgg ctttaaccgc gtcaaagaag
     2341 agttcgacca tgaacgtttc ctggtagccc tcaccaacta cggtacggcg atgtgcgcct
     2401 ttgaagatgc ggcgcgctac gccaatcagc gcgtgcagtt tggcgaggct attggtcgtt
     2461 tccagttgat tcaggaaaaa ttcgcccaca tggcgatcaa attaaactcc atgaaaaaca
     2521 tgctgtatga agcagcgtgg aaagcagaca acggcaccat cacctctggc gatgcagcga
     2581 tgtgcaaata cttctgcgcc aatgcggcat ttgaagtggt ggatagcgca atgcaggtgc
     2641 tgggcggtgt cgggattgcg ggcaaccacc gcatcagccg cttctggcgt gacctgcgtg
     2701 tagaccgcgt ctccggggga tctgacgaaa tgcagatcct gacgctgggt cgtgcggtgc
     2761 tgaagcaata ccgctaagtc aatgcgctgc ctgatgcgac gctgatgcgt cttatcaggc
     2821 ctacgggagc acgaatgtag gccggataaa gcgtttacgc cgcatccggc agtcatgcgc
     2881 tacataaatt tttcaggagc aaataatgga tcatctaccc atgccgaaat tcgggccgtt
     2941 ggccggattg cgcgttgtct tctccggtat cgaaatcgcc ggaccgtttg ccgggcaaat
     3001 gttcgcagaa tggggcgcgg aagttatctg gatcgagaac gtcgcctggg ccgacaccat
     3061 tcgcgttcaa ccgaactacc cgcaactctc ccgccgcaat ttgcacgcgc tgtcgttaaa
     3121 tattttcaaa gatgaaggcc gcgaagcgtt tctgaaatta atggaaacca ccgatatctt
     3181 catcgaagcc agtaaaggtc cggcctttgc ccgtcgtggc attaccgatg aagtactgtg
     3241 gcagcacaac ccgaaactgg ttatcgctca cctgtccggt tttggtcagt acggcaccga
     3301 ggagtacacc aatcttccgg cctataacac tatcgcccag gcctttagtg gttacctgat
     3361 tcagaacggt gatgttgacc agccaatgcc tgccttcccg tataccgccg attacttttc
     3421 tggcctgacc gccaccacgg cggcgctggc agcactgcat aaagtgcgtg aaaccggtaa
     3481 aggcgaaagt atcgacatcg ccatgtatga agtgatgctg cgtatgggcc agtacttcat
     3541 gatggattac ttcaacggcg gcgaaatgtg cccgcgcatg agcaaaggta aagatcccta
     3601 ctacgccggt tgcggtctgt ataaatgcgc cgacggctac atcgtgatgg aactggtggg
     3661 cattacccaa attgaagagt gctttaaaga tattggcctc gcacatctac tcggtacgcc
     3721 ggaaatcccg gaaggcactc agcttatcca ccgtatcgaa tgcccttacg gcccactggt
     3781 agaagaaaaa ctcgatgcct ggctggcggc acataccatc gcagaagtta aagaacgctt
     3841 tgccgaactg aatatcgcct gtgccaaagt actgaccgta ccggaactgg aaagcaatcc
     3901 acagtatgtt gcccgtgaat caatcactca gtggcaaacg atggatggtc gcacctgcaa
     3961 agggccgaac atcatgccga aattcaaaaa taaccccgga caaatctggc gcggaatgcc
     4021 ctcacatggc atggacacgg ctgccatttt gaaaaatatc ggctacagcg aaaacgacat
     4081 tcaggagttg gtcagcaaag gtctggccaa agttgaggac taaacgcgtg gcgtcagtcg
     4141 gcttgcctga ctagcgcccg cccaataaca aacgaacaaa aatggataga ggtgcaatgg
     4201 atatcattgg cggacaacat ctacgtcaaa tgtgggacga tcttgcggac gtttacggtc
     4261 ataaaacggc gctgatttgt gaatccagcg gcggagtcgt taaccggtat agttatcttg
     4321 agttaaatca ggagattaac cgcacggcaa acctgtttta tacgctgggg attcgcaaag
     4381 gcgacaaggt tgcactacat ctcgacaact gcccggaatt tatcttttgc tggttcgggc
     4441 tggcaaaaat tggcgcgatt atggtgccga ttaacgcccg cctgttacgc gaggaaagcg
     4501 cgtggatcct gcaaaatagc caggcgtgcc tgctggtgac cagtgcgcaa ttctatccta
     4561 tgtatcaaca gattcagcag gaagatgcca ctcaattgcg gcacatttgc ctgacagatg
     4621 tggcacttcc cgctgatgat ggcgtgagtt cgtttactca actgaaaaat caacaacctg
     4681 ccaccttgtg ctatgcaccg ccgctatcga ctgacgatac ggcggaaatt ctcttcacct
     4741 ccggcaccac ctcccgaccg aaaggtgtgg tgattaccca ttacaacctg cgcttcgctg
     4801 gatattactc cgcctggcag tgtgcactgc gtgacgatga cgtctacctg acggtaatgc
     4861 ctgcgtttca tatcgattgc cagtgtactg cggcgatggc ggcgttttct gccggggcca
     4921 cctttgtgct ggtcgagaaa tacagcgccc gcgccttctg gggacaggtg cagaagtacc
     4981 gcgccaccat taccgaatgt attccgatga tgatccgtac gttgatggtg cagccgcctt
     5041 cagcgaacga tcggcaacac cgcctgcggg aagtgatgtt ttatctcaac ttgtcggagc
     5101 aggaaaaaga tgcgttttgt gaacgcttcg gcgttcgctt gctgacgtct tatgggatga
     5161 cggaaaccat tgtgggcatt atcggcgatc gccctggcga taaacgacgc tggccgtcga
     5221 ttggtcgggc ggggttttgc tacgaagcgg agatccgcga cgatcacaat cgcccgctcc
     5281 cggcaggtga gatcggtgaa atctgtatta aaggcgtacc agggaaaacc atcttcaaag
     5341 agtattttct caacccgaaa gccactgcga aagtgctgga agccgacggc tggctacata
     5401 ccggcgatac cggatactgc gacgaagagg gcttttttta tttcgtcgat cgccgctgca
     5461 atatgatcaa acgcggtggc gagaatgtct cctgcgtgga gctggaaaat atcatcgcca
     5521 cccatccaaa aattcaggat atcgtggttg tgggtattaa agattcgatt cgcgatgaag
     5581 ccatcaaagc atttgtggtg ctgaatgaag gtgaaacatt gagcgaagag gaatttttcc
     5641 gcttctgcga acaaaatatg gcgaaattta aagtgccctc ttatctggag atcagaaaag
     5701 atctgccacg taattgctcg gggaaaataa ttagaaagaa tctgaaataa atgaaacagc
     5761 agggaactac cctgccagct aataatcacg ctataaaaca atatgcattt tttgcaggga
     5821 tgttgtcgtc cctgaaaaag caaaaatgga gaaaaggaat gagtgaatca ttacatctga
     5881 cccgcaatgg atcaattctg gaaattaccc ttgatcgtcc aaaagcgaat gctattgatg
     5941 caaaaaccag ctttgaaatg ggcgaagtat ttctaaattt ccgtgacgat ccgcaattac
     6001 gtgtcgccat tattaccggt gccggagaga agttcttttc cgcgggctgg gatttaaaag
     6061 cggcagcaga aggcgaagca ccggatgctg actttggccc gggtggattt gcgggattaa
     6121 ccgaaatttt caatctcgac aaaccggtta tcgcagctgt gaacggctat gcctttggcg
     6181 gcggctttga actggcgctg gcggcagatt ttattgtttg tgccgataat gccagcttcg
     6241 ccctgccgga agccaaactg ggcatcgttc ctgacagcgg cggcgtgctg cgtctgccga
     6301 agatcctgcc gcctgccatc gtcaatgaaa tggtgatgac cggcagacga atgggcacag
     6361 aagaggcgct gcgttggggg atagtcaacc gcgtggttag ccaggcggaa ctgatggata
     6421 acgcccgcga actggcgcag cagctggtta acagcgcccc gctggcgatt gcggcgctga
     6481 aagagatcta ccgcaccacc agcgaaatgc cggtagaaga agcgtatcgc tatattcgca
     6541 gcggcgtgtt gaaacactat ccgtcggttc tgcattcgga agatgccgtt gaagggccgc
     6601 tggcgtttgc cgagaagcgc gatccggtat ggaaaggacg ttaacaaccg tgagctatta
     6661 cgcctttgag gggttaattc cggtggttca cccgacggcg tttgtccatc ccagtgccgt
     6721 cttgattggc gatgtgattg tgggagccgg tgtctacatc ggcccactcg cctcactgcg
     6781 tggtgactac gggcggttga tcgtgcaagc gggagccaat attcaggatg gctgcattat
     6841 gcatggctac tgcgacactg acaccatcgt tggggaaaac ggccatatcg ggcacggagc
     6901 gatcctgcat ggttgtgtga ttggtcgcga tgcattggtc gggatgaaca gcgtgattat
     6961 ggatggcgcg gtcattggcg aagagagcat tgttgccgcc atgagctttg tcaaagcagg
     7021 ctttcacggc gagaaacgcc agttgttgat gggtacgcca gcccgcgctg tacgcagtgt
     7081 tagtgacgac gagttacact ggaaacggtt gaataccaaa gagtatcagg atcttgtcgg
     7141 gcgctgtcat gcatcgttac atgaaacaca gccactgagg caaatggagg aaaatcgccc
     7201 ccgtttgcag gggacgacgg atgtgacgcc taaacggtga tcttgccgga tgcgacctgg
     7261 ttgctggata agatgctaca acatcgcatc tggcaagcag gacgcccggt atcaacgaga
     7321 taaaattaac gacgcatact ctttgacaac atcatctgcc acttctgctc gcggttaagt
     7381 tccgtgagcg gaacggcagg aatacgtggc gtctttctta cgccgactaa tttatcccgg
     7441 ctgttattgc gcaggcgcgc gtaaatttgc tcatcgatat cgaccacttt taccagtcgc
     7501 tggcactggc atccccgtcc ttccagctta ttagggatca tcttaacttc gcagcttatt
     7561 tctgcgactt ccgacagaat ataagtcagg gtattaaccg ccttgctgtg ttcaatatcg
     7621 aaatgaatag agatctctct tgctatcacc caccgatttt cagccatcat ccattcggcg
     7681 attaacaagt agagtggttt ttcaacatat ccttcacaca tacgaactcc agtttcacaa
     7741 attaaaagtc tggctatgac tcgttttgaa gcaattaaac aaggccatat taaaattgtg
     7801 gatatatcga tagtatgcaa cttcaccgtc gataagtgtg agctaaatcc tgcttatgtc
     7861 atcaaaaata tcgattcccc aaaagattta cttaatgggc aaaaaaaacg gtcctcatca
     7921 gagaaccgta ttacttattc gatcaaatta gcggatgaaa aatatccgcc atgacacgct
     7981 attatttgat ctgcgcgtgc atttcctgca ccgaaactac tttttcggtc gcgtcggcat
     8041 tcagcgccat cgcggtagcg aaaccaccgt tcagggtggt gtcataatgc actttatatt
     8101 gcagcgcact gcgacggatc acgcgggagt cttcaatcgc gcgacggcct gaagtggtgt
     8161 tgatgatgta ggtatattcg ccattcttga tgcggtcctg aatgtgcgga cggccttcat
     8221 gcaccttgtt caccagacgc ggattaatgc ccgcttcgcc cagcacaatc gccgtgccgt
     8281 gggtcgcatc cagctcgaag ccctgtttca gcagttttgc cgccaggtcc accacgcgtt
     8341 ctttatcgcc ttcgcgcacg gaaagcaacg cacgaccgtg tttcttcatg gtggagttgc
     8401 tgcccagctg cgctttggca aacgcttcag cgaaggtgcg gcccacgccc atcacttccc
     8461 cagtggagcg catttctggc cctaacagcg ggtcaacacc cgggaattta ttgaacggca
     8521 gcaccacttc tttcaccgag tagtacggcg ggataacttc tttggttacg ccctgctcag
     8581 ccagcgattt gccagccatc acacgcgccg ccacttttgc cagcggtacg ccggtggctt
     8641 tggagacgaa cggaacggta cgcgccgcac gcgggttaac ttcaatcagg tagacttcgt
     8701 tgtttttcac cgcaaactgc acgttcatca gaccgcgcac ctgcaattcg aaggccagtt
     8761 tctgcacctg ctggcgcatc acatcctgaa tttcctgact taaggtgtag gctggcagag
     8821 aacatgcgga gtcaccggag tgcacgcccg cctgctcgat gtgctccatg atgccgccaa
     8881 tcagcaccat ttcgccgtcg cagatggcat ccacgtcaac ttctaccgcg tcatcaagga
     8941 agtgatccag caacactggc gcatcgttag acacgctgac cgccgtctgg aagtagcgac
     9001 gcaggtcagc ttcgtcatag acgatttcca tcgcccgacc gccgagaacg taagacggac
     9061 gtaccaccag cgggtagcca atctctttcg ccttctctac cgccatttca atagcggtaa
     9121 cggtggcgtt cgccggttgt ttcagtttca gacgctcaac cgcatgctgg aagcgttcac
     9181 ggtcttctgc acggtcgata gcatccgggc tggtgccgat aaccggtacg ccagcagctt
     9241 ccagcgcgcg cgccagtttc agcggggtct gaccgccgta ctgaacgata acgcctttcg
     9301 gcttctcaat acgcacgatt tctagcacat cttccagagt taccggctcg aagtagaggc
     9361 gatcggaagt gtcgtagtcg gtggagacgg tttccgggtt acagttaacc ataatggttt
     9421 cgtaaccgtc ttcgcgcagc gccagcgagg cgtgtacaca gcagtagtcg aattcgatac
     9481 cctgaccgat acggttcggg ccgccgccga gaaccatgat tttttcacgg tcggtagacg
     9541 gattcgcttc gcactcttct tcataagtgg agtacatgta agcggtgtcg gtggcgaact
     9601 ctgccgcaca ggtatccacg cgcttataaa ccgggtgcag gtcatactgg tcgcgcagct
     9661 tgcggatttc cgcttcgcgc acgcccgcca gttttgccag acgcgcatcg gcaaagcctt
     9721 tgcgtttcag ctggcgcagg aattcagcgt tcaggccagt gatgcccact tccgctactt
     9781 tctcttccag acgcaccagt tcttcaatct gtaccaggaa ccagcggtca atattggtca
     9841 ggttgaacac gccgtccaca gacaggcccg cacggaaggc atcggcgatg taccagatac
     9901 gctctgcgcc agcatctttc agttcgcgac ggattttggt taacgcttcc gggtcatcga
     9961 ggctcacttt cgggtcgaat ccagtcgcac cgacttccag gccgcgcagc gctttttgca
    10021 gggattcctg ctgcgtgcga ccaatcgcca tcacttcgcc aaccgatttc atctgagtgg
    10081 tcagacggtc gttagcacca gcgaattttt cgaagttgaa gcgaggaatt ttagtaacca
    10141 catagtcgat ggacggctcg aaggaggccg gagtacgtcc gccagtgatg tcgttcatca
    10201 gttcgtcgag ggtgtaaccc accgccagtt tcgccgccac tttagcaatc gggaaaccgg
    10261 tcgctttcga cgccagcgcc gaagaacggg acacgcgtgg gttcatttcg ataacaatca
    10321 ggcgaccgtt tttcgggttc accgcaaact ggacattgga accaccggtt tcaacgccga
    10381 tttcacgcag caccgccatc gaggcgttac gcatgatttg atattctttg tcggtcagcg
    10441 tttgggctgg cgcgacagtg atggagtcac cggtatggat gcccatcgca tcaaagtttt
    10501 cgatagagca gacgatgatg cagttgtcgt ttttatcacg caccacttcc atctcgtact
    10561 ctttccagcc gatcagcgac tcatcaatca gcagctcttt ggttggggag agatccagac
    10621 cgcgggcgca aatttcttca aactcttcgc ggttataagc gataccgccg ccgctaccgc
    10681 ccatggtaaa ggatgggcga ataatgcacg ggaagcccac gtcagcggca accgccagcg
    10741 cttcttccat cgtgtgtgcg ataccggaac gcgcggtttc cagaccaatt ttcttcatcg
    10801 ctacgtcgaa acgacggcgg tcttctgctt tatcaatcgc atcggcggtc gcaccaatca
    10861 tagtcacgcc gaactcttcc aacacgccct gacgctccag ctccagcgcg cagttcagcg
    10921 ccgtctgacc gcccatcgtt ggcagcaccg cgtccgggcg ctctttttca ataatcttgc
    10981 gtactacttc ccagtgaatc ggctcgatgt aggtcgcatc ggccatttcc gggtcggtca
    11041 tgatggtcgc cgggttggag ttcaccagaa tgacgcggta accctcttcg cgcagggctt
    11101 tacatgcttg cgcgccagag tagtcaaact cacacgcctg accgataaca atcgggcccg
    11161 cacccagaat caggatactt tttatatctg tacgttttgg catggctctt ttactcctga
    11221 ttacttagcg gttttacggt actgctcaat taactcgata aagtggtcga acaacggcgc
    11281 tgcgtcgtgt ggcccagggc tggcttccgg gtgaccctgg aagctgaacg ccggtttatc
    11341 agtgcgatga atgccctgta acgtaccgtc gaacagggat ttatgcgtga cacgcaggtt
    11401 tgcaggtaat gttgcttcat ccaccgcaaa accgtggttc tgggcggtga tcatcaccac
    11461 gtttttctcc acatctttaa ccggatggtt gccgccgtgg tgaccaaatt tcattttgac
    11521 agtcttcgca ccgctcgcca gcgccagcag ctgatgaccg aggcagatgc cgaataccgg
    11581 aatatcggtt tcgaggaatt tctggatggc ggtaatggcg taatcgcacg gggccgggtc
    11641 gccaggaccg ttggagagga agatgccgtc tggattcatt ttcagcacat cttccgcaga
    11701 agtttgcgcc ggaacgatgg tcaggcgaca gcctctatcc accagcatcc gcaggatgtt
    11761 gcgcttggca ccaaaatcat aagccacgac gtggaacggc agctcgtctt cttttttcgc
    11821 ttctggcagg ccgccggtca acgtccagct cccttgtgtc cagctatagg cttctgcggt
    11881 ggtcacttct tttgccagat ccatgccatt cagacctggg aacgcgcggg ctttttctaa
    11941 cgccaacgcc gcatccgggt tatcgcctgc gataatgcag ccattctgtg cgcctttctc
    12001 gcgcagtaaa cgcgtcagct tacgggtatc gatatcggca atcgccacga tgttatggcg
    12061 cttcaggtaa gaagagaggt cttcggtatt acggaagttg ctggcaatca gcggcaggtc
    12121 gcgaatcacc agaccttgtg catggacctg agaagattct tcatcggcgt cattagtgcc
    12181 gacattgcca atatggggat aagtaagagt aacgatttga cgagaatagg aaggatcagt
    12241 gaggatttct tgataaccgg tcattgaagt attgaaaacg acttccccaa ccgccgaacc
    12301 tgttgcccct atggcccgac cgtgaaactg ggttccgtct tccagaacca atagcgctga
    12361 cttaatcaaa acaccctcca gagaatattc actcacttta tttgcatatt aattcacaat
    12421 gatgacgtaa atcaatgcaa atctgcttac cgacgaattt ctggcaaacg gcggcattct
    12481 ggagatatgg gcgctaaaag tcaacttaat ggcggtattt tttatattat tttgtggctc
    12541 atgcatgttt tacaggcatt aagcgacaaa aagatcatat aacctgttct ggaaaacgct
    12601 tgcgcagcaa gaagattgca tgaaataaaa acgagcagga aaaagtggac caaatggtca
    12661 aaatttacat taaaacaaca aaaacagaag acaaaacatg taatttttgg cacttataga
    12721 atatttaaaa aca
//
LOCUS       DAPGWB010000128        12589 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.130, whole genome shotgun sequence.
ACCESSION   DAPGWB010000128 DAPGWB010000000
VERSION     DAPGWB010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12589
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.130"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            135..1004
                     /gene="robA"
                     /locus_tag="RHX79_003492"
     CDS             135..1004
                     /gene="robA"
                     /locus_tag="RHX79_003492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     RobA"
                     /protein_id="HDV2198622.1"
                     /translation="MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKD
                     VTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPAL
                     YRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMR
                     YQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVM
                     LQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRP
                     INLRCELLIPIRR"
     gene            complement(1001..1648)
                     /gene="gpmB"
                     /locus_tag="RHX79_003493"
     CDS             complement(1001..1648)
                     /gene="gpmB"
                     /locus_tag="RHX79_003493"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase GpmB"
                     /protein_id="HDV2198623.1"
                     /translation="MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAK
                     ELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEEN
                     WRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVST
                     ILGLPAWAERRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR"
     gene            1700..2221
                     /gene="yjjX"
                     /locus_tag="RHX79_003494"
     CDS             1700..2221
                     /gene="yjjX"
                     /locus_tag="RHX79_003494"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/xanthosine triphosphatase"
                     /protein_id="HDV2198624.1"
                     /translation="MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQ
                     PFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENTSQRGEARSA
                     TLPLPAVILQKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAWKLTRASVYHQAVIL
                     ALSPFHNAVYQAL"
     gene            complement(2306..2632)
                     /gene="trpR"
                     /locus_tag="RHX79_003495"
     CDS             complement(2306..2632)
                     /gene="trpR"
                     /locus_tag="RHX79_003495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HDV2198625.1"
                     /translation="MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLT
                     PDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEE
                     VLLKSD"
     gene            complement(2722..4659)
                     /gene="sltY"
                     /locus_tag="RHX79_003496"
     CDS             complement(2722..4659)
                     /gene="sltY"
                     /locus_tag="RHX79_003496"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase"
                     /protein_id="HDV2198626.1"
                     /translation="MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAW
                     DNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQ
                     SRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGK
                     SQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAI
                     ISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNED
                     QIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTW
                     LARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYE
                     LKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLARYA
                     FNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAW
                     NPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQ
                     QFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAY
                     YRYFMGDKPTLMSATEWGRRY"
     gene            4870..6537
                     /gene="ettA"
                     /locus_tag="RHX79_003497"
     CDS             4870..6537
                     /gene="ettA"
                     /locus_tag="RHX79_003497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017145039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HDV2198627.1"
                     /translation="MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAG
                     KSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALK
                     RLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKI
                     ANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHD
                     RYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWV
                     RQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYG
                     DRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVD
                     QFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGER
                     GRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIA
                     THILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK"
     gene            complement(6844..8076)
                     /gene="nadR"
                     /locus_tag="RHX79_003498"
     CDS             complement(6844..8076)
                     /gene="nadR"
                     /locus_tag="RHX79_003498"
                     /EC_number="2.7.1.22"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional transcriptional
                     regulator/nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide kinase NadR"
                     /protein_id="HDV2198628.1"
                     /translation="MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPS
                     AQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDD
                     TRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNG
                     IKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIDTVLVDPKRTFMSISGAQIRENPFRY
                     WEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDE
                     IALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALI
                     DEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEDDYD
                     SRFLRCVELVREMMGEQR"
     gene            complement(8097..9479)
                     /gene="radA"
                     /locus_tag="RHX79_003499"
     CDS             complement(8097..9479)
                     /gene="radA"
                     /locus_tag="RHX79_003499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001399683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDV2198629.1"
                     /translation="MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPT
                     VARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGG
                     NPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIE
                     QICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMV
                     GHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQG
                     LREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLE
                     QNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQ
                     DLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKL
                     SDALSVFDDL"
     gene            complement(9528..10496)
                     /gene="serB"
                     /locus_tag="RHX79_003500"
     CDS             complement(9528..10496)
                     /gene="serB"
                     /locus_tag="RHX79_003500"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase"
                     /protein_id="HDV2198630.1"
                     /translation="MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYG
                     RGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLG
                     KIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRS
                     RVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKL
                     RLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGAND
                     LPMIKAAGLGIAYHAKPKVNEKAEVTIRHADLMGVFCILSGSLNQK"
     gene            10602..11246
                     /locus_tag="RHX79_003501"
     CDS             10602..11246
                     /locus_tag="RHX79_003501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HDV2198631.1"
                     /translation="MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQ
                     LEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIAR
                     SGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN
                     TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE"
     gene            11274..12290
                     /gene="lplA"
                     /locus_tag="RHX79_003502"
     CDS             11274..12290
                     /gene="lplA"
                     /locus_tag="RHX79_003502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase LplA"
                     /protein_id="HDV2198632.1"
                     /translation="MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTV
                     VIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTIST
                     SIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLS
                     RLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEA
                     EIISPDKTPDLPNFAEIFARQSSWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHI
                     TRAQVFTDSLNPAPLEALAGRLQGGLYRADMLQQECEALLVDFPDQEKELRELSTWIA
                     GAVR"
     gene            12322..12471
                     /locus_tag="RHX79_003503"
     CDS             12322..12471
                     /locus_tag="RHX79_003503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000566138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198633.1"
                     /translation="MIDLENQEREIINIMLSQRISWLAAVRIRHKLSLAEVSKMLGIS
                     INSLK"
BASE COUNT         2909 a         3525 c         3258 g         2897 t
ORIGIN      
        1 caatactttt atttccgtca agccctaaaa catactctac taagaaaaaa acactgaatg
       61 ctaaaacagc aaaaaatgct attatccaat tacctgatgt caggtgctcg ttgttgaaag
      121 gatgaggata ttttatggat caggccggca ttattcgcga ccttttaatc tggctggaag
      181 gtcatctgga tcagcccctg tcgctcgaca atgtagcggc gaaagcaggt tattccaagt
      241 ggcacttaca gagaatgttt aaagatgtca ctggccatgc tattggcgcg tatattcgtg
      301 ctcgtcgttt gtcgaaatcg gcggtcgcac tacgcctgac tgcgcgtccg attctggaca
      361 tcgcgctgca ataccgcttc gactctcaac agacatttac ccgcgcattc aagaagcagt
      421 ttgcccagac tcctgcactt taccgccgtt ctcctgaatg gagcgccttt ggtattcgcc
      481 cgccactacg tctgggtgaa ttcacaatgc cagagcacaa atttgtcacc ctggaagata
      541 cgccgctgat tggtgttacc cagagctact cctgttcgct ggagcaaatc tctgatttcc
      601 gccatgaaat gcgttatcag ttctggcacg attttctcgg caacgcgccg accattccgc
      661 cagtgctcta cggcctgaat gaaacgcgtc cgagtcagga taaagacgac gaacaagagg
      721 tattctatac cactgcgtta gcccaggatc aggcagatgg ctatgtactg acggggcatc
      781 cggtgatgct gcagggcggc gaatatgtga tgtttaccta tgaaggtctg ggaaccggcg
      841 tgcaggagtt tatcctgaca gtatacggaa cgtgcatgcc aatgctcaat ctgacgcgcc
      901 gtaaaggtca ggatattgag cgatactacc cggcagaaga tgccaaagcg ggagatcgcc
      961 caattaatct gcgctgtgaa ctgctgattc cgatccgtcg ttaacgctgc aactcatcta
     1021 atgcaggggc gtccagatgt gagatgtccc ctgcggtttc aacaacccag ccagacgcca
     1081 gccacaggct ttcctgataa tccacgcgcg aaatagaaca gttacgcaga cgtaagcggc
     1141 gctctgccca tgctggtaat ccgagaatcg tactcaccag acatcccagt gcaataccat
     1201 ggctcaccag cagcggtcgg cttccctgcg gtaagtcccg gcaagattcc agtgccgcat
     1261 tgacgcgatc gctgagctcc tgcattgact cgccttcagg aatacgcccg tcaacggtgc
     1321 cattgaccag ctgccgacgc cagttctctt cttcttcggt cagagaatcg atatgtcttt
     1381 tttccagcac acccatgttt aattcacgca ggcgagaatc aaagatgatg tcacagccgc
     1441 aggcctgggc gatgatttcc gccgtacgcc gggtgcgtcc taaatcgcta ctgataatat
     1501 gcgtaatgcc aagctctttg gcacgggttg ccacctgcat cgcctgttgc tcacctttgg
     1561 cggtcagcgg gctgtcagac tggccctgaa tacgtcgctc ggcgttccac tgcgtttcac
     1621 cgtggcggac taggtatacc tgtaacatgc tttttttccg tatactgctg taacgttaat
     1681 tttctgagta atgctgatta tgcaccaagt tgtctgtgcg accaccaatc ccgctaaaat
     1741 tcaggccatt ctgcaggcat ttcacgagat cttcggcgaa ggatcctgcc atattgcatc
     1801 cgttgccgtc gagagcggtg taccggaaca gccctttggc agtgaggaaa cgcgcgctgg
     1861 cgcacgaaat cgggtagcaa atgcccgccg tttacttcca gaggctgatt tttgggtggc
     1921 gattgaagct ggcatcgatg gtgacagcac tttcagttgg gtggtgattg aaaacaccag
     1981 ccagcgcggc gaggcgcgtt cggctacttt gccgttacct gcggtgattc tgcagaaagt
     2041 gcgtgaaggt gaggcgcttg gtcccgtaat gtcgcgttat accggtattg atgagattgg
     2101 tcgtaaggaa ggggcgatcg gcgtgtttac cgcctggaaa ctcactcgcg ccagcgtcta
     2161 tcaccaggcg gtgatcctgg cgctgagtcc gtttcacaat gccgtgtatc aggcattgta
     2221 ggacggataa ggcgttcacg ccgcatccgg cattcggtgc acgatgcctg atgcgacgct
     2281 gccgcgtctt atcaggccta caaaatcaat cgcttttcag caacacctct tccagccact
     2341 ggcgcagctc cacgggcgcg gctttcaggc tgttagatcc acgcgtaatc gtcgcgatgc
     2401 ccgcgccgag ttcatttttt aactcacgct ggctcatttc gccgcgcaac agctcttcga
     2461 caatacgcac gcgagtcccc aacgcttcgc gctcatctgg cgtcagcatc agatttaaca
     2521 acggtaaatg gagatcgttt tggtaggcat tcttaagcag gtcgacaaaa cgtaaccact
     2581 cctggtgacg ctgttctgcc atcgctgctg aatagggtga ttgttgggcc ataatatgtc
     2641 gccattgtta gcgggggaag caaaatgcct cccccggttg tactcgctaa agagtacgat
     2701 agcatatcat aaacgtgcgg atcagtaacg acgtccccat tccgtggcgc tcatcaacgt
     2761 cggtttatcc cccatgaaat agcggtagta agcgtcataa gccagcacgt tcttcacata
     2821 accgcgcgtc tcggagaacg gaatactctc gacaaatgcc acagcgtcga tacgcccggc
     2881 gctgttgcca agccaggttc gcacccgccc tggtccggcg ttataagctg ctgaggagaa
     2941 aatacggtta ttgccaaact gctgataaac atattgcaga taactggtgc caatgttgat
     3001 attcgtttcc ggatccagca attgcccagg gctactataa ccgggaatag agaacatctt
     3061 caccgtatgg gtcgctgtac caggcataat ctgcatcagg ccgctggccc ctaccggtga
     3121 tttcactttt ggattccagg cgctctcctg acgggcaatc gccatcgcat agctttgcgg
     3181 gatctcctta ccgctggtgt agcgtttgaa aagatcgttg taagccagcg ggaatcgctc
     3241 ttccagatga tcccatagct tcccggcgat cgttgcctga acgctaagat cccaccattg
     3301 gttgttgaaa gcataccgcg ccagttgagc ctgctctgtt tttgacttgc tcttcaccag
     3361 attggcccac tcgctacgcg cggtgttatc gagattccag tacatcaact cgcgcacgcg
     3421 cgccatctcc ggcccctgag tcagggcgct gtcaacattc tgcggcgctt tatcaatctt
     3481 cagctcatac tcttctccga tgcgttgtgc tgcaaccatc gggtagaaac cacgctgttg
     3541 catgagttga tgcaaaatct ctttcgcttc agcttcacgt ccgcgttcca gcaataaatc
     3601 cgcctgccag taacgccatt catctttctc ttttgcttcc atcggcagac gcgccagcca
     3661 ggtattcagg ccgcgacgat cgccggtgcc aagtgccatt cgcacacggc gttcaatcaa
     3721 cgacgtggat tgcgagcgca taatggcgtc atcgcgccat ttcgcctgct cgtcggtgac
     3781 atcgttgccc atcaaacgcc aggcgacgat atcgcgcagc tcctgaatct gatcttcatt
     3841 aagctgctgc gcctgggcaa gcgacgggat catcagccgt gcattttcag catcctgccg
     3901 cgccacactg gcaaacgcca ccgctgccat ttgacgggta aaatcggtcg ctccggttgt
     3961 acgcgcgaag gtcagtaccg tattagggtt gttcgccagt gaaatgattg ccgaggcgat
     4021 agtctggtaa tcggcaggca tctgccctgc cagcactgtt accaggccag tgttacccgc
     4081 tttcatcgcc agacggatac gctctaaata cgccagcgga tcttgtttac ctgacgcacg
     4141 ccagacgcta aataacttgt cacaggcatt aggctggctc ttgccggtta gccacagctc
     4201 tttcgcccct tgccaggctt cttcactctg cccggtgttc catttcgcat agtagtaatt
     4261 acattgcgct tcggtagttc cgggcttttc cgggctaaag gctaacaagc cacgccagtc
     4321 ttcacgccgc gccagttcat tgacgaaacg agattgcagc gtgcgagcgg gaggaagcgt
     4381 ggggttagcg cgaacaaagt tagtgaccgt caccgccggt tgattcatca gatcatcggt
     4441 gatctggcgg tattccaggt agggataaag cggataatcc ttcagtccag gcatcatttg
     4501 ttcgaccaca tccatttgtc gattatccca ggcctgcttg atttgcgcgt aacggctacg
     4561 ctgctcatcc agtgagtcgg ctcgcgccac gctgctgacc gtcagcagac agacaccggc
     4621 agccaacagc cgccaggtaa cttgtttggc tttttccaca agcgcatcct ctaagtgtaa
     4681 atacatcaat gcagcgtcat gccgcgtaat agatttatgc taaccagtca ttgccgttta
     4741 cgccacgtta cggacacttt tttactttta ctgcgaaggt gatcgaccaa ctgggattag
     4801 gcggggaaaa aggctacact tcgcctttga aaactcatca tcacgataaa catagaggcg
     4861 aagtccaacg tggctcaatt cgtttatacc atgcatcgtg tcggcaaagt tgttccgccg
     4921 aaacgtcata ttttgaaaaa catctctctg agtttcttcc ctggggcaaa aattggtgtc
     4981 ctgggtctga acggcgcggg taagtctacc ctgctgcgca ttatggcggg cattgataaa
     5041 gacatcgaag gtgaagcgcg tccgcagcca gacatcaaga ttggttacct gccgcaggaa
     5101 ccgcagctga acccggaaca caccgtgcgt gagtccattg aagaagcggt ttctgaagtg
     5161 gttaacgccc tgaaacgcct ggatgaagtg tatgcgctgt acgccgatcc ggatgccgat
     5221 tttgacaagc tggccgctga acaaggccgt ctggaagaga tcattcaggc tcacgacggt
     5281 cataacctga acgtacagct ggagcgtgcg gcggatgcgc tgcgtctgcc agattgggac
     5341 gcgaaaatcg ctaacctctc cggtggtgag cgtcgtcgcg tggcgttgtg ccgcctgctt
     5401 ctggaaaaac cagacatgct gctgctcgac gaaccgacca accacctgga tgccgaatcc
     5461 gtggcctggc tggaacgctt cctgcacgac ttcgaaggca ccgttgtggc gattactcac
     5521 gaccgttact tcctcgataa cgttgcaggc tggatcctcg aacttgaccg cggtgaaggt
     5581 attccgtggg aaggcaacta ctcctcctgg ctggagcaga aagatcagcg cctggcgcag
     5641 gaagcttcac aagaagcggc gcgtcgtaag tcgatcgaga aagagctgga gtgggtacgt
     5701 cagggaacta aaggccgcca gtcgaaaggt aaagcacgtc tggcacgctt tgaagagctg
     5761 aacagcaccg aatatcagaa acgtaacgaa accaacgaac tgtttattcc acctggaccg
     5821 cgtctgggcg ataaagtgct ggaagtcagc aacctgcgta aatcctacgg tgatcgcctg
     5881 ctgattgatg acctgagctt ctcgatcccg aaaggggcaa tcgtcgggat catcggtccg
     5941 aacggcgcgg gtaaatcgac cctgttccgt atgatctctg gtcaggaaca gccggacagc
     6001 ggcaccatca ctttaggtga aacggtgaaa ctggcatcgg ttgatcagtt ccgtgactca
     6061 atggataaca gcaaaaccgt ttgggaagaa gtttccggcg ggctggatat tatgaagatc
     6121 ggcaacaccg agatgccaag ccgcgcctac gttggccgct ttaactttaa aggggttgat
     6181 cagggtaaac gcgttggtga actttccggt ggtgagcgcg gtcgtctgca tctggcgaag
     6241 ctgctgcagg ttggcggcaa catgctgctg ctcgacgaac caaccaatga cctggatatc
     6301 gaaaccctgc gcgcgctgga aaacgccctg ctggagttcc cgggctgcgc gatggttatc
     6361 tcgcacgacc gttggttcct cgaccgtatc gccacgcaca ttctggatta ccaggatgaa
     6421 ggtaaagttg agttcttcga aggtaacttt accgagtacg aagagtacaa gaaacgcacg
     6481 ctgggcgcag acgcactgga gccgaagcgt atcaagtaca agcgtattgc gaagtaatgc
     6541 gtaaaatgcc ggatgcggcg tgaacgcctt atccggccta caaaccaaga aatttcaata
     6601 cgttgtgaat ctccaggcct gataagacgc ggtaagcgtc gcatcaggca ttgagcaccg
     6661 aatgccggat acggcgtgaa cgccttttcc ggcctacaac agccttagta tccgcaaatt
     6721 cgtagcgggt cacccgtgct gattctttta aaccttgttt aatctcgaca gcctcttcca
     6781 gagaggtttt caactcatca aaaaacttat tttatacctc gcctttgagc cgtttcatcg
     6841 cggttatctc tgctccccca tcatctcccg caccaactcc acgcagcgca ggaaacggct
     6901 gtcataatcg tcctcttcaa cccgcacgaa ttcgatattg ttctcttcca gcatctccac
     6961 cagcaagttc tggaactctt tgcgatccac cgaactgccg aggctgcgta aaccatccgc
     7021 cacccacggc gtgttgttct ccagcaggat caccagatcg aaacggtatt catcaatcaa
     7081 cgcctgtacg aacggatgct cacgcccttc gtactttttg cagaacgcct gggtagtgac
     7141 aaaatcagtg tcaataaacg ccactttatt ggcatatttc actgcaaaat caatgtattg
     7201 tgcgtggccc agcgcgattt tatcgtaatc ggaatactgc aatgcgatct catcaccgcc
     7261 gaggtgtgaa aagacataat cgcgaccata ttcccacgca ctggtggtat tgaagatatt
     7321 ggcaagtttg tttaccaggg tggatttacc gctcgactcg ccaccaagga tcgccacggt
     7381 acgtacaaag aacggcttca cttccgtagg aatatattcc cagtagcgga acggattttc
     7441 gcggatctgc gcaccgctga tactcataaa ggtacgtttc ggatcgacca gcaccgtatc
     7501 gatccccaga tgttccatat actgtggcgc atcggcttct tccgaggtgt agatcaggtc
     7561 cggctgaatc cccttttcag ccataaactt tttgatgccg ttgctccaca catcccagcc
     7621 gtgcggatac ggctccatgc cctcttcgtt gaaagcatga atgcgaatat ttttctgata
     7681 tttaaaagtt tgtaataacc agcgcagacg atccggcacc gtgggctgct gcgacatggc
     7741 gctgtcttca aacaacgcgc ggtcgcgggt atcgtcaaaa cccataatga tatgcagctc
     7801 gtcaacctgg ctacaggcgc gctggataag gtagatatgt ccggtatgca gcgggtagaa
     7861 cttaccgaat acgacaccaa tggttttctt ctgtcgggga aattcaagcc ccaaaaaacg
     7921 gtgcaacgcc tccagctttt gcgcgctggg gcttttaatt ttggcattca gtaactggct
     7981 taaataccct ttggtcatac cgctggcatc agctacctgc tgtagcgtgc agccctgttg
     8041 cttgatggca gttttcaggt aatcaaatga cgacatatct ccctccgtat ctctcattat
     8101 aagtcgtcga acacgctaag cgcgtcggag agttttttaa cgccaaaaat ctgcatccct
     8161 tccggcgctt ttttcggtac gttagccgcc ggaacaatcg cccggcgaaa accgtgtttc
     8221 gccgcttctg aaattcgttc ctgaccgctg ggcaccgggc ggatctcccc tgccagcccg
     8281 acttcaccaa acaccaccag atcctgtggc agcggtctgt cacgcaggct ggaaaccatc
     8341 gccagcagta acgctaaatc ggcactggtt tcggttacct tcacgccgcc gaccacgttc
     8401 acaaatacat cctgatcggc catttgcaga ccaccgtgac ggtgcaagac agccagcagg
     8461 attgccagac ggttttgttc cagccccact gccacgcggc gcggattcgc catcatcgag
     8521 tgatcgacca gcgcctgaat ctccaccagc aacggacgcg ttccttccca caccaccatc
     8581 acggagctgc cggaggtcac ttcatctccg cgacttaaga aaattgccga agggttgctg
     8641 acttcacgca gcccctgttc ggtcatcgcg aagacgccca gctcattcac cgcgccgaag
     8701 cggtttttat ggctgcgcaa ggtgcgaaaa cgggagtcgg catcaccatc cagaagcacc
     8761 gaacagtcga tacagtgttc cagcacttta gggccagcca gcgagccatc tttggttacg
     8821 tgcccaacca tgacaatcgc cacaccgcgc gttttggcga agcgcgtcag ataagccgcc
     8881 gtttcacgca cctgcgccac gctaccaggc gatgattgta catccgccat atgcatcacc
     8941 tggatcgagt caattaccat cagtttcggt tgctcttctt cggcaatcag gcagatctgt
     9001 tcgatgctgg tttccgacaa catattgaga ttgtcagtcg gcaggccaag gcgatgagcg
     9061 cgcattgcca cctgttgcag cgactcttcg ccagtgacat acagcgtttt catctgctgg
     9121 gccagtttgc acagcgtttg cagtagcagc gtggatttcc ccgcacctgg gttaccgcca
     9181 atcagaatgg cgcttcctgg caccacgccg ccgcctagta cgcggtcgaa ctctttaaat
     9241 ccggtggaaa aacgcggcag ctcttcaagg ctgatatcgg agagtttctg gacttttgcc
     9301 accccggcgc taccggcata gccgctgaga cgctcgttac gcgccaccgt tggcgacgca
     9361 gcaagacgca cctcggtgat ggtgttccag gcatgacagg cactgcactg cccctgccag
     9421 cgcggataat cggccccgca ttcattacaa acaaaggcgc gttttggagc ttttgccacg
     9481 gtgtacctcg ttaatgctgt gccgcccgca ggatggcggg cgagcaatta cttctgattc
     9541 aggctgccag agaggatgca gaataccccc atcaggtcag cgtgacggat ggtgacttcc
     9601 gccttttcat tcacttttgg cttggcatgg taggcaatcc ccagccctgc tgctttgatc
     9661 atcggcaggt cattagctcc atcgccaatc gccacggtct gcgccagcgg gatttcatac
     9721 tcctgcgcga ggcgagtcaa agttttcgct ttgtactgcg cgtctacgat gtcgccgatc
     9781 acattgccgg taaatttacc gtccatgatc tccagttcat tggctaccac ggcggtcagg
     9841 cgcagcttgt cgcgcagata ttcagcaaag aaagtaaagc cgccggaggc aatcgccact
     9901 ttccagccca gcgtttccag cttgagcacc agttgcgtta agcctggcat cagcggcaga
     9961 ttttcacgca cctgttgcag aatattggcg tcagcgcctt tcagcgtcgc cacacggctg
    10021 cgcaggctgg cggtaaaatc gagttcgccg cgcatcgccc gttcggttac ttccgccacc
    10081 atctcgcccg ttccggccag tttggcaatt tcatcaatac attcaatctg gatggcggtg
    10141 gaatccatgt ccatcaccag caaacccggc gtgcgcaggt gcgggatttt ccccagcggg
    10201 gcgacatcca gttgcgcttc atgggccagg cgcgtagccc gtgcggtgag tgaacctgcc
    10261 agacgaatca cctgataatc ttccacgcac caggcggcaa caatcaccat cgccgcaccc
    10321 agtttgctct ggtattgggt cagacgctgt ttatccagcc cacgaccata cagcagccag
    10381 ccgctacgac ctgcgtggta atccagtggc atcacttcat caccacttaa tgaaagaggc
    10441 agaccaggcc ataaagagac atcttcaggc aggtcgcacc aggtaatgtt aggcattaag
    10501 gctcctgtaa aatcgttcga agcagggaaa ataacgcatg aggctacctt gtatccattg
    10561 cttctggcaa cattaagtct caaattttca aagggtggaa gatggctcgc acaaaactga
    10621 aattccggct gcatcgggca gtgattgtcc tgttctgtct tgccttgtta gtggcgctga
    10681 tgcagggagc gtcatggttt agtcaaaacc accagcgaca acgtaatcca cagctggaag
    10741 aactggcccg caccctggcg cgtcaggtaa cgctgaacgt tgcaccgctg atgcgtaccg
    10801 actcaccgga tgaaaaacgc attcaggcga tcctcgatca gttaacggat gaaagccgta
    10861 tcctcgacgc gggtgtgtat gacgaacaag gcgatcttat cgcccgttct ggcgaaagcg
    10921 tcgaagtgcg cgaccggctg gcgctcgacg gtaaaaaagc gggcggctat tttaaccagc
    10981 agattgtcga accaattgcc gggaaaaacg gaccgctcgg ctatctgcgc ctgacgctcg
    11041 acacccatac gctcgccacc gaagcccaac aggtggataa caccactaac attttacgcc
    11101 tgatgttgct gctttcactg gcaatcggcg tagtgctgac ccgcacgctg ctacagggta
    11161 aacgtacccg ctggcagcaa tcgcccttcc tgttaaccgc cagcaaaccg gtgccggaag
    11221 aggaagaaag cgagaaaaaa gagtgaccca ttactacaag aaaggaaatc gttatgtcca
    11281 cattacgcct gctcatctct gactcttacg acccgtggtt taacctggcg gtggaggagt
    11341 gtatttttcg ccagatgccc gccacgcagc gcgttctgtt tctctggcgc aatgccgaca
    11401 cggtagtgat tggtcgcgcg cagaacccgt ggaaagagtg taatacccgg cggatggaag
    11461 aagataacgt ccgcctggca cggcgcagta gcggtggcgg cgcggtgttc cacgatctcg
    11521 gcaatacctg ctttaccttt atggctggca agccggagta cgataaaacc atctccacgt
    11581 cgattgtgct caatgcgctg aacgcgcttg gcgtcagcgc cgaagcgtcc gggcgtaacg
    11641 atctggtggt gaaaaccgcc gaaggtgacc gcaaagtctc aggatcggcc tatcgcgaaa
    11701 ccaaagatcg tggcttccac cacggcacct tgctgctcaa tgccgacctt agccgcctgg
    11761 caaactatct caatccggat aaaaagaaac tggcggcgaa aggcattacc tcagtgcgtt
    11821 cccgcgtgac caacctcacc gagctgctgc cggggatcac ccatgagcag gtttgcgagg
    11881 ccataaccaa ggcctttttc gcccattatg gcgagcgtgt agaagcggaa atcatctccc
    11941 cggacaaaac gccagacttg ccaaacttcg ccgaaatctt tgcccgtcag agtagctggg
    12001 aatggaactt cggtcaggct ccggcattct cgcatctgct ggatgaacgc tttagctggg
    12061 gcggcgtgga actgcatttc gacgttgaaa aaggccatat cacccgcgcc caggtgttta
    12121 ccgacagcct caaccccgcg ccgctggaag ccctcgccgg gcgactgcaa ggcggcctgt
    12181 accgcgcgga tatgctgcaa caagagtgcg aagcgctgtt ggttgacttc ccggaccagg
    12241 aaaaagagct acgggagttg tcgacgtgga tagcgggggc ggtaaggtaa ctcgctgatt
    12301 aaaataccaa aggaagggaa tatgatcgat ctggaaaacc aggagcggga gattatcaat
    12361 ataatgttaa gccagcgtat ttcctggcta gccgccgtgc gtatcaggca taaattatcg
    12421 cttgctgaag taagtaaaat gttaggtatc tcgattaatt ctctaaaata gatcgaaaag
    12481 acggaacggt ttagctcaaa catcaaaagc aaaatggcag aaatttatgg ttgtccacca
    12541 gagttgctga tatgcccttc ctggatgacg gctgaacata aatgaatag
//
LOCUS       DAPGWB010000129        12539 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.131, whole genome shotgun sequence.
ACCESSION   DAPGWB010000129 DAPGWB010000000
VERSION     DAPGWB010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12539
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.131"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(76..1359)
                     /gene="gltA"
                     /locus_tag="RHX79_003504"
     CDS             complement(76..1359)
                     /gene="gltA"
                     /locus_tag="RHX79_003504"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HDV2198634.1"
                     /translation="MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFD
                     PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYD
                     EFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI
                     AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILER
                     AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML
                     EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD
                     DLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW
                     IAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR"
     gene            complement(1565..1672)
                     /locus_tag="RHX79_003505"
     CDS             complement(1565..1672)
                     /locus_tag="RHX79_003505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198635.1"
                     /translation="MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV"
     gene            2053..2457
                     /gene="sdhC"
                     /locus_tag="RHX79_003506"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
     CDS             2053..2457
                     /gene="sdhC"
                     /locus_tag="RHX79_003506"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HDV2198636.1"
                     /translation="MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFI
                     AVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFG
                     YLEETFEAGKRSAKISFVITVVLSLLAGVLVW"
     gene            2451..2798
                     /gene="sdhD"
                     /locus_tag="RHX79_003507"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
     CDS             2451..2798
                     /gene="sdhD"
                     /locus_tag="RHX79_003507"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase membrane anchor subunit"
                     /protein_id="HDV2198637.1"
                     /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT
                     YEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALV
                     VYVIYGFVVVWGV"
     gene            2798..4564
                     /gene="sdhA"
                     /locus_tag="RHX79_003508"
     CDS             2798..4564
                     /gene="sdhA"
                     /locus_tag="RHX79_003508"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HDV2198638.1"
                     /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS
                     HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM
                     GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI
                     FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN
                     TGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY
                     APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS
                     RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV
                     SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNN
                     RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT
                     QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESM
                     TRRSVNMEPKLRPAFPPKIRTY"
     gene            4580..5296
                     /gene="sdhB"
                     /locus_tag="RHX79_003509"
     CDS             4580..5296
                     /gene="sdhB"
                     /locus_tag="RHX79_003509"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit
                     SdhB"
                     /protein_id="HDV2198639.1"
                     /translation="MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKE
                     KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRD
                     LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP
                     SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPK
                     GLNPTRAIGHIKSMLLQRNA"
     gene            5497..8298
                     /gene="sucA"
                     /locus_tag="RHX79_003510"
     CDS             5497..8298
                     /gene="sucA"
                     /locus_tag="RHX79_003510"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HDV2198640.1"
                     /translation="MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRST
                     FQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFR
                     GHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEAL
                     KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLG
                     AKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQ
                     DLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSV
                     RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV
                     GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI
                     DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNL
                     YRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPE
                     AVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
                     HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIW
                     EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL
                     CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT
                     FLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAM
                     QEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGY
                     MSVHQKQQQDLVNDALNVE"
     gene            8313..9530
                     /gene="odhB"
                     /locus_tag="RHX79_003511"
     CDS             8313..9530
                     /gene="odhB"
                     /locus_tag="RHX79_003511"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HDV2198641.1"
                     /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK
                     VVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ
                     QASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAP
                     AAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRK
                     QYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTP
                     RGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS
                     TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIK
                     ELLEDPTRLLLDV"
     gene            9624..10790
                     /gene="sucC"
                     /locus_tag="RHX79_003512"
     CDS             9624..10790
                     /gene="sucC"
                     /locus_tag="RHX79_003512"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDV2198642.1"
                     /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV
                     VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT
                     DIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQG
                     RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA
                     DGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIG
                     AVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK"
     gene            10790..11659
                     /gene="sucD"
                     /locus_tag="RHX79_003513"
     CDS             10790..11659
                     /gene="sucD"
                     /locus_tag="RHX79_003513"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDV2198643.1"
                     /translation="MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG
                     GTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT
                     LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYE
                     AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA
                     AAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS
                     LADIGEALKTVLK"
     gene            complement(11763..12485)
                     /gene="mngR"
                     /locus_tag="RHX79_003514"
     CDS             complement(11763..12485)
                     /gene="mngR"
                     /locus_tag="RHX79_003514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-D-glycerate transport/metabolism system
                     transcriptional repressor MngR"
                     /protein_id="HDV2198644.1"
                     /translation="MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRV
                     TVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIF
                     EVIPADDFLQQQLQITAQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENS
                     KYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEY
                     SRNAFNTDDYKFTLIAQRKSSR"
BASE COUNT         3006 a         3197 c         3396 g         2940 t
ORIGIN      
        1 ttgtgtttag gcatataaaa attaacccgc catttgaacg gcgggttaaa atatttacaa
       61 cttagcaatc aaccattaac gcttgatatc gcttttaaag tcgcgttttt catatcctgt
      121 atacagctga cgcggacggg caatcttcat accgtcactg tgcatttcgc tccagtgggc
      181 gatccagcca acggtacgtg ccattgcgaa aatgacggtg aacatggaag acggaatacc
      241 catcgctttc aggatgatac cagagtagaa atcgacgttc gggtacagtt tcttctcgat
      301 aaagtacggg tcgttcagcg cgatgttttc cagctccata gccacttcca gcaggtcatc
      361 tttggtgccc agctctttca gaacttcatg gcaggtttca cgcattacgg tggcgcgcgg
      421 gtcgtaattt ttgtacacgc ggtgaccgaa gcccatcagg cggaaagaat catttttatc
      481 tttcgcacga cgaacaaatt ccggaatgtg tttaacggag ctaatttctt ccagcatttt
      541 cagcgccgct tcgttagcac caccgtgcgc aggtccccac agtgaagcaa tacctgctgc
      601 gatacaggca aacgggttcg cacccgaaga gccagcggta cgcacggtgg aggtagaggc
      661 gttctgttca tggtcagcgt gcaggatcag aatacggtcc atagcacgtt ccagaatcgg
      721 attaacttca tacggttcgc acggcgtgga gaacatcata ttcaggaagt taccggcata
      781 ggagagatcg ttgcgcggat aaacaaatgg ctgaccaatg gaatacttgt aacacatcgc
      841 ggccatggtc ggcattttcg acagcaggcg gaacgcggca atttcacgat gacgaggatt
      901 gttaacatcc agcgagtcgt gatagaacgc cgccagcgcg ccggtaatac cacacatgac
      961 tgccattgga tgtgagtcgc gacggaaagc gtggaacaga cgggtaatct gctcgtggat
     1021 catggtatga cgggtcaccg tagttttaaa ttcgtcatac tgttcctgag tcggtttttc
     1081 accattcagc aggatgtaac aaacttccag gtagttagaa tcggtcgcca gctgatcgat
     1141 cgggaaaccg cggtgcagca aaataccttc atcaccatca ataaaagtaa ttttagattc
     1201 gcaggatgcg gttgaagtga agcctgggtc aaaggtgaac acaccttttg aaccgagagt
     1261 acggatatca ataacatctt gacccagcgt gcctttcagc acatccagtt caacagctgt
     1321 gtccccgttg agggtgagtt ttgcttttgt atcagccatt taaggtctcc ttagcgcctt
     1381 attacgtaag actgccggaa cttaaatttg ccttcgcaca tcaacctggc tttacccgtt
     1441 tgttatttgg ctcgccgctc tgtgaaagag gggaaaacct gggtacagag ctctgggcgc
     1501 ttgcaggtaa aggatccatt gatgacgaat aaatggcgaa tcaagtactt agcaatccga
     1561 attattaaac ttgtctacca ctaataactg tcccgaatga attggtcaat acttccacac
     1621 tgttacataa gttaatctta ggtgaaatac cgacttcata acttttacgc attatatgct
     1681 tttcctggta atgtttgtaa caactttgtt gaatgattgt caaattagat gattaaaaat
     1741 taaataaatg ttgttatcgt gacctggatc actgttcagg ataaaacccg acaaactata
     1801 tgtaggttaa ttgtaatgat tttgtgaacg gcctatactg ccgccaggtc tccggaacac
     1861 cctgcaatcc cgagccaccc agcgttgtaa cgtgtcgttt tcgcatctgg aagcagtgtt
     1921 ttgcatgacg cgcagttata gaaaggacgc tgtctgaccc gcaagcagac cggaggaagg
     1981 aaatcccgac gtctccaggt aacagaaagt taacctctgt gcccgtagtc cccagggaat
     2041 aataagaaca gcatgtgggc gttattcatg ataagaaatg tgaaaaaaca aagacctgtt
     2101 aatctggacc tacagaccat ccggttcccc atcacggcga tagcgtccat tctccatcgc
     2161 gtttccggtg tgatcacctt tattgcagtg ggtatcctgc tgtggcttct gggtaccagc
     2221 ctctcttccc ctgaaggttt cgagcaagct tccgcgatta tgggcagctt cttcgtcaaa
     2281 tttatcatgt ggggcatcct taccgctctg gcgtatcacg tcgtcgtagg tattcgccac
     2341 atgatgatgg attttggcta tctggaagaa acattcgaag cgggtaaacg ctccgccaaa
     2401 atctcctttg ttattactgt cgtgctttca cttctcgcag gagtcctcgt atggtaagca
     2461 acgcctccgc attaggacgc aatggcgtac atgatttcat cctcgttcgc gctaccgcta
     2521 tcgtcctgac gctctacatc atttatatgg tcggtttttt cgctaccagt ggcgagctga
     2581 catatgaagt ctggatcggt ttcttcgcct ctgcgttcac caaagtgttc accctgctgg
     2641 cgctgttttc tatcttgatc catgcctgga tcggcatgtg gcaggtgttg accgactacg
     2701 ttaaaccgct ggccttgcgc ctgatgctgc aactggtgat tgtcgttgct ctggtggttt
     2761 acgtgattta tggattcgtt gtggtgtggg gtgtgtgatg aaattgccag tcagagaatt
     2821 tgatgcagtt gtgattggtg ccggtggcgc aggtatgcgc gcggcgctgc aaatttccca
     2881 gagcggtcaa acctgtgcgc tgctctctaa agtcttcccg acccgttccc ataccgtttc
     2941 tgcgcaaggc ggcattaccg ttgcgctggg taatacccat gaagataact gggaatggca
     3001 tatgtacgac accgtaaaag gttcggacta tatcggtgac caggacgcga ttgaatatat
     3061 gtgtaaaacc gggccggaag cgattctgga actcgaacac atgggcctgc cgttctcgcg
     3121 tcttgatgat ggtcgtatct atcaacgtcc gtttggcggt cagtcgaaaa acttcggcgg
     3181 cgagcaggcg gcacgcactg cggcagcagc tgaccgtacc ggtcacgcac tgttgcatac
     3241 cctttatcag cagaacctga aaaaccacac cactattttc tccgagtggt atgcgctgga
     3301 tctggtgaaa aaccaggatg gcgcggtggt gggttgtact gcactgtgca tcgaaactgg
     3361 tgaagtggtt tatttcaaag cccgcgctac cgtgctggcg actggcgggg cagggcgtat
     3421 ttatcagtcc accactaacg cccacattaa cactggcgac ggcgtcggca tggctatccg
     3481 cgcaggcgta ccggtgcagg atatggaaat gtggcagttc cacccgaccg gtattgccgg
     3541 tgcgggcgta ctggtcaccg aaggttgccg tggtgaaggc ggttatctgc tgaacaaaca
     3601 tggcgaacgc tttatggagc gttatgcgcc gaacgccaaa gacctggcgg gccgtgacgt
     3661 ggtggcgcgt tccatcatga ttgaaatccg tgaaggtcgc ggctgtgatg gtccgtgggg
     3721 gccacatgcg aaactgaaac tcgaccacct gggtaaagaa gttctcgaat cccgtctgcc
     3781 gggtattctg gaactctccc gtaccttcgc tcacgttgat ccggtgaaag agccgattcc
     3841 ggttatccca acctgtcact acatgatggg cggtattccg accaaagtga ccggtcaggc
     3901 gctgacggtg aacgagaaag gcgaagatgt ggttgttccg ggactgtttg ccgttggtga
     3961 aatcgcttgt gtatcggtac acggcgctaa ccgtctgggc ggcaactcgc tgctggacct
     4021 ggtggtcttt ggtcgtgcag cgggtctgca tctgcaagag tctatcgccg aacagggcgc
     4081 attgcgcgat gccagcgagt ctgatgttga agcatctctg gatcgtctga accgctggaa
     4141 caataatcgt aacggtgaag atccggtggc gattcgtaaa gcgctgcaag aatgtatgca
     4201 gcataacttc tcggtcttcc gtgaaggtga tgcgatggcg aaagggcttg agcagttgaa
     4261 agttatccgc gagcgtctga aaaatgcccg tctggatgac acttccagcg agttcaacac
     4321 ccagcgcgtt gagtgcctgg aactggataa cctgatggaa acggcgtatg caacggctgt
     4381 ttctgccaac ttccgtaccg aaagccgtgg cgcacatagc cgcttcgact tcccggatcg
     4441 tgatgatgaa aactggctgt gccactccct gtatctgcca gagtcggaat ccatgacgcg
     4501 ccgaagcgtc aacatggaac cgaaactgcg cccggcattc ccgccgaaga ttcgtactta
     4561 ctaatgcgga gacaggaaaa tgagactcga gttttcaatt tatcgctata acccggatgt
     4621 tgatgatgct ccgcgtatgc aggattacac cctggaagcg gaagaaggtc gcgacatgat
     4681 gctgctggat gcgcttatcc agctgaaaga gaaagatccc agcctgtcgt tccgccgctc
     4741 ctgccgtgaa ggtgtgtgcg gttccgacgg tctgaacatg aacggcaaga atggtctggc
     4801 ctgtattacc ccgatttcgg cactcaacca gccgggcaag aagattgtga ttcgcccgct
     4861 gccaggttta ccggtgatcc gcgatttggt ggtagacatg ggacaattct atgcgcaata
     4921 tgagaaaatt aagccttacc tgttgaataa tggacaaaat ccgccagctc gcgagcattt
     4981 acagatgcca gagcagcgcg aaaaactcga cgggctgtat gaatgtattc tctgcgcatg
     5041 ttgttcaacc tcttgtccgt ctttctggtg gaatcccgat aagtttatcg gcccggcagg
     5101 cttgttagcg gcatatcgtt tcctgatcga tagccgtgat accgagactg acagccgcct
     5161 cgacggtttg agcgatgcat tcagtgtatt ccgctgtcac agcatcatga actgcgtcag
     5221 tgtatgtccg aaggggctga acccgacgcg cgccatcggc catatcaagt cgatgttgtt
     5281 gcaacgtaat gcgtaattaa atgttgatgc cggggaaatc ccccggctat tcaggaaatc
     5341 tttaaaaact gcccctgaca ctaagacagt ttttaaaggt tccttcgcga gccactacgt
     5401 agacaagagc tcgcaagtga accccggcac gcacataact gtgcgtggta gtatccacgg
     5461 cgaagtaagc ataaaaaaga tgcttaaggg atcacgatgc agaacagcgc tttgaaagcc
     5521 tggttggact cttcttacct ctctggcgca aaccagagct ggatagaaca gctctatgaa
     5581 gacttcttaa ccgatcctga ctcggttgac gctaactggc gttcgacgtt ccagcagtta
     5641 cctggtacgg gagtcaaacc ggatcaattc cactctcaaa cgcgtgaata tttccgccgc
     5701 ctggcgaaag acgcttcacg ttactcttca acgatctccg accctgacac caatgtgaag
     5761 caggtaaaag tcctgcagct cattaacgca taccgcttcc gtggtcacca gcatgcgaat
     5821 ctcgatccgc tgggactgtg gcagcaagat aaagtggccg atctggatcc gtctttccac
     5881 gatctgaccg aagcagactt ccaggagacc ttcaacgtcg gttcatttgc cagcggcaaa
     5941 gaaaccatga aactcggcga gctgctggaa gccctcaagc aaacctactg cggcccgatt
     6001 ggtgccgagt atatgcacat taccagcacc gaagaaaaac gctggatcca acagcgtatc
     6061 gagtctggtc gcgcgacttt caatagcgaa gagaaaaaac gcttcttaag cgaactgacc
     6121 gccgctgaag gccttgaacg ttacctcggc gcaaaattcc ctggcgcaaa acgcttctcg
     6181 ctggaaggcg gtgacgcgtt aatcccgatg cttaaagaga tgatccgcca cgctggcaac
     6241 agcggcaccc gggaagtggt tctcgggatg gcgcaccgtg gtcgtctgaa cgtgttggtg
     6301 aacgtgctgg gtaaaaaacc gcaagacttg ttcgacgagt ttgccggtaa acataaagaa
     6361 cacctcggca cgggtgacgt gaaataccac atgggcttct cgtctgactt ccagaccgat
     6421 ggcggcctgg tgcacctggc gctggcgttt aacccgtctc accttgagat tgtaagcccg
     6481 gtcgttatcg gctctgttcg tgcccgtctg gacagacttg atgagccgag cagcaacaaa
     6541 gtgctgccaa ttaccatcca cggtgacgcc gcagtgaccg gacagggcgt ggttcaggaa
     6601 accctgaaca tgtcgaaagc gcgtggttat gaagttggcg gtacggtacg tatcgttatc
     6661 aacaaccagg ttggtttcac cacctctaat ccgctggatg cccgttctac gccgtactgt
     6721 actgatatcg gcaagatggt tcaggcaccg attttccacg ttaacgcgga cgatccggaa
     6781 gccgttgcct ttgtgacccg tctggcgctc gatttccgta acacctttaa acgtgatgtc
     6841 ttcatcgacc tggtatgcta ccgccgtcac ggccacaacg aagccgacga gccgagcgca
     6901 acccagccgc tgatgtatca gaaaatcaaa aaacatccga caccgcgcaa aatctacgct
     6961 gacaagctgg agcaggaaaa agtggcgacg ctggaagatg ccaccgagat ggttaacctg
     7021 taccgcgatg cgctggatgc tggcgattgc gtggtagcag agtggcgtcc gatgaacatg
     7081 cactctttca cctggtcgcc gtacctcaac cacgaatggg acgaagagta cccgaacaaa
     7141 gttgagatga agcgcctgca ggaactggct aaacgcatca gcacggtgcc ggaagcggtt
     7201 gaaatgcagt ctcgcgttgc caagatttat ggcgatcgcc aggcgatggc tgccggtgag
     7261 aaactgttcg actggggcgg cgcggaaaac ctcgcttacg ccacgctggt tgacgaaggc
     7321 attccggttc gcctgtcggg tgaagactcc ggtcgcggta ccttcttcca ccgccacgcg
     7381 gtgatccaca accagtctaa cggttccact tacacgccgc tgcaacacat ccataacggc
     7441 cagggcgcgt tccgtgtttg ggactccgta ctgtctgaag aagcagtgct ggcgtttgaa
     7501 tacggttatg ccaccgcaga accacgcacc ctgaccatct gggaagcgca gttcggtgac
     7561 ttcgccaacg gtgcgcaggt ggttatcgac cagttcatct cctctggcga gcagaaatgg
     7621 ggccggatgt gtggtctggt gatgttgctg ccgcacggtt acgaagggca ggggccggag
     7681 cactcctccg cgcgtctgga acgttatctg caactttgtg ctgagcaaaa catgcaggtg
     7741 tgcgtaccgt ctaccccggc acaggtttac cacatgctgc gtcgtcaggc gctgcgcggg
     7801 atgcgtcgtc cgctggtcgt gatgtcgccg aaatccctgc tgcgtcatcc gctggcggtt
     7861 tccagcctcg aagaactggc gaacggcacc ttcctgccag ccatcggtga aatcgacgag
     7921 cttgatccga agggcgtgaa gcgcgtagtg atgtgttctg gtaaggttta ttacgacctg
     7981 ctggaacagc gtcgtaagaa caatcaacac gatgtcgcca ttgtgcgtat cgagcaactc
     8041 tacccgttcc cgcataaagc gatgcaggaa gtgttgcagc agtttgctca cgtcaaggat
     8101 tttgtctggt gccaggaaga gccgctcaac cagggcgcat ggtactgcag ccagcatcat
     8161 ttccgtgaag tgattccgtt tggggcttct ctgcgttatg caggccgccc ggcctccgcc
     8221 tctccggcgg tagggtatat gtccgttcac cagaaacagc aacaagatct ggttaatgac
     8281 gcgctgaacg tcgaataaat aaaggataca caatgagtag cgtagatatt ctggtccctg
     8341 acctgcctga atccgtagcc gatgccaccg tcgcaacctg gcataaaaaa cccggcgacg
     8401 cagtcgtacg tgatgaagtg ctggtagaaa tcgaaactga caaagtggta ctggaagtac
     8461 cggcatcagc agacggcatt ctggatgcgg ttctggaaga tgaaggtaca acggtaacgt
     8521 ctcgtcagat ccttggtcgc ctgcgtgaag gcaacagcgc cggtaaagaa accagcgcca
     8581 aatctgaaga gaaagcgtcc actccggcgc aacgccagca ggcgtctctg gaagagcaaa
     8641 acaacgatgc gttaagcccg gcgatccgtc gcctgctggc tgaacacaat ctcgacgcca
     8701 gcgccattaa aggcaccggt gtgggtggtc gtctgactcg tgaagatgtg gaaaaacatc
     8761 tggcgaaagc cccggcgaaa gagtctgctc cggcagcggc tgctccggcg gcgcaaccgg
     8821 ctctggctgc acgtagtgaa aaacgtgtcc cgatgactcg cctgcgtaag cgtgtggcag
     8881 agcgtctgct ggaagcgaaa aactccaccg ccatgctgac cacgttcaac gaagtcaaca
     8941 tgaagccgat tatggatctg cgtaagcagt acggtgaagc gtttgaaaaa cgccacggca
     9001 tccgtctggg ctttatgtcc ttctacgtga aagcggtggt tgaagccctg aaacgttacc
     9061 cggaagtgaa cgcgtctatc gacggcgatg acgtggttta ccacaactat ttcgacgtca
     9121 gcatggcggt ttctacgccg cgcggcctgg tgacaccggt actgcgtgat gtcgataccc
     9181 tcggcatggc agacatcgag aagaaaatca aagagctggc agtcaaaggc cgtgacggca
     9241 agctgaccgt tgaagatctg accggtggta acttcaccat caccaacggt ggtgtgttcg
     9301 gttccctgat gtctacgccg atcatcaacc cgccgcagag cgcaattctg ggtatgcacg
     9361 ctatcaaaga tcgtccgatg gcggtgaatg gtcaggttga gatcctgccg atgatgtacc
     9421 tggcgctgtc ctacgatcac cgtctgatcg atggtcgcga atccgtgggc ttcctggtaa
     9481 cgatcaaaga gttgctggaa gatccgacgc gtctgctgct ggacgtgtag tagtttaagc
     9541 ttcacctgca ctgtagaccg acgtggatag ggtgtcggtc tacggtttaa aagataacga
     9601 ttactgaagg atggacagaa cacatgaact tacatgaata tcaggcaaaa caactttttg
     9661 cccgctatgg cttaccagca ccggtgggtt atgcctgtac tactccgcgc gaagcagaag
     9721 aagccgcttc aaaaatcggt gccggcccgt gggtagtgaa atgtcaggtt cacgctggtg
     9781 gccgcggtaa agcgggcggt gtgaaagttg taaacagcaa agaagacatc cgtgcttttg
     9841 cagaaaactg gctcggcaag cgtctggtaa cgtatcaaac agatgccaat ggccaaccgg
     9901 ttaaccagat tctggttgaa gcagcgaccg atatcgctaa agagctgtat ctcggtgccg
     9961 ttgtagaccg tagttcccgt cgtgtggtct ttatggcctc caccgaaggc ggcgtggaaa
    10021 tcgaaaaagt ggcggaagaa actccgcacc tgatccacaa agttgcgctt gatccgctga
    10081 ctggcccgat gccgtatcag ggacgcgagc tggcgttcaa actgggtctg gaaggtaaac
    10141 tggttcagca gttcaccaaa atcttcatgg gcctggcgac cattttcctg gagcgcgacc
    10201 tggcgttgat cgaaatcaac ccgctggtca tcaccaaaca gggcgatctg atttgcctcg
    10261 acggcaaact gggcgctgac ggcaacgcac tgttccgcca gcctgatctg cgcgaaatgc
    10321 gtgaccagtc gcaggaagat ccgcgtgaag cacaggctgc acagtgggaa ctgaactacg
    10381 ttgcgctgga cggtaacatc ggttgtatgg ttaacggcgc aggtctggcg atgggtacga
    10441 tggacatcgt taaactgcac ggcggcgaac cggctaactt ccttgacgtt ggcggcggcg
    10501 caaccaaaga acgtgtaacc gaagcgttca aaatcatcct ctctgacgac aaagtgaaag
    10561 ccgttctggt taacatcttc ggcggtatcg ttcgttgcga cctgatcgct gacggtatca
    10621 tcggcgcggt agcagaagtg ggtgttaacg taccggtcgt ggtacgtctg gaaggtaaca
    10681 acgccgaact cggcgcgaag aaactggctg acagcggcct gaatattatt gcagcaaaag
    10741 gtctgacgga tgcagctcag caggttgttg ccgcagtgga ggggaaataa tgtccatttt
    10801 aattgataaa aacaccaagg ttatctgcca gggctttact ggtagccagg ggactttcca
    10861 ctcagaacag gccattgcat acggcactaa aatggttggc ggcgtaaccc caggtaaagg
    10921 cggtactacc cacctcggcc tgccggtgtt caacaccgtg cgtgaagctg ttgctgctac
    10981 tggcgctacc gcttctgtta tctacgtacc agcaccgttc tgcaaagact ccattctgga
    11041 agctattgat gcaggcatca aactgattat caccatcact gaaggcatcc cgacgctgga
    11101 tatgctgact gtgaaagtga aactggacga agccggcgtt cgtatgatcg gcccgaactg
    11161 cccgggcgtt atcactccgg gtgaatgcaa aatcggtatc cagccgggtc acattcacaa
    11221 accgggtaaa gtgggtatcg tttcccgttc cggtacactg acctatgaag cggttaaaca
    11281 gaccacggat tacggtttcg gtcagtcgac ctgtgttggt atcggcggtg acccgatccc
    11341 tggctctaac tttatcgaca ttctcgaaat gttcgaaaaa gatccgcaga ccgaagcgat
    11401 cgtaatgatc ggtgagatcg gcggtagcgc tgaagaagaa gcggcagcgt acatcaaaga
    11461 gcatgttacc aagccagttg tgggttacat cgctggtgtg actgcgccga aaggcaaacg
    11521 tatgggccac gcgggtgcca tcattgccgg tgggaaaggg actgcggatg agaaattcgc
    11581 tgctctggaa gccgcaggcg tgaaaaccgt tcgcagcctg gcggatatcg gtgaagcact
    11641 gaaaactgtt ctgaaataaa tatctgtaat aagaaatagc cctcgccgct tccctctaca
    11701 ggaatggcga agggctgtcg gtttcgacat ggttggccat cgtatgatgg ccttttttgt
    11761 gcttatcgcg atgattttcg ttgcgctatc agggtaaatt tatagtcatc ggtattaaaa
    11821 gcgttgcggc tatattcaaa cacccgacca tcaactaaat atccacgcga tactttttca
    11881 agaatcggct ttgtctggct gatattaagc agacggctca tctcttcggt tggcatcaga
    11941 ggaatgattt cctgttcgct acgatcgata accattttct tcacttcttc aataaagtga
    12001 tattttgaat tttccatgac ctgccaggtg agatccggga acaacgcaag cggcatccag
    12061 gtttcttcca gcgccattgg cttttgcttg cgatagcgca cgcgcttcac atgccacaca
    12121 cgatcctgcg cggtgatttg tagctgttgc tgaagaaaat cgtcagccgg aatcacttca
    12181 aatatcagga cttcactgtg tgtatcgacg tgacggtccg acagtttttc atcaaaactg
    12241 gttaactgaa aaatatcgta attgacccgc tcttctttga cgtaagtccc gctgccctga
    12301 atgctttcga ggatctgttg ctcgactaac tggcgcaaag cctgacgcac cgtaacccgg
    12361 ctgacgccaa actctgtttg taatgccgat tcggtaggta acgcatcgcc aggtttaagc
    12421 tcgccacgcg caatttgttc acgaatgcga tcggcaatct gccggtataa gggcttgtgt
    12481 cccattttta gtatctcatt aatacgaatt tagccattat gcccgataaa ttcatcctg
//
LOCUS       DAPGWB010000130        12444 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.132, whole genome shotgun sequence.
ACCESSION   DAPGWB010000130 DAPGWB010000000
VERSION     DAPGWB010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12444
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.132"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..983)
                     /locus_tag="RHX79_003515"
     CDS             complement(<1..983)
                     /locus_tag="RHX79_003515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2198645.1"
                     /translation="MSTKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGALPTP
                     DAKQTALVNEKRRAALNMLYIDPQNSSQIIAEQVIPENEGGWWIREVGLFDESGALIA
                     VGNCPESYKPQLAEGSGRTQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKISEHE
                     QSRRHPDASLTAKGFTQLSSATNSESEILAATPKAVKAAYDLAAGKASASHTHPWNQI
                     TGVPAASLTVKGTVQLSSATNSISETQAATPKAVKAAYDLAAGKAPVSHTHPWNQITD
                     VPAASLTVKGTVQLSSATNSTSETQAATPKAVKEAYDLAAGKAPVSHSHPW"
     gene            complement(980..1585)
                     /locus_tag="RHX79_003516"
     CDS             complement(980..1585)
                     /locus_tag="RHX79_003516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HDV2198646.1"
                     /translation="MNSLLPPGSTSLERRLAQTCSGISDLQVPLRDLWNPATCPVSFL
                     PYLAWAFSVDRWDEGWTESVKRQVVKDAFYIHQHKGTTSAVRRVVEPFGFLIRIIEWW
                     QTGEAPGTFRLDIGVQDQGITEDTYLELERLISDAKPCSRHMSGMSINLQTSGPHWVG
                     AASYLGEEITIYPYINETIISGGTAHEGGAVHVIDTMRVNP"
     gene            complement(1578..2486)
                     /locus_tag="RHX79_003517"
     CDS             complement(1578..2486)
                     /locus_tag="RHX79_003517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HDV2198647.1"
                     /translation="MAVIDLSQLPAPQIVDVPDFETLLAERKAEFVALHPKDEQEAVI
                     RTLELESEPVTKLLQENAYRELLLRQRINEAAQAVMVAYAMGGDLDQLAANYNVKRLT
                     VTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASV
                     TSPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVE
                     ATIFLYPGPEAEPVMAAAKASLQKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASP
                     LADVVLNKTQAASCTQWSVTNGGADE"
     gene            complement(2473..2832)
                     /locus_tag="RHX79_003518"
     CDS             complement(2473..2832)
                     /locus_tag="RHX79_003518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013098787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDV2198648.1"
                     /translation="MTLYIGMNNTSGKAITDIDHLRQSVRDILLTPQGSRIARREYGS
                     LLSTLIDQPQNPALRLQVMSAVYVALSRWEPRLTLDSITIKSNFDGSMVVGLTGRRNN
                     GVPVSLSVSTGAENGSD"
     gene            complement(2829..3407)
                     /locus_tag="RHX79_003519"
     CDS             complement(2829..3407)
                     /locus_tag="RHX79_003519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001552634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDV2198649.1"
                     /translation="MNAQLTEIMRLITNLIRTGVVTEVDREHWLCRVKTGDLETNWIN
                     WLTLRAGKSRTWWKPSVGEQVVLFSLGGNLETAFALPAVYSNQFPPPSGSEDGNVTEY
                     PDGGWFEYEPATGRWYVRGIKSMVIEAADNITMKTSEFVLEADRTRINSEVVINGGVT
                     QGGGAMSSNGIVVDAHQHTGVLKGGDTTGGPV"
     gene            complement(3476..3922)
                     /locus_tag="RHX79_003520"
     CDS             complement(3476..3922)
                     /locus_tag="RHX79_003520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDV2198650.1"
                     /translation="MAELQKVDDWLSALLANLEPAARSRMMRQLAQELRRTQQQNIRM
                     QRNPDGSSYEPRRVTARSKKGRIKRQMFTKLRTTKYLKTAASEDSASVQFEGKVQRIA
                     RVHHYGLRDRVSRKGPEVRYAERRLLGVNDDVEAMTRDMILQWLAG"
     gene            complement(3915..4346)
                     /locus_tag="RHX79_003521"
     CDS             complement(3915..4346)
                     /locus_tag="RHX79_003521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2198651.1"
                     /translation="MNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVATGASSMSW
                     EYRYTLNAVIEDFSGDQNLLMAPVLLWLRDNQPDAINNPALREKLFTFEVDILRNDVC
                     DISLNLQLTERVLVSTDGSVSSVEAIAEPDEPEEMWTVKRG"
     gene            complement(4442..4870)
                     /locus_tag="RHX79_003522"
     CDS             complement(4442..4870)
                     /locus_tag="RHX79_003522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysB family phage lysis regulatory protein"
                     /protein_id="HDV2198652.1"
                     /translation="MNRLLLVVLALLLAALGWQTWRLADASQTISTQADELQSKSQAL
                     AKSNSQLISLSILTETNNREQARLYAEAEQTSALLRQRQHRIEELKRENEDLRRWADT
                     PLPADIIRLRERPTLTGGAAYRQWLSASDAVLAGSGSAAH"
     gene            complement(4867..5244)
                     /locus_tag="RHX79_003523"
     CDS             complement(4867..5244)
                     /locus_tag="RHX79_003523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000730949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198653.1"
                     /translation="MKKKLISGLFLMLWMALLITAMVYPQGIFPVLAASGVWVACLLT
                     WAVIPVALAALIKNGPLWQELRASLLKTITRKENVFISWVMRLLIVVSLAWTGWAITL
                     VFYLLTVIAFWITRNQMAQQVAA"
     gene            complement(5246..5758)
                     /locus_tag="RHX79_003524"
     CDS             complement(5246..5758)
                     /locus_tag="RHX79_003524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001069913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDV2198654.1"
                     /translation="MNPSIVKRCLVGAVLAIAATLPGFQQLHTSVEGLKLIADYEGCR
                     LQPYQCSAGVWTDGIGNTSGVIPGKTITERQAAEGLISNVLRVERALERCVKQQPPQK
                     VYDAAVSFAFNVGTGNACSSTLVKLLNQRRWADACRQLQRWVYVKGVFNQGLDNRRAR
                     EMAWCLQGAN"
     gene            complement(5739..5954)
                     /locus_tag="RHX79_003525"
     CDS             complement(5739..5954)
                     /locus_tag="RHX79_003525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198655.1"
                     /translation="MTLERISAFITYCIAVVLAWLGDLSIKDASTLGGLMIGVLMLAI
                     NWYYKHKAYQLLRDGQISREDYESINR"
     gene            complement(5958..6161)
                     /locus_tag="RHX79_003526"
     CDS             complement(5958..6161)
                     /locus_tag="RHX79_003526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDV2198656.1"
                     /translation="MKVRAHQYDTVDALCWRHYGRTQGVTEQVLKANPGLAEYGPFLP
                     HGLQVELPDIPTTTTVQTVQLWD"
     gene            complement(6161..6625)
                     /locus_tag="RHX79_003527"
     CDS             complement(6161..6625)
                     /locus_tag="RHX79_003527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HDV2198657.1"
                     /translation="MKFVAPEQAPEQAEIIRNTPFWPDVDLSEFRSVMRTDGTVTQPR
                     LKQVALSAISEVNAELYEFRRRQQMLGYASLAEVPAEQLDGKSERIQHYFNAVYCWAR
                     AMLNERYQDYDATASGVKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI"
     gene            complement(6721..7371)
                     /locus_tag="RHX79_003528"
     CDS             complement(6721..7371)
                     /locus_tag="RHX79_003528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HDV2198658.1"
                     /translation="MSLSPARQHRLRVQAEQAAREGGSVRHASGYDLMLLQLAEDRRR
                     LKGVQSTVKKAEIKVELLPKYVAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALE
                     IGRHALRHGWVMPLGNRNVQTVLAEEMADAAQSAMLAATGFDADLLLQTLELTDGLDM
                     PDQSRARLHKAIGAVLSESNPASALNHLNHALQLDPRCGVKKDKQQLERRLRNDSR"
     gene            complement(7375..8433)
                     /locus_tag="RHX79_003529"
     CDS             complement(7375..8433)
                     /locus_tag="RHX79_003529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HDV2198659.1"
                     /translation="MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQ
                     IQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTTDTTAKEREPVDPTLMVDVEYKC
                     EQTNFDTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN
                     PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNE
                     LIDVVYQDDDDLVVICGRELLSDKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRA
                     PFFPPNALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAAL
                     VENIQIGDFSAAAAETGA"
     gene            complement(8450..9283)
                     /locus_tag="RHX79_003530"
     CDS             complement(8450..9283)
                     /locus_tag="RHX79_003530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HDV2198660.1"
                     /translation="MTVKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALIN
                     LEHIKSYLPDSTFNRYGKVTALFAEEITEGPLAGKMALYADVEPTESLVELVKKGQKL
                     FTSMEVSPKFADTGKAYLVGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFT
                     AAEETVIELEEIQDDKPSLFARVTALFTKKEQSDDARFSDMHKAVELVATEQQNLSAR
                     TEQSLSEQEERLSELETALQAQQTAFNELVDKLSHEDSRQDYRQRATGGNAPADTLTN
                     C"
     gene            9425..11191
                     /locus_tag="RHX79_003531"
     CDS             9425..11191
                     /locus_tag="RHX79_003531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HDV2198661.1"
                     /translation="MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWK
                     KRDKWGDYGPLDQMQLTTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNG
                     GNEADLNPNVANRNKGPRRQPEKNVFTDEQIEKLEEIFHSSMFNYQRHWWEAGKTNRI
                     RNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVEL
                     KGDPMVLPNGATLYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWR
                     QTYFSTPSSLTHSAYPFWSGALFNRGRNKADKVDIDLSHSNLAPGLLCADGQYRQIVT
                     VEDAVRGGCNLFDLDQLRMEYSPDEYQNLLMCEFVDDLASVFPLSELQACMVDSWEVW
                     TDFHALALRPFGWREVWIGYDPAKGTQNGDSAGCVVVAPPAVPGGKFRILERHQWRGM
                     DFRAQADAIKKLTEQYNVTYIGIDSTGVGHGVYENVKAFFPAVREFVYNPNVKNALVL
                     KAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATM
                     HALFNEPLQGESANTSNIVEIF"
     gene            11191..12216
                     /locus_tag="RHX79_003532"
     CDS             11191..12216
                     /locus_tag="RHX79_003532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000520350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDV2198662.1"
                     /translation="MRKSKKNRAAATKQIQLKSQTTAEAFSFGDPVPVLDRRELLDYV
                     ECVQMDRWYEPPVSFDGLARTFRAAVHHSSPIAVKCNILTSTYIPHPLLSQQAFSRFV
                     QDYLVFGNAYLEKRTNRFGEVITLEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKG
                     SIFHLMEPDINQEIYGLPGYLSAIPSTLLNESATLFRRKYYINGSHAGFIMYMTDAAQ
                     NQEDVNNLRNAMKSAKGPGNFRNLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSR
                     DDMMAAHRVPPQMMGIMPNNVGGFGDVEKAANVFVRNELIPLQRIIQGFNGFIGDDII
                     NFEKYKL"
BASE COUNT         2667 a         3662 c         3264 g         2851 t
ORIGIN      
        1 ctccacgggt gcgagtgact gacaggtgcc ttacctgctg caaggtcata tgcctccttc
       61 actgcctttg gtgtggcagc ctgcgtttct gacgtgctgt tagtggcact gctgagttgc
      121 acggtgcctt ttaccgtcag tgaagctgca ggcacatccg ttatctgatt ccacgggtgt
      181 gtgtgactga caggtgcctt acctgctgca aggtcatatg ccgccttcac tgcctttgga
      241 gtggcggcct gcgtttctga tatgctgtta gtggcgctgc tgagttgcac agtgcctttt
      301 accgtcagcg aggctgcagg tacacctgtt atctgattcc acgggtgtgt gtgactggcg
      361 gatgctttac ctgctgcaag atcatatgca gccttcacag ccttcggtgt tgcggccagt
      421 atttcggatt cactgttggt cgcactgctt aactgagtaa aaccttttgc ggtcagcgag
      481 gcgtccgggt gacgtcgtga ctgttcgtgc tctgatattt tgtcatccac atacttgcga
      541 gttgccagta ctacagcagg gtcgattttc agggtgatat tgtccgtact gctggtaatc
      601 agcaccatgc gcacggtctg ggtgcgcccg ctgccttcag ccagttgcgg tttatagctt
      661 tccgggcagt tccccacggc aatcaatgcc cctgactcat caaacaggcc cacttcacgt
      721 atccaccaac cgccctcgtt ttcagggatc acctgttcag caataatctg gctgctgttc
      781 tgcgggtcga tatagagcat attcagcgca gcccggcgtt tctcatttac cagtgcagtc
      841 tgctttgcgt ccggcgtcgg caatgctccg ccgccatcgc ccaccgccat atgggtaatt
      901 tttagcggca caccaagcgc ggcggcgctg gcaagtttcg ccgcgccaat atccgtcagc
      961 agggtataaa attttgtgct catggattca ctctcattgt gtcaataaca tggaccgccc
     1021 cgccttcatg cgcggtgccg ccggaaataa ttgtttcgtt gatatacgga tagatcgtga
     1081 tttcttcgcc aagatagctg gcggctccca cccaatgcgg gccgctggtc tgcaggttga
     1141 tggacatgcc gctcatgtga cggctacatg gtttggcatc gcttatcagt cgctcaagtt
     1201 ccagataggt atcttcagtg atgccctggt cctgcacgcc gatatccaga cgaaacgtgc
     1261 ccggtgcctc tccggtctgc caccactcaa taatgcggat cagaaagccg aacggctcca
     1321 ccacccgccg cacggcactg gtggtccctt tatgctgatg aatataaaaa gcatccttca
     1381 ccacctggcg cttgacgctt tctgtccagc cctcgtccca gcgatccaca gagaacgccc
     1441 aggcgagata aggcaggaaa ctgaccggac aggtagccgg attccacaag tcacgcagcg
     1501 gcacctgcaa atcagaaatc ccgctacagg tttgcgccag tcggcgctcc agtgaagttg
     1561 aacccggtgg cagcagacta ttcatccgct cctccgttgg ttacgctcca ctgcgtacat
     1621 gatgccgcct gtgttttgtt caggaccaca tccgccagcg gagaagccag ttccacacgt
     1681 tgaacaccct caacatgcag agcagcaaag atggcgctac ggcgaatatc ccgaccaagc
     1741 ctcgtctggc tggcaatgta cttctgcaga ctggcttttg ccgctgccat taccggctct
     1801 gcttccggtc ccggatagag aaaaatggtg gcttccacgc gatacggaat gatttctgcg
     1861 ctgcgaaccg taagacggtc agccaccggg cggacgttct cactgttcag ggctttctcc
     1921 accacatcca gcaagtcttt ttctgctgtt ccgtcgcctt cacgactcag gacagtcagt
     1981 accacctctg caggtgccgg actggttaca ctggcatccg ccacccgacc gtcggcgctt
     2041 cgggcatgaa attcataagc ggcagttggc cccgcaacag aaagcccttc aaaggctgcg
     2101 ggcacacgca ggcgtaacgc ttcatcgctt tccatcacag ccgcaacggg tggcacagcg
     2161 tcattatcag caggcgtcac cgtcaggcgt ttcacgttgt agttggcagc gagctggtca
     2221 agatcgccgc ccatcgcgta agccaccatc acagcctgcg cggcttcgtt aatgcgctgg
     2281 cgcagaagca actcacggta agcgttctcc tgcagcaatt tggtgacggg ttcagattcc
     2341 agttccagcg tgcggatcac ggcttcctgc tcatctttcg gatgaagcgc aacaaattcg
     2401 gccttgcgtt cggcaagcag cgtctcaaag tccggcacat cgacaatctg cggcgcaggc
     2461 aactgcgaaa ggtcaatcac tgccattctc tgctcctgtt gatacggaaa gggaaacagg
     2521 cacaccgtta ttacgccgcc cggtcagccc caccaccatt gaaccgtcaa aattgctttt
     2581 aatggtgatg gaatccagcg tcagccgtgg ctcccagcga ctcagcgcca catacactgc
     2641 cgacatgacc tgcaggcgta atgccggatt ttgtggctgg tctatcagtg tcgacagcag
     2701 ggaaccatat tcacgacggg caatgcggct accctgcggt gtcagtagaa tgtcccgcac
     2761 cgactgacgc agatggtcaa tatcagtaat ggctttaccg ctggtattgt tcatcccgat
     2821 ataaagcgtc ataccgggcc tccggttgta tcgccgcctt tcaggacgcc agtatgctga
     2881 tgcgcatcaa ccacgatccc gttagaactc atcgctccgc cgccctgggt aacgccacca
     2941 ttgatcacca cttcgctgtt aatgcgcgtg cggtcagcct ccagtacaaa ctcactggtt
     3001 ttcatggtga tgttgtcagc ggcctcaatg accattgatt tgatgcccct gacataccag
     3061 cgcccggtgg cgggttcgta ttcaaaccag ccgccgtccg ggtattccgt cacgttgccg
     3121 tcctcagagc ctgaaggtgg cggaaactgg tttgagtaga ccgcaggcag ggcaaacgcg
     3181 gtttccagat tgccgccaag gctgaacagc acaacctgct cacccacaga cggtttccac
     3241 caggtgcgcg atttgcccgc gcgcagcgtc agccagttaa tccagttggt ttcaaggtcg
     3301 cccgttttca cccgacaaag ccagtgttcc cggtccactt cggtgactac accagtgcgg
     3361 atcagattgg tgataaggcg catgatttcg gttaattgtg cgttcatagg gaaaggttgc
     3421 catcagggga agaaaggcgg cagtgctgca acttgtatca gtgctgatac aaaaatcacc
     3481 ccgccaacca ttgcagaatc atgtcgcggg tcattgcctc aacatcatca tttacgccca
     3541 gaaggcgacg ctctgcgtaa cggacctccg gtcctttgcg gctgacgcga tcacgcaggc
     3601 cataatggtg gacgcgggca atgcgctgca ccttaccttc aaactgcacg ctggcagagt
     3661 cctcgctggc ggcggttttc aggtattttg tggtgcgaag ttttgtaaac atctgccgtt
     3721 tgatacggcc ttttttactg cgtgctgtta ctcgcctcgg ttcatagctg ctgccatcag
     3781 gattgcgttg catcctgatg ttctgctgct gtgtccggcg cagttcctgc gccagctggc
     3841 gcatcatgcg gcttctggcg gctggttcca gattcgccag caaggcactc agccaatcgt
     3901 ccactttctg cagttcagcc acgtttcacc gtccacattt cttcaggttc atcaggttcc
     3961 gctatagctt caacactcga cacactaccg tcagtgctga ccagcacacg ctccgtcagt
     4021 tgcaggttca ggctgatatc acagacatcg ttgcgcagaa tatccacctc aaaggtgaat
     4081 agtttttccc gtaacgccgg gttattgatg gcatcgggct ggttatccct cagccacagc
     4141 aaaaccgggg ccatcagcag attctggtcg ccgctgaaat cctcaatcac cgcgttcagg
     4201 gtgtaacggt actcccacga catggagctg gcccccgtgg caaccagcga accgttatcc
     4261 acaaacagat gcagtttgtc cgggttattg cggacataag gcaccgcttt attgagggcg
     4321 tggcgcaggg attgtggttt gttcactgtt tcgctcctga cacgcaataa tcatgtccac
     4381 tttgtctgca cagaccgccc aggcggcctc cgtttcatcc agcaacgcgt tcagatcacc
     4441 gttagtgcgc ggcgctgcct gatccagcca acacggcgtc actcgcggac aaccactgac
     4501 ggtaagctgc acctccggtg agcgtcggac gttcccgcag ccggataatg tcagcaggca
     4561 aaggagtatc agcccagcgg cgtaaatcct cgttctcacg tttcagttcc tcgatccggt
     4621 gttgtcgttg tctcagcagc gcgctggtct gttctgcttc ggcatagagc cgcgcctgct
     4681 cccggttatt ggtttcagtc agaatggaca ggctgataag ctggctgttg ctctttgcca
     4741 gtgcctggct tttgctctgc agctcgtctg cctgcgtgct aatggtctgg ctggcatcag
     4801 ccagccgcca cgtctgccag cccagcgccg ccagtaataa cgccagcaca accagcagca
     4861 accggttcat gctgctacct gttgcgccat ctgattacgg gtgatccaga aggcaataac
     4921 ggtcagtaga taaaagacca gggtaatagc ccaccccgtc caggcgagac ttacaacaat
     4981 cagcaatcgc atcacccaac tgataaatac gttttctttt cgggtaattg tcttcagtaa
     5041 agatgccctt aactcctgcc agagcgggcc attcttaatt aacgcagcca gtgctaccgg
     5101 aattaccgcc catgtcagca aacaggctac ccaaacgccg gacgctgcca gtaccggaaa
     5161 aatcccctgc ggatacacca ttgctgtgat taacagcgcc atccataaca tcagaaacag
     5221 tccgctgatt aatttctttt tcatttcagt ttgctccctg taaacaccag gccatctccc
     5281 gcgcacggcg gttatccagc ccctgattaa acacaccttt tacataaacc cagcgctgca
     5341 actgtcggca cgcatccgcc cagcgccgct gattgagcaa tttcaccagc gtggaactgc
     5401 aggcattgcc cgtccccacg ttgaaggcaa acgacaccgc agcgtcatac accttctgcg
     5461 gtggctgttg cttcacacac ctttccagtg cccgctccac acgcagcacg ttggagatca
     5521 gcccttctgc tgcctgtcgt tccgtgattg ttttgccggg aatgacgccc gatgtattac
     5581 caatgccgtc ggtccagaca cccgcgctgc actgatacgg ctgcagacga caaccttcgt
     5641 aatcggcaat cagtttcagc ccctccacgg aggtgtgaag ctgctgaaaa cccggcagcg
     5701 tggcagcaat agccagcacg gccccgacaa ggcagcgttt aacgattgat ggattcatag
     5761 tcctcccgcg agatctgccc gtcgcgcaga agctggtagg ctttgtgttt gtagtaccag
     5821 ttgatagcca gcatcagcac accaatcatc aggccgccca gcgttgaggc atccttgatg
     5881 gacaaatctc ccagccaggc cagcacgacg gcgatgcaat acgtgataaa ggcgctgatt
     5941 cgctcaagcg tcataattca gtcccatagc tggacggtct gcacggtggt ggtggtcgga
     6001 atgtccggca gctccacctg cagcccgtga ggtaaaaagg ggccgtattc ggcaagcccc
     6061 ggatttgcct tcagtacctg ctccgtgaca ccctgcgtgc gcccgtaatg acgccagcaa
     6121 agtgcgtcca ccgtgtcata ctgatgcgca cgcactttca tcagataagc tccactgtgc
     6181 agtgcggcgc atcctgcacc cggctgatgg cccagcgggc gtcacgccac aaatcaccgc
     6241 tggcttctgc cagttcttcg cctcgcttca caccggatgc cgtggcgtca tagtcctggt
     6301 atcgttcgtt gagcatggcg cgtgcccagc agtaaaccgc gttgaaatag tgctgaatgc
     6361 gctcactttt gccgtccagc tgctccgccg gaacctctgc cagcgaggca tatcccagca
     6421 tctgctggcg tctgcgaaac tcatacagct ctgcgttgac ctccgaaatt gccgacagcg
     6481 caacctgctt taaacgcggc tgcgtcaccg tgccgtcagt gcgcatgaca ctgcgaaact
     6541 ccgacaggtc cacatcaggc cagaacggcg tgtttctgat gatttccgcc tgttccggtg
     6601 cctgttctgg cgcaacaaac ttcatgctgc tttctcctga aatagagggc ggtggacggg
     6661 gttttgatgt ggcagtgcct ttcgccaccc cgtgccgccc gtgcgcgggg gcacgttctg
     6721 tcagcggctg tcattgcgca gtctgcgctc cagctgctgt ttgtcttttt tcacgccaca
     6781 gcggggatcg agctgtaacg catggttgag atgattaagg gcggaagccg ggttgctttc
     6841 actcaggaca gcgccaatcg ctttatgcag acgcgcccgt gactggtccg gcatatccag
     6901 accgtctgtc agctccagcg tctgcagcaa cagatcggca tcaaagccgg tggcggcaag
     6961 cattgcgctc tgcgccgcgt ctgccatttc ctctgccagc acggtctgca cattgcgatt
     7021 acccagcggc atcacccagc catgacgcag ggcatgacgc ccgatctcca gcgccccggc
     7081 ataatctccg gcatcaatgc gccacagcat cacgtacatc agcacgtcat cctgttgagc
     7141 gcctccggca gccaggacac cctctgccca ggcgacgtat ttcggcagca gctccacctt
     7201 gatttccgct tttttgaccg tggactgaac gcccttgaga cggcggcggt cttccgccag
     7261 ttgcagcagc atcaggtcat agcccgacgc gtggcgaaca ctgccgccct cgcgggcggc
     7321 ctgttcagcc tgaacgcgca ggcgatgctg ccgtgcggga ctcaggctca tggattacgc
     7381 tccggtttct gctgcggcgg cgctgaagtc gccaatctgg atgttttcca ccagtgcggc
     7441 gcagcggtag tcctcaacca cataggcttc gttaacggat tcaaagtttt caatccggtc
     7501 acgtttcggg ttgtcgataa ctgaacggcg gcgagtgtct tcctgccagt agatggacag
     7561 gttatccaga cgggtgatca gcagcgcatt cggcgggaag aacggcgcac gcacggcctg
     7621 caggccaccc atgcgtttct ggctgatgat catatctgca gccagttttt cactgttctc
     7681 ctgctctttg ttgaccagcg ggaaatactt gtcagacaac agttcacgac cgcaaatcac
     7741 caccagatcg tcatcgtcct ggtaaaccac gtcgataagc tcattgacgg catccatcac
     7801 cacggcgtcc aggttggcat attcgccacc tttgccgact ttcactgcgc ccggtgtggt
     7861 ttcaccgccc gtggtggtgc tgcccatgac gtgatccggt gcatcctcac ggattttctg
     7921 cagccagcct ttatttacat cctgcagcag cgggttttcg ctacggttgg aggttttcgc
     7981 acgcttcacg ccgttaaagc cgatcatgat gcggtccagt gcctgacgtt tcacgatggc
     8041 gtcacggata cgcacctgga aatcctgaaa cttcgcccac aggtccagct tcgcgtaggt
     8101 cagcaccgtg tcaaagttgg tctgctcgca tttatattcc acatcgacca tcagcgtcgg
     8161 atcgacaggc tcacgctctt ttgcggtggt atcagtggtt ccggcaatgg tgctgccaac
     8221 acccagcccc agcaactgac cagactgctc agtcactggc gtgacgttaa tcagcgtcag
     8281 gaatgcggcg gattgctgga tctggtcttc cagcgtctgc tgcacagacg gctctacagt
     8341 gaacttgctg gacagttctt caactgccac accgttcaga cgcgccagct gctgcaggta
     8401 agcgttaaaa gcaaagcggg tattcttctt catcgggttt tgtgctccat cagcaattgg
     8461 tcagagtgtc agcgggggcg ttaccgcctg ttgcacgctg gcggtagtcc tggcggctgt
     8521 cttcatgact cagcttgtcc accagttcgt taaaggcggt ttgctgtgcc tgcagggcag
     8581 tctccagctc agacaggcgt tcttcctgct cagacaggga ttgttcggtg cgtgcgctca
     8641 ggttctgctg ctcagtggcg accagctcca cggccttatg catatcagag aaccgggcgt
     8701 catcggactg ctcttttttg gtaaacagcg ccgtgacgcg ggcaaacagg gacggtttgt
     8761 cgtcctggat ttcttccagt tcgatcaccg tttcctctgc agcggtaaag agattggcag
     8821 gattctgctt gcggtttgcc agtgggttat gggctgcact ggcgctgaat gtcagcattt
     8881 ccgtacccag actggcaggg tcatcagtgg cagccaggcc gaccaggtag gctttgcccg
     8941 tatcagcgaa cttcgggctg acttccatag aggtgaataa tttctggcct tttttcacca
     9001 gttccaccag ggactccgtt ggctcaacgt cggcatacag cgccatcttg cctgccagcg
     9061 gaccttccgt gatttcttca gcaaacagcg ccgtcacctt gccgtagcgg ttaaaggtgc
     9121 tgtccggcag ataagacttg atgtgctcaa ggttaatcag cgcggtatac accgccgggt
     9181 tgtagctggc tgccatctgt tccagccatt cacgctggat ttcgcgtccg tcggtggtgg
     9241 caccttccac cccgatgcga aaacgctttg ctttcactgt catgagccgt gctccgttag
     9301 aaaaacttac tggagcctta tggttgcggt gatgggggca gtgaaacaat gcgcggtatt
     9361 tgtaccgaca accacacaaa ccgcaggcgg ggaaagcctt cattcaaggc tgtaggtttg
     9421 tgccatgaac accacactga cacccgcaga tctcgatccc cgtcggcagg ccatgctgct
     9481 gtactttcag ggataccgcg tagcccgcat tgctgaaatg ctgggcgaga aagttgcaac
     9541 cgttcacagc tggaaaaaac gcgacaagtg gggtgattat gggccgctgg atcagatgca
     9601 gctcaccacc gccgcacgct actgccagct cattatgaag gagcacaaag aagggaaaga
     9661 tttcaaagag attgacctgc tggcgcgcca gtcggaacgc cacgcgcgga tcggcaagtt
     9721 taacaatggc ggcaacgaag ccgacttaaa ccctaacgtc gccaaccgca acaaaggccc
     9781 gcgccgtcag ccggaaaaga atgttttcac cgatgaacag attgagaagc tggaagaaat
     9841 cttccattcc tccatgttca actaccagcg ccactggtgg gaagccggaa aaaccaaccg
     9901 catccgcaac ctgctgaagt cacgccagat cggcgcgacc ttctattttg cccgtgaagc
     9961 cctgattgac gccctgctaa ccggacgtaa ccagattttc ctttctgcca gtaaggcaca
    10021 ggcccacgtt ttcaaacagt acatcatcga ctttgccaaa gaggtggagg tggagctgaa
    10081 aggcgatccg atggtgcttc ccaacggggc cacactgtat ttcctcggca ccaatgcccg
    10141 cacggcccag agttaccacg gcaacctgta tctggatgaa tatttctgga taccgaaatt
    10201 tcaggagcta cgcaaagtgg cttccggtat ggctattcac aagaaatggc ggcagaccta
    10261 tttttccaca ccatccagtc tgacccacag tgcttatccg ttctggtccg gtgcgctgtt
    10321 caaccgtggg cgcaacaaag ctgacaaggt ggacatcgac ctgtcccaca gcaatctggc
    10381 ccccggcctg ctgtgcgctg acgggcaata ccgccagatt gtcaccgtgg aagatgcggt
    10441 gcgcggcggc tgtaacctgt tcgatctcga ccagctacgc atggagtaca gcccggacga
    10501 ataccagaac ctgctgatgt gcgagttcgt ggacgatctc gcgtccgtgt tcccgctcag
    10561 cgagctgcag gcgtgcatgg tggacagctg ggaagtctgg accgactttc atgcactggc
    10621 actgcgcccg tttggctggc gcgaagtgtg gatcggttat gacccggcca aaggtacgca
    10681 gaacggcgac agcgccggat gcgtggtggt ggcaccgcca gccgtgccgg gcggcaagtt
    10741 ccgcattctt gagcgtcacc agtggcgcgg gatggacttt cgcgcccagg ctgacgccat
    10801 caaaaaactg actgaacagt acaacgtgac atatatcggc atcgactcga caggtgtcgg
    10861 tcacggggtt tacgagaacg tgaaagcgtt ctttcctgcc gtccgggagt ttgtctacaa
    10921 ccccaacgtt aaaaacgccc tggtactcaa ggcctacgac attatcagcc accgccgtct
    10981 ggagtttgac gccggacaca ccgacatagc gcagtcattt atggcaatcc gtcgcgccac
    11041 caccgccagc ggcaaccgcc cgacctatga agccagccgc agcgaagaag ccagccatgc
    11101 tgatctggcc tgggcaacga tgcatgcact gtttaacgaa ccgctgcagg gcgaatccgc
    11161 caatacaagc aatattgtgg agattttttg atgagaaaga gtaagaagaa ccgcgctgcg
    11221 gcgacgaaac agatccagct taaaagtcaa actacagccg aagcattcag cttcggcgat
    11281 cccgttcctg ttctggaccg ccgagaactg ctggattatg tggaatgcgt acagatggac
    11341 cgctggtatg agccgcccgt cagctttgac ggactggcgc gcaccttccg cgctgccgtg
    11401 catcatagtt ccccgattgc agtaaagtgc aacattctga ccagcaccta catccctcac
    11461 ccgctgctca gccagcaggc tttttcgcgt tttgtgcagg actatctggt atttggtaac
    11521 gcctacctgg agaaacgcac gaaccgcttc ggtgaagtga tcacccttga acctgccctg
    11581 gcgaaataca cccgacgcgg gttagaccta gatacctact ggtttgtgca atacggtatg
    11641 acaacccagc cgtatcagtt cacgaaaggc agcatttttc atctgatgga accggacatc
    11701 aaccaagaga tctacggcct gcccggttat ctttctgcca ttccgtccac cctgctcaac
    11761 gagtccgcca cgctgttccg ccgcaagtat tacattaacg gcagtcatgc tggcttcatc
    11821 atgtacatga ccgacgccgc gcagaaccag gaagatgtga acaacctccg caacgcgatg
    11881 aaaagcgcca aaggtccggg caacttccgc aacctgttta tgtactcgcc gaacggcaaa
    11941 aaggacggac ttcagattat cccgttgtca gaagtcgcgg cgaaggatga atttctgaat
    12001 atcaagaacg tgagccgtga tgacatgatg gctgcgcacc gcgtgccgcc tcagatgatg
    12061 gggattatgc cgaataatgt cgggggattt ggggatgtgg agaaggccgc aaatgtattt
    12121 gtgcgtaatg agttaattcc gcttcaaaga attatacaag gattcaacgg atttattggt
    12181 gacgacatca taaacttcga aaaatataaa ttatagaaaa taggcctgta atcaggccta
    12241 gtatactaac attgtttaca taaatcagaa aaactaccac cgaaataata cagtgcagat
    12301 ttatcattta gttctttaaa aacttcacac gcacgctggt gtatctcaat agcactagat
    12361 ttatttcgcc caataataac agtctctttt tcagtactat cgccatccag aaaagtcttc
    12421 aaaagaaaat taataataaa gtct
//
LOCUS       DAPGWB010000131        12356 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.133, whole genome shotgun sequence.
ACCESSION   DAPGWB010000131 DAPGWB010000000
VERSION     DAPGWB010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12356
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.133"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            115..267
                     /gene="hokA"
                     /locus_tag="RHX79_003533"
     CDS             115..267
                     /gene="hokA"
                     /locus_tag="RHX79_003533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokA"
                     /protein_id="HDV2198663.1"
                     /translation="MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELAAFL
                     ACNLKE"
     gene            complement(455..667)
                     /gene="cspA"
                     /locus_tag="RHX79_003534"
     CDS             complement(455..667)
                     /gene="cspA"
                     /locus_tag="RHX79_003534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone/antiterminator CspA"
                     /protein_id="HDV2198664.1"
                     /translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKS
                     LDEGQKVSFTIESGAKGPAAGNVTSL"
     gene            complement(948..1238)
                     /locus_tag="RHX79_003535"
     CDS             complement(948..1238)
                     /locus_tag="RHX79_003535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator"
                     /protein_id="HDV2198665.1"
                     /translation="MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKG
                     TGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME"
     gene            1672..2382
                     /locus_tag="RHX79_003536"
     CDS             1672..2382
                     /locus_tag="RHX79_003536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3053 domain-containing protein"
                     /protein_id="HDV2198666.1"
                     /translation="MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNT
                     VMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQ
                     DYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTP
                     ADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLP
                     AQHQAFNQAWTTAVTATQ"
     gene            complement(2432..3406)
                     /gene="ghrB"
                     /locus_tag="RHX79_003537"
     CDS             complement(2432..3406)
                     /gene="ghrB"
                     /locus_tag="RHX79_003537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312465.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrB"
                     /protein_id="HDV2198667.1"
                     /translation="MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFA
                     EAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTET
                     VADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMAL
                     AQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLF
                     GAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLS
                     MANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNPHVAD"
     gene            complement(3510..4169)
                     /locus_tag="RHX79_003538"
     CDS             complement(3510..4169)
                     /locus_tag="RHX79_003538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family lipoprotein"
                     /protein_id="HDV2198668.1"
                     /translation="MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSL
                     VGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRS
                     GDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDL
                     NMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP
                     L"
     gene            4322..6655
                     /gene="bisC"
                     /locus_tag="RHX79_003539"
     CDS             4322..6655
                     /gene="bisC"
                     /locus_tag="RHX79_003539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418007.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin sulfoxide reductase"
                     /protein_id="HDV2198669.1"
                     /translation="MANSSSRYSVLTAAHWGPMLVETDGETVFSSHGALATGMENSLQ
                     SAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQHKRIR
                     EAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVV
                     GGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKL
                     ICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLTRCTTGYA
                     VFASYLLGESDGIAKNAEWAAEICGVNAAKIRELAALFHQNTTMLMAGWGMQRQQFGE
                     QKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSSMQGSLPGGCDAVDK
                     IPVARIVEALENPGGAYQHNGMNRHFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPEL
                     VVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRYEARNDF
                     DVFAELSERWEKGGYARFTEGKSQLQWLETFYNVARQRGASQQVELPPFAEFWQANQL
                     IEMPENPDSERFIRFADFCRDPLAHPLKTASGKIEIFSQRIADYGYPDCPGHPMWLEP
                     DEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQARGITE
                     GDMVRVWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTKDL
                     PSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS"
     gene            complement(6624..7064)
                     /locus_tag="RHX79_003540"
     CDS             complement(6624..7064)
                     /locus_tag="RHX79_003540"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDV2198670.1"
                     /translation="MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAY
                     LANAQNWVWEEDGKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRYPHLML
                     EVYQKNQPAIDFYRAQGFHIVDCAWQDETQLPTWIMSWPVVQTL"
     gene            complement(7061..7624)
                     /gene="tag"
                     /locus_tag="RHX79_003541"
     CDS             complement(7061..7624)
                     /gene="tag"
                     /locus_tag="RHX79_003541"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDV2198671.1"
                     /translation="MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGL
                     SWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAY
                     LQMEQNGEPFADFVWSFVNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTT
                     ICYSFMQACGLVNDHVVGCCCYPGNKP"
     gene            7782..8480
                     /locus_tag="RHX79_003542"
     CDS             7782..8480
                     /locus_tag="RHX79_003542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312460.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDV2198672.1"
                     /translation="MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLS
                     TERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQ
                     VTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSSLGWRVDSRLGDLRPWAQI
                     SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALSQAENTTN
                     NSDYLYTMGVSARF"
     gene            8709..9917
                     /locus_tag="RHX79_003543"
     CDS             8709..9917
                     /locus_tag="RHX79_003543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709325.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2198673.1"
                     /translation="MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAP
                     VSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSNNLMML
                     WLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLE
                     TVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWM
                     LAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDK
                     IARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFG
                     LNNLAKNYGVIYLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQ
                     KMLREAHGSL"
     gene            10241..11932
                     /gene="eptB"
                     /locus_tag="RHX79_003544"
     CDS             10241..11932
                     /gene="eptB"
                     /locus_tag="RHX79_003544"
                     /EC_number="2.7.8.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418002.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid A phosphoethanolamine
                     7''-transferase"
                     /protein_id="HDV2198674.1"
                     /translation="MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWK
                     GVSAVVELAATVLVTFFLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYG
                     IIASVMTTDIDLSKEVVGLNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRS
                     LAVVVLAGIMVWAPIRLLDIQQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAW
                     ARVDESSDNNSLLNPAKKFTYQAPQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKL
                     AQEKNLAAFRGYSCDTATKLSLRCMFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDL
                     YAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLI
                     ILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVID
                     QVRDKKAIVFYAADHGESINEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQ
                     AFAQLKKEADMKVPRRHVELYDTIMGCLGYTSPDGGINENNNWCHIPQAKEAAAN"
     gene            12024..12100
                     /locus_tag="RHX79_003545"
     tRNA            12024..12100
                     /locus_tag="RHX79_003545"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12058..12060,aa:Pro,seq:cgg)
     gene            12135..12268
                     /locus_tag="RHX79_003546"
     ncRNA           12135..12268
                     /ncRNA_class="other"
                     /locus_tag="RHX79_003546"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
BASE COUNT         2916 a         3017 c         3203 g         3220 t
ORIGIN      
        1 aaaggcagac aaagaaaagc cccacctgac tataaatcaa agtgaggcta ccctatgcct
       61 gaacaccata aggttagcct cttactcgtt ggaaatcaac acagggggct gggaatgccg
      121 cagaaatata gattactttc tttaatagtg atttgtttca cgcttttatt tttcacctgg
      181 atgataagag attcactgtg tgaattgcat attaaacagg ggagttatga gctggcggca
      241 tttttagcct gcaatttaaa agagtaagag tcttcggcgg gaagttattc ccgcctttct
      301 tacggcgttg cgcattctca ttgcacccaa atttattttt cacaaaaata atactagatt
      361 ttattacgcg atcgattatt tatttcctga aaaacaaata aaaaaatccc cgccaaatgg
      421 cagggatctt agattctgtg cttttaagca gagattacag gctggttacg ttaccagctg
      481 ccgggccttt agcgccgctt tcgatggtga aggacacttt ctgaccttcg tccagagatt
      541 tgtaaccatc gttctggata gcagagaagt gtacgaacac gtctttagag ccatcgtcag
      601 gagtgatgaa gccgaagcct ttgtcagcgt tgaaccattt tacgatacca gtcattttac
      661 cggacatagt gtattacctt taataattaa gtgtgccttt cggcgatatg gcgtgcttta
      721 cagattttga agcgttaaag gaatgtgcac tacgaggggt atcaacgata actcttgaag
      781 ggacttgcct tactacactg ctttaatggt ctgtacgtca aaccgttgat gtgcattaag
      841 ccacgcattg gcgggtgatg caacaattat ttttcatatt tatgattaat cggttggaaa
      901 acggtcctgt catcaggacc gtaaacagca ataaagtgga taaaagtcta ttccatcaac
      961 tgcttactta atgccgggtt ggcttgaatc aaacgcatca attttagttc ggcacttgaa
     1021 ggcttcacgc gtctggattc ccattccttt accatggcga ctgatacgcc caaaacccgg
     1081 gcgaaatcat cgatttttaa ccctgtccct tttcgtaact gctcaatttc ggtacaggac
     1141 gttgttctgt gcgtcagggt aattttctgc gtttcatctt taaaaacaat ctgttccagg
     1201 ctgctcaaca gctcatgcat tggatcttta tattccattg aaaactcctc aaatcacact
     1261 gcgggatcgt gaattgcatc gaagctcatt aagaatagtc gggaaaagca gacacagcgg
     1321 ggtgaagtca gggcatgctc tggctatgat tcgattcagc cagtcattta gcgtgactta
     1381 tagccaccta acgatctgat aaatgccgat atatctctta ccactcctgg tttgtaaaga
     1441 tttcgaaaat ctaaccttct gcgaaggcgt aaatctctgg ctacaaaaaa agcaacggca
     1501 ctatcatttt ttaacaatga aacaacaaat taaccttgtt tcattttctc catgatttta
     1561 ccaggaagat tacgtagaaa gggtatcctg caagcctgtc ctggactatc cttgtcacgt
     1621 cagacacgcg tgtgtcgttg tgcgcttttt ttgggtgaaa ggagtaagaa aatggcgaca
     1681 ggaaagtcct gctctcgctg gtttgcgcct cttgcggcgt tattaatggt agttagcctg
     1741 agtgggtgtt ttgataaaga aggcgatcag cgtaaagcgt ttatcgactt cctgcagaat
     1801 acagtgatgc gtagcggtga acgtctacca accctgactg ccgatcagaa aaaacagttt
     1861 ggtccttttg tctctgatta cgcgattctg tatggttatt ctcagcaggt gaatcaggcg
     1921 atggattccg gtctgcgccc ggtcgtagac agcgttaacg caattcgcgt accgcaggat
     1981 tacgttacgc aaagcggtcc gctgcgtgaa atgaacggtt cgctgggtgt gctggcgcaa
     2041 caactgcaaa atgcgaagtt gcaggccgat gctgcgcact ctgcgctaaa acagaccgat
     2101 gatttgaaac cggtctttga tcaggcattc accaaagtgg taacgacgcc agctgatgca
     2161 ttgcaaccgt tgattccggc tgcacaaact ttcacgcaac aactggtgat ggttggagac
     2221 tacattgctc agcaaggtac tcaggtgagc tttgtcgcaa atggcatcca gttcccgact
     2281 tcacagcagg caagtgaata taacaaactg attgcgccat taccggcaca acatcaggcg
     2341 tttaatcagg cctggactac agcagttact gcaacccaat aaagagtaaa agcccgagcg
     2401 attatcgggc tttacttcac gcagtcgcgg cttagtccgc gacgtgcgga ttcacacagt
     2461 tcttctcaac ctttccttgt aacgcatcaa tcaaattatc cacggcacag gcggccatgc
     2521 cataacgcgt ctcatgggtg gcagatccaa tatgcggtac tgcgacgacg ttggccattg
     2581 agagcaacgg cgaatctacg gacagtggct cttgttcgaa gacatccagc ccggcggcgt
     2641 gaatttcgcc tttctgcaat gcagcaatca gtgcattttc atcaaccacc gggccacgtc
     2701 cggcattaat gaaaatggcg gaggatttca ttttggcgaa ttgttctgcg ccaaacagat
     2761 gatgcgtctc atcagttaac ggcaggatca ggcaaacgaa atctgactct tgtaacagag
     2821 tatccaaatc gcagtagcgg gcgttgaagc gttcttctgc ttctttatgg tggcggcgcg
     2881 cgttatagag gatgggcatg ttgaagccaa agtgcgcacg ttgtgccagc gccataccga
     2941 tccgtcccat cccgacaatg cccagtgttt tatggtgaac gtcagtgccg taccagtccg
     3001 ggcctatgct cgcggtccat tcgcctgctt ttacccgttc tgctacctcc acaacccgac
     3061 gagcggtaga caacaccagc gccatcagcg tatcggcgac ggtttctgtt aatacggttg
     3121 gcgtgtgcat cagcagaatt tttcgggcgg taagcgcatc gacatcaaaa ttgtcatagc
     3181 cgacggagat cgttgatgtg gcacgcagtt tcggcatttt ttccagcaat gcggcatcaa
     3241 cattctcgtt tgaacccagt aaaccttcag cttcggcaaa aattgctgca ttttgttcga
     3301 cggtttgtgg gctgaggttt gccacctggt gaacggtgaa atgctcttgc aggcgttgca
     3361 gtaaatcatc aggtaaggct ttgtagagga taacggacgg cttcatgctt ctctccattc
     3421 actgataagg cgatcacctt agcctgaaat atgatgaagg aaaactgaag aatgccaggt
     3481 gatttctgca tcacctggca tgaaagggat tacagcgggc ttaaggtaat ttctacacgg
     3541 cggttttgcg ccttaccttc tgcggtgctg ttgctggcga ttgggttagc cgggccaagg
     3601 ccctgagtac ggatgcggct ggcgtccacg ccctgggtga tcaacgcgct ggcaacggaa
     3661 tccgcacgtt gctgggagag acgcatgttc aggtcgtgac cacccgtgct gtcggtataa
     3721 ccaatcacgt taaccgccgt tttcggatac tctttcagca ccattgccac gccggtcagg
     3781 gtgttagcgc ccgcaggttt cagggtcgcg ctgctgctgt cgaaggtcac attgttcggc
     3841 atattgagga taatgttatc cccgctgcgg gttacgctaa caccagtgcc gcgcattttg
     3901 tcacgcagct tcgcttcctg cacatccatg taataaccca cgccgccgcc cagagctgcg
     3961 cctgctgctg cgccaatcag cgcgccttta ccgcgatctt tcttcgaaga agagagcgca
     4021 ccaatacccg cgcccacgag agagcccaga cctgcgccga tagcagattt acctgcttcg
     4081 cgttcgccgg tgtaagggtt agttgtgcag ccagataccg ccagagcgcc actcactacg
     4141 gcggcaataa gataaacacg tttcttcatt gttaatcctt aataaccttt ttattctttg
     4201 ccacgggttc cgtggcggga gattatgccg cgtgaacatg aagattattc ctgggaatac
     4261 tcggaaattt gtaagtaata tttaactgct caatacatct aacctttcag gagttttcgg
     4321 tttggccaac tcatcctcac gatattccgt tctgactgcc gcccattggg ggcccatgct
     4381 ggttgaaacc gacggcgaaa ccgtgtttag ctcgcatggc gcgttagcca caggaatgga
     4441 aaactccttg cagagcgcgg ttcgcgacca ggttcacagc aatacacggg tacgatttcc
     4501 aatggtgcgc aaaggctttc ttgcgtcacc ggaaaatccg caaggcattc gtgggcagga
     4561 tgaatttgtt cgcgtgagtt gggatgaggc gctggatctt attcaccaac aacataaacg
     4621 cattcgtgag gcttatggtc cggcatcgat ttttgctggt tcctacggct ggcgttcaaa
     4681 cggcgtgctg cataaggcct cgacattatt acaacgctat atggcgctgg caggcggtta
     4741 taccgggcat ctgggggatt attcgaccgg cgcggcacag gcgatcatgc cgtatgtcgt
     4801 gggtggtagc gaagtttatc aacagcaaac cagttggccg ctggtgctgg aacatagcga
     4861 tgtcgtggtg ttgtggagtg ctaacccact caatacgctg aaaattgcgt ggaatgcatc
     4921 tgatgagcag gggctttctt acttttccgc actgcgtgac agcgggaaaa agctgatctg
     4981 tattgatcca atgcgatcgg aaaccgtcga tttctttggc gataaaatgg agtgggtggc
     5041 accgcacatg ggcaccgatg ttgcgctgat gctggggatc gcccatacgc tggtggaaaa
     5101 tggttggcac gacgaagcgt ttctgacgcg ttgcaccaca ggttatgccg tcttcgcctc
     5161 ttatttgctg ggcgagagtg acggaatagc gaaaaacgcc gaatgggcgg cagagatttg
     5221 tggggttaac gcagcgaaaa tccgcgagct ggcggctctt ttccaccaaa acacgaccat
     5281 gctgatggct ggctggggaa tgcagcgcca acagtttggt gagcaaaaac actggatgat
     5341 cgtcacgctg gcggcaatgt tggggcaaat cggcacaccc ggcggcggtt ttggtctttc
     5401 ttatcatttt gccaatggtg gtaaccccac gcggcgttct gcggtgctct cttccatgca
     5461 gggcagcttg ccgggtggct gcgatgcggt ggataaaatc cctgttgccc gcattgttga
     5521 agcactggaa aaccctggtg gcgcatatca acacaacggt atgaaccgac atttcccgga
     5581 tattcgtttt atctggtggg cgggcggtgc caactttact catcatcagg ataccaatcg
     5641 tctgatccgt gcctggcaaa aaccggagct ggtggtgatc tctgaatgct tctggacggc
     5701 ggcggcgaaa cacgcggata tcgttctgcc tgcgactacc tcttttgagc gtaatgatct
     5761 caccatgacc ggtgattaca gtaatcagca tctggtgccg atgaagcaag tggtgccgcc
     5821 acgctatgaa gcgcgtaatg attttgatgt ttttgccgag ttgagtgaac gttgggagaa
     5881 gggcggctat gcgcggttta cggaaggaaa aagtcagctg caatggctgg aaacgtttta
     5941 taacgttgcc cggcagcgcg gggcaagcca gcaggttgaa ttgccgccat ttgctgagtt
     6001 ctggcaagcc aaccagttaa ttgagatgcc ggaaaacccg gacagcgagc ggtttattcg
     6061 cttcgctgat ttttgccgcg atccgctggc gcatccgtta aaaaccgcca gcggcaagat
     6121 tgaaatcttc tcacagcgta ttgccgatta cggttacccg gattgccctg ggcatccaat
     6181 gtggctggag ccggacgaat ggcagggcaa tgccgaacca gaacagttgc aggtactttc
     6241 tgcccatccg gcgcaccgcc tgcacagcca gctgaattac agttctctgc gcgaattgta
     6301 cgcggtagca aaccgtgagc ctgtcaccat tcatcctgac gatgctcagg cgcgcggcat
     6361 aaccgaaggg gatatggtgc gggtgtggaa ctcccgtggg cagatccttg ccggagcggt
     6421 cattagcgag ggaattaaac ctggcgtgat ttgcattcac gaaggggcat ggccggatct
     6481 ggatttaacc gctgacggta tttgtaaaaa cggcgcagtg aacgtgctga ccaaagatct
     6541 ccccagctcg cggctgggga atggctgtgc gggtaatacg gcgctggcat ggctggaaaa
     6601 atacaacggt ccggaactga cacttacagc gtttgaacca ccggccagct cataatccag
     6661 gtgggtagtt gggtttcatc ctgccatgcg caatcgacaa tgtgaaaacc ctgcgcacgg
     6721 taaaaatcta tcgccggttg atttttttga taaacctcca gcatcagatg gggatagcgc
     6781 tgctgcacat actgcatcag cgccttacca ataccgcgtc tgacggcctt cggtgcgaca
     6841 aacattgctg ccagaaatcg gccttccata atgctgacaa aaccgagaag cttaccgtcc
     6901 tcttcccaga cccagttttg cgcgttggca agataggcat cccgcaccag cggaatgcag
     6961 tcacgccagt aattcgcttt tataaaggga tgcccccagg ttgtactttc cagccacagt
     7021 tcgaggatcg cggggagttc tgaacgttgc gcttcccgaa tcatggttta tttcccggat
     7081 agcaacagca gccaaccaca tgatcattca ccagcccaca tgcctgcata aaggagtaac
     7141 agattgtggt gccgacaaac ttaaaaccac gttttttcag tgccttagat agggcgtcgg
     7201 aggcggacgt agatgtggga atttcgctca acgttgtggc ttgtgtcacc tgtggctgat
     7261 gatttacaaa cgaccagaca aagtcggcaa acggttcgcc gttctgttcc atttgcaggt
     7321 acgcgcgcgc attaccaata attgcctgaa ttttccctcg atggcggata atcccggcgt
     7381 cctgtaccag tctttcgaca tcctcttcct gcattgctgc gaccttcacc ggatcgaact
     7441 gatgaaagca ggcgcgatag ttttcgcgtt ttttgaggac ggtgatccac gataacccag
     7501 cctgctgccc ttcaaggcag atcatttcga acagtttttt actgtcagtt tcaggcacgc
     7561 cccattcatt atcatggtag gcaatataaa gcgggtcctg actcacccag ccgcaacgtt
     7621 ccatactttc cctcgctatg tacccgatcg taaaaatttc agccgctttt cttgacgcat
     7681 cggtgaaaaa gtcaatattt aatacagggc tactatgccc gatatccttc atacaatgac
     7741 aataatattg ccgaattcgg ctcttccctg gagtcgtgtt aatgatcata aaaaaaagcg
     7801 gtggtcgctg gcagctaagc ctgctggcga gcgtggtaat tagtgccttt tttctcaaca
     7861 cagcttacgc ctggcaacaa gaatatatcg ttgatacgca acccggactt tccacagagc
     7921 gttacacctg ggatagtgat catcaacctg attacaacga tattttgtcg caacgtattc
     7981 aaagtagcca aagggcgctg ggactggaag tcaatctggc ggaagaaacc cctgtggatg
     8041 tgaccagcag tatgagtatg ggctggaatt ttcctttata tgaacaggtt acaaccggcc
     8101 cggtcgcggc attacattac gatggcacaa ccacctcgat gtataacgag tttggcgaca
     8161 gtactaccac gctgaccgat ccgttatggc atgccagcgt gagtagctta ggctggcgtg
     8221 ttgactcccg gcttggcgat ctccgaccct gggcgcaaat cagctataac cagcaatttg
     8281 gcgagaatat ctggaaggcg caatcaggcc tgagccggat gacggcgaca aaccagaacg
     8341 gcaactggct ggatgtcacc gtaggcgctg atatgttgct caatcaaaat attgccgcct
     8401 atgccgcgct atctcaggca gaaaatacca ctaacaatag cgactatctg tatacgatgg
     8461 gggttagtgc cagattttaa cgtaaaaatc acaattgaaa ccattggata acaacagttg
     8521 tggcgatagt gggtgctaac ttactaaata ataaatttgg tgaataattg tcgcgtcatt
     8581 cattcctgaa ctaaggcatt tcattccgtt ctgatggcat ttcatgccgt ttttccccag
     8641 gcataaaatg cacttcgtta tggttgtcgg cagagatttt tcctttttat tactgcagga
     8701 atactgccat gacaccttca aattatcagc gtacccgctg gctgacactc atcggtacta
     8761 tcattaccca gtttgcactg gggtcggttt atacctggag cctgtttaat ggcgcgcttt
     8821 ctgccaagct ggatgcgccg gtaagccagg tcgctttctc tttcggcttg ttaagtctgg
     8881 ggctggcaat ttcgtcttct gttgcgggaa aattgcagga acgttttggc gttaaacgcg
     8941 tcaccatggc ttccggcatt ttgctgggat taggcttctt cctgaccgcg cattccaaca
     9001 acctgatgat gctgtggtta agcgccggtg tgctggtcgg tctggcggat ggcgcgggtt
     9061 acctgctgac gctctctaac tgcgtgaagt ggttcccgga gcgtaaaggt ctgatatccg
     9121 cgttcgctat cggttcttat ggtctgggta gcctgggttt caaatttatc gacacgcagc
     9181 tgctggaaac ggtgggtctg gaaaaaacct ttgtgatttg gggagcgatt gcgctggtga
     9241 tgattgtttt cggcgcaacg ttaatgaaag acgcaccaaa acaggaagtg aaaaccagca
     9301 atggcgtagt ggagaaagat tacacgctgg cagagtcgat gcgtaaaccg cagtactgga
     9361 tgttagcggt aatgttcctg actgcctgca tgagtggcct gtacgtgatt ggggtagcga
     9421 aagatatcgc ccaaagtctg gcacaccttg atgtggtttc cgcagccaat gcagtaacgg
     9481 ttatttccat cgctaacctt tcaggtcgtc tggtgctggg cattctgtct gacaaaattg
     9541 cccgtatccg tgttatcacc attggtcagg tgatttcgct ggtgggtatg gcggccctgc
     9601 tgtttgcacc attaaatgca gtgacgttct ttgcagcgat tgcctgcgtg gcatttaact
     9661 ttggcggcac tattaccgtc tttccatcac tggtcagtga gttcttcggc ctcaataacc
     9721 tggcgaaaaa ctacggtgtg atttacctcg gtttcggtat cggtagcatt tttggttcga
     9781 ttatcgcctc actgtttggc ggtttctatg tgaccttcta cgtgattttc gccctgctga
     9841 ttctgtcatt ggcgctttct acgacgattc gtcagccaga gcagaaaatg ttgcgtgagg
     9901 cgcatggctc cctttaatgc tcagccgcga gctactgggc ttcagcttcc gtgtgcatca
     9961 aacgcatcaa cgaaatgtat aaacaatgac tcgtaaaatt tgggccagtt aactggccct
    10021 ttttactgct ttttgtaacg ctaaagtctc ttttcaaact tgcatttttg taaatttgtg
    10081 cttcatgcac actctttccc cacacttttt cgctttgctg tggtctactt attcgcgcgt
    10141 gtagatttta cttatctgac tacctccgca cttttcccct gccgggcctg aaaagccgct
    10201 aagcagggtg ttatcacctg tttgtccagg gtttgtttgc atgagataca tcaaatcgat
    10261 tacacagcag aagctgagct ttttgcttgc aatctatatt ggccttttta tgaatggcgc
    10321 ggttttttat cgccgcttcg gcagctatgc gcacgatttt accgtctgga aaggcgtttc
    10381 tgctgttgtt gaactggccg ccaccgtact ggtgaccttc tttttactac gtcttctatc
    10441 gctgtttggc cgccgcagct ggcgtattct ggcgtcgctg gtggtgctct tttccgcagg
    10501 tgccagctat tacatgacct tccttaatgt ggtcattggt tatggcatca tcgcttccgt
    10561 catgaccacc gatatcgacc tgtcaaaaga agttgttggt ctgaacttta ttctctggtt
    10621 aatcgccgtt agtgcattgc ctcttatcct tatctggaat aaccgctgtc gctacacctt
    10681 gctccgacaa ctgcgaaccc cagggcagcg tattcgcagc ctggcggtcg tcgtactggc
    10741 gggtattatg gtttgggcac cgattcgttt gctggatatc cagcagaaga aagtggagag
    10801 ggcgaccggc gttgatttgc cgagttatgg cggtgtcgta gcgaactctt atctgccatc
    10861 aaactggctt tctgcgttgg ggctgtatgc ctgggcgcgg gtcgatgaat cttccgataa
    10921 taattcattg cttaatccgg cgaagaaatt cacttatcag gcaccgcaaa acgttgatga
    10981 cacttatgtc gtgtttatca tcggtgaaac cacgcgttgg gaccatatgg gtattttcgg
    11041 ctatgagcgt aataccacgc cgaaactggc ccaggagaaa aatctggcgg cgttccgtgg
    11101 ttactcctgt gataccgcaa ccaaactctc actgcgttgc atgtttgtac gtcagggggg
    11161 cgcggaagat aatccgcagc gcacattaaa agaacagaac attttcgcgg ttctgaagca
    11221 gttaggattc agttctgacc tctacgctat gcagagcgaa atgtggttct acagcaacac
    11281 gatggcggac aacattgctt atcgtgagca gattggtgcg gagccacgta atcgtggcaa
    11341 gccggtagat gatatgttgc tggtagacga aatgcagcaa tcgctagggc gcaacccgga
    11401 tggtaagcat ctgatcattc tgcataccaa aggttcgcat tttaactaca cccagcgtta
    11461 tccgcgtagc ttcgcgcagt ggaagccgga atgtattggt gttgatagcg gctgtaccaa
    11521 agcgcagatg atcaactcct atgacaactc ggtgacctat gtggatcact ttatctccag
    11581 cgtgattgat caggttcgcg ataagaaagc gattgtgttc tacgcagctg accacggtga
    11641 gtcaattaat gaacgcgagc acctgcacgg cacgccgcgt gaactggcac cgccggagca
    11701 gttccgcgta ccgatgatgg tctggatgtc agataaatat ctggaaaatc cggccaatgc
    11761 gcaggcgttt gcgcagctga aaaaagaagc cgacatgaaa gtgccacgcc gtcacgtaga
    11821 gctgtacgac accatcatgg gttgtcttgg ctatacttca ccggatggtg gaattaacga
    11881 aaacaacaac tggtgtcaca tcccgcaggc aaaagaggca gcggctaact aagcggcctg
    11941 ctgactttct cgccgatcaa aaggcatttt gctattaagg gattgacgag ggcgtatctg
    12001 cgcagtaaga tgcgccccgc attcggtgat tggcgcagcc tggtagcgca cttcgttcgg
    12061 gacgaagggg tcggaggttc gaatcctcta tcaccgacca aattcgaaaa gcctgctcaa
    12121 cgagcaggct tttttgcatc tgcagctcat gaggatgaga acctccgggg gcggggaggt
    12181 tcgactcgag cgaagcgaga gaacgttgcg ccagcaacgg cccgcagggc gagccacgaa
    12241 gtggcgagta atcctctatc accgaccaaa ttcgaaaagc ctgctcagcg agcaggcttt
    12301 tttgcatttg aagcccatga ggatgagaac ctccgggggc tgggaggttc gactcg
//
LOCUS       DAPGWB010000132        12150 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.134, whole genome shotgun sequence.
ACCESSION   DAPGWB010000132 DAPGWB010000000
VERSION     DAPGWB010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12150
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.134"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            254..1024
                     /locus_tag="RHX79_003547"
     CDS             254..1024
                     /locus_tag="RHX79_003547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HDV2198675.1"
                     /translation="MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMD
                     SVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGV
                     EKRFSQIQPLRYPRWLVALMVGLSCACFCKLNNGGWDGAVITFFASTAAMYIRQLLAQ
                     RHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMF
                     KGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV"
     gene            1015..1488
                     /locus_tag="RHX79_003548"
     CDS             1015..1488
                     /locus_tag="RHX79_003548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418783.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter"
                     /protein_id="HDV2198676.1"
                     /translation="MGVIEFLFALAQDMILAAIPAVGFAMVFNVPVRALRWCALLGAI
                     GHGSRMILMTSGLNIEWSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISA
                     YTAMISAVKISQLGYSESLMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV"
     gene            1596..2135
                     /gene="dnaT"
                     /locus_tag="RHX79_003549"
     CDS             1596..2135
                     /gene="dnaT"
                     /locus_tag="RHX79_003549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaT"
                     /protein_id="HDV2198677.1"
                     /translation="MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYA
                     VTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFI
                     RLAALWGVALREPVTTEELTSFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPK
                     RDVNTVSEPDSQIPPGFRG"
     gene            2138..2875
                     /gene="dnaC"
                     /locus_tag="RHX79_003550"
     CDS             2138..2875
                     /gene="dnaC"
                     /locus_tag="RHX79_003550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein DnaC"
                     /protein_id="HDV2198678.1"
                     /translation="MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAAL
                     ERENRAMKMQRTFNRSGIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASF
                     IFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDL
                     SNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVM
                     DRMRLGNSLWVIFNWDSYRSRVTGKEY"
     gene            2924..3418
                     /locus_tag="RHX79_003551"
     CDS             2924..3418
                     /locus_tag="RHX79_003551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418780.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2501 domain-containing protein"
                     /protein_id="HDV2198679.1"
                     /translation="MMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNS
                     TTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQMLE
                     KLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGL
                     NFIS"
     gene            3672..5963
                     /gene="opgB"
                     /locus_tag="RHX79_003552"
     CDS             3672..5963
                     /gene="opgB"
                     /locus_tag="RHX79_003552"
                     /EC_number="2.7.8.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerol--membrane-oligosaccharide
                     glycerophosphotransferase"
                     /protein_id="HDV2198680.1"
                     /translation="MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNIT
                     LFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRRRR
                     HHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDP
                     KLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVAS
                     QCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKS
                     HGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVD
                     THHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAAFINKIKASPWFKDTVIVVS
                     SDHLAMNNTAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNY
                     LGLGRSSLSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGS
                     HFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLWAPELA
                     LSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRY
                     KADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITA
                     KAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNPTDADTLVIVPPEPVSTNEGN
                     ILGHSPRKLGIGMVEIKVVEREG"
     gene            complement(6103..7125)
                     /gene="lgoD"
                     /locus_tag="RHX79_003553"
     CDS             complement(6103..7125)
                     /gene="lgoD"
                     /locus_tag="RHX79_003553"
                     /EC_number="1.1.1.414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-galactonate oxidoreductase"
                     /protein_id="HDV2198681.1"
                     /translation="MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDI
                     HAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKNGQQVAVIPYVACQQCPACKSGR
                     TNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAI
                     APGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDF
                     DAQLRAQFGGSLAQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHK
                     KETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELI
                     KGVITF"
     gene            7264..8178
                     /locus_tag="RHX79_003554"
     CDS             7264..8178
                     /locus_tag="RHX79_003554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313344.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDV2198682.1"
                     /translation="MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTT
                     VRHILSHLRECGVLTQVGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMINQR
                     QLRPGETFSELQLARAAGVSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQL
                     FELREMLETHSLQHFLNLPDHDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHS
                     LLLSAADNIFFDQSLEIISVIFHFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLD
                     ATLALRNHLNSAKQSMIRSINENTRYAH"
     gene            8393..9754
                     /locus_tag="RHX79_003555"
     CDS             8393..9754
                     /locus_tag="RHX79_003555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2198683.1"
                     /translation="MEKENITLDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAM
                     LLLFFAAVINYLDRSSLSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLD
                     RKGPRLMLGLGMFFWSLFQAMSGMVHSFTQFVLVRIGMGIGEAPMNPCGVKVINDWFN
                     IKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYR
                     NREHVELTAVEQAYLNAGSVNARRDPLSFAEWRSLFRNRTMWGMMLGFSGINYTAWLY
                     LAWLPGYLQTAYNLDLKSTGLMAAIPFLFGAAGMLVNGYVTDWLVKGGMAPIKSRKIC
                     IIAGMFCSAAFTLVVPQATTSMTAVLLIGMALFCIHFAGTSCWGLIHVAVASRMTASV
                     GSIQNFASFICASFAPIITGFIVDTTHSFRLALIICGCVTAAGALAYIFLVRQPINDP
                     RKD"
     gene            complement(9803..11467)
                     /gene="tsr"
                     /locus_tag="RHX79_003556"
     CDS             complement(9803..11467)
                     /gene="tsr"
                     /locus_tag="RHX79_003556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDV2198684.1"
                     /translation="MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQ
                     TIRQQQSTLNGSWVALLQTRNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAE
                     KNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQ
                     DGFEKQYVAYMEQNDRLYDIAVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASL
                     VAPMNRLIDSIRHIAGGDLVKPIEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANA
                     IYSGASEIATGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSAS
                     ETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQ
                     GRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVT
                     RVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNAALVEESAAAAAALEEQASRL
                     TEAVAVFRIQQQQQQQRETSAVVKTVTPATPRKMAVADSGENWETF"
     gene            complement(11586..12032)
                     /gene="hpaR"
                     /locus_tag="RHX79_003557"
     CDS             complement(11586..12032)
                     /gene="hpaR"
                     /locus_tag="RHX79_003557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoprotocatechuate degradation operon regulator
                     HpaR"
                     /protein_id="HDV2198685.1"
                     /translation="MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESP
                     SMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKPINDQRKLYISLTKEGQALYNRA
                     QTQIEEAYRQIEAQFTAEKMQQLTHLLEEFIALGNSRQEDIPGDNE"
BASE COUNT         2955 a         3207 c         2946 g         3042 t
ORIGIN      
        1 aaaaacgtgc ccggttatct attatcctga ttcgtaaagg ccaaacaata aattcattat
       61 gatgataata ttcatgtgat agtttgtttg cggcgagaga taattcgctt tttatcaccg
      121 agcttctccc gataaccagg attaatcagc gcaattttga tcttaaccta ccgcaaaaca
      181 accgtgcttc atgatacaaa tggattctca ttatctgaac aatacgcagc acgtctatga
      241 caaagggcga gttatgcaaa ctgagcaaca gcgagccgta acacggcttt gtatccagtg
      301 tggattattt cttctgcaac atggtgcgga aagcgcgttg gttgatgagc tttcctcacg
      361 actgggtcgg gcgctgggaa tggacagcgt tgaaagttct atctcttcga acgccatagt
      421 gctgacaacc attaaagatg ggcaatgcct gacatcgaca cgtaaaaatc acgatcgcgg
      481 cattaatatg catgtggtga ctgaagtcca gcacattgtg attctggcgg agcaccatct
      541 gctggattac aaaggcgtag aaaaacgatt tagccaaatt cagccattac gttacccaag
      601 atggctggta gccttaatgg ttggcctttc ttgcgcctgt ttctgtaaac tcaataacgg
      661 tggctgggat ggtgccgtca tcaccttctt tgccagtacg gccgcgatgt atatccgcca
      721 gctgctggca caacgtcatc ttcatccaca gatcaacttt tgccttaccg ctttcgccgc
      781 caccaccatt tccggattgc ttttgcaact ccccactttc agcaataccc ccaccattgc
      841 gatggccgcc agcgttctgc tgctggtgcc gggctttccg ttgattaatg ccgtcgccga
      901 tatgtttaaa ggccacatca ataccggact ggcacgctgg gcgatcgcca gtctgctgac
      961 actggctacc tgcgtcggcg tggtgatggc actgacgatt tgggggctac gcggatgggt
     1021 gtgatcgagt ttctgtttgc attggcgcag gatatgatcc tcgccgccat tccagcggtc
     1081 ggctttgcga tggtgttcaa cgttcccgtt cgggcattac gctggtgtgc gctgcttggc
     1141 gcgattggtc atggttcacg aatgatctta atgaccagcg ggctgaatat tgagtggtca
     1201 acctttatgg cttctatgct ggtcggcacc attggtattc aatggtcgcg ctggtatctg
     1261 gcacatccga aagtgtttac cgtggcggct gttatcccta tgttccctgg catatcggct
     1321 tataccgcaa tgatttcggc cgtaaaaatc agccagttag gttacagcga gtcattgatg
     1381 attaccctgt taaccaattt tcttacagct tcatcgattg ttggtgcgtt atccatcggt
     1441 ctttccatcc ctggattatg gttgtaccgc aagcgccctc gcgtataaaa ttgcctcgct
     1501 taaagcacgc ggatgagaga cagccacctc tcctccgtgt gttactataa aagttatctc
     1561 ccttctcgtt catcgttcca tatttgagaa acagtatgtc ttccagagtt ttgaccccgg
     1621 acgtcgttgg tattgacgcc ctggtacacg atcaccaaac cgttctggca aaagctgaag
     1681 gcggtgtggt tgccgtattt gctaacaatg ccccggcgtt ttatgccgtc acgcctgcac
     1741 gcctggctga actgctggcg ctggaagaaa agctggcgcg tccgggaagc gatgtcgctc
     1801 tggacgatca actctatcag gaaccgcaag ctgctcccgt tgctgtaccc atggggaaat
     1861 tcgccatgta tccggactgg caacccgatg ccgactttat ccgcctggcg gcgctatggg
     1921 gcgtggcact aagagagccg gtgaccaccg aagaactgac ctcattcatt gcctactggc
     1981 aggcggaagg taaagtcttt caccatgtac agtggcaaca aaaactggcg cgcagcctgc
     2041 aaatcggtcg tgccagcaac ggcggactgc cgaaacgaga tgtgaatacg gtcagtgaac
     2101 ctgacagcca aattccacca ggattcagag ggtaacgatg aaaaacgttg gcgacctgat
     2161 gcaacgcctg caaaaaatga tgcctgccca tatcaaaccc gcattcaaaa cgggtgaaga
     2221 actactggcc tggcaaaaag aacaaggggc gatccgctcc gccgctctcg aacgtgaaaa
     2281 tcgggcgatg aaaatgcagc gcacctttaa ccgctccggt attcgtccac tgcatcagaa
     2341 ctgctccttt gagaactatc gcgttgagtg tgaagggcag atgaatgcgt taagcaaagc
     2401 gcgccagtat gtcgaagagt ttgacggcaa catcgccagc tttatctttt ctggtaagcc
     2461 aggaaccggc aaaaaccatc tggcggcggc aatctgcaac gagctgctgc tacgcggtaa
     2521 atccgtattg atcatcaccg tggccgatat tatgtcggcg atgaaagata ccttcaggaa
     2581 tagcggtacc agtgaagaac aactgcttaa cgatctgagc aacgttgatc tgctggtgat
     2641 cgatgagatc ggcgtgcaga ccgaatcgaa atacgaaaaa gtgatcatca accagatcgt
     2701 cgatcgccgc tcttcttcca aacgcccaac cgggatgctg accaacagta atatggaaga
     2761 gatgaccaag ttgctgggcg aacgcgtgat ggaccgtatg cgcctgggta acagtttgtg
     2821 ggtgatcttc aactgggata gctaccgtag ccgggtaaca ggtaaagagt attaatcccc
     2881 gtttctggcg gtatactccg acacaattcc accttgagta atgatgatga aaactgttaa
     2941 acatcttctg tgctgtgcca ttgccgccag cgcattaatt tccaccgggg tgcatgctgc
     3001 gtcctggaaa gatgcgctct ccagcgccgc cagcgaactt ggcaaccaaa acagtacgac
     3061 acaggaaggc ggttggtcgc tcgcgtcatt aactaacttg cttagcagcg gaaaccaggc
     3121 cttaagcgca gataacatga acaatgccgc aggcattctg caatactgcg cgaagcaaaa
     3181 gctggcttcg gtaaccgatg ccgaaaacat caagaaccag atgctggaaa agctgggcct
     3241 gaacagtgaa gagcaaaaag aagacaccaa ctatctggac ggcattcagg gtttgctgaa
     3301 aaccaaagat ggtcagcaac tcaatctgga taacatcgga acgactccgc tggcagaaaa
     3361 ggtgaaaacc aaagcctgcg atctggtgtt aaagcagggg ctgaacttca tttcctgaac
     3421 cgcgaaacgc cgcgttttag ctgttacccg gctgacgcgg ctctctcctg cccttttccc
     3481 tgctcctgga cggttttccc cctgttacac gggaagcgac cgcgatcaaa aaagtctgtt
     3541 tataaactaa ttcctaacaa catcgcattt ttttgacact agaattgcag caatatggcg
     3601 acgccattac attgtgcttc tcaaaaagct taaacgttgg ctaaacggcc cggtttagtg
     3661 aggatcgccc gttgtcagaa ctactctctt tcgccctttt tctcgcctct gtgctgattt
     3721 acgcatggaa agcgggacgt aacacctggt ggtttgcagc cacattaacg gtgctggggc
     3781 tatttgtcgt tttaaatatc accctgtttg ccagcgacta ttttactggc gatggtatta
     3841 acgacgcggt tctctatacc ttaaccaaca gcctgaccgg tgctggcgtc agcaaataca
     3901 tcctgccggg tatcggcatt gtgctggggc tgacagcggt gttcggtgcg ctgggctgga
     3961 tcctgcgccg tcgtcgccat catccgcacc attttggtta cagcctgctg gcgctcttac
     4021 tggcgctggg ttcggtggac gccagcccgg catttcgtca gataacggaa ctggtgaaat
     4081 cccagtcacg cgatggcgac ccggactttg cggcttatta taaagagccg tcgaaaacta
     4141 tccctgaccc gaaactcaac ctggtttata tctacggcga aagtctcgag cggacctatt
     4201 ttgataacga agctttcccg gatctcacgc ctgaactggg cgcgttgaaa aatgaaggcc
     4261 tggatttcag ccacacgcag cagctgccag gaacggatta cacgattgcg ggcatggtgg
     4321 cttctcagtg cggcataccg ctgtttgccc cctttgaagg caacgcctcc gcctctgtct
     4381 ccagcttctt cccgcagaac atctgtctgg gcgatatcct gaaaaactcg ggttatcaga
     4441 actatttcgt gcagggcgcg aatctgcgtt ttgccggtaa agatgtgttc ctgaagtcgc
     4501 atggcttcga ccacttatac ggctcagaag agctgaaaag cgtggtggcc gacccgcact
     4561 atcgcaacga ctggggattc tacgacgata ccgttctcga tgaagcgtgg aaaaagtttg
     4621 aagagctttc ccgctcaggt cagcgattct cactgtttac cctgacagtc gatacccatc
     4681 acccggatgg ttttatctcg cgtacctgta accgcaaaaa atatgatttt gacggtaagc
     4741 cgaaccagtc attcagcgcg gtaagttgca gccaggagaa tatcgcggcg tttatcaaca
     4801 aaatcaaagc gtcaccgtgg tttaaagata ccgtcatcgt cgtctcttct gaccatttag
     4861 cgatgaacaa cacggcgtgg aaatacctta ataagcagga tcgcaataac ctgttttttg
     4921 tcattcgtgg cgacaagccg cagcaagaga cgctggcagt gaagcgtaac acgatggata
     4981 acggcgcgac ggtgctggac attctcggtg gcgataacta tctcggactt ggtcgtagca
     5041 gtttatccgg gcagtcgatg tcggaaatct tcctcaatat caaagagaaa acattggcgt
     5101 ggaagccgga tatcatccgc ctgtggaaat tccctaaaga gatgaaagag ttcactatcg
     5161 accagcagaa aaacatgatt gccttctcgg gtagccattt ccgtttgccg ctgctgttgc
     5221 gggtttcaga caagcgcgta gaaccgctgc cggaaagcga atactcagca ccgctgcgtt
     5281 tccagctggc cgatttcgct ccacgcgaca atttcgtctg ggttgaccgt tgctataaga
     5341 tggcacaact ctgggctccg gaactggcac tctccaccga ctggtgtgtc tcgcaagggc
     5401 agcttggcgg tcagcaaatt gttcagcatg ttgacaaaac aacatggcag ggcaaaacgg
     5461 catttaaaga tacggtcatc gacatggcgc gttataaagg caatgtcgat acgctgaaaa
     5521 ttgttgataa cgatattcgc tacaaagccg acagtttcat cttcaacgtc gccggtgcgc
     5581 ctgaagaggt gaaacagttt agtgggattt cccgtccaga gtcgtggggc cgctggtcca
     5641 acgcgcagct gggcgatgaa gtaaaaatcg agtacaagca tccgctgccg aagaaatttg
     5701 acctggtgat taccgccaaa gcatacggca ataacgccag ccgtcctatt ccggtacgcg
     5761 taggcaatga agaacaaact cttgtgctgg gcaatgaagt gaccaccacc acactgcatt
     5821 tcgataaccc aaccgatgcc gacacactgg taattgtgcc gccggaacct gtctcaacca
     5881 acgaagggaa tatcctcgga cactcgccgc gtaagctcgg gatcggcatg gtggaaatta
     5941 aagttgtgga acgtgaaggg taattcctga ctgatgtgta ggtcgcataa ggtgcgacct
     6001 acacaccttc tccggcctac aaaacatcat tgagaaacag aaaaaaaaca gcgcccaaca
     6061 cttccccgga cgctgcatgg caactttaat aatctcgcct tatcagaaag taattacacc
     6121 cttaatcaac tcacgattgt taatcacatc gcgctcgtag gtttctgcca gcgtggcgaa
     6181 cggatagcga tgggttaaca tcatgtcggc agtgattttt ccttccgcca tcagtcgacc
     6241 gactttagca aaatcttccg gcgtggcgtt gcggctgccc atcatcgtcg tttctttttt
     6301 atggaattcc ggatcggaga actgcaactc acctttaaac aggccgacaa ataccaccgt
     6361 gccgccgtga cgaatcaaat tcacggtgtt attcatcgca tgttgattac ctgtcgcgtc
     6421 gatcactttc tgcgccagcg aaccaccaaa ctgcgcccgt agctgcgcgt caaaatcttc
     6481 ggctgacggg tccagtaaag gtaattccag acgcgttgcc acatgttcac ggcgcgccgg
     6541 actggtatcc gccaccacca cctgtgcgcc atcggcttta gcgattgccg ccgcgcccag
     6601 accgattggc cccgccccga ccaccagcac ctgctcgccg ggagcaatgg ctgcgcgacg
     6661 caccgcatga gcgctaatag cgaaaggttc aatcaatgcg gccgcctgcg ggtcaatacc
     6721 gtctgcgggc aaaatgttcg ccaccggcac gctcaaatac tcactaaaac cgccatcctg
     6781 atgcacgcca atgactgaaa ttttttcaca gcaattggta cgcccgcttt tacacgccgg
     6841 gcattgctga caggcaacat aagggatcac agcaacttgc tgaccatttt taagatcagc
     6901 aatattttta cccagcccaa caatctcccc acatatttca tggcctaaaa cacgtggata
     6961 actaaaaaat ggttgatttc caccccaggc atgaatatcg gtaccgcaaa tcccgacaga
     7021 cttaattttt attaatgctt cattgtcacc cggaataggt atctcgcgtt gtttccagac
     7081 taattctttc ggctgctggc aaattaaaac attcatcgta gacatgattc ggctctccat
     7141 tttttgttgc cttagatatc aatgaaaatg aaaaatggca gcggaacgga aaatctgttt
     7201 tgtgaaaaca cacgcataaa aatgttttaa atcgggtttt aatggactca caaggaggaa
     7261 aatatgagtc gttcacaaaa tttacgccac aatgtgatta accaggtcat tgatgatatg
     7321 gcgcggggtc atatcccttc cccacttcca tcgcaaagtg cgctggcgga aatgtacaac
     7381 atcagccgca caacagtgcg tcatattctc agccacttac gcgaatgcgg cgtcttaacg
     7441 caggttggaa acgactatgt tattgcgcgt aaacctgacc atgatgacgg tttcgcctgt
     7501 actaccgctt caatgagtga acaaaacaaa gtgtttgagc aggctttttt cacgatgata
     7561 aaccagcgtc agttacgccc tggggaaact ttttctgaac tgcaactggc tcgggccgcg
     7621 ggtgtcagcc cggtggttgt aagagaatat cttttaaaat tcggccgtta taatcttatt
     7681 caaagcgaaa aacgcggcca gtggagcatg aagcaattcg atcaatccta cgccgagcag
     7741 ctgtttgagc tacgcgaaat gctcgaaaca cattcacttc agcactttct caacctgcct
     7801 gatcatgatc cccgctggct gcaggcgaaa accatgctcg aacgtcatcg gctactgcgt
     7861 gacaacatcg gcaatagctt tcgcatgttc tcgcaacttg acagagattt tcactcctta
     7921 ctgctttcag ctgccgacaa tatctttttt gatcaatcgc ttgagatcat ctcagtcatc
     7981 tttcattttc actatcaatg ggacgaaagc gatcttaaac agcgcaatat cattgccgtc
     8041 gatgagcata tgaccattct cagcgctctg atttgccgca gtgaccttga tgccaccctt
     8101 gcgctccgta accatttgaa ttcagctaaa caatcaatga ttcgatccat taatgagaac
     8161 acgcgttatg ctcattaagt acggattaaa aacagcaaac tattagcggg tgcacggttt
     8221 tatcaaaaga taaataccgg gaaattcccg cttacctatg ctcacaatca gtcgactaaa
     8281 aatttttttg tgagcggtag taaagtccta aaactttaac ctgccgttaa tgtcaacctt
     8341 gcgtaattca caattacgta aacaattaaa attataaata caggagtccg gcgtggaaaa
     8401 agaaaatatc accctcgatc cgcgttcttc atttactcca tcttcgtcgg cagatattcc
     8461 cgtgccacca gatggattag ttcaacgcag tacccgaatt aaacgcattc aaaccaccgc
     8521 catgttgtta ttattttttg cggcggtaat caattatctc gaccgcagtt cgctgtcggt
     8581 agcaaattta acgattcgtg aagaattggg attaagtgcc accgaaatcg gcgctttgct
     8641 ctccgtgttt tcactcgctt acgggattgc gcaacttcct tgcggcccac tattggatcg
     8701 taaaggccca cgcctgatgc tgggactggg gatgttcttc tggtcactgt tccaggccat
     8761 gtctggcatg gtgcacagct ttacgcagtt cgtgttggtg cgtatcggta tggggattgg
     8821 tgaagcgccg atgaacccat gtggcgtaaa agtcattaac gactggttca acatcaaaga
     8881 gcgcggacgc ccgatgggct tcttcaacgc agcttctacc attggcgttg ccgtaagccc
     8941 accgattctg gcggcgatga tgctggtgat gggctggcgt gggatgttta ttaccattgg
     9001 tgtgctgggg atttttctcg ccattggctg gtatatgctc tatcgcaacc gcgagcacgt
     9061 agaactgact gccgttgaac aagcttatct caatgcaggt agcgtcaatg cccgccgaga
     9121 tccgctcagt tttgccgaat ggcgcagcct gttccgtaac cgcacaatgt ggggaatgat
     9181 gctcggattc agtggcatca actacactgc gtggctgtat ctggcctggc ttcctggtta
     9241 cctgcaaaca gcctataacc tggatttaaa aagcacaggg ttgatggcgg ctatcccttt
     9301 cctgtttggg gctgccggga tgctggtcaa cggttacgtt actgactggc tggtcaaagg
     9361 gggaatggct ccgattaaaa gccgtaagat ctgcattatt gccgggatgt tctgttctgc
     9421 cgcctttacg ctggtcgtac cgcaagcgac aacatccatg acagcggttc tgctgattgg
     9481 catggcactg ttctgtattc actttgccgg aacatcctgc tggggcttga tccacgtcgc
     9541 agttgcttct cgcatgactg cgtcggtggg cagtatccag aactttgcca gcttcatctg
     9601 cgcctctttt gcgccgatca ttactggttt tattgttgat accacccact cattccgtct
     9661 ggcactaatc atctgcggtt gcgtcaccgc agcgggggca ctggcgtaca tcttcctggt
     9721 tcgtcagccg atcaacgacc cacgtaaaga ttaatctccc tatgcccgat aacattttgc
     9781 ttatcgggca tttttatggc gattaaaacg tttcccagtt ctccccgcta tctgccactg
     9841 ccattttacg cggcgtagct ggcgtcacgg tttttaccac agccgatgtt tcacgctgct
     9901 gttgctgctg ttgctgaatc cggaacactg ccacagcttc ggtcaggcga ctggcctgct
     9961 cttccagcgc ggcggcggcg gcggcagatt cttccaccag cgcggcgttc tgttgagtta
    10021 cccggtccat ctcagcaacc gctaagccaa cctgatcgat accacggctc tgctcatcag
    10081 aagcagaagc tatttcgccc ataatgtccg tcacgcgggt cacagcactg acaatctccg
    10141 ccattgtttc cccggcgctt tcgaccagcg tagagccaac atccactttc cccaccgagt
    10201 cttcaatcag gcttttaatt tcacgagccg cctgggcgct acgctgggcc agattacgca
    10261 cttctcccgc aaccaccgca aaaccgcgcc cttgctcacc cgcacgcgca gcctcaaccg
    10321 ccgcgttcaa agccagaata ttggtctgga aggcaatgcc gtcaattacg ctgataatat
    10381 cggcgatttt ctgcgaactg gtggagatat cgcgcatagt ctgcaccacg ttatccacca
    10441 ctttgccgcc gcgttgcgcc gtttcagaag cacttaacgc cagatggctg gcctggcgcg
    10501 cattttcggc gttctgcttc accgttgcgg tcagttgctc catgctggct gccgtctctt
    10561 ccagcgaagc ggcctgttgc tcggtgcgcg aagagagatc gttattgccg gtggcgattt
    10621 cgctggcacc gctatagatg gcattggccc cgttgcgcac atcaccgacg gtacgcatca
    10681 gctctccctg catatggcgc aaactctctg ccagttgccc catctcatta gagccatcca
    10741 cctcaatcgg tttcaccaga tcgccgcctg caatatgacg aatgctgtca atcaggcgat
    10801 tcattggcgc taccagcgag gctttaatac cgaaccagac ggcgaagatg accgccagta
    10861 cgacgatcat cacgcccacc agaatccaca tagcctggct gtaggaggca ttgttatcgc
    10921 tgacggcgat atcatagagc cgatcgtttt gctccatgta agccacatac tgcttctcga
    10981 aaccgtcctg atatccctgg gtcggctgat caaagaactc gttgattttg cctgcaccta
    11041 atagttggat cagctccgcc agcgcattgt gataaatatc gtaattacgt ttgatctctg
    11101 ccgctgcggc ggtgctctga cgcgggtcac gcggcaacgc ttcgtaatcc gcccagtttt
    11161 tttccgcctg tttcagcgaa atactggcac tctgcatcag ctcagcaacg gttgaaccgc
    11221 taccaatatt attctgatcc atcatgtagc ggatacccgc gcggttgagg gtgttacgcg
    11281 tctgcaacaa cgcgacccag ctgccattca gcgtggattg ctgctggcga atggtttgta
    11341 aaacagtgaa attttctttg tcattcttta aggcattaaa gaacagaccg cctgatgtca
    11401 gttgtaaaag gccaaaaaca gccaaaacca gcagtaagct ggtcacgatc ttgatacgtt
    11461 ttaacatggt ttctctttcc tgtggaccga tgcaagattt tcggcctgga aagcaaaaac
    11521 tttatgaaaa ggtgtaaccc gccatccatg gaaaaaccag gcgctggtta tcagatacta
    11581 aaaagttatt cattatcgcc cgggatgtct tcttgtcggg aattgcccag agcaataaat
    11641 tcctctaaca gatgggttaa ctgttgcatt ttctcggcag taaactgagc ttcaatctgc
    11701 cgataggctt cttcaatctg tgtctgagcg cggttataca gcgcctgccc ctctttggtt
    11761 agcgagatat agagcttccg ctgatcattg atcggcttta atcgcaacac taaaccgtcg
    11821 cgttccatcc gcgtaaggat cccggtcagg cttgggcgca aaatgcaggc gcgatacgcc
    11881 agatcgtgaa aatccattga tgggctttcc gccagaatac gcacgatgcg ccactgttgc
    11941 tcagtcaaat tatgccgttt aacgattggg cgaaaataac tcatcgccgc ttctcgcgcc
    12001 tggagcaacg caatggttag agagtcgtgc attatctttc ccctgaaaaa ttcaaaatca
    12061 ttaatataga aacagttaat catcacgtta ccgggactgc gctgcccctg caattcttca
    12121 ttttatcaaa attgagcatg ttttgttaac
//
LOCUS       DAPGWB010000133        12125 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.135, whole genome shotgun sequence.
ACCESSION   DAPGWB010000133 DAPGWB010000000
VERSION     DAPGWB010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12125
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.135"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(121..876)
                     /gene="mlaA"
                     /locus_tag="RHX79_003558"
     CDS             complement(121..876)
                     /gene="mlaA"
                     /locus_tag="RHX79_003558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding lipoprotein MlaA"
                     /protein_id="HDV2198686.1"
                     /translation="MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNF
                     NVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTR
                     FFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRD
                     DGGDMADGLYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYF
                     QRHDFIANGGELKPQENPNAQAIQDDLKDIDSE"
     gene            1170..2102
                     /locus_tag="RHX79_003559"
     CDS             1170..2102
                     /locus_tag="RHX79_003559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HDV2198687.1"
                     /translation="MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHI
                     RQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGF
                     IIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLMRLWGVVLLGNILGTGIAAWAFEY
                     MPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIIL
                     MTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMS
                     HAQIRNDMSNKRKAEARQKAERAENIKKNDKNPA"
     gene            2178..2252
                     /locus_tag="RHX79_003560"
     tRNA            2178..2252
                     /locus_tag="RHX79_003560"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2211..2213,aa:Arg,seq:cct)
     gene            complement(2694..3941)
                     /locus_tag="RHX79_003561"
     CDS             complement(2694..3941)
                     /locus_tag="RHX79_003561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide MFS transporter"
                     /protein_id="HDV2198688.1"
                     /translation="MALNIPFRNAYYRFASSYSFLFFISWSLWWSLYAIWLKGHLGLT
                     GTELGTLYSVNQFTSILFMMFYGIVQDKLGLKKPLIWCMSFILVLTGPFMIYVYEPLL
                     QSNFSVGLILGALFFGLGYLAGCGLLDSFTEKMARNFHFEYGTARAWGSFGYAIGAFF
                     AGIFFSISPHINFWLVSLFGAVFMMINMRFKDKDHQCVAADAGGVKKEDFIAVFKDRN
                     FWVFVIFIVGTWSFYNIFDQQLFPVFYAGLFESHDVGTRLYGYLNSFQVVLEALCMAI
                     IPFFVNRVGPKNALLIGVVIMALRILSCALFVNPWIISLVKLLHAIEVPLCVISVFKY
                     SVANFDKRLSSTIFLIGFQIASSLGIVLLSTPTGILFDHAGYQTVFFAISGIVCLMLL
                     FGIFFLSKKREQIVMETPVPSAI"
     gene            complement(4013..4927)
                     /locus_tag="RHX79_003562"
     CDS             complement(4013..4927)
                     /locus_tag="RHX79_003562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoimidazole riboside kinase"
                     /protein_id="HDV2198689.1"
                     /translation="MSAKVWVLGDAVVDLLPESDGRLLPCPGGAPANVAVGIARLGGT
                     SGFIGRVGDDPFGALMQRTLLTEGVDITYLKQDEWHRTSTVLVDLNDQGERSFTFMVR
                     PSADLFLETTDLPCWRHGEWLHLCSIALSAEPSRTSAFTAMTAIRHAGGFVSFDPNIR
                     EDLWQDEHLLRLCLRQALQLADVVKLSEEEWRLISGKTQNDRDICALAKEYEIAMLLV
                     TKGAEGVVVCYRGQVHHFAGMSVNCVDSTGAGDAFVAGLLTGLSSTGLSTDEREMRRI
                     IDLAQRCGALAVTAKGAMTALPCRQELE"
     gene            5143..6576
                     /gene="cscA"
                     /locus_tag="RHX79_003563"
     CDS             5143..6576
                     /gene="cscA"
                     /locus_tag="RHX79_003563"
                     /EC_number="3.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708234.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose-6-phosphate hydrolase"
                     /protein_id="HDV2198690.1"
                     /translation="MTQSRLHAAQNALAKLHEHRGNTFYPHFHLAPPAGWMNDPNGLI
                     WFNDRYHAFYQHHPMSEHWGPMHWGHATSDDMIHWQHEPIALAPGDDNDKDGCFSGSA
                     VDDNGVLSLIYTGHVWLDGAGNDDAIREVQCLATSRDGIHFEKQGVILTPPEGIMHFR
                     DPKVWREADTWWMVVGAKDPGNTGQILLYRGSSLREWTFDRVLAHADAGESYMWECPD
                     FFSLGDQHYLMFSPQGMNAEGYSYRNRFQSGVIPGMWSPGRLFAQSGHFTELDNGHDF
                     YAPQSFLAKDGRRIVIGWMDMWESPMPSKREGWAGCMTLARELSESNGKLLQRPVHEA
                     ESLRQQHQSVSPRTISNKYVLQENAQAVEIQLQWALKNSDAEHYGLQLGTGMRLYIDN
                     QSERLVLWRYYPHENLDGYRSIPLPQRDTLALRIFIDTSSVEVFINDGEAVMSSRIYP
                     QPEERELSLYASHGVAVLQHGALWLLG"
     gene            complement(6584..7642)
                     /locus_tag="RHX79_003564"
     CDS             complement(6584..7642)
                     /locus_tag="RHX79_003564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708235.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDV2198691.1"
                     /translation="MDLASDVCFCYSARFTANGLGMASLKDVARLAGVSMMTVSRVMH
                     NAESVRPATRDRVLQAIQTLNYVPDLSARKMRAQGRKPSTLAVLAQDTATTPFSVDIL
                     LAIEQTASEFGWNSFLINIFSEDDAARAARQLLAHRPDGIIYTTMGLRHITLPESLYG
                     ENIVLANCVADDPALPSYIPDDYTAQYESTQHLLAAGYRQPLCFWLPESALATGYRRQ
                     GFEQAWRDAGRDLAEVKQFHMATGDDHYTDLASLLNDHFKSGKPDFDVLICGNDRAAF
                     VAYQVLLAKGVRIPQDVAVMGFDNLVGVGHLFLPPLTTIQLPHDIIGREAALHIIEGR
                     EGGRVTRIPCPLLIRCST"
     gene            7810..8028
                     /locus_tag="RHX79_003565"
                     /pseudo
     CDS             7810..8028
                     /locus_tag="RHX79_003565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416866.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine transporter DsdX"
     gene            8046..9374
                     /gene="dsdA"
                     /locus_tag="RHX79_003566"
     CDS             8046..9374
                     /gene="dsdA"
                     /locus_tag="RHX79_003566"
                     /EC_number="4.3.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine ammonia-lyase"
                     /protein_id="HDV2198692.1"
                     /translation="MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGL
                     TEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQ
                     LLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQ
                     YSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGV
                     AVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYL
                     PCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNL
                     TAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMA
                     GPQRVCASVSYQQMHGFSAEQLRNATHLVWATGGGMVPEEEMNQYLAKGR"
     gene            complement(9482..11020)
                     /gene="emrY"
                     /locus_tag="RHX79_003567"
     CDS             complement(9482..11020)
                     /gene="emrY"
                     /locus_tag="RHX79_003567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrY"
                     /protein_id="HDV2198693.1"
                     /translation="MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTI
                     SGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSL
                     STNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPI
                     LGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVG
                     GLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTI
                     GIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNK
                     IDMRLLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFS
                     GLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNSS
                     SQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIAFILLTVLVWFAKPPFTA
                     KGIG"
     gene            complement(11020..>12125)
                     /gene="emrK"
                     /locus_tag="RHX79_003568"
     CDS             complement(11020..>12125)
                     /gene="emrK"
                     /locus_tag="RHX79_003568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrK"
                     /protein_id="HDV2198694.1"
                     /translation="AVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS
                     VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEV
                     ASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKAL
                     VMNTPLNRQPQVVEAADATKEAWLALKRTDIRSPVTGYIAQRSVQVGETVSPGQSLMA
                     VVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLL
                     PAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTKNEDIAEMPDLAST
                     VTSMPAYTSKALVIDTSPIEKEISNIISHNGQL"
BASE COUNT         3389 a         2961 c         2771 g         3004 t
ORIGIN      
        1 catcagtatt tttacatcat tacgtccggg tcattgtcgg tttatctcct tttacttgtg
       61 gtaattgagg gataacaaca aaaaaggtga gtattgcgac tcaccttttt tatttgtttc
      121 ttattcagaa tcgatatctt ttaaatcatc ctgaatcgct tgcgcgttcg gattttcctg
      181 cggtttgagt tcgccgccat tagcgatgaa atcatgacgc tggaagtacg cttcgcgcac
      241 cataatataa ggatcggacg actgacgcag cagaccatcg gaatccaaca actgcgcacg
      301 agtttctatc ccttcaagcg tccatttacc cacagacatc ggccaggtca gccaggaaag
      361 aaccgggtaa agaccatccg ccatatcacc accgtcatca cgcagcgtga agctaccgta
      421 gaacggtaac tggacgtaag gcccataacc cacgccataa tgaccaagcg tactaccgaa
      481 gcggtgaggt tcagtccgtt gcagtttcgg gttcgccatc cctgcaacat caataaaacc
      541 gcccatcccc aaaatggtgt tcaggaaaaa gcgggtaaag tggaccatcc cctgataagg
      601 gtcgccctgc aagaagtagt taaccatcac cgcaggttct tcaaggttgc cagtaaagtt
      661 gctcaaaccg ttacgcgccg gttgcggaac ataatcacgc caggcgacag cgaccggtcg
      721 aacaatatac gggtctaata cattgaagtt gaagttgtac atggtgcggt tgaacccttc
      781 taacgggtca gaacgccctt gctgatctgt accggaactc gcacacccca ccagaagcgt
      841 agttcccaga gcaagcgccg acaggcgaag cttcataaat gtctccctgt ttttttatgg
      901 cttatgcagt ttgccatcca tgacggaacg ataccgtatc cgcctgttta ggtgtgggcg
      961 attgtaacag cacgtcaact gatgtccaga cgccctgatt tgctgatttg atcatagcct
     1021 ggtaatcgcc gccctgtagg ctacttgatt ctatagaaac agaaaaaggc aaacgcagcc
     1081 ttttctacat tttcagagta actcccgcca gttgcgagca aaaaagccgc tacgctttag
     1141 ctatacgtgc taattcaaga gaagagacca tggacaacga caaaattgat caacacagcg
     1201 acgaaattga agttgagagc gaagaaaaag agcgcggcaa aaaaatagaa atagatgaag
     1261 atcgactccc ctcccgggcg atggcaattc atgagcatat ccgccaggat ggtgaaaaag
     1321 agctggaacg cgacgcaatg gcgctactgt ggtcagccat tgcggcgggt ctgtcgatgg
     1381 gcgcttcgct actggcaaaa gggatatttc atgtcgaact ggaaggagtg ccaggcagct
     1441 tcttactgga gaatctcggt tatacctttg gttttattat cgtcattatg gcccgccagc
     1501 aattatttac cgaaaacacc gtgactgcgg tactacccgt catgcaaaaa ccgacaatga
     1561 gcaacgtcgg cttacttatg cgattatggg gcgtcgtgct gctgggtaat attctcggga
     1621 caggtattgc tgcatgggca tttgaatata tgcctatctt caatgaagaa actcgcgatg
     1681 catttgtcaa aatcggcatg gatgtgatga agaacacccc cagcgagatg tttgccaacg
     1741 cgatcatttc cggctggctg atcgccacta tggtttggat gtttcctgct gcgggtgcgg
     1801 caaagattgt ggtgattata ttgatgacct ggcttattgc actgggtgac accacccaca
     1861 tcgttgtcgg ttctgttgaa atcctctatc tggtgtttaa cggcacgctg cactggagcg
     1921 atttcatctg gcccttcgca ctacctactt tagcggggaa catctgcggc ggcaccttta
     1981 tcttcgcgtt aatgagtcat gcacagattc gtaacgacat gagcaacaag cgtaaagcag
     2041 aagcacgcca aaaagcagaa cgtgcggaaa acattaagaa aaatgataaa aacccagcat
     2101 aaatggcgag ggtttaagca atcgagcggc agcgtactta ccccgcagtc cattagcggg
     2161 tatactcatg ccgcattgtc ctcttagtta aatggatata acgagcccct cctaagggct
     2221 aattgcaggt tcgattcctg caggggacac cagataccct tcaaacgaaa tctaccttca
     2281 ccccgtaaaa gatgggtttg gcagcacact tgccttatat ctactcattt ttactgcaac
     2341 aggttgaaat ctcagcactg tcagaaagcg ctgatgacta aacagccctg ggccgggcga
     2401 tgtaaccatc acacagaatc ctgatagcga aatatggcgt gactcgatac ttcactccgc
     2461 aatgcattcc ttgatgaatt cgcaggaccg tgatacacgg gacaggtcac tgaatgacga
     2521 caatgtcctg gaaatcagcg aaccgcgcat ctgaagtaca tttgagcgac tgtaccagaa
     2581 catgaatgag gcgtttggat taggcgatta ttagcagggc taagcatttt actattatta
     2641 ttttccggtt gagggatata gagctatcga caacaaccgg aaaaagttta cgtctatatt
     2701 gctgaaggta caggcgtttc cataactatt tgctcgcgtt ttttactcaa gaagaaaatg
     2761 ccaaatagca acatcaggca gacaataccc gaaattgcga agaaaactgt ctggtagcct
     2821 gcgtggtcaa agagtatccc agtcggcgtt gaaagcagca caatcccaag cgaactggca
     2881 atttgaaaac caatcagaaa gatcgtcgac gacaggcgct tatcaaagtt tgccacgctg
     2941 tatttgaaga cggatatgac acaaagtgga acctcaatgg catgtaacaa cttcactaat
     3001 gaaataatcc aggggttaac gaacagcgcg caggaaagga tacgcaacgc cataatcaca
     3061 actccgataa gtaatgcatt ttttggccct acccgattca caaagaaagg aataatcgcc
     3121 atgcacagcg cttcgagtac cacctggaat gagttgagat aaccatacag gcgcgttcct
     3181 acatcgtgtg attcgaataa acctgcataa aagacaggaa aaagttgttg atcaaaaatg
     3241 ttatagaaag accacgtccc cacaataaat atgacgaaaa cccagaagtt tcgatccttg
     3301 aaaactgcga taaaatcctc tttttttacc cctcccgcat ctgccgctac gcactggtga
     3361 tccttatctt taaaacgcat gttgatcatc ataaatacag cgccaaatag cgagaccaac
     3421 cagaagttga tatggggact gatactaaaa aatatgccgg caaagaacgc gccaatagca
     3481 tagccaaaag atccccaggc gcgcgctgtt ccatattcga aatgaaaatt tcgcgccatt
     3541 ttttcggtga agctatcaag caaaccgcat cccgccagat accccaagcc aaaaaatagc
     3601 gcccccagaa ttagacctac agaaaaattg ctttgcagta acggttcata aacgtaaatc
     3661 ataaacggtc cggtcaagac caggatgaaa ctcatacacc agatgagcgg tttcttcaga
     3721 ccgagtttat cctgaacgat gccgtagaac atcataaata gaatgctggt aaactggttg
     3781 accgaataaa gtgtacctaa ttccgtccct gtcaacccta gatgtccttt cagccaaata
     3841 gcgtataacg accaccacag cgaccaggaa ataaaaaaga gaaatgagta actggatgca
     3901 aaacgatagt acgcatttct gaatggaata ttcagtgcca taattacctg cctgtcgtta
     3961 aaaaattcac gtcctattta gagataagag cgacttcgcc gtttacttct cactattcca
     4021 gttcttgtcg acatggcagc gctgtcattg cccctttcgc cgttactgca agcgctccgc
     4081 aacgttgagc gagatcgata attcgtcgca tttctctctc atctgtagat aatcccgtag
     4141 aggacagacc tgtgagtaac ccggcaacga acgcatctcc cgcccccgtg ctatcgacac
     4201 aattcacaga cattccagca aaatggtgaa cttgtcctcg ataacagacc accacacctt
     4261 ctgcaccttt agtcaccaac agcatggcga tctcatactc ttttgccagg gcgcatatat
     4321 cccgatcgtt ctgtgttttt ccactgataa gtcgccattc ttcttccgag agcttgacga
     4381 catccgccag ttgtagcgcc tgccgcaaac acaagcggag caaatgctcg tcttgccata
     4441 gatcttcacg aatattagga tcgaagctga caaaacctcc ggcatgccgg atcgccgtca
     4501 tcgcagtaaa tgcgctggta cgcgaaggct cggcagacaa cgcaattgaa cagagatgta
     4561 accattcgcc atgtcgccag cagggcaagt ctgtcgtctc taaaaaaaga tcggcactgg
     4621 ggcggaccat aaacgtaaat gaacgttccc cttgatcgtt cagatcgaca agcaccgtgg
     4681 atgtccggtg ccattcatct tgcttcagat acgtgatatc gactccctca gttagcagcg
     4741 ttctttgcat taacgcacca aaaggatcat cccccacccg acctataaac ccacttgttc
     4801 cgcctaatct ggcgattccc accgcaacgt tagctggcgc gccgccagga caaggcagta
     4861 ggcgcccgtc tgattctggc aagagatcta cgaccgcatc ccctaaaacc catactttgg
     4921 ctgacatttt tttcccttaa attcatctga gttacgcata gtgataaacc tctttttcgc
     4981 aaaatcgtca tggatttact aaaacatgca tattcgatca caaaacgtca tagttaacgt
     5041 taacatttgt gatattcatc gcatttatga aagtaaggga ctttattttt ataaaagtta
     5101 acgttaacaa ttcaccaaat ttgcttaacc aggatgatta aaatgacgca atctcgattg
     5161 catgcggcgc aaaacgccct agcaaaactt catgagcacc ggggtaacac tttctatccc
     5221 cattttcacc tcgcgcctcc tgccgggtgg atgaacgatc caaacggcct gatctggttt
     5281 aacgatcgtt atcacgcgtt ttatcaacat catccgatga gcgaacactg ggggccaatg
     5341 cactggggac atgccaccag cgacgatatg atccactggc agcatgagcc tattgcgtta
     5401 gcgccaggag acgataatga caaagacggg tgtttttcag gtagtgctgt cgatgacaat
     5461 ggtgtcctct cacttatcta caccggacac gtctggctcg atggtgcagg taatgacgat
     5521 gcaattcgcg aagtacaatg tctggctacc agtcgggatg gtattcattt cgagaaacag
     5581 ggtgtgatcc tcactccacc agaaggaatc atgcacttcc gcgatcctaa agtgtggcgt
     5641 gaagccgaca catggtggat ggtagtcggg gcgaaagatc caggcaacac ggggcagatc
     5701 ctgctttatc gcggcagttc gttgcgtgaa tggaccttcg atcgcgtact ggcccacgct
     5761 gatgcgggtg aaagctatat gtgggaatgt ccggactttt tcagccttgg cgatcagcat
     5821 tatctgatgt tttccccgca gggaatgaat gccgagggat acagttaccg aaatcgcttt
     5881 caaagtggcg taatacccgg aatgtggtcg ccaggacgac tttttgcaca atccgggcat
     5941 tttactgaac ttgataacgg gcatgacttt tatgcaccac aaagcttttt agcgaaggat
     6001 ggtcggcgta ttgttatcgg ctggatggat atgtgggaat cgccaatgcc ctcaaaacgt
     6061 gaaggatggg caggctgcat gacgctggcg cgcgagctat cagagagcaa tggcaaactt
     6121 ctacaacgcc cggtacacga agctgagtcg ttacgccagc agcatcaatc tgtctctccc
     6181 cgcacaatca gcaataaata tgttttgcag gaaaacgcgc aagcagttga gattcagttg
     6241 cagtgggcgc tgaagaacag tgatgccgaa cattacggat tacagctcgg cactggaatg
     6301 cggctgtata ttgataacca atctgagcga cttgttttgt ggcggtatta cccacacgag
     6361 aatttagacg gctaccgtag tattcccctc ccgcagcgtg acacgctcgc cctaaggata
     6421 tttatcgata catcatccgt ggaagtattt attaacgacg gggaagcggt gatgagtagt
     6481 cgaatctatc cgcagccaga agaacgggaa ctgtcgcttt atgcctccca cggagtggct
     6541 gtgctgcaac atggagcact ctggctactg ggttaacata atatcaggtg gaacaacgga
     6601 tcaacagcgg gcaagggatc cgcgtcactc ttcccccttc acgaccttca ataatatgca
     6661 atgcagcttc ccgcccgata atgtcatgtg gaagctgaat tgtggtcagc ggcggtaaaa
     6721 acagatgccc gacgccaacc agattatcaa agcccattac ggcgacatcc tgcgggattc
     6781 gtaccccctt cgccagaaga acctgataag ccacaaaggc tgcgcgatcg ttaccacata
     6841 tcagaacatc aaaatctggt ttgcccgatt tgaagtggtc attgagtaaa cttgcgagat
     6901 cggtgtagtg atcatcacct gttgccatgt gaaattgttt cacctcagcc agatctcgtc
     6961 cagcatcacg ccaggcctgc tcaaatccct gccgacgata ccctgttgcc aacgcacttt
     7021 ccggtagcca gaagcataac ggttgacgat agcccgccgc gagcaaatgc tgtgttgatt
     7081 catattgtgc agtgtaatca tcagggatat aactgggtaa cgctgggtca tccgccacac
     7141 agttcgccaa tacaatattt tcaccataca gagactcagg cagcgtgata tgtcgcagcc
     7201 ccattgtagt atagataatg ccatccggac ggtgggcaag cagctgacgt gccgcgcggg
     7261 cagcgtcatc ttcagaaaaa atattgatta aaaaactatt ccagccgaac tcgctggcgg
     7321 tttgctcaat ggcaagcaga atatcaacag agaaaggagt ggtagccgtg tcctgcgcca
     7381 gcacggcgag agtcgacggc ttacgtcctt gagcgcgcat cttacgggcg gaaagatcag
     7441 gaacataatt cagggtctgg attgcctgca atacgcggtc acgcgttgca ggacgcacag
     7501 attctgcatt atgcatcacc cgggagactg tcatcatcga cactcccgcc aggcgtgcga
     7561 catcctttaa tgaagccata cccaagccgt ttgccgtaaa acgggcactg tagcagaaac
     7621 agacgtcact ggcgagatcc aacgccctat cacctgacac agcaatacaa taaaaaataa
     7681 caataattcc cggacaattg tccccaattc cgcctctgtt ctcgccaacg agtaaccata
     7741 taggcaagta agtaaaacat gccaactggc atcgccaacc tggagaagaa aatataaata
     7801 tggatcattg tgctgccgct gtatcccgac atcagcccgg aaattattgc gattgctatc
     7861 ggttcaggtg caattggctg cacgatcgtt acggactcgc ttttctggct agtgaagcaa
     7921 tattgcggcg ctacgctcaa tgaaacattt aaatactata cgacagcgac atttatcgct
     7981 tcagtcgtcg ctctggcggg cacattcctg ctgtcattta tcatctaagc gcaaagagac
     8041 gtactatgga aaacgctaaa atgaactcgc tcatcgccca gtatccgttg gtaaaggatc
     8101 tggttgctct taaagaaacc acctggttta atcctggcac gacctcattg gctgaaggtt
     8161 taccttatgt tggcctgacc gaacaggatg ttcaggacgc ccatgcgcgc ttatcccgtt
     8221 ttgcacccta tctggcaaaa gcatttcctg aaactgctgc cactgggggg attattgaat
     8281 cagaactggt tgccattcca gctatgcaaa aacggctgga aaaagaatat cagcaaccga
     8341 tcagcgggca actgttactg aaaaaagata gccatttgcc catttccggc tccataaaag
     8401 cacgcggcgg gatttatgaa gtcctggcac acgcagaaaa actggctctg gaagcggggt
     8461 tgctgacgct tgatgatgac tacagcaaac tgctttctcc ggagtttaaa cagttcttta
     8521 gccaatacag cattgctgtg ggctcaaccg gaaatctggg gttatcaatc ggcattatga
     8581 gcgcccgcat tggctttaag gtgacagttc atatgtctgc tgatgcccgg gcatggaaaa
     8641 aagcgaaact gcgcagccat ggcgttacgg tcgtggaata tgagcaagat tatggtgttg
     8701 ccgtcgagga aggacgtaaa gcagcgcagt ctgacccgaa ctgtttcttt attgatgacg
     8761 aaaattcccg cacgttgttc cttgggtatt ccgtcgctgg ccagcgtctt aaagcgcaat
     8821 ttgcccagca aggccgtatc gtcgatgctg ataaccctct gtttgtctat ctgccgtgtg
     8881 gtgttggcgg tggtcctggt ggcgtcgcat tcgggcttaa actggcgttt ggcgatcatg
     8941 ttcactgctt ttttgccgaa ccaacgcact ccccttgtat gttgttaggc gtccatacag
     9001 gattacacga tcagatttct gttcaggata ttggtatcga caaccttacc gcagcggatg
     9061 gccttgcagt tggtcgcgca tcaggctttg tcgggcgggc aatggagcgt ctgctggatg
     9121 gcttctatac ccttagcgat caaaccatgt atgacatgct tggctggctg gcgcaggaag
     9181 aaggtattcg tcttgaacct tcagcactgg cgggtatggc cggacctcag cgcgtgtgtg
     9241 catcagtaag ttaccaacag atgcacggtt tcagcgcaga acaattgcgt aatgccactc
     9301 atctggtgtg ggcgacggga ggtggaatgg tgccggaaga agagatgaat caatatctgg
     9361 caaaaggccg ttaataacgt ttcaacgcag catcgcaatc ctttccctgg gtgagcgatg
     9421 ctgccgatgg cgcagactta agatccccgg tcttacccgc tataaccccc tccttttatc
     9481 atcacccaat gcctttcgct gtaaacggcg gtttcgcaaa ccaaaccaaa accgtaagta
     9541 agataaaagc aatagccgcc atacggaaaa tctcatttgc agaaatagaa agtgactgct
     9601 gggttatttc attattaatt tcattaagaa ctcctgaaag cgaaccataa tatttatcca
     9661 taatttgtga cgatgaatta aacacggggt taaattgatc gatggttgct gtcaactgac
     9721 tatggtgtaa cgattcgcgt cgtccccaca gcgtcattgt caacgacgta ccaactgatc
     9781 ctgacaaggt acgaaaaaaa ttactcatac tcgaggcatt ggcaaattta ttatctggca
     9841 agcctgaaaa cgaaatcgtt gttaagggta aaaagaaaca ggcaacggcg aatccctgga
     9901 aaaactgtgg caaaatgatg cctgtaaaat caatcgttgg cataaatgtc acagaacgcc
     9961 agtaatagca aaccgcatac atcaaaaaac taaatgtcac taacaaccgc atgtctattt
    10021 tgttgccata acgtcctatc aaaggtgaaa ttaatagtgg catgatgccg atgggcgcat
    10081 aagcaagtcc ggcccatatc gcattatacc ccatcgtttc ctggagtaac tgcggcataa
    10141 ggacgatcgc tccagagtaa aataaatacg cgcatgtgat actcacaata ccaatggtga
    10201 agttacggga cttaaacaaa ctgagatcaa gaatcgggtt ctctgaggtc gactcccaaa
    10261 tgactaaaga gatcagagaa ataactgata ctactgttaa tattattatt gtactcgagt
    10321 tgaaccaatc cagatcgcgc cctttatcaa gcataatttg caagccacca acaccgagca
    10381 ctaacagggt cagtcctggt agattcattt tgaccggtga agtttcagtt tctcttcctt
    10441 taagtaaggt taagcataat gtcaggacga taatccccat agggacattg attaaaaata
    10501 tccaacccca gctaaagtta tcgcaaatat aaccgcccaa tatcggccca catatcggag
    10561 cgataatcac ggtcattgac cataatgcca gagcaaatgt tcttttttct ggtggataat
    10621 tccttaataa taaactctgt gacagtggaa ttaacggccc cgccattaat ccctgaacga
    10681 ctctaaaaaa tatcagcaca tcaagattgg tcgataaact acacattaag gaagacagcg
    10741 aaaaaaaagt gactgaaagt aaaaataacc ttaattcgcc tattctttgt gccagcctgc
    10801 cggtaacagg gatcgcaatg gcatttgcta cgccaaacga ggtgataacc caggtgcctt
    10861 cgtctgttga tgctcccaga aagccagata ttgtcggtat tgcgacgtta gaaatagtgg
    10921 aatccaacat ttgcataaac gtcgctaatg acaatgcaat agtaacgcac cataacgtcc
    10981 caccggttaa tggtgccgga gtcgatttag tgattgccat taaagttgtc cattatgcga
    11041 aataatgttg ctaatttctt tttctatcgg actggtatcg ataactaaag ccttactggt
    11101 ataagccggc atggacgtca cggttgaagc cagatcaggc atctcagcaa tgtcttcgtt
    11161 cttcgtatca atagttgcag tcatcgataa accaatgcgt aaggggtgtt ccatgagttc
    11221 ttttggatca agagaaactt caaccggtac acgctgaacg attttgatcc agttccctgt
    11281 cgcattttgt gcaggtaata aggagaacgc attgccggtt cccatattga tccctgtcac
    11341 ccgaccatga aacacaacat tttcaccata aagatcgctg ataatattga ctgattgacc
    11401 aatccgtaca tccgtgagtt gtgtttcttt aaagttggca ttaacccaca tttgacgtgc
    11461 cggtacgaca gccattaacg attgtccggg actcactgtt tcgccgacct gaacactccg
    11521 ctgggcaata tagccagtaa ccggactcct tatatccgta cgtttaagcg ccaaccaggc
    11581 ttctttagtt gcatccgccg cttccacgac ttgtggctga cggtttaatg gtgtgttcat
    11641 tactaaagct ttattcgctt tataagcctg gatagcggca ttcaatgccg ctttgctact
    11701 tattaacgta tctttggtat gctccagcgt ttcttttgaa ataaccccct gcttcgctaa
    11761 cggcactcga cggttataat cttctaaaga ttgttgatac tgaatacgtg ctgaagcgac
    11821 ttcggcactg tattgtttat cctgtaagta tagtttattc gtttgccgaa caatatttgc
    11881 cagattattt ttagctttat tgagtgcgat agtggcatca gttttatcca gtgaaactaa
    11941 aatgtcacct tgtcgaacgt agttcgtatc tttatgatta acgacagtga cactacctga
    12001 gacttgtgca gaaattggat ctgcattccc cgtgacatag gcgtcatctg tactaatcat
    12061 gtcttctaat tccattgacc aataggcata ggcacctgaa aacgcaataa ataaaactac
    12121 cgcca
//
LOCUS       DAPGWB010000134        12093 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.136, whole genome shotgun sequence.
ACCESSION   DAPGWB010000134 DAPGWB010000000
VERSION     DAPGWB010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12093
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.136"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            73..675
                     /locus_tag="RHX79_003569"
     CDS             73..675
                     /locus_tag="RHX79_003569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416376.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebB family permuted papain-like enzyme"
                     /protein_id="HDV2198695.1"
                     /translation="MNINYPAEYEIGDIAFTCIGAALFGQISAASNCWSNHVGIIIGH
                     NGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTEQQKQRIVEQVPSRLR
                     KLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGQLLNSNPNAKLTFWKFWFL
                     GSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV"
     gene            complement(677..1198)
                     /gene="ruvC"
                     /locus_tag="RHX79_003570"
     CDS             complement(677..1198)
                     /gene="ruvC"
                     /locus_tag="RHX79_003570"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005068993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDV2198696.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSR
                     LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEY
                     AARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM
                     SESRLNLARGRLR"
     gene            complement(1233..1973)
                     /locus_tag="RHX79_003571"
     CDS             complement(1233..1973)
                     /locus_tag="RHX79_003571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDV2198697.1"
                     /translation="MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPD
                     ANPRLRAAIDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECL
                     SDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAE
                     DVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMR
                     LIDMLEDCDDVQEVYHNGEISDEVAATL"
     gene            complement(2002..2454)
                     /gene="nudB"
                     /locus_tag="RHX79_003572"
     CDS             complement(2002..2454)
                     /gene="nudB"
                     /locus_tag="RHX79_003572"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HDV2198698.1"
                     /translation="MEDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVE
                     EGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESW
                     FCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA"
     gene            complement(2572..4344)
                     /gene="aspS"
                     /locus_tag="RHX79_003573"
     CDS             complement(2572..4344)
                     /gene="aspS"
                     /locus_tag="RHX79_003573"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDV2198699.1"
                     /translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI
                     VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTII
                     NRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI
                     ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD
                     EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAE
                     RRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQI
                     DEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMI
                     FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHP
                     FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE
                     EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE
                     APSFANPTALAELSIQVVKKAENN"
     gene            4654..5220
                     /locus_tag="RHX79_003574"
     CDS             4654..5220
                     /locus_tag="RHX79_003574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HDV2198700.1"
                     /translation="MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKF
                     RASGQPVFLVRVGWSADHAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKR
                     QWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAAS
                     AEQHNNSINHIYPRIARVRSVEEILHAL"
     gene            5217..6035
                     /locus_tag="RHX79_003575"
     CDS             5217..6035
                     /locus_tag="RHX79_003575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HDV2198701.1"
                     /translation="MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKP
                     EVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQL
                     PATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVIL
                     DSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQ
                     KLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEIGAVPAIPQQSSLF"
     gene            6088..6483
                     /locus_tag="RHX79_003576"
     CDS             6088..6483
                     /locus_tag="RHX79_003576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310606.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HDV2198702.1"
                     /translation="MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAI
                     RIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRS
                     GMSATWCALLLMVLANLWYMPWELVFSLR"
     gene            6524..7267
                     /gene="cmoA"
                     /locus_tag="RHX79_003577"
     CDS             6524..7267
                     /gene="cmoA"
                     /locus_tag="RHX79_003577"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDV2198703.1"
                     /translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS
                     MIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI
                     DAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGAL
                     VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL
                     HKAGFEHSELWFQCFNFGSLVALKAEDAA"
     gene            7264..8235
                     /gene="cmoB"
                     /locus_tag="RHX79_003578"
     CDS             7264..8235
                     /gene="cmoB"
                     /locus_tag="RHX79_003578"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDV2198704.1"
                     /translation="MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSN
                     AVEFLPEIKPYRLDLLHSVTAESEEPLSTGQIKRIETLMRNLMPWRKGPFSLYGVNID
                     TEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ
                     FEAVRKLLGNDQRAHLIPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN
                     EGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRIVDVC
                     VTTTEEQRRTEWMVTESLSDFLDPHDPSKTVEGYPAPKRAVLIARKP"
     gene            complement(8400..10829)
                     /gene="torZ"
                     /locus_tag="RHX79_003579"
     CDS             complement(8400..10829)
                     /gene="torZ"
                     /locus_tag="RHX79_003579"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310609.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine N-oxide reductase TorZ"
                     /protein_id="HDV2198705.1"
                     /translation="MTLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRW
                     GAMNVEVKDGKIVSSTGALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNPLQPA
                     KGRGEDTYVQVSWEQALKLIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQR
                     YMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQTSWPLILENSQAVVLWGMNPL
                     NTLKIAWSSTDEQGLEYFHQLKKSGKPVIAIDPIRSETIEFFGDNATWIAPNMGTDVA
                     LMLGIAHTLMTQGKHDKVFLEKYTTGYPQFEEYLTGKSDNTPKSAAWAAEITGVPEAQ
                     IVKLAELMAANRTMLMAGWGIQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYS
                     NGGNPTRVGGVLPEMSAAIAGQASEAADDGGMTAIPVARIVDALENPGGKYQHNGKEQ
                     TYPNIKMIWWAGGGNFTHHQDTNRLIKAWQKPEMIVVSECYWTAAAKHADIVLPITTS
                     FERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELLKPGGKEIYTEGKDE
                     MAWLKFFYDAAQKGARAQRVTMPMFNVFWQQNKLIEMRRSEKNEQYVRYGDFRADPVK
                     NALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDEWKGTADEKQLQLLTAHPAHRLH
                     SQLNYAGLRKKYAVADREPITIHTEDATRFGIANGDLVRVWNKRGQILTGAVVTDGIK
                     KGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANACAGNSALVYIEKYTGNAPK
                     LTAFDKPAVQA"
     gene            complement(10854..11954)
                     /locus_tag="RHX79_003580"
     CDS             complement(10854..11954)
                     /locus_tag="RHX79_003580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707761.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDV2198706.1"
                     /translation="MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHS
                     MSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDS
                     DDKFETHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKGGET
                     CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSRIGELATVNPGTD
                     LTVVDASGKQPIVLLQGYQMQGSENTLYLAAGQRLALATLSEEGIKALTVNGEWQADE
                     YGNQWRQASLQGALTDPALADRKPLWQYAEKLDDTYCAGCHAPIAADHYTVNAWPSIA
                     KGMGARTSMSENELDILTRYFQYNAKDITEKQ"
BASE COUNT         2786 a         3213 c         2920 g         3174 t
ORIGIN      
        1 attgcacctc ctgaaaaaat aaatttttta tgctattacg tatattcgta tctatttcaa
       61 tggaatgaca acgtgaatat taattaccct gctgaatatg aaattggaga tatcgccttt
      121 acatgtatag gtgctgcctt atttggtcaa atatcagctg catcaaattg ttggagtaat
      181 cacgtcggga tcattatcgg tcataacggt gaagacttcc tggttgcaga aagccgggtt
      241 cccctttcaa ccatcaccac gctatctcgt tttattaaac gttcgtctaa tcaacgctat
      301 gctataaagc gattagacgc tgggctgaca gaacaacaaa aacaacgaat tgttgaacag
      361 gttccttccc ggctacgcaa actttaccac acgggtttta aatacgaatc ttcgcgccag
      421 ttctgttcaa aatttgtctt tgatatttat aaagaggcgc tatgtattcc ggtgggtgaa
      481 atagagacgt ttggacaact gttaaatagc aatccgaatg caaaactcac tttctggaaa
      541 ttctggttct taggttctat tccgtgggag cgtaaaaccg tcacgccagc cagtttgtgg
      601 catcatccgg gtttggtgtt gattcatgcg gagggagtgg aaacgcctca gccggaactg
      661 accgaggcgg tataacttaa cgcagtcgcc ctctcgccag gttcagccgc gattcgctca
      721 tctgcatcgc attctgactg acgtgacaat gggtaatcgc gatagctaac gcatcggcgg
      781 catccgcctg tggattagcg ggcagtttca gcaaggtgcg gaccatatgc tgcacctggc
      841 ttttttcggc actaccaata cctaccaccg tttgctttac ctgacgtgcc gcgtattcaa
      901 ataccggcaa ttcctgattc accgccgcaa caatcgccac gccgcgcgcc tggcccagtt
      961 tcagggctga gtcagcgttc ttcgccataa agacttgttc aatggcgaaa taatcaggct
     1021 ggaactgggt gatgatttcc gtcacgcccg catagatgag cttcagacga gacggtaaat
     1081 catccacttt ggtgcgtatg catccgctac ccaggtagga cagttgcctg cctacctggc
     1141 gaattacgcc atagccggtc acgcgcgaac ccggatcaat gccgagaata atagccatca
     1201 cgcgtctccg ttttgctgtt tagcaggcct catcagagag tcgctgcgac ctcatcagag
     1261 atttcaccgt tatggtaaac ttcctgcacg tcgtcgcaat cttccagcat atcgatcaga
     1321 cgcatcagtt tcggtgcggt ttctgcatcc atatcagctt tggtggacgg gatcatggaa
     1381 acttccgcgc tgtctgcttt cagacctgcc gcttccagag cgtcgcgcac tttacccatt
     1441 tcttcccatg cagtgtagac atcaatcgcg ccgtcatcat aggtcacaac gtcttcagca
     1501 cctgcttcca gagctgcttc catgatggtg tcttcatcgc ctttctcgaa ggagatcacg
     1561 ccttttttgc tgaacagata ggctacggaa ccatctgtac cgaggttacc gccacatttg
     1621 ctgaatgcat gacgcacttc agcaacggta cggttgcggt tgtcagacag acattcaatc
     1681 atgattgccg tgccgccagg accgtaacct tcgtagatga tggtttccat gtttgcatca
     1741 tcatcaccgc ccacaccacg tgcaattgcg cggttcagtg tgtcgcgggt catgttgtta
     1801 gacagtgctt tatcaattgc tgcacgcaga cgcgggttag cgtccggatc gccaccgccc
     1861 agcttagccg cggttaccag ctcacgaatg attttagtga agattttacc gcgcttagca
     1921 tcctgcgcag ctttacgatg tctggtgttg gcccatttac tatgacctgc cataaaaata
     1981 tctccagata gccctgcctg ttcaggcagc gttaattaca aactgttcaa tcgcctgccg
     2041 gttgctccag gacttagtga gcgccgccgc agcaggcgca tcaagccact tgtaagccag
     2101 atgttcagtg aaaacgatct gccgctcgtg cggaagcgca agacagaacc atgattccgt
     2161 attacgcgtc acgcccggcg catagcgatg acgtaaatgt gaaaaaattt caaactctac
     2221 cgtgcgctga cagtcaatta aggtcagttg ttcagcgaca acatcaatgg tgacctcttc
     2281 ctttacttcg cgcatggcag cttgcggcgc ggtttcaccc tcttccacgc tgccggttac
     2341 cgactgccag aaatcgggat cgtcacgccg ctgcaacatc agcacccgtt tcgtatcttg
     2401 tgcatagatg accactaaga tcgaaacggg acgcttatac actttatcct ccacgctgcc
     2461 tcttcgttga ctgccttcgc tcatcccatt cacatagtta tctatgctca tgggagttca
     2521 ctcagttgcc gccttgatgc aacgcgaatg atttcgtgta tttgagtcat atcagttatt
     2581 ctcagccttc ttcacaacct gaatgctcag ctcagccagt gcagtcgggt tagcaaagct
     2641 cggtgcttca gtcatcagac acgctgccgc cgtggttttc gggaaggcga taacgtcacg
     2701 gatattgtcg gtgccggtca gcagcatggt cagacggtca agaccgaatg ccagacctgc
     2761 gtgcggcgga gtaccgtatt tcagagcgtc gagcaggaag ccgaatttct cgcgctgttc
     2821 ctcttcgttg atacccagaa taccaaacac cgtctgctgc atatcaccat tatggatacg
     2881 tactgaacca ccgcccactt cgtaaccatt gatgaccata tcgtaagcgt tcgccaccgc
     2941 attttccggt gcagctttca gttctgcagc agtcatgtct ttcggtgagg tgaacggatg
     3001 gtgcattgcc gtcaggccgc cttcaccgtc gtcttcaaac atcgggaagt cgataaccca
     3061 cagcggtgcc catttgcttt cgtcggtcag accaaggtct ttacccactt tcaggcgcag
     3121 tgcgcccatc gcgtcggcaa caattttctt gttgtcggca ccgaagaaaa tcatatcgcc
     3181 atcttgcgcg gcagtacgat ccaggatggc ttcgatgatt tctgcattaa ggaacttcgc
     3241 taccgggctg ttgatacctt ccagaccttt cgcgcgttcg ttaactttga tgtaagccag
     3301 acctttcgcg ccgtagattt taacgaagtt accgtattcg tcgatctgct tacgggtcag
     3361 cgatgcgccg cccggaacgc gcagagcggc aacgcgacct ttcggatcgt tcgccggacc
     3421 tgcaaatact gcaaactcaa cagatttcag cagatcagca acgtcggtca gttccatcgg
     3481 gttacgcaga tccggtttat cagaaccata acggcgttct gcttccgcaa aggtcattac
     3541 cgggaaatcg cccagatcca cgcccttcac ttccagccac aaatgacgca ccagcgcttc
     3601 catcacttca cgcacttgcg gcgcggtcat gaaagaagtt tccacatcga tctgagtaaa
     3661 ttcaggctga cgatcagcgc gcaggtcttc gtcacggaag catttaacga tctgatagta
     3721 acggtcaaaa ccggacatca tcagcagctg tttgaacaac tgtggggatt gcggcagtgc
     3781 gtagaattta cctttgtgca cacgagaagg caccaggtag tcacgcgcgc cttccggcgt
     3841 ggctttggtc agcatcggag tttcgatgtc gaggaagccg tggtcatcca taaaacggcg
     3901 caccaggctg gtgattttag cgcgggtttt caggcgctgc gccatttccg ggcgacgcag
     3961 gtcgaggtag cggtatttca gacgcgcttc ttcggtgttg acgtggttag agtcaagcgg
     4021 cagaacatct gcgcggttga tgatagtcag cgaggacgcc agcacttcaa tttcgccggt
     4081 cgccatatcg cggttaatat ttttttcgtc acgcgcacgt acggtgcccg taacctgaat
     4141 gcagaactca ttacgcagtt cagaggccag ctttaacgcg tccgcacgat ccggatcgaa
     4201 aaatacctgc acgatacctt cgcggtcgcg catatcgatg aagatcaggc taccaagatc
     4261 acgacgacgg ttgacccaac cacacagagt cacctgctgc cccacgtggg acaaacggag
     4321 ctgtccacaa tattctgtac gcatgagata tcccttaact tagctgccgg cggatgcccc
     4381 ctgctgcgca ggtgaccaag tcgcagcgtt agctgtatgt cacaactgaa tgaaaaaagg
     4441 cggctattat actggaaatt ctgccgcacc gtaagagcct ggcccgcgct ggaacgcctc
     4501 gttaccactt tatatcgggc ctgaaatcag actctacgcc agtttgctat aaaggtgttg
     4561 cccgaactca taaaaattaa caaaatttgt cgttccgcca tcggctaatc gcattaaggt
     4621 gtgaggcacg attttgtttt ttcaggagtc agcatgcttg aacttaatgc taaaaccact
     4681 gcgttggtgg tgatcgattt acaagaaggc atcttacctt ttgccggtgg tccacatact
     4741 gccgatgagg tagttaatcg cgccgggaag ctggcggcga aatttcgcgc cagcggtcag
     4801 cccgtgtttc tggtgcgcgt tggctggtct gccgatcacg ccgaagcatt aaaacagccg
     4861 gttgatgccc cctcccccgc taaagtgttg cccgaaaact ggtggcaaca tccagctgca
     4921 ttaggtgcaa ctgacagtga tatcgaaatc atcaaacgtc agtggggtgc gttttacggt
     4981 acggatctgg agttgcaact gcgccgccga ggtatcgata caatagtgtt atgtgggatc
     5041 tcgaccaata tcggtgttga atccaccgcc cgcaatgcct gggaacttgg ctttaatctg
     5101 gtgattgccg aagacgcctg tagtgccgcc agcgccgagc agcacaataa cagcatcaac
     5161 catatctacc cacgcatcgc ccgtgtgcgt agcgtggaag agatccttca cgcgttatga
     5221 tttacatcgg tctaccgcaa tggtcgcatc ctaaatgggt gcggttggga atcaccagcc
     5281 ttgaagagta tgcccgccac tttaactgcg tggagggcaa caccacgctt tacgccctgc
     5341 cgaaacccga ggttgtcctg cgctggcgtg aacagaccac agatgacttc cgcttctgtt
     5401 ttaagtttcc ggcgaccatt tcgcatcagg cagcattacg acattgcgat gatttagtga
     5461 ctgaattttt gacccgcatg tcaccgttgg ctccgcgcat tgggcaatac tggctgcaac
     5521 tgcctgccac attcggccca cgggagctgc ctgcgctttg gcattttctc gattctctcc
     5581 ctggcgaatt taattatggt gtggaagtcc gccatccaca gtttttcgcc aaaggggaag
     5641 aggaacaaac gcttaatcgc ggtttacatc agcgcggcgt taatcgggtg attttagaca
     5701 gccgcccggt tcatgcagca cgtccacaca gtgaagctat tcgcgacgct caacgaaaaa
     5761 aacctaaagt tccggtacat gctgtactga cggcgacaaa tccgctgatc cgttttatcg
     5821 gtagtgatga tatgacgcaa aaccgggaat tatttcaggt ctggttacaa aaattagcgc
     5881 agtggcatca gaccactacg ccttatcttt ttttacatac gccagacatt gcccaggccc
     5941 cggaactggt acataccctg tgggaagact tacgtaaaac gcttccagag atcggagcag
     6001 ttccggctat tccacagcaa tcttctcttt tctgaatttg ccacctatca tagacaggtg
     6061 ccatcggcca ttttaaaggg agtttgtatg gtaagcgcgc tgtatgccgt tttaagtgcg
     6121 ttgttattaa tgaagttctc ttttgatgtc gttcgcctgc gaatgcagta ccgcgttgcc
     6181 tatggtgacg gtggttttag cgaactgcaa agcgctattc gcattcatgg taacgcggtg
     6241 gaatatattc ccatcgcgat tgtgctgatg ctgtttatgg aaatgaatgg cgcagaaacc
     6301 tggatggtgc atatttgcgg catcgttttg cttgctggtc gtctgatgca ttattacggt
     6361 tttcatcacc gtctgttccg ctggcgacgt tccggcatga gcgccacctg gtgtgcgctg
     6421 ttgctgatgg tgctggcgaa tctttggtat atgccctggg agttggtttt ctccctgcgt
     6481 tagcgcacaa tacgccactt tctttttccc ggatttttac gttatgtctc accgcgacac
     6541 gctattttct gcccctatcg ccagactggg cgactggacc tttgatgaac gggtagctga
     6601 agtcttcccg gatatgatcc agcgttccgt tcccggctat tccaatatta tttccatgat
     6661 tggtatgtta gccgagcgct tcgttcaacc tggtacgcag gtttacgatc tgggttgttc
     6721 tctgggcgcg gcgacgctct cggtgcgtcg caacattcat catgataatt gcaaaattat
     6781 tgccatcgac aactccccgg cgatgattga acgctgccgt cgtcatattg acgcctataa
     6841 agcccctacg ccagtagacg tcattgaagg tgatattcgc gatatcgcca ttgaaaacgc
     6901 atcgatggtg gtgctgaatt ttaccctgca attcctggaa ccttccgagc gccaggcatt
     6961 actggataaa atttatcaag gactgaaccc gggcggcgcg ctggtgcttt cggaaaaatt
     7021 cagtttcgaa gatgccaaag ttggtgaact gttgttcaac atgcaccacg actttaaacg
     7081 tgccaacggt tacagcgaac tggagatcag ccagaagcgc agcatgctgg aaaacgtgat
     7141 gctgaccgat tccgtggaaa cccataaagc acgcctgcat aaagccggtt ttgagcatag
     7201 cgagctgtgg ttccagtgct ttaactttgg ttcactggtg gcattaaaag cagaggacgc
     7261 tgcatgatcg actttggtaa cttttattct ctgattgcca aaaatcatct ttcacactgg
     7321 ctcgaaacgc tgcccgcgca gattgctaac tggcagcgcg agcagcagca cgggctgttt
     7381 aagcagtggt ccaacgcggt ggaatttctg cctgaaatta aaccgtatcg tctggattta
     7441 ttgcatagcg taaccgccga aagcgaagag ccactgagca ccgggcaaat taaacgcatt
     7501 gaaacgctta tgcggaacct gatgccatgg cgcaaagggc cgttctcact gtatggcgtc
     7561 aacatcgata ccgaatggcg ttccgactgg aaatgggatc gtgttctgcc ccatctttct
     7621 gatttaaccg gacgcaccat tctggatgtc ggctgcggca gcggttatca catgtggcgc
     7681 atgattggcg caggcgcgca cctcgcggtg gggatcgacc ctacgcaact gtttctgtgc
     7741 cagtttgaag cggtgcgtaa actactgggt aacgatcagc gcgcacattt gataccgtta
     7801 ggtattgaac agcttccggc actgaaagcc tttgataccg tcttttcgat gggcgtgctt
     7861 taccatcgcc gttcgccgct ggagcatctc tggcagttga aagatcaact ggtgaatgag
     7921 ggtgaactgg tgctggaaac gctggttatt gatggtgatg agaacacggt gctggtacca
     7981 ggcgatcgtt acgcgcaaat gcgtaatgtc tatttcatcc cttccgcgct ggcgctgaaa
     8041 aactggctga agaagtgtgg ttttgtagat atccgcattg tggatgtgtg cgttaccact
     8101 actgaagagc agcgacgcac tgaatggatg gttaccgaat ctctgtccga tttcctcgac
     8161 ccacatgatc cgagtaagac agttgaaggt tatcctgcgc ctaaacgcgc ggtgctgatt
     8221 gcgcgcaagc cgtaaaggtc tggtattact gccggatgcg gcgtgaatgc cttatccggc
     8281 ctacaaaccc ttgctaattc aatctattgc agggactatg taggcctgat aagcatagcg
     8341 catcaggcag ttttacgttt gcataacctc agcgcccgtt tccgggcgct attcacttct
     8401 tacgcctgaa cagcaggctt atcaaatgcc gttaacttcg gtgcgttacc cgtatatttt
     8461 tcgatataca ccagcgcaga gttaccggca caggcatttg ccagctgcga gctggggata
     8521 tccgccgtta acacgttcgc actgccgttt ttacataagc cattttccag atctggccat
     8581 gcaccttcat gcacgcatac cacgcctttt ttgatcccgt cagtcaccac cgcacctgtt
     8641 agtatctgac cacgtttgtt ccagacacgc accagatcgc cattcgcaat accaaatcga
     8701 gtagcatctt cggtgtgaat agtgatcggt tcacgatcgg caaccgcata ttttttacgc
     8761 agtcccgcat agttaagctg actgtgtaaa cggtgtgccg gatgtgcggt cagaagctgc
     8821 aactgcttct cgtcggcggt acccttccac tcatcaggcg caagccaggt tgggtgtgcc
     8881 gggcaatcct tatagccaaa tttttccaac gttttggagt aaatctcaat tttgccactt
     8941 ggcgtaccca gcgcattttt caccggatcg gcgcggaaat caccataacg aacgtactgt
     9001 tcgttcttct cgctgcggcg catttcgatc agtttatttt gctgccagaa gacattaaac
     9061 attggcatag tgacgcgttg cgcacgggcc cctttctgag cggcatcata gaaaaatttc
     9121 agccacgcca tttcatcttt accttcggta tagatctctt ttccgccagg tttgagtaat
     9181 tccgcaagat cggcaaacac atcaaaatcg tttcgcgctt caaattgcgg agcaacagcc
     9241 tgcttcatcg gcacaatatg ctggttgctg taatcaccgg tcatcgtcaa gtcattgcgc
     9301 tcaaacgatg tggtgatcgg taatacgata tctgcatgtt tagcagctgc ggtccagtag
     9361 cattcagaaa cgacgatcat ctccggtttc tgccatgctt taatcagacg attagtatcc
     9421 tggtgatggg taaagttacc gccacccgcc caccagatca ttttgatatt cggatacgtt
     9481 tgttctttac cgttatgctg atatttgcca ccaggatttt ccagcgcatc gacgatacgg
     9541 gcaacaggaa tcgccgtcat tccgccatca tcagcggcct cgctggcctg tccggcaatc
     9601 gccgcagaca tttccggcag cacgccgcca acacgcgtcg gattgccacc gttggagtaa
     9661 tgataagaga aaccaaaacc gccgcccggt gtaccaatct gccctaacat cgccgccagc
     9721 gtcaccagca tccagtgttt ctgttcacca tattgctggc gctgaattcc ccagccagcc
     9781 atcagcattg tgcgattcgc cgccatcagt tcagcgagtt tgactatctg cgcttccggt
     9841 acgccagtaa tttccgccgc ccaggccgcg ctcttcggag tattatcgct cttacctgtc
     9901 agatactctt caaactgcgg atacccggtg gtgtattttt caaggaacac tttatcgtgt
     9961 ttaccttgtg tcatcagggt atgcgcaatc cctaacatca gtgccacgtc ggtgcccata
    10021 ttcggcgcga tccaggtagc attatcacca aagaactcga tggtttcgga gcggatagga
    10081 tcaatggcaa tcactggttt gccagatttt ttcagctgat ggaagtattc cagcccttgc
    10141 tcatcggtac tgctccaggc aatttttaag gtattcagcg ggttcatccc ccacagcacc
    10201 acagcctggc tgttttccag aatcagcggc caggaggtct gctgttcata cacctctaca
    10261 gaaccgacca catgcggcat gatcacctgt gctgccccgg ttgaataatc gccgctatgc
    10321 ccggaataac cgcccgccag gttcatataa cgttgcagta aggtttgcgc tttatgcaac
    10381 acgccagaag agcgccagcc gtatgatccg gcaaaaatag cagatggtcc gttagctttg
    10441 cgaatgcgat cgtgttgctc atgaatcagt tttaatgctt gctcccagct cacctgtaca
    10501 taagtatctt cgccacgacc tttcgccggt tgcagtggat tatcgagata gctttttctt
    10561 accatcggat gctgaatacg tgccgtggtg tgtacctgat ccgccgccgt agactgtaag
    10621 gagttcggta tggttttcgc cagcgcgcct gttgaagaaa caatcttgcc gtccttcact
    10681 tctacgttca tcgctcccca acgtcccgcg gtgaggattt taccgccctt ctcttctgcc
    10741 catgcgggga gcggtgctgc cgatgtcacc accagcgctc cagcggcaat accgctgtgt
    10801 ttaataaatt cacgtcttgt taatgtcata acttcctccc tgatcaacga ggatcactgt
    10861 ttctcggtaa tatctttggc gttgtactgg aaataccgcg ttaaaatgtc cagttcgttt
    10921 tcgctcatgc tggttcgcgc acccattcct ttggcaatgg acggccatgc attgacggtg
    10981 taatggtcag cggcaatagg cgcatggcaa ccagcgcaat aggtatcgtc aagtttttca
    11041 gcgtattgcc atagcggttt acggtccgct aatgcgggat cggtaagcgc accctgtaaa
    11101 gacgcctgac gccattgatt gccgtattcg tcagcctgcc attccccgtt taccgtgagc
    11161 gccttgatac cttcttcact taatgtggct agcgccagcc gttgacctgc cgccaggtag
    11221 agcgtgtttt cactgccctg catttgataa ccctgcaaca gaacgatcgg ctgtttgcca
    11281 ctggcatcaa cgacggtgag atcggtacca ggattcacgg tagccagctc gcctatgcga
    11341 gaagttttga aaggataaat atgtgcgcca ttagtcactg aagtagcggc ctgactttcc
    11401 agctcatgcg ccgcgttgtc atccattttt atttctggcg gaaaatgggc aatgccttta
    11461 tgacaatcga tacaggtttc gccgcccttt tgtgctttgt tatgcatttt ctgcgcagat
    11521 tcactttgcg aggcaatatc catggcatca aaagaatggc aactacggca cgttgcagag
    11581 tcagttgctt ttaattcttt ccatactgtt tcggccattt cctggcgatg agtttcgaac
    11641 ttatcgtcac tgtctatttt gccgctaaca aattcatgat aaatatcttt agatgctttt
    11701 aatttagcaa ataaataatc catccctgac tttggaatat ggcaatctgc acattccgca
    11761 cgtatccctt tctggttcga aaagtggaca gttccctgat attcctcaaa aggtttactc
    11821 atcgagtggc aggaaaggca aaatgctgta tccgacgttt tatgtaaggc tttttgcgcc
    11881 agcaataacc cgccgccacc aaccacaacc gctatcagca aaaacaataa cccaatgcgt
    11941 tttttccctc gcatagattc ctctaaataa attccagaac accgaaatca ttgtataatt
    12001 aaatacacaa cgaattaacc gcttgcataa ctcggcacaa cactgcctga aataatcgat
    12061 aaagaatatg atttattaca atgtaatcat taa
//
LOCUS       DAPGWB010000135        12063 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.137, whole genome shotgun sequence.
ACCESSION   DAPGWB010000135 DAPGWB010000000
VERSION     DAPGWB010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12063
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.137"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..295)
                     /locus_tag="RHX79_003581"
     CDS             complement(<1..295)
                     /locus_tag="RHX79_003581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001446456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198707.1"
                     /translation="MLVNSWCNALNEAISTSATVCAEDLYKGGHWATAKAILNEYPID
                     LWVLSAGLGLLHHKDNVVPYKATFAVGYDESIPLYSQEYIGKSFHRTWWKEITN"
     gene            complement(907..1224)
                     /locus_tag="RHX79_003582"
     CDS             complement(907..1224)
                     /locus_tag="RHX79_003582"
                     /inference="COORDINATES: protein motif:HMM:NF024728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HDV2198708.1"
                     /translation="MSRHHSSHPLLHRRAGTILVYIIPLTPDRIDIEQPRRAGVGAGI
                     NVFASVNAAKGNGAEWTETTLDKGKTVTINSGRDMVLNGDQNVTQYVHLTFIRPNILM
                     NGD"
     gene            complement(1499..2520)
                     /locus_tag="RHX79_003583"
                     /pseudo
     CDS             complement(1499..2520)
                     /locus_tag="RHX79_003583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612074.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            2600..3136
                     /locus_tag="RHX79_003584"
                     /pseudo
     CDS             2600..3136
                     /locus_tag="RHX79_003584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001504106.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="enterotoxin"
     gene            complement(3582..4166)
                     /locus_tag="RHX79_003585"
                     /pseudo
     CDS             complement(3582..4166)
                     /locus_tag="RHX79_003585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001411067.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(4294..5325)
                     /locus_tag="RHX79_003586"
     CDS             complement(4294..5325)
                     /locus_tag="RHX79_003586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDV2198709.1"
                     /translation="MEKTRKRRGTGRVTLQEVANFAGVGTMTVSRALRTPEQVSDKLR
                     EKIEQAVEELGYIPNRTAGALASGHSDTVAVLVPSLTDKASSRFMQSLQQVLNKNEFQ
                     LLLGCHEYNQLKEAEILMTLLQGNPAALVIFGSQLADKTHQILEKTNIPTINVVGSPF
                     SPAQITIETAFFEASHKLTEHLLEQGYKNIGFIGAHMENRLQRQQLNGWHKAMLSHYQ
                     NTDLVITMPDAASLQLGRYALNEILLRQPELDAVICSHEEIALGIMFECQRRLLKIPG
                     NIAVACLDGSDSCDQTHPTLTSIRIDYKKMGIETGKLLIGLLNNNHDESEESRIVQFN
                     YQIELRQST"
     gene            5596..6039
                     /locus_tag="RHX79_003587"
     CDS             5596..6039
                     /locus_tag="RHX79_003587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001497294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDV2198710.1"
                     /translation="MLKNLLNTEVVQVVEQVKDWREAVAISCRPLIENGSIEPRYVDA
                     IYHSHDTIGPYYVVGPGIAMPHARPEEGANKLSLALTLIPSGVNFDADENDPVKLLIV
                     LAATDSTSHIEAISQLAKLFDNEKDIQAILTAKTTQDILSVIARY"
     gene            6055..6342
                     /locus_tag="RHX79_003588"
     CDS             6055..6342
                     /locus_tag="RHX79_003588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004717867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDV2198711.1"
                     /translation="MKITVVCGNGLGTSLMMEMSIKSILKDLSVSADVDHVDLGSAKG
                     TPSDIYVGTKDIAEQLAAQSVAGKIVALENMIDKKAMRERLSVVLTELGAL"
     gene            6355..7611
                     /locus_tag="RHX79_003589"
     CDS             6355..7611
                     /locus_tag="RHX79_003589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011815933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HDV2198712.1"
                     /translation="MDFFRFLMSDVLSEPAVLVGLIALIGLIAQKKPVTECIKGTVKT
                     IMGFVILGAGAGLVVSSLGDFANIFQHAFGIQGVVPNNEAIVSVAQKSFGKEMAMIMF
                     FAMVINIMIARFTPWKFIFLTGHHTLFMSMMVAVILATAGMTGITLIAVGSLVVGVAM
                     VFFPAIAHPYMKKVTGSDDVAIGHFSTLSYVLAGFIGSKFGNKEHSTEDMNVPKSLLF
                     LRDTPVAISFTMSIIFLVTCLFAGADAVKELSGGKNWFMFSIMQSITFAAGVYIILQG
                     VRMVIAEIVPAFKGISDKLVPNARPALDCPVVFPYAPNAVLVGFLSSFAAGLIGMFTL
                     YLLNMIVIIPGVVPHFFVGAAAGVFGNATGGRRGAILGAFAQGLLITFLPVFLLPVLG
                     DIGFANTTFSDADFGALGILLGIIVR"
     gene            complement(7827..8111)
                     /locus_tag="RHX79_003590"
     CDS             complement(7827..8111)
                     /locus_tag="RHX79_003590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001751479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV2198713.1"
                     /translation="MEQKTLSVEPRRSFSNEFKLQMVKLALQPRGSVARIAREHDIND
                     NLLFKWLRLSLIKGRISRRLPVTNSSGIGVELLPVEMTLDERPYPVFYAR"
     gene            complement(8533..9546)
                     /locus_tag="RHX79_003591"
     CDS             complement(8533..9546)
                     /locus_tag="RHX79_003591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020245959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
                     /protein_id="HDV2198714.1"
                     /translation="MSTRINLWRALFGEKPRILLENSDFTVTSFRYDSGVEGLKIANS
                     RGHLIILPWMGQMIWDAQFDGHGLTMCNMFRQPKPATEVIETYGCFAFHSGLLANGCP
                     SAEDTHLLHGEMACAAMDEAWLELDGDMLRLNGRYEYVMGFGHHYLAQPTVVLHKSST
                     LFDIKMAVTNLASVDMPLQYMCHMNYAYIPNATFSQNIPDEILRLRESVPSHVNPTAQ
                     WLAFNQRIMQGEASLSTLSQPEFYDPEIVFFADKLDAYTDQPEFRMISPDGTTFVTRF
                     YSAELNYVTRWILYNGEQQVAAFALPATCRPEGYLAAQRNGTLIQVAPQQTRTFTVTT
                     GIE"
     gene            complement(9558..10874)
                     /gene="fucP"
                     /locus_tag="RHX79_003592"
     CDS             complement(9558..10874)
                     /gene="fucP"
                     /locus_tag="RHX79_003592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HDV2198715.1"
                     /translation="MNDKNIIQMPDGYLNKTPLFQFILLSCLFPLWGCAAALNDILIT
                     QFKSVFSLSNFASALVQSAFYGGYFLIAIPASLVIKKTSYKVAILIGLTLYIGGCTLF
                     FPASHMATYTMFLAAIFAIAIGLSFLETAANTYSSMIGPKAYATLRLNISQTFYPIGA
                     ASGILLGKYLVFSEGESLEKQMSGMNAEQIHNFKVLMLENTLEPYKYMIMILVVVMVL
                     FLLTRFPTCKVAQTSHHKRPSAMDTLRYLARNPRFRRGIVAQFLYVGMQVAVWSFTIR
                     LALELGDINERDASNFMVYSFACFFIGKFIANILMTRFNPEKVLILYSVIGALFLAYV
                     ALAPSFSAVYVAVLVSVLFGPCWATIYAGTLDTVDNEHTEMAGAVIVMAIVGAAVVPA
                     IQGYIADMFHSLQLSFLVSMLCFVYVGVYFWRESKVRTALAEVTAS"
     gene            complement(10902..11822)
                     /gene="rbsK"
                     /locus_tag="RHX79_003593"
     CDS             complement(10902..11822)
                     /gene="rbsK"
                     /locus_tag="RHX79_003593"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDV2198716.1"
                     /translation="MDIAVIGSNMVDLITYTNQMPKEGETLEAPAFKIGCGGKGANQA
                     VAAAKLNSKVLMLTKVGDDIFADNTIRNLESWGINTTYVEKVPCTSSGVAPIFVNANS
                     SNSILIIKGANKFLSPEDIDRAAEDLKKCKLIVLQLEVQLETVYHAIEFGKKNGIEVL
                     LNPAPALRELDMSYACKCDFFIPNETELEILTGMSVDTYDHIRLAARSLVDKGLNNII
                     VTMSEKGALWMTRDQEVHVPAFKVNAVDTSGAGDAFIGCFSHYYVQSGDVEAALKKAA
                     LFAAFSVTGKGTQSSYPSIEQFNEFLTLNE"
BASE COUNT         3282 a         2743 c         2721 g         3317 t
ORIGIN      
        1 tattagttat ttctttccac catgttctgt gaaaactttt tcctatatat tcttgtgaat
       61 acaatggtat tgattcatca tagcccacag caaaggtcgc tttatacggt actacattgt
      121 ctttgtggtg gaggaggcct aaaccggcag aaagaaccca taaatcaata gggtattcat
      181 ttaagatcgc tttagctgtc gcccagtgcc cacctttata aagatcttct gcacatacag
      241 ttgcagatgt agatatcgct tcattcagag cattgcacca agaattcacg agcacatttg
      301 aagggggccg gcctgatgaa aattgactca gactcaatat atccccacta tcgtagtgtt
      361 taccgtttgt acatgttgtt attaagttga tattgctcac aatcgccccc ctaaatcgtg
      421 ctacacaagc tacaggagaa aaaaggggat gacaagaacg gaattatcag tccctgaaaa
      481 atttttcagg gactgatgct agtgaggaat atactcgaaa tactcatctt gagaatgaga
      541 acacttttgg catcgcctca gaataccttt ttcctcaaga gagagacaaa aattgcgaca
      601 tgattcaaga aggtcgtcag gattttcatt tttattttta gaaatcaagg ctctagcgag
      661 tgtgtcataa ctaaaacctc ccgttgagtg cgatacaatg ctcatcgcaa gttgggtatc
      721 gaaagttttc atagtgcacc tctgagccgc cagaataata cagttataaa aaagtatggg
      781 ttatagttca agctggcttt tcaaattcga atatagcaag catcaggaat tagactacat
      841 gccaaagtca taaggactaa cttccctttt cctattcaca tccaaaaatc agcccactac
      901 tgcagctcag tcgccgttca tcaatatgtt cggccttatg aacgtaagat gtacgtactg
      961 agttacgttc tgatcaccgt tcagcaccat gtcccgacca ctgttgatgg tgacggtttt
     1021 acctttgtcg agggtcgttt cggtccattc agcaccgttg ccttttgctg cattaacact
     1081 agcaaagacg ttgataccgg caccgacgcc agcccgtctt ggttgttcta tgtcgattct
     1141 atctggcgtc agggggatta tataaaccag tatggtcccg gcacgccggt gcagcagtgg
     1201 atgactactg tgatgccgag acatacagct ctattgtaat ataagggctt ccccggcatg
     1261 tcaacgccgg tgtttatggt ttctgtctgc tcttcagtaa aaataaaggg gagagacaac
     1321 agaacgataa atggccatga tgagtcgtca tcgactcgga ccttgatgaa agacgcgcgt
     1381 gaggttcttc ttcgttaagc ggatacgtat attctgtaca atagccagat aggcctcacg
     1441 gggtctaacc ctttatcatc aacgaattga cggtcacatg ggtattttgt tttgtgcttt
     1501 agctggctga gtacagcctg aaattatcac tgtaatgcaa tgatgcccag cacagccttg
     1561 cgtttttggc ggtgatctct acaacggtac gccagtatcc tctgcgctcg accagtgatc
     1621 agccccaacg actgaatgaa tcagtccttt tttcggcacc aatcagaacc gaacgccccc
     1681 ctgaaccagc agaattcgca gatacgtatc gccagcttta gttatcctgc caagcgttga
     1741 tttcccacta ctgctgtatt gcgatagtgt tagtcccagc caagttgcca gttgtcgctc
     1801 attttaaaat cgtgtgcatt tccgataatg gcgaccagcg cacaggccgt tgtggtacta
     1861 atccctttca gttccattag tcgctgactg cggtgatctg cttttgccat gcgggacaaa
     1921 accggtcata ttcagtaata ttatcttcaa tacgatcaat gtgtaccagc aggtcatgaa
     1981 cgtattgttg aacctgaagt ggcaaaaaac tcttctgctc agaaaacata tgacgaaggg
     2041 catctgtact ttgtggggcg atgacactga attccgatat caaacctctc aatcggttat
     2101 atgttgctgt tttctcttcg ataaaaccct gtctggtacg gtgtaggcat tgcatcgcct
     2161 gctggttctc atccttcact gttacaaacc gcatatgtgg gcgacgaact gcttcacaga
     2221 tagcctgagc attatttgcg tcatttttgc ctgatttacc agccatgcga taaggagata
     2281 caaatttagc aaccatcaga cgtggttcat gaccatattg tcgaaacaac cttgtccagt
     2341 agtgagcccc ggagtatacc tccatcccga taacacagag aggtaaactg gcaatcagct
     2401 aaggaatggt agtatccgat attttggggt ttaaccagaa tagtttttac cgtgttagtc
     2461 aacgcagtga gcagcgaaca catttttaac aagatcgata ccgacagtcg tgatggtcat
     2521 aacgaatccc tccggggcta tgtttacccc atgattgcat aagagttaat caggcgcata
     2581 tcttggggaa gcccttttca ttcgtaaagg cccgctgttc ccgctgaatt cgctgatgta
     2641 ccatgggata gccagcgccg agaatgccta ttatggacta gaaaaagagc aaacggaccg
     2701 cgattttttc gattaggtct ggacctactt cgtgaccagc acctaactgc aggagctgta
     2761 tattacccca tctgtgctga aaaaggtgaa gtgggatacg ttggcgaagg tcgcaaaatg
     2821 gttgaaggaa aatgccagcg tgctggttga tacccactgg gttggtggtg actcgacggc
     2881 gcttgccatg tacgactggc catcttggaa caaagacaaa gccattcttg gtttgcgcaa
     2941 cccgtcggat aagccacaaa cctactacct agagttagcg aaggatttcg aaataccaac
     3001 aggatacgcg gcgcaggtta gtctgaaagc ggtatatggc attaataaaa ccttgcccgt
     3061 tgagtataaa aacgcaacag tgattacgtt gcaggcactg gaaacgctgg tgtttgaggc
     3121 gatacccgtt aactaaacgc ctgtacctat gagtaggccg gctaaggcac agcctactcg
     3181 gcaagaccag ctacagggat ttactccccc tgctgcgcaa gcgccttttt cattggcaat
     3241 tcggcctata gctacgcgtc ggcaggcaga ccaacgaggc gctcaaggcg gcaattgccg
     3301 cacatgactc aggtagcggc attatacagt tgcctagata tccagatacc cgcttcgtga
     3361 aaagtacgta tcagatgata gcttggatcg ttaataacga tatcaggaat gaagtctcac
     3421 tgctattgct gccggtgagg atgtcgttcc tgcttcagag ttggcaactg ctataaaaca
     3481 aataaaagat ggttacctat gcagggttcc agaatacttg gttctgacat attaaatctc
     3541 tcggatggga ttttatcggt cgtatcagag gtaacattca gctacgtatt gaaagtaaag
     3601 gacaatactg gttcaggtgt cattgtttta tcgtcagttc gtaaacgtcc gatagcgatg
     3661 atgtgaagtg cactatttgc agcacgctcc ccaccccgat taagtcggta acggttcatt
     3721 tttttagaag atacggtaac cgagttgaca ccacacagca ccgcaaaacc tgattctatt
     3781 cttagccgtt ggggattatc tccggcagtg atgagcaact gcgaagcgct ttcgtatcca
     3841 acagcattac gtttaatcag ttcagatgcc agttcatcga caattgccgc aatcatgaca
     3901 tcaaggtcgg cgatttcatc atgtaactcg aaatagcgtc aggcaagtga tttcaatgca
     3961 atgcgataaa cgttggtaac attacgatat tcactggcac taggcttcca ggatcccgga
     4021 gtcctgataa gttgcatatg tgtcatattt ctgagttgtt cgcgtaattc atccggtgca
     4081 gagataatat aggaatggat aatctggaga tggagagcga ctctgcgggc tgatactgcg
     4141 gtgttgcggc aagtttttag catccgcttc tacgccaaat acctgaagta ggaatggatg
     4201 cgttagcagc acacatccgg atctgcgcgg ggaatagccg gaaacggcta tccctaccac
     4261 aatagctaac tttgcaatag tgccctttta ggctcatgta ctctgacgta attctatctg
     4321 gtagttgaat tgcacgatac gcgactcttc tgattcatca tgattattat tcaatagtcc
     4381 aatcagtaac ttacccgtct ctatccccat ttttttgtag tcaatacgga tggatgtcaa
     4441 ggttgggtgt gtttgatcgc aactgtctga accgtcaaga caagctacag cgatatttcc
     4501 agggattttt aacaaacgcc gctgacactc aaacatgata cccagcgcaa tctcttcgtg
     4561 gctgcaaatc acagcatcca actctggttg tcgcagtaat atctcgttta atgcgtaacg
     4621 ccccaattgc agacttgcgg catccggcat tgtgataaca agatcagtgt tctggtaatg
     4681 gctcagcatt gctttatgcc agccgttcag ttgctgacgt tgcaggcggt tttccatatg
     4741 cgcaccgata aatccgatat tcttataacc ctgctccagc agatgttcgg tcagtttatg
     4801 tgatgcttca aaaaatgctg tttcgatggt aatttgagcc ggactgaaag gggaaccgac
     4861 aacgttaatg gtaggtatat ttgttttctc gagtatctgg tgagttttat cagccaactg
     4921 agaaccaaaa ataactaacg ccgccgggtt gccttgaaga agcgtcatca gaatttcagc
     4981 ttctttgagt tgattatact catgacaccc aagcagtagc tggaattcat ttttattaag
     5041 cacctgctgc aacgactgca taaagcggga gctggcttta tctgtcaggg aaggaaccag
     5101 tacggcgact gtatcactgt gaccagatgc aagggcgcca gcagttctgt tgggaatata
     5161 acccaactct tctacggcct gttctatctt ttccctcagc ttgtcagaaa cctgttccgg
     5221 tgttctcagc gcgcgggaaa cggtcatggt tccgacacct gcaaagttag cgacctcctg
     5281 cagcgtcacc cgtccggtac cacggcgctt acgtgttttt tccatttcga ctccatggat
     5341 aattacaacc agctgttttc attactttta tttcaccatt actctttcca gtttttgccc
     5401 acggtagcaa atatcctgtt gcattgtata tgcaggaacc gaatatagcc aaagcatggc
     5461 ggcagaaaaa tgatagcgct atcacaaaga ttggtagcgt tatcagatag cgctatcaaa
     5521 tgcgacaatc atcacattaa ttaatgcgta aaatatctac tctcctgtta attatcatcg
     5581 ggagttatca gtagcatgtt aaaaaatcta ttaaatacag aggtcgttca ggtcgtggaa
     5641 caggtcaaag actggcggga agccgtggcg atttcatgcc gaccgttgat tgaaaacggc
     5701 tctatcgaac cgcgttatgt tgatgcgatc tatcactcgc acgacactat cggtccgtac
     5761 tatgtggttg gccctggtat tgcgatgcct catgcgcgcc cggaagaggg ggctaacaag
     5821 ctgtcattag cactgaccct gatcccttca ggtgtgaatt ttgatgccga tgaaaacgat
     5881 ccagtgaaat tactgattgt gctggctgca accgacagta ccagccacat tgaagcgatt
     5941 tctcaactcg ccaagttatt cgataacgaa aaagacatac aggccatttt gacggccaaa
     6001 acgacgcagg acattttgtc tgttattgcg cgctattaat ccagaggaac atttatgaaa
     6061 attacagtgg tttgcggtaa cggcttaggc accagcctga tgatggaaat gagcattaaa
     6121 agcattttga aggatttgtc cgtcagcgct gatgttgatc acgtcgacct gggctccgcg
     6181 aaagggacgc cgagtgatat ctatgtcggc accaaagaca ttgccgagca gttagccgcg
     6241 cagtctgtcg caggcaaaat cgtcgcactg gaaaatatga ttgataagaa agccatgaga
     6301 gaacgtttgt ccgtggtatt aaccgaatta ggcgcactgt aagctggggg cgatatggat
     6361 ttctttcgtt ttttgatgag cgatgtactt tccgaacccg cagtgctggt cggtttaatc
     6421 gccctgattg gcctgattgc acagaaaaaa ccggtaaccg aatgtattaa aggtaccgtc
     6481 aagaccatta tggggtttgt gattttaggc gcaggggcgg gtttagttgt gtcgtcactg
     6541 ggtgacttcg caaacatttt ccagcatgcc tttggtattc agggtgtagt gccgaacaat
     6601 gaagccattg tttccgtagc gcagaaaagc ttcgggaaag aaatggcgat gattatgttc
     6661 tttgcgatgg ttatcaacat tatgattgcc cgtttcacac cgtggaaatt tatcttcctg
     6721 accggtcatc acacgttgtt tatgtcgatg atggtagcgg taattctggc aacagcaggc
     6781 atgaccggca ttacgcttat agccgttggc tctttggttg ttggcgtggc aatggtcttt
     6841 ttcccggcta ttgcgcatcc gtacatgaag aaagtgaccg gttctgatga cgttgccatc
     6901 ggccacttct caacattatc ttatgtattg gccggtttca tcggcagcaa gtttggtaat
     6961 aaagagcact cgactgaaga catgaatgtg ccgaaaagtc tgctgttctt gcgcgacacg
     7021 ccggttgcta tctcttttac catgagcata attttcctgg tgacgtgcct gtttgcgggt
     7081 gcagatgcgg tgaaagagct tagcggtggt aaaaactggt tcatgttctc tatcatgcaa
     7141 tccattacct tcgcagctgg cgtgtacatc attctgcagg gtgtgcgcat ggtgattgcg
     7201 gagattgtcc cggcattcaa aggtatttca gacaagctgg ttccgaatgc cagacctgct
     7261 ctcgattgcc cggtcgtctt cccttacgca cctaacgctg tactggttgg tttcctgagt
     7321 agctttgctg caggtttaat cggtatgttc acgttgtatc tgctgaacat gatcgtgatt
     7381 attcctggtg tggtgccgca cttcttcgta ggtgcagctg caggggtatt cggtaatgca
     7441 acgggtggac gtcgtggtgc gattttgggt gccttcgctc agggcttgct tattaccttc
     7501 ctgccagtat tcttattgcc ggtgctgggt gatattggtt ttgctaacac caccttcagt
     7561 gatgctgact ttggcgcact gggtattttg ttagggatta tcgttcgcta atattttgat
     7621 gacattaata tcctccagga tttcaggaac gtggaggata ttaattcctc ttattttctc
     7681 catttttctt tcttccagtc aggactgcat ccgattaatc gtaagcgctc cgagaagtac
     7741 gtagcgtaag gattatttta cagctgagaa gtttcagtgc agcagttcat gcacacggtt
     7801 cgacggctag tcattgatct tcataattac ctcgcgtaaa aaacggggta aggccgctca
     7861 tccagcgtca tctccacagg taataattca acgccaatgc cagaagagtt cgttaccgga
     7921 agacgccgtg atatacgccc tttgatcagc gagagcctga gccatttgaa cagaagatta
     7981 tcattgatat catgctcccg ggcaatacgg gcaacagaac cccttggttg taaagccagt
     8041 ttaaccattt gaagtttaaa ctcatttgaa aatgacctgc ggggttcaac tgataatgtt
     8101 ttttgttcca taacaggtgt ccactagttg aaaaggtggg tacctatgtt accaatactg
     8161 gcttaatggc tacatacagc agtcggttta cgcatacact tttatagtgc actccggcct
     8221 catgaatata acggtggatt accgccgaac gaatcggaaa atagatactg gaaaaaaact
     8281 gaaattgtga ccagtttttg ttgaccacta caaataaata aaagagttgc agtgcttgct
     8341 cggtaagaaa acaatggagg ttaagctcct caaagaagct gtggagtaca ccactctaca
     8401 gtagttgcgc aaatttggag tggacgataa tgtgatcgtc tataagggca acgctatcat
     8461 agtcttgtcc tggcgggtaa aaaaacgcgc ttaccttaac gataagcgcg ccgctgttca
     8521 ggccttgagt ggttattcaa ttcctgtggt gactgtaaaa gtgcgcgttt gctgcggtgc
     8581 aacctgaatc agcgtgccat tacgttgcgc ggcaagatac ccctcaggcc gacaggttgc
     8641 aggtaatgca aaggcggcta cctgttgctc tccgttataa aggatccagc gtgtcacata
     8701 atttagttca gcactgtaga aacgagtaac aaacgtagtg ccatcgggag agatcatgcg
     8761 aaactctggc tgatctgtat aagcgtccag tttgtctgca aagaagacaa tttctggatc
     8821 ataaaattcc ggttgactca gcgtcgacag agaggcttct ccctgcataa tccgttgatt
     8881 aaacgccagc cactgagcgg tgggattaac atgcgaaggc actgattcac gcaatcttaa
     8941 tatttcgtcc gggatattct ggctgaatgt agcatttggt atatatgcat aattcatgtg
     9001 gcacatatat tgtagtggca tatctacaga agccagattg gttacggcca tcttaatatc
     9061 gaacagtgta gaggatttgt gaaggaccac tgttggctga gccagataat gatgaccgaa
     9121 acccattaca tactcgtaac gcccgttaag gcgtaacata tctccgtcta attccagcca
     9181 tgcttcatcc atcgcggcac aggccatttc accgtgtagc agatgagtat cttccgcaga
     9241 tgggcagcca ttagccagca aacctgaatg aaaagcaaaa cagccatagg tctctatcac
     9301 ctctgtcgcc ggtttaggct ggcgaaacat attgcacatg gtgaggccgt gtccatcaaa
     9361 ttgcgcatcc caaatcatct gccccatcca gggaagaata atcaaatgtc cacgactgtt
     9421 tgcaatttta agcccctcga caccgctgtc atatcgaaaa gacgtgacag taaaatcact
     9481 attttccagc aagatacgag gtttctcgcc aaaaagcgcc cgccacaaat taatacgcgt
     9541 actcataacg gttctcctca ggacgctgtg acttcagcca gtgcggtacg tactttgctt
     9601 tcacgccaga agtagactcc gacatagaca aagcagagca tagaaaccag gaatgaaagc
     9661 tgtagtgagt ggaacatatc tgcaatatat ccctgaattg ccggaaccac cgcggcaccg
     9721 acaatagcca taacaatgac tgctcctgcc atttctgtat gttcgttatc aactgtatcc
     9781 agtgttcctg catagatcgt cgcccagcaa gggccaaaca aaacacttac caggacggcg
     9841 acatagaccg cgctgaaact tggagccagt gcaacatatg ccaggaacag cgcccctata
     9901 acggaataga gaatcaatac tttttccgga ttaaaacgcg tcataaggat attggctata
     9961 aacttgccaa taaagaagca ggcaaagcta tagaccatga agtttgaagc atcacgttcg
    10021 ttgatatcgc ccaactccag cgccagacgg atggtaaatg accatactgc gacctgcata
    10081 cccacataaa ggaactgcgc cacaataccg cgacgaaagc gcggatttct agccagatag
    10141 cgcagcgtat ccattgctga cgggcgttta tggtgacttg tctgtgccac tttacaggtt
    10201 gggaagcggg ttaaaaggaa caacaccatg accacaacca gaatcataat catatactta
    10261 tacggttcaa gggtgttctc taacatcagc accttaaagt tgtgaatttg ctcggcgttc
    10321 attcctgaca tctgcttttc aaggctttcc ccctcggaga aaaccagata tttgcccaat
    10381 aaaataccag acgcagcacc aatcggataa aaggtctggc tgatattgag ccgcaatgtg
    10441 gcataggctt ttggaccgat cattgaactg tatgtgttcg ctgcagtttc aaggaaactc
    10501 aggccaatcg caatcgcaaa aatagctgca aggaacatag tgtaggttgc catatgcgag
    10561 gcagggaaaa aaagtgtaca accaccaata tacagcgtca ggccaattaa aattgccacc
    10621 ttataactgg tctttttaat cacaagggat gctggtattg caattaaaaa ataacctcca
    10681 taaaatgcgc tctgcaccaa tgctgaagca aagttactta gcgaaaatac acttttgaat
    10741 tgagtgatta atatgtcatt taatgcagct gcgcatcccc atagcgggaa taaacacgat
    10801 aacaaaataa actggaacaa gggagtctta ttcagatacc catcaggcat ctgaatgatg
    10861 tttttatcgt tcatagtgct acctttaact gtgcaggatg attattcgtt taaggttaaa
    10921 aattcattaa attgttcaat actcggataa gatgattgcg tacctttccc tgtgacgctg
    10981 aaagcggcaa agagagcggc ttttttcaaa gcggcttcaa catcaccgct ttgaacataa
    11041 taatgggaaa agcaaccaat aaatgcgtca ccagcgccac tagtatcaac agcatttact
    11101 ttgaatgcag gaacatggac ttcctgatcg cgggtcatcc ataatgcgcc tttttcgctc
    11161 atggtaacaa taatattgtt cagcccttta tcaactaacg aacgtgcggc caaacgaata
    11221 tgatcataag tatcaaccga cataccggtt aatatttcca gttctgtttc attcgggata
    11281 aagaaatcac atttgcaggc ataagacata tctaactcac gcaatgccgg agccggattt
    11341 aataacactt caataccatt tttcttacca aactcaatcg cgtggtaaac tgtttccagt
    11401 tgaacttcca gttgtaaaac gatcaatttg cattttttca gatcttctgc agctcgatcg
    11461 atatcttccg gggaaagaaa tttattcgct cccttaatta ttaatatact attgctcgag
    11521 ttggcattaa caaagatcgg tgcaacacca ctgctggtac aggggacttt ctcaacataa
    11581 gtggtattaa ttccccatga ttcgagatta cgaatagtat tatccgcaaa aatatcatca
    11641 cctactttag tcagcatcag gacttttgaa ttcaatttag ccgccgccac cgcttgatta
    11701 gcacctttcc caccacatcc gattttgaag gcaggtgctt ccagagtttc tccttcttta
    11761 ggcatctgat tagtgtaagt aatgagatcc accatattgg aaccaataac tgcaatgtcc
    11821 atttcactac ctcttataaa ctttcgcata acaatggtat ttaaataaca ttagcatgtt
    11881 acttttgcat catttgtgac tgagatcgcg attagcacat caacccgatg tttatttaat
    11941 agacttccag tcttatcact caggccaaca ctatctaatc ataagcaacc taacaggatt
    12001 aataccgaaa attcagcagt ctataccctt ttcatttcaa agggtcggtc gtatagtatg
    12061 gta
//
LOCUS       DAPGWB010000136        11972 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.138, whole genome shotgun sequence.
ACCESSION   DAPGWB010000136 DAPGWB010000000
VERSION     DAPGWB010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11972)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11972)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11972
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.138"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            249..1637
                     /gene="narU"
                     /locus_tag="RHX79_003594"
     CDS             249..1637
                     /gene="narU"
                     /locus_tag="RHX79_003594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite transporter NarU"
                     /protein_id="HDV2198717.1"
                     /translation="MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLL
                     LAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRW
                     TVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAK
                     QGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWV
                     PLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFA
                     MLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLF
                     LTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQA
                     QKEAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLT
                     WLVYGRRKFSQK"
     gene            1719..5459
                     /gene="narZ"
                     /locus_tag="RHX79_003595"
     CDS             1719..5459
                     /gene="narZ"
                     /locus_tag="RHX79_003595"
                     /EC_number="1.7.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase Z subunit alpha"
                     /protein_id="HDV2198718.1"
                     /translation="MSKLLDRFRYFKQKGETFADGHGQVMHSNRDWEDSYRQRWQFDK
                     IVRSTHGVNCTGSCSWKIYVKNGLVTWEIQQTDYPRTRPDLPNHEPRGCPRGASYSWY
                     LYSANRLKYPLIRKRLIELWREALKQHSDPVLAWASIMNDPQKCLSYKQVRGRGGFIR
                     SNWQELNQLIAAANVWTIKTYGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFY
                     DWYCDLPPASPMTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
                     KTIAITPDYSEVAKLCDQWLAPKQGTDSALAMAMGHVILKEFHLDNPSDYFINYCRRY
                     SDMPMLVMLEPRDDGSYVPGRMIRASDLVDGLGESNNPQWKTVAVNTAGELVVPNGSI
                     GFRWGEKGKWNLESIAAGTETELSLTLLGQHDAVAGVAFPYFGGIENPHFRSVKHNPV
                     LVRQLPVKNLTLVDGNTCPVVSVYDLVLANYGLDRGLEDENSAKDYAEIKPYTPAWGE
                     QITGVPRQYIETIAREFADTAHKTHGRSMIILGAGVNHWYHMDMNYRGMINMLIFCGC
                     VGQSGGGWAHYVGQEKLRPQTGWLPLAFALDWNRPPRQMNSTSFFYNHSSQWRYEKVS
                     AQELLSPLADASKYSGHLIDFNVRAERMGWLPSAPQLGRNPLGIKAEADKAGLSPTEF
                     TAQALKSGDLRMACEQPDSGSNHPRNLFVWRSNLLGSSGKGHEYMQKYLLGTESGIQG
                     EELGASDGIKPEEVEWQTAAIEGKLDLLVTLDFRMSSTCLFSDIVLPTATWYEKDDMN
                     TSDMHPFIHPLSAAVDPAWESRSDWEIYKGIAKAFSQVCVGHLGKETDVVLQPLLHDS
                     PAELSQPCEVLDWRKGECDLIPGKTAPNIVAVERDYPATYERFTSLGPLMDKLGNGGK
                     GISWNTQDEIDFLGKLNYTKRDGPAQGRPLIDTAIDASEVILALAPETNGHVAVKAWQ
                     ALGEITGREHTHLALHKEDEKIRFRDIQAQPRKIISSPTWSGLESDHVSYNAGYTNVH
                     ELIPWRTLSGRQQLYQDHPWMRAFGESLVAYRPPIDTRSVSEMRQIPPNGFPEKALNF
                     LTPHQKWGIHSTYSENLLMLTLSRGGPIVWISETDARELTIVDNDWVEVFNANGALTA
                     RAVVSQRVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSVTRVCPKPTHMIGGYAQL
                     AWGFNYYGTVGSNRDEFIMIRKMKNVNWLDDEGRDQVQEAKK"
     gene            5456..7000
                     /gene="narH"
                     /locus_tag="RHX79_003596"
     CDS             5456..7000
                     /gene="narH"
                     /locus_tag="RHX79_003596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HDV2198719.1"
                     /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTGREGMEYAWFNNV
                     ETKPGIGYPKNWEDQEEWQGGWVRDVNGKIRPRLGSKMGVITKIFANPVVPQIDDYYE
                     PFTFDYEHLHSAPEGKHIPTARPRSLIDGKRMDKVIWGPNWEELLGGEFEKRARDRNF
                     EAMQKEMYGQFENTFMMYLPRLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRG
                     WRLCISGCPYKKIYFNWKSGKSEKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYDA
                     DRIEEAASTEREVDLYERQCEVFLDPHDPSVIEEALKQGIPQNVIEAAQRSPVYKMAM
                     DWKLALPLHPEYRTLPMVWYVPPLSPIQSYADAGGLPKSEGVLPAIESLRIPVQYLAN
                     MLSAGDTGPVLRALKRMMAMRHYMRSQTVEGVTDTRAIDEVGLSVAQVEEMYRYLAIA
                     NYEDRFVIPTSHREMAGDAFAERNGCGFTFGDGCHGSDSKFSLFNSSRIDAINITEVR
                     DKAEGE"
     gene            7000..7695
                     /gene="narW"
                     /locus_tag="RHX79_003597"
     CDS             7000..7695
                     /gene="narW"
                     /locus_tag="RHX79_003597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HDV2198720.1"
                     /translation="MQILKVIGLLMEYPDELLWECKEDALALIRRDAPMLTDFTHNLL
                     NAPLLDKQAEWCEVFDRGRTTSLLLFEHVHAESRDRGQAMVDLLAEYEKVGLQLDCRE
                     LPDYLPLYLEYLSVLPDDQAKEGLLNVAPILALLGGRLKQREAPWYALFDALLQLAGS
                     SLSSDSVTKQVNSEERDDTRQALDAVWEEEQVKFIEDNATACDSSPLNQYQRRFSQDV
                     APQYVDISAGGGK"
     gene            7692..8372
                     /gene="narI"
                     /locus_tag="RHX79_003598"
     CDS             7692..8372
                     /gene="narI"
                     /locus_tag="RHX79_003598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HDV2198721.1"
                     /translation="MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQML
                     DKRGMVIWSNLFHIGILGIFFGHLFGMLTPHWMYAWFLPVAAKQLMAMVLGGICGVLT
                     LIGGAGLLWRRLTNQRVRATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKL
                     VGWAQSIVTFRGGSSEMLNGVAFVFRLHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRR
                     YQIVRSRR"
     gene            8451..9344
                     /locus_tag="RHX79_003599"
     CDS             8451..9344
                     /locus_tag="RHX79_003599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family isomerase"
                     /protein_id="HDV2198722.1"
                     /translation="MKPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGH
                     SETAFLLHSDDSDVRIRYFTPTVEVPICGHATVAAHYVRAKVLGLGNCTIWQTSLAGK
                     HRVTIEKHNDDYRISLEQGTPGFEPPLEGETREAIINALHLTEDDILPGLPIQVATTG
                     HSKVMIPLKPEVDIDALSPDLAALSAISKQIGCNGFFPFQIRPGKNETDGRMFSPAIG
                     IVEDPVTGNANGPMGAWLVHHNVLPHDGKVLRVKGHQGRALGRDGVIEVTVTIRDNQP
                     EKVTISGTAVILFHAEWVIEI"
     gene            complement(9440..10285)
                     /gene="nhoA"
                     /locus_tag="RHX79_003600"
     CDS             complement(9440..10285)
                     /gene="nhoA"
                     /locus_tag="RHX79_003600"
                     /EC_number="2.3.1.118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-hydroxyarylamine O-acetyltransferase"
                     /protein_id="HDV2198723.1"
                     /translation="MTPILNHYFARINWSGAAAVNIDTLRALHLKHNCTIPFENLDVL
                     LPREIQLDDQSLEEKLVIARRGGYCFEQNGVFERVLRELGFNVRSLLGRVVLSNPPAL
                     PPRTHRLLLVELEEEKWIADVGFGGQTLTAPIRLVSDLVQTTPHGEYRLLQEGDDWVL
                     QFNHHQHWQSMYRFDLCEQQQSDYVMGNFWSAHWPQSHFRHHLLMCRHLPDGGKLTLT
                     NFHFTHYENGHAVEQRNLPDVVSLYAVMQEQFGLGVDDAKHGFTVDELALVMAAFDTH
                     PEAGK"
     gene            10458..11027
                     /locus_tag="RHX79_003601"
     CDS             10458..11027
                     /locus_tag="RHX79_003601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415979.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HDV2198724.1"
                     /translation="MSRFIPIELHHASRLLNHGPTVMITSFDEQSQRRNIMAAAWSMP
                     VEFEPPRVAIVVDKSTWTRELIERNGKFGIVIPGVAATNWTWAVGSVSGREEDKFNCY
                     GIPVVKGPVLGLPLVEEKCLAWMECRLLPATSAQQKYDTLFGEVVSAAADARVFVEGR
                     WQFDDDKLNTLHHLGAGTFVTSGKRVTAG"
     gene            complement(11031..11258)
                     /gene="pptA"
                     /locus_tag="RHX79_003602"
     CDS             complement(11031..11258)
                     /gene="pptA"
                     /locus_tag="RHX79_003602"
                     /EC_number="5.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase PptA"
                     /protein_id="HDV2198725.1"
                     /translation="MPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIAL
                     QQIQPESWQAIWDAEIAPQMEALIKKPGYSM"
     gene            complement(11312..11972)
                     /locus_tag="RHX79_003603"
                     /pseudo
     CDS             complement(11312..11972)
                     /locus_tag="RHX79_003603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000420980.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
BASE COUNT         2840 a         3109 c         3104 g         2919 t
ORIGIN      
        1 cgatctgaag ggttgaaaca tgacatacgt tcaaagatta acccccgttt gaaggttagc
       61 ttgttagtta catttagtaa cacatatctg gctacttaat ccccattctg cccccgcggt
      121 tacgctttct tatctattct ttcaatcagc acttcaccca attcatcctt aattctaata
      181 actggctatt gcgccttacc tcctgttttg tcttttttca ttaccaatgt gtgcatgtga
      241 ggaacaatat ggcactgcaa aatgagaaaa atagtcgtta tcttttacgc gactggaaac
      301 cagaaaatcc ggccttctgg gaaaataaag gaaaacatat tgctcgaaga aacctctgga
      361 tatcagtcag ttgtctactt cttgccttct gtgtctggat gctatttagc gcagttaccg
      421 ttaatctcaa taaaatcggt tttaatttta ctaccgatca actcttttta ttaaccgcat
      481 taccctccgt ttctggcgca ttattgcgtg ttccctactc ctttatggtg cctatattcg
      541 gtggacgccg atggacggtt tttagtactg caatcctgat tattccttgc gtctggctcg
      601 gaattgccgt gcaaaatccg aatactcctt ttgggatatt tatcgttatc gctttgctat
      661 gcggttttgc aggtgcaaac tttgcttcga gcatgggcaa tataagtttc ttctttccaa
      721 aagccaaaca agggagcgct cttgggatta atggcggatt aggaaactta ggtgtaagtg
      781 taatgcagct ggttgcaccg ctggtcattt ttgtacctgt atttgccttt ctcggcgtca
      841 atggcgtacc gcaggccgac ggttcggtga tgtcgctggc gaatgccgca tggatttggg
      901 taccgctact ggcgattgcc acgatcgccg cctggtcagg gatgaatgat atcgccagtt
      961 cacgcgcctc aattgccgac cagctccctg tcttacaacg cctgcatctc tggctgctga
     1021 gcctgcttta ccttgccacc ttcggttcgt ttatcggttt ttctgcgggt tttgccatgc
     1081 tggcaaaaac ccagttcccg gatgtgaata ttctgcgcct ggcgttcttt ggcccattta
     1141 tcggtgccat cgcgcggtcg gttggtggtg ctatttccga taagttcggc ggcgtgcggg
     1201 tgacgttgat caactttatt tttatggcga ttttcagtgc cctgctgttc cttaccttac
     1261 cgggcacagg ctccggtaat ttcatcgcct tttacgccgt atttatgggg ctgtttctga
     1321 ctgcgggtct gggaagtggt tctactttcc agatgatcgc cgtcatcttt cgccagataa
     1381 ccatttatcg ggtaaagatg aaaggcggta gtgatgagca agctcagaaa gaagccgtca
     1441 ccgaaacggc ggcggctctg ggctttatct cagccattgg cgcagtgggc ggctttttta
     1501 ttccgcaggc gtttggcatg tcgctcaata tgaccggctc tccggtcggc gcgatgaaag
     1561 tgtttttaat cttctacatc gtttgtgtgc tgctgacctg gctggtttat ggtcggcgga
     1621 agttcagcca aaaataagag atcgatgcct gatgtacaac cgtgtcgcat ccgacaaggc
     1681 atcagatccc aattcattcc tggagcagga gtcatgtcat gagtaaactt ttggatcgct
     1741 ttcgctactt caaacaaaag ggcgaaacct ttgccgatgg tcacggacag gtgatgcata
     1801 gcaaccgcga ctgggaggac agctatcgcc agcgttggca gttcgacaaa atcgtgcgtt
     1861 ccacccacgg tgttaactgt acaggctcct gtagctggaa aatctacgtt aaaaatggtc
     1921 tggtgacctg ggaaatccaa cagaccgact acccgcgcac tcgccctgac ctgcccaatc
     1981 atgaacctcg cggctgcccg cgtggcgcaa gttactcctg gtatctttac agcgctaacc
     2041 gcctgaaata cccgctcatt cgtaaacgac tgattgaact gtggcgcgaa gccctcaaac
     2101 aacacagcga tccggtactg gcgtgggcat cgattatgaa cgatccgcaa aagtgcctga
     2161 gctacaaaca agtgcgtggg cgcggcgggt ttatccgctc caactggcag gaactaaacc
     2221 agctgattgc cgccgctaac gtctggacca tcaaaaccta cggcccggat cgcgttgccg
     2281 gtttctcgcc gatcccggcg atgtcgatgg tttcttacgc cgccggaacg cgttatctgt
     2341 cactgcttgg cggcacctgt ttaagtttct acgactggta ttgcgacctg ccgcccgcct
     2401 cgccgatgac ctggggcgag caaaccgacg taccggaatc tgccgactgg tataactcca
     2461 gctacatcat cgcctggggg tctaacgtac cgcagacacg tacgccggac gcccacttct
     2521 ttaccgaagt acgctacaaa ggcactaaaa ccatcgccat tacccctgac tactctgaag
     2581 tggccaaatt gtgcgaccag tggctggcac cgaaacaagg cactgacagc gccctggcga
     2641 tggcaatggg ccatgtgatt ttaaaagagt ttcatctcga taatcccagc gactacttta
     2701 tcaactactg ccgccgctac agcgacatgc cgatgctggt aatgctggag cctcgcgacg
     2761 atggtagcta cgttcccggg cgcatgatcc gcgcatctga cctggtggat ggactgggcg
     2821 aaagcaacaa tccgcagtgg aaaaccgtag cagttaatac cgcaggtgaa ttggtagtgc
     2881 cgaacggttc gattggtttc cgctggggag aaaaaggcaa atggaatctg gaatccattg
     2941 ccgccggtac ggaaaccgaa ttgtcgttaa ccctgctcgg tcaacatgac gctgttgcag
     3001 gcgtggcctt cccctacttt ggcggcattg aaaatccgca ttttcgcagc gtaaaacaca
     3061 atccggtgct ggtgcgccaa ttgcccgtta aaaacctgac gttagtcgat ggcaacacct
     3121 gtccggtggt cagcgtttat gatttggtac tggcgaatta cggcctcgat cgcgggctgg
     3181 aagatgaaaa cagtgcgaaa gattacgctg aaatcaaacc gtacacccca gcctggggtg
     3241 agcaaattac cggcgtgccg cgccagtata ttgaaaccat cgcccgtgaa tttgccgata
     3301 ccgcccataa aacgcatggg cgctcgatga ttatcctcgg cgcaggtgtt aaccactggt
     3361 atcacatgga catgaactac cgcgggatga tcaatatgct gatcttctgc ggttgtgtcg
     3421 ggcaaagcgg tggcggctgg gcacactatg tcggccagga aaaactgcgc ccacaaaccg
     3481 gctggttgcc actggccttt gcgctcgact ggaaccgacc accgcgccaa atgaacagca
     3541 cctcgttttt ctacaatcat tccagccaat ggcgctatga aaaagtctct gctcaggagt
     3601 tactttcacc gctcgccgat gccagtaagt acagcggtca tctgattgat ttcaacgttc
     3661 gcgccgaacg tatgggctgg ctaccttctg cgccgcagct ggggcgtaac ccgctcggga
     3721 ttaaagctga agccgacaag gccggattat cccccacaga atttaccgcc caggcgctga
     3781 aatcgggcga tttacgtatg gcctgcgaac aaccagatag cggcagcaat catccgcgta
     3841 atttgtttgt ctggcgctct aacctgcttg gctcctccgg caaaggccac gagtatatgc
     3901 agaagtatct gctggggacc gaaagcggga ttcagggcga ggaactcggt gccagcgacg
     3961 ggatcaaacc ggaagaagtc gagtggcaaa ctgcggcgat tgaaggcaag ctcgacctgc
     4021 tggtgacgct cgacttccgc atgtccagta cctgcctgtt ctccgatatc gttctgccca
     4081 ccgccacctg gtacgaaaaa gacgatatga acacctcgga tatgcatccg tttattcatc
     4141 cgctttctgc ggcggtcgat ccggcgtggg aatcacgcag cgactgggaa atctacaaag
     4201 gtatcgccaa agcattttcg caagtgtgcg tgggtcatct tggcaaagaa accgacgtgg
     4261 tattacaacc cctactgcat gactctccgg cagagctctc acagccgtgt gaagtgctcg
     4321 actggcgcaa aggcgaatgc gatctgattc caggcaaaac cgcgccgaat attgtggcgg
     4381 tggagcgcga ctaccctgct acgtatgaac gctttacctc gctcgggcca ttgatggaca
     4441 aacttggcaa tggcggtaaa gggatttcgt ggaatacgca ggatgaaatc gatttcctcg
     4501 gcaaactcaa ttacaccaag cgtgatggcc cggcacaggg gcgtccgctg attgacaccg
     4561 ccattgacgc ttcagaagtg attctggcac tggcaccgga aaccaacggt catgttgcag
     4621 tcaaagcgtg gcaggcgctg ggcgagatca ccgggcgcga acatacccat ctggcgctgc
     4681 acaaagagga cgagaagatt cgctttcgcg atattcaggc gcagccgcgt aaaattatct
     4741 ccagccccac ctggtccggt ctggaaagcg atcacgtatc ctataacgcg ggatacacca
     4801 acgttcatga gttaattccg tggcgcacgc tgtcgggacg ccagcagctc tatcaggatc
     4861 atccgtggat gcgtgctttt ggtgaaagcc tggtggctta tcgcccgcct atcgacaccc
     4921 gtagcgtcag tgagatgcgc cagataccgc caaacggctt cccggaaaaa gcacttaact
     4981 tcctgacgcc gcaccagaaa tggggcattc actcaaccta cagtgaaaac ctgctaatgc
     5041 tgacgctctc tcgcggtgga ccgattgtct ggatcagcga aacagatgcc cgagaactga
     5101 ccattgtcga taacgactgg gtggaagtat tcaacgccaa cggcgcgctg actgcccgcg
     5161 cggtggtcag ccaacgtgta ccgccgggca tgaccatgat gtatcacgcc caggaacgca
     5221 ttatgaatat tcctggttcg gaagtaactg gcatgcgcgg cggcattcat aactcggtca
     5281 cccgcgtttg cccgaaacca acgcatatga ttggcggtta cgcgcagctg gcctggggct
     5341 ttaactacta cggcaccgtc ggatcgaacc gcgatgagtt catcatgatc cgcaagatga
     5401 agaacgttaa ctggctggat gatgaaggtc gcgatcaggt acaggaggcg aaaaaatgaa
     5461 aatccgttca caagtcggca tggtgcttaa cctcgacaaa tgtatcggct gccatacctg
     5521 ttcggtgacc tgtaaaaacg tctggaccgg gcgcgaaggc atggagtacg catggtttaa
     5581 caacgtcgaa accaaaccgg gcattggtta tccgaaaaac tgggaagatc aggaagagtg
     5641 gcaaggcggc tgggtccgcg atgtgaatgg caagatccgt ccgcgtctgg gcagcaagat
     5701 gggcgtaata accaaaatct tcgccaaccc ggtggtgccg cagattgatg attactacga
     5761 acctttcacc ttcgactacg aacatttgca tagcgcaccg gaaggcaaac atatccctac
     5821 tgctcgcccg cgttcactga ttgacggcaa acggatggac aaagtgatct ggggcccaaa
     5881 ctgggaagaa ctgctgggcg gcgagtttga aaaacgtgcc cgcgaccgca acttcgaggc
     5941 catgcaaaag gagatgtacg ggcagtttga aaacaccttc atgatgtacc tgccgcgcct
     6001 gtgcgaacac tgcctcaatc ccagttgcgt ggcgacctgc ccaagcggcg ctatctacaa
     6061 acgcgaagaa gacggcattg tgctgattga tcaggataaa tgccgtggct ggcgtttgtg
     6121 cattagcggt tgtccgtaca aaaaaatcta cttcaactgg aaaagcggca agtcagaaaa
     6181 atgtatcttc tgttatccgc gaattgagtc aggccaaccc accgtgtgct cagaaacctg
     6241 cgtgggtcgc atccggtatc tgggcgtgct gctttacgac gccgaccgca ttgaggaagc
     6301 ggcgagcacc gagcgcgaag ttgacctcta tgaacgtcag tgcgaagtat tcctcgatcc
     6361 acacgatccc tcagtgatcg aggaagccct gaaacaaggt attccacaaa acgtgattga
     6421 agctgcccag cgttcgcctg tctacaaaat ggcgatggac tggaaactgg cgctaccgct
     6481 gcaccctgaa tatcgcaccc tgccaatggt ctggtacgtt cctccgctgt cgccgattca
     6541 gtcctacgca gatgcgggcg gtttgccgaa aagcgaaggc gtgctgcccg ccatcgaaag
     6601 cctgcgtatt ccggtgcaat atctcgccaa tatgttgagt gccggcgata ccggtccggt
     6661 actgcgggcg ctgaaacgga tgatggcgat gcgccactat atgcgttcac aaaccgtgga
     6721 aggcgttact gatactcgtg ccatcgacga agtaggcctg agcgtcgccc aggtcgaaga
     6781 gatgtatcgt tacctcgcca ttgccaacta tgaagatcgt tttgtcatcc cgacgagcca
     6841 tcgggaaatg gcgggcgatg ccttcgcaga acgcaacggc tgcggtttta cctttggcga
     6901 cggttgccac ggttcggaca gtaaattcag cctgttcaac agtagccgta tcgatgccat
     6961 caacatcacc gaagtgcgcg acaaagcgga gggcgaataa tgcagatcct caaagtgatc
     7021 ggcctgttga tggagtatcc ggacgagctg ttgtgggaat gcaaggagga cgcgctggcg
     7081 ttgatccgcc gcgacgcgcc gatgcttacg gatttcaccc acaacctgct taacgcgccg
     7141 ctgctggata aacaggccga atggtgcgaa gtgtttgacc gtggacgtac cacatcgctg
     7201 ctgctgttcg aacatgttca tgccgagtcc cgcgatcgcg gccaggcaat ggtggacctg
     7261 ctggcggagt atgaaaaggt cggcctgcag ctggattgtc gggaactgcc cgattatcta
     7321 ccgctgtatc tggagtattt aagcgtactg cctgacgatc aggcgaaaga aggattgctc
     7381 aatgttgcgc cgatcctcgc cctgcttggc ggtcgcttaa aacaacgcga ggcaccgtgg
     7441 tacgcgttgt ttgatgctct gctgcaactg gcgggaagct ccctttcaag tgacagtgtc
     7501 acaaaacaag taaacagcga agagcgcgat gacacccgcc aggcgcttga tgcagtgtgg
     7561 gaagaggaac aggtgaagtt tattgaagat aacgccacgg cgtgtgacag ctcgccgctt
     7621 aatcaatatc agcgacgctt tagccaggat gtcgcgccgc aatatgtcga catcagtgcg
     7681 ggaggtggga aatgattcag tatctgaacg tcttttttta cgatatctac ccgtacattt
     7741 gtgcgacggt gtttttcctc ggcagctggc tgcgctacga ctacgggcag tacacctggc
     7801 gcgcctcctc aagtcaaatg ctcgataaac gcgggatggt gatatggtcg aatctgttcc
     7861 atatcggcat tttggggatt ttcttcgggc acttgttcgg catgttaacg ccgcactgga
     7921 tgtacgcgtg gtttttgcca gtggcagcga aacaactaat ggcgatggtg ctcggcggta
     7981 tttgcggtgt gttgacattg attggcggcg caggactgct gtggcgcagg ctgacaaatc
     8041 agcgcgtgcg tgcaacttcc actacgccgg atattatcat catgagcatt ttgctgatcc
     8101 agtgtctgct ggggctaagt accataccgt tttcagcaca gtatcctgat ggtagcgaaa
     8161 tgatgaagct ggtgggttgg gcgcaaagca ttgtcacttt ccgtggtgga tcgtcagaaa
     8221 tgcttaacgg cgtagcgttc gttttccgcc tgcatctggt attgggaatg accatcttcc
     8281 tgctcttccc gttcaccaga ttggtgcatg tgtggagcgc gccgtttgag tactttactc
     8341 gtcggtatca gattgtgcgt tcgcggcgat aatttcaccc tggccggata gccctccgct
     8401 ctccggccac ttgcaggcta tgatagttct ccagtcacag gagaacgtta atgaaaccgc
     8461 aggtgtacca cgtcgatgct tttacctctc aaccatttcg cggcaattct gccggtgttg
     8521 ttttccccgc cgataatctt agcgaagcgc aaatgcagct tatcgcccgc gagttaggcc
     8581 attcggaaac tgcttttctg ctgcacagcg acgacagcga tgtgcgcatc cgctacttta
     8641 cgccaacggt tgaagtgccg atttgcggtc acgcgacagt agctgcgcac tatgtacgtg
     8701 cgaaggtgtt aggtttagga aattgcacga tctggcaaac atcgctggca ggaaaacatc
     8761 gcgtgactat cgaaaagcac aacgatgatt atcgtatttc gctggaacaa ggtacgccgg
     8821 gctttgaacc gccgctggag ggtgaaacac gtgaggcgat tatcaacgcg cttcatctca
     8881 ctgaggacga tattctgcca ggcttgccaa ttcaggtggc aacaacagga cactcaaaag
     8941 tgatgatccc gttgaaacca gaagtggata tcgacgccct ttcgcctgat cttgctgcgc
     9001 tgagcgctat cagcaaacag attggctgca atggtttctt cccgttccag atccgcccag
     9061 gcaaaaacga aaccgatggt cgcatgttct cgcctgcgat tggtattgtg gaagatccgg
     9121 tgactggcaa tgccaatggc ccgatgggtg catggttggt acatcacaac gtattgcccc
     9181 acgatggcaa ggtgctgcgt gttaaaggcc atcaggggcg cgcattgggg cgtgacggcg
     9241 tgattgaagt gacggtgaca attcgtgata accaaccgga aaaagtcacc atttcaggca
     9301 cagcggtgat tttgtttcat gccgaatggg taattgaaat ctgaaatcgt tgcctgatgc
     9361 gcttcgcctg tcaggtctac aaccgggcta atgtatgccg gataaggcgt ttacgccgca
     9421 tccggcaacc tgacataaat tattttcccg cctccggatg cgtatcaaac gccgccatca
     9481 ccagcgctaa ctcatccaca gtaaagccat gtttcgcatc atccacgccc agaccaaact
     9541 gttcctgcat cacggcatat aacgacacca catccggtag atttcgctgc tccaccgcgt
     9601 gcccattttc ataatgggta aaatgaaaat tggtcagcgt tagcttgcca ccgtccggca
     9661 aatggcggca catcagcaaa tgatggcgaa aatgcgactg cggccagtgc gccgaccaga
     9721 aattgcccat cacataatcg ctttgttgct gctcgcagag atcaaaacgg tacatcgact
     9781 gccaatgctg atgatgatta aactgcaaca cccaatcatc accctcctgc aacaaccgat
     9841 actctccgtg tggcgtggtc tgcacgagat cggaaactaa acgaatcggc gcggttagcg
     9901 tctgcccacc gaaaccgaca tcagcaatcc atttttcctc ttccagttcc accaacagca
     9961 aacgatgggt gcgcggcggt aatgctggcg gatttgataa cactacgcgc cctaacaagc
    10021 tgcgaacgtt aaaccccagc tcgcgtaaca cccgctcaaa cacgccattc tgctcaaaac
    10081 agtaaccgcc acgacgggct atcaccagtt tctcttccag cgattgatca tcaagctgta
    10141 tttccctcgg cagcaaaacg tcaaggtttt caaacggaat ggtgcaattg tgtttcaggt
    10201 gcaatgcacg aagcgtatca atattgaccg cagcagctcc cgaccagtta atacgggcaa
    10261 aatagtgatt cagaatgggc gtcatcaggc gtttccctta gtggttttct caacttataa
    10321 cctggaatag acgccgcacc ggctattttg tgcgatcgcg gacatgcatc acgtttgcaa
    10381 atcgccaatc ccgttaattt cgttacttat tgcgttacgg actacgctta aaaaaacctt
    10441 cttcgcgagg cgataccatg agccgattca tccccataga attacaccat gccagccgtc
    10501 tattaaatca tggcccaact gtcatgatca ccagtttcga tgagcaatcc cagcggcgta
    10561 acattatggc tgcagcctgg tcaatgccgg tggagtttga accgccacgc gtggcgattg
    10621 tggtagataa atcgacatgg accagggagt tgattgaacg taacggtaag tttggcatcg
    10681 ttatcccggg cgttgcagca actaactgga cgtgggcagt gggaagcgtg tcgggtcgtg
    10741 aagaagataa atttaattgc tatggcattc cggtggtgaa aggtccggtg cttggtttgc
    10801 cacttgttga agagaaatgc ctggcgtgga tggagtgccg cctgctacct gcgacttctg
    10861 cgcaacaaaa atacgacacg ctgtttggcg aggtggtatc agcagcggca gacgcacggg
    10921 tatttgtcga aggccgctgg cagtttgatg atgataagct caatacgttg catcatttag
    10981 gtgctggcac gtttgttact agcggcaagc gtgttacggc aggttaagca ttacatgctg
    11041 taaccgggtt tctttatcaa agcctccatt tggggcgcga tttcggcatc ccagatagct
    11101 tgccaagatt ctggttgaat ctgctgtaga gcaatgctta tcgaactgtc tttactgttc
    11161 agatggcgaa taataacgtc ggtaatatct gcagcaagtg ctgctttttg ttgttcgtcc
    11221 agttcacgcg gaaagcattt aatgtcgatg tgcggcatga ttgtgctcct tttgaaagat
    11281 gtcagtaaaa ttaacacaca ttgtgaattt tcagtccttt ccattcaaac gtgaaatcaa
    11341 taagttcatc agggacatcg caaacaatat gaatacggat ttcttctctg ccgtgactct
    11401 tttcacaaat tgcgtaactg tcatgctctg gattatttaa ttctttcagc ggaaattttt
    11461 cctcaaaggc tttatttagc cacccctggt ttcctttcac cgcgaataaa taatcacctc
    11521 cctgtttttg tatcttctct gctatatctt tctggcaacc catcgcatca gttgtgatga
    11581 tttttccttt aatatccagc atgttaagaa gttctgggat agctgtaatc tcattagatt
    11641 tatcatccgt cttgatctgt ccgatgacca gactgtgcat tgttgagaac gcactaatga
    11701 catgaatcgc tcccctgcgg cgactcttat cataagaatg ccggagcgtt tttccatcaa
    11761 ttgcaatgac gtctttatca tctgaagaat gacaatcacg catccagtta ataaagcact
    11821 catgaaattt tgtagggctg atacaggata caactctggc aatggtatcg tgaacaggaa
    11881 taccattttc aaaatcacca tattgcttca aaaaatcgag atgtgtttcc ccaaaatcct
    11941 ctatatcttc ccaaccttct gtacccgaaa ta
//
LOCUS       DAPGWB010000137        11930 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.139, whole genome shotgun sequence.
ACCESSION   DAPGWB010000137 DAPGWB010000000
VERSION     DAPGWB010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11930
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.139"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            62..177
                     /gene="rrf"
                     /locus_tag="RHX79_003604"
     rRNA            62..177
                     /gene="rrf"
                     /locus_tag="RHX79_003604"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            500..1798
                     /gene="kgtP"
                     /locus_tag="RHX79_003605"
     CDS             500..1798
                     /gene="kgtP"
                     /locus_tag="RHX79_003605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate permease"
                     /protein_id="HDV2198726.1"
                     /translation="MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFC
                     SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCM
                     MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF
                     YASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQL
                     DETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM
                     HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVS
                     SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYV
                     ALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKGMRL"
     gene            complement(1795..2118)
                     /locus_tag="RHX79_003606"
     CDS             complement(1795..2118)
                     /locus_tag="RHX79_003606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417081.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiM family lipoprotein"
                     /protein_id="HDV2198727.1"
                     /translation="MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNE
                     YSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVW
                     QLTRH"
     gene            complement(2164..3519)
                     /gene="pssA"
                     /locus_tag="RHX79_003607"
     CDS             complement(2164..3519)
                     /gene="pssA"
                     /locus_tag="RHX79_003607"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDV2198728.1"
                     /translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKI
                     ASAKQRICIVALYLEQDDGGKGILNALYEAKRQRPELDVRVLVDWHRAQRGRIGAAAS
                     NTNADWYCRMAQENPGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL
                     HQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLF
                     RQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNL
                     PAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSR
                     LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHD
                     PQLELAPQREKELELIREHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI
                     L"
     gene            complement(3633..6293)
                     /gene="pat"
                     /locus_tag="RHX79_003608"
     CDS             complement(3633..6293)
                     /gene="pat"
                     /locus_tag="RHX79_003608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein lysine acetyltransferase"
                     /protein_id="HDV2198729.1"
                     /translation="MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPV
                     LPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSA
                     PASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS
                     NTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
                     SAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSA
                     VETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSEETCQKLRDALPEHV
                     AVSNPLDLRDDASSEHYVKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKH
                     HPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
                     ETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTE
                     AVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA
                     RVHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMN
                     LARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASG
                     SEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQ
                     QFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTR
                     AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVA
                     LARKLGFNVDIQLEEGIVGLTLNLAQREES"
     gene            complement(6325..7023)
                     /gene="tapT"
                     /locus_tag="RHX79_003609"
                     /gene_synonym="tuaA"
                     /gene_synonym="yfiP"
     CDS             complement(6325..7023)
                     /gene="tapT"
                     /locus_tag="RHX79_003609"
                     /gene_synonym="tuaA"
                     /gene_synonym="yfiP"
                     /EC_number="2.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311476.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-uridine aminocarboxypropyltransferase"
                     /protein_id="HDV2198730.1"
                     /translation="MTENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCS
                     TITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLDLVQNP
                     DYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVIS
                     VDLSRLSAYRLREAQAAGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKT
                     QHLGSITAEQLESV"
     gene            complement(7092..7511)
                     /gene="trxC"
                     /locus_tag="RHX79_003610"
     CDS             complement(7092..7511)
                     /gene="trxC"
                     /locus_tag="RHX79_003610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxC"
                     /protein_id="HDV2198731.1"
                     /translation="MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGET
                     LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRF
                     GIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL"
     gene            7718..8755
                     /locus_tag="RHX79_003611"
     CDS             7718..8755
                     /locus_tag="RHX79_003611"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HDV2198732.1"
                     /translation="MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRA
                     DGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR
                     QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
                     ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC
                     AHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS
                     SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV
                     LLGEWWRQNKA"
     gene            complement(8803..9492)
                     /gene="ung"
                     /locus_tag="RHX79_003612"
     CDS             complement(8803..9492)
                     /gene="ung"
                     /locus_tag="RHX79_003612"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDV2198733.1"
                     /translation="MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDV
                     FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPG
                     FTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV
                     FLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPI
                     DWMPVLPAESE"
     gene            9797..10180
                     /gene="grcA"
                     /locus_tag="RHX79_003613"
     CDS             9797..10180
                     /gene="grcA"
                     /locus_tag="RHX79_003613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007728348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HDV2198734.1"
                     /translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVV
                     AVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVIARTFTESL"
     gene            complement(10236..10823)
                     /gene="eamB"
                     /locus_tag="RHX79_003614"
     CDS             complement(10236..10823)
                     /gene="eamB"
                     /locus_tag="RHX79_003614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/O-acetylserine transporter"
                     /protein_id="HDV2198735.1"
                     /translation="MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLA
                     GMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQA
                     KPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW
                     ALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY"
     gene            10926..11807
                     /locus_tag="RHX79_003615"
     CDS             10926..11807
                     /locus_tag="RHX79_003615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2198736.1"
                     /translation="MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFS
                     VQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKESDPDGELRVVSGETLLS
                     YRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRRELG
                     EQSLVLVASPQIADVDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIEL
                     LSIESIKRCVAANIGVSYLPRFAVEKELESGELIELPFGEQSQTITAMCAHHAGKAVS
                     PAMHTFIQCVEESFVAG"
BASE COUNT         2969 a         2984 c         3096 g         2881 t
ORIGIN      
        1 gattttcagc ctgatacaga ttaaatcaga acgcagaagc ggtctgataa aacagaattt
       61 gcctggcggc cgtagcgcgg tggtcccacc tgaccccatg ccgaactcag aagtgaaacg
      121 ccgtagcgcc gatggtagtg tggggtctcc ccatgcgaga gtagggaact gccaggcatc
      181 aaattaagcg aaaggccatc cgtcaggatg gcctttttgc gttggtgaaa aaaatgcctg
      241 atgcgacgct gcgcgtctta tactcccaca tatgccagat tcagcagcga atacggcttc
      301 cccaacttgc ccacctccat acgtgttctc ctcaccagaa atttatcctt aagctcctca
      361 ataaccattt tcctgctaac taaattcatg gttaaggttg cataatgata cgcaacaaat
      421 gtataacatt ttctttacca aaagaaataa acaaaagcga ccgacaaaag catcggatta
      481 cggcaggaga cataatggca tggctgaaag tactgtaacg gcagacagca aactgacaag
      541 tagtgataca cgtcgccgca tttgggcgat tgtgggggcc tcttcaggta atctggtcga
      601 gtggttcgat ttctatgtct actcgttctg ttcactctac tttgcccaca tcttcttccc
      661 ttccgggaac acgacgactc aactactaca aacagcaggt gtttttgctg cgggattcct
      721 gatgcgccca ataggcggtt ggctatttgg ccgcatagcc gataaacatg gtcgcaaaaa
      781 atcgatgctg ctatcggtgt gtatgatgtg tttcggctca ctggtaatcg cctgtttgcc
      841 tggttatgaa acaatcggta cgtgggctcc ggcattattg cttctcgcgc gtttatttca
      901 gggattatcc gttggcggag aatatggcac cagcgccacc tatatgagtg aagttgccgt
      961 tgaagggcgc aaaggttttt acgcatcatt tcagtatgtg acgttgatcg gcggacaact
     1021 gctagcccta ctggttgtcg tggttttaca acacaccatg gaagacgctg cactcagaga
     1081 gtggggatgg cgtattcctt tcgcgttagg agctgtgtta gctgttgtgg cgttgtggtt
     1141 acgtcgtcag ttagatgaaa cttcgcaaca agaaacgcgc gctttaaaag aagctggatc
     1201 tctgaaagga ttatggcgca atcgccgtgc attcatcatg gttctcggtt ttaccgctgc
     1261 gggctccctt tgtttctata ccttcaccac ttatatgcag aagtatctgg taaatactgc
     1321 gggaatgcat gccaacgtgg cgagtggcat tatgactgcc gcattgtttg tattcatgct
     1381 tattcaacca ctcattggcg cgctgtcgga taagattggt cgccgtacct caatgttatg
     1441 tttcggttcg ctggcagcca tttttaccgt tcctattctc tcagcattgc aaaacgtttc
     1501 ctcgccttat gccgcttttg gtctggtgat gtgtgccctg ctgatagtga gtttttatac
     1561 atcaatcagt ggaatactga aggctgagat gttcccggca caggttcgcg cattaggcgt
     1621 tggcctgtca tatgcggtcg ctaatgctat atttggtggt tcggcggagt acgtagcgtt
     1681 gtcgctgaaa tcaataggaa tggaaacagc cttcttctgg tatgtgacct tgatggccgt
     1741 ggtggcgttt ctggtttctt tgatgctaca tcgcaaaggg aaggggatgc gtctttagtg
     1801 acgggtcagt tgccagacgg tatagccggt gcttgcaccg gcgacatccc aggccaaatc
     1861 cttccagctc cagccgctcc cttcggggcg gctatcccaa agctcttttg acgcccccaa
     1921 actgacagag aacatcaatc caaacatggc actgcgatcc cggctcatcc cctgatgctg
     1981 tgaatattca tttccggcgg cggaaagcat cgccgaggca ataaagtgtt gagctttatc
     2041 ctgcccgctc cagctatcgt tagccatatg gctgcatcca gaaagtaaca atagcgaaca
     2101 gacaaaaaga atacgcaaaa cgtggcctcc aaaaaacaaa ccccgtacag gacggggttg
     2161 tgattacagg atgcggctaa ttaatcggtc gatgcggata cggcgcaaac ggcggatgag
     2221 tttacgaacc ttcaccggat aatcggcaat actttgcaga tcgcgatagt gcttaacgat
     2281 ggtggtatgc tcgcggatca gctccagttc tttctctcgc tgcggcgcaa gctccagttg
     2341 tggatcgtgg atcaaaatgg cgttttccag atccagacgc caggcgcgcg ggttcaggtt
     2401 attaccggtg atcaacatcc acttatcatc aacccacatc ccttttaggt gataggtgtt
     2461 gtcgtcatct ttccataacc gaaccactag ctggtcagta ttgacgtaat actgcaaacg
     2521 gctcaggaaa cgacgcagat tgatctcata gagataaggc aatgcgccaa ttatcttgaa
     2581 aggttcatct tccggaatgt agaagtcgtt cgcggtttta tcaccaacaa taatttcgac
     2641 ctttttccct tcgcgcagca actggataat attgcgcaca aggattgctg gcaggttgaa
     2701 gtatggcgta cagatggtta gtttctgctc ggcacaaggc ataagatgga aaatggtctt
     2761 gttcaacaga ctcgatttcc ccagccccac tagcggcgtt acggaaagct gatcgttgtc
     2821 ggcatcgccc tggaaatgat aagcggcatc acgcagctcc tggcggaaca gacgaatatc
     2881 gttcttgatt tccgggcttt ttggccgatt aacatcatcc agacgattaa cgccgcggcc
     2941 attcataata ttctgtgtaa cccattcaaa cataatgtct gacatcttac ggttacggat
     3001 cagatgataa cggtcgtagc gatatttatc gtgctgatgc aggtaaacat cgttcaggct
     3061 ggcaccgcta taaagtacgc tatcgtcgat gataaagcct ttaaagtgca gaacaccaag
     3121 ggcttcacgg gtattgattg gaacgccata aaccggaaca tctacgcccg gattttcctg
     3181 cgccatgcgg cagtaccagt cagcgttagt gttagatgcc gcagcgccaa tgcgtccacg
     3241 ttgtgcacga tgccagtcga ccagcacccg cacatccagt tccggacgct gccttttagc
     3301 ttcatacaac gcgttcagaa tgcctttgcc accgtcatcc tgttcgagat acagggcgac
     3361 aatgcaaatg cgctgcttcg cgctggctat tttttccagc agcgtctccc ggaagtcggc
     3421 gggagcgtaa aagaaatcga catcatcaac tgattgagaa atcttgggta gttgggcaag
     3481 gtgttgttga tgtttattac gcttaaattt tgacaacatc acagtgcatt tcttctctgt
     3541 tcattgaagg gtcctctgtg caatgcagac gacataagcg ggcaataata acaccagtcc
     3601 cgattaagtg gtcaacattt ccagtacctt actcatgatt cctcgcgttg ggcaagattt
     3661 agcgtaagcc caacgatccc ctcttcgagc tggatatcaa cgttaaaccc gagcttgcgg
     3721 gctagcgcca ccatgccacg attgtttggc atcgtaatac cattcagacg ttgtagtccg
     3781 tgatctcgcg tataggtaat caacttttcc attaagcgtc gacctaagcc taaccctttg
     3841 agatccgagc gaaccagcac agcaaattcg gcatcgatgt tatcaggatc ggaaatcgca
     3901 cgcgtgacgc cgaggatctc ttccgtttga tcaatacgtc gtaccgctac aaacgccatt
     3961 tcccgatcgt agtcgatctg tgtcatgttg gctaaatctt catgggtaaa ttcgttgatc
     4021 tcgctaaagt agcggtaata aagatcttct ttggtgactc gcgaaatgaa ttgctgaagt
     4081 tgtggctcat cttctggcaa aatcgggcgg aacaagcagc gttcaccgtt tttcaattct
     4141 acccattctt ccagctgatg cggataaggg cgcactgcca gccgactctc gttatcgcct
     4201 tcaaacggcg agatatccag cgtgacatcc agcgcggtaa attcactgcc agaagccagc
     4261 aaaggatgaa tatccagacg ctgaatttcc gggcaatcga caatcaagtt ggaaacctgc
     4321 accagaagct ggctcaagcc tgcaacatcc aatgggcgta gcgcactgcg cgcacgaatc
     4381 tttttacttt tgatcccctg aataaccaga tagcgggcca ggttcatgtt cagcggcggc
     4441 agtgcgacga cggcttgatc ttcaggacgc cactccacac cgccttcacc cagcatgatc
     4501 aacggcccga aaaccggatc gtgctcaacc acaacccgca actcctgagc gccagcacgg
     4561 ttagccatac tttgcaccaa caggccgtgg acccgcgcct gtggccaggc catttttacg
     4621 cgatcgaaaa tagcgttcgc cgcttgctgg acttcattgg ctgtacgcag gtaaagcatg
     4681 acgccctgaa cttccgattt atgtggaata tccggcgaac gcaatttcag cgccaccgga
     4741 taaccaatct gttcggcaat atgcaccgct tcggtgctat cgctggcaat ccaggtaggg
     4801 agcgtgttca tgccatacgc ttgcaggatg ggctgaactt catgggtatc gagcgacgta
     4861 gccccttcgg caatcgcctg ttgcaacaga agatgcgctt ctgcggtatt ggaagtcaga
     4921 ttgctgggca acgccggcgt ttcgcgtagt tgcttctgat tacgccggta ctccaccata
     4981 tgcataaaag cagtgatggt tccttccggg gtacggtagg tcggcagccc ggcttcgctg
     5041 aataaacgtc gtgcctcttg cgaggagtgc tcgccgcacc agttcgtcag caaagagaca
     5101 tatttgctgc ggggatgatg ctttaccgct tcaattaata cttgcgcgct ttctgttgcg
     5161 ggagcagcgg cgctgggcga atgaataacc atcagcgcat caaaatcctg gctgtggagc
     5221 agaatgtcca gcgttttgac ataatgctcg ctgctggcgt catcgcgcag atcgagaggg
     5281 ttagagactg ccacatgttc tggcaatgca tcgcgcaatt tctggcaggt ttcttcgctt
     5341 agcgttgcca gcttgccatt gcgtgaccat aaggcatcca gcgccagcgc ggcaggcgca
     5401 gcaccgttgc tgataatcat caaccggtcg ccacgcagcg ggcgcatatg gctaagggtt
     5461 tccaccgccg aaaacagttc gtgggtatcc tgtacccgca acaaaccggc acgctgaata
     5521 gccgcatccc atgccgggtc cattcctgcc gtcgtgttga gcagtcgctg tgccgccggg
     5581 ctacgtccgc ttttaatcac cagaatcggt ttattacgcg aggcactacg ggctgccgaa
     5641 acaaagcgtc gcgcgtcgct taactgttcg agatagagca ggatggcgct ggttttactg
     5701 tcgcgcgcca gatagtcgag caattcatca acgtcgatat ccaggctgtc gccgagcgca
     5761 ataaagtagg aaaagcccat ctcacgctgt tgcgcccagt cgaggatggt gttggagacg
     5821 gctgccgatt gtgaaataaa cgccagcttg ccgcgtttaa tcggcacagg cgaaaagctg
     5881 gcattcagac cttgccaggg agccagtaaa cccagactgt ttggtccaag caggcgcatg
     5941 ttatggcgca gggcgcaggc gcggagatct tcgtgttgcg atgccggggc ggaaagaata
     6001 atgcaggttt tacagccttt ctcgccgagc tcttccagaa gagcaagatt acggctggca
     6061 ttggtacata aaaccgcaag gtcgggtgta aagggcaagc tggcaatatc cggccaggcc
     6121 aacacaccca acaccgcttt ccaggctggc gtcaccggga gtaccggtcc gttaaagcct
     6181 cccgccagca ggttacgcat catcaggtaa cctgcgcgat tgggtttcat cgacgcgcca
     6241 attaccgcta tcgattttgg tcgcagtagt gcttccagtc ctcgctgact cataccggtc
     6301 tcccgcagaa gtgaccgaat gattttaaac gctttctaac tgttctgctg tgatgctacc
     6361 cagatgttgc gtttttcctg ccagatagcg tgttttaaag cgggtaaaat gctcgcctaa
     6421 ccctgctgcc gccccggtat cgccggccat atctaacagt gcgatggcta cctcggcagt
     6481 acaatattgg cctgcagcct gggcttcacg caggcgatag gcagaaagcc gggaaagatc
     6541 gacggaaatg acgggaagat tatccagata cggactttta cgaaacatct tgcgagcttc
     6601 cggccaggta ccatcgagca tgataaacag cggtggctta ccggcaggtg gtgtgaagat
     6661 cacttcccgt tgctcatcag catacgaggc gggaaagacc accattggct gataatccgg
     6721 gttttgtacc agatccagca aatcctgcga gggttcggta cgcgaccatt gaaacgcaac
     6781 ggtatcaggc aaaatatcag caatcagacg cccggtatta ctgggcttca ttggctcggt
     6841 gtcgaacatc agcaaacaga agcgactttt tgcttgtgct ggggtaattg tcgaacagag
     6901 acataatttc tctggcaaaa gacagcgttg gcagcgacga acgcgattac cgcgggcaag
     6961 aaaaggacgt gttgcgcgcg caatacgctc ggcgcgtaac tggagaacag cgttttcggt
     7021 cataagagag cgtcgaaaaa acgccattgt cgcagaggag aaaacggggc acaagatgcg
     7081 ccccggtaag attaaagaga ttcgttcagc cagctatcga acggcgcttt cggtactgcg
     7141 ccattaagca tgtcgacaac ctgaccgttt ttgaaaatca tgatcgtcgg tatactacga
     7201 attccaaagc gactgctcaa ttcacgttca gcttcggtat tcactttcac aaagcgcact
     7261 ttaccgctac gctcttgcgc gacatcttca aaaattggtg cgaaattacg gcaggggccg
     7321 caccacggtg cccagaagtc gatcaccaca ggtagatcat ccttcagcaa tttgtcgagt
     7381 gtttcaccgg tcgcattaat cacctctccg tcaaacaagt cgtgaccgca gcgtccgcat
     7441 tttgccgcat cttcgatccg atcgtcggga atgcgattga tggcctgaca atgggtgcaa
     7501 acggtattca taactaacct cgggatgagt aaggagactt atcggcaacg acgccggtat
     7561 gtttctaata tgttacatat tatcggggac attgttccag acaacaatct gttttattca
     7621 ataggtatga tagtcgcagg ctttggtacg aaatcatggc gaaccgcgcg gacttcgggt
     7681 aatctgcgcg cttcgcgcag cgctggtgga gaaaagcatg aacgatgaaa tgaaaggtaa
     7741 aagcggcaag gtcaaagtga tgtatgtccg cagtgatgat gattctgata aacgtaccca
     7801 caacccgcgt accgggaaag ggggcgggcg tccaggaaaa tctcgtgctg acggtggccg
     7861 tcgccccgcc cgcgatgaca aacagagtca gccccgtgac cgcaagtggg aagattcgcc
     7921 gtggcgcacg gtttcccgcg cgccgggtga tgagacgccg gaaaaggccg atcacggtgg
     7981 catcagtggt aaaagtttta ttgatccgga agtgttgcgt cgtcagcgtg cggaagaaac
     8041 ccgcgtctac ggcgaaaatg catgtcaggc acttttccag agccgtccgg aagcgattgt
     8101 tcgcgcctgg tttatccaga gtgtaacgcc gcgttttaaa gaagccttgc gctggatggc
     8161 agcaaaccgc aaagcgtacc atgtggtgga tgaagcggaa ttgacaaaag cgtcaggcac
     8221 ggaacatcac ggcggcgttt gcttcctgat caaaaagcgt aatggcacaa ccgtgcagca
     8281 gtgggtaagc caggcaggcg cgcaggattg tgtactggcg ctggaaaacg aatctaaccc
     8341 gcataacctg ggtggcatga tgcgcagctg cgcgcacttc ggcgtgaaag gcgttgtggt
     8401 gcaggatgcg gcactgctgg agtcgggggc ggctatccgt accgcagaag gcggcgcaga
     8461 gcacgttcag ccgattactg gcgacaacat tgttaacgtg ttggatgatt tccgtcaggc
     8521 aggttacacc gtagtgacca cttccagcga gcaggggaaa ccgctgttca aaaccagtct
     8581 gccagcgaaa atggtactgg tgctgggtca ggaatatgaa gggttaccgg atgccgcacg
     8641 cgatccgaac gatctgcgcg tgaagattga cggtacgggc aacgttgccg ggctgaatat
     8701 ctctgttgca accggcgttt tgcttggtga atggtggcgt cagaataaag cctgataaat
     8761 cagccgggtg gcaactctgc catccggcat tttaccgcaa atttactcac tctctgccgg
     8821 taatactggc atccagtcaa tcggcgtctc gccacgttgt tccagccact gatttgccag
     8881 cacaaaatgg ttgcagccaa agaatccacg atgcgccgaa agcggcgacg gatgcggtgc
     8941 tttcagtaca tgatggcgtt gcttatctat aatcgcccct ttcttttgcg catgtgatcc
     9001 ccacaacaaa aacaccacgc cttcgcggtg ctggttaatc aggctgatga ctttatcagt
     9061 aaacgtctcc caaccgaggc tggcgtggga atgcgcctga cctgcgcgaa ccgtcaacac
     9121 agtattgagc agcagaacgc cctgacgcgc ccagctttcg agatagccat gattagggcg
     9181 ggtgaagccc ggaatagtat tttccagctc tttatacata ttcaataatg acggaggaat
     9241 ggcaatgccg ggacgaacgg aaaatgccag accatgcgcc tgtcccggtc cgtgataagg
     9301 atcctggccg agaatcacca ctttaacgtc acccaactcg gtaaagcgga acgcgttaaa
     9361 gacatctttt tgtggtggat agatagtgac gccggactgc cgctcgctgg cgacggtctg
     9421 aagggtatta agaaaataag gttgttgctt ctcttcagcc agcacgtcat gccaggttaa
     9481 ttcgttagcc atctcgctct cctgcgaatc ttcaatccgc ctagcttaac tgcttctttc
     9541 tacagaacaa aatcatgctc attttttaga cttaaacgag tgcaaaaaaa tgtaaattgg
     9601 taaaatttca cacccgcata agttgatgta aaacaataaa atccatttac gaccacaatc
     9661 gatgtgtggt ttttattgat ttaaatcaaa gaatcaaggg tggttgagga gtatatatac
     9721 actcaagcaa caatggtttt accaattggc cgcgacaggc tgaacaaatc aaataatttt
     9781 gccggggagg catcacatga ttacaggtat ccagattact aaagccgcta acgacgatct
     9841 gctgaactct ttctggctgc tggacagcga aaaaggcgaa gcacgttgca tcgttgcaaa
     9901 agcaggttat gcagaagatg aagtggttgc agtaagcaaa ctgggtgaca ttgaataccg
     9961 tgaagttcca gtagaagtga aaccagaagt tcgcgttgaa ggtggtcaac acctgaacgt
    10021 taacgttctg cgtcgtgaaa ctctggaaga tgcagttaag catccggaaa aatatccgca
    10081 gctgaccatc cgtgtatccg gttatgcagt tcgctttaac tctctgactc cggaacagca
    10141 gcgcgacgtt atcgctcgta cctttactga aagcctgtaa ggcttaagta gcaagttact
    10201 aagcggaaga gggcgacctc ttccgctttt tttcgttaat agaaaatgcg taccgcgcaa
    10261 tagaccagca acagggcaag cacgatattt aactggcgac catactggcg aaacaatcgc
    10321 tgaaacagat gccccgccag cgcccagcac acattgccaa acgtcccaat catcgccagc
    10381 aaaacgctga cgccaactac ccagcttagc gcctgtgttt gcggcagaac aaacgtcgac
    10441 agtgccgtaa caccgtacaa aatgattttg acgttcacaa actgcaaagc aaagctggcc
    10501 caaaagctga ttggttttgc ctgaagtccg tcttcctttg ttgggctggt ggcgattttc
    10561 cacgccagcc agacaatata tgccgccccc gcccaactca aaaggtgtac cgctgccggg
    10621 tcaatcactg ccagtgaaaa tgaaatgccc gcacacagta acatcacaat caaaaatccc
    10681 agactcatcc ctgccagcac gcgggtactt tgacgaaatc catgcgacgt agcagagcta
    10741 agggcgagaa tattgttcgg tcctggcgtc atagcggtaa tcagggtgta agtccaaaaa
    10801 gcacttaaaa gggtcggtgt cacttgttat ctcctctgtt ttggtagaca gtacccgaca
    10861 cggaacattt aaaaaaatga atgtttttat attctagatt cgatattttc gataggtttg
    10921 gggttatgga tctgcgccgt tttattacgc ttaaaaccgt ggtggaagag ggttcctttt
    10981 tgcgagcttc gcaaaaattg tgctgtacac aatcgacggt gacttttcat attcagcagc
    11041 ttgagcagga gttttcagtc cagttatttg agaaaattgg ccgacggatg tgccttaccc
    11101 gcgaaggaaa aaagttgctg ccgcacattt atgaacttac ccgagtgatg gatacgcttc
    11161 gtgaggctgc caaaaaggag tcagatccgg acggggaact acgcgttgtt tcgggcgaaa
    11221 cgttgctctc ttaccgaatg ccgcaggtgt tgcagcgttt tcggcaacgc gcaccaaaag
    11281 tgcgtttatc gttgcagtcg ctgaactgtt acgtgatccg tgatgcgcta ctgaatgatg
    11341 aggccgatgt cggcgtcttt tatcgcgtag ggaatgatga tgccctgaac cgacgagagt
    11401 tgggtgaaca atcgctggtg ctggtggctt caccgcaaat tgcagatgtc gattttactg
    11461 agccgggaag acataacgcc tgtagcttta ttatcaacga accgcaatgt gtcttccggc
    11521 agatatttga gagcacgctg cgtcagcggc ggatcacggt ggaaaacacc attgagctgt
    11581 taagcattga aagtatcaaa cgttgtgtcg cggcgaatat cggtgtcagt tacttgcccc
    11641 gctttgcggt ggaaaaagag cttgagagcg gagaattaat tgaattgcct tttggcgaac
    11701 agtcgcagac cattacggcc atgtgcgcac accatgctgg aaaagcggtt agcccggcga
    11761 tgcacacttt tattcagtgt gttgaagaga gttttgtggc tggataaaaa taatgtcggg
    11821 attaaacccg gcatttaact tgtcgacaaa gtgcgcttta ttcatgccgg atgcggcgtg
    11881 aacgccttat ccggcctaca agatcgtgca aattcaatat attgcatgag
//
LOCUS       DAPGWB010000138        11919 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.140, whole genome shotgun sequence.
ACCESSION   DAPGWB010000138 DAPGWB010000000
VERSION     DAPGWB010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11919
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.140"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            85..519
                     /gene="slyA"
                     /locus_tag="RHX79_003616"
     CDS             85..519
                     /gene="slyA"
                     /locus_tag="RHX79_003616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416159.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SlyA"
                     /protein_id="HDV2198737.1"
                     /translation="MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLP
                     PDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISE
                     MEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG"
     gene            complement(566..1033)
                     /gene="slyB"
                     /locus_tag="RHX79_003617"
     CDS             complement(566..1033)
                     /gene="slyB"
                     /locus_tag="RHX79_003617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein SlyB"
                     /protein_id="HDV2198738.1"
                     /translation="MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGT
                     IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGV
                     QSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR"
     gene            1307..2416
                     /gene="anmK"
                     /locus_tag="RHX79_003618"
     CDS             1307..2416
                     /gene="anmK"
                     /locus_tag="RHX79_003618"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HDV2198739.1"
                     /translation="MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSL
                     KQAVLDICQGQQLTLSQFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVW
                     HEPTGVAPHTLQIGDNNQIVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHST
                     ERRMVLNIGGIANLSLLIPGQPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGK
                     VILPLLQNMLSDPYFSQPAPKSTGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAV
                     TISEQVLLSGGCERLMVCGGGSRNPLLMARLAALLPGTEVITTDAVGISGDDMEALAF
                     AWLAWRTLAGLPGNLPSVTGASQETVLGAIFPANP"
     gene            2514..2843
                     /gene="mliC"
                     /locus_tag="RHX79_003619"
     CDS             2514..2843
                     /gene="mliC"
                     /locus_tag="RHX79_003619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lysozyme inhibitor"
                     /protein_id="HDV2198740.1"
                     /translation="MSMKKLLLICLPVLLTGCSAFNQLVEHMQTATLEYQCDEKPLTV
                     KLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNC
                     QLQNPQR"
     gene            2902..3558
                     /gene="pdxH"
                     /locus_tag="RHX79_003620"
     CDS             2902..3558
                     /gene="pdxH"
                     /locus_tag="RHX79_003620"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HDV2198741.1"
                     /translation="MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACE
                     AKLADPTAMVVATVDEHAQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLL
                     FPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKF
                     LELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
                     "
     gene            3687..4961
                     /gene="tyrS"
                     /locus_tag="RHX79_003621"
     CDS             3687..4961
                     /gene="tyrS"
                     /locus_tag="RHX79_003621"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDV2198742.1"
                     /translation="MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTA
                     DSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVD
                     KIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQR
                     LNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQN
                     QVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT
                     FMSIEEINTLEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSA
                     LSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQS
                     DPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK"
     gene            5020..5883
                     /gene="pdxY"
                     /locus_tag="RHX79_003622"
     CDS             5020..5883
                     /gene="pdxY"
                     /locus_tag="RHX79_003622"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase"
                     /protein_id="HDV2198743.1"
                     /translation="MMKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNH
                     TQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKA
                     ANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNN
                     VEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQ
                     PVGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIA
                     KPEHYFSATKL"
     gene            complement(5927..6532)
                     /gene="gstA"
                     /locus_tag="RHX79_003623"
     CDS             complement(5927..6532)
                     /gene="gstA"
                     /locus_tag="RHX79_003623"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HDV2198744.1"
                     /translation="MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYF
                     VVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIA
                     TELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNEALKDEHWICGQRFTIADAYLFT
                     VLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAEGLK"
     gene            complement(6638..8140)
                     /gene="dtpA"
                     /locus_tag="RHX79_003624"
     CDS             complement(6638..8140)
                     /gene="dtpA"
                     /locus_tag="RHX79_003624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpA"
                     /protein_id="HDV2198745.1"
                     /translation="MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM
                     AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY
                     ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVN
                     IGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINY
                     RNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMI
                     VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSP
                     ILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQ
                     SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDP
                     LMSLEVYGRVFLQIGVATAIIAVLMLLTAPKLHRMTQDDAADKAAKAAVA"
     gene            complement(8751..9386)
                     /gene="nth"
                     /locus_tag="RHX79_003625"
     CDS             complement(8751..9386)
                     /gene="nth"
                     /locus_tag="RHX79_003625"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDV2198746.1"
                     /translation="MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATD
                     VSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG
                     EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE
                     EKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI"
     gene            complement(9386..10081)
                     /gene="rsxE"
                     /locus_tag="RHX79_003626"
     CDS             complement(9386..10081)
                     /gene="rsxE"
                     /locus_tag="RHX79_003626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxE"
                     /protein_id="HDV2198747.1"
                     /translation="MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA
                     TTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI
                     PLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDG
                     ADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRTEAA
                     AERALPNGETGNV"
     gene            complement(10085..10705)
                     /gene="rsxG"
                     /locus_tag="RHX79_003627"
     CDS             complement(10085..10705)
                     /gene="rsxG"
                     /locus_tag="RHX79_003627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HDV2198748.1"
                     /translation="MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKA
                     LFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSG
                     AIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAV
                     KKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE"
     gene            complement(10709..11767)
                     /gene="rsxD"
                     /locus_tag="RHX79_003628"
     CDS             complement(10709..11767)
                     /gene="rsxD"
                     /locus_tag="RHX79_003628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HDV2198749.1"
                     /translation="MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTL
                     VQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT
                     VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ
                     VIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGA
                     GWQWVNLAWLAGGLWLLWQKAIRWHIPLSFLVTLALCATLGWLFSPETLAAPQIHLLS
                     GATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANIT
                     VPLIDYYTRPRVYGHRKG"
     gene            complement(11768..>11919)
                     /locus_tag="RHX79_003629"
     CDS             complement(11768..>11919)
                     /locus_tag="RHX79_003629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="electron transporter RnfC"
                     /protein_id="HDV2198750.1"
                     /translation="ARAKARKLEQQQTNAEPEEQVDPRKAAVAAAIARAQAKKAAQQK
                     VVNED"
BASE COUNT         3071 a         2980 c         3011 g         2857 t
ORIGIN      
        1 tacatttgtt ttagcaatac aattgctgca cactattcta aaagccgcat aatatcttag
       61 caagctaatt ataaggagat gaaattggaa tcgccactag gttctgatct ggcacggttg
      121 gtgcgcatat ggcgtgctct gatagaccat cgcctgaaac cgctggagtt aacacaaacc
      181 cattgggtta cgttacacaa tatccatcag ttacctccag accagtcgca aattcaactg
      241 gcaaaagcga ttggcatcga gcagccatca ctggtccgta ctctggacca actggaagaa
      301 aaagggttaa tttcgcgtca aacttgtgcc agcgatcgtc gggctaaacg tattaaactg
      361 acggaaaagg cagagccact gatcagcgaa atggaagctg ttattaacaa aacccgcgcg
      421 gaaatattac atggcatctc cgcagaggaa ctggagcaac tgattacgct catcgcaaaa
      481 cttgagcata atatcattga gttacaggcc aaagggtgaa atgaaggggg cgtgtggtca
      541 gtaacctgac cacacgcaaa cttatttagc gcggagaaac ggtcacctga ctgccattgc
      601 tggccagtac gacacgttgg cccggagaga aacgagtgtt gccttgtttc tgtaccacca
      661 tgatggtatt accatcgtct ttacgaattt ccagctcgac accctgcgtt ttgttcattg
      721 cactctgtac gccctgacca gctacgccac ctgcaacagc gcctgctgca gtagccagag
      781 aacgcccggt tccgccacca acagtattcc ccaggaaacc accaagaaca gcaccgccaa
      841 ttgcaccgat aacgttggaa tcatcaccgc cctgaatctg taccggacgt acgttaacga
      901 tggtgccata gctgacattc tgtacttgtt tcgcttcaga agcggtataa acatcccctg
      961 acagggtgtc gttattaaca caaccgacaa gagacagacc taccattgaa acaaccaata
     1021 cgcgtttaat cattgaaaaa tctcctgttc accatgaaac gccacgcaag catccctcat
     1081 ggtcaaagta tatggcatat gtgaatccat ggttacatgt tctaccaaat atgagcaaat
     1141 cataatgaaa gtaggatcaa ccaattataa acaaaacatt catgatgatt attgatttga
     1201 agataatgtt ttactaccaa cggtaaaaat cggtcattcc gcatggtatt cacgaaaagt
     1261 ttatgtttga gtggtgcgca aacgtcagat tgaaaaagga tgaactatga aatcgggccg
     1321 ctttattggc gttatgtcag gcaccagcct tgatggtgtt gatgttgtgt tggcgacaat
     1381 agatgaacac cgggtcgcac agctggcaag cttgagctgg ccgatcccgg tgtctctgaa
     1441 acaggctgta ctggatattt gccagggcca gcagcttaca ctttcgcagt ttggacagct
     1501 tgatactcaa ctcgggcgac tttttgctga tgcggtcaat gccttgctta aggaacaaaa
     1561 cctgcaggcg agagatatag ttgcgatcgg ctgtcacggt caaaccgtct ggcatgaacc
     1621 gacgggcgtg gcaccacaca ctttacagat tggcgataac aatcaaattg tggcacgcac
     1681 cggaattacg gttgtcggtg attttcgccg tcgcgatatt gccttgggag gacaaggcgc
     1741 accgctggta cctgcgttcc atcatgcctt gctggctcac tcaaccgagc gacgaatggt
     1801 gctcaatatt ggcggcatcg ccaatctgtc actgctcatt cctgggcagc cggttggcgg
     1861 ctacgatacc ggtcctggta acatgctgat ggatgcctgg atctggcgtc aggccggtaa
     1921 accttacgat aaagatgccg agtgggcacg ggcgggtaaa gttattctcc cactgctgca
     1981 aaatatgctc agcgacccat atttctcgca acctgcaccg aaaagcaccg gacgcgaata
     2041 ctttaactac ggctggctgg agcgccattt acgccatttt ccgggtgttg atccccgtga
     2101 tgttcaggcc acactggcag aactcaccgc cgtgaccatt tctgaacaag ttttgttgag
     2161 cggtggctgc gaacgattga tggtatgtgg tggaggtagt cgtaatccgc tactcatggc
     2221 gcgtctggcg gcattactgc caggcacaga agtcatcacc accgatgccg ttggcattag
     2281 tggcgatgac atggaagcat tggctttcgc ctggcttgcc tggcggacgc tggcgggatt
     2341 accaggaaat ctgccttccg tcactggcgc aagccaggag acggtactgg gggctatttt
     2401 ccctgctaac ccgtgatatc agagttaact gaatttttct taccgcgtct gccgttacac
     2461 ttggaacgtt agggagggcg tattgccctc cagaccagga aagtcttcgg gaaatgtcta
     2521 tgaaaaaact gttactgatc tgtttgccgg tgcttctcac cggctgtagc gcgttcaatc
     2581 aactggttga gcacatgcaa accgctacgc tggaatacca gtgtgatgaa aaaccgttga
     2641 cggtcaaact gaataatccg cgccaggaag tcagttttgt ttacgataat caactactgc
     2701 atctcaaaca gggcatttca gcgtctggtg cacgttacac tgacggaatc tatgttttct
     2761 ggtcgaaagg cgatgaagcg actgtctata aacgcgaccg catcgtcttg aataactgtc
     2821 agttacaaaa tccacagcgt tgagattttt ccaggggcgg cgcacaatag cgtcacccac
     2881 tgacaatccg taaagaaaac catgtctgat aacgacgaat tgcagcaaat cgcgcatctg
     2941 cgccgtgaat acaccaaagg cgggttacgc cgtcgcgatc ttcccgccga tccattaacc
     3001 ctttttgaac gttggctctc tcaggcgtgt gaagccaaac tggcagaccc taccgcgatg
     3061 gtggtcgcta ccgtggatga acatgctcag ccttatcaac gcatcgtttt actcaaacat
     3121 tacgacgaaa aaggcatggt gttttacacc aacctcggta gccgtaaagc acatcaaatt
     3181 gaaaataatc cgcgcgttag cctgctgttc ccgtggcata cccttgaacg ccaggtgatg
     3241 gtgatcggta aagcagaacg actttcgact ctcgaagtga tgaaatattt tcatagccgc
     3301 ccgcgtgata gccagattgg tgcatgggtt tcgaagcagt ccagtcgcat ttctgcccgc
     3361 ggtatccttg aaagtaaatt cctggagctg aagcagaagt ttcaacaggg cgaagtgcca
     3421 ttgccgagct tttggggcgg ttttcgcgtc agccttgaac agattgagtt ctggcagggc
     3481 ggtgagcatc gcctgcatga ccgctttttg taccagcgag aaaatgatgc gtggaagatt
     3541 gatcgtcttg caccctgaaa agatgcaaaa atcttgcttt aatcgctggt actcctgatt
     3601 ctggcacttt attctatgtc tctttcgcat ctggcgaaaa gtcgtgtacc ggcaaaggtg
     3661 cagtcgttat atacatggag attttgatgg caagcagtaa cttgattaaa caattgcaag
     3721 agcgggggct ggtagcccag gtgacggacg aggaagcgtt agcagagcga ctggcgcaag
     3781 gcccgatcgc gctctattgc ggcttcgatc ctaccgctga cagcttgcat ttggggcatc
     3841 ttgttccatt gttatgcctg aaacgcttcc agcaggcggg ccacaagccg gttgcgctgg
     3901 taggcggcgc gacgggtctg attggcgacc cgagcttcaa agctgccgag cgtaagctga
     3961 acaccgaaga aactgttcag gagtgggtgg acaaaatccg taagcaggtt gccccgttcc
     4021 tcgatttcga ctgtggagaa aactctgcta tcgcggcgaa caactatgac tggttcggca
     4081 atatgaatgt gctgaccttc ctgcgcgata ttggcaaaca cttctccgtt aaccagatga
     4141 tcaacaaaga agcggttaag cagcgtctca accgtgaaga tcaggggatt tcgttcactg
     4201 agttttccta caacctgttg cagggttatg acttcgcctg tctgaacaaa cagtacggtg
     4261 tggtgctgca aattggtggt tctgaccagt ggggtaacat cacttctggt atcgacctga
     4321 cccgtcgtct gcatcagaat caggtgtttg gcctgaccgt tccgctgatc actaaagcag
     4381 atggcaccaa atttggtaaa actgaaggcg gcgcagtctg gttggatccg aagaaaacca
     4441 gcccgtacaa attctaccag ttctggatca acactgcgga tgccgacgtt taccgcttcc
     4501 tgaagttctt cacctttatg agcattgaag agatcaacac cctggaagaa gaagataaaa
     4561 acagcggtaa agcaccgcgc gcccagtatg tactggcgga gcaggtgact cgtctggttc
     4621 acggtgaaga aggtttacag gcggcaaaac gtattaccga atgcctgttc agcggttctt
     4681 tgagtgcgct gagtgaagcg gacttcgaac agctggcgca ggacggcgta ccgatggttg
     4741 agatggaaaa gggcgcagac ctgatgcagg cgctggtcga ttctgaactg caaccttccc
     4801 gtggtcaggc gcgtaaaact atcgcctcca atgccatcac cattaacggt gaaaaacagt
     4861 ccgatcctga atacttcttt aaagaagaag atcgtctgtt tggtcgtttt accttactgc
     4921 gtcgcggcaa aaagaattac tgtctgattt gctggaaata atgcattaag tggaaagggg
     4981 gagtgagaaa tcactccccc tggtttttat acagggaaca tgatgaaaaa tattctcgct
     5041 atccagtctc acgttgttta tggtcatgcg ggtaacagtg cggcagagtt tcctatgcgc
     5101 cgcctgggcg cgaacgtctg gccgctgaac accgttcaat tttctaatca cacccaatac
     5161 ggcaaatgga ctggctgcgt gatgccgccc agccatttaa ccgaaattgt gcaaggcatt
     5221 gccgccattg ataaattaca cacctgtgat gccgtgttaa gtggctatct gggatcggcg
     5281 gagcagggtg aacatatcct cggtatcgtc cgtcaggtga aagccgcgaa tccgcaggcg
     5341 aaatattttt gcgatccggt aatgggtcat ccggaaaaag gctgtatcgt tgcaccgggt
     5401 gtcgcagagt ttcatgtgcg gcacggtttg cctgccagcg atatcattgc gccgaatctg
     5461 gttgagctgg aaatactctg tgagcatgcg gtaaataacg tcgaagaagc ggttctggca
     5521 gcgcgcgaac tcattgcgca agggccacaa attgtgttgg ttaaacacct ggcgcgagct
     5581 ggctacagcc gtgaccgttt tgaaatgctg ctggtcaccg ccgatgaagc ctggcatatc
     5641 agccgtccgc tggtggattt tggtatgcgc cagccggtag gtgttggtga tgtgacgagc
     5701 ggtttactgc tggtgaaact gcttcagggg gcaacgctgc aggaggcgct ggaacatgtg
     5761 accgctgcag tctacgaaat catggtgacc accaaagcaa tgcaggaata tgagctgcaa
     5821 gtggtggctg ctcaggatcg tattgccaaa ccagaacatt acttcagcgc aacaaagctc
     5881 tgaaatatct catttcggcc cacaacgacc tgtgggccga tggatattac tttaagcctt
     5941 ccgctgacag cgcgtcttgt acttccggac gttcagccat acgttgcata aatgctgcaa
     6001 tgtgctctaa cccttccaga ttcagtttca ccgcgtatgc ccagcgcaga accgtaaaca
     6061 gataggcatc agcaattgta aatctttgcc cgcagatcca gtgctcatcc ttcagtgcct
     6121 cgttcacata ttgcagcttc ttctccagct gcgcgcgaac tgtcggtttg tactcttccg
     6181 gtgtatcagg gcgaaacaga ggtgtgaaac ctttatgcag ctcggtggcg atgtaattca
     6241 gccattcgat ggttttatag cgggaaatac tgtttaccgg tgccagcaac tggcggtcgg
     6301 ggacgctgtc ggcaagatac tgcataatcg ctacgccttc cgtcagcaaa gtaccgtcat
     6361 ccagcagcaa tgcaggcacc tgccccttag ggttaacgac aaagtaatcg tcaccgtttt
     6421 cgagacgttt tttcattaaa tccacactga cgagggtaaa atcctttccg ctctcacgca
     6481 gggtgatatg ggaagcgaga gagcaggcac ccggtttgta gaacaatttc atcggtaact
     6541 ccttttgtct gtggtttaaa gtatggtagt gcgttgctga acaaaaaaaa agccgctaac
     6601 gaaaagttag cggcttgtaa aagagtttcc ctgaatttta cgctacagca gctttcgccg
     6661 ctttgtctgc agcgtcatcc tgcgtcatac ggtgcagttt aggcgcggtc agcagcatca
     6721 gtactgcaat aatggcagta gcgacaccaa tctgcaagaa tacgcgacca taaacttcca
     6781 gtgacatcag cgggtcggta acgttatccg gcacagccat catacccgca acataaccac
     6841 caatcaggtt tgcaccggca gtggtcagga accagctacc cataatgaag cccatcagac
     6901 gctgcggaac gagttgtgca accattgcca gacccagacc agagatcatc agttccccga
     6961 tgctctgcag gccatagctt gcgaccagcc agcttacaga cacgatacca gcgtcagacg
     7021 cgaatttcgc acccagcggc agaatcagga acgcaccaga acacatcacc atgccgattg
     7081 caaacttggt tggcatcggc agggtatcgc ccatcttgtt atagatagcg gccagaatcg
     7141 gactaccgat gatgatccag aacgggttca gtgcctgata ctgctcaggt tctacggcca
     7201 gacccagaat ggagtgctca acgttacgaa tcgcaaagaa gttcagtgac gttggcatct
     7261 ggctgtacag cacgaagaag ataatggctt cgagcatcag gatgaaggca acgatcattt
     7321 tacgacgcgc agcacctttc atcgcgaagg cttctttacc gaagataacc acgataccga
     7381 aggcaacaac gcccagcgcc atacgcgcaa cttcctgatt gtgcagcagc caggtggcga
     7441 tagcgatcag tgccacaaca ccaataatgg tcagcagcag gttacggtag ttgataggct
     7501 cgaagtctgg ttttgaaccg tactgtttaa cccagcgttg gcagaaggcg aagttaacga
     7561 tagtgatcag caggcctaca acgctcaacg caaacgcaac actccagccg tatttcgcgg
     7621 ccagccacgg cgtagcaatc atagagaaga aagagccgat gttgacggac atgtagtaca
     7681 tggtgaatgc accgtccaga cgcgggtcgt ttttctcata gcatgtagaa agcagagaag
     7741 acgggttagc tttaaacagg ccgttaccga ccgcaatagc cgccataccc atataaacga
     7801 taccggcgtc gtgaccagac caggcaacca gagcataacc aatcgccagc acaatagcgc
     7861 cgagcataat tacgcgttta gtacccagta ccttgtcacc taaccagccg ccgatagcga
     7921 ccagaccata aaccagggca ctaaaggaag agaaaagggt gattgaatcc gcttcagaca
     7981 tacccagttg tttaaccagg taaacagcca taattccttg taggccgtaa taaccaaaac
     8041 gttcccataa ctcaatcgag aagatgagat agaacgcctt cggttgtttg aaagcgttca
     8101 aactgacgct ttcagttggt ttttggtttg cagtggacac ttttacctct ttttttacat
     8161 cccatattaa cgggggtgct ttctcgcgtt atgtctaaaa aacatacgcg caattgttat
     8221 agtgggaggg gaaacggcag gtaatgttca ctatcttgca ctttcagaca agtcctttgt
     8281 aataatctgt tacatataac tgaggcgggg aattcaacca ttccgggaaa tgttatccag
     8341 cgttaaattt ttcaaaaaac gtaacggcag attttttcac tgcactgaga ggggggtgat
     8401 ggcttaacgg cgatatgttc tgctatttag cgtttttact agtgagatag tccagtttct
     8461 gaaaaatagc cagtgtaatg ttttgtaggt caatatttgt tgcgtgtgta aatttaaatg
     8521 attttaacct gattcttgca atgtttttac attgccacag catcgtgatc ttgatcacga
     8581 atgaatagaa aatttcgcta ttaaaaaaac aattaacctg catttttggt tatccgcaaa
     8641 cggattacct gatgataacg ctaagcaatg gcatcattga cgttaaaaag atgttttaaa
     8701 agaggataaa gaaaggttat caatggggta atcggtgtta ccccttttct tcagatgtca
     8761 actttctctt tgtattcaca aagatcttca ataatacaag agccacagcg gggcttgcgg
     8821 gcaatgcagg tataacgccc gtgcaggatc aaccaatggt ggcagtcgac tttaaactct
     8881 gccggaacca ctttcagtag cttttcttct acctgttcga catttttccc cggcgcaaat
     8941 tgagtacgat tacaaacgcg gaaaatgtgc gtgtcgacag caatagtcgg ccagccgaat
     9001 gcagtgttta atacgacgtt ggctgtttta cgacctacgc cgggcagggc ttcaagcgca
     9061 gcacgatctt ccggaacctc gccattatgc tgctccagta agatacggca ggttttgatg
     9121 atattttctg ctttgctgtt ataaagccca atcgttttga tataggtttt aaccccttca
     9181 acgcccagtt caagcatcgc tgcaggcgta ttcgccaccg ggtagagttt cgccgtcgcc
     9241 ttattaacac tgacatcggt cgcctgagcg gaaagcagta cggcaatcag caattcaaaa
     9301 ggcgaactga aattaagctc ggtggtggga tgaggattgt tctcacgcag gcgagtgagg
     9361 atctccaggc gttttgcttt gttcatcaga cattccctgt ttcaccgttt ggcaatgcac
     9421 gttcggcagc tgcttcagta cggcgctttt tcattctttc atcaatcagg tattttcctg
     9481 ccagcatcag tcccaggcca ataaatgcac ctggaggcag catcgccagc aggaaagggg
     9541 agtcggtgtg gaaaatttcc acgcgtaata cttttgccca gctacctaac agcgcatctg
     9601 caccgtcaaa caatgtgcca ttgccgataa tttcgcgtag tgaacccagc acgaacatgg
     9661 cgcaggttgc gcccatacca attgaaaagc cgtccagtgc cgaaagcgcc ggaccttttt
     9721 tggcggcgaa ggcttcagcg cggcccacaa cgatacagtt agtgacaatc agcggaataa
     9781 aaatccctaa tgattgatac aggccaaagg cgtaggcgtt gatcagcatc tgtacagcgc
     9841 tgaccaccga ggcgatgatc atcacgtaaa tgggaatgcg gatctcggct ggcgtccagt
     9901 gacgcagcgt cgaaatggtc aggttggtca gcgtcagtac cagcgtagtc gcaagtccta
     9961 aacccagagc gttagtggca gtggacgtga ccgccaacag aggacaaagg ccgagcaact
    10021 ggaccagcgc agagttgttt ttccacaacc cctgaacaat aacgtcttta atttcgctca
    10081 cgctttattc tccacaggca ggaagttgag aaagttgtgc cggtaacgtc tgagcgtaca
    10141 atccggcgcg ttttaccgca ttaaccaccg cgcggggagt aatcgtcgcg ccggtgaact
    10201 ggtcgaaatc accaccatct ttcttcaccg cccagtgcgc atcatctgca ccactgattt
    10261 ttttacccgc aaaatgggtg atccagtcag aaaggcgcag ttcgatttta tcgccaagcc
    10321 ctggcgtttc gtggtgctct gtcacgcgcg tgccaagtac cgtgccgtta aaatcggctc
    10381 ccaccagcag ctgaatcgca ccggaatagc catctggcgc ggttgcttcc agaacggcgg
    10441 ctaccggttt gtcatcctgt ttggcgatgt aaacccgatg ctcaccttta cctaactctg
    10501 gcgcagttac cagatagcaa ctctgtgcca gcgcattgtt atagcgttcg gctggcagca
    10561 cctgatcaaa taatgccttt tgttgcagac tggcctgttc agcaatcgtc gttttggtca
    10621 tctggttgat ggccgcagtt aaccctgttg aacccgctgc aaatagcgct aacgtaatgc
    10681 cgtgttttcg gatagttttc agcatggttt accctttgcg atggccgtag acgcgcggac
    10741 gcgtgtagta atcgatcaga ggaaccgtga tgttcgccag caggacggca aaagccacgc
    10801 cgtcaggata gccgccgaaa ctgcggatca accagactaa taagcccgca agcgcgccga
    10861 aaataagacg accacgattg gtcgtagaag cggtaaccgg gtcagtcaaa ataaagaatg
    10921 cgccgagcat ggtcgcacca gacagcagat gaatttgcgg tgctgccagt gtttctggtg
    10981 agaacaacca gcccaacgtt gcgcataacg ccagcgttac taagaagctg aggggaatat
    11041 gccagcgaat cgctttctgc catagcaacc acaggccgcc agccagccag gcgagattta
    11101 cccattgcca accagcgccc gccagaatac cgctgtagat cggatattgc ataatctgtt
    11161 caaccgaatg accggcacgg acagaggttt taaatgtatc cagcggtgtc gcctgactaa
    11221 tgccatcaat acctaagcgt agtgtgttca tatcaccacc actggcggta tgcccgctga
    11281 aaataacctg tatggcgtcg ataaaaccag ggatgttgac cgcaatttca tgtggcggta
    11341 accagctggt catctgcacc gggaaggaga tcagtaagac cacataacca atcattgctg
    11401 gattaaacgg gttttgcccc agaccgccat acaactgttt agcgatgatc accgcaaaca
    11461 ccgtacccag cacgaccatc caccatggcg cgaggggggg aatacttacc gccagcaata
    11521 agcctgtcag caatgctgag ttatctttca acgttgcggc taccgactgc ttgcgtagtt
    11581 tgagtacgag agcttcggct aacagagcac taaccgatgc caacaggatc tgaacgagag
    11641 taccccaacc aaaaaaccac agttgcgctg cgattcctgg cacggctgcg agcaacacca
    11701 acagcataat gcgcgatgtc tggcgctggt tatgggtata aggggagcta gctattctga
    11761 ataccattta gtcctcgttt acaaccttct gctgggcggc ttttttggcc tgagcgcggg
    11821 caatagccgc ggcaactgcc gctttgcgcg gatcaacctg ttcttctggt tctgcgttag
    11881 tctgttgctg ttccagcttg cgcgctttgg cacgggcaa
//
LOCUS       DAPGWB010000139        11755 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.141, whole genome shotgun sequence.
ACCESSION   DAPGWB010000139 DAPGWB010000000
VERSION     DAPGWB010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11755
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.141"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(27..308)
                     /locus_tag="RHX79_003630"
     CDS             complement(27..308)
                     /locus_tag="RHX79_003630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehE family protein"
                     /protein_id="HDV2198751.1"
                     /translation="MNKYWLSGIIFLAYGLASPAFSSETATLTINGRISPPTCSMAMV
                     NGQPQQHCGQLTYNVDTRHLFSSPVKGVTTEVVVAGSDSKRRIVLNRYD"
     gene            complement(571..1680)
                     /gene="apbC"
                     /locus_tag="RHX79_003631"
     CDS             complement(571..1680)
                     /gene="apbC"
                     /locus_tag="RHX79_003631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HDV2198752.1"
                     /translation="MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAW
                     MDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPG
                     INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQ
                     RPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDY
                     LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE
                     NMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRP
                     ESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV"
     gene            1812..3845
                     /gene="metG"
                     /locus_tag="RHX79_003632"
     CDS             1812..3845
                     /gene="metG"
                     /locus_tag="RHX79_003632"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDV2198753.1"
                     /translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGH
                     EVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEE
                     NRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE
                     VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANK
                     MQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSV
                     SFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKM
                     SKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVN
                     LASRNAGFINKRFDGVLASELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALAD
                     LANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLN
                     TELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKAAAAPVTGPLADDP
                     IQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQ
                     ALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK"
     gene            3986..7780
                     /locus_tag="RHX79_003633"
     CDS             3986..7780
                     /locus_tag="RHX79_003633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001215568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WGR and DUF4132 domain-containing protein"
                     /protein_id="HDV2198754.1"
                     /translation="MRHFIYQDEKSHKFWAVEQQGNELHISWGKVGTKGQSQIKSFSD
                     AAAAAKAELKLIAEKVKKGYVEQAKDNSLQPSQTVTGSLKVADLSTIIQEQPSFVAET
                     RAPDKNTDAVLPWLAKDIAVVFPPEVVHTTLSHRRFPGVPVQQADKLTQLRRLACSVS
                     QRDNKTATFDFSACSLEWQNTVAQAISQIDGLKTTQLPSPVMAVLTALEMKCTRYKVR
                     EDVMDQIVQEGGLEYATDVIIHLQQIDIKWDYANNVIIILPSGIAPDYLEQYSRFELR
                     LRKHLSLAEESLWQKCAQKLIAAIPHIPEWRQPLIALLLPEKPEIAHEIAQRLLGQKK
                     LPSLEWLKIVATDEHILASLEKYHEPYAIFDDYYCGAIWSATVLQEQGVAALPRFAPY
                     TASDYCADVLRHINHPFALTLLIRVAGHTKRCHDRMTKACAAFPHAAMAALTELLGQK
                     EENSWRIMLMTMLISQPALAEQVIPWLSTPAVAVLKSCQQQLTQPSNHASADLLPAVV
                     VSPPWLSKKKKSPIPVLDLAPLGIEPICYLTEEISNQLLAKYIWYSKHITVSHEESTT
                     NLLARMGFQRRIAGTYIKAPEAVVEAWLNEDYSTLLSEFKVFHSPTGHYWQLGILTTL
                     PLEKAVKAWNALTLSPHTDTEYAMLHFGLKGLPGLVNSLARYPQEALPITNYFAASEL
                     APAVARAFNKLKTLRENARSWLLKYPEHALTGLLPAALGKAGEAQDNARAALRMLTEN
                     GHQPLLQEIARRYNQPEVTDAVNALLALDPLDNHPTKIPTLPAFYQPSLWTRPVLKAN
                     AQSLPDSALLHLGEMLRFPQEEALYPGLLQVKDVCSADSLAGFAWDLFTAWQTAGAPS
                     KESWAFTALGVLGNDDTARKLTPLIRAWPGESQHKRATVGLDILAAIGSDIALMQLNG
                     IAQKLKFKALQERAKEKIADIAESRELTVAELEDRLAPDLGLDDNGSLLLDFGPRQFT
                     VSFDETLKPFVRDVSGSRLKDLPKPNKSDDETRANDAVNRYKLLKKDARTIAAQQVAR
                     LESAMCLRRRWSLENFQLFLVEHPLVRHLTRRLIWGVYSAENQLLACFRVAEDNSYST
                     ADDDLFTLPEGDISIGTPHVLEISPTDAAAFGQLFADYELLPPFRQLDRNSYALTEAE
                     RNASELTRWAGRKCPSGRVMGLANKGWVRGEPQDGGWIGWMIKPLGRWSLIMEIDEGF
                     AVGMSPAELSAEQLLSKLWLWEGKAESYGWGSNSTQEAQFSVLDAITASELINDIEAL
                     FE"
     gene            7790..11422
                     /locus_tag="RHX79_003634"
     CDS             7790..11422
                     /locus_tag="RHX79_003634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4132 domain-containing protein"
                     /protein_id="HDV2198755.1"
                     /translation="MDKELPWLADNAQLELKYKKGKTPLSHRNWPGEPVPVITESIIQ
                     TLGDELLQKAEKKKNIVWRYENFSLEWQSAITQAINLIGEHKPSIPARTMAALVCIAQ
                     NDSQQLLDEIVQQEGLEYATEVVIARQFITRCYESDPLLVTLQYQDEDYGYGYRSETY
                     NEFDLRLRKHLSLAEESSWQRCADKLIAALPGIPKIRRPFIALLLPEKPEIANELASL
                     ESSRSSLHSKEWLKVIATDNTAVKKLERCWGLDVFSDREASYMSHENHFGYAACAALL
                     REQGLAAVPRLAIYAHKEDCGSLLVQINHPQVIRTLLLVADKNKPSLQRVAKYSKNFP
                     HATLAALAELLALKEPPARPGYPIIEDKKLPAQQKARDEYWRTLLQTLIASQPQLAER
                     VMPWLSTQARAVLNSYLSAPPKPVIDSTDNSSLPEMLVSPPWRSKKKMTAPRLDLAPL
                     ELTPQIYWQPGEQERLAATESARYFSTESLAERMEQKSGRVVLQELGFGDDVWLFLNY
                     ILPGKLDAARNSLIVQWHYYQGRVEEILNGWNSPQAQLAEQALRSGHIEALINIWEND
                     NFSRYRPEKSVWNLYLLAQLPREMALTFWLRIIEKKHLFAGEDYFLSILGLDALPGLL
                     LAFSHRPKETFPLILNFGATELALPVARVWRRFAAQRDLARQWILQWPEHTASALIPL
                     VFTKPSDNSEAALLALRLLYEQGHGELLQTVANRWQRTDVWSALEQLLKQGPMDIYPA
                     RIPKAPDFWHPAMWSRPRLITNNQPVTGDALEIIGEMLRFTQGGRFYSGLEQLKTFCQ
                     PQTLAAFAWDLFTAWQQAGAPAKDNWAFLALSLFGDESTARDLTTQILAWPQEGKSAR
                     AVSGLNILTLMNNDMALIQLHHISQRAKSRPLRDNAAEFLQVVAENRGLSQEELADRL
                     VPTLGLDDPQALSFDFGPRQFTVRFDENLNPVIFDQQNVRQKSVPRLRADDDQLKAPE
                     ALARLKGLKKDATQVSKNLLPRLEAALRTTRRWSLADFHTLFVNHPFTRLVTQRLIWG
                     VYPANEPRRLLNAFRVAAEGEFCNAQDEPIDLPADALIGIAHPLEMTAEMRSEFAQLF
                     ADYEIIPPLRQLTRRTVLLTPDESASNSLNRWEGKSATVGQLMGMRYKGWESGYEDAF
                     VYDLGEYRLVLKFSPGFNHYNVDSKALMSFRSLRVYSDNKSVTFAELDVFDLSEALSA
                     PDVIFH"
     gene            11483..>11755
                     /locus_tag="RHX79_003635"
     CDS             11483..>11755
                     /locus_tag="RHX79_003635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198756.1"
                     /translation="MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLER
                     FRLRPTFHQRDREDADPLINDALIYIRDECIDERKLRGESPETVIAI"
BASE COUNT         3059 a         3006 c         2913 g         2777 t
ORIGIN      
        1 aatgcaatta aaatcaggtt gccaaattaa tcgtagcgat ttaacacgat tcgacgtttg
       61 ctatcgctac ctgcaacaac cacttctgtc gttacacctt tgacgggcga agaaaacaga
      121 tgacgggtgt caacattata cgttaactga ccacaatgct gttgaggttg accattaacc
      181 atagccatac tgcatgttgg gggactgatc ctgccattaa tcgttaatgt ggcagtctct
      241 gaagagaatg cgggagaagc caatccatag gcaagaaaaa taattcctga cagccaatac
      301 ttattcattg aacgttatcc ctgtagtaaa ggttatgcct ggatagaatg agtgcataac
      361 aaactatagc tgtacatcca ctacacagcc acgaaggatg ataatgaagc attgcctgta
      421 tgatcaatcg actttgtaga gtttcggacg aaggtccgca gaatattcgc agtattaaat
      481 aagtgttcat taatgcggca aaaactaata caccgcatca atgtaacatc tctgcggtgt
      541 atgaagaata accagaatgg ttaataggcg ttagaccgcg cggaaggaaa tctcgcctgg
      601 aatgacttca ccctgccagt agagctgagc tgcaacgcgg tcagccagct ggcggtagat
      661 agcggtaaat tcgctctccg gacggctgat aaccgttggc gtgcctttat cgagatcctc
      721 acgtaaggag atgtgtaacg gcatctgccc cagcagctgt gtgtggtatt tttcagccag
      781 tttctcagca ccaccggtac cgaaaatcgg ttcatggtga ccacagttac tgcaaatatg
      841 cacactcatg ttctcgacaa taccaagcac cggaacctcg actttctcga acatcacaat
      901 gccttttttc gcatcgatca acgcgatgtc ctgcggggtg gtgaccacga ctgcaccagt
      961 tactggaatg ttttgcgcca gcgtcaattg aatgtcaccg gtgcctggcg gcatatcaag
     1021 caccagatag tcgagatccg gccacaaggt ttcctgcaac atctgcatta acgccttgct
     1081 cgccatcggt ccacgccaca ccatcgcatt gtcgtcagtg accagataac caattgaatt
     1141 ggttgccagg ccatgagaca taatcggtgc catgtgggta ccgtccggcg acgttggacg
     1201 ctgattttct gcgcccagca tggtgggaat tgatgggccg tagatatcgg cgtccagaat
     1261 gccgactttc gccccttccg ccgccagtgc cagcgccagg tttaccgccg tggaggattt
     1321 acccacgccg cctttaccgg aactgaccgc aatgatgttc ttcacaccat taatacccgg
     1381 ctgattcttc acgcgtttta aggtggcgat attgtgcgac agtttccagt cgatagcttt
     1441 cgccccggtg atacgcagca gttcggcgct acattgctct tttaactctt caaacgcgct
     1501 atgccagacg aatggcataa ccagttccac atgcaacgtg tcgtccatcc aggcgacatg
     1561 gtgcaacgct ttcagcgtgg tgaggttatg cttcagggtt gggtgctgaa aattggccag
     1621 tgtcccggcg accattgcgc gcaaggcttc tggtgatttg gcctgggatt gttcgttcat
     1681 cccgactcct tttttgtata gataaaccat cagctgatag tttacctgaa gaatatagag
     1741 aagtacttac ttaacatttt cccatttggt actatctaac cccttttcac tattaagaag
     1801 taatgcctac tatgactcaa gtcgcgaaga aaattctggt gacgtgcgca ctgccgtacg
     1861 ctaacggctc aatccacctc ggccatatgc tggagcacat ccaggctgat gtctgggtcc
     1921 gttaccagcg aatgcgcggc cacgaggtca acttcatctg cgccgacgat gcccacggta
     1981 caccgatcat gctgaaagct cagcagctcg gtatcacccc ggagcagatg attggcgaaa
     2041 tgagtcagga gcatcagact gatttcgcag gctttaacat cagctatgac aactatcact
     2101 cgacgcacag cgaagagaac cgccagttgt cagaacttat ctactctcgc ctgaaagaga
     2161 acggttttat taaaaaccgc accatctctc agctgtacga tccggaaaaa ggcatgttcc
     2221 tgccggaccg ttttgtgaaa ggcacctgcc cgaaatgtaa atccccggat caatacggcg
     2281 ataactgcga agtctgcggc gcgacctaca gcccgactga attgatcgag ccgaaatcgg
     2341 tggtttctgg cgctacgccg gtaatgcgtg attctgaaca cttcttcttt gatctgccct
     2401 ctttcagcga aatgttgcag gcatggaccc gcagcggtgc gttgcaggag caggtggcaa
     2461 ataaaatgca ggagtggttt gaatccggcc tgcaacagtg ggatatctcc cgcgacgcgc
     2521 catactttgg ttttgaaatt ccgaacgcgc cgggcaaata tttctacgtc tggctggacg
     2581 caccgattgg ctacatgggt tctttcaaga atctgtgcga caagcgcggc gacagcgtaa
     2641 gcttcgatga atactggaag aaagactcca ccgccgagct gtaccacttc atcggtaaag
     2701 atattgttta cttccacagc ctgttctggc ctgccatgct ggaaggcagc aacttccgca
     2761 agccgaccaa cctgtttgtt catggctatg tgacggtgaa cggcgcaaag atgtccaagt
     2821 ctcgcggcac ctttattaaa gccagcacct ggctgaatca ttttgacgct gacagcctgc
     2881 gttactacta cactgcgaaa ctctcttcgc gcattgatga tatcgatctc aacctggagg
     2941 atttcgttca gcgtgtgaat gccgatatcg tgaacaaagt ggttaacctg gcctctcgta
     3001 atgcgggctt tatcaacaag cgttttgacg gcgtgctggc aagcgaattg gctgacccgc
     3061 agttgtacaa aaccttcact gatgccgctg aagtgattgg tgaagcgtgg gaaagccgcg
     3121 aatttggtaa agcagtgcgc gaaatcatgg cgctggctga tctggctaac cgctatgtcg
     3181 acgagcaggc tccgtgggtg gtggcaaaac aggaaggccg cgatgccgac ctgcaggcaa
     3241 tttgctcaat gggcataaac ctgttccgcg tgctgatgac ttacctgaag ccggtactgc
     3301 cgaaactgac cgagcgcgca gaagcattcc tcaatacaga actgacctgg gatggtatcc
     3361 agcaaccgct gctgggccac aaagtgaatc cgttcaaagc gctgtataac cgcatcgata
     3421 tgaagcaggt tgaagcactg gtggaagcgt ctaaagaaga agtgaaagca gctgccgcgc
     3481 cagttactgg cccactggca gatgatccga ttcaggaaac catcaccttt gacgacttcg
     3541 caaaagttga cctgcgcgtg gcgctgatcg aaaacgcaga gtttgttgaa ggttctgaca
     3601 aactgctgcg cctgacactg gatctcggcg gtgaaaaacg caatgtcttc tccggtattc
     3661 gttctgccta cccggatccg caggcactga tcgggcgtca caccattatg gtggccaacc
     3721 tggcaccgcg taaaatgcgc tttggtatct ccgaaggcat ggtaatggct gctggtcctg
     3781 gcgggaaaga tatcttcctg ttaagcccgg atgctggtgc taaaccaggc catcaggtga
     3841 aataatcccc ctttaaggcg ctgcatcgac agcgcctttt ctttataaat tcctaaagtt
     3901 gttttcttgc gattttgtct ctctctaacc cgcataaata ctggtagcat ctgcattcaa
     3961 ctggataaaa ttacagggat gcagaatgag acactttatc tatcaggacg aaaaatcaca
     4021 taaattctgg gcagttgagc aacagggaaa cgagttgcat atcagttggg gaaaagttgg
     4081 caccaaaggg caaagccaga taaaaagttt ttcagatgct gcggcagcgg caaaagcgga
     4141 gcttaagctg attgcggaga aggtgaagaa ggggtatgtg gagcaagcga aggataattc
     4201 tttgcaacct tcccaaacgg taacgggctc tctcaaggta gcggacttat ccaccattat
     4261 tcaggaacaa ccctctttcg tagcagaaac ccgtgcgcct gacaaaaata cagatgctgt
     4321 tttaccgtgg ctggcgaaag atattgctgt cgtttttccg cccgaagttg tacacaccac
     4381 gttaagtcat cgccgctttc ccggagttcc tgttcagcaa gcagacaaat tgacccaatt
     4441 acgtcgctta gcctgtagtg tgtcgcaacg ggataataaa acagccacat ttgacttcag
     4501 cgcctgttct ttagaatggc aaaacaccgt cgcccaggcg atcagtcaga tcgacggcct
     4561 gaaaacaaca cagctaccat caccagtaat ggctgtactc acggcacttg aaatgaaatg
     4621 cacaagatat aaagtgcgtg aggatgttat ggatcagatc gtccaggaag gcggtctgga
     4681 atatgctact gatgtaataa tacaccttca acagattgat attaaatggg attatgcgaa
     4741 taatgtcatt attattctgc cgtctggcat tgcacctgac tacttggagc aatattccag
     4801 atttgaatta cgcctacgta aacatttatc actggcggaa gagtctctct ggcaaaaatg
     4861 tgcacaaaaa cttattgccg caattccaca tattccagaa tggcggcaac cattaattgc
     4921 tttgttatta cccgaaaaac cagaaattgc acatgaaatt gcccagcgtc tactggggca
     4981 aaaaaaatta ccctcgcttg agtggttaaa aatagtggcg actgatgagc acattcttgc
     5041 ctcattagaa aaatatcacg agccatatgc catttttgat gattactatt gtggtgcgat
     5101 atggtcagcc accgtattac aggagcaagg tgttgcagcc ctgccccgat ttgctcccta
     5161 taccgcaagt gactactgcg ccgatgtgtt gcgtcatatc aatcatccgt tcgcattaac
     5221 actgcttata cgtgtagccg ggcatactaa acgctgtcac gatcggatga cgaaagcctg
     5281 cgctgcgttc ccacatgcag caatggcggc actgacggaa cttcttgggc aaaaagaaga
     5341 gaacagttgg cgcattatgc taatgacaat gcttatctca caaccagcac tggcagaaca
     5401 ggtcattccc tggctctcga cacccgcagt tgccgtactg aaatcatgcc agcaacaact
     5461 gacacagccc tcaaaccatg ccagcgccga tctactgcca gccgtagtag tctcccctcc
     5521 ctggctttcg aaaaagaaaa aatcgccgat tccggtgctg gatttagcgc cattaggcat
     5581 tgagccaatc tgttatctga cagaagaaat cagtaatcaa cttttggcga aatatatctg
     5641 gtattcaaaa cacatcacgg ttagccatga agaaagtact accaacctgt tggcaaggat
     5701 gggttttcaa cgacggatcg ctggtacata tattaaagct cccgaagcgg tagttgaggc
     5761 atggctaaat gaagattatt caaccttact aagtgaattt aaggtgtttc attcacctac
     5821 cgggcattat tggcagttgg ggattttgac aacattgccg ctggagaaag cagtaaaagc
     5881 atggaatgcc cttaccctat ctccacatac cgataccgaa tacgccatgt tacattttgg
     5941 actcaaaggg ttacctgggt tagtaaactc acttgcacgc tatccacaag aagccttgcc
     6001 catcacgaat tacttcgcag cgagtgagct ggctcctgcc gtcgcccgtg ccttcaacaa
     6061 actgaaaacg ctacgcgaaa acgcccgtag ctggctgttg aaatacccgg aacatgccct
     6121 taccggcctg ctgcctgcgg cgctcggcaa agccggtgaa gcacaggata acgcccgcgc
     6181 tgccttgcgt atgcttaccg aaaacggtca tcagccatta ctgcaagaaa tcgcccgacg
     6241 ttataaccag ccggaagtaa ccgatgcggt gaacgctctg cttgcgctcg atcccttaga
     6301 taatcacccg acaaaaatcc ccactcttcc ggccttttat cagccatcgc tctggacgcg
     6361 cccggtatta aaagcaaatg cccaatcact gccagatagc gccctcctcc acctcggtga
     6421 aatgctccgc ttccctcagg aagaggctct gtatccggga ttattgcagg tgaaagacgt
     6481 ctgttccgcc gactcactgg cgggatttgc ctgggatctg tttaccgcct ggcagaccgc
     6541 tggcgcgccg tcgaaagaga gttgggcgtt cactgcgtta ggcgttctcg gtaacgatga
     6601 caccgcccgc aaactgacgc cattaatacg cgcctggcct ggtgaatccc agcataaacg
     6661 cgccaccgtt gggttggata ttctcgctgc tatcggtagt gatatcgccc ttatgcagct
     6721 taacggcatc gcccagaaac tgaaattcaa agcattacag gagcgggcaa aagaaaaaat
     6781 tgccgacatt gccgagagcc gcgaactcac ggtggcggag cttgaagatc ggttagcacc
     6841 ggatctcggt ctggatgata acggttcgct gctgctggat tttggcccac ggcagttcac
     6901 cgtcagcttt gatgaaacct taaaaccgtt tgtgcgtgat gtttccggca gccgcctgaa
     6961 agacctgccc aaaccgaaca aaagcgatga tgaaacgcgg gcgaacgatg cggttaaccg
     7021 ctacaaattg ctgaaaaaag atgcgcgtac catcgccgcc cagcaggtag caaggctgga
     7081 atccgccatg tgcctgcgcc gccgctggtc gctggaaaac ttccagctct tcctggttga
     7141 gcatccgctg gttcgtcact taacccgccg tctgatttgg ggcgtttata gcgccgaaaa
     7201 ccagctactg gcttgctttc gcgtagcaga agataacagc tacagcaccg ctgacgatga
     7261 tcttttcacc ctgccggaag gcgatatctc tatcggcact cctcacgttc tggaaatatc
     7321 accaacggat gctgccgcct ttggtcagct ttttgccgac tacgaactgc taccaccgtt
     7381 ccgccagctc gaccgtaaca gctacgccct gacagaagcc gagcgcaatg ccagtgaact
     7441 gacccgctgg gcaggcagaa aatgcccgag cggtcgggtc atgggactgg cgaataaagg
     7501 ttgggtgcgt ggtgaaccgc aggatggtgg ctggatcggc tggatgatca aacctctggg
     7561 ccgctggtcg ttaatcatgg aaatcgatga aggctttgca gttggtatgt cgccagccga
     7621 acttagcgcc gagcaactct taagcaagct gtggctatgg gaaggcaaag cagaaagcta
     7681 tggctggggg agtaattcaa cacaggaagc gcagttctcc gtactcgatg ccatcaccgc
     7741 cagcgagctg attaacgata ttgaagccct gtttgaataa ggaaagagca tggacaagga
     7801 attaccgtgg ctggcggata acgcccaact ggaactgaaa tataaaaaag gcaaaacacc
     7861 actcagccat cgcaattggc cgggcgaacc agtgcctgtt atcactgaaa gcatcattca
     7921 gacactgggt gatgaattgc tacaaaaagc tgagaagaaa aaaaacattg tctggcgtta
     7981 tgagaatttt tcactggagt ggcagtccgc cattacgcag gccatcaact tgatcggcga
     8041 acacaaaccc tcaatcccgg cccggacaat ggcggcgcta gtctgtatcg cgcaaaatga
     8101 cagccaacag ttgctcgacg aaatcgtcca acaagaggga ctggaatatg cgactgaggt
     8161 ggtgattgca cgccagttta ttacacgatg ttatgagagt gatcctctgc tagtgacatt
     8221 gcagtatcag gacgaggatt atggctatgg ttatcgctca gaaacctata acgaattcga
     8281 tctccgactg cgtaagcatc tctctctggc agaggaaagc agctggcagc gttgcgccga
     8341 caaactcatt gccgcactgc caggaatacc caaaattcgc cgtcctttta ttgcactact
     8401 cctcccggaa aaacctgaaa tagccaatga actcgccagt cttgaaagct cccggtcaag
     8461 tctccattca aaggagtggt taaaggtcat tgctactgat aatacggcgg taaaaaaact
     8521 cgaacgatgc tggggcctgg acgtatttag cgatcgagaa gccagctaca tgtcgcatga
     8581 aaaccacttc ggctacgcgg cctgcgccgc ccttttgcgc gaacaaggac tggcagccgt
     8641 tccgcgcctc gcgatatatg cccataaaga agattgcggc agtctgctgg tacaaattaa
     8701 ccatccgcaa gtcatccgca ccttgctgtt agttgctgat aaaaacaaac ccagcctgca
     8761 acgtgtggct aaatacagta aaaacttccc ccatgcgaca ctcgccgcac tggcagaact
     8821 gctggcgtta aaagaaccac cagcccgccc aggttatcca atcatcgaag acaaaaagct
     8881 gcctgcacag caaaaagcac gcgatgaata ctggcgtacg ctgttacaaa cgctgatagc
     8941 atcgcagcca caactagcag aaagggtgat gccgtggtta agtactcaag ccagggcagt
     9001 gctgaatagt tatttatcgg caccgccaaa accggttatt gatagcaccg ataacagcag
     9061 tctgcctgaa atgctcgttt caccaccgtg gcgtagtaag aaaaaaatga cagctccacg
     9121 tcttgatttg gcaccgctcg aattaactcc gcaaatttac tggcaaccag gcgaacaaga
     9181 gaggcttgcc gccactgagt ctgcccgtta tttcagcacg gaatctcttg cggaacgcat
     9241 ggaacaaaaa agtggacgag ttgtattaca ggaactgggt tttggggatg atgtatggct
     9301 gtttctgaat tatatactcc ccggaaaact ggatgctgca cgcaattcac tcattgttca
     9361 gtggcattac taccaggggc gggttgaaga gatcctgaat ggctggaact ccccgcaagc
     9421 acaattagca gaacaggcgc tccgcagcgg tcacatagaa gcgttaatta acatatggga
     9481 aaatgacaac ttctcacgtt atcgtccgga aaagagtgtc tggaacctgt atttattggc
     9541 acagttgccg cgtgagatgg ctttgacctt ctggctgcgt atcattgaga aaaagcatct
     9601 gttcgcgggt gaggactatt ttctcagtat cctcggattg gatgcgctac caggtctgct
     9661 gttggctttt tcacatcgtc caaaagaaac atttccgtta attttaaatt ttggcgcaac
     9721 agaactggcg ctgcctgttg cccgcgtctg gcgacgtttc gcggcgcagc gtgatctggc
     9781 tcgccagtgg attttacaat ggccggaaca tacggctagt gcacttatcc ctcttgtctt
     9841 taccaaaccc agcgataata gcgaagccgc attacttgcc ctgcgtttac tgtacgaaca
     9901 gggacatggc gaattgctac aaaccgtggc aaaccgctgg cagcgtacag atgtatggtc
     9961 tgccctggag cagttgctta aacagggtcc aatggacatt tacccggcac gcattccaaa
    10021 agcccctgat ttctggcatc cggcaatgtg gtccaggcct cgacttatca ctaataatca
    10081 gcctgttacc ggtgacgctc tggaaattat cggcgaaatg ctgcgcttta cccagggggg
    10141 acgtttttat agcgggctgg aacaactgaa aacgttctgc cagccacaaa cgctggcagc
    10201 ttttgcctgg gatctcttca ctgcgtggca acaagctggt gcccccgcaa aagacaactg
    10261 ggcatttctg gcgttaagtc tctttggtga cgaaagcacg gcacgggatc tgacgacaca
    10321 gatcctcgcc tggccacaag aaggcaaatc tgcccgtgct gtcagcggcc tgaacatcct
    10381 taccctgatg aataatgata tggcgctgat acagctgcat catatatcgc aacgggctaa
    10441 atcccgcccc ttacgtgata acgcggcgga atttcttcag gtggtcgcag aaaatcgcgg
    10501 gctaagccag gaagagctag cggacagatt agtcccaacc ctgggccttg atgatccgca
    10561 ggcgttgagt tttgattttg gtccccggca gtttaccgtt cgcttcgatg aaaacctcaa
    10621 cccggttatc tttgatcagc aaaacgttcg ccagaaaagc gttccccggt tgcgcgccga
    10681 tgacgatcaa ctgaaagcgc ccgaggcact ggcccgacta aaagggctaa aaaaagatgc
    10741 tactcaggtg agcaaaaacc tgctcccgcg tcttgaagct gccctacgta ccacccgacg
    10801 ctggtcgctg gcagattttc atactctgtt tgttaatcat ccctttaccc gcctggttac
    10861 ccagcgatta atatggggcg tgtatccggc aaatgaaccg cgtcgtttac tcaacgcctt
    10921 tcgtgtggcc gcagaggggg agttctgcaa tgcgcaggat gagccaattg acctgcctgc
    10981 ggatgctctg attggcattg cccacccgtt agaaatgaca gcagaaatgc gcagtgaatt
    11041 tgcccagctt tttgccgatt acgaaattat accgccactt cgccagttga cacggcgcac
    11101 ggtgctgctc acgcctgacg agtcagccag taatagtttg aatcgctggg aaggtaaatc
    11161 tgctaccgtt gggcaactta tgggaatgcg atacaaaggc tgggagtcag gctatgagga
    11221 cgcatttgtc tatgacctgg gtgagtaccg gctggtcctt aagttttcac ccggttttaa
    11281 ccactacaat gttgatagca aagcgctaat gagcttccgt tctcttcgag tgtacagtga
    11341 caataaatcc gtcacttttg ccgaacttga tgtgtttgat ttgagtgagg cgttaagcgc
    11401 acctgacgtc attttccatt aaaacacagc gggcagtgat gcaactgccc gttatcaaca
    11461 cgacttacca gcggggaaag cgatgatcgt gcaaaaagag ctggttgcta tttacgatta
    11521 tgaggtccct gtacctgaag atccgttttc cttcagactt gagatccata aatgctctga
    11581 attatttaca ggttccgtct atcgactgga gcgattccgg ctacgtccaa catttcatca
    11641 acgtgatcga gaagatgctg acccgctaat aaatgatgcg ttgatttata taagagatga
    11701 gtgtattgat gagcggaaat tacgaggtga atcacctgaa actgtaatag caatt
//
LOCUS       DAPGWB010000140        11575 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.142, whole genome shotgun sequence.
ACCESSION   DAPGWB010000140 DAPGWB010000000
VERSION     DAPGWB010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11575
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.142"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..442
                     /locus_tag="RHX79_003636"
     CDS             <1..442
                     /locus_tag="RHX79_003636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HDV2198757.1"
                     /translation="LNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSY
                     LTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMI
                     DWQAKNTYLLGDLDDLPLINKEEQPDKGFLARISRGIMPSLPFL"
     gene            complement(498..3353)
                     /gene="valS"
                     /locus_tag="RHX79_003637"
     CDS             complement(498..3353)
                     /gene="valS"
                     /locus_tag="RHX79_003637"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDV2198758.1"
                     /translation="MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNV
                     TGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTR
                     HDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRL
                     YKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLV
                     VATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCV
                     KITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQK
                     LERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKP
                     AVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRN
                     EDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSG
                     FDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPL
                     DMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALAST
                     GRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFN
                     QTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLV
                     TVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTE
                     WLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVL
                     PADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEG
                     FVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL"
     gene            complement(3353..3796)
                     /gene="holC"
                     /locus_tag="RHX79_003638"
     CDS             complement(3353..3796)
                     /gene="holC"
                     /locus_tag="RHX79_003638"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004098129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HDV2198759.1"
                     /translation="MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACE
                     DEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTS
                     FADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK"
     gene            complement(3930..5441)
                     /gene="pepA"
                     /locus_tag="RHX79_003639"
     CDS             complement(3930..5441)
                     /gene="pepA"
                     /locus_tag="RHX79_003639"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDV2198760.1"
                     /translation="MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYIS
                     ALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLND
                     TGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFN
                     VPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNV
                     ITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDS
                     GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRP
                     GDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHI
                     TGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITA
                     GCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE"
     gene            5708..6808
                     /gene="lptF"
                     /locus_tag="RHX79_003640"
     CDS             5708..6808
                     /gene="lptF"
                     /locus_tag="RHX79_003640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HDV2198761.1"
                     /translation="MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIP
                     ANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAA
                     MILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF
                     IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTAL
                     LRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTV
                     FMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV
                     NLIYLALAIVLNLWDTVPVRRLRASFSRKGAV"
     gene            6808..7890
                     /gene="lptG"
                     /locus_tag="RHX79_003641"
     CDS             6808..7890
                     /gene="lptG"
                     /locus_tag="RHX79_003641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313266.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HDV2198762.1"
                     /translation="MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ
                     GSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQV
                     ALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNF
                     VYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPK
                     QITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMW
                     SKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYG
                     IPPIIGALLPSASFFLISLWLLMRKS"
     gene            complement(8009..9511)
                     /locus_tag="RHX79_003642"
     CDS             complement(8009..9511)
                     /locus_tag="RHX79_003642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HDV2198763.1"
                     /translation="MSDPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLA
                     ESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLARLKNIGVNDWQPHANPVVVWDIFG
                     EKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQY
                     IGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDTNGKG
                     VINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAP
                     QVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAV
                     KAAAQTMRANSVFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTE
                     DERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASTEQQNNPPAKGKEVAVDDGILG
                     GLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGVLGSLLGGRRR"
     gene            complement(9594..9803)
                     /locus_tag="RHX79_003643"
     CDS             complement(9594..9803)
                     /locus_tag="RHX79_003643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001514390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase"
                     /protein_id="HDV2198764.1"
                     /translation="MLAGHKAIGRVAALGSAAQNKGLQVGQRTAHGSGYCDTFIRCNQ
                     LNFRQGAAPTIMNRGGFAGSLLPSL"
     gene            10038..10122
                     /locus_tag="RHX79_003644"
     tRNA            10038..10122
                     /locus_tag="RHX79_003644"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10072..10074,aa:Leu,seq:caa)
     gene            10285..11550
                     /locus_tag="RHX79_003645"
     CDS             10285..11550
                     /locus_tag="RHX79_003645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000772669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HDV2198765.1"
                     /translation="MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRR
                     PSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAENSGAYTFET
                     IAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKH
                     DVAQRLQQRVTAVMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARL
                     AAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYR
                     GMKMKEEHIVPLSLQAMALLEQLKQMSGDKELLFPGDHDPTKVMSENTVNSALRAMGY
                     DTKTDVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRL
                     MVQWWADYLDEIKIIYITPYDFAKMNNRN"
BASE COUNT         2616 a         3071 c         3015 g         2873 t
ORIGIN      
        1 attaaatgcg tatgatagtt ctgtgtatgc aaatgatgat attgagaatt tacagcaatt
       61 tatggaaatg caacgtaaaa tgataatcgc gcagttaatc tattattttg ggattgctgt
      121 tagcaccagt tatttaacgg tgtcgttgcg aaatcatttt atgagcaacc tgtcactgaa
      181 tgatgggcgt attcgttttc gctcaacttt aacgtaccac ggtatgcttt atcgcatgtg
      241 tgcgttggtg gtgatatccg ggattacggg cggtctggct tatccactgc tgaaaatatg
      301 gatgattgac tggcaggcaa aaaatacgta tttgctgggc gatttggatg accttccttt
      361 aatcaataaa gaagaacaac cagataaagg cttcttagcc aggatttcac ggggaattat
      421 gccttcttta ccatttctgt aagagataaa aaaggccgga gcatgctccg gccttcgttt
      481 tcattactgt gttttgatta cagcgcggcg ataacagcct gctgttcaat cagcttcgct
      541 ttcgcttctg catagccttc cagcttttca cgctctttcg cgatgaccgc ttccggtgcg
      601 cgggcgacaa agccttcatt cgccagcttg ttctcgatac ggctgatttc accttcaatc
      661 ttcgccactt ctttcgccag acgcgccagc tcatcttctt tgttgatgag gccagccatc
      721 gggatcagca gctctgcacc gtcgatgatc ttagtaacgg aaaccggacc tttgtcatcg
      781 gcaggcagca cggtgatact ttccagacgc gccagcgttt gcaggaagcc acggttttca
      841 tttacgcgac gttctgcatc cgcgctgcaa ccacgcagta gcagctccag cggtttgccc
      901 ggcgcgatgt tcatttctgc acggatgtta cgtaccgcaa cgatcgcctg cttcagccac
      961 tcggtgtcgg ccagtgcggc ttcatcaacc tgagatgcat cgtactgcgg gaacggctgc
     1021 agcatgatgg tgtcggcagt gataccgcaa agtactttca cacgctgcca gatggtttcg
     1081 gtgatgaacg gaatgatcgg atgcgcgagg cgcagcagac cttccagtac agtcaccagc
     1141 gtatggcgag taccgcgcag ttctgcttcg gtgccaccgt tcattaccgg cttggtcagc
     1201 tcgagatacc agtcacagaa ctggttccag gtgaactcat acagaatgcc tgcggcgata
     1261 tcgaagcgga agctgtccag cgcttcgcgg tacgctttga tggtctggtt gaactccgcc
     1321 agaatccagc ggtccgccag cgacagcgtc atttcgccgc cgttgaagcc gcaatcctga
     1381 ccttctgtgt tcatcagcac aaagcggctg gcgttccaca gcttgttaca gaagttacgg
     1441 taaccttcca ggcgcttcat atcccagttg atgtcacgac cggtagacgc cagtgccgcc
     1501 agggtgaagc gcagcgcgtc agtaccgtgc ggttcaatac cgttcgggaa ctgcttctcg
     1561 gtgcgcttac ggattttgtc cgccagctgt ggctgcatca tattgccggt gcgtttttcc
     1621 agcagttctg gcagcgaaat accgtcaacc atatccagtg ggtcaataac gttacccttg
     1681 gatttggaca tcttctggcc ttcgtcgtca cgaatcaggc cggtcatgta aacggtgtgg
     1741 aacggcacct gcggtttgcc attttcatct ttgatgaagt gcatggtcat catgatcatg
     1801 cgggcaatcc agaagaagat gatgtcgaag ccggatacca tcacgctggt tgggtggaac
     1861 tgacgcaggg cgtcggtgtt ttccggccag cctagggtag agaaggtcca cagtgcagaa
     1921 gagaaccagg tgtcgagaac gtcttcgtcc tgacgcaggg caacgtcggc accgaggtta
     1981 ttttctttac gcacttcgtc ttcgttgcgg ccaacataaa cgttacccgc ttcgtcatac
     2041 catgccggga tacggtgacc ccaccacaac tgacgagaga tacaccagtc ctgaatatcg
     2101 cgcatccagg agaagtacat gttttcgtac tgcttcggta cgaactgaat gtcgccgttc
     2161 tcaaccgctt caactgccgg tttcgccagg acatcggcac gcacgtacca ctggtcggtc
     2221 agcattggtt cgatgaccac gccgccacgg tcgccgtaag gaacggtcag gtcatgtggt
     2281 ttaatttctt ccagcaggcc gagtgcgtca accgcagcaa cgaccgcttt acgtgcagca
     2341 aaacgctcca gtttctggaa ttctgccggg atctcgctgg aataaacgtc agattcgtta
     2401 cctttggtat cgaacacctg ggcactttca cggatatcgc cgtcaaaggt caggatgttg
     2461 atcatcggca gggcgtgacg tttaccgact tcatagtcgt taaagtcgtg cgccggggtg
     2521 atcttcacgc agccggtgcc tttttccatg tcggcgtgtt cgtcgccaac gatcggaata
     2581 cgacggttaa ccagcggcag aatgacatat ttgccaatca gatctttgta acgcggatct
     2641 tccgggttaa cggctacgcc agtatcgccc agcagggttt ccggacgggt agtcgcaacc
     2701 accagataat ctttaccgtc tgcggttttc gcgccgtcag ccagcggata gcggatgtgc
     2761 cacatcgaac ctttcgattc gcggttttcc acttccaggt cagagatagc ggtgcgcagt
     2821 ttcgggtccc agtttaccag gcgtttgcca cggtaaatca ggtcttcttt atacagacga
     2881 acgaaaactt ctttcaccgc attggacagg ccttcgtcca tggtgaagcg ttcacgctcc
     2941 cagtccacgg agttgccgag acggcgcatc tgacgggtaa tggtgccgcc agattccgct
     3001 ttccattccc agattttgtc gatgaaagct tcgcggccgt agtcgtgacg ggttttacct
     3061 tcttctgcgg caatcttgcg ctcaacgacc atctgggtag cgatcccggc gtggtcagta
     3121 ccgacctgcc acagggtgtt tttgccctgc atgcgctgat agcggatcat ggtatccatg
     3181 atggtttgct ggaaggcgtg acccatatgc aaactgccgg tgacgttcgg cggcgggatc
     3241 atgatgcaga aactttcctg gctttcatcg ccattaggct taaagtagcc ctgcttttcc
     3301 cagtgctcgt aaagcggctg ttcgatatct tgtgggttat atgtcttttc cattatttcc
     3361 aggttgccgt attcaggttg aaaccagcca cgcggtaggc tttatagcgt tcgcgcgcca
     3421 gttgtttcag agaatcttca taaggaacga agtctaccac ttctgtgaaa gcggtggcaa
     3481 aatctgcaaa gcttgttcgc agactaatca atatatcgcg cgggctgctg ctgcgttttt
     3541 gcggccaggc gatctccacc ggcgcaccgc cgcgcggtcc ttctcccgct aaattatgcg
     3601 gaacaaagct ttctgccgga cgcgcccaca gggcttcatc cagccggtaa gcctgctttt
     3661 catcttcaca ggcgatgagt acgcgcttac cactgcgcca acgttctgcg gcaatttcac
     3721 acaccagttg ctcaacggcg cttaagccat cgacggtggt gtcattgtcc agaaggtaga
     3781 acgtcgcgtt tttcataaat ggggcttctt gtggtggatt taaatattgc tgcattcctc
     3841 accctaaaag atgagcaatg aatttctatt gcgctcgatc ggttccctct cccttaggga
     3901 gagggttagg gtgagggtaa aacgcaaact tactcttcgc cgttaaaccc ggcgcggttt
     3961 aacaggaact gtgccagcaa cgctaccgga cgaccggttg cgcctttcgc tttaccagaa
     4021 cgccaggcgg taccggcgat atccaggtgc gcccagttgt acttacgggt aaagcgtgac
     4081 aggaagcaac ctgcggtaat cgccccacca ggacgaccgc caatgttcgc catatcggca
     4141 aaattggact ccagttgttc ctgatactcg tcacccagcg gtaagcgcca tgcgcggtca
     4201 ccggattgtt cagacgcggc aatcagttca tgggccagcg gattgtggtt cgccatcaga
     4261 ccagtaatgt gatgacccag cgcgatcacg caggcaccgg tcagcgtcgc cacgtcaatc
     4321 accgcttccg gctcaaaacg ctcaacgtaa gttaacacgt cgcacagtac caggcggcct
     4381 tcagcgtcgg tgttgagcac ttcaacggtt tgaccagaca tggtggttaa cacatcgccc
     4441 ggacgatagg cgcgaccgcc tggcatgttt tcacaacctg ccagcacgcc gataacatta
     4501 atcggcagtt gtagctccgc gaccatacgc atcacgccgt aaaccgccgc cgcgccgcac
     4561 atatcgtact tcatctcatc catgccttct gaaggcttga tcgagatacc gccggagtcg
     4621 aaggttaaac ctttacccac cagcacgatt gggcgtgcat cttccgacgc gttgcctttg
     4681 tactcaatca ccgacatcag cgattcgttt tgcgaaccct gaccgaccgc cagataagag
     4741 tgcatcccca gctctttcat ctgctgttcg ccgataacgc gggtaatgac attcttgctg
     4801 tagctgtcag ccagctggcg cgcttgtgaa gcgaggtaag cggcgttaca gatattcggc
     4861 ggcatattgc cgagatcttt tgctgcttta atcccggcgg caatcgccag accgtgctgg
     4921 atcgcgcgct caccgctggt cagttcacgg cgggtcggca cgttgaacac catcttacgc
     4981 agcggacgac gcggttcgct cttgttcgtt ttcagctgat cgaaactgta gagcgtctct
     5041 tttgccgtct cgacagcctg acgcactttc cagtagttgt tacggccttt aacgtgcagt
     5101 tcagtcagaa agcagaccgc ttccattgag ccagtatcat tcagcgtatt aatggttttc
     5161 tgaataacct gcttgtactg acgctcatcc agctcacgtt ctttgccgca accaataagg
     5221 agaattcgct cggaaagtac attcggaaca tggtgcagca acaatgtctg ccccggtttt
     5281 ccttccagtt cgccccgacg tagcagggcg ctgatgtacc catcgctgat tttatcgagc
     5341 tgttctgcaa tcggagaaag gcgacgtggt tcgaagacgc ccacgacgat gcaggcactc
     5401 cgctgtttct ccgggctacc gctttttaca ctaaactcca tgcactacgc tcctgaatct
     5461 taaagacaac ggcggtggct acagatagaa ttgcaagctt tcgtaactca tgtccgctgt
     5521 tgcgatgact tcgtgttaat cttaacgtta ttacggcatt ggcacgtcag aacaaaatct
     5581 gagaggtgaa tccgttgagt ataattatct tagcgacgat ttcgacgact caagagaata
     5641 aatgacgttt aagccatgaa acaagctaaa atcctgcaaa agacgagttt ttacgggcgt
     5701 atttaaagtg ataatcataa gatatctggt gcgggagacg ctcaaaagcc agctggcgat
     5761 actcttcatc ttgcttttga tcttcttctg tcaaaagtta gtgaggatcc tcggcgcagc
     5821 ggttgacggc gatattccgg cgaatctggt gctctccctt ctcgggttgg gcgtgccgga
     5881 aatggcgcag cttatcctgc cattaagcct gttcctcggg ctgctgatga cgctgggcaa
     5941 actgtatacc gaaagtgaaa ttacggtaat gcatgcctgc ggcctgagca aagcggttct
     6001 ggtgaaagcg gcaatgatcc ttgcggtatt cacggcaatc gtcgcggcgg ttaacgtgat
     6061 gtgggcggga ccgtggtcat cgcgtcatca ggatgaagtg ttagcagaag cgaaagcgaa
     6121 ccctggcatg gcggcgctgg cgcaagggca attccagcaa gcgactaatg gcagttcggt
     6181 gctgttcatc gaaagcgttg acggcagcga tttcaaagat gtgttcctcg cgcaaattcg
     6241 accaaaaggt aatgcacgtc cttctgtggt ggtggccgat tccggacatt taacccagct
     6301 gcgcgacggc tcccaggtcg tcactctcaa ccagggaacg cgcttcgaag gcactgcact
     6361 gttacgtgat ttccgcatta cggatttcca ggattatcag gcgatcattg gtcaccaggc
     6421 ggtggcgctc gacccgaacg ataccgacca gatggacatg cgtacattgt ggaacactga
     6481 caccgatcgt gcccgcgcag aactgaactg gcgtatcacg ttggtattca ccgtgtttat
     6541 gatggcactt atggtcgtac cgctgagcgt ggttaaccca cgtcagggac gcgtactgtc
     6601 gatgctgcca gccatgctgc tgtatctact tttcttcctg atccagacct ccctgaaatc
     6661 gaacggtggt aaaggtaagc tggacccgac gctgtggatg tggaccgtta acctgattta
     6721 tctggctttg gcgattgttc tcaacctttg ggacaccgtg ccggtccgcc gcctgcgcgc
     6781 cagtttttcg cgtaaaggag cggtgtgatg caaccttttg gcgtacttga ccgctatatc
     6841 ggtaaaacta ttttcaccac catcatgatg acgctgttca tgctggtgtc gctgtcgggc
     6901 attatcaagt ttgtcgatca gctgaaaaaa gccgggcagg ggagttacga cgcgttaggc
     6961 gcaggaatgt ataccttgct gagcgtgccg aaagatgtgc aaatcttctt cccgatggcg
     7021 gctctgcttg gggcgttgct tggtcttggg atgctggcgc agcgcagcga actggtggtg
     7081 atgcaggctt ctggttttac ccgtatgcag gtggcgctgt cggtgatgaa aaccgccatt
     7141 ccgctggtct tgctgacgat ggcgattggc gaatgggtcg cgccgcaggg cgaacagatg
     7201 gcgcgtaact accgtgcgca ggcgatgtac ggcggctcgt tgctctctac tcagcaaggc
     7261 ttatgggcga aagatggcaa caacttcgtc tacattgagc gggttaaagg tgacgaagag
     7321 ttaggtggca tcagtattta tgcctttaac gagaatcgtc gtctgcaatc cgtacgctat
     7381 gccgctaccg cgaagtttga cccggaacat aaagtctggc gtctgtcgca ggttgatgaa
     7441 tctgatctga ccaatccgaa acagattacc ggttcgcaga cggtgagcgg cacctggaaa
     7501 accaacctca cgccagacaa actgggcgtg gtggcgctgg acccggatgc actctccatc
     7561 agtggtttgc acaactatgt gaagtatctg aagtcgagcg gtcaggatgc cggacgttat
     7621 cagctcaaca tgtggagcaa aatcttccag ccgctatccg tggcggtgat gatgctgatg
     7681 gcgctgtcgt ttatctttgg cccactgcgt agcgtaccga tgggcgtgcg tgtggtcacc
     7741 ggtatcagct tcggttttgt cttctacgta ctggaccaga tcttcggccc gctgacgttg
     7801 gtttacggca tcccgccgat tatcggcgca ctgttgccaa gcgccagctt cttcttaatc
     7861 agcctgtggc tgttaatgag aaaatcgtaa ccaagcaagg gagcgaaagc tccctttcac
     7921 attgttgata aagtcaaata cgagttcgat cggtcccctc gcccctttgg ggagagggtt
     7981 agggtgaggg gcacagaccg cacctgactt accttcttct cccccccagc aaactcccca
     8041 gcacaccacg cacaatctga ttcgtcacct ggcgggcggc gcttttcgcc attgtttgca
     8101 ccacaccatc tttcttcccg ccgcgtggtc cggtagtgcc aaacaaaata tccttcaatc
     8161 caccgagaat accgtcatcc accgccacct ctttcccttt cgcgggagga ttattttgct
     8221 gctcggtact ggcctgaaag cctttttgca acatctcata ggcggattcc cggtccacgt
     8281 catcctcgta cttgccatac accggggagt gattaatcag gccgttacgc tcatcttccg
     8341 tcaccggccc cattcgcgaa cagggggcaa tcaccatcgc ccgttccacc actgaaggac
     8401 ttcctttcgc atcgagaaac gagattaacg cctcgccggt ccccagttcc tggattgcct
     8461 tttcggtatc aaacaccgaa ttggcccgca tggtttgcgc cgcagctttt actgctttct
     8521 gatctttggg cgtaaaagcc cgcaaagcgt gttgaacgcg attacctagc tgcccgagca
     8581 cattatccgg aatatcagac gggttttgcg aaacgaacca gacgcctacg ccttttgagc
     8641 gaataagccg tatcacctgc tcaatcttat ccagcagtac ctgcggtgca tcgttaaaca
     8701 gcagatgtgc ctcgtcgaag aaaaacacca gttttggttt ctccagatcg cccgcttccg
     8761 gcaattgttc atacaactct gaaagcatcc acagcaggct ggcggcgtac agtttcggca
     8821 tctgataaag cttctcggcg ctgaggatat tgataacgcc tttaccgttg gtatcggtgc
     8881 gcatccagtc tttgatatcc agcatcggct cgccaaagaa gtgtgctgcg ccttgctgtt
     8941 ccagcgacaa cagtccgcgc tggatggcac caaccgatgc gctactgata ttaccgtact
     9001 gattctggaa agatttggcg ttatcgccga tgtactgggt aatcgcccgc agatctttaa
     9061 agtcgagcag caacaatccc tgatcgtcag caatacggaa gatgatattc agcacgccag
     9121 attgcacatc gttgagattc aacagccgcg ccagcaacag cggccccaga tccgaaaccg
     9181 tcgcccgcac cggatggcct ttctcgccaa agatatccca caccaccacc ggattagcat
     9241 gcggttgcca gtcattgacg ccgatatttt taagccttgc gagtagtttt tccgatgccg
     9301 ttcctgcctg cgcgatgccg gtcagatcgc ctttcacatc ggccataaac accggaacac
     9361 cgatttccga tagagactcc gccagttttt gcagcgtgac agttttaccc gtccccgttg
     9421 cgccagtaat cagcccgtga cggttagcca ttcccggcag taaaaacagt tctgtgtccg
     9481 gcgtgcgggc aattaacagg gggtcgctca tgagatatcc tccagtttcc tgcctggagt
     9541 ataggcacgg ttaaaaagtt ttcaccacta aattcagccg attgcgagat atcttaaagg
     9601 cttggcagaa gcgatccggc aaagcctcct cgattcataa ttgtcggcgc cgcaccttgc
     9661 ctgaagttga gctgattaca gcgaataaag gtgtcacaat agccactgcc atgcgccgtc
     9721 ctttgaccta cctgcaaacc tttattctgc gcggcgctac ccaaggcagc cacgcgacca
     9781 atcgccttat gtccggcaag caacggatat tgtgaaatcc ctattcgtta tcgatcatcg
     9841 acatgctttt gtcgctctct ggtgttgccc gggaagtgta gagcatggct gggtggggcc
     9901 tggagtgtga caaaggttac atatcgctga aggcaatgct gaaattttca gcacttagcg
     9961 aggcaggcac aagctggcgc ttgcatggtg gcgcgtgaca ggtataattc acaacgtttt
    10021 ccgcatacct cttcagtgcc gaagtggcga aatcggtaga cgcagttgat tcaaaatcaa
    10081 ccgtagaaat acgtgccggt tcgagtccgg ccttcggcac cattagtact tcccagacca
    10141 tccgagaaag tccatcaaac cctttaaaat caacatgtgc agcgatttta cgtcctgagt
    10201 tgtccgaggt agtccgttga aatccggatg tcattggggg cataattggg ggcatcttaa
    10261 cttcgataag aaatgtgccc ccagatgaag ctcaacgcca gacaggtcga gaccgcaaag
    10321 ccaaaagaca aaacctacaa aatggccgat ggcggcggtt tgtatcttga ggtttcggcc
    10381 aagggttcta aatactggcg catgaaatac agacgcccct ctgacaaaaa agaggatcgc
    10441 cttgcctttg gtgtttggcc tacggtgacg cttgctcagg caagagcaaa gcgtgacgag
    10501 gctaaaaagc tcttagtaca gggcattgac ccaaaagccg aacagaaaga agctcaggct
    10561 gagaattcgg gggcatacac tttcgaaaca attgctcgtg aatggcatgc cagtaacaag
    10621 cgctggagtg aagaccatcg atcacgcgtt ctgcgatatc ttgagcttta tatcttccct
    10681 catatcggtt cgtccgacat tcggcagctt aaaaccagcc acctgttagc cccgattaaa
    10741 aaagttgatg ccagtggtaa gcatgacgtt gcgcagcgtc ttcaacaacg tgtcacggct
    10801 gtaatgcgtt atgccgttca gaacgattac atcgactcta atccggccag tgatatggcc
    10861 ggtgcgctat cgacaaccaa agcgcgacat taccccgctt taccctcaag tcgattccct
    10921 gaatttcttg cacgtcttgc tgcatatcgt ggccgtgtaa tgacacggat cgcggttgag
    10981 ctttccttac taacttttgt acgttccagc gaattacgtt tcgcgcgttg ggatgagttc
    11041 gacttcgata agtctctctg gcgtatacct gcaaaacgag aagaaattaa aggcgtgcgg
    11101 tactcatacc gtggcatgaa gatgaaagag gagcatatcg ttccgcttag tctgcaggcg
    11161 atggctttgt tagagcagct taagcagatg agtggtgata aagagctgct ttttccgggc
    11221 gatcatgacc caaccaaggt tatgagtgaa aacacggtaa atagcgcatt acgtgcgatg
    11281 ggctatgaca ctaaaacaga tgtctgcgga catgggttta ggacgatggc gcgtggtgcg
    11341 ttgggagagt caggattatg gagcgatgat gcgatagagc gccagctaag ccactcggaa
    11401 cgtaacaatg tacgtgcagc ttatattcat acttctgaac atttggatga gcgccggttg
    11461 atggtccagt ggtgggctga ctatcttgat gagataaaaa tcatttacat aacaccatat
    11521 gatttcgcta aaatgaataa tcgcaattaa tctttttaag aaagggctga agaat
//
LOCUS       DAPGWB010000141        11379 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.143, whole genome shotgun sequence.
ACCESSION   DAPGWB010000141 DAPGWB010000000
VERSION     DAPGWB010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11379
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.143"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            154..513
                     /locus_tag="RHX79_003646"
     CDS             154..513
                     /locus_tag="RHX79_003646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001331208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1889 family protein"
                     /protein_id="HDV2198766.1"
                     /translation="MQIKVIYSLIDNMVNFKDKNMPAVIDKALDFIGAMDVSAPTPSS
                     MNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMESGERTVIK
                     NPEYFSKYMQEELKALV"
     gene            complement(633..812)
                     /locus_tag="RHX79_003647"
     CDS             complement(633..812)
                     /locus_tag="RHX79_003647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HDV2198767.1"
                     /translation="MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRAN
                     HSGERIVARFEDEDE"
     gene            886..2247
                     /gene="pabB"
                     /locus_tag="RHX79_003648"
     CDS             886..2247
                     /gene="pabB"
                     /locus_tag="RHX79_003648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 1"
                     /protein_id="HDV2198768.1"
                     /translation="MKTLSPAVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYS
                     RFDIVVADPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPF
                     QGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDV
                     NARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRF
                     HATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGT
                     LPRLPDPQEDSKQAEKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPF
                     PAVHHLVSTITARLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCG
                     SIGYLSFCGNMDTSITIRTLTAINGQIYCSAGGGIVADSQEEAEYQETFDKVNKILRQ
                     LEK"
     gene            2251..2829
                     /locus_tag="RHX79_003649"
     CDS             2251..2829
                     /locus_tag="RHX79_003649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HDV2198769.1"
                     /translation="MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQP
                     GLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLP
                     PVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
                     HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP"
     gene            3013..4377
                     /gene="sdaA"
                     /locus_tag="RHX79_003650"
     CDS             3013..4377
                     /gene="sdaA"
                     /locus_tag="RHX79_003650"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDV2198770.1"
                     /translation="MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTR
                     VAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGR
                     HEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQD
                     AANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQA
                     CIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENA
                     AGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPC
                     IERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIK
                     VQCD"
     gene            4508..6106
                     /locus_tag="RHX79_003651"
     CDS             4508..6106
                     /locus_tag="RHX79_003651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDV2198771.1"
                     /translation="MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQ
                     RVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLV
                     QDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSN
                     AGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS
                     SQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLG
                     LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTR
                     YVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITE
                     RDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD
                     AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFP
                     KWLAGSQPPPARHNGHITPIMPLR"
     gene            complement(6110..7666)
                     /gene="yoaE"
                     /locus_tag="RHX79_003652"
     CDS             complement(6110..7666)
                     /gene="yoaE"
                     /locus_tag="RHX79_003652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family cation transport protein YoaE"
                     /protein_id="HDV2198772.1"
                     /translation="MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD
                     KARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKAT
                     TELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA
                     VVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI
                     GFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPMPI
                     PEGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLF
                     PVCRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRAR
                     GSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQ
                     QALDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIV
                     KEQPAHDEDE"
     gene            8129..9100
                     /gene="manX"
                     /locus_tag="RHX79_003653"
     CDS             8129..9100
                     /gene="manX"
                     /locus_tag="RHX79_003653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HDV2198773.1"
                     /translation="MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET
                     LIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETL
                     MARDDDPSFDELVALAVETGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPND
                     YMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTA
                     HVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQ
                     VNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISKIDK"
     gene            9163..9963
                     /gene="manY"
                     /locus_tag="RHX79_003654"
     CDS             9163..9963
                     /gene="manY"
                     /locus_tag="RHX79_003654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIC"
                     /protein_id="HDV2198774.1"
                     /translation="MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLG
                     DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPL
                     AAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVAL
                     SVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAA
                     FTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD"
     gene            9976..10827
                     /gene="manZ"
                     /locus_tag="RHX79_003655"
     CDS             9976..10827
                     /gene="manZ"
                     /locus_tag="RHX79_003655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020804907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HDV2198775.1"
                     /translation="MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCF
                     SMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDG
                     AINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLA
                     TRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSR
                     ITDQTGKEHVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGY
                     ACGLLGL"
     gene            10882..11340
                     /locus_tag="RHX79_003656"
     CDS             10882..11340
                     /locus_tag="RHX79_003656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HDV2198776.1"
                     /translation="MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGR
                     IDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFA
                     NVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ"
BASE COUNT         2791 a         2866 c         2864 g         2858 t
ORIGIN      
        1 tctttcttag ctgaataatc tggttatagc gtgaggactg accgttaaat ttctccatct
       61 tactggataa cacaccatga gctgctacct ttaaaacacc tgaatgtcaa caggttaact
      121 cgtgccatat cgttataatc cctttgatat tagatgcaaa ttaaggtcat atatagtctt
      181 atcgataaca tggttaattt taaggataag aatatgcctg ctgtaataga taaagccctg
      241 gatttcattg gtgccatgga tgtatcagcg ccaacaccaa gttcgatgaa tgaaagcacg
      301 gcgaagggaa tctttaaata tttaaaagaa ctgggagtac ccgcgagtgc cgctgatatt
      361 acggcgcgag ctgaccagga aggctggaac cctgggttca cggaaaaaat ggttggatgg
      421 gcaaaaaaaa tggagtctgg tgaacgcact gtaattaaaa atcctgaata cttttcaaaa
      481 tatatgcagg aagaactaaa agcactggtc tgagcttaat ttatatcagc ataaatgggt
      541 caggacgctt ttaatcacat ataaaaagcg tcctttttct cacaatcaaa taatcatcgg
      601 attctataac gaaatcgata cggattagtg tgttactcgt cttcatcctc aaaacgcgcc
      661 acgattcgct cgccggagtg gttggcacgc agctcttctg ccaccagcgc gattgcctgg
      721 ccgctgctca tcccttgtgc catcagttcc tggatccgct cgacagcttt ttgctgctgt
      781 tcatgggtga gtgaaggtaa acctgcaaac attgttaact cctgctaaat tgttggcgct
      841 aattatttca tgctacccgg cacatagcca gtagagtcag gactgatgaa gacgttatct
      901 cccgctgtga ttactttacc ctggcgtcag gacgccgctg aattttattt ctcccgctta
      961 agccacctgc cgtgggcgat gcttttacac tccggctatg ccgatcatcc gtatagccgc
     1021 tttgatattg tggtcgccga tccgatttgc actttaacca ctttcggtaa agaaaccgtt
     1081 gttagtgaaa gcgaaaaacg cacaacgacc actgatgacc cgctacaggt gctccagcag
     1141 gtgctggatc gcgcagacat tcgcccaacg cataacgaag atttgccatt tcagggcggc
     1201 gcactggggt tgtttggcta cgatctgggc cgccgttttg agtcactgcc agaaattgcg
     1261 gaacaagata tcgttctgcc ggatatggca gtgggtatct acgattgggc gctcattgtc
     1321 gaccaccagc gtcatacagt ttctttgctg agtcataatg atgtcaatgc ccgtcgggcc
     1381 tggctggaaa gccagcaatt ctcgccgcag gaagatttca cgctcacttc cgactggcaa
     1441 tccaatatga cccgcgagca gtacggcgaa aaatttcgcc aggtacagga atatctgcac
     1501 agcggtgatt gctatcaggt gaatctcgcc cagcgttttc atgcgaccta ttctggcgat
     1561 gaatggcagg cattccttca gcttaatcag gccaaccgcg cgccatttag cgctttttta
     1621 cgtcttgaac agggtgcaat tttaagcctt tcgccagagc ggtttattct ttgtgataat
     1681 agtgaaatcc agacccgccc gattaaaggc acgctaccac gcctgcccga tcctcaggaa
     1741 gatagcaaac aagcagaaaa actggcgaac tcagcgaaag atcgtgccga aaatctgatg
     1801 attgtcgatt taatgcgtaa tgatatcggt cgtgttgccg tagccggttc ggtaaaagta
     1861 ccagagctct tcgtggtgga acccttccct gccgtgcatc atctggtcag cactataacg
     1921 gcgcgactac cagaacagtt acacgccagc gatctgctgc gcgcagcttt tcctggtggc
     1981 tcaataaccg gggctccgaa agtacgggct atggaaatta tcgacgaact ggaaccgcag
     2041 cgacgtaatg cctggtgcgg cagcattggc tatttgagct tttgcggcaa catggatacc
     2101 agcattacta tccgcacgct gactgccatt aacggacaaa tatactgctc tgcgggcggt
     2161 ggaattgtcg ccgatagcca ggaagaagcg gaatatcagg aaacttttga taaagttaat
     2221 aagatattac gccaactgga gaagtaagac gtggaatacc gtagcctgac gcttgatgat
     2281 tttttatctc gctttcaact tttgcgcccg caaattaacc gggaaaccct aaatcatcgt
     2341 caggctgccg tgttaatccc catcgtccgt cgaccgcaac cggggttgtt gctgactcag
     2401 cgttcaattc atctgcgtaa acacgctgga caagtggcat tccctggagg tgcagtcgat
     2461 gacacggacg catcagttat cgccgccgcg ctgcgcgaag ctgaagaaga ggtcgctata
     2521 ccgccttccg ccgttgaagt tatcggcgtg ctgccgcccg tcgatagcgt aactggctat
     2581 caggtaaccc cagtggtcgg cattatcccg cccgatctgc cgtatcgcgc cagtgaagat
     2641 gaagtctcgg cggtgtttga aatgccgctc gcccaggcat tacatctggg tcgttatcac
     2701 cctttagata tctaccgccg tggcgattca catcgggtat ggctgtcctg gtacgaacag
     2761 tattttgtat ggggaatgac cgcaggcata attcgtgagc tggcgctgca aattggtgtg
     2821 aaaccctgac tatacttatc tttacatcta caaaacacta cttgagacaa tcatcgcaat
     2881 attagttaaa tcgcggtttt tgattagttt aattcatgtg aatagttaag ccagtcgccg
     2941 cgttccctct tacactatgc gctgttatta gttcgttact ggaagtccag tcaccttgtc
     3001 aggagtatta tcgtgattag tctattcgac atgtttaagg tggggattgg tccctcatct
     3061 tcccataccg tagggcctat gaaggcgggt aaacagttcg tcgatgatct ggtcgaaaaa
     3121 ggcttactgg atagcgttac tcgcgttgcc gtggacgttt atggttcact gtcgctgacg
     3181 ggtaaaggcc accacaccga tatcgccatt attatgggtc ttgcaggtaa cgaacctgcc
     3241 accgtggata tcgacagtat tcccggtttt attcgcgacg tagaagagcg cgaacgtctg
     3301 ctgctggcac agggacggca tgaagtggat ttcccgcgcg acaacgggat gcgttttcat
     3361 aacggcaacc tgccgctgca tgaaaacggt atgcaaatcc acgcctataa cggcgatgaa
     3421 gtcgtctaca gcaaaactta ttattccatc ggcggcggtt ttatcgtcga tgaagaacac
     3481 tttggtcagg atgctgccaa cgaagtgagc gtgccgtatc cgttcaaatc tgccaccgaa
     3541 ctgctcgcgt actgtaatga aaccggctat tcgctgtctg gtctcgctat gcagaacgaa
     3601 ctggcgctgc acagcaagaa agagatcgac gagtatttcg cgcatgtctg gcaaaccatg
     3661 caggcatgta tcgatcgcgg gatgaacacc gaaggtgtac tgccaggccc gctgcgcgtg
     3721 ccacgtcgtg cgtctgccct gcgccggatg ttagtttcca gcgataaact gtctaacgat
     3781 ccgatgaatg tcattgactg ggtaaacatg tttgcgctgg cagttaacga agaaaacgcc
     3841 gccggtggtc gtgtggtaac tgcgccaacc aacggtgcct gcggtatcgt tccggcagtg
     3901 ctggcttact atgaccactt tattgaatcg gtcagcccgg acatctatac ccgttacttt
     3961 atggcagcgg gcgcgattgg tgcattgtat aaaatgaacg cctctatttc cggtgcggaa
     4021 gttggttgcc agggcgaagt gggtgttgcc tgttcaatgg ctgctgcggg tcttgcagaa
     4081 ctgctgggcg gtagcccgga acaggtttgc gtggcggcgg aaattggcat ggaacacaac
     4141 cttggtttaa cctgcgaccc ggttgcaggg caggttcagg tgccgtgcat tgagcgtaat
     4201 gccattgcct ctgtgaaggc gattaacgcc gcacggatgg ctctgcgccg caccagtgca
     4261 ccgcgcgtct cgctggataa ggtcatcgaa acgatgtacg aaaccggtaa ggacatgaac
     4321 gccaaatacc gcgaaacctc acgcggtggt ctggcaatca aagtccagtg tgactaatac
     4381 ttcttactcg cccatctgca acggatgggc gaatttatac ccgctttctc gtctgctgta
     4441 atattcccca ctacacttcc actgttgcgt caggcgtttg tcgccatacg cttacagggt
     4501 ggcccgcatg caaaaagcac aacggatcat taaaacctat cgccgtaatc gaatgattgt
     4561 ttgtacgatt tgcgcactcg ttacgctcgc ttcgaccctg agcgtgcgat ttatttcaca
     4621 gcgtaactta aatcaacaac gggtagtaca attcgccaat cacgctgtag aggaattaga
     4681 taaagtactg cttcccctac aggcaggtag cgaagtcttg cttccgctga ttggtctgcc
     4741 ctgctctgtc gcccatttgc cattacgtaa acaggcggca aaactccaaa ctgtgcgatc
     4801 cattggcctg gtgcaagacg gcacactcta ttgctccagc atttttggtt atcgcaatgt
     4861 gcccgtcgtg gacattctgg ctgaacttcc tgcaccgcaa ccacttttac gcctgacgat
     4921 cgaccgtgcc ctgattaaag gcagtccggt tttgattcaa tggacgcctg cagcgggcag
     4981 tagcaatgct ggggtcatgg agatgattaa catcgactta ctgacggcaa tgctccttga
     5041 gccacaactg ccgcaaatca gtagcgccag cctgacggtg gacaaacggc atttgctcta
     5101 tggtaatggg ctggtagatt cccttccgca acctgaagac aatgaaaact atcaggtttc
     5161 ttcgcaacgc tttcctttta ccattaacgt taatggtccg ggggctacgg cgctggcatg
     5221 gcactatctt ccaacacaat taccgctggc ggtgctgcta agtttactgg tgggctacat
     5281 cgcctggctg gcgaccgctt accggatgag cttttcccgc gaaatcaatc tgggcctggc
     5341 gcaacatgag ttcgaattgt tctgtcagcc tttgcttaat gcgcgcagcc agcaatgtat
     5401 tggtgtagag attttgctgc gctggaacaa tccgcgtcag ggctggattt caccggatgt
     5461 gtttattcct atcgcggaag aacatcattt aattgtgcca ctgacccgct atgtgatggc
     5521 agaaaccatt cgtcagcgcc atgttttccc gatgagtagt cagtttcatg ttggcattaa
     5581 cgtcgcaccc agccattttc gccgtggtgt gctgataaaa gatctcaatc agtactggtt
     5641 tagcgctcac ccgattcagc aactgatcct cgaaatcacc gaacgcgatg ccttactgga
     5701 tgttgattat cggattgccc gcgagctaca tcgtaaaaac gtcaaactgg cgattgatga
     5761 cttcggcacc ggcaacagtt cattttcctg gcttgaaaca ttacgtcctg acgtgctgaa
     5821 aattgataag tcatttaccg cagctatagg ttctgacgcg gttaactcga cggtgaccga
     5881 tatcatcatc gcgctggggc aaagactgaa tattgaactg gtggcggagg gcgtggaaac
     5941 gcaagaacag gcgaagtatt tgcgccgtca tggcgtgcat attttgcaag ggtatttgta
     6001 cgcacagccg atgccgctac gtgattttcc caaatggctg gcgggcagcc aaccgccgcc
     6061 cgcccggcat aatggacata tcacgcccat tatgccgtta cgttaacgct tactcatctt
     6121 catcgtgcgc cggttgctct ttaacaatgc gaaccagatc aacacgataa tcattggctt
     6181 caatgatggt gatatgcagt ggccctacat caatcacatc gcccacacgg ggaatgtgac
     6241 catttgccga gatcacgagg cccgcgaccg tcgcgatatc atcgtcatcg gcaaggtgct
     6301 caacatcaag cgcctgctgc aaggcatgca aatctgtacc gccttttacc agccagccgt
     6361 caccatcagt aatgatttcc ggcgtttcgt cagcgtccgg gaattcaccc gcaatggctt
     6421 ccagcacatc cagcggcgtg accagacctt gtaccacacc aaactcgttg gtcacgataa
     6481 caaagctccc gcgagcacga cgcagcacgc ccaacaggtt gatcggatcg agggtttccg
     6541 ggacgataat cgccggagac gccgaagcaa tcgccgccac atcaacgccc tcttccagcg
     6601 ccaccagcag ttctttagca cgtacaatac cgatgatttc atccagttca ccgcgacata
     6661 ccgggaacag actgtgcggt gaagagagca gttgctcgcg gatttcatcg accccgagat
     6721 tagcgtcaac ccagcttatt tcaccgcgcg gcgtcatgat cccgcgcaga gaacgcgacg
     6781 ccagcgtcag tacgccgtta atcatgtaac gttcttcttc ggcaaatgca ccttccggga
     6841 tcggcatcgg catcgggtta tcggcatcgt gctgaacatt ggcctgacgt ttcccgccca
     6901 tcaaacgcag gatggcatcg gcagtacgcg ctcgcagcgg caaagtcgac tggtggcgaa
     6961 taaagttgcg acgcgcaatc tggttaaaca cttcgatgat gatcgagaag ccaatcgcgg
     7021 catacaggta acctttcgga atgtggaaac cgaaaccttc tgccaccaga ctcagaccaa
     7081 tcattaacag gaagctcaga cagagcacca ccaccgtggg gtgctggtta acgaatcgcg
     7141 tcagcggttt ggatgccagc aacataaccg ccatcgcaat cactaccgcc gccatcatca
     7201 ccggcagatg gttaaccatc cctactgcag taattaccgc atccaacgag aagacggcgt
     7261 caaggatgac aatctgtgtg acgaccaccc agaaactggc gtagccttta ccgtggccgg
     7321 aatcatgatc gcggttttcc agccgttcat gcagttcggt tgttgctttg aacagcaaga
     7381 atatcccccc gaacaacata atcaggtcgc gtccggagaa ggagaaatcc atgacggtaa
     7441 atagcggttt ggtcagcgtg accatccatg aaatcagcga cagcagcccc agacgcataa
     7501 tcagcgccag tgataacccc agcaaacgcg ctttatcgcg ttgttttggc ggcagtttgt
     7561 cagcaagaat ggcgatgaag accaggttat cgatacccag cacaatttcg agaacaacaa
     7621 gcgtgagtag ccccgcccaa attgaggggt ccattaagaa ttccatgaca agctcctgct
     7681 taaggaatag ctattcgacg ccagaaataa tgcaggcgta acgacaaaat gcaaacgaaa
     7741 ggtgcggcat agagagccag aaaggtaggc gttaaaaggc ctgatgctga aatgacgtcg
     7801 gtgacgatcc atactgcggg ctactgccct atactccatg gttgttaaac gggagttaaa
     7861 catatcagag acgcctctga tttggcaaag atttaccttc ctttgcaaac gaatgtgaca
     7921 aggatatttt acctttcgaa atttctgcta atcgaaagtt aaattacgga tcttcatcac
     7981 ataaaataat tttttcgata tctaaaataa atcgcgaaac gcaggggttt ttggttgtag
     8041 cccttatctg aatcgattcg attgtggacg acgattcaaa aatacatctg gcacgttgag
     8101 gtgttaacga taataaagga ggtagcaagt gaccattgct attgttatag gcacacatgg
     8161 ttgggctgca gagcagttgc ttaaaacggc agaaatgctg ttaggcgagc aggaaaacgt
     8221 cggctggatc gatttcgttc caggtgaaaa tgccgaaacg ctgattgaaa agtacaacgc
     8281 tcagttggca aaactcgaca ccactaaagg cgtgctgttt ctcgttgata catggggagg
     8341 cagcccgttc aatgctgcca gccgcattgt cgtcgacaaa gagcattatg aagtcattgc
     8401 aggcgttaac attccaatgc tcgtggaaac gttaatggcc cgtgatgatg acccaagctt
     8461 tgatgaactg gtggcactgg cagtagaaac aggccgtgaa ggcgtgaaag ctctgaaagc
     8521 caaaccggtt gaaaaagccg cgccagcacc cgctgccgca gcaccaaaag cggctccaac
     8581 tccggcaaaa ccaatggggc caaacgacta catggttatt ggccttgcgc gtatcgacga
     8641 ccgtctgatt cacggtcagg tcgccacccg ctggaccaaa gaaaccaatg tctcccgtat
     8701 tattgttgtt agtgatgaag tggctgcgga taccgttcgt aagacactgc tcacccaggt
     8761 tgcacctccg ggcgtaacag cacacgtagt tgatgttgcc aaaatgattc gcgtctacaa
     8821 caacccgaaa tatgctggcg aacgcgtaat gctgttattt accaacccaa cagatgtaga
     8881 gcgtctcgtt gaaggcggcg tgaaaatcac ctctgttaac gtcggtggta tggcattccg
     8941 tcagggtaaa acccaggtga ataacgcggt ttcggttgat gaaaaagata tcgaggcgtt
     9001 caagaaactg aatgcgcgcg gtattgagct ggaagtccgt aaggtttcca ccgatccgaa
     9061 actgaaaatg atggatctga tcagcaaaat cgataagtaa cgtattgtgt tgattatcac
     9121 tcagttttca cacttaagtc ttacgtaaac aggagaagta caatggagat taccactctt
     9181 caaattgtgc tggtatttat cgtagcctgt atcgcaggta tgggatcaat cctcgatgaa
     9241 tttcagtttc accgtccgct aatcgcgtgt accctggtgg gtatcgttct tggggatatg
     9301 aaaaccggta ttattatcgg tggtacgctg gaaatgatcg cgctgggctg gatgaacatc
     9361 ggtgctgcag ttgcgcctga cgccgctctg gcttctatca tttctaccat tctggttatc
     9421 gcaggtcatc agagcattgg tgcaggtatc gcactggcaa tccctctggc cgctgcgggc
     9481 caggtactga ccatcatcgt tcgtactatt accgttgctt tccagcacgc tgcggataag
     9541 gctgctgata acggcaacct gacagcgatt tcctggatcc acgtttcttc tctgttcctg
     9601 caagcaatgc gtgtggctat tccggccgtc atcgttgcgc tgtctgttgg taccagcgaa
     9661 gtacagaaca tgctgaatgc gattccggaa gtggtgacca atggtctgaa tatcgccggt
     9721 ggcatgatcg tggtggttgg ttatgcgatg gttatcaaca tgatgcgtgc tggctacctg
     9781 atgccgttct tctacctcgg cttcgtaacc gcagcattca ccaactttaa cctggttgct
     9841 ctgggtgtga ttggtactgt tatggcagtg ctctacatcc aacttagccc gaaatacaac
     9901 cgcgtagccg gtgcgcctgc tcaggcagct ggtaacaacg atctcgataa cgaactggac
     9961 taacaggtga gcgaaatggt tgatacaact caaactacca ccgagaaaaa actcactcaa
    10021 agtgatattc gtggcgtctt cctgcgttct aacctcttcc agggttcatg gaacttcgaa
    10081 cgtatgcagg cactgggttt ctgcttctct atggtaccgg caattcgtcg cctctaccct
    10141 gagaacaacg aagctcgtaa acaagctatt cgccgtcacc tggagttctt taacacccag
    10201 ccgttcgtgg ctgcgccgat tctcggcgta accctggcgc tggaagaaca gcgtgctaat
    10261 ggcgcagaga tcgacgacgg tgctatcaac ggtatcaaag tcggtttgat ggggccgctg
    10321 gctggtgtag gcgacccgat cttctgggga accgtacgtc cggtatttgc agcactgggt
    10381 gccggtatcg cgatgagcgg cagcctgtta ggtccgctgc tgttcttcat cctgtttaac
    10441 ctggtgcgtc tggcaacccg ttactacggc gtagcgtatg gttactccaa aggtatcgat
    10501 atcgttaaag atatgggtgg tggcttcctg caaaaactga cggaaggggc gtctatcctc
    10561 ggcctgtttg tcatgggggc attggttaac aagtggacac atgtcaacat tccgctggtt
    10621 gtctctcgca ttactgacca gacgggcaaa gaacacgtta ctactgtcca gactattctg
    10681 gaccagttaa tgccaggcct ggtaccactg ctgctgacct ttgcttgtat gtggctactg
    10741 cgcaaaaaag ttaacccgct gtggatcatc gttggcttct tcgtcatcgg tatcgctggt
    10801 tacgcttgcg gcctgctggg actgtaagac tgttgtacac taccggggcc ttttggcccc
    10861 gtttttttat ctggaggatt aatgacaatc acggacctgg tactgattct tttcatcgcc
    10921 gcactcctgg ccttcgcgat ctacgatcag ttcatcatgc cccgccgtaa cggccccacc
    10981 ctgctggcaa ttcctttgct ccggcgtggt cgcatcgata gcgttatctt cgtcggattg
    11041 attgtcattc ttatctataa caacgtcacg aatcatggtg cgttaataac gacatggtta
    11101 ttaagcgcac tggctctgat gggtttttat atattctgga tccgcgttcc gaagatcatc
    11161 tttaaacaaa aaggtttttt cttcgccaat gtctggattg aatatagccg aatcaaagcg
    11221 atgaacttgt cggaagatgg cgtgttggtg atgcaattag aacagcgtcg gctgttaatc
    11281 cgcgttcgaa atatcgacga tctggaaaaa atttataagc ttctcgtttc aactcaataa
    11341 gttatgaatt tagccaaagc tatgtttagt gtattttta
//
LOCUS       DAPGWB010000142        11358 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.144, whole genome shotgun sequence.
ACCESSION   DAPGWB010000142 DAPGWB010000000
VERSION     DAPGWB010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11358
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.144"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            197..700
                     /gene="dps"
                     /locus_tag="RHX79_003657"
                     /gene_synonym="pexB"
     CDS             197..700
                     /gene="dps"
                     /locus_tag="RHX79_003657"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001730644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HDV2198777.1"
                     /translation="MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLS
                     LITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT
                     PLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLW
                     FIESNIE"
     gene            1104..1850
                     /gene="glnH"
                     /locus_tag="RHX79_003658"
     CDS             1104..1850
                     /gene="glnH"
                     /locus_tag="RHX79_003658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter substrate-binding
                     protein GlnH"
                     /protein_id="HDV2198778.1"
                     /translation="MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGD
                     KYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAID
                     FSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN
                     IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDEL
                     RDKVNGALKTLRENGTYNEIYKKWFGTEPK"
     gene            1989..2648
                     /gene="glnP"
                     /locus_tag="RHX79_003659"
     CDS             1989..2648
                     /gene="glnP"
                     /locus_tag="RHX79_003659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015367581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter permease GlnP"
                     /protein_id="HDV2198779.1"
                     /translation="MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFAR
                     TFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSG
                     AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK
                     DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI
                     L"
     gene            2645..3367
                     /gene="glnQ"
                     /locus_tag="RHX79_003660"
     CDS             2645..3367
                     /gene="glnQ"
                     /locus_tag="RHX79_003660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000569103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter ATP-binding protein
                     GlnQ"
                     /protein_id="HDV2198780.1"
                     /translation="MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLL
                     RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP
                     LRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
                     DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG
                     DPQVLIKNPPSQRLQEFLQHVS"
     gene            3484..5709
                     /gene="ybiO"
                     /locus_tag="RHX79_003661"
     CDS             3484..5709
                     /gene="ybiO"
                     /locus_tag="RHX79_003661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel protein"
                     /protein_id="HDV2198781.1"
                     /translation="MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQ
                     KKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEV
                     SRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCAL
                     PLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRT
                     IAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIG
                     YGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLA
                     FFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSG
                     MFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFD
                     FWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRT
                     LLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGV
                     FIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGI
                     GSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLVIGEPNFAGIVGLSNTAFTL
                     RVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGAAPAEPLPPGEPT
                     L"
     gene            complement(5706..6632)
                     /gene="rlmF"
                     /locus_tag="RHX79_003662"
     CDS             complement(5706..6632)
                     /gene="rlmF"
                     /locus_tag="RHX79_003662"
                     /EC_number="2.1.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(1618)-N(6))-methyltransferase
                     RlmF"
                     /protein_id="HDV2198782.1"
                     /translation="MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSV
                     DFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIP
                     ANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLR
                     RQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGG
                     QQQELWCEGGEVAFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVV
                     KKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR"
     gene            6908..7168
                     /locus_tag="RHX79_003663"
     CDS             6908..7168
                     /locus_tag="RHX79_003663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415327.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HDV2198783.1"
                     /translation="MKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATG
                     ASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTATIYK"
     gene            7433..9715
                     /locus_tag="RHX79_003664"
     CDS             7433..9715
                     /locus_tag="RHX79_003664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catecholate siderophore receptor Fiu"
                     /protein_id="HDV2198784.1"
                     /translation="MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTL
                     VVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVG
                     AFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTD
                     YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGE
                     KTHDAGRDKVKNERYGVAPSIAFGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSA
                     PSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVK
                     QDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGH
                     DVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYA
                     FDTLQITRDFELNGGIRLDNYHTEYDSATACGGSGRGAITCPAGVAKGSPVTTVDTAK
                     SGNLVNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRTDFKPQKA
                     NTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISVAGNI
                     TPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGAR
                     YIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNVYNLFDTAYVASINKS
                     GYRYHPGEPRTFLLTANMHF"
     gene            9757..10434
                     /gene="ybiX"
                     /locus_tag="RHX79_003665"
     CDS             9757..10434
                     /gene="ybiX"
                     /locus_tag="RHX79_003665"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKHD-type hydroxylase YbiX"
                     /protein_id="HDV2198785.1"
                     /translation="MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQ
                     QVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVR
                     SHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCV
                     TPVTRGVRVASFMWIQSMIRDDKKRAMLFELDNNIQSLKSRYGESEEILSLLNLYHNL
                     LREWSEI"
     gene            10508..10774
                     /gene="ybiI"
                     /locus_tag="RHX79_003666"
     CDS             10508..10774
                     /gene="ybiI"
                     /locus_tag="RHX79_003666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc finger protein YbiI"
                     /protein_id="HDV2198786.1"
                     /translation="MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGA
                     PIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR"
     gene            11039..11299
                     /locus_tag="RHX79_003667"
     CDS             11039..11299
                     /locus_tag="RHX79_003667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HDV2198787.1"
                     /translation="MKTINTVIAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADG
                     ASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK"
BASE COUNT         2803 a         2948 c         2857 g         2750 t
ORIGIN      
        1 gaaaattcct ggcgagcaga taaataagaa ttgttcttat caatatatct aactcattga
       61 atctttatta gttttgtttt tcacgcttgt taccactatt agtgtgatag gaacagccag
      121 aatagcggaa cacatagccg gtgctatact tagtctcgtt aattactggg acataacatc
      181 aagaggatat gaaattatga gtaccgctaa attagttaaa tcaaaagcga ccaatctgct
      241 ttatacccgc aacgatgtct ccgacagcga gaaaaaagca acagtagagt tgctgaatcg
      301 ccaggttatc cagtttattg atctttcttt gattaccaaa caagcgcact ggaacatgcg
      361 cggcgctaac ttcattgccg tacatgaaat gctggatggc ttccgcaccg cactgatcga
      421 tcatctggat accatggcag aacgtgcagt gcagctgggc ggtgtagctc tggggaccac
      481 tcaagttatc aacagcaaaa ccccgctgaa aagttacccg ctggacatcc acaacgttca
      541 ggatcacctg aaagaactgg ctgaccgtta cgcaatcgtc gctaatgacg tacgcaaagc
      601 gattggcgaa gcgaaagatg acgacaccgc agatatcctg accgccgcgt ctcgcgacct
      661 ggataaattc ctgtggttta tcgagtctaa catcgaataa atccatcgct gatggtgcag
      721 aactttagta cccgataaaa gcggcttcct gacaggaggc cgttttgttt tgcagcccac
      781 ctcaacgcac ttatttagtg catccatctg ctatctccag ctgattaagt aaattttttg
      841 tatccacatc atcacacaat cgttacataa agattgtttt ttcatcaggt tttacgctaa
      901 ataatcactg tgttgagtgc acaattttag cgcaccagat tggtgcccca gaatggtgca
      961 tcttcagggt attgccctat aaatcgtgca tcacgttttt gccgcatctc gaaaaatcaa
     1021 ggagttgcaa aactggcacg attttttcat atatgtgaat gtcacgcagg ggatcgtccc
     1081 gtggatagaa aaaaggaaat gctatgaagt ctgtattaaa agtttcactg gctgcactga
     1141 ccctggcttt tgcggtttct tctcatgccg cggataaaaa attagttgtc gcgacggata
     1201 ccgccttcgt tccgtttgaa tttaaacagg gcgataaata tgtgggcttt gacgttgatc
     1261 tgtgggctgc catcgctaaa gagctgaagc tggattacga actgaagccg atggatttca
     1321 gtgggatcat tccggcactg caaaccaaaa acgtcgatct ggcgctggcg ggcattacca
     1381 tcaccgacga gcgtaaaaaa gcgatcgatt tctctgacgg ctactacaaa agcggcctgt
     1441 tagtgatggt gaaagctaac aataacgatg tgaaaagcgt gaaagatctc gacgggaaag
     1501 tggttgctgt gaagagcggt actggctccg ttgattacgc gaaagcaaac atcaaaacta
     1561 aagatctgcg tcagttcccg aacatcgata acgcctatat ggaactgggc accaaccgcg
     1621 cagacgccgt tctgcacgat acgccaaaca ttctgtactt catcaaaacc gccggtaacg
     1681 gtcagttcaa agcggtaggt gactctctgg aagcgcagca atacggtatt gcgttcccga
     1741 aaggtagcga cgagctgcgt gacaaagtca acggcgcgtt gaaaaccctg cgcgagaacg
     1801 gaacttacaa cgaaatctac aaaaaatggt tcggtactga accgaaataa taacgctaca
     1861 cctgtaaaac gcactggcag ttccctctcc cctctgggga gaggattagg gtgaggggcg
     1921 caaacccgct ccggggccat taattaccct gaatttgatt atttacacca cggtaacagg
     1981 aacaacatat gcagtttgac tggagtgcca tctggcctgc cattccgctt ctgattgaag
     2041 gtgccaaaat gaccctgtgg atttcggtcc tcggtctggc aggcggtctg gtaatcggat
     2101 tgctggcagg ttttgcacgc accttcggtg gttggatagc caaccacgtc gcgctggtct
     2161 ttattgaagt gatccgcggc acacctatcg tcgtccaggt gatgtttatc tatttcgccc
     2221 tgccgatggc gtttaacgac ttacgcatcg acccatttac tgcggcggtg gtcaccatca
     2281 tgatcaactc cggcgcgtac attgcggaaa tcacgcgtgg tgcggtgctg tctattcaca
     2341 aaggttttcg tgaagcagga ctggcgctcg gtctttcacg ttgggaaacc attcgctacg
     2401 tcattttacc gctggcactg cgtcgtatgc tgccgccgct gggtaaccag tggatcatca
     2461 gcattaaaga cacctcgctg tttattgtta tcggcgtggc ggaactgacc cgtcaggggc
     2521 aagaaattat tgccggtaac ttccgcgccc ttgagatctg gagcgccgtg gcggtgttct
     2581 atctgattat taccctggtg ctgagcttta ttctgcgtcg tctggaaaga aggatgaaaa
     2641 tcctgtgatt gaatttaaaa acgtctccaa gcattttggt ccaacccagg tgctgcacaa
     2701 tatcgatttg aacattgctc agggcgaagt cgtggtgatt atcgggccgt ccggttccgg
     2761 taaatcgacc ctgctgcgct gcatcaacaa actggaagaa atcacctccg gcgatctgat
     2821 tgtcgatggc ctgaaggtta acgatccgaa agttgacgag cgcctgattc gccaggaagc
     2881 gggtatggtg ttccagcagt tttacctctt cccgcatctg acggcgctgg aaaacgtcat
     2941 gtttggtccg ctacgcgtgc gtggcgcgaa caaagaagag gcggaaaaac tggcgcgtga
     3001 gctgctggcg aaagtcggtc tggcagaacg tgcacatcac tacccttccg aactttctgg
     3061 tggtcaacag cagcgtgtgg cgattgcccg cgcgctggcg gtgaagccga aaatgatgct
     3121 gtttgatgaa ccgacttccg ctcttgaccc ggaactgcgc catgaagtgc tgaaggttat
     3181 gcaggatctg gctgaagaag ggatgacgat ggtgatcgtg acccacgaaa tcggttttgc
     3241 cgagaaagta gcttcgcggc tgatctttat cgacaaaggc cggattgcgg aagatggcga
     3301 tccgcaggta ttgatcaaga acccgccgag ccagcgcttg caggaatttt tgcagcacgt
     3361 ctcttaactt ctctgcctcc ctttcacccg aaagggaggc acaccagatt cctctcattt
     3421 aaaatcgccc ctcccccagc atctatactt atctttttgc tctgttttct cactggagga
     3481 gtcatgcggt ggatcctgtt catcctcttc tgcctgctgg gcgcacctgc ccacgcggta
     3541 tccatacccg gcgttacaac cacaacgaca acggactcaa cgactgaacc ggccccggaa
     3601 ccggatatcg aacaaaaaaa agcggcctat ggcgcactgg cggatgtgct ggataacgac
     3661 acctcgcgta aagaattgat cgaccagttg cgtactgtcg ccgcgacgcc ccctgcggaa
     3721 ccggtcccga agatcgtgcc gccgacgctg gttgaagagc aaaccgtgct gcaaaaagtc
     3781 accgaagtca gccgccatta tggtgaagcc ctttccgccc gcttcggaca actttatcgc
     3841 aatatcaccg gctccccgca taagccgttt aatccacaaa ccttcagcaa tgcgttgacc
     3901 catttttcaa tgttagcggt attagtgttt ggtttttact ggctgattcg tctgtgcgca
     3961 ctgccgctgt atcgcaaaat gggccagtgg gcgcggcaaa aaaatcgcga acgcagcaac
     4021 tggctgcagc ttccggcgat gattatcggg gcgtttatta tcgacctact gttactggca
     4081 ctgacattgt ttgtcggcca ggtattaagc gacaacctga atgcgggcag tcgcaccatc
     4141 gctttccaac aaagtttgtt tctcaacgcc tttgccctga ttgaattttt caaagctgta
     4201 ctacgcctga ttttttgccc aaatgtggcg gagctgcgcc cgttcacgat tcaggacgag
     4261 agcgcccgtt actggagtcg tcgcctgagc tggttaagca gcctgattgg ctatggcctg
     4321 attgtggccg tgccgattat ctctaatcag gtgaatgtac agataggtgc gctggcgaac
     4381 gtcatcatta tgctgtgcat gaccgtctgg gcgttgtacc tgatcttccg aaataaaaaa
     4441 gagattaccc aacatttgct caactttgcg gagcattcgc tggccttttt cagcctgttt
     4501 atccgcgcct ttgcgctggt gtggcactgg ctggcaagcg cctattttat cgtgctgttt
     4561 ttcttttcgt tgttcgatcc gggcaacagc ctgaaattta tgatgggtgc aacggtgcgc
     4621 agcctggcga ttattggtat cgcagcgttt gtttccggta tgttttcccg ctggctggca
     4681 aaaaccatca ctctctcgcc acatactcag cgtaactatc cggagttgca aaaacggctg
     4741 aatggctggc tttcggcggc actgaaaacg gcgcgtattc tgaccgtctg cgtggcggta
     4801 atgttgctgt tgagcgcatg gggattgttc gatttctgga actggctgca aaacggcgcg
     4861 gggcagaaaa ccgtagatat cctgatccgc atcgcactca ttcttttctt ctcggcggtt
     4921 ggctggacag tgctcgccag tttgatcgaa aaccggctgg cttcggatat tcatggccgc
     4981 ccgctaccca gcgcccgtac gcgtaccctg ctgacgctgt tccgtaacgc gctggcggtg
     5041 attatcagta ccatcaccat catgattgtg ttgtcggaaa tcggcgtcaa tatcgcgcca
     5101 ttgctggcag gtgctggggc attaggtctg gctatctcgt ttggttcgca aacgctggtg
     5161 aaagatatta tcaccggggt atttattcag tttgaaaacg gcatgaacac tggagatttg
     5221 gttactatcg ggccgttgac cggcactgtg gaacggatgt cgattcgctc cgtgggcgtg
     5281 cgtcaggata ccggggcgta tcacatcatt ccgtggtctt cgataaccac ctttgctaac
     5341 ttcgtccgcg gcattggttc ggtggtggca aactacgatg ttgatcgcca tgaagatgct
     5401 gataaagcca atcaggcact gaaagatgcg gtagcggaat tgatggaaaa cgaagaaatt
     5461 cgcgggctgg ttattggtga accaaacttt gccgggattg tcggcttaag caataccgcg
     5521 tttacactgc gtgtttcgtt caccacgctg ccactcaaac agtggacggt ccgctttgcc
     5581 ctcgacagcc aggtgaaaaa gcatttcgac ctggcaggtg ttcgcgcgcc agtgcagact
     5641 tatcaggtgc tgcctgctcc gggcgcggcc ccggctgaac cgctgccgcc gggggagcca
     5701 acgctttaac gttggcgatt aacaaaacgg cggcgctgct cgtcgttcat aaaggtccag
     5761 gcaataaagc gactctgctt ttgcccctgg gccatctctt ttttaaccac cttcaccgcg
     5821 cccacgtccg tcagagcacg atacaacggc ggtaagtttt caccacgaga aaccagcgag
     5881 gtaaaccaca tcacctgctt cgcgaagcct ttgctctctt caatcatctt tttgataaag
     5941 gcgacttcac caccttcaca ccacaactcc tgttgctgac caccaaagtt cagtgcatcg
     6001 tctttgttca gccccaggtt acggcgttta cgctcactac ctgcccgcgc cgcagcggcg
     6061 gaatcgtgga atggcgggtt acacaaggtc gcgtcgtatt gctcgttttt atggatgatg
     6121 ccgttaaaaa tcgccccact ctctttttgc cgacgcagac gaatggcgcg gttaagcccc
     6181 ggattagcac tgatgatcgc ctgcgcactg cttaacgcct ggctgctggt ttcactaccg
     6241 gtaaaacgcc agccatattc atgtacgcca atcagcggat aaatacagtt cgcaccaacg
     6301 ccgatatcca gaatgctggc attagctgga attgttccgc ttgcttctgc cagtaaatcg
     6361 gcaaggtgat gaatataatc cgcccggccc ggtactggcg gacagagaaa accgtccggg
     6421 atatcccagt tcgctacggc gtaaaaatgg gccagcaacg ccttattgag cgccttcacc
     6481 gccagcggat tggcaaagtc tacgctttgc tcccctgcgg gtgtaagcgt gaggaattgc
     6541 ctgagttcag gattgacctg acaaagcgtg gcgagatcgt agcggctgtg atgacggttg
     6601 cgcggatgca accccggttt ctgggcggac atagcattct cctttaagca gcggcgtaag
     6661 atacccgcat aacgcgacag ggtaaatatc tggctgcgtt tatcattccc caaaacctta
     6721 acatggctat ggtttatggc aattcatcat aaaaatcagc attatgcatg tcattgattt
     6781 gtcttatttt gtaaaaatat gtcgttcaaa aaataagcac atctctgtca attttttgcg
     6841 tcatttgcat cgcgcaggcg acctacactt atcaggcact acccgttgta tttatgagga
     6901 tgtcattatg aaaaagtgcc tcacactact gattgccacc gtcctgagcg gaatctctct
     6961 cacggcttat gccgcgcaac cgatgagtaa cctggacagc ggtcagctac ggcccgccgg
     7021 taccgtttcg gcaactggcg catcaaacct aagcgatctg gaggataaac tggcagaaaa
     7081 agcgcgcgag caaggcgcga aaggttatgt cattaattcc gcaggcggaa atgaccagat
     7141 gttcggtact gcaaccatct acaaataacc ccaccaacgt aactgcattc gcctctggat
     7201 gcagttttcg cctgttttgt aatcaaaaaa catcaaatat gaacgcaatg taaataaatg
     7261 tatttctttt tcgcgcaatg ggtgatagaa aatcgcgcca agtgataatg cttatcaaaa
     7321 ttattatcac ttgaacgaac actatcacga gattaacagt ggcatcgcat ccgcagagag
     7381 gctttctcgt ggcagtgaaa atttcaacat ataaaaaaaa gtcacctgca aaatggaaaa
     7441 caatcgcaat ttccctgcca gacaatttca ttcgctcacg ttctttgccg gtctttgtat
     7501 tggcatcacg cctgtggctc aggcactcgc cgccgaaggg caaactaacg cggatgacac
     7561 gctggttgtc gaagcatcaa cgccttcgct ttatgcgcca caacaatctg ccgatccgaa
     7621 attctcgcgt ccggtagcgg atactacccg cacgatgacg gtgatttctg aacaagtgat
     7681 taaagatcag ggcgcaacca accttaccga cgcgctcaaa aacgtccccg gcgtgggtgc
     7741 gttttttgcg ggtgagaacg gtaactccac cactggcgac gccatttata tgcgcggtgc
     7801 tgatacctct aacagtattt atattgatgg cattcgcgat atcggcagcg tctcgcgcga
     7861 caccttcaat actgagcagg tcgaagtgat taaagggcct tccggcaccg actacgggcg
     7921 cagcgcgccg acgggctcga tcaatatgat cagcaagcag ccgcgcaatg attccggcat
     7981 tgacgcctcc gccagtattg gcagcgcctg gttccgccgc ggcacgctgg acgtcaatca
     8041 ggtcattggt gataccactg cggtgcgcct gaatgtgatg ggcgaaaaaa cgcacgatgc
     8101 cggacgcgac aaagtcaaaa atgagcgtta cggcgtcgcc ccttctatcg cttttggcct
     8161 tggtacagcg aatcgtttgt atcttaatta tctgcatgtc acccagcaca acacgccaga
     8221 cggcggcatt ccgaccatcg gtttgccggg ttattctgcc ccatctgcgg gaacagcggc
     8281 tctgaatcat tccggaaaag ttgatactca taacttttac ggcacggatt ccgattacga
     8341 cgattcgacc accgacaccg ccaccatgcg ttttgagcac gacatcaacg ataacaccac
     8401 cattcgcaat actacccgtt ggtcgcgcgt aaagcaggat tacctgatga cggcgattat
     8461 gggcggggcg tcgaatatta ctcagcccac cagcgatgtg aatagctgga cctggtcacg
     8521 cacggcgaat accaaagatg tgagtaataa aattctcacc aaccagacca acctgacctc
     8581 gacgttctat accggttcta tcggtcatga tgtcagtacc ggcgtggaat ttacccgtga
     8641 aacgcagact aactacggcg ttaatccggt gacgttaccc gcggtaaata tttatcatcc
     8701 tgacagcagc attcatcccg gcggcctgac gcgcaacggc gcaaacgcca atggtcagac
     8761 ggataccttc gcaatttacg ccttcgatac gctgcaaatc acccgtgatt ttgagctgaa
     8821 cggcgggatc cgtctggata attatcatac tgaatatgac agtgccaccg cctgcggcgg
     8881 cagcggacgc ggtgccatca cctgcccagc tggtgtggca aaaggttctc cggtcaccac
     8941 cgtcgacacc gccaagtcgg gcaatctggt gaactggaaa gccggggcgc tgtatcacct
     9001 gacggaaaac ggtaatgtct atattaacta tgccgtttcc cagcagcctc cgggcggcaa
     9061 caacttcgcc cttgcgcagt ctggcagcgg taacagtgcc aaccgcaccg attttaaacc
     9121 gcaaaaagcc aacaccagcg agattggcac caaatggcag gttctggata aacgcctgtt
     9181 gctcaccgcc gcgctgttcc gtactgatat cgaaaatgaa gttgagcaaa atgatgacgg
     9241 aacttactcg caatacggta agaaacgtgt cgaaggctat gagatatccg tggccgggaa
     9301 tatcactccc gcgtggcagg tgattggcgg ctatacccag caaaaagcaa ccatcaaaaa
     9361 cggcaaagat gttgcccagg atggttcctc atcgctgccg tataccccgg agcacgcctt
     9421 caccttatgg agccagtatc aggcaaccga tgatatctct gttggcgcgg gcgcacgcta
     9481 tatcggcagt atgcataaag gttcagacgg cgcggtggga acgccagcgt ttaccgaagg
     9541 ttactgggtc gccgatgcca aactggggta tcgggttaat cgcaatctcg acttccagct
     9601 aaacgtctac aacctgtttg ataccgctta cgtcgcctca atcaataaga gcggctaccg
     9661 ttatcacccg ggcgagccaa gaaccttcct gctcacggcc aatatgcatt tctgattcag
     9721 atgtggggcg caggccccac tttttggaga acttgtatga tgtaccacat tcccggcgtg
     9781 ttatcgccac aggacgtcgc ccgttttcgc gaacaactgg aacaagccga atgggtggat
     9841 gggcgcgtca ccaccggcgc acaaggtgcg caagttaaga acaatcaaca ggtagacacc
     9901 cgcagcacgt tatacgccgc cctgcaaaat gaggtgctga acgcggttaa ccaacatgct
     9961 ttattctttg ccgcggcctt gccgcgtacc ctttccacgc cgctgtttaa tcgctatcag
    10021 aacaatgaaa cctatggttt tcatgtggat ggcgcagtac gcagccatcc acaaaacggc
    10081 tggatgcgca ctgacctttc tgccacgctg tttttaagcg atccacaaag ctacgacggc
    10141 ggcgaactgg tcgttaatga caccttcgga caacatcggg taaaactccc ggcaggtgat
    10201 ctcgtgttgt atccctccag cagcctgcat tgcgtgacac ccgtaacccg cggcgtacga
    10261 gtggcatcat ttatgtggat ccagtcgatg atccgtgatg ataaaaagcg cgccatgctg
    10321 tttgaactgg acaacaatat tcagtcgctg aaaagccgct acggcgaaag tgaagagatc
    10381 ctgtcactgc tcaatcttta tcataatctg ctgcgggaat ggtcggagat ctgacgcttg
    10441 aactgcccga gttcgtccct ggattagcta cacttaactg tacaagtatt gatatgggga
    10501 ggacgatatg gcatccggtt gggctaacga tgacgccgtc aacgaacaga tcaacagtac
    10561 aattgaagat gcgattgccc gcgctcgggg tgaaattccg cgtggcgaaa gcctgtatga
    10621 atgtgaagag tgcggagccc ccatcccgca agcccgtcgg gaagccattc ctggtgtgcg
    10681 cttatgcatt cattgtcagc aggagaaaga tttacaaaaa ccagcttata caggatataa
    10741 tcgcagaggt tcgaaagaca gccagttacg ttaactacaa ctggcgggat gtatagcgag
    10801 tataatttgt attttgcgtg gcattccgtg cctttaacgc tgtcgtgact gccacgctgc
    10861 ataaaacaag tccataagtt caacaaataa atggtttatc agtatgttag atatcaatca
    10921 atttatttga acaaggcggt caattctctt cgattttatc tctcgtaaaa aaacgtgata
    10981 ctcatcacat cgacgaaaca acgtcactta tacaaaaatc acctgcgaga gattaattat
    11041 gaaaactatc aatactgtta ttgctgctat ggctctttca actctgtcat ttggcgtgtt
    11101 tgccgcggaa ccggtaacgg catcccaggc acagaacatg aataaaatcg gcgtggtttc
    11161 tgccgatggc gcatccaccc tcgatgccct ggaagcgaaa ctggctgaga aagctgcggc
    11221 agccggtgcc agtggataca gcatcacttc tgccaccaac aacaataaat taagcggtac
    11281 tgcggtaatt tataagtaat tcgtaggacg gataaggcgt ttacgccgca tccggcaaca
    11341 gatgcctgat gcgacgct
//
LOCUS       DAPGWB010000143        11243 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.145, whole genome shotgun sequence.
ACCESSION   DAPGWB010000143 DAPGWB010000000
VERSION     DAPGWB010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11243
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.145"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            417..1031
                     /gene="evgA"
                     /locus_tag="RHX79_003668"
     CDS             417..1031
                     /gene="evgA"
                     /locus_tag="RHX79_003668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system DNA-binding response
                     regulator EvgA"
                     /protein_id="HDV2198788.1"
                     /translation="MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETL
                     KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSK
                     KEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKD
                     NNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG"
     gene            1036..4629
                     /gene="evgS"
                     /locus_tag="RHX79_003669"
     CDS             1036..4629
                     /gene="evgS"
                     /locus_tag="RHX79_003669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system histidine kinase EvgS"
                     /protein_id="HDV2198789.1"
                     /translation="MKFLPYFFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPVRL
                     SNKELRWLASKKNLVIAVHKSQTATLLHTDSQQQVRGINADYLNLLKRALNIKLTLRE
                     YADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDSMRPLT
                     SPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSS
                     MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWL
                     DTGNLAFLNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNI
                     ITLQTGLNFSPITVSHNIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVF
                     VMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELD
                     ALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPP
                     SEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKV
                     IQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENS
                     DSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAVYI
                     CGWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGS
                     GLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHS
                     FGAIAASKSIALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLV
                     HIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNM
                     QGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEHPITLPEKLSILIADDHPTNRL
                     LLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSS
                     LPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDI
                     EALKNNTANDLQLMQEILMTFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANIL
                     NLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND"
     gene            complement(4685..5830)
                     /gene="yfdE"
                     /locus_tag="RHX79_003670"
     CDS             complement(4685..5830)
                     /gene="yfdE"
                     /locus_tag="RHX79_003670"
                     /EC_number="2.8.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA:oxalate CoA-transferase"
                     /protein_id="HDV2198790.1"
                     /translation="MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPP
                     GHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFR
                     PGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYP
                     DAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMA
                     YIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPR
                     FSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQA
                     RNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS"
     gene            complement(5904..6848)
                     /gene="yfdV"
                     /locus_tag="RHX79_003671"
     CDS             complement(5904..6848)
                     /gene="yfdV"
                     /locus_tag="RHX79_003671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter YfdV"
                     /protein_id="HDV2198791.1"
                     /translation="MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYA
                     LPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCAL
                     IAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKK
                     NSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLT
                     LAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGII
                     IASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS"
     gene            complement(6918..8612)
                     /gene="oxc"
                     /locus_tag="RHX79_003672"
     CDS             complement(6918..8612)
                     /gene="oxc"
                     /locus_tag="RHX79_003672"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HDV2198792.1"
                     /translation="MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE
                     GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMI
                     SGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPG
                     GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIIL
                     GKGAAYSQADEQLREFIESTQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVML
                     VGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELK
                     QNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLV
                     NEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAF
                     GFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDA
                     FRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN"
     gene            complement(8666..9916)
                     /gene="frc"
                     /locus_tag="RHX79_003673"
     CDS             complement(8666..9916)
                     /gene="frc"
                     /locus_tag="RHX79_003673"
                     /EC_number="2.8.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyl-CoA transferase"
                     /protein_id="HDV2198793.1"
                     /translation="MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDV
                     TRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAI
                     DHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP
                     LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRL
                     DKLGYLEEYPQYPNGTFGDAVPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQN
                     WENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIP
                     CAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEH
                     TAAVLQELGYSDDEIAAMKQNHAI"
     gene            complement(10429..11061)
                     /locus_tag="RHX79_003674"
     CDS             complement(10429..11061)
                     /locus_tag="RHX79_003674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdX family protein"
                     /protein_id="HDV2198794.1"
                     /translation="MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAA
                     AERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKT
                     NLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
                     NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN"
BASE COUNT         3304 a         2517 c         2306 g         3116 t
ORIGIN      
        1 ctattatctc tcatttctca tagatgaaat ttatgaattg aatgaaaaga gcattcattc
       61 ttcatatcaa acacagtgca tgtgttgcac attatcccag gaacgttgga ggcctaattt
      121 aaatgaggtg caaaaaaaac aacagaggac taaaccgtgg cttttgcaat acaattctta
      181 cgcctgtagg attagtaaga agacttatag tgccaacttg aaactataaa tcatcggtac
      241 aatccctgat tttattgttg acatttcatt tatgccgact atttatatgg tatacttgtc
      301 gaattatctt aaaggaagct cagattttct tatttttatt gagaaaatga gatgacgcct
      361 tatgtctgta ttactacagg gagaagggag atgcttcatt gcaaagggaa taatctatga
      421 acgcaataat tattgatgac catcctcttg ctatcgcagc aattcgtaat ttattgatca
      481 aaaacgatat tgaaatctta gcggagttga ctgaaggggg aagcgccgtt cagcgggtgg
      541 aaacacttaa gcctgatatc gtcatcattg atgtcgatat ccccggagtt aacggtatcc
      601 aggtgttaga aacgctgagg aagcgccaat atagcggaat tattattatt gtctccgcta
      661 aaaatgacca tttttacggg aaacattgtg ctgatgctgg cgctaatgga ttcgtgagta
      721 aaaaagaagg catgaacaat atcattgcgg ctattgaagc tgcaaaaaat ggctactgct
      781 atttcccctt ctctctcaac cggtttgttg gaagtttaac gtccgaccag caaaaactcg
      841 actccttatc gaaacaagaa attagtgtca tgcggtatat tcttgatggc aaggataata
      901 atgacattgc tgaaaaaatg ttcatcagca acaaaactgt cagcacttat aaaagtcgcc
      961 tgatggaaaa attagaatgt aaatcactga tggatcttta cacattcgcg caacgtaaca
     1021 aaatcggcta atcacatgaa gtttttaccc tatttttttc ttctctgttg tggtctttgg
     1081 tcgaccataa gtttcgcaga cgaagattac atcgaatatc gtggcatcag tagtaacaac
     1141 cgtgtcacac ttgatccagt acgtctgagc aacaaggaat tacgttggtt agcgagcaaa
     1201 aaaaatcttg tgattgcagt acacaagtcc caaacggcta ccttgttgca taccgattcg
     1261 cagcaacagg ttcgtggtat taatgctgat tatttaaatc ttttaaaaag agcgttaaat
     1321 atcaaattaa cactccggga atacgcagat catcaaaaag caatggacgc gcttgcagaa
     1381 ggtgaagtcg atatagtgtt atcacattta gttacttcgc cgcctcttaa taatgacatt
     1441 gctgcaacca aaccattgat aattaccttt ccggcgctgg taaccaccct tcacgactca
     1501 atgcgaccgc ttacctcacc aaaaccagta aatattgctc gggtagcaaa ttacccccca
     1561 gacgaggtaa ttcatcaatc atttccaaaa gcaacaatta tctcttttac aaatttatat
     1621 caggcattag catccgtctc agctgggcac aatgattact ttattggtag taacatcatt
     1681 accagcagta tgatttcccg ctatttcact cactccttaa atgtagtgaa atattataac
     1741 tcgccgcgtc aatataattt tttcttgacc agaaaagaat ctgtcattct taatgaagta
     1801 ctcaatagat ttgttgatgc tttaacaaat gaagttcgct atgaagtatc acaaaattgg
     1861 cttgatacag gaaacctggc ctttctgaac aaaccattag aactcactga acatgaaaaa
     1921 cagtggatta agcagcatcc caatttaaag gtgctggaaa atccttactc gcccccctat
     1981 tctatgacgg atgaaaatgg ctcggttcgg ggcgttatgg gggacattct taatattatt
     2041 accttgcaaa caggtttaaa tttttctccg atcaccgttt cacacaatat ccatgctgga
     2101 acacagctta gccccggagg atgggatata atacctggcg ctatttatag tgaagatcga
     2161 gaaaataatg ttttatttgc tgaagccttc ataacaacgc cttacgtttt tgtcatgcaa
     2221 aaagcgcctg acagtgaaca aacattaaaa aaaggaatga aagttgccat tccatattat
     2281 tatgagctgc attcgcaatt aaaagagatg tatccggagg ttgaatggat acaggtcgat
     2341 aatgccagcg ctgcatttca caaggttaag gaaggtgaac ttgatgctct ggtcgcgaca
     2401 cagttaaatt cgcgttacat gatcgatcat tactatccta atgaacttta tcattttctt
     2461 attcctggcg ttccgaatgc atcgctttcg ttcgcttttc ctcgcggaga accggaactt
     2521 aaggatatta ttaataaagc actgaatgca attcccccaa gcgaagttct gcgcctgacg
     2581 gaaaaatgga ttaaaatgcc caatgtgacc attgacacat gggacctata tagcgagcaa
     2641 ttttatattg ttacgacatt atccgtttta ttagttggca gtagcctttt atggggattc
     2701 tacctgttac gctcagttcg tcgtcgtaaa gtcattcagg gtgatttaga aaaccaaata
     2761 tcattccgaa aagcactctc ggattcctta ccgaatccaa cttatgttgt aaactggcaa
     2821 ggtaatgtca ttagtcataa tagtgctttt gaacattatt tcactgcgga ttactacaaa
     2881 aatgcaatgt taccattaga aaacagtgac tcacccttta aagatgtttt ttctaatgcg
     2941 catgaagtca cagcagaaac gaaagaaaat cgaacaatat acacacaggt atttgaaatt
     3001 gataatggca tcgagaaaag atgcattaat cactggcata cattatgcaa tcttcctgca
     3061 agtgacaatg cagtatatat ttgtggttgg caagatatta ctgaaacgcg tgatctaatt
     3121 aatgcactcg aggtagaaaa aaataaagcg ataaaggcta ccgtagcaaa aagtcagttt
     3181 ctggcaacga tgagtcacga aataagaaca ccaataagct ctattatggg cttcctggaa
     3241 cttctgtcgg gttctggtct tagcaaggag caacgggtgg aggcgatttc acttgcctac
     3301 gccaccggac aatcactcct cggcttaatt ggtgaaatcc ttgatgtcga caaaattgaa
     3361 tcgggtaact atcaacttca accacaatgg gtcgatatcc ctactttagt ccagaacact
     3421 tgtcactctt tcggtgcgat tgctgcaagc aaatccatcg cattaagttg cagcagtaca
     3481 tttcctgatc attacctggt taagatcgat cctcaggcgt ttaagcaggt cttatcaaat
     3541 ttactgagca atgctctcaa atttaccacc gagggggcag taaaaattac gacctccctg
     3601 gttcacattg atgacaacca cgctgttatc aaaatgacga ttatggattc tggaagtgga
     3661 ttatcgcagg aagaacaaca acaactcttt aaacgctaca gccaaacaag tgcaggtcgc
     3721 cagcaaacag gatctggctt aggcttaatg atctgcaaag aattaattaa aaatatgcag
     3781 ggcgatttgt cattagaaag tcatccaggc ataggaacaa catttacgat cacaatcccg
     3841 gtagaaatta gccagcaagt ggcgactgtc gaggcaaaag cagaacaccc catcacacta
     3901 cctgaaaagt tgagcatatt aatcgcggat gatcatccga ccaacaggct attactcaaa
     3961 cgccagctaa atctattagg atatgatgtt gatgaagcca ctgatggtgt gcaagcgcta
     4021 cacaaagtca gtatgcaaca ttatgatctg cttattactg acgttaatat gccgaatatg
     4081 gatggttttg agttgactcg caaactccgt gagcaaaatt cttccttacc catctggggg
     4141 cttacagcca acgcacaggc taacgaacgt gaaaaagggt taagttgcgg catgaactta
     4201 tgtttgttca aaccgttgac cctggatgta ctgaaaacac atttaagtca gttacaccag
     4261 gttgcgcata ttgcacctca gtatcgccac cttgatatcg aagccctgaa aaataatacg
     4321 gcgaacgatc tacaactgat gcaggagatt ctcatgactt tccagcatga aacgcataaa
     4381 gatctacccg ctgcgtttca agcactagaa gctggcgata acagaacttt ccatcagtgt
     4441 attcatcgca tccacggtgc ggctaacatc ctgaatttgc aaaagttgat taatattagc
     4501 catcagttag aaataacacc tgtttcagat gacagtaagc ctgaaattct tcagttgctg
     4561 aactctgtaa aagaacacat tgcagagctg gaccaggaga ttgctgtttt ctgtcagaaa
     4621 aatgactaaa tagcggctcc cacaatgttc aaatgtggga gctatttacc agcacatctt
     4681 acatttatga tgagaactcc tggcgaattt gttccccatg ctggtcgagc gttgccgctc
     4741 ccggcataac atgcgggtcc gcgcagccgc tgatttttat cggattaccc ggcatcatta
     4801 ttcccccggc ttcaatcaac atatttctcg cctgagtttg tggcaattta atggcctcag
     4861 ccacacttaa taacggcgcg acgggtacac caacttcatg tattctggct aaccaaactt
     4921 cagctgcctg cgtttttaac gtccgctcaa tatattgttt aagaatagcc tggttttgta
     4981 cgcgtaaaat attgctgcta aatcggggat cattaaccag ttccgtaagc tccagtgcct
     5041 ggcataacgc agaaaaaagc ttgtcattac cacaacaaat cgtaatcggc ttatcctgag
     5101 tattgaaaac atcaaaaggt gccatgtagg gatggcgatt tcccagacgt tgtggtgact
     5161 tccctgtcgc gatatatgcc atcagaccat gctccagaaa actcagcgtg gcatcaaaca
     5221 tcgctatatc gacatgcgcc cctctctggc tcttttcgcg gccataaagt gcactcacta
     5281 ttccgctgaa taaatagaca ccgccgcata gatccgcaag agatgtacca acgcgcactg
     5341 gcggagcatc aggatatcct gtttccatca ttatcccgct cattgcctga atgatggtat
     5401 cgtaggcagg agcatctttt agcggaccgg tatgtccgaa acctgacgat gaagcatata
     5461 tgaggcgcgg gttgatttct tgaagcgttt cccatgaaaa ccccagtttt tccattgtac
     5521 ctgggcgaaa attctcagct aatacatcag cttgtttgag catatttata aatatacttt
     5581 tatcgtgatc attctttaaa tcaagaacca cactctcttt gccatgatta ataaaactgt
     5641 aatagagtga ctgtccatcc acatagggac caaatgtgcg ggtatcatca ccatgacccg
     5701 gcggctcaac tttaattacc cttgcgccca tattacaaag aagttgagtt ccgaaaggtc
     5761 cattaaggac atgtgtcata tcgataacta ataagccttc aaacggccct ttgctttcat
     5821 tatttgtcat ttgcttatgc cttgaaaaaa gccgaaggtg aaaagacact tcggcattta
     5881 tgtaaaatca ataacatgat taattatgaa accagtcgac tgacataaat ccacaaggga
     5941 gccgtgacga caaaacccag tacgctcaca gccaatgacg ctgtaccagt gcgggtgtag
     6001 acattaaacc ggctggcaat aatgattccg gagaatgccg gcggtaatgc gcctgccagt
     6061 accatcatct gcaaatgttc gctgttcaaa tgacatgcca taccaacgag aagcagcgcc
     6121 agtggcatca gaatcagctt caggaaggtg ttataagcaa tttcggcact gaactcgaat
     6181 ttatgtgcag ccagagtcaa ccccgcagcg aataccgcta cccctgagtt agccttcgca
     6241 atcagattaa aggttgggtc ccatgctgcc ggaattttta ccccaaccaa caccaggatc
     6301 gttgccagaa caggtgccca tacaactggc tcctttgccg cagaaattaa tgcgctcaga
     6361 ttactattct tcttaccatc cgctcctgag gaaggattca gcaaatacag accaatagga
     6421 atagtaattg cgttaacaat aatagaaata attgctacca ctaaacctgt tgatacggaa
     6481 tcaccataaa taggatcgag aactgcaaac cccaggaatc caatggtagg tgaacccgca
     6541 attaatgcac atacagctgc ttctgcatgg gtacgtttaa aaaatttgta gcaaccaaac
     6601 caggagaaaa agaaacatcc gacaataacc acaagtgata caagggtcag acgagtgtcc
     6661 gcaaaaatca tttccctgtt tgcccgggta atagaaacaa atagagccgc aggaagagcg
     6721 tagtttaata ccagtttatt aaatgcgcgg gcttgatctt ctgaaaaagt ttctcgtctg
     6781 ccgctaaaat aacccaacag catgattacg ataataggca ataaatcgcc aataaaaaat
     6841 gttagcataa tagtatttcc gataagggtc ccctcaccat cgcataatga gttggcaaga
     6901 ggagacgatg tcagtattta attaccagcg acttgttttg ggttaagttt ggtaatatgg
     6961 ccactttcag ttcctgctgc agggtcgatg accacattaa taatggtcgg tttgcgcgac
     7021 tgaataccgg tggttaaagc atgacgaagt tcatctgtcg tggtgacgtt atagccaacg
     7081 ccacgaaacg catccattaa tttgtcatac cttgcatggt gcaacagatc cgttggtgat
     7141 ggtgcaccag cgccactgag atcaacaccg tctcctctgt agatgccgcc attattaaaa
     7201 ataacgatcg tcaccggcag gttatatcga caaatcgttt caatttccat cccactgaaa
     7261 ccaaaagcac tatcaccttc aatggcgaca accggagaac cagaagtcac gctagcaccg
     7321 atggcatagc ccataccgat gcccatgaca ccccaggtac cacaatccag acgacgacgt
     7381 ggtttataca tatcaataat atttcgtgca ttatccaggg tatttgcacc ttcattaact
     7441 aaataaatat cctggttctc gcgcaatacg tcgcgcacag cacttaatgc attaaagtaa
     7501 tttaatggtt gagtatctgt acttaatttt tcatgcattt tttgtgcatt ttgctgcttg
     7561 tggatattta aaatatcgcg ccataccagt ggagtcgtaa atgtgttttg tttcagttct
     7621 gccagcatac cttgcatact ggatgcaata tcaccaacga ctggcacagc aatggggcgg
     7681 ttgctgtcaa tttcctgcgg ttcaatatcc agttgaataa actgtgtatc tgccgcccat
     7741 ccttttttac cgtgtgccaa taaccaattc agtcgtgcac caacaagcat gacaacgtca
     7801 gcatttgcca gggcaaacga acgcgcagct gccgcagaaa gtggatgcgt atcttcaagg
     7861 atccctttcg ccatagacat tggcaggaat ggaatctgag tactttcaat aaattcacga
     7921 agctgttcat cagcttgtga atacgccgcg cctttgccaa ggataattaa tggccgttca
     7981 gcttttgcta aaagcgaaat tgcgctagtg actgacttcg ggcatggcaa taatgctggc
     8041 gacggatttt caactttaac aatcgtggtt aacgcttcgt ctttttccat cgtcgcggcc
     8101 aggacatttg ctggcaaatc aagataaact ccgccagggc gacccgatac agagacccgg
     8161 atagcgcgtg ccaatgcaat gccaagatcc tgcggctgat taacgcgaaa tgctgctttg
     8221 gcatacggtt ttgccgcatt catttggtcc agctcttcat aatcaccttg ctgtaggtcg
     8281 acgatcgcgc ggtcgctgga gccgctaatc atgatcatcg gaaaaccatt taccgttgcg
     8341 ttggccaatg cggtcaaacc attgaggaat cctggcgcag aaactgtcag gcagatcccc
     8401 ggtttttggg taagaaaacc gcttgccgca gcggcatagc ctgccgactg ctcatgacga
     8461 aaaccaatat aacgaatgcc ttccgcctgg gcatggcgtg ccatatccgt cacaggaata
     8521 cctacaacac cataaatagt gtcaatatta ttctgtttta atgcttcaac gatgatatgc
     8581 ataccatctg tcatttgaag ttgatctgac atgattaata acctcgaaat ttttataaat
     8641 tgggagccag aagcccccgt taatatcaga tggcgtggtt ttgcttcatt gcagcaattt
     8701 catcgtcgct ataacctagc tcctgcaata cagcagcggt atgttcacct aatagcggcg
     8761 cagctttaat atccggcgta aaggcagaga atttcattgg acaaccaacg gtcagatatt
     8821 ttccacgcaa cggttgttcc acttcaacaa cactgccact ttggcgcaaa gagggatcaa
     8881 gtgaaatttc tttcatactt aaaaccggtg cacaaggaat atcaaactga gtcaaatagg
     8941 ccaccgcttc atgtttatca atagtgacag tgtatttttc gatttcagca aaaatatcga
     9001 aaatatgtgg ctgtcgtgca tgggctgtac tgtatgccgg atcggtaatc cattctggtt
     9061 tgccgatggc tttacaggtg ttttcccagt tttgctcctg aatagtgaaa taaatatagg
     9121 cgttaggatc ggtttcccag cctttacatt tcaggatcca gccaggctga ccgccaccac
     9181 ctgcattacc accgcgggga actgcatcac caaatgtacc attcggatac tgcgggtatt
     9241 cttccagata acccaattta tcgagacgct gctggtcacg taatttcacg cggcaaaggt
     9301 tcaatacggc atcctgcatt gacatggtga ctcgttgccc acgccccgtt ttttcgcgat
     9361 gcagcaaagc agcaagtaaa ccgatcagca aatgcattcc ggtgttgctg tcacccaacg
     9421 ctgcagcgct taccagcggc ggaccatccc aaaaacccgt agtggatgcc gcgccacccg
     9481 ctgcctgagc aacgttttca taggctttta cattcacata aggcgaacac tcatcaaacc
     9541 ctttgatcga accaaaaatc agacgtggat tgatttcttg aatatgctcc caggtgaagc
     9601 ccatgtgatc aatggcccct ggatgaaagt tctcgactaa gatatcagct tcgcggatca
     9661 gcttttccat tacctctttg ccttccgctg ttttggtatt taactcaata gaacgtttgt
     9721 tactgttaag catggtgaag taaagcgcat cgatatcagg aatatctcgc agctggtgac
     9781 gcgttacgtc accaacgccg ggacgttcaa ttttaataac gtcagcgcca aaccaggcca
     9841 gcatttgagt acaagatggg ccagattgca caccggtgaa atcgagaact ttaattcctt
     9901 gaagtggagt tgacatagca atacctatta gttaattaaa tatgtgttaa tttagcgttt
     9961 atttaaggcg taatatcttc tataaataac ccgcaaaata tcgtcgtagc tgcactcgat
    10021 atttttaaaa tcctgtatca agtgctgaaa atcatttcat cgccacttcc aattcctttc
    10081 tgcatggtaa gtagtgagga cgaaaagaag aatatgataa atattgattc gtggtaatca
    10141 gagagagtcg cgacatttgt gatgttattc ttacaactgt aagaagcgcc ggtgatttac
    10201 aagtaagggt atgattacgc tttttaaagc gtaccataaa acataacata ataaatgatt
    10261 tgtgatgaca cgggattatt gggatttact ttgaggaaga taaaatgcgt gtttatagaa
    10321 ccgcgagcgc caaataattt tatgaccaca acctgtcgta ttgtggtcat aaaaaattgt
    10381 cggctggagg gagttaaatc ctttacctca atatactgcc tgtcagcatt agttcacaaa
    10441 cagtgcttcg ctgtcgacga tgattccatc ttccgcacct ttaagcgcca ggtttgcctc
    10501 gtagtattgc tttttatcaa gcagtttctg cgcatcagca agtgcattac gagtctgttt
    10561 aagcggcatc agatattggt tttccattac gccaacaccg gccaggcgaa gctcttccat
    10621 tgcgcccttt ttatcccctt tcgccatttt ttcattggca atttttatcg cggcttcttt
    10681 ttcgggtgtt gctacataac tctcagaaat tccgacagat gcattaatga caatatattg
    10741 gtcatcattg agattggtct ttttacctgg cttagcgaac tttgcccatt cggtactgtc
    10801 atctgacaac aaagctgaag cttcattggt cagttctttt gccttttccg gatcgccatg
    10861 aaacagagcc aggcgcgcta cctgcacgtc acgcatcgca tataaacctt gttcagagat
    10921 acgctctgct gctgccgttt tctgggtttg ctgaacttgc tgagtttgct gttgtgccgc
    10981 taccggtgca ttatcagcag cccatacagt tgaagatgcc agaattgctg tgaccatcgt
    11041 agccataatt aaacgtttca tacttacctc attctttaac agttttagaa aacgccgcca
    11101 tcatattggg tgagcatgaa atgagaaatc agagagcaac ggtcattttg aaagggttat
    11161 cttacagttg tagttattat cgcaagaagt attttagtct tacaattgta ggaatctgct
    11221 tcctgtcgca gagaactatt ctt
//
LOCUS       DAPGWB010000144        11225 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.146, whole genome shotgun sequence.
ACCESSION   DAPGWB010000144 DAPGWB010000000
VERSION     DAPGWB010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11225
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.146"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(63..1892)
                     /gene="glmS"
                     /locus_tag="RHX79_003675"
     CDS             complement(63..1892)
                     /gene="glmS"
                     /locus_tag="RHX79_003675"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDV2198795.1"
                     /translation="MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMT
                     RLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVSEHIVVVHNGII
                     ENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTV
                     IMDTRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRR
                     SVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQ
                     VDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYR
                     KSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMT
                     NAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLS
                     QDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPL
                     ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMP
                     HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE"
     gene            complement(2054..3424)
                     /gene="glmU"
                     /locus_tag="RHX79_003676"
     CDS             complement(2054..3424)
                     /gene="glmU"
                     /locus_tag="RHX79_003676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDV2198796.1"
                     /translation="MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAAN
                     ELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILML
                     YGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATD
                     EQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQ
                     RLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLAHGRDIEIDT
                     NVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTIVEDANLAAACTIGPFARLRP
                     GAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANK
                     FKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWR
                     RPVKKK"
     gene            complement(3775..4194)
                     /gene="atpC"
                     /locus_tag="RHX79_003677"
     CDS             complement(3775..4194)
                     /gene="atpC"
                     /locus_tag="RHX79_003677"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDV2198797.1"
                     /translation="MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLT
                     AIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKA
                     EEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM"
     gene            complement(4215..5597)
                     /gene="atpD"
                     /locus_tag="RHX79_003678"
     CDS             complement(4215..5597)
                     /gene="atpD"
                     /locus_tag="RHX79_003678"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017800291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDV2198798.1"
                     /translation="MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQ
                     QQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEI
                     GEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNM
                     MELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL
                     RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM
                     GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPA
                     VDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVA
                     RARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSI
                     EEAVEKAKKL"
     gene            complement(5624..6487)
                     /gene="atpG"
                     /locus_tag="RHX79_003679"
     CDS             complement(5624..6487)
                     /gene="atpG"
                     /locus_tag="RHX79_003679"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDV2198799.1"
                     /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRP
                     YAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAE
                     MKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY
                     DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDT
                     LLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQE
                     LTEIVSGAAAV"
     gene            complement(6538..8079)
                     /gene="atpA"
                     /locus_tag="RHX79_003680"
     CDS             complement(6538..8079)
                     /gene="atpA"
                     /locus_tag="RHX79_003680"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDV2198800.1"
                     /translation="MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGL
                     ADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRG
                     LLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGAL
                     ANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGG
                     IRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFA
                     AERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFK
                     ATQSW"
     gene            complement(8092..8625)
                     /gene="atpH"
                     /locus_tag="RHX79_003681"
     CDS             complement(8092..8625)
                     /gene="atpH"
                     /locus_tag="RHX79_003681"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDV2198801.1"
                     /translation="MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQM
                     AELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAV
                     SEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
                     DGSVRGRLERLADVLQS"
     gene            complement(8640..9110)
                     /gene="atpF"
                     /locus_tag="RHX79_003682"
     CDS             complement(8640..9110)
                     /gene="atpF"
                     /locus_tag="RHX79_003682"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001052215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDV2198802.1"
                     /translation="MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGL
                     ASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIV
                     AQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL"
     gene            complement(9172..9411)
                     /gene="atpE"
                     /locus_tag="RHX79_003683"
     CDS             complement(9172..9411)
                     /gene="atpE"
                     /locus_tag="RHX79_003683"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004246596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDV2198803.1"
                     /translation="MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD
                     LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA"
     gene            complement(9458..10273)
                     /gene="atpB"
                     /locus_tag="RHX79_003684"
     CDS             complement(9458..10273)
                     /gene="atpB"
                     /locus_tag="RHX79_003684"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDV2198804.1"
                     /translation="MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINID
                     SMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIA
                     PLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFIL
                     ILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAG
                     ELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH"
     gene            complement(10282..10662)
                     /gene="atpI"
                     /locus_tag="RHX79_003685"
     CDS             complement(10282..10662)
                     /gene="atpI"
                     /locus_tag="RHX79_003685"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418195.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HDV2198805.1"
                     /translation="MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGG
                     LAVFLPNVLFMIFAWRHQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFL
                     PLIVTWVLVLVVQILAPAVINNKG"
BASE COUNT         2694 a         3039 c         2770 g         2722 t
ORIGIN      
        1 tattgatgtc agttataaaa aagggccacc ggtcggcagc ccttttttat ctatgatagt
       61 gattactcaa ccgtaaccga ttttgccagg ttacgcggct ggtcaacgtc ggtgcctttg
      121 atcagcgcga catggtaagc cagcagctgc agcggaacgg tgtagaagat cggtgcaatc
      181 acctcttcca catgcggcat ctcgatgatg tgcatgttat cgctacttac aaaacccgca
      241 tcctgatcgg cgaagacata caactgaccg ccacgcgcgc gaacttcttc aatgttggat
      301 ttcagttttt ccaacagttc gttgttcggt gcaacgacga taaccggcat atccgcgtca
      361 atcagcgcca gcgggccgtg tttcagctcg cctgcagcgt aggcttcagc gtgaatgtaa
      421 gagatctctt tcagcttcaa tgcgccttcc agcgcgattg ggtactgatc gccacggccc
      481 aggaacagcg cgtgatgttt gtcagagaaa tcttctgcca gagcttcaat gcgtttgtcc
      541 tgagacagca tctgctcaat acggctcggc agcgcctgca gaccatgcac aatgtcatgt
      601 tcaatggagg catccagacc tttcaggcga gacagcttcg ccaccagcat caacagcaca
      661 gttaactgag tggtgaatgc tttggtggag gccacaccaa tttccgtacc cgcgttggtc
      721 atcagcgcca gatcggattc gcgcaccaga gaagaacccg gaacgttaca gattgccagc
      781 gaaccaaggt aacccagctc tttcgacaga cgcaggcccg ccagggtatc cgcggtttcg
      841 ccagactgtg acaaggtgat catcaggctg ttacgacgca cggcagattt gcgatagcgg
      901 aattcagagg cgatttcgac gtcgcacgga atacctgcca gcgattcaaa ccagtagcgg
      961 gaaaccatac cggagttata agaagtacca caggcgagga tctgaatatg ctcaaccttc
     1021 gacagcagtt cgtcggcgtt cggtcccagc tcgcttaaat caacctgacc gtggctgatg
     1081 cgcccggtaa gggtgttttt gatcgcgttt ggctgttcgt agatctcttt ctgcatgtag
     1141 tgacggtaaa tacctttatc gcccgcgtca tattgcagat tggattcaat atcctgacgt
     1201 tttacttccg cgccagtttt atcgaagatg tttaccgaac ggcgagtaat ttccgcaatg
     1261 tcgccctctt caaggaagat aaagcgacgg gtcaccggca gcagcgccag ctggtcagaa
     1321 gcgataaagt tttcgcccat acccaggcca atcaccagcg ggctaccaga acgtgctgcc
     1381 agcagggtat ccgggtgacg ggtatccata attaccgtgc cataagcgcc acgcagctgt
     1441 ggaatagcac gcagaacagc ttcacgcaga gtgccgccct gtttcagttc ccagttcacc
     1501 agatgtgcaa tcacttcggt gtcggtttca gaaacgaagg tatagccacg cgcttttaac
     1561 tcttcgcgca gcggttcatg gttttcgatg atgccgttat gcaccaccac aatgtgttca
     1621 gaaacatgcg gatgcgcatt cacttctgaa ggttcaccgt gtgtcgccca gcgagtatga
     1681 gcaatacccg taccgccatg cagaggatgt tcttccgctg cctgagccag catctggact
     1741 ttaccgaggc gacgcaggcg ggtcatatga ccttctgcat caacaacggc cagaccggca
     1801 gagtcatatc cgcggtattc cagacgacgt aaaccttcaa gaaggatttc tgctacatca
     1861 cgttgcgcga tcgcgccaac aattccacac atagtttttg attccgattt atatcgttgt
     1921 cggtcaacct gtatgcccgt tttttcgggc gccccgagcc ttgtagagag tggggttatt
     1981 tttatagtta ctgcttgtgg gagggagatt atgttatctc ctcatcccat gtgaccggat
     2041 tacccggcca gaatcacttt ttctttaccg gacgacgcca gccttctttc tgagtctgcg
     2101 gcacacggct gatagctaat gcattttcgc cgacattacg cgtcacagta gtacccgcag
     2161 caatggtcgc gcctttgcct actgttaccg gggccaccag ctgagtatcg gaaccgacaa
     2221 acacatcgtc gccgataatg gtcttaaatt tattcgcacc atcgtagttg caggtaatgg
     2281 ttcccgcgcc gatgttaacg ttatcgccaa tttccgcatc gccaaggtaa gtcagatgac
     2341 cagctttcga gcctttaccc agacgcgctt ttttcatctc aacgaagtta ccgacgtgtg
     2401 ctccttccag caactcagct ccaggacgca gacgagcaaa cgggccaatg gtacaggccg
     2461 ccgccagatt cgcgtcttcc acgatggtat atgggctaat ttcgcaatca tcgccaatca
     2521 cgctgttttt aatcacgcaa ccggtgccga ttttcacgcg atgaccgaga gtcacgttgc
     2581 cctcgatgat aacgttagta tcaatttcaa tatcgcgccc gtgagcaagc gtaccgcgca
     2641 gatcaaaacg cgccggatcg cgcagcataa cgcctgctaa cagcagtttt tcagcctgtt
     2701 cggactggta aacgcgctcc agacgggaga gttgcaggcg gttattcacg ccttctactt
     2761 cgcttaaacg ttgcggatga acggcgacga tttcacgccc ttcctgatac gccagcgcaa
     2821 taatgtcggt gatgtagtat tcgccctgag cattattgtt ggtcagcttc gccagccagc
     2881 gtttcatatc tgcgccgtta gcgatcagaa tgccggtgtt gatctcctga atctgacgct
     2941 gctcgtcggt ggcatctttg tgctcaacaa tgccggtaac tttgccgttt tcacgggtga
     3001 tacgtccata accggtcgga tcatccagtt tcaccgtcag cagaccaatg ccaccctggg
     3061 gtttagcatc acgcaggcgc tggagtgttt cgacagagat cagcggcacg tcgccgtaga
     3121 gcattaaaat gtcttcatca tcggcaaaga aaggtgcggc ctgctgcatt gcatgaccag
     3181 tacccagctg ctctgcctga agcacccagt taagattgtc gtctttcagc gcctgtttaa
     3241 gcagatcgcc gccgtgaccg tacaccaggt gaacatgcgc tgcgcctaat tcattcgcag
     3301 catcaatgac atgctgaacc atcgctttcc cggcaagggt atgcagcact ttcggaagat
     3361 cggaatacat gcgcgtgcct ttgcctgcgg caaggatcac tacgctcata gcattattca
     3421 acatacgcgt cctgactgta atttgagaac gaatttaaac cgcttcacct tgaaaaaact
     3481 acattttttt catcgtgaaa tggacagagg ataaattgtt caataacgga ttatccccgc
     3541 tgacgaaagt gccattttcg accatcgtca cgccttttgt ctgcagaaaa ttaaggcagt
     3601 accttcattt aagcgtcagg tggatgtttt tgctcttatt tcgatcaatg aataaacggg
     3661 aaaacagggg tgttttatat cagcaggatc tatgtgaacg ctcttcagga cggatcacgc
     3721 gtaaaaaaaa gccagcctgt ttccagactg gcttttgtgc ttttcaagcc ggtgttacat
     3781 cgcttttttg gtcaactcga taacgcgcag ctgcgcgatc gctttggcca gttccgcaga
     3841 cgcctgagcg taatctacgt cgccgtgaga gctgctaatg tgctcttcag ccttacgttt
     3901 cgcttccatg gctcgcgctt cgtcgagatc ctggccgcga attgcggtgt cggccagaac
     3961 ggtcacgttg ccaggctgca cttcaagaat gccgccagac agatagataa actcttcgtg
     4021 accgtgctgt ttcacgatgc gaatcatacc aggcttaatg gcggtgagca gcggtgcgtg
     4081 gccagggtag atccccagtt caccttcgct acccgttacc tggattttct cgaccagacc
     4141 agagaacatt tgttgctctg cgctgacgac gtccaggtgg taagtcattg ccatatcacc
     4201 ctccgattaa ggcgttaaag ttttttggct ttttccacag cttcttcgat ggaaccgacc
     4261 atgtagaacg cctgctccgg caggtgatcg tattcgcctt ccatgatgcc tttaaagcca
     4321 cggatggtgt ctttcaggga gacgtattta cccggagaac cggtgaatac ttctgccacg
     4381 aagaacggct gggacaggaa gcgctggatc ttacgagcac gcgctaccac cagtttgtct
     4441 tcttcagaca gttcatccat acccaggatg gcgatgatgt ctttcagttc ctgataacgt
     4501 tgcaggatgg actgaacgcc acgcgcggtg tcgtagtgtt cctgaccaac caccagcggg
     4561 tccagctgac ggctggtgga gtccagcggg tcaacggccg ggtagatacc cagagacgcg
     4621 atctgacggc tcagtaccac ggttgcgtca aggtgcgcaa aggtggttgc cggagacggg
     4681 tcagtcaagt catccgcagg tacgtatacc gcctgtacgg aggtgataga accagttttg
     4741 gtggaggtga tacgttcctg cagaacgccc atctcttccg ccagggtcgg ctgataacct
     4801 accgctgaag gcatacggcc cagcagtgcg gatacttccg taccggccag ggtgtaacga
     4861 tagatgttgt caacgaacag cagaacgtca cgaccttcgt cacggaattt ctcagccatg
     4921 gtcagaccgg tcagagcaac gcgcagacgg tttcccggcg gctcgttcat ctggccatac
     4981 accagggata ctttgtcgat aacgttggag tcggtcattt cgtggtagaa gtcgttaccc
     5041 tcacgagtac gttcacctac gcccgcaaac acagagtaac cggagtgctc gatcgcgatg
     5101 ttacgaatga gctccatcat gtttacggtt ttacctacac ccgcaccacc gaacagacca
     5161 actttaccgc ccttagcgaa cggacacatc aggtcgataa ctttgatacc ggtttccagc
     5221 agttcctgag agtttgacag ctcttcgtag gaaggtgctg cgcggtgaat cgcccaacgc
     5281 tcttcttcac cgatctcgcc tttcatgtcg accggttcac ccagtacgtt catgatacgg
     5341 cccagagtcg ctttacctac cgggacttcg atcgggtgtt cgaggtcttt tacatccaga
     5401 ccgcgacgca gaccgtcgga ggaacccatt gcgatggtac gcacgatacc gccgccgagc
     5461 tgctgctgaa cttccagcac cagacgctca ttaccatttt gcacctcaag agcatcgtac
     5521 acgcgcggta cggcatcctg agggaattcg acgtcaacta cggcgccgat tacctggaca
     5581 atctttccag tagccatctt aaatcctcta cgaaataacc tgtttaaacc gcggcggccc
     5641 ccgagacgat ctcggtgagt tcctgagtaa tgctggcctg acgagctttg ttgtatacca
     5701 actgcagctc tttaatcagg ctgccgccat tgtcggtcgc ggctttcatc gccaccatac
     5761 gggcggcctg ctcgctggcc aggttttcaa ccacgccctg ataaacctga gattcgacat
     5821 aacgacgcag cagggtatcc agcaacgcct tcggatcggg ttcgtacagg taatcccagg
     5881 atttatgttt cagatcatca tcatctgatg ccggtaacgg cagcagctgg ctgatggtcg
     5941 gaacctgaga catggtgtta ataaatttgt tgctgacaat gtaaagcttg tccagacggc
     6001 cttcgtcgta ggcctgcaac atcactttta ccggaccgat cagttcggac agggaagggt
     6061 tatcccccat gccggtgacc tgggcaacaa cattgccgcc cacggagttg aagaacgaca
     6121 cgcctttcga gccgatcatt gcgaggtcgc attgaacgcc tttgtcggtc caggtcttca
     6181 tttccgccag cagttttttg aacaggttaa tgttcaaacc accgcacaaa ccacggtcgg
     6241 tcgacaccac caggtagccc acgcgtttaa cgtcgcggtc ttccaggtaa gggtgcttat
     6301 attccagatt accgtgtgca aggtgaccaa tcactttgcg catggtttct gcataaggac
     6361 ggctggccgc catgcgatcc tgcgatttac gcattttgga agcggcgacc atctccatcg
     6421 ctttagtgat cttttgcgtg ttctggacgc ttgcgatctt actacgtatc tcttttgcgc
     6481 cggccatgag cttctcctca atgccttgcg gcctgcccta aggcaagccg ccagacgtta
     6541 ccaggattgg gttgctttga aggaatcgag gatgcctttc agcttgcctt cgatttcgtc
     6601 gttgtagcca ccggtctggt tgatctcttg catcaacgga gcgtgatcac ggtcgacgta
     6661 agccagcaga gcggcttcga agctgccaat tttcgacagt tcaacatccg ccaggtaacc
     6721 acgttctgct gcgaacagaa ccagagactg ctgcgcaacg gacatcggcg catactgttt
     6781 ctgtttcagc agttcggtca ctttctgacc gtggtcaagc tgcttacgtg ttgcatcgtc
     6841 aaggtcggat gcaaactgag agaacgctgc cagttcacga tactgtgcca gagcggtacg
     6901 gataccaccg gacagttttt tcatgatctt ggtctgtgct gcaccaccaa cacgggatac
     6961 ggaaataccc gggttaaccg caggacgaat accggcgttg aacaggttgg tttccaggaa
     7021 gatctgacca tcggtaatgg agattacgtt ggtcggaacg aacgcagaaa cgtcacccgc
     7081 ctgagtttcg ataatcggca gtgcggtcag agaaccggtt ttccctttca cttcaccttt
     7141 ggtgaaggct tcaacgtatt cggcgttaac acgtgcagca cgctccagca gacgagagtg
     7201 gaggtagaaa acgtcgcccg ggaatgcttc acgtcctggc ggacgacgga gcagcaggga
     7261 gatctgacgg taagcaacag cctgtttaga caggtcatcg taaatgatca gcgcatcttc
     7321 accgcggtca cggaagtatt cgcccattgc gcaaccggca tacggtgcca ggtattgcag
     7381 tgcagcggat tcagacgcgg ttgctaccac aacgatggtg ttagccagtg cgccgtgctc
     7441 ttccagttta cgtaccacgt tagaaatggt ggacgctttc tggccgatag cgacatagat
     7501 acatttgata ccggaatcgc gctggttgat gatggcatcg atagccagtg cggttttacc
     7561 tgtctgacgg tcaccgatga tcaattcacg ctgaccacga ccgattggga tcatggagtc
     7621 aacggcttta taaccggtct gtaccggctg atctacggac tgacgttcga taacgcccgg
     7681 agcgattgct tctacagcag agaagccgtc gtgatccagc ggacctttac cgtcgattgg
     7741 tgcacccaga gtgttaacca cacggcccag caggccacgg ccaaccggaa cttccaggat
     7801 acggccagta cacttaactt tcatgccttc ggcaaggtca gcgtacggac ccataacaac
     7861 cgcacctaca gagtcgcgct cgaggttcag tgcgatagcg taacggttac ccggcaggga
     7921 gatcatttca ccctgcatac aatcggccag gccgtgaatg cggataacac cgtcacttac
     7981 agaaacaata gtaccttcgt tgtgagcttc actcacaaca ttgaactgag caatgcgctg
     8041 cttgatcagt tcgctgattt cggtggaatt cagttgcatg ctccagtccc cttaagactg
     8101 caagacgtct gcaaggcgct caagacgacc gcgtacgctg ccatcaatga ccatatcacc
     8161 cgctcggatg ataacgcctg ccattacaga cttatcgatt ttgcaattca gcttaacttt
     8221 gcgtgacaga cgtttttcca tcgcagcaga aattttcgcg agctgttgtt cactcagtgc
     8281 ggcagcggaa atgacgtcta cctcagcggt agcctcactc acggcacgaa ggtgaataaa
     8341 ctgctccaga acatccggga gcgcgttaag acgaccattt tcagccatta cccgaatcag
     8401 gttctgaccg ttttcgtcca gttgctcacc acaaactgcg ataaacgact cggcgagcgt
     8461 ttctggcgca agcgcgccag agagaagctc tgccatttgt tcgtttttgg ttacctcggc
     8521 ggcaaacgcc agcatgtcct gccagcgttc tacactttgg tgttcgacgg caaagtcaaa
     8581 agctgctttg gcgtaggggc gagctaccgt aataaattca gacatcagcc cctccctcct
     8641 tacagttcag cgacaagttt atccacgatg tcgctgttag cagcttcatc cacggaacgt
     8701 tcgatgatct tctcggcgcc agcaacagcc aggatagcaa cttgcttacg cagctcttca
     8761 cgggcacgtt tacgctcggc ttcaatttct gcctgcgcct gggccacgat tttagtacgt
     8821 tcctgttctg cctcagcttt cgcttcgtcc agaatctgcg agcggcgttt gttcgcctgc
     8881 tcgatgatta cctgggcttc cgctttcgct tttttcagct ggtcggtcgc gctggccttt
     8941 gcaaggtcaa ggtccttatg tgctcgttct gcggaagcaa ggccgtcagc aatttctttt
     9001 tgacgttttt cgatggctgc cattaatggc ggccatacgt acttcatgca gaacagaacg
     9061 aacaggacaa acgcgatggc ctggccgagg attgttgcgt taagattcac agcacaatgc
     9121 ctctatttag ttaacgttct gatattgctc tttaaataaa agcaacgctt actacgcgac
     9181 agcgaacatc acgtacagac ccagacctac agcgatcatc gggatagcat ccaccagacc
     9241 cataacgata aagaactgag tacgcagcag aggaatcaga tcaggttgac gcgctgcgcc
     9301 ttccaggaat ttacccccga ggatgccgat accgatcgca gcaccgattg ccgccagacc
     9361 catcatcaca gcggcagcca tgtacagcag atccatattc aggttttcca tgacagtctc
     9421 cagtttgttt cagttaaaac gtagtagtgt tggtaaatta atgttcttca gacgccatcg
     9481 acagatagac gatcgtcaga accatgaaga tgaaggcttg cagcgtaatg atcaggatgt
     9541 ggaaaatggc ccacggcaca ttcaggatcc actgtgacca ccacggcaac agaccagcaa
     9601 tcagaatgaa aatcagctca ccggcataca tgttaccgaa cagtcgcaaa ccaagtgaaa
     9661 ctggtttgga cagcaggctt accccttcaa ggattaagtt gacaggaatg aacgcccagt
     9721 gattgaacgg ctgcagcgtc aactctttcg tgaagccgcc gatgcctttc attttgatgc
     9781 tgtagaacag aatcaggata aatacgccca atgccataga cagcgttacg ttcacgtccg
     9841 cagacggaac cacacgcagt gcaggcagac ccagtacatg ttcagcaatg tacggcagca
     9901 ggtcgatagg cagtaaatcc atcaggttca tcaggaatac ccagacgaag atcgtcaggg
     9961 ccagcggagc aatcagcttg cttttgccat ggtacatgtc tttcacgcta ccattaacaa
    10021 agccgatcac cagctcaatc gcggtctgaa acttacctgg cacaccgctg gtcgcctttt
    10081 tggctacgct acggaataaa accaggaaca acagacccag caccaccgag aagaacatgg
    10141 agtcaatatt gattgtccag aaggtggctg gggggttttg tggatccacc agcgagaatg
    10201 tacgcaggtc cagctgaagg ttattcaggt ggtgtcctat gtaatcctgc ggcgtcatat
    10261 tttctgaagc catgatgcct tttacccttt gttgttaatt acagccggtg ccagtatctg
    10321 aaccaccagc accaaaaccc acgtaacgat cagcggcaag aataccgcct ttaaaaccgc
    10381 caacgccacc accagtaaca ccaacatcgc cagaactttg aaagcttcgc caaatgcgaa
    10441 tgtccaggcc acccggcctt tcgctggtgt atgcgcctgg tgacgccagg caaatatcat
    10501 aaacaaaacg ttaggcagaa agactgccag gcccccgctt attgcagaga cgccccagaa
    10561 ggggtctttg aggctgaaca gcaatccact tgctatcacc accagtaact gaacgagcag
    10621 aagcttccga gcaacgtttc gactcacgag cgacacagac atcacgtttt tcactcctgc
    10681 tcccttcgag gtatgccgcg tgtcgtataa aactttcttt aaggcttaga gtcaagcatc
    10741 aaaaagcggt caaattatac ggtgcgcccc cgtgatttca aacaataagt agccaaaagg
    10801 tgaataaatg tttaaatatt tttccagtgc atacaattgc gacttttctg ctaaccctgt
    10861 tcgatcatga aaaactgtaa ataacgcgta aacactggtg ataaagcgtg cttcagatca
    10921 catattgcgc atgttcgcgc acagcatatt tatttacttg gcaaatgatg cctttgcaag
    10981 tttatgatat ttcagtctaa aaacagatac tgttttaata aatgacattt acacaacaaa
    11041 aaccacccat tgacattttt aataatgttt taacagccaa tgatggttct tagcgccgat
    11101 ttttagcaga ctgatatttt cactaatgac ttattttctg cttaccaaaa aaagccacgt
    11161 tatcttgttg atgcaaaaga gtgaacgtgg cgttaaatgt aaccagttat atcagtagaa
    11221 aacct
//
LOCUS       DAPGWB010000145        11178 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.147, whole genome shotgun sequence.
ACCESSION   DAPGWB010000145 DAPGWB010000000
VERSION     DAPGWB010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11178)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11178)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11178
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.147"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            608..1018
                     /locus_tag="RHX79_003686"
     CDS             608..1018
                     /locus_tag="RHX79_003686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415090.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 family protein"
                     /protein_id="HDV2198806.1"
                     /translation="MAQVAIFKEIFDQVRKDLNCDRFYSELKRHNVSHYIYYLATGNI
                     HIVFESDNTVLIKGFHDVIHVSFCRDTRLIETYLHKLKSREITFHEYRVNLAKAGVFR
                     WVTNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR"
     gene            1243..1536
                     /locus_tag="RHX79_003687"
     CDS             1243..1536
                     /locus_tag="RHX79_003687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDV2198807.1"
                     /translation="MKKTLLTFTLALLISGCAQQTFTVENKPTTVTPKETITHHFFVS
                     GIGQKKTVDAAKICGGADKVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSQ"
     gene            complement(1619..1901)
                     /locus_tag="RHX79_003688"
                     /pseudo
     CDS             complement(1619..1901)
                     /locus_tag="RHX79_003688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000271100.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1967..2512)
                     /locus_tag="RHX79_003689"
     CDS             complement(1967..2512)
                     /locus_tag="RHX79_003689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001373039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDV2198808.1"
                     /translation="MKSRDEIFDEILGKEGGYVSHPDDTGGATKWGITEKVARAHGYR
                     GDMRDLSRGQALEILEADYWYGPRFDQVANLSPDIAAELCDTGVNMGPSVATKMLQRW
                     LNVFNQKGMLYPDIVTDGGIGPRTINALRSYLKNRGRDGELVLVKALNCTQGERYLAL
                     AEKREANESFVYGWMKERVGL"
     gene            complement(2514..2792)
                     /locus_tag="RHX79_003690"
     CDS             complement(2514..2792)
                     /locus_tag="RHX79_003690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000183782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDV2198809.1"
                     /translation="MTNNLPGLLNAALCTVIVLTLFFYRRKESRHKPLISWCAWCLML
                     LYAITPLSYLCGHPLPADWLVVMLNLVFGVMVVRARGNVSKIFAFLSG"
     gene            complement(2782..3174)
                     /locus_tag="RHX79_003691"
     CDS             complement(2782..3174)
                     /locus_tag="RHX79_003691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001406273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HDV2198810.1"
                     /translation="MSEPLSGSGTAVALGGATVFGLFTGTDFGIVFGAFAGALFVATM
                     PQTLSAWRVAAHFLVSFIVGVLGARGVAGYMAERIGFNSASVDALCAVLVSVLSVKVL
                     SFIHQQEITSLVSGLFSRQRGGGGGNDK"
     gene            complement(3260..3412)
                     /locus_tag="RHX79_003692"
     CDS             complement(3260..3412)
                     /locus_tag="RHX79_003692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000833649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3927 family protein"
                     /protein_id="HDV2198811.1"
                     /translation="MKSARLVLAAILLFLVVAVDFTGWLMSVLADGVLVAMVTVLLWP
                     LLRKSE"
     gene            complement(3409..3834)
                     /locus_tag="RHX79_003693"
     CDS             complement(3409..3834)
                     /locus_tag="RHX79_003693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007901009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite/colicin resistance protein"
                     /protein_id="HDV2198812.1"
                     /translation="MLGIFKKKTRKAITEVKKMENRDAVEATVWGAYSIAYADGTCDA
                     KEIAVLEKTIAALPAFAPFSGEIAQMSANIRARYEASPRSANAHALRELADVAGTTEA
                     VDVLCLCLDIADQDGIGPDEEAQLKKIAQALQLPLEQYL"
     gene            complement(4016..4294)
                     /locus_tag="RHX79_003694"
     CDS             complement(4016..4294)
                     /locus_tag="RHX79_003694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001017778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198813.1"
                     /translation="MNIDDISRCSSLLLRIEDVNAERARAFSRLTVIFSTPDRLSGKN
                     IVLLNSDAIHKVFDEFMAANSELLALVEEYNEIASRVGMDEFSVMLRG"
     gene            complement(4811..5896)
                     /locus_tag="RHX79_003695"
     CDS             complement(4811..5896)
                     /locus_tag="RHX79_003695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000228659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDV2198814.1"
                     /translation="MVDTVKISSCELINTDCLEFIQTLSENSVDLIVTDPPYFKVKPE
                     GWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFNVLNH
                     IIWAKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYQPKNDGYAAKERELKQHVMA
                     PLISYFRDARESLGITSKQIAEATGKKNMVSHWFGTCQWQLPNEADYRKLQALFACVA
                     EEKHQRGELATPHQQLVSTYSELNRQYASLLEEYKSLRRYFSVSAAVPYTDVWTHKPV
                     QYYPGKHPCEKPADMLRQIISASSRPGDVVADFFMGSGATIKAAMGLGRRTIGVELES
                     GRFEQTVGEILVLNDKLRNAQLDKNRS"
     gene            complement(6047..6244)
                     /locus_tag="RHX79_003696"
     CDS             complement(6047..6244)
                     /locus_tag="RHX79_003696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309806.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrmB family transcriptional regulator"
                     /protein_id="HDV2198815.1"
                     /translation="MLKQQDMTETARVVFNELSVTEPATVGEIAQNTYLSRERCQLIL
                     TQLVMAGLADYQFGCYRRLPQ"
     gene            complement(6417..7130)
                     /locus_tag="RHX79_003697"
     CDS             complement(6417..7130)
                     /locus_tag="RHX79_003697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000342735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198816.1"
                     /translation="MDDSALLRNSSLFVAYMGCLGWGSAYFYGWGTSFYYGFPWWVVG
                     AGVDDVARSLFYAVTVIVIFLIGWGVGIVFFLGIKQKRNIQNLSFIRLFLAILLLFIP
                     PVLEFSVIHQHVEPDVLIFCILAAFTITLFVRSGRRLVSVKCFSEMSFIRHHRIEFMM
                     AGFMIYFWAFSLIAGWYKPQFKREYQAIHYENVWYYIIARYDDRLVLSKSYRSGGKKF
                     VIFNSGNINDFEINTVRVR"
     gene            complement(7386..8051)
                     /locus_tag="RHX79_003698"
     CDS             complement(7386..8051)
                     /locus_tag="RHX79_003698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antiterminator"
                     /protein_id="HDV2198817.1"
                     /translation="MNNQYLQFVREQLTIATADLSGATKGQLEAWQENAMFNTGRYRR
                     KKIRYRDKVTGKIVTLDNPPIPGKQSLAKGSSIALVSPVEFSTSSWRRAVLSLEEHHK
                     AWLLWCYSGSICWEYQIAITQWAWTEFNAQSGTRKIAGKTLVRLKTLIWLAAQAVKAE
                     LFGGEGYEYQELALLVGVTTKNWSKTFTGHWVAMKHIFHRLDGEALLLVEGARSEQKA
                     AFS"
     gene            complement(8048..8407)
                     /locus_tag="RHX79_003699"
     CDS             complement(8048..8407)
                     /locus_tag="RHX79_003699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HDV2198818.1"
                     /translation="MGIEFVLPYPPTVNTYWRRRGSTYFVSKAGERYRRDVALIVRQQ
                     QLKLNLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLIDDEQFDEVNIMRGQ
                     VIPGGRLGIKITELECA"
     gene            complement(8420..9469)
                     /locus_tag="RHX79_003700"
     CDS             complement(8420..9469)
                     /locus_tag="RHX79_003700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HDV2198819.1"
                     /translation="MRVLLRPVLVPELGLVVLNPGRESMPVFYNTRVLVEPEPKNMRA
                     LPSGEVPAVRQPLAQDKSLLPFFSDERVIRAVGGAGALSDWLLRHVKSCQWPHGDYHH
                     SETVIHRYGTGAMVLCWHCDNQLREQTSDSLEQLAQQNLAAWMIDVIRHAMNGTQERE
                     LSLAELSWWAVCNQVADALPEAVLRRSLGLRVEKIHSVYRESDIVPGEQSATSILKQR
                     TKNLAPLPHVHQQQIPPQEKTVVSIAVDPESPESFMKRPKRRRWVNEKYTRWVKTQPC
                     TCCCKPADDPHHLIGHGQGGMGTKAHDIFTLPLCREHHNELHADPQAFEEKHGSQVDL
                     IFRFLDHAFATGVLG"
     gene            complement(9471..9743)
                     /locus_tag="RHX79_003701"
     CDS             complement(9471..9743)
                     /locus_tag="RHX79_003701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198820.1"
                     /translation="MAHNTKHHNSDTDLASRHGRRSHTFKSDWFQHDPCTEEQAEWLI
                     QCYRRQGYEIKKALSLDYRHWIISVRLPYSERPPRPSRTYQQRIWR"
     gene            9675..9815
                     /locus_tag="RHX79_003702"
     CDS             9675..9815
                     /locus_tag="RHX79_003702"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198821.1"
                     /translation="MRTPPVPAGKVGIRIVMFGIVRHRFSLLAQQVPVVQAGLWIVNQ
                     NT"
     gene            complement(10167..10604)
                     /locus_tag="RHX79_003703"
     CDS             complement(10167..10604)
                     /locus_tag="RHX79_003703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000284536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin"
                     /protein_id="HDV2198822.1"
                     /translation="MSIVDITTRAVNYSAIFDLKTLKRKKRLDHAFELLSEYGITLNI
                     VEDRAWTKATYDLTSGHYDPITLTISVPNHTFELACKGDREALFVLFHEIGHLVLGHR
                     ALFHSSNKPPSQIEDAEWQADLFAEVVLRELGFYMDQLSFDFL"
     gene            complement(10653..11012)
                     /locus_tag="RHX79_003704"
     CDS             complement(10653..11012)
                     /locus_tag="RHX79_003704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001219083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2198823.1"
                     /translation="MALTEFGKAVRKARIDTDCTLLTMAQELGVTSAFLSGLETGSKK
                     IPKKWVKEIQAFFLKRGYEINNLQELADVSNQFVSLDGLSQNQQMLVAGFAKSPLTPE
                     QLKRIAELMKSINHVEG"
BASE COUNT         3110 a         2892 c         2261 g         2915 t
ORIGIN      
        1 acctcaaaaa aactcgtaaa tagcgaaaac ccgcgaggtc gccgccccgt agcctgccgg
       61 atcaccggaa aggacccgca aaaccgagaa taagtatcaa tactatttgt gatttgaatg
      121 atgcacatca ttgaaacgcc attcatccat ataccagcag cattcggtgt tgcacttcgt
      181 aactctgtga ctacggttat aaaagcattg gcaacttttg ccaccggcaa gtcttcaatg
      241 gatttcccct gccggttttt tattttcgtc gatgcataac attgcattta catcaatagc
      301 agctattgtc attagtatgt tgcatcgatg catgggtggt attggcggtc ttcgccgacc
      361 ggttctgtgt agctccctat gaccggtttt ttatttctaa gattacagaa gcccttcact
      421 gtatgaaggg cttctgtaac tcttcttact tagtaatttt cgcaccttcc gatatttcca
      481 tgagttgaga aatcctcata ctatccgaca ataatcatca atatacgata aagacatctg
      541 accagattgc agtattaaaa gcactcatgc agactacgcc cctcatatca tatacaaggg
      601 gatactgatg gctcaggttg ccatttttaa agaaatattt gatcaagtgc ggaaagattt
      661 aaactgtgac cggttttact ctgaactaaa acgccacaat gtctcacatt acatttacta
      721 tttagccaca ggtaatattc acattgtatt tgagagcgat aacacggtgt taataaaagg
      781 tttccatgat gttattcatg ttagcttttg cagagacacg cgacttatag aaacttacct
      841 tcataagttg aaatcaagag aaatcacatt tcatgaatac agggtaaatc tggctaaagc
      901 tggagttttc cgatgggtta caaatatcca cgaacacaaa agatattact atacctttga
      961 caactcatta ttgtttaccg aaagcatcca gaacacgact caaatttttc cacgctaaac
     1021 cataacgtcc ggtttgatcc gcctcagtag ccggcactcc cacacaggag ttaccagtcg
     1081 gtgctgtggc catagttaat ctgggtatac agtaaagata cagcacatct ggcatacttt
     1141 aataaacatt aacaatatga gatttcaact cattgtttag gttttgttta aatttccaca
     1201 aatacgatgc accaaactta aaaacacaac gggaatcaca cgatgaaaaa aacgctactc
     1261 actttcacac tggcgctgct tatctctgga tgtgctcaac agacgtttac agttgaaaac
     1321 aaacctacaa cagtaacacc gaaggaaacc atcactcatc atttcttcgt ttcaggaatt
     1381 ggtcagaaga aaactgtcga tgcagccaaa atttgtggtg gcgcagataa agttgttaaa
     1441 actgaaaccc agcaaacatt cgtaaatgga ttgctcggtt ttattacttt aggcatttat
     1501 actccgcttg aagctcgggt ctattgctca caataattac atgcgctgcc catcaatatg
     1561 ggcagtttta tttacactgt taaccccttg gttgtttcag ccgccggggt tttacttgtt
     1621 attcactggt atgagtacga catctggcta tttcattccg ggctttactg tcgccgcgac
     1681 agatgcaacg catcgtatcg ccgttcagcg tagtgatata agcctcatcc gttttctcta
     1741 cctgcaaaca tgaaatattc ccgttccggc aatactcaat ttttgctgcc agatgggtat
     1801 tacgcgggta aaactccata cgatacatat ccccccagga catgcacttc ctcaacctga
     1861 cgaccatctt cagttaccgt aatctttttc agtgcgtaca tacgtacctc cgttctttcg
     1921 ttttttgaac aataaaaaag ccaccgaagt gaccttttcg atgagtttat aaaccaacgc
     1981 gctctttcat ccagccatag acaaacgact cgttagcctc gcgtttctct gccagcgcca
     2041 gataacgctc accctgcgta cagttcaggg ctttcaccag taccagttcg ccatccctgc
     2101 cgcgattttt cagataagaa cgtaacgcat taatggttcg cggcccgatc cccccgtctg
     2161 taactatgtc cggatacagc attcccttct gattaaacac attcagccag cgctgaagca
     2221 tttttgtggc taccgacggc cccatgttta ccccagtatc acacagttct gcagcaatat
     2281 caggagacag gtttgccacc tggtcaaaac gaggtccata ccaatagtcc gcctcaagga
     2341 tttccagagc ctgcccgcgg ctcaaatcac gcatatcacc acggtaacca tgcgcgcgcg
     2401 ccactttttc agtaattccc cacttcgtcg ctccgcctgt atcgtcagga tgactgacat
     2461 accccccctc ttttccgagg atttcatcaa aaatttcatc tctcgatttc atatcagcca
     2521 ctcaggaaag caaaaatttt tgaaacatta ccgcgcgcac gcactaccat gacaccaaac
     2581 accaggttca gcatcactac cagccagtct gccggcaacg gatgaccaca gagataactt
     2641 aacggcgtta tcgcatacaa cagcatcaga caccaggcgc accacgatat cagcggtttg
     2701 tgtcgggact cttttctgcg gtagaaaaaa agcgtcagta cgataaccgt acataacgcc
     2761 gcattcagta atcctggaag attatttgtc attaccacca cctcctccac gctgacggga
     2821 gaacagaccg gataccagtg atgtaatctc ctgctggtgg atgaatgaca ggacttttac
     2881 tgagagcacc gacaccagga ccgcacacaa cgcatcaacg gaagcactgt taaacccaat
     2941 acgttccgcc atgtaaccgg ccacaccacg ggccccaagc acaccaacaa taaaggacac
     3001 cagaaaatgt gcagccacac gccaggctga aagtgtctgc ggcattgttg ccacaaataa
     3061 cgcaccagcg aacgcaccaa atacaatccc gaaatccgtc ccggtaaaca gcccgaatac
     3121 cgtcgccccg ccgagcgcca cagcagtgcc ggaaccggat aagggttcag acatatttat
     3181 tctcctgtaa ataaaaagga ccatcagcgg ccctaaaaaa ctttatcaaa ggtacccgca
     3241 gatacctttt gtaggctgtt tattcagatt tgcgaagtaa aggccagagt aagaccgtta
     3301 ccatcgccac cagcacacca tcagccagta ccgacatcag ccatccagtg aaatccactg
     3361 ccactaccag aaacaacagg atggcagcca gcacaaggcg cgcacttttc acagatactg
     3421 ctccagtggt aactgaagcg cctgtgcaat tttcttgagc tgcgcttctt catccggacc
     3481 aatgccatcc tgatcagcga tatccagaca gaggcaaagc acgtcaaccg cctcagttgt
     3541 ccccgccaca tcagccagct cacgcaatgc atgcgcattc gcactacgcg gtgacgcttc
     3601 ataacgggcg cggatattgg cgctcatctg ggcaatctca ccagagaacg gtgcaaaagc
     3661 aggaagcgca gcaatagttt tctccagtac tgcgatttct ttcgcatcgc aggtgccgtc
     3721 ggcatatgca atggaatatg cgccccagac ggtcgcctcc accgcatcac ggttctccat
     3781 cttcttcact tctgtgatgg ccttgcgggt tttctttttg aaaataccta acatcgtgac
     3841 ttttcctttg cgtagacgag cctgcgccag atggttacca gcccacagtg aaagtcacac
     3901 tgacaatccc gtaagcacct cctgaaaggc tctgtgtttt tgatgtgcgc caggtgtggc
     3961 tcagatacaa aaaaagctcg ccgtagcgag ctaacagaaa atatgaagca tgtttttatc
     4021 cacgaagcat gacactgaac tcatccatgc ctacacggct ggctatctcg ttgtattcct
     4081 caacaagagc cagcaattct gaattagcag ccatgaactc atcaaaaacc ttatggatgg
     4141 catcactgtt taataaaaca atgttctttc ctgaaaggcg atcaggggta gaaaatataa
     4201 ctgttaaacg actaaaggcc ctggctcgtt cagcattaac atcctcaata cgcagcaaca
     4261 agctggagca cctggaaata tcatcaatat tcactctact cctgccatct ggatgataat
     4321 catttcacgg agagaagcac tcagaagtac cactgaagta taactggtga ccagctgctt
     4381 acacatctgt tgccatcctg ctgatgataa gtcgatatta acccttctgt ctataaatga
     4441 aacaaaggat aagttcaggt tttaacactg ccaggataaa gtattgtata cagtatagaa
     4501 gagcgttatt gaatgacata aaaaaccaga cctaatccct tatccggaag atatatcaaa
     4561 taaacgggga aaatgtatta agatggcgtt cctattctct ccatccctga tgtccacgta
     4621 actcgttata gaatcagaac gccatctgaa tacacacaaa aaagctggct tcacaccctc
     4681 ctgcatgtgt gaacgcagtg cccgaccacg tgctttcgca accagcgaaa atcagtttta
     4741 aataccgaaa aacgataaga atatatcaga acttccaagc atcctgcttg gcttagatat
     4801 taatcgagga ttagctcctg ttcttatcta attgtgcatt tcgcaattta tcgttcagca
     4861 ccaatatttc accaactgtt tgttcaaaac gcccggactc aagttcaacc ccaatcgtgc
     4921 gacgccccaa tcccattgct gcttttattg ttgcccccga tcccataaaa aaatccgcaa
     4981 ccacatcccc cggacgactg ctggcagaaa ttatctgacg caacatatcc gccggttttt
     5041 cgcagggatg cttacccgga taatactgca cgggcttatg cgtccagacg tccgtataag
     5101 gaacggcggc cgatacagaa aaataacgcc gcagagattt gtattcctca agcagactgg
     5161 catattgccg gttcagttca ctgtatgtgc tgaccagttg ctggtgtggc gttgccagct
     5221 ccccacgctg gtgcttttct tctgcaacac acgcgaacag cgcctgcagt tttctgtaat
     5281 cagcttcgtt cggtaactgc cactgacagg taccaaacca gtgcgacacc atgtttttct
     5341 ttccggtggc ttccgctatc tgtttggacg ttatccccag tgattcacgc gcatcacgga
     5401 agtaagaaat cagcggggcc atgacatgtt gtttaagctc gcgctccttt gccgcatagc
     5461 catcattttt tggctggtat ggcccctgat aatgttcggc aaacagaatg cgctctgttg
     5521 ccgggaaata cgcccgcagg ctttctttgt tgcacccgtt ccagcgtccg gacggcttcg
     5581 cccagataat gtggttcagc acattaaagc gctcacgcat catgatttcg atatcagatg
     5641 ccaggcgatg accacaaaac aggtaaagac ttccggcagg cttcagtacc cgccagaact
     5701 gagccagaca ctggtccagc catttcaggt aatcatcgtc gcccttccac tggttatccc
     5761 agccctcggg cttcacttta aaatatggcg ggtctgtgac tataagatcg acagagtttt
     5821 ccgataaggt ctggataaat tccaggcaat cggtgttgat taactcacaa ctggatattt
     5881 ttacagtatc aaccatagat caataagcac ttctctgata ggctcatacc gcttttgcgc
     5941 aaagcggatg ggcctgaggt ttgcttgtga ccccgattca tgagcagatg gctggcaggt
     6001 gccgctaaca cccaccagcc gcccattacc acaaagtaaa aagccttcac tgcggaaggc
     6061 gtctgtaaca accgaactga taatctgcca gacccgccat aacaagctgg gtcagtatta
     6121 actgacagcg ttcgcgtgaa aggtaagtat tctgcgcaat ttccccaact gttgccggtt
     6181 cagtgacgct taattcatta aacaccactc tggctgtttc tgtcatatcc tgctgtttta
     6241 gcatgtcttt ttctctttat tggttaacgt gacataccaa taactcttgt cgaagaagcc
     6301 agcaagctga aagaccggta ttaataacca cctgcacatt ttatgtaccg aaccattttt
     6361 ctggcataaa aacctctcaa tggcgggcgg taaaaatctt tgttactcaa gaaaatttaa
     6421 cgcactctga ctgtattaat ttcaaaatca ttaatatttc cgctattaaa tataacgaat
     6481 ttcttacccc cactcctgta tgatttcgat aacaccagac gatcatcata acgcgcaata
     6541 atgtaatacc atacattctc atagtggatc gcctgatatt ccctcttaaa ctgtggtttg
     6601 taccaaccgg caataagaga gaatgcccag aaataaatca taaacccagc catcatgaac
     6661 tcaattcggt gatggcgaat aaaagacatt tccgaaaaac atttgactga aacaagtctt
     6721 cttccagacc tgacaaaaag cgtgattgta aaggcagcaa gaatgcagaa aatcagtaca
     6781 tctggctcaa catgctgatg aattaccgaa aactccagaa caggtggaat aaaaagcagc
     6841 aatatcgcga gaaaaagccg gataaaactc aaattttgta tattgcgctt ttgttttatg
     6901 cccaaaaaga aaacaatacc aactccccat ccaataagga atataacgat aactgtcaca
     6961 gcataaaaca aacttcgtgc tacatcatcg acaccagccc cgacaaccca ccatggaaag
     7021 ccatagtaaa atgaagtacc ccatccatag aaataagcgc ttccccatcc tagacagccc
     7081 atataagcaa caaaaagtga agagtttctg agcagagcac tgtcatccat agtaacacca
     7141 ttaacaactc aaaaatatca acacatatta cataacaaat tggattccat gcagtcaagg
     7201 ggcgtcattg atggagaaag tattggcaca atcatcatca cgtttaatgt ctatgccatt
     7261 tttttgggga taaaaaaaac ccgctcggtc acgggtttta ctagctttgc catcacgtat
     7321 aaaaacggca aaatatcaga ttcacacgaa atatatgcct ttttatctac ttttgcaata
     7381 ctttgctatg aaaatgccgc cttttgttct gaacgtgctc cctccaccaa caataaagct
     7441 tcaccatcca gccgatgaaa aatgtgtttc attgcaaccc agtgaccagt aaatgtcttg
     7501 gaccagtttt tggttgttac tcccaccagt aacgccagtt cctggtattc gtaaccttcc
     7561 ccaccaaaaa gctcagcttt taccgcctgc gccgccaacc agatcaacgt cttcaggcgc
     7621 accagagttt ttcctgcaat ttttctggta ccggattgag cattaaattc agtccacgcc
     7681 cactgcgtta tcgcgatctg atactcccag caaatgctac cgctgtaaca ccacagcagc
     7741 caggctttat gatgttcttc aagagacaga acggcgcgtc gccatgatga tgtcgaaaac
     7801 tcaaccggac tgaccagggc aattgaagaa cctttcgcca gcgattgctt tcccgggatc
     7861 ggtggattat ccagcgttac tatttttcca gtgaccttat cgcggtaccg gattttttta
     7921 cgtctgtaac gccctgtatt gaacatggca ttctcctgcc aggcttcaag ctgacctttt
     7981 gttgctccac tcaaatcagc ggtggcgatc gtgagctgct cacgcacaaa ctgtaaatac
     8041 tggttattca tgcgcactcc agttctgtga tttttatccc cagccgacca ccgggaataa
     8101 cctgaccgcg cataatatta acttcatcaa actgctcatc gtcgataagc agtcccgcat
     8161 gtgtcagtgc atccagtggt gctttcagaa tattgtccag gtcacgacgg cgcttatccg
     8221 gcggctctgc aataattttt attgccagcc ttccggacag atttaatttc agttgctgct
     8281 ggcgaacaat aagcgccaca tcccggcgat aacgctcccc tgcttttgat acaaaatatg
     8341 tgctgccacg acgacgccag taggtattca ccgtcggagg gtaaggcaaa acaaattcta
     8401 tccccatcag taacctcttt tatccgagta cgccagttgc aaaggcgtga tcaagaaaac
     8461 gaaaaattaa atcaacctga gacccatgct tttcttcgaa cgcctgcgga tctgcatgaa
     8521 gctcgttatg atgttcccgg cacagcggca acgtaaaaat atcgtgggct tttgtcccca
     8581 ttccgccctg accgtgacca atcaggtgat ggggatcgtc tgctggctta caacaacatg
     8641 tacacggctg tgtctttacc cagcgcgtgt atttctcatt cacccagcgg cgacgtttag
     8701 gccgcttcat gaatgattcc ggtgactccg gatcaacggc aatgctgacc accgtctttt
     8761 cctgtggcgg gatttgttgc tggtggacat gaggcaacgg cgcaagattt tttgtgcgct
     8821 gcttcagtat gctggtggcg ctctgctctc ccggtacgat gtcactttcg cgatacaccg
     8881 agtggatttt ttccacacgt aatcccagag agcgacgtaa tactgcctcc ggtagcgcgt
     8941 ccgccacctg attgcagacc gcccaccagg ataattcagc cagcgataat tcccgctctt
     9001 gtgtgccatt cattgcgtga cgtatgacgt caatcatcca ggctgccaga ttctgctgag
     9061 caagttgctc cagtgaatca gatgtctgct cccgcagctg gttgtcgcag tgccagcaca
     9121 acaccatcgc gccagtaccg taacgatgta tgacggtttc gctgtgatga taatcgccgt
     9181 gtggccactg gcaggatttc acgtgacgta atagccagtc agacagtgcg ccagcaccac
     9241 ctacagcacg gatcacccgc tcatcgctga aaaatggcag taacgatttg tcttgcgcca
     9301 gcggctggcg aacagcggga acctctcctg atggcagcgc ccgcatgttt ttcggttccg
     9361 gctccaccag tacccgggta ttgtaaaata ccggcatgga ttcacggccc ggattaagga
     9421 ccaccagccc aagttccggt accagaacag gtcgaagtaa tacccgcacg ttacctccag
     9481 atacgttgct ggtatgtgcg ggatggacgc ggtgggcgtt cggaataagg gagcctgaca
     9541 gagattatcc agtgacgata atcgaggctg agggctttct taatctcgta tccttgtctg
     9601 cggtagcact gaattagcca ctcggcctgt tcttcagtgc atgggtcatg ctggaaccag
     9661 tcagatttga atgtatgaga acgccgcccg tgcctgctgg caaggtcggt atcagaattg
     9721 tgatgtttgg tattgtgcgc catcggtttt ctctgctggc gcagcaggtg ccagttgttc
     9781 aggctggcct gtggattgta aaccagaata cgtaaaacaa aaaacccgcc gaagcgggtt
     9841 tagattagat cattatgcaa ctctacgttc gggagcaacc acaaacagga atcgggaaag
     9901 ggtgcccctt cctcgcatat cgcataactc cattgataca agcggaataa cgaaaaataa
     9961 tttcgcacgg ttttccgcat tccttacaga ttttcattgc cataaccagc aagtccctgc
    10021 atacctgtat ccccatacag gttgcgattt gttgggagaa ccgctaaact tgcatctgtc
    10081 aaatccaagt gtggcggtgg ggttctccat ctgcactgga aagttatcgg actttccatc
    10141 ctaagccctg ttacagcagg gcttttttat aaaaagtcaa atgatagttg atccatataa
    10201 aatcctaatt cgcgcaaaac cacctcggca aacaaatctg cttgccattc agcatcttca
    10261 atttgcgaag gtggtttatt ggaactgtga aataacgctc tatgccccaa caccaaatgt
    10321 ccgatttcat gaaagagcac aaataatgct tctctatcac ctttacatgc caactcaaat
    10381 gtatgattcg gcacactaat tgtcagtgta attggatcgt aatgcccaga tgtcaaatca
    10441 tatgtagctt tagtccacgc acgatcctca acgatattga gcgttatccc atattcactc
    10501 aacaactcaa atgcatggtc taaccgcttt tttcttttca acgttttaag gtcgaagatc
    10561 gcgctatagt taacagcgcg agttgttata tcaacaatac tcattggtgc aacacgattt
    10621 ccacgtaatg tgtaagctga ttgttccaac gattatccct caacatgatt aatacttttc
    10681 atcaactctg ctattcgctt taactgctct ggtgttaatg gggatttagc aaaaccagca
    10741 accaacattt gctgattttg cgacaatcca tcaagggaaa caaactgatt agatacatca
    10801 gccaattcct gaagattatt aatctcataa cctcttttca ggaaaaaagc ctgaatctct
    10861 tttacccatt ttttggggat tttcttactg cctgtttcta aaccgctcag aaaagctgaa
    10921 gttactccca gttcttgggc catcgtaagc aatgtgcagt cggtatctat cctcgctttt
    10981 ctaacggcct taccgaattc agtgagtgcc atagttaatt cctcgattcg ctataagtaa
    11041 caggctgcct attttcggag cacaacctgt gatgaagact tcatgactaa taaattatca
    11101 taaaaaatga ttttgtaaac cattttggta aatttattat ctgaaagcaa aaaaacgcca
    11161 aagagggtta agcgcggg
//
LOCUS       DAPGWB010000146        11175 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.148, whole genome shotgun sequence.
ACCESSION   DAPGWB010000146 DAPGWB010000000
VERSION     DAPGWB010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11175
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.148"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            84..188
                     /locus_tag="RHX79_003705"
     CDS             84..188
                     /locus_tag="RHX79_003705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001312672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2618 domain-containing protein"
                     /protein_id="HDV2198824.1"
                     /translation="MENNNRLMPHIRRTTHIMKFAHRNSFDFHFFNAR"
     gene            499..2697
                     /gene="speF"
                     /locus_tag="RHX79_003706"
     CDS             499..2697
                     /gene="speF"
                     /locus_tag="RHX79_003706"
                     /EC_number="4.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase SpeF"
                     /protein_id="HDV2198825.1"
                     /translation="MSELKIAVSRSCPDCFSTHRACVNIDESNYIDVAAIILSVSDVE
                     RGKLDEIDATGYDIPVFIATENEERVPAEYLPRISGVFEHCESRKEFYGRQLETAASH
                     YETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEMLFRSDLC
                     NADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVL
                     FDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEESYLRELITEVAPQR
                     AKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCS
                     PLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMH
                     ASTSPFYPLFAALDINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELV
                     DGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNG
                     EYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLL
                     ESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNVKQLQKEMFRKEHFPRV
                     SMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFS
                     ALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQSTLLKGEKL"
     gene            2694..4013
                     /gene="potE"
                     /locus_tag="RHX79_003707"
     CDS             2694..4013
                     /gene="potE"
                     /locus_tag="RHX79_003707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine-ornithine antiporter"
                     /protein_id="HDV2198826.1"
                     /translation="MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIIS
                     WLVTAVGSMALAWAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVA
                     IAISAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIP
                     VVGLCIIGWFWFSPTLYVDSWNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVEN
                     PERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKV
                     IMALMVMSCCGSLLGWQFTIAQVFKSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQS
                     GLALMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFVA
                     FVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPRFELKNKHG"
     gene            complement(4069..5709)
                     /gene="pgm"
                     /locus_tag="RHX79_003708"
     CDS             complement(4069..5709)
                     /gene="pgm"
                     /locus_tag="RHX79_003708"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HDV2198827.1"
                     /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT
                     SGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL
                     AANGVDVIVQENNGFTPTPAISNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP
                     NGGPADTNVTKVVEDRANALMADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADI
                     VDMAAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGA
                     IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ
                     HRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES
                     AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQA
                     AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP
                     SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA"
     gene            complement(5735..6280)
                     /gene="seqA"
                     /locus_tag="RHX79_003709"
     CDS             complement(5735..6280)
                     /gene="seqA"
                     /locus_tag="RHX79_003709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HDV2198828.1"
                     /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAP
                     VTKEVRVASPAIVEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLD
                     AQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMI
                     EHIMQSMQFPAELIEKVCGTI"
     gene            6465..7229
                     /gene="ybfF"
                     /locus_tag="RHX79_003710"
     CDS             6465..7229
                     /gene="ybfF"
                     /locus_tag="RHX79_003710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HDV2198829.1"
                     /translation="MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN
                     IIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALA
                     PDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ
                     FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLL
                     AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND"
     gene            7369..7662
                     /gene="ybfE"
                     /locus_tag="RHX79_003711"
     CDS             7369..7662
                     /gene="ybfE"
                     /locus_tag="RHX79_003711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415211.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HDV2198830.1"
                     /translation="MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKR
                     DKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV"
     gene            7802..8332
                     /gene="fldA"
                     /locus_tag="RHX79_003712"
     CDS             7802..8332
                     /gene="fldA"
                     /locus_tag="RHX79_003712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDV2198831.1"
                     /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL
                     EAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL
                     GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW
                     VKQISEELHLDEILNA"
     gene            8542..8628
                     /gene="uof"
                     /locus_tag="RHX79_003713"
     CDS             8542..8628
                     /gene="uof"
                     /locus_tag="RHX79_003713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001491546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fur leader peptide"
                     /protein_id="HDV2198832.1"
                     /translation="MIRIISRANSVTSSNEVNRLVTGQIPHD"
     gene            8621..9067
                     /gene="fur"
                     /locus_tag="RHX79_003714"
     CDS             8621..9067
                     /gene="fur"
                     /locus_tag="RHX79_003714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HDV2198833.1"
                     /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI
                     DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF
                     SDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK"
     gene            complement(9151..9477)
                     /locus_tag="RHX79_003715"
     CDS             complement(9151..9477)
                     /locus_tag="RHX79_003715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198834.1"
                     /translation="MKKLILIAMMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSP
                     EKIEACQSVLNVLKKEKQHQQFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQE
                     IRSNNK"
     gene            complement(9527..10933)
                     /gene="chiP"
                     /locus_tag="RHX79_003716"
     CDS             complement(9527..10933)
                     /gene="chiP"
                     /locus_tag="RHX79_003716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitoporin"
                     /protein_id="HDV2198835.1"
                     /translation="MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGG
                     IYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAEN
                     GDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL
                     APHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKV
                     DYLHSLGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRD
                     KVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRMTPTYAS
                     SNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGFAIGASYVYAWDAKPATWQS
                     NPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYGNI
                     FQDERDVKFMVIAPFTIF"
BASE COUNT         2704 a         2756 c         2789 g         2926 t
ORIGIN      
        1 ttgttgatct tcttcacaga ttatagccat ttcatggata gaataactct accttcaact
       61 gacacagcaa gaggtaaagg taaatggaaa ataataaccg cttaatgcct catataaggc
      121 ggacaaccca tatcatgaag tttgcccatc gtaatagttt tgactttcat ttctttaatg
      181 cccgctagtc ttctgactaa agggcacccc aacgtacagg tctccctgac tttaagcatt
      241 acaggttaat acctgtattc ctcggtgctc atatactgct aaccctttta aactctaaat
      301 aattcgagtc gcagcacttg caacttgagg tatgacgagt atagccagtt accgggctgg
      361 tctgggttat tgcatctgca aaaagcaaac tactgattta tttatcagcg gtggagcttt
      421 gctttttttc cggcgtgatc gatttctcct ttgagaaatt gaggacctgc tattacctga
      481 aataaagaga tgaacaaaat gtcagaatta aaaattgccg ttagtcgttc ttgcccggat
      541 tgtttttcca ctcatcgtgc atgcgtgaat atagacgaaa gtaattatat tgacgttgcc
      601 gccattattt tatcagtcag tgatgttgaa cgtggaaaac tcgatgaaat agacgctact
      661 ggctatgaca ttcctgtttt tattgcaacg gaaaatgaag aacgtgtacc cgcagaatat
      721 ctgccacgta tttctggtgt cttcgaacat tgcgaatcac gtaaagagtt ttatggacgt
      781 cagttagaaa ccgctgccag ccattatgaa acgcaactgc gcccgccctt cttccgcgca
      841 ctggtcgatt atgttaatca gggcaatagt gcttttgact gccctggtca tcaggggggt
      901 gagtttttcc gtcgccatcc ggcaggcaat cagttcgtgg aatactttgg cgaaatgctc
      961 ttccgctctg acttgtgtaa tgctgacgta gcaatgggcg atctgctgat tcatgaaggt
     1021 gcgccatgta ttgcacaaca gcatgcggct aaagtcttta atgccgataa aacctatttc
     1081 gttttaaacg gtacttcatc ttctaataaa gtggtcttaa acgcattgct gacgccgggc
     1141 gatctggtgt tgtttgaccg caataaccat aaatctaacc accacggtgc gttgctacag
     1201 gctggcgcga caccggttta tctggaaacc gcacgtaacc cgtatggctt tatcggtggc
     1261 attgatgcgc actgttttga agaaagttac ctgcgtgagc tgattacaga agttgcaccg
     1321 cagcgggcaa aagaggctcg tcctttccgc ctcgccgtta ttcagctagg cacttacgac
     1381 ggtacgattt ataacgcccg tcaggtggtg gataaaattg gtcatctgtg tgactacatc
     1441 ctctttgact ccgcatgggt cggctatgaa cagtttattc cgatgatggc tgactgttcg
     1501 ccgctgttgc tggatcttaa tgagaacgat ccgggtattc tggttacgca atccgtacat
     1561 aaacagcagg ctggtttttc tcaaacttca caaatccata aaaaagacag ccacatcaaa
     1621 gggcaacagc gttatgtacc gcacaaacgc atgaacaacg cctttatgat gcacgcctcc
     1681 accagcccgt tctatccgct gtttgccgca ctggatatca acgccaaaat gcatgaaggt
     1741 gtcagcggtc gtaatatgtg gatggattgt gtggtaaatg gcattaatgc ccgcaaactg
     1801 atcctcgata actgtcagca tattcgtccg ttcgtacctg aactggtgga tggtaaaccc
     1861 tggcagtcgt atgaaacagc gcaaattgcg gttgatctgc gcttcttcca gtttgtacca
     1921 ggggaacact ggcattcttt tgaaggctat gcagagaatc aatactttgt cgatccttgc
     1981 aaactgttgc tgacaacccc aggtattgat gcacgtaacg gcgaatatga agcgttcggt
     2041 gtacccgcga cgattcttgc taacttcctg cgcgaaaatg gcgtagtgcc ggaaaaatgc
     2101 gatcttaact ccatcctctt cctgctgact ccggcagaag atatggccaa gcttcagcaa
     2161 cttgttgccc tgctggtacg cttcgaaaaa ctgcttgagt ccgacgcgcc attagcagaa
     2221 gtgctgcctt ccatctacaa acagcatgaa gagcgctacg ccggttatac cctgcgtcag
     2281 ttgtgtcaag aaatgcatga tttgtatgcc cgtcacaacg tgaaacaact gcaaaaagag
     2341 atgttccgta aggaacactt cccacgcgta agcatgaatc cgcaagaagc caactacgcc
     2401 tatttacgcg gtgaagtgga gctggttcgt ctgccggatg cagaaggccg tatcgctgcc
     2461 gaaggtgcgc ttccttatcc tccgggtgtg ctgtgcgttg ttccgggtga aatctggggt
     2521 ggtgctgttc tgcgttactt cagcgctctg gaagaaggga tcaacctgtt gccaggtttt
     2581 gcaccggagc ttcagggtgt ctatatcgaa gaacatgatg gtcgtaagca agtttggtgc
     2641 tatgtcatca agcctcgtga tgcgcaaagt accctgttga aaggggaaaa attatgagtc
     2701 aggctaaatc gaacaaaatg ggcgtcgttc agttaaccat actgacgatg gtcaacatga
     2761 tgggctccgg tatcatcatg ctgccgacaa agcttgccga agttgggaca atttcaatta
     2821 tctcctggct ggtgacagcc gtaggctcaa tggcactggc atgggcattc gcaaaatgcg
     2881 gtatgttcag ccgtaaatca ggtggtatgg gcggttatgc cgagtatgct ttcggtaagt
     2941 ccggcaattt tatggcgaac tacacctacg gtgtctcgct gctgattgct aacgtcgcga
     3001 ttgctatttc ggcggttggt tacggcaccg aactgctcgg cgcgagtttg tcgccagtgc
     3061 agattggtct tgcgaccatc ggagtgctgt ggatttgtac cgtggctaac tttggtggtg
     3121 cgcgcattac cgggcaaatc agtagcatta ctgtgtgggg ggtcattatt ccggtggtag
     3181 gcctgtgcat tatcggctgg ttctggttta gcccgacgct ttacgttgat tcctggaatc
     3241 cgcatcatgc accgttcttc agtgcagtag gttcttccat cgctatgacg ctgtgggctt
     3301 ttctcggtct ggagtctgcg tgtgcgaata ctgatgtagt ggaaaacccg gaacgtaatg
     3361 tgccaatcgc ggtactcggc ggtacgttag gtgcggcggt gatttatatc gtctccacca
     3421 acgtgattgc agggattgtg cctaatatgg agctggcaaa ttcaacggca ccatttggcc
     3481 tggccttcgc acagatgttc acaccagaag tgggtaaagt cattatggcg ctgatggtga
     3541 tgtcctgctg cggttcgctg cttggctggc agttcaccat tgcccaggtg tttaaatctt
     3601 catctgatga aggctacttc cctaaaattt tctcccgtgt aaccaaagtg gatgcaccgg
     3661 tgcagggaat gttgaccatt gtgattatcc agagcgggtt ggcgctgatg acgattagcc
     3721 cgtcgctaaa cagtcagttc aacgtgctgg ttaacctggc cgtggtgacc aatatcattc
     3781 cgtatattct gtcaatggcg gcattagtca ttattcagaa ggtcgctaat gtgcccccct
     3841 caaaagcgaa agttgcaaac tttgttgctt ttgttggcgc gatgtatagc ttttatgcgc
     3901 tgtactcatc cggggaagaa gccatgctgt acggttccat cgtgaccttc cttggttgga
     3961 cactgtatgg tctggtatca ccacgctttg aactgaaaaa taaacacggt taaaaaagca
     4021 aagtaaaaaa gggcgatctt gcgaccgccc tttttttatt aaatgtgttt acgcgttttt
     4081 cagaacttcg ctaacaatct caaccgcttc tttctcaatc tgcttgcgat gttcttcacc
     4141 gaggaagctt tcgcagtaga tcttatatgc gtcttccgtg cctgacggac gcgcggcgaa
     4201 ccagccgttg tcggtcatca ctttcagacc gccgatagaa gcaccattgc ccggtgccgc
     4261 cgtcaggcgc gcggtgatcg ggtcgcctgc aagggtgctg gcgctcacca tttccggaga
     4321 cagcttagac agcgccgctt tttgtgcgga agtcgcggct gcctgcaaac ggttgtagct
     4381 cggcgcacca aagcgttttg ccagttcgtt gtagtgttcc tgcgggttct taccggtgac
     4441 agcggtgatt tccgccgcca gcagacacat aatgatgccg tctttgtcgg tggaccacgg
     4501 cgtgccgtcg aaacgcagga aggaagcccc tgcgctctct tcgccgccaa agccgaagct
     4561 gccgtcgaac agaccatcaa caaaccattt gaaacctacc gggacttcta ccagcttacg
     4621 gcccaagtca ttgaccacac ggtcgatcat cgcagaagaa accagcgttt taccgacagc
     4681 aacatctttg ccccactgcg gacgatgctg gaacaggtag ttgatcgcca ccgccaggta
     4741 gtggttcgga ttcatcaaac ctgccggagt gacgataccg tgacggtcat aatccgggtc
     4801 gttagcaaac gccagatcga acttatcacg cagtgccagc aggcccgcca tcgcacactc
     4861 ggaggagcag tccatacgga tcgcgccgtc tttatcaagg tgcataaagc ggaaggtttg
     4921 atcgacctga tcgttaacga tggtcaggtt gaggttgtaa tactcgccaa tacgcttcca
     4981 gtattcgata ccggaaccgc ccagcggatc aacgcccagc gtcaggcccg ctttctgaat
     5041 tgccgccata tcaacgatat cggccagacc ttccacaaac ggctgcacca gatcctgctc
     5101 ttttacatga ccggatgcca tcgcttcgtc gagggagata cgcttcacgc ctttcaggcc
     5161 atcggccatc agtgcgttgg ccctgtcttc caccactttg gtgacgttgg tatcagccgg
     5221 gccaccattt ggcgggttgt acttgatacc accatcttcc ggcgggttat gggacggtgt
     5281 aatcacgata ccgtctgcca gcgggccacc ttttttattg tgaaccagga tggcattgga
     5341 aatggcaggt gtcggagtga agccattgtt ttcctgcaca atgacatcaa cgccgttcgc
     5401 tgccagcact tccagtacgg aaatgaacgc aggctcggac agggcgtgag tatctttacc
     5461 cacatagcaa gggccagtga tgccgttttt cgcacgttct tcagcaattg cctgagcgat
     5521 cgccagaatg tgcggctcgt taaagctgtg gcgcgctgca ctgccacggt gaccggaagt
     5581 accgaatttc accgcgtgct ccgcattccc tgcttctggt ttcagtacat aatattgcgc
     5641 cgtcagttgg gcgacgttaa tcaaatcact ctgttgtgca ggttggcctg cacgattgtg
     5701 gattgccatt gctttgtcct ttgtctgcaa cgttttagat agttccgcaa accttctcaa
     5761 tcaattccgc cgggaattgc atcgactgca tgatgtgttc gatcatgctg catttacggc
     5821 cggtgttggt gttggtgatc acccaatacg gcgtgcctgg cacatgtttc ggcttggtct
     5881 gattaccatt tttcagcagc gtttgttcat ctgccgcaaa gtaaacgcgt gtacgaccgt
     5941 gcaacgattc cgttgcttcg gcaaacgcct gggcgtcaag agaatatagt gtagacaaca
     6001 gcagcataaa gcgattgacc gctcgctttt gctctgcgta ttcatccgaa agcagaagtt
     6061 cacgcattgc gcgaaccttg tctttaatcg ttttgaccgg cttcgcttcg acgatagcag
     6121 gtgacgcaac gcgaacctct ttcgtcaccg gagcagcagg ctgtgatgcg gcggaaaatt
     6181 tcaacatacg ccgtaaaatg tcggatgcgc tctcgccgat atgcttagtg tggctggcaa
     6241 tatagctgta gagttcatca tcaacttcaa tcgttttcat cttaatccag tgcagtgtct
     6301 tagctgaata caagtcgcca ggagtatatg aataaatccc ggcagcggat agcgtcaagc
     6361 ctggcttgca gaaaaactcg gaataaacct tatttgttgc agccctgtgg cacaatggtc
     6421 aacataatac cctaacccga caacgcgaaa aaaagaactt tgccatgaaa ttgaatatcc
     6481 gcgcgcaaac tgcacaaaac cagcacaata attctcccat cgttcttgtc catggtctgt
     6541 ttggtagcct cgacaacctt ggcgtactgg ctcgcgatct ggtaaacgat cacaatatca
     6601 tccaggttga tatgcgtaac cacggtcttt caccgagaga tccggtaatg aattacccgg
     6661 cgatggcgca ggatcttgtt gatactttgg atgcacagca gatcgacaaa gcaacattta
     6721 tcggtcactc catgggcggt aaagcggtaa tggcacttac tgcactggcc cccgatcgca
     6781 tcgataaact ggtggcgatc gatatcgcac cggtcgacta tcacgtacgc cgtcatgatg
     6841 agattttcgc ggctatcaac gcggtcagtg aatcggacgc acaaactcgc cagcaagcag
     6901 cagcaataat gcgccagcat cttaatgaag aaggggtgat tcagtttctg ttgaaatctt
     6961 ttgttgacgg ggagtggcgc tttaacgtgc cggtattgtg ggatcagtat ccgcatattg
     7021 tgggttggga gaaaatcccg gcatgggatc accctgccct gtttatccct ggcggcaatt
     7081 ctccgtatgt tagcgagcag taccgtgatg atttactggc acaatttcca caggcacggg
     7141 cgcatgtgat tgcaggcgcg ggtcactggg tccatgctga aaaaccggat gcggtattac
     7201 gcgctatccg tcgctatctc aatgattaac gcaactgatt aaaaacccag cgtccgcgtc
     7261 gctttccgcg cgtgggcgtt ggcgtgactc atcgcgctga tgtattatgg cgcgctatcc
     7321 atccgggcag aggcctggct gattgtttcc cccgaagtca ccaagatcat ggccaaagaa
     7381 caaacggacc gtacgacatt agatctgttc gcgcacgagc gtcgaccggg acgaccgaaa
     7441 actaatccgc tttcgcgcga tgaacagctg cgtattaata aacgcaacca gctaaaacgc
     7501 gacaaagtac gtggccttaa gcgtgtcgaa ctgaagctga acgcggaagc tgtcgaggcg
     7561 ctgaacgagc tggcggagtc gcgcaatatg agccgtagcg aactgatcga agagatgtta
     7621 atgcagcaac tggcggcgct gcgtagtcag ggcatcgttt aaatttccac tttcatgtag
     7681 cacagtgtgc agtcctgctc gtttgctgat tccgcaagac tgcctgttct gctatgattg
     7741 cctttatccg tgggcaattt tccaccccca tttcaataag tttcaagagg ttatttcact
     7801 catggctatc actggcatct ttttcggcag cgacaccggt aataccgaaa atatcgcaaa
     7861 aatgattcaa aaacagcttg gtaaagacgt tgccgatgtc catgacattg caaaaagcag
     7921 caaagaagat ctggaagctt atgacattct gctgctgggc atcccaacct ggtattacgg
     7981 cgaagcgcag tgtgactggg atgacttctt cccgactctc gaagagattg atttcaatgg
     8041 caaactggtt gcgctgtttg gttgtggtga ccaggaagat tacgccgaat atttctgcga
     8101 cgcattgggc accatccgcg acatcattga accgcgcggt gcaaccatcg ttggtcactg
     8161 gccaactgcg ggctatcatt tcgaagcatc aaaaggtctg gcagatgacg accactttgt
     8221 cggtctggct atcgacgaag accgtcagcc ggaactgacc gctgaacgtg tagaaaaatg
     8281 ggttaaacag atttctgaag agttgcatct cgacgaaatt ctcaatgcct gatgtgatgc
     8341 ggcgtagact catgtctacg ccgtattaat agataatgcc aatcaaaata attgctacaa
     8401 atttgtaact tttgctgttg tacctgtaca atgtcccggt gttcaagtgg ccttgccgtt
     8461 gtaaatgtaa gctgtgccac gtttttatta acaatatttg ccagggactt gtggttttca
     8521 tttaggcgtg gcaattctat aatgatacgc attatctcaa gagcaaattc tgtcacttct
     8581 tctaatgaag tgaaccgctt agtaacagga cagattccgc atgactgata acaataccgc
     8641 cctaaagaaa gctggcctga aagtaacgct tcctcgttta aaaatcctgg aagttcttca
     8701 ggagccggac aaccatcacg tcagtgcgga agatttatac aaacgtctga tcgatatggg
     8761 tgaagaaatt ggtctggcta cggtatatcg cgtactgaac cagtttgacg acgctggtat
     8821 cgtcacccgc cacaattttg aaggcggtaa atccgtattt gaactgacac agcaacatca
     8881 ccacgatcac ttgatctgcc tcgactgcgg caaggttatc gaatttagtg atgattccat
     8941 cgaagcgcgt cagcgtgaaa ttgccgcaaa acatggcatt cgcctgacta accacagtct
     9001 ctatctttac ggtcactgtg ccgaaggcga ttgccgcgaa gatgagcacg cgcacgaagg
     9061 caaataagcc agcctgaacg agaaaagcca acctgcgggt tggctttttt atgcaaggga
     9121 aataagaaaa gcgagagtta cagctctcac ttatttgtta ttactgcgaa tttcctgcca
     9181 aactttatca caatcggctt tcaccgcctg gtcattaccg gtttgcgttg cgcgcagaca
     9241 ctgctgataa tccagtacgc gtacactttc ctggtcggca aactgctgat gttgtttttc
     9301 tttcttcagc acgtttaaca cgctctggca ggcttcaatt ttttctggcg aaccttgtgc
     9361 ggtgttgata caggcgctgt atgcctcttt cagacgactg tcttcctgtg gcgcggttga
     9421 ttgcgcacaa gctaccagcc ccgatgccat catggcgatg agaatcagtt ttttcatagc
     9481 aaattcctca aacgtgcggc aggcacaaaa cctgccgcgt cgggcatcag aagatggtga
     9541 atggtgcgat taccataaat ttcacgtcac gctcatcctg gaagatgtta ccgtaaccgc
     9601 cgccccagct tgggatgtca gagtggttgt cgtattcggt gaagtgcagt ttgaacatcg
     9661 tgcctttggc gcggccgtcc tgaatggtgt agaccgcatc caggctgtag gcagactctt
     9721 caatagtccg gtttttgtcg tagtacgcat ccggattgct ctgccaggtc gcaggtttag
     9781 catcccatgc gtaaacgtag gaagcgccga tggcgaagcc tggaagattc cagtttttca
     9841 ggtcatacat cgcaccgaag aagaccgctt tttctccgtt agcgttgaag tcggaacggt
     9901 tatcccacca gatatccagg cgaccgttcg aggaagcgta ggttggagtc atacgttgca
     9961 ggaagtatcc ctgctgaccg tcagccttaa cccaggtgcc ttcaaggcgc aaatccacta
    10021 cgtcagccgc ccggtaacca aaggtcaatg cttgcagcca agcggtgccg tcataaagat
    10081 cgttgacgct gcgatcgtca actttatcgc gggtaccgta gaactggtag ctggtggtta
    10141 acgggctacc ggcgatatca aatttgtagc tggctttggc aaaatattga tcgatatacc
    10201 cttccgcctg accaaatgcc gcttccagta cgaagttatt tttgaagtcg tatttcgccc
    10261 caagggagtg cagataatca actttggtgg ttttatcgtt ctgataaaac tcatccattt
    10321 ccagatgcca cggcgctttg tattcgttgg tccacatgta ggagaaactc aacgcaccag
    10381 catcgccgta atcaaaattc gccccggctt ccgccccctg ataagtacct ggcataaagc
    10441 tccagtgcgg cgctaacagc gtttgaccag ttggctgaat gtaacctgcc ctcgcccaaa
    10501 ccggaccgta tttaaatttg gccgcagctt tatacaggct tataccgctt ttgtcgccgg
    10561 accagtcttc gtcataggct ttattacttt ttgaaaacgc gatttcgttc gggtgggagc
    10621 tgtcgccgtt ttccgccatt tcaatcgccg taaacgcagc aatatcaagg ccgaacatat
    10681 cagcagcata accggactga aaatcgaggt tggcattcca ggtggagtga gaaaggttgg
    10741 ttttgtattt gtcgccgtcg gtaacatctt tacggtcgcg ttcacgctgc cagtaatata
    10801 taccgccggt taaggttgaa tcgtcgatga atccttcggc gcgagcctcc ggcattgcca
    10861 taaagcccga cattgctgta acaccggcga tagccagcgc cagcgtacta cgtttgccac
    10921 taaacgtacg catgggttaa tcctctttga cgtataaatt gctgcaccaa aggtgaacag
    10981 cgaaaaaata aaaattaaaa aagtagcgtt gagaaaagtc tcgctgacta caggaacaga
    11041 ctatttttcg cgacgcgaat tatcaatctc tttctgtaac cagaatgtaa gaacatgagc
    11101 aaccgcacat attttgatga tttttgttac aaggcttaag tttgcggttg aaaggcttgc
    11161 agaagaataa aagcg
//
LOCUS       DAPGWB010000147        11123 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.149, whole genome shotgun sequence.
ACCESSION   DAPGWB010000147 DAPGWB010000000
VERSION     DAPGWB010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 11123)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11123)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11123
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.149"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            15..905
                     /locus_tag="RHX79_003717"
     CDS             15..905
                     /locus_tag="RHX79_003717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000784071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2198836.1"
                     /translation="MKMSIKQLRAFLAVAHTLNFAHASERLNMSQPALSLAIKGLEDA
                     LGGALLLRTTRKVTLTQEGETLLSMARPLLADWDNTEEAMRQRFTLRRGKVSVAAMPS
                     FAANVLPPVLKTFRDCYSGINVTVHDVVNEQVIEMVSEGRVEMGIAFEPDYCGHVHFT
                     PLGVDRFVAIVPADSRLANRQRVSWRDLLTLDFITLQRPSAVRLMLEEQLAQSGTQLE
                     VALESHQLVTVGRLVANGLGGSAVPALCRRQMSELGAVCLELDNPVIERRVGVLRSSH
                     HKLSTAAQALMETLKKTYDA"
     gene            complement(942..1868)
                     /locus_tag="RHX79_003718"
     CDS             complement(942..1868)
                     /locus_tag="RHX79_003718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV2198837.1"
                     /translation="MSDTLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGET
                     LGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRI
                     ITEPLWIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQ
                     PDVIVLDEPTSALDISVQAQILNLLVTLQDNHGLTYVLISHNVSVIRHMSDRVAVMYL
                     GQIVELGEAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFF
                     YERCPLATSGCEVRQSLTTRADGREIRCWRAL"
     gene            complement(1861..2847)
                     /locus_tag="RHX79_003719"
     CDS             complement(1861..2847)
                     /locus_tag="RHX79_003719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV2198838.1"
                     /translation="MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGES
                     GSGKSVTAMLIMRLLPTGSYCVHRGQISLLGDDVLNAREKQLRQWRGARVAMIFQEPM
                     TALNPTLRIGLQMMDVIRHHQPISRREARAKAIALLEEMQIPDAVEVMSRYPFELSGG
                     MRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMA
                     VVSQLCDSVYVMYAGSVIESGVTADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGT
                     VPNLTHLPEGCAFRDRCYAAGAQCENVPALTACGDNNQRCACWYPQQEVISV"
     gene            complement(2844..3740)
                     /locus_tag="RHX79_003720"
     CDS             complement(2844..3740)
                     /locus_tag="RHX79_003720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D,D-dipeptide ABC transporter permease"
                     /protein_id="HDV2198839.1"
                     /translation="MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTGAVIIVLML
                     LMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLV
                     VVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAM
                     LAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLISWHILRNSLPPLIVQA
                     SLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAV
                     GFNLFGDGIRDLLDPKAGGKQS"
     gene            complement(3737..4759)
                     /locus_tag="RHX79_003721"
     CDS             complement(3737..4759)
                     /locus_tag="RHX79_003721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV2198840.1"
                     /translation="MTFWSILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDR
                     ASNAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLE
                     LAFCALLLALLIGIPLGILSAVWRNRWLDHLVRLMAITGISTPAFWLGLGVIVLFYGH
                     LQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGI
                     VARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYG
                     AVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRI
                     GRGGGE"
     gene            complement(4761..6221)
                     /locus_tag="RHX79_003722"
     CDS             complement(4761..6221)
                     /locus_tag="RHX79_003722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004015903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV2198841.1"
                     /translation="MLVIGKAADPQTLDPAVTIDNNDWTVTYPSYQRLVQYKTDGDKG
                     STDVEGDLASSWKASDDQKEWTFTLKDNAKFADGTPVTAEAVKLSFERLLKIGQGPAE
                     AFPKDLKIDAPDEHTVKFTLSQPFAPFLYTLANDGASIINPAVLKEHAADDARGFLAQ
                     NTAGSGPFMLKSWQKGQQLVLVPNPHYPGNKPNFKRVSVKIIGESASRRLQLSRGDID
                     IADALPVDQLNALKQENKVNVAEYPSLRVTYLYLNNSKAPLNQADLRRAISWSTDYQG
                     MVNGILSGNGKQMRGPIPEGMWGYDATAMQYNHDETKAKAEWDKVTSKPTSLTFLYSD
                     NDPNWEPIALATQSSLNKLGINVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADPYM
                     FMNYWFESDKKGLPGNRSFYENSEVDKLLRNALATTDQTQRTRDYQQAQKIVIDDAAY
                     VYLFQKNYQLAMNKEVKGFVFNPMLEQVFNINTMSK"
     gene            complement(6326..6907)
                     /gene="ddpX"
                     /locus_tag="RHX79_003723"
     CDS             complement(6326..6907)
                     /gene="ddpX"
                     /locus_tag="RHX79_003723"
                     /EC_number="3.4.13.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine dipeptidase"
                     /protein_id="HDV2198842.1"
                     /translation="MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHK
                     DAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGT
                     AIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
                     SEWWHFELPQAASYPLLADQFSCFISPGTQHVS"
     gene            complement(7165..9564)
                     /gene="dosP"
                     /locus_tag="RHX79_003724"
                     /gene_synonym="pdeO"
     CDS             complement(7165..9564)
                     /gene="dosP"
                     /locus_tag="RHX79_003724"
                     /gene_synonym="pdeO"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-sensing cyclic-di-GMP phosphodiesterase"
                     /protein_id="HDV2198843.1"
                     /translation="MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKL
                     WGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW
                     TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ
                     CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT
                     GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE
                     IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEVQNAQSWSATIRQRDGAPAGIL
                     QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN
                     YLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI
                     EGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDVGKNRDYL
                     LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF
                     AETGELYGIEALARWHDPQHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS
                     QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK
                     RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI
                     TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK
                     I"
     gene            complement(9589..10971)
                     /gene="dosC"
                     /locus_tag="RHX79_003725"
     CDS             complement(9589..10971)
                     /gene="dosC"
                     /locus_tag="RHX79_003725"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DosC"
                     /protein_id="HDV2198844.1"
                     /translation="MEMYFKRMKDEWTGLVEQADPLIRAKAAEIALAHAHYLSIEFYR
                     IVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIG
                     IPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDS
                     SASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFG
                     LWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTV
                     SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV
                     DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLR
                     TAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGR
                     NRVELWKASL"
BASE COUNT         2740 a         2872 c         2823 g         2688 t
ORIGIN      
        1 taacggaatg ccagatgaaa atgagcatca aacagttacg cgcgttttta gcggtagctc
       61 acactctgaa ctttgcccat gccagtgaac ggctgaatat gtcgcagcct gcgctaagtc
      121 ttgccattaa aggactggaa gatgccttag ggggcgcttt actgctgcgt actacgcgaa
      181 aagtgacatt aacccaggag ggggaaacgc tattgtcgat ggcacggcct ttgctggctg
      241 actgggataa cactgaggag gccatgcgtc agcgattcac gctcaggcgg ggcaaagtct
      301 cggtggcagc gatgccgtca tttgcagcca acgttctgcc tccggtgctg aaaaccttcc
      361 gcgattgtta ttcagggatt aatgtcaccg tgcacgatgt ggtgaatgag caggtgatcg
      421 aaatggtgag cgaagggcgt gtggagatgg gtattgcctt tgaacctgac tattgcggcc
      481 atgtgcattt taccccactg ggcgtggatc ggtttgtcgc tattgttcca gccgattcac
      541 gactggcaaa tcggcaacgc gtgagttggc gggatttgct gacgctcgat tttatcaccc
      601 tccagcgacc gtcagccgtc aggttgatgc tggaggagca gttggcacaa agtggaacgc
      661 aactggaagt ggcgctggaa agccatcaac tggttacggt tgggcggctg gtggcaaacg
      721 gtttgggagg aagcgctgtg cctgcgctgt gccgcaggca gatgagcgaa ctgggcgcag
      781 tgtgtctgga actggataat ccagtgattg agcgacgagt aggcgtactg cgttcgtcac
      841 accataagct ttctactgcg gcgcaggcgt tgatggaaac gttaaaaaaa acctatgacg
      901 cataacgttt ccgcagacat gcaatagccg gatgccgcgt cctacagcgc ccgccagcaa
      961 cggatctcac gtccgtcagc ccgcgtcgtt aatgattgcc ggacttcgca tccgctggtt
     1021 gcaagggggc aacgttcgta gaaaaaacag ccttgcggca acgtgcggtt tcccggcaga
     1081 tccgttttac gtaatgccca ttcttcctcc agcggtttat caatggcggg gagggaatcc
     1141 agcaataatc gggtatatgg atgtgccgga gcagtcaaca cctgttgcgc ttcccctagt
     1201 tccacaatct gcccgagata catcaccgcc acccgatcgc tcatatgacg tatcaccgag
     1261 acattgtgtg aaatcagcac ataagtcagc ccgtgattgt cctgtagcgt taccagtaaa
     1321 ttgaggatct gcgcctgcac ggagatatcc agcgcagagg ttggctcatc aagcacaatc
     1381 acgtcaggct gcgaagagag tgctctggca atggcgatac gttgccgctg cccgccggag
     1441 aacgcatgag gcaggcggtc gagatactcc ggacgaatac ccacctgcac agccagctcc
     1501 tctgccaacg ctcgccgctg ttgttcacta ctacgcttag ctatccagag cggttctgtg
     1561 atgatgcgcc acaccggtaa gcgcggattg agcgaagaga gcgggtcctg aaacaccatc
     1621 tgcataatgc gttgtgagcc agaacggatg tactgcccgt ggctcggttg cagcatgccc
     1681 attaaaagct gtgcgagggt gcttttgccg cagcctgact cgccgacgat ccctaaggtt
     1741 tcaccacggc ggatctgtaa atcaatacca ttaatggcat gaacatgttc cgtagtttta
     1801 ccaagccagt ttttacgggc cgggaaattg atatggacgt cgcgtaacgt taataacgtg
     1861 tcagacactt atgacctcct gctgcggata ccaacaggcg cagcgctggt tgttgtcacc
     1921 acacgctgtc agcgccggga cgttttcaca ctgtgcacct gccgcatagc aacgatcgcg
     1981 aaaagcgcag ccttcaggca aatgggtgag gtttggtacc gtccctggaa tggcgggtaa
     2041 tagctggcgt ggtactccat gttctggtgc gcattgcagc aaaccaatgg tatacggatg
     2101 ccggggatga tggataacat ctgccgtcac gccgctttca attacgcttc cggcatacat
     2161 cacgtaaacg ctatcgcaca gttgcgacac cacggccata tcatggctga tgaacagaac
     2221 cgcagttcca ctggcgcggg ctttatgttt aagcaaacgc agtacctgca actgcaccgt
     2281 gacgtccagc gccgtagtcg gttcgtcggc aataatcaat tgcggctcgc aggagaatgc
     2341 cagcgcaatc attacccgct ggcgcatacc acctgaaagc tcaaacggat agcgcgacat
     2401 aacttccacg gcatccggga tttgcatctc ttccagcagg gcaatcgctt tagctctggc
     2461 ttcccgacga cttattggtt gatgatggcg gatcacgtcc atcatctgaa gacctattcg
     2521 aagtgtcgga ttgagggcgg tcatcggttc ctgaaagatc atcgccactc gtgcgccgcg
     2581 ccattgacga agctgttttt cccgagcgtt aagaacatcg tctcccagta gtgaaatctg
     2641 cccccgatgt acgcaataac tgcccgtcgg tagcagacgc ataatcagca ttgcggtgac
     2701 tgatttacct gagccggatt ctcccaccag accgacaatt tcaccgcggt taatctgcaa
     2761 ggacacattg ttgagcgcgt gaacatcacc gttaaaaccg gggaaactca aatgcagctg
     2821 ttgaatgtcc agaacgggtt gggtcatgac tgctttcctc ctgctttcgg gtcaagcaga
     2881 tcgcgaatac catcaccaaa gagattaaac ccaacggcgg taagcaaaat cgctgccccc
     2941 ggaaatgcgc aataccacca ctgatcgagt acatagttgc gaccatttgc taccatcgcg
     3001 ccccattcag cactcggttg ttgagcaccc aggccaataa atcccaacgt ggcggccatt
     3061 aaaatcgcgc taccgatatc cagcgatgcc tgcacgatca gcggcggcag ggagttacgt
     3121 aaaatatgcc agctgatcag atgccaacgc gacgcaccaa aggttttcgc cgcctgaaca
     3181 taggtatact ggcgtacaac taatgcttgc ccccgcgcca ggcgcacata aaagggaatt
     3241 cgcacaatag caatcgccag catggcgtta aataaactcg gcccgagagc ggcagccagt
     3301 gccattgtca gtaccaacga aggaatcgac agcataatgt ccatgatgcg catgatgatg
     3361 gcgtctgcgc gtccgccaag cacaccggat agacatccga gtagcgaacc aatcataccc
     3421 gcaatggcaa ccacgactaa tccggcgaga attgattgct gactgccgac cagtacgcgg
     3481 ctgaacagat cgcgtcccac ttcatcggtg ccaaaccagt gcgccgcaga aggcggcaaa
     3541 aggcgggcgg ttaaatcaat ggcgttggga tcatgcgtcg ccagccacgg tgaaaaaatc
     3601 atcatcagta gcattaatac aatgatgact gcgccggtca cggtgagcgg actgcctttc
     3661 agcatccata ccagttttgc accgttaaat cgcgtttgtt tttgtgggcg tacggcggac
     3721 gtttcctcgc ttagcatcat tcaccacctc cacgtccgat acgcggatca atccacaaat
     3781 agagcaaatc caccaccagg ttgaccagca cataagcaaa tgaaaccacg acggcaaatc
     3841 ccatcaccgc agggaagtcg agcgcctgta ttgatgtcac tacccatgcc cccattccgg
     3901 gccaggcaaa aacggtttcg gtgagcactg cgccatacaa caaatcgccc agcgccagac
     3961 ctaatacggt aatcgatggg atcaacgcat tgggtagcgc ataacataaa acgatatacc
     4021 agccgggcaa gccgctggcc cgggcggtac gaatgtagtc ttcactcaat tgttccagca
     4081 tcgctgagcg gatctggcgg gcgacaatcc ccaggtgaac aaacgccagc gttaatgccg
     4141 gtaagatgag atgttgcaac gcattgaaga agacttcacc gttgccttca agcaacgcat
     4201 cgagcagata aaagccggta acgtgcgttg gtggatccag ccagtcatca agccttccgc
     4261 cgccgggaag tatttgcaga tgaccataaa acagcacaat gacgcccagc ccaagccaga
     4321 atgcaggtgt ggatattccg gttatggcca tcagacggac aagatgatcc agccagcgat
     4381 tacgccagac ggcagagagt atgcccagtg ggatgccaat cagtagcgcc agcagcaggg
     4441 cgcaaaaggc cagttccagc gtcgccggga agaatatacg cagctcttcc agcaccggac
     4501 gcccggtacg aatggatgtc cccaggtcac catgaaacag gtcgctgacg tagcggtaaa
     4561 attgtacgta tagcggctgg tcgagcccca attgctggcg aatattttcc acgatggcat
     4621 tgctggcgcg gtcgccagcc agcaaccgcg ccggatcgcc ggggatcaga tgcgagataa
     4681 taaacgtaat cacgcagacg cccgccacca cgagcaccag cccccagcag cgttggcgta
     4741 aaatactcca gaaggtcacg ttatttactc atggtattga tattgaagac ctgttccagc
     4801 atgggattga acacaaagcc tttcacctct ttgttcatcg ccagttggta gtttttctgg
     4861 aacaggtaca cataagcagc gtcatcaatg acgattttct gtgcctgctg gtagtcccgg
     4921 gtacgctgcg tctggtcggt ggtcgcaagc gcattgcgca gtaacttatc gacctcactg
     4981 ttttcataga acgagcggtt gcctggcaga ccttttttgt ctgactcaaa ccagtaattc
     5041 ataaacatat acgggtcggc aaaatccgga ctccagttgc caatcgcaat gtcgtaatca
     5101 cctttaccca ctctgtcgcg catggtggcg ttcgccagct tttccagctt cacattgatg
     5161 cccagcttgt tgagactgga ttgtgtcgcc aaagcaatag gctcccagtt cggatcgtta
     5221 tcggagtaga gaaacgtcag gctggtgggt ttgctcgtca ctttatccca ttcggctttg
     5281 gctttcgttt cgtcatggtt gtattgcatt gccgtcgcat cgtagcccca catgccttcc
     5341 ggaatcgggc cgcgcatctg ttttccgtta ccactcagaa tgccgttaac catgccctga
     5401 taatcggtag accaggaaat ggcccgacgt agatccgcct gattaagagg cgctttgctg
     5461 ttattcagat acagataggt aacgcgcagt gacggatact ctgccacatt gactttattt
     5521 tcctgcttca gggcgttgag ttgatccacc ggcagcgcat cggcaatgtc aatgtcgcca
     5581 cgggagagct gcaggcgacg ggaggcactt tcaccgataa tttttaccga tactcgctta
     5641 aagttcggtt tattgccggg gtaatgcgga tttggcacca gaactaattg ctgacctttt
     5701 tgccagcttt tcagcataaa tggtccggaa ccggcggtat tttgcgcgag gaagccgcga
     5761 gcatcatccg ctgcatgttc ctttaagacc gccggattga taatggatgc accgtcattc
     5821 gccagcgtgt agaggaacgg tgcgaatggt tggctaaggg taaacttcac cgtatgttcg
     5881 tcgggagcat caatctttaa atctttggga aatgcttctg ctggcccctg gccgattttt
     5941 agtagccgct caaaagaaag ttttactgct tcggcagtga caggtgtgcc atcggcaaat
     6001 ttagcattat ctttcagggt gaacgtccac tctttttgat cgtcagacgc tttccagcta
     6061 cttgccagat cgccttcaac gtcggttgag cctttatcac cgtccgtttt gtactgaacc
     6121 agccgctgat aagacgggta ggtcaccgtc cagtcgttat tatctattgt taccgccggg
     6181 tcgagggttt gtggatcggc ggccttacca atcaccagca tatctttcgg tacggcggcg
     6241 tgcgaaaccg ggaaatttgt ggcaaggacg agcgcgagca atgtgggacg gaaacgatat
     6301 cgatctcttc atgacagttt cctgattaac tgacgtgctg tgtgccaggg gatataaaac
     6361 aagagaattg atcagcgagc agagggtaac tcgctgcctg gggtaattcg aagtgccacc
     6421 attcgctgga gataccgaca aaaccgccac cagtcattat cgcattcagc aacagccgat
     6481 tgcgctgagc ggcgggcggg acggaagggt gataggcatg ggagcgctcg tgcatttcat
     6541 cgaaccctgc gcccatatcg aggatgttcc cgtgctcatc acgaagcgtc aggtcgatcg
     6601 ccgtgccacg gctgtgatta gaaccgaccg tcacatcaac aacatattgc gggtctgggc
     6661 aggcttgcca caacatcgcc tgtgcttgtt gtgggcgata cgcatcgtaa atcaccagtt
     6721 gtaagcctga cagctgggcg atactgatac ttttcgccag cgcggtaatc gcatccttgt
     6781 gtagcagaca acgcgcttgc tgataaatag ctttacctgt gatgttatca gcgcaggcgt
     6841 atttcaattc gatctccaga tcagggaaga ttacggctaa atcaaccagt tcggtggtat
     6901 ccgacataaa cggttcctgt ataagacaaa aattgctgcg ctttccgctt atgcagatct
     6961 catgccatgc cgggataagc gccagaatgc tggcttaaag ttatattttt taacttttga
     7021 tcaacatttg tgcagcgtag tgcagttttc gtgcaagagg ggaagttaag gaaggaatct
     7081 cccggaatcg tagctgaaat cacagtattt aagtgacagt gtcaccttaa aggaaaaccc
     7141 gcgagtgcgg gcgagaggaa tttgtcagat tttcagcggt aacacgctgc tcatccagcc
     7201 tggaatttct tcggcgggaa gggggcggga aaagaaatat ccctgaataa cgcgacagtg
     7261 gatcttacgt agcatctcaa attgctcttt ggtttcgacc ccttccgcca cgacggttaa
     7321 attgaggctt tgcccaatgc tggtaatggc ttcaagtaag gccaggatgc gtttttccgt
     7381 cagacaacga tcgacaaaac ttttgtcaat tttgatttcc gttaccggaa gactgactaa
     7441 gcgggataat ccggaaaagc ccgtaccaaa atcatctacc gataagccca cgcccatatc
     7501 acgcaggatc tgaatgcgct taaagatttc ggtatcgtgt tccatcatca tgctttccgt
     7561 gatttctacc gtcagctggt ggccgtcaat accccaggcg tgcattgcat cagacacctg
     7621 attaggcagt tgattactgc gaaagtgcag tgccgacaag ttaacggaaa gcgccgggat
     7681 atgaatattc tggctacgcc attctgctaa ctgacggcaa gcttccgcga tgacccagcg
     7741 cccaatattt tcgatttcac caatctcttc tgcgagagga ataaaccgtg aagggggcac
     7801 atgaccatgc tggggatcgt gccagcgcgc aagggcttcg atgccgtaca gttcacccgt
     7861 ttctgcgaag atttgcggct ggtaaacaag tttcagttgg ttattgctaa tcgcttcttt
     7921 cagcgctgcg cctaaaacca aacgctcttt taccatttcg ttcatcgccg ggctgaagaa
     7981 ctgccagccg ttaccgccat tcttgcgaat ataatccatt gcattgtgag cagtggagag
     8041 caggtaatcg cggtttttac ctacgtcgta gctgatgcca atactcaagg taagcgggaa
     8101 gggtttatcg tcaatcatta tcggcttgct gaccacattc cgtagctcat cggcgatttg
     8161 ggtaatgtta ctgacgtcgt tttccaggct cacgaggaca aactgcgtac cttcgatacg
     8221 acagagatac tgatccggtt tgagtttttc acgaaagcga ttgaccactt ccagcaatgc
     8281 ctgatcggcc cacgcatagc caaggctatc aatcacatcc tgaatatggt caacaccgat
     8341 gagatacacc accggagaga cggctttgtc gaccaggtca tcgaggtaat tgtgcaggtt
     8401 attgcgattt ggcagaccgg tcatcggatc aaattggatg agttgttcaa tatgctggcg
     8461 gcttttttcc tgttccagcg ccagcgcggc catatgctga ctgatatctg ccacgcgttc
     8521 gataaaggcg ctggtttctg ctcctgacga ggttttaatt tgcaggatcc ccgcaggcgc
     8581 gccatcacgc tgacgaatgg tcgctgacca gctttgcgca ttttgaactt ctgcaccgtg
     8641 cgaagatgac gcccagtgta tcggcatccc gttgcgcagt gcgaacagcg aaacatgcga
     8701 ttcgttgaga acagattcga tgttacgaca aatgatttcc cccatttcat gaaatggcgg
     8761 gctgctgcac atggcggcga gaatattgcc ttcaagctgg cggatttgcc gttcttcggt
     8821 gatatccgag aaggtcatta ccaggttctg cagatgcgcg agcacgtcat aaaccgggct
     8881 gatagaggct ttaatccaga ttttttcacc ggtgcgcgtc aacagcagaa attcatcctg
     8941 atcgcgggcg gttttccata gcaactgttg taaacgaatg cggttatcgg cagggaattc
     9001 aggaatgttc aggagtgtat cgggctgcat accgctggct tcgctaatgc agtaaccaaa
     9061 catttcggta aatgcgcgat tgcactgcac aatatggcgt tccggatcga ggacaatcac
     9121 cggtcggtcg agatggtcaa cagcaataat caattgtcga gtctgttctt tttgcgccat
     9181 ttctacgctg gcatcccgta ccagcgccag gtaataaact ttcccctcgg cgctcacttt
     9241 cgatagcgca aaacgggtcc agattttact gccgtctttt ttctccagct gcagctcccg
     9301 actcatcccc tcgacacgcg ctttaccgcc ttcacggtta tgacgaatgt attcaggatg
     9361 cgcaggacgc aaatcccgcg gaatcagcat atcaatgtta ttgccaatga cttcttcacg
     9421 tttgtacccc cagagcttct ctgcggcggg gttgaaaaac atcacttcat cattttcgtt
     9481 aattaacacc gcacccatca tattttgctc aagggcgggg aaaaaaatgc catcggcggc
     9541 attatccgca tcggttagct tcatgattac ctctgcatcc tggcgcatct aaagactggc
     9601 tttccagagt tcaacacggt ttctacctcg tcttttggcg atatacagag cttcatcggc
     9661 tatttgaatg aggcgctcat agtcaggatg accattaaac atggcggcac cgatggaaag
     9721 tgagagggca atatcctcgc cgtttgcggc tttcagtttg gttttctcca cccgactgcg
     9781 aatacgttct gcggtacgta acgtttcgtt ttcagaagct tcagtcaaaa caatgataaa
     9841 ttcatcgccc ccgtagcgga aaacataatc actactgcgg acgttgtcat aaaaggcctg
     9901 agagacttta cgcagaattt catcgccagt gttatggccc cacgtatcgt tgatctcttt
     9961 gaatttatca acgtcaataa tcagcactga cagtggtgta ccggtccggt tggcatgggc
    10021 aatttcgcgt ttgaagatag tcggcaggaa acggcggtta agtaatttcg tcagtacatc
    10081 cataccgact tcgtggcgcg atacttcttc aaacaattca cgcagcaagg taataatctg
    10141 cgatacggta tttcttatct gtaatagaaa tttcacccgc aaacttctgt tattcaaatt
    10201 cctggtgtta cgcatggttt gattgaaaat accgtcgaaa tcctgaatca gacgggagat
    10261 atggcctact tcggcaatgc cgctaaaata atgtcgacct ttatggttaa accacaggcc
    10321 aaaatcagcc tggcttaaag gcaaactact gcctaaatca gaatccagca ggattttata
    10381 gataatatct atttcccatg aaagtattga ggctatttgc cgttcttttt cttcttcggc
    10441 gttttccagt aacgagaaga tacgatagtt ttcatcttcc tttgaggcac tactgtcact
    10501 aaaggtaaac gcgcgggtca tcacttccat agcgatatca atactgttaa tcgagaaatg
    10561 gtagacctga agtttttctg cggcagaata atccgaagag aagattaccg gatagaggat
    10621 ttttttcagc acccgaaacc ccatctcgac aatttctacc ggaattccta tgcgggcatg
    10681 cacttccgcg acggtatgct ggatttgtat tagcctttcg acatcgtcaa cctgggcaga
    10741 aagcacgtta ataatccagc gttccatcgc acttttcaac tgccgctcaa cttgttcatt
    10801 actcaagaat tcttcggcat gcgggtcgat gcggacaatt cgataaaact cgatactcag
    10861 ataatgagca tgcgcaaggg caatttctgc ggctttagca cgaatgagag gatctgcctg
    10921 ttcgacaagt ccggtccact catctttcat tcttttaaaa tacatctcca taattcacac
    10981 ccttataagg ctgggaaatc agacggaatc aaaacgcaac gtgcgagatc gactaactgc
    11041 accatattct cctgaaatat gaagatatac tgaaaagaaa taagcgactt aggacagttt
    11101 taatctacgc tactgttctt cag
//
LOCUS       DAPGWB010000148        10969 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.150, whole genome shotgun sequence.
ACCESSION   DAPGWB010000148 DAPGWB010000000
VERSION     DAPGWB010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10969
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.150"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            72..1214
                     /locus_tag="RHX79_003726"
     CDS             72..1214
                     /locus_tag="RHX79_003726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001327865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDV2198845.1"
                     /translation="MECDLLMIKIEKVINKNDLKAFIAFPSSLYPDDPNWIPPLFIER
                     NEHLSAKNPGTDHIIWQAWVAKKAGQIVGRITAQIDTLHRERYGEDTGHFGMIDAIDD
                     PQVFAALFGAAEAWLKSQGASKISGPFSLNINQESGLLIEGFDTPPCAMMPHGKPWYA
                     AHIEQLGYHKGIDLLAWWMQRTDLTFSPALKKLMDQVRKKVTIRCINRQRFAEEMQIL
                     REIFNSGWQHNWGFVPFTEHEFATMGDQLKYLVPDDMIYIAEIDSAPCAFIVGLPNIN
                     EAIADLNGSLFPFGWAKLLWRLKVSGVRTARVPLMGVRDEYQFSRIGPVIALLLIEAL
                     RDPFARRKIDALEMSWILETNTGMNNMLERIGAEPYKRYRLYEKQI"
     gene            complement(1221..1985)
                     /gene="glcC"
                     /locus_tag="RHX79_003727"
     CDS             complement(1221..1985)
                     /gene="glcC"
                     /locus_tag="RHX79_003727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GlcC"
                     /protein_id="HDV2198846.1"
                     /translation="MKDERRPICEVVAESIERLIIDGVLKVGQPLPSERRLCEKLGFS
                     RSALREGLTVLRGRGIIETAQGRDSRVARLNRVQDTSPLIHLFSTQPRTLYDLLDVRA
                     LLEGESARLAATLGTQADFVVITRCYEKMLAASENNKDISLIEHAQLDHAFHLAICQA
                     SHNQVLVFTLQSLTDLMFNSVFASVNNLYHRPQQKKQIDRQHARIYNAVLQRLPHVAQ
                     RAARDHVRTVKKNLHDIELEGHHLIRSAVPLEMNLS"
     gene            2236..3735
                     /gene="glcD"
                     /locus_tag="RHX79_003728"
     CDS             2236..3735
                     /gene="glcD"
                     /locus_tag="RHX79_003728"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcD"
                     /protein_id="HDV2198847.1"
                     /translation="MSILYEERLDGALPDVDRTSVLMALREHVPGLEILHTDEEIIPY
                     ECDGLSAYRTRPLLVVLPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGV
                     LLVMARFKEILDINPVGRRARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNV
                     AENAGGVHCLKYGLTVHNLLKIEVQTLDGEALTLGSDALDSPGFDLLALFTGSEGMLG
                     VTTEVTVKLLPKPPVARVLLASFDSVEKAGLAVGDIIANGIIPGGLEMMDNLSIRAAE
                     DFIHAGYPVDAEAILLCELDGVESDVQEDCERVNDILLKAGATDVRLAQDEAERVRFW
                     AGRKNAFPAVGRISPDYYCMDGTIPRRALPGVLEGIARLSQQYDLRVANVFHAGDGNM
                     HPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFNSDEI
                     TTFHAVKAAFDPDGLLNPGKNIPTLHRCAEFGAMHVHHGHLPFPELERF"
     gene            3735..4787
                     /gene="glcE"
                     /locus_tag="RHX79_003729"
     CDS             3735..4787
                     /gene="glcE"
                     /locus_tag="RHX79_003729"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcE"
                     /protein_id="HDV2198848.1"
                     /translation="MLRECDYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPVTGQT
                     LDVRCHRGIVNYDPTELVITARAGTPLVAIEAALESAGQMLPCEPPHYGEEATWGGMV
                     ACGLAGPRRPWSGSVRDFVLGTRIITGAGKHLRFGGEVMKNVAGYDLSRLMAGSYGCL
                     GVLTEISMKVLPRPRASLSLRREISLQEAMNEIAQWQLQPLPISGLCYFDNALWIRLE
                     GGEGSVKAARELLGGEEVAGQFWQQLREQQLPFFSLPGTLWRISLPSDAPMMDLPGEQ
                     LIDWGGALRWLKSTAEDNQIHRIARNAGGHATRFSAGEGGFAPLSAPLFRYHQQLKQQ
                     LDPCGVFNPGRMYAEL"
     gene            4798..6021
                     /gene="glcF"
                     /locus_tag="RHX79_003730"
     CDS             4798..6021
                     /gene="glcF"
                     /locus_tag="RHX79_003730"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcF"
                     /protein_id="HDV2198849.1"
                     /translation="MQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDE
                     LDGPRGRIYLIKQVLEGNEVTLKTQEHLDRCLTCRNCETTCPSGVRYHNLLDIGRDIV
                     EQKVKRPLPERMLREGLRQVVPRPAVFRALTQVGLVLRPFLPEQVRAKLPAETVKAKP
                     RPPLRHKRRVLMLEGCAQPTLSPNTNAATARVLDRLGISVMSANEAGCCGAVDYHLNA
                     QEKGLARARNNIDAWWPAIEAGAEAILQTASGCGAFVKEYGQMLKNDALYADKARQVS
                     ELAVDLVELLREEPLEKLAIRGDKKLAFHCPCTLQHAQKLNGEVEKVLLRLGFTLTDV
                     PDSHLCCGSAGTYALTHPDLARQLRDNKMNALESGKPEMIVTANIGCQTHLASAGRTS
                     VRHWIEIVEQALEKE"
     gene            6026..6430
                     /locus_tag="RHX79_003731"
     CDS             6026..6430
                     /locus_tag="RHX79_003731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein GlcG"
                     /protein_id="HDV2198850.1"
                     /translation="MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLAL
                     SRMDDCAPIAAYISQEKARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVV
                     VDGQIIGAVGVSGLTGAQDAQVAKAAAAVLAK"
     gene            6452..8623
                     /gene="glcB"
                     /locus_tag="RHX79_003732"
     CDS             6452..8623
                     /gene="glcB"
                     /locus_tag="RHX79_003732"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HDV2198851.1"
                     /translation="MSQTITQGRLRIDANFKRFVDEEVLPGTGLDAAAFWRNFDEIVH
                     DLAPENRQLLAERDRIQAALDEWHRSNPGPVKDKAAYKSFLRELGYLVPQPERVTVET
                     TGIDSEITSQAGPQLVVPAMNARYALNAANARWGSLYDALYGSDIIPQEGAVVSGYDP
                     QRGEQVIAWVRRFLDESLPLENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVG
                     YRGDAAALTCILLKNNGLHIELQIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVA
                     AVDAEDKILLYRNLLGLMQGTLQEKMEKNGRQIVRKLNDDRHYTAADGSEISLHGRSL
                     LFIRNVGHLMTIPVIWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPK
                     MHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFIN
                     TGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGKGM
                     WAMPDLMADMYSQKGDQLRAGANTAWVPSPTAATLHALHYHQTNVQSVQANIAQTEFN
                     AEFEPLLDDLLTIPVAENANWSVEEIQQELDNNVQGILGYVVRWVEQGIGCSKVPDIH
                     NVALMEDRATLRISSQHIANWLRHSILTKEQVQASLENMAKVVDQQNADDPAYRPMAG
                     NFANSCAFKAASDLIFLGVKQPNGYTEPLLHAWRLREKESH"
     gene            8979..10661
                     /gene="glcA"
                     /locus_tag="RHX79_003733"
     CDS             8979..10661
                     /gene="glcA"
                     /locus_tag="RHX79_003733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate permease GlcA"
                     /protein_id="HDV2198852.1"
                     /translation="MVTWTQMYMPMGGLGLSALVALIPIIFFFVALAVLRLKGHVAGA
                     ITLILSILIAIFAFKMPIDMAFAAAGYGFIYGLWPIAWIIVAAVFLYKLTVASGQFDI
                     IRSSVISITDDQRLQVLLIGFSFGALLEGAAGFGAPVAITGALLVGLGFKPLYAAGLC
                     LIANTAPVAFGALGVPILVAGQVTGIDPFHIGAMAGRQLPFLSVLVPFWLVAMMDGWK
                     GVKETWPAALVAGGSFAVTQFFTSNYIGPELPDITSALVSIVALALFLKVWRPKNTET
                     AISMGQSAGAMVVNKPSSGGPVPSEYSLGQIIRAWSPFLILTVLVTIWTMKPFKALFA
                     PGGAFYSLVINFQIPHLHQQVLKAAPIVAQPTPMDAVFKFDPLSAGGTAIFIAAIISI
                     FILGVGIKKGIGVFAETLISLKWPILSIGMVLAFAFVTNYSGMSTTLALVLAGTGVMF
                     PFFSPFLGWLGVFLTGSDTSSNALFGSLQSTTAQQINVSDTLLVAANTSGGVTGKMIS
                     PQSIAVACAATGMVGRESELFRYTVKHSLIFASVIGIITLLQAYVFTGMLVS"
BASE COUNT         2565 a         2753 c         3056 g         2595 t
ORIGIN      
        1 gattattaag gtgtcgttcg ttgctgttgc aacctgtttt tcaccgttaa ttatttgtta
       61 tccacagaga tatggaatgc gatctgctga tgattaaaat tgaaaaagta attaataaaa
      121 atgaccttaa ggcatttatc gcttttccgt catcacttta tcccgacgat ccaaactgga
      181 tacccccttt attcatagaa cgcaacgagc atttgtctgc gaaaaatccg gggacggacc
      241 atatcatctg gcaggcgtgg gtggcaaaaa aagcggggca gatagttggg cgtattaccg
      301 cgcaaataga taccttgcac cgtgagcgtt acggtgaaga taccggtcat ttcggcatga
      361 ttgacgccat tgatgatccg caggtttttg ccgcgttgtt tggcgcagcg gaagcgtggt
      421 tgaagtcaca aggtgcaagt aagatcagcg gtcctttcag cctgaatatc aatcaggaaa
      481 gcggattact gattgaaggt tttgacacac caccctgtgc gatgatgcca cacggcaaac
      541 cgtggtatgc cgcgcatatt gaacaactgg gttatcacaa aggcattgat ttactggcgt
      601 ggtggatgca gcgaaccgat ctcactttct ctccggcgct aaaaaaactg atggatcagg
      661 tgcgcaaaaa ggtgaccatt cgctgcatca atcgtcagcg gtttgccgaa gaaatgcaga
      721 tcctgcgtga gattttcaac tctggctggc agcacaactg gggatttgtg ccgtttaccg
      781 aacatgaatt cgcgaccatg ggcgatcaac ttaaatatct ggtgccggac gatatgatct
      841 atatcgctga gattgattct gcaccctgcg cgtttattgt cggcttgccg aacatcaacg
      901 aggcgattgc cgatctgaac ggatcgctct ttcccttcgg ctgggcaaaa ttgctgtggc
      961 gtttgaaagt cagcggtgtg cgaactgcgc gagtaccgct gatgggcgtg cgcgacgagt
     1021 atcagttcag ccgcatcggc ccggtgattg cgctgttatt gattgaagcc ttacgcgatc
     1081 cgtttgcccg ccggaagatc gatgcgctgg agatgtcatg gatcctcgaa accaatacag
     1141 gcatgaataa catgctggaa cgcattgggg cggagccgta caagcgttac cgattgtatg
     1201 aaaagcagat ttaataccag ctaactcagg ttcatctcca gcggcaccgc cgagcgaatc
     1261 aaatggtggc cttccagctc gatatcgtgg agattctttt tcacggtccg cacatgatcg
     1321 cgtgctgcgc gctgggcgac gtgcggcagc cgctgcaaca ccgcgttgta gatcctcgca
     1381 tgctggcgat cgatctgctt tttttgctgt ggtcgatggt agagattatt tacgctggca
     1441 aacactgaat taaacatcag atcggtcaat gattgcagcg taaacaccag cacctgattg
     1501 tgagaagcct gacaaatggc gagatggaaa gcgtgatcca actgcgcatg ttcgatcagc
     1561 gaaatatctt tgttgttctc actggcggcg agcatttttt cataacagcg ggttatcaca
     1621 acaaaatcag cctgcgttcc cagcgttgcc gccagccttg ccgattcgcc ctccagtaat
     1681 gcgcgaacgt cgagcagatc gtacagcgtt cgcggctgcg tactgaacag atggatcagc
     1741 gggctggtgt cctgcacccg attaagccgt gcgacacgag aatcgcgacc ctgcgccgtc
     1801 tcaataatcc cgcgcccgcg cagcacggtc agcccttcac gcagtgcgga gcgtgagaag
     1861 ccgagctttt cacacagtcg acgttccgag ggaagtggct gaccgacctt cagtacgccg
     1921 tcgataatta accgttcgat actctctgca accacttcgc aaatagggcg acgttcatct
     1981 ttcattcccg gacctcgtgc acaggtagga ccaatttttc tgttcttaac tcgcaaaaca
     2041 cgcacatcac gtaagtgatt atgttacatc aatttaacat tgagttaacc aaggcaaggt
     2101 cacagagctg gaaaaaaaat ggtctgaccg gtagctaaag agatagacga aaacgaaaag
     2161 cccgcttaat aactgttcac agaagcagcg cgcaaaaatc agctgccaca caacacaaca
     2221 aagcgaagcc tactcatgag catcttgtac gaagagcgtc ttgatggcgc tttacccgat
     2281 gtcgaccgca catcggtact gatggcactg cgtgagcatg tccctggact tgagatcctg
     2341 cataccgatg aggagatcat tccttacgag tgtgacgggt tgagcgcgta tcgcacgcgt
     2401 ccattactgg ttgttctgcc taagcaaatg gaacaggtga cagcgattct tgctgtctgc
     2461 catcgcctgc gtgtaccggt ggtgacccgt ggtgcaggca ccgggctttc tggtggcgcg
     2521 ctgccgctgg aaaaaggtgt gttgttggtg atggcgcgct ttaaagagat cctcgacatt
     2581 aaccccgttg gtcgccgcgc gcgcgtgcag ccaggcgtgc gtaacctggc gatctcccag
     2641 gccgttgcac cgcataatct ctactacgca ccggaccctt cctcacaaat cgcctgttcc
     2701 attggcggca acgtggcaga aaatgccggc ggcgtccact gcctgaaata tggtctgacc
     2761 gtacataacc tgctgaaaat tgaagtgcaa acgctggacg gcgaggcgct gacgctggga
     2821 tcggacgcgc tggattcacc tggttttgac ctgctggcgc tgttcaccgg atcggaaggt
     2881 atgctcggcg tgaccaccga agtgacggta aaactgctgc cgaagccgcc cgtggcgcgg
     2941 gttctgttag ccagctttga ctcggtagaa aaagccggac ttgcagttgg tgacatcatc
     3001 gccaatggca ttatccccgg cgggctggag atgatggata acctgtcgat ccgcgcggcg
     3061 gaagatttta ttcatgccgg ttatcccgtc gacgccgaag caattttgtt atgcgagctg
     3121 gacggcgtgg agtctgacgt acaggaagac tgcgagcggg ttaacgacat cttgttgaaa
     3181 gcgggcgcga ctgacgtccg tctggcacag gacgaagcag agcgcgtacg tttctgggcc
     3241 ggtcgcaaaa atgcgttccc ggcggtagga cgtatctccc cggattacta ctgcatggat
     3301 ggcaccatcc cgcgtcgcgc cctgcctggc gtactggaag gcattgcccg tttatcgcag
     3361 caatatgatt tacgtgttgc caacgtcttt catgccggag atggcaacat gcacccgtta
     3421 atccttttcg atgccaacga acccggtgaa tttgcccgcg cggaagagct gggtgggaag
     3481 atcctcgaac tctgcgttga agttggcggc agcatcagtg gggaacatgg catcgggcga
     3541 gaaaaaatca atcaaatgtg cgcccagttc aacagcgatg aaatcacgac cttccatgcg
     3601 gtcaaggcgg cgtttgaccc cgatggtttg ctgaaccctg ggaaaaacat tcccacgcta
     3661 caccgctgtg ctgaatttgg tgccatgcat gtgcatcacg gtcatttacc tttccctgaa
     3721 ctggagcgtt tctgatgcta cgcgagtgtg attacagcca ggcgctgctg gagcaggtga
     3781 atcaggcaat tagcgataaa acgccgctgg tgattcaggg cagcaatagc aaagcctttt
     3841 taggtcgccc tgtcaccggg caaacgctgg atgtgcgttg tcatcgcggc attgttaatt
     3901 acgacccgac cgagctggtg ataaccgcgc gtgccggaac gccgctggtg gcgattgaag
     3961 cggcgctgga gagcgccggg caaatgcttc cctgcgagcc gccgcattat ggtgaagaag
     4021 ccacctgggg tgggatggtc gcctgcgggc tggcggggcc gcgtcgcccg tggagcggtt
     4081 cggtccgcga ttttgtcctc ggcacgcgca tcattaccgg cgctggaaaa catctgcgtt
     4141 ttggtggcga agtgatgaaa aacgttgccg gatacgatct ctcacggtta atggccggaa
     4201 gctacggttg tcttggcgtg ctcactgaaa tctcgatgaa agtgttaccg cgaccgcgcg
     4261 cctccctgag cctgcgtcgg gaaatcagcc tgcaagaagc catgaacgaa atcgcccagt
     4321 ggcaactcca gccgctacct attagtggct tatgttactt cgacaatgcg ttgtggatcc
     4381 gccttgaggg cggcgaagga tcggtaaaag cggcgcgtga actgctgggg ggcgaagagg
     4441 ttgcgggtca gttctggcag caattgcgtg aacaacaact gccgttcttc tcgttaccag
     4501 gtaccttatg gcgcatttca ttacccagcg atgcgccgat gatggattta cccggcgagc
     4561 aactgatcga ctggggcgga gcgttacgct ggctgaaatc gacagccgag gacaatcaaa
     4621 tccatcgcat cgcccgcaac gctggcggtc atgcgacccg ctttagtgcc ggagagggtg
     4681 gctttgcccc gctatcggct cctttattcc gctatcacca gcagcttaaa cagcagctcg
     4741 acccttgcgg cgtgtttaac cccggtcgca tgtacgcgga actttgagga gcaggctatg
     4801 caaacccaat taactgaaga gatgcggcag aacgcgcgcg cgctggaagc cgacagcatc
     4861 ctgcgcgcct gtgttcactg cggattttgt accgcaacct gcccaaccta tcagcttctg
     4921 ggcgatgaac tggacgggcc gcgcgggcgc atctatctga ttaaacaggt gctggaaggc
     4981 aacgaagtca cgcttaaaac acaggagcat ctcgatcgct gcctcacttg ccgcaattgt
     5041 gaaaccacct gtccttctgg tgtgcgctat cacaatttgc tggatatcgg gcgtgatatt
     5101 gtcgagcaga aagtgaaacg cccactgccg gagcgaatgc tgcgcgaagg attgcgccag
     5161 gtagtgccgc gtccggcggt cttccgtgcg ctgacgcagg tagggctggt gctgcgaccg
     5221 tttttaccgg aacaggtcag agcaaaactg cctgctgaaa cggtgaaagc taaaccgcgt
     5281 ccgccgctgc gccataagcg tcgggtttta atgctggaag gctgcgccca gcctacgctt
     5341 tcgcccaaca ccaacgcggc aactgcgcga gtgctggatc gtctggggat cagcgtcatg
     5401 tcagctaacg aagcaggctg ttgtggcgcg gtggactatc atcttaatgc gcaggagaaa
     5461 gggctggcac gggcgcgcaa taatattgat gcctggtggc ccgcgattga agcaggtgcc
     5521 gaggcaattt tgcaaaccgc cagcggttgc ggcgcgttcg tcaaagagta tgggcagatg
     5581 ctgaaaaacg atgcgttata tgccgataaa gcgcgtcaag tcagtgaact ggcggtcgat
     5641 ttagtcgaac ttctgcgcga ggaaccgctg gaaaaactgg caattcgcgg cgataaaaaa
     5701 ctggccttcc actgcccgtg taccctgcaa catgcgcaaa agctgaacgg cgaagtggaa
     5761 aaagtgttac ttcgtcttgg atttacctta acggacgttc ccgacagcca tctgtgctgc
     5821 ggttcagcgg gaacatatgc gttaacgcat cccgatctgg cacgccagct gcgggataac
     5881 aaaatgaatg cgctggaaag cggcaaaccg gaaatgatcg tcaccgccaa cattggttgc
     5941 cagacgcatc tggcgagcgc cggtcgtacc tctgtgcgtc actggattga aattgtagaa
     6001 caagcccttg aaaaggaata acaaaatgaa aactaaagtc attcttagcc agcaaatggc
     6061 gagtgcaatt attgccgcag gtcaggaaga ggcgcagaaa aataactggt cggtttccat
     6121 tgctgttgcc gatgacggcg gtcatctgct ggcgttaagt cgcatggacg attgcgcgcc
     6181 gattgcggct tacatctccc aggagaaagc gcgtaccgcc gcgctggggc gtcgtgaaac
     6241 taagggctat gaagagatgg tgaacaacgg acgtaccgcg ttcgtgactg cgccgttatt
     6301 aacgtcgctg gaaggcggcg taccggttgt tgttgatggg caaattattg gtgccgtggg
     6361 cgtttctggt ttaaccggag cacaggatgc gcaggtcgcg aaagcggcag cagcggtgtt
     6421 ggcgaaataa gcgaaaacga ggagataaac aatgagtcaa accataaccc agggccgttt
     6481 acgcattgac gccaatttta aacgttttgt ggatgaagaa gttttaccgg gaacagggct
     6541 ggacgctgcg gcgttctggc gcaattttga tgagatcgtt cacgatctgg caccagaaaa
     6601 tcgtcagttg ctggcagaac gcgatcgcat tcaggcggcg cttgatgagt ggcatcgcag
     6661 caatccgggg ccggtaaaag ataaagcggc ctataaatct ttcctgcgtg aactgggcta
     6721 cctggtgccg caaccggagc gcgtgacggt ggaaaccacg ggcattgaca gcgaaatcac
     6781 cagtcaggcg gggccacagc tggtggttcc ggcaatgaac gcccgctacg cgctgaacgc
     6841 ggcgaacgct cgctggggct cactgtacga tgcgttatac ggcagcgaca tcatcccgca
     6901 ggaaggggcg gtggtcagcg gctacgatcc gcaacgcggt gagcaggtta tcgcctgggt
     6961 tcggcgtttc ctcgatgaat ctctaccgct ggaaaacggc agctatcagg atgtggtggc
     7021 gtttaaggtg gtcgataaac aattacgcat ccagttgaaa aatggtaaag aaaccacgtt
     7081 acgtaccccg gcgcagtttg tcggttaccg tggcgatgcc gctgcgctga cctgcatttt
     7141 gctgaaaaat aacggcctgc atattgaact gcaaattgat gccaacgggc ggattggcaa
     7201 agacgatccg gcgcacatca acgatgttat cgtcgaagct gctatcagta ccattctcga
     7261 ctgcgaagat tcggtcgcgg cggttgatgc ggaagataaa atcctgctgt accgcaatct
     7321 gctgggcctg atgcagggga ctctgcaaga gaaaatggag aaaaacggtc gacaaatcgt
     7381 gcgtaaactg aatgacgatc gtcattacac cgccgccgat ggctctgaaa tttctctgca
     7441 cggacgctcg ctgctgttta tccgcaacgt gggtcatttg atgaccattc ctgtgatttg
     7501 ggacagcgaa ggcaatgaaa tcccggaagg cattcttgat ggcgtcatga ctggcgcgat
     7561 cgccctctat gatttaaaag tgcagaaaaa ctcgcgcact ggcagcgtct atattgtgaa
     7621 accgaaaatg cacggtccgc aggaagtggc gttcgccaac aaactgttta cccgcattga
     7681 gacaatgctc ggtatggcac cgaataccct gaaaatgggc attatggatg aagaacgtcg
     7741 gacctcgctg aacttgcgta gctgtatcgc tcaggcgcgc aatcgcgtgg cgttcatcaa
     7801 taccggtttc ctcgaccgta ccggcgatga aatgcattcg gtgatggaag ctggcccgat
     7861 gctgcgtaaa aaccagatga aatcgacgcc gtggatcaaa gcctacgagc gtaataacgt
     7921 gctttccggt ctgttctgtg ggctgcgcgg taaagcgcaa attggtaaag gcatgtgggc
     7981 aatgccggac ctgatggcag acatgtacag ccagaagggc gaccaactgc gtgccggggc
     8041 aaacacagcc tgggttccgt caccaaccgc tgctacgctc catgcgctgc actaccacca
     8101 aaccaacgta cagagcgtgc aagccaacat tgcccagacc gagttcaatg ctgaatttga
     8161 accgctgctg gacgatctgc tgactattcc ggtggctgaa aacgctaact ggtcggtgga
     8221 agagatccaa caagagctgg ataacaacgt gcaggggatt ctggggtacg tggtgcgctg
     8281 ggtggagcag gggattggtt gttcaaaagt tccggatatt cacaatgtgg cgctgatgga
     8341 agaccgcgca acgctgcgta tctccagcca gcatatcgcc aactggttac gtcacagtat
     8401 tctgaccaaa gaacaggtgc aggcgtcgct ggagaatatg gcgaaagtgg ttgatcagca
     8461 aaacgctgac gatccggctt atcgtccgat ggcggggaat ttcgctaact cgtgtgcttt
     8521 taaagctgcc agcgatttaa tcttcctcgg cgtgaaacag ccaaacggct ataccgaacc
     8581 gttattacac gcctggcgtt tacgcgaaaa agaaagtcat taatagcgtc aaaaaaagcc
     8641 ccggcaagtt ttattgtcgg ggctatgata gtaactgcgg tagtacattt atcccggaaa
     8701 taaccggagc gattatcagg gtttaacaat attaaatacc cgtagcgcat tactagcggg
     8761 cctataacaa caatatggac atcttaacga tactctgcgc ctgcgtgtgc agaacagaaa
     8821 cccttacccg atatacttgt tatgccagag gtagcaattg cgttagcggc gtactgttgc
     8881 tgtaaagtat aacgcctata ttttacagtt cagtcctctt ttgcttatta caaccttaag
     8941 tatatcaagc atataaagat aataagagac tgaacaatat ggttacctgg acccaaatgt
     9001 atatgccgat gggaggactg gggctatccg ctctggtcgc cctgatcccg ataatattct
     9061 tcttcgttgc actcgcggta ttacgtctga aaggacatgt cgctggagca ataaccctta
     9121 tattatctat cctgattgca atattcgcct ttaaaatgcc gattgatatg gcttttgctg
     9181 ctgcgggcta tggctttatt tatggattat ggcctattgc gtggattatt gtcgcggcgg
     9241 tgttcctcta taaattaacc gttgccagcg gtcagttcga tattatccgc agctcggtta
     9301 tctccatcac cgacgatcag cgtttgcagg tgttactgat tggtttctcc tttggtgcgt
     9361 tactggaagg agcggctggc tttggtgcgc cggtggcgat taccggtgcg ctgctggtgg
     9421 gcctgggctt caaaccgtta tacgcggcgg ggctgtgtct gattgccaac actgcgccag
     9481 tggcgtttgg tgcgttgggc gtgccgattc tggtcgccgg tcaggtaacg ggaatcgatc
     9541 cgttccacat tggcgcaatg gcgggacgtc agttaccgtt cctgtcggtt cttgtgccgt
     9601 tctggctggt agcaatgatg gacggctgga aaggggtgaa agagacgtgg ccagcggcgc
     9661 tggttgctgg gggaagcttc gctgtcactc agttctttac ctctaactat attggtccgg
     9721 aactgccgga tattacttcg gcgctggtga gtatcgtcgc actcgcttta ttccttaaag
     9781 tctggcgacc gaaaaatacc gaaacggcaa tcagcatggg acaatccgca ggtgcgatgg
     9841 tggtaaataa gccatcttct ggcggtcccg tgccttcaga atatagtctg gggcaaatca
     9901 ttcgtgcgtg gtcaccgttt ttaatcttaa cggtgctggt caccatctgg accatgaagc
     9961 cgtttaaagc gttatttgct ccgggcggcg cgttttattc actggtgatt aatttccaga
    10021 tccctcattt gcatcaacaa gtgttgaaag cggcacccat tgtcgcccaa ccaacgccaa
    10081 tggatgcggt gtttaaattc gaccctctct cggctggcgg caccgctatt tttattgcgg
    10141 cgattatctc tatcttcatc ctcggcgtgg gcatcaagaa aggtattggc gtctttgccg
    10201 aaacgctaat tagtctgaag tggccgatat tgtcgattgg catggtgctg gcgttcgcct
    10261 tcgtcaccaa ctattccggc atgtccacca cgctggcgct ggtactggca ggtacaggcg
    10321 tgatgttccc gttcttctca ccgtttctcg gctggctggg cgtattcctt accggctcgg
    10381 acacctcctc taacgccctg tttggttcac tgcaatcgac cacggcgcag caaatcaacg
    10441 tctctgacac tctgctggtg gcagcaaata ccagcggcgg cgtaactggc aagatgatct
    10501 ccccgcaatc tatcgccgtg gcttgcgccg cgacgggcat ggtgggccga gaatctgaac
    10561 tgttccgcta caccgtgaag cacagtctga tttttgccag cgttatcggc attatcaccc
    10621 tgctgcaggc gtatgtgttt accgggatgt tagtctcgta aatcaataaa gccggatgat
    10681 cgttaatatc atccggcttc atttacatta tgctgtctta ttaattgaaa attatttctc
    10741 gctttattat ccatgcagca ataatgtttt gcgttcagat aacctgctaa ataattaaga
    10801 gcgtgagaac atctattttt ttatcacgca aaacaagtct gtattaatta tgttcgcttg
    10861 atgagcaaac accgttctat ctgttgcttt tgcaatctta atcgttaaga ctaccaacaa
    10921 atttatatag ttacgttgtg aaatgttgtt aattttttgt ttattgaaa
//
LOCUS       DAPGWB010000149        10897 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.151, whole genome shotgun sequence.
ACCESSION   DAPGWB010000149 DAPGWB010000000
VERSION     DAPGWB010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10897
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.151"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            51..812
                     /gene="adiY"
                     /locus_tag="RHX79_003734"
     CDS             51..812
                     /gene="adiY"
                     /locus_tag="RHX79_003734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator AdiY"
                     /protein_id="HDV2198853.1"
                     /translation="MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNI
                     IDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAA
                     QHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYMLRNCVSDSVYQIIESDIH
                     KDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQ
                     SCGYNSTSYFISVFKDFYGMTPLHYVSQHRERTVA"
     gene            949..2286
                     /gene="adiC"
                     /locus_tag="RHX79_003735"
     CDS             949..2286
                     /gene="adiC"
                     /locus_tag="RHX79_003735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine/agmatine antiporter"
                     /protein_id="HDV2198854.1"
                     /translation="MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIY
                     GWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNI
                     AMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI
                     PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVK
                     NPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGA
                     IVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILM
                     TIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTT
                     IAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDVPISKD"
     gene            2390..4033
                     /gene="eptA"
                     /locus_tag="RHX79_003736"
     CDS             2390..4033
                     /gene="eptA"
                     /locus_tag="RHX79_003736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase EptA"
                     /protein_id="HDV2198855.1"
                     /translation="MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDS
                     LHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDR
                     SMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGAN
                     ILVSVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVR
                     IGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTA
                     SCGTATAVSVPCMFSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACD
                     RVPHQNITALNLPGQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNR
                     YPPQFRKFTPTCDTNEIQICSKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSL
                     VYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQ
                     TQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSE"
     gene            4030..4698
                     /gene="basR"
                     /locus_tag="RHX79_003737"
     CDS             4030..4698
                     /gene="basR"
                     /locus_tag="RHX79_003737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BasR"
                     /protein_id="HDV2198856.1"
                     /translation="MKILIVEDDTLLLQGLILAAQTEGYACDGVTTARMAEQSLEAGH
                     YSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKP
                     FALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSR
                     LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVA
                     NEEN"
     gene            4699..5799
                     /gene="pmrB"
                     /locus_tag="RHX79_003738"
     CDS             4699..5799
                     /gene="pmrB"
                     /locus_tag="RHX79_003738"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PmrB"
                     /protein_id="HDV2198857.1"
                     /translation="MNLMHFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQI
                     QLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQ
                     KELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTP
                     LAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLE
                     DVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGS
                     NIMIKLQEDGGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQL
                     HHGQFFLQNRQETSGTRAWVRLKKDQNVANQI"
     gene            complement(5775..5864)
                     /gene="pmrR"
                     /locus_tag="RHX79_003739"
     CDS             complement(5775..5864)
                     /gene="pmrR"
                     /locus_tag="RHX79_003739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxT activity modulator PmrR"
                     /protein_id="HDV2198858.1"
                     /translation="MKNRVYESLTTVFSVLVVSSFLYIWFATF"
     gene            complement(5976..7478)
                     /gene="proP"
                     /locus_tag="RHX79_003740"
     CDS             complement(5976..7478)
                     /gene="proP"
                     /locus_tag="RHX79_003740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709830.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline transporter ProP"
                     /protein_id="HDV2198859.1"
                     /translation="MLKRKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVY
                     GFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAIT
                     IVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRK
                     RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLR
                     HALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYY
                     MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVA
                     LFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAA
                     FNISVLVAGLTPTLAAWLVESSQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGAT
                     PAASDIQEAKEILVEHYDNIEQKIDNIDHEIADLQAKRTRLVQQHPRIDE"
     gene            complement(7742..8620)
                     /locus_tag="RHX79_003741"
     CDS             complement(7742..8620)
                     /locus_tag="RHX79_003741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjcZ-like family protein"
                     /protein_id="HDV2198860.1"
                     /translation="MTKTLLDGPGRVLESVYPRFLVDLAQGDDARLPQAHQQQFRERL
                     MQELLARVQLQTWTNGGMLNAPLSLRLTMVEKLASMLDPGHLALTQIAQHLALLQKMD
                     HRQHSAFPELPQQIAALYEWFSARCRWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYN
                     AWSLPGRCFIVLEELRWGAFGDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTR
                     HYYHQWFASSTVPTGGDHADFLSWLGKWTTADKQPVCWSVTQRWQTVALGMPRLCSAQ
                     RLAGAMVEEIFSVNLA"
     gene            complement(8617..10845)
                     /gene="crfC"
                     /locus_tag="RHX79_003742"
     CDS             complement(8617..10845)
                     /gene="crfC"
                     /locus_tag="RHX79_003742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clamp-binding protein CrfC"
                     /protein_id="HDV2198861.1"
                     /translation="MYTQTLYELSQEAERLLQLSRQQLQLLEKMPLSVPGDDAPQLAL
                     PWSQPNIAERHAMLNNELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPM
                     TALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTDVLEIDKDMRAL
                     MQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVE
                     FVHLAGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISD
                     EEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTLMKGCITPQQIFPVS
                     SMWGYLANRARHELANNGKLPAPEQQRWVEDFAHAALGRRWRHADLADLEHIRHAADQ
                     LWEDSLFAQPIQALLHAAYANASLYALRSAAHKLLNYAQQAREYLDFRAHGLNVACEQ
                     LRQNIHQVEESLQLLQLNQAQVSGEIKHEIELALTSANHFLRQQQDALNAQLAALFQD
                     DSEPLSEMRTRCETLLQTAQNTISRDFTLRFAELESTLCRVLTDVIRPIEQQVKMELS
                     ESGFRPGFHFPVFHGVVPHFNTRQLFSAVISRQDATDEQSTRLGVVRETFSRWLNQPD
                     WGRGNEKSPTETVDYSVLQRALSAEVDLYCQQMAKVLAEQVDESVTAGMNTFFAEFAS
                     CLTELQTRLRESLALRQQNESVVRLMQQQLQQTVMTHGWIYTDAQLLRDDIQTLFTAE
                     RY"
BASE COUNT         2719 a         2843 c         2696 g         2639 t
ORIGIN      
        1 gctttgcttt agcgagaact ggtcttttat ttgcactcag gagtacatgt atgaggattt
       61 gcagcgacca accttgtatt gttttattga ctgaaaaaga tgtctggata agggtgaatg
      121 ggaaagaacc tattagcctt aaagctaacc atatggcgtt attaaattgt gaaaataata
      181 ttatcgacgt ctcctctctt aacaacactt tggttgctca tattagtcac gacatcatca
      241 aagattacct ccggtttctg aataaagatc tctcgcaaat accagtatgg caacgtagcg
      301 ctacgcccat actcaccctg ccatgcctga cgccagacgt ctttcgcgtt gccgcgcaac
      361 acagcatgat gcccgcagaa actgagtcag aaaaggaacg aacacgcgca ttattattca
      421 cggtgctatc ccgttttctc gacagtaaaa aattcctttc attaatgatg tatatgttac
      481 gtaattgtgt aagtgacagc gtttatcaaa ttattgaaag cgatattcac aaagactgga
      541 atcttagtat ggtagccagt tgtttatgtc ttagcccaag tctgttaaag aaaaagttga
      601 aaagcgaaaa caccagttat agccaaataa tcaccacctg ccgcatgcgt tatgccgtaa
      661 atgaattaat gatggacggt aaaaatatct ctcaggtatc acagtcctgc ggctacaaca
      721 gtacgtcgta ctttatttct gtctttaaag acttctacgg tatgacgccg ctgcattatg
      781 ttagtcagca cagagaacgc actgtcgcct gatttttaac cttaacgaag agctatatta
      841 ataacggcat cagcgataac ccggtcgata ataattcaac tatcgaatgc aggcgtatga
      901 tatgacgtaa tttattgtca cgaagctcgc cttcgcagga gtttaattat gtcttcggat
      961 gctgatgctc acaaagtggg cttaatcccc gtcaccctga tggtgtcggg gaatattatg
     1021 gggtcaggtg tttttctgtt acctgcaaac ctggcctcta ctggcgggat tgccatttat
     1081 ggatggttgg tgacgattat cggtgcgctg gggctctcga tggtatacgc caaaatgtcg
     1141 ttcctcgatc caagtcctgg tggttcttac gcgtacgccc gccgctgctt tggcccgttt
     1201 ctcggttatc aaaccaacgt cctctactgg ctggcctgct ggatcggcaa tatcgccatg
     1261 gtggtcattg gcgtaggata tttaagttac ttcttcccga ttctgaaaga tccattggta
     1321 ttaaccatca cctgcgtcgt ggtgctgtgg atcttcgtcc tgctgaacat tgtcggtccg
     1381 aaaatgatca cccgtgtgca ggcagttgcc accgtgctgg cgctgatccc catcgtcggg
     1441 attgccgtat ttggctggtt ctggttccgt ggtgaaacct atatggcggc atggaacgtc
     1501 agcggcctgg gcaccttcgg tgcaattcaa agtaccctta acgttacgct gtggtcgttc
     1561 atcggtgtgg aaagtgcctc cgttgccgca ggtgtggtga aaaacccgaa acgcaatgtc
     1621 cctatcgcca ccattggtgg ggtattgatt gccgccgttt gctatgtact ttctaccacc
     1681 gcgattatgg ggatgatccc taatgccgca ctgcgcgttt ctgcttcgcc attcggtgat
     1741 gccgcacgga tggcgttggg tgacaccgcc ggggccattg tttccttctg cgcagctgcg
     1801 ggttgcttag gttcactggg cggctggacg ttgctggcgg gtcaaacggc gaaagccgct
     1861 gccgatgacg gactgttccc accgattttt gcccgtgtaa ataaagcggg cacgccagtg
     1921 gcggggctga ttatcgtcgg tattttgatg accatcttcc agctcagcag catttcacca
     1981 aacgcgacca aagagttcgg tctggtttct tccgtctcgg tcatctttac actggtgcca
     2041 tatctttaca cctgtgcggc gttactgctg ctcggtcacg gtcactttgg taaagcacgc
     2101 ccggcatatc tggctgttac taccattgcc ttcctctact gcatttgggc cgtggtgggg
     2161 tccggggcga aagaggttat gtggtcattt gtcaccctga tggtaatcac cgccatgtat
     2221 gcgctgaatt acaaccggct gcataaaaac ccgtatccct tagatgtacc aataagcaaa
     2281 gattaattcc ccttaatcca gcaaacataa aagccaacct taagaactta aggttggctt
     2341 aattttgctt tgcgagcata tgcgcacttt gttcgatgga aacaccgtga tgttgaagcg
     2401 cctactaaaa agaccctctt tgaatttact cgcctggcta ttgttggccg ctttttatat
     2461 ctctatctgc ctgaatattg ccttttttaa acaggtgttg caggcgctgc cgctggattc
     2521 gctgcataac gtactggttt tcttgtcgat gccggtcgtc gctttcagcg tgattaatat
     2581 tgtcctgaca ctaagctctt tcttatggct taatcgacca ctggcctgcc tgtttattct
     2641 ggttggcgcg gctgcacaat atttcataat gacttacggc atcgtcatcg accgctcgat
     2701 gattgccaat attattgata ccactccggc agaaagttat gcgctgatga caccgcaaat
     2761 gttattaacg ctgggattca gcggcgtgct tgctgcgctg attgcctgct ggataaaaat
     2821 caaacctgcc acctcgcgtc tgcgcagtgt tcttttccgt ggagccaata ttctggtttc
     2881 tgtactactg attttgctgg tcgccgcact gttttataaa gactacgcct cgttgttccg
     2941 caataacaaa gagctggtga aatccttaag cccctctaac agcattgttg ccagctggtc
     3001 atggtactcc catcagcgac tggcaaatct accgctggtg cgaattggtg aagacgccca
     3061 ccgcaacccg ttaatgcaga acgaaaaacg taaaaatttg accatcctga ttgtcggcga
     3121 aacctcgcgg gcggagaact tctccctcaa cggctacccg cgtgaaacta acccgcggct
     3181 ggcgaaagat aacgtggtct atttccctaa taccgcatct tgcggcacgg caacggcagt
     3241 ttcagtaccg tgcatgttct cggatatgcc gcgtgagcat tacaaagaag agctggcaca
     3301 gcaccaggaa ggcgtgctgg atatcattca gcgagcgggc atcaacgtgc tgtggaatga
     3361 caacgatggc ggctgtaaag gtgcctgcga ccgcgtgcct caccagaaca tcaccgcgct
     3421 gaatctgcct ggtcagtgca tcaacggcga atgctatgac gaagtactgt tccacgggct
     3481 ggaagagtac atcaataacc tgcagggtga tggcgtgatt gtcttacaca ccatcggcag
     3541 ccacggtccg acctattaca accgctatcc gccgcagttc aggaaattta ccccaacctg
     3601 cgacaccaat gaaatccaga tctgtagcaa agagcaactg gtgaacactt acgacaacac
     3661 gctggtttac gtcgactata ttgttgataa agcgattaat ctgctgaaag aacatcagga
     3721 taaatttacc accagcctgg tttatctttc tgaccacggt gaatcgttag gtgaaaatgg
     3781 catctatctg cacggtctgc cttatgccat cgccccggat agccaaaaac aggtgccgat
     3841 gctgctgtgg ctgtcggagg attatcaaaa acggtatcag gttgaccaga actgcctgca
     3901 aaaacaggcg caaacgcaac actattcaca agacaattta ttctccacgc tattgggatt
     3961 aactggcgtt gagacgaagt attaccaggc tgcggatgat attctgcaaa cttgcaggag
     4021 agtgagtgaa tgaaaattct gattgttgaa gacgatacgc tgttattgca gggattgatt
     4081 ctggcggcgc aaactgaagg ctacgcgtgc gatggcgtga caaccgcgcg gatggcggaa
     4141 caaagccttg aggccggtca ttacagcctg gtggtactgg atttagggtt acccgacgaa
     4201 gatggactgc attttctcgc ccgtatccgg cagaaaaaat ataccctgcc ggtactgatc
     4261 ctcaccgctc gcgatacgct gaccgacaaa atcgccgggc tggatgtcgg tgccgatgac
     4321 tatctggtga agccttttgc gctggaagag ttacacgccc gtatccgcgc cctgctacga
     4381 cgccataata atcagggcga aagtgagctg attgttggca atctgacgct gaatatgggt
     4441 cgccgtcagg tatggatggg cggtgaagag ttgattctga cgcccaaaga atatgctctg
     4501 ctgtcacggt taatgctcaa agcaggcagt ccggtgcatc gggaaattct ctacaacgac
     4561 atctataact gggacaatga accctcgacc aacaccctgg aagtgcatat ccacaatctg
     4621 cgcgacaaag tgggcaaagc ccgtatccgc accgtgcgcg gctttggcta tatgctggtc
     4681 gcgaatgagg aaaactaatt gaatctgatg cattttctgc gccgaccaat atcgctgcgc
     4741 caacggctga tattgaccat cggggccatt ttgttggtgt ttgagctgat cagcgtcttc
     4801 tggctatggc atgaaagtac cgagcagatt cagctgtttg agcaggcgct acgcgacaat
     4861 cgcaacaacg atcgccacat catgcgtgag atccgcgagg cggtcgccag cctgattgtc
     4921 cccggcgtct ttatggtcag cctgacgcta tttatctgct atcaggcggt acgccgcatc
     4981 acccgcccgc tggcggagct gcaaaaagag ctggaagcgc gcaccgccga caacttaacg
     5041 cccattgcca ttcacagcgc caccctcgaa atcgaagcgg tggtttcggc gttgaacgat
     5101 ctggtcagtc gcctgaccag cacgctggat aacgaaaggt tgtttaccgc tgacgtcgcg
     5161 cacgaactgc gaacgccact ggcgggggtg cgtttgcatc tggaactgct ggcgaaaacg
     5221 catcacattg atgtagcacc gttagtggca cggcttgatc agatgatgga gagcgtctcc
     5281 cagctgctgc aactggcgcg tgccggacag tcattttctt ccggtaatta tcaacatgta
     5341 aaactgctgg aagatgtcat tctcccctcg tatgacgaac tcagtaccat gctcgaccag
     5401 cgacagcaaa ccctgctatt gccagagagc gccgccgaca tcaccgttca gggtgatgca
     5461 accctgctgc ggatgttatt gcgaaacctg gtagaaaacg cccatcgtta cagcccgcaa
     5521 ggcagcaaca ttatgattaa gctgcaagaa gatggcggag cggtcatggc agttgaagat
     5581 gaaggaccag gtattgatga gagtaaatgc ggggagttga gtaaagcgtt tgtacgtatg
     5641 gacagccgtt atggcgggat tggtctgggg ttaagtattg tcagccgcat tacacagttg
     5701 catcacgggc agtttttcct gcaaaaccgg caagagactt ccggcacgcg ggcctgggta
     5761 cggctgaaga aagatcagaa cgtggcaaac cagatataaa gaaagctgct gaccaccagc
     5821 acgctgaaca cggtagttaa actttcataa acacggtttt tcattgcact ctcctccgtt
     5881 aacctggagg agagtatgcg cgtcagagat taagtgaacc ttaagagttc aattggcctg
     5941 ataagacagc gtcacatcag gccatccgtt tcagcttatt catcaattcg cggatgttgc
     6001 tgcaccaggc gggtacgttt cgcctgcaaa tcggcaatct cgtggtcaat attatcgatt
     6061 ttctgctcga tattatcgta atgctcgacg agaatttcct tcgcttcctg tatatctgac
     6121 gccgccggtg tcgcaccttt caacggacga tttgccgtct ctttcatggt tacgccggtg
     6181 attaaaccaa tcaccgccac taccatcagg taataggcag gcatcatcag attctgcgag
     6241 ctttcgacca gccaggccgc cagtgttggc gtcagaccgg caaccagcac cgaaatatta
     6301 aatgccgccg ccagcgcgct gtaacggata tgcgtcggga acatcgctgg caaggtagaa
     6361 gccataacgc ccgtaaagca gttaaggatc accgccagca tcagtaaccc ggcaaaaatc
     6421 aggccgatga cgttactgtt aatcagaata aacgccggga tcgccaacac aaacagggca
     6481 acactaccaa gtagcacaaa cggacgacgg ccaaaacggt cactcagcaa gcccatcacc
     6541 ggctggacaa acagcatacc gatcataatg gcgataataa tcagcacccc gtggtcttcg
     6601 gagtaatgca ggttatgcga caaataactc ggcatatagg tcagcaacat gtagtaagtc
     6661 acgttggtgg caattaccag accaatacat gtcaacaggc tgcgccagtg tttggtggca
     6721 atctctttaa acgagacttt cgggccatcc tgcaaacctt cgcggtcgcc ctgttccagt
     6781 ttatcgacat gctgctggaa cgccggagtt tcttccagcg catggcgcag gtaaagcccg
     6841 ataatcccta acggcagagc aataaagaac ggaatacgcc agccccagtc gaggaagttc
     6901 gcttcgccga caatggtcga aattaacacc actacgccag cacccagcac aaacccggca
     6961 atagaaccaa agtccagcca gctgcccata aagccacgtt tacggtcagg ggagtattcc
     7021 gcaacaaata tcgacgcccc ggtatattca ccgccgaccg agaaaccttg tgccatctta
     7081 cagatcaaca gcagaatcgg tgcccaaata ccaatcgtgt cgtaggacgg tattaagcca
     7141 atacagaacg tactgatcga cataatcaca atagtgatag cgaggatctt ctggcgacca
     7201 tatttatcgc ccaacatacc aaagaagagt ccgccaagcg gtcgaatcag aaagggaacg
     7261 gagaacgtgg caagtgcagc aaccatctgc acgctggggt cagcccccgg gaaaaaaact
     7321 ttacctaatg cgtaagcaac aaaaccataa acaccaaaat caaaccattc cattgcatta
     7381 cccagtgatg ctgcggtaat ggctttacgc agtttaccgt catcaataat ggtgacatca
     7441 cgaagggtaa tcggttttac ttttttcctt ttcagcatag ctttcctcgc agagttggcc
     7501 catttccgca aacgccagaa aaatcagcgc gacggccgca aaaggggagc gggaattgca
     7561 ggatgcaatc tctgtaacaa gcgtagcggg tttgcttaca ccctccggtt aaggaatgta
     7621 caatcaaacc agttgacgcc tgaattgggc agttaatgac ctttttaccc taccagtgtt
     7681 taaatttgtg atcaacttca cacatggatt tcgtttagga ctcattgatg taactgatta
     7741 tttacgccaa atttacagag aagatttcct cgaccattgc ccccgccaga cgctgcgctg
     7801 aacagagtcg tggcatcccc agcgcgacag tttgccagcg ttgggtcact gaccagcaaa
     7861 cgggttgttt atctgccgtg gtccactttc ccagccaact taaaaaatca gcatgatccc
     7921 cgcccgtcgg aacggtcgaa gaggcaaacc actgatggta atagtgacgc gtggtcgggg
     7981 ccgcattgat actctctgcc agatgttgtg tcgctttcac gcgcaaatca cccagcaaca
     8041 acgccaccgc ttgcgggctt cccagacgac aggcatcgcc aaatgccccc caacgcaact
     8101 cttcgagaac gataaaacag cgcccaggca acgaccaggc gttatacgcc ccagcacgcc
     8161 agcgggtaaa aatttgctcg ctctgatcac ctgcctgcac cagtaggcct cgttgcgtta
     8221 acgccttttc cttccagcgg caacgggctg aaaaccactc atacaaggcg gcaatttgct
     8281 gggggagctc cgggaaagca gagtgctggc ggtgatccat tttttgcagc agcgccagat
     8341 gctgcgcgat ctgcgtcagc gccagatgac cgggatccag catcgacgcc agtttttcca
     8401 ccattgtcag tcgcaggcta agcggcgcat ttaacatgcc gccgttcgtc catgtctgaa
     8461 gctgcacgcg cgcaagaagt tcctgcatca gtcgttcacg aaactgctgc tgatgggctt
     8521 gtggaaggcg ggcatcatcg ccctgcgcca gatccactaa aaagcgggga taaaccgact
     8581 ccagcacgcg accggggccg tccagtaacg tcttggtcaa tatcgttctg ccgtgaaaag
     8641 tgtttgaata tcatcgcgta acagctgggc gtcggtgtaa atccagccgt gagtcatcac
     8701 agtctgctgc aattgctgct gcatcagcct gaccaccgat tcattttgtt gacgcagagc
     8761 caggctttcg cgtaaacgcg tctgtaattc cgtcaaacat gaagcgaact cagcgaaaaa
     8821 agtattcatg cctgccgtaa cagattcatc gacctgctct gccagaactt tagccatttg
     8881 ttggcaataa agatcgactt ctgcgcttaa tgctcgttgc aacacactgt aatcaaccgt
     8941 ttctgtcggg gatttctcat ttccccgtcc ccagtcgggc tgattcaacc agcgcgaaaa
     9001 agtctcacgc acaacgccta aacgcgtgct ctgctcgtcc gttgcatcct ggcgcgaaat
     9061 gactgcactg aacagctggc gagtgttgaa gtggggaact acgccgtgaa aaacaggaaa
     9121 atgaaaccca ggacgaaacc ctgactcgct caattccatt ttgacttgtt gctcaatggg
     9181 gcgaataaca tcggttaaca cccggcaaag ggtggattcc agctcggcaa aacgcagcgt
     9241 aaagtcgcga ctgatggtgt tctgcgccgt ctgtaacagt gtctcacagc gggtacgcat
     9301 ctcgcttaac ggctccgaat catcctgaaa caaggcggct aactgcgcat tcagcgcatc
     9361 ttgttgttga cgcagaaagt ggttggcgga ggtcagggcc agctcgattt catgtttaat
     9421 ctcgccgctc acctgcgcct gattgagttg caatagctgc aaactttctt cgacctgatg
     9481 gatattttgc cgcaattgtt cacaagcgac gtttaacccg tgcgcacgaa aatccaggta
     9541 ttcccgcgcc tgctgcgcgt aattcaacag tttatgcgca gcagatcgca aagcatacaa
     9601 cgaggcgtta gcgtaagcgg catgaagcaa cgcctgaatt ggctgggcga acagcgaatc
     9661 ttcccacaac tgatcggcag catgacgaat atgttcgagg tccgccagat cggcatgacg
     9721 ccagcgcctg ccgagcgcgg catgggcaaa atcttccacc cagcgttgtt gctctggcgc
     9781 tggtaactta ccgttgttgg ctaactcatg gcgcgcccga ttcgccaggt agccccacat
     9841 cgacgacacc ggaaatatct gctgtggcgt aatacagcct ttcatcagcg tcccggaaat
     9901 cagtgcccgc acctggtcgg cgtcgtcact gttacgatcc tgttgatcga acttattgac
     9961 cagcacatac agcggcaccg attgccccac cgccaaaatc gcctcacgga cctcttcatc
    10021 ggagatcgat ttcagttgcg tataatccag caccgccagt accgccgagg cgcgtgccag
    10081 ctgctggtta agcatttttt gcagatgcgg ttgcccggct tcatttggcc cgggggtatc
    10141 cagtaacgtc aactgaccgg gataactctc cagccccgcc agatggacaa actccacttc
    10201 aatcacggga atatgctcaa tggcggcgta agcagaaaaa ggaaaatcga cgtccagcgc
    10261 cttcgccagt cgcactaaat cattcaaact tttcagacaa tgaaaaatag gctgggcacc
    10321 cagataatat ttttcgaaag cgacgccatt ttcgatccgc tgcataagcg cacgcatatc
    10381 tttatctatt tccagcacat cggtcagatg cttaatatcg caatcacgca ggcgctgttg
    10441 taattgttga attaaacaat cgattggcgc gacatgtgaa aaatgcagta ccggttcctt
    10501 ttgcccgggc gtatggcgaa taagcgtcgg cagcgcagtc attgggcgat tacgattagg
    10561 cagaacctcc gtaccaacaa tggcattaat ggtggttgat ttccctgctt tcatggtacc
    10621 gacaattgcc agcaccattt ccagtcggga aattttacgc aactcattat tcagcatcgc
    10681 gtgacgttcg gcgatattag gctgactcca gggtaaagcc agttgtggcg cgtcgtctcc
    10741 gggtacagag agaggcattt tttccagtaa ctgcaactgt tggcgagaaa gctgtaacag
    10801 gcgttcagcc tcctgactta actcatacag ggtctgtgtg tacatagaaa attcttcctt
    10861 aaagcaaatt ttgttacttt tatttagcca gattgtt
//
LOCUS       DAPGWB010000150        10807 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.152, whole genome shotgun sequence.
ACCESSION   DAPGWB010000150 DAPGWB010000000
VERSION     DAPGWB010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10807
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.152"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            184..1398
                     /locus_tag="RHX79_003743"
     CDS             184..1398
                     /locus_tag="RHX79_003743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001625315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-galactonate dehydratase family protein"
                     /protein_id="HDV2198862.1"
                     /translation="MKIIAADVFVTCPGRNFVTLKITTESGLCGLGDATLNGRELSVA
                     SYLKDHLCPQLIGRDASRIEDIWQFFYKGAYWRRGPVTMSAISAIDMALWDIKAKAAN
                     MPLYQLLGGASREGVMVYCHTTGRTIDEVLEDYAKHQQMGFKAIRVQCGVPGMQTTYG
                     LAKGKGLAYEPATKGLWPEEQLWSSEKYLDFTPKLFEAVRNKFGFNEHLLHDMHHRLT
                     PIEAARFGKSIEDYRLFWMEDPTPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLI
                     EEQLIDYIRTTITHAGGITGMRRIADFASLYQVRTGSHGPSDLSPVCHAAALHFDLWV
                     PNFGVQEYMGYSEQMLEVFPHSWRFEEGYMHPGDEPGLGISFDEKLAAKYPYDPAYLP
                     VARLEDGTLWNW"
     gene            1465..2748
                     /locus_tag="RHX79_003744"
     CDS             1465..2748
                     /locus_tag="RHX79_003744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000382182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2198863.1"
                     /translation="MDVDVSTSVAGNKPQRIRRIQTVTLVLLFMAGIVNFLDRSSLSV
                     AGEAIRGELGLSATEFGVLLSAFSLSYGFSQLPSGILLDRFGPRIVLGAGLIFWSLMQ
                     ALTGMVNSFSHFILMRIGLGIGEAPFMPAGVKSITDWYAQKERGTALGIFNSSTVIGQ
                     AIAPPALVLMQLAWGWRTMFVIIGVAGILVGICWYAWYRNRAQFVLTDEERTYLSAPV
                     KPRPQLQFSEWLALFKHRTTWGMILGFSGVNYTGWLYIAWLPGYLQAEQGFSLAKTGW
                     VAAIPFLAAAVGMWVNGIVVDRLAKKGYDLAKTRKTAIVCGLMMSALGTLLVVQSSSP
                     AQAVAFISMALFCVHFAGTSAWGLVQVMVSETKVASIAGIQNFGSFVFASFAPIVTGW
                     VVDTTHSFNLALVIAACVTFTGALCYFFIVKDRIE"
     gene            3000..3917
                     /gene="oxyR"
                     /locus_tag="RHX79_003745"
     CDS             3000..3917
                     /gene="oxyR"
                     /locus_tag="RHX79_003745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HDV2198864.1"
                     /translation="MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELG
                     VMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVG
                     PYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPL
                     FDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTH
                     FRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGS
                     PLRSRYEQLAEAIRARMDGHFDKVLKQAV"
     gene            complement(3900..5300)
                     /gene="sthA"
                     /locus_tag="RHX79_003746"
     CDS             complement(3900..5300)
                     /gene="sthA"
                     /locus_tag="RHX79_003746"
                     /EC_number="1.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418397.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Si-specific NAD(P)(+) transhydrogenase"
                     /protein_id="HDV2198865.1"
                     /translation="MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGG
                     CTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQ
                     GFYERNHCEILQGNARFVDEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTH
                     PRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQE
                     MSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTD
                     SLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALV
                     KGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMN
                     VGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTM
                     AEAYRVAALNGLNRLF"
     gene            5631..6281
                     /gene="fabR"
                     /locus_tag="RHX79_003747"
     CDS             5631..6281
                     /gene="fabR"
                     /locus_tag="RHX79_003747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HDV2198866.1"
                     /translation="MMGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGI
                     APTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN
                     NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVT
                     IVFSAGAEALDIGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE"
     gene            6281..6640
                     /locus_tag="RHX79_003748"
     CDS             6281..6640
                     /locus_tag="RHX79_003748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YijD family membrane protein"
                     /protein_id="HDV2198867.1"
                     /translation="MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLV
                     LTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIM
                     VFWIGAKMRNRKQEVAE"
     gene            complement(6680..7780)
                     /gene="trmA"
                     /locus_tag="RHX79_003749"
     CDS             complement(6680..7780)
                     /gene="trmA"
                     /locus_tag="RHX79_003749"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDV2198868.1"
                     /translation="MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHY
                     RMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLR
                     HKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTK
                     IELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELY
                     CGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG
                     VREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLE
                     TLSQTHKVERLALFDQFPYTHHMECGVLLTAK"
     regulatory      7894..8084
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            8149..9993
                     /gene="btuB"
                     /locus_tag="RHX79_003750"
     CDS             8149..9993
                     /gene="btuB"
                     /locus_tag="RHX79_003750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent vitamin B12 receptor BtuB"
                     /protein_id="HDV2198869.1"
                     /translation="MIKKASLLTACSVTAFSAWAQDTSPDTLVVTANRFEQPRSTVLA
                     PTTVVTRQDIDRWQSTSVNDVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDG
                     VRLNLAGVSGSADLSQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNIITTRDEPGTEI
                     SAGWGSNSYQNYDVSTQQQLGDKTRVTLLGDYAHTHGYDVVAYGNTGTQAQTDNDGFL
                     SKTLYGALEHNFTDAWSGFVRGYGYDNRTNYDAYYSPGSPLLDTRKLYSQSWDAGLRY
                     NGELIKSQLITSYSHSKDYNYDPHYGRYDSSATLDEMKQYTVQWANNVIVGHGSIGAG
                     VDWQKQTTTPGTGYVEDGYDQRNTGIYLTGLQQVGDFTFEGAARSDDNSQFGRHGTWQ
                     TSAGWEFIEGYRFIASYGTSYKAPNLGQLYGFYGNPNLDPEKSKQWEGAFEGLTAGVN
                     WRISGYRNDVSDLIDYDDHTLKYYNEGKARIKGVEATANFDTGPLTHTVSYDYVDARN
                     AITDTPLLRRAKQQVKYQLDWQLYDFDWGITYQYLGTRYDKDYSSYPYQTVKMGGVSL
                     WDLAVAYPVTSHLTVRGKIANLFDKDYETVYGYQTAGREYTLSGSYTF"
     gene            9938..10795
                     /gene="murI"
                     /locus_tag="RHX79_003751"
     CDS             9938..10795
                     /gene="murI"
                     /locus_tag="RHX79_003751"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312925.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDV2198870.1"
                     /translation="MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLL
                     PDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPA
                     LREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEML
                     GSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVL
                     PEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFE
                     TLEKLAVLG"
BASE COUNT         2480 a         2554 c         2897 g         2876 t
ORIGIN      
        1 taacgtgttg ttttaacgat ggtggttaat tattcaggtg gtttttgagg gtattttttc
       61 tcctcggcgg aaatttttat ttttaatgtg atcacggttg aataatcgct ctttctctct
      121 tgtatggtag taggcgtaaa attaagtttg aagcgtctat ttacaacaca ggagattgca
      181 ataatgaaaa ttattgctgc agatgttttt gttacttgcc cagggcgtaa tttcgttacg
      241 cttaaaataa ccactgaaag cggactttgt ggattaggag atgccacgtt aaatggtcgc
      301 gaattgtcgg tcgcttctta tctgaaagat catctttgtc cacaactaat tggccgcgat
      361 gccagccgta tcgaagatat ctggcaattc ttttataaag gtgcttactg gcgacgtggc
      421 cccgtcacga tgtcagccat ttctgccatt gatatggcgt tgtgggatat caaagctaaa
      481 gcggcaaata tgccattgta tcaactgctt ggtggtgctt ctcgtgaagg cgtgatggtt
      541 tattgccaca ccaccgggcg gacgattgat gaagtccttg aagactatgc aaagcaccag
      601 cagatgggct ttaaggcgat tcgtgtgcag tgcggtgtac cgggtatgca aactacttat
      661 ggcctggcga agggcaaagg cctggcgtat gaaccggcaa ccaaaggcct gtggccagaa
      721 gagcagttgt ggtcttcaga aaagtatctc gattttacgc cgaagttatt tgaagcggtg
      781 cgtaataagt tcggttttaa cgaacatctg ttgcatgaca tgcaccatcg cctgaccccc
      841 atcgaagcgg cgcgctttgg gaagagcatt gaggattacc gcctgttctg gatggaagat
      901 ccgacgcctg cagagaacca ggaatgtttt cgtctgattc gccagcatac cgtgacgccg
      961 attgcggtcg gtgaagtgtt taacagtatc tgggactgca agcagttaat cgaagagcag
     1021 ctgattgact atattcgcac gacgatcacc catgcaggcg gcattaccgg gatgcggcgg
     1081 attgccgatt ttgcatcgct ttatcaggta cgtaccggtt cgcatggccc ttcagattta
     1141 tcgcctgttt gtcatgcggc ggcgctgcat tttgacctat gggtaccaaa ttttggcgtt
     1201 caggagtaca tgggctattc cgaacaaatg cttgaagttt tcccgcacag ctggcgcttc
     1261 gaggaaggtt atatgcaccc aggcgatgaa ccggggctgg gtatttcttt cgatgagaaa
     1321 ctggcggcga aatatccgta tgacccggcg tatctccccg tcgcacgact ggaagatggc
     1381 acattgtgga actggtaata acggttcgct taattatttt ctgaatagtc atcaaatcga
     1441 ttaattccgc tcaaggagct aaaaatggac gttgatgtgt caaccagtgt tgcgggtaat
     1501 aaaccgcaac ggattcgtcg tattcagaca gtgaccctgg ttttattatt tatggcgggg
     1561 atcgttaatt ttctcgaccg ttcgtcattg agcgtggcag gtgaagcgat tcgtggcgag
     1621 ttaggattat cggcgacaga gtttggtgtt ttgctttctg cattttctct gtcttatggt
     1681 ttttcacaac taccttccgg tattttgcta gaccgctttg gcccacgaat tgttttaggc
     1741 gcaggcttaa tattctggtc attaatgcag gcattaacag gaatggttaa ttcttttagc
     1801 cactttattt taatgcgtat cggtctgggt attggcgaag cgccatttat gcctgcggga
     1861 gtaaagtcga tcaccgactg gtatgcacaa aaagaacgcg gcacggcgct ggggattttt
     1921 aactcatcta ccgttatcgg tcaggctatc gcgcctcctg ctcttgtatt gatgcagctg
     1981 gcatggggct ggcggacgat gttcgttatc atcggcgtgg cagggattct ggttgggatc
     2041 tgttggtacg cgtggtatcg caaccgggcg cagtttgtcc tgactgacga agaacggacg
     2101 tatctctccg cgccggttaa accgcgtcca cagctgcaat ttagcgagtg gctggcgctg
     2161 tttaagcatc ggacaacctg ggggatgatt ttaggtttct ctggcgtcaa ttataccggt
     2221 tggctctaca tcgcgtggtt acccggttat ttgcaagccg agcaaggttt cagtctggcg
     2281 aaaaccggtt gggtggcggc gattcctttc ctcgcggcgg cagtcgggat gtgggttaac
     2341 ggtattgttg tcgatcgact ggcgaaaaaa ggctacgacc tggcgaagac gcgtaaaacg
     2401 gctattgtct gcggtttgat gatgtcggca ttaggcacgt tgctggtcgt gcaatcttcc
     2461 tcgccagccc aggcggtagc gtttatctca atggcgctat tctgcgtgca tttcgctgga
     2521 acgtctgcat gggggctggt gcaggtgatg gtgtcagaaa caaaagtggc ttccatcgcc
     2581 gggattcaaa actttggcag ttttgttttt gcttcctttg ctccgatcgt aaccggttgg
     2641 gtagtggata ccacacactc gtttaatctg gcgttggtta tcgcggcctg tgtgacgttc
     2701 accggggcgc tgtgttactt ctttattgtc aaagatcgca ttgagtaatc gttactatca
     2761 ggctctcttg ctgtgggcct gtagaataaa aaaaagcgga tcctggagat ccgcaaaagt
     2821 tcacgttggc tttagttatt cgagttgaga aactctcgaa acgggcagtg acttcaaggg
     2881 ttaaaagagg tgccgctccg tttctgtgag caattatcag tcagaatgct tgatagggat
     2941 aatcgttcat tgctattcta cctatcgcca tgaactatcg tggcgatgga ggatggataa
     3001 tgaatattcg tgatcttgag tacctggtgg cattggccga gcaccgccat tttcggcgtg
     3061 cggcagattc ctgccacgtt agccagccga cgcttagcgg gcaaattcgt aagctggaag
     3121 atgagttggg cgtgatgttg ctggagcgga ccagccgtaa agtgttgttc acccaggcgg
     3181 gaatgctgct ggtagatcag gcgcgtaccg tactgcgtga ggtgaaagtc cttaaagaga
     3241 tggcaagcca gcagggcgag acgatgtccg ggccgctgca cattggtttg attcccacag
     3301 ttggaccgta cctgctaccg catattatcc ctatgctgca ccagaccttt ccaaagctgg
     3361 aaatgtatct gcatgaagca cagacccacc agttactggc gcaactggac agcggcaaac
     3421 tcgattgcgt gatcctcgcg ctggtgaaag agagcgaagc attcattgaa gtgccgttgt
     3481 ttgatgagcc aatgttgctg gctatctatg aagatcaccc gtgggcgaac cgcgaatgcg
     3541 taccgatggc cgatctggca ggggaaaaac tgctgatgct ggaagatggt cactgtttgc
     3601 gcgatcaggc aatgggtttc tgttttgaag ccggggcgga tgaagataca cacttccgcg
     3661 cgaccagcct ggagacgctg cgcaacatgg tggcggcagg tagcgggatc actttactgc
     3721 cagcgctggc tgtgccgccg gagcgcaaac gcgatggggt tgtttatctg ccgtgcatta
     3781 agccggaacc acgccgcact attggcctgg tttatcgtcc tggctcaccg ctgcgcagcc
     3841 gctatgagca gctggcagag gccatccgag caagaatgga tggccatttc gataaagtgt
     3901 taaaacaggc ggtttaaacc gtttaacgca gctacccgat aggcttccgc catggtcggg
     3961 tagttaaagg tggtgttgac gaagtactca atagtgttgc cgccaccttt ctgttccata
     4021 atcgcctgac cgatatgaat aatttcggca gcgcgctcgc caaagcagtg aatacccaga
     4081 atctcttttg tttcccgatg gaacaaaatt ttcagcgtgc ccacgttcat gccgacgatt
     4141 tgtgcgcgtg ccagatgttt aaactgggcg cggcccactt catatggcac tttcatcgcg
     4201 gtcagctgct gttcggtttt gcccacagag ctgatttccg ggatggtgta aatgccggta
     4261 gggatatctt caatcagatg cgcggtggct tcgcctttta ccagcgcctg cgcggcaatg
     4321 cgcccctggt cataggccgc tgatgccagg ctcggataac caatcacgtc gcccaccgcg
     4381 taaacgtgcg gctgtgcggt ctgatacatg ctgttgacct tcagctgtcc gcgactgtca
     4441 gtttccagcc caatgttctg taacgccagc gaatcggtat taccggtgcg accgttggca
     4501 tagagcaggc agtcagcttt cagtttttta cccgacttca aatgcatgat cacaccatcg
     4561 tcacagcctt cgatcttctc gtactcttcg ttgtgacgaa tcactacgcc actgttccag
     4621 aagtgatagg agagagaatc tgacatctct tgatcgagaa atgccagcag gcgatcgcgg
     4681 gtgttgatca gatccacttt tacatccata ccgcggaaga tcgacgcata ttcacagccg
     4741 atcactccag caccatagat aagtacatgg cgcggttcgt ggtgcatgct aagaattgag
     4801 tcgctgtcgt aaatgcgtgg atgggtgaaa tcaacatctg ttggatgata tggacgagag
     4861 ccgcaggcaa taacaaattt ttcagcggtt agtgtttcga cgctgccgtc cgggcaatcc
     4921 agcgccaacg tatgctcgtc aacaaagcga gcgttcccct gcaatatttc acagtgatta
     4981 cgttcgtaaa atccctgacg catgcgcgtt tgttgattaa tcacgttatc ggcatggtta
     5041 aggatatcgg caaaagaaga gcgaagcagt cgggaatggt cgctgtatag tgggttttga
     5101 ttgaattcta taatgcggct gacggcgtga cggagagctt tcgacgggat ggtgccccag
     5161 tgggtgcaac cgccgccaac attttgataa cgctcgataa ctgcgacgcg cgcaccttgc
     5221 ttaaccaggc ccattgcagc gccttcgccg ccggggccgg aacctattac tatggcatcg
     5281 taatcgtagg aatgtggcat ggtagggctt acctgttctt atacataaaa gcaacagaat
     5341 ggtaacattt tatcgcgggt aagccaattg atccccgtca tttatctggc tatatcctga
     5401 gcggcctttg ctttgtctgt ttcttacttt tgccctgacg ttttattgga tttttatcga
     5461 cgatactctc cgtttaagcg gcaggtttcc gctgtacgta aaagaaccgg ccaaagaatt
     5521 gcagtaaata tgttttattg cgttaccgtt cattcacaat actggagcaa tccagtatgt
     5581 tcattctctg gtatagtgcc agcagtactt ttggcaagga ttcagacatc gtgatgggcg
     5641 taagagcgca acaaaaagaa aaaacccgcc gttcgctggt ggaagccgca tttagccaat
     5701 taagtgctga acgcagcttc gccagcctga gtttgcgtga agtggcgcgt gaagcgggca
     5761 ttgctcccac ctctttttat cggcatttcc gcgacgtaga cgaactgggt ctgaccatgg
     5821 ttgatgagag cggtttaatg ctacgccaac tcatgcgcca ggcgcgtcag cgtatcgcca
     5881 aaggcgggag tgtgatccgc acctcggtct ccacatttat ggagttcatc ggtaataatc
     5941 ctaacgcctt ccggttatta ttgcgggaac gctccggcac ctccgctgcg tttcgtgccg
     6001 ccgttgcgcg tgaaattcag cacttcattg cggaacttgc ggactatctg gaactcgaaa
     6061 accatatgcc gcgtgcgttt actgaagcgc aagccgaagc aatggtgaca attgtcttca
     6121 gtgcgggtgc cgaggcgttg gacatcggcg tcgaacaacg tcggcaatta gaagagcgac
     6181 tggtactgca actgcgaatg atttcgaaag gggcttatta ctggtatcgc cgtgaacaag
     6241 agaaaaccgc aattattccg ggaaatgtga aggacgagta atgaaacaag caaatcaaga
     6301 tagaggtacg ctgctgctgg cgttagttgc tggcttatcg attaatggta ctttcgcagc
     6361 gctgtttagc tccattgtgc cattttctgt attcccgatt atttccctgg tgctgacggt
     6421 ttactgcctg catcaacgtt atcttaatcg cactatgccg gtaggcttgc cgggtctggc
     6481 agctgcctgt tttattctcg gcgtactgct gtacagcacg gtagttcgtg cggaatatcc
     6541 ggatatcggc tctaacttct tcccggcagt actctccgtc attatggtgt tctggattgg
     6601 cgcgaagatg cgtaaccgta agcaggaagt tgctgagtaa tcggaatcat gccggatgct
     6661 ggcgcatccg gcatgggttt tacttcgcgg tcagtaatac gccgcactcc atatggtgcg
     6721 tgtaggggaa ctgatcaaac agagccagac gttcgacctt gtgcgtctgg cttaatgttt
     6781 ccagattctt gcataacgtt tccggattgc aggagatata cagaatacgt ggatacgcct
     6841 gcaccatttt ctcggtttca ctgtccagac cgctgcgcgg cgggtcgaca aaaatggttt
     6901 cgcactgata actcttcaag tcgatccctt gcaggcgatt aaactcgcgt acaccattca
     6961 tcgcctgagt aaattcttct gccgccatac gaataatttg tacgttatca atatggttag
     7021 ctgcgatgtt gtattgcgca gcagcaaccg acggcttagc gatttcggtg gctaataccc
     7081 gatcaaaatt gcgcgccagt gctaatgaaa agttaccgtt gccgcagtac agctccagta
     7141 aatcgccttt tgagcctttg gttacgtcca gcgcccattc cagcatctga atattcatcg
     7201 ccgcgttcgg ctgggtaaaa ctgttttcta cctgacggta gatcatctct ttccctgcga
     7261 ccggcagacg ttcatcgatg taatcttgat ccagctcgat tttggttttc gttgcccgac
     7321 caatcagatg cacattcaga ttctgcgcgc gcagtgcatc gcgcagggct tccgcttcct
     7381 gacgccactc atcatccagc tttttatggt acaacaggga aaccaccgcc tgattactca
     7441 gcgtggtgag gtaatcaatc tggaacaact tgtggcgcag aacgggatta ttacgcacac
     7501 ccgcaatcat cgccgtcatc aactggttga tgagttcact ggcagcgggg aagctatcca
     7561 cgcggatgcg gcttttggtt tgttgatcga aaatgatgtg atacaggtca tcgccatcgt
     7621 gccagatgcg gaactccgca cgcatccggt aatgactgac cggcgagcga aacacttccg
     7681 gaaccaggtc agaaaacggt gccatcatac tttgcaaacg taccactttt tcggctaact
     7741 gcgcttcata ctgttctgtt ggaaggtgtt cgggggtcat gatgtatcct gaaaaattaa
     7801 agtacgcggc gattgtaggg attgctcatc agatgtccag atcttgatga attcctattt
     7861 gtgagctacg tctggacagt aacttgttac aacctgtagc atccacttgc cggtcctgtg
     7921 agttaatagg gaatccagtg cgaatctgga gctgacgcgc agcggtaagg aaaggtgcga
     7981 tgattgcgtt atgcggacac tgccatccgg tgggaagtca tcatctctta gtatcttaga
     8041 tacccctcca agcccgaaga cctgccggcc aacgtcgcat ctggttctca tcatcgcgta
     8101 atattgatga aacctgcggc atccttcttc tattgtggat gctttacaat gattaaaaaa
     8161 gcttcgctgc tgacggcgtg ttccgtcacg gcattttccg cttgggcaca ggataccagc
     8221 ccggatactc tcgtcgttac tgctaaccgt tttgaacagc cgcgcagcac tgtgcttgca
     8281 ccaaccaccg ttgtgacccg tcaggatatc gaccgctggc agtcgacctc ggtcaatgat
     8341 gtgctgcgcc gtcttccggg tgtcgatatc acccaaaacg gcggttcagg tcagctctca
     8401 tctattttta ttcgcggtac aaatgccagt catgtgttgg tgttaattga tggcgtacgc
     8461 ctgaatctgg cgggggtgag tggttctgcc gaccttagcc agttccctat tgcgcttgtc
     8521 cagcgtgttg aatatatccg tgggccgcgc tccgctgttt atggttccga tgcaataggc
     8581 ggggtggtga atatcatcac gacgcgcgat gaacccggaa cggaaatttc agcagggtgg
     8641 ggaagcaata gttatcagaa ctatgatgtc tctacacagc aacaactggg ggataagaca
     8701 cgggtaacgc tgttgggcga ttatgcccat actcatggtt atgatgttgt tgcctatggt
     8761 aataccggaa cgcaagcgca gacagataac gatggttttt taagtaaaac gctttatggc
     8821 gcgctggagc ataactttac tgatgcctgg agcggctttg tgcgcggcta tggctatgat
     8881 aaccgtacca attatgacgc gtattattct cccggttcac cgttgctcga tacccgtaaa
     8941 ctctatagcc aaagttggga cgccgggctg cgctataacg gcgaactgat taaatcacaa
     9001 ctcattacca gctatagcca tagcaaagat tacaactacg atccccatta tggtcgttat
     9061 gattcgtcgg cgacgctcga tgagatgaag caatacaccg tccagtgggc aaacaatgtc
     9121 atcgttggtc acggtagtat tggtgcgggt gtcgactggc agaaacagac tacgacgccg
     9181 ggtacaggtt atgttgagga tggatatgat caacgtaata ccggcatcta tctgaccggg
     9241 ctgcaacaag tcggcgattt tacctttgaa ggcgcagcac gcagtgacga taactcacag
     9301 tttggtcgtc atggaacctg gcaaaccagc gccggttggg aatttatcga aggttatcgc
     9361 ttcattgctt cctacgggac atcttataag gcaccaaatc tggggcaact gtatggcttc
     9421 tacggaaatc cgaatctgga cccggagaaa agcaaacagt gggaaggcgc gtttgaaggc
     9481 ttaaccgctg gggtgaactg gcgtatttcc ggatatcgta acgatgtcag tgacttgatc
     9541 gattatgatg atcacaccct gaaatattac aacgaaggga aagcgcggat taagggcgtc
     9601 gaggcgaccg ccaattttga taccggacca ctgacgcata ctgtgagtta tgattatgtc
     9661 gatgcgcgca atgcgattac cgacacgccg ttgttacgcc gtgctaaaca gcaggtgaaa
     9721 taccagctcg actggcagtt gtatgacttc gactggggta ttacttatca gtatttaggc
     9781 actcgctatg ataaggatta ctcatcttat ccttatcaaa ccgttaaaat gggcggtgtg
     9841 agcttgtggg atcttgcggt tgcgtatccg gtcacctctc acctgacagt tcgtggtaaa
     9901 atagccaacc tgttcgacaa agattatgag acagtctatg gctaccaaac tgcaggacgg
     9961 gaatacacct tgtctggcag ctacaccttc tgaaccacgt cccaccgtgc tggtgtttga
    10021 ctccggcgtc ggtgggttgt cggtctatga cgagatccgg catctcttac cggatctcca
    10081 ttacatttat gctttcgata acgtcgcttt tccgtatggc gaaaaaagcg aagagtttat
    10141 tgttgagcga gtggtggcaa ttgtcaccgc agtgcaagaa cgttatcccc ttgcgctggc
    10201 tgtggtcgct tgcaacaccg ccagtaccgt ttcacttcct gcattacgcg aaaagttcga
    10261 cttcccggtt gttggtgtcg tgccggcgat taaacctgct gcacgtctga cggcaaatgg
    10321 cattgtcgga ttactggcaa cccgcggaac tgttaaacgt tcttatactc atgagctgat
    10381 cgcgcgtttc gctaatgaat gccagataga aatgctgggc tcggcagaga tggttgagtt
    10441 ggctgaagcg aagctgcatg gcgaagatgt ttctctggat gcactaaaac gtatcctacg
    10501 cccgtggtta agaatgaaag agccgccaga taccgttgta ttgggttgca cccatttccc
    10561 tctactacaa gaagaactct tacaggtgct gccagaggga acccggctgg tggattctgg
    10621 cgcagcgatt gctcgcagaa cggcctggct gttagaacat gaagctccgg atgcaaaatc
    10681 tgccgatgcg aatattgcct tttgtatggc aatgacgcca gaagctgaac aattattgcc
    10741 cgttttacag cgttacggct tcgaaacgct cgaaaaactg gcagttttag gctgatttgg
    10801 ttgaatg
//
LOCUS       DAPGWB010000151        10772 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.153, whole genome shotgun sequence.
ACCESSION   DAPGWB010000151 DAPGWB010000000
VERSION     DAPGWB010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10772
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.153"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            148..861
                     /locus_tag="RHX79_003752"
     CDS             148..861
                     /locus_tag="RHX79_003752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate kinase"
                     /protein_id="HDV2198871.1"
                     /translation="MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPT
                     ERIYLGQSSGRIGEWISQLPVIGAPFGRYLRSKAAHVHEKPSTPPGNITALVIYLLSC
                     WRAYKFRKMLCKSQQGFLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELK
                     LYQWMASYLPVLLIRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGR
                     QPADEIMQASLRAIHAALS"
     gene            893..1651
                     /locus_tag="RHX79_003753"
     CDS             893..1651
                     /locus_tag="RHX79_003753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198872.1"
                     /translation="MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKS
                     LQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAV
                     IMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMF
                     LAQRERRLYQQMAQYRPELIIRLGIDIETAISRKPDHDYAELQDKIGVMSTIGYNGTK
                     ILEIDSRAPYSEVLEQAQKAVSLVAIVSDRRSLT"
     gene            1697..3046
                     /locus_tag="RHX79_003754"
     CDS             1697..3046
                     /locus_tag="RHX79_003754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HDV2198873.1"
                     /translation="MAGFNIKHWFADGAFRTIIRNSAWLGSSNVVSALLGLLALSCAG
                     KGMTPAMFGVLVIVQSYAKSISDFIKFQTWQLVVQYGTPALTNNNPQQFRNVVSFSFS
                     LDIVSGAVAIVGGIALLPFLSHSLGLDDQSFWLAALYCTLIPSMASSTPTGILRAVDR
                     FDLIAVQQATKPFLRAAGSVVAWYFDFGFAGFVIAWYVSNLVGGTMYWWFAARELRRR
                     NIHNAFKLNLFESARHIKGAWSFVWSTNIAHSIWSARNSCSTVLVGIVLGPAAAGLFK
                     IAMTFFDAAGTPAGLLGKSFYPEVMRLDPRTTRPWLLGVKSGLLAGGIGILVALAVLI
                     VGKPLISLVFGVKYLEAYDLIQVMLGAIVISMLGFPQESLLLMAGKQRAFLVAQTIAS
                     IGYIVLLFMFCHLFGVLGAAFAYFGGQCLDVALSLIPTLKAFFQRHSLLYNAAGEKS"
     gene            3046..3870
                     /locus_tag="RHX79_003755"
     CDS             3046..3870
                     /locus_tag="RHX79_003755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198874.1"
                     /translation="MMRKYFPLEASERLFVAIEEDDVVDAQVSLPPTIALSCTTEIIH
                     DNYALCLQFWLNGVNRQELLRLVRKQAKGDELTADERKQFKYMRARYKHLRFAQRLYL
                     KKHQAGFLFGKTTVFLGRFQDGFRNGKKNIVSYYGNLLRIYLSSPVWSLVNYSLRHSQ
                     LESVSSFIAYRQKQMHTLKEIIAKPRLTGREFHDVRKIISQQVSYYDTLRSLDPENKE
                     ALQISRFLAAINGLMGDKHDDMVADDMENRQSYDAPLALDSDIRQRLELLISRFPL"
     gene            3882..4442
                     /locus_tag="RHX79_003756"
     CDS             3882..4442
                     /locus_tag="RHX79_003756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708799.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HDV2198875.1"
                     /translation="MSSRLIIALIIMLLAPGVQAHNFVTGKTVTPVYIQEGGELLLNS
                     DDEIHYQKWNSTQLAGKVRIIQYIAGRKSAKKKNSLLIKAVEAANFPQDRFQPTTIVN
                     TDDAIFGTGYFVVGKIEKNKRRYPWAQFIIDGNGQGRVAWRLPEQSSTILVLNKAGQI
                     QWAKDGSLTPEEVDHVIALAQKLINE"
     gene            4473..5543
                     /gene="lptF"
                     /locus_tag="RHX79_003757"
     CDS             4473..5543
                     /gene="lptF"
                     /locus_tag="RHX79_003757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HDV2198876.1"
                     /translation="MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTL
                     ALDVVLDIVFYKVLIALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKA
                     VLYLAIPLSIFVTLLSMYGRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMIL
                     SQTVDQDNNRLTDALIYTSTANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQG
                     RDDNEQIYRNLQLHLNPLDQSPNVKRKAKSVTELARSAFPADHAELQWRQSRGLTALL
                     MALLAISLSRVKPRQGRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPG
                     LMLMGLLMLVARDFSLLQKFSR"
     gene            5540..6619
                     /gene="lptG"
                     /locus_tag="RHX79_003758"
     CDS             5540..6619
                     /gene="lptG"
                     /locus_tag="RHX79_003758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HDV2198877.1"
                     /translation="MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGY
                     RWTQAVLVVLMTLPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV
                     ALVAGILWTVSLGAIDEWVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVT
                     VKSLNEQGQPVGVEIFHYRDDLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETL
                     ETSDNLAWQSAFTSMDLDELSMPGNTFSVRQLNHYIHYLQETGQPSSEYRLALWEKLG
                     QPILTLAMILLAVPFTFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAP
                     VTALGLPVAFVLVALSLVYWYDRQH"
     gene            complement(6655..7827)
                     /locus_tag="RHX79_003759"
     CDS             complement(6655..7827)
                     /locus_tag="RHX79_003759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDV2198878.1"
                     /translation="MGLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKK
                     VILAGTNNYLGLTFNHDAISEGQAALAAQGTGTTGSRMANGSYAPHLALEKEIAEFFN
                     RPTAIVFSTGYTANLGVISALADHNAVVLLDADSHASIYDACSLGGAEIIRFRHNDAK
                     DLERRMVRLGERAKEAIIIVEGIYSMLGDVAPLAEIVDIKRRLGGYLIVDEAHSFGVL
                     GATGRGLAEAVGVEDDVDIIVGTFSKSLASIGGFAVGSEAMEVLRYGSRPYIFTASPS
                     PSCIATVRSSLRTIATQPELRQKLMDNANHLYDGLQKLGYELSSHISPVVPVIIGSKE
                     EGLRIWRELISLGVYVNLILPPAAPAGITLLRCSVNAAHSREQIDAIIQAFATLKQ"
     gene            complement(7827..8075)
                     /locus_tag="RHX79_003760"
     CDS             complement(7827..8075)
                     /locus_tag="RHX79_003760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV2198879.1"
                     /translation="MVNREIVMDYILSCLQDLVENGVEIKPDSDLVNDLGLESIKVMD
                     LLMMLEDRFDISIPINILLDVKTPAQLMETLLPWLENK"
     gene            complement(8107..9021)
                     /locus_tag="RHX79_003761"
     CDS             complement(8107..9021)
                     /locus_tag="RHX79_003761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001481799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HDV2198880.1"
                     /translation="MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNL
                     TWVRGSLEDTHSLSELVAGASAVVHCAGQVRGHKEEIFTRCNVDGSLRLMQAAKESCF
                     CQRFLFISSLAARHPELSWYANSKHIAEQRLTAMADEITLGVFRPTAVYGPGDKELKP
                     LFDWMLRGLLPRLGAPDTQLSFLHVTDFAQAVGQWLSAETVQTQTYELCDGVAGGYDW
                     QRIQQLAANVRCGSVRMVGIPLPVLTCLADISTALSRLAGKEPMLTRSKIRELTHADW
                     SASNNRISEDINWFPGISLEHALRNGLF"
     gene            complement(9018..10748)
                     /locus_tag="RHX79_003762"
     CDS             complement(9018..10748)
                     /locus_tag="RHX79_003762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000262881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acyl-AMP ligase"
                     /protein_id="HDV2198881.1"
                     /translation="MVYMSNKIFTHSLPMRYADFPTLVDALDYAALSSAGMNFYDRRC
                     QLEDQLEYQTLKTRAEAGAKRLLSLNLKKGERVALIAETSSGFVEAFFACQYAGLVAV
                     PLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHNNPELHVLSHAWF
                     KALPEADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRPG
                     DRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVA
                     PPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEPISAEQLHQFAECFRQVNFDDKTFM
                     PCYGLAENALAVSFSDEGSGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALP
                     EHGIEIRNEAGMPVAERVVGHICISGPSLMSGYFGDQVSQDEIAATGWLDTGDLGYLL
                     DGYLYVTGRIKDLIIIRGRNIWPQDIEYIAEQEPEIHSGDAIAFVTVQEKIILQIQCR
                     ISDEERRGQLIHALAARIQSEFGVTAAIDLLPPHSIPRTSSGKPARAEAKKRYQKAYA
                     ASLHVQESLA"
BASE COUNT         2593 a         2686 c         2814 g         2679 t
ORIGIN      
        1 atccaaaata tttatttggt taatatgttt ttatgaaagc gtaattcagg tcaatgtcac
       61 aattaaccat tgtcacaata aggttgaacg gatattctga gcacggacca cgtaatattc
      121 aatacattat ttactgccgg gtttttcgtg aatcaacgta atatgtcaat aattaattcc
      181 acgccagtgc gtgttattgc cattgtagga tgtgatggtt caggtaaatc gaccctcacg
      241 gcaagcctgg taaatgaact ggcagcaaga atgccaacag aacgcattta tctcgggcaa
      301 tcgtccgggc gaattggcga atggatttca cagctccctg ttattggcgc accttttggg
      361 cgttatctgc gaagtaaagc ggcacatgtg cacgaaaagc cctcaacacc gcctggcaat
      421 attactgcgc tggttatcta tctgctttcc tgctggcggg cgtacaagtt tcgcaaaatg
      481 ttgtgtaaaa gccagcaagg ctttctgctc atcaccgacc gctacccgca ggttgaagtg
      541 ccggggtttc gctttgatgg cccgcaattg gcaaaaacca cgggcggtaa cggttggata
      601 aaaatgttaa ggcagcgcga gctgaagctg taccaatgga tggcgtctta tttgcccgta
      661 ttgttgattc gtcttggcat tgatgaacaa accgcgtttg cgcgtaaacc tgaccaccaa
      721 ctggcagcgt tacaggaaaa aatcgccgtt acgccgcaac tgacattcaa tggcgcaaag
      781 atccttgaac tggatggtcg gcaaccagcc gatgaaatta tgcaagcgtc actacgcgca
      841 attcacgccg cgctttcctg atcaccaaaa tggatagggg atgatttaac gaatggatgc
      901 actacaaaca caaactgtta atagtacaac cgcaccgcag cccaactaca ttccggggct
      961 gattgcggtg gtcgggtgtg atggcaccgg taaatccacg ctgaccaccg acctggtgaa
     1021 atcgctgcaa caacactggc aaaccgagcg ccgctatttg gggctgctct ccggcgaaga
     1081 cggcgacaaa atcaaacgat tgccgttggt tggcgtctgg ctggaacggc gactggcggc
     1141 caaatcctcg aaaacccaaa gcatgaaaac caaatctccg gcgctatggg cggcggtgat
     1201 tatgtactgc ttctcgctgc gaagaatggc gaatctgcgc aaggttcagc gactggcgca
     1261 aagtggcgtt ctggtggtca gcgatcgctt cccgcaggct gaaatttcgg gcttttatta
     1321 tgacggaccg gggattggcg tcgaacgtgc gaccgggaaa atcagcatgt ttctggcgca
     1381 gcgcgaacgg cgtttatacc aacaaatggc gcaatatcgc ccggaattaa ttattcgcct
     1441 gggcattgat attgagactg ccatctcccg caagcctgac catgactatg ccgagctgca
     1501 ggacaaaatc ggcgtcatgt cgacgattgg ctataacggc acaaaaattc ttgagattga
     1561 ttccagagcg ccctacagcg aagtgctgga acaggcacag aaggcggttt ctctggttgc
     1621 catcgtttct gaccgccgaa gtttaactta aggctggcgg gatacttttt actatcaacg
     1681 ataaggtcag gctgaattgg cgggttttaa catcaaacat tggtttgcag atggcgcgtt
     1741 tcgcaccatt attcgcaata gcgcctggtt aggctccagt aatgtcgtga gcgccttgct
     1801 ggggctgttg gcgctctcgt gtgccggtaa agggatgacg cccgccatgt ttggcgtact
     1861 ggtgattgtg caatcgtacg ccaagtcgat cagcgatttt attaagtttc agacatggca
     1921 gctggtggtt cagtacggaa cgccagcctt gaccaacaat aatccgcagc aatttcgcaa
     1981 tgtcgtctca ttttccttct cgctggatat cgtcagcggc gcggtggcga ttgtcggcgg
     2041 cattgcctta ctgccattcc tttcccattc attaggtctg gatgaccaaa gcttttggct
     2101 ggcggcgctg tattgcacgc tcattccttc aatggcttcc tccacgccga ccggcattct
     2161 gcgtgcggta gatcgcttcg atttaattgc tgtacagcag gcgacgaaac cttttctgcg
     2221 cgcagcgggg agcgtcgtag cctggtattt tgactttggt tttgcgggtt ttgttattgc
     2281 ctggtacgtg tcgaatctgg ttggcggcac catgtactgg tggtttgcag cgcgcgaatt
     2341 acgccgcaga aatatccata atgccttcaa attgaatctg tttgagtctg cccgacacat
     2401 caaaggcgcg tggagttttg tctggtcaac caacattgcc cactccatct ggtcggcgcg
     2461 taactcgtgc agcacagtgc tggtggggat cgtgttagga cccgctgccg ccgggttatt
     2521 taaaatcgcc atgacattct tcgacgccgc cggaacgcca gcgggtttgc tgggtaaaag
     2581 tttttaccca gaggtgatgc gtttagatcc gcgcaccacc agaccgtggt tgttaggtgt
     2641 gaagtccggt ttactggcgg gcggaatcgg tattctggtg gcgctcgcgg tgttgatcgt
     2701 cggcaagccg ctcatttcgc tggtgtttgg cgttaagtat ctcgaagcgt atgacctgat
     2761 tcaggtgatg ctgggcgcaa ttgtgatttc gatgctgggc ttccctcagg agtcattgct
     2821 attgatggcg ggaaaacagc gcgcttttct cgtggcgcaa accatcgcct caatcggcta
     2881 catcgtattg ctgttcatgt tctgtcatct gtttggtgtg ctgggagcag cgtttgctta
     2941 cttcggtggg caatgtctgg acgtggcgct ctcgttaatt ccaaccttaa aggcattttt
     3001 tcagcgccat tccttgcttt ataacgcagc cggagagaaa tcctgatgat gagaaaatat
     3061 ttcccgcttg aggcgagcga gcgtctattt gttgcgattg aagaagatga tgtcgttgat
     3121 gcacaggtta gtttgccgcc gactattgca ctaagttgta ccaccgaaat cattcatgat
     3181 aattacgcgt tatgcctgca attctggctc aatggcgtta atcgtcagga gttactgcgt
     3241 ttagttcgca aacaagccaa aggcgatgag ctgactgctg atgagcgcaa acaatttaaa
     3301 tacatgcgag cgcgctacaa gcacctgcgt tttgcgcaac ggctgtattt aaagaagcat
     3361 caggccggat ttttattcgg caaaacgacc gtttttctgg ggcgttttca ggacggcttt
     3421 cgtaacggta agaaaaatat tgtgtcgtat tacggcaacc tgttacggat ttatttaagc
     3481 tctccggtct ggtcgttggt gaactattca ttacgccata gccagttaga aagcgtaagc
     3541 agttttattg cctatcggca aaagcaaatg cataccctga aagagattat tgccaaaccg
     3601 cgactaaccg gcagggaatt tcatgatgtg cgaaaaatca tcagccaaca ggtttcttat
     3661 tacgacacct taagatcgct tgatcctgaa aataaagagg cgttacagat ttcccgtttc
     3721 ctcgccgcca ttaatggcct gatgggagat aaacacgacg acatggtggc ggatgatatg
     3781 gaaaaccgcc agtcgtatga tgcaccgttg gcgctggata gcgatattcg tcagcgctta
     3841 gagctgctga tttcgcgttt tccgctatag ccggagcaat gatgtcatct cgtttgatta
     3901 ttgcgttgat tatcatgctc ttagccccgg gtgtgcaggc acacaatttc gtcactggca
     3961 aaacggttac ccctgtttat atccaggaag gcggcgagct gcttctgaat agcgacgacg
     4021 aaattcacta ccaaaagtgg aacagcacac aattagcagg aaaagtccgc attattcagt
     4081 atatcgccgg gcgtaagtcg gcgaagaaaa agaactcact gttaattaaa gcggttgaag
     4141 cggcaaactt tccgcaggat cgttttcagc ccaccaccat tgtgaacacc gatgatgcca
     4201 tctttggtac tggctatttt gttgttggca aaatcgaaaa aaataaacgc cgctatccgt
     4261 gggcgcaatt cattattgac ggcaatggac agggacgcgt tgcctggcgc ttgccggagc
     4321 agagttcaac cattctggtg ctgaataaag ccgggcaaat tcagtgggca aaggacggca
     4381 gcctgacgcc ggaagaggta gatcatgtca ttgcgctggc gcagaaactg atcaatgaat
     4441 aaaaaattca aaggattgag ggcgttagtg agatgaagct ggttgaacac tacatcatgc
     4501 gtggtacgcg ccgtctggtg ctgattatcg tcggttttct gatctttatt ttcgccagct
     4561 actccgcaca gcgttatctg accgaagcgg caaatgggac attagctctt gatgttgtgc
     4621 tggatatcgt tttctacaaa gtgctgattg cactggagat gttgttacct gttggtctgt
     4681 atgtgtcagt tggcgtgacg ctagggcaga tgtataccga ctcggaaatt accgctatct
     4741 ctgcggcggg gggcagtccg ggacgcttgt acaaagccgt tctttatctg gcgataccgc
     4801 taagtatttt tgtcaccctt ctgtcgatgt atggtcgtcc gtgggcttat acgcagattt
     4861 atcaactgga gcagcagtcg cagtcggagc tggatgttcg ccagttgcgg gcaaagaaat
     4921 ttaacactaa cgataacgga cgaatgatcc tttcgcagac ggttgatcag gataataatc
     4981 gcctgactga cgcgctgatt tatacttcta ctgccaatcg aacccgcatt ttccgcgccc
     5041 gttcggttga tgtggttgac ccatcacccg agaaaccgac cgttatgttg cacaacggca
     5101 ctgcctatct tctcgatcat caggggcgtg acgacaacga acagatctac cgtaatctgc
     5161 aattacatct gaatccgctg gatcaaagcc ctaacgtcaa acgcaaagca aaatcggtca
     5221 cggagctggc gcgctccgcc tttcctgccg atcatgccga actgcaatgg cgacaaagcc
     5281 gtggcctgac cgcattgttg atggcgctgc tggccatttc attaagtcgg gtaaaaccgc
     5341 ggcaagggcg attttcaacg ttattgccac tgacgttgct gtttattgcc attttttatg
     5401 gcggcgacgt ctgccgtacg ctggtggcta acggcgcgat tcctctcatt cctggtttgt
     5461 ggttagtgcc cggactcatg ctaatgggcc tgctgatgct ggtcgcacgc gacttctctt
     5521 tgctgcagaa attttcccga tgaatgtttt cagtcgctat ttaatccgtc atctctttct
     5581 cggttttgcc gccgccgcag ggctattgct gccgcttttt accaccttca acctgattaa
     5641 cgaactggat gatgtcagcc cgggcggtta tcgctggact caggcggtgc tggtggtgct
     5701 aatgacctta ccgcgcacac tggtcgaact ttcgccgttt atcgccttat tgggagggat
     5761 tgttggcctg gggcagttat cgaaaaacag tgagcttacc gccattcgca gcacggggtt
     5821 ttctatcttc cgtattgcac tggtggcgct ggttgccggg atattgtgga ctgtttcgtt
     5881 aggcgcgata gatgagtggg tggcgtcgcc attgcagcaa caggcgctgc aaatcaaatc
     5941 gaccgccacc gcgttggggg aggacgatga cattaccggc aatatgctgt gggccaggcg
     6001 cggcaatgaa tttgtgacgg tgaaatcgct gaatgaacag ggccagcctg tgggcgtgga
     6061 gatttttcat tatcgtgacg atctttcgct cgaatcctac atttatgcac gcagtgccac
     6121 cattaaagac gacaaaacgt ggatcctgca tggtgtgaat cataaaaaat ggcttaacgg
     6181 taaagaaacg ctggaaacat cagataatct tgcctggcaa tcggccttca ccagtatgga
     6241 tcttgatgag ttatcgatgc cggggaatac tttttctgtc cgtcagctta atcattacat
     6301 ccattatttg caggaaaccg ggcaacccag cagcgaatac cgccttgcac tgtgggaaaa
     6361 actggggcaa ccgatcctga ccctggcgat gattttgctg gctgtgccgt ttacctttag
     6421 cgccccgcgc tcgccaggga tgggtagccg tctcgctgta ggcgtcatcg ttggcttact
     6481 cacctggatc agctatcaaa tcatggtcaa tttgggattg ctatttgcgt taagcgcacc
     6541 tgttaccgcg ctcggtttac cggtagcgtt tgtgttggtg gcgttgagcc tggtgtattg
     6601 gtatgacaga caacattaaa cccgccgtgg cgcaaacacc acggcgggct cacattactg
     6661 cttcagagta gcaaatgcct gaatgatggc atcgatttgc tcacgactgt gggcagcatt
     6721 tacgctacag cgcagcagcg tgatgcctgc aggcgcggca ggcggcagga taagattcac
     6781 atacacgccc agcgagataa gctcgcgcca gatgcgtaaa ccttcctctt tcgaaccgat
     6841 tattactggc actaccgggc taatatgtga acttaactca taacccagtt tttgcagacc
     6901 gtcatacaga tggttggcgt tatccatcag cttttgccgc agctctggtt gtgtggcaat
     6961 ggttcttaac gatgagcgca cggtcgcaat gcaggacgga gaaggagagg cggtaaaaat
     7021 atacgggcgg ctgccgtagc gcagcacttc catcgcttcc gaaccgacag caaaaccgcc
     7081 aatcgaggcc agacttttac tgaaagtacc aacgataata tccacatcat cttcaacgcc
     7141 gacagcttca gccagtccgc gccccgttgc gcctaacacg ccaaacgaat gcgcttcatc
     7201 gacaatcaaa taaccaccga gacgacgttt gatatcaaca atttccgcca gcggcgcaac
     7261 gtcaccgagc atgctgtaga tgccctcaac gatgataatt gcctctttcg cccgttcacc
     7321 gaggcgaacc atgcgccgtt ccagatcttt agcatcgtta tggcggaaac gaataatttc
     7381 cgcgccaccg agagaacagg cgtcataaat actggcgtgg ctgtcggcat ccagtaacac
     7441 cacggcgtta tggtcggcaa gtgcgctgat gacgcctaaa ttagcggtat aaccggttga
     7501 aaaaacgata gcggtagggc gattgaaaaa ctcggcaatc tctttctcta acgccaggtg
     7561 cggcgcataa ctgccgtttg ccatacgaga accggtggtg ccggtacctt gggccgctaa
     7621 cgcggcctga ccttcgctga tggcatcatg attaaaggtt aaaccgagat aattattggt
     7681 cccggccaga atcacttttt tattgccgat ccggccttcg gtggcggaat acacttcatc
     7741 aatacaggtg ccaaacggtg ttaacccgtt gtcactaaat tgcagtcgct cgccagcaag
     7801 gcgcgcatat ttatcgtata gccccattat ttattctcca gccatggaag tagagtttcc
     7861 attaattgcg caggggtttt gacatccagc agaatattaa taggaatgga aatatcgaat
     7921 ctgtcttcca gcatcattaa gagatccatc actttgatcg actccaggcc aagatcgttg
     7981 acgagatcgc tgtcgggctt aatttccaca ccgttttcga ccaaatcctg taaacaggaa
     8041 aggatgtaat ccattactat ttcacgattt accatagaaa ccttaacaca cctttaaaca
     8101 agacaatcaa aatagcccgt tgcgtaatgc gtgttccagg ctaatcccgg gaaaccaatt
     8161 aatatcttca gaaatacggt tattacttgc cgaccagtcg gcgtgggtta attcacgaat
     8221 tttcgagcgg gtcagcatag gttctttacc tgccaggcga ctcaacgcgg tactgatatc
     8281 cgcaaggcag gtgagtaccg gcagaggaat accaaccatt cgcacggaac cgcaacggac
     8341 gttggcggca agttgctgta tgcgttgcca gtcatagccg ccagcgacgc catcgcataa
     8401 ttcataggtt tgcgtctgta cagtttcggc gcttaaccac tgacccactg cttgcgcaaa
     8461 atcggtgacg tgcaggaaag agagctgtgt atctggtgca ccaagtcgtg gcagcaggcc
     8521 gcgcagcatc cagtcaaaca gcggttttaa ctctttatcg ccgggaccat acacggctgt
     8581 cgggcgaaaa acgcccagcg taatttcgtc agccattgca gtcagccgtt gttcggcgat
     8641 gtgtttggaa tttgcgtacc aggagagctc gggatggcgc gccgccagcg aagagataaa
     8701 cagaaaacgt tggcaaaagc agctctcttt tgctgcttgc atcaggcgca ggctgccgtc
     8761 aacgttacag cgggtgaaaa tctcttcttt gtgcccgcgc acttgcccgg cgcaatggac
     8821 cactgcgctg gctccggcaa ccagctcgct aagtgaatga gtatcttcca gcgaaccgcg
     8881 cacccaggtg agattatcat tgacgtgagc gcgggcagta cgcgtcaatg cgcgaacgtg
     8941 aaagccgcgg gcgagcaggt tatcgataat atatttaccg ataaacccgg tagcgcccgt
     9001 caccgcgaca gtttgattca tgccagggat tcctgcacat gaaggcttgc agcataagcc
     9061 ttctgataac gttttttcgc ttccgcacgg gcaggcttgc cggaggatgt tcggggaata
     9121 ctgtggggcg gcaacagatc gatagccgcg gttacgccaa attcgctttg gatccgtgcc
     9181 gccagcgcgt ggataagctg cccgcgacgt tcttcgtcgc tgatccgaca ctggatctgc
     9241 aaaatgattt tttcctggac ggtaacaaaa gcaatcgcat cgccagaatg aatttccggt
     9301 tcttgttccg caatatattc aatatcctgc ggccagatat tacggccacg aataataatc
     9361 agatctttaa tacgtccggt gacatacaga taaccgtcca gcagataacc gaggtcgccg
     9421 gtgtctaacc agcccgtcgc ggcaatctcg tcttgcgaaa cctggtcgcc aaagtaaccg
     9481 ctcatcaggc tggggccgga gatgcaaata tggcctacca cacgttccgc gaccggcata
     9541 cctgcttcat tgcggatttc aatgccatgt tccggcaacg ctttgccgca gttgacgaaa
     9601 gtcgatacgg cgcgtgtttc agcacccggc gcgacggctt tgccctgata ttctaggatg
     9661 tcgcgatcca cttcgttaac cacaacccca gagccttcat cagagaagct gacagccagc
     9721 gcattttctg ccagtccgta gcacggcatg aacgttttat cgtcaaagtt aacctgacgg
     9781 aaacattcag cgaattgatg gagttgttct gcggagatcg gctcagcacc aataccagcg
     9841 acgcgccagc aggaaagatc cagttcagcg agatcttttt cattcacgcg gcgttggcac
     9901 aattcatagc caaacggcgg cgcaacggaa acggtgccgc gatttttact gatcaattta
     9961 agccattgca aaggacgcat ggcaaaatcc tgagtgcgca aataatctac tgaaagttgc
    10021 gtggcgacgg gggtcaggag aaagccgacc agtcccatat catggtagaa aggcagccag
    10081 gagacgcagc ggtcgccagg gcgtaattta atgccatcgt ggcttatagc acgtagatta
    10141 gccatcactt cgcgatgggt gataatgacg ccacggggaa aacgggtgct gccggaggtg
    10201 tactggaggt aggcgatatc gttcggaact ggacgctgga gcgcaacatc ggcttccggt
    10261 aatgccttaa accaggcgtg gcttaaaaca tgtaattcgg ggttgttatg cgtcgcggca
    10321 ttgaccagtg gcaaccactc atcaccagtg ataatggctg cgggctggca acttgccagt
    10381 aaaccctgga gtttggcgct ccaggaatcc cgctgaccga cgcccattgg aatcgccaac
    10441 gggacggcga ctaagccagc atactgacag gcaaaaaaag cctctacaaa cccgctactc
    10501 gtttcggcaa tcagcgccac gcgttcgcct tttttcaggt tcagcgataa caaccgcttc
    10561 gcaccagctt cggcacgcgt ttttaacgtc tgatattcca gttgatcttc aagttggcaa
    10621 cgtctgtcat aaaaattcat tccggcgcta ctcagagcgg cgtagtccaa agcatcaacc
    10681 agcgttggaa aatcggcata gcgcataggt agggaatgcg taaagatttt attagacata
    10741 tacaccacga aaaaattgga tatcaaaaat aa
//
LOCUS       DAPGWB010000152        10675 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.154, whole genome shotgun sequence.
ACCESSION   DAPGWB010000152 DAPGWB010000000
VERSION     DAPGWB010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10675
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.154"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(148..618)
                     /gene="bcp"
                     /locus_tag="RHX79_003763"
     CDS             complement(148..618)
                     /gene="bcp"
                     /locus_tag="RHX79_003763"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDV2198882.1"
                     /translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP
                     GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQ
                     FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA"
     gene            complement(618..1190)
                     /locus_tag="RHX79_003764"
     CDS             complement(618..1190)
                     /locus_tag="RHX79_003764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     repressor"
                     /protein_id="HDV2198883.1"
                     /translation="MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
                     GEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDV
                     ADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQ
                     AFKALCTELNAQGSINVVNYSQHDEQDGVK"
     gene            1336..2214
                     /gene="dapA"
                     /locus_tag="RHX79_003765"
     CDS             1336..2214
                     /gene="dapA"
                     /locus_tag="RHX79_003765"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDV2198884.1"
                     /translation="MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGT
                     TGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT
                     VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI
                     KEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMC
                     KLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITD
                     SGRETVRAALKHAGLL"
     gene            2231..3265
                     /gene="bamC"
                     /locus_tag="RHX79_003766"
     CDS             2231..3265
                     /gene="bamC"
                     /locus_tag="RHX79_003766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708316.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HDV2198885.1"
                     /translation="MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEA
                     APLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGD
                     TASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGR
                     YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAAN
                     AAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNM
                     AVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL
                     VAVFQAAFSK"
     gene            3478..4191
                     /gene="purC"
                     /locus_tag="RHX79_003767"
     CDS             3478..4191
                     /gene="purC"
                     /locus_tag="RHX79_003767"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDV2198886.1"
                     /translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFD
                     RKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLV
                     KRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKAND
                     VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSL
                     GGLIEAYEAVARRLGVQLD"
     gene            4346..4573
                     /gene="vapB"
                     /locus_tag="RHX79_003768"
     CDS             4346..4573
                     /gene="vapB"
                     /locus_tag="RHX79_003768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system antitoxin VapB"
                     /protein_id="HDV2198887.1"
                     /translation="METTVFLSNRSQAVRLPKAVALPEDVKKVEIIAIGRTRIITPAG
                     ESWDSWFDGENVSADFMDIRDQPAMQERESF"
     gene            4573..4971
                     /gene="vapC"
                     /locus_tag="RHX79_003769"
     CDS             4573..4971
                     /gene="vapC"
                     /locus_tag="RHX79_003769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(fMet)-specific endonuclease VapC"
                     /protein_id="HDV2198888.1"
                     /translation="MLKFMLDTNICIFTIKNKPVHVRERFNLNSGRMCISSVTLMELI
                     YGAEKSQMPERNLAVIEGFVSRLEVLDYDSAAATHTGQIRAELARQGRPVGPFDQMIA
                     GHARSRGLIVVTNNTREFERVAGIRLEDWS"
     gene            5118..5981
                     /locus_tag="RHX79_003770"
     CDS             5118..5981
                     /locus_tag="RHX79_003770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HDV2198889.1"
                     /translation="MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVV
                     LVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMG
                     KTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
                     QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHSMQ
                     QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGD
                     PAQCNTFGKSI"
     gene            5996..8011
                     /gene="tmcA"
                     /locus_tag="RHX79_003771"
     CDS             5996..8011
                     /gene="tmcA"
                     /locus_tag="RHX79_003771"
                     /EC_number="2.3.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cytosine(34) acetyltransferase TmcA"
                     /protein_id="HDV2198890.1"
                     /translation="MAELTAFHTLTAQMKREGIRRLLVLSGEEGWCFDHALKLRDALP
                     GDWLWISPQPDAENHCSPSALQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWL
                     VLLLPVWEEWENQPDTDSLRWSDCPDPIATPHFVQHFKRVLTADNDAILWRQNQPFSL
                     AHFTPRTDWHTATGAPQPEQQQLLQQLLTMPSGVAAVTAARGRGKSALAGQLISRIAG
                     SAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLV
                     SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEAL
                     VFDDENFTHTPQGNIVISAFEQTLWRSDPETPLKVYQLLSGAHYRTSPLDLRRMMDAP
                     GQHFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGSNPLA
                     ATLRGRRVSRIAVHPARQREGTGQQLIAGALQYTRDLDYLSVSFGYTGELWRFWHRCG
                     FVLVRMGNHREASSGCYTAMALLPMSNAGKQLAEREHYRLRRDAQALAKWNGETLPVD
                     PLNDAVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNVSDAQ
                     LCTTLKLSGRKMLLVRQREEAAQALFALNDVRTERLRDRITQWQFFH"
     gene            8085..8783
                     /gene="ypfH"
                     /locus_tag="RHX79_003772"
     CDS             8085..8783
                     /gene="ypfH"
                     /locus_tag="RHX79_003772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416968.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HDV2198891.1"
                     /translation="MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPLFP
                     DALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGA
                     NATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDP
                     VIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEAL
                     SGGKPGDDDVIEMM"
     gene            complement(8893..9093)
                     /locus_tag="RHX79_003773"
     CDS             complement(8893..9093)
                     /locus_tag="RHX79_003773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpfN family protein"
                     /protein_id="HDV2198892.1"
                     /translation="MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPP
                     HRDFNDKWDDDDDWPKKDQPKK"
     gene            complement(9121..10248)
                     /gene="dapE"
                     /locus_tag="RHX79_003774"
     CDS             complement(9121..10248)
                     /gene="dapE"
                     /locus_tag="RHX79_003774"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020078199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDV2198893.1"
                     /translation="MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMD
                     FADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKG
                     SLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLV
                     GEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
                     WDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLE
                     KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMG
                     AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA"
     gene            complement(10252..10608)
                     /locus_tag="RHX79_003775"
     CDS             complement(10252..10608)
                     /locus_tag="RHX79_003775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HDV2198894.1"
                     /translation="MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNG
                     FINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPAIIKRPLLCAPGKPM
                     LLGFSDSSYQQFFHEV"
BASE COUNT         2571 a         2613 c         2908 g         2583 t
ORIGIN      
        1 gaacggtaca aaaatgatgg tcattaacgt tcagcaaaaa atggattcga cacccgtgtc
       61 gcaggggaaa gtgagaatgt gatcttgatc acgagaagtg aggtgtgctg accacaagcg
      121 cagccagcac ggaatggagc aaagtaatca ggcgtgttct ttcagccagt tcagcacaac
      181 gtcgtggtga ttgctggttt tgaaatcgtc aaagacatgt tcgattttgc catcagcgtc
      241 aatcaggaag ctgatgcgat gaataccatc gtaggttttg cccatgaagg acttttcacc
      301 ccagacgccg aattgttcgc acacctggtg gtcctcatca gacaggagcg taaagttaag
      361 cagctctttt tccgcaaaac gggagagttt ttcgggttta tcggtgctga tacccagcac
      421 atcaacgccc gcttttttca actcatccat gttatcgcgt aagccgcagg cctgtacggt
      481 acagccgggg gtcatggctt tcgggtagaa ataaaccaga acacgctgtc cctggaagtc
      541 ggtcaaatta acttgttctc cgtcttgatc cggcaagcta aatttcggtg cgatatcacc
      601 ggctttcagt ggattcatta cttaactcca tcctgttcat catgttggga ataattgacg
      661 acgttaatac tgccttgtgc attgagttct gtacataggg ctttgaacgc ttgctcaata
      721 tttgctgcgt ccgcagatgc ggggctgtgg gcggttatct gaatatgcaa ctgcgcagcc
      781 cgttcatttt cagcaggttg cgtgcgcgac accagctccg caatgttcat atgatgcgcg
      841 tcgaaaagtg ctgtgaagcg ttcaattaaa tgcggggagt ctgccacatc gacctgaacc
      901 cagacagatg ctggcattgg cggacgcgga cgcgccgtcg tgcgcttcat cacgattaaa
      961 agatccagct cggcaccttt caacggtaac gttgattcaa tcagagtaat ggcattccat
     1021 gaaccggaaa gcagcatgat aaacgtgaac tcttctccca gcatcgccag gcgactgtct
     1081 tcaatattac agccgcaact actgacatga cgggtgatgg tgttcacaat tccagggcga
     1141 tcggcaccca acgcagtgat caccagataa tgttgcgatg acagtgtcaa actggttatt
     1201 cctttaaggg gtgagttgtt cttaaggaaa gcataaaaaa aacatgcata caacaatcag
     1261 aacggttctg tctgcttgct tttaatgcca taccaaacgt accattgaga cacttgtttg
     1321 cacagaggat ggcccatgtt cacgggaagt attgtcgcga ttgttactcc gatggatgaa
     1381 aaaggtaatg tctgtcgggc tagcttgaaa aaactgattg attatcatgt cgccagcggt
     1441 acttcggcga tcgtttctgt tggcaccact ggcgagtccg ctaccttaaa tcatgacgaa
     1501 catgctgatg tggtgatgat gacgctggat ctggctgatg ggcgcattcc ggtaattgcc
     1561 gggaccggcg ctaacgctac tgcggaagcc attagcctga cgcagcgctt caatgacagt
     1621 ggtatcgtcg gctgcctgac ggtaacccct tactacaatc gtccgtcgca agaaggtttg
     1681 tatcagcatt tcaaagccat cgctgaacat actgacctgc cgcaaattct gtataatgtg
     1741 ccgtcccgta ctggctgcga tctgctcccg gaaacggtgg gccgtctggc gaaagtaaaa
     1801 aatattatcg gaatcaaaga ggcaacaggg aacttaacgc gtgtaaacca gatcaaagag
     1861 ctggtttcag atgattttgt tctgctgagc ggcgatgatg cgagcgcgct ggacttcatg
     1921 caattgggcg gtcatggggt tatttccgtt acggctaacg tcgcagcgcg tgatatggcc
     1981 cagatgtgca aactggcagc agaagggcat tttgccgagg cacgcgttat taatcagcgt
     2041 ctgatgccat tacacaacaa actatttgtc gaacccaatc caatcccggt gaaatgggca
     2101 tgtaaggaac tgggtcttgt ggcgaccgat acgctgcgcc tgccaatgac accaatcacc
     2161 gacagtggtc gtgagacggt cagagcggcg cttaagcatg ccggtttgct gtaaagttta
     2221 gggagatttg atggcttact ctgttcaaaa gtcgcgcctg gcaaaggttg cgggtgtttc
     2281 gcttgtttta ttactcgctg cctgtagttc tgactcacgc tataagcgtc aggtcagtgg
     2341 tgatgaagcc tacctggaag cggcaccgct tgcggagctt catgccccgg ctggaatgat
     2401 tttgccggtg acctccggtg attatgcaat cccggtgacc aacggtagtg gtgctgtcgg
     2461 taaggcgctg gacattcgtc caccagccca gccgctggca ctggtttctg gcgcgcgtac
     2521 ccagttcacg ggcgataccg cttcattgct ggtggaaaat ggtcgtggca atactctgtg
     2581 gccgcaggtg gttagcgtgc tgcaggcgaa aaactacacc atcacccaac gtgatgatgc
     2641 tggtcagaca ctgaccaccg attgggtaca atggaaccgt ctggacgaag acgagcagta
     2701 tcgtggtcgt tatcaaatct ctgttaagcc gcagggttat cagcaggcgg ttacggttaa
     2761 actgctgaac ctggaacagg cgggcaaacc ggttgcagac gcggcttcca tgcagcgtta
     2821 cagcacggag atgatgaacg ttatttccgc cggtctggat aaatctgcca ctgacgccgc
     2881 gaacgctgcg caaaatcgtg cctccaccac tatggacgta caaagtgcag ctgatgacac
     2941 cggtttacca atgctggtcg tacgcgggcc gttcaatgtg gtttggcaac gtctgccagc
     3001 ggcgctggaa aaagtgggca tgaaagtgac cgacagcacc cgttcgcagg gcaacatggc
     3061 cgtaacttat aagccgctgt ctgacagcga ctggcaggaa ctgggcgcga gcgatccagg
     3121 cctggcatcc ggtgactata aactgcaggt tggcgattta gataaccgca gcagcctaca
     3181 gttcatcgat ccgaaaggtc atactctgac tcagagtcag aacgacgcgc tggtagctgt
     3241 cttccaggct gcgtttagca agtaaaaata cagggctgga atcatccggc ccttttttct
     3301 gatatgatac gcaaacgtgt gcgtcggcag gaaaacgcga ttttagcggt aattcgcacg
     3361 aaatttgttt gtcggacgta gttcggataa ggcgttcacg ccgcatccga caaaacatcc
     3421 ggcacaccag acagcaaaag attttaaaac gttaattcac acccaggagt gataaagatg
     3481 caaaagcaag ctgagttgta tcgtggtaaa gcgaaaaccg tatacagcac ggaaaacccg
     3541 gacctgttgg tgctcgaatt ccgcaatgat acgtcagcag gggatggcgc gcgcattgag
     3601 cagtttgatc gcaaaggtat ggtgaacaac aagttcaact acttcattat gagcaaactg
     3661 gctgaagcgg gtatcccgac tcaaatggag cgtctgctct ccgataccga atgtctggtg
     3721 aaaaagctgg atatggtgcc ggttgagtgt gtcgtgcgta accgtgctgc tggctctctg
     3781 gtgaaacgtc ttggaatcga agaaggtatt gagctgaacc cgccgctgtt cgatctgttc
     3841 ctgaaaaacg acgccatgca cgatccgatg gtcaacgaat cttactgcga aacctttggc
     3901 tgggtgagca aagagaacct ggcgcgtatg aaagagctga cctacaaagc gaacgacgtg
     3961 ctgaaaaaac tgttcgatga tgctggtctg attctggtcg acttcaagct ggagtttggt
     4021 ctgtacaaag gtgaagtggt actgggcgat gagttctccc cggacggcag ccgcctgtgg
     4081 gacaaagaaa cactggagaa aatggacaaa gaccgtttcc gccagagcct cggtggcctg
     4141 atcgaggcct atgaagccgt cgcccgccgc ctgggtgtac agctggactg atttttctgg
     4201 ttgcttgttt atttagccgg agggtactcc ggctaaatgt cttcgatacc cccgctacaa
     4261 tacttcgcat tatctccctt tgacaggaaa gtaataacag gccaatatgt atatacatga
     4321 cgtatatccc aaaaaagggg gggctatgga aactactgta tttttaagta atcgcagtca
     4381 ggccgtcaga ttaccgaaag cggtcgctct gccagaggat gttaagaaag tagaaattat
     4441 tgcgattggt cgtacaagaa tcatcactcc cgccggtgag tcctgggaca gttggtttga
     4501 tggcgaaaat gtgagtgcgg attttatgga tatccgtgat caacccgcaa tgcaggaaag
     4561 ggaatcattc tgatgctgaa attcatgctg gataccaata tctgtatttt cactattaag
     4621 aataaaccag tacatgtcag agagcggttt aacctgaatt ctggccggat gtgtataagt
     4681 tctgtaacat tgatggagct tatctatggg gcagaaaaaa gtcagatgcc agaacgcaat
     4741 ttggcggtga ttgaaggttt cgtatctcgt ttggaagtgc ttgattatga tagtgctgct
     4801 gcgacgcata ctgggcaaat cagggccgag cttgcccggc agggaaggcc tgttggacct
     4861 tttgaccaga tgatagcggg acatgctcgc agtcgcggtt tgattgtggt taccaacaat
     4921 acccgagagt ttgagcgagt ggcgggaatc agactagaag attggagcta acattctctt
     4981 ttacttctaa cattcgtaaa ttatataacg tggcatgaag ccttaattcc tccgccattt
     5041 catcccgctt tcctgtggta atcttcctct gaaccaccta cgatcatttc tataatgaat
     5101 atattgttga ggtatctatg cgttggcaag gacgacgtga aagtgacaat gttgaagaca
     5161 ggcgcaacag ctctggtggt ccgtctatgg gcggtcccgg ttttcgcctg ccaagcggta
     5221 aaggcgggct gattttactg atagtcgtgc tggttgcagg ctactatggc gttgatttaa
     5281 ccgggttgat gaccgggcag ccggtttccc aacagcaatc aacgcggtca attagcccta
     5341 atgaagacga agccgcaaaa ttcacctcgg tgattctggc aaccacggaa gacacctggg
     5401 gacaacagtt cgagaagatg ggtaagacct atcagcaacc gaagctggtc atgtaccgtg
     5461 gaatgacgcg taccggatgc ggggcgggcc agtccataat ggggccgttc tattgcccgg
     5521 cggatggcac ggtttatatc gatctctcct tctatgatga catgaaagac aaacttggcg
     5581 cggatggcga ttttgcccag gggtacgtta tcgcccatga agtcggtcat catgtgcaga
     5641 aactgttagg catcgagccg aaagttcgtc aactgcaaca aaacgcgacg caggcggaag
     5701 tgaaccgctt atctgtgcgt atggaactcc aggccgactg ttttgccggt gtctgggggc
     5761 atagtatgca gcagcaaggc gttctggaaa ccggcgatct ggaagaggcg ctgaacgcgg
     5821 cgcaggccat cggcgatgac cgtttacaac agcaaagtca ggggcgagta gtaccagaca
     5881 gtttcactca tggcacttct cagcaacgct acagctggtt taaacgtggt ttcgacagcg
     5941 gcgatccggc acaatgcaat acttttggta aaagcattta acttccgggg cagggatggc
     6001 tgaactgact gcgtttcaca cattaacagc gcaaatgaaa cgtgaaggga tccgccgctt
     6061 gctggtgttg agcggggaag agggttggtg ttttgatcat gcgcttaagt tgcgtgatgc
     6121 cttacctggc gactggctgt ggatttcgcc gcagccagat gctgaaaacc actgttctcc
     6181 ctcggcacta caaactttac ttgggcgcga gttccggcat gcggtattcg acgcccgcca
     6241 cggctttgat gccgctgcct ttgcggcact tagcggaacg ttgaaagcgg gaagctggct
     6301 ggttttgtta ctccctgtat gggaagagtg ggaaaaccaa cctgataccg actcgctgcg
     6361 ctggagtgat tgccctgacc ctattgcgac gccgcatttt gtccagcatt tcaaacgtgt
     6421 acttacggcg gataacgacg ctattctctg gcggcaaaac cagccgttct cgttggcgca
     6481 ttttactccc cgtactgact ggcacaccgc gaccggcgca ccacaaccag aacaacagca
     6541 actcttacag cagctactga ccatgccgtc gggcgtggca gcggtaacgg ctgcgcgtgg
     6601 gcgcggtaaa tcggcgctgg cagggcaact catttctcgt attgcgggta gtgcgattgt
     6661 cactgcgccc gcaaaagcgg caacggatgt actggcacaa tttgcgggcg agaagtttcg
     6721 ctttattgcg ccggatgcct tgttagccag cgatgagcaa gccgactggc tggtggtcga
     6781 tgaagccgca gccatacctg cgccgttgtt gcatcaactg gtatcgcgtt ttcctcgaac
     6841 gttgttaacc actacggtgc agggctacga aggcaccgga cgtggttttt tgctgaaatt
     6901 ttgcgctcgc tttccgcatt tacaccgttt tgaactgcaa cagccgatcc gctgggcaca
     6961 gggatgcccg ctggaaaaaa tggtcagcga ggcactggtt tttgacgatg aaaacttcac
     7021 ccatacacca caaggcaata tcgtcatttc cgcatttgaa caaacgttat ggcgaagcga
     7081 tccagaaacg ccgttaaagg tttatcagtt attgtctggt gcgcactacc ggacctcgcc
     7141 gctggattta cgccggatga tggatgcacc agggcaacat tttttacagg cggctggcga
     7201 aaacgagatt gccggggcgt tgtggctggt ggatgagggc ggattatctc aacaactcag
     7261 tcaggcggta tgggcaggtt ttcgtcgccc gcggggtaat ctggtggccc agtcgctggc
     7321 ggcgcacggt agcaatccac tggcagcgac attgcgtgga cggcgggtca gccggatagc
     7381 agttcatccg gcgcgtcagc gggaaggcac agggcagcaa cttattgctg gtgctttgca
     7441 atatacgcgt gacctcgact atctttcggt gagttttggt tacaccgggg agttatggcg
     7501 tttctggcac cgctgcggtt ttgtgctggt gcggatgggt aatcatcgtg aagccagcag
     7561 cggttgctat acggcgatgg cgctgttacc gatgagtaat gcgggtaaac aactggctga
     7621 acgtgagcat taccgtttac gtcgcgatgc gcaagctctc gcaaagtgga atggcgaaac
     7681 gcttcctgtt gatccactaa acgatgccgt cctttctgac gacgactggc ttgaactggc
     7741 cggttttgct ttcgctcatc gtccgctatt aacatcgtta ggttgcttat tgcgtctgct
     7801 acaaaccagt gaactggcat taccggcgct gcgtgggcgt ttacagaaaa acgtcagcga
     7861 cgcgcagtta tgtaccacac ttaaactttc aggccgcaag atgttactgg tccgtcagcg
     7921 ggaagaggcc gcgcaggcgc tgttcgcact taatgatgtt cgcactgagc gtctgcgcga
     7981 tcgcataacg caatggcaat tttttcactg actccttcaa ttttctccca tggtcattgt
     8041 gagtcagcgg cgtaaaatta atgacatcag ttaaggagtt cgccatgaaa catgaccatt
     8101 ttgttgttca aagcccggat aaacctgcgc aacagttgtt actgcttttc cacggtgtcg
     8161 gggataaccc ggtggcaatg ggggaaatag gtagctggtt tgcaccgctg tttcctgatg
     8221 cgctggtggt gagtgtcggt ggcgcggagc cgagcggtaa tccggcgggg cgtcagtggt
     8281 tttcggtgca gggtattacg gaagataatc gccaggcgcg tgtggatgcg atcatgccga
     8341 cgtttattga aacggtgcgc tactggcaga aacagagcgg agtaggggct aacgccacgg
     8401 cgctcatcgg tttctctcaa ggcgcgatta tggtgctgga gagcattaaa gccgaaccgg
     8461 gccttgcttc acgcgtcatt gcttttaacg gacgctatgc gagcctgccg gaaactgcgt
     8521 ctacagccac gacaattcac ctgattcatg gcggtgaaga tccggttatc gatctggcgc
     8581 atgcggttgc ggcgcaggaa gcgttaatca gtgccggtgg tgacgtgacg ctggatatcg
     8641 tggaggattt aggccatgcg atcgacaatc gcagtatgca atttgccctg gatcacttgc
     8701 gttataccat tccgaaacat tatttcgacg aagcgctaag tggcggtaag cctggcgatg
     8761 atgatgtgat tgaaatgatg taaaagacag attacctggc ctgataagac gcgtgagcgt
     8821 cgcatcaggc atcgttcacc attgccggat gcggcgttaa cgccttatcc ggcctacggt
     8881 tgagcactca gcttacttct tcggttgatc ctttttcggc cagtcgtcgt catcgtccca
     8941 cttatcgttg aaatcacgat gcgggggaag ctccggcttg ttggcgagaa atttcttatg
     9001 gtcgacgcgc ttgagatctt taatcacgtt cagcaggacg cctaccaaaa agacaatcac
     9061 cagaatccac caatatttag ccagccagtc catgcttatt tcctcttgca gaaccactca
     9121 tcaggcgacg agctgttcca tgatacgttg atacatacgg gcaagtagct gcaggtcggc
     9181 agcgttcaca cattcattaa ttttatgaat agtggcattg accggcccga gttccaccac
     9241 ctgcgccccc atgcgagcaa taaagcgccc gtcggacgtt ccgcctgtgg tcagtagctg
     9301 cggtttaatt tcattatagt gctcaaccgc gttaacgacc gcatccacca gtttaccgcg
     9361 cgcggtcaaa aatggctgcc cggaaagcca ccagtccacc gtataacgca gttgatgttt
     9421 ttcaagcagg gcaagcacct gtgctttgat catctcatca gtcagttcgg tgctgaagcg
     9481 gaagttaaac tgcacaaaca gttcacccgg aataacattg ttactgcccg ttcccgcctg
     9541 aatattagca atctgcatac tggtcgccgg gaaaaattca ttgccctgat cccactcaat
     9601 agccactaat tcattaagga aaggtgctgc gcgatgtact ggattgtcag ccagatgcgg
     9661 gtaggccaca tgcccctgaa cgccatgaat ggtaaggttg caggttaacg atccgcgacg
     9721 accatttttc accacatcac caaccacttc gatactcgac ggttcgccga ccaggcagta
     9781 atcgagacgc tcattacgtg ccatcaacgc ttcgacgact tttaccgtac cgttgtgggc
     9841 actggcttct tcatcagagg tgatcagaaa tgccagtcgc cccgtatggt tgggatgttg
     9901 tgcgacaaag cgttctgccg ctaccaccat cgccgccagc gagcctttca tatctgccgc
     9961 accgcgtccg aataacatgc catcacgaat ggtgggttca aacggcggat tgatccaacg
    10021 atcggcgtcg ccaggcggca ccacgtcggt atgcccggca aaggccaacg tttcaccttg
    10081 cccacgccat gcccaaaaat tctgcgtatc ggcaaaatcc atgcgttcaa cggtaaaacc
    10141 gatcgcctgc aaacgttcaa tcaacaaagc ctggcatcct gcgtcatcag gactcaggga
    10201 agggcggcga ataagctgtt gtgtcagctc aataaccggg cacgacatag actacacctc
    10261 atggaaaaat tgctgataac tggaatcact gaaacccagc agcataggct taccaggcgc
    10321 gcagagcaat ggacgtttga taattgcagg catttcagtc attaatgccg ccgcagaggc
    10381 cgcatcggtg attttattgc gggtggtttc gtccagttta cgccaggttg taccacgggt
    10441 gttcagtaac gcttcccagc ctaattcgtt gataaaaccg ttcaataatt cgctgtccag
    10501 cccatcgacg cggtaatcat gaaaacgata gtcgatgtta ttggcttcca gccaacggcg
    10561 agccttttta atggtgtcac aatttttgat gccgtaaagt gtaaccataa tgaatccttt
    10621 ttcgatctat gagaataaat actcatttaa gggtgaaaac attttgcctg caaat
//
LOCUS       DAPGWB010000153        10577 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.155, whole genome shotgun sequence.
ACCESSION   DAPGWB010000153 DAPGWB010000000
VERSION     DAPGWB010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10577
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.155"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..528)
                     /gene="fliZ"
                     /locus_tag="RHX79_003776"
     CDS             complement(<1..528)
                     /gene="fliZ"
                     /locus_tag="RHX79_003776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310687.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliZ"
                     /protein_id="HDV2198895.1"
                     /translation="MMVQHLKRRPLSRYLKDFKHSQTHCAHCRKLLDRITLVRDGKIV
                     NKIEISRLDTLLDENGWQVEQQSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEM
                     SPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQ
                     HYQRQTCSGLVQKSSS"
     gene            complement(574..1293)
                     /gene="fliA"
                     /locus_tag="RHX79_003777"
     CDS             complement(574..1293)
                     /gene="fliA"
                     /locus_tag="RHX79_003777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HDV2198896.1"
                     /translation="MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDL
                     LQAGGIGLLNAVERYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQ
                     AIGQLEQELGRNATETEVAERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELV
                     TDDHQRENPLQQLLDSNLRQRVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGE
                     SRVSQLHSQAIKRLRTKLGKL"
     gene            complement(1613..3445)
                     /locus_tag="RHX79_003778"
     CDS             complement(1613..3445)
                     /locus_tag="RHX79_003778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin FliC"
                     /protein_id="HDV2198897.1"
                     /translation="MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDD
                     AAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTG
                     TNSTSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDL
                     KKIDSDTLNLAGFNVNGKGSVANTAATTDNLTLAGFTAGTKAADGTVTYSKNVQFAAA
                     TASNVLAAAKDGDEITFAGNNGTGIAATGGTYTYHKDSNSYSFSATAASKDSLLSTLA
                     PNAGDTFTAKVTIGSKSQEVNVSKDGTITSSDGKALYLDEKGNLTQTGSGTTKAATWD
                     NLMANTDTTGKDAYGNSAAAAVGTVIEAKGMTITSAGGNAQVLKDAAYNAAYATSITT
                     GTPGDAGAAATAGNAAVGALGATAVDNTTADVADISISASQMASILQDKDFTLSDGSD
                     TYNVTSNAVTINGKAANIDDSGAITDQTSKVVNYFAHTNGSVTNDTGSTIYATEDGSL
                     TTDAATKAETTADPLKALDEAISSIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQS
                     RIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG"
     gene            3711..5117
                     /gene="fliD"
                     /locus_tag="RHX79_003779"
     CDS             3711..5117
                     /gene="fliD"
                     /locus_tag="RHX79_003779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HDV2198898.1"
                     /translation="MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKL
                     SAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNSIAGKYTISVTHL
                     AQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA
                     KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV
                     SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK
                     DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS
                     SSNYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS
                     NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL
                     NSTSSYLTQQFENNSNSK"
     gene            5142..5552
                     /gene="fliS"
                     /locus_tag="RHX79_003780"
     CDS             5142..5552
                     /gene="fliS"
                     /locus_tag="RHX79_003780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HDV2198899.1"
                     /translation="MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARL
                     FMQDNNQQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLR
                     NDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV"
     gene            5552..5917
                     /gene="fliT"
                     /locus_tag="RHX79_003781"
     CDS             5552..5917
                     /gene="fliT"
                     /locus_tag="RHX79_003781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001015018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliT"
                     /protein_id="HDV2198900.1"
                     /translation="MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAV
                     QEIAHLTEEVAPSTTIQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSV
                     LSAYGDQGGFVLAPQDNFS"
     gene            5995..7482
                     /gene="amyA"
                     /locus_tag="RHX79_003782"
     CDS             5995..7482
                     /gene="amyA"
                     /locus_tag="RHX79_003782"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HDV2198901.1"
                     /translation="MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPA
                     YKGASGGYSVGYDSYDLFDLGEFDQKGSIPTKYGDKAQLLAAIDALKRNDIAVLLDVV
                     VNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSKFIWDFKCF
                     SGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKY
                     WARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQT
                     YIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQ
                     PLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPII
                     EQLDELILARQRFAHGVQTLFFDHPNCIAFSRSGTDEYPGCVVVMSNGDDGEKTINLG
                     ENYGNKTWRDFLGNRQESVVTDENGEATFFCNGGSVSVWVIEEVI"
     gene            complement(7516..7929)
                     /locus_tag="RHX79_003783"
     CDS             complement(7516..7929)
                     /locus_tag="RHX79_003783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310694.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV2198902.1"
                     /translation="MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQ
                     RALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERD
                     GNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP"
     gene            8116..9321
                     /gene="yedE"
                     /locus_tag="RHX79_003784"
     CDS             8116..9321
                     /gene="yedE"
                     /locus_tag="RHX79_003784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HDV2198903.1"
                     /translation="MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGE
                     FTRWGGQLLQLFGVHAEEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVK
                     LRMPRSRIRIMQAIIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSW
                     FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQ
                     PKLGLAMLFGVGFGLLIERAQICFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYV
                     QLGVEPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGS
                     TILAYYWDDFAPALATDWDKINLLKTFGPMGGLLVTYLLLFTALMLIIGWEKRFFRRA
                     APQTAKEIA"
     gene            9318..9551
                     /gene="yedF"
                     /locus_tag="RHX79_003785"
     CDS             9318..9551
                     /gene="yedF"
                     /locus_tag="RHX79_003785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDV2198904.1"
                     /translation="MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVMSDCP
                     QSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK"
     gene            9658..10329
                     /locus_tag="RHX79_003786"
     CDS             9658..10329
                     /locus_tag="RHX79_003786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HDV2198905.1"
                     /translation="MCGRFAQSQTREDYLALLAEDIERDIPFDPEPIGRYNVAPGTKV
                     LLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADG
                     WFEWKKEGDKKQPYFIYRADGQPVFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIH
                     DRRPLVLSPEAAQEWMRQEIGGKEASEIATNGCVPANQFTWHPVSRAVGNVKNQGAEL
                     IQPVC"
     gene            complement(10369..>10577)
                     /locus_tag="RHX79_003787"
     CDS             complement(10369..>10577)
                     /locus_tag="RHX79_003787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV2198906.1"
                     /translation="ACCGHTAKENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVL
                     ACGEMVQSGRPLKQEPTEMIQATA"
BASE COUNT         2534 a         2682 c         2708 g         2653 t
ORIGIN      
        1 gctggaggat ttctgcacaa gtccgctaca cgtttgacgc tgatagtgtt gatacttccg
       61 taatgcgatg cggtaattgt tggtgctggt ggtgggcagc cacggggcga ggatttcatc
      121 aaggaaaccg tcctgcagct gatcgaggga aatattttgc tcgtgtagat gattccccaa
      181 acggcgcaga cgaacgacat attcacgcac cgtacctggg ctcatttcag tttgctcaaa
      241 aagaaattgc ttaaagccga taatatcgaa aaaatcactc tgcgttttgc aatgtaaatc
      301 accgcaaaat cggcacaatg ccgcccatga ttgttgttcc acttgccagc cattttcatc
      361 aagcagcgtg tccaggcggg aaatctcgat tttattcact attttgccgt cgcgaactaa
      421 ggtaatgcga tcgagtaatt tacggcaatg cgcgcaatgg gtctggctgt gtttaaagtc
      481 tttaagatag cggcttaatg gccgtctttt caggtgctgc accatcatta agaactcctg
      541 gtagtcaaaa ttaaagtgcg gcatttactg acgttataac ttacccagtt tagtgcgtaa
      601 ccgtttaatg gcctggctgt gtaactgact gacccgcgat tccccgacct ccagcaccgc
      661 gccaatctct ttgagattca gctcttcctg gtaatagagg gttaatacca gtttttcgcg
      721 ctccggcaac gtttcgatag cttccatcac tcgctggcgc agattactgt ccagcagttg
      781 ttgtagcggg ttttctcgct gatgatcatc agtaaccagt tcgatgctat cgccgtgctc
      841 ttcgcgccac tcatcgtagg agaagagctg gctgttattg gtgtcgagca acatttggcg
      901 ataatcggca atatcgatcc ctaaacgttc cgctacctca gtttccgtgg cgttgcggcc
      961 aagttcctgc tccagttgcc ctattgcctg tgccacttca cgcgcgttgc gtcgcacgct
     1021 gcgcggcacc cagtcacggc tgcgaagttc atccagcata gcgccacgga tacgctgcac
     1081 tgcgtaagtt gtaaatgccg ttccttgtag ggcgtcatag cgttcgacgg cattaagtaa
     1141 cccaatgccg cccgcctgta gcagatcgtc aagttccacg ctcgcgggca gtcgaacctg
     1201 caggcgcaat gcttcgtgac gcaccagcgg gacataacgc tgccacagcg agtgtttatc
     1261 cattacacct tcagcggtat agagtgaatt cacgataaac agccctgcgt tatatgagtt
     1321 atcggcatga ttatccgttt ctgcagggtt tttaatcgga cgattagtgg gtgaaatgag
     1381 gggttatttg ggggttaccg gtaaattcca tgcagaaaaa accccgccgg tggcggggga
     1441 gcacgttgct gacaaattgc gctttatgtt gccggatgcg gcgtaaacgc cttatccggc
     1501 ctacaaaaat gtgcaaattc aataaattgc aattcccctt gtaggcctga taagcgcagc
     1561 gcatcaggca atttggcgtt gccgtcagtc tcagttaatc aggttacgac gattaaccct
     1621 gcagcagaga cagaacctgc tgcggtacct ggttagcttt tgccagcacg gagttaccgg
     1681 cctgctggat gatctgcgct ttcgacatgt tggacacttc ggtcgcatag tcggcgtcct
     1741 gaatacggga ctgcgcttcg gacaggttgg tagtggtgtt gttcaggttg gtgaccgcgg
     1801 aatccagacg gttttgcacc gcaccgaggg aggagcggaa tttgtcgatg gagctgatgg
     1861 cttcgtccag agctttcagg ggatcggcgg tggtttcggc tttggttgct gcatcggtgg
     1921 tcaggctacc atcttctgtc gcataaatag tggagcctgt atcgttagtc acgctaccgt
     1981 tagtatgagc gaaataattg acaactttac tggtttggtc tgtgattgcg ccgctgtcat
     2041 caatgtttgc tgctttgcca ttgatagtga cagcattgct ggtcacgttg taagtatcac
     2101 taccatcact taaggtgaaa tctttatcct gaaggatgct cgccatttgc gaagctgaga
     2161 tagagatatc ggcaacatct gccgtggtat tatcaactgc cgttgcgccc agcgctccca
     2221 ccgcggcatt acccgcagtt gcagcggctc ccgcatcacc cggagtacca gtagtaattg
     2281 aggtcgcata tgcggcatta taagccgcgt cttttaacac ctgagcatta ccaccagcag
     2341 aagtgatggt cattcctttt gcttcgatta ctgtcccaac agctgctgcc gcagagttac
     2401 cataggcatc tttgcctgta gtatctgtat tggccatcag gttatcccag gttgcagctt
     2461 tggttgtgcc actacctgtt tgggtcaggt tgcccttctc atctaaatac agcgccttac
     2521 catcgctgga tgtaatcgta ccatctttgc taacgttaac ttcttgcgat ttagaaccaa
     2581 tagtcacttt agcggtaaat gtatcgccag cgtttggtgc cagtgtgctc aacagagaat
     2641 ctttagatgc agccgttgcg ctaaagctgt atgagttaga gtccttatga taagtataag
     2701 tccccccagt tgcagctata cctgtgccgt tattaccagc gaacgtaatt tcgtcgccat
     2761 ctttagcagc agccagtaca ttgcttgcag tcgcggcggc aaactggaca tttttgctat
     2821 aagttacggt gccatcagca gctttagtac ccgctgtaaa accagccaat gtcagattat
     2881 ctgtagtcgc agcggtattc gctacagaac ctttaccgtt aacgttaaaa ccagccagat
     2941 tcagcgtatc agagtcaatt ttcttcagat caatagtaat cgtttcgcca tcgttcgcgc
     3001 cgacctgaat tttcatcgag ccatctttag acagcacgtt cacgccgttg aactgggtct
     3061 gaccagatac gcggtcaatt tcgtcaagac gggatttgat ttcgtcctgg atggagtcca
     3121 ggtcagaggt ggagttagtt ccggtcgtcg cctgaaccgt cagttcacga atacgctgta
     3181 agttgttgtt aatttcggac agcgcgcctt cagtggtctg cgcaacagaa ataccgtcgt
     3241 tggcgttacg tgcagcctga gtcaggcctt taatgttaga agtaaaacgg ttagcaatcg
     3301 cctgacctgc ggcgtcatcc ttcgcgctgt taatacgcaa gccagaagac agacgctcga
     3361 tagaactcga cagcgcagac tggttcttgt tgatattatt ttgagtgatc agcgagaggc
     3421 tgttggtatt aatgacttgt gccatgattc gttatcctat attgcaagtc gttgattacg
     3481 tattgggttt ccacccgtcg gctcaatcgc cgtcaaccct gttatcgtct gtcgtaaaac
     3541 aacctttaga atttttttca caaacagcca ttttttgtta gtcgccgaaa tactcttttc
     3601 tctgcccctt attcccgcta ttaaaaaaaa caattaaacg taaactttgc gcaattcagg
     3661 ccgataaccc cggtattcgt tttacgtgtc gaaagataaa aggaaatcgc atggcaagta
     3721 tttcatcgct gggagtcggg tcaggtctgg atttaagttc aatccttgat agcctcaccg
     3781 ccgcgcaaaa agcgacgcta acccctattt caaatcagca atcgtcgttt accgctaaac
     3841 ttagcgccta cggtacgctg aaaagcgcgc tgacgacttt ccagaccgcc aatactgcat
     3901 tgtctaaagc cgatcttttt tccgccacca gcactaccag cagcaccacc gcgttcagtg
     3961 ccaccaccgc gggtaactcc atcgccggga aatacaccat cagcgtcacc catctggcgc
     4021 aggcgcaaac cctgaccacg cgcaccacca gagacgatac gaaaacggcg atcgccacca
     4081 gcgacagtaa actcaccatt caacaaggcg gcgacaaaga tccgattacc attgatatca
     4141 gcgcggctaa ctcgtcgtta agcgggatcc gtgatgccat caacaatgca aaagcaggcg
     4201 taagcgcaag catcattaac gtgggtaacg gtgaatatcg tctgtcagtc acatcaaatg
     4261 acaccggcct tgataatgcg atgacactct cggtcagcgg tgatgatgcg ctacaaagtt
     4321 ttatgggcta tgacgccagt gccagcagca acggtatgga agtctcggtc gccgcccaga
     4381 atgcgcagct gacggtcaac aacgtcgcca ttgagaacag cagcaacacc atcagcgacg
     4441 cgctggaaaa catcaccctg aacctgaacg atgtcaccac gggcaaccag acgctaacca
     4501 tcactcagga cacctccaaa gcgcaaacgg cgattaaaga ctgggtgaat gcctacaact
     4561 cgctaataga taccttcagc agcctgacca aatacaccgc cgtagatgcg ggagctgata
     4621 gccagagttc tagcaatggc gcactgctcg gcgactccac gctgcggacg attcagacgc
     4681 agttgaagtc gatgctgagt aataccgtta gttcttccaa ctataaaacg ttggcgcaga
     4741 ttggtatcac gaccgatccc agcgatggca aactggaact ggatgccgac aaactcaccg
     4801 ctgcactgaa aaaagatgcc agcggcgtag gtgcattgat tgttggcgat ggtaaaaaaa
     4861 ccggcatcac gaccaccatc ggcagcaacc tgaccagttg gctttcgaca acgggcatta
     4921 ttaaagccgc taccgatggc gttagtaaga ccctgaataa attaactaaa gactacaacg
     4981 ccgccagcga tcgcattgat gcgcaggtcg cgcgctataa agaacaattt acccaactgg
     5041 acgttttaat gacctcgttg aacagcacca gcagctactt aacgcagcag ttcgaaaaca
     5101 acagtaattc caagtaatca atattcatcg ggagacaggt catgtacgcg gcgaaaggca
     5161 cccaggccta tgcacaaatt ggcgtcgaaa gcgccgtaat gagcgccagc cagcagcagc
     5221 tggtcaccat gctatttgat ggagtgctga gcgcactggt tagagcgcgc ctgtttatgc
     5281 aggacaacaa tcagcaaggc aaaggcgtct ctttgtcaaa agcgatcaac atcattgaga
     5341 acggacttcg ggtgagtctt gatgaagaga gcaaagacga attaacccaa aacttgattg
     5401 ctctttatag ctatatggtc aggcgcttgc tgcaagccaa tttacgcaac gatgtctccg
     5461 cagtcgaaga agtggaagca ttaatgcgta atattgccga tgcctggaaa gagtcgttac
     5521 tctccccttc tttgattcag gacccagtct gatgaaccat gcaccgcatt tgtatttcgc
     5581 ctggcaacaa ctcgtcgaaa aaagccagct catgttacgc ctggcaacgg aagaacaatg
     5641 ggacgaactc atcgccagcg aaatggcgta tgtgaatgcg gtgcaggaga tagcacacct
     5701 gactgaagag gttgccccgt ccaccacgat acaggagcag ctccgcccga tgctgcgcct
     5761 gattctcgac aacgaaagca aggtaaagca gttattacag attcgtatgg atgaactggc
     5821 gaaactggtc ggtcagtcat cggtgcaaaa atcggtgtta agtgcctatg gcgatcaggg
     5881 cggctttgtg ctggctccgc aagataactt ctcgtgaatc ttaacgagct aatggttcgc
     5941 gaataatccg attacggcta cgcttctaat gttccccttg aatggagtcg aagaatgcgt
     6001 aatcccacgc tgttacaatg ttttcactgg tattacccgg aaggcggtaa gctctggcct
     6061 gaactggccg agcgcgccga cggttttaat gatattggta tcaatatggt ctggttgccg
     6121 cccgcctata aaggcgcatc gggcgggtat tcggtcggct acgactccta tgatttattt
     6181 gatttaggcg agtttgatca gaaaggcagc atccctacta aatatggcga taaagcacaa
     6241 ctgctggccg ccattgacgc cctgaaacgt aatgacattg cggtgctgtt ggacgtggta
     6301 gtcaaccaca aaatgggcgc ggatgaaaaa gaagctattc gcgtgcagcg tgtaaatgct
     6361 gatgaccgta cgcaaattga cgaagaaatc attgagtgtg aaggctggac gcgttacacc
     6421 ttccccgcgc gtgccgggca atactcgaag tttatctggg atttcaaatg ttttagcggt
     6481 atcgaccata tcgaaaaccc tgatgaagat ggcatattta aaattgttaa cgactacacc
     6541 ggcgaaggct ggaacgatca ggttgatgat gaattaggta atttcgatta tctgatgggc
     6601 gagaatatcg attttcgcaa tcatgccgtg acggaagaga ttaaatactg ggcgcgctgg
     6661 gtgatggaac aaacgcaatg cgacggtttt cgtcttgatg cggtcaaaca tattccggcg
     6721 tggttttata aagagtggat cgaacacgta caggaagttg cgccaaagcc gctgtttatt
     6781 gtggcggagt actggtcgca tgaagtcgat aaactgcaaa cgtatattga tcaggtggaa
     6841 ggcaaaacca tgctgttcga tgcgccgctg cagatgaaat tccatgaagc atcgcgcatg
     6901 gggcgtgact acgacatgac gcagattttc acgggtacat tagtggaagc cgatcctttc
     6961 cacgccgtga cgctcgttgc caatcacgac acccaaccgt tgcaagccct cgaagcgccg
     7021 gtcgaaccgt ggtttaaacc gctggcatat gccttaattt tgttgcggga aaatggcgtt
     7081 ccttcggtat tctatccgga cctctacggt gcgcattacg aagatgtcgg cggtgacggg
     7141 caaacctacc cgatagatat gccaataatc gaacagcttg atgagttaat tctcgcccgt
     7201 cagcgtttcg cccacggtgt acagacatta tttttcgacc atccgaactg cattgccttt
     7261 agccgcagtg gcactgacga atatcccggc tgcgtggtgg tcatgtcgaa cggggatgat
     7321 ggcgaaaaaa ccattaatct gggagagaat tacggcaata aaacctggcg tgattttctg
     7381 gggaaccggc aagagagcgt agtaaccgac gaaaacggtg aagcgacctt cttttgcaac
     7441 ggcggcagcg tcagcgtgtg ggttatcgaa gaggtgattt aaattcatcc ccggcggcaa
     7501 gccggggaga tttcattacg gcagtggcgt cggtaacggc gctttatcca gcgcggcggc
     7561 acactctgcc gtcgggcgat ccacacgctc catcgtcata ccatcgtact caatggtgtt
     7621 accgtcacgc tcaacctcgt acagctcacg ttttacggta acgttagtga gatcatcaga
     7681 catcaatgtc aacttgcccg gcacggcaat cacccgctgc cactgacggc aatccagggt
     7741 atcgccctct ttagtgacaa tcaggctgcc tatcgcttcc ggactgacca gcgcacgttg
     7801 cggccctttg gtctgccagt agcccgccag ccagtccggc gcgggggttt tcacgacatt
     7861 gttatagttt tcgacttcgg cacagcccgc cagcaacatg agcgcgcctg caattgcgag
     7921 ttttttcatc attcgtcctg catgagaaga aaagaggatt gtggcattaa agccctgatg
     7981 tcgccagcct ttccaggttc agagagaaat ttgatctaac tattattttt gtgaattatt
     8041 accccgaaaa taaatttgca tggtgtatga ttcgcgactc ttgtttcaaa ccttctgagt
     8101 tcagaggcta cattcatgtc atggcagcaa ttcaaacacg cctggttgat taaattctgg
     8161 gcgcccatcc ccgcggtcat cgcggcgggt attctctcca cttactattt tggcattact
     8221 ggcacctttt gggctgtcac gggtgaattt acccgttggg gcggccagct cctgcaactg
     8281 ttcggcgtcc atgctgaaga gtggggttat tttaaaatta tccatctgga aggatcgcca
     8341 ttaacccgca tcgacgggat gatgatcctc ggtatgtttg gcggctgctt tgccgcagcg
     8401 ctgtgggcca acaatgtcaa actgcgcatg ccgcgcagcc gtatccgcat tatgcaggcc
     8461 atcattggcg gcattatcgc cggttttggc gcgcgtctgg caatgggctg taacctggcg
     8521 gcgttcttta ccggtattcc tcagttctcg ctgcatgcct ggttctttgc catcgccact
     8581 gccattggtt catggtttgg cgcgcgcttt accctgctgc ccatcttccg tattcccgtg
     8641 aaaatgcaga aagtttctgc cgcctcaccg ctgacgcaaa aaccggatca ggcgcggcgt
     8701 cgttttcgtc tcgggatgct ggtctttttc ggcatgctgg gctgggcgct gctcacggcg
     8761 atgaaccaac ccaaactggg gctggcaatg ctgtttggcg tcggctttgg tttactgatt
     8821 gaacgtgcgc aaatctgctt tacttcagcg ttccgcgata tgtggatcac cggacgtacc
     8881 catatggcga aagcaatcat tattggtatg gcggtgagtg ccatcgggat cttcagttac
     8941 gtacagttag gcgttgaacc caaaatcatg tgggcgggac caaacgcggt aattggtggt
     9001 ttactgtttg gttttggcat cgtgctggca ggcggctgcg aaaccggctg gatgtaccgc
     9061 gcggtagaag gccaggtgca ctactggtgg gtcggtctgg gcaacgtgat cggctcaacg
     9121 attctggcgt attactggga tgatttcgct ccggcgctgg ccaccgactg ggacaaaatc
     9181 aacctgctga aaacctttgg cccgatgggt ggcctgctgg tgacatattt gctgttgttt
     9241 actgcgctga tgttgattat cggctgggaa aaacgcttct tccgccgtgc ggcaccgcag
     9301 actgctaagg agatcgcatg aaaaatatcg ttcctgatta ccgccttgat atggtgggtg
     9361 aaccctgccc ttatccggca gtcgcaactc ttgaggcgat gccgcagtta aaaaaagggg
     9421 aaatcctgga agtgatgagc gactgtccac agtcgatcaa taatattcca ctggatgcgc
     9481 gtaatcacgg ctatacggtg ctggatattc agcaagacgg gccgaccatt cgttatttaa
     9541 ttcagaagta atccctcatt cccgctgtgg cccacagcgg gaacatcgtt gcctctgaca
     9601 catagatttt acccgccccc tctcctattc ttttcagtat gatctcagga ggtttctatg
     9661 tgtggacgct ttgcccaatc ccaaacgcgt gaagattacc ttgcgcttct cgcggaagat
     9721 attgaacgcg atattccctt cgatcccgaa cccattggca gatacaacgt cgcgccggga
     9781 accaaagttc ttctgctcag tgaacgtgat gaacaccttc atctggatcc ggttttctgg
     9841 ggatatgctc ccggatggtg ggataaaccg ccgctgatta acgcccgcgt agaaactgcg
     9901 gccaccagtc gtatgtttaa accgctctgg caacatggtc gggcaatctg ttttgccgat
     9961 ggctggtttg agtggaaaaa agaaggcgac aaaaaacagc cttattttat ctatcgcgct
    10021 gatggacaac ctgtttttat ggccgcgata ggtagcacac cgtttgagcg tggtgacgaa
    10081 gccgaaggat ttttaattgt cactgctgca gcagaccagg gtctggtaga tattcatgac
    10141 cgccgcccgc tggttctgtc gccagaagct gcacaggaat ggatgcggca agagattggc
    10201 ggtaaagaag catcagaaat tgctaccaac ggctgtgtgc cagcaaacca gttcacctgg
    10261 cacccggtat cgcgcgcggt aggtaatgtc aaaaaccagg gcgcggagtt aattcaacct
    10321 gtttgttgac atcctccacg ccctgaagga cgaggatccc tgctacgttc aggctgtcgc
    10381 ctgaatcatt tcggtgggtt cctgcttcaa cgggcggcct gactgcacca tctctccaca
    10441 ggcaagaacg gcgtgccccg ccgctaaaat gttacgagcg ccatttacat cggcgttcgc
    10501 tgtatatcca catacctggc atctgaattt actttgtgac aggcggtttt ctttcgctgt
    10561 atgaccacag cacgcgc
//
LOCUS       DAPGWB010000154        10505 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.156, whole genome shotgun sequence.
ACCESSION   DAPGWB010000154 DAPGWB010000000
VERSION     DAPGWB010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10505
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.156"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            58..633
                     /gene="ssuE"
                     /locus_tag="RHX79_003788"
     CDS             58..633
                     /gene="ssuE"
                     /locus_tag="RHX79_003788"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HDV2198907.1"
                     /translation="MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAP
                     EDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVV
                     LPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTR
                     LDTALETFWQALHRRDVQVPDLLSLRGNAHA"
     gene            626..1585
                     /gene="ssuA"
                     /locus_tag="RHX79_003789"
     CDS             626..1585
                     /gene="ssuA"
                     /locus_tag="RHX79_003789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter
                     substrate-binding protein SsuA"
                     /protein_id="HDV2198908.1"
                     /translation="MRNIIKLALVGLLSVSTIAVAAESSPEALRIGYQKGSIGMVLAK
                     SHQLLEKRYPQSKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVG
                     VEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP
                     TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPY
                     AEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKP
                     VNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL"
     gene            1582..2727
                     /gene="ssuD"
                     /locus_tag="RHX79_003790"
     CDS             1582..2727
                     /gene="ssuD"
                     /locus_tag="RHX79_003790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMNH2-dependent alkanesulfonate monooxygenase"
                     /protein_id="HDV2198909.1"
                     /translation="MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGY
                     TGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRPSVTSPTVAARQAATLDRLSNGR
                     ALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLLGETVNFNGKHIHVRGA
                     KLLFPPIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAH
                     GRKIRFGIRLHVIVRETNDEAWQAAERLISHLDDETIAKAQAAFARTDSVGQQRMAAL
                     HNGKRDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAALGIDSFVLSGYPH
                     LEEAYRVGELLFPHLDVAIPEIPQPQPLNPQGEAVANDFIPRKVAQS"
     gene            2738..3529
                     /gene="ssuC"
                     /locus_tag="RHX79_003791"
     CDS             2738..3529
                     /gene="ssuC"
                     /locus_tag="RHX79_003791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter permease
                     SsuC"
                     /protein_id="HDV2198910.1"
                     /translation="MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEG
                     VVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQ
                     MLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARS
                     YGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREF
                     LQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEATV"
     gene            3526..4376
                     /locus_tag="RHX79_003792"
                     /pseudo
     CDS             3526..4376
                     /locus_tag="RHX79_003792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706852.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(4583..7195)
                     /gene="pepN"
                     /locus_tag="RHX79_003793"
     CDS             complement(4583..7195)
                     /gene="pepN"
                     /locus_tag="RHX79_003793"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HDV2198911.1"
                     /translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVR
                     HGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPERFTLKIINEISPAA
                     NTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGN
                     RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG
                     NLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV
                     LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL
                     GSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIH
                     TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV
                     KDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNS
                     VLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD
                     AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNE
                     MAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRN
                     ACLRFLAFGETHLADVLVSKQYHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWH
                     QDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFH
                     AEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLEN
                     LSGDLYEKITKALA"
     gene            7461..8663
                     /gene="pncB"
                     /locus_tag="RHX79_003794"
     CDS             7461..8663
                     /gene="pncB"
                     /locus_tag="RHX79_003794"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706850.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDV2198912.1"
                     /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD
                     DLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSN
                     DNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSAL
                     TAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQ
                     AHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASR
                     YQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQL
                     SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD
                     LPHIKKAS"
     gene            8832..10232
                     /gene="asnS"
                     /locus_tag="RHX79_003795"
     CDS             8832..10232
                     /gene="asnS"
                     /locus_tag="RHX79_003795"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HDV2198913.1"
                     /translation="MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDG
                     SCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGW
                     VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWV
                     STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET
                     YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKA
                     VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWG
                     VDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG
                     GSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN
                     VRDVIPFPRTPRNASF"
BASE COUNT         2375 a         2712 c         2832 g         2586 t
ORIGIN      
        1 tgaccgaatt gttatcaatg ttaacaaaaa aagaacaatt ggttataagg agagagtatg
       61 cgtgtcatca ccctggcggg tagtcctcgc tttccttctc gctccagctc cttgctggaa
      121 tatgcgcggg aaaaactaaa tggcctcgat gtagaggttt atcactggaa tctgcaaaac
      181 ttcgccccgg aagatctgct ttatgctcgt ttcgatagtc cggcactcaa gaccttcacc
      241 gaacagctgc aacaggctga tggactgata gtcgctacac ctgtgtataa agccgcctat
      301 tccggcgcgc tgaaaaccct gctcgacctg ctgccagagc gcgctttgca aggcaaagtg
      361 gtgctaccgc tggcgacggg cggtaccgtg gcccatctgc tggcggtcga ttatgccctt
      421 aaaccagttt taagcgcact gaaagctcag gagatcctgc acggcgtgtt tgccgatgac
      481 tcacaagtaa ttgattacca tcacagaccc cagttcacgc caaatctgca aacccgtctt
      541 gataccgcgc tagaaacttt ctggcaggca ttgcaccgcc gcgatgttca ggttcctgac
      601 cttctgtctc tgcgaggtaa tgcccatgcg taacatcatt aaactggcgc tggtgggatt
      661 gcttagcgtc tctacgattg cggttgctgc agaatcctcg cctgaagcgt tacgtatagg
      721 ctatcagaaa ggcagtattg gtatggtact ggcaaaaagc caccagttac tggaaaaacg
      781 ctatccgcaa tcaaaaatct cctgggtgga gttccccgcg ggtccgcaaa tgttggaagc
      841 gttaaacgtt ggcagtattg atctcggcag taccggggat attccgccaa tctttgccca
      901 ggctgccggg gctgatttgg tatatgtggg cgtcgagcca ccgaagccca aagccgaagt
      961 gattctggtg gcagaaaaca gcccgatcaa aaccgtagcc gatcttaaag gtcacaaagt
     1021 tgcctttcag aaaggttcca gttcacacaa ccttttactg cgtgcactgc gtcaggccgg
     1081 acttaagttt accgatatcc aacccactta cctgacgccc gctgatgccc gcgccgcgtt
     1141 ccagcaaggt aacgttgacg cctgggctat ctgggatccc tactactctg ctgcattatt
     1201 acagggcggc gtgcgggtgc tgaaagacgg caccgatctc aatcaaactg gatcgtttta
     1261 tctggcagct cgtccctatg cagaaaaaaa cggcgctttt attcagggcg tactcgcaac
     1321 ctttagtgag gccgatgcgt taacccgcag ccagcgcgag caaagcatcg ctttactggc
     1381 aaaaacgatg ggcttaccgg caccggtgat tgcctcttac ttagatcatc gccctcctac
     1441 caccatcaaa ccggttaacg ccgaggttgc cgccttacag cagcaaacgg cagatctgtt
     1501 ttatgaaaat cgtctggtgc cgaaaaaagt cgatattcgc cagcgcatct ggcagcccac
     1561 tcaactggaa ggaaaacaat tatgagtctg aatatgttct ggtttttacc gacccatggt
     1621 gacgggcatt atcttggaac ggaagaaggt tcacgcccgg ttgatcacgg ctatctgcaa
     1681 caaattgcgc aagcggcgga tcgtctgggc tataccggtg tgctgatccc aacggggcga
     1741 tcgtgtgaag atgcgtggct ggtggcggcg tcgatgatcc cggtgacgca gcggctgaag
     1801 tttcttgtcg ccctgcgccc cagcgtaacc tcacctaccg ttgccgctcg ccaggccgcc
     1861 acgcttgacc gtctctcaaa tggtcgtgcg ttgtttaatc tggtcacagg cagcgatcca
     1921 caagagctgg caggcgacgg cgtgttcctt gatcatagcg agcgctacga agcctcggcg
     1981 gaatttaccc aggtctggcg gcgcttattg ctgggggaaa ccgtcaattt caacggtaaa
     2041 catattcatg tgcgcggagc aaaactgctc ttcccgccga ttcaacagcc ttatcctccg
     2101 ctttactttg gcggatcgtc agacgtcgcc caggagctgg cggcagaaca agttgatctc
     2161 tacctcacct ggggcgaacc gccagaacta gtaaaagaga agatcgaaca agtgcgggcg
     2221 aaagctgccg cgcatggacg caaaattcgt ttcggtattc gtctgcatgt gattgttcgt
     2281 gaaactaacg acgaagcgtg gcaggccgcc gagcggttaa tctcgcatct tgatgatgaa
     2341 actatcgcca aagcacaggc cgcattcgcc cggacggatt ccgtaggaca acagcgaatg
     2401 gcggcgttac ataacggcaa gcgcgacaat ctggagatca gccccaattt atgggcgggc
     2461 gttggcttag tgcgcggcgg tgccggaacg gcgctggtgg gcgatggtcc tacggtcgct
     2521 gcgcgaatca acgaatacgc cgcgcttggc atcgacagct ttgtgctttc gggctatccg
     2581 catctggaag aagcgtatcg ggtcggcgag ttgctgttcc cacatctgga tgtcgccatt
     2641 ccggaaattc cccagccgca gccgctgaat ccgcaaggcg aagcggtggc gaatgatttt
     2701 atcccccgta aagtcgcgca aagctaagga agaaataatg gcaacgccag tgaagaagtg
     2761 gttattgcgc gttgccccct ggtttttacc ggtgggcatc gtggcggtgt ggcaactggc
     2821 ctcctcagtt ggctggctgt cgacgcgtat tttgccctca ccggaagggg tggtgacggc
     2881 gttctggacg ctctccgcca gcggcgaact gtggcagcat ctggcgatca gttcctggcg
     2941 ggcgctgatt ggcttttcaa ttggcggatc gctggggttg attttgggac tgattagcgg
     3001 gctatctcgc tggggagaac ggctgctgga tacctcaatt cagatgttgc gcaacgtacc
     3061 gcatctggcg ctgatcccgc tggtgatttt gtggtttggc attgatgaat ccgcaaaaat
     3121 ctttctggtg gcgctcggca cgctattccc catttatatc aacacctggc atggcatccg
     3181 taatatcgat cgcggtctgg tggaaatggc gcgtagctat ggattatccg gcataccgct
     3241 gtttatccat gtgatcctac ctggtgccct gccctcaatt atggtcggcg tgcgttttgc
     3301 gttgggcctg atgtggctga cgctgattgt tgccgaaacc atttctgcca attcaggcat
     3361 tggttatctg gcgatgaatg cgcgggagtt tttgcaaacg gacgtggtgg tagtcgctat
     3421 tattctttac gccctgctcg gcaaacttgc tgacgtcagc gcgcagctgt tagagcgcct
     3481 ctggttgcgc tggaacccgg cttatcattt gaaggaggcc acggtatgaa tactgctcgt
     3541 ctgaaccagg gcacaccatt gttgctcaat gcagtaagca aacattacgc ggaaaatatc
     3601 gtcctgaacc aactggattt acatattccg gcaggtcagt ttgtggcggt ggtgggccgc
     3661 agcggtggtg gcaaaagtac cctgctgcgc ctgctggccg ggctggaaac gccaaccgca
     3721 ggcgatgtgt tggcaggcac cacaccgctg gctgaaattc aggaagacac gcgaatgatg
     3781 tttcaggatg cgcgtctgct accgtggaaa tcggtgattg ataacgttgg gttaggcctt
     3841 aaaggccagt ggcgcgatgc cgcgcgtcgg gcgttggctg cggtaggact ggagaatcgc
     3901 gccggggaat ggcctgccgc actttcaggc gggcagaaac agcgagtggc gctggcaaga
     3961 gcgttgattc atcgaccggg tttattgttg cttgatgaac cgctcggggc actgggcaga
     4021 aacagcgagt ggcgctggca agagcgttga ttcatcgacc gggtttattg ttgcttgatg
     4081 aaccgctcgg ggcactggac gccttaacgc gactcgagat gcaggatttg attgtgtcac
     4141 tttggcagga gcacggcttt accgtactgt tggtgacgca tgatgtgagc gaagcggtag
     4201 caatggctga ccgggtgttg ttaattgaag agggaaaaat tggtctggat ttgacagtgg
     4261 atatcccccg tccgcgtcga ttagggtcgg tgcgattagc ggagctggaa gcggaagtat
     4321 tgcaacgggt aatgcggcgt gggcattctg aacaactgat tcggcgtcat ggttaatatg
     4381 ccggatgtgg cgcacaaaac cagcattttc aacggactag taggcctgat aagacacgtc
     4441 aagcatcgca tcaggcagtt gggcacggct gccggatgcg gcgtgaacgc cttatccagc
     4501 ctacaaaacc agcaatttca acggagttgt aggcctgata agacgcgtca agcgtcgcat
     4561 caggcatttt ggctcaaaag tatcaagcca gtgctttggt gatcttctcg tacagatcgc
     4621 cagagagatt ttccagccct ttcaactgtt ccagcgccgc gcgcattttc tcctgacgtt
     4681 tggcatcata acgtttcagg cgaatcagcg gttcaatcag acgtgaagct acctgcgggt
     4741 tacggctgtt gaggtcggta agcatttcca ccaggaactg gtaaccgctg ccatcttcgg
     4801 catggaacgc tgccgggttg ctgcccgcaa acgcaccaat caacgaacga atacggttcg
     4861 ggttgctcat ggtaaatgag cgatgctgca acagaccacg caccgtctcc agcacattcg
     4921 ccgccgggct ggtggcttgc aggataaacc atttatccat caccagaccg tcctgatgcc
     4981 acttatcgtc gtactcctgc atcagcgcgt cacggcaagg cagctgtgca gcaaccgccg
     5041 cagaaagcgc tgccagcgca tcggtcatat tgtttgcttc atggtattgc ttgctcacca
     5101 gcacgtcagc cagatgcgtt tcaccaaaag caaggaagcg caggcaggca ttacgcagag
     5161 tgcgttttgc aatatcttca tgctcaacac ggtactcgct ctggtaattc gcgttgtaaa
     5221 tagccagcag ctcatccgcc agttcagtcg ccagagtacg agtgagtgct tcgcgtactt
     5281 cggcaatagc aatcgggtcg atgatatcga acagttcagc catttcattg acagaaggca
     5341 gcgtcaggat ttctgccgcc agcgccggat caatcttctc atcgagcagc accgcgcgga
     5401 aagcgtcagc cacatgtacc ggcagagaca gcggctgccc ttgctgatga cgggcgacgt
     5461 tcagcttgat gtaggttgcc agcaaacttt gcgccgcatc ccaacgggag aaatcattac
     5521 gcgcatgacg catcaggaag gtcagttgct gatcgctcca cttatattcc agtttcactg
     5581 gcgcagagaa ttcgcacagc agcgcaggca ccggctggaa gtagacatta tcaaaaacaa
     5641 aggtctgttc cgcctgggtg acgttcagca cggaattcac cggatgaccg cctttctgca
     5701 acgggatcac tttgccttcg ttgtcataca attcgatggc aaatggaata tgcagcggct
     5761 gtttttctgc ctgatccggc gtggctggcg tgcgctggct gatggtcagg gtgtactgct
     5821 cggtttccgg attgtagtcg tctttgacgg tcacaatcgg cgtgccggac tggctgtacc
     5881 aacggcggaa atgggagaga tcgacattcg acgcatcttc catcgcctgc acaaagtcgt
     5941 cgcaggttgc cgcgctgcca tcatggcgct cgaaatagag ttgcatccct ttctggaagt
     6001 tttcttcgcc cagcagggtg tggatcatgc gaatcacttc cgcgcccttc tcgtaaacgg
     6061 tcagggtgta gaagttgttc atctcaatga ccatatccgg gcggatcggg tgcgccatcg
     6121 ggctggcgtc ttccgcaaac tgcaatccgc gcatggtgcg cacattattg atacggttta
     6181 ccgcgcggga accaaggtca gagctgaatt cctgatcgcg gaagacggtt aaaccttctt
     6241 tcaggctgag ctggaaccag tcgcggcagg tcactcggtt accggtccag ttatggaaat
     6301 attcatggcc gataacgcgt tcaatatcga gataatcttt gtcggtggcg gtgtcggtgc
     6361 gggccaacac atatttggag ttaaagatat tcagcccctt attctccatt gcgcccatat
     6421 tgaagaaatc caccgcgacg atcatataga tgtcgaggtc atactccagg ccaaagcgtt
     6481 cttcatccca tttcatggag tttttcagcg aggtcatcgc ccacggcgcg cgatcaaggt
     6541 tgccgcgatc gacgtacagc tccagtgcta cttcgcgacc agaacgcgtg gtaaaggtat
     6601 cgcgcagtac atcaaagtcg cctgccacca gcgcaaacag gtagcacggt ttcgggaacg
     6661 ggtcctgcca ctgtacccaa tggcgtccgt tttcgagttc gccttgcgca acgcggttac
     6721 cattggaaag caggaaggga tatttgattt tatcggcaat aattttggtg gtaaaacgcg
     6781 ccagcacgtc cgggcggtcg agataatacg taatatggcg gaaaccttcg gcttcacact
     6841 gggtgcaaag cgcatcgcct gactgataaa gcccttccag cgccgtattc gccgccgggc
     6901 ttatttcatt aatgatctta agcgtaaaac gctccggcaa attactgatg accagtgcgc
     6961 cctcttcttc tttccaggcg gtccacggct catcattaat atgaacagaa accagtttga
     7021 ggtcttcgcc gttgagacga agcggagcat ctgatgcacc atgacggaca gcctggctga
     7081 ccgcggtaac gaccgtcttt tgcgcgtcga ggtcaaaggt caagtcaata tcagtaatct
     7141 ggtaatccgg cgcacgataa tcgtgacggt atttggcttg tggctgttga gtcataaata
     7201 acctttagca tcttttatag agtctggtgt tcagtctatt cctgttgcgt aaatcgcgct
     7261 atgcagaatc ttcatctttt caggtacaaa cgcctttatt gctacatttt tataacatac
     7321 accgcgtaat gccatcgacc agaaaggtgg catatggtgt gatcggggtt caataaattg
     7381 cgaaacaagg tatactccag cagttcctga agatgtttat tgtactaaac gctcctgtac
     7441 gaggacgcta ctgcgcacct atgacacaat tcgcttctcc tgttctgcac tcgttgctgg
     7501 atacagatgc ttataagttg catatgcagc aagccgtgtt tcatcactat tacgatgtgc
     7561 atgtcgcggc ggagtttcgt tgccgaggtg acgatctgct gggtatttat gccgatgcta
     7621 ttcgtgaaca gattcaggcg atgcagcacc tgcgcctgca ggatgatgaa tatcagtggc
     7681 tctctgctct acctttcttt aaggccgact atcttaactg gttacgcgag ttccgcttta
     7741 acccggaaca agtcaccgta tccaacgata atggcaagct ggatattcgt ttaagcggcc
     7801 cgtggcgtga agtcatcctc tgggaagttc ctttgctggc ggttatcagt gaaatggtac
     7861 atcgctatcg ctcaccgcag gccgacgttg cgcaagccct cgacacgctg gaaagcaaat
     7921 tagtcgactt ctcggcgtta accgccggcc ttgatatgtc gcgcttccat cttatggatt
     7981 ttggcacccg tcgccgtttt tctcgcgaag tacaagaaac catcgttaag cgtctgcaac
     8041 aggaatcctg gttcgtgggc accagcaact acgatctggc gcgtcggctt tccctcacgc
     8101 cgatgggaac acaggcacac gaatggttcc aggcacatca gcaaatcagc ccggatctag
     8161 ccaacagcca gcgagctgca cttgctgcct ggctggaaga atatcccgac caacttggca
     8221 ttgcattaac cgactgcatc actatggatg ctttcctgcg tgatttcggt gtcgagttcg
     8281 ccagtcgcta tcagggcctg cgtcatgact ctggcgaccc ggttgaatgg ggtgaaaaag
     8341 ccattgcaca ttatgaaaag ctgggaattg atccacagag taaaactctg gttttctctg
     8401 acaatctgga tttacgcaaa gcggttgagc tataccgcca cttctcttcc cgcgtgcaat
     8461 taagttttgg tattgggact cgcctgacct gcgatatccc ccaggtaaaa cccctgaata
     8521 ttgtgattaa gttggttgag tgtaacggta aaccggtggc gaaactttct gacagccctg
     8581 gcaaaactat ctgccacgat aaagcgtttg ttcgggcgct gcgcaaagcg ttcgaccttc
     8641 cgcatattaa aaaagccagt taatatcatc agggagctaa tcggctccct ttttttacct
     8701 ttaattccga aatctttcgc tgcatttgcg aattctgctt gtctgattgc agatgccagg
     8761 taacataggt atccccccat ttacgggtgg acaagtgttt attttttccg actattaaca
     8821 gagagaatat tatgagcgtt gtgcctgtag ccgacgtact ccagggccgc gtagccgttg
     8881 acagcgaagt caccgtacgc ggatgggtac gtacccgccg agattcaaaa gctggcatct
     8941 ccttcctcgc cgtttatgac ggttcctgct ttgatcctgt acaggctgtc atcaataatt
     9001 ctctgcccaa ttacaatgaa gacgtcctgc gtctgaccac cggctgctcg gtcattgtga
     9061 cgggtaaagt cgtggcgtcg ccgggccagg ggcaacaatt tgaaattcag gccagcaagg
     9121 ttgaagttgc tggttgggtt gaagatccag acacttaccc gatggcggca aaacgccaca
     9181 gcattgagta tctgcgtgaa gtcgctcacc tgcgtccgcg cacaaacctg attggtgccg
     9241 tcgcgcgcgt tcgtcatacg ctggcgcagg cgctgcatcg cttctttaac gagcagggat
     9301 tcttctgggt ttcaacgcca ctgattaccg catctgatac cgaaggtgca ggcgaaatgt
     9361 tccgcgtttc tacgctggat ctggaaaacc tgccgcgtaa cgatcagggc aaagtggatt
     9421 tcgacaaaga cttctttggt aaagagtctt tcctgaccgt atctggccag ttgaacggcg
     9481 aaacctacgc ttgcgcatta tccaaaattt ataccttcgg cccgactttc cgtgctgaaa
     9541 actccaacac cagccgtcac ctggcggaat tctggatgct ggagccggaa gtggcgtttg
     9601 ctaacctgaa cgatatcgcg ggtctggctg aagccatgct gaaatatgtc ttcaaagcgg
     9661 ttctcgaaga acgcgcagac gacatgaaat tcttcgctga acgcgtagat aaagatgccg
     9721 tttcacgtct ggaacgcttc attgaggccg atttcgcgca ggtggattac accgacgcag
     9781 tgaccattct cgaaaactgc ggcaggaagt ttgaaaaccc ggtttactgg ggcgtcgatc
     9841 tctcttctga gcatgagcgt tatctggcgg aagaacactt taaagcaccg gtagtggtta
     9901 aaaactatcc gaaagatatt aaagcgttct atatgcgcct caacgaagac ggtaaaaccg
     9961 ttgcggctat ggacgttctg gctccgggca tcggtgagat cattggtggc tcccagcgtg
    10021 aagaacgtct ggacgttctg gacgagcgta tgctggaaat gggcctgaat aaagaagatt
    10081 actggtggta tcgcgatctg cgtcgctacg gtactgttcc gcattcaggt ttcggtcttg
    10141 gttttgaacg cctgattgct tacgtaactg gcgtgcaaaa cgtgcgtgat gtgattccgt
    10201 tcccacgtac tccgcgcaac gccagcttct gattttcttc ctcaaagagc cagcgcctgc
    10261 tggctctttt ttatcctttc tgtcaagtta tctgtttgtt aagtcaagca atctatttgc
    10321 aaccccgcca taacgatcat cctgttacgg aatattacat tgcaacattt acgcacaaaa
    10381 aataacccgc attcttattg cggattagtt ttttcttagc tgatagcaca attttcatac
    10441 tattttttgg cattctggat gtctgaaaga ggattttgtg ccagttcgat aaagtttcca
    10501 tcaga
//
LOCUS       DAPGWB010000155        10416 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.157, whole genome shotgun sequence.
ACCESSION   DAPGWB010000155 DAPGWB010000000
VERSION     DAPGWB010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10416
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.157"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(18..3659)
                     /locus_tag="RHX79_003796"
     CDS             complement(18..3659)
                     /locus_tag="RHX79_003796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001223552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDV2198914.1"
                     /translation="MRIVIDLQGAQTESRFRGIGRYSIAIARGIIRNNSRHEIFIALS
                     AMLDESIADIKAQFADLLPAENIVVWHAVGPVRAMDQGNEWRRESAELIREAFLESLC
                     PDVVFITSLFEGHVDDAATSVHKFSRQYKVAVLHHDLIPLVQAETYLQDDVYKPYYLQ
                     KVEWLKNADLLLTNSAYTAQEAIEHLHLQGDHVQNIAAAVDSQFCMAEVTASEKETVL
                     GHYGIQREFMLYAPGGFDSRKNFKRLIEAYAGLSDALRRSHQLVIVSKLSIGDRQYLE
                     SLASGNGLQQGELVLTGYVPEDELIQLYRLCKLFIFASLHEGFGLPVLEAMSCGAPVI
                     GSNVTSIPEVIGNPEALFDPYSVSSMRDKIAQCLTDDTFLARLKEMAQQQARNFSWDK
                     AAVTALEAFEKIAVEDTGTAQVLPEALIQKILAITQGQPDDRDLRLCATAIDYNLKTA
                     ELYQIDDKSLNWRVEGPFDSSYSLALVNREFARALSADGVEVLLHSTEGPGDFAPDAS
                     FMAQSENSDLLAFYNQCQTRKSNEKIDILSRNIYPPRVTKMDAKVKFLHCYAWEETGF
                     PQPWINEFNRELDGVLCTSEHVRKILIDNGLNVPAFVVGNGCDHWLNIPAETTKDVDH
                     VTFRFLHVSSCFPRKGIQAMLQAWGKAFTRRDNVILIIKTFNNPHNEIDAWLAQAQAQ
                     FIDYPKVEVIKEDISATELKGLYESCDVLVAPGCAEGFGLPIAEAMLSGLPAIVTNWS
                     GQLDFVNSQNSWLVDYQFTRVKTHFGLFSSAWASVDIDNLTDALKAAASTDKSVLRDM
                     ANAGRELLLQQFTWKAVADRSCQAVKTLRAHIDIAQHRARIGWLTTWNTKCGIATYSQ
                     HLVESAPHGADVVFAPQVSAGDLVCADEEFVLRNWIVGKESNYLENLQPHIDALKLDV
                     IVIQFNYGFFNHRELSVFIRRQHDAGRSVVMTMHSTVDPLEKEPSWNFRLAEMKEALA
                     LCDRLLVHSIADMNRLKDLGLTANVALFPHGVINYSAASVTRQQQSLPLIASYGFCLP
                     HKGLMELVESVHRLKQAGKPVRLRLVNAEYPVGESRDLVAELKAAAQRLGVTDLIEMH
                     NDFLPDAESLRLLSEADLLIFAYQNTGESASGAVRYGMATQKPVAVTPLAIFDDLDDA
                     VFKFDGCSVDDISQGIDRILNSIREQNSWATRTQQRADAWREQHDYQAVSRRLVNMCQ
                     GLAKAKYFK"
     gene            complement(3662..4939)
                     /locus_tag="RHX79_003797"
     CDS             complement(3662..4939)
                     /locus_tag="RHX79_003797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015365812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDV2198915.1"
                     /translation="MGSSFYRSFEERHRGSVEEIKRRLSFYLPFLAGLKDIYPDGVIA
                     DIGCGRGEWLEILTENGIANIGVDLDDGMLARAREAGLNVQKMDCLQFLQSQADQSLI
                     ALTGFHIAEHLPFEVLQQLVMHTLRVLKPGGLLILETPNPENVSVGTCSFYMDPTHNH
                     PLPPPLLEFLPIHYGFNRAITVRLQEKEVLQSPDAAVNLVDVLKGVSPDYSIIAQKAA
                     PTDILERFDTLFTQQYGLTLDALSNRYDAILRQQFSSVVSRLETLNQTYMQQISQMSE
                     TIQTLQGEVDDLSHVIDQNHQLHQQMADLHNSRSWRITQPLRWLSLQRQLLRQEGAKV
                     RARRAAKKILRKGMALSLVFFHRYPKSKVYLFKVLRKTGCYTLLQRLFQRVMLVQSDT
                     MMMQSRRYDVGTEEMTSRAMSIYNELKNKNTEK"
     gene            complement(4939..6153)
                     /locus_tag="RHX79_003798"
     CDS             complement(4939..6153)
                     /locus_tag="RHX79_003798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000120467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O8 family O-antigen ABC transporter ATP-binding
                     protein Wzt"
                     /protein_id="HDV2198916.1"
                     /translation="MSYIRVNNVGKAYRQYHSKTGRLIEWLSPLNTKRHNLKWILREI
                     NFEVAPGEAVGIIGINGAGKSTLLKLITGTSRPTTGEIEISGRVAALLELGMGFHSDF
                     TGRQNVYMSGQLLGLSSEKITELMPQIEEFAEIGDYIDQPVRVYSSGMQVRLAFSVAT
                     AIRPDVLIIDEALSVGDAYFQHKSFERIRKFRQEGTTLLLVSHDKQAIQSICDRAILL
                     NKGQIEMEGEPEAVMDYYNALLADKQNQSIKQVEHNGKTQTVSGTGEVTISEVHLLDE
                     QGNVTEFVSVGHRVSLQVNVEVKDDIPELVVGYMIKDRLGQPIFGTNTYHLNQTLTSL
                     KKGEKRSFLFSFDARLGVGSYSVAVALHTSSTHLGKNYEWRDLAVVFNVVNTEQQEFV
                     GVSWLPPELEIS"
     gene            complement(6153..6947)
                     /locus_tag="RHX79_003799"
     CDS             complement(6153..6947)
                     /locus_tag="RHX79_003799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001308747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O8 family O-antigen ABC transporter permease
                     subunit Wzm"
                     /protein_id="HDV2198917.1"
                     /translation="MRDLLTTIYRYRGFIWSSVKRDFQARYQTSMLGALWLVLQPLSM
                     ILVYTLVFSEVMKARMPDNTGSFAYSIYLCSGVLTWGLFTEMLDKGQSVFINNANLIK
                     KLSFPKICLPIIVTLSAVLNFAIIFSLFLIFIIVTGNFPGWLFLSVIPVLLLQILFAG
                     GLGMILGVMNVFFRDVGQLVGVALQFWFWFTPIVYVLNSLPAWAKNLMMYNPMTRIMQ
                     SYQSIFAYHLAPNWYSLWPVLALAIIFCVIGFRMFRKHAADMVDEL"
     gene            complement(6949..8325)
                     /gene="rfbK2"
                     /locus_tag="RHX79_003800"
     CDS             complement(6949..8325)
                     /gene="rfbK2"
                     /locus_tag="RHX79_003800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003596869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O9 family phosphomannomutase RfbK2"
                     /protein_id="HDV2198918.1"
                     /translation="MTQLTCFKAYDIRGELGEELNEDIAYRIGRAYGEFLKPGKIVVG
                     GDVRLTSESLKLALARGLMDAGTDVLDIGLSGTEEIYFATFHLGVDGGIEVTASHNPM
                     NYNGMKLVRENAKPISGDTGLRDIQRLAEENQFPPVDPARRGTLSKISVLKEYVDHLM
                     SYVDFSNFTRPLKLVVNSGNGAAGHVIDEVEKRFAAAGVPVTFIKVHHQPDGHFPNGI
                     PNPLLPECRQDTADAVREHQADMGIAFDGDFDRCFLFDDEASFIEGYYIVGLLAEAFL
                     QKQPGAKIIHDPRLTWNTVDIVTRNGGQPVMSKTGHAFIKERMRQEDAIYGGEMSAHH
                     YFRDFAYCDSGMIPWLLVAELLCLKNSSLKSLVADRQRAFPASGEINRKLRNAAEAIA
                     RIRAQYEPAAAHIDTTDGISIEYPEWRFNLRTSNTEPVVRLNVESRADVALMNEKTTE
                     LLHLLSGE"
     gene            complement(8349..9764)
                     /locus_tag="RHX79_003801"
     CDS             complement(8349..9764)
                     /locus_tag="RHX79_003801"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019725197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HDV2198919.1"
                     /translation="MLLPVIMAGGTGSRLWPMSRELYPKQFLRLFGQNSMLQETITRL
                     SGLEIHEPMVICNEEHRFLVAEQLRQLNKLSNNIILEPVGRNTAPAIALAALQATRYG
                     DDPLMLVLAADHIINNQSAFHDAIRVAEQYADEGHLVTFGIVPNAPETGYGYIQRGVA
                     LTDSAHSAYQVARFVEKPDRERAEAYLASGEYYWNSGMFMFRAKKYLIELAKYRPDIL
                     EACQAAVNAADNGSDFINIPHDIFCECPDESVDYAVMEKTADAVVVGLDADWSDVGSW
                     SALWEVSPKDEQGNVLSGDAWVHNSENCYINSDEKLVAAIGVENLVIVSTKDAVLVMN
                     RERSQDVKKAVEFLKQNQRSEYKRHREIYRPWGRCDVVVQTPRFNVNRITVKPGGAFS
                     MQMHHHRAEHWVILAGTGQVTVNGKQFLLSENQSTFIPIGAEHCLENPGCIPLEVLEI
                     QSGAYLGEDDIIRIKDQYGRC"
     gene            complement(10046..10330)
                     /locus_tag="RHX79_003802"
     CDS             complement(10046..10330)
                     /locus_tag="RHX79_003802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000088887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198920.1"
                     /translation="MSRLSHQSQHNAVVVCKELSSPNARCFSGGEYDVSSYLSSYRKC
                     PFLMVAGIGKSLDSFFLMAVRACVLPRVNEKVLMVTLAANVEIVGRFVAW"
BASE COUNT         2697 a         2806 c         2423 g         2490 t
ORIGIN      
        1 atacaagaga gatattttta tttaaaatat ttagctttag ctaagccttg acacatatta
       61 accagacggc gtgaaacagc ttgataatca tgttgttccc gccatgcatc ggcacgttgt
      121 tgagtcctgg ttgcccaaga gttctgttca cggatggaat tcaggatccg gtcaatcccc
      181 tgactgatat catcgacgct gcatccatca aatttaaaga cggcatcgtc caaatcatca
      241 aatatcgcca ggggcgttac cgcaacaggt ttttgagtcg ccataccata acgtaccgcc
      301 ccgctagcag actccccagt attctgataa gcaaaaatca gaagatcggc ttctgaaagc
      361 aaccgcagac tctccgcatc aggtaggaaa tcattatgca tctcaatcag atcggtaaca
      421 cctaaccgct gagcagcagc tttaagctct gccaccagat cgcgtgactc cccaacagga
      481 tactctgcgt tcaccagtcg taaacgaacc ggtttaccgg cttgcttgag tctatggacg
      541 gattctacta gttccatcag gcccttatgc ggtaagcaga agccatagct cgcaattagc
      601 ggtaaagact gctgttgacg tgtgacgctc gctgcggagt agttgataac accgtgcggg
      661 aataaagcaa cattcgcagt taagcctaaa tctttaaggc ggttcatatc ggcaatcgaa
      721 tgcaccaaca accggtcgca aagtgccagc gcctctttca tttcagcaag acggaaattc
      781 cagctcggct ctttttccag cggatccaca gttgagtgca tcgtcataac aactgaacga
      841 ccggcgtcat gctggcgacg aataaacacc gacagttctc gatgattaaa gaatccatag
      901 ttgaattgga tcacaatgac atcgagtttc agagcatcaa tgtgtggctg gaggttttcc
      961 agatagttgc tctctttacc tacaatccag ttgcgaagta caaactcttc gtctgcacac
     1021 acaagatcgc cagcgctgac ctggggagca aaaacaacat ccgcgccatg aggtgcgctt
     1081 tccaccagat gctgggaata ggttgcgatc ccacatttcg tgttccaggt cgtcaaccag
     1141 ccaatgcgcg cccgatgctg tgcaatatca atatgcgcac gcagagtctt gaccgcctgg
     1201 caagaacgat cagccaccgc tttccaggta aactgctgca gaagaagctc gcgaccagca
     1261 ttggccatgt cacgcagcac tgatttatcg gttgaggctg ccgcttttaa tgcatctgtt
     1321 aagttgtcaa tatccacact ggcccaggct gaggaaaaca gaccaaagtg cgtttttacc
     1381 cgagtgaact gatagtcaac cagccatgaa ttttgtgaat taacaaaatc aagttgcccg
     1441 ctccaattgg tgacgatagc cggtagccca ctcagcattg cttcagcaat aggtaaacca
     1501 aagccttcag cgcaacctgg agcaaccaaa acatcacagc tttcataaag ccctttaagc
     1561 tcggtggctg atatatcctc tttgatcact tcaactttgg gatagtctat gaattgagcc
     1621 tgggcctgag ccagccatgc gtcaatttca ttgtgcggat tgttaaaagt cttaatgatt
     1681 aagataacat tgtcacgacg agtgaacgcc ttcccccaag cctgaagcat tgcctgtatc
     1741 cctttgcgtg ggaaacaaga agagacgtgc aggaaacgga atgttacgtg atccacatct
     1801 tttgtcgtct cggctgggat attgagccaa tggtcacagc cattgccaac aacaaatgcg
     1861 ggcacattca gtccgttatc aatcaatatt ttacgaacat gttccgaagt acacagcact
     1921 ccgtcaagtt cccgattaaa ttcattgatc cacggttgcg gaaagcccgt ttcttcccaa
     1981 gcataacaat gaaggaattt tactttggca tccattttgg taacccgcgg tggatagata
     2041 tttctgctaa gaatatctat cttttcgtta ctcttgcggg tctgacattg attataaaat
     2101 gccagaagat cactattttc cgactgtgcc ataaaggagg catctggggc aaaatcaccc
     2161 ggtccttcag tggaatgcaa taagacctct acaccatcgg ctgagagtgc ccgggcaaat
     2221 tcgcggttga ccaacgccag actatatgag ctatcgaatg ggccttccac acgccagttc
     2281 agcgatttat cgtcgatttg ataaagttct gccgttttca gattgtaatc aatggccgtt
     2341 gcgcacaagc gcagatcgcg gtcatctggc tgcccttgtg tgatagcaag gatcttctga
     2401 atcaaagctt caggcaaaac ctgcgcagta ccggtgtctt ctaccgcgat cttttcgaaa
     2461 gcctccagag cagtcaccgc agctttatcc caagagaaat tacgcgcttg ctgctgcgcc
     2521 atttctttca gacgcgcgag gaaggtatca tcagtcaaac attgcgcgat cttatccctc
     2581 atggaagaga cagaatacgg gtcgaataat gcctcaggat taccgatgac ttcaggaata
     2641 ctggtgacat ttgagccaat caccggcgca ccgcacgaca ttgcttccag aaccggcaac
     2701 ccaaaacctt catgtagtga agcaaagatg aacagcttac ataggcgata gagctggatc
     2761 agctcatctt ccggcacata accagtgagt accagttcgc cttgctgtaa accattacct
     2821 gacgcaaggg attccagata ctgacgatca ccgatggaaa gcttactgac gataaccagt
     2881 tgatgactgc gacgtaaggc atcactgagc ccggcatagg cctcaatcaa ccgtttaaag
     2941 tttttccttg agtcaaatcc tccgggcgca tacaacatga actcgcgctg aataccgtaa
     3001 tggccaagga cggtctcttt ttcgctcgct gtcacctccg ccatacaaaa ctgagaatcg
     3061 actgcggctg caatattctg cacatgatcg ccctgtaaat gcagatgctc gatcgcttcc
     3121 tgtgcggtat aagcagagtt agtcaacaaa aggtcagcgt tttttaacca ctcaactttc
     3181 tgtaagtagt agggtttgta tacatcgtcc tgcagatagg tttccgcctg cacgaggggg
     3241 ataagatcgt ggtgcagtac ggctacttta tactgacgac taaatttgtg taccgatgta
     3301 gccgcatcgt cgacatgacc ttcaaacaag ctcgtaatga aaacgacatc tggacacaat
     3361 gattcaagaa acgcttcccg aatcagttct gcgctctccc gacgccattc attaccttgg
     3421 tccatcgcac gaacagggcc tacggcatgc catacgacta tattttctgc cggcaggaga
     3481 tcggcaaatt gcgccttaat atccgcaatc gactcatcca gcatggcgga tagcgcgatg
     3541 aaaatctcat gccggctgtt atttctgatt atgcctctgg cgattgcgat actataacga
     3601 ccgatgccac gaaagcggct ttccgtctgt gcgccttgta aatctatgac aatacgcatc
     3661 gttatttctc cgtattttta ttttttaatt cgttataaat actcatcgcg cgacttgtca
     3721 tttcttcagt acccacatca tatcttctgg actgcatcat catcgtgtca gattgcacca
     3781 gcattacgcg ttggaacaaa cgttgtagca atgtatagca gccagttttt ctcagaacct
     3841 taaacagata aaccttagac ttagggtaac gatggaaaaa gaccagcgag agcgccatcc
     3901 ctttgcgcaa tatttttttc gcagccctac gggctcgcac tttagcccct tcctgacgta
     3961 ataattgacg ttgcaaagac aaccagcgta gtggttgagt aatacgccat gaacgactgt
     4021 tatgtaaatc cgccatttgc tgatgaagct gatggttctg atcgatgaca tgactcagat
     4081 cgtcaacctc accttgcaaa gtctgaatag tctctgacat ttggcttatc tgttgcatat
     4141 aggtttggtt caacgtctcc agccgtgaga caacggacga aaactgttgg cgcaaaatcg
     4201 catcgtaacg gttgctcaga gcatccagcg tcagaccata ctgctgggta aacagggtgt
     4261 caaagcgttc aagaatatct gttggcgctg ctttctgagc aatgatgctg tagtcggggc
     4321 tcaccccttt gagtacatcg accaaattaa cggctgcatc cggagattga agaacctctt
     4381 tttcctgcag acgaacggta attgctctgt taaaaccata atgaataggt aaaaactcaa
     4441 gcagtggcgg tggcagagga tgattatgcg ttggatccat ataaaatgaa caggtgccga
     4501 cgcttacatt ctccgggttc ggcgtttcga ggatcagcaa accacctggt ttcagcaccc
     4561 gtagggtatg catgacgagc tgctgcagga cctcaaaagg caaatgctca gcaatatgaa
     4621 aaccggtcaa cgctatcagg ctctgatccg cctgactttg cagaaactgc agacaatcca
     4681 ttttctgcac attcagtccg gcctccctgg cgcgcgccag catgccatca tcgagatcga
     4741 cgccgatgtt cgcaatgcca ttttcagtca ggatctccaa ccattcgcca cgtccgcaac
     4801 caatatccgc aatcacgcca tcaggataaa tgtccttcag acctgcaaga aaaggtaaat
     4861 aaaaactcaa gcggcgcttg atttcttcaa ccgaacctct gtgtcgttct tcaaatgaac
     4921 gataaaacga cgaacccatt aagaaatctc cagttcaggc ggcaaccagg acacgccgac
     4981 aaactcttgt tgttccgtgt taacgacgtt gaataccacg gccagatcgc gccattcata
     5041 gtttttgccg aggtgcgtac tggaagtatg caacgcgaca gcgacagaat aggagccaac
     5101 ccccaatctc gcatcgaaag aaaataagaa cgaacgcttt tctccttttt tcagggaggt
     5161 gagtgtctga ttgagatggt acgtattggt cccgaaaatc ggctgtccaa gtcgatcctt
     5221 aatcatatat ccgacaacaa gctcaggaat atcgtccttg acctcaacgt tgacctgcaa
     5281 gctgacacga tgccctaccg aaacaaattc agtcacattg ccctgttcat cgagaagatg
     5341 aacctcagag atagtcacct caccagtgcc tgaaacagtt tgcgttttac cattatgctc
     5401 aacttgttta atggactgat tttgtttatc ggccagaagc gcattgtaat aatccatcac
     5461 tgcttcaggt tcaccttcca tttcaatttg gcctttattc aataaaatgg cccggtcgca
     5521 aatgctttgg atcgcttgtt tatcatggga taccagcaac agcgtggtcc cttcctgacg
     5581 aaattttcga atacgctcaa agcttttatg ctggaaatat gcatccccaa cagataatgc
     5641 ctcatcgata attagcacat caggacggat agccgtcgct acactaaaag ctaatcgaac
     5701 ttgcatccca ctggagtaga cgcgcacagg ctgatcgata tagtccccaa tctcagcaaa
     5761 ctcttcaatt tgcggcatca gttcagttat tttctctgac gataacccca acagttgccc
     5821 agacatataa acattctgcc ggccagtgaa atcagaatga aaccccatcc ccaattcgag
     5881 taatgcagcg acacgtccgg agatttcaat ttctccagtc gtcggcctgg acgtcccggt
     5941 tatgagttta agcagggtac tcttgcctgc accgttgata ccgataatac cgacagcctc
     6001 gcccggagcg acttcgaaat taatctcgcg gaggatccat ttcaagttat ggcgtttggt
     6061 attcagaggg gataaccatt cgatcagtct cccggtcttt gagtgatact ggcgatacgc
     6121 cttaccgaca ttatttactc tgatataact cattataatt catccaccat atccgccgca
     6181 tgcttgcgga acatcctgaa accgatgaca cagaaaataa tggcgagagc caatactggc
     6241 catagcgaat accagttggg ggccagatga taggcgaaga tggactgata agattgcatg
     6301 atccgagtca tcgggttata catcatcaga ttttttgccc atgcaggtaa tgaattcagt
     6361 acataaacaa tgggtgtgaa ccaaaaccag aattgcagcg caacgccaac cagttgcccc
     6421 acatccctga aaaagacgtt catgacacca aggatcatcc ccagcccacc ggcaaacagg
     6481 atttgcaaaa gcaggaccgg tatcaccgag agaaagagcc agccggggaa gttaccggtg
     6541 acaatgataa aaattagaaa cagactgaaa ataatcgcga aatttagcac cgccgataac
     6601 gtcacgatga tcggcagaca gattttcgga aaactgagtt tcttgatcag attagcattg
     6661 ttaataaata cgctctgacc tttatccagc atctcagtaa ataatcccca ggtcagtacc
     6721 ccggaacaga gataaatact ataggcaaac gacccggtat tatcgggcat tcttgccttc
     6781 atcacctcgg aaaaaaccag ggtatagacc agaatcatag agagcggttg taaaacgagc
     6841 catagtgcgc ccagcatact agtttgatag cgcgcctgaa aatcacgttt aacactgctc
     6901 cagataaatc cccgataacg ataaatcgtc gttagtaaat ctctcacctt attccccgct
     6961 taacaggtgt aacagctcgg tcgttttttc attcataagc gccacatcag ctctggactc
     7021 aacgttcaga cgcaccaccg gctcggtgtt agacgtgcgc aggttaaagc gccattcagg
     7081 gtattcaata ctgatcccgt ccgttgtgtc gatgtgtgca gccgccggct catactgcgc
     7141 ccggatgcgg gcgatcgcct cagccgcatt ccttagcttg cggttgatct ctcccgacgc
     7201 agggaacgcc ctctggcggt ccgccaccag cgatttcagc gagctgttct tcagacacag
     7261 cagctccgcc accagcagcc acgggatcat cccgctatcg cagtaggcga aatcgcggaa
     7321 gtaatggtgc gcactcatct ccccgccgta gatagcgtct tcctgacgca tccgctcctt
     7381 gatgaacgca tgccccgtct tcgacatcac cggctggccg ccgttgcggg tcacgatgtc
     7441 taccgtgttc cacgtcaagc gcgggtcgtg aatgattttc gctcccggct gcttctgcag
     7501 gaacgcctca gccagcaggc cgacaatgta atacccctcg ataaacgaag cttcgtcatc
     7561 gaacaggaag cagcgatcga agtcgccgtc aaaggcaatc cccatgtcgg cctgatgctc
     7621 gcgcaccgcg tcggcggtat cctggcggca ctccggcagc agcggattcg ggataccgtt
     7681 agggaaatgg ccatccggct ggtgatgcac cttgataaag gttaccggca ccccagccgc
     7741 cgcgaagcgt ttctccacct catcaatcac gtgccccgca gccccgtttc cggagttcac
     7801 caccaacttc agtggacggg tgaagttcga gaagtccacg tagctcatca gatggtcaac
     7861 atactccttc agtaccgata tcttgctcag ggtcccgcga cgcgccgggt ccactggcgg
     7921 gaactggttt tcctccgcca ggcgctggat atcccgcagg ccggtgtcgc cgctgatggg
     7981 cttcgcattc tcgcgcacca gcttcatgcc gttgtagttc ataggattgt ggctcgcggt
     8041 cacctcgatg ccaccatcta ccccaaggtg gaaggtggca aagtaaatct cttcggtacc
     8101 gctcaggccg atgtccagca cgtcggtacc ggcgtccatt aacccgcggg ccagcgccag
     8161 cttcagcgac tcgcttgtga ggcgcacatc gccccccacc actatcttcc cgggtttcag
     8221 aaattcgccg taggcgcgac cgatacggta ggcgatgtcc tcgttcagtt cctcacccag
     8281 ttcaccacgg atgtcataag ccttaaaaca agttaactgt gtcattctgc atcttgtccc
     8341 gaaaataatt agcaacgacc atactggtct ttaatacgaa taatgtcgtc ctcgccaagg
     8401 tacgcccccg actggatctc cagcacttcc agcggaatac agccagggtt ttccaggcag
     8461 tgctcggcgc caatcggaat aaaggtggac tggttctcgg acagcaggaa ctgcttaccg
     8521 ttgaccgtca cctgaccggt gccggcgaga ataacccaat gctcggcgcg atggtggtgc
     8581 atctgcatcg agaaggcacc gcctggtttc accgtgatgc ggttgacgtt gaagcgcggg
     8641 gtctggacca ctacgtcgca acggccccag gggcggtaaa tctcacggtg gcgcttgtac
     8701 tcgctgcgct ggttctgctt gaggaactcg accgccttct tcacgtcctg ggaacgctcg
     8761 cgattcatca ccagcacggc gtccttagtg ctgacaatca ccagattctc tacgccaatg
     8821 gccgccacta gcttctcgtc gctgttgatg tagcagtttt cgctgttgtg tacccacgcg
     8881 tcgccactaa ggacgttgcc ctgctcgtct ttcgggctga cctcccatag tgcggaccag
     8941 gagccaacgt cgctccagtc agcatcgaga ccgaccacca ccgcatcagc ggttttctcc
     9001 ataacggcgt agtccacgga ctcatccggg cactcgcaga aaatatcatg tgggatattg
     9061 atgaaatcgc tgccattatc ggcggcattc accgcagcct ggcaggcttc caggatatcc
     9121 ggacggtatt tggccagctc gatgaggtat ttcttggcgc ggaacataaa catgccgctg
     9181 ttccagtagt actccccgga ggcgaggtaa gcctcggcgc gctcgcgatc cggcttctcc
     9241 acaaagcggg ccacctggta cgcggaatgg gcactatcgg tgagcgccac gccgcgctga
     9301 atgtaaccgt agccagtttc cggggcattc ggcacgatac cgaaggtgac cagatgacct
     9361 tcatcagcat actgctcggc gacccggata gcgtcgtgga aggccgactg gttattgatg
     9421 atgtggtcgg cggcgagaac cagcatcagc gggtcgtcac cgtagcgggt ggcctgaagg
     9481 gccgccaggg cgatggccgg tgcggtgttg cgcccgactg gctcaagtat aatgttattc
     9541 gacagcttat ttagctggcg cagctgttca gccaccagga agcgatgctc ttcgttacag
     9601 atgaccatcg gttcatggat ttcaagaccc gagagtcggg tgatggtttc ctgcagcatg
     9661 gagttctgcc cgaacaggcg gaggaactgt ttcggataaa gctcgcgtga catcggccag
     9721 agacgactgc cggtaccacc agccataatt acaggaagta acataatgaa atccttaaat
     9781 aaataattgt tttattttac tatcaatcaa tcgaccaacg ggttgaatgg cttttttcag
     9841 gtacgctacc gccattggct atcgcaacca aaatgcgtag tgctcccgcg ctccaggcta
     9901 aacgccaccc tcttttgctt cagaatgtcg gcagcccctt cactcagcgg tctcaaaaac
     9961 catccttacg gaacgggcat cctgaaaacc taaaagcaga gatatgtctc agggcatatc
    10021 tctgctttta atatgtatct gttcctcacc aagccacgaa acgccccaca atttccacat
    10081 ttgctgccag agtaaccatc aggaccttct catttacgcg gggcaaaaca catgctctca
    10141 ccgccatcaa aaaaaacgaa tcaagtgatt taccgatgcc ggcaaccatc agaaaggggc
    10201 atttacgata cgaggaaaga taagaagaga catcgtattc gccgccagag aagcagcgcg
    10261 cgttcgggct tgacagctct ttgcacacga cgacggcgtt atgttgcgac tggtgggata
    10321 aacgactcat gcctctacac tgcacattcc acaaaaaaat cttcgcagat tatagcgttg
    10381 catgctggga aaaaaaatat aaaagccgac taatta
//
LOCUS       DAPGWB010000156        10376 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.158, whole genome shotgun sequence.
ACCESSION   DAPGWB010000156 DAPGWB010000000
VERSION     DAPGWB010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10376
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.158"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..96
                     /locus_tag="RHX79_003803"
     CDS             <1..96
                     /locus_tag="RHX79_003803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HDV2198921.1"
                     /translation="FNYIECDYNRWRRHSWCGGLSPEQFENQNLA"
     gene            complement(126..6723)
                     /gene="yeeJ"
                     /locus_tag="RHX79_003804"
                     /pseudo
     CDS             complement(126..6723)
                     /gene="yeeJ"
                     /locus_tag="RHX79_003804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416485.4"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter adhesin YeeJ"
     gene            complement(7037..7112)
                     /locus_tag="RHX79_003805"
     tRNA            complement(7037..7112)
                     /locus_tag="RHX79_003805"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7077..7079),aa:Asn,seq:gtt)
     gene            complement(7213..8010)
                     /gene="mtfA"
                     /locus_tag="RHX79_003806"
     CDS             complement(7213..8010)
                     /gene="mtfA"
                     /locus_tag="RHX79_003806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DgsA anti-repressor MtfA"
                     /protein_id="HDV2198922.1"
                     /translation="MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAE
                     RFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDE
                     WEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGD
                     RASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSE
                     YFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHRTNDTDSFSATNVH"
     gene            8104..8193
                     /locus_tag="RHX79_003807"
     tRNA            8104..8193
                     /locus_tag="RHX79_003807"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8138..8140,aa:Ser,seq:cga)
     gene            complement(8762..9292)
                     /locus_tag="RHX79_003808"
     CDS             complement(8762..9292)
                     /locus_tag="RHX79_003808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416483.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HDV2198923.1"
                     /translation="MNRFSKTQIYLHWITLLFVAITYAAMELRGWFPKGSSTYLLMRE
                     THYNAGIFVWVLMFSRLIIKHRYSDPSIVPPPPAWQMKAASLMHIMLYITFLALPLLG
                     IALMAYSGKSWSFLGFNVSPFVTPNSEIKALIKNIHETWANIGYFLIAAHAGAALFHH
                     YIQKDNTLLRMMPRRK"
     gene            complement(9635..10285)
                     /gene="zinT"
                     /locus_tag="RHX79_003809"
     CDS             complement(9635..10285)
                     /gene="zinT"
                     /locus_tag="RHX79_003809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-binding protein ZinT"
                     /protein_id="HDV2198924.1"
                     /translation="MAIRLHKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGV
                     FDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYA
                     TDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPK
                     YIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH"
BASE COUNT         2513 a         2408 c         2489 g         2966 t
ORIGIN      
        1 tttaattata tcgaatgtga ttacaatcgg tggcggcggc acagttggtg tggtggcctc
       61 agtccggaac aatttgaaaa ccagaacctc gcttaggcct gtgtccatat tacgtgggta
      121 ggatcaaagt tgtcattatt caactgataa tacgccccgg tgaacccctg cgaagggaat
      181 gtagttgtcg gtaggtcagt accattgact gatactgtac cgctcattat tttgtcttct
      241 gcgcgagtga attgtattgt ggtactcaga ccagcttgat gaacaccatt caatacaggg
      301 atcagcgttg cgataccctc tccgccgcct gtaacagtgg ctttgtaatc accgttgata
      361 tttagactgt aatcaattgc gctaattttc atatagggca cgttagtacc tgattgcaca
      421 aattccatcc cttcagaaac tttgatcgga ttgcctgata tatcgtgcaa aacaagatgt
      481 agctcagcac tatcggtaaa gtcccctttc agtgaggacc gattgttctt aaggacggac
      541 tgcgaggcgt ctgccgggcc tgccaccagc gttatatcta ctgtttgcat tccaccagcg
      601 gtcgtgactg cgcttaccgt gacgctacct gtcatcgctc ctttcacgct tgttgtcgcg
      661 attccgtttt gatcggtcac cgctgttaat gacgttaatg tggcagagcc gctttttaag
      721 gcgaagtaca cagtgagacc ttcgatcagg ttaccactgc catcctcaac cgttgccttt
      781 aaggtactta aatcactgtt ggtggcggcg atagtcgatg gatcagcgat aaagctagca
      841 acatgtgcgg tgcttgagtt gccagtgact ttcacggttg tctgtgtctg tattgttacg
      901 ccgttatgga acgatgcagt caccgtatat gtaccgactt tattgctggt cagaacgacc
      961 ggagcctgac ctgaagagtt agttctcact tttccgccac ttaacgtcgc cccttctggc
     1021 gttacgctaa agttgatgac ctgaccctcc actggagtgc catttgcaga ggttagcgtt
     1081 gccgtcagag tagtgcctgt aggggcatag acaccgataa gcggactgga cgccgtgagt
     1141 gtcagttttt catcaatagc ctccagttgt ttctcaagtg aggctccatt cgccagggat
     1201 gctttcacca tatacgaacc gtttctttcg ggcgtcatgg agacctcggc tataccatgc
     1261 gtatcagtag agacaatatt ttggctgatg gtcatgtgct ctggtggctc tgcactgaat
     1321 gttacagatt cattaagaat cgggttgcca aactggtcgt tgacgtgagc tttaactgct
     1381 acgtcttgtg cgaccattag ctgaccttca ggtatctcca gactggtaat cgttgcagaa
     1441 ttaatatctg cttttgcatt cagtaatcgc gatatgactt cagtaggttt atctgccaga
     1501 gaggctgaaa ctgttttcag tccgacttcg gtgcttgtca caagaatttc agcgaaaccc
     1561 tgatcatccg tttcaacgct ggtgctgctt agcgtgacgg aggttccgcg gaaattaact
     1621 tttatgcctt ctaccgggtt gccgttagcg tcagtgacgc ttgcagtcat ggtcgcgccc
     1681 tcggtcgtgc tgacgacgaa tgagtataca gaggttaagg aggctagtgt tgcggtacca
     1741 gcatcggcaa tcaaagtcac ctgtttcgta tcactgacac cataattgat cacgctaact
     1801 gtcacgggat aggtgccgga tttggtaccg ctcagtgtaa cttcagcctt gccgttgata
     1861 tcagtaatgg cggaaccgcc ttgtccgaga gtgaagcttg cgctcacatc tgccggtagc
     1921 gtgaatgtca ccgcctcatt ggcgaatggg ttgccgtttc catcagtcac tgttgcctgc
     1981 agcttggtca tcccaatgtt attggcgatg aaattgtcct cggtaacgtt aagattaacc
     2041 tgcgcagtga gcgtatccgc agtaaagttc accaccagtt gtccactctt actgccagcc
     2101 atcgatgctg taacagtatg agcgcctgct tttatacctt tcagcgtgac tttcgctttg
     2161 ccttcagtat cagtaatcgc tttaccgcca tcgctcagcg tgaagttcgc cctcacatct
     2221 tccggcagag taaatgttac ttcagtgttg gctatcgcat tgccctctgt atcagcgact
     2281 gttgctgtta gtgtcgtgag atcgttattg tcggcaatca ccggatcctt cgaggctgcc
     2341 agcgtgattt cggcattcgc gacgttcggc acataggtca ctgtttgttg catcgaatcg
     2401 ccattttcga gggttgccgt cacttgataa accccggctt ttgtagcggt aaagcttgtg
     2461 taaaaattgc cgtcgtggtt ggtagtatat atagcgttat tactgggggt cacgccttca
     2521 cttggtgata ctctgagggt tacctcctgc tggggtacac cgttgccgta attatccttc
     2581 acctcaatat acagattggt agtgtcgcct gcggagactg tatcaaaaag tgcctgtagc
     2641 aaggtgagat gtgccgtaga cgcatcagcg ttgacattaa ttgatgtgct aagcgtggag
     2701 ctaccatttt ccagactggc ctcaacggta tccggtctcg ctcctgattc tatcgaggag
     2761 cgggtattgg tataagtgac ggtagcctta ccctgttcgt tcgttacggc ttggccgcca
     2821 ttcgtcattt cggcagagtt tgttctgctg gtgaagttca cagtcacacc tttcaccgga
     2881 aagccattat tatcaacgac tgtggcggtg atgacgctgc cggagctgtt ctgcggggta
     2941 ccggcgatta tgctgtctgg gacaggcgtc aactcgataa tttttgccgc cgctgtgtcg
     3001 ccaataaaat gcacagtttt gttgtcgctg gcaccattat tagccagtga tgcagtgacc
     3061 gtctgctcac caaaggcaac gcctgcgaga gtggcctgcg cgatgccaga ctcattggta
     3121 ttacttactc ccggggtcag ggtgagtcct gaagaggctg agctgaatgt taccggaaga
     3181 ttattcacct cattgtcgaa ctgatcttta accgttgcag ttagcgttgc gttatcgacg
     3241 ccattacctg tgatctcatc ttttgacatc tgcaggacaa cctgagccga ggttttgtcc
     3301 gccacaaacg ttaccggctg cgaatcactg gtattgttat tacccagcgt tgcggtaacc
     3361 gtatgcgtac ccgctttttt acctttcagc gtgacatgcg cttccccatt ggcttgggtg
     3421 atggcaatgc cgttattttc gagggtaaag tttgccgcaa cgtcctgtgg catggtgaag
     3481 ttgaccgtta tccccgccac cggatgattc gacggatctt tcactgttgc tgtcagagtt
     3541 gtctcatcca cgccattccc aatgatttcc gctttcgatg tttgcagaac gacaaccgct
     3601 ctgtctttat ccgccacaaa cgtcattggc tgtgtatcgc tgacattgct gttagccaga
     3661 cgagccgtga tcatatgcgt gcccgctaac gtgccggtca gggaggcgat tgcagtcccg
     3721 ttgctatccg tcatgccttt tccgctgttg ctaatcgaga actgacttgc gacgtcgttt
     3781 ggcacagaga aggtgatttc tttatctatt agtgggttgc catttttatc ctgcaaggtt
     3841 acagtcatat gtagcggagc tgtgttggtg acggtgatat cacctgaagg cacactgagg
     3901 gtcagggctg cagtactttg atcaccgata aaaatcacct gttgattagc ctgagaacca
     3961 gagctcacag aggccgtaac cgtataatca ccatttttca aactggtcag cgtagctgtg
     4021 gcgatcccgt cgtggctatt cacttcggtt tggctcagtt tcgcctctga tgaattaaca
     4081 ttgaaagtga ccttgacgtc attgagcagg ttgccttttg catcccggac ggtcgcggtc
     4141 attgtggcgc tgtcattgcc gtcagcaacc acttcatttt tcgacttctg cagatcaacc
     4201 tgcgcggtac tcgagtcgcc gacaaaactg acgattaacg tttgtttcac gccattttca
     4261 agggtgactt caaccgtgtt gtcttcctgc ttactacttt tcagatcaaa agtcgccaga
     4321 ccattaacat ccgtttttgc ggtgttttga ttgttgaagg aagttgccga tccgctcaat
     4381 accgcaaacg tgacggtatg atcattgatt gggttgcttc cttcatcagc gacattgacc
     4441 gagacggtgt ttgctgcatt ctcattggcg agcacaccat tattgctggc agataatgtc
     4501 gcaattttcg ctgactgcgg gttggcgtcg atgataaatc cagcggtatg taaatcttca
     4561 ttccagtttt gcattaatag cttcgcagta agcccactgc ctttggtata ggcggtatag
     4621 gttgccttat agacgccatc tgcggtttct ttccagtctg tagtgacacc aggtttcaca
     4681 ttgtcgatgc tgactgcggt attcagttgc tgtttttgct ccttaacagg tttgtcattt
     4741 tcatctctca gttctaccgt cacctcgata ggattcccgg agagataacg gtccttatca
     4801 atcttaattg acgagtgagt ccgggatgac gaaacagaaa tgatattcac cacggcgggg
     4861 gctttagccg catccacacc gttcagctgt ggcataagcg tcagcgtgcc agacatcgct
     4921 cctgtggtca ggatctgggt atagcttccg tcaccattat ctttccagtc agaaagggtg
     4981 atgtcctgaa caccttcgtg acgcgtcgag agcaccagcc cgataacagg attacctgct
     5041 gcatcatgcg caataaaagt cagtgtggcg gttgaatggg aatccgcgct caatgtctgg
     5101 gtacttaacg ataccgagga atctttctgg cttagcgtag gtgcctgaac gactaccatg
     5161 ctctgttcac gattcgaaaa attgcctttg acatcttcag cggtgacttc aatcggccag
     5221 gtgttatcgg tttctggcgt actggtgaac cggtacgccg gcagggtaac cagaatatct
     5281 ttacccgttg taaccacttt accaccggca gcttccagag cggtggcttc gacgttatag
     5341 cctttcaggg catatttggt ttgtagcgac gaaaccagtg atttcacttc tcctgacttc
     5401 cctgtcacgg ggtctgtcag ggtcaggcgg accagttctt ttttgcgata ttccagaacg
     5461 atgttgttgt tgcgatccac cagatcataa cggctgcctg caaggctacg ccgtgcagcg
     5521 acttcattcg agtcaagctg tttctgcatt gcgctgccag gttgccaggt aaaatcgacg
     5581 gcaaaacggg tgtcattttc gccctgttta ccctggcgtt gctccgcgct gaaggtcatt
     5641 agcgggaagg gggtatagtt aagtccagcg gttatggcat gaggattact ttgccgatcg
     5701 tctttatcga acagggccac ttcatcgcca taatactgtt catagaccag tttaccgcca
     5761 aggtgcggcc aggcgggtag ccagccttct gcgcgtacat cccagccatt ggccgggcgt
     5821 gcttcataat cgttgtccag ttcaggtgcg ctgcgccagt tggtcagtcg caaatagccg
     5881 ttactgctta attttagata gtcgcgccag tactccgcgc caatgccggc gcgggagtgg
     5941 taacggctaa gatcgtggtc gaaaaagaag ttgatgcccg acatccatgt gggagtgaaa
     6001 tgacgccaac ctaagccgtt gttaatctgt gtacgctcgt cagtacgatg gagagtatgc
     6061 tgactgaaaa agagattatc aggcgtttca taccacggat ggagaaaatc gaactgggag
     6121 ttcttcaggc taaaatcttc atccacgccc agcgtgattc ttgcggtacc gaagcggctt
     6181 aaccagtctg tcattgcgcc tgaagcctga gaagaggccc atccacgcgc catatttgcc
     6241 gcttgctcgc tgttcatatc ctcggcgagc agagacccga tttgctgtga agtactggct
     6301 atctgttgct caaggttgcc gctgctatta cccggtggcg gggttaaatt attttcacta
     6361 acttgtgccg ggacatccag ttcatcaccc tggcggacat tatcaaaacc tcgagcaaac
     6421 gtacgaaact ggttgagttt gcgtaactca gccaccgaaa taccgaaacg ttcggcaacg
     6481 ctttgggccg atttccagcg ctccaagggt gtagggcacc gtattggcat ttgcaatggc
     6541 gagttgtgca ggaactggtt gttgggttgc ggcgtttacc acaccttgtg ctgccgcagt
     6601 catagggaac gcaagttgag ttatcaggca gatacccgca gttaagcggc gtagtttaat
     6661 tcccatcccg cataagattt gtcggtcatt tatttcttct ccacttctct tcttcgtagc
     6721 catgcttacc ttccctgaac gagctaacat acatgcgccc tttctagcac agcgaaaaaa
     6781 tgtaaatcct gatagcaata tgattgaaaa ttaataactt ttcgttaggc agttttgggt
     6841 gtgagttgca agaggggaga ctactgaata actcaagttt tataatcgag gggaaaatgg
     6901 tgatggcgtt catagcaaaa cgccctcaac cataaaggtc gagggcgctt aagatgttaa
     6961 aaacccgcta tccgttaaaa aacaatgttc aactaaggtc agtgacattg cgctaaaaaa
     7021 gcgaattttt agaatttggc tcctctgact ggactcgaac cagtgacata cggattaaca
     7081 gtccgccgtt ctaccgactg aactacagag gaatcgtgtg aacggggcgc atattactta
     7141 gcggtacctt gtctgtcaac actaaatttc ataagtcatt tcaattggtt aattaatttg
     7201 caaagttgtt aattaatgaa cattcgtcgc cgaaaacgag tctgtatcat tagtgcgatg
     7261 cagtctctgc aaaggatctt gttgataaaa ttggcagaaa cgttgccaca atgaagggaa
     7321 acgaggagca aaaagttctg gggcgctaaa gaaatattca gaaagtacgg caaaacattc
     7381 agcaggatca ctggcagcat aagcatcaat gctcgccgca ttctcgccaa ccaattcgat
     7441 ttcttcctga atgttgttca ttgcagcatg aagatcgtgt tcccagccag caacctcacg
     7501 caacggaata aagggaactc cgctggcgcg atcgccgtta cgggtgtcca gcttatgagc
     7561 gacttcatga ataatcaggt taaaaccaga agcatcaaaa gaatcttgta tatccaacca
     7621 gttcaaaacg ataggccctt gctgccagct ctgacctgac tgaacaatac gttggttatg
     7681 caccagaccg atatcgtctt cccattcatc atcgaccaca aatggcgcag gataaattaa
     7741 gacttcatga aaaccatcca gccattccag tcctaactcc agaacgggta ggcaaaatag
     7801 aagtgctatc cggcagcttc ttaatgaatc cagttcaaag ccctgtaaag gaacaagccg
     7861 cttttgctgt aaaaaacgtt cggcaagagt gactaatttg ctttgttcct gttccgtcag
     7921 acacgttaaa agggggatcg atagtgcttc ctgccaggga agggcagttt gatgtgctga
     7981 ttcttgtact ttccagggcc acttaatcat cgttttgctc gcaaactcgt cacttgaaca
     8041 aaattgcacg gacagggact gttaaaatgc caaatttcct ggcatcatgg caaccatctg
     8101 aacggagaga tgccggagcg gctgaacgga ccggtctcga aaaccggagt aggggcaact
     8161 ctaccggggg ttcaaatccc cctctctccg ccactttatc aatgacttat ctcccgactt
     8221 cccgccttgc ttttcctaaa cagaacaatc gtagaatatt cttgaagggt tagatcgtca
     8281 ctgttttctg ttcgatactg tgacattcag cacttgattc ctatggatct gacaggaagc
     8341 tttcgagcga aaatgtgcag ttattcagtc gttttcttat cgctcaccat tattctttta
     8401 gacattcatc ctatgaaact gccgcaaagt tggtggtggg aactgaagtt gcgtagagaa
     8461 ggggtcaata attgagtcaa aaaaggaacg cggccgtcag attaaagccg cgggacaaag
     8521 tccataattt ccaagagttg ttgaatttcc cagctttttt gaaagccttt gtatcatact
     8581 aacaagtaaa aaaggtttaa ataccaaaat taacctgtat ttttgataag tcttaccatt
     8641 gtacgattta cacagtttct gctcctcctt gttgatagtg gaaagggtgc attgtgcact
     8701 tgcgtaaaca tttatgacgc gttgatgtcc atggttcaca tttccttgtc aggggatcga
     8761 cttatttgcg gcgaggcatc attcgtaaca gagtattatc tttctgaatg tagtgatgaa
     8821 agagtgctgc gccagcgtga gctgcgatta aaaagtaacc tatatttgcc caggtttcgt
     8881 gaatattttt tatcagtgct ttaatttcgc tgtttggggt aacaaaggga gacacattga
     8941 aaccaaggaa actccacgat tttccactgt aagccatcaa agcaatcccc agcagaggaa
     9001 gtgcaaggaa ggttatataa agcatgatgt gcattagcga agccgctttc atttgccagg
     9061 caggtggcgg tggtacaata gaaggatcac tataacggtg ttttataatc aggcgtgaaa
     9121 acattaacac ccaaacgaat atacccgcat tgtaatgtgt ttctcgcatc agcagataag
     9181 tactactacc tttaggaaac cagccacgga gttccatcgc ggcataggtt attgcaacga
     9241 aaagcagcgt tatccaatgt aaataaattt gagtttttga gaatcggttc atttttgtag
     9301 ctcctgtaat ttttacagtc aagctatccc acgaacctta aaaaatcctt atacagatgt
     9361 ggttttaaga atttgttatt taaaaaattg atagtgcaca ttgtaaccag ccaatataag
     9421 caatggcgtg agcacaggta tctttctctg ttggccgtat tgtgtatgga atccgttatt
     9481 ggttaactca atgcgggtta gcttattaat atacagacac gtcatagtga tgagcgtgtc
     9541 tgtagctagc ttgcgttcag tggcgtttgt ggatggacca gtggcagtta tgatgactta
     9601 ctaaagcggc atcgaggcgt tatcatgaga atactcaatg agacatcatt tcctcgacca
     9661 cttcttcgct actcaactga tatggataat acgttggcca gttttccatt tcatttaata
     9721 aagattgctg tgaatcatta cccataaaaa tgtgaaaatg agatgatttt cgtggtgcaa
     9781 ttatatgatc gctaaattgt atatatttag gggctttgct ttcaggatct ttacattcga
     9841 ataagtaacg aacgcctttc ttgcctgatt tataggtgag tattttgtat ccatcgtaat
     9901 catatttaca ggatgttgtt tcattatttc tatggaattc aacaatgccg tcctcaatgc
     9961 caatcatctc gatatctgtt gcataacctt tgtgataata atctttaatt tcagcaaatg
    10021 ttttagtttt atctgcatcc gctttcttct gaaagacggg gtcaagtttg ccactttgca
    10081 gtaaaggata aacggattgc cagactccat cccagtcact gagcgttcgg ttttgtacat
    10141 tggcatcatc aaaaacacca ttagcagctt tttgttcgac ctctgttaag ggtttgccgt
    10201 gtgagtgatg accatgcgaa aaggcaggag cgctaacaat aaagacacct aaagcaacag
    10261 ccagtttgtg aagacgaatc gccaaaacag tttcctccag agtcattgta tatgatgtgt
    10321 gatgttatat tgtaacatat ggcaaaatgc aacaactctt aggagatgag agcata
//
LOCUS       DAPGWB010000157        10113 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.159, whole genome shotgun sequence.
ACCESSION   DAPGWB010000157 DAPGWB010000000
VERSION     DAPGWB010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10113
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.159"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(79..855)
                     /gene="yaaA"
                     /locus_tag="RHX79_003810"
     CDS             complement(79..855)
                     /gene="yaaA"
                     /locus_tag="RHX79_003810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HDV2198925.1"
                     /translation="MLILISPAKTLDYQSPLTTMRYTLPELLDNSQQLIHEARKLTPP
                     QISTLMRISDKLAGINAARFHDWQPDFTPENARQAILAFKGDVYTGLQAETFSEDDFD
                     FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA
                     AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF
                     IIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR"
     gene            complement(925..2355)
                     /locus_tag="RHX79_003811"
     CDS             complement(925..2355)
                     /locus_tag="RHX79_003811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDV2198926.1"
                     /translation="MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFG
                     KSLKNSIHPQPGGLTSFQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIG
                     MATSFAECSLAQLYKERDVNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSG
                     VQANAVARALSFSFDFPPLVTGIILAVFTLLAITRGLHGVARLMQGFVPLMAIIWVLT
                     SLVICVMNIGQLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMG
                     STPNAAAAAASWPPHPAAQGIVQMIGIFIDTLVICTASAMLILLAGNGTTYMPLEGIQ
                     LIQKAMRVLMGSWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNNPKAIWCLRIC
                     TFATVIGGTLLSLPLMWQLADIIMACMAITNLTAILLLSPVVHTIASDYLRQRKLGVR
                     PVFDPLRYPDIGRQLSPDAWDDVSQE"
     gene            2634..3587
                     /gene="tal"
                     /locus_tag="RHX79_003812"
     CDS             2634..3587
                     /gene="tal"
                     /locus_tag="RHX79_003812"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDV2198927.1"
                     /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ
                     IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS
                     YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS
                     FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY
                     ETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARI
                     TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL"
     gene            3702..4289
                     /gene="mog"
                     /locus_tag="RHX79_003813"
     CDS             3702..4289
                     /gene="mog"
                     /locus_tag="RHX79_003813"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDV2198928.1"
                     /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELET
                     RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ
                     MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAAGNVVVHGIFA
                     SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE"
     gene            complement(4324..4890)
                     /gene="satP"
                     /locus_tag="RHX79_003814"
     CDS             complement(4324..4890)
                     /gene="satP"
                     /locus_tag="RHX79_003814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HDV2198929.1"
                     /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF
                     YGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY
                     LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC
                     GASAIYLAMGEVLNEQFGRTVLPIGESH"
     gene            complement(5039..5752)
                     /gene="msyB"
                     /locus_tag="RHX79_003815"
     CDS             complement(5039..5752)
                     /gene="msyB"
                     /locus_tag="RHX79_003815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HDV2198930.1"
                     /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLM
                     RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL
                     KADKEMSTFEIEQQLLEQFLRNTWKNMDEEHKQEFLHAIDARVNELEELLPLLMKDKL
                     LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVT
                     IPAVLQIACLRRMVSATQV"
     gene            complement(5778..6182)
                     /locus_tag="RHX79_003816"
     CDS             complement(5778..6182)
                     /locus_tag="RHX79_003816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2541 family protein"
                     /protein_id="HDV2198931.1"
                     /translation="MKSVFTISASLAISLMLCCTAQANDHKLLGVIAMPRNETNDLAL
                     KLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININS
                     DNDNKRCVSKITFSGHTVNSSDMATLKIIGDD"
     gene            6559..8475
                     /gene="dnaK"
                     /locus_tag="RHX79_003817"
     CDS             6559..8475
                     /gene="dnaK"
                     /locus_tag="RHX79_003817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDV2198932.1"
                     /translation="MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ
                     DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW
                     VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI
                     AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV
                     LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA
                     QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI
                     DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL
                     DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD
                     NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN
                     EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE
                     SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD
                     DVVDAEFEEVKDKK"
     gene            8564..9694
                     /gene="dnaJ"
                     /locus_tag="RHX79_003818"
     CDS             8564..9694
                     /gene="dnaJ"
                     /locus_tag="RHX79_003818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDV2198933.1"
                     /translation="MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAE
                     AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF
                     GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT
                     CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA
                     GVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL
                     GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN
                     EKQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR"
     gene            complement(9798..9950)
                     /gene="mokC"
                     /locus_tag="RHX79_003819"
     CDS             complement(9798..9950)
                     /gene="mokC"
                     /locus_tag="RHX79_003819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin MokC"
                     /protein_id="HDV2198934.1"
                     /translation="MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVF
                     TAYESE"
BASE COUNT         2662 a         2534 c         2620 g         2297 t
ORIGIN      
        1 attctgcaat atattgaatc tgcatgcttt tgtaggccgg ataaggcgtt cacgccgcat
       61 ccggcattga ctacaaactt aacgctgctc gtagcgttta aacaccagtt cgccattgct
      121 ggaggaatct tcatcaaaga agtaaccttc gctattaaaa ccagtcagtt gctctggttt
      181 ggtcagccga ttttcaataa taaaacgact catcagaccg cgtgctttct tagcgtagaa
      241 gctgattatc ttaaatttgc cgttcttctc atcgaggaac accggcttga taatctcggc
      301 attcaatttc ttcggcttca ccgatttaaa atactcatct gacgccagat taatcaccac
      361 attatcgcct tgtgctgcga gcgcctcgtt cagcttgttg gtgatgatat ctccccagaa
      421 ttgatacaga tctttccctc gggcattctc aagacggatc cccatttcca gacgataagg
      481 ctgcattaaa tcgagcgggc gcagtacgcc atacaagccg gaaagcattc gcaaatgctg
      541 ttgggcaaaa tcgaaatcgt cttcgctgaa ggtttcggcc tgcaagccgg tgtagacatc
      601 acctttaaac gccagaatcg cctggcgggc attctccggc gtgaaatctg gctgccagtc
      661 atgaaagcga gcggcgttga tacccgccag tttgtcgctg atgcgcatca gcgtgctaat
      721 ctgcggaggc gtcagtttcc gcgcttcatg gatcaactgc tgggaattgt ctaacagctc
      781 cggcagcgta tagcgcatgg tggtcaacgg gctttggtaa tcaagcgttt tcgcaggtga
      841 aataagaatc agcatatcca gtccttgcag gaaatttatg ccgactttag caaaaaaaga
      901 gaatgagttg atcgatagtt gtgattactc ctgcgaaaca tcatcccacg cgtccggaga
      961 aagctggcga ccgatatccg gataacgcaa cggatcaaac accgggcgca cgccgagttt
     1021 acgctggcgt agataatcac tggcaatggt atgaaccaca ggcgagagca gtaaaatggc
     1081 ggtcaaattg gtaatagcca tgcaggccat tatgatatct gccagttgcc acatcagcgg
     1141 aagacttagc aaggtgccgc cgatgaccgt tgcgaaggtg cagatccgca aacaccagat
     1201 cgctttaggg ttgttcaggc gtaaaaagaa gagattgttt tcggcataaa tgtagttggc
     1261 aacgatggag ctgaaggcaa acagaataac cacgagggta acaaactcag caccccagga
     1321 acccattagc acccgcatcg ccttctggat aagctgaata ccttccagcg gcatgtaggt
     1381 tgtgccgtta cccgccagta atatcagcat ggcgcttgcc gtacagatga ccagggtgtc
     1441 gataaaaatg ccaatcatct ggacaatccc ttgcgctgcc ggatgcggag gccaggacgc
     1501 agctgccgct gctgcgtttg gtgtagaacc cattcccgcc tcattggaaa acatactgcg
     1561 ctgaaaaccg ttagtaatcg cctggcttaa ggtatatccc gccgcgccgc ctgccgcttc
     1621 ctgccagcca aaagcactct caaaaataga ccaaatgacg tggggaagtt gcccgatatt
     1681 cattacgcaa atcaccaggc tggtcagtac ccagattatc gccatcaacg ggacaaaacc
     1741 ctgcatgagc cgggcgacgc catgaagacc gcgagtgatt gccagcagag taaagacagc
     1801 gagaataatg cctgtcacca gcgggggaaa atcaaaagaa aaactcaggg ctcgggcaac
     1861 ggcgttcgcc tgaactccgc tgaaaattat gccataggcg atgagcaaaa agacggcgaa
     1921 cagaacgccc atccaacgca tccccagccc gcgcgccata taccatgccg gtccgccacg
     1981 aaactgtcca ttgacgtcac gttctttata aagttgtgcc agagaacatt cggcaaacga
     2041 ggtcgccatg ccgataaacg cggcaaccca catccaaaag acggctccag gtccaccggc
     2101 ggtaattgcc agcgcaacgc cggccaggtt gccgctaccc acgcgcgccg caagactggt
     2161 acacaatgac tgaaatgagg ttaaaccgcc tggctgtgga tgaatgctat ttttaagact
     2221 tttgccaaac tggcggatgt agcgaaactg cacaaatccg gtgcgaaaag tgaaccaaca
     2281 acctgcgccg aagagcaggt aaatcattac cgatccccaa aggacgctgt taataaagga
     2341 gaaaaaatct ggcatgcata tccctcttat tgccggtcgc gatgactttc ctgtgtaaac
     2401 gttaccaatt gtttaagaag tatatacgct acgaggtact tgataacttc tgcgtagcat
     2461 acatgaggtt ttgtataaaa atggcgggcg atatcaacgc agtgtcagaa atccgaaaca
     2521 gtctcgcctg gcgataaccg tcttgtcggc ggttgcgctg acgttgcgtc gtgatatcat
     2581 cagggcagac cggttacatc cccctaacaa gctgtttaaa gagaaatact atcatgacgg
     2641 acaaattgac ctcccttcgt cagtacacca ccgtagtggc cgacactggg gacatcgcgg
     2701 caatgaagct gtatcaaccg caggatgcca caaccaaccc ttctctcatt cttaacgcag
     2761 cgcagattcc ggaataccgt aagttgattg atgatgctgt cgcttgggcg aaacagcaga
     2821 gcaacgatcg cgcgcagcag atcgtggacg cgaccgacaa actggcagta aatattggtc
     2881 tggaaatcct gaaactggtt ccgggccgta tctcaactga agttgatgcg cgtctttcct
     2941 atgacaccga agcgtcaatt gcgaaagcaa aacgcctgat caaactctac aacgatgctg
     3001 gtattagcaa cgatcgtatt ctgatcaaac tggcttctac ctggcagggt atccgtgctg
     3061 cagaacagct ggaaaaagaa ggcatcaact gtaacctgac cctgctgttc tccttcgctc
     3121 aggctcgtgc ttgtgcggaa gcaggcgtgt tcctgatctc gccatttgtt ggccgtattc
     3181 ttgactggta caaagcgaat actgataaga aagagtacgc tccggcagaa gatccgggcg
     3241 tggtttctgt atctgaaatc taccagtact acaaagagca cggttatgaa acagtggtta
     3301 tgggcgcaag cttccgtaac atcggcgaaa ttctggaact ggcaggctgc gaccgtctga
     3361 ccatcgcacc ggcactgctg aaagagctgg cggagagcga aggggctatc gaacgtaaac
     3421 tgtcttacac cggcgaagtg aaagcgcgtc cggcgcgtat cactgagtcc gagttcctgt
     3481 ggcagcacaa ccaggatcca atggcagtag ataaactggc ggaaggtatc cgtaagtttg
     3541 ctattgacca ggaaaaactg gaaaaaatga tcggcgatct gctgtaatca ttcttagcgt
     3601 gaccgggaag tcggtcacgc tacctcttct gaagcctgtc tgtcactccc ttcgcagtgt
     3661 atcattctgt ttaacgagac tgtttaaacg gaaaaatctt gatgaatact ttacgtattg
     3721 gcttagtttc catctctgat cgcgcatcca gcggcgttta tcaggataaa ggcatccctg
     3781 cgctggaaga atggctgaca tcggcgctaa ccacgccgtt tgaactggaa acccgcttaa
     3841 tccccgatga gcaggcgatc atcgagcaaa cgttgtgtga gctagtggat gaaatgagtt
     3901 gccatctggt gctcaccacg ggcggaactg gcccggcgcg tcgtgacgta acgcccgatg
     3961 cgacgctggc agtagcggac cgcgagatgc ctggctttgg tgaacagatg cgccagatca
     4021 gcctgcattt tgtaccaact gcgatccttt cgcgtcaggt gggcgtgatt cgcaaacagg
     4081 cgctgatcct taacttaccc ggtcagccga agtctattaa agagacgctg gaaggtgtga
     4141 aggacgctgc gggtaacgtt gtggtacacg gtatttttgc cagcgtaccg tactgcattc
     4201 agttgctgga agggccatac gttgaaacgg caccggaagt ggttgcagca ttcagaccga
     4261 agagtgcaag acgcgacgtt agcgaataaa aaaatccccc cgagcggggg gatctcaaaa
     4321 caattagtgg gattcaccaa tcggcagaac ggtgcgacca aactgctcgt tcagtacttc
     4381 acccatcgcc agatagattg cgctggcacc gcagatcagc ccaatccagc cggcaaagtg
     4441 gatgattgcg gcgttaccgg caatgttacc gatcgccagc agggcaaaca gcacggtcag
     4501 gctaaagaaa acgaattgca gaacgcgtgc gcctttcagc gtgccgaaga acataaacag
     4561 cgtaaatacg ccccacagac ccaggtagac accaaggaac tgtgcatttg gcgcatcggt
     4621 cagacccagt ttcggcatca gcagaatcgc aaccagcgtc agccagaaag aaccgtaaga
     4681 ggtgaatgcg gttaaaccga aagtgttgcc ttttttgtac tccagcagac cagcaaaaat
     4741 ttgcgcgatg ccgccgtaga aaatgcccat ggcaagaata ataccgtcca gagcgaaata
     4801 acccacgttg tgcaggttaa gcagaatggt ggtcatgccg aagcccatca ggcccagcgg
     4861 tgccggatta gccaacttag tgttgcccat aattcctcaa aaatcatcat cgaatgaatg
     4921 gtgaaataat ttccctgaat aactgtagtg ttttcagggc gcggcataat aatcagccag
     4981 tggggcagtg tctacgatct tttgagggga aaatgaaaat tttccccggt ttccggtatc
     5041 agacctgagt ggcgctaacc atccggcgca ggcaggcgat ttgcagtacg gctggaatcg
     5101 tcacgcgata ggcgctgccg ctgaccgctt taaccccatt tagtgccgca cctacagggc
     5161 ctcccagccc cgcgccgcgc agcaaaccat gcccaagtac gctcattgct gcgtgggtgc
     5221 gtaaaatgcg ggtcagttgg ctggaaagca aatgcgacac gccttttgcc aataatttgt
     5281 ctttcatcag cagcggcagc agctcttcca gctcattcac cctggcatcg atcgcgtgca
     5341 gaaattcctg cttatgttcc tcgtccatat tcttccaggt gttacgcaga aattgttcca
     5401 gtaactgttg ctcaatctca aacgtagaca tctctttgtc ggctttcagc ttcaatcgtt
     5461 ttgaaacatc gagcaaaatg gcccgataca atttaccgtg tccgcgcagt ttgttggcga
     5521 tactatcgcc accaaaatgc tgtaattctc cagcaatcag ctgccagttg cggcgatgtt
     5581 gctcgggatg cccttccatc gatttaaaca gttcgttgcg catcagtacg ctggagaggc
     5641 gagttttgcc tttttcatta tgggtgagca atcgggcgaa atttgccaac tgttcctcac
     5701 tacaatgctg aagaaaatcc agatctgaat cattcaggta attaacattc attttttgtg
     5761 gtttctatat tctggcgtta gtcgtcgccg ataattttca gcgtggccat atccgatgag
     5821 ttcaccgtat gaccggaaaa ggtgattttt gagacgcagc gtttattgtc gttatcactg
     5881 ttaatgttga tccagtcagt ggtttgccct tcttttattt ctgaaggaat attcagactc
     5941 tgactggcgc tacgggcggc tttgaaataa accgatgcac cgcttaactg taaatcgcca
     6001 tggtcggcag agagttgtat gcgtttcaca atgcgacaaa caggaagttt cagcgccaga
     6061 tcgttggttt cgttacgcgg cattgcaatg acgccgagga gtttatggtc gtttgcctgc
     6121 gccgtgcagc acagcatcag gctaatcgcc aggctggcgg aaatcgtaaa aacggatttc
     6181 ataaggattc tcttagtggg aagaggtaga gggatgaata cccactagtt tactgctgat
     6241 aaagagaaga ttcaggtacg taatcttttc tttttattac aattttttga tgaatgcctt
     6301 ggctgcgatt cattctttat atgaataaaa ttgctgtcaa ttttacgtct tgtcctgcca
     6361 tatcgcgaaa tttctgcgca aaagcacaaa aaatttttgc atctccccct tgatgacgtg
     6421 ggttacgacc ccatttagta gtcaaccgca gtgagtgagt ctgcaaaaaa atgaaattgg
     6481 gcagttgaaa ccagacgttt cgcccctatt acagactcac aaccacatga tgaccgaata
     6541 tatagtggag acgtttagat gggtaaaata attggtatcg acctgggtac taccaactct
     6601 tgtgtagcga ttatggatgg caccactcct cgcgtgctgg agaacgccga aggcgatcgc
     6661 accacgcctt ctatcattgc ctatacccag gatggtgaaa ctctggttgg tcagccggct
     6721 aaacgtcagg cagtgacgaa cccgcaaaac accctgtttg cgattaaacg cctgattggc
     6781 cgccgcttcc aggacgaaga agtacagcgt gatgtttcca tcatgccgtt caaaattatt
     6841 gctgctgata acggcgacgc atgggtcgaa gttaaaggcc agaaaatggc accgccgcag
     6901 atctctgctg aagtgctgaa aaaaatgaag aaaaccgctg aagattactt gggtgaaccg
     6961 gtaactgaag ctgttatcac cgtaccggca tactttaacg atgctcagcg tcaggcaacc
     7021 aaagacgcag gccgtatcgc tggtctggaa gtaaaacgta tcatcaacga accgaccgca
     7081 gctgcgctgg cttacggtct ggacaaaggt actggcaacc gtactatcgc ggtttatgac
     7141 ctgggtggtg gtactttcga tatttctatt atcgaaatcg acgaagttga cggcgaaaaa
     7201 accttcgaag ttctggctac caacggtgat acccacctgg gtggtgaaga cttcgacagc
     7261 cgtctgatca actacctggt tgaagaattc aagaaagatc agggcattga cctgcgcaac
     7321 gatccgctgg caatgcagcg cctgaaagaa gcggcagaaa aagcgaaaat cgaactgtct
     7381 tccgctcagc agaccgacgt taacctgccg tacatcactg cagatgcgac cggtccgaaa
     7441 cacatgaaca tcaaagtgac tcgtgcgaaa ctggaaagcc tggttgaaga tctggtaaac
     7501 cgttccattg agccgctgaa agttgcactg caggacgctg gcctgtccgt atctgatatc
     7561 gacgacgtta tcctcgttgg tggtcagact cgtatgccaa tggttcagaa gaaagttgct
     7621 gagttctttg gtaaagagcc gcgtaaagac gttaacccgg acgaagctgt agcaatcggt
     7681 gctgctgttc agggtggtgt tctgactggt gacgtgaaag acgtactgct gctggacgtt
     7741 accccgctgt ctctgggtat cgaaaccatg ggcggtgtga tgacgacgct gatcgcgaaa
     7801 aacaccacta tcccgaccaa gcacagccag gtgttctcta ccgctgaaga caaccagtct
     7861 gcggtaacca tccatgtgct gcagggtgaa cgtaaacgtg cggctgataa caaatctctg
     7921 ggtcagttca acctggatgg tatcaacccg gcaccgcgcg gcatgccgca gatcgaagtt
     7981 accttcgata tcgatgctga cggtatcctg cacgtttccg cgaaagataa aaacagcggt
     8041 aaagagcaga agatcaccat caaggcttct tctggtctga acgaagatga aatccagaaa
     8101 atggtacgcg acgcagaagc taacgccgaa gctgaccgta agtttgaaga gctggtacag
     8161 actcgcaacc agggcgacca tctgctgcac agcacccgta agcaggttga agaagcaggc
     8221 gacaaactgc cggctgacga caaaactgct atcgagtctg cactgactgc actggaaact
     8281 gctctgaaag gtgaagacaa agccgctatc gaagcgaaaa tgcaggagct ggcacaggtt
     8341 tcccagaaac tgatggaaat cgcccagcag caacatgccc agcagcagac tgccggtgct
     8401 gatgcttctg caaacaacgc gaaagatgac gatgttgtcg acgctgaatt tgaagaagtt
     8461 aaagacaaaa aataatcgcc ctataaacgg gtaattatac tgacacgggc gaaggggaat
     8521 ttcctctccg cccgtgcatt catctagggg caatttaaaa aagatggcta agcaagatta
     8581 ttacgagatt ttaggcgttt ccaaaacagc ggaagagcgt gaaatcaaaa aggcctacaa
     8641 acgcctggcc atgaaatacc acccggaccg taaccagggt gacaaagagg ccgaggcgaa
     8701 atttaaagag atcaaggaag cttatgaagt tctgaccgac tcgcaaaaac gtgcggcata
     8761 cgatcagtat ggtcatgctg cgtttgagca aggtggtatg ggcggcggcg gttttggcgg
     8821 cggcgcagac ttcagcgata tttttggtga cgttttcggc gatatttttg gcggcggacg
     8881 tggtcgtcaa cgtgcggcgc gcggtgctga tttacgctat aacatggagc tcaccctcga
     8941 agaagctgta cgtggcgtga ccaaagagat ccgcattccg actctggaag agtgtgacgt
     9001 ttgccacggt agcggtgcaa aaccaggtac acagccgcag acctgtccga cctgtcatgg
     9061 ttctggtcag gtgcagatgc gtcagggatt cttcgctgta cagcagacct gtccacactg
     9121 tcagggccgc ggtacgctga tcaaagatcc gtgcaacaaa tgtcatggtc atggtcgtgt
     9181 tgagcgcagc aaaacgctgt ccgttaaaat cccggcaggg gtggacactg gagaccgcat
     9241 ccgtcttgcg ggcgaaggtg aagcgggcga gcatggcgca ccggcaggcg atctgtacgt
     9301 tcaggttcag gttaaacagc acccgatttt cgagcgtgaa ggcaacaacc tctattgcga
     9361 agtcccgatc aacttcgcta tggcggcgct gggtggcgaa atcgaagtac cgacccttga
     9421 tggtcgcgtc aaactgaaag tgcctggcga aacccagacc ggtaagcttt tccgtatgcg
     9481 cggtaaaggc gtcaagtctg tccgcggtgg cgcacagggt gatttgctgt gccgcgttgt
     9541 cgtcgaaaca ccggtaggcc tgaacgagaa gcagaaacag ctgctgcaag agctgcaaga
     9601 aagcttcggt ggcccaaccg gtgagcacaa cagcccgcgc tcaaagagct tctttgatgg
     9661 tgtgaagaag ttttttgacg acctgacccg ctaacctccc caaaagcctg cccgtgggca
     9721 ggcttgggta aaattagggt gcgttgaaga tatgcgagca cctgaaaagt ggcggggatc
     9781 actccccgcc gttgcactta ctcggattcg taagccgtga aaacagcaac ctccgtctgg
     9841 ccagttcgga tgtgaacctc acagaggtct tttctcgtta ccagcgccgc cactacggcg
     9901 gtgatacaga tgacgatcag ggcgacaatc atcgccttat gctgcttcat tgctctcttc
     9961 tccttgacct tacggtcagt aagaggcact ctacatgtgt tcagcatata gggggcctcg
    10021 ggttgatagt aaaatatcac tcggggcttt tctctatctg ccgttcagct aatgcctgag
    10081 acagatagcc tcaagcaccc gccgctatta tat
//
LOCUS       DAPGWB010000158        10079 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.160, whole genome shotgun sequence.
ACCESSION   DAPGWB010000158 DAPGWB010000000
VERSION     DAPGWB010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10079
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.160"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..465
                     /locus_tag="RHX79_003820"
     CDS             <1..465
                     /locus_tag="RHX79_003820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HDV2198935.1"
                     /translation="PIKGASVYGKPVASMPRKRNKNGVYLTEIGTDTAKEQIYNRFTL
                     TPEGDEPLPGAVHFPNNPDIFDLTEAQQLTAEEQVEKWVDGRKKILWDSKKRRNEALD
                     CFVYALAALRISISRWQLDLSALLASLQEEDGAATNKKTLADYARALSGEDE"
     gene            462..668
                     /locus_tag="RHX79_003821"
     CDS             462..668
                     /locus_tag="RHX79_003821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gpW family protein"
                     /protein_id="HDV2198936.1"
                     /translation="MTRQEELAAARAALHDLMTGKRVATVQKDGRRVEFTATSVSDLK
                     KYIAELEVQTGMTQRRRGPAGFYV"
     gene            665..2266
                     /locus_tag="RHX79_003822"
     CDS             665..2266
                     /locus_tag="RHX79_003822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDV2198937.1"
                     /translation="MKTPTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRAWNPPGES
                     VDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDHIVGSFFRLSHRPSWRYLGIGEE
                     EARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTS
                     PSRLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQK
                     WTWIPRELPGGRASFIHVFEPVEDGQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKA
                     MYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYAAAPVRLGGAKVPHLM
                     PGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANES
                     WAYFMGRRKFVASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGS
                     GRMAIDGLKEVQEAVMLIEAGLSTYEKECAKRGDDYQEIFAQQVRETMERRAAGLKPP
                     AWAAAAFESGLRQSTEEEKSDSRAA"
     gene            2247..3566
                     /locus_tag="RHX79_003823"
     CDS             2247..3566
                     /locus_tag="RHX79_003823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HDV2198938.1"
                     /translation="MTAELRNLPHIASMAFNEPLMLEPAYARVFFCALAGQLGISRLT
                     DAVSGDSLTAGEAPATLALSVNDDGPRQARSYQVMNGIAVLPVSGTLVSRTRALQPYS
                     GMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALA
                     NDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHK
                     VDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAVLDTEAAVYSGQEAID
                     AGLADELVNSTDAITVMRDALDTRKSRLSGGRMTKETQSTTVSATASQADVTDVVQAT
                     EGKNASAAQPDVNAQITAAVAAENSRIMGILNCEEAHGREEQARVLAETPGMTVETAR
                     RILAAAPQSAQARSDTALDRLMQGAPAPLAAGNPASDAVNDLLNTPV"
     gene            3576..3908
                     /locus_tag="RHX79_003824"
     CDS             3576..3908
                     /locus_tag="RHX79_003824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HDV2198939.1"
                     /translation="MTSKETFTHYQPLGNSDPAHTATAPGGLSAKAPAMTPLMLDTAT
                     RKLVVWDGTTDGAAVGILAVAADQTSTTLTFYKSGTFRYEDVLWPEAASDETKKRTAF
                     AGTAISIV"
     gene            3964..4989
                     /locus_tag="RHX79_003825"
     CDS             3964..4989
                     /locus_tag="RHX79_003825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HDV2198940.1"
                     /translation="MSMYTTAQLLAANEQKFKFDPLFLRLFFRESYPFTTEKVYLSQI
                     PGLVNMALYVSPIVSGEVIRSRGGSTSEFTPGYVKPKHEVNPQMTLRRLPDEDPQNLA
                     DPAYRRRRIILQNMRDEELAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSEAN
                     NITQSGGTEWSKRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKL
                     DTRRGSNSELETAVKDLGEAVSYKGMYGDTAIVVYSGQYVENDVKKNFLPDNTMVLGN
                     TQARGLRTYGCIQDADAQREGINASARYPKNWVTTGDPAREFTMIQSAPLMLLADPDA
                     FVSVQLA"
     gene            5031..5426
                     /locus_tag="RHX79_003826"
     CDS             5031..5426
                     /locus_tag="RHX79_003826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-packaging protein FI"
                     /protein_id="HDV2198941.1"
                     /translation="MTKDELIARLQVLGEQLNRDVSLMGTKEELVLRVAELEEELDDT
                     DDAAGQDTSVSPENALTGHENEVVSAQPDTVIDTAALVTVVALVTLHTDALHATRDEP
                     VAFVLPGTAFRVSAGVAAEMTEHGLARMQ"
     gene            5438..5791
                     /locus_tag="RHX79_003827"
     CDS             5438..5791
                     /locus_tag="RHX79_003827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail joining protein"
                     /protein_id="HDV2198942.1"
                     /translation="MADSDNLFDAAIARADETIRGYMGTSATMTSGELSGAVIRGVFD
                     DPENISYAGQGVRVEGSSPSLFVRTDDVRQLRRGDTLTIGEENFWVDRISPDDGGSCH
                     LWLGRGVPPAVNRRR"
     gene            5803..6381
                     /locus_tag="RHX79_003828"
     CDS             5803..6381
                     /locus_tag="RHX79_003828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2198943.1"
                     /translation="MAIKGLEQAVENLSRISKTAVPGAAAMAINRVASSAISQSASQV
                     ARETKVRRKLVKERARLKRATVKNPQARIRVNRGDLPVIKLGNARVVLSRRRRRKKGQ
                     RSSLKGGGSVLVVGNRRIPGAFIQQLKNGRWHVMQRVAGKNRYPIDVVKIPMAVPLTT
                     AFKQNIERIRRERLPKELGYALQHQLRMVIKR"
     gene            6378..6773
                     /locus_tag="RHX79_003829"
     CDS             6378..6773
                     /locus_tag="RHX79_003829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2198944.1"
                     /translation="MKHTELRAAVLDALEKHDTGATLFDGRPAVFDEADFPAIAVYLT
                     GAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDSWMESRIYPVMSDIPALSDLITSM
                     VASGYDYRRDDDAGLWSSADLTYVITYEM"
     gene            6781..7521
                     /locus_tag="RHX79_003830"
     CDS             6781..7521
                     /locus_tag="RHX79_003830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2198945.1"
                     /translation="MPVPNPVMPVKGAGTTLWVYKGNGDPYANPLSDVDWSRLAKVKD
                     LTPGELTAESYDDSYLDDEDADWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNE
                     GDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTA
                     ATGMTVTPASTSVVKGQSTTLTVAFQPEGVTDKSFRAVSADKTKATVSVSGMTITVNG
                     VAAGKVNIPVVSGNGEFAAVAEITVTAS"
     gene            7537..7959
                     /locus_tag="RHX79_003831"
     CDS             7537..7959
                     /locus_tag="RHX79_003831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
                     /protein_id="HDV2198946.1"
                     /translation="MFLKTESFEHNGVTVTLSELSALQRIEHLALMKRQAEQAESDSN
                     RKFTVEDAIRTGAFLVAMSLWHNHPQKTQMPSMNEAVKQIEQEVLTTWPTEAISHAEN
                     VVYRLSGMYEFVVNNAPEQTEDAGPAEPVSAGKCSTVS"
     gene            7941..8375
                     /locus_tag="RHX79_003832"
     CDS             7941..8375
                     /locus_tag="RHX79_003832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
                     /protein_id="HDV2198947.1"
                     /translation="MFDGELSFALKLAREMGRPDWRAMLAGMSSTEYADWHRFYSTHY
                     FHDVLLDMHFSGLTYTVLSLFFSDPDMHPLDFSLLNRREADEEPEDDVLMQKAAGLAG
                     GVRFGPDGNEVIPASPDVADMTEDDVMLMTVSEGIAGGVRYG"
     gene            8368..>10079
                     /locus_tag="RHX79_003833"
     CDS             8368..>10079
                     /locus_tag="RHX79_003833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDV2198948.1"
                     /translation="MAEPVGDLVVDLSLDAARFDEQMARVRRHFSGTESDAKKTAAVV
                     EQSLSRQALAAQKAGISVGQYKAAMRMLPAQFTDVATQLAGGQSPWLILLQQGGQVKD
                     SFGGMIPMFRGLAGAITLPMVGATSLAVATGALAYAWYQGNSTLSDFNKTLVLSGNQS
                     GLTADRMLVLSRAGQAAGLTFNQTSESLSALVKAGVSGEAQIASISQSVARFSSASGV
                     EVDKVAEAFGKLTTDPTSGLTAMARQFHNVTAEQIAYVAQLQRSGDEAGALQAANEAA
                     TKGFDDQTRRLKENMGTLETWADRTARAFKSMWDAVLDIGRPDTAQEMLIKAEAAFKK
                     ADDIWNLRKDDYFVNDEARARYWDDREKARLALEAARKKAEQQTQQDKNAQQQSDTEA
                     SRLKYTEEAQKAYERLQTPLEKYTARQEELNKALKDGKILQADYNTLMAAAKKDYEAT
                     LKKPKQSGVKVSAGDRQEDSAHAALLTLQAELRTLEKHAGANEKISQQRRDLWKAESQ
                     FAVLEEAAQRRQLSAQEKSLLAHKDETLEYKRQLAALGDKVTYQERLNALAQQADKFA
                     QQQRA"
BASE COUNT         2282 a         2632 c         3182 g         1983 t
ORIGIN      
        1 cccattaaag gggcatccgt ctacggaaag ccggtggcca gcatgccacg taagcgaaac
       61 aaaaacgggg tttaccttac cgaaatcggt acggataccg cgaaagagca gatttataac
      121 cgcttcacac tgacgccgga aggggatgaa ccgcttcccg gtgccgttca cttcccgaat
      181 aacccggata tttttgatct gaccgaagcg cagcagctga ctgctgaaga gcaggtcgaa
      241 aaatgggtgg atggcaggaa aaaaatactg tgggacagca aaaagcgacg caatgaggcg
      301 ctcgactgct tcgtttatgc gctggcggcg ctgcgcatca gtatttcccg ctggcagctg
      361 gatctcagtg cactgctggc gagcctgcag gaagaggatg gtgcagcaac caacaagaaa
      421 acactggcag attacgcccg tgccttatcc ggagaggatg aatgacgcga caggaagaac
      481 ttgccgctgc ccgtgcggca ctgcatgacc tgatgacagg taaacgggtg gcaacggtac
      541 agaaagacgg acggcgagtg gagtttacgg ccacttccgt gtctgacctg aaaaaataca
      601 ttgcggagct tgaggtgcag accggcatga cacagcgacg caggggacct gcaggatttt
      661 atgtatgaaa acgcccacca ttcccaccct tctgggaccg gacggcatga catcgctgcg
      721 tgaatatgcc ggttatcacg gcggtggcag cggatttggt gggcagttgc gggcgtggaa
      781 cccaccgggt gaaagtgtgg atgcagccct gctgcccaac tttacccgtg gcaatgcccg
      841 cgcggacgat ctggtacgca ataacggcta tgctgccaac gccatccagc tgcatcagga
      901 tcatatcgtc gggtcttttt tccggctcag tcatcgccca agctggcgct atctgggcat
      961 cggggaggaa gaagcccgtg ccttttcccg cgaggttgaa gcggcatgga aagagtttgc
     1021 cgaggacgac tgttgctgca ttgacgttga gcgaaaacgc acgttcacca tgatgattcg
     1081 ggaaggtgtg gccatgcatg cctttaacgg tgaactgttc gttcaggcca cctgggatac
     1141 cagcccgtcg cgactgttcc ggacacagtt ccggatggtc agcccgaagc gcatcagcaa
     1201 cccgaacaat accggcgaca gccggaactg ccgtgccggt gtgcagatta atgacagcgg
     1261 tgcggcgctg ggatattacg tcagcgagga cgggtatcct ggctggatgc cgcagaaatg
     1321 gacatggata ccccgtgagt tacccggcgg gcgcgcctcg ttcattcacg tttttgaacc
     1381 cgtggaggac gggcagaccc gcggtgcaaa tgtgttttac agcgtgatgg agcagatgaa
     1441 gatgctcgac acgctgcaga acacgcagct gcagagcgcc attgtgaagg cgatgtatgc
     1501 cgccaccatt gaaagtgagc tggatacgca gtcagcgatg gattttattc tgggcgcgaa
     1561 cagtcaggag cagcgggaaa ggctgacggg ctggattggt gaaattgccg cgtattacgc
     1621 cgcagcaccg gtccgtctgg gaggcgcaaa agtgccgcac ctgatgccgg gggactcact
     1681 gaacctgcag acggctcagg acacggataa cggctactcc gtgtttgagc agtcactgtt
     1741 gcggtatatc gctgccgggc tgggtgtctc gtatgagcag ctttcccgga attacgccca
     1801 gatgagctac tccacggcac gggccagtgc gaacgagtcg tgggcgtact ttatggggcg
     1861 gcgaaaattc gtcgcatccc gtcaggcgag ccagatgttt ctgtgctggc ttgaagaggc
     1921 catcgttcgc cgcgtggtga cgttaccttc aaaagcgcgc ttcagctttc aggaagcccg
     1981 cagtgcctgg gggaactgcg actggatagg ctccggtcgt atggccatcg atggtctgaa
     2041 agaagttcag gaagcggtga tgctgataga agccggactg agcacctacg agaaagagtg
     2101 cgcgaaacgc ggtgacgact atcaggaaat ttttgcccag caggtccgtg aaacgatgga
     2161 gcgccgcgca gctggtctta aaccacccgc ctgggcggct gcggcatttg aatccgggct
     2221 gcgacaatca acagaggagg agaagagtga cagcagagct gcgtaatctc ccgcatattg
     2281 ccagcatggc ctttaatgag ccgctgatgc ttgaacccgc ctatgcgcgg gttttctttt
     2341 gtgcgcttgc aggccagctt gggatcagcc gcctgacgga tgcggtgtcc ggtgacagcc
     2401 tgactgccgg agaggcaccc gcgacgctgg cgttatccgt taatgatgac ggaccacgac
     2461 aggcccgcag ttatcaggtc atgaacggca tcgccgtgct gccggtgtcc ggcacgctgg
     2521 tcagccggac gcgggcgctg cagccgtatt cggggatgac cggttacaac ggcattatcg
     2581 cccgtctgca acaggctgcc agtgacccga tggtggacgg cattctgctg gatatggaca
     2641 cgcccggcgg aatggtggca ggggcatttg actgcgctga catcatcgcc cgtgtgcgtg
     2701 acataaagcc ggtatgggcg ctggccaatg acatgaactg cagcgcaggt cagctgcttg
     2761 ccagtgccgc ctcccggcgt ctggtcacgc agaccgcccg gacaggctcc atcggcgtca
     2821 tgatggctca cagtaattac ggtgctgcgc tggagaaaca gggcgtggaa atcacgctga
     2881 tttacagcgg cagccataag gtggatggca acccctacag ccatcttccg gatgacgtcc
     2941 gggagacact gcagtcccgg atggatgcaa cccgccggat gtttgcacag aaggtgtcgg
     3001 catataccgg cctgtccgtg caggctgtgc tggataccga ggctgcagtg tacagcggtc
     3061 aggaggccat tgatgccgga ctggctgatg aacttgtcaa cagcaccgat gcgatcaccg
     3121 tcatgcgtga tgcactggat acacgtaaat cccgtctctc aggagggcga atgaccaaag
     3181 agactcaatc aacaactgtt tcagccactg cttcgcaggc tgacgttact gacgtggtgc
     3241 aagcgacgga gggcaaaaat gccagcgcgg cgcagccgga tgtgaacgcg cagatcaccg
     3301 cagcggttgc ggcagaaaac agccgcatta tggggatcct caactgtgag gaggctcacg
     3361 gacgcgaaga acaggcacgc gtgctggccg aaacccccgg tatgaccgtg gaaacggccc
     3421 gccgcattct ggcagctgca ccacagagtg cacaggcgcg cagtgacact gcgctggatc
     3481 gtctgatgca gggggcaccg gcaccgctgg ctgcaggtaa cccggcatct gatgccgtta
     3541 acgatttgct gaacacacca gtgtaaggga tgtttatgac gagcaaagaa acctttaccc
     3601 attaccagcc gctgggcaac agtgacccgg cacatacggc aaccgcgccc ggcggattga
     3661 gtgcgaaagc gcctgcaatg accccgctga tgctggacac cgccacccgt aagctggttg
     3721 tgtgggatgg caccaccgac ggtgctgccg ttggcattct ggcggttgct gctgaccaga
     3781 ccagcaccac gctgacgttc tacaagtccg gcacgttccg ttatgaggat gtgctctggc
     3841 cggaggctgc cagcgacgag acgaaaaaac ggaccgcgtt tgccggaacg gcaatcagca
     3901 tcgtttaacc ttacccttca tcactaaagg ccgcctgtgc ggcttttttt acgggatttt
     3961 tttatgtcga tgtacacaac cgcccagctg ctggcggcaa atgagcagaa atttaagttt
     4021 gatccgctgt ttctgcgtct ctttttccgt gagagctatc ccttcaccac ggagaaagtc
     4081 tatctctcac aaattccggg actggtaaac atggcgctgt acgtttcgcc gattgtttcc
     4141 ggtgaggtta tccgctcccg tggcggctcc acctctgaat ttacaccggg atatgtcaag
     4201 cccaagcatg aggtgaatcc gcagatgacc ctgcgtcgcc tgccggatga agatccacag
     4261 aatctggcgg acccggctta ccgccgccgt cgcatcattc tgcagaacat gcgagacgaa
     4321 gagctggcca ttgctcaggt cgaagagatg caggcagttt ctgccgtgct taagggcaaa
     4381 tacaccatga ccggtgaagc cttcgatccg gttgaagtgg atatggggcg cagtgaggca
     4441 aataacatca cgcagtccgg cggtacggag tggagcaagc gtgacaagtc cacgtatgac
     4501 ccgaccgacg atatcgaagc ctacgcgctg aacgccagcg gtgtggtgaa tatcatcgtg
     4561 tttgatccga aaggctgggc gctgttccgt tccttcaaag ccgtcaagga gaagctggat
     4621 acccgtcgcg gctctaattc cgagctggag acagcggtaa aagacctggg cgaagcggtg
     4681 tcctataagg ggatgtatgg cgatacggcg atcgtcgtgt attccggaca gtacgtggaa
     4741 aacgacgtca aaaagaactt cctgccggac aacacgatgg tgctggggaa cactcaggca
     4801 cgcggtctgc gcacctatgg ctgcattcag gatgcggacg cacagcgcga aggtattaac
     4861 gcctctgccc gctacccgaa aaactgggtg accaccggcg atccggcgcg tgagttcacc
     4921 atgattcagt cagcaccgct gatgctgctg gctgaccctg atgcgttcgt gtccgtacaa
     4981 ctggcgtaat catggccctt cggggccatt ttctctctgt ggaggagtcc atgacgaaag
     5041 atgaactgat tgcccgtctt caggtgctgg gtgagcaact gaaccgtgat gtcagcctga
     5101 tggggacgaa agaagaactg gtgctccgtg tggcagagct ggaagaggag cttgatgaca
     5161 cggatgacgc tgccggtcag gacacatctg tcagcccgga aaatgcgctg accggacatg
     5221 aaaatgaggt ggtatcagcg cagccggata ccgtgattga tacggctgct ctggtcacgg
     5281 tcgtggcact ggtgacgctg catactgatg cacttcacgc cacgcgggat gagcctgtgg
     5341 catttgtgct gccgggaacg gcgtttcgtg tctctgccgg tgtggcagcc gaaatgacag
     5401 aacatggcct ggccagaatg caataacggg aggcgctgtg gctgattccg ataacctgtt
     5461 cgatgctgcc attgcccgcg ccgatgaaac gatacgcggg tacatgggaa cgtcagccac
     5521 catgacatcc ggtgagctgt ccggtgctgt gatacgtggt gtttttgatg accctgaaaa
     5581 tatcagctat gccggacagg gggtgcgcgt tgaaggctcc agcccgtccc tgtttgtccg
     5641 gactgatgat gtgcggcagc tgcggcgtgg agacacactg accatcggcg aggaaaactt
     5701 ctgggtggac cggatttcgc cggatgatgg cggaagctgt catctctggc ttgggcgtgg
     5761 cgtgccgcct gccgttaacc gtcgccgctg aaagggggat gtatggccat aaaaggtctt
     5821 gagcaggccg ttgaaaacct cagccgtatc agcaaaacgg cggtgcctgg tgccgccgca
     5881 atggccatta accgcgttgc gtcatccgcg atatcgcagt ctgcgtcaca ggttgcccgt
     5941 gagacaaagg tacgccggaa actggtaaag gaaagggcca ggctgaaaag ggccacggtc
     6001 aaaaatccgc aggccagaat cagggttaac cggggggatt tgcccgtaat caagctgggt
     6061 aatgcgcggg ttgtcctttc gcgccgcagg cgtcgtaaaa aggggcagcg ttcatccctg
     6121 aaaggtggcg gcagcgtgct tgtggtgggt aaccgtcgta ttcccggcgc gtttattcag
     6181 caactgaaaa acggccggtg gcatgttatg cagcgtgtgg ccgggaaaaa ccgttacccc
     6241 attgatgtgg tgaaaatccc gatggcggtg ccgctgacca cggcgtttaa acagaatatt
     6301 gaacggatac ggcgtgaacg tcttccgaaa gagctgggct atgcgctgca gcatcaactg
     6361 agaatggtaa taaagcgatg aaacatactg aactccgtgc agccgtactg gatgcactgg
     6421 agaagcatga caccggggcg acgctttttg atggtcgccc cgctgttttt gatgaggcgg
     6481 attttccggc aattgccgtt tatctcaccg gcgctgaata cacgggcgaa gagctggaca
     6541 gcgatacctg gcaggcggag ctgcatattg aagttttcct gcctgctcag gtgccggatt
     6601 cagagctgga ttcgtggatg gagtcccgga tttatccggt gatgagcgat atcccggcac
     6661 tgtcagattt gatcaccagt atggtggcca gcggctatga ctaccggcgc gacgatgatg
     6721 cgggcctgtg gagttcagcc gatctgactt atgtcattac ctatgaaatg tgaggacgct
     6781 atgcctgtac caaatccagt aatgccggtg aaaggggccg ggaccacact gtgggtttat
     6841 aaggggaacg gtgaccctta tgcgaacccg ctttcagacg ttgactggtc gcgtctggct
     6901 aaagttaaag acctgacgcc cggcgaactg accgctgagt cctatgacga cagctatctc
     6961 gatgatgaag atgcggactg gactgcgacc gggcaggggc agaaatctgc cggagatacc
     7021 agcttcacgc tggcgtggat gcccggagag caggggcagc aggcgctgct ggcgtggttt
     7081 aatgaaggcg atacccgtgc ctataaaatc cgcttcccga acggcacggt cgatgtgttc
     7141 cgcggctggg tcagcagtat cggtaaggcg gtgacggcga aggaagtgat cacccgcacg
     7201 gtgaaagtca ccaatgtggg acgtccgtcg atggcagaag atcgcagcac ggtaacagcg
     7261 gcaaccggca tgaccgtgac gcctgccagc acctcggtgg tgaaagggca gagcaccacg
     7321 ctgaccgtgg ccttccagcc ggagggcgta accgacaaga gctttcgtgc ggtgtctgcg
     7381 gataaaacaa aagccaccgt gtcggtcagt ggtatgacca tcaccgtgaa cggcgttgct
     7441 gcaggcaagg tcaacattcc ggttgtatcc ggtaatggtg agtttgctgc ggttgcagaa
     7501 attaccgtca ccgccagtta atccggagag tcagcgatgt tcctgaaaac cgaatcattt
     7561 gaacataacg gtgtgaccgt cacgctttct gaactgtcag ccctgcagcg cattgagcat
     7621 ctcgccctga tgaaacggca ggcagaacag gcggagtcag acagcaaccg gaagtttact
     7681 gtggaagacg ccatcagaac cggcgcgttt ctggtggcga tgtccctgtg gcataaccat
     7741 ccgcagaaga cgcagatgcc gtccatgaat gaagccgtta aacagattga gcaggaagtg
     7801 cttaccacct ggcccacgga ggcaatttct catgctgaaa acgtggtgta ccggctgtct
     7861 ggtatgtatg agtttgtggt gaataatgcc cctgaacaga cagaggacgc cgggcccgca
     7921 gagcctgttt ctgcgggaaa gtgttcgacg gtgagctgag ttttgccctg aaactggcgc
     7981 gtgagatggg gcgacccgac tggcgtgcca tgcttgccgg gatgtcatcc acggagtatg
     8041 ccgactggca ccgcttttac agtacccatt attttcatga tgttctgctg gatatgcact
     8101 tttccgggct gacgtacacc gtgctcagcc tgtttttcag cgatccggat atgcatccgc
     8161 tggatttcag tctgctgaac cggcgcgagg ctgacgaaga gcctgaagat gatgtgctga
     8221 tgcagaaagc ggcagggctt gccggaggtg tccgctttgg cccggacggg aatgaagtta
     8281 tccccgcttc cccggatgtg gcggacatga cggaggatga cgtaatgctg atgacagtat
     8341 cagaagggat cgcaggagga gtccggtatg gctgaaccgg taggcgatct ggtcgttgat
     8401 ttaagtctgg atgcggccag atttgacgag cagatggcca gagtcaggcg tcatttttcc
     8461 ggtacggaaa gtgatgcgaa aaaaacagcg gcagtcgttg aacagtcgct gagccggcag
     8521 gcgctggctg cacagaaagc ggggatttcc gtcgggcagt ataaagccgc catgcgtatg
     8581 cttcctgcac agttcaccga cgtggccacg cagcttgcag gcgggcaaag tccgtggctg
     8641 atcctgctgc aacagggtgg tcaggttaag gactccttcg gcgggatgat ccccatgttc
     8701 agggggcttg ccggtgcaat caccctgccg atggtcgggg ccacctcgct ggcggtggcg
     8761 accggtgcgc tggcgtatgc ctggtatcag ggcaactcaa ccctgtccga tttcaacaaa
     8821 acgctggtcc tttccggcaa tcagtcgggg ctgacggcag atcgtatgct ggtcctgtcc
     8881 agagccgggc aggcggcagg gctgacgttt aaccagacca gcgagtcact cagcgcactg
     8941 gttaaggcgg gggtaagcgg tgaggctcag attgcgtcca tcagccagag tgtggcgcgt
     9001 ttctcctctg catccggcgt ggaggtggac aaggtcgctg aagccttcgg gaagctgacc
     9061 acagacccga cgtcagggct gacagcgatg gcacgccagt tccataacgt gacggcggag
     9121 cagattgcgt atgttgctca gttgcagcgt tccggcgatg aagccggggc attgcaggcg
     9181 gcgaacgagg ccgcaacgaa agggtttgat gaccagaccc gccgcctgaa agagaacatg
     9241 ggcacgctgg agacctgggc agacaggaca gcgcgggcct tcaaatccat gtgggatgcg
     9301 gtgctggata ttggtcgtcc tgataccgcg caggagatgc tgattaaggc agaggctgcg
     9361 tttaagaaag cagacgacat ctggaatctg cgcaaggatg attattttgt taacgatgaa
     9421 gcgcgggcgc gttactggga tgatcgtgaa aaggcccgtc ttgcgcttga agccgcccga
     9481 aagaaggctg agcagcagac tcaacaggac aaaaatgcgc agcagcagag cgataccgaa
     9541 gcgtcacggc tgaaatatac cgaagaggcg cagaaggctt acgaacggct gcagacgccg
     9601 ctggagaaat ataccgcccg tcaggaagaa ctgaacaagg cactgaaaga cgggaaaatc
     9661 ctgcaggcag attacaacac gctgatggcg gcggcgaaaa aggattatga agcgacgctg
     9721 aaaaagccga aacagtccgg cgtgaaggtg tctgcgggcg atcgtcagga agacagtgct
     9781 catgctgccc tgctgacgct tcaggcagaa ctccggacgc tggagaagca tgccggagcg
     9841 aatgagaaaa tcagccagca gcgccgggat ttgtggaagg cagaaagtca gttcgcggta
     9901 ctggaggagg cggcacaacg tcgccagctg tccgcacagg agaaatccct gctggcgcat
     9961 aaagatgaga cgctggagta caaacgccag ctggctgcac ttggcgacaa ggttacgtat
    10021 caggagcgcc tgaacgcgct ggcgcagcag gcggataaat tcgcacagca gcaacgggc
//
LOCUS       DAPGWB010000159        10041 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.161, whole genome shotgun sequence.
ACCESSION   DAPGWB010000159 DAPGWB010000000
VERSION     DAPGWB010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10041)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10041)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10041
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.161"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            299..1276
                     /gene="csiD"
                     /locus_tag="RHX79_003834"
     CDS             299..1276
                     /gene="csiD"
                     /locus_tag="RHX79_003834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation induced protein CsiD"
                     /protein_id="HDV2198949.1"
                     /translation="MNALTAVHNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQ
                     FLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQPLLLKTLLNRAEGALLINAVGI
                     DDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
                     NDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPP
                     SKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVP
                     VPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ"
     gene            1296..2564
                     /gene="lhgO"
                     /locus_tag="RHX79_003835"
     CDS             1296..2564
                     /gene="lhgO"
                     /locus_tag="RHX79_003835"
                     /EC_number="1.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311548.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2-hydroxyglutarate oxidase"
                     /protein_id="HDV2198950.1"
                     /translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTG
                     HNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNDIRYDNCGKMLVATSDLEMERM
                     RALWERTAANGIEREWLNAEELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQA
                     RGGEIIYNAEVSGLSEHKSGVVIRTRQGGDYEASTLISCSGLMADRLVKMLGLEPGFI
                     ICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKR
                     EGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLS
                     LSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSK
                     VQTLLASQSNPGRTLRAARSVDALHAAFNQ"
     gene            2587..4035
                     /gene="gabD"
                     /locus_tag="RHX79_003836"
     CDS             2587..4035
                     /gene="gabD"
                     /locus_tag="RHX79_003836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDV2198951.1"
                     /translation="MKLNASNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPK
                     MGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPL
                     AEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA
                     AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGN
                     ELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEG
                     ALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDKGVTIGPLIDE
                     KAVAKVEEHIADALEKGARVVCGGKADERGGNFFQPTILMDVPANAKVSKEETFGPLA
                     PLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA
                     PFGGIKASGLGREGSKYGIEDYLEIKYMCIGL"
     gene            4049..5329
                     /gene="gabT"
                     /locus_tag="RHX79_003837"
     CDS             4049..5329
                     /gene="gabT"
                     /locus_tag="RHX79_003837"
                     /EC_number="2.6.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HDV2198952.1"
                     /translation="MNSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYL
                     DFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFA
                     KKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMG
                     LMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYAAS
                     PAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPL
                     AGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDG
                     LLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPDAKLTAEIVARARDKGLILLSCGP
                     YYNVLRILVPLTIEDAQIRQGLEIISQCFAEAKQ"
     gene            5640..7040
                     /gene="gabP"
                     /locus_tag="RHX79_003838"
     CDS             5640..7040
                     /gene="gabP"
                     /locus_tag="RHX79_003838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GABA permease"
                     /protein_id="HDV2198953.1"
                     /translation="MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAG
                     PAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFW
                     VLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV
                     IAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAE
                     IVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSV
                     LELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPALMGKINRSKTP
                     YVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE
                     GSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQLEVISTGLLAIGIICTVPIMAR
                     WKKLVLWQKTPVHNTR"
     gene            7061..7723
                     /gene="csiR"
                     /locus_tag="RHX79_003839"
     CDS             7061..7723
                     /gene="csiR"
                     /locus_tag="RHX79_003839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CsiR"
                     /protein_id="HDV2198954.1"
                     /translation="MTITSLDGYRWLKNDIILGNFQPDEKLRMSLLTSRYALGVGPLR
                     EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEA
                     DVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAAR
                     YRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMA
                     GN"
     gene            complement(7724..8173)
                     /gene="kbp"
                     /locus_tag="RHX79_003840"
     CDS             complement(7724..8173)
                     /gene="kbp"
                     /locus_tag="RHX79_003840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium binding protein Kbp"
                     /protein_id="HDV2198955.1"
                     /translation="MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLSKTGIPDAD
                     KVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVK
                     SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE"
     gene            complement(8257..8415)
                     /locus_tag="RHX79_003841"
     CDS             complement(8257..8415)
                     /locus_tag="RHX79_003841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HDV2198956.1"
                     /translation="MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIH
                     AFWVQTRD"
     gene            8598..8897
                     /locus_tag="RHX79_003842"
     CDS             8598..8897
                     /locus_tag="RHX79_003842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2198957.1"
                     /translation="MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGEL
                     TRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP"
     gene            8907..9431
                     /gene="ygaP"
                     /locus_tag="RHX79_003843"
     CDS             8907..9431
                     /gene="ygaP"
                     /locus_tag="RHX79_003843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase YgaP"
                     /protein_id="HDV2198958.1"
                     /translation="MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLS
                     VLEQSGLPPKLRREQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKRAGLP
                     VAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLIAGISGFCG
                     MARLLDKMPWNQRA"
     gene            complement(9478..9882)
                     /gene="stpA"
                     /locus_tag="RHX79_003844"
     CDS             complement(9478..9882)
                     /gene="stpA"
                     /locus_tag="RHX79_003844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein StpA"
                     /protein_id="HDV2198959.1"
                     /translation="MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE
                     EQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDV
                     NGETKTWTGQGRTPKPIAQALAEGKSLDDFLI"
BASE COUNT         2311 a         2574 c         2729 g         2427 t
ORIGIN      
        1 aatatgttta gtttactaac ggtcattttg cagtgaagcc atttactgtt ttttatcgac
       61 cagataatct gttctctaat gttaactccc cctaacctgt tgctttagtt attcatttcc
      121 tgtctcactt tgccttaata ccctacgtta aatgttacta atttgttgct tttgatcaca
      181 ataagaaaac aatatgtcgc ttttgtgcgc atttttcaga aatgtagata tttttagatt
      241 atggctacga aatgagcatc gccatgtcac cctacatctc ataagaggat cgcttctgat
      301 gaatgcactg accgccgtac acaataacgc tgtcgattca ggccaggact atagcggatt
      361 cactctcatc ccgtcggcgc aatccccgcg tctgctggaa ctcaccttca ccgaacagac
      421 gaccaaacag tttctcgaac aggttgccga atggcccgtg caggcgctgg agtacaaatc
      481 gtttctgcgt tttcgggtag gcaaaattct tgacgatctg tgtgcgaatc agctgcaacc
      541 attgctgttg aagaccctgc taaaccgtgc tgaaggtgcg ctgttgatca atgcggtggg
      601 tatcgatgat gtggcgcagg cagatgagat ggtgaagctg gcaacggcgg tagcgcatct
      661 gattggtcgc tcaaatttcg atgcgatgag cggtcagtat tacgcgcgtt tcgtggtgaa
      721 aaatgtcgat aactcagaca gctatctgcg tcagccgcac cgcgtgatgg aactgcacaa
      781 cgacggcacg tatgtcgaag agatcaccga ttacgtgctg atgatgaaaa tcgatgagca
      841 aaacatgcag ggtggaaatt cgttgctgct gcatctcgat gactgggaac atctggacca
      901 ctatttccgc catccactgg cgcgtcgccc gatgcgcttt gccgcgccgc cgagcaaaaa
      961 cgtcagcaaa gatgttttcc atccagtgtt cgacgttgat caacagggtc gcccggtgat
     1021 gcgctatatc gaccagttcg tccagccaaa agattttgaa gaaggcgtgt ggttgagcga
     1081 gctttccgat gccattgaaa ccagcaaagg cattctttct gtacccgttc ccgttggcaa
     1141 attcctgttg ataaacaacc tgttctggct gcacggtcgc gaccgcttta ctccgcaccc
     1201 ggatctgcgc cgtgaactga tgcgtcagcg tggctatttc gcttacgcca ctcaccacta
     1261 ccagacgcat cagtaagcgc aaaggaattg agcggatgta tgattttgtg attattggcg
     1321 gcggcatcat cggcatgtcg accgccatgc aactgattga tgtttatccg gatgcccgca
     1381 ttgcgttgct ggaaaaagag tccggcccgg cctgtcacca gacgggccac aacagcggcg
     1441 tgatccatgc cggggtctat tacacgcccg gcagcctgaa ggcgcagttt tgcctggcgg
     1501 gaaaccgcgc caccaaagcc ttttgcgatc aaaacgacat tcgctatgac aactgcggca
     1561 agatgctggt cgccacgtcc gatctcgaaa tggaacggat gcgcgcgttg tgggaacgca
     1621 cggcggcgaa cggtatcgag cgcgagtggt taaacgccga ggaactgcgc gagcgcgaac
     1681 cgaatatcac cgggctcggc ggcatttttg tgccgtccag cggcattgtc agctaccgcg
     1741 aagtaacggc ggcgatggca aaaattttcc aggccagagg cggcgagatt atctataacg
     1801 ccgaagtcag cggccttagt gagcataaaa gcggcgtggt gatacgtacc cgtcagggcg
     1861 gcgactatga agcatcgacg ctgattagct gttccgggct gatggctgac cggctggtga
     1921 aaatgctcgg cctcgaaccg ggctttatca tctgcccgtt ccgcggcgag tatttccgcc
     1981 tggcgccgga gcataaccag attgttaacc atctgattta ccccattccc gacccggcaa
     2041 tgccgttttt gggcgtgcat ctcacccgaa tgatcgatgg cagcgtcacc gtcgggccaa
     2101 acgcggtgct ggctttcaaa cgcgaaggct atcgcaagcg cgacttctca tttagcgaca
     2161 cgctggagat tttgggctcg tcggggattc gccgggtgct gcaaaaccat ctacgctcag
     2221 gactgggcga gatgaaaaac tcgctgtgca aaagcggcta tctgcgcctg gtgcaaaagt
     2281 attgtccccg gctttcgtta agcgatctcc agccctggcc cgccggtgtg cgggcgcagg
     2341 cagtatcgcc ggacggcaag ctgattgacg attttctgtt tgtcaccacc ccacgcacga
     2401 tccacacctg caatgcgccc tccccggcag cgacatcagc aattcctatt ggtgcgcata
     2461 ttgtcagcaa ggtacaaacg ctgttggcaa gccagagtaa ccccggacgc acgctgcgtg
     2521 cggcacgtag tgtggatgcc ttacacgccg catttaatca ataacctttg aaaacaggac
     2581 gtaacaatga aacttaacgc cagtaactta ttccgccagc aggcattgat taacggggaa
     2641 tggctggacg ccaacaatgg cgaggtcatc gacgtcacca atccggcgaa cggcgacaag
     2701 ctgggtagcg tacccaaaat gggcgctgat gaaacccgcg cggctatcga cgccgccaac
     2761 cgcgccctgc ccgcctggcg cgcgctcacc gccaaagaac gcgccaccat tctgcgcaac
     2821 tggttcaatt tgatgatgga gcatcaggac gatttagcgc gcctgatgac cctcgaacag
     2881 ggtaaaccgc tggctgaagc gaaaggcgaa atcagctacg ccgcctcctt tattgagtgg
     2941 tttgctgaag aaggcaaacg tatttatggc gacaccattc ccggtcatca ggccgataaa
     3001 cgcctgattg ttatcaagca gccgattggc gtcactgctg ctatcacgcc gtggaacttt
     3061 ccggcggcga tgattacccg taaagccggt ccggcgctgg cggcaggttg caccatggtg
     3121 ctgaagcccg ccagtcagac gccgttctct gcgctggcgc tggcagagct ggcgatccgc
     3181 gcgggcattc cggctggcgt gtttaacgtg gtcaccggtt cggcgggcgc ggtgggtaat
     3241 gaactgacca gcaacccgct ggtacgcaaa ctgtcgttta ccggctcgac cgaaattggc
     3301 cgccagttaa tggaacagtg cgcgaaagac atcaaaaaag tgtcgctgga gctgggcggc
     3361 aacgcgccgt ttatcgtctt tgacgatgcc gatctcgata aagccgtgga aggcgcgctg
     3421 gcctcgaaat tccgcaacgc cgggcaaacc tgcgtctgcg ccaaccgttt atacgtgcag
     3481 gacggcgtgt atgaccgctt tgccgaaaaa ttgcagcagg cggtgagcaa actgcacatc
     3541 ggcgacgggc tggataaagg cgtcaccatc gggccgctga tcgatgaaaa agcggtagca
     3601 aaagtggaag agcatattgc cgatgcgctg gagaaaggtg cgcgtgtggt ttgcggcggt
     3661 aaagcggatg aacgcggcgg caacttcttc cagccgacca ttctgatgga cgtgccggcc
     3721 aacgccaaag tgtcgaaaga agagacgttc ggccccctcg ccccgctgtt ccgctttaaa
     3781 gatgaagccg atgtgattgc gcaagccaat gacaccgagt ttggccttgc cgcctatttc
     3841 tacgcccgtg atttaagccg cgtcttccgc gtgggcgaag cgctggagta cggcatcgtc
     3901 ggcatcaata ccggcattat ttccaatgaa gtggccccgt tcggcggcat caaagcctcg
     3961 ggtctgggtc gtgaaggttc gaagtatggc atcgaagatt acttagaaat caaatatatg
     4021 tgcatcggtc tttaactgga gaatgcgaat gaacagcaat aaagagttaa tgcagcgccg
     4081 cagtcaggcg attccccgtg gcgttgggca aattcacccg attttcgctg accgcgcgga
     4141 aaactgccgg gtgtgggacg ttgaaggccg tgagtatctt gatttcgcgg gcgggattgc
     4201 ggtgctcaat accgggcacc tgcatccgaa ggtggtggcc gcggtggaag cgcagttgaa
     4261 aaaactgtcg cacacctgct tccaggtgct ggcttacgag ccgtatctgg agctgtgcga
     4321 gattatgaat cagaaggtgc cgggcgattt cgccaagaaa acgctgctgg ttacgaccgg
     4381 ttccgaagcg gtggaaaacg cggtaaaaat cgcccgcgcc gccaccaaac gtagcggcac
     4441 catcgctttt agcggcgcgt atcacgggcg cacgcattac acgctggcgc tgaccggcaa
     4501 ggtgaatccg tactctgcgg gcatggggct gatgccgggt catgtttatc gcgcgcttta
     4561 tccttgcccg ctgcacggca taagcgagga tgacgctatc gccagcatcc accggatctt
     4621 caaaaatgat gccgcgccgg aagatatcgc cgccatcgtg attgagccgg ttcagggcga
     4681 aggcggtttc tacgccgcgt cgccagcctt tatgcagcgt ttacgcgcgc tgtgtgacga
     4741 gcacgggatc atgctgattg ccgatgaagt gcagagcggc gcagggcgta ccggcacgct
     4801 gtttgcgatg gagcagatgg gcgttgcgcc ggatctcact acctttgcga aatcgatcgc
     4861 gggcggcttc ccgctggcgg gcgtcaccgg gcgcgcggaa gtgatggatg ccgtcgctcc
     4921 aggcggtctg ggcggcacct atgccggtaa cccgattgcc tgcgtggcgg cgctggaagt
     4981 gttgaaggtg tttgagcagg aaaatctgct gcaaaaagcc aacgatctgg ggcagaagct
     5041 aaaagacgga ttgttggcga tagccgaaaa acacccggag atcggcgacg tacgcgggct
     5101 gggagcgatg attgccatcg agctgtttga agatggcgat cacagcaaac cggacgcaaa
     5161 actcaccgcc gagatcgtgg cacgcgcccg cgataagggc ctgattcttc tctcctgcgg
     5221 cccgtattac aacgtgctgc gcatccttgt accgctcacc attgaagacg ctcagatccg
     5281 tcagggtctg gagatcatca gccagtgttt tgctgaggcg aagcagtagc tatgtccgtt
     5341 tgtaagagtt aaacgttgct aagggaatga taacgatgca gtaaaaaata ataacgatga
     5401 ggcgatcgac aaagttaaaa acgactgcgg actgtcccct cgctcctctg gggagagggt
     5461 tagggtgagg ggtaatcacg cggctacacc ctcaccccgg ccctctccct aagggagagg
     5521 gagaaaactc tcccgctttc gtttttaaga ttttgttgac cgtctcaatt aaacgcgtga
     5581 cccgacgcgg gaaatgtcgg ggcgctctcc caagtgacac actttcgaga ggattcagga
     5641 tggggcaatc atcgcaacca catgagttag gcggcgggct gaagtcacgc cacgtcacca
     5701 tgttgtctat tgccggtgtt atcggcgcaa gtctgtttgt cggttccagc gtcgccatcg
     5761 ccgaagcggg cccggcggta ttactggcct atctgttcgc cggattactg gtggttatga
     5821 ttatgcggat gttggcggaa atggcagttg ccacgcccga taccggttcg ttttccacct
     5881 atgccgataa agccattggc cgctgggcgg gttataccat cggctggctg tactggtggt
     5941 tttgggtact ggttatcccg ctggaagcca acatcgccgc tatgatcctg cactcgtggg
     6001 ttccaggcat tcccatctgg ttattttccc tcgtcattac cctcgcctta actggcagta
     6061 atttattaag cgttaaaaac tacggcgaat ttgagttctg gctggcgctg tgcaaagtca
     6121 tcgctatcct ggcctttatt ttccttggtg cagtcgcaat tagcggtttt tacccttatg
     6181 ccgaagtgag cgggatctca agattgtggg atagcggcgg ctttatgccc aacggcttcg
     6241 gtgcggtatt aagcgcgatg ttgatcacca tgttctcgtt tatgggcgca gaaattgtca
     6301 ccattgccgc cgcggaatcc gacacgccgg aaaaacatat tgtccgcgct accaactcgg
     6361 ttatctggcg tatttctatc ttctatttgt gctctatttt tgtcgtagtg gcgttaatac
     6421 cgtggaatat gccggggctg aaagccgttg gttcttatcg ctcggttctg gaattgctca
     6481 atattcccca tgcgaaatta atcatggact gcgtgatatt actttccgta accagctgtc
     6541 tgaactcggc gctgtatacc gcgtcaagga tgctctactc cttaagccgt cgcggtgatg
     6601 cgcccgcgct aatgggcaaa atcaaccgca gtaaaacccc gtatgtggcg gtgttactct
     6661 ccaccggagc ggcattttta acggtggtgg tgaactatta cgcacctgcg aaagtgttta
     6721 aattcctgat agacagctcc ggcgctatcg ccctgctggt ttatttagtc atcgccgttt
     6781 cacagttgcg gatgcgcaaa attctgcgag cagaaggaag cgaaattcgc ttgcgcatgt
     6841 ggctttatcc ctggctcacc tggctggtca tcggctttat tacctttgtg ttggtggtga
     6901 tgttattccg cccggcgcaa cagttagaag tgatctctac cggcttatta gcgataggga
     6961 ttatctgtac cgtgccgatt atggcgcgct ggaaaaagct ggtattgtgg caaaaaacac
     7021 ccgttcataa tacgcgctga taatgatcag gagtcacacc atgaccatta cgtctctgga
     7081 tggctatcgc tggctgaaga acgatattat tctcggtaat tttcaaccgg atgaaaaatt
     7141 acgaatgagt ttgctgacat cgcgttatgc acttggcgtt gggccgttac gggaagctct
     7201 ttcgcaactg gtggcggaac ggctggtcac ggtggtgaat caaaaagggt atcgggtggc
     7261 gtctatgtca gagcaggagc tgctcgatat tttcgacgcc cgcgccaata tggaagcgat
     7321 gctggtcagt ctggcgattg cccgcggtgg cgatgaatgg gaggcagacg ttctcgcaaa
     7381 agcgcatctg ctgagtaagc tggaggcctg tgacgccagc gagaaaatgc ttgatgagtg
     7441 ggatctgcgt catcaggcgt ttcatacagc aattgtggcg ggctgtggtt ctcactattt
     7501 gctgcaaatg cgtgaacggt tgtttgatct ggcggcgcgc tatcgattta tctggctgcg
     7561 gcgaacggtg ctttcggtag aaatgctgga ggataaacac gatcagcacc agaccctgac
     7621 tgcggcggta ctggcgcgag ataccgcgcg cgccagtgag ttaatgcgcc agcatttact
     7681 gacgccaatt cccattatcc agcaggcgat ggctggcaat taactactct tccggaatac
     7741 gcaacacttg ccccggataa attttatccg ggctttttag catcggttta ttcgcttcga
     7801 agattttatt gtacagatta gcgttaccgt agacctgttt ggaaatggca ctcagagtgt
     7861 cgccagactt aacggtataa aactggctgg cagtggctgg tgtcgcagtt ttcacctgat
     7921 catcaacact ggcaataccg gaaatattcc ccaccgcaac aaggattttc tccttcgcct
     7981 cctgactcag gccgtcacca gtgaccgtcg ctttgccgtc ggcaatttga atgttcactt
     8041 tatcggcatc aggtataccg gttttgctca gatgctcctg caccttcttc gcctgatcgt
     8101 ctttatcgtg ctgacctgta accgcgtccc agagtttttc tccggcatct ttcacaaaat
     8161 tgaacagacc catagctacc tcattcgtta acggaaacac tcagaaagtg tagcagagga
     8221 acgcggcgcg ttaacgccgc gggggtgagc acaggtttaa tcgcgggttt gcacccagaa
     8281 cgcgtgaatc aaaccgggga tatacccaag cagtgtcagc agaatattaa taatgaacgc
     8341 ccaaccgaac cctttaccga gcagcacgcc gagaggcggc agaatgatgg tgatgacgat
     8401 tctccagaaa cccatatgta ctccctataa gaaaattact cattgtttaa aaagagattt
     8461 tatctcttaa gcgtagtaat tttagcggag cctgccagtt tcagcttacg cttttactct
     8521 catttacgct gctgaggctg gtatatgttg catttttagt ttagagttta cttaatttag
     8581 aaaatactta aataaatatg actgaactcg cgcaattaca ggccagtgcc gaacaggcag
     8641 cggccttatt gaaagcaatg agccatccta aacgattgct gattctgtgc atgcttagcg
     8701 gttcccccgg caccagcgcg ggagagctga cgcgcattac cggactgagt gcctctgcga
     8761 catcacagca tctcgctcgt atgcgggacg aagggcttat cgacagccaa cgggatgccc
     8821 aacgcattct atattccatt aaaaatgagg cggtaaatgc cattatcgcc accctgaaaa
     8881 atgtctattg tccgtaagga gtcactatgg ctttgacaac catttcgccg catgatgcac
     8941 aagaattaat cgcacgcggc gcaaagttaa tcgatattcg tgacgctgat gaatatcttc
     9001 gtgaacatat tcctgaagca gatctggctc cattatccgt gctggaacag tcaggtcttc
     9061 cacctaaatt acgtcgcgag caaattatat tccactgcca ggcaggtaaa cgcaccagta
     9121 ataacgccga taaattagca gcgattgccg cccccgcaga aatattttta ctcgaagatg
     9181 ggattgatgg ctggaaaaga gctggattgc cagtagcggt aaataaatct caacccttgc
     9241 cgttaatgcg ccaggtgcag atcgctgcgg gtggtttaat attaatcggc gttgtactgg
     9301 gttataccgt aaatagcggt ttcttcttat taagtggctt tgttggtgcc gggttactga
     9361 ttgcaggaat cagcggtttt tgtggaatgg caaggttgtt agataagatg ccgtggaacc
     9421 aacgagcttg agaagcgacg ccggacgcgc cctagcagcg acatccggcc tcagtaatta
     9481 gatcaggaaa tcgtcgagag atttaccttc tgccagcgcc tgagcaattg gcttcggtgt
     9541 acggccctga ccggtccagg ttttagtttc accgttaaca tcagtgaatt tatatttcgc
     9601 cggacgcggc tggcgttttt taccagcacg tggtgcagca gcagagctat tacccaataa
     9661 ctcttccggg ttaattccgt cagctttcat cagctccagc caggtgctaa ttttttcctg
     9721 acgctcagcc agttcacgct gctgctgttc ttcttcttca cgtctttctt tagtgacaac
     9781 cctgaatttt tcgagcattt cttcaagaac gtcaatggag aattcgcgag ccatcgcacg
     9841 gagggtgcga atgttattta aactttgtaa cattacggac ataataaaga aaacctttta
     9901 acgccaaaac aaaaaagtat ttcgtcgcgt agtgtaagcg atcacttatt atatttccac
     9961 aaaatttaat ctatttacag tcctgcgcga gattatttca gctgttattt tctgaaactc
    10021 tcagaataat ttcaagatta t
//
LOCUS       DAPGWB010000160        10009 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.162, whole genome shotgun sequence.
ACCESSION   DAPGWB010000160 DAPGWB010000000
VERSION     DAPGWB010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 10009)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10009)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10009
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.162"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..580)
                     /locus_tag="RHX79_003845"
     CDS             complement(<1..580)
                     /locus_tag="RHX79_003845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HDV2198960.1"
                     /translation="MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGTSRELL
                     KTLNPLCQIPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQQFQRLLVWLVA
                     NVYPTFTFADYPERWASDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDC
                     YLCTMRTWGPGHEWFQDNAQNISAIADAVCQLP"
     gene            847..2346
                     /gene="ansP"
                     /locus_tag="RHX79_003846"
     CDS             847..2346
                     /gene="ansP"
                     /locus_tag="RHX79_003846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparagine permease"
                     /protein_id="HDV2198961.1"
                     /translation="MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAI
                     GTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFL
                     GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM
                     IGVKWFAEMEFWFALIKVLAIVIFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHG
                     LLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLV
                     MLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMA
                     MGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIAS
                     WAFIIVCQMRLRKAIKQGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYT
                     IAALPIIGILLVIGWFGVRKRVAEIHSTAPVVEEDEEKQEIVFKPETAS"
     gene            complement(2461..3522)
                     /locus_tag="RHX79_003847"
     CDS             complement(2461..3522)
                     /locus_tag="RHX79_003847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HDV2198962.1"
                     /translation="MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAY
                     EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQT
                     LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
                     GKESVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKI
                     LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA
                     VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ
                     KSTKQQEATQPDDVIRIAL"
     gene            3764..5866
                     /locus_tag="RHX79_003848"
     CDS             3764..5866
                     /locus_tag="RHX79_003848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDV2198963.1"
                     /translation="MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTP
                     AAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIR
                     GIRLYVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQ
                     QPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQK
                     NLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTI
                     KQTQAGLRYERSLSAQDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQ
                     GIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERN
                     LMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPA
                     GSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNFGLKPSTNDTIEIGSKTR
                     IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNA
                     SWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMA
                     DDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYE
                     PSPGRNYGVGMNIAWRFE"
     gene            complement(5902..6567)
                     /gene="mcbR"
                     /locus_tag="RHX79_003849"
     CDS             complement(5902..6567)
                     /gene="mcbR"
                     /locus_tag="RHX79_003849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415967.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid/biofilm transcriptional regulator
                     McbR"
                     /protein_id="HDV2198964.1"
                     /translation="MPGTGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQL
                     GMSITPVREALLRLVSVNALSVAPAQAFTVPEVRKRQLDEINRIRYELELMAVALAVE
                     NLTPQDLAELQELLEKLQQAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWV
                     RMGPGLHYLYEAINPAELREHIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQ
                     YNR"
     gene            complement(6765..7802)
                     /gene="curA"
                     /locus_tag="RHX79_003850"
     CDS             complement(6765..7802)
                     /gene="curA"
                     /locus_tag="RHX79_003850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415966.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent curcumin/dihydrocurcumin
                     reductase"
                     /protein_id="HDV2198965.1"
                     /translation="MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLR
                     TVYLSLDPYMRGRMSDEPSYSPPVDIGGVMVGGTVSRVVESNHPDYQPGDWVLGYSGW
                     QDYDISSGDDLVKLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATG
                     PVGATVGQIGKLKGCRVVGVAGGAEKCRHAIEVLGFDVCLDHHADDFAEQLVKACPKG
                     IDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKR
                     IRLQGFIIAQDYGHRIHEFQKEMGQWVKEDKIHYREDITDGLENAPQTFIGLLKGKNF
                     GKVVIRVAGDD"
     gene            7983..8501
                     /gene="mddA"
                     /locus_tag="RHX79_003851"
     CDS             7983..8501
                     /gene="mddA"
                     /locus_tag="RHX79_003851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine sulfoximine/L-methionine sulfone
                     acetyltransferase"
                     /protein_id="HDV2198966.1"
                     /translation="MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFE
                     ARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLS
                     RLIDEARDCGKHVMVAGIESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQL
                     QLDERTEPDAIG"
     gene            8498..8947
                     /locus_tag="RHX79_003852"
     CDS             8498..8947
                     /locus_tag="RHX79_003852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV2198967.1"
                     /translation="MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLV
                     GIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAV
                     LVASQLIGGLMLDIFRSHGVPLRALFGPICGAILLVVGAWLVARRSF"
     gene            complement(8948..9181)
                     /locus_tag="RHX79_003853"
     CDS             complement(8948..9181)
                     /locus_tag="RHX79_003853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcY family protein"
                     /protein_id="HDV2198968.1"
                     /translation="MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQ
                     QQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL"
     gene            complement(9267..9440)
                     /gene="ortT"
                     /locus_tag="RHX79_003854"
     CDS             complement(9267..9440)
                     /gene="ortT"
                     /locus_tag="RHX79_003854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orphan toxin OrtT"
                     /protein_id="HDV2198969.1"
                     /translation="MSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATW
                     PMSFPVALLFSLF"
     gene            9635..9730
                     /gene="yncL"
                     /locus_tag="RHX79_003855"
     CDS             9635..9730
                     /gene="yncL"
                     /locus_tag="RHX79_003855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response membrane protein YncL"
                     /protein_id="HDV2198970.1"
                     /translation="MNVSSRTVVLINVFAAVGLFTLISMRFGWFI"
BASE COUNT         2406 a         2449 c         2451 g         2703 t
ORIGIN      
        1 tcggtaactg acatacagca tcagcgatcg cgctgatatt ctgcgcatta tcctgaaacc
       61 attcatgccc cggcccccat gtgcgcatgg tgcagagata acagtccacc agcgttagtt
      121 gctcaccaaa ggcataaggt tcagcggtca attgtgaatt cagccagata taaagtgatt
      181 tgcgatattc aattacattc ttctttaact gttcaggtgc gtcagatgcc caacgctcag
      241 ggtaatcggc gaaagtgaat gttggataga cattagcaac cagccagacc aatagccgtt
      301 gaaactgctg acgttcggcg cgcccaaccg gtggcgcaag gtccgggcga cgatcgagaa
      361 ccatcaatgc aatcgccgct gtctccgtca taatctcgtc attttccagc gccagtgtcg
      421 gaatctgaca caacgggttc agggttttca ataactcgcg tgaagttccc tcgtggtcaa
      481 aaccactgac atcaacgaac tgataaggaa tatcagccag tgttagcatc agctcactga
      541 ttgtagagcc ccatccgggt acgccataca ccttaatcat atgcccctca caatctttta
      601 aagattaagt gtaggacagt acacaggtta accagcaaaa ggatttgtca ttttttcgtc
      661 agttgtatta atccccttca ggattgtaag gggatgtttt gcatcgttta tcgataacgg
      721 gtaggatgct gcgccgatag ttttataccc ataaagaata atggtgataa ctatcatcgc
      781 caggatgaat aaacattgtt catggcaact tatatgactt tttcattaaa gcaatcaggg
      841 agagcaatga gtaaacacga caccgacact tcagatcaac acgccgcgaa acgccgctgg
      901 cttaatgccc acgaagaggg gtatcacaaa gcgatgggca atcgccaggt acagatgatc
      961 gccattggcg gcgcgattgg caccggcttg tttttaggtg caggagcccg actgcaaatg
     1021 gcgggtccag cactggcact ggtttattta atttgtggct tgttttcgtt ttttattctg
     1081 cgtgcattgg gtgagctggt gctacaccgc ccttccagtg gcagttttgt ctcttatgcc
     1141 cgtgagtttt tgggtgagaa agccgcttat gttgctggct ggatgtactt catcaactgg
     1201 gcgatgacgg ggattgttga tattaccgcc gtcgctctgt atatgcatta ctggggtgcg
     1261 tttggcggcg tgccgcagtg ggtctttgcg ctcgctgcac ttaccatcgt tggcaccatg
     1321 aatatgatcg gtgtgaaatg gtttgcggag atggagttct ggtttgcgct tattaaagtg
     1381 ctcgccattg tgatcttttt ggtcgtgggt acagtgttcc tcggtagtgg tcagccgctg
     1441 gatggcaaca ccactggctt tcatttaatc accgataatg gcggcttctt cccccacggt
     1501 ttgctgcctg cgctggtgtt gattcagggc gtagtgtttg cttttgcctc cattgaaatg
     1561 gtgggtacag ctgccggaga atgtaaagat ccgcagacca tggtgcctaa agcgattaac
     1621 agcgtgattt ggcgtattgg cctgttttac gtcggctccg tggtgttgct ggttatgcta
     1681 ttgccgtgga gcgcgtatca ggcggggcaa agtccgttcg tgacgttttt ctctaaactg
     1741 ggtgtgccat atatcggcag cattatgaac attgtggtgc tgaccgctgc cctctccagc
     1801 ctgaactcag gtctgtactg caccggacgt attctgcgct caatggcgat gggcggttcc
     1861 gcaccgagtt ttatggcgaa aatgagtcgt cagcatgtgc cgtatgccgg gattctggcg
     1921 acactagttg tgtatgtcgt cggcgtattc ctcaactatc tggtgccgtc gcgcgtattt
     1981 gagattgtgt tgaacttcgc gtcgctggga atcatcgctt catgggcgtt tatcatcgtg
     2041 tgccagatgc gcctgcgtaa agcaattaaa caaggcaaag cagcggatgt cagttttaaa
     2101 ctgcctggcg cgcccttcac ttcctggctg acattactgt ttttactgag tgtccttgtg
     2161 ctgatggcgt tcgattaccc gaacgggact tatactatcg cggcgctgcc gattatcggt
     2221 attctgctgg ttataggctg gtttggtgtg cgcaaacgcg ttgctgaaat tcacagcact
     2281 gcgccagtcg tcgaggaaga tgaagaaaaa caggaaattg tgtttaagcc tgaaacggcg
     2341 agctaattgc aaaattgccc ggctacgtgc cgggcaaatt tagattactg acgaaggtgt
     2401 gccgcatgcg gcgtgataaa agtcaggcaa gtctctccgt tttcaccctc gccacatcta
     2461 ttacagcgca atacgaatca catcgtccgg ctgggtagct tcctgctgtt tagtggattt
     2521 ttgtttcaca ctgacataca gcgttttgcc atcggcagac agcgccaggc tgtttggatg
     2581 agtcggcgta tcgaacgttt tcaccacttt atagcttttc gcgtcaatca cactgacttt
     2641 acctgcctga cgatgcgtta cgtaggcttc attacgcgct gggttaaaca gcacagccag
     2701 tgattctggt gccgcaacct tcgccagaat attgccatta cgggtatcga ccactaacac
     2761 ttctgcggct ttagaatcgg tgataaatgc acgctgcctg gcggtatcaa ggctaatgtt
     2821 gataaagaag tgctctttgc cgtcatccag cagcttttta cggctgagga ttttattgtc
     2881 ggcggtgtcg atggtaatca attcgccgtc agcgttagtg gtgtaaagac gtttgccttt
     2941 gctatccagc gccagaccgg tactcatttt accggtgttc tggatggcgg ttttcagttt
     3001 gatattctcg ccatcaacga cccaaatcac gctctcttta ccaataccac tgatgtaaac
     3061 ggtgttcgtg gcatcatcag ctaccagctc acgcggttgc agcgggcgca cctcttccgt
     3121 gcgcttacga tcatccagca ccagacggcc tttcacctcg cccgttttgg catctatcgc
     3181 cgtgaccgcg ctgtttacgg tgttaccaaa ccacaacgtc tgagtcgtgt tattgatggt
     3241 ggcaccaaac ggcttgagat cgttatggat cgcctgcgtc acttccagag tgaccggatc
     3301 aagacgataa accacgccac ctttatccag tttgcggctt tgcgaagtgg cgagccacag
     3361 tgcgttttct tgctggctat aagccatttc gtaggcacct ttacctaccg ctttacgcag
     3421 catttcttct gcggcctgcg tactgaatga tgaagcaaca agcaatgaac ctaacagtaa
     3481 tgaaccacgc aggcgcgatg aaaacagatg acgtaaatgc atgacgactc cctttgatga
     3541 accgatattt ttgctgcttc acaatgcttc gctaagcgta atcatcgtta cgctcttgtt
     3601 ataaatggga atggtaatca ttattttctc aaatgtggag catttcttgc cgttacgact
     3661 acaattttct caattactta acgtatcgtg ccgtttcgtt ttccataaat ttacaatttc
     3721 attaccataa cggcgttttc ccattcttaa cctggctttt ttcatgaaga ttttttccgt
     3781 ccgacagacc gttttgcccg cactgcttgt cctttccccc gttgtttttg ccgctgatga
     3841 acagactatg attgtcagtg ccgcaccgca ggtggtttca gaactggata ccccagcagc
     3901 agtaagcgtg gtggatggcg aggagatgcg cctggcaaca ccgcgcatta acttgtccga
     3961 atcactgacc ggcgtgcctg gtttgcaggt acaaaaccgg cagaactatg cgcaagattt
     4021 acagctgtcg attcgcggat ttggctcccg ctccacttac ggtattcgcg gtattcgcct
     4081 gtatgtggac ggtattcccg ccaccatgcc cgacgggcaa gggcaaacat ccaacatcga
     4141 tttaagcagt gtgcaaaatg tggaagtgct gcgtggcccc ttctctgccc tgtatggcaa
     4201 cgcgtctggt ggggtaatga atgtcaccac ccagaccgga caacagccac caaccattga
     4261 agccagtagt tactacggca gttttggcag ctggcgctat gggctgaaag caacgggcgc
     4321 aacgggagac ggcacacagc ctggcgatgt cgattacacc gtctcaacca cgcgttttac
     4381 gacccacggc tatcgtgacc atagtggcgc acagaaaaat ttagctaatg ccaaactggg
     4441 cgtacgcatt gatgaagcca gcaaattaag tctgattttc aatagtgtgg atatcaaagc
     4501 agatgaccca ggtgggctaa ccaaagcaga atggaaggct aatccacaac aagcgcctcg
     4561 tgcagaacag tacgacacgc gaaaaaccat caagcaaact caggctgggt tgcgctatga
     4621 gcgtagcctg agcgcgcaag atgatatgag tgtgatgatg tatgccggag agcgagaaac
     4681 gacccagtac cagtcaatcc cgatggcccc ccaacttaac ccgtcacatg cgggcggcgt
     4741 gattaccctg caacgccatt accaggggat agacagccgc tggacacacc gtggtgaact
     4801 gggcgttccg gtcacgttca ctaccggcct gaactacgaa aacatgagtg aaaaccgcaa
     4861 gggctacaat aacttccgcc tgaatagcgg catgccggag tacgggcaaa aaggtgagtt
     4921 gcgtcgcgac gaacgcaatc tgatgtggaa catcgatccc tatttacaga cgcagtggca
     4981 gctgagcgaa aaactgtcgc tggatgctgg cgtgcgctac agctccgtgt ggtttgattc
     5041 caacgaccat tacgttactc cgggtaacgg cgatgacagc ggtgatgcca gttatcataa
     5101 atggctacct gccggttcgt taaaatatgc aatgaccgat gcctggaata tctatctggc
     5161 agccgggcga ggttttgaaa cgccgacgat taatgagctg tcttatcgtg ctgatgggca
     5221 aagcggtatg aactttggtt taaaaccatc caccaacgat acaattgaga tcggcagtaa
     5281 aacgcgtatt ggtgatgggc tgcttagtct cgcattgttt cagaccgaca ctgatgatga
     5341 aattgttgtc gatagcagta gcggtgggcg tacgacttac aaaaatgccg gaaagacccg
     5401 tcgtcaaggc gctgaactgg catgggatca acgtttcgca ggagattttc gcgtaaacgc
     5461 gtcctggacc tggcttgatg cgacctatcg cagcaatgtt tgcaatgaac aggattgtaa
     5521 cggtaatcgg atgccaggga tcgcccgtaa tatgggcttt gcgtcgatag gttatgtacc
     5581 ggaagatggt tggtatgcag gcacggaagc gcgttatatg ggcgatatta tggcagatga
     5641 tgaaaatacg gcaaaagcgc cgtcttatac tctcgtcggc ttattcaccg ggtataaata
     5701 caattaccac aatttaactg tggatttatt tggtcgtgtc gataatttat tcgataaaga
     5761 atacgttggt tctgtcattg tcaatgagtc aaacgggcga tattacgaac cttcgcccgg
     5821 acgaaattat ggtgtcggca tgaatattgc gtggagattt gagtaattac cttgatgccc
     5881 ggtatttgcc gggcatttac tttaacgatt gtattgctgg tataaaatag caatattttg
     5941 ttgcataatt tcagcaagac aatgtctgca tccctctttg tcttttgctt ttaacgcagc
     6001 gagtaacaga tgatagtttt ctatatgctc ccgtaattcc gctggattaa tcgcttcata
     6061 gagataatgt aaaccaggcc ccatcctgac ccacagttgc tcaatcatct cacacaggat
     6121 gggcatattt gagcgatgat aaatcgctaa gcgaaatagc ctgtttacat taatgatttg
     6181 ttccatgtcg cccttttctt gcgcctgctg taatttctcg agcaattcct ggagttccgc
     6241 caggtcttgc ggggtgaggt tttcaacagc cagagcaact gccattaatt ccagttcgta
     6301 gcggatccga ttgatttcgt ctaattgacg tttcctcact tccggaactg taaatgcttg
     6361 tgcaggtgcg acagaaagcg cattcaccga aaccagacgt aataatgctt cacgcacagg
     6421 tgtaatactc atacctaatt gctccgccag atttttagta atcaggcgtg cgccaggttt
     6481 taatgcgcca atactaagct gatgtttcag gtcgttctca acctgcagag tcaaactgac
     6541 atgtttcatt tttcccgttc caggcatttt aattccttcg cgtgttttct gtccaaccct
     6601 gcctgcatgg cagaaggagt tcacctggtg tattaaagtg aataatcata aaccactcac
     6661 ctttgttgtt attagcagca gaacaatgac gtggttagtt aattaaagct gaaaataagc
     6721 tttttgcctg gatttttatg gcggcttacg ccgccgttga aactttaatc atcacccgcg
     6781 acgcggatca ccactttgcc gaagttttta cccttcagca ggccgataaa cgtctgtggc
     6841 gcattctcta aaccatcagt aatatcttcg cggtagtgga ttttatcctc tttcacccat
     6901 tgccccatct ccttctgaaa ctcatggatg cggtgaccat aatcctgagc gataataaac
     6961 ccttgcaagc gaatacgttt tttcagcacc gttgccatca acaggggtaa acgatccgga
     7021 ccgggtggta gctctgtagc gttatagctg ctcactaagc cacaaacggg aatgcgcgca
     7081 gatgtattaa gtaatggtag cactgcatca aataccttac cgcccacgtt ttcataatag
     7141 atatcaatac cttttgggca cgctttcacc agttgttcgg caaaatcatc cgcgtggtga
     7201 tcaagacaaa catcgaagcc cagcacctcg atagcatggc ggcatttttc cgcgccaccg
     7261 gcaaccccca ccaccctgca acctttaagt ttgccgattt gccccaccgt tgctcccaca
     7321 ggacctgtcg ccgcagctac caccaacgtt tcgccctctt taggctgacc gatatccagc
     7381 agccccatat aagcggtaaa gcctggcatc cccagcacac ccagcgacca cgatggattt
     7441 tgcggatgat cgccaagttt caccagatca tcaccactgg atatgtcata gtcctgccat
     7501 ccactgtagc ccagcaccca gtcgccaggc tgataatcag gatgattcga ctccacaaca
     7561 cggctcaccg tgccgccgac catcacgccg ccaatatcaa caggcggtga ataagatggc
     7621 tcatcgctca tacgtccacg catatacggg tccagggaca aataaactgt gcgcagtaac
     7681 acctgtcctt cacccggtgt ggcgacatca tcttcttcaa gacggaaatt ctccggaacc
     7741 ggtgcgccat gtggacgcga ggccagaacc caacgtcgat tacgctgctt ttgttgcccc
     7801 ataatgctct cctgtgcttt tggcatgaat ccatcaatag tagcaggctc acgggattgg
     7861 ttttgtttgc agccgtcaca tcccctctgc aacacgcaat aatttcatcg aggaatccgt
     7921 tgcttcgggc tgttttcgat agtattgata acatcatcat cattatttta tcgaggccag
     7981 acatgtccat ccgttttgcc cgcaaagccg attgtgctgc cattgcggaa atttataacc
     8041 acgccgtgtt gtatacggcg gctatctgga atgaccaaac ggttgatgca gataaccgca
     8101 ttgcctggtt tgaagcgcgg accatagcag gttatccggt gctggtgagt gaagaagatg
     8161 gcgtagtgac gggatatgcc tcgtttggcg actggcgtag tttcgatggt tttcgccata
     8221 ccgtggaaca ttcggtttat gtccatcccg atcatcaggg caaaggtctg gggcgtaaat
     8281 tgttaagccg attgattgat gaagcgcggg attgcgggaa gcatgtcatg gtcgccggga
     8341 tcgaatcgca aaatcaggcc tcgctgcatc tgcaccagtc gctgggattt gtcgtcaccg
     8401 cacaaatgcc gcaggtgggc actaaatttg ggcgctggct ggatctgaca tttatgcagt
     8461 tgcaactcga cgaacgcact gaaccggacg cgattggatg aatcagtcgc tcacccttgc
     8521 ttttttgatt gccgccggaa ttggtctggt agtccagaac acgctgatgg tgcgcatcac
     8581 ccagacctcc tctaccattc tcatcgccat gttgctgaac tcactggtgg ggattgtgct
     8641 ctttgtttct attttatggt ttaaacaagg catggcgggg tttggcgaac tggtgtccag
     8701 cgtgcgctgg tggacactta tacccggctt gctgggatcg ttttttgtct tcgccagtat
     8761 cagcggatat cagaatgtgg gagcggcgac aactattgca gtactggtcg ccagccagct
     8821 aattggcggt ctgatgctgg atatcttccg cagtcatggc gtaccactac gggcgttgtt
     8881 cggcccaatt tgtggcgcaa ttttacttgt ggttggcgcc tggttggtag ccagacgctc
     8941 attttaatca gaggatggtg ccgcctttgg ttaactgttc gtggcgcgct tccatatctt
     9001 ctttatgctt gcgaccgtga tgagcaatag cggtgcgcaa acgctgctgc tgggtgtagc
     9061 gatcttcccg acttaactcc gcgtcatcgc tcagggcgat taataattcg ttcatatggg
     9121 caatgacgct ctcttcaatc gcggcatcca cgcgcgcgat gacttcatcc agatgcgaca
     9181 tactttctcc ttaaccactt gtgaaattta tcgattcatc caaatgatat aagtctgcgt
     9241 ggtgccgtca agccagtgag taagatttaa aacagtgaaa acaacagcgc caccgggaaa
     9301 ctcatcggcc atgttgcccc caccagaaag gcgcttaaga aacggatgcg tttcttatcg
     9361 tgagaaagaa accaggtgat aagaaatgcg attgctgcca taaccgcata aaaaacaagc
     9421 atatgttgat agagagacat gtacgggcgt ccagccagat gaataaaacg cgcgcaaata
     9481 tgcgtcattt tttgacgtac atcaagtttt ttcaccagtt tgagaaaaaa tcatcaaaca
     9541 gcaacttgcc cttatccatc ttcagaatga gtattattgc ggattttctt aacccgtact
     9601 atacacatag gggcaatgat aaaaggtggc aaaaatgaat gtttccagta gaactgtagt
     9661 actgataaat gtctttgctg ctgttggttt gtttactctt atctctatga gatttggctg
     9721 gtttatttga tgtagtgatt ttgcacgcag cacgtactgt cagagaaatc aactctctga
     9781 cagtacgcaa gatcttctca tactctccag gtttacaaca ttatccttaa tatttacttc
     9841 tttttgctgg catctacatt gaaatgagta gaaaacatcc ccctactgtc gtctatacaa
     9901 acagcttact gattcaaacg gaatcttgtt ttcacatttt tctatcatga atactttata
     9961 cgcgcgggag tctataaatg ctttatactt tcaaggaata acgtaaata
//
LOCUS       DAPGWB010000161         9837 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.163, whole genome shotgun sequence.
ACCESSION   DAPGWB010000161 DAPGWB010000000
VERSION     DAPGWB010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9837
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.163"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..148)
                     /locus_tag="RHX79_003856"
     CDS             complement(<1..148)
                     /locus_tag="RHX79_003856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198971.1"
                     /translation="MLQSSADKACNVLVKKVRYLKDVRKITKMMNGKLIYSWLKWPCG
                     EFFSL"
     gene            226..1320
                     /gene="ddlA"
                     /locus_tag="RHX79_003857"
     CDS             226..1320
                     /gene="ddlA"
                     /locus_tag="RHX79_003857"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDV2198972.1"
                     /translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID
                     KQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVI
                     FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT
                     LTRANRHNISFAEVESKLGLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV
                     IVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP
                     EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA
                     SGLGYTDLITRLIELALERHAADNALKTTM"
     gene            complement(1344..1556)
                     /locus_tag="RHX79_003858"
     CDS             complement(1344..1556)
                     /locus_tag="RHX79_003858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414914.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2754 domain-containing protein"
                     /protein_id="HDV2198973.1"
                     /translation="MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVG
                     LVTWVISFWLAGLIIRRRDEETENAQ"
     gene            1816..2124
                     /locus_tag="RHX79_003859"
     CDS             1816..2124
                     /locus_tag="RHX79_003859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiY family protein"
                     /protein_id="HDV2198974.1"
                     /translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL
                     LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ
                     "
     gene            complement(2183..3277)
                     /gene="yaiW"
                     /locus_tag="RHX79_003860"
     CDS             complement(2183..3277)
                     /gene="yaiW"
                     /locus_tag="RHX79_003860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-exposed outer membrane lipoprotein YaiW"
                     /protein_id="HDV2198975.1"
                     /translation="MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ
                     KMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIA
                     WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM
                     GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL
                     NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE
                     LATRKLAAKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAKTGKSLPREMLPGI
                     QLESPKITRNLTTAWFAKRVDERRARCMKQ"
     gene            complement(3290..4510)
                     /gene="sbmA"
                     /locus_tag="RHX79_003861"
     CDS             complement(3290..4510)
                     /gene="sbmA"
                     /locus_tag="RHX79_003861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706191.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide antibiotic transporter SbmA"
                     /protein_id="HDV2198976.1"
                     /translation="MFKSFFPKPGAFFLSAFVWALIAVIFWQAGGGDWVARITGASGQ
                     IPISAARFWSLDFLIFYAYYIVCVGLFAFFWFIYSPHRWQYWSILGTALIIFVTWFLV
                     EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS
                     HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIA
                     FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE
                     AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG
                     LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE
                     LDGDKIQEVTHTLS"
     gene            4862..6019
                     /gene="ampH"
                     /locus_tag="RHX79_003862"
     CDS             4862..6019
                     /gene="ampH"
                     /locus_tag="RHX79_003862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine-
                     carboxypeptidase/endopeptidase AmpH"
                     /protein_id="HDV2198977.1"
                     /translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY
                     GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLD
                     QGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT
                     REQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMK
                     DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR
                     SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGF
                     ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS"
     gene            complement(6020..6643)
                     /gene="iprA"
                     /locus_tag="RHX79_003863"
     CDS             complement(6020..6643)
                     /gene="iprA"
                     /locus_tag="RHX79_003863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide resistance inhibitor IprA"
                     /protein_id="HDV2198978.1"
                     /translation="MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNSEDT
                     FVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQT
                     ITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRI
                     GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY"
     gene            complement(6731..9709)
                     /gene="ehaB"
                     /locus_tag="RHX79_003864"
     CDS             complement(6731..9709)
                     /gene="ehaB"
                     /locus_tag="RHX79_003864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin EhaB"
                     /protein_id="HDV2198979.1"
                     /translation="MHSWKKKLVVSQLALACTLAITSQANAATNDISGQTYNTFHHYN
                     DATYADDVYYDGYVGWNNYAADSYYNGDIYPVINNATVNGVISTYYLDDGISTNTNAN
                     SLTIKNSTIHGMIYSECMTTDCAERANDYYHDRLALTVDNSTIDDNYEHYTYNGTYNN
                     AADTHVVNVFNIGTAITLDQEVDLSISNNSHVAGITLTQGYEWEDIDDNTVSTGVNSS
                     EVFNNTITVKDSTVTSGSWSDEGTSGWFGNTGNASDYNGGDWNRDDIALAVIAHPAAD
                     NAMQTTATFDNSTLMGDVFFSSNFDENFFPHGRDSYRDADGDVDTNGWDGTDRLDLTL
                     NNGSKWVGAAMSAHLTVDTNDDGVPDAYGPVYNDNGVVIDTSTGTEATATLIDIAANS
                     LWPSSTVGVENSDSEYSEFDHIIGNEVYQSGLFNVTLNTGSQWDTTKTSLIDTLSINS
                     GSTVNVADSTLISDSISLTGLSALNINEDGHVATDSLTVDNSTVTISDEVSAGWAVGD
                     AALYANNIKVTNDGILDVGNTAANALQVDTLNLTSTTDTSGNIHAGVFNIESNRFVLD
                     ADLTNDRTNDTTKSNYGYGLIAMNSDGHLTINGNGDNDNTASIEAGQNEVDNNGDHVA
                     AATGNYKVRIDNATGAGSIADYNGNELIYVNDKNSNATFSAANKADLGAYTYQAEQRG
                     NTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFG
                     GNFNGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDS
                     QTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYD
                     FKLGDAGYVTPYGSISGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSED
                     QALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANY
                     LGGGDVDQDWSANVGVKYTW"
BASE COUNT         2521 a         2439 c         2363 g         2514 t
ORIGIN      
        1 taagagaaaa aaactcaccg catggccatt taagccagga ataaattagc ttcccgttca
       61 tcatttttgt gatcttgcgc acatctttga gataacgcac tttcttcacc agtacgttgc
      121 acgctttgtc agcagaagat tgcaacaatc tttcagaagg ccgcgaatcc cccgttttgt
      181 cgtggtaatg tatgcacttt gtgttagacg ggataggttt ttaagatgga aaaactgcgg
      241 gtaggaatcg tttttggtgg taaatcagcg gaacatgaag tgtctctgca atcggcaaaa
      301 aacattgtcg atgccattga taaaagtcgc ttcgacgttg tgctgctggg cattgataaa
      361 caagggcaat ggcacgtcag cgatgccagc aattatctgc taaatgcaga cgatcctgcc
      421 catattgcgt tgcgcccttc ggcgaccagc cttgcgcagg tgccaggtaa acatgagcat
      481 cagcttatcg acgcgcaaaa cggtcagccg ttgccgacgg tggatgtcat tttcccgatt
      541 gtccacggta cgctgggcga agatggttcc ttgcagggaa tgctgcgggt cgccaattta
      601 ccgtttgtag gttctgatgt tctggcttca gcagcctgta tggataaaga tgtcaccaaa
      661 cgtctgctac gcgatgccgg gctgaacatt gcgccattta ttaccctgac gcgcgctaat
      721 cgtcacaaca tcagttttgc cgaagtggag tctaaactgg ggttaccact gtttgtaaaa
      781 ccggctaatc agggctcttc tgttggtgtc agcaaagtaa ccagtgaaga acagtacgca
      841 attgccgtcg atctggcgtt cgaattcgat cataaagtga tcgttgagca agggatcaaa
      901 ggtcgtgaga tcgaatgcgc agttctgggc aacgacaacc cgcaagccag cacctgtggc
      961 gagatcgtac tcaccagcga tttctatgcc tacgacacca agtacattga cgaagatggc
     1021 gcgaaagtgg tagttccggc agccattgca ccagagatca acgataagat ccgggcgatt
     1081 gccgttcagg cttatcagac gttgggatgc gcaggcatgg cgcgtgtaga cgtgttttta
     1141 accccagaga acgaagtggt gatcaacgag atcaacacac tgcctggctt caccaacatc
     1201 agtatgtatc cgaagctgtg gcaagccagc ggtctgggtt acaccgatct gatcacacgt
     1261 ttgattgagc tggcgctgga gcgtcacgct gcggataacg cattgaaaac cacaatgtaa
     1321 tattttaacg cccgataata ttcttattgg gcgttttcag tttcttcatc gcgacgacga
     1381 ataatcaacc ccgccagcca gaaactaatc acccacgtca ccagaccgac ggcataggtc
     1441 tgccaacctt ttgcttcaaa tcccagtaac cccaccacgc cattaagaat gaatataagg
     1501 ccaatggcga acgcatagta gtgccagtca cggcggattt ttacaggcag attcatggca
     1561 gctccgttaa cgaaaaacaa catccttgca tattctgtaa caaccgtctg tggtgtagac
     1621 aacattttcg taattgttaa taaatttaac ttaaggttgc cattttgtga ctcacaacga
     1681 agattcacgc ttcgggaata ttcccaacat caatttacca tgattctgat attgacaatc
     1741 taaaggacct gtcagacttg ccataagccg ctggtatcac accagaagag aagcagatga
     1801 cttccggagg tttttatggc tgatttcacc ctgtcaaaat cgctgtttag cggaaaatat
     1861 cgcaatgcct cttcaacgcc tggcaacatt gcctatgcgt tgtttgtgct gttttgcttt
     1921 tgggctgggg cgcaattgct gaacctgtta gtgcatgcgc ccggcgtcta tgagcgttta
     1981 atgcaggtcc aggaaacagg tcgcccacgg gtggaaattg gtttaggtgt cggcaccatt
     2041 ttcgggctga tcccgttttt agtaggctgc ctcatttttg cagtggtggc gctatggctg
     2101 cactggcgac atcgccgcca gtaagattta cgttgccaga tacggcctaa aacgccttat
     2161 ctggcatgac attcctgttt gatcactgtt tcatacaacg cgcccgccgt tcgtctacgc
     2221 gcttcgcaaa ccaggccgta gtcaggttgc gggtgatttt cgggctttcc agttgaatgc
     2281 caggcaacat ttcgcggggt agtgatttac ccgttttcgc ttcggcaagt tgataaactt
     2341 tcttgtacag cgccgtctcc tcaaaagaga agctgtcacc tttctctaac tgacggcgaa
     2401 tttcgctgtc gctcatcccc agttttgccg ccagtttgcg cgttgccagt tcggttttcc
     2461 cgggttcttt actgtcgtaa cgaattaaat caccgtccag tgccagcttc acgccgctgg
     2521 ccttactgac cgcgttctga aacgcggcat tacggctggc gtaccagcca gcgttaaaat
     2581 cagcaaagcg gtatatcggt gcgctatagc tggcgggata attcagtaaa tggtaagtac
     2641 caaaccacaa cccgccgcgg cgactgaaga cttcctgacg aactgtaccg tccattttcc
     2701 acggataccc tttggtatgc tgttcggcaa aagcaatgct aacctgcatc ggcccaccgg
     2761 tgcgcacagg attaagcgaa ccaaacagcg tctgccccat tggtaccatg ctgatcagat
     2821 cgtcaaaaat cgcgctcaat tgcttttctg tacgcaccga atctaaccgt tcgctataac
     2881 ttttgccgtt tggcgatttg atttttagcg cggtatgaac cagaaaagca ggaatgtgca
     2941 tccgttcagc acgacggtca atctcttgcc aggcgatctt gcttaagccc ggaacggccg
     3001 gatctgcctg ataatttgac tcctgctgcg ccaccgccag caccgagcag acgttttcca
     3061 gcgtcggtgc cagcccctga ctttcaaagg tggtggcgag atctttcgcc caggcatcgc
     3121 ggtctttcac gctcgcaggc atcttctgcc gcacgacgct cgctacatct atcgcttttt
     3181 cgcccttttt caacggttgc ggagcctgac tactacaccc cgctaaaacc agaaccgcca
     3241 acaatgacag cgaagataga tgattgacgc gcgacattac ttctcctttt tagctcaagg
     3301 tatgggttac ttcctgaatt ttgtcaccat ccagctcatg ttcaaagctg cgcagacgtt
     3361 tgtagataga catcaactca accagtgtgg tccatgagtt aatcaggtac tggaaagcac
     3421 cgcgaacctg accaaaaacg ttggtaatct gcgtcatcag gccgagcgta atcgtaccgg
     3481 caacaattga cggaaacagc aagaacaaac cgaaaacgtt atcgacctgc aaatagagaa
     3541 tgcgggcgat gttgaaatac atatagtgaa aatagaggcg aaaatagttt ttccgtacgg
     3601 cgctaaacag ctcgcgtacc gtaggcggcg tcgcgcgcgt ggcatcgtct tcaccataaa
     3661 ccagctcttt acggtaggcg gcctctactc gctggttttt aaactccagc cccggcagtt
     3721 tgatccctac cactgccagc aatccggtcc ccatcagcga ccagacgata gcggcaatca
     3781 ccagaccata cggaatgtgc ccgataatcg gcagctccgg cacatgcgcg gagagcgtta
     3841 ccagcaccgg cagaaaggcg atcaacgtca tgatggcgtt gataaaactg acgcccatat
     3901 tctccagcgt tgaagcaaaa cgcatggtgt cttcctgcac acgctgtgcg gcaccttcga
     3961 tatgacgcag ttgttgccag ttcgccatgt aatattcgtt catcgccgta cgccagcgga
     4021 acacatagtg actgacaaag aagttgttca gtacactgat caccaccgcg atcagcgcaa
     4081 tccccagaaa gacgcccact tcgcggtaaa attgttcgat agtgacttta tgcggcgaac
     4141 ttagcgcggt ttgaatcaga tcatagaacg gtgcatacca ggcgttgacg gcgaccccga
     4201 cttccaccaa aaaccaggtg acgaagatga tcagtgcagt accgagtatt gaccagtatt
     4261 gccaacggtg cgggctgtag ataaaccaga aaaatgcaaa aagtcctacg caaacaatgt
     4321 agtaagcgta aaaaatcagg aaatccaacg accagaaacg cgcggcgcta atcgggatct
     4381 gcccggaagc gccggtgata cgcgccaccc agtcaccccc accggcttgc cagaagataa
     4441 cggcaatcaa tgcccaaaca aaggccgaga gaaaaaacgc tcccggcttt gggaaaaaag
     4501 acttaaacat atgcactcct gctaacttct tatcgtttta acaactgctg tgtattaacc
     4561 gcatgaccgc tacaaagcgt cagccaaatg aaaccgccca ttgtgaccca tagcaaggcg
     4621 cttagttcgc cagcctgacc ataagaattg tttcgacgga tttcacaaac caaagattgt
     4681 ttacataagc ggattaacac gcgcaggatc acaaatgcag gcattggtga gcaggaaaaa
     4741 gatcgtgttt acgcgccgtt acgtttttaa cactattatt gcactaattc gccctttgca
     4801 atccatcaat gagtagtata aatacgctca gttaccttca ttcaatctat ggacaccacc
     4861 gttgaaacgt agtctgcttt tttctgccgt gctgtgtgcg gcgtcattga cctccgtcca
     4921 tgcggcgcag ccgatcactg aaccggagtt tgcctctgat attgtcgatc gttatgccga
     4981 tcatattttt tacggcagcg gtgccacggg gatggcgctg gttgttatcg acggtaacca
     5041 gcgcgtcttt cgtagttatg gcgaaacgcg acctggtaat aacgttcgcc cgcagctgga
     5101 ttcggtcgtg cgtattgctt ccctcaccaa actaatgacc agtgaaatgc tggtgaaatt
     5161 gctcgaccag gggaccgtaa agttaaacga tccgctaagt aaatatgctc cgccaggcgc
     5221 acgcgtgccg acctacaatg ggacgcccat taccctagtg aatctggcaa cccataccag
     5281 cgccctgccc cgtgaacagc ccggtggcgc ggcacatcgt ccggtgtttg tctggccaac
     5341 gcgcgaacaa cgctggaaat acctttctac ggcgaagcta aaagccgcgc caggcagtca
     5401 ggcggcgtac tctaaccttg cgttcgacct gctggcagat gcactggcga atgcgtccgg
     5461 caagccttat acccagttgt ttgaagagca gattacccgt ccattgggga tgaaagacac
     5521 cacctacacc ccctcaccgg atcagtgccg ccgtttaatg gttgctgagc gcggtgccag
     5581 tccgtgcaat aacacgctgg cggcaattgg cagcggcggc gtctattcca cgcctggcga
     5641 tatgatgcgc tggatgcagc agtatttgtc atctgatttt tatcagcgca gtaaccaggc
     5701 agatcgcatg cagacgttga tttatcagcg cgcgcagttt acgaaagtga ttggcatgga
     5761 tgtccccggc aaagcggatg cgcttggttt aggctgggta tatatggccc cgaaagaggg
     5821 tcgtccgggg attattcaga agacaggagg tggtggcggt ttcattacct atatggcgat
     5881 gatcccgcag aagaatattg gcgcgtttgt ggtggtcact cgttcgccgt tgacgcgctt
     5941 taaaaatatg agcgatggca tcaatgatct ggtgaccgag ctaagcggga ataaaccgtt
     6001 ggttatcccc gcatcctgat taatactctg aaggcaaacg gttgatagcg accagtttgc
     6061 ctttattcat ttcgatatag ccgcctttac gcaaagcagc gagaacttct gcgacgacag
     6121 aacgcgatat gcgtgtacgt tgatggatat aattcatcac accaatacgt gatcgcaatt
     6181 cttcattcca gtcaatcatt gataataatg ttgcgcggat ttgttcgtag gaattatgcc
     6241 caatgagctg cacgtcgcgt aattccagaa ttctattttg ccaggctaac cagtaaaaag
     6301 cgtctcgcca gagttgattt tgttcaataa gcgtaatggt ttgtttggct ggtagatgat
     6361 atcccgtaca atttccttct gatattaatt tgtatggtat atcgtttttc attaaaccat
     6421 cagccagccc cataatataa ggagcctggg taataccgat aagtacgttt tcttctctac
     6481 gcagagagat aacgccctct aaaataacga aagtatcttc gctattgaca tcactggaaa
     6541 atataacttg cttttcatta ttaaactcga agcgcgtacc gtatctggac aaacatttat
     6601 cgagcttacc aaattcctga agaggtttaa ctacagataa catttgcgcg tcctttgcag
     6661 taatgcccgt caaatccttg acgggcatta tttagattaa attaccagaa tttcttcgga
     6721 gtgaagaata ttaccaggta tatttaacac ccacgttcgc ggaccagtct tgatctacgt
     6781 caccaccacc gaggtagtta gcatcggtat aggcgctgaa gttcttggtg aagctgaact
     6841 gagtacccag accaacacgt accgcagacc cttcagtacc gttatcgatg gaatcaccgt
     6901 tcacatcgtt atcgttgtta gagtcgtcgt agacgtaagc cagtttgaag tacggagtca
     6961 gagcctggtc ttcgctgtag gtgaaggtat aacctgcatc tacacccagt tcataacgca
     7021 tgctgtcgta agactgaccg tcaactttca tgtcgttgct cagctggtag tcatcaccag
     7081 actggaacag accagaaatg ctgccgtaag gagtcacgta accagcatca cccagtttga
     7141 agtcgtaacc ggctttcaaa ccgaagcccc aagcgtcgga gttggtgcta ccgtcaacgt
     7201 aagtaccgtt gctcatggtt gcagacaggt cgttgttgaa gtgagagtaa ctcaagctac
     7261 catcaacaaa gacgttgttc gcgaagtgag cagaagagta gatgtaggca gtctggctgt
     7321 cttgatccac ctgaccagaa cggtcattca tgtcaccttt agcgaagcct gcagccgcac
     7381 cgacgatcca cttagcgttg ttaccgtcaa ttttggtatc aacaccgacc atgatgccgt
     7441 taacatcctg atcatagttg atggtgccgt tgtcgccgtt gaagttacca ccgaagtagc
     7501 ttacccatgc gccgccgtta tcagccaggc catgacgaga gttggtcaga cgagtaccaa
     7561 cggtgtcttg ttccaggttc cagatattgg tgttcgcaga cgggatgctc agcgccatgt
     7621 tagcgtagtc ggtcagctcc atctgttgca gaacaacggt gttaccgcgc tgttcagcct
     7681 gataggtgta tgcacccagg tcagctttgt tagcagcaga gaaggtcgcg ttgctgtttt
     7741 tgtcgttgac gtagatcagc tcgttgccgt tgtagtcagc gatagaacca gcaccagtag
     7801 cgttgtcgat acgaactttg tagttaccgg ttgcagctgc aacatggtca ccgttgttat
     7861 caacttcgtt ctgaccagct tcgatagaag cagtgttgtc gttatcgccg ttaccgttaa
     7921 tggtcaggtg accatcagag ttcattgcga ttaagccata accgtagttt gacttggtag
     7981 tatcgttggt acggtcgttg gtcaggtctg catcaagtac gaagcggttg ctttcgatgt
     8041 tgaacacacc agcgtgaatg ttaccactgg tatcagtagt gctggtcagg ttcagagtat
     8101 caacctgcag agcattcgcc gcagtgttac cgacatccag aataccgtca ttagtcactt
     8161 tgatgttgtt ggcatacaga gcagcatcac ctacagccca accagcagaa acttcatcag
     8221 aaatggttac ggtactgttg tcgacagtca gtgaatcagt tgcaacatga ccatcttcgt
     8281 tgatgttcag cgcagaaaga cctgtcagag agatagagtc agaaatcagc gttgaatcag
     8341 caacattaac agttgaacca ctgttgatgc tcagagtatc aatcagagaa gttttggtgg
     8401 tatcccactg tgaaccggta ttcagggtca cattgaacag accgctctgg taaacttcgt
     8461 taccgatgat gtgatcaaat tcgctgtatt cagagtcgct gttttctacg ccaacagttg
     8521 atgaaggcca caggctgtta gctgcgatgt cgatcagagt tgcagttgct tcggtgcctg
     8581 tactggtatc aataacaacc ccgttatcat tgtaaacagg accgtaagca tctggcacac
     8641 catcatcatt ggtatcaaca gttaagtgcg cagacattgc cgcaccaacc cacttgctgc
     8701 cattattcag ggtcagatcc aggcgatcag taccatccca accgttagta tctacatcac
     8761 cgtcagcatc acgatagcta tcacgaccat gcgggaagaa gttctcatca aagttacttg
     8821 agaagaatac atcgcccatc agtgtagaat tatcgaatgt tgcagtggtt tgcattgcgt
     8881 tatcagcagc aggatgtgca ataacggcta atgcgatatc atctctattc cagtcaccgc
     8941 cattgtaatc gctggcattg ccggtattac caaaccaacc actagtacct tcatcagacc
     9001 atgaaccaga ggtcacagta gagtctttaa cagtgatggt gttgttaaac acttcgctgc
     9061 tgttaacacc agtgctaacc gtgttgtcgt cgatatcttc ccactcgtaa ccctgagtca
     9121 gcgtaatacc cgctacgtga gagttattag agatggacag atcaacttcc tgatccagag
     9181 tgatggcagt accgatgtta aatacattta caacatgagt gtcagcggca ttattgtagg
     9241 tgccgttata tgtgtagtgt tcgtagttgt cgtcgatcgt tgaattatca acagtcagcg
     9301 ccagacggtc atggtaataa tcattcgcac gttcagcaca atcagttgtc atgcactcgg
     9361 aataaatcat accgtgaata gtgctgtttt tgattgtcag actattggcg ttggtattgg
     9421 tagaaatacc gtcgtccaga tagtaggtag aaatcacgcc gttaacagta gcgttattaa
     9481 tgaccgggta gatatcgccg ttgtaataac tatcagcggc atagttgttc cagcctacat
     9541 aaccatcata gtaaacgtca tcagcatagg tggcgtcgtt gtagtgatgg aaagtattgt
     9601 aagtttgacc agaaatatcg ttggtcgctg cattagcctg agaggtgata gccagagtgc
     9661 aagccaatgc taattgtgat actacaagtt tctttttcca ggagtgcatt tgtcatccct
     9721 cctcagggac gtaataagtt gatccatcaa ttatcaatgc atagaaaaca tattatgttt
     9781 cgcgctaacg attatgctgc gttacagacg aatggttcaa ttattctttc ccctaag
//
LOCUS       DAPGWB010000162         9816 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.164, whole genome shotgun sequence.
ACCESSION   DAPGWB010000162 DAPGWB010000000
VERSION     DAPGWB010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9816
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.164"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            126..341
                     /gene="bdm"
                     /locus_tag="RHX79_003865"
     CDS             126..341
                     /gene="bdm"
                     /locus_tag="RHX79_003865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310112.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm-dependent modulation protein"
                     /protein_id="HDV2198980.1"
                     /translation="MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWV
                     EASDNDILSDIYQQTINYVVSGQHPTL"
     gene            443..580
                     /gene="sra"
                     /locus_tag="RHX79_003866"
     CDS             443..580
                     /gene="sra"
                     /locus_tag="RHX79_003866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary-phase-induced ribosome-associated
                     protein"
                     /protein_id="HDV2198981.1"
                     /translation="MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAE
                     K"
     gene            737..2434
                     /gene="maeA"
                     /locus_tag="RHX79_003867"
     CDS             737..2434
                     /gene="maeA"
                     /locus_tag="RHX79_003867"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDV2198982.1"
                     /translation="MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLG
                     LLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPV
                     IYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILG
                     LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRI
                     TDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAA
                     VTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIISQTQREGLSEEAARQKVFM
                     VDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQ
                     TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVV
                     WKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLV
                     LPELKDIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI"
     gene            2568..3578
                     /gene="adhP"
                     /locus_tag="RHX79_003868"
     CDS             2568..3578
                     /gene="adhP"
                     /locus_tag="RHX79_003868"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310109.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HDV2198983.1"
                     /translation="MKAAVVTKDHHVDVTDKTLRSLKHGEALLKMECCGVCHTDLHVK
                     NGDFGDKTGVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETL
                     CRSVKNAGYSVDGGMAEECIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKIR
                     PGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLKLATEMGADLAINSRTEDA
                     AKIVQEKTGGAHAAVVTAVAKAAFNSAVDAVRAGGRVVAVGLPPESMSLDIPRLVLDG
                     IEVVGSLVGTRQDLTEAFQFAAEGKVVPKVALRPLADINTIFTEMEEGKIRGRMVIDF
                     RR"
     gene            3725..4009
                     /locus_tag="RHX79_003869"
     CDS             3725..4009
                     /locus_tag="RHX79_003869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HDV2198984.1"
                     /translation="MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTG
                     KAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ"
     gene            complement(4060..4713)
                     /gene="fdnI"
                     /locus_tag="RHX79_003870"
     CDS             complement(4060..4713)
                     /gene="fdnI"
                     /locus_tag="RHX79_003870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit gamma"
                     /protein_id="HDV2198985.1"
                     /translation="MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLT
                     QTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHK
                     VADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGI
                     ILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI"
     gene            complement(4706..5590)
                     /gene="fdnH"
                     /locus_tag="RHX79_003871"
     CDS             complement(4706..5590)
                     /gene="fdnH"
                     /locus_tag="RHX79_003871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase N subunit beta"
                     /protein_id="HDV2198986.1"
                     /translation="MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKA
                     CQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMH
                     CEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKC
                     TLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEG
                     VGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHY
                     IGIGPNKEVDDDEEDHHE"
     gene            complement(5603..8650)
                     /gene="fdnG"
                     /locus_tag="RHX79_003872"
     CDS             complement(5603..8650)
                     /gene="fdnG"
                     /locus_tag="RHX79_003872"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(8063..8065),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HDV2198987.1"
                     /translation="MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAK
                     EIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYV
                     NSENRLRYPEYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLS
                     TGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPIR
                     SGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYD
                     KSSWNYQFDENGYAKRDETLTHPRCVWNLLKEHVSRYTPDVVENICGTPKADFLKVCE
                     VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLADQVNYWSNYPKFFVSL
                     MKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDK
                     NKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDG
                     SIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNY
                     KQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYT
                     GSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLI
                     QWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETP
                     LGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIA
                     QPEQFVEISETLAAAKGINNGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGI
                     PIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA"
     gene            8882..9763
                     /gene="yddG"
                     /locus_tag="RHX79_003873"
     CDS             8882..9763
                     /gene="yddG"
                     /locus_tag="RHX79_003873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415990.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid efflux DMT transporter YddG"
                     /protein_id="HDV2198988.1"
                     /translation="MTRQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLS
                     GLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICLALSLGYAATRHQAIEVGMVNYLW
                     PSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGGDNGLHYDEIINNITTSPLSYF
                     LAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWVYYFLTPQPEMVFSTPVMIK
                     LISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLSFSFWQGA
                     LMVCGGSLLCWLATRRG"
BASE COUNT         2368 a         2571 c         2491 g         2386 t
ORIGIN      
        1 atataaaaat catcaaccag gactaatctt aacaacgaag cggcaaatat ttgccatgct
       61 gaatgtgctt tataaatctg cgatccgtag cagacaccat aaatacacag acacggagaa
      121 tcactatgtt tacttattat caggcagaaa attcaacagc agaacccgct ctggttaatg
      181 ccattgagca aggccttcgg gcagagcacg gtgttgtcac tgaagatgac attctcatgg
      241 agctgaccaa atgggtggaa gcttctgata acgacatcct cagtgatatc taccagcaaa
      301 cgatcaatta tgtggtcagt ggccagcacc ctacgcttta aggtgctatg cttgttcggc
      361 aacctaattt aggggtttag cacgtgtttc ttcgctacgg cgatgttgtc cttaaaacta
      421 gcaacaggat tgaggagtta aaatgaaatc gaaccgtcag gcacgtcata ttcttggact
      481 ggaccataaa atttctaacc agcgcaaaat agttaccgaa ggtgacaaat ccagcgtggt
      541 aaataatcca accggcagaa aacgccccgc tgaaaagtaa ttcataacca tcagtcctca
      601 atgacgatta aacaccattg cctgcgcaat ggtgtttttg tttttatctg ctctatactt
      661 ggggccgacg ccctggcggt aaagcaaaga cgataaaagc gtgccaggga tggatattca
      721 aaaaagagtg agtgacatgg aaccaaaaac aaaaaaacag cgttcgcttt atatccctta
      781 cgctggccct gtactgctgg aatttccgtt gttgaataaa ggcagtgcct tcagcatgga
      841 agaacgccgt aacttcaacc tgctggggtt actgccggaa gtggtcgaaa ccatcgaaga
      901 acaagcggaa cgagcatgga tccagtatca gggattcaaa accgaaatcg acaaacacat
      961 ctacctgcgt aacatccagg acactaacga aaccctcttc taccgtctgg taaacaatca
     1021 tcttgatgag atgatgcctg ttatttatac cccaaccgtc ggcgcagcct gtgagcgttt
     1081 ttctgagatc taccgccgtt cacgcggcgt gtttatctct taccagaacc ggcacaatat
     1141 ggacgatatt ctgcaaaacg tgccgaacca taatattaaa gtgattgtgg tgactgacgg
     1201 tgaacgtatt ctagggcttg gtgaccaggg catcggcggg atgggcattc cgatcggtaa
     1261 actgtcgctc tataccgcct gtggcggcat cagcccggcg tatacccttc cggtggtgct
     1321 ggatgtcgga acgaacaacc aacagctgct taacgatccg ctgtatatgg gctggcgtaa
     1381 tccgcgtatc actgacgacg aatactatga attcgttgat gaatttatcc aggctgtgaa
     1441 acaacgctgg ccagacgtgc tgttgcagtt tgaagacttt gctcaaaaaa atgcgatgcc
     1501 gttacttaac cgctatcgca atgaaatttg ttcttttaac gatgacattc agggcactgc
     1561 ggcggtaaca gtcggcacac tgatcgcagc aagccgcgcg gcaggtggtc agttaagcga
     1621 gaaaaaaatc gtcttccttg gcgcaggttc agcgggatgc ggcattgccg aaatgatcat
     1681 ctcccagacc cagcgtgaag gattaagcga ggaagcggcg cggcagaaag tctttatggt
     1741 cgatcgcttt ggcttgctga ccgacaagat gccgaacctg ctgcctttcc agaccaaact
     1801 ggtgcagaag cgcgaaaacc tcagtgactg ggataccgac agcgatgtgt tgtcactgct
     1861 ggatgtggtg cgcaatgtaa aaccagatat tctgattggc gtctcaggac agaccgggct
     1921 gtttacggaa gagatcattc gtgagatgca taaacactgt ccgcgtccga tcgtgatgcc
     1981 gctgtctaac ccgacgtcac gcgtggaagc cacaccgcag gacattatcg cctggaccga
     2041 aggtaacgcg ctggtcgcca ctggcagccc gtttaatcca gtggtatgga aagataaaat
     2101 ctaccctatc gcccagtgta acaacgcctt tattttcccg ggcatcggcc tgggggttat
     2161 tgcttccggc gcgtcacgta tcaccgatga gatgctgatg tcggcaagtg aaacgcttgc
     2221 tcagtattcg ccgctggtcc tgaacggcga aggtctggta ctaccggaac tgaaagatat
     2281 tcagaaagtc tcccgcgcaa ttgcgtttgc ggttggcaaa atggcgcagc agcaaggcgt
     2341 ggcggtgaaa acgtctgccg aagctctgca acaggccatt gatgataatt tctggcaagc
     2401 cgaataccgc gactaccgcc gtacctccat ctaagcctgc gcccggtagt gaaggctacc
     2461 gggctatttc tctctccctt tttcagatct catccatact gggtagtggc gaataaatct
     2521 catttgcctc acctgctatg cagaacatca tccgaaaagg aggaactatg aaggctgcag
     2581 ttgttacgaa ggatcatcac gttgacgtta cggataaaac actgcgctca ctgaaacatg
     2641 gcgaagccct gctgaaaatg gagtgttgtg gtgtatgtca taccgatctt catgttaaga
     2701 atggcgattt tggtgacaaa actggcgtaa ttctgggcca tgaaggcatc ggtgtggtgg
     2761 cagaagttgg cccaggtgtc acctcattaa aaccaggcga tcgtgccagc gtggcgtggt
     2821 tctacgaagg atgcggtcat tgcgaatact gtaacagtgg taacgaaacg ctctgccgtt
     2881 cagttaaaaa tgccggatac agcgttgatg gcgggatggc ggaagagtgc atcgtggtcg
     2941 ccgattacgc ggtaaaagtg ccagatggtc tggactcggc ggcggccagc agcattacct
     3001 gtgcgggggt caccacctac aaagccgtta aactgtcaaa aattcgtcca gggcagtgga
     3061 ttgctatcta cggtcttggc ggtctgggta acctcgctct gcaatacgcg aagaatgtct
     3121 ttaacgcgaa agtgatcgcc attgatgtca atgatgagca gttaaaactg gcaaccgaaa
     3181 tgggtgcaga tttagcgatt aactcacgca ccgaagacgc cgccaaaatt gtgcaggaga
     3241 aaaccggtgg cgctcacgct gcggtggtaa cagcagttgc taaagctgcg tttaactcgg
     3301 cagttgatgc tgtccgtgca ggcggtcgtg ttgtggctgt cggtctgccg ccggagtcta
     3361 tgagcctgga tatcccacgc cttgtgctgg atggcattga agtggtcggt tcgctggtcg
     3421 gcacgcgcca ggatctaacc gaagccttcc agtttgccgc cgaaggcaaa gtggtgccga
     3481 aagtcgccct gcgtccgtta gcggacatca acaccatctt taccgagatg gaagaaggca
     3541 aaatccgtgg ccgtatggtg attgatttcc gccgttaaga ggcctttgct gcgagtgcca
     3601 gtcctggtgt cgcagcatcg cactctctcc gacattaaat ggctaaatgg attattgttc
     3661 cttcctacgc aacaataatg atagtgttcc tgatgaagga acactactga gagtaaagac
     3721 actgatgaaa atggccaatc atccccgccc gggggacatt attcaggaat cgctggacga
     3781 acttaatgtc agcctgcgcg agtttgccag agcaatggaa attgctccct caacggcaag
     3841 ccgattgctg accggaaaag cagctttgac accagaaatg gcgattaaac tttccgtggt
     3901 gatcggcagt tcgccgcaaa tgtggctgaa tctgcaaaac gcctggagtc tggcagaggc
     3961 agaaaaaacg gtggatgtgt cgcgactacg ccgtctggtt acgcaataaa aaaatggcgc
     4021 ttcttaaagc gccattttca gcttaaagtt caaaagagat tatatccctt cttcactctc
     4081 ttttttcgct tctgccttct cgatttcacg ataccagcgc ggatggtgtt tcttcgccca
     4141 gcgacggctc accttccctt cgatcatccc tttaatcgac cctttcaccc agaatgccat
     4201 atacatatgg atcaggatgg cgtggatcag gatgataccc gcagccgcgt ggatcagcag
     4261 gctgtagcga acaacctgca tcgggaagta ctgcgcaaag tacggacgcc agataatcac
     4321 cccggtcacc agcagcacga aaatcatgct catgatcgac cagaacatca tcttttgccc
     4381 ggcgttgtac ttaccgacat ccgccacttt atgctcattg cctttcaata cttcgacaat
     4441 gttcaacagc cacggaatat ctttcttatc cgggatgttg tgatgcacaa aacgcacaaa
     4501 cataaacatc agtgcgacga aaatcgcaat gccgaaaaac gggtgcaaaa tgcgtcccat
     4561 ctgcggcgta ccgaaggttt gcgtcagcca ttgcagcgtc gggaagaaga acgaaatccc
     4621 ggacagcgcc accaggaaga agcaaatcac cacggtccag tgacaggcgc gatcaataaa
     4681 tttggtgcgc acaatcattt tcgacttact catgatgatc ctcctcgtca tcgtccactt
     4741 ccttattcgg gccaataccg atgtagtgga aaatcaaccc ggcaaaagtg gcaataaagc
     4801 cagccgctgc cagcggtttc aacgcgcctt tccacaggct taccgaggtg tcgatcttcg
     4861 gatctttcgg cagaccgtga tacagctccg gctgatcggc gtgatgcagc acgtacataa
     4921 cgtgcgtacc accgacccct tccgggttgt agacgccagc atgttcgtaa ccacgcgctt
     4981 tcagtttcgc cacgcgctgt tccgccagct ccagcatctc cttcttggtg ccgaagtgga
     5041 tagccccggt cggacaggtt ttcacacaag ccggttcctg gccgacgctg acgcgatcga
     5101 cgcagagcgt gcatttatat acccggttat cctctttgtt gaggcgcgga atattaaacg
     5161 gacacccggc aatgcagtaa ccacagccga tgcagttttc cgactggaaa tcgacaatcc
     5221 cgttagcgta ctgaatgatt gcaccagcag acgggcacgc cttcaggcag ccgggatctt
     5281 cacagtgcat acagccgtct ttacggatca gccactccag cttgccgttc tgttcggttt
     5341 cgctaaagcg catcaccgtc caggacttgg cgctcagatc ggcggggtta tcgtaaaccc
     5401 cgacgcagtg ccccacttca tcacggatgt cgttccactc cgaacacgcc acctgacagg
     5461 ctttacagcc gatacaggtg gaaacgtcga taagttttgc gacttctgct ttgtaatcac
     5521 gcacctgaga aggcggcgtg atggagttag ttgcggacct tttgataatg tcctgcgttt
     5581 ccatagccat ctgttcgccc ccttacgcct tctcgatgtt gactaagaac gctttatatt
     5641 ccggcgtttg cgagtttgca tcaccgacat tcggcgtcag agtgttagcg atataacctt
     5701 tacgcgcgac accctcaaag ccccagtgga ttggaatacc caccgtttca acctgctgac
     5761 catttacatt cagtggtttc agacgacgcg ttaccacagc caccgcgcgg ataaagccac
     5821 gcttgcttga gacagtgaca cgatcgccat tattaatgcc tttcgccgcc gccagcgttt
     5881 cgctgatttc cacaaactgt tccggctgag caattgcgtt gagcaatgcg tgcttggtcc
     5941 aggtgtggaa gtgctcggtc agacgatagg tcgtacccac atacgggaac tgctcttttt
     6001 tacccatccg cagtgcgtct tgttcataca aacgaacaac cgggttagac accacgttcg
     6061 gatgcagcgg gttagtgccc agcggcgttt caatcggctc gtagtgttcc gggaacggac
     6121 cttccgccat tttgttgatg gcaaacaggc gtcccatccc ttccggctgc atgataaacg
     6181 gcccggttgg cgtacccggt gcggcattgc cgaagtcagg aatatcgtta cccgtccact
     6241 tgctgccgtt ccactggatc agcatccgtt tcggatccca cggtttaccg ttgatatccg
     6301 ccgaagcacg gttgtacagc acgcgacggt tgagcggcca cgcccaggcc catcccagcg
     6361 tattccccag accggacggg tcggagttat cgcggttagc catctggttg ccctgctctg
     6421 tccagctacc ggtgtagatc cagcaagaag atgcggttgt accgtcatca cgcagatgcg
     6481 caaagctact cagcaactga cctttcttcg caatcagcac gccattagca tcatagagat
     6541 cttccagcgc atagccgttg ttctctttag ctacttcgtc agattgcggt tcgtgcggct
     6601 gcttgtagtt ccagctcatc ttcatcagcg gttctacgcc tttaccacct tcggcctggt
     6661 acagctcgcg caggtgatgg tagatacccg ccagaatttc accgtcgtta cgcgcttcgc
     6721 ccggcgcatc ctgacctttc cagtgccact gcagccagcg accggagtta gcaatagaac
     6781 catcttcttc agcaaagcag gtcgaaggca gacggaatac ttcagtctga atagacgccg
     6841 gatcgacatc gttcgactcg ccgtggttct gccagaaggt agaggtttca gtcaccagcg
     6901 gatcgataac caccatgtac ttcagcttgc tcaggcagct caccactttg tttttgtccg
     6961 ggaaggacgc aaccgggtta aagccctggc agaaataacc ggtgactttg ccttcgtcca
     7021 tcatgttgaa atacttgatg acgtcgtagg tctggtccca cttcggcagc cagtcatagc
     7081 cccagttgtt ctctttctgc gcggcatcgc catagaaaga tttcatcagg ctaacgaaga
     7141 acttcggata gttgctccag tagttcacct gatcagccag cgtcgctttc ggcgtgttcg
     7201 cttccagata cgactgcaaa tcaacctgtt tttctgacgg cagcgtcaga taacctggca
     7261 ggctggtaga gagcagacct aagtcagtca ggccctgaat gttggagtga ccacgcaatg
     7321 cgttcacgcc gccaccggcc atacccatgt taccgagcag taactggatc atcgccatag
     7381 tacggatgtt ctgcgcaccc acggtgtgct gcgtccagcc cagcgcgtac aggaaggtgg
     7441 ttgtgcgatc cggtgcgctg gtggaggcca gcacttcaca cactttcagg aagtcggctt
     7501 ttggcgtacc gcagatgttt tcaacgacgt ccggcgtgta gcgggaaacg tgctctttca
     7561 gcaggttcca cacacagcgc ggatgagtca gtgtttcatc gcgtttcgca tagccgtttt
     7621 catcgaactg atagttccag gacgatttgt cgtactggcg tttttcagcg tcataaccgc
     7681 tgaacaggcc atcttcgaaa gcaaaatcat cacgcaccag caggctggcg ttggtgtaat
     7741 gtttaacgta ttcggcgttg attttgttgt tttcgatcag gtagcgcaaa acgccagaca
     7801 ggaacgtaat gtccgtaccg gaacgaatag gtgcgtaaat atccgccaca gaagcggtac
     7861 gcgtaaaacg aggatcgaca acgatcaagg ttgcatcgtt gttgtttttc gcttccatcg
     7921 cccagcggaa accgacggga tgcgcttcag cagcgttacc gcccattacc attacgacgt
     7981 tagcgttttt gatatccacc cagtggttgg tcatcgcacc gcgaccaaat gttggagcaa
     8041 gacttgctac cgttggtccg tgtcagacgc gcgcctggtt gtctaccgcc agcatcccga
     8101 gggagcgggc aaatttctgt gtcagcatcc cggtttcgtt gctggcaccg gaggcacaca
     8161 gcataccggt agaaagccaa cggtttaccg ttacgccctg ctcgttcttt tcaataaagt
     8221 tagcgtcacg gtcagctttc atcagctttg caatacggga gaatgcttct tcccagctaa
     8281 tgcgctgcca tttgtcagaa cctggcgcac gatattccgg gtagcgcaga cggttttcgc
     8341 tgttgacgta atccagcaaa ccggcccctt ttgggcacag cgcaccacgg cttaccggat
     8401 gatccgggtc accttcaatg tgataaatcg cttctctggc gtttttcgcg ccatcaccca
     8461 ggctatacat caatagcccg caacctacgg aacagtatgt gcaggtgtta cggatctctt
     8521 tagcgcgtaa taatttgtag tttcgcgcct gagccagtgc ttgcttcggg gcaaagccca
     8581 atgccgctac cgttgttcca gccataccgc ccgcgcagat tttaaaaaat tgtctgcgac
     8641 tgacgtccat tgctttcctc ttttttcagg ggtattactg cgcgaggaaa ctaacagtaa
     8701 aattctgaat ctttttgcgc gaaatcaaaa agaacacgtg tttgccacaa aataatccgc
     8761 ctgcgcaaat tgacctacct caatagcggt agaaaaacgc accactgcct gacaggccag
     8821 ttaaaaaaat gctataaaat tcagcttaat ttttaacggc aagagagaca aaacagcgag
     8881 catgacacga caaaaagcaa cgctcatagg gctaatagcg atcgtcctgt ggagcacgat
     8941 ggtaggattg attcgcggtg tcagcgaggg gctcggcccg gtcggcggcg cagctgctat
     9001 ctattcatta agcgggctgc tgttaatctt cacggttgga tttccgcgta ttcggcagat
     9061 tccgaaaggc tatttactcg ccgggagtct gttattcgtc agctatgaaa tctgtctggc
     9121 gctttcctta gggtatgcgg cgacccgtca tcaggcgatt gaagtgggta tggtgaacta
     9181 tctatggccc agcctgacaa ttctctttgc cattctgttt aatggtcaga aaaccaactg
     9241 gctgattgta ccaggattat tattagccct ggtcggcgtc tgctgggtgt taggcggtga
     9301 taatgggtta cattatgatg aaatcatcaa taatattacc accagcccat tgagttattt
     9361 cctggcgttt attggtgcgt ttatctgggc agcctattgc acagtaacga ataaatacgc
     9421 acgcggattt aacggaatta ccgtttttgt cctgctaacg ggagcaagtc tgtgggttta
     9481 ctattttctc acgccacaac cagaaatggt atttagcacg cccgtcatga ttaaactcat
     9541 ctctgcggca tttaccttag gatttgctta tgctgcatgg aatgtcggta tactgcatgg
     9601 caatgtcacc ataatggcgg taggctcgta ttttacgccc gtactttcct cagcgcttgc
     9661 agccgtgctg ctcagcgccc cgctgtcgtt ctcattctgg caaggcgcgc taatggtctg
     9721 cggcggttcc ctgctctgct ggctggcgac acgtcgtggt taaaataatt gccgggtcta
     9781 cggcccggca gttaatcaga taaattccga caatat
//
LOCUS       DAPGWB010000163         9762 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.165, whole genome shotgun sequence.
ACCESSION   DAPGWB010000163 DAPGWB010000000
VERSION     DAPGWB010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9762)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9762)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9762
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.165"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..203
                     /gene="traQ"
                     /locus_tag="RHX79_003874"
     CDS             <1..203
                     /gene="traQ"
                     /locus_tag="RHX79_003874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001617873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     chaperone TraQ"
                     /protein_id="HDV2198989.1"
                     /translation="VARLVYSKPWMAFFLAELIAAILVLFGAYQVLDAWIARVSLEER
                     EALEARQQAMMEGQQEGGHVSH"
     gene            190..735
                     /gene="trbB"
                     /locus_tag="RHX79_003875"
     CDS             190..735
                     /gene="trbB"
                     /locus_tag="RHX79_003875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000052622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly thiol-disulfide isomerase TrbB"
                     /protein_id="HDV2198990.1"
                     /translation="MSLTKLLPVILLMMATGVQASTRDEIERLWNPQGMAVQPAQPAA
                     DTSARTEKPAPRWFRLSNGRQVNLADWKVVLFMQGHCPYCHQFDPVLKQLAQQYGFSV
                     FPYTLDGQGDTAFPEALPVPPDVMQTFFPNIPVATPTTFLVNVNTLEALPLLQGATDA
                     ASFMARMDTVLQMYGEEKGTK"
     gene            665..1012
                     /gene="trbJ"
                     /locus_tag="RHX79_003876"
     CDS             665..1012
                     /gene="trbJ"
                     /locus_tag="RHX79_003876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001444236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbJ"
                     /protein_id="HDV2198991.1"
                     /translation="MPPVLWRGWIPFCRCTERKKVRNKQVVLLIAGISGIATGIIVSL
                     NIPFIRQGLFYPASPVEIVVSLCLTFSVSVVFFVGAIVGWISVSEIYYSRMNGLNESS
                     EISEETYNERKKK"
     gene            960..1385
                     /gene="trbF"
                     /locus_tag="RHX79_003877"
     CDS             960..1385
                     /gene="trbF"
                     /locus_tag="RHX79_003877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001323332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F-type conjugal transfer protein TrbF"
                     /protein_id="HDV2198992.1"
                     /translation="MNHRKYQRKLIMKEKRNDAELKNRKTKRDYDYERRVSDIYFDLF
                     FVFVAAGTFLWVIMHSIFDACIDSWKADPELNNFRYMWNILMYVIPYTLWAFAGGFLI
                     VYVRNPLNELINGGIRIFRLKRRMRREKKLREGGNNASH"
     gene            1372..2745
                     /locus_tag="RHX79_003878"
     CDS             1372..2745
                     /locus_tag="RHX79_003878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001137361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraH"
                     /protein_id="HDV2198993.1"
                     /translation="MLRIKPLLVLCAALLTVTPAASADVNSDMNQFFNKLGFASNTTQ
                     PGVWQGQAAGYAYGGSLYARTQVKNIQLISMTLPDINAGCGGIDAYLGSFSFINGDQL
                     QRFVKQIMSNAAGYFFDLALQATVPEIKTAKDFLQKMASDINSMNLSSCQVAQGIVGG
                     LFPQTQVSQQKVCQDIAGESNIFADWAASRQGCTVGGQSSSVRDKASDKDKERVLKNI
                     NIIWDSLSKNRMLDGNKELKEFIMTLTGTLIFGEDSEITPLPARTTDRDILRAIMEGG
                     TAKVYHCNDSDKCLKVVADANVTIARDKALKSQITKLLTSIQNKAVSDTPLDDREKGF
                     ISSTTVPVFKYLIDPQMLGVSSSVVYQLTDYIGYDIMLQYIQELLQQARAMIATGNYP
                     QTVLDSVLENLNQAQQQIAVFQGQVKVQQDALLVVDRQMSYMRQQLSARMLSRYQNNY
                     HFGGSTL"
     gene            2742..5564
                     /gene="traG"
                     /locus_tag="RHX79_003879"
     CDS             2742..5564
                     /gene="traG"
                     /locus_tag="RHX79_003879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer mating pair stabilization
                     protein TraG"
                     /protein_id="HDV2198994.1"
                     /translation="MNEVYVIAGGEWLRNNLNAIAAFMGTRTWDSIEKIALTLSVLAV
                     AVMWVQRHNVMDLLGWVAVFVLISLLVNVRTSVQIIDNSDLVQVHRVDNVPVGLAMPL
                     SLTTRIGHAMVASYEMIFTQPDSATYSKTGMLFGANLIVKSTDFLSRNPEIINLFQDY
                     VQNCVLGDIYLNHKYTLEDLMASADPYTLIFSRPSPLRGVYDSNNNFITCKDASVTLK
                     DRLNLDTKTGGKTWHYYVQQIFGGRPDPDLLFRQLVSDSYSYFYGSSQSASHIMRQNV
                     TMNALKEGITSNAARNGDTASLVSLATTSSMEKQRLAHVSIGHVLMRNLPMVQTILVG
                     ITIGIFPLLVLAAVFNRLTLSVLRGYVFALMWFQTWPLLYAILNSAMTFYAKQNGAPV
                     VLSELSQIQLKYSDLASTAGYISVMIPPLSWMMVKGLGAGFSSVYSHFASSAISPTAS
                     AAGSVVDGNYSYGNMQTENVNGFSWSTNSTTSFGQMMYQTGSGATATQTRDGNMVMDA
                     SGAMSRLPVGINATRQIAAAQQEMAREASNRAESALHGFSSSIASAWNSLSQFGSNRG
                     SSDSVTGGADSTMSAQDSMMASRMRSAVESYAKAHNISNEQATQELASRSTRASAGMY
                     GDAHAEWGVKPKILGVGGGLGVRGGGRAGIDWEDNDAHTASSNTQSSHNARHDIDARA
                     TQDFKEASDYFTSRKVSESGSHTDNNADSRVDQLSAALNSAKQSYDQYTTNMTRSHEY
                     AEMASRTESMSGQMSEDLSQQFAQYVMKHAPQDAEAILTNTSSPEIAERRRAMAWSFV
                     QEQVQPGVDNAWRESRGDIGKGMESVPSGGGSQDIIADHQGHQAIIDQRTQDSNIRND
                     VKHQVDNMVTEYKGNIGDTQNSVRGEENIVRGQYSELQNHHKTEALSQNNKYNEEKSA
                     QERMPGADSPQELMKRAKEYQDKYKQ"
     gene            5580..6065
                     /locus_tag="RHX79_003880"
     CDS             5580..6065
                     /locus_tag="RHX79_003880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000605512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface exclusion protein"
                     /protein_id="HDV2198995.1"
                     /translation="MIMRCLTHITLVTVIQFIACYLASWGNAETIFMLFFIVLWQGLF
                     IWLFSQIRKKRNVSDEFKFSKGVWYITMPVSSLLSPLLSLMVFIIGTLYELRRVSGCV
                     SVREWMQSQVNEQTNEDLHLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYD
                     E"
     gene            6114..6845
                     /locus_tag="RHX79_003881"
     CDS             6114..6845
                     /locus_tag="RHX79_003881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000850426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement resistance protein TraT"
                     /protein_id="HDV2198996.1"
                     /translation="MKMKKLMMVALVSSTLALSGCGAMSTAIKKRNLEVKTQMSETIW
                     LEPASERTVFLQIKNTSDKDMSGLQGKIADAVKAKGYQVVTSPDKAYYWIQANVLKAD
                     KMDLRESQGWLNRGYEGAAVGAALGAGITGYNSNSAGATLGVGLAAGLVGMAADAMVE
                     DVNYTMITDVQIAERTKATVTTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNAN
                     KVNLKFEEAKPVLEDQLAKSIANIL"
     gene            7048..7785
                     /locus_tag="RHX79_003882"
     CDS             7048..7785
                     /locus_tag="RHX79_003882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2198997.1"
                     /translation="MTSDNIAEYVGENNQFTEKPVTEYPPVIQDNTVTTKDYLYSNNI
                     DTDLLVVIGGLIVILFLMMLIMYFINSLRHKELTEILTKISFPEKSGSNLLKPEAVSC
                     NLLSLCVLAPVFCTPRKLAEVSREIIVASAQEIAWTPGSSRIDGHQAENITWAISSQS
                     PADKYDLINKTSCVSPDSGRFYEPDTVLDHRERVRLFIQIQFPHGSDWSEVLRLTDIV
                     TEKVSSGRTAGGHHHRHTGYTWSVSVN"
     gene            7836..>9762
                     /gene="traD"
                     /locus_tag="RHX79_003883"
     CDS             7836..>9762
                     /gene="traD"
                     /locus_tag="RHX79_003883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000009331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="HDV2198998.1"
                     /translation="MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILIGLV
                     LWVKISWQTFINGCIYWWCTSLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMI
                     WCGEQLWSAFVLASVVALVICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVA
                     RMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVI
                     YDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDP
                     FWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIE
                     KTAISIRAVLTNYVKAIRYLQGIEHNGDPFTIRDWMRGVREDQKNGWLFISSNADTHA
                     SLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY
                     VFGIQSYAQLEDIYGEKAAATLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ
                     YSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQARP
                     KVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPEVASGEDVTQAEQPQQPQQ
                     PQQPVSSVINDKKSDAGV"
BASE COUNT         2465 a         2230 c         2635 g         2432 t
ORIGIN      
        1 tcgtcgcccg tcttgtttac agcaaaccct ggatggcttt ttttctggcg gagttgattg
       61 cggccatcct tgtgctgttc ggcgcatacc aggtgctgga tgcatggatt gcacgtgtca
      121 gcctggaaga gcgtgaggca ctggaagcca ggcaacaggc catgatggaa gggcagcagg
      181 agggcggaca tgtctctcac taaattactg ccggtcattt tgttgatgat ggccacaggt
      241 gtgcaggcct ccacccggga tgaaattgaa cgactctgga atccgcaggg tatggccgtg
      301 cagcctgcac aaccggcagc agacacatca gccagaacag aaaagccggc tccccgctgg
      361 ttccgcctca gcaacggcag gcaggttaac ctggccgact ggaaggtggt gctgtttatg
      421 caggggcatt gcccttactg tcaccagttt gacccggtac tgaaacagct ggcacagcag
      481 tacggctttt ccgtttttcc ctacaccctg gatggtcagg gggataccgc ctttccggaa
      541 gcattaccgg tgccaccgga cgtgatgcag accttcttcc cgaatatccc ggtggccaca
      601 ccgactacct tcctggtcaa cgtcaacaca cttgaggcat taccgctttt gcagggggca
      661 acggatgccg ccagttttat ggcgcggatg gataccgttc tgcagatgta cggagaggaa
      721 aaaggtacga aataagcagg tggtgttact cattgccgga atatccggca tcgcgacggg
      781 aataatcgtc agcctgaata tcccctttat ccgtcagggg cttttttatc ccgccagccc
      841 tgtggaaatt gtcgtttcgc tgtgtcttac cttttctgtt tctgttgtgt tttttgtggg
      901 ggcaattgtg ggatggattt cggtgtctga aatatattac agccgcatga acggtctgaa
      961 tgaatcatcg gaaatatcag aggaaactta taatgaaaga aaaaagaaat gatgcggaac
     1021 taaaaaacag aaaaactaaa cgggattatg attatgaacg cagggtttct gatatatatt
     1081 ttgatctgtt ttttgtgttc gttgctgccg gaactttttt atgggtgatt atgcatagta
     1141 tttttgatgc ctgtattgat tcgtggaaag ctgacccgga attaaataat tttcgttata
     1201 tgtggaacat cctgatgtat gtcattccgt atacgttatg ggcgtttgca ggtggatttc
     1261 ttatcgtata cgtcaggaac cctttaaatg aattaataaa cggggggatc agaatattcc
     1321 ggctgaaacg ccgtatgcgc cgggagaaga aattaaggga gggtggcaat aatgcttcgc
     1381 attaaacctc ttctggttct ttgtgccgct ttactgacgg tcacacccgc agcgtcagcg
     1441 gatgtgaaca gcgacatgaa tcagttcttt aataagctgg gatttgcttc caataccaca
     1501 caaccgggcg tctggcaggg gcaggccgcc gggtatgcct atggtggctc cctgtatgcc
     1561 cgcacccagg tcaaaaatat ccagctgatt tccatgacgc tgccggatat caatgccgga
     1621 tgtggcggca tcgacgccta tctcggctcg ttcagtttta ttaatggcga tcagttgcag
     1681 cgttttgtta agcagattat gagcaacgct gccggttact tttttgacct tgccctgcag
     1741 gcaacggtgc cggaaatcaa aaccgcaaaa gacttcctgc agaaaatggc aagcgacatt
     1801 aacagtatga acctcagctc ctgtcaggtg gcgcagggga ttgtcggagg attatttcct
     1861 cagactcagg tgtcacagca gaaggtctgt caggacattg ccggtgagag caatattttt
     1921 gctgactggg ccgcgtcccg tcagggctgc acggtcggag gacagtcatc gtctgttcgt
     1981 gacaaggcca gtgacaaaga taaggaacgg gtgctgaaga acatcaatat catctgggac
     2041 tcgctgtcca aaaacaggat gcttgatggt aacaaagaac tgaaagaatt tattatgacg
     2101 ctcaccggta cgctgatttt tggggaagac agcgagatta cccccctgcc ggcgcgtacc
     2161 actgaccgcg atatcctccg ggcgattatg gaggggggaa cggcaaaagt ttatcactgc
     2221 aacgattcgg acaagtgtct gaaggtggtg gcggatgcaa atgtgaccat cgcccgggat
     2281 aaagccctga aatcacagat tacaaaactg ctcaccagta ttcagaataa agcggtgagt
     2341 gatactccac tggatgacag ggaaaaaggc ttcatttcca gcaccaccgt ccccgtcttt
     2401 aaatatctta ttgacccgca gatgctcggt gtatccagca gcgtggttta ccagctgacg
     2461 gactatatcg gctacgacat catgctccag tacattcagg aactgcttca gcaggcccgg
     2521 gccatgattg ccaccgggaa ctatccacag accgtgctgg acagtgtgct ggagaatctg
     2581 aatcaggcac agcaacagat tgcggttttc caggggcagg taaaggtcca gcaggatgca
     2641 ttgctggttg ttgaccgtca gatgagctat atgcgccagc agctttccgc ccgcatgctc
     2701 agccgttacc agaacaacta tcacttcgga gggagcacgc tgtgaatgaa gtctatgtga
     2761 ttgccggtgg tgagtggtta cgcaataacc tgaacgccat tgccgccttt atggggaccc
     2821 ggacgtggga ttccatcgaa aaaattgcgc tcacattgtc tgttctcgcg gtggccgtga
     2881 tgtgggtaca gcggcacaac gtgatggatt tgctgggctg ggtggccgtg tttgtgctta
     2941 tcagcctgct ggttaatgtc cgtacatcgg tgcagattat tgataacagt gacctggtcc
     3001 aggttcaccg ggtggataat gtgcctgtcg gactggcgat gccactttca ctgacgaccc
     3061 gtatcgggca tgcaatggtg gccagttacg agatgatatt cacccagcct gacagcgcca
     3121 cctacagcaa gacaggcatg ctgttcgggg cgaacctgat tgtgaaaagc accgattttc
     3181 tgtcccggaa tccggaaatc atcaatctgt ttcaggacta cgtccagaac tgcgtgctgg
     3241 gggatattta cctgaaccac aaatacacgc tggaagacct gatggcctcc gctgacccct
     3301 acacgctgat tttttcccgg cccagcccgc tacggggcgt ttatgacagc aataataatt
     3361 tcataacctg taaagatgcg tcggtcacgc tgaaagacag gctgaatctc gatacaaaga
     3421 cgggaggcaa gacctggcat tattatgtgc agcagatatt tggcggcaga ccggacccgg
     3481 acctgttatt caggcaactg gtgagtgaca gttacagtta tttctacggc tccagccagt
     3541 ctgccagtca tattatgcgc cagaacgtca ccatgaatgc cctgaaagag ggtatcacca
     3601 gtaatgcagc ccgtaacggt gataccgcca gcctggtcag tctggccacg acttcgtcga
     3661 tggagaaaca gcgtctggca catgtctcca ttggtcatgt gctgatgcga aacctgccga
     3721 tggtgcagac cattctggtg ggcattacca ttggtatctt cccgctcctg gtactggcgg
     3781 ctgtcttcaa cagactgacg ctgtctgttc tgagaggcta tgtgtttgct ctgatgtggt
     3841 tccagacctg gccgttgctg tatgccattc tgaacagtgc catgacattc tatgcaaagc
     3901 agaatggtgc accggtcgtg ctctctgaac tctctcagat acagctgaaa tactccgacc
     3961 tggcgtccac tgccggatat atatctgtca tgataccccc gttgtcatgg atgatggtaa
     4021 aaggccttgg cgcaggtttt tccagcgtgt acagccattt cgcttcctct gctatcagcc
     4081 cgactgccag tgcggcaggt agtgtggttg acggtaatta ctcctacggc aacatgcaga
     4141 cggaaaacgt gaacggcttc agctggagca ccaacagcac cacgtcgttt ggtcagatga
     4201 tgtaccagac cggcagtggc gcaactgcca cacagacccg tgacggtaat atggtgatgg
     4261 atgcgagcgg ggcgatgtcc cggttaccgg tcggtatcaa tgcaacgcgt cagattgcag
     4321 cggcacaaca ggaaatggcc cgggaggcgt cgaacagagc agaaagcgcc ctgcatgggt
     4381 tcagcagcag tattgccagt gcctggaact cgctcagcca gtttggttct aaccggggga
     4441 gcagtgattc tgtcacaggt ggtgctgaca gcacgatgag cgcacaggac tccatgatgg
     4501 ccagccgtat gcgcagtgca gtggaaagct atgcgaaggc gcataatatc agtaatgagc
     4561 aggcgactca ggaactggca tccagaagta cgagagcttc tgccgggatg tatggagatg
     4621 ctcatgctga atggggggtt aaacctaaaa ttcttggtgt tggtggagga ttaggcgtta
     4681 gaggtggtgg tcgggctggt attgattggg aagataatga tgcgcatacg gcaagtagta
     4741 atactcagtc gagccataat gctcgtcatg atatcgatgc cagagctaca caagacttta
     4801 aagaggccag cgattatttt accagtcgca aggtcagtga gtccggcagc catacggaca
     4861 ataatgctga ttcccgtgtg gatcagttgt ctgcagccct gaattcagcg aagcagagtt
     4921 acgaccagta cacgacgaat atgacccgca gccatgaata tgctgaaatg gcatcccgta
     4981 ctgaaagcat gagtgggcag atgagtgaag acctgtcgca acagtttgca cagtatgtaa
     5041 tgaaacacgc gccacaggat gcagaagcta ttctgacaaa caccagttca ccggagattg
     5101 cagaacgtcg tcgggcgatg gcctggtctt ttgtgcagga acaggtacag cctggtgttg
     5161 ataatgcctg gcgggaatcc cgtggtgata ttggtaaagg aatggagagc gtaccttcgg
     5221 gtggtggcag tcaggatatt attgctgacc atcaggggca tcaggccatt attgatcaaa
     5281 gaacgcagga cagtaatatc cgtaatgatg taaaacatca ggttgataat atggtcacag
     5341 aatataaagg gaatataggt gatactcaga acagcgtacg tggcgaggaa aatattgtaa
     5401 gaggacagta ttctgaactg cagaatcacc ataaaacaga ggcattatct cagaataata
     5461 aatataatga agaaaagtcg gctcaggaaa gaatgcccgg ggctgacagt ccacaggaac
     5521 tgatgaaaag ggcaaaggaa tatcaggata agtataagca ataatgctgt ttttgggaga
     5581 tgataatgag atgtttaacc catattactc tggtaacggt gatacagttt atcgcctgtt
     5641 atctggctag ttgggggaat gccgaaacaa tttttatgct gttcttcata gtactatggc
     5701 agggactgtt tatatggttg ttctctcaaa tacgaaaaaa acggaatgtg tcggatgagt
     5761 ttaagtttag taaaggcgtt tggtatataa cgatgccagt atcttcctta ctctctccat
     5821 tattaagcct gatggttttt atcattggta cactatacga attaaggcga gttagtggtt
     5881 gtgtaagcgt aagagaatgg atgcaatctc aggtaaatga acaaactaat gaagatttgc
     5941 atctggattt tgataatatg gattttcatc gtactaatcc tgcaacaggg ttacctatgt
     6001 caggtattgg tgtggatatc ggtggtaatt catatggtta tagttcaaaa cgatatgatg
     6061 agtgaatctt aatttgtata ttatgacgtt ttattcaata tgaaggaaca ttgatgaaaa
     6121 tgaaaaaatt gatgatggtt gcactggtca gttccactct ggccctttca gggtgtggtg
     6181 cgatgagcac agcaatcaag aagcgtaacc ttgaggtgaa gactcagatg agtgagacca
     6241 tctggcttga acccgccagc gaacgcacgg tatttctgca gatcaaaaac acgtctgata
     6301 aagacatgag tgggctgcag ggcaaaattg ctgatgctgt gaaagcaaaa ggatatcagg
     6361 tggtgacttc tccggataaa gcctactact ggattcaggc gaatgtgctg aaggccgata
     6421 agatggatct gcgggagtct cagggatggc tgaaccgtgg ttatgaaggc gcagcagttg
     6481 gtgcagcgtt aggtgccggt attaccggct ataactcaaa ttctgccggt gccacactcg
     6541 gtgtaggcct tgctgctggt ctggtgggta tggctgcaga tgcgatggtg gaagatgtga
     6601 actataccat gatcacggat gtacagattg cagagcgtac taaggcaacg gtgacaacgg
     6661 ataatgttgc cgccctgcgt cagggcacat caggtgcgaa aattcagacc agtactgaaa
     6721 caggtaacca gcataaatac cagacccgtg tggtttcaaa tgcgaacaag gttaacctga
     6781 aatttgaaga ggcgaagcct gttctcgaag accaactggc caaatcaatc gcaaatattc
     6841 tctgaacctc gtcaggaggc tgatctgacc ggcctccttg ctgacgcctc gcgttgctcg
     6901 ttgtccaacc ccgggatgta acaaaataaa ttttgtcacc tcccggcgtt tccgaaataa
     6961 atatgaaaac actgagcggt tgtgcaaatt ctttgtgcga ccgtgaagtg ttgccggcga
     7021 agccgggatc ttccggagaa agtcattatg acatcagaca atatcgctga atatgttggt
     7081 gagaataatc aatttactga gaagcctgta actgaatacc ccccggtgat acaggataat
     7141 acagtgacca ctaaagacta tctgtacagc aataatattg atactgacct tttagtggtt
     7201 atcggagggc ttattgttat attgtttctc atgatgctta tcatgtactt tattaattct
     7261 ctcaggcata aggaattaac tgaaatactg acaaaaatat cttttcctga aaaatccggg
     7321 agcaatttgc ttaaaccgga ggcggtcagc tgtaatttgt tgtccctgtg tgtgctggca
     7381 ccggtattct gtacacccag aaagctggct gaagtttcca gggagatcat cgtggcgagt
     7441 gcgcaggaaa ttgcatggac gccggggagc agtcgtattg atggccacca ggcggagaat
     7501 atcacctggg cgatttcatc gcagtctcct gccgataagt atgatctcat caataaaacg
     7561 tcctgtgttt ctcctgacag tggccgtttt tatgaaccgg acacagttct ggatcaccgt
     7621 gaacgggtac gcctttttat tcagatccag tttccgcatg ggagtgactg gtctgaagta
     7681 ttgcgcctga ctgacattgt tacagagaag gtctcttccg gcaggactgc aggcgggcat
     7741 caccaccggc atacagggta cacctggtct gtttctgtga attaacccca catcatcctt
     7801 ttctgccctg ttccagattt tcccggagtt tcatcatgag ttttaacgca aaggatatga
     7861 cccagggcgg tcagattgcg tccatgcgta tccgcatgtt cagccagatc gccaatatca
     7921 tgctttactg cctgtttatt tttttctgga tcctcattgg tctggtctta tgggtaaaaa
     7981 taagctggca gacgtttatc aacggctgta tttactggtg gtgtacgtca ctggaaggca
     8041 tgcgggattt aataaaatcc cagccggtct atgagatcca gtattacggc aaaaccttcc
     8101 ggatgaacgc tgcccaggta ctgcatgata aatatatgat ctggtgcgga gagcagctat
     8161 ggtctgcatt cgttctggcg tctgtcgtgg ccctggttat ttgcctgatc accttctttg
     8221 ttgtctcctg gattctgggg cgtcagggta aacaacagag cgaaaatgaa gtcacaggtg
     8281 gtcgtcagct gacagacaat ccgaaagacg ttgcccggat gctgaaaaaa gacggcaagg
     8341 actccgatat ccggattggc gacctgccga ttatccggga ttccgaaatc cagaacttct
     8401 gtctgcacgg cacggtcggg gccggtaagt cggaggttat ccgtcgtctg gccaactatg
     8461 cccgtcagcg cggtgatatg gtggtgattt atgaccgttc aggggaattt gttaaaagtt
     8521 actatgatcc ctccatcgat aaaatcctga atccgctgga tgcccgctgt gccgcatggg
     8581 atttgtggaa ggagtgcctg acacagccgg attttgataa taccgcgaac acgctgatcc
     8641 ctatgggtac aaaagaggac ccgttctggc agggttcagg acgtaccatt tttgcggaag
     8701 cggcgtacct gatgcgtaat gaccccaacc gcagctacag caaactggtg gacacactgc
     8761 tttccatcaa aattgaaaaa ctgcgtacct tcctgcgtaa ttcaccggcg gccaacctgg
     8821 tggaagagaa aattgagaaa acggcgattt ccatccgtgc tgtgctgacc aactacgtga
     8881 aagccatccg ttacctgcag gggattgagc ataacggtga tcccttcacc atccgtgact
     8941 ggatgcgtgg tgtccgggaa gatcagaaaa acggctggct gtttatttcg tcgaacgccg
     9001 acacccatgc ctccctgaag cctgtgatct ccatgtggct gtccattgcc attcgtggtc
     9061 tgctggcaat gggagaaaac cgtaaccgtc gtgtgtggtt tttctgtgat gagttaccca
     9121 cgttacacaa actgccggat ctggtggaga tcctgccgga agcccgtaag ttcggtggct
     9181 gttatgtgtt tggtatccag tcctatgccc agctggaaga tatctacggt gagaaagcgg
     9241 cggccacgct gtttgacgtc atgaacaccc gtgctttttt ccgttccccg agccataaga
     9301 ttgcagagtt cgctgccggt gagattggtg agaaagagca cctgaaagcc agcgagcagt
     9361 attcctacgg tgctgacccg gtacgtgacg gggtatcgac cggtaaggat atggagcgtc
     9421 agacgctggt cagttattcc gacattcagt ctctgccgga tctgacctgc tatgtcactc
     9481 tgcccggacc gtatccggca gtcaaactct ctctgaaata tcaggcacga ccgaaggtcg
     9541 ctccggagtt tattccgcgt gacatcaacc cggaaatgga gaaccgtctg agtgccgtac
     9601 ttgccgcaag ggaagcagaa ggtcgtcaga tggccagcct ctttgaaccg gaggttgcct
     9661 ccggagaaga tgtgactcag gctgaacagc cacaacagcc acaacagcca caacagccag
     9721 tgtcttctgt catcaatgat aagaagtcag atgcaggtgt ga
//
LOCUS       DAPGWB010000164         9737 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.166, whole genome shotgun sequence.
ACCESSION   DAPGWB010000164 DAPGWB010000000
VERSION     DAPGWB010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9737
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.166"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(233..991)
                     /locus_tag="RHX79_003884"
     CDS             complement(233..991)
                     /locus_tag="RHX79_003884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDV2198999.1"
                     /translation="MSQILLQPANAMITLENVNKWYGQFHVLKNINLTVQPGERIVLC
                     GPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPH
                     LTVLQNCTLAPIWVRKMPKKEAEALAMHYLERVRIAEHAHKFPGQISGGQQQRVAIAR
                     SLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVI
                     FMDRGEIVEQAAPDEFFTHPKSERTRAFLSQVIH"
     gene            complement(999..2102)
                     /locus_tag="RHX79_003885"
     CDS             complement(999..2102)
                     /locus_tag="RHX79_003885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709065.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV2199000.1"
                     /translation="MTKVLLSQPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWL
                     MWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINL
                     ALLIGLVSIAPMFWKILPHRGRYIAVWAVIYPLIVWWLMYGGFFGLERVETRQWGGLT
                     LTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVML
                     PLFMAEGTNIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ
                     GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPTWLGMSTEG
                     YVFAALIYWIFCFSMSRYSQHLEKRFNTGRTPH"
     gene            complement(2112..3293)
                     /locus_tag="RHX79_003886"
     CDS             complement(2112..3293)
                     /locus_tag="RHX79_003886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV2199001.1"
                     /translation="MSHRRSTVKGSLSFANPTVRAWLFQILAVVAVVGIVGWLFHNTV
                     TNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVFA
                     SVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSA
                     FDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWP
                     IAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFI
                     AEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSS
                     LAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVE
                     R"
     gene            complement(3361..4386)
                     /locus_tag="RHX79_003887"
     CDS             complement(3361..4386)
                     /locus_tag="RHX79_003887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV2199002.1"
                     /translation="MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDG
                     LPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLS
                     RNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELN
                     VADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL
                     PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH
                     LLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI
                     QYAPPVR"
     gene            complement(4817..5038)
                     /locus_tag="RHX79_003888"
     CDS             complement(4817..5038)
                     /locus_tag="RHX79_003888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199003.1"
                     /translation="MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTT
                     QDNWETAGAIAGGAAAVAGLTMGIIALSK"
     gene            complement(5291..8395)
                     /gene="acrF"
                     /locus_tag="RHX79_003889"
     CDS             complement(5291..8395)
                     /gene="acrF"
                     /locus_tag="RHX79_003889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit AcrF"
                     /protein_id="HDV2199004.1"
                     /translation="MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVS
                     VSANYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDI
                     AQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSYLMVAGFVSDNPDTTQDDISDYVAS
                     NVKDTLSRLNGVGDVQLFGAQYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQ
                     LGGTPALPGQQLNASIIAQTRLKNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYN
                     VIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQ
                     LSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTFAILAAFGYSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMMEDKLPPKEATEKSMSQIQGALVGIAMVLS
                     AVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHENK
                     GGFFGWFNTTFDHSVNHYTNSVGKILGSTGRYLLVYALIVAGMVVLFLRLPSSFLPEE
                     DQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKNEKANVESVFTVNGFSFSGQAQNAG
                     MAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDGFVIPFNMPAIVELGTATGFDFE
                     LIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGLEDTAQFKLEVDQEKAQALGV
                     SLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRMLPEDVDKLYVRSANGEMV
                     PFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGY
                     DWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLA
                     ATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVVEATLMAVRMRLR
                     PILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFFVPVFFVVIRR
                     CFKG"
     gene            complement(8407..9564)
                     /gene="acrE"
                     /locus_tag="RHX79_003890"
     CDS             complement(8407..9564)
                     /gene="acrE"
                     /locus_tag="RHX79_003890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrE"
                     /protein_id="HDV2199005.1"
                     /translation="MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIV
                     KTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQA
                     NYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAK
                     ATVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQS
                     SNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLR
                     AVFPNPQHTLLPGMFVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEAR
                     PVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK"
BASE COUNT         2592 a         2529 c         2330 g         2286 t
ORIGIN      
        1 catcaaataa aacataaggc tcagtcggaa gactgggcct tatgttttat ttgatgtttg
       61 tcggtgaaca ctctcccaac caggacaaat ccgccgggaa cggatttgaa cgttgcgaag
      121 caacggcccg gagggtggcg ggcaggacgc ccgccataaa ctgccagaca tcaaatcaag
      181 caaaaaggcc atccgaaagg atggcctttt tgcttttcga actaacattc aattaatgga
      241 ttacctgcga taaaaatgcc ctcgtacgct ctgatttagg atgcgtaaaa aattcatcag
      301 gtgcagcttg ctccactatt tccccacgat ccataaaaat cacccggtca gcgacggttc
      361 gcgcaaaccc catctcatgc gttacacaca acattgtcat acccgattgc gccagcccaa
      421 tcatcgtatc cagcacctct ttcaccatct ccggatcgag cgccgacgtt ggctcatcaa
      481 acaacataat tttcggcttc atacacagcg aacgcgcaat ggcaacgcgt tgctgctgac
      541 caccagaaat ttgtccggga aacttatgcg catgttcggc aattctcacc cgctcaaggt
      601 aatgcatcgc cagagcttca gcctctttct ttggcatctt gcgtacccaa atcggtgcca
      661 gggtacagtt ctgtagaacg gtcagatgag ggaagagatt gaaatgctga aagaccattc
      721 ccacttcctg ccggacgcgc tcaatattgc ggatatcttc attaagttcg atgccatcta
      781 ccacgatccg tccctgttga tgttcttcca gatgattaat acaacgaatg gttgtcgatt
      841 taccggaacc tgaagggcca cacagaacga tccgttctcc cggttgcacg gttaaattta
      901 tatttttcaa aacatggaat tgtccatacc atttattgac gttttccagc gtaatcatcg
      961 cgttagcagg ttgcagtaaa atttggctca tagtgtcctc aatgcggtgt acgcccggtg
     1021 ttaaaacgtt tttccagatg ctggctatag cgcgacatgc tgaaacagaa gatccagtag
     1081 atcagcgcgg cgaaaacata cccttccgtc gacataccca accaggtggg atcaacggtt
     1141 gcctgctgaa cgctactgaa aagatcgaac aacccgataa tgatcaccag gctggtatct
     1201 ttgaagagtg cgatgatggt atttaccagc ccaggaatta ccagcttcaa cgcctgtggc
     1261 agaataacaa gcccctgagt tttccagtaa cccaacgcca gcgactctgc cgcttcatat
     1321 tgccctttag gcagcgcctg taatccgcct cgcacgactt ccgcaacata tgctgactga
     1381 aacaggatca cgccaaccag cgcgcggatc agtttgtcga tattggtgcc ttctgccata
     1441 aacaaaggca gcatgaccga agacataaac aatacggtaa tcagcggtac gccgcgccag
     1501 aactcgataa aaatgaccga taagatacgc acaatcggca tatgggagcg gcgacctaac
     1561 gccagtaaga tcccccacgg tagcgccccc gcaatcccaa cggatgcaat aattaaagtt
     1621 agcgtcagcc cgccccattg ccgggtttca acccgctcca gaccaaaaaa accgccatac
     1681 atcagccacc agacaatcag tgggtaaatc accgcccaga ccgcaatata gcgaccgcga
     1741 tgcgggagta ttttccagaa cattggtgcg attgacacaa ggccaatcag taatgccagg
     1801 ttaattcgcc agcgttggtc gtgtgggtaa agtccataca taaactgacc aaatcgttcg
     1861 tggatgaaga cccaacaggc accggctttt gtgcagtcgg cacgcgttga gccaacccaa
     1921 ttagcctgca aaaatgccca gttcagcaac ggtgggatca gttcccacat caaccatatg
     1981 cagccaatag tcagcaggct attgctccag ctggagaaca gattttttcg cacccacacc
     2041 atcgcgcggc ttgagttatg gctcgctggg cgcgagggct gagacagcaa tacttttgtc
     2101 atcatgactc cttagcgttc aacgatcgcg atgcggcggt tatagatatt catcagcagc
     2161 gagatagtca ggctgataat cagatagacc gacatggtca tggctatcgt ctcgatggct
     2221 tgccccgtct ggttcagcac ggtgccagca aacagcgaaa ccatatcggg atagccaata
     2281 gcggcggcaa gagaggagtt tttgacgatg ttgagatact ggctggttaa cggcggaata
     2341 atcactcgca gtgcctgggg aataatgacc tggcgtagcg taaccgggtt gggtaatccc
     2401 agtgaccgag ccgcttcatg ttgaccataa ggcactgcct ggatcccagc gcggataatc
     2461 tcggcgataa atgcagatgt ataaaccgaa agtgccagcg ttaaggctgc cagttcagga
     2521 attaaaacca tcccgccgcg gaagttaaag cctcgtaggg ctgggacatc ccagtgtagt
     2581 gctgcgccaa aaagccattg cgccagtaaa ggcaaaccaa tgatcaacac tgcggcgatc
     2641 ggccaggtgc ggcgcagttg tccggtcttt atctggtatg ttttattaaa gcggaatagc
     2701 ccaacagaaa ggactatagc cataacaaca gccaggataa acgcaataaa tccgtctccc
     2761 agctgcggtg acggaatata aagcccacga ttgctcaaaa aggccagatc aaacgcgctc
     2821 acagcctggc gtggtccggg caaattgcgc aacacggcaa agtaccagaa gaagatttgc
     2881 agcagcgggg gaatattacg gaagatctca atataaattg tggaaagctt tcgtagcagc
     2941 cagttatccg aaagtctcgc cagaccgata aagaagccca aaacagaagc gaacacaata
     3001 cacaatgcag aaaccagtag cgtattgagt aagccgacaa taaaaacgcg tccgtaggtg
     3061 tcgccctgct ggtaatcgat caaatgctgg acaataccga agccagcgcc gcgatccaga
     3121 aaggcaaaac ctgaagtaat gccacgatta ctgagattcg ttacagtgtt gtgaaataac
     3181 caaccaacaa tgccgacaac agcaacaacg gcaaggatct ggaataacca ggcacgaacc
     3241 gtagggttgg caaaggagag tgagccttta acggttgagc ggcgatgaga catagaaacc
     3301 tcggaaagca taacgctgaa gagagcgccg ccgtagcgac gctcgttacc tcacaccgac
     3361 ttaacgcacg ggcggcgcgt actgaatacc gccgttattc cagagattat tttgcccacg
     3421 tttaattttc agcgggcttt ctgaacctac attacgctcg aaaatttccg agtagttacc
     3481 cacctgtttg atgatgttat aggcccattt attatccaac ttcagatcct tgccgtaatc
     3541 gccttcttta cccagcagat gtgccatatc aggcgttgct ggattagccg ctttttcatc
     3601 gacgttctgg gaattgatgc ccatctcttc agcattcagc atggcgaaaa gcgtccagcg
     3661 tacaatcgag aaccattcat catcgccacg acgaactacc ggcccaagcg gttctttaga
     3721 gataacctcc ggtaagacaa tccattcagc tgggttgctt aatttgatgc gcagggcata
     3781 cagttgcgac tgatccgagg ccagcgtatc gcagcgacca gattccagtg ccttcgctga
     3841 ttcgtcagag cgatcgaaag tcaccggtgt gtacttcata ttgtttgcct tgaaatagtc
     3901 ggcaacgttg agttcggtat cagtacccgc ctgaatacag acggtagcgc catccagttc
     3961 tttcgcgctt tttagccccg ctttatcgtg cgtcaggaag ccaatgccgt cgtaataagt
     4021 gacgccagta aatgccattc ccatcccggc gtcgcgagat gaagtccagg tcgtattacg
     4081 ggagagcaaa tccacttccc ctgactgtaa agccgtgaag cgttcttttg ctgtgagtgg
     4141 ggtatatttc actttcgtgt cgtcaccaaa tacagcagcg gcaacaccac gacaaacatc
     4201 aacatcaata cctgaaaact taccgtctgc atcggcataa gagaacccag gtaatccatc
     4261 actgatcccg cattgcacaa aacctttttt ctgaacggca tcaagcgtcg cgccagcatg
     4321 cgcctgattt gcaacggcaa gcagcacgct ggcggcagcc agtgtggcta tcatcatctt
     4381 tttcataatg cttcctgtga ggcgaaaatt atcgttatag gacgtttggg aaacgtcttt
     4441 tacctgtctg tggccatcct cttataagca aaagtagtgc cagcttttgc gcccgatttc
     4501 gcgtcgcaat aagctgagtg tagacaggaa ataataaaaa cagcgccccg caatggtgcg
     4561 aaaatgaaac atgcgccaca ttttggcgca aaatatttac gcgtgtttta ctaagcagaa
     4621 taatgattgt tagcgtgagt atatttctgg tgggaagtgt gaaagttaaa ttgatgcgtt
     4681 atttcgaaag cagcgaaata acgcgatata acatgctaaa tcagcagaga attagccagc
     4741 agaatatagc aatattttat cttatgtaaa gatactgtat cgttaaacag agcgcgaaac
     4801 tccgcgccct gttcagttat ttcgacagag cgatgatccc catcgtcagg ccagcaacag
     4861 ccgctgcccc gccagcaata gccccagccg tttcccagtt atcctgagtc gtgcctttca
     4921 tacaggtatt ggtgtgaacc agacgaccct gatcgtcata aaccggaacg cagggcgaat
     4981 cgtgagcaca gcccgccagc aatgcggtga gcaatgccac aggaattaat cttttcatgg
     5041 tgttacctca gtaataaacg ctaacgctta ataagttaac tctcttatta acgagctgaa
     5101 tgccatttta tcaccggagg ttataaatat tgcggaatga ataatgacaa attatgtgaa
     5161 ttgtaaaaat agtgaaggga gcgggaacta tagaaagttt ttaaagagtg agtggaagaa
     5221 tatcttatta atttttatgg gtttcactga aaataataaa ggcacccgaa agtgccttta
     5281 tgtttctgat ttatccttta aagcaacggc ggatcaccac aaagaacacc ggtacgaaga
     5341 agattgccag caacgttgca gagaccattc cgcccattac cccgataccc actgcgttct
     5401 gcgcgccact gccggcaccg ttactgatag ctagcggtaa tacgccgaga ataaaggcga
     5461 gagaggtcat caggatagga cgcagacgca tacgtaccgc cattagtgtc gcttcaacaa
     5521 cacctttacc ctctttctcc atgagatctt tagcgaactc aacaatcaaa atagcgtttt
     5581 tggccgacaa gccaattgtc gttagcaagc ccaccataaa gtagacgtca tttttttgat
     5641 taaagagtgt cgccgccagc agcacgccga caatccctaa cggcacgacc aacataaccg
     5701 agacaggaat tgaccagctt tcatagagtg cagcaaggca caggaaaaca accacaaagg
     5761 aaattgctac cagagcggga gcctggtttc ccgataagcg ttcctgatac gacatacccg
     5821 tccagtcata accaatgccc gcaggtaatt ttgacgcaag gttttccatc aacgccatgg
     5881 catcgccgga actggttcct ggcgcggctt ccccctgaat ctccattgac ggcagaccgt
     5941 tgtagcgttc cagtcgcgga gagccataca cccaatgtga agtggtaaag gccgagaatg
     6001 gcaccatttc gccgttggcg ctgcggacat aaagtttatc gacatcttct ggcagcatac
     6061 ggaatttggc atccgcctga acatacacct ttttcacgcg accacggtcg atgaagtcgt
     6121 taacgtaagt cccacccaac gccgttgaaa tggtctgatt gatgtcagaa agtgaaacac
     6181 ctaatgcctg cgccttttcc tggtcaactt ccagtttaaa ctgcgcggtg tcttccaggc
     6241 cattaggacg cacgctgact aagctggcag gatgttgcgc cgccatgcca agcaactggt
     6301 tacgggcctg ggtcagggca tcgtgaccca gcccagcctg atcaattaac tcaaagtcga
     6361 aacccgttgc cgtgcccagt tcaacaatgg ctggcatatt gaatggaatg acaaaaccgt
     6421 cgcggatctt gcccaattcc attttggcac gatggattac cgcttccgca ctgttttcat
     6481 caccattacg ctcttcccac ggtttcagac tgacgaaggc cataccggcg ttttgtgcct
     6541 ggccgctgaa gctaaagccg ttaaccgtaa agacactttc aacgttcgct ttctcgttct
     6601 tcagatagta atccgtcact tgatccaaca ctttttgcgt ccgctcttgc gtcgcgccag
     6661 cgggtaactg aatcatggtc agaaagacac cctgatcctc ttcaggtaag aaggaagacg
     6721 gaagacgtaa aaacaacacc accattcctg caacaatcag cgcatagacc agtaaatatc
     6781 gtcctgtgga accgaggatt ttgccgacgc tgttggtgta gtggttaacg ctatgatcga
     6841 aggtagtatt aaaccagccg aagaaaccgc ccttattttc gtgatgctca gcagagacgg
     6901 gtttaagcag cgttgcacat aacgcagggg taagaatcaa tgccaccaga acagaaagcg
     6961 ccattgccga aacgatggtg atagagaact ggcgataaat tgccccagta gaaccgccga
     7021 agaatgccat cggaataaat accgctgaca gcaccatcgc gatacccacc agtgcgccct
     7081 ggatttgcga cattgatttt tccgtcgctt cttttggcgg gagcttatcc tccatcatca
     7141 cgcgctcgac gttctccacc accactatcg catcatcgac gagcagcccg atggcaagca
     7201 ccatcccgaa catcgttagt gtgttgatgg agtaaccaaa agcggcgagg atggcaaacg
     7261 tccctaacaa caccacgggt accgcaatgg tggggatcag cgttgctcgc atattctgca
     7321 agaacagata catcaccagg aacaccagca taatggcttc gaacagcgtt tttaccactt
     7381 cgtgaataga aagctggacg aatggcgtgg tgtcataagg gtagagaacc ttcattccct
     7441 gcgggaagaa tggctgtaat tccgccagtt ttgccttaat ggctttcgcg gtatcgagag
     7501 cgttcgcgcc ggttgccagc ttaatcccca ggcccgccgc cggttttccg ttgatacgag
     7561 cgataacgtt atagttttca ccgccaagtt caactcgtgc gacatctttc aggcgtacca
     7621 ccgagccgtc actgtttacg cgcagggtta ctttgccgaa ttcttccgga ttttttaacc
     7681 gcgtctgagc aataattgag gcgttcaact gttgccctgg taacgctggc gttccgccca
     7741 actgtccggc agcgatctga tcgttctgta ccttcaactg gttaatcaca tcaaccggtg
     7801 tcagtttata tttgtttagc agatcggcgt ccagccagat acgcatcgca tactgtgcgc
     7861 cgaaaagctg tacgtcaccg acgccattca gacggctaag cgtatcttta acgttagagg
     7921 ccacatagtc cgagatatcg tcctgtgtgg tgtctgggtt atcagagaca aagcccgcca
     7981 ccatcaaata gctgctactg gacttttcaa cactgatccc ctgctgctga acctcctgcg
     8041 gcagcaacgg cgtggcgagc tggagtttgt tctgcacctg cacttgcgcg atatcaggat
     8101 cggtcccgga ctggaaggta agggtaattg tcacgctacc ggcggaatcg ctggtggagg
     8161 acatatacat caggttatcg ataccgttca tattctgttc gataacctgc gtcaccgtat
     8221 cctgcacggt ctgcgcatca gcgcccggat agtttgctga aacagaaacc gcaggcggtg
     8281 caatggttgg atactgagcg acgggtaatt gtaggatcgc cagtgcgccc gccatcatca
     8341 gaataatggc cagcacccat gcaaatatcg gtcgtcgaat aaaaaagttt gccatgtcag
     8401 attaccttac ttcgatgcag tatctgcggg ggtatcggta gtggctttaa cctgctctcc
     8461 cggacgcgct ttttgcaggc cgctgacaat gacttgatcg ccagatttca gaccttcgct
     8521 aatcaaccat ttatcgccaa tcgcctgact ggcaacgaca gggcgcgctt ccacctgact
     8581 tttatcgtta acaatcagca cggttgcatc accacgcggt gtgcggctaa cgccttgttg
     8641 cgggataaga atggcgtcag gttggacgcc ttcatcaatc cgtgcgcgca caaacatacc
     8701 cggcaaaagc gtatgttgcg ggttagggaa gacggcacgt agggttatgg agccagtgct
     8761 ttcatcaacg gtcacatcag agaattgcag cgtacctttc aggggatagg tttgaccgtt
     8821 ttccatgacc aactctacgt tgctggtggc gttttcctta tgcaaatttc cttgctctac
     8881 ggattgcttc agcctcataa aatcgttgct ggattgggtc acatcaacgt agataggatc
     8941 gagctgctgg acagtcgcca gttcagtcgt ttgcccatta gtgacaagag cgccttcggt
     9001 cacggtcgat ttgccgatac gtccgctaat tggcgcagtc actttggtat aagcgagatt
     9061 gatgcgagcg ctttcgactg tggcttttgc ggcaatcacg gcggcatcgg cctggcgagc
     9121 atcagcaatg gcctggtcgt actcctgctg gctgatgtat ttcgtaccca cgagcggaac
     9181 gtaacgtttt accgtcaaat gcgcgatggc ggcggcggct tcacttttcg ccagttcgcc
     9241 tttcgcgctg tcataatttg cctgataggt cgcgggatcg atctggtaca gggactggcc
     9301 tgcttgcaca tcgctgcctt cagtgaaatt gcgattcagt acgatcccgc taacctgtgg
     9361 gcgaacttcg gctatacggt aagcattggt gcggcctggt aattcagtct taacttctaa
     9421 cggggccgtt tttacaatat gaacggtaac ctgcggttca ccgacgtgag ctttctcttc
     9481 tcccttatcg ttacaaccgg cgattaaagc cgcggagatc agaataaagg agggcaggag
     9541 gaaaaacctg gcatgtttcg tcattactat tcctcaaaaa accaaaagcg cgttatttac
     9601 ccaaaaaggc aacgcgttaa ctcgcagaaa gaaaaataca gttcgctatc ctacaaatta
     9661 tcattcgtcg atgtaaggaa tagttatgaa tacaggcgtc tcaaggcaca taaacacaaa
     9721 aaaagattaa tattcta
//
LOCUS       DAPGWB010000165         9652 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.167, whole genome shotgun sequence.
ACCESSION   DAPGWB010000165 DAPGWB010000000
VERSION     DAPGWB010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9652
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.167"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(141..1160)
                     /locus_tag="RHX79_003891"
     CDS             complement(141..1160)
                     /locus_tag="RHX79_003891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDV2199006.1"
                     /translation="MGRPRKNKKDNALPPRVRSNGYSYVWKPEGSTRTIGLGRVWETS
                     VAKVWQNYELEKAKLHNIMTVAKLWHMFMDSPAFTELAPRTQKDYRQHQRALLAVFGK
                     VLADNVKIEQVRIFMDKRGLESKTQANHELASLSRVYGWGYERGYVKNNPCKGVRKFT
                     LKARTVYITDEQYAAIYAEAIPQLRIAMEISYLCAARLGDVLELKWQDIMEKGIYIEQ
                     NKTGTKQIKEWSPRLRTAIQLARNVSSGTCEYVINTTKGGKVIAKTLNNWWNQAKRAA
                     EQKAGVPFGCNFHDIKAKGISDYEGSSRDKQIFSGHKTENQVLIYDRKTKITPTLDLP
                     LVVSK"
     gene            complement(1129..1380)
                     /locus_tag="RHX79_003892"
     CDS             complement(1129..1380)
                     /locus_tag="RHX79_003892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000273169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDV2199007.1"
                     /translation="MYELTLSPAEIQEITKYERYTKQQHQLRLHGIPFVIGPKNEPIV
                     LRRDIPHGLTTMPKAPELVSAEPDFEALNNGKTKKKQKR"
     gene            complement(1447..3918)
                     /locus_tag="RHX79_003893"
     CDS             complement(1447..3918)
                     /locus_tag="RHX79_003893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease"
                     /protein_id="HDV2199008.1"
                     /translation="MSKVFICAAIPDEQAIKEEGAVAVATAIEAGDERRARAKFTWQF
                     LEQYPAAQDCAYKFLVCEDKPGMPRPAIDSWDTEYMQENCWDEESASFIPVEPESDPM
                     NVNFDKLSPEVQNAVLVKFDTCENITIDMVISAQELLQEDMATFDGHIVEALMKMPEV
                     NAMYPELKLHAIGWVKHKCIPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARA
                     RANQQYTDNSTGKISPVIAATHREYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWA
                     KNEVIDNDREDWKRISASMRKQPDALRYDRQTIFGLVRERPIDIHKDPVALNKYITEY
                     LTTKGVFEDEGRNQSATDTLSSPVPETDAVETAIPDNEKTECKVEVEPSVEREGPFYF
                     LFTDKDGEKYGRANKLSGLNKALTAGATEITKEEYFARKNGTYSGSQQNTGASDTTAQ
                     PEPVKVTADEVNKIMQAANITQPDADKLLAVSRGEFVAGISDPNDPKWVKGIETRDSV
                     NQNQQETKQNDQKAEQNSPNALQNEPETKQPEPVAQQEAEKVCTACGQTGGGNCPDCG
                     AVMGDATYQETFDDKNQVEVQEDDSEKMEGAEHPHKENAGSAQDHASDSETGETADPL
                     ITVNGHHVITSTSRTCDHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTID
                     LETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWG
                     NGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNA
                     LDDARYQAKYVSAIWQKLIPNPVDF"
     gene            complement(3999..4202)
                     /locus_tag="RHX79_003894"
     CDS             complement(3999..4202)
                     /locus_tag="RHX79_003894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001532593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1482 family protein"
                     /protein_id="HDV2199009.1"
                     /translation="MNTVFALVLTVFLNTGEPVDLVIGIHDSMKECMAAAAEQKIPGN
                     CYPVDKVIRMDNNEIPAGLKTAP"
     gene            complement(4205..4387)
                     /locus_tag="RHX79_003895"
     CDS             complement(4205..4387)
                     /locus_tag="RHX79_003895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibition protein DicB"
                     /protein_id="HDV2199010.1"
                     /translation="METLLPNVNTSEGCFEIGVRISNPVFTEDAINKRKHERELLNQI
                     CIVSMLARLRLMQKGR"
     gene            complement(5133..5522)
                     /locus_tag="RHX79_003896"
     CDS             complement(5133..5522)
                     /locus_tag="RHX79_003896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000394567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199011.1"
                     /translation="MEFKDLPKEIQEIAAHTLRQRLNEVALEAETKKDIDNMARNVRD
                     AFTGLYSVSVEDNNIPDEQEESTDPHKFWKSVEVIAKAKLLELNNLYHRENDGRQSLH
                     HQGVATLIALTKEQGEYHPVALNDTVK"
     gene            complement(5534..5686)
                     /locus_tag="RHX79_003897"
     CDS             complement(5534..5686)
                     /locus_tag="RHX79_003897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000379546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 family protein"
                     /protein_id="HDV2199012.1"
                     /translation="MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTESGARRW
                     LARNTD"
     gene            complement(6006..6482)
                     /gene="racR"
                     /locus_tag="RHX79_003898"
                     /gene_synonym="rarC"
     CDS             complement(6006..6482)
                     /gene="racR"
                     /locus_tag="RHX79_003898"
                     /gene_synonym="rarC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor RacR"
                     /protein_id="HDV2199013.1"
                     /translation="MLSGKDLGRAIEQAINKKIASGSVKSKAEVARHFKVQPPSIYDW
                     IKKGSISKDKLPELWRFFSDVVGPEHWGLNEYPIPTPTNSDTKSELLDINNLYQAASD
                     EIRAIVAFLLSGNATEPDWVDHDVRAYIAAMEMKVGKYLKALESERKSQNITKTGT"
     gene            6606..6902
                     /gene="ydaS"
                     /locus_tag="RHX79_003899"
     CDS             6606..6902
                     /gene="ydaS"
                     /locus_tag="RHX79_003899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin YdaS"
                     /protein_id="HDV2199014.1"
                     /translation="MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPA
                     ERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT"
     gene            6925..7350
                     /locus_tag="RHX79_003900"
     CDS             6925..7350
                     /locus_tag="RHX79_003900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HDV2199015.1"
                     /translation="MKIKHEHIRMAMNAWARPDGEKVPAAKITRAYFELGMTSPELYD
                     DSHPEALARNTQKIFRWVEKDTTDAVEKIQALLPAIEKAMPPLLVARMRSHSSVYFRE
                     LVETRERLVRDADDFVAVAIAGFNQMNRGGPAGNAVVMH"
     gene            7374..8336
                     /locus_tag="RHX79_003901"
     CDS             7374..8336
                     /locus_tag="RHX79_003901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310303.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2199016.1"
                     /translation="MSSKLHGLVWEGCAFTGMILSRVAVMARLADYSNDEGVSWPAVE
                     TIRRQIGAKSESTVKAAIAELEKNGWLTKEERKVGGRNESNIYRLNVEKLEAAAEAAR
                     EAYKPKRKISPAKNDPLTVDQSNIAPSTIDPSNFDGSTVCKKQPVRGAMVGPDPSVLK
                     PDPSDKRSFRPEASQPDPQTAEQDFLTRHPDAIVFSAKKRQWGNQEDLACAQWIWGRI
                     VSLYEQAASDDGEITRPKEPNWTAWANDVRIMRMLDGRTHRQICEMFGRVQRDPFWVK
                     NIMSPSKLRDKWDELVIRLGRSPVQRCVNHISEPDTEIPPGFRG"
     gene            8381..9175
                     /locus_tag="RHX79_003902"
     CDS             8381..9175
                     /locus_tag="RHX79_003902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000450657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1627 domain-containing protein"
                     /protein_id="HDV2199017.1"
                     /translation="METLIDTLKAMQKVTCTELAASLGIEPAEAIKMLREYEELGEVV
                     SVNGYWSVSERQTGVKEKKVTVCKVERKSHPVVSRKEREPLKRCEILSTLAHSGAMTT
                     AEIAIAVGRADCVRSLVSAMEKLCRDGMAIKLGQGKGCKWMLVKETGENLPAEPKVVS
                     VAKTPGKGFPQPAGVALPVQEAATQEEIKTDTVGDIVQSLPSFTETRANGLILPSLHM
                     ASRELRRAKSHVQKWERVCAALRELNKHRDIVRQIVDSSSRIVSEK"
     gene            9192..9611
                     /locus_tag="RHX79_003903"
     CDS             9192..9611
                     /locus_tag="RHX79_003903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF977 family protein"
                     /protein_id="HDV2199018.1"
                     /translation="MAKVFTQEEREKIKGQIVDLVRQSGRETLRQLEAKTGATRYQIS
                     VLARELVANGDVYNSGYGLFPSEQARKDWQNARKKLSRAKVKKPVVVDPDLIWSLPDG
                     EIRRYDRRHNIICSECRKSEVMKRILSFYQGDVRYLL"
BASE COUNT         2392 a         2158 c         2368 g         2734 t
ORIGIN      
        1 agaaaaataa agaaaaatca gtacaatacg gaaaatagcc gaaaagttaa tcagacttga
       61 caccaagaaa aatcaatata ttagggagtt attcagagtt aatataccaa gtctttttgc
      121 cagaaaattt tctgtattgc ctacttactg accacaagcg gcaaatccag tgttggtgtt
      181 attttggttt tacgatcgta aatcaacacc tgattttctg ttttgtgtcc actgaaaatt
      241 tgtttgtcgc gactgctgcc ttcgtaatct gaaatccctt tggcttttat gtcatggaag
      301 ttgcacccaa acggaacgcc ggctttttgc tcggctgcac gtttagcctg attccaccag
      361 ttgttcagcg tcttggctat taccttcccg cctttggttg tgttgatcac atactcgcat
      421 gtgccggaag atacatttcg ggctaactgg atcgccgtac gtaatcgcgg agaccattcc
      481 ttgatttgtt tagtgccggt cttgttttgc tcaatgtaaa tccctttctc cataatatcc
      541 tgccatttca gctcgagtac atcaccgagc cttgccgcac aaagatagga tatctccatt
      601 gcaatacgta actgtggaat tgcttccgca tatattgcag catactgttc atcggtgatg
      661 taaacagtac gggctttaag tgtgaatttt ctgactcctt tgcatggatt atttttcaca
      721 tacccacgct catatcccca tccgtataca cggctcagac ttgccagttc atggtttgcc
      781 tgggtcttgc tctcaagtcc tcgcttatcc atgaaaattc ttacctgttc aatttttaca
      841 ttatcagcaa gcacttttcc gaatactgcc aacaatgccc tttgatgttg ccgataatct
      901 ttttgggttc ggggggccag ttctgtaaat gcaggggagt ccataaacat gtgccataat
      961 ttagctactg tcattatgtt gtggagtttt gctttttcca gctcataatt ttgccagact
     1021 ttagctacgc tggtttccca cactcttccg agccctatag ttcttgtgct tccttcgggt
     1081 ttccatacgt aactgtaacc attcgatcta acacgcggtg gtagtgcatt atcttttttg
     1141 ttttttcttg gtcttcccat tgttcagcgc ctcaaaatcg ggttcagcgg aaaccagttc
     1201 aggtgctttt ggcatcgtag tcagtccgtg tggaatatcc ctgcgaagaa ctattggttc
     1261 gtttttagga ccgattacaa atgggatacc gtgcagcctt aactggtgtt gctgttttgt
     1321 gtatcgctcg tatttcgtga tctcttgaat ctctgctggc gatagagtta attcgtacat
     1381 gtggtcacgt gccttacagc atgaccgccg ccaatataat tcggggacgg cgatcagggt
     1441 tgaacattaa aaatcaaccg gattcgggat cagtttttgc cagattgctg aaacgtattt
     1501 tgcctggtaa cgggcgtcat caagtgcatt atggcgctca ccttcgaatg gaatagccgt
     1561 tctggcatcg aagtctatgg ctttccccag ctcaacgatt gtgcgtacat cgcgatcgtt
     1621 gtagtaacgc cacgggcagg ggatcccctg ccgttcgtat gaacggcgca aaatcgtgtt
     1681 gtcgaagttg gctccatttc cccagacctg aacaaaaaat tcaccggagt tttcgtcgat
     1741 aaattcccgc aattgtaaca gtgcatcatc taacgggatt tcatcggtca taatggcaga
     1801 ttgcgcttcg cgtgattgct taagccacca tttaatggtg tcccgatcaa tgactccgcc
     1861 agcagtttcc agatcgatag tcttactaaa ttccggtccc atatctccgg tttgaggatc
     1921 gaaaaatatt gcacctattg agataatcgg ggcatcagga ttttttccca tggtttcaag
     1981 gtcgatcatt agatggtcac acgtcctgct ggtggatgtg ataacgtgat gaccgttcac
     2041 cgtaattaag ggatctgccg tctcgccagt ttcactatcg ctggcgtgat cctgagcgct
     2101 gccagcattc tctttgtgtg gatgttcagc gccttccatt ttctccgaat cgtcttcctg
     2161 aacttcaacc tggttcttgt catcgaatgt ttcctggtat gttgcgtcgc ccatcaccgc
     2221 accacaatca gggcagttgc cgccgccggt ctgaccgcag gcggtgcaga ctttttccgc
     2281 ttcctgttgc gctactggct caggttgttt cgtttctggc tcgttttgta acgcatttgg
     2341 gctgttttgt tccgctttct ggtcgttctg tttcgtttct tgctggttct gattcactga
     2401 atcgcgggtt tcaatcccct tcacccattt cggatcattc gggtcgctaa tccctgcaac
     2461 aaattcacca cgtgatacag caagcaactt atcggcgtca ggctgggtga tattggctgc
     2521 ctgcataatt ttgtttactt cgtcagcggt aacttttacc ggctctggtt gtgcggtcgt
     2581 gtcagatgca ccagtatttt gttgtgaacc tgagtatgta ccgtttttac gggcaaaata
     2641 ttcttctttc gtgatttcag tagcccctgc agtcagcgcc ttattcagac cagaaagttt
     2701 gtttgcgcga ccatattttt cgccatcctt gtcggtgaag aggaagtaga acggcccctc
     2761 acgctctaca gatggttcga cttccacttt gcattcggtt ttttcgttgt ccggaattgc
     2821 cgtttccact gcatcagttt ctggtactgg cgacgagaga gtatcagttg cgctctgatt
     2881 tcttccttca tcttcaaaca cgccctttgt agtcaggtat tcagtaatgt atttgttcag
     2941 tgccacaggg tctttgtgaa tgtcgatcgg acgttcacgg acaaggccaa aaatagtctg
     3001 gcggtcgtag cgaagggcat caggctgttt gcgcattgat gccgagatac gcttccagtc
     3061 ttcgcggtcg ttgtcgataa cttcattttt tgcccagcga tggatgctgc cgtcaatgtt
     3121 tccggcatcc acatcaccag gccagagagc gtaggccagt tcgtcatcca gtgttttcca
     3181 tgtctgcttg tattcgcgat gagtggcagc aatgaccggg ctgatttttc ctgttgaatt
     3241 gtcagtgtac tgttgattgg ctctggcgcg ggcgagatca acaacagacg tgtattttcc
     3301 ggtttccttg cgttcacctt cgcgacgttt tttccagatg cgcatctctg cctgaatttc
     3361 gggccattta gcaccaggaa tacatttatg cttaacccac ccaatggcgt gcaacttaag
     3421 ctccggatac atggcgttaa cttctggcat tttcatcaac gcttcaacga tatgtccgtc
     3481 gaatgttgcc atgtcttcct gcaacaattc ctgtgcgcta ataaccatat caatggtgat
     3541 gttttcacat gtgtcgaact taaccaggac cgcgttctgt acttcagggg acagcttgtc
     3601 aaaattgacg ttcatcggat cggattctgg ttcgaccgga ataaaggaag cggattcctc
     3661 atcccagcag ttttcctgca tatattcggt atcccaggag tcgatggcag ggcggggcat
     3721 gccgggttta tcctcgcaaa caagaaattt ataagcgcag tcctgagcag ccggatattg
     3781 ctccaggaat tgccaggtaa atttggctcg ggcgcggcgt tcgtcgccgg cttcaatggc
     3841 agtggctaca gcgactgcac cttcttcctt tattgcctgt tcgtccggaa tggcggcgca
     3901 aataaagact ttactcattt tgttttaacc tcattacaga tttaagggtg aacaaatccc
     3961 tgccattgct ggcatataaa aatgaaaccg gatattaatt acggtgctgt tttaagtcct
     4021 gccgggattt cgttattgtc catgcgaata actttatcaa ccggataaca gttgccggga
     4081 attttctgtt ccgctgcggc agccatgcat tctttcattg agtcatgtat accaataaca
     4141 agatcgactg gctcgcctgt attaagaaaa accgtcagaa cgagtgcaaa tactgtattc
     4201 attgtcatcg tcctttttgc atcaggcgta aacgggccag cattgaaaca atgcatattt
     4261 gatttaatag ctcccgttcg tgttttctct tattaatggc atcttcagta aatacagggt
     4321 tactgattct gacaccaatt tcaaaacaac cttcagacgt attgacgttt ggtaataacg
     4381 tttccattat cgcatcctca acaatgaatt ttgtgatgcg gtgcctggtg cctccaggtg
     4441 acgttaacca gttaataatt aacgccggat acagagaacc cacccataag aaccaatacg
     4501 gaagtcaact ggccttttta actgttccgc gtgcgctgag ccgcattcac cgcatcacaa
     4561 aattcacttt aaaaagggcg ggtatcacaa gggaaaacaa aaaacggata cccgccaaaa
     4621 ggtaatcaac atgggttgtt gcagcggggt tgtcacttaa gcgtatggtc aacctgacaa
     4681 cccggtgtcc tcaacgggga aggaataacc ccgccatact taccgccgcg ccatttcgcg
     4741 gattgccaca accggaagcg cacagacgaa gatgtcagtg gtacacaaca aagggaggaa
     4801 tgacttcgcc gtgcgctttc gcgttatgcc ctgacttttc agggatatat cctttcagta
     4861 aactgtttgt gccggattct tatccgtgtc cggcgcacga ccacgcgctg tcacgtgtgg
     4921 tctccattct caaccagtaa cctcaatgga ggataaaatt aaaatggtca gcaaactaaa
     4981 tcagactcgc tggaagattc attatgaaac agcgcgttta aattatattc ttgaatgttt
     5041 tggggataac cttgctgctg aggaaggcta tccaaaccat gtcgatggtt tcgaagcgat
     5101 atatctttat ctatcccgta aacatggatg gactatttca cagtgtcgtt taatgccact
     5161 ggatgatatt cgccttgctc tttcgttaga gctatcaggg tggcgactcc ctgatgatgc
     5221 aaagattgac gaccatcatt ctcacgatga tataagttgt taagttccag tagtttggct
     5281 tttgcaatga cctctacaga tttccagaat ttgtgggggt ctgtactctc ttcctgttcg
     5341 tcaggaatgt tattgtcctc aacagaaaca gaatacagtc cggtaaacgc atcgcgcaca
     5401 ttacgagcca tattatcaat gtcttttttc gtttcagctt ctaatgcaac ttcgttcaga
     5461 cgttgacgaa gtgtatgtgc tgcaatttct tggatttctt ttggtaaatc tttaaattcc
     5521 atagtcaacc tcatcagtca gtatttctgg ctaaccagcg acgcgcgcca gattcggttt
     5581 taaacgtttt gcttttggta tacgtcatcg cggtgaatgt gccgtcctgg ttgggaaaca
     5641 cgccgtatac cagagattcg ttgttgccaa gatcgatagt atccatgttg acctcatgtc
     5701 cccttaacgc cggggtagcg gaacaaaaac ctgctgcata gttattaaag ttgaaccctg
     5761 ccgtcatgtt cttacgcctc gggctggcta cttaacccct gaccactgcc tggtaactcg
     5821 aagtattgcc ctgcgttctg tggggcgggg tgggtggtat gctggaacta taggtaatgc
     5881 ctaattgatt gtcaataggc tatgcctaat gttttgatcg taacctaata ggtgatggcg
     5941 acagcagaaa gtgatggggg ggttaaataa cggaatctag gagttttccg tcagaccata
     6001 taagtttaag ttccagtttt tgtgatgttc tggcttttcc gttcagattc tagagctttc
     6061 agatacttac ccactttcat ttccatcgct gctatgtagg cgcgaacatc gtggtcaacc
     6121 caatctggtt ctgtagcatt tccagataac aggaaagcta caatcgctct tatttcatca
     6181 gaggctgctt gataaaggtt gtttatatct aaaagttcac tttttgtatc tgaattggtg
     6241 ggggttggta tggggtattc gttaagcccc caatgctctg gaccaacaac atcagaaaag
     6301 aaacgccata attctggaag tttatcttta cttatagagc ctttcttaat ccagtcataa
     6361 attgatggtg gttggacttt gaagtggcgt gcgacctccg cctttgattt gacggatccc
     6421 gatgcgattt ttttgttaat ggcctgctct atcgctcggc ctaagtcttt accactaagc
     6481 attgcttaat attctcctat gctcattgca ttaggcaatc cctaccttta tcgcattagg
     6541 catagcctat tgacatttac gttaggcgtc gcctaatatt tctgtgtgtt tttggagttc
     6601 attcgatgaa aaaagagaac tattcattca agcaagcttg tgctgttgtc ggtgggcaat
     6661 cagcaatggc taggctttta ggtgtatcac ctccaagcgt aaatcaatgg atcaaagggg
     6721 tacgtcaatt gcctgccgag agatgtccag caattgaacg tgcaacaaga ggtgaggttc
     6781 tgtgcgaaga acttcgtcct gatattgact ggtcatattt acgacgttcg gcatgttgtt
     6841 cgcagaatat gtcagtgaag caactaaatg acagtaacaa atcctcattt gatcatacct
     6901 gaaacatcaa gaggcaaatg attcatgaaa atcaagcatg aacacatccg catggcgatg
     6961 aatgcttggg cgcgtccgga tggtgaaaaa gttccggcgg ccaagataac cagggcttat
     7021 ttcgaactgg gaatgacgtc cccggaactg tacgacgaca gccatccaga agccctggct
     7081 cgtaataccc agaaaatttt ccgctgggtg gagaaagaca ctactgatgc ggttgaaaaa
     7141 attcaggcgt tgttaccagc gatcgaaaaa gcaatgccac ctctgctggt ggcccggatg
     7201 cgcagccaca gttcagtcta ttttcgggag ttggtggaga cgcgggaacg actggtgaga
     7261 gacgctgatg attttgtcgc agtggcaatc gccggtttca atcagatgaa tcgtggtggc
     7321 ccggcaggaa atgctgtggt gatgcactaa aagcacggtg ttcggggttt tttatgagca
     7381 gcaagcttca tggtcttgtc tgggaagggt gcgccttcac cggcatgatc ttatccaggg
     7441 tggcagtaat ggctcgcctt gcagactaca gcaatgacga aggtgtgtca tggcctgcag
     7501 tggagaccat tcgtcgtcag attggggcaa agagtgaatc aacggttaaa gcggcgatag
     7561 cggaactgga aaagaacggc tggctgacga aggaggagcg taaggtcggt gggcgtaatg
     7621 aaagcaatat ctaccgcctt aatgtggaaa aactcgaagc agcagctgag gcggcgcgtg
     7681 aggcatataa accgaaaaga aaaattagcc cggcaaaaaa tgacccgtta acagttgacc
     7741 agtcaaatat tgccccctca acgattgacc cgtcaaattt tgatggatca accgtttgta
     7801 aaaaacagcc ggttaggggg gcgatggttg gccccgatcc gtcagtatta aaacctgatc
     7861 cgtcagataa aagatctttt cgtccggaag cttcgcaacc ggacccgcag acggctgaac
     7921 aggacttttt aacccgacat cctgatgcga ttgtgtttag tgcaaaaaaa cgtcagtggg
     7981 gaaatcagga ggatttggca tgcgcacagt ggatctgggg gcgaatcgtg agtctttacg
     8041 aacaggccgc cagcgatgat ggcgagatca cccgaccgaa agaacccaac tggacagcat
     8101 gggccaatga cgtgcgcata atgcggatgc tggatggcag aactcacaga caaatctgcg
     8161 aaatgtttgg tcgggtacag cgggatccat tctgggtaaa aaacatcatg agtccgtcaa
     8221 aacttcgcga taaatgggat gagctggtta tccgtctggg gcgttcgcct gtacagcgtt
     8281 gtgtgaatca tatttctgaa ccggacaccg aaattccgcc agggttcagg ggataagttt
     8341 ggtttgagat tggtaaatga ttttaacggg agaaattttg atggaaacgt tgattgatac
     8401 gttaaaagcg atgcaaaagg tgacgtgcac cgagcttgct gccagtttgg gcattgaacc
     8461 tgcagaggcg attaaaatgc tgagggagta cgaagagctg ggagaagttg tgtcggttaa
     8521 tggttactgg tctgtttcag aacgacaaac gggcgtgaaa gaaaaaaaag taacggtgtg
     8581 taaagtggaa agaaaatccc atccggtggt cagtagaaaa gagcgtgagc cactgaaacg
     8641 ctgcgaaatc ctgtccacac ttgctcatag tggggcaatg accaccgctg agattgcaat
     8701 tgctgtgggg cgtgctgatt gcgtcaggtc gctggtttct gcgatggaaa agctttgccg
     8761 cgatggcatg gcgattaagc tgggacaggg gaaggggtgt aagtggatgc tggtaaaaga
     8821 aaccggggaa aatttaccag cagagccgaa agttgtatcg gtagcgaaaa cacctggtaa
     8881 aggctttcct cagccagccg gtgttgcgtt accagtacag gaagcggcaa cacaggaaga
     8941 aattaaaaca gatactgtgg gggacattgt gcagtcgttg ccatcgttca ccgaaacgcg
     9001 agcgaatggc ctgattttac catcgctgca tatggcaagc cgcgaacttc gccgggcgaa
     9061 aagtcatgtc cagaagtggg agcgagtctg cgccgcgctg cgggagctga acaagcaccg
     9121 ggatattgtc cgacagattg tcgattcctc cagtcgtatt gtgtcggaaa agtgattcca
     9181 ggggagggct tatggcaaaa gtatttacac aggaagagcg ggaaaaaatt aaagggcaga
     9241 tcgttgatct cgtacgccag agtgggcgcg agacgttacg acaactggaa gctaaaacgg
     9301 gggcgacaag atatcagata agtgttcttg ccagggagtt ggttgcgaat ggtgacgtat
     9361 acaactctgg ctacgggtta ttcccgtctg agcaggcacg taaagactgg caaaacgccc
     9421 gcaaaaaact atcgagggca aaggtgaaga aaccagttgt ggttgatcca gaccttattt
     9481 ggtcattacc agacggagaa atacgtcgtt acgacaggcg tcataatata atttgtagtg
     9541 agtgccgtaa aagcgaagtt atgaagcgca tattgtcgtt ttatcaggga gatgttcggt
     9601 atttattgta gtgatgatat ttaagagcat taattaatat gtgaattgac at
//
LOCUS       DAPGWB010000166         9553 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.168, whole genome shotgun sequence.
ACCESSION   DAPGWB010000166 DAPGWB010000000
VERSION     DAPGWB010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 9553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9553
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.168"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..738
                     /locus_tag="RHX79_003904"
     CDS             <1..738
                     /locus_tag="RHX79_003904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FRG domain-containing protein"
                     /protein_id="HDV2199019.1"
                     /translation="KSSYELVPSLYRKNQNGTYRHLASESDLVREILSARPNEFKEDK
                     FTIDKLVRMQHYGLPTRLLDITSNPLIALYFACCSNPDENGQVIAFSTNRKKIKYFDS
                     DTVSCIANLSLLSYEELEKLSSIDARKGSMELPELTDKLADLIQNEKSYFRNRIIPDD
                     LKKVVFLKAKINNERIQSQAGAFLLFGLDPILPETDAEFPLNRVEIANKNKILEELAQ
                     LNISESTVYPSMEKTAAEITKKFLSVS"
     gene            complement(976..1398)
                     /locus_tag="RHX79_003905"
     CDS             complement(976..1398)
                     /locus_tag="RHX79_003905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001151251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF977 family protein"
                     /protein_id="HDV2199020.1"
                     /translation="MAKVFTQEEREKIKGQVVELVRRSGRETLRQLEVKTGATRYLMS
                     VLARELVASGDVYNSGYGLFPSEQARKDWQNARKKLSRVKLKEPSAVDPDLIWSLPDG
                     EIRRYDRRHNMICTECRKSEVMQRILSFYQGDVRYLLK"
     gene            complement(1439..2404)
                     /locus_tag="RHX79_003906"
     CDS             complement(1439..2404)
                     /locus_tag="RHX79_003906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001373617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199021.1"
                     /translation="MSLLFAERPLVINTQLAMKIGLNEAIVLQQLHYWLRDTNSGMEC
                     DGVRWIYNTTEQWLEQFPFWSESTLKRAFASLKTLGLLRCEKLNKSKRDMTNFYTINY
                     GSELLDGGKLSESIGLKCAAPSGQNDTMEEVKMKRSIGSKRLNVIGSKWPDDLTENTT
                     EITTENKKTSRPEASQPDPQTVEQDFLTRHPDAVVFSAKKRQWGSQEDLACAQWIWGR
                     IVSLYEQAASDDGEISRPKEPNWTAWANDVRTMRMLDGRTHRQICEMFGRVQRDPFWV
                     KNIMSPSKLREKWDELVIRLGRSSVQRCVNHISEPDTEIPPGFRG"
     gene            complement(2385..2906)
                     /locus_tag="RHX79_003907"
     CDS             complement(2385..2906)
                     /locus_tag="RHX79_003907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001578395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199022.1"
                     /translation="MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNID
                     VQRVTDEGGAVDQRALGVNRVKIFERWKAIDTRDKREKFRALVPAIMEAIRISDFRLY
                     REISDGKSITYMIAGLNKEYGDVVESGLLFADPAVVDRETDELIEKAIAFKLAYRQQY
                     QQKAGWNYESSFC"
     gene            complement(2890..3120)
                     /gene="dicC"
                     /locus_tag="RHX79_003908"
     CDS             complement(2890..3120)
                     /gene="dicC"
                     /locus_tag="RHX79_003908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicB transcriptional regulator DicC"
                     /protein_id="HDV2199023.1"
                     /translation="MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQ
                     EASGGELQYDPKVYDEYRKTKRAGRLNNENHS"
     gene            3204..3611
                     /gene="dicA"
                     /locus_tag="RHX79_003909"
     CDS             3204..3611
                     /gene="dicA"
                     /locus_tag="RHX79_003909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional dual regulator DicA"
                     /protein_id="HDV2199024.1"
                     /translation="METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERDD
                     SEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPES
                     EQDTQLAEMRARVKNFNKLFEELLKARQRTNKR"
     gene            3778..3933
                     /locus_tag="RHX79_003910"
     CDS             3778..3933
                     /locus_tag="RHX79_003910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 family protein"
                     /protein_id="HDV2199025.1"
                     /translation="MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTENGARRW
                     LERNSGE"
     gene            3935..4510
                     /locus_tag="RHX79_003911"
     CDS             3935..4510
                     /locus_tag="RHX79_003911"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199026.1"
                     /translation="MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALRIRMCSHNDA
                     EHKYEKQNQTAENFVLEPGETLFKIPVTCPICGFTSEELDDSCNNQETTKYVEDDTEC
                     ARRTIISTSPNSRTNKSHFERVINPLPQTNKKDAGGQKTQWNNGISVKKRRSIKDKQR
                     SANNCKRFIPVINFHVLKRIYWWLRHCLMNP"
     gene            4997..5185
                     /gene="dicB"
                     /locus_tag="RHX79_003912"
                     /gene_synonym="ftsT"
     CDS             4997..5185
                     /gene="dicB"
                     /locus_tag="RHX79_003912"
                     /gene_synonym="ftsT"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibition protein DicB"
                     /protein_id="HDV2199027.1"
                     /translation="MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKI
                     CIVSMLARLRLMPKGCAQ"
     gene            5182..5373
                     /gene="ydfD"
                     /locus_tag="RHX79_003913"
     CDS             5182..5373
                     /gene="ydfD"
                     /locus_tag="RHX79_003913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysis protein YdfD"
                     /protein_id="HDV2199028.1"
                     /translation="MNSAFALVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGN
                     CYPVDKVIHQDNNEIPAGL"
     gene            5466..7937
                     /locus_tag="RHX79_003914"
     CDS             5466..7937
                     /locus_tag="RHX79_003914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease"
                     /protein_id="HDV2199029.1"
                     /translation="MSKVFICAAIPDEQAIKEEGAVAVATAIEAGDERRARAKFHWQF
                     LEHYPAAQDCAYKFLVCEDKPGIPRPALDSWDAEYMQENRWDEASASFVPVETESDPM
                     NVTFDNLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEV
                     NAMYPELKLHAIGWVKHKCKPGAKWPEIQAEMRIWKKRREGERKEAGKYTSVVDLARA
                     RANQQHTENSTGKINPVIAAIHREYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWA
                     KNEVIDNDREDWKRISASMRKQPDALRYDRQTIFGLVRERPIDIHKDPVALNKYITEY
                     LTTKGVFEDEGTNQSATDTLSSPVPETDAVETAIPDNEKTECKVEVEPSVEREGPFYF
                     LFTDKDGEKYGRANKLSGLDKALSAGATEITKEEYFARKNGTYSGSQQNTGASDTTAQ
                     PGSVKVTADEVNKIMQAANISQPDADELLAVSRGEFVEGISDPNDPKWIKGIQTRDSV
                     NQNQQETEQNDQKAEQNSPNTQQNEPETKQPEPVVQQEPEKICTACGQSGGGNCPDCG
                     AVMGDATYQEIFDGENQPEVQENDPEEMEGTAHQHKENTGGNQHHASDSETGEASDPL
                     IKANGHHNLTSTSRAGIHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTID
                     LETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVHVWG
                     NGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNA
                     LDDARYQAKYVSAIWQKLIPSQADS"
     gene            8010..8261
                     /locus_tag="RHX79_003915"
     CDS             8010..8261
                     /locus_tag="RHX79_003915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000005552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excisionase family protein"
                     /protein_id="HDV2199030.1"
                     /translation="MSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREY
                     KHVAHDGMPWDNSPCFYNLEEIDRWIERQASARPRRHLT"
     gene            8296..>9553
                     /locus_tag="RHX79_003916"
     CDS             8296..>9553
                     /locus_tag="RHX79_003916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000876991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDV2199031.1"
                     /translation="MKYPTGVENHGGKLRIWFVYKGVRVRENLGVPDTAKNRRVAGEL
                     RSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLN
                     TYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN
                     NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK
                     NLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLI
                     KPAIDALRSQMTLTRLSKEHIIDVHLREYGRTEKQKCTFVFQPEVSARVKNYGDHFTV
                     DSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVY
                     GKWMSDNNNAQVALLNTQLSEFAPTMP"
BASE COUNT         2871 a         2240 c         2104 g         2338 t
ORIGIN      
        1 aaaagctcat atgagcttgt cccctctctt tacagaaaaa atcaaaacgg gacgtacagg
       61 catcttgctt cagaatctga tttagtacgt gaaatactca gcgcaagacc aaatgaattt
      121 aaggaggata aatttacgat tgataaactt gtccgcatgc agcattatgg cttgcctaca
      181 agactcttag acattacatc taacccactg atagcattat attttgcttg ctgttcgaac
      241 cccgatgaaa acggacaggt gattgcgttt tcaacaaaca gaaagaaaat taaatatttc
      301 gactcagaca cagtgagctg tatagcaaac ttatcacttt tatcttacga agagttggaa
      361 aaattgtctt ccattgatgc cagaaaaggt agtatggagt tacctgaact cactgataaa
      421 cttgcagacc ttatacagaa tgaaaaatca tatttcagaa acagaataat ccctgatgac
      481 ttaaagaaag ttgttttcct taaggcaaaa ataaataatg aacgaataca atctcaggca
      541 ggagcttttc ttctgttcgg acttgatccc attttaccgg aaacagatgc tgagtttcct
      601 cttaacagag tggagatagc gaacaaaaat aaaattctgg aagagctggc acagcttaat
      661 atatccgaaa gcactgtata tcccagcatg gagaaaacgg cagcagaaat tacaaaaaag
      721 tttttatcgg tatcataaag ggataaacta aaggaaacga aaactaagac tgcgcagtct
      781 tcaggtggaa gtactcatcg ggaacggttt caggggcaaa aactggaagc tccaatggcc
      841 ttgagctgct ccctataaat taacatatct caatgttatc aatgtctgct tttggcacaa
      901 agcggacaac cacgctagct ctaccctgtg ccacaaaatg tcaatttgca tctgaactaa
      961 tgcactttaa tctcgtcact tcaataaata ccggacatcc ccctgataaa acgacaatat
     1021 gcgctgcata acttcgcttt tacgacactc agtacaaatc atattatgac gcctgtcgta
     1081 acgacgtatt tctccgtcag gtaatgacca gataaggtcc ggatcaaccg cagatggttc
     1141 cttcagcttt acccttgaga gctttttacg ggcattttgc cagtccttac gcgcctgttc
     1201 agacgggaat aacccgtaac cagagttgta tacatcgccg ctggcaacca gctctcttgc
     1261 gagaacgctc atcagatatc ttgtcgcacc tgtcttgact tccagttgcc gtaacgtctc
     1321 acgcccactc cggcgtacga gttcaacaac ctgcccttta attttttccc gctcttcttg
     1381 tgtaaaaact tttgccacaa gccctcctga aaattacctc atgaccagaa attaacactt
     1441 accccctgaa gcccggcgga atttcggtat ccggctcaga aatatgattc acacaacgct
     1501 gtacagacga acgccccagg cggataacca gttcatccca tttttcgcga agctttgacg
     1561 gactcatgat attttttacc cagaatggat cccgctgcac ccgaccaaac atttcacaaa
     1621 tttgtctgtg agttctgcca tccagcatcc gcattgtgcg cacgtcgttg gcccatgcgg
     1681 tccagttggg ttctttcggt cgcgaaatct cgccatcatc gctggcggcc tgctcgtaaa
     1741 gactcacgat tcgcccccag atccactgcg cacacgccaa atcttcctgg ctgccccact
     1801 ggcgtttttt cgcactgaac acaaccgcgt cagggtgtcg ggttaaaaaa tcctgttcaa
     1861 ccgtctgcgg gtccggttgc gaagcttccg gacgagaagt ctttttattc tctgtagtaa
     1921 tctctgttgt attctctgta agatcatcag gccattttga cccgatgaca ttgagtcgtt
     1981 ttgaaccaat ggagcgtttc attttgacct cttccatcgt gtcattttga cctgatggag
     2041 cggcgcattt taaaccgatg gattcgctca atttgccacc atctaaaagc tcgctcccgt
     2101 agttgatcgt gtagaaattg gtcatatcgc gctttgattt attgagcttt tcacaacgca
     2161 aaagccccag cgttttcaga cttgcaaacg cgcgctttaa cgttgactct gaccagaatg
     2221 ggaactgttc cagccattgt tccgttgtgt tataaatcca gcgaacacca tcacattcca
     2281 tgccggagtt ggtatctctc aaccagtagt gcagttgttg caaaacaatg gcttcgttta
     2341 agccaatttt cattgccagc tgcgtgttta taaccagtgg gcgttcagca aaaagaagac
     2401 tcataattcc atccagcttt ttgttggtat tgctgtcgat acgcaagctt gaaagcaatt
     2461 gctttttcta taagttcgtc agtttcacga tctacaacgg caggatctgc aaaaagcagt
     2521 ccggattcca ccacatcgcc atattcttta tttaacccgg cgatcatgta cgtaatactt
     2581 tttccatcac tgatctcacg atacaacctg aaatcactaa tccggatagc ctccataatc
     2641 gcaggcacta gcgccctgaa cttttcacgc ttatccctgg tgtcgatagc cttccagcgt
     2701 tcgaatatct tcactcgatt aacgccaagc gctcgctgat caaccgcgcc accttcatct
     2761 gtgacacgct gaacatcgat gttcgggcgc tctttcaaag cccagaatgc ttcagtgatt
     2821 aatatcgtcg cctgctcctg tgtcattcct ggtcgacata tccaggcatc cagagcctca
     2881 cgagcctgtt caggagtgat tttcattgtt caaccgcccc gcccgcttcg tcttacgata
     2941 ttcatcataa actttgggat catactgaag ctccccgcca gatgcctcct gtagacgcat
     3001 cgcgcgacct tcgggaacta aatccccttt ccagctataa agcgaagcca aacgaatacc
     3061 tgctgcttgt gcaagttttg tttttgaacc gaaatacaaa agagcgtcag ttttaagcat
     3121 ttaaaacacc tttattgtta gttatgacta acaaaataga tgttaacaaa aacatagtca
     3181 atacgattta gcattagcta actatggaaa caaaaaattt aactatcggc gaacgcatta
     3241 ggtatcgtcg gaaaaacctc aaacacaccc aaaggtctct tgctaaagcc ctgaaaatct
     3301 cccatgtgtc tgtatcacaa tgggaacggg atgatagtga acctacaggg aagaaccttt
     3361 ttgccctcag caaagtattg caatgctcac caacatggat tctatttggc gatgaagaca
     3421 agcaaccaac accacctgtt gagaagccag ttgccttatc ccccaaagaa ctagagctcc
     3481 ttgagctgtt taatgcactg ccagaatcag aacaggatac ccagctcgcc gaaatgcgag
     3541 ctcgagtaaa aaacttcaat aaactctttg aagaattact aaaagcccgt cagcggacaa
     3601 ataaaagata acatcatcaa tgagttattt tttaccacat caatcatgtt agccataaca
     3661 tacaaaatca cttgacctat atgttagcca tggctaatct tatttgcatc aacataccgc
     3721 acggtgttct cagcaaacag ttccgctacc ccagcgttaa ggggaaatga ggtcagcatg
     3781 gatactatcg atcttggcaa caacgaatct ctggtgtacg gcgtgttccc caaccaggac
     3841 ggcacgttca ccgcgatgac gtataccaaa agcaaaacgt ttaaaaccga aaatggtgcc
     3901 cgtcgctggc tggaaagaaa ctcaggtgag tgatatggat ttcgacacaa tcatggaaaa
     3961 ggcttacgaa gaatacttcg aaggccttgc cgaaggcgaa gaagctctca gcttcagtga
     4021 gtttaaacag gcactcagaa taagaatgtg ctctcacaat gacgcggagc acaaatatga
     4081 gaagcaaaat cagaccgcag aaaattttgt tctggaaccc ggagaaacgc ttttcaaaat
     4141 tcccgttacg tgccccattt gcggttttac atcagaagaa cttgacgact cctgtaacaa
     4201 tcaggaaaca accaagtatg tcgaagatga taccgagtgc gcacgaagaa cgattatatc
     4261 cacgagtcca aactccagga ccaataaatc tcactttgag agggtgatta atccactccc
     4321 ccaaaccaat aaaaaagatg ccggaggaca aaaaacccaa tggaacaacg ggatatctgt
     4381 caaaaaaaga cgttccatta aagacaaaca acgcagcgcc aacaactgta agcgctttat
     4441 accagtaatc aattttcatg ttcttaagcg gatttattgg tggttgcgac attgcttaat
     4501 gaatccttaa aactgtggtg attttaagga taccacctcg cctgacgtgg ttaaaagcag
     4561 gcacacaaca cgaaagcgca cggcgaagtt cgtctcactg tacggtgtcg ttaaatttaa
     4621 ttcgaccgtg cgcttccggt tgtggcaacc cgcgaaatgg cgcggcggta agtatggcgg
     4681 ggttattcct tccccgttga ggacaccgag ttgtcaggtt gaccatacgc ttaagtgaca
     4741 accccgctgc aacgccctct gttatcaatt ttctggtgac gtttggcggt atcagtttta
     4801 ctccgtgact gctctgccgc cgtttttaaa gtgaattttg tgatgcggtg aatgcggcta
     4861 agcgcacgcg gaacagttaa aaccaaaaac agtgttatgg gtggattctc tgtatccggc
     4921 gttaattgtt aactggttaa cgtcacctgg aggcaccagg cactgcatca caaaattcat
     4981 tgttgaggac gcgataatga aaacgttatt accaaacgtt aatacgtctg aaggttgttt
     5041 tgaaattggt gtcactatca gtaaccctgt atttactgaa gatgccatta acaagagaaa
     5101 acaagaacgg gagctattaa ataaaatatg cattgtttca atgctggctc gtttacgtct
     5161 gatgccaaaa ggatgtgcac aatgaattca gcatttgcgc ttgttctgac agtttttctt
     5221 gtttccggag agccagttga tattgcagtc agtgttcaca ggacaatgca ggagtgtatg
     5281 actgcagcaa ccgaacagaa aattcccggt aactgttacc cggtcgataa agttattcac
     5341 caggataata acgaaatccc ggcaggtctt taaaacagtt ccgtaataaa catccgattt
     5401 cattcttata tgccagcaat ggcagggatt tgttcaccct taaatctgta atgaggtaaa
     5461 acaaaatgag taaagtcttt atttgcgccg ccattccgga cgaacaggca ataaaggaag
     5521 aaggtgccgt cgctgtagcc actgccattg aagccggtga tgaacgtcgc gcccgcgcaa
     5581 aatttcactg gcaattcctg gaacattatc cggctgctca ggactgcgct tataaatttc
     5641 ttgtttgcga ggataaaccc ggtatacccc gccctgccct cgattcctgg gatgctgaat
     5701 atatgcagga aaaccgctgg gatgaggcgt ctgcttcctt tgtcccggtc gagactgaat
     5761 ccgatccgat gaacgtcact tttgacaacc tagcccctga agtacagaac gctgtcatgg
     5821 ttaagttcga cacatgtgaa aacatcactg ttgatatggt gattagcgca caggaattgt
     5881 tgcaggaaga catggcaaca ttcgacggcc atatcgttga agcgttgatg aaaatgccag
     5941 aagttaacgc tatgtatccg gagcttaagc tgcatgccat cgggtgggtt aagcataaat
     6001 gtaagcctgg tgccaaatgg cccgaaattc aggcagagat gcgcatctgg aaaaaacgtc
     6061 gcgaaggtga acgcaaggaa gccggaaaat acacgtctgt tgttgatctc gcccgcgcca
     6121 gagccaatca acagcacact gaaaattcaa caggaaaaat caacccggtc attgctgcca
     6181 ttcatcgcga atacaagcag acatggaaaa cactggatga cgaactggcc tacgctctct
     6241 ggcctggtga tgtggatgcc ggaaacattg acggcagcat ccatcgctgg gcaaaaaatg
     6301 aagttatcga caacgaccgc gaagactgga agcgtatctc ggcatcaatg cgcaaacagc
     6361 ctgatgccct tcgctacgac cgccagacta tttttggcct tgtccgtgaa cgtccgatcg
     6421 acattcacaa agaccctgtg gcactgaaca aatacattac tgaatacctg actacaaagg
     6481 gcgtgtttga agatgaagga acaaatcaga gcgcaactga tactctctcg tcgccagtac
     6541 cagaaactga tgcagtggaa acggcaattc cagacaacga aaaaaccgaa tgcaaagtgg
     6601 aagtcgaacc atctgtagaa cgtgaggggc cgttctactt cctcttcacc gacaaggatg
     6661 gcgaaaaata cggtcgcgca aataaacttt ctggtctgga taaggcgctg tctgctgggg
     6721 ctactgaaat cacgaaagaa gaatatttcg cccgcaaaaa cggtacatac tcaggttcac
     6781 aacaaaatac tggtgcatct gacacgaccg cacaaccagg gtcagtaaaa gttaccgctg
     6841 acgaagtaaa caaaattatg caggcagcca atatcagcca gcctgacgcc gatgaactgc
     6901 ttgcagtatc acgtggtgaa tttgttgaag ggattagcga cccgaatgat ccgaaatgga
     6961 ttaaggggat ccagacccgc gattctgtga accagaacca gcaagaaacg gaacagaacg
     7021 accagaaagc ggaacaaaac agcccaaata cgcaacaaaa cgagccagaa acgaaacaac
     7081 ctgaaccagt agtgcaacag gaaccggaaa agatctgcac cgcctgcggt cagagcggtg
     7141 gcggcaactg ccctgattgt ggtgcggtga tgggtgacgc aacataccag gaaatattcg
     7201 atggagagaa tcagcctgaa gttcaggaaa atgatccgga ggaaatggaa ggcactgcgc
     7261 atcagcacaa ggagaacact ggcggcaatc agcatcatgc cagcgatagt gaaactggcg
     7321 aggcgtcaga tcccttaatt aaggcaaacg gtcatcataa tctcacatcc accagcagag
     7381 cggggattca tctgatgatc gaccttgaaa ccatgggaaa aaatcccgat gccccgatta
     7441 tctcaatagg tgcaatattt ttcgatccgc aaaccggaga tatgggaccg gaatttagta
     7501 agactatcga tctggaaact gctggcggag tcattgatcg ggacaccatt aaatggtggc
     7561 ttaaacaatc acgcgaagcg caatctgcca ttatgaccga tgaaatcccg ttagatgatg
     7621 cactgttaca attgcgggaa tttatcgacg aaaactccgg tgaatttttt gttcatgtct
     7681 ggggaaatgg agccaacttc gacaacacga ttttgcgccg ttcatacgaa cggcagggga
     7741 tcccctgccc gtggcgttac tacaacgatc gcgatgtacg cacaatcgtt gagctgggga
     7801 aagccataga cttcgatgcc agaacggcta ttccattcga aggtgagcgc cataatgcac
     7861 ttgatgacgc ccgttaccag gcaaaatacg tttcagctat ctggcaaaaa ctgatcccga
     7921 gtcaggctga ttcttaatgt tcaactgtcg ccggttgtga ctggtattct gcaaccggcg
     7981 ctcgtctgat gtaagagata aagaaatcga tgagcgaagt aatcatgatt gtctctcccg
     8041 gcaaatgggt atccgaagag cagttaattg cgctgaaagg aataaaaaaa ggtacgttaa
     8101 aaaaggcccg ggaaaaatcg tttatggaag gaagggaata taagcatgtc gctcatgacg
     8161 gtatgccatg ggataacagt ccatgctttt acaacctgga agaaattgat cgctggattg
     8221 agcgccaggc atcagcaaga ccaagacgtc atcttacttg actaaaagcc acactaacta
     8281 atgagagaag ttgaaatgaa atatccgaca ggcgtggaaa accatggagg gaaattacgt
     8341 atctggtttg tttataaagg cgtaagagtc agggaaaatc tgggggttcc tgacacagca
     8401 aaaaacaggc gcgttgcagg tgaactacgc tcctctgttt gttacgcaat aaaaactggt
     8461 gttttcgact atgcaaaaca gtttccctcc tcacgcaatc tggaaaaatt tggtgaggcc
     8521 cgacaagatt taaccataaa agaactggct gaaaaatttc tggcactgaa agaaactgaa
     8581 gtcgccaaaa catcactcaa cacataccgt gccgtcatca aaaatatcct gagcataatc
     8641 ggtgaaaaaa atcttgcctc atcgattaat aaagaaaaat tactggaggt tcgtaaagag
     8701 ctactgactg gataccagat ccccaaaagt aactatattg ttacacaacc agggagatcg
     8761 gctgtaactg taaataatta catgacaaat cttaacgccg tgttccagtt tggtgttgat
     8821 aacggttacc tggcagataa cccgtttaag gggatctcgc cattaaagga atcaagaacc
     8881 attccggatc ctctttcgcg ggaggaattc atccgtctta tcgatgcgtg cagaaatcag
     8941 caagcaaaaa atttatggtg tgtttctgtt tatactggcg ttcgccctgg tgagctgtgt
     9001 gcacttggat gggaggacat agatctgaaa aatggaacaa tgatgatcag gagaaattta
     9061 gcaaaagacc gtttcacggt accaaaaaca caggcgggaa ccaatcgggt cattcatctt
     9121 attaagccag caatcgacgc tctccggagt cagatgacat taacgagact gagcaaagag
     9181 catatcattg atgttcacct cagagagtat ggcagaacag aaaaacaaaa atgcaccttt
     9241 gtttttcaac ctgaagtgtc agcgagagta aaaaattatg gtgaccattt taccgttgac
     9301 tcaataaggc agatgtggga cgcagcgata aaacgtgccg gactccgcca tcgaaaatca
     9361 tatcagtcga gacatactta tgcctgctgg tcgctgacag ctggtgctaa cccggcattt
     9421 atagcaaacc agatgggcca tgcagatgcg caaatggtat ttcaggtata cggaaaatgg
     9481 atgtctgaca acaataatgc acaggtagct ttgttaaata cacagttaag cgagtttgcc
     9541 ccaaccatgc ccc
//
LOCUS       DAPGWB010000167         8981 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.169, whole genome shotgun sequence.
ACCESSION   DAPGWB010000167 DAPGWB010000000
VERSION     DAPGWB010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8981
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.169"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            103..375
                     /locus_tag="RHX79_003917"
     CDS             103..375
                     /locus_tag="RHX79_003917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3811 domain-containing protein"
                     /protein_id="HDV2199032.1"
                     /translation="MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKK
                     EYIDKLMVEREAEAKKARQLKKKQAYKPDPEASFSWSANTSTRGRR"
     gene            complement(376..1248)
                     /gene="rluF"
                     /locus_tag="RHX79_003918"
     CDS             complement(376..1248)
                     /gene="rluF"
                     /locus_tag="RHX79_003918"
                     /EC_number="5.4.99.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2604) synthase RluF"
                     /protein_id="HDV2199033.1"
                     /translation="MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGD
                     QVKPGDIVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFP
                     IGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPIL
                     GTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPL
                     GEWRDLTDDELIDLFKLIENSSSEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASN
                     GKRFTSPGRKKKGR"
     gene            1460..2149
                     /gene="pepE"
                     /locus_tag="RHX79_003919"
     CDS             1460..2149
                     /gene="pepE"
                     /locus_tag="RHX79_003919"
                     /EC_number="3.4.13.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepE"
                     /protein_id="HDV2199034.1"
                     /translation="MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQ
                     TWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGL
                     LAPITNVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTN
                     ALPEGHKGETREQRIRELLVVAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGE
                     EAVPLEAGHRF"
     gene            complement(2240..3871)
                     /locus_tag="RHX79_003920"
     CDS             complement(2240..3871)
                     /locus_tag="RHX79_003920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HDV2199035.1"
                     /translation="MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKK
                     PLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTF
                     DLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGV
                     QVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTATLTAAGIISFPVALCLVIGANL
                     GSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVI
                     YFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSALDTPTLALAN
                     AARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYLARMPKEE
                     LAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELDALYEQ
                     LLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRRYSHAHVDRLHQQNVQSIETSSL
                     HLGLLGDMQRLNSLFCSVAYSVLEQPDEDEGRDEY"
     gene            complement(4091..7774)
                     /gene="metH"
                     /locus_tag="RHX79_003921"
     CDS             complement(4091..7774)
                     /gene="metH"
                     /locus_tag="RHX79_003921"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDV2199036.1"
                     /translation="MSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFAD
                     WPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAE
                     INFAAAKLARACADEWTARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLV
                     AAYRESTKALVEGGADLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDA
                     SGRTLSGQTTEAFYNSLRHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAG
                     LPNAFGEYDLDADTMAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLP
                     EIPVACRLSGLEPLNIGEDSLFVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVE
                     NGAQIIDINMDEGMLDAEAAMVRFLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQG
                     KGIVNSISMKEGVDAFIHHAKLLRRYGAAVVVMAFDEQGQADTRARKIEICRRAYKIL
                     TEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSNVS
                     FSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAGQLAIYDDLPAELRDAVEDVILNRR
                     DDGTERLLELAEKYRGSKTDDTANAQQAEWRSWEVNKRLEYSLVKGITEFIEQDTEEA
                     RQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEASK
                     EQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNA
                     DLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVY
                     VQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHGRKKPRTPPVTLEAARDNDF
                     AFDWQAYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWSLAGKYPRILEDEVVGVE
                     AQRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYRDETRTHVINVSHHLR
                     QQTEKTGFPNYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADAFEAQHDDYNKIMV
                     KALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRPAPGYPACPEHT
                     EKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQVEDYA
                     RRKGMSVTEVERWLAPNLGYDAD"
     gene            7974..8798
                     /gene="iclR"
                     /locus_tag="RHX79_003922"
     CDS             7974..8798
                     /gene="iclR"
                     /locus_tag="RHX79_003922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418442.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate bypass operon transcriptional
                     repressor IclR"
                     /protein_id="HDV2199037.1"
                     /translation="MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSV
                     ALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLL
                     AIVHPILRNLMEESGETVNMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASG
                     AGKAFLAQLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHAL
                     GLRCLAACIFDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR"
BASE COUNT         2091 a         2470 c         2301 g         2119 t
ORIGIN      
        1 aagaaagata aatatttaag aagagaacaa aggaatatta tcagttcagc tcgcaaacga
       61 attcccgtac actgaactct ctggctcact gagggcacca tcatggcact cccccgtatt
      121 acccaaaaag agatgactga acgcgagcag cgtgaactta aaacactgct ggatcgggcg
      181 cggattgcgc atggtcgcgt actgaccaac tccgaaacca acagcattaa gaaagagtac
      241 atcgataaat taatggtcga gcgtgaggct gaagcgaaaa aagcccgcca gttgaagaaa
      301 aagcaggctt ataaaccgga tcctgaagcg tcatttagct ggtcagcaaa tacgtcgacg
      361 cgcggcaggc gctgattagc gtcccttctt tttacgcccc ggcgaggtaa aacgcttacc
      421 gttggacgcc gggcgaccgc ctttttccgc cgttttttcc atcttaacga ctggacgttt
      481 gatgcccgct gttttcggtt tagccttcgc tttaggtttt acctcggaag aggaattttc
      541 aatgagttta aacaggtcga ttaactcatc gtcagttaaa tcgcgccact cacccagcgg
      601 aatgccgctt aaactgacgt tcataatgcg cgtacgttcc agctttttca cttcatagcc
      661 gaaatgctcg cacatgcgcc ggatctgacg gttcagcccc tgcaccaggg taatgcggaa
      721 gacaaacggc gcttcttttt tgactttgca ctttttcgtc accgtcccga ggatcggcac
      781 ccccgccccc ataccacgaa taaattcatc ggtaatcggt ttatcgaccg tcaccagata
      841 ctctttctca tgatcgttac ccgcacggag gatcttattc accagatcgc cgtgattggt
      901 gaggaaaatc agcccctggg agtctttatc caggcggcca atcgggaaca cgcgtttgct
      961 gtggttaacg aaatcgacaa tgttatcgcg ctcgccatct tcggtggtgc tgacaatacc
     1021 gacgggcttg ttcagggcga taagtaccaa atcttcggct tcccgaggct caatcaactg
     1081 accgtttact ttcacaatgt cgccgggttt cacctgatcg ccaatggtgg ctcgcttgcc
     1141 attaaggaac acattgcctt gctcgatata gcgatccgct tcgcggcgtg agcaaattcc
     1201 gctttcgctg atgtatttat ttaaacggac tgatgagtcg ggcagcataa attctcctgt
     1261 aaaaaacgga atataccgta cctttgggtt gataaaaaat agtcatgagc gaactatttg
     1321 ttatttccat tggcttgaat tcgttacctg ctcaaatcac tttccagaag caatgtgcga
     1381 catcgtgagc catgtcagta agtggttaaa ttcgcagtgg tagcatgcct cccgtgattt
     1441 cttactaacc ggagaagtaa tggaactgct tttattgagt aactcgacgc tgccgggtaa
     1501 agcctggctg gaacatgcac tgccgctaat tgctgaacag ttgcagggtc gccgctcagc
     1561 ggtgtttatc cctttcgctg gcgtaacgca gacctgggat gattacacag cgaaaacggc
     1621 tgcggttctc gctccgctgg gtgtttctgt caccggtatt catagcgttg tcgatcccgt
     1681 tgccgcgatt gaaaatgctg agatcgtgat tgtcggcggc gggaatactt tccagttgct
     1741 gaaacagtgc cgcgagcgcg ggctgctggc accaattact aacgtggtta aacgtggcgc
     1801 tctgtatatt ggctggagcg caggcgctaa ccttgcttgc ccaaccattc gtaccaccaa
     1861 cgatatgccg attgtcgatc cgcaaggttt cgatgcgcta aatctgttcc cgttgcaaat
     1921 caacccgcac ttcaccaacg cgctgccgga aggccataaa ggtgaaaccc gtgagcagcg
     1981 tattcgcgaa ctgctggtcg tcgcgccaga actgacgatt attggtctac cggaaggtaa
     2041 ctggatcaca gtgagtaaag gtcacgctac gctgggtggc ccgaacacca cttatgtgtt
     2101 taaggctggt gaagaagcgg tgccgctaga agctggtcac cgtttttaag tgaattgccg
     2161 gatgcatgat ccggcatctt gttcatagtg cctgatgcga cgcttgacgc gtcttatcag
     2221 gcctacagga ttcacaatat taatactcgt cccgtccttc atcttcatcc ggctgttcca
     2281 gcacactgta agccaccgaa caaaacagcg agttcaggcg ctgcatatct cccagtaagc
     2341 ctaaatgtag cgaactggtt tcaatgctct gcacgttttg ctgatgcagg cgatcgacgt
     2401 gggcgtggga atagcggcga ttaagaatgc gaaagcgatg cttactacgg cgcaaacgac
     2461 gagcgctggt gacatcgcca gagaagaaca ccgacattgc cagttttaaa ttactgagca
     2521 attgctcata gagcgcatcc agttccttca agccatcaag cgaaaatgcc cgccgtgctg
     2581 ccagcgattt atcggcaatt tcgctgccca tgcgctcgac gatatcggaa gcctgttcaa
     2641 ggttgagcga catttcaata atctccgccc agcgacgcga ctcttcttct gccagttcct
     2701 cttttggcat ccgcgccaga tacagcttaa tggcggtata gagaacgttg atatcatctg
     2761 ccagcttacg cagctctttc tcctgccgtg gctcgccgtg catcacttta ttcagccctt
     2821 ccatcatctg ttccatggcg tcgccaatgc gcagggtttc gcgcgcggcg ttcgccagag
     2881 caagcgtggg cgtatccagc gcgctgacat ccagatgttt aggccgtagc tgggtatcca
     2941 gttccggttc atcgcgaata atcgttttgc aaaaccgtgc catcgggtca acaaatggca
     3001 gcatgaccag gcaacgtaca aggttgtaga agacgtggaa atagatcacc agttccgctt
     3061 ttggcaatga caacttcccc attgtctctg ccagcaaatg gacaaacggc aggataatca
     3121 ggctacccac cagcttaaac agcaaactac ccagcgcgac acggcgggct gcggcattgg
     3181 cggcactgtt gttgagcatc gccagcaggc cggaaccgag gttagcacca atcaccagac
     3241 agagcgccac ggggaaggag ataatgcctg cggcggtcag agtcgcagtc agcagtacag
     3301 cagcaaggct ggagtagctg ataatggcga acatcgcgcc aatcagcgca tccagcagaa
     3361 tatcgccggt cagcgaggca aagatcacct gaacgccgtt tgcctgggtg atcggcgtta
     3421 cggcctgcac aatcaactcc agcgccagca aaatcagccc aagaccaata ccgacgcggc
     3481 ccagttgccc ggcgcgtgac tgtttgcgtc cgaggaaaaa aatcacgccg ataaaaataa
     3541 gtaacggtga cagccaggat aagtcgaagg tgagaatacg cgccattagc gccgtcccga
     3601 catctgcacc cagcacaatg accagagccg gtgcgagggc taccagatcc tgagcgacaa
     3661 acgaggtcac cagcatggtg gtggcattac tgctctgcac cagtgcggta acgccgatcc
     3721 ccgcgcaaaa ggcgagcggc tttttttcga cgctccggct aaggacagta cgcaaacgcg
     3781 cgccgaagac gcgcattacg ccggttcgaa caatatgagt cccccagacc agcagggcga
     3841 cggcagaaag caggtgaagc agcgttaaca cgagttcagg ttctccttat cgttatatgt
     3901 gcctgaagca attgaatgac caaaggaccg gaaacacgct gactggcatc tttactgtgc
     3961 cttttgacat tcgtttttcc ggctaagatt attccagcct gtttccagta taagtgtttc
     4021 atattaataa agagacaggg cactcattga gcgccctgtt tgttgtaagg aaaagtgaca
     4081 gatttgtgaa tcagtccgcg tcatacccca gattcggtgc cagccagcgc tcaacttcgg
     4141 taacgctcat acctttacgg cgggcataat cttcaacctg atcgcgctga atttgtgcta
     4201 cagcgtagta cttgctgtcc gggtggctga agtaccaacc cgaaaccgat gcaccgggcc
     4261 acatggcgaa agattctgtg agtttcatgc cagtgtgttt ttccacttcc agcagctccc
     4321 agatggtggc tttttccgta tgttccgggc aggccggata gcccggtgcc ggacggatgc
     4381 cctggtagtt ttcgcggatc agttcttcgt tgctgaggtt ctcgttcggc gcatagcccc
     4441 agtagacttt acgcacacgc tcatggagat actccgcaaa ggcttccgcc agacggtcgg
     4501 caagcgcttt caccatgatt ttgttgtaat catcgtgctg cgcttcaaag gcatcagcca
     4561 gtgcgtcctc ttccagcccg ccagtcacgg caaatgcgcc gatgtaatct gctttaccag
     4621 aaagcttcgg cgcaacgaag tcagcgagac agtagttagg gaatcccgtt ttttcggtct
     4681 gttgacgcag atggtggctg acgttgatca catgggtgcg cgtttcgtca cggtagattt
     4741 caatgtcatc gcccacacgg tttgccggga acaggcccac cacgccacgc ggattcagcg
     4801 ttttctcggc gcttaattta tccagcatgt cgttggcgtc tttaaacagc cgctgcgcct
     4861 caacgcccac cacttcatct tccagaatgc gcggatactt cccggccagc gaccaggtca
     4921 taaagaacgg tgtccagtcg atgtaattac gcagagtttc gatgctggct tcaacttcct
     4981 gcacgccgag acggtgcgcc accggcggcg tgtaagcctg ccagtcaaaa gcgaaatcgt
     5041 tatcgcgcgc cgcttccagc gtgaccggtg gtgtgcgcgg tttcttacgc ccgtgctgaa
     5101 tacgtacggt ttcgtactcc ttgcgggtac gagcgacaaa atcatcacgc tgagtatcgg
     5161 aaagcagcgc cgccaccaca ccaacggtgc gcgatgcgtt ctgtacatac accgtcgggc
     5221 cgctgtagtt ctgctcaatt ttcaccgccg tgtgcgcttt tgaggtcgtc gcgccgccaa
     5281 tcaatagcgg gatggtgaag ccctgacgct ccatctcttt cgccacgtta accatctcgt
     5341 ccagcgacgg cgtgataagc cccgaaagtc caatcagatc agcattcact tctttagcgg
     5401 tacggagaat tttttccgca ggcaccataa cgccgagatc gacaatttcg tagttgttac
     5461 attgcagcac cacgccaacg atatttttac cgatgtcgtg gacatcgcct ttcacggtgg
     5521 cgatcaccat cttgccgttg gttttaccct gctctttgct ggcttcaata aacggttcga
     5581 gatacgccac tgcctgtttc atgacgcgcg ccgatttgac cacctgtggc aggaacattt
     5641 tcccttcgcc aaacagatcg ccgaccacgt tcataccgtc catcagcggg ccttcaatca
     5701 cttcaatcgg gcgcgtagcc tgctggcggg cttcttcggt atcctgctcg ataaactcgg
     5761 taatgccttt aaccagcgag tattccagac gtttattcac ttcccacgag cgccactccg
     5821 cctgctgggc gttagcggtg tcgtcggttt tgctgccgcg atatttctcg gcaagctcca
     5881 gtaaacgctc agtgccatcg tcgcgacggt taagaatcac atcttccacc gcgtcgcgca
     5941 gttcagcggg taggtcgtcg taaatcgcca gttgcccggc gttgacgatc cccatatcca
     6001 tgccattgcg aatagcgtag tagaggaaca ccgcgtgaat ggcttcgcgc accggatcgt
     6061 tgccacggaa tgagaaagaa acgttagata caccgccgga aatcagcgcg tgcggcagtt
     6121 cgcgtttgat atcttcacac gcgccgataa agtcctgcgc gtagttgttg tgctcttcaa
     6181 tgccggttgc gaccgcgaag atgttcgggt cgaagatgat atcttctggc gggaagccaa
     6241 cctcttcggt gaggattttg tacgcccgac ggcaaatctc gattttccgt gcgcgggtat
     6301 cggcctgtcc ctgttcgtca aaggccatta ccaccactgc cgcaccgtaa cgacgcaaga
     6361 gcttcgcgtg atggataaag gcgtcgacgc cctctttcat cgagatagag ttaacaatgc
     6421 ctttgccctg gatacacttc agaccttttt caatgacatc ccattttgag gagtcgatca
     6481 taatcggcac gcgagcgata tccggttcac cggcaatcag attgagaaaa cgcaccatcg
     6541 ccgcttcggc gtcgagcatc ccttcatcca tgttgatatc gataatctgc gcaccgtttt
     6601 ccacctgctg gcgggccaca tccagtgcct cgctgtattt ctcttctttg atcaggcgct
     6661 tgaacttagc ggaaccggtg acgttggtgc gttcacccac gttcacaaac aggctatctt
     6721 cgccaatgtt cagcggctcc aggccggaca aacggcaggc tacggggatt tccggcagtt
     6781 tgcgcggcgc taatccttct actgcacgac tcatcgctgc aatatgttgt ggcgtggtgc
     6841 cacagcagcc gccgacgata ttgagaaaac ccgcttgcgc ccattcacgt atctgttttg
     6901 ccatcgtgtc ggcgtcgaga tcgtactcac caaaggcgtt gggtagcccg gcgttcgggt
     6961 gcgcggtgac gtagcattcc gcaatccgtg acagctcctg cacgtactgg cgcagttcat
     7021 cgggccccag cgcacagttc aggccaaagg tcagagcttc ggcgtggcgc aatgagttgt
     7081 aaaatgcttc ggtggtctgc ccggagagcg tgcgcccgga ggcgtcggtg atggtgccgg
     7141 agatcataat cggcagctca acgcccagcg cttcaaactc cgttttcacc gcaaaaaccg
     7201 ccgctttggc gttaagggtg tcgaaaacgg tttcaatcag gatcagatcc gcgccacctt
     7261 ccaccagcgc tttggtggac tctcgataag ccgccaccag cccgtcaaaa gtgatattac
     7321 gaaatgccgg atcatttacg tccggagaaa tagacgccgt gcggttggtc gggccgagaa
     7381 caccggcaac gtagcgcggt ttctccggcg tgcgcgcggt ccactcatca gcacaagctc
     7441 gcgccagttt cgccgccgca aagttgattt ccgccgacag ggattccatc tggtaatccg
     7501 ccatcgcaat ggtcgtggag ttgaaggtgt tggtttcgat gatatccgcg cccgcttcaa
     7561 agtaggcgtt gtggatagcg gcgatcactt ccggtttgct gagcaccagc aggtcgttgt
     7621 tgcctttgag atcgcatggc cagtcggcaa agcgttcacc acgaaaatcg gcttcgttca
     7681 gtcgatagct ctggatcatg gtgcccatac cgccgtccag caccagaata cgttcattta
     7741 actgcgcacg cagttgttcc actttgctgc tcacacttgc tcccgacacg ctcaacccag
     7801 atttaataaa aattcaacaa accatactgg cataaacgca tctgtggtaa aagcgaccac
     7861 cacgcaacat gagatttgtt caacattaac tcatcggatc agttcagcaa ctattgcatt
     7921 agctaacaat aaaaatgaaa atgatttcca cgatacagaa aaaggaggct gtcatggtcg
     7981 cacccattcc cgcgaaacgc ggcagaaaac ccgccgttgc caccgcacca gcgactggac
     8041 aggttcagtc tttaacgcgt ggcctgaaat tactggagtg gattgccgaa tccaatggca
     8101 gtgtggcact cacagagctg gcgcaacaag ccgggttacc caattccacg acccaccgcc
     8161 tgctaaccac gatgcaacag cagggtttcg tgcgtcaggt cggcgaactg ggacattggg
     8221 caatcggcgc acatgccttt atggtcggca gcagctttct ccagagccgt aatttgttag
     8281 cgattgttca ccctatcctg cgcaatttaa tggaagagtc tggcgaaacg gtcaatatgg
     8341 cggtgcttga tcaaagcgat cacgaagcga ttattatcga ccaggtacag tgtacgcatc
     8401 tgatgcgaat gtccgcgcct atcggcggta aattgccgat gcacgcttcc ggtgcgggta
     8461 aagccttttt agcccaactg agcgaagaac aggtgacgaa gctgctgcac cgcaaagggt
     8521 tacatgccta tacccacgca acgctggtgt ctcctgtgca tttaaaagaa gatctcgccc
     8581 aaacgcgcaa acggggttat tcatttgacg atgaggaaca tgcactgggg ctacgttgcc
     8641 ttgcagcgtg tattttcgat gagcaccgcg aaccgtttgc cgcaatttca atttccggac
     8701 cgatttcacg cattaccgat gaccgcgtga ccgagtttgg cgcgatggtg attaaagcgg
     8761 cgaaggaagt gacgctggcg tacggtggaa tgcgctgact ttttctggcg ggcagaggca
     8821 atattctgcc catcatacct gagtggcaat agaataaggg tgtctgttaa tcgtattgac
     8881 gccagaataa cttaatgtca tacacttcac acacttttat taactcggca ttatttttaa
     8941 acatcaaacc actttaatta ttaacaaaat cgcaagatct c
//
LOCUS       DAPGWB010000168         8841 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.170, whole genome shotgun sequence.
ACCESSION   DAPGWB010000168 DAPGWB010000000
VERSION     DAPGWB010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8841)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8841)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8841
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.170"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..165)
                     /locus_tag="RHX79_003923"
     CDS             complement(<1..165)
                     /locus_tag="RHX79_003923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel protein MscS"
                     /protein_id="HDV2199038.1"
                     /translation="MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHA
                     VQFLIYTIIIS"
     gene            409..666
                     /locus_tag="RHX79_003924"
     CDS             409..666
                     /locus_tag="RHX79_003924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2534 family protein"
                     /protein_id="HDV2199039.1"
                     /translation="MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIP
                     LSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGEEQ"
     gene            complement(716..1666)
                     /gene="uspE"
                     /locus_tag="RHX79_003925"
     CDS             complement(716..1666)
                     /gene="uspE"
                     /locus_tag="RHX79_003925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspE"
                     /protein_id="HDV2199040.1"
                     /translation="MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF
                     SYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQ
                     EVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV
                     NLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYN
                     DAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGI
                     SAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVELDDEEDD"
     gene            complement(1818..2570)
                     /gene="fnr"
                     /locus_tag="RHX79_003926"
     CDS             complement(1818..2570)
                     /gene="fnr"
                     /locus_tag="RHX79_003926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007849744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HDV2199041.1"
                     /translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN
                     IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD
                     AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL
                     LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF
                     QKSGMLAVKGKYITIENNDALAQLAGHTRNVA"
     gene            complement(2765..3280)
                     /gene="ogt"
                     /locus_tag="RHX79_003927"
     CDS             complement(2765..3280)
                     /gene="ogt"
                     /locus_tag="RHX79_003927"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDV2199042.1"
                     /translation="MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDI
                     HYRKEGYERISATNPGGLSDKLRDYFSGNLSIIDTLPTATGGTPFQREVWKTLRTIPC
                     GQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKE
                     WLLRHEGYLLL"
     gene            complement(3291..4817)
                     /gene="abgT"
                     /locus_tag="RHX79_003928"
     CDS             complement(3291..4817)
                     /gene="abgT"
                     /locus_tag="RHX79_003928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415852.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate transporter"
                     /protein_id="HDV2199043.1"
                     /translation="MSMSSIPSSSQSGKLYGWVERIGNKVPHPFLLFIYLIIVLMVTT
                     AILSAFGVSAKNPTDGTPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAG
                     LAERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVG
                     RHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMA
                     SSVVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAI
                     ALMVIPENGILRDPINHTVMPSPFIKGIVPLIILFFFVVSLAYGIATRTIRRQADLPH
                     LMIEPMKEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLA
                     LLSSFLCMFIASGSAIWSILAPIFVPMFMLLGFHPAFAQILFRIADSSVLPLAPVSPF
                     VPLFLGFLQRYKPDAKLGTYYSLVLPYPLIFLVVWLLMLLAWYLVGLPIGPGIYPRLS
                     "
     gene            complement(4851..6296)
                     /gene="abgB"
                     /locus_tag="RHX79_003929"
     CDS             complement(4851..6296)
                     /gene="abgB"
                     /locus_tag="RHX79_003929"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate hydrolase subunit AbgB"
                     /protein_id="HDV2199044.1"
                     /translation="MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLA
                     SALESAGFTVTRNVGNIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSATP
                     GENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGV
                     FDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSALDAVTLMT
                     TGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAK
                     IAEGAALMTETTVECRFDKACSSYLPNRTLENAMYHALSHFGTPEWNSEELAFAKQIQ
                     ATLTPNDRQNSLNNIAATGGENGKAFALRHRETVLANEVAPYAATDNVLAASTDVGDV
                     SWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTVNLFIDSGL
                     LQECQQEHQQVTDTQPYHCPIPKNVTPSPLK"
     gene            complement(6296..7606)
                     /gene="abgA"
                     /locus_tag="RHX79_003930"
     CDS             complement(6296..7606)
                     /gene="abgA"
                     /locus_tag="RHX79_003930"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate hydrolase subunit AbgA"
                     /protein_id="HDV2199045.1"
                     /translation="MESLNQFVNSLAPKLSHWRRDFHHYAESGWVEFRTATLVAEELQ
                     QLGYSLALGREVVNESSRMGLPDELTLQREFERARQQGALAQWIAVFEGGFTGIVATL
                     DTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGL
                     AHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPADTV
                     VCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHAIAPHSEGASRV
                     NVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVETRL
                     MGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQAS
                     YVVFGTQLAAGHHNEKFDFDEQVLAIAVETLARTALNFPWTRGI"
     gene            7782..8690
                     /locus_tag="RHX79_003931"
     CDS             7782..8690
                     /locus_tag="RHX79_003931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2199046.1"
                     /translation="MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELE
                     EGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEEIRQRQGQLAGQINIGMG
                     ASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE
                     FTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT
                     PQVGVVCETFSACISLVAKSDFLSILPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQ
                     RRDSRQTPLTASLITQFRRECGYLQS"
BASE COUNT         2252 a         2214 c         2198 g         2177 t
ORIGIN      
        1 actgataatt atggtgtaga ttaaaaattg caccgcatgg aataaaaaac cttttctttt
       61 acgatttccg cggcgaaacc aaaagctcat cagaatcaat gctgcgcagc taccgaaaat
      121 aatgaccaga ttaagcgcat tatttgtaaa cagttcagcg atcattgttt tatcaggctc
      181 ctccagataa ttgtcgtcat gccggaaacc cctggcgggg ctattttacc gcgacaattc
      241 attcagatca tcaatagtca gggaaggaag tagcaatatt agctaactaa tcaatgcgtt
      301 gattgtaaat ccagctaaga ggtgaggttt tcagagcaga caacggtgaa atgtcatggt
      361 attgttacgt ttaggtaaca agaaatttgt ctgcacaagg attacatcat gattatggcg
      421 aaactgaagt cagcgaaagg gaagaaattt ctctttggtt tgttggcggt tttcattatt
      481 gcggcgtcgg ttgtgactcg cgcgactatc ggcggcgtta tagaacagta caatattccg
      541 ctgtctgagt ggacgacatc aatgtatgtg attcagtcat cgatgatttt tgtttatagc
      601 ctggtcttta ctgtgttgct ggcaatcccg ttgggaattt atttccttgg cggcgaagag
      661 cagtaagtaa aaaataggcc cgataactcg ggccttgtca gttattgaag agtcgttaat
      721 cgtcttcttc gtcatccagt tcaacgggtg tctgatactg gtcaggttta atgaccaaca
      781 gatcgcagcg aagatgatca atcacctgtt ccgccgtgtt gccgaggaat gctgctgaaa
      841 taccggtgcg tcctaccgtg cccagaacca caatccccgc ctgtaagtgc tccgccaaat
      901 caggaatcac ctcttctggc agaccttttt ctacgtgcgt catgttttca ttaatgccga
      961 atttctgccg cagagctttc attgccagca aatgttgccc acgaatggca tcgttataaa
     1021 cgctcggatc aaattccggc agttcaatcg cgatattaat tggcgttacc ggataagcgc
     1081 caaccagatg aacttcggta tggttgactt gttctgccag ttcgatcgtc tctttgacca
     1141 gtttttcatt gagcgcatta tgatacggct cttcactggc gagattcacc gccaccagcg
     1201 ccttgcctcc ttccggccac ggctggtctt tcaccatcca caccgggctt gggcatttgc
     1261 gtaacagatg ccagtccgtt ggcgtaaaaa tcaccgcttc cagacggtca tgttggtgcg
     1321 ccatttttag caccaaatcg tgcccgccgc tgatcacttc ctgaatgatg gcttcgaagg
     1381 gacggttatg ccagaccact ttaatttcaa tgggaacgcc agcattgaga taatattttg
     1441 cctgctcgtg gatccaggct gtacgctggc tgatgacgcc ctgacgcata gcggtacgtt
     1501 cgtccgggga gagcagggtg gtcatttcgt atgagaagtc atagatcggc aaaaaggctt
     1561 taattttgcc accaatccgt tgatgtaaat aaacagctcg ccgcaatgct ggttggtcgt
     1621 cctggttagg atcgataaca acgagcatgt tctgatacat agccatacag ggtctcctta
     1681 caacaactgt caacgcagtt tgtaattaaa agattaaccc atatctggtg aatgaaacag
     1741 tgatgaacct tctgccagat caataaatca gaaaaattta atgatatgac agaaggatag
     1801 tgagttatgc ggaaaaatca ggcaacgtta cgcgtatgac cagcaagctg ggccagcgca
     1861 tcgttatttt cgatggtgat gtatttacct ttgactgcca gcatgccgct tttctggaag
     1921 cgacccagca gacggctgat ggtttctacc gtcaggccca gatagttacc gatatcgcca
     1981 cgagtcatcg tcaggcggaa ttcacgaggg gagaagccgc gttgggcaaa acgacgggac
     2041 aggttgtaga tgaatgcagc cagacgttcc tcggcatttt tcttcgacaa cagcaggatc
     2101 atgtcctgat cgcctttgat ttcaccgctc atcagacgca tcatctgctg acgcagattc
     2161 ggcattttac cggacaaatc gtccagcgtt tcgaacggga tttcacatac catcgaggtt
     2221 tccagcgcct gcgcgaagct cgggtgatgg ccgctgccga tggcgtcaaa tcccaccagg
     2281 tcgcctgcta aatggaaacc agtgatttgc tcgtcgcctt gctcagtgat ggtataactt
     2341 ttaatcgtac cggagcggat ggcataaagc gatttaagtt catcaccagc cttaaacagc
     2401 gtctggcctt tctgaatagg cttcttccgc tcaatgatat tatcaagctg atcaagctca
     2461 tgttcgttga gtgtgaacgg gatgcaaagc tggctgatgc tgcaatcctg gcaatggata
     2521 gcacaaccgc cagactgaat gcgccgtata attcgctttt ccgggatcat aggtctgctc
     2581 aagccgtaat tgatatttgt caattttaac atctttttag ggagcaagta agtctaagca
     2641 aaccttaaca gcagagaatt ccgatattag atgtaaatat atgtctatct atttgaaaac
     2701 ccttaagttg ttaagggtaa ctttacataa aagtgtgaac aagctggcac aaattgttta
     2761 atgtttacag caaaagataa ccttcgtggc gcaataacca ctcttttcgc tgaactccgc
     2821 ctgcatatcc ggtcatggtg ccgtttcggc caataacccg atggcaaggt acgacgatgc
     2881 tgatgggatt cgatccgttt gccgcaccaa cggcacgcgc cgcgccaggg cggcccaatt
     2941 gttcagccag ttggccgtaa tgcattacct gcccgcaggg gatagtgcgt agagttttcc
     3001 agacttcgcg ctgaaatggc gtcccccctg tggcagtggg aagcgtatca ataatgctaa
     3061 gattaccgga aaaataatca cgaagcttgt cgcttaaacc gcctgggttg gtggcagaaa
     3121 tgcgctcata gccttctttg cgataatgga tgtccagcag ctgcaccatg cgttcgctgt
     3181 actcttccca ttcaaccgcc cgcaggcgaa attgctcatc gcaaatcacc cacagtggac
     3241 ccagtggcgt ggcaattttt tcttcaagta atctcagcat ccgttctctc ttaagacaaa
     3301 cgtgggtaaa tccccggacc tatcggcaga ccaacaagat accacgccag caacatcagc
     3361 agccatacca ccaaaaagat aagcggatag ggcaagacta acgaatagta agtacccagt
     3421 ttcgcgtctg gtttgtagcg ttgcaggaat ccaagaaaca gtggaacaaa aggagatacc
     3481 ggcgctaaag gcaatacgga tgagtcggca atacgaaaga ggatttgcgc aaatgccggg
     3541 tgaaagccaa gtagcataaa cattggtacg aaaatggggg ccagaatcga ccagattgcg
     3601 gaaccgctgg caataaacat gcataagaaa gaggaaagca acgccagacc gacaaacgcc
     3661 gggatgccgc taagccctga actttcaagt atatcggtca gccccacggc gatgaatttc
     3721 cccatgttgc tccagttaaa catggcgaca aactgggcta ggggaaaaac catcacgata
     3781 aatcccgcca tctctttcat cggttcaatc attaaatgcg gtaaatccgc ctgacgtcga
     3841 attgtgcggg tagcgatgcc ataagccagc gagacaacaa agaaaaaaag aatgatcagt
     3901 ggcacgatac ctttaataaa gggtgatggc atcacggtgt gattaatcgg atcgcgcaat
     3961 atcccgtttt ccgggatcac catcagcgcg atcgcagcaa taaaaagtag cgatacgaca
     4021 cctgctatgc gtaaaccaaa acgctgactt tcggtcaatg tctgcagttt ctcatcgctg
     4081 tttccctgcc attgacctaa ccgtggctcg atgattttgt cggttatcag gccgccaaca
     4141 atcgtcagta cgactacgga gctggccata aaataccagt tatcaattac actgacgtgc
     4201 atttgcggat tgaacgcagc cgccgcttcc gtgctgatcc ccgacagcaa cacgtcggtt
     4261 gtgacaatca gtaaattagc cgtgaagccg caacctacgc ctgcaatggc ggccagtaaa
     4321 cctgcaactg gatgcctgcc caccgccaga aaaatcagcg cacccatcgg tggcatgatc
     4381 actaacgccg catcggaaga aatgtggctg aaaaaagcaa taaacagcac catataactg
     4441 gcgtagcggg cattaacatg cgatgccatt ttaaccatta gcgctggcag taagccgacg
     4501 cgctccgcta ggccggcacc taaaaccagc gccaggatcg ctccaagtgg agcaaaaccg
     4561 ctaaagtttt taatcacatt gggtaaaaac cagtgtaatc cttccacact gagcaggttt
     4621 ttcaccacca ccggcgtacc atcggtcggg tttttcgcac tgacgccaaa ggctgacaaa
     4681 attgccgtcg tcaccatgag tacgattatc aaatagataa agagcaaaaa aggatgggga
     4741 accttgttac caattctttc gacccagcca tagagcttcc cggattggga ggacgacggt
     4801 atggatgaca tactcatggg cattcctcgg ttgttgtgtt tgcgttgttg ttattttaaa
     4861 ggtgacggtg tcacgttttt cgggataggg cagtgatacg gttgcgtgtc cgtaacttgc
     4921 tgatgctctt gttggcattc ttgcaatagc cctgaatcaa tgaagagatt gactgtggtt
     4981 gctgccatag ttttcgccgc cagcagcatt cctttatgag caatagatgt tcgcccctgg
     5041 ctaaccagtt gccacgtatg tagcggtgta ccgacggcaa aacaggggct gaaacactgg
     5101 gcaacaggca gtttccaact gacgtcgccg acatcagtcg atgccgcaag cacgttatcg
     5161 gtggcggcat atggagcgac ctcattcgcc agtaccgttt cacgatgacg tagtgcaaaa
     5221 gccttgccgt tttcgccacc ggttgcggcg atattattca gactgttttg ccgatcgttg
     5281 ggggtgagcg tagcctgaat ttgtttcgca aaagccagtt cttcggagtt ccattccggg
     5341 gtaccaaaat gggatagggc atggtacatg gcattttcta aggtgcgatt cgggagataa
     5401 ctggaacagg ctttgtcgaa gcggcattca accgtggttt cggtcatcaa tgccgcacct
     5461 tcggcgattt tggcgacccg atcataaata tgctgcacgt cggtcatttc gggggcgcgg
     5521 ataagataaa gcacttctgc ctgcgcctgg accacgttgg gcgagatccc gccgctattt
     5581 gtgatggcat agtgtacgcg cgctttttca ataatatgtt cgttgaggaa gttggtgcca
     5641 gtggtcatca acgttacggc atcaagggcg ctgcgtccca aatgagggga attcgcggca
     5701 tgtgctgcga tccctttaaa gcgccatgat gcctgaatgt ttgccagcgt gcgggtattg
     5761 aacataccgg caaaggcttc cgggtgccag gtgagtgccg catccacatc atcaaatacc
     5821 ccctcgcgga ccatgaacgt tttacccgag ccgccttctt cgccaggaca accataaaag
     5881 cgcactgtgc cgccttgccc atattgttcc agccatttct tgacggctat tgcagcggca
     5941 aaggcggcgg ttcccagcaa attgtgtccg caaccgtgac cattttcacc gggcgtcgcg
     6001 gatgtaggtt gcgcgcaacc agcttgctga cttaaacctg ccagggcgtc atattctccc
     6061 agcagggcga taaccggttt gccttgacca aacgaagcaa taaaggcatt tgggatattg
     6121 cctacgttgc gggtaacggt gaagcctgca gattccagcg ccgaagccag atgctccgct
     6181 gaccagaact cttcaaaacg tgtttctgga tgatcccaga tttgatcggc aatatcggta
     6241 taacgttggc gatcggcttc aatcgcatcg tcgataaaac gatagatttc ctgcatcaga
     6301 tacctcgcgt ccagggaaaa ttgagcgcgg tgcgcgccag cgtttcgacg gcaatagcga
     6361 gaacctgctc gtcaaaatcg aatttttcgt tgtgatgacc tgccgccagc tgtgtgccaa
     6421 acaccacgta ggaggcttgc ccttgatgtt gctgcacgcg ggccatcatt aatgtggcat
     6481 cttcggaacc cgcaggcgct tcaacacgtt caatggcctg attgaccccc gcgacctgag
     6541 ccgcctgact ttgcaaccat gcgacccatt gcggcgaagg agaactggcg gtagctgcac
     6601 ccatcagacg agtttcaacg ccgacaccat acatggttgc tgcgccctga atcgcttgtt
     6661 gtgcacggtc aaaaacatat tgattaatga cgtcgctggc cccgcgtgtt tccactttca
     6721 gcaacgccga ggcaggaaca acgttacggc cgcttcctgc ctgcataacg cccacgttta
     6781 ctctggaagc tccttcgctg tgcggggcga ttgcatgcag tgcaagagtt gcttgtgctg
     6841 ccgccaacaa ggcattgtga ccgtcttctg gttttgcgcc tgcgtgagcg gcggtcccgg
     6901 tgaagtgcgc gtcaaatttg gtggttgcca taaaattatc actgccgcac accacggtgt
     6961 ccgcaggtac gccagtgcca atgtgcacgg cagtaaaata atcaacatca tctacgacac
     7021 ctgcatcgac catcgcccgc gcgccacgcg taccttcctc tgcaggctga aaaatcagtt
     7081 tgatgacgcc atgtagtccg gactcgaatt gtttaagggt atgcgccagc ccaagcccaa
     7141 tggcggtatg tccatcatga ccacaggcat gcatcattcc ggcgttacat gacgcaaaac
     7201 cgtcgcggta ggggcgatgg ctgacatcct gctcttcact gagatccagc gcgtccatat
     7261 cgacacggaa agccatcacc ggaccggggc gaccggtatc cagggtggcg acgataccag
     7321 tgaaaccacc ttcaaaaacc gcaatccatt gtgctagcgc accctgttga cgagcgcgct
     7381 cgaattcgcg ttgtagagtg agttcatcag gtagtcccat ccggctactt tcattaacta
     7441 cttcgcggcc cagcgccagt gaatagccga gctgctgcaa ttcttccgca acaagggtgg
     7501 cagtgcggaa ttccacccag ccagactctg catagtgatg aaaatcacgt cgccagtgcg
     7561 ataattttgg ggcaagcgaa ttaacaaatt gattcaaaga ctccataacc tttcccgtca
     7621 tcagtaaaaa gtgtgacccg gttcacgtag cgatagtttt tacttatcac taactgattt
     7681 ttcacagttt taaccgttca taaattaccc tgacacaatc atctgcatta aagtagatgc
     7741 cagtttcttt ggtctgataa ataacggtta tcggtggcgt catggctttt caggtaaaaa
     7801 ttcatcaaat tcgtgctttt gttgaagtgg ctcgtcaggg cagcattcgc ggagcgagcc
     7861 gaatgttgaa tatgtcgcaa ccggcactga gtaaatctat tcaggagctg gaagaaggat
     7921 tagcggcgca actctttttt cgccgtagta aaggcgtgac gttaactgat gccggtgaaa
     7981 gtttttatca gcacgccagt cttattcttg aagagctgcg cgcagcgcaa gaggaaattc
     8041 gccaacgaca agggcaactg gcagggcaga ttaatatcgg catgggggcc agtatttccc
     8101 gcagtctgat gccagctgtc atatctcgtt ttcatcagca gcatccgcag gtaaaagtac
     8161 gcattatgga agggcaactg gtgtcgatga ttaatgaatt gcgtcaggga gaattggatt
     8221 tcaccatcaa tacctattat cagggaccgt acgaccacga atttactttt gagaaattac
     8281 tggaaaagca attcgcgatc ttttgccgcc cgggacaccc cgccattggt gcccgttcga
     8341 tcaaacagtt actggattac agctggacaa tgccgacgcc acacggcagt tactacaaac
     8401 agttgagtga attgcttgac gatcaggcgc aaacgccaca ggtcggtgta gtctgcgaga
     8461 cgttctcagc ctgtatcagt ctggtggcaa aaagcgattt tctcagcata ctgcctgaag
     8521 aaatgggctg cgatcccttg cacggacagg ggctggtgat gttgccggtt agcgaaattt
     8581 taccgaaagc ggcctattat ttgattcagc ggcgtgatag tcgccagaca ccactgaccg
     8641 cgtcattaat cacgcaattc cggcgagaat gcggctatct gcaaagttaa aactgcataa
     8701 aaaaatagag tctgtcgaca tccgccagac tctacagtac acacagcagt gcatccgcgt
     8761 cttaagtccg gcattgtctc ctctgcgccg gtgactgtgt tataacggtt ttaaccttta
     8821 gttgccaatt ttcttcagtg a
//
LOCUS       DAPGWB010000169         8814 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.171, whole genome shotgun sequence.
ACCESSION   DAPGWB010000169 DAPGWB010000000
VERSION     DAPGWB010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8814
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.171"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(64..720)
                     /locus_tag="RHX79_003932"
     CDS             complement(64..720)
                     /locus_tag="RHX79_003932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000268550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199047.1"
                     /translation="MAVIYYGEGTHDAGFVGFRVARTVGVADDYRQEYFSLREYSYAT
                     AHRLAYSLDRKWEAEAEEVKRQNKTCKRRRNSGPNIIAEGLRAYISIENRSRMGVKRT
                     YFAPCFLVTKPGYGNGDIVFRISTHGYAEAYEKAVEKYCEIHDLTDEQYVELLDRMPS
                     TEVFTGYLLNALLIRGHRATKAEILSKLGAAKNEDDITNSKGKSGHNRVRCPEYRWAQ
                     "
     gene            complement(720..2147)
                     /locus_tag="RHX79_003933"
     CDS             complement(720..2147)
                     /locus_tag="RHX79_003933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000936897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDV2199048.1"
                     /translation="MLPIVSPSVVTKQLAFNRVGDKRKVRVSSNFLDVMGFKPGMGIA
                     VEPGEGMGGFSVIPATDELQTHQVYQRRYQPKSRSNNPLETVIEFSGQGLIDKCFPRY
                     TERFHVEMRKGRVVFTPVANRAFAIADRFRKTSPFRAFVALTGGVDIHVMESLGWKAE
                     IVLEHRPVEARDRASGRNLSEVHALNTLVNSSPRILLNEDIHHLELDRLGALLAECPP
                     IGLAHYSLGCDDHSNAKSPRDKERSLEDLSTMLDMVYPALKQIEVVNPAVVLVENVPN
                     FKASGAGAMMGTTLRRMGYFLTEMVLNGLDFGAYQGRERYYMVASVFPGFVPPKPEQR
                     AGGRLWPVIEKHLGDCADVTALKSIQARESTSRRMPAFLTRESTSCPTILKSQDRGVK
                     DAVYIQDGGRIYKPSVDLVQELMSIPDSFDISWMAKEQATETLGQSVDYRLHSAVMAA
                     VRDHLNVNCGRHTVVQHGIRSKEGK"
     gene            complement(2151..2651)
                     /locus_tag="RHX79_003934"
     CDS             complement(2151..2651)
                     /locus_tag="RHX79_003934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000647188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199049.1"
                     /translation="MKAQAYPPSVIRKGAVLYAALYYISDDDKAKVEVTEWIVRSIQK
                     RRNSTSDQRYVNLAQKLDGITWGKRSRKNGDFGWLPSIPSWCLKQFREGGELPFGVYT
                     TRLAALKFAKVSLQEEVQYCEAELKKAQTEEDTQELQEELAENQRLLKAAGAMVKREQ
                     NKKKRG"
     gene            complement(2660..2971)
                     /locus_tag="RHX79_003935"
     CDS             complement(2660..2971)
                     /locus_tag="RHX79_003935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199050.1"
                     /translation="MTEQTNKKLMLDESPDMPLQFKWRKFGGAIFTATQTMEHVKEGR
                     KLGPTPAGMLPQEVWLNRLIAMEETLPRGKFFDRFRRRDKNEQYDLAADHLRLVGKKK
                     R"
     gene            complement(2977..3408)
                     /locus_tag="RHX79_003936"
     CDS             complement(2977..3408)
                     /locus_tag="RHX79_003936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005507681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199051.1"
                     /translation="MCQGHGKFVDAKAMLVAAIELAKKQREPVIEVVMGLVLQGVDVR
                     GKEPGERFKAAQAFNAPGHNLLRYGWDAWELYALHEGVSPELASLGRSVMREWHSHSW
                     GRFSGEVGFNAAEIMIKQAKDNPEKAEERWAFLLSEEWMVE"
     gene            complement(3476..4150)
                     /locus_tag="RHX79_003937"
     CDS             complement(3476..4150)
                     /locus_tag="RHX79_003937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate kinase"
                     /protein_id="HDV2199052.1"
                     /translation="MDENKLNIETVDGHNELVVSFLSRMVSLSDEEKQTVLSCLPDTG
                     KQTITQLYEALRSQGHQDLAEKVEPYLQQGVFGPIFDNAKSKVFVRDEAPFFLMDENP
                     LNWDDAKAFNRLRMSTTCVLGRGGWTIGERFDDRFDTEVGGTQLIVTQSLNEKGEIEG
                     GLPTSMSLNDFAEFPKQPRPPQIVDYQEDKRYTLEEAEAIPELAPVVQRLKERIEEYE
                     ERRAHD"
     gene            complement(4125..4406)
                     /locus_tag="RHX79_003938"
     CDS             complement(4125..4406)
                     /locus_tag="RHX79_003938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000044824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199053.1"
                     /translation="MSKRYAVVPHPKLKREYKGRLVRTTRVLKNGWGLIPLGAVATVT
                     HQSPKGSELTFEPCDCCGLKAIISHVSMDSIEFIEPITEEEDGREQAQH"
     gene            complement(4399..4776)
                     /locus_tag="RHX79_003939"
     CDS             complement(4399..4776)
                     /locus_tag="RHX79_003939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199054.1"
                     /translation="MPKQANHLRLKKPCANCPFRKEGAIELAPGRLEGIINDIVENDM
                     TTFHCHKTVHSKSGGEWDEEGNYAPSGQESMCAGAAAYLMKIGRPTVAMRIAFAFGDA
                     KVSDWDEAQELVVEPLVQGDRNE"
     gene            5103..5246
                     /locus_tag="RHX79_003940"
     CDS             5103..5246
                     /locus_tag="RHX79_003940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199055.1"
                     /translation="MLQGNTNTNKRIPLAAFMKWPLAKRQDFIDREMSGCPDFIKTSL
                     LRH"
     gene            5338..5973
                     /locus_tag="RHX79_003941"
     CDS             5338..5973
                     /locus_tag="RHX79_003941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDV2199056.1"
                     /translation="MSPETQQLTSKALSLIEQSRYRMGTSRFVEAFIDQWAYLQTGLY
                     PAKEEIPEELQPVAFELSHVLSAAIKRDPTSDVLGYVLSMSGFHKKGTNYFPTPPEIG
                     RLMSLIVGSQSSADFYEPCCGSGINAIHWMENLIENHGPEALREASIYLEDIDPLMVK
                     CCMIQLFHYFESRNTTPKTLSIVGIDTLSRRTKNIAYYAEKPPATAATVAA"
     gene            complement(6026..6298)
                     /locus_tag="RHX79_003942"
     CDS             complement(6026..6298)
                     /locus_tag="RHX79_003942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2199057.1"
                     /translation="MKISQDMKRKFALVNALSKTEKPSLQDLHKATNIPESTIKRQLS
                     ALRDEFGMNILFVRESTGERGATGYYMLTDWGILDRSSFLNRYGKL"
     gene            complement(6347..7528)
                     /locus_tag="RHX79_003943"
     CDS             complement(6347..7528)
                     /locus_tag="RHX79_003943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDV2199058.1"
                     /translation="MALNNLKGLSELAKAAKGKKGKEVLTVPVDDVVSKVQVRKRFRN
                     IEELAATLLTEGQQSPIIVFPKNEEGKFVIQKGERRWRACKHAGIETIDLVVNDKVQN
                     NLDETAGELIENIQRDDLTPVEIAEALNLFIEEGWKQKDIADRLGKNITFVSTHLSLL
                     KLPDCVRELYDNEVCSDTETLNNLRLLFDLNEERCRAVCAVAMSDGITRKQSRELLND
                     AKRIKDEMEKGPLTGSHQNDELGAGNTDEQSLNSGGDGTSEQTGNDDLNLAQEELEGG
                     KNSNGQDDDDEDPLRDEEGEHKDPVKQPDNSGKDKDEEGGDALPPLPKDKEWKNVRAD
                     SLIFAVNVNLDGETKRGVIMTDRVALVPSTVWVKTLDGEGKEKHVHVPVSDIELLSVE
                     G"
     gene            complement(7532..8317)
                     /locus_tag="RHX79_003944"
     CDS             complement(7532..8317)
                     /locus_tag="RHX79_003944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDV2199059.1"
                     /translation="MAKVISFANQKGGVGKSTLCIQQAFYLALQKKKKVLVLDMDGQG
                     NTSSRLAPRRELEDGDYEPILTGTKTAELFAYELDGIEVMHCPCGADLIHTPKNDPDL
                     FEMEAVPLDQAMNPARHLAELFENYDYVLIDCPPSLGRKLVAALVMSTHVACPVKLSG
                     FAVDGVEGLLNTIIGVREAYNQDLEILGIVINDMDRSVNHDKALKSLENTVPDLLFEN
                     KIMHRPPLDTATTDGIPVWELRYGHVAAKEVEAVLEELLEKVG"
     gene            complement(8491..8802)
                     /locus_tag="RHX79_003945"
     CDS             complement(8491..8802)
                     /locus_tag="RHX79_003945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199060.1"
                     /translation="MDAKELNHMIAEAYSRDLQKPELVSFKEVSRWGRKYGFPVVCTL
                     ADESEEKQIHWAASLLIQVAGTWPREDMPELLTPERGSALFNDAMQLLANGLGAANQL
                     R"
BASE COUNT         1987 a         2503 c         1997 g         2327 t
ORIGIN      
        1 aaaaacataa ttccgccccc aaagaggtgt tgctataaaa catggtttga acatctggcg
       61 ctgttattgc gcccaccgat actctgggca acgcactctg ttgtggccgc ttttcccttt
      121 gctattggtg atgtcatctt cattcttcgc agcccccagc ttactcagta tttcagcttt
      181 tgtggcgcga tgaccgcgta ttaaaagagc attcagcagg tatccagtga acacctctgt
      241 actcggcata cggtcaagca actcaacata ctgctcatcc gtcaaatcat ggatctcaca
      301 atatttttcc accgcctttt cgtaggcttc tgcgtagcca tgagtggaaa tcctgaaaac
      361 aatatcccca ttgccgtagc ctggctttgt gacgagaaaa caaggtgcga agtaggttct
      421 cttcaccccc atccggctcc ggttctcgat actgatataa gccctcagcc cctcagcaat
      481 gatatttggc ccggagttgc gtcgccgctt acaagtctta ttctgacgct tcacctcttc
      541 tgcctcagct tcccactttc ggtccaagct gtaggccagc cggtgagctg ttgcgtagga
      601 atactctctc aaggagaagt attcctgccg gtaatcatcc gccaccccaa ctgttcgtgc
      661 gacacggaac ccgacgaaac cggcgtcatg ggttccctcg ccgtagtaaa tgactgccat
      721 tatttacctt ccttacttct gataccgtgc tgcaccacgg tatggcgacc gcaattcaca
      781 ttcaggtgat cccgaactgc ggccatgacc gctgaatgca atctgtaatc cacactctgc
      841 ccaagtgttt ctgtcgcttg ttcttttgcc atccacgaaa tatcaaagct atcaggtatc
      901 gacatcaact cctgaaccag atcgaccgat ggcttgtaaa tgcggccacc gtcttggatg
      961 tacactgcat cctttacccc acgatcctga gacttgagga tggtcgggca actggtgctt
     1021 tctctcgtca agaacgcagg catcctgcga gaagttgact ctctggcctg aattgacttc
     1081 aacgctgtga cgtctgcaca atccccgagg tgcttctcga tcaccggcca caatcgtcca
     1141 ccagctctct gctcaggttt cggtggaacg aacccaggga agaccgacgc caccatgtaa
     1201 tagcgttctc gcccctggta cgcgccgaaa tccagaccgt tcaagaccat ctcagtgagg
     1261 aagtacccca tccgccgcag tgtcgttccc atcatcgccc cggctccgga tgctttgaag
     1321 ttcgggacgt tttccaccag cacgacggca gggttcacga cctcgatctg ttttagtgcc
     1381 gggtaaacca tgtcgagcat ggtggagaga tcttcaagag aacgctcttt gtcccttgga
     1441 cttttggcgt ttgagtggtc atcacacccc aacgagtaat gggccaaacc aattggtggg
     1501 cactccgcca gcaaggctcc aaggcgatcc agctccaggt gatgaatgtc ttcattcagc
     1561 aggatacgcg gggagctgtt caccagcgta ttgagcgcat gtacttcact caggttccgc
     1621 ccggatgctc tgtctctggc ttcaactgga cgatgttcca aaacaatctc agccttccag
     1681 ccaagcgatt ccataacatg aatgtctacc ccgccagtca atgccacaaa ggcacggaaa
     1741 gggctggttt ttctgaaccg atcagcaatg gcaaaggctc tgtttgcgac gggagtgaag
     1801 actactcgac cttttcgcat ttcgacgtgg aaacgctctg tatagcgagg gaagcactta
     1861 tctatgagcc cttgtccaga aaactcaata acggtttcca gcgggttgtt ggagcgactc
     1921 tttggttgat accggcgctg ataaacctgg tgtgtctgta gttcatcggt cgctgggatc
     1981 accgaaaaac cgcccatccc ctcccctggc tcaacggcga tgcccatacc tggcttgaac
     2041 cccataacat ccaaaaagtt ggacgaaacc ctaaccttgc gtttatcgcc tactcgattg
     2101 aacgcaagtt gtttggttac tacggagggg gagacgatcg gtaacattgg tcaacctctt
     2161 ttcttcttgt tttgctcgcg cttcaccatt gctccagcag ctttcagaag tctctggttc
     2221 tccgccagct cctcttggag ttcctgagta tcctcttctg tctgagcctt tttcagctcg
     2281 gcctcgcaat attggacctc ttcctgcaag ctgactttcg caaacttgag agcggccagt
     2341 cgcgtcgtat aaacgccaaa aggcaattcg ccaccttccc ggaactgctt caagcaccag
     2401 ctcggtatag atggcaacca accaaagtcc ccattcttcc gtgacctttt cccccacgta
     2461 atcccatcta acttttgggc aagattgaca tagcgttgat cgctggttga gttgcgtcgt
     2521 ttctgaatag agcgaactat ccactctgta acctcgacct ttgctttatc atcatcagag
     2581 atgtaataaa gggctgcgta caacacagcg cctttacgaa tgactgatgg tgggtatgcc
     2641 tgggctttca tctatccccc tatcgctttt tctttccgac aagacggaga tgatcggcgg
     2701 ccaagtcata ctgctcgttt ttgtcgcggc ggcggaatct gtcaaaaaac ttccctcgtg
     2761 gcagggtttc ttccatagcg atcaggcggt tcagccacac ttcttgaggt agcatccctg
     2821 ctggagtcgg cccgagctta cgtccttcct tgacgtgctc cattgtttgc gtggcagtaa
     2881 aaatcgcacc accaaacttt ctccacttga attgcagggg catatctgga gactcatcca
     2941 gcatcaattt cttattggtt tgttctgtca cgacaattac tccaccatcc attcttcact
     3001 aagcaggaac gcccagcgct cttctgcttt ttctgggttg tctttggcct gtttgatcat
     3061 gatctcggcg gcgttaaagc ctacctctcc actgaaccgg ccccatgaat ggctatgcca
     3121 ctcgcgcatc acacttcggc caagcgatgc aagttctgga cttacaccct catggagggc
     3181 atagagctcc caagcatccc acccgtatcg taataggttg tgccctgggg cgttaaaggc
     3241 ctgagcagcc ttgaaccgct ctccaggctc cttccctcta acatccacac cctggagcac
     3301 caaccccatt accacttcaa tgacaggctc gcgttgcttc tttgccagct cgatggcagc
     3361 caccagcatt gctttggcgt caacaaattt cccatgccct tggcacatac cgcaggtttc
     3421 tttggaaggg gaaaagtcat aaacaccgga accagcacaa aggcggcatg tcaggtcaat
     3481 catgggctct tctctcctca tactcttcga tgcgctcttt cagacgctga accactggtg
     3541 cgagctcagg gatagcttcc gcttcctcaa gcgtgtatcg cttgtcttcc tggtaatcga
     3601 ctatttgagg aggccttggc tgtttaggga actcagcaaa gtcattcagc gacatcgagg
     3661 taggaagtcc tccttcaatc tcaccttttt cgttgagtga ctgagtgacg ataagctgtg
     3721 ttccgcccac ctcggtatca aagcggtcat caaagcgctc accgatagtc cagccgccac
     3781 ggccaagaac acaggtcgta ctcatacgta ggcgattgaa tgctttagcg tcatcccagt
     3841 tcaaaggatt ttcatccatg aggaaaaaag gcgcttcgtc ccgaacgaac accttggact
     3901 tggcgttatc gaagatcggc ccaaacaccc cctgctggag gtatggttcg actttctctg
     3961 caagatcctg gtgcccttga gaacgcagcg cctcatagag ctgggtgatt gtttgtttgc
     4021 cggtgtccgg aaggcaggac aatactgtct gcttttcctc gtcactcagg cttaccattc
     4081 tggacaaaaa gctgactacc agctcgttgt gcccatcgac cgtttcaatg ttgagcttgt
     4141 tctcgtccat cttcttcctc agtaatcggt tcgataaatt caatggagtc catgcttaca
     4201 tgactgataa tggctttcag gccgcagcag tcgcatggtt caaaggtcag ttctgatccc
     4261 ttgggagact gatgcgtgac cgttgccaca gcccctagag ggatcaaccc ccagccgttt
     4321 tttagtaccc gagtagttct gaccagccga cctttgtact ctcgtttcag tttcggatgc
     4381 ggcactaccg catatcgctt actcatttcg gtccccttgt accaaaggct cgacaaccag
     4441 ctcttgagct tcgtcccagt cggacacctt tgcatcacca aacgcaaagg caattcgcat
     4501 agccactgtc ggcctgccta ttttcatcaa gtaagccgca gcaccggcac acatcgactc
     4561 ttgtcccgaa ggtgcatagt taccctcttc atcccattca ccacctgact ttgagtgcac
     4621 ggtcttgtgg caatgaaacg tcgtcatgtc gttttcaacg atgtcgttga tgatgccttc
     4681 taatcgccca ggggccagct cgatagcgcc ctccttccgg aatggacagt tggcgcaagg
     4741 tttcttcaaa cggagatgat ttgcttgctt tggcatacat atcactttta cagcatcatt
     4801 ttatgattct atgatatagc catattccgt gtagtcaata tctcactaac aattactttc
     4861 tatcggacgc ttacgcgccc attttgggca gatagacaag ttatttgggc gtttgggcgt
     4921 ttggagtgtg cgaggtggac agcggggaga ctttcacatg tgaaagtttt gtttcttggt
     4981 atcgttttat tgtctcttga tattatttta tgatgctgta ataatcataa ataagggccg
     5041 catcgctctt cgaccttcgt tgcagccctt acaacacaat caagcaatta aggagctttg
     5101 ttatgctgca aggcaatact aacacgaata agcgcatccc gctcgcggcg ttcatgaaat
     5161 ggccgctggc gaaacgtcag gacttcatcg accgggaaat gtccggttgc cccgacttta
     5221 tcaagacgtc tttgcttcgg cattaaggcg atcaggcagg aaagcaaaga acctcgcttc
     5281 ggcggggttc ttcgtttcta cctcttgaat gtttcgtcag aacaaactgg agcgcttatg
     5341 tcaccagaaa cacagcaact tacatccaag gctttatctc tcatcgagca gtcccgatac
     5401 agaatgggca catctcggtt tgttgaggcc tttattgacc agtgggcata cttgcagact
     5461 ggcctatacc cagccaagga ggagatcccg gaagaacttc agccggtcgc cttcgagctc
     5521 tctcacgtcc tgtctgccgc cattaagcgc gaccccacca gcgatgtttt gggttacgtc
     5581 ctaagcatgt ctggcttcca caagaagggc accaattact tccccactcc tccagagatt
     5641 ggccgcttga tgtcactcat tgttggctca cagtcttcgg cagactttta tgagccctgc
     5701 tgtggttctg gcatcaacgc cattcactgg atggaaaacc tgatcgagaa ccacggtccc
     5761 gaagcattga gagaagcctc aatctacctg gaagacatcg atccgttgat ggtgaagtgc
     5821 tgcatgatcc agctattcca ttatttcgag tcccgcaata ccactcccaa aacgctgagt
     5881 atcgtcggca tagacaccct tagcagacga accaagaaca tcgcctacta cgccgaaaaa
     5941 cctccagcaa ccgccgctac cgtggcagca taaaaaaacc cgccgattgg cgggttttgc
     6001 attcaatgcg ctgctctatg gcaccttaca gttttccgta ccggttcaag aacgaagacc
     6061 tgtctaagat cccccagtct gtcagcatgt agtagccggt ggcacctcgt tcgccggtag
     6121 actccctgac gaacaagata ttcattccga actcatcacg cagggcagac aactgtctct
     6181 tgatcgttga ttcaggaata tttgttgcct tgtgaaggtc ttggagactt ggcttctccg
     6241 ttttagacag ggcattcacc aaagcaaatt ttcttttcat gtcctgtgag atcttcatat
     6301 tcacctgttc ttgacaggcc caacctctct ggctgggcct cctttattag ccttcgacac
     6361 tcaggagttc aatgtctgac acaggcacat gaacatgctt ttccttgcct tcgccatcga
     6421 gcgttttaac ccagacagta gacggaacca gagcaacacg gtcggtcatg atgactccac
     6481 gtttggtctc gccatccagg ttaacgttga cagcaaaaat caaactgtca gcccggacgt
     6541 tcttccattc cttgtccttc ggcagaggag gaagagcatc accgccttct tcatctttgt
     6601 ccttgccgct gttatctggc tgcttgacag gatctttgtg ctcaccctct tcatcacgca
     6661 aagggtcttc gtcatcatcg tcctgaccat tggaattttt acccccttcc agttcctcct
     6721 gggcaaggtt caggtcgtca ttcccggttt gttccgacgt accatcccca cccgagttga
     6781 gggattgctc gtcggtgttg ccagcgccaa gctcatcatt ctggtgggag ccagtcagtg
     6841 ggcctttttc catttcgtct ttgatacgtt tggcatcatt cagcagctca cggctttgtt
     6901 tacgagtaat cccgtcagac atagccaccg cgcagacggc gcgacatctt tcttcattca
     6961 gatcgaacaa gagacgaagg ttattcaagg tctctgtatc agaacatact tcattatcgt
     7021 ataactcacg cacacagtca ggtagcttga gcaacgacag atgcgtagat acgaaagtga
     7081 tattcttacc gagccgatca gcaatatcct tttgcttcca accttcttca ataaacaggt
     7141 ttaacgcctc ggcaatctct accggagtca agtcatcccg ctggatgttt tcgatcagct
     7201 caccagcagt ctcgtccaag ttgttctgga ccttatcatt caccaccaag tcaatggtct
     7261 cgataccagc gtgtttacac gctctccaac gccgctcccc tttttggatg acgaacttgc
     7321 cttcttcgtt cttcgggaac acgatgatcg gagactgctg cccttcggtc agcaaggttg
     7381 ccgccagctc ttcaatgtta cggaagcgct tacgaacctg gaccttggat acaacgtcgt
     7441 caacaggtac ggtaagaacc tctttgcctt tcttgccttt ggcggcttta gcaagttcgg
     7501 acaggccttt taaattgttc aatgccatcg cttagcccac cttctctaat agttcttcca
     7561 acaccgcctc aacttctttg gccgcgacat gtccatagcg aagctcccag acagggatgc
     7621 catcagtcgt cgccgtatcg agcggaggcc ggtgcataat tttgttctca aacaacagat
     7681 ccggaactgt gttctccagc gacttgaggg ctttgtcgtg attgacagag cggtccatgt
     7741 cgttgatcac gatgcccagg atctccaaat cttggttgta cgcctcgcgc acaccaataa
     7801 tcgtgttcag gagaccttct acgccgtcca cagcgaagcc agagagcttt actggacatg
     7861 ccacatgggt agacatcacc aacgctgcca ccagctttct gccgaggcta ggcggacaat
     7921 caatcagcac gtagtcgtag ttctcaaaca gctcagccaa atggcgagcc ggattcatgg
     7981 cctggtcaag aggcacagcc tccatctcaa acagatccgg gtcgtttttc ggcgtatgaa
     8041 tgaggtctgc accgcaaggg cagtgcatga cctcaatgcc gtccagctcg taagcgaaca
     8101 gctctgcggt tttggttcct gtgaggatgg gctcgtagtc accatcctca agctctcgtc
     8161 tgggggccag tcgagaggac gtgttcccct gaccatccat atccaagacc agcactttct
     8221 ttttcttctg taacgccaga taaaaggcct gctggataca gagggtactc ttacccactc
     8281 cgcctttctg gttggcgaag ctgattactt ttgccatacc cacctctatt ttggtttctc
     8341 gcaggtgatc aagaccaccc ccaaactttc acatgtgaaa gattgtagcg atcataaaat
     8401 gatactgcaa tatctaatta tggttctgtt aaaacaaact ttaaacaaaa aaacggccat
     8461 gaaggccgct tattgacaag gtttgtgctg tcagcgcaat tgatttgctg ctccaagccc
     8521 attcgccaat aactgcatcg catcgttgaa cagcgcggag ccccgttccg gtgtgagcaa
     8581 ttccggcata tcttctcgcg gccaagtacc ggctacttga atgagcaaac tggcagccca
     8641 gtggatctgc ttttcttcac tttcatcggc cagagtgcat acgacgggga aaccgtactt
     8701 acgcccccag cgactcacct ctttgaacga taccagctca ggcttttgca aatcccggct
     8761 gtaggcctca gctatcatgt ggttcagttc tttagcgtcc atttatccca ctct
//
LOCUS       DAPGWB010000170         8810 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.172, whole genome shotgun sequence.
ACCESSION   DAPGWB010000170 DAPGWB010000000
VERSION     DAPGWB010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8810
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.172"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..740
                     /gene="yneK"
                     /locus_tag="RHX79_003946"
     CDS             <1..740
                     /gene="yneK"
                     /locus_tag="RHX79_003946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative protein YneK"
                     /protein_id="HDV2199061.1"
                     /translation="FCAPNPKPVTMGRVFQTGVERVLFLFLNDFIEQFPMINLGVPIK
                     RAHTPHIEPLPPDRHTAADYLRQFDLLVLNFISRGNFVILPRLWSNSEVHRWFVNKDP
                     NLITAILDITDGELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQESPHFQDLFLF
                     FANMLLHYHQFMNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKNETPPKVTHED
                     LVKNRPRSPVRPPIPATAKTPDLPERH"
     gene            890..2080
                     /gene="ydeA"
                     /locus_tag="RHX79_003947"
     CDS             890..2080
                     /gene="ydeA"
                     /locus_tag="RHX79_003947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose MFS transporter"
                     /protein_id="HDV2199062.1"
                     /translation="MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFH
                     MQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFT
                     VLVISRIGVAFAHAIFWSITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIV
                     GQYFGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLT
                     VVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASAL
                     VSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVA
                     MALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIIIFRRWPVTLE
                     EQTQ"
     gene            complement(2105..2770)
                     /gene="marC"
                     /locus_tag="RHX79_003948"
     CDS             complement(2105..2770)
                     /gene="marC"
                     /locus_tag="RHX79_003948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter MarC"
                     /protein_id="HDV2199063.1"
                     /translation="MLDLFKAIALGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQS
                     LMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSP
                     EAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAP
                     PLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIK
                     TYH"
     gene            2982..3416
                     /gene="marR"
                     /locus_tag="RHX79_003949"
     CDS             2982..3416
                     /gene="marR"
                     /locus_tag="RHX79_003949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310164.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance transcriptional
                     regulator MarR"
                     /protein_id="HDV2199064.1"
                     /translation="MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFK
                     VLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTT
                     SGAAICEQCHQLVGQDLHQELTKNLTADEVATLEHLLKKVLP"
     gene            3436..3819
                     /gene="marA"
                     /locus_tag="RHX79_003950"
     CDS             3436..3819
                     /gene="marA"
                     /locus_tag="RHX79_003950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707445.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     MarA"
                     /protein_id="HDV2199065.1"
                     /translation="MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQR
                     MFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDV
                     PPHKYRMTNMQGESRFLHPLNHYNS"
     gene            3851..4069
                     /gene="marB"
                     /locus_tag="RHX79_003951"
     CDS             3851..4069
                     /gene="marB"
                     /locus_tag="RHX79_003951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance protein MarB"
                     /protein_id="HDV2199066.1"
                     /translation="MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEQ
                     PPFDLNHMGTGSDKSDALGVPYYNQHAM"
     gene            complement(4126..5565)
                     /locus_tag="RHX79_003952"
     CDS             complement(4126..5565)
                     /locus_tag="RHX79_003952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000012594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HDV2199067.1"
                     /translation="MSGFKKGFLWGGAVAAHQLEGGWNEGGKGISIADVMTAGAHGVP
                     REVTEGVIDGLNYPNHEAIDFYHRYKTDIQLFAEMGFKCFRTSIAWTRIFPQGDEQEP
                     NEEGLQFYDDLFDECLKQGMEPVVTLSHFEMPYHLVTKYGGWRNRKLIDFFIRFASTV
                     FTRYKEKVKYWMTFNEINNQVNFSESLCPFTNSGILYSPEEDINEREQIMYQAVHYEL
                     VASALAVQTGKSINPEFNIGCMIAMCPIYPLTCAPNDMMMATKAMHRRYWFTDVHARG
                     YYPQHMLNYFARKGFNLDITPEDNAILASGCVDFIGFSYYMSFTTQFSPDNPQLDYVE
                     PRDLVSNPYIDTSEWGWQIDPAGLRYSLNWFWDHFQLPLFIVENGFGAVDQRQADGTV
                     NDHYRIDYFASHIREMKKAVVEDGVDLIGYTPWGCIDLVSAGTGEMKKRYGMIYVDKD
                     NEGKGTLERIRKASFYWYRDLIANNGENI"
     gene            complement(5590..7263)
                     /locus_tag="RHX79_003953"
     CDS             complement(5590..7263)
                     /locus_tag="RHX79_003953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HDV2199068.1"
                     /translation="MNIKTLNVSLLSFSIITALFPLNAMATKLTIEQRLELLENELSQ
                     NKQELKATQNELGVYKSRLSTLQKSITENKYKSASLAEISATSPVADNIKNENGEQNS
                     SAAAHTINGSQQVAVIESKGDKTTIESVTLKDISKYIKDDIGFSYQGYFRSGWGTGNH
                     GSPQTYAAGSLGRFGNEMSGWFDLTLNQRVYNQDGKTANAVVTYDGNVGEQYNDAWFG
                     DSANENIMQFSDIYLTTRGFLPFAPEADFWVGKHKLPQYEIQMLDWKTLTTDVAAGVG
                     IENWALGVGLFDMSLSRDDVDVYSRDFSRTSQMNTNSVDVRYRNIPLWDDATLSLMAK
                     YSAPNKTDQQQDNENDNSYFEMKDSWMLTSVLRQNLQRDTFNEFTLQVANNSYASSFA
                     SFSDASNTMAHGRYYYGDHTNGIAWRLISQGEMYLTDNIIMANALVYSHGEDVYSYES
                     GAHSDFDSIRTVIRPAWIWNTWNQTGLELGWFKQQNKTQQGVTLNESAYKTTLWHALK
                     VGESILGSRPEIRFYGTYINILDNELSNFKFNENSKDEFMAGIQAEVWW"
     gene            complement(7319..7630)
                     /locus_tag="RHX79_003954"
     CDS             complement(7319..7630)
                     /locus_tag="RHX79_003954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HDV2199069.1"
                     /translation="MFADEELVMELLVNAGQARSDAMEAIRCAGQKDWQGATQLMASS
                     ESACLQAHKIQTALISQDEGCGKIKVNLILIHAQDHLMNAILCQDLAREIISLRKELH
                     A"
     gene            complement(7658..>8810)
                     /locus_tag="RHX79_003955"
     CDS             complement(7658..>8810)
                     /locus_tag="RHX79_003955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001736301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDV2199070.1"
                     /translation="PDGFIAGLLHLNSIFPNLEKAQAIFTPVMNGSVNIMSIMIAFLV
                     ARNMAISYEQDDLLCGLTAIGAFFIVYTPYQMIDGQAFLTTKYLGAQGLFVAVIVALI
                     TSEIFCRLARNPKITITMPAAVPPAVARSFKVLLPIFFVMVFFSALNYCLTLISPAGL
                     NDLIYTLIQTPLKHMGTNIFAVIILGAVGNFLWVLGIHGPNTTSAIRETVFSEANLEN
                     LSWAAQHGTTWGAPYPITWTSINDAFANCGGSGMTLGLLLAIFIASKRAEYRDLAKMS
                     FIPGIFNINEPIMFGLPIVLNPIMMVPFIMVPIVNCAIGYFFVSMEIIPPVAYAVPWT
                     TPGPLIAFLGTGGNWLALLVGFLCLGVATMIYLPFVIAANKVNNMTTNG"
BASE COUNT         2385 a         2121 c         1898 g         2406 t
ORIGIN      
        1 atttttgcgc tcccaaccca aagcctgtca ctatggggcg cgtatttcag accggcgtcg
       61 agcgtgtgct atttctgttt ctgaatgatt ttattgaaca atttccaatg atcaaccttg
      121 gcgttcccat caaaagagcg catacaccac atattgaacc cctgcctccg gatcgccata
      181 ccgctgcaga ttacttacgc cagtttgatt tgcttgtcct gaattttatc tctcgcggta
      241 attttgtcat actcccccga ttatggagta actctgaggt tcacagatgg ttcgtcaata
      301 aagatcctaa cttgatcacc gccattctcg acataacaga cggcgaatta aaagaggatt
      361 tattgcaaag cctgatggat tcattaggtt ctaacaaaca tgtactaccc gaagtctgca
      421 tctgcttttt atccctttta gcagaacaag aatctcctca ttttcaggac ttgtttttat
      481 ttttcgccaa tatgttattg cactatcacc aatttatgaa tcccaatgaa agtgatttga
      541 atgacgtgtt gatgccagca tcattaagtg atgataaaat tatcaaacat atggcgcgca
      601 ggaccctcaa actgtttgta aaaaatgaaa cgccgccaaa agttactcac gaagacctgg
      661 tgaaaaacag gcctcgctcc cctgtcagac cacctatacc cgcaaccgcc aaaacgccag
      721 acctccctga acgtcattaa accgtgatgt taccgactct ctgacgcgga acagaatcag
      781 cgtcagagaa acggaaaacg cgatccagat cacaaatgca ttgtattcac atcattaacc
      841 gttttaagat catttcatca ctttttcgca actcacccga taatctgtta tgacaacaaa
      901 cactgtttcc cgcaaagtgg cgtggctacg ggtcgttacg ctggcagtcg ccgccttcat
      961 cttcaacacc accgaatttg tccctgttgg cctgctctct gacattgcgc aaagttttca
     1021 catgcaaacc gctcaggtcg gcattatgtt gaccatttat gcatgggtag tggcgctaat
     1081 gtcattgcct tttatgttaa tgaccagcca ggttgaacgg cgcaaattac tgatctgcct
     1141 gtttgtggtg tttattgcca gccacgtact gtcgttttta tcgtggagct ttaccgttct
     1201 ggtgatcagt cgcattggtg tggcttttgc acatgcgatt ttctggtcga ttacggcgtc
     1261 tctggcgatc cgtatggctc cggccgggaa gcgggcacag gccttgagtt taattgccac
     1321 cggtacagca ctggcgatgg tcttaggttt acctctcggg cgcattgtgg gccagtattt
     1381 cggttggcga atgaccttct tcgcgattgg tattggggcg cttatcaccc ttttgtgcct
     1441 gattaagtta cttcccttac tgcccagtga gcattccggt tcattgaaaa gcctcccgct
     1501 attgttccgc cgcccggcat tgatgagcat ttatttgtta actgtggtgg ttgtcaccgc
     1561 ccattacacg gcatacagct atatcgagcc ttttgtgcaa aacattgcgg gattcagcgc
     1621 caactttgcc acggcattac tgttattact cggtggtgcg ggcattattg gcagcgtgat
     1681 tttcggtaaa ctgggtaatc agtatgcgtc tgcgttggtg agtacggcga ttgcgctgtt
     1741 gctggtgtgc ctggcattgc tgttacctgc ggcgaacagt gaaatacacc tcggggtgct
     1801 gagtattttc tgggggatcg cgatgatgat catcgggctt ggtatgcagg ttaaagtgct
     1861 ggcgctggca ccagatgcta ccgacgtcgc gatggcgcta ttctccggca tatttaatat
     1921 tggaatcggg gcgggtgcgt tggtaggtaa tcaggtgagt ttgcactggt caatgtcgat
     1981 gattggttat gtgggcgcgg tgcctgcttt tgccgcgtta atttggtcaa tcattatatt
     2041 tcgccgctgg ccagtgacac tcgaagaaca gacgcaatag ttgaaaggcc cattcgggcc
     2101 ttttttaatg gtacgtttta atgatttcca ggatgccgtt aataataaac tgcacaccca
     2161 tacataccag caggaatccc atcagacggg agatcgcttc aatgccaccc ttgcccacca
     2221 gccgcataat tgcgccggag ctgcgtaggc ttccccacaa aataaccgca accaggaaaa
     2281 agatcagcgg cggcgcaacc atcagtaccc aatcagcgaa ggttgaactc tgacgcactg
     2341 tggacgccga gctaataatc atcgctatgg ttcccggacc agcggtactt ggcattgcta
     2401 gcggcacaaa ggcaatattg gcactgggtt catcttccag ctcttccgac ttgcttttcg
     2461 cctccggtga atcaatcgct ttctgttgcg gaaagagcat ccgaaaaccg ataaacgcga
     2521 cgattaagcc gcctgcaatt cgcagaccgg gaatcgaaat gccaaatgta tccatcacca
     2581 gttgcccggc gtaatacgcc accatcatga tggcaaatac gtacaccgag gccatcaacg
     2641 actgacgatt acgttcggca ctgttcatgt tgcctgccag gccaagaaat aacgcgacag
     2701 ttgttaatgg gttagctaac ggcagtaaca ccaccagccc cagggcaatt gctttaaaca
     2761 aatctaacat tggtggttgt tatcctgtgt atctgggtta tcagcgaaaa gtataagggg
     2821 taaacaagga taaagtgtca ctctttagct aaccttgcat cgcattgacc aaaacttgaa
     2881 ccgatttagc aaaacgtggc atcggtcaat tcatttattt gacttatact tgcctgggca
     2941 atattatccc ctgcaactaa ttacttgcca gggcaactaa tgtgaaaagt accagcgatc
     3001 tgttcaatga aattattcca ttgggtcgct taatccatat ggttaatcag aagaaagatc
     3061 gtctgcttaa cgagtatctg tctccgctgg atattaccgc ggcacagttt aaggtgctct
     3121 gctctatccg ctgcgcggcg tgtattactc cggttgaact gaaaaaagtg ttgtcggtcg
     3181 acctgggagc actcacccgt atgctggatc gcctggtctg taaaggctgg gttgaaaggt
     3241 tgccgaaccc gaatgataag cgcggcgtac tggtaaaact taccaccagc ggcgcggcaa
     3301 tatgcgaaca atgccatcaa ttagttggcc aggacctgca tcaagaatta acaaaaaacc
     3361 tgacggcgga cgaagtggca acacttgagc atttgcttaa gaaagtcctg ccgtaaacaa
     3421 aaaagaggta tgacgatgtc cagacgcaat actgacgcta ttaccattca tagcattttg
     3481 gactggatcg aggacaacct ggaatcgcca ctgtcactgg agaaagtgtc agagcgttca
     3541 ggttactcta aatggcacct gcaacggatg tttaaaaaag aaaccggtca ttcattaggc
     3601 caatacatcc gcagccgtaa gatgacggaa atcgcgcaaa agctgaagga aagtaacgag
     3661 ccgatactct atctggcaga acgatatggc ttcgagtcgc aacaaactct gacccgaacc
     3721 ttcaaaaatt actttgatgt tccgccgcat aaataccgga tgaccaatat gcagggcgaa
     3781 tcgcgctttt tacatccatt aaatcattac aacagctagt tgataacgtg acaacgtcac
     3841 tgaggcaatc atgaaaccac tttcatccgc aatagcagct gcgcttattc tcttttccgc
     3901 gcagggcgtt gcggaacaaa ccacgcagcc agttgttact tcttgtgcca atgtcgtggt
     3961 tgttccccca tcgcaggaac aaccaccgtt tgatttaaat cacatgggta ctggcagtga
     4021 taagtcggat gcgctcggcg tgccctatta taatcaacac gctatgtagt tattgtcagg
     4081 ctctgatcac agagcctgac atctccgtaa tatcttcctc aagtctcaaa tattttcgcc
     4141 attgttggcg atgagatccc gataccagta aaacgacgct ttacgtatcc gttccagcgt
     4201 tcccttccct tcgttgtctt tatcgacata aatcattccg tagcgctttt tcatttcccc
     4261 tgttccggca gaaaccaggt caatgcagcc ccacggggtg tagccaatta agtcaacacc
     4321 atcttcaact acggcttttt tcatttcccg aatatgggaa gcaaagtaat caatgcgata
     4381 gtgatcgttc accgtgccgt cagcttgtct ctggtcaacc gcaccaaatc cattttcgac
     4441 aataaacagc ggcaactgga aatgatccca gaaccagttg agtgaataac gtagccctgc
     4501 cggatcaatt tgccatcccc attcggatgt atcgatataa gggttgctga ccaaatctcg
     4561 tggttcaaca taatccagtt gcgggttatc gggcgaaaat tgtgtcgtaa aagacatgta
     4621 gtagctaaag ccgataaagt cgacacaacc actggcaaga atcgcgttat cttctggtgt
     4681 gatatcgagg ttgaatcctt tcctggcaaa gtaattcagc atatgttgcg gataatatcc
     4741 acgagcatga acatcagtaa accagtaacg acgatgcatt gctttcgtgg ccatcatcat
     4801 atcgttgggt gcacacgtca gaggatagat gggacacatg gcgatcatac agccaatgtt
     4861 aaattcagga ttgatcgatt ttccagtctg taccgccagg gcactggcaa ctaactcgta
     4921 atgtaccgcc tggtacatta tttgttcgcg ctcattgata tcttcctctg gcgaatacaa
     4981 gataccggaa ttagtaaatg gacacaggct ttcgctgaaa ttcacctgat tattgatttc
     5041 gttaaacgtc atccagtact ttactttttc tttatagcgc gtgaagaccg ttgatgcgaa
     5101 gcggataaaa aagtcgatca gtttacggtt tcgccagcca ccatattttg tcaccagatg
     5161 ataaggcatc tcaaaatgtg aaagcgtcac cacaggttcc attccctgct taaggcattc
     5221 atcgaacaga tcatcataaa attgtaaacc ctcttcattc ggctcctgtt cgtcaccttg
     5281 cggaaagatt cgtgtccagg caatggaagt tcgaaagcat ttgaatccca tctcggcaaa
     5341 taactgaata tctgttttat agcgatgata aaaatcaatt gcttcatgat tgggataatt
     5401 aagcccgtcg ataacgcctt ctgtcacttc acgcggcacc ccgtgagcgc cagcagtcat
     5461 cacatcagcg atgctgatgc cttttcctcc ttcattccag ccaccttcca actgatgcgc
     5521 ggctaccgca ccgccccata aaaaaccttt tttaaatcct gacatacaca actccttaac
     5581 taaaatagat taccaccaga cttccgcctg gatgccggcc ataaactcgt ctttgctgtt
     5641 ctcattaaac ttaaaattcg ataattcgtt atccagaata ttgatatacg ttccatagaa
     5701 gcgaatttct ggtcgtgaac ctaaaatgct ttcacccact ttcaatgcat gccagagtgt
     5761 cgttttataa gccgattcat ttagtgttac accctgctga gttttgttct gttgcttaaa
     5821 ccagcctaat tcaagccccg tctgattcca tgtattccag atccaggccg gtcttattac
     5881 agtgcgaata ctgtcaaaat cactatgagc accactttca taactataaa catcttcgcc
     5941 gtgagaatag acaagcgcgt tagccataat aatattgtca gtaagataca tctcgccctg
     6001 agagattaaa cgccaggcga tcccattggt atgatcacca tagtaatagc gaccatgcgc
     6061 catcgtatta ctggcatctg agaaactggc aaaactgctg gcataggaat tattggcaac
     6121 ctgtaacgta aattcattaa acgtatcgcg ttgcaggttt tgccgtaaaa cagaagtcag
     6181 catccagcta tctttcattt caaaataact gttgtcattt tcgttatctt gttgttgatc
     6241 cgttttatta ggtgcggaat atttagccat taatgataat gtcgcatcat cccataacgg
     6301 gatattgcga taacgaacat ccacagaatt ggtattcatc tggctggtac gcgaaaaatc
     6361 acgagagtaa acatcgacat catcacggct taaggacata tcaaacagcc ctacaccaag
     6421 tgcccagttt tcaatcccca cacccgcggc gacatccgtg gttaaggttt tccagtccag
     6481 catctggatc tcatattgcg ggagtttatg tttgccgacc cagaagtctg cctctggtgc
     6541 gaagggtaaa aaacctcgcg ttgtcaggta aatatcgctg aactgcatga tattttcatt
     6601 ggcactgtca ccaaaccagg catcgttata ctgctcaccc acgttgccat cataggtaac
     6661 gaccgcattt gccgttttac cgtcctgatt ataaacacgc tgatttaagg tcaggtcaaa
     6721 ccaaccgctc atctcattac caaaacgtcc cagagaaccc gctgcataag tttgtggtga
     6781 gccgtgatta ccagtacccc agcctgagcg gaagtacccc tgatagctga acccaatatc
     6841 atcctttata tatttactga tatctttcag ggtcacgctt tcgatagtgg ttttgtcgcc
     6901 tttactttca ataacggcaa cttgctgcga tccatttata gtatgcgctg cggcagacga
     6961 gttctgttca ccgttttcat ttttgatgtt atcagcgacg ggagatgtcg ctgatatttc
     7021 agcaagcgag gctgatttat atttgttttc cgtgatgctt ttttgtaagg tcgaaagtcg
     7081 ggatttatat actcccagtt cattctgtgt tgctttcagc tcttgtttat tttgcgacaa
     7141 ttcattttca agcaattcaa ggcgctgctc tatggttaat tttgttgcca tcgcgttcaa
     7201 tggaaacaat gctgtaataa tagaaaaaga caaaaggctg acgttaagcg tctttatatt
     7261 catgacttat ccttaagagt ataataattt cctccagcta tcgcactgga ggaaaaaatc
     7321 aggcatggag ttcttttctt aatgaaataa tttccctggc taaatcctgg cataatattg
     7381 cattcatcaa atgatcctgt gcatgaatca gaattaaatt aacttttatt ttgccacagc
     7441 cttcatcctg actaattaat gcggtctgaa tcttatgtgc ctgaagacag gcagattcag
     7501 aactggccat tagctgagtt gcgccctgcc agtctttttg cccggcacaa cgtatggctt
     7561 ccatcgcgtc agaacgtgcc tgccccgcgt tgaccagtaa ctccataaca agttcttcat
     7621 ctgcaaacat cacaatctcc ttcctgggta aatggaatta tccgttagtt gtcatgttat
     7681 tgactttgtt ggcggcaata acaaaaggta aatagatcat tgtcgccaca cctaaacata
     7741 aaaaaccaac cagtaaagcc agccagttcc ccccggttcc gaggaaagca attaaaggtc
     7801 cgggcgtagt ccagggcacg gcataagcaa ccggtggaat aatttccatc gaaacaaaga
     7861 agtaaccaat ggcacagtta acaatgggaa ccataataaa cggcaccatc atgatggggt
     7921 taagtacaat aggaaggcca aacattatcg gttcattgat attgaaaata ccggggataa
     7981 atgacatttt tgccagatca cggtattccg cacgcttaga agcgataaaa atagccaaca
     8041 ataaccccaa cgtcatacct gaaccgccgc agttggcgaa tgcatcatta atagaagtcc
     8101 aggtaatcgg atatggcgcg ccccaggtag tgccatgttg agcggcccag gagagattct
     8161 ccagattagc ctcagaaaaa acggtttctc gaattgccga tgtggtatta ggtccgtgga
     8221 tccccagcac ccacaggaaa ttacccacag cccccaggat aattaccgca aagatattcg
     8281 ttcccatatg tttgagcggc gtctggatta atgtgtaaat aagatcgttt agtcctgccg
     8341 gggatatcag tgtcaggcaa taattaagtg cggaaaagaa caccatgaca aaaaatattg
     8401 gcaataaaac tttaaatgaa cgcgctaccg caggcggtac agctgccggc atcgttatgg
     8461 tgatttttgg gtttcgagct aagcgacaaa atatttcact ggtgatcaat gcaacgataa
     8521 cagcaacaaa caacccctgc gcgccgagat atttggtcgt caggaatgct tgcccatcta
     8581 tcatctgata tggcgtataa acaataaaaa atgctcctat tgccgttaat ccgcataaaa
     8641 gatcatcttg ctcatagcta atcgccatat tcctggcgac caggaaagca atcataattg
     8701 acatgatatt tacagaacca ttcattaccg gagtaaaaat agcttgtgct ttttcaaggt
     8761 tggggaaaat gctattcaga tgcagtaatc cggcaataaa accgtctggc
//
LOCUS       DAPGWB010000171         8697 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.173, whole genome shotgun sequence.
ACCESSION   DAPGWB010000171 DAPGWB010000000
VERSION     DAPGWB010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8697)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8697)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8697
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.173"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(86..832)
                     /gene="dsbG"
                     /locus_tag="RHX79_003956"
     CDS             complement(86..832)
                     /gene="dsbG"
                     /locus_tag="RHX79_003956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415137.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HDV2199071.1"
                     /translation="MLKKILLLALLPAIAFAEELPAPVKAIEKQGITIIKTFDAPGGM
                     KGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRME
                     QSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGVIKPESP
                     ATAAAILASKDPAKTWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTP
                     AIYYMSKENTLQQAVGLPDQKTLNIIMGNK"
     gene            1204..1767
                     /gene="ahpC"
                     /locus_tag="RHX79_003957"
     CDS             1204..1767
                     /gene="ahpC"
                     /locus_tag="RHX79_003957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003858764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HDV2199072.1"
                     /translation="MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFT
                     FVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG
                     ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAS
                     HPGEVCPAKWKEGEATLAPSLDLVGKI"
     gene            1896..3461
                     /gene="ahpF"
                     /locus_tag="RHX79_003958"
     CDS             1896..3461
                     /gene="ahpF"
                     /locus_tag="RHX79_003958"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017455864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HDV2199073.1"
                     /translation="MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA
                     ELSDKVTFKEDNSLPVRKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPS
                     KEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQ
                     NEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIV
                     GSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVH
                     VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGE
                     DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA
                     DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG
                     LLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKAS
                     LSAFDYLIRTKTA"
     gene            complement(3582..4010)
                     /gene="uspG"
                     /locus_tag="RHX79_003959"
     CDS             complement(3582..4010)
                     /gene="uspG"
                     /locus_tag="RHX79_003959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspG"
                     /protein_id="HDV2199074.1"
                     /translation="MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSA
                     SLSLHRFAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAE
                     ELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR"
     gene            4231..5469
                     /locus_tag="RHX79_003960"
     CDS             4231..5469
                     /locus_tag="RHX79_003960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent formaldehyde
                     dehydrogenase"
                     /protein_id="HDV2199075.1"
                     /translation="MKALTYHGPHHVQVENVPDPGIEQADDIILRITATAICGSDLHL
                     YRGKIPQVKHGDIFGHEFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRMQQYA
                     ACENTNAGKGAALNKKQIPAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLL
                     SDDKALFLSDILPTAWQAAKNAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVD
                     HHPYRLRFAADRYGAIPINFDEDSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTET
                     VLTNLKLEGSSGKALRQCIAAVRRGGIVSVPGVYAGFIHGFLFGDAFDKGLTFKMGQT
                     HVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGAQS
                     AEAAQKAVSGLVNAMPGGTI"
     gene            complement(5700..6110)
                     /gene="rnk"
                     /locus_tag="RHX79_003961"
     CDS             complement(5700..6110)
                     /gene="rnk"
                     /locus_tag="RHX79_003961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HDV2199076.1"
                     /translation="MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC
                     SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR
                     VGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL"
     gene            complement(6340..7146)
                     /gene="rna"
                     /locus_tag="RHX79_003962"
     CDS             complement(6340..7146)
                     /gene="rna"
                     /locus_tag="RHX79_003962"
                     /EC_number="4.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease I"
                     /protein_id="HDV2199077.1"
                     /translation="MKAFWRNAALLAVSLLPFSSANAVALQAKQYGDFDRYVLALSWQ
                     TGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFG
                     CATRPIPNLPEARASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACF
                     GFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKL
                     TCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPGNCGKTFVIDKVGY"
     gene            complement(7260..>8697)
                     /gene="citT"
                     /locus_tag="RHX79_003963"
     CDS             complement(7260..>8697)
                     /gene="citT"
                     /locus_tag="RHX79_003963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="citrate/succinate antiporter CitT"
                     /protein_id="HDV2199078.1"
                     /translation="KLLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAMIVGMILEPI
                     PATAISFIAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSSTTVWLVFGAF
                     IFALGYEVSGLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFP
                     VIKNLPPLFKSFPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIA
                     GIQISWLQWFLCFLPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDELKTMGALTR
                     REWTLIGLVLLSLGLWVFGSEVINATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLV
                     NLATLVVMANGLTRSGFIDWFAGTMSTHLEGFSPNATVIVLVLVFYFAHYLFASLSAH
                     TATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSKD
                     YWRLGAIFGVIYISMLLLVGWPILAMWN"
BASE COUNT         2270 a         2126 c         2207 g         2094 t
ORIGIN      
        1 gccacttagg gcagagcgag caattcatgc ttttttagga tggttgaaaa gcagagatgt
       61 atttcaacca tccatgaatt atcttttatt tattccccat aatgatatta agcgttttct
      121 gatcgggcaa ccccacggcc tgttgtagcg tattttcctt actcatgtaa tagatagccg
      181 gcgtgacatt tgcccccaga tcgtccatca gtttctcatt gtcacttaac actttcattt
      241 gctctgtact tacgtttgca ggcacgttta gcttaagctt gccaccagag gcttcatatt
      301 gttgccaggt ttttgcggga tctttggagg caagaattgc cgctgctgtc gccgggcttt
      361 ctggcttgat aaccccaacc aacaatgttc ttaattgcac tttgccagaa tctacccacg
      421 ggcgcgcctg ctgccagaac tgtttacaat atgggcagaa cggatcggcg aagacgtaga
      481 caatgaccgg cgcatctttt ttaccgtcga ggagccagtg ggattgttcc atccgttgcc
      541 acatttcgcg tccggctggt gcgtaaattt ctttttcgat aagtgtgtta ctcaggtttt
      601 cacctttctc gttgtacatg taaccagaga tagcgtgctt accatctgga gtcaggtaga
      661 tggtgacgcc catatcctga tactttccga gataaccttt cattcctccg ggggcatcga
      721 atgttttgat gattgtaatg ccctgttttt caatcgcttt tactggagca ggaagttcct
      781 ctgcgaaggc gattgcagga agcagagcca gtaaaagtat cttttttaac attaatttgt
      841 ccttttcagt cagtgcaaaa gtcgagtaaa aggcataacc tatcactgtc ataggtaaga
      901 gcttagatca ggtgattgcc ctttgtttat gagggtgttg taatccatgt cgttgttgca
      961 tttgtaaggg caacacctca gcctgcaggc aggcactgaa gataccaaag ggtagttcag
     1021 attacacggt cacctggaaa gggggccatt ttacttttta tcgccgctgg cggtgcaaag
     1081 ttcacaaagt tgtcttacga aggttgtaag gtaaaactta tcgatttgat aatggaaacg
     1141 cattagccga atcggcaaaa attggttacc ttacatctca tcgaaaacac ggaggaagta
     1201 tagatgtcct tgattaacac caaaattaaa ccttttaaaa accaggcatt caaaaacggc
     1261 gaattcatcg aaatcaccga aaaagatacc gaaggccgct ggagcgtctt cttcttctac
     1321 ccggctgact ttactttcgt atgcccgacc gaactgggtg acgttgctga ccactacgaa
     1381 gaactgcaga aactgggcgt agacgtatac gcagtatcta ccgatactca cttcacccac
     1441 aaagcatggc acagcagctc tgaaaccatc gctaaaatca aatatgcgat gatcggcgac
     1501 ccgactggcg ccctgacccg taacttcgac aacatgcgtg aagatgaagg tctggctgac
     1561 cgtgcgacct tcgttgttga cccgcagggt atcatccagg caatcgaagt taccgctgaa
     1621 ggcattggcc gtgacgcgtc tgacctgctg cgtaaaatca aagcagcaca gtacgtagct
     1681 tctcacccag gtgaagtttg cccggctaaa tggaaagaag gtgaagcaac tctggctccg
     1741 tctctggacc tggttggtaa aatctaagtt ccgcaatcgc gtaattaatc gggtgctgcg
     1801 gcacccgatt ttcttccccg caccatgatg caagctgcat ccaggtagcc gcagaggccg
     1861 cttgcatgat gatgtttaaa gcccaggaga taaacatgct cgacacaaat atgaaaactc
     1921 aactcaaggc ttaccttgag aaattgacca agcctgttga gttaattgcc acgctggatg
     1981 acagcgctaa atcggcagaa atcaaggaac tgttggctga aatcgcagaa ctgtcagaca
     2041 aagtcacctt taaagaagat aacagcttgc cggtgcgtaa gccgtctttc ctgatcacca
     2101 acccaggttc caaccagggg ccacgttttg caggctcccc gctgggccac gagttcacct
     2161 cgctggtact ggcgttgcta tggaccggtg gtcatccgtc gaaagaagcg cagtctctac
     2221 tggagcagat tcgccatatt gacggtgatt ttgaattcga aacctattac tcgctctctt
     2281 gccataactg cccggacgtg gtgcaggcgc tgaacctgat gagcgtactg aacccgcgca
     2341 tcaagcacac tgcaattgac ggcggcacct tccagaacga aatcaccgat cgcaacgtga
     2401 tgggcgttcc ggcagtgttc gtaaacggga aagagtttgg tcagggccgc atgacgttga
     2461 ctgaaatcgt tgccaaaatt gatacgggcg cggaaaaacg tgcggcagaa gagctgaaca
     2521 agcgtgatgc ttatgacgta ttaatcgttg gttccggccc ggcgggtgca gctgcagcaa
     2581 tttactccgc acgtaaaggc atccgtaccg gtctgatggg cgaacgtttt ggtggtcaga
     2641 tcctcgatac cgttgatatc gaaaactaca tttctgtacc gaagactgaa gggcagaagc
     2701 tggcaggcgc actgaaagtt cacgttgatg aatacgacgt tgatgtgatc gacagccaga
     2761 gcgccagcaa actgatccca gcagcagttg aaggtggtct gcatcagatt gaaacagctt
     2821 ctggcgcggt actgaaagca cgcagcatta tcgtggcgac cggtgcaaaa tggcgcaaca
     2881 tgaacgttcc tggcgaagat cagtatcgca ccaaaggcgt gacctactgc ccgcactgcg
     2941 acggcccgct gtttaaaggc aaacgcgtag cggttatcgg cggcggtaac tccggcgtgg
     3001 aagcggcaat tgacctggcg ggtatcgttg agcacgtaac gctgctcgaa tttgcgccag
     3061 aaatgaaagc cgaccaggtt ctgcaggaca aactgcgcag cctgaaaaac gtcgacatta
     3121 ttctgaatgc gcaaaccacg gaagtgaaag gcgacggcag caaagtcgtt ggtctggaat
     3181 atcgagatcg tgtcagcggc gatattcaca acatcgaact ggccggtatt ttcgtccaga
     3241 ttggtctgct gccgaacacc aactggctgg aaggcgcagt cgaacgtaac cgcatgggtg
     3301 agattatcat tgatgcgaaa tgcgaaacca acgtcaaagg cgtattcgca gcgggtgact
     3361 gtacgacggt tccgtacaag cagatcatca tcgccactgg cgaaggtgcc aaagcctctc
     3421 tgagtgcttt tgactacctg attcgcacca aaactgcata agaagaagta agattcacct
     3481 gcaattgctt agccgccggg gtcaaacctg gcggcttttt tatggcatta aaaagccctg
     3541 ccgggatggc tccgggcagg gcgggatatt tattctggca attaacgcac aaccagcacc
     3601 ggcagattgg catggcggat cacgctcgag gcgttagaac ctaacagatg ggtcgaaatc
     3661 gatgggttgc gagaaccaat aactacaaca tcagccccca gttcttctgc caactcattg
     3721 acttcatccc gcacgctacc aaaacggaca tgttgtttaa tgcgggaagg atcgatggtg
     3781 aagtggctga ccatcgtttg cagacgttct tctgcttcat gttgcagatg ctcttcaaaa
     3841 cgacgcacat cagcggcaaa acggtgcagg ctcaggctgg ctgacccggg tagtacgtga
     3901 agtagatgaa taactccgtc atcctgggcg aggaattcag cgtggcgaac agctttgtcg
     3961 ctcaattcca tttcaaatac atcaactggc ataatgattg tcttatacat aaccctttct
     4021 ccctgttaat catgaacaaa tcattcgcca tgattataat atttatccct gatatttgtc
     4081 tggttctttt tccttacgaa cggtttctgt gattaatata ttctcactga acaccaggaa
     4141 ttctcccaaa acctgcggta ccgcccgttt tcccgctgtg atagctaccc ttaaagactg
     4201 actctttttt gaactgtctc tggaggttgc atgaaagcat tgacttatca cggcccacat
     4261 cacgttcagg tagaaaatgt tcccgatccg ggcattgaac aggcagatga tattattctg
     4321 cgtattacgg caacggcgat ctgtggctct gacctccatc tttatcgagg caaaataccc
     4381 caggttaaac atggcgatat ttttggtcat gaatttatgg gggaagtcgt tgaaaccgga
     4441 aaggacgtaa aaaatttgca aaaaggcgac cgggtggtaa ttccgtttgt cattgcttgt
     4501 ggcgactgtt ttttctgtcg aatgcagcaa tatgccgcct gcgaaaatac caatgcgggt
     4561 aaaggcgctg cgctcaataa aaaacagata ccagctcccg cggcattgtt tggttatagt
     4621 cacctgtatg gtggcgttcc tggtggacag gcggaatatg tccgcgtccc taaagggaat
     4681 gtggggccgt ttaaagtacc gcctttgctt tcagatgata aagccctttt cctttctgat
     4741 attctgccaa cggcatggca ggcagcaaaa aatgcgcaga tccaacaagg ttcaagcgtt
     4801 gcagtctatg gtgccggtcc agtgggattg ttgacaatcg cctgtgcacg gttgctcggt
     4861 gcggaacaga tttttgttgt tgatcatcat ccctaccgct tgcgtttcgc cgctgaccgc
     4921 tacggcgcga tcccgattaa tttcgatgaa gatagcgatc cggcacagtc aattattgaa
     4981 caaacggcag gtcaccgggg cgtggatgca gtaatagacg ccgtcggttt tgaagcgaaa
     5041 ggcagcacca cggaaacggt gctgactaac ctgaaactgg agggcagcag cggtaaagcg
     5101 ttgcgccagt gtattgcggc ggtcaggcgt ggcggcattg ttagcgtacc gggcgtctac
     5161 gctggattta ttcacggttt cctgtttggc gacgcctttg ataaagggtt gacgtttaaa
     5221 atgggacaga cccacgttca cgcatggctg ggagaattat taccgttaat tgagaaagga
     5281 ttactgaaac cagaagaaat tgttacccac tatatgccgt ttgaagaggc cgcccgggga
     5341 tatgagattt tcgaaaaacg tgaagaggag tgccgtaagg tgattctggt acccggtgca
     5401 caaagcgcag aggcggcgca gaaggcggtt tcaggtctgg tgaatgcgat gccgggggga
     5461 acaatatgat cgtcaggagt ggttttcgag gtaaaggaca gccatgacga taatcgccgc
     5521 cataatcaga aatcctatca ggatgtaaaa tgcttctgcc atggttattc ccacaaacga
     5581 aacggaataa ttttgcagca aaagtgaaca gtgagaacca ggaaaaattg ctgattttgc
     5641 gtaaagagga tgcgagtgca tcctctgggc aaagcgagtt atcgcttgtg cagatgggat
     5701 taaagcaggt agtcgccagc agcttctggc tggtattcga gttccagcac ttcaaggtgg
     5761 gttgcaacgc cgcccggaag ttcccagtga atggaatcgc caacgcgcag ccccagcagt
     5821 gcggcaccta ccggagccat aacggaaagc tgagtattgc tatcggtcat ttttgccgga
     5881 tacaccagcg tgcgcacacg cacttcgcca tcgctaagat tgcggaattt aacccggctg
     5941 ttcattgtca ccacgtcgtg tggcatctct tctggcgaac acatttgggc gcgatccaac
     6001 tctgcgttta acgcgtcggc gattggcaaa ccagcatagg cgggttgctc cagcagaata
     6061 tcgatgcgtt cggcatccag gtcgttaatg atgatagttg gtctggacat ttttactcca
     6121 tgtcgtcggt actgcgagtg tcgcagataa acatacccaa aagaaaaccc tcaccgtcag
     6181 gcggcgaggg tttaactcac atgatgatac tgactgttgc tcactctttg aagtgatttg
     6241 cgtcacattc agggaattcc tcaatgcagc gcattatgta taattcttaa tcgtcacggt
     6301 ttatggaaga cgaattagcg tgttttgtaa atcagatgat taataaccca ctttatcaat
     6361 cacaaaggtt ttgccacagt tgcctgggtg tggttgtggc aagaatgagt ttgcagaaag
     6421 cggagcgttg atggcgtcag ctttgatcga gatctgaatt tcagtcaaat acgcagggtt
     6481 accctggcac gttagcttaa ctgctttcac gttctctttt ccccagcttt tggcaaaggc
     6541 ggcgtcaaag tcacggcggc tcactgtttt accgtaatta tccgcaagga attttccggc
     6601 ttcgctctct ttaatttctt gattcaggcg taccatcgta ccgaagtatg cgtccggatc
     6661 aaaaccaaag caggcaccgt gtttggcata ttcgtagcgt tccaggcagg aacgtccgcc
     6721 agctcctggc atgacttcac ttagtttagc ggccgtttcc agtgataacc cggtttccgg
     6781 cgatgaacac attcggctgg cgcgtgcttc tggtagattc gggattgggc gagtagcgca
     6841 accgaagcgc atccagcggc gttcatcaac accacgggca gcaaccgatt taggcaatcc
     6901 tggccacaga ccatgtacgg tcagaaaatc agctttgttg gtcgtttcgg tttgcaggcg
     6961 acattcatct cgttcgttac gatttcgatc gtgttgactc tggcaaaatc cggtttgcca
     7021 ggagagggcc aggacatagc gatcaaaatc gccatactgt tttgcctgca acgctacggc
     7081 gttggcagaa gagaagggaa gcagagaaac cgcgagcaac gcggcgttac gccagaatgc
     7141 tttcataatg ggtgtggaac tcatacatac actgaatact atctattaaa tcataaaaaa
     7201 gcccgccagg tgggctaacc tggcgggcgt gatgatttat tcagcgtttg gcgaacgtat
     7261 tagttccaca tggcgagaat cggccagcca accaacagca acatagagat gtaaatcacc
     7321 ccgaagattg cgccaagacg ccagtaatct tttgatttca catagccaca gccgtaaata
     7381 atcaccccag gaccggttgc atacggcgtc agacagccca tgataccgat agacagcacc
     7441 agcaggatac acagttgttc cattggtacg cccggaatac ctttaccgac ggccagaata
     7501 accggcagca tggttgcggt gtgcgcagac aggctggcaa acaggtagtg tgcaaagtag
     7561 aacaccagaa ccagtacaat caccgttgcg tttggtgaga atccttccag gtgcgtactc
     7621 atggtaccgg cgaaccagtc aataaagcca gaacgagtca ggccgttagc catcacaacc
     7681 agagttgcca ggttgaccag cgtgttccat gcgctgttat agcgggtaat atctttccaa
     7741 ggcacaacgt gcagggccag cattagcgaa actgccagca gaccaactgc agtagcatta
     7801 atgacttcac tgccaaaaac ccacaaacct aagctgagca atacaaggcc aatcagtgtc
     7861 cactctctgc gtgtcagcgc acccatggtt ttcagttcat cacccgccca ggttgccact
     7921 tcttcactgt gtgtgatttc cggtttgtac agcacgtagg aaagccacgg cgcaatgata
     7981 agcaagataa ccccaaccgg caggaagcag aggaaccact gcaaccagct aatctggata
     8041 ccggcaattt tgctgacgaa ctccagaccc agcacgtttg gtgccgcacc ggtgacaaac
     8101 atggacgaac tcagactggt actaatgacc atcatccaca tcaaatagcc gccaatacga
     8161 cgcgcggacg gatcgttggg gaatgattta aacaacggcg gcaggttttt aatgaccgga
     8221 aaaaccgtac ccccggtacg cgcggtgttg gacggtgtaa acggtgccag cagaatgtcg
     8281 ataatgacaa tcgcataacc caacgtcagc gtgcgtttgc ccatgaattt caccaggaaa
     8341 agggcaatgc gacgacctaa cccggaaact tcatacccta atgcaaaaat aaatgcgcca
     8401 aataccagcc ataccgtggt gctggaaaaa ccagccagac cccatttcag cgcctgtttt
     8461 tgcgcattaa acgctgggtc agctaattct ttggcatcaa agagcaggta attactgcca
     8521 ataacgcaaa tagtaaccgc aataaaactg atcgctgttg ccggaattgg ctcgaggatc
     8581 atgccgacaa tcattgccac aaacacagcg aagtaatgcc atgcctgtgg tggcataccg
     8641 tcggggacag ggataagaaa catgacaccc atcaccacca gtggggccaa tagtttc
//
LOCUS       DAPGWB010000172         8647 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.174, whole genome shotgun sequence.
ACCESSION   DAPGWB010000172 DAPGWB010000000
VERSION     DAPGWB010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8647
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.174"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            2..1726
                     /gene="iucA"
                     /locus_tag="RHX79_003964"
     CDS             2..1726
                     /gene="iucA"
                     /locus_tag="RHX79_003964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucA"
                     /protein_id="HDV2199079.1"
                     /translation="MTLPSEKPATDVAAQCFLNALIRETTDWKLTEYPPDELIIPLDE
                     QKSLHFRVAYFSPTQHHRFAFPARLVTASGSYPVDFTTLSRLIIDKLRHQLFLPVPLC
                     ETFHQRVLESHAHTQQAIDARHDWTALREKALNFGEAEQALLTGHAFHPAPKSHEPFN
                     RREAERYLPDMAPHFPLRWFSVDKTQIAGESLHLNLQQRLTRFAAENAPQLLNELSDN
                     QWLFPLHPWQGEYLLQQGWCQALVAKGLIKDLGEAGTSWLPTTSSRSLYCATSRDMIK
                     FSLSVRLTNSIRTLSVKEVKRGMRLARLAQTDGWQMLQVRFPTFRVMQEDGWAGLLDL
                     NGNIMQESLFALRENLLVDQPKSQTNVLVSLTQAAPDGGDSLLVSAVKRLSDRLGITV
                     QQAAHAWVDAYCQQVLKPLFTAEADYGLVLLAHQQNILVQMLGDLPVGFIYRDCQGSA
                     FMPHATDWLDSIGEAQAENIFTHEQLLRYFPYYLLVNSTFAVTAALGAAGLDSESNLM
                     ARVRASLAEVRDQVTHKTCLNYVLESPYWNVKGNFFCYLNDHNENTIVDPSVIYFDFA
                     NPLQAQEV"
     gene            1727..2674
                     /gene="iucB"
                     /locus_tag="RHX79_003965"
     CDS             1727..2674
                     /gene="iucB"
                     /locus_tag="RHX79_003965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(6)-hydroxylysine O-acetyltransferase"
                     /protein_id="HDV2199080.1"
                     /translation="MSEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGW
                     LCDALDQIFIAAPQLSAVALPWAEWCEEPQALTLFGQVKSDIIHRTAFWQLPLWLSSP
                     ANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRW
                     MNDPRVEYFWEQSGSLEVQTAYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIG
                     RHYSWQPFDRGLHLLVGEQQWRGAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQR
                     LFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL"
     gene            2674..4416
                     /gene="iucC"
                     /locus_tag="RHX79_003966"
     CDS             2674..4416
                     /gene="iucC"
                     /locus_tag="RHX79_003966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucC"
                     /protein_id="HDV2199081.1"
                     /translation="MNHKDWDFVNRRLVAKMLSEMEYEQVFHAESQGDDHYCINLPGA
                     QWRFIAERGIWGWLWIDAQTLRCTDEPVLAQTLLMQLKPVLSMSDATVAEHMQDLYAT
                     LLGDLQLLKARRGLSASDLINLDADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEY
                     ANTFRLHWLAVKREHMIWRCDNDLDIQQLLTAAMDPQEFTRFSQVWQENGLDHNWLPL
                     PVHPWQWQQKIATDFIADFAEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPL
                     TIYNTSCYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYA
                     ALARAPYRYQEMLGVIWRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLD
                     AETWLTQLFRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLV
                     KEAFPEMDSLPQEVRDVTSRLSADYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQ
                     LLAAVLSDYMNKHPQMSERFALFSLFRPQIIRVVLNPVKLTWPDQDGGSRMLPNYLEN
                     LQNPLWLVTQEYES"
     gene            4413..5750
                     /gene="iucD"
                     /locus_tag="RHX79_003967"
     CDS             4413..5750
                     /gene="iucD"
                     /locus_tag="RHX79_003967"
                     /EC_number="1.14.13.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent L-lysine N(6)-monooxygenase"
                     /protein_id="HDV2199082.1"
                     /translation="MKKSVDFIGVGTGPFNLSIAALSHQIEELNCLFFDEHPHFSWHP
                     GMLVPDCHMQTVFLKDLVSAVAPTNPYSFVNYLVKHKKFYRFLTSRLRTVSREEFSDY
                     LRWAAEDMNNLYFSHTVENIDFDKKSRLFLVQTSRGEYFARNICLGTGKQPYLPPCVK
                     HVTQSCFHASEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRN
                     NFNALDEAAFADEYFTPEYISGFSGLKEDIRHQLLDEQKMTSDGITADSLLTIYRELY
                     HRFEVLRKPRNIRLLPSRSVTTLESSGPGWKLLMEHHLDRGRESLESDVVIFATGYRS
                     ALPQILPSLMPLITMHDKNTFKVRDDFTLEWSGPKENNIFAVNASMQTHGIAEPQLSL
                     MAWRSARILNRVLGRDLFDLSMPPALIQWRSGSRKKPQPEAASLTHYTTNIQE"
     gene            5756..7951
                     /gene="iutA"
                     /locus_tag="RHX79_003968"
     CDS             5756..7951
                     /gene="iutA"
                     /locus_tag="RHX79_003968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709458.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric aerobactin receptor IutA"
                     /protein_id="HDV2199083.1"
                     /translation="MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAE
                     MAQTTWVIENAELEQQIQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLID
                     GVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMME
                     FEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQ
                     TGLQHSNRLDIMGTGTLNIDESRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPY
                     VSKGLNSDRIPGTERHLISLQYSDSDFLRQELVGQVYYRDESLRFYPFPTVNANKQAT
                     AFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLN
                     NHKIYTTGRYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYMQQQK
                     IAAGKAISADAIPGGSVDYDNFLFNAGLLMHITERQQAWFNFSQGVALPDPGKYYGRG
                     IYGAAVNGHLPLTKSVNVSDSKLEGVKVDSYELGWRFTGDNLRTQIAAYYSLSNKSVE
                     RNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKE
                     SSPSKATAYISWAPEPWSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWLLPVGTLSF
                     SVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRGRTFGLNYSVLF"
     gene            complement(8123..>8647)
                     /locus_tag="RHX79_003969"
     CDS             complement(8123..>8647)
                     /locus_tag="RHX79_003969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HDV2199084.1"
                     /translation="QFVAERPDQLWVADFTWVSTWQGFVYVAFIIDVFAGYIVGWQVS
                     SSMETTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDS
                     YDNAMAESINGLYKAEVIHRKSWKNRTEVELATLTWVDWYNNRRLLGRLGHTPPAEAE
                     KAYYASIGNNDLAA"
BASE COUNT         2014 a         2247 c         2315 g         2071 t
ORIGIN      
        1 tatgaccctg ccctctgaaa aaccagccac agatgtggct gcgcagtgct tcctgaatgc
       61 actgattcgt gaaaccacag actggaaact gacagaatac ccgccagacg aattgatcat
      121 cccgctggat gagcagaaat cgctccattt cagagtggct tatttctccc caacccagca
      181 tcaccgcttt gcatttcctg cacgtctggt cacggcatca ggcagttatc ctgtcgactt
      241 taccactctc tcccggctta ttattgataa gctacggcat caactgtttc tgcccgttcc
      301 cctctgcgaa actttccacc agcgcgtgct ggaaagccac gcccatacgc aacaggcaat
      361 tgatgcccgt catgactgga ccgccctgcg tgaaaaagcg ttgaattttg gcgaagctga
      421 gcaggcgctg ctgacaggac acgctttcca ccctgcgcct aagtctcatg aaccgtttaa
      481 ccggcgggag gctgaacgct acctgcctga tatggcaccc cacttcccac tgcggtggtt
      541 ttcggtggat aaaacgcaaa tcgccggtga aagtttgcat ctcaaccttc aacagcggct
      601 gacgcgattt gccgcagaga atgcgcctca gttactcaac gaattaagtg acaaccaatg
      661 gctgttcccg ttgcacccgt ggcaggggga atatcttttg cagcaggggt ggtgccaggc
      721 acttgttgct aaagggctga ttaaagactt aggtgaggcc ggcacgtcgt ggctgccgac
      781 cacctcttcc cgttccctct actgtgccac cagccgcgat atgatcaagt tctccctgag
      841 cgtacggctg accaactcca tccgtactct gtccgtgaaa gaagtgaagc gtgggatgcg
      901 cctggcacgc ctggctcaaa ccgacggctg gcagatgcta caggtccgct tcccgacttt
      961 ccgggtaatg caggaggatg gctgggccgg gctgctcgat cttaacggca acatcatgca
     1021 ggaaagtctg tttgccctgc gtgaaaatct gctggtggat cagccgaaaa gccagaccaa
     1081 cgtactggtc tccctgactc aggccgcacc tgatggcggt gattcgctgc tggtttcggc
     1141 ggtaaaacgc ctgagcgatc gcctcggtat cactgtgcaa caggccgccc atgcatgggt
     1201 cgatgcatac tgtcagcaag tgctaaagcc gctgtttacg gctgaagcgg attacggcct
     1261 ggtgctgctg gcgcatcagc aaaatattct tgtccagatg cttggggatc tgccggtcgg
     1321 atttatttac cgtgactgtc agggcagcgc ttttatgcct cacgcgacag actggctcga
     1381 ttctattggc gaggcgcagg cggaaaatat tttcacccat gagcagttgc tgcgctattt
     1441 cccttattac ctgctggtta actccacttt tgctgtgacc gctgcgctgg gggctgccgg
     1501 gctggacagc gaatcgaatc tgatggctcg tgtacgagca tcgctggctg aagtgcgtga
     1561 tcaggtgact cataaaacct gtctcaacta cgtgctggaa agtccgtact ggaacgtaaa
     1621 aggtaacttt ttctgttatc tgaacgatca taacgagaac accattgttg acccttcggt
     1681 gatctatttc gatttcgcta acccgctgca ggctcaggag gtctgaatgt ctgaggcaaa
     1741 cattattcac agcagatatg gactgcgctg tgaaaaactc gacaagcccc tgaatcttgg
     1801 ctggggactg gacaatagcg cggtgttgca ctgtcccggg gagctgccga cagggtggct
     1861 gtgcgatgcg ctggatcaga tatttatcgc cgcaccacaa ctgtcagcag tggctctccc
     1921 ctgggccgaa tggtgtgagg agccacaggc gctgacgctt tttgggcagg taaaaagcga
     1981 cattatccat cgtaccgcct tctggcagtt accgttatgg ttgagttcac cggcaaaccg
     2041 ggcctccggt gaaatggttt ttgatgcaga gcgtgagatt tatttcccgc agcgcccacc
     2101 ccgtccgcag ggtgaggttt accgccgtta cgatccacgt attcgcagga tgctgagttt
     2161 ccgcattgcc gatcccgttt ctgatgcaga acgtttcacc cgctggatga atgatccgcg
     2221 cgttgagtat ttctgggagc aaagtggctc actggaggta cagaccgcct atctggagcg
     2281 ccagctcacc ggtaaacatg catttccgct gattgggtgc ttcgacgatc ggccattcag
     2341 ctattttgaa atctactggg cggcggaaga ccgcattggt cgtcactatt cgtggcagcc
     2401 ctttgaccgt ggcctgcatc tgctggttgg tgaacagcaa tggcgcgggg cccactatgt
     2461 gcaaagctgg ctgcgcgggc tgacacatta cctgctgctg gatgagcccc gtacgcagcg
     2521 cacagtactg gagccacgca ccgataacca gcgcctgttc cgccatcttg agcctgcggg
     2581 ataccggaca attaaagagt tcgacttccc acataagcgc tcgcgcatgg tgatggcgga
     2641 tcgtcatcac ttcttcacgg aggtcggtct gtaatgaatc acaaggactg ggattttgtt
     2701 aaccgtcggc tggtggcaaa aatgttgtct gagatggagt atgagcaggt tttccacgcg
     2761 gaatctcagg gcgatgacca ctactgcatt aacctgccgg gagcacaatg gcgcttcatc
     2821 gctgaacgtg gtatctgggg ctggctgtgg attgatgccc aaacgttgcg ctgcacggac
     2881 gaaccagtac tggcgcagac gctgctgatg cagctaaagc cggtgctgtc aatgagtgat
     2941 gccactgttg cagagcatat gcaggatttg tatgccacgc tactgggcga cctgcaactg
     3001 ctgaaggccc gtcgcggact gagtgccagt gacctgatta atcttgatgc cgatcgtctg
     3061 caatgcctgc tgagcggtca tcctaaattc gtttttaata aaggtcgccg tggctggggc
     3121 aaagaggcgc tggaacgata tgcgccagag tatgccaaca ccttcagact gcactggctg
     3181 gcggtaaaac gtgaacatat gatctggcgc tgcgacaacg atctggatat tcagcagttg
     3241 ttgactgccg caatggatcc gcaggagttt acacgcttca gtcaggtctg gcaggaaaac
     3301 gggctggatc acaactggct gccgctgccg gtacatccgt ggcagtggca gcaaaaaatc
     3361 gccaccgact tcatcgctga ttttgccgaa ggcaggatgg tgtctctcgg cgagtttggc
     3421 gaccagtggc tcgcccagca gtcgctgcgt accctgacca acgccagccg ccggggaggg
     3481 ctggatatca agctgccgct gaccatctac aacacctcat gctaccgggg gatccctggc
     3541 agatatatcg ctgccggacc actggcttca cgctggctgc aacaggtttt tgcgaccgac
     3601 gccaccctgg tgcaaagcgg cgcagtgatc cttggtgaac cggctgcagg ctatgtgtcc
     3661 catgaaggct atgccgcgct tgcccgggct ccctatcgct accaggaaat gcttggtgtt
     3721 atctggcggg agaatccgtg ccgctggctg aaaccggatg aaagtccggt tctgatggca
     3781 acactgatgg agtgcgacga aaacaatcag ccgctggcag gcgcatatat cgaccgctcc
     3841 ggactggacg ctgaaacctg gcttacgcaa ttgttccggg tggttgtggt tccgctgtat
     3901 cacctgcttt gccgctacgg tgtcgcgctt attgcacacg gacaaaatat aacgctcgcc
     3961 atgaaagagg gggtaccaca gcgtgttctg ctgaaagact tccagggcga tatgcggttg
     4021 gtgaaagaag cgtttcccga aatggactct ttgcctcagg aggtgcgtga tgtcacatcc
     4081 cgtctgagtg cggactactt aatccatgat ttgcagacgg gtcacttcgt gacagtactg
     4141 cgttttattt cgccactgat ggttcgtctt ggcgtacctg aaaggcgatt ttatcaactg
     4201 ctggcagcag tgttgagtga ttacatgaac aaacatccac aaatgtcaga gcgttttgcg
     4261 cttttctcac tcttcaggcc acaaatcatt cgcgtggtgc tgaacccggt aaaactgacc
     4321 tggccggacc aggatggcgg cagtcgcatg ctgccgaatt accttgagaa tctgcaaaat
     4381 ccgctgtggc tggtaactca ggaatatgaa tcatgaaaaa aagtgtcgat tttattggtg
     4441 tcgggacagg gccatttaat ctcagtattg ctgcattgtc acatcagatc gaagaactga
     4501 actgtctctt ctttgacgaa catcctcatt tttcctggca tccgggtatg ctggtaccgg
     4561 attgtcatat gcagactgtc tttctgaaag atctggtcag tgcagttgca cctacaaatc
     4621 cctacagctt tgttaactat ctggtgaagc acaaaaagtt ctatcgcttc cttacaagca
     4681 gactacgtac agtatcccgt gaagagtttt ctgactatct ccgctgggct gctgaagata
     4741 tgaataacct gtatttcagt cataccgttg aaaatattga tttcgacaaa aaaagtcgat
     4801 tgtttctggt tcagaccagt cggggagaat attttgcccg caatatctgc cttggtacag
     4861 gaaaacaacc ttatttacca ccctgtgtga agcatgtgac acaatcctgt ttccatgcca
     4921 gtgaaatgaa tcttcgtcgg ccggacctga gtggaaaacg gataactgtg gttggtggag
     4981 gacagagtgg tgcagacctg ttccttaatg cattacgcgg ggaatgggga gaagcggcgg
     5041 aaataaactg ggtctcacgg cgtaataatt ttaacgcact ggatgaggct gcttttgctg
     5101 atgagtattt tacacctgaa tatatttcag gcttctccgg actgaaggaa gatattcgcc
     5161 atcagttact ggatgagcag aaaatgacat cggatggcat cactgccgat tctttactga
     5221 ccatttatcg tgagttgtac caccgttttg aagttctgag aaaaccaaga aatatccgtc
     5281 tgctacccag ccgctcggta acaactctgg aaagtagtgg tccgggctgg aagttattga
     5341 tggaacatca tctggatcgg ggcagagaga gcctggaaag tgatgtggtg attttcgcca
     5401 caggttaccg ttctgcattg ccacaaatac ttccctcact gatgcccttg atcaccatgc
     5461 acgataagaa cacctttaaa gtgcgtgatg acttcactct ggaatggagt ggcccgaaag
     5521 aaaataacat ctttgcggtc aacgccagca tgcaaactca tggcatcgcc gaaccccagc
     5581 tcagcctgat ggcctggaga tctgcacgta ttcttaatcg cgtactgggg cgtgatttat
     5641 tcgatctcag tatgccgccc gcactgattc agtggcgcag cggcagccgg aaaaaaccgc
     5701 agccggaggc tgcttcttta actcactata caacaaatat tcaggaataa cgatgatgcg
     5761 caaaaagtat atgccccggg ctcttggtcc gctgcttctt gtcgtgttgt caccagctgt
     5821 cgcccagcaa aacgatgata atgagatcat agtgtctgcc agccgcagca atcgaactgt
     5881 agcggagatg gcgcaaacca cctgggttat cgaaaatgcc gaactggagc agcagattca
     5941 gggcggtaaa gagctgaaag acgcactggc tcagttaatc cccggccttg atgtcagcag
     6001 ccagagccga accaactacg gtatgaacat gcgtggccgc ccgctggttg tcctgattga
     6061 cggtgtgcgc ctcaactctt cacgttccga cagccgacaa ctggactctg tcgatccttt
     6121 taatatcgac catattgaag tgatctccgg cgcgacggcc ctgtacggtg gcgggagtac
     6181 cggagggttg ataaacatcg tgaccaaaaa aggccagccg gaaaccatga tggagtttga
     6241 ggctggcaca aaaagtggct ttaacagcag taaagatcac gatgagcgca ttgccggtgc
     6301 tgtctccggc ggaaatgacc atatctccgg acgtctttcc gtggcatatc agaaatttgg
     6361 cggctggttt gacggtaacg gcgatgccac cctgcttgat aacacccaga ccggcctgca
     6421 gcactccaat cggctggaca tcatgggaac cggtacgctg aacatcgatg aatcccggca
     6481 gcttcaactg ataacgcagt actataaaag tcagggggac gacaattacg ggcttaatct
     6541 cgggaaaggc ttttccgcca tcagcgggag cagcacacca tacgtcagta aggggctgaa
     6601 ttctgaccgc attcccggca ctgagcggca tttgatcagc ctgcagtact ctgacagtga
     6661 tttcctgaga caggaactgg tcggtcaggt ttactaccgc gatgagtcgt tgcggttcta
     6721 cccgttcccg acggtaaatg cgaataaaca ggcgacggct ttctcctcgt cacagcagga
     6781 taccgaccag tacggcatga aactgactct gaacagccaa ctgatggacg gctggcaaat
     6841 cacctggggg ctggatgctg agcatgagcg ctttacctcc aaccagatgt tcttcgatct
     6901 ggctcaggca agtgcttccg gagggctgaa caaccataag atttacacca ccgggcgcta
     6961 tccgtcatat gacatcacca atctggcggc cttcctgcaa tccagctatg acattaatga
     7021 tatttttacc gtcagcggtg gcgtacgcta tcagtatact gagaacaggg tagatgattt
     7081 tatcgactac atgcagcaac agaagattgc tgccgggaag gcgatatctg ccgacgccat
     7141 tcctggtggt tcggtagatt acgataactt tctgttcaat gctggtctgc tgatgcacat
     7201 caccgaacgt cagcaggcat ggttcaattt ttcccagggg gtggcattgc cggatccggg
     7261 gaaatattat ggtcgcggca tctatggtgc agcagtgaac ggccatcttc ccctgacaaa
     7321 gagcgtgaac gtcagcgaca gtaagctgga aggcgtgaaa gtcgattctt atgaactggg
     7381 ctggcgcttt accggtgaca acctgcggac tcaaatcgca gcatattact cgctttccaa
     7441 taagagcgtg gaaaggaata aagatctgac catcagtgtg aaggacgaca ggcgccgtat
     7501 ttacggcgtg gaaggtgcgg tggactacct gatcccggat actgactgga gtaccggtgt
     7561 gaacttcaat gtgctgaaaa ccgagtcgaa agtgaacggt caatggcaaa aatatgacgt
     7621 gaaggaatca agtccatcga aagcgacagc ttacattagc tgggcgccgg aaccgtggag
     7681 tctgcgtgtg cagagcacca cttctttcga cgtaagcgat gcagagggta acgatattaa
     7741 tggttacact accgtcgatt ttatcagtag ttggctgctt ccggtgggaa cactcagctt
     7801 cagcgttgag aacctcttcg accgtgacta taccactgtc tggggacagc gtgcacctct
     7861 gtactacagc ccgggttacg gccctgcttc actgtacgac tacaaaggcc ggggccgaac
     7921 ctttggtctg aactactcag tgctgttctg acggggattc ttttgtaaca agggtatgct
     7981 gtaaacaaca tggtccttgg tggccatgtt gtttacagcc agtataatat acagccttaa
     8041 caagatattc cgtctccgga atggactgtt caccactgaa tgaaccgccc cgggtttcct
     8101 ggagagtgtt ttatctgtga actcaggctg ccagatcatt gtttccgatg gaagcataat
     8161 aagctttttc tgcttctgcc ggaggagtat ggcccagcct tcccagcaat cgtcgattgt
     8221 tataccagtc cacccacgtt agtgtggcca gttccacttc tgtccggttt ttccagctct
     8281 tacggtgtat tacctccgct ttgtaaagac cattgatgct ctccgccatc gcgttgtcat
     8341 acgagtcgcc agtactccct gttgatgcca gtaatccggc ttccttaagc cgctgcgtgt
     8401 aggccagcga tacatactga gaacctttat cactgtgatg gattgtgccg gacggccgac
     8461 gggcccacaa cgcctgctcc agtgcatcca gcacgaatgt tgtttccatg gatgatgaga
     8521 cctgccatcc cacgatgtat ccggcgaaca catcaatgat gaacgccaca taaacgaagc
     8581 cctgccatgt gcttacccag gtaaaatcag ccacccacaa ctggtctgga cgttctgcca
     8641 cgaactg
//
LOCUS       DAPGWB010000173         8629 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.175, whole genome shotgun sequence.
ACCESSION   DAPGWB010000173 DAPGWB010000000
VERSION     DAPGWB010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8629
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.175"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(258..521)
                     /gene="rpsT"
                     /locus_tag="RHX79_003970"
     CDS             complement(258..521)
                     /gene="rpsT"
                     /locus_tag="RHX79_003970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006117633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDV2199085.1"
                     /translation="MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK
                     AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA"
     gene            624..842
                     /locus_tag="RHX79_003971"
     CDS             624..842
                     /locus_tag="RHX79_003971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2575 family protein"
                     /protein_id="HDV2199086.1"
                     /translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGHFLPVICAMAMK
                     SHFFLISVLNRRLTLTAVQGILGRFSLF"
     gene            850..1791
                     /gene="ribF"
                     /locus_tag="RHX79_003972"
     CDS             850..1791
                     /gene="ribF"
                     /locus_tag="RHX79_003972"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDV2199087.1"
                     /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR
                     KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL
                     TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG
                     GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV
                     SPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL
                     RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA"
     gene            1834..4650
                     /gene="ileS"
                     /locus_tag="RHX79_003973"
     CDS             1834..4650
                     /gene="ileS"
                     /locus_tag="RHX79_003973"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDV2199088.1"
                     /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA
                     KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI
                     ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK
                     TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD
                     QDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD
                     LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT
                     APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA
                     LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQA
                     RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW
                     WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQH
                     RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI
                     LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV
                     VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA
                     DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL
                     ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELSAKLTALG
                     DELRFVLLTSGATVADYKDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV
                     AEHAEICGRCVSNVAGDGEKRKFA"
     gene            4650..5144
                     /gene="lspA"
                     /locus_tag="RHX79_003974"
     CDS             4650..5144
                     /gene="lspA"
                     /locus_tag="RHX79_003974"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HDV2199089.1"
                     /translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP
                     SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYA
                     LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSK
                     AKKQ"
     gene            5232..5681
                     /gene="fkpB"
                     /locus_tag="RHX79_003975"
     CDS             5232..5681
                     /gene="fkpB"
                     /locus_tag="RHX79_003975"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDV2199090.1"
                     /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL
                     SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT
                     AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA"
     gene            5683..6633
                     /gene="ispH"
                     /locus_tag="RHX79_003976"
                     /gene_synonym="lytB"
     CDS             5683..6633
                     /gene="ispH"
                     /locus_tag="RHX79_003976"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDV2199091.1"
                     /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY
                     VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV
                     HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK
                     LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL
                     VVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ
                     NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD"
     gene            6699..7613
                     /gene="rihC"
                     /locus_tag="RHX79_003977"
     CDS             6699..7613
                     /gene="rihC"
                     /locus_tag="RHX79_003977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside hydrolase RihC"
                     /protein_id="HDV2199092.1"
                     /translation="MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK
                     TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP
                     AFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTP
                     NAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLSTLPQLNRTGKMLHALF
                     SHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLG
                     KPANVQVALDLDVKGFQQWVAEVLALAS"
     gene            7780..8601
                     /gene="dapB"
                     /locus_tag="RHX79_003978"
     CDS             7780..8601
                     /gene="dapB"
                     /locus_tag="RHX79_003978"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDV2199093.1"
                     /translation="MHDVNIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL
                     LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPQGTLNHLAFCRQHGKGMVIG
                     TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
                     RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVG
                     EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNSL"
BASE COUNT         1958 a         2159 c         2461 g         2051 t
ORIGIN      
        1 atgtgtatca caatatccac attctttgta gggggtctgg agattgagta gatattcttg
       61 ttcagaatgt atcagccgat ggttctacga ttcttaagcc acgaagagtt cagatagtac
      121 aacggcatgt ctgcaagaac ctgcaacttt tgactatctg gcaaccggca gtgtgttctc
      181 tcacgcatca caaaagcagc aggcataaaa aaacccgctt gcgcgggctt tttcacaaag
      241 cttcagcaaa ttggcgatta agccagtttg ttgatctgtg cagtcaggtt agccttatga
      301 cgtgcagctt tgtttttgtg gatcagacct ttagcagcct gacggtccac gatcggttgc
      361 atttcgttaa atgctttctg tgcagcagct ttgtcgccag cttcgatagc tgcgtatact
      421 ttcttgatga aagtacgcat catagagcga cggcttgcgt tgtgcttacg agccttttca
      481 gactgaatgg cgcgcttctt agctgatttg atattagcca aggtccaact cccaaatgtg
      541 ttctatatgg acaattcaaa ggccgaggaa tatgcccttt tagccttctt ttgtcaatgg
      601 atttgtgcaa ataagcgccg ttaatgtgcc ggcactcgtt acgtagtgat ggcgcaggat
      661 tctaccagct tgcggggtgt gaatacagct tttccgcgat aaaaattgca gcaggcggtc
      721 actttcttcc cgtgatttgc gccatggcaa tgaaaagcca cttctttctg atttcggtac
      781 tcaatcgccg gttaaccttg accgctgtac aaggtatact cggacgattt tcactgtttt
      841 gagccagaca tgaagctgat acgcggcata cataatctca gccaggcccc gcaagaaggg
      901 tgtgtgctga ctattggtaa tttcgacggc gtgcatcgcg gtcatcgcgc gctgttacag
      961 ggcttgcagg aagaagggcg caagcgcaac ttaccggtga tggtgatgct ttttgaacct
     1021 caaccactgg aactgtttgc taccgataaa gccccggcac ggctgacccg gctgcgggaa
     1081 aaactgcgtt accttgcaga gtgtggcgtt gattacgtgc tgtgcgtgcg tttcgacagg
     1141 cgtttcgcgg cgttaaccgc gcaaaatttc atcagcgatc ttctggtgaa gcatttgcgc
     1201 gtaaaatttc ttgccgtagg tgatgatttc cgctttggcg ctggtcgtga aggcgatttc
     1261 ttgttattac agaaagctgg catggaatac ggcttcgata tcaccagtac gcaaactttt
     1321 tgcgaaggtg gcgtgcgtat cagcagcacc gctgtgcgtc aggcgctggc ggatgacaat
     1381 ctggctctgg cagaaagttt actggggcac ccgtttgcca tctccgggcg tgtagtccac
     1441 ggtgatgaat tagggcgcac tataggtttc ccgacggcga atgtaccgct acgccgtcag
     1501 gtttccccgg tgaaaggggt ttatgcggta gaagtgctgg gcctcggtga aaagccgtta
     1561 cccggcgtgg caaacattgg aacacgccca acggttgccg gtattcgcca gcagctggaa
     1621 gtgcatttgt tagatgttgc aatggacctt tacggtcgcc atatacaagt agtgctgcgt
     1681 aaaaaaatac gcaatgagca gcgatttgcg tcgctggacg aactgaaagc gcagattgcg
     1741 cgtgatgaat taaccgcccg cgaatttttt gggctaacaa aaccggctta agcctgttat
     1801 gtaatcaaac cgaaacacgg aaccgagaat ctgatgagtg actataaatc aaccctgaat
     1861 ttgccggaaa cagggttccc gatgcgtggc gatctcgcca agcgcgaacc gggaatgctg
     1921 gcgcgttgga ctgatgatga tctgtacggc atcatccgtg cggctaaaaa aggcaaaaaa
     1981 accttcattc tgcatgatgg ccctccttat gcgaatggca gcattcatat tggtcactcg
     2041 gttaacaaga ttctgaaaga cattatcgtg aagtccaaag ggctttccgg ttatgactcg
     2101 ccgtatgtgc ctggctggga ctgccacggt ctgccgatcg agctgaaagt agagcaagaa
     2161 tacggtaagc cgggtgagaa attcaccgcc gccgagttcc gcgccaagtg ccgcgaatac
     2221 gcggcgaccc aggttgacgg tcaacgcaaa gactttatcc gtctgggcgt gctgggcgac
     2281 tggtcgcacc cgtacctgac catggacttc aaaactgaag ccaacatcat ccgcgcgctg
     2341 ggcaaaatca tcggcaacgg tcacctgcac aaaggcgcga agccagttca ctggtgcgtt
     2401 gactgccgtt ctgcgctggc ggaagcggaa gttgagtatt acgacaaaac ttctccgtcc
     2461 atcgacgttg cttttcaggc ggtcgatcag gatgcactga aagcaaaatt tgccgtaagc
     2521 aacgttaacg gcccaatctc gctggtgatc tggaccacta cgccgtggac tctgcctgcg
     2581 aaccgcgcaa tctctattgc acctgatttc gactatgcgc tggtgcagat cgacggtcag
     2641 gccgtgattc tggcgaaaga tctggttgaa agcgtaatgc agcgtatcgg cgtgaccgat
     2701 tacaccattc tcggcacggt aaaaggtgcg gagcttgagt tgctgcgctt tacccatccg
     2761 tttatgggct tcgacgttcc ggcaatcctc ggcgatcacg ttaccctgga tgccggtacc
     2821 ggtgccgttc acaccgcgcc tggccacggc ccggacgact atgtgatcgg tcagaaatac
     2881 ggcctggaaa ccgctaaccc ggttggcccg gacggcactt atctgccggg cacttatccg
     2941 acgctggatg gcgtgaacgt cttcaaagcg aacgacatcg tcgttgcgct gctgcaggaa
     3001 aaaggcgcgc tgctgcacgt tgagaaaatg cagcacagct atccgtgctg ctggcgtcac
     3061 aaaacgccga tcatcttccg cgcgacgccg cagtggttcg tcagcatgga tcagaaaggt
     3121 ctgcgtgcgc agtcactgaa agagatcaaa ggcgtgcagt ggatcccgga ctggggccag
     3181 gcgcgtatcg agtcgatggt tgctaaccgt cctgactggt gtatctcccg tcagcgcacc
     3241 tggggcgtac cgatgtcact gttcgtgcac aaagacacgg aagagctgca tccgcgtact
     3301 ctcgaactaa tggaagaagt ggcaaaacgc gttgaagttg acggcatcca ggcgtggtgg
     3361 gatcttgatg cgaaagagat cctcggcgat gaagctgatc agtacgtgaa agtgccggac
     3421 acattggatg tatggtttga ctccggatct acccactctt ctgttgttga cgtgcgtccg
     3481 gaatttgccg gtcacgcagc ggacatgtat ctggaaggtt ctgaccagca ccgtggttgg
     3541 ttcatgtctt ccctaatgat ctccaccgcg atgaaaggca aagcgccgta tcgtcaggta
     3601 ctgacccacg gctttaccgt ggatggtcag ggtcgcaaga tgtctaaatc catcggcaat
     3661 accgtttcgc cgcaggatgt gatgaacaaa ctgggcgcgg atattctgcg tctgtgggtg
     3721 gcatcaaccg actacaccgg tgaaatggcc gtttctgacg agatcctgaa acgtgctgcc
     3781 gatagctatc gtcgtatccg taacaccgcg cgcttcctgc tggcaaacct gaacggtttt
     3841 gatccagcaa aagatatggt gaaaccggaa gagatggtgg tactggatcg ctgggccgta
     3901 ggttgtgcga aagcggcaca ggaagacatc ctcaaggcgt acgaagcata cgatttccac
     3961 gaagtggtac agcgtctgat gcgcttctgc tccgttgaga tgggttcctt ctacctcgac
     4021 atcatcaaag accgtcagta caccgccaaa gcggacagtg tggcgcgtcg tagctgccag
     4081 actgcgctgt atcacatcgc agaagcgctg gtgcgctgga tggcaccaat cctctccttc
     4141 accgctgatg aagtgtgggg ctacctgccg ggcgaacgtg aaaaatacgt cttcaccggt
     4201 gagtggtacg aaggcctgtt tggcctggca gacagtgaag cgatgaacga tgcgttctgg
     4261 gacgagctgt tgaaagtgcg tggcgaagtg aacaaagtca ttgagcaagc gcgtgccgac
     4321 aagaaagtgg gtggctcgct ggaagcggca gtaaccttgt atgcagaacc ggaactgtcg
     4381 gcgaaactga ccgcgctggg cgatgaatta cgatttgtcc tgttgacctc cggcgctacc
     4441 gttgcagact ataaagacgc acctgctgat gctcagcaga gcgaagtact caaagggctg
     4501 aaagtcgcgt tgagtaaagc cgaaggtgag aagtgcccac gctgctggca ctacacccag
     4561 gatgtcggca aggtggcgga acacgcagaa atctgcggcc gctgtgtcag caacgtcgcc
     4621 ggtgacggtg aaaaacgtaa gtttgcctga tgagtcaatc gatctgttca acagggctac
     4681 gctggctgtg gctggtggta gtcgtgctga ttatcgatct gggcagcaaa tacctgatcc
     4741 tccagaactt tgctctgggg gatacggtcc cgctgttccc gtcgcttaat ctgcattatg
     4801 cgcgtaacta tggcgcggcg tttagtttcc ttgccgatag cggcggctgg cagcgttggt
     4861 tctttgccgg tattgcgatt ggtattagcg tgatcctggc agtgatgatg tatcgctcga
     4921 aggccacgca gaagctaaac aatatcgctt atgcgctgat tattggcggc gcgctgggca
     4981 acctgttcga ccgcctgtgg cacggcttcg ttgtcgatat gatcgacttc tacgtcggcg
     5041 actggcactt cgccaccttc aaccttgccg atactgccat ttgtgtcggt gcggcactga
     5101 ttgtgctgga aggttttttg ccttctaaag cgaaaaaaca ataataaacc ctgccggata
     5161 aggcctacag attgctgcga aatcgtaggc cgcatccggc aaaaatcctc aaaatataag
     5221 agcaaacctg catgtctgaa tctgtacaga gcaatagcgc cgtcctggtg cacttcacgc
     5281 taaaactcga cgatggcacc accgccgagt ctacccgcaa caacggtaaa ccggcgctgt
     5341 tccgcctggg tgatgcttct ctttctgaag ggctggagca acacctgttg gggctgaaag
     5401 tgggcgataa aaccaccttc tcgttggagc cagatgcggc gtttggcgtg ccgtcaccgg
     5461 acctgattca gtacttctcc cgccgtgaat ttatggatgc aggcgagcca gaaattggcg
     5521 caatcatgct ttttaccgca atggatggca gtgagatgcc tggcgtgatc cgcgaaatta
     5581 acggcgactc cattaccgtt gatttcaacc atccgctggc cgggcagacc gttcattttg
     5641 atattgaagt gctggaaatc gatccggcac tggaggcgta acatgcagat cctgttggcc
     5701 aacccgcgtg gtttttgtgc cggggtagac cgcgctatca gcattgttga aaacgcgctg
     5761 gccatttacg gcgcaccgat atatgtccgt cacgaagtgg tacataaccg ctatgtggtc
     5821 gatagcttgc gtgagcgtgg ggctatcttt attgagcaga ttagcgaagt accggacggc
     5881 gcgatcctga ttttctccgc acacggtgtt tctcaggcgg tacgtaacga agcaaaaagt
     5941 cgcgatttga cggtatttga cgcgacctgt ccgctggtga ccaaagtgca tatggaagtc
     6001 gcccgcgcca gtcgccgtgg cgaagaatct attctcatcg gtcacgccgg gcacccggaa
     6061 gtggaaggga caatgggcca gtacagtaac ccggaagggg gaatgtatct ggtcgaatcg
     6121 ccggacgatg tgtggaaact gacggtcaaa aacgaagaga agctctcctt tatgacccag
     6181 accacgctgt cggtggatga cacgtctgat gtgatcgacg cgctgcgtaa acgcttcccg
     6241 aaaattgtcg gtccgcgcaa agatgacatc tgctacgcca cgactaaccg tcaggaagcg
     6301 gtacgcgccc tggcagaaca ggcggaagtt gtgttggtgg tcggttcgaa aaactcctcc
     6361 aactccaacc gtctggcgga gctggcccag cgtatgggca aacgcgcgtt tttgattgac
     6421 gatgcgaaag acatccagga agagtgggtg aaagaggtta aatgcgtcgg cgtgactgcg
     6481 ggcgcatcgg ctccggatat tctggtgcag aatgtggtgg cacgtttgca gcagctgggc
     6541 ggtggtgaag ccattccgct ggaaggccgt gaagaaaaca ttgttttcga agtgccgaaa
     6601 gagctgcgtg tcgatattcg tgaagtcgat taagtcatta gcagcctaag ttatgcgaaa
     6661 atgccggtct tgttaccggc attttttatg gagaaaacat gcgtttacct atcttcctcg
     6721 atactgaccc cggcattgac gatgccgtcg ccattgccgc cgcgattttt gcccccgaac
     6781 tcgacctgca actgatgacc accgtcgcgg gtaatgtctc ggttgagaaa actacccgta
     6841 atgccttgca actgctgcat ttctggaatg cggagattcc gctcgcccaa ggggccgctg
     6901 tgccgctggt acgcgcaccg cgtgatgcgg catctgtgca cggcgaatcg ggaatggctg
     6961 gctacgactt tgttgagcac aaccgaaagc cgctcgggat accggcgttt ctggcgattc
     7021 gggatgccct gatgcgtgca ccagagcctg ttaccctggt ggccatcggc ccgttaacca
     7081 atattgcgct gttactttca caatgcccgg aatgcaagcc gtatattcgc cgtctggtga
     7141 tcatgggtgg ttctgccgga cgcggcaact gtacgccaaa cgccgagttt aatattgctg
     7201 ccgatccaga agctgctgcc tgtgtcttcc gcagtggtat tgaaatcgtc atgtgcggtc
     7261 tggatgtcac caatcaggca atattaactc ctgactatct ctctacactg ccgcagttaa
     7321 accgtaccgg gaaaatgctt cacgccctgt ttagccacta ccgtagcggc agtatgcaaa
     7381 gcggcttgcg aatgcacgat ctctgcgcca tcgcctggct ggtgcgcccg gacctgttca
     7441 ctctcaaacc ctgttttgtg gcagtggaaa ctcagggcga atttacctca ggcacgacgg
     7501 tggttgatat cgacggttgc ctgggcaagc cagccaatgt acaggtggca ttggatctgg
     7561 atgtgaaagg cttccagcag tgggtggctg aggtgctggc tctggcgtcg taacctgtca
     7621 catgttattg gcatgcagtc attcatcgac tcatgccttt cactgatatc cctccctgtt
     7681 tatcattaat ttctaattat cagcgttttt ggctggcggc gtagcgatgc gctggttact
     7741 ctgaaaacgg tctatgcaaa ttaacaaaag agaatagcta tgcatgatgt aaacatccgc
     7801 gttgccatcg cgggagccgg ggggcgtatg ggccgccagt tgattcaggc ggcgctggca
     7861 ttagaaggcg tgcagctggg cgcggcgctg gagcgcgaag gatcttcttt actgggcagc
     7921 gacgccggtg agctggctgg tgcagggaaa acaggcgtta ccgtgcaaag cagcctcgat
     7981 gcggtaaaag atgattttga tgtgtttatc gattttaccc gtccgcaagg tacgctgaac
     8041 catctcgctt tttgtcgcca gcatggcaaa gggatggtga tcggcactac ggggtttgac
     8101 gaagccggta aacaggcgat tcgtgacgcc gccgccgata ttgcgattgt ctttgccgcc
     8161 aattttagcg ttggcgttaa cgtcatgctt aagctgctgg agaaagcagc caaagtgatg
     8221 ggtgactaca ccgatatcga aattattgaa gcacatcata gacataaagt tgatgcgccg
     8281 tcaggcaccg cactggcaat gggagaggcg atcgcccacg cccttgataa agatctgaaa
     8341 gattgcgcgg tctacagtcg tgaaggccac accggtgaac gtgtgcctgg caccattggt
     8401 tttgccaccg tgcgtgcagg tgacatcgtt ggcgaacata ccgcgatgtt tgccgatatt
     8461 ggcgagcgtc tggagatcac ccataaggcg tccagccgca tgacatttgc taacggcgcg
     8521 gtaagatcgg ctttgtggtt gagtggtaag gaaagtggtc tttttgatat gcgagatgtg
     8581 cttgatctca atagtttgta accacaaaat atttgttatg gtgcaaaaa
//
LOCUS       DAPGWB010000174         8572 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.176, whole genome shotgun sequence.
ACCESSION   DAPGWB010000174 DAPGWB010000000
VERSION     DAPGWB010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8572
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.176"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(302..1045)
                     /gene="traF"
                     /locus_tag="RHX79_003979"
     CDS             complement(302..1045)
                     /gene="traF"
                     /locus_tag="RHX79_003979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly protein TraF"
                     /protein_id="HDV2199094.1"
                     /translation="MNKALLPLLLCCFIFPASGKDAGWQWYNEKINPKEKENKPVPAA
                     PRQEPDIMQKLAALQTATKRALYEAILYPGVDNFVKYFRLQNYWTQQAGLFTMSAKKA
                     MLAHPELDYNLQYSHYNGTVRNQLAADQAQQRQAIAKLAEHYGIMFFYRGQDPIDGQL
                     AQVINGFRDTYGLSVIPVSVDGVINPLLPDSRTDQGQAQRLGVKYFPAMMLVDPKQGS
                     VRPLSYGFISQDDLAKQFLNVSEDFKPNF"
     gene            complement(1038..1295)
                     /gene="trbE"
                     /locus_tag="RHX79_003980"
     CDS             complement(1038..1295)
                     /gene="trbE"
                     /locus_tag="RHX79_003980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000864342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbE"
                     /protein_id="HDV2199095.1"
                     /translation="MKVIFTSNRLVDFLIRLSITAIVISPVIIWSWDTVKETTADGML
                     AAAFVILYSGVLLFILYFCFSALTGLQKDDERKNDERNEDE"
     gene            complement(1322..3172)
                     /gene="traN"
                     /locus_tag="RHX79_003981"
     CDS             complement(1322..3172)
                     /gene="traN"
                     /locus_tag="RHX79_003981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system mating-pair
                     stabilization protein TraN"
                     /protein_id="HDV2199096.1"
                     /translation="MKRILPLILALVAGMAQADSNSDYRAGSDFARQIQGQGTGSIQG
                     FKPQESIPSYNANPDETKYYGGVTAGGDGGLKNDGTTEWATGETGKTITESFMNKPKD
                     ILSPDAPFIQTGRDVVNRADSIVGNTGQQCSAQEINRSEFTNYTCERDTMVEEYCTRT
                     ASITGDWKYTDEYREVTIPHSQFRFSMNGLKLVFSVTAPVTGTVESASLSVYAAFFFL
                     NSRYTFMNTTFNVGLANGQSDTYPLSGATGLQVTQGQVLTGSGCTANGNCLPHGNGDR
                     KVYESLVSGASTFTLKLRMKVRDKEWVPRVEWVESCPFNKADGVLTGTECSEPGGTKT
                     GVMEGKPWNITQACWAYRDKYVTQSADNGTCQKYVDNPACTLASRQCAFYSDEGTCLH
                     EYATYSCESRTSGKVMVCGGDVFCLDGECDKAQSGKSSDFGEAVSQLAALAAAGKDVA
                     ALNGVDVRAFTGEAKFCRKAAAGFSNCCKDGGWGQDVGLAKCNSEEKALGKAKDNKLT
                     VSVGEFCSKKVLGVCLQKKRSYCQFDSKLAQIVQQQGRNGQLRIGFGSAKHPDCRGIT
                     VDELQKIQFDRLDFTNFYEDLMNNQKIPDSGVLTQKVKEQIADQLKQAGQ"
     gene            complement(3169..3807)
                     /gene="trbC"
                     /locus_tag="RHX79_003982"
     CDS             complement(3169..3807)
                     /gene="trbC"
                     /locus_tag="RHX79_003982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001733892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly protein TrbC"
                     /protein_id="HDV2199097.1"
                     /translation="MNRKIFALFALTAGMHLAVHASENVNTTENRQFLKQQENLSRQL
                     REKPDHQLKAWAEKQVLENPLQRSDNHFLDELVRKQQASQDGKPRQGALYFVSFSIPE
                     EGLKRMLGETRHYGIPATLRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGI
                     RSVPALVVFCSQGYDIIRGNLRVGQALEKVAATGDCRQVAHDLLAGKGDSGK"
     gene            complement(3816..4121)
                     /locus_tag="RHX79_003983"
     CDS             complement(3816..4121)
                     /locus_tag="RHX79_003983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001505125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199098.1"
                     /translation="MATMDSKYIQHLRKISAVLLRLISRTLKLFPFGLVIVPVILFYF
                     APDSFLAEIIHEWKNADISEQVTLVRLYLKVTFTCAFVAVFLNYLFSDEFMPVNSRK"
     gene            complement(4151..5143)
                     /locus_tag="RHX79_003984"
     CDS             complement(4151..5143)
                     /locus_tag="RHX79_003984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer pilus assembly protein TraU"
                     /protein_id="HDV2199099.1"
                     /translation="MKRSLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFP
                     LSLGSIKVSQGKVPDTANPSMPIQICPAPPPLFRRIGLAIGYWEPMALTDVTRSPGCM
                     VNLGFSLPAFGKTAQGTAKKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLD
                     IAYLSEIDPTWTDSSLTTILNPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGS
                     QGSMYPFNGWVSNESSPLQSSLLVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILP
                     KERWRYQMVNMYPDSGQCHPFGRSVMRWETGKNPPNTKKNFGYLMWRKRNCVFL"
     gene            complement(5140..5772)
                     /gene="traW"
                     /locus_tag="RHX79_003985"
     CDS             complement(5140..5772)
                     /gene="traW"
                     /locus_tag="RHX79_003985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system protein TraW"
                     /protein_id="HDV2199100.1"
                     /translation="MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLT
                     ALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKYSSRLFDPSVRLAADIRDNEG
                     RVFARQGEVMNPLQYVPFNQTLYIINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEM
                     QKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEFIPAEEGRK"
     gene            complement(5769..6155)
                     /gene="trbI"
                     /locus_tag="RHX79_003986"
     CDS             complement(5769..6155)
                     /gene="trbI"
                     /locus_tag="RHX79_003986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system protein TrbI"
                     /protein_id="HDV2199101.1"
                     /translation="MTTTQKTTDVTAPRRSHWWWTVPGCLAMVLLNAAVSYGIVRLNA
                     PVTAAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVS
                     PAVVQGAPDITREIQQDIARRMRAEP"
     gene            complement(6152..>8572)
                     /gene="traC"
                     /locus_tag="RHX79_003987"
     CDS             complement(6152..>8572)
                     /gene="traC"
                     /locus_tag="RHX79_003987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000069745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein TraC"
                     /protein_id="HDV2199102.1"
                     /translation="PINGANKSIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYG
                     LREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKK
                     SRADILEMENLVKIIRASLQGASIATQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDP
                     YSDLNYQCVEDSFDLNVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNY
                     SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEA
                     KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRF
                     NHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY
                     RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY
                     KSLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLL
                     QAVRASWLAKENRARIDDVVDFLKNASDSEQYAGSPTIRSRLDEMIVLLDQYTANGTY
                     GQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN
                     VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWG
                     NSSYKIILRQSAKEFAKYNQLYPDQFQPLQRDMIGKFGAAKDQWFSSFLLQVENHSSW
                     HRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLEE
                     HEKYRSVA"
BASE COUNT         1971 a         2455 c         2067 g         2079 t
ORIGIN      
        1 caacataata caaacaaaca tccttctgaa actgtcaaac ttcgtgataa ccggtatggt
       61 actgactgcc attgaaacaa ccggtacggc acactgattc ataaccgcac cacaaagaaa
      121 caagaaatta tctggcagca tacatacact tatgacattt actacaaaga agacaaacga
      181 gctcagcaga taaactcctt tattatttgg tcctgtaaag aaataaccaa caacccccac
      241 gataaacagg ctggcacctg taaaaaaaca caaatcccct gtatgcatat ataacctttg
      301 gttaaaaatt cggtttaaaa tcttcagaaa cgttcaggaa ctgttttgcc aggtcgtcct
      361 gtgaaataaa gccgtatgat aacgggcgaa cactgccctg tttcgggtca accagcatca
      421 tggccgggaa atatttcaca ccgaggcgct gcgcctgccc ctggtcagtc cgggaatccg
      481 gcaacagcgg attaatcacg ccatccacgg aaacgggaat aacactcaga ccataggtat
      541 ccctgaagcc attaatgacc tgcgccagtt gcccgtcgat ggggtcctgc ccccggtaaa
      601 agaacatgat gccgtagtgt tcagccagtt tcgcaatggc ctgtcgctgc tgcgcctggt
      661 ctgccgccag ctggttccgt accgtgccgt tgtaatggct gtactgcagg ttatagtcca
      721 gttcgggatg tgccagcatg gcctttttag cactcatggt gaaaagcccg gcctgctgag
      781 tccagtaatt ctgcagccgg aaatatttaa caaaattatc cacgccggga tacagaatgg
      841 cttcgtacag cgcccgcttt gttgccgtct gcagcgcggc cagtttctgc ataatatccg
      901 gctcctgacg gggggctgca ggtacaggtt tattttcttt ttccttcgga tttattttct
      961 cgttatacca ctgccagcct gcatctttcc ctgacgccgg aaaaataaag cagcagagta
     1021 acagtggcag taatgcttta ttcatcttca ttcctttcat cattttttct ttcatcatct
     1081 ttctgcaggc cagtcagggc agaaaaacaa aaatacagaa taaacaggag cacaccggag
     1141 taaaggataa cgaaagcagc ggcaagcatc ccgtctgccg tggtttcttt taccgtatcc
     1201 cacgaccaga taattaccgg ggaaatgaca atcgctgtaa tcgaaagccg gataagaaaa
     1261 tcaacaagac gattagaagt gaatataact ttcatcattt cccccggtta ttttccatac
     1321 cttactgtcc tgcctgtttc agctggtcag caatctgctc tttcactttc tgcgtcagaa
     1381 cgccactgtc cgggattttc tggttattca tcaggtcttc gtagaagtta gtgaaatcca
     1441 gtctgtcgaa ctgaattttc tgcagctcat caaccgtaat cccccgacag tcaggatgct
     1501 tcgcactgcc aaacccgata cgcaactgcc cgttacgccc ctgctgctgg actatctgcg
     1561 ccagcttcga atcaaactgg cagtagctgc gctttttctg cagacagaca cccagcactt
     1621 tcttcgaaca gaactctccg acactgacgg tcagtttgtt gtcctttgcc tttcccagcg
     1681 ccttttcttc gctgttgcac ttcgccagac ccacatcctg accccagcca ccatccttac
     1741 agcagttact gaagccggct gcggccttac ggcagaattt cgcctcaccc gtgaaagccc
     1801 tgacatccac accattcagg gcggcaacat ccttacctgc ggcggcaagc gcagccagct
     1861 gtgatactgc ttcaccaaaa tcactgcttt ttccgctctg tgccttatcg cattcaccgt
     1921 caaggcagaa gacatcacca ccacagacca tcacttttcc tgatgttctg gactcgcagg
     1981 agtacgtggc gtactcatgc agacaggttc cctcatcgga ataaaacgcg cactgacgtg
     2041 aggccagcgt acaggccgga ttatcgacat atttctgaca ggtgccgtta tctgcggact
     2101 gagtgacata tttatcccgg tatgcccagc atgcctgtgt gatgttccag ggtttacctt
     2161 ccatcactcc ggttttcgta ccacccggct ctgaacactc agtgcctgtc agcacgccat
     2221 ccgctttatt aaacggacaa ctctccaccc actccacccg gggaacccat tctttatcac
     2281 ggaccttcat cctgagtttc agcgtaaagg tggaagcacc actgacaagc gattcataga
     2341 ctttcctgtc accattcccg tgcgggaggc aattaccgtt agcagtacag ccactaccgg
     2401 tcagaacctg cccctgtgtc acctgcaaac ctgtcgcccc ggacaggggg taagtatccg
     2461 actgcccgtt tgccaggccg acattaaagg ttgtattcat gaaggtataa cgggagttca
     2521 ggaagaaaaa agcggcgtat acagacaatg atgcactttc cactgtaccg gttaccggag
     2581 ccgtgacact gaacaccagt ttcagcccgt tcatactgaa ccggaactgt gagtgcggta
     2641 tcgtcacttc acgatattca tccgtgtatt tccagtcccc ggtgatactg gcagtccgtg
     2701 tgcagtactc ctccaccatc gtgtcccgct cacaggtata gtttgtgaat tcactgcggt
     2761 ttatctcctg cgcactgcac tgctgtccgg tatttcccac aatgctgtca gcccggttca
     2821 ccacatccct gccggtctga atgaacggtg catccggtga cagaatgtct ttcggcttgt
     2881 tcatgaagga ctctgtgatg gtttttccgg tttcaccggt cgcccattcc gtggtgccgt
     2941 catttttcag gccgccatcc ccgccggcag tcacgccacc gtaatatttt gtctcgtccg
     3001 gattcgcgtt atagctgggg atactctcct gtggcttaaa gccctgaata ctgcctgtac
     3061 cctgcccctg aatctgacgg gcaaaatcag aaccggcccg gtaatcactg ttgctgtcag
     3121 cctgtgccat gccggcaacc agagccagta tcagaggtaa aatacgtttc atttcccgga
     3181 atctcctttc cctgccagta aatcatgagc cacctgccgg cagtcacccg tggcggccac
     3241 tttctccagc gcctggccga cccgcaggtt tccccggatg atgtcgtatc cctgactgca
     3301 gaacaccacc agtgccggta cactgcgaat gccgtactgt gaaaacagcg tcgggtcgat
     3361 ctgaacacca tcagtcgcgc cgtctttcac cagggacagc acggcttcag cggtggtctt
     3421 caggtcattg ttcaccatgc cccgcagtgt ggcgggtata ccgtagtgcc gggtttcgcc
     3481 cagcatccgt ttcagcccct cttcgggaat ggaaaacgac acaaaataca gggcaccctg
     3541 ccggggtttc ccgtcctgcg aagcctgctg tttacgaacc agctcatcca gaaaatggtt
     3601 atctgaacgc tgaagggggt tttccagcac ctgtttctcc gcccaggctt tcagctgatg
     3661 gtcaggtttc tctcgcagtt gtctgcttaa attttcctgc tgcttcagga actggcggtt
     3721 ttcagttgtg ttcacatttt ctgaagcatg aacagcaaga tgcatccctg ctgtcagagc
     3781 aaaaagtgca aatattttcc ggttcatgat atttctcact ttctgctatt tacaggcatg
     3841 aactcatcag aaaaaagata attgagaaaa acagccacaa acgcacatgt aaatgtcacc
     3901 ttcagatata atctgacaag tgtcacttgt tctgatatat ctgcgttctt ccattcatga
     3961 ataatttcag cgagaaaact gtcaggtgca aaataaaata atataacggg cactattaca
     4021 agaccaaaag gaaataattt taatgttctg cttatcagcc tgagcagtac agcacttatt
     4081 ttcctgaggt gctgaatata tttactgtcc attgttgcca ttttcatttc ctcttattca
     4141 ttaaaatgat ttacaggaat acacagttac gtttacgcca catcaggtag ccgaagtttt
     4201 tctttgtgtt gggcggattt tttcccgtct cccagcgcat cacactgcgc ccgaacggat
     4261 ggcactgtcc gctgtccgga tacatattca ccatctgata acgccagcgt tctttaggca
     4321 ggattgggga cggatattca ttacagacgg cgttattttt cccgatggtt tccataatca
     4381 tgccctgacg gtgtagtttg aacgccatgc gttcactgac cagcagggag gactgcaacg
     4441 gactggactc attactcacc cagccattga acgggtacat actgccctgc gaaccggcac
     4501 accagaacag aacatcgaga ggcatattaa aggcgctggc aatggcatct gctgcacagg
     4561 ccccctgtgc tatcggattg gcaaagatga cagcttccgg attgagaatg gtggtcaggc
     4621 tgctgtccgt ccaggtgggg tcaatttcag aaagataagc gatatccagg tcaccacctt
     4681 ccagacagcc cagcgatgtg atgatgttaa gccagtacgt cagcgggtat ttgtaccagt
     4741 gaacgtgata gaacgccccg ttcacctgct tctcatcctt tttcgccgtt ccctgtgccg
     4801 ttttaccaaa agccggcagg ctgaagccca ggttcaccat gcatcccggt gaccgggtga
     4861 cgtccgtcag cgccatcggc tcccagtaac caatggccag cccgatacgc ctgaacagcg
     4921 gcggcggtgc cggacaaatc tgaatgggca tcgacgggtt cgccgtgtcg gggaccttac
     4981 cctgactgac tttgatactg cccagcgaga gcgggaaaat acagctccag cagatatccg
     5041 tgatcgggtt tacaaaacgc ccctcacagg cagaatccgc agatgccgca gggacatgac
     5101 cggcgagaag gaataacatc agcagccaca ggcttcgctt cattttctgc cctcctctgc
     5161 cggaataaat tccaccttca ggaagcgatc gccgggaacg gcgctcaccc gtgccgggac
     5221 ctgatcaatg ccgaggcgct ggcagagcac accgttctgg tcaaagtaaa cacggctgtc
     5281 cagagacttc tgcatctccg ggatactgcc ctgcacgagg ataattttgc tctccagtgt
     5341 gggcggcgtc tggcgtttca tccaggccac ctgcgccgga tcatcgccat tgatgatata
     5401 cagcgtctgg ttaaaaggca catactgcag cggattcatc acttcaccct gacgggcaaa
     5461 cacccgccct tcgttatccc ggatatccgc agccagtctg acggacgggt caaacaaccg
     5521 gctgctgtat ttctccgtgc gtccgatacc gggcacggca gggggccgca gactgttgcg
     5581 gatcacccgc tccttaaagg catccatttt ccggcccatc tcaccggact gctccagtgc
     5641 cgtcaggcgc tgcatgatca ccgtcagcat gtccggctcc tttaccggcc acagatcgcc
     5701 ccaggtgcca agatcggcgg cggccacact ctgcccccat atcagcaggg caatcagccc
     5761 ccggcatctc atggttccgc tctcattcgc cgggcaatat cctgctggat ttcccgggtg
     5821 atatccggag ccccctgtac cacggcaggc gacaccagaa tgaccgcgtg gtgtttctgc
     5881 tgccacgcct gcaggctggc ttccagtgcc gtgttaaaac gcgctgaaag ggcttttgac
     5941 tgtgcttctg acagttgttt ctgactggcg ctgtcaaaaa atgcatccac agtctgtttc
     6001 atgttgaagg cggcagtcac cggtgcgttc agtctgacaa tgccgtaact gacggctgcg
     6061 ttcagtaaca ccattgccag gcatcccggc accgtccacc accagtggct gcgtcggggg
     6121 gctgtaacat cagtcgtttt ttgcgttgtg gtcatgcaac actcctgtat ttctcatgtt
     6181 cttccagcca ggcttccagc gaagccatct ccggccctga cttcttccac gccagctgcc
     6241 acaccgcctc atgaatactc agcccctctt tacgtttctg ctgcacaaac tcaaaatccg
     6301 ggccgtcaga gctgtacatg gcgcggctta acgggtccac aaacaggcgg tgccaggagg
     6361 aatggttttc cacctgcagc aggaaggaac tgaaccactg gtctttggcc gcaccaaact
     6421 taccaatcat gtcgcgctgc agtggctgga actggtccgg atacagctgg ttgtatttcg
     6481 cgaactcctt cgcactctgt ctgaggataa ttttgtagga ggagttaccc catgccgcgc
     6541 gggcagcact ggaggccttg tcagagtcaa agtcgacgat gttctgtgtg atggtgatat
     6601 aggcaccggt atgacggcgg gccgtacggt agcctttctc aataaattca ccgaccttgt
     6661 gatttttgaa gtccagcaga cgccagcctt catcaataac gttcagtttc ttgaggttac
     6721 gcggcgtgcg gtacatcctg ttctcgatgt agataatcag ggagaacatc accgcaacca
     6781 gcagtgacgg acggtcttcc agtccgccca gctccagcac caccattttt gcgtcatccc
     6841 gcagggacgg ctcatcggag ttaaaatact ggccgtaagt gccgttggca gtgtactggt
     6901 caagcagcac aatcatttcg tccagacggc tgcggatggt cggtgacccg gcatactgct
     6961 cgctgtcact ggcgtttttc aggaaatcca ccacgtcatc aatacgtgcc ctgttctctt
     7021 tggccagcca ggaggccctg accgcctgca gcagcagacc ttcatgcact tcatccaggt
     7081 taccgttggg gctggccatc actgacaact ggtcacggac acgctccgct gactggtcaa
     7141 tatcggtgat gttcgcaaac gggttaaaac gcagggtttc accgtccaga tatacgccac
     7201 ccatgttctc acacagggac ttgtagccat cccccatgtc gaacaccacg gcaaagcccc
     7261 cggagtccag cacgctgcgg ataagtggct gtatcagccc ggttttaccg gccccggagg
     7321 tgccacagac cgccatgttg tagttggtgt tattcatccc ccggaagaaa atatcgataa
     7381 acgccagctg gttacggtag gtgggtgcca gcagacctgc cggtgtcagg gggttatccg
     7441 ccactaacgg catcaggttg gcaacattaa agctctctgc gcgctgaacc actccggcct
     7501 ctttcagctg tttaaacaac cctttcccgg ccataaaggg cagacaggtc aggaaattgc
     7561 gcatgtggtt aaagcgcggt gaaatcagct caaaaccgtt tttacggaag ctgttcagga
     7621 tgtcctgctc cacttccagc gccgtttcat tgttgtcctt gcagaatgct gtgatgttga
     7681 ggaagtagga cacgacagaa gactgaccgg agcccagacg ctgacgcagt tccccccact
     7741 ccttcgcctc tttctccacg gacggaaacc atttggcata ggaggtcttc gactttttct
     7801 ccaggtccat gtacttcagg ttggcttcgc tgtgggtttt cacctggtct tccaccacca
     7861 gagtcagcgt caggatgaac ggacaggaga tggacagttc cgggttcagc aggttgctgt
     7921 agttgtcggc catattccac aggaaggcga tttccgggtt acgggccaga tggaaattca
     7981 ggatacgggc cgtgctgttc ctgccgttct cacgcaggcc cagcgtcagg taatcagccc
     8041 ggacattcag gtcaaaactg tcctccacac actgataatt cagatcagaa tacgggtcca
     8101 gctgacgtct tttcgggtac agggagtccg ggttatggtt aatcatctcc ccgacaatat
     8161 cgataaaggc ctgtgcatcc accgtctgtg tggcgatact ggccccctgt aacgacgccc
     8221 ggatgatttt caccaggttt tccatttcca gaatgtcagc ccggcttttt ttcttcgagg
     8281 gagaacagta cgagataaat acccggtaat ggcgcagggt caggggcaga ttcatcccct
     8341 ccggcagcgg aaactgtgtc gctgccgctt tcatataata ggcccgggta atggcgttaa
     8401 accgttcagc ctgttcacct gaccaggaga actcacgcag cccgtactca atcctgtcac
     8461 caaccagctg actggacatc agatggatac acaacggaat accgcgcggc agtttggtgc
     8521 gcagcatgtg atcgagtgcc tccacaatgg acttattcgc cccattgatg gg
//
LOCUS       DAPGWB010000175         8503 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.177, whole genome shotgun sequence.
ACCESSION   DAPGWB010000175 DAPGWB010000000
VERSION     DAPGWB010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8503
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.177"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            162..326
                     /locus_tag="RHX79_003988"
     CDS             162..326
                     /locus_tag="RHX79_003988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmiA family putative membrane protein"
                     /protein_id="HDV2199103.1"
                     /translation="MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVV
                     VALLIWKVWG"
     gene            329..496
                     /locus_tag="RHX79_003989"
     CDS             329..496
                     /locus_tag="RHX79_003989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199104.1"
                     /translation="MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFI
                     ELFAEDDQPKQ"
     gene            610..705
                     /locus_tag="RHX79_003990"
     CDS             610..705
                     /locus_tag="RHX79_003990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199105.1"
                     /translation="MINTNMKYWSWMGAFSLSMLFWAELLWIITH"
     gene            869..3544
                     /gene="acnA"
                     /locus_tag="RHX79_003991"
     CDS             869..3544
                     /gene="acnA"
                     /locus_tag="RHX79_003991"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HDV2199106.1"
                     /translation="MSSTLREASKDTLQAKDKTYHYYSLPLAAKSLGDITRLPKSLKV
                     LLENLLRWQDGNSVTEEDIHALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAA
                     MREAVKRLGGDTAKVNPLSPVDLVIDHSVTVDRFGDDEAFEENVRLEMERNHERYVFL
                     KWGKQAFSRFSVVPPGTGICHQVNLEYLGKAVWSELQDGEWIAYPDTLVGTDSHTTMI
                     NGLGVLGWGVGGIEAEAAMLGQPVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLR
                     KHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAVTLDYMRLSGRSE
                     DQVELVEKYAKAQGMWRNPGDEPIFTSTLELDMNDVEASLAGPKRPQDRVALPDVPKA
                     FAASNELEVNATHKDRQPVDYVMNGHQYQLPDGAVVIAAITSCTNTSNPSVLMAAGLL
                     AKKAVTLGLKRQPWVKASLAPGSKVVSDYLAKAKLTPYLDELGFNLVGYGCTTCIGNS
                     GPLPDPIETAIKKGDLTVGAVLSGNRNFEGRIHPLVKTNWLASPPLVVAYALAGNMNI
                     NLASEPIGHDRKGDPVYLKDIWPSAQEIARAVEQVSTEMFRKEYAEVFEGTAEWKEIN
                     VTRSDTYGWQEDSTYIRLSPFFDEMQATPAPVEDIHGARILAMLGDSVTTDHISPAGS
                     IKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGTFANIRIRNEMVPGVEGGMTR
                     HLPDSDVVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDWAAKGPRLLGIRVVIAESF
                     ERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEEKIDIGDLQNLQPGATVPVTLTRADG
                     SQEVVPCRCRIDTATELTYYQNDGILHYVIRNMLK"
     gene            complement(3608..4198)
                     /gene="ribA"
                     /locus_tag="RHX79_003992"
     CDS             complement(3608..4198)
                     /gene="ribA"
                     /locus_tag="RHX79_003992"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HDV2199107.1"
                     /translation="MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHT
                     PVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKI
                     RAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
                     AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK"
     gene            4368..5132
                     /gene="pgpB"
                     /locus_tag="RHX79_003993"
     CDS             4368..5132
                     /gene="pgpB"
                     /locus_tag="RHX79_003993"
                     /EC_number="3.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase B"
                     /protein_id="HDV2199108.1"
                     /translation="MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWV
                     TETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQE
                     PRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFP
                     SGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLI
                     SWALVAVATWLAQRICGPLTPPAEENREIAQREQES"
     gene            5281..5589
                     /gene="lapA"
                     /locus_tag="RHX79_003994"
     CDS             5281..5589
                     /gene="lapA"
                     /locus_tag="RHX79_003994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapA"
                     /protein_id="HDV2199109.1"
                     /translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL
                     LAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE
                     "
     gene            5596..6765
                     /gene="lapB"
                     /locus_tag="RHX79_003995"
     CDS             5596..6765
                     /gene="lapB"
                     /locus_tag="RHX79_003995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HDV2199110.1"
                     /translation="MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVN
                     FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT
                     YEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKA
                     IDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSI
                     MMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAV
                     EENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRA
                     KESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL"
     gene            6958..7695
                     /gene="pyrF"
                     /locus_tag="RHX79_003996"
     CDS             6958..7695
                     /gene="pyrF"
                     /locus_tag="RHX79_003996"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDV2199111.1"
                     /translation="MTLTASSSSRAVTNSPVVVALDYHNRDDALSFVDKIDPRDCRLK
                     VGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG
                     GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQK
                     CGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYM
                     VIGRPVTQSVDPAQTLKAINASLQRSA"
     gene            7695..8021
                     /gene="yciH"
                     /locus_tag="RHX79_003997"
     CDS             7695..8021
                     /gene="yciH"
                     /locus_tag="RHX79_003997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415798.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HDV2199112.1"
                     /translation="MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKG
                     KGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMK
                     VKLAGG"
     gene            complement(8147..8365)
                     /gene="osmB"
                     /locus_tag="RHX79_003998"
     CDS             complement(8147..8365)
                     /gene="osmB"
                     /locus_tag="RHX79_003998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmB"
                     /protein_id="HDV2199113.1"
                     /translation="MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALG
                     GAVLTDGSTLGTLGGAAVGGVIGHQVGK"
BASE COUNT         2103 a         1999 c         2236 g         2165 t
ORIGIN      
        1 gtctaattac ccgcctcgca aactccagtt ttcaaatatc tatttcaagt caaaagattg
       61 aattattcac tgagacgatt cgtaaattcg ctggattttt gactaaagtt tctttaggat
      121 ttgtctcatc gtatgattaa ttacaccaat cgttcaacgt cttgctgata agtgatggcg
      181 attatatgag gttagcaatg ccttctggaa atcaggaacc ccgccgcgat cctgaattaa
      241 aacgtaaagc ctggctggcg gtttttcttg gttctgcact tttctgggtg gttgtcgcac
      301 tgctgatttg gaaagtgtgg ggataactat ggtcggtcag gagcaactgg agtcgtcacc
      361 attatgccag catagtgaca atgaaacaga aacgaaacgg gaatgttccg tcgttattcc
      421 agacgactgg caactaacat cgcagcagca agcctttata gaactgtttg ctgaagatga
      481 tcagccgaaa caataattat catcattctt attacccatt tttaatgaat taaagggctt
      541 ttaatacacc gcagcaataa cagcttgagt tatctcaaca caaaataata accgttaagg
      601 gtgtagccta tgatcaacac aaatatgaaa tattggtcct ggatgggcgc gttttctctg
      661 tcgatgctct tctgggccga actcctctgg atcattactc actgatcctt gaccccgctg
      721 cggcggggtt gtcatttgct ttgccacaag gtttctcctc ttttatcaat ttgggttgtt
      781 atcaaatcgt tacgcgatgt ttgtgttatc tttaatattc accctgaaga gaatcagggc
      841 ttcgcaaccc tgtcattaag gaggagctat gtcgtcaacc ctacgagaag ccagtaagga
      901 cacgttgcag gccaaagata aaacttacca ctactacagc ctgccgcttg ctgctaaatc
      961 actgggcgat atcacccgtc tacccaagtc actcaaagtt ttgctcgaaa acctgctgcg
     1021 ctggcaggat ggtaactcgg ttaccgaaga ggatatccac gcgctggcag gatggctgaa
     1081 aaatgcccat gctgaccgtg aaattgccta ccgcccggca agggtgctga tgcaggactt
     1141 taccggcgta cctgccgttg ttgatctggc ggcaatgcgc gaagcggtta aacgcctcgg
     1201 cggcgatact gcaaaggtta acccgctctc accggtcgac ctggtcattg accactcggt
     1261 gaccgtcgat cgttttggtg atgatgaggc atttgaagaa aacgtacgcc tggaaatgga
     1321 gcgcaaccac gaacgttatg tgttcctgaa atggggaaag caagcgttca gtcggtttag
     1381 cgtcgtgccg ccaggcacag gcatttgcca tcaggttaac ctcgaatatc tcggcaaagc
     1441 agtgtggagt gaattgcagg acggtgaatg gattgcttat ccggatacac tcgttggtac
     1501 tgactcgcac accactatga tcaacggcct tggcgtgctg gggtggggcg tgggtgggat
     1561 cgaagcagaa gccgcaatgt taggccagcc ggtttccatg cttatcccgg acgtagtggg
     1621 ctttaaactt accggtaaat tacgtgaagg tattaccgcc acagacctgg ttctcactgt
     1681 tacccaaatg ctgcgcaaac atggcgtggt ggggaaattc gtcgaatttt atggtgatgg
     1741 tctggattca ctaccgctgg cggatcgcgc caccattgcc aatatgtcgc cagaatatgg
     1801 tgccacctgt ggcttcttcc caatcgatgc tgtaaccctc gattacatgc gtttaagcgg
     1861 gcgcagcgaa gatcaggttg agttggtcga aaaatatgcc aaagcgcagg gcatgtggcg
     1921 taacccgggc gatgaaccga tttttaccag tacgttagaa ctggatatga atgacgttga
     1981 agcgagcctg gcagggccaa aacgcccaca ggatcgcgtt gcactgcccg atgtaccaaa
     2041 agcatttgcc gccagtaacg aactggaagt gaatgccacg cataaagatc gccagccggt
     2101 cgattatgtt atgaacggac atcagtatca gttacctgat ggcgctgtgg tcattgctgc
     2161 gataacctcg tgcaccaaca cctctaaccc aagtgtgctg atggctgcag gcttgctggc
     2221 gaaaaaagcc gtaactcttg gcctcaagcg gcaaccgtgg gtcaaagcgt cgctggcacc
     2281 aggctcgaaa gttgtttctg attatctggc aaaagcgaaa ttgacaccgt atctcgacga
     2341 actggggttt aaccttgtgg gatacggttg taccacctgt attggtaact ctgggccgct
     2401 gcccgatcct atcgaaacgg caatcaaaaa aggcgattta accgtcggtg cagtgctgtc
     2461 cggcaaccgt aactttgaag gccgtatcca tccgctggtt aaaaccaact ggctggcctc
     2521 gccgccgctg gtggttgcct atgcgctggc gggaaatatg aatatcaacc tggcttctga
     2581 gcctatcggc catgatcgta aaggcgatcc ggtatatctg aaagatatct ggccatcggc
     2641 acaagaaatt gcccgtgcgg tagaacaagt ctccacagaa atgttccgca aagagtacgc
     2701 agaagttttt gaaggcacag cagagtggaa ggaaattaac gtcacacgat ccgataccta
     2761 cggttggcag gaggactcaa cctatattcg cttatcgcct ttctttgatg aaatgcaggc
     2821 aacaccagca ccagtggaag atattcacgg tgcgcggatc ctcgcaatgc tgggggattc
     2881 agtcaccact gaccatatct ctccggcggg cagtattaag cccgacagcc cagcgggtcg
     2941 atatctacaa ggtcggggtg ttgagcgaaa agactttaac tcctacggtt cgcggcgtgg
     3001 taaccatgaa gtgatgatgc gcggcacctt cgccaatatt cgcatccgta atgaaatggt
     3061 gcctggcgtt gaagggggga tgacgcggca tttacctgac agcgacgtag tctctattta
     3121 tgatgctgcg atgcgctata agcaggaaca aacgccgctg gcggtgattg ccgggaaaga
     3181 gtatggttca ggctcaagcc gtgactgggc ggcaaaaggt cctcgtctgc ttggaattcg
     3241 tgtggtgatt gccgaatcgt ttgaacgaat tcaccgttcg aatttaattg gcatgggcat
     3301 cctgccgctg gaatttccgc aaggcgtaac gcgtaaaacg ttaggactaa ccggggaaga
     3361 gaagattgat attggcgatc tgcaaaatct acaacccggt gcgacggttc cggtgacgct
     3421 tacgcgcgcg gatggtagcc aggaggtcgt accctgccgt tgtcgtatcg acaccgcgac
     3481 ggagttgacc tactaccaga acgacggcat tttgcattat gtcattcgta atatgttgaa
     3541 gtaacaagta tttgcttgcc ggttattttg cttccggcaa gcaaactaat tacacaatgc
     3601 aagagggtta tttgttcagc aaatggccca ttttctcggc tttggtatcg agataatgtt
     3661 cgttattggg gttacgacct acaatcaatg gtacgcgttc aacaatatta atccctgctt
     3721 cggtcagaat ttcgactttt ttcgggttat tggttaacaa gcggacttca ttgacgccaa
     3781 ggagtttgaa catatcagcg caaagagtga agtcgcgctc atcagcggcg aagcctaact
     3841 ggtggttagc ctctacggta tcgtaacctt gatcctgcag tgcgtaagcg cggattttat
     3901 tcagcagacc aatgttacga ccttcctgac ggtgatacag caaaatacca cggccttcct
     3961 cggcaatttg cgtcaatgcc gcttcgagct ggaagccaca atcgcagcgc aagctgaaca
     4021 gggcgtcacc ggtcagacat tcggaatgga cgcgcgcaag taccggggta tgcccggaaa
     4081 tatcgccata gactagcgcg acatgatcgt gtccggttgc cagttcttca aatcccacca
     4141 tcaggaaatc gccccatggg gttggcagtt tggcttctgc cacacgttta agctgcatga
     4201 aattctccag ataatgctgg ttctgtattg gcttattttg ccataacgag aaggggttca
     4261 cctaatcacg acgcgtcgat cgttcacgga atggcacaaa tctgtcaatt tttcctggaa
     4321 ctggcgtttt cagttatgat tgtgggactt atcaaaaagg agaggccatg cgttcgattg
     4381 ccagacgtac cgcagtggga gctgcactat tgcttgtcat gccagtagcc gtatggattt
     4441 ctggctggcg ttggcaacct ggagaacaaa gttggctact aaaagcggct ttttgggtta
     4501 ctgaaactgt cacccagccc tggggcgtca ttacacattt gattttattc ggctggtttc
     4561 tctggtgtct gcgttttcgc attaaggctg cctttgtatt atttgccatt ctggcggccg
     4621 caatccttgt gggacaaggc gttaaatcct ggatcaaaga caaagtccag gaaccacgac
     4681 cttttgttat ctggctggaa aaaacacatc atattccggt tgatgagttc tacactttaa
     4741 agcgagcaga acgcggaaat ctagtgaaag aacagttggc tgaagagaaa aatatcccac
     4801 aatatttgcg ttcacactgg cagaaagaga cggggtttgc ctttccttcc ggtcacacga
     4861 tgtttgctgc cagttgggca ctgctggccg ttggtttgct gtggccgcgt cggcgaacgt
     4921 taaccattgc tatcttgctg gtctgggcaa cgggagtcat gggaagccgc ctgctgctcg
     4981 ggatgcattg gccacgcgat ctggtagtag ctacgttgat ttcgtgggcg ctggtggcgg
     5041 tggcaacgtg gcttgcgcaa cgaatttgtg ggccattaac accacctgcg gaagaaaatc
     5101 gcgaaatagc gcaacgagaa caagaaagtt aacgctggtt gattttccga atttagccct
     5161 taaatcatca acaatgcgcg tggatgccat ttcgcagacg gcgcgaaaat ggtactttaa
     5221 agggctattg cggtaagttg accataattt attcgctcta accacataac gggaagtaat
     5281 gtgaaatatt tactcatttt cttactggtg ttagcgatct tcgtgatttc ggtcacgttg
     5341 ggtgcgcaga acgatcaaca ggtgacgttt aattatctgt tagcgcaagg ggagtaccgt
     5401 atttccacat tgctggcggt attgtttgct gcggggtttg ctatcggttg gttgatttgt
     5461 ggcctgttct ggctgcgagt tcgtgtttcc ctggcgcgcg ctgaacgtaa aataaagcga
     5521 ctggaaaacc agctttcacc cgcgactgac gtggctgtag tgccgcactc gtcagcggcg
     5581 aaggaataac tttctatgct ggagttgttg tttctgcttt tgcctgtagc cgctgcctat
     5641 ggctggtata tgggccgcag aagtgcgcaa caaaacaagc aagatgaagc caaccgcttg
     5701 tcgcgtgatt acgtagcggg ggttaacttc ctgcttagta atcaacagga taaagcggta
     5761 gacctgtttc tcgatatgct taaagaggat acaggcaccg ttgaagccca ccttacgctc
     5821 ggaaacctgt tccgttcgcg tggcgaagtt gatcgcgcta ttcgcatcca tcagacccta
     5881 atggaaagcg cctcgctgac ctatgaacag cgtctgttgg cgattcaaca actagggcgt
     5941 gattacatgg ccgccgggtt atacgaccgc gcggaagaca tgttcaatca gctgaccgat
     6001 gaaactgact tccgcattgg cgctctgcaa cagttgctac aaatctacca ggctaccagt
     6061 gagtggcaga aagcaattga tgttgccgaa cgcctggtga agctgggtaa agataaacag
     6121 cgcgtcgaaa ttgcccattt ctactgtgag ttagccctgc agcatatggc cagcgacgat
     6181 ctcgatcgtg ccatgacctt gctaaaaaaa ggggcggcgg cagataaaaa cagcgcccgc
     6241 gtatccatca tgatgggacg cgtgtttatg gcgaaaggag aatacgccaa agccgtcgaa
     6301 agtttgcaac gcgtgatatc ccaggacaga gaactggtca gcgaaacgct ggaaatgttg
     6361 caaacctgct atcagcagtt gggtaaaact gccgaatggg cagaattcct gcaacgcgcg
     6421 gtggaagaga acaccggtgc cgatgctgaa ttgatgcttg ctgatatcat cgaagcgcgc
     6481 gacggtagtg aggccgcaca ggtctatatt acgcgccagc ttcagcgtca tccgaccatg
     6541 cgtgtgttcc ataagttaat ggattaccac ttaaatgaag cggaagaagg gcgtgccaaa
     6601 gagagcctga tggtgctgcg tgacatggtt ggcgaaaagg tacgtagtaa gcctcgttat
     6661 cgctgccaga aatgtggttt taccgcatac accctctact ggcattgtcc gtcttgtcgg
     6721 gcctggtcaa ccattaaacc gattcgcggt cttgatggcc tgtaattttt aaaaaaatcc
     6781 tactttagtt acaacatact agttattgat gttccattgt gctccggcaa cgacggcgca
     6841 gaaaaagcct gccaggggaa aaatcgcaac tgttaatttt ttatttccac gggtagaatg
     6901 ctcgccgttt acctgtttcg cgccacttcc ggtgcccatc atcaagaagg tctggtcatg
     6961 acgttaactg cttcatcttc ttcccgcgct gttacgaatt ctcctgtggt tgttgccctt
     7021 gattatcata atcgtgatga cgcgctgtcc tttgtcgaca agatcgaccc acgcgattgt
     7081 cgtctgaagg tcggcaaaga gatgtttaca ttgtttgggc cacagtttgt gcgcgaactt
     7141 caacagcgtg gttttgatat ctttcttgac ctgaaattcc acgatattcc taacactgca
     7201 gcgcacgctg tcgctgctgc agctgactta ggcgtgtgga tggtgaatgt tcatgcctct
     7261 ggtggggcgc gtatgatgac cgccgcgcgt gaggcactgg ttccgtttgg caaagatgca
     7321 ccgcttttga ttgctgtgac agtgttgacc agcatggaag ccagcgacct ggtcgatctt
     7381 ggcatgacac tgtcacctgc agattatgca gaacgtctgg cggcactgac gcaaaaatgt
     7441 ggccttgatg gtgtggtgtg ttctgctcag gaagctgtgc gctttaaaca ggtattcggt
     7501 caggagttca aactggttac gccgggcatt cgtccgcagg ggagtgaagc tggtgaccag
     7561 cgccgcatta tgacgccaga acaggcgttg tcggctggtg ttgattatat ggtgattggt
     7621 cgcccggtaa cgcaatcggt agatccagcg cagacgctga aagcgatcaa cgcctcttta
     7681 cagcggagtg catgatgagt gattccaaca gccgtctggt ctactcaacg gaaaccggac
     7741 gtattgatga gcccaaagcg gcccctgtac gccctaaagg cgacggtgtg gtgcgtattc
     7801 agcgtcagac cagtggacgt aaaggtaagg gcgtttgcct gattaccggt gtcgatctcg
     7861 atgatgccga actgacaaaa cttgcagcgg aactgaagaa aaaatgcggc tgcggcggag
     7921 cagttaaaga tggagttatt gaaatccagg gcgataagcg tgatttatta aaatcactac
     7981 ttgaagcgaa agggatgaag gtaaaactcg caggcggtta acataaaaag ccacggatat
     8041 atccgtggct ttcgaatatt ttactgtgcg tattattcag ttatttcgta ctgaacagaa
     8101 tcaagcgtat tataattgcg agtcgataat cgacatttat ttacgattat ttaccgacct
     8161 ggtgaccaat aacaccaccg acagctgcac cacctaatgt acccaacgta ctgccatcgg
     8221 tcagtactgc accgcctaat gcccctgcac ccgcgccgat tgcggtgttg cggtcccgtt
     8281 tagaccagtt agaacaggca ctcagagaca ttgccaaagt aattgccaga acagccgcgg
     8341 tcattttttt gctcgttaca aacataatac tctctcctga atttatgatt cacggaagta
     8401 agctctctat aactataata gctaagaata agcttggtga aattattccg tgaaatctgc
     8461 tcgcgcgcag ggttatatca cgcaggtgat aatgacttcc tgt
//
LOCUS       DAPGWB010000176         8485 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.178, whole genome shotgun sequence.
ACCESSION   DAPGWB010000176 DAPGWB010000000
VERSION     DAPGWB010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8485
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.178"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            135..1238
                     /gene="ompC"
                     /locus_tag="RHX79_003999"
     CDS             135..1238
                     /gene="ompC"
                     /locus_tag="RHX79_003999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HDV2199114.1"
                     /translation="MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLK
                     FQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFGL
                     VDGLNFAVQYQGKNGSVSGEGMTNNGRDALRQNGDGVGGSITYDYEGFGIGAAVSSSK
                     RTDAQNTAAYIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNF
                     EAVAQYQFDFGLRPSVAYLQSKGKNLGTIAGRNYDDEDILKYVDVGATYYFNKNMSTY
                     VDYKINLLDDNQFTRDAGINTDNIVALGLVYQF"
     gene            1350..2405
                     /gene="apbE"
                     /locus_tag="RHX79_004000"
     CDS             1350..2405
                     /gene="apbE"
                     /locus_tag="RHX79_004000"
                     /EC_number="2.7.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase ApbE"
                     /protein_id="HDV2199115.1"
                     /translation="MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGT
                     FWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEA
                     MAEIVTTSLRIGAKTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDAMKAKTGLQH
                     LTVINQSHQQYLQKDLPDLYIDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALDSR
                     GMNGEGQPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQ
                     TGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSF
                     KTWMSPQFKSFLISEKN"
     gene            2479..3543
                     /gene="ada"
                     /locus_tag="RHX79_004001"
     CDS             2479..3543
                     /gene="ada"
                     /locus_tag="RHX79_004001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HDV2199116.1"
                     /translation="MKKATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRA
                     RHALRENVSFYANASEALAAGFRPCKRCQPDKANAQQHRLDKITHACRLLEQETPVTL
                     EALADQVAMSPFHLHRLFKATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFP
                     DSSSYYRKADETLGMTAKQFRHGGENLAVRYALADCALGRCLVAESERGICAILLGDD
                     DATLISELQQMFPAADNAPADLMFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVW
                     QALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIIIPCHRVVRGDGTLSGY
                     RWGVSRKAQLLRREAENEER"
     gene            3543..4193
                     /gene="alkB"
                     /locus_tag="RHX79_004002"
     CDS             3543..4193
                     /gene="alkB"
                     /locus_tag="RHX79_004002"
                     /EC_number="1.14.11.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA oxidative demethylase AlkB"
                     /protein_id="HDV2199117.1"
                     /translation="MLDLFADAEPWQEPLAAGAVILHRFAFNAAEQLIRDINNVASQS
                     PFRQMVTPGGYTMSVAMTNCGHLGWTSHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQR
                     AATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK
                     RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTTDCRYNLTFRQAGKKE"
     gene            4269..5912
                     /gene="yojI"
                     /locus_tag="RHX79_004003"
     CDS             4269..5912
                     /gene="yojI"
                     /locus_tag="RHX79_004003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin J25 efflux ABC transporter YojI"
                     /protein_id="HDV2199118.1"
                     /translation="MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETA
                     DTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL
                     GSASLLAGLTSDVRNITIAFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAIT
                     IWGGFVLVARVYKHMATLRETEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDA
                     QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR
                     TPLLSAVGALPTLLTAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFSYQD
                     NAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQP
                     EDYRKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNLKL
                     SKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISH
                     DDHYFIHADRLLEMRNGQLSELTGEERDAASRDAVARTA"
     gene            6130..7776
                     /gene="mqo"
                     /locus_tag="RHX79_004004"
     CDS             6130..7776
                     /gene="mqo"
                     /locus_tag="RHX79_004004"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HDV2199119.1"
                     /translation="MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSA
                     TLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISI
                     EKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAAL
                     QQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIAS
                     LQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLL
                     QESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLD
                     GKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVML
                     SEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDAEKGGVLRLGTEVVSDQQGTIA
                     ALLGASPGASTAAPIMLDLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERE
                     LQYTSEVLGLKYDKPQAADSTPKPQLKPQPVQKEVADIAL"
     gene            complement(7925..8413)
                     /gene="eco"
                     /locus_tag="RHX79_004005"
     CDS             complement(7925..8413)
                     /gene="eco"
                     /locus_tag="RHX79_004005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease inhibitor ecotin"
                     /protein_id="HDV2199120.1"
                     /translation="MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQV
                     IQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKTLEGWGYDYYVFDKVSSPVS
                     TMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAV
                     VR"
BASE COUNT         2024 a         2130 c         2300 g         2031 t
ORIGIN      
        1 gttttagtat catattcgtg ttggattatt ctgcattttt ggggagaatg gacttgccga
       61 ctgattaatg agggttaatc agtatgcagt ggcataaaaa agcaaataaa ggcatataac
      121 agagggttaa taacatgaaa gttaaagtac tgtccctcct ggtcccagct ctgctggtag
      181 caggcgcagc aaacgctgct gaagtttaca acaaagacgg caacaaatta gatctgtacg
      241 gtaaagtaga cggcctgcac tatttctctg acaacaaaga tgtagatggc gaccagacct
      301 acatgcgtct tggcttcaaa ggtgaaactc aggttactga ccagctgacc ggttacggcc
      361 agtgggaata tcagatccag ggcaacagcg ctgaaaacga aaacaactcc tggacccgtg
      421 tggcattcgc aggtctgaaa ttccaggatg tgggttcttt cgactacggt cgtaactacg
      481 gcgttgttta cgacgtaact tcctggaccg acgtactgcc agaattcggt ggcgacacct
      541 acggttctga caacttcatg cagcagcgtg gtaacggctt tgcgacctac cgtaacactg
      601 acttcttcgg tctggttgac ggcctgaact ttgctgttca gtaccagggc aaaaacggta
      661 gcgtaagcgg cgaaggcatg accaacaatg gtcgcgatgc tctgcgtcag aacggcgacg
      721 gcgttggcgg ttctatcact tatgattacg aaggcttcgg tatcggtgct gcagtttcca
      781 gctccaaacg tactgatgct cagaacaccg ctgcttacat cggtaacggc gaccgtgctg
      841 aaacctacac cggtggtctg aaatacgacg ctaacaacat ctacctggct gctcagtaca
      901 cccagaccta taacgcaact cgcgtaggtt ccctgggttg ggcgaacaaa gcacagaact
      961 ttgaagctgt tgctcagtac cagttcgact tcggtctgcg tccgtctgta gcatacctgc
     1021 agtctaaagg taaaaacctg ggtaccatcg ctggtcgtaa ctacgacgac gaagatatcc
     1081 tgaaatatgt tgatgttggc gcgacctact acttcaacaa aaacatgtcc acctacgttg
     1141 actacaaaat caacctgctg gacgacaacc agttcactcg tgacgctggc atcaacactg
     1201 ataacatcgt agctctgggt ctggtttacc agttctaatc tcgattggta tcgaacaaag
     1261 ggcctgcggg cccttttttc attgttttca gcgtacaaac tcattttttt ggtgtactct
     1321 tgcgaccgtt cgcatgagga taatcacgta tggaaataag ctttacccgc gtggcactgc
     1381 tggctgccgc gctcttcttt gttggttgcg atcaaaaacc acaacccgcc aaaacccacg
     1441 ctactgaagt taccgttctt gaaggcaaaa ccatgggtac cttctggcgt gccagcatcc
     1501 cgggcattga tgccaaacgc agtgccgaac ttaaagaaaa gattcagacc cagctggacg
     1561 ccgacgatca gctgctttcg acctataaaa aagattccgc gctgatgcgc tttaacgact
     1621 cgcaaagttt gtcgccgtgg ccggtaagtg aagcgatggc cgaaatcgtc actacctcgc
     1681 tgcgcattgg cgcgaagacc gatggtgcga tggatattac cgtcgggccg ctggtgaatc
     1741 tgtggggctt tggcccggaa caacagccgg ttcaaattcc gagccaggaa cagatcgatg
     1801 cgatgaaagc caaaaccggc ttacagcacc tgacggtcat caatcagtcg catcagcaat
     1861 atctgcaaaa agacctgccg gatttatata tcgatctctc caccgtcggt gaaggttatg
     1921 cggcggatca cctggcacgc ttgatggagc aggaaggtat ttcacgttat ctggtgtcag
     1981 ttggtggtgc tctggatagc cgtggtatga acggtgaagg ccagccgtgg cgggtagcga
     2041 ttcaaaaacc aaccgataaa gaaaacgcgg ttcaggccgt ggtggatatc aacggtcatg
     2101 gcattagcac ctctggcagc taccgtaact attacgaact ggacggcaaa cgtctttctc
     2161 atgttatcga tccgcaaacc gggcgtccta tcgaacacaa tctggtatcc gtgacggtga
     2221 ttgccccgac ggcgctggaa gccgatgcct gggatactgg cttaatggta ctcgggccgg
     2281 agaaagccaa agaggttgtt cgccgggaag ggctggcggt ctatatgatc accaaagaag
     2341 gtgatagctt taaaacctgg atgtcgccgc agtttaaaag cttccttatc agcgaaaaaa
     2401 attaaagcgc aagattgttg gtttttgcgt gatggtgacc gggcagacta aaggctatcc
     2461 ttaaccaggg agctgattat gaaaaaagcc acatgcttaa ctgacgatca acgctggcaa
     2521 tctgtcttag cccgcgaccc gaatgccgac ggcgaattcg ttttcgccgt gcgtaccaca
     2581 ggcatctttt gccgtccgtc ttgccgcgcc agacatgctt tgcgggaaaa cgtctccttc
     2641 tacgcaaatg ccagcgaggc actcgccgct ggctttcgcc cctgcaaacg ctgccaacct
     2701 gataaagcca atgcccagca acatcggttg gataaaatca cccacgcgtg tcgactgctg
     2761 gaacaggaaa cgcctgtaac gttggaagcc ttagccgatc aggtggcgat gagtccgttc
     2821 catctgcatc ggttgtttaa agcgactacc ggaatgacgc ctaaagcctg gcaacaggcc
     2881 tggcgcgctc gccgtttgcg cgaatcgctg gcgaaagggg agagcgtgac gacgtctatt
     2941 cttaacgccg gattccccga cagcagcagt tactaccgca aagccgatga aacgctgggc
     3001 atgacggcta aacaattccg tcacggtggc gaaaatctgg cggtgcgtta cgcgctggct
     3061 gattgtgcgc tggggcgttg cctggtggca gaaagcgagc gggggatttg cgcgatatta
     3121 ctgggcgatg atgacgcgac actaatcagc gagttgcagc agatgtttcc cgctgccgac
     3181 aacgcgcctg ccgatctgat gtttcagcaa catgtgcgtg aagtgatcgc cagcctcaat
     3241 caacgcgata cgccgctgac gttaccgctg gacattcgcg gcactgcttt tcagcaacaa
     3301 gtctggcagg cactgcgcac gataccttgc ggtgaaaccg tcagttatca gcaactggct
     3361 aacgccatcg gcaaaccgaa agcggtacgg gccgttgcca gcgcctgtgc cgccaacaag
     3421 ctggctatca taataccctg tcatcgggtg gtccgtggtg atggcacact ttccggttac
     3481 cgctggggcg tgtcgcgtaa agcgcaactg ctgcgccgcg aagctgaaaa tgaggagagg
     3541 taatgttgga tctgtttgcc gatgctgaac cgtggcaaga gccactggcg gctggagcgg
     3601 taattttgca ccgttttgct tttaacgctg cggagcaact gatccgcgat attaataacg
     3661 ttgccagcca gtcgccgttt cgccagatgg tcacccccgg gggatatacc atgtcggtgg
     3721 cgatgaccaa ctgtgggcat ctgggctgga cgagccatcg gcaaggttat ctctattcgc
     3781 ccattgatcc gcaaacaaat aaaccgtggc ccgccatgcc acagagtttt cataatttat
     3841 gtcaacgtgc ggctacggcg gcgggctatc cagatttcca gccagatgct tgtcttatca
     3901 accgctacgc tcctggcgcg aaactgtcgc tgcatcagga taaagacgaa ccggatctgc
     3961 gcgcgccaat tgtttctgtt tctctgggct tacccgcgat ttttcaattt ggtggcctga
     4021 aacgtaatga tccgctcaaa cgtttgttgt tggaacatgg cgatgtggtg gtatggggcg
     4081 gtgaatcgcg gctgttttat cacggtattc aaccgttgaa agcggggttt catccactca
     4141 ccaccgactg ccgctacaac ctgacattcc gtcaggcagg taaaaaagaa taaaaataag
     4201 aattattatt gctgtgcgcg cgaagatgtt taaactgcgg gctgtaattc attgtccggg
     4261 ttttctgcat ggaacttctt gtacttgtct ggcggcagta tcgctggcca tttatcagtg
     4321 tgatggcgct aagcctcgcc agtgcggcat taggcattgg cttaattgct tttatcaatc
     4381 agcgccttat cgaaacggcg gataccagtc tgctggtgtt gccggagttt ctgggattat
     4441 tgctgctgtt gatggcagtc actctcggat cgcaactggc gctcaccact ttggggcatc
     4501 acttcgttta ccgactgcgt agtgaattta tcaagcggat tctggatacc cacgtcgagc
     4561 gcattgaaca actcggtagc gcctcgttgc tggcgggatt aaccagcgat gtgcgcaata
     4621 tcaccattgc ttttgtgcgt cttccggaac tggtgcaggg gatcattctc actatcggtt
     4681 ccgcggcgta tctgtggatg ctgtcgggca aaatgttgct ggtaacggct atctggatgg
     4741 cgatcaccat ctggggtggt tttgtactgg tggcgcgggt gtacaaacat atggcgaccc
     4801 tgcgtgaaac cgaagacaag ctgtacacgg attttcaaac cgtactcgaa gggcgcaaag
     4861 agctgactct gaaccgggaa cgcgccgagt atgtgtttaa caacctctac atccccgatg
     4921 cgcaagagta tcgccatcat attattcgcg cagacacctt ccatcttagc gccgtgaact
     4981 ggtcaaacat catgatgctg ggcgctatcg gcctggtgtt ctggatggcg aacagtctcg
     5041 gttgggctga taccaacgtt gctgcgacct attcgttgac gctgttattc ctgcgtacgc
     5101 cgctgctttc ggcggttggc gcattgccga cgctgctgac ggcgcaggtg gcgtttaaca
     5161 agctgaacaa attcgcgctc gcgcctttca aagctgagtt tccgcgcccg caggcttttc
     5221 ccaactggca aacgctggag ctgcgtaacg tgacgtttag ctatcaggat aacgcgtttt
     5281 ccgttgggcc gattaacctc accattaaac gtggcgagct gctgtttctg attggtggca
     5341 acggtagtgg aaaatcgacg ctggcgatgt tgctgacggg cttgtaccag ccacaaagcg
     5401 gcgaaatctt gctggatggc aaacctgtca gtggcgaaca accggaagat tatcgcaaac
     5461 tgttttcggc agtgtttacc gatgtctggc tgtttgatca actgctgggg ccggagggta
     5521 aacccgctaa cccgcaactg gttgagaagt ggctggcgca gctgaaaatg gctcataagc
     5581 ttgagttaag caacgggcgt attgttaacc tgaagttatc aaaagggcag aaaaaacgcg
     5641 tggcgctgtt gctggcgctg gcagaagaac gcgatattat cctgctggat gaatgggcgg
     5701 cggatcagga tccacacttc cgtcgtgagt tttatcaggt gttgctgccg ctgatgcagg
     5761 agatgggtaa aactattttc gctatcagtc atgatgatca ttactttatc cacgccgacc
     5821 gcctgctgga aatgcgcaat gggcaactta gcgagctgac gggcgaagag cgcgatgccg
     5881 cttcgcgtga tgccgttgcc cggacggcat aatattacga cgctgacctg gcggactgct
     5941 gccgtcaggt caatatgcta aaaatccctt catttctaat aaccctataa ttaatcaacg
     6001 aaattataat gtttctaaaa ttagaatata atttataaac attatttaaa tgttgttact
     6061 taagtgttac cgttgatgcc gcgcaaatct cacctgcaat aaagcgacta aaagtaaggc
     6121 attaacaaga tgaaaaaagt gactgccatg ctcttctcga tggccgtggg gcttaatgcc
     6181 gtttcgatgg cggcaaaagc gaaagcgtcc gaggagcagg aaactgatgt actgttgatt
     6241 ggcggcggca ttatgagcgc cacgttgggg acctatttac gcgagctgga gcctgaatgg
     6301 tcgatgacca tggtggagcg cctggagggt gtcgcgcagg agagttcgaa cggctggaat
     6361 aacgccggaa ccgggcattc tgcactgatg gaactgaact acaccccgca aaacgccgat
     6421 ggcagcatca gtattgaaaa agcagtcgcc attaacgaag catttcagat ttcccgccag
     6481 ttctgggcgc accaggttga gcgcggcgtg ctgcgtactc cgcgttcatt tatcaatacc
     6541 gttccgcata tgagctttgt ctggggcgag gataacgtta atttcctgcg cgcccgttac
     6601 gccgcgttgc aacaaagctc gctgtttcgc ggtatgcgtt actctgaaga tcacgcgcag
     6661 atcaaagagt gggcaccgtt agtgatggaa gggcgcgatc cacaacagaa agtagcggca
     6721 acacgcacag aaattggcac tgatgtgaac tatggcgaga tcacccgcca gttaattgct
     6781 tccttacaga agaaatctaa cttctcgctg caactcagca gcgaagtccg cgccctaaag
     6841 cgtaatgacg ataacacctg gaccgttacc gttgccgatc tgaaaaacgg cactgcacag
     6901 aacatccgcg ccaaatttgt ctttatcggc gcgggcggtg cggcgctgaa gctattacag
     6961 gaatcgggga ttccggaagc gaaagactac gccggtttcc cggtgggcgg acagttcctt
     7021 gtttcggaaa acccggacgt ggttaatcac catctggcga aggtttacgg taaagcatcc
     7081 gttggcgcac caccgatgtc ggttccgcat atcgataccc gcgttctgga cggtaaacgc
     7141 gtagtgctgt ttgggccatt tgccaccttc tcaaccaaat tcctcaaaaa cggttcattg
     7201 tgggatctga tgagttccac caccacctct aacgtgatgc cgatgatgca cgtcgggctg
     7261 gataatttcg atctggtgaa atatctggtg agtcaggtga tgttgagtga agaggatcgt
     7321 tttgaagcgt tgaaagagta ctatccgcag gcaaaaaaag aggactggcg tttgtggcaa
     7381 gcggggcagc gcgtgcagat tatcaagcgt gatgccgaga aaggtggcgt actgcgtctg
     7441 ggtactgaag tggtcagtga ccagcaaggg accattgccg cgctgctggg ggcatcgcca
     7501 ggggcgtcaa ccgccgcgcc gattatgttg gatctgctgg aaaaagtatt tggcgatcgc
     7561 gtttccagcc cgcaatggca ggctacgttg aaagcgatcg ttccgtctta tggacgcaag
     7621 ctgaacggtg atgtagcggc aacagaacgc gagttgcagt acaccagcga agtgctgggg
     7681 ctgaaatacg acaagccgca ggcagcagat agtacgccaa aaccgcagtt gaaaccgcaa
     7741 cccgttcaaa aagaagtggc ggatattgcg ttgtaatgat gtgccacatc cggcatggta
     7801 tgccggatgt ggcgtatgct gataagacgc gccagcgtcg catcaggcac cggctcgggc
     7861 gttagatgtc ggatgcggcg tgaccgcctt attcggccta cggggtgccg cacttcacag
     7921 cattttagcg aactaccgcg ttgtcaattt tctcttccgc cttccagacg cggtacttca
     7981 catctacatt gtctggcgta tacaccacga tcggcagctt gctgttgtaa cgcagcattc
     8041 cagcatcgcc cagatacgcg gtgacaaatt tcttctcttt cttgccatcc gggcaggcca
     8101 tcatcgtcga aaccggggaa ctgactttat caaagacata ataatcatag ccccagcctt
     8161 ccagcgtttt gttttccagc ttcccgccga gacgatgcaa attgcaatcg acttccagcg
     8221 tctgaccgat taacagttct actttcaggg tagattcatc ttcttgcggg gttaactgaa
     8281 tcacctgacg cttcatccct ttttcagctt gtggataagg cgcgattttt tccagtggct
     8341 ggacgctttc tgccgcccag gcggaagtgg tagcgaaagc ggcaaacaat actgcaggta
     8401 gaatggtctt catttttttg ctttccttct tcatttatag gttttcaccg atgatgtcgc
     8461 tgaaggttaa catattcatc agatt
//
LOCUS       DAPGWB010000177         8399 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.179, whole genome shotgun sequence.
ACCESSION   DAPGWB010000177 DAPGWB010000000
VERSION     DAPGWB010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8399
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.179"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(60..1652)
                     /locus_tag="RHX79_004006"
     CDS             complement(60..1652)
                     /locus_tag="RHX79_004006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HDV2199121.1"
                     /translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM
                     KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRI
                     YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW
                     KLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV
                     CTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA
                     SKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPL
                     FKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHE
                     YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG
                     KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEI
                     TPERVIDFSGNYEDYLRSKGIE"
     gene            1871..2791
                     /gene="ldtB"
                     /locus_tag="RHX79_004007"
     CDS             1871..2791
                     /gene="ldtB"
                     /locus_tag="RHX79_004007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HDV2199122.1"
                     /translation="MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVIT
                     IPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIV
                     INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE
                     YRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDI
                     KFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKS
                     VQTVTGQPDVDQVVLDEAIKNRSGMPVRLN"
     gene            complement(2849..3967)
                     /locus_tag="RHX79_004008"
     CDS             complement(2849..3967)
                     /locus_tag="RHX79_004008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion transporter"
                     /protein_id="HDV2199123.1"
                     /translation="MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHT
                     IITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVAL
                     FIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFI
                     AQMAPLAGAMMLTLLLLCWCCFPGKALQYHTGVQTPEWKPRLVWSCLGLYIVFLTALE
                     LKQELWGLVIVAVGFALLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGMLGNVS
                     HLSEPGLWLTAIGLSQVISNVPSTILLLNYVPPSLLLAWAVNVGGFGLLPGSLANLIA
                     LRMANDRRIWWRFHLYSIPMLLWASLVGYVLLVMIPDW"
     gene            complement(3964..4431)
                     /gene="mntR"
                     /locus_tag="RHX79_004009"
     CDS             complement(3964..4431)
                     /gene="mntR"
                     /locus_tag="RHX79_004009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-binding transcriptional regulator
                     MntR"
                     /protein_id="HDV2199124.1"
                     /translation="MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL
                     ISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLA
                     QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK"
     gene            4617..4745
                     /gene="mntS"
                     /locus_tag="RHX79_004010"
     CDS             4617..4745
                     /gene="mntS"
                     /locus_tag="RHX79_004010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganase accumulation protein MntS"
                     /protein_id="HDV2199125.1"
                     /translation="MNEFKRCMRVFSHSPFKVRLMLLSMLCDMVNNKPQQDKPSDK"
     gene            5017..6600
                     /gene="opgE"
                     /locus_tag="RHX79_004011"
     CDS             5017..6600
                     /gene="opgE"
                     /locus_tag="RHX79_004011"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HDV2199126.1"
                     /translation="MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA
                     AFTAILLLLWRTLPRVQKVLVGISSLVAACYFPFAQAYGAPNFNTLLALHSTNMEEST
                     EILTIFPWYSYMVGIFIFVLGVIAIRRKKESEKARWNTFDSLCLVFSVATFFVAPVQN
                     LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQT
                     YVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVD
                     GKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADK
                     NTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLY
                     TMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVP
                     FMVISSDDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGSIYITNF
                     QLQKVDYNHLGTDIFDPKP"
     gene            complement(6649..7164)
                     /gene="ompX"
                     /locus_tag="RHX79_004012"
     CDS             complement(6649..7164)
                     /gene="ompX"
                     /locus_tag="RHX79_004012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpX"
                     /protein_id="HDV2199127.1"
                     /translation="MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKM
                     GGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASI
                     YGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV
                     GTWIAGVGYRF"
     gene            complement(7217..7282)
                     /locus_tag="RHX79_004013"
     CDS             complement(7217..7282)
                     /locus_tag="RHX79_004013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199128.1"
                     /translation="METFCYMKWPVRHHKSRRVSH"
     gene            7517..>8399
                     /gene="rhtA"
                     /locus_tag="RHX79_004014"
     CDS             7517..>8399
                     /gene="rhtA"
                     /locus_tag="RHX79_004014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/homoserine exporter RhtA"
                     /protein_id="HDV2199129.1"
                     /translation="MPGSLRKMPVWLPIIILLVAMASIQGGASLAKSLFPLVGAPGVT
                     ALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA
                     LEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACW
                     AIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILS
                     TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAAS
                     MGSTLTVRKESKIKELDI"
BASE COUNT         2080 a         2224 c         2006 g         2089 t
ORIGIN      
        1 attttgcatt tgtcatcagc cgccgtcacc ccgacagtat cggggtgacg gataatcact
       61 tactcgatcc ctttactacg caggtaatct tcgtaattac cgctaaagtc gatcacgcgt
      121 tccggggtga tttccagaat gcgggtcgcc agggagctta cgaactcacg gtcgtgtgaa
      181 acaaagatca gcgtgccctg atacagttcc agcgccatgt tcagtgactc gatggattcc
      241 atatccaggt ggttggtcgg ttcgtccatg atcagaatgt tcggcttctg catcattaac
      301 ttaccaaaaa gcatccgccc tttttctcca ccggaaagca ctttagctgg ctttttgatg
      361 tcgtcctggc tgaacagcaa acgaccgaga atgctgcgta ccgcctgctc gtcatcgcct
      421 tcctgcttcc actggctcat ccattcgaac acggtcagat cattttcaaa ctcatattcg
      481 tggtcctggg cgtagtaacc aatgcgcgcg ttttcagacc attttacggt gccgctgtcc
      541 ggttgcagat cgcccaccag cgttttcagc agcgttgatt taccgacgcc gttggtaccc
      601 agtaccgcaa gtttttcacc gacctccagc agcaggttga gatttttaaa cagtggaccg
      661 ttatcaaacc ctttggtcag accttccact tccagcgcgt tacggaacag tttcttatcc
      721 tgttcaaaac ggatgaacgg gttctgacgg ctggaggctt tcacctcttc cagtttgatt
      781 ttatcaatct ggcgcgcgcg cgaagttgcc tggcgagatt tcgaggcgtt ggcgctaaag
      841 cggctaacga aagattgcaa ctcagcaatc tgcgctttct tcttggcgtt atcggccagc
      901 agacgttcac gcgcctgggt cgccgccgtc atgtactcat cgtagttacc cggataaacg
      961 cgcagctcgc cgtaatccag atccgccatg tgggtacaga ccatgttaag gaagtgacgg
     1021 tcgtgcgaga tgatgatcat ggtgctgtca cgctcgttca gcacctgttc cagccagcga
     1081 atggtgtcga tgtcgaggtt gttggtcggt tcgtcgagca ggagaatatc cggatcagca
     1141 aacagcgcct gcgccagaag cacacgcagc ttccagccag gagcaacttc actcatcggg
     1201 ccgtagtgct gttccactgg aattcccacg ccaagcaaca attcaccggc gcgagcttcc
     1261 gcagagtaac cgtccatttc gccgtattta acttccagat cggccacttt atagccgtct
     1321 tcctcactca tttccggcaa agcatagatg cggtcacgct cctgcttcac ttcccacaac
     1381 tctttatgcc ccatgatcac cgtatccagc acagtgaact cttcaaaggc aaactgatcc
     1441 tgacgcagct taccaatgcg ctcgttggga tcgagggaaa cgttacccaa agtcggctct
     1501 aagtcgccgc cgaggatctt cataaaggtg gatttaccac taccgttcgc gccaatcagg
     1561 ccgtaacggt tgccgccgcc aaatttgacg gaaatgtttt caaacaacgg cttactgccg
     1621 aactgcatgg tgacgttact ggaaactaac acaggcgtat cctgaaaaga gatatgacaa
     1681 accgcgcatt atgccataag tctgaaagaa gatcctgctc ctcgcttaag gtctacactc
     1741 aagccaaagg caaaaaatgt gatttcgtac acatctgatt tcactgtgag ctggaatgaa
     1801 cttataatgc gcttccaata ctctaatatt ctcaacccaa tggcctgcca ggcacaaaat
     1861 ctcgcttaac atgaatatga aattgaaaac attattcgca gcggccttcg ctgttgtcgg
     1921 cttttgcagt accgcctctg cggtaactta tcctctgcca accgacggga gtcgcctggt
     1981 tggtcagaat caggtgatca ccattcctga aggtaacact cagccgctgg agtattttgc
     2041 cgcggagtac cagatggggc tttccaatat gatggaagcg aacccgggtg tggatacctt
     2101 cctgccgaaa ggcggtactg tactgaacat tccgcagcag ctgatcctgc cggataccgt
     2161 tcatgaaggc atcgtcatta acagtgcaga gatgcgtctg tattactatc cgaaagggac
     2221 caacaccgtt atcgtgctgc cgatcggcat tggtcagtta ggcaaagata cgcctatcaa
     2281 ctggaccacc aaagttgagc gtaagaaagc aggcccgacc tggacgccga ccgccaaaat
     2341 gcacgcagag taccgcgctg cgggcgaacc gcttccggct gtcgttccgg caggtccgga
     2401 taacccgatg gggctgtatg cactctacat cggtcgcctg tacgctatcc atggcaccaa
     2461 cgctaacttc ggtatcggtc tgcgtgtaag tcatggttgt gtgcgtctgc gtaacgaaga
     2521 catcaaattc ctgttcgaga aagtaccggt cggtacccgc gtacagttta ttgatgagcc
     2581 ggtaaaagcg accaccgagc cagacggcag ccgttatatt gaagtccata atccgctgtc
     2641 taccaccgaa gcccagtttg aaggacagga aattgtgcca attaccctga cgaagagcgt
     2701 gcagacagtg accggtcagc cagatgttga ccaggttgtt cttgatgaag cgatcaaaaa
     2761 tcgttccggg atgccggttc gtctgaatta atcgtcaaaa cgtaaaacaa aggcggactc
     2821 ataatccgcc ttttttattt gccagacctt accagtccgg gatcataacc aacaaaacat
     2881 atcccaccag cgacgcccac aacagcatcg gtattgaata gagatggaaa cgccaccaga
     2941 tgcggcgatc gttcgccata cgtagcgcaa tcaaatttgc cagcgatccg ggtaataacc
     3001 caaagccacc tacatttacc gcccatgcca gtaataaaga cggcggcaca tagttcagca
     3061 acaatatggt actcggcacg ttactgatca cctgcgataa accgattgcc gttaaccata
     3121 atccgggttc agataaatga ctcacgttac ccaacatgcc ttgcaacgct ggaagctggg
     3181 tcagtaaatg gacgtcgata aacatcgcca taaacaccag cagcagcgtc cagtccacac
     3241 tcaacaccac gcgacgtgcc agcagcgcaa agcccaccgc cacaatcacc agtccccaca
     3301 gctcttgttt taactccagc gccgtcagaa agacgatata cagccccaga caactccaca
     3361 ccagccgcgg tttccactcc ggtgtttgca cccccgtatg gtattgcagc gcctttccag
     3421 ggaaacaaca ccagcacaac agcaggagcg tcagcatcat tgcgccagcc agcggtgcca
     3481 tttgggcaat aaatccggca aacgaaagac cagaacgtcc ccagataaga atattttgcg
     3541 ggttgccaat tggcgtcagt agcgaaccag cgttgactgc cagcgcctca aaaataatca
     3601 gccgattaac cgggatctca cacagtcttt ttagcgtgat agtcagcgga acaacaataa
     3661 acagcgcgac atcgttggtc agaaaggtag aaagcagcgc cgccgccagt accataaaca
     3721 tcgccagccg acgctccgta gcaaagcggc gcaccatttt gcgccccagc acatcaaaat
     3781 agccacttaa ctccacacct ttggtcagca gcatcaggcc gcttaaggtg atgatggtgt
     3841 gccagtcgat agcagcaggc caggatttcg gtgcaaaggg aacgaaaaaa cttaatccga
     3901 taccaacaag aattaataac tgaaaaaaac gatcgccttg cagcgtgcgt aaaaaaggca
     3961 ggctcatttg gcaccgtgtt tctgggtaaa caaacgaaaa gcgtcgagcg tctcttcact
     4021 aacatggtgc tccatgcctt ccgcgtcgcg acgggcgatt tccggactga cgcccaacac
     4081 caacaagaaa ttttcgacta tctgatgtcg ctcgcggctt tcctgcgcca gcttctctcc
     4141 ttctgccgtt aaaaacacgc cacgccaggg gatcatttca atcagcccca tagttgccag
     4201 tcgcttaagc attttagcca ccgtcggttg cgaaactccc aaacgagcag ccatgtctac
     4261 ctgacgagct tcccccactt ccctgatcaa gtcagaaatc agctcaacgt aatcatcaat
     4321 aagctcgcgc cgatgcgcct ctctgacctg gcggaaccct tcaacgtgct cttccacgtt
     4381 cactaactgc gtcacttttt ttgctgttgg cgtacctgcg cgacgactca ttgtgcttcc
     4441 tcattatggt gacgcataca tagcgttctc atttcgtgcg cacattgtaa accagagttg
     4501 cgaaggtaca aaaaattaac gttttagcaa tagctatata atatagcctg tgctatatct
     4561 gtatgtaatg caatcatccc tcaaggatcg acgggattag caagtcagga ggtcttatga
     4621 atgagttcaa gaggtgtatg cgcgtgttta gtcattctcc ctttaaagta cggttaatgc
     4681 tgctctctat gttgtgcgat atggtcaaca acaaaccgca gcaagataaa ccttccgata
     4741 aatagcggcg tcgcggtacg ccgcttcact cctgctttta tgcaggcaca acgcgttttg
     4801 gtctgaaaaa ccccactttt tgtcggattt gcaatcccct tcgcaaaaga tttgtacgtc
     4861 agtagttgac ctgaacggcg gctcgctcta tcttcttgca gccctgcgta tattgcggct
     4921 cgcggatgcg gacccctttc cactcttcac gcactcttgc aggtattgac ccttgacgcc
     4981 agggtaagca catggcgttt gttacgatag tggcatatga atttaaccct caaagaatcg
     5041 cttgttaccc gtagccgggt atttagcccg tggactgcgt tctacttttt acagtcgcta
     5101 ttaattaacc tcggcttagg ttaccccttc agtttgctct acaccgctgc gtttacggct
     5161 attttgcttt tgctatggcg aacattgcct cgcgtacaaa aagttctggt cggtatcagt
     5221 tcgctggtgg cggcttgtta tttccctttt gctcaggcct acggcgcgcc taacttcaat
     5281 acattgctgg cattgcactc caccaatatg gaagagtcga ccgaaatcct gacgattttt
     5341 ccgtggtaca gctacatggt cggcatattt atttttgtgc tcggcgtaat agcaatcagg
     5401 cgaaaaaaag agagtgaaaa agcgcgctgg aataccttcg acagcctgtg tctggtattc
     5461 agtgtggcga cattttttgt tgctcccgtg caaaacctgg cctggggcgg cgtatttaaa
     5521 ctgaaagata ctggctatcc ggtatttcgt tttgctaagg atgtcatcgt caataataac
     5581 gaggtgattg aagagcaaga acggatggca aaactttccg gaatgaaaga tacctggacg
     5641 gtcactgccg ttaagccgaa gtatcagacc tatgtggtgg tgatcggtga aagcgcgcgt
     5701 cgcgatgccc tcggtgcctt tggcggtcac tgggacaata ccccgtttgc cagcagcgtt
     5761 aacggtttga tatttgctga ctacattgcc gccagtggct ccacgcagaa atcgcttggc
     5821 ttaacgctca atcgcgtagt cgatggcaaa ccacagtttc aggataactt tgtcaccctg
     5881 gcaaatcgcg cgggcttcca gacctggtgg ttttccaacc agggccaaat cggcgaatac
     5941 gatactgcta tcgccagcat cgccaaacga gcagatgaag tgtacttcct gaaagaaggt
     6001 aattttgaag cagataaaaa taccaaagac gaagcgttac tggatatgac cgctcaagtg
     6061 ctggcgcaag agcactcgca accgcagctg attgttctac atctgatggg ctcacatccg
     6121 caggcctgcg acaggacaca aggcaaatac gaaacctttg tgcagtcgaa agaaacgtcg
     6181 tgctatctct ataccatgac gcaaacggac gatttactgc gcaagctgta cgatcagtta
     6241 cgcaacagcg gcagcagctt ctcgctggtt tacttttctg accacggtct ggcctttaaa
     6301 gagcgcggca aagacgtgca ataccttgcc catgatgata agtatcagca aaatttccag
     6361 gtgcctttta tggtcatttc cagcgacgat aaagcgcatc gggtgattaa agcccgccgc
     6421 tcagccaatg acttcttagg ttttttctcc cagtggacgg gaattaaagc gaaggaaatt
     6481 aacatcaaat acccgtttat atctgagaag aaagccgggt cgatatacat caccaacttc
     6541 cagttacaga aggtggatta caaccatctc ggaaccgata ttttcgaccc gaagccttaa
     6601 aaacaaaaat ccgccccgag aggcggattt tttatatcac caaagtgatt agaagcggta
     6661 accaacaccg gcaatccagg tgcctacgtc aacgctacga atacggctct gctcgtaaga
     6721 gaagtccaga gcaacgtttt ccatcgggtt gaactgcaga ccagcaccgt aggagaaacc
     6781 gtagtcgctg gtgtcgtgtt tgtaggtcgg gtattcagtg gtctggaatt taccataacc
     6841 cacacccact acaccgtaga tgcttgccca gtcgttaatg cggtaagccg gaccagcagt
     6901 gatgccgtag tactggtttt tgttgtagtc accagagctt gcagtacggc ttttctcggt
     6961 gtaagtgaaa gaaccgatca cacccagcgg gctgttgtct tcttcatagc ggtatttcag
     7021 gttgaaaccg cccattttgt tcatttggcc ctgagcgtcg ctctgtgcgt aaccgccagt
     7081 tacggtagaa gtcgcagcta cggaagtacc tgcggtgaaa gccagaactg cggccagtgc
     7141 tgaaagacat gcaatttttt tcataaccac ctcaaatgtg attcaaataa gtcctaagtt
     7201 ttaaatatat caaaaattaa tgggaaactc ttcgcgattt gtgatgtcta acgggccatt
     7261 tcatgtaaca gaacgtttcc atacaccgct atccatctaa atttaaatca ctttttcaga
     7321 gaactgcgta agtattacgc atgttttccc tgtcattcat ccagattatt cctaatcacc
     7381 agactaatga ttccatcaat cctggcgcat tttagtcaaa acgggggaaa attttttcaa
     7441 caaatgctca accagcattg ggtatatcca gtacactcca cgctttactt aagtctagat
     7501 atttgtggga gaaaggatgc ctggttcatt acgtaaaatg ccggtctggt taccaataat
     7561 catattgctc gttgccatgg cgtctattca gggtggagcc tcgttagcta agtcactttt
     7621 tcctctggtg ggcgcaccgg gtgtcactgc gctgcgtctg gcattaggaa cgctgatcct
     7681 catcgcgttc tttaagccat ggcgactgcg ctttgccaaa gagcaacggt taccgctgtt
     7741 gttttacggc gtttcgctgg gtgggatgaa ttatcttttt tatctttcta ttcagacagt
     7801 accgctgggt attgcggtgg cgctggagtt caccggacca ctggcggtgg cgctgttctc
     7861 ttctcgtcgc ccggtagatt tcgtctgggt tgtgctggcg gttcttggtc tgtggttcct
     7921 gctaccgctg gggcaagacg tttcccatgt cgatttaacc ggctgtgcgc tggcactggg
     7981 ggccggggct tgttgggcta tttacatttt aagtgggcaa cgcgcaggag cggaacatgg
     8041 ccctgcgacg gtggcaattg gttcgttgat tgcagcgtta attttcgtgc caattggagc
     8101 gcttcaggct ggtgaagcac tctggcactg gtcggttatt ccattgggtc tggctgtcgc
     8161 tattctctcg accgctctgc cttattcgct ggaaatgatt gccctcaccc gtttgccaac
     8221 acggacattt ggtacgctga tgagcatgga accggcgctg gctgccgttt ccgggatgat
     8281 tttcctcgga gaaacactga cacccataca gctgctggcg ctcggcgcta tcatcgccgc
     8341 ttcaatgggg tctacgctga cagtacgcaa agagagcaaa ataaaagaat tagacatta
//
LOCUS       DAPGWB010000178         8387 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.180, whole genome shotgun sequence.
ACCESSION   DAPGWB010000178 DAPGWB010000000
VERSION     DAPGWB010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8387
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.180"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(114..320)
                     /locus_tag="RHX79_004015"
     CDS             complement(114..320)
                     /locus_tag="RHX79_004015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfA family protein"
                     /protein_id="HDV2199130.1"
                     /translation="MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLH
                     RVWSKTSDKPVWMDQAEKATGDFY"
     gene            633..722
                     /gene="kdpF"
                     /locus_tag="RHX79_004016"
     CDS             633..722
                     /gene="kdpF"
                     /locus_tag="RHX79_004016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HDV2199131.1"
                     /translation="MSAGVITGVLLVFLLLGYLVYALINAEAF"
     gene            722..2395
                     /gene="kdpA"
                     /locus_tag="RHX79_004017"
     CDS             722..2395
                     /gene="kdpA"
                     /locus_tag="RHX79_004017"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706533.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HDV2199132.1"
                     /translation="MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTAGVER
                     ILFRLPGVSDHEMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLA
                     LNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSM
                     STLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFQPYQAVNTVEGAQQLLPMGP
                     VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVTGD
                     RRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGADSSINMEGKESRFGVLVSSL
                     FAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVF
                     IAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGP
                     HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV
                     SKKSQPASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS"
     gene            2418..4466
                     /gene="kdpB"
                     /locus_tag="RHX79_004018"
     CDS             2418..4466
                     /gene="kdpB"
                     /locus_tag="RHX79_004018"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HDV2199133.1"
                     /translation="MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSL
                     LTTCISIAMASGAMPGNALFSAAISGWLWVTVLFANFAEALAEGRSKAQANSLKGVKK
                     TAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITG
                     ESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNE
                     IALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGV
                     AGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLA
                     DAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRM
                     IRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK
                     GGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQA
                     EGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGK
                     QMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMRLHSPDSAILSAVIFN
                     ALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV
                     "
     gene            4475..5047
                     /gene="kdpC"
                     /locus_tag="RHX79_004019"
     CDS             4475..5047
                     /gene="kdpC"
                     /locus_tag="RHX79_004019"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HDV2199134.1"
                     /translation="MRGLRPALSTFIFLLLITGGVYPLLTTVLGQWWFPWQANGSLIR
                     EGDTVRGSALIGQNFTGNGYFHGRPSATAEMPYNPQASGGSNLAVSNPELDKLIAARV
                     AALRAANPDASASIPVELVTASASGLDNNITPQAAAWQIPRIAKARNLSVEQLTQLIA
                     KYSQQPLVKYIGQPVVNIVKLNLALDKLDE"
     gene            5040..7724
                     /gene="kdpD"
                     /locus_tag="RHX79_004020"
     CDS             5040..7724
                     /gene="kdpD"
                     /locus_tag="RHX79_004020"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     KdpD"
                     /protein_id="HDV2199135.1"
                     /translation="MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAE
                     AQRLRAQGLDIVVGVVETHGRKDTAAMLEGLAVLPPKRLAYRGRHISEFDLDAALARR
                     PALILMDELAHSNAPGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGI
                     QVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIAL
                     RELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASR
                     LGSVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYARE
                     HNLGKIILGRPASRRWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDSRSFK
                     DKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVV
                     ATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYR
                     EQRTRHLYEMSKALAVGRSPQDIAATSEQFIASTFHARSQVLLPDDNGKLQPLTHPQG
                     MTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMI
                     PEQQRLLETFTLLVANAFERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVL
                     FGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLT
                     LEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAE
                     IGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIV
                     DVHGGTITAFNRPEGGACFRVTLPQQTAPELEDFHEDM"
     gene            7721..>8387
                     /gene="kdpE"
                     /locus_tag="RHX79_004021"
     CDS             7721..>8387
                     /gene="kdpE"
                     /locus_tag="RHX79_004021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator KdpE"
                     /protein_id="HDV2199136.1"
                     /translation="MTNVLIVEDEQAIRRFLRTALEGDGMRVYEAETLQRGLLEAATR
                     KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKP
                     FGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLL
                     AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETG
                     IGYR"
BASE COUNT         1740 a         2184 c         2449 g         2014 t
ORIGIN      
        1 atatatgttt cgattggtat aacgatgtct aaatattcct ctgaacatct tcctgataca
       61 aaaaaccgcc agcgtttccg ctggcggttt tcaatgtatt caaaactcag caatcaataa
      121 aaatcaccag ttgccttttc ggcctgatcc atccacaccg gtttatcgct ggttttcgac
      181 cagacgcgat gcaggtagct gtaaaagcgg gcgcggtctt tccagaaaag catgaaaggc
      241 agcgccagaa cgcccgctgc aaccgcataa gtacggcgta aaaagataag ccatgcagga
      301 tattctctgt agagttccat acttttctcc cccttttgta tctacccggt gaatggcacc
      361 ggaaaaatga atttgtttat ctgatgaaaa tagtaccgcc ttttgtgtaa ttttactact
      421 catccgacca cttatttttg cttattgatg gtttatttac attcatcctg taattaagtt
      481 acacaaaagt taaattaata ctaaacatta gttaaatcat ggcttttgcc atttttatac
      541 tttttttaca ccccgcccgc agatttttgc gaaatctttg cagccagaat tctacccttc
      601 cggtatcact tttaggccac tggaggtgca ctgtgagtgc aggcgtgata accggcgtat
      661 tgctggtgtt tttattactg ggttatctgg tttatgccct gatcaatgcg gaggcgttct
      721 gatggctgcg caagggttct tactgatcgc cacgttttta ctggtgttaa tggtgctggc
      781 gcgtccttta ggcagcgggc tggcgcggct gattaatgac attcctcttc caggtacagc
      841 gggcgttgaa cgtatactct ttcgtttacc tggcgtctct gaccatgaga tgaactggaa
      901 gcaatatctt tgtgccattc tcggcctgaa catgctgggg ctggcggtgc tgttttttat
      961 gttgctcggt cagcactatc tgccgcttaa tccacagcag ttgccggggc tgtcgtggga
     1021 tctggcgctg aataccgccg tcagctttgt cacgaatacc aactggcaat cttacagcgg
     1081 tgaaaccacg ttgagctatt tcagccagat ggctggctta acggtgcaaa actttctttc
     1141 tgccgccagc gggattgcgg tgatttttgc cctcatccgt gcgtttaccc gccagagcat
     1201 gagcacactc gggaatgcct gggtcgatct gctacgcatc acgttatggg tgctcgtccc
     1261 tgtggcgttg ttgatcgcac tgttttttat tcaacaaggt gcgctgcaaa actttcagcc
     1321 ttatcaggct gtgaataccg ttgaaggagc gcaacagctg ttacccatgg ggcctgtagc
     1381 ttctcaggaa gcgatcaaga tgctcggtac taacggcggt ggcttcttta atgccaactc
     1441 gtcgcatccg tttgaaaacc caaccgcact gaccaacttc gtgcagatgc tggcgatctt
     1501 cttgatccca acggcgctgt gctttgcctt tggtgaagtg acgggcgatc gccgccaggg
     1561 gcgcatgttg ctgtgggcga tgtcagtgat ttttgtcatc tgcgtaggcg tggtgatgtg
     1621 ggcagaagtt cagggtaatc ctcatctgct ggcgctcggc gcagacagca gcatcaatat
     1681 ggaaggtaaa gagagccgtt tcggcgtgct ggtcagtagc ctgtttgcgg tcgtgactac
     1741 ggcggcttcc tgtggcgcgg tgattgcgat gcatgattcg tttaccgctc tcggtggcat
     1801 ggtgccgatg tggctgatgc aaattggtga agtggtgttc ggcggtgtcg gttctggtct
     1861 ttacggcatg atgctgtttg tcctgctggc ggtgtttatt gccgggctga tgattggtcg
     1921 tacaccggaa tatctgggta aaaaaatcga cgtacgcgag atgaaactga ctgcactggc
     1981 gattctggtt accccgacgc tggtgctgat gggcgcggcg ctggcaatga tgaccgacgc
     2041 cggacgtagc gccatgctca accctggccc gcatggtttt agcgaagtgc tgtacgccgt
     2101 gtcatccgcc gctaacaaca acggcagcgc ctttgccgga ttaagcgcca actccccgtt
     2161 ctggaactgt ttactggcgt tctgcatgtt tgtcggtcgc ttcggggtga ttatcccggt
     2221 gatggcaatt gccggttcgc tggtgagtaa aaagagccaa cccgccagct ccggcacgct
     2281 gccaacgcac ggcccgctgt ttgttggcct gttaatcggc accgtgttgc tggttggcgc
     2341 actgaccttt atccctgccc tggcgcttgg tccggtggcg gaatatctct cctgatgata
     2401 ttgagtgagc actgaatatg agtcgtaaac aactggcgct attcgaacca acacttgtcg
     2461 ttcaggcgct gaaagaagcg gtgaaaaaat taaacccgca ggcgcaatgg cgcaatccgg
     2521 tgatgtttat cgtctggatc ggcagtctgc tgaccacctg tattagcatc gcgatggcaa
     2581 gcggtgcgat gcctggcaat gcgctgttta gcgcggcaat tagcggctgg ctgtgggtca
     2641 ccgtactgtt cgctaatttc gccgaggcgc tggcagaagg ccgcagtaaa gcgcaggcca
     2701 acagtcttaa aggggtgaaa aaaactgcct ttgcccgcaa gctgcgtgag ccgaaatatg
     2761 gcgctgcggc ggacaaagtt cctgccgatc aactgcgtaa aggtgacatc gtgctggtag
     2821 aagctggcga tattatcccc tgcgatggtg aagtcattga aggcggcgca tcggtcgatg
     2881 aaagcgccat caccggggaa tcggcaccgg tgatccgtga atccggcggc gattttgcct
     2941 ccgtcaccgg cggcacgcgt attctttctg actggctggt gattgagtgt agcgttaacc
     3001 ccggtgagac atttctggat cggatgatcg cgatggtgga aggcgcacag cgacgcaaaa
     3061 caccgaacga gattgccctg actatcctgc tgattgctct gaccatcgtc tttttactgg
     3121 caaccgccac gctgtggccg ttttccgcgt ggggcggtaa tgccgtgagt gtaacggtac
     3181 tggtggcgct gctggtctgt ctgatcccaa ccactattgg cggcctgttg tcagcgatcg
     3241 gcgtcgccgg gatgagtcgg atgctgggcg cgaatgtgat tgccaccagc ggacgtgcag
     3301 ttgaagcggc aggtgacgtt gacgttctgc tactggataa aaccggcacc atcacactcg
     3361 gtaaccgtca ggcgtcggag tttatccctg cgcagggcgt ggatgaaaaa acgctggctg
     3421 acgccgcaca actggcttcg ctggctgatg aaacgccgga aggccgcagt attgtgatcc
     3481 tcgccaagca acgttttaac ctgcgcgagc gcgatgtgca gtcgctccat gccacctttg
     3541 taccgtttac tgcgcaaagc cggatgagcg ggatcaacat cgacaaccgc atgatccgta
     3601 aaggttctgt cgatgccatt cgccgccatg ttgaggctaa cggcggtcac ttccctaccg
     3661 atgttgatca aaaagtcgat caggttgcgc gtcagggggc cacgccgctg gtggtggtgg
     3721 aaggttcccg tgtgctgggc gttattgcgc tgaaagatat cgtcaaaggc ggtattaaag
     3781 agcgcttcgc ccagctgcgc aaaatgggca ttaaaacggt gatgattacc ggcgataacc
     3841 gtctgactgc cgccgccatt gctgcggaag cgggcgtcga tgattttctc gccgaagcga
     3901 caccggaggc caagctggca ttgattcgtc agtatcaggc ggaaggccgt ttggtggcga
     3961 tgaccggcga cggcaccaac gatgctccag cgctggcgca ggcagatgtc gcggtggcga
     4021 tgaactccgg tactcaggcg gcgaaagaag cgggcaatat ggtcgatctc gactctaacc
     4081 cgaccaagtt gatcgaggtg gtacatattg gcaaacagat gctgatgacc cgtggctcgc
     4141 tgaccacctt cagcattgcc aacgatgtgg cgaaatactt cgccattatt ccggcggcgt
     4201 tcgcggcaac gtatccgcag ttaaatgcgc tgaacatcat gcgccttcat tcgcccgact
     4261 ccgccattct cagtgcggtc attttcaacg ccttgattat cgtctttttg attcctctgg
     4321 cgttaaaagg cgtgagttat aaaccgctta ccgcttctgc catgttgcgc cgtaacttat
     4381 ggatttacgg tctgggtggg ctgctggtgc cgtttattgg tatcaaagtc attgatttac
     4441 tgctgaccgt ttgcggtctg gtgtgaggtt taccatgcgt ggattacgtc cggcattatc
     4501 gacatttatc tttctgttat tgattactgg cggcgtttac ccgctgctga ccaccgtgct
     4561 ggggcaatgg tggtttccct ggcaggccaa cggttcgttg atccgtgaag gtgatacagt
     4621 gcggggttcg gcattaatcg ggcagaattt taccggcaac ggctattttc atggtcgccc
     4681 gtcggcaacg gcagaaatgc cctataatcc acaggcttct ggcgggagca atctggcggt
     4741 cagtaaccct gagctggata aactaatagc cgcacgcgtt gctgcattac gggccgctaa
     4801 cccggatgcc agcgcgagca ttccggttga actggtgacg gcatcggcaa gcgggctgga
     4861 caataatatc accccgcaag cggcggcctg gcagatccca cgcatcgcga aagcgcgtaa
     4921 tctcagcgtt gaacagctca cgcaactgat cgcaaaatac agccaacaac cactggtgaa
     4981 atatatcggc cagccggtcg tcaacattgt caaactcaat ctggcgctgg ataaacttga
     5041 tgaataacga acccttacgt cccgaccccg atcgtctgct ggaacaaact gccgcgccgc
     5101 atcgggggaa gctgaaagtt ttcttcggtg cctgcgcagg cgtcgggaag acctgggcga
     5161 tgctggcaga agcccagcga ctgcgggcgc aagggctgga tattgtggtt ggcgtggtag
     5221 aaacccacgg gcggaaagat accgccgcca tgctggaagg gctggctgtt ctgccgccaa
     5281 aacgcctggc gtaccgtggg cggcatatca gcgagtttga tctcgatgcc gccctcgccc
     5341 gccgtccggc gctgatctta atggacgaac tggcgcacag taatgcgcct ggttctcgtc
     5401 atcccaaacg ctggcaggat attgaagagc tgctggaagc aggcattgat gtttttacta
     5461 ccgtcaacgt tcaacatctg gaaagcctga atgatgtggt cagcggcgtc accggaattc
     5521 aggtacggga aaccgtgccc gatccttttt tcgatgccgc cgacgacgta gtgctggtgg
     5581 acttgccccc ggacgatctg cgccagcggc tgaaagaagg caaagtctat attgccgggc
     5641 aggcggagcg cgccattgaa cattttttcc gcaaaggcaa tctgatcgcc ctgcgtgaac
     5701 tggcactgcg ccgtactgcc gatcgcgtag atgagcaaat gcgcgcctgg cgggggcatc
     5761 ctggtgaaga gaaagtgtgg cacacgcgcg acgcgatcct tttatgcatc gggcataaca
     5821 ccggcagtga gaaactggtc cgcgcggcgg cgcggttggc ctcgcgcctg ggtagcgtct
     5881 ggcacgcggt gtatgttgaa acccctgccc tgcatcgctt accggaaaaa aaacgtcggg
     5941 caattctcag cgccttacgt ctggcgcagg agctgggcgc ggagacggct acactttctg
     6001 atccagcgga agaaaaagca gtagtgcgtt atgcccgtga acataatctc ggcaagatta
     6061 ttctcggtcg cccggcctcg cgccgctggt ggcgtcggga aacgtttgct gaccgactgg
     6121 cgcgcatcgc ccccgatctc gatcaggtgc tggtcgcgct tgatgaacca cccgcccgca
     6181 cgattaacaa cgcgccggat agccgctctt ttaaagacaa gtggcgggta cagattcagg
     6241 gatgcgtggt tgccgccgcg ttatgcgccg ttatcacttt aattgccatg cagtggctga
     6301 tggcgtttga tgccgccaac ctggtgatgc tgtatctgct tggcgtggtg gtggtggcgc
     6361 tattttatgg acgctggcct tcggtggttg ctaccgtcat taatgtggtg agtttcgatc
     6421 tcttttttat cgccccacgc ggcacgctcg ctgtctctga tgtgcaatat ctgctgacct
     6481 tcgcggtgat gttaaccgtc gggctggtga tcgggaacct tactgcgggt gtgcgttatc
     6541 aggcgcgggt agcccgttac cgcgagcaac gcacacggca cttatatgaa atgtcgaaag
     6601 ctctggcggt gggccgcagt ccgcaggaca tcgccgccac cagcgaacaa tttattgcct
     6661 ccacgtttca tgcccgcagt caggtgttgt tgcccgatga caacggtaaa ttgcagccgt
     6721 taacacatcc gcaaggaatg acgccatggg acgatgccat cgcgcagtgg agttttgata
     6781 aaggcctgcc tgcgggtgcg ggcaccgaca cgttacccgg cgtgccgtac cagattttgc
     6841 cgctaaaaag cggcgagaaa acctacggac tggtggtggt ggaaccgggg aatctgcgtc
     6901 agttgatgat cccggagcag cagcgcctgc tagagacgtt tacgctgtta gtcgccaatg
     6961 cgtttgagcg gctgacgctg accgccagtg aagaacaggc gcggatggca agcgaacgtg
     7021 aacagatccg caacgccctg ctggcggcgc tttcgcatga tttacgcacg ccgcttacgg
     7081 tgctgtttgg tcaggcagaa atcttaacgc tcgatctggc aagcgaagga tcgccccacg
     7141 cccgccaggc cagcgagatt cgtcagcatg tgctgaacac tacccgactg gtgaataatc
     7201 tactggatat ggcgcgaatt cagtccggcg gctttaattt gaagaaagag tggttaacgc
     7261 tggaagaagt agtcggcagc gcgctgcaaa tgctggaacc gggtttatcg tcgcccatca
     7321 atctttctct gccagaaccg ctgaccttaa tccacgttga cgggccactc tttgaacggg
     7381 tgctgattaa tctgctggag aacgcggtga aatatgcggg tgcgcaggcc gaaattggta
     7441 tcgatgccca cgttgagggc gaaaatctac aactggatgt ctgggataac ggccccggtc
     7501 ttccgccagg ccaggagcag acgatatttg ataagtttgc tcgcgggaat aaagagtcgg
     7561 cagtaccggg ggtagggctt ggactggcaa tttgtcgggc gatagtggat gtacacgggg
     7621 gcactattac cgcgttcaac cgaccggaag gtggtgcctg ttttcgtgtt acacttcccc
     7681 agcaaaccgc tcctgaactt gaagactttc atgaggatat gtgacaaacg ttctgattgt
     7741 tgaagatgaa caggctattc gtcgctttct gcgcacggcg ctggagggcg acgggatgcg
     7801 cgtctatgag gccgaaacgc tgcaacgcgg cttgctggaa gcggctaccc gtaagccaga
     7861 tttgattatt ctcgatctcg gcctgcccga tggtgatggg attgagttta tccgcgacct
     7921 gcgccagtgg agcgcggtgc cggtgattgt gctttccgca cgcagcgaag agagcgacaa
     7981 gatcgccgcg ctggatgccg gagcggatga ttatctgagt aagccgtttg gcattggcga
     8041 attgcaggcc cgtctgcgcg tcgctttacg ccgccactcc gccaccgccg cgcccgatcc
     8101 gctggtgaaa ttttccgatg ttaccgtcga tttagccgcc cgcgtgattc accggggtga
     8161 ggaagaggtg catctcacgc cgattgagtt ccgcctgctg gcggtgctgc tgaataatgc
     8221 cgggaaagtg ctcacccagc gccagttact caatcaggtg tgggggccaa acgcggtcga
     8281 acacagtcac tatttgcgta tttatatggg acatctgcga caaaaactgg aacaggatcc
     8341 cgctcgcccc cgccatttca ttactgaaac cggtattggg tatcggt
//
LOCUS       DAPGWB010000179         8377 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.181, whole genome shotgun sequence.
ACCESSION   DAPGWB010000179 DAPGWB010000000
VERSION     DAPGWB010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8377
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.181"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..205
                     /locus_tag="RHX79_004022"
     CDS             <1..205
                     /locus_tag="RHX79_004022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000420980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HDV2199137.1"
                     /translation="RLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLR
                     RKMRKAAMDRNYLASVLAGSGLS"
     gene            474..2711
                     /gene="nrfB"
                     /locus_tag="RHX79_004023"
     CDS             474..2711
                     /gene="nrfB"
                     /locus_tag="RHX79_004023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage adsorption protein NrfB"
                     /protein_id="HDV2199138.1"
                     /translation="MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRR
                     IKRKLSVYRRYPRMSYRELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHI
                     FVGTYPNDPDTQRDVDEVCARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANF
                     AFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSEL
                     HGKDVPVREALAGQVPSAGVGTCFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKE
                     KGMTEIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSTAVRQKSRWIIGI
                     VFQGFKTHKWTSSLTLNYFLWRDRKGAISNFVSFLAMLVMLQLLLLLAYESLWPNAWH
                     FLSIFSGSAWLMTLLWLNFGLMVNRIVQRVIFVTGYYGLTQGLLSVLRLFWGNLINFM
                     ANWRALKQVLQHGDPRRVAWDKTTHDFPSVTGDTRSLRPLGQILLENQVITEEQLDTA
                     LRNRVEGLRLGGSMLMQGLISAEQLAQALAEQNGVAWESIDAWQIPSSLIAEMPASVA
                     LHYAVLPLRLENDELIVGSEDGIDPVSLAALTRKVGRKVRYVIVLRGQIVTGLRHWYA
                     RRRGHDPRAMLYNAVQHQWLTEQQTGEIWRQYVPHQFLFAEILTTLGHINRSAINVLL
                     LRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVSMQSLLLKAGLNTEQVAQLES
                     ENEGE"
     gene            2698..5670
                     /gene="nfrA"
                     /locus_tag="RHX79_004024"
     CDS             2698..5670
                     /gene="nfrA"
                     /locus_tag="RHX79_004024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriophage adsorption protein NfrA"
                     /protein_id="HDV2199139.1"
                     /translation="MKENNLNRVIGWSGLLLTSLLSTSALADNIGTSAEELGLSDYRH
                     FVIYPRLDKALKAQKNNDEATAIREFEYIHQQVPDNIPLTLYLAEAYRHFGHDDRARL
                     LLEDQLKRHPGDARLERSLAAIPVEVKSVTTVEELLAQQKACDAAPTLRCRSEVGQNA
                     LRLAQLPVARAQLNDATFAASPEGKTLRTDLLQRAIYLKQWSQADTLYNEARQQNTLS
                     AAERRQWFDVLLAGQLDDRILALQSQGIFTDPQSYITYATALAYRGEKARLQHYLNEN
                     KPLFTTDAQEKSWLYLLSKYSANPVQALANYTVQFADNRQYVVGATLPVLLKEGQYDA
                     AQKLLATLPANEMLEERYAVSVATRNKAESLRLARLLYQQEPANLTRLDQLTWQLMQN
                     EQSREAADLLLQRYPFQGDARVSQTLMARLASLLESHPYLATPAKVAILSKPLPLAEQ
                     RQWQSQLPGIADNCPAIVRLLGDMSPSYDAAAWNRLAKCYRDTLPGVALYAWLQAEQR
                     QPNAWQHRAVAYQAYQVEDYATALAAWQKISLHDMSNEDLLAAANTAQAAGNGAARDR
                     WLQQAEQRGLGNNALYWWLHAQRYIPGQPELALSDLTRSINIAPSANAYVARATIYRQ
                     RHNVPAAVSDLRAALELEPNNSNIQAALGYALWDSGDIAQSREMLEQAHKGLPDDPAL
                     IRQLAYVNQRLDDMPATQHYARLVIDDIDNQALITPLTPEQNQQRFNFRRLHEEVGRR
                     WTFSFDSSIGLRSGAMSTANNNVGGAAPGKSYRSYGQLEAEYRIGRNMLLEGDLLSVY
                     SRVFADTGENGVMMPVKNPMSGTGLRWKPLRDQIFFLAVEQQLPLNGQNGASDTMLRA
                     SASFFNGGKYSDEWHPNGSGWFAQNLYLDAAQYIRQDIQAWTADYRVSWHQKVANGQT
                     IEPYAHVQDNGYRDKGTQGAQLGGVGVRWNIWTGETHYDAWPHKVSLGVEYQHTFKAI
                     NQRNGERNNAFLTIGVHW"
     gene            5671..6561
                     /locus_tag="RHX79_004025"
     CDS             5671..6561
                     /locus_tag="RHX79_004025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4434 family protein"
                     /protein_id="HDV2199140.1"
                     /translation="MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLM
                     SQLRLQGFDTLVLQWTRYGDAFTQPEQRALLFKRAAAAQQAGLKLIVGLNADPEFFMH
                     QKQSSAALESYLNRLLAADLQQARLWSAAPGVTPDGWYISAEIDDLNWRSEAARQPLL
                     TWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEQVKATGVNVWVQDGSGVDKL
                     TAEQRERYLQASADCQSPAPASGIVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCG
                     KDTLYFSLRYLPVAHGILEY"
     gene            6744..7505
                     /gene="envY"
                     /locus_tag="RHX79_004026"
     CDS             6744..7505
                     /gene="envY"
                     /locus_tag="RHX79_004026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator EnvY"
                     /protein_id="HDV2199141.1"
                     /translation="MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNV
                     IELSTLNHVLIPHINRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAA
                     NHSKQQPSKPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSICRIIQSDIQ
                     HYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQ
                     LCGYSSTSYFISVFKAFYGLTPLNYLAKQRQKVMW"
     gene            complement(7551..7627)
                     /locus_tag="RHX79_004027"
     tRNA            complement(7551..7627)
                     /locus_tag="RHX79_004027"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7591..7593),aa:Arg,seq:tct)
     gene            7870..>8377
                     /gene="fimZ"
                     /locus_tag="RHX79_004028"
     CDS             7870..>8377
                     /gene="fimZ"
                     /locus_tag="RHX79_004028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria biosynthesis transcriptional regulator
                     FimZ"
                     /protein_id="HDV2199142.1"
                     /translation="MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDY
                     LRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANG
                     FVSKCNDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTITVLSNREVTILRY
                     LVSGLSNKE"
BASE COUNT         2104 a         2154 c         2132 g         1987 t
ORIGIN      
        1 gcgtctggac gtggtaatga atgaagacga ctgcaaaata agaagaggaa atgcagcaga
       61 attattttca gggatacggc acatcgctat taatattttg acgaatgata aggtattcaa
      121 ggcagggtta agacgtaaga tgcgaaaagc agccatggac agaaactatc tcgcgtcagt
      181 ccttgcgggg agcgggcttt cgtaatcttg ccctgcctgc tcacctcctc caggcacttc
      241 cactacatta tgacctgctc ggtgccaccg ctccttttca ctatgacgtt aacctcccct
      301 ccttgacacc atgcttttgt ctacattcta cgcaaacggc aacttttata accagtgtaa
      361 aaataacgtg ccgcaatagt catacctatt aatggtaaaa agctgtcaca attcataaaa
      421 aaccttaata tacgccaccc taaacataac cagcgttaat gtaaggtttt tgtgtggact
      481 ggcttcttga tgtttttgca acctggctct acggcttaaa agtaatcgcg ataacgttag
      541 cggtcatcat gttcatcagc gggctggacg atttttttat tgatgtcgtc tactgggtac
      601 gccgcattaa acgcaagttg agtgtttatc gccgctaccc gcgaatgagt taccgcgaac
      661 tgtataaacc agatgaaaaa ccgttagcga ttatggttcc ggcgtggaat gaaacgggcg
      721 tcatcggcaa tatggccgag ctggcggcga ccacgctcga ctacgaaaac tatcatatct
      781 ttgttggcac ctaccccaac gaccccgata ctcaacgtga tgttgacgaa gtgtgcgctc
      841 gctttccgaa cgtgcataag gtagtctgcg cgcgtcctgg tcccaccagc aaagccgact
      901 gtctgaacaa cgtgctggac gccatcaccc agtttgaacg tagcgccaat ttcgcttttg
      961 ctggttttat tctgcatgac gccgaagatg tgatttcacc gatggaattg cgtctgttca
     1021 actatctggt cgagcgtaaa gatctgattc agatcccggt gtatccgttc gaacgcgaat
     1081 ggacgcactt caccagcatg acttacattg atgagttttc agagctgcat ggcaaagatg
     1141 ttccggtgcg tgaagccctc gccggacaag tgcccagcgc aggcgtcggc acctgtttca
     1201 gccgccgcgc cgtgaccgct ctgttagctg acggtgacgg tattgctttc gacgtgcaga
     1261 gtctgactga agattacgac attggtttcc gcctgaaaga gaaaggtatg acggaaattt
     1321 ttgtccgttt tccggtggtg gacgaagcca aagaacgcga gcagcgcaaa tttttacagc
     1381 acgcacggac gtcaaacatg atctgcgtgc gcgaatattt ccccgatacc ttttcgactg
     1441 cagttcgaca aaaatctcgc tggatcatcg gcattgtttt ccagggcttt aaaacccaca
     1501 aatggacctc cagcctgacg ctgaactact ttctctggcg cgaccgcaaa ggggcaatca
     1561 gtaactttgt cagcttcctc gcgatgctgg tgatgctcca gcttttgctg ttgctggcgt
     1621 atgaaagttt gtggcccaat gcctggcatt tcctttctat ttttagcggc agcgcatggt
     1681 taatgaccct gctgtggcta aactttggct tgatggttaa ccgcatcgtg cagcgggtga
     1741 ttttcgtcac tggctactac ggtctgacgc aggggctgct atctgtcctg cgtcttttct
     1801 ggggcaacct gattaacttc atggccaact ggcgcgcgct aaaacaggta cttcaacacg
     1861 gcgatccacg tcgcgtcgcg tgggataaaa caacgcatga cttccccagc gtgactggcg
     1921 atacccgctc gttgcgcccg ttaggccaaa ttctgctgga aaatcaggtc atcactgaag
     1981 aacaactcga tacagcactg cgtaatcgcg tcgaaggtct acgcctgggc ggttcaatgc
     2041 tgatgcaggg gctgattagc gccgagcagc tggcacaggc gctggcagag caaaacggcg
     2101 tggcgtggga atccatcgat gcctggcaga tcccgtcctc gctgattgcc gaaatgccag
     2161 cctccgtagc gctgcattat gcagtactgc cgctgcgtct ggaaaatgat gagttaattg
     2221 tcggcagtga agatggtatt gacccggttt cgctggcggc cctgacgcgt aaagtcggac
     2281 gcaaagtgcg ttacgtcatt gttctgcggg gacaaattgt cacggggtta cgtcactggt
     2341 atgcacgccg acgcggtcac gatccgcggg caatgttgta caatgcggtt cagcatcagt
     2401 ggctcacgga acagcagacc ggtgaaatct ggcggcaata tgtgccgcat cagttcctgt
     2461 tcgccgaaat actgaccacg ctcggtcata ttaatcgttc agcaattaac gtgttgttat
     2521 tgcgccatga acgcagttct ctgccgctcg gcaagttttt ggtcaccgaa ggcgttatca
     2581 gccaggaaac gttggatcgc gtcctgacaa ttcaacgcga attacaagtt tcgatgcaat
     2641 cactattact caaagcaggt ttaaacacag aacaggttgc gcaactggag tccgaaaatg
     2701 aaggagaata accttaatcg cgtcatcgga tggtctggtt tactgctgac gtctttattg
     2761 agtaccagcg cactcgcaga caatatcggc accagcgcag aagagctggg gctgagcgat
     2821 tatcgccatt ttgttattta tccccgtctc gataaggcgc tgaaggcaca gaaaaataac
     2881 gacgaagcaa ccgccatccg cgaatttgaa tatatacacc agcaggtgcc ggataatatt
     2941 ccgctgactt tataccttgc ggaagcctat cgccattttg gtcatgatga ccgggcgcgg
     3001 ctgttgcttg aggatcaact gaaacgtcac ccaggagatg cccgacttga gcgcagtctg
     3061 gcggctattc cggttgaagt gaaaagcgtt acgactgttg aagaactgct tgcccagcaa
     3121 aaagcgtgcg acgctgcgcc gaccctgcgt tgtcgcagtg aagtcgggca gaatgccctg
     3181 cggctggcac aattacctgt cgccagagcg caactgaacg atgcgacgtt tgctgcatcg
     3241 ccagaaggaa aaacgctgcg aaccgatctg ctgcaacggg caatctacct gaaacaatgg
     3301 tcccaggcag atacgctata caatgaagca cgccagcaga acacattaag cgcggcagaa
     3361 cgccgtcagt ggtttgacgt gcttcttgcc gggcagctgg acgatcggat cctggcactg
     3421 caatcacagg ggatcttcac cgatcctcag tcatatatta cttacgcgac cgcgctggct
     3481 tatcgtggcg aaaaagcacg cctccagcat tatctcaatg aaaataagcc gctgtttacc
     3541 acggacgcac aagagaaaag ttggctctat ctgttatcta aatacagcgc caaccccgtt
     3601 caggcattgg cgaattatac ggtgcagttt gccgataacc gccagtatgt tgttggcgcg
     3661 acgctaccgg tgctgttaaa agaaggtcag tacgacgcag cgcaaaaact gctcgccacc
     3721 ctccccgcca atgaaatgct tgaggagcgt tatgctgtca gcgtggcgac ccgtaacaag
     3781 gctgaatctc tgcgtctggc acgattgctg tatcagcaag aaccggcaaa tcttacccgc
     3841 ctggatcaac tgacctggca actgatgcag aacgagcagt cacgcgaagc tgccgattta
     3901 ttgctgcaac gctatccttt ccagggcgat gcgcgtgtca gccagacttt aatggcgcga
     3961 ctggcgtctc tgctggaaag tcatccttac ctggcaacgc cggcaaaggt ggcgatttta
     4021 tcgaaaccct taccgctggc ggagcaacgt cagtggcaaa gtcagttgcc gggtattgca
     4081 gataattgcc cggcaatagt tcgcttgctg ggcgatatgt cgccttccta cgatgctgcc
     4141 gcctggaacc gtctggcaaa gtgttatcgg gacacgctac ccggtgtggc gctgtatgca
     4201 tggcttcagg ccgaacaacg acaaccgaac gcctggcaac atcgtgcggt agcctatcag
     4261 gcgtatcagg ttgaggacta cgccaccgca ctggcggcct ggcagaaaat cagtcttcac
     4321 gacatgagca atgaggatct gcttgctgct gccaataccg cccaggcggc aggaaatggt
     4381 gcagctcgcg atcgctggct acaacaggca gaacaacgtg gactgggaaa caatgccctc
     4441 tactggtggc tgcatgcgca acgttacatt cctggtcagc cggaactcgc actgagcgat
     4501 ctcacgcgct caatcaatat tgcgccttct gccaacgctt acgttgcgcg ggcgacaatt
     4561 tatcgccaac gtcataatgt cccggcggcg gtgagtgatt tgcgcgccgc gctggaactg
     4621 gaaccgaata atagcaacat ccaggcagcg cttggttacg ccttgtggga tagcggtgat
     4681 atcgcacagt cgcgggaaat gctcgaacag gcgcataaag ggcttccgga cgatccggca
     4741 ctgatccgac aactggccta cgtgaaccag cgtctggatg acatgcctgc gacgcagcac
     4801 tacgcccggc tggtgattga tgacattgat aatcaggcgc tgataacccc actgacccca
     4861 gagcaaaatc agcaacgctt caatttccgc cgtttgcatg aggaggtcgg tcgccgctgg
     4921 acgttcagtt tcgattcttc tatcggcttg cgttccgggg caatgagcac cgctaacaat
     4981 aatgtcggcg gcgcagcgcc agggaaaagc tatcgtagct acgggcaact ggaagccgag
     5041 taccgcatcg gacgcaatat gctgctggaa ggcgacctgc tctcagttta tagccgcgtc
     5101 tttgccgata ccggagaaaa cggggtgatg atgccggtga aaaatccgat gtccggcacc
     5161 ggtctgcgct ggaagccgct gcgcgatcag atctttttcc tcgccgtcga acagcagttg
     5221 ccgctgaacg ggcaaaatgg cgcatccgat accatgctgc gcgccagcgc ctcattcttt
     5281 aatggcggca aatacagcga cgaatggcac ccgaacggtt caggctggtt tgcccaaaac
     5341 ctgtacctcg atgcggcgca atatatccgc caggatattc aggcgtggac ggcagattat
     5401 cgcgtcagct ggcatcagaa ggtagctaac ggacagacta ttgagcctta cgctcacgtt
     5461 caggacaacg gctatcgtga taaaggcact cagggcgcgc agcttggcgg agtcggggtc
     5521 cgctggaata tctggaccgg cgagacgcac tacgacgcct ggccgcacaa agtcagtctc
     5581 ggcgtcgagt atcaacatac ctttaaggcg attaatcaac gtaacggaga gcgcaacaac
     5641 gcgtttctca ccattggagt gcactggtaa atgcgtaagt tcattttcgt attgctgaca
     5701 ctgcttttgg tcagcccttt ttcctttgcg atgaaaggta ttatctggca accacaaaac
     5761 cgagatagtc aggttaccga tacccagtgg caggggctga tgagtcagtt acgtttgcaa
     5821 ggcttcgata ccctggtttt gcaatggacc cgttacggcg atgcattcac ccagccagaa
     5881 cagcgcgcgt tattgtttaa gcgtgccgca gctgcgcaac aggctggcct gaagctgatt
     5941 gtcgggctga acgccgatcc ggaatttttt atgcaccaga aacagtcgtc cgcagcgctg
     6001 gaaagctatc ttaatcgcct gctggctgcc gatctccagc aagccagatt atggagcgcc
     6061 gcgcctggcg taacgccgga tggctggtac atcagcgcgg aaattgacga cctgaactgg
     6121 cgcagcgaag ctgcccgtca gcctttgcta acatggttaa acaacgcgca gcggctgatt
     6181 agcgatgttt cagcaaaacc ggtttatatc agtagttttt tcgccggaaa catgtcgccc
     6241 gatggctatc gccaactgct ggaacaagtt aaagcaactg gcgttaatgt ctgggtacag
     6301 gatggcagcg gcgtggataa acttaccgct gaacagcgtg aacgttatct acaggccagc
     6361 gccgattgcc aaagtcccgc ccctgccagc ggcattgttt atgaactgtt tgtcgccggc
     6421 aaaggcaaaa cctttacagc gaaaccgaaa ccggatgcag agatcgcctc gctgttagcg
     6481 aaacgttcct cttgcggtaa agacactctc tatttctctc tgcgctattt gcccgtcgcg
     6541 cacggcattc tcgagtatta aatctcctcc aggtaagtcg ggtacgacct ggcttacctc
     6601 tttcgctctc gtcagaattc catcaagatt aattgctaaa aagcgtgcta aagaaagaag
     6661 atcgttatcg gcgaacgggc cgatcactca tgcaggaagc atagatcctt tgagcggagt
     6721 ttctgatatc tgaggagtgc gaaatgcaat tgagcagcag tgaaccttgc gtggtgatcc
     6781 tgaccgaaaa agaggtagag gtaagcgtca ataaccatgc tacgtttacc cttccgaaaa
     6841 actacctggc cgccttcgcg tgcaacaata acgtcattga actctcaacg ttaaatcacg
     6901 tattaatccc ccacatcaac cgtaacatca tcaacgatta tctgttgttt ttaaataaga
     6961 acttaacctg tgtaaagccc tggtcgcggc tggcaacccc ggttatcgct tgtcatagcc
     7021 gtacaccgga agtgttccgg ctagccgcca accacagcaa gcagcaaccc agcaaaccct
     7081 gcgaagcgga gttgacgcgc gcattacttt ttaccgtatt gtctaacttt cttgagcaat
     7141 cgcggtttat agccctactg atgtatatct tacgcagcag cgtccgcgac agcatctgcc
     7201 gcattattca aagcgatatt cagcattact ggaatctgcg aattgtcgcc agttcgctat
     7261 gtttaagccc cagcctactc aaaaagaaat taaaaaacga aaataccagc tatagccaga
     7321 ttgtcacaga gtgtcgtatg cgttacgccg tacagatgtt attgatggat aacaaaaata
     7381 tcactcaggt ggcgcaatta tgtggctata gcagcacgtc gtactttatc tctgttttta
     7441 aggcgtttta cggcctgaca ccgttgaatt atctcgccaa acagcgacaa aaagtgatgt
     7501 ggtgaagggc aaagcggaaa cggataagac gggcataaat gaagaagaaa tggcgcgccc
     7561 tgcaggattc gaacctgcgg cccacgactt agaaggtcgt tgctctatcc aactgagcta
     7621 agggcgcgtt gataccgcaa tgcggtgtaa tcgcgtgaat tatacggtca acccttgctg
     7681 agtcaatggc ttttgatctg gttgctgaac aagtgaacga ccgcgtctga ttttctgatt
     7741 tatttcgcta tagcggcaaa caaacacaca ccgctgcgcg tctaaatcaa gaaaacccgt
     7801 attttcatgt atcaaagtac aatttaccgc cctaacggaa aattgtccgc tcctatgaga
     7861 ctggtaacta tgaaaccaac gtcggtgatc attatggata ctcatcctat catcagaatg
     7921 tctattgaag ttctgttgca aaaaaacagt gaattgcaga ttgtcctgaa aacggatgat
     7981 taccgcataa ccatcgatta tctccgaacc cgtcctgttg atttaatcat tatggatata
     8041 gacttgcccg gaacagacgg ttttaccttc ctgaaaagga tcaaacaaat ccagagcaca
     8101 gtgaaagtgt tatttttatc atcgaaatca gaatgctttt atgctggcag agcgatacaa
     8161 gctggtgcta acggttttgt cagtaaatgc aatgatcaga atgatatttt tcatgccgtt
     8221 cagatgatcc tctccggata cacgtttttt cccagcgaaa cgcttaacta tataaaaagc
     8281 aataaatgta gtacgaatag ttcaacgatc actgtgctat ctaatcgtga agtgaccata
     8341 ttacgttatc tggttagcgg attatctaat aaagaaa
//
LOCUS       DAPGWB010000180         8317 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.182, whole genome shotgun sequence.
ACCESSION   DAPGWB010000180 DAPGWB010000000
VERSION     DAPGWB010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8317
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.182"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(123..965)
                     /locus_tag="RHX79_004029"
     CDS             complement(123..965)
                     /locus_tag="RHX79_004029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199143.1"
                     /translation="MATLLLAVILVSGFIYVNLSLSTRYRYKRSNGWDAYFFVAAWGI
                     VFFLLGGFFTFILNVSGGFRWLANALNLTPDSFNGMLSSSKDKLQRINEIKQIAWVMI
                     SIVLAAISGFGNKLRTSRGDRRWDALAKAVGNNAFESLLMEASARQFPIIATLSSRKI
                     YVGLVTCPALENGLSEHLELLPMLSGYRDKDDLTISITTNYHQHYLDSGVISGMSRLN
                     IEDFRVLIPKDEVETISFFDTETYNKFKENEARDRKNCRKIDSKSASSRSKRAADAES
                     NDRA"
     gene            complement(965..1180)
                     /locus_tag="RHX79_004030"
     CDS             complement(965..1180)
                     /locus_tag="RHX79_004030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000094764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter ATPase"
                     /protein_id="HDV2199144.1"
                     /translation="MSSIAAFSLGNPVERLARVLKENQDKLNLSKDGFVSVDLSNKRA
                     MDAIKAQMDKLEGIKTSTVKEKTNRTR"
     gene            complement(1451..1684)
                     /locus_tag="RHX79_004031"
     CDS             complement(1451..1684)
                     /locus_tag="RHX79_004031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HDV2199145.1"
                     /translation="MRIEIMIDKEQKISQSTLDALESELYRNLRPLYPKMVIRIRKGS
                     SNGVELTGLQLDEERKQVMKIMQKVWEDDSWLH"
     gene            complement(1696..1884)
                     /locus_tag="RHX79_004032"
     CDS             complement(1696..1884)
                     /locus_tag="RHX79_004032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199146.1"
                     /translation="MQDYFLESLKLQRIDFFLKLVAASECSDEEKGLALQWVSELTDE
                     LMAKIRTHEYNRSMDVIS"
     gene            complement(2037..4409)
                     /locus_tag="RHX79_004033"
     CDS             complement(2037..4409)
                     /locus_tag="RHX79_004033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HDV2199147.1"
                     /translation="MNYSYSWNAEKKAINPYVETEEQSSVSALSNLIALYAADNEQEQ
                     LRREALSDQVWERYFFNESRDPVQREMEQDKLISRAKLAHEQQRFNPDMVILADVNAQ
                     PSHISKPLMQRIEYFSSLGRPKAYSRYLRETIKPCLERLEHVRDCQLSTSFRFMASHE
                     GLDGLLILPEMSQDQVKRLSTLVAAHMSMCLDAACGDLYVTDDVKPEEIRKTWEKVAA
                     ETLRLDVIPPAFEQLRRKRNRRRPVPYELIPGSLARMLCADWWYRKLWKMRCEWREEQ
                     LRAVCLVSKKASPYVSYEAVMHKREQRRKSLEFFRSHELVNEDGDTLDMEDVVNASSS
                     NPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHSTLNNGRPNPTWTNATVRQ
                     SSDYLVGMFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRAITALLR
                     KFAIREDREELGNNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAGEISKETGK
                     SLRDNAEYVNAWASLHRVQQFRFFGIPGRQAYRELRLLAGQAARQQGDKKAGAPVLDN
                     PRLDAILAAADAGCFATYIMKQGGVLVPHKYHLIRTAYEINEEPTAYGDHGIRIYGIW
                     SPIAEGKICTHAVKWKMVRKAVDVQEAAADQGACAPWTRGNNCPFAENLNQQEKDKSA
                     DGGTRTDITRMDDKQLHDYLHSMSKKERRELAARLRLVKPKRRKDYKQRITDHQRLQL
                     VYELKSRGFDGSEKEVDLLLRGGSIPSGAGLRIFYRNQRLQEDDKWRNLY"
     gene            complement(4409..5230)
                     /locus_tag="RHX79_004034"
     CDS             complement(4409..5230)
                     /locus_tag="RHX79_004034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001420002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199148.1"
                     /translation="MHHGIHHFHGTPVWGSAGDVHRIAVSGAGAFVSYVRPDQIAASI
                     QHAQVVGIDNGAFSAWVRGLKINWSDFYKWLLNYYHHPKVAFFVIPDVVDGGERDNDA
                     LINEVPKMFYGKATPVWHLHESIDRLIELCREWPRVCFGSSGEYAAIRTAHWHRRMQD
                     AFEAIYCRHNFKTAVHGLRMLDGRVLGNYPLATADSTNLACNVPKFNSKYPELTRAIQ
                     EAEYSRNLTEKELKAVILKNRCAILKGAIEAVRPPSVSDWLSNGLQPSQLELEIA"
     gene            complement(5236..6090)
                     /locus_tag="RHX79_004035"
     CDS             complement(5236..6090)
                     /locus_tag="RHX79_004035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001522695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDV2199149.1"
                     /translation="MSTILKWAGNKTAIMSELKKHLPAGPRLVEPFAGSCAVMMETDY
                     PSYLVADINPDLINLYKKVAADCEAFISRARVLFEEANREVAYYNIRQEFNYSTEITD
                     FMKAVYFLYLNRHGYRGLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQRATFIC
                     ASFDETLAMLKVGDVVYCDPPYDGTFSGYHTDGFTEDDQYHLASILEHRSSEGHPVIV
                     SNSNTSLTRSLYRNFTHHYIRAKRSIGVAAGEGKFATEMIATKSANWFSADFSRGRDS
                     TVIFGVQV"
     gene            complement(6087..6314)
                     /locus_tag="RHX79_004036"
     CDS             complement(6087..6314)
                     /locus_tag="RHX79_004036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HDV2199150.1"
                     /translation="MADAMDLVQQRVEEERQRHIRAARAKTPGVSRVLCVECEAPIPP
                     ARRRAIPGVQLCITCQEIAELKGKHYNGGAV"
     gene            complement(6314..6547)
                     /locus_tag="RHX79_004037"
     CDS             complement(6314..6547)
                     /locus_tag="RHX79_004037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2732 family protein"
                     /protein_id="HDV2199151.1"
                     /translation="MRNIETLTTKTGPDDAGLNLLLTEARLEERRARAEAMAARLDSL
                     ACHITSRQLNHVEAAELLRVTAEAIQNEAQEIH"
     gene            complement(6615..6956)
                     /locus_tag="RHX79_004038"
     CDS             complement(6615..6956)
                     /locus_tag="RHX79_004038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5347 domain-containing protein"
                     /protein_id="HDV2199152.1"
                     /translation="MAIEGAAATVPLRPGERLNGLNHIAELRAKVFGLNIESELERFI
                     KDMRDPRDINNEQNKRALAAIFFMAKIPAERHSISINELTTDEKRELIKAMNHFRAVV
                     SLFPRRLTMPN"
     gene            complement(6920..7120)
                     /locus_tag="RHX79_004039"
     CDS             complement(6920..7120)
                     /locus_tag="RHX79_004039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000956185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2724 domain-containing protein"
                     /protein_id="HDV2199153.1"
                     /translation="MLTKEPSFASLLVKQSPAMHYGHGWIMGEDGKRWHPCRSQDELL
                     AELSTKKRGNKWLLKALRRLFH"
     gene            complement(7128..7637)
                     /locus_tag="RHX79_004040"
     CDS             complement(7128..7637)
                     /locus_tag="RHX79_004040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory CII family protein"
                     /protein_id="HDV2199154.1"
                     /translation="MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLN
                     PAQPHLLTAPEIWLLTDLTEDSTLVDGFLAQIHCLPCVPINEVAKEKLPHYVMSATAE
                     IGRVAAGAVSGDVKTSAGRRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVT
                     GLGASFGLL"
     gene            complement(7702..7905)
                     /locus_tag="RHX79_004041"
     CDS             complement(7702..7905)
                     /locus_tag="RHX79_004041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000188449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HDV2199155.1"
                     /translation="MTPNISITLNTPHVTIERYSELTGLSIDTINDMLADGRLPRHRL
                     RKDKKREKVMINLAALTVDALSA"
     gene            8051..>8317
                     /locus_tag="RHX79_004042"
     CDS             8051..>8317
                     /locus_tag="RHX79_004042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001047328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain containing protein"
                     /protein_id="HDV2199156.1"
                     /translation="MDFNSGGKKAIERLVEAYGFGTRQALCDHLGVSKSTMATRYMRD
                     IFPADWVIQCALETGTSLNWLTTGHGSKQASANTNTIEVVKYLLS"
BASE COUNT         2131 a         2108 c         1850 g         2228 t
ORIGIN      
        1 acgcctgccc gctttatgta gtagttttca tgcaggtgca tgatctacgc gaaagcccgc
       61 cagttctggc gggccctagc aaaaacgatc ctcaaacgat catgcgatct catgcagcat
      121 agtcatgcac gatcatttga ctcagcatct gctgcacgct tgctgcgcga agatgcactt
      181 ttactatcaa tctttcgaca gttctttcta tccctggctt cattttcttt aaatttgtta
      241 tatgtctcag tatcaaaaaa cgaaattgtt tcaacctcat cttttggtat gagcacacgg
      301 aaatcttcga tattaagccg agacattcca cttatcacac cactatcaag ataatgttgg
      361 tgatagttag tcgtgatact aatcgttaga tcatctttat cccgataacc gcttaacatc
      421 gggagaagtt caaggtgctc tgaaagcccg ttttctaacg ccggacaagt aacaagacca
      481 acatagattt tgcgagacga cagagttgct atgatcggaa actgtcttgc ggacgcttcc
      541 atgagtaatg attcgaaagc gttattaccc acagctttag ctaaggcatc ccagcgacga
      601 tctccacgtg atgtgcgtaa cttatttcca aaacctgaaa tcgcagcgag gacaattgaa
      661 atcataaccc atgctatctg tttgatttca tttattcttt gaagtttgtc tttcgatgaa
      721 gacaacatgc cattaaaact gtcaggtgtt agattcaagg cattagccag ccaacgaaac
      781 cctccgctga cgttcaaaat aaaggtgaaa aaaccgccaa ggagaaaaaa aacgataccc
      841 caggcagcca caaaaaaata agcgtcccag ccgttggaac gcttatatcg gtatcttgtt
      901 gaaagtgata ggtttacata aataaaacca ctaaccaaaa tcactgctaa aagtaatgtt
      961 gccattatct ggttctatta gttttctctt ttacagtgct cgttttgatg ccttcaagct
     1021 tatccatctg tgccttgatg gcatccattg ctcttttgtt agacaagtct acggacacaa
     1081 aaccatcttt actaagattg agtttgtcct ggttctcttt aagaaccctt gccagacgtt
     1141 caactgggtt acccaggcta aatgcggcga tgcttgacat aactccccct tttcacatgg
     1201 cgcggaagtc tacactccga cgcctacaac ctcaacagat tatctttaaa atttagacaa
     1261 caatatcatc tgttgattgc gttacttaaa cttaagttca atgcgctcga tcatgcaagc
     1321 tgtttcttaa gaactgttaa tttcctggca tatatagtgg ttaaggtaac aaattgacac
     1381 taacgcctcg catagctcgt tgttcaacct tgctgacgcc agaagcaagt tcagacgcca
     1441 gcaacgtttc ttaatgcagc cagctgtcgt cttcccacac cttctgcata attttcatca
     1501 cttgttttct ttcttcgtcc agttgcaatc cggtcagttc cacaccgtta gagctacctt
     1561 tgcggatacg aattaccatt ttgggataca gaggacgcag attgcggtaa agctcggatt
     1621 caagggcgtc cagggtagac tggctaatct tctgctcttt atcgatcatt atttcaatgc
     1681 gcataaaaag tcacctcaac tgatgacatc cattgagcgg ttgtattcgt gggttctgat
     1741 ttttgccatg agttcatctg ttagttcaga aacccactgc aaagccagcc ccttctcttc
     1801 atcactacac tcactagccg ctacaagctt aagaaaaaaa tcaatgcgct ggagcttcaa
     1861 agactccaaa aaatagtcct gcatctttcc tcctatgaca ccaaagcaat actgtaaata
     1921 taaccactgt ttatatttac agtatataat aatcttactg atgtaaaacg tttttttacg
     1981 ttcatcagcc tgatatgcct ggtattatta agagcacgaa ttgttaaccc gcgtaattaa
     2041 tacaggtttc gccacttatc atcttcctgc aaacgctggt tccgatagaa gatacgcagg
     2101 cctgctcctg acggaatact gccgccgcga aggagtaaat cgacctcttt ctcgctacca
     2161 tcaaatcctc tggacttcag ctcatagacg agctgcagtc gctgatggtc tgtaattcgc
     2221 tgtttgtagt ctttacgccg tttcggttta accaggcgta accttgctgc cagttcccgg
     2281 cgctcttttt tgctcatact gtgcaggtaa tcgtgcaact gcttgtcatc catgcgggta
     2341 atgtccgttc tggtgccccc atcagctgat ttatctttct cctgttggtt caaattttca
     2401 gcaaagggac agttattgcc acgagtccaa ggggcgcaag cgccctggtc ggctgccgcc
     2461 tcctgaacat caacggcctt acgaaccatt ttccacttca cggcatgagt gcagatcttg
     2521 ccctctgcaa taggtgacca gatgccataa atacgaatgc cgtgatcgcc ataggcggtc
     2581 ggctcttcgt tgatttcata agcggttctg atgaggtgat atttgtgggg aaccagtacg
     2641 ccgccctgct tcatgatgta ggtggcaaaa caaccagcat cagcagcagc caggatggca
     2701 tcaaggcgcg ggttatccag taccggcgca cctgcttttt tgtccccctg ttgccttgcc
     2761 gcctgaccag ccagcaatcg cagttcacgg taagcctgac gccccggaat gccaaagaag
     2821 cggaattgct gaacacgatg cagagacgcc caggcattaa cgtattcagc attatcacgc
     2881 agggatttcc ccgtttcctt gctgatctcg ccagccagac cacgcccgtc aatgttctta
     2941 ctgatgtatt tcgcgatgta gcttgttggc gtacctttgc gcgggttaat caactcagac
     3001 ttaaagcgcg gcccagtgtt attgcccagt tcctcgcggt cttcacggat ggcaaactta
     3061 cgcagtaatg cagtgatggc gcggcggtct tttttgcgca taaaacacaa caagtgccag
     3121 tgaactgtac cgtcatgatg cggctcagcc acccgcacgc cataccaccg caatccggct
     3181 ttgtgcatcg ccttacgaaa tgcagcaaac atgccgacca gataatcact gctttgtctt
     3241 accgtcgcat ttgtccaagt tgggttgggc ctgccattat ttagcgtgga atggaaacgt
     3301 gacggacagg tgatggtgta gaaaacggcg cagtcaccgc gcatttccgc gataagctcc
     3361 aggcctttaa cacaggccat catctcattg cggcgatgcg cagggttgct gctgctggcg
     3421 tttaccacat cctccatgtc cagcgtgtcg ccgtcttcgt tcaccagttc atgagaacga
     3481 aaaaactcca gcgacttacg gcgctgctca cgtttatgca tcacggcttc atagctgaca
     3541 tagggagatg cttttttgct gaccaggcag acagcacgca actgctcttc ccgccattcg
     3601 caacgcatct tccataattt ccggtaccac cagtcagcgc acaacatacg cgccagcgaa
     3661 cccggaatga gttcataggg cacgggtcta cggcggtttc ttttccggcg gagttgctca
     3721 aacgcaggcg ggatgacatc cagacgcagg gtttccgctg ccaccttttc ccatgtcttg
     3781 cggatttctt ctggcttaac gtcatcggtg acatacaaat cgccacaagc tgcatcaagg
     3841 cacatgctca tatgcgcagc taccagggtg gacaggcgtt tcacctgatc ctgactcatt
     3901 tcaggcagga tcagcaggcc gtccagccct tcatggcttg ccataaagcg aaaagaagtg
     3961 gatagctgac agtcgcgtac atgctccagc cgttccagac atggcttaat cgtctcacgc
     4021 aaatagcggg aataagcctt tggcctgccc aggctgctga agtattcaat acgttgcatc
     4081 agtggcttgc tgatatggga aggctgggca ttaacgtccg ccagaatgac catatctgga
     4141 ttaaaacgct gctgctcatg cgccagcttt gcccgactaa tgagcttatc ctgctccatt
     4201 tcgcgctgga caggatcacg ggattcatta aagaaataac gctcccagac ctgatcactc
     4261 agtgcctcgc ggcgcagctg ttcctgctcg ttatcggcag cgtacagagc gatcaggttt
     4321 gaaagcgcag aaactgaaga ttgctcttcc gtctctacgt aaggattgat tgcttttttc
     4381 tcagcattcc aggaatagct gtagttcatt acgcaatctc cagttcgagc tgtgaaggct
     4441 gcaaaccatt cgacagccaa tcagaaactg aaggtgggcg aacagcttca attgcacctt
     4501 ttaaaattgc gcaacggttt ttcagaatga cagctttcag ctccttttcc gtcagattgc
     4561 gcgaatactc agcctcctga atagcccgcg tcagctcagg atatttgcta ttaaatttgg
     4621 ggacattgca ggcaagattt gtactgtcgg cagtcgccag tgggtaattt cccaacacac
     4681 gaccgtcaag catgcgcaaa ccatgaacag ctgttttgaa attgtgtcgg caataaattg
     4741 cttcaaaagc gtcctgcata cgacgatgcc agtgcgcagt tctgatagcc gcatattcac
     4801 cagacgatcc aaagcagaca cgaggccatt cacgacatag ctcgataagc cgatcgattg
     4861 actcgtgcag atgccagacg ggagttgcct tcccgtagaa cattttcgga acttcgttta
     4921 tcagggcatc attgtcacgt tcacctccgt ccacaacatc aggaatgaca aaaaaagcga
     4981 ccttaggatg gtggtaatag ttcaggagcc atttataaaa atcactccag ttaattttta
     5041 gcccacgcac ccatgcagaa aatgcgccgt tatcaatgcc gacgacctga gcgtgctgaa
     5101 tggacgccgc aatctgatct ggtcgtacat aggagacgaa agcgccagct ccgctcaccg
     5161 caatacgatg aacgtcgcca gcacttcccc agacaggcgt cccatggaaa tgatgaattc
     5221 cgtggtgcat ttctttcaca cttgcacccc gaaaataaca gtagagtcac gtcccctact
     5281 aaaatcggca ctaaaccaat tagcagattt agtggcaatc atctctgttg caaattttcc
     5341 ctcccccgct gcaacgccga tgctccgttt cgccctgatg tagtggtgag tgaaattacg
     5401 ataaagggac cgggtcaaag acgtgttact gttagaaaca atgaccggat gtccttctga
     5461 tgaccgatgt tcaagaatgg atgccaggtg atactgatca tcttcagtga aaccatcagt
     5521 gtgatagccg gaaaacgtac cgtcataagg cggatcgcaa tacaccacat cccccacctt
     5581 caacatcgcc agcgtttcat caaagctggc gcagataaac gttgcccgct gggctttctc
     5641 tgcaaatgcg cgaatttctt tttcagggaa atacggattt ttataattac cgtagggaat
     5701 gttgaaatgc ccgctcttgt tatagcgaca taaaccacgg taaccgtgac gattgagata
     5761 caggaaatat accgctttca tgaaatcagt aatttcagtg gagtaattaa actcctgcct
     5821 tatgttgtaa taagccacct ccctgtttgc ttcctcaaat aaaactctgg cacgagatat
     5881 aaacgcctca caatcagcag caaccttttt atagaggttg attaaatcag gattaatatc
     5941 cgcaacaaga tagctggggt aatccgtctc catcatcact gcacaggaac ccgcgaaagg
     6001 ttcaaccagt cgcgggccag caggaagatg ctttttcagt tcggacatta tggcggtttt
     6061 atttcctgcc catttcagga tggtgctcat acagcacctc cgttgtaatg tttgcctttc
     6121 agctctgcga tttcctgaca ggtaatgcaa agctgcacac ccggaatggc acggcggcgt
     6181 gctggcggaa ttggcgcttc acactcaacg caaagcacgc gggacacgcc cggcgttttg
     6241 gcacgggcag cacggatatg gcgttggcgt tcttcttcaa cgcgctgctg tacgagatcc
     6301 attgcatcag ccatcagtgg atctcctgcg cttcgttctg gattgcttca gcagtcacac
     6361 gcagcagttc tgccgcttcg acgtggttta gctggcggga ggtgatatga cacgccaggc
     6421 tatcgaggcg agcagccatt gcttcagccc ttgcccggcg ttcttccaga cgagcctctg
     6481 tcagtaaaag attaagacct gcatcatccg gtccggtttt ggtcgtgagg gtttcaatat
     6541 tacgcataag caattctcct gaatttagat aaagggatgc ccggcgggtt tacgccatta
     6601 atttcattag ttggttaatt cggcatggtt agccgtctgg gaaataagct caccactgca
     6661 cgaaaatgat tcattgcttt aatcaactcc cgcttttcgt cagtggtcag ctcattaatg
     6721 ctgatgctat gacgttcagc tggaattttt gccataaaga atatggcagc cagtgcccgt
     6781 ttattttgtt cattattgat atcccgagga tcacgcatat ctttaataaa ccgctcaagc
     6841 tctgactcaa tattcaaacc aaaaactttc gcccttaact ccgcaatatg attaagtcca
     6901 ttcaggcgtt caccgggtct taatggaaca gtcgccgcag cgccttcaat agccatttgt
     6961 tcccccgttt tttcgtagat agttctgcca gcaattcatc ttgtgaacgg cacggatgcc
     7021 agcgtttacc atcctcaccc atgatccagc cgtgaccgta gtgcattgcc ggactttgtt
     7081 ttaccagcag cgatgcaaat gatggttctt tcgtcagcat aagcacctca cagcaaaccg
     7141 aatgaagcac cgaggccagt cacggtatca actgcactcg ccatcgcagg attagcctgt
     7201 aaacgggcct gcaatgaaac agcagccagc gccatcagtc gtgtaacaga gttaatgctg
     7261 ctgatcgcat cacgacggcc tgcactggtt tttacatcgc cagaaaccgc acctgccgcg
     7321 acacgcccta tctctgcagt tgcactcatg acgtaatgcg gcagtttctc ttttgccacc
     7381 tcattaatcg gtacacatgg caggcagtga atctgtgcca gaaagccatc taccagcgtt
     7441 gaatcttcag tcagatcggt aagcaaccag atttctggtg cggttaataa atgaggttga
     7501 gctgggttca gcttgttccg cagaatctgc acattcatgc ctgcacgttc tgccagttgc
     7561 actaggttgt ggcgcaatgc gaatgcacga caggcttcat caaaatgtgg atgtttggaa
     7621 acttggtaat caaacatggt tttcaattcc gaacttatcg caaaatcgaa ctcagcgtct
     7681 tattgcgaaa atagacgtct attaagcaga caaagcatca acagtcagag cagccaggtt
     7741 aatcattacc ttttcacgtt ttttgtcttt acgaagacga tgacgaggta gtcggccatc
     7801 agccaacatg tcgttaatcg tatcaataga aaggccagtc agttcgctat aacgttcgat
     7861 tgtgacatgt ggtgtattca gagtaattga aatgttaggt gtcataaggc aacattcctt
     7921 ctagatatgg cttgtggcga gccgttgttt gtcgtgatta gtagtaaagg ctccaaaaga
     7981 agacttctgg ttcaacttta agattgcttt tggaatctgt caacgaattt tggatttctt
     8041 tggaggattt gtggatttca atagcggcgg taagaaagcc atagaacgtt tggttgaagc
     8101 atacgggttc ggtacccgtc aggctctctg tgatcattta ggtgtttcta agagcaccat
     8161 ggcaacgcgt tatatgcgtg atatttttcc ggcagattgg gtaatccagt gcgcccttga
     8221 aacgggtacc tcgcttaatt ggctaacaac agggcatggt tcaaagcaag catcagcaaa
     8281 tacaaatact atagaagtag taaaatattt attgtct
//
LOCUS       DAPGWB010000181         8283 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.183, whole genome shotgun sequence.
ACCESSION   DAPGWB010000181 DAPGWB010000000
VERSION     DAPGWB010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8283
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.183"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(31..1587)
                     /locus_tag="RHX79_004043"
     CDS             complement(31..1587)
                     /locus_tag="RHX79_004043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HDV2199157.1"
                     /translation="MNNTLPDDIEQLKALLIAQQAVIVRLPGEITGYAREISSLRALV
                     AKLQRMLFGRSSEKSREKIEKKIARAETRITELQNRLGEAQLQLTSMAGETAPKTSDS
                     PVRKALPATLPRDRQVISPAETECPVCSGKLKPLGESISEQLDIINTAFRVIETVRPK
                     LACSRCDCIVQAPQPPKPIERSYASPALLARIIMAKFAEHLPLYRQSEIYARQGVELH
                     RNTMGRWVDIMGEQLRPLYDELKHYVLMPGKVHADDTPVNVLEPGQGKTRTGRLWVYV
                     RDDRNAGSTMPAAVWFSYSPDRKGIHPQQHLADYRGILQADAYAGYNALYESGQVTEA
                     ACMAHARRKIHDVHARAPTDITTEALQRIGELYAIEAEIRGSPAEERLAVRKARTVPL
                     MQSLYEWLQGQMSTLSRHSDTAKAFTYLLKQWDALNEYCHNGWVEIDNNLCENALRVV
                     ALGRRNYMFFGSDGGGESAAVMYSLIGSCKLNGIEPETWLRHVISVINTWPANRVKEL
                     LPWNVTQSVN"
     gene            complement(1607..1954)
                     /gene="tnpB"
                     /locus_tag="RHX79_004044"
     CDS             complement(1607..1954)
                     /gene="tnpB"
                     /locus_tag="RHX79_004044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HDV2199158.1"
                     /translation="MITLPTGTRIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIF
                     VFRGRSGKMVKILWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGIAW
                     QHPKRTERSGIRI"
     gene            complement(1951..2625)
                     /locus_tag="RHX79_004045"
     CDS             complement(1951..2625)
                     /locus_tag="RHX79_004045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
                     /protein_id="HDV2199159.1"
                     /translation="MNSQTKKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTI
                     HTLFQRFIASGIAWPLPDSVSLAQLDAILYANRKKELTEPQISEGTWRKERRASYSRE
                     FKVRLAKQALQPGAVVAWIAREHGINDNLLFKWKSQYEDGLLSDDDIQECMPVPVALT
                     DTPEPTRPVTNPFWRNKPDECPECDPGNVPRCELHLKSGVVKLFDPLTPEMLRALIRE
                     MKGGTR"
     gene            complement(2708..3085)
                     /locus_tag="RHX79_004046"
                     /pseudo
     CDS             complement(2708..3085)
                     /locus_tag="RHX79_004046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001690050.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(3336..4367)
                     /gene="f17g"
                     /locus_tag="RHX79_004047"
     CDS             complement(3336..4367)
                     /gene="f17g"
                     /locus_tag="RHX79_004047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F17G fimbrial adhesin"
                     /protein_id="HDV2199160.1"
                     /translation="MTNFYKVFLAVFILVCCNISHAAVSFIGSTENDVGPSQSSYSRT
                     HAMDNLPFVYNTGYNIGYQNANVWRISGGFCVGLDGKVDLPVVGSLDGQSIYGLTEEV
                     GLLIWMGDTNYSRGTAMSGNSWENVFSGWCVGNYVSTQGLSVHVRPVILKRNSSAQYS
                     VQKTSIGSIRMRPYNGSSAGSVQTTVNFSLNPFTLNDTVTSCRLLTPSAVNVSLAAIS
                     AGQLPSSGDEVVAGTTSLKLQCDAGVTVWATLTDATTPSNRSDILTLTGASTATGVGL
                     RIYKNTDSTPLKFGPDSPVKGNENQWQLSTGTETSPSVRLYVKYVNTGEGINPGTVNG
                     ISTFTFSYQ"
     gene            complement(4369..6837)
                     /locus_tag="RHX79_004048"
     CDS             complement(4369..6837)
                     /locus_tag="RHX79_004048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000953872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HDV2199161.1"
                     /translation="MLSVPLWAAEDAEFDPSFLSRTPGSSVIDVRRFTHGNPVPSGNY
                     YSDIYLNGEWKGNAELSFRDMSSSQEESVLCVTPELLSILDVSPEAVAREPDTGNGRC
                     MPFSAVVPDAKIRFDLSLLRLNVEIPQAMLVSRPRGYISPSQWQTGVPAAFVSYDVNH
                     WRYRTPDMENNQSYLGLRAGFNAGGWAFRHRGTESWSDGHAEGYRSIETNLQHDIAML
                     RAQLTLGDFTTTGELMDSNSLRGIRLASDDRMLPGSLRGYAPVVRGMAGSNARVTVRQ
                     NGNIIYETTVPAGPFSISDLYPSGYGGDLTVTVTESDGQTRSFIVPFASVAQLVRPGF
                     SRWQVAAGRYRYGNRTFSDTVFQGTLQYGLTNDITLNTGMSTAPHYLSGLGGVAFNTP
                     LGAVATDITLARTTFPGSDTTHRGYSLHAGYSARIPETSTNVTLAAYRYSSRDFWSLR
                     DAILTRNRDVINDSSVRSATGYRPRNQLQLTVNQSLGEGWGNLYLTGATYHYWGHTGT
                     FNEYQAGYNNVWKKMSYQIGFSQTRRSGDYHHDNRFFFSFSLPLSDTGRTLLSTTVNV
                     SDKNSNSIQSSISGVSGDDNQLSYGVSLNTQENGPTGYAVNGSYRSPVATLQATAGND
                     SRHNRQISAGISGAIVAHPFGVTASNDLGDTFTVIHADGAGGAVINNAPGNRLDPWGN
                     GIVPYVTPYEKNYISIDPTALAADVELSATEREIIPRANSTTMVTFTTKTGKAMLFDV
                     KMPDGTPPPMAAEALTADGKSAGYIAQGGRLFVRDLDAEKGMLRIVWGSGQNDSCVIH
                     YSASGENARGNAVPENHHVVCMRQ"
     gene            complement(6921..7643)
                     /locus_tag="RHX79_004049"
     CDS             complement(6921..7643)
                     /locus_tag="RHX79_004049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016232883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HDV2199162.1"
                     /translation="MKHILLFIFTVLLSLPSYGSVVIMGTRVIYPAEQKSINVRLNNG
                     DSTPSLIQAWLDTGDPSSPPDSVRVPFIITPPVFRMEPLSGQTMRIMYTGEKLPADRE
                     SLFWLNVLDIPAKPSFAGKSEKAQGYNYLQFAVRSRIKFFFRPDGLPFSPDDAYKKVT
                     WQLTGGDTLQASNPTPYFITFSTVSVGQGAQKVSSTQGGMAAPFSSVTFRLKQKVSPS
                     GKVEWTVVNDNGGYQKGESVVK"
     gene            complement(7711..8250)
                     /locus_tag="RHX79_004050"
     CDS             complement(7711..8250)
                     /locus_tag="RHX79_004050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_131199595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2199163.1"
                     /translation="MRKIQFILGILAAASSSATLAYDGTINFTGKVVAQTCSVSSGSK
                     NLTVTLPTVSEASLAAATNTAGLTPFTIELTGCGTSAASGAQNVKAYFEPNATTDYDT
                     GNLNIAASSANNVQIQLLNADGVTPIKLGQDATGQKVTAVQIDNAAMKLRYNAQYYAT
                     AQATAGDVSATVNYTIVYQ"
BASE COUNT         1995 a         2217 c         1993 g         2078 t
ORIGIN      
        1 aagcgcaccg tgaaggacgt ggggtaaaaa ttagtttaca gattgagtga cattccaggg
       61 caacaactct ttcacgcggt tggcaggcca ggtgttgatt acactgatca cgtggcgtag
      121 ccacgtttcc ggctcgattc cgttaagttt gcagctaccg atcaggctgt acatcactgc
      181 cgcactctcg cctccaccat cagagccgaa gaacatgtag ttacgccgcc ccagtgcaac
      241 tacccggagg gcgttttcac acaggttatt gtcgatctcc acccagccat tgtggcagta
      301 ttcgttcaga gcgtcccatt gcttcagcag ataggtgaac gctttcgctg tatccgagtg
      361 gcgcgacagc gtgctcatct gcccctggag ccactcatac aacgactgca ttagcggtac
      421 cgttctggct tttctgaccg ccagtcgctc ttctgccgga ctgccgcgga tctcagcctc
      481 gatagcgtac agttcaccga tacgctgcag ggcttccgtg gtgatgtcag ttggcgctct
      541 tgcatgcaca tcgtggattt ttctccgggc atgggccata caagccgctt cggttacctg
      601 accgctttcg taaagagcat tgtaacccgc atatgcatcg gcctgcagga tacctctgta
      661 gtccgccaga tgttgctgtg ggtggatgcc tttgcggtcg ggagagtatg agaaccacac
      721 cgctgccggc atggtcgaac cggcgttgcg atcgtcacga acatagaccc acagccgtcc
      781 ggtacgggtt ttaccctgac ccggctccag tacatttacc ggcgtgtcat cggcatgcac
      841 tttacccggc atcagcacat agtgcttcag ttcatcatac agcgggcgaa gctgctctcc
      901 catgatgtca acccagcgcc ccatcgtatt gcggtgcagc tccacgccct ggcgggcata
      961 gatttccgac tgacggtaca gcggcagatg ctcggcgaac ttagccatga ttatgcgggc
     1021 cagcagagcc ggactggcgt aactgcgctc gatgggtttt ggtggctgcg gagcctgaac
     1081 tatacagtcg caccggctgc aggccagttt tgggcgaacc gtttcgatta ccctgaacgc
     1141 ggtgttgatg atatccagtt gttcagagat gctttctccc agcggtttca gtttgccgct
     1201 gcagacgggg cattcggttt ctgccgggga gataacctgc ctgtcacggg gaagtgttgc
     1261 cggaagtgct ttgcggacgg gagagtctga tgttttcggc gctgtctctc cggccattga
     1321 ggtgagttgc aactgcgcct caccaagcct gttctggagc tcggttatac gcgtttctgc
     1381 ccgtgcgatc ttcttttcta tcttctcgcg gcttttctcg ctgctgcgac cgaacaacat
     1441 tctctgcagt ttagcgacca gcgctctgag tgagctgatc tcgcgggcat agccggttat
     1501 ttcaccaggc agacggacga taacagcctg ctgtgcgatc agcagggcct tcagttgctc
     1561 gatgtcgtcg gggagtgtgt tgttcattcc cctgttttat cacgggttat atccggatgc
     1621 cagaccgttc tgtccgtttg ggatgttgcc acgcgatccc ctccagtagc atggataact
     1681 gagctggcgt caggtgcact ttcccttccc gggttaccgg ccagacgaag cggccccgtt
     1741 ccaggcgttt agcgaacagg cataacccgt cacgatcggc ccacagtatt ttcaccattt
     1801 tgccactgcg gccccggaag acgaagatat gcccggagaa cgggtcatct ttcagcgtgt
     1861 tctgcacctt cgaagccagg ccgttgaagc cacaacgcat atctgtgatg ccagcgatga
     1921 tccagattct ggtaccggtt ggcagcgtta tcatcgggta cctcctttca tttcgcggat
     1981 tagcgcccgt aacatttccg gagtgagagg gtcaaacagt tttaccacac ctgatttaag
     2041 atgcagctcg caccgtggga cgtttccggg atcacactca gggcactcat caggcttgtt
     2101 acgccagaag ggatttgtaa ctggtctggt cggctctggc gtatcagtca gagccaccgg
     2161 gacaggcatg cattcctgta tgtcatcatc gctcagtaag ccgtcctcgt actggctttt
     2221 ccatttaaac agcaggttat cattgatacc gtgctctctg gcgatccagg caacaacagc
     2281 accgggctgt aatgcctgct tagccagacg gaccttaaat tcacggctgt agctggctcg
     2341 ccgttctttt cgccatgtgc cttcgctgat ttgaggctct gttaattcct tctttctgtt
     2401 ggcataaagg atggcgtcaa gctgagctaa tgaaactgaa tcgggcaatg gccatgcgat
     2461 accggatgca ataaatcgct gaaaaagcgt atgtattgtg gaatgactga gacctagacg
     2521 ctgagcgatg gcccggatgg tcagtttatc ttcaaatctt aaacgcagag catcaggcaa
     2581 ataagaacgg aagcagggaa tatctttttt tgtctgggaa ttcatcgttc gtgtccatct
     2641 atatagatgg gcgcgattgt tgccagacag gacaattttc acaagacgtc gcagatgggg
     2701 cgcttacgtt gattccgttc tcacgagcta tttgtgcgac acaggcaccg ggtaaaagag
     2761 tttgctgaac aagtctccat ttaaactccg gtgaaaatcg gttccggcgg gttttctctg
     2821 ttttcacagt ctgagttact gtcggggctg aagggtatcg ccccgggaac agagcccggg
     2881 ccagttgcac gcaggaatat tccccgaaaa gaggccagtc agtgaatacc tggtgaaatc
     2941 gcctcaccag agaaaaaatg gcggttttgc tgataccggt ctgcgcagaa atgcgcgggt
     3001 acgacagtga ctcgtcaaat ctcagttgta gcacacgcag gatcaattcc ggattgtctg
     3061 ccagtaccgc ttttcgtgca ttcatcttaa atgtcccttt actgcgaaaa tggacattag
     3121 tatcggaaac aggaaaggga ggcgaaagac ggtttaaatg agacggttac accacatctt
     3181 ctttttgtct ttcactgaaa aatgcctgac aaaatcgctc atgaaaaatg ctcctgaaac
     3241 gctgttatcc gcctccagaa accggtactg ctttcaccaa cgcaaatcat tttgttatta
     3301 ctgtctgacc tgttctcccc tcccgggact cgctgttact gataggaaaa cgtaaatgtt
     3361 gatattccgt taaccgtacc cggattaatt ccctcaccag tattcacata ctttacatac
     3421 aaccggactg agggtgacgt ttccgttcct gtcgataact gccactggtt ttcatttccc
     3481 tttaccggcg aatcaggtcc aaacttcagg ggcgtactgt cagtgttttt gtatattctc
     3541 agcccgactc cggttgcagt cgatgccccc gtcagtgtga gtatatcgct tctgttggac
     3601 ggtgtggtcg catcagtcag tgttgcccat actgttactc cggcatcaca ctgtaatttc
     3661 agtgatgttg tcccggcgac aacttcatca ccggatgatg gcagttgtcc ggcagaaatt
     3721 gcagccaggc tgacattgac tgcggaaggt gtcagtaatc tgcacgatgt tactgtgtca
     3781 ttcagcgtaa atggattcag gctgaaattc actgtggtct gaacactgcc tgcagatgaa
     3841 ccgttatagg gcctcattct gatactcccg atactggttt tctgtacact gtattgcgca
     3901 gaggaatttc tttttaaaat taccggtctt acgtgaacag acagtccctg cgttgataca
     3961 taatttccca cgcaccatcc ggaaaagaca ttctcccatg agtttccact catcgcggta
     4021 cccctggaat aattcgtgtc ccccatccat ataaggagtc ccacctcctc cgtcagccca
     4081 taaatactct gcccgtcaag actgccaacc acgggtaaat ccactttccc gtccagacca
     4141 acacaaaacc cgccactaat acgccagaca tttgcattct gatatccaat gttgtaaccg
     4201 gtattataga caaatggcag gttatccatt gcatgagttc tggaataaga gctctgagac
     4261 ggtccaacat cattctccgt actgccaata aatgaaactg ccgcatggct gatattgcag
     4321 caaaccagaa tgaatacagc cagaaagacc ttataaaaat ttgtcatatt attgcctcat
     4381 gcatactaca tgatggtttt ccggaacagc atttcccctg gcattttctc cggacgcact
     4441 atagtgaatg acacaactgt cattctgccc gcttccccag actatcctga gcatcccttt
     4501 ttcagcatcc aggtcacgta caaataaccg gccaccctga gcaatgtagc ctgcagattt
     4561 cccgtctgct gttaatgctt ccgcggccat cggcggcggc gttccgtccg gcatcttcac
     4621 atcaaacaac atggctttcc ccgtttttgt tgtgaaggtc accatggtgg tactgttggc
     4681 ccggggaata atttcccgct ctgttgcaga cagttccaca tccgcagcca gcgctgtcgg
     4741 gtcgatactg atataattct tttcgtaagg tgtgacatac ggaacaatgc cgttacccca
     4801 ggggtccagc cggttacccg gcgcattatt aatcaccgcc ccaccggcac catcagcatg
     4861 aataacggta aatgtgtcac caaggtcatt actggccgtc acaccaaacg gatgcgccac
     4921 tattgccccg gatataccgg cagatatctg acggttatgg cgactgtcat tacctgccgt
     4981 ggcctgcagg gtggccaccg gtgaacgata actgccattc accgcatacc ctgtcggtcc
     5041 gttttcctgg gtgttcaggg acacaccata tgacaactga ttgtcatccc cgctgacacc
     5101 actgatactg ctctgaatgc tgttactgtt tttatcgctg acattcactg tcgtggacag
     5161 caacgtcctt cccgtatctg aaagtggcag ggaaaaactg aaaaagaacc ggttatcatg
     5221 atgataatca ccactccgtc gggtctggga aaagccaatc tggtaactca tttttttcca
     5281 gacgttgtta taaccggcct ggtactcatt gaatgtccct gtatgccccc agtaatgata
     5341 agtggctccg gtcagataca ggtttcccca tccctcacca agactctggt tcacagtcag
     5401 ttgcaactga ttccttggcc ggtaaccagt tgcactcctg accgatgaat cattaatcac
     5461 atcacgattc ctggtcagga tggcatcccg aagactccag aagtcacggg atgaataacg
     5521 gtaagccgcc agcgtcacat ttgtactggt ttccggtatt cgtgcactgt aaccggcatg
     5581 caggctgtag ccgcgatgtg tcgtgtcaga acccgggaaa gtcgttctgg ccagcgtaat
     5641 atccgtggca acagccccca gtggtgtgtt gaatgccaca ccacccagcc ctgacagata
     5701 atgaggtgcg gtactcatcc ccgtattcag ggtgatatca tttgtcagcc cgtactgcag
     5761 ggtcccctgg aatacggtat cgctgaatgt cctgttaccg taacgatacc gcccggctgc
     5821 cacctgccag cgactgaacc ccgggcgaac cagttgtgca accgaagcaa acggcacgat
     5881 aaaactcctg gtctgtccgt ctgactctgt cacagtgact gtcaggtcac caccatatcc
     5941 actgggataa aggtcactga tggagaaagg ccctgccggc acggtagttt cataaataat
     6001 gttaccgttc tgccggacag tgaccctggc gttacttccg gccatccccc gaaccacagg
     6061 ggcataacca cgcaacgaac ccggcagcat ccggtcatca gaagccagtc ttattcccct
     6121 gaggctgtta ctgtccataa gctcacctgt ggtggtgaaa tcccccagtg tcagttgcgc
     6181 acgcaacatg gctatgtcgt gctgaaggtt cgtttcaata ctccggtaac cttctgcatg
     6241 accgtcactc cagctttctg tcccccggtg acgaaatgcc cagcctcctg cgttaaagcc
     6301 ggcacgaaga ccaagataac tctgattatt ttccatatcg ggcgtccggt aacgccagtg
     6361 attcacgtca taactgacaa aggcagccgg cacccccgtc tgccactgag aaggtgatat
     6421 gtatccccgt ggacgggaaa ccagcatggc ctgcggaatt tcaacattca gccgcagcag
     6481 tgacaggtca aaacggattt ttgcatcagg tacaactgca gaaaatggca tgcaacggcc
     6541 atttccggta tccggttcac gggcaacggc ctcgggtgac acatccagaa tggataacag
     6601 ttccggcgtc acacacagaa cactctcctc ctgtgaagag gacatatcac ggaatgacaa
     6661 ttccgcattt cctttccatt caccgttcag ataaatgtct gaataataat tccctgaggg
     6721 aacaggattc ccgtgcgtga aacgacggac atcaatcaca ctgctccctg gcgtgcggct
     6781 cagaaaactc gggtcaaatt cagcatcctc tgccgcccac aaaggcacag acagcatata
     6841 cagtcccgac agacaacata aataaatgac acggtacttc agaccggata aagaataatg
     6901 actcacttac ggggccctta ttatttcaca acggattcgc ctttctggta accaccatta
     6961 tcattcacca ccgtccattc cacttttcct gacggagaaa ccttctgctt aagtctgaaa
     7021 gtgacagaag aaaacggtgc ggccattccc ccctgagtac tgctgacttt ctgagctccc
     7081 tgcccgacac tgacagtact gaaggtaata aaataaggcg tgggattact ggcctgaagg
     7141 gtatcaccgc ctgtaagctg ccatgtcact ttcttatatg catcatcagg agaaaaaggc
     7201 agaccatcag ggcggaaaaa aaacttaatc cggcttcgta cggcaaactg aaggtaatta
     7261 tatccctgtg ctttttcaga ttttccggca aaagaaggtt tggccggaat atcaagaaca
     7321 ttcagccaga acagtgattc cctgtctgcc ggaagttttt ctcccgtata catgattcgc
     7381 attgtctgtc cggaaagcgg ctccatccgg aaaacaggag gcgtaataat aaacggcacc
     7441 ctgacagagt caggagggga agacgggtcc cctgtatcaa gccatgcctg tatcagggat
     7501 ggcgtactgt ctccgttatt cagccggaca ttaatacttt tttgttctgc aggataaata
     7561 accctggtcc ccataataac cacactgcca tatgagggca gagacaaaag aacggtaaaa
     7621 atgaacagca gaatatgttt catacaggct ccgtaaacac ggggcaaaat gccccgtgaa
     7681 cacttaagaa ggcaggtatt aagataaaaa ttactgataa acgatggtgt aatttactgt
     7741 ggcagagaca tcaccagctg tagcctgagc tgtggcataa tattgtgcat tataacgcag
     7801 tttcatagct gcgttatcaa tctgtacagc tgtaaccttc tgtcctgtag catcctggcc
     7861 tagttttatg ggagtaactc catctgcatt cagtagctgt atctgaacgt tatttgcact
     7921 actggcagca atatttagat tacctgtatc gtaatcagtc gtggcgttag gttcaaaata
     7981 agcttttacg ttctgagcac cagaagctgc actggtacca cacccggtca gctcaatggt
     8041 aaatggagtc agacctgcag tatttgttgc ggcagccaat gaagcttcag aaacagtcgg
     8101 taatgtaacg gttaaattct tgcttcctga tgaaacagaa caagtctgag caacgacttt
     8161 cccagtaaaa ttaattgtac cgtcataagc aagcgtagca gaagatgacg cagccgccag
     8221 tattccaagg ataaattgaa ttttccgcat agaatcctca gtgaaaactg ataagaaaat
     8281 atc
//
LOCUS       DAPGWB010000182         8264 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.184, whole genome shotgun sequence.
ACCESSION   DAPGWB010000182 DAPGWB010000000
VERSION     DAPGWB010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8264
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.184"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(8..355)
                     /gene="trbA"
                     /locus_tag="RHX79_004051"
     CDS             complement(8..355)
                     /gene="trbA"
                     /locus_tag="RHX79_004051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001287890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbA"
                     /protein_id="HDV2199164.1"
                     /translation="MSEDYLKMFTGVVLLMFVIIAGYFFSERNDRKMFLLSSLVFLVI
                     NIACLYVLTASLWFLCGAIMSQGAALVVSIVAAALPDVTSFDRFRRIFICIVLSSVWS
                     GVMWFFIRGLMTG"
     gene            complement(371..1114)
                     /gene="traF"
                     /locus_tag="RHX79_004052"
     CDS             complement(371..1114)
                     /gene="traF"
                     /locus_tag="RHX79_004052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly protein TraF"
                     /protein_id="HDV2199165.1"
                     /translation="MNKALLPLLLCCFIFPASGKDAGWQWYNEKINPKEKENKPVPAA
                     PRQEPDIMQKLAALQTATKRALYEAILYPGVDNFVKYFRLQNYWTQQAGLFTMSARKA
                     MLAHPELDYNLQYSHYNGTVRNQLAADQAQQRQAIAKLAEHYGIMFFYRGQDPIDGQL
                     AQVINGFRDTYGLSVIPVSVDGVINPLLPDSRTDQGQAQRLGVKYFPAMMLVDPKQGS
                     VRPLSYGFISQDDLAKQFLNVSEDFKPNF"
     gene            complement(1107..1364)
                     /gene="trbE"
                     /locus_tag="RHX79_004053"
     CDS             complement(1107..1364)
                     /gene="trbE"
                     /locus_tag="RHX79_004053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000864342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbE"
                     /protein_id="HDV2199166.1"
                     /translation="MKVIFTSNRFIDFLIRLLITAIVISPVIIWSWDTVKETTADGML
                     AAAFVILYSGVLLFILYFCFSALTDLQKPDERKSDERNEDE"
     gene            complement(1391..3199)
                     /gene="traN"
                     /locus_tag="RHX79_004054"
     CDS             complement(1391..3199)
                     /gene="traN"
                     /locus_tag="RHX79_004054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001756807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system mating-pair
                     stabilization protein TraN"
                     /protein_id="HDV2199167.1"
                     /translation="MKRILPLILALVAGMAQADSNSDYRAGSDFAHQIKGQGSSSIQG
                     FKPQESIPGYNANPDETKYYGGVTAGGDGGLKNDGTTEWATGETGKTITESFMNKPKD
                     ILSPDAPFIQTGRDVVNRADSIVGNTGQQCSAQEISRSEYTNYTCERDLQVEQYCTRT
                     ARMELQGSTTWETRTLEYEMSQLPAREVNGQYVVSITSPVTGEIVDAHYSWSRTYLQK
                     SVPMTITVLGTPLSWNAKYSADASFTPVQKTLTAGVAFTSSHPVRVGNTKFKRHTAMK
                     LRLVVRVKKASYTPYVVWSESCPFSKELGKLTKTECTEAGGNRTLVKDGQSYSMYQSC
                     WAYRDTYVTQSADKGTCQTYTDNPACTLVSHQCAFYSEEGACLHEYATYSCESKTSGK
                     VMVCGGDVFCLDGECDKAQSGQSNDFAEAVSQLAALAAAGKDVAALNGVDVRAFTGQA
                     KFCKKAAAGYSNCCKDSGWGQDIGLAKCSSDEKALAKAKSNKLTVSVGEFCSKKALGV
                     CLEKKRSYCQFDSKLAQIVQQQGRNGQLRISFGSAKHPDCRGITVDELQKIQFNRLDF
                     TNFYEDLMNNQKIPDSGVLTQKVKEQIADQLKQAGQ"
     gene            complement(3196..3834)
                     /gene="trbC"
                     /locus_tag="RHX79_004055"
     CDS             complement(3196..3834)
                     /gene="trbC"
                     /locus_tag="RHX79_004055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001553832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly protein TrbC"
                     /protein_id="HDV2199168.1"
                     /translation="MKLSMKSLAALLMMLNGAVMASENVNTPENRQFLKQQENLSRQL
                     REKPDHQLKAWAEKQVLENPLQRSDNHFLDELVRKQQASQDGKPRQGALYFVSFSIPE
                     EGLKRMLGETRHYGIPATLRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGI
                     RTVPALVVFCSQGYDIIRGNLRVGQALEKVAATGDCRQVAHDLLAGKGDSGK"
     gene            complement(3843..4835)
                     /locus_tag="RHX79_004056"
     CDS             complement(3843..4835)
                     /locus_tag="RHX79_004056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer pilus assembly protein TraU"
                     /protein_id="HDV2199169.1"
                     /translation="MKRSLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFP
                     LSLGSIKVSQGKVPDTANPSMPIQICPAPPPLFRRIGLAIGYWEPMALTDVTRSPGCM
                     VNLGFSLPAFGKTAQGTAKKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLD
                     IAYLSEIDPTWTDSSLTTILNPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGS
                     QGSMYPFNGWVSNESSPLQSSLLVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILP
                     KERWRYQMVNMYPDSGQCHPFGRSVTRWETGKNPPNTKKNFGYLMWRKRNCVFL"
     gene            complement(4832..5464)
                     /gene="traW"
                     /locus_tag="RHX79_004057"
     CDS             complement(4832..5464)
                     /gene="traW"
                     /locus_tag="RHX79_004057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system protein TraW"
                     /protein_id="HDV2199170.1"
                     /translation="MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLT
                     ALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEG
                     RVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQTPPILESKIILVQGSIPEM
                     QKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEFIPAEEGRK"
     gene            complement(5461..5847)
                     /gene="trbI"
                     /locus_tag="RHX79_004058"
     CDS             complement(5461..5847)
                     /gene="trbI"
                     /locus_tag="RHX79_004058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system protein TrbI"
                     /protein_id="HDV2199171.1"
                     /translation="MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNA
                     PVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVS
                     PAVVQGAPDITREIQQDIARRMRAEP"
     gene            complement(5844..>8264)
                     /gene="traC"
                     /locus_tag="RHX79_004059"
     CDS             complement(5844..>8264)
                     /gene="traC"
                     /locus_tag="RHX79_004059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000069745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein TraC"
                     /protein_id="HDV2199172.1"
                     /translation="PINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYG
                     LREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKK
                     SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDP
                     YSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNY
                     SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEA
                     KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRF
                     NHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY
                     RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY
                     KSLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLL
                     QAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTY
                     GQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN
                     VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWG
                     NSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSW
                     HRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLEE
                     HEKYRSVA"
BASE COUNT         1847 a         2385 c         2039 g         1993 t
ORIGIN      
        1 atatgactta gcctgtcata agccccctta taaaaaacca catcactccg gaccataccg
       61 atgacaacac aatacagata aatattcttc tgaacctgtc gaagctcgta acgtccggta
      121 atgcggccgc aactattgaa acaaccagtg ctgcgccctg actcataatt gcaccacaca
      181 gaaaccagag actggcggta agcacatata aacacgcgat attaataaca aggaaaacca
      241 gtgagctcag gagaaacatt ttcctgtcat tacgctcaga aaagaaataa ccggcaataa
      301 tgacaaacat taacagaaca acacctgtaa acattttcaa ataatcttca ctcataaatc
      361 aaatccgcga ttaaaaattg ggtttaaaat cttcagaaac gttcaggaac tgttttgcca
      421 ggtcgtcctg cgaaataaag ccgtatgata acgggcgaac actgccctgt ttcgggtcaa
      481 ccagcatcat ggccgggaaa tatttcacgc cgaggcgctg cgcctgcccc tggtcagtcc
      541 gggaatccgg caacagcgga ttaatcacgc catccacgga aacgggaata acactcagac
      601 catacgtatc ccggaagcca ttaatgacct gcgccagttg cccgtcgatg gggtcctgcc
      661 cccggtaaaa aaacatgatg ccgtagtgtt cagccagttt cgcaatggcc tgtcgctgct
      721 gcgcctggtc tgctgccagc tggttccgta ccgtgccgtt gtaatggctg tactgcaggt
      781 tatagtccag ttcaggatgt gccagcatgg cctttctggc gctcatggtg aaaagcccgg
      841 cctgctgagt ccagtaattt tgcagccgga aatatttcac aaaattatcc acgccgggat
      901 acagaatggc ttcgtacagc gcccgctttg ttgccgtctg cagtgcggcc agtttctgca
      961 taatatccgg ttcctgacgg ggggctgcag gtacaggttt attttctttt tccttcggat
     1021 ttattttctc gttataccac tgccagcctg catcttttcc tgacgccgga aagataaagc
     1081 agcagagtaa cagtggcagt aatgctttat tcatcttcat tcctttcatc actttttctt
     1141 tcatcaggtt tctgcaggtc agtcagggca gaaaaacaaa aatacagaat aaacaggagc
     1201 acaccggagt aaaggataac gaaagcagcg gcaagcatcc cgtctgccgt ggtttctttt
     1261 accgtatccc acgaccagat aattaccgga gaaatgacaa tcgctgtaat caaaagccgg
     1321 ataagaaaat caataaaacg gttcgacgtg aatatgactt tcatcatttc ccccggttat
     1381 ttcccatacc ttactgtcct gcctgtttca gctggtcagc aatctgctct ttcactttct
     1441 gcgtcagaac gccactgtcc gggattttct ggttattcat caggtcttcg tagaagttag
     1501 tgaaatccag tctgttgaac tgaattttct gcagctcatc aaccgtaatc ccccgacagt
     1561 caggatgctt cgcactacca aaactgatac gcaactgacc gttgcgcccc tgctgctgga
     1621 ctatctgcgc cagcttcgaa tcaaactgac agtagctgcg ttttttctcc agacagacac
     1681 ccagcgcttt cttcgaacag aactccccga cgctgacggt cagtttgttt gattttgctt
     1741 tagccagggc cttttcatca ctgctgcatt tggccagccc gatatcctgt ccccagccgc
     1801 tgtccttaca gcagttgctg tatccggctg cagccttctt acaaaatttc gcctgaccgg
     1861 tgaaagcacg gacatccacc ccgttcagcg ccgcaacatc cttacctgct gcggccagtg
     1921 ccgccagctg agaaacggct tcggcaaaat cattactctg cccgctctga gccttatcgc
     1981 attcgccatc gagacagaag acgtctcccc cacagaccat cactttcccg gatgtttttg
     2041 actcacagga gtacgtggca tattcatgca gacaggcacc ttcttcggag taaaaggcac
     2101 actggtgtga caccagggta caggcaggat tgtcggtgta ggtctgacag gttcccttgt
     2161 ctgctgactg cgtgacatac gtgtcccggt atgcccagca gctctggtac atgctgtatg
     2221 actgaccgtc tttcaccagc gtcctgttcc cgccagcctc cgtacattct gtttttgtca
     2281 gtttccccag ctccttgctg aacgggcagc tttcagacca gacaacatac ggggtgtacg
     2341 aggctttttt taccctgaca accagacgca gcttcattgc cgtatgacgt ttgaattttg
     2401 tattcccgac ccggacgggg tgagatgacg taaaagccac accggcagtc agtgttttct
     2461 gtactggtgt aaatgaggca tctgctgagt atttggcatt ccagctcagt ggggttccca
     2521 gtactgtaat tgtcataggt acactcttct gcaggtaagt acgactccag ctgtaatgcg
     2581 catcgacaat ttcaccggta acgggagagg taatggagac aacatactga ccattcactt
     2641 cacgtgcagg tagctgactc atttcatact ccagcgtccg ggtttcccat gtggtactcc
     2701 cctgcagctc catacgggca gttcgtgtgc agtactgctc cacctgtaaa tcccgctcac
     2761 aggtgtaatt cgtgtattca ctcctgctaa tctcctgcgc actgcactgc tgcccggtgt
     2821 ttcccacaat gctgtcagcc cggttcacca catccctgcc ggtctggata aacggtgcat
     2881 ccggtgaaag aatgtctttc ggcttgttca tgaatgactc tgtaatggtt tttccggttt
     2941 caccggtcgc ccattccgtg gtgccgtcat ttttcaggcc gccatccccg ccggcagtca
     3001 cgccaccgta atattttgtc tcgtccggat tcgcgttata gccggggata ctctcctgtg
     3061 gcttaaagcc ctgaatactg ctgcttccct gccctttgat ctggtgagca aaatcagaac
     3121 cggcccggta atcactgttg ctgtcagcct gtgccatgcc ggcaaccaga gccagtatca
     3181 gaggtaaaat acgtttcatt tcccggaatc tcctttccct gccagtaaat catgagccac
     3241 ctgccggcag tcacccgtgg cggccacttt ctccagcgcc tggccgaccc gcaggtttcc
     3301 ccggatgatg tcgtatccct gactgcagaa caccaccagt gccggtacag tgcgaatgcc
     3361 gtactgtgaa aacagcgtcg ggtcgatctg aacaccatca gtcgcgccgt ctttcaccag
     3421 ggacaacaca gcttcagcgg tggtcttcag gtcattgttc accatgcccc gcagtgtggc
     3481 cggaataccg tagtgccggg tttcgcccag cattcgtttc agcccctctt cgggaatgga
     3541 aaacgacaca aaatacagag caccctgccg gggtttcccg tcctgcgaag cctgctgttt
     3601 acgaaccagc tcatccagga aatggttatc tgaacgctga agggggtttt ccagcacctg
     3661 tttctccgcc caggctttca gctgatggtc aggtttttca cgcagttgtc tgcttaaatt
     3721 ttcctgctgc ttcaggaact ggcggttttc aggagtgttc acgttttctg acgccataac
     3781 cgccccgttc agcatcatca gcagtgctgc cagagatttc atactcagct tcatcattca
     3841 cctcacagga agacacagtt acgtttacgc cacatcaggt agccgaagtt tttctttgtg
     3901 ttgggcggat ttttcccggt ttcccagcgg gtcacgctgc gcccgaacgg gtggcactgc
     3961 ccgctgtccg ggtacatatt caccatctgg taacgccagc gttctttggg caggattggg
     4021 gacggatatt cattacagac ggcgttattt ttcccgatgg tttccataat catgccctga
     4081 cggtgcagct tgaacgccat gcgttcactg accagcaggg aggactgcaa cggactggac
     4141 tcattactca cccagccatt gaacgggtac atactgccct gcgaaccggc acaccagaac
     4201 agaacatcga gaggcatatt aaaggcgctg gcaatcgcat ctgctgcaca ggccccctgt
     4261 gctatcggat tggcaaagat gacagcttcc ggattgagaa tggtggtcag gctgctgtcc
     4321 gtccaggtgg ggtcgatttc agaaagataa gcgatatcca ggtcaccacc ttccagacag
     4381 cccagcgatg tgatgatgtt aagccagtac gtcagcgggt atttgtacca gtgaacgtga
     4441 tagaacgccc cgttcacctg cttctcatcc tttttcgccg ttccctgtgc cgttttacca
     4501 aaagccggca ggctgaagcc caggttcacc atgcatcccg gtgatcgggt gacgtccgtc
     4561 agcgccatcg gctcccagta accaatggcc agcccgatac gcctgaacag cggcggcggt
     4621 gccggacaaa tctgaatggg catcgacggg ttcgccgtgt cggggacctt accctgactg
     4681 actttgatac tgcccagcga gagcgggaaa atacagctcc agcagatatc cgtgatcggg
     4741 tttacaaaac gcccctcaca ggcagaatcc gcagacgctg cagggacatg accggcgaga
     4801 aggaataaca tcagcagcca caggcttcgc ttcattttct gccctcctct gccggaataa
     4861 attccacctt caggaagcga tcgccgggaa cggcgctcac ccgtgccggg acctgatcaa
     4921 tgccgaggcg ctggcagagc acaccgttct ggtcaaagta aacacggctg tccagagact
     4981 tctgcatctc cgggatactg ccctgcacga ggataatttt gctctccagt atgggcggcg
     5041 tctggcgttt catccaggcc acctgcgccg gatcatcgcc attgatgaaa tacagcgtct
     5101 ggttaaaagg aacatactgc agcggattca tcacttcacc ctgacgggca aacacccgcc
     5161 cttcgttatc ccggatatcc gcagccagtc tgacggacgg gtcaaacaac cggctgccgt
     5221 atttctccgt gcgtccgata ccgggcacgg cagggggccg cagactgttg cggatcaccc
     5281 gctccttaaa ggcatccatt ttccggccca tctcaccgga ctgctccagt gccgtcaggc
     5341 gctgcatgat caccgtcagc atgtccggct cctttaccgg ccacagatcg ccccaggtac
     5401 caagatcggc ggcggccaca ctctgccccc atatcagcag ggcaatcagc ccccggcatc
     5461 tcatggttcc gccctcattc gccgggcaat atcctgctgg atttcccggg tgatatccgg
     5521 tgccccctgt accacagcag gcgacaccag aatgaccgcg tggtgtttct gctgccacgc
     5581 ctgcaggctg gcttccagtg ccgtgttaaa acgcgctgaa agggcttttg actgcgcttc
     5641 tgacagttgt ttctgactgg cgctgtcaaa aaacgcatcc acggtctgtt tcatgttgaa
     5701 ggcgacagtc accggtgcgt tcagtctgac aatgccgtaa ctgacggctg cgttcagtaa
     5761 caccattgcc aggcatcccg gcaccgtcca ccaccagtgg ctgcgtcgtt ctgccgtgac
     5821 gtcggcgggt ttctgcgttg aactcatgcc acactcctgt atttctcatg ttcttccagc
     5881 caggcttcca gcgaagccat ttccggccct gacttcttcc acgccagctg ccacactgcc
     5941 tcatgaatac tcagcccctc tttacgcttc tgctgcacaa actcaaaatc cgggccgtca
     6001 gagctgtaca tggcgcggct taacgggtcc acaaacagac ggtgccagga ggaatggttt
     6061 tccacctgca gcaggaagga actgaaccac tggtctttgg ccgcaccaaa cttaccaatc
     6121 atgtcgcgct gcagtggcag gaactggtcc ggatacagtt ggttgtattt cgcgaactcc
     6181 ttcgcactct gtttgaggat aattttgtag gaggagttac cccatgccgc gcgggcagca
     6241 ctggaggcct tatcagagtc aaagtcgacg atgttctgtg tgatggtgat ataggcaccg
     6301 gtatgacggc gggccgtacg gtagcccttc tcaataaatt caccgacctt gtgatttttg
     6361 aagtccagca gacgccagcc ttcatcaata acgttcagtt tcttgaggtt acgcggcgtg
     6421 cggtacatcc tgttctcgat gtagataatc agggagaaca tcaccgcaac cagcagtgac
     6481 ggacggtctt ccagtccgcc cagctccagc accaccattt ttgcgtcatc ccgcagggac
     6541 ggctcatcag agttaaaata ctggccgtaa gtgccgttgg cagtgtactg gtcaagcagc
     6601 acaatcattt cgtccagacg gctgcggata gtcggtgact cggcatactg ctcgctgtca
     6661 ctggcgtttt tcaggaaatc caccacgtca tcaatacgtg ctctgttctc tttggccagc
     6721 caggaggctc tgaccgcctg caacagcaga ccttcatgca cttcatccag gttaccgttg
     6781 gggctggcca tcactgacaa ctggtcacgg acacgctccg ctgactggtc aatatcggtg
     6841 atgttcgcaa acgggttaaa acgcagggtt tcaccgtcca gatacacccc gcccatgttc
     6901 tcacacaggg acttgtatcc atcccccatg tcgaacacca cggcaaagcc tccggagtcc
     6961 agcacgctgc ggataagtgg ctgtatcagc ccggttttac cggccccgga ggtgccacag
     7021 accgccatgt tgtagttggt gttattcatc ccccggaaga aaatatcgat aaacgccagc
     7081 tggttacggt aggtgggtgc cagcagacct gccggtgtca gggggttatc cgccactaac
     7141 ggcatcaggt tggcaacatt aaagctctct gcgcgctgaa ccactccggc ctctttcagc
     7201 tgtttaaaca gccctttccc ggccataaag ggcaggcagg tcaggaaatt gcgcatgtgg
     7261 ttaaagcgcg gtgaaatcag ctcaaaaccg tttttacgaa agctgttcag gatgtcctgc
     7321 tccacttcca gtgccgtttc attattgtcc ttgcagaagg ctgtgatgtt gaggaagtag
     7381 gacacgacag aggactgacc ggagcccagc cgctgacgca gttcccccca ctccttcgcc
     7441 tctttctcca cggacggaaa ccatttggca taggaggtct tcgacttttt ctccaggtcc
     7501 atgtacttca ggttggcttc gctgtgggtt ttcacctggt cttccaccac cagagtcagc
     7561 gtcaggatga acggacagga gatggacagt tccgggttca gcaggttgct gtagttgtcg
     7621 gccatgttcc acaggaaggc gatttccggg ttacgggcca gatggaaatt caggatgcgg
     7681 gccgtgctgt tcctgccgtt ctcacgcagg cccagcgtca ggtaatcagc ccggactttc
     7741 agatcaaaac tgtcctccac acactgataa ttcagatcag aatacgggtc cagctgacgt
     7801 cttttcgggt acagggaatc cgggttatgg ttaatcatct ccccgacaat atcgataaag
     7861 gcctgtgcat ccaccgtctg tgtggtgata ctggccccct gtaacgacgc ccggatgatt
     7921 ttcaccaggt tttccatttc cagaatgtcg gcccggcttt ttttcttcga gggagaacag
     7981 tacgagataa acacccggta atggcgcagg gtcaggggca gattcattcc ctccggcagc
     8041 ggaaactgtg tcgctgccgc tttcatataa taggcccggg taatggcgtt aaaccgttca
     8101 gcctgttcac ctgaccagga gaactcacgc agcccgtatt caatcctgtc accaaccagc
     8161 tgactggaca tcagatggat acacaacgga ataccgcgcg gcagtttggt gcgcagcatg
     8221 tgatcgaggg cctccacaat ggactcattc gccccattga tggg
//
LOCUS       DAPGWB010000183         8240 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.185, whole genome shotgun sequence.
ACCESSION   DAPGWB010000183 DAPGWB010000000
VERSION     DAPGWB010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8240
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.185"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            196..4065
                     /locus_tag="RHX79_004060"
     CDS             196..4065
                     /locus_tag="RHX79_004060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001517974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter barrel domain-containing
                     lipoprotein"
                     /protein_id="HDV2199173.1"
                     /translation="MNRIYRVIWNCTLQVFQACSELTRRAGKTSTVNLRKSSGLTTKF
                     SRLTLGVLLALSGSASGASLEVDNDQITNIDTDVAYDAYLVGWYGTGVLNILAGGNAS
                     LTTITTSVIGANEDSEGTVNVLGGTWRLYDSGNNARPLNVGQSGTGTLNIKQKGHVDG
                     GYLRLGSSTGGVGTVNVEGEDSVLTTELFEIGSYGTGSLNITDKGYVTSSIVAILGYQ
                     AGSNGQVVVEKGGEWLIKNNDSSIEFQIGNQGMGEATIREGGLVTAENTIIGGNATGV
                     GTLNVQDQDSVITVRRLYNGYFGNGAVNISNNGLINNKEYSLVGVEDGSHGVVNVTDK
                     GHWNFLGTGEAFRYIYIGDAGDGELNVSREGKVDSGIITAGMKETGTGNITVKDKNSV
                     ITNLGTNLGYDGHGEMNISNEGLVVSNGGSSLGYGETGVGNVSITTGGMWEVNKNVYT
                     TIGVAGVGNLNISDGGKFVSQNITFLGDKASGIGTLNLMDATSSFDTVGINVGNFGSG
                     IVNVSNGATLNSTGYGFIGGNASGKGIVNISTDSLWNLKTSSTNAQLLQVGVLGKGEL
                     NITTGGIVKARDTQIALNDKSKGDVRVDGQNSLLETFNMYVGTSGTGTLTLTNSGTLN
                     VEGGEVYLGVFEPAVGTLNIGAAHGEAAADAGYITNATKVEFGSGEGVFVFNHTNNSD
                     AGYQVDMLITGDDKDGKVIHDAGHTVFNAGNTYSGKTLVNDGLLTIASHTADGVTGMG
                     SSEVTIASPGTLDILASTNSAGDYTLTNALKGDGLMRVQLSSSDKMFGFTHATGTEFA
                     GVAQLKDSTFTLERDNTAALTHAMLQSDSENTTSVKVGEQSIGGLAMNGGTLIFDTDI
                     PAATLAEGYISVDTLVVGAGDYTWKGRNYQVNGTGDVLIDVPKPWNDPMANNPLTTLN
                     LLEHDDSHVGVQLVKAQTVIGSGGSLTLRDLQGDEVEADKTVHIAQNGTVVAEGDYGF
                     RLTTAPGDGLYVNYGLKALNIHGGQKLTLAEHGGAYGATADMSAKIGGEGDLAINTVR
                     QVSLSNGQNDYQGATYVQMGTLRTDADGALGNTRELNISNAAIVDLNGSTQTVETFTG
                     QMGSTVLFKEGALTVNKGGISQGELTGGGNLNVTGGTLAIEGLNARYNALTSISPNAE
                     VSLDNTQGLGRGNIANDGLLTLKNVTGELRNSISGKGIVSATARTDVELDGDNSRFVG
                     QFNIDTGSALSVNEQKNLGDASVINNGLLTISTERSWAMTHSISGSGDVTKLGTGILT
                     LNNDSAAYQGTTDIVGGGNCFRFRLCY"
     gene            4067..5617
                     /locus_tag="RHX79_004061"
     CDS             4067..5617
                     /locus_tag="RHX79_004061"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDV2199174.1"
                     /translation="MASQHINIHNSGVMSGNVTTAGDVNVMPGGTLRVAKTTIGGNLE
                     NGGTVQMNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTR
                     VRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWY
                     LTSKWDGVTPPDTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLG
                     EPQYIDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQ
                     DRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWA
                     LYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEETLNTWYVQPQAQIT
                     WMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWI
                     NNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQG
                     MLGVKYSW"
     gene            5826..6092
                     /gene="hipB"
                     /locus_tag="RHX79_004062"
     CDS             5826..6092
                     /gene="hipB"
                     /locus_tag="RHX79_004062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HipB"
                     /protein_id="HDV2199175.1"
                     /translation="MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISN
                     FENNPDNTTLTTFFKILQSLELSMTLCDTKNASPESTEQQDLEW"
     gene            6092..7414
                     /gene="hipA"
                     /locus_tag="RHX79_004063"
     CDS             6092..7414
                     /gene="hipA"
                     /locus_tag="RHX79_004063"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system serine/threonine
                     protein kinase toxin HipA"
                     /protein_id="HDV2199176.1"
                     /translation="MPKLVTWMNNQRVGELTKLANGAHTFKYAPEWLASRYARPLSLS
                     LPLQRGNITSDAVFNFFDNLLPDSPIVRDRIVKRYHAKSRQPFDLLSEIGRDSVGAVT
                     LLPENETITRPIMAWEKLTEARLEEVLTAYKADIPLGMIREENDFRISVAGAQEKTAL
                     LRIGNDWCIPKGITPTTHIIKLPIGEIRQPNATLDLSQSVDNEYYCLLLAKELGLNVP
                     DAEIIKAGRVRALAVERFDRRWNTERTVLLRLPQEDMCQTFGLPSSVKYESDGGPGIA
                     RIMAFLMGSSEALRDRYDFMKFQVFQWLIGATDGHAKNFSVFIQAGGSYRLTPFYDII
                     SAFPVLGGTGIHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPEVQMHEIL
                     SDFARMIPAALDNVKTSLPTDFPENVVTAVETNVLRLHGRLSREYGSK"
     gene            7726..7934
                     /locus_tag="RHX79_004064"
                     /pseudo
     CDS             7726..7934
                     /locus_tag="RHX79_004064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226947.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            7955..8179
                     /locus_tag="RHX79_004065"
                     /pseudo
     CDS             7955..8179
                     /locus_tag="RHX79_004065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310140.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
BASE COUNT         2241 a         1759 c         2265 g         1975 t
ORIGIN      
        1 tcatttttaa ataaaataag aactatgcat tttttaatct atcaattcga aagtattagc
       61 aaattagcca aattgacacc ttcccacctc caactaacac tcaatacaga cctctgacaa
      121 tttaataagt ttcattttta atgtctgacg actcatctct ttcgtggctg tattgtttgt
      181 atatggagcg tttatatgaa tagaatctat cgcgtgatat ggaattgcac tctacaggta
      241 tttcaggcct gctcggaatt aactcgcagg gcaggtaaaa catcgacggt taatttgcgt
      301 aaatcctctg gactgacaac gaaattcagt agattgacgc tgggtgtttt gctggcacta
      361 agcggttcag cgtctggtgc aagtctggaa gttgataatg atcagattac caatattgat
      421 actgatgttg cttatgatgc ctacctggtt ggctggtatg gcactggagt gcttaatatt
      481 ttggctggcg gtaatgcctc cttaaccact attactacca gcgtcattgg cgctaatgag
      541 gactcagagg gcaccgttaa tgttttgggt ggcacctggc gattgtatga tagcggaaat
      601 aatgcaaggc ctttaaatgt gggtcaatcc ggaacgggga cgctgaatat taaacagaag
      661 ggtcacgtcg atggaggcta tttaagatta ggttcttcga caggaggcgt cgggacggtc
      721 aatgttgagg gagaggactc tgttctgacg accgaattat tcgaaatagg gagttacggt
      781 acgggctcat taaatattac ggataagggt tacgtcacga gttcaatcgt cgccatttta
      841 ggctatcagg cgggcagtaa tggccaggtt gtcgttgaaa agggtggcga gtggctaata
      901 aaaaataacg attcctcaat tgaatttcaa attggtaatc aagggatggg ggaagcgact
      961 attcgcgagg gggggctggt tacggctgaa aatacgatta tcggtggcaa tgccaccggt
     1021 gtcggaaccc tgaatgtgca ggatcaagac tctgtcatca cggtacgcag actctataat
     1081 ggatatttcg gtaatggcgc agtcaatatt tccaataatg gactaattaa taacaaagaa
     1141 tattcattgg tgggcgttga agacggttcc cacggtgtcg tcaacgtgac cgataaaggg
     1201 cattggaatt tcctcggaac gggcgaagct ttccgctata tctatatcgg tgatgctggc
     1261 gacggtgaac ttaatgtctc gcgtgaaggt aaagtagatt cgggaattat cactgcgggg
     1321 atgaaagaaa caggcacagg caacattact gttaaggata agaactccgt tatcactaat
     1381 ctcggaacta atcttggtta tgacggccac ggcgaaatga atatcagtaa tgaagggctt
     1441 gttgtcagca acggaggaag ctcactcggt tatggagaaa ccggcgtcgg gaatgtcagc
     1501 atcaccacgg gggggatgtg ggaggtcaat aagaatgtct ataccaccat tggtgttgcg
     1561 ggcgtcggaa acctcaatat tagcgatggc ggtaagttcg tatcgcaaaa tattactttt
     1621 ttgggcgata aagcaagcgg tatcggcaca ctgaacctga tggatgcgac atcatcgttc
     1681 gatactgtgg gtatcaatgt cggtaatttt ggtagcggta tcgtaaatgt cagtaatggt
     1741 gccaccctta attcaacggg ctatggattt atcggaggaa atgcctccgg taaggggata
     1801 gttaatattt caacggacag tctctggaat ttaaagacat catctactaa cgcacaattg
     1861 ctacaggtcg gtgtattagg caagggtgaa ctgaatatta ccaccggagg tatagttaaa
     1921 gcgcgtgata cacagatagc tctcaatgac aaaagtaagg gcgacgtgag ggtggatggg
     1981 cagaactctc ttcttgaaac attcaatatg tacgtaggga catctggtac gggtacgtta
     2041 accctgacga atagcggcac gctgaatgtc gaaggtggag aagtttactt aggtgttttt
     2101 gaacctgctg taggaacgct aaacattggt gcagctcacg gtgaggcggc ggcagatgcc
     2161 gggtatataa ccaacgcgac gaaagtagag tttggttctg gcgaaggtgt ttttgtcttt
     2221 aatcatacta ataacagtga tgccggctac caggtcgata tgctgattac gggtgacgat
     2281 aaagacggaa aagtgatcca tgatgcaggc catacggtgt tcaatgcagg gaatacttat
     2341 agcggtaaaa cgctggtcaa tgacggcctc ctgaccattg cgtctcatac ggcagatggg
     2401 gtaacgggca tgggttcgag tgaagtcacc attgcaagcc ccggtacgct cgacattctc
     2461 gcatcaacga acagtgcagg agattacacg ctgaccaatg cgctcaaagg cgatggtttg
     2521 atgcgagtgc agctgtcatc ctccgacaag atgtttggct ttacccatgc aacagggact
     2581 gaattcgccg gtgttgccca actgaaagac agtaccttca ctctggagcg cgacaacacc
     2641 gctgcgctta ctcacgcgat gttgcagtct gacagtgaaa ataccacatc ggtaaaagtg
     2701 ggagagcaat ccattggtgg actggccatg aatggtggta cgctcatttt cgatacggat
     2761 attcctgctg cgacgcttgc agagggatat atcagcgtcg atacgctggt tgtcggcgcg
     2821 ggtgactaca cctggaaagg ccgtaactat caggtaaacg ggacgggcga cgtgcttatc
     2881 gacgtgccta aaccgtggaa tgatcccatg gcgaataacc ctctgacgac gctcaatttg
     2941 ctggaacacg acgatagcca tgtcggcgtt caactggtga aggcgcaaac ggttattggg
     3001 tcgggtggct cattaacgtt acgtgattta cagggcgacg aggtggaagc ggacaaaacg
     3061 gtacacattg cgcaaaacgg aacggtggtc gccgagggtg attatggatt ccgcctcacg
     3121 accgcaccag gtgatggttt gtacgttaac tatgggctga aagcgctgaa catccatggt
     3181 gggcaaaagc tgacgttagc cgaacatggc ggagcctatg gcgcaacggc cgatatgtcg
     3241 gcaaaaatcg gtggtgaagg ggatctggca atcaatacgg tgcgacaggt ttcgctttcc
     3301 aacggtcaga acgactatca gggggcaacc tacgttcaga tggggacatt acgtaccgat
     3361 gcggatggtg cacttggcaa cacccgggaa ctgaacatca gcaacgcggc catcgtcgat
     3421 cttaatggat cgacgcagac ggtagagaca ttcaccgggc agatgggttc gactgttttg
     3481 ttcaaagagg gggcgctgac ggtaaataaa ggtgggatca gtcagggtga actgacaggt
     3541 ggcggaaacc tgaatgttac agggggaacg ctggctatcg aggggcttaa tgcacgctac
     3601 aatgcgttaa ccagcattag cccaaatgcg gaagtcagcc tcgataatac tcaggggtta
     3661 ggcagaggaa atattgccaa tgacggtctg ttaacgctaa aaaacgtgac tggcgaactg
     3721 cgtaatagca taagcgggaa gggtatcgtg agcgcaaccg ccaggacaga tgtagagctg
     3781 gatggcgata atagccgctt tgtggggcaa ttcaacattg atacaggcag cgcgctcagc
     3841 gtcaacgagc agaaaaacct gggtgatgct tccgttatca ataatggcct gctcaccatc
     3901 tccactgagc gtagctgggc gatgacgcac agtatcagcg gtagcggtga tgtgacaaaa
     3961 ctgggtaccg ggatcctgac tcttaacaac gattccgcgg cgtatcaggg tacgacggat
     4021 atcgtggggg ggggaaattg ctttcggttc cgactctgct attaatatgg caagtcaaca
     4081 cattaatatc cataacagcg gtgtgatgtc gggaaatgtc accactgcag gtgatgtgaa
     4141 cgttatgcct ggggggacac tgcgtgtcgc taaaaccaca atcggcggca acctggagaa
     4201 tggcggcacg gttcaaatga atagcgaagg ggggaaaccg gggaatgtac tgaccgttaa
     4261 cggcaactat accggaaaca atggcctgat gacgttcaac gcgacgctgg gcggcgataa
     4321 ttcgcccacc gataaaatga acgtgaaagg cgatacccaa gggaacactc gcgttcgggt
     4381 tgataacatt ggcggcgtcg gtgcacaaac ggtcaacggt attgaactca ttgaggttgg
     4441 cggtaattct gcaggtaact tcgcgctgac caccggaact gtcgaagctg gggcttacgt
     4501 ctacacgctg gctaaaggga aggggaatga cgagaaaaac tggtatctga ccagtaaatg
     4561 ggacggcgta acgccaccgg atacgcccga ccccatcaat aatccccctg ttgtggatcc
     4621 ggaaggccca tcagtttatc gcccggaggc cggaagctat atcagcaaca ttgccgcagc
     4681 caactcgctg tttagccatc gtttacacga ccgtctgggt gagccgcagt atatagattc
     4741 actgcattct caggggtcgg caagcagtat gtggatgcgt catgtcggag ggcacgaacg
     4801 ttcaagggcc ggtgacggtc agctaaatac tcaggctaac cgctatgtat tgcagctagg
     4861 cggcgatttg gcgcagtgga gtagcaacgc gcaggatcgc tggcatcttg gcgtgatggc
     4921 aggttacgct aatcagcaca gtaatactca gagtaatcgt gtgggttata aatcggatgg
     4981 gcgcatcagc ggttacagcg ctgggctgta cgcgacctgg tatcagaacg atgcgaataa
     5041 gaccggcgct tatgttgaca gctgggcgct gtataactgg tttgataaca gcgtcagttc
     5101 cgataaccgt tctgctgacg actatgattc tcgcggtgtg acggcctctg ttgagggtgg
     5161 gtataccttt gaagcgggaa catttagcgg cagcgaagag acgctgaata cctggtacgt
     5221 ccagccacag gcgcaaatca cctggatggg tgtgaaagat tccgaccata cccggaaaga
     5281 cggaacgcgc attgaaacgg aaggcgacgg aaatgtgcaa acgcgacttg gggtgaaaac
     5341 ctacctgaac agccatcacc agcgtgacga tggtaaacag cgtgagttcc agccttacat
     5401 tgaagcgaat tggatcaaca acagcaaagt ctacgccgtg aagatgaatg gtcaaaccgt
     5461 aggccgtgaa ggtgcgcgta atctcggtga agtacgtacc ggggttgagg cgaaagtaaa
     5521 taacaacctt agcctgtggg ggaatgtcgg tgtgcaacta ggtgataaag gctatagcga
     5581 tactcagggc atgctgggag tgaaatatag ctggtaaacc gtataagccg catgtcgaga
     5641 tggcatgcgg cttaatattg ccgacttcaa aggctttaaa gcctcccttt tatccgcgat
     5701 cgcggatatc gcagcattta tcccgtacag cggataagat gtgtttccag attgacttta
     5761 tcctcactaa aggataaaac tgataatatc cccttaagcg gataaatttg ctgtggacgt
     5821 atgacatgat gagctttcag aagatctata gcccaacgca attagcgaat gcaatgaaac
     5881 tggttcgcca gcaaaatggc tggacgcaga gcgagctggc gaaaaaaatt ggcattaagc
     5941 aggcgacaat ttccaatttc gaaaacaacc ctgacaatac cacgctcacg acatttttta
     6001 agattttaca gtcgcttgaa ctctcaatga cactatgcga cacgaaaaat gcctcgccag
     6061 aatcaacaga acagcaagat ctggagtggt aatgcctaaa cttgtcactt ggatgaacaa
     6121 ccagcgggta ggcgagttaa cgaagttagc caacggcgcg cacaccttta agtatgcacc
     6181 ggagtggtta gccagccgtt atgccagacc gttgtcactt tcgctgccat tgcagagggg
     6241 gaatatcacc tcagatgccg tatttaactt cttcgataac ctgttacccg atagcccgat
     6301 tgtacgtgac cggatcgtta aacgttatca tgctaaatcc agacaaccgt ttgatttatt
     6361 gtcagaaata gggcgagaca gcgttggtgc cgtaacgtta ttacccgaaa atgaaaccat
     6421 aacgcgcccg ataatggcat gggaaaagct tactgaagcc aggcttgaag aagtattaac
     6481 ggcttataaa gcagatatcc ctctgggcat gattagagaa gaaaatgact ttcgcatctc
     6541 ggttgctggc gcgcaggaga agacagcgct gcttagaata ggcaatgact ggtgcattcc
     6601 gaaaggaata acgccgacga cgcacatcat taaattaccg attggcgaaa tcaggcagcc
     6661 caatgcgacg ctcgatctca gccaaagcgt tgataatgag tattactgtc tgctgctggc
     6721 gaaagaactt gggttgaatg ttccggacgc agaaatcatt aaagcgggaa gggtgcgcgc
     6781 gttagcggtc gaacgttttg acaggcgttg gaatactgag cgaacggttt tacttcgctt
     6841 gccacaggag gatatgtgtc agacattcgg tttaccttca tctgtgaaat atgaatcaga
     6901 tggaggccca ggcatcgcgc ggatcatggc gtttttgatg gggtccagcg aggcgcttcg
     6961 cgatcgttat gattttatga aattccaggt cttccagtgg ttgattggcg caacggatgg
     7021 ccatgcaaaa aacttctccg tatttattca ggctggcggc agttatcgac tcacgccatt
     7081 ttacgacatc atttcagcat ttccggtcct tggcggtacg ggaatacaca tcagcgatct
     7141 caaactggca atggggctta acgcatccaa aggcaaaaaa acggcaatcg ataaaattta
     7201 tccgcgacat tttttggcga cagcaaaggt gctgagattc ccggaagtgc agatgcatga
     7261 aatcctaagt gactttgcca gaatgattcc ggcagcactg gataacgtga agacttcatt
     7321 accgacagat tttccggaga acgtggtgac ggcagttgaa accaatgtgt tgaggttgca
     7381 tggacggtta agccgagaat acggtagtaa gtgagatatg gggtttggtc gttgttaatg
     7441 agcacgacaa tcatgaccgc caacgactgg attcttcctt ggtttatact ggtgcgcata
     7501 atgtatatta tgttaaatca tgtctgagtg atgcgaagtg cttttctggt agtcgttatt
     7561 cgttcagggt tcaagaactt aagcctctcc tctttcataa ttggcctgtg catggagaaa
     7621 tagcctggtt attccctgcc ccatgctaag agcgcagtgt ctgtcgcata gacactgcat
     7681 acgaaaacac cagagggtgc tgttacttat ttaaggacgg atcaagcggg aatgagtcca
     7741 ctccggtatc agaaatggct acgtctcaat gaagtcaggc gaccgatgct gaatgaacat
     7801 tacgatgtca ccacagcagc ctatgctgtc ggttacgaaa gctaccccat ttcagtcggg
     7861 aatattcgcg gatgtttgga gagtcaccca agagagatat taccaggtta agaaagtctg
     7921 tcggtcagct ttaataaacc ctgcacttat ctggttagcg ctgcagagtt cagcggcagg
     7981 ctctgcccaa aatgtcggta tccaaatttt ggaccgtacg ggtgaggtat taatacttga
     8041 tggtgccact tttagcgcta aaactgactt gattgatggc acgaatatac tgccgttcca
     8101 ggctcgttat attgcactcg ggcagtccgt agctggtact gcaaacgcag atgcgacctt
     8161 caaagttcaa tatctataat tcaatattaa ggtggctata cgtcatctga aattgaaaca
     8221 gggtgtgtgt ggcatggcta
//
LOCUS       DAPGWB010000184         8185 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.186, whole genome shotgun sequence.
ACCESSION   DAPGWB010000184 DAPGWB010000000
VERSION     DAPGWB010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8185)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8185)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8185
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.186"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..329
                     /locus_tag="RHX79_004066"
     CDS             <1..329
                     /locus_tag="RHX79_004066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199177.1"
                     /translation="SPLFIEIEDNLRTFNTNELTRKDNIFILFSSADDGPVMVVSSQR
                     LHDMLNPTKDTNWNSTCIYKSRHKMLPINLTQETLFSSKSHGKYALFPIFTASWRATR
                     IKNIGI"
     gene            552..1049
                     /gene="ubiC"
                     /locus_tag="RHX79_004067"
     CDS             552..1049
                     /gene="ubiC"
                     /locus_tag="RHX79_004067"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709881.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HDV2199178.1"
                     /translation="MSHPALTQLRALRYFKEIPALDPQLLDWLLLEDSMTKRFEQQGK
                     TVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSG
                     PELALQKLGKTPLGRYLFTSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLP
                     ASPLY"
     gene            1062..1934
                     /gene="ubiA"
                     /locus_tag="RHX79_004068"
     CDS             1062..1934
                     /gene="ubiA"
                     /locus_tag="RHX79_004068"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HDV2199179.1"
                     /translation="MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVP
                     QLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVV
                     LVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAA
                     VSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIL
                     QIGVLALMAIIGELNGLGWGYYWSIVVAGALFVYQQKLIANREREACFKAFMNNNYVG
                     LVLFLGLAMSYWHF"
     gene            complement(2089..4512)
                     /gene="plsB"
                     /locus_tag="RHX79_004069"
     CDS             complement(2089..4512)
                     /gene="plsB"
                     /locus_tag="RHX79_004069"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HDV2199180.1"
                     /translation="MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYV
                     LPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESI
                     KLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG
                     RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFN
                     KLLASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWN
                     RLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGIN
                     LNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTG
                     RLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLP
                     QMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNI
                     AADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDST
                     VPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMA
                     AIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQ
                     DDELHINPAHSRTLQLLAAGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLS
                     VLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLT
                     IESATQGEG"
     gene            4683..5051
                     /gene="dgkA"
                     /locus_tag="RHX79_004070"
     CDS             4683..5051
                     /gene="dgkA"
                     /locus_tag="RHX79_004070"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDV2199181.1"
                     /translation="MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVV
                     IACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAV
                     LIAIIVAVITWCILLWSHFG"
     gene            5161..5769
                     /gene="lexA"
                     /locus_tag="RHX79_004071"
     CDS             5161..5769
                     /gene="lexA"
                     /locus_tag="RHX79_004071"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000646075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HDV2199182.1"
                     /translation="MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAE
                     EHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDP
                     SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKK
                     QGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL"
     gene            5842..7167
                     /gene="dinF"
                     /locus_tag="RHX79_004072"
     CDS             5842..7167
                     /gene="dinF"
                     /locus_tag="RHX79_004072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter DinF"
                     /protein_id="HDV2199183.1"
                     /translation="MAFLTSSDKALWHLALPMIFSNITVPLLGLVDTAVIGHLDSPVY
                     LGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQALARALVQPLLLALGAGAL
                     IALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARA
                     PVILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGI
                     SGEMLKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTL
                     LTFTAYALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGE
                     HIIALLTSLTQIQELADRYLIWQVILPLVGVWCYLLDGMFIGATRAAEMRNSMAVAAA
                     GFALTLLTLPWLGNHGLWLALTVFLALRGLSLAAIWRRHWRNGTWFAAT"
     gene            7283..7492
                     /locus_tag="RHX79_004073"
     CDS             7283..7492
                     /locus_tag="RHX79_004073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HDV2199184.1"
                     /translation="MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQ
                     ERYGYQKDQAEKEVVDWETRNEYRW"
     gene            complement(7534..8049)
                     /gene="zur"
                     /locus_tag="RHX79_004074"
     CDS             complement(7534..8049)
                     /gene="zur"
                     /locus_tag="RHX79_004074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc uptake transcriptional repressor Zur"
                     /protein_id="HDV2199185.1"
                     /translation="MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISA
                     YDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFI
                     CDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQH
                     DHSVQVKKKPR"
BASE COUNT         1845 a         2004 c         2240 g         2096 t
ORIGIN      
        1 tttcacctct atttatagaa attgaagata atttaagaac ctttaacacg aatgaattaa
       61 cacgaaagga taatatcttt atcctgttct cctctgccga tgatgggcca gttatggtgg
      121 taagctccca gcgcttacat gatatgttga atcctacaaa agataccaat tggaattcca
      181 cgtgtatcta taaatccaga cataagatgt tgcctattaa tcttactcag gaaacacttt
      241 ttagctccaa atctcatggt aaatatgcgc ttttcccaat ttttactgcg agttggcgag
      301 ctactcgtat aaagaatata ggtatttaag taaaggaaaa catcaccgtt cctggcatca
      361 tgggcggtga tgcccctacg gttgccctcg ccagcacggg catcggcaaa gcgtaaggtt
      421 caacagcggt ttaccacttc atgcgattgt tgcgtttttg ttgcgcatta gatcacttaa
      481 tttgctttac atctcccgta aacacttttc tgcgatacaa tgcctttacg ttatgtaacg
      541 gagagttcgg catgtcacac cccgcgttaa cgcaactgcg tgcgctgcgc tattttaaag
      601 agatccctgc cctggatccg caactgctcg actggctgtt gctggaggat tccatgacaa
      661 aacgttttga acagcaggga aaaacggtaa gcgtgacgat gatccgcgaa gggtttgtcg
      721 agcagaatga aatccccgaa gaactgccgc tgctgccgaa agagtctcgt tactggttac
      781 gtgaaatttt gttatgtgcc gatggtgaac cgtggcttgc cggtcgtacc gtcgttcctg
      841 tgtcaacgtt aagcgggccg gagctggcgt tacaaaaatt gggtaaaacg ccgttaggac
      901 gctatctgtt cacatcatcg acattaaccc gggactttat tgagataggc cgtgatgccg
      961 gactgtgggg gcgacgttcc cgcctgcgat taagcggtaa accgctgttg ctaacagaac
     1021 tgtttttacc ggcgtcaccg ttgtactaag aggaaaaaaa tatggagtgg agtctgacgc
     1081 agaataagct gctggcgttt catcgcttaa tgcgtacgga taagccaatt ggcgcgttac
     1141 tgctgctctg gccaacatta tgggcgttgt gggtggcgac accgggcgtt cctcagctct
     1201 ggatcctggc ggtatttgtc gcgggtgtct ggctgatgcg cgctgctgga tgtgtggtga
     1261 atgattatgc tgaccgaaag tttgatggtc atgttaagcg cacggcgaac cgaccacttc
     1321 ccagcggcgc ggtaacagag aaagaggcgc gcgcactgtt tgtagtgctg gtactgattt
     1381 cgtttttact ggtactgacg ctgaatacga tgaccattct gttgtcgatt gccgctctgg
     1441 cgttggcgtg ggtgtacccg tttatgaagc ggtataccca tctcccgcaa gtggtgctgg
     1501 gcgcggcgtt tggctggtcg attccaatgg cttttgccgc tgtgagtgag tcggtgccat
     1561 tgagttgctg gttaatgttc ctcgccaata ttctctgggc ggtggcttac gacacgcagt
     1621 atgcgatggt tgaccgcgat gatgatgtga agattggcat taaatccacg gcaatcctgt
     1681 tcggccaata cgataaattg attattggta ttttgcagat tggcgtactg gcactgatgg
     1741 cgatcatcgg tgagttaaat ggcttaggct ggggatatta ctggtcaatt gtggtggctg
     1801 gcgcgctgtt tgtttatcaa caaaaactga ttgccaaccg cgagcgtgaa gcctgcttta
     1861 aagcatttat gaataataac tatgttggtc tggtactatt tttagggctg gcaatgagtt
     1921 actggcattt ctgatgatgt aaaaaagccg gatgatcatc cggctttctt ctgggttgcc
     1981 tgatgcgcgg cgcttctcag gcctacacaa cacatcgcaa tttattgaat ttgcagatta
     2041 tggaaggccg gataaggcgt tttcgccgca tccggcaatt ctctctgatt acccttcgcc
     2101 ctgcgtcgca ctctcaatcg tcaaacgcac gtctgatgta atcaactccg ccagcaactg
     2161 ataaaccttc atcgtttctg ccggttcggc gtcgccgcta tcgctgatat acccttcatc
     2221 acgcagcgtc agcaccagag aactgaacac cgccttgtcg aagaactccg gcgcgttgat
     2281 gccgtgcagc acggagagac gttgcgcgac ggtgcggctc tctttctcca gcgtaccgcg
     2341 gttgatcgac gggttggcac tcaacaacca gaaggtgatg gcataacgtt gcagcgtttc
     2401 gcgcgcgcct gcggccagca gctgtagggt gcgagaatgc gccgggttga tatgcaactc
     2461 atcatcttgc agggtaatca gcccctgacg ttgcatctca tttgccagcg catcaataac
     2521 gtccggcaac tcgtcgcgat cccagcgcag gaacagctcc gctttcagca ttgggtaaag
     2581 cacattgacg tgctccatca atacgtcgcg ggagatgtgg cgatgctggg tgacaattgc
     2641 cgccatcagc gaaggcagca ccaacatatg cgcaatgttg ttgcgatagt aggtcatcag
     2701 caccgcttgc tcgcgtggca gaatgatgat gtcgccgata gtgtctttct cgacttcaaa
     2761 cttgttcatt tgcagcgcgt gatcgataag ctcgctggcg ctggctgaag gaacggtaga
     2821 gtccgtggag taaggtacgt tgcgcatcag atccaggtag cagttgagtt gctcggttaa
     2881 ctgctcgcgg gtgagtgagc gctgacgtga tgccagtagc gcagtacagc acaggttcat
     2941 ggcgtttgcc gcgcctgcgt tgttaatgcg taccatcaga tcggcagcaa tattattgac
     3001 cgtcggcgtt aaccaggccg gacgcaccgc ttcgatggga tcgatagatt cacgccagtc
     3061 tggtacgtgc tggttaaggt aggtcatcaa cggcattggt tcaccgaagt tgacgtaacc
     3121 ctgaccgaga ttacgcagct tgcttaaacc gcgcagcatc tgcggcaggc tctctttctc
     3181 tttcgtcgcg ccgcgcagtt ctttggcgta agtacccact tccatgacgt gctcataacc
     3241 gatatagatc ggaatcagcg taatcggacg cgtgccgcca cgcagcatcg cctgaatggt
     3301 catcgacagc gtaccggttt tcggatccag caaacgcccc gtgcgggaac gaccgccttc
     3361 cacgaagtac tcgacggaat aaccacggct gaacagttcg ccgagatact cacggaaaac
     3421 ggtggaataa agtttattgc ctttaaaagt acggcgaata aagaacgccc ccagacggcg
     3481 gaaaatcggc ccggccggcc agaagttcag gttgatcccg gcggcgatat gcggcggcac
     3541 cagcccctgg tggtacagca cgtaagaaag tagcaggtag tccatgtgac tgcggtggca
     3601 aggcacatac accagctcat gaccgtcgtg ggccagctgg cgaacgcgct cggcgttatg
     3661 gacgttgatg ccctgataaa gtcggttcca ggtgaagccc agaatgcggt cagtcaggcg
     3721 gatcatctcg taagagaaat tcgccgcaat ctcttccatc agcgcaatcg cgttctgctg
     3781 cgctttttca tgggagattt ttttgctgcg cgcttcatct tctaccgctt tggcaatggc
     3841 gcgggaggcg agcagcttat taaacagatc ctgacgagca ggcagacgtg ggcccacagc
     3901 agccagacgt tgacgggcaa agtgcatacg cgccacgcgc gccagtttct gtgcgatagt
     3961 tttatccgtg ccgtgttcat ccgccatacg gcgcagcgaa actgacggcg agaaacgcac
     4021 aaaactgtcg cgaccgagcc acagtacggc gaaaaatttc tgtacgccgt taagcatacg
     4081 cagcggcggg tttacttcgc ctttttcacg ccccggcgcg cgaccaaaca tcaccgatac
     4141 tggcaccatc tgcacatcca gatttgggtt gctacggtgc aaatcgagat agtcgtggaa
     4201 cagcttaata gactcttctt tcggcgtgta ataggtgaat acacgcggcc cgccgtgaat
     4261 gaacacatag cgcggcagta gcgtgccgtc gatttccagc ggctctaacg ggtcaggcaa
     4321 gtcatgagcc agacactggg cgcgtaacgt cagcaaatct gctttcgagt tgtacggtaa
     4381 aacgtacata attggacgag aagtatccag ccccagttcc ggggcaggat ctgccggaat
     4441 agacttgctt tttaccagga tgcttaatgg taaattcagt aatttgtagt aaattcgtgg
     4501 ccagccggac ataaacgatg taaagcctct ggttaataat gcaaatgcgc ggcaaggata
     4561 gcagaaagtc atgggaaatt ctgtggtatc cgctcatgtt tcgcgcggcg ttacgcaaac
     4621 ccgaatcatc ggatttaacg gtacactgat attgacgctc ataatgtaaa aaggttcttt
     4681 caatggccaa taataccact ggattcaccc gaattatcaa agctgctggc tattcctgga
     4741 aaggtttacg cgctgcatgg atcaacgaag cggcattccg tcaggaaggc gtagcggtat
     4801 tgttggcggt ggtcatcgcc tgctggctgg atgtggacgc aattacccgc gtgctgctta
     4861 tcagctccgt gatgctggtg atgattgtgg aaatcctcaa tagcgccatc gaagcagtgg
     4921 ttgaccgaat tggctctgaa taccatgagc tttccggacg cgcaaaagat atgggatccg
     4981 ccgcggtgct gattgccatt atcgtcgccg tgattacctg gtgcatcctg ttatggtcgc
     5041 attttggata acccttccag atttcgataa atctctggtt tattgtgcag tttatggttc
     5101 caaaatcgcc ttttgctgta tatactcaca gcataactgt atatacaccc agggggcgga
     5161 atgaaagcgt taacggccag gcaacaagag gtgtttgatc tcatccgtga tcacatcagc
     5221 cagacaggta tgccgccgac gcgtgcggaa atcgcgcagc gtttggggtt ccgttcccca
     5281 aacgcggctg aagaacatct gaaggcgctg gcacgcaaag gcgttattga aattgtttcc
     5341 ggcgcatcac gcgggattcg tctgttgcag gaagaggaag aagggttgcc gctggtaggt
     5401 cgtgtggctg ccggtgaacc gcttctggcg caacagcata ttgaaggtca ttatcaggtc
     5461 gatccttcct tgttcaagcc gaatgctgat ttcctgctgc gcgtcagcgg gatgtcgatg
     5521 aaagatatcg gcattatgga tggtgacttg ctggcagtgc ataaaactca ggatgtacgt
     5581 aacggtcagg tcgttgtcgc acgtattgat gacgaagtta ccgttaagcg cctgaaaaaa
     5641 cagggcaata aagtcgaact gttgccagaa aatagcgagt ttaaaccaat tgtcgttgac
     5701 cttcgtcagc agagcttcac cattgaaggg ctggcggttg gggttattcg caacggcgac
     5761 tggctgtaac atatctctga gaccgcgatg ccgccaggcg tcgcggtttg tttttcatct
     5821 ctcttcatca ggcttgtctg catggcattc ctcacttcat ctgataaagc actctggcat
     5881 ctcgccttac ccatgatttt ctccaatatc accgttccgt tgctgggact ggtcgatacg
     5941 gcggtaattg gtcatcttga tagcccggtt tatttgggcg gcgtggcggt tggtgcaacg
     6001 gcgaccagct ttctctttat gctgttgctg tttttacgca tgagcaccac cgggctgact
     6061 gcgcaggctt atggtgccaa aaatcctcag gcattagccc gtgcgctggt gcaaccgttg
     6121 ctgttggcgt tgggggctgg ggcgttaatt gcgctgctgc gtacaccgat tatcgatctg
     6181 gcgctgcata ttgttggcgg tagtgaagcg gtcctggaac aggcgcggcg ctttcttgaa
     6241 atccgctggt taagcgctcc ggcgtcgctg gcgaatctgg tattactcgg ttggttactc
     6301 ggcgtgcaat atgcccgtgc gccagtaatt ttgttagtgg tcggcaatat cctcaacatt
     6361 gtgctggatg tctggctggt gatggggctg catatgaacg tgcagggcgc ggcgctggcg
     6421 acggttattg cggaatatgc aacattgctg attggtctgc taatggtgcg taaaatcctc
     6481 aaactacgcg gaatttccgg cgaaatgctg aaaactgcct ggcgaggaaa cttccgtcgc
     6541 ttgctggcgc ttaaccgcga tatcatgctg cgttcgctgt tgttgcaact ctgtttcggc
     6601 gcgatcaccg tacttggtgc gcgactgggg agtgacatta tcgctgttaa cgcggttctg
     6661 atgacgctac tcacctttac cgcctatgcg ctggatggtt ttgcctacgc ggttgaagca
     6721 cattccggtc aggcatacgg tgcgcgcgac ggtagccagt tgctggatgt ctggcgggca
     6781 gcgtgccgcc agtcggggat cgtagcgcta ctgttttcgg tggtttattt gctggcaggg
     6841 gaacacatca ttgcgttact gacgtcgtta acccagattc aggagctggc cgaccgctat
     6901 cttatctggc aggtgatttt gccgttggtt ggcgtctggt gttatctgct ggacggcatg
     6961 tttataggcg caacgcgtgc cgccgaaatg cgtaacagta tggcggtggc cgccgcaggt
     7021 tttgcgctga cgctccttac gctgccgtgg ctgggtaatc atggtttgtg gctggcatta
     7081 accgtctttc tggcgttgcg cgggctttct ctggcggcta tctggcggcg tcactggcgc
     7141 aacggtacct ggtttgccgc aacgtgacgg ttaaaaattc tgaataaatt atcctaagcc
     7201 aaattgctga ctacacttaa tctcacgttc agaagaaaag tgaacgtact ctcattcaca
     7261 acctaacgat gaggtcttga ttatgaataa agatgaagcc ggcggtaact ggaaacagtt
     7321 taaaggtaaa gtgaaagagc aatggggcaa actgaccgat gatgatatga cgatcattga
     7381 aggtaaacgt gatcaactgg tcggtaaaat ccaggaacgt tatggttatc agaaagatca
     7441 ggcagaaaaa gaggtcgtgg attgggaaac ccgcaatgaa tatcgctggt aattaatccc
     7501 tcctgcccga cgtgtacaag gatgtacgcc ctcttaacgc ggtttctttt tcacctgcac
     7561 agagtgatca tgctggcact gttcaggatg acgacacgct tccacttcca cgcatgccgc
     7621 acagagccca tgtgcttcaa tcacattatg ccgcagggca aaccccattt ttgccgccag
     7681 cgtatgcata atgtcttcca cgccttctgc acactcttct ttcaccgcgc cgcagcgatc
     7741 gcatataaac atggctgacg tatgcgtggg ctggtcgaac agatgacaga gcacataact
     7801 gttggtggat tccaccttat gcacaaaacc ttgctcaagc agaaaatcca gcgcgcgata
     7861 aaccgttggc ggcttggctt gcggttcagc ttcgcgcagt aaatcaagca gatcataagc
     7921 gctgatagcg ccatcctgca gactcatcag gcgcaacact tccaggcgct gtggggtcag
     7981 gcgcacatta cgctgcgcgc agattttttc agcctgcgct aataactcct gcgttgtggt
     8041 cttttccatc gggcacctca aagtgggggt taagaatgtc cttactttac catgttccag
     8101 gaaaaacacc gagaaccctt attgttgccg taatgttgat tttctgtttt gtaggtaagg
     8161 tgttgtgttg ccttgtcgta ccatt
//
LOCUS       DAPGWB010000185         8094 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.187, whole genome shotgun sequence.
ACCESSION   DAPGWB010000185 DAPGWB010000000
VERSION     DAPGWB010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8094
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.187"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..1273
                     /locus_tag="RHX79_004075"
     CDS             <1..1273
                     /locus_tag="RHX79_004075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HDV2199186.1"
                     /translation="IFEEYLMEILPQRSDTLDKQELNLKSDRKEKEFPRIKLNGQCYF
                     PGRPQNRIVCRHIAAQYINDIYQNVDYKPHQDDYSSAEKFLTHFNKKCKNQTLALVSS
                     RPEGRCVAACGDFGLVMKAYFDKMESNGISVMAAILLVDNHALTVRLRIKNTTEGCTH
                     YVVSVYDPNVTNDKIRIMSESKEDIKHYSLMDFMNVDYSLLKWSNDHVINQSVAIIPA
                     LPKEQLLMLKGSVDEITPPLSPATMNLLMAIGQNHQLTQLMIQLQKMPELHRTEMLTA
                     YNSGHMNVINTIFNALPTLFNTFKFDKKNMKPLLLANNSNEYPGLFSAIQHKQQNVVE
                     TVYLALSDHARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILNTLNKMA
                     ESFGFTDNPRYIAEKNYMEALLKKASPHTVR"
     gene            complement(1242..2978)
                     /gene="aceK"
                     /locus_tag="RHX79_004076"
     CDS             complement(1242..2978)
                     /gene="aceK"
                     /locus_tag="RHX79_004076"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HDV2199187.1"
                     /translation="MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQ
                     QAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESF
                     FNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDL
                     PLRLRWQNKSRDIHYIIRHLTETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSG
                     TLPFLLPIHQTDDGELFIDTCLTTTAEASIVFGFARSYFMVYAPLPAALVEWLREILP
                     GKTTAELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRV
                     FKVIKDKFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMEL
                     LLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAA
                     ANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPEDELASEPWYSV
                     SPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVYAYRRR
                     QRFSVRYGEMLF"
     gene            complement(3259..4563)
                     /gene="aceA"
                     /locus_tag="RHX79_004077"
     CDS             complement(3259..4563)
                     /gene="aceA"
                     /locus_tag="RHX79_004077"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HDV2199188.1"
                     /translation="MKTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECT
                     LAQLGAAKMWRLLHGESKKGYINSLGALTGGQALQQAKAGIEAVYLSGWQVAADANLA
                     ASMYPDQSLYPANSVPAVVERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEA
                     GFGGVLNAFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARL
                     AADVTGVPTLLVARTDADAADLITSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRG
                     LAYAPYADLVWCETSTPDLELARRFAQAIHAKYPGKLLAYNCSPSFNWQKNLDDKTIA
                     SFQQQLSDMGYKFQFITLAGIHSMWFNMFDLANAYAQGEGMKHYVEKVQQPEFAAAKD
                     GYTFVSHQQEVGTGYFDKVTTIIQGGTSSVTALTGSTEESQF"
     gene            complement(4593..6194)
                     /gene="aceB"
                     /locus_tag="RHX79_004078"
     CDS             complement(4593..6194)
                     /gene="aceB"
                     /locus_tag="RHX79_004078"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HDV2199189.1"
                     /translation="MTEQATTTDELAFIRPYGEQEKQILTAEAVEFLTELVTHFTPQR
                     NKLLAARIQQQQDIDNGTLPDFISETASIRDTDWKIRGIPADLQDRRVEITGPVERKM
                     VINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNP
                     AVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQS
                     WQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGR
                     WDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFI
                     PSKDEERNNQVLNKVKADKALEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEV
                     MREQDAPITADQLLAPCDGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAAT
                     AEISRTSIWQWIHHQKTLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFDDAA
                     RLMEQITTSDELIDFLTLPGYRLLA"
     gene            complement(6463..7392)
                     /gene="metA"
                     /locus_tag="RHX79_004079"
     CDS             complement(6463..7392)
                     /gene="metA"
                     /locus_tag="RHX79_004079"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HDV2199190.1"
                     /translation="MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLM
                     PKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQEQNFDG
                     LIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTR
                     TDKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGD
                     AYLFASKDKRIAFVTGHPEYDAQTLAQEYFRDVEAGLGPEVPYNYFPHNDPQNTPRAS
                     WRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD"
     gene            7549..7992
                     /locus_tag="RHX79_004080"
     CDS             7549..7992
                     /locus_tag="RHX79_004080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDV2199191.1"
                     /translation="MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVR
                     SFLPEAPLWVAVNERDQPVGFMLLSGQHMDALFIDPDVRGCGVGRMLVEHALSMAPEL
                     TTNVNEQNEQAVGFYKKVGFKVTGRSEVDDLGKPYPLLNLAYVGE"
BASE COUNT         2049 a         2018 c         2020 g         2007 t
ORIGIN      
        1 aatatttgaa gaatacctaa tggaaatttt acctcaacgc tcagacactc ttgataaaca
       61 agaattaaac ctaaaatcag atagaaaaga aaaagaattc ccaagaatta aacttaatgg
      121 tcaatgttat tttccggggc gaccccaaaa ccgtatagta tgccgacaca ttgctgcaca
      181 atatattaat gatatttatc agaatgttga ttacaaaccc catcaagatg attactcttc
      241 agctgaaaaa tttctcacgc acttcaacaa aaaatgcaaa aaccagactt tggcgttggt
      301 ttccagccgt cctgaggggc gttgcgttgc tgcctgcggt gatttcgggc tagttatgaa
      361 agcatatttt gacaagatgg aatcaaatgg catcagtgtt atggcagcca tattactggt
      421 ggataaccat gctttgacgg tccggctaag aataaagaac acaactgaag gatgtaccca
      481 ttacgtggtt tcggtttatg atcctaatgt aactaacgat aaaataagaa ttatgagcga
      541 aagcaaagag gatattaaac actattctct gatggatttt atgaatgtag attatagcct
      601 cctgaaatgg tcaaatgatc atgttattaa ccaatctgtt gcaataattc cagcacttcc
      661 gaaagaacag ctattgatgt taaaaggatc tgtggatgaa ataacccctc cattatcacc
      721 agcaacgatg aatttgctaa tggcaattgg tcagaatcac caacttacgc aactgatgat
      781 tcagctccag aaaatgccag aactacatag aacagaaatg ttgactgcct ataatagtgg
      841 acatatgaac gttattaata ctatttttaa cgcattaccc actctgttta atacgtttaa
      901 attcgataaa aaaaatatga agcccctcct cctggcaaat aattctaatg aatatcccgg
      961 tttgttttca gcgatacagc ataaacaaca aaatgttgta gagacggttt atcttgcttt
     1021 atctgaccat gcacgcctgt ttggatttac cgctgaagat attatggatt tttggcaaca
     1081 caaagcgcca caaaaatact ctgcctttga gttggctttt gaatttggtc accgggttat
     1141 tgctgaatta atccttaata cattaaataa gatggctgaa agctttggct ttacggataa
     1201 ccctcgatac attgcggaga aaaattatat ggaagcttta ctcaaaaaag catctcccca
     1261 taccgtacgc taaatctttg cctgcgccga tacgcataaa catcttccac atgcccttca
     1321 cgtatgcggt tttgtagtgc gcgccagtaa tcagcgcgga acaggtcggc gtgcatctct
     1381 tcaaacagcg gaccaatacg cgggtcggcg catagccagt ggcgaaactc ttccgggaaa
     1441 acatcgcccg gcgagacgct gtaccacggt tcgctggcaa gttcgtcttc cggatagcgc
     1501 ggcggcggga tgtcgcggaa attcacttcc gtcatgtagc aaatttcatc gtaatcataa
     1561 aaaaccacac gcccgtgacg ggtgacaccg aagtttttaa acagcatgtc gccaggaaaa
     1621 atgttagcag cggcaagctg gcgaatagcg ttaccgtatt cttcaatggc gtcgcgcaac
     1681 tgctgacctt ccacttgttc cagccagata ttgagcggca ccatccgccg ctcgatatag
     1741 agatggcgaa ttacaatctg ctcaccaaga tcggtgattt tttccgctgc ttcctggagc
     1801 agtaattcca ttaatgccgg ggaaatatgc cgcttctcca gcacaaagtt ttcaaactcc
     1861 tgggtgtccg ccattcggcc cacacggtcg tgctctttca ccagttgata gcaggcacga
     1921 acgtgagcgg cagacatctc tttctgcggc gcgaacttgt ctttgatgac tttgaatacc
     1981 cgatcaaagc ccggcagcgt aaataccaac atcaccattc cacgaatacc cggcgcttca
     2041 atgaactgct cattacagcc ctgtagataa acgagatatt cgcggtagct ttcggttttg
     2101 gcgtgcttct ggcagccgat agccatatac aattcagcag tggttttacc tggcagaatt
     2161 tcccgtagcc actcgaccag cgctgcgggc agcggtgcat aaaccataaa ataagaacgc
     2221 gcaaagccaa aaacaatgct cgcttcggcg gtcgtcgtca ggcaggtatc aataaataac
     2281 tcgccgtcgt ccgtctggtg gatcggcagt aagaagggca acgtgccgga aggcgtgatc
     2341 agtttgccca ccagccaggc ggctttattg cggtaaaaca gttcgttcgc cacctgtaaa
     2401 tgactttccg cgaggttgtc tgtccccagc gtttccgtca gatggcgaat gatgtaatga
     2461 atgtcacggc ttttattctg ccagcgcagg cgcagcggca ggtcgctgat aacgcgcatc
     2521 agtagagatt cccagccgtg atcggggtga aagtctttcg ccagcgggcg gggaatggta
     2581 cgaaagcggc gctctggctg agagctaaag ataaaaagcc gctcgggagt aagcgagcgg
     2641 tggtcaaata accgacagta cacggagtta aaaaagctct ccgcaatctc gaagcgcggg
     2701 taatccggca acagccgcgt gtaatgctct ttaacgcgca gtaaaaatgc cgcgtccgta
     2761 ctttggccgt tagtaatgca gcgcagttgc tccacgacca gaccaacgtg atgatcgtaa
     2821 agatggatac ggtttttcat cgcctgctgg acagcatgcc agtcggcctg ttcgaaacgc
     2881 tgctgcgccc cggaagtcac ttcgaggaat cgaccatact gagcgtcgaa gccttgcaaa
     2941 atggtttgag caatcagtaa ttccaggcca cgcggcattt agcgccctca tcaggagcag
     3001 agaattgccg gatgcggcgt aaacgcctta tccagcctac gttcggcaac ggttgtaggc
     3061 atgataagac gcgcaagcgt cgcatcaggc atcgtgcacc gattgccgga tgcggcgtaa
     3121 atgccttatc cggcctacgt tcggcaacgg ctgtaggcat gataagacgc gcaagcgtcg
     3181 catcaggcat cgtgcaccga ttgccggatg cggcgtgaac gccttatccg gcctacagtc
     3241 agcaacggtt gttgttgctt agaactgcga ttcttcagtg gagccggtca gcgcggtgac
     3301 tgaagacgtg ccgccctgaa taatagtcgt cactttatcg aagtaacctg tacccacttc
     3361 ctgctggtga gatacgaagg tatagccatc tttcgcggcg gcaaattccg gctgctgcac
     3421 tttctcaacg tagtgcttca taccctcgcc ctgggcatag gcgtttgcca ggtcaaacat
     3481 gttgaaccac atgctgtgga tacctgccag ggtgatgaac tggaacttgt agcccatatc
     3541 cgacagctgc tgctggaagc tggcaatagt tttgtcgtcg aggtttttct gccagttgaa
     3601 cgacggcgag cagttataag ccagcagttt gcccggatat ttcgcgtgga tagcttgtgc
     3661 aaagcgacgc gccagttcca gatccggcgt ggaggtttca caccagacca ggtcagcata
     3721 tggcgcatac gccaggccac ggctgatcgc ttgctcaatg cccgcatgag tacggaagaa
     3781 gccttcactg gtacgctcgc cagtaataaa ttcactgtca tacgggtcgc aatcggaggt
     3841 aatcagatcc gccgcatcgg catcggtacg agcaaccagc agggttggaa cgcccgtcac
     3901 gtcagctgca agacgcgccg cgaccagttt ctgaatagct tcctgagttg gcaccaaaac
     3961 tttgccgccc atgtgaccgc atttcttcac tgacgccagc tgatcttcga agtgaactgc
     4021 cgctgcaccg gcttcaatca tcgctttcat cagttcaaag gcattcagga caccgccaaa
     4081 accggcttcc gcatcggcaa cgatcggcag gaagtaatcg acatagcgcg gatcgcccgg
     4141 ctcaatgcct gcggaccatt ggatctgatc ggcacgacgg aaggtgttgt tgatccgctc
     4201 caccacagct ggcaccgagt ttgccggata gagcgactga tccggataca tgctggccgc
     4261 caggttagcg tccgccgcta cctgccatcc cgacagatag actgcttcaa tacccgcttt
     4321 cgcctgttgc agcgcctgac cgccagtcag tgcaccgagg ctgttgatgt agcctttttt
     4381 cgactcgcca tgcagcagac gccacatttt cgccgcgccc agttgcgcca gggtgcattc
     4441 aggattgact gaaccgcgta atttcaccac atcttccgcg ctgtatgggc gagtaatgcc
     4501 ttcccaacgc ggttgagtcc actctttctg taattcttca atttgttgtg tacgggtttt
     4561 catgtgcaga tgctccatag ttatgtggtg gtttacgcta acaggcggta gcctggcagg
     4621 gtcaggaaat caattaactc atcggaagtg gtgatctgtt ccatcaagcg tgcggcatcg
     4681 tcaaaacgcc cctgggagaa acgttcttcg cccagttcgc tggcaatgac tttcatctct
     4741 tcacccagca tctggcggaa caaggctttg gtcaccggtt tgccattgct caacgttttt
     4801 tgatgatgga tccactgcca gattgaggta cgggaaattt cagccgtcgc cgcatcttcc
     4861 atcaggccat aaatcggcac gcagccgttg ccggagatcc atgcttcgat gtactgcact
     4921 gccacgcgaa tgttggcgcg cataccttct tcggtgcgtt caccatcaca aggtgccagc
     4981 agctgatcgg cagtaatcgg cgcgtcttgt tcgcgcatca cttcaagctg atttttacgg
     5041 gagccgagaa tgtcgttgaa taccgccatt gccgtatccg caaggcctgg gtgagcaatc
     5101 catgtgccat cgtgaccgtt attggcttcc agcgctttat ccgcttttac tttgttgagc
     5161 acctggttat tgcgctcttc atctttgctc ggaataaacg ctgccatgcc gcccatcgca
     5221 aaagcaccgc gtttatggca ggttttaatc aacaggcgtg agtaagcatt caggaatggt
     5281 ttatccatcg tcactgcctg tctgtctggc aggacgcgat cgggatagtt tttcaacgtt
     5341 ttgatatagc tgaagatgta atcccaacga ccgcagttca gaccaacaat atggtcacgc
     5401 agcgcgtgaa ggatttcatc catctggaac acggcgggca gcgtttcaat cagcaacgtc
     5461 gccttgatgg tgccgcgcgg cagattaaag cgatcttctg catagctgaa gacttcgctc
     5521 caccaggccg cttcctgcca ggactgggtt ttcggcagat agaaataggg accgctgccc
     5581 tttgccaaca gtgcctgata gttgtggaag aaatagagcg caaaatcaaa caggctaccg
     5641 gggattgcct caccacgcca ggtgacatgt ttttccggca agtgcagacc gcgtacccga
     5701 caaatcaaaa ccgctggatt gggcttgagc tgataaattt tgcctgcttc attggtatag
     5761 ctgatggtgc cgttaaccgc atcgcgcagg ttaatttgcc cgtcgatcac tttgttccag
     5821 tctggtgcca gtgaatcttc gaaatcggcc ataaagactt tcacattggc gttcagtgcg
     5881 ttgatcacca tcttgcgctc aaccgggcca gttatctcga ctcgacgatc ttgtaagtcc
     5941 gcgggaatac cacgaatttt ccagtccgta tcgcgaatgg aagctgtttc cgaaataaaa
     6001 tcaggcaacg ttccgttatc aatatcttgc tgctgctgaa tgcgcgctgc cagaagttta
     6061 ttgcgttgtg gcgtaaaatg cgtcaccagc tcagtcagaa attctaccgc ttcggcagta
     6121 agaatttgct tctcctgctc gccatacggc cttatgaaag ccagttcatc ggttgttgtt
     6181 gcctgttcag tcatcgtgca gctcctcgtc atggatccga aaacttcccc actgtgaacg
     6241 aaggatcgtt gtgcgctttt cgttcagcac aactaagact actcatttaa aatgcaaaat
     6301 caaaaacaat ttccatttta attaaaaata cttgataact tattgataac aatatgaata
     6361 aaatttattc acctcctgag gtgcgtttcg gaaataaaaa aggcacccga aggtgcctga
     6421 ggtaaggtgc tgaatcgctt aacgatcgac tatcacagaa gattaatcca gcgttggatt
     6481 catgtgccgt agatcgtatg gcgtgatctg atagacgtaa tagttgagcc agttggtaaa
     6541 cagcaaatta ccgtgactac gccagctcgc tcgcggtgta ttttgcggat cattgtgcgg
     6601 gaaatagtta tacggtactt ccgggcctag tccggcttcc acatcgcgga aatattcctg
     6661 cgccagcgtt tgcgcatcat attcgggatg gcccgtcaca aaggcaatgc gcttatcttt
     6721 gctggcaaac agatatgcat ccccttcttc cgtctctgcc agaatttcca gatcggtgta
     6781 atcacgaatc aacgctgccg gaaagtcagc atagcgcgaa tgtggtgcca ggaatgaatc
     6841 atcaaagcca cgcgtcagaa gcgcatgagg atggagaata tgatgctcgt aaacgccaga
     6901 gagtttgtcg gtgcgagttt gcttaggaat gccgtagagg atattgagcg cggcctgtac
     6961 cgcccagcag acaaacagcg tcgaggtgac gtgatctttc gaccactcca gcacctgttt
     7021 gatctgcggc cagtaagcga catcattaaa ctccaccagg cccagcggcg caccggttac
     7081 aatcagaccg tcaaagttct gttcctgaat atcttcaaag ttacagtaga agttgttcag
     7141 atgctctgcg ggcgtgttgc gcgattcacg ggaatcgatg cgcaacagct gaatatcgac
     7201 ctgcaaaggt gagtttgaaa gcaggcgcag aaactgattt tcagtttcaa tcttcttcgg
     7261 catcaggtta aggatcagaa ccttaagtgg acgaatttcc tgaccagacg cacgagaagt
     7321 tgtcatcaca aagacgtttt cttcacgcaa gaaattgacg gcgggtagtt cgtccggcac
     7381 acgaatcggc ataacctgat tacctcacta catacgctta tacgtttaga catccagata
     7441 gctgaagata accagaaaat ttgccaatgt cgagcctgca tgttgaaggt gagaaagttt
     7501 caaggaaaag actacgttag aatataagaa tgactaaaag gagagaaaat ggttattagt
     7561 attcgccgct cacggcatga ggaaggggag gaactcgttg cgatttggtg tcgatctgtc
     7621 gatgccaccc acgatttttt atcagcagag tatcgggccg agctggaaga gctggttcgt
     7681 tcctttctgc cggaagcacc gttgtgggtc gcggttaatg aacgggatca gccggttggg
     7741 tttatgttgt taagtgggca gcatatggat gcgctgttta tcgatcctga tgtgcgcggc
     7801 tgcggcgtgg gtcggatgct ggtggagcat gcgctctcga tggcaccgga actgacaacc
     7861 aacgttaatg agcaaaatga gcaggcggtt gggttctata agaaggtggg ttttaaggtt
     7921 acgggacgct ctgaggtgga cgatttgggg aaaccgtatc cgttgctgaa tctggcgtat
     7981 gtgggggaat aagccgcccc tgccgtgcct gcccaggctg gagaagacgc gccagcgtcg
     8041 catccgacct ttttctgcac cagcgcaaaa aggcccagtc ttccgactgg gcct
//
LOCUS       DAPGWB010000186         8077 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.188, whole genome shotgun sequence.
ACCESSION   DAPGWB010000186 DAPGWB010000000
VERSION     DAPGWB010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8077
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.188"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..1127
                     /locus_tag="RHX79_004081"
     CDS             <1..1127
                     /locus_tag="RHX79_004081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HDV2199192.1"
                     /translation="YAVIDPKNKIVNGLKAESRSIENNYIKLLFSENGDLISLYDKRY
                     GKEYITENMHSEIRAYHEDAGFFAAWDFASNYRDGESYVLLAEKMTTVISGPKTTMTL
                     IYHYNSSYLRFAFTLTQDSPRVDVQTFIDWHEPNVSLKVKFPVSVQTSLAQCQIQFGV
                     IDRPTHSDDSFAFAKDEIPAHHWVDLSDQETGIALIAKKKYGYRVKDQTLELTLLRSQ
                     HKPGEVVKTDNYDNFLINNFADIGKQKFIFSLFPHHGDYRVGGVINQAYIMNHPLQVV
                     PVKPHPGELPPSLSFFAIDTNSVIIETIKLAEDGDGIIVRLYESHGLEISAMLSWVCN
                     YHYVQYVDLQENKLDDSFYCNQYCNLEFKPFEIITLRLTQ"
     gene            complement(1216..2187)
                     /gene="lpxM"
                     /locus_tag="RHX79_004082"
                     /gene_synonym="msbB"
     CDS             complement(1216..2187)
                     /gene="lpxM"
                     /locus_tag="RHX79_004082"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416369.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HDV2199193.1"
                     /translation="METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFR
                     DPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAE
                     LAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
                     FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSE
                     FVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHT
                     IARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK"
     gene            complement(2307..3629)
                     /gene="mepM"
                     /locus_tag="RHX79_004083"
     CDS             complement(2307..3629)
                     /gene="mepM"
                     /locus_tag="RHX79_004083"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HDV2199194.1"
                     /translation="MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRD
                     ATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVST
                     GDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRE
                     TRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQ
                     WQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRN
                     GTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGE
                     VVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIALSGNTGRSTGP
                     HLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD"
     gene            complement(3645..4577)
                     /gene="znuA"
                     /locus_tag="RHX79_004084"
     CDS             complement(3645..4577)
                     /gene="znuA"
                     /locus_tag="RHX79_004084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HDV2199195.1"
                     /translation="MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIAD
                     GVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQV
                     TIAQLEDVKPLLMKSIHGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHG
                     KLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFG
                     LTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMG
                     TLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD"
     gene            4656..5411
                     /gene="znuC"
                     /locus_tag="RHX79_004085"
     CDS             4656..5411
                     /gene="znuC"
                     /locus_tag="RHX79_004085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HDV2199196.1"
                     /translation="MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKS
                     TLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDIL
                     PALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALY
                     DLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFG
                     PRGAEQLGIYRHHHNHRHDLQGRIVLRRGNDRS"
     gene            5408..6193
                     /gene="znuB"
                     /locus_tag="RHX79_004086"
     CDS             5408..6193
                     /gene="znuB"
                     /locus_tag="RHX79_004086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HDV2199197.1"
                     /translation="MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLL
                     GVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVS
                     LMSNIRVDLMAYLFGDLLAVTPEDLISIAIGVVIVVAILFWQWRNLLSMTISPDLAFV
                     DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAV
                     LVGMVAVTGGLTFSAFYDTPAGPSVVLCAALLFILSMMKKQAS"
     gene            complement(6340..7350)
                     /gene="ruvB"
                     /locus_tag="RHX79_004087"
     CDS             complement(6340..7350)
                     /gene="ruvB"
                     /locus_tag="RHX79_004087"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDV2199198.1"
                     /translation="MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIF
                     IKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT
                     NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
                     TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARG
                     TPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF
                     FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPE
                     MP"
     gene            complement(7359..7970)
                     /gene="ruvA"
                     /locus_tag="RHX79_004088"
     CDS             complement(7359..7970)
                     /gene="ruvA"
                     /locus_tag="RHX79_004088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDV2199199.1"
                     /translation="MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE
                     AIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAV
                     EREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE
                     QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL"
BASE COUNT         1966 a         2026 c         1932 g         2153 t
ORIGIN      
        1 gttatgctgt gattgatcca aagaataaga tcgtaaatgg tctgaaggca gaatctcgaa
       61 gtattgaaaa taattacatt aaacttcttt tttcagaaaa cggtgattta atttcgctat
      121 atgataaaag atatggtaaa gaatacatta ctgaaaatat gcacagtgag atccgtgcat
      181 accacgaaga tgcaggtttt ttcgcggcct gggattttgc ttcaaattat cgtgatgggg
      241 aatcatatgt tttactcgct gaaaaaatga caactgtaat cagcgggcct aaaactacga
      301 tgacgctgat ttatcactac aattcctctt atcttcgctt cgcatttacc ctgacacagg
      361 acagtccacg cgttgatgtc caaactttta ttgattggca cgaacctaat gtttctctca
      421 aagtcaaatt cccggtgtca gtacaaacat ctcttgcaca atgtcaaatt cagttcggtg
      481 taattgacag accaacgcat agcgatgatt cgttcgcttt tgccaaagat gaaataccag
      541 cacatcactg ggtcgacctt tctgatcaag aaactggcat agctttaata gcaaaaaaaa
      601 aatatggcta tcgtgtcaaa gaccagacgc ttgaattaac tttgctgcgt tcgcagcata
      661 aacctgggga agttgttaag acagacaatt atgataattt cctgattaat aattttgcag
      721 atattggtaa acaaaaattc atattctcct tatttcctca tcatggagat taccgtgtgg
      781 gtggtgttat taatcaagcc tatataatga atcatccctt acaggtcgtc cctgtcaaac
      841 cgcacccggg tgaattaccc ccttcactat cattttttgc tatcgatact aacagcgtta
      901 tcatcgaaac aataaaatta gctgaagacg gcgacggtat aatcgtaaga ttatatgaga
      961 gtcatggatt agaaatttca gccatgcttt cgtgggtatg taattatcac tacgttcaat
     1021 atgtcgatct ccaagaaaat aaattagatg acagttttta ttgcaatcaa tattgcaatc
     1081 ttgaattcaa accttttgaa attatcacgc tacgattaac tcaatagcgt actaatctaa
     1141 aaactcaaaa tggtgagaac actcattgag attttttatc aagtacagcc tctcaataat
     1201 ttgagaggct gttttttatt tgatgggata aagatctttg cgcttatacg gctggatttc
     1261 gcccggtttg cgagttttca gcaattttag tatccaggtg tattgttctg gtcgcggacc
     1321 aacaaaaatc tcgacttctt cattcatccg ccgcgcaatc gtatgatcat ccgcctctaa
     1381 cagatcatcc atcggtgggc gcacctgaat cgtcagacgg tgcgtcttgc catcataaat
     1441 cggaaacagc ggaacaacgc gcgcacggca cactttcatc aaacgaccaa tcgcgggcaa
     1501 cgtcgcttta taggtggcaa agaaatcaac aaattcgctg tgctcagggc catgatcctg
     1561 atcgggtaaa taatatcccc agtagccctg acgtaccgac tggatgaatg gtttaatacc
     1621 gtcatttctc gcatgcagac gaccgccaaa gcgacgacgc accgtgttcc agacataatc
     1681 aaaaaccggg ttgccctgat tatggaacat cgctgccatt ttctgccctt gcgaggccat
     1741 cagcatggca ggaatatcga cggcccaacc gtgcggcacc agaaagataa ctttctcgtt
     1801 attacgcctc atctcttcga tgatctccag cccttgccag tcaacgcgcg gctgaatttt
     1861 ctccggtccg cgtattgcca actcagccat cattgccatc gcttgcggcg cggtggcaaa
     1921 catctcatca acaatcgctt cgcgttcagc ttcactacgt tctggaaagc agagcgacag
     1981 attgattaac gcacgacggc gtgagctttt tcccagtcgt ccggcaaaac gtcccagccg
     2041 tgccagaatg ggatcacgga actttggcgg cgttaaagcg atacccgcca tcgctgctac
     2101 gcccagccat gctccccagt agcgcgggtg gcgaaaggat ttatcaaact caggaatgta
     2161 ttcgctatta ttttttttcg tttccatgct tttccagttt cggataaggc aaaaatcaat
     2221 ctggtgatag tgtagcggcg caacttgccc cgcaccaaat aaaaaaagcc ggtactgact
     2281 gcgtaccggc tgcgaatgga tgttaattaa tcaaaccgta gctgcggcac aatctctttg
     2341 gcctgcgcca ggaattcgcg acgatcggag ccggtcagcc cttcggtacg cggcagtttt
     2401 gccgtcagcg ggtttacggc ctgctggttt atccatactt catagtgcag atgcggcccg
     2461 gttgaacgtc cggtattacc ggaaagcgcg atacggtcgc cacgtttcac cttctgtccc
     2521 ggtttcacca gaatcttgcg caagtgcata taacgcgtgg tgtagctgcg accatgacga
     2581 atagccacat aataacctgc tgcgccactg cgtttggcaa ccaccacttc accgtcaccc
     2641 actgaaagca ctggcgtacc ctgcggcatg gcgaaatcaa cacctctgtg tggtgcaacg
     2701 cgaccggtca ccggattagt acgacgcggg ttaaagttag acgagatacg gaactgtttc
     2761 gccgtcggga atcgcaagaa tcctttcgcc agaccagtac cgttacgatc gtagaatttg
     2821 ccatcttcag cgcggatagc gtaataatct ttaccttctg aacgcaaacg tacgcccagc
     2881 agctggcttt gctcacgttt accatcaagc atttctcgag acattaatac cgcaaattca
     2941 tcgccttttt tcagtttgcg gaaatccatt tgccactgca tggctttaat cactgcgctc
     3001 acttcggcgc tggttaaacc ggcgtttctg gcgctggcaa caaagctccc cccgacggta
     3061 cctttcagca gattgttaac ccactctcct tgctgcattt cgctggtcat tttaaaaccg
     3121 ttagcggcag tacggtcata ggttcgggtt tcacgacgag acacttccca ggtgaggcgc
     3181 tgcagttcgc cgtccgcggt taatgtccag gagagttgtt gaccgatttt caggttacgc
     3241 aattctttgt cggcagcagc cagttgggtg atatcaccca tatcaatacc atactgattg
     3301 agaatgctgc ttagcgtatc gccagtggaa acaacatatt catgcacgcc cgcttcaccg
     3361 gcgattttgt catccagttc gtcctgggga atggcttcat cttcttgtgc agcttgatca
     3421 atcggctcac tggcttcagg taagagcgaa cgaatttcgt tctgttccag ctcaatggtt
     3481 ttgacaattg gcgtggcatc gcggtgataa acatagggcc gccagacagc gacggccaga
     3541 gtaagaacgg tgagcgaccc caacataacg cggtgtggtc gcggtaaatt attaaacgcc
     3601 agggcgacag agcgggctat ctgttgcacg taatcacttc ctcattaatc tcctttcagg
     3661 cagctcgcat actggttggc taattgactc aggaattctg aatagcttgt tttacccagt
     3721 ttgatattcg tccccagggg atccaacgtt cccatacgaa cggatgtccc tcgtgcgacg
     3781 ctctcaacga ccgctggcct gaactgtggc tcagcaaaaa cgcaggttgc tttttgctca
     3841 accaactgtg ttcttatttc atgtaaacgc tgcgcgccag gttgaatctc agggttaacg
     3901 gtaaaatgac caagcggtgt cagtccaaac tgtttttcga aatagccgta agcatcgtga
     3961 aaaacgaaat aacctttccc cttgagcggc gcgagctcgt taccaacctg cgtttcggtt
     4021 gaggctaatt gtgcctcaaa atccttcagg ttggcgtcaa gtttggctcg actttgcggc
     4081 ataagttcca ctaattttcc atggattgca accgctgtag cccgcgctat ctctggggaa
     4141 agccaaagat gcatgttgaa atcgccgtga tggtgatctt cgtcactttt ttccgcgtgg
     4201 tcgtgatcat catcatcgcc gtgaatactt ttcatcagta gcggtttcac atcttcaagc
     4261 tgcgcaatcg ttacctgctt cgctcctggt aatttgctta ccggtttttg cataaacgct
     4321 tccatctccg ggccaaccca aacgactaag tccgcgttct gtaagcgttt tacatccgat
     4381 ggacgcagtg aataatcatg ttctgaagcg ccgtcaggca gtaaaacctc cgtttctgtt
     4441 acaccatcag caatggcaga agcgatgaac ccaacgggtt taagcgaagc gacaacggcg
     4501 gcatctgcgg cctgtgttgc acctccccag agagcggcgg ataatgctgc gaaaagaagc
     4561 gtttttttat gtaacataat gcgaccaatc atcgtaatga atatgagaag tgtgatatta
     4621 taacatttca tgactactgc aagactaaaa ttaacatgac aagtctggtt tccctggaaa
     4681 atgtctcggt ttcttttggc caacgccgcg tcctctctga tgtgtcgctg gaacttaaac
     4741 ctggaaaaat tttgacttta cttgggccaa atggcgcagg taagtcgaca ctggtacggg
     4801 tagtgctcgg gctagtaaca cccgatgaag gggttatcaa gcgtaatgga aaactgcgca
     4861 tcggctatgt accgcagaag ctgtatctcg acaccacgtt gccactgacc gtaaaccgtt
     4921 ttttacgctt acgccctggt acacataaag aagatatttt gcctgcactg aaacgtgtcc
     4981 aggccgggca cctgattaac gcaccgatgc aaaagctctc tggtggcgaa acgcagcgtg
     5041 tactgttagc gcgagcattg ttaaatcgcc cgcaattatt agtgctggat gaacccactc
     5101 aaggcgtgga tgtaaatggc caggtggcgt tatatgacct tattgaccag ttgcgtcgcg
     5161 aactggattg tggcgtttta atggtctctc acgatctgca tctggtaatg gcaaaaaccg
     5221 atgaagtgct gtgtctgaat caccacattt gttgttccgg cacaccggaa gttgtttccc
     5281 tgcatccgga gtttatttca atgtttggtc ctcgtggtgc tgaacaactg ggtatctatc
     5341 gccatcatca taatcatcgt cacgatttac agggacgaat tgttttgcgt cggggaaatg
     5401 atcgctcatg attgaattat tatttcccgg ttggttagcc gggatcatgc tcgcctgtgc
     5461 cgcgggtccg ctgggttcgt ttgtagtctg gcgtcgtatg tcttatttcg gtgatacgct
     5521 ggctcatgcc tcattacttg gtgtcgcgtt tggtttgttg ctggacgtga atccattcta
     5581 tgcggtgatt gccgttacgc tgctgctggc gggcggtctg gtatggctgg agaagcgtcc
     5641 acagctggcg atcgacacgt tattagggat tatggcgcac agtgccctgt cgctgggcct
     5701 ggtggtcgtt agtctgatgt ctaatattcg tgttgatttg atggcttacc tgttcggtga
     5761 tttgctggca gtgacgccag aagatctcat ctctattgcg attggcgtgg tcatcgtggt
     5821 ggctattttg ttctggcaat ggcgcaattt gctgtcgatg acgattagcc cggatctggc
     5881 gtttgttgat ggtgtgaaat tacagcgcgt gaaattgttg ttgatgctgg tgacggcatt
     5941 gacgattggt gtagcgatga aatttgtcgg tgcgttgatt attacttcgt tgctgattat
     6001 tcctgcagct actgcgcgtc gctttgcccg tacgccggaa cagatggctg gtgtcgctgt
     6061 tttggtgggg atggtggcag taactggcgg tttaaccttt tccgcgtttt acgatacgcc
     6121 ggcgggtccg tcggtggtgc tatgtgcggc actgttattt attctcagta tgatgaaaaa
     6181 gcaggccagc taatctatcg ctgaacacat ttgtcggatg cggcgcgagc gccttatccg
     6241 acctacggtt cgctatctct ggtaggcctg gtaagacgcg aatagcgtcg catcaggcac
     6301 actgccaatg tcggatgcgg tgcgagcgac caatccgact tacggcattt ctggcggcgt
     6361 tatgccaaag tgattccacg cccgcgtcgt cgccatacgc ccacgcggtg tacgctgcaa
     6421 aaagccttgc tgaatcaaat aaggttccag cacatcctca atggtttcac gttcttcgcc
     6481 aatggctgcc gcaaggttat ccagacctac cggcccacca aagaacttat cgattaccgc
     6541 cagcaataac ttgcggtcca tataatcgaa accttcagca tcgacattca acatatccaa
     6601 cgcctgagca gcgatatctg ccgagatggt gccatcgtgc ttcacttcgg cgaaatcacg
     6661 cactcgacgc agcagacggt tggcaatgcg cggcgtaccg cgagctcgac gagcaacttc
     6721 cagcgcgccg tcatcactca tctcaagccc cataaagcgt gcgctgcgac tgacgatata
     6781 ttgcagatcc ggcacctgat aaaactccag acgctgcaca ataccaaaac gatcgcgcaa
     6841 cggtgatgtc agcgaacctg cgcgcgtggt tgcaccaatc agggtaaacg gcggcaaatc
     6901 aattttaatg gagcgtgccg ccggaccttc accaatcatg atatccagtt ggtagtcttc
     6961 cattgccgga tacaacacct cttccaccac tggcgaaaga cggtggatct catcaataaa
     7021 caacacgtca tgcggttcaa ggttagtgag catcgctgcc agatcgcccg ccttttccag
     7081 caccggacca gaagtcgtgc gtaaattaac gcccatttca ttggcgacga tgttggcaag
     7141 cgtagtttta cccaaccccg gaggaccgaa aatcaacaga tgatcgaggg catcgccgcg
     7201 cagtttcgct gctttgatga aaatctccat ctgtgaacga acctgcggct gaccaacata
     7261 ctcttccagt aatttagggc gaatggcgcg atctgccaca tcttccggca aagtggtacc
     7321 ggcagaaatc agacggtctg cttcaatcat cctttacctc ataacgcggc gcgtagggct
     7381 tcgcgaatta atgtttcact gctggcgtca gggcgagcga ttttgctcac catgcggctt
     7441 gcctcttgtg gtttatagcc cagcgccacc agcgcggcaa ctgcttcttg ttcagcatcg
     7501 tcggtcgccg ggctggcagg tgatgtgagt accaggtcgg cggctggcgt aaagagatcg
     7561 ccatgcaaac ctttaaatcg gtctttcatt tcaacaatca agcgttcggc ggtttttttg
     7621 ccaatacccg gcagtttcac cagtgccccc acttcttcac gctcaacggc attaacgaac
     7681 tgctgcgctg acattccgga gaggatcgcc agcgccaact tcgggccgac gccgttggtt
     7741 ttgatcaact ctttgaacaa cgtgcgctct tgtttattgt taaaaccgta cagcagctgc
     7801 gcgtcttcac gcaccacaaa gtgggtgaaa acgatcgctt cctgtcccgc ttcagggagt
     7861 tcataaaaac aggtcatcgg catatgcact tcatagccta cgccgcccac ttcaattaac
     7921 accagcgggg gttgtttttc aatgatgatg cctctgagtc tgcctatcac atgacgctcc
     7981 tgcgtaatga atcaaagata atgctgtatg ataaaaaaat gctggataga tatccagcga
     8041 aggatgaaga aaacttgcga ggtgtctcga tgatctg
//
LOCUS       DAPGWB010000187         8027 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.189, whole genome shotgun sequence.
ACCESSION   DAPGWB010000187 DAPGWB010000000
VERSION     DAPGWB010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8027
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.189"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            54..1187
                     /gene="ompN"
                     /locus_tag="RHX79_004089"
     CDS             54..1187
                     /gene="ompN"
                     /locus_tag="RHX79_004089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpN"
                     /protein_id="HDV2199200.1"
                     /translation="MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGL
                     KFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF
                     GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAY
                     TSSDRTNDQVNHTAAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVAN
                     KTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVDDKDLVKYADVGATY
                     YFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF"
     gene            1328..1762
                     /gene="uspF"
                     /locus_tag="RHX79_004090"
     CDS             1328..1762
                     /gene="uspF"
                     /locus_tag="RHX79_004090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310024.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspF"
                     /protein_id="HDV2199201.1"
                     /translation="MNRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSL
                     PYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILEM
                     AKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR"
     gene            1938..2873
                     /gene="ttcA"
                     /locus_tag="RHX79_004091"
     CDS             1938..2873
                     /gene="ttcA"
                     /locus_tag="RHX79_004091"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDV2199202.1"
                     /translation="MSQNQEISKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMV
                     CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKI
                     VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFL
                     NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPN
                     LQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGD
                     LAFDREEIPLQPAGWQPEEDENQLDELRLNVVEVK"
     gene            complement(3002..4375)
                     /gene="dbpA"
                     /locus_tag="RHX79_004092"
     CDS             complement(3002..4375)
                     /gene="dbpA"
                     /locus_tag="RHX79_004092"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
                     /protein_id="HDV2199203.1"
                     /translation="MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVR
                     VQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK
                     ILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
                     MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQ
                     QFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLE
                     QRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTAR
                     AGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSILPLEAEMATLCIDGGKK
                     AKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKT
                     CRVRLLK"
     gene            complement(4853..5836)
                     /gene="zntB"
                     /locus_tag="RHX79_004093"
     CDS             complement(4853..5836)
                     /gene="zntB"
                     /locus_tag="RHX79_004093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZntB"
                     /protein_id="HDV2199204.1"
                     /translation="MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLH
                     LNYVHHESAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPD
                     QLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSE
                     FIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW
                     MSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMV
                     FLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL"
     gene            6091..7323
                     /gene="dgcM"
                     /locus_tag="RHX79_004094"
     CDS             6091..7323
                     /gene="dgcM"
                     /locus_tag="RHX79_004094"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcM"
                     /protein_id="HDV2199205.1"
                     /translation="MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQ
                     LRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRELTETEPVI
                     IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA
                     LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQ
                     TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM
                     QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE
                     EFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRV
                     DDALYRAKNDGRNRVLAA"
     gene            complement(7344..7907)
                     /gene="smrA"
                     /locus_tag="RHX79_004095"
     CDS             complement(7344..7907)
                     /gene="smrA"
                     /locus_tag="RHX79_004095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA endonuclease SmrA"
                     /protein_id="HDV2199206.1"
                     /translation="MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQL
                     DNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMM
                     FSFIQQAMADGLRNVLIIHGKGRDDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGG
                     SGACYVALRKTAQAKQENWERHAKRSR"
BASE COUNT         2118 a         2019 c         1901 g         1989 t
ORIGIN      
        1 cactccccga aatggggata aaaggcaaat aaaataacta aaggatttat tcaatgaaaa
       61 gcaaagtact ggcactttta attcctgccc tgctcgccgc aggtgctgca catgcagccg
      121 aagtttataa taaagacggc aacaaattag atctgtatgg caaagttgat ggcctgcatt
      181 atttttctga taattcagcg aaagatggcg accagagcta tgcgcgtctg ggttttaaag
      241 gcgaaaccca aattaacgat caactcactg gctacggtca atgggaatac aatattcagg
      301 caaacaacac tgaatcttca aaaaaccagt catggacccg tctggcattt gccgggctga
      361 aatttgcaga ttacggttct ttcgattacg gacgtaatta tggcgtaatg tacgacatcg
      421 aaggctggac cgatatgctg cctgaatttg gcggtgactc ttataccaat gcagacaact
      481 ttatgactgg tcgagccaat ggcgtcgcga cttatcgtaa tactgatttc ttcggtctgg
      541 taaatggtct gaacttcgcg gtgcagtatc aaggtaacaa cgaaggagcc agtaatggtc
      601 aggaaggcac caacaacgga cgtgatgttc gccatgaaaa cggtgacggc tggggtcttt
      661 ccacaacata tgatttaggc atgggcttta gcgctggtgc ggcatacacc tcttctgacc
      721 gcaccaatga ccaggttaac catactgcgg cgggtggtga taaagcagac gcgtggactg
      781 ctgggctaaa atacgatgct aacaatattt acctggcaac catgtattca gaaacgcgta
      841 atatgacccc gtttggcgac agcgattatg ctgttgcaaa caaaacccag aactttgaag
      901 tcactgcaca gtaccagttt gattttggtc tgcgtccggc agtctctttc ctgatgtcta
      961 aaggccgtga cctgcacgct gccggtggtg cagacaaccc ggcaggtgtt gatgataaag
     1021 atctggttaa atacgccgat gttggcgcga cttactattt caataaaaac atgtccactt
     1081 atgttgacta taaaatcaac ctgttggatg aagatgacag tttctacgct gccaatggca
     1141 tctctaccga tgatattgtc gctttaggtc tggtttatca gttctaaatc ctcctgcccg
     1201 ctgttatggc gggctttttc tgcttattct tcctcctttg atctaaatta aaaatgtgaa
     1261 ctccgtcatt acacaaaaag tgtcatctgg cgttacactt tatgcggata ctaaaacagg
     1321 aggttttatg aacagaacga ttcttgtccc tatcgatatt tccgattcag aattaactca
     1381 acgcgtgatt agccacgttg aggcagaggc aaagattgat gatgcagagg ttcatttcct
     1441 gacggtaata ccttcactgc cctactatgc ctctctgggt ttagcgtatt ccgcagaatt
     1501 accggcaatg gatgacctga aagcggaagc caaatcgcaa ctggaagaga tcattaaaaa
     1561 atttaaactg ccaaccgaca gagtgcatgt ccatgttgag gaaggctcgc ccaaagaccg
     1621 cattctggaa atggcgaaga agatccccgc tcatatgatc atcattgctt cccatcgacc
     1681 ggatatcacc acttatctgc tcggttccaa cgccgcagct gtagtgcgtc acgcagagtg
     1741 ctccgtgctg gttgtgcgct gacactaacg cccgcacatt gctgcgggct ttttgattca
     1801 tttcgcaaat gtgctgacat tttcccctct aatccgtacc atacacgcca ctgtttttat
     1861 atcagatttc ttatgctggg cattccggca tgacgcatac tcttctgatg ccatataacg
     1921 aattgagtcg cttttaaatg tcgcaaaatc aagaaattag taagaaagaa caatacaacc
     1981 tgaacaaatt acaaaaacgt ctgcgtcgta acgtgggcga agccattgct gacttcaata
     2041 tgattgaaga aggcgatcgc atcatggttt gcctctccgg gggtaaagac agctatacca
     2101 tgctggagat tctgcgcaat ttgcagcaaa gcgcgccaat caatttttcg ctggtggctg
     2161 ttaacctcga tcaaaagcaa ccgggcttcc cggaacacgt tctgcccgag tatcttgaaa
     2221 agctgggcgt tgagtacaag attgttgaag agaatactta cggtatcgtg aaagagaaga
     2281 ttccagaggg caaaaccact tgctcactgt gttctcgcct tcgtcgcggt atcctttatc
     2341 gtaccgcaac ggaactgggg gcgacgaaga tcgcgttggg tcaccatcgt gacgatatcc
     2401 tgcaaacgtt gttcttaaat atgttctacg gcggcaagat gaaaggtatg cctccgaaac
     2461 tgatgagcga tgatggcaaa catatcgtta ttcgtccgct ggcctactgc cgcgagaaag
     2521 atattcagcg atttgccgat gcaaaagcgt tcccgattat tccgtgcaac ctgtgcggtt
     2581 cacagcctaa cctgcaacgt caggtgattg ctgacatgtt gcgtgactgg gataaacgtt
     2641 atccagggcg tatcgagacg atgttcagcg cgatgcagaa tgtggtgccg tcgcatctgt
     2701 gcgataccaa cctgttcgat ttcaaaggca ttacccacgg ttctgaagtg gttaacgggg
     2761 gtgatctggc gtttgatcgc gaagagatcc cactacaacc ggcgggctgg cagccagaag
     2821 aagatgaaaa tcagttggat gagttacggc tgaatgtggt tgaagtgaaa taaccaggat
     2881 agcgcccgat gcgcaagcgt atcgggctac tcttatggag gccggataag acgcggccag
     2941 cgtcgcatcc ggcaatcccg cataagatgt ttactcttgc acccggcaat tcaacatttc
     3001 attattttaa taaccgcacc cggcacgttt ttcctttaat cttcccgccc tgtaactgtt
     3061 tccatgcttt atgagcaaca gcctgacgca ccgcgacata gacatgcgcc ggatgcacgg
     3121 cgattttgcc aatatctgcg ccatcaagcc cgatgtctcc tgtcagcgca cctaatacat
     3181 cacccgggcg cattttggct tttttcccgc catcgataca caacgttgcc atttctgctt
     3241 ccagcggcaa aatggaacta ttagctggcg gcgtttgcca gttaagtttt atctgcaaca
     3301 tgtcagaaat gatattggcc cgctgtgctt cttccggagc acagaaactg atcgccagac
     3361 cgctatttcc tgcacgagct gtacggccga tgcgatgtac atgaacttca gggtcccacg
     3421 ccagctcaaa gttcaccacc agctcaagcg atttaatatc cagaccacgc gcagcaacat
     3481 cagtcgcaac cagtacacgg gcgctaccgt tagcaaaacg taccagggtc tgatcgcgat
     3541 cgcgttgctc cagatcgccg tgtaacgaca atgcactttg ccctacttca ttcagcgcgt
     3601 cgcagacagc ctggcaatct tttttggtat tgcaaaacac cacacaagag gatggctgat
     3661 gcaaacttaa taaccgttgc aacagaggaa ttttgccttt actggatgtc tcataaaatt
     3721 gttgttcaat gggtggcaaa gcatctgttg agtcaatttc aatcgccaaa ggatcgcgtt
     3781 gcactcgtcc gctgattgcg gcgatggctt ccggccaggt tgccgaaaac agaagcgtct
     3841 gtcgagatgc aggcgcaaaa cggatgacat catcaatggc atcgctaaat cccatatcca
     3901 gcatgcggtc ggcctcatcc atcaccaaag tattcagcgc atccagtgat accgtgcctt
     3961 tttgcaagtg atccagcaaa cgacccggcg ttgccacgat aatatgcggc gcatgttgca
     4021 acgaatcacg ctgcataccg aacggttgac caccgcacaa cgtcaaaatt ttggtatttg
     4081 gcagaaaacg cgccagccga cgcaattcac ctgccacctg atccgccagt tcacgcgtag
     4141 gacacagcac taaagcctgg gtttgaaata gcgacgcatc aatttgctgt aacaagccga
     4201 ggccaaaagc cgccgttttg ccgctgccgg ttttcgcctg cacgcgaaca tcttttccgg
     4261 caaggatcgc cggaagcgcg gcggcctgca ccggcgtcat ggttaaataa cccaactcat
     4321 taaggttcgt gagttgggcg ggaggcaaaa cattcagggt agaaaaagcg gtcacaatct
     4381 attctcgtgg tcatcgacgc aaagttagca ggcgcgtatc ctcgcagatc tacgctcacg
     4441 atgcgacaat ttaatcggtt cttcatcagg tggtgggtca ggcatgggtt gcgggcgagg
     4501 gatcggatcg ggcactggaa caggatcgcc aggaatcggt tcagggacag gaatttgcaa
     4561 ataaataagt gtcgtcatat ttccctccgg tcattgggtg gactcttaaa gggtagacgc
     4621 tgataaataa caggcaaaaa aaagccgact catcaaagtc ggcgtcgtac gaatcaattg
     4681 tgctatgcag taattcaaaa aaggaagtaa gacaatatgg agcgcaacgc ccatcgcttg
     4741 acgttgcatt cacctgcaag ggagatattg ccctgaatgg gtagagagtt tattgacttc
     4801 gctcaaactt tgcggcgttt ttgtatacag acagccggaa aaattgcttt tgttacaacc
     4861 atttactacg gtgcaaccat aaagcaacac caccaataag aacaactaac agaatacaaa
     4921 aaattgaaaa tccgaattgc cacccgccgc cagggatccc accaaggttg acgccaaata
     4981 acccggtcag aaaggtactg ggtaaaaaga ccattgccat caacgacatt gtataggtac
     5041 gacgagctaa attttcctgc atcacctgag cgatttcatc cgccatcacg ccagtccgtg
     5101 ctatacaggc gtcgatttcg tcaagaccgc gcccaaggcg atcggcaata tcctgcatcc
     5161 gacggcgttg gtcatcgctc atccacggca aacgttcact ggcaagacga gcataaacat
     5221 cacgttgcgg tgccatatag cgacgcatca caattaattg tttgcgcagc agagccagga
     5281 atccacgcgg tggaatttgc tgatcaagga gattatcttc aaggtcgata attttatcgt
     5341 gcagctgctc gataaattcg ctggaatgat cggtcaacgc atcgcacaca tccaccagcc
     5401 atcccccgca atcggtcgga cccgtgccct cttccagatc gctcaccaca tcgtccagcg
     5461 ccagcacttt gcgttgtcgg gtcgaaacaa ttaaccgccc gtccatatat acacgcatgg
     5521 cgaccagttg atcggggcgt tcatcggtgc tgccgtttat acagcgcaat gtaatcagcg
     5581 tgccttcacc gagacggctg actcggggcc gtgtgctctc gcccgccagc gcatcacgta
     5641 cgttattggg aagcagcggt gttgtcgcca gccattgggc gctttcatgg tgtacataat
     5701 taaggtggag ccagcaggga tgcgcttcat caatcacatc tgtattttcc agcggtttaa
     5761 cgccgcctct accatccagc atccaggcaa atactgcatc cgggacatta acgtccgatc
     5821 ccttaatcgc ttccacagtg cctccatcat caacgcatta ttttgtagtc tagccttctg
     5881 gccctgttac gcaacatctc atcaccccat taccctgaaa tgattaataa aattctgtct
     5941 aaattgaata caaaaagcaa aatgcttttc cgtatacaaa ccgtgtgaag tgttaaatag
     6001 cgtctatcat tatcagaatt atctgatcat atgacgtggc ttttttgcga tcggatagca
     6061 acaaaaattg ataaaaataa cgggatctca atgattacgc acaacttcaa taccctggac
     6121 ttactcacca gtcctgtctg gattgtttcg ccctttgagg aacagttaat ttatgccaat
     6181 agcgcggcgc gactgttgat gcaagacctc acgtttagtc agctacgaac cggaccctat
     6241 tccgtctcct cacaaaaaga actgccgaaa tacctctccg atctgcaaaa ccaacacgat
     6301 attatcgaaa tcctcactgt tcagcgtaaa gaagaggaaa cagcattaag ctgtcggctt
     6361 gttttgcgag agctgacaga aacagaaccg gtgattattt tcgaaggtat cgaagcgccg
     6421 gcaacgctgg gtttaaaagc cagtcgctcg gcaaattatc agcgcaaaaa acaaggtttt
     6481 tatgcgcgct tttttctgac taactctgca ccaatgttgt tgattgaccc ctcacgagat
     6541 ggccaaatcg tcgatgctaa cctcgccgcg ctcaatttct atggttataa ccatgaaacg
     6601 atgtgccaga aacatacctg ggaaattaat atgctcgggc gtcgcgtcat gcctatcatg
     6661 catgaaattt cgcatttacc cggcggtcat aaacctttga attttgttca taaactggcg
     6721 gatggatcta ctcgtcatgt gcagacctat gccgggccga ttgaaattta tggcgacaag
     6781 ctcatgttat gtattgtgca tgatattact gagcaaaaac ggctggagga gcagctggaa
     6841 catgctgctc accatgacgc gatgaccgga ttactgaatc ggcgacagtt ttatcacatt
     6901 accgagccag gccaaatgca gcatctcgcc atcgctcagg attacagctt gttgctcatc
     6961 gacaccgatc gttttaaaca cattaacgat ctctatgggc attctaaagg tgatgaggtg
     7021 ttatgcgccc tcgcccgcac ccttgaaagt tgcgctcgca aaggcgattt ggtgtttcgt
     7081 tggggaggcg aagagtttgt cttattgcta ccaagaaccc cactggatac cgcgctttcg
     7141 ctggctgaaa ctatccgtgt aagcgtggca aaagtgagta tttcgggctt accacgcttt
     7201 accgtcagca ttggtgtggc gcatcacgaa ggaaatgaaa gcatcgatga actgtttaaa
     7261 cgcgttgatg atgctttgta tcgggcgaaa aatgatggac gcaaccgcgt gctggcggca
     7321 taagccgcgg atgcgtctcg agatcaacgg ctgcgcttag cgtggcgctc ccagttttct
     7381 tgcttcgcct gcgccgtttt acgtagtgcg acgtaacacg ccccgctgcc gccatgatgc
     7441 ggtagcgcgg tgcaatatgc ctgaacatca tcaaattcgg tcagccagcg cgccacatag
     7501 ctgcggacaa tattggcatg cgatttatca tcccgtcctt tgccatgaat aatcagcacg
     7561 ttacgcaaac catcagccat ggcttgttga atgaaactga acatcatttt gcggcactct
     7621 tccaccggct ggcgcaaaag attcaggctc gcctgttgcg gatatttacc actgcgcagc
     7681 ttatccagca ccccatgttg caacccttcc cgccgaaact ccagcggctg acttagtggg
     7741 atgatgtcga gaaatccggt ggtgaggaaa ttatcaagct gcagcgtgtc gatacgctgc
     7801 ggcgcacgtt ggttacgcgt tggatgccag tggacatcgg tagcacgttt cagcggctgg
     7861 acatcttcca tggcgtcaag aaacagcgat ttgtcgtcaa ggttcatgtt acatcctccc
     7921 gcaattaaga gcgcgatatg ataaccagac cgggtcggtc caacaacgta ttacccaaaa
     7981 ttccagtaat aagttccaaa tattgccgat attttaagca aaatgct
//
LOCUS       DAPGWB010000188         8007 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.190, whole genome shotgun sequence.
ACCESSION   DAPGWB010000188 DAPGWB010000000
VERSION     DAPGWB010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 8007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8007
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.190"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..575)
                     /locus_tag="RHX79_004096"
     CDS             complement(<1..575)
                     /locus_tag="RHX79_004096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001331162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDV2199207.1"
                     /translation="MLLLIWWLTAAGVWATAGCAWIFQHLHWVTSQKSPGAFVFALAA
                     LIIGGLWLNNALKRLNVSGACLVYLLIILLVGFLFASLYTFSSIATVMGITGGMFAAM
                     ALICSCSNRVIPPVRQLYSYIFCGLSIAFVVNLILTSSFSVWLASILTVFIWGITAAC
                     EATTLEDLIRVADTSEISGSLRCIVPGAITL"
     gene            complement(781..1485)
                     /locus_tag="RHX79_004097"
     CDS             complement(781..1485)
                     /locus_tag="RHX79_004097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDV2199208.1"
                     /translation="MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAAN
                     SAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSS
                     IFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
                     LKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD
                     FINLFLMLLRIFGNRR"
     gene            complement(1622..2074)
                     /gene="moaE"
                     /locus_tag="RHX79_004098"
     CDS             complement(1622..2074)
                     /gene="moaE"
                     /locus_tag="RHX79_004098"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HDV2199209.1"
                     /translation="MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLG
                     DSVKALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSA
                     HRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW"
     gene            complement(2076..2321)
                     /gene="moaD"
                     /locus_tag="RHX79_004099"
     CDS             complement(2076..2321)
                     /gene="moaD"
                     /locus_tag="RHX79_004099"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HDV2199210.1"
                     /translation="MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMSAQSDRWAL
                     ALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG"
     gene            complement(2314..2799)
                     /gene="moaC"
                     /locus_tag="RHX79_004100"
     CDS             complement(2314..2799)
                     /gene="moaC"
                     /locus_tag="RHX79_004100"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDV2199211.1"
                     /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI
                     IDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETL
                     CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEAD
                     D"
     gene            complement(2802..3314)
                     /gene="moaB"
                     /locus_tag="RHX79_004101"
     CDS             complement(2802..3314)
                     /gene="moaB"
                     /locus_tag="RHX79_004101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HDV2199212.1"
                     /translation="MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHV
                     VDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF
                     GEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTR
                     PCNFHPHLKK"
     gene            complement(3336..4325)
                     /gene="moaA"
                     /locus_tag="RHX79_004102"
     CDS             complement(3336..4325)
                     /gene="moaA"
                     /locus_tag="RHX79_004102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDV2199213.1"
                     /translation="MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNK
                     GFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNG
                     YRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVK
                     VNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELL
                     RRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLF
                     GEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG"
     regulatory      complement(4313..4457)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            4722..5630
                     /gene="yvcK"
                     /locus_tag="RHX79_004103"
     CDS             4722..5630
                     /gene="yvcK"
                     /locus_tag="RHX79_004103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HDV2199214.1"
                     /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN
                     GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK
                     ALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTP
                     IQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMV
                     YIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVL
                     EASDIPYRHDRQLLHNALEKALQALG"
     gene            complement(5822..7843)
                     /gene="uvrB"
                     /locus_tag="RHX79_004104"
     CDS             complement(5822..7843)
                     /gene="uvrB"
                     /locus_tag="RHX79_004104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HDV2199215.1"
                     /translation="MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSG
                     KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV
                     PSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLH
                     LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD
                     EEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLE
                     NNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL
                     LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV
                     SATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL
                     VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE
                     GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG
                     ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVP
                     MDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS"
BASE COUNT         1971 a         2118 c         1998 g         1920 t
ORIGIN      
        1 tagagtgtta ttgccccagg aacgatacag cgaagagaac ctgaaatttc agaggtgtcg
       61 gcaacacgga tcaaatcttc cagtgttgtt gcttcacagg cagccgtaat gccccagata
      121 aagacagtca aaatactcgc taaccacacg gaaaaactgc tggtaaggat caggttaaca
      181 acaaaagcaa tactcaaacc acagaaaata tatgaatata actgtctgac tggtgggata
      241 accctattac tacaagagca aatcagcgcc attgcggcaa acatccctcc cgtaattccc
      301 attaccgtcg ctatgctcga aaaggtataa aggctggcga agagaaagcc aacaagaagg
      361 attattagca gatagaccag acatgcgcct gatacattca gtcttttcag ggcgttgttt
      421 aaccagagac cacctattat cagcgcagcc aaagcgaaga caaaagcacc tggagacttt
      481 tgtgacgtaa cccaatgcaa atgctgaaat atccaggcac agcctgccgt agcccatact
      541 ccagctgctg ttaaccacca aatgagaagc agcattttgc tgagcgaagc acttttttgc
      601 tgtaattgag tagcagtgga ttgtctgttc aaaataatgc gttatctgtc cctgaaatta
      661 cgtagtggac atagtctggc atttgccgcg attcagttct catgtaaatg agcggaatag
      721 tctttataaa atccgaaaaa aatcccggct ccaggccggg atcagcagga agaagagaat
      781 ttaacggcgg ttgccgaaga tccgcaacaa catcaggaac aggttgatga agtccagata
      841 caaggttaac gcgccaagaa tggaatattt gcgcaggttc gacgtgtcgc gggtatcaat
      901 ctgctcaccc atatttttca gtttctgcgt gtcatacgcc gtcaatccga caaagacaat
      961 cacgccgatg taggtaactg cccacatcaa tgcttcgctt ttcaaccaga agttgaccag
     1021 cgatgccagc acaatgccga ttaacgccat aaacagcata ttgccaaagc cacttaaatc
     1081 gcgcttcgtg gtgtaaccgt acaggctcat tgcgccgaac atcccggcag taacgacgaa
     1141 agtactggcg atagaagcag cggtatagac aatgaatata ctggaaagcg taagacccgt
     1201 cagcgccgaa taaagcataa agagcatcgt cgttacacct gcgctcagct tttgaatcat
     1261 cgctgataac acaataacca atgctaattg cgcgatgatc agaccgatta aaaagacacg
     1321 gttagtgaac aacagctcca tcacggccgc ggaattagcc gcataccagg caacaaatgc
     1381 ggtcagcaac aagccaacgg tcatccagcc atagacttgc gccatataag tttgcaagcc
     1441 agcccggggt tgtacgattg aatcagaacg tgggaatctg tccatgacga tctcctgaag
     1501 atataaggaa tatcttaagg atactgcaaa atgatgaggc tgtgcatcga cgcagcgtaa
     1561 acgtatgtac tgagcggtga aattgccgga cgcagcggtg ccttatccgg ctaacaaaaa
     1621 actaccagcg ttttgccgcc tgctgatcgc tctcccgggc ttcaacccag cggtcgcctt
     1681 ccggcgtggc ttcgcgcttc cagaacggtg cgcgggtttt gagataatcc ataataaact
     1741 gcccggcttc aaacgcactg ctgcgatgcg cactggtgac accgacaaaa acgatttcat
     1801 cgcccggcca taattccccg atgcggtgaa tcacagtgac gcgccccagc ggccagcggt
     1861 tacgcgcttc atcaacaatt tctgccagtg ctttttcagt catccccgga tagtgttcga
     1921 gggttaatgc tttgacgctg tcgcccaggt tatggttgcg caccttacca gtaaaggtga
     1981 ctaccgcacc gtcttcgtca cgctccgcca gccacgggta ctcttctcct acgctgaacg
     2041 gctgcggacc aacaacaatt ttggtttctg ccatcttaac ctccggttac cggcgggaag
     2101 aaagctactt cgtcgccgtc agtcagcgga tggtcaaaac tcaccagcgt ctggttgacg
     2161 gcagccagta atttgccatc ttccagcgcc agcgcccagc gatcgctctg cgcagacatg
     2221 tgctggcgta acgcttcaac agttgggaaa tccgcagcca cttcggttgc atctgttccc
     2281 accaactcgc gcacctgggc gaaaaaaaga actttaatca tccgcttcca ccttaaagtc
     2341 acccgacttg ccgccgctct tcgccagcaa acgtaccgga ccaatcacca tatctttttg
     2401 caccgctttg cacatgtcat aaatggtcag cgccgccacg gaggccgcgg ttaatgcttc
     2461 catttcgaca ccggttttcc cggtcaggcg gcataaggtt tctatacgca cccgattgtg
     2521 ctccggctcg gcctgtaaat tgacttcaac tttgctgagc atcagcggat gacagagcgg
     2581 gatcagatcc caggtgcgtt ttgccgcctg aataccggca atacgcgcag tggcaaatac
     2641 gtcgcctttg tggtggcgac catcaataat catcgccagc gtctcgctgc gcatggtgac
     2701 aaaggcttcc gcccgcgctt cacgcacggt ttccgctttg gcggagacat ccaccatgtg
     2761 cgcttcgcca gcggcgttga tatgggtcag ttgcgacata cttatttctt caaatgtgga
     2821 tggaaattac acggacgcgt acgggcatcc agctgcggcg cgatgatatt ttcccatgcg
     2881 gtacggcacg ctttggtcga acccggcatg gcgaaaatca gcgttttgtt ggcgacgccc
     2941 gctaccgcac gagattgcaa cgtggaagtg ccaatctctt caaaagacaa catccggaac
     3001 acttcaccaa aaccttcaac ttcacggtcg aacaacggca gcaatgcttc gggagcctga
     3061 tcaccttccg tcaggccagt accacccgta atcaatacca cttgtacatc gtcgctggcg
     3121 atccacgcag atacctgagc gcgaatagcg tagcggtttt ctttcacaat ggctttatcg
     3181 acaacgtgat ggcccgcttc ttgcgccgaa tcgcgcagat agtgaccgga ggtatcgtct
     3241 tcttcaccgc gacgattaga aaccgtaaga atagcaatac gggtcgggat aaattcagtg
     3301 cttacctgac tcatctgatc tctccttttg acgttttagc cgccaatgta cgataagttt
     3361 tgcgtaatac cggtgttgtt ttgatgcagg aaatgggtct gtttcttctc ccgcagcgcc
     3421 gctgaaatac gcgcttccag cgcctgttgc tgggtatcgt cttccagcag atcgcgcagg
     3481 ttaacgccgc cttcaccaaa caggcagaga tggagtttac caatggagga aacgcgcagg
     3541 cggttgcaag tggcgcagaa gtctttttca tacggcatga taaggccaat ctctccggcg
     3601 taatctggat ggcaaaagac ttgcgcggga ccgtcgctgc gttgacgtaa ttggtggatc
     3661 cagccgcgac gcagtagctc gtcacgcaga acctgaccag agatgtgatg cttacggaag
     3721 agctcgctgc cctcgcccgt ttccatcagt tcgatgaaac gcagctggat agggcgatgc
     3781 tggatccagt tcagaaaggt gtcgagctgg tgatgattaa catcacgcat cagcacggta
     3841 ttgactttga ccttctcaaa accggcctca aatgcagcat caatccccgc catgacctgg
     3901 ttgaatttat cctgcccggt aatagcgtga aactggcggg cgtccagact gtcgacactg
     3961 acgttaatgc cagtaagtcc cgcatcgcgc cagttcgcca catcgcgttc cagacggtaa
     4021 ccattggtgg tgaccgcaat ctggcggata gcgtcgtttt cccgcacagc ggcgatgata
     4081 tcggtaaagt cgcggcgtaa agacggctca ccgcctgtca ggcgcacttt ttcggtgccc
     4141 agactggcga aggcgcgcgt aacccggcga atttcatcga cggtaagaaa gcctttattg
     4201 gtgacgccgc tcggtttgta gccatccggc aggcagtagg tgcaacgaaa gttacacaca
     4261 tcggtaatcg acaggcgcaa gtagtaaaac ttacgcgcaa atgcatcagt cagttgtgaa
     4321 gccatgtaca cctttccaga tacgggaggc gaagtcattt cttccttcgc cctggtggca
     4381 atctttacga gcattgtcac ggccaaagca ccgtatcagt tgacccaggt gcagaggcta
     4441 gagtgtttag tggttatgcc gatactagcg tgtaaatgag atttttacca tccacacttt
     4501 cgctatgtaa tcatgtatat agcgtcatga tcgtgctatt tcgctacaga ataagggaaa
     4561 atggcggctt tactttgata tacatcatca gggaggcata gcgtgcatcg tcctttagag
     4621 gtagaagaaa atagtttgta tcctcaatat tggcaggtta attgctgttt ccccgcaatt
     4681 tgcgctactg tagcgcggat aatctgactc caggaaacta tatgcgcaat cgtacgctgg
     4741 ctgatcttga tcgtgtcgtt gctctcggcg gagggcatgg actgggacgc gttctctcat
     4801 cactttcgtc tttgggttct cgtttaacgg gtatcgtcac caccaccgat aatggtggct
     4861 cgacggggcg tattcgccgt tcagaaggcg gcattgcctg gggcgatatg cgcaactgcc
     4921 tcaaccagct gataacggaa ccgagcgtcg cctccgcgat gtttgaatac cgttttggtg
     4981 gcaatggcga actttccggt cataatctcg gaaacttgat gttaaaggcg ctggatcacc
     5041 ttagcgtgcg gcctctggaa gccatcaatt taattcgtaa tctgctgaaa gtggatacgc
     5101 atttgattcc aatgtcagag catcctgttg atctgatggc gattgacgat caggggcatg
     5161 aagtttacgg cgaggtcaat atcgaccagt taactacgcc gattcaagag ttattgttaa
     5221 cgcctaatgt acccgcaacg cgtgaggcgg ttcacgctat caatgaagcg gatctcatca
     5281 ttattgggcc tggcagtttt tataccagcc tgatgccaat tctgctgctg aaggaaatcg
     5341 cccaggcatt acgccgcacg ccagcgccga tggtttatat cggcaatctg gggcgtgagt
     5401 tgagtttacc tgcggctaat ttgaagctgg aaagcaagct ggcaattatg gagcagtatg
     5461 ttggtaaaaa ggtcattgat gcggtcatcg tcgggccaaa agtggatgtc tcggcggtga
     5521 aagagcggat tgtgattcag gaggtactgg aggccagcga tattccgtat cgtcatgacc
     5581 gccagttgtt acataacgcg ctggaaaagg cgttacaggc tttaggttaa cggaaatccg
     5641 aagaaaaatt ccggcttcct attgaagaca aagtgcgcgt tgtttatgcc ggatgcggcg
     5701 tgaacgcctt atccggccta caaaccgcgc taattcaatg tattgcagag atcatgtagg
     5761 cctgataagc gtagcacatc aggctgtttt ccgtttgtca tcagtcttct tcgctatcct
     5821 gttacgatgc ggcaataaac aactcacgca actgatgcaa ctggtcacga atttgtgccg
     5881 cttcttcgaa ctccagattc tgcgcgtgtt gcatcatcag cccttccagt tcatggattt
     5941 tctgctgcaa cgctttcggc gacatatcca tcggcacatt atccggctca acaatcgggc
     6001 gcgattttcc tctgcccttc gctttggttt tggcaatgtt ctgccccagc gccaggatat
     6061 cgaccacttt cttgttcaag ccttgcggcg taatgccgtg ttcctcgttg tacttctgct
     6121 gtttctcacg gcgacgttcg gtttcgccaa tcgctttcgc cattgatggg gtgatcttat
     6181 cgccgtagag aatcgcttta ccgttaacgt tacgtgccgc acgaccaatg gtctggatca
     6241 acgaacgttc ggaacgcagg aagccttctt tgtcagcgtc gaggatcgcc accagcgaca
     6301 cttccggcat atccagacct tcgcgcagta agttgatccc taccagcacg tcgaactcac
     6361 ccagacgcaa gtcgcggata atctccatac gttcgacggt gtcgatatct gagtgaagat
     6421 aacgcacgcg ctcgccatgt tcttcgagat attcggtaag atcttccgcc atccgcttgg
     6481 tcagtgtggt gaccagtacg cgttcgttaa ttgccgctcg ctgacgaatc tccgaaagaa
     6541 gatcatcaac ctgtgtcgcc accggccgca cttcgataat cgggtcaagc aatccggttg
     6601 gacgcaccac ctgatccacc acatcgccgc cggatttttc cagctcgtaa ttacccggcg
     6661 tcgccgaaac atagatggtt tgcggcgcta atgcttcgaa ctcttcaaac ttaagcggac
     6721 ggttatccag cgctgatggc aggcggaagc cgtactccac cagtgtctct ttacgcgccc
     6781 ggtcaccgcg atacatgccg ccaatttgtg gaatggtgac gtgagattca tcgaccacca
     6841 gcagcccatc ggcagggagg taatcaaaca gcgtcggcgg tggctcaccc ggtccacgac
     6901 cggagaggaa gcgcgagtag ttttcaatcc ccgaacagta gcccagctcg ttcatcatct
     6961 ccagatcaaa ctgggtacgc tgggtcagcc gctgctcttc cagcagtttg ttgttttcca
     7021 acagcacttt gcgtctggcg gccagctctt ctttgatctc ctccatcgcc tgtacgatgc
     7081 gctcgcgcgg tgtgacgtag tgcgttttcg ggtagatggt aaaacgtgga atagtggaaa
     7141 caatctgccc ggtcagcggg tcaaataacg acaatcgttc cacttcctcg tcaaacagtt
     7201 ccacgcgaag tgcaatgtca tccgattctg ccgggaagat atctatcacc tcgccacgaa
     7261 cgcggaaagt accacgctgg aatgcttgat cattacgagc gtattgcagc tccgccagtc
     7321 ggcgcagaat cgcgcgctga tcgataatca taccgaccgt gagatggagc atcatcttga
     7381 gatataaatc aggatcgccc agaccataaa tcgcggaaac agacgccacc acaaccacat
     7441 cacgccgctc cagcatcgct ttggtggcgg acaaacgcat ctgctcaata tgttcgttaa
     7501 ccgaggcatc tttctcaatg aaagtgtcgg aactcggtac ataggcttcc ggctgatagt
     7561 agtcgtagta ggaaacgaaa tattccaccg cgttttccgg gaagaactct ttcatttcgc
     7621 catacagctg ggccgccagc gttttgttgg gcgcaagtac catggttggg cgctgaaggt
     7681 cagcaatgac attggcaatg gtgaatgttt tcccggagcc agtcacgcca agtaacgtct
     7741 ggtgcgccag gccatcttcc agcccctctt cgagacgtcg aatcgcctct ggctgatcgc
     7801 cagaaggttt aaaagcggaa ttcagtttga acggtttact catgagtcgc tacctgaagg
     7861 agttgggcgg gcaggtatgt aattttactc gtcgtactta attatgccaa caaattatac
     7921 tggataaaaa aacagttcat caccataata tttctgttac agcgtaaact ccgctgtcaa
     7981 tcatgagcaa aatttactct gtggcga
//
LOCUS       DAPGWB010000189         7926 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.191, whole genome shotgun sequence.
ACCESSION   DAPGWB010000189 DAPGWB010000000
VERSION     DAPGWB010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7926
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.191"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..744
                     /locus_tag="RHX79_004105"
     CDS             <1..744
                     /locus_tag="RHX79_004105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001560258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2713 family protein"
                     /protein_id="HDV2199216.1"
                     /translation="NVFLIEQINDLKMWVNKYIDDCTDEDLNDRDFIASVVDRAIFHF
                     AINSICNPGDNKDATPIEQCTFDVETKNGLPSTVQLFYEESKDNEPLANIHFQAIGSG
                     FLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQ
                     RDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKS
                     FDPTSKEEIKILTDTSKLIYDLFGVKSEK"
     gene            1107..2144
                     /gene="dusA"
                     /locus_tag="RHX79_004106"
     CDS             1107..2144
                     /gene="dusA"
                     /locus_tag="RHX79_004106"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HDV2199217.1"
                     /translation="MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYF
                     LRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEA
                     RGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDD
                     QDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDF
                     PHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDADPV
                     AVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVL
                     EHALKLVADKR"
     gene            2278..2520
                     /gene="pspG"
                     /locus_tag="RHX79_004107"
     CDS             2278..2520
                     /gene="pspG"
                     /locus_tag="RHX79_004107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response protein PspG"
                     /protein_id="HDV2199218.1"
                     /translation="MLELLFVFGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALM
                     IKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY"
     gene            complement(2686..3669)
                     /locus_tag="RHX79_004108"
     CDS             complement(2686..3669)
                     /locus_tag="RHX79_004108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HDV2199219.1"
                     /translation="MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFID
                     TYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIN
                     ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW
                     AKALGAKLIGTVGTAQKAQSALKAGAWQVINYREENLVERLKEITGGKKVRVVYDSVG
                     RDTWERSLDCLQRRGLMISFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL
                     TEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP"
     gene            3752..5167
                     /gene="dnaB"
                     /locus_tag="RHX79_004109"
     CDS             3752..5167
                     /gene="dnaB"
                     /locus_tag="RHX79_004109"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDV2199220.1"
                     /translation="MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLD
                     NERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGG
                     FAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDL
                     AESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKT
                     AGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASL
                     SRVDQTKIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTPTEVRSRARRIAREH
                     GGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQR
                     ADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR
                     LTFNGQWSRFDNYAGPQYDDE"
     gene            5220..6299
                     /gene="alr"
                     /locus_tag="RHX79_004110"
     CDS             5220..6299
                     /gene="alr"
                     /locus_tag="RHX79_004110"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDV2199221.1"
                     /translation="MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLE
                     TARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNE
                     EQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHF
                     ARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVS
                     PLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGD
                     GYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERI
                     AEMTKVSAYELITRLTSRVAMKYVD"
     gene            6552..7745
                     /gene="tyrB"
                     /locus_tag="RHX79_004111"
     CDS             6552..7745
                     /gene="tyrB"
                     /locus_tag="RHX79_004111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HDV2199222.1"
                     /translation="MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIP
                     QLQAVAEAEARLNAQPHGASLYLPMEGLNSYRHAIAPLLFGADHPVLQQQRVATIQTL
                     GGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF
                     NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGF
                     GAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVLCEDAEAAGRVLGQL
                     KATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEM
                     PERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKA
                     FAAVM"
BASE COUNT         1928 a         1879 c         2060 g         2059 t
ORIGIN      
        1 aatgtgtttt taattgagca aataaatgat ctcaaaatgt gggtcaataa gtatattgac
       61 gattgcactg atgaggattt aaacgatcgt gactttattg catcagttgt tgaccgggct
      121 atttttcatt tcgcgattaa tagtatatgt aatcctgggg ataataaaga tgcgactccc
      181 attgaacaat gtacttttga tgtagaaact aagaatggcc ttccctccac ggttcagcta
      241 ttttatgagg aatctaagga taatgaacct ttagcgaata tacattttca agcaataggt
      301 tctggttttt taacgtttgt taatgcctgc caggaacatg atgacaacag cttaaaatta
      361 tttgcttcgc tgttaatttc actttcatat tctagtgcct acgcagattt atcagaaaca
      421 gtgtatatta atgaaaataa tgagagctac ctgaaagctc agtttgaaaa attatctcaa
      481 cgtgatatga agaagtacct gggagagatg aagcgtctgg ctgatggggg agaaatgaat
      541 tttgatggct atctggataa gatgtcacat ctggtgaatg aaggaacgct cgatcctgat
      601 attttaagca aaatgcgaga tgctgcacca caattaatta gcttcgcgaa gtcgtttgac
      661 ccaacctcaa aggaagagat taaaatactt acagacactt ctaaattaat ttatgatttg
      721 ttcggggtta aatcggagaa ataatatgtg aagttcttcg atagtatgga aggcattata
      781 taaaaggacc caatatttat tgggttcttt tttctctatc aatgctatta gcagggagat
      841 atatcaccag agtttaatgt gtgatttttt atttatcgtc gaacctggat tgtttatcat
      901 tggccttaac aaagttaacg gctaataaga ttatttccat cacttcgtga gagcttcatg
      961 ccttgagagg atctcaattt tcttttgcaa tgagacaggc gcttcctgtt gttatggtat
     1021 agtaccccgc tattgagcct cctgaatagt gatgctgaat aacataaacc catgatatat
     1081 cgataaaata atctctacat ttgaaaatgc acggtaattc tgaaatgcaa aaaatcaacc
     1141 aaaccagcgc aatgcctgaa aaaactgacg ttcactggag tggtcggttt agcgttgcac
     1201 caatgctcga ctggacggac agacattgcc gctatttctt gcgtctgctt tcccgcaata
     1261 cgttgctgta taccgaaatg gtgaccacag gggcgattat tcacggtaaa ggtgattatc
     1321 tggcgtacag tgaagaagaa catccggtag cgttgcaact gggcggtagc gatccggcgg
     1381 cgctggcgca gtgtgcaaag ctggcagaag cgcgcggata tgatgagatc aacctgaatg
     1441 tcggctgccc gtctgaccgg gtgcagaacg gcatgtttgg tgcgtgtctg atgggtaatg
     1501 cgcagctggt tgccgactgc gtgaaagcga tgcgcgatgt ggtgtcgatt ccagtgacgg
     1561 tgaaaacgcg tattggcatc gatgaccagg acagctatga atttctctgc gatttcatca
     1621 acaccgtttc cggcaaaggc gagtgtgaga tgtttatcat ccacgcacgt aaagcctggc
     1681 tttcggggtt aagcccgaaa gaaaaccgtg aaatcccgcc gctcgattat ccgcgtgtgt
     1741 atcaactgaa gcgtgacttt ccgcatctga caatgtcgat taacggtggt atcaagtcgc
     1801 tggaagaggc caaagcacac ctgcaacata tggatggcgt gatggtcggg cgcgaggcgt
     1861 atcagaatcc gggtattctg gcggcggtag accgggagat ctttggttcc tcggataccg
     1921 atgccgatcc agtggcggta gtgcgcgcca tgtatccgta cattgagcgt gaactcagcc
     1981 aggggacgta tctcggccat attacccggc atatgttggg cttgttccag ggtattcctg
     2041 gcgcgcggca gtggcggcgt tatttaagtg aaaatgccca taaagcgggt gcagacatta
     2101 atgtgctgga acacgcgctc aaactggtgg cggataagcg ttaacttttc accaaaaagt
     2161 agtcaaattc accacgccct gcgcaccgtc gcggggcgtt ttgctgttaa atcaatagat
     2221 tatttttggc atgattcttg taatgccagc aagagatttc atatttggga gagcatcatg
     2281 ctggaactac tttttgtgtt tggctttttt gtcatgctga tggtcaccgg cgtttcgttg
     2341 ctgggcatta tcgccgcgct ggttgtggcg acggccatta tgttcctcgg cggtatgctg
     2401 gcattgatga ttaagttgct gccgtggtta ctactggcga ttgcggtggt gtgggttatt
     2461 aaggcgatta aagcaccaaa agtgccgaaa tatcagcgtt atgaccgctg gcgttactaa
     2521 gggattgtgc ggatgatcac aacctaaggt tttatcctta gaacaaaata ggaattgata
     2581 atcaaatctg tcactattgc gcctctaaca gattcatcgt gctgtaccct acatacagcc
     2641 gaactataaa aagaaagggc ttcccaggtg gaagccctat ttcttttatg gaatcagcag
     2701 gctggaacct tgcgtcgccc ggctttccag aatctcatgc gcacgctgcg catccttcag
     2761 cggatatttc tgctgctcgg cgacatcgac cttaatcaca ccgctggcaa tcaaagagaa
     2821 cagttcatta ctggcctcgg ttaattcctc ccgcgtggtg atatagcctt gcagggaagg
     2881 gcgtgtcaca tacaacgagc ctttttgatt gagaatgcct aagttcacac cggtaaccgc
     2941 acctgatgag ttgccaaaac tgatcattaa gccgcggcgt tgcaggcaat ccagcgaccg
     3001 ttcccaggtg tctctgccca cggaatcgta cactacgcgc actttcttac cgccggtgat
     3061 ctctttcaat cgctcgacca gattctcttc acgatagtta ataacctgcc acgcgccggc
     3121 ttttagcgcg ctctgcgctt tttgcgcggt tcctacggtg ccgataagtt tcgcgcccag
     3181 ggcttttgcc cactggcagg caattaagcc aacgccgcca gccgctgcgt ggaacaggaa
     3241 ctgttcatcg ggtttaattt cataggtttt gcgcagcaga taataaaccg ttaagccttt
     3301 caggaaagat gctgcagctt gttcaaaaga aattgccgca ggcagaatcg ccgctttatc
     3361 cgcattaatg ttatgcacag agctgtaagc gcctaacgcc gactgcgcat agactacacg
     3421 atcgcctgcc ttaatatgct ttacaccact gccgacttta ctcacgatgc ctgccgcttc
     3481 ggtacctaat ccgctgggta gtgatggcgg cgggtaaagg ccgctgcgga tatacgtgtc
     3541 gataaaattg atgccgatgg ctttattttc gacctggatt tcattctctg ccggatcggc
     3601 aggagtgaac tctacggctt gaagtacttc cgggccaccg tgcttgtgaa attcaattcg
     3661 tgttgccatg tgtcctccag aacgtatcgt cagggtctgc ttcatatggt aaagtttcga
     3721 cccattcttt atctcggtaa ctccattcac tatggcagga aataaaccct tcaacaaaca
     3781 gcaggctgaa ccccgcgaac gcgatccaca agttgccggg ctgaaagtgc ctccgcactc
     3841 gatcgaagcg gagcagtcgg tgttgggcgg tttaatgctg gataacgaac gctgggacga
     3901 tgtagccgag cgtgtggtgg cagacgattt ttacacccgc ccacaccgcc atatctttac
     3961 tgaaatggcg cgtttgcagg aaagcggtag tcctatcgat ctgattaccc ttgcggaatc
     4021 gctggaacgc caggggcaac tcgatagcgt cggtggtttt gcttatctgg cagagctgtc
     4081 aaaaaatacg ccaagtgcgg cgaacatcag tgcctatgcg gacatcgtgc gtgaacgtgc
     4141 cgttgtccgt gagatgatct cggttgcgaa tgagattgct gaagccggtt ttgatccgca
     4201 ggggcgtacc agcgaagatc tgctggacct tgctgaatcc cgcgtcttta aaattgccga
     4261 aagtcgtgca aacaaagacg aagggccgaa gaacatcgcc gatgtgctcg acgcaaccgt
     4321 ggcgcgtatt gagcagttgt ttcagcagcc acacgatggc gttaccggag taaacaccgg
     4381 ttatgacgat ctcaacaaaa aaaccgctgg cttgcagccg tcggatttga tcatcgtcgc
     4441 cgcgcgtccg tcgatgggta aaacaacatt tgcgatgaac ctcgtcgaaa acgcggcgat
     4501 gttgcaggat aaaccggtac ttatcttctc gctggagatg ccttcagaac agattatgat
     4561 gcgttctctg gcgtcgctgt cgcgcgttga ccagactaaa atccgtaccg ggcagctcga
     4621 tgatgaagac tgggcgcgca tttccggcac catgggtatt ttgctcgaaa aacgcaatat
     4681 ctatatcgat gactcttccg gcctgacgcc aacggaagtg cgttcccgcg cacgccgtat
     4741 tgcccgtgaa cacggcggca tcgggcttat catgatcgac tacctgcaac tgatgcgcgt
     4801 accggcgctt tccgataacc gtacgctgga aattgcagaa atctcccgct cgctgaaagc
     4861 actggcgaaa gaactgaacg tgccggtggt ggcgctgtcc cagttgaacc gttctctgga
     4921 acaacgtgcc gacaaacgcc cggtcaactc cgacctgcgt gaatctggct ctatcgagca
     4981 ggatgcggac ttgatcatgt ttatctatcg tgatgaggtg tatcacgaaa acagtgattt
     5041 aaaaggcatc gcggaaatta ttatcggtaa acaacgtaac ggcccaatcg ggacggtacg
     5101 cctgaccttt aacggtcaat ggtcgcgctt cgacaactat gcggggccgc agtacgacga
     5161 cgaataataa ttattttatg aattaggtaa ttaaagcaaa cacttatcaa ggaacacaaa
     5221 tgcaagcggc aactgttgtg attaaccgcc gcgctctgcg acacaacctg caacgtcttc
     5281 gtgaactggc acctgccagt aaaatggttg cggtggtgaa agcgaacgct tatggtcacg
     5341 gtcttcttga gaccgcgcga acgctccccg atgctgacgc ctttggcgta gcccgtctcg
     5401 aagaagctct gcgactgcgt gcggggggaa tcaccaaacc tgtactgtta ctcgaaggct
     5461 tttttgatgc cagagatctg ccgacgattt ctgcgcaaca ttttcatacc gccgtgcata
     5521 acgaagaaca gctggctgcg ctggaagagg ctagcctgga cgagccggtt accgtctgga
     5581 tgaaactcga taccggtatg caccgtctgg gcgtaaggcc ggaacaggct gaggcgtttt
     5641 atcatcgcct gacccagtgc aaaaacgttc gtcagccggt gaatatcgtc agccattttg
     5701 cgcgcgcgga tgaaccaaaa tgtggcgcaa ccgagaaaca actcgctatc tttaatacct
     5761 tttgcgaagg caaacctggt caacgttcca ttgccgcatc gggtggcatt ctgctgtggc
     5821 cacagtcgca ttttgactgg gtgcgcccgg gcatcattct ttatggcgtc tcgccgctgg
     5881 aagatcgctc caccggtgcc gattttggct gtcagccagt gatgtcacta acctccagcc
     5941 tgattgccgt gcgtgagcat aaagccggag aacctgttgg ttatggtgga acctgggtaa
     6001 gcgaacgtga tacccgtctt ggcgtagtcg cgatgggcta tggcgatggt tatccgcgcg
     6061 ccgcgccgtc cggtacgcca gtgctggtga acggtcgcga agtaccgatt gtcgggcgcg
     6121 tggcgatgga tatgatctgc gtagacttag gtccacaggc gcaggacaaa gccggggatc
     6181 cggtcatttt atggggcgaa ggtttgcccg tagaacgtat cgctgaaatg acgaaagtaa
     6241 gcgcttacga acttattacg cgcctgactt caagggtcgc gatgaaatac gtggattaat
     6301 cgttctgtaa tatttgattg tctgtgccgg atgcggcgtg aatgccttat ccggccaata
     6361 aaatcctaaa aattcaataa gttgatgttc tttcatgctc ttataaaggt cgtgcctctg
     6421 gcggatgtac gtttgtcatg agtctcactc tgttgctaat tgccgttcgc tcctgaacat
     6481 ccactcgatc ttcgccttct tccggtttat tgtgttttaa ccacctgccc gtaaacctgg
     6541 agaaccatcg cgtgtttcaa aaagttgacg cctacgctgg cgacccgatt cttacgctta
     6601 tggagcgttt taaagaagac cctcgcagcg acaaagtgaa tttaagtatc ggtctgtact
     6661 acaacgaaga cggaattatt ccacaactgc aagccgtggc ggaggcggaa gcgcgcctga
     6721 atgcgcagcc tcatggcgct tcgctttatt taccgatgga agggcttaac agctatcgcc
     6781 atgccattgc gccgctgctg tttggtgcgg accatccagt actgcaacaa cagcgcgtag
     6841 caaccattca aacccttggc ggctcagggg cattgaaagt gggcgcggat ttcctgaaac
     6901 gctacttccc ggaatcaggc gtctgggtca gcgatcctac ctgggaaaac cacgtagcaa
     6961 tattcgccgg ggctggattc gaagtgagta cttacccctg gtatgacgaa gcgactaacg
     7021 gcgtgcgctt taatgacctg ttggcgacgc tgaaaacatt acctgcccgc agtattgtgt
     7081 tgctgcatcc atgttgccac aacccaacgg gtgccgatct cactaatgac cagtgggatg
     7141 cggtgattga aattctcaaa gcccgcgagc ttattccatt cctcgatatt gcctatcaag
     7201 gatttggtgc cggtatggaa gaggatgcct acgctattcg cgccattgcc agcgctggat
     7261 tacccgctct ggtgagcaat tcgttctcga aaattttctc cctttacggc gagcgcgtcg
     7321 gcggactttc tgttctgtgt gaagatgccg aagccgctgg ccgcgtactg gggcaattga
     7381 aagcaacagt tcgccgcaac tactccagcc cgccgaattt tggtgcgcag gtggtggctg
     7441 cagtgctgaa tgacgaggca ttgaaagcca gctggctggc ggaagtagaa gagatgcgta
     7501 ctcgcattct ggcaatgcgt caggaactgg tgaaggtatt aagcacagag atgccagaac
     7561 gcaatttcga ttatctgctt aatcagcgcg gcatgttcag ttataccggt ttaagtgccg
     7621 ctcaggttga ccgactacgt gaagaatttg gtgtctatct catcgccagc ggtcgcatgt
     7681 gtgtcgccgg gttaaatacg gcaaatgtac aacgtgtggc aaaggcgttt gctgcggtga
     7741 tgtaatgcag gaaagcaggc tggagctacc cagcctgcag tgaaattaaa ctgtcgtcgc
     7801 tttcactctt tctttataga tgattttttt gatgccgttg ttctacgtga gagataataa
     7861 aacgttgtca gttcttttat tgttaagttt atcccaatta tctggaattc ctttccctat
     7921 tttttc
//
LOCUS       DAPGWB010000190         7902 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.192, whole genome shotgun sequence.
ACCESSION   DAPGWB010000190 DAPGWB010000000
VERSION     DAPGWB010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7902)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7902)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7902
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.192"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..252)
                     /locus_tag="RHX79_004112"
     CDS             complement(<1..252)
                     /locus_tag="RHX79_004112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV2199223.1"
                     /translation="MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTP
                     ETLRVWVRQHERDTGGGDGGLTSAERQRLKELERENRELR"
     gene            441..1025
                     /locus_tag="RHX79_004113"
     CDS             441..1025
                     /locus_tag="RHX79_004113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000517560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199224.1"
                     /translation="MGKMKELLFEIQEERTDEWIAENYTDAEEGTPEWDAAAQEYSWF
                     QDWMEEAAEQQYFEASLASIPDRLQDAKDELFELENLMQFNQPGIVERMAYVHCVSVL
                     DSFLMYSARALLNHPPHLQRFLQVADSLIANKEDRRKLRASKWVEQEPDTATPEKVYT
                     WRAQSLVAKKTFQSHKVIDRYFSTMLATPHEWPL"
     gene            1268..1789
                     /locus_tag="RHX79_004114"
                     /pseudo
     CDS             1268..1789
                     /locus_tag="RHX79_004114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001298872.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            1970..2614
                     /locus_tag="RHX79_004115"
     CDS             1970..2614
                     /locus_tag="RHX79_004115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001144037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDV2199225.1"
                     /translation="MPVIANTHPKGGVGKTTSSVNIVGEMKSDTVDLDTHTGLSIILG
                     LRPEGKEISVKVPKTVDELIEIMTPYKNSDKTLLIDCGGFDSDLTRTAIAFADCVIVP
                     SKDSLTERIGLMHFDGVLDEISSIMGTDITAHLYLCKVNPNKKKFPKLDAILPSFKHL
                     KLMKSRISARAEFEDVIETGMGITESVHGRYSAGGKEVIALIEEINHLIENNKQ"
     gene            2701..3009
                     /locus_tag="RHX79_004116"
     CDS             2701..3009
                     /locus_tag="RHX79_004116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000030202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone GroEL"
                     /protein_id="HDV2199226.1"
                     /translation="MSKAKFSAQAEKLKNLVDSARLQTSSSAVTATVPSQPNEGTEEV
                     SGRPVAARTKAKNLKAIPLSYFEAHAELKATSKTSLDFSSYIIEAIREKLERDGAIGQ
                     "
     gene            3423..4403
                     /locus_tag="RHX79_004117"
     CDS             3423..4403
                     /locus_tag="RHX79_004117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001401593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid segregation protein ParM"
                     /protein_id="HDV2199227.1"
                     /translation="MKIFIDDGSTNIKLAWLEDGDVKTLISPNSFKPEWSFSLLDDAA
                     PANYEIDGEKFSFDPLSADAVVTTETRYQYSDVNVVAIQHALQQTGLKAQPIDVIVTL
                     PISEYLDANNQKNKQNIERKKKNVMREVRVQGSDAFVIRSVSVLPESIPAGFSVLAGL
                     EDDESLLIVDLGGTTLDVSHVRSKMTGITKTWCDPNIGVSLITSGVKEQMAVHANTRV
                     SSFQADNIIVHRNEPDYLSRRIYNAEQRESIINVINERQKLLIKRVNDVISRFTDYTH
                     VMCVGGGAEIVAEAVKNLTKVPDERFYLSSSPQFDLVMGMIKMKGGVTNE"
     gene            4396..4812
                     /locus_tag="RHX79_004118"
     CDS             4396..4812
                     /locus_tag="RHX79_004118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid partitioning/stability family protein"
                     /protein_id="HDV2199228.1"
                     /translation="MSDENKSRRCSFELFPDERTGDKIADELIANEKLKERGRFMRAM
                     LVTGAAFAAIDKRLPLLISELLTENTTLDDINKVISSVIPGAFSVEKKLLELLEKQSG
                     LHTSVDCSTPLTEQSLSRNDGEDQTRRNAENMFGDD"
     gene            complement(4814..5781)
                     /gene="umuC"
                     /locus_tag="RHX79_004119"
                     /pseudo
     CDS             complement(4814..5781)
                     /gene="umuC"
                     /locus_tag="RHX79_004119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566943.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V subunit
                     UmuC"
     gene            complement(5771..6190)
                     /gene="umuD"
                     /locus_tag="RHX79_004120"
     CDS             complement(5771..6190)
                     /gene="umuD"
                     /locus_tag="RHX79_004120"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000109083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HDV2199229.1"
                     /translation="MSTVYHRPADPSGNDSYVRPLFADRCQAGFPSPATDYAEQELDL
                     NSYCISRPAATFFLRASGESMNQAGVQNGDLLVVDRAEKPQHGDIVIAEIDGEFTVKR
                     LLLRPRPALEPVSDSPEFRTLYPENICIFGVVTHVVH"
     gene            complement(6187..6435)
                     /locus_tag="RHX79_004121"
     CDS             complement(6187..6435)
                     /locus_tag="RHX79_004121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001697964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI-like family protein"
                     /protein_id="HDV2199230.1"
                     /translation="MIRIEILFDRQSTKNLKSGTLQALQNEIERRLKPHYPEIWLRID
                     QGSAPSVSVTGARNDKDKERILSLLEEIWQDDSWLPAA"
     gene            7458..>7902
                     /locus_tag="RHX79_004122"
     CDS             7458..>7902
                     /locus_tag="RHX79_004122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase N-terminal
                     domain-containing protein"
                     /protein_id="HDV2199231.1"
                     /translation="MTEQATTCKGASLLNGDSWHSINWRQCYREVRRLQARIVKATRE
                     GKHGKVKSLQWILTHSFSGRAVAVRRVTENSGKRTPGVDGQTWSSPEVKFLAINLLKR
                     RGYKPQPLKRVYIPKSNGKSRPLGIPTMKDRAMQALYLLALEPVAE"
BASE COUNT         2007 a         1785 c         2006 g         2104 t
ORIGIN      
        1 gcgcagttca cgattttcac gttccagctc tttcagacgc tgacgttcag cgctggtgag
       61 cccaccatca ccgcccccgg tatcccgctc atgctggcga acccagacac gcagagtctc
      121 cggcgtacag ccaatctttg gggcaatgga acaaattgcc gcccactgtg agtcatattc
      181 gccctgactt tccagaacca tacgaactgc gcgttgacgg acttcggggg aaaaacgagt
      241 atttttagtc atcctgttta cctctttctc agggagttta gtctccagga tttccggggc
      301 ggttcatgct ttcgtgcggt atacctctgg ataaaaacat cgcatcacat tacgccaagc
      361 atggatactg aataaatcta atcctggaat gagcacagac aaatgccagg cgggatttca
      421 ggagattcag tgaggtataa atgggaaaaa tgaaagaact gctgtttgaa attcaggaag
      481 aacgcactga tgaatggatt gcggaaaatt acacggatgc tgaggaagga actcctgaat
      541 gggatgcggc agcacaggaa tacagctggt ttcaggactg gatggaagag gcggctgagc
      601 agcaatattt tgaggcttcg cttgccagta ttcctgaccg tctgcaggat gcaaaagatg
      661 aattgtttga gttagagaac ctgatgcagt tcaaccaacc gggaattgtg gagcgaatgg
      721 cttacgttca ttgtgtgagt gtgttggaca gttttctgat gtacagcgca agggcacttc
      781 ttaatcatcc tccacatttg cagcgatttc tgcaggtagc tgattcgctg attgctaata
      841 aggaagacag aagaaaatta cgtgcttcca aatgggtcga gcaggaaccg gatacagcca
      901 ctcctgagaa ggtttatacc tggcgagctc agtctcttgt ggcgaagaaa acgtttcaga
      961 gccacaaagt gatagatcgg tatttttcaa cgatgctggc aacaccgcat gagtggcctt
     1021 tgtaggaact tgagagggta atcaaggtcc gaaacgcact ggtacaccgt gatggagtta
     1081 ccgaatctct tgaacccgtg tatatcagtt cggggagtgt gcagaatgct atctgcacgg
     1141 tacgagcatt tattaccgcg gcggctgaaa cccttctgca ggaagatgcg ctatacagga
     1201 cggatgatgg cacgttctga aattaccgca gcgacaccat ccataagcct cctcttcact
     1261 gagggatatg tcgatggttc atgatgaact gccaaaatac ctgctggtca ctctgaagca
     1321 gcggacagaa aaagcagcca ggacggcagg aagaacgcca gccgggcagt agactcaccg
     1381 gctggttccg ctctccgact cttggtacgt cagccagctg cagacgatgg tggccacact
     1441 gaaaatcccc atggaacggc gtaataaacg gacaggcagg agagagaaag cgcggatctg
     1501 ggaagtgacg gacagaacgg tcagggcctg gattggggaa gcggttaccg ctgacggtgt
     1561 gacgttatct gtcccggtca cgccacatac gttccgccat tcctatgcga tgcacatgct
     1621 gtatgtcggt ataccgctga aggtcctgca gagcctgatg gggcataagt ccatcagttc
     1681 aacggaggtc tacacgaagg tatttgcact ggatgtggct gcacggcacc gggtgcagtt
     1741 ttcgatgctt gagtccgatg cggtgtctat gctcaaaaga attccttaag ctctgacttt
     1801 tttaaatccc tttcggatat ctcatggata tattatcggt atttcatatt ctgttgacat
     1861 gccgggccgg tatagagtaa aaaaaacatc tattgagtac ctcttggata tccgaaaggt
     1921 gtctttgggg ggctttatgg gtattacatg tggattctgg agatacacta tgcctgttat
     1981 tgctaatacg catcccaaag gtggtgtggg taagacaact tcatccgtaa acattgttgg
     2041 tgaaatgaag tctgatacag ttgatctgga tactcatacc gggctttcta tcattctggg
     2101 gctgagacct gaaggaaaag aaatttccgt gaaagtaccc aaaacagtgg atgagttaat
     2161 cgaaattatg actccctaca agaacagcga taagacgtta cttattgact gtgggggatt
     2221 tgactcagat cttacccgta ctgcgattgc ctttgcagac tgcgttattg tcccttcaaa
     2281 agactccctg actgagcgta ttggtttgat gcattttgat ggagtactgg acgaaatcag
     2341 ctctatcatg gggactgata taactgctca cctgtatctc tgtaaagtta atcctaacaa
     2401 gaagaaattc cctaagcttg atgcaatcct gccatcgttc aaacatctga agctgatgaa
     2461 gagccgcatt tctgctcgtg cagaatttga ggatgtcatt gagactggga tgggaatcac
     2521 tgagtctgtt catgggcgct attcggcagg aggtaaggaa gttattgccc tgatcgaaga
     2581 aatcaatcat ctgattgaaa ataacaaaca gtaaagtgta tctattgggt atccatatag
     2641 tattctttgg gtttttaaag gatatctttt gagtatctaa caaacatcct gggttatctc
     2701 atgagcaaag cgaaatttag tgcacaggct gaaaaactga aaaacctggt ggattctgcc
     2761 agattacaaa cttcttcttc tgccgtaaca gcaacagtcc cgtctcagcc aaatgaaggt
     2821 acagaggaag tttcaggtcg tcccgtggcc gccaggacga aggctaagaa tcttaaggcc
     2881 ataccgctgt cgtattttga agctcatgcg gaacttaaag cgaccagtaa aacatctctg
     2941 gattttagct catatattat tgaggctata agagagaagc ttgaacgtga tggcgcaata
     3001 ggtcaataag ctatcggata ccttaagggt atctaatgtg tgtcttttaa atgcgttatg
     3061 gggattctta gtgtacctaa agagtcccca ttagacatct ttctgtatat ggtgacatga
     3121 ttcgtcaccg ctttcctttc ctctcagttt caccatttca ttcccttccc ttaacctgaa
     3181 ccatgatgtc aaagatattt ttatattgca tttatgtatc acatataaca ctcataatgt
     3241 tttttgtatc tatgattttc tctggtctta aggttgtacg tgcgatatac atgcagttta
     3301 ttgtgttttt atgttgcttg taccctttca gaaagaccat ctttccatta taattgaata
     3361 tacattgcat gtatgaagca tatttgtttt ttctatttgt ttatgagcaa cggagactgg
     3421 ttatgaaaat ctttattgat gatggttcta ccaacattaa acttgcctgg ttggaggatg
     3481 gtgacgtgaa aacgttaatc agccctaaca gctttaaacc ggaatggtct tttagtttac
     3541 tggatgatgc tgccccggct aattacgaga tcgacggcga gaagttttca tttgatccat
     3601 taagtgctga tgctgtcgta acgactgaaa cacgctatca gtacagtgat gtgaatgttg
     3661 tggccattca gcatgcgcta cagcagaccg gcctgaaagc gcagcctatt gatgtcatcg
     3721 tcacattgcc gatctctgaa taccttgacg ccaacaatca gaaaaataag caaaacattg
     3781 aaagaaagaa aaaaaatgtg atgcgtgaag tacgggtgca ggggagtgat gcatttgtta
     3841 ttcgcagtgt ttccgttctt cctgaaagta ttcccgctgg tttcagtgtt cttgcggggc
     3901 ttgaggatga tgaatccctt ttgatcgtag atctcggtgg tacaactctt gatgtgtcgc
     3961 atgttcgtag caaaatgaca gggattacaa aaacctggtg tgatccgaat atcggcgtgt
     4021 ccctgattac atccggggtt aaggaacaga tggctgtaca tgctaataca agagtgagct
     4081 cattccaggc tgacaatatc attgtgcacc gtaatgaacc tgactacctt tcccgtcgca
     4141 tttataatgc tgaacagcgt gagtctatca ttaatgttat caatgaacgg cagaagttgc
     4201 ttattaaacg agttaatgat gtcatcagcc gtttcaccga ctatacacat gtaatgtgtg
     4261 ttggtggtgg ggctgaaatt gtggccgagg ctgtgaagaa cctgactaag gttcctgatg
     4321 agcgctttta tctgagctca tccccgcagt ttgatttagt catgggaatg ataaaaatga
     4381 aaggtggtgt gactaatgag tgatgaaaat aaatccagac gctgctcatt tgaacttttc
     4441 ccggatgaac ggacaggaga taagatagca gatgagctca ttgcaaatga aaaactgaag
     4501 gagcggggac gtttcatgcg cgcgatgtta gttactggtg cggcgtttgc agctatagat
     4561 aaacgtcttc ctttgctgat atcggagtta ctgacagaaa atacgactct ggatgatatt
     4621 aataaggtga tttccagcgt aataccaggt gctttttcgg ttgaaaagaa attgcttgaa
     4681 ttactggaaa aacaatctgg tctccatacg tctgtggatt gcagtactcc tcttacagag
     4741 cagagtctgt cgagaaatga cggtgaagac cagaccagaa gaaacgctga aaatatgttc
     4801 ggagatgact gaactaaccc agcctggcca ggggaatatc tcgccattta gttgtataac
     4861 actgactcaa catttcccgt ttcatttgcc attcaggggc ggttcctcgc cccgcaaacc
     4921 acactttccc ttttcccgac tggttcagtt catcgagtgt tttcattaac ttttcgctgt
     4981 ttttatgggg ctggatttca tcaaataatc ccggctgcgc tatacccgat ggtgtgaaat
     5041 cagccagcat gactcctgcc ttcatatagc ggtacccttc acgccagaca tggtttaacg
     5101 ctctgcatgc tgcggcaata atgtcccggc tgtcctgtgt aggcaatgga agcttttcca
     5161 cagcggaatt gctgtaacag gggctttcac tgcaaagggt gacgttcgta taaatgtcgc
     5221 cacctgccgg caatactgac gctccccacg tagtttctct gcggcccgct ctgcatactg
     5281 aacaacagcc tggtgcatgg catctttgtc tgtgattcgt tcaccaaaac tgcggctaca
     5341 gacaatctgc tgttttgccg gtggggcttc ttccggagat atgcaggact cgccgttgag
     5401 ttcgcgtact gtatgctcaa gaatgacgct gaagtttttc cggatgaatg ccgtgttagc
     5461 ctgcgccagc tgctgcgctg tgttaatacc ctgcgcattc agcttttccg tcagtctgcg
     5521 tcctactccc cagacttcac caacaggctg ctgccccagt aacttgaagg tccgattacg
     5581 gttttctgcc gtcagcgcga ccacaccgga aaactgtggc cattgctttg ttgcccactg
     5641 tgcacttttg gccagcgttt ttgtaggtgc aatgcccacc cccatggcga gtcctgtcca
     5701 gctctttact tgttccctga gctgatgacc aaaaacctcc ggagagatgc aacggttcac
     5761 cccccgcaaa tcaatgaaca acgtgagtga caacaccaaa aatacagatg ttttccggat
     5821 acagtgtgcg gaactccggg ctgtctgaaa ccggctccag tgccgggcgt gggcgcaaca
     5881 gcagtcgttt gacggtgaac tccccgtcga tctcagcgat aacgatgtcc ccgtgttgtg
     5941 gtttttcggc cctgtccact accagcagat caccattctg cacgccagcc tggttcatcg
     6001 attcaccgct ggcgcgcaga aagaaggtgg ctgcaggtct gctgatgcaa tagctgttca
     6061 gatccagttc ctgctcagca taatcagtgg caggcgaagg aaaaccggcc tggcaacgat
     6121 cggcaaacaa cggtcgcacg taactgtcat tgcctgaagg gtcagccgga cggtgataaa
     6181 cggtactcat gctgcaggca gccagctgtc gtcctgccag atttcttcca gcagagacag
     6241 gatacgttct ttatccttgt cgttgcgggc tcctgtgaca gatacagacg gggcgctgcc
     6301 ctggtctata cgcagccaga tttccgggta gtgtggtttc agacgtcgtt cgatttcatt
     6361 ctgtagcgcc tgaagtgtgc ctgatttgag gttttttgtg ctctggcggt cgaaaagaat
     6421 ttcaatgcgg atcatgttct catctccctt ttcttttgct gtatgcatat acagtattct
     6481 aataactgaa tccacacaca gtcaaatgtc attattgtga ctaaaaaacg ctcaattctc
     6541 tgagggtgtg gctgtatgcc tgctgtggac ggctgtgtcc agcttatcca cagcattttg
     6601 tgcacggttc tgtggacaaa atacctggtt acccaggccg tgccggcacg ttaaccgggc
     6661 tgcatccgat gcaagtgtgt cgctgtcgcc ggcctcctca cccggtcacg tttcgtcgtt
     6721 cctcctccac gcgctgcggc ttcggggccg cacctgcatt cgtatgcggt cgcccggtta
     6781 caggtgcggc acggcctggt ggaggccgca tgtgagagga gaattcccat gccaaactgg
     6841 tgctcaaatg tgcgacatga agtcgcctga ataattgttc cagcggagtt cgattccgtc
     6901 agggaacctg atgttccgtc atcagtagcc tactgacaca tgcgtcactg gtaacggtgg
     6961 ggtgtgaagc tgtcaggaca atgaaaccgg atcttcggat cgcatgaaac cgtgaggtta
     7021 catgtaatct gccagcatca ggcggaggag gtctaggctc ggtagcatga ctaacatatg
     7081 tgaactgctg aagcgtcgtt aaccagaaca agccaaagat gctgacaggc ttgaaccaaa
     7141 aggtatgtgg ttggttactc ctctgtttgc taggggtaca cggacaataa accaccggtg
     7201 ttgtgagcag agtctaacct actgttgtta ttcaggtgga acatggtaag cccgtatcgc
     7261 tgcctcgtga ggcaggttaa ccgcaaggga tactgttggc ggtgcgggta aaagaaggtg
     7321 gaaaaagcga atgccagtct gtaatggacc ggataagggt tgagcccggc aacattaccc
     7381 tacgcgaaag cgggcagact tccactgggt ctttcattac gagagagttt gagtaatctt
     7441 ccagaaagga aaagcagatg actgagcagg ctacaacctg taaaggtgcg tccttactta
     7501 acggtgactc ctggcacagt atcaactggc gtcagtgcta tcgggaagtg cggagactgc
     7561 aagcgcgtat cgtaaaggca acacgagaag gtaaacatgg caaggtcaaa tccttgcaat
     7621 ggatactgac tcactcgttt agtggcagag cagttgctgt cagacgagtt acagagaata
     7681 gcgggaaacg tactcctggg gttgatggtc agacatggtc ttccccggag gttaaatttc
     7741 ttgctattaa cctgctgaaa cggcgtggtt acaaaccaca gccacttaag cgggtttata
     7801 tacctaagtc aaatgggaag tctcgtcccc ttgggatacc cactatgaag gatcgggcga
     7861 tgcaggcgtt gtatttgctg gctcttgagc ccgttgctga ag
//
LOCUS       DAPGWB010000191         7848 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.193, whole genome shotgun sequence.
ACCESSION   DAPGWB010000191 DAPGWB010000000
VERSION     DAPGWB010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7848
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.193"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            4..522
                     /locus_tag="RHX79_004123"
     CDS             4..522
                     /locus_tag="RHX79_004123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-tetronate isomerase"
                     /protein_id="HDV2199232.1"
                     /translation="MNINKDKIVQLADTDTIENLTSALSQRLIADQLRLTTAESCTGG
                     KLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAI
                     ERADADVSIAITGYGGPEGGEDGTPAGTVWFAWHIKGQNYTAVMHFAGDCETVLALAV
                     RFALAQLLQLLL"
     gene            complement(567..2612)
                     /gene="dcp"
                     /locus_tag="RHX79_004124"
     CDS             complement(567..2612)
                     /gene="dcp"
                     /locus_tag="RHX79_004124"
                     /EC_number="3.4.15.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-dipeptidase Dcp"
                     /protein_id="HDV2199233.1"
                     /translation="MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIA
                     AIALNPQTPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAEL
                     ANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKV
                     LNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWL
                     IPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDGNDTRAIIQRLVEIRAQQATLL
                     GFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQP
                     WDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYH
                     PDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNETHPVIYNVCNYQ
                     KPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHW
                     ATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEE
                     NEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADD
                     GYQWFVEQGGLTRENGLRFREAILSRGNSEDLERLYRQWRGKAPQIMPMLQHRGLNI"
     gene            2749..3495
                     /gene="ydfG"
                     /locus_tag="RHX79_004125"
     CDS             2749..3495
                     /gene="ydfG"
                     /locus_tag="RHX79_004125"
                     /EC_number="1.1.1.298"
                     /EC_number="1.1.1.381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional NADP-dependent 3-hydroxy acid
                     dehydrogenase/3-hydroxypropionate dehydrogenase YdfG"
                     /protein_id="HDV2199234.1"
                     /translation="MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL
                     GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM
                     IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN
                     LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW
                     VSTLPAHVNINTLEMMPVTQSYAGLNVHRQ"
     gene            3584..4270
                     /gene="ydfH"
                     /locus_tag="RHX79_004126"
     CDS             3584..4270
                     /gene="ydfH"
                     /locus_tag="RHX79_004126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator YdfH"
                     /protein_id="HDV2199235.1"
                     /translation="MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVR
                     FNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAA
                     SMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLK
                     ATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIR
                     QENSDWFSEE"
     gene            4448..4651
                     /gene="ydfZ"
                     /locus_tag="RHX79_004127"
     CDS             4448..4651
                     /gene="ydfZ"
                     /locus_tag="RHX79_004127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium delivery protein YdfZ"
                     /protein_id="HDV2199236.1"
                     /translation="MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRG
                     KTVVVEGCEEKLAPLDLIRLGMN"
     gene            complement(4687..6147)
                     /locus_tag="RHX79_004128"
     CDS             complement(4687..6147)
                     /locus_tag="RHX79_004128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HDV2199237.1"
                     /translation="MGNNLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADIL
                     ATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQM
                     DGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATG
                     VIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAQAVDEKLAQWIEDNVTFP
                     STMVDRIVPAVTEDTLAKIEQLTGVGDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAE
                     LVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAP
                     TLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKF
                     DLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIF
                     GDDLPDNSLFTAKVTEAYLSLLAHGAKATVAKYSVK"
     gene            complement(6236..7519)
                     /gene="ydfJ"
                     /locus_tag="RHX79_004129"
                     /pseudo
     CDS             complement(6236..7519)
                     /gene="ydfJ"
                     /locus_tag="RHX79_004129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000582800.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter YdfJ"
BASE COUNT         2061 a         2009 c         1816 g         1962 t
ORIGIN      
        1 acagtgaaca ttaataaaga taaaattgta caactcgcag ataccgacac tattgaaaac
       61 ctgacatccg cgttgagtca aagacttatc gcggatcaat tacgcttaac taccgccgaa
      121 tcatgcaccg gcggtaagtt ggctagcgcc ctgtgtgcag ctgaagatac acccaaattt
      181 tacggtgcag gctttgttac tttcaccgat caggcaaaga tgaaaatcct cagcgtaagc
      241 cagcaatctc ttgaacgata ttctgcggtg agtgagaaag tggcagcaga aatggcaacc
      301 ggtgccatag agcgtgcgga tgctgatgtc agtattgcca ttaccggcta cggcggaccg
      361 gagggcggtg aagatggtac gccagcgggt accgtctggt tcgcgtggca tattaaaggc
      421 cagaactaca ctgcggttat gcattttgct ggcgactgcg aaacggtatt agctttagcg
      481 gtgaggtttg ccctcgccca gctgctgcaa ttactgctat aaccaggctg gcctggcgat
      541 atctccaggc cagccattgg tggtgtttat atgttcaagc cacgatgttg cagcatcggc
      601 ataatctgag gagccttacc gcgccattgt cgatacaggc gttccagatc ttcgctatta
      661 cctctggaaa ggatcgcctc gcgaaaacgc agcccatttt cacgcgttaa tccgccctgc
      721 tcaacaaacc actgataacc atcatcggcc aacatttgcg tccacagata agcgtaataa
      781 cctgcagcat atccgccacc aaaaatatgg gcgaaataac tgctgcgata gcgtggcggt
      841 atagcaggaa gatccatatt ttccgccacc agcgcccgca attcaaaatc atcgacatcc
      901 tgcattgctt cgttttcttc caggcaatgc cagcgcatat cgagaagtgc ggcgctaagc
      961 agttcgctca tctcataccc tttgttgaac aggctggcat tacgcatttt ctgttgcagt
     1021 tcgtcaggca ttgctgcccc gctctgataa tgccgggcgt agcgagcgaa tacctgcgga
     1081 tgcgttgccc agtgttcgtt gatttgcgac ggaaattcga caaaatcacg cggcgtgttg
     1141 gtgccggaaa gcgtggcata acgctggcgg gcaaaaaggc cgtgcagcgt atgaccaaat
     1201 tcatggaata aggttattac atcatcccag agtaacaacg caggctcacc ggcagcgggt
     1261 ttctgataat tgcagacgtt ataaattacc ggatgcgttt cattaagcgt tgattgctca
     1321 acaaaattgc ccatccatgc accgccgctt tttgaatcac gggcgaagaa atcaccgtaa
     1381 aataacgcca gtcccacgcc attatgatca aaaatttccc acacacgaac gtcaggatgg
     1441 tagacaggaa tatcaaaacg ttcgacaaac ttaataccga agagctgatt cgcggtccag
     1501 aatactcctt cattcaacac cgtgtttaat tcaaaatatg gtttgagctg cgcctcatca
     1561 agatcaaatt tctcccgccg tacctgttcg gcataaaatg cccagtccca cggctgggcg
     1621 ctaaacccgc cttgctgctt atcgataacc gcctgtatgg aggctaattc atcgcttgca
     1681 cgttgacgcg ccgctggaac aatttcccgc ataaagttga gtgctgcttc aggtgttttt
     1741 gccatctgat cggcgatttt ccatgcggca taatgaggaa aaccaagtaa tgtcgcctgt
     1801 tgtgcacgga tctccaccag acgttgaatg atagcgcggg tatcattgcc atcatttttt
     1861 tccgctcgcg tccagcccgc aataaacagt ttttcacgcg tcgcacgatc gcgcatttcg
     1921 gcaagcgccg gttgttgggt ggtattcagc agcggaatca gccatttgtt atccagacct
     1981 ttctcgcgag ccgcctctgc cgccagcgca atctcttgct cactcattcc tgccagctgc
     2041 gcgatatcgt tcacaaccag accgccggat ttatttgctg ccagtaaccg ctggttaaac
     2101 tgactggtca gtgtcgcagc ttctgtattc agtactttta attttgcttt atcagcttgc
     2161 gcaagtttgg ctccggcaag gacaaaacgt tgatgaatca cctccaccag gcggatggat
     2221 tcactatcaa gccccaggga ttcacggcgc tgccagacag catctacccg cgcgaataat
     2281 tcaccgttca gatagatatc attagccagt tccgccagtt cagcggaaaa ctgttcatca
     2341 agacgctgta attcatcatt ggtatgcgcc gcagtcatcg caaaaaagac gctggtaacg
     2401 cgggtaagta attctccgct ttgttccagt gccagaatag tattgttgaa atcaggcgtt
     2461 tgcgggttaa gcgcgatggc agcaatttct gcccgctttt gctgcattcc ctcatcgaat
     2521 gccgggcgat agtgatgatt ggcaatttga tcaaaatgag gagccagata cggcagtgtg
     2581 ctttgcacaa ggaaaggatt cattgttgtc attttcttct cctgaacgcg aggtgttcca
     2641 tagcgtaggc ttactgataa cggagtgcaa tcttgcaaac cagtattacc cgctcttaag
     2701 catcacgtgc tatgttattg acacacaaaa gcgttgagga acagtgagat gatcgtttta
     2761 gtaactggag caacggcagg ttttggtgaa tgcattactc gtcgttttat tcaacaaggg
     2821 cataaagtta tcgccactgg ccgtcgccag gagcggttgc aggagttaaa agacgaactg
     2881 ggagataatc tgtatatcgc ccaactggac gttcgcaacc gcgccgctat tgaagagatg
     2941 ctggcatcgc tccctgccga gtggtgcaat attgatatcc tggtaaataa tgccggcctg
     3001 gcgttgggca tggagcctgc gcataaagcc agcgttgaag actgggaaac gatgattgat
     3061 accaacaaca aaggcctggt atatatgacg cgcgccgtct taccgggtat ggttgaacgt
     3121 aatcatggtc atattattaa cattggctca acggcaggta gctggcctta tgccggtggt
     3181 aacgtttacg gtgcgacgaa agcgtttgtt cgtcagttta gcctgaatct gcgtacggac
     3241 ctgcatggta cggcggtgcg cgtcaccgac atcgaaccgg gtctggtggg tggcaccgag
     3301 ttttccaatg tccgctttaa aggcgatgac ggtaaagcgg aaaaaaccta tcaaaatacc
     3361 gttgcattga cgccagaaga tgtcagcgaa gccgtctggt gggtgtcaac gctgcctgct
     3421 cacgtcaata tcaataccct ggaaatgatg ccggttaccc aaagctatgc cggactgaat
     3481 gtccaccgtc agtaattttt atacccggcg taactgccgg gttattgctt gtcacaaaaa
     3541 agtggtagac tcatgcagtt aactcactca caagcaagaa cgaatgaccg tcgaaacgca
     3601 acttaatccc acacagcctg tcaatcagca gatttatcgt attcttcgtc gcgacattgt
     3661 ccattgcctg attgcaccag gcacaccgtt gtcggaaaaa gaagtttctg ttcgtttcaa
     3721 tgtgtcacgc cagccggttc gtgaagcctt tattaaactg gcggaaaacg gcctgattca
     3781 aattcggccg cagcgtggca gctacgtcaa caaaatttcc atggcccagg tgcgaaacgg
     3841 cagttttatc cgtcaggcca ttgagtgcgc ggtggcgcgt cgggcggcga gcatgattac
     3901 cgaaagccag tgctaccaac tggaacaaaa tcttcaccag caacgcattg ccattgagcg
     3961 caagcaactg gatgattttt ttgaacttga tgacaacttc catcaactcc tgacgcagat
     4021 agccgactgt caactggcgt gggataccat tgagaacctg aaagcgaccg ttgatcgcgt
     4081 gcgctatatg agtttcgacc atgtttctcc accagaaatg ctgttacgcc agcatcttga
     4141 tattttctct gccctgcaaa aacgtgatgg cgatgcggta gaacgtgcaa tgacgcaaca
     4201 tttgcaggaa atcagcgaat ccgtgcgcca gatccgccag gaaaacagcg actggtttag
     4261 cgaagagtaa ttcatttact ctcatcccat ccgggatgag aggcttttcc ccccgcctta
     4321 cggctcatgc atgcatcaaa aaagatgtga gcttgatcaa aaacaaaaaa tatttcactc
     4381 gacaggagta tttatattgc gcccgttacg tgggcttcga ctgtaaatca gaaaggagaa
     4441 aacacctatg acgacctacg atcgtaaccg taacgcaatc accactggca gccgtgttat
     4501 ggttagcggc accggtcaca ctggcaagat cctgtcgatt gatactgaag gtctgaccgc
     4561 tgagcaaatc cgccgcggaa aaaccgtagt tgttgaaggt tgtgaagaga aactggcacc
     4621 tctggacctg attcgtctcg gcatgaacta agtgtgtgaa tgccgccgat ggcggcattg
     4681 ctttttttac ttcacggaat atttcgccac ggtcgctttc gcgccatgcg ctaataaaga
     4741 caagtacgct tccgtcactt ttgcagtaaa caagctattg tctggcaaat catcaccaaa
     4801 gattgcctta atcgccagca atgactggac gcgcgctttc ccttcggcac tactttgtac
     4861 agccttctga ataacaggta acagtgggtc actgatttct atcggatttc cctgttcatc
     4921 aacaccaccg acataacgca tccaacccgc gacgcccagc gccagcagat cgaacttgct
     4981 gtcatgcgcc agatgccagc gaacagaatc caacatccgc tgtggcaatt tctggctacc
     5041 atccatcgca atctgccagg ttcgatgacg taacgccggg ttgctatagc gtgcaattaa
     5101 tcggttagcg taatcttgca aatcaacgcc ctgcactttc agcgtcggcg cttgttcctg
     5161 caacatcaag ccatacgccg cataacgata atgttcatct tccatgcagt cattaatgtg
     5221 ctgatatcca gcaagataac ccaaatacgc caggaatgaa tgactgccgt tgagcatgcg
     5281 caacttcatc tcttcataag gcagcacatc actaaccagt tcggctcccg ctttttccca
     5341 ttctggacgt ccggcaacaa agttatcttc tattacccac tggcggaaag gttcacaggc
     5401 aacgcccgca ggatcgccca caccggtaag ttgttcgatt ttcgccagcg tatcctctgt
     5461 cactgcgggc acaatacggt ccaccattgt tgatgggaaa gtcacgttat cttcgatcca
     5521 ttgtgccagt ttttcatcaa cggcttgcgc gtaggaagtg acaacgtcac gcataacatg
     5581 accgttttct ggcatgttgt cacatgacat gacggtaaat gcgggaagtc ctgccgcttt
     5641 acggcgagcc agcgcctcaa caatcactcc tgttgctgtt ttcggctggt ggggattttg
     5701 cacgtcggca gcgaccatcg ggtgatcgag cattaactgt ccggtcgccg gagagtggaa
     5761 ataccctttt tcggtgattg tcagagagac aatcgcgatt tgcggttcac acatcgcagc
     5821 caacacggtt tctaagccat ccatctgtac gtgcaaggct tttttaacga cgccaacgac
     5881 gcgagccgtc cacgcatcgg ccgacatttc cgcaacggta taaagattat cttgctgttg
     5941 taaatcggca atttgctgtt cgccgccgat taagttgacc tcataatatc cccagtcact
     6001 gaaatgttcc gtagcaagaa tatcggcata cacgccctga tgcgcacggt gaaatgcacc
     6061 aaagcctaaa tgaacaattc ttggggccag gttattacga tcataaacag ggagtgtcgc
     6121 ttttgctgat aacaaattat ttcccataac aattccttaa atataaatat ggcaagctac
     6181 atgttttgtt atatgaataa aaatcccctc tccggtaaga gaagggattg aggatttaca
     6241 gacttctgga aggttgcgca gctcttacaa cacgcggttg atcttccgcg gcgtcttcca
     6301 gcgcacttaa atcacggtct ttcacttctg gcattttcag cgcagagatt aaaccaatca
     6361 ctgaatatgc catgatcata atggcgatcg gataccagga ttccgtcatg gtgcagaaaa
     6421 tacccgccag gataggacca aaaccggaag cgataagacc accaatttct ttagaaatag
     6481 ccatccgggt aaagcggttt ttacagccga acatttctgc catggtaatg ttttccagag
     6541 caaataatcc cagcaccgca cagttatgaa tcacaatcag tgcaaccata atggtgctcg
     6601 gggcatagct tttatctaca atgatagaaa gcattggcca tgccagcaca atcgcggagg
     6661 tattcataat aatatacggg atccggcgac caattttatc ggataaccaa ccaaggaacg
     6721 gaatggtcat aaagccgaga atcgaactaa tcatcaatgc atctgttgga attgctttgt
     6781 taaacaataa cgtctgcact aaatagcctg caaggaaagt ctgaattaac ccggagttac
     6841 ccgcctgacc aaaacgcagc cctgttgcca gccagaagga tttgctctgg aacatgctac
     6901 cagcaggtgc aggttttgct gtgggttggt tgctgtcatt aaccttctca aagaccgggc
     6961 tttctttcag attcatacgt aaccagatag caaagaccat cacgacaacg ctcgccagga
     7021 acggtatacg ccatccccac gccagcagtt cctctttact gagaatgaag aacataaagg
     7081 cccagattgc cgttgcgctc aaggttccgc agttagttcc catagctaca aatgaggaga
     7141 taattccgcg cttacctttt ggtgcatatt ccgccagcat cgtaccggca ccggaaattt
     7201 ccgcacctgc acccaacccc tgaataatac gcagcgtcac cagcaagatg ggggcaaaaa
     7261 caccaatctg tgcataggtc ggtaacacac caattaaggt ggtacagatc cccatcatgg
     7321 tgatggtaat aaagagcact tttttacgcc ctattctgtc gcccattttg ccgaaaataa
     7381 atgctccgac aatacgcgcc acataacctg caccgtaggt tcccattgcc aaaattaacg
     7441 ccattgccgt tgatgattca ggaaaaaata tttcatgaaa cactaacgct gcgccgagcg
     7501 aatataactg gaaatccata attcacaggt gttttttccc atcctgtggt ttccttggcg
     7561 ttttctaggt tttttcagat agttgcattt tttaaaaagc atcctaagtt cgatctcagt
     7621 gtctatctgg ggcctatttc tgtcccatat atgccccaaa aaaactcccc aacagataag
     7681 tagttttttc atggatttat gcgtaaaatc aagaacggct ggaaatcatt caatactcac
     7741 actatcgaaa aatttaccag ccaaccgcag cacgttcttg cataaggcgt gtctgcggtt
     7801 tttcaactat tcagatacat cactcccatc acattcattc ctccgcat
//
LOCUS       DAPGWB010000192         7838 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.194, whole genome shotgun sequence.
ACCESSION   DAPGWB010000192 DAPGWB010000000
VERSION     DAPGWB010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7838
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.194"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            53..1537
                     /locus_tag="RHX79_004130"
     CDS             53..1537
                     /locus_tag="RHX79_004130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001405821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3987 domain-containing protein"
                     /protein_id="HDV2199238.1"
                     /translation="MSFGQPCDEFPLSSLPPLIRDAVIEAQQITQAPLGLVAASALGA
                     VSLVCQNLIDVCRLNTLRGPVSLFFLTLAESGERKTAVDKLLMKPLYQQEMQLYSRYK
                     SELAVWKNKEELLKAQKKALLSKLNKELRKGADESETLRQLEVLQKNSAEEPVRYKFI
                     FNDATTAAIKNQLCGKWRSVGIMSDEAGIIFDGYTLSELPFINKMWDGSVLSVDRKNE
                     PEQMIENARMTLSLMVQPGLFDRYMERKGSVARDSGFLARCLISKPATTQGKRFINGA
                     VIPGGSLTAFHERLMELARGSIEKSSEDERYCLHFSPEAQKIFIEHYNVLEQDLSPSG
                     PLSPFRGHVSKKTENIARIAALFQYFSYGEGKISADIMTSAVVISSWYTDEYKKLFAL
                     PDESELQQKDAEELFDWLIEECRGECPPRVRKNYILQCGPGRFRNRKKLNALLNILES
                     QFRLSVVPEGKTMYVLLPQIASLKLSDVSGIFTSGYHYNKLRAK"
     gene            complement(1859..2461)
                     /locus_tag="RHX79_004131"
     CDS             complement(1859..2461)
                     /locus_tag="RHX79_004131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001590672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199239.1"
                     /translation="MKPQYQTRYELLHESYQKWLTGFTRHAVSWGVCHPNIYYFHNLT
                     PGWVSFNGEKPEIAIVPQSLHRLIYGPDKRTTPPLDDDLIVNLCTSEHLLVHHPMLEG
                     ILLSECERLRQRSLANKLISLFRQFGGTELRLKLVWLCWLDLMTGNCLDDWTENLKRK
                     SEKELEEWIINRQKQSAALTDLMDQYVLLAYRTTVDDKRT"
     gene            complement(2548..2754)
                     /locus_tag="RHX79_004132"
     CDS             complement(2548..2754)
                     /locus_tag="RHX79_004132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001564245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HDV2199240.1"
                     /translation="MITPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKDGDFPAPIKM
                     GRSSRWLKSEVEAWLQARIAQSRP"
     gene            3513..3662
                     /locus_tag="RHX79_004133"
     CDS             3513..3662
                     /locus_tag="RHX79_004133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000850858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin activation protein"
                     /protein_id="HDV2199241.1"
                     /translation="MEKVISHTRYKLTSAELEAFNSVVDHWLAELTMNKLYDRVPASV
                     WKYVI"
     gene            4477..5046
                     /locus_tag="RHX79_004134"
     CDS             4477..5046
                     /locus_tag="RHX79_004134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020238748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inovirus Gp2 family protein"
                     /protein_id="HDV2199242.1"
                     /translation="MTYKYNPFWQRRIRETVRHALDVHPRLTALRVDLRLPDVPAATD
                     AAVISRFINALKARIDAYQKRKRREGKRVHPTTLHYAWAREFGVLRGKKHYHLLLLVN
                     RDTWCRAGDYRDPGSLAGMIKQAWCSALGVDAGPYATLAHFPDTPAVWLERGDDTGFQ
                     QVLERAGYLAKEHTKARGTGERNFGCSRG"
     gene            5213..5614
                     /locus_tag="RHX79_004135"
     CDS             5213..5614
                     /locus_tag="RHX79_004135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004020115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199243.1"
                     /translation="MYAKSFLALDGNGRLTGARTAQTAPYDRYTCHLCGSALRYHPQY
                     DTERPWFEHTDDGLTKHGHECPYVRPERREVRLIKRLQQFVPDALPVVRKASWHCRQC
                     HHDYYGEQYCTNCQTGGFSIPRTTQEEICEF"
     gene            5602..6036
                     /locus_tag="RHX79_004136"
     CDS             5602..6036
                     /locus_tag="RHX79_004136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001556209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HDV2199244.1"
                     /translation="MRILNCYMANDSKGHFVTAKEAAKHNRQDILCCVSCGCPLTLKR
                     GNHGQPPWFEHDQMTVAAKILLRCTWLDPAEKEARRLHLQGMTVPDYTVKVRKWFCVM
                     CDEDYEGEKCCPRCGTGVYSRAWGRQEVPSEDARADNPLQRL"
     gene            6811..7037
                     /locus_tag="RHX79_004137"
                     /pseudo
     CDS             6811..7037
                     /locus_tag="RHX79_004137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229544.1"
                     /note="with IlvB catalyzes the formation of 2-acetolactate
                     from pyruvate, the small subunit is required for full
                     activity and valine sensitivity; E.coli produces 3
                     isoenzymes of acetolactate synthase which differ in
                     specificity to substrates, valine sensitivity and affinity
                     for cofactors; also known as acetolactate synthase small
                     subunit; frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
     gene            complement(7039..7821)
                     /locus_tag="RHX79_004138"
     CDS             complement(7039..7821)
                     /locus_tag="RHX79_004138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
                     /protein_id="HDV2199245.1"
                     /translation="METKQKERIRRLIEILKKTDRIHLKDAARMLEVSVMTIRRDLHQ
                     EDEPLPLTLLGGYIVMVHKPAPSMPVIQDVPRNHRDDLPIAILAAGMVNENDLIFFDN
                     GQEIPLVISMIPDAITFTGICYSHRVFVALNEKPNVTAILCGGTYRARSDAFYDASNS
                     SPLDSLNPRKIFISASGVHDHFGVSWFNPEDLATKRKAMARGLRKILLARHALFDEVA
                     SASLAPLSAFDVLISERPLPADYVTHCRNASVKIITPDSEDE"
BASE COUNT         2003 a         1796 c         2081 g         1958 t
ORIGIN      
        1 tattaatagc cagaattgca gtgcttttat atctgtgtat agtgaggtta ctatgtcatt
       61 cggtcagcct tgtgatgagt ttcccctgag ttcgctgcct ccactcattc gtgatgccgt
      121 tattgaagct cagcaaatta cgcaggctcc ccttgggctt gtggcagcgt ctgccctggg
      181 cgctgtttca cttgtctgcc agaatctgat tgatgtctgc agactgaata cactgcgggg
      241 gccggtctct ctttttttcc tgacgcttgc cgagtccgga gaacgaaaaa ccgcagtgga
      301 caaattatta atgaagcccc tgtaccagca ggagatgcag ttatattcca gatacaaaag
      361 tgaactggct gtctggaaaa acaaggaaga gcttttaaag gctcagaaaa aagcattgtt
      421 gtcaaaactg aataaagaac tccgcaaagg cgcggatgag tcagaaaccc tcagacaact
      481 ggaagtactt cagaaaaaca gtgcggaaga acctgtgagg tataaattca tttttaatga
      541 tgccacgact gcggcaatta agaatcagct ttgtggtaaa tggcgttcag ttggtattat
      601 gtcagatgaa gccggtatta tatttgatgg atataccctg tctgagttgc cttttattaa
      661 caaaatgtgg gatggctctg tattgtctgt ggacagaaag aatgaacccg aacagatgat
      721 tgaaaatgcc agaatgacgt tatccctcat ggtgcaaccc ggtctttttg accgatatat
      781 ggagcgaaaa ggttctgttg ccagggacag tggttttctt gcccgttgtc ttatcagtaa
      841 acctgcaacc acgcagggga aacgctttat taacggagct gtgattccgg gaggatcatt
      901 aacggcattt catgaacgat taatggaact ggccagaggc agtattgaaa aatccagtga
      961 ggatgaacgg tattgtctgc atttttcgcc tgaagcgcaa aaaatattta ttgagcacta
     1021 taatgttctg gagcaggatt tatccccttc cggaccctta agcccgtttc ggggacatgt
     1081 ttcaaaaaaa acagaaaaca ttgcaagaat tgcagcgtta tttcagtatt tcagctatgg
     1141 tgaagggaaa atctctgccg atatcatgac gtctgctgtc gtaataagtt cgtggtacac
     1201 agatgaatat aaaaaattat ttgcgttacc tgatgaatct gaactgcagc agaaggacgc
     1261 cgaggagctg ttcgactggc tcattgagga gtgccgcgga gaatgcccgc cccgtgtcag
     1321 gaaaaattat attctccagt gtggcccggg ccggttcaga aacaggaaaa aactgaacgc
     1381 attgctgaac attcttgaat ctcagttcag gctttctgtc gtgccggaag gaaaaaccat
     1441 gtatgttctg cttccccaga tagccagttt aaagttgtct gatgtctctg gtatttttac
     1501 ctcgggttat cactacaata agctgagagc gaagtaaccg gtgagcagtt tttctccatt
     1561 atgcttcaga cttagatgat tgattattat ggggatttca tcaccgatat tcagatgtat
     1621 gaatatcggt gatgaactaa agctcaggag ctgcgtggtg gtgatgaatc aacaggcata
     1681 taactgatac ccgccggtca gaagttccag cctgcgactt tcctgtctgc gtgcccgcag
     1741 tccggcgttc aggtgcagcg tgtgacagaa cgcacggaga gcgaaacggc aggcagacag
     1801 gccgttcagt cagccctggc accctgcccg gataccagct tccctgaaac aactggcatc
     1861 aggtgcgctt atcgtcaacc gttgtgcggt atgccaggag cacgtactga tccatcagat
     1921 ccgtcagtgc tgcgctctgc ttctgacggt tgatgatcca ttcctccagc tctttttctg
     1981 atttccgttt cagattctcc gtccagtcgt caaggcagtt tccggtcatt aaatcaagcc
     2041 agcaaagcca gaccagtttg aggcgcaact ccgtgccacc aaactgacgg aagaggctga
     2101 tcagtttatt tgccagcgaa cgctgcctca gacgttcaca ttcagacagg agaatgcctt
     2161 ccagcatcgg atgatgaacc agcagatgtt cactggtgca taaattcact atcagatcat
     2221 catccagggg cggcgtggtc cgtttgtccg gaccataaat cagccggtgc agactctggg
     2281 gtacgatggc aatctccggt ttttcaccat tgaatgacac ccacccgggc gtcagattat
     2341 ggaagtagta gatattcgga tgacacacgc cccaggatac ggcgtgccgg gtgaagccgg
     2401 tcagccattt ctggtagctt tcgtggagca gctcgtaacg ggtctgatac tgtggtttca
     2461 ttttcatatt cctcacgggg gataacaggc agcagaacgc cgccggcagg ccggagactg
     2521 cgtctgctgc agatgaacgg ttaagaatta cggacgggac tgtgcaatac gcgcctgcag
     2581 ccaggcttcc acttcgcttt tcagccatcg ggagctgcgg cccattttga tgggcgcagg
     2641 aaagtcacca tccttgatga gtttgtaaaa ccacttatcg gtcaggccgg tcagttgagt
     2701 gataaatgcc atgtcgacca tctggtcatc catcagtgaa actggggtga tcatgagaat
     2761 gttcctccgg atgttgttaa accagccggt gtggtcatga aaacaacgca ccaccttcac
     2821 cggcataaca accggggaga aacgtaaaaa ataatcggga atgtgaccgc caggagataa
     2881 acggggaggt tacggtggct gagccgtacc ggtatgccgg gtggttgtta cgaaacgatg
     2941 cttccgcacg cgtgcgcgat aaagaaggga tgattttcgt gaggaagagg ggaaaactgg
     3001 cgttctgata attgcagagt tatttacggg gcggttacga tggggcagac cgtgtccggt
     3061 gggcaggcga caggtatcac cgatgggata agactgtctg attggtatta taaatatata
     3121 agagagctca aacacatgag atcaaataca tgagttcata tatgtgaaat aaacacggtg
     3181 agtgtgatca gtgggcatga tgagaacgca gtagcaacag actgcgctat ccctgatagc
     3241 tggcgtataa cccgcgtata taaaacgtat ctgcaatgta cgtgaacaga gtgcattaag
     3301 catccgtctg agcggtaaac atatccgacc tggtgagtga cagtctgaga gaccggttaa
     3361 gtggtggctc gggagtaatg agtttggggt gggtaccaga atgccagtct ggcggtatgc
     3421 tgacagtatc acgttaattg cagcataaag tgatgagagg ctaatggaag ttaaaaccaa
     3481 agcagttccg tcgttgttca tcccgggaga cgctggaaaa agtgatttcc cacacgcgtt
     3541 ataaacttac ctctgcggaa ctggaagcct tcaactctgt ggttgatcac tggctggcag
     3601 aactgacaat gaacaagctt tacgatcgtg ttcccgcttc agtctggaaa tatgtcatct
     3661 gagcgttcgg taatcacaac tgcatcgcgc caggtgttat ccgctttgtg attcttattg
     3721 gctcttctca ggttattaaa agctgaatat gttcctgttg tcgggaacca ggataatacc
     3781 gggaacgtta agcggtatag cgacaacaaa gaattcgaaa tcaaaaggga atggtgccgg
     3841 aggcgtgggc ggtaatgggc tgattttcag gtattaccgg cttacagcgt gtggttgata
     3901 ttgaggggct gtgagtttca cgtatttgtc agaaacccag acgagttttc ctgtatggga
     3961 cgaaataagg cagcggcaat acatggaaaa atttaatatg gtatgaagga gaacctgtcg
     4021 gttacgctta atataaccgg tacactgtca gctcagggga tacatgaacc gttatctcac
     4081 cagctacaca gtatatacac actgacgctg acagtagtca gcaggaccac aataatcagt
     4141 gccagcagta tggtaacgat acggtctgta ttccggtaat agccgaaggg gtcgacagaa
     4201 ccacaatacg ggcaacacac agtattatga gtaatcgcgt ttccacagtc ccagcacttc
     4261 tttttgcgta tcaccataac tccctcctca cagccttacc cgtaaccggt tttttacatt
     4321 aaaaaaacaa cgctgaaaat tcaaccgtca gtccggagac gaccgttcgg gttatctcag
     4381 agtgcctgag atattgcctg gttggagatc acttcaggga ctctgcgcat tttttacgac
     4441 gtggctattc cgtatgaacc atacggagat ttaaccatga cctacaaata caaccccttc
     4501 tggcagcgac gtattcgtga gacggtgcgg cacgcgctgg atgttcatcc ccgcctgacg
     4561 gcacttcggg ttgatctgcg tctcccggat gtaccggcag ctacggacgc ggctgtgata
     4621 tcccgcttca tcaatgccct gaaagcccga atcgacgctt accagaagcg taagcgtcgt
     4681 gaaggtaaac gcgtgcatcc caccaccctg cattacgcct gggcccggga gttcggggta
     4741 ctcaggggca aaaaacacta tcacctcctg ctgctggtca accgggatac ctggtgtcgt
     4801 gccggcgatt accgcgatcc ggggtcactg gccgggatga ttaaacaggc ctggtgcagt
     4861 gccctggggg tggatgccgg gccttatgcc acgttggcgc attttcctga cacgccggcg
     4921 gtgtggctgg aacgcggtga tgacactggc tttcagcagg tgctggaacg tgctggctat
     4981 ctggcgaagg agcataccaa agctcgcggc accggtgagc gcaactttgg ctgcagtcgt
     5041 ggctgagccc gacagacgac ttatctgacc ttagtgtgat gacgcgttca cagcgaccac
     5101 actgattttc ccttctgaga ctgaactgaa aaccgctatt cacacctgac cacgctgccc
     5161 gtaccgggac ggctgttgcc tgcgtgtcgt ctggcggctg aggaatatga cgatgtacgc
     5221 aaaatccttt ctcgcacttg atggcaacgg gcgtctgact ggtgcccgta ccgcacagac
     5281 tgcaccttac gatcgctaca cttgccacct ttgcggcagt gcactcagat accacccgca
     5341 atacgacact gaacgtccct ggtttgaaca cactgacgac gggctgacta agcacggtca
     5401 tgagtgccct tatgtcagac cggaacgcag ggaggtacgc ttgattaagc gtctgcagca
     5461 attcgtaccg gatgccttac ccgtggtgcg taaagccagc tggcactgca gacaatgtca
     5521 ccacgattat tatggggagc agtactgcac aaactgccag accggaggat tcagtattcc
     5581 ccggacaact caggaggaaa tatgcgaatt ctgaactgtt atatggcgaa tgacagcaaa
     5641 ggccattttg ttacggcgaa agaagctgcg aagcacaacc gacaggacat tttgtgctgt
     5701 gtgtcctgtg gatgcccttt aacacttaag cggggcaatc acggacaacc accgtggttt
     5761 gaacatgacc agatgactgt tgctgcgaaa atcctgctgc gatgcacctg gcttgacccg
     5821 gcagagaaag aggcccgtcg tttgcatctg cagggtatga cggttccgga ttatacggtg
     5881 aaggtgagaa agtggttttg tgtgatgtgt gacgaagatt atgaaggaga aaagtgctgc
     5941 ccgcgttgtg gtaccggggt atacagcagg gcgtgggggc ggcaggaggt gccgtcggaa
     6001 gatgccaggg ctgataatcc gttacagagg ctgtaatggt tgcctccggc gcagtttgcg
     6061 gtgatgccgt tcccgggaat ggattgccag tgcggggact gtggagctta attccggtat
     6121 tggtggcctt tccgttgatt ttgagccaac agccctcctg tgactgacag gctgcctcgt
     6181 cattccattc gtatctccag taacaggggg ttgtattgta ttttaatgtg ccggttcagg
     6241 cgtgcgtttc ccggcgcgtc tgcaccggct taaccaaatt caacagggat aaaatagtgt
     6301 aaataaccga agtattactt gcagaatcgg gggaagcatc cggggtttta ttcaacaggc
     6361 atgggaggct ccggctctga cagacattgt actgtggaat gttgttacag gttggggcgg
     6421 caaccgtgcc aggagaccat gagccgttca cggcattaaa ggccacactt cagtcgttta
     6481 cattccctgt ggtggcaggc atcttccgtt aaggcgtcag agcgttacca acgttatgtt
     6541 gtcatggctc acctttcata gtcgatgctt atctggtgac tgaaactagc cgcagataaa
     6601 gagtgtgaag ttgataccat ggagtggagt gacgtgcagg caggagattc gctctatgca
     6661 gggttgtgag atgaattcaa accggctgtc agcgccagta atatttgaag attcgtccgg
     6721 ttgttatcca gtgtgcatta aaaacccaga cattatggac aatacaacgg cttccataac
     6781 agggaggagc ctgtttatta tccgggcgta atgactaacc tttgtgggct ttttcccgtc
     6841 gtgcttttaa cgttgaaggc attttctgcc tgccgattca ggacagcgac aaaagccata
     6901 tcagactatt ggtcaatgat gaccagcgtc tggagtagat gataagccaa attgataaac
     6961 tggaatatgt gatgaaagtg caacgtaatc agtccaatcc gacgatgttt aacaagagta
     7021 cggtgttttt tcagtaagtc attcgtcttc tgaatcaggt gtaatgatct ttacagaagc
     7081 attccggcag tgcgtaacat aatctgccgg taacggacgc tcgctaatca gaacatcaaa
     7141 tgcagagagc ggtgcgaggc tggcagaggc tacttcatcg aacaaggcgt ggcgggcgag
     7201 caaaattttc cttagtccac gggccatcgc tttacgctta gtggcaagat cttcgggatt
     7261 aaaccagctg acgccaaagt gatcatgtac accgctggcg gaaataaata tttttcgcgg
     7321 attgagagag tctaatggcg aagagttact ggcatcgtaa aaagcatcac ttctggcacg
     7381 atacgtacca ccacaaagta ttgctgtcac attaggtttt tcattcaacg caacaaagac
     7441 acgatgtgag taacagatgc cagtgaaggt gattgcatcc gggatcatgc ttataacgag
     7501 cggtatctcc tggccattat caaagaagat cagatcattt tcattaacca ttccggcggc
     7561 cagaattgca ataggtaagt catcacgatg atttctcgga acgtcctgga ttactggcat
     7621 ggatggtgcg ggtttatgca ccattacaat atagccaccc agtagggtca gtggcagagg
     7681 ttcatcttcc tgatggagat cgcgacgaat agtcattaca gaaacttcca gcattcgtgc
     7741 cgcgtctttc aaatggattc tgtcggtttt cttaagtatt tcaatcaaac gtcggatacg
     7801 ctctttttgc ttcgtttcca tcaactctct ccgtaaaa
//
LOCUS       DAPGWB010000193         7742 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.195, whole genome shotgun sequence.
ACCESSION   DAPGWB010000193 DAPGWB010000000
VERSION     DAPGWB010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7742
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.195"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            27..755
                     /gene="gadW"
                     /locus_tag="RHX79_004139"
     CDS             27..755
                     /gene="gadW"
                     /locus_tag="RHX79_004139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadW"
                     /protein_id="HDV2199246.1"
                     /translation="MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFC
                     SPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESG
                     VNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAE
                     RMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYF
                     INTFRQYYGVTPHQFAQHSPGTFS"
     gene            complement(1118..4231)
                     /locus_tag="RHX79_004140"
     CDS             complement(1118..4231)
                     /locus_tag="RHX79_004140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HDV2199247.1"
                     /translation="MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTIT
                     VSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDI
                     AQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVAS
                     NIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQ
                     LGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYS
                     TVARYNGKPAAGIAIKLATGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIE
                     ISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLS
                     AVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPN
                     ALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEED
                     QGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGL
                     AFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMEL
                     LDNGNLGHEKLTQARNELLSLAAQSPDQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVA
                     LSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAP
                     LSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYS
                     WTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLAT
                     DLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIEAIIEAARMRLRP
                     ILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHL
                     FARFKKA"
     gene            complement(4256..5413)
                     /gene="mdtE"
                     /locus_tag="RHX79_004141"
     CDS             complement(4256..5413)
                     /gene="mdtE"
                     /locus_tag="RHX79_004141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtE"
                     /protein_id="HDV2199248.1"
                     /translation="MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPG
                     SVNVLSELPGRTVPYEVAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELN
                     SAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAV
                     EQATINLQYANVTSPITGVSGKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQD
                     FLRMKEEVASGQIKQVQGSTPVQLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIF
                     PNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNAQGKATALILDKDDVVQLREIE
                     ASKAIGDQWVVTSGLQAGDRVIVSGLQRIRPGIKARAISSSQENASTESKQ"
     gene            5473..5751
                     /locus_tag="RHX79_004142"
     CDS             5473..5751
                     /locus_tag="RHX79_004142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199249.1"
                     /translation="MRDLQTSGIVGLSASKVGYRYSDRHGEVNDKKNVAVLPTVPASI
                     RATKGSTGGYTYQGNKVVLASPLVITGGNEISICIPRHASHQFQLLMS"
     gene            complement(5752..6279)
                     /gene="gadE"
                     /locus_tag="RHX79_004143"
     CDS             complement(5752..6279)
                     /gene="gadE"
                     /locus_tag="RHX79_004143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadE"
                     /protein_id="HDV2199250.1"
                     /translation="MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVI
                     IDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEIT
                     YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKL
                     RRMSDIVTLGITSYF"
     gene            complement(7078..7650)
                     /gene="hdeD"
                     /locus_tag="RHX79_004144"
     CDS             complement(7078..7650)
                     /gene="hdeD"
                     /locus_tag="RHX79_004144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-resistance protein HdeD"
                     /protein_id="HDV2199251.1"
                     /translation="MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFV
                     SGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPEL
                     GIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVS
                     VTLVSTLVGIELIFSAASLFSFASLFVKQQ"
BASE COUNT         2049 a         1862 c         1826 g         2005 t
ORIGIN      
        1 cgcagtatga aatataaggg ataatcatga ctcatgtctg ctcggtgatc ctcattcgtc
       61 gttcattcga tatttatcat gaacagcata aaatatcgct gcataacgag agtatcgtgc
      121 tgctggagaa aaatttggca gacgattttg cgttttgttc accggatacg cgacgactgg
      181 atatcgatga gctgacagtt tgccattact tacaaaatat tcgtcagcta ccacgcaatt
      241 tagggttaca tagcaaagac cgtctattaa ttaaccagtc accccccatg ccgctggtga
      301 cggcgatttt tgatagcttc aatgaatccg gggtaaattc accgatactg agcaatatgc
      361 tctacctttc ctgtttatcg atgttttctc ataagaaaga actgatcccc ttacttttca
      421 atagcatcag cactgtttca ggaaaagttg aacgccttat tagctttgat atcgccaaac
      481 gttggtatct gcgcgatatc gcggaaagaa tgtataccag cgagagtctc atcaaaaaaa
      541 agttgcagga tgaaaatacc tgtttcagta aaatattact cgcttccagg atgtcgatgg
      601 ccagacgatt actcgagtta cgtcaaattc ctctgcatac tattgcagaa aaatgtggct
      661 atagcagtac gtcgtacttt ataaacacat ttcgacaata ttatggtgta acgccacatc
      721 agtttgcgca acattcgcca ggtacctttt cctgacatat tttgcatttg aatattggtc
      781 aggatctcac acctgcttca tgtgaaactc ttccctgatg atttctgccg ggctaccggc
      841 tagttctctt tcgcagtttg ccaggcggta taggtatttt caggaggaaa agactcggca
      901 tgtttgggat tattaagctg acaattcata cgattacggg aatgtgggtc agtattgtgc
      961 tgttcaaatt gatgacgaat ggctggagtg gtttctactt tcagtgctgt gtactaagcc
     1021 tggtattcct gacggttagc tggttgttga gtggtgaatg gttagcagga aagagtaagg
     1081 ctgaaccttc acgttcaacc ttactctcat ttacacgtta cgctttttta aagcgggcaa
     1141 agagatgttc cactacaacg aaaaagaccg gaacgaagta aattgccagc actgttgcgg
     1201 caaacatccc gcccatcacg ccggtaccta ccgcgttttg cgcgccagaa ccggcaccat
     1261 gactgataac cagcggcagc acgccgagaa taaaggccag agaggtcatc aggattgggc
     1321 gtaaacgcat ccgcgccgct tcgatgattg cctctatcgg cgttttccct tctttctgca
     1381 tcatctcaac ggcaaattcg acaatcagga tggcgttctt ggcggaaagc ccgatggtgg
     1441 tcagcaaacc aacctggaag tagacgtcat tacttaagcc gcgcagatcg gtggccagta
     1501 atgcgccaac gacgcctaac ggaacaacca acatcaccga gaacggaatt gaccagctct
     1561 catagagtgc ggcgagggcg aggaacacca cgaccagtga aatggcatac agtgcaggag
     1621 cctggtttga ggataacgct tcctgatacg acagtccggt ccatgagtag ccgacgcctg
     1681 ccggaagttt agcgaccagg tctgccataa atttcatagc gtcaccggta cttttcccgg
     1741 ccgccgcttc acctaaaatc tccattgacg ggatgccgtt gtagcgttcc aatcgcggtg
     1801 aaccataggt ccattcggta gacgagtagg cagaaagcgg tgccatcgtg ccagaggcgt
     1861 tgcgtacata ccattggttg atgttatccg gcaacatacg gaacggcgtg cctgcctgga
     1921 catacacttt tttcacccgc ccctggttga ggaagtcgtt cacgtagctg ctgccgaagg
     1981 cggtggaaat tgtctggttg atatcagaca gcgccacacc cattgcctca gctttcgcgg
     2041 cgttgacgtt cactttgaac atcggcgtat cttccaggcc gttcgggcgt accccggtga
     2101 cctggtcagg cgattgcgct gccagtgata acagctcgtt tcgtgcctgg gttagttttt
     2161 cgtgccccag gttaccgttg tccagcagtt ccatatcaaa acctgacgcg gtacccagtt
     2221 cagccaccgc gggtaagttg aacgggaaga cgacggcttt attgatactg cttaacgcaa
     2281 tcattgcccg ctgaatgatc gcggtaaccg agttttcctc accgacacgt tcagaccacg
     2341 gcttgagact gataaacgcc aggccgttgt tttgcccctg gccgctgaag ccaaagccgc
     2401 caacggtaaa caccgactga acattatctt tctcttttgt aagataataa tccgtcacct
     2461 gttgcagcac tttcgtggtg ttaaccatgg tggcaccgga aggtaactgc gcggtggtca
     2521 taaatacccc ctgatcctct tctggtaaga aagaggtcgg tgtacgcagg aacagcaccg
     2581 ccatcccggc gcaaatcagc aggtagacca ccatgtagcg accggtacaa cgcaacagcg
     2641 agcgggtgct atcggtatag tgctgagttg atttttcaaa cagcgtgttg aagcgtgcga
     2701 acagggcgtt aggtttgtga ccgccttccg gcgcggcttt cagaatggtg gcgcacaggg
     2761 caggggtcag gctcattgcc acaaatactg aaagcagcat ggaggagatc agcgtgatgg
     2821 agaactggcg gtagatctcc ccggttgcgc cgctcataaa ggccatcggc ataaacactg
     2881 cggaaagaac aacagcaata ccgaccagcg cacgttggat ctgccccatc gatttatgcg
     2941 tcgcttcctt cggtggtagc ttatcttccg caatgacacg ctcgacgttc tccaccacca
     3001 cgatggcgtc atccaccagt aaccctatcg ccagcaccat cccgaacata gttaacgtgt
     3061 tgatggtgaa accgaccgcc gacaagatcg caaacgtccc gagaataacc accggtacgg
     3121 caatcgtcgg gatgattgtg gcacggaaat tctgcaaaaa cagatacatg accaggaaga
     3181 cgaggatgat agcctcaacc agtgttttaa aaacttcctg aatagaaatt tcgataaacg
     3241 gcgtggtgtc gtaaggataa accgtcttca gacttgcggg gaaataggct gataagcggt
     3301 tcagctcctc tttgactgcc cgcgaggtat ccagggcgtt tgctccggta gccagtttga
     3361 tggcgatccc ggcagcaggt ttgccgttat agcgcgccac ggtggaataa tcttccgctc
     3421 caagttcgac gcgggcgaca tcacgcagca gcacttgcga accatcttgc tgaactttca
     3481 acaggatttt gccaaattct tccggcgttt gcagacgcgt ctgcacaatg atcgaggcgt
     3541 ttagttgctg gtctgccgcc tgtggcatgc cacccagttg accaccggaa atctggttgt
     3601 tttgcacctt aatctgggaa ataacatcgg aaggtaccag attgtattta ttgagttttt
     3661 gcgggtccag ccagatacgc atggcgtact cggaaccaaa gagctgtacg ctaccaacgc
     3721 ccgcggtacg gcttagcggg tctttgatat tagacgctac atagtccgcg atatcgtact
     3781 ggttgaggct gccgttatca gaaataaacg ccgctaccat cagaatatta ctgctcgact
     3841 tatcaacgct aatcccctgc tgctgcaccg cttcaggtaa tgaaggcata gcgagttgca
     3901 gtttattttg cacctgaacc tgtgcgatat caggagatgt cccagtctcg aaggtcagag
     3961 tgatagaggc attacccgcc gcatcactgg ttgaagacat gtacatcagg ccatcaagcc
     4021 cattcatatt ttgctcaatc acctgagtga ccgagtcttc taccgtttgc gcatcggcac
     4081 ctggataggt agcgctgacg gtaatggtcg gtggcgcaat ctgcggatac tgcgcaaccg
     4141 gtaagttcat gatcgccaga ccacctgcaa gcatcataat aatggcaagt acccaggcaa
     4201 aaaccgggcg atcaataaaa tagttagcca tgaaagtccc cttaagcctg caacgttatt
     4261 gtttcgattc ggtgctggcg ttttcctggc tggaggaaat tgctcgtgct ttgatacccg
     4321 gacgaatgcg ttgcaaaccg gaaacgatca cccgatcgcc agcctgcaag ccagaggtga
     4381 caacccactg gtcgccgatg gctttgctgg cttcaatttc gcgtagctgc acaacatcgt
     4441 ctttatccag aatgagcgcc gttgctttac cctgggcgtt gtgggtgacg ccttcctgcg
     4501 gcaccagtaa tacattctgg cggctacctt catccactaa tgccgtgacg tacatgccag
     4561 gcagcaagtc accatttggg ttggggaaaa tcgcccgtaa cgtcacggag cccgtggttt
     4621 catccaccgt cgggtcggag aatttcagcg tgccggtctg gctgtagcgt ttaccatttt
     4681 ccagattgag ctgtactggc gtactgccct gaacctgttt gatttgccca ctggcgacct
     4741 cttctttcat gcgtaagaaa tcctgcaccg actgcgtgag atcgacataa atcgggtcca
     4801 gacgttgtac ggtaaccagc gaatctgcct gattagcggt aacgagtgcg ccgacggtca
     4861 ccgacgattt cccgctgacg cccgtaatcg gcgaggtgac attcgcgtat tgcagattga
     4921 tcgtcgcctg ttcaacagcc gctttggcga cggtgacatt ggcttctgct tcattcaact
     4981 gggtgcgcgc ggtgtcgtaa tcctgacggc taacgtagtt ggtcttcagc aacgatgcct
     5041 ggcggttaaa ggtgatgcgg gcattgctgg cggtagagag cgctttcgcc agcgagcctt
     5101 tggcggagtt tagctcggcc tgtaaaggtg caggatcaat ctgatacagc gaatcgccct
     5161 ggttcacttt atcgccttcg ataaagttgc gtttaatgat aataccgccc acctggggac
     5221 gtatctcggc aacttcataa ggaacggttc taccgggcaa ttcgctcaac acattgaccg
     5281 aaccggggga gagtgtgacg acaccgacct caggcgtcat ggcggcggcg ttttccgccg
     5341 atttgtcatc gcaggcggtg agcatcgcgc cgcagaataa caacggtatt aacagctttc
     5401 ttcttctgtt cattttagtc cctgaaaatt cttgagaaat aacggttctt taaattgcgc
     5461 gcgaggagag atatgaggga tttacagacc agcggcatag tggggttgtc agccagtaag
     5521 gtgggataca ggtatagtga tcgacatggt gaggtcaacg acaaaaaaaa tgttgccgtt
     5581 ctgccaacag ttcctgccag cattcgggca acgaagggtt ctactggtgg atacacatac
     5641 caggggaata aagtcgtttt agcctctcct ttagtaatca ccgggggtaa tgaaatcagc
     5701 atctgcatcc ctcgtcatgc cagccatcaa tttcagttgc ttatgtcctg actaaaaata
     5761 agatgtgata cccagggtga cgatgtcgct catacgtctt agtttcagct tgtacataat
     5821 gttgaatttc tgaatcttta atgtttgttg cgaaatattg agcgtcgacg tgatattgct
     5881 ttcattttta tttttcagaa tcagttgcat aattttgaac tgattatgtg aaaaacataa
     5941 ttgtgaattc ttatggggca agtgtttacc ataagtaatc tcaagaagat ttttgatact
     6001 ttctttgcgg ctaacaaaat aaataggcgc tttagctttt agtttactga tgtgataagg
     6061 tgccaaaaca ataattctct cggcatctaa tttctccaga aatttaatcg cttcttcatc
     6121 aaggatatga ttgtgatagg tatcaatgat aaccttgaag ggtttattgc ctactttttt
     6181 gatctctgac agggaattga tttttatcat ttcgtgatta tctttcaact gccaaaagcc
     6241 ctgtaaaaga aaagaatctt tcgtcatgag aaaaatcata acttgctcct tagccgttat
     6301 cgtttcgaac atgtcatcct tttcattatt tacatccttg tccgaatcgt tgttcaatat
     6361 agtaaacgcc tataagaact ttgcccttcg tgaactaata cgtctattaa cactaatcaa
     6421 tacttcagat ttatccatca cgcactccat atattgatcc taagtaagat tcctggttgt
     6481 tatcaatttg taaatatcaa acaaaaagtt aacgtttgcg gattactgcc caagaataag
     6541 ttatcaataa ccagtttgtg atctctgaag aatattacta aagttaaaat gtaatccgat
     6601 ttaaatatcg agtctccttg tttcgactta agctggcaat tggattgcca gctttctttt
     6661 aacgcattga aattacctga gtaaataacg cattcatgtc ttcaggtttt tatatagcgt
     6721 ctggagacac ggatatttat gcaatgtaat caacgccagt tgcaaaaaaa tgaacccgga
     6781 ttacttattt aaccgcccat agcatcaacg cttacggaac tctttgttca ctttcccaca
     6841 gcacttttaa aacattaaac ctgactacgg aaaatatcag ccatgataat gtttgaaatg
     6901 gctaatttgc catggagtga aaaaaattag atgaaattca gtaggttgaa atgatcacta
     6961 gcaggtaatt atttcaatga tagtgcgcaa ttgatctaca acactgcgta gcggagagag
     7021 tattaatcgg atcatagtca catcaagtga ctatgatccg ggtgacaacc gggataatta
     7081 ttgctgctta acgaacaaac tggcgaagct gaacaggctg gcggcgctaa atatcagttc
     7141 aattcccacc agtgtggaaa ccagcgttac agacaccatc ggcgttgcac caaggaatat
     7201 ccaggcaatg acgatatcca gcacaccaat aacgagctgt agccagctgc ctttcattga
     7261 acgctgacga taccaactca tcaggcgaat aacccctgca acacagaaca aaccggcaat
     7321 aaatgccgca atggcaaaaa tgcccagctc cggtgcgcgg atgaagaaat agccgatcaa
     7381 taaataggcg actgcgacga ggaaaccgga taataccggc cagaaattat gactgcggtt
     7441 gctgaataac ccgacaataa gcgcaatacc cgagcagatt aataatgcac ccactactgt
     7501 gcttaaaata tcgccagaga cgaacgggaa actgatacac agcaacccga cgataaacag
     7561 cagcacggca ataaactgga ttgctctgcg atgctttttc agcatctcca gatcaaactt
     7621 caaaattgtt gccttatcta tatataacat agaaccaccc tataaaatta agaagaaaat
     7681 cccctgctat caatctatgc caaaaacgcg tctaagaatg cagtcgattt aataaaaatt
     7741 tc
//
LOCUS       DAPGWB010000194         7642 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.196, whole genome shotgun sequence.
ACCESSION   DAPGWB010000194 DAPGWB010000000
VERSION     DAPGWB010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7642
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.196"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..551
                     /locus_tag="RHX79_004145"
     CDS             <1..551
                     /locus_tag="RHX79_004145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199252.1"
                     /translation="LYINKDNIKVSYSLKINQTTPGILVNCDSNNNFACQTTMTEDVI
                     QRITTFFHTSPDVKNREIKLEWSGDKRDLPTAEAEISRVQASIIKWYASEYHNGRQVL
                     DEIQTPSAINSELYTKMIYLTRNWSLYPNGDGCVTISSPEIKNKYPAAICLALGFFLS
                     IVISVMFCLVKKMVDEYQQNSG"
     gene            complement(797..1492)
                     /locus_tag="RHX79_004146"
     CDS             complement(797..1492)
                     /locus_tag="RHX79_004146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDV2199253.1"
                     /translation="MDNRSEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTALNQQ
                     QRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISER
                     LQQECNAVVWDPAKGIENISQAEQAKVGVVYAEYGLTESGGVVLFSAAGRGRSLSLLP
                     ESSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVH
                     GPVKAVYLIIEDC"
     gene            complement(1485..2912)
                     /locus_tag="RHX79_004147"
     CDS             complement(1485..2912)
                     /locus_tag="RHX79_004147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDV2199254.1"
                     /translation="MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDE
                     LGHWEEWRDRAAQIRDHVLSNLDAYLYQLSEKVTQNGGHVWFAKTKEDATRYILQVAQ
                     RKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHK
                     DRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCL
                     VTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTG
                     PREAGHVDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYG
                     SIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDSVCPVRIPLSKLILRHRRVMAEK
                     GITAKAEQRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKFGAISDWMEAR
                     DLPEADGESFRSWFKKHLAQEKKNG"
     gene            complement(2923..3642)
                     /locus_tag="RHX79_004148"
     CDS             complement(2923..3642)
                     /locus_tag="RHX79_004148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDV2199255.1"
                     /translation="MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQ
                     PAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAE
                     KVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGL
                     ELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVVHLMEVRPEYLIGADVSCLLNISG
                     RLQREGQKVKVMHIAEVLMSR"
     gene            complement(4169..5023)
                     /gene="rclR"
                     /locus_tag="RHX79_004149"
     CDS             complement(4169..5023)
                     /gene="rclR"
                     /locus_tag="RHX79_004149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator RclR"
                     /protein_id="HDV2199256.1"
                     /translation="MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHAL
                     TQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFL
                     TSLPETLFLAPVNHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREW
                     IAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVS
                     GTTPLAVLTKLRLQIAAQMFSREMLPVVVIAESVGYASESSFHKAFVREFGCTPGEYR
                     ERVRQLAP"
     gene            5249..6574
                     /locus_tag="RHX79_004150"
     CDS             5249..6574
                     /locus_tag="RHX79_004150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HDV2199257.1"
                     /translation="MNKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCI
                     NIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFI
                     NNHSLRVHRPGGNLEIHGEKIFINTGAQAVVPPIPGITTTSGVYDSTGLLNLKELPGH
                     LGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIIL
                     NAHVERISHHENQVQVHSEHAQLAVDALLIASGRQPATASLHPENAGIAVNERGAIVV
                     DKRLHTTADNIWAMGDVTGGLQFTYISLDDYRIVRDELLGEGKRSTDDRKNVPYSVFM
                     TPPLSRVGMTEEQARESGADIQVVTLPVATIPRARVMNDTRGVLKAIVDNKTQRILGA
                     SLLCVDSHEMINIVKMVMDAGLPYSILRDQIFTHPSMSESLNDLFSLVK"
     gene            6683..6919
                     /locus_tag="RHX79_004151"
     CDS             6683..6919
                     /locus_tag="RHX79_004151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414837.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HDV2199258.1"
                     /translation="MFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLE
                     DAIADIARKYNASSWKVTSMRIDNNSTATAVLYK"
     gene            6931..7521
                     /gene="rclC"
                     /locus_tag="RHX79_004152"
     CDS             6931..7521
                     /gene="rclC"
                     /locus_tag="RHX79_004152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001365941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reactive chlorine species resistance protein
                     RclC"
                     /protein_id="HDV2199259.1"
                     /translation="MEKYLHMLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSIT
                     PFVANSPLMSFFYEHPEDYKQYLTHEGEYKPEARAWQSANNTYGFSNGLGVVEVIIAL
                     LVLANPVNRWLGLLGGLMAFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLV
                     LKDTLMLAGAVMIMADSAREILKQRSNESCSTLKAE"
BASE COUNT         2101 a         1836 c         1655 g         2050 t
ORIGIN      
        1 ttctgtatat caataaagat aatataaaag tgagttacag cctaaaaata aaccagacaa
       61 caccaggcat acttgttaac tgtgatagca ataataactt tgcctgtcag accacaatga
      121 ctgaagatgt tatacagcga attactacat tttttcacac cagcccagat gtcaagaaca
      181 gagaaataaa gctggaatgg tcaggagata agagagattt accaactgct gaagcggaaa
      241 tatctcgcgt gcaggcgtct attatcaaat ggtatgcgtc agaataccat aatggcaggc
      301 aagttctcga tgagatacaa acaccttcag caattaacag tgagctttat acaaaaatga
      361 tatacctgac caggaactgg tcattgtatc cgaacggtga tggctgtgta actataagct
      421 caccagaaat aaaaaataaa taccctgctg ccatttgcct ggctctggga ttttttctaa
      481 gcattgtaat ttctgtaatg ttttgccttg tcaaaaaaat ggtagatgaa taccaacaaa
      541 actctgggta gtaataaaca gcattctgat agagagtgcc tgtataaagc tgaagtgaca
      601 atgaccggga agggaacccg ttttcaggaa tggatgcctg tctttttcac tgtaaatatc
      661 ctggcattac taatgccagg atatttacag aagagcagca taaccatgac ggaacggggt
      721 taagtcaggt tgtccttaac gctattttca acctcgtatg ccttcttcag gtttatgttc
      781 agatctcata tctctctcag caatcctcaa taatcagata caccgctttc accggaccat
      841 gaaccccgac gactttgata agctcaatat ccgccgttga actagggccg ctaatgatgt
      901 taatgcagga cggcattcgt tcaccggcct gcgctttctg atgcaatttt tctgcgagtt
      961 gcgctacacg cggcaagata gtgcttttac gcaggataaa aagagaagat tccgggagca
     1021 ggctcaatga acgcccgcgc ccggcggcgg aaaaaagaac cacgcctccc gattcggtta
     1081 aaccatattc agcatacacg acacccactt tagcctgctc tgcttgtgat atgttctcaa
     1141 tacctttcgc cggatcccaa acaacggcat tgcattcctg ctgcaaacgt tcgctaatcc
     1201 ccaattcctc tagcctcgtg tcaccgctaa tcacgaccga ctgatctccc agctctttac
     1261 acagacgtat tgcagcttct gccgccttcg cctcgctggt cagctcacag cgcgtcaaca
     1321 taacatcgct ggcaaactga ataaacgcgt cacagcgctg ctgttggtta agtgcggtaa
     1381 gccgctcgtt agcatagttg ttaagcggcg catcttctgc ttgcggttca agtcgcaacg
     1441 ggcgacccag tgcctgagca acgttattca aaaattcgct ccgattatcc attctttttc
     1501 tcctgcgcca gatgtttctt aaaccaacta cggaaactct ctccgtcagc ttcaggaaga
     1561 tcgcgtgctt ccatccagtc actaatcgcg ccaaatttga gtggtgtttt gccgccattg
     1621 ataaaccagc ttgccgcatg agcaccggcc atcatcccga ctttccacaa tcctggatga
     1681 ctattggcat aagcgaacat ttttatcgcc cgttgctctg cttttgcggt gatccctttt
     1741 tcagccatca cccgacgatg acgcaaaatc agttttgaca gcggaatacg caccggacac
     1801 acgctgtcac aagcagtgca taaagagcag gcgtagggta aatctttaaa atctttatag
     1861 ccgccaagta gcggagaaat caccgcacca attggccctg gataaataga gccatatcca
     1921 tgaccgccaa tatggcgata tgccggacaa gtattcatac aagccccgca gcgaatacag
     1981 cgcagcacat cccgaaattc agaggccagc acctcagaac gcccgttatc gacaataacc
     2041 agatgaaact cttcaggacc atcaacgtgc cccgcttcgc gcggtcctgt cagccaggtg
     2101 ttgtatcccg tcaaacgtgc accaacggca ctgcgcgcca gcatggtgat caatacatct
     2161 acctcggcaa acgtgggggc aatacgctcc attcccatca ctgcaatatg cgttttaggc
     2221 agcgtggtac acattcgcgc attaccttca ttggtcacca ggcataccga acctgtctct
     2281 gccaccgcga aattacagcc ggtaatacct atttcagcac tgaggaaatc ttcgcggatt
     2341 ttttgccgga tgaataaggt catcgcttca ggcgtttccg gcccctcata gcccagacgt
     2401 tcgtgtagca ctcgacggat ctgatggcga tctttatgaa ttgccgggac cacaacatga
     2461 gatggcggat cttgatccag ctggagaata tattcaccca gatcggtttc aatcacctga
     2521 atgccagcat cctgcaacac atgattgaca ccaatctctt cggtcaccat cgatttagat
     2581 ttcaccacct tccgggcatt tttgcgttgg gcaacctgta aaatgtagcg ggtagcgtct
     2641 tctttggttt ttgcaaacca gacgtgaccg ccgttttgcg tcactttttc tgagagctgg
     2701 tacagataag cgtcgagatt actcagaaca tgatcacgta tctgggcggc ccgatcgcgc
     2761 cactcctccc agtgccccaa ttcatcgacc attttttgcc gatttgcccc aatacgctgc
     2821 tgcgcgtttg ccaccgcttt gcgcatgatc ggatcttcaa tttgctgacg gatgcgtgtc
     2881 ttaaaatctg tattactggt tttgatcgac atctttatat cctcagcggc tcatcaacac
     2941 ttcagcaata tgcatcactt tgactttctg cccttcccgt tgtaatcgcc cactgatgtt
     3001 cagcaggcaa ctcacgtcag caccaattaa atactcaggg cggacttcca tcaggtgcac
     3061 aaccttttct ttcaccatct cgccggatat ttcggccatt ttgaccgaga acgtgccgcc
     3121 aaatccgcag caggtatcct gttcagcaaa ggtcaacagc tccagtccac gcacattttt
     3181 cagcagcgta agtggctcgt ccttcactcc cagcttacgg gccaggctac aagatgggtg
     3241 atacacagct ctcccttgca aactggcacc tacatcgact acccctaatt tattaacaat
     3301 aaaagaggtg agatcctgca tacgcgcggc aaccttttcg gcacgtgatg cccattcagg
     3361 ttcatccgcc agatacgtcg ggtaactttt tacggcatag gtgcaagagc cagccggtga
     3421 aataatggga tcgtcgttat cctccagtgc ggcgatcaga tttttcatcc ctggaatcgc
     3481 ttctttgata taaccgctat tgatcgcagg ctgaccgcag catccctgtt tctccgggaa
     3541 atttacgcga cagccgagtt tttccagtag cagcacggag tctcgtgcca ttcttgattt
     3601 cagggcgtca ccaatacagg tgacaaagaa attgacattc acaactaata ctccattact
     3661 tcatgcccat ttatgcccga tgtttccccc ccaccggggg atcaatcatc aataaatatg
     3721 gcgttctttt ttaattggct agcaacatac cacccctcat ttgtatgaca aatgataatc
     3781 tttcatccaa acttcaaatg caataactaa ttttatttct ttcggcatcg ctcacatttt
     3841 atggggaaat cgacgttcat ttttggcata agaaatccat ttaaaaaggc tacatccctt
     3901 atacctattc agagctactt attcaggggt tattgagata tacactgatg gtgtacaaaa
     3961 aaatcaccga caataatcac gtatcaagta atagtcgggg ttttatttaa ttgaagcaat
     4021 ttagtttgca tttttattta aaaactgagc tagagtccat cagaaaaaaa tatataaagc
     4081 ccaaaccacc gttggaaata gaaatagttg aaaggctcac aactcccgga atgcggatta
     4141 tctttgccct gatttctggc ggttttattc agggtgcaag ctgtctgacc ctttcccgat
     4201 attctcccgg agtacaacca aactcgcgga caaacgcctt gtgaaaagat gattcactgg
     4261 catagcctac tgactcagcg atcaccacaa cagggagcat ttcccgggaa aacatctggg
     4321 ccgctatttg tagacgcaac tttgttaata cagccagcgg cgtggttccg gaaacatcac
     4381 ggaaaagctg ggcaaaactt gcccgggaca tgtgggcgat gctggccagc gattcgacgg
     4441 tccaggcgtg tcctggcatt tccagcattt gctgtattac cgcaccaaga cgtggatgca
     4501 gaagcaaact gagaatgttt ttctcagtat taacctgtgc aatccactca cgcaccgcga
     4561 gggtaaagaa tgtagcgcag atctggctac acagtgcatc cactcccggc atcgccgatc
     4621 tggattcctg ttgtaaaaac gggatcgcct ccctcagcca gttatattcc acgctgtggt
     4681 taactggtgc taaaaacagc gtttccggca aagacgttaa aaaataacgc gccgaatgtt
     4741 gcagccgaag agtgccacag acaatacagg tcgattcatt atcgacatga ctcaggcgat
     4801 gagctgaatt ttgtggtagc aggaccacat ttcccgggcg taatgtaaaa atctctcccg
     4861 tcggcatttc cagcttcgcc gctccttgcg ttaacgcatg ccaacgaata accgataatt
     4921 ccccggcacc atgtggaagc tgccagtcac ttcctaacac gcaattctta tcgatcgttc
     4981 cttgtggagc gttaagcatc aacaaacggc taagggcatc catatcagac tcctgagtgg
     5041 tttttgatta caaacaccaa caatcttagt aaataattaa tgtaatacca tcaaatagtt
     5101 aatcatgatt tttgttttgt gattctgatt aagaaaaaga aaataccaga cgataagaca
     5161 aaatatcaag cgttgtgaag aaatgttatt tgctcttttg cgtctatagt catgatgtca
     5221 aatgaacgcg tttcgacagg aaatcatcat gaataaatat caggcagtta ttattggttt
     5281 tggcaaggct ggaaaaacat tagccgtcac gctggcaaaa gcaggttggc gagtggctct
     5341 catcgaacaa tcaaatgcaa tgtatggcgg gacctgtatt aatatcggct gtatcccaac
     5401 caaaacattg gttcatgacg cacagcagca cacagatttt gtccgtgcca tacagcgtaa
     5461 aaatgaagtg gttaattttt tacgtaataa gaattttcat aatcttgcgg atatgcccaa
     5521 tatcgacgtg atcgacggcc aggcggagtt tatcaataat catagcctgc gtgttcatcg
     5581 gcctggggga aatctggaga ttcatggcga gaaaattttt attaataccg gtgcacaagc
     5641 cgtggttccg ccaattcctg gaattaccac cacgtctggt gtatatgaca gcaccggatt
     5701 acttaatcta aaagaattgc ctgggcattt aggtattttg ggcggcggat atattggcgt
     5761 tgagttcgcc tctatgttcg ctaattttgg cagcaaggta accattttag aagcagcttc
     5821 gctgtttttg cctcgggaag atcgggatat tgctgataat atcgcgacga ttttacgcga
     5881 tcagggcgtc gatattatcc tcaatgccca tgtggagcga atcagtcacc atgaaaatca
     5941 agtgcaagtg catagcgagc acgcccaact ggcggtggat gcactgttaa tagcttccgg
     6001 tcgtcaaccg gctaccgctt cgttacatcc agaaaatgcc ggtatcgcag taaacgagcg
     6061 cggggcaatt gtcgttgaca agcgattaca taccaccgca gacaatattt gggcgatggg
     6121 agatgttacc ggcgggctgc aatttactta tatatcactg gatgattacc gcattgtacg
     6181 tgatgagtta ctgggtgaag gcaaacgtag tactgatgat cggaaaaatg tgccttattc
     6241 cgtatttatg acaccgcccc tgtccagggt tggtatgaca gaagaacaag ccagagagag
     6301 tggtgctgat attcaggtgg tgacattgcc tgtagctaca attccgcgtg ccagagtgat
     6361 gaacgatacc cgtggggtat taaaagcgat tgttgataat aaaacccaac gtatattagg
     6421 ggcatcactg ctgtgtgttg actcccacga gatgattaat atagtgaaaa tggtgatgga
     6481 tgccgggctg ccttatagca tattacgcga tcagatattt actcatccgt cgatgagcga
     6541 atcactcaat gatctatttt cattagtcaa ataaactcaa aatcagacgc cagaacaaat
     6601 attctggcgt ctcagagaaa agaatcttat taattccctg ttactctata acttcttaat
     6661 cacttcattg atggtatttt atatgttcaa aaaatctgtt ttatttgcaa cactattatc
     6721 tggcgttatg gcattttcca ccaatgcaga tgataaaata attctgaaac atatcagcgt
     6781 ctcgtcagta tcagcatcac cgacagttct ggaggatgcc attgctgata tagccagaaa
     6841 atataatgct tcatcctgga aagtcacatc gatgcgaatt gataataatt caaccgcaac
     6901 agcagtattg tataaataag gatgtttaca atggagaaat acctgcacat gttaagtcgg
     6961 ggagataaaa ttggcctgac attgattcgt ctgagtattg cgattgtttt tatgtggatt
     7021 gggttattaa agtttgtccc ttacgaggca gacagcatta caccattcgt cgcaaacagt
     7081 ccactaatgt cgttctttta tgaacacccg gaagactata aacagtatct gactcacgaa
     7141 ggcgaataca aaccagaagc aagggcatgg caatcggcca ataataccta tggtttttcc
     7201 aacggtcttg gcgtcgtgga ggtgattatt gctctgctgg ttttggctaa tcctgtcaat
     7261 cgctggttag gtttattggg agggctgatg gcatttacca caccgttggt aacactctca
     7321 tttttaatca ccaccccgga ggcatgggta cccgcattgg gtgacgctca tcatggtttc
     7381 ccttatttat ccggtgctgg tcgcctggta ttgaaagata ctctgatgct ggcaggtgct
     7441 gtcatgataa tggcagattc ggcgcgggaa attcttaaac aacgcagtaa tgaatcatgt
     7501 tcaacgttaa aagctgaata attataatct gaataatatc tattgttcac tttgtcagac
     7561 gtcaggcttt ccttgctaat gggtgaagcc tgacgccata ttaccggaga tatgacagag
     7621 tgaagatcaa tatcactccc ct
//
LOCUS       DAPGWB010000195         7462 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.197, whole genome shotgun sequence.
ACCESSION   DAPGWB010000195 DAPGWB010000000
VERSION     DAPGWB010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7462
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.197"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            24..878
                     /gene="gatY"
                     /locus_tag="RHX79_004153"
     CDS             24..878
                     /gene="gatY"
                     /locus_tag="RHX79_004153"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416599.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatY"
                     /protein_id="HDV2199260.1"
                     /translation="MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAP
                     VIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVM
                     IDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADAFYTNPAQA
                     REFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDI
                     QQTIKLGICKINVATELKNAFSQALKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIA
                     DCGCEGRA"
     gene            907..2169
                     /gene="gatZ"
                     /locus_tag="RHX79_004154"
     CDS             907..2169
                     /gene="gatZ"
                     /locus_tag="RHX79_004154"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatZ"
                     /protein_id="HDV2199261.1"
                     /translation="MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIE
                     ATSNQVNQFGGYTGMTPADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAA
                     MEKSVELVKAYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQ
                     REQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIA
                     IVVQPGVEFDHSNIIHYQPQEAQALAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFA
                     ILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGF
                     NDSLLDIRYSLSDRIRYYWPHSRIKNSVETMMVNLEGVDTPLGMISQYLPKQFERIQS
                     GELSAIPHQLIMDKIYDVLRAYRYGCAE"
     gene            2179..2631
                     /gene="gatA"
                     /locus_tag="RHX79_004155"
     CDS             2179..2631
                     /gene="gatA"
                     /locus_tag="RHX79_004155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIA"
                     /protein_id="HDV2199262.1"
                     /translation="MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIARE
                     AEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVEVSLVIALI
                     VENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE"
     gene            2662..2946
                     /gene="gatB"
                     /locus_tag="RHX79_004156"
     CDS             2662..2946
                     /gene="gatB"
                     /locus_tag="RHX79_004156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIB"
                     /protein_id="HDV2199263.1"
                     /translation="MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEI
                     ETYMDGVHLICTTAKVDRSFGDIPLVHGMPFISGVGIEALQNKILTILQG"
     gene            2950..4305
                     /locus_tag="RHX79_004157"
     CDS             2950..4305
                     /locus_tag="RHX79_004157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HDV2199264.1"
                     /translation="MFSEVMRYILDLGPTVMLPVVIIIFSKILGMKAGDCFKAGLHIG
                     IGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPI
                     AILVNVAMLLTRMTRVVNVDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKL
                     GDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKF
                     GPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAK
                     QARSRLQAKFGGQEFLIGLDPALLLGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGD
                     LATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGG
                     MVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFMTWRRARGFIKQEKAVLA
                     E"
     gene            4353..5393
                     /gene="gatD"
                     /locus_tag="RHX79_004158"
     CDS             4353..5393
                     /gene="gatD"
                     /locus_tag="RHX79_004158"
                     /EC_number="1.1.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDV2199265.1"
                     /translation="MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPR
                     IFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQ
                     CAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCE
                     NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAP
                     QMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKI
                     LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFTQAVRDIA
                     RNAMPGKVLLIP"
     gene            5499..6272
                     /locus_tag="RHX79_004159"
     CDS             5499..6272
                     /locus_tag="RHX79_004159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020238881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDV2199266.1"
                     /translation="MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLE
                     QKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVI
                     LDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGS
                     IAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNR
                     RGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV"
     gene            complement(6354..7253)
                     /gene="yegS"
                     /locus_tag="RHX79_004160"
     CDS             complement(6354..7253)
                     /gene="yegS"
                     /locus_tag="RHX79_004160"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase YegS"
                     /protein_id="HDV2199267.1"
                     /translation="MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKG
                     DAARYVEEARKLGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATS
                     VGIPEALDKALKLAIAGNAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALG
                     GVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALIND
                     GLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHEITFNLDGEPLSGQ
                     NFHIEILPAALRCRLPPDCPLLR"
BASE COUNT         1879 a         1676 c         1943 g         1964 t
ORIGIN      
        1 aaaacaaacg acaggatatg aaaatgtacg tggtatcgac aaagcagatg ctgaacaacg
       61 cacagcgcgg cggttatgcg gttccggcat tcaatattca caatctcgaa acgatgcaag
      121 tggtggtgga aaccgctgcc aacctgcatg cgccggtcat catcgccgga acgcctggca
      181 catttactca tgctggtaca gaaaatctgt tggcgctggt cagcgcgatg gcgaagcaat
      241 atcaccatcc actggcaatt catctcgacc atcacacgaa atttgacgat atcgctcaga
      301 aggttcgttc tggcgtgcgc tcagtcatga ttgacgcctc gcatttgcct tttgcgcaaa
      361 atatttcacg ggtcaaagag gtggtggatt tttgccatcg ctttgatgtc agcgtcgaag
      421 cggagctggg gcaacttggc ggccaggaag atgatgtgca agtcaatgaa gccgatgctt
      481 tttataccaa ccccgctcag gcgcgtgaat ttgccgaggc aaccggaatt gattccctgg
      541 cggtcgccat cggcacggct catgggatgt atgccagcgc accggcgctt gatttttctc
      601 gactggagaa cattcgccag tgggtgaact taccgctggt gctgcatggc gcgtcagggt
      661 tatcgactaa ggatattcag caaaccatca aactggggat atgcaaaatc aacgttgcaa
      721 cggagctgaa aaatgccttc tcgcaggcgt taaaaaatta cctgaccgag caccctgaag
      781 cgaccgatcc ccgggattat ttgcagtcgg ctaaatccgc aatgcgcgat gtggtgagca
      841 aagtgattgc cgattgtggc tgcgagggca gggcataacg cacctgccat ttaacaagga
      901 aaaaacatga aaacgttaat tgcccggcat aaagctggtg aacatatcgg catatgttca
      961 gtctgttctg cccatccgtt ggttatcgaa gcggcgctgg catttgatcg caacagcacg
     1021 cgcaaagtgc tgattgaagc aacgtcaaac caggtcaatc aatttggcgg ttataccgga
     1081 atgacaccgg cagactttcg cgaatttgtt tttacgattg ccgataaagt tgggtttgca
     1141 cgcgaacgca ttattctcgg cggcgatcat ctggggccaa actgctggca gcaagaaaat
     1201 gcggatgcgg cgatggaaaa atccgtcgag ctggtaaaag catatgttcg tgctggcttc
     1261 agtaaaattc atcttgatgc gtcaatgtcc tgcgcggggg atcccatacc gttagcacca
     1321 gaaacggttg cggaacgagc tgctgtgctt tgctttgctg cggaaagtgt ggcgacagat
     1381 tgccagcgtg agcaactgag ctatgtcatt ggcaccgaag ttccggttcc gggcggtgag
     1441 gccagcgcca ttcagtcagt acacatcacc catgttgaag atgccgccaa tactttacgt
     1501 acgcatcaaa aggcctttat tgcccgtggg ctgacagagg cgttaacacg tgtgattgcc
     1561 atcgtggtgc agccgggtgt ggaatttgat cacagcaata ttatccatta tcagccgcag
     1621 gaagcgcagg cgctggcgca atggatagaa aacacccgaa tggtttatga agcacattct
     1681 accgattacc agacccggac ggcttattgg gaattagtcc gcgatcactt tgcaatattg
     1741 aaagtcggtc ccgcattaac ctttgcttta cgcgaggcga tatttgcact ggcacaaatt
     1801 gagcaggaac ttatcgcccc cgaaaatcgc agcggttgcc tggcggtaat tgaagaagtg
     1861 atgctcgacg aaccgcaata ctggaaaaaa tattatcgta cgggttttaa cgattcatta
     1921 ctggatattc gttacagcct gtcggatcgt attcgttatt actggccgca tagtcggatt
     1981 aaaaatagcg tcgaaacgat gatggtgaat cttgaaggcg tggacacccc actgggcatg
     2041 attagtcagt atcttcccaa acaatttgaa cgcattcagt ccggggaatt atcagcaata
     2101 ccgcatcagc tgattatgga taaaatttat gatgttttgc gcgcctatcg ctacggctgt
     2161 gcggaataag gacggtatat gactaacctg tttgttcgta gcggaatttc ttttgtcgat
     2221 cgtagcgaag ttttaaccca tatcggtaat gagatgctcg ccaaaggtgt ggttcatgat
     2281 acctggccac aggcattaat tgccagagaa gcagaattcc ctaccgggat aatgcttgag
     2341 cagcacgcca ttgcaatacc gcattgtgag gcgattcatg ctaagtcgtc agccatttat
     2401 ctgttaaggc caacaaataa agttcatttt cagcaagcgg atgatgataa cgacgtggag
     2461 gtatcgttgg ttattgcgtt gattgtggaa aatccgcagc agcaattgaa acttttacgc
     2521 tgtttatttg gcaagttaca acagcccgat atcgtcgaga cactaatcac tcttcctgaa
     2581 acccagttaa aggaatactt cacaaagtat gttttagatt cagacgaata aatccctctg
     2641 ttacaattaa aaggactatt tatgaaacgc aagattattg tcgcttgcgg aggcgcggtt
     2701 gcgacctcta cgatggcggc ggaagaaatt aaagagttgt gtcagaatca taatattcct
     2761 gttgaattaa tccagtgtcg ggttaatgaa atagaaacct atatggatgg tgtgcatttg
     2821 atatgcacca ctgccaaagt ggatcgtagt tttggcgata ttccgttagt tcacggcatg
     2881 ccttttattt ctggtgtcgg tatcgaagca ttacaaaata aaattctgac tatcttacag
     2941 gggtgaccta tgttttcaga agtcatgcgt tatattctcg acctcggccc tacagtgatg
     3001 ctgccggttg tcatcattat tttttctaaa atattaggca tgaaggcagg cgattgcttt
     3061 aaagcgggtc tgcatatcgg gattggcttt gttggcattg gccttgtgat tggcttaatg
     3121 ctggattcca ttggtccggc ggcgaaagcg atggcggaaa atttcgacct gaatctgcat
     3181 gtggtcgatg tcggctggcc gggctcttca ccaatgacct gggcgtcgca aattgcgctg
     3241 gtggcgattc cgattgcgat attggttaac gtggcgatgt tactgacccg tatgacgcgg
     3301 gtggtaaatg ttgatatctg gaatatctgg catatgacct tcaccggcgc gttgctgcac
     3361 ctggcaaccg gttcatggat gatagggatg gcaggtgtgg taattcacgc ggcgtttgtt
     3421 tataagctcg gcgactggtt tgcccgcgat acccgaaatt tctttgagct ggaaggtatt
     3481 gctattccgc acggtacgtc ggcgtatatg gggccgattg cggtgctggt cgatgctatc
     3541 atcgagaaaa tcccaggcgt taaccgaatt aaatttagcg ccgacgatat tcagcgcaaa
     3601 tttggccctt ttggcgaacc tgtcaccgtg ggttttgtga tggggctgat tatcggcatc
     3661 ctcgcgggtt acgatgtcaa aggtgtattg cagctggcgg taaaaacggc ggcagttatg
     3721 ctgctgatgc cacgggtgat taaacccatc atggatggtt taacgcccat cgctaagcag
     3781 gcccgtagtc gtttacaggc gaagttcggc ggtcaggagt tcctgattgg cctggatccc
     3841 gcattactgc tggggcatac ggcggtggta tcggcaagcc tgatttttat cccactcacc
     3901 attttaattg ctgtttgtgt gccgggtaat caggtgctgc cgtttggcga tcttgccact
     3961 atcggcttct ttgtggcgat ggcggtcgcg gtgcatcgtg gaaatctgtt ccgcacctta
     4021 atctcgggtg tcatcattat gagcatcacc ctgtggatcg cgacgcaaac tattggtttg
     4081 cacacccaac tggcggctaa tgctggggcg ttaaaagccg ggggtatggt ggcttcaatg
     4141 gatcagggcg gttctcccat tacctggtta ctgattcagg ttttctcccc gcaaaatatt
     4201 cccggtttca ttattatcgg tgcaatttat ctgaccggta ttttcatgac ctggcgtaga
     4261 gcgcgtggct ttattaaaca agagaaagcc gttctcgcag aataattttt acctgagggg
     4321 gaggttatcc cccttaacaa tcaggagttt ttatgaaatc agtggtgaat gatactgatg
     4381 gtatcgtgcg cgttgcagaa agcgtcattc ctgaaattaa acatcaggat gaggtgcggg
     4441 taaaaattgc cagctcgggc ttatgtggtt ccgatttacc caggatattt aaaaatggtg
     4501 cacattatta tccaataacg ttaggccatg aatttagcgg ctatattgat gcggtgggat
     4561 ccggtgttga tgatttacac cctggcgatg cggttgcctg tgtgccgtta ttaccctgtt
     4621 ttacttgtcc agagtgtctg aaagggtttt attcccagtg cgcaaaatat gattttattg
     4681 gctcgcggcg tgatggtgga tttgctgaat atattgtcgt taagcgaaaa aatgtctttg
     4741 ctctacccac ggatatgcct attgaggatg gggcttttat tgagccgatt accgttggtc
     4801 tgcatgcttt tcatttagcg caaggttgtg agaataaaaa cgttattatt attggtgccg
     4861 gaaccattgg cctgctggct attcagtgcg ctgtcgcgct gggagcaaag agtgtgacgg
     4921 ctatcgacat tagctcagaa aaactggcac tggcaaaatc tttcggtgcg atgcaaacat
     4981 ttaacagtag cgaaatgagc gcgccgcaaa tgcagagcgt tttacgcgaa ctgcgtttta
     5041 atcagcttat cctcgagacg gctggcgtac cgcaaactgt cgaactggcg gtagagattg
     5101 ccggtcctca tgcccaactg gcgctggtgg gcacgttgca tcaggatctg catttaacat
     5161 cggcaacgtt tggcaaaata ttgcgtaaag agctgacggt tatcggcagt tggatgaact
     5221 attccagccc ttggccgggg caggagtggg aaacggcgag ccggttgctg acagaacgta
     5281 agttaagcct ggagccatta atcgctcacc gtggaagctt tgaaagcttc acccaggcgg
     5341 tgcgcgacat cgctcgtaat gccatgccgg gcaaagtgtt gctcattcca tgaaaccgcg
     5401 ggccagcgtg atgctggccc ggtattgtgc aaaacagatc attcaccaat ggtccccctt
     5461 cgtttacact agccacaatt gaatatgggt aaatgacgat gaattcattc gagcgaagga
     5521 ataagatcat ccaattagtg aatgaacagg gaaccgtgct tgttcaggat ctggcgggag
     5581 tatttgctgc ctcggaagcg acaatccgtg ccgatttgcg ctttctcgaa caaaaaggcg
     5641 tggttacgcg ctttcatggc ggtgcggcga aaataatgtc cggtaatagt gaaaccgaga
     5701 cccaggaagt cgggtttaaa gagcgatttc agctcgccag cgcgcccaaa aacagaatag
     5761 cgcaggcggc agtcaaaatg atccatgaag ggatgaccgt tattctcgac agcggaagta
     5821 ccacaatgct tatcgccgaa ggattaatga ccgctaaaaa tatcacggtg attaccaaca
     5881 gtctcccggc tgcgtttgcc ctttccgaaa ataaagacat tactctggtc gtctgcggtg
     5941 gcacggtccg ccataaaacg cgatctatgc atggatctat tgctgaacgt tccctgcagg
     6001 atattaatgc cgatttaatg tttgtcggtg ctgatggtat tgatgcggtt aatggtatta
     6061 cgacctttaa tgaaggttat tcgattagcg gtgcgatggt caccgccgct aataaagtga
     6121 ttgccgttct cgattcatcg aaatttaacc gtcgcggttt taatcaggta ctgccaatcg
     6181 aaaaaattga cattattatt accgatgatg ctgtatcaga ggtggataaa ctggcattgc
     6241 agaagacacg ggtaaaatta attacggtgt agtattgttc tgtatgccgg ataaggtatt
     6301 tacaccgcat ccggcatttc ggattctccc tggttcaaga gagaatagtt tgattaacgc
     6361 aataatggac aatctggtgg taatcgacaa cgcaacgccg ccggaagtat ttcaatatga
     6421 aagttttgtc cgctcaacgg ttcgccatca agattaaaag tgatttcgtg tggggcttgt
     6481 atatcaaacc acgacgaagc gccttcgata atattcgggt tatcttcgtc agattttaag
     6541 gttgatacga gagccggaag aatttcatcg ccggtaaaaa tgcgcagttg cagcaagcca
     6601 tcgttaatta acgcgttcgg acacaattgc tgaccgccac cggcctgacg cccgttacca
     6661 ataccaatga ccagggcgtc accttgccag tgaaagtttt caccgcggat ttcacaacgg
     6721 tccggttgca gagtatccat gcgcattaag ccatgaatga tgtaagagac gccacccagc
     6781 gcggctttta atttttccgg cgtttctgtg gtaatacgcg tcccaaatcc gcctgtcgcc
     6841 atattaataa aacaggtttg tttgttgacc tgcgccatat ctatcgcaat ggcgttaccg
     6901 gcaattgcca gtttcagcgc cttatccagt gcctcaggaa tccctacact ggtggcaaaa
     6961 tcattggcgg ttcctaatgg caaaattccc agcgcgggta tgtcatcccc ctcacactga
     7021 atcaacgccg tagaaacttc attaatggtg ccatcgccac caccggcaat caccgttgcg
     7081 acgcccaact tccgggcctc ctctacatat cgtgcggcat cgcctttctc ccaggtgacc
     7141 cgcacatgga tcgtcattcc ttcctcacgc aacagcataa ttgcttcgcg caagggtaga
     7201 ttgtcagtac ttttgccatt aagaatcagt aagctggcgg gaaattctgc catgatcgta
     7261 tgtgccttta tgattggtct gtagatagtg tagagcagaa aacaaaaggt ggagtcagaa
     7321 caggatgaaa gtcggaggat aaaaagtcag ttcaagtatg gaggattcag tggttaccac
     7381 caggagcttg caatggggac agcgaatact aacggctgcc accgataaat ttcaaaaaag
     7441 agcatatacc taatattcaa ct
//
LOCUS       DAPGWB010000196         7415 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.198, whole genome shotgun sequence.
ACCESSION   DAPGWB010000196 DAPGWB010000000
VERSION     DAPGWB010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7415
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.198"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..4780)
                     /locus_tag="RHX79_004161"
     CDS             complement(<1..4780)
                     /locus_tag="RHX79_004161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001289028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HDV2199268.1"
                     /translation="MSEGPGGPQGATAGGTLAMRMLSQQAMVASQMKRAANDKAIAQM
                     LAAKKSGPPAARLGDEIQHKSFLGALAGAVLGAIVTIAEGCLIMAACATGPYALVLVP
                     ALMYASYKASDYVEEKQNQLESWINSFCDTDGAINTGSENVNINGKPAARAAVTLPPP
                     PPPGAIPEVPQGEPSWGDIATDLLESAAEKAVPLAKAWGNAVITLTDSNAGFMDRLCA
                     GTSLLFPAGPVLMEFATMVGGRGEIKKDVDFPEAGEDTALCDKENKPPRIAQGSSNVF
                     INNQPAARKGDKLECSAAIVEGSPDVFIGGEQVTYLDIQPEFPPWQRMILGGITIASY
                     LLPPAGLLGKLGNLAKLGKLGNLLGKSGKLLGAKLGALLSRTKNALKNTYNVLKKFIK
                     DPVDPVTGAYCDERTDFTLGQTLPLSFTRFHCSVLPLHGLTGVGWSDSWSEYAWVREQ
                     GKRVDIISLGATLNFAFDGESDTAVNPYHAQYILRRRDDYLELFDRDALSSRFFYDAF
                     PGMRLRHPVTDDTSDDRLAHSPADRMYMLGGMSDTASNRITFERDSQYRITGVSHTDG
                     IRLKLTYHASGYLKAIHRTDNGIQTLATYEQDARGRLTEADARLDYHLFYEYDAADRI
                     IRWSDNDQTWSRFTYDEQGRCVTVTGAEGYYNATLDYGDGCTTLTDGKGTHRYYYDPD
                     GNILREEAPDGSTTTYEWDEFHHLLARHSPAGRVEKFEYNAAHGQLSRYTAADGAEWQ
                     YRYDERGLLSNITDPAGQTWTQQCDERGLPVSLVSPQGEETRLAYTAQGLLSGIFRQD
                     ERRLGIEYDHHNRPETLTDVMGREHHTEYSGHDLPVKMRGPGGQSVRLQWQQHHKLSG
                     LERTGTGAEGFRYDRHGNLLAWTDGNGVVWTMEYGPFDLPVARTDGEGHRWQYRYDKD
                     TLQLTEVINPQGESYLYILDNCGRVTEERDWGGVVWRYRYDADGLCTARVNGLEETIL
                     YSRDAAGRLAEVITPEGKTQYAYDKSGRLTGIFSPDGTSQRTGYDERGWVNVTTQGRR
                     AIEYHYPDEHTVIRCILPPEDERDRHPDESLLKTTYRYNAAGELTEVILPGDETLTFS
                     RDEAGREVFRHSNRGFACEQGWNAASQLVTQRAGFFPEEATWGGLLPSLVREYRYDSA
                     GNVSAVTSREDYGRETRREYRLDRNGQVTAVTASGTGLGYGEGDESYGYDSCGYLKAQ
                     SAGRHRISEETDQYAGGHRLKQAGNTQYDYDAAGRMVSRTKHRDGYRPETERFRWDSR
                     DQLTGYCSAQGELWEYRHDASGRRTEKRCDRKKIRFTYLWDGDSIAEIREYRDDKLYS
                     VRHLVFNGFELISQQFSRVRQPHPSVAPQWVTRTNYAVSDLTGRPLMLFNSEGKTVWR
                     PGQTSLWGLALSLPADTDYPDPRGELDPEAAPGLLYAGQWQDAESGLCYNRFRYYEPE
                     TGMYLVSDPLGLQGGEQTYRYVPNPLGYIDPLGLAKTSVPAEKISLSDKARDLFRQGK
                     VREALDVHYEDLVRRKLGGISQEIAGREYDVVTDKIIAQVKRTYSSIDNPKNFLSKST
                     RTQIKKTIELAEEQGKEAQFWFKYGVSPKVREYIESKGGKV"
     gene            complement(4800..5261)
                     /locus_tag="RHX79_004162"
     CDS             complement(4800..5261)
                     /locus_tag="RHX79_004162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DcrB-related protein"
                     /protein_id="HDV2199269.1"
                     /translation="MQFTFNEGHIQLPSQWQDQSMQVLVSTDNSGINLVITREAVPQG
                     TLTPELYQETLALYQGKLDGYTEHACREITLAEAPAWLLDYSWNGPEDEGNQGRISQI
                     AVFQRRGDTLLTFTFSTSLSLKNSQKTMLLEVIKSFTPLPPENDIQKDQPR"
     gene            complement(5289..7190)
                     /locus_tag="RHX79_004163"
     CDS             complement(5289..7190)
                     /locus_tag="RHX79_004163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
                     /protein_id="HDV2199270.1"
                     /translation="MSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQ
                     FLSLEFAQVLDKMAYLTIWQGDEVQRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRA
                     GLRQNFRIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRM
                     AAEEGIFFYEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSA
                     QIRPSSVVTKDYTFKRPGWPGRFDQEGQYQDYQRTQYEVYDYPGRFKGAHGQNFARWQ
                     MDGWRNNAEVARGTSRSPEIWPGRRIVLTGHPQANLNREWQVVASELHGEQPQAVPGR
                     QGAGTALENHFAVIPADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKF
                     NWDRYNPADQDSSCWIRVAQAWAGTGFGHLAIPRVGQEVIVDFLNGDPDQPIIMGRTY
                     HQENRTPGSLPGTKTQMTIRSKTYMGSGFNELKFDDATGREQVYIHAQKNMDTEVLND
                     RTTTVKHDHRETVKNDQTVTIQEGNRLLTVEKGHKITGVLKGSLSEDVFQDRGTIAGS
                     VHVDAVNNGGEGDGIQAYTAIKEILLAVEESKIALTPDGIQLQVGESTVIRLSKDGIT
                     IVGGSVFIN"
BASE COUNT         1381 a         2232 c         1995 g         1807 t
ORIGIN      
        1 taactttccc acctttgctt tctatatatt ctcttacttt agggcttact ccatatttaa
       61 accaaaactg agcctctttc ccctgttctt cagccagctc aattgtcttc ttaatttgtg
      121 tccgagtaga cttacttaag aagttttttg gattatctat agagctataa gtcctcttga
      181 cctgcgctat gatcttgtca gtaacaacat catattcacg cccggcaatt tcttgagata
      241 taccaccaag ctttcttcgt acaagatcct cataatgaac atctaatgct tctcttactt
      301 ttccttgtct aaaaagatct cttgctttat ccgaaaggct tattttttct gcgggaacag
      361 aagtttttgc cagccccagc ggatcaatat accccagtgg attcggcaca taccggtaag
      421 tctgctcacc cccctgcaac cccagcgggt cactcaccag gtacattccg gtttccggct
      481 cgtaataccg gaaccggtta tagcacagcc cggattccgc atcctgccac tgtcccgcat
      541 acagcaggcc gggggcggct tccgggtcca gttccccgcg cgggtccggg tagtctgtgt
      601 ctgcgggcag actgagtgcc agcccccaca ggctggtctg ccccggtcgc cagacggttt
      661 taccttcact gttaaagagc atcagcggac ggcccgtcag gtcgctcacc gcataattcg
      721 ttcgcgtcac ccactgcggg gccacggacg gatgcggctg ccgtacccgg ctgaactgct
      781 ggcttatcag ctcaaagccg ttaaacacca ggtgccgtac gctgtacagt ttatcatcgc
      841 ggtattcccg gatttccgca atactgtcgc cgtcccacag atacgtgaag cggattttct
      901 tccggtcgca gcgtttctct gttcgtctgc cgctggcgtc gtggcggtat tcccacagct
      961 caccctgtgc gctgcaatac ccggtcagct ggtcccggct gtcccaccgg aaccgctctg
     1021 tttccgggcg gtagccgtca cggtgttttg tccggctgac catccggcct gcggcgtcat
     1081 agtcatactg cgtgtttccg gcctgtttca gccggtggcc tccggcatac tggtcagtct
     1141 cttcacttat ccggtgcctg cccgcagact gcgccttcag gtagccacaa ctgtcatagc
     1201 cataggactc atcgccttcg ccatagccca gcccggtgcc tgaggctgtc accgccgtga
     1261 cctgaccgtt ccggtccagc cggtattccc gccgtgtttc ccgtccgtaa tcttcccggc
     1321 tggtgacagc cgacacattg cccgcgctgt cgtaacggta ctcccgtacc agtgagggga
     1381 gcagcccgcc ccatgtggct tcttccggaa aaaatccggc gcgctgggtg acaagctggc
     1441 tggctgcatt ccagccctgc tcacaggcaa aaccccggtt actgtgccgg aacacttcac
     1501 gtcccgcctc atcacggctg aacgtcagcg tctcatcccc cggcagaatg acctccgtca
     1561 gttctccggc ggcgttataa cggtacgtgg ttttcagcag ggattcatcg gggtgtctgt
     1621 cgcgttcatc ttccggtggc aggatacagc ggataacggt gtgttcatcg gggtagtggt
     1681 attcaatggc ccgtcggccc tgagtggtga cattcaccca cccgcgttcg tcatagccgg
     1741 tgcgctgtga tgtaccgtcc gggctgaaga tacccgtcag cctgccggat ttgtcatagg
     1801 catactgcgt tttgccttcc ggcgtgatga cttctgccag gcggcctgcg gcgtcccggc
     1861 tgtagaggat ggtttcctcc agtccgttga ccctggcggt acagaggcca tcggcgtcat
     1921 agcggtaacg ccagaccacg ccgccccagt cacgctcttc cgtcacccgg ccacagttat
     1981 cgagaatata aagataagac tcgccctgcg ggttaatgac ttctgtcagt tgcagcgtgt
     2041 ctttatcgta gcgatactgc cagcggtggc cttcaccgtc cgttcgcgcc accggcaaat
     2101 cgaacggacc gtattccatc gtccagacaa caccgttgcc gtccgtccag gccagcaggt
     2161 tgccgtggcg gtcatagcgg aatccttccg cgccggtgcc agtgcgctca aggccgctca
     2221 gtttatggtg ctgctgccac tgcaaccgca ctgactgacc gccggggccg cgcatcttca
     2281 ccggcaggtc gtgaccgctg tattcggtgt ggtgttcacg gcccatcacg tcggtgagtg
     2341 tttccggccg gttgtggtgg tcgtactcta tgcccagacg ccgttcatcc tggcggaata
     2401 ttcccgacag cagcccctga gcggtgtatg ccagccgggt ctcttcgccc tgtggcgaca
     2461 ccaggcttac cggcaggccg cgttcatcac actgctgtgt ccacgtctgc ccggcagggt
     2521 cggtgatgtt gctgagcagg ccgcgctcat catagcggta ctgccactcc gcaccgtctg
     2581 ctgccgtgta acggcttagc tggccgtgtg cggcgttgta ttcaaatttc tccacccgcc
     2641 cggcagggga gtggcgggcc agcaggtgat ggaattcatc ccattcatac gtggtggtgc
     2701 tgccgtccgg cgcttcttcc cgcagaatat tgccgtcagg atcatagtaa taacggtgag
     2761 tgcccttgcc gtccgtcagg gtggtgcagc cgtcaccata gtccagcgtg gcgttgtaat
     2821 agccctccgc cccggtgacg gtcacgcacc ggccctgttc atcgtaggtg aaacggctcc
     2881 acgtctggtc gttatcggac cagcggatga tccggtccgc agcgtcgtac tcataaaaca
     2941 ggtggtagtc cagccgcgca tccgcttctg tcagccgccc ccgcgcatcc tgttcgtagg
     3001 tcgccagcgt ctgtatgccg ttatccgtac ggtgaatggc tttcaggtag ccgctggcat
     3061 ggtacgtcag tttaagccgg atcccgtcgg tgtgactgac acctgtgatc cggtactggc
     3121 tgtcgcgctc aaacgtgatg cggttgctgg cggtgtcgct catcccgccc agcatgtaca
     3181 tccggtctgc ggggctgtgt gccaggcggt catcgctggt atcgtcagtc accgggtggc
     3241 gcaggcgcat tcccggaaag gcgtcataaa agaagcggct gctcagggca tcacggtcga
     3301 acagctccag gtaatcatca cggcggcgca ggatgtactg ggcgtgatac gggttaaccg
     3361 ccgtatcact ttcaccgtcg aaggcgaagt tcagcgtggc tcccaggctg atgatatcca
     3421 cccgctttcc ctgttcacgc acccaggcgt attcgctcca ggaatcgctc cagcccacgc
     3481 cggtcaggcc atgcagtggc agtaccgaac agtggaagcg ggtgaaggag agggggagtg
     3541 tctggcccag ggtgaagtca gtacgttcgt cgcagtacgc gccggttacc gggtcaaccg
     3601 gatctttgat aaactttttc aggacgttat acgtattttt cagggcattt tttgttctgc
     3661 tcagcaatgc gccgagtttt gcacccagca gcttcccgct tttccccagc aggtttccca
     3721 gtttgcccag tttcgccaga ttccccagtt ttcccagcag tcctgctggc ggcagaagat
     3781 agctggctat cgttattcct cccaggatca ttctctgcca tggcgggaac tccggctgga
     3841 tatccagata ggtgacctgc tcacccccaa taaagacgtc cggcgaacct tccacgattg
     3901 ccgcgctgca ctccagtttg tcgcccttgc gcgcggcagg ctgattgttg ataaagacgt
     3961 tgctgctgcc ctgggctatc ctcggtggtt tgttctcctt gtcgcagagc gccgtgtcct
     4021 caccggcttc cgggaaatcc acgtcttttt tgatttcgcc acgcccgccc accatggtgg
     4081 caaactccat taataccgga ccggcgggaa acagaagcga tgtgcctgca cataagcgat
     4141 ccataaaacc ggcattgctg tccgtcaggg tgataacagc gttcccccag gccttcgcca
     4201 gtggtactgc tttttccgct gccgattcaa gcaggtcagt ggcaatatca ccccatgagg
     4261 gttccccctg tgggacttca ggtattgctc caggtggggg aggaggggga agggtgacgg
     4321 cggctctggc agcgggcttt ccgttaatgt ttacattttc agaaccggta ttgatggcgc
     4381 cgtccgtgtc acaaaagctg tttatccatg actcaagctg gttctgtttc tcctccacat
     4441 aatcactcgc cttatagctg gcatacatca gcgcaggcac cagaaccagc gcataagggc
     4501 cggtggcaca ggcggccata atcaggcaac cttctgcgat ggtcactatc gcccccagca
     4561 cggcccctgc cagtgccccc agaaaacttt tatgctgaat ttcatcgccc agcctggcgg
     4621 caggtgggcc ggacttcttt gctgccagca tctgtgcaat ggctttgtcg ttggctgccc
     4681 gtttcatctg gctggcgacc atcgcctgct gtgacagcat tcgcattgcc agcgtaccgc
     4741 ctgcggtcgc tccctgtggc ccgcctggtc cttcactcat gtgttatccc tcgtttatgt
     4801 cagcgcggct ggtccttttg gatgtcattc tccggtggca acggggtgaa gctctttatc
     4861 acctccagca gcatcgtctt ttgactgttc ttcagggata aggaggtgct gaaagtgaag
     4921 gtcagcagcg tatctccacg ccgctggaat acggctatct ggctaatccg cccctgattc
     4981 ccctcatctt ccggaccgtt ccaggaataa tccagcagcc aggccggggc ctctgccaga
     5041 gtgatttccc ggcaggcatg ttcggtgtac ccatcaagtt tgccctggta cagcgccagc
     5101 gtttcctggt acagctctgg tgtcagggtt ccctgtggaa cggcttcgcg ggtaatgacc
     5161 aggttgatgc cactgttatc tgtggacacc aggacctgca ttgactgatc ctgccattga
     5221 gacggcagtt gaatgtggcc ttcattaaaa gtgaactgca taaaatactc cctgataatc
     5281 tgagtgaatc agttgatgaa aacagaaccg cccacgatgg tgatgccatc cttcgacagc
     5341 ctgattaccg tcgattcgcc gacctgtagc tgaatgccat ccggcgtcag cgcaattttg
     5401 ctttcctcca cggccagcaa aatttcctta atcgccgtat aagcctgtat accgtcgcct
     5461 tcgccaccat tgtttacagc gtcaacatgc accgaaccgg caatcgtgcc tctgtcctga
     5521 aagacatcct cagataaaga ccctttcagt actccggtga ttttgtggcc tttttccacc
     5581 gtaagaaggc ggttaccttc ctggatcgtg accgtctggt cattttttac ggtttcgcga
     5641 tgatcgtgtt ttacggtggt ggtacggtcg ttgagcactt cggtatccat gttcttctgc
     5701 gcgtggatgt agacctgttc tctccctgtc gcatcatcaa acttcagctc attaaatccg
     5761 ctgcccatgt acgttttgga gcggatggtc atctgcgtct ttgttcccgg caggctgccg
     5821 ggggtgcggt tttcctggtg gtaggtgcgc cccataatga tcggctggtc cggatcgccg
     5881 ttgaggaagt ctacaatcac ctcctgaccc acacgcggta tcgccaggtg gccaaaaccg
     5941 gtgcctgccc acgcctgtgc cacacggatc cagcacgaac tgtcttggtc tgccgggtta
     6001 taacggtccc agttgaactt cacccgcacg cgaccatgtt cgtcgcagaa gatttcctcg
     6061 cctgccggtc ctgtcacgac agcgctctgc gggccgtcga ccagcggttt cagcaacggc
     6121 tgtggtcgcc atgttctgtc tgccgggatc accgcaaaat ggttctccag cgccgtcccc
     6181 gctccctgcc gtcctggcac cgcctgtggc tgttcgccgt gcagttcact tgccaccacc
     6241 tgccattccc ggttcaggtt cgcctgcgga tgccccgtca gcacaattcg ccgtcccggc
     6301 catatctccg gcgaacggct tgttccgcgc gccacttctg cgttgtttcg ccagccgtcc
     6361 atctgccagc gggcaaagtt ctgcccgtgg gcacccttga aacgtccggg gtagtcatac
     6421 acttcatact gcgtgcgctg gtaatcctgg tactggcctt cctgatcaaa acgccctggc
     6481 cagccgggtc gtttaaaggt gtagtccttg gtcaccacgg aagaagggcg gatttgtgcg
     6541 ctgtagcgga actggctgat gcagagggtg ctcacctcgg tacgggtgtt cgggttccat
     6601 gggatttcaa aagattcggg cagatggcgg actgtgtcgc acagcaccag gctctggtcg
     6661 gtacttttgt aagcatgctc ctcataaaag aagatgcctt cctccgccgc catccggcac
     6721 aggaaatcgt aatcagtctc accgtactgg acacaaaact cacgggaagg atgcggctcg
     6781 ctgaacagcg gactccattc ggtcaccccg ttttcctgca acatcgtgcc gaggatgctt
     6841 ttgatgtcct cgttctggaa gatacggaag ttctggcgca gaccggcacg ccacagcggc
     6901 gggtgcacct tcatgctgta cagcatctgg tttttgtcgt tctccccgag ttcaaaccag
     6961 gtcaccacgc ctttcacccg gcgctgtact tcatcgccct gccatatcgt caggtaggcc
     7021 attttgtcca gcacctgcgc aaattcaagg gagagaaact gctggctgac cagggagaga
     7081 tcgagggaaa agagcgaaga gagtgactgg ttcagatgaa aggaaaccac cgcaaaagca
     7141 tccggcggca ggccgtccac ttccagtgtg aaacgtaatc cggttgacat agcaacctcc
     7201 ggtaaaatga ataatgatcc gtaccgtaca actgcggata atgtgataag cgggacgact
     7261 tcagacgtta ttagggaagg aacagaaaat gctatggtta tgtgagaatt ttgtttaaat
     7321 attactttac agaaacgggt gtctgttcag tcaaaaaaat aatcacaagc tcaacctctt
     7381 gtttcttggc gttattcagg acaggtacgc atatc
//
LOCUS       DAPGWB010000197         7362 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.199, whole genome shotgun sequence.
ACCESSION   DAPGWB010000197 DAPGWB010000000
VERSION     DAPGWB010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7362)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7362)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7362
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.199"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(69..548)
                     /gene="folK"
                     /locus_tag="RHX79_004164"
     CDS             complement(69..548)
                     /gene="folK"
                     /locus_tag="RHX79_004164"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDV2199271.1"
                     /translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILAVSSFYRTP
                     PLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLF
                     GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELAFPDGETLREVLHTRAFDKLSKW"
     gene            complement(545..1963)
                     /gene="pcnB"
                     /locus_tag="RHX79_004165"
     CDS             complement(545..1963)
                     /gene="pcnB"
                     /locus_tag="RHX79_004165"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000174652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HDV2199272.1"
                     /translation="MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQH
                     AISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKL
                     FRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGS
                     IEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLR
                     AVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYDTYKLLCEY
                     HLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLL
                     ETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG
                     KRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDE
                     EPSPRRRTRRPRKRAPRREGTA"
     gene            complement(2002..2928)
                     /gene="gluQRS"
                     /locus_tag="RHX79_004166"
     CDS             complement(2002..2928)
                     /gene="gluQRS"
                     /locus_tag="RHX79_004166"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001432381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HDV2199273.1"
                     /translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR
                     ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL
                     HEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII
                     HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF
                     GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQAEAHWQDFS
                     VEQILQSAVKNWRLTAVPESAIVNSTFSNASC"
     gene            complement(2965..3420)
                     /gene="dksA"
                     /locus_tag="RHX79_004167"
     CDS             complement(2965..3420)
                     /gene="dksA"
                     /locus_tag="RHX79_004167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002209354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HDV2199274.1"
                     /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL
                     EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT
                     LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG"
     gene            complement(3598..4302)
                     /gene="sfsA"
                     /locus_tag="RHX79_004168"
     CDS             complement(3598..4302)
                     /gene="sfsA"
                     /locus_tag="RHX79_004168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HDV2199275.1"
                     /translation="MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC
                     ATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS
                     GYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH
                     LRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE
                     ISAEGMALKKSLPVTL"
     gene            complement(4317..4847)
                     /gene="thpR"
                     /locus_tag="RHX79_004169"
     CDS             complement(4317..4847)
                     /gene="thpR"
                     /locus_tag="RHX79_004169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HDV2199276.1"
                     /translation="MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHL
                     TLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQL
                     ANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFA
                     RGRTRYTPLKRWALTQ"
     gene            4921..7350
                     /gene="hrpB"
                     /locus_tag="RHX79_004170"
     CDS             4921..7350
                     /gene="hrpB"
                     /locus_tag="RHX79_004170"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HDV2199277.1"
                     /translation="MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAH
                     PGINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEG
                     VLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLD
                     NDRLQQMLPEAPVVISEGRSFPVERRYLPLPTHQRFDEAVAVATAEMLRQESGSLLLF
                     LPGVGEVQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAE
                     TSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGICLH
                     LIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRL
                     LQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMG
                     NSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDG
                     RYQLANGMGAMLDANDALSRHEWLIAPLLLQGSASPDARILLALPVDIDELVQRCPQL
                     VQQSDTVEWDDAQGTLKAWRRLQIGLLTVKVQPLAKPSEDELHQAMLNGIRDKDLSVL
                     NWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLATLETWLLPHMTGVHSLRGLKSLD
                     IYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATN
                     PTIAQGRVPLVLELLSPAQRPLQITRDLSAFWKGAYREVQKEMKGRYPKHVWPDDPAN
                     TAPTRRTKKYS"
BASE COUNT         1684 a         1905 c         2058 g         1715 t
ORIGIN      
        1 aaatttttat taaggaaaga gaggatgtat gattttcaga aaatatttat attcgtaata
       61 taaataaatt accatttgct taatttgtca aatgctcttg tatgtaagac ttcacgcaac
      121 gtctccccat caggaaacgc cagctccggt gcaatctcaa acagcggcca cagcataaat
      181 ccacgattct tcatatcgta gtgcggaacg gtcaggcgtt cggtatttat cacttcatta
      241 ccaaacagca tgatatcgag atccagcgtg cgtggtcccc agcgttcagc tttacgaaca
      301 cgaccctgtt gcagttctat gcgctgtgta tggttgagta actcttccgg ggcgagcgaa
      361 gtttcaagcg ccacggcggc gttgaggtaa tcgggttgat cttgcggccc cagcggtggg
      421 gtgcggtaaa acgaagaaac ggcaagaatg tggctttcag ggatatcgcc taatgctttc
      481 agggcagcat tgacctgctc cagcggagag gccagattgc tgcctatggc aatatacgcc
      541 actgtcatgc ggtaccctca cgacgcggtg cgcgtttgcg tggacgacga gtacgacgac
      601 gcggtgacgg ttcttcatcc agctcgttaa gcatcccttt ttgatctggt ggtgcggaaa
      661 cctggaactc accccaccat ttcaccagac gctgcagttc agcattacgt tcaacttcag
      721 ctcgcaaggc caacaggtca taagccgcac ggaacttagg atgctccagc agtttccatg
      781 cgcgtttacc ctgacgacgg gacatacgca actgcaactg ccagatatcg cgggttaacg
      841 tcgtcagacg tttcgggatt gccagtgaac ggcaggcttc gtccagcacg tcgttcatcg
      901 ccagcgcgaa agcgtcgtga taggtcaggc cgctttcctg ggcaatcttc tgtgccgtct
      961 ccagcagtgg gtaccagaac atggcggcaa acaggaacgc cgggttcacg cgcatatcgt
     1021 tatggatacg cgtatcggta ttcttcagca cctgttcaat gatccgctcc atcgggctgt
     1081 cgccattttc cgtgaagtag cgggtaatgg tcgggaacag cggctggaac agatgatatt
     1141 cacacaacag cttataggta tcgtaaccgt agcccgcttg tagcagttta agcgattctt
     1201 caaacaggcg tgccggtggg atatcgttca acagggtagc gaggcgaggg atcggttctg
     1261 cggtttccgg gctgatgcgc atacccaatt tggcggcaaa acgtaccgcg cgcagcatac
     1321 gtaccggatc ttcacggtag cgcgtttccg ggttaccaat cagacggata acgccgtcct
     1381 tcagatcctt cataccgcca acgtaatcac ggacggtaaa atccgctacg ctgtaataga
     1441 ggctgttgat agtgaaatcg cggcgctggg cgtcttcttc gatggagccg aaaatgttgt
     1501 cgcgcagcaa catgccgttt tgcccgcgtt gggaggtcgt gcggtcgctg acgttacctt
     1561 cgtggtgtcc acggaaggtc gcaacttcga taatctccgg gccaaacatt acatgagcca
     1621 gacggaaacg gcgacccacc aggcggcagt tacggaacag tttgcgcacc tgctcaggcg
     1681 tggcgttagt ggttacgtca aaatctttcg gctttttgcc aagtaacagg tcgcgcacgc
     1741 cgccgccaac cagccaggct tcgtatcccg ctttgttgag cctgtacatt accttcaggg
     1801 cattttcact gatatctttg cgggaaatag catgctgctc acgcgggatc accgtcacct
     1861 gtggacgggc gactgcctgt tcagcctcgc tttcctcgcg gcttagcacc ttgcggcaaa
     1921 aattagcgac tcgggtaaaa atagtacacc tcggtagtgt caaacatcat tcaggacaaa
     1981 aaaatagcgg ctaatcatag ctcagcatga cgcatttgag aatgttgaat ttacaattgc
     2041 cgactcgggc acggcggtaa gccgccagtt tttgacggct gactgaagga tttgctcgac
     2101 gctgaaatcc tgccagtgtg cttctgcctg ctgccccaga aattgaagtg ccgcgattag
     2161 taccgggcgt ggatcgcctt tcggcaacgc aggcgcatga ttctgcttgg aaagtttagc
     2221 gccttgtgga ttaagcgcca gcggcagatg aatgtaatct ggcactttcc agccaaaaag
     2281 ctggtacagc gagatttgcc ttactgttgg ttcaatcaga tcagccccac gcactatttc
     2341 tgtaacgccc tggaaatgat catcaaccac aacagccagg ttgtaggcga acaacccatc
     2401 acggcgatga atgataaaat cttcccgtgc cagtttttcg tcggcgtgaa taatgccgcg
     2461 cagctggtca gtaaattgcg tgaccggatg ctgctggcgg atacgcactg cggcattgtc
     2521 tggtccatga tgcaacaccc ggcaatgacc gtcgtaaata ccgccaatgc tttgaatacg
     2581 cgcacgcgta caggtgcagt aataacttag tccttgttca tgtaaccagg cgagtgcttc
     2641 acgataggcg tcgtgacgtt gcgattgcca gagaacatcg ccgtcccagt gcagaccgta
     2701 atgttccagc tggcgcagga tagtttctgc ggcaccggga acttcacgag gcgggtcgat
     2761 atcttctatg cgtaccagcc agcgaccttg ccgggcgcga gcctgcaaat agctgccgag
     2821 cgcggcgatc agagagccaa aatgaagctc gccggaagga gagggggcga agcggccaat
     2881 atactgtgtg tctgtcatct ctttgaacaa aaaataaggc gggagcattt cccgcctgtg
     2941 gtaaacgtga tggaacggct gtaattagcc agccatctgt ttttcgcgaa tttcagccag
     3001 cgttttgcag tcgatgcaca gatcggctgt cgggcgcgct tccagacggc gaataccaat
     3061 ttcaacaccg caggattcgc agtagccgaa atcttcgtct tccacttttt tcagcgtctt
     3121 ctcgatcttt ttgatcagct tacgctcgcg atcgcggtta cgcagttcga ggctgaactc
     3181 ttcttcctgg gctgcacggt ctaccgggtc cgggaagttg gctgcttcat cctgcatatg
     3241 tgtaacggtg cgatcgactt catccctgag ttgattacgc catgcttcca gaatacgacg
     3301 gaagtgcgcc agctgggctt cattcatata ctcttcgccc ggcttctcct gatatggttc
     3361 caccccagcg atggcgagaa tactcaggga cgatgtttta cggttttgcc cttcttgcat
     3421 gttgcttctc cttaacacgc actatcgatc cccatgttcg ggggaaaaat gaggccgcta
     3481 taaatagcag atgcttttcc ggatagcaat tatctaaacg taacacttga caactgtgtg
     3541 aggaaaagcg tatttgcgca cgcgaccaga atgtaaatta accagttact tactttacta
     3601 caatgtaacc ggcagtgatt ttttaagagc catgccttca gcagaaattt ccgctttgta
     3661 agccagaatt tctacccccc tctgttgagc ttctgacaat agttgcgcgt atttctcatc
     3721 gatgtggcgc gcgggtgaaa accgtgtaat ggctgaatgc agcacggcga aaaagataac
     3781 cgcacgctgg ccttcagccg ctacgctcat caactcccga aggtgtttct gacctcgttc
     3841 agtgaccgca tcgggaaaat atccctgttc gttctccgct aacgtaaccg atttcacttc
     3901 aatatagcag tctggacgcg aatccgcctg caacataaag tcaatacggc tgcgttctgc
     3961 gccgtatttt acttcgcttt tcagcgagct atagcctgac agttctgaaa ttgattcatt
     4021 aaggatagcc tctttcgtca acctgttagc ccaaagcgtg ttgacgcaaa taaatgcgcc
     4081 gctctggctt tgagttaatt cccaggtgtg tgggtatttc cgtttggtgt tgtctgaagt
     4141 cgaataccag acggtatcgc caggcgttgc acaaccggtc attgcacccg tattcgggca
     4201 gtgtagcgtt aattcgcgac catcgggtgt gatcacatcg gctaaaaaac gtttgtaacg
     4261 ctgaattagc gtcgcgcgct gtagaggggg agaaaattcc attgcgacaa tccttgttat
     4321 tgcgttagcg cccagcgttt tagcggcgtg tagcgtgtgc gtccacgggc aaacgaggag
     4381 gcgtaaaggg tgaactccgt caccgcatac gaccagttaa aacctggcgg cgggattgtc
     4441 accgcctcgc tggcgtcgcg caataaggta atatgtggat gaaacggacg attgctttga
     4501 aaacaaccgc tgcgggcagc ctgtgaacgg agcatattcg ccagctggat taagccgcgt
     4561 ggcggctgac gcatccctaa ccacaccaca cgcgaacgca gccattgtcc ggcgtcatca
     4621 agcgtgagtg tgaaaccagg ttgacgaatc cgtccggcta aaagagaaag cgccttctct
     4681 ttctcggcgc tcacttcgcc taaaaatgcc agagtcagat gcaaattatc ggcggcgacc
     4741 ggacgtcccg cctcaggtgg gaagtgtgtg gcgcgccagt ggataatctg ttcgcggatt
     4801 tctgcaggta agtcgatagc aaagaacaga cgttgcggtt cagacatgtg aggcactcgg
     4861 ttatgaatta ccgcgatgct acaatgtggc gcgaagaatg ttaaccctct ggagcgtttt
     4921 gtgtcgtcgt tgcccgttgc tgccgtctta cctgaattac ttaccgctct cgattgtgcg
     4981 ccgcaggtat tattaagtgc gccgaccggg gccgggaaat caacctggct gccgctgcaa
     5041 ctgctggcgc atcccggcat taacgggaaa attatcctgc tggagccgcg tcgtctggcg
     5101 gcgcgtaacg tcgcgcaacg gctggcggag ctgcttaacg aaaagccagg cgataccgtt
     5161 ggctaccgga tgcgtgcgca aaactgcgtc gggccgaata cccgcctgga agtagttacc
     5221 gaaggcgtgc tgacgcggat gatccagcgt gacccggagt tgagcggtgt tggattggtg
     5281 atcctcgatg agtttcatga gcgcagcttg caggcggatt tggcgttggc gctgttactc
     5341 gatgtgcaac aaggtctgcg tgatgacctt aaactgctga ttatgtcggc tacgctggac
     5401 aacgaccgct tgcagcaaat gctgccagaa gcgcccgtcg tcatctcaga agggcgctcg
     5461 tttccggttg aacgccgtta tttaccactg cccacgcatc agcgttttga cgaagccgtt
     5521 gcggtagcca ccgctgaaat gctgcgtcag gaaagtggat cattactgtt atttttacct
     5581 ggcgtcggag aagttcagcg tgtgcaggaa caactggctt cgcgcatcgg cagcgatgta
     5641 ttgctctgcc cgctgtatgg cgcgttgtcg ctgaacgatc agcgaaaagc gatcctcccg
     5701 gcaccgcaag ggatgcgcaa agtggtgctg gcgaccaata ttgctgaaac cagtttaacc
     5761 atcgaaggta ttcgtctggt ggtggattgt gcccaggagc gtgtggcgcg ttttgatccg
     5821 cgcacggggc ttacgcgact gattactcaa cgcgttagcc aggcatccat gacgcagcgt
     5881 gccgggcgcg ccgggcgtct ggagccgggt atctgcctgc atttaatcgc caaggaacaa
     5941 gcagaacgcg ccgcggcgca aagtgaaccg gagatattac aaagcgatct ttccggtttg
     6001 ctgatggaat tactgcaatg gggatgcagc gatccggcgc agatgagctg gctggatcaa
     6061 ccgccagtag tgaatctact ggccgcgaaa cgtctgttac aaatgctggg ggcactggag
     6121 ggtgaacggc ttagtgcgca agggcaaaaa atggcagcgc tgggtaacga tccgcgttta
     6181 gcggcaatgc tggttagcgc gaagaacgac gacgaagctg ctaccgcggc aaaaattgcc
     6241 gccattctcg aagagccgcc acggatgggc aatagtgacc tgggcgtggc gttttcgcgc
     6301 aatcaaccag cctggcagca acgtagtcag caactgttaa aacgcttaaa cgtacgtggc
     6361 ggtgaggcag acagttcgct tatcgcgccg ctacttgccg gggcgtttgc cgatcgcatt
     6421 gctcgtcgcc gtgggcaaga tggacgctat caactggcaa acggcatggg agcgatgctc
     6481 gatgccaacg acgcgctaag ccgccacgaa tggttgatcg caccgttatt attgcagggc
     6541 agcgcctcgc cggatgcgcg gattttactg gcgctgccgg tcgatattga tgagttagta
     6601 caacgctgcc cgcagctggt acagcagtct gacactgtgg agtgggatga cgcgcaaggt
     6661 acgctgaaag cctggcgtcg gctgcaaatc ggtctgctga cggtgaaagt gcagccgctg
     6721 gcgaaaccct cggaagacga gttgcatcag gcgatgctta atggcatccg cgataaagat
     6781 ttaagcgtgc tcaactggac ggcggaagcg gaacagctac gcttgcgttt gttatgcgcc
     6841 gcaaagtggt tgccggaata tgactggcca gcggttgatg atgaaagttt attggcgacg
     6901 ctggaaacgt ggctgctgcc acatatgact ggcgtacatt cactacgcgg cctgaaatca
     6961 ctcgacattt atcaggcact acgcggatta cttgattggg gaatgcagca acgtctggat
     7021 agtgaattgc ctgcgcatta cactgtgccg acgggaagcc ggatcgccat tcgttatcat
     7081 gaagataacc cgcccgcgct ggcggtgaga atgcaagaga tgtttggcga ggccaccaat
     7141 ccgacgatcg cccaggggcg cgtgccgctg gtgctggagt tgctttcacc tgcccaaagg
     7201 ccattacaaa tcacacgaga tttgagcgcc ttctggaaag gagcgtaccg tgaggtgcaa
     7261 aaagagatga aagggcgtta tcccaaacat gtctggccgg acgacccggc aaatactgca
     7321 ccgacgcgac ggacgaaaaa gtattcgtaa ggttggtttt ct
//
LOCUS       DAPGWB010000198         7345 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.200, whole genome shotgun sequence.
ACCESSION   DAPGWB010000198 DAPGWB010000000
VERSION     DAPGWB010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7345
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.200"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            210..452
                     /locus_tag="RHX79_004171"
     CDS             210..452
                     /locus_tag="RHX79_004171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709694.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199278.1"
                     /translation="MNSLAGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVD
                     QYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW"
     gene            complement(782..1711)
                     /gene="fdhE"
                     /locus_tag="RHX79_004172"
     CDS             complement(782..1711)
                     /gene="fdhE"
                     /locus_tag="RHX79_004172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HDV2199279.1"
                     /translation="MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLREL
                     AENNPLGDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKH
                     WQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFI
                     WAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLC
                     ETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAV
                     ADDLASLVLDARMEQEGYARSSINPFLFPGEGE"
     gene            complement(1708..2343)
                     /gene="fdoI"
                     /locus_tag="RHX79_004173"
     CDS             complement(1708..2343)
                     /gene="fdoI"
                     /locus_tag="RHX79_004173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HDV2199280.1"
                     /translation="MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLM
                     QIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVG
                     DTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVAL
                     IVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE"
     gene            complement(2340..3242)
                     /gene="fdoH"
                     /locus_tag="RHX79_004174"
     CDS             complement(2340..3242)
                     /gene="fdoH"
                     /locus_tag="RHX79_004174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase O subunit beta"
                     /protein_id="HDV2199281.1"
                     /translation="MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKA
                     CQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMH
                     CSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKC
                     TLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAG
                     VGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHY
                     VGVGPNRADEEENNLHEEKDEERK"
     gene            complement(3255..6305)
                     /gene="fdnG"
                     /locus_tag="RHX79_004175"
     CDS             complement(3255..6305)
                     /gene="fdnG"
                     /locus_tag="RHX79_004175"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(5718..5720),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HDV2199282.1"
                     /translation="MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTR
                     ETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFI
                     HSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLS
                     TGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIR
                     SGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYD
                     KSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCE
                     YIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSM
                     MKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNK
                     NKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENG
                     SIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNY
                     AIPHEPKSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIF
                     AGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQL
                     LKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFET
                     PLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAI
                     LQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIG
                     IPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV"
     gene            6499..7332
                     /gene="fdhD"
                     /locus_tag="RHX79_004176"
     CDS             6499..7332
                     /gene="fdhD"
                     /locus_tag="RHX79_004176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDV2199283.1"
                     /translation="MKKTQQKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVA
                     LVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSS
                     RRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDF
                     QPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSS
                     RASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLS
                     N"
BASE COUNT         1658 a         1939 c         1970 g         1778 t
ORIGIN      
        1 ttcattcttg aatataaaaa aacagatgcc cttattctgg tattaataca aggctgtttt
       61 acttgaactt ataataactg caactgttac atcgtatctg gaaaacgcct cgcaaaaata
      121 aaaaatgatg cgtaaatgag ctttctttaa agattcggca agggtacttt tctctccata
      181 gattcaaaaa tgatattggc gagatattta tgaactctct ggcaggtata gatatgggca
      241 gaattttact cgatttatcg aatgaggtga ttaagcaact tgatgatctc gaggtgcagc
      301 gtaatcttcc tcgtgcggac ctattaaggg aagcggtaga tcaatacctg ataaatcaat
      361 cgcaaacagc aagaaccagt gttcctggca tctggcaagg gtgtgaggaa gatggtgtcg
      421 aatatcagcg taagctgcgc gaggaatggt aatgggaaaa aatgatgtca atcagattgc
      481 tgacaacgtg cgcgttgttc atgccggatg cggcgtgagc gccttatccg gcctacaaag
      541 tcatgcaaat tcaatatatt gaagtttatt ggtagggctg ataagcgcag cgcatcaggc
      601 aatcatacgc ttgtcatcag tgacataccc ataaccttat cgatgtgttg gagggaagaa
      661 cgaggcaaac agacaattgc ggcatgatct tgaatgggta acgcggaata cgagagatgg
      721 tgtcgtcaca ccctatgagc tgtaatccgg gcgaccagcg ccacccggaa aacgtcagag
      781 attactcccc ttcacccgga aacaggaacg ggttgatgga actgcgggca tagccttctt
      841 gctccattcg cgcgtccagt accagagaag cgaggtcatc tgccacggct tcaactttcg
      901 gttctttttc ctgataaaga atcttcaggt aagtgccaca gtcatcgcag ctttcggctt
      961 taatcgcggc ctgttcgtca tccagcgacc agtaatgcag tttgccgctc tgctcgcagt
     1021 tgctgcattt tacgcgcact acgtgccatt cggtttcaca caggttgcag tgcaggtaac
     1081 gcagaccctg agtggtgcca atttgcacca tgctggacac cggcatagaa ccacaaaccg
     1141 ggcaatattg acgttgctcg ccgtattcag cgcgggcttt gccggggatc agattggcca
     1201 tctgcgccca gtagagcgac agtgcagccc agataaacgg cgctttatcg ctgctgacgg
     1261 atgagaaatc agaggcaaac agtgcgctgg ccatatcttc cagctcctga gttgatgcct
     1321 tctccagatt ctcaatcact gccagcgccg ggccgctcat ttcaggtttc agctcagcaa
     1381 tcagcgccat cagcagcttt tgccagtgct tatcacgcgg cagaacgtga atatccagcg
     1441 ggggcttgcc ctgtgcgctg gcttctttaa tgcgcgcggt cagatccatc tccagcggat
     1501 ggtcgtacag caccacttcc tgggcgtggg cgataagcgc agcaaagcgc aggtaatcac
     1561 ccagcggatt attttctgcc agctcgcgca gacgctcggc gcggcggttg tataaattct
     1621 tgagccgagg gaacaataac ggcggaatca tatccgccgt acgtttctcg ctcgaaccca
     1681 gctcatcttg cgggattatg cgaatactca ttcagctttc ttttccgttg tcttgcggac
     1741 ctcacggtac cagcgcgggt gatgtttctt cgcccaggcg ctggtaaccc atccttccac
     1801 catggcggta atcgtgcctt tcacccaaag ggcggcgtag atatgcacca tgataaccac
     1861 aattaacgcc actgcggcaa atgaatgcag cattaacgcg aatcggatca ccgggattga
     1921 gaaagcaggc gcaaaataag gacgccagat aatcacgccg ctcaccagca gcagaaccag
     1981 gaaaataatc gccgcccaga aaacgcattt ctgaccgaag ttataacgcc cggtgtcacc
     2041 tacttcctcg ttgacgacga tcttacgaat attcttcgcc caaaagatat catcccgatt
     2101 gattaggttg tgatgccagt aacggaaaaa catgatgatg aacgaggcaa acataaccac
     2161 gccgacaaac gggtgcagaa ttcgcgccag ctgcggtgtg cccatgattt gcatcaacca
     2221 gttgaaggac gggaacaaaa agcccagccc gctcactgcc gccaggatga agcagaaggc
     2281 ggtgatccag tggttgatac gttccggcgc ggtgtagcgc acgatggtgt cacgtcgttt
     2341 catttgcgct cctcgtcttt ctcttcgtgc agattattct cttcctcatc cgcacggttc
     2401 ggaccgacac ccacgtagtg gaagatactg gctgcgaagg tagccgcaaa gccaacagct
     2461 gcgagcggtt tccagatgcc tttccagaat ttcacggttt cgctgatttc cgggttctcc
     2521 ggcaagccat gatacagatt tggcttgtca gcatggtgca gcacgtacat aacgtgtgta
     2581 ccaccgacgc ctgccggatc gtacaggccc gcattgtcgt aaccgcgggt tttcagctcc
     2641 gccacgcgct cgctcgccag cgttttcatc gactctttcg taccgaagtg aatcgcgccc
     2701 gttgggcagg tcttcacgca ggctggttct tgcccaacca ccacgcggtc aacgcacagc
     2761 gtacatttgt agacgcggtt gtcttccggg ttgaggcgcg gaatgtcgaa cggacagccc
     2821 gcaatgcaat aaccgcagcc aatgcactgc tcggactgga agtcgacgat accgttggca
     2881 tactgaataa ttgcaccttc cgccgggcac gctttcaggc agcctggatc ggaacagtgc
     2941 atacagccgt ctttgcggat cagccattcc agtttgtcgt tctgctccac ttccgagaag
     3001 cgcattaccg tccacgattt ggcgcttaaa tcattggggt tgtcgtacac cccaatgtta
     3061 ttgccgacgg tatcgcgaat gtcgttccac tctgaacacg ccacctgaca ggctttacag
     3121 ccgatacagg tggtgacgtc gatgagtttc gccacttctt cctggaagtc ccgcgcctga
     3181 ggcgcggggg tcagaccgtt agtcgcggaa cgacgaatga tatcttgaga ttgataagcc
     3241 atatgtcgtc tccgttacac cttttccaca ttcacaagga aggacttaaa ctccggcgtc
     3301 tgcgtgttcg catcaccaac gaatggcgtt aacgtattgg caataaagcc ttttttagct
     3361 acgccttcat agccccagtg aatcggaata ccgatggtat cgatatcttt gccgttcgct
     3421 ttcagtgtac gaatacgttt ggtcaccacc gctttggcct tgatatagcc acggttggag
     3481 gagactttca cggtatcgcc ctgggcaatg ccaagtttat tcgccagcga ctccccgatt
     3541 tccacaaact gctctggttg caaaatcgcg ttcaacagcg cgtgtttggt ccagtagtgg
     3601 aagtgctcgg tcagacgata ggtggttccg acatacggga acttatcggc tttacccaat
     3661 gcttcggcgt cgtctttaaa gatacgtgca gccgggttcg agataacgtt tggatgcagc
     3721 gggttagttc ccagcggcgt ttcaaacggc tcgtagtgtt ccgggaacgg accttccgcc
     3781 atcttatcga gggcaaacag acgccccatg ccttcctgct gcatgataaa cggcccgacg
     3841 ccgctacccg gaggcgctgc gctgtagtcc ggaatatccc agccggtcca cttagtgccg
     3901 tcccatttca gcaactgacg cttcggatcc cacgggttac cctgcggatc tgcggaggcg
     3961 cggttataca gaatgcggcg gttaagcggc catgcccatg cccagcccag cgtgttaccg
     4021 aggccagacg gatcggcgtt atcacgacgc gccatctggt tgccttccgg cgtccagcta
     4081 ccggcgaaaa tccagcagcc acaggaggtt gtaccgtcat cgcgcaattg ggcgaacgag
     4141 ctaagttgtt ggcctttctt gacgataacc gcaccggttg ccggatcggt aatatcggcc
     4201 agcgccttac cgttgctctc catcgctact tcttccgact tcggctcatg cggaatggcg
     4261 tagttccagg tcatgttcag cacctgatcc ggattcgcgc caccctgttc ggcatacatc
     4321 ttgcgcaagc gcaggaagat accggagagg atctcaccgt cagtcagcgc aatccccggg
     4381 gcgtccgcac ctttccagtg ccactgcaac cagcgacctg agttaacgat tgaaccgttc
     4441 tcttctgcga agcaggtcga tggcagacgg aacacttcgg tctggatctt cgacgagtca
     4501 acttcgttca gctcaccgtg gttctgccag aagttagagg tttcagtgtt cagcgggtcg
     4561 atggtgacga ggaacttcag tttcgacaga caaccgatca ctttgttttt gttcgggaat
     4621 gaggcaacag ggttaaagcc ctggcagata tagccattga ccttgccttc tttcatcatc
     4681 tcgaagtatt gcaggacgtc gtagccttta tcccacttcg gcaaccagtc aaagccccag
     4741 ctattttccg ccgtcgcttt atcaccaaag aaggccttca tcatagagac gaagaatttc
     4801 gggtagttgc cccagtagtt tacctggcct tccagcagcg gttttggcgt gttggcggta
     4861 aggtaggttt gcagatcggt ctgcttctcg cttggcagcg tcatgtaacc tggcagactc
     4921 tgcgacagta gccccaggtc cgtcagcccc tgaatattgg agtgaccgcg cagggcgtta
     4981 acgccgccgc cggccatccc catattgccg agcagcagct ggatcatcgc catcgtacga
     5041 atgttttgcg caccaacgga gtgttgcgtc cagccgaggg catacaggaa cgaggcagtt
     5101 ttatcgtgag cactggtttc tgcgatgtat tcgcagactt tcaggaacgc gtcttttggc
     5161 gtaccacaga tgttttcaac cacatctggc gtgtagcggg aaacgtgctg tttcagcaag
     5221 ttccacacgc agcgcggatg ttgcagcgtg gtatcgcgtt tggcgaagcc gttttcgtcc
     5281 agttcgtaag tccaggagga tttatcgtac ttgcgttttt ccgcgtcata gccggtgaac
     5341 aggccatctt caaagccgta atcctcacgc acgatcaggc tggcgttggt ataggcttcg
     5401 gtgtattcgc ggttgaattt ttcattgttc agcaggtaca gcaatacgcc tgacaggaaa
     5461 gcaatgtcag taccggaacg aataggggca tagtagtcag ccaccgccgc cgtacgcgta
     5521 aagcgaggat cgatcacaat cagcttcgcg ccattgtgaa ttttggcttc catcgcccag
     5581 cggaacccga ccgggtgagc ttcagcggcg ttaccgccca tcaccacgac gaggttggcg
     5641 ttcttgatgt cgacccagtg gttggtcatc gcaccgcgac caaatgttgg agcaagactt
     5701 gctaccgttg gtccgtgtca gacacgcgcc tggttgtcga ccgcgagcat acccagcgcg
     5761 cgggagaatt tttgcgttaa atagccggtt tcgttactcg acgcggaagc acacagcatc
     5821 ccggtggaga gccagcggtt aacagtcacg ccttcggcgt tttgcgcaat gtagttagca
     5881 tcgcggtctt ctttcatcag tttggcgatg cgatcaaacg cctcttccca actgatttgc
     5941 tgccatttat cagaacctgg cgcacggtat tccggaaact tcagacggct ttcggagtgg
     6001 atgaaatcca ccaggccagc gcctttcgga caaagtgcac cgcggttgac cgggtgatcc
     6061 ggatcgcctt cgatatggaa gatagatgct ttggcgtttt ttgctccgtc accgaggctg
     6121 tacatcaaca gcccacagcc tacggaacaa taggtgcagg tattacgggt ttcgcgggtg
     6181 cgcagcagtt tatactgccg ggtttccgcg agcgctacgc tgggtgcaaa acccagtgcc
     6241 gctgccgtgg tgcctgccat accgccagcg cagatcttaa agaactgcct tctgctgacc
     6301 tgcatggatt gctccttgtt tcgacattgt cacgtcccat ttacattcgc ttgctgcgtg
     6361 tgcagggagt gggagttatt tttctttgcg gaaggggccg caaaggtcca gaattggctc
     6421 aatttccctc catccaggaa gggtttgtaa cagaatacca taatgttggt gtgtgtgttc
     6481 ttatctggtt aagagaaagt gaaaaaaaca cagcaaaaag aaatcgaaaa tgtgacaaat
     6541 atcacaggtg ttcgtcaaat tgagttatgg cggcgtgatg atttacaaca cccacggtta
     6601 gatgaggtcg cggaagaagt tcccgttgcg ctggtctaca acggcatttc gcatgtggtg
     6661 atgatggcgt cgcccaaaga ccttgagtac tttgcgctcg gtttttcgct ttccgagggg
     6721 ataatagaaa gtccgcgcga tatcttcggc atggatgtcg ttccttcctg taatggtctt
     6781 gaagtacaaa ttgagctttc cagccgccgc tttatggggt tgaaggagcg ccgccgggcg
     6841 ctggcgggac gtacgggctg tggcgtatgc ggcgtggagc aacttaatga catcggaaaa
     6901 ccggtgcagc cgctaccgtt cacccagacg tttgatctca acaaactgga tgatgcatta
     6961 cgtcatctca acgattttca gccagtgggg caactgactg gttgtactca cgccgctgcc
     7021 tggatgttgc catctggcga actggtcggc gggcatgaag acgtgggtcg ccatgtggcg
     7081 ctggacaaac tgttaggccg ccggtcacaa gaaggggaaa gctggcagca aggtgcggta
     7141 ctggtttcca gtcgtgccag ttatgaaatg gtgcaaaagt cggcgatgtg cggcgtagag
     7201 attttgtttg cggtgtctgc cgcgaccacg cttgctgtag aagtggctga gcgttgtaat
     7261 ctgacgctgg tgggtttttg taagccgggt cgggcaacgg tttataccca tccgcagcgt
     7321 ttgagcaatt aattaaaata agtcc
//
LOCUS       DAPGWB010000199         7242 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.201, whole genome shotgun sequence.
ACCESSION   DAPGWB010000199 DAPGWB010000000
VERSION     DAPGWB010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7242
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.201"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            12..290
                     /gene="yafQ"
                     /locus_tag="RHX79_004177"
     CDS             12..290
                     /gene="yafQ"
                     /locus_tag="RHX79_004177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin YafQ"
                     /protein_id="HDV2199284.1"
                     /translation="MIQRDIEYSGQFSKDVKLAQKRHKDMNKLKYLMTLLINNALPLP
                     AVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG"
     gene            446..1186
                     /locus_tag="RHX79_004178"
     CDS             446..1186
                     /locus_tag="RHX79_004178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HDV2199285.1"
                     /translation="MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPV
                     YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ
                     LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG
                     ALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVN
                     GRYVVSKPLSHEVVQPQLASNYTLPEAK"
     gene            complement(1157..1924)
                     /locus_tag="RHX79_004179"
     CDS             complement(1157..1924)
                     /locus_tag="RHX79_004179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HDV2199286.1"
                     /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
                     GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN
                     WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA
                     SLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT
                     PNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV"
     gene            complement(2130..2708)
                     /gene="lpcA"
                     /locus_tag="RHX79_004180"
     CDS             complement(2130..2708)
                     /gene="lpcA"
                     /locus_tag="RHX79_004180"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDV2199287.1"
                     /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG
                     GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS
                     RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
                     RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
     gene            2948..5392
                     /gene="fadE"
                     /locus_tag="RHX79_004181"
     CDS             2948..5392
                     /gene="fadE"
                     /locus_tag="RHX79_004181"
                     /EC_number="1.3.8.7"
                     /EC_number="1.3.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase FadE"
                     /protein_id="HDV2199288.1"
                     /translation="MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWS
                     AWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL
                     FQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK
                     EHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGT
                     DEQKNHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWN
                     KRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVP
                     FQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALA
                     TGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAI
                     VKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMI
                     FGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSST
                     PTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAV
                     LKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRH
                     YLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQ
                     RICKELGKNLPFTRLDELAHNALAKGLIDKDEAAILVKAEESRLRSINVDDFDPEELA
                     TKPVKLPEKVRKVEAA"
     gene            complement(5435..5881)
                     /gene="ivy"
                     /locus_tag="RHX79_004182"
     CDS             complement(5435..5881)
                     /gene="ivy"
                     /locus_tag="RHX79_004182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308274.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ivy family C-type lysozyme inhibitor"
                     /protein_id="HDV2199289.1"
                     /translation="MFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQG
                     HKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFS
                     TIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK"
     gene            6062..6832
                     /gene="yafV"
                     /locus_tag="RHX79_004183"
     CDS             6062..6832
                     /gene="yafV"
                     /locus_tag="RHX79_004183"
                     /EC_number="3.5.1.111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutaramate amidase"
                     /protein_id="HDV2199290.1"
                     /translation="MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMF
                     TSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV
                     HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAL
                     YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA
                     TADAHQATRIDAELSMAVLREYRDKFPAWRDADEFRLR"
     gene            complement(6874..>7242)
                     /locus_tag="RHX79_004184"
     CDS             complement(6874..>7242)
                     /locus_tag="RHX79_004184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000420980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HDV2199291.1"
                     /translation="LKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIR
                     NHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKM
                     RKAAMDRNYLASVLAESGLS"
BASE COUNT         1689 a         1830 c         1928 g         1795 t
ORIGIN      
        1 ggaatttaaa tatgattcaa agggatattg aatactcggg acaattttca aaggatgtaa
       61 aacttgcaca aaagcgtcat aaggatatga ataaattgaa atatcttatg acgcttctta
      121 tcaataatgc tttaccgctt ccagctgttt ataaagacca cccgctgcaa ggttcatgga
      181 aaggttatcg cgatgctcat gtcgaaccgg actggatcct gatttacaaa cttaccgata
      241 aacttttacg atttgagaga actggaactc acgcggcgct ctttgggtaa agcacgctgc
      301 cgatgaaatt tgtaaaccct gcgccgacag gcttgcgtaa aactcttttg gtgataatgt
      361 gagccttcca aatccagact attccgattt gggatctatt ttgccgtcct ggcgtgtgta
      421 accgttttat caaggaataa gcagtatgcg taaaatcgca ttaattcttg cgatgttgtt
      481 gatcccgtgc gtttcgtttg ccggtttgct gggcagcagt agctcgacca cgccagtgag
      541 caaagagtat aagcagcagt tgatgggatc ccctgtctac atccagatct tcaaggaaga
      601 acgtacgctc gatctctacg tcaaaatggg cgagcaatat cagctgctcg acagttataa
      661 aatctgtaaa tattccggcg gcttagggcc aaaacagcgt cagggcgatt tcaaaagccc
      721 ggaagggttt tatagcgtcc agcgtaatca gttaaaacca gacagccgtt actacaaagc
      781 gattaatatt ggtttcccca atgcctatga ccgtgcgcat ggttatgaag ggaaatacct
      841 gatgatccac ggcgattgtg tttccatcgg ctgctacgca atgaccaatc agggtattga
      901 tgagatcttc cagttcgtta ctggtgcgct ggtgtttggt cagccgagcg tgcaagtgag
      961 tatttacccg ttccgcatga ccgacgccaa tatgaagcgc cataaatatt ccaactttaa
     1021 ggacttctgg gagcaactga agccgggtta cgactacttt gagcaaaccc gtaagccacc
     1081 gaccgtttct gtggtcaatg gtcgttacgt ggtcagcaag ccgttaagcc acgaagttgt
     1141 gcagccacaa ctggcatcaa actacacgct ccccgaggca aaataagcgc cattcgcctg
     1201 gcataatctt ttgccaggtt tcattgcccg tcagcggctg tgttgcaatc accgtgacca
     1261 catcattcgg tgtggtctgc gagctgaagt cgatttccac atcctgatcc agcagcgttg
     1321 ccacgccaaa cggcgcgcgg cgggtgatcc agtgtaaatt agtcgagcaa tacgccatca
     1381 catagcgccc gtcagaaagc agcatgttga aaacgccctt ctgccgcagt tcatccgcca
     1441 gtgaggcgat atatttaaac actgccgcca tgttgcccgg tgtgcgcggg taacgctgcg
     1501 ttaatttatg caggagccag cagaaggctt tttcgctatc ggtttcaccg accgggcgga
     1561 agttgccggt ttccagtgat ttgtagcccg tcagttgtcc gttatgggca taagtccagt
     1621 tacgccccca taactcgcgg gtaaatgggt gagtattttc cagcgccacc tcgccccgat
     1681 tagcctggcg aatatgagcc accaccgaac aggattttat cgggtagtcc tggacaagtt
     1741 tggcgatggg ggaattaaag ctgggttgtg gatctttaaa tgtgcgacag cctttacctt
     1801 cgtaaaaggt aatgccccag ccatctttat gtggcccggt tccaccacca cgctgtacaa
     1861 gtccggtgaa actaaagcag atatcggtag ggacgttggc gctcatcccg agcaattcgc
     1921 acatgggtaa cctccacaac agcgggagcg catggccccc ggcgaagatt gatttaagaa
     1981 ttttcaggtc ggatgcggcg taaacgaatt attcggccta cggttcgcgt acagatttgt
     2041 aggcatgata agacgcgtca gcatcgcatc aggcatcagc gcacaagtgc cggatgcggc
     2101 gtaaacgcct tatccggcct acgccagact tacttaacca tctctttttc aattaactgg
     2161 atcaggatat ggatcacttt aatgtgaatc tcctgaatgc ggtcggcata accaaagtgc
     2221 ggaacgcgaa tttcgatatc cgccgtgcca gccattttac cgccgtcttt accggtcagg
     2281 gtgatcactt tcatcccctt ctcacgcgcc gctgcgatcg ctttgatcac gtttgcagag
     2341 ttaccggagg tggagatccc cagcagtaca tcgccttcgc gacctaccgc ttcaacgtag
     2401 cgggagaaaa tatcattgaa accgaaatca ttaccgacgc aggaaatatg actaacgtca
     2461 gaaatagcaa tcgccgggta gcccggacgg ttttcacggt agcgaccggt caactcttcg
     2521 gcaaagtgca tagcgtcgca atgggaaccg ccgttgccgc aggaaagcac tttgccaccg
     2581 gctttaaagc tgtctgctaa caggaccgcc gcgcgctgaa tggcgtgaat attggcgtca
     2641 tcttttaaaa agttagccag cgtttccgcc gcttcgttca gttcgttacg aataagatcc
     2701 tggtacatga ggatatcctt cagcataaat gtaatagaca aaatgcagtg taccggatac
     2761 cgccaaaagc gagaagtacg ggcaggtgct atgaccagga ctttttgacc tgaagtgcgg
     2821 ataaaaacag caacaatgtg agctttgttg taattatatt gtaaacacat tgctaaatgt
     2881 ttttacatcc actacaacca tatcatcaca agtggtcaga cctcctacaa gtaaggggct
     2941 tttcgttatg atgattttga gtattctcgc tacggttgtc ctgctcggcg cgttgttcta
     3001 tcaccgcgtg agcttattta tcagcagtct gattttgctc gcctggacag ccgccctcgg
     3061 cgttgctggt ctgtggtcgg cgtgggtact ggtgcctctg gccattatcc tcgtgccatt
     3121 taactttgcg cctatgcgta agtcgatgat ttccgcgccg gtatttcgcg gtttccgtaa
     3181 ggtgatgccg ccgatgtcgc gcactgagaa agaagcgatt gatgcgggca ccacctggtg
     3241 ggagggcgac ttgttccagg gcaagccgga ctggaaaaag ctgcataact atccgcagcc
     3301 gcgcctgacc gcagaagagc aagcgtttct cgacggtccg gtagaagaag cctgccggat
     3361 ggcgaatgat ttccagatca cccatgagct ggctgatttg ccgccggagt tgtgggcgta
     3421 ccttaaagag catcgtttct tcgcgatgat catcaaaaaa gagtacggcg ggctggagtt
     3481 ctcggcttat gcccagtctc gcgtgctgca aaaactctcc ggcgtgagcg ggatcctggc
     3541 gattaccgtc ggcgtgccga actcattagg cccgggcgag ctgctgcaac attacggcac
     3601 tgacgagcag aaaaatcact atctgccgcg tctggcgcgt ggtcaggaga tcccttgctt
     3661 tgcactgacc agcccggaag cgggttccga tgcaggcgct atcccggata ccgggattgt
     3721 ctgcatgggc gaatggcagg gccagcaggt gctggggatg cgtctgacct ggaacaaacg
     3781 ctacattacg ctggcaccga ttgcgaccgt gcttgggctg gcgtttaaac tctccgaccc
     3841 ggagaaattg ctgggtggcg cagaagattt aggtattacc tgtgcgctga tcccaaccac
     3901 cacgccgggc gtggaaattg gtcgtcgcca cttcccgctg aacgtgccgt tccagaatgg
     3961 accgacgcgc ggtaaagatg tcttcgtacc gatcgattac attatcggcg ggccgaaaat
     4021 ggccgggcaa ggctggcgga tgctggtgga gtgcctctcg gtaggccgcg gcatcaccct
     4081 gccttccaac tcaaccggcg gcgtgaaatc agtagcgctg gcaacgggcg cgtatgctca
     4141 cattcgccgt cagttcaaaa tctctatcgg taagatggaa gggattgaag agccgctggc
     4201 gcgtattgcc ggtaatgcct acgtgatgga tgctgcggca tcgctgatta cctacggcat
     4261 tatgctcggc gaaaaacctg ccgtgctgtc ggctatcgtt aagtatcact gtacccaccg
     4321 cgggcagcag tcgattattg atgcgatgga tatcactggt ggcaaaggca ttatgctcgg
     4381 gcagagcaac ttcctggcgc gtgcttacca gggcgcaccg attgccatca ccgttgaagg
     4441 ggccaacatt ctgacccgca gcatgatgat cttcggacaa ggagcgattc gttgccatcc
     4501 gtacgtgctg gaagagatgg aagcagcgaa gaacaatgac gtcaacgcgt tcgataaact
     4561 gttgttcaaa catatcggtc acgtcggtag caacaaagtt cgcagcttct ggctgggcct
     4621 gacgcgcggt ttaaccagca gcacgccaac cggcgatgcc actaaacgct actatcagca
     4681 cctgaaccgc ctgagcgcca acctcgccct gctttctgat gtctcgatgg ctgtgctggg
     4741 cggcagcctg aaacgtcgtg agcgcatctc ggcacgtctg ggggatattt taagccagct
     4801 ttacctcgcc tctgccgttc tgaagcgtta tgacgacgaa ggccgtaatg aagccgacct
     4861 gccgctggtg cactggggcg tacaagatgc gctgtatcag gctgaacagg cgatggatga
     4921 tttactgcaa aacttcccga accgcgtggt tgccgggctg ctgaatgtgg tgatcttccc
     4981 gaccggacgt cattatctgg caccttctga caagctggat cataaagtgg cgaagatttt
     5041 acaagtgccg aacgccaccc gttcccgcat tggtcgcggt cagtacctga cgccgagcga
     5101 gcataatccg gttggcttgc tggaagaggc gctggtggat gtgattgccg ccgacccaat
     5161 tcatcagcgg atctgtaaag agctgggtaa aaacctgccg tttacccgtc tggatgaact
     5221 ggcgcacaac gcgctggcga aggggctgat tgataaagat gaagccgcta ttctggtgaa
     5281 agctgaagaa agccgtctgc gcagtattaa cgttgatgac tttgatccgg aagagctggc
     5341 gacgaagccg gtaaagttgc cggagaaagt gcggaaagtt gaagccgcgt aattgaataa
     5401 cggagccgaa aggctccgtt tctttatccg ctaattattt aaaattaaag ccatccggat
     5461 ggttttccag gctgccggtc aacgccgcga acagcaccgt tttaccatca atcgaaagcg
     5521 catcgttcac attcagccag gtgagtttct cttgcgacgt tttctcatca atagtcgaga
     5581 acagccccgt catctgatta gatttctcgg accacatcac agcgatacgt tgcgagccac
     5641 agtcatgcgg tttgcacgcg ctcatcacct gatacgtctc atctcccaac gttacggttt
     5701 gtgcgggagt ataagtaccg cctttcatca cccaggcagg cagcttatgc ccttgtacca
     5761 tctgattaaa tgcagctttg gtggtttcgc cctttgcaag gctgctaatg gttaaatcat
     5821 cctgcgccat tgcactggtg gcgatgacca gagcggcgac tgtcgttatt gccttaaaca
     5881 tcattcctcc cgagcttatc ctgcccatgt tattaacctt ctaaagcctg gcgataacac
     5941 gataatttgc aaatcagata tttccaatat cagcatttgt tatcaattta ttctgcgcta
     6001 aggcaactgc ctgataaggt gttaaagtta taaaaccctt cgcataaagg agttgtacac
     6061 cgtgcctggt ttgaagatta cgcttttgca gcaaccactg gtgtggatgg atggccctgc
     6121 caacctgcgt cattttgatc gtcaactgga aggtattacc gggcgcgatg tgatcgttct
     6181 accggagatg tttaccagcg gctttgccat ggaagcggca gcttcgtcgc tagcacaaga
     6241 tgacgtagtg aactggatga cagctaaggc gcagcagtgc aatgcgctga ttgcaggcag
     6301 tgttgcatta caaacggagt ctggttcggt taaccgcttt ttgctggttg agccgggcgg
     6361 cacggtacat ttttatgata agcgtcatct attccgcatg gcagatgagc atctacatta
     6421 taaagcgggc aatgcgcgag tgattgtgga atggcgcggc tggcgtattt tgccgctggt
     6481 gtgctacgac ttacgttttc ctgtgtggtc gcgcaatctc aacgattatg acctcgccct
     6541 gtacgtcgcc aactggcctg ctccgcgctc tctgcactgg caggcattgc tgacggcccg
     6601 cgcgattgag aatcaggcgt atgtggcggg atgcaatcgc gtcggcagcg atggcaacgg
     6661 ctgccattat cgcggtgaca gccgggtgat taatccacaa ggcgagatta tcgctactgc
     6721 cgacgcgcat caggcaacgc gcattgatgc cgagctgtcg atggcggtgt taagggaata
     6781 tcgcgataag tttccggcat ggcgggatgc ggatgagttt aggttgcggt gagtgggggt
     6841 tgtgtttaag gctgggggag agtcggggta agactacgaa agcccgctct ccgcaaggac
     6901 tgacgccaga tagtttctgt ccatagctgc ttttcgcatc ttacgtctta accctgcctt
     6961 gaatacctta tcattcgtca aaatattaat agcgatgtgc cgtatccctg aaaataattc
     7021 tgcggcgttt cctcttctta ttttgcagtc gtcttcattc attaccacgt ccagacgcca
     7081 gtgcagctta ttctccacgt gccagtggtt tcggattgct gtggcgaact tttctgcggt
     7141 taaatcagca gaactgatat aatatctgac cgtcatttct ggctctttct tttgttctgc
     7201 tattattgac cgaaaggaga ctgccacgca taatttcttc ag
//
LOCUS       DAPGWB010000200         7123 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.202, whole genome shotgun sequence.
ACCESSION   DAPGWB010000200 DAPGWB010000000
VERSION     DAPGWB010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7123)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7123)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7123
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.202"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            181..884
                     /locus_tag="RHX79_004185"
                     /pseudo
     CDS             181..884
                     /locus_tag="RHX79_004185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001334786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin E"
     gene            complement(1091..1537)
                     /locus_tag="RHX79_004186"
     CDS             complement(1091..1537)
                     /locus_tag="RHX79_004186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309703.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HDV2199292.1"
                     /translation="MSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIY
                     FTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDL
                     PAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ"
     gene            complement(1629..2288)
                     /locus_tag="RHX79_004187"
     CDS             complement(1629..2288)
                     /locus_tag="RHX79_004187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDV2199293.1"
                     /translation="MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLF
                     IKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDL
                     TLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEQRQQG
                     TTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRV
                     L"
     gene            complement(2360..2653)
                     /locus_tag="RHX79_004188"
     CDS             complement(2360..2653)
                     /locus_tag="RHX79_004188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HDV2199294.1"
                     /translation="MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMIL
                     PLDGRKKLVNADIEKVKLALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK"
     gene            2895..3296
                     /locus_tag="RHX79_004189"
     CDS             2895..3296
                     /locus_tag="RHX79_004189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPC domain-containing protein"
                     /protein_id="HDV2199295.1"
                     /translation="MKIKSISKAVLLLALLTSTSFAAGKNVNVEFSKGHSSAQYSGEI
                     KGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLP
                     ASGKYELRVLQTRNDARKNKTKKYNVDIQIK"
     gene            complement(3416..3784)
                     /locus_tag="RHX79_004190"
     CDS             complement(3416..3784)
                     /locus_tag="RHX79_004190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199296.1"
                     /translation="MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYIC
                     VNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVD
                     GKRSGKINQITTKMLFMCRE"
     gene            4304..4999
                     /gene="minC"
                     /locus_tag="RHX79_004191"
     CDS             4304..4999
                     /gene="minC"
                     /locus_tag="RHX79_004191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HDV2199297.1"
                     /translation="MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLK
                     HAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGK
                     EKAPRPAPAPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIAD
                     GNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARL
                     QLVENALTVQPLN"
     gene            5023..5835
                     /gene="minD"
                     /locus_tag="RHX79_004192"
     CDS             5023..5835
                     /gene="minD"
                     /locus_tag="RHX79_004192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HDV2199298.1"
                     /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR
                     NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGV
                     AKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL
                     ASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVL
                     RASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG"
     gene            5839..6105
                     /gene="minE"
                     /locus_tag="RHX79_004193"
     CDS             5839..6105
                     /gene="minE"
                     /locus_tag="RHX79_004193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HDV2199299.1"
                     /translation="MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRK
                     DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK"
     gene            complement(6477..6821)
                     /locus_tag="RHX79_004194"
                     /pseudo
     CDS             complement(6477..6821)
                     /locus_tag="RHX79_004194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311542.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(6856..6975)
                     /locus_tag="RHX79_004195"
     CDS             complement(6856..6975)
                     /locus_tag="RHX79_004195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001131457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HDV2199300.1"
                     /translation="MPLSYAGYHHFIMMSLVSGEHNTPALSLQDESPGLVPAG"
     gene            complement(6936..7121)
                     /locus_tag="RHX79_004196"
     CDS             complement(6936..7121)
                     /locus_tag="RHX79_004196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199301.1"
                     /translation="MSRRYSSATITLVILFCRRPHCRKISVRQYYLKRVIFYPTTLQR
                     TACKKCLFLMRDIIISS"
BASE COUNT         2032 a         1694 c         1573 g         1824 t
ORIGIN      
        1 gtagaagtag ttaaaaacgc aatcgaaact gcagatggag cattagatct ttataataaa
       61 tatctcgatc aggtcatccc ctggcagacc tttgatgaaa ccataaaaga gttaagtcgc
      121 tttaaacagg agtattcaca ggcagcctcc gttttagtcg gcgatattaa aaccttactt
      181 atggatagcc aggataagta ttttgaagca acccaaacag tgtatgaatg gtgtggtgtt
      241 gcgacgcaat tgctcgcagc gtatattttt ctatttgatg agtacaatga gaagaaagca
      301 tccgcccaga aagacattct cattaaggta ctggatgacg gcatcacgaa gctgaatgaa
      361 gcgcaaaaat ccctgctggt aagctcacaa agtttcaaca acgcttccgg gaaactgctg
      421 gcgttagata gccagttaac caatgatttt tcagaaaaaa gcagcttttc cagtcacagg
      481 tagataaaat caggaaggaa gcgtatgccg gtgccgcagc cggtgtcgtc gccggtccat
      541 ttggattaat catttcctat tctattgctg cgggcgtagt tgaagggaaa ctgattccag
      601 aattgaagaa caagttaaaa tctgtgcaga atttctttac caccctgtct aacacggtta
      661 aacaagcgaa taaagatatc gatgccgcca aattgaaatt aaccaccgaa atagccgcca
      721 tcggggagat aaaaacggaa actgaaacaa ccagattcta tgttgattat gatgatttaa
      781 tgctttcttt gctaaaagaa gcggcaaaaa aaatgattaa cacctgtaat gagtatcaga
      841 aaagacacgg taaaaagaca ctctttgagg tacctgaagt ctgataagcg attattctct
      901 ccatgtactc aaggtataag gtttatcaca tttaaaaaca cagacgtttt ttaaagattg
      961 agagttacct gttgataata aggtatcggg taactctcat tatgacagag cgctttcaaa
     1021 aacagggcta cgaaatggcg agcatccaga cgtatattaa gaaagccccc atcaacatct
     1081 attaaattta tcactgcgcc cagtcaggtt tatttaagat atgatcctgc cagtcaatca
     1141 cttctgattc tttcactgcg atatgacgca cagagatacg ttcaccatgc attgccgctt
     1201 tcgaaccagt aagtagcgga tgccacgcag gtaaatcttt accttccgcc agcaaacgat
     1261 aagcgcaggt cattggcagc cattcgaatg ttggcagatt ttcacgggtt aatttaatgc
     1321 agtcgggttc aaactcgaaa cgacgttcgt agttccgaca ttgacaagtt ttaatattga
     1381 gctggcgaca ggcgacgtta gtgaagtaga tttcgtcggt gtcttcatcc atcagtttat
     1441 gcaggcaaca ctgaccgcaa ccatcacaca acgactccca ttccgcatcg ctcatttcgt
     1501 ccagggtttt actttgccag aaaggtacat cgctcatcag gtgttccgcc attacgttaa
     1561 aacgcacctt ataaccagtc tggcacagcg atgcaagttt tgccgccgct ttcaggcggc
     1621 aaaaagtatt acaaaacgcg agttgtcaaa gaatgcccat cgaaagtgac tgtcagctca
     1681 tcaccgcttt gcaacgggcc gacgccatca ggcgtgcctg tcaacacaac gtcaccggcc
     1741 ttgagggtaa aaaacttgct catataagcg atcaacggaa cgattttatg gatcatgtcc
     1801 gcagtcgtac cttgctggcg ttgttcgccg tttacgctca ggcccagcgt tgtattttgt
     1861 ggatcgccgg taaattccgc cgcggggata aacccggaaa gcggacaaga gttatcaaac
     1921 gctttagcct tttcccacgg ctgcccggct ttcttcattt ttccctgaac atcacgcaat
     1981 gtcagatcaa gcgccacgcc gtaaccggca atggctttgc ggacatgctc ttccgttgcc
     2041 tgacgcagcg tcgcgccaat caacaccgcc agttcgactt catgatgaac tgaaccgaaa
     2101 tcggatggga tcgccaatgg ctgccgcaga tcgcacagtg ccgtttctgg tttaataaac
     2161 agcactggct cttcgggcac tgcgctgccc atctctttaa tatgtttggc atagttactg
     2221 ccaacacaga ctactttact caccggataa tccagcagcg caccttgcca gttgtgatgt
     2281 tgatacataa cgttcccctc accttatcgt ggatatgaaa acccgcgccg acaaagataa
     2341 tgccaccgcc ggatatcggt tatttgttag tgtcgtctgt tttctgcccc atgacggaaa
     2401 gatgttgctt cagcaaatct tcgggtggtg gcggtaactg caaatagtaa ccttgctcgg
     2461 ttaatgccag tttaaccttt tcaatatcag cattgaccag tttcttccgc ccatccaacg
     2521 gcagaatcat cgctaactga ggctgaccaa aacctttcat cagttcctca ggaacacgcg
     2581 aaaaatcgtc ttttttttcg acatataaat aggtctggtc acgcttgctg cttcgataaa
     2641 tcacacaaaa catactttta ctctttaaga tgccaggttt tggcataagc taacatcaat
     2701 gaaacccgcg ccacaagcca gccagctgta gatttctgcg gtttgttgag tccatgcccc
     2761 tttataagta atccccccgg caaaaaatgc cgcgccggga ttttaccgaa cgcagaaaag
     2821 ccactggaat tctcccgtaa gggattgtta tattataaca gttcatcgta ctcattctga
     2881 acaggagact accaatgaaa atcaagagca tcagtaaggc tgtattgctg cttgcactgc
     2941 taacctccac gagctttgct gcgggtaaga atgtcaatgt tgagttcagc aaaggccata
     3001 gcagcgctca gtactccggc gaaataaagg gatacgatta cgatacatat accttctatg
     3061 ccaaaaaagg tcagaaagtg catgtgagta tctctaatga aggcgctgat acttacctct
     3121 tcgggccagg aatcgatgat tcagttgatt tatccagata ttcaccagaa ctcgatagtc
     3181 acggacaata ctcactccct gcttctggca aatatgagct gcgagtgctg caaacccgaa
     3241 acgacgcccg taaaaacaaa actaaaaaat ataacgtcga tattcaaatt aagtaaatgt
     3301 caaccgacgg ggactctccc cgtcataaac gttaacgccc cactcctctc tgtcgctcaa
     3361 gaggttaatg acgaatagca gacaatgccg aatagaacat aatgtaaaca aggcatcact
     3421 cacgacacat aaataacatc tttgtggtga tttgattgat ttttccactc cgcttaccat
     3481 ccacaccaaa ataacgatca tcacgacata atttttcttt aacatcgcaa aatacaccgt
     3541 tagcgaatgt aaattcgctg ggatcgtagc cttgtaatga ttgtaagttt tcagcggctt
     3601 tttcgccgag atatttcctt gttaactctg gggaaatgcc atctgagttc acacaaatat
     3661 acgggtcgca aacaacgccg cacgccggag attgaagtcc gccagcgtca tgtccagacg
     3721 ccattgatga gaacatcatc cccacacctg acaatccgat ataaaaaata cgcatcatat
     3781 tcatagcaca tcctgataat ccaaccgtac aacacttatg ctcatttcat catcaatccg
     3841 taatcaaaac cgctgacctg gacgagttac gatgacctga cagaagtatc agacgtcttc
     3901 tgcggtttct atgatagagc aattctgtgg cggatattaa gataacgggt atctgttctt
     3961 taatgatgcc gcaaaaaatg gaaagttaag aaagcctggc gtggtgaaaa aatacacttg
     4021 cctcaatact ggatatttaa acaggtctgg agatgctgtc acgattaggg tgcggaaaaa
     4081 ggaagcgtaa ataagaacaa tcaaaagtac gacggcaatg ggttgattga caagggtatt
     4141 ttttaagcta tgaatcagcg ccatttatca cagaatagac ttttactctg aataaatggg
     4201 agggtgactt gcctcaatat aatccagact ataacatgcc ttatagtctt cggaacatca
     4261 tcgcgcgctg gcgatgatta atagctaatt gagtaaggcc aggatgtcaa acacgccaat
     4321 cgagcttaaa ggcagtagct tcactttatc tgtggttcat ctgcatgagg cagaacctaa
     4381 ggttatccat caggcgctgg aagacaaaat cgctcaggcc cccgcatttt taaaacatgc
     4441 ccccgttgta ctcaacgtca gtgcactgga agacccggta aactggtcag cgatgcataa
     4501 ggcggtttcg gcaaccggtt tgcgggttat tggcgtaagt ggctgcaaag atgcgcaact
     4561 taaagccgaa attgaaaaga tggggctgcc tatcctgacg gaaggaaagg aaaaagcgcc
     4621 gcgtccagct cccgcaccac aggctccagc gcaaaataca acgccggtca caaaaacgcg
     4681 tttaatagat accccggtgc gttccggtca gcgtatttat gctccacaat gtgatctgat
     4741 tgttacaagc cacgttagcg ctggggccga attgattgcc gatgggaaca ttcatgtcta
     4801 tggcatgatg cgcggtcgtg cgcttgcagg ggcaagtggt gaccgggaaa cgcaaatatt
     4861 ttgtacgaac ctgatggcgg aactggtgtc catcgcaggt gaatactggc tgagtgatca
     4921 aatcccagca gaattttatg gcaaagcggc gcgactgcag ttagtcgaaa acgctttgac
     4981 cgttcaaccg ttaaattgat ccctttttaa caaggaattt ctatggcacg cattattgtt
     5041 gttacttcgg gcaaaggggg tgttggtaag acaacctcca gcgcggccat cgccactggt
     5101 ttggcccaga agggaaagaa aactgtcgtg atagattttg atatcggcct gcgtaatctc
     5161 gacctgatta tgggttgtga acgccgggtc gtttacgatt tcgtcaacgt cattcagggc
     5221 gatgcaacgc taaatcaggc gttaattaaa gataagcgta ctgaaaatct ctatattctt
     5281 ccggcatcgc aaacacgcga taaagatgcc ctcacccgtg aaggggtcgc caaagttctt
     5341 gatgatctga aagcgatgga ttttgaattt atcgtttgtg actccccggc agggattgaa
     5401 accggtgcgt taatggcact ctattttgca gacgaagcca ttattaccac caacccggaa
     5461 gtctcctcag tacgcgactc tgaccgtatt ttaggcattc tggcgtcgaa atcacgccgc
     5521 gcagaaaatg gcgaagagcc tattaaagag cacctgctgt taacgcgcta taacccaggc
     5581 cgcgtaagca gaggtgacat gctgagcatg gaagatgtgc tggagatcct gcgcatcaaa
     5641 ctcgtcggcg tgatcccaga ggatcaatca gtattgcgcg cctctaacca gggtgaaccg
     5701 gtcattctcg acattaacgc cgatgcgggt aaagcctacg cagataccgt agaacgtctg
     5761 ttgggagaag aacgtccttt ccgcttcatt gaagaagaga agaaaggctt cctcaaacgc
     5821 ttgttcggag gataagttat ggcattactc gatttctttc tctcgcggaa gaaaaacaca
     5881 gccaacattg caaaagaacg gctgcagatt attgttgctg aacgccgtcg cagcgatgca
     5941 gaaccgcatt atctgccgca gttgcgtaaa gatattcttg aggtcatttg taaatacgta
     6001 caaattgatc ctgagatggt aaccgtacag cttgagcaaa aagatggcga tatttctatt
     6061 cttgagctga acgtgacctt accggaagca gaagagctga aataagcccg ctgtaaaaac
     6121 gcatttatct tcaaggcaga gtcatttctg ccttgagttt ttcatccctc tcatccacgt
     6181 tgtggtaaag cggcgagtat tcttgctgat actcctcatt gctatttcca cctccccctt
     6241 tacaccttaa ggctgttccc acgcacagaa caaaatgttt atgcctggtt gagtaaataa
     6301 ccctgttgtt agtgtggata tactgggaga tgataacccc gcaatttcat tattcattgt
     6361 tctcccatag gatgaggttt cccgccgtaa ctggcgggct ttttttgccc cagaattttc
     6421 tctttcaaca tcctgtaaac gaaaactgcg ccgaagcgca gtttaatcgt tgatggtcag
     6481 aacgaccagt tcacaccagc caccgcgttc cacggggact ccacaccggc accatggcta
     6541 taccccaccc cgaaatgccc gcttaacgta ctgctgaatg aggctttaat acctgcctgg
     6601 tatattccac gtctgcccga caaatcattg acaaaattac cgtcactatt cactttcacc
     6661 cgattatcat cgacaaattc tttgcgcaca gccgccttca ggcagggttc aatttccata
     6721 ccgttcccca gacgcatgtt gtaactcagc gttgcaccca gttcacgata tatactgcgg
     6781 gtatcgactg atttcgattc catgccattg gataaatgat agtagcgtct aagtgaccta
     6841 agctctgctg caacatcagc ccgcaggcac cagaccaggg gattcatcct gaagagacag
     6901 cgcaggtgta ttgtgttcac cgctcaccaa agacatcatg atgaaatgat gatatcccgc
     6961 ataagaaaga ggcatttttt acacgcagtg cgctgaagtg tagttggata aaaaatcact
     7021 cttttcagat aatactgtcg tacgcttatc tttcgacaat gaggccgtcg gcaaaataaa
     7081 atgactaatg taatcgttgc tgatgaatat cttctgctca cat
//
LOCUS       DAPGWB010000201         7105 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.203, whole genome shotgun sequence.
ACCESSION   DAPGWB010000201 DAPGWB010000000
VERSION     DAPGWB010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7105
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.203"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            116..1450
                     /gene="adeQ"
                     /locus_tag="RHX79_004197"
                     /gene_synonym="yicO"
     CDS             116..1450
                     /gene="adeQ"
                     /locus_tag="RHX79_004197"
                     /gene_synonym="yicO"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine permease AdeQ"
                     /protein_id="HDV2199302.1"
                     /translation="MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMV
                     YIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFV
                     VVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALM
                     GLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCC
                     GLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGV
                     TDKAGLIDSNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTA
                     VVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITT
                     VMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD"
     gene            1503..1955
                     /locus_tag="RHX79_004198"
     CDS             1503..1955
                     /locus_tag="RHX79_004198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1198 domain-containing protein"
                     /protein_id="HDV2199303.1"
                     /translation="MIWIMLATLAVVFVVGFRVLTSGARKAIRRLSDRLNIDVVPVES
                     MVDQMGKSAGDEFLRYLHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKAR
                     LAAPITDAQVRLALGFLRETEPEMQDINAFQMRYNAFFQPAEGVHWLH"
     gene            2166..3356
                     /gene="nepI"
                     /locus_tag="RHX79_004199"
     CDS             2166..3356
                     /gene="nepI"
                     /locus_tag="RHX79_004199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418118.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine ribonucleoside efflux pump NepI"
                     /protein_id="HDV2199304.1"
                     /translation="MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLT
                     PMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLV
                     SFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA
                     APLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGV
                     MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFIL
                     KRSVKLALAGTPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSL
                     ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVK
                     MKKS"
     gene            complement(3397..3690)
                     /locus_tag="RHX79_004200"
     CDS             complement(3397..3690)
                     /locus_tag="RHX79_004200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199305.1"
                     /translation="MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKI
                     CTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM"
     gene            3912..4730
                     /gene="nlpA"
                     /locus_tag="RHX79_004201"
     CDS             3912..4730
                     /gene="nlpA"
                     /locus_tag="RHX79_004201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpA"
                     /protein_id="HDV2199306.1"
                     /translation="MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQ
                     DVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGY
                     KLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKE
                     GKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDS
                     VFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW"
     gene            complement(4734..5657)
                     /locus_tag="RHX79_004202"
     CDS             complement(4734..5657)
                     /locus_tag="RHX79_004202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV2199307.1"
                     /translation="MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRL
                     IFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATA
                     TVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALF
                     WGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVINGSLI
                     LAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDW
                     LGTLLILSSVILISMDSRRRARKINRPARHE"
     gene            complement(5768..6952)
                     /locus_tag="RHX79_004203"
     CDS             complement(5768..6952)
                     /locus_tag="RHX79_004203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter"
                     /protein_id="HDV2199308.1"
                     /translation="MQKTATTPSKILDLTAAAFLLVAFLTGIAGALQTPTLSIFLADE
                     LKARPIMVGFFFTGSAIMGILVSQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNR
                     NYFILLSTGVLLSSFASTANPQMFALAREHADRTGRETVMFSTFLRAQISLAWVIGPP
                     LAYELAMGFSFKVMYLTAAIAFVVCGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRD
                     TRLLFVVCSMMWAANNLYMINMPLFIIDELHLTDKLAGEMIGIAAGLEIPMMLIAGYY
                     MKRIGKRLLMLIAIVSGMCFYASVLMATTPAVELELQILNAIFLGILCGIGMLYFQDL
                     MPEKIGSATTLYANTSRVGWIIAGSVDGIMVEIWSYHALFWLAIGMLGIAMICLLFIK
                     DI"
BASE COUNT         1787 a         1601 c         1790 g         1927 t
ORIGIN      
        1 gattattaaa gaatatccat taatgtgcaa ttgaaatgtg ataattatca ctgaaccgtt
       61 gttgtcattt gttttacaaa agcaagggat taaatctcct ccaatggaca aaaaaatgaa
      121 taatgacaat accgattacg tgagtaatga atcagggacg ctttcgcgat tatttaaact
      181 acctcagcat gggaccaccg tccgcacaga attgattgcg gggatgacca cttttttaac
      241 catggtgtac atcgtttttg tgaacccgca aatcctcggc gcggcacaaa tggacccgaa
      301 agtggtgttt gttaccacct gtttgattgc cggtatcggc agtattgcga tggggatatt
      361 tgctaactta cccgtggcgc tggctccggc aatggggctg aacgccttct ttgccttcgt
      421 ggtcgtgggg gcgatgggca tctcctggca gaccgggatg ggcgcaatat tctggggcgc
      481 agttggacta tttttgctca cgctgtttcg tatccggtac tggatgatct ccaacattcc
      541 cttaagttta cgtattggta tcaccagcgg aattggatta tttatcgcct taatgggatt
      601 aaaaaatact ggcgttattg tcgccaataa agacacgctg gtgatgattg gcgatttaag
      661 ttctcacggc gtgttgttag gtattttagg gttttttatt ataaccgtgt tgtcatcacg
      721 tcattttcat gccgcggtgc tggtttctat tgtggtgacg tcttgctgtg gattattttt
      781 cggtgatgtt cattttagcg gcgtctattc cattccgcct gatattagcg gcgtcattgg
      841 tgaagtagat ttgagcggcg cgttaacact tgaactcgcc ggtatcattt tctcctttat
      901 gctgatcaac ctatttgatt catcaggaac attaattggt gtaactgata aagcgggctt
      961 aatagatagt aacggtaaat tccccaatat gaataaggcg ctgtatgttg atagcgtcag
     1021 ttcggtggcg ggggcgttta tcggcacctc gtctgttact gcctatattg aaagtacttc
     1081 tggtgtggca gtcggtggtc gcacggggct gactgcggtt gtggttggcg ttatgttcct
     1141 gttagttatg ttcttctcac cgctggtggc gatggttcct ccttacgcaa ccgccggagc
     1201 gttaatcttt gttggcgtgc tgatgacttc gagcctggcg cgcgttaact gggatgattt
     1261 taccgaatcg gtgcctgcgt ttattaccac ggtgatgatg ccctttactt tctcgatcac
     1321 cgaagggatt gcactcggct ttatgtcgta ctgcatcatg aaagtatgca ccgggcgctg
     1381 gcgcgatctg aacctgtgtg tggtggtggt cgcagctctg tttgcactga agattattct
     1441 ggtggattag taactggcga gggtttccag atatcatgag ttctgattac gcaggagaac
     1501 tcatgatctg gataatgctc gccacgctgg cggtagtgtt tgtggttggt tttcgggtgc
     1561 tgacatccgg ggccagaaaa gcgattcgcc gtctcagcga tcggctgaat atcgatgtcg
     1621 tacccgtgga gtcgatggtc gatcaaatgg gaaagtcagc cggtgacgaa tttttacgtt
     1681 atttgcatcg cccggatgag tcgcacctgc aaaacgccgc gcaggtgttg ctcatctggc
     1741 aaattgtcat tgtcgatggt agcgaacaga acctgctgca atggcatcgg attttacaaa
     1801 aagcccgtct tgccgcgccg attaccgatg ctcaggtcag gctggcgctg ggttttctgc
     1861 gcgaaaccga acctgaaatg caggatatta atgcttttca gatgcgctat aacgcgttct
     1921 ttcagcctgc cgagggcgtt cactggctgc attaaaaccg cttcgtctta tcagcctaca
     1981 gaccgcgcct gacctgtcgg gtggataaga cgttcacgcc gcatccggta atctttgccc
     2041 tgttccgttt cgatcttaac tccagctcaa gcaacaccgt aaaagttgca aaaacgttaa
     2101 atgcgtcaca catttcaatg ttaaagtggt cggcttttcc cctgaaacat gccacgggta
     2161 acaccatgag tgaatttatt gccgaaaacc gcggcgcgga tgccatcacc cgaccgaact
     2221 ggtcagccgt tttctcggtg gcgttttgcg tcgcctgtct gattatcgtt gagtttttgc
     2281 ccgtcagttt gttgacgcct atggcccagg atttaggcat ttcggaaggg gttgccgggc
     2341 aatcggtgac cgtgaccgcc tttgtggcaa tgtttgccag tttgtttatt acccagacaa
     2401 ttcaggccac tgaccgccgc tacgttgtta ttttgtttgc cgttttgctg acgctctcct
     2461 gtttgctggt ttcctttgcc aactcattca gtttgctttt aatcggtcgt gcctgtctgg
     2521 ggctggcgct gggcgggttc tgggcgatgt cggcgtcgct gaccatgcgt ctggtaccgc
     2581 cgcgtacggt gccgaaggcg ctgtcggtga tcttcggcgc ggtttctatt gcgctggtga
     2641 ttgccgcgcc gttgggcagt tttttaggcg agcttatcgg ttggcgcaat gtctttaatg
     2701 cggcggcggt gatgggcgtg ttgtgtattt tctggattat caaatcattg ccttcactgc
     2761 caggcgaacc ctcgcatcag aaacaaaata ctttccgctt attacaacgt ccgggtgtga
     2821 tggcagggat gatcgccatc ttcatgtctt tcgccgggca gtttgctttc ttcacgtata
     2881 ttcgcccggt gtatatgaac ctggcgggat tcggcgtgga tggcttaacg ctggtgctgt
     2941 tgagttttgg tatcgccagc tttattggta cgtcgctttc gtcgttcatt cttaaacgtt
     3001 cggtaaaact ggccttagca ggcacgccgt taatactggc tgtgagtgcg ttggtactga
     3061 cgttgtgggg aagcgataaa atcgttgcta ccggcgtggc gattatctgg gggctaactt
     3121 ttgcattggt tcccgtcggc tggtcaacgt ggatcacccg ctcgctggcc gatcaggcag
     3181 aaaaagccgg gtctattcag gtggcggtta ttcagcttgc taatacctgt ggcgcggcaa
     3241 tcggcggtta tgcgctggat aatattggtc tgacttcgcc gttgatgttg tccggcacat
     3301 tgatgttgct gactgcattg ttggttactg caaaggtgaa aatgaagaaa tcctgatatc
     3361 aggtaaagaa gcgttggtca gtagttgttg ctgttcttac atatccgggc attctacctt
     3421 acccaacgct tcccaataat tgctctgatt attacgttcc atcgccacga tggcctcgcg
     3481 tatatgttgt ttattgtttt catctgacaa cattaacttt tcccacgctt catctgataa
     3541 tgacgcctgt ggcgtgcaaa ttttacgtaa atcttgtaat accgtggttt tctcttttgc
     3601 ggactgcagt gagctaaaag gcgactcggc gtatacgatg cctggcatag cgaaaaaagt
     3661 gaaaataagc agtagtgtcg ttggtttcat ggattcaacc ttttacaaat gtgtatcgaa
     3721 tgaagcataa gtgtagtttg ctttcatcgc tctcatcatg ctgtacgaaa cgcgcttgcg
     3781 tggtcagtaa gaagtgccag actttatatt ccacttttat tcctttttat tcttatcgat
     3841 agcgtttcgt tttttaaacc gcagcgacct taccgctata gtcaggtaat cattaataaa
     3901 aggataaaaa aatgaaactg acaacacatc atctacggac aggggccgca ttattgctgg
     3961 ccggaattct gctggcaggt tgcgaccaga gtagcagcga tgcaaaacac attaaagttg
     4021 gcgttataaa tggcgcagaa caagatgtcg cggaagtcgc taaaaaggtg gcaaaagaga
     4081 aatatggcct cgatgttgaa ctggtaggat ttagcggttc gttgctaccg aacgatgcga
     4141 caaatcatgg cgaacttgat gcgaatgtct tccagcatcg accctttctt gaacaagata
     4201 atcaggcgca tggttataaa ctggtagcgg tgggaaatac gtttgtcttc cctatggcgg
     4261 gttattccaa aaaaatcaaa accgtggcgc aaataaaaga aggcgcgaca gtggcgatcc
     4321 ccaacgaccc gaccaacctt ggtcgcgcac ttttactgtt gcaaaaagag aagctaatta
     4381 ctctgaaaga gggaaaaggg ttattaccta ccgcgctgga tataaccgat aatcctcgtc
     4441 atttgcagat tatggaactc gagggggcgc agctcccgcg cgtactggat gatcccaaag
     4501 ttgatgtagc gattatcagc accacttaca ttcagcagac agggctttct ccggtgcacg
     4561 acagcgtatt tattgaagat aagaattcgc cgtatgtgaa tattttggtg gcacgggaag
     4621 ataataagaa tgcagaaaac gtgaaggaat ttctgcaatc ttatcaatca cccgaagtcg
     4681 ctaaagcggc agaaaccatt tttaacggtg gcgcggtgcc tggctggtaa ttctcactca
     4741 tgccgcgccg gacgatttat ttttctggcg cggcgacggg aatccattga aatcaaaatc
     4801 accgatgaca gaatcagcag cgttcccagc cagtccggta atgtgaacgt gatccccagc
     4861 aacagcaaag agagtagcgc gctacttaat ggttctgcac agctcaaaat gctggctttt
     4921 ggaccgccaa ttaattgtgc tcctttcagg tacagactaa atgtcaggga cgtaccaatg
     4981 accaccaaat aaaaaaacgc cagaatcaaa ctgccgttaa tgacaaagtt tgttccttgt
     5041 ctggcataaa aaggcaacag aatcagaccg ccaatcagca tactccagcc gacgactggt
     5101 aacgtgccat agcgggcaat tagcgttgag ggataggtgg tatagaatgc agcagcaaat
     5161 gccgaggcaa tgccccagaa caacgcggca ggagagatcg ataatgacgt cggattaccg
     5221 tgtgtcacca ataaaaaagt cccgaccagc gatgtcaaaa tagcgcagaa aaccagaatg
     5281 cccgggcgcg atttacgcac cagtgagaac caggcgacga taatcgtcgg tgagaggaat
     5341 tgcagcaccg ttgccgtggc tgcgttcgat ttttcgatgg ttagcaaaaa agtgagctgt
     5401 acagttagcg cgccaaccac ggaaaaaatc agcaggctaa tggcatcttt atgattgtta
     5461 ataatagaaa agattttatc gccatgaaca aatgacagcg tcagtagaat caaaccggcg
     5521 aatatcaaac gcgtcatagt caaaaactgc gacgacatct ggctttgctc catgatgtat
     5581 tgcgcgcaga cccctgaact tccccacaac acggcggcaa tcagaacgtt cagcatcccc
     5641 tttctggtgg aacccatttt tccctctgca tactgttttg tcgtttatgt atgcaggcat
     5701 gatagcaaaa atggcgagga tggctctgtt tgcgccacgc cgatttttct tagcccagac
     5761 tggtgagcta aatatcttta ataaacagca ggcaaatcat cgcaataccc aacatcccta
     5821 tcgccagcca gaacaacgca tggtagctcc agatttcaac cataattccg tcaacagagc
     5881 cggcgataat ccagccgacg cgtgaagtat ttgcatataa cgttgtcgca gagcctattt
     5941 tttcaggcat caagtcctga aaataaagca tgccgatacc acagagaata ccaaggaaga
     6001 tggcattaag aatttgcaat tccagctcaa ccgccggagt cgtcgccatg agtacgctgg
     6061 cgtaaaaaca cattccactc acgatagcaa tgagcattaa tagtcgcttg ccaatacgtt
     6121 tcatgtaata gcctgcgatt aacatcatcg gaatttccag accggcagcg ataccaatca
     6181 tttctccagc cagtttatcg gttagatgca gttcatcaat aataaatagc ggcatattta
     6241 tcatgtagag attattcgcc gcccacatca ttgaacagac cacaaaaagt agccgcgtat
     6301 cccgcttcct gtgggtggag ggtaaaattt ctacgggttg ggtaacgaca ggaatatttc
     6361 tttgtattga tggcaaaaac aaccagacta tcagtccgca aacaacaaat gcgatggcag
     6421 cggtgagata catcacttta aaactaaatc ccattgccag ttcataagcg agcggtggcc
     6481 cgataaccca ggcaagcgag atctgagcac gtaaaaatgt actgaacatg accgtctcac
     6541 ggcctgttct gtcggcgtgt tcacgggcga gggcgaacat ttgcgggttt gcggtggaag
     6601 caaaactact cagaagtacg cccgttgaga ggagaatgaa gtagttgcga ttccacgcaa
     6661 aaagcgtgca ggccagcact ccaaataagc aacatagcag aatcagtaat ttacggtcgc
     6721 cttgtttatc ggagtgcctt gccagaaatt gactgaccag aattcccata atagcgctac
     6781 cggtgaagaa aaaacctacc attataggac gggctttcag ttcatctgcg aggaatatac
     6841 ttagggtagg agtctgaaga gcgcccgcaa tacccgtcag aaaggcgaca agtaaaaatg
     6901 ccgcggcagt gaggtcaagt atttttgatg gagtggtagc cgttttttgc attcttctga
     6961 atcaccgggc gacaaaatat aactgagtta caaataagta ccagtcgaat gagtattgta
     7021 ttaagaattt ttgagtatcg ctgatacaac cagaaaacaa tgctagcgca atattatagg
     7081 gccagcaatt gagattatta gaaaa
//
LOCUS       DAPGWB010000202         7039 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.204, whole genome shotgun sequence.
ACCESSION   DAPGWB010000202 DAPGWB010000000
VERSION     DAPGWB010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7039
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.204"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            30..935
                     /locus_tag="RHX79_004204"
     CDS             30..935
                     /locus_tag="RHX79_004204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005100755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDV2199309.1"
                     /translation="MLIVSPSVVASEKAHELYDSIYGGKPAPDVINTLHKMAESGDID
                     AQSLLGWEYYQPRYDTKPDVQEAIKWFELAAKQGDREAPLALGGIYYDGEQVRVDYAK
                     AYALFNQAAQHGGNLAWSRLGIMYANGQYVEVDCKKAKEYLDKGVHIYGGPEDFLATC
                     RKDMIDRKTVDDTLPVITVTRSGMRDNFLDKGFSCMDSLFATTNKLGEVANLRVTFSI
                     RRPSGKEINQTVGFAPFGLNRLNISFTDYLFGSFTSNSSLILYKPEFERKSCATVRTT
                     IVAATATINGKDVELLKAGAIEQKW"
     gene            complement(991..1533)
                     /locus_tag="RHX79_004205"
     CDS             complement(991..1533)
                     /locus_tag="RHX79_004205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000227782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV2199310.1"
                     /translation="MVDKHEEITLPIVLSCNYQSDITYPGQKQFDCGNPVIDKFVRAS
                     LKKSVRNSDCAAKALIDRQSGELIGICTFTAYSLEKQRVSGVLQGSQPSEIGVVRLVM
                     LGVARKYQKRGFGQDLLCDFFEHVKIIHQALPIKGVYLDADPAAINFYARLGFVQLSA
                     TPNAFGAVPMFLAIQHILAA"
     gene            complement(1517..1828)
                     /locus_tag="RHX79_004206"
     CDS             complement(1517..1828)
                     /locus_tag="RHX79_004206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706319.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HDV2199311.1"
                     /translation="MPGKTATLPDVDKTLKNARVELKTSPDAKNKLREAAQAVGVDLS
                     AFILSAAMERAESVLDNQRRRELSNQSWELMNQLIAEPAQPTLALKALMKRKNSDGRQ
                     A"
     gene            complement(2013..2903)
                     /gene="cyoE"
                     /locus_tag="RHX79_004207"
     CDS             complement(2013..2903)
                     /gene="cyoE"
                     /locus_tag="RHX79_004207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HDV2199312.1"
                     /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV
                     GVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLW
                     FGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDS
                     GAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAV
                     ATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALS
                     VMMSVDFMVPDSHTLLAAVW"
     gene            complement(2915..3244)
                     /locus_tag="RHX79_004208"
     CDS             complement(2915..3244)
                     /locus_tag="RHX79_004208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HDV2199313.1"
                     /translation="MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPA
                     VILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNL
                     NYNMMMH"
     gene            complement(3244..3858)
                     /locus_tag="RHX79_004209"
     CDS             complement(3244..3858)
                     /locus_tag="RHX79_004209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HDV2199314.1"
                     /translation="MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILF
                     ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWL
                     ALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL
                     MVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM"
     gene            complement(3848..5839)
                     /gene="cyoB"
                     /locus_tag="RHX79_004210"
     CDS             complement(3848..5839)
                     /gene="cyoB"
                     /locus_tag="RHX79_004210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002444673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HDV2199315.1"
                     /translation="MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYL
                     WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI
                     FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL
                     GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAP
                     GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI
                     NLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH
                     FFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFS
                     VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE
                     TWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALG
                     ILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHERDAFWE
                     MKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIIT
                     WIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLKNGN"
     gene            complement(5861..6808)
                     /gene="cyoA"
                     /locus_tag="RHX79_004211"
     CDS             complement(5861..6808)
                     /gene="cyoA"
                     /locus_tag="RHX79_004211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit II"
                     /protein_id="HDV2199316.1"
                     /translation="MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI
                     LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF
                     LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP
                     VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM
                     KFKAIATPDRAEFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD
                     VINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH"
BASE COUNT         1912 a         1760 c         1755 g         1612 t
ORIGIN      
        1 tgttaactaa aagaatatta ttttctgtaa tgctgatagt ttcaccaagc gtggtggcca
       61 gcgagaaagc gcatgaattg tatgacagca tatacggtgg taaacctgct cccgatgtta
      121 taaatacact gcataaaatg gctgaatcgg gagatatcga cgcgcagagc ctgttaggct
      181 gggaatatta tcagcctcgt tatgatacca aacctgatgt tcaggaagcg attaaatggt
      241 tcgagttagc ggctaaacaa ggtgacagag aagctccgtt agcgctgggg ggtatctact
      301 acgacggtga gcaggtgcgg gtggattatg ccaaagcgta tgcactattt aatcaggccg
      361 cgcagcacgg tgggaattta gcatggtcca ggttgggcat tatgtacgcc aatggtcagt
      421 atgttgaggt agattgtaag aaagcgaagg aatatcttga taaaggtgtc cacatttatg
      481 gtggcccaga agactttctg gctacttgtc gaaaagacat gattgacaga aaaacggttg
      541 acgatacgtt acccgtgatt acggttaccc gttctgggat gcgagataat tttttagata
      601 aaggtttttc ctgcatggat agcctcttcg ccaccaccaa taaattaggc gaagtggcca
      661 atcttcgcgt gacattcagc attcgtcgcc catccggtaa ggagattaac caaacggttg
      721 gcttcgcgcc tttcggttta aaccggctga atattagctt tactgattac ctatttggtt
      781 catttaccag taattcgtct cttattcttt ataaaccgga atttgagcga aaatcttgtg
      841 caactgtaag gaccacaatc gttgccgcaa cggcaaccat taacggcaag gatgtggagt
      901 tgctgaaagc gggggcaatt gaacaaaagt ggtaacgctg ctcagccccc ggctgaggca
      961 aaacttgccc tggcgggtgg cgataataat ctaagccgcg agaatatgct gaatcgccaa
     1021 aaacataggt acagcaccaa aagcatttgg tgtcgctgaa agctgaacaa agccgagacg
     1081 agcataaaaa ttaatggcgg cagggtcagc atcaagataa acccctttaa ttggtaatgc
     1141 ctggtgaatt atttttacat gttcaaaaaa atcacatagt aggtcctgac caaagccccg
     1201 cttttgatac ttccgtgcta cccccaacat gactaatctg acaacaccaa tttctgaagg
     1261 ttgtgaaccc tgaaggacgc cagaaacgcg ttgtttttcc agcgaatatg ccgtaaaagt
     1321 acagatgccg atcagttcac cactttgtct gtcaataagt gctttagccg cacagtcgct
     1381 attacgcaca cttttcttta gcgatgcgcg tacaaattta tcgataacag ggttaccgca
     1441 atcaaactgt ttttgcccag gataagtaat atcagactga taattacagg agaggactat
     1501 gggcagagta atctcttcat gcttgtcgac catcgctgtt tttccttttc attaacgcct
     1561 tgagggcgag cgtcggttga gcaggttcag cgatgagttg gttcatcagt tcccagcttt
     1621 gattcgaaag ctcacggcga cgttggttat caagcacact ttcggcgcgt tccatagcag
     1681 cgctcaaaat aaaagcgctt aaatctaccc caacggcttg cgcagcttca cgaagtttgt
     1741 ttttggcgtc gggactagtt ttgagttcga cccgcgcatt tttcagcgtt ttatcgacat
     1801 cgggtagagt ggctgttttt ccaggcatta tgacctcttt gattaactga atgaaatcgt
     1861 agggagtcga tctcatacat aatacggcta tcaaccgtat gattaattta tgttcatctg
     1921 ctcactctgt caagatatac ggttattagc cgtatctctg atctcagaca ataaaaaagg
     1981 tgccgtagca cctttttaat agagaggttt tgttaccaca cagcagccag cagcgtatgc
     2041 gagtccggta ccataaaatc aacggacatc atcaccgaga gggcagtgat ggcgatgata
     2101 gagaagccga acagcttgcg cgcccagatt ctgtcatcag caactttata accgcgcaga
     2161 gccataccta accaccagac gctaaccgcc gcggcgacca ccagatattt atatccagcg
     2221 taaccgccaa gagagagcat cagcgtggca acggcaaagg cgatgatata cagcgtgatg
     2281 tgattcttcg ccaccgaaat gccttttacc actggcaata ccggaatgtt tgccgcctgg
     2341 taatccttaa agcggaaaat ggcgatggca taggagtgag gcatctgcca caggctgaag
     2401 atagccagca ggatcgctgc gccgctatcg aactcgccgg ttactgcaca gtagccaatc
     2461 accggcggcg cagcgccgga gagcgaacca atcaatgtgc cgtagactga gtggcgtttc
     2521 atgtacaggc tatagacgcc gacataaacc acaaagccca tcacccccag ccagcaggcc
     2581 agcggattcg cgccaaacca cagcagcata aagccagcaa tacccagcaa ggtggcgtac
     2641 accagcgaga cagcaggaga gatcaggcct ttaaccagca cccgattctt cgtcctttcc
     2701 atctttctgt cgatatccct gtcgatgtag ttgttaaaca cacaacccga cgccacaacc
     2761 agtgacaccc caaccagcgt gtagataaac aggggataat caatgctgcc ctttgaggcc
     2821 agcaggaatc ccccaatcac cgagatcagg ttgccaaaga tgatgcctgg tttcgttact
     2881 tgcaggtatt gcttaaacat cataaccgcc gctcttagtg catcatcatg ttgtagttga
     2941 ggttccacat aatccagatg gagcctacaa ccaggatagc gatgattagc acggtgaaga
     3001 caaacgccgt catgttccag ccttcatctg atttggtatt catgtgcagg aagcacacca
     3061 gatgcaccag aacctgtacc actgccattg ccaggattgt tcccagaatt acggccggag
     3121 aggcagcccc tgtcatcacc atccagaacg gaatcaccgt cagaatgatc gacaggataa
     3181 agcctgtcat gtaggttttt acgctgccat gggacgcgcc gctgtgatcg gtagaatgac
     3241 tcattacatc gcccccatca gataaacaac agtgaacaca cagatccaaa ccacatccag
     3301 gaagtgccag aacaggctca ggcacatgat gcgggtacgg ttagtgctgg tcaggccgcg
     3361 acgagcgatt tgtaccatca gcaccgccat ccagataaga ccggaagtga cgtgcagacc
     3421 gtgcgtgccg accagcgcaa agaacgctga caggaagccg ctgcgatccg gacccatgcc
     3481 gttaacaatc aggtgatgga attcgtagat ttccatcccg ataaatccgg caccaaacaa
     3541 ccaggtcaac gccagccagg agataacctg gcttttgttg tttttgtaca tggcgatagc
     3601 cgccatgccg taggtgatgg agctgaacaa cagcaagaaa gtttcaacca gaacgaacgg
     3661 cagttcgaaa atgtccttac ctgtcgggcc gcctgcggtg ccgttcacca gaacggcata
     3721 ggtagcaaac aagattgaga acagaatgca gtcgctcatc aggtagatcc aaaatccgaa
     3781 gattttggtt ccgcctgcat cgtggtgccc gtgttcgtgc gcgtgggcag tcgcgtgcgt
     3841 caaagtatca gttgccattt ttcagccctg ccttagtaat ctcatcgaaa tgctggtttt
     3901 ccagtttttc gatttctgcc accggcacgt agtaatccac gtcctcgtcg aagcttttca
     3961 cgatccaggt gatgatcatg cctgcgaagc caacaatcgc cagccaccag atatgccaga
     4021 tcatggcgaa accgaagatg gtggagaaag ctgcaatgac gatacctgca ccgctgtttt
     4081 tcggcatatg aatttcttca tagtggtcag gctttttata cgcttcgcct ttctctttca
     4141 tttcccagaa tgcatcacgc tcgtgaacgt gcggcacaac ggcaaagtta tagaacggag
     4201 gcggggaaga ggttgcccac tccagcgtac ggccacccca cgggtcgcca gtcaggtcac
     4261 ggttctggtc gcggtcgcga atagaaacgt acatctgaat aacgaggcag agaataccca
     4321 gcgcaatcag tactgcaccg ctagctgcaa tcatcagcat ggtgtggaac tgcgggtcaa
     4381 tctgctggct caaacgacgg gtcatgccca tgaagcccag cgcatacagc ggcataaagg
     4441 caacgaagaa gccgatgatc cagaaccaga acgcgcgttt accccaggtt tcattcagtt
     4501 tgaaaccgaa ggctttaggc caccagtagg tcatccctgc gaagcagccg aagaccacgc
     4561 cgccgatgat cacgttatgg aagtgcgcaa tcaggaacag gctgttatgc agaacgaagt
     4621 ccgcgcccgg tactgccagc agcacgccag tcatcccgcc caccgagaaa gtgacgataa
     4681 aaccgatggt ccacagcatc gcagaatgga acacgatgcg gccctgatac atggtgaaca
     4741 gccagttgaa gatcttcacc ccggtcggga tggcgataat cattgtggtg ataccaaaga
     4801 aggcgtttac gttcgcgccc gcacccatcg taaagaagtg gtgcagccaa acgatgaacg
     4861 acagcacggt gatacagacg gttgcccata ccagcgaggt ataaccaaac agacgtttac
     4921 gcgagaaggt tgccgcaatt tcggagaaca caccgaaaac aggcaggatc aggatgtaaa
     4981 cttccgggtg gccccaggcc caaatcaggt tgatgtacat catcatgttg ccacccatat
     5041 cgttggtaaa gaaatgggtg cccagatagc gatccagggt caacaacgcg acggtaaccg
     5101 tcagaattgg gaaggaagca ataatcagta cgttcgcgca cagtgatgcc caggtaaata
     5161 ctggcatctt gaacatggtc atgcccggtg cgcgcatctt cagaatggta acgaagaagt
     5221 tgataccggt aagcgtcgta cctataccgg atagctggag actccatatc cagtaatcga
     5281 caccgactcc cggactgtac tctattcccg atagcggtgg ataggccagc cagccggtct
     5341 gcgcaaattc gcccacgccg agagaaacgt taaccagaat cacaccaaca acagtaaacc
     5401 agaagcttaa gttgttgagg aacgggaacg caacgtcacg cgcgccgatc tgcagcggaa
     5461 ccaccaggtt catcagaccg ataacgaaag gcatcgccac gaagaagatc ataatcacgc
     5521 cgtgcgcggt gaagatctga tcgtagtggt gaggtggcag gaagcccgct tcgcccgccg
     5581 aggcaagagc ctgctggcta cgcatcataa tggcgtcagc aaaaccacgc agcaacatca
     5641 caatcgccac gatgatatac atgataccga ggcgtttatg gtcgacggag gtcagccact
     5701 ctttccacag gtaggtccac ttaccgaagt aagtgatcag gccaacgagc gccagacctc
     5761 ccaaaataat gccagcgatc gtaaccatga cgataggttc atggaacggg actgcatcaa
     5821 gtgataattt tccgaacatc tttattcttc ctcaacccct ttaatgggcg gattccgcgt
     5881 ggctcatgtc catgccttcc ataccttcgt gtgcactgtg ctcaccttct ggctgggtca
     5941 tgtccatgct cttaccgtga gccataaact tgttaatcac atcggcaaac aagtctggtt
     6001 tcacgttgga gaaatattcc acctggttgt attcgctagg cgcggccagt ttttcgaacg
     6061 cagccatgtc agacatggtg ttcggcgact gtttcgcttt tgcgacccat tggtcgaatt
     6121 cggcgcgatc cggtgttgca atagctttga acttcatgcc tgagaagccc ggcccgctgt
     6181 agctggcgga gataccgtca taagtaccgg gttcgttggc gatcagatgc aggcgagtct
     6241 gcataccggc catggcataa atctggctac ccagacgcgg aatgaagaag gagttcatca
     6301 cggagttgga ggtcactttg aagtacaccg gagtgttcgc cgggaaagcg atttcattca
     6361 cggtagcaat gccctgttcc gggtagatga agaaccattt ccagtccatg gaaaccactt
     6421 cgatggtaat gggcttctcg tcgtgtgcca gcggcttgct aggctcaaga gcgtgagtgg
     6481 ttttccaggt cagtaccgca aggaagatga tgattaagat aggtaccgtc cagaccacag
     6541 cttccacttt attggagtgt gaccagttcg ggctgtactt agcatcttta ttgctcgcac
     6601 ggtacttcca ggcgaaacca acagccatca agattgcggg aataacgaca atcaacatca
     6661 ggccaaatgc cgtcagtatc agtgaacgtt gctccagacc aatctgtcct ttgggatcta
     6721 acagcgcaga attacagcca ctgagcaata cagtgcctgc aaataatgac aaccatccca
     6781 aacttttatt gtatttcctg agtctcattt aacgacctca attccacggg atctggtggc
     6841 gtttaaagtg tgtgggcatt ttacgggaag gttacattac tgtaaacatg attaaattcc
     6901 tgttacttgg atttggctgt caggtcacat atgttgcaaa acatatcaag ttgattttaa
     6961 gaagctgttg caaaagggcg ttataacgaa agggaagtgc agaaggagtt tggacgggca
     7021 attggtataa ccaatgcga
//
LOCUS       DAPGWB010000203         7013 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.205, whole genome shotgun sequence.
ACCESSION   DAPGWB010000203 DAPGWB010000000
VERSION     DAPGWB010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 7013)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7013)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7013
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.205"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(28..2811)
                     /locus_tag="RHX79_004212"
     CDS             complement(28..2811)
                     /locus_tag="RHX79_004212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310126.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDV2199317.1"
                     /translation="MRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLGNGLRYMI
                     YPHAHPKDQVNLWLQIHTGSLQEEDNERGVAHFVEHMMFNGTKTWPGNKVIETFESMG
                     LRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAERGVI
                     TEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQRWYQP
                     NNMTFIVVGDIDSKEALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDKENRV
                     NGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTARSVK
                     IAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWLKNAV
                     DQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQLRKNQ
                     DAFWEQMVNNELAAKKALSPAAILALEKEYANKKLAAYIFPGRNLSLTVDADPQAEIS
                     SKETLAENLTSLTLSNGARVILAKSAGEEQKLQITAVSNKGDLSFPAQQKSLIALANK
                     AVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLINQRIT
                     HSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIVQFTA
                     ADALAADRQLFSSPADITFVIVGNVSEDKLVALITRYLGSIKHSDSPLAAGKPLTRAT
                     DNASVTVKEQNEPVAQVSQWKRYDSRTPVNLATRMALDAFNVALAKDLRVNIREQASG
                     AYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQELNEYQ
                     QNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVKQYLS
                     HPVNTYTGVLLPK"
     gene            complement(2868..5240)
                     /locus_tag="RHX79_004213"
     CDS             complement(2868..5240)
                     /locus_tag="RHX79_004213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDV2199318.1"
                     /translation="MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVN
                     GNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPY
                     QNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFG
                     RFNGGVIDAKIKRFNADDSKVKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYYSPD
                     FKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVAGRAQYKNVIDTALS
                     KFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLR
                     TTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQ
                     KFAVGNVSHQPYFGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGSLGIDN
                     YTLYMADHISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFADQTSMITAGYNRY
                     YGGNILDMGLRDIRNSWTESVSGNKTLTRYQNLKTPYNDELAMGLQQKIGKNVIARAN
                     YVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFNLSFELAEPLHISQVDINPQ
                     IVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFT
                     HQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSW
                     TPQFLKQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF"
     gene            complement(5278..6963)
                     /locus_tag="RHX79_004214"
                     /pseudo
     CDS             complement(5278..6963)
                     /locus_tag="RHX79_004214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416013.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
BASE COUNT         1815 a         1603 c         1580 g         2015 t
ORIGIN      
        1 gccaacgatg tgttgacggg gctgttatta ttttggcaat aatactccgg tataagtatt
       61 taccggatga gaaagatatt gtttaacggc agtgttaaca ttctctaccg tcatttgttt
      121 caacaattgc tcctgctcag tccatgctgc aggatcgtca tattgaataa gactatttac
      181 aatagtgttc gctaattgtt gaacgctacg ctgttggata tcgaggctgc gctgaacgtt
      241 ttgctggtat tcattcagtt cttgctcact gatcccttta gccagacgct taaccatcac
      301 ttcattcgct aacgttaaca gttcatcatg tcgttctggt tgacaagtaa aagccagcaa
      361 atgactgata tctttggcct gaggatcaac cgagaggcga gaagaaacgc tgtatgctcc
      421 agatgcctgt tcacgaatat taacacgtag atcttttgcc agtgcgacgt taaaagcatc
      481 gagcgccata cgcgtcgcca gattaacagg tgtccgggaa tcataacgct tccactgtga
      541 aacctgtgcc acaggttcat tttgttcttt tacagtaacc gatgcgttgt ccgtcgcgcg
      601 agttaatggt ttacctgcgg ctaatggcga atcagagtgt ttgattgatc ctaagtaacg
      661 cgtaattaac gccacgagtt tgtcttctga gacattaccg acaatgacaa acgtgatatc
      721 cgctggagat gaaaacaact ggcgatcggc agccagcgca tctgcggcag taaactgtac
      781 aatctgattt tcttgcagta atttcgtgcg gtcatcagca tagcgcgtct catacatctg
      841 ctgggcgaat ttctccgctg gacgctggtc gagcgttttc aacgcctgaa tttgagcatt
      901 ttgtagcgat gcccaaatat tgtcgttaat cgtgctgtgg gtgattcgct ggttaatcaa
      961 ctgaaaacca ggttcagggt tattagtccg cgcgctaacg gagagcaacg tattcatgcc
     1021 actgacttta ctgctcatgg ttaccgaatt ttccgcactc cagcgtttca ggctggaaga
     1081 ggagagctca ccaacgccgc ttccgcttac tgctttattt gccagcgcga taagtgattt
     1141 ttgctgcgca gggaaactta aatcgccttt attcgatacg gcagtaattt gtagcttttg
     1201 ctcttcaccc gcggattttg caagaataac cctggcacca ttggaaagtg ttaatgatgt
     1261 cagattctca gccagcgttt ctttgctgct aatttccgcc tgtgggtcag cgtctactgt
     1321 taacgataaa tttctgcctg ggaagatgta agccgccagc tttttgttgg cgtactcttt
     1381 ttccagcgcc aggatagccg caggagacaa tgcttttttg gcggcaagct cattgtttac
     1441 catttgctcc caaaatgcgt cctggttctt tcttaactgc tgccattttt ccgccagact
     1501 ttgcacggta atttgctgcc acagacgttt cgaaagttga tatgtctctt ccggcgacaa
     1561 gaacggcgta ttatttaatg agctggatgc caggcgactg gtcagcatac gtaaatcacg
     1621 ttcagcttgc tgatcaaccg catttttcag ccaggtgagg cgggtagatt tgacatcatc
     1681 gagttcttca gcagaaaaac catgctgatc aatggttgcc aactctgcca ttaatgcatt
     1741 cgcagcatcc tgcatattat cgtctcgtgc atttacacgg aaaaacagcg actgataatc
     1801 gggtgcaatt ttaacgctgc gcgcagtgcc gccagaaata gtcttcaact cgcccgactg
     1861 tatgcgttcc tgcagacgtt gattgaacag ctgaactaac atgctccatt cagcttgttc
     1921 gataaagctt tgctcatcgt tcacttgtac cattggcagg cgataataga gtgcgatgcc
     1981 gttcacccgg ttttctttat cattaatgat attaaagcgc aggtggtttt cggcttttgt
     2041 cggccagacg cgattttcag ctgctttgtt agccggaagc ttacttaaat tatcctttat
     2101 cagcgccagc gcttctttac tgtcgatatc gccgaccacg ataaaggtca tattatttgg
     2161 ttgataccag cgttgataaa attggcgcaa ttgtgccggt gtgaccgtgg cgacagtatc
     2221 catcaggccg ataggttcac ggtctaaatt acgggtatta gccagcagga aagggcggcg
     2281 cgcctgagag gtgcgccatt tcgcatcctg atgggcacgc cattcctcag taattacgcc
     2341 acgttcagcg tctacttcga gtttttcaaa ggttgcggca ttactccatt cactgaagat
     2401 tgccatcact tgttgcagat tttgtttctg cgtagtcggc aaactcacct gatacaccgt
     2461 ttcgtcatag ctggtatagg cattaacatc gcgaccaaaa cgcaggccca ttgactcaaa
     2521 tgtttcgatg actttattac ccggccatgt ttttgtgccg ttaaacatca tatgttctac
     2581 aaaatgagcc acgccgcgct cattgtcttc ttcctgcaat gaaccggtat gaatttgcag
     2641 ccataaattt acctgatcct ttggatgagc atgcggataa atcatatatc gcaagccatt
     2701 gcccagttgc ccggtaatta acttttcatc ctgcggtaag gcggcggcaa tcagccgccc
     2761 ggggagcaac agagttgcca ctaacgtcag taagaaacag aggtttctca taattatctc
     2821 catgcgaaaa ccgggcgaat ttacccggtt aagtaaaatc cgaactatta aaatttcatg
     2881 ctgacatcaa gccagaaagt acggccactg gcgtaggtcg ccacaccggt gttcgttgta
     2941 tcaacagcgg ttttgctatc caatacattg agaatatcgg cactgatcgt caggttttgt
     3001 tgtttcagaa attgtggcgt ccaggacaag cgggtgtccc aggtcaggct gctatccagt
     3061 ttttcgtcaa catactgctt gtaatctgaa tattcgctga tgtattgcgc atttgtctta
     3121 ccaaggataa tgcgagcttt acgcgcttct tgccaggcca gcgtattcgc ccacactaac
     3181 ccgctcggtt gatgcgtgaa atccatgttt aaggagatct ttaatgggtt attaaaatct
     3241 gccactggaa cgctatcgta agaaaccaga ttaccgttat aaaccacctg gttatcaccg
     3301 gtattgctct cctcataacc attgtttaac gacaagttgc ccttgctctt gatatagcta
     3361 aagacaattt gcgggttaat atctacctgg ctgatatgca ggggttcggc cagttcaaaa
     3421 ctgaggttga acgaatgcgt ttttgttttg ccgtcgttgt tatattcagt aatggtggtt
     3481 ttagtcgcgc tgtcggtacg actgcttttg ctgatttgat catgcgcttc acggtaaaca
     3541 tagtttgcgc gtgcaataac gttcttaccg attttttgct gcaatcccat tgccagttca
     3601 tcgttataag gcgttttcaa attctgataa cgcgtcaggg ttttattacc tgataccgat
     3661 tccgtccagc tattgcggat atcacgtaat cccatatcaa gaatattccc gccatagtaa
     3721 cggttataac cggcggtaat cattgaggtt tgatcagcaa aaatatccca ttccgtcata
     3781 aagcgcgggg agatattgtg gtttgacaga tagttgtcat agtcataacg cacaccgggc
     3841 attaacgaca cattccgcca gctaatgtga tccgccatat acagcgtgta gttgtcaatt
     3901 cccaggctgc ctttaccttt atggtaaatg gtatggttag ttttctttcc tgcagcatta
     3961 atcacatagg attcagactg gttatggcgt tcagtccacg catcggaata gatgtattcc
     4021 gcgccgaagt agggttgatg cgaaacatta cccacggcga atttttgcca gtccaggcgt
     4081 gttttgaagg tgtaattatc tacagcctgg gaaatgtgtc ctaatccgcc acgggtgcaa
     4141 cgccctgtaa tatcaccata tgtacatgaa agttcggtgt accagatgtc atgatcgtga
     4201 cgggtataat cactaatatg atcccaacca acggtggtac gcagtttggc ccatgcgagc
     4261 tgcgtatcca tatcccatgc cagaccgtag gatttattac ccatttcgcg atcagactgc
     4321 gggaaggtgc tggtattata atcacggctg gagccggtat attttaaggt taaatcgtgg
     4381 gtaaagcggt cgctggcaaa ccaggtaaat ttgctcaatg cagtatcgat aacgttttta
     4441 tactgtgccc gaccggcgac aatgccgtca ttcgaaacat aatccgcgcg ggtgatatca
     4501 gactggcggc gcgataaacc ggcggtaacg ccgaagttat cagcgagttc ctgattaaac
     4561 gacaaggtat aaaagttctt tttaaaatct ggggagtaat aagtacttcc tgaagagcct
     4621 tgattaaatg cgctcttgtt attctcatcg atatgcgatg ttaaccagtc cgaacgcgta
     4681 gtgcgataac ccaatttcac cttgctatca tcagcgttga agcgtttgat ctttgcatca
     4741 attaccccgc cattgaagcg accaaattca accggcacaa aactgtcata aagcgtcaca
     4801 ttgtccagta agctgacatc aagataatac ccctgtgaca tcccgctaat attggttgca
     4861 ctactggcat cggactcatt cgctgggttc aggttattag ttgcactaat accgtcaatc
     4921 aaataggcat tctggtaggg cgacgcaccg tgaatagaga ttttctcagg gcgaatatct
     4981 ccctggttca acgaggtact ttgcgttgaa tccatgcgta ccgcagggtt ggttctcagc
     5041 agatcgctga tattgccatt cccggtcggt aaacgctcga tgctttcact ggtgtaatgc
     5101 gtgttgccgt ttacgggtac agggacagga gcatagaccg tcatctcttc aaaaaaatgc
     5161 atgtacatgt ttttgtcatc gacggcctgc gccacatcag cgccacataa aatgacgcca
     5221 ggaataagaa ctcgcttcat ttatttatat ctccgtacag cagggctttt attgttgtta
     5281 taaaaccgtg ctaatgtcac aaatatcatc ggccaggttc cagacaccgg gttgatgtgt
     5341 aaccataatg acgccgcttg tgggtagttt ttcacgcact aaacgcagta agcggatagc
     5401 ctcttgttcc tcaagatgag aggtagtttc gtcaagaaat atccatttcg gacgtcgtaa
     5461 aattaatcgt gccagggcga tacgttgttt ttcgccgctg gaaagaatat ctccccagcg
     5521 atcgtggtca tgaatacgcg cagccaattt cccaagacca acctgatgca gtacttcgct
     5581 caacgattta tcgtctacgg gcaggggaag tgctttacaa ataatctctt tcagtaagcc
     5641 ggttttgatt aacggtgttt gtgacacata ccaactgtca gcaggagaaa aaatatcacc
     5701 tttaaaccac ggccagcagt gggataatgt tttaagcagt gtggtttttc ccgcaccaga
     5761 gtagcctttc agtaatagcc atttgcctgg cgaaacatga aagttcaagt tctctaatat
     5821 gatcttatta tcaggcgtac gaatactcgc attagccact tgtaccgcat gttggcaatt
     5881 tttaggctta ttcgtagggc gctgttcagt gagttgatgg aactcataca agcgatcgat
     5941 aaccgcagcc agttcagcaa gttcgtcata tttataaata aaccagctta aattgttcga
     6001 tactagcata aatgcctagc gcgatttcat cagtccgccc agattgatct gcccgctaat
     6061 aaactgcggc aataacagaa agtagggaag aacgctaagc gagcgcgaat aaatattttg
     6121 ccagtaatca agccaccgct gacgattcat taaacgatgc cagttctctt taatggtatg
     6181 aaaattgtcg ctcaactcct ggcgttgtag agactcagca ttgcttagcg caatcagttc
     6241 tgcctgctta ttatgctgca caagattagt tcgaaatgtc gcttcgctac gttgtttttc
     6301 cacattaagc ggacgaatac gcttaccaac cttatgggta aataaagttc caccgatcac
     6361 aatgagcaca acggtataga ccatataccc ctggatattc cattctgttc caccaacagt
     6421 gaatgagagc gtacccgcgc tttgccaaag aataacggta aaggtgatca gcatgctaag
     6481 tgactggatg aagccaaatg aaagactgag cgttttgctg attagtaaga gaatgtcttc
     6541 agcgatacgt tggtcagggt tatctgtatt tttatgctcg ccgtagatct gcgtgaagta
     6601 gtagttttta tctgcaaacc agcgattaag gtagtaatct gttaaccatt cgcgccagcg
     6661 aatagtcagc agtttaatta accatgtttt gttcacggat attaatacaa agatccccag
     6721 cagggcaggg aaccaaagga caagctgcca aagcttatcg gtttctttct ggcttagcgc
     6781 attgaaaaaa tcattattcc agtcgtttaa ccagacctga attttaacca cgccaaggat
     6841 catggcgagg ataataatga ttaacagcac tgaagtttta ttattcttac gcagccaaaa
     6901 gggcttcaac agacagagat actttgctat caacatacaa aacgtaatgg gaatggttat
     6961 cattagcgaa aattgattgt gccatccaat gattatctat ggcaatgatt tac
//
LOCUS       DAPGWB010000204         6988 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.206, whole genome shotgun sequence.
ACCESSION   DAPGWB010000204 DAPGWB010000000
VERSION     DAPGWB010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6988
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.206"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            497..1486
                     /gene="araF"
                     /locus_tag="RHX79_004215"
     CDS             497..1486
                     /gene="araF"
                     /locus_tag="RHX79_004215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter substrate-binding
                     protein AraF"
                     /protein_id="HDV2199319.1"
                     /translation="MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEW
                     KFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKAR
                     GYDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAV
                     MAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPE
                     VKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLL
                     PSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK"
     gene            1556..3070
                     /gene="araG"
                     /locus_tag="RHX79_004216"
     CDS             1556..3070
                     /gene="araG"
                     /locus_tag="RHX79_004216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter ATP binding protein
                     AraG"
                     /protein_id="HDV2199320.1"
                     /translation="MQQSTPYHSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGA
                     GKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAEN
                     IYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALAR
                     NAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKD
                     GRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKALGVRTPIS
                     LAVRSGEIVGLFGLVGAGRSELMKGLFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMM
                     LCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADHHIRSLNIKTPG
                     AEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGV
                     AVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA"
     gene            3085..4071
                     /gene="araH"
                     /locus_tag="RHX79_004217"
     CDS             3085..4071
                     /gene="araH"
                     /locus_tag="RHX79_004217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026162.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter permease AraH"
                     /protein_id="HDV2199321.1"
                     /translation="MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPN
                     FATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESL
                     WIGVAAGLLLGILCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDE
                     SFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVV
                     RTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKI
                     SYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV"
     gene            4238..5038
                     /gene="otsB"
                     /locus_tag="RHX79_004218"
     CDS             4238..5038
                     /gene="otsB"
                     /locus_tag="RHX79_004218"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HDV2199322.1"
                     /translation="MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQG
                     LQLLATASDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAI
                     ARDISVQLHTVIAQYPGAELEAKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQ
                     QGKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDLTDESGFAVVNRLGGMSVK
                     IGTGATQASWRLAGVPDVWSWLEMITTALQQKRENNRSDDYESFSRSI"
     gene            5013..6437
                     /gene="otsA"
                     /locus_tag="RHX79_004219"
     CDS             5013..6437
                     /gene="otsA"
                     /locus_tag="RHX79_004219"
                     /EC_number="2.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase"
                     /protein_id="HDV2199323.1"
                     /translation="MSRLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSG
                     ETGNEDQPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPA
                     WDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPT
                     PEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKA
                     FRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLA
                     YEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLY
                     YLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA
                     NELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISD
                     LKQIVPRSAESQQRDKVATFPKLA"
     gene            complement(6444..6872)
                     /gene="uspC"
                     /locus_tag="RHX79_004220"
     CDS             complement(6444..6872)
                     /gene="uspC"
                     /locus_tag="RHX79_004220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspC"
                     /protein_id="HDV2199324.1"
                     /translation="MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPE
                     MYNQLAAPMLEDLRSVMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHKHH
                     FDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD"
BASE COUNT         1765 a         1631 c         1816 g         1776 t
ORIGIN      
        1 ttataaaacg ttttttcatt tttgcgagat ggctctcatt atacgtgttc tgttaattaa
       61 tgagcacagt gataattaat gacgaaatga atgacgtgca ttttccacat ctttgagttg
      121 cggttattac accatttcaa aaactcaacg ccaggtaatg cggcctattg actggttaaa
      181 aagaagacat cccgcatggg taccaaagac aacaaggatt tccaggctaa tcttatggat
      241 taatctgctg tgcattcgac aatttgtctg acaaattggc tttcccttat gtcttttccc
      301 gctaaattta tgcacgttct cactgtaatt ctgcgatgtg atattgctct cctatggaga
      361 attaatttct cgctaaaact atgtcaacac ggtcacttat cttttagtta aaaggtaatg
      421 ctttgttttc cgattaattt aacgaatgtc attcgttttt gccctacaca aaacgacact
      481 aaagctggag agaaccatgc acaaatttac taaagccctg gcagccattg gtctggcagc
      541 cgttatgtca caatccgcta tggcggagaa cctgaagctc ggttttctgg tgaagcaacc
      601 ggaagagccg tggttccaga ccgaatggaa gtttgccgat aaagccggga aggatttagg
      661 gtttgaggtt attaagattg ccgtgccgga tggcgaaaaa acattgaacg cgatcgacag
      721 cctggctgcc agtggcgcaa aaggtttcgt tatttgtact ccggacccca aactcggctc
      781 tgccatcgtc gcgaaagcgc gtggctacga tatgaaagtc attgccgtgg atgaccagtt
      841 tgttaacgcc aaaggtaagc caatggatac cgttccgctg gtgatgatgg cggcgactaa
      901 aattggcgaa cgtcagggcc aggaactgta taaagagatg cagaaacgtg gctgggatgt
      961 caaagaaagc gcggtgatgg cgattaccgc caacgaactg gataccgccc gccgccgtac
     1021 tacgggatct atggatgcgc tgaaagcggc cggattcccg gaaaaacaaa tttatcaggt
     1081 acctaccaaa tctaacgaca tcccgggggc atttgacgct gccaactcaa tgctggttca
     1141 acatccggaa gttaaacatt ggctgatcgt cggtatgaac gacagcaccg tgctgggcgg
     1201 cgtacgcgcg acggaaggtc agggctttaa agcggccgat atcatcggca ttggcattaa
     1261 cggtgtggat gcggtgagcg aactgtctaa agcacaggca accggcttct acggttccct
     1321 gctgccaagc ccggacgtac atggctataa atccagcgaa atgctttaca actgggtagc
     1381 aaaagacgtt gaaccgccaa aatttaccga agttaccgac gtggtactga tcacgcgtga
     1441 caactttaaa gaagaactgg agaaaaaagg tttaggcggt aagtaatttg ccggaaaaat
     1501 tcccctctgc atgatgcaga gggggtgtga acgaccagtg attcacggag acgttatgca
     1561 acagtctacc ccgtatcact catttcgcgg catcggtaaa acgtttcccg gcgttaaggc
     1621 gctgacggat attagttttg actgctatgc cggtcaggtt catgcgttga tgggtgaaaa
     1681 tggcgcagga aaatcaactc tcttaaaaat cctcagcggc aactatgcgc caaccacggg
     1741 ttctgtagtg attaatgggc aggaaatgtc cttttccgac acgaccgcag cacttaatgc
     1801 gggtgtggcg attatttacc aggaactgca tctcgtgccg gaaatgaccg tcgcggaaaa
     1861 catctatctc ggccagctgc cgcataaagg cggcattgtg aatcgctcat tgctgaatta
     1921 tgaggcgggt ttacaactta aacatcttgg tatggatatt gacccggaca cgccgctgaa
     1981 atatctctcc attggtcagt ggcagatggt tgaaatcgcc aaggcgctgg cgcgtaacgc
     2041 taaaattatc gcctttgatg agccaaccag ctccctttct gcccgcgaaa tcgacaatct
     2101 tttccgcgtt attcgtgaac tgcgaaaaga ggggcgggtg atcttatacg tttctcaccg
     2161 tatggaagaa atatttgccc tcagcgatgc catcactgtc tttaaagatg gacgttatgt
     2221 caaaaccttt accgatatgc agcaggttga ccacgacgcg ctggtgcagg cgatggtcgg
     2281 gcgcgacatt ggcgatatct acggctggca acctcgtagt tatggcgagg agcgcctgcg
     2341 tcttgatgct gtgaaagcac taggcgtgcg tacgccaata agtctggcgg ttcgcagtgg
     2401 tgaaattgtt gggctgtttg gtctggtagg agcggggcgt agcgaattaa tgaaaggctt
     2461 gtttggcggg acgcaaatca ccgccggtca ggtttatatc gaccaacagc cgatcgatat
     2521 tcgtaaaccg agccacgcca ttgccgcagg catgatgctc tgcccggaag atcgcaaagc
     2581 ggaaggcatt attcccgtgc actccgttcg cgacaatatc aacatcagtg ccagacgtaa
     2641 acatgtgctc ggcggttgtg taatcaacaa cggttgggaa gaaaacaatg ccgatcacca
     2701 cattcgttcg ctcaacatca aaacgccggg cgctgagcaa ctgatcatga atctctcagg
     2761 cggaaatcag caaaaagcca ttctgggccg ctggttatcg gaagagatga aggtcatttt
     2821 gctggatgaa cctacgcgcg gcattgatgt tggtgctaag catgaaattt acaacgtgat
     2881 ttatgcgctg gcggcgcagg gtgtggcggt gctgtttgcc tccagcgact tacctgaagt
     2941 cctcggcgtt gccgaccgga ttgtggtgat gcgggaaggt gaaatcgccg gtgaattgtt
     3001 acacgagcag gcagatgagc gtcaggcact gagccttgcg atgcctaaag tcagccaggc
     3061 agttgcctga gtaaggagag tatgatgtct tctgtttcta catcggggtc tggcgcacct
     3121 aagtcgtcat tcagcttcgg gcgtatctgg gatcagtacg gcatgctggt ggtgtttgcg
     3181 gtgctcttta tcgcctgtgc catttttgtc ccaaattttg ccaccttcat taatatgaaa
     3241 gggttgggcc tggcaatttc catgtcgggg atggtggcgt gtggcatgtt gttctgcctt
     3301 gcttccggtg actttgacct ttctgtcgcc tccgtaattg cctgtgcggg tgtcaccacg
     3361 gcggtggtta tcaacctgac tgaaagcctg tggattggcg tggcagcggg gttgctgctt
     3421 ggcattctct gtggcctggt caatggcttt gttatcgcca aactgaaaat aaatgctctg
     3481 atcacaacac tggcaacgat gcagattgtt cgaggtctgg cgtacatcat ttcagacggt
     3541 aaagcggtcg gtatcgaaga tgaaagcttc tttgcccttg gttacgctaa ctggttcggt
     3601 ctgcctgcgc caatctggct caccgtcgcg tgtctgatta tctttggttt gttgctgaat
     3661 aaaaccacct ttggtcgtaa caccctggcg attggcggga acgaagaggc tgcgcgtctg
     3721 gcgggtgtac cggttgttcg caccaaaatt attatctttg ttctctctgg cctggtatct
     3781 gcgatagccg gaattattct ggcttcacgt atgactagtg ggcagccaat gacgtcgatt
     3841 ggttatgagc ttattgttat ctccgcctgc gttttaggtg gcgtttctct gaaaggtggc
     3901 atcggaaaaa tctcatatgt ggtggcgggt atcttaattt taggcaccgt ggaaaacgcc
     3961 atgaacctgc ttaatatttc tcctttcgcg cagtacgtgg ttcgcggctt aatcctgctg
     4021 gcagcggtga tcttcgaccg ttacaagcaa aaagcgaaac gcactgtctg atgctttttt
     4081 ccacaacaat ttaacgtttt ttcccaccac agccagccgc cacaacggtt ggctgttctt
     4141 cattgcaaat ggcgaccccc gtcacactgt ctatacttac atgtctgtaa agcgcgttct
     4201 gcgcaaaaca ataagaaaag agaaggagga gagccgggtg acagaaccgt taaccgaaac
     4261 ccctgaacta tccgcgaaat atgcctggtt ttttgatctt gatggaacgc tggcggaaat
     4321 caaaccgcat cccgatcagg tcgtcgtgcc tgacaatatt ctgcaaggac tacagctact
     4381 ggcaaccgca agtgatggtg cattggcatt gatatcaggg cgctcaatgg tggagcttga
     4441 cgcactggca aaaccttatc gcttcccgtt agcgggcgtg catggggcgg agcgccgtga
     4501 catcaatggt aaaacacata tcgttcatct gccggatgcg attgcgcgtg atattagcgt
     4561 gcaactgcat acagtcatcg ctcagtatcc cggcgcggag ctggaggcga aagggatggc
     4621 ttttgcgctg cattatcgtc aggctccgca gcatgaagac gcattaatga cattagcgca
     4681 acgtattact cagatctggc cacaaatggc gttacagcag ggaaagtgtg ttgtcgagat
     4741 caaaccgaga ggtaccagta aaggtgaggc aattgcagct tttatgcagg aagctccctt
     4801 tatcgggcga acgcccgtat ttctgggcga tgatttaacc gatgaatctg gcttcgcagt
     4861 cgttaaccga ctgggcggaa tgtcagtaaa aattggcaca ggtgcaactc aggcatcatg
     4921 gcgactggcg ggtgtgccgg atgtctggag ctggcttgaa atgataacca ccgcattaca
     4981 acaaaaaaga gaaaataaca ggagtgatga ctatgagtcg tttagtcgta gtatctaacc
     5041 ggattgcacc accagacgag cacgccgcca gtgccggtgg ccttgccgtt ggcatactgg
     5101 gggcactgaa agccgcaggc ggactgtggt ttggctggag tggtgaaaca gggaatgagg
     5161 atcagccgct aaaaaaggtg aaaaaaggta acattacgtg ggcctctttt aacctcagcg
     5221 aacaggacct tgacgaatac tacaaccaat tctccaatgc cgttctctgg cccgcttttc
     5281 attatcggct cgatctggtg caatttcagc gtcctgcctg ggacggctat ctacgcgtaa
     5341 atgcgttgct ggcagataaa ttactgccgc tgttgcaaga cgatgacatt atctggatcc
     5401 acgattatca cctgttgcca tttgcgcatg aattacgcaa acggggagtg aataatcgca
     5461 ttggtttctt tctgcatatt cctttcccga caccggaaat cttcaacgcg ctgccgacat
     5521 atgacacctt gcttgaacag ctttgtgatt atgatttgct gggtttccag acagaaaacg
     5581 atcgtctggc gttcctggat tgtctttcta acctgacccg cgtcacgaca cgtagcgcaa
     5641 aaagccatac agcctggggc aaagcatttc gaacagaagt ctacccgatc ggcattgaac
     5701 cgaaagaaat agccaaacag gctgccgggc cactgccgcc aaaactggcg caacttaaag
     5761 cggaactgaa aaacgtacaa aatatctttt ctgtcgaacg gctggattat tccaaaggtt
     5821 tgccagagcg ttttctcgcc tatgaagcgt tgctggaaaa atatccgcag catcatggta
     5881 aaattcgtta tacccagatt gcaccaacgt cgcgtggtga tgtgcaagcc tatcaggata
     5941 ttcgtcatca gctcgaaaat gaagctggac gaattaatgg taaatacggg caattaggct
     6001 ggacgccgct ttattatttg aatcagcatt ttgaccgtaa attactgatg aaaatattcc
     6061 gctactctga cgtgggctta gtgacgccac tgcgtgacgg gatgaacctg gtagcaaaag
     6121 agtatgttgc tgctcaggac ccagccaacc cgggcgttct tgttctttcg caatttgcgg
     6181 gagcggcaaa cgagttaacg tcggcgttaa ttgttaaccc ctacgatcgt gacgaagttg
     6241 cagctgcgct ggatcgtgca ttgactatgt cgctggcgga acgtatttcc cgtcatgcag
     6301 aaatgctgga cgttatcgtg aaaaacgata ttaaccactg gcaggagtgc ttcattagcg
     6361 acctaaagca gatagttccg cgaagcgcgg aaagccagca gcgcgataaa gttgctacct
     6421 ttccaaagct tgcgtaggag cggttaatca cccgtaagtg gaactaacag cacatcgacc
     6481 tcacttgagg caatcactct tttcgccgag caggatgctc gcgaaaagaa actgtgattg
     6541 tgattaccgc aaatcaccaa atcgaaatga tgtttgtgac atacttccag aatatgttcg
     6601 cttaactcac cgtaggcaat aaacgtcttg tcaacgggat accccgcatc ctgaattaac
     6661 ttatcaagaa agctttgcgt ttcttcttgc atcacgctgc gtaaatcttc aagcatcggc
     6721 gcggctaatt gattgtacat ttccgggtcg gaagcgagag taattaaact gatgtgtccc
     6781 tttactggcc tggcgataga taccgctttt gccagcagtt gctgactttc cggtgtaacc
     6841 gcaacagcga caagaatatt gctatagctc ataacctgtt ccttattctg tgaacttcag
     6901 gtgacattaa agctttactc ctaatggaga aacgacgcaa tcccaactcg gtcaaacagg
     6961 taaatattag tctgattatt agtaaaga
//
LOCUS       DAPGWB010000205         6919 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.207, whole genome shotgun sequence.
ACCESSION   DAPGWB010000205 DAPGWB010000000
VERSION     DAPGWB010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6919
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.207"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(101..1498)
                     /gene="ccp"
                     /locus_tag="RHX79_004221"
     CDS             complement(101..1498)
                     /gene="ccp"
                     /locus_tag="RHX79_004221"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HDV2199325.1"
                     /translation="MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAV
                     SENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAAL
                     LADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYA
                     SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGV
                     DGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSW
                     DEIIAKLEKDPQLKAQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENA
                     LTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKE
                     ERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFL
                     HSLNGVYTPYMQDKQ"
     gene            1903..3552
                     /locus_tag="RHX79_004222"
     CDS             1903..3552
                     /locus_tag="RHX79_004222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase"
                     /protein_id="HDV2199326.1"
                     /translation="MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMI
                     EGLPASDALTPADRYLELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRD
                     FDLRKFVENHFWLPEVYSSEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQ
                     SYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYY
                     LSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMP
                     DGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRD
                     TGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRDAVNRY
                     LWDDENGIYRDYDWRREQLALFSAAAIVPLYVGMANHEQADRLANAVRSRLLTPGGIL
                     ASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYLEQHKMI
                     EKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP"
     gene            complement(3603..4205)
                     /locus_tag="RHX79_004223"
     CDS             complement(3603..4205)
                     /locus_tag="RHX79_004223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV2199327.1"
                     /translation="MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES
                     YPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVP
                     RDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNK
                     EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS"
     gene            4725..5624
                     /locus_tag="RHX79_004224"
     CDS             4725..5624
                     /locus_tag="RHX79_004224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417978.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2199328.1"
                     /translation="MDKIHAMQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQL
                     GTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLSELDGLFQQDATSISGKLRIDIPPGI
                     AKSLLLPRLSEFLYLHPGIELELSSHDRPVDILHDGFDCVIRTGALPEDGVIARPLGK
                     LTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGG
                     MLTVNSSENYLAAGLAGLGIIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQR
                     RELSRRVNLFMQWLAGVMKEHLD"
     gene            5673..6686
                     /gene="yhjD"
                     /locus_tag="RHX79_004225"
     CDS             5673..6686
                     /gene="yhjD"
                     /locus_tag="RHX79_004225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YhjD"
                     /protein_id="HDV2199329.1"
                     /translation="MTQENEIKRPTQDLEHEPIKQLDNSEKGGKVSQALETVTTTAEK
                     VQRQPVIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPML
                     LQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAI
                     RAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH
                     LNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVI
                     KIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGK
                     TQP"
BASE COUNT         1752 a         1789 c         1633 g         1745 t
ORIGIN      
        1 actttttata atataaacat ttaacatgat aatattaaaa acagacttta ttatcgtaat
       61 aaaaatcgcc caaacattcc tgttcgggcg atcaaattaa ttattgttta tcctgcatat
      121 acggcgtgta caccccgttc agactgtgca ggaaagctac gatatcatcc acatcctcct
      181 gcggcagctc tttgcctacc tgatagcgca gcatcagttt caccgccccg tccagcgtcg
      241 gcacgtcacc gcgatggaag tacggtgccg ttaaagcaac gttacgtaaa ccgggtactt
      301 tctgacgcaa tttatcacgc tcttctttag tcacattcat acgaccaata tccgccgccg
      361 taatttcccc aaagttaaag tcttttttca gccccaacgg ttcaaaggaa cgtccgccga
      421 gaataatacc accatgacaa gttgcacatt tattatcttt aaataattga tagccttttt
      481 tctgttgcgc cgtcagcgca ttttcatctc cacgcaacca tttatcaaat ggggaatccg
      541 gcgtaattaa tgttttctca aattcagcaa tggcatcagt aatattttcg ccactgaaac
      601 cttgcggata aacttcgagg aactgcgctt taagctgcgg atctttttcc agcttagcaa
      661 taatttcgtc ccaggatttc gacgccattt caatcgggtt caacggcggt ccacctgcct
      721 gatcctgcaa tgttgccgca cgaccatccc agaactgctc aacgttaaat actgagttaa
      781 ataccgtcgg cgcgttaatc ggcccaactg cgccaccaac accaatcgat gtttttctgc
      841 catcgacgcc ccccgcattc aacgcatggc aatgagcgca tgaaatggtg ctatcagccg
      901 ataaacgggg atcgtgatac agcgcaaagc ccaacgccac tttttgcgca tcggtaggca
      961 gtttttgcgg gatgggctgc accggttcat tgcgatgctc cggagcagta tcattgctgg
     1021 cgtaatattc cgcgcgctgt tttgcaatcc aggccagtat ttccgcccgc tcttcatcac
     1081 tcaccttacc cgcccagtgt agcgcggtat aacgcgttgg tggcatagtt tcatactgca
     1141 tcacccattc aatcttattc agatcgcttt gcgaaacggg tttatcagcc agcagtgccg
     1201 cacgcacggc ctcgaggtta aaagatttat atccaagctt aatgtcgtaa tccatcaact
     1261 gtttcgcgcc aggaatataa taataggcgg gtaattctgc cgaaggtgtg tggcaatagt
     1321 cgcatccttt ttcgcggaga aagcctaaaa ccttattatt ttcactgaca gcagatgcct
     1381 gaacatcggc ctgtttactg cgtttattat cgtggtacca cacataacca gataacccta
     1441 aatagcaaat cgcgacgcca gccaggccga tcgcggtaat acgtgagacc attttcatta
     1501 ttcttccctc acggtggtga gttattgtga cccagaaaat tttccagaat gctgcaaacg
     1561 tctctgcgag acaaagccat cataaaaaac agggagatac gctttttgat aggaatcaat
     1621 caattacatg aatataaact atcaataaga tagcctgtgc ctattaccca gatcaggaat
     1681 ggcatatcat gattgcggcg agagcaggat tgaatgttct gaaaatgaaa aacaacacga
     1741 aatccgtatt tttataaatt ccatggatat tagtgcgtta tattttttga caggttaata
     1801 aacgtgatcc accgcacgct ttgtcgccca ccaggcggag cgaatgacta cccttaaaga
     1861 aaagcccgat aattagcgac gaatttcgga ggttggatcc ttatgctcaa tcagaaaatt
     1921 caaaacccta atccagacga actgatgatc gaagtcgatc tctgctatga gctggacccg
     1981 tatgaattaa aactggatga gatgatcgag gcagaaccgg aacccgagat gattgaaggg
     2041 ctgcccgcct ctgatgcgct gacgcctgcc gatcgctatc tcgaactgtt cgagcatgtt
     2101 cagtcggcga aaattttccc cgacagtaaa acctttcccg actgcgcacc caaaatggac
     2161 ccgctggata ttttaatccg ctaccgtaaa gtgcgccgtc atcgtgattt tgacttgcgc
     2221 aagtttgttg aaaatcactt ctggctgccg gaggtctact ccagcgagta tgtatcggac
     2281 ccgcaaaatt ccctgaaaga gcatatcgac cagctgtggc cggtgctaac ccgcgaacca
     2341 caggatcaca ttccgtggtc ttctctgctg gcgctaccgc agtcatatat tgtcccgggc
     2401 ggccgtttta gcgaaaccta ctattgggat tcctatttca ccatgctggg gctggcggaa
     2461 agtggtcggg aagatttgct gaaatgcatg gccgataact tcgcctggat gatcgaaaac
     2521 tatggtcaca tccccaacgg caaccgcacc tattatttga gccgatcgca accaccggtt
     2581 tttgcgctga tggtggagtt gtttgaagaa gatggtgtac gcggtgcgcg ccgctatctc
     2641 gaccacctta aaatggaata tgccttctgg atggacggtg cagaatcgtt gatccctaat
     2701 caggcctatc gccatgttgt gcggatgccg gacggatcgc tgctcaaccg ttattgggac
     2761 gatcgcgaca cgccgcgtga cgaatcctgg cttgaggacg ttgaaaccgc gaaacattct
     2821 ggtcgcccgc ccaacgaggt gtaccgcgat ttacgcgcgg gagcggcctc aggttgggat
     2881 tactcttccc gttggctgcg tgatactggt cgtctggcga gcattcgtac cacccagttc
     2941 atccccatcg atctgaatgc cttcctgttt aaactggaga gcgccatcgc caacatctcg
     3001 gcgctgaaag gcgagaaaga gacagaagcg ctgttccgcc agaaggccag tgcccgtcgc
     3061 gatgcggtaa accgttacct ctgggatgat gaaaacggca tctaccgcga ttacgactgg
     3121 cgacgcgaac aactggcgct gttttccgct gccgccattg tgccgctcta tgtcggcatg
     3181 gcgaaccatg aacaggccga tcgtctggca aacgccgtac gcagccggtt actgacacct
     3241 ggcgggattc tggcaagcga gtacgaaacc ggtgaacagt gggataaacc caatggctgg
     3301 gcaccgttac aatggatggc aattcaggga tttaaaatgt atggcgatga ccttctgggt
     3361 gatgaaatcg cgcgcagctg gctgaaaacg gtgaatcagt tctatctgga acagcacaaa
     3421 atgatcgaga aataccatat tgccgatggt gttccccgcg aaggcggcgg tggcgagtat
     3481 ccgttgcagg atgggtttgg ctggactaac ggtgtggtac gccgtttaat tggtttgtac
     3541 ggcgaaccat aatattttta cagccagccg ctaacttcct gctggctgta aaattatcct
     3601 cttcaggagg agatatttaa catcattgcc gcctgggtgc gatttttcac ttccagacgg
     3661 cgatacaggg attccagatg cgcttttacc gttccggtac tgatattcag cgctctgccg
     3721 atctccttat ttgattcgcc cgccgctaac atggttaaaa tctcccgctg gcgggcgctt
     3781 aacgatttga gatctttaat gtccttttcc ggcgtcgtcc gccagtctcc aggcagaaac
     3841 atcatcccca tcgccgcact atttaccgcc aacgcaaatg tctcgacggt tgaatcacga
     3901 ggcacaatgg ccagcacatt aaaatgaata acttcctgta accaccgttt attgcaatcc
     3961 gtcgccgtga ttaacacctt aacctcagga aactgcacca cggttttttg cagcaaccag
     4021 tagcaaaact caccatcctg atcgccatcg agcataacta aggcttcagg gtaactttcc
     4081 agcttttgcc ataactcgtc tgcctgactg gccccctgaa tactcactcc tggaatacgc
     4141 tgctgtaaac tgattttcat tccatgaata aatattgact gcctgtcaaa catgactatt
     4201 tgcataactg aatctccacc tgaatacgtt aaaaagactt aagtagtgga agggtattac
     4261 ccgcgagaaa aaataagaat tcgccatttg gcggtggcca ttctacagag atgacgcgta
     4321 gaaaatagtt accgatataa atagttacag ctaaacgcct gaaattacat gtcgagggca
     4381 ctatttaaaa caattttgag gatttcctta tattggtggt tagtacgcat gcaattaaaa
     4441 atgaaactcc gcgaccacaa gcaaaaataa caaacggcaa tgagacaaaa ataagcacaa
     4501 atagccaaca cgtcctctat tcactttaaa gggaatcgct gaaaaatacg ctctgtttag
     4561 ggggattcac ctttctcaga aagctattcc gcccttttcc tgctgagaaa tcgccacatt
     4621 cgtcatgaca acattgtgaa acccggcatt agatgttaga aaaaacaata aacaatgcga
     4681 tatgcgcgtt actgtttcgc tgtgaacaac aatcggtcaa agaaatggat aaaattcacg
     4741 caatgcagtt gttcatcaaa gtcgcggagc tggaaagttt ttcccgcgcg gcggatttct
     4801 ttgctttgcc aaaaggaagt gtttcgcgcc agatacaggc actggaacat caacttggca
     4861 cccagcttct ccagcgcacc acgcgacggg tcaaactcac gccagaaggc atgacctatt
     4921 atcaacgagc aaaagatgtg ttgagtaatc tcagcgaact ggacggtctg tttcaacagg
     4981 atgccaccag tatcagcggt aaattacgca tcgacatccc gccaggaatc gcgaaaagcc
     5041 tgttactgcc gcgcctgtcg gaatttctct atctgcatcc gggaattgag ctggaactga
     5101 gtagccatga ccgtccggta gatattcttc atgatggttt tgattgcgtg atacgcactg
     5161 gcgcgttacc ggaagatggc gttatcgccc gtcccctcgg caaactgacc atggtcaact
     5221 gtgccagtcc gcactatctg acgcgctttg gttatccgca aagccccgat gatctgactt
     5281 cacacgcaat agtgcgttat acaccgcacc tgggtgtaca tccgttaggt tttgaggttg
     5341 ccagcgttaa tggcgtccag tggtttaagt ctggcggcat gttgacggta aacagtagcg
     5401 aaaactatct cgccgccggt cttgccggtc tggggattat tcagatcccg cgcattgccg
     5461 tgcgcgaagc cctgcgtgcc gggcggctta ttgaagtgtt gccaggctac cgtgccgagc
     5521 cgctctccct ttcgctggtt tacccgcagc gtcgggagct ttcccggcgt gtaaacctgt
     5581 ttatgcagtg gctggctggc gtaatgaaag agcacctgga ctgaccgact atacttttta
     5641 agaatgacca cgacagaagg acaaaagagc ggatgacgca ggaaaacgag atcaaacgtc
     5701 ccacccagga tctggagcac gagccgatta agcagttgga taatagcgag aaaggcggca
     5761 aagttagcca ggcgctggaa accgtcacca ccactgccga aaaagtccaa cgccaaccgg
     5821 ttattgcgca cctgattcgc gcgacagaac gctttaacga tcggctgggt aaccagtttg
     5881 gtgcggctat cacctatttc tcatttttat cgatgatccc gattttgatg gtgtcgtttg
     5941 ccgcaggggg ctttgtgctg gcctcccatc cgatgttgct acaggatatc ttcgacaaaa
     6001 ttctgcaaaa catcagcgat ccgacgctag ccgccacgtt gaaaaacacc atcaacaccg
     6061 ccgttcagca gcgtacgact gtagggcttg tcggcctggc ggtggcgctt tattccggca
     6121 tcaactggat gggtaacctg cgtgaagcga ttcgtgccca gtcgcgcgat gtctgggaac
     6181 gctcgccgca agatcaggag aagttctggg taaaatatct gcgtgatttt atttcgctga
     6241 ttggtttgtt gattgcgctg attgtgacgc tttcgatcac ctcggttgcc ggttcggcgc
     6301 agcaaatgat tattagcgcc ctgcacctga acagcattga gtggctgaaa ccgacgtggc
     6361 ggttgattgg cctggcgatt tccatcttcg ccaactatct gcttttcttc tggatcttct
     6421 ggcggttgcc gcgccaccgt ccgcgcaaaa aagccctgat tcgcggaaca tttctggctg
     6481 ctattggttt tgaagtgatt aaaatcgtga tgacctacac cttgccatcg ctgatgaaat
     6541 ccccctctgg cgcagcattt ggttccgtgc tggggctgat ggcatttttc tacttcttcg
     6601 cccgtttgac gctgttttgc gcggcgtgga ttgccaccgc cgaatataaa gacgacccgc
     6661 gaatgccagg gaaaacgcag ccttaaaata ggccggatgc ggcgtaaacg ccttatccgg
     6721 catacgattt tattcggcct ggctccccgt aggccggata agatgcgcca gcatcgcatc
     6781 cggctataat gcgcacataa cctcttgaaa ctcttcccca gagcctcttc agccatctat
     6841 ttgggagcaa acaatttcat tccaactcat aaccccagca tataaatcca gttggtaact
     6901 tttatttaac ctgaaacca
//
LOCUS       DAPGWB010000206         6884 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.208, whole genome shotgun sequence.
ACCESSION   DAPGWB010000206 DAPGWB010000000
VERSION     DAPGWB010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6884)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6884)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6884
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.208"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            213..1745
                     /locus_tag="RHX79_004226"
     CDS             213..1745
                     /locus_tag="RHX79_004226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVR family protein"
                     /protein_id="HDV2199330.1"
                     /translation="MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTY
                     PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP
                     CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC
                     EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR
                     TLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQK
                     QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP
                     YALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK
                     VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLR
                     GDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSIELLERCPPRMG
                     NL"
     gene            complement(1797..2516)
                     /gene="fadR"
                     /locus_tag="RHX79_004227"
     CDS             complement(1797..2516)
                     /gene="fadR"
                     /locus_tag="RHX79_004227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HDV2199331.1"
                     /translation="MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT
                     RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL
                     SVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPI
                     YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHE
                     SGEIWHRMQKNLPGDLAIQGR"
     gene            2738..4279
                     /gene="nhaB"
                     /locus_tag="RHX79_004228"
     CDS             2738..4279
                     /gene="nhaB"
                     /locus_tag="RHX79_004228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter NhaB"
                     /protein_id="HDV2199332.1"
                     /translation="MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAG
                     WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFM
                     VAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVG
                     FYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTM
                     VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKV
                     REVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSL
                     TGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLF
                     YIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPN
                     GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMG
                     WIATL"
     gene            4425..4955
                     /gene="dsbB"
                     /locus_tag="RHX79_004229"
     CDS             4425..4955
                     /gene="dsbB"
                     /locus_tag="RHX79_004229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HDV2199333.1"
                     /translation="MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLC
                     IYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFA
                     TCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLV
                     VISQPFKAKKRDLFGR"
     gene            complement(5001..6269)
                     /gene="umuC"
                     /locus_tag="RHX79_004230"
     CDS             complement(5001..6269)
                     /gene="umuC"
                     /locus_tag="RHX79_004230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase V catalytic protein"
                     /protein_id="HDV2199334.1"
                     /translation="MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEA
                     KALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE
                     AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT
                     GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF
                     NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE
                     KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW
                     QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA
                     GQGIQQQWQMKRAMLSPRYTTRSSDLLRVK"
     gene            complement(6269..6688)
                     /locus_tag="RHX79_004231"
     CDS             complement(6269..6688)
                     /locus_tag="RHX79_004231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HDV2199335.1"
                     /translation="MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL
                     IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR
                     PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR"
BASE COUNT         1642 a         1752 c         1697 g         1793 t
ORIGIN      
        1 cctgactctg cggcaatatg gcgtctttag tatctcctgc tgaacgccct ttttatccag
       61 cataaaattc cgttcagaag cggattagtg gcactctgat aataagaaat cgcaaagaaa
      121 aaaattctcc ggcgacgcgg tttttaacag gtgttctatg cttgaaatga ggtgctccac
      181 acagagagcg ccgacaacaa tgaggtgcgc gtatggcgac gatcgattct atgaataagg
      241 acaccacacg tttgagcgat ggacccgact ggacgttcga cctgctggat gtttatctgg
      301 cagagataga ccgggtggcg aaactctacc ggctggatac ctacccgcac cagattgaag
      361 tgataacctc agaacagatg atggatgcct actccagcgt cggcatgcca attaactatc
      421 cgcactggtc attcggtaaa aagtttatcg agactgaacg gctgtataag cacggtcagc
      481 aaggactggc ctatgaaatc gtcattaact ctaacccgtg tatcgcttac ctgatggaag
      541 agaacaccat taccatgcag gcgctggtga tggcacacgc ctgctatggg cataactctt
      601 tctttaaaaa caattactta ttccgcagtt ggaccgacgc cagttcgatt gtcgattatc
      661 tgatttttgc ccgtaaatat attaccgagt gcgaagaacg ttatggcgtt gatgaagtag
      721 aacggcttct ggactcgtgc cacgcgctga tgaactacgg cgtggaccgg tacaaacgcc
      781 cgcaaaaaat ctcgctgcaa gaagagaaag cccggcagaa aagtcgcgaa gagtatctac
      841 aaagtcaggt caatatgctc tggcgtaccc tgccgaagcg cgaggaagag aaaacggttg
      901 ctgaagcgcg ccgctatccg tccgaaccac aagaaaacct gctctatttt atggagaaaa
      961 atgcgccact gctggaatca tggcagcgtg aaatcctgcg tattgtgcgt aaggtgagcc
     1021 agtattttta tccgcaaaaa cagactcagg tgatgaacga aggctgggcg accttctggc
     1081 actataccat ccttaaccat ctgtatgatg aagggaaagt aacggaacgt tttatgctgg
     1141 agtttttgca cagccacacc aatgtggtct tccagccccc ctataacagc ccgtggtaca
     1201 gcggcatcaa cccgtatgcc ctcgggttcg ccatgttcca ggatattaaa cggatttgtc
     1261 agtcgccaac ggaagaagac aaatactggt tcccggatat cgccggttcc gactggctgg
     1321 aaacgctgca tttcgcgatg cgtgatttca aagatgagag ttttatcagc cagtttctgt
     1381 caccgaaagt gatgcgtgat ttccgcttct tcaccgtgct ggatgatgat cggcataatt
     1441 atctggagat ttccgctatt cataatgaag aaggttatcg ggagatccgt aaccggttat
     1501 cgtcgcaata taacttaagt aatctggagc cgaatattca gatctggaac gtggatttgc
     1561 gcggcgaccg ttcgctgacg ctgcgttaca ttccacataa tcgcgcaccg ctggatcggg
     1621 ggcgcaaaga agtgctgaag catgtgcatc gcctgtgggg atttgatgtg atgctcgaac
     1681 agcaaaacga agacggcagc atcgagttgc tggaacgttg cccgccaaga atgggaaatc
     1741 tgtaaaaaca acaaaaaacc cctcgtttga ggggtttgct ctttaaacgg aagggattat
     1801 cgcccctgaa tggctaaatc acccggcaga tttttctgca tccggtgcca aatctcgcca
     1861 ctctcatgcc catagcgacg cactgtttcg tacacctgat cgtgcgcgcc ttcactgcac
     1921 aacgccgaca gtttgtggta gaagcccagc gccagactgc gcgcttccgg attggcgaaa
     1981 tagtgacgac caatgcgcgt atacagccct ttcatcccgt taaggatcag accgtaaatc
     2041 gggttgccgg aagcaaacgc caggccgcgg aatatgttgt aatccagctc ggcaaaggca
     2101 tcggcgtgat cggccacttc attagcggta gccagcactt cctgcgcttt atcgggatgc
     2161 tgacgaaacg cggtgcgaat aaaaatagtg gaaatattgg tacgcaccga cagcaaatta
     2221 tcaataagct gcggcacact ttcgtgatcc agtcgcgcca gtgtttcaag gatatttaaa
     2281 ccggaagttt cccagaaatt attcaccttc gtcggcttgc catgttgaat ggtcaaccag
     2341 ccatctcgtg ccagacgctg taacacttca cgtaacgtag tacgcgttac gccaattaat
     2401 tctgaaagtt cacgttctgc gggcaaaata gtcccgggag ggaagcggtt attccagata
     2461 ctttcaataa tgtactcttc cgcgaaaccc gccgggcttt gcgccttaat gaccatagtg
     2521 agatttccat aacacagcaa aacaaagttg gactcatcat accagagggc taactacgct
     2581 gatagcagac aaaaagaaga aaaaagggat caaggcttca ttttccgcat ctctttcccc
     2641 ttgaccatca agacttgcct cactcctgcc tgaccgttaa gctttgcgtt taaacataaa
     2701 aacatcattg attatttgta aggtaaggga aaccatcatg gagatctcct ggggccgcgc
     2761 gctatggcgc aattttttgg gccagtcccc cgactggtac aaactcgccc tcatcatttt
     2821 cttaatcgta aatccgttaa ttttcctcat cagccctttc gtcgcgggct ggttgctggt
     2881 agcggaattt attttcactc tggcgatggc cctgaaatgc tacccgctgc tccccggtgg
     2941 tctgttggct atcgaagcgg tattcatcgg catgaccagc gcggaacacg tccgtgaaga
     3001 ggtggcggca aatcttgaag tcttgctgtt actgatgttt atggtggcgg gtatctattt
     3061 tatgaaacag ctgttgctgt tcatatttac ccgtttgctg ttaagcattc gctccaaaat
     3121 gctgctgtcg ctctcttttt gcgtggcggc tgcgttcctc tccgcgttcc tcgatgcctt
     3181 aaccgtcgtg gcggtggtga tcagcgttgc agtcggtttt tatggtattt atcatcgcgt
     3241 agcctcttcc cgtaccgaag acaccgacct gcaagacgat agtcatatcg acaagcatta
     3301 caaagtggtt ctggaacagt tccgtggctt tctgcgtagc ctgatgatgc atgccggtgt
     3361 cggcaccgca ttaggcggcg taatgaccat ggtgggcgaa ccacagaacc tgatcatcgc
     3421 taaagcggct ggctggcatt ttggcgattt cttcctgcgc atgtcgccgg tgaccgttcc
     3481 ggttctgatt tgtggcctgt taacctgcct gctggtagag aagctgcgtt ggtttggcta
     3541 cggtgaaacg ctgccggaga aagtccgcga agtgttgcaa cagtttgacg atcaaagccg
     3601 ccaccagcgt acccgtcagg ataaaatccg tctgattgtc caggcgatta ttggcgtctg
     3661 gctggtgact gcgctggcgt tgcatctggc ggaagttggc ttgattggtt tgtcagtcat
     3721 tattctggca acatcattga ccggtgtcac cgatgagcat gctatcggta aagccttcac
     3781 cgaatctctg ccattcaccg cactgttgac ggtgtttttc tcggtagtcg cggtgattat
     3841 cgaccaacaa ctgttttcgc caattattca gtttgtgttg caggcatcgg aacatgctca
     3901 gctgtcgctg ttctatattt tcaacggtct gctgtcatcc atttcggata acgtcttcgt
     3961 ggggacgatt tatatcaacg aagcgaaagc ggcaatggaa agtggcgcta tcacgttgaa
     4021 gcaatacgag ctgctggcgg tcgccattaa taccggtacc aatctgccct ctgtcgctac
     4081 gccgaacggt caggctgcgt tcctgttcct gctgacctct gcactcgcgc cattgattcg
     4141 cctctcttat ggccgcatgg tgtggatggc cctgccttac accctcgtac tgacactcgt
     4201 cggcttgctc tgcgtcgagt ttacgcttgc ccctgtaacc gaatggttta tgcaaatggg
     4261 ctggatagca acgctttgat aacaacttac cgggcatata aatgcccggt ttgccttttc
     4321 gcccgataat tgtccaattg cgtcctattt ttgctgcctc ctggtggcgc agcgaatgaa
     4381 ttggtttaaa ctgcgcactc tatgcatatt gcagggaaat gattatgttg cgatttttga
     4441 accaatgttc acaaggccgg ggcgcgtggt tgttgatggc gtttactgct ctggcactgg
     4501 aactgacggc gctgtggttc cagcatgtga tgttactgaa accttgcgtg ctctgtattt
     4561 atgaacgttg tgcgttattc ggcgttctgg gtgctgcgct gattggcgcg atcgccccga
     4621 aaactccgct gcgttatgta gcgatggtta tctggttgta tagtgcgttc cgcggtgtgc
     4681 agttaactta cgagcacacc atgcttcagc tctatccttc gccgtttgcc acctgtgatt
     4741 ttatggttcg tttcccggaa tggctgccgc tggataaatg ggtgccgcaa gtgtttgtcg
     4801 cctctggcga ttgtgccgag cgtcagtggg attttttagg tctggaaatg ccgcagtggc
     4861 tgctcggtat ttttatcgct tacctgattg tcgcggtgct ggtggtgatt tcccagccgt
     4921 ttaaagcgaa aaaacgtgac ctgttcggtc gctaatccct tcagcgctcc tgcgggagcg
     4981 cttttttcct gccgctatat ttatttgacc cgcagtaaat cagaacttcg cgttgtataa
     5041 cgtggtgaaa gcatggcacg cttcatctgc cattgttgct ggatcccctg cccggcaaaa
     5101 tagagtgttc ctctgccctc tttagcattc agtgtatcca ttaccgtcat caattgctca
     5161 ctcccggggc gcggtgcgtt gtcatcgaat aaattgagct gcgcgactcc ctgactgaag
     5221 aaatccccca gcatcacgcc cgctttttgg tagcgatggc ccgcttgcca gatggcatcc
     5281 agagatcgcg tagcagcgtt aatgatatcc ctgctgtcct gagtgggcgt cagcagtttt
     5341 accgacgcgc tattgccgta ataaggttca ttgagcgcaa atggtgacgt cttaataaat
     5401 gtggagataa accgacaata ttgatgctcg ctgcgaagtt tttccgccgc ccgggcagcg
     5461 taactacaaa tggcctgccg catcgatgga taatccgtga tgcgttcacc aaacgagcgg
     5521 gaacagataa tttcctgctt cgtcggtgca aactcttcca gttgcaaaca gggttcgccg
     5581 cgcagttcac gcaccgttct ttcgagcacg acattaaaat gtttacggat aaaccggata
     5641 tctgtatccg ccaaatcgag aacggttttg atccccatcg cgtccagttt tttgctgatc
     5701 cgccgtccaa tcccccagac gtcatccacg gggagagcag acattaattt acgctggcgt
     5761 tccagatttg ataaatccac caccccaccc gtctgccgct gccatttttt tgccgcatga
     5821 ttggcaagct tagccaacgt tttggtctgg gcgatcccca caccaacagt aagatgggta
     5881 cgttgtagca ccgttgcgcg aatttctctg ccaaaatcag tcagatcgcg acaattacgc
     5941 acacctgtca gatcgcagaa tgcctcatca atactgtaaa tctcgacgcg gggcgatagt
     6001 tcttccagcg tcgacatcac ccgattgctc atgtctgcgt aaagctcata attgctgcta
     6061 aagcaaacca cgccacagcg acgaaacaga tctttttgtt tgaaccaggg atcgcccatt
     6121 ttaacaccca gcgcctttgc ctcagcgttt cgggcgataa cgcaaccgtc attattcgat
     6181 agcacaacca ccggtttacc ccataaatca gggcgaaaca ccgtctcaca gctggcataa
     6241 aacgcgttta catcacagag agcaaacatc agcgcatcgc cttaacgacg tggatcacca
     6301 caccaaagac atccagcgta tcttcgctac tgatggtaat gggcgagtac gcactgttca
     6361 tgggaataag ctgtaccgtc gggcgtagtt gcaatttttt caccgtaaac tcgccgtcaa
     6421 cagcagcgat gacaatatca ccatggctgg cggtaatagc gctatcgaca atcagtaaat
     6481 caccgtcact aattccacca tcaatcatag aatcaccact tgctttgacg aagtaagtcg
     6541 cgctgggatg ctggatcaac agttgattca gatcgatgcg ctgttcaacg taatctgctg
     6601 ccggtgaagg aaagccacac tgaacaagat cgctaaatag cggaaaagtc acaatttcgc
     6661 ggagatccgc aggcttgata aacaacataa taatctgcct gaagttatac tgtttttata
     6721 tacagtagtc tgttcttgcc agcagatcaa tactgattca ggctatcaat atttgtcgct
     6781 gcatagactg ctgatttttc gttctcttat cctgtgctca cgtggccttc tggcgacgac
     6841 gctcatccag cagaaatgaa aaatatcacc cggcaaaaaa atag
//
LOCUS       DAPGWB010000207         6832 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.209, whole genome shotgun sequence.
ACCESSION   DAPGWB010000207 DAPGWB010000000
VERSION     DAPGWB010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6832)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6832)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6832
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.209"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            107..793
                     /locus_tag="RHX79_004232"
     CDS             107..793
                     /locus_tag="RHX79_004232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016232851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HDV2199336.1"
                     /translation="MSFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSS
                     ATSPAAKASTRSYIPQKTYRDSRWQERDELFQGMVAEGILLERKEWLITRCEKMYFDN
                     LEKWFGHYCHIHCQVSLGRLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKI
                     VCVIELDDPSHERADRIIRDRWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPL
                     VAATKSEPVH"
     gene            complement(884..1020)
                     /locus_tag="RHX79_004233"
     ncRNA           complement(884..1020)
                     /ncRNA_class="other"
                     /locus_tag="RHX79_004233"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(1065..1152)
                     /locus_tag="RHX79_004234"
     tRNA            complement(1065..1152)
                     /locus_tag="RHX79_004234"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1116..1118),aa:Ser,seq:gga)
     gene            1386..2324
                     /gene="ghrA"
                     /locus_tag="RHX79_004235"
     CDS             1386..2324
                     /gene="ghrA"
                     /locus_tag="RHX79_004235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415551.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrA"
                     /protein_id="HDV2199337.1"
                     /translation="MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALV
                     WHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEY
                     AVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRF
                     PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPD
                     GAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHV
                     AAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY"
     gene            2379..3116
                     /gene="ycdX"
                     /locus_tag="RHX79_004236"
     CDS             2379..3116
                     /gene="ycdX"
                     /locus_tag="RHX79_004236"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding phosphatase"
                     /protein_id="HDV2199338.1"
                     /translation="MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDM
                     EDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHE
                     PVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNS
                     SFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPER
                     ILNVSPRRLLNFLESRGMAPIAEFADL"
     gene            3140..3694
                     /gene="ycdY"
                     /locus_tag="RHX79_004237"
     CDS             3140..3694
                     /gene="ycdY"
                     /locus_tag="RHX79_004237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone YcdY"
                     /protein_id="HDV2199339.1"
                     /translation="MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQ
                     DELLTRLQKSCDMAQVSADYNALFIGDECAVPPYRSAWVEDATEAEVRAFLSKRGMPL
                     ADTPADHIGTLLLAASWLEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFW
                     RTMAPLTRDAISAMWDELEEDSEE"
     gene            3796..4287
                     /locus_tag="RHX79_004238"
     CDS             3796..4287
                     /locus_tag="RHX79_004238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HDV2199340.1"
                     /translation="MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQ
                     GGLKGLAISAATLISGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLS
                     FVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAKTAHREQEIK
                     NKA"
     gene            complement(4351..5184)
                     /gene="csgG"
                     /locus_tag="RHX79_004239"
     CDS             complement(4351..5184)
                     /gene="csgG"
                     /locus_tag="RHX79_004239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgG"
                     /protein_id="HDV2199341.1"
                     /translation="MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPA
                     PTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQ
                     NLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG
                     IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGE
                     VGYTSNEPVMLCLMSAIETGVIFLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPE
                     S"
     gene            complement(5211..5627)
                     /gene="csgF"
                     /locus_tag="RHX79_004240"
     CDS             complement(5211..5627)
                     /gene="csgF"
                     /locus_tag="RHX79_004240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgF"
                     /protein_id="HDV2199342.1"
                     /translation="MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNS
                     AQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIV
                     DIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF"
     gene            complement(5652..6041)
                     /gene="csgE"
                     /locus_tag="RHX79_004241"
     CDS             complement(5652..6041)
                     /gene="csgE"
                     /locus_tag="RHX79_004241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgE"
                     /protein_id="HDV2199343.1"
                     /translation="MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFY
                     RAFSDKWESDYTGNLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFAL
                     IQTEEALNRRQINQALLSTGDLAHDEF"
     gene            complement(6046..6696)
                     /gene="csgD"
                     /locus_tag="RHX79_004242"
     CDS             complement(6046..6696)
                     /gene="csgD"
                     /locus_tag="RHX79_004242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator CsgD"
                     /protein_id="HDV2199344.1"
                     /translation="MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQ
                     RSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWP
                     HINGVFYAMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHRE
                     KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR"
BASE COUNT         1728 a         1560 c         1684 g         1860 t
ORIGIN      
        1 catgatacta actatatatt gatcgttgca ttgttggcat gtaacacgct gcagcgagta
       61 acattggtaa tgaaatataa tcaacatgga taggtgaaaa ttaattatga gctttatggc
      121 ttttgtaact tgtttgacaa ttgcatttat cgccggtttt gctgttgcca gaaaattgac
      181 actccgaaaa gttgcctcat cggtaatcat cgctaaatcg caacccgtcc cttcatctgc
      241 aacttcccct gccgctaagg cgtcgacaag gagctatata ccgcagaaaa cctatcgtga
      301 ctctcgttgg caagagcgag atgagttatt tcagggaatg gttgccgaag gtattttatt
      361 ggaaagaaaa gagtggttaa tcacgcgttg tgaaaaaatg tatttcgata atctggaaaa
      421 atggtttgga cattattgtc atatccattg ccaggtctct ctggggcgct tgatcaactt
      481 tccagaacaa cctgagttta gcgaagaaga aagaaagcgt ttctttgcaa tttataatgg
      541 catggcaatg gattatgttc tggtttcaaa gaagaacaat aaaatagtct gtgttattga
      601 gctggatgac ccgagtcatg aaagggcgga tcgcattatt cgtgaccgtt ggttggatac
      661 aattatgact cttgcacggg tgccttttgt acgagcttct gtcactaaat tggaggaaat
      721 tcctccggtc tgggagactc gtgacaaaat tcgcccatta gtcgcggcga caaagagtga
      781 accggtgcat taactaagca tcccggtcgg ggcttctcat ccccccggtg tgtgcaatat
      841 acgaaaaaaa gcccgtacct tcgtacgagc tcttctttaa agatggcggt gaggggggga
      901 ttgactcgct tcgctcgccc tgcgggcagc ccgctcactg cgttcacggt ctgtccaact
      961 ggctgtcgcc agttgtcgaa ccccggtcgg ggcttctcat ccccccggtg tgtgcaatat
     1021 acgaaaaaaa agcccgtact ttcgtacgag ctcttcttta aatatggcgg tgaggggggg
     1081 attcgaaccc ccgatacgtt gccgtataca cactttccag gcgtgctcct tcagccactc
     1141 ggacacctca ccaaattgtc gttcctgtct tgctggaacg ggcgctaatt tagggaaatc
     1201 atgacctgag gtcaacaaac tttttgaaaa aatcgcgcgt ttattcaaac ttcaatcaat
     1261 gtgtggtttt aataagcgaa atctgctttt tttgccaccg accacggatt tgttatgctg
     1321 gtggcctttg tagatcataa cgataagtgc gaataaattt cgcacaacgc ttttcgggag
     1381 tcagtatgga tatcatcttt tatcacccaa cgttcgatac ccaatggtgg attgaggcac
     1441 tgcgcaaagc tattcctcag gcaagagtca gagcgtggaa aagcggagat aatgactctg
     1501 ctgattatgc tttagtctgg catcctcctg ttgaaatgct ggcagggcgc gatcttaaag
     1561 cggtgttcgc actcggggcc ggtgttgatt ctattttgag caagctacag gcacaccctg
     1621 aaatgctgaa cccttctgtt ccactttttc gcctggaaga taccggtatg ggcgagcaaa
     1681 tgcaggaata tgctgtcagt caggtgctgc attggtttcg acgttttgac gattatcgca
     1741 tccagcaaaa tagttcgcat tggcaaccgc tgccggaata tcatcgggaa gattttacca
     1801 tcggcatttt gggcgcaggc gtactgggca gtaaagttgc tcagagtctg caaacctggc
     1861 gctttccgct gcgttgctgg agtcgaaccc gtaaatcgtg gcctggcgtg caaagctttg
     1921 ccggacggga agaactgtct gcatttctga gccaatgtcg ggtattgatt aatttgttac
     1981 cgaatacccc tgaaaccgtc ggcattatta atcaacaatt actcgaaaaa ttaccggatg
     2041 gcgcgtatct cctcaacctg gcgcgtggtg ttcatgttgt ggaagatgac ctgctcgcgg
     2101 cgctggatag cggcaaagtt aaaggcgcaa tgttggatgt ttttaatcgt gaacccttac
     2161 cgcctgaaag tccgctctgg caacatccac gcgtgacgat aacaccacat gtcgccgcga
     2221 ttacccgtcc cgctgaagct gtggagtaca tttctcgcac cattgcccag ctcgaaaaag
     2281 gggagagggt ctgcgggcaa gtcgaccgcg cacgcggcta ctaataaagc atcaggattc
     2341 ctgctatcct tggcgggaat tgaatacagg agagagttat gtatcccgtc gaccttcata
     2401 tgcataccgt tgccagcaca catgcatata gcacattgag tgattacatt gcccaggcca
     2461 aacaaaaggg cattaaactt tttgcgatca ccgatcatgg cccggatatg gaagatgctc
     2521 cgcatcactg gcacttcatt aacatgcgta tctggccgcg agtggttgat ggggtaggga
     2581 tcctgcgcgg catcgaagct aacattaaaa atgttgatgg tgaaattgat tgcagcggta
     2641 aaatgtttga ctcgctggat ctgattattg ccggttttca tgagccggtt tttgcaccac
     2701 atgacaaagc gaccaataca caagcgatga tcgccactat cgccagcggc aatgtgcata
     2761 taataagcca tcccggaaat cccaaatatg aaatagatgt gaaagccgtt gctgaagcag
     2821 ccgcgaaaca tcaggtggcg ctggaaatca ataattcttc atttttacac tcacgtaagg
     2881 gcagtgaaga caactgtcgt gcggtagccg cagcggtacg tgatgctgga ggttgggtgg
     2941 cattaggctc ggattctcac accgcgttta ccatggggga atttgaagag tgtcttaaaa
     3001 tcctcgacgc ggtagatttt ccgccagagc gcattttgaa tgtttctccg cgccgcttac
     3061 tgaacttcct tgaatctcgc ggtatggcac cgattgcgga atttgcagac ctttaattac
     3121 tagtaatgga aatatattaa tgaacgagtt ttctatcctc tgtcgtgtgc tgggttcgct
     3181 ctattaccgc caaccgcaag atcctttact ggtgccgctg tttaccctga ttcgtgaggg
     3241 gaaactggct gcgaactggc cactggagca ggatgagtta ctgacgcgtt tacagaaaag
     3301 ctgtgatatg gcgcaagtct ctgccgatta caatgcgttg tttatcggcg atgaatgtgc
     3361 cgtgccgcca tatcgtagcg catgggttga ggacgcaacg gaagcggaag tgcgcgcttt
     3421 tctttccaaa cgagggatgc cactggcgga tacgccagcc gatcacatcg gcacattgct
     3481 gcttgcggct tcctggctgg aagatcagtc aacggaagat gagagcgaag cactggaaac
     3541 actgttcagt gagtatctgt taccctggtg tggtgcgttc ctcggcaaag tggaggccca
     3601 tgcaaccacg cctttctggc gcaccatggc accgctaacc cgtgatgcca ttagtgcaat
     3661 gtgggacgag ctggaagaag attctgaaga gtaaatgtga tcatcgtcac tcataactgc
     3721 aacagataat ttgttgttgc ataaaatgtg tgctcgatct cattcatggc cgcgttttct
     3781 gctatcatgc gcggcatgaa catacttctc tctattgcaa tcacaacagg cattctctcc
     3841 ggtatctggg gatgggtggc tgtttccctg ggcttactaa gctgggcggg cttcctgggc
     3901 tgtacggcct actttgcttg cccgcaaggt gggctgaaag ggctggcgat ctccgctgca
     3961 accctgatta gtggcgtggt gtgggcgatg gtcattattt acggtagtgc actggcacca
     4021 catctggaaa ttctcggtta tgtcataacc ggtattgtgg cgtttctgat gtgtattcag
     4081 gccaaacagc tgctgctttc atttgttccg gggacgttta taggcgcatg cgcgacgttt
     4141 gccgggcagg gtgactggaa actggtgtta ccttcgctgg cgcttgggct ggtatttggt
     4201 tacgcaatga aaaacagcgg cctgtggctg gcggcgcgta gtgcaaagac ggctcaccgt
     4261 gagcaggaaa tcaaaaataa agcgtgaggg gcactcacgc tttcgcttaa acagtaaaat
     4321 gccggatgat aattccggct tttttatctg tcaggattcc ggtggaaccg acatatggcg
     4381 gtatttcacc agaatgtcgt tctgccgttc tgctttgttc tgcaaatccc acagaccacg
     4441 gtcgatacca tcattaatca ggaaaatgac ccctgtttcg atagccgaca tcagacacag
     4501 cataacgggt tcgtttgagg tgtaacccac ttccccttcc agcaagcgct ggtagtcaat
     4561 aaagcggaaa accccggcct gaacttcata ggaaagtatc gtcttactgg tgttcaccga
     4621 ggagaggatc tcaccggtac tcacattgac gacgcgcagg ttcacggcaa tctgatcgag
     4681 ctggtattgc gtgtctgcac cgatcccaaa atatcttgcc ccaacaccgc ccgatttaac
     4741 gttgctttca taaccgataa tcgaaccttc aaccataata tttgccgccg ttaaagattg
     4801 cagcgggatt cggttattaa tggcaaccgt gccgttttct tgtgccgcac gaataatctt
     4861 gcgctcgtta agcaggtttt gtaagccctg gcgctccagc ggtataaacc agcgagaatc
     4921 tttcaatgcc gtgaccagca ttgccgtggc gctttgcgga acagcagtgg agaagttact
     4981 tgccgggtag ggtttaaatt gcccggtttc gtcctgaatg ttgtataccg aaacaaagat
     5041 cttacccgtc ggcgctggca gatgggtcaa atctttgtag ctctgagctc gaggcattaa
     5101 tgtcggtctg gcggcttctt taggcggggc ggttaagcat ccgctcagta acatgacggc
     5161 aaccaaaaga aataagcgct gcatgattat tttccttatg aagctggggc ttaaaaatcg
     5221 gttgagttat tttgtaaacc cgaaacctgg atggtcgagg tttgtccggt tttacgatct
     5281 gtcacgttca actgcaattg accatcgcgg ttagcaatat caacaatata atcgttggtc
     5341 accatgcggc ccggtttacc ggtattaata ttcgacagta gcccacctaa aatttgtgac
     5401 tggatggcct gagtaaagtt atctaacgct gagggtgttt caataccaaa gtcatcgtta
     5461 tagctcggat ctttataaga gttttgggcc tgagcgctat ttaataaaaa agcgccatta
     5521 tttgggttac caccaaagtt tggattacgg aactggaaag tcatggttcc agcccaactt
     5581 aatggcgaaa taagcatgag tagaactact gcatgtttga cacgcattgc agcctccgaa
     5641 caatttttta tttagaattc atcatgcgcc aaatcgcccg tacttaataa cgcctgattt
     5701 atctggcgac gatttagtgc ttcttcagtt tgaatcagtg caaagacgac agttttctcg
     5761 aagtctcttt tcaacggaaa taaaaaagtc tggaaaataa cgtcctgatt gaccgttata
     5821 gtgatccagc ttccccatcg tgcactgggc ctttcattaa tcgttaagtt acccgtatag
     5881 tcactttccc atttatcact aaaggctcgg taaaaatcat ggccaataga tgaaacagta
     5941 tggtcagtta acaatcccgg gacttctacc tcaacggcgt gaagattccc tgcggcgaac
     6001 agaaattctg ccgccacaat ccagcgtaaa taacgtttca tggctttatc gcctgaggtt
     6061 atcgtttgcc caggaaaccg cttgtgtccg gttttttacg gctatcttct tgaaaagatt
     6121 ataaagatgc gttttaaccg tattttcgct gatgaacaac gaacgagcga tctcgttatt
     6181 agacgcgccg atacgcagct tattcaggat ctctttttcc cgatgagtaa ggagggctga
     6241 ttccgtgctg ttataacgat agttaccaga atgtgtaatc aggtaactgg caagcttttg
     6301 cgtaaagtag cattcgccgc gcaggacgcc ttgcaaccca ttgacaacac gttcttgatc
     6361 ctccatggca taaaaaacgc cgttgatatg aggccagttt tcaatgtcgc ggtacgggta
     6421 atcttcaggc gtatttagca acaatatttt gatattgttg tttttcctgc tcaaagtatc
     6481 ctgccaataa tggataagct ttttatctgc ttccatcata tccagaagaa taatagagcc
     6541 tgaagatata tcgtccagag aacgttgaat attatgtaat tttcctgtaa ttgccagcga
     6601 ttgtttaagg tgctgcaaga gagctgtcgc ttgcaaagac ggtttagtga tcaacaataa
     6661 tgtatgacca tgaatactat ggacttcatt aaacatgatg aaaccccgct ttttttattg
     6721 atcgcacacc tgacagctgc ctctaaaata gaagcaccag aagtactgac agatgttgca
     6781 ctgctgtgtg tagtaataaa tcagccctaa atgggtaaaa tataaaacta at
//
LOCUS       DAPGWB010000208         6821 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.210, whole genome shotgun sequence.
ACCESSION   DAPGWB010000208 DAPGWB010000000
VERSION     DAPGWB010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6821)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6821)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6821
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.210"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(204..689)
                     /gene="sixA"
                     /locus_tag="RHX79_004243"
     CDS             complement(204..689)
                     /gene="sixA"
                     /locus_tag="RHX79_004243"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HDV2199345.1"
                     /translation="MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVE
                     IERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVAS
                     VLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKA
                     I"
     gene            complement(892..3036)
                     /gene="fadJ"
                     /locus_tag="RHX79_004244"
     CDS             complement(892..3036)
                     /gene="fadJ"
                     /locus_tag="RHX79_004244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadJ"
                     /protein_id="HDV2199346.1"
                     /translation="MEMTSAFTLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIK
                     QLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI
                     PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIG
                     VSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSSRPLPVRERI
                     LAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGEL
                     AMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLP
                     VRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLI
                     IEAVFENLELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP
                     VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIR
                     MLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVV
                     SSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLSAPQVAERCVM
                     LMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLA
                     TQYGSRFTPCERLVEMGARGESFWKTTATDLQ"
     gene            complement(3036..4346)
                     /gene="fadI"
                     /locus_tag="RHX79_004245"
     CDS             complement(3036..4346)
                     /gene="fadI"
                     /locus_tag="RHX79_004245"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadI"
                     /protein_id="HDV2199347.1"
                     /translation="MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMV
                     VGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
                     FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLF
                     SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWS
                     DGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLT
                     DGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTM
                     SDLTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGH
                     PFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE"
     gene            complement(4526..4810)
                     /locus_tag="RHX79_004246"
     CDS             complement(4526..4810)
                     /locus_tag="RHX79_004246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDV2199348.1"
                     /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFASRAEAEQTL
                     AALTEKARSVESEPCKITPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR"
     gene            5182..6522
                     /gene="fadL"
                     /locus_tag="RHX79_004247"
     CDS             5182..6522
                     /gene="fadL"
                     /locus_tag="RHX79_004247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708225.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid transporter FadL"
                     /protein_id="HDV2199349.1"
                     /translation="MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSG
                     EGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTA
                     WVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYR
                     LNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQSPAGQTPQGQALAATANGIDS
                     NTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYG
                     LPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATST
                     SGDTLFQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRF
                     WLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF"
BASE COUNT         1699 a         1835 c         1625 g         1662 t
ORIGIN      
        1 gtcaaacaga cattattcat ttcaacatgt aactttgggc aaaatcaaga tacgcgcaga
       61 agaataattt ccgaatgaat gtagaaagtg ttttatttat agataaggag agtcttcgat
      121 agtagtgagg ttgacagata tccgctgact gatgagcaat tatgcccaat gaatctacct
      181 cattgggcat aatttggaac acatcagata gcttttgcca tcttcagatt acacgggctc
      241 atctgccagt tgaatgtacc gtttccgctt tcatcaagcg ttacgctggc aatggccgag
      301 gtggtaaaca taggcggcgt ttcgcccgga cataactcgg caaccagata cccgactaac
      361 ggtaagtgag agatcaccag taccgaagca acaccttcat tggtcaacgc ctgcaaatag
      421 gcactgacca gaccaacatc gccgcagggc gttaactccg gcagaacttc tgcactggaa
      481 ggcaggttca gacaatcccc tacttcttcc agtgtttgct cggctcgcag gaacgggctc
      541 accagaacgc gttcgatttc cactttttga cctttcagcc agttcgccat caggcgagat
      601 tcgtcacaac cattagtggt cagaggacga acggaatcac tggcggcatc gagggctgcg
      661 tcgccgtgac gcatgataaa aacttgcata ttgcaccgct tttgttaacc agattcgccc
      721 gttttctttc atctgaaacc agagaaagaa aacggtggcc ggcattgtgc cttatccatt
      781 caccgaatga aacgctgttt tttacctcaa tggcgtaagt atagtcaata tgcgtttaca
      841 ttttgaccaa cactccgcca ttcagcgcgg attcatatag ctttgacctt cttattgcag
      901 gtcagttgca gttgttttcc aaaaactttc cccacgcgcg cccatctcga ccaaacgctc
      961 gcaaggggta aaacgggaac catactgcgt ggcaagtcgt tgcattattg caaccacttc
     1021 gcccgcgccg agagaatcga tatagcggaa cggtccaccg agaaatggcg gaaaaccaat
     1081 gccaaatacc gcaccaatat ccccgtcacg cacgctacgg ataacctgct catcaacaca
     1141 acgtactgct tcattcagca tcaacatcac acaccgttca gcaacctgcg gtgcggagag
     1201 tcgcccctgc ccttgtgcgc caatgagcgg gtaaatggcg ggatcgacct gttttttgct
     1261 tttacgccct ttctgaccat aaagatagaa accccgacca ttttttctgc ctttgcgatc
     1321 gtcgttcaaa attgaagaaa caacatttgc aggcgcgcta aaacgttctc cataagcggc
     1381 ttccagtaca ggaataattt tagtcccggt gtcgattcct acctcatcca aaagttggat
     1441 tggacctacc ggaaaaccaa atttcactag cgcggcatca atgtgctcta cccgttcacc
     1501 ttcggtcagc atgcggatag cttcattaat gtaaggcgct aagatgcgat tgacgtaaaa
     1561 cccggctttg tcacgcacga caatgggcgt tttgccctgt tttttcgcca gttttaccgt
     1621 agtggcgatg gtttgcgctg atgtacccgc atgaggaata atctccacca gcggcatttt
     1681 ttccaccgga ctgaagaaat gcaggccgat aacttgctca ggtcgcgtgg cgtgagcggc
     1741 gatatcacca atcggtaaag atgacgtatt cgaagcaaag atggtatgag cggcgctatt
     1801 ttgctcaact tccgccacca tctgttgttt caattcgaga ttttcaaaca ccgcttcaat
     1861 aatcagatcg cgatgggcaa agccgcgata gtccgtcgtt ccggagatta atgccagctg
     1921 tttgtcacgt tcgctggctt tgagatgacg acggcgaact ttgccctcca gctgatccca
     1981 actgtacttc agcgcatgat ttatgccctg cgggttgata tctttaattc tgaccggaag
     2041 ccccgcttta caagcagtga cataagcaat accgccgccc atcaagccac cacctaaaat
     2101 tcccacgctg tttaatggcg caggcggtgc atcactaccg ggatctttct tcacgtccgt
     2161 actggcaaaa aagatactac gcagcgcctg cgattgtggc gtcatcgcca gttcgccaaa
     2221 cgcccgagct tcggcgtcat aaccgctgct ggtgccctgc gctaatcccg tttcaacaac
     2281 ctccaggatg cgttctgtcg ccggataatt gccttgagtt ttgtgttctg ttttcttgcc
     2341 gaccattttg aacagcagcg cacgacctaa cggccccgcc agaatacgct cgcgtacagg
     2401 tagagggcgg gaagatgggc gatccttctt cgccagctca acagcgactt ccagcaaaat
     2461 ggagtgcgga acaacgtcat ccaccagccc cagctttaat gcctgtttcg cccgaagttg
     2521 ttttccggtg aggatcatct ctaatgctgt gctgacgcct atcagacgcg gtaaacgctg
     2581 ggtgccgcct gaaccgggta acaatccaag ttgtacttca ggcaaaccga gcaccgtttt
     2641 aggatcgtca gtacaaacgc gaccgtggca cgccagcgcc aactccagcc caccacccag
     2701 gcaagcgcca tgaatagccg cgataaccgg aatgggcaaa gcatgaatct ccgccatcaa
     2761 ctgttggccc tgccgcgcca gtgcttccgc ttcttgcgcc gttttgcagt tgccgatcat
     2821 gttgatgtct gcgccagcaa tgaagttgtc cggtttagcg gagacaaaca ccacgcctcg
     2881 caactctttg ttttcacgga gttgcttaat aatggcgcgc acctgcgagg caaactccgc
     2941 cttcagggta ttcattttct cacccggtac gtcgatggtg ataacggcaa tgttgtccag
     3001 acgaacatta agggtaaacg ctgatgtcat ttccattatt ccgcctccag aaccattgcc
     3061 gcgccaagcc caccggcagc acaggcggta actaaaccaa atccaccgcc gcgacggcga
     3121 agttcatgca atgtctgggt aatcatccgt gcgccggtcg ccgcgaaggg atgtccgtaa
     3181 gcaatcgaac cgccaagcac gttaaatttg ctatcgtcca cttcgccagt ggcatgtgca
     3241 cgccccagta cttcacgagc aaaacgttca ctacccagca actgaatatt cgccagtgtc
     3301 tgagctgcaa aggcttcgtg catatcgatc aatgtcagat cgctcattgt caaaccggca
     3361 cgttccagcg ccagcggtgt tgaccaggcc ggaccgagca acatgtcctg ccagacatca
     3421 atcgcagtaa atgcgtagct gcgcagatac cccagcggca ccagccctaa ttctttcgcc
     3481 cgggattcag tcatcaggat caccgctgcc gcgccatcgg tcagcggcgt actgtttgcc
     3541 gccgttaccg ttccgtgttt gcgatcaaac gccgggcgca gctttgcgta atcggcaagc
     3601 gaggaattac cgcgaatatt gttgtcttcg acaagcggtt gtttataagg agggataaag
     3661 gcagtcatca cctcttcttt gagttttccg tctgaccatg cctgagcggc acgctgatgc
     3721 gaacggtgcg ctaatgcatc ttgctgttct cgggtgatgc cgtaggtttt cgccatttgt
     3781 tcggcggtgt cgcccatccg caagccagta gaatattctg ctaccgcagg cggtacgggc
     3841 attaagtcgc gcaaacgcag gcgagagaag agtttcagtc gctggctcat ggttcgagct
     3901 ttgttgacat caaccagcac gcgcgccagt tttttactga cgccaattgg caatacggaa
     3961 gaggaatctg ccccaccggc aatccccgct cggatagttc ccgccatcag gctttctgcg
     4021 acgtttgcaa ccgcctggaa actggtagcg caagcgcggc tgacgctgta agcatcggta
     4081 tgcacattca ttccggtacc gagaacaatt tcacgcgcaa tgttgggggc ttcaggcatt
     4141 tgtacgacct gaccaaagac cagctgttca atcacttcag cggggatctc gctgcgtgcc
     4201 agcagttcgc ctaccaccat cttccctaaa tcaaccgcgg gaatgccatg aaaagccgtc
     4261 gcctggcggg caaaaggcgt acgtaaaccg ctaacaatgg cgatacgatc gccctggcgg
     4321 gtaaccagcg gtaaaacctg acccataaca cacccctgta aaaaaataaa taaagtggtc
     4381 tgacctgatc atagtcttaa ccattttttt acatttagcc aagcggagaa aaaggaaagt
     4441 gggagctatg acacagtgaa gacaggagaa agaaaagaaa acgcccctgc cagcaactga
     4501 caggggcgta cgtacccgag aggaattaac gcagacccag ctggaagatc agcatttcag
     4561 cttcgcaggc aaaagtgaaa tcgatatcca ggcgcacacc gtcagactct tcagtgaaag
     4621 tcggggtgat tttacacggt tcggattcca cgctacgggc tttttcagtc agcgccgcca
     4681 gcgtttgttc tgcttctgcg cggcttgcaa acacgcggct gtaagacgcg gtgcagtcgg
     4741 agttgtccat aatggtgcca acatccatac agcagcaaac cggggtttca tcagcactac
     4801 atttactcat cgttgatttc ctctgtatgt gcacccaagg tgccagataa acgttgtgga
     4861 tattttacgc ttccggaaag tgctgctcca gttgttaatt ctgcaaaatc ggataagtga
     4921 ccgaaatcac acttaaaaat gatctaaaac aaaattcacc cgaatccgcg agtgcgcaac
     4981 ctccaaattt tgccagctgg atcgcgtttc ttagatcata tttgaaaaaa gatggaaaca
     5041 tacttgcaac attccagctg gtccgaccta tactctcgcc actggtctga tttctaagat
     5101 gtacctcaga ccctacactt cgcgctcctg ttacagcacg taacatagtt tgtataaaaa
     5161 taaatcattg aggttatggt catgagccag aaaaccctgt ttacaaagtc tgctctcgca
     5221 gtcgcagtgg cacttatctc cacccaggcc tggtcggcag gctttcagtt aaacgaattt
     5281 tcttcctctg gcctgggccg ggcttattca ggggaaggcg caattgccga tgatgcaggt
     5341 aacgttagcc gtaaccccgc attgattacc atgtttgacc gcccgacatt ttctgcgggt
     5401 gcggtttata ttgacccgga tgtgaatatc agcggaacgt ctccgtctgg tcgtagcctg
     5461 aaagccgata acatcgcgcc tacggcatgg gttccgaaca tgcactttgt tgcaccgatt
     5521 aacgaccaat ttggttgggg cgcttctatt acctctaact atggtctggc aacagagttt
     5581 aatgatactt atgcaggcgg ctctgtcggg ggtacaactg accttgaaac catgaacctg
     5641 aacttaagcg gtgcgtatcg cttaaataat gcatggagct ttggtcttgg tttcaacgcc
     5701 gtctacgctc gcgcgaaaat tgaacgtttc gcaggcgatc tggggcagtt ggttgctggt
     5761 cagattatgc aatctcctgc cgggcaaact cctcaagggc aagcattggc agctaccgcc
     5821 aacggtatcg acagtaatac caaaatcgct catctgaacg gtaaccagtg gggctttggc
     5881 tggaacgccg gaatcctgta tgaactggat aaaaataacc gctatgcact gacctaccgt
     5941 tctgaagtga aaattgactt caaaggtaac tacagcagcg atcttaatcg tgcgtttaat
     6001 aactacggtt tgccaattcc taccgcgaca ggtggcgcaa cgcaatcggg ttatctgacg
     6061 ctgaacctgc ctgaaatgtg ggaagtgtca ggttataacc gtgttgatcc acagtgggcg
     6121 attcactata gcctggctta caccagctgg agtcagttcc agcagctgaa agcgacctca
     6181 accagtggcg acacgctgtt ccagaaacat gaaggcttta aagatgctta ccgcatcgcg
     6241 ttgggtacca cttattacta cgatgataac tggaccttcc gtaccggtat cgcctttgat
     6301 gacagcccag ttccggctca gaatcgttct atctccattc cggaccagga ccgtttctgg
     6361 ctgagtgcag gtacgactta cgcatttaat aaagatgctt cagtcgacgt tggtgtttct
     6421 tatatgcacg gtcagagcgt gaaaattaac gaaggcccat accagttcga gtctgaaggt
     6481 aaagcctggc tgttcggtac taactttaac tacgcgttct gataacgcgt tcgcctggat
     6541 aaagtcacct gcatagcagg tgactttaac tcccccactt caccgaaagt agtgtcctca
     6601 ttgcttacct cctgagtttt gcaaacagcc tgttggcagc ttgccctttc aaatcaataa
     6661 gcggtatcca cagacaaacc tgaagggaaa ggcatatttt caggcgttct gctcgtcctt
     6721 ctcaaagagt ttacttttct gcatttccag gatactcaac ccccctggct attgtgcgct
     6781 catacactca aattaaagat aggttctaaa taaatgagcg t
//
LOCUS       DAPGWB010000209         6796 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.211, whole genome shotgun sequence.
ACCESSION   DAPGWB010000209 DAPGWB010000000
VERSION     DAPGWB010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6796
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.211"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(124..1773)
                     /gene="pgi"
                     /locus_tag="RHX79_004248"
     CDS             complement(124..1773)
                     /gene="pgi"
                     /locus_tag="RHX79_004248"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDV2199350.1"
                     /translation="MKNINPTQTAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSAT
                     FGDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALR
                     NRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDL
                     GPYMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN
                     AHSARDWFLKAAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSA
                     IGLSIVLSIGFDNFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEA
                     ILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLI
                     HQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKD
                     PATLDYVVPFKVFEGNRPTNSILLREITPFSLGALIALYEHKIFTQGVILNIFTFDQW
                     GVELGKQLANRILPELKDGKEISSHDSSTNGLINRYKAWRG"
     gene            2298..3647
                     /gene="lysC"
                     /locus_tag="RHX79_004249"
     CDS             2298..3647
                     /gene="lysC"
                     /locus_tag="RHX79_004249"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HDV2199351.1"
                     /translation="MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGI
                     TNLLVALAEGLEPGERFEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAA
                     ALATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDVA
                     ALAELAALQLLPRLNDGLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVD
                     IWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFV
                     GSSKDPRAGGTLVCNKTENPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILAR
                     HNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALI
                     GNDLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGEDAEQVVQKLHFNLFE"
     gene            3792..4718
                     /locus_tag="RHX79_004250"
     CDS             3792..4718
                     /locus_tag="RHX79_004250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HDV2199352.1"
                     /translation="MATLMEKDALLNGASQCIAFLSNIIDNCSVSSHQDSGDALKRLV
                     SYRDYLYSTPAELVDFTQGKILLQQVRTQYQHEFNNTTHSENKASFDSIWQRLTNHEV
                     TPQQHPIGFVLGGQPGAGKSSLIELAKRETKDNIMIINGDDFRFLHPDFNYIYQNYGD
                     DFVTHTAKFSGETVERAIERAIVSKLNIVVEGTFRNAATPLQTLKKLKDAGYQTEVMI
                     KTTSAALSWESTNERYNKDKEAGNIARKVDKNHHDIVTGLLAENARKVFASNLADKFA
                     VYSREKMIFSSQAATNDDIATLIQNEISGNTQ"
     gene            complement(4754..5545)
                     /locus_tag="RHX79_004251"
     CDS             complement(4754..5545)
                     /locus_tag="RHX79_004251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001130549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDV2199353.1"
                     /translation="MPLNGVSAAMRERVSQQLKEIERRYDVKVLYACESGSRGWGFAS
                     PDSDYDVRFLYVHPLEWYLRVESPRDVIELPIDDELDVSGWEWRKALGLLKGANPTLI
                     EWLDSPVVYQQDEETITAFKAMVPMWFSPLRARWHYYSMAQKNFPGYLQGDEVRLKKY
                     FYVLRPLLAVRWVEAGKGVPPMRFAELLAGSELDAPLRAEIDELLERKQRAGEAEYGP
                     RRPLLHAFIRAELARGEIPPLLPDSREGDVKELDSLMYQTVMRRA"
     gene            complement(5551..6678)
                     /locus_tag="RHX79_004252"
     CDS             complement(5551..6678)
                     /locus_tag="RHX79_004252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000592028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HDV2199354.1"
                     /translation="MIKKISVRKDQLALLSRNGDYYKVLHAGEHLLPWLNTPEVLLIT
                     LDGSEVPDVLADYLRRFQPDWVEKYCLVADLSEIEAGALYMDGILQEILPPSTRRLYW
                     RVEDDLTLVRMNTQQVQVQTEVMNAVLQPRRKGAVKGRDAILTVQVPAWHVGVLKIDG
                     ETQALLPPGLTAYWKINHLVDAEVVDTRLQVLEVSGQEILTKDKVNLRINLAANWRYS
                     DVLLAFSQLTKPIDHLYRELQFALREAVGTRTLDELLEDKQVIDDVVSEQVKSRMLPF
                     GMEIASLGVKDIVLPGDMKNILAQLVEAEKSAQANVIRRREETAATRSLLNTAKVMEN
                     NPVALRLKELETLERVAERIDNISVFGGLDQVLHGLVNIKG"
BASE COUNT         1674 a         1766 c         1630 g         1726 t
ORIGIN      
        1 cacgattaaa aatctatttt aggattaacc tcacggtatg atttccgtta aatcacagac
       61 aaggggattt atctgataaa acaatgccga cataacgtcg gcattgttat taaggttttt
      121 aaattaaccg cgccacgctt tatagcggtt aatcagacca ttggtcgagc tatcgtggct
      181 gctgatttct ttgccatctt tcagctctgg cagaatacgg ttcgccagct gtttacccag
      241 ctccacgccc cactggtcga aggtgaagat gttcagaatc acgccctgag taaagatttt
      301 gtgctcatac agcgcaatca acgcccccag gctgaacgga gtgatttcgc gcagcaggat
      361 ggagttggtc gggcggttac cttcgaacac tttgaacggc accacgtagt caagcgttgc
      421 cggatcttta ccctgatcgc gatattcctg ctcaaccact tcgcgggatt taccaaacgc
      481 cagcgcttcg gtctgggcga agaagttaga cagcagtttc tggtgatgat cagagagcgg
      541 gttatgggtg atagccggag cgatgaaatc gcacggtacc attttggttc cctggtggat
      601 cagctggtag aacgcgtgct gaccgttagt gcctggttca ccccagataa tcgggccagt
      661 ctggtaatcc acaacgttac cgttacggtc aacatactta ccgttggact ccatattgcc
      721 ctgctggaag tacgccgcga aacggtgcat atactggtca tacggcagaa tcgcctcagt
      781 ttccgcacca aagaaattgt tgtaccagat gccaatcagc gccagcagga caggcaggtt
      841 tttctcggca ggcgtggtgg agaaatgctt gtccatcgcg tgtgcgccag aaagcagttc
      901 aacgaagtta tcaaagccga tggagagaac aatcgacagg ccaatcgctg accacaaaga
      961 gtaacgaccg ccgacccagt cccagaactc gaacatgttg gcagtatcaa taccaaactc
     1021 gccaacggct ttggcattgg ttgagagcgc cgcaaagtgt ttcgcaacgt gtttttcatc
     1081 acctgccgct ttcaggaacc agtcacgcgc gctatgggcg ttggtcatgg tttcctgagt
     1141 ggtgaaggtt ttagatgcta ccaggaacag cgtggtttcc gggtttactt ttttcagcac
     1201 ttcagcgatg tgagtcccat cgacgttaga aacaaagtgc atgttcaggt gatttttgta
     1261 cggacgcagt gcttcggtca ccatgtacgg gccgaggtca gaaccgccga tcccgatgtt
     1321 cactacgtca gtgattgctt tgccggtata acccttccac tcaccggaga taatcgcttc
     1381 cgagaaggtt ttcatcttct ccagcaccgc gttgacttcc ggcattacgt ctttgccatc
     1441 aaccaaaatc ggggtattgc tacggttacg cagcgctacg tgcagcacag cgcggttttc
     1501 agtgcggttg atcttctcgc cagagaacat cgacttaatc gcgcccgcca gatcgcactc
     1561 tttcgccaga tcttgtaatt tcgccagcgt ctcttcagtg atgcggtttt tggagtaatc
     1621 caccagcatc tgatcgccga aggttgcgga gaacttagaa aaacgatcgc cgtctttagc
     1681 aaaaagatcg gcgatcgtaa cgtctttcat ttcatcgaag tgtttctgta gtgcctgcca
     1741 ggcagcggtc tgcgttggat tgatgttttt cattagcaat actcttctga ttttgagaat
     1801 tgtgactttg gaagattgta gcgccagtca cagaaaaatg tgatggtttt agtgccgtta
     1861 gcgtaatgtt gagtgtaaac ccttagcgca gtgaagcatt tattagctga actactgacc
     1921 gccaggagtg gatgaaaaat ccgcatgacc ccgtcgttga caaccgcccc gctcaccctt
     1981 tatttataaa tgtactacct gcgctagcgc aggccagaag aggcgcgttg cccaagtaac
     2041 ggtgttggag gagccagtcc tgtgataaca cctgaggggg tgcatcgccg aggtgattga
     2101 acggctggcc acgttcatca tcggctacag gggctgaatc ccctgggttg tcaccagaag
     2161 cgttcgcagt cgggcgtttc gcaagtggtg gagcacttct gggtgaaaat agtagcgaag
     2221 tatcgctctg cgcccacccg tcttccgctc ttcccttgtg ccaaggctga aaatggatcc
     2281 cctgacacga ggtagttatg tctgaaattg ttgtctccaa atttggcggt accagcgtag
     2341 ctgattttga cgccatgaac cgcagcgctg atattgtgct ttctgatgcc aacgtgcgtt
     2401 tagtagtcct ctcggcttct gctggtatca ctaatctgct ggtcgcttta gcggaagggc
     2461 tggaacctgg cgagcgattc gaaaaactcg acgctattcg caacatccag tttgccattc
     2521 tggaacgtct gcgttacccg aacgttatcc gtgaagagat tgaacgtctg ctggagaaca
     2581 ttactgttct ggcagaagcg gcggcgctgg caacgtctcc ggcgctgaca gatgagctgg
     2641 tcagccacgg cgagctgatg tcgaccctgc tgtttgtcga aatcctgcgc gaacgcgatg
     2701 ttcaggcaca gtggtttgat gtacgtaaag tgatgcgtac caacgaccga tttggtcgtg
     2761 cagagccaga tgtagccgcg ctggcggaac tggccgcgct gcagctgctc ccacgcctca
     2821 atgacggctt agtgatcacc cagggattta tcggtagcga aaataaaggt cgtacaacga
     2881 cgcttggccg tggaggcagc gattatacgg cagccttgct ggcggaggct ttacacgcat
     2941 ctcgtgttga tatctggacc gacgtcccgg gcatctacac caccgatcca cgcgtagttt
     3001 ccgcagcaaa acgcattgat gaaatcgcgt ttgccgaagc ggcagagatg gcaacttttg
     3061 gtgcaaaagt actgcatccg gcaacgttgc tacccgcagt acgcagcgat atcccggtct
     3121 ttgtcggctc cagcaaagac ccacgcgcag gtggtacgct ggtgtgcaat aaaactgaaa
     3181 atccgccgct gttccgcgcg ctggcgcttc gtcgcaatca gactctgctc actttgcaca
     3241 gcctgaatat gctgcattct cgcggcttcc tcgcggaagt tttcggcatc ctcgcgcggc
     3301 ataatatttc ggtagactta atcaccacgt cagaagtgag cgtggcatta acccttgata
     3361 ccaccggttc aacctccact ggcgatacgt tgctgacgca atctctgctg atggagcttt
     3421 ccgcactgtg ccgggtggag gtggaagaag gtctggcgct ggtcgcgttg attggcaatg
     3481 acctgtcaaa agcctgcggc gttggcaaag aggtattcgg cgtactggaa ccgttcaaca
     3541 ttcgcatgat ttgttacggc gcatccagcc ataacctgtg cttcctggtg cccggcgaag
     3601 atgccgagca ggtggtgcag aagctgcatt ttaatttgtt tgagtaatat ttccctactg
     3661 gcgtataacg ctcaccgatt gttatacgcc atcctcactg aaaacataga ttaaataata
     3721 tctgaaaagc aaaatcactc ctgtagaaca gtattataat caccgaaaaa tatcatttaa
     3781 caggagtgtt aatggctact ttaatggaaa aagatgcact tttaaacgga gccagtcagt
     3841 gcatcgcgtt tttatcaaat atcattgata attgctcagt ttcgtcgcat caggattcag
     3901 gcgatgctct caagcgatta gtcagctatc gcgattatct ttattctacc cccgctgaac
     3961 ttgttgattt tacacaaggt aagattctcc ttcagcaggt aagaactcaa tatcagcatg
     4021 aattcaacaa tactacgcat tcagaaaata aagcatcttt tgattctatt tggcagcgtc
     4081 tgacaaatca tgaagtcaca ccgcaacagc atcccattgg ttttgtttta ggtgggcaac
     4141 ccggagcagg taaatcatct ctgattgaat tagccaaaag agagacaaaa gataatataa
     4201 tgattattaa cggtgatgat tttcgatttc tacaccctga ttttaattat atctaccaaa
     4261 attatgggga tgattttgtt acccatacag cgaaattttc cggcgaaacg gtcgaacgtg
     4321 caattgagag agcgatagtc agtaaactca acattgttgt cgaaggaaca tttcgtaatg
     4381 ccgcgacgcc gttacaaaca ttaaaaaaac tcaaagatgc aggctaccaa acagaagtca
     4441 tgataaaaac aacctcagcg gcattaagct gggaaagcac caatgaacgg tataataagg
     4501 acaaagaggc gggaaatatt gcccgaaaag tggataaaaa ccaccatgat atcgtcaccg
     4561 gtttgctggc agaaaatgcc cgcaaggtgt ttgcttcaaa cctggcagat aagtttgcgg
     4621 tgtattcgcg tgagaagatg atatttagtt cacaagcggc aacgaatgac gatattgcaa
     4681 cgcttataca gaatgaaatc agcgggaata cacaataata ataagagctg atggcgtgaa
     4741 ataacgccgg gctttatgcc cggcgcatta ccgtctggta cattaagcta tccagttcct
     4801 taacgtcccc ttctctgcta tccggtaaca gcggtggaat ttccccacgc gccagttccg
     4861 cacgaataaa cgcatgtaac aatggacggc gcggaccata ttccgcttct cctgcgcgct
     4921 gtttacgttc cagtaattcg tctatttctg cacgtaacgg cgcatcaagt tcgcttcccg
     4981 ccagtaactc agcaaagcgc attggcggta cgcctttacc cgcttcgacc cagcgcacgg
     5041 ccagcagcgg acgcagcacg taaaagtatt ttttcagtcg aacttcgtcg ccctgcaaat
     5101 atccggggaa gtttttctgc gccatcgaat agtaatgcca gcgcgcacgc agcggagaaa
     5161 accacattgg gaccattgcc ttaaacgccg ttatcgtttc ttcatcttgt tgataaacca
     5221 ccggagaatc cagccattct atcagcgtcg ggttcgcgcc tttcaataat cccagcgcct
     5281 tacgccactc ccaaccggaa acatctaact cgtcgtcgat gggcagctca ataacatcgc
     5341 gcggtgactc tactcgcaga taccattcca gcgggtgaac atacaaaaac cgtacatcgt
     5401 agtcgctgtc gggcgaggca aatccccagc cgcggctccc tgattcacag gcgtacagta
     5461 ctttcacatc ataccgccgt tcaatttctt ttaactgctg cgataccctt tctcgcatcg
     5521 cagcactgac tccatttaat ggcatgttac tcaccctttg atattaacca acccatgcag
     5581 aacctgatcc agaccgccaa atacagagat gttatcgatt cgttcagcca ctctctccag
     5641 cgtttccagt tcttttaagc gtaacgctac cgggttgttt tccatgactt tagcggtatt
     5701 gagtaacgaa cgcgtcgctg ccgtttcttc acgtcggcga atcacattgg cctgcgcgga
     5761 tttctccgcc tcaaccagct gcgcaaggat atttttcata tcgccaggca ggacgatatc
     5821 tttcacccct aacgaggcaa tctccatacc aaatggcaac atgcgcgatt tcacctgttc
     5881 gctgacaacg tcatcaatga cctgtttatc ttccagcaat tcatccaacg tacgcgtacc
     5941 taccgcttca cgcagggcaa attgtaattc ccgatacaaa tgatcaatcg gcttcgttaa
     6001 ctggctaaat gccaataaca cgtcgctgta gcgccagtta gcggcgaggt taatccgcag
     6061 attgacctta tctttcgtta agatttcttg cccgctgact tccagtacct gcaagcgggt
     6121 gtcaaccact tcagcgtcaa ccagatggtt aattttccag tatgcggtca gccccggcgg
     6181 taacagcgcc tgcgtttcac catcgatttt cagcacgcct acatgccagg ccggaacctg
     6241 caccgttagt attgcatcgc ggcctttaac tgcccctttg cgccgtggtt gcaataccgc
     6301 attcatcacc tccgtttgta cctggacttg ctgcgtattc atccgcacca gtgtcaaatc
     6361 atcctctaca cgccagtaca aacggcgcgt tgatggcggc aggatctcct gcaaaatacc
     6421 gtccatatac aacgccccgg cttcaatctc cgacaagtct gccaccaggc aatatttctc
     6481 cacccaatca ggctgaaagc ggcgcaaata atccgccagc acgtcgggaa cttcgctgcc
     6541 atcgagcgta atcagcaaga cttctggcgt atttaaccag ggtaaaagat gctcgcctgc
     6601 atgtagcact ttgtagtaat cgccgtttct ggagagtaat gccagctgat cttttcttac
     6661 gcttattttt ttaatcatta tctattcctt gcttaacagc cgtcgcggaa gcagacacga
     6721 agcgacaggg gaattccctt ttgcctgtta cccggcatct ttatcggcga cgttatcggg
     6781 gatcgctgac tgcgca
//
LOCUS       DAPGWB010000210         6467 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.212, whole genome shotgun sequence.
ACCESSION   DAPGWB010000210 DAPGWB010000000
VERSION     DAPGWB010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6467
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.212"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(56..352)
                     /locus_tag="RHX79_004253"
     CDS             complement(56..352)
                     /locus_tag="RHX79_004253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HDV2199355.1"
                     /translation="MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGY
                     YWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR"
     gene            complement(566..1852)
                     /gene="thrC"
                     /locus_tag="RHX79_004254"
     CDS             complement(566..1852)
                     /gene="thrC"
                     /locus_tag="RHX79_004254"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDV2199356.1"
                     /translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID
                     EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP
                     TLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG
                     KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR
                     LLAQICYYFEAVAQLPQEARNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN
                     DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE
                     TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE
                     TLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ"
     gene            complement(1853..2785)
                     /gene="thrB"
                     /locus_tag="RHX79_004255"
     CDS             complement(1853..2785)
                     /gene="thrB"
                     /locus_tag="RHX79_004255"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDV2199357.1"
                     /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETF
                     SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS
                     VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI
                     ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ
                     PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTA
                     QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN"
     gene            complement(2787..5249)
                     /gene="thrA"
                     /locus_tag="RHX79_004256"
     CDS             complement(2787..5249)
                     /gene="thrA"
                     /locus_tag="RHX79_004256"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HDV2199358.1"
                     /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT
                     NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK
                     HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY
                     LESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACL
                     RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF
                     QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR
                     VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV
                     TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT
                     GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA
                     LLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD
                     FLREGFHVVTPNKKANTSSMDYYHLLRHAAEKSRRKFLYDTNVGAGLPVIENLQNLLN
                     AGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK
                     LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG
                     KVLRYVGNIDEDGACRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG
                     NDVTAAGVFADLLRTLSWKLGV"
     misc_feature    complement(5275..5394)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00506"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Thr leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00506"
     gene            complement(5330..5395)
                     /gene="thrL"
                     /locus_tag="RHX79_004257"
     CDS             complement(5330..5395)
                     /gene="thrL"
                     /locus_tag="RHX79_004257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thr operon leader peptide"
                     /protein_id="HDV2199359.1"
                     /translation="MKRISTTITTTITITTGNGAG"
     gene            complement(5609..6295)
                     /locus_tag="RHX79_004258"
     CDS             complement(5609..6295)
                     /locus_tag="RHX79_004258"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HDV2199360.1"
                     /translation="MRITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPAT
                     RWVAHGSGDIIDNIKVFPTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKS
                     SWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQ
                     QPAKSDTTADQHQLQALRERVMALLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRL
                     LHDIEKNITK"
BASE COUNT         1548 a         1787 c         1570 g         1562 t
ORIGIN      
        1 cgcgccagcg tcgcatcagg cgctgaatgc cggattgtta cccggcattt gtcatttagc
       61 ggtgatgttt gcctggacca tgaccgccgt gatgatcatg aggagctttc ttatggtggc
      121 gcggcggtgg cggcggtccg tgtgggtgcc agcgattgcc tcgccattca taatgttgtt
      181 tccaccagcc gtggtcgcgc cagtgacctc catcccagta atagccacga ttatcacgat
      241 cgcctatctg taattttact gacgggacta acgtaatttc cgcagcctgt gctgccatgg
      301 gagcgaccag aaccagggaa agtgcgagta cgatagattg catctttttc acaggttact
      361 ccttttatca ttgcccgtta tgggtcgata tccagagatt acgcgatgag aacgacggtt
      421 gttattctcc gcaatcctaa tctctaagtt accgcattta ttgagaattt ctcctttttc
      481 cctgtcgttt ttctccataa tttcttcata aaaaagccgg gctgcataaa agcaaacccg
      541 gcctgattga gataatgaat agattttact gatgattcat catcaattta cgcaacgcag
      601 caaaatcggc gggcagatta tgtgaaagca agggtaaatc agcacgttct gccagctctt
      661 ttggcagatc caacgtttca ccgagaatcg cttccacgct ctctttaaat ttcgccggat
      721 gcgcggtgcc gaggaacaag ccatattcgc ctggattcaa ctggtcacgc agcgcacgat
      781 acgctacggc agcgtgcggc tccgaggtgt agcccagttc ttttaactca cgcattgtct
      841 gttgcgtggt ttcatcatcc acggctgcat aacccagctc tttcagttgc cagattttgc
      901 ggcggaacaa ctcttccaca cgcggccagt tgttcggctg actcacgtcc atcgcgttgg
      961 ataacgtcgc ctgagtcgct ttgggtgacc actgaccgtc gtgcaggaaa cgtggcacgg
     1021 tatcgttcac gttggtcgca gcaataaaac gtttcaccgg cagaccgagt gacttcgcca
     1081 gcagacccgc cgtcaaatcg ccgaagtttc cgcttggcac cgagacaacc agctggttgc
     1141 gcgcttcctg cggcagctgc gcaacagctt caaagtagta gcaaatctgc gccagcaaac
     1201 ggctgatgtt aatcgagtta gctgagttta accccagcgc cactttcagt tcttcatcat
     1261 caaacgcctg cttcaccagc gcctgacagg catcgaaatc gccgtcgatg gcaacagttt
     1321 cgatattgcc gcccaacgta cagaacagtt tttcttgcag tggactgatt ttgcctcgtg
     1381 gatagaggat aaccactttc acattcggta aaccgtagaa agcatgagcc actgccgctc
     1441 cggtatcacc ggaggtcgcg gtcagaatgg tcactggctt atcgcccgca atatgggtca
     1501 gcatttgtgc cataaagcga ccgccgaaat ctttaaatgc cagcgttggc ccgtggaaca
     1561 attccagaca accgacatcg ctttcaacat tggcgaccgg agccgggaag gcaaacgccg
     1621 cgcgcacgcg ctcttccagg atttcctgcg ggatttcatc accaataaac gccgagagga
     1681 tcttcgcact gcgggtgaca aaatccagct tcagcatctc atcaatttca gtcaggctga
     1741 attccggcag gtcatgcgga aaaaacagcc cctgattttt gcccaacccc tgggttacgg
     1801 cttgcgcaaa gctgacctgc tcgttgtgat ctttcagatt gtagagtttc atttagtttt
     1861 ccagtactcg tgcgcccgcc gtatccagcc ggcaaatatg aacaaaacct tcctgatttt
     1921 gcaggtagtt cttacccaac cagtcggcaa cgcgctgggc ggtatccggc ttgtcacata
     1981 gagcgaacaa ggtcgggccg gagccggaga taccgctcgc taccgcgccg atttccgcga
     2041 ccgcctgccg cgcctgccgg aagccaggca gtaaccgttc acggtagggt tcagcgataa
     2101 catctttcat cagcttcgcg gcaagctcag gctgacggga atagcaggcg tgaatgaagc
     2161 cagccagatg tcgcccgtgc gcaatgcaat cctggcggcg atactgcgcc ggtaaaatag
     2221 ccctggcttc tgccgtcgag actttaatcc ccggatacgc cagcacccac agccactcat
     2281 caaaccctgg cacttgctgg ctgatgatgt cgttttcttc gatcatcaac tgcataccac
     2341 caagaaaaca cggtgccacg ttgtcgtaat gaatgctgcc ggagattcgt ccttccagct
     2401 cgcccatcaa agccagcaaa cgagtgtcat taagcggctt gccacagtgt tcattcatcg
     2461 ccatcagcgc cgcgaccacc gaacaggcgc tggagcctaa gcccgaaccg attggcatat
     2521 tcttttccag agtcatcgcc actggaattt gcttgccaag ctcctggcaa aaacgctccc
     2581 agcactgata aacgatattt tcccgtggtt ctgacggcag cttatcggca aagcgtccga
     2641 ggttgttgag actgaatgtc tctgccgcct caaccgtgac tacatctccg agcaatgcac
     2701 catcaacagg tgtcaccgcc gccccgagca catcaaaccc gacgctcata ttggcactgg
     2761 aagccggggc ataaacttta accatgtcag actcctaact tccatgagag ggtacgtagc
     2821 agatcggcaa agacaccggc agctgtaacg tcattgcccg caccatatcc gcgcagcacc
     2881 aacggcagcg gctgataata gtggctataa aaggccaggg cgttttcgcc atttttcact
     2941 ttgaacagcg gatcattacc atccacttcg gcaatcttca cgcggcaggc accatcttca
     3001 tcaatattgc caacatagcg caaaactttt ccttcatcac gggccttcgc cacgcgcgcg
     3061 gcaaagagat cgtcgagctg tgacagattc gccataaaag cggcaacatc accctcagcg
     3121 ttaaactctg cgggcagcac aggttcaatt tcaatatccg ccagctccag ttcacgtccc
     3181 gtttcacgag cgagaatcaa tagcttacgc gctacatcca taccagaaag atcatctcgc
     3241 ggatccggtt cggtataacc catttcccgc gccagagtag tcgcctcgga gaaactcatg
     3301 ccttcgtcta acttgccgaa gatataagaa agcgaacctg aaagaatgcc ggagaacttc
     3361 atcaattcat caccagcatt gagcagattt tgcaggttct caataaccgg taatccagcc
     3421 ccaacgttgg tgtcatagag gaatttacgc cgcgattttt ccgccgcatg acgcaacaga
     3481 tggtagtaat ccatcgacga ggtgttggcc tttttgttcg gcgtgacaac gtggaaacct
     3541 tcgcgcaaga agtcggcata ttgatccgcc actgcctggc tggaggtgca gtcaacaatg
     3601 accgggttca gcagatgata ttctttcacg aggcgaatta agcgcccgag attaaacggc
     3661 tctttggctt gcgccagttc ttcctgccag ttttccagat ttaggccatg cacattggtg
     3721 agcagtgcct tcgagttggc aacaccgcag acacgtaagt cgatatgttt attcttcagc
     3781 cagctttgtt gacgcttcag ttgctccagc agcgcaccgc caacgccacc gacgccaatc
     3841 acaaacactt cgataacctg atcggtattg aacagcatct gatgagtaac gcgcacgcca
     3901 gtggtcgcat catcgttatt taccacgaca gagattgagc gttcagaaga tccctgagca
     3961 atggcgacaa tgttgatatt ggcgcgggcc agcgcggcaa agaatttcgc cgagatccca
     4021 cgcaaggtgc gcataccatc acctaccacc gagataatgg ccagccgttc cgtcaccgcc
     4081 agcggctcca gtaagccttc tttcagttcc aggtagaact cttcctgcat tgcccgttca
     4141 gcccgcacac agtcgctttg cggaacgcag aaactgatac tgtattcgga agatgattgc
     4201 gtaatcagca ccacggaaat acgggcgcgt gacatcgcgg caaagacgcg cgccgccatg
     4261 ccgaccattc ctttcatccc cgggccggaa acgctgaaca ttgccatgtt attcagattg
     4321 gaaatgccct tgaccggtaa ttcgtcttca tcacgactgg caccaatgag cgtacctggt
     4381 gcttgaggat ttccggtatt tttaatcagg caagggatct ggaactgggc gatgggggta
     4441 atggtgcggg ggtgaagaac tttagcgccg aagtaggaaa gctccatcgc ttcctggtag
     4501 gacatcgact tcaacaacct cgcatcgggc acctgacgcg ggtcgcaggt atagaccccg
     4561 tcaacgtccg tccaaatctc gcaacaatcg gcgcgtaaac aggcagccag caccgccgcg
     4621 gagtagtcgg aaccgttgcg tccaagtacc accagttcgc ctttttcatt accggcggtg
     4681 aaacctgcca tcaacaccat gtgatcagcc ggaatgcggc ttgccgcaat acggcgggtg
     4741 gactcagcaa tatcgacggt agattcgagg taatgcccca ctgccagcag tttttcgacc
     4801 ggatcgataa cggtaacgtt gtgaccacgc gcttctaaca cgccggccat aatggcgatc
     4861 gacattttct cgccacggca aatcagcgca gcgttgatgc tatccgggca ctgccccaac
     4921 aaactaatgc catgcaggac atgttttatt tgggcaaatt cctgatcgac gaaagttttc
     4981 aattgcgcca gcgggaaccc cggctgggcg gcggcgagtc ccgtcaaaag ttcggcaaaa
     5041 atacgttcgg catcgctgat attgggtaaa gcatcctggc cgctaatggt tttttcaatc
     5101 atcgccacca ggtggttggt gattttggcg ggggcagaga ggacggtggc cacctgcccc
     5161 tgcctggcat tgctttccag aatatcggca acacgcagaa aacgttctgc atttgccact
     5221 gatgtaccgc cgaacttcaa cactcgcatg gttgttacct cgttaccttt ggtcgaaaaa
     5281 aaagcccgca ctgtcaggtg cgggcttttt tctgtgtttc ctgtacgcgt cagcccgcac
     5341 cgttacctgt ggtaatggtg atggtggtgg taatggtggt gctaatgcgt ttcatggatg
     5401 ttgtgtactc tgtaattttt atctgtctgt gcgctatgcc tatattggtt aaagtattta
     5461 gtgacctaag tcaataaaat tttaatttac tcacggcagg taaccagttc agaagctgct
     5521 atcagacact ctttttttaa tccacacaga gacatattgc ccgttgcagt cagaatgaaa
     5581 agctgaaaaa tacttactaa ggcgtttttt atttggtgat atttttttca atatcatgca
     5641 gcaaacggtg caacattgcc gtgtctcgtt gctctaaaag ccccaggcgt tgttgtaacc
     5701 agtcgaccag ttttatgtca tctgccactg ccagagtcgt cagcaatgcc atgactcgtt
     5761 cgcgtaaagc ttgcagttga tgttggtctg ccgttgtgtc acttttcgcc ggttgttgta
     5821 ttaatgttgc taattgatag caatagacca tcaccgcctg ccccagattg agcgaaggat
     5881 aatccgccac catcggcaca ccagtaagaa cgtcagccaa cgctaactct tcgttagtca
     5941 gcccggaatc ttcgcgacca aacaccagcg cggcatggct catccatgaa gatttttcct
     6001 ctaacagcgg caccagttct actggcgtgg cgtagtaatg atatttcgcc cgactgcgcg
     6061 cagtggtggc gacagtgaaa tcgacatcgt gtaacgattc agccagcgtc gggaaaactt
     6121 taatattatc aataatatca ccagatccat gtgcgaccca gcgggtggct ggctccaggt
     6181 gcgcttgact atcgacaatc cgcagttcgc taaaacccat cgttttcatt gcccgcgccg
     6241 ctgccccaat attttctgct ctggcgggtg cgaccagaat aatcgttata cgcatattgc
     6301 cactcttctt gaccaaataa ccgcgaacag ggtgatcact gtcaacttat tacgcggtgc
     6361 gaatttacaa attcttaacg taagtcgcag aaaaagccct ttacttagct taaaaaaggc
     6421 taaactattt cctgactgta ctaacggttg aattgttaaa aaatgct
//
LOCUS       DAPGWB010000211         6419 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.213, whole genome shotgun sequence.
ACCESSION   DAPGWB010000211 DAPGWB010000000
VERSION     DAPGWB010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6419
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.213"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            75..782
                     /locus_tag="RHX79_004259"
     CDS             75..782
                     /locus_tag="RHX79_004259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HDV2199361.1"
                     /translation="MAGLDKRVATYHEALEGLTNEMTILAGGFGLCGIPENLIAEVRH
                     RGVTGLTVVSNNCGVDGFGLGVLLESRQIRKVVASYVGENASFEKQVLNGELEAILTP
                     QGTLAEQLRAGGAGIPAFFTATGYGTPVAEGKEVREFNGRPYIMEQAITGDFALVKGW
                     KADWYGNVIYRHTAQNFNPLMAAAGKITVVEVEEIVPPGELDPAAIHTPGIFVNRVIQ
                     GQFEKRIEQRTLSRKGA"
     gene            785..1441
                     /locus_tag="RHX79_004260"
     CDS             785..1441
                     /locus_tag="RHX79_004260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005227332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit B"
                     /protein_id="HDV2199362.1"
                     /translation="MLTREQMAMRVARELRDGYYVNLGIGIPTLVANYIPDGMDVMLQ
                     SENGLLGMGAFPTEDELDADMINAGKQTVTARKGAAIFDSAQSFAMIRGGHVDLTVLG
                     AFEVDVNGNIASWMIPGKMVKGMGGAMDLVAGAENIIVVMTHASKSGESKLLPDCTLP
                     LTGAGCIKRVLTDLALLEIADGAFILRERAPGISVAEIIAKTAGKLFVPEHVPEMQFN
                     "
     gene            1451..2656
                     /locus_tag="RHX79_004261"
     CDS             1451..2656
                     /locus_tag="RHX79_004261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HDV2199363.1"
                     /translation="MQDVVIVAATRTPIGCFHGALAPLSAVDLGAATIRSLLEKTALA
                     AEQIDEVIFGQVLTAGSGQNPARQSALKAGLSHNTPAVTINLVCGSGLKAVHQAVQAI
                     RCGDAQIIIAGGQESMSNAPYFIDGARAGLRLGHTSMKDSVVHDGLWDAFNDYHMGIT
                     AENLAQKYAISRERQDTFALRSKQKAAAAMEAGRFADEITPVSVPQGKKPPRWVNTDE
                     QPRSGTQLEKLAQLKPAFLPGAGSVTAGNASSINDGAAAVMLMRASKAAELGLPVLAR
                     VAGYAVSGVDPAFMGIGPVAATRECLKRCGWTLEDIDLIEANEAFAAQALAVGDELNW
                     DCDKVNVNGGAIALGHPIGASGCRILVTLIYEMARRNAQKGLATLCVGGGQGVALTLE
                     RTTGEHHAN"
     gene            2646..3569
                     /locus_tag="RHX79_004262"
     CDS             2646..3569
                     /locus_tag="RHX79_004262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HDV2199364.1"
                     /translation="MQTEQFAVLGAGLMGVGIATHFARFGHDIWLYDTEQSRIAEIHV
                     VAGGILDELISCEQFTAPEKENVLKRLHGTTSLADIADSQLLIEAIPERLELKHALYT
                     ELETLISPEAIVASNTSGLPPDDLAAKMRYPQRLLIAHFWHPPHFIPLVEIIPGSVTE
                     PKHLHWLQHLLVSLQLEAVLLDRAAPGFVGNRLQFALLREALHIVKSGIASAEVVDQV
                     MRASLGRRYAMVGPLEAADMTGLSTVQDICRHLLPELATGSDMMSLVAEKVERGDIGV
                     RSGQGFYCWDESRKQYIQQRREHQLRFALKP"
     gene            3615..5006
                     /locus_tag="RHX79_004263"
     CDS             3615..5006
                     /locus_tag="RHX79_004263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000114546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDV2199365.1"
                     /translation="MSVLIALAALGLLMLAAYRGYSVILFAPIAALGAVLVTDPGAVG
                     PAFTGLFMEKMVGFVKLYFPVFLLGAVFGKLIELSGFSRSIVAAAINILGRRHAIPVI
                     VLVCALLTYGGVSLFVVAFAVYPFAAELFRQSNIPKRLIPATVALGAFSFTMDALPGT
                     PQIQNIIPTSFFGTNAWAAPWLGLIGSLFIIAVGLIYLERQRRKAQAKNEGYGTELLN
                     EPETPDNINLPNPLIAISPLILVGLLNLLFTWWIPVWYGASHQLELPGLAAPITTDVA
                     KITAIWAVEAALIAGILLVVIFGYRNIHGRLAEGSRTAVGGAILAAMNTASEYGFGAV
                     IAALPGFLVLSKALAAIPDPLLNEAISITTLAGITGSASGGMSIALAAMSDTFIAAAH
                     AANIPLEVFHRVASMASGGMDTLPHNGAVITLLAITGLSHRQAYGGIFAITIIKSLAV
                     LFIIGVYYTTGIV"
     gene            5018..5788
                     /locus_tag="RHX79_004264"
     CDS             5018..5788
                     /locus_tag="RHX79_004264"
                     /EC_number="1.1.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005227337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HDV2199366.1"
                     /translation="MNLQGKTALVTGSTSGIGLGIAQTLANAGAQVILNGFGDVDAAI
                     NAVSRMGKTPGYHEADLSDESQIINMMAYARREFGGVDILVNNAGIQYVSPVESFPVE
                     KWNAIIAINLSSVFHTTRLALPEMRTRNWGRIINIASVHGLVASKDKSAYVAAKHGVV
                     GLTKTIALETAQTGITCNALCPGWVLTPLVQQQIDKRIAQGEDAESARDALLAEKQPS
                     REFVTPQQLGELALFLCSDAAAQVRGVAWNMDGGWVAQ"
     gene            complement(5823..6254)
                     /gene="osmC"
                     /locus_tag="RHX79_004265"
     CDS             complement(5823..6254)
                     /gene="osmC"
                     /locus_tag="RHX79_004265"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin OsmC"
                     /protein_id="HDV2199367.1"
                     /translation="MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEK
                     GTNPEELIGAAHAACFSMALSLMLGEAGFTPTSIDTTADVSLDKVDAGFAITKIALKS
                     EVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS"
BASE COUNT         1475 a         1662 c         1744 g         1538 t
ORIGIN      
        1 agtcacaaat ttaaaattaa caaatcattt tttgccctta atgatgttga aaaggacaac
       61 tggagggcaa ctgtatggct gggttggata aacgggtcgc tacgtatcac gaggcgcttg
      121 aaggacttac caatgagatg acgattctgg caggaggttt tggcctgtgc ggcatcccgg
      181 agaatctgat tgctgaagtt cgccaccgtg gagtaaccgg attaacggtg gtttccaata
      241 actgtggcgt agatggtttt ggactgggtg tactactgga aagccgacag atccgtaaag
      301 tcgtcgcttc ttatgttggc gagaatgctt cgtttgaaaa acaggtgctt aacggcgaac
      361 tggaggcgat tctcacacca caaggaaccc tggcagaaca actgcgcgca ggcggcgcgg
      421 gtatcccggc gttctttact gccaccggtt acggtactcc cgttgccgaa gggaaagaag
      481 tccgcgaatt caacggtcgc ccgtacatca tggaacaggc tatcaccggt gattttgccc
      541 tggtcaaagg ctggaaagcc gactggtacg gcaacgtgat ttatcgtcat accgcgcaaa
      601 acttcaaccc actgatggcg gctgccggaa aaatcaccgt ggtggaagtg gaagaaatag
      661 tgccacctgg tgaacttgat cctgccgcta tccatacccc ggggattttt gttaatcgcg
      721 tcattcaggg gcaatttgaa aaacgcattg aacaacgcac ccttagccgc aaaggagcct
      781 gaccatgtta acccgtgaac aaatggcgat gcgagtcgcc cgcgaattgc gcgatggcta
      841 ttacgtcaat ctcggcattg gtatcccgac cctggtggca aactacattc ctgacgggat
      901 ggatgtgatg ttgcagtcag aaaacggttt gctgggaatg ggcgcatttc ctacggaaga
      961 cgaactggac gccgacatga ttaatgccgg taaacaaacc gttaccgcgc ggaaaggcgc
     1021 ggcaattttc gattcggcgc aatcattcgc catgatccgt ggcggtcatg tggatctgac
     1081 tgtacttggc gcatttgaag tggatgtgaa tggcaacatt gcctcatgga tgatccccgg
     1141 caagatggtt aaaggcatgg gcggtgccat ggatctggtt gccggtgccg agaatattat
     1201 tgtggtaatg acccacgcct ccaaatccgg cgaatccaaa ctgcttcctg actgtaccct
     1261 tccgttgacc ggcgccggat gcatcaaacg cgtcttaacc gaccttgctc tgctggaaat
     1321 tgctgacgga gctttcattc tgcgcgagcg cgcgccggga atcagcgttg cggaaatcat
     1381 cgccaaaacc gccggtaagt tgtttgtgcc ggaacatgtc ccggaaatgc aattcaactg
     1441 aggaatcacc atgcaggacg ttgttattgt tgccgctacg cgcacaccga ttggctgttt
     1501 tcatggcgct ctcgccccac tttctgcggt tgatctcggt gctgccacca tccgttcgtt
     1561 gctggagaaa accgcacttg cagcagaaca gatcgacgaa gtgatttttg gtcaggtcct
     1621 gaccgccgga agcggacaaa acccggcacg acaatcggcg ctcaaagccg ggttaagcca
     1681 caatacaccc gccgttacca tcaacctggt atgtggttcc ggtctgaaag ccgtacacca
     1741 ggcagtgcag gcgatccgtt gcggtgatgc acagataatt atcgcaggtg gccaggaaag
     1801 catgagcaac gcgccctatt ttattgatgg cgcgcgggca ggtttacgcc tcgggcatac
     1861 cagcatgaaa gacagcgtgg ttcatgacgg actatgggat gctttcaatg attaccacat
     1921 gggcattact gcagaaaacc tggcgcaaaa atatgccatc agtcgcgagc gacaggacac
     1981 attcgcgcta cgttctaagc aaaaagccgc tgccgcaatg gaagccgggc gctttgcaga
     2041 cgaaattact ccggtgagcg taccacaagg taaaaaacca ccacgctggg taaataccga
     2101 cgaacaacca cgttccggga cgcaactgga aaaactagcg caactgaaac cggcctttct
     2161 tccgggggcg ggaagcgtca ccgcaggaaa tgcctcttcc attaatgatg gtgccgccgc
     2221 agtcatgtta atgcgcgcca gcaaagctgc tgaactgggc ctcccagtgc tggctcgggt
     2281 ggcaggttat gccgtttctg gcgtcgatcc tgcctttatg ggcattggtc cggtcgccgc
     2341 tacccgcgaa tgtcttaagc gttgcggatg gacgctggaa gatattgatc ttattgaagc
     2401 caacgaggct ttcgcagcgc aggcgctggc cgttggcgac gaactgaact gggattgcga
     2461 caaagtgaat gttaacggcg gcgcaatcgc acttgggcat cctattggcg cttccggttg
     2521 ccgcattctg gtcactctca tttatgaaat ggcgcgacgt aatgcgcaaa aagggctggc
     2581 gacgctgtgc gtcggtggcg gtcagggcgt ggcgctgaca ctggaaagaa ccacaggaga
     2641 acaccatgca aactgaacaa tttgcggtac tgggcgccgg attgatgggc gtggggattg
     2701 ccactcattt cgcccgtttt ggtcatgata tctggctgta cgataccgag cagagccgga
     2761 ttgcagaaat ccacgtagtt gcaggcggaa ttcttgatga gctgattagc tgcgaacagt
     2821 ttactgcccc ggaaaaagag aatgtgctta aacgtctgca cggcacgact tctcttgcag
     2881 acatcgccga ctcgcaacta ctgattgagg cgatcccgga gcgacttgaa ctaaaacacg
     2941 cattatatac cgagcttgaa acgcttattt ctcctgaggc cattgtcgcc agcaatacca
     3001 gcggtctgcc gcccgatgat ctggccgcga agatgcgcta cccgcaacga ctgctgatcg
     3061 cccatttctg gcatccgccg cacttcattc cacttgtgga gattatcccc ggcagcgtta
     3121 ccgagccaaa gcatttgcac tggctgcaac acttgcttgt gtcactgcaa ctggaagcag
     3181 tgttgctgga tcgcgctgcg ccaggatttg tcggcaaccg tctgcaattt gcactgttgc
     3241 gtgaagccct gcatatcgta aaaagcggca tcgccagtgc agaagtggtg gatcaggtga
     3301 tgcgcgcctc gcttgggcga cgttatgcca tggtcggccc gctggaggcc gccgacatga
     3361 ccggactttc gacggtgcag gatatttgtc gccatctgct ccctgaacta gcgactggca
     3421 gcgacatgat gtcattagtt gccgaaaaag tggaacgtgg agacatcggc gtacgtagcg
     3481 gtcagggatt ttactgctgg gatgaatcgc ggaagcagta catccagcag cgtcgggaac
     3541 atcaacttcg cttcgccctt aaaccataac ttctctcgct gtacccacta taacaacgat
     3601 attgaggagt cccgatgagt gtattaatcg cccttgccgc gcttgggctg ctaatgctgg
     3661 cagcctatcg cggatacagc gttatccttt ttgcccccat cgcagcatta ggcgctgttc
     3721 ttgtcaccga tccgggggcc gttggcccag catttaccgg cctgttcatg gaaaaaatgg
     3781 tcggcttcgt gaaattgtac ttcccggtgt ttctgctcgg ggccgtgttc ggaaaactga
     3841 ttgaactttc aggattttct cgttcgattg tcgctgctgc aatcaacatt ctcggccggc
     3901 ggcatgcgat tccggtgatt gtgctggtat gtgcattact cacctatggc ggagtgtcgc
     3961 tgtttgtggt ggcatttgcc gtttatccgt tcgcggctga actgttccgc cagagtaaca
     4021 tcccaaaacg acttataccg gcaacggtgg ccctgggggc attctctttt actatggacg
     4081 ctctgcccgg cacgccacaa attcagaaca ttattcctac cagtttcttt ggcaccaacg
     4141 cctgggccgc gccgtggctg gggcttattg gttcactgtt tatcattgcc gtcgggctta
     4201 tctatctgga gcggcagcgt cgtaaagcgc aggcaaaaaa tgaaggttac ggcacagagt
     4261 tacttaatga acctgaaaca ccagataaca tcaatttacc gaacccactc attgcgattt
     4321 caccattgat tctggtgggg ctgttgaact tgttgtttac ctggtggatc cctgtttggt
     4381 acggtgcgag ccaccaactg gagttgccgg gacttgccgc cccgattacc acagatgtcg
     4441 ccaaaatcac cgcaatctgg gccgtcgaag ctgcgctcat tgccggaatt ttgctggtag
     4501 tgatttttgg atatcgcaat attcatggaa gactggcaga aggaagccgt acagcggtag
     4561 gcggcgcaat tctggctgcg atgaacaccg cctcagaata tggcttcggt gcggttatcg
     4621 ccgccctacc cggttttctg gtgctctcaa aggcgctggc cgccattcct gatccattac
     4681 tcaacgaagc catcagcatc accacacttg ccggaattac cggttcagcg tccggcggga
     4741 tgagtattgc tcttgcggct atgtccgaca cttttattgc cgctgcgcac gctgccaata
     4801 ttccactgga agtttttcac cgcgtggcat ctatggccag tggcggcatg gatacattgc
     4861 cccataacgg cgctgtgatc accctgctgg caattactgg gctgagtcac cgtcaggctt
     4921 acggcggcat cttcgcaatt acgatcatta aaagtctggc cgtgctgttt atcatcggcg
     4981 tgtactacac caccggcatt gtctaaggaa aatcatcatg aatttacaag gtaaaactgc
     5041 gctggtgacg gggtccacca gcggtatcgg actcggtatt gctcagacac tggcaaacgc
     5101 tggcgcgcaa gtgatcctca acggcttcgg tgatgttgac gcggcaatca atgcggtttc
     5161 tcgtatgggt aaaacgcctg gctatcatga ggcagacctc agcgatgaat cgcaaattat
     5221 caacatgatg gcctacgcac ggcgggaatt tggcggtgtg gacattctgg tgaataacgc
     5281 cgggatccag tatgtctccc cggttgaatc tttccctgta gaaaaatgga acgccattat
     5341 cgctatcaat ctctcttctg tctttcacac cacgcgtctg gcactgccag aaatgcgcac
     5401 tcgtaactgg ggtcggatca ttaacattgc ctctgtgcat gggctggtag cgtcgaaaga
     5461 caaatcagct tatgttgcgg caaaacatgg cgtggtggga ctcacaaaga ccattgctct
     5521 ggaaactgcg cagacgggta ttacctgcaa cgcgctctgc cctggctggg tgctgacgcc
     5581 gctggtacaa cagcagattg ataagcgcat tgcgcaaggc gaagatgcgg aaagcgcgcg
     5641 tgacgcctta ctggcagaaa aacagccttc tcgtgaattt gtgactccgc aacaactggg
     5701 tgaactggcg ctgtttctct gttcggatgc ggcagcacaa gtgcgtgggg tggcgtggaa
     5761 tatggatggc ggttgggtag cgcagtaagt gttcgccgga tgacgcgtca tccggcaatg
     5821 ctttacgatt tcaactggta atccagcgta atttccgctt tcagtacctg agagaccggg
     5881 catcctgctt ttgctttctg gatgatgccg tcaaaggtag aggcatcaat acccggcacc
     5941 gcaacttcac tcttcagtgc gattttcgta atcgcaaaac cggcatccac tttatccagc
     6001 gacacatcgg cggtggtatc aatcgatgtt ggcgtgaatc ccgcttcccc cagcattaat
     6061 gaaagcgcca ttgagaaaca tgcggcatgc gctgcgccaa tcagttcttc agggttggtt
     6121 cctttttcgc cttcaaaacg cgtgttaaat ccatacggct gttggttcag cacgccgctc
     6181 tcggtggata ctgttccctt cccgcgtttg atatcgcctt cccagtgtgc ctgacctttc
     6241 ttatggattg tcattgttgc tctcctgtgg gcttaaaaag gaaattatag actacgtgag
     6301 aaaccgcacg aggataagca ggatattccg aataaaatac ggcgaaaata ttacttctgc
     6361 acttaaatta aattcccaca atagataacc tgaaatatat atctcaagag agattgcat
//
LOCUS       DAPGWB010000212         6342 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.214, whole genome shotgun sequence.
ACCESSION   DAPGWB010000212 DAPGWB010000000
VERSION     DAPGWB010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6342
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.214"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(66..1472)
                     /gene="gndA"
                     /locus_tag="RHX79_004266"
     CDS             complement(66..1472)
                     /gene="gndA"
                     /locus_tag="RHX79_004266"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HDV2199368.1"
                     /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIA
                     ENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGN
                     TFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIA
                     AVAEDGEPCVTYIGTDGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQT
                     FTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP
                     LSLITESVFARYISSLKDQRVAASKVLSGPQAQSAGDKAEFIEKVRRALYLGKIVSYA
                     QGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPY
                     FKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGA
                     HTYKRIDKEGVFHTEWLD"
     gene            complement(1587..1985)
                     /locus_tag="RHX79_004267"
     CDS             complement(1587..1985)
                     /locus_tag="RHX79_004267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001236680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WbuC family cupin fold metalloprotein"
                     /protein_id="HDV2199369.1"
                     /translation="MRLIDNDQLEALYEQAEQSERLRSHLLMHSSHQDKVQRLLIALV
                     SSSYVEPHFHELPHQWEMFIVMQGQLQVCLHGKDGEVVKQFIVGENTEINIVEFSPGD
                     IHSVKCLSPRALMMEVKEGPFDPSFAKAFV"
     gene            complement(1972..3183)
                     /locus_tag="RHX79_004268"
     CDS             complement(1972..3183)
                     /locus_tag="RHX79_004268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000761611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDV2199370.1"
                     /translation="MKLALIIDDYLPNSTRVGAKMFHELAQEFIHRGHDVTVITPDTS
                     LQEEVSFDSFQGVKTWRFKSGPLKDVSKVQRAINETLLSWRAWKSIKSRIEEETFDGV
                     VYYSPSIFWGHLVKKIKARCQCPAYLILRDMFPQWVIDAGMLKEGSPIERYFRLFERS
                     SYRQANRIGLMSDKNLDVFRVTNKGYPCEVLRNWASLTPTVLSPEYVPLRKRLGLEDK
                     VIFFYGGNIGHAQDMANLMRLARSMAEHPQAHFLFIGQGDEVELINSLATEWALSNFT
                     YLASVNQEEFKFILSEMDIGLFSLSAKHSSHNFPGKLLGYMVQSLPILGSVNAGNDLL
                     DIVNQNNAGLIHINGEDDKLYHSALLMLYDIDARQRFGLGANKLLKEQFSVESAARTI
                     EMRLEACNAIN"
     gene            complement(3183..4313)
                     /gene="wecB"
                     /locus_tag="RHX79_004269"
     CDS             complement(3183..4313)
                     /gene="wecB"
                     /locus_tag="RHX79_004269"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000734424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HDV2199371.1"
                     /translation="MKKLKIMSVVGTRPEIIRLSRVLAKLDEYCDHILVHTGQNYDYE
                     LNEVFFNDLGVRKPDYFLNAAGKNAAETIGQVIIKVDEVLEIEKPEAMLVLGDTNSCI
                     SAIPAKRRKVPIFHMEAGNRCFDQRVPEETNRRIVDHTADINMTYSDIAREYLLAEGI
                     PADRIIKTGSPMFEVLSYYMPQIDGSDVLSRLNLRPGEFFVVSAHREENVDSPKQLLK
                     LATILNTIAEKYDLPVIVSTHPRTRNRINEQGIEFHPNINLLKPLGFHDYNHLQKNSR
                     AVLSDSGTITEESSIMNFPAVNIREAHERPEGFEEASVMMVGLECERVLQVLEILATQ
                     PRGETRLLRQVRDYSMPNVSDKVVRIVHSYTDYVKRVVWKEC"
     gene            complement(4313..5416)
                     /locus_tag="RHX79_004270"
     CDS             complement(4313..5416)
                     /locus_tag="RHX79_004270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000697809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein
                     CapF"
                     /protein_id="HDV2199372.1"
                     /translation="MKILITGADGFIGRNLCLHLQEAGYSDLVKIGRDSSAAELENGL
                     QDADFVYHLAGVNRPKNVEEFAEGNSNLTQQIVDSLLAKHKNIPIMISSSIQAELDNA
                     YGQSKAAAEKQIERYAAESGAAYFIYRYPNVFGKWCKPNYNSFVATFCHNIANNIDIT
                     INDSSTPVNLVYIDDVCTNAIKLLSETVESGYKTVKPVYSTTVGEVAELLYRFKESRS
                     TLITEAVGTGFTRALYSTWLSYLPADEFAYSVPSYGDARGVFCEMVKTPSAGQFSFFT
                     AHPGITRGGHYHHTKNEKFLVVRGQACFKFEHIITGERYELNVSSDEFKIVETVPGWT
                     HDVTNIGNDELIVMLWANEIFNPDEPDTIARPL"
     gene            complement(5418..6320)
                     /locus_tag="RHX79_004271"
     CDS             complement(5418..6320)
                     /locus_tag="RHX79_004271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016242515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HDV2199373.1"
                     /translation="MRKKYGSDKLKFYIGDVRDYRSILNATRGVDFVYHAAALKQVPS
                     CEFHPIEAVKTNVLGTENVLEAAIANEVKRVVCLSTDKAVYPINAMGISKAMMEKVMV
                     AKSRNVNSDKTVICGTRYGNVMASRGSVIPLFVDQIKAGKAMTITDPNMTRFMMTLED
                     AVDLVLYAFEHGNNGDIFVQKAPAATIETLAIALKELLSVEKHPVNVIGTRHGEKLYE
                     ALLSREEMIAAIDMGDYYRVPPDLRDLNYGKYVEQGDDRITVVEDYNSHNTQRLDVEG
                     MKTLLLKLPFIRALCAGEHYDLDA"
BASE COUNT         1772 a         1509 c         1321 g         1740 t
ORIGIN      
        1 aattggcaaa aaaaagcccg gtgcaatata cgccgggcct caattttatt gttggttaaa
       61 tcagattaat ccagccattc agtatggaac acaccttctt tatcaatgcg cttataagta
      121 tgcgcaccga aatagtcacg ctgtgcctgg atcaggttcg caggcagaac agcggcacgg
      181 tagctatcgt aataggcaac cgcagcagcg aaggtcggaa ccgggatacc gttctgtact
      241 gcataagcaa cgacatcacg cagcgcctgc tggtagtcat cggcaatttg cttgaagtaa
      301 ggagccagca gcaggttagc gatctgcgga ttttcggcat aagcatcggt gattttctgc
      361 aggaactgcg cacggataat gcagccagca cggaaaatct tcgcgatttc gccatagttc
      421 agatcccagt tgtactcttc agacgctgcg cgtagctgag agaagccctg agcgtaagaa
      481 acgattttgc ccagatacag agcacgacga actttttcga tgaactcagc cttgtcgcct
      541 gctgactgag cttgcggacc agagagaact ttagatgcgg caacgcgctg atctttcaga
      601 gaagagatat aacgtgcaaa cacagactcg gtaatcagcg acagcggttc gccgagatcc
      661 agcgcactct ggctggtcca tttgcctgta cctttgtttg ctgcttcatc cagaatcaca
      721 tcaaccaggt agttaccgtc ttcatctttt ttggtgaaga tatctttggt gatgtcgatc
      781 aggtagctgc ttagttcacc gttattccac tcggtaaacg tctgcgccag ttcttcgttg
      841 gaaagattca ggccaccttt aagtagagaa taggcttcag caatcagctg catatcgccg
      901 tattcaatac cgttgtgaac catcttcaca tagtgacctg caccatcggt accaatatag
      961 gtaacgcatg gctcgccgtc ttcagcaacg gcggcgattt tggtcaggat cggcgcaacc
     1021 agttcatagg cttctttctg cccaccaggc ataatggaag gacctttcaa cgcgccttct
     1081 tcgcctccgg aaacaccggt accgataaag ttaaaacctt cggcagaaag ctcacggtta
     1141 cgacgaatgg tgtcctggaa gaaggtatta ccaccatcaa tgatgatgtc acctttatcg
     1201 aggtatggct tgagggaatc aatagcagca tccgtccctg cacctgcttt caccattaac
     1261 aggatgcgac gaggcgtttc cagagattca acaaactctt tcaccgtata gtaaggaacc
     1321 agtttcttgc ctggattttc ggcaatcact tcttccgtct tttcacggga acggttgaaa
     1381 atagagacgg tataaccacg gctttcgatg ttgagcgcaa ggttgcgccc catcactgcc
     1441 ataccgacga cgccgatctg ttgctttgac attgtttact cctgtcagag ggtggtcacc
     1501 gcgatttatg cacggcttga atgtattgct gatgttaact caggatgaag ccaggtggat
     1561 agcgtaagat gtgattcacg atggtattaa acaaatgctt tagcaaagga agggtcaaat
     1621 ggtccctctt tcacctccat catgagagca cgaggagaca agcatttgac actgtgtatg
     1681 tctcccggag aaaactccac aatgttaatt tctgtatttt ctccgacaat aaattgctta
     1741 acgacttctc catctttgcc atgcaaacaa acctgaagct ggccctgcat gacaataaac
     1801 atttcccact gatgaggaag ttcatggaaa tgaggttcta catagctact actgaccagg
     1861 gcaatgagta gtcgttgcac cttatcctga tgcgaactat gcatcaaaag atgggaacgc
     1921 aggcgctcgg attgctctgc ttgttcgtat aatgcctcaa gctggtcatt atcaattaat
     1981 cgcattgcat gcctccagcc tcatttctat cgtccgcgcc gcagactcaa cggagaactg
     2041 ctcttttaac aacttgttcg cgcccagacc aaatcgctgg cgcgcatcaa tgtcataaag
     2101 cattaacagc gcagaatggt aaagcttgtc atcctctcca ttgatatgga ttaatcctgc
     2161 gttattttga ttgacgatgt cgagcagatc atttccagca ttcacgctac ctaatatagg
     2221 tagagactga accatgtatc ctaacaactt acccggaaaa ttgtgagaag agtgtttggc
     2281 agaaagagaa aacaggccta tatccatttc cgataagatg aacttaaatt cttcctgatt
     2341 caccgaagcc agatacgtga aattcgacaa tgcccactca gtagctagag agttaattaa
     2401 ttccacttca tcaccctggc caatgaacag gaaatgagct tgtggatgct ctgccatact
     2461 tcgggcaaga cgcataagat ttgccatatc ctgtgcatgc ccgatatttc ctccatagaa
     2521 gaaaatcact ttatcctcta gaccgaggcg cttacgcagt ggcacatatt ctggggataa
     2581 taccgtcggc gtgagagatg cccagttacg tagaacttcg caaggatagc ccttgtttgt
     2641 cacccgaaaa acatcaaggt ttttatcaga catgagtcca atacggtttg cctgacgata
     2701 agatgatctt tcaaagagac gaaaataacg ttcaattggg gatccctctt ttagcattcc
     2761 agcatcaatt acccattgag gaaacatatc tctcaatatt aaataagccg gacattggca
     2821 gcgggcttta atcttcttaa ctaaatgccc ccaaaaaata gacggtgagt aataaaccac
     2881 accatcgaaa gtttcttctt ctatccggct tttaatagat ttccaggccc gccaagacaa
     2941 aagtgtttca ttgatggctc gctgaacttt acttacatcc ttgagcggac cacttttaaa
     3001 acgccatgtt ttgacaccct gaaagctgtc aaacgacacc tcttcttgca ggcttgtatc
     3061 aggagtaatt accgtaacat catggccacg atgaataaat tcctgagcta actcatgaaa
     3121 catttttgca ccaacacggg tactattggg caggtaatca tctatgatta aagcaagttt
     3181 catcaacatt ctttccagac gactctcttg acgtaatctg tataagagtg aacgattctg
     3241 acgaccttat ccgacacatt tggcatactg taatctctaa cctgccgtaa gagacgtgtc
     3301 tccccgcgag gctgtgtcgc caaaatttca agcacctgaa gcacgcgttc acactccagt
     3361 cccaccatca tgacggatgc ttcttcaaag ccctccggcc gttcatgtgc ttcccgaatg
     3421 tttaccgcag ggaaattcat gatggatgac tcttcagtaa ttgtgccgct gtctgacagc
     3481 acagcacgcg aattcttttg caggtgattg taatcatgga aacctaacgg tttcagcaga
     3541 ttaatgtttg ggtggaattc aatcccttgc tcattaatac gattacgtgt ccgcggatgt
     3601 gtggatacaa taactggcag atcatatttt tcggcaatgg tattaagaat ggtcgcaagt
     3661 ttgagtagtt gcttcggaga atcgacattc tcttcgcggt gtgcactaac gacaaagaat
     3721 tcaccagggc gcaaatttag acgtgacaac acatccgaac catcaatttg aggcatatag
     3781 tacgaaagca cctcaaacat gggactgcca gttttaatga tccggtccgc cgggatacct
     3841 tcagccagga gatattcacg cgcaatatcg ctgtaagtca tattgatgtc agccgtatga
     3901 tcgacaattc gtctgttggt ttcttcaggt acacgctgat cgaaacaacg gttgccagct
     3961 tccatatgga agataggcac tttacgacgc ttggcaggaa tggcagaaat acatgagttg
     4021 gtatcaccca gcaccagcat tgcttcaggc ttttcgattt ctaatacttc atcaaccttt
     4081 atgataacct gaccaatggt ttcagccgca tttttacctg cagcgtttaa gaaataatct
     4141 ggcttacgga caccaagatc attaaagaat acctcgttca attcataatc ataattttga
     4201 cctgtatgga caagaatatg atcacaatat tcgtcaagtt tagccaaaac gcgtgataaa
     4261 cggatgattt caggacgtgt cccaaccaca gacataattt ttaatttttt cattatagag
     4321 gtctcgcaat agtatcaggc tcatcaggat tgaaaatttc gtttgcccag agcatgacta
     4381 ttaattcatc attgccaata ttcgtaacgt catgggtcca gccgggtact gtttcaacga
     4441 ttttaaactc atcggatgaa acattcagtt cataacgttc accggtaatt atatgttcga
     4501 acttgaagca cgcctgtcct cggacgacca ggaacttctc atttttggtg tgatgataat
     4561 gcccaccacg cgttatacct ggatgagctg tgaaaaatga aaactgcccc gctgaaggcg
     4621 tttttaccat ctcacaaaag actcctcggg catctccata agatggcact gagtacgcaa
     4681 actcatcggc tggtagataa cttaaccatg tagaatacag cgcgcgagtg aaccctgttc
     4741 cgacagcctc ggtgataaga gtggaacgac tttctttgaa gcgataaagt aattccgcca
     4801 cctcacctac tgtcgtcgaa tatactggct taacagtttt gtacccgctt tcgaccgttt
     4861 cagacaaaag ctttatcgca ttagtacaaa catcatcaat ataaacaaga ttaacaggcg
     4921 tggatgagtc attgatcgta atatcgatat tgttagcaat attatggcag aaggtcgcca
     4981 cgaacgagtt gtaattaggc ttacaccatt tgccaaaaac atttggataa cgataaataa
     5041 agtatgctgc accactttct gctgcataac gttctatttg tttttcggct gcagctttac
     5101 tctggccata agcattatcc aattcagcct gaatggaaga acttatcata ataggtatgt
     5161 ttttatgctt ggctaaaaga gaatccacaa tctgttgagt tagattgcta ttcccctcgg
     5221 caaactcttc gacgtttttc ggtcgattga caccagcgag atgatagaca aaatcagcat
     5281 cttgcaggcc attttccagc tcagccgcac ttgaatctcg accaatcttg acaaggtcac
     5341 tgtaccctgc ttcctgaagg tgtaagcaca ggttacgtcc gataaaacca tcagctccag
     5401 taatcaggat tttcatttca ggcatccaaa tcgtaatgtt cacccgcgca cagtgcgcga
     5461 ataaaaggta atttcagaag gagtgtcttc atcccttcaa catccagtcg ctgtgtattg
     5521 tgcgagttat aatcctctac aacagtgata cggtcatcac cttgttctac gtattttcca
     5581 tagttaagat cacgcaggtc tggtggaaca cgatagtaat cccccatgtc aatggcggca
     5641 atcatctctt cacgactaag cagagcttca taaagctttt caccatggcg cgttccgata
     5701 acattgacgg gatgtttctc aacactaaga agttctttca gagcaatagc taatgtttca
     5761 atcgttgcag cgggcgcttt ttgaacaaaa atatcgccat tattaccatg ctcaaacgca
     5821 tataggacca gatcgacggc atcttcaagc gtcatcatga agcgggtcat atttgggtca
     5881 gtgatcgtca tcgctttgcc cgctttgatc tgatcaacga ataagggaat gacagaacct
     5941 cgtgaagcca tcacgttgcc gtaccgagta ccgcaaatca ctgttttgtc actattaaca
     6001 ttacgtgatt tcgcgaccat cactttttcc atcattgctt tcgaaatccc catagcattg
     6061 attggataaa cagctttatc agtacttaaa caaacaactc gtttgacttc attcgcaatg
     6121 gcggcctcaa gtacattttc tgtaccaaga acattggtct taacagcttc tataggatgg
     6181 aactcacaag agggaacttg ttttaaagct gcagcatgat atacaaaatc aacaccacgt
     6241 gtagcgttaa ggatactacg gtaatctctt acatctccaa tgtaaaattt taatttatca
     6301 cttccatatt ttttacgcat atcatcctgc ttcttctcat ca
//
LOCUS       DAPGWB010000213         6336 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.215, whole genome shotgun sequence.
ACCESSION   DAPGWB010000213 DAPGWB010000000
VERSION     DAPGWB010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6336)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6336)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6336
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.215"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            57..986
                     /gene="pfkB"
                     /locus_tag="RHX79_004272"
     CDS             57..986
                     /gene="pfkB"
                     /locus_tag="RHX79_004272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707391.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase II"
                     /protein_id="HDV2199374.1"
                     /translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINV
                     ARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGE
                     QYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQNQG
                     IRCIIDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKA
                     KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMV
                     RFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR"
     gene            1087..1377
                     /gene="ghoS"
                     /locus_tag="RHX79_004273"
     CDS             1087..1377
                     /gene="ghoS"
                     /locus_tag="RHX79_004273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HDV2199375.1"
                     /translation="MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEG
                     NIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK"
     gene            1483..2343
                     /locus_tag="RHX79_004274"
     CDS             1483..2343
                     /locus_tag="RHX79_004274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HDV2199376.1"
                     /translation="MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFV
                     KCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHS
                     AFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA
                     EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDR
                     ECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIA
                     QQSLDRLLAA"
     gene            complement(2384..2920)
                     /locus_tag="RHX79_004275"
     CDS             complement(2384..2920)
                     /locus_tag="RHX79_004275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YniB family protein"
                     /protein_id="HDV2199377.1"
                     /translation="MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQE
                     GINAVMLDFTHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQ
                     DSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYIL
                     PVICIAAGYVFFSLLGFI"
     gene            3067..3735
                     /gene="hxpB"
                     /locus_tag="RHX79_004276"
     CDS             3067..3735
                     /gene="hxpB"
                     /locus_tag="RHX79_004276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HDV2199378.1"
                     /translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN
                     ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVA
                     LCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK
                     LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK
                     DLLG"
     gene            3898..4488
                     /locus_tag="RHX79_004277"
     CDS             3898..4488
                     /locus_tag="RHX79_004277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310461.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDV2199379.1"
                     /translation="MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLL
                     PDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPESWFIPADA
                     LQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
                     WMPHSLPENSAVRWSSQMINTLQIQFHRLIKHQVEY"
     gene            4621..6012
                     /gene="tcyP"
                     /locus_tag="RHX79_004278"
     CDS             4621..6012
                     /gene="tcyP"
                     /locus_tag="RHX79_004278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine/sulfocysteine:cation symporter"
                     /protein_id="HDV2199380.1"
                     /translation="MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFG
                     LALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLG
                     KISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
                     LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTA
                     IDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFA
                     VHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFA
                     ASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGG
                     ATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKA
                     ILDSEDDAELAHR"
     gene            complement(6016..>6336)
                     /locus_tag="RHX79_004279"
     CDS             complement(6016..>6336)
                     /locus_tag="RHX79_004279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416244.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199381.1"
                     /translation="ESLLKFPSIISMLNINLLFNPLNLPGMGSGVLEDIMSIPDSSLR
                     KRLGYEVLSFSLQAHSLSQECIDKLDIFFADDLFKYESVCIAAMEHLKSKATAPIQNG
                     PLPA"
BASE COUNT         1557 a         1560 c         1588 g         1631 t
ORIGIN      
        1 ttcttcactt tcggctgatt cggtgccaga ctgaaatcag cctataggag gaaatgatgg
       61 tacgtatcta tacgttgaca cttgcgccct ctctcgatag cgcaacaatt accccgcaaa
      121 tttatcccga aggaaaactg cgctgtaccg caccggtgtt cgaacccggg ggcggcggca
      181 tcaacgtcgc ccgcgccatt gcccatcttg gaggcagtgc cacagcgatc ttcccggcgg
      241 gtggcgcgac cggcgaacac ctggtttctc tgttggcgga tgaaaatgtc cccgtcgcta
      301 ctgtagaagc caaagactgg acccggcaga atttacacgt acatgtggaa gcaagcggtg
      361 agcagtatcg ttttgttatg ccaggcgcgg cattaaatga agatgagttt cgccagcttg
      421 aagagcaagt tctggaaatt gaatccgggg ccatcctggt cataagcgga agcctgccgc
      481 caggtgtgaa gctggaaaaa ttaacccaac tgatttccgc tgcgcaaaac caagggatcc
      541 gctgcatcat cgacagttct ggcgaagcgt taagtgcagc actggcgatt ggtaacatcg
      601 agttggttaa gcctaaccaa aaagaactca gtgcgctggt gaatcgcgaa ctcacccagc
      661 cagacgatgt ccgcaaagcc gcgcaggaaa tcgttaatag cggcaaggcc aaacgggttg
      721 tcgtttccct tggtccacaa ggagcgctgg gtgttgatag tgaaaactgc attcaggtgg
      781 tgccaccacc ggtgaaaagc cagagtaccg ttggcgctgg tgacagcatg gtcggcgcga
      841 tgacactgaa actggcagaa aatgcctctc ttgaagagat ggtccgtttt ggcgtagctg
      901 cggggagtgc agccacactc aatcagggaa cacgtctgtg ctcccatgac gatacgcaaa
      961 aaatttacgc ttacctttcc cgctaacaaa aacattcccc cagcattggg ggaatcacca
     1021 ccaacctgtc ggcaacgcgt ttctccgact atgctcaaaa gtcatgtgat aacaaagggg
     1081 tgaactatgg ccagtggcga tcttgtccgt tatgtcataa ccgtcatgtt gcatgaggat
     1141 acattgactg aaattaacga gttgaataat tacctgactc gcgacggttt tttgctcacc
     1201 atgacggatg atgagggaaa tatccatgag ctggggacta acacttttgg acttatcagt
     1261 acccaaagtg aagaagaaat tagagaactg gtttcggggc ttacccaaag tgcaaccggc
     1321 aaagatcctg aaatcaccat cacgacctgg gaggaatgga atagcaacag aaaataaatg
     1381 gtttttgggc aataatcagt ctgtggtgtg cgttagctcg tgtttttaca ccgcattctt
     1441 gcgctaacct tatgatctgg cagacaacat gggagagaca tcatgtggca ggcaatcagt
     1501 cgtcttttga gcgagcagtt aggtgaaggc gaaatcgaac tgcgtaatga actgcctggc
     1561 ggagaagtcc atgccgcatg gcatttgcgc tatgcaggac atgacttttt cgtcaaatgt
     1621 gatgaaaggg aactgcttcc cggttttacc gccgaagccg accaactgga gttactgtcg
     1681 cgtagtaaaa ccgtcaccgt gcctaaggtt tgggcagtag gcgctgaccg tgactacagt
     1741 tttctggtga tggattatct cccacctcgt ccgctggatg cgcatagcgc atttattctt
     1801 ggtcagcaaa ttgcgcgttt acatcaatgg agtgaccaac cacaatttgg cctcgatttt
     1861 gataactcgc tctccacaac tccacagccc aacacctggc aacgtcgctg gtcaacgttt
     1921 tttgctgaac aacggattgg ctggcagttg gaactggcag cagagaaagg gatcgctttc
     1981 ggcaatatcg acgccatcgt cgagcatatt cagcagcgtc tggcctcgca tcaaccgcag
     2041 ccttctctgt tgcacggcga tttatggtcc ggcaactgtg cgctgggtcc ggatggcccg
     2101 tacattttcg accctgcctg ctactggggt gaccgagagt gcgacctggc gatgttaccg
     2161 ctgcatactg aacagccgcc acaaatctat gacggctatc agtcagtatc cccgctacct
     2221 gccgatttcc ttgaacgtca accggtttac caactctaca cgctgttaaa tcgtgcaaga
     2281 ttatttggcg gtcagcattt ggttattgct cagcagtcat tggatagatt attagcagca
     2341 tgatatgggt tgaggataat ggccgctccg tgcggccttt tgattaaata aacccaagca
     2401 gagaaaagaa cacataacct gcagcaatac aaataaccgg caggatatat agtgagaaaa
     2461 actgcaggaa aatagtatgg tgcggaacaa caatacggga ctcaatttgt tcacgcgtta
     2521 gcccctcttc ccctttggct ttttccagaa tgagttgatc ttcaacacct tcccgcaaga
     2581 agcgcgcctg gcgactcatc cgggcaccgg aatcctgcaa cgccagtccg acaaaaatca
     2641 ggatgaaaat cacccagaac ataacgttca cgccaccatt aaaattgggc gtcggggagt
     2701 tataccagaa cagattcaaa aaaggcgtat tcgcctgcat catatcgatc atgacatgag
     2761 taaagtcgag catgaccgca ttaatgcctt cctggttttc ctgccgggta ttcataaatt
     2821 tcagcaaaga aatcaatgta gagatcaatg caggtataaa aatcacccaa cccaaaatcc
     2881 ttttcaaaac agcaatgcgt ccagcttgtt gatacgtcat gagttctcct tgattaagac
     2941 gcgtcgtttc acttagttta cctgtagata tctgttttcg cccattcttt aaaggcgata
     3001 tgataggcgc ttaatcataa gcacggctta ataccttaca cataatgctc taaaggagag
     3061 gttgttatgt caaccccgcg tcagattctt gctgcaattt ttgatatgga tggattactt
     3121 atcgactcag aacctttatg ggatcgagcc gaactggatg tgatggcaag cctgggggtg
     3181 gatatctccc gtcgtaacga gctgccggac accttaggtt tacgcatcga tatggtggtc
     3241 gatctttggt acgcccggca accgtggaat gggccaagcc gtcaggaagt agtagaacgg
     3301 gttattgccc gtgccatttc actggttgaa gagacacgtc cattattacc aggcgtgcgc
     3361 gaagccgttg cgttatgcaa agaacaaggt ttattggtgg gactggcctc cgcgtcacca
     3421 ctacatatgc tggaaaaagt gttgaccatg tttgacttac gcgacagttt cgatgccctc
     3481 gcctcggctg aaaaactgcc ttacagcaag ccgcatccgc aagtatatct cgactgcgca
     3541 gcaaaactgg gcgttgaccc actgacctgc gtagcgctgg aagattcagt aaatggcatg
     3601 atcgcctcta aagcagcccg catgcgttcc attgtcgttc ctgcgccaga agcgcaaaat
     3661 gatccacgtt ttgtattagc aaacgtcaaa ctctcatcgc tgacagaact caccgcaaaa
     3721 gaccttctcg gttaatgacc aggggcagtg atctcgctgc ccctggttct ttatctgaat
     3781 ttgcattcaa ctgacggatt aatcgtcaat ttaagagaaa gagttacacc gtcaccactt
     3841 ccgtgcactg tataaaaatc ctatactgta cgtatcgaca gtttagtgag ttttatcatg
     3901 acggcggaag gtcaccttct cttttctatt gcttgtgcgg tatttgccaa aaatgccgag
     3961 ctgacgcccg tgctggcaca gggtgactgg tggcatattg tcccttccgc aatcctgacg
     4021 tgtttgttac cggacatcga tcacccaaag tcgtttcttg ggcagcgatt aaagtggata
     4081 tcaaaaccga tcgcccgcgc ttttgggcat cgtggtttta cccacagtct gctggcggta
     4141 tttgcgctgc tggcaacctt ttaccttaag gttcctgaaa gctggttcat tccggctgat
     4201 gcgctacaag gaatggtgct gggttattta agccacatac ttgccgatat gctgacaccc
     4261 gccggtgttc ccctgctctg gccatgtcgc tggcgtttcc gcttgcctat cctggttccc
     4321 caaaagggca accaactgga acgttttatc tgcatggcat tatttgtctg gtcggtatgg
     4381 atgccccatt cattacccga aaacagcgcg gttcgttggt catcgcaaat gatcaatacc
     4441 ttgcagatcc agtttcatcg gcttattaag catcaggttg aatactaaaa aggcaaaaat
     4501 cacctttctg gaataagcaa ttccatttga atataagagc cagctcacag ttctgttaat
     4561 cttgcgccaa cactatgact gctacgcagt gatagaaata ataagatcag gagaacgggg
     4621 atgaactttc cattaattgc gaacatcgtg gtgttcgttg tactgctgtt tgcgctggct
     4681 cagacccgcc acaaacagtg gagtctggcg aaaaaagtgc tggtgggtct ggtgatgggt
     4741 gtggtttttg gccttgccct gcataccatt tatggttctg acagccaggt acttaaagat
     4801 tctgtacagt ggtttaacat cgttggtaac ggctatgttc aactgctgca aatgatcgtt
     4861 atgccgttag tcttcgcctc tattctgagc gcggttgccc gtctgcataa cgcatctcag
     4921 ttaggcaaaa tcagttttct gaccatcggt acgcttttgt ttaccacact gattgcggcg
     4981 ctggtcggtg tgctggtcac caacctgttt ggtttgacgg ctgaaggtct ggttcagggt
     5041 ggtgcagaaa ctgcacgtct gaacgccatc gaaagtaact atgttggtaa agtctctgac
     5101 ctgagcgttc cgcagctggt cttgtccttt atcccgaaaa acccgtttgc cgatctgacc
     5161 ggagccaatc cgacgtcaat tatcagcgtg gtaatttttg ccgcattcct cggtgtagct
     5221 gcgctgaaac tgctgaagga tgatgcgccg aaaggtgaac gcgtcttaac cgctatcgat
     5281 accctgcaaa gctgggtgat gaaactggtt cgcctggtca tgcagttgac cccttacggc
     5341 gttctggcac taatgaccaa agtggttgca ggttctaacc tgcaagacat catcaaactg
     5401 ggaagtttcg ttgtcgcgtc ctacctcggt ctgctgatta tgtttgcagt gcatggcatt
     5461 ctgctgggca ttaatggcgt gagtccgctg aagtacttcc gtaaggtatg gcctgtgctg
     5521 acgtttgcct ttaccagccg ttccagtgct gcgtctatcc cactgaatgt ggaagcacaa
     5581 acgcgtcgtc tgggcgttcc tgaatccatc gccagtttcg ccgcctcttt cggtgcgacc
     5641 attggtcaga acggctgcgc cggtttgtat ccggcaatgc tggcggtgat ggttgcgcct
     5701 acggttggca ttaacccgct ggacccgatg tggattgcga cgctggtcgg tattgttacc
     5761 gttagttccg caggcgttgc cggtgtcggt ggtggtgcaa ctttcgccgc actgattgtg
     5821 ctgcctgcga tgggcctgcc agtaaccctg gtggcgctgt taatctccgt tgaaccgctt
     5881 atcgacatgg gccgtacggc gctaaacgtt agtggctcga tgacagctgg cacgctgacc
     5941 agccagtggc tgaagcaaac cgataaagcc attctggata gcgaagacga cgccgaactg
     6001 gcacaccgtt aattcttatg ctggcaacgg tccgttttgt ataggggccg ttgctttact
     6061 ttttaaatgt tccatcgcgg cgatgcatac tgactcatat ttaaacagat cgtcagcgaa
     6121 aaaaatgtcc aacttatcaa tacattcctg gctcaatgaa tgtgcctgta gtgagaagct
     6181 taaaacctca tacccgagac gttttctaag tgaactatct ggaatactca taatatcttc
     6241 aagcacacca cttcccattc ccggaagatt tagtggatta aaaagaagat tgatattaag
     6301 cattgatatt atcgaaggaa actttaggag actctc
//
LOCUS       DAPGWB010000214         6243 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.216, whole genome shotgun sequence.
ACCESSION   DAPGWB010000214 DAPGWB010000000
VERSION     DAPGWB010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6243
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.216"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(39..1175)
                     /locus_tag="RHX79_004280"
     CDS             complement(39..1175)
                     /locus_tag="RHX79_004280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDV2199382.1"
                     /translation="MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLI
                     LLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQAR
                     VDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFS
                     ERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLE
                     QTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGD
                     DAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPND
                     DIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH"
     gene            complement(1178..1540)
                     /locus_tag="RHX79_004281"
     CDS             complement(1178..1540)
                     /locus_tag="RHX79_004281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3302 domain-containing protein"
                     /protein_id="HDV2199383.1"
                     /translation="MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAI
                     HTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSHVASQEKATDPEIASLSDRISRL
                     EHQLAAEKKTDYSTFPEI"
     gene            2077..3990
                     /gene="mtlA"
                     /locus_tag="RHX79_004282"
     CDS             2077..3990
                     /gene="mtlA"
                     /locus_tag="RHX79_004282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HDV2199384.1"
                     /translation="MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLP
                     NETLAKLVGPMITYLLPLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMI
                     AGPLGGWCIKHFDRWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPIVEALSKM
                     LAAGVNFMVVHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIE
                     ANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILG
                     GMTGVFTLTILGGGLVSPASPGSILAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILL
                     KTSKVKEEDDIEAATRRMQDMKAESKGASPLSAGDVTNDLSHVRKIIVACDAGMGSSA
                     MGAGVLRKKIQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLT
                     NFLDSGLYTSLTERLVAAQRHTANEEKVKDSLKDSFDDSSANLFKLGAENIFLGRKAA
                     TKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKT
                     GVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTT
                     SVDEVLELLAGRK"
     gene            4220..5368
                     /gene="mtlD"
                     /locus_tag="RHX79_004283"
     CDS             4220..5368
                     /gene="mtlD"
                     /locus_tag="RHX79_004283"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709374.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDV2199385.1"
                     /translation="MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARH
                     SYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKG
                     LVKRKEQGNESPLNIIACENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRI
                     VPPSASATNDPLEVTVETFSEWIVDKTQFKGALPNIPGMELTDNLMAFVERKLFTLNT
                     GHAITAYLGKLAGHQTIRDAILDEKIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQK
                     ILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYSLPHKNLIQGIAGAMHF
                     RSEDDPQAQELAALIADKGPQAALAQISGLDANSEVVSEAVTAYKAMQ"
     gene            5368..5955
                     /gene="mtlR"
                     /locus_tag="RHX79_004284"
     CDS             5368..5955
                     /gene="mtlR"
                     /locus_tag="RHX79_004284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol operon repressor MtlR"
                     /protein_id="HDV2199386.1"
                     /translation="MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRS
                     FLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVI
                     NRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSL
                     YAMQIQRYQQAVRSTMVLSLTELISRISLKKAFQK"
     gene            complement(5967..6176)
                     /locus_tag="RHX79_004285"
     CDS             complement(5967..6176)
                     /locus_tag="RHX79_004285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199387.1"
                     /translation="MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPD
                     ESVPLYLQRLEYYRRLYRPKQVEGQ"
BASE COUNT         1515 a         1605 c         1632 g         1491 t
ORIGIN      
        1 ttacaaggag caaagttcca taatctcccc cctccccctc aatgatccaa ataaagataa
       61 tgcatccagc tggtcattct tagcagcact ttccgcatca ccgaaacatg gctgaaatgg
      121 tcggagtaaa ccgccacctg ggcgtagatg ccgtcgggta aggcatcgat atcatcgtta
      181 gggtccagtt caatggttcc cagcacaccg tccgtgccgg gcacgaccgt taatgattgc
      241 aataccccct gcgcctgata agaaccgcct ggcacgacag gtaaaatact agtcagtttg
      301 ccgtgaaaca cctgcccagg tagcgcgtta aacaccactt ccgcatcatc gccgggtttc
      361 agacgtaaca gcgagttttg ccgaaattgg gcgacaattt gccgtttttg ctcggggatg
      421 aagaccatca ccggacgcag cggcaaggca gctgcgtatg tacctgggcg gatcagtacc
      481 tgagtaacgt agccattgct cggcgcgcga atgacagtct gctcaaggtt atattttgct
      541 tcagtaagtt gcgctcttaa gctcacaatc tgcgattgct cgccgttaac catactgtcg
      601 agctggctct ggatctgcgc ctgctccgcc accgagcctt tcaccagcgc atcctgcgcg
      661 aggaaatttt gccgcgcatc gtcgatgtca cgttccgaga acggattcac cgccgcctgg
      721 ctgcctttca agtaacgttg ataattttta aacagacggt cgcgctccgc tgaaacctgg
      781 gtggtgttgg cctgcgcttc agtgagctgc gcacgcagcg tctttatatt atgcgtcgcc
      841 gtcatcaggt cagcctgaag tctgtcaact cgcgcctggt aacgaaccgg gtcgagctta
      901 aaaagcacct cgcccttttg aataagctga ttattcttgt cagtgacttc agtaacaatt
      961 cccgtcacct gtggcgtgat agggatcgct atcactgcct tttgcgcggt aaaagtgtaa
     1021 gggtggttgt agttcatcaa caaaattaaa ccactcacca gaaacacgcc tcccagcgcc
     1081 gccgtcgcca gcgtccactg atttaccgga atgcggaaga ttttaaagac cgcccacgcc
     1141 agcgccacgt aagttaaaac aatcaataga tccataatta gatctccggg aacgtggaat
     1201 agtcagtctt tttctcggcg gcgagttgat gctccagccg ggaaattcgg tcagaaagtg
     1261 aggcgatttc cgggtcagtc gctttctcct gcgacgcaac atgtgactgc ataccccagc
     1321 cacgctccgg ttgatagagc gtcgcccaga tccacagaaa cggccagata acatgcagag
     1381 taaacaggct cacccagccc gccgtatgaa tagcgtcggc atgggggtga ttgcgctttt
     1441 tggcaatcag ataagggatg tcatgtatcg cgatgattcc ataaaaaatc accagaaaga
     1501 cgaagatcag cactcccaac gcgaaatagt ttagaaacat atctgcctcg gattcacgtt
     1561 tatcagtgtt gtttttgggc tggcagccag aagggagtca ggctgatatt ttgacaataa
     1621 tccgggttcg cgattctcgc cataacacca aagaataatt tttagaggtg atgagttgct
     1681 tagttacata acgattgtat gacgaaggca taacatgctg tagatcacat caggtgaacg
     1741 ccgtaagaaa atatcttgtg attcagatca caaagattca acaaaccatc aaaacaaaaa
     1801 tgtgacacta ctcacattta aatgccattt ttagcgaaaa tcgccgtctt gttgcttttt
     1861 tacacaagcg ttttgtgatg agtatcacgt caattacctc tctaccccct atatttatgt
     1921 gactgatatc acacaaaagg ccgtcgactg gacagttaac cgattcagtg ccagatttcg
     1981 cagtatctac aaggtccggc tacctctgcc gccacattaa caaaaaacct cgggcttcca
     2041 gcctgcgcga cagcaaacat aagaaggggt gtttttatgt catccgatat taagatcaaa
     2101 gtgcaaagct ttggtcgttt cctcagcaac atggtgatgc caaatatcgg cgcgtttatc
     2161 gcgtggggta tcatcaccgc gttatttatt ccaacagggt ggttaccgaa cgagacgctg
     2221 gcgaagctgg tcgggccgat gatcacttat ctcctgccgc tgctgatcgg ttataccggt
     2281 ggtaagctgg taggcggcga acgtggcggc gtagtcggtg ccatcactac catgggcgtt
     2341 atcgtcggcg cagacatgcc gatgttcctc ggttctatga ttgcaggtcc gctgggcggc
     2401 tggtgcatta agcacttcga ccgctgggta gacggtaaga tcaaatccgg ttttgagatg
     2461 ctggtgaata acttctccgc aggcatcatc gggatgatcc tcgccattct ggcatttctc
     2521 ggcattggcc cgattgttga agccctgtcc aaaatgctgg ctgcgggcgt taacttcatg
     2581 gttgtccatg acatgctgcc gctggcgtct atctttgttg aaccggcgaa aatcctgttc
     2641 ctcaacaacg ccattaacca cggtatcttc tcgccgctgg gtattcagca gtcccatgaa
     2701 ctgggtaaat ccatcttctt cctgattgaa gctaacccag gtccaggtat gggcgtgctg
     2761 ctggcgtaca tgttctttgg tcgtggtagt gctaaacagt ctgcgggcgg tgcggcaatc
     2821 atccacttcc tgggtggtat ccacgaaatc tacttcccgt atgtgctgat gaatccgcgt
     2881 ctgatcctgg ccgttatcct cggcggtatg actggcgtgt tcacgctgac tatcctgggc
     2941 ggtggtctgg tttctccagc atctccgggg tctatccttg cggtactggc gatgacgcca
     3001 aaaggtgctt acttcgctaa catcgcgggt gtgtgtgcgg cgatggctgt ctccttcgtt
     3061 gtctctgcta ttttgctgaa aaccagcaaa gtgaaagaag aagatgatat tgaagcagca
     3121 actcgtcgta tgcaggacat gaaagctgag tctaaaggcg catctccgct gtctgctggc
     3181 gatgtgacta acgacctgag ccacgtacgt aaaatcatcg ttgcctgtga cgccggtatg
     3241 ggttccagtg cgatgggcgc aggcgttctg cgtaagaaaa ttcaggatgc aggtctgtcg
     3301 cagatttctg ttactaacag cgcgatcaac aacctgccgc cagatgtgga cctcgtcatc
     3361 actcaccgtg acctgaccga acgcgctatg cgccaggttc cgcaggcaca gcatatttcg
     3421 ctgaccaact tcctcgacag cggcctgtac accagcctga ccgaacgtct ggttgctgcc
     3481 caacgccaca cggcaaacga agagaaagta aaagacagcc tgaaagacag ctttgacgat
     3541 tccagtgcta acctgttcaa gctaggcgcg gagaacatct tcctcggtcg caaagcggca
     3601 accaaagaag aagcgattcg ttttgctggc gagcagctgg tgaaaggcgg ttacgttgag
     3661 ccggaatacg ttcaggcgat gctggatcgt gaaaaactga ccccgactta tctgggtgag
     3721 tctatcgcgg tgccacacgg tacggttgaa gcgaaagatc gcgtactgaa aacgggcgtg
     3781 gtgttctgcc agtacccgga aggcgtgcgc ttcggtgaag aagaagatga cattgcccgt
     3841 ctggtgattg gtattgcagc ccgtaacaac gagcacattc aggttatcac cagcctgacc
     3901 aatgcactgg atgatgagtc cgtcatcgag cgtctggcac acaccaccag cgtggatgaa
     3961 gtgctggaac tgttggcagg tcgtaagtaa tccaatccca ccctctccac atggagaagg
     4021 tggggttaat tgcctgatgc gctacgctta tcagacctac aggatgcatc acgatttgtt
     4081 gaatttgcac gttcttgtag gccggataag gcgcttacgc cgcatccggc gctgcccctc
     4141 tcctcacgga gagggtttgg gtgagggaaa agcctcaccc cagccctctc gggtaaaaac
     4201 attgatgaag gttaatacta tgaaagcatt acattttggc gcaggtaata tcggtcgtgg
     4261 ctttatcggt aaactgctgg cagacgcggg tatccaactg acgtttgccg atgtcaatca
     4321 ggtggtactt gatgccctga atgcccgtca tagctatcag gttcatgtgg ttggtgaaac
     4381 cgagcaggta gataccgttt ccggcgtcaa tgctgtcagc agcattggtg atgatgtcgt
     4441 tgatctgatt gctcaggtcg atttagtcac taccgccgtt ggcccggttg tgctggaacg
     4501 tattgctccg gctatcgcca aagggctggt gaaacgcaaa gaacaaggta atgaatcccc
     4561 gttgaacatc atcgcctgtg aaaacatggt acgcggtacc acgcagctga aaggccatgt
     4621 gatgaacgcc ctgccggaag acgccaaagc gtgggtagaa gaacacgttg gctttgtcga
     4681 ttccgccgtt gaccgcatcg taccgccttc ggcttcggca actaacgatc cgctggaagt
     4741 gacggtagaa actttcagcg aatggattgt cgataaaacg cagttcaaag gcgcactgcc
     4801 gaacatccca ggcatggagt taaccgacaa cctgatggca tttgtcgaac gtaaactctt
     4861 caccctgaac acgggtcatg ctataaccgc gtacctcgga aaactggccg gtcatcagac
     4921 cattcgtgac gctattctcg acgagaaaat ccgcgcggtg gtaaaaggtg cgatggaaga
     4981 aagtggtgcg gtactgatca agcgctacgg ctttgacgca gacaaacatg cggcgtacat
     5041 ccagaaaatc ctcggtcgtt ttgagaaccc gtatctgaaa gatgatgtag agcgcgtagg
     5101 ccgtcagccg ctgcgtaaac tgagtgctgg cgaccgtctg atcaagccat tgctcggtac
     5161 gctggaatac agccttccgc acaagaatct gattcagggg attgctggtg caatgcactt
     5221 ccgcagtgaa gatgatccgc aggctcagga actggcagca ctgatcgctg acaaaggtcc
     5281 gcaggcggcg ctggcacaga tttccggtct tgatgccaac agcgaggttg tatccgaggc
     5341 ggtaaccgct tataaagcaa tgcaataatg gtggaccagg cgcaggacac cctgcgcccg
     5401 aataacagat tgtcagatat gcaggcaaca atggaacaaa cccaggcctt tgaaaaccgt
     5461 gtgcttgagc gtctgaatgc tggcaaaacc gtgcgaagct ttctgatcac cgccgtcgag
     5521 cttttgaccg aggcggtaaa tcttctggtg cttcaggtat tccgcaaaga cgattacgcg
     5581 gtgaagtatg ctgtagaacc gttactcgac ggcgacggtc cgctgggcga tctttctgtg
     5641 cgtttaaaac tcatttacgg gttgggcgtc attaaccgcc aggaatacga agatgcggag
     5701 ctgctgatgg cattgcgtga agaactaaat cacgacggca acgagtacgc ctttaccgac
     5761 gacgagatcc ttggaccctt tggtgaactg cactgcgtgg cggcgttacc accgccgcca
     5821 cagtttgaac cagcagactc cagtttgtat gcaatgcaaa ttcagcgcta tcaacaggct
     5881 gtgcgatcaa caatggtcct ttcactgact gagctgattt ccagaatcag cttaaaaaaa
     5941 gcctttcaaa agtaagcaac gtctgcttac tgcccctcta cctgcttcgg ccgataaagc
     6001 cgacgataat actccagacg ttgtagatat aacggcacgc tttcatcggg tattccggac
     6061 ggaatcgcgt tacggggagg aagttttttc agatactccc ggaacgcctg gcttgatgcc
     6121 atgaaatcta cggctttatc gataagaagc ggaacgtttt cacctaattt gcccatgatg
     6181 atatctccgt attaccccgc gccgggaatg cgcggccgcc aattttagtt taggttcccg
     6241 gta
//
LOCUS       DAPGWB010000215         6210 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.217, whole genome shotgun sequence.
ACCESSION   DAPGWB010000215 DAPGWB010000000
VERSION     DAPGWB010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6210
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.217"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(202..1872)
                     /gene="betA"
                     /locus_tag="RHX79_004286"
     CDS             complement(202..1872)
                     /gene="betA"
                     /locus_tag="RHX79_004286"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HDV2199388.1"
                     /translation="MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFR
                     TQMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNAL
                     DLDNWAQEPGLENWSYLDCLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEA
                     MIEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRT
                     HAMTDHIIFDGKRAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAE
                     LLAEFDIPLVHELPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGG
                     TGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSP
                     SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISP
                     GTECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIM
                     PQIITGNLNATTIMIGEKIADMIRGQEALPRSTAGYFVANGMPVRAKK"
     gene            complement(1886..3358)
                     /gene="betB"
                     /locus_tag="RHX79_004287"
     CDS             complement(1886..3358)
                     /gene="betB"
                     /locus_tag="RHX79_004287"
                     /EC_number="1.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308385.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="betaine-aldehyde dehydrogenase"
                     /protein_id="HDV2199389.1"
                     /translation="MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGRE
                     DVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETS
                     TVDIVTGADVLEYYAGLIPALEGSQIPLRETLFVYTRREPLGVVAGIGAWNYPIQIAL
                     WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTE
                     HPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMM
                     ANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHR
                     DNVLRYIVKGKEEGARVLCGGDVLKGDGLDNGAWVAPTVFTDCSDEMTIVREEIFGPV
                     MSILTYESEEEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAE
                     MPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMAKFQSIF"
     gene            complement(3372..3959)
                     /gene="betI"
                     /locus_tag="RHX79_004288"
     CDS             complement(3372..3959)
                     /gene="betI"
                     /locus_tag="RHX79_004288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308386.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator BetI"
                     /protein_id="HDV2199390.1"
                     /translation="MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTG
                     IISHYFRDKNGLLEATMRDITSQLRDAVLNRLHALPQGSAEQRLQAIVGGNFDETQVS
                     SAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPREQAQEAGYGLAAL
                     IDGLWLRAALSGKPLDKPLAHSLTRHFITQHLPTD"
     gene            4088..6121
                     /gene="betT"
                     /locus_tag="RHX79_004289"
     CDS             4088..6121
                     /gene="betT"
                     /locus_tag="RHX79_004289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline BCCT transporter BetT"
                     /protein_id="HDV2199391.1"
                     /translation="MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIG
                     RTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFA
                     AGIGIDLMFFSVAEPVTQYMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMA
                     LGYFSYRYNLPLTIRSALYPIFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLN
                     YGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVL
                     FMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFV
                     GLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNSALYEIIHGGAAFAEEAMVHP
                     ERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSQLKDINSDAPGWL
                     RVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRE
                     SANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVCYPAMEEVAQELRLRG
                     AYVELKSLPPEEGQQLGHLDLLVHMGEEQNFVYQIWPQQYSVPGFTYRARSGKSTYYR
                     LETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGHSVMFPDA"
BASE COUNT         1262 a         1719 c         1728 g         1501 t
ORIGIN      
        1 gaaataaaat ctgtcgcaga taaggttgta ttaatagtct gtatcaggaa tgttcgggtt
       61 aaatatcagc aaaaagccag catcatgaat actggatatg aagcatgaga gttacctcag
      121 tgtttatata aggattcggt ccccctctct ggaacggtaa ctctcaatct gatcggttcc
      181 tgcgttagtt cacatcacga ctcatttttt cgctctcacc ggcatcccat ttgccacaaa
      241 atatcccgcc gtgctcctcg gcagcgcttc ctgtccacga atcatatccg ctattttctc
      301 gccaatcata attgtcgtgg cgttcaaatt cccggtgata atctgcggca taatcgacgc
      361 atccaccaca cgcaggcctt ctaacccgtg tacgcggcct tcgccgtcaa ccacggacat
      421 ctcgtcgtaa cccattttgc aggtaccgca cggatggaag gcggtttcgg cgtggttacg
      481 cacgaactca tcgagctgtt catccgtctg acattccgtg ccggggctga tttcgcggcc
      541 acgatactga tccagcgccg gttgatgcat gatctcccgg gtgatgcgaa ttgcgtcgcg
      601 gaactcctgc cagtcctgct cgtgtgacat gtagttaaac agaattgccg gatgctggtg
      661 cgggtcgcgg gatttaatcc gcacatgccc acggcttggc gagcgcattg agccgacgtg
      721 gcactggaaa ccgtgctcct tcaccgcatt cgagccgtta tagttaatcg ctactggcag
      781 gaaatggtac tgaatattcg gccacgcaaa ttcctctcgg ctgcgaataa atccgcctgc
      841 ttcaaagtgg ttgctggcac caacgccagt gccgccaaac agccactccg caccgatttt
      901 cggctggttc caccactgca gggcagggta gagggaaacc ggttctttgc actcatattg
      961 cagatacatc tccagatgat cctgaagatt ttcgccgacg ccgggtaatt catgcaccag
     1021 cggaatatca aactccgcca gcagttcagc gttgccgacg ccggagcgtt gcaggatctg
     1081 cggtgaggca atcgcgcctg cacataacag cacttctttg ttggccgttg cgcgggttgg
     1141 gatggtgctg tcgccttcca gccattcgac gcccaccgcg cgtttgccgt caaaaatgat
     1201 gtgatcggtc atagcgtgag tacgaatggt caggttaggg cgcgatttgg cctgatcgag
     1261 ataaccgcgc gcggtactgg cgcgacggcc ctgcggcgtg acggtgcgat ccatcgggcc
     1321 aaaaccttcc tgctgatagc cgttgagatc gtccgtgcgc gggtagcctg cctgcacgcc
     1381 cgcttcaatc atcgcttcaa acagcggatt gacgccgggt ttggaggtgg tgacgctcac
     1441 cgggccatcg ccaccgtggt agtcgttctc gcccacatcg cgagtctcgg ccttacggta
     1501 gtagggcagg cagtcgagat aactccagtt ctccagaccg ggttcttgcg cccagttatc
     1561 gagatccagc gcgttgccac ggatgtagca catgccgttg atcagcgacg atccacccag
     1621 acctttaccg cgtccgcact ccatgcggcg gttattcata aacggttcag gttccgtttc
     1681 ataggcccag ttgtagcgtt taccctgtag cgggaacgcc agcgcggcgg gcatctgggt
     1741 gcggaagtca aagcgatagt ccgggccgcc cgcttcaagc agcagcacgg aggtattcgg
     1801 atcttcagtc agacgggtag cgagaacgtt gccggctgag ccggcaccaa taatgatgta
     1861 gtcaaattgc aaataaacct cctggttaga atatggactg gaatttagcc atctcaacct
     1921 ggatggactt cacctgggtg taactctgga gcgtcatcac gccgttctcg cgaccaatgc
     1981 cggagtgttt gtagccgcca acgggcatct ctgccgggga ttcgccccag gtgttgatcc
     2041 agcaaatacc cgcttccagc tgatgaatga cgcgatgcgc gcggttcagg tccgccgtca
     2101 cgatgcccgc cgccaggccg tagtcggtat cgttagcgcg gcgaatgact tcctcttccg
     2161 actcgtaggt cagaatggac atcaccggcc cgaagatctc ttcgcgcaca atggtcattt
     2221 cgtcgctgca atcggtgaac acagtcggcg cgacccatgc gccgttatcg aggccatcgc
     2281 ctttcagtac atcgccgccg cacagtacgc gcgcgccttc ctctttgcct ttgacgatat
     2341 agcgcagcac gttatcgcga tgcgggaagc tgaccagcgg gccgaagtta gtttgcggat
     2401 cgaaaacgtc gcccgcgcga atgcgctcaa cgcgcgccag aattttctgc tcaaatgcgg
     2461 ctttgcattt cgccggaacg aagacgcggg tgccattggt acacacctga ccggagctga
     2521 agaagtttgc catcatggcg atatcggcgg cgagatcgag atccgcatca tcgaaaacga
     2581 tcagcggtga tttaccgccc agttccatgg tcacttcttt cagggaagag gccgccgagt
     2641 tagccatcac ttttttgccg ctggcgacac cgccggtaaa tgacactttg gcaatgcccg
     2701 gatgctcggt cagatattgc ccggtctccg cgcccacccc cggcaacacg ttaaatacgc
     2761 cgtccggcag gcccgcttcg ctgtaaattt cagccagctt taacgcggta agcggggtga
     2821 cttcgctcgg tttgaaaatc attgcgttgc ctgccgccag cgccggggcg gatttccaca
     2881 gggcaatctg aatcgggtag ttccatgcgc caatccccgc caccacaccc agaggttcgc
     2941 ggcgggtata aacaaataac gtctcacgca acgggatctg gctgccttcc agagccggga
     3001 tcagcccggc gtagtactcc agcacgtccg caccggtaac gatatcgacg gttgaggttt
     3061 ccgaatatgc ttttccggtg tcgagggttt caagttttgc gagttcgtca ttgcgttcac
     3121 gcagaatatc aacggcccga cgcagaatac gcgagcgttc catagcggtc atcgccgccc
     3181 agattttttg cccctgttgg gcactcttca cggcgcgatc gacatcctcg cgcccggcgg
     3241 cctgcacggt cgccagcacg ttaccgttgg ccgggttaat ggtctcgaag gtgcgaccgc
     3301 tggtggcgga ggtataacca ccatgtatat aaagctgctg ttctgccatt cgggacatca
     3361 cgtctcctcg gttaatcggt gggtaaatgc tgagtaataa agtgacgggt cagcgagtgt
     3421 gcgagaggtt tatccagcgg tttgccgctc agtgccgcgc gcagccataa tccgtcaatc
     3481 agcgcggcaa ggccgtagcc cgcttcctgt gcctgttcgc gcggcaattc gcggcgaaac
     3541 tcgctcacca gattcgacag caagcggcgg ctgctgacct gctgtaaacg atagagcatc
     3601 ggctgatgca tactgctggc ccagaacgcc agccaggctt tcatcgccgc actgctcacc
     3661 tgcgtttcat cgaagtttcc gccaacaatc gcctgtaatc gctgctctgc actgccctgc
     3721 ggaagtgcat gtaatcgatt caaaaccgcg tcacgcagct gactggtgat atcgcgcatg
     3781 gttgcttcca gcagaccatt tttgtccctg aaatagtggc tgatgatccc cgtagaaacg
     3841 cctgcacggc gggcgatctg cgcgatcgtt gcatcgtgca tgcccacttc atttattgct
     3901 tccagtgtgg cgtcgatcag ttgtctgcgc cggatcgact gcatccccaa tttgggcatt
     3961 ttcgccactc cattcatcag cgttgtttat ctattaaagc ggttattgat tggacgttca
     4021 atataaaatg tgtcttaatt gttacgaatt tgattttaaa tggtaacaat aacagtgggg
     4081 atactggatg acagaccttt cacacagcag ggaaaaggac aaaatcaatc cggtggtgtt
     4141 ttacacctcc gccggactga ttttgttgtt ttccctgaca acgatcctgt ttcgcgactt
     4201 ctcggccctg tggattggcc gcacgctgga ctgggtttct aaaaccttcg gttggtacta
     4261 tctactggcg gcaacgctct atattgtctt tgtggtctgt atcgcttgtt cgcgttttgg
     4321 ttcggtgaag ctcgggccag aacaatccaa accggaattc agcctgctga gttgggcggc
     4381 gatgctgttt gctgccggga tcggtatcga cctgatgttc ttctccgtag ccgaaccggt
     4441 aacgcagtat atgcagccgc cggaaggcgc gggacagacg attgaggccg cgcgtcaggc
     4501 gatggtctgg acgctgtttc actacggctt aaccggctgg tcgatgtatg cgctgatggg
     4561 catggcgctc ggatacttta gctatcgtta taatttgccg ctcaccatcc gctcggcgct
     4621 gtacccgatc ttcggtaaac ggattaacgg gccgataggg cactcagtgg atattgcagc
     4681 ggtgatcggc accatcttcg gtattgccac tacgctcggt atcggtgtgg tgcagcttaa
     4741 ctatggcttg agcgtactgt ttgatattcc cgattcgatg gcggcaaaag cggcactgat
     4801 cgccttgtcg gtgataatcg ccacgatctc tgtcacctcc ggtgtcgata aggggattcg
     4861 tgtgttatcg gaacttaacg ttgcgctggc gctgggattg atcctgttcg tattgtttat
     4921 gggcgacacc tcgttcctgc ttaatgcgct ggtgctgaat gttggcgact atgtgaatcg
     4981 ctttatgggc atgacgctca acagttttgc cttcgaccgt ccagttgagt ggatgaataa
     5041 ctggacgctc ttcttctggg catggtgggt ggcatggtcg ccgtttgtcg gcttgttcct
     5101 ggcgcgtatc tcgcgtgggc gtaccattcg ccagttcgtg ctgggcacgt tgattattcc
     5161 gtttaccttc acgctgttat ggctctcggt gttcggcaat agcgcgctgt atgaaatcat
     5221 ccacggcggc gcggcatttg ccgaggaagc gatggtccat ccggagcgcg gcttctacag
     5281 cctgctggcg cagtatccgg cgtttacctt tagcgcctcc gtcgccacca ttactggcct
     5341 gctgttttat gtgacctcgg cggactccgg tgcgctggtg ctggggaatt tcacctcgca
     5401 gcttaaagat atcaacagcg acgcccccgg ctggctgcgc gtcttctggt cggtggcgat
     5461 tggcctgctg acgctcggca tgctgatgac caacgggata tccgcgctgc aaaacaccac
     5521 ggtgattatg gggctgccgt tcagctttgt gatcttcttc gtgatggcgg ggttgtataa
     5581 atctctgaag gtagaagatt accgccgtga aagtgccaac cgcgataccg cgccgcgacc
     5641 gctggggctt caggatcgcc tgagctggaa aaaacgtctc tcgcgcctga tgaattatcc
     5701 gggcacgcgt tacactaaac agatgatgga gacggtctgt tacccggcaa tggaagaagt
     5761 ggcgcaggag ctgcggttgc gcggcgcgta cgtggagcta aaaagcctgc cgccggaaga
     5821 gggacaacag ttggggcatc tggatttgtt ggtgcatatg ggcgaagaac aaaactttgt
     5881 ctatcagatt tggccgcagc aatattcggt gccgggcttt acctaccgcg cacgtagcgg
     5941 taaatcgacc tactaccggc tggaaacctt cctgttagaa ggcagccagg gcaacgacct
     6001 gatggactac agcaaagagc aggtgatcac cgatattctt gaccagtacg agcggcacct
     6061 taactttatt catctccatc gtgaagcgcc gggccatagc gtgatgttcc cggacgcgtg
     6121 attgtttttg cataaaaccg cgccatgtct gcatatggcg cgggaatcat tgactcgctg
     6181 taaaaaatta tgcatatatt atatatgatt
//
LOCUS       DAPGWB010000216         6142 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.218, whole genome shotgun sequence.
ACCESSION   DAPGWB010000216 DAPGWB010000000
VERSION     DAPGWB010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 6142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6142
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.218"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            76..852
                     /gene="exuR"
                     /locus_tag="RHX79_004290"
     CDS             76..852
                     /gene="exuR"
                     /locus_tag="RHX79_004290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ExuR"
                     /protein_id="HDV2199392.1"
                     /translation="MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNV
                     SRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQ
                     LIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALA
                     AIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHL
                     ENTKIMLFNETSDDFEFNADRYLFAENPVVHLDTATSGSK"
     gene            1197..1859
                     /locus_tag="RHX79_004291"
     CDS             1197..1859
                     /locus_tag="RHX79_004291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV2199393.1"
                     /translation="MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLP
                     AAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW
                     LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMS
                     GLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGN
                     RG"
     gene            1863..2246
                     /gene="mzrA"
                     /locus_tag="RHX79_004292"
     CDS             1863..2246
                     /gene="mzrA"
                     /locus_tag="RHX79_004292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EnvZ/OmpR regulon moderator MzrA"
                     /protein_id="HDV2199394.1"
                     /translation="MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVH
                     QGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYI
                     IAQQDNNSQAMQWLTRLRDNSHRFG"
     gene            2393..2761
                     /locus_tag="RHX79_004293"
     CDS             2393..2761
                     /locus_tag="RHX79_004293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 domain-containing protein"
                     /protein_id="HDV2199395.1"
                     /translation="MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQ
                     NRIDGLNKALSEVRANCSDSQLRADHHKKIAKQKDEVAERQQDLAEAKQKGDADKIAK
                     RERKLAEAQEELKKLEARDY"
     gene            2799..3104
                     /locus_tag="RHX79_004294"
     CDS             2799..3104
                     /locus_tag="RHX79_004294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HDV2199396.1"
                     /translation="MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAE
                     QALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR"
     gene            3107..3511
                     /locus_tag="RHX79_004295"
     CDS             3107..3511
                     /locus_tag="RHX79_004295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDV2199397.1"
                     /translation="MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEK
                     ANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIW
                     TLRKSRKSTLLRHTRHELANDRQLLEEESREQ"
     gene            3501..3800
                     /locus_tag="RHX79_004296"
     CDS             3501..3800
                     /locus_tag="RHX79_004296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqjK-like family protein"
                     /protein_id="HDV2199398.1"
                     /translation="MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWN
                     MLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG"
     gene            3986..4378
                     /locus_tag="RHX79_004297"
     CDS             3986..4378
                     /locus_tag="RHX79_004297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008503138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDV2199399.1"
                     /translation="MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVP
                     GFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKN
                     LTISGGFLLLAITGPGAYSIDRLLNKKW"
     gene            4448..5434
                     /gene="yqjG"
                     /locus_tag="RHX79_004298"
     CDS             4448..5434
                     /gene="yqjG"
                     /locus_tag="RHX79_004298"
                     /EC_number="1.8.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionyl-hydroquinone reductase YqjG"
                     /protein_id="HDV2199400.1"
                     /translation="MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTG
                     TGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSF
                     PGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAF
                     DALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLA
                     RLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRD
                     IYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG"
     gene            5727..6092
                     /locus_tag="RHX79_004299"
     CDS             5727..6092
                     /locus_tag="RHX79_004299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDV2199401.1"
                     /translation="MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKML
                     GWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFN
                     CQAGTPGENRFGPDPKLEP"
BASE COUNT         1533 a         1518 c         1551 g         1540 t
ORIGIN      
        1 tatatatgac caatggcata cccatgaata aagtggtatg ataacttcgt ccgcattcca
       61 ctccgggaga cgcatatgga aatcactgaa ccacgccgtt tgtatcaaca acttgccgct
      121 gacctgaaag agcgcatcga acagggcgtc tatctggtag gtgataaact gcctgcagaa
      181 cgctttattg ccgatgaaaa gaacgtcagc cgtacggtag ttcgtgaagc catcatcatg
      241 ctggaagttg aaggctatgt cgaagtgcgt aaaggttcag gtattcatgt ggtttccaac
      301 cagccgcgcc atcagcaggc agctgacaat aatatggaat tcgccaatta cggtccgttt
      361 gagttgcttc aggctcgcca gctcatcgaa agtaatattg ccgaattcgc ggcaactcag
      421 gtaacgaaac aggacatcat gaaactgatg gccattcagg aacaggcgcg cggcgaacaa
      481 tgcttccgtg attccgagtg ggatttacag ttccacattc aggtagccct ggcgacgcag
      541 aactccgccc tggcggccat cgttgaaaaa atgtggacac aacgtagcca taacccgtac
      601 tggaaaaaac tgcacgaaca cattgattcc cgtaccgtcg ataactggtg tgatgaccac
      661 gatcaaatcc tcaaggcgct gattcgcaaa gatcctcatg ctgctaagct ggcaatgtgg
      721 cagcacctgg aaaacaccaa gatcatgtta ttcaacgaaa ccagcgacga cttcgagttc
      781 aatgccgacc gctatctgtt cgccgaaaac ccggtagtgc atctcgatac ggccaccagt
      841 ggcagtaaat gaaactcctg tccgacaggc gctgcgacgc gcctgtttgt ctcgtcggta
      901 agcgaaaagt ataaagtgtc agcctgtgta aatcctctcg ccaccctccc ctgcattcag
      961 caaaatcaga ctccacggac atgtaatttt gataacgaac aacgttgacc tttgttacaa
     1021 ttagattcaa tttgaattta tgtttttgaa tgctttctta tctcacgatt taacagggaa
     1081 tagttcaggc tgtgttgatg tatcaaaccc gcagaacata ccaaaacagc aataacattg
     1141 cggtagtgca tcttttaaaa ccagcgtggc gttaaccgat tcaccaggaa taatgaatgg
     1201 aacttttgac ccaattgctg caagccctgt gggcgcagga ttttgaaacc ctggccaatc
     1261 catcgatgat tggcatgttg tattttgtct tgtttgtaat tttgttcctt gaaaacggct
     1321 tgcttccagc ggccttttta ccgggcgaca gtttactggt attggtcggc gtgttgattg
     1381 cgaaaggcgc gatgggttac ccgcaaacga ttctgctgct gaccgttgcc gccagcctcg
     1441 gctgctgggt cagctatatt caggggcgat ggctgggcaa tacccgcacc gtacaaaact
     1501 ggctatctca tttacccgcg cattatcatc aacgcgcaca ccatcttttt cataaacacg
     1561 gtttatcggc gctgttaatt ggtcgcttta ttgcgtttgt cagaacactg ctgccgacga
     1621 ttgccgggtt atcagggctg aataacgcgc gctttcagtt tttcaactgg atgagcggtc
     1681 tgctgtgggt attgatcctg acaactctgg gttacatgct cggcaaaacg ccggtatttt
     1741 taaagtacga ggaccagctg atgtcatgcc tgatgctgct cccggtggtg ctgctggtgt
     1801 ttggcctggc aggttctctg gtcgtgttat ggaaaaagaa atatggaaat cgggggtaag
     1861 ggatgcaaat acctcgcatg tcgcttcgcc agctagcctg gtccggcact gttttacttc
     1921 tggtcggcac gctgttgctg gcctggtccg cggttcgcca gcaagagtct acgctggcga
     1981 ttcgtgccgt tcatcaaggc acaacgatgc cagacggttt ttcgatctgg catcaccttg
     2041 acgctcatgg cattcctttc aaaagtatca cccccaaaaa cgacactctg ttaattacat
     2101 ttgactccag cgaccagagc gccgccgcaa aagcggtcct cgacagaaca ttgccccatg
     2161 gctacatcat tgcgcagcag gacaataaca gtcaggctat gcagtggctg acccggttac
     2221 gggataactc tcatcgcttc ggataacttc ctgttatccg aaacatatca ctcactttgg
     2281 tgatttcacc gtaactgtct atgattaatg aggcggtggt taacactacc gcttcgttgt
     2341 ctggacaatc gttcctttgt aataggtccg aatcacaatg gaaggttcaa gaatgaaata
     2401 ccgcatcgct ttagctgttt ctctctttgc tcttagtgcc ggtagttatg ccactaccct
     2461 gtgtcaggaa aaggagcaaa atatccttaa ggagatcagc tatgccgaaa aacaccaaaa
     2521 ccagaatcgt attgacggtc tgaataaagc cctgagtgaa gtccgggcca actgttcaga
     2581 tagccagctg cgtgccgatc atcacaagaa aatcgcaaag cagaaagatg aggtggcgga
     2641 acgccagcaa gatttagccg aggcgaagca aaaaggcgat gccgataaga ttgccaaacg
     2701 cgaacggaaa ctggcagaag cgcaggaaga gctgaaaaag ctggaagcgc gcgactacta
     2761 actcacaata gtcactactt actcacctgg agaaaactat gtcgaaagaa cacactacgg
     2821 aacatctgcg tgctgagttg aaatcccttt ccgatacgct ggaagaggtg cttagctcat
     2881 ctggcgagaa gtcgaaagaa gagttgagta agattcgtag caaagcggag caggcactga
     2941 aacagagccg ttatcgcctg ggtgaaaccg gtgatgccat cgccaaacaa acccgtgtcg
     3001 cggcggcgcg tgctgatgag tatgtgcgtg aaaatccgtg gaccggcgtg ggcattggcg
     3061 ctgcaatcgg tgtagtgctc ggcgttctgc tgtcgcgtcg ttaattatgg cggacactca
     3121 tcacgcgcaa gggcccggta aaagcgttct gggcatcggg cagcgaattg tttccatcat
     3181 ggttgaaatg gtggaaacac gtctgcggct ggcggtggtg gagctggaag aggaaaaagc
     3241 taatctcttt caacttttac tgatgctggg cctgacgatg cttttcgctg catttggtct
     3301 tatgagcctg atggtgctaa ttatttgggc ggttgatccg caatatcgcc tgaatgcgat
     3361 gattgccacc accgtggtgt tgctgctact ggcactgatt ggcggtatct ggacgttacg
     3421 taaatcgcgt aaatccacct tgctgcgcca tacacgccat gagctggcaa acgatcggca
     3481 actgctcgag gaggagtccc gtgagcagta aagtcgaacg tgaacgacgt aaggcgcaac
     3541 tgcttagcca gatccagcaa caacggctgg atctttccgc cagtcgtcgt gaatggctgg
     3601 aggcaacagg cgcttacgat cgtcgctgga atatgctgct aagtctgcgc tcctgggcgc
     3661 tggttggcag tagcgtgatg gcgatctgga cgattcgcca tcctaatatg ctggtccgct
     3721 gggccagacg cggttttggc gtatggagcg cctggcgtct ggttaaaacg accctcaagc
     3781 agcaacagct tcgcggttaa cttccctctg gccggagcaa ttccggcctt atccctcaaa
     3841 ttttttgaag atttttgaca gttttccttg ctaacaatca tcattcacca cgtttatgat
     3901 tctctccatc gacagcaacg acgctaatac cgcgcccttg cacaaaaaaa caatcagcag
     3961 cctgagtggc gcagtggaga gtatgatgaa aaaattagaa gatgttggtg tactggtagc
     4021 gcgcatttta atgccgattc tgtttattac cgcaggctgg ggaaaaatta ctggctacgc
     4081 gggtacccaa caatatatgg aagcaatggg tgtcccgggt tttatgctgc cgctggtgat
     4141 tctgcttgag ttcggtggtg gtctggcaat cctgttcggt ttcctgactc gcaccacagc
     4201 cctgtttact gcgggcttta cgctgctgac ggcattttta tttcacagca actttgctga
     4261 aggcgtcaac tcgctgatgt tcatgaaaaa cctgacaatt tctggcggat tcctgctgct
     4321 ggcaattacc ggtccgggcg cgtatagcat cgaccgcctg ctgaataaaa agtggtaagc
     4381 acgcgctata cttaacgata aaaaacgagg aggaagctcc tcgtttttgc tattggagga
     4441 gagaaaaatg ggtcaactga ttgacggcgt ctggcatgac acctggtacg ataccaaatc
     4501 taccggcggt aaatttcaac gttcagcttc cgcatttcgt aactggctca ctgccgatgg
     4561 cgcacctggc cccactggca caggcggttt tatcgcagag aaagatcgtt atcatctcta
     4621 tgtttcactc gcctgcccgt gggcgcaccg cacgctgatc atgcgcaaac tcaaaggact
     4681 ggaaccgttt atttccgttt ccgtagtgaa cccgctgatg ctggaaaacg gctggacctt
     4741 tgatgacagt tttccgggag caaccggaga tacgctctat caacatgaat ttctgtatca
     4801 gctttatctc cacgccgatc cacactacag cggacgagtt actgttcccg tgctgtggga
     4861 caaaaagaac cacaccatcg tcagcaacga atcagcagaa atcatccgca tgttcaatac
     4921 cgcgtttgat gcgctgggcg caaaagcggg tgattactac ccaccagccc tgcaaacgaa
     4981 aattgacgaa cttaacggct ggatttatga caccgttaac aacggcgtgt ataaagctgg
     5041 ttttgccacc agccagcaag cctacgacga ggcggtggcg aaagtgtttg aatcgctggc
     5101 gcgactggag cagattttag gccagcatcg ttacctgacc ggcaaccagc taaccgaagc
     5161 cgatattcgc ctgtggacca cgctggtccg ttttgatcca gtgtatgtga cccacttcaa
     5221 gtgtgataag caccgcatca gcgattacct taatctgtat ggcttcctgc gcgatatcta
     5281 ccagatgccg ggaattgccg aaacagtcaa tttcgatcac atccgtaatc attacttccg
     5341 cagccataag accatcaacc ctacggggat tatttcaatt ggtccgtggc aggatctcga
     5401 tgaaccgcat ggacgagatg ttcgcttcgg ttaaaaaaag gcaccttacg aggtgcctct
     5461 gataattagc taagtgcatg ttgttcatgt cggatgcggc gtgaacgcct tatcaaacct
     5521 acaaaacatt tatattcaat atgttgcaat gaccgcgcag gccagataag cgtagcgcat
     5581 ctggcgattt tgcgcttgtc atcagtctta gcgcgccttc acagcacttt attaattcct
     5641 tgaacgaata tttactgcca tttcattcac gtctattctt aatttgctgc tttaaaaaca
     5701 agtgattgag caaaattgag gcaaaaatgg actggtatct gaaagtacta aaaaattatg
     5761 tcggtttccg gggtcgtgcg cggcgcaaag agtactggat gtttattctg gtcaacatca
     5821 tctttacgtt cgtgctgggg ctgctggata aaatgttagg ctggcaacgc gctggtggcg
     5881 aaggcatcct gacgacaatc tacggtattc tggtgttttt accgtggtgg gcagttcagt
     5941 tccgccgcct gcacgacacc gaccgctcgg cgtggtgggc actgttgttc ttaatcccgt
     6001 ttatcggctg gcttattatc atcgtcttta actgccaggc gggtacgcca ggcgaaaacc
     6061 gctttggacc agatccgaaa ctggaacctt aaaacaaatc tgctcgccgg atgtctgact
     6121 catccggctt ttatcatcat gt
//
LOCUS       DAPGWB010000217         5997 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.219, whole genome shotgun sequence.
ACCESSION   DAPGWB010000217 DAPGWB010000000
VERSION     DAPGWB010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5997
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.219"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..679)
                     /locus_tag="RHX79_004300"
     CDS             complement(<1..679)
                     /locus_tag="RHX79_004300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDV2199402.1"
                     /translation="MSKISGWNFSQNITSADNCKQKNEDLDTWYVGMNDFARIAGGQN
                     SRSNILSPRAFLEFLAKIFTLGYVDFSKRSNEAGRNMMAHIKSSSYIKNNDGSEIMKF
                     VMNNPEGERADLSKVEIEITLASAFNNGIREGHTVIIFTQPDGSTNRYEGKSFERKDE
                     SSLHLITNKILACYQREANKEIARLLNIPQELNNSQDLNNSQVSCKDSVDSTITDLLE
                     KPLNNALL"
     gene            complement(802..1254)
                     /gene="tabA"
                     /locus_tag="RHX79_004301"
     CDS             complement(802..1254)
                     /gene="tabA"
                     /locus_tag="RHX79_004301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin biofilm protein TabA"
                     /protein_id="HDV2199403.1"
                     /translation="MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRL
                     FYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAF
                     LPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA"
     gene            complement(1399..1992)
                     /locus_tag="RHX79_004302"
     CDS             complement(1399..1992)
                     /locus_tag="RHX79_004302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709951.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDV2199404.1"
                     /translation="MVTKKQSRVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTD
                     YLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAAR
                     RYSQNGGCAGCMVLEGIHSHDPLARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFM
                     STVMSGLSAKAREGHSIEQLCATAALAGEAIKTLLKE"
     gene            2063..2776
                     /gene="bdcA"
                     /locus_tag="RHX79_004303"
     CDS             2063..2776
                     /gene="bdcA"
                     /locus_tag="RHX79_004303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDV2199405.1"
                     /translation="MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAA
                     KRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGEALELNADDIDRL
                     FKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGL
                     ARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAG
                     PEASFVTGAMHTIDGAFGA"
     gene            2907..3302
                     /locus_tag="RHX79_004304"
     CDS             2907..3302
                     /locus_tag="RHX79_004304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDV2199406.1"
                     /translation="MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGT
                     PEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAP
                     PYPNWTAVGVTWLAGFDFEIKVIARIPEQ"
     gene            3583..3717
                     /gene="pyrL"
                     /locus_tag="RHX79_004305"
     CDS             3583..3717
                     /gene="pyrL"
                     /locus_tag="RHX79_004305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyr operon leader peptide"
                     /protein_id="HDV2199407.1"
                     /translation="MVQCVRHFVLPRLKKDAGLPFFFPLITHSQPLNRGAFFCPGVRR
                     "
     gene            3721..4656
                     /gene="pyrB"
                     /locus_tag="RHX79_004306"
     CDS             3721..4656
                     /gene="pyrB"
                     /locus_tag="RHX79_004306"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HDV2199408.1"
                     /translation="MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKV
                     IASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDA
                     IVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAM
                     VGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEE
                     VMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIAT
                     DVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL"
     gene            4669..5130
                     /gene="pyrI"
                     /locus_tag="RHX79_004307"
     CDS             4669..5130
                     /gene="pyrI"
                     /locus_tag="RHX79_004307"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HDV2199409.1"
                     /translation="MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITI
                     GLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPER
                     IDNVLVCPNSNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN"
     gene            5203..5589
                     /gene="ridA"
                     /locus_tag="RHX79_004308"
     CDS             5203..5589
                     /gene="ridA"
                     /locus_tag="RHX79_004308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminobutanoate/2-iminopropanoate deaminase"
                     /protein_id="HDV2199410.1"
                     /translation="MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPA
                     DVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATF
                     PARSCVEVARLPKDVKIEIEAIAVRR"
     gene            5655..>5997
                     /locus_tag="RHX79_004309"
     CDS             5655..>5997
                     /locus_tag="RHX79_004309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001118333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV2199411.1"
                     /translation="MAKPRFTNEQIAEILQQSKEGASNKELCEHYQFSVSTLRRWQEQ
                     HADGIRSELKKTESKAQIVFLVFFAIAILLTLIFDKPTGGWVIPPLLIYCVYYIRQYR
                     NISGRHIKKEDI"
BASE COUNT         1599 a         1465 c         1379 g         1554 t
ORIGIN      
        1 ctaataatgc attattcaat ggtttttcta ataaatccgt aatcgtagaa tcaactgaat
       61 ctttacaact cacctgcgag ttattcaagt cctgagaatt atttaactcc tgcggaatat
      121 ttaatagacg agctatttcc ttgttagctt cgcgttggta acacgccaga atcttgttag
      181 taatcaggtg taatgaactc tcatcttttc tttcaaagga cttcccttca taacgattag
      241 tcgaaccatc aggttgtgta aatataatga ctgtatgtcc ttcacgaatc ccattattaa
      301 aagctgaggc aagtgtaatt tctatttcca ccttagataa atccgctcgc tccccttcag
      361 gattattcat aacaaacttc attatctcac taccatcatt atttttgata taagatgagg
      421 acttaatatg agccatcata tttctacccg cttcgttgga gcgtttgcta aaatccacat
      481 aacccagggt aaatatctta gccaaaaact ccaaaaatgc tctgggagaa agaatattgc
      541 ttctgctatt ctgccctccg gcaattcggg caaaatcatt cattcccaca taccaggtat
      601 ctaagtcttc atttttttgt ttacaattgt cggctgatgt aatgttttga gaaaaattcc
      661 aacctgatat tttgctcatg acggactcct tgagttaata agaacgtcta agcattacaa
      721 attttactca caaaaaaata tcaaaaaacg ctcttttcac aaactcgccg taaatctgga
      781 gttatttacg gcgaaaagtc atcacgccat cagcatcttc actactgctt tgcgaacctg
      841 ggctggtgca cccactgcgc acagcggttt atgcacttcc cccggataaa acacaacaaa
      901 atcaccttca ttaaggataa ctgttttctc atcaacgcct tccggcaaaa atgcgatgtc
      961 tttatcagct aaccagtcgg tatccggcgt gcctgcaggt tgcgtgctga aggtcatgcc
     1021 ttcctgacct tttaacacaa tctgaatgtc gagatagcgg gcatggtact ccgcacggcg
     1081 ggcttcgtac ggctcggtca tatcttccga gataagataa aacagacgat tgccttcgat
     1141 atcgtgcttg ccctttggcg tttctgccgt aacgtgtgct ttgatatgct caatcgcctg
     1201 gcgtaactcc tggggtagcc acggctgaag attatgaata tttccgatga tcatcttttc
     1261 cactccttaa ttaaaacaac gtttcatttc tatcgttata cgaaaagatg atcaattccg
     1321 ctagccttaa cgcgtgaatt attgtcttat cacaacttat cggcaggcgc gttcccgcct
     1381 ttcggatcaa ggccagcatc actccttgag aagagttttt atcgcttccc ccgccagtgc
     1441 agctgttgca cagagttgtt cgattgagtg cccctcccgt gccttcgcag aaagccctga
     1501 catcacggta ctcataaaat cagtcacaca ttgtgcgctt tgtggatgcc gcctggcgat
     1561 atagtcataa atggtcgttt ctgcggcgtg ataatattga acggcaatat cacgcgctag
     1621 tggatcatga ctatgaatac cttcaagaac catacagcca gcgcagccgc cgttttggct
     1681 atatctgcgc gccgcttctt ttaatacctc aaccaggcac tcgcctactg gacgatcatc
     1741 acgaagaata tcggcaagcg gaatagcttc cgtaccgacg tattcattga gtacacggct
     1801 aaataaccca gctttactgc caaaagccgc gtagaggctc ggggggttaa taccaagata
     1861 atcagtaact tcagcaacac tgacagcatc gaaacctttt tggtgaaaaa gcacttttgc
     1921 cgcagagatt gcctgctcag gagcgaaacg tctgggacga cctggaacgc gagattgttt
     1981 tttagtgacc attacaaaac ctgttgacag aaagttaaaa cagttttgta atgcatgtta
     2041 cataataaat caaggagtcc ttatgggcgc ttttacaggt aagacagttc tcatcctcgg
     2101 tggcagtcgt ggtatcggtg ccgctatcgt acgtcgtttc gtcaccgatg gggccaatgt
     2161 acgattcacc tatgcggggt cgaaagatgc cgctaaacgc ctggcacaag agactggagc
     2221 gacagcagta ttcacagata gtgctgacag agacgctgtc attgatgtcg ttcgtaagag
     2281 cggcgcattg gatatcctgg tggtaaatgc aggtattggc gtctttggcg aggccctgga
     2341 attaaatgcc gacgatattg atcgcctttt caaaatcaat attcatgctc cttatcatgc
     2401 ctctgttgaa gccgcccggc agatgcccga aggcgggcgc atcttaatca tcggctccgt
     2461 gaatggcgat cgtatgcctg ttgcaggcat ggctgcttat gccgccagca aatctgccct
     2521 gcaaggcatg gcgcgcgggc tggcccgtga ttttggaccg cgtgggatca ccattaacgt
     2581 cgtccagcca gggccaattg ataccgacgc taatcccgcc aacgggccaa tgcgcgatat
     2641 gttgcatagt ttgatggcta tcaaaagaca tgggcaaccg gaagaggtcg ctggtatggt
     2701 cgcatggtta gcagggccag aagccagttt tgttaccggc gcgatgcata ccattgatgg
     2761 cgcgtttggc gcataaccga ctacgctcaa ttaagcccag ccattatcca tgatgtctgg
     2821 gttttgttta ctcacgtcgt ccgctaaaag cggctcccgg taaagagaaa tcttctgttc
     2881 atgtcgtaaa tcttgaggat aaccaaatgg tagaaagaac cgctgttttc cctgctggcc
     2941 gacattcact atatgctgag catcgttatt ctgcggctat tcgttccggc gatttgctgt
     3001 ttgtttccgg gcaagtagga agtcgagagg acggaacacc agaacccgat tttcagcaac
     3061 aagtcagact ggcatttgat aatttgcatg cgaccctggc agctgcggga tgcacttttg
     3121 acgatatcat tgatgttacg agcttccata ccgatccaga aaaccaattt gaagacatca
     3181 tgacggtgaa aaatgaaata tttagcgccc caccttatcc aaactggacg gcggtgggtg
     3241 ttacatggct ggcaggcttt gattttgaaa ttaaagtgat agcgcgcatc cctgagcagt
     3301 aagcaatagt gttagccgtt cgctttcaca ctccgcccta taagtcggat gaatggaata
     3361 aaatgcatat ctgattgcgt gaaagtgaaa aagaaaaaag cagggaatgt ctgcaattat
     3421 tgataccgaa cgacagttcc cctgcagaat cacatcaaat aaaaatgcat ataccttgac
     3481 ttttaattca aataaaccgt ttgcgctgac aaaatattgc atcaaatgct tgcgccgctt
     3541 ctgacgatga gtataatgcc ggacaatttg ccgggaggat gtatggttca gtgtgttcga
     3601 cattttgtct taccgcgtct gaaaaaagac gctggcctgc cgtttttctt cccgttgatc
     3661 acccattccc agcccctcaa tcgaggggct tttttttgcc caggcgtcag gagataaaag
     3721 atggctaatc cgctatatca gaaacatatc atttccataa acgaccttag tcgcgatgac
     3781 cttaatctgg tgctggcgac agcggcgaaa ctgaaagcaa acccgcaacc agagctgttg
     3841 aagcacaaag tcattgccag ctgtttcttc gaagcctcta cccgtacccg cctctctttc
     3901 gaaacatcta tgcaccgcct gggtgccagc gtggtgggct tctccgacag cgccaataca
     3961 tcactgggta aaaagggcga aacgctggcc gataccattt cggttatcag cacttacgtc
     4021 gatgcgatag tgatgcgtca tccgcaggaa ggtgcggcgc gcctggccac cgagttttcc
     4081 ggcaatgtac cggtactgaa tgccggtgat ggctccaacc aacatccgac gcaaaccttg
     4141 ctggacttat tcactattca ggaaacccag gggcgtctgg acaatctcca cgtcgcaatg
     4201 gttggtgacc tgaaatatgg ccgcaccgtt cactccctga ctcaggcgtt agcgaagttc
     4261 gacggcaacc gtttttactt catcgcgccg gacgcgctgg caatgccgca atacattctg
     4321 gatatgctcg atgaaaaagg gatcgcatgg agtctgcaca gctctattga agaagtgatg
     4381 gcggaagtag acatcctgta catgacccgc gtgcaaaaag agcgtctgga cccgtccgag
     4441 tacgccaacg tgaaagcgca gtttgttctt cgcgccagcg atctccacaa cgccaaagcc
     4501 aatatgaaag tgctgcatcc gctgccgcgt gttgatgaga ttgcgacgga tgttgataaa
     4561 acgccacacg cctggtactt ccagcaggca ggcaacggga ttttcgctcg ccaggcgtta
     4621 ctggcactgg ttctgaatcg cgatctggta ctgtaagggg aaatagagat gacacacgat
     4681 aataaattgc aggttgaagc tattaaacgc ggcacggtaa ttgaccatat ccccgcccag
     4741 atcggtttta agctgttgag tctgttcaag ctgaccgaaa cggatcagcg catcaccatc
     4801 ggtctgaact tgccttctgg cgagatgggc cgcaaagatc tgatcaaaat cgaaaatacc
     4861 tttttgagtg aagatcaggt agatcaactg gcattgtatg cgccgcaagc cacggttaac
     4921 cgtatcgaca actatgaagt ggtgggtaaa tcgcgcccca gtctgccaga gcgcatcgac
     4981 aatgtgctgg tctgcccgaa cagcaactgt atcagccatg ccgaaccggt ttcttccagc
     5041 tttgccgtgc gaaaacgcgc caatgacatc gcgctcaaat gcaaatactg tgaaaaagag
     5101 ttttcccata atgtggtgct ggccaattaa ttgcggttgg taataaaagt ctggctccct
     5161 ataatgagcc agacttttta ccgctgtaat aaaggagaaa tcatgagcaa aactatcgcg
     5221 acggaaaatg caccggcagc tatcggtcct tacgtacagg gcgttgatct gggcaatatg
     5281 atcatcacct ccggtcaaat cccggtaaat ccgaaaacgg gcgaagtacc ggcagacgtc
     5341 gctgcacagg cacgtcagtc gctggataac gtaaaagcga tcgtcgaagc cgcaggcctg
     5401 aaagtgggcg acatcgttaa aaccaccgtg tttgtgaaag atctgaacga cttcgcaacc
     5461 gttaatgcta cctacgaagc cttcttcacc gaacacaatg ccaccttccc ggcacgttct
     5521 tgcgttgaag ttgcccgtct gccgaaagac gtgaagattg agatcgaagc gatcgctgtt
     5581 cgtcgctaat atctactgaa agataatcca ggtattgcgc ctgggttatc tgattcaacc
     5641 acggagggtt gaagatggct aaaccccgtt tcactaacga acaaattgct gaaattttac
     5701 agcagtcaaa agagggggcg tctaataagg agctatgtga acactatcaa tttagcgtta
     5761 gcacgctgcg gcgctggcaa gaacagcacg ctgacggcat cagaagcgaa ttaaaaaaaa
     5821 cagaatccaa agcacaaatc gtctttctgg ttttctttgc tatcgctatt ctactgactc
     5881 ttatatttga caaacctaca ggtggatggg taattccgcc tttattaatc tattgtgttt
     5941 attatatccg ccagtatcgc aacatctctg gcagacatat taaaaaagaa gatatct
//
LOCUS       DAPGWB010000218         5990 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.220, whole genome shotgun sequence.
ACCESSION   DAPGWB010000218 DAPGWB010000000
VERSION     DAPGWB010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5990
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.220"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            185..631
                     /locus_tag="RHX79_004310"
     CDS             185..631
                     /locus_tag="RHX79_004310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIA"
                     /protein_id="HDV2199412.1"
                     /translation="MAALTASCIDLNIQGNGAYSILKQLATMALQNGFITDSHQFLQT
                     LLLREKMHSTGFGSGIAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGV
                     PQSGEEDQVKIIGTLCRKIIHQDFIHQLRRGDADQVFALLNQTLSS"
     gene            642..2093
                     /locus_tag="RHX79_004311"
     CDS             642..2093
                     /locus_tag="RHX79_004311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIBC"
                     /protein_id="HDV2199413.1"
                     /translation="MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQG
                     SSGVENRLSSEEIAAADYVILATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSE
                     LPTNSQLFAADSGVKLGKQEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFG
                     LPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLAND
                     KALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVL
                     TYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSL
                     LEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAI
                     PYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLA
                     IGLALNISFIIVLKGLWLRRKAKAAQQELVHEH"
     gene            2083..3153
                     /locus_tag="RHX79_004312"
     CDS             2083..3153
                     /locus_tag="RHX79_004312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HDV2199414.1"
                     /translation="MNIELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGS
                     FVARKGNKGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHK
                     GFKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEAEKRGVEIGDFISPEAN
                     FACWGEDKVVGKALDNRIGCAMMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEH
                     IKPDVVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLFDKRYFPNQKLVAVLKNCAAH
                     NDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYDALLTLI
                     RDFLTTLTAEKVNAFSQFRQVD"
     gene            3153..4901
                     /locus_tag="RHX79_004313"
     CDS             3153..4901
                     /locus_tag="RHX79_004313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative frv operon regulatory protein"
                     /protein_id="HDV2199415.1"
                     /translation="MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFT
                     LNGKARIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALN
                     LPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA
                     GITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDIWPQYPGNEIKQIV
                     EQCGLFLGDNAVRTLTGLIEKQHQQAQVISADHVLGLLQRVPGIASLNIIDTQLVENI
                     TGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIG
                     LYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLHCRVIIARSLSELVAIREE
                     IEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS
                     FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWS
                     EQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASVLCQHPAEVI
                     AGLTGYEAFMELLHKG"
     gene            complement(4951..>5990)
                     /locus_tag="RHX79_004314"
     CDS             complement(4951..>5990)
                     /locus_tag="RHX79_004314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HDV2199416.1"
                     /translation="KRNLLSSAIIVAIMALGLTGCDDKKAETETPPPANSQPAAPAPE
                     APVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQSSLARYADWLKDFKQ
                     GPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTI
                     NEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEAVAESYHAAIQEINDKRQLAELK
                     NIEEREGKTFHYYSLAVMISAKQINNLISQDKFDAEAAMKKVSELETLVAQAKEADKG
                     GMNFSFINSAGQYQLEAKKYVRRVRDKVPYSDWDKEQLQDANSSWMVDDSFPRALREY
                     NEMVDDYNSLR"
BASE COUNT         1402 a         1523 c         1508 g         1557 t
ORIGIN      
        1 aaaaataatg aataactcat taatgattca tgtggtttat ttaaataacc attatgtgca
       61 ttactccgca aatctgacct ttcactctgt ctcaaattgt cattgtttac cgacatatcg
      121 cctctcatca cttaatcgct ccaccattac aattgattaa aatatatttc atggagtccg
      181 attaatggca gctcttactg caagctgtat tgacctgaat attcagggca atggcgctta
      241 ttccattctg aagcagttgg cgacaatggc gttacaaaac ggttttatca ccgactcaca
      301 ccagttcctg caaaccctgc tgctgcgcga aaaaatgcac tctactggat ttggttccgg
      361 catcgccgtg ccgcacggta aaagcgcctg cgttaaacaa ccgttcgtgt tattcgcccg
      421 caaagcgcag gctattgact ggaaagccag cgatggcgaa gacgtcaatt gctggatctg
      481 cctcggcgtg ccgcaaagcg gcgaagagga tcaggtcaaa atcatcggta cactgtgtcg
      541 caaaattatc caccaggatt ttattcacca actgcgacga ggcgacgccg accaggtgtt
      601 tgccttgtta aatcaaaccc tcagctcata aggaagtggc gatggagtca tccttacgta
      661 ttgtcgcgat caccaactgc cccgccggga tcgctcacac ctacatggtg gcggaagccc
      721 tggaacagaa agcccgttct ctcggccata ccataaaagt ggaaactcaa gggtccagtg
      781 gcgttgaaaa ccgcttatcc agcgaagaga ttgccgctgc cgattacgtc attctcgcta
      841 ccgggcgtgg cctgagcggc gatgaccggg cgcggtttgc cgggaagaag gtttatgaga
      901 ttgccatctc ccaggcgttg aaaaatatcg accagatttt cagtgaatta ccaacaaact
      961 cgcagctttt tgccgcagat agcggcgtga agctcggcaa acaggaagta caaagcggca
     1021 gcgtaatgag ccacctgatg gcgggcgtct ctgcggcgct gccgtttgtt atcggtggcg
     1081 gtatcctggt ggcgcttgcc aacatgctgg tgcagttcgg cctgccgtat accgatatgt
     1141 cgaaaggcgc gccgtcgttt acctgggtgg ttgaatccat cggttatctc ggcttcacct
     1201 ttatgatccc catcatgggc gcttatattg cctcgtcgat tgccgataaa cccgctttcg
     1261 ctccggcgtt tctggtttgc tatctggcga atgacaaagc cctgctcggc acccagtcag
     1321 gtgcgggatt cctcggcgcg gtggtgctgg ggctggcgat tggctatttc gtcttctggt
     1381 tccgtaaagt gcgccttggc aaagcattac aaccgctgct cggttcaatg ctgatcccgt
     1441 tcgttactct gctggttttc ggcgtgctca cttactacgt tatcggaccg gtaatgtccg
     1501 acctcatggg cgggttgctg cacttcctga acaccattcc tccatcaatg aaatttgcgg
     1561 cagcgtttct ggtcggtgcg atgctggcgt tcgatatggg cggccccatc aataaaaccg
     1621 cctggttctt ctgcttctca ctgctggaaa aacacattta tgactggtac gccatcgtcg
     1681 gcgttgtcgc gctgatgccg cccgtcgcgg cgggtcttgc gacgttcatt gcgcccaaac
     1741 tgtttacccg acaggaaaaa gaggctgcca gtagtgccat tgtggtcggt gccacagtcg
     1801 caaccgaacc tgctattcct tacgctctgg cagctccgtt accgatgatt accgccaata
     1861 cgctggcggg cggtattacc ggcgtgctgg tgatcgcttt cggaatcaaa cgtctggcac
     1921 ctggtttggg tatctttgac ccgctgatcg gcctgatgtc gccggtaggt tcgttttatc
     1981 tggtgctggc gattggcctc gcgctaaaca tttcattcat tatcgtcctg aaaggattgt
     2041 ggttacgccg caaagcgaaa gccgcgcaac aggagcttgt ccatgaacat tgagttactg
     2101 caacagttgt gcgaagccag cgccgtcagc ggcgatgaac aggaagttcg cgacatcctg
     2161 ataaacacgc tggaaccttg cgttaatgaa atcacctttg atggtctggg cagctttgtt
     2221 gcccgtaagg ggaataaagg tccaaaagtt gccgttgtcg ggcatatgga tgaagtcggc
     2281 tttatggtca cccacatcga cgagagcggt tttctgcgct tcaccaccat tggcggctgg
     2341 tggaatcagt cgatgctcaa ccaccgggta accatacgca cacacaaggg atttaaaatc
     2401 cctggtgtga ttggttccgt cgcgcctcat gcgttaacgg aaaagcaaaa gcaacaaccg
     2461 ctgtcatttg atgagatgtt cattgatatt ggcgcgaaca gtcgcgaaga agcggaaaag
     2521 cgcggcgttg aaattggcga ttttattagc ccggaagcca attttgcctg ctggggcgaa
     2581 gataaagtag tcggaaaggc gctggataac cgcatcggct gcgcgatgat ggcggagcta
     2641 ctacagacag taaataaccc agaaattacg ctgtacggcg ttggcagtgt ggaagaagaa
     2701 gttgggctac gcggggcaca aacctcggcg gaacacatta aaccggatgt ggtgattgtg
     2761 ctggataccg ctgtcgcagg tgatgttccg ggcattgata acattaaata cccgctgaaa
     2821 ctgggccagg ggccggggct gatgctgttt gacaagcgct acttccccaa ccagaaactg
     2881 gtagcagtgt taaaaaactg tgccgcacat aacgatttac cgctgcaatt ttccaccatg
     2941 aaaaccggag cgacggatgg cgggcgctac aacgtgatgg gcggcgggcg tccggttgtc
     3001 gcgctgtgtc tgccaacccg ttatctgcac gctaacagcg gcatgatttc aaaagccgat
     3061 tacgatgctc tgctcacgct gatacgggat tttctgacga ccttaactgc ggagaaagtc
     3121 aacgcgttta gccagttccg tcaggtggat taatgctaaa cgaacgccag ttaaagattg
     3181 tcgatctgct ggagcaacag ccgcgcacgc ctggagagct ggcgcaacag actggcgttt
     3241 caggcaggac catcctgcgt gatattgact atctcaactt cacccttaac ggcaaagccc
     3301 gcattttcgc cagtggtagt gcgggctatc agctggaaat cttcgagcgc cgcagctttt
     3361 ttcagttgct gcaaaagcac gataacgacg atcggctgct ggcgctgtta ttactgaata
     3421 ctttcactcc ccgtgcgcaa ctcgcctcgg cgcttaattt gccagaaacg tgggtagcag
     3481 agcgtctgcc ccggttaaaa cagcgttatg aacgcacttg ttgcctggcc agccgccctg
     3541 gtttgggcca tttcattgat gagacagaag agaaacgcgt tatcttgctg gcgaacttgc
     3601 tgcgcaaaga tccgttttta attccgctgg cgggcataac acgagacaac cttcagcatt
     3661 tatccacggc ctgcgacaac caacaccgct ggccgctgat gcagggtgat tatctctcca
     3721 gcctgattct ggcgatttac gccctgcgta atcagcttac tgacatatgg ccgcaatatc
     3781 ccggtaacga gataaaacaa atcgttgaac agtgcggcct gtttctcggt gataacgctg
     3841 taagaaccct gacgggtttg atagagaaac agcatcagca agcgcaggta atttcagccg
     3901 atcatgtgct ggggttgctg caaagggtgc caggcatcgc gtcattgaat attattgata
     3961 cgcagttggt tgagaatatt accgggcatt tattacgttg ccttgccgca ccggtgtgga
     4021 ttgctgagca ccgccaaagc agcatgaata acctgaaagc cgcctggcct gcggcctttg
     4081 atatgagtct gcactttatt acgctactgc gtgaacagct cgatattccc cttttcgaca
     4141 gcgatctgat cggtttgtat tttgcctgtg cgctggaacg gcatcaaaac gaacgccagc
     4201 cgatcatttt gctctcggac cagaacgcga ttgccactat taatcagctc gccattgagc
     4261 gcgatgtttt acattgtcgg gtgattattg cccgtagctt aagcgaactt gttgccattc
     4321 gcgaagagat tgagccgtta ttgatcatta acaacagcca ttatttactg gatgacgcgg
     4381 taaataatta catcaccgta aaaaatatca ttacggctgc cggtatcgaa caaataaaac
     4441 attttctggc gacggcattt attcgccaac agccggagcg ttttttctct gcccccggaa
     4501 gttttcatta ttcgaatgta cgcggtgaaa gctggcaaca tattacccgg caaatttgtg
     4561 cgcaattagt ggcacaacac catattaccg ccgatgaagc acaacgcatc atcgcccgcg
     4621 aaggcgaagg tgaaaacctg attgttaatc gcctcgccat cccacattgc tggagcgaac
     4681 aggagcgacg ttttcgtgga ttttttatta ccctcgccca accagttgag gtgaataacg
     4741 aagtcattaa ccatgtcttg atcgcctgcg ccgccgccga tgcgcgtcat gagctaaaaa
     4801 tatttagcta tctggcaagc gtattgtgtc agcatccggc agaggttatt gccgggttaa
     4861 caggatatga ggcatttatg gagttacttc acaaggggtg aactgtgtcg gatgcgccgc
     4921 atccgacact gcatttatca tcaaaaacgt ttaacgcagg ctattatagt catcaaccat
     4981 ttcgttgtac tcgcgtaatg ctctcgggaa agagtcgtcg accatccagc ttgagtttgc
     5041 gtcctgcagt tgctctttat cccagtcaga gtacgggact ttatctctga cgcggcgaac
     5101 gtatttttta gcctcgagtt gatactggcc tgccgaatta ataaacgaga aattcatgcc
     5161 gcctttatcc gcttctttgg cctgcgccac cagcgtttcc agttcagaca ctttcttcat
     5221 tgccgcttct gcatcaaact tatcttgcga tatcaggtta ttaatttgtt tcgctgaaat
     5281 catgactgcc agagagtaat agtggaatgt tttcccttct ctttcttcaa tatttttcag
     5341 ttccgcaagc tggcgcttat cgttaatttc ctgaatcgcc gcatgataag attctgctac
     5401 agcttcaaag gcttccagat tttttaagaa tgtctggtgc agcgttttcc ctttcgcaaa
     5461 cgcatcgtct ttataatttt cctgggtgta atatttatcc atttcgttaa tggtattacc
     5521 caacgccacg gcagcatcga tataactcac cgccacgcca tcaataggtt gcagcgcagg
     5581 cgttaacgcc acagcacttt ttacgccttt ttcacactca gcgaggttgg attcactaat
     5641 gccgtagatg ccataaacag tacgctcttc accggtaggc ccctgtttaa aatctttcag
     5701 ccagtcagca taacgcgcca gactgctctg tacagggatc tgtaacttgt tatagcactt
     5761 gatatagaca tccatttttt cgtcgaaaac cgcttgttca tcgaccaccg gttgcgcagg
     5821 tgtttcaggt ttagcttctg cttttgcaac gggagcttca ggagctggtg cggcaggttg
     5881 actattggca ggcgggggcg tttctgtttc ggctttttta tcatcacaac ccgtcagacc
     5941 gagggccatg atggcgacta taatagcgga agataataaa ttccttttca
//
LOCUS       DAPGWB010000219         5965 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.221, whole genome shotgun sequence.
ACCESSION   DAPGWB010000219 DAPGWB010000000
VERSION     DAPGWB010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5965
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.221"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..521
                     /locus_tag="RHX79_004315"
                     /pseudo
     CDS             1..521
                     /locus_tag="RHX79_004315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611483.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            803..1879
                     /locus_tag="RHX79_004316"
                     /pseudo
     CDS             803..1879
                     /locus_tag="RHX79_004316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907654.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            1896..2204
                     /locus_tag="RHX79_004317"
                     /pseudo
     CDS             1896..2204
                     /locus_tag="RHX79_004317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611553.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
     gene            2753..3004
                     /locus_tag="RHX79_004318"
     CDS             2753..3004
                     /locus_tag="RHX79_004318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000859018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HDV2199417.1"
                     /translation="MKTTNSILRVIASVIAAGQNQISITELVSLSGISRQSVKRAIQI
                     LEQTGQITVTRTTTNGKRGANTYYLPDQDLGGGCRSTLS"
     gene            complement(3400..3725)
                     /locus_tag="RHX79_004319"
                     /pseudo
     CDS             complement(3400..3725)
                     /locus_tag="RHX79_004319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612074.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            3829..4227
                     /locus_tag="RHX79_004320"
     CDS             3829..4227
                     /locus_tag="RHX79_004320"
                     /inference="COORDINATES: protein motif:HMM:NF025063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV2199418.1"
                     /translation="MRSYTLLAKMYALGVLSSYSRPRVSNDNPYSESLFRTLKYCPWW
                     PENGFRTIDDARVWVNRFVNWYNFEHKHSGIKYVTPAERHQGNDMKILAARKAVYQLA
                     REQHPERWRKHLRNWDYISEVYLNPEKEAA"
     gene            complement(4717..5664)
                     /locus_tag="RHX79_004321"
     CDS             complement(4717..5664)
                     /locus_tag="RHX79_004321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004215186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV2199419.1"
                     /translation="MRRMTILVLFLLVVLTWGTTWLAMRIAAETIPPVFATGMRFMFA
                     APFLISIAWLRKIPILFPPGQRLFQLVICIFYFSIPFSLMIYGETYVSSGLASLIFAN
                     MPVAVLIASSLFLKEKTNSMQIMGLTIAIVALAGILLEESKTSAESHWQGIIALVSAV
                     IIHAIIYTQCKKRSCTVSVVTFNALPCFLAGLILSATGWFFERPEVSTFSVYSILATL
                     YLGAFAGVFGILCYFALQQKASAFQASLVFLIFPLIAVSLESCIYGYGISTQSMLFII
                     PLVIGLFLTLFLRRVPVTNGHRDSSSQKANEIAEHAENS"
BASE COUNT         1721 a         1402 c         1387 g         1455 t
ORIGIN      
        1 cacactctgc catgtgttcg gggttcatcg cagcagctac agatactgga aaaaccgtcc
       61 tgaaaaacca gacggcagac gggctgtatt acgcagtcag gtacttgagc tacatggcat
      121 cagccacggt tcggccggag caagaagcat cgccacaatg gcaacccgga gaggctacca
      181 gatgggacgc tggcttgctg gcaggctcat gaaagagctg gggctggtca gctgtcagca
      241 gccgactcac cggtataaac gtggtggtca tgaacatgtt gctatcccta actaccttga
      301 aaggcagttc gccgtgaccg agccaaatca ggtgcggtga tgtgacctat atctggacgg
      361 gtaagcgctg ggcgtacctc gccgttgttc tcgacctgtt cgcaagaaaa ccagtgggct
      421 gggccatgtc gttctcgccg gacagcaggc tcaccatgaa agcgctggaa atggcatggg
      481 aaacccgtgg taagcccggc ggggtgatgt tccacagcga tagtaataat gccgatgtca
      541 gtctttacca ccacttagtt tgccgtttaa ccagattggt gtgattactg atgcagtgaa
      601 gaccttcccg catcctgact cacacagcga tcgacctttt gtgtcctgcc ctggacccgt
      661 cggttgccgg aagcgccttc atgcgaggca tctcctcacc gatgcgcgtg actcaagaag
      721 ggcctgacgg cttgtctcgt tactgtcctg tccgggttat ctgtctggag attcaactct
      781 gtttcctcac aggagctccg tcatggttga taaagttacc gaagctgccg ttgtgggtgg
      841 cgtggataca cataaagatt tgcacgttgc cgctgtcgta gatcagaaca ataaagtcct
      901 tgggactcag tatttctcca caacacgaca aggttaccgg cagatgctgg catggatgac
      961 ctcgtttggg acattaaaac gaattggtgt tgagtgcaca ggtacctatg gttccggttt
     1021 gcttcgttat tttcagaacg ccgggttaga agttcttgag gtgactgctc cagaccggat
     1081 ggagcgacgc aaacggggta aaagtgacac aattgatgct gaatgtgccg ctcatgcagc
     1141 attctcaggc atcaggacag ttactcccaa aacgcgtgat ggcatgattg agtccctgcg
     1201 ggtattaaaa acttgccgaa aaacagcaat atcagcccgc agagtcgctc tccagattat
     1261 ccattcaaat attatctctg ccccggatga attacgtgaa cagctcagaa atatgacgcg
     1321 catgcagctc atcaggaccc tgggttcctg gagacctgat gccagtgaat accgcaatgt
     1381 aaccaacgtt tatcgcattt cattaaagtc ccttgcccga cgctatctct agttacatga
     1441 cgaaatcgct gatctggatg tcatgattgc ggcaattgtc gacgagttgg cacctgagct
     1501 gattaaacgt aatgctatcg gatacgaaag cgcttcacag ttgctgatca ctgccggaga
     1561 caatcctcaa cggttaagat cagaatcagg atttgcggca ctgtgtggtg tcagcccggt
     1621 ccccgtttct tctggaaaaa cgaaccgtta ccgacttaat cgtggtggag atcgtgctgc
     1681 aaatagtgca cttcacatca tcgccatcgg acgcttacga actgacgcaa aaacaaagga
     1741 atatgtcgcc aggcgtgtag ccgaaggaca tacaaaaatg gaagcgatac gctgtctaaa
     1801 gcgatatatc tcccgcgaag tttacacgtt actgcgcaat caaaacaggc ggatcaacag
     1861 tatcccgata acagcttgac tcttagaagg gcgtccaggg cagtcattat acgagcaggc
     1921 agttccggca gttattgtgg cgataccaga tcagacagag tatgagctgg cgcggaaact
     1981 gctgggataa cagcccaatg gaacgcttct tcaggagtct gaagaacgaa tggatgccgg
     2041 tggtgggtta cgtaagcttc agcgaggcag ctcacgccat aacggactat atcgttggat
     2101 attacagcgc actaagaccg cacgaatata acggtgggtt acccccaaac gaatcggaaa
     2161 atcgatactg gaaaaactct aacgcggtgg ccagtttttg ttgaccactt caagtcgatt
     2221 ttcagagaga cgatgccatg ccgctggcgc ggcatatgtt ggtggctgtg tctgaaaaag
     2281 gttatatact ctgcataaaa tcagacaaca cgcagattac caggcgaata tcgatactct
     2341 gactcgttat acccatgcgt gcggcatcat aaaacctgca attgtccttt attgaatgaa
     2401 aggggggcat gtataggaaa ttgaaaaaac aagcgatact gtggtctagt taaatggcgt
     2461 gatgaataat tgagcaatct tgcagcatta ggagcgctaa tatgcagcta tttttattta
     2521 ttggcgtcaa aaattatata gggaaatttc ccccatataa taccctgaga gccgcatcac
     2581 gtctggcctg agcgacatcc ttaagatgtt aataagaatt aaactcttaa ggagaaaaag
     2641 aacgcgcgtt gctcgatatc tttttctttg aactacaatt cgatgacctt cggacgacat
     2701 ccagacagcc gcaagaaaaa acatggccta gcagagataa ggggcgctga cattgaaaac
     2761 gacaaattca atcctacgtg taatcgccag cgtcattgct gccggacaaa atcaaatctc
     2821 aatcactgaa ctggtaagcc tctccggtat tagtcgacag agtgttaagc gggcaattca
     2881 gatactggaa cagacagggc aaatcaccgt taccagaaca accaccaacg gcaagcgcgg
     2941 agccaacacc tactacctgc cagaccagga tttgggaggc ggttgccgtt caacattatc
     3001 ttaaccacgg ctgctgcctg gagtttacgg ggtctgaagc ccaaccgtac gaaaacgtac
     3061 tataagggtt tccccggcat gtcaacgcca gtttttatgt ttttgcctgc ttgacgtata
     3121 ggaatttgaa aaaccaggcg tcctcattaa aaataaaggg aaaagactgc ggtactataa
     3181 acggtcataa tgaatcgtca tcgattcggc ccctgatgaa agacgctcgt gaggttcttg
     3241 ttcgctaagc ggatatgtat atcctgtacg ttttgcagat attcctcacg gggtataacc
     3301 ctttatcatc aacgagttgc aggtcaaatg gtcatactgt tgctgcgtgc tttagctggc
     3361 tgaatacagt ctgaaatcat caccgtaatg caatgatgct cagtacagcc ttgcattttt
     3421 ggcggcgatg gccacaactg cgcgccagta tcctctgcgc tcgaccagtg aacagtccca
     3481 acgactgaat gagtcagtcc ttttctcagc accagtcagt actgaacgag ccccctgtac
     3541 cagaagcgtt cgcagatacg aatgaccggc ttttgttatc ctgccgagct tcgactttcc
     3601 gccgctgctg tattgttatg gtgtcagtcc cagcccggct gccagttgcc gtccattttt
     3661 aaaatcatgt gcgttaccga tacaggcaac cagcgcacag gcagtgtggg agcaactcct
     3721 tttagggggc agttcggata tagagaatta ttactactcc tgcgtgcagt atggaatgaa
     3781 aaatgttcat ccaacaatct ggtactccat tctgataacg gtggtcccat gcgcagttat
     3841 acgttgttgg cgaaaatgta tgcgcttgga gtgctaagtt cttattcccg gccaagagtc
     3901 agcaatgata acccttactc agaatctttg ttccggactc tcaaatattg tccctggtgg
     3961 cctgagaacg gttttcgcac tattgatgat gccagagtat gggtaaaccg ttttgtaaac
     4021 tggtacaact ttgaacataa gcacagcggg atcaaatatg tcacgccagc cgagcgtcat
     4081 caaggtaatg acatgaaaat actggcagcc agaaaagcag tataccagct ggcacgcgaa
     4141 cagcatcctg aacgttggag aaagcatcta cgtaactggg actacatatc agaagtctac
     4201 ctgaatccag aaaaagaggc tgcataacgt aattttatta caaaaggcga caactacctt
     4261 gaaaaacgcc gttactcacc gatctccttc acggtaatac acacctgatg aatatcacaa
     4321 aaattgacac tcaaatcagg gggagataga actcaacagg gcttgccgaa ataaccttgc
     4381 ctggttgtga gcttcggaac atgcctccat cccgataaca cagggctgca aaccagcaat
     4441 cagctcagga agcccaattc gtgatattct ggtgttaacc aaagccgttt accaaaaagc
     4501 cgtttaccat cctggtcaat accgtgaaca gtaagcatat ttttagctag atcgacacga
     4561 tagtagcaat agtcataacg aatccatccg gactatgctt accctcataa ttgcacaaga
     4621 gttaacctgg tgcatattca ggggaagccc cttccatccg ttaagtgtaa tggcctacat
     4681 taacaactga aaacgaaaag tcttttcttc aagttttcag gaattctccg catgttcagc
     4741 aatttcatta gctttttgtg atgaactatc tctatgtccg ttggttacag gcactcgacg
     4801 taagaacaga gtcagaaata accctataac tagcggtata ataaacagca ttgattgagt
     4861 tgaaattcca tatccatata tacagctttc aaggcttacc gcaatcaatg gaaaaataag
     4921 gaaaacaaga gaagcctgaa aggcactggc cttttgctga agggcaaagt agcacaatat
     4981 tccaaaaact ccggcaaaag caccgagata caaggtggct aatattgagt acacagagaa
     5041 ggtcgatacc tcgggtcttt cgaagaacca tcctgtcgca gaaagtatca atcctgccag
     5101 aaagcacggg agcgcattaa acgttaccac agagacagta caacttcttt tcttacattg
     5161 agtatatatt atggcatgaa tgattaccgc agaaacaaga gcaataatcc cctgccagtg
     5221 actctctgca cttgttttcg attcctcaag aaggatgccc gccagtgcaa ctattgcgat
     5281 agttaaaccc ataatttgca ttgagttcgt tttttccttc aaaaacaaag atgaagctat
     5341 caaaacagct acaggcatat tcgcaaatat aagggatgca agtccggaac tgacataggt
     5401 ttcaccataa atcattaatg agaaaggaat ggaaaaataa aaaatacaaa ttacaagctg
     5461 gaataagcgt tgtccgggtg gaaataaaat tggtattttt cttaaccatg caatactgat
     5521 taagaatggt gcagcaaaca taaacctcat cccggttgca aaaactgggg ggatagtttc
     5581 agcggctatt cgcatagcca gccatgtggt cccccaagtc agtacaacaa gcaggaataa
     5641 taccaaaatc gtcattctgc gcataagatt cctctactat agaagataaa aaaaccgccg
     5701 agacggcggt taactgcatg agattacagg tattgataat ctgagatgtc gggtgcctcc
     5761 cgaagaatat ctgattggtt acagatattc tgtggttttc ccgccaaaca attctacaaa
     5821 ccaccctcgc actgaggaac atctcttttc gttatattaa caacattgag atagtgcatc
     5881 actggcacct ccaggaaatt gcaacaccct ccagtaatgc actatcctca tattgataaa
     5941 aaaaataagc actggaactg tagtt
//
LOCUS       DAPGWB010000220         5922 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.222, whole genome shotgun sequence.
ACCESSION   DAPGWB010000220 DAPGWB010000000
VERSION     DAPGWB010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5922
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.222"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            85..1236
                     /gene="yiaY"
                     /locus_tag="RHX79_004322"
     CDS             85..1236
                     /gene="yiaY"
                     /locus_tag="RHX79_004322"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine dehydrogenase"
                     /protein_id="HDV2199420.1"
                     /translation="MASSTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDSMLTK
                     LGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHD
                     CAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIK
                     MAIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALK
                     AVTMIAENLPLAVEDGSNAKAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYNLP
                     HGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAEACINAIRELAKKV
                     DIPAGLRDLNVKEEDFAVLATNALKDACGFTNPIQATHEEIVAIYRAAM"
     gene            1401..2939
                     /gene="aldB"
                     /locus_tag="RHX79_004323"
     CDS             1401..2939
                     /gene="aldB"
                     /locus_tag="RHX79_004323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase AldB"
                     /protein_id="HDV2199421.1"
                     /translation="MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQN
                     LTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLE
                     LLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
                     LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGV
                     VNVVNGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNI
                     FFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESI
                     RSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLE
                     PTILFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYK
                     MGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKP
                     LGLF"
     gene            complement(3158..3301)
                     /locus_tag="RHX79_004324"
     CDS             complement(3158..3301)
                     /locus_tag="RHX79_004324"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199422.1"
                     /translation="MNNSSKTSTVQIKRIKPSIIYRLLLIGLGSPMVIYGLVRPLTIE
                     TRD"
     gene            3484..3807
                     /locus_tag="RHX79_004325"
     CDS             3484..3807
                     /locus_tag="RHX79_004325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3302 domain-containing protein"
                     /protein_id="HDV2199423.1"
                     /translation="MFLDYFALGVLIFVFLVIFYGIIILHDIPYLIAKKRNHPHADAI
                     HVAGWVSLFTLHVIWPFLWIWATLYRPERGWGMQNHDSSVVQLQQRIAGLEKQLADIK
                     SSSAE"
     gene            3813..4949
                     /locus_tag="RHX79_004326"
     CDS             3813..4949
                     /locus_tag="RHX79_004326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HDV2199424.1"
                     /translation="MDLLIILTYVAFAWAMFKIFKIPVNKWTIPTAALGGIFIVSGLI
                     LLMNYNHPYTFKAQKAVISIPVVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQAR
                     VDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFS
                     ERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLVLGEHSQIASLKAQLAEAKYNLE
                     QTIVRAPSDGYVTQVLIRPGTYAASLPLRPVMVFIPDQKRQIVAQFRQNSLLRLAPGD
                     DAEVVFNALPGKVFSGKLAAISPAVPGGAYQSTGTLQTLNTAPGSDGVIATIELDEHT
                     DLSALPDGIYAQVAVYSDHFIHVSVMRKVLLRMTSWVHYLYLDH"
     gene            complement(4946..5920)
                     /locus_tag="RHX79_004327"
     CDS             complement(4946..5920)
                     /locus_tag="RHX79_004327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2199425.1"
                     /translation="MTKLQLKYRELKIISVIAASENISHAATVLGIAQANVSKYLADF
                     ESKVGLKVFDRTTRQLMLTPFGTALLPYINDMLDRNEQLNNFIADYKHEKRGRVTIYA
                     PTGIITYLSKHVIDKIKDIGDITLSLKTCNLERNAFYEGVEFPDDCDVLISYAPPKDE
                     SLVASFITQYAVTAYASQRYLEKHPISRPDELEHHSCILIDSMMIDDANIWRFNVAGS
                     KEVRDYRVKGNYVCDNTQSALELARNHLGIVFAPDKSVQSDLQDGTLVPCFQPPYEWW
                     LDLVAIFRKREYQPWRVQYVLDEMLREIRHQLAQSQQLRPEQAAESED"
BASE COUNT         1462 a         1409 c         1548 g         1503 t
ORIGIN      
        1 tgataattaa taataatgat catgttttcg aatgaaaatc ctcagtaagc tgcccaccct
       61 tttttacact ttcaggagtg tgttatggca tcttcaactt tctttattcc ttctgtgaat
      121 gtcatcggcg ctgattcatt gactgatgca atgaatatga tggcagatta tggatttacc
      181 cgtaccttaa ttgtcactga cagtatgtta acgaaattag gtatggcggg cgatgtgcaa
      241 aaagcactgg aagaacgcaa tatttttagc gttatttatg atggcaccca acctaacccc
      301 accacggaaa acgtcgccgc aggtttgaaa ttacttaaag agaataattg cgatagcgtg
      361 atctccttag gcggtggttc tccacacgac tgcgcaaaag gtattgcgct ggtggcagcc
      421 aatggcggcg atattcgcga ttacgaaggt gttgaccgct ctgcaaaacc gcagctgccg
      481 atgatcgcca tcaataccac ggcgggtacg gcctctgaaa tgacccgttt ctgcatcatc
      541 actgacgaag cgcgtcatat caaaatggcg attgttgata aacatgtcac tccgctgctt
      601 tctgtcaatg actcctctct gatgattggt atgccgaagt cactgaccgc cgcaacgggt
      661 atggatgcct taacgcacgc tatcgaagcg tatgtttcta ttgccgccac gccgatcact
      721 gacgcttgtg cactgaaagc cgtgaccatg attgccgaaa acctgccgtt agccgttgaa
      781 gatggcagta atgcgaaagc gcgtgaagca atggcttatg cccagttcct cgccggtatg
      841 gcgttcaata atgcttctct gggttatgtt catgcgatgg cgcaccagct gggcggtttc
      901 tacaacctgc cacacggtgt atgtaacgcc gttttgctgc cgcatgttca ggtattcaac
      961 agcaaagtcg ccgccgcacg tctgcgtgac tgtgccgctg caatgggcgt gaacgtgaca
     1021 ggtaaaaacg atgcggaagg tgctgaagcc tgcattaacg ccatccgtga actggcgaag
     1081 aaagtggata tcccggcagg cctacgcgac ctgaacgtga aagaagaaga tttcgcggtt
     1141 ctggcgacta atgccctgaa agatgcctgt ggttttacta acccgatcca ggcaactcac
     1201 gaagaaattg tggcgattta tcgcgcagcg atgtaatcat catttccaca acggctggca
     1261 aattgtcagc cgctttttca actatctctg taacccttgc ccgtaaattc gtgatagctg
     1321 tcgtaaagct gttaccgact ggcgaagatt tcgccagtca cgtctaccct tgttatacct
     1381 cacaccgcaa ggagacgatc atgaccaata atcccccttc agcacagatt aagcccggcg
     1441 agtatggttt ccccctcaag ttaaaagccc gctatgacaa ctttattggc ggcgaatggg
     1501 tagcccctgc cgacggcgag tattaccaga atctgacgcc ggtgaccggg cagctgctgt
     1561 gcgaagtggc gtcttcgggc aaacgagaca tcgatctggc gctggatgct gcgcacaaag
     1621 tgaaagataa atgggcgcac acctcggtgc aggatcgcgc ggcgattctg tttaagattg
     1681 ccgatcgaat ggaacaaaac ctcgagctgt tagcgacagc tgaaacctgg gataacggca
     1741 aacccattcg cgaaaccagt gctgcggatg taccgctggc gattgaccat ttccgctatt
     1801 tcgcctcgtg tattcgggcg caggaaggtg ggatcagtga agttgatagc gaaaccgtgg
     1861 cctatcattt ccatgaaccg ttaggcgtgg tggggcagat tatcccgtgg aacttcccgc
     1921 tgctgatggc gagctggaaa atggctcccg cgctggcggc gggcaactgt gtggtgctga
     1981 aacccgcacg tcttaccccg ctttctgtac tgctgctaat ggaaattgtc ggtgatttac
     2041 tgccgccggg cgtggtgaac gtggtcaatg gcgcaggtgg ggaaattggc gaatatctgg
     2101 cgacctcgaa acgcatcgcc aaagtggcgt ttaccggctc aacggaagtg ggccaacaaa
     2161 ttatgcaata cgcaacgcaa aacattattc cggtgacgct ggagttgggc ggtaagtcgc
     2221 caaatatctt ctttgctgat gtgatggatg aagaagatgc ctttttcgat aaagcgctgg
     2281 aaggctttgc actgtttgcc tttaaccagg gcgaagtttg cacctgtccg agtcgtgctt
     2341 tagtgcagga atctatctac gaacgcttta tggaacgcgc catccgccgt gtcgaaagca
     2401 ttcgcagcgg taacccgctc gacagcgtga cgcaaatggg cgcgcaggtt tctcacgggc
     2461 aactggaaac catcctcaac tacattgata tcggtaaaaa agagggcgct gacgtgctca
     2521 caggcgggcg gcgcaagctg ctggaaggtg aactgaaaga cggctactac ctcgaaccga
     2581 cgattctgtt tggtcagaac aatatgcggg tgttccagga ggagattttt ggcccggtgc
     2641 tggcggtgac caccttcaaa acgatggaag aagcgctgga gctggcgaac gatacgcaat
     2701 atggcctggg cgcgggcgtc tggagccgca acggtaatct ggcctataag atggggcgcg
     2761 gcatacaggc tgggcgcgtg tggaccaact gctatcacgc ttacccggca catgctgcgt
     2821 ttggtggcta caaacaatca ggtatcggtc gcgaaaccca caagatgatg ctggagcatt
     2881 accagcaaac caagtgcctg ctggtgagct actcggataa accgttgggg ctgttctgat
     2941 ataagaagct ggtcgcattg ggtattcatt gcctgatgcg acgcttacgc gtcttatcat
     3001 gcctacggga acctgaccgt aggccggata aggcgtacac gccgcatccg gcataaacaa
     3061 agcgcacgtt gttacaattt acgttttaaa cctacgtgcg caataaccca gactacgcca
     3121 acagaagtgc gtttctgggg cgtgttttgt caggagttta atctcgcgtt tcgatggtga
     3181 gcgggcgaac caggccgtaa atcaccattg gtgatccgag gccaatcagc aataaacggt
     3241 agataattga aggtttaata cgcttaatct gtactgtgga tgttttactg gagttattca
     3301 ttagtttggc caatagttcc actatttcaa tatgataaac ctcgtcctgt tgaaaaacca
     3361 gacagcacat ttcagaaagt atataaaaaa caatatgtcg ttatataaat aaggaaattg
     3421 cactgcatca tggcatttca taatatgcgt taattgttct tttttatatt ctttgaggga
     3481 aatatgttcc tggactattt tgcactggga gtgcttattt ttgtatttct ggtgatattc
     3541 tatgggatta ttattttaca tgatattccc tacctgattg ctaaaaaacg taatcatcct
     3601 catgccgacg ccattcatgt tgctggttgg gtgagtcttt ttacgctgca tgttatctgg
     3661 ccatttttgt ggatttgggc cacgctttac cgcccggagc ggggatgggg aatgcaaaac
     3721 catgactcct ccgttgtgca actacaacag cgtattgccg ggctggagaa acagctcgcc
     3781 gacatcaaat cctcttctgc cgagtaatac ttatggattt actgattatt ttgacctatg
     3841 tggcttttgc atgggcaatg tttaagatct tcaaaattcc tgtaaataaa tggaccattc
     3901 ccacagcggc cctgggtggc atatttattg tcagtggttt aattctgtta atgaactata
     3961 accatccgta taccttcaaa gcgcaaaaag cggttatttc tattcctgtt gtcccacagg
     4021 tgacaggcgt ggtgatcgaa gtgacggata agaaaaatac gctgattaaa aaaggtgagg
     4081 tgctatttcg actggacccg acgcgttatc aggcgcgggt ggatcggctg atggcggata
     4141 tcgttaccgc agaacataaa cagcgggcgt tgggcgcaga gttagatgag atggcggcga
     4201 atactcagca ggcaaaggcc acgcgggata aattcgctaa agagtatcag cgttacgcac
     4261 gcggcagcca ggcgaaagta aacccgtttt cagaacgcga tattgatgtg gcgcggcaaa
     4321 attatctggc gcaggaagcc tccgtaaagt catcggcggc ggaacaaaaa cagatccaga
     4381 gccagctgga tagcctggtg ttgggtgaac attctcaaat cgccagcctg aaagcgcagc
     4441 tcgcggaagc aaaatataac cttgagcaga cgatagtgcg tgcgccgagc gatggttatg
     4501 tgacccaggt gctgattcgt ccgggtacct atgccgcgtc gctgccgcta cgtccggtga
     4561 tggtgtttat acccgatcag aaacgacaaa ttgtggcgca gttccgtcag aactccttgc
     4621 tgcgactggc ccctggcgac gatgcggaag tggtgtttaa tgctctgcca ggtaaggtat
     4681 tcagcggcaa gctggcagcc attagtccag ctgttcccgg cggagcttat cagtcgaccg
     4741 gcaccttaca gacgttaaac acagcgccgg gttcagatgg cgttatcgcg accattgaac
     4801 tggatgagca cactgatttg agcgctttac cagacggtat ttacgcccag gtggcggtct
     4861 actctgatca tttcatccat gtctcggtga tgcgcaaagt gctattacgc atgaccagct
     4921 gggtgcatta cctttatctc gatcattaat cttcgctttc cgccgcttgt tcaggccgca
     4981 gttgctgcga ctgagcaagc tggtggcgaa tttcacgcag catttcatcc agcacatact
     5041 ggacccgcca gggctggtat tcccgtttac ggaagatagc caccagatcc agccaccatt
     5101 catacggggg ctgaaagcag ggcaccagcg tgccgtcttg caggtcgctc tgcacacttt
     5161 tgtctggcgc aaacacaatc cccaggtgat ttcgtgccag ctccagcgca gattgcgtgt
     5221 tgtcgcaaac gtaatttccc ttcacgcgat aatcccgcac ctctttactc ccggcgacgt
     5281 tgaagcgcca gatattcgcg tcgtcgatca tcatcgagtc gatcaaaata caggagtgat
     5341 gttcgagttc gtcaggacgg ctaatgggat gtttctcaag atagcgctgg ctggcataag
     5401 cggttacggc atattgggta ataaaactgg caaccagcga ttcatctttt ggtggagcgt
     5461 agctgattaa aacatcacaa tcatcaggaa attcgacgcc ttcataaaag gcattacgct
     5521 caagattgca ggtttttagc gataaggtga tatcaccgat atctttaatt ttatcgatta
     5581 catgtttgga taaataggta attatgccgg ttggggcgta gatggtgacc cgaccacgtt
     5641 tctcatgctt ataatctgca ataaaattat taagctgctc gtttctgtcc agcatgtcgt
     5701 tgatgtacgg taacagcgcg gtaccaaaag gtgtgagcat cagctgccgg gtggttcggt
     5761 caaagacttt taaacccact tttgattcaa aatcagcaag gtatttgctg acgttggcct
     5821 gtgcgatgcc aagtacagtc gcggcatggc tgatattttc actggcagcg attaccgaga
     5881 taatttttaa ctcccggtac ttaagttgta attttgtcat cg
//
LOCUS       DAPGWB010000221         5901 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.223, whole genome shotgun sequence.
ACCESSION   DAPGWB010000221 DAPGWB010000000
VERSION     DAPGWB010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5901)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5901)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5901
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.223"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            278..4531
                     /gene="fdeC"
                     /locus_tag="RHX79_004328"
     CDS             278..4531
                     /gene="fdeC"
                     /locus_tag="RHX79_004328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000092554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intimin-like adhesin FdeC"
                     /protein_id="HDV2199426.1"
                     /translation="MSRYKTGHKQPRFRYSVLARCVAWANISVQVLFPLAVTFTPVMA
                     ARAQHAVQPRLSMGNTTVTADNNVEKNVASFAANAGTFLSSQPDSDATRNFITGMATA
                     KANQEIQEWLGKYGTARVKLNVDKDFSLKDSSLEMLYPIYDTPTNMLFTQGAIHRTDD
                     RTQSNIGFGWRHFSGNDWMAGVNTFIDHDLSRSHTRIGVGAEYWRDYLKLSANGYIRA
                     SGWKKSPDIEDYQERPANGWDIRAEGYLPAWPQLGASLMYEQYYGDEVGLFGKDKRQK
                     DPHAISAEVTYTPVPLLTLSAGHKQGKSGENDTRFGLEVNYRIGEPLEKQLDTDSIRE
                     RRMLAGSRYDLVERNNNIVLEYRKSEVIRIALPERIEGKGGQTLSLGLVVSKATHGLK
                     NVQWEAPSLLAEGGKITGQGSQWQVTLPAYRPGKDNYYAISAVAYDNKGNASKRVQTE
                     VVITGAGMSADRTALTLDGQSRIQMLANGNEQRPLVLSLRDAEGQPVTGMKDQIKTEL
                     TFKPAGNIVTRTLKATKSQAKPTLGEFTETEAGVYQSVFTTGTQSGEATITVSVDGMS
                     KTVTAELRATMMDVANSTLSANEPSGDVVADGQQAYTLTLTAVDSEGNPVTGEASRLR
                     LVPQDTNGVTVGAISEIKPGVYSATVSSTRAGNVVVRAFSEQYQLGTLQQTLKFVAGP
                     LDAAHSSITLNPDKPVVGGTVTAIWTAKDAYDNPVTSLTPEAPSLAGAAAVGSTASGW
                     TNNGDGTWTAQITLGSTAGELEVMPKLNGQDAAANAAKVTVVADALSSNQSKVSVAED
                     HVKAGESTTVTLVAKDAHGNAISGLSLSASLTGTASEGATVSSWTEKGDGSYVATLTT
                     GGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNKAPTVKTTTELTFTV
                     KDAYGNPVTGLKPDAPVFSGAASTGSERPSAGSWTEKGNGVYVSTLTLGSAAGQLSVM
                     PRVNGQNAVAQPLVLNVAGDASKAEIGDMTVKVNNQLANGQSANQITLTVVDSYGNPL
                     QGQEVTLTLPQGVTSKTGNTVTTNAAGKVDIELMSTVAGEHNISASVNGAQKTVTVKF
                     NADASTGQANLQVDTAVQKVANGKDAFTLTATVEDKNGNPVPGSLVTFNLPRGVKPLT
                     GDNVWVKANDEGKAELQVVSVTAGTYEITASAGNDQPSNAQSVTFVADKTTATISNIE
                     VIGNYALADGKAKQTYKVTVTDANNNLVKDSEVTLTASPASLNLEPNGTATTNEQGQA
                     IFTATTIVAATYTLKAQVSQTNGQVSTKTAESKFVADDKNAVLTASSDMQSLVADGKS
                     TAKLAVTLMSANNPVGGNMWVDIQTPEGVTEKDYQFLPSKNDHFVSGKIIRTFSTSKP
                     GVYTFTFNALTYGGYEMKPVTVTITAVDADTAKGEEAMK"
     gene            complement(4653..5510)
                     /locus_tag="RHX79_004329"
     CDS             complement(4653..5510)
                     /locus_tag="RHX79_004329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308364.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2199427.1"
                     /translation="MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRN
                     FMHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPRE
                     YRHRDYWDLANIFPSFLIRQQQKTECRLVNFPETPIFGNSFKYDIEVSNKSPDEEVKL
                     RRHHLARCMNNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCKQTDSEMAKEWTINRG
                     LYASFRYEGEWERYPEWSRNLYLMELPARGLARVNGSDIERFYYNEDFVEKDSNDVVC
                     EIFIPVRPV"
     gene            5813..5901
                     /locus_tag="RHX79_004330"
                     /pseudo
     CDS             5813..5901
                     /locus_tag="RHX79_004330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308365.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
BASE COUNT         1593 a         1350 c         1558 g         1400 t
ORIGIN      
        1 ctgtccgcag agtaaaaaat ataacttagg tgtctattta atgacttgca caaaaagcta
       61 aattttcacc cataaataaa aatataatcc cgcgcccaac cacctgatga gtggctacag
      121 acactggata tattaggtgg cggtgcactt tcttacataa aggtatttcc ttttctgcgg
      181 aaaaggaaat cgggaaatcc ccggtttttc tgacaagcag acgccattat ttgtgtctgc
      241 ctatgttcgt taattcgttc atcaggaaat tatctcaatg tcgcgttata aaacaggtca
      301 taaacaacca cgatttcgtt attcagttct ggcccgctgc gtggcgtggg caaatatctc
      361 tgttcaggtt ctttttccac tcgctgtcac ctttacccca gtaatggcgg cacgtgcgca
      421 gcatgcggtt cagccacggt tgagcatggg aaatactacg gtaactgctg ataataacgt
      481 ggagaaaaat gtcgcgtcgt ttgccgcaaa tgccgggaca tttttaagca gtcagccaga
      541 tagcgatgcg acacgtaact ttattaccgg aatggccaca gctaaagcta accaggaaat
      601 acaggagtgg ctcgggaaat atggtactgc gcgcgtcaaa ctgaatgtcg ataaagattt
      661 ctcgctgaag gattcttcgc tggaaatgct ttatccgatt tatgatacgc caacaaatat
      721 gttgttcact cagggagcaa tacatcgtac cgacgatcgt actcagtcaa atattggttt
      781 tggctggcgt catttttcag gaaatgactg gatggcgggg gtgaacacct ttatcgacca
      841 tgatttatcc cgtagtcata cccgcattgg tgttggtgcg gaatactggc gcgattatct
      901 gaaactgagc gccaatggtt atatccgggc ttctggctgg aaaaaatcgc cggatattga
      961 ggattatcag gaacgcccgg cgaatggttg ggatatccgc gcagagggct atttacctgc
     1021 ctggccgcag cttggcgcaa gcctgatgta tgaacagtat tatggcgatg aagtcgggct
     1081 gtttggtaaa gataagcgcc agaaagaccc gcatgctatt tctgccgagg tgacctatac
     1141 gccagtgcct cttctgacac tgagcgccgg gcataagcag ggcaagagcg gtgagaatga
     1201 cactcgcttt ggcctggaag ttaattatcg gattggcgaa cctctggaga aacaactcga
     1261 tacagacagc attcgcgagc gtcgaatgct ggcaggcagc cgctatgacc tggttgagcg
     1321 taataacaac atcgttcttg agtaccgcaa atctgaagtg atccgtattg ctctgcctga
     1381 gcgtattgaa ggtaagggcg gtcagacact ttccctgggg cttgtggtca gcaaagcaac
     1441 tcacggactg aaaaatgtgc agtgggaagc gccgtcatta ctggctgaag gtggcaaaat
     1501 taccggtcag ggtagtcagt ggcaagtaac gctcccggct tatcgtccag gtaaagacaa
     1561 ttattatgcg atttctgcgg ttgcctacga taacaaaggc aatgcctcaa aacgcgtgca
     1621 gacagaggtg gtcattaccg gagcaggtat gagcgccgat cgcacggcgt taacgcttga
     1681 cggtcagagc cgtattcaaa tgcttgctaa cggtaatgag caaagaccgc tggtgctgtc
     1741 tctgcgcgac gccgagggcc agccagtcac gggcatgaaa gatcagatca agactgaact
     1801 aactttcaaa ccggctggaa atattgtgac tcgtaccctg aaggccacta aatcacaggc
     1861 aaagccaaca ctgggtgagt tcaccgaaac tgaagccggg gtgtatcagt ctgtctttac
     1921 taccggaacg cagtcaggtg aggcaacgat tactgttagc gttgatggca tgagcaaaac
     1981 cgtcactgca gaactgcggg ccacgatgat ggatgtggca aactccaccc tgagcgctaa
     2041 cgagccgtca ggtgacgtgg ttgctgatgg tcagcaagcc tacacgttga cgttgactgc
     2101 ggtggactcc gagggtaatc cggtgacggg agaagccagc cgcctgcgac ttgttccgca
     2161 agacactaat ggtgttaccg ttggtgccat ttcggaaata aaaccagggg tttacagcgc
     2221 cacggtttct tcgacccgtg ccggaaacgt tgttgtacgt gccttcagcg agcagtatca
     2281 actgggcaca ttacaacaaa cgctgaagtt tgttgccggg ccgcttgatg cagcacattc
     2341 gtccatcacc ctgaatcctg ataaaccggt ggttgggggt acagttacgg caatctggac
     2401 ggcaaaagat gcctatgaca accctgtgac cagcctcacg ccggaagcgc cgtcattagc
     2461 gggtgccgct gctgtaggtt ctacggcatc gggctggaca aataatggtg atgggacgtg
     2521 gactgcgcaa attactctcg gctctacggc gggtgaatta gaagttatgc cgaagctaaa
     2581 tggacaggat gcggcagcaa atgcggcaaa agtaaccgtg gtggctgatg cgttatcttc
     2641 aaaccagtcg aaagtctctg tcgcagaaga tcacgtaaaa gccggcgaaa gcacaaccgt
     2701 gacgctggtg gcgaaagatg cgcatggcaa cgctatcagt ggtctttcgt tgtcggcaag
     2761 tttgacgggg accgcctctg aaggggcgac cgtttccagt tggaccgaaa aaggtgacgg
     2821 ttcctatgtt gctacgttga ctacaggcgg aaagacgggc gagcttcgtg tcatgccgct
     2881 cttcaacggc cagccagcag ccaccgaagc cgcgcagttg acggtcatcg ccggagagat
     2941 gtcatcagcg aactctacgc ttgttgcgga caataaggct ccgaccgtca aaacgacgac
     3001 ggaactcacc ttcaccgtga aggatgcgta cgggaacccg gtcaccgggc tgaagccaga
     3061 tgcaccagtg tttagcggtg ccgccagcac ggggagtgag cgtccttcag caggaagctg
     3121 gacagagaaa ggtaatgggg tctacgtgtc gaccttaacg ctgggatctg ccgcgggtca
     3181 gttgtctgtg atgccgcgag tgaacggcca aaatgccgtt gctcagccac tggtgctgaa
     3241 cgttgcaggt gacgcatcta aggctgagat tggtgatatg acagtgaagg ttaataacca
     3301 actggctaat ggacagtctg ctaaccagat aaccctgacc gtcgtggaca gctatggtaa
     3361 cccgttgcag gggcaagaag ttacgctgac tttaccgcag ggtgtgacca gcaagacggg
     3421 gaatacagta acaaccaatg cggcagggaa agtggacatt gagcttatgt caacggttgc
     3481 gggagaacac aatatttccg cttcggtgaa tggtgctcag aagacggtca cggtgaaatt
     3541 taacgcggat gccagcaccg gtcaggcaaa cctgcaggta gacaccgccg ttcaaaaagt
     3601 ggcaaacggc aaagacgcct ttacgctgac ggcgaccgtt gaggataaaa atggtaaccc
     3661 tgttccaggg agcctggtga cctttaatct gccccggggt gtcaagccgc ttacaggcga
     3721 taatgtctgg gtgaaagcca acgatgaggg gaaagcagag ttgcaggtgg tttcagtgac
     3781 tgccggaacc tatgagatca cggcgtcggc aggaaatgac cagccttcga atgcgcagtc
     3841 tgtaacgttt gtggcggata agactacggc aaccatctcc aatattgagg tgattggcaa
     3901 ctatgcgctg gcggacggca aagccaaaca aacgtataaa gttacggtga ctgatgccaa
     3961 taacaatttg gtgaaagata gcgaagtgac gctgactgcc agcccggctt cgttaaacct
     4021 ggaaccgaat ggcactgcga caacgaatga gcaagggcag gctattttca ccgctaccac
     4081 tattgttgcg gcgacataca cactcaaggc gcaagtgagt cagaccaacg gtcaggtatc
     4141 aacgaaaact gccgaatcta aattcgttgc ggatgataaa aacgcggtac tcaccgcatc
     4201 atctgatatg caatctctgg tggcggatgg gaaatcgact gcgaagctgg cggtgaccct
     4261 gatgtcggca aataaccccg ttggcgggaa tatgtgggtc gacattcaga cgccggaagg
     4321 ggtgacggag aaggattatc agttcctgcc gtcgaaaaat gaccatttcg tgagcgggaa
     4381 aatcatacgt acatttagta ccagcaagcc aggcgtctat acattcacat ttaacgccct
     4441 gacctatggc gggtacgaaa tgaagccagt gacggtgacc attaccgcgg tggatgccga
     4501 tacggcaaag ggcgaggagg cgatgaaata atttttaaga atatgaaaat agcattctaa
     4561 taaacaataa tggcgttgac atattcaacg ccattattta ttgaattgcc tgacagtagt
     4621 ctcgttataa gttcatttag atatagcgac agctaaaccg gacgaacggg gataaaaatt
     4681 tcgcaaacaa catcattgct atccttttct acgaaatctt cattgtaata aaatcgctca
     4741 atatcactgc cgttcactct ggctaacccc ctggcaggta attccatcag atagaggttt
     4801 cgcgaccatt caggatagcg ctcccactca ccttcatagc ggaaagatgc atacagtcct
     4861 cggtttattg tccactcttt cgccatctca gaatcggttt gtttacatac cgtaccggca
     4921 aaagtttcaa ctgtgagcaa atcgaccgat tttgttgacg gttcaaacgt ggagacgaaa
     4981 tagatatccg tcttaaaatt attcatacat ctggctaaat gatgacgtcg cagtttgact
     5041 tcttcatccg gtgatttatt cgacacttca atgtcatatt taaatgagtt gccaaaaata
     5101 ggtgtctcag gaaaattgac taatctacac tccgtctttt gctgttgacg tattaaaaaa
     5161 gaagggaaga tatttgcgag atcccaataa tcacggtggc ggtattcacg gggagagcag
     5221 ccgaataact ttttaaattc gcggctgaat gactgctgtg aatcaaaatg caaagagagt
     5281 gcaatatcaa gcatagattt cgcggtgagc cggacaagaa tagcggcacg gcaaagcctt
     5341 cgtttgcgaa tgtattctcc caaaggcaca tgcatgaaat ttcggaacag aagctggatg
     5401 ttgcgtctgc tgtagccaga tttctgtgcg atatcttcga ttgaaatagg gtgctcaaga
     5461 ttgcactcaa tccactccag gagctgctgt agaatcttct gcctgatcat cacattctcc
     5521 attgattctt cgtcatatcg cacattttcg ttatgccctg ggccctaagt gtatcaaaaa
     5581 cagcaagtcc gaaggcaaaa gcactggtag cgtctgcttc gttgtccccg aaaatagaga
     5641 ggtttcagtc ctacattatt aatgaatttt ttgcataagt gatatcaaaa tccacatact
     5701 aatttgaggt tacgttttaa cgtagactca ttgttcatgc ctaatggagg gactgacagt
     5761 ggaattttcc gtatagtctg cttcagagta ttgcagatgc ccatcaaaaa tcgatttctc
     5821 actgacagag agagaaatgg cacaaattag ttcgcttgat ttgggttatg ttggggagtc
     5881 ggtaaaacat tttaatcctg a
//
LOCUS       DAPGWB010000222         5807 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.224, whole genome shotgun sequence.
ACCESSION   DAPGWB010000222 DAPGWB010000000
VERSION     DAPGWB010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5807
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.224"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            49..789
                     /locus_tag="RHX79_004331"
     CDS             49..789
                     /locus_tag="RHX79_004331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MipA/OmpV family protein"
                     /protein_id="HDV2199428.1"
                     /translation="MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENT
                     KAIPLISYEGDSFYVRQTTLGFILSQSEKNELSLTASWMPLEFDPADNDDYAMQQLDK
                     RDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGV
                     LYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYS
                     ELPEEITNSPMIDRNESFTFITGVSWRF"
     gene            1003..1104
                     /locus_tag="RHX79_004332"
                     /pseudo
     CDS             1003..1104
                     /locus_tag="RHX79_004332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312484.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(1136..1831)
                     /gene="araD"
                     /locus_tag="RHX79_004333"
     CDS             complement(1136..1831)
                     /gene="araD"
                     /locus_tag="RHX79_004333"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HDV2199429.1"
                     /translation="MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDETRQWMVIKPS
                     GVEYDVMTADDMVVVEIASGKVVEGSKKPSSDTPTHLALYRRYAEIGGIVHTHSRHAT
                     IWSQAGLDLPAWGTTHADYFYGAIPCTRQMTAEEINGEYEYQTGEVIIETFEERGRSP
                     AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKH
                     YLRKHGANAYYGQ"
     gene            complement(1825..2685)
                     /locus_tag="RHX79_004334"
     CDS             complement(1825..2685)
                     /locus_tag="RHX79_004334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418039.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HDV2199430.1"
                     /translation="MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDER
                     LSRLDWSTAQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSRDDAVRQRAREIMSKAIR
                     LARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFM
                     NSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTE
                     QSPGQFRDVPFGEGCVDFVGIFKTLHKLNYRGSFLIEMWTEKAKEPVLEIIQARRWIE
                     ARMQEAGFIC"
     gene            complement(2678..3340)
                     /gene="ulaD"
                     /locus_tag="RHX79_004335"
     CDS             complement(2678..3340)
                     /gene="ulaD"
                     /locus_tag="RHX79_004335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HDV2199431.1"
                     /translation="MSRPLLQLALDHSSLEAAQRDVTQLKDSVDIVEAGTILCLNEGL
                     GAVKALREQCPDKIIVADWKVADAGETLAQQAFGAGANWMTIICAAPLATVEKGHAMA
                     QRCGGEIQIELFGNWTLDDARDWHRIGVRQAIYHRGRDAQASGQQWGEADLARMKALS
                     DIGLELSITGGITPADLPLFKDIRVKAFIAGRALAGSANPAQVAGDFHAQIDAIWGGK
                     RA"
     gene            complement(3337..4833)
                     /gene="lyxK"
                     /locus_tag="RHX79_004336"
     CDS             complement(3337..4833)
                     /gene="lyxK"
                     /locus_tag="RHX79_004336"
                     /EC_number="2.7.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-xylulokinase"
                     /protein_id="HDV2199432.1"
                     /translation="MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWA
                     ERDMAELWQCCMAVIRELLTHSGVSGEQIVGIGISAQGKGLFLLDKNNKPLGNAILSS
                     DRRAMEIVRRWQEDGIPEKLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTH
                     DYLRWCLTGVKGCEESNISESNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEIC
                     GEITAQTAVLTGLKAGTPVVGGLFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGL
                     RDGEAHPYVYGRYVNDGEFIVHEASPTSSGNLEWFTAQWGEISFDEINQAVASLPKAG
                     GDLFFLPFLYGSNAGLEMTSGFYGMQAIHTRAHLLQAIYEGVVFSHMTHLNRMRERFT
                     DVHTLRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARVGTGVYRDFSE
                     AQRNLQHPVRTLLPDMTAHQLYQQKYQRYQHLIAALQGFHARIKEHIL"
     gene            complement(4837..>5807)
                     /gene="yiaO"
                     /locus_tag="RHX79_004337"
     CDS             complement(4837..>5807)
                     /gene="yiaO"
                     /locus_tag="RHX79_004337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate transporter
                     substrate-binding protein YiaO"
                     /protein_id="HDV2199433.1"
                     /translation="TYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNDL
                     LQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPF
                     LFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGL
                     KIRTNNSPMNIAAFKVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQK
                     YLSLTHHAYSPLLVVINKAKFDGLSPEFQQALISSAQEAGNYQRKLVAEDQQKIIDGM
                     KEAGVEVITDLDRKAFSDALGNQVRDMFVKDVPQGADLLKAVDEVQ"
BASE COUNT         1243 a         1590 c         1592 g         1382 t
ORIGIN      
        1 ttactatgcc gactcttttt tatcttattt taaaatggaa taccggacat gttaattaat
       61 cgcaatattg tggcgttatt tgcgttgcct tttatggcaa gcgcaactgc ttctgaatta
      121 tccattggtg ctggtgcagc ttataatgaa tcgccttatc gcggttataa tgaaaataca
      181 aaggcaattc cgctgattag ttatgaaggt gattcttttt atgttcgtca gaccacatta
      241 ggttttattc tgtcgcaaag tgaaaaaaat gaacttagcc tgaccgcatc ctggatgccg
      301 ctggaatttg accctgccga taatgacgat tatgccatgc aacagcttga taagcgtgat
      361 agtacggcta tggcgggggt tgcctggtat caccacgagc gttggggaac cgtgaaagcc
      421 tctgcggctg cggacgttct ggataacagc aacggctggg tgggggagct atcggtattc
      481 cacaaaatgc agataggtcg cctgtcgctg acacctgcgc tgggcgttct ctattatgac
      541 gagaatttca gtgactatta ctatggcatt tcagagagtg agtcccgtcg tagcggtctg
      601 gcaagttatt ccgcgcagga tgcctgggtg ccctatgtca gcctgacggc aaaatacccg
      661 ataggagagc acgtcgtatt gatggcgagc gcaggataca gcgagctgcc ggaagagatt
      721 accaacagcc cgatgattga tcgtaatgag agttttacct ttatcaccgg cgtgagctgg
      781 cgtttttaat tcatcggtgg atgtcggtgc ggctggtgct ccgtcgtaat gccacaaagg
      841 ttgttgctct ggattgctct gttcataccg ggaacctggc gtctgaatca ggatcttatg
      901 gctgaacaat cccttgcctt caaatgtcgt aaatggcgca tcggcgggca gcaacaggtt
      961 atgcagtgac tcgacgttgt cggcctgctc catgcaatac ggtttaatga cgttggctat
     1021 ttccggcaga tttttcgcaa gcacaccggt ttaacgccag cagcgtggaa gcggcgttac
     1081 agcaaggaac atatcaattc gtagtgccgg ggcgatgaag ccccggcgtg agggattact
     1141 gcccgtaata ggcattggcc ccatgcttac gcaggtagtg cttatccagc agttcgtttt
     1201 gcatcgcagg gagctgcggc gcaagctggc gcgagaatag gcccatatag gcgcattctt
     1261 cgagtactac ggcgttatgc acggcatcgg cggcgttttt accccatgcg aacgggccgt
     1321 gagaatgcac cagcaccgcc gggatttgtg ccggactcct gccacgttct tcgaaggttt
     1381 caatgatcac ttcgccggtc tgatattcat attcgccgtt aatctcctct gcggtcatct
     1441 gtcgcgtgca ggggatggca ccatagaaat aatcagcgtg cgtggtgccc caggcgggga
     1501 gatccagccc ggcctgcgac cagatggtgg cgtggcgtga gtgggtatgc acaatgccac
     1561 cgatttcggc gtagcgacgg taaagcgcca gatgcgttgg cgtgtcggac gagggctttt
     1621 tgctaccttc caccaccttg ccgctggcta tctcaaccac caccatatcg tcggcggtca
     1681 tcacgtcgta ctcgacgccg gaaggtttga ttaccatcca ttgccgcgtt tcgtctaccg
     1741 cgctgacatt gccccaggtg aacgtcacca gatggtgagc gggaagcgcc agattcgccg
     1801 ccagcacgtc ggctttcagt tgctctaaca tataaatcca gcctcctgca tacgcgcttc
     1861 aatccaacgc cgcgcctgaa taatctccag caccggctct ttggcttttt cggtccacat
     1921 ctcaatcagg aaagaaccgc gatagttcag tttatgcagc gttttgaaga tgccaacgaa
     1981 atcgacgcag ccttcgccaa acggcacgtc gcggaactgt ccgggacttt gctcggtaac
     2041 tggctgggtg tctttcaggt ggatcgcggc gatacggtca atgcccagtt tcagttcggc
     2101 gggaacatca ttgccccagg cgctgaggtt gccgacgtcc gggtagacgg tgaaccacgg
     2161 cgaggcgagc atctcgtccc actttttcca tttactgatg gagttcataa acgcggtgtc
     2221 cataatctcc accgctagca tgacttgtga tgccgccgcc tgttcgaccg cccacgccag
     2281 cccttcagca aaacgttgcc gggtgccttc atcgtggtct tcgtaataga cgtcgtagcc
     2341 cgccagctgg atggtgcgta tgccgagatc gcgtgccaga cgaatcgctt tgctcatgat
     2401 ctcccgtgct cgctggcgta ccgcgtcgtc acggctacca aaaggaaagc gacgatgtgc
     2461 ggacaggcac atcgacggga tcccaacacc cgtttcgatc atcgcggcaa ccagcgaagt
     2521 cctttgtgcg gtgctccagt caagacgaga aagccgttcg tcggtttcat ccaccgacat
     2581 ttcgacaaaa tcaaaaccgc agctttttgc cagcaccagc cgctccggcc aggagagatc
     2641 tttcgccagc gccttttcat aaatccctaa cggatgatta cgcacgcttg cctccccaga
     2701 tagcgtcgat ttgcgcatgg aaatcgccag ccacctgcgc cggatttgct gagcctgcca
     2761 gtgctcgccc ggcaataaac gctttcacgc gaatatcttt aaacagcggc aggtcagcag
     2821 gggtaatccc gccggtaatg gaaagctcaa ggccgatatc ggaaagcgcc ttcatgcgtg
     2881 ccagatcggc ttcgccccac tgttgcccgc tggcctgtgc atcacgaccg cgatgataaa
     2941 tcgcctgccg cacgccaata cgatgccagt cgcgggcgtc gtccagcgtc cagttaccga
     3001 acagctcgat ctgaatttca ccaccgcagc gttgcgccat cgcgtggcct ttttccaccg
     3061 tcgcgagcgg tgcggcgcag atgatggtca tccagttagc gcctgcgcca aatgcctgtt
     3121 gcgcgagcgt ttcaccagcg tcggcgacct tccagtcggc aacgatgatt ttgtcagggc
     3181 actgttcgcg caaggctttc accgcgccaa gcccttcgtt taaacagaga atggtgcccg
     3241 cttcgacaat atcgacgctg tcttttaact gcgtcacgtc gcgctgtgcg gcttcaagtg
     3301 atgagtggtc gagtgccagt tgcagaagtg gtcggctcat aatatgtgct ccttgatgcg
     3361 ggcgtgaaag ccctgaagtg cggcaatgag atgctgatag cgttggtatt tttgttggta
     3421 aagctgatgg gcggtcatat ccggcagcag ggtgcgtacc gggtgctgta agttacgttg
     3481 agcttcgctg aaatcgcgat aaactccggt gccgacacgg gcggcaagtg ccgcgccaaa
     3541 acagccggtt tcttccacct gcggcagctc gatacgcaga ccgctgacgt ccgccagcat
     3601 ttgcatccag acatcggagt gcgccgggcc gccagtgacg cgcagggtgt gcacatcagt
     3661 aaaacgttcg cgcatccggt tgaggtgggt catatggctg aacaccaccc cttcataaat
     3721 ggcctgcaac aggtgtgcgc gggtgtgaat ggcctgcatc ccgtagaaac cgctggtcat
     3781 ctcgagtccg gcgttgctgc cgtacaggaa cggcaggaaa aagagatcgc caccggcctt
     3841 cggcaagctg gcaacggcct ggttgatctc atcaaacgag atttctcccc actgtgcggt
     3901 aaaccattcg aggttgccgg aagaggtggg gctggcttcg tgaacgataa attcaccatc
     3961 gttaacgtag cgaccataga catacggatg cgcttcaccg tcacgtaaac cgcgggttat
     4021 gccgctggtc accgcccagg tgcccatcac cgcattaagg gtaaattcgt cttcgatccc
     4081 ggcgcagagt gcggtggaaa ccacatcaaa caggccgccg acaacgggcg tacccgcttt
     4141 cagaccggtc agtacggctg tctgagcggt gatctccccg cagatttcgg cagatccgac
     4201 aacaggcggc agggcgtgat tgatttcagc aatccccagc cagtcggtga ggcacgggtc
     4261 atattcccca agactcatgt tgtagagatt ggactcggaa atattgctct cttcacagcc
     4321 tttgacgccg gttaaacacc agcgcaggta gtcgtgcgtc atcatcacgc agccaatttg
     4381 cgcgtagcgt tccggttcgt gctctttaag ccaacgtaac agcgataccg gatgcccggt
     4441 ccacaaggtt tgtcgggtca gcgggtagag tttttccggg atgccatctt cctgccagcg
     4501 acgaacgatt tccatcgccc ggcgatccga ggataaaatg gcgttaccga gcggcttgtt
     4561 gtttttatcc agcaaaaaca agccttttcc ttgtgcggag ataccgatac cgacaatttg
     4621 ttccccgcta acgccggaat gggtaagcag ttcgcgaatg acagccatgc agcattgcca
     4681 cagttctgcc atatcgcgct ctgcccaacc tggctgcggg cttaatgcgc acagcggcag
     4741 gcgctgcacg cctgcctccc ggccttcgcg gtcatacagc ccggctttca gccagctacc
     4801 gccacaatct aaccccagcc agtattgcgt catggtttat tgcacctcat ccacggcttt
     4861 cagtagatca gcaccctgcg gaacatcttt tacaaacatg tcgcgaacct gattacccag
     4921 agcgtcgcta aaggctttgc ggtcgagatc ggtgatgact tccacgcccg cttctttcat
     4981 gccgtcgatg attttttgct gatcttcggc aaccagtttg cgctggtagt tacccgcttc
     5041 ctgcgcagat gaaattagcg cttgctggaa ctccgggctt aagccatcaa acttcgcttt
     5101 gttgatcacc accagaagcg gggaataggc gtggtgcgtc agagaaaggt acttctgcac
     5161 ttcgaaaaat tttgctgacc agacgacgtt gatcgggtgt tcctgagcgt cgatagtgcg
     5221 ggtttccagc ccggtataga cttcggcaaa cggcatcggg atcgggttag cgccaaagac
     5281 tttgaatgcg gcgatattca tcgggctatt gttggtgcga attttcagcc ctttcaggtc
     5341 ggcgggggtt ttaaccggtg cgcgcgagtt ggtgacatcg cgccagccgt tttcccagta
     5401 ggccagtact tttagtcctt taccttcaag tgaggctttc agatcatcac cgactttgcc
     5461 gtcgagcgtt ttatgcgcgt gagcggtatc gcggaacagg aaagggacat caagcaagtt
     5521 catcactggt gataacccgg caaagttatt cgagccggac atttccatat cgatggtgcc
     5581 gccacgtacg ccgctgatca tcgcctgcgc gttaccgagg gtgctatccg gaaacaattt
     5641 taatttcagc tcgcctttgg ttctctcctg caataaatca ttgaattttt tcgccgcaat
     5701 atgttgcgag tcggtttgtg aggtttcata accgaaacgt aaagattgcg ccgccagaga
     5761 agatgtgctg aatgcagcca ggccagcaat gaataatgcg taggtta
//
LOCUS       DAPGWB010000223         5795 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.225, whole genome shotgun sequence.
ACCESSION   DAPGWB010000223 DAPGWB010000000
VERSION     DAPGWB010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5795
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.225"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(283..474)
                     /locus_tag="RHX79_004338"
     CDS             complement(283..474)
                     /locus_tag="RHX79_004338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199434.1"
                     /translation="MNISTETREILRNYRAVINARRREMGQKPLTTAQIVDEICDFVA
                     NQQAVFLGGHYILQGSRNR"
     gene            complement(471..893)
                     /locus_tag="RHX79_004339"
     CDS             complement(471..893)
                     /locus_tag="RHX79_004339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1380 family protein"
                     /protein_id="HDV2199435.1"
                     /translation="MYCTVKEIIRDVLDTDVPASECVFAVVLTRGDVRHIAQDWNLSD
                     DELETVMQRLDDAFEHGADVSVVHDVVRELMEEKRASRHVTVPAVMLEKVMALAGSEM
                     KRLYAVGSENGGDGDAFVREEREAMDVVLQALDGETMS"
     gene            complement(940..1242)
                     /locus_tag="RHX79_004340"
     CDS             complement(940..1242)
                     /locus_tag="RHX79_004340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirestriction protein"
                     /protein_id="HDV2199436.1"
                     /translation="MMPEYEGGFWHFIRLPDGGGYMMPDGDRFHLVNGENWFDRTVSA
                     DAAGIILTSLVINRQLWLYHDSGSAGLTHLYRMRDAQLWSHIEFHPECNAIYAALD"
     gene            complement(1781..2557)
                     /locus_tag="RHX79_004341"
     CDS             complement(1781..2557)
                     /locus_tag="RHX79_004341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199437.1"
                     /translation="MNENSTLNALICRHARNLLLAQGWPEETDVDQRNPKYPGWISIY
                     VLLDAPRLATLLINRYGGVLPPLLASAIQKLTGTGAELVLSGSQWQSLPVLPADGTQV
                     SFPYAGEWLTEDEIRAVLDAVHDVVRSVSCRVAEDARRIRAALTTTGKTLLTRQTRRF
                     RLVVKESDHPCWLDEDDENLPVVLDAILNRGARFSSVEMYLVSDCIEHILSSGLACDV
                     LRIPDEPPRRWFDRDILREVVLEARDEIRSMADALAKIRK"
     gene            complement(2608..3042)
                     /locus_tag="RHX79_004342"
     CDS             complement(2608..3042)
                     /locus_tag="RHX79_004342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001562898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1380 domain-containing protein"
                     /protein_id="HDV2199438.1"
                     /translation="MYGTCETLCRELAAQYTENTPLMLVVWSPEEIQALADGMEISLT
                     GHEIRTVLARLEDIPEDQRIESGISSAAVMEIIRNESENRLVTVPAELLASLIQTAEQ
                     ALWKREWAARDHGLAVPECVTRRQAVINQARTLLKNNTHEND"
     gene            complement(3056..3277)
                     /locus_tag="RHX79_004343"
     CDS             complement(3056..3277)
                     /locus_tag="RHX79_004343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199439.1"
                     /translation="MNYAGHEKLRAEVAEVANAMCDLRTTMNEMERRYSFNANTLPER
                     LVRQTLFRANRLLMEAYTEILELDSCFKD"
     gene            complement(3278..3961)
                     /locus_tag="RHX79_004344"
     CDS             complement(3278..3961)
                     /locus_tag="RHX79_004344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methylase"
                     /protein_id="HDV2199440.1"
                     /translation="MSRFILGDCVRVMATFPDNAVDFILTDPPYLVGFRDRSGRTIAG
                     DVNDDWLQPASNEMYRVLKKDALMVSFYGWNRIDRFMAAWKRAGFSVVGHLVFTKNYT
                     SKAAYVGYRHECAYILAKGRPALPQKPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESF
                     THPNAIVLDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQRLAAVQRAMQQGAAN
                     DNWFEPEAA"
     gene            complement(4037..4330)
                     /locus_tag="RHX79_004345"
     CDS             complement(4037..4330)
                     /locus_tag="RHX79_004345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002430945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199441.1"
                     /translation="MFLGFVWRVTKDVAGLLFLLRRLTRRGRNAACGQCPASGRARDG
                     RFYRSRLALVTVYASREPFSDERPSSRFRGIALPSNRRRLRYSTVGLTRYRTR"
     gene            4477..5439
                     /gene="parM/stbA"
                     /locus_tag="RHX79_004346"
     CDS             4477..5439
                     /gene="parM/stbA"
                     /locus_tag="RHX79_004346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000959884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid segregation protein ParM"
                     /protein_id="HDV2199442.1"
                     /translation="MLVFIDDGSTNIKLQWQESDGTIKQHISPNSFKREWAVSFGDKK
                     VFNYTLNGEQYSFDPISPDAVVTTNIAWQYSDVNVVAVHHALLTSGLPVSEVDIVCTL
                     PLTEYYDRNNQPNTENIERKKANFRKKIILNGGDTFTIKDVKVMPESIPAGYEALQEL
                     DELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLARTKGS
                     SYLADDIIIHRKDNNYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEFSGYTHV
                     MVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIGN"
     gene            5442..5792
                     /locus_tag="RHX79_004347"
     CDS             5442..5792
                     /locus_tag="RHX79_004347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001630992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid partitioning/stability family protein"
                     /protein_id="HDV2199443.1"
                     /translation="MDKRRTIAFKLNPDVNQTDKIVCDTLDSIPQGERSRLNRAALTA
                     GLALYRQDPRAPFLLCELLTKETTFSDIVNILRSLFPKEMADFNSSIVTQSSSQQEQK
                     SDEETKKNAMKLIN"
BASE COUNT         1450 a         1625 c         1481 g         1239 t
ORIGIN      
        1 ggcctgacga ccggatgccg ccaggcagcc gggagccgaa ggtgcgcccg gcagacagaa
       61 caacactgca gtagtcagaa tcagagcagc agataaagga acaacaacaa catcaggaac
      121 agttccgcaa cataagaaag aaacactcct gagtcagaca catcacagac gggaagggta
      181 acgggcgacg cgccagcgtg gcccgcttcc cttccggcag gcgtcagcct gccaggggtt
      241 ttcgcgcggg ctgacaggcg gcctccaccg cctgcccctg tatcacctgt ttctgctgcc
      301 ctgtaagatg tagtgaccgc ccaggaaaac cgcctgctga ttcgccacaa aatcgcagat
      361 ttcatcaaca atctgcgcgg tggtgagcgg tttctgcccc atttcacgac gccgcgcatt
      421 aatcacggcc ctgtaattac gcagaatttc gcgggtttct gtgctgatat tcatgacatc
      481 gtctccccgt ccagcgcctg taacacaacg tccattgctt cgcgttcctc cctgacgaat
      541 gcgtcaccgt cgcccccgtt ctcactcccg acggcataca ggcgcttcat ttcactgcct
      601 gccagcgcca tcactttttc cagcatcacc gccgggactg tcacatgacg gctggcgcgc
      661 ttttcttcca tcagttcacg aacaacgtcg tgaacaacgc tgacatccgc accatgctca
      721 aaggcatcgt ccagccgctg catgacggtt tccagctcat cgtctgacag gttccagtcc
      781 tgggctatgt gacgcacatc cccacgggtc agcaccacgg caaaaacgca ttcactggcc
      841 ggcacgtctg tatccagtac atcgcggatg atttctttaa cagtacagta catgttctcg
      901 tctcctttac aggggcggca ttgccgcccc gtccgttaat cagtcaagtg ccgcgtaaat
      961 cgcgttgcat tcggggtgaa attcgatgtg gctccacaac tgcgcatcgc gcatcctgta
     1021 caggtgagtc agccctgcgc taccgctgtc gtggtacagc cacaactggc ggttaatcac
     1081 aagggaagtc aaaatgatgc ctgcggcatc ggcactgacc gtgcggtcaa accagttttc
     1141 accgttaacc agatggaaac ggtcgccatc cggcatcatg taaccgccac cgtccggcag
     1201 gcggatgaag tgccagaatc cgccttcata ttccggcatc atttttttcg ccagcgcgta
     1261 tacagacgct tcggcataca gaaaatccag gccaaacagg taaggcagaa aggagagacg
     1321 gtcgcactct tcaacattca gagtgacagg tttcgcatat tgcatgatgt tttcctccgt
     1381 tgttcacata ttccgcgaca ccgggcggtg ccgtgcctcc atctttgccg ggcctgcagg
     1441 gttgcaaggg cgcaagggaa gccgcagcct gacgcgcacg gctgacggga gttggagggt
     1501 gagaccgcga aatctgagcg ggtgaacgac cggaaaatca cggcagacgg gaaggaggga
     1561 ccgggtgacc gcagcggttc accttacctt gcaacccgcc cgcagaagcc cggctacgat
     1621 ggaggcacgg cacagcccgc acacgacgat gaggccacat aactgaaaac ccacaaggcc
     1681 atgccccgca tggccgggta aagcggagcc tgcggcgaca tccttttgct ctttccgggg
     1741 accggctgga aaaggcggag atttttcccc gccagcgtca tcatttccgg atttttgcca
     1801 gtgcatccgc catgctgcgg atttcatccc gtgcctccag aacaacctcc cgcagaatat
     1861 cccggtcaaa ccagcggcgg ggcggttcat ccggtatacg cagcacatcg caggccagcc
     1921 cactggacag gatatgctca atacaatcgc tgaccagata catttccacc gacgaaaaac
     1981 gagcgccccg gttcaggatg gcatcgagca ccacgggcag gttttcgtcg tcttcatcga
     2041 gccagcaggg gtgatcgctt tccttcacaa ccaggcgaaa gcggcgcgtc tggcgggtca
     2101 gcaacgtctt accggttgtg gtcagcgccg ccctgatacg ccgcgcatct tctgccaccc
     2161 ggcaactgac actgcgtacc acatcgtgca ccgcatcaag aacggccctg atttcgtctt
     2221 cggtcagcca ttctccggca tacgggaaag acacctgcgt tccgtctgcc ggaagtaccg
     2281 gcagcgactg ccactgactg ccggacagaa caagttccgc cccggttccg gtcagtttct
     2341 gaatggcgga ggccaggagc ggcggcagta cgccgccgta acggttgata agtaacgtcg
     2401 ccagccgggg cgcatccagc agaacataaa tgctgatcca gcccggatac ttcgggttac
     2461 gctggtcaac atccgtctct tccggccagc cctgcgccag cagcaggttg cgggcgtgac
     2521 gacaaatcag tgcgttcagc gtgctgtttt cgttcatgat taagcgttct ccctgtatcg
     2581 ccgcccgcag ggcaggcggc gataacatca gtcgttttcg tgtgtgttgt ttttcagcag
     2641 ggtgcgggcc tgattaatca ctgcctgacg gcgggtgacg cattccggga cggcgaggcc
     2701 atgatcccgg gcggcccatt cacgtttcca caatgcctgt tcagcggtct gaatcaggga
     2761 cgccagcagt tcagccggga cggtcaccag gcggttttcg ctctcgttgc ggataatctc
     2821 catcaccgca gcggaagaaa taccggactc aatccgctgg tcttccggga tgtcctccag
     2881 gcgtgccagg acggtcctga tttcatgacc ggtcagagaa atttccatac cgtcagccag
     2941 tgcctgaatc tcttccgggg accagacaac cagcatcagc ggcgtgttct ccgtatactg
     3001 cgctgccagc tcacggcaga gcgtttcgca tgttccgtac attctcgtct ccttctcaat
     3061 ctttgaagca ggaatccagt tccagaattt cggtatatgc ctccatcagg aggcggtttg
     3121 cacgaaacag cgtctgacgc accagacgtt ccggcagggt gttggcatta aagctgtacc
     3181 gccgctccat ctcattcatg gttgtacgca ggtcgcacat ggcattggcc acctccgcca
     3241 cctcggcgcg cagtttttcg tgtccggcat agttcattta cgcagcctcc ggttcaaacc
     3301 agttatcatt cgcggccccc tgctgcatgg cccgttgcac ggcggccagt cgttgctgtc
     3361 cggcacggtg atactgttca agcagctcga taccgatata ccggcgtccg gactggaggg
     3421 cggcgacgca tgttgagccg ctgcctgcaa acgggtccag cacaatcgcg ttcggatgtg
     3481 tgaagctctc aatcagtggt tgcaggctgg taacaggctt ttccgtcggg tgatggcggt
     3541 tgcctgaata tttccagccc agcacgtcgg gcaatggctt ctgaggcagc gccggacgtc
     3601 cttttgccag gatataggcg cattcgtggc gatagcccac atatgcggcc ttcgatgtgt
     3661 agtttttggt gaagacgaga tgccctacaa cgctgaatcc ggcgcgtttc caggctgcca
     3721 taaagcggtc aatacggttc cagccataga aactcaccat cagcgcgtct tttttgagta
     3781 cgcggtacat ctcattactg gcaggttgca gccagtcatc gttaacgtca ccggcaatgg
     3841 tgcgcccgga acggtcacgg aaaccgacga gatacggcgg gtcggtgagg atgaaatcga
     3901 cagcattgtc cggaaacgtg gccataactc gcacgcagtc acccaggata aaacgggaca
     3961 taaaagcctc cttctcttac agagggcacc gggagggcac ccctgtggtg cccgttcccc
     4021 gctgcctgtg ggctgttcac cgcgtccggt aacgggtcag gccgaccgtg gaataccgca
     4081 gccgtcgtct gtttgacggc aaggctatgc cgcgaaagcg gcttgaaggg cgttcatcag
     4141 aaaagggctc ccggctggcg tacactgtca ccaacgccag ccgggagcgg taaaagcgcc
     4201 cgtcccgtgc ccggccggac gcgggacact gaccacaggc agcgttcctg ccgcgccgcg
     4261 tcagccggcg cagtaaaaag aggagcccgg cgacatcttt tgtcacccgc caaacaaaac
     4321 ccaaaaacaa cccacaccca acccaataaa acaccaaaac aagacaaata atcattgatt
     4381 gatggttaaa atggggtaaa cttgacaaat aaacccactt gaaacccaaa acatacccaa
     4441 atacacacca aaaaaacacc ataaggagtt ttataaatgt tggtattcat tgatgacggt
     4501 tcaacaaaca tcaaactaca gtggcaggaa agcgacggaa caattaaaca gcacattagc
     4561 ccgaacagtt tcaaacgcga gtgggcagtc tcttttggtg ataaaaaggt ctttaactac
     4621 acactgaacg gcgaacagta ttcatttgat ccaatcagcc cggatgctgt agtcacaacc
     4681 aatatcgcat ggcaatacag cgacgttaat gtcgttgcgg tgcatcacgc cttactgacc
     4741 agtggtctgc cggtaagcga agtggatatt gtttgcacac ttcctctgac agagtattac
     4801 gacaggaata accaacccaa tacggaaaat attgagcgta agaaagcaaa cttccggaaa
     4861 aaaattatat taaatggtgg ggatacattc acaataaaag atgtaaaagt catgcctgaa
     4921 tctataccag caggttatga agctctacaa gaactggatg agttagattc tttattaatt
     4981 atagacctcg ggggcaccac attagatatt tctcaggtaa tggggaaatt atcagggatc
     5041 agtaaaatat acggagactc atctcttggt gtatctctgg tcacatctgc agtaaaagat
     5101 gcactttctc ttgcgagaac aaaaggaagt agctatcttg ctgacgatat aattattcac
     5161 agaaaagaca acaactatct gaagcaacga attaatgatg agaacaaaat atcaatagtc
     5221 accgaagcaa tgaatgaagc acttcgtaaa cttgagcaac gtgtattaaa tacgctcaat
     5281 gaattttctg gttatacgca tgttatggtt ataggcggtg gcgcagaatt aatatgcgat
     5341 gcagtaaaaa aacacacaca gattcgtgat gaacgttttt tcaaaaccaa taactctcaa
     5401 tatgatttag ttaacggtat gtatctcata ggtaattaat aatggacaag cgcagaacca
     5461 ttgccttcaa actaaatcca gatgtaaatc aaacagataa aattgtttgt gatacactgg
     5521 acagtatccc gcaaggggaa cgcagccgcc ttaaccgggc cgcactgacg gcaggtctgg
     5581 ccttatacag acaagatccc agggcccctt tccttttatg tgaactgctg acgaaagaaa
     5641 ccacattttc agatatcgtg aatatattga gatcgctatt tccaaaagag atggccgatt
     5701 ttaattcttc aatagtcact caatcctctt cacaacaaga gcaaaaaagt gatgaagaga
     5761 ccaaaaaaaa tgcgatgaag ctaataaatt aattc
//
LOCUS       DAPGWB010000224         5746 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.226, whole genome shotgun sequence.
ACCESSION   DAPGWB010000224 DAPGWB010000000
VERSION     DAPGWB010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5746
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.226"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            73..963
                     /gene="prpB"
                     /locus_tag="RHX79_004348"
     CDS             73..963
                     /gene="prpB"
                     /locus_tag="RHX79_004348"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HDV2199444.1"
                     /translation="MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYL
                     SGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVK
                     SMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTD
                     ALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATP
                     LFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYES
                     INYYQYEEKLDDLFARSQVK"
     gene            1008..2177
                     /gene="prpC"
                     /locus_tag="RHX79_004349"
     CDS             1008..2177
                     /gene="prpC"
                     /locus_tag="RHX79_004349"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HDV2199445.1"
                     /translation="MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHY
                     RGYDILDLAEHCEFEEVAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPA
                     ASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERI
                     QPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSD
                     MYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPV
                     YTIADPRHQVIKRVAKQLSQEGGSLKMYNIADRLETVMWESKKMFPNLDWFSAVSYNM
                     MGVPTEMFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYVGPEDRQFVALDKRQ"
     gene            2211..3662
                     /gene="prpD"
                     /locus_tag="RHX79_004350"
     CDS             2211..3662
                     /gene="prpD"
                     /locus_tag="RHX79_004350"
                     /EC_number="4.2.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate dehydratase"
                     /protein_id="HDV2199446.1"
                     /translation="MSAQINNIRPEFDREIVDIVDYVMNYEISSKVAYDTAHYCLLDT
                     LGCGLEALEYPACKKLLGPIVPGTVVPNGVRVPGTQFQLDPVQAAFNIGAMIRWLDFN
                     DTWLAAEWGHPSDNLGGILATADWLSRNAVASGKAPLTMKQVLTAMIKAHEIQGCIAL
                     ENSFNRVGLDHVLLVKVASTAVVAEMLGLTREEILNAVSLAWVDGQSLRTYRHAPNTG
                     TRKSWAAGDATSRAVRLALMAKTGEMGYPSALTAPVWGFYDVSFKGESFRFQRPYGSY
                     VMENVLFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACIRIIDK
                     KGPLNNPADRDHCIQYMVAIPLLFGRLTAADYEDNVAQDKRIDALREKINCFEDPAFT
                     ADYHDPEKRAIANAITLEFTDGTRFEEVVVEYPIGHARRRQDGIPKLVDKFKINLARQ
                     FPTRQQQRILEVSLDRTRLEQMPVNEYLDLYVI"
     gene            3702..5588
                     /gene="prpE"
                     /locus_tag="RHX79_004351"
     CDS             3702..5588
                     /gene="prpE"
                     /locus_tag="RHX79_004351"
                     /EC_number="6.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate--CoA ligase"
                     /protein_id="HDV2199447.1"
                     /translation="MSFSEFYQRSINEPEQFWAEQARRIDWQTPFTQTLDHSNPPFAR
                     WFCEGRTNLCHNAIDRWLEKQPEALALIAVSSETEEERTFTFRQLHDEVNAVASMLRS
                     LGVQRGDRVLVYMPMIAEAHITLLACARIGAIHSVVFGGFASHSVAARIDDAKPVLIV
                     SADAGARGGKIIPYKKLLDDAISQAQHQPRHVLLVDRGLAKMARVSGRDVDFASLRHQ
                     HIGARVPVAWLESNETSCILYTSGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGSV
                     FFCASDIGWVVGHSYIVYAPLLAGMATIVYEGLPTWPDCGVWWKIVEKYQVSRMFSAP
                     TAIRVLKKFPTAEIRKHDLSSLEVLYLAGEPLDEPTASWVSNTLDVPVIDNYWQTESG
                     WPIMAIARGLDDRPTRLGSPGVPMYGYNVQLLNEVTGEPCGVNEKGMLVVEGPLPPGC
                     IQTIWGDDDRFVKTYWSLFSRPVYATFDWGIRDADGYHFILGRTDDVINVAGHRLGTR
                     EIEESISSHPGVAEVAVVGVKDALKGQVAVAFVIPKESDSLEDRDVAHSQEKAIMALV
                     DSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLDQIRQ
                     AMEE"
BASE COUNT         1289 a         1584 c         1657 g         1216 t
ORIGIN      
        1 aaggcaattg tggcacaccc cttgctttgt ctttatcaac gcaaataaca agttgataac
       61 aaaggatggg ctatgtctct acactctcca ggtaaagcgt ttcgcgctgc actgactaaa
      121 gaaaatccat tgcagattgt tggcaccatc aacgctaatc atgcgctgtt ggcgcagcgt
      181 gccggatatc aggcaattta tctttctggc ggtggcgtgg cggcaggttc gctggggctg
      241 cccgatctcg gtatttctac ccttgatgat gtgctgaccg acattcgccg tatcaccgac
      301 gtttgttcgc tgccgctgct ggtggatgcg gatatcggtt ttggttcttc ggcctttaac
      361 gtggcgcgca ccgtgaaatc gatgattaaa gccggtgcgg caggattgca tattgaagat
      421 caggttggtg cgaaacgctg cggtcatcgt ccgaataaag cgatcgtctc gaaagaagag
      481 atggtggatc ggatccgcgc ggcggtggat gcgaaaaccg atcctgattt tgtgatcatg
      541 gcgcgcaccg atgctctggc ggtagagggg ctggatgcgg cgatcgagcg tgcgcaggcc
      601 tatgttgaag cgggtgccga gatgttgttc ccggaggcga ttaccgaact cgccatgtac
      661 cgccagtttg ccgatgcggt gcaggtgcca atcctcgcca acattaccga atttggcgca
      721 acaccgctgt ttaccaccga cgaattacgc agcgcccatg tcgcaatggc gctgtacccg
      781 ctttcagcgt tccgcgccat gaaccgcgcc gctgaacatg tctacaacgt cctgcgtcag
      841 gaaggcacgc agaaaagcgt catcgatacc atgcaaaccc gcaacgagct gtacgaaagc
      901 atcaactact accagtacga agagaagctc gacgacctgt ttgcccgtag ccaggtgaaa
      961 taaaacacaa cgaaaaatat ctcgacccta caaatgacga ggacaatatg agcgacacaa
     1021 cgatcctgca aaacagtacc catgtcatta aaccgaaaaa atcggtagca ctttctggcg
     1081 ttccggcggg caatacggcg ctctgcaccg tgggtaaaag tggcaatgac ctgcattacc
     1141 gtggctacga tattcttgat ctggcggaac attgcgaatt tgaagaagtg gcgcacctgc
     1201 tgatccacgg caaactgccg acccgtgacg aactcgccgc ttacaaaacg aaactgaaag
     1261 ccctgcgtgg tttaccagct aatgtgcgta ccgtgctgga agccttaccg gcggcgtcgc
     1321 acccgatgga tgtcatgcgc accggcgttt ccgcgctcgg ctgcacactg ccagaaaaag
     1381 aggggcacac tgtctctggc gcgcgggata ttgccgacaa actgctggca tcacttagct
     1441 cgattctcct ttattggtat cactacagtc acaacggcga acgcatccag ccggaaaccg
     1501 atgacgactc catcggcggt cacttcctgc atctgctgca cggcgaaaag ccatcgcaaa
     1561 gctgggaaaa ggcgatgcat atctcgctgg tgctgtacgc cgaacacgag tttaacgcct
     1621 ccacctttac cagtcgggtg attgcgggca ccggctctga tatgtattcc gcgattattg
     1681 gcgcgattgg cgcactgcgc gggccaaaac acggcggggc gaatgaagtg tcgctggaga
     1741 tccagcaacg ctacgaaacg ccggacgaag ccgaagcaga tatccgcaag cgcgtggaaa
     1801 acaaagaagt ggtcattggt tttggtcatc cggtttacac catcgctgac ccgcgccacc
     1861 aggtgattaa acgtgtggcg aagcagctct cgcaggaagg cggttcgctg aagatgtata
     1921 acatcgccga tcgcctggaa acagtgatgt gggagagcaa aaagatgttc cccaatctcg
     1981 actggttctc cgctgtttcc tacaacatga tgggcgttcc caccgagatg ttcacaccac
     2041 tgtttgttat cgcccgcgtc accggctggg cggcgcacat tatcgaacaa cgtcaggaca
     2101 acaaaattat ccgtccttcc gccaattatg ttggaccgga agaccgccag tttgtcgcgc
     2161 tggataagcg ccagtaaacc tctacgaata acaataagga aacgtaccca atgtcagctc
     2221 aaatcaacaa catccgcccg gaatttgatc gtgaaatcgt tgatatcgtc gattacgtga
     2281 tgaactacga aatcagctcc aaagtagcct acgacaccgc ccattactgc ctgctcgaca
     2341 cgctcggctg cggtcttgaa gctctcgaat acccggcctg taaaaaactg ctggggccaa
     2401 ttgtccccgg cactgtcgta cccaacggcg tgcgcgtccc cggaactcag ttccagctcg
     2461 accccgtcca ggcggcattt aacatcggcg cgatgatccg ctggctcgat ttcaacgata
     2521 cctggctggc ggcggagtgg ggccatcctt ccgacaacct cggcggcatt ctggcaacgg
     2581 cggactggct ttcgcgcaac gcggtcgcca gcggcaaagc gccgttgacc atgaaacagg
     2641 tgctgaccgc aatgatcaaa gcccatgaaa ttcagggctg catcgcgctg gaaaactcct
     2701 ttaaccgcgt cggcctcgac cacgttctgt tagtgaaagt ggcttccacc gccgtggtcg
     2761 ccgaaatgct cggcctgacc cgcgaggaaa ttctcaacgc cgtttcgctg gcgtgggtgg
     2821 acggtcagtc gctgcgcacc tatcgccatg cgccgaacac cggcacgcgt aaatcctggg
     2881 cggcgggcga tgccacttcc cgcgcggtac gtctggcact gatggcgaaa acgggcgaaa
     2941 tgggttaccc gtcagccctg actgcgccgg tgtggggctt ctacgacgtc tcctttaaag
     3001 gtgaatcgtt ccgcttccag cgcccgtacg gttcctacgt tatggaaaat gtgctgttca
     3061 aaatctcctt cccggcggag ttccactccc agacggcagt tgaagcagcg atgacgctct
     3121 atgaacagat gcaggcagca ggcaaaacgg cggcggatat cgaaaaagtg accattcgca
     3181 cccacgaagc ctgtattcgc atcatcgaca aaaaaggacc gctcaataac ccggcagacc
     3241 gcgatcactg cattcagtac atggtggcga tcccgctgct gttcgggcgc ttaacggcgg
     3301 cagattacga ggacaacgtg gcgcaagata aacgtatcga cgccctgcgc gagaagatca
     3361 attgctttga agatccggca tttaccgctg actaccacga cccggaaaaa cgcgccatcg
     3421 ccaatgccat tacccttgag ttcaccgacg gcacacgatt tgaagaagtg gtggtggagt
     3481 accccattgg tcatgctcgc cgccgtcagg atggtattcc gaaactggtc gataaattca
     3541 aaatcaatct cgcgcgccag ttcccgactc gccaacagca gcgcattctg gaggtttctc
     3601 tcgacagaac tcgcctggaa cagatgccgg tcaatgagta tctcgacctg tacgtcattt
     3661 aagcaaacag cggtaaggcg taagttcaac aggagagcat tatgtctttt agcgaatttt
     3721 atcagcgttc gattaacgaa ccggagcagt tctgggccga gcaggcccgg cgtattgact
     3781 ggcagacgcc ctttacgcaa acgctcgatc acagcaatcc gccgtttgcc cgttggtttt
     3841 gtgaaggccg aaccaacttg tgccacaacg ctatcgaccg ctggctggag aaacaaccag
     3901 aggcgctggc gctgattgcc gtctcttcgg aaacagaaga agagcgcacc tttacctttc
     3961 gtcagcttca tgacgaagta aacgcggtgg cgtcaatgct gcgctcgctg ggcgtgcagc
     4021 gtggcgatcg ggtgctggtg tatatgccga tgattgccga agcgcatatt actctgctgg
     4081 cctgcgcgcg cattggcgct attcattcgg tggtgtttgg gggatttgcc tcgcacagcg
     4141 tggcggcgcg aattgatgat gctaaaccgg tgctgattgt ctcggctgat gccggagcgc
     4201 gcggtggcaa aatcattccc tataaaaaat tgctcgacga tgcgataagt caggcgcagc
     4261 accagccacg ccatgttttg ctggtggatc gcgggctggc gaaaatggca cgcgtcagcg
     4321 ggcgggatgt cgatttcgcg tcgttgcgcc atcaacacat cggcgcgcgg gtaccggtgg
     4381 cgtggctgga atccaacgaa acctcctgca ttctctacac ttccggcacg accggcaaac
     4441 ctaaaggcgt gcagcgtgac gtcggcggat atgcggtggc gctggcgacc tcgatggaca
     4501 ccatttttgg cggcaaagcg ggcagcgtgt tcttttgcgc atcggatatc ggctgggtgg
     4561 tggggcattc gtatatcgtt tacgcgccgc tgctggcggg gatggcgact atcgtttacg
     4621 aaggattgcc gacctggccg gactgcggcg tgtggtggaa aatcgtcgag aaatatcagg
     4681 ttagccggat gttctcagcg ccgaccgcca ttcgcgtgct gaaaaaattc cctaccgctg
     4741 aaattcgcaa acacgatctc tcgtcgctgg aagtgctcta tctggctgga gaaccgctgg
     4801 acgagccgac cgccagttgg gtgagcaata cgctggatgt gccggtcatc gacaactact
     4861 ggcagaccga atccggctgg ccgattatgg cgattgctcg cggtctggac gacaggccga
     4921 cgcgtctggg aagccccggc gtgccgatgt atggctataa cgtgcagttg cttaatgaag
     4981 tcaccggcga accgtgtggc gtcaacgaga aagggatgct ggtggtggaa gggccgctgc
     5041 cgccgggctg tattcagacc atctggggcg acgacgaccg ctttgtgaag acttactggt
     5101 cgctgttttc ccgcccggtg tacgccacct ttgactgggg catccgtgac gctgacggtt
     5161 atcactttat tctcgggcgc actgacgatg taattaacgt tgccgggcat cgtctgggca
     5221 cgcgcgagat tgaagagagt atctccagcc atccgggcgt tgccgaagtg gcggtggttg
     5281 gggtgaaaga tgcgctgaaa gggcaggtgg cggtggcgtt tgtcattccg aaagagagcg
     5341 atagtctgga agatcgtgat gtggcgcatt cgcaagagaa ggcgattatg gcgctggtgg
     5401 acagccagat tggcaacttt ggtcgcccgg cgcacgtctg gtttgtctcg caattgccga
     5461 aaacgcgatc cggaaaaatg ctgcgccgca cgatccaggc aatttgcgaa ggacgcgatc
     5521 ctggggatct gacgaccatt gatgatcctg cgtcattgga tcagatccgc caggcgatgg
     5581 aagagtaagg tattgtcgga tgcgtcgcgt ggcgcatccg acaccatgcg ccgatgcctg
     5641 atgcgacgct taccgcgtct tattatgcct acaggcctga accgtaggtc ggataaggcg
     5701 ctcgcgtcgc atccgacacc ccgcgccgat gcctgatgcg acgctg
//
LOCUS       DAPGWB010000225         5570 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.227, whole genome shotgun sequence.
ACCESSION   DAPGWB010000225 DAPGWB010000000
VERSION     DAPGWB010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5570)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5570)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5570
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.227"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            195..716
                     /locus_tag="RHX79_004352"
     CDS             195..716
                     /locus_tag="RHX79_004352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDV2199448.1"
                     /translation="MAVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDK
                     QTGEMREQTEWHRVVLFGKLAEVAGEYLRKGAQVYIEGQLRTRSWEDNGITRYVTEIL
                     VKTTGTMQMLGSAPQQNAQTQPEPQQNGQLQSADATKKGGAKTKGRGRKAAQPEPQQP
                     SEPAYDFDDDIPF"
     gene            772..1005
                     /locus_tag="RHX79_004353"
     CDS             772..1005
                     /locus_tag="RHX79_004353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF905 domain-containing protein"
                     /protein_id="HDV2199449.1"
                     /translation="MSEYFRIFQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLV
                     VRNNSGLVWRTWNFEDGAGYWMNHVIRNFGILK"
     gene            1069..3027
                     /locus_tag="RHX79_004354"
     CDS             1069..3027
                     /locus_tag="RHX79_004354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDV2199450.1"
                     /translation="MSVTESKTKTERKSSRKPAKTQETVLSALLAQTEEVSVSLASLI
                     KSPLNVRTVPYSAESVSELAESIKGVGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLA
                     ERGIIPADWPVRVKVIPQELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQIG
                     DLLGYSPRHVQRMLKLADLAPVILDALAEDRITTEHCQALALENDTARQVQVFEAACQ
                     SGWGGKPDVRVIRNLITESEVAVAGNSKFRFVGADAFSPDELRTDLFSDDEGGYVDCV
                     ALDAALLEKLQAVAEFLREAEGWEWCAGRMEPVGECREDAGTYRCLPEPEAVLTEAEE
                     ERLNELMARYDALENQCEESDLLEAEMKLMRCMAKVRAWTPEMRAGGGVVVSWRYGNV
                     CVQRGVQLRSEDDAADDADRTEQVQEKASVEEISLPLLTKMSSERTLAVQAALMQQPD
                     KSLTLLAWTLCLNVFGSGAYSKPAQISLECKHYSLTSDAPSGKEGAAFMALMAEKARL
                     AALLPEGWSRDMTTFLSLSQEVLLSLLSFCTACSLNGVQTRECGHTSRSPLDTLETAI
                     GFHMRDWWQPTKANFFGHLKKPQIIAALNDAGLSGAARDAERMKKGDAAEHAEHHMKD
                     NRWVPGWMCAPHPQTDTTERTDNLADAA"
     gene            3082..3516
                     /gene="psiB"
                     /locus_tag="RHX79_004355"
     CDS             3082..3516
                     /gene="psiB"
                     /locus_tag="RHX79_004355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000845953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugation system SOS inhibitor PsiB"
                     /protein_id="HDV2199451.1"
                     /translation="MKTELTLNVLQTMSAQEYEDIRAAGSDERRELTHAVMRELDAPD
                     NWTMNGEYGSEFGGFFPVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVV
                     QVQRRFAPEAVSHSLALAASLDAQGYSVNDIIHILMAEGGQA"
     gene            3513..4232
                     /locus_tag="RHX79_004356"
     CDS             3513..4232
                     /locus_tag="RHX79_004356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001763821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid SOS inhibition protein A"
                     /protein_id="HDV2199452.1"
                     /translation="MSARSQALVPLSAEQQAAWRAVAETEKRRHQGNTLAEYPYAGAF
                     FRCLNGSRRISLSDLRFFMPSLTAEELRGNRSQWLYAVDVLIETQGEVCLLPLPGDAA
                     EQLFPSVRFRVRERSRHKSALVMQKYSRQQAREAEQKTRAYQALVAQAEIELAFHSPE
                     TVGSWHARWSDRVAEHDLETLFWQWGERFPSLAGMERWQWQDMPFWQVITEAGMAARE
                     AGHAVREMERWMVPNKLREAA"
     gene            4229..4543
                     /locus_tag="RHX79_004357"
     CDS             4229..4543
                     /locus_tag="RHX79_004357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001562885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="theronine dehydrogenase"
                     /protein_id="HDV2199453.1"
                     /translation="MKWRYSLRWKLPYPCPGEHELVSEVVEAGQPAPASVMSRWVAGA
                     GYAVCLDFISDRPVRRWSEERKAAVRRRNLEKRINRHAPLFADELIARELAERPDYFQ
                     GK"
     gene            4752..4913
                     /locus_tag="RHX79_004358"
     CDS             4752..4913
                     /locus_tag="RHX79_004358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004118124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HDV2199454.1"
                     /translation="MKLPGNALIWCVLIVCCTLLIFTHLTRNRLCEVRLKDGYREVTA
                     SLAYESSGK"
     gene            complement(5151..5420)
                     /locus_tag="RHX79_004359"
     CDS             complement(5151..5420)
                     /locus_tag="RHX79_004359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010892540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199455.1"
                     /translation="MKRGLRNGVAPYIPAAFCRDAGSAGHGATEAARPERSLQARGFA
                     SGMEARQGDARKRHCQENNKTDNNQGSSNQSQNRRKKRIIKGKVM"
BASE COUNT         1239 a         1468 c         1737 g         1126 t
ORIGIN      
        1 aaaaaatttt gcgttctgcc caggacaggt gcgtcaggcc gtggcagtga tgccccttgc
       61 ggcgaaggtt ctcaaacagg tgatggtgaa taccggaggg aacaaaaggc aggtccccgc
      121 aaaacgtcaa aaccgcggct cccgaaactc aacagatgat gggggctgaa aacatcaaca
      181 gaaggagata catcatggca gttcgtggca ttaacaaggt cattcttgtc ggtcgtctgg
      241 gaaaagatcc ggaagtccgt tacatcccaa acgggggcgc agtggcaaac ctgcaggtgg
      301 ccacgtcaga aagctggcgt gacaaacaga cgggggagat gcgggagcag acagaatggc
      361 atcgcgtggt gctgttcggc aagctcgcgg aagtggcagg tgaatatctg cgcaagggcg
      421 cgcaggtcta catcgagggg caactccgaa cccgtagctg ggaagataac ggtattaccc
      481 gttacgtcac tgaaatcctt gtgaaaacca cgggcaccat gcagatgctg gggagtgcac
      541 cacagcagaa cgctcagacg caaccggagc ctcagcagaa tggtcagcta cagagtgctg
      601 acgcgacgaa aaaaggtggc gcgaaaacga aaggccgtgg acgtaaggcc gcgcagcccg
      661 agcctcagca gccgtctgaa cccgcgtatg acttcgatga cgacattccg ttctaacgaa
      721 agacagtgac aaccgccccg tccagtgcgg ggcatcaccg gagagatgag gatgagcgaa
      781 tatttcagaa tatttcaggg gttgcctgac ggctccttta cccgcgaaca ggctgaagcc
      841 gttgccgcac agtaccggaa tgtctttatc gaggatgatc agggaacgca ttttcgcctg
      901 gttgtccgca ataacagtgg cctggtctgg cgtacctgga attttgagga cggtgccggg
      961 tactggatga accatgtcat ccggaatttc ggcattctta agtaagagag gtgccggacg
     1021 ggaacgcgtc cggcagacat acaaccatcc cggtcaaagg agaaatatat gtcagttaca
     1081 gagtctaaga caaaaacgga gcgtaaatcc agccgtaaac ctgcaaaaac gcaggaaaca
     1141 gtcctgtctg ccctgctggc gcagacggag gaagtgagcg tgtcgctggc ttcactgatt
     1201 aaatcaccgc tgaatgtgcg cacggtgccg tattccgcag agtccgtcag cgaactggcg
     1261 gagtccatta agggcgttgg cctgttgcag aatctggtcg tgcataccct gcctggtgac
     1321 cgttacggtg tcgccgcagg tggtcgccga ctggcagcac tcaacatgct ggcagagcgt
     1381 ggcatcattc cggctgactg gcctgtacgc gtgaaggtta ttccgcagga gctggcgacg
     1441 gctgcatcaa tgactgaaaa cggtcatcgt cgggatatgc accctgccga acagattgcc
     1501 ggattccgtg cgatggcgca ggaaggcaaa acgcctgcac aaatcggtga tttgctgggc
     1561 tattcgcccc gccacgttca gcgaatgctg aaactggcag accttgcgcc tgtcatcctc
     1621 gatgcgctgg cagaagaccg catcaccaca gagcactgtc aggcgctggc gctggagaac
     1681 gacaccgcgc gtcaggtgca ggtgtttgaa gccgcctgcc agtcaggatg gggcggtaaa
     1741 ccggatgtgc gggttatccg caacctgatt accgaaagtg aagtggcggt ggcggggaac
     1801 agtaaattcc gcttcgtggg ggctgatgcc ttctcgccag acgaactgcg caccgatttg
     1861 ttcagcgacg acgagggtgg ctatgtggac tgcgtggcgc tcgatgccgc cctgctggaa
     1921 aaactccagg ctgtcgcaga gttccttcgg gaagccgaag gctgggaatg gtgcgccgga
     1981 cgcatggagc ctgtcggtga gtgccgtgag gatgccggaa cataccgttg tctgccggag
     2041 ccggaagcgg tgctgacgga ggcagaagaa gaacgcctga acgaactgat ggcacgttac
     2101 gacgcgctgg aaaaccagtg tgaggaatct gacctgctgg aagcagaaat gaagctgatg
     2161 cgctgcatgg cgaaggtcag agcgtggacg ccggagatgc gtgccggagg tggagtggtg
     2221 gtgtcctggc gttatggaaa cgtatgtgtc cagcgtggtg tgcagttacg cagtgaggat
     2281 gatgcggctg acgacgctga ccgcacggaa caggtgcagg aaaaagcgtc agtggaggaa
     2341 atcagtctgc cactgctgac gaaaatgtct tccgaacgca cgctggcagt ccaggcagca
     2401 ctgatgcagc aaccggacaa atccctgaca ctgctggcat ggacgctctg cctgaatgtg
     2461 tttggcagcg gagcgtacag taaaccagca caaatcagcc tggaatgtaa acattattcg
     2521 ctgaccagcg atgcgccatc ggggaaggaa ggtgccgcat tcatggcgct gatggcagaa
     2581 aaagcccgtc ttgctgccct gttaccggag ggatggtcac gggacatgac gacattcctg
     2641 tcactcagtc aggaggtgct gttatccctg ctcagtttct gcaccgcatg cagccttaac
     2701 ggtgtccaga cccgtgagtg tggtcacacg tcacgcagtc cgcttgacac gctggaaacc
     2761 gctatcggat tccacatgcg cgactggtgg cagccgacaa aagcaaactt cttcggacac
     2821 ctgaaaaagc cgcagattat cgcagctctg aatgatgccg gactgtccgg tgccgcacgg
     2881 gatgcagaga ggatgaagaa aggtgatgcg gctgaacatg cagagcacca tatgaaagac
     2941 aaccgctggg tgcctggctg gatgtgtgca ccacatccac agacagatac cactgaacgc
     3001 accgataacc tggctgatgc cgcctgatga acaaccacac cgccccgccg gagacggggc
     3061 ggcagcaagg gagataccgt gatgaaaact gaactgaccc tgaatgtatt acagaccatg
     3121 agcgcacagg aatatgaaga tatccgggct gccggaagtg atgaacgtcg tgagctgaca
     3181 cacgccgtga tgcgggaact ggatgcgccg gacaactgga cgatgaacgg cgagtacggc
     3241 agcgagtttg gcggattttt ccccgtccag gtccgtttca cgcctgccca cgaacgtttt
     3301 cacctggcgt tatgttcacc gggcgatgtc tctcaggtct gggtgctggt tctggtgaat
     3361 gccggtggtg agccgtttgc ggtggttcag gtgcagcggc ggtttgcacc ggaagctgtc
     3421 agccattcac tggcactggc ggcgtcactg gatgcgcagg ggtacagcgt taacgacatc
     3481 attcatatcc tgatggcgga aggaggtcag gcatgagcgc acgatcacag gcactggttc
     3541 ccctcagcgc agagcaacag gccgcatggc gggcggtggc ggagacggaa aaacgccgcc
     3601 atcagggtaa cacgctggcg gaatatccgt atgcgggggc gtttttccgc tgtctgaacg
     3661 gaagccgcag gatttcgctg tctgacctgc gatttttcat gccgtccctg accgcagaag
     3721 aactgcgtgg caaccgttct cagtggctgt atgccgtcga tgtgctgatt gaaacacagg
     3781 gcgaggtctg cctccttccc cttcccggcg atgcagcaga gcagttgttc ccgtcagtgc
     3841 ggttccgtgt cagggaacgc agtcgccata aatccgcact ggtcatgcag aagtacagcc
     3901 gtcagcaggc gagggaggca gagcagaaaa cccgtgcgta ccaggcgctg gttgctcagg
     3961 cagaaatcga actggcgttc cattcaccgg aaacagtcgg aagctggcat gcacgctgga
     4021 gtgaccgggt ggcagagcat gacctggaaa ccctgttctg gcagtggggc gagcgttttc
     4081 cgtcactggc cggaatggaa cgctggcagt ggcaggatat gccattctgg caggtcatca
     4141 cagaggctgg tatggcggca agggaggccg gtcatgccgt ccgtgagatg gagcggtgga
     4201 tggtgccgaa caaactccgg gaggcggcgt gaagtggcgt tactcactgc gctggaaact
     4261 gccttatccc tgtcctggcg agcatgaact ggtttcagaa gtggtggagg cggggcagcc
     4321 tgcaccggca tccgttatgt cacgctgggt tgccggagca gggtatgcgg tctgtctgga
     4381 ttttatttct gaccgcccgg tgcgccgctg gagcgaagaa cgtaaggctg cggtacggcg
     4441 gcggaatctg gagaaacgta tcaacaggca tgcaccactg tttgcggatg aactgattgc
     4501 ccgtgaactg gctgaacgac cggattattt tcagggaaag tgagtgtggt cagtgcgcag
     4561 gtatatgggc tatgatgtgc ccggcgcttg aggctttctg cctcatgacg tgaaggtggt
     4621 ttgttaccgt gttgtgtggc agaaggcaga aagccccgta gttaattttt cattaaccca
     4681 cgaggccccc tgtatgtctg atcaacaaca gtatggcctc ttaccgtgct taatgcaagg
     4741 aggagtaaac catgaaacta ccgggaaacg cccttatctg gtgcgtatta atcgtgtgct
     4801 gcacgttgtt aatattcaca cacctgaccc ggaatcgtct gtgcgaagtc cggctgaagg
     4861 acggatacag ggaggttacg gcaagtttgg cttacgaatc cagcggtaag tagcaacctg
     4921 gaggcgggcg caggcccgcc ttttcagggc tgatgctggt ctgactgcac tgaagcgcct
     4981 ttataaaggg gctgctggtt cgccggtggc ccctttctcc ttgctggcat tgtgcgggca
     5041 tgaacaacca gactgccagg aaggccgttt cccttcggga acggggatga acgcgcgcct
     5101 gcggcgcccg ttcttttccc ccgccttctc tgtttatgac ctgtcagaaa tcacatcacc
     5161 ttccctttga ttattctctt tttcctcctg ttctgactct gattactgct gccctgatta
     5221 ttgtctgttt tgttgttctc ctggcagtgt cttttccggg cgtccccctg gcgggcttcc
     5281 atccctgacg cgaaaccccg ggcttgcagc gaccgttccg gtcgcgccgc ctctgtcgcg
     5341 ccgtggcctg cgctccctgc atcccggcaa aaggccgccg ggatgtaagg ggcaacgccg
     5401 tttcgcaaac cgcgcttcac gtcgttgcgg cgggtccctg cccgttgttc tgtccggtgc
     5461 cattcacctg tttaagcccc tgtcgccggg ggcatagaca gccacaacct gccgcactga
     5521 ctgtccaggg taaatgaaca gcccacaaaa ttttttacct aaaacccggt
//
LOCUS       DAPGWB010000226         5545 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.228, whole genome shotgun sequence.
ACCESSION   DAPGWB010000226 DAPGWB010000000
VERSION     DAPGWB010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5545
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.228"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..3089)
                     /gene="rhsD"
                     /locus_tag="RHX79_004360"
     CDS             complement(<1..3089)
                     /gene="rhsD"
                     /locus_tag="RHX79_004360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhs element protein RhsD"
                     /protein_id="HDV2199456.1"
                     /translation="MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGMT
                     SGNPVNPLLGAKVLPGETDLALPGPLPFILSRTYSSYRTRTPAPVGVFGPGWKAPSDI
                     RLQLRDDALVLNDNGGRSIHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWG
                     ALPPDIRLSPHLYLATNSAQGPWWILGWSERVPGAEDVLPAPLPPYRELTGLADRFGR
                     TLAYRREAAGDLAGEITGVTDGAGREFRLVLTTQAQRAEEARTSSLSSSDSSRPLSAS
                     PFPDTLPGTEYGPDRGIRLSAVWLMHDPAYPESLPGAPLARYTYTEAGELLAVYDRSN
                     TQVRAFTYDAQHPGRMVAHRYAGRPEMRYRYDDTGRVVEQLNPAGLSYRYQYEQDRIT
                     VTDSLNRREVLHTEGGAGLKRVVKKELADGSVTHSGYDAAGRLTAQTDAAGRRTEYGL
                     NVVSGDITDITTPDGRETKFYYNDGNQLTAVVSPDGLESRREYDEPGRLVSETSRSGE
                     TVRYRYDDAHSELPATTTDATGSTRQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQMTA
                     VHREEGISLYRHYDNRGRLTSVKDAQGRETQYEYNAAGDLTAVITPDGNRSETQYDAW
                     GKAVSTTQGGLTRSMEYDAAGRVISLTNENGSHSDFSYDALDRLVQQGGFDGRTQRYH
                     YDLTGKLTQSEDEGLVTLWYYDESDRITHRTVNGEPAEQWQYDDHGWLTDISHLSEGH
                     RVAVHYGYDDKGRLTGERQTVENPETGELLWQHETTHAYNEQGLANRVTPDSLPPVEW
                     LTYGSGYLAGMKLGDTPLLEYTRDRMHRETVRSFGSMAGSNAAYKLTSTYTPAGQLQS
                     QHLNSLVYDRDYGWNDNGDLVRISGPRQTREYGYSATGRLESVRTLAPDLDIRIPYAT
                     DPAGNRLPDPELHPDSTLTAWPDNRIAEDAHYVYHYDEYGRLTEKTDLIPAGVIRTDD
                     ERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLS
                     "
     gene            complement(3156..5264)
                     /locus_tag="RHX79_004361"
                     /pseudo
     CDS             complement(3156..5264)
                     /locus_tag="RHX79_004361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310087.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
BASE COUNT          994 a         1768 c         1539 g         1244 t
ORIGIN      
        1 gacagcgaca tccaccccgt caggtcacgc tcccgccgcc atacccgttt cgccattcgc
       61 cgtcccagcg ggtcgtagag gtagcggctc tcgaccagtg gctcgccatg ctgtatccgc
      121 gtgtagaaca ccagacggtg ctggctgtcg tagtggtagt ggtgggtccg ctcgtcgtcc
      181 gtccggataa cacccgccgg gataaggtcc gtcttctccg tcagtctgcc gtattcatca
      241 tagtggtaaa catagtgcgc atcctctgcg atgcggttat ccggccacgc cgtgagggta
      301 ctgtccgggt gcagctccgg gtccggcagg cggtttcccg ccgggtcggt ggcatacggg
      361 atgcggatgt ccaggtccgg tgcgagggta cgcacgctct ccagcctgcc cgtggcgctg
      421 tagccgtatt cccgcgtctg tcgcgggccg ctgatgcgca ccaggtcgcc gttgtcattc
      481 cacccgtagt cacggtcata caccaggctg ttcaggtgct ggctctgtaa ctggcctgcg
      541 ggggtgtatg tgctggtcag tttatatgcg gcattactgc ctgccatgct gccaaagctg
      601 cgcaccgtct cacggtgcat gcggtcgcgc gtgtactcca gcagcggcgt gtcgccaagc
      661 ttcatgcccg ccagataacc gctgccgtag gtcagccact ccaccggcgg caggctgtcc
      721 ggcgtgacgc ggtttgccag cccctgttcg ttgtaggcgt gtgttgtctc atgctgccac
      781 agcagttccc ccgtctccgg gttctccacc gtctgccgtt cgccggtcag gcggccctta
      841 tcgtcgtagc cgtagtggac agcgacacgg tggccttcgc tcaggtggct gatgtctgtc
      901 agccagccgt ggtcatcata ctgccactgc tctgccggtt cgccgttcac cgtgcggtga
      961 gtgatacggt ccgattcatc gtagtaccag agggtgacaa gcccctcatc ttcactctgc
     1021 gtgagttttc cggtcaggtc ataatgataa cgttgcgtcc gcccgtcaaa gccgccctgc
     1081 tgtaccaacc ggtccagcgc atcgtagctg aagtcgctgt ggctgccgtt ctcgttagtc
     1141 agactgatga cacgtccggc agcatcgtac tccatactgc gcgtcagccc gccctgcgtg
     1201 gtgctgaccg cctttcccca cgcatcgtac tgtgtctcgc tccggttgcc gtccggggtg
     1261 ataacggcag tcaggtcgcc tgcggcgttg tactcatact gcgtttcacg gccctgtgcg
     1321 tctttcaccg aggttaaccg gccacggttg tcatagtggc ggtaaaggct gataccttcc
     1381 tcgcggtgaa ccgccgtcat ctggccgaag cggtcgtatt catagcgggt ctggtagccc
     1441 gagcagtcag tgaacgccag caactgcccg tagcggctcc acgtcatctg ccgggtgctg
     1501 cccgtcgcat ccgttgtcgt cgccggtaac tcactgtgcg cgtcatcgta gcggtagcgt
     1561 actgtctccc cgctgcgcga tgtctccgat accagcctgc ccggttcatc atattcccgg
     1621 cggctctcca gcccgtccgg ggacaccacc gccgtcagct ggttcccgtc gttatagtaa
     1681 aatttcgtct cccgcccgtc cggtgtggtg atgtccgtga tatcgccgga caccacattc
     1741 agaccgtact ctgtccgccg tcccgccgcg tccgtctgcg ccgtgagcct tcctgccgcg
     1801 tcatacccgc tgtgcgtgac gctgccgtcc gccagttctt ttttcaccac ccgcttcagc
     1861 ccggccccgc cttctgtatg cagcacctca cgccggttca ggctgtccgt gacggtgatg
     1921 cggtcctgct catactggta gcggtaactc aggcctgccg ggttcagctg ctccaccacc
     1981 cgcccggtat cgtcgtagcg gtagcgcatc tccggccttc ccgcgtaacg gtgcgccacc
     2041 atccggcccg ggtgctgcgc gtcatacgtg aaagcgcgca cctgcgtatt gctgcggtca
     2101 tataccgcca gcagttcacc ggcttccgta tacgtgtacc gcgccagtgg cgcaccgggc
     2161 aggctttccg ggtatgccgg gtcgtgcatc agccacaccg ccgaaagacg gatgcccctg
     2221 tcggggccgt attcggtacc gggcagtgtg tcggggaacg gtgaggctga gagagggcgg
     2281 gaactgtcag aagaagatag cgaagaggtg cgggcctctt ccgcacgctg cgcctgcgtg
     2341 gtcagcacca gacggaactc ccgcccggca ccgtccgtca cgccggtgat ttccccggcc
     2401 aggtcaccgg cggcctcacg ccggtacgcc agcgtccgcc cgaagcggtc cgccagcccc
     2461 gtcagctccc ggtacggcgg cagcggcgct ggcagcacgt cctcagcacc cggcacccgc
     2521 tctgaccacc ccagtatcca ccacggcccc tgtgcgctgt tggtcgccag gtaaagatgc
     2581 gggcttaacc ggatatccgg cggcagcgcc ccccacagcc gcgccagcgt gtggccgtcc
     2641 ggctgcgctg ccttaccacc gcgcaccagc cacattgact cgctgcggct gtacaccgcc
     2701 tcccccggca gcagcggctc aaagtgaatg ctccgcccgc cgttgtcgtt gagtaccagt
     2761 gcatcatcgc gtagctgtaa gcggatatca gaaggcgctt tccagccggg gccaaacact
     2821 cccaccggcg cgggtgtcct ggtccggtag ctgctgtagg tgcgggagag aatgaacggc
     2881 agcgggccgg gcagcgcaag gtccgtctcg ccgggcagca ccttcgcccc cagcagcgga
     2941 tttaccgggt tgcccgaagt catcccgccc ggacacaccg agcacgccac gccggtgggc
     3001 gcgccaattc ttacacctgc cgaaccctgg acaataggac cgccatactg agtcatatct
     3061 ccctgacgcg ccgctggttt tccgctcatg attcaattcc ttcttctgtt tatttttaat
     3121 gcttgtttgt tactgaatac cgaacaggta cgggatcagt actctctcat atccggcgta
     3181 tcctgctttt catcaggggt cttcggtggg gatttcgagg ctgcacagtt ccagttaatc
     3241 aacagtgagt caccattaac ctgctcctta ccctgcaaat gaatttttgt gccgttgaga
     3301 aaaatttgtc cgtccttcgt cagcaccagc cttgccttac cacagcagag ctccagatgc
     3361 tcaccggcgg agtaaatcgc ggtctgcccg gtatcatcct ttttcgtttt accaacggtg
     3421 aaggtaacgt tatttccgac tttgacgtca taacccagcc cgaccctcaa cgatttatgc
     3481 aaaccgatct gcgaggactg catcagagcc accgaagtgt tcataatgcc acctaccgtc
     3541 gtctggtacg ccacgcccac ggtcagcgca cgaacaagtc caatcgtttc cacctgaaca
     3601 gaacccacgt taatgatctg gttactgccc accgtctcta tctggttaac gcccaccgtc
     3661 tgtatctgat tgttggtaac cgcaatcatc tgattgttgc caatggtctc agcatggttg
     3721 tttatcacat ccgtggtgcg gttattcagc acctcggtgt tcatgttctt ctgcgcgtgg
     3781 atgtagacct gttctttccc tgtcgcatcg tcaaacttca gttcattaaa cccgctgccc
     3841 ttataggttt tcgaacgaat ggtcatctgc gtcttcgtcc ccggcaggct gccgggtgtg
     3901 cggttttcct ggtggtaggt acgccccata ataatcggct ggtccggatc gccgttgagg
     3961 aagtccacaa tcacctcctg acccacacgc ggtatcgcca ggtggccaaa accggtgcct
     4021 gctcacgcct gtgccacacg gatccagcac gaactgtctt ggtctgccgg gttataacgg
     4081 tcccagttga acttcacccg cacgcgacca tgttcgtcgc agaagatttc ctcgcctgcc
     4141 ggtcctgtca cgacagcgct ctgcgggccg tcgaccagcg gtttcagcaa cggctgtggt
     4201 cgccatgttc tgtctgccgg gatcaccgca aaatggttct ccagcgccgt ccccgctccc
     4261 tgccgtcctg gcaccgcctg tggctgttcg ccgtgcagtt cacttgccac cacctgccat
     4321 tcccggttca ggttcgcctg cggatgcccc gtcagcacaa ttcgtcgtcc cggccatatc
     4381 tccggcgagc gactcattcc ccgcgcggtt tctgcattgt ttcgccagcc gtccatctgc
     4441 cagcgggcaa agttctgccc gtgggcaccc ttgaaacgtc cggggtagtc atacacttca
     4501 tactgcgtgc gctggtaatc ctggtactgg ccttcctgat caaaacgccc tgcccagccg
     4561 ggtcgtttaa aggtgtagtc cttggtcacc acggaagaag ggcggatttg tgcgctgtag
     4621 cggaactggc tgatgcagag ggtgctcacc tcggtacggg tgttcggatt ccaggggatc
     4681 tcaaaggact ccggcagata acgcacggtg tcgcacagga ccaggctctg gtcggtactt
     4741 ttttgcgcgt gctcctcata aaagaagatg ccttcctccg ccgccatccg gcacaggaaa
     4801 tcgtaatcgg tttcgccgta ctggacacaa aactcacggg aaggatgcgg ctcgctgaac
     4861 agcggactcc actcggtcac accgttttcc ttcaggatcg tagcgaggat gctttcgatg
     4921 tcctcattct ggaagatacg gaagttctgg cgcagccctg tgcgccacag cggcgggcac
     4981 accttcatgc tgtacagcat ctggtttttg tcgttctccc ccagttcaaa ccaggtcacc
     5041 acacctttca cccggcgctg tacgtcatcg ccctgccata ccgtcaggta ggccattttg
     5101 tccagcacct gcgcaaattc aagggaaaga aactgctgac tgaccagaga aaggtcgagg
     5161 gaaaaaagtg aagagagtga ctgggtgaga tgaaaggaaa ccaccgcaaa cgcgtccggt
     5221 ggcaggccgt ccacttcaag tgtgaaacgt aatccggttg acatagcaac ctccgtgaaa
     5281 atgaataata atccgcacat attgcatgta caacatgtcg ggcggatgag ataagcgagt
     5341 cgacatctgg cgttaccggg gaatatcaga aaaatgtcat ggttatgtga tgatttagtc
     5401 tgggatttta cttcagagaa acgggtgtct gtttagtcaa caaaataatc acaaacgcaa
     5461 cggatgggtt ctcgacgtta ttcacgacag gctcgtacat tacagcgagt aataaaaaac
     5521 ctgatatgca aagtcaaacc aatat
//
LOCUS       DAPGWB010000227         5535 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.229, whole genome shotgun sequence.
ACCESSION   DAPGWB010000227 DAPGWB010000000
VERSION     DAPGWB010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5535
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.229"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            126..1484
                     /gene="mltD"
                     /locus_tag="RHX79_004362"
     CDS             126..1484
                     /gene="mltD"
                     /locus_tag="RHX79_004362"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase D"
                     /protein_id="HDV2199457.1"
                     /translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA
                     RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM
                     YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY
                     DARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF
                     WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD
                     MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVAD
                     NMPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQR
                     LANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMP
                     DS"
     gene            complement(1532..2302)
                     /locus_tag="RHX79_004363"
     CDS             complement(1532..2302)
                     /locus_tag="RHX79_004363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDV2199458.1"
                     /translation="MTTQSHHDHVEKQFSSQASEYLTSTVHASGRDLQRLAVRLADYP
                     DTSVLDMGCGAGHASFVAAQNVSAVVAYDLSAQMLDVVAQAAEARQLKNITTRQGYAE
                     SLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRMIVMDVMSPGHPVRDIWL
                     QTVEALRDTSHVRNYASGEWLRLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVD
                     AIRIYQQSASTEVRTYFALQNDGSFTSDIIMVEAHKAA"
     gene            complement(2380..3180)
                     /locus_tag="RHX79_004364"
     CDS             complement(2380..3180)
                     /locus_tag="RHX79_004364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HDV2199459.1"
                     /translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERI
                     RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV
                     LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF
                     SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTD
                     DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK"
     gene            3421..4335
                     /locus_tag="RHX79_004365"
     CDS             3421..4335
                     /locus_tag="RHX79_004365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2199460.1"
                     /translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK
                     LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMASAESEIMETRNTPRGLLRIDAATP
                     VVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLF
                     NSYRKIIASPDYISRYGKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGL
                     SSNSGETLKQLCLSGNGIACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDR
                     AVSTRIRAFIDFLSEHVKTAPGGAVREA"
     gene            complement(4332..5135)
                     /gene="dkgB"
                     /locus_tag="RHX79_004366"
     CDS             complement(4332..5135)
                     /gene="dkgB"
                     /locus_tag="RHX79_004366"
                     /EC_number="1.1.1.346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgB"
                     /protein_id="HDV2199461.1"
                     /translation="MAIPAFGLGTFRLKDDVVISSVITALELGYRAIDTAQIYDNEAA
                     VGQAIAESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPN
                     DEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQ
                     NRKVVAWAKQHGIHITSYMTLAYGKALKDEVIARIAAIHNATPAQVILAWAMGEGYSV
                     IPSSTKRKNLESNLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD"
     gene            complement(5298..5374)
                     /locus_tag="RHX79_004367"
     tRNA            complement(5298..5374)
                     /locus_tag="RHX79_004367"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5338..5340),aa:Asp,seq:gtc)
     gene            complement(5429..>5535)
                     /gene="rrf"
                     /locus_tag="RHX79_004368"
     rRNA            complement(5429..>5535)
                     /gene="rrf"
                     /locus_tag="RHX79_004368"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         1439 a         1352 c         1378 g         1366 t
ORIGIN      
        1 caacaacctg aagaacgttt tgcatggtta aggtcaaaga aagataggtt ctgataaaac
       61 tttcttgtca tcggctccgt tcgccgttat gatcggtcgt cttttaagca actattgaca
      121 cacacatgaa ggcaaaagcg atattactcg cctctgtcct gctcgtgggt tgccagagta
      181 ccggcaacgt tcaacagcac gcacagagcc tttctgcagc tggtcaaggg gaagcagcaa
      241 agtttacaag tcaggcacga tggatggacg atgggacgtc tatcgcgcca gatggtgact
      301 tgtgggcttt cattggcgac gagctaaaga tgggaattcc ggaaaatgac cggattcgcg
      361 aacagaaaca gaaatattta cgcaataaga gctatctcca cgatgtaact ttacgggcag
      421 agccgtatat gtactggata gccgggcaag ttaaaaaacg taacatgcct atggaactgg
      481 tactactacc catagtggag agcgcttttg atcctcacgc aacgtctggc gccaatgccg
      541 caggcatctg gcagatcatt ccgagcacgg ggcgcaatta tggtttgaaa cagacccgca
      601 attatgacgc gcgtcgcgat gttgttgctt caacaactgc cgcgctgaat atgatgcagc
      661 gtctgaacaa aatgtttgac ggcgactggc ttctgaccgt agcggcttat aacagcggcg
      721 aaggtcgggt catgaaggca attaaaacga acaaagcgcg tgggaaatcc acggacttct
      781 ggtcgttacc gttgccgcag gaaacgaagc agtacgtgcc taaaatgctg gcattgagtg
      841 atattctcaa aaacagcaag cgttatggcg tacgtctgcc aacgaccgat gaaagccgtg
      901 ctctggcgcg tgtgcacctg agcagcccgg ttgaaatggc gaaggttgca gatatggcgg
      961 ggatttccgt cagcaagctg aagacattca acgctggcgt gaaaggctcc acgctgggcg
     1021 caagtggtcc gcaatacgtg atggtgccaa agaagcatgc agatcaactg cgtgaatctc
     1081 tcgcttcagg cgaaattgct gctgtacagt cgacgctggt tgccgacaat atgccgctta
     1141 acagccgagt ttacaccgta cgctctggcg acacgctttc aagtatcgct tcacgtctcg
     1201 gcgtaagcac caaagatttg cagcagtgga acaaactgcg cggatctaag ctgaagccag
     1261 gccaaagttt gacgattggt gcaggcagta gcgcacagcg actggcaaac aacagcgata
     1321 gcattacgta tcgtgtgcgc aaaggcgatt cgctttcaag cattgctaaa cgccacggcg
     1381 tgaacatcaa agatgtgatg cgctggaaca gcgacactgc gaatctgcaa ccaggcgata
     1441 agctgacgtt gtttgtgaaa aacaacaaca tgccagattc ctgacaaacc agataataaa
     1501 aaggcaccga ttcccccggt gcctttttta tttatgctgc tttatgtgct tctaccatga
     1561 tgatatcact ggtgaaagag ccatcattct gcaaggcaaa atacgttctc acctctgtcg
     1621 atgcgctctg ttggtaaatg cgaatagcgt ctactaacgc ttctggcgta cgcattctcg
     1681 cgacccatga agaaaattcc agcggtaact tatctgtaat taaattatca actatcagat
     1741 tggcttcatt gattaacctc aaccactcac cgctggcgta gtttcgtacg tgagaggtat
     1801 cgcgtaatgc ttctaccgtc tgtaaccaga tgtcgcgcac tggatgaccc ggagacatta
     1861 cgtccatcac aatcatccta ccgccaggtt tcaatatccg gttcacttca cgcagtgctg
     1921 caccaacatc atgccagtga tgggcagaat aacggctgat aacaatatca aatgcgttat
     1981 cggcaaatgg cagactttcg gcataaccct ggcgggtggt gatatttttc agttgccggg
     2041 cttcggcagc ttgtgccacg acatccagca tttgggcaga taagtcatac gccaccaccg
     2101 cgctcacgtt ctgcgcagcg acaaagctgg catgccctgc tccgcagccc atatcaagta
     2161 cacttgtatc aggataatca gccagacgca ccgccaggcg ctgtaaatct cgcccggatg
     2221 catgtacggt actggttaaa tactcactgg cctgcgagct aaactgcttt tctacgtggt
     2281 catggtggga ttgtgttgtc attgcgctgt ccttttgttg tttgagtata aaagggcagc
     2341 gccaaacgtt ggtctgccct gtggcagacc tgacatacct tatttatcag gcttgccggg
     2401 actgaattca acgagtagcg gattgtgatc ggaagcgcgc gtaaccagta cagaagcttc
     2461 gctgacgttc agaccacggt agaaaacaaa atcgagcgga cggccaaacg cccgacggcg
     2521 ctgatcgtcg gtaaaacgca cctggcgcag cgacatttcc cgcgcaaagc gatataacgc
     2581 gttcatcctt ctacggctcc aggcattgaa atctcctgcc ataatgaccg ggccgctgtg
     2641 gtgagctatc tgatcaccaa taggaagtaa ctgcttacta tagacatcca cgcccagact
     2701 gaagttgacg gcgtgtatat taaccaccat caacaggcgg gtgtcaggta atggatagac
     2761 cgtcaccagt gccgacttcg ccagacgcaa aatgggttct cgttcacgta acgggcagca
     2821 atacactgga tgcgccgccg aaagggtcat tacgccagaa ggatgttgtg gcagtacgaa
     2881 agcgggtacc tgatcggcgg caagatagtt agcggtcgca aactgtacta actctggcgt
     2941 tgtctgcgct tcctgcaata acaccagatg tgcatctttg ccgtagttct ttaataccga
     3001 caaccattca gcgcgttgct gtttgtatat gttccacacc aggatccgaa tacgctcttc
     3061 ggtacttaac ggttctccgg gtggtaatgc ctggccgatg ctcgcaaaag accccggcgg
     3121 taagatcctt tccgcaggtt gtccggcaac atagcgcatg gcataggtgt tttttcgcac
     3181 ttttgacttt gaaacctcta ttacgtcaac ccttccgcac tcgggagggt tctactgtta
     3241 tagggatttt agctcactct ttcaacgagc aattgtatat tgttatgtaa gcaagtgctt
     3301 acaccggtca gaattttgct cattatggag aacattaaat cgcatgacat atcacgcatc
     3361 ctgatggttt aatgacaaat aaattcaaaa tatctcttct attttgcaac aggagcaaaa
     3421 atgaaagcca cgtcggaaga actcgccatt tttgtttcgg tcgtcgaaag cggcagcttt
     3481 agccgggcag cggaacaatt agggcaagca aactcagcgg taagccgggc ggtgaaaaag
     3541 ctggagatga aacttggcgt tagcctgctt aatcggacca cgcgacaact tagcctgacg
     3601 gaagaaggcg agcgttattt tcgtcgcgta cagtcaattt tgcaggagat ggcatcggca
     3661 gaatcagaaa ttatggagac gcgtaataca ccgcgtggac tgttacggat cgatgccgca
     3721 actccagtgg tgctgcactt tctgatgccg ttaattaagc ctttccgtga acgctatccg
     3781 gaagtcactt tatcgctagt ctcctccgaa acgattatta atttgatcga aagaaaagtg
     3841 gatgtcgcga tacgcgctgg tacgttaacg gattccagct tacgtgccag gccgttattt
     3901 aacagttatc gaaaaattat cgcctccccc gattatattt cccgctacgg gaagccagaa
     3961 acgatcgacg atttaaagca acatatttgc ctgggattca ctgaacccgc ttccctcaat
     4021 acctggccga tagcccgtag cgatggacaa ttacatgagg tgaagtacgg tttgtcatcc
     4081 aatagtgggg aaacactgaa acagctttgc ctgagtggca acgggattgc gtgtttgtcc
     4141 gactacatga tcgacaaaga aatcgctcgc ggagaattgg tggagttaat ggcagataaa
     4201 gtgttgccag tggaaatgcc attcagtgcc gtctattaca gcgaccgtgc ggtaagtacg
     4261 cgcatccggg cttttatcga tttccttagc gagcatgtaa aaacagctcc cggaggagct
     4321 gtcagagagg cttaatccca ttcaggagcc agaccttccg ggctaaccag gcggtcgttg
     4381 caatccagtg cggcgatcgc ttttttatct tcggcatcaa gctgtaaatt ttgtgcctta
     4441 agattacttt ccaggttttt acgtttagta gaagaaggaa ttactgagta accttccccc
     4501 atagcccacg ccagaatcac ttgtgccgga gtcgcattgt gtatagctgc gatacgagca
     4561 ataacctcat ctttcagggc cttaccatac gccagcgtca tataggaagt aatatggatg
     4621 ccgtgctgtt tagcccaggc aaccacttta cggttttgca gataaggaga gagttcaatc
     4681 tggttagtag cgatgttttc agcaccaaca gcagcaatcg ctttttccat caacgggatc
     4741 gtgaagttgg aaataccgat ctcacgcgtc agcccttgtt ttttggcttc cagcagcgcc
     4801 tgcataaact cttcaacaga gacttcatcg tttggtgacg gccagtggat tagcgtcaga
     4861 tcaacataat cggtacgcaa tttttgcagg ctctctttca gacttgggat caatttgtct
     4921 ttgctgagat tttcaatcca gattttagtg gtgatgtaga gttcatgacg tggcacgcca
     4981 ctttctgcaa tcgcctgacc tactgcggct tcgttatcat agatttgtgc ggtatcaatt
     5041 gcgcgataac caagttcaag cgccgttatc acagatgaaa taacaacgtc gtctttcaga
     5101 cggaaagtac ctaaaccaaa tgcagggata gccataatat gcctctttta atgctatttt
     5161 cgttaactga ggtgattatg ggcttcagac tgttgaggaa aaagagcgta aaatgcagag
     5221 gatttttgcg attctggcaa taatagatat acagacgaaa aaaaacctcg agcgttaact
     5281 cgaggcttct taataagtgg cggaacggac gggactcgaa cccgcgaccc cctgcgtgac
     5341 aggcaggtat tctaaccgac tgaactaccg ctccaccgaa ttcttttaca accaccggtt
     5401 ttatgaccgg cttactgctt aatttgatgc ctggcagttc cctactctcg catggggaga
     5461 ccccacacta ccatcggcgc tacggcgttt cacttctgag ttcggcatgg ggtcaggtgg
     5521 gaccaccgcg ctacg
//
LOCUS       DAPGWB010000228         5509 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.230, whole genome shotgun sequence.
ACCESSION   DAPGWB010000228 DAPGWB010000000
VERSION     DAPGWB010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5509
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.230"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            210..452
                     /locus_tag="RHX79_004369"
                     /pseudo
     CDS             210..452
                     /locus_tag="RHX79_004369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415892.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            495..653
                     /locus_tag="RHX79_004370"
                     /pseudo
     CDS             495..653
                     /locus_tag="RHX79_004370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611134.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            803..1801
                     /locus_tag="RHX79_004371"
     CDS             803..1801
                     /locus_tag="RHX79_004371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005227439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV2199462.1"
                     /translation="MKKILCALGLMFTAVSSALATTYPLTIENCGYQETFTRPPERVV
                     ALGQNTVEILLLLGLQKQVVASAFWPTSVLPQLAEQNAKIKTLTVEIPSLESVLAQNP
                     DFVPAQLPLLLGPESKVARREDLATVGVNSYVSPGMCATKKATGDMYGSRQKLWDMTW
                     LYQEISDFSRIFNVEDRGQALIADFKKREADLRQEFGKSKKDLSFVFWFSSASPSADA
                     YVGGKNSASGFIASVLGGHNAITSETEWPTVSWESIIAANPDVIVVASLDRNRWALDK
                     AEEKIKFLKSDPAVSQLEAVKKGHIVVMDGQAMNPTIRTLYGAEQVGEQLRKMGLN"
     gene            1801..2838
                     /locus_tag="RHX79_004372"
     CDS             1801..2838
                     /locus_tag="RHX79_004372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005227440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDV2199463.1"
                     /translation="MSVAAIETRRSILLTGWCVLAAIVLALVIAVGVSVGELAIPLQN
                     VFYAISNRTGLTAEPLNRIYESVIWDFRLSRALVAACCGAGLAICGVVLQSLLKNALA
                     EPYVLGVSAGASTGAVSIVVLGLGAGAISLSAGAFAGAFAAFAFVALLTNGARGGNER
                     TILAGVAASQLFNAITAYTISTSASAQQARDVMFWLLGSFSGVRWPEFQLVIVVVLAG
                     LAVCLWYARALDAFTFGDDAAASLGIAVPRVRLILFTTAALITATIVSMAGSIGFVGL
                     VVPHVMRFFFGPLHRTLLIASALAGAILMVLADIASRLLIAPQSLPVGVVTALVGVPF
                     FAVIIYRSRNK"
     gene            2838..3599
                     /locus_tag="RHX79_004373"
     CDS             2838..3599
                     /locus_tag="RHX79_004373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000020503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV2199464.1"
                     /translation="MSICAENITWKAGKKVIVNNVSLRVPRGETVGLLGPNGCGKSSL
                     LRVLAGLRRPDAGRVTLDGQDIARMAKKQLARRVAYVEQHGMTEANMRVRDVVRLGRI
                     PHHSPFSNWSAQDDEAIAAALQRVAMLEKSEQGWLSLSGGERQRVHIARALAQSPSEI
                     LLDEPTNHLDIHHQMQLMQLISELPVTSIVAIHDLNHAAMFCDSLIVMQQGQILASGT
                     PEEILSEALLWDVFRVKTKIEISPYHGKKHIHFIV"
     gene            3656..4843
                     /locus_tag="RHX79_004374"
     CDS             3656..4843
                     /locus_tag="RHX79_004374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005227443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2199465.1"
                     /translation="MLLGSQFVFNIGFYAVVPFLALFLRDDMLLSGGLIGLILGLRTF
                     SQQGMFILGGTLADRYGAKAIILAGCVVRVAGFLLLACGASLWPIILGACLTGVGGAL
                     FSPSIEALLARAGTHSQANGKRSRAEWFALFAVCGELGAVIGPVAGGVLSGIGFRHIA
                     LAGAGIFLLALAVLFFGLPADGHTTTTRRRVPWWTPLRQPRFVAFILAYSSWLLSYNQ
                     LYLALPVEIQRSGGREQDLAPLFMLASLLIITLQLPLARFARRMGAVRILPVGFLLLS
                     ASFASVALFAAAPPAESWLRLMPAAGFVTLLTLGQMLLVPAAKDLIPLFAEESTLGAH
                     YGALATAGGCAVLAGNLLLGHLLDQALIPSPQAVYPWLLLALFPLCSAVALRAICRPL
                     AAT"
     gene            5187..>5509
                     /locus_tag="RHX79_004375"
     CDS             5187..>5509
                     /locus_tag="RHX79_004375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_031587700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1380 family transposase"
                     /protein_id="HDV2199466.1"
                     /translation="MINKIDFKAKNLTSNAGLFLLLENAKSNGIFDFIENDLVFDNDS
                     TNKIKMNHIKTMLCGHFIGIDKLERLKLLQNDPLVNEFDISVKEPETVSRFLGNFNFK
                     TTQMF"
BASE COUNT         1166 a         1531 c         1540 g         1272 t
ORIGIN      
        1 gaacttaatc aagttatttc attagcaatg attacataaa ataaatacag tgtcgttatt
       61 atgaaattat ttcacggcac ttataaaaaa acagtaccaa taatcaaacc tggtgagttc
      121 gcaatgtctg gcaataacgt ttttgatggg ttgttttcca gcccggagcg cgatattgcc
      181 accagtcaca gaaacaccga gaacaccaga tttcagcggt cgctgaattt gaacgagatc
      241 ttttacttga acgaacttat tcagggatag caagagcacg ggatgcagga aaacgttttg
      301 gtcgcccacc ggtattaaat gaagaacaaa aacagaaggt actcgaacgc attaagtctg
      361 gggcaagtat aagtgctatt gccagggaat tccgaaccac acggcaaaca attctgagag
      421 ttagagcgaa acagcaaact gttactgtat agaaaatagt cttagcgtgg gattccgttt
      481 tccaagcgga ccccaaggaa gactacatcg cgttcatgcc gaaaccgaat gtaagaacgg
      541 cattgcataa tcttgcagtg gcgatcgaac attacaatga aaaccatccg cacagtgcgt
      601 tgggttatcg ctctccgcga gaatatcgac gtcagtgggt aacgttaact taagatacaa
      661 cccctgtctg gaaataaggg ggcaagaaca cattgacact gtaaatatgg cattatataa
      721 aactccgccc caataatgag tttcatttgc attactccca tttgctggtc atccactcgc
      781 ctgtttacaa ggatagcgtt taatgaagaa gatcctttgc gcgttaggct tgatgttcac
      841 cgccgtcagt tccgcgctgg caacaaccta ccccctgacg attgaaaact gcggctatca
      901 ggagaccttc acccggccgc cggagcgcgt ggtcgcgctg gggcaaaata cggtcgaaat
      961 tctgctgctg ctcgggctgc aaaagcaggt ggtcgccagc gccttctggc cgaccagcgt
     1021 tttaccgcag ctggctgagc aaaacgcgaa gattaaaacc ttgacggtgg aaattccgag
     1081 cctggaatcg gtgctggcgc aaaatcctga tttcgttccc gcccagttgc cgctgctgct
     1141 gggtccggaa agcaaagtcg ccaggcgtga agatctcgcc accgtcggcg tgaacagcta
     1201 cgtctcaccg gggatgtgcg ccaccaaaaa ggccaccggc gatatgtacg gcagccggca
     1261 aaagctgtgg gatatgacct ggctgtatca ggaaattagc gatttttccc gcattttcaa
     1321 cgtcgaagat cgtggtcagg cgctgattgc cgatttcaaa aaacgtgaag ccgacctgcg
     1381 ccaggagttt ggtaaaagca aaaaggatct ctccttcgtc ttctggttct ccagcgcctc
     1441 accttcggcc gatgcctatg tcggcggcaa aaacagcgcc tccggattta tcgccagcgt
     1501 gctgggcgga cataatgcga ttacctcaga aaccgagtgg cccacggtga gctgggagag
     1561 cattattgcc gccaacccgg atgtgatcgt ggtcgccagc ctggatcgta accgctgggc
     1621 gctggataag gccgaggaaa agatcaaatt cctcaaaagc gatcccgccg tcagccagct
     1681 ggaggcggtg aaaaaaggcc atatcgtggt catggacggt caggcgatga atccgaccat
     1741 tcgcacgctt tacggcgcgg agcaggtggg cgagcagctg agaaaaatgg ggctgaactg
     1801 atgagcgtcg ccgcgattga gacgcgccgc agcatactgc tcaccggctg gtgtgtactg
     1861 gcagcgatcg tgctggcgct ggtgatcgct gtgggcgtca gcgttggcga gctggccatc
     1921 ccgctgcaga atgtctttta tgctatcagc aacagaaccg gcttaaccgc tgagccgctc
     1981 aaccgtatct atgagagcgt tatctgggat ttccgcctca gccgcgcgct ggtcgccgcc
     2041 tgctgcggcg ccggcctcgc tatctgcggt gttgtgctgc aaagcttgct gaagaatgcc
     2101 ctcgccgaac cctacgtcct cggcgtctcc gccggggcct ccaccggcgc ggtgtcgatc
     2161 gtggtgctgg gccttggtgc tggcgcaatt tccctctcgg caggcgcctt tgccggggcc
     2221 ttcgccgcct tcgcctttgt cgccttgctg actaacggcg cgcgcggcgg caatgagcgt
     2281 acgattcttg cgggcgtcgc cgcctcgcag ttatttaacg ccatcacggc ctataccatc
     2341 agcacctccg ccagcgcgca gcaggcgcgc gatgtgatgt tctggctgct gggcagcttc
     2401 agcggcgtcc gctggcccga attccagttg gtcatcgtgg tggtgctcgc gggtctggcg
     2461 gtctgcctgt ggtatgcccg ggcgctggac gcgttcacct tcggcgacga tgccgccgcc
     2521 tcgctgggga ttgctgtgcc gcgcgtgcgc ctgatcctct tcaccactgc ggcgctgatc
     2581 accgccacca tcgtcagcat ggccggctca atcggctttg ttggcctggt ggtgccgcac
     2641 gtgatgcgtt tcttctttgg cccactgcac cgaactttgc tgatcgccag cgcgctggca
     2701 ggggcgatat tgatggtact ggcggacatt gcgtcgcgcc tgctgattgc cccgcaaagt
     2761 ctgcccgttg gggtagtaac cgccctggtt ggggtgcctt tctttgccgt gattatctac
     2821 cgctcaagga ataagtgatg agtatttgcg ctgaaaatat cacctggaag gcaggcaaaa
     2881 aggtcatcgt caataatgtc tcgctgcggg tgccgcgcgg cgaaacggtc ggactgctgg
     2941 ggcccaacgg ctgcggcaaa tcctcgctgc tgcgcgttct ggcgggcctg cgccgcccgg
     3001 atgcaggtcg cgtcaccctc gacggccagg atatcgcccg gatggcgaaa aagcagctcg
     3061 cccgccgcgt ggcttacgtc gagcaacacg gcatgaccga ggccaatatg cgggtgcgcg
     3121 acgtcgtgcg cctgggacgc attccccacc actctccgtt ctcaaactgg agcgctcagg
     3181 atgacgaagc gattgccgcc gcgctgcagc gggtagcgat gctggagaaa agcgaacagg
     3241 gatggttaag cctctccggc ggcgagcggc agcgggtgca tatcgcccgc gcgctggcgc
     3301 agagcccgag cgaaatcctg ctggatgagc cgaccaacca tctggatata caccatcaga
     3361 tgcagttaat gcagttgatc agcgagctgc cggtaaccag cattgtggcc attcacgatc
     3421 ttaaccatgc cgcgatgttc tgcgattcgc tgatcgtgat gcagcagggg cagatcctcg
     3481 ccagcgggac gccggaggag attttgtccg aagcgctgct gtgggacgtt ttccgggtga
     3541 aaaccaaaat cgagatctcc ccttaccacg gcaaaaagca cattcatttc atcgtttagg
     3601 ttgggcggat atgcctcttt tctccctgcg ccctgcggca accctctggc ctccggtgtt
     3661 actgggaagc cagttcgttt ttaatattgg cttttacgcg gtcgttcctt tcctcgccct
     3721 cttcctgcgc gacgacatgc tgctctcagg cggacttatc ggcctgatcc tcgggctgcg
     3781 taccttctcc caacagggga tgtttatcct cggcgggacg ctggccgacc gctatggcgc
     3841 taaggcgatc attctcgccg gctgcgtcgt tcgcgtcgcc ggttttctcc tgctggcgtg
     3901 cggggcgtcg ctgtggccca ttatccttgg cgcctgcctg accggcgtcg gcggcgccct
     3961 gttctccccg tcgatagagg ccctgctggc gcgggccggt acccacagcc aggccaacgg
     4021 gaaacgcagc cgcgccgagt ggtttgcgct gtttgcggta tgcggtgaac tgggagcggt
     4081 gatcggcccg gtggccggag gcgtgctgag cgggatcggc tttcggcata tcgccctcgc
     4141 cggcgcggga atatttcttc tggcgctggc ggtgctcttt ttcggtctgc ccgccgacgg
     4201 gcacacgaca acaacgcgca gacgagtccc atggtggacg cctttgcgcc agccgcgctt
     4261 tgtcgcgttt attctcgcct acagctcatg gctgttgagc tacaaccaac tgtacctcgc
     4321 cctgccggtg gagatccaac gttccggcgg ccgcgagcag gatctggcgc cgctctttat
     4381 gctggcctcg ctgttgatta tcaccctcca gctccctctc gcccgcttcg cccggcgaat
     4441 gggcgccgtg cgcatcctgc cggtgggctt tctgctgctg tcggcttcct ttgccagcgt
     4501 ggcgttattc gccgccgccc cacccgccga aagttggctg cggttaatgc cggcggctgg
     4561 ttttgtcacg ctgctcaccc tcggccagat gctgttagtg cccgcagcca aggatctgat
     4621 cccgctgttc gccgaggagt cgacgctggg tgcccactac ggagcgctcg ccactgcagg
     4681 agggtgcgcg gtgttagccg ggaatttact gctcggtcat ttacttgacc aggcgctcat
     4741 tccgtcgccg caggcggttt atccctggct tctgctggcg ctgtttccgc tgtgcagcgc
     4801 cgtcgccctg cgggcgatct gtcgcccgct ggcggcaaca tgacgcagag cgggtaacag
     4861 cccgctctgg aagtgaacag ctagtatcca tattttcagc taatccttta gcaaagatcc
     4921 tggggtcagt ttggatatcg aaaattattg tacgtttaac gcaccatcat taatgctaat
     4981 gtatgcatac attagcatta cctagattct acgtcagtac ttcaaaaagc ataatcaaag
     5041 ccttgataaa tatgcattcc ttcgaaattc agctttcacc cattgggtga aagaaaagtg
     5101 ctcaaaaata tgttaaatta tcagctttta tgactcgata tatggtaaaa taatagtaag
     5161 aaaagtagta aaaaggggtt ctaattatga ttaataaaat tgatttcaaa gctaagaatc
     5221 taacatcaaa tgcaggtctt tttctgctcc ttgagaatgc aaaaagcaat gggatttttg
     5281 attttattga aaatgacctc gtatttgata atgactcaac aaataaaatc aagatgaatc
     5341 atataaagac catgctctgc ggtcacttca ttggcattga taagttagaa cgtctaaagc
     5401 tacttcaaaa tgatcccctc gtcaacgagt ttgatatttc cgtaaaagaa cctgaaacag
     5461 tgtcacggtt tctaggaaac ttcaacttca agacaaccca aatgtttag
//
LOCUS       DAPGWB010000229         5377 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.231, whole genome shotgun sequence.
ACCESSION   DAPGWB010000229 DAPGWB010000000
VERSION     DAPGWB010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5377
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.231"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            163..1221
                     /gene="citC"
                     /locus_tag="RHX79_004376"
     CDS             163..1221
                     /gene="citC"
                     /locus_tag="RHX79_004376"
                     /EC_number="6.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[citrate (pro-3S)-lyase] ligase"
                     /protein_id="HDV2199467.1"
                     /translation="MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTR
                     DEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYE
                     ALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNG
                     HRYLIQQAAAQCNWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISR
                     ATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMR
                     YWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQ
                     NLLEHSRQDAAARQKTPA"
     gene            1236..1532
                     /gene="citD"
                     /locus_tag="RHX79_004377"
     CDS             1236..1532
                     /gene="citD"
                     /locus_tag="RHX79_004377"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase acyl carrier protein"
                     /protein_id="HDV2199468.1"
                     /translation="MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDA
                     IRTTILDVLARYNVRGVQLNVDDKGALDCILRARLEALLARASGIPALPWEDCQ"
     gene            1529..2437
                     /gene="citE"
                     /locus_tag="RHX79_004378"
     CDS             1529..2437
                     /gene="citE"
                     /locus_tag="RHX79_004378"
                     /EC_number="4.1.3.34"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (pro-3S)-lyase subunit beta"
                     /protein_id="HDV2199469.1"
                     /translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE
                     DSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRL
                     PKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGI
                     ALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEA
                     AHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNG
                     KMVDGPVIDRARLVLSRAELSGIREE"
     gene            2448..3980
                     /gene="citF"
                     /locus_tag="RHX79_004379"
     CDS             2448..3980
                     /gene="citF"
                     /locus_tag="RHX79_004379"
                     /EC_number="2.8.3.10"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HDV2199470.1"
                     /translation="MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDR
                     KLCANLEEAIRRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSD
                     CHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNI
                     DVAFLGVPSCDEFGNANGYTGKACCGSLGYAMVDADNAKQVVMLTEELLPYPHNPASI
                     EQDQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQT
                     GTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAA
                     QSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEIDTQFNVNVLTGSDGVLRG
                     ASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPAR
                     PELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQV
                     KE"
     gene            3984..4535
                     /gene="citX"
                     /locus_tag="RHX79_004380"
     CDS             3984..4535
                     /gene="citX"
                     /locus_tag="RHX79_004380"
                     /EC_number="2.7.7.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase holo-[acyl-carrier protein]
                     synthase"
                     /protein_id="HDV2199471.1"
                     /translation="MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFT
                     VVAPGPIKDSEVTRRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPAR
                     DLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRSCLLCEQSAAVCARGKT
                     HQLTDLLNRMEALLNDVDACNVN"
     gene            4510..>5377
                     /gene="citG"
                     /locus_tag="RHX79_004381"
     CDS             4510..>5377
                     /gene="citG"
                     /locus_tag="RHX79_004381"
                     /EC_number="2.4.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase CitG"
                     /protein_id="HDV2199472.1"
                     /translation="MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDR
                     INCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDM
                     FRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTN
                     NSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLL
                     LMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSP
                     GGSADLLILTWFL"
BASE COUNT         1227 a         1527 c         1430 g         1193 t
ORIGIN      
        1 tcacgccgaa atactcctta ggatgtatag cgaaaggaga aaaagatata cctcgatcac
       61 ccccctttct cccaagtgaa aataaaaggt tatcagtttg caacattgaa caacattcgt
      121 tgcaaatcga taacaacatg caccttcagg atactattta ttatgttcgg caatgatatt
      181 ttcacccgcg taaaacgttc agaaaataaa aaaatggcgg aaatcgccca attcctgcat
      241 gaaaatgatt tgagcgttga caccacagtc gaagtattta ttaccgtaac ccgcgatgaa
      301 aagcttatcg cgtgcggtgg aattgccgga aatattatta aatgcgttgc tatcagtgaa
      361 tccgttcgcg gtgaaggact ggcgctgaca ttagccactg aactgataaa cctcgcctat
      421 gagcggcaca gcacgcatct gtttatttat accaaaaccg aatacgaggc gctgttccgc
      481 cagtgcggtt tttccacgct gaccagcgta cccggcgtga tggtgctgat ggaaaacagc
      541 gccacgcggc tgaaacgcta tgccgaatcg ctgaaaaaat ttcgtcatcc agggaacaag
      601 attggctgca ttgtgatgaa cgccaatccc ttcacgaatg gtcaccgtta tctgattcaa
      661 caagctgcgg cacagtgcaa ctggttgcat ctgtttttag tcaaagaaga ttcttcacgc
      721 ttcccctatg aagaccggtt ggatctggtg ttaaaaggca ccgccgatat tccacgcctg
      781 actgtgcatc gcggctccga atacatcatc tcccgcgcta cgttcccttg ctacttcatt
      841 aaagaacaga gcgtcattaa ccattgttac accgaaattg atctgaagat tttccgtcag
      901 tacctcgctc ccgcgctggg tgtaactcac cgctttgtcg gtactgaacc cttttgtcgc
      961 gttaccgccc agtacaacca ggatatgcgc tactggctgg aaacgccgac tatctccgca
     1021 ccgcccatcg aactggttga aattgagcgg ctgcgttacc aggagatgcc gatatccgct
     1081 tcccgggtac gtcaactgct ggcgaaaaac gatctcacgg ctatcgcgcc gctggtccct
     1141 gcagtcacgc tgcattattt gcagaacctg cttgagcact cccgccagga cgcggcagct
     1201 cgtcaaaaga cccccgcatg agaaacaggt gaaaaatgaa aataaaccag cccgccgttg
     1261 caggcaccct tgagtctggg gatgtgatga tacgcatcgc cccactcgat acgcaggata
     1321 tcgacctgca aatcaatagc agcgttgaga aacagtttgg cgatgcaatt cgcaccacca
     1381 ttctggacgt tctcgcccgc tacaacgtgc gcggcgtaca gctgaatgtc gatgacaaag
     1441 gcgcactgga ctgcatttta cgtgcacgac tggaagccct gctggcacgc gccagcggta
     1501 tcccggctct gccatgggag gattgccaat gatttccgct tcgctgcaac aacgtaaaac
     1561 tcgcacccgc cgcagcatgt tgtttgtgcc tggtgccaat gccgcgatgg tcagcaactc
     1621 cttcatctac ccggctgatg ccctgatgtt tgacctcgaa gactccgtgg cattacgtga
     1681 aaaagacacc gcccgccgca tggtttatca cgcgctgcaa catccgctgt atcgcgatat
     1741 tgaaaccatt gtgcgtgtca acgcgctgga ttccgaatgg ggtgttaacg acctggaagc
     1801 cgtcgttcgc ggtggtgcgg acgttgtgcg tctgccgaaa accgataccg ctcaggatgt
     1861 tctggatatt gaaaaagaga tcctgcgtat cgaaaaagcc tgtggtcgtg aacccggcag
     1921 caccggcctg ctggcggcga ttgaatctcc gctgggcatt acccgcgcag tggaaatcgc
     1981 tcacgcttcc gagcgtttga tcggtatcgc cctcggtgca gaagactatg tgcgcaacct
     2041 gcgtacagaa cgctccccgg aaggaactga actgctgttc gcacgctgtt ccattttgca
     2101 ggccgcgcgc tctgcgggta ttcaggcgtt cgataccgtc tattccgacg ctaacaacga
     2161 agccggattc ctgcaagaag ccgcccacat caaacagctg ggctttgacg gcaaatcgct
     2221 gatcaacccg cgtcagattg atctgttgca caacctctac gcaccaaccc agaaagaagt
     2281 ggatcacgcc cgccgcgtcg tagaagccgc tgaagccgcc gctcgcgaag gcctcggcgt
     2341 ggtttccctg aacggcaaga tggtggacgg tccggttatc gatcgcgccc gtctggtgct
     2401 ctctcgtgca gaactttccg gcatccgcga agaataaggc aatcaaaatg acgcagaaaa
     2461 ttgaacaatc tcaacgacaa gaacgggtag cggcctggaa tcgtcgcgct gaatgcgatc
     2521 ttgccgcttt ccagaactcg ccaaagcaaa cctaccaggc tgaaaaagcg cgcgatcgca
     2581 aactgtgcgc caacctggaa gaagcgattc gtcgctctgg tttacaggac ggcatgacgg
     2641 tttccttcca tcacgctttc cgtggcggtg acctgaccgt caatatggtg atggacgtca
     2701 tcgcgaagat gggctttaaa aacctgaccc tggcgtccag ctccctgagt gattgccatg
     2761 cgccgttggt agaacacatt cgccagggcg tggttacccg catttatacc tccggcctgc
     2821 gcggtccact ggcggaagag atctcccgtg gtctgctggc agaaccggtg caaatccact
     2881 ctcacggcgg tcgcgtgcat ctggtacaga gcggcgaact gaatatcgac gtggctttcc
     2941 tcggcgtccc gtcctgcgat gaattcggta atgccaacgg ctacaccggt aaagcctgct
     3001 gcggctccct cggctatgca atggttgatg ccgacaacgc aaagcaggtc gtgatgctta
     3061 ccgaagaact gctgccttat ccgcataatc cggcaagcat tgagcaagat caggttgatt
     3121 tgatcgtcaa agttgaccgc gttggcgatg ctgcaaaaat cggcgctggc gcgacccgta
     3181 tgaccactaa cccgcgcgaa ctgcttattg cccgtagcgc tgcggatgtg attgtcaact
     3241 caggctactt caaagaaggt ttctccatgc aaaccggcac cggcggcgca tcgctggcgg
     3301 taacccgttt cctggaagac aaaatgcgta gccgcgatat tcgcgccgac ttcgccctcg
     3361 gtggtattac cgcgacgatg gttgatctgc acgaaaaagg tctgatccgc aaactgctgg
     3421 atgtacagag ctttgacagc cacgctgcgc aatcgctggc ccgtaacccc aatcacatcg
     3481 aaatcagcgc caaccagtac gctaactggg gttcgaaagg tgcatcggtt gatcgtctcg
     3541 acgtggtggt actgagcgcg ctggaaattg acacccagtt caacgttaac gtgctgaccg
     3601 gctctgacgg cgtactgcgt ggtgcttccg gtggtcactg cgataccgcg attgcctctg
     3661 cgctttccat catcgtcgcg ccgctggtac gcggtcgtat tccgactctg gtggataacg
     3721 tgctgacctg catcaccccg ggctccagtg tcgatattct ggtcacagac cacggtatcg
     3781 cagttaaccc ggcacgtccg gagctggcag aacgtctgca ggaagcgggc attaaagtgg
     3841 tttccattga gtggctgcgt gaacgtgcgc gtctgctgac cggtgaacca cagccgattg
     3901 aattcaccga ccgcgtcgtt gccgttgtgc gttaccgcga tggctcggtg atcgatgttg
     3961 tacatcaggt gaaggaataa gccatgcacc tgcttcctga actcgccagc caccatgcgg
     4021 tgtcaattcc cgagctgctc gtcagccggg atgaaaggca agcacggcaa cacgtctggc
     4081 tcaagcgcca tcctgttcca ctggtctcct ttaccgtggt tgcgcctggg ccgattaaag
     4141 acagtgaggt cacacgccga atttttaatc atggcgtgac agccttgcgt gccttagccg
     4201 caaaacaggg ctggcaaatt caggagcagg ctgcactggt ttccgccagc gggccggagg
     4261 gtatgttgag cattgccgcc ccggctcgcg acctcaagct cgccaccatt gagcttgaac
     4321 atagtcatcc tctcgggcgg ttatgggata tcgatgtcct gacgcccgaa ggcgaaattc
     4381 tctcccgccg cgactattca ctgccgcctc gcagctgcct gttgtgcgag caaagcgcag
     4441 ccgtctgcgc gcgtggaaaa acccatcaac tgaccgattt actcaaccgc atggaggcac
     4501 tgctgaacga tgtcgatgcc tgcaacgtca actaaaacca caaagcttgc gacgtcatta
     4561 atcgatgagt acgccctgct gggctggcgc gccatgctga ctgaagtcaa tctgtcaccg
     4621 aaaccaggcc tcgtggatcg gattaactgc ggtgcgcata aagatatggc gctggaagat
     4681 ttccaccgca gcgcgctggc gattcagggc tggctacccc gtttcattga atttggtgcc
     4741 tgtagtgcgg aaatggcacc agaagcggta ctccacggat tacgcccaat tggtatggct
     4801 tgcgaaggtg atatgttccg cgccactgcg ggcgtaaaca cgcataaagg cagcattttt
     4861 tctttagggc tgctatgtgc ggcaattggc cgtttgcttc agctcaacca gccggtaacg
     4921 ccaacaaccg tttgttctac ggcggcaagt ttctgccgtg gtctgaccga tcgcgaactg
     4981 cgtaccaata attcacaact gacggcaggt caacggttgt accagcagct tggccttacc
     5041 ggcgcacgcg gtgaagccga agcgggttat ccactggtga tcaaccacgc cttgccgcat
     5101 tacctcactc tgctggatca ggggttagat cctgaactgg cattgctcga taccttgctc
     5161 ctactgatgg cgatcaacgg cgataccaac gttgcttcgc gcggtggcga ggggggcctg
     5221 cgctggctac agcgcgaggc gcaaacatta ttgcaaaaag ggggcattcg aacccccgcc
     5281 gatctcgatt atctccggca gttcgacagg gagtgtatcg aacgaaatct cagtccaggc
     5341 ggcagtgccg acctgctgat ccttacctgg tttttag
//
LOCUS       DAPGWB010000230         5341 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.232, whole genome shotgun sequence.
ACCESSION   DAPGWB010000230 DAPGWB010000000
VERSION     DAPGWB010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5341
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.232"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            154..852
                     /locus_tag="RHX79_004382"
     CDS             154..852
                     /locus_tag="RHX79_004382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000577178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDV2199473.1"
                     /translation="MIFQKIARLLKSEINGNSWHVGDLLPSEAELAVRYNVSRNTLRK
                     ALSLLEGEGIIHRKHGSGTYIQKKNFVAHIDHMNSFSEIAHKSGKEAGSQIMKFEVQD
                     ASPTIATELNLVTGEQVYYIKRLRFIEDNAAQLEETWMSVARFPDLTVSHMQKSKFSY
                     IENECGIKIIGTFETFSPTFPTPEIASILRISPRDPILKIQTQAVDSNSIPLDYSLLY
                     SNIFEFQVKYFFPR"
     gene            complement(897..1796)
                     /gene="eamA"
                     /locus_tag="RHX79_004383"
     CDS             complement(897..1796)
                     /gene="eamA"
                     /locus_tag="RHX79_004383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylserine/cysteine exporter"
                     /protein_id="HDV2199474.1"
                     /translation="MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVA
                     FPAIFFVARPKVPLNLLLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIV
                     LGAFTFGERLHGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNI
                     FNKKIMSHSTRPAVMSLVIWSALIPIIPFFVASLILDGSASMIHSLVTIDMTTILSLM
                     YLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAV
                     LIMTGLYINVFGLRWRKAVKVRG"
     gene            1991..3178
                     /gene="ydeE"
                     /locus_tag="RHX79_004384"
     CDS             1991..3178
                     /gene="ydeE"
                     /locus_tag="RHX79_004384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux MFS transporter YdeE"
                     /protein_id="HDV2199475.1"
                     /translation="MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDL
                     IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLF
                     FALINCAYSVFATVLKAWFADNLSSTSKTKIFSINYTMLNIGWTIGPPLGTLLVMQSI
                     NLPFWLAAICSAFPMLFIQIWVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLA
                     SFVSGAFASCISQYVMVIADGDFAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRAL
                     MTADTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKAS
                     YFSAQSLGWLGAAINPLVSGVVLTSLPPSSLFVILALVIIAAWVLMLKGIRARPWGQP
                     ALC"
     gene            3305..3400
                     /gene="mgtS"
                     /locus_tag="RHX79_004385"
     CDS             3305..3400
                     /gene="mgtS"
                     /locus_tag="RHX79_004385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein MgtS"
                     /protein_id="HDV2199476.1"
                     /translation="MLGNMNVFMAVLGIILFSGFLAAYFSHKWDD"
     gene            complement(3619..4509)
                     /gene="dgcZ"
                     /locus_tag="RHX79_004386"
     CDS             complement(3619..4509)
                     /gene="dgcZ"
                     /locus_tag="RHX79_004386"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcZ"
                     /protein_id="HDV2199477.1"
                     /translation="MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEIT
                     DNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAH
                     FDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNTEPLNLY
                     LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAN
                     DEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEG
                     KQTGRNRCMFIDEQNVINRV"
     gene            complement(4764..5156)
                     /gene="ydeI"
                     /locus_tag="RHX79_004387"
     CDS             complement(4764..5156)
                     /gene="ydeI"
                     /locus_tag="RHX79_004387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI family stress tolerance OB fold protein"
                     /protein_id="HDV2199478.1"
                     /translation="MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGT
                     DDAKKMTVDFAKNMHDGASVSLRGNLISHKGEDRYVFRDKSGEINVVIPAAVFDGREV
                     QPDQMINISGSLDKKSAPAVVRVTHLQK"
BASE COUNT         1480 a         1271 c         1122 g         1468 t
ORIGIN      
        1 tatcccgcag tagctatacg tcctggtaca ttgatcacag taatacagtg ataaagttgt
       61 tcaacatcag ggtgattatt aaacgactcg gccatacgat aaaccaatca ggactcaact
      121 ccttgttttc aatggctctt aaaaggtgca aaagtgattt ttcaaaagat tgcccgctta
      181 cttaaatccg aaatcaatgg caattcatgg catgttggtg atttgttgcc gtcagaagcg
      241 gaactcgctg ttcgttataa tgtttcgcgt aataccctgc gtaaggcatt atccttgctg
      301 gaaggcgaag gaattattca cagaaagcat ggttcaggaa catacattca aaaaaagaat
      361 tttgttgcac acattgatca catgaacagt ttcagtgaaa ttgcgcataa aagcggcaaa
      421 gaggcaggga gtcagattat gaaatttgaa gtgcaggatg cttcacccac tattgcgact
      481 gagctgaatt tagtgactgg tgagcaggtt tattacataa agagactgcg attcattgag
      541 gataatgcag cacaattaga agaaacgtgg atgtcagtag cacgttttcc tgatttaacc
      601 gtgtcacata tgcaaaaatc caaattttca tatattgaga atgaatgcgg gatcaaaatc
      661 attggcacct ttgaaacttt ctcccctact tttcctaccc cagaaatcgc cagtatttta
      721 cggatcagcc cacgggatcc catacttaaa attcagaccc aggctgtgga cagtaactct
      781 attccgctgg attattcgtt actttacagc aatattttcg agttccaggt aaagtacttt
      841 ttcccgcgat aaaagcagac gcacagagtg ctgacatcac attctgtgcg tatggtttag
      901 cctctaacct ttaccgcttt acgccaccgc aagccaaata cattgatata cagcccggtc
      961 ataatgagca ccgcacctaa aaattgcaga cccgttaagc gttcatccaa caatagtgcc
     1021 gcacttgcca gtccgactac gggcaccagt aacgataacg gtgcaacccg ccaggtttca
     1081 tagcgtccca gtaacgtccc ccagatccca taaccaacaa ttgtcgccac aaacgccaga
     1141 tacatcagcg acaagatggt ggtcatatca atagtaacca gactgtgaat catggatgcg
     1201 gaaccatcga gaatcagcga ggcaacaaag aagggaatga ttgggattaa agcgctccag
     1261 attaccagcg acatcaccgc cggacgcgtt gagtgcgaca tgatcttttt attgaagatg
     1321 ttgccacacg cccaactaaa tgctgcagcc agggtcaaca taaagccgag catcgccaca
     1381 tgctgaccgt tcagactatc ttcgattaac accagtacgc caaaaatcgc taaggcgatc
     1441 cccgccaatt gtttgccatg caatcgctcc ccgaaagtaa acgcgccaag cacgatagta
     1501 aaaaacgcct gtgcctgtaa caccagcgaa gccagtccag caggcatacc gaagttaatg
     1561 gcacaaaaaa gaaaagcaaa ctgcgcaaaa ctgatggtta atccataccc cagcagcaaa
     1621 ttcagtggta ctttcggtcg tgcgacaaaa aagatagccg gaaaagcgac cagcataaag
     1681 cgcaaaccgg ccagcatcag cggtggcatg ttatgaagcc ccactttgat gaccacaaaa
     1741 tttagccccc atacgaccac taccagtagc gccaacaccc catcttttcg cgacattcta
     1801 ccgcctctga atttcatctt ttgtaagcaa tcaacttagc tgaatttact tttctttaac
     1861 agttgattcg ttagtcgccg gttacgacgg cattaatgcg caaataagtc gctatacttc
     1921 ggatttttgc catgctattt ctttacatct ctaaaacaaa acataacgaa acgcactgcc
     1981 ggacagacaa atgaacttat ccctacgacg ctctaccagc gcccttcttg cctcgtcgtt
     2041 gttattaacc atcggacgcg gcgctacgct gccatttatg accatttact tgagtcgcca
     2101 gtacagcctg agtgtcgatc taatcggtta tgcgatgaca attgcgctca ctattggcgt
     2161 cgtttttagc ctcggttttg gtatcctggc ggataagttc gacaagaaac gctatatgtt
     2221 actggcaatt accgccttcg ccagcggttt tattgccatt cctttagtga ataacgtaac
     2281 gctggtggtg ctcttttttg ccctcattaa ctgcgcctat tctgtttttg ctaccgtgct
     2341 gaaagcctgg tttgccgaca atctttcgtc caccagcaaa acgaaaatct tctcaatcaa
     2401 ctacaccatg ctaaacattg gctggaccat cggtccgccg ctcggcacgc tgttggtgat
     2461 gcagagcatc aatctgccct tctggctggc agctatctgt tccgcgtttc ccatgctttt
     2521 cattcaaatt tgggtaaagc gcagcgagaa aatcatcgcc acggaaacag gcagtgtctg
     2581 gtcgccgaaa gttttattac aagataaagc actgttgtgg tttacctgct ctggttttct
     2641 ggcttctttt gtaagcggcg catttgcttc atgcatttca caatatgtga tggtgattgc
     2701 tgatggggat tttgccgaaa aggtggtcgc ggttgttctt ccggtgaatg ctgccatggt
     2761 ggttacgttg caatattccg tgggccgccg acttaacccg gctaacatcc gcgcgctgat
     2821 gacagcagac accctatgtt tcgtcatcgg tctggtcggt tttatttttt ccggcaacag
     2881 cctgctattg tggggtatgt cagctgcggt atttactgtc ggtgaaatca tttatgcgcc
     2941 gggcgagtat atgttgattg accatattgc gccgccagga atgaaagcca gctatttttc
     3001 cgcccagtct ttaggctggc ttggtgccgc gattaaccca ttagtgagtg gcgtagtgct
     3061 aaccagcctg ccgccttcct cgctgtttgt catcttagcg ttggtgatca ttgctgcgtg
     3121 ggtgctgatg ttaaaaggga ttcgtgcaag accgtggggg cagcccgcgc tttgttgatt
     3181 taagtcgaac acaataaaaa tttaattcag ccttcgttta ggttacctct gctaatatct
     3241 ttctcattga gatgaaaatt aaggtaagcg aggaaacaca ccacaccata aacggaggca
     3301 aataatgctg ggtaatatga atgtttttat ggccgtactg ggaataattt tattttctgg
     3361 ttttctggcc gcgtatttca gccacaaatg ggatgactaa tgaacggaga taatccctca
     3421 cctaaccggc cccttgttac agttgtgtac aaggggcctg atttttatga cggcgaaaaa
     3481 aaaccgccag taaaccggcg gtgaatgctt gcatggatag atttgtgttt tgcttttacg
     3541 ctaacaggca ttttcctgca ctgataacgg atcgttgaca cagtagcatc agttttctca
     3601 atgaatgtta aacggagctt aaactcggtt aatcacattt tgttcgtcaa taaacatgca
     3661 gcgatttctt ccggtttgct taccctcata cattgcccgg tctgctcttc caatgaccac
     3721 atccagaggc tcttcaggaa atgcgcgact cacacctgct gtcacggtaa tgttgatatg
     3781 cccttcagaa tgtgtgatgg catggttatc gactaactgg caaattctga cacctgcacg
     3841 acatgcttct tcatcattag ccgctttgac aataatgata aattcttcgc ccccgtagcg
     3901 ataaaccgtt tcgtaatcac gcgtccaact ggctaagtaa gttgccaggg tgcgtaatac
     3961 tacatcgccg attaaatgcc cgtaggtatc attaaccaat ttaaatcggt caatatccaa
     4021 caacattaaa taaagattca gaggctcagt gttgcgtaac tgatgatcaa aggattcatc
     4081 aagaacccga cgccccggca atcccgtcaa aacatccata ttgctacgga tcgtcagcaa
     4141 ataaattttg taatcggtta atgccgcagt aaaagaaagc aacccctcct gaaaggcgtc
     4201 gaaatgcgcg tcctgccagt gattttcaac aatagccagc attaattccc gaccacagtt
     4261 atgcatatgt tgatgggcag aatccattag ccgaacgtaa ggtaattcat cgttatcgag
     4321 tggccccaga tgatcaatcc accgaccaaa ctggcacagt ccataagaat ggttatccgt
     4381 tatttctggc ttactggcat ctctcgcgac cacgctgtga aacatactca ccagccactg
     4441 gtagtgggca tcgatagcct tattgagatt taacaagatg gcatcaattt ccgttgtctt
     4501 cttgatcatt gccactcctt tttcacagtt ccttgtgcgc gctattctaa cgagagaaaa
     4561 gcaaaattac gtcaatattt tcatagaaat ccgaagttat gagtcatctc tgagataaca
     4621 ttgtgattta aaacaaaatc agcggataaa aaagtgttta attctgtaaa tcacctctgc
     4681 attatcgtaa ataaaaggat gacaaatagc ataatccaat accctaatgg cccagtagtt
     4741 caggccatca ggctaattta tttttatttc tgcaaatgag tgacccgaac gacggccggc
     4801 gcgcttttct tatccagact gccgctaatg ttgatcatct ggtccggctg aacttctcgt
     4861 ccatcaaaga cggccgcagg aataacgaca ttaatttcac cgctcttatc gcgaaaaacg
     4921 taacggtcct ctcctttgtg agaaatcaaa ttaccgcgta gtgaaaccga agcgccatcg
     4981 tgcatgtttt ttgcgaaatc aacggtcatt ttttttgcat catcggttcc gcgatagcca
     5041 tcttctattg catgaggcgg cggtggcgct gcatcctgtt ttaaaccgcc ctggtcatct
     5101 gccaacgcat aaggcatgac aagaaaactt gctaatacaa tggcctgaaa tttcatacta
     5161 actccttaat tgcgtttggt ttgacttatt aagtctggtt gctattttta taattgccaa
     5221 ataagaatac tgccaattgt tataaggcat ttaaaatcag cccactagct gtcaaatatt
     5281 cagagaattt aactcactaa agttaagaag attgaagagt cttaaacata ttttcagaat
     5341 a
//
LOCUS       DAPGWB010000231         5277 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.233, whole genome shotgun sequence.
ACCESSION   DAPGWB010000231 DAPGWB010000000
VERSION     DAPGWB010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5277
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.233"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            32..541
                     /locus_tag="RHX79_004388"
     CDS             32..541
                     /locus_tag="RHX79_004388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000475132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like protein"
                     /protein_id="HDV2199479.1"
                     /translation="MILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVA
                     DTVLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTMTGQTDLLKNTKETE
                     IGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMESPSKDATPGNVYA
                     QADYKIAYE"
     gene            601..3105
                     /locus_tag="RHX79_004389"
     CDS             601..3105
                     /locus_tag="RHX79_004389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001480735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HDV2199480.1"
                     /translation="MYKKLKLTTISELIKNIYCSLSVLIIGCASAYAVEFNKDLIEAE
                     DRENVNLSQFETDGQLPVGKYSLNALINNKRTPIHLDLQWVLIDNQTAVCLTPEQLTL
                     LGFTDEIIEVAQQNLIDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPP
                     ELWDHGIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFN
                     NGKSQANNLDFPRIYLFRPIPAINAKLTIGQYDTESSIFDSFHFSGVSLKSDENMLPP
                     DLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFAITNLFNTLQGQLDVKVEEE
                     DGQVTQWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNV
                     SLYGGSVLTNRDYQSLAAGVGFNLNSLGSLSFDVTRSDAQLHNQDKETGYSYRANYSK
                     RFESTGSQLTFAGYRFSDKNFVTMNEYINDTNHYTNYQNEKESYIVTFNQYLESLRLN
                     TYVSLARNTYWDASSNVNYSLSLSRDFDIGPLKNVSTSLTFSRINWEEDNQDQLYLNI
                     SIPWGTSRTLSYGMQRNQDNKISHTASWYDSSDRNNSWSVSASGDNDEFKDMKASLRA
                     SYQHNTENGRLYLSGTSQRDSYYSLNASWNGSFTATRHGAAFHDYSGSADSRFMIDAD
                     GAEDIPLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTRNLPENVDIENSVITTTLTEG
                     AIGYAKLDTRKGYQIMGVIRLADGSHPPLGISVKDKTSHKELGLVADGGFVYLNGIQD
                     DSKLTLRWGDKSCFIQPPNSSNLTTGTVILPCISQN"
     gene            3121..3870
                     /locus_tag="RHX79_004390"
     CDS             3121..3870
                     /locus_tag="RHX79_004390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDV2199481.1"
                     /translation="MRYLNTKNLIAAGVLLACMSSIAWGAIIPDRTRIIMNESDKGEA
                     LKLTNQSKNLPYLAQTWIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMISQEKIAQL
                     PNDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMSYEKVEII
                     RRNDGSIRFNNKMPYHVTLGYIGTNGITMLPQTQSLMVTPYSHADTQFKNVPSAFQVG
                     YINDFGGLSFYEINCPTVNNSCNVSVAKRDK"
     gene            3872..4936
                     /locus_tag="RHX79_004391"
     CDS             3872..4936
                     /locus_tag="RHX79_004391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2199482.1"
                     /translation="MRYLLIVIIFIIGFSALPVWAMDCYAEHEGGNTVVIGYVPRISI
                     PSNGKKGDKIWQSSEYFMNVFCNNALPAPSPGEEYPSAWTNIMMFLPGGQDFYNQNSY
                     IFGVTYNGVDYDSTAPNAIAAPECIDIKGAGTFNNHYKNPAVCSGGPEPQLSVTFPAR
                     VQLYIKLAKNANRVNKNLVLPDEYIALEFKGMSGAGAIEVDKNLTFRIRGLNNIHVLD
                     CFVNVALEPADGVVDFGKINSRTIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTT
                     DILSDYSHLDMGNGLLLKIFHKDGTATEFNRFSQFASFSSSSAPSVTAPFRAELSANP
                     AETVVEGPFSKDVILKITYN"
     gene            complement(4979..5179)
                     /gene="glgS"
                     /locus_tag="RHX79_004392"
     CDS             complement(4979..5179)
                     /gene="glgS"
                     /locus_tag="RHX79_004392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface composition regulator GlgS"
                     /protein_id="HDV2199483.1"
                     /translation="MDHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTW
                     FCARYAWYCQQMMQARELELEH"
BASE COUNT         1631 a         1101 c         1074 g         1471 t
ORIGIN      
        1 taaaaagtca cttcttgttg ctggcgtagc aatgattctt tccaataacg tatttgctga
       61 cgaaggtcac ggcattgtta aatttaaagg tgaagttatc tctgctccat gttcaattaa
      121 accaggtgac gaagacttaa ctgtaaatct gggtgaagta gcagataccg ttctgaaaag
      181 cgaccagaaa tctttggctg agcctttcac tattcacctg caagactgca tgttgagcca
      241 gggtggaacc acttattcaa aagcgaaggt tactttcacc acagcgaata ctatgacggg
      301 tcagactgac ctgctgaaaa acaccaaaga aactgaaatc ggtggtgcca caggcgttgg
      361 cgtacgtatt ctggatagcc agagcggcga agtgacttta ggtactccgg tagtaattac
      421 attcaacaat actaacagct atcaggaact gaacttcaaa gctcgtatgg aatccccaag
      481 caaagatgct accccgggca acgtttacgc tcaggctgac tataagattg cttacgagta
      541 atcacattag gccgggttcg cccggccaca tcattaacgg attaatgata agtggaacag
      601 atgtataaaa aattaaaatt aaccacaata agcgaattga ttaaaaatat ttattgttca
      661 ttatccgttc tcatcattgg ttgtgcgtca gcttatgccg ttgaattcaa caaagattta
      721 atcgaagccg aagatcgtga aaacgttaac ctttcccaat ttgaaactga tggccaatta
      781 cccgtaggta aatactcatt aaacgctctt attaataata aaaggacgcc aatccatctg
      841 gacctgcaat gggtattaat tgataaccaa actgcagttt gtctgactcc agagcaatta
      901 acattattag gctttactga tgagattatt gaagtggctc agcaaaacct gatcgatggt
      961 tgttacccta tcgaaaaaga aaaacaaatt acaacttatc tcgataaagg gaaaatgcaa
     1021 ttatccatat ctgcacctca ggcatggtta aaatacaaag atgcaaactg gacgcctcct
     1081 gaactttggg atcatggtat tgctggggca tttcttgact acaatttata tgcctctcat
     1141 tatgcaccac atcagggcga taattcacaa aatataagtt cctatgggca ggctggggtt
     1201 aatcttgggg cctggcgcct gcgtactgat taccagtacg atcaatcatt taacaatggc
     1261 aaaagccagg cgaacaacct ggattttccg cgtatttatt tgtttcgccc aatcccagca
     1321 attaatgcaa aactaactat aggtcaatac gatactgaat cctctatttt cgactctttc
     1381 catttttctg gcgtttcgtt gaaaagcgat gagaatatgt tgccgcctga tctacgtggt
     1441 tacgcaccgc aaatcacggg tgttgcacaa acgaatgcaa aggtcactgt ctcacagaac
     1501 aaccgtatta tttatcaaga aaatgttcct cctggcccat ttgctattac taatttattc
     1561 aatacattac aggggcaact ggacgtcaag gttgaagaag aggacgggca agtcacgcaa
     1621 tggcaagttg catctaatag tattccttat ctgacgcgta aagggcagat tcgctacacc
     1681 actgctatgg gtaaaccgac cagcgttggt ggtgattcct tacaacaacc cttcttctgg
     1741 actggtgaat tctcatgggg ttggctgaac aatgtatccc tgtatggtgg ttcagtttta
     1801 acaaaccgtg attatcaatc tctggctgcc ggcgttggct ttaaccttaa ctcattgggt
     1861 tcattatctt ttgatgtcac acgatctgat gctcagttgc ataatcagga taaagaaacg
     1921 ggttatagct accgcgctaa ctattcaaaa cgttttgaat ctaccggtag ccagctcact
     1981 ttcgctggtt accgtttctc tgataaaaac tttgtgacaa tgaatgaata tatcaatgac
     2041 actaaccatt acacgaatta tcagaatgaa aaagagagtt atattgtcac gtttaaccag
     2101 tatcttgaat cattaaggtt aaatacatac gtaagtttgg ctcgtaatac ttactgggac
     2161 gccagcagta atgtgaatta ttcattatca cttagccgcg attttgatat cgggccatta
     2221 aaaaacgtct ccacttctct aacatttagc cgaataaact gggaagaaga caaccaggat
     2281 caactgtacc taaatatttc gattccctgg ggaaccagta gaacattgag ctatggtatg
     2341 caacgaaatc aggataacaa gatttcgcat actgcttcgt ggtatgactc ttccgatcga
     2401 aataattcct ggagcgtttc tgcttcaggc gacaatgatg aattcaaaga tatgaaagcg
     2461 tcactacgcg ccagttatca gcataatacc gagaacggtc gtctctatct ctccgggaca
     2521 tcacagcgag acagttatta ttctctgaat gccagttgga atggttcatt cacggcgact
     2581 cgtcacggag ccgctttcca tgactatagt ggtagtgctg actcgcgttt tatgatcgac
     2641 gcagatggtg cagaagatat tccgttgaac aataaacgcg cggtaactaa tcggtatggc
     2701 atcggagtta ttccatcagt cagcagttac ataacaacat cattaagcgt tgatacccga
     2761 aatcttccag aaaatgtgga tatcgaaaac tcggttatca ccaccacctt aaccgaaggt
     2821 gctattggct acgccaaact tgatacccgc aagggctatc aaatcatggg ggttattcgc
     2881 ctggcagatg gtagtcaccc accactgggg attagcgtaa aagataaaac cagccataaa
     2941 gaattaggac tggttgctga tggcggcttt gtatacctca acggcattca ggatgacagc
     3001 aaacttactt tacgctgggg tgataaatcc tgttttattc aaccacccaa tagcagcaac
     3061 ttaaccaccg gaacggttat tttaccgtgt attagccaaa attaattcag gatgaaacta
     3121 atgcgctact taaacacaaa gaatctcatt gcagcaggag tattactcgc ctgcatgagc
     3181 agcattgcct ggggtgccat catcccggac cgtacccgta tcataatgaa tgagtcagat
     3241 aaaggggaag cattaaaact tactaatcaa agcaaaaatc taccctatct ggcgcaaaca
     3301 tggatagaag atacgaaagg caataaatca cgtgacttta ttgtcacggt tccccctatg
     3361 gtacgtttaa atcccagtga gcaaattcaa ataagaatga taagtcagga aaaaattgct
     3421 caactgccta atgacagaga aacgctcttc tattttaacg tgcgagaaat accgccaaaa
     3481 acagataaaa aaaatgtgat gcaagtcact atgcagcacg cattgaaact attctggcga
     3541 ccaaaagcta ttgaattaga agatgatggg gtaatgtctt acgaaaaagt tgaaatcatc
     3601 cgtagaaatg atggttcgat ccgctttaac aataagatgc cttatcacgt tacgctgggt
     3661 tatatcggaa caaacggaat cacaatgttg ccacaaacgc aaagtttaat ggtaacccct
     3721 tatagccatg cagatacgca gtttaaaaat gttccgtcag cttttcaggt tggttatatc
     3781 aatgattttg gtggattaag tttttatgaa ataaactgcc cgacggttaa taactcttgt
     3841 aatgtttccg tagccaaacg agataaataa tatgcgctac ttattaattg taattatatt
     3901 tattataggt tttagtgcat tacctgtatg ggcaatggac tgctatgctg aacatgaagg
     3961 gggaaatacc gtagtcattg gttacgtacc aagaatttct atccccagta atggtaaaaa
     4021 aggtgataag atctggcaaa gcagtgagta ttttatgaat gtcttctgta ataatgcatt
     4081 acctgcccca tcacctggag aagaataccc atcagcctgg actaatataa tgatgttttt
     4141 accaggcggt caggactttt ataatcagaa ctcctatatt tttggcgtaa catacaatgg
     4201 agttgattat gattcgactg cccctaatgc tatcgcagca ccagaatgca ttgatataaa
     4261 aggagcgggt acctttaata atcactataa aaaccccgct gtctgtagtg gaggtcctga
     4321 gcctcaatta tcagtaacct ttccagctcg cgtacaactc tatattaaat tagcaaaaaa
     4381 tgccaataga gttaataaaa acctggtgtt acctgatgaa tatatcgctc tagagtttaa
     4441 aggtatgagt ggcgcaggag ctatagaagt agacaaaaat ttgaccttca ggattcgtgg
     4501 attaaataat attcatgtcc ttgactgctt tgttaatgtc gcactggaac cagctgatgg
     4561 cgttgttgac tttggtaaaa taaattcccg aacaattaaa aataccagcg ttagtgagac
     4621 gtttagtgta gtcatgacaa aagatcctgg tgcggcctgt actgagcaat tcaatatttt
     4681 agggagcttt ttcactacgg atattttgag tgattatagc catctggata tgggtaatgg
     4741 actgctattg aagatatttc ataaagatgg aacagcaacg gaatttaacc gcttctcaca
     4801 atttgcttct ttttcatcgt ctagtgcacc ttcggtcacc gcaccattca gggcagaact
     4861 tagtgcgaat ccggcagaga ctgttgttga gggaccgttt agtaaagacg tcatcctcaa
     4921 aatcacctat aactagcatc taatacaaac actaaaacgg gccatcaggc ccgttatatc
     4981 agtgctctaa ctccagctct cttgcctgca tcatctgttg acaataccag gcataacgtg
     5041 cgcaaaacca ggttctatgt tcttcatcca tgttaccagt aacggcaaga atatcgaccg
     5101 ggcgaccttc tgcgtgcatt ctggcaaaac tacgcgccag gaaatcgaaa ttatttaaag
     5161 aattaagact atgatccata agcacatcct ccggttatcg catacctttt aaggccatat
     5221 gctttttctg atttcagtat tccccaatca gtgtagtgcc tttaaacata acgtgcg
//
LOCUS       DAPGWB010000232         5196 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.234, whole genome shotgun sequence.
ACCESSION   DAPGWB010000232 DAPGWB010000000
VERSION     DAPGWB010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5196)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5196)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5196
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.234"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            170..376
                     /locus_tag="RHX79_004393"
     CDS             170..376
                     /locus_tag="RHX79_004393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000547968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDV2199484.1"
                     /translation="MYIPQNFLPKSRQKLLRSAPGQSFPSVAVMPLAAKVLKKVMVNT
                     GGNKRQVPAKRQNRGSRNSKDDGG"
     gene            402..941
                     /locus_tag="RHX79_004394"
     CDS             402..941
                     /locus_tag="RHX79_004394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000290791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDV2199485.1"
                     /translation="MAVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDK
                     QTGEMREQTEWHRVVLFGKLAEVAGEYLRKGAQVYIEGQLRTRSWEDNGITRYVTEIL
                     VKTTGTMQMLGRAAGAQTQPEEGQQFSAQPQPEPQSEAGTKKGGAKTKGRGRKAAQPE
                     PQLQPPEGDDYGFSDDIPF"
     gene            1004..1237
                     /locus_tag="RHX79_004395"
     CDS             1004..1237
                     /locus_tag="RHX79_004395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF905 family protein"
                     /protein_id="HDV2199486.1"
                     /translation="MSEYFRILQGLPDGPFTRKHAEAVAAQYRNVFIEDDHGEQFRLV
                     VRNNGAMVWRTWNFEDGAGYWMNHVIRDFGILK"
     gene            1303..3261
                     /locus_tag="RHX79_004396"
     CDS             1303..3261
                     /locus_tag="RHX79_004396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDV2199487.1"
                     /translation="MSVTESKAKTERKSSRKPAKTQETVLSALLAQTEEVSVPLASLI
                     KSPLNVRTVPYSAESVSELADSIKGVGLLQNLVVHALPGDRHGVAAGGRRLAALNMLA
                     ERNILPADWPVRVKVIPQELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQIG
                     DLLGYSPRHVQRMLKLADLAPVILDALAEDRITTEHCQALALENDTARQVQVFEAACQ
                     SGWGGKPEVQTIRRLVTESEVAVAGNTKFRFVGADAFSPDELRTDLFSDDEGGYVDCV
                     ALDAALLEKLQAVAEYLREAEGWGWCAGRMEAVGECREDARAYRNLPQPEAVLTEAEE
                     ERLNELMARYDALENQCEESDLLEAEMKLMRCMAKVRAWTPEMRAGSGVVVSWRYGNV
                     CVQRGVQLRSEDDVADDADRTEQMQEKASVEEISLPLLTKMSSERTLAVQAALMQQPD
                     KSLALLAWTLCLNVFGSGAYSKPAQISLECKHYSLTSDAPSGKEGAAFMALMAEKARL
                     AALLPEGWTRDMTMFLSLSQEVLLSLLSFCTACSLNGVQTRECGHTSRSPLDSLETAI
                     GFHMRDWWQPTKANFFGHLKKPQIIAALNEAGLSGAARDAEKMKKGDAAEHAEHHMKD
                     NRWVPGWMCAPHPQTDTTERTDNLADAA"
     gene            3316..3750
                     /gene="psiB"
                     /locus_tag="RHX79_004397"
     CDS             3316..3750
                     /gene="psiB"
                     /locus_tag="RHX79_004397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000845953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugation system SOS inhibitor PsiB"
                     /protein_id="HDV2199488.1"
                     /translation="MKTELTLNVLQTMSAQEYEDIRAAGSDERRELTHAVMRELDAPD
                     NWTMNGEYGSEFGGFFPVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVV
                     QVQRRFAPEAVSHSLALAASLDAQGYSVSDIIHILMAEGGQA"
     gene            3747..4466
                     /locus_tag="RHX79_004398"
     CDS             3747..4466
                     /locus_tag="RHX79_004398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001763821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid SOS inhibition protein A"
                     /protein_id="HDV2199489.1"
                     /translation="MSARSQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAF
                     FRCLNGSRRISLSDLRFFMPSLTAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAA
                     ERLFPSVRFRVRERSRHKSALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPE
                     TVGSWHARWSDRVAEHDLETLFWQWGERFPSLAGMERWQWQDMPFWQVIAEAGMAARV
                     VGHAVREMERWMVPNKLREAA"
     gene            complement(4478..4666)
                     /locus_tag="RHX79_004399"
     CDS             complement(4478..4666)
                     /locus_tag="RHX79_004399"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="protein sok"
                     /protein_id="HDV2199490.1"
                     /translation="MKINLLRGYLLSATQHGNKPPSRHEAESLKRRAHHSPYTCTLTT
                     LTFPENNPLIQTVHGKSV"
     gene            4746..4904
                     /locus_tag="RHX79_004400"
     CDS             4746..4904
                     /locus_tag="RHX79_004400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HDV2199491.1"
                     /translation="MKLPRSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAA
                     FMAYESGK"
BASE COUNT         1169 a         1365 c         1617 g         1045 t
ORIGIN      
        1 ccggcaaaag gccgccggga tgtaaggggc aacgccgttt cgcaaaccgc gcttcacgtc
       61 gttgcggcgg gtccctgccc gttgttctgt ccggtgccat tcacctgttt aagcccctgt
      121 cgccgggggc aaagacagcc acaaccgtct ccgccagtcc aggggtgaaa tgtacatccc
      181 gcaaaacttt ttgcccaaaa gcaggcaaaa acttttgcgg tctgcccccg gacagtcgtt
      241 tccgtccgtg gcagtgatgc cccttgcggc gaaggttctc aaaaaggtga tggtgaatac
      301 cggagggaac aaaaggcagg tccccgcaaa acgtcaaaac cgcggctccc gaaactcaaa
      361 agatgatggg ggctgaaaac atcaacagaa ggaggcacat catggcagtt cgtggcatta
      421 acaaggtcat tctcgtagga cgcctgggaa aagatccgga agtccgttac atccccaacg
      481 ggggcgcagt ggcaaacctg caggtcgcca cgtcggaaac ctggcgtgac aaacagacag
      541 gggagatgcg ggagcagaca gaatggcatc gcgtggtgct gttcggcaag ctcgcggaag
      601 tggctggcga atatctgcgc aagggcgcgc aggtctacat cgaaggtcag cttcgcaccc
      661 gtagctggga agataacggt atcacccgtt acgtcaccga aattcttgtt aagaccacgg
      721 gcaccatgca gatgctggga cgtgccgcag gtgctcagac tcagccggaa gaggggcaac
      781 agttcagcgc tcagcctcag ccggaaccac agtcggaggc cggtacgaaa aaaggtggcg
      841 caaaaacgaa aggccgtgga cgtaaggccg cgcagccgga gcctcagctg caaccgccgg
      901 agggtgacga ttacgggttt tcagacgata tcccgttctg atcgggctga ctgtgataac
      961 cgccccgccc cgttctgtgc ggggcatcac cggagagatg agaatgagcg aatatttcag
     1021 aatacttcag gggctgcctg acggtccttt tacccgcaaa catgccgaag ctgttgccgc
     1081 acagtaccgg aacgtcttta tcgaggatga ccacggcgaa cagtttcgcc tggttgtccg
     1141 taataacggt gcaatggtct ggcgtacctg gaattttgag gacggtgccg ggtactggat
     1201 gaaccatgtc atcagggatt tcgggattct taagtaagag aggtgccgga cggggacacg
     1261 tccggcagac aatcattatt accgttttgg gaggtactaa ctatgtcagt tacagagtct
     1321 aaggcaaaaa cggagcgtaa atccagccgt aaacctgcaa aaacgcagga aacagtcctg
     1381 tctgccctgc tggcgcagac ggaggaagtg agcgtgccgc tggcctcact gattaaatca
     1441 ccgctgaatg tgcgcacggt gccgtattct gcggagtccg tcagcgaact ggcggactcc
     1501 attaaaggtg tcggcctgtt acagaatctg gttgttcatg ccctgccagg tgaccgccac
     1561 ggtgtcgccg caggtggtcg ccgactggca gcactcaaca tgctggcaga gcgcaacatc
     1621 cttccggcgg actggcctgt ccgtgtgaag gtcattccgc aggaactggc gactgccgca
     1681 tcaatgactg aaaacggtca tcgtcgggat atgcaccctg ccgaacagat tgccggattc
     1741 cgcgcaatgg cgcaggaagg caaaacacct gcacaaatcg gtgatttgct gggctattca
     1801 ccccgccacg ttcagcgaat gctgaaactg gctgaccttg cgcctgtcat cctcgatgcg
     1861 ctggcagaag accgcatcac cacagagcac tgtcaggcgc tggcgctgga gaacgacacc
     1921 gcgcgtcagg tgcaggtgtt tgaagctgcc tgtcagtcgg gatggggcgg aaaaccggaa
     1981 gtacagacca ttcgtcgtct ggtgaccgaa agtgaagtgg cggtggcggg gaacactaaa
     2041 ttccgcttcg tgggggctga tgccttctcg ccagatgaac tgcgcactga tttgttcagc
     2101 gacgatgagg gtggctatgt ggactgtgtt gcgctcgatg ccgccctgct ggaaaaactc
     2161 caggctgttg cagagtacct tcgggaagcc gagggctggg gatggtgtgc cggacgcatg
     2221 gaggccgttg gtgagtgccg tgaagatgcc cgggcatacc gcaacctgcc gcagccggaa
     2281 gcagtgctga cggaggcgga agaagaacgc ctgaacgaac tgatggcacg ttacgacgca
     2341 ctggaaaacc agtgtgagga atccgacctg ctggaagcag aaatgaagct gatgcgctgc
     2401 atggcgaagg tcagagcgtg gacgccggag atgcgtgccg gaagcggtgt ggtggtgtcc
     2461 tggcgttatg gcaacgtgtg tgtccagcgt ggtgtgcagt tgcgcagtga ggatgacgtg
     2521 gctgacgacg ctgaccgcac ggaacagatg caggagaaag cgtcagtgga ggaaatcagt
     2581 ctgccactgc tgacgaaaat gtcttccgaa cgcacgctgg cagtccaggc ggcactcatg
     2641 cagcaaccgg acaaatctct ggcactgctg gcatggacgc tctgcctgaa tgtgtttggc
     2701 agcggagcgt acagtaaacc agcacaaatc agcctggaat gtaaacatta ttcgctgacc
     2761 agcgatgcgc cgtcagggaa ggaaggtgcc gcattcatgg cgctgatggc agaaaaagcc
     2821 cggcttgcag ccctgctgcc ggagggatgg acacgggaca tgacgatgtt cctgtcactc
     2881 agccaggagg tgctgttatc cctgctcagt ttctgtaccg cgtgcagtct taacggtgtc
     2941 cagacccgcg agtgtggtca cacgtcacgc agtccgcttg actcgctgga aaccgctatc
     3001 ggattccaca tgcgcgactg gtggcagccg acaaaagcaa acttcttcgg acacctgaaa
     3061 aagccgcaga ttatcgcagc cctgaatgag gcaggactgt ccggtgctgc acgggatgca
     3121 gagaagatga agaaaggtga tgcggctgaa catgcagagc accatatgaa agacaaccgc
     3181 tgggtgcctg gctggatgtg tgcaccacat ccacagacgg ataccactga acgcaccgat
     3241 aacctggctg atgccgcctg ataaacaacc acaccgcccc gccggagacg gggcggcagc
     3301 aagggagata ccgtgatgaa aactgaactg accctgaatg tattacagac catgagcgca
     3361 caggaatatg aagatatccg ggcagccgga agtgatgaac gtcgtgagct gacacacgcc
     3421 gtgatgcggg aactggatgc gccggacaac tggacgatga acggcgagta cggcagcgag
     3481 tttggcggat ttttccccgt ccaggtccgt ttcacgcctg cccacgaacg tttccacctg
     3541 gcgttatgtt caccgggcga tgtctctcag gtctgggtgc tggttctggt gaatgccggt
     3601 ggtgagccgt ttgcggtggt tcaggtacag cggcggtttg caccggaagc cgtcagccat
     3661 tcactggcac tggcggcgtc actggacgcg caggggtaca gcgtcagtga catcatccat
     3721 atcctgatgg cggaaggagg tcaggcatga gcgcacgttc acaggcactg gttcctctca
     3781 gcacagagca acaggccgca tggcgggcgg tggcggagac cgaaaaacgc cgccatcagg
     3841 gtaacacgct ggctgaatat ccgtatgcgg gggcgttttt ccgctgtctg aacggaagcc
     3901 gcaggatatc gctgtctgac ctgcgatttt tcatgccgtc cctgaccgca gaagaactgc
     3961 acggcaaccg tcttcagtgg ctgtatgcca tcgatgtgct gattgaaaca cagggcgagg
     4021 tctgcctcct tccccttccc ggtgatgcag cagagcgctt gttcccgtcg gtgcggtttc
     4081 gtgtcaggga acgcagtcgc cataaatccg cgctggtcat gcagaagtac agccgccagc
     4141 aggcgaggga ggcagagcag aaagcccgtg cgtaccaggc gctggtcgct caggctgaaa
     4201 tcgaactggc attccattcg ccggaaacag tcggaagctg gcatgcacgc tggagtgacc
     4261 gggtggcaga gcatgacctg gaaaccctgt tctggcagtg gggcgagcgt tttccgtcac
     4321 tggccggaat ggaacgctgg cagtggcagg atatgccatt ctggcaggtc atcgcagagg
     4381 ctggtatggc ggcaagggtg gtcggtcatg ctgttcgtga gatggagcgg tggatggtgc
     4441 cgaacaaact ccgggaggca gcgtgatgcg gcaacaatca cacggatttc ccgtgaacgg
     4501 tctgaatgag tggattattt tcagggaaag tgagtgtggt cagcgtgcag gtatatgggc
     4561 tatgatgtgc ccggcgcttg aggctttctg cctcatgacg tgaaggtggt ttgttgccgt
     4621 gttgtgtggc agaaagaaga tagccccgta gtaagttaat tttcattaac caccacgagg
     4681 catccctatg tctagtccac atcaggatag cctcttaccg cgctttgcgc aaggagaaga
     4741 aggccatgaa actaccacga agttcccttg tctggtgtgt gttgatcgtg tgtctcacac
     4801 tgttgatatt cacttatctg acacgaaaat cgctgtgcga gattcgttac agagacggac
     4861 acagggaggt ggcggctttc atggcttacg aatccggtaa gtagcaacct ggaggcgggc
     4921 gcaggcccgc cttttcagga ctgatgctgg tctgactact gaagcgcctt tataaagggg
     4981 ctgctggttc gccggtagcc cctttctcct tgctgatgtt gtacgggcat gaacaacctg
     5041 acttcaggaa ggtcgtttcc cttcaggaac ggggatgaac gtgcgcctgc ggcgcccgtt
     5101 cttttccccc gccttctctg gttatggcct gtcagaaatc acatcacctt ccctgtgatt
     5161 attctctttt tcttcctgct ctgattctga ctactg
//
LOCUS       DAPGWB010000233         5187 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.235, whole genome shotgun sequence.
ACCESSION   DAPGWB010000233 DAPGWB010000000
VERSION     DAPGWB010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5187)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5187)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5187
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.235"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(139..279)
                     /locus_tag="RHX79_004401"
     CDS             complement(139..279)
                     /locus_tag="RHX79_004401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199492.1"
                     /translation="MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILT
                     AT"
     gene            375..1091
                     /gene="arcA"
                     /locus_tag="RHX79_004402"
     CDS             375..1091
                     /gene="arcA"
                     /locus_tag="RHX79_004402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003621071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HDV2199493.1"
                     /translation="MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILS
                     EYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYK
                     LPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT
                     PEIIATIHGEGYRFCGDLED"
     gene            complement(1151..2503)
                     /gene="creD"
                     /locus_tag="RHX79_004403"
     CDS             complement(1151..2503)
                     /gene="creD"
                     /locus_tag="RHX79_004403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HDV2199494.1"
                     /translation="MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDA
                     IRQSTSGPQKLVGPLIAIPVTELYTVQEEDKTVERKRSFIHFWLPESLMVDGNQNVEE
                     RKIGIYTGQVWHSDLTLKADFDVSRLSELDAPNITFGKPFIVISVGDARGIGVVKAPE
                     VNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLKLNMALNLSGTGDLSVVPAGRNS
                     EMTLTSNWPHPSFLGDFLPAKREVSESGFQAQWQSSWFANNLGERFASGNDTGWENFP
                     AFSVAVTTPADQYQITDRATKYAILLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLV
                     MFYLLLLALSEHIGFTVAWIIASLIGALMNGIYLQAVLKGWRNSMLFTLALLLLDGVM
                     WGLLNSADSALLLGTSVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTMDDQLRIWK
                     "
     gene            complement(2561..3985)
                     /gene="creC"
                     /locus_tag="RHX79_004404"
     CDS             complement(2561..3985)
                     /gene="creC"
                     /locus_tag="RHX79_004404"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     CreC"
                     /protein_id="HDV2199495.1"
                     /translation="MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLID
                     TATLLAELARPDLLSGDPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDSQG
                     KVLFDSANKAVGQDYSRWNDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRL
                     IGVLSVGKPNAAMAPVIKRSERRILWASAILLGIALVIGAGMVWWINRSIARLTRYAD
                     SVTDNKPVPLPDLGSSELRKLAQALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRG
                     AAEILREGPPPEVVARFTDNILTQNARMQALVETLLRQARLENRQEVVLTAVDVAALF
                     RRVSEARTVQLAEKNITLHVTPTEVNVAAEPALLDQALGNLLDNAIDFTPESGRITLS
                     AEVDQEHVTLKVLDTGSGIPDYALSRIFERFYSLPRANGQKSSGLGLAFVSEVARLFN
                     GEVTLRNVQEGGVLASLRLHRHFT"
     gene            complement(3985..4674)
                     /gene="creB"
                     /locus_tag="RHX79_004405"
     CDS             complement(3985..4674)
                     /gene="creB"
                     /locus_tag="RHX79_004405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator CreB"
                     /protein_id="HDV2199496.1"
                     /translation="MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKAR
                     QQVPDVMILDVGLPDISGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYV
                     AKPFSPREVCARVRTLLRRVKKFSSPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEF
                     LLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINT
                     HRGMGYSLRGL"
     gene            complement(4687..5160)
                     /gene="creA"
                     /locus_tag="RHX79_004406"
     CDS             complement(4687..5160)
                     /gene="creA"
                     /locus_tag="RHX79_004406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein CreA"
                     /protein_id="HDV2199497.1"
                     /translation="MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEA
                     FDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGE
                     VVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ"
BASE COUNT         1326 a         1420 c         1222 g         1219 t
ORIGIN      
        1 agttggatta ttaaaataat gtgacgaaag ctagcattta gatacgatga tttcatcaaa
       61 ctgttaacgt gctacaattg aacttgatat atgtcaacga agcgtagttt tattgggtgt
      121 ccggcccctc ttagcctgtt atgttgctgt taaaatggtt aggatgacag ccgtttttga
      181 cactgtcggg tcctgaggga aagtacccac gaccaagcta atgatgttgt tgacgttgat
      241 ggaaagtgca tcaagaacgc aattacgtac tttagtcatg ttacgccgat catgttaatt
      301 tgcagcatgc atcaggcagg tcagggactt ttgtacttcc tgtttcgatt tagttggcaa
      361 tttaggtagc aaacatgcag accccgcaca ttcttatcgt tgaagacgag ttggtaacac
      421 gcaacacgtt gaaaagtatt ttcgaagcgg aaggctatga tgttttcgaa gcgacagatg
      481 gcgcggaaat gcatcagatc ctctctgaat atgacatcaa cctggtgatc atggatatca
      541 atctgccggg taagaacggt cttctgttag cgcgtgaact gcgcgagcag gcgaatgttg
      601 cgttgatgtt cctgactggc cgtgacaacg aagtcgataa aattctcggc ctcgaaatcg
      661 gtgcagatga ctacatcacc aaaccgttca acccgcgtga actgacgatt cgtgcacgca
      721 acctgctgtc ccgtaccatg aatctgggta ctgtcagcga agaacgtcgt agcgttgaaa
      781 gctacaagtt caatggttgg gaactggaca tcaacagccg ttcgttgatc ggccctgatg
      841 gcgagcagta caagctgccg cgcagcgagt tccgcgccat gcttcacttc tgtgaaaacc
      901 caggcaaaat tcagtctcgt gctgaactgc tgaagaaaat gaccggccgt gagctgaaac
      961 cacacgaccg tactgtagac gtgacgatcc gccgtattcg taaacatttc gaatctacgc
     1021 cggatacgcc ggaaatcatc gccaccatcc acggtgaagg ttatcgcttc tgtggtgatc
     1081 tggaagatta atcggcttta ccaccgtcaa aaaaaacggc gctttttagc gccgttttta
     1141 tttttcaacc ttatttccag atacgtaatt gatcgtccat tgtaacttct ttactggctt
     1201 tcattttcgg cagtgaaaac gcataccagt cgatattacg agtcacaaac atcatgccgg
     1261 ccagcgccac caccagcaca ctggttccca acaacagcgc gctatcggca gagttgagca
     1321 gtccccacat cacaccatcc agcaacaaca gcgcgagggt aaacaacatg ctgttgcgcc
     1381 agcctttcaa taccgcctgc aaataaatac cgttcattaa cgccccaatc agactggcga
     1441 ttatccatgc cacggtaaaa ccgatatgtt cagaaagcgc cagcaagagc aaataaaaca
     1501 tcaccaatga aagccccacc agcaaatatt gcattgggtg taaacgttgc gcggtgagcg
     1561 tttcaaaaac aaagaacgcc ataaaagtca gtgcaatcag cagaatggcg tacttagtcg
     1621 cccggtccgt tatttggtat tgatcggctg gcgtcgtcac tgcgacgcta aacgcgggga
     1681 agttttccca gccggtatca ttgcctgaag caaaacgctc accgagatta ttagcaaacc
     1741 agctgctttg ccattgcgcc tgaaaacctg actcgctaac ttcccgtttg gctggcaaaa
     1801 aatcacctaa aaaactggga tgcggccagt tgctggttaa ggtcatttcg ctattacgcc
     1861 cggcaggcac cacagaaaga tcgccggtac cgcttaaatt cagggccata ttcagcttca
     1921 ggttctgctt ccgccagtcc ccttcgggta aagggatatg cacgccctgc ccgccttgct
     1981 ctaacccggt gccgggttca atggtcagcg ccgttccgtt aacttcaggc gctttcacca
     2041 caccaatacc acgcgcatcc ccgacgctaa tcacaataaa tggcttgcca aaggtgatat
     2101 ttggcgcgtc gagttcgcta agacgcgaaa catcgaaatc ggcttttagc gttaaatcac
     2161 tgtgccagac ctgaccggta taaatcccta tcttgcgttc ttccacgttc tgattgccat
     2221 caaccatcaa tgactcaggt aaccaaaaat ggataaaact tcgtttccgc tccacggttt
     2281 tatcctcttc ctgtaccgta taaagctcgg tcacaggaat agcgataagc ggcccaacga
     2341 gtttttgcgg cccgctggta ctttggcgaa tcgcatcttc cacatcgcta cggtaatcgg
     2401 cacgttcgac aatcacctgc cgaatcagca ttatcggaat caacaacagc aatactgcac
     2461 caaacagggt ggtcattttc cagaacaggg gggatttcaa catagtcttc tcctttgcaa
     2521 tggcagcagg atacgaaggc tatgtgggaa gaatttgaag ctatgtgaag tgacggtgaa
     2581 gtcgaagcga ggccagcacg ccaccttcct gcacgttgcg cagcgtgact tcgccgttaa
     2641 acaaacgggc gacctcactg acgaacgcca accccagacc gctgcttttt tgcccatttg
     2701 cacgcggcaa agagtaaaag cgttcaaaaa tacgtgacag cgcgtagtca ggaataccac
     2761 taccggtatc cagcacctta agcgtgacgt gttcctgatc cacttcggcg cttagcgtta
     2821 tacgaccgct ctcgggggta aaatcgatgg cgttatccag taaattcccc agcgcctgat
     2881 ccagtaacgc cggttcagca gcaacattaa cctcggtggg cgtaacatgt agagtgatgt
     2941 ttttttctgc caactgcacg gtgcgcgctt cgctgacgcg gcggaataat gccgccacat
     3001 caacagcagt caaaacgact tcctgacgat tctccagtct tgcctggcgt agtaacgttt
     3061 ccaccagtgc ctgcattcgc gcattttgcg tcagaatgtt gtcagtaaaa cgagccacta
     3121 cttcaggcgg cggaccttcg cgtaaaattt ccgccgcgcc acgaatcgcc gccagtgggc
     3181 tttttagctc atgggttaac gcataaacat actgctcaat atagtttttc ccttccagct
     3241 tcacgcgcat actttccagc gcctgcgcga gtttacgcag ctcgctacta ccgagatcgg
     3301 gaagaggaac gggcttattg tcagtgacgg aatcagcata gcgagtgagc cgggcaatgg
     3361 agcggttgat ccaccaaacc atgcctgcgc caatcaccag tgcgatcccc aacaaaatgg
     3421 cgctggccca taaaattcgc cgctcgctgc gtttaatgac cggagccatc gccgcgttcg
     3481 gtttgcctac gctcaaaacg ccaataagcc gcgagccgtc cataatcggc gcggcaacat
     3541 acatcaccga actttcggga tcggcaggat tttgcaacgt gctgcgcgca ccatactgac
     3601 cacgcaacgt tagccagacg tcattccagc gcgaataatc ctgcccaacg gctttatttg
     3661 ccgaatcgaa caatacttta ccctgcgaat cggtcatata gacatgatat tcattgcgca
     3721 ctttgttaat gccaccgata ttggcgcgaa acgggcgatg ttgtagctga ttaaacgcct
     3781 gcgccagttg cccatgcgtt gggtccccag agagcaaatc gggacgcgcc agctccgcca
     3841 gcaacgttgc ggtgtcgatc aacgtcccct ccgttgctct tcgcacgccc ggtttaactt
     3901 ctttgacaaa aatagccagt acgaaccagg ccgccaccgc caccagtaaa aaatagccca
     3961 gcagcaaccg catgccgata cgcattacag gcccctcagg ctatatccca tgccgcgatg
     4021 agtattaatc ggtgaaagat cggggttgat ggcgcgcagc ttggcacgca acgttttaat
     4081 gtgggtatca acggtgcgat cgtaggtgtc ctgcgcatct tcccacacgc tatccatcag
     4141 ttgctggcgg gaccagacgc ggcctggcga cttgagtaac gtcttcagca ataaaaactc
     4201 ataccgcgtc agcgttaatg gcgtgtcaaa ccagctgatc tgcgccgcgg gttcattcaa
     4261 ttcaaaatga ccaatacgga tgacgggaga cggcgacgag aacttcttca cccgacgcag
     4321 taaggtgcgc accctggcgc acacttcgcg gggtgaaaac ggtttagcca catagtcgtc
     4381 agcgccaatt tccagcccaa gcaggcgatc gacctcttca cttcgggccg tcaggaacag
     4441 tacaggtaac gccggatgga gcgccagtaa ctggcggcac aattcaaagc cactgatatc
     4501 aggcaaacca acgtcaagaa tcatgacgtc gggaacctgc tggcgagctt tatccagcac
     4561 cggcaaacct cgctcaaaga cctcgacggc aaaaccttcc tgctgcaaca tgtagaccag
     4621 cgtgtcggct atcccttgct catcttccac taaccagacc gtttcccgtt gcataaatcg
     4681 cctctgttat tgccgccacg gcatgacagg aaccgcgcta atcgcgtttt tcggcgaacc
     4741 ttctacaact ttgtcggagt aagccagata agcgagcgcg ttgcgtttgg cgtcataaaa
     4801 gcgcacgacc tgtaacgact taaagaccag ggacgtgcgt tttttgaata ctacctcgcc
     4861 ctgagctttg ccgtttttaa tacgatccga cagttcaatc ggcccgactt gctgacaaga
     4921 aatggccgca tcggaggtat cttctgccag gcccaatccc cctttaatac caccggtttt
     4981 cgcccggctc acataacagg tgacattttt cacatcggga tcgtcaaagg cttccacaac
     5041 aattttgtga tccgggccga tcattttaaa tacggtgtcg accgaaccaa tctcttctgc
     5101 atgagccaat ggccccagca ttatcaggct taaagacagg atcaaatgct tgtatttcat
     5161 attgttacca tttttatcta ttacacg
//
LOCUS       DAPGWB010000234         5151 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.236, whole genome shotgun sequence.
ACCESSION   DAPGWB010000234 DAPGWB010000000
VERSION     DAPGWB010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5151
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.236"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            240..806
                     /locus_tag="RHX79_004407"
                     /pseudo
     CDS             240..806
                     /locus_tag="RHX79_004407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310139.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
     gene            805..2994
                     /locus_tag="RHX79_004408"
                     /pseudo
     CDS             805..2994
                     /locus_tag="RHX79_004408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310137.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
     gene            3008..3538
                     /locus_tag="RHX79_004409"
     CDS             3008..3538
                     /locus_tag="RHX79_004409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDV2199498.1"
                     /translation="MKYNNVIFLGLCLGLTTYSALSADSVIKISGRVLDYGCTVSSDS
                     LNFTVDLQKNSARQFPTTGSTSPAVPFQITLSECSKGTTGVRVAFNGIEDAENNTLLK
                     LDEGSNTASGLGIEILDGNMRPVKLNDLHAGMQWIPLVPEQNNILPYSARLKSTQKSV
                     NPGLVRASATFTLEFQ"
     gene            3551..4054
                     /locus_tag="RHX79_004410"
     CDS             3551..4054
                     /locus_tag="RHX79_004410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HDV2199499.1"
                     /translation="MKRLHKRFLLATFCALFTATLQAADVTITVNGRVVAKPCTIQTK
                     EANVNLGDLYTRNLQQPGSASGWHNITLSLTDCPVETSAVTAIVTGSTDNTGYYKNEG
                     TAENIQIELRDDQDATLKNGDSKTVIVDEITRNAQFPLKARAITVNGNASQGTIEALI
                     NVIYTWQ"
     gene            4114..5028
                     /locus_tag="RHX79_004411"
     CDS             4114..5028
                     /locus_tag="RHX79_004411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2199500.1"
                     /translation="MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYV
                     NLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNN
                     VTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATL
                     GSGNPRNFTWNIISNNSVVMPTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLS
                     FYLSGATTDSARQVFANTAPDATKASGVGVSLMRNGKILATGENVSLGTVNKSKVPLG
                     LSATYGQTGNKVSAGTVQSVIGVTFIYE"
BASE COUNT         1491 a         1110 c         1147 g         1403 t
ORIGIN      
        1 ggagcactat gaaaaatcac ataatatcta aacgatcaat aaacaacagt agttaaactt
       61 actgttattt aaaatattta ctttgtagca aggttttcct attaaaagag aaccaacatt
      121 tattacaaac gcattaagtc tggaaacccg gcgactcgcc aatgtattag caacatttat
      181 cgattgtctg atgtaacggt tttcccgctt atcctcttaa cacatggaga atgcatcaga
      241 tgcaaactac gcgtaccccc tactctattt cctttatggc gacagtgtta cttttattgc
      301 tctttgcttg ccatagcacc gttgccaacg cagctgtcgc actgggtgcg acgcgggtaa
      361 tttatccggc aaaccagaaa caggttttat tgcctgtcac gaataatgat cctgccagtg
      421 tctatctcat tcagtcatgg atagaaaatg caggtgacca aaaagacacc cagtttgtca
      481 ttaccccacc gcttttttcc atgcaaggta aaaaagagaa tacgctgcgg ataatcaacg
      541 ctactaatca tcagttacca ggcgaccgtg aaagcctgtt ctgggtgaat gttaaagcta
      601 ttcctgctat ggaaaaagac cagaagaatg agaatacatt acagctggca attattagcc
      661 gcataaaaat gttttatcgc cccacgaacc tggcaatggc acctgaagaa gcgcctgcaa
      721 tgcttcggtt tcgtcgcagc ggtagcaaac tcacgcttat taatccaacg ccctatttca
      781 ttaccgtaac aaatatgaaa gcaggagcaa catttgtcac tctccgttcc gcaaatttat
      841 gttggcagaa tggctcgcgg ctatgtttct cctgatctgt gggaagaagg aataaatgct
      901 gggcttctaa actatagttt taatggtaat tctattaata atcgtagtaa ccataatgca
      961 ggaaaatcca actatgcata tttgaattta cagagtggca tcaacattgg tagttggcga
     1021 ctgcgcgata actcaacgtg gagttattac agtgggagta gcaattcatc tgacagcaat
     1081 aaatggcagc atatcaatac gtcggctgaa cgtgacatta ttcccttacg ctcacggtta
     1141 acggtaggtg atagttatac cgatggcgat atttttgata gtgtgaactt tcgtggcctc
     1201 aaaataaatt caacagaagc gatgttgccc gatagccaac atggtttcgc tccggtgatt
     1261 catggtattg cccgtggcac cgcacaagtg agtgtaaaac agaacggata cgatgtttat
     1321 cagactactg ttccacccgg cccttttact attgatgata tcaactctgc cgccaatggt
     1381 ggtgatctgc aagtaaccat aaaagaggca gacggcagta ttcagacatt atatgttcct
     1441 tattcgtctg ttccggttct ccaacgtgtt ggatatacgc gttatgcgct tgccatgggg
     1501 gaatatcgta gtggaaataa cctgcaaagc tcccccaagt tcatacaagg tagcttgatg
     1561 catggactgg aaggaaactg gacaccttat ggcggaatgc aaattgcaga agattatcag
     1621 gccttcaacc ttggtattgg taaagattta ggactttttg gtgccttttc tttcgatatc
     1681 acgcaggcca atacgacact tgcagatggc acccgtcaca gggggcaatc ggttaaatcc
     1741 gtctacagca aatccttcta ccagacagga accaatatcc aggtcgcagg atatcgctat
     1801 tctacgcaag gtttttataa cttatccgac agtgcctaca gtcgaatgag tggttacacc
     1861 gttaagcctc ctaccggaga cagcaatgag cagacacaat ttattgatta ttttaatctg
     1921 ttctacagta agcggggtca ggaacaaata agcatctctc agcagcttgg aaattacggt
     1981 acgacatttt tcagtgccag tcgccaaagt tactggaaca cgtcacgcag cgaccagcaa
     2041 atatcatttg gattaaatgt gccgtttggt gatataacgg cttcgctgaa ttacagctat
     2101 tccaataata tatggcaaaa cgatcgggat catttactcg cttttacgct taatgttccc
     2161 ttcagtcatt ggatgcgtac agacagtcag tcggcatttc gtaattcaaa cgccagttac
     2221 agtatgtcaa acgatttgaa aggcggcatg accaatctat cgggggttta tggcactctg
     2281 ctgccggata ataacctgaa ttatagcgtt caggtcggta acacccacgg aggtaataca
     2341 tcgtctggca ccagtggtta cagttctctt aattatcgtg gagcttacgg taatacgaat
     2401 gtcggttaca gtcggaatgg tgacagcagc cagatttatt acggaatgag tggtgggatt
     2461 attgctcatg ctgatggcat cacctttgga cagccgctgg gcgacacaat ggttctggtt
     2521 aaggctcctg gcgctgataa tgtcaaaata gagaaccaga ccggaattca taccgactgg
     2581 cgtggctatg caatattacc atttgcgaca gaatatagag aaaatcgtgt cgctcttaac
     2641 gcgaattccc ttgcagataa tgttgaactg gatgaaaccg tagtcactgt catcccaact
     2701 cacggtgcta ttgccagagc aacatttaat gcacaaatcg gcgggaaagt attaatgacg
     2761 ttgaagtacg gtaataaaag cgttccattc ggtgcaattg tcactcacgg agagaataaa
     2821 aatggcagca ttgtcgcgga aaatggtcag gtttatctga ctggacttcc acagtcaggg
     2881 aaattacagg tttcatgggg caatgataaa aactcaaact gtattgtcga ttacaagctt
     2941 cctgaagtct ctcctggaac cttgctgaac cagcagacag caatctgtcg ctaaggaaca
     3001 atagattatg aaatacaata acgttatttt cctcggttta tgtctggggt taaccaccta
     3061 ttctgcttta tccgcagata gcgttattaa aattagcggg cgcgtcctcg attatggctg
     3121 cacagtctca tcggattcgc ttaattttac cgtagatctc caaaaaaaca gtgccagaca
     3181 atttccaacg accggtagca caagtccagc cgtccctttt cagattacgt taagtgaatg
     3241 cagcaaaggg acaacggggg ttcgggttgc atttaacggt attgaggatg cagaaaataa
     3301 tactctgttg aaactggatg agggaagcaa tacggcctcc ggtttaggta tagaaatact
     3361 ggacggaaat atgcgtccgg tgaaactgaa tgaccttcat gccgggatgc agtggatccc
     3421 actggtacca gaacagaaca atattttgcc ttactccgct cgtctgaagt caactcagaa
     3481 gtccgtcaat ccgggactgg tgagggcttc ggcaaccttt acccttgaat ttcaataatc
     3541 agagtcagat atgaaaagac ttcacaagag gttcctgtta gctacgtttt gcgcgttatt
     3601 cacagcaact ctccaggccg ccgatgtcac tatcactgtt aatggtcggg tagtcgctaa
     3661 accctgcact attcaaacca aagaagctaa cgttaatctc ggggatcttt atacgcgcaa
     3721 tctgcaacaa cctggttctg catctggctg gcacaatatt actttgtcat taaccgattg
     3781 tccggttgaa acaagtgcag tgacggcaat cgtgacaggt tcaactgaca atacgggtta
     3841 ttacaaaaat gaaggtactg ccgaaaatat tcagatagag ctgagggatg accaggatgc
     3901 gacgttaaaa aatggcgata gcaaaacggt tattgttgat gagatcactc gtaatgcaca
     3961 gtttccactt aaggcaagag ctatcacggt gaatggaaac gcaagccagg gaacgatcga
     4021 ggcgctaatc aatgtgatct acacctggca ataacgtcga ttcgattttc ttagccttct
     4081 ttttaaatca attttttaac cttaggatat atcatgggta aaacaatcag tataaaggtc
     4141 ctgttcggta tttatcttct attaatggca ggtaaagttt ttgccttcag ttgtaatgtc
     4201 gatggcgggt caagtattgg agctggtaca acctctgttt atgttaatct cgaccctgta
     4261 atacagccgg gccagaatct ggttgtagac ttgtctcagc atataagttg ctggaatgat
     4321 tacggcggct ggtacgacac tgatcatata aacctggtac aaggctcagc tttcgcaggc
     4381 tctctacagt catataaagg atcgctgtac tggaataatg tgacctaccc cttcccgttg
     4441 acgacaaata ccaacgtatt ggatattggt gataagacac cgatgccatt accgttaaaa
     4501 ctctatatta ccccagtcgg ggcggccggt ggagttgtca taaaagccgg ggaagttatt
     4561 gcccgtattc atatgtataa aattgcaaca ttaggaagcg gaaatccgcg taattttacg
     4621 tggaatatta tttcaaataa cagtgttgtt atgccaacag gcggctgcac tgttgatagt
     4681 cgtaatgtca ccgtggatct cccggacttt cctggaagcg cagaaatacc ccttggcgta
     4741 tattgctcaa gcgaacaaaa gctctcattt tatctttcgg gtgccaccac tgacagtgcc
     4801 cgacaagtgt ttgctaacac agcacctgat gcaacaaaag catcgggagt gggtgtctct
     4861 ctgatgcgta atggaaaaat actggctacg ggagaaaatg tctccctggg aacagtaaat
     4921 aaaagcaaag tacctctggg tttaagcgca acctatggac aaacaggaaa caaggtttca
     4981 gccggaaccg tccagtcagt cattggtgtc acttttatct atgaataatt gtgattttga
     5041 tcttagtcta tgcgctccat tcacgaaaat tgcgcggata attattttgt aaaggctatt
     5101 atcctacacc tgtaagaaaa tccgcgcaca attgaagcca gagtcttatt t
//
LOCUS       DAPGWB010000235         5142 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.237, whole genome shotgun sequence.
ACCESSION   DAPGWB010000235 DAPGWB010000000
VERSION     DAPGWB010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5142
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.237"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(80..2071)
                     /gene="tkt"
                     /locus_tag="RHX79_004412"
     CDS             complement(80..2071)
                     /gene="tkt"
                     /locus_tag="RHX79_004412"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDV2199501.1"
                     /translation="MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDF
                     LKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPE
                     VGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMME
                     GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDG
                     HDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQ
                     LGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMP
                     SDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSG
                     SKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAAL
                     MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVE
                     RQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVA
                     AYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVG
                     LNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL"
     gene            2349..3107
                     /gene="loiP"
                     /locus_tag="RHX79_004413"
                     /gene_synonym="yggG"
     CDS             2349..3107
                     /gene="loiP"
                     /locus_tag="RHX79_004413"
                     /gene_synonym="yggG"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease LoiP"
                     /protein_id="HDV2199502.1"
                     /translation="MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQ
                     VKALSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAF
                     AMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHLALGHVKKGMQVALGTNAVRVAAASA
                     GGIVGSLSQSQLGDLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLA
                     KLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK"
     gene            complement(3313..4233)
                     /gene="speB"
                     /locus_tag="RHX79_004414"
     CDS             complement(3313..4233)
                     /gene="speB"
                     /locus_tag="RHX79_004414"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HDV2199503.1"
                     /translation="MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDM
                     ATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMS
                     EKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCE
                     FDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDIDNGFTVLDACQVNDRSVDDVIAQVKQ
                     IVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVA
                     PAYDQSEITALAAATLALEMLYIQAAKKGE"
     gene            complement(4369..5100)
                     /locus_tag="RHX79_004415"
     CDS             complement(4369..5100)
                     /locus_tag="RHX79_004415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199504.1"
                     /translation="MKKWKVRSALVALIVLLAGCSSNAQYNSSASGNVGTAWGGDVHS
                     TVQGVSAERAWRDPAEMIVISYSTNVPSGYDRVYSIRINELEYAIRDGNFNSLPITRV
                     YDSSNNEPRYIVHARVGMNYQLYVRNYSRNTNYEIVATVDGLDVLNGKQGSLNNNGYI
                     VNAGDSLAIKGFRKDKHTEAAFQFANVVDSYAANSAQGDVRNTGVIGFAAFELQGPAQ
                     NALPPCSGQAFPADNNGYAPPPCRK"
BASE COUNT         1225 a         1377 c         1366 g         1174 t
ORIGIN      
        1 atctattgct tgtccgcaaa cggacatatc aaggtaataa aaaaggtcgc cgaagcgacc
       61 tttttacccg aaatgctaat tacagcagtt cttttgcttt cgcaacaacg ttatcaacag
      121 tgaagccgaa ctcttcaaac agcagctctg ccggagcaga ttcaccgaaa gtggtcatac
      181 cgacgatagc accgttcagg ccaacatact tgtaccagta gtcagcaata cccgcttcta
      241 cagcaacgcg tgcagtaacc gctttcggca gtacggattc acggtaagca gcatcctgct
      301 tgtcaaatgc gtcggtagac ggcatggaca ccacgcgcgc tttcacgcct tcggcagtca
      361 gtttttcgta ggcagcaaca gccagttcaa cttctgaacc ggtagcgatg aaaatcagtt
      421 ccggctgacc ggcgcagtct ttcagcacat aaccaccgcg cgcgatgttt gccagttgct
      481 cttcagttcg ttcctgctgc gccaggttct gacgggagag gatcagtgcg gtcgggccgt
      541 cctgacgctc aacaccgtat ttccacgcga ccgcggattc aacctggtca cacggacgcc
      601 atgtagacat gttcggggtt acgcgcagag aagcgacctg ctctaccggc tggtgagtcg
      661 ggccatcttc gcccagaccg atggagtcgt gggtgtaaac catcacctga cgctgtttca
      721 tcagcgcagc catacgtacg gcgttacgtg cgtattccac gaacatcagg aaggtggagg
      781 tgtacggcag gaaaccaccg tgcagggaga taccgttagc aatcgcggtc ataccgaact
      841 cgcgaacacc gtagtggatg tagttacccg cagcatcttc gttgattgct ttagaaccag
      901 accacagggt caggttagac ggtgccaggt cagcagaacc gccgaggaat tccggcaaca
      961 gcggaccgaa agcttcgata gcattctgag acgctttacg gctggcgatt ttcgccgggt
     1021 tagcctgcag tttagcaatg aactcttttg ctttcgcgtc gaagtcagac ggcatttcgc
     1081 ctttcatacg gcgggtaaat tcagcggctt cctgcggata agctttcgcg taagcagcga
     1141 atttctcgtt ccatgcggat tctttcgcct ggcctgcttc tttcgcatcc cactgagcat
     1201 agatttcaga cgggatttcg aacggtgcat atttccagcc cagctgttcg cgggtcaggg
     1261 caatttcagc gtcgcccagc ggcgcaccgt gggagtcgtg agtaccggct ttgttcgggg
     1321 aaccgaaacc gatgatggtt ttgcacatca gcagggacgg tttgtcagtc actgcgcgcg
     1381 cttcttctac tgcgcgtttg atggatgccg cgtcatgacc gtcgatgtcg cgaataacgt
     1441 gccagccgta agcttcgaaa cgcattgcgg tgtcgtcggt gaaccagcct tcaacgtgac
     1501 catcaataga gataccgttg tcatcgtaga acgcaatcag tttacccagc ttcagcgtac
     1561 ccgccagaga gcaaacttcg tgggagatgc cttccatcat gcagccgtcg cccatgaagg
     1621 cataggtgta gtggtcgaca atgtcgtggc ccggacggtt aaactgcgcc gccagcgttt
     1681 tttctgcaat cgccataccg actgcgttgg caataccctg acccagcgga ccggtggtgg
     1741 tttccacacc agcggtgtaa cccacttccg ggtgacccgg agttttagag tgcagctgac
     1801 ggaagttttt cagttcttcc atcggcagat cgtaaccggt gaggtgcagc aggctgtaga
     1861 tcagcatgga gccgtggccg ttggacagca cgaagcggtc acggtcagcc caggacggat
     1921 tctgcgggtt gtgtttcagg aaatcacgcc acaggacttc ggcaatgtca gccataccca
     1981 taggggcacc cgggtgaccg gatttggctt tctgtactgc gtccatgctc agcgcacgaa
     2041 tagcattggc aagctcttta cgtgaggaca ttttgactcc agatcggatg atgaagggca
     2101 cgcccttaac gacttgacga cagcgcgttt tgggctacgc cggaaaattt gccaacaatt
     2161 taccgcaagc cgcgcgtcat gtacatggaa catccttttg ccgcttcaga aatctctgga
     2221 tcatgctcgc atgttgcgca atctactcgc ccgtccgctg cgcttttcct tatactgaga
     2281 ctgagcgtcg attcacctgc aaacggcgca tttttagaat aatcctgacc ttgtgcggaa
     2341 gagaaaacat gaaaattcgc gccttattgg tagcaatgag cgtggcaacg gtactgaccg
     2401 gttgccagaa tatggactcc aacggactgc tttcatcagg agcggaagct tttcaggctt
     2461 acagtttgag tgatgcgcag gtgaaagccc tgagcgatca ggcatgtcag gagatggaca
     2521 gcaaggcgac gattgcgcca gccaatagcg aatacgctaa acgtctgaca actattgcca
     2581 atgcgctagg caacaatatc aacggtcagc cggtgaatta caaagtgtat atggcgaagg
     2641 atgtgaacgc ctttgcaatg gctaacggct gtatccgcgt ctatagcggg ctgatggata
     2701 tgatgacgga taacgaagtc gaagcggtga tcggtcacga gatggggcac ttggcgttag
     2761 gccatgtgaa gaaagggatg caggtggcgc ttggtacaaa tgccgtgcga gtagctgcgg
     2821 cctctgcggg cgggattgtc ggcagtttat ctcaatcaca acttggtgat ctgggcgaga
     2881 aattagtcaa ttcgcaattc tcccagcgcc aggaagcaga agccgatgat tattcttacg
     2941 atcttctgcg ccaacgcggc atcagcccgg caggtcttgc caccagcttt gaaaaactgg
     3001 cgaaactgga agaaggccgc caaagctcaa tgtttgacga ccatcctgca tccgccgaac
     3061 gcgcccagca tattcgcgat cgcatgagcg cggatgggat taagtaaagc ctggtggtgt
     3121 cgaacgtagg tcagataagg cgttcacgcc gcatctgaca tgaatggcac atttgttacc
     3181 ttgtgcgcat tgccggatgc gatgctggcg catcttatcc ggcctacggg tgccgaacgt
     3241 aggtcggata aggcgttcac gccgcatccg acattaatgg cacgttttac ccgtgcgcat
     3301 cgcatctggt gcttactcgc cctttttcgc cgcctgaata tacagcatct ccagcgccag
     3361 cgtcgccgca gccagagcgg tgatttccga ctgatcatat gccggagcca cttccactac
     3421 gtccatccca acgatgttga gatctttcag gccgcgtacc agtttaatag cgcgatcgga
     3481 ggtcaggccg ccaatcactg gcgtaccggt gcctggtgca aaagcaggat ccaggcagtc
     3541 gatatcaaag gtcaggtaaa ccggcatatc acccacaatc tgtttcacct gggcgataac
     3601 gtcatccacg ctgcgatcgt tcacctggca ggcgtccagc acggtaaagc cgttgtctat
     3661 atcaaactcg gtacgaatac caatctgcac ggaatgattc gggtcgatca gaccttcttt
     3721 cggcgcggta tagaacatgg tgccgtggtc aaattcacaa ccgttcgcat aggtatcggt
     3781 gtgggcgtca aagtgtacca gcgccatttt accgaaatgc ttcgcatgag cacgcagcag
     3841 cggcagcgta acaaagtggt caccaccgaa ggagagcata cgcttaccgg cagccagcag
     3901 cttctcggcg tgcgcctgca gcttctcgct catctcacgg gcatcgccga aagcatatac
     3961 cagatcaccg cagtccacga cgttcagacg ctcacgcatg tcgaaattcc acgggaagcg
     4021 attgtgttcc caggccagat tcgtcgaaac ctgacggatc gctgccggac cgtggcgacc
     4081 accggcacgg ccagaggtgg ccatgtcgaa cggcacacca gtaatcaccc agtcagcatc
     4141 gctgtcatac ggctggaagt tcatcggcag gcgtaaaaaa ccaaaggcgt tggaaaccag
     4201 tgagttatcg tattgatgac ctaaggtgct catggatgga ctcctattac aaagtcgata
     4261 taaaaaaacc cttccgcgtc gttaggcccg acgaggaagg gttggatttg cgaaacacaa
     4321 gtttgtgcta attatcgcct taaatgggcg aggcatcaag cgaggttgct atttccgaca
     4381 cggtggcggc gcatagccat tgttatctgc tggaaaagct tgtccagagc acggtggcag
     4441 cgcgttttgc gccgggcctt gtaattcaaa ggcggcaaag ccgattaccc cggtattacg
     4501 cacatcgcct tgcgccgaat tggctgcgta ggaatcaaca acgttggcga actgaaaagc
     4561 cgcttcggta tgtttatctt tgcggaatcc tttaatcgct aacgaatctc cggcattcac
     4621 aatatagccg ttgttattca gcgaaccttg cttgccgttc agcacatcca ggccatcaac
     4681 cgtagcaacg atctcgtagt tggtgttacg actgtaatta cgaacatata attgataatt
     4741 cattccgact ctggcatgga caatatagcg tggttcatta ttggatgaat cataaacacg
     4801 cgtaataggt agagaattaa aattaccatc gcgaatagca tattccagtt cgttaatacg
     4861 aatgctataa acgcggtcgt agccggaagg aacattagtc gaataactaa taacgatcat
     4921 ctccgccgga tcgcgccagg ctcgctcagc agatacgccc tgaaccgttg agtgcacatc
     4981 cccaccccag gcggtgccga cattacccga tgcactgcta ttatactgcg cattactgga
     5041 acaaccggcc agcagcacga ttaatgccac caacgcgcta cgtactttcc attttttcat
     5101 aaccgttccc tctgcattta attaatgcag cgattgtagg ga
//
LOCUS       DAPGWB010000236         5125 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.238, whole genome shotgun sequence.
ACCESSION   DAPGWB010000236 DAPGWB010000000
VERSION     DAPGWB010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5125
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.238"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(242..1099)
                     /gene="repA"
                     /locus_tag="RHX79_004416"
     CDS             complement(242..1099)
                     /gene="repA"
                     /locus_tag="RHX79_004416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="incFII family plasmid replication initiator
                     RepA"
                     /protein_id="HDV2199505.1"
                     /translation="MTDLHQTYYRQVKNPNPVFTPREGAGTLKFCEKLMEKAVGFTSR
                     FDFAIHVAHARSRGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSITTLAIECG
                     LATESAAGKLSITRATRALTFLSELGLITYQTEYDPLIGCYIPTDITFTSALFAALDV
                     SEEAVAAARRSRVVWENKQRKKQGLDTLGMDELIAKAWRFVRERFRSYQTELKSRGIK
                     RARARRDADRERQDIVTLVKRQLTREIAEGRFTANREAVKREVERRVKERMILSRNRN
                     YSRLATASP"
     gene            complement(1092..1166)
                     /gene="tap"
                     /locus_tag="RHX79_004417"
     CDS             complement(1092..1166)
                     /gene="tap"
                     /locus_tag="RHX79_004417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001370046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepA leader peptide Tap"
                     /protein_id="HDV2199506.1"
                     /translation="MPGKVQDFFLCSLLLRIVSAGWCD"
     gene            complement(1404..1658)
                     /gene="repA"
                     /locus_tag="RHX79_004418"
     CDS             complement(1404..1658)
                     /gene="repA"
                     /locus_tag="RHX79_004418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication regulatory protein RepA"
                     /protein_id="HDV2199507.1"
                     /translation="MSQTENAVTSSSGAKRAYRKGNPLSDAEKQRLSVARKRASFKEV
                     KVFLEPKYKAMLMQMCHEDGLTQAEVLTALIKSEAQKRCM"
     gene            complement(1898..2488)
                     /locus_tag="RHX79_004419"
     CDS             complement(1898..2488)
                     /locus_tag="RHX79_004419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HDV2199508.1"
                     /translation="MKLIIFILIVLIIAALLIRIILRSVNQHSPLLMQLHAAGIRTGD
                     AERILSGGEYWQRQKTLLTEREVSFMKGLFRIVDMKRWYLCPQVRVADIVQLNGNIRP
                     RSRQWWQLFRMVSQWHVDVVIVERRSFSIVAAVELDDASHLRPERRRRDILLEEVLRQ
                     AGIPLLRSHDARKLLQMTGEWLNTTGADQQSPEHRS"
     gene            complement(2526..2735)
                     /gene="hha"
                     /locus_tag="RHX79_004420"
     CDS             complement(2526..2735)
                     /gene="hha"
                     /locus_tag="RHX79_004420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HDV2199509.1"
                     /translation="MAKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLLNSERESFNSAA
                     DHRLAELITGKLYDRIPKEIWKYVR"
     gene            complement(2781..3242)
                     /locus_tag="RHX79_004421"
     CDS             complement(2781..3242)
                     /locus_tag="RHX79_004421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDV2199510.1"
                     /translation="MRKYIPLVLFIFSWPVLCADIHGRVVRVLDGDTIEVMDSRKAVR
                     IRLINIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNVN
                     QFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSDADPVPPWIWRHRK"
     gene            complement(3487..3699)
                     /locus_tag="RHX79_004422"
     CDS             complement(3487..3699)
                     /locus_tag="RHX79_004422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001369432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDV2199511.1"
                     /translation="MNGTGRDSQNSGVWRYRQVGRRAVRLEVRGDWPGAAEAWLRAAQ
                     SAPRTDWQQFARKRAEHCHRRCRGRV"
     gene            complement(3828..4388)
                     /locus_tag="RHX79_004423"
     CDS             complement(3828..4388)
                     /locus_tag="RHX79_004423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fertility inhibition protein FinO"
                     /protein_id="HDV2199512.1"
                     /translation="MTEQKRPVLTLKRKTEGETPTRSRKTIINVTTPPKWKVKKQKLA
                     EKAAREAELTAKKAQARQALSIYLNLPTLDEAVNTLKPWWPGLFDGDTPRLLACGIRD
                     VLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEV
                     YAAERLDKIRRQNRIKAELQAVLDEQ"
     gene            complement(4491..>5125)
                     /locus_tag="RHX79_004424"
     CDS             complement(4491..>5125)
                     /locus_tag="RHX79_004424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDV2199513.1"
                     /translation="AMQTEDIISVINWAEKQECIDNQRIGLWGTSLGGGHVFSAAAQD
                     QRVKCIVSQLAFADGDVLVTGEMNESERASFLSTLNKMAEKKKNTGKEMFVGVTRVLS
                     DNESKVFFEKVKGQYPEMDIKIPFLTVMETLQYKPAESAAKVQCPVLIVIAGQDSVNP
                     PEQGKALYDAVASGTKELYEEADACHYDIYEGAFFERVAAVQTQWFKKHL"
BASE COUNT         1194 a         1373 c         1137 g         1421 t
ORIGIN      
        1 atggcgcttt atgacatgaa cggttgtaac cttatgggga agtcccttgc agtttaatgt
       61 ggataagcaa aattccccgt ctgtgaggcg tgttttgtat cgaaaacagg gggggccgga
      121 tgcaccagaa gctggatgat gaggttgttt tttgtatgtg gtgctgattt tttgtgcgct
      181 gtcgggcttc agacgtgcgg aagcctccgg cgcaggccgg attattcaga ggaggtcact
      241 ttcaggggga agctgtggcc agccggctgt aattacggtt acgtgacaga atcatgcgct
      301 ccttcacacg acgctcaact tcgcgtttta ccgcctcacg attggcagtg aagcgccctt
      361 ccgcgatttc gcgcgtcagc tgccgtttca ccagggtgac aatatcctga cgttccctgt
      421 ccgcatcacg acgcgcacgg gcacgcttta ttccccggga cttaagctct gtctgataac
      481 tgcgaaaacg ctcacgaaca aaacgccagg ctttcgctat cagttcatcc atgcccaggg
      541 tatccagccc ctgctttttg cgttgtttgt tttcccatac cacacggctg cggcgcgcgg
      601 cggccactgc ctcctctgat acatcgaggg cagcaaacag tgcagatgtg aacgtgatat
      661 cggtcggaat gtagcacccg ataagcgggt catattccgt ctggtaggta atcagtccca
      721 gctctgacag gaacgtcagg gcccgggtgg cacgggtgat ggagagtttt ccggcagcag
      781 actccgtcgc cagtccgcac tcaatggcca gcgtggtgat ggagcactgg acgcggttgg
      841 ccagcgggtc atagtggaaa cacagcccct gcaggagcgc atcaatagcc cgtcgacgca
      901 gcactggtgg catgcgtcga cgcagaccac gcgaacgggc atgcgccaca tgaatggcga
      961 aatcaaaacg ggaagtgaag cccaccgcct tttccatcag tttttcgcag aacttcagcg
     1021 ttcctgcacc ttcacggggt gtaaacaccg gattcgggtt ctttacctgg cggtaatacg
     1081 tttggtgaag atcagtcaca ccatcctgca cttacaatgc gcagaaggag cgagcacaga
     1141 aagaagtctt gaacttttcc gggcatataa ctatactccc cgcatagctg aattgttggc
     1201 tatacggttt aagtgggccc cggtaatctt ttcgtactcg ccaaagttga agaagattat
     1261 cggggttttt gcttttctgg ctcctgtaaa tccacatcag aaccagttcc ttgccacctt
     1321 acggcgtggc cagccacaaa attccttaaa cgatcagtaa tctagcacta atcttctgaa
     1381 cactcaagaa tgtaagccca tcatcacatg catcgttttt gcgcttcact ttttatcagt
     1441 gcggtcagaa cttcagcctg agtcagacca tcttcatgac acatttgcat gagcatggcc
     1501 ttatactttg gttcaagaaa tacttttact tccttgaacg aagctctttt acgggccact
     1561 gataatcttt gtttctctgc atcagaaagc ggattcccct ttctgtatgc tcgttttgcg
     1621 ccagatgagg aagtcactgc attttctgtc tgcgacatct cgcctcctca atactcaaac
     1681 agggatcgtt tcgcagagga tactacagtt ttttgaaatc agcgacttga gaattgtgac
     1741 gaagatctgt gttggcgcac aaatcaacgg ggattactgt cgtttaatgt gatttaaact
     1801 gtgaaatagt atggttttca gttattgaaa cgccgggagc ggggaaaact tgctttttcc
     1861 cgtttccggg gttggacaac tgagcaacgc gaaggcgtca gctacgatgt tccggggact
     1921 gctgatcagc ccctgttgta ttcagccatt ctccggtcat ctgcagcagt tttctggcat
     1981 cgtggcttct gagcaacgga ataccagcct gcctcagaac ctcttccaga agaatatccc
     2041 ggcgtctgcg ttccggtcgt aaatggctgg catcatccag ctctactgct gcaacaatac
     2101 tgaacgaacg ccgctcaacg ataaccacat caacatgcca ctgagacacc atcctgaata
     2161 actgccacca ctggcgtgat cgtggccgga tattcccgtt cagctggacg atatccgcga
     2221 cccgtacctg cggacacaga taccaccgct tcatatccac aattctgaac agtcctttca
     2281 taaaactgac ttccctttct gtcagcagcg tcttctgacg ttgccagtat tcaccgccgg
     2341 acagtattcg ctctgcatca ccggtccgta tacctgccgc atgcaattgc atcagcaaag
     2401 gagaatgctg atttacactt ctgaggataa tccggataag taacgctgca ataatcagaa
     2461 caataagaat aaaaataatc agcttcattg tttatctgct cctggtaatt aattatgctg
     2521 aattattacc ttacatattt ccatatctct tttggtatcc tgtcatataa ctttccggtg
     2581 attaattccg ctaaccggtg gtctgctgct gaattaaatg attcacgttc actgtttaat
     2641 aaactgtctc tgtttttatg aataattttt tccagcgtat tgactgatga acatcgccgt
     2701 aactgataca gccattcctg ttttgttttc gccattttta ttcccgctga gaacagatga
     2761 atgataagat tgccatcgct ttatttacgg tgtctccata tccagggggg aaccggatca
     2821 gcatctgacc agagcccacg tttttgttgt ctggcttcgt tctgaaggac aggcagcacg
     2881 ggatctgtgt tgtactgctc atatacccag gcagccccgg cccggaccat aaactgatta
     2941 acattcattc cgtctggtgc ataaacctgc ccgagaatac gaccataacg atctcgctga
     3001 aaatatgtga cggtaaccgt ttttcctgca accagtgatt tcatcatgtc cgttgaccac
     3061 cggccataat cctgtttctt ttccggtgca tcaatattta tcagcctgat ccgcactgcc
     3121 ttccgtgagt ccatgacctc gatggtatca ccgtccagta cacgaacaac ccgtccatga
     3181 atatctgcac acaataccgg ccatgaaaag ataaataata ccagtggaat atatttcctc
     3241 atgttattct ccatatcaga taaatggcac ctgtatttca ggtaatcctg aatatcgcag
     3301 cacacactga ataacacctt attttgtgaa attaatcaca aaatataaaa tcacgactta
     3361 atacggaaaa aactctgtgc tactcagaac tgtccggtca tacttcccga ccggatatta
     3421 aaaaaagcaa atctcatgca ttattcagcc ttctgaatcc ctggagtaat gaaggctgct
     3481 ttttcgttac acccttcccc ggcagcgccg gtggcagtgt tcagcccttt ttcgggcaaa
     3541 ctgctgccag tctgtccggg gagcagactg cgcagcccgt agccatgcct cagcggctcc
     3601 cggccagtcc cccctgactt ccagccggac agcccggcgt ccgacctgcc ggtagcgcca
     3661 taccccggag ttttgcgaat cacgccctgt tccgttcatt ttccttcccc ctttaatcca
     3721 ggccggtgaa tgtgttataa atttttataa ccttcttctg ccgggtatgg aagaaggttt
     3781 cagagaagcc ttatttttcc gcctccttta gtgtgaagga ggctttttta ttgttcatca
     3841 agcacggcct gaagttctgc ctttatccgg ttctggcggc ggattttatc cagacgctct
     3901 gccgcataca cttcttcctc ctgagaaata tgctccgtca catacccttc cgtgtcatac
     3961 cggcaggcac cggctttcat ggcacacaga tagctttctg aacgggtgat ggccttcagc
     4021 gccctgcgca gttttttatg cgagagcggg atattccgct gcgccacgtc ttccagtaac
     4081 acgtcccgga taccgcaggc cagaagccgg ggtgtgtcac cgtcaaataa tcccggccac
     4141 cagggtttca gggtgttcac ggcttcatcc agtgtgggca ggttcagata aatggacagc
     4201 gcctgtctgg cctgcgcttt ttttgctgtc agctctgctt cccgggcagc cttctccgcc
     4261 agtttctgct ttttcacctt ccattttggt ggcgtggtga cattgatgat ggttttccgg
     4321 ctccgggtcg gtgtttcccc ttccgttttc cgtttcagtg tcagtaccgg tcgtttctgc
     4381 tctgtcatga ttgccctgac ctttgtgaaa atatgtcctc caggtcgttg aaactactca
     4441 ctatgatatt aagctgacct caacgacctc tgacatatta ataccgacaa ttaaagatgt
     4501 tttttaaacc attgcgtctg tactgccgcc acacgttcaa aaaacgcgcc ttcataaata
     4561 tcataatggc atgcgtcagc ttcctcgtat aattccttag taccagaagc aacagcatca
     4621 tataaggctt ttccctgttc tggtggatta acactatcct ggccggcaat aacaatcaaa
     4681 actgggcact gtactttggc tgcgctctct gccggtttat attgcaacgt ctccataacc
     4741 gtaaggaaag gtatttttat atccatttca ggatactgac cttttacctt ctcgaagaat
     4801 acctttgatt cattatcact cagtacccgg gtaaccccca caaacatctc tttcccggtg
     4861 tttttcttct tctctgccat tttattcagc gtggacagaa aagacgctct ctccgattca
     4921 ttcatctctc cggtaaccag aacatcaccg tcagcaaaag ccagctggct gacaatacat
     4981 tttacgcgtt ggtcctgcgc agctgcactg aagacatgcc cccctcccag cgatgttccc
     5041 cataacccaa tacgctgatt atcaatacat tcctgctttt ctgcccaatt gataactgaa
     5101 ataatatctt cggtctgcat tgcag
//
LOCUS       DAPGWB010000237         5047 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.239, whole genome shotgun sequence.
ACCESSION   DAPGWB010000237 DAPGWB010000000
VERSION     DAPGWB010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5047
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.239"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            824..979
                     /gene="hokD"
                     /locus_tag="RHX79_004425"
     CDS             824..979
                     /gene="hokD"
                     /locus_tag="RHX79_004425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokD"
                     /protein_id="HDV2199514.1"
                     /translation="MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF
                     TAYEPEE"
     gene            1196..1447
                     /locus_tag="RHX79_004426"
     CDS             1196..1447
                     /locus_tag="RHX79_004426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199515.1"
                     /translation="MMNIEELRKIFCEDGLYAVCVENGNLVSHYRIMCLRKNGAALIN
                     FVDGRVTDGFILREGEFVTSLQALKEIGIKAGFSAFAEE"
     gene            1514..1792
                     /locus_tag="RHX79_004427"
     CDS             1514..1792
                     /locus_tag="RHX79_004427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199516.1"
                     /translation="MARNVKYYNSDNSPVLACTHGRYSHAFKSEWFQHPPCTAEQAEW
                     LIHSYRRRGFEVKKALSLDYRHWIISVRLPYSERPPRASRTFQQRIWR"
     gene            1794..2843
                     /locus_tag="RHX79_004428"
     CDS             1794..2843
                     /locus_tag="RHX79_004428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HDV2199517.1"
                     /translation="MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRN
                     LPSGVVPAVRQPLAEDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHH
                     TETVIHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERE
                     LSLAELSWWAVCNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGEQTATSILKQR
                     TKNLAPLPYAHQQQNPSQEKTVVSINVDPESPESFMKLPKRRRWVKEKYTRWVKTQPC
                     ACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEEKYGSQLEL
                     IFRFIDRALAIGVLA"
     gene            2857..3609
                     /locus_tag="RHX79_004429"
     CDS             2857..3609
                     /locus_tag="RHX79_004429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitermination protein"
                     /protein_id="HDV2199518.1"
                     /translation="MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSK
                     APLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFAD
                     YSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEVSTA
                     CRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQ
                     WYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR"
     gene            complement(3887..3976)
                     /locus_tag="RHX79_004430"
     CDS             complement(3887..3976)
                     /locus_tag="RHX79_004430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199519.1"
                     /translation="MNNPVCLDDWMIGFKSLCCTLAVIALLII"
     gene            complement(4031..4243)
                     /gene="cspF"
                     /locus_tag="RHX79_004431"
     CDS             complement(4031..4243)
                     /gene="cspF"
                     /locus_tag="RHX79_004431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspF"
                     /protein_id="HDV2199520.1"
                     /translation="MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEE
                     ITTGLRVEFCRINGLRGPSAANVYLS"
     gene            4544..4759
                     /gene="cspB"
                     /locus_tag="RHX79_004432"
     CDS             4544..4759
                     /gene="cspB"
                     /locus_tag="RHX79_004432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspB"
                     /protein_id="HDV2199521.1"
                     /translation="MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRT
                     LFEGQKVTFSIESGAKGPAAANVIITD"
BASE COUNT         1399 a         1046 c         1251 g         1351 t
ORIGIN      
        1 cggccatgat taagctaaac atcgcaatct cctaaattta cttactaaag tcagtgtatt
       61 tttatcatgt tgcttcattg tgtatgaaag taacattggt tgtccatgct cgtatgcctc
      121 tcataattca caaatttgcg aatatttttt ataaaaattc aaaactgata gggtgacaca
      181 atcaaaattc acaaagtgaa cctgcttcta atgtggttac ggtacgatca tgtgggcaat
      241 ttccattgct gaaaactccg ggatcaacca tgatgtatga gctgtagtat gaagtctctt
      301 gctatccggt taagtaaatg tctgcttctc actcaaagcg gactagaagg ttagcttgcg
      361 tcggacttgg cgtatttaaa gaagtgctgg tggtaactgg ttgttgtgtt ccatttctac
      421 aaaacaaaat cacagaaact atacccaata gttatattga atcaatgatg agacagcctc
      481 atatttatca gaactggtgt acgtccaata caggaggttg tcgtgctggt tctcaaatgt
      541 gcgctagcta ttgcggctgt aatggcaatt tattgtcttg ctgttgttct tacggatcgc
      601 ctttctgatt gattttatat tggcgaggtg acgggagtta agtagaattg ctgcgggtgc
      661 ttgaggctat ctgcctcagg catgaacacc aacggcagat agagaaaagc cccagttaac
      721 attacgcgtc ctgcaagacg cttaacatta atctgaggcc aatttcatgc tagacatatg
      781 taggttagcc tcttacgtgc cgaaaggcaa ggagaagcag gctatgaagc agcaaaaggc
      841 gatgttaatc gccctgatcg tcatctgttt aaccgtcata gtgacggcac tggtaacgag
      901 gaaagacctc tgcgaggtac gaatccgaac cggccagacg gaggtcgctg tcttcacagc
      961 ttacgaacct gaggagtaag agacccggcg agggagaaat ccctcgccac ctctgatgtg
     1021 gcaggcatcc tcaacgcacc cgcacttaac ccgcttcggc gggtttttgt ttttattttc
     1081 aacgcgtttg aagttctgga cggtgccgga atagaatcaa aaatacttaa gtagcgcgca
     1141 gggataagag ggatggtccc ttaaagggga gagctaatta tccggaagga ttctgatgat
     1201 gaacatcgaa gaactgcgta aaattttttg tgaagatggc ctctatgctg tgtgcgttga
     1261 aaatggaaat cttgttagtc attaccgcat tatgtgtttg cgaaagaatg gggctgcgtt
     1321 aattaatttt gtggatggtc gagtgacaga cggatttatc ttgcgcgaag gtgagtttgt
     1381 cacttcatta caggcactga aagagatcgg aataaaagca ggcttttcag cttttgcaga
     1441 agaataaact catctacaat cttgcgcggg gctgaactcc cgctgagtaa caccgtgcca
     1501 ccggagaaaa ccgatggcac gcaacgtaaa atattacaat tctgataatt cgcccgttct
     1561 tgcctgcacg cacgggcggt attctcacgc attcaagtct gaatggttcc agcaccctcc
     1621 atgcactgca gaacaggccg aatggctgat tcattcttac cgcaggcgcg ggttcgaggt
     1681 taagaaagct ctcagtctcg actatcggca ctggataatc tctgtcaggc tgccttattc
     1741 cgaacgccca ccacgtgcgt cccgcacttt ccagcaacgg atctggaggt aacgtgcggg
     1801 tattacttag acctgttctg gtgcctgagc ttgggctggt ggtccttaag ccgggccgtg
     1861 aatccataca gatatttcat aatcctcgag tgctggtgga accggaacca aaaagcatgc
     1921 gtaatctgcc atccggagtc gttcctgccg ttcgccagcc gctggcggaa gacaaaacat
     1981 tgctaccgtt ttttagtaac gaacgggtga ttcgtgctgc tggcggcgtt ggcgcattgt
     2041 ctgactggct attacgtcat gttacatcct gccagtggcc taatggcgat taccatcaca
     2101 ctgaaacagt cattcaccgt tatggtaccg gcgcaatggt gttgtgctgg cactgcgaca
     2161 accaactgcg tgaccagaca tcggaatcac tggagctgct tgctcaacaa aatctgacag
     2221 catgggtgat tgacgtcatc cgtcacgcaa taagcggtac gcaggagcgg gaattatctt
     2281 tggctgaatt atcctggtgg gcggtctgca atcaggtggt ggatgcacta cctgaggctg
     2341 tatcgcgtcg ttcgctggga ttaccagcgg aaaaaatctg ctcggtgtac cgcgaaagcg
     2401 acatcgtacc gggagagcag accgccacca gcatattgaa acaacgcaca aaaaatcttg
     2461 caccgttgcc ttacgcccac cagcaacaaa acccatcaca ggaaaagacg gtggtaagca
     2521 tcaacgttga tccagagtct ccggaatctt tcatgaagct gcctaaacgt cgccgctggg
     2581 ttaaggagaa atacactcgt tgggttaaga cacagccgtg tgcttgctgc ggtatgccag
     2641 ccgacgatcc gcatcatctg attggtcacg ggcagggcgg aatgggaaca aaagcacatg
     2701 atctctttgt gttgcctttg tgcagaaagc atcacaacga gctgcatacg gatacagtgg
     2761 catttgaaga gaagtatggc tcccaactgg agctgatatt tcgttttatc gatcgcgcgc
     2821 tggcaattgg cgtactggcg taagtggaga acgagcatga accttgaagc cttaccaaaa
     2881 tattactccc caaaatctcc aaaattgagc gatgacgctc cagcgacagg caccggttgt
     2941 ttaacaatta cggatgtaat ggcagcgcag gggatggtgc agtcgaaagc accacttggg
     3001 ttggccttat ttctggcaaa agttggtgtt caggaccctc agtttgcgat tgaaggcctg
     3061 ctaaattacg cgatggcact ggataacccg acattgaaca aattgagtga agaaatccgg
     3121 ttacagatta ttccttacct cgtgagtttt gcctttgctg attactccag gtctgcggca
     3181 agtaaggctc gctgtgagca ttgttcaggt acgggatttt ataatgtatt gcgcgaagtg
     3241 gtgaaacact acagacgcgg ggaatctgta atcaaggaag aatgggtgaa ggaactatgt
     3301 cagcattgcc atggtaaggg cgaagtcagc acagcgtgca gagggtgtaa gggtaaaggg
     3361 attgttctgg atgaaaaaag aacccggttt catggcgtac cggtatataa gatttgtggg
     3421 cgttgtaatg gaaaccggtt tagtcgttta ccgaccacgc tggcacgacg tcatgtccag
     3481 aagctggtac cagacctgac cgattatcag tggtataagg ggtatgcgga cgtcattggt
     3541 aaactggtaa caaagtgctg gcaggaagaa gcatacgcgg aagcgcaatt gaggaaggtg
     3601 acgagataaa tgatttttgc tgaagatggc gacatgatgt ttgcattttt caaaaaatat
     3661 ggataaaatt ttttcaacga tgggctttgt ataaccgacg ttaagaaaaa gtagaaaacc
     3721 cgctgatgag cgggttttgt gctttaaatg gggcaatggt aatgttgaat ctcatcccgg
     3781 gactcatgtc tgttaactta ttatttagct ggtgacttgg ttatttgcct gatgtttaaa
     3841 atgttttctt ccagtacaat gtccctaaac acaatgagtc tgcttattat attattagca
     3901 gagctattac ggccaaagta cagcataagc ttttaaagcc aatcatccag tcatcaagac
     3961 agacggggtt attcataaaa actctccatg tgtgatccga tggggcctga aattaaagct
     4021 ttaatatagc tcatgaaagg taaacattgg cagctgaagg gccacgcaga ccatttatcc
     4081 ggcaaaattc cacgcgtaat ccggtggtaa tttcttctgc atcgcggaga ttgagcgctg
     4141 aaacatgaag ctggacatcg atacgaccat cggatggggt gataagaccc ttgccgcttt
     4201 tgccgtcaaa ggttttgaca attcctgtca ttttacggga caaaaaaatt ccttaatact
     4261 gataacttgg cgcactatac acacgttcct gaagaaagct atagtttttt gatggggttg
     4321 aagatggctg gatgtctaaa ataaacattg cttcatatgt tcaactatgc gttaatgatt
     4381 gcgtcggttt gaagaacaga cgatatacga agtagtttac taaagcagtt ctcatttcag
     4441 gtgttattca cttattcctt ctttgagtct ctccaattaa gtacgaagtc gtttctgtta
     4501 tgcaaaccat ttatgccgaa aggctcaagt taaggaatgt agaatgtcaa ataaaatgac
     4561 tggtttagta aaatggttta acgctgataa aggtttcggc tttatttctc ctgttgatgg
     4621 tagtaaagat gtgtttgtgc atttttctgc gattcagaat gataattatc gaaccttatt
     4681 tgaaggtcaa aaggttacct tctctataga gagtggtgct aaaggtcctg cagcagcaaa
     4741 tgtcatcatt actgattaaa attcatcgct cgtctgtata cgataacgaa gaaggctgat
     4801 gcctgagtag agatacggac agagtagtga atattggatc tctttaataa aaataaggag
     4861 gtccaataca tgaaacaatg gccagcatat ttggcaaaac cttaatcagg aaaagtatgc
     4921 taaccattgt ggtgaagtgc aggtttgctg catgaatagt tttacagcag aagctaactg
     4981 ctggcatggc aaaacaaagt gcgtaagtgg atgactccca caaaaagcac cacaatctca
     5041 aacccgc
//
LOCUS       DAPGWB010000238         4946 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.240, whole genome shotgun sequence.
ACCESSION   DAPGWB010000238 DAPGWB010000000
VERSION     DAPGWB010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4946
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.240"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(340..716)
                     /gene="rnpB"
                     /locus_tag="RHX79_004433"
     ncRNA           complement(340..716)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="RHX79_004433"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(749..1894)
                     /gene="garK"
                     /locus_tag="RHX79_004434"
     CDS             complement(749..1894)
                     /gene="garK"
                     /locus_tag="RHX79_004434"
                     /EC_number="2.7.1.165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312029.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate 2-kinase"
                     /protein_id="HDV2199522.1"
                     /translation="MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSIPVADG
                     GEGTVEAMIAATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAE
                     KRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNE
                     IGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAM
                     IVELDNNLSHYADVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTAL
                     NLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVH
                     QHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG"
     gene            complement(1991..2881)
                     /gene="garR"
                     /locus_tag="RHX79_004435"
     CDS             complement(1991..2881)
                     /gene="garR"
                     /locus_tag="RHX79_004435"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HDV2199523.1"
                     /translation="MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAA
                     GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLA
                     SREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVV
                     HTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLD
                     AKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGT
                     ADHSALACYYEKLAKVEVTR"
     gene            complement(2911..3681)
                     /gene="garL"
                     /locus_tag="RHX79_004436"
     CDS             complement(2911..3681)
                     /gene="garL"
                     /locus_tag="RHX79_004436"
                     /EC_number="4.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxyglucarate aldolase"
                     /protein_id="HDV2199524.1"
                     /translation="MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWL
                     VLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVET
                     KEEAEQAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN
                     VDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP
                     VEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFKK"
     gene            complement(3697..>4946)
                     /gene="garP"
                     /locus_tag="RHX79_004437"
     CDS             complement(3697..>4946)
                     /gene="garP"
                     /locus_tag="RHX79_004437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="galactarate/glucarate/glycerate transporter
                     GarP"
                     /protein_id="HDV2199525.1"
                     /translation="NYADRATLSIAGTEVAKELQLSAVSMGYIFSAFGWAYLLMQIPG
                     GWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISMFFMRFMLGFSEAPSFP
                     ANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAWGWEHVFTVMGVIGF
                     VLTALWIKLIHNPTDHPRMSAEELKFISENGAVVDMDHKKPGSAAASGPKLHYIKQLL
                     SNRMMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPALCGFAGGVL
                     GGVFSDYLIKRGLSLTLARKLPIVLGMLLASTIILCNYTNNTTLVVMLMALAFFGKGF
                     GALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNAALVFVGC
                     SALMAMVCYLFVVGDIKRMELQK"
BASE COUNT         1177 a         1438 c         1197 g         1134 t
ORIGIN      
        1 accctgtgca ccaaaagcaa aaactcactg acgcgggttt gaaactgatg gcaaccgcaa
       61 aaatgcctga tgcgctacgc ttatcaggcc tacgccatct ctgcaatata ttgaatttgc
      121 gtgcttttgt aggcaggata aggcgttcac gccgcatccg gcatgaataa agcgcactca
      181 acaatctgaa acccgccgga acggtttatt acgtacatca ggtgaaactg accgataagc
      241 cgctttcttt tgggtatagc gtcgtggaca gtcattcatc tttctgcccc tccaaaagca
      301 aaaacccgcc ggtttacgct ggcgggtttt cgttaaatca ggtgaaactg accgataagc
      361 cgggttctgt cgtggacagt cattcatcta ggccagcaat cgctcactgg ctcaagcagc
      421 ctacccgggt tcagtacggg ccgtacctta tgaaccccta tttggccttg ctccgggtgg
      481 agtttaccgt gccacggact gttaccagcc gcgcggtgcg ctcttaccgc accctttcac
      541 ccttacctga tcccgcttgc gcgggccatc ggcggtttgc tctctgttgc actggtcgtg
      601 ggtttccccc ccaggcgtta cctggcaccc tgccctatgg agcccggact ttcctcccct
      661 ccgcccgtct cccccgaaga ggacgacgac gaagcggcga ctgtctggtc agcttcggcg
      721 cgcagtatag agggtttgcg cgcccttgtc accccgcgtt gcgcattcca atcgccagtg
      781 tcgcggcgat attacgtgaa gcacggcaga tattgtcata agccccgcgg aatgcttcgt
      841 ccaacgtacc tatgctggtc aatacgctga agaccgcatc gatgccatgc tgatgtacaa
      901 cgccaacatc atcggtcagg ctacccgcaa tgccaatcac cggtttatgg tacttcttcg
      961 ccacgtttgc aacgccaatc ggtaccttgc cgtgaatact ctggctgtca atacgccctt
     1021 caccggtgat caccagcgta caatcgtgaa tatgttcctc cagattcagc gccgtagtga
     1081 cgatttcaat accacttttc agttccgcac caagaaacgc catcagcgcc gcacccatac
     1141 cgcccgcagc tcctgcgccg gggacatctt tcacatcaac atgcagcgct tttttaatga
     1201 catcggcata gtgagagagg ttattgtcca gctcaacaat catcgcttca ctggctccct
     1261 tttgtgggcc aaagatgcgc gatgcgccgt tatcgcccac cagcggattg gtgacatcac
     1321 aagcgacgcg aatgacgcaa tcttttaagc gcggatcgag gccggaaata tcaatatcat
     1381 tcagagtatt aagactaccg ccgccaaaac caatttcatt gccgttggcg tcgcataatt
     1441 tcgcccccag cgcctgtacc atgcctgcgc cgccatcatt tgtagcgcta ccgccaatgc
     1501 cgataataat gtttgtcgcg ccgctctcca gcgcctgcag gattaactcg cctgtaccgc
     1561 gtgaagtggt cacgagtgga tcgcgttttt ccgcaggtac cagctccagc ccactggccg
     1621 ccgccatttc aataaacgcg gttttgccat cgccggagat cccccaactg gcattcactt
     1681 tctcgcccag cggccctgta acccaggcgt gacgttcaga accctgggtg gctgcaatca
     1741 tcgcttccac cgttccttcg ccaccgtcgg caaccggaat agaaacgtac tgtgcatcag
     1801 gaaaaatttc ccgaaatcct ttttctatcg cctgcgcaac ctcgctggca gataaacttt
     1861 ctttataaga gtctggggcg attacgattt tcatacctat gcctgttacc acatgacgcc
     1921 ggagggcgtt tctcttattc ggcctggatt ccaggcccgg attgcaatac gccatccggg
     1981 cacgacgtca ttaacgagta acttcgactt tcgccagttt ttcgtagtag cacgccaggg
     2041 cgctatgatc cgccgttcct aaaccatctg ctcgcagtgc ctgcatcatc tccataaccg
     2101 cagctgtgag cggcagttgc gcgccgacgc cgtgggaagt atccagcgca tttgccagat
     2161 ccttaatatg cagatcaata cggaagcccg gcttgaagtt gcggtccatc accatcggcg
     2221 ctttggcatc cagcacggta ctgcccgcca gtccaccgcg aattgcctga tacaccaggt
     2281 ccgggttaac gcccgctttg gttgccagcg ttagcgcttc tgacatcgcg gcaatattca
     2341 gcgccacaat gacctgattt gccagtttgg tgacgttacc tgcaccgatt tccccggtat
     2401 gcaccacgga acccgccatc gctttcatca aatcatagta tttgtcgaaa atagccttgt
     2461 cgccgcccac catcactgac agcgtaccgt cgatggcttt cggttcaccg ccgctcaccg
     2521 gagcatccag catatcaatg cctttcgctt tcagcgcttc gctgatttca cggcttgcca
     2581 gcggtgcgat agaactcata tcgatcaata ccgtacctgg cttcgcgcct tcaatgatgc
     2641 cattctcacc cagcgccacc tctttcacat gaggggagtt tggcagcatg gttatgatga
     2701 cgtcgcactg ttcagcgatc gctttagccg tagacgctgt ttctgcacct gcagcaatca
     2761 cgtcagcaat agcttctggg ttacggtcag caaccaccag cgagtaacct gctttcagaa
     2821 ggtttttact cattggttta cccataatcc ccaggccaat aaaaccaact ttcatagtca
     2881 tatcaatcat ctctcttgtt gcggtggtgg ttatttttta aaggtatcag ccagtttctg
     2941 agtggcagag cggaagacgc caagatcgct gccgacagcc acaaacgtcg cgccccattc
     3001 cagataacga cgcgcatcgg cttcgaccgg cgcgagaata ccgctgggtt tgccgtgcgc
     3061 actggcacgg ttaaaaatgt gctgaattgc tttttgtaca tccgggtgcg aggcattgcc
     3121 gagatggcct aatgccgcag ccagatcgct ggggccgacg aagataccgt ctacaccttc
     3181 ggtagcggca atggcatcga cgttatctac gccctgctga ctttctatct ggaccagaat
     3241 ggtgatgttc ttgttcgact gagcgaaata atccgccacg gtgccaaaca tattggcgcg
     3301 gtgagaaacg gagacgccgc gaatgccttc cggtgggtaa cgggttgatg ccaccgcctg
     3361 ctctgcttcc tcttttgttt ctacaaaagg aatcaggaag ttatagaaac cgatatccag
     3421 aagacgctta ataattaccg gctcgttggt cggcactcgc actactggcg cgctggcgct
     3481 gcctttcagg gccattaact gcggaataaa cgtggagata tcgtttggcg catgttcgcc
     3541 atccagcacc agccagtcaa acccagccaa accaagaact tcagtgctaa tcgggttaga
     3601 gagtgctgac cagcaaccaa tttgtacctg tttcgcagcc agtgcggctt tgaatttatt
     3661 cgggaaaaca tcgttattca tcgcttatac ctttgcttat ttctgcaatt ccatacgttt
     3721 aatgtcgcca actacgaaga ggtagcagac catcgccatc agcgctgaac atcccacgaa
     3781 aaccagtgct gcattgaagg agtgcagttc acttaccagg tagccaatca ccagtggagt
     3841 gacaatggag gcaacattgc caaagacgtt aaagacgccg ccacagaggc caacaatctc
     3901 tttcggcgcg gtgtcagaaa tcaccggcca gcccagagca ccaaatcctt tgccaaaaaa
     3961 agccagcgcc attagcatga ccaccagcgt ggtgttgttg gtgtagttac ataagatgat
     4021 ggtggaagcc agcaacattc ccagcacaat cggtagctta cgtgccaggg tcagggataa
     4081 accgcgtttg atcagataat ccgagaagac acctcccagc acgccgcccg caaaaccaca
     4141 cagtgccgga atcgaggcga ccagacccac tttcagaatc gacatgcctt tttcctgcac
     4201 cagataaatt gggaaccagg tgaggaagaa ccaggtgatg gtgttgataa aatattgtcc
     4261 gaaaaatacg cccaacatca tgcggttaga gagcaattgc ttgatgtaat gcagtttggg
     4321 accgcttgct gccgcgctgc ccggcttttt gtggtccata tcgaccaccg cgccattttc
     4381 agagataaac ttcagctctt ccgcagacat acgtgggtga tctgtcgggt tatgaatcaa
     4441 tttgatccac agcgccgtca gcacaaaacc aatcaccccc ataacggtaa agacgtgctc
     4501 ccagccccag gcgaaagtca gccagccaag cagaggcgaa aagagcgcca gcgagaaata
     4561 ttgcgccgag ttaaagatgg cggaggcagt accacgttct ttcgtcggga accaggcggc
     4621 gacaatacgg gcgttcgccg ggaatgatgg cgcttccgag aagccgagca taaagcgcat
     4681 aaagaacatg gagatccctg cccaggccag cgggaacata tcaacaaagc cttgcaggaa
     4741 agtgaatagc gaccagaaaa agaggctata ggtataaact tttttcgagc caaacttatc
     4801 aagcagccag ccgccgggga tttgcatcag caagtaggcc cagccaaaag cagaaaagat
     4861 gtaacccatc gaaaccgcac ttaactgcaa ctcttttgcc acttcggtac cagcaataga
     4921 cagcgttgca cgatcggcgt agttaa
//
LOCUS       DAPGWB010000239         4920 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.241, whole genome shotgun sequence.
ACCESSION   DAPGWB010000239 DAPGWB010000000
VERSION     DAPGWB010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4920
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.241"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(20..478)
                     /locus_tag="RHX79_004438"
     CDS             complement(20..478)
                     /locus_tag="RHX79_004438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414921.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HDV2199526.1"
                     /translation="MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRF
                     IRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATI
                     RERLTMRDFMDTLRASGIQTGGPDSLSQRDRQVFAAELEKWWLEVQRSRG"
     gene            598..1407
                     /gene="proC"
                     /locus_tag="RHX79_004439"
     CDS             598..1407
                     /gene="proC"
                     /locus_tag="RHX79_004439"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDV2199527.1"
                     /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAA
                     LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTL
                     DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI
                     AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET
                     GEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS"
     gene            complement(1424..2539)
                     /gene="adrA"
                     /locus_tag="RHX79_004440"
                     /gene_synonym="dgcC"
     CDS             complement(1424..2539)
                     /gene="adrA"
                     /locus_tag="RHX79_004440"
                     /gene_synonym="dgcC"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase AdrA"
                     /protein_id="HDV2199528.1"
                     /translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP
                     RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL
                     KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL
                     TGITVSFNSAPLEWWLSLPIIVVYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV
                     YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ
                     ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVREGLNTLRLPNTPQVTLRISVG
                     VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA"
     gene            complement(2641..2961)
                     /gene="psiF"
                     /locus_tag="RHX79_004441"
     CDS             complement(2641..2961)
                     /gene="psiF"
                     /locus_tag="RHX79_004441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PsiF"
                     /protein_id="HDV2199529.1"
                     /translation="MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQA
                     LKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACL
                     KKAA"
     gene            complement(3080..4495)
                     /gene="phoA"
                     /locus_tag="RHX79_004442"
     CDS             complement(3080..4495)
                     /gene="phoA"
                     /locus_tag="RHX79_004442"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414917.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HDV2199530.1"
                     /translation="MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGA
                     RRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPL
                     TGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKA
                     AGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLL
                     NARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKP
                     LLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSK
                     NEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKDGNTLVIVTADH
                     AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN
                     VVGLTDQTDLFYTMKAALGLK"
     gene            complement(4596..4856)
                     /gene="iraP"
                     /locus_tag="RHX79_004443"
     CDS             complement(4596..4856)
                     /gene="iraP"
                     /locus_tag="RHX79_004443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraP"
                     /protein_id="HDV2199531.1"
                     /translation="MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND
                     QQRLIDQVEGALYEVKPDASIPDDDTELLRDYVKKLLKHPRQ"
BASE COUNT         1143 a         1340 c         1217 g         1220 t
ORIGIN      
        1 tgtaaataat aaattacatt tagccacgac tacgttgcac ttccagccac cacttctcca
       61 gctccgcggc aaagacctgg cggtcacgtt gtgaaaggct atctggtccg ccggtctgga
      121 tcccactggc acgtaaggta tccataaaat cgcgcatcgt caggcgctca cgaatggtcg
      181 ctggcgtgta acgttcgccg cgcggattaa gcgccgctgc gcctttctcg atggcttcag
      241 cagccaaagg tatatctgcg gtgatcacca aatcgcccgc ttcacactgc cggacaattt
      301 cgttatcggc aacgtcgaaa cctgccgcga cgcgcagcgt acgaataaat cgcgatggcg
      361 gcacgcgtaa actctggttt gctaccagta ccagcggcat ctgcatacgt tccgccgcgc
      421 gatacaaaat ctctttaatt acattgggac acgcgtcggc atccacccaa attgtcataa
      481 agtcatcctt tgttgggtaa tcctctattg tgtcgcgctt ttgccttccg gcatagttct
      541 gtttatgctt ctgccagcga ttatcaaaac aatgaatttc acggcaggag tgaggcaatg
      601 gaaaagaaaa tcggttttat tggctgcggc aatatgggaa aagccattct cggcggtctg
      661 attgccagcg gtcaggtgct tccagggcaa atctgggtat acaccccctc cccggataaa
      721 gtcgccgccc tgcatgacca gttcggcatc aacgccgcag aatcggcgca agaagtggcg
      781 caaatcgccg acatcatttt tgctgccgtt aaacctggca tcatgattaa agtgcttagc
      841 gaaatcacct ccagcctgaa taaagactct ctggtcgttt ctattgctgc aggtgtcacg
      901 ctcgaccagc ttgcccgcgc gctgggccat gaccggaaaa ttatccgcgc catgccgaac
      961 actcccgcgc tggttaatgc cgggatgacc tccgtaacgc caaacgcgct ggtaacccca
     1021 gaagataccg ctgatgtgct gaatattttc cgctgctttg gcgaagcgga agtaattgct
     1081 gagccgatga tccacccggt ggtcggtgtg agcggttctt cgccagccta cgtatttatg
     1141 tttatcgaag cgatggccga cgccgccgtg ctgggcggga tgccacgcgc ccaggcgtat
     1201 aaatttgccg ctcaggcggt aatgggttcc gcaaaaatgg tgctggaaac gggagaacat
     1261 ccgggggcac tgaaagatat ggtctgctca ccgggaggca ccaccattga agcggtacgc
     1321 gtactggaag agaaaggctt ccgtgccgca gtgatcgaag cgatgacgaa gtgtatggaa
     1381 aaatcagaaa aactcagcaa atcctgatga ctttcgccgg acgtcaggcc gccacttcgg
     1441 tgcggttacg tccggctttc tttgctttgt aaagcgccaa atctgccgat ttcaaccact
     1501 cacgatagtg actcatttgt gggttcagcg gcgcaacccc cacactaatc cgtaaagtta
     1561 cctgtggcgt attcggcaag cgtaacgtgt ttagcccttc acgcacccgt aacatggcgg
     1621 taatggcgct ctcagctggc gtaccggaca tgattactgc aaactcatcg ccgccaaacc
     1681 gaccaatcac atcgctaccg cgcagggtaa tttgtaactg tcgggtaagc gccacaatcg
     1741 cttcatcgcc cacatcatga ccccaggtat cgttgatgct cttgaaatgg tcgatatcga
     1801 taatcagtaa cgttgcatcg cgattatgcc gccgacagtt atcaaattca ttgcgtaaca
     1861 tagtttccca atgacgtcgg ttatacacgc ccgtcatgcc gtcgcgggta ctcatgacct
     1921 gcaacctgcg tttatgttcc gccagtttgg ttgccgtctg gtagctgacc cagccaaaca
     1981 gcagaggata aacgacaata atgggaaggg agagccacca ttccagcggc gcactattga
     2041 acgacacggt aatgcccgta agctcgaggg tgacaaggca ggaaaccacc atcaacacca
     2101 gacccgcgac aaacagacgg gggccgcctg cccccatcaa attcagacac ataatcatca
     2161 acatagcggt ggaaggcagc acgtttacgc ccattacgcc tacccacatt cccgctaata
     2221 ctgcatcggt ttttaagttg taaatttccc ggctaagcgg atcgacggcc ctgctcgcta
     2281 tctgccaggc taaatgcggc cagacgaacg cccagccgac caacaccagc caccaccagc
     2341 ccggcggcgg gtgcgaaacc agcgttgaag caatcggtaa gaacatgcca gccaggccaa
     2401 ccgcacgggg tagtctgacg cgacgggcga agcgcagccc ggaccgctga tgttcgtttt
     2461 gaggagttaa aggaggttcc tccccatgcg ccgccgcttt tttgaaaaag ttttcatcat
     2521 tcattatttt tgggaacatt cagaaacaat tttcccaaat tatagagacg gggctaaagg
     2581 cagaagtatg aaatttcggg tgagccactt tcgtagctca cccgttagca ctatcaggta
     2641 tcaggcggct ttcttgaggc aggcactcat aaacttatta cgatcatcac ctttcagaga
     2701 ttgttgcgtt gcttgattat tacattcgcg catcttttgc tgctgtggcg tcaaactttt
     2761 ttcaccaggc gcagacttgc tgttcttcag gcaatcactc atgtaggtct tacgagcatc
     2821 ccctttcaac gcctgcgccg tcgcctgctg attacaggag gtcatacgct gttgttgtgg
     2881 ggttaaggtt ctctcggcag cgccgacggt ggttaaaaaa accagaccaa aaagcaaggt
     2941 aaccagtaat gttattttca tagcaccatc cctcttcatg ttttaaccat gagcgtttgc
     3001 gcccgtgatc tgccattaag tctggttgct aacagcaaaa aaaccacccg gcagcgaaaa
     3061 ttcactgccg ggcgcggttt tatttcagcc ccagagcggc tttcatggtg tagaagagat
     3121 cggtctggtc ggtcagtcca acaacattgg cggcatgcgg gccatacgcc gcaatacgca
     3181 actgactgcc ggtatgttct tgtgaatcct cttcggagtt cccgtagctc atcaccatca
     3241 ctgcgccatc tttggtattt agcgcctggg tgaggcccgg agctttggta tccggcgcga
     3301 caatctggct ggcgtgggcg tgatcagcgg tgactatgac cagcgtgttg ccatcctttt
     3361 tagcgaattc cagcgcccgt tgtacggctt catcgagatc gaccgtctcg ccaatttgcc
     3421 cacaaggatt cgcagcgtga tcctgtttat cgattgacgc accttcaact tgcaggaaaa
     3481 atcctttctc atttttactc aacaattcaa tggctttgtc ggtcatctgc gccagggttg
     3541 gtacactgtc attacgttgc ggattaggcg tacaggtgac tgcgggctta tcgatattgc
     3601 cgtggtacgt tgctttcggt cctagccagc gcactggcat attgccgtca gcaaacagtc
     3661 caagcagagg tttttgctga ttcgcttccg tcaccgaatt cagtgaggca gcatcgctga
     3721 ccaactgata accacgcgcc tgtgcctgtt cacgcagcgt ttttccctgc cattcaccgg
     3781 cggttgccgt ttcagcaaag gtttttgcgc caccgccaag cgtaacgtcg gcacgagcgt
     3841 taagcagctg ttcggtaatc gatccttttc cgcctttttc cagagcgtta cccggacatt
     3901 tttcactggt cgcgctcgga ccgtagcatt tgcgcgaggt cacatgcgcc accagcgcag
     3961 cgggcgtggc atcctgcaac tctgcggtag aaacgttacc ggtcgccaga cctgcggctt
     4021 ttgccatttc cagaatcgtt gggtgatctt tttcgtgaat atcgacgccc agcgcgccgt
     4081 tataggtttt gacaccggtt gaccaggcgg ttgctgatgc agccgagtcg gtgacgtagt
     4141 ccggtttgcc ggttttttta ttcagcgcat agtgagtgta ttgcccggta agcggtaagg
     4201 catcgatacc tttaaaaaag ccgcccgcac cttcggcata attacgtgcg gcagtaattt
     4261 ccgaatcccc catcccatcg ccaatcagca aaataatatt ttttgcaggt ttatcgctaa
     4321 gagaatcacg cagagcggcg gtctgatcac ccgttaagcg gcgagcaccg ccgggtgcag
     4381 taatatcgcc ctgagcagcc cggttttcca gaacaggcat ttctggtgtc cgggcttttg
     4441 tcacaggggt aaacagtaac ggtaagagtg ccagtgcaat agtgctttgt ttcactttat
     4501 tttctccatg tacaaataca ttaaaaaata aaaacaaagc gactataagt ctcggccgtg
     4561 acaactttat gacagctgtt gaaaagatta actttttact gacgaggatg cttcaataac
     4621 ttctttacgt aatcgcgcag cagctccgta tcgtcgtcag gaatgctggc atcgggcttt
     4681 acctcgtaca gcgccccctc tacctgatca atcaaccgct gttggtcatt ttgcgccata
     4741 ttgcgaagca ttgcagtgac gataatctcc aaagcttcta cctgcgcaca cagttctttc
     4801 gactcttctt ctttttgggc aagcttaaat aacaactcag caatgagatt tttcatgtct
     4861 gtatttcctt atccaaagta tggagaagtt aacattatgt ttcacaactt catagtgtct
//
LOCUS       DAPGWB010000240         4833 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.242, whole genome shotgun sequence.
ACCESSION   DAPGWB010000240 DAPGWB010000000
VERSION     DAPGWB010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4833)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4833)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4833
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.242"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            192..1166
                     /gene="hemB"
                     /locus_tag="RHX79_004444"
     CDS             192..1166
                     /gene="hemB"
                     /locus_tag="RHX79_004444"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDV2199532.1"
                     /translation="MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDY
                     KAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARM
                     SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGAD
                     FIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKS
                     YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEY
                     AMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR"
     gene            complement(1272..2123)
                     /gene="tauD"
                     /locus_tag="RHX79_004445"
     CDS             complement(1272..2123)
                     /gene="tauD"
                     /locus_tag="RHX79_004445"
                     /EC_number="1.14.11.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine dioxygenase"
                     /protein_id="HDV2199533.1"
                     /translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV
                     VFLRDQTITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV
                     TFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFP
                     EYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKES
                     EALLGFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGD
                     KPFYRAG"
     gene            complement(2120..2947)
                     /gene="tauC"
                     /locus_tag="RHX79_004446"
     CDS             complement(2120..2947)
                     /gene="tauC"
                     /locus_tag="RHX79_004446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter permease TauC"
                     /protein_id="HDV2199534.1"
                     /translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAAL
                     QLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVG
                     IAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS
                     ALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE
                     LIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ"
     gene            complement(2944..3711)
                     /gene="tauB"
                     /locus_tag="RHX79_004447"
     CDS             complement(2944..3711)
                     /gene="tauB"
                     /locus_tag="RHX79_004447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter ATP-binding subunit"
                     /protein_id="HDV2199535.1"
                     /translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL
                     NLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEK
                     MQRLEIVHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD
                     AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFA
                     RRFVAGESSRSIKSDPQFISMREYVLSRVFEQREAFS"
     gene            complement(3724..4686)
                     /gene="tauA"
                     /locus_tag="RHX79_004448"
     CDS             complement(3724..4686)
                     /gene="tauA"
                     /locus_tag="RHX79_004448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV2199536.1"
                     /translation="MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNT
                     FAKESGATVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKL
                     GNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPA
                     IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHP
                     EVVKAFAKSAIDAQQPYIANPDAWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQ
                     QQTVELTGPVNKAIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ"
BASE COUNT         1117 a         1392 c         1237 g         1087 t
ORIGIN      
        1 aataaccaag agctattaat aaagattaaa aatattttca gtgaatatga aattattgct
       61 atttctatta caaagatgtc ctggtctctc tttcattctc ttcttgtcaa catcgcgaca
      121 actttcgtaa aacactcctg ccccgcttca ggtatactgt gcaccttaat tccacaaaca
      181 tcaggcagac catgacagac ttaatccaac gccctcgtcg cctgcgcaaa tctcctgcgc
      241 tgcgcgctat gtttgaagag acaacactta gccttaacga cctggtgttg ccgatctttg
      301 ttgaagaaga aattgacgac tacaaagccg ttgaagccat gccaggcgtg atgcgcattc
      361 cagagaaaca tctggcacgc gaaattgaac gcatcgccaa cgccggtatc cgttccgtaa
      421 tgacttttgg catctctcac cataccgatg aaaccggcag cgacgcctgg cgggaagatg
      481 gactggtggc gcgtatgtcg cgcatctgca agcagactgt gccagaaatg atcgtcatgt
      541 cagacacttg tttctgtgaa tacacttctc acggtcactg cggtgtgctg tgcgagcatg
      601 gcgtcgacaa cgacgcgact ctggaaaatt taggcaagca agccgtggtt gcagctgctg
      661 caggcgcaga cttcatcgcc ccttccgccg cgatggacgg ccaggtacag gcgattcgtc
      721 aggcgctgga cgctgcaggc tttaaagata cggcgattat gtcgtattcg accaagttcg
      781 cctcttcctt ttatggcccg ttccgtgaag ctgccggaag cgcattaaaa ggcgaccgca
      841 aaagctatca gatgaaccca atgaaccgtc gcgaggcgat tcgtgagtca ctgctggatg
      901 aagcccaggg cgcagactgc ctgatggtta aacctgctgg agcgtacctc gacatcgtgc
      961 gtgagctgcg tgaacgtact gaattgccga ttggcgcgta tcaggtgagc ggtgagtacg
     1021 cgatgattaa gttcgccgcg ctggcgggtg ctatagatga agagaaagtc gtgctcgaaa
     1081 gcttaggttc aattaagcgt gcgggtgcgg atctgatttt cagctacttt gcgctggatt
     1141 tggctgagaa gaagattctg cgttaatttt tttcctctca gaaaggggga gttaacctgt
     1201 tgaaagtacg gtgaacgccc cctcacccta accctctccc caagggggcg agggaaccgt
     1261 ccgcactcgt atcaccccgc ccgataaaac ggtttatccc caaggatcgt cgcccgatgc
     1321 ataatccgcc gctgtggcag gtaatcggca ttggcatagt gctgagtcac gcggttatcc
     1381 caaatcgcaa tatcattcgg ttgccagcgc caacgcacct gaaactccgg tttagtgata
     1441 tgggcgaata aaaagcctaa caaggcttcg ctctctttct cgctgacatc gacaattcgc
     1501 gtagtaaagc cttcattcac aaacagcgcc tgtttaccgc tcaccggatg cgttcgcacc
     1561 accggatgta gcaacggagg atttttcgcg accgcctcgc gccagcgttg atgttcctcc
     1621 tcggttttgc ggtatttgta ttccgggaac gatttacgga aatcatgctc cgcacgcagc
     1681 ccgctcagca gctggcggaa gggaacagag agcgcctcat aggccgcaat accgctggtc
     1741 cagagcgtat caccgccggt cgaaggtaac tctttagctg ccagaatcgc ccctgcgggt
     1801 ggcgtttcaa taaatgtcac atcggtatgc cagttgtcgt tatccggcgg attatcgtta
     1861 tgggtatcca gcacgatgat ctcgtcaacc ccttcggcat gagggtaaac agggtgaata
     1921 tgcagttcgc caaaacgctg ggccagcgcg cgttgctgct gcggcgtaat agtttgatcg
     1981 cgcagaaaca ccacctgatg gcgcagcacc gcatggtaaa gctgttcaaa ctgattatcg
     2041 cttaacgggc gcgtcaggtc ggcacccgaa atttgtgcgc cgatatacgg ccccagcggg
     2101 gtaatgctca gacgttcact cattgtactt ctccatgcca gggcgtcaga cggcgctgta
     2161 acgcgcgcaa acctagttct aaaagaaagg cgataatcgc aatcaccgcg attcccgcca
     2221 gcaccacgtc agtcgcgaga aattcacccg ctgactgaac cataaatcct aaaccgcgcg
     2281 tcgcggcaat cagctccgcc gctaccagcg tagaccagcc cacacccaga ccaatgcgta
     2341 atccggtgag gatttccggc agcgcgccgg gcaaaatgac aaaccacagc acctgcgcac
     2401 ggctggcacc cagcgactgg gcggcacgaa tgcgaacctg ctgcgcgctt ttcacccccg
     2461 ccagcgccga catcgccacc ggtgcaaaaa tcgctaaata gatcagtaag atcttcgagg
     2521 tttcaccaat accaaaccag atcaccatca gcggcaaata agccagcggc ggcacgggac
     2581 gataaagttc gattaccgga tccagaatgc cgcgcaccgt cgggcttagc cccatggcga
     2641 tcccgaccgg aataccgatc accaccgccg cgagtagcgc cagcacaatg cgcgtcaggc
     2701 tggctgccag atgctgccac agcgtggcgt ccataaatcc ctgcggtccg gcaatggtga
     2761 gcagttttgc cagtacttgt tgcggcggcg gcaaaaacag cgggctaatc agttgcagcg
     2821 ccgccaccgt ccaccataca gtgagtaaaa ccgctaacgt gccaatgctt aaggtcacct
     2881 gacgcgagag cggccagcgc catttcagcc gccgcgaatg cagtttttca ttaatgagca
     2941 cactcatgag aacgcctccc gttgctcaaa tacgcggctt aaaacatatt cgcgcatgga
     3001 gatgaattgt ggatcggact tgatgctgcg gctcgactct cccgcaacaa agcggcgagc
     3061 aaagttgagc ggcagccgct ccagcacacg gccagggccg gatgaaagca gaaccagttc
     3121 agtcgccata aacaccgctt cttctatatc gtgggtaatc aacagcacct gcttgcccgt
     3181 ctcctgccag agtttcagca gcagagtttg catctggtcg cgggtgaagg cgtccagcgc
     3241 accaaacggt tcgtcgagta ataacagctg gggattcgcc gccagcgcgc gggcaatccc
     3301 cacccgctga cgttgaccac cggaaagctg ccagatatag cgtttttctg cgccttccag
     3361 ccccactttt ttcagcatct ggtgcacgat ttccagtcgc tgcattttct ctatacctgc
     3421 caattgcagg ccgaacgcca cgttgtcctg tacattgcgc cacggtagta gcccttcatt
     3481 ctgaaaaacc accccgcgct ctgctcccgg tccctcaata cgcttacccg ccagttgaat
     3541 gctgccatgc tgataaggca caaaaccggc aatcagattc agcaacgtgg ttttaccgca
     3601 gccggacggc cccagcacca ccagtagctc gccgctttcc agcgtcaggt tgatatcttc
     3661 cagtgccggt ttgccgccat aatcggcgta aagatgagag atttgcagca tctgcgcctc
     3721 cttttattgc acgaagcgcg aggtaacgta ctggctgtaa tcattcgcta cagccgggac
     3781 cttgccctgc tctttcaaaa actgcgcggt gtcgatgatc gctttgttca ccggtccggt
     3841 cagttctacc gtttgttgct gcggcgtcag ataggtattc cccttcacca gccccggaac
     3901 gtcaccttcc ggcacgccgc ttaaacgcgc cagtttgctg atgttttccg gctgtttcag
     3961 ccacgcgtct gggttagcaa tgtacggttg ctgagcatcg atggcgcttt tagcgaacgc
     4021 tttcacgacc tcaggatgtt tctcggcaaa atctttgcgc accacccaga cgtccagcgt
     4081 tggcgcaccc cactgcccga cctgttcaga atcggtcaac accttgccgt ctttttccag
     4141 ggcgttaacc gccggtgccc agacataagc accatcaata tcaccccgct gccatgcggc
     4201 gataatcgcg ggcggctgca ggttcacaat ctccacttgc ccgggtttaa tcccccagtg
     4261 tttcagcgcc gccagcaggc tgtagtgggt ggtggagata aacggtacgg caatgcgttt
     4321 gccaatcaaa tcttcgggtt tgctgatagt tttctttacc accagcgctt cggagttacc
     4381 cagttttgac gccagcaaga agacttcaat cggcacctgt tggctggctg caaccgctaa
     4441 tgggctggaa ccgaggttgc cgatttgcac gtcgccagaa gccagcgccc gcacgatgct
     4501 ggctccgctg tcaaacttac gccagtccac ggttgctccg ctttctttag caaaggtgtt
     4561 gtcggcctga gccactttcg ccggttcggc tgaggtttga tacgccacgg tgacgttcac
     4621 cgcctgtgcc tgaaaagcga tgaatgccag tgcggcaaga agtgtgttac gcgatgaaat
     4681 tgccatgatt gtctgctccc ctgtcttgtt atgtgagcag tattcaggaa taaaaacatt
     4741 cattaaaaga attagtcgtt atcgcacaga tgattttatt cttagcaaaa aaacggcaaa
     4801 ggaaagatta aatatgcaat tactccgttc taa
//
LOCUS       DAPGWB010000241         4831 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.243, whole genome shotgun sequence.
ACCESSION   DAPGWB010000241 DAPGWB010000000
VERSION     DAPGWB010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4831
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.243"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            67..1983
                     /gene="mngA"
                     /locus_tag="RHX79_004449"
     CDS             67..1983
                     /gene="mngA"
                     /locus_tag="RHX79_004449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001393949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS 2-O-a-mannosyl-D-glycerate transporter
                     subunit IIABC"
                     /protein_id="HDV2199537.1"
                     /translation="MNLTTLTHRDALCLNARFTSREEAIHALTQRLAALGKISSTEQF
                     LEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVV
                     LLAIPPNEAGTTHMQLLTALTTRLADDEIRARIQSATTPDELLSALDDKGDTQPSASF
                     SNAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNVYVEKQGANGIEGRLTADQLNS
                     ATACIFAAEVAIKESERFNGIPALSVRVAEPIRHAEALMQQALTLKRSDETRTVQQDT
                     QPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMY
                     RKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMIGSGFLGAVVGGLIAG
                     YLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNG
                     LSGSNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFASVKMVSAFT
                     VTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTG
                     AIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLIWRRH
                     AVKHGNYLTDGVMP"
     gene            2001..4634
                     /gene="mngB"
                     /locus_tag="RHX79_004450"
     CDS             2001..4634
                     /gene="mngB"
                     /locus_tag="RHX79_004450"
                     /EC_number="3.2.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosylglycerate hydrolase"
                     /protein_id="HDV2199538.1"
                     /translation="MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQD
                     NEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIV
                     RNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDK
                     TEFLWQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLP
                     NGHDQMPLQQNIFEVMDKLREIYPQRKFVMSRFEEVFEKIEAQRESLATLKGEFIDGK
                     YMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFEYHHGLLEKMWKEILK
                     NHAHDSIGCCCSDKVHREIVARFELAEDMADNLLRFYMRKIADNMPQSDADKLVLFNL
                     MPWPREEVINTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPF
                     MEFDIQINQIVPSMGYRTLYIEANQPGNVIAAKSDAEGILENAFWQIALNEDGTLQLV
                     DKDSGVRYDRVLQIEESSDDGDEYDYSPAKEEWVMTSATAKPQCEITHEAWQSRAVIR
                     YDMAVPLNLLERSVRQSTGRVGVEMVVTLSHNSRRIDVDINLDNQADDHRLRVLIPTS
                     FNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYAALQEGRNGMAVF
                     SEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLFLRPGRPSGIKMPVPDSQLRGLLSC
                     RLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMPP
                     VGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQ
                     GSNLSGPFLPGQSRTFSYRLA"
BASE COUNT         1180 a         1139 c         1340 g         1172 t
ORIGIN      
        1 cacataatgg tattgtttta tcgggcacac tggcgcgact ataaaaacga tcaagtgagg
       61 atcatgatga atctgacgac tctgacccac cgcgatgcgt tgtgtctgaa tgcgcgcttt
      121 accagccgtg aagaggccat ccacgcgttg actcaacgtc ttgctgctct ggggaaaatt
      181 tccagtactg agcaatttct ggaagaagtg tatcgccgtg aaagccttgg cccgaccgcc
      241 ttaggtgaag ggttggctgt gccgcatggc aaaactgctg cggtaaaaga agcggcgttt
      301 gcggtcgcca cactcagcga gccgcttcag tgggaaggcg ttgatggccc ggaagcggtt
      361 gatttagtgg tgctgctggc gattcccccc aatgaagcgg gtactacgca tatgcaactg
      421 ctgacagcgc tgaccacgcg cctggcggat gatgagattc gggcgcgtat acagtcggcg
      481 acgacgcctg atgagttgct ctcggcgctg gatgacaagg gagacacgca accttctgcc
      541 tctttttcca acgcgccaac tatcgtctgc gtaacggcct gtccggcggg tattgctcac
      601 acctatatgg ctgcggaata tctggaaaaa gccggacgca aactcggcgt aaatgtttac
      661 gttgaaaaac aaggcgctaa cggcattgaa gggcgtttaa cggcggatca actcaatagt
      721 gcaaccgcct gtatttttgc ggctgaagtc gccatcaagg agagtgagcg ttttaatggc
      781 attcccgcgc tttcagtgcg tgttgccgag ccgattcgcc atgcagaagc gttgatgcaa
      841 caagcgctta ccctcaagcg tagcgatgag acgcgtaccg tacagcaaga tacgcaaccg
      901 gtgaaaagtg tcaaaacgga gctgaaacag gcactgttga gcggaatctc ttttgccgta
      961 ccgttgattg tcgcgggggg cacggtgctg gcggtcgcgg tattactgtc gcaaatcttc
     1021 gggctacaag atctgtttaa tgaagaaaac tcctggctgt ggatgtaccg caagctgggc
     1081 ggcgggctgc tcggaatttt gatggtaccg gtgctcgcgg cctataccgc ctattctctg
     1141 gcagataaac cggcgttagc gccaggcttt gcggctggac ttgccgccaa catgatcggc
     1201 tccgggtttc tcggcgcggt cgttggcgga ttgatagccg gttacttgat gcgctgggtg
     1261 aaaaatcact tgcgtcttag cagtaaattc aatggattcc tgacttttta tctctacccg
     1321 gtgctcggta cgttgggagc gggcagtctg atgctgtttg tggtgggaga acctgtcgcc
     1381 tggatcaata actcgcttac cgcctggctg aacggtctgt caggaagtaa cgcgctgttg
     1441 ctgggtgcca ttctcggttt tatgtgttcc tttgaccttg gagggccagt gaacaaagcc
     1501 gcttatgcat tctgcctggg cgcaatggcg aacggcgttt acggcccgta tgccattttc
     1561 gcctccgtca aaatggtttc ggcatttacc gtaaccgctt ccacgatgct cgcaccgcgc
     1621 ctgtttaaag agtttgaaat tgagaccggg aaatccacct ggctgttagg gctggcaggt
     1681 attaccgaag gggcgatccc gatggcgatt gaagatccgc tgcgggttat tggttcgttt
     1741 gtgctgggct ctatggtaac gggcgctatt gtcggtgcga tgaatatcgg cctttcgaca
     1801 cccggtgccg gcattttctc gctcttttta cttcatgata atggcgcggg cggtgttatg
     1861 gcggcaattg gctggtttgg tgcggcattg gtgggggctg caatctcgac tgcaattctc
     1921 ctgatctggc ggcgtcacgc ggttaagcat ggcaactatc tgactgatgg cgtaatgcca
     1981 taaacaaaaa ggaaacgacg atgaaagcgg tatctcgcgt tcacatcacc ccgcatatgc
     2041 attgggatcg ggagtggtat ttcaccaccg aagagtcacg cattctgctg gtcaataata
     2101 tggaagagat cctgtgccga ctggaacagg acaacgaata caaatattac gtactcgacg
     2161 ggcaaacggc gatcctcgaa gattatttcg cggtgaaacc ggaaaacaaa gaccgcgtga
     2221 agaaacaggt agaagccggt aagttgatta tcggcccctg gtatacccag accgatacca
     2281 cgattgtttc tgcggaatcc atcgtccgta atctgatgta cggaatgcgt gactgcctcg
     2341 cgtttggcga gccgatgaaa ataggttatt taccagattc ctttggcatg tccgggcaac
     2401 tgccgcatat ctacaatgga tttggcatta cccgcaccat gttctggcgc ggatgttcgg
     2461 agcgccacgg tactgataaa accgagtttt tgtggcaaag cagtgacggt agcgaagtga
     2521 cggcgcaggt gctgccgctg ggctacgcca tcggtaagta cttacctgcc gacgaaaacg
     2581 gattacgtaa acgcctcgac agttattttg acgtgctgga aaaagcgtct gtaaccaaag
     2641 agattttgct gccgaatggg catgaccaga tgccattgca gcaaaatatc ttcgaagtga
     2701 tggataagct acgtgagatc taccctcaac gtaagtttgt gatgagccgc tttgaagagg
     2761 tatttgagaa gatcgaagcg cagcgtgaaa gtctggccac cctgaaaggt gaatttatcg
     2821 atggcaaata tatgcgcgta catcgcacca tcggttccac gcgcatggat atcaaaattg
     2881 cccacgcacg tattgaaaat aagattgtta atctgctgga accgctggca acgctggcct
     2941 ggacgttggg ttttgaatac caccacggct tgctggagaa aatgtggaaa gagatcttaa
     3001 aaaatcatgc ccacgacagt atcggttgtt gttgcagtga caaagttcat cgcgaaattg
     3061 tcgcccgctt cgaactggct gaagacatgg cggataatct gctgcgtttc tacatgcgca
     3121 aaattgccga taacatgcca cagagtgatg ccgacaaact cgtgctgttt aacctgatgc
     3181 cctggccgcg ggaagaagtt attaacacca ctgtgcggct gcgcgccagc cagtttaatc
     3241 tacgagacga tcgcggtcag cctgtaccgt attttattcg ccatgcccgt gagatcgatc
     3301 caggcctaat cgatcggcaa atagttcatt acggtaatta cgatcccttt atggagtttg
     3361 atatacagat caaccagatt gtcccttcta tgggctatcg cacgctttat atcgaagcga
     3421 atcagcctgg caacgtgatt gcggcaaaaa gtgacgctga agggatactg gaaaatgctt
     3481 tctggcaaat tgcgctcaat gaggatggaa cgctacaact ggtagataaa gatagcggtg
     3541 tgcgctatga ccgggtgttg caaattgaag aaagctctga tgatggtgat gaatatgact
     3601 attcacccgc aaaagaagag tgggtaatga cttctgcaac agcgaaaccg caatgcgaga
     3661 ttactcatga ggcctggcag agcagggctg ttatccgcta tgacatggcg gtgccgctca
     3721 atttgttgga acgaagcgtc cggcaatcca cgggcagagt aggggtggag atggttgtca
     3781 ctctgagtca taacagcaga cgtattgatg tggatatcaa ccttgataac caggctgacg
     3841 atcatcgcct tcgcgtcctg atccctacat cttttaacac cgatagtgtt ctggcagata
     3901 cccagtttgg ttcgctaacg cgccccgtga acgacagtgc aatgaacaac tggcagcaag
     3961 aaggctggaa agaagcgccg gttccggtat ggaatatgct caactatgca gccttacagg
     4021 aagggcgtaa cggcatggct gtctttagcg aagggctacg tgaatttgaa gtcatcggtg
     4081 aagagaagaa aacctttgcc attacgttgc tgcgtggcgt gggcttactg ggcaaagaag
     4141 atctgttttt aaggcctggg cggccttcgg gaattaaaat gccagtcccg gactcacaac
     4201 tacgtggtct gctttcttgt cgcctaagtt tattgagtta taccggtacg ccaaccgccg
     4261 ctggtgtagc tcagcaggcg cgagcatggc tgactccagt acagtgttac aacaaaatcc
     4321 catgggatgc gatgaagctc aacaaagccg gattcaacgt gccggaaagt tatagtttgt
     4381 tgaaaatgcc cccagtggga tgcctgataa gcgcacttaa gaaagctgaa gaccgacaag
     4441 aagtgatttt acggctgttt aatccggctg aatcagcaac ctgtgatgcg actgttgctt
     4501 tcagtcgcga ggtgatttct tgctcagaaa cgatgatgga tgaacacatt accaccgagg
     4561 aaaatcaagg ttcaaatcta tcggggcctt ttttacccgg ccagtcacgg acgttcagtt
     4621 accggcttgc ctgaatagca atcaaaccga agccacatat gcgcggccag attgttgaca
     4681 aagggcgctt tgttcatgcc ggatacggca tgaacgcttt attcggtcta caaaagcagg
     4741 caaattcaat atattgcaga gatgatgtag acactggcaa gcgtagcgca tcaggtaatt
     4801 ttgcgtttat cttcactctc aagccacgta t
//
LOCUS       DAPGWB010000242         4725 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.244, whole genome shotgun sequence.
ACCESSION   DAPGWB010000242 DAPGWB010000000
VERSION     DAPGWB010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4725
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.244"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..652
                     /gene="hprR"
                     /locus_tag="RHX79_004451"
     CDS             <1..652
                     /gene="hprR"
                     /locus_tag="RHX79_004451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707854.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor HprR"
                     /protein_id="HDV2199539.1"
                     /translation="DNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILD
                     IMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLA
                     RVRAQLRQHHALNSTLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLASRAGEII
                     PRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK"
     gene            652..2010
                     /gene="hprS"
                     /locus_tag="RHX79_004452"
     CDS             652..2010
                     /gene="hprS"
                     /locus_tag="RHX79_004452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     HprS"
                     /protein_id="HDV2199540.1"
                     /translation="MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTT
                     LINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDGINKIVNRTNVSDDMLN
                     NIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKIN
                     SIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPL
                     GQALNKMHQALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIA
                     GNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICF
                     KVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNGYLNIDVASPGTK
                     IHEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRITLPQ
                     RN"
     gene            complement(2117..2968)
                     /gene="hchA"
                     /locus_tag="RHX79_004453"
     CDS             complement(2117..2968)
                     /gene="hchA"
                     /locus_tag="RHX79_004453"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase HchA"
                     /protein_id="HDV2199541.1"
                     /translation="MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKP
                     YRGKHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMT
                     KFEYWAMPHKDEKVMPFFEQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIG
                     LPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTP
                     EIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKVLTGDSPFAANALGKLAAQE
                     MLAAYAG"
     gene            complement(3560..4723)
                     /gene="ompC"
                     /locus_tag="RHX79_004454"
     CDS             complement(3560..4723)
                     /gene="ompC"
                     /locus_tag="RHX79_004454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001080680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HDV2199542.1"
                     /translation="MKRKVLAMLVPALLVAGAANAAEIYNKNGNKLDLYGKVDARHTF
                     SDNPGDDGDETIIELGFKGETQITDQLTGYGQALTKTKASDTEGSDNTYVKLAFAGLK
                     FGEMGSFDYGRNYGVIYDVEAWTDMLPVFGGDSYTWTDNFMAGRANGVATYRNSDFFG
                     LVEGLNFALQYQGNNEGSNAGEDQEGTKNGHEDVRFQNGDGFGLSTSYDFDFGLSLGA
                     AYSNSDRTNSQVALGGYHYNEYSKFAGGDTAEAWTFGAKYDANNVYLAMMYAETRNMT
                     PYGNVGIANKTQNFEAVAQYQFDFGLRPSLAYVYSKGKDLGGNDYNNNGHQEYVDQDL
                     VNYVEIGATYYFNKNFSTYVDYKINLLDKDDDFYDNNGIATDDVVGVGLVYQF"
BASE COUNT         1331 a          958 c         1092 g         1344 t
ORIGIN      
        1 agataatcaa aggacccagg aatgggtaac acaggggctt tccgaagcgg gttatgtcat
       61 tgatgccgtt tctgatggca gagatgggct ttatcttgcg ttgaaggatg attatgcatt
      121 gataattctg gatattatgc ttccgggtat ggatggctgg cagatcttac aaacgttaag
      181 aacagcaaag caaacccctg ttatttgcct tactgcaagg gattctgtcg atgacagagt
      241 cagagggctg gacagtggag caaatgatta tctggtaaaa cctttttcat tttctgagtt
      301 gctggcaagg gttcgggcac aattaaggca acatcacgct ttgaattcaa cattagaaat
      361 cagtggttta agaatggact ctgttagtca aagtgtgagc agggacaata tcagtattac
      421 actgacgcgc aaggagtttc agttactttg gctactggcc tccagagctg gcgaaattat
      481 acccagaacg gttattgcga gtgaaatttg gggaatcaac tttgatagtg ataccaatac
      541 ggtggatgtc gccattcgca ggctccgcgc aaaagttgat gatccttttc ctgaaaagct
      601 aatcgccaca atccggggga tgggctattc attcgtagcg gtaaaaaaat aatgaaaaga
      661 ttatctataa ccgtccgttt aaccttgctt tttatattgc tgctgtctgt tgctggcgct
      721 ggaattgtat ggactctcta taatggcctg gcaagtgagt tgaaatggcg cgatgataca
      781 acactcatta accggacagc gcagatcaag cagttgttaa ttgatggggt aaatccagat
      841 acgttacctg tgtactttaa ccggatgatg gatgttagtc aggatatctt gatcattcat
      901 ggtgatggca tcaataaaat tgttaaccgg acgaatgtca gtgatgacat gttaaataac
      961 atacctgcta gtgagacaat cagcgcagct ggcatttaca gaagcattat taatgataca
     1021 gagatagatg ctttacgaat taatattgat gaagtttcgc catcattaac ggttactgtg
     1081 gctaaattgg cttcagccag acataacatg cttgaacagt ataaaattaa tagcattata
     1141 atttgcattg tcgccattgt actttgctca gtattaagtc cgctgttaat cagaacggga
     1201 ttacgagaga tcaaaaagtt gagtggtgta acggaagcgc tgaattataa cgatagccgg
     1261 gagcctgttg aggttagcgc attaccgaga gaactaaaac ctcttgggca ggcgttgaat
     1321 aaaatgcatc aagccttagt caaagatttt gaacgcctaa gtcaatttgc tgacgatctc
     1381 gctcatgaac ttagaacgcc cattaatgca ttactgggtc agaatcaggt tacgctcagt
     1441 caaaccagaa gtatcgctga atatcaaaaa acaattgccg gtaacattga agagctggaa
     1501 aatatttcgc ggttaacaga gaacatactg tttcttgccc gggcagataa aaacaatgtt
     1561 ttggtgaaac tggactcgct ttctctcaat aaggaagtcg aaaatttgtt ggattatctt
     1621 gaataccttt cagacgagaa agagatttgc tttaaggtcg agtgcaatca gcaaatcttt
     1681 gcggataaaa ttttactgca acgaatgtta tcgaatctta ttgttaatgc cattagatat
     1741 tcaccagaaa aatcgcgtat tcatataacc agttttcttg ataccaacgg ctatcttaat
     1801 attgatgtcg ccagtcctgg aacgaaaatt catgagcctg aaaaactctt ccgtagattt
     1861 tggcggggag ataattcgcg tcattccgta ggtcagggac ttggtctttc tttagtcaaa
     1921 gcgattgccg aattacatgg gggaagtgct acgtatcact atctcaataa gcataatgtg
     1981 ttccggatta cgttaccgca aagaaattaa cataaggctt cagtacgcca taaattaacc
     2041 gtgaaaaaac gcagccacgt cgtgagtact aacgcggctg cgattgatta gcgcttacat
     2101 tcaaacgtaa cagggattaa cccgcgtaag ctgccagcat ttcctgcgcc gccagtttac
     2161 ccaacgcatt cgctgcaaaa ggactgtcgc cggtgagaac tttacggtcc ttatgtactc
     2221 gcccggtgat gtcgtcatta ataatgttca tgcccatttt cttcagctct tcgccgaagt
     2281 accaggtgag atgacccggc atatagccta tctctggcgt ttgtttgtct gcggcgtctg
     2341 ggaatgcgca aatggaataa ccattcagtg ggttatcgcc gtggcgaagc gccagaaaag
     2401 ccgccgggcc gtggcaaagg gagataacaa aacggtcatt tttgattgcc cactgcaaag
     2461 cagcagctac gtcctggctt tctggtaaac caataagtgc gccatgacca ccaggaacaa
     2521 agattgctgc atattcgcta tcagcgttga ggctggcgac aacatccgcg agtttcttcg
     2581 gattgcggaa caacgattta tgttgctcaa agaatggcat tactttttca tctttgtgcg
     2641 gcatagccca gtattcaaac ttggtcatca gaccggaaat ggtcgccact tcgaattcga
     2701 aacctgcagc atggagatga tacaacggca gcaacgtttc aatcggatgg ttaccggtcg
     2761 agaacagttt tccgttatcg gttggcaaat aacgttcgtc cgcggcgatc accagaattt
     2821 tatgtttacc gcgatacggt tttggatagt ccacgccatc aagatcagag acaggactgg
     2881 tatattggct aagcgaatat tctgaaggga agaatgcatt atcttcagca atatcgacct
     2941 gcggattttt acttgtttga acagtcatag tgtattcctt attgttgctt agttagggta
     3001 gtcactatat ttgcgactga gctggtcgct atttttaacc aggctggaaa attgagtcaa
     3061 tatatcgaaa gcggtagtcg gcgggtgtaa gtatgtaatg atgatgctgc actggtgttg
     3121 aatattattc acgccaaatt ttccttattg agcaacgtcg tcgcaagtgg cctcaatgat
     3181 tttagaccat tatcagaggt acggggcggc ggggagagat ttagtgatgt ggaatattgt
     3241 ggtgctgatg aatatttata tcccggattg gtagagaaaa agcttatttc atgcactatt
     3301 tttgcaaata tttctatatg ggaggcggtt ttgttgcaga ttaattcata aagaaatgca
     3361 tttgggtgtt ggctggaaga gtcgctggta gatgttattg tgccagcagg ggcagggtaa
     3421 ggtgctgtat cgatatgctt tggcaattgc gcgtgccgca gagggagata aaatgccaat
     3481 aaaaaagcct gagttcgatg agggacgaac tcaggctagt gttaagtttt acagtaacac
     3541 gccgcggcgc gttggctgat tagaactggt agactaagcc cacaccaaca acgtcatctg
     3601 ttgcgatgcc attgttgtca tagaaatcgt catctttatc caacaagttt attttatagt
     3661 caacatatgt tgagaagttc ttattgaaat agtaggtcgc tccaatttca acatagttga
     3721 ccagatcctg atcaacatac tcttgatgac cattgttgtt atagtcgtta ccgccgaggt
     3781 ctttgccttt tgaataaaca tatgcaagag atgggcgcag accaaaatcg aactgatact
     3841 gtgctacagc ttcaaagttc tgggttttat ttgcgatacc cacattacca tatggtgtca
     3901 tattgcgggt ttcagcatac atcattgcaa gataaacatt gttggcgtcg tattttgcac
     3961 caaatgtcca tgcttcagct gtatcaccac cagcaaattt gctgtattca ttgtagtgat
     4021 acccgccaag agctacttga gaattggtac ggtcagagtt tgagtaagcg gcacctaagc
     4081 tcaaaccgaa gtcaaagtca tatgaagtgg aaagaccaaa accatcaccg ttctggaagc
     4141 gaacgtcttc gtgaccattt ttagtacctt cttgatcttc tcctgcattg ctgccttcgt
     4201 tgttaccttg atactgcaat gcaaagttca gaccttccac cagaccgaag aaatcactat
     4261 tgcggtaagt agctacccca tttgcacggc ctgccatgaa gttatcagtc caggtatagg
     4321 agtcgccgcc gaatacagga agcatatctg tccaggcttc aacgtcgtaa atcacaccat
     4381 agttacgacc atagtcaaag gagcccatct cgccgaactt cagacctgca aaagcaagtt
     4441 tgacataagt attatcagaa ccttcagtgt cgctagcctt tgttttggtc agtgcttgac
     4501 cataaccagt taactgatct gtaatttggg tctcaccttt aaagcctaac tcgatgatag
     4561 tttcatcgcc gtcatcgcca gggttatcgg aaaaagtatg acgagcatca acttttccgt
     4621 acagatccag tttattgcca tttttattat aaatttcagc cgcatttgct gcgccagcaa
     4681 ctaataacgc cgggaccagc attgccagaa cttttctttt catta
//
LOCUS       DAPGWB010000243         4721 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.245, whole genome shotgun sequence.
ACCESSION   DAPGWB010000243 DAPGWB010000000
VERSION     DAPGWB010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4721
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.245"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..273
                     /locus_tag="RHX79_004455"
     CDS             <1..273
                     /locus_tag="RHX79_004455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000009331.1"
                     /note="type IV secretion system coupling protein; similar
                     to F plasmid TraD; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraD"
                     /protein_id="HDV2199543.1"
                     /translation="PAINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGE
                     VVDMAAYEAWQQENHPDIQQHMQRREEVNINVHRERGEDVEPGDDF"
     gene            273..>4721
                     /gene="traI"
                     /locus_tag="RHX79_004456"
     CDS             273..>4721
                     /gene="traI"
                     /locus_tag="RHX79_004456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer relaxase/helicase TraI"
                     /protein_id="HDV2199544.1"
                     /translation="MLSFSVVKSAGSAGNYYTDKDNYYVLGSMGERWAGQGAEQLGLQ
                     GSVDKDVFTRLLEGRLPDGADLSRMQDGSNKHRPGYDLTFSAPKSVSMMAMLGGDKRL
                     IDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQDPQLHTHV
                     VVANVTQHNGEWKTLSSDKVGKTGFSENVLANRIAFGKIYQSELRQRVEALGYETEVV
                     GKHGMWEMPGVPVEAFSSRSQAIREAVGEDASLKSRDVAALDTRKSKQHVDPEVRMAE
                     WMQTLKETGFDIRAYRDAADQRAEIRTQAPGPASQDGPDVQQAVTQAIAGLSERKVQF
                     TYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSV
                     RALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA
                     ELVMMAREQGREVQIIAADRRSQMNLKQDERLSGELITGRRQLQEGMVFTPGSTVIVD
                     QGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQR
                     PATIISEPDRNVRYDRLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVL
                     GHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLT
                     LRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV
                     SEDAMTVVVPGRAEPATLPVADSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMD
                     NATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGETSLETAISLQ
                     KTGLHTPAQQAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR
                     GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVTPLMERVPGELMETLTSG
                     QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPASERPRVVGLGPTHRAV
                     GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA
                     AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINR
                     DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGETFPDV
                     PMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGKEQVMVP
                     VLNTANIRDGELRRLSTWENNPDALALVDSVYHRIAGISKDDGLITLEDAEGNTRLIS
                     PREAVAEGVTLYTPDKIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQ
                     QTRVIRPGQERAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL
                     SRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVLEPKPDREVMNAQR"
BASE COUNT         1066 a         1209 c         1589 g          857 t
ORIGIN      
        1 cctgccatca acgataagaa gtcagattca ggtgtgaatg ttccggcagg ggggatcgag
       61 caggagctga aaatgaaacc ggaagaagag atggaacagc aactgccacc cgggatcagt
      121 gaatccggtg aagtggtgga tatggccgct tatgaggcat ggcaacagga aaatcatccg
      181 gacatccagc agcatatgca gcgtcgtgaa gaggtgaaca ttaatgtgca ccgggagcgc
      241 ggggaggatg ttgagccggg agatgatttc tgatgttgag tttcagcgtt gttaaatcgg
      301 caggcagtgc cggaaactat tacaccgaca aggataatta ctatgtgctg ggcagcatgg
      361 gagaacgctg ggctggtcag ggggctgaac agcttgggct gcagggcagc gtcgataagg
      421 atgtttttac ccgtcttctg gagggcaggc tgccggacgg ggcggattta agccgcatgc
      481 aggatggcag taataagcat cgtcccggct acgacctgac cttctccgcc cccaaaagtg
      541 tctccatgat ggccatgctc gggggggata aacgtcttat tgatgcacat aaccaggccg
      601 tggattttgc tgtccgtcag gtggaggcgc tggcttccac acgggtgatg acggacggac
      661 agtcagaaac ggtgctgacc ggtaatctgg tgatggcact gtttaaccat gacaccagtc
      721 gcgatcagga cccacagtta cacacgcatg tagtggtggc taatgtcacg cagcataacg
      781 gcgagtggaa gacactgagc agtgacaaag tggggaaaac cggattttcc gagaacgtgc
      841 tagcgaaccg gattgcgttc gggaaaatat atcagagtga gttacgtcag cgcgttgagg
      901 cgctgggtta tgaaaccgaa gtggtcggta agcacggtat gtgggagatg ccgggcgtac
      961 cggtggaggc cttttccagt cgttcacagg ctatcaggga ggccgtcggt gaagacgcct
     1021 cgctgaaatc ccgggatgtg gcggcactgg atacgcgaaa atccaaacag cacgtcgatc
     1081 ctgaagtcag aatggctgaa tggatgcaga cgctgaagga aaccgggttc gacatccggg
     1141 catatcgtga cgcggcggat cagcgtgcgg agatccgcac gcaggcgccc gggcctgctt
     1201 cacaggacgg gccggatgtg cagcaggcgg tgacacaggc gattgccgga ttaagtgaac
     1261 gaaaagtgca gttcacgtat acggacgtgc tggccaggac ggtcggcata ctgccgccgg
     1321 aaaatggtgt gattgaacgg gcacgcgccg gtatcgatga ggccatcagc cgtgagcagc
     1381 ttatccccct cgaccgtgag aaggggctgt tcacatcagg aattcatgtg ctcgatgagc
     1441 tgtccgtccg ggcactcagt cgtgacatca tgaaacagaa ccgggtgacc gtacatccgg
     1501 agaaaagtgt cccccggacg gctggttaca gcgatgcggt cagtgttctg gcacaggacc
     1561 gtccgtcgct ggccattgtg tccgggcagg gcggtgcagc cgggcagcgt gagcgggtgg
     1621 ctgaactggt catgatggcc cgggagcagg ggcgggaggt gcagattatc gctgctgacc
     1681 gtcgctcgca gatgaacctg aagcaggatg aacggctgtc cggtgagctg ataaccggac
     1741 gtcgtcagct gcaggagggc atggtcttca cgccgggcag tactgttatc gtcgaccagg
     1801 gcgaaaaact ctccctgaaa gagacgttaa ccctgctgga tggtgccgca cgtcataacg
     1861 tacaggtcct gataaccgac agcgggcagc gaaccggtac aggcagtgcg ctgatggcca
     1921 tgaaggatgc cggggtgaac acgtatcgct ggcagggcgg agaacagcga ccggcaacca
     1981 tcatcagtga accggaccgg aatgtccgct atgaccggct ggccggagat tttgcggcca
     2041 gcgtgaaagc cggagaagag agcgtggcac aggtcagcgg ggtacgggaa caggccatac
     2101 tgacacaggc cattcgcagt gagctgaaaa cacagggcgt gctcggacac ccggaggtga
     2161 ccatgaccgc cctgtcaccg gtctggctgg acagccggag ccgttatctg cgggatatgt
     2221 accgaccggg gatggtgatg gagcagtgga acccggagac acgcagtcat gaccgctatg
     2281 ttatcgaccg ggtgacggcg cagagtcaca gcctgaccct gcgggatgcg cagggcgaaa
     2341 cgcaggtggt gcgtatttcc tccctggaca gcagctggtc gctgttccgg ccggaaaaaa
     2401 tgccggtggc agacggcgag cgactgaggg tgacagggaa aattcccgga ctccgcgtct
     2461 ccggcggtga ccgcctgcag gtggcatccg tcagtgaaga tgcgatgacg gttgttgtgc
     2521 cggggcgggc tgaaccggcc accctgcctg tggctgattc accgttcacg gcactgaagc
     2581 tggagaacgg ctgggtggaa acgcccgggc attccgtcag tgacagtgcg acggtgtttg
     2641 cctccgtcac acagatggca atggacaacg ccaccctgaa cggtctggcc cgcagcggtc
     2701 gtgatgtccg gctgtattcc tcactggatg aaacccgtac tgcggaaaaa cttgcccgcc
     2761 atccctcctt tacggtggtt tctgagcaga taaaggcgcg ggccggtgag acatcgctgg
     2821 aaaccgctat cagtctgcag aaaaccgggc tgcacacgcc ggcacagcag gccattcatc
     2881 tggcccttcc tgtgctggaa agtaaaaacc tggccttcag catggtggac ctgctgacag
     2941 aggcgaagtc gtttgctgca gaaggaaccg gttttactga actgggaggg gaaatcaatg
     3001 cgcagataaa acgcggtgac ttactgtatg tggatgtggc aaaaggctat ggcacaggcc
     3061 tgctggtttc ccgtgcgtcg tatgaggcag aaaaaagtat tcttcgccat attctcgaag
     3121 gtaaggaggc ggtcacgccg ctgatggaga gagtacccgg cgaactcatg gagacgttaa
     3181 cgtcgggaca gcgtgccgcc acccgtatga tactggaaac gtccgaccgt ttcacggtgg
     3241 tacagggtta tgccggtgtg ggtaagacca cacagttccg ggcggtgatg tcagccgtga
     3301 acatgctgcc ggcgagtgag cgtccccgag ttgtggggct ggggcccacg caccgtgcgg
     3361 tcggtgagat gcgcagcgcc ggcgtggatg cacagacgct ggcgtccttt ctgcatgaca
     3421 cgcagctgca gcagcgcagc ggagaaacgc cggatttcag caacacgctg ttcctgctcg
     3481 atgagagctc aatggtgggc aataccgaca tggcacgggc atacgccctg attgcggccg
     3541 gtggcggtcg tgccgtggcc agtggtgaca cggaccagct gcaggccatc gcgcccggtc
     3601 agcctttccg tctccagcag acgcgcagtg ctgccgatgt ggtcatcatg aaggagattg
     3661 tgcgtcagac gccggaactg cgggaggcgg tatacagcct gattaaccgg gatgtggaaa
     3721 gggcactgtc cgggcttgag agtgtgaaac cgtctcaggt tccccgtcag gagggcgcat
     3781 gggcaccgga gcactccgtg acggagttca gtcacagcca ggaagcgaaa ctggcagaag
     3841 cgcagcagaa ggcgatgctg aaaggtgaga cttttccgga tgtccccatg acactgtatg
     3901 aagccattgt ccgcgactat accggcagga caccggaagc acgggagcag acgctgattg
     3961 tcacgcacct gaatgaggac cggcgcgtac tgaacagcat gattcatgat gcacgggaaa
     4021 aggccggtga gctggggaaa gagcaggtca tggtgcctgt cctgaacaca gcgaatatac
     4081 gtgacgggga gctgcgtcgt ctctccacct gggagaataa cccggatgcc cttgccctgg
     4141 tggatagtgt gtatcaccgg attgccggta tcagcaagga tgacgggctg ataaccctgg
     4201 aggatgcgga aggtaacacg cggctgattt cgccccggga ggcggtggct gaaggtgtca
     4261 cactgtacac cccggacaaa atccgggtgg ggaccggcga ccggatgcgc ttcacgaaga
     4321 gtgaccggga gcgcggttat gtggccaaca gcgtctggac ggtgacagcg gtttccggtg
     4381 acagtgtcac gttgtcagac ggacagcaga cccgggtgat tcgccccggc caggagcggg
     4441 cagagcaaca tattgacctg gcttatgcca tcaccgccca cggtgcgcag ggggcgagtg
     4501 aaacctttgc catcgcgctt gaaggcacgg aaggtaaccg gaaactgatg gccggctttg
     4561 agtcagccta cgtggccctg tcgcgtatga agcagcatgt gcaggtgtac accgataacc
     4621 gtcagggctg gacggatgcc attaacaatg ccgtacagaa aggaactgcc cacgatgtgc
     4681 tggagccgaa accggaccgg gaggtcatga atgcgcagcg g
//
LOCUS       DAPGWB010000244         4706 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.246, whole genome shotgun sequence.
ACCESSION   DAPGWB010000244 DAPGWB010000000
VERSION     DAPGWB010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4706
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.246"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            512..1228
                     /gene="nanC"
                     /locus_tag="RHX79_004457"
     CDS             512..1228
                     /gene="nanC"
                     /locus_tag="RHX79_004457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313297.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminic acid outer membrane channel
                     NanC"
                     /protein_id="HDV2199545.1"
                     /translation="MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLK
                     VSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHF
                     SSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYH
                     INSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGV
                     YNGRDNLSENSYRIGVSFKL"
     gene            1247..2353
                     /gene="nanM"
                     /locus_tag="RHX79_004458"
     CDS             1247..2353
                     /gene="nanM"
                     /locus_tag="RHX79_004458"
                     /EC_number="5.1.3.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate epimerase"
                     /protein_id="HDV2199546.1"
                     /translation="MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIG
                     LGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSKGLTQ
                     VFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNE
                     AGKDSATIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK
                     GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIF
                     AGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW
                     NNSLLIIGGETAGGKAVTDSVLISVKDNKVTVQN"
     gene            2418..3398
                     /locus_tag="RHX79_004459"
     CDS             2418..3398
                     /locus_tag="RHX79_004459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HDV2199547.1"
                     /translation="MNAIISPDYYYVLTVAGQSNAMAYGEGLPLPDREDAPHPRIKQL
                     ARFAHTHPGGPSCHFNDIIPLTHCPHDVQDMQGYHHPLATNHQTQYGTVGQALHIARK
                     LLPFIPDNAGVLIVPCCRGGSAFTAGSEGTYSERHGASHDACRWGTDTPLYQDLVSRT
                     RAALAKNPQNKFLGVCWMQGEFDLMTSDYASHPQHFNHMVEAFRRDLKQYHSQLNNIT
                     DAPWFCGDTTWYWKENFPHAYEVIYGNYQNNVLANIIFVYFQQQGERGLTNAPDEDPD
                     DLSTGYYGSAYRSPENWTTALRSSHFNTAARRGIISDRFVEAILQFWREK"
     gene            complement(3406..3528)
                     /locus_tag="RHX79_004460"
     CDS             complement(3406..3528)
                     /locus_tag="RHX79_004460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012139841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDV2199548.1"
                     /translation="MISFVFLLPVYPNCHAMLHRRKPPFTPEELKALMDANKSN"
     gene            3610..4482
                     /locus_tag="RHX79_004461"
     CDS             3610..4482
                     /locus_tag="RHX79_004461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004186812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDV2199549.1"
                     /translation="MASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPR
                     LFDYGSEIYEPLHSLLERFGPQRSQYRPDMPFWRLQGDGFWQLHNAELCSTAGSSRQP
                     PVKELNEYHVAGGFDEQHYALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQ
                     QIRKQRDPLFRKNVLRAYNYQCAICGFNMRHDDTTVALEAAHIKWKQQGGPCEIPNGL
                     ALCAIHHKAFDKGSIGLDENMRVLVSDAVNGGGIVEKLFWDFDGKTIALPQVRKNYPF
                     EGFVEWHRKEVFRG"
BASE COUNT         1419 a          986 c         1076 g         1225 t
ORIGIN      
        1 aagatcgaca tattttgtga cacgaattgc aaatctggtt ttgttgtatg gattgcgtga
       61 tttttgatct ggtataacag gtataaaggt gcaccaagat agtcaatgag acagggcatc
      121 tcgcaatcta tggcaaacat cacttcagtt ctttctcatc gggtgatgaa aacgcacttc
      181 agtctgaaag gaatatgaaa atgagatcaa cagacattct attttatgac tctgggtaaa
      241 atggattgag taagtgatat agcttacgaa cattcaaatc aattaaacat cagaagagat
      301 tttatactca ggtatttaat ctggatctct gtttatttaa ataatgtgaa aagagatttt
      361 tcacaggaga ccttatacaa aaaaatataa aatacagcta ccggttgcca aagacactat
      421 aagcctggca aaaaaatatt acacaacata aatgctaatt gcttatgcgg gctttgtatt
      481 gctttctgta tcctacaaat gagtgaaatt tatgaaaaag gctaaaatac tttctggcgt
      541 attattactg tgcttttcgt ccccattaat ttctcaggct gcgacactgg acgtacgtgg
      601 tggatatcgt agtggaagcc acgcctatga gactcgactc aaagtcagtg agggatggca
      661 aaatggatgg tgggcaagca tggaaagtaa tacctggaat accattcatg ataataaaaa
      721 ggaaaatgcc gcactcaatg atgttcaggt tgaagttaat tacgcaatta aacttgatga
      781 tcaatggacg gtgcgcccgg gaatgttaac gcattttagc agcaacggca cacgctacgg
      841 accctacgta aaactgtcct gggacgcgac aaaagatctt aattttggca ttcgctatcg
      901 ttacgactgg aaagcttacc gacaacaaga cttatccggt gatatgtctc gtgataacgt
      961 tcatcgttgg gatggatatg tcacttacca tattaatagt gatttcacct tcgcatggca
     1021 aacgacgcta tacagcaaac agaacgatta tcgctatgca aaccataaga aatgggcgac
     1081 ggaaaatgca tttgttctac aataccatat gacgcccgat attacgccat acatagaata
     1141 tgactacctg gaccgtcagg gtgtttacaa cggcagagat aatttatcgg aaaacagtta
     1201 tcgcattggt gtgtcattta aactgtagta gcaggagaca gtcacaatga ataaaacaat
     1261 aacggcgctt gctatcatga tggcttcatt tgccgcaaac gcgtctgtat tacctgaaac
     1321 tcctgtgcca tttaaaagtg gtaccggagc aattgataac gacactgtct acattggttt
     1381 aggtagcgca ggtacggcat ggtacaagct ggatacacag gccaaagata aaaaatggac
     1441 agcgttagct gcattccctg gtggaccaag agatcaagca acctcggcat ttattgatgg
     1501 caatctgtat gtgtttggcg gcattggcaa aaatagcaag ggcttgactc aggtatttaa
     1561 tgacgtacac aaatacaacc ccaaaaccaa tagttgggtt aaattgatgt cgcatgcacc
     1621 gatgggcatg gcgggccatg tgacttttgt acacaacggc aaggcttatg ttactggcgg
     1681 tgttaaccag aatatcttca atggctattt tgaagatctc aacgaggctg gaaaagattc
     1741 agcaactata gacaagatca atgcccatta ttttgacaaa aaagcagaag attatttctt
     1801 caataagttt ctgttgtctt ttgatccctc aacacagcaa tggagttacg ctggcgaatc
     1861 tccctggtac ggaacggctg gtgcggcggt tgtgaataaa ggtgataaaa cctggcttat
     1921 taatggcgaa gccaaaccag gattgcgaac ggatgccgta tttgaacttg atttcaccgg
     1981 taataattta aaatggaata agcttgctcc cgtctcatca ccagatggcg tcgctggcgg
     2041 ttttgcgggg ataagcaatg attctcttat atttgccgga ggggccggat tcaaaggttc
     2101 acgagaaaat taccagaacg gtaagaacta tgcgcatgaa ggcctaaaaa aatcatatag
     2161 cactgatatt catctttggc ataacgggaa atgggataaa tcgggtgaat tatcgcaagg
     2221 tcgggcctac ggagtatcat tgccctggaa taatagtcta ttgattattg gcggtgaaac
     2281 tgcaggcggc aaagcggtga cggattcagt tttgatctct gtgaaggata ataaagtcac
     2341 agtacaaaat taacgcttca gggccccggt aaaggggccc tgctatcaat ttgtcatttc
     2401 aattacgcga aatttatatg aacgcaataa tatcgcccga ttattactat gttcttaccg
     2461 ttgctggtca gtctaatgcc atggcgtatg gcgaaggact gccattaccg gacagggaag
     2521 atgcgcctca tcccagaatt aaacaattag cgagatttgc gcatacgcat cccggaggcc
     2581 cgtcatgtca ctttaacgac attattccac tgactcactg cccacacgat gttcaggata
     2641 tgcagggtta tcaccatcct ctggcaacga atcatcaaac acagtacggc accgttggcc
     2701 aggcactgca tattgcacgg aaattactac cctttattcc tgataatgca ggggttctca
     2761 tcgttccatg ttgccgtggc ggatcggctt ttaccgcggg cagcgaaggg acatattcag
     2821 aacggcacgg agccagccat gatgcttgtc gttggggaac ggatactccg ctgtaccagg
     2881 atttagtcag cagaacgcga gccgcactgg caaaaaatcc gcagaacaaa ttcctcggcg
     2941 tatgctggat gcaaggcgaa tttgacttaa tgaccagtga ctacgcgtca caccctcaac
     3001 actttaatca tatggttgaa gcctttcgta gggatctaaa acaataccat tctcagctta
     3061 ataatattac tgacgcaccg tggttttgcg gcgataccac ctggtactgg aaagaaaatt
     3121 tccctcatgc gtatgaagtt atttatggca attatcaaaa taatgtttta gccaatatta
     3181 ttttcgtcta cttccagcaa caaggtgaaa gaggactgac gaacgcgcct gatgaagatc
     3241 cggacgattt aagcacggga tattacggtt cagcgtaccg gtcaccggag aactggacga
     3301 cggcactgcg aagcagtcat ttcaacacgg cagcccgtcg ggggattatt tctgacaggt
     3361 ttgtagaagc aattttgcag ttttggcgcg aaaagtgagc gttcattaat ttgatttatt
     3421 cgcatccatc aacgctttta actcctccgg cgtaaaaggt ggtttgcgtc ggtgcaacat
     3481 cgcatggcaa ttagggtaca caggcagcaa aaaaacaaat gagatcaaag taatatatct
     3541 tcacttgcag gcttgaacag ccgaaaattt gcgagcatga tcgcaattat ttcactgcca
     3601 gggatatcaa tggcttccag taaatcgcta cagcaggcaa ttgccaacat aaaaatctgg
     3661 cacaaaggtg aacagcgcgc gccgcataag ccattgttat tgctatacgt attagcggga
     3721 tacctgaatg gacatccacg ccttttcgat tatggctcgg aaatctacga acctctgcac
     3781 agtttactgg aacgttttgg gccacagcgt tcacagtacc gacctgatat gcccttctgg
     3841 cgattacaag gcgacggatt ctggcaatta cacaatgccg agctttgctc aacagcaggg
     3901 agcagccgac aaccgccagt gaaggaactg aacgaatacc acgttgcagg cggtttcgat
     3961 gaacagcact acgccctggt aaccggcaat aaaaaactca tcaatactct ggcgcaacag
     4021 atactcgaag cgcacttcac cgagagtatt caggaagaaa ttgctgacga gctgggtttt
     4081 gatctccagc aaatccgtaa acagcgcgac cctttatttc gcaaaaatgt attacgcgct
     4141 tataactacc agtgcgcgat atgtggcttt aatatgcgcc acgacgacac caccgtagcg
     4201 ttggaagcgg cgcatataaa atggaaacag caaggaggtc cttgtgaaat tcctaatggc
     4261 ctggcgcttt gcgcaattca ccataaagcc tttgataaag gatcgattgg cctggatgaa
     4321 aatatgcggg tactggtatc agatgcggta aacggcggag ggatcgttga gaaactattc
     4381 tgggattttg acgggaaaac tattgcgtta ccacaggtgc gtaaaaatta cccttttgag
     4441 gggtttgtgg agtggcatcg gaaagaggtt tttagggggt gaggttgata ataccgtgcc
     4501 cccataatat tgccatctct tgcattgaga tattacaagc tacaaatgtt ctccccattt
     4561 ttcaatgtag acatttatag caatatcaaa atttattgtt cagctttttc aacaacaaaa
     4621 ccattttgcc gtacaaactc aatcaagagt tcaatattaa caatacccca ttgattagaa
     4681 atagcaacaa tttcaccaga aggaag
//
LOCUS       DAPGWB010000245         4629 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.247, whole genome shotgun sequence.
ACCESSION   DAPGWB010000245 DAPGWB010000000
VERSION     DAPGWB010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4629
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.247"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..406)
                     /locus_tag="RHX79_004462"
     CDS             complement(<1..406)
                     /locus_tag="RHX79_004462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS element protein"
                     /protein_id="HDV2199550.1"
                     /translation="MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVT
                     SGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADI
                     RLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSR"
     gene            635..1243
                     /locus_tag="RHX79_004463"
     CDS             635..1243
                     /locus_tag="RHX79_004463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HDV2199551.1"
                     /translation="MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFN
                     PLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMD
                     AGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC
                     AVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA"
     gene            1341..2732
                     /gene="selA"
                     /locus_tag="RHX79_004464"
     CDS             1341..2732
                     /gene="selA"
                     /locus_tag="RHX79_004464"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDV2199552.1"
                     /translation="MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQML
                     DEAREVIRGSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAE
                     AAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLM
                     LAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNEN
                     TALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEP
                     MPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAAL
                     EATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLS
                     QIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRC
                     LEDEQRFLEMLLK"
     gene            2729..4573
                     /gene="selB"
                     /locus_tag="RHX79_004465"
     CDS             2729..4573
                     /gene="selB"
                     /locus_tag="RHX79_004465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDV2199553.1"
                     /translation="MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAY
                     WPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLT
                     GNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREH
                     LLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRV
                     RALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHT
                     PLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAG
                     ARVVMLNPPRRGKRKPEYLQWLASLARAQSDADALSVHLERGAVNLADFAWARQLNGE
                     GMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMAL
                     PMEDEALVLLLIEKMRESGDILSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGDEPWW
                     VRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGS
                     TCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK"
BASE COUNT         1041 a         1177 c         1359 g         1052 t
ORIGIN      
        1 tgcggctgta accgtcctca ccgggaaaca ggtgctcaaa atacaggctt ctgccgccgt
       61 tatcactgag tatcagtgtg ttatcgcgca gctgtaagcg gatatccgca ggcattttcc
      121 agccggggcc gaggctcccc accggcgcgg gcgtttttgt ccggtaactg ctgtaggtgc
      181 gggagagaat gaacggcagc gggccgggca gggcgatgtc ggtttcaccg ggaaggacct
      241 ttgcaccgag caggggattg accggatggc cggacgtcac tccgccgggg cacaccgaac
      301 aggccacgcc ggtgggggca ccaatgcgca ccccggctga accctgaaca atgctaccgc
      361 catactgcgt catgtcgccc tgacgcgctg ccggttttcc gctcatctgc tcatccttgt
      421 tttatcgggt tatttgtctg cttccaggca aaaccctaca gatttataag aaagccttaa
      481 gtgagatatc catcagatag aaacaattag gaaaatattt atatcaccat gataaatatg
      541 tgatttattt ggaagtaaca aaccatcaac attttctgcc ctttttccca tcaccaggcc
      601 atactgatat ttttcctcgc acaaaggact cggcatgaaa ctcgtcggta gctacaccag
      661 cccgtttgta cgcaaacttt ctattctgtt gttagaaaag ggcataactt tcgaatttat
      721 taatgaactg ccctataacg cggacaacgg cgtggcgcaa tttaacccgt taggaaaagt
      781 gccggtgctg gtgaccgaag agggcgaatg ttggtttgat tcgccgatca tcgctgaata
      841 tattgaatta atgaatgtcg ctccggcgat gttgccgcgc gatccgctgg agtcgttgcg
      901 ggtgcgcaaa attgaggcac tggcggatgg cattatggat gccgggctgg tatcggtgcg
      961 tgaacaggcg cgtccagcgg cgcagcagtc tgaagatgaa ttgttacgcc agcgggagaa
     1021 aatcaaccgc agtctggatg tgctggaagg atatctggtc gatggcacac tcaaaaccga
     1081 tacggtcaat ctggcgacta tcgccattgc ctgtgccgtc ggatatctca atttccgccg
     1141 cgttgcgcca ggttggtgtg tcgaccgccc acacttagtc aaactggtcg aaaacctgtt
     1201 tagccgcgaa agttttgctc gcaccgaacc gccaaaggct tgatgcgcga tatgtcctcc
     1261 tgacctatct cacgttacaa tccgtggtta tgttaaacgc ccttctccgt gtgagagggc
     1321 cttgatcagc caggtttcct atgacaaccg aaacgcgttc cctctatagt caacttccgg
     1381 ctattgatcg cttattgcgc gatagctcct tcctttcttt gcgtgatact tatggtcaca
     1441 cccgcgtggt ggaattgttg cgtcagatgc tcgacgaagc gcgagaagtg attcgtggca
     1501 gccagacgct gcctgcgtgg tgtgaaaact gggcgcaaga agtcgatgcc cggttgacga
     1561 aagaagcgca gagcgcgctg cgtccggtga tcaacctgac gggaaccgtg ctgcatacca
     1621 accttggacg agctttacag gcggaagccg cggtggaagc cgttgcgcag gctatgcgtt
     1681 cgccagtgac cctcgagtac gatctggacg acgccggacg cggacatcgc gatcgggcgc
     1741 tggcgcaact gctgtgccgt attacggggg cggaagatgc ctgtatcgtc aataacaatg
     1801 cggcggcggt gttattgatg ttggcggcca ctgccagcgg gaaagaggtg gtagtatctc
     1861 gcggcgaatt ggtggagatt ggcggcgcgt ttcgtattcc cgatgttatg cgtcaggcag
     1921 gttgcaccct acacgaagta gggaccacca accgcacgca cgcgaatgat tatcgtcagg
     1981 cggtgaatga aaataccgca ctgttgatga aagtacatac cagtaactac agcattcagg
     2041 ggttcaccaa agcgatagat gaagcggaac tggtggcgct cggcaaagag ctggatgttc
     2101 ccgtagtgac tgatttaggc agtggctcgc tggtcgatct tagccagtac ggtttgccga
     2161 aagagccaat gccgcaggag ttgattgcgg cgggcgtcag tctggtgagt ttctccggcg
     2221 acaagttgtt aggcgggccg caggcaggaa ttattgttgg taaaaaagag atgatcgccc
     2281 gcctgcaaag ccacccgctg aagcgtgcat tacgcgcgga taaaatgacc ctcgcggcgc
     2341 tggaagccac gttgcgtctt tatttacacc ctgaagctct gagtgaaaaa ttaccgaccc
     2401 tgcgcctgct tacccgcagc gcagaggtca ttcaaatcca ggcacaacgt ttacaggctc
     2461 cccttgccgc acattacggc gcggagtttg cggtacaggt tatgccatgt ctttcgcaga
     2521 ttggcagtgg ttcgctgccg gttgatcgcc tgccgagcgc ggcattaacg tttacacccc
     2581 atgatggacg cggtagccac cttgagtcat tagccgcccg ctggcgtgaa ttgccagtgc
     2641 cggtgattgg tcgtatttat gacggacgat tgtggctgga tttacgctgc cttgaagatg
     2701 agcaacggtt tttggagatg ttgttgaaat gattattgcg actgccggac acgttgacca
     2761 cggcaaaaca accttattgc aggcgattac tggcgtaaat gctgaccgtc tgccggaaga
     2821 aaaaaagcgc ggcatgacca tcgatctcgg ctatgcctac tggccgcagc cggatggtcg
     2881 cgtgcctggt tttatcgacg tacccggtca tgaaaagttt ctttccaaca tgctggcggg
     2941 cgttggtggt atcgatcacg cgctgttggt ggtggcgtgc gatgacggcg tgatggcgca
     3001 gacccgtgag catctggcga ttttgcagct gaccggtaac ccgatgctga cagtggcgct
     3061 gaccaaggcc gatcgcgtgg acgaagcgcg tgttgatgag gttgaacgcc aggtaaagga
     3121 ggtgctgcgg gaatacggtt ttgctgaggc aaaactgttt atcaccgcag caaccgaagg
     3181 tcggggaatt gatgccctgc gcgagcatct gcttcagttg ccggaacgcg agcacgccag
     3241 ccaacatagt ttccgcctcg ctattgaccg cgcatttacc gtaaaaggtg ccgggctggt
     3301 cgtcaccggt acggcgttaa gcggggaagt gaaggtaggc gattcactct ggctgactgg
     3361 tgtaaataaa ccgatgcgtg tacgtgcgct gcatgcgcaa aaccagccaa cagaaaccgc
     3421 caatgccggg cagcgtatcg cgcttaacat cgcgggtgat gcggaaaaag agcagattaa
     3481 ccgtggcgac tggctgcttg ccgatgtgcc gccagagccg ttcacacggg tgattgtcga
     3541 gcttcaaacc catacaccgc tgacccagtg gcagccgctg catattcacc acgccgccag
     3601 ccacgtcacg ggacgcgttt cactgctgga agataacctt gccgagctgg tgttcgacac
     3661 gccgctgtgg ctggcggata acgatcgctt agtgctgcgc gatatctcgg cccgcaacac
     3721 gctggcgggg gcgcgtgtgg tgatgcttaa cccgccgcgt cgcggtaaac gtaagccgga
     3781 atatctgcaa tggctggcgt ctcttgcacg ggcgcagagc gatgccgatg cgttatctgt
     3841 tcatctggaa cgcggcgcgg ttaaccttgc ggatttcgcc tgggcgcgcc agctcaacgg
     3901 cgaagggatg cgcgaattgc tgcaacagcc tggctatatt caggctggtt atagcttgtt
     3961 gaatgcgccg gttgccgctc gctggcaacg gaaaattctc gacacattag cgacttatca
     4021 tgagcaacat cgcgatgaac ctgggcctgg gcgcgaacgt ctgcgacgta tggcgttgcc
     4081 aatggaagat gaagcgctag tactgttgct gattgaaaag atgcgcgaaa gcggcgacat
     4141 cctcagtcat cacggttggc tgcatctgcc ggatcacaaa gcgggcttca gcgaagagca
     4201 gcaggccatc tggcaaaaag cagagccgct gtttggtgac gagccgtggt gggtgcgtga
     4261 tctggcaaaa gagacgggta ccgacgagca ggcaatgcgc ctgacgctac gccaggcggc
     4321 gcagcaagga ataattaccg cgatcgtcaa agatcgttat taccgtaacg atcggattgt
     4381 cgaatttgcc aatatgatcc gcgatctcga tcaggagtgt ggttcaacct gcgcggcgga
     4441 tttccgcgat cgcttaggcg taggccgaaa gctggcaatt cagattctgg aatattttga
     4501 ccgcattggc tttacgcgtc gtcgtggaaa tgatcattta ttgcgcgacg cattattatt
     4561 tccggaaaaa taaggaaatg attaattaat ttttaaaata aattaataca aatttcttat
     4621 gattttaaa
//
LOCUS       DAPGWB010000246         4553 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.248, whole genome shotgun sequence.
ACCESSION   DAPGWB010000246 DAPGWB010000000
VERSION     DAPGWB010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4553
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.248"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            105..>4553
                     /gene="traI"
                     /locus_tag="RHX79_004466"
     CDS             105..>4553
                     /gene="traI"
                     /locus_tag="RHX79_004466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer relaxase/helicase TraI"
                     /protein_id="HDV2199554.1"
                     /translation="MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQ
                     GSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRL
                     IDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHA
                     VVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV
                     GKHGMWEMPGVPVEAFSGRSQAIREAVGEDASLKSRDVAALDTRKSKQHVDPEVRMAE
                     WMQTLKETGFDIRAYRDAADQRAETRTQAPGAVSQEGPDVQQAVTQAIAGLSERKVQF
                     TYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSV
                     RALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA
                     ELVMMAREQGREVQIIAADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVD
                     QGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQR
                     PATIISEPDRNVRYARLAGDFAVSVKAGEESVAQVSGVREQAILTQAIRSELKTQGVL
                     GHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLT
                     LRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV
                     SEDAMTVVVPGRAEPATLPVADSPFTALKLENGWVETPGHSVSDSAKVFASVTQMAMD
                     NATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGETSLETAISHQ
                     KSALHTPAQQAIHLALPVVESKNLAFSHVDLLTEAKSFAAEGTSFTELGREIDAQIKR
                     GDLLHVDVAKGYGTDLLVSRASYEAEKSILRHILEGKEAVTPLMERVPGELMEKLTSG
                     QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV
                     GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA
                     AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINR
                     DVERALSGLESVKPSQVPRLEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV
                     PMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDALEKAGELGKEQVMVP
                     VLNTANIRDGELRRLSTWETHRDALALVDNVYHRIAGISKDDGLITLEDAEGNTRLIS
                     PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQ
                     QTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKQMAGFESAYVAL
                     SRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAER"
BASE COUNT         1028 a         1171 c         1532 g          822 t
ORIGIN      
        1 gaaaatcatc cggacatcca gcagcagatg cagcgtcgtg aagaggtgaa cattaatgtg
       61 caccgggagc gcggggagga tgttgagccg ggagatgatt tctgatgatg agtatcgcgc
      121 aggtcagatc ggccggcagt gccgggaact attataccga caaggataat tactatgtgc
      181 tgggcagcat gggagaacgc tgggccggca ggggggctga acagctggga ctgcagggca
      241 gtgtcgataa ggatgttttt acccgtcttc tggagggaag gctgccggac ggagcggatc
      301 taagccgcat gcaggatggc agtaacaggc atcgtcccgg ctacgacctg accttctccg
      361 cccccaaaag tgtctccatg atggccatgt taggtggcga taagcgcctg attgatgcac
      421 ataaccaggc cgtggacttt gctgttcgtc aggtggaggc gctggcctcc acacgggtga
      481 tgacggacgg acagtcagaa acggtgctga ccggtaatct ggtgatggca ctgtttaacc
      541 acgacaccag tcgcgatcag gaaccacagt tacacacgca tgcggtggtg gctaatgtca
      601 cgcagcataa cggcgaatgg aagacactga gcagtgacaa agtggggaaa acggggttca
      661 ttgagaatgt gtacgctaat cagattgcct ttggcaggct ctaccgggaa aaactgaaag
      721 agcaggttga ggcgctgggc tatgaaaccg aagtggtggg taagcacggt atgtgggaaa
      781 tgccgggcgt accggtggag gccttttccg gacgctcaca ggcaatccgg gaggccgtcg
      841 gggaagatgc ctcgctgaaa tcccgggatg tggcggcact ggatacgcga aaatccaaac
      901 agcacgtcga tcctgaagtc agaatggctg aatggatgca gacgctgaag gaaaccgggt
      961 tcgacatccg ggcatatcgt gacgcggcgg atcagcgtgc ggagacccgc acgcaggcgc
     1021 ccggggctgt ttcacaggag gggccggatg tgcagcaggc ggtgacacag gccattgccg
     1081 gattaagtga acgaaaagtg cagtttacgt acacggacgt gctggccaga acggtcggca
     1141 tactgccgcc ggaaaatggt gtgattgaac gggcacgcgc cggtatcgat gaggccatca
     1201 gccgtgagca gcttatcccc ctcgatcgtg agaaggggct gttcacgtcc gggattcatg
     1261 tgctcgatga gctgtcagtc cgggcactca gtcgtgacat catgaaacag aaccgggtga
     1321 ccgtacatcc ggagaaaagt gtcccccgga cggctggtta cagcgatgcg gtcagtgttc
     1381 tggcacagga ccgtccgtcg ctggccattg tgtccgggca gggcggtgca gccgggcagc
     1441 gtgagcgggt ggctgaactg gtcatgatgg cccgggagca ggggcgggag gtgcagatta
     1501 tcgctgctga ccgtcgctcg cagatgaacc tgaagcagga tgaacggttg tccggtgagc
     1561 tgataaccgg acgtcgtcag ctgctggaag gcatggcctt cacgccgggc agtactgtta
     1621 tcgttgacca gggcgaaaaa ctctccctga aagagacgtt aaccctgctg gacggtgctg
     1681 cacgtcataa cgtacaggtc ctgataaccg acagcgggca gcgaaccggt acaggcagtg
     1741 cactgatggc catgaaggat gccggggtga acacatatcg ctggcagggg ggagaacagc
     1801 gaccggccac catcatcagt gaaccggacc gtaatgtccg ctatgcccgg ctggcaggag
     1861 attttgcggt cagcgtgaaa gccggagaag agagcgtggc acaggtcagc ggggtacggg
     1921 aacaggccat actgacacag gccattcgca gtgagctgaa aacacagggc gtgctcggac
     1981 acccggaggt aaccatgacc gccctgtcac cggtctggct ggacagccgg agccgttatc
     2041 tgcgggatat gtaccgtccg gggatggtga tggagcagtg gaacccggag acacgcagtc
     2101 atgaccgcta tgttatcgac cgggtgacgg cgcagagtca cagcctgacc ctgcgggatg
     2161 cgcagggtga aacgcaggtg gtgcgtattt cctccctgga cagcagctgg tcgctgttcc
     2221 ggccggaaaa aatgccggtg gcagacggcg agcgactgag ggtgacaggg aaaattcccg
     2281 gactccgcgt ctccggcggt gaccgcctgc aggtggcatc cgtcagtgaa gatgcgatga
     2341 cggttgttgt gccggggcgg gctgaaccgg ccaccctgcc tgtggctgat tcaccgttca
     2401 cggcactgaa gctggagaac ggctgggtgg aaacgcccgg gcattccgtc agcgacagtg
     2461 cgaaggtttt tgcctccgtc acacagatgg caatggacaa cgccaccctg aacggtctgg
     2521 cccgcagcgg tcgtgatgtc cggctgtatt cctcactgga tgaaacccgt actgcggaaa
     2581 aacttgcccg ccatccctcc tttacggtgg tttctgagca gataaaggcg cgtgccggtg
     2641 agacatcgct ggaaacggct atcagtcatc agaagtccgc acttcacacg ccggcacagc
     2701 aggccattca tctggccctt ccggtggtgg aaagtaaaaa cctggccttc agccatgtgg
     2761 acctgctgac agaggcaaag tcgtttgctg cagaaggaac cagttttact gaactggggc
     2821 gggaaatcga tgcgcagata aaacggggtg atttactgca tgtggatgtg gctaaaggct
     2881 atggcacaga cctgctggtt tcccgtgcgt cgtatgaggc agaaaagagc attcttcgcc
     2941 atattctcga gggtaaggag gcggtcacgc cgctgatgga gagagtacct ggcgaactca
     3001 tggagaaact gacatcagga cagcgtgccg ccacccgcat gatactggaa acgtccgacc
     3061 gtttcacggt ggtgcagggg tatgccgggg tgggtaagac cacacagttc cgggcggtga
     3121 tgtcagccgt gaacatgctg ccggagagtg agcgtccccg tgtcgttggg ctggggccca
     3181 cgcaccgtgc ggtcggggag atgcgcagcg caggcgtgga tgcacagaca ctggcgtcct
     3241 ttctgcatga cacgcagctg cagcagcgca gcggagaaac gccggatttc agcaacacgc
     3301 tgttcctgct cgatgagagc tcaatggtgg gcaataccga catggcacgg gcatacgccc
     3361 tgattgcggc cggtggtggt cgtgccgtgg ccagcggtga cacggaccag ctgcaggcca
     3421 tcgcgcccgg tcagcctttc cgtctccagc agacgcgcag tgctgccgat gtggtcatca
     3481 tgaaggagat tgtgcgtcag acgccggaac tgcgggaggc ggtatacagc ctgattaacc
     3541 gggatgtgga aagggcactg tccgggcttg agagtgtgaa accgtctcag gtgccacgtc
     3601 tggagggcgc atgggcaccg gagcactccg tgacggagtt cagtcacagc caggaagcga
     3661 aactggcaga agcgcagcag aaagcgatgc tgaaaggcga ggcttttccg gatgtcccca
     3721 tgacactgta tgaagccatt gtccgcgact ataccggcag gacaccggaa gcacgggagc
     3781 agacgctgat tgttacgcac ctgaatgagg accggcgcgt gctgaacagc atgattcatg
     3841 atgcactgga aaaggccggt gagctgggaa aagagcaggt catggtgcct gtcctgaaca
     3901 cagcgaatat acgcgacggg gagttgcgtc gtctctccac ctgggagaca catcgggacg
     3961 cacttgccct ggtggataat gtgtatcacc ggattgccgg tatcagtaag gatgacgggc
     4021 tgataacctt ggaggatgcg gaaggtaaca cgcggctgat ttcgccccgg gaggcggtgg
     4081 ctgaaggcgt cacactatac actccggaca ccatccgggt gggaaccggt gaccggatgc
     4141 gcttcacgaa gagtgaccgg gagcgcggtt atgtggccaa cagcgtctgg acggtgacag
     4201 cggtttccgg tgacagtgtc acgctgtcgg acggacagca gacccgggag attcgccccg
     4261 gccaggagca ggcagagcaa catattgacc tggcctatgc catcaccgct cacggtgcgc
     4321 agggggcaag tgaaaccttt gccattgcgc ttgaaggcac ggaaggtaac cggaaacaga
     4381 tggccggctt tgagtcagcc tatgtggccc tgtcgcgtat gaagcagcat gtgcaggtgt
     4441 acaccgataa ccgtcagggc tggacggatg ccatcaacaa tgccgtacag aaaggaactg
     4501 cccacgatgt gtttgagccg aaaccggacc gggaggtcat gaatgcagag cgg
//
LOCUS       DAPGWB010000247         4539 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.249, whole genome shotgun sequence.
ACCESSION   DAPGWB010000247 DAPGWB010000000
VERSION     DAPGWB010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4539
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.249"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..171)
                     /locus_tag="RHX79_004467"
     CDS             complement(<1..171)
                     /locus_tag="RHX79_004467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV2199555.1"
                     /translation="MKKRNFSAGFKRESAQLVVDQNYTVADAAKAMDVGLSTMTRWVK
                     QLRDERQGKTPKA"
     gene            245..1789
                     /locus_tag="RHX79_004468"
                     /pseudo
     CDS             245..1789
                     /locus_tag="RHX79_004468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001710491.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KAP family P-loop domain protein"
     gene            1789..2541
                     /locus_tag="RHX79_004469"
     CDS             1789..2541
                     /locus_tag="RHX79_004469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199556.1"
                     /translation="MGTSQSSKGPGGGSPLVPPWADDQPQQPLPSPQERRFAPFRESL
                     GNAVSNGNRADFRKAIGHYARKASGGSSNAARRLGSVTQAGAELFGALVGMPSAPGEP
                     SIDLGSLAGLPCEIAISTIAQALTSQDGDSEKICAAMNHALVEALDGVEIFDPQKITD
                     GVIVDTMIGYLAESIFLQMVMDSNRAWNKADTPSKAIHAEIELRELIKVVVDKHMAPK
                     LAGNIRSFTRNQMVKIERQAIIEAWQEWEAYQ"
     gene            2523..3842
                     /locus_tag="RHX79_004470"
     CDS             2523..3842
                     /locus_tag="RHX79_004470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011076665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDV2199557.1"
                     /translation="MGGIPVTQLVFHHKHHHLPPASEKVLPVQLYGLSGQRRGDISVI
                     GNPAIDRIRRLGVQLPAKVMDFLSVALAVTAADTFVQRESSEDGWTRQLSLRLPLHEP
                     SRWISLKKELESALHFLSGDIWDFEFCDDGYAPPEPYSQHSRHRLIKLKGLDCVSLFS
                     GGLDSAIGAIDLLAAGRAPLLVSHAYKGDKSRQDQIAEKLSGQFSRFEINADPHIYQG
                     VTDITMRTRSLNFLAFAAVGACAVQEISQQEKIDLFVPENGFISLNAPLTPRRIGSLS
                     TRTTHPHFITSIQKIFDALGISCQIINPYQFKTKGKMISECSNKQLLSKIVESTVSCS
                     HWKRMGQQCGVCIPCIIRRASLHAGGISRDVEYIFQSLAKVMNEIDRRDDLIALRIAI
                     TQKSTLKIGTWIAKSGPLPTAEFDNFKQVFKDGLDEVESYLLSENIV"
     gene            3839..>4539
                     /locus_tag="RHX79_004471"
     CDS             3839..>4539
                     /locus_tag="RHX79_004471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDV2199558.1"
                     /translation="MSIDMHCHLDLYPRPDLVAEESKRRGTYILSVTTTPKAWHGTSL
                     LAKESQRIRTALGLHPQIAHQRSHELDLFDSLLSETKYVGEIGLDGGQGFKEHWDIQL
                     KVFRHILNSVNRAGGKIMTIHSRGSASAVLDEIENIDGVAILHWFTGTPKQLERAIDL
                     GCWFSVGPAMLDTIKGKALVLKIPKSRILTETDGPFAKFRNDPLMPWDSGIAEKQLAA
                     LWGISQMEVNAQLVD"
BASE COUNT         1296 a          910 c         1102 g         1231 t
ORIGIN      
        1 ggcttttggt gttttgccct gacgctcatc acgcagttgt ttgacccatc ttgtcattgt
       61 ggaaaggcca acatccatag ctttggcggc atctgccacc gtgtagttct ggtcaacaac
      121 cagttgagcg gattcgcgtt taaaccctgc gctgaaattt ctttttttca ttggagcacc
      181 tgtgttgttc tgaggtgagc atatcacctc tgttcaggtg gccaaattca gtgtgccact
      241 tcatgccgca cttcttgaag tcatcgctac agaattgaca aaagctgctg aaggtaattc
      301 tacccttata tcaaaaacta agagactcct tagtcgagtt gatggtttta gagctatggg
      361 attactagct gagggtacag ctttaatggc aggattacct actggcggtt tgctttctag
      421 ggggattggt gcattaagaa atatcaccga tggcatccag agccaggaag agtatgaggc
      481 tttaggcaat atagctaaag aaggtaaaga aactgcttgt ggtttgatta aaccacaaac
      541 aaaaaaaagc ccccctcagc agattgatgc ctttcgtaag gaatatgggg aaattctaga
      601 agaacttgga aagccactca ttgtggtaat agataaccta gaccgctgtc tccctgccaa
      661 tgctatccat acacttgaag ctatcaggct attccttttc ttgactaata cagcctttat
      721 tattgcagca gatgaggaca tgattcgctc ttctgtggct gattacttca aaggggcatc
      781 acagcgccat caaatagatt atctggataa gctaatccag gttcctattc gggtgcctaa
      841 ggctggggtc cgtgagatcc gttcgtatct gttcatgctt tatgccattg aacatggctt
      901 agaaggcgaa aaaataacta tgctccgtga gggcttagag aaggcgttac agcaatcctg
      961 gaaagatgaa ccaatctcac gtcaggaggc cttaaaaatg actggtgaag cggatgatag
     1021 caacctcgcg ctggcgtttg cgcgtgctga ccgtattgct cccattttag ccaactctcc
     1081 aattattcat ggtaatccca ggatcgttaa acgcttgttg aatgttgtga aaatgcgatc
     1141 tcaaattgcg aagcgacgag caatgccttt ggatgaagca attattacta agctagtaat
     1201 ttttgaacgc tgtgttggag tggatggcac cgctgattta tatcatctcg tggatattga
     1261 acaaggtgtt ccccagatac ttaaacagct tgacgataat ggcggtcaaa tacctactga
     1321 tgcaccaaag acatggactg atagtccaac gactaaatct ttcatcagtc aatgggccca
     1381 acttgaacct cgtcttggtg ggattgactt aagggccgcc atatatctgt cccgagaaac
     1441 tatgccaata ggtgcatatg tggttggttt atcgccatct ggacgggaag tactaaatgc
     1501 actaattgaa ttgaaaaaca ctagttctcc tacagcagaa aaccttttga aagcacttcc
     1561 tcgtgaggag caaatacctg taatggaagg tttaattaac cagttacggc aggtatcaga
     1621 ttgggatcgt aagcccagag gcttttccgg cgcatgtctg ttggcccgct actcaacaga
     1681 tgcagccagc atattaattc gttatctaca ggaattacag ttggggatga aacgaccagc
     1741 gtggatgact gcagcattaa aagatgaaca atggaataag gacgcttaat gggaacatca
     1801 caatcaagta aaggtccagg aggtggctct ccgctggttc caccatgggc tgatgatcag
     1861 ccacagcaac cgttaccctc gccgcaagaa aggaggtttg cgccatttcg agaatcgttg
     1921 ggaaatgcgg tatcaaatgg aaatcgagca gatttcagaa aagccatagg gcactacgcg
     1981 cgaaaagcct ccggagggag cagtaacgct gctcggcgat tagggagtgt cacgcaagct
     2041 ggggccgaat tatttggggc tttagtggga atgccttcgg ctcccggaga accaagcatc
     2101 gatttgggca gtttggcagg ccttccatgc gaaatagcaa tatcaactat tgctcaagct
     2161 ttaacatcac aggatggtga ctcagaaaag atctgtgcgg ccatgaacca tgctttagtg
     2221 gaggctcttg atggcgtaga aattttcgat cctcaaaaaa taactgatgg tgtgattgtt
     2281 gacacaatga ttggttatct agcggaaagt attttccttc agatggtaat ggattctaat
     2341 agggcatgga acaaagcaga tacaccttca aaggcaattc atgcagaaat tgaactccgg
     2401 gaattgatta aagttgttgt tgataaacat atggcaccaa aacttgccgg taacataaga
     2461 tcgttcacac gaaaccaaat ggtaaaaatt gaacgtcagg ccattattga ggcctggcaa
     2521 gaatgggagg cataccagtg acacaattag ttttccatca taaacatcac catttgccgc
     2581 cagcaagtga gaaagtgtta cctgttcagc tatatggatt aagtggtcag aggcgcggag
     2641 atatatctgt tatcgggaat cctgcgattg atcggatcag acgtttggga gtacagcttc
     2701 cagctaaggt catggatttt ctgagtgttg cattagcagt aactgcagca gatactttcg
     2761 ttcagcgtga aagttccgag gatggttgga cccgccaatt gtcgttacga ctcccccttc
     2821 atgaaccatc cagatggatt agtctaaaga aagaacttga gagtgctttg cattttctta
     2881 gtggagacat ctgggatttc gaattttgtg acgatggtta tgcaccgcca gagccttata
     2941 gccagcattc aaggcatcgt ctgattaagc taaaagggct tgactgtgtc agcttatttt
     3001 caggaggtct ggattcagct attggtgcaa tagatcttct ggctgcaggg cgcgctccac
     3061 ttttggttag tcatgcttat aagggggata agtctcgtca agatcagatt gctgaaaaat
     3121 taagtggcca attttcgcgc tttgagatta atgctgaccc acacatttat caaggcgtga
     3181 ctgatattac gatgcgaact cgtagcctca attttcttgc ctttgcggcc gtaggtgctt
     3241 gtgccgtaca agagatatct caacaagaaa agattgattt gttcgtacct gaaaatggat
     3301 ttatctcatt aaatgcacca cttactccac ggcggatagg ttcgctgagc acacgaacaa
     3361 cacatccaca ttttattacg agcatacaaa agatctttga tgcgctcggt atttcttgtc
     3421 aaataatcaa tccatatcag tttaagacaa aaggaaaaat gatctccgaa tgttcaaata
     3481 agcagctctt atctaaaatt gtggaaagta cagtatcctg cagtcattgg aaacgaatgg
     3541 ggcagcaatg tggggtatgt ataccgtgta tcattcgacg agcatcactt catgcagggg
     3601 gaattagtag agatgttgaa tatattttcc agtccttagc taaagtaatg aatgaaatag
     3661 atcgcaggga cgacctgatc gcccttagga ttgcgatcac gcagaaatcg actttgaaaa
     3721 taggtacatg gattgccaaa agtggccctt tgcctacggc agaatttgat aatttcaagc
     3781 aagtatttaa ggatggcctg gatgaggttg aaagctattt actgagtgag aacatagtat
     3841 gagcatcgat atgcactgtc atctcgactt atatcctcgg ccagacctcg tggctgaaga
     3901 aagtaaacgt cgagggactt atattctgtc ggtgacaaca acacctaaag catggcatgg
     3961 tacttcttta ttggctaaag aaagtcaacg aatccgaact gctcttgggc tacatcctca
     4021 aatcgcgcat caaagatcgc atgagttaga cctgtttgat tcattgcttt cggaaactaa
     4081 gtatgtaggg gaaatagggc ttgatggtgg acagggattt aaagaacatt gggatattca
     4141 attgaaagtg ttccgacaca ttctcaacag tgtaaatcgg gctggtggca agattatgac
     4201 tatccatagt cggggaagtg catcagcggt gcttgatgag attgaaaata tcgatggggt
     4261 ggcaatattg cattggttca ctggaacacc taagcagctt gaaagggcaa ttgatttagg
     4321 atgctggttc tcagtggggc ctgctatgct cgatacaata aagggtaagg ccttagtttt
     4381 gaaaataccc aaatcacgca ttcttacaga aacagatggg ccatttgcta agtttcgtaa
     4441 tgacccacta atgccatggg atagtgggat tgcagagaaa cagttagccg cattatgggg
     4501 gattagtcag atggaggtta atgctcagct agttgataa
//
LOCUS       DAPGWB010000248         4531 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.250, whole genome shotgun sequence.
ACCESSION   DAPGWB010000248 DAPGWB010000000
VERSION     DAPGWB010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4531)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4531)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4531
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.250"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..186)
                     /locus_tag="RHX79_004472"
     CDS             complement(<1..186)
                     /locus_tag="RHX79_004472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2542 family protein"
                     /protein_id="HDV2199559.1"
                     /translation="MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVY
                     VWRAKNPGLFFAYMVAYI"
     gene            complement(189..908)
                     /gene="sanA"
                     /locus_tag="RHX79_004473"
     CDS             complement(189..908)
                     /gene="sanA"
                     /locus_tag="RHX79_004473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane permeability protein SanA"
                     /protein_id="HDV2199560.1"
                     /translation="MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY
                     RQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTM
                     RKDLIAAGVDPTDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
                     GIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPED
                     AQGYPAVTPEQLLELQKKQGK"
     gene            complement(1058..1942)
                     /gene="cdd"
                     /locus_tag="RHX79_004474"
     CDS             complement(1058..1942)
                     /gene="cdd"
                     /locus_tag="RHX79_004474"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HDV2199561.1"
                     /translation="MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSA
                     TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVH
                     AEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY
                     LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECK
                     DGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDAT
                     SATLKALGCHSIDRVLLA"
     gene            complement(2072..2767)
                     /locus_tag="RHX79_004475"
     CDS             complement(2072..2767)
                     /locus_tag="RHX79_004475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidB/LrgB family autolysis modulator"
                     /protein_id="HDV2199562.1"
                     /translation="MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPF
                     LMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVA
                     MVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV
                     FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLI
                     APFLFPIILAVMG"
     gene            complement(2764..3162)
                     /locus_tag="RHX79_004476"
     CDS             complement(2764..3162)
                     /locus_tag="RHX79_004476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HDV2199563.1"
                     /translation="MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGML
                     ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAV
                     STLVVFLVVSWSSQLVHGERKVVGQKGSEE"
     gene            3401..4348
                     /gene="dusC"
                     /locus_tag="RHX79_004477"
     CDS             3401..4348
                     /gene="dusC"
                     /locus_tag="RHX79_004477"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
                     /protein_id="HDV2199564.1"
                     /translation="MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVK
                     VFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKT
                     VNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQA
                     GATELVVHGRTKEQGYRAEHIDWQAIGEIRQRLNIPVIANGEIWDWQSAQQCIAISGC
                     DAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQW
                     LSYLRKEYDEATGLFQHVRVLNNSPDIARAIQAIDIEKL"
BASE COUNT         1189 a         1155 c         1182 g         1005 t
ORIGIN      
        1 gatatatgcc accatataag cgaaaaagag tccgggattt tttgctcgcc agacatacac
       61 cggttccggt gcatttttaa cccgtttatc aatcgcgcct gcgcgccagc ctttccatgc
      121 ttcgcggaaa caaaatatcg gaataaggaa aaaaacggca acgacaaaaa actgctgtac
      181 atccataact actttccttg tttcttttgt aattcaagta actgttcggg tgtgacggcg
      241 ggatacccct gcgcatcttc cggcacctgg tgcatagccg gaatagggac cagcggccct
      301 aaaaaacgcg gttcacgttt aaaaatataa aggtcagcca gcgcaccgaa acgggcggca
      361 aattcgcgaa tacgtactga cagcatatct ttcggtgacg gtacggcata acactgagcc
      421 tgaatcccca tatgcagcgc aataaataat gcccgctcac agtggaaacg ttgggtgata
      481 ataatgaaat cattagtatc gaaaactttg cgtgtacgca cgatggaatc cagcgtacga
      541 aagcctgcgt aatcgagaac aatatctgtt gggtcgacac cagcagcgat taaatctttg
      601 cgcatggtca tcggctcatt ataactttgc aatgcgttat cgccgctcag taatagataa
      661 tttaccttac cgctgttata ggcattaatc gctccttgaa tgcggtagcg ataatactga
      721 ttaattacgc cagtacgata atattttgct gttccgagca ccacaccgac ctggcggtag
      781 gggagatcct gcaattcgtc gtagatataa ggcgcggttt tccagctcat ccagcgatcg
      841 aggccgagca cagtcaacag cagcaagccg atcaggacta acaggctgag gaacacgcgc
      901 tttaacatgc aggagactcg atctaaggaa aatttccatc aggctacttt acccgctggt
      961 tttgcgcaag aaacggcaaa ctgtttgccg ggaatttcga caccaggaga gggctggcaa
     1021 gccggacaag gcgttcacgc cgcatccggc accaggctta agcgagaagc actcggtcga
     1081 tactgtgaca gccgagagct ttcagcgttg cggaggtggc atcccactga atcaacggcg
     1141 catcggcttt ttctgccaga accgcgcgct ggatatccgg gtaatcataa cccttgagat
     1201 tcaacagaat taacgctccc tgcaacggtg gcagagtcgg gttgaatgcg gcgttttcag
     1261 cgtagctgcc actgaaaata cgaccgtctt tacattccag cgcgacaccg cttggcgact
     1321 tactgtaagg catgtgcgaa cggtttgccg ctgcaatcgc cgcctgagaa agcgcatcac
     1381 cagtcagcgc atagccgtga tcctgctcgt ccatcagcag cgttttaatc tccagatctt
     1441 tcggcccaaa ggcatccggc agatagtcac gcagcgcgtg tgcctcgcgg cccggcagat
     1501 gaatacgcag atccagaccg ctgttcagtt cattcataaa ctgacggcag tgaccacaag
     1561 gcgtgtagtt aacggtgatg gctgcaagcg ctttttcacc actcaaccag gcgtggctga
     1621 tcgcgctttg ttcggcatga acggtttgct gcattgtcgc accaataaat tccatattgg
     1681 caccgaaata ccaggttccg ctcacaccgc gcgcaattgc gccaacatta aaattcgaca
     1741 atggcgtacg cgcacaggcc gccgccagcg gaagtagtgc gaatgccagc gcgtcttcgt
     1801 ccagccccgt tgcgctcttc agcgatgaga cttgctcccc ggtcaacaaa gcggggaagt
     1861 acttgtctgc cagaataggt tccagtgcag attgcaagtt atccgcaagt tgggcaaaag
     1921 cggtttgaaa acgtggatgc atggcgttgc ctcataatca tgtaatggga taacagttta
     1981 cgaacccgtt atggctttat atgtgatctg aatctcatta attatgcaac gcgtgaaact
     2041 tacatcaaaa atgcgcgacg catcgcaaat tttagcccat tactgccaga ataatcggga
     2101 aaaggaacgg tgcgatcagc gaagtaatta tcccgcataa caccagcgct agcgaactaa
     2161 atgcaccttc ctgataatcc agctcggcgc agcgcgccgt accgagggcg tgcgaggcag
     2221 tccccattgc cagaccgcgc gcagctttgg tacgaatacg catcgcatta agcaatgtat
     2281 ggccaaatac cgcgccgagg atgccgacga aaatcacgca aactgcgctg attgccggaa
     2341 taccgccaat actgccgcca accgccattg caataggcgt ggtgactgat ttcggcagga
     2401 ttgacgcggc gatttccggt gaagcgccca tcaacaatgc cacggaagtc cccgtcacca
     2461 tcgcaaccac gctgccgata aaacagatgg tgatgatcga tttccagcgc gcgcggatct
     2521 ggtgtagctg ctcatataaa ggataggcca gcgcgacgac cgccggttgc agcagatcgt
     2581 ttagcacttc gctaccttta aagtagctgt cgtaagagat gccggtcagc attaaaaaag
     2641 gaatgatcac caccattgct accagcaacg ggttaagcag gggaaactta taccgtgccg
     2701 ccagtttgcg ggcggcaaaa aagacaatca acgtcagcgg taatgaccac cagatattcg
     2761 ccatcattct tctgatcctt tctgacctac gactttacgt tcaccgtgta ccagttgtga
     2821 actccagctc accaccagaa aaaccaccag cgtactgaca gcacaggaaa ccactaccgg
     2881 gccaaactgc gcgcggagca aatcaaaata ttgcatgacg cctacgccaa tcggcacaaa
     2941 caatagcgcc atatagcgaa tcagtacgta gcaccccgga ttgacccatt tcgccggaag
     3001 aatttgcaag gccagcagga caaacaggat cagcatcccg atgatgctgc ccggaatggt
     3061 taccggtagc agggaagcaa tgaaaatgcc tgcatacagg caggcataaa tcaggacgaa
     3121 agcgcgtaaa tattgccaga taatgttcag tgtcttactc ataatcaaca ccccagatga
     3181 gatggattca tcatacaatt aattcgtaaa acgtgctacc gatcacatta agaaatcagc
     3241 gcttattttt tcgctccccg gcattacgca atgcgcaacg aactcaggca tacatcaagc
     3301 atagagaggg attgcagttt gcagcaatcc ctctttgtag acctttaatc cgctgaccat
     3361 aggcgctaac atagcgcctc attattttgc gggtgatgat atgcgtgtgt tactggcacc
     3421 gatggaggga gtgcttgact ctctggtgcg tgaattgctg accgaagtta acgactacga
     3481 tctgtgcatc accgagtttg tccgcgtggt ggatcaactg ctgccggtaa aagtttttca
     3541 tcgcatttgc cctgagctac aaaacgccag ccggacacca tccggtacgc tggtgcgcgt
     3601 gcagttgttg ggtcagttcc cacaatggct ggcagagaac gccgcccgtg cggtggaatt
     3661 aggttcctgg ggcgtggatc tcaattgcgg ctgcccgtcg aaaacggtca acggtagcgg
     3721 tggtggggcg acgttactca aagatcctga actcatctat cagggtgcaa aagcgatgcg
     3781 tgaagctgta ccggcgcatt tgcccgtcag cgtgaaagtg cgtctgggct gggacagcgg
     3841 tgagaagaaa tttgaaatcg ccgatgcggt tcaacaggct ggtgctacgg agctggtggt
     3901 gcatggacgg acaaaagagc agggttaccg cgcggagcat attgactggc aggcgattgg
     3961 cgagattcgc cagcggctga atattccggt gattgccaac ggcgaaatct gggactggca
     4021 gagcgcgcaa caatgcattg cgatcagcgg ctgcgacgca gtgatgattg gtcgcggggc
     4081 gctcaatatt cccaacctga gccgggtagt aaaatataac gaaccgcgaa tgccgtggcc
     4141 ggaggtggtt gctttgctgc aaaaatatac ccgtctggaa aagcagggcg ataccgggtt
     4201 atatcacgtt gcgcggatta aacagtggtt gagttatttg cgtaaagaat acgatgaagc
     4261 aacgggatta tttcagcatg ttcgggtgtt gaataattcc cctgatattg caagggctat
     4321 tcaggcaatt gatatcgaga aactctaaaa aaccatagtg atgttttttg acaatgtgtt
     4381 agctctttat caataggccg cacggttgtt tggtggcgtc aaaattgccg aggcgttccc
     4441 tgaaggccgg ggcagcccac atggatgtgg gctgagggcg cgttttacag ggatgttacc
     4501 tcgcgcccga cccggtagcc gtaagggata a
//
LOCUS       DAPGWB010000249         4428 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.251, whole genome shotgun sequence.
ACCESSION   DAPGWB010000249 DAPGWB010000000
VERSION     DAPGWB010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4428
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.251"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..209)
                     /gene="tuf"
                     /locus_tag="RHX79_004478"
     CDS             complement(<1..209)
                     /gene="tuf"
                     /locus_tag="RHX79_004478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDV2199565.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVE"
     gene            complement(324..399)
                     /locus_tag="RHX79_004479"
     tRNA            complement(324..399)
                     /locus_tag="RHX79_004479"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(364..366),aa:Thr,seq:ggt)
     gene            complement(406..480)
                     /locus_tag="RHX79_004480"
     tRNA            complement(406..480)
                     /locus_tag="RHX79_004480"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(445..447),aa:Gly,seq:tcc)
     gene            complement(597..681)
                     /locus_tag="RHX79_004481"
     tRNA            complement(597..681)
                     /locus_tag="RHX79_004481"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(645..647),aa:Tyr,seq:gta)
     gene            complement(690..765)
                     /locus_tag="RHX79_004482"
     tRNA            complement(690..765)
                     /locus_tag="RHX79_004482"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(730..732),aa:Thr,seq:tgt)
     gene            1127..2077
                     /gene="coaA"
                     /locus_tag="RHX79_004483"
                     /gene_synonym="panK"
     CDS             1127..2077
                     /gene="coaA"
                     /locus_tag="RHX79_004483"
                     /gene_synonym="panK"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HDV2199566.1"
                     /translation="MSIKEQTLMTPYLQFDRNQWAALRDSVPMTLSEDEIARLKGINE
                     DLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKS
                     TTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFV
                     SDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVF
                     VSDFVDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMT
                     LWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK"
     gene            complement(2106..3071)
                     /gene="birA"
                     /locus_tag="RHX79_004484"
     CDS             complement(2106..3071)
                     /gene="birA"
                     /locus_tag="RHX79_004484"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/biotin operon repressor BirA"
                     /protein_id="HDV2199567.1"
                     /translation="MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLR
                     DWGVDVFTVPGKGYSLPEPIQLLNAEEILSQLDGGSVAVLPVIDSTNQYLLDRIGELK
                     SGDACVAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEV
                     LRKLGADKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESV
                     VNQGWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPV
                     KLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLRSAEK"
     gene            complement(3068..4096)
                     /gene="murB"
                     /locus_tag="RHX79_004485"
     CDS             complement(3068..4096)
                     /gene="murB"
                     /locus_tag="RHX79_004485"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDV2199568.1"
                     /translation="MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVL
                     ILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMP
                     GLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDCVELATGKQVRLTAKECRFGYRD
                     SIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTHLDPTTVTPQQVFNAVCHMRTTKL
                     PDPKVNGNAGSFFKNPVVSAETAKALLAQFPTAPNYPQAGGSVKLAAGWLIDQCQLKG
                     MQMGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGE
                     VSAVETIS"
BASE COUNT         1130 a         1111 c          993 g         1194 t
ORIGIN      
        1 tattcaacgt gagaagtgtt gatggtgata ccacgagctt tttcttccgg cgcgttatcg
       61 atctggtcga atgcgcgagc agcaccgccg taggttttag ccagtacggt agtgattgca
      121 gcggtcagcg ttgttttacc atggtcaacg tggccgatag taccgacgtt aacgtgcggt
      181 tttgtacgtt caaacttttc tttagacatc gattgtccct ctaagacacg gataaatcgg
      241 tgatatcacc acatcaacca ggcaacatgc ccgacttgtt gaatgcaata aacagaagga
      301 aaaaacaggg aggagaaaag aagtggtgct gataggcaga ttcgaactgc cgacctcacc
      361 cttaccaagg gtgcgctcta ccaactgagc tatatcagca catcttggag cgggcagcgg
      421 gaatcgaacc cgcatcatca gcttggaagg ctgaggtaat agccattata cgatgcccgc
      481 atcctggaac tcggctacct gattttcatt ctgcactgaa tatcgagaga agctctcttt
      541 attcgagccg gtaagcgaac ttatcgtctc gggctacgcc atcgcgtggc cgaaattggt
      601 ggtgggggaa ggattcgaac cttcgaagtc tgtgacggca gatttacagt ctgctccctt
      661 tggccgctcg ggaaccccac cggacttgat ggtgccgact accggaatcg aactggtgac
      721 ctactgatta caagtcagtt gctctaccta ctgagctaag tcggcatcaa gtagcgcgca
      781 ttctatggag acatgcgagt tcatgcaact aaaaaattgc ataatttgtt ttattggtca
      841 cattttatgc gacacgatga agaaacagcc gaacggaggg cagattagca cactttttca
      901 acatcattgt gctcaacaat gcgctcctgc taaaccataa ttctttttat cagatggaat
      961 atctgtcaca ttgcttttca acgatagctt cctggcagag attttttctt attattcctc
     1021 cccatctggt gttaccctcc tgcccattaa cccattcaac agaactgtga cgcgccatgg
     1081 caaatatcgc tttgccgata gagctatgac cgccagaaac atgcttatga gtataaaaga
     1141 gcaaacgtta atgacgcctt acctacagtt tgaccgcaac cagtgggcag ctctgcgtga
     1201 ttccgtacct atgacgttat cggaagatga gatcgcccgt ctcaaaggta ttaatgaaga
     1261 tctctcgtta gaagaagttg ccgagatcta tttacctttg tcacgtttgc tgaacttcta
     1321 tataagctcg aatctgcgcc gtcaggcagt tctggaacag tttcttggta ccaacgggca
     1381 acgcattcct tacattatca gtattgctgg cagtgtcgcg gtggggaaaa gtacaaccgc
     1441 ccgtgtattg caggcgctat taagccgttg gccggaacat cgtcgtgttg aactgatcac
     1501 tacagatggc ttccttcacc ctaatcaggt tctgaaagaa cgtggtctga tgaagaagaa
     1561 aggcttcccg gaatcgtatg atatgcatcg cctggtgaag tttgtttccg atctcaaatc
     1621 cggcgtgcca aacgttacag cccctgttta ctcgcatctt atttatgatg tgatcccgga
     1681 tggagataaa acggttgttc agcctgatat tttaattctt gaagggttaa atgtcttaca
     1741 gagcgggatg gattatccac acgatccaca tcatgtattt gtttctgatt ttgtcgattt
     1801 ttcgatatat gttgatgcac cggaagactt acttcagacg tggtatatca accgttttct
     1861 gaaattccgc gaaggggctt ttaccgaccc ggattcctat tttcataact acgcgaaatt
     1921 aactaaagaa gaagcgatta agactgccat gacattgtgg aaagagatca actggctgaa
     1981 cttaaagcaa aatattctac ctactcgtga gcgcgccagt ttaatcctga cgaaaagtgc
     2041 taatcatgcg gtagaagagg tcagactacg caaataattt tcaggggagc taatgctccc
     2101 ctttcttatt tttctgcact acgcagggat atttcaccgc ccatccaggg ttttattatt
     2161 ccatcctgct caagcaataa agcgccctgt ttgtctattc cgcgtgaaat gccaaatatt
     2221 tctttatcac caatgataag tttcactggg cgattaataa aattatccag cttttcccag
     2281 cgcgaaagat aaggtgccaa tccttcttgt tcgaagagtt ccagcgccgc gcgtaattca
     2341 cgtattagca tggccgccaa cgtattacga tcgagattga tccccgcttc ctgcagcgtg
     2401 atccacccct gattaacgac actctcttca acacgacgca ttgccatgtt gatcccggct
     2461 ccaatgacta tttgcgccgc atcgccggtt ttgccagtca gctccacaag aatgcctgcc
     2521 agcttgcgat cctgcagata gaggtcatta ggccatttaa cacgaacttt atctgcaccc
     2581 agcttgcgta atacttccgc catcacgata ccgataacca gacttaaacc aatagccgcc
     2641 gccgggcctt gttccaaacg ccagaacatc gacaaatata agtttgcgcc aaaaggcgaa
     2701 aaccatttcc gaccccggcg accacggcca gcctgctggt attctgcaac gcaggcatcg
     2761 cccgatttaa gctctccgat acgatcaaga aggtactgat tcgtggagtc aatcactggc
     2821 agcacggcta cactaccgcc atccagctga ctcaatatct cttcagcatt aagtaactgg
     2881 ataggttcag gcaggctgta tcctttaccc ggaacggtaa agacatcaac gccccagtca
     2941 cgcagtgtct gaatgtgttt attaatagcc gcccggctca ttcccagcgt ttcacccaac
     3001 tgctcgccag agtgaaattc accgttcgct aacagggcaa tcaatttcag tggcacggtg
     3061 ttatccttca tgaaattgtc tccactgcgc tcacttcacc tgatgcacca ataaagcgga
     3121 cttcaggctc aagccagaca ttaaattttt cacccacttt ttgtcttaca tggtgtgcca
     3181 gttgcaccac atcttcgctt tttgcattgt cttcattaat gagaactaac gcctgttgac
     3241 ggtgcaccgc agccccaccc atttgcatcc cttttagctg gcactgatca ataagccaac
     3301 ctgctgccag ttttactgaa ccacccgcct gggggtaatt tggtgctgtt ggaaattgcg
     3361 ccagtaatgc tttagccgtt tcggcagata caacagggtt tttgaagaaa ctaccggcat
     3421 tgccattcac ttttggatca gggagtttgg tggtgcgcat atgacacacc gcattaaata
     3481 cttgctgtgg cgttactgtt gtaggatcca gatgagttaa gtcaccatac gttagtacag
     3541 gttgccactc ttttggcaga cgcagaccta cggctacaat ggcgaagcga tcctggtatt
     3601 catgtttaaa aatactgtcg cgatagccaa aacggcactc tttggcagtt aagcgcactt
     3661 gcttgcctgt cgccagttca acacaatcaa cataagcgca aactcgctgt aattctacgc
     3721 cataagcacc aatattctgg ataggtgatg agccgacaca accaggaatt aatgccagat
     3781 tttccagacc aggcatacct tcctgcaaag tgtattttac caggcgatgc cagttttctc
     3841 cggctcctac atgtaaatac cacgcatcag gttcatcatg aatttcgata cctttgatcc
     3901 ggttgatgat caccgtgccg cgatagtctt ccagaaaaag tacattactt ccttcaccca
     3961 gaataagaac gggttgtcct tctgcggttg catactgcca ggcattgagt aattgttgtt
     4021 cgtcttcggc acatacaatg tgctgagcat tatgatcaat gccaaatgtg ttccagggtt
     4081 ttaaggagtg gttcatagct gctttcctga tgcaaaaacg aggctagttt accgtatctg
     4141 tggggggatg gcttgtagat atgacgacag gaagagtttg tagaaacgca aaaaggccat
     4201 ccgtcaggat ggccttctgc ttaatttgat gcctggcagt ttatggcggg cgtcctgccc
     4261 gccaccctcc gggccgttgc ttcgcaacgt tcaaatccgc tcccggcgga tttgtcctac
     4321 tcaggagagc gttcaccgac aaacaacaga taaaacgaaa ggcccagtct ttcgactgag
     4381 cctttcgttt tatttgatgc ctggcagttc cctactctcg catgggga
//
LOCUS       DAPGWB010000250         4356 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.252, whole genome shotgun sequence.
ACCESSION   DAPGWB010000250 DAPGWB010000000
VERSION     DAPGWB010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4356
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.252"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            3..518
                     /gene="fimA"
                     /locus_tag="RHX79_004486"
     CDS             3..518
                     /gene="fimA"
                     /locus_tag="RHX79_004486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000843548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial major subunit FimA"
                     /protein_id="HDV2199569.1"
                     /translation="MAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVT
                     LGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASST
                     NTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQA
                     NADATFIMRYE"
     gene            738..1430
                     /gene="fimC"
                     /locus_tag="RHX79_004487"
     CDS             738..1430
                     /gene="fimC"
                     /locus_tag="RHX79_004487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria chaperone FimC"
                     /protein_id="HDV2199570.1"
                     /translation="MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTA
                     VWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAAD
                     RESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR
                     SGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVSSQIPLPSGVQGKLKFQTVNDY
                     GSVTPVREVNLN"
     gene            1461..4070
                     /locus_tag="RHX79_004488"
     CDS             1461..4070
                     /locus_tag="RHX79_004488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis usher protein"
                     /protein_id="HDV2199571.1"
                     /translation="MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFL
                     LENGTSVADLSRFERGNHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMP
                     CFNQVLLERIGLNSSAFPELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQITL
                     LSSAHGYIPPEEWDEGIPALLLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSW
                     NYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDN
                     MYPDSQQGFAPTVRGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDV
                     TIDERDGNQQNYTIPYSTVPILQREGRFKFDLTAGDFRSGNSQQSSPFFFQGTALGGL
                     PQEFTAYGGTQLSANYTAFLLGLGRNLGNWGAVSLDVTHARSQLADDSRHEGDSIRFL
                     YAKSMNTFGTNFQLMGYRYSTQGFYTLDDVAYRRMEGYEYDYDYDGEHRDEPIIVNYH
                     NLRFSRKDRLQLNISQSLNDFGSLYISGTHQKYWNTSDSDTWYQVGYTSSWVGISYSL
                     SFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYTRENALDRAYASFNANRNSNGQNSW
                     LAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQATYGTLGVGYNYDRDQHDVNW
                     QLSGGVVGHENGITLSQPLGDTNVLIKTPGAGGVRIENQTGILTDWRGYAVMPYATVY
                     RYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIGVRALITVTQGGKPVPF
                     GSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANSRCIAHYVLPKQSLQQA
                     VTVISAVCTHPGS"
     gene            4083..>4356
                     /locus_tag="RHX79_004489"
     CDS             4083..>4356
                     /locus_tag="RHX79_004489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308622.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HDV2199572.1"
                     /translation="MKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNIFN
                     STNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQET"
BASE COUNT         1162 a          955 c         1030 g         1209 t
ORIGIN      
        1 cgctggctgc cgcactattc gccgctacgg gtagttatgc tgccgttgta gatggcggta
       61 caattcactt tgaaggcgaa ctggtgaatg ctgcctgttc agtgaatact gactcggcag
      121 accaggttgt cacactcggt caatatcgta ccgatatttt caatgctgtt ggtaatacct
      181 ctgcattaat tccattcacc attcagttga acgactgcga tcctgttgtt gccgctaatg
      241 ctgccgttgc attttctggt caggctgatg caatcaatga taatttattg gccattgcat
      301 ccagtaccaa tacaacaaca gcaacgggtg tcggtattga aatacttgat aatacatccg
      361 caattctcaa acctgatggg aatagcttct caaccaacca gaacttgatc cccggaacca
      421 acgttcttca tttttctgca cgttataaag gcaccggtac aagtgcatca gcagggcaag
      481 caaatgctga cgcgactttt attatgagat acgaataatc aaaaccacgt tgttttgaat
      541 tatatatcac gtcttataac aaagtaatgt accggttgtc tgaagcggta tggtggcaat
      601 gtaaatcgaa atcatgttca ctttgtatca tgccgcttta ttaaatgaaa agggaatgat
      661 gtgttgtaag aaaccaaagc aatcatttct ttatatttct tatttttgcc gtcaggaata
      721 cacaaggcgt attaactatg atgactaaaa taaagttatt gatgctcatt atattttatt
      781 taatcatttc ggccagcgcc catgctgccg gagggatcgc attaggtgcc acgcgtatta
      841 tttatcccgc tgatgctaaa cagactgcgg tatggattag aaatagccat accaatgagc
      901 gttttctggt caattcgtgg attgaaaaca gcagcggtgt aaaagaaaag tcattcatca
      961 ttacaccgcc actgtttgtt agtgaaccca aaagcgaaaa tactttgcgt attatttaca
     1021 ccggtccacc gctggcagca gatcgtgagt ctctgttctg gatgaatgtt aagacgatcc
     1081 cttcggtaga taaaaatgca ttgaacggca ggaatgtttt gcaactggcg attttatcgc
     1141 gcatgaaatt atttctccgt ccaattcaat tacaagaatt acccgcagaa gcgccggaca
     1201 cactcaagtt ttcgcgatcc ggtaactata tcaatgttca taatccatca cctttttatg
     1261 tcaccctcgt taacctgcaa gtgggcagcc aaaagttggg gaatgctatg gcggcaccca
     1321 gagttagttc acaaattccc ttaccctcag gagtgcaggg aaagctgaaa tttcagaccg
     1381 ttaatgatta tggttcagta accccggtca gagaagtgaa cttaaactaa ccgaatcatc
     1441 tgacaatatc agagctaatt atgaaaatac ccactactac ggatattccg cagaggtata
     1501 cctggtgtct ggccggaatt tgttattcat ctcttgccat tttaccctcc tttttaagct
     1561 atgcggaaag ttatttcaac ccggcatttt tattagagaa tggcacatcc gttgctgatt
     1621 tatcgcgctt tgagagaggc aatcatcaac ctgcgggagt gtatcgggtg gatctctggc
     1681 gtaatgatga gttcattggt tcacaggata tcgtatttga atcgacaaca gaaaatacag
     1741 gtgataaatc aggtgggtta atgccctgtt ttaaccaggt actccttgaa cgaattggcc
     1801 ttaatagcag tgcatttccc gagttagccc agcagcaaaa caataaatgc atcaatttac
     1861 tgaaagctgt acctgatgcc acaattaact ttgattttgc agcgatgcgc ctgaacatca
     1921 ctattcctca gataacgttg ttgagtagcg ctcacggtta cattccgcct gaagagtggg
     1981 atgaaggtat tcctgcttta ctcctgaatt ataatttcac cggtaacaga ggtaatggta
     2041 acgatagcta tttttttagt gagctcagcg ggattaatat tggcccgtgg cgtttacgca
     2101 acaatggttc ctggaactat tttcgcggaa atggatatca ttcagaacag tggaataata
     2161 ttggcacctg ggtacagcgc gccattattc cgctgaaaag tgaactggta atgggagacg
     2221 gcaatacagg aagtgatatt ttcgatggtg ttggatttcg tggtgtacgg ctttattctt
     2281 ccgataatat gtatcctgat agccagcaag ggtttgcccc aacggtacgt gggattgccc
     2341 gtacggcggc ccagctaacg attcggcaaa atggttttat tatctatcaa agctatgttt
     2401 cccccggcgc ttttgaaatt acagatttgc acccgacatc ttcaaatggc gatctggacg
     2461 tcaccatcga cgagcgcgat ggtaatcagc agaattacac tatcccgtat tcaacagtgc
     2521 caattttaca acgcgaaggg cgtttcaaat ttgacctgac ggcgggcgat tttcgtagcg
     2581 gtaatagtca gcaatcatcg cctttctttt ttcagggcac ggcactcggc ggtttaccac
     2641 aggaatttac tgcctacggc gggacgcaat tatctgccaa ttacaccgcc tttttattag
     2701 ggctggggcg caacctcggg aactgggggg cagtgtcgct ggatgtgacc catgcgcgca
     2761 gtcagttagc cgacgacagt cgtcatgagg gggattccat tcgcttcctc tatgcgaaat
     2821 cgatgaacac cttcggcacc aattttcagt taatgggtta ccgctattcg acacaaggtt
     2881 tttataccct tgatgatgtt gcgtatcgtc gaatggaggg gtacgaatat gattacgatt
     2941 acgacggtga gcatcgcgat gaaccgataa tcgtgaatta ccacaattta cgctttagcc
     3001 gtaaagaccg tttgcagtta aatatttcac aatcacttaa tgactttggc tcgctttata
     3061 tctctggtac ccatcaaaaa tactggaata cttcggattc agatacctgg tatcaggtgg
     3121 ggtataccag cagctgggtt ggcatcagtt attcgctctc attttcgtgg aatgaatctg
     3181 tagggatccc cgataacgaa cgtattgtcg gacttaatgt ttcagtgcct ttcaatgttt
     3241 tgaccaaacg tcgctacacc cgggaaaatg cgctcgaccg cgcttatgcc tcctttaacg
     3301 ccaaccgtaa cagcaacggg caaaatagct ggctggcagg tgtaggtggg accttactgg
     3361 aaggccacaa cctgagttat cacgtaagcc agggtgatac ctcgaataat gggtatacgg
     3421 gcagcgccac ggcaaactgg caggccactt acggtacgct gggggtcggg tataactacg
     3481 accgcgatca acatgacgtt aactggcagc tgtctggcgg tgtggtcggg cacgaaaatg
     3541 gcataacgct gagccagcct ttaggggata ccaatgtttt gattaaaacg cctggcgcag
     3601 gcggtgtacg cattgaaaat caaactggca ttttaaccga ctggcgcggc tatgcggtga
     3661 tgccgtatgc cacggtttat cggtataacc gtatcgcgct tgataccaat acgatgggga
     3721 attccatcga tgttgaaaaa aatattagca gcgttgtgcc gacgcaaggc gcgttggttc
     3781 gtgccaattt tgatacccgc ataggcgtgc gggcgctcat taccgttacc cagggcggaa
     3841 aaccggtgcc gtttggatca ctggtacggg aaaacagtac cggaataacc agtatggtgg
     3901 gtgatgacgg gcaagtttat ttaagtggtg cgccattgtc tggtgaatta ctggttcagt
     3961 ggggagacgg cgcgaactca cgctgcattg cgcactatgt attgccgaag caaagcttac
     4021 agcaagccgt cactgttatt tcggcagttt gcacacatcc tggctcataa aggaaattat
     4081 caatgaagat aatctgcaga ttattattgg cgatggcatg tttgtgtctg gcaaacatat
     4141 cctgggctac tgtttgtgca aatagtactg gcgtagcaga agatgaacac tatgatctct
     4201 caaatatctt taatagcacc aataaccagc cagggcagat tgttgtttta ccggaaaaat
     4261 ccggctgggt aggtgtgtca gcaatttgtc cacccggcac gctggtgaat tatacatacc
     4321 gtagttatgt caccaacttt attgttcagg aaacta
//
LOCUS       DAPGWB010000251         4278 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.253, whole genome shotgun sequence.
ACCESSION   DAPGWB010000251 DAPGWB010000000
VERSION     DAPGWB010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4278
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.253"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..525
                     /locus_tag="RHX79_004490"
     CDS             <1..525
                     /locus_tag="RHX79_004490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HDV2199573.1"
                     /translation="QFVAERPDQLWVADFTWVSTWQGFVYVAFIIDVFAGYIVGWQVS
                     SSMETTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDS
                     YDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAE
                     KAYYASIGNNDLAA"
     gene            1887..2864
                     /locus_tag="RHX79_004491"
     CDS             1887..2864
                     /locus_tag="RHX79_004491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052630.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HDV2199574.1"
                     /translation="MDKSSGELVTLTPNNNNTVQPVALMRLGVFVPTLKSLKNSKKNT
                     LSRTDATEELTRLSLARAEGFDKVEITGPRLDMDNDFKTWVGIIHSFARHNVIGDKVE
                     LPFVEFAKLCGIPSSQSSRRLRERISPSLKRIAGTVISFSRTDEKHTREYITHLVQSA
                     YYDTERDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFIESLPRDPA
                     PISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQRGRTKLFCIHYRRPR
                     LKAPNDESKENPLPPSPAEKVSPEMAEKLALLEKLGITLDDLEKLFKSR"
     gene            complement(3149..3889)
                     /locus_tag="RHX79_004492"
     CDS             complement(3149..3889)
                     /locus_tag="RHX79_004492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDV2199575.1"
                     /translation="MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAY
                     LLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGEARMLTPESFDLDGVRPFVRILSEK
                     VRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAV
                     RRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFAL
                     DMAATLAVPFTGDGRDAAEILRTLPPLR"
     gene            complement(4010..4270)
                     /locus_tag="RHX79_004493"
                     /pseudo
     CDS             complement(4010..4270)
                     /locus_tag="RHX79_004493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001312821.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1108 a         1025 c         1087 g         1058 t
ORIGIN      
        1 cagttcgtgg cagaacgtcc agaccagttg tgggtggctg attttacctg ggtaagcaca
       61 tggcagggct tcgtttatgt ggcgttcatc attgatgtgt tcgccggata catcgtggga
      121 tggcaggtct catcatccat ggaaacaaca ttcgtgctgg atgcactgga gcaggcgttg
      181 tgggcccgtc ggccgtccgg cacaatccat cacagtgata aaggttctca gtatgtatcg
      241 ctggcctaca cgcagcggct taaggaagcc ggattactgg catcaacagg aagtacaggc
      301 gactcgtatg acaacgcgat ggcggagagc atcaatggtc tttacaaagc ggaggtaata
      361 caccgtaaga gctggaaaaa ccgtgcagaa gtggaactgg ccacactaac gtgggtggac
      421 tggtataaca atcgacgatt gctggaaagg ctgggccata ctcctccggc agaagcagaa
      481 aaagcttatt atgcttccat cggaaataat gatctggcag cctgagttca cagataaaat
      541 actctccagg aaacccgggg cggttcagca tgaccggatt tttatcagtg ggtagacagt
      601 tgggagtgaa gcctgaacac acccattgtt gtctgtgcac atcaagcgtg gccagaatac
      661 gacccgacgc gctgtaaatt gcaaactgat gtgtatatac cgaaccggta tatcctggcg
      721 gtacagggtt tatttttaac cataggaatt tatgaccaca acgtgtcaga taattccaga
      781 catgaactat tgatgcgcgc atttagttcc ttagtaaaaa gtcaccaatg gtaattatga
      841 tgtgcagcat aatcagctgc acatacctct acatctgtca ctctaatgac tttctcctac
      901 cgcaatcatc actccactga taataatcag acatatagac acattattaa attaacgaat
      961 ggccgttccg gtgagatccg attttctgtc ttataacaac tttccggaag tgtaacacgg
     1021 ttgcgtcttg gctcttgcac ccttttctgt cgttgtgaac gggcccacag ggaatgaagg
     1081 agacacaata tatagtgtca ttagcatcta aattaagcac tatatgttgt gctgacagaa
     1141 ggtggcgttg ttgtggggga aaaggaagat ccgtaactat caggactctg acgattagtc
     1201 ttaagactgt cggtaaatta agtgatatca gttgtcagga tattcatgga gtcagtctgt
     1261 atgcaccttt gccattgaaa caaacatatg aagtgtattt cggatatgac tgtacgctca
     1321 ggaagtacgg cagattccgt caaaaattac ctgtaaagac agacttcaga aaaaacagtg
     1381 ctcgccgcag accggtgacc gggcgaagcc cgcgaaccgg cgaggaagcg caatatatct
     1441 gtagttacag tgagcaggta cgccctgaag ccttcataat cggtagtgta cgttgttttt
     1501 ctggaatgat ttatccacat atccggaggc tcgatccagt aaacagatcc atgaatgatc
     1561 aacaaaggat ccattaaaga tccccatatc gctgcaaacc ttgtcattaa tggtccggga
     1621 gcacgatcac ataagctgtg gcatgttact gataaactgt aacaagttaa tgataagctg
     1681 tattaagtaa tacatatact gcagtaagtt aatgacataa actatggtca gtacgccaga
     1741 ctcagctgtt aaatacaggc tgcagatttt tcttcagtca gttagcgggg ttctgacatc
     1801 cgattttctg tttattcttt tactgtccac aggcaggagg ctttctggaa aacgaaaatt
     1861 cagacatcaa aaaactgttc ggcgaggtgg ataagtcgtc cggtgagctg gtgacactga
     1921 caccaaacaa taacaacacc gtacaacctg tggcgctgat gcgtctgggc gtttttgtac
     1981 cgacccttaa atcactgaag aacagtaaaa aaaatacact gtcacgtact gatgccacgg
     2041 aagagctgac tcgtctttcc ctggcccgtg ctgagggatt cgataaggtt gagatcaccg
     2101 gcccccgcct ggatatggat aacgatttca agacctgggt ggggatcatt cattcctttg
     2161 cccgccataa cgtgattggt gacaaagttg aactgccttt tgtcgagttt gcaaaactgt
     2221 gtggtatacc ttcaagccag tcatcccgca ggctgcgtga gcgcatcagc ccttccctga
     2281 agcgcattgc cggtaccgtg atttcgtttt cccgtaccga tgagaagcac acccgggaat
     2341 acatcaccca tctggtacag tcagcctact acgatactga acgggatatt gttcagttac
     2401 aggctgatcc ccgccttttt gaactgtacc agtttgacag aaaggtcctt cttcagctta
     2461 aggcgattaa tgccctgaag cgacgggagt ccgcccaggc actttacacc tttatagaga
     2521 gcctgccccg ggatccggca ccgatatcgc tggcgcggct gcgtgcacgc ctcaatctga
     2581 agtctcctgt attttcccag aaccagacgg tcagacgggc aatggagcag ctgcgcgaga
     2641 ttggatatct tgattacacg gagatccagc gggggcggac aaaactcttc tgcattcact
     2701 accggcgtcc ccggttaaaa gcaccgaatg atgagagtaa ggaaaatccg ttgccacctt
     2761 cacctgcgga aaaagtcagt ccggagatgg cggagaaact tgccctgctt gaaaaactgg
     2821 gcatcacact ggatgacctg gaaaaactct tcaaatcccg ctgaacataa actgtagtca
     2881 gtgaagaacg cccctttact gactacagct tatattaacc ggtgcagtga gtgctctgct
     2941 cactgcagtt tatattctgt ttcctgcagt gctgtctgta gctgagctgc catctgcctg
     3001 tcccttacgt aagtgatccc gtaacctgat gctgaggcat tgctcccttc ataaaacatg
     3061 acttactcac tacagcttat atacatactc cagcttatgt tatgtctgtt ctgctgacca
     3121 cagcttatat aaggaagcgc gtatgccgtc acctcagggg aggcagtgta cgcaggatct
     3181 ccgcagcatc ccgcccgtca cctgtgaaag gcactgccag cgtggcagcc atatccagtg
     3241 caaacactct ggtataaacc tccatagaac gtggatccct gtgaccagcc agtgcctgga
     3301 tgactttccg gggctggcgg tgatagagca tgtgcatgat atagctgtgc cggaaggtgt
     3361 gtggtgtgac cggaatcgaa aagtgtactc cgtcagcttc ggcccgtctg acagcctgct
     3421 tcagccagtt gcgcatggtt tcgtcggtca cggcccataa tggttcacga cgacggggcc
     3481 gggtggtgat catccagctt tccatctgcc tgacatagct tatatccgtc agcggaacca
     3541 ggcggacttc atcttttggc gggcgtccgc gtcgcgcacg cactttttcg gacaggatcc
     3601 gcacaaacgg tcttactcca tccaggtcaa atgattccgg tgtcagcatc cgggcttcgc
     3661 caatacgcat tccggtattc cagagggtgg cgaacagcat atggtgacgc tgatccggca
     3721 tatagaaaag aagggcactc acttccgggg ccagcaggta ggccggtgtg gcccctgtgg
     3781 aagtggccat tcttctcagg gagagcgctg ttgcaaaatc cacccccggc gcaatgggta
     3841 acagggaaac gcgttctggt gaattctgca ggggaatgac attgttcatg agttattttt
     3901 cacgtagcac acgcactgtt tatggataca ggtattctga cctgaacgcc cggatccttc
     3961 cacgacaata aatcgcagcg cgcggatcct tttgtttgct tatcacgcat tattgcgggt
     4021 aaaaccaaat acgtaaaggt atgttttgca gcagggatcc cgtattaagc cagtcgtggc
     4081 gcgggctgag ggctggtttg ccgtttttgg gagaattggg gtaatgccag gatgaatggg
     4141 atcggagaaa acagagaaag ggaacagaaa gggagaaggt gcaccacgtg tattctggcc
     4201 cgggacgtca ccgtccccct gacagtttga ctttacacag gaaggttgca gactcagcat
     4261 aatgactgat ttatatgc
//
LOCUS       DAPGWB010000252         4262 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.254, whole genome shotgun sequence.
ACCESSION   DAPGWB010000252 DAPGWB010000000
VERSION     DAPGWB010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4262)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4262)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4262
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.254"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..298)
                     /locus_tag="RHX79_004494"
     CDS             complement(<1..298)
                     /locus_tag="RHX79_004494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2199576.1"
                     /translation="MRRTNHRNLVNVGILSGRIPLISLVQFIAVAEHLNFRHAAKALG
                     ISQSSVSARVKALEDNLGVLLFERHARGVRLTDAGRHFMERVTAGVDQLDHAVKT"
     gene            complement(326..1540)
                     /gene="floR"
                     /locus_tag="RHX79_004495"
     CDS             complement(326..1540)
                     /gene="floR"
                     /locus_tag="RHX79_004495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol/florfenicol efflux MFS
                     transporter FloR"
                     /protein_id="HDV2199577.1"
                     /translation="MTTTRPAWAYTLPAALLLMAPFDILASLAMDIYLPVVPAMPGIL
                     NTTPAMIQLTLSLYMVMLGVGQVIFGPLSDRIGRRPILLAGATAFVIASLGAAWSSTA
                     PAFVAFRLLQAVGASAMLVATFATVRDVYANRPEGVVIYGLFSSMLAFVPALGPIAGA
                     LIGEFLGWQAIFITLAILAMLALLNAGFRWHETRPLDQVKTRRSVLSIFASPAFWVYT
                     VGFSAGMGTYFVFFSTAPRVLIGQAEYSEIGFSFAFATVALVMIVTTRFAKSFVARWG
                     IAGCVARGMALLVCGAVLLGIGELYGSPSFLTFILPMWVVAVGIVFTVSVTANGALAE
                     FDDIAGSAVAFYFCVQSLIVSIVGTLAVALLNGDTAWPVICYATAMAVLVSLGLVLLR
                     LRGAATEKSPVV"
     gene            complement(1757..2203)
                     /locus_tag="RHX79_004496"
                     /pseudo
     CDS             complement(1757..2203)
                     /locus_tag="RHX79_004496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747810.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3363 domain-containing protein"
     gene            complement(2672..4165)
                     /locus_tag="RHX79_004497"
     CDS             complement(2672..4165)
                     /locus_tag="RHX79_004497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISVsa3 family transposase"
                     /protein_id="HDV2199578.1"
                     /translation="MPHVAARTASRDRDTGRYQSHRPEQTLLYQIVDEYYPAFAALMA
                     EQGKELPGYVQREFEEFLQCGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARR
                     MAESAALLVDEVLPEQPMRQWVLSFPFQLRFLFASRPEIMGWVLGIVYRVIATHLVKK
                     AGHTHQVAKTGAVTLIQRFGSALNLNVHFHMLFLDGVYVEQSHGSARFRWVKAPTSPE
                     LTQLTHTIAHRVGRYLERQGLLERDVENSYLASDAVDDDPMTPLLGHSITYRIAVGSQ
                     AGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGVAARADERKKLERLCRYISRPAVSE
                     KRLSLTRGGNVRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTRFHGVFAPN
                     SRHRALVTPAKRGRGNKVRVADEPATPAQRRASMTWAQRLKRVFNIDIETCSGCGGAM
                     KVIACIEDPIVIKQILDHLKHKAETSGTRALPESRAPPAELLLGLFD"
BASE COUNT          906 a         1317 c         1229 g          810 t
ORIGIN      
        1 cggtcttcac tgcgtgatcg agttgatcga cacccgccgt gacacgctcc atgaagtgcc
       61 tgcctgcgtc tgttagccga acgccccgcg catggcgctc aaatagcagg acaccaaggt
      121 tatcctccag cgctttcaca cgcgcgctga cgctcgactg gctgatacca agtgccttgg
      181 ccgcatgccg aaaattcaga tgctcggcga cggcgatgaa ctgaacaagg gaaatgagcg
      241 gtatcctgcc agacaggata ccgacattca cgaggtttcg atggttagtg cgccgcatcg
      301 gagcgggcct gctaccagtc gtcggttaga cgactggcga cttctcggtg gcagccccac
      361 ggagccgaag gagcaccagc cccaacgaaa ccagtaccgc catcgccgtg gcgtaacaga
      421 tcacgggcca cgctgtgtca ccgtttaaaa gtgccaccgc caatgtcccg acaatgctga
      481 ctatcaggct ttgaacgcag aagtagaacg cgaccgctga tcccgcgatg tcgtcgaact
      541 ctgccaaagc gccgttcgcg gtaacggaca ccgtgaagac aataccgacc gcgacaaccc
      601 acatcggtag gatgaaggtg aggaatgacg gcgagccgta aagttcgccg atccccaaca
      661 ggaccgctcc gcaaacaagc aacgccatcc cacgcgccac gcatcctgcg atgccccatc
      721 tggcgacaaa ggacttcgcg aaacgggttg tcacgatcat tacaagcgcg acagtggcga
      781 aggcaaagct gaatccgatc tcggaatatt ccgcttggcc tatgagcaca cggggagccg
      841 tcgagaagaa gacgaagtag gtgcccatac cggcgctaaa gccgacagtg taaacccaaa
      901 aagccggact cgcgaagatc gacaagacag atcggcgcgt cttgacttga tccagagggc
      961 gggtttcgtg ccacctgaaa cccgcattta ggagtgcgag catcgccagt atagccaaag
     1021 taatgaatat cgcctgccat cccaagaact cgccgatcaa tgctccggcg atagggccga
     1081 gcgcaggcac gaacgccagc atcgaactga aaaggccgta gatgacgaca ccctcaggac
     1141 ggttggcata aacgtcgcga accgtcgcga acgtcgccac cagcatggcc gacgcgccca
     1201 ctgcttgaag tagacggaaa gcgacaaagg ccggtgcagt tgaagaccaa gctgctccca
     1261 gagacgcaat gacgaaagcc gttgcgcccg caagtagaat tggccgtcgc ccgattctgt
     1321 ctgagagcgg accaaaaatc acctggccca cgccgagcat caccatatag aggctcaacg
     1381 tgagttggat catagcgggc gtcgtgttca ggatgccggg catcgctgga acgacaggga
     1441 gataaatatc catcgccagt gaagcgagga tgtcgaaagg agccatcagc agcagtgctg
     1501 ccggcagcgt ataggcccac gcggggcgtg tggtggtcat gacgaatcaa ccctcgatta
     1561 aggaataccg ggcgacgtct gctcgtcagc aatcagatga gactagcctt acagagcgcc
     1621 gcaacaacaa tactggttgt tgcggcttac ttgtctgctg acttggaatt tcccatctga
     1681 ttactccacg cttacgaata tgaattgcta cattttatcc gattatcttt tgcttcgcaa
     1741 tgcggcatgg gcgcactcag cgttccagcc ccctctgccg ccctaactgc cacgacaccg
     1801 acccgccctg cacgatgccc ataacctcgc ggccgagttg gcggtcgatg atcggccgcc
     1861 acgggacaag ggtgaactca tgggatttct cgaccacggc gaacttgccg ctcgatagat
     1921 gcacggttcc ggtaaacttg ccgctgacgc tctcgccgtc cgtggcggcg cggaacggca
     1981 ggcccttact caaagccata tccgatccga cgccgactac ctcgcgctcc cgcaggatgg
     2041 cgagaaggtt gcgccggtag aagacgcggc tgtcccggct gcgggtggcg tcgccctgtt
     2101 cgatatggtg ctcgcggcgc tggtccatgg cttcgcggac ttgttgcccg aagccggttg
     2161 gcgcaaggtc ggccgtctcg ccgtggatca gccgccggtc cagccaggtc gcgccgtccg
     2221 atccgatctg tttgttcaga tcgaccgggg aaaggacgcg aacgctggcc tgactgtctc
     2281 ggccggcgtc atgggcggcg gcacggctga ccagatcatc ggggatgcgc cattggtcgg
     2341 cgtcgatccg ctcgacgata ccggcccggc gtagcgcctc cagccggcgc acatgggcat
     2401 cgacatagcc ctcatagtcg ccgcctggaa cgcggcacgt ataggaagaa taaacgccct
     2461 tttcacccaa gtccaacagc tttggaccgc agttgactct ttcgacaccc ctgcgatgca
     2521 acccaatccg gctgacgggg agccagcaac gctgaaaatt taccctcctc tttcccacta
     2581 gcggctcctt ttccgacaac cagcacggcg gatccctgcc gcggcgctgt gaacgcagca
     2641 ttttgattgg tatcgttggc cttcaggctc gtcagtcaaa cagacccagg agcagctcag
     2701 ccggtggcgc ccggctttcg ggtaacgccc tggtcccgct ggtttcggct ttgtgcttca
     2761 ggtgatcaag gatctgcttg atcactatag ggtcttcaat gcaggcgatg actttcatgg
     2821 cgccgccgca gccgctgcag gtctcgatgt cgatattgaa aacacgcttg agccgttgcg
     2881 cccatgtcat cgacgctcgc cgttgtgctg gtgttgccgg ttcatcagcc accctgacct
     2941 tgttgcccct gccccgtttt gccggcgtga ccaacgcccg gtgccgactg ttgggtgcga
     3001 acaccccgtg gaagcgggtt aggttgactc tgggcttcgg taccagggcg gccagccttg
     3061 caatgaaatc caatggttcg aaaatgacgt gcgtggtgcc gtcccggtac ggcgtcttga
     3121 gctggtagcg cacgttgccg cctcgtgtta acgacagccg cttctcggat accgccgggc
     3181 ggctgatgta ccggcacagc cgttcgagct tcttgcgttc atcggccctg gccgccacgc
     3241 cggcgtgcag gctggacccg gctaccttgc caatcccgtc accgaacgga tcaccactgg
     3301 tcggcagagt ttgcaaagtg aacacctttc gccccgcctg tgaaccgaca gcgatacggt
     3361 aagtgatcga gtgccccagc aggggtgtca tcgggtcgtc atccaccgca tccgaggcca
     3421 gatagctgtt ttcgacatcc cgttccagca ggccttgccg ttccagatag cgacccaccc
     3481 ggtgggcgat ggtgtgcgtc agctgggtga gctctgggct ggtcggcgcc ttgacccagc
     3541 ggaaacgcgc tgagccgtgg gattgctcga catacacacc gtcgagaaac agcatgtgga
     3601 agtgaacatt cagattgagc gccgatccaa aacgctggat cagggtgacc gcgcccgtct
     3661 tggccacttg gtgggtatgg cccgctttct tgaccaggtg cgtggcaatg acgcggtaaa
     3721 cgatgcccag cacccacccc atgatctcgg gccggctggc aaacaggaaa cgcagctgaa
     3781 acgggaagct caacacccac tgacgcatgg gttgttcagg cagtacttca tcaaccagca
     3841 aggcggcact ttcggccatc cgccgcgccc cacagctcgg gcagaaaccg cgacgcttac
     3901 agctgaaagc gaccaggtgc tcggcgtggc aagactcgca gcgaacccgt agaaagccat
     3961 gctccagccg cccgcattgg agaaattctt caaattcccg ttgcacatag cccggcaatt
     4021 cctttccctg ctctgccata agcgcagcga atgccgggta atactcgtca acgatctgat
     4081 agagaagggt ttgctcgggt cggtggctct ggtaacgacc agtatcccga tcccggctgg
     4141 ccgtcctggc cgccacatga ggcatgttcc gcgtccttgc aatactgtgt ttacatacag
     4201 tctatcgctt agcggaaagt tcttttaccc tcagccgaaa tgcctgccgt tgctagacat
     4261 tg
//
LOCUS       DAPGWB010000253         4220 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.255, whole genome shotgun sequence.
ACCESSION   DAPGWB010000253 DAPGWB010000000
VERSION     DAPGWB010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4220)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4220)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4220
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.255"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..2570)
                     /gene="traG"
                     /locus_tag="RHX79_004498"
     CDS             complement(<1..2570)
                     /gene="traG"
                     /locus_tag="RHX79_004498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001007007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer mating pair stabilization
                     protein TraG"
                     /protein_id="HDV2199579.1"
                     /translation="MNEVYVIAGGEWLRNNLNAIAAFMGTWTWDSIEKIALTLSVLAV
                     AVMWVQRHNVMDLLGWVAVFVLISLLVNVRTSVQIIDNSDLVKVHRVDNVPVGLAMPL
                     SLTTRIGHAMVASYEMIFTQPDSVTYSKTGMLFGANLIVKSTDFLSRNPEIINLFQDY
                     VQNCVLGDIYLNHKYTLEDLMASADPYTLIFSRPSPLRGVYDNNNNFITCKDASVTLK
                     DRLNLDTKTGGKTWHYYVQQIFGGRPDPDLLFRQLVSDSYSYFYGSSQSASQIMRQNV
                     TMNALKEGITSNAARNGDTASLVSLATTSSMEKQRLAHVSIGHVTMRNLPMVQTILTG
                     IAIGIFPLLILAAVFNKLTLSVLKGYVFALMWLQTWPLLYAILNSAMTFYAKQNGAPV
                     VLSELSQIQLKYSDLASTAGYLSAMIPPLSWMMVKGLGAGFSSVYSHFASSSISPTAS
                     AAGSVVDGNYSYGNMQTENVNGFSWSTNSTTSFGQMMYQTGSGATATQTRDGNMVMDA
                     SGAMSRLPVGINATRQIAAAQQEMAREASNRAESALHGFSSSIASAWNTLSQFGSNRG
                     SSDSVTGGADSTMSAQDSMMASRMRSAVESYAKAHNISNEQATRELASRSTNASLGLY
                     GDAYAKGHLGISVLGNGGGVGLQAGAKASIDGSDLDSHEASSGSRASHDARHDIDARA
                     TQDFKEASDYFTSRKVSESGSHTDNNADSRVDQLSAALNSAKQSYDQYTTNMTRSHEY
                     AEMASRTESMSGQMSEDLSQQFAQYVMKNAPQDVEAILTNTSSPEIAERRRAMAWSFV
                     QEQVQPGVDNTWRESRRDIGKGMESVPSGGGSQDIIADHQGHQAIIEQRTQDSNIRND
                     V"
     gene            complement(2567..3940)
                     /locus_tag="RHX79_004499"
     CDS             complement(2567..3940)
                     /locus_tag="RHX79_004499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001137359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraH"
                     /protein_id="HDV2199580.1"
                     /translation="MLRIKPLFILCAALLTVTPAASADVNSDMNQFFNKLGFASNTTQ
                     PGVWQGQAAGYAYGGSLYARTQVKNVQLISMTLPDINAGCGGIDAYLGSFSFINGEQL
                     QRFVKQIMSNAAGYFFDLALQTTVPEIKTAKDFLQKMASDINSMNLSSCQAAQGIIGG
                     LFPRTQVSQQKVCQDIAGESNIFADWAASRQGCTVGGKSDSVRDKASDKDKERVTKNI
                     NIMWNALSKNRMFDGNKELKEFVMTLTGSLVFGPNGEITPLSARTTDRSIIRAMMEGG
                     TAKIYHCNDSDKCLKVVADTPVTISRDNALKSQITKLLASIQNKAVSDTPLDDKEKGF
                     ISSTTIPVFKYLVDPQMLGVSNSMIYQLTDYIGYDILLQYIQELIQQARAMVATGNYD
                     EAVIGHINDNMNDATRQIAAFQSQVQVQQDALLVVDRQMSYMRQQLSARMLSRYQNNY
                     HFGGSTL"
     gene            complement(3927..>4220)
                     /gene="trbF"
                     /locus_tag="RHX79_004500"
     CDS             complement(3927..>4220)
                     /gene="trbF"
                     /locus_tag="RHX79_004500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001700179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F-type conjugal transfer protein TrbF"
                     /protein_id="HDV2199581.1"
                     /translation="LVFLTAGIVLWTAMNIIFDACIDSWKMDQELNNSIYMWNILIYV
                     IPYALYALAVGFLVTFFLFPMYELIYGNIGIFLLKRRMRRENTLREGSNNASH"
BASE COUNT         1010 a         1145 c         1006 g         1059 t
ORIGIN      
        1 acatcattac ggatattact gtcctgcgtt ctttgctcaa taatggcctg atgtccctga
       61 tgatcagcaa taatatcctg gctgccacca cccgaaggta cgctctccat tcctttacct
      121 atatctctac gggattcacg ccaggtgtta tcaacaccag gctgtacctg ttcctgcaca
      181 aaagaccacg ccatagcccg acggcgttct gcaatctccg gcgaactggt atttgtcaga
      241 atagcttcaa catcctgcgg tgcgtttttc atcacatact gtgcaaactg ttgcgacaga
      301 tcttcactca tctgcccact catactctca gtacgggatg ccatttcagc atattcatgg
      361 ctgcgggtca tattcgtcgt gtactggtcg taactctgtt tcgctgaatt cagggctgca
      421 gacaactgat ccacacggga atcagcatta ttgtcagtat ggctgccgga ttcactgact
      481 ttgcggctgg taaagtaatc gctggcttct ttaaagtctt gtgtagctct ggcatcgata
      541 tcatgacgag catcatggct ggcccgtgaa ccactactgg cttcatgtga gtcaagatca
      601 ctgccatcaa tgcttgcctt agctccggcc tggagaccaa cccctccacc gttacccaat
      661 acacttatgc ctaaatgccc tttagcataa gcatcaccgt aaaggccaag cgacgcattt
      721 gtacttctcg aggccagttc tctcgtcgcc tgctcattac tgatattatg cgccttcgca
      781 tagctttcca ctgcactgcg catacggctg gccatcatgg agtcctgagc actcatcgtg
      841 ctgtcagcac caccagtgac agagtcactg ctcccccggt tagagccaaa ctgactgagt
      901 gtgttccagg cactggcaat actgctgctg aaaccatgca gggcactttc ggctctgttc
      961 gacgcctccc gggccatttc ctgttgtgcc gctgcaatct gacgcgttgc attgataccg
     1021 accggtaacc gggacatcgc tccgcttgca tccatcacca tattaccgtc acgggtctgt
     1081 gtggcggttg cgccactgcc ggtctggtac atcatctgac caaacgacgt ggtgctgttg
     1141 gtgctccagc tgaagccgtt cacgttttcc gtctgcatgt tgccgtagga gtaattaccg
     1201 tcaaccacac tgcctgctgc actggccgtt ggactgatag atgaagaggc gaagtggctg
     1261 tacacgctgg aaaaacctgc gccaaggcct tttaccatca tccatgacaa cggggggatc
     1321 atggctgaaa gatacccggc agtggaggcc aggtcagagt atttcagctg tatctgagag
     1381 agttcagaca acacgaccgg cgcaccattc tgtttcgcat agaatgtcat ggcactgttc
     1441 agaatggcat acaacaacgg ccaggtctgc agccacatca gggcaaacac ataccccttt
     1501 aatacagaca atgtcagctt gttaaagaca gccgccagta tcaggagcgg gaatatacca
     1561 atggcaatcc ccgtcaggat agtctggacc atcggcaggt ttcgcatagt tacatgacca
     1621 atggagacat gtgccagacg ttgtttctcc atcgatgacg tggtggccag acttaccagg
     1681 ctggcggtgt caccgttacg ggctgcatta ctggtgatac cctctttcag ggcattcatg
     1741 gtgacgttct ggcgcataat ctggctggca gactgactgg agccgtagaa ataactgtaa
     1801 ctgtcactga ccagttgtct gaataacagg tccgggtccg gtctgccgcc aaatatctgc
     1861 tgcacataat aatgccaggt cttgcctccc gtctttgtat cgagattcag cctgtctttc
     1921 agcgtgaccg acgcatcctt acaagttatg aaattattat tgttgtcata aacgccccgt
     1981 agcgggctgg ggcgggaaaa aatcagcgtg taggggtcag cggaggccat caggtcttcc
     2041 agcgtgtatt tatgattcag gtaaatatca cccagcacgc agttctggac gtagtcctgg
     2101 aacagattga tgatttccgg attccgggac aggaaatcgg tgcttttcac aatcagattc
     2161 gccccgaaca gcatccccgt tttgctgtag gtgacgctgt ccggttgcgt gaagatcatc
     2221 tcgtaactgg ccaccattgc atgcccgata cgggtcgtca gtgaaagtgg catcgccaga
     2281 ccgaccggca cattatccac ccggtgaact ttgaccaggt cactgttatc aataatctgc
     2341 accgatgtgc ggacattaac cagcaggctg ataagcacaa acacggccac ccagcccagc
     2401 aaatccatca cgttgtgccg ctgtacccac attacggcca ccgcgagaac agacaatgtg
     2461 agcgcaattt tttcaatgga atcccacgtc caggttccca taaaggcggc aatggcgttc
     2521 aggttattcc gcaaccactc accaccggca atcacataaa cttcattcac agcgtgctcc
     2581 ctccgaagtg atagttgttc tggtaacgac tgagcatgcg ggcggaaagc tgctgacgca
     2641 tgtagctcat ctgacgatcg acaaccagca gcgcatcctg ctgtacctgc acctgtgact
     2701 gaaacgccgc aatctgccgg gtggcatcat tcatgttgtc gttaatatgc ccgataaccg
     2761 cttcgtcata atttcccgtg gccaccatcg cccgggcctg ctgtatcagc tcctgaatgt
     2821 actgcagcag gatgtcgtaa ccgatatagt ccgtcagctg gtaaatcata ctgttggaaa
     2881 caccgagcat ctgcgggtca accaggtatt tgaagacggg gatggtggta ctggaaataa
     2941 agcctttttc cttgtcatcc agaggcgtgt cactgacagc cttgttctga atgctggcca
     3001 gaagtttagt aatctgagac ttcagtgcat tatcccggct gatggtcacc ggtgtgtctg
     3061 ccaccacttt caggcattta tcagaatcgt tgcagtgata aatttttgct gtgccgcctt
     3121 ccatcatggc ccggataatt gagcggtcag tggttctggc tgacagcggt gtgatttcgc
     3181 cgttgggacc aaacaccagt gagccggtca gcgtcatcac aaactctttc agctctttgt
     3241 tgccgtcaaa cattctgttt ttggaaagcg cattccacat gatgttaatg tttttggtca
     3301 cccgctcctt atccttgtcg ctggctttat ccctgacgct gtcagattta ccgccaacgg
     3361 tacatccctg ccgggaagcc gcccagtcag caaaaatatt gctctcaccg gcaatgtcct
     3421 gacagacttt ttgctgggac acctgcgtcc gggggaaaag cccgccgata atcccctgcg
     3481 ccgcctggca ggaactgagg ttcatgctgt taatgtcgct tgccattttc tgcaggaagt
     3541 cttttgcggt tttgatttcc ggcaccgttg tctgcagggc aaggtcaaaa aagtaaccgg
     3601 cagcattact cataatctgc ttaacaaaac gctgcagctg ctcaccatta ataaaactga
     3661 acgaaccgag ataagcgtcg atgccgccac atccggcatt gatatccggc agcgtcatgg
     3721 aaatcagctg aacatttttg acctgagtac gggcatacag ggagccgccg taagcatagc
     3781 cggcagcctg cccctgccag acgcccggct gtgtggtatt ggaggcgaag cccagcttgt
     3841 taaagaactg attcatgtcg ctgttcacat ccgctgacgc tgcaggcgtc accgtcagta
     3901 aggcggcaca aagaataaaa agaggcttaa tgcgaagcat tattgctgcc ctcccttaat
     3961 gtgttctccc ggcgcatacg gcgtttcaac aggaatatcc cgatatttcc gtatattaat
     4021 tcgtacattg ggaacagaaa aaatgtaaca agaaacccga ctgcaagcgc atataacgca
     4081 tacggaatga catatatcag gatattccac atataaatcg aattatttaa ttcttggtcc
     4141 attttccacg aatcaataca ggcatcaaaa ataatattca tagctgtcca taaaacaatt
     4201 ccggcagtca gaaataccag
//
LOCUS       DAPGWB010000254         4209 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.256, whole genome shotgun sequence.
ACCESSION   DAPGWB010000254 DAPGWB010000000
VERSION     DAPGWB010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4209
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.256"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(36..2012)
                     /gene="speA"
                     /locus_tag="RHX79_004501"
     CDS             complement(36..2012)
                     /gene="speA"
                     /locus_tag="RHX79_004501"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HDV2199582.1"
                     /translation="MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWW
                     GNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRS
                     INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLA
                     HAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPR
                     LGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQ
                     MANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNE
                     YANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVPTAPAE
                     DAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERAWAEQ
                     LYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVL
                     PLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
                     AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQF
                     RDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE"
     gene            complement(2021..2152)
                     /gene="yqgB"
                     /locus_tag="RHX79_004502"
     CDS             complement(2021..2152)
                     /gene="yqgB"
                     /locus_tag="RHX79_004502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417414.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response protein YqgB"
                     /protein_id="HDV2199583.1"
                     /translation="MKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII"
     gene            2288..2503
                     /locus_tag="RHX79_004503"
     CDS             2288..2503
                     /locus_tag="RHX79_004503"
                     /inference="COORDINATES: protein motif:HMM:NF037550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199584.1"
                     /translation="MGITSAGMQSRDAECGERIFTRTVRQVKQQTTVHYFVSPPRPPV
                     KTNPQAKTLISTRLEVATRKKRRVLFI"
     gene            2807..3961
                     /gene="metK"
                     /locus_tag="RHX79_004504"
     CDS             2807..3961
                     /gene="metK"
                     /locus_tag="RHX79_004504"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDV2199585.1"
                     /translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACET
                     YVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPD
                     INQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW
                     LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLT
                     SATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFF
                     DLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK"
BASE COUNT         1073 a         1142 c         1009 g          985 t
ORIGIN      
        1 gtaaataaat cgacccgcca gcagaataat cttaattatt catcttcaag ataggtataa
       61 ccgtacaaac ctgcctcgaa ctcttcaagg aactgttgtt gcagttcagc atcaagatcg
      121 gttttcttca cttgatcacg gaactgagtt aacagcgttt tcggatcgag ctgtacatat
      181 tgcagcatgt ccgccacggt atcgccttcg tcagacagtt ccacttcgac actaccgtca
      241 gggaacacga acacgtcaac cgcttcggta tcaccgaaca ggttgtgcat gttgccgagg
      301 atctcctgat atgcgccgac cataaagaaa ccgagcatcg gcggattctc tggatcgtac
      361 tccggcatag gcattgtcgt ggcaataccg tcaccatcaa tatagtggtc gatagcaccg
      421 tcagagtcac aggtaatatc cagcagcaca gcgcggcgtt ccggcacttg atccagccct
      481 tccagcggca gaaccgggaa caactggtcg atcccccacg catccggcat cgactggaac
      541 agcgagaagt tgacgtacat tttgtccgcc atacgttcct gcagctcgtc gataatcgga
      601 cgatgagcac ggttttgcgg atccagctgc ttttgcactt catggcacat gctcaaataa
      661 agctgctcag cccatgcgcg ttcttgcagg ctaaaggtgc cggaagagta gccgatatga
      721 atgtcgtgca gatccatctg actgtcgtgt aaccattcac gcagagaacg gcgagttccc
      781 ggttcgtgca tctcctgcca ggtttcccac atgctttgca gcgcacgcgg cgcatcttct
      841 gcaggcgcgg tcggcaccgt gtattcgtta cgttccacgc cgatgatatt agacaccagc
      901 acggtgtgat gcgcagtcac tgcacgaccc gattcagtga ttaccgtcgg atgtggcaga
      961 ccgttttctt cacatgcatc accaatcgcc cagatgatgt tgttggcata ttcattgagg
     1021 ccgtagttca ccgaacagtc ggactgcgaa cgagtacctt cataatccac gcccagaccg
     1081 ccgccgacgt cgaagcactg aatattgacg cccagcttgt gcagttccac atagaaacgc
     1141 gccgattcac gaacgcccgt ggcgatatcg cgaatattcg ccatctgcga accgaggtgg
     1201 aagtgcagta gttgcaggct gtcgagacgc ccggcttcac gcagggtttc aaccagttgc
     1261 agtacctgag tcgcagccag gccgaacttc gatttttccc cgccggagga ctgccattta
     1321 cccgagccct gcgaagccag acgtgcacgc acgcccagac gaggaacgac attcagacgt
     1381 tctgcttcat ccagcacaat ggcgatttct gacatcttct caatgaccag atagaccttg
     1441 tggcccatct tctcgccaat taatgccagg cggatatatt cgcggtcttt ataaccgttg
     1501 cagacgatga cgctacgggt catgccagca tgcgccagca ccgccatcaa ctctgctttc
     1561 gagcctgctt ccagccccaa cggttcgcca gaatgaatca gggactcaat cacgcggcgg
     1621 tgctggttaa ctttgatcgg ataaacaagg aagtaatcgc cgttatagcc gtaggattcc
     1681 cgcgcacgtt tgaacgcggc gttaatggaa cgcaaacggt gctgcaggat ctgtgggaaa
     1741 cagaacagtg caggcagacg ctgaccctgt gcttcacgag ttttcactaa ctgcgcgaga
     1801 tcgacgcgag cttccgggac gtccgggtcc gggcacacgc tgatgtggcc cagctcgtta
     1861 acgtcatagt agttattgcc ccaccaggca atattgtaag tacgcagcat cttgctggct
     1921 tcctgggagc tcattgcaac ctcctgcatg gagcgtagta caccgtgttc gcccgctgac
     1981 gaaggcaaac ccatagacat gtcgtcagac atagcgaacc tcaaattatt ttattaagtg
     2041 taaaacagtt aacgactatc gcagcctgga actgcgataa caacccataa gcacatggat
     2101 tttccagcag tgaatgctga cgctccaact gcgcaaccgg tttctttttc ataacattat
     2161 taagcacata accgaacgta agtgtgacag ttcggcgaaa ccacgagaaa actcttgttt
     2221 ttacaagagc gcccttgttc agtcctcagt aactgtaacc agctcttgaa tcctgagaag
     2281 cgccgagatg ggtataacat cggcaggtat gcaaagcaga gatgcagagt gcggggaacg
     2341 aatcttcacc agaacggtga gacaggttaa gcagcagaca acggttcatt atttcgtatc
     2401 acctccacgg ccgcctgtta agacgaaccc acaagccaaa actctgattt caacccggct
     2461 ggaagtggca acacgaaaga aacgtcgtgt gctttttatt taagccgcgc gccgcgtttt
     2521 ataccccaca atggcagaaa attgcaaaag ataaatacgc agaatgccgg cattgtcagg
     2581 aaaaatttcc agccacgttt ttaacagaat gagacacgat tcaaaaaaaa gtggaaatcg
     2641 ggtgaagaat tgacctaaaa tagccatcca gatgttaatc catccatacc gattaacact
     2701 cagactgcca gtgtttttaa cttgcagagt cgtggtagga tccgctacca cagaaaatcc
     2761 acacaacagt ttgagctaac caaattctct ttaggtgata ttaaatatgg caaaacacct
     2821 ttttacgtcc gagtccgtct ctgaagggca tcctgacaaa attgctgacc aaatctctga
     2881 tgccgtttta gacgcgatcc tcgaacagga tccgaaagca cgcgttgctt gcgaaaccta
     2941 cgtaaaaacc ggcatggttt tagttggcgg cgaaatcacc accagcgcct gggtagacat
     3001 cgaagagatc acccgtaaca ccgttcgcga aattggctat gtgcattccg acatgggctt
     3061 tgacgctaac tcctgtgcgg ttctgagcgc tatcggcaaa cagtctcctg acatcaacca
     3121 gggcgttgac cgtgccgatc cgctggaaca gggcgcgggt gaccagggtc tgatgtttgg
     3181 ctacgcaact aatgaaaccg acgtgctgat gccagcacct atcacctatg cacaccgtct
     3241 ggtacagcgt caggctgaag tgcgtaaaaa cggcactctg ccgtggctgc gcccggacgc
     3301 gaaaagccag gtgactttcc agtatgacga cggcaaaatc gttggtatcg atgctgtcgt
     3361 gctttccact cagcactctg aagagatcga ccagaaatcg ctgcaagaag cggtaatgga
     3421 agagatcatc aagccgattc tgcccgctga atggctgact tctgccacca aattcttcat
     3481 caacccgacc ggtcgttttg ttatcggtgg cccgatgggt gactgcggtc tgactggtcg
     3541 taaaattatc gttgatacct acggcggcat ggcacgtcac ggtggcggag cattctctgg
     3601 taaagatcca tcaaaagtgg accgttccgc tgcgtacgca gcacgttatg ttgcaaaaaa
     3661 catcgttgct gctggcctgg ccgatcgttg tgaaattcag gtttcctacg caatcggcgt
     3721 ggctgaaccg acctccatca tggtagaaac tttcggtacc gagaaagtgc cttctgaaca
     3781 actgactctg ctggtacgtg agttcttcga cctgcgccca tacggtctga ttcagatgct
     3841 ggatctgctg cacccgatct acaaagaaac cgcagcatac ggtcactttg gtcgtgaaca
     3901 tttcccgtgg gaaaaaaccg acaaagcgca gctgctgcgc gatgctgccg gtctgaagta
     3961 atctttcttc acctgctttc aaaggccagc ctcgcgctgg cctttttctt ttacctcacc
     4021 gcggtggata ggcattcacg ccgcatccgg caaaaagctg cccgcacaat aacatcattc
     4081 ttcctcaaca cgttttatcg caaattatca tcactactga aaccgattac accaataaca
     4141 ccagccaaat atttgtaata ttttcatatt attattcagt tttcacagtt gttacatttc
     4201 ttttcagta
//
LOCUS       DAPGWB010000255         4049 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.258, whole genome shotgun sequence.
ACCESSION   DAPGWB010000255 DAPGWB010000000
VERSION     DAPGWB010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4049
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.258"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..632
                     /gene="cdtB"
                     /locus_tag="RHX79_004505"
     CDS             <1..632
                     /gene="cdtB"
                     /locus_tag="RHX79_004505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000759934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytolethal distending toxin type III/V nuclease
                     subunit CdtB"
                     /protein_id="HDV2199586.1"
                     /translation="QEAGSPPSTAVDTGRVIPSPGIPVRELIWNLSTNSRPQQVYIYF
                     SAVDAFGGRVNLALVSNRQADEVFVLRPVRQGGRPLLGIRIGNDAFFTAHAIATRNND
                     APALVEEVYSFFRDSRDPVHQAINWMILGDFNREPDDLEVNLTVPVRNASEIIFPAAP
                     TQTSQRTLDYAVAGNAVAFRPFPLQAGIVYGARRTQMSSDHYPVGVSRR"
     gene            647..1192
                     /gene="cdtC"
                     /locus_tag="RHX79_004506"
     CDS             647..1192
                     /gene="cdtC"
                     /locus_tag="RHX79_004506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000825549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin type III subunit
                     CdtC"
                     /protein_id="HDV2199587.1"
                     /translation="MKRLIIIVTMLLIAGCSSSQEAVNNQIDELGKENNSLFTFRNLQ
                     SGLMLHNRLDLHGREITGWEVVPVKTPAEALVTDQSGWIMIRTPNTDQCLGTPDGKNL
                     LKMTCNPTDKKTLFSLIPSTTGAVQFKSVLSGLCFLDSKNSGLSFETGKCITDLKQPF
                     KVVPQSHLWMLNPLNTESPVI"
     gene            1302..1472
                     /locus_tag="RHX79_004507"
                     /pseudo
     CDS             1302..1472
                     /locus_tag="RHX79_004507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000878026.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            1491..1679
                     /locus_tag="RHX79_004508"
                     /pseudo
     CDS             1491..1679
                     /locus_tag="RHX79_004508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000194582.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1788..3325)
                     /locus_tag="RHX79_004509"
                     /pseudo
     CDS             complement(1788..3325)
                     /locus_tag="RHX79_004509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998048.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISEc8 family transposase"
     gene            complement(3375..3722)
                     /gene="tnpB"
                     /locus_tag="RHX79_004510"
     CDS             complement(3375..3722)
                     /gene="tnpB"
                     /locus_tag="RHX79_004510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019104956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HDV2199588.1"
                     /translation="MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTELKDDPMSGHVF
                     IFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWSSARDGKVFLTQAQLAMLLEGIDW
                     RQPKRLLTSLTML"
     gene            complement(3719..>4049)
                     /locus_tag="RHX79_004511"
     CDS             complement(3719..>4049)
                     /locus_tag="RHX79_004511"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV2199589.1"
                     /translation="PEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKL
                     LLPSSESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTL
                     LIQELKR"
BASE COUNT          959 a         1072 c         1060 g          958 t
ORIGIN      
        1 tgcaggaggc aggttctccg ccatcaacgg ctgtagatac aggtagagtt attccttccc
       61 caggcattcc tgtccgggag cttatctgga acttgtctac aaatagcaga ccacagcaag
      121 tatatatata tttttctgct gttgatgcct ttggtggaag ggtcaatctt gctctggtta
      181 gcaatcggca ggccgatgaa gtgtttgttc ttcgcccggt aaggcaaggt gggcggccat
      241 tgcttggcat acggattggc aatgatgcat ttttcactgc acatgcgata gctacgcgaa
      301 acaatgacgc tcccgctctt gttgaagaag tctatagctt ctttcgtgac agccgagacc
      361 cagtccacca ggccattaac tggatgattc ttggtgattt taatcgcgaa cctgatgatt
      421 tagaggtgaa ccttacagtt cctgtaagaa atgcatcaga aattattttc cctgctgcac
      481 cgacacaaac gagtcaacga acattagatt atgcagtagc aggaaacgct gtggccttta
      541 gaccatttcc gctacaagca ggaattgtat acggagccag aaggactcag atgtcttcag
      601 accattaccc tgttggcgtt tccagacgat aaaagaggct atcataatga agagattaat
      661 aattattgta actatgttgc taatagccgg atgctcctca tcacaggaag cagtcaataa
      721 tcagatagat gagttaggaa aagaaaataa ctctctattc acattccgca atctccaaag
      781 tggcctgatg ctccataaca gactagatct gcatggcaga gaaatcactg gatgggaagt
      841 tgtaccagta aaaacaccag ctgaagctct tgttaccgat caaagcgggt ggataatgat
      901 tcgaacccca aatacagacc aatgtttagg gactcctgat ggaaaaaatc tgctaaaaat
      961 gacgtgtaat ccgacagata agaaaactct gttttctctc ataccgtcaa caacaggagc
     1021 agtacagttc aaaagtgttc tgtctggatt atgtttcttg gatagtaaaa atagcggatt
     1081 aagttttgaa acgggaaaat gcattactga cctcaaacaa ccatttaaag tagtcccaca
     1141 gagccatttg tggatgttga atccattaaa tacagaatct cctgttattt aatccccgca
     1201 tatgcccggt atttctccgg gcatataaca atatatgact atattttcat ggaaggagat
     1261 cacccaataa cgattcggtg atttccttcc atgaaaatac gcaactaggt aaggaaatcg
     1321 ctgttaaaac agaagaacag ctgtcagtta ttgttctaca ccgaacccac tgacaactgg
     1381 tgaagttcag aaccgcgcag attaatgccc tgcactgtgc gttgttggag tccggtgaaa
     1441 ccatccacaa aggtcgggca gcgatggagc aggcaacggg ccaaacctgc tgccgtcgct
     1501 tggaggatgc cggctggctt cgaaccctgc gtgcgccaga tctgcggctg accgtggagc
     1561 tgacagaggc ctgacgggcc gtggcacagc ctccgctgca ggctgaacag gaacgcctcc
     1621 gtacagaaca gcgcgcggcg gaagtcgtcg ttctgccgca ggtcccggta tcagggtaag
     1681 cgtcaatacg gtgctccgtt gacgcttacc atggaacgta gttttcaccg ataaataagt
     1741 gtcaatacgg gtaagcgtac agcgagggcc gtattgacgg ggatgtgtta ttcagctggc
     1801 agtgctatgc gccacggaag cagttcgctg acccggttga ccggccagtc tgctatgacg
     1861 ccaagcacat ggcgaaggta gctttctgga tccacgtcat tcagtttgca cgtcccgatc
     1921 aggctgtaca gtagcgctcc ccgctcacca ccatggtcag agccgaagaa caggaagttt
     1981 ttacgaccca gactgaccgc ccgcagggca ttttcagcga tgttgttgtc gatttccacc
     2041 cagccatcgt tcgcatagta cgtcagtgcc ggccactggt taagtgcgta cgcgaacgcc
     2101 ttcgccaact ctgagtgtcg cgacagggtc ttcatctttt cacgcaacca gctttccagg
     2161 gatttcaaca gcggtttcgt ttttcgctga cgttcagcaa gccgctgctc tgccggcatt
     2221 ccccttatat ccgcctctat ggcgtacaac tgaccgatct gctccagggc ttcttccgtc
     2281 agtgctgacg ggatgcggac gtgcacatcg tggatctttc ggcgggcatg agcccagcag
     2341 gcagcttccg ttatcccacc attgcgatac agctcgttga acccggcgta cgcatccgct
     2401 tgcagcacac cgctgaagca agcaagatga gtctgcggat ggatgccttt tctgtccggg
     2461 ctgtaagcga acctcactgc aggtgccaac gctgacccgg cattgcggtc atcacgaaca
     2521 tacgcccaca accgcccggt cttcgtcttc ttattacccg gcagcagtac ctggaccggg
     2581 gtatcatcgg catggagttt gccgtcagtc atgacatagc catgaagcgc ctcttccagc
     2641 ggagacagca gccggcagca tgcatccacc cagcccgaca gcagtgaacg cctcagctcc
     2701 acaccttgcc ggccgtatat ttctgactgg cgatacagcg gggtgtgctc tgcatacttc
     2761 gaggtcagca cgcgggccag cagccccggt ccggcgatac cccgctcgat gggccgcgaa
     2821 ggtgcaggtg cctgcacgat ggcatcgcgc tgagtacagg catgttttcc cgtaccgtcc
     2881 ggataacccg gaaggcgcta cgcatcaact ccagctgttc ggcggtatcc tcgcccagat
     2941 agctcagtga accgccgcag ttcgggcagc acggcgccgc aggctacagt cgcttttcgt
     3001 cacggggtag tgattcaggg aacggcttac gggtgcgggt ctgacgcaac ggacgctgta
     3061 ctgccgggtc atacacccta ccagtcagcg tatcgctctc tttctgaagc cggttcagat
     3121 cggcttccat ttgtgcgata cggcgggaga ctttttcgga acgactgccg aagttcatcc
     3181 ggcggagttt atccagctgc gcctgcagat ggtctatttc gcgctcccgg ttgctcagct
     3241 tttcctgcag ggcgtggatc agcgcttcct gttcggccag gcgctgtttc agcaggaaga
     3301 tgtcgtcaga agaaatgtcg ttcataagcc tgtattttac cgggcttatt ctgtaacaac
     3361 caggataaag agatttacag catggtcagg gaggtcagca gccgcttagg ctgtcgccag
     3421 tcgatacctt ccagcagcat cgccagctgc gcctgcgtaa ggaacacttt gccatcacgg
     3481 gctgacgacc aggcgaagcg cccacgctcc agccgtttgg tcaggaggca cagtccgtca
     3541 ccggtggacc acagcagttt aacctgactg ccgctgcggc cccggaaaat gaaaacatgg
     3601 ccggacatgg gatcgtcttt cagctccgtt tgtactttcg cagccaggcc gttgaagcca
     3661 tttctcatat cggtgatacc ggcaaccagc caaattttgg tcccggaagg taacgggatc
     3721 atcgcttcag ttcctgtatc agcagagtca ggagcttttc gctgacattg ccattgaagc
     3781 ggagcgtccc gtgccggaac gttacctcac agctgatact gagggtttcc gggtcctctg
     3841 cgagcgattc tggctgttcg gcagctgcat cgagagtcac aggaagtagc tgggggctct
     3901 ctgaagaagg taatagcagc tttccctcgc gccattgttg tcgccatttg aacaacagat
     3961 tggcgttaat gccattttca agagcaagtt ttgagatgga tatcccgggt tcacaggagg
     4021 cagcaacgag ctgctgttta aattcggga
//
LOCUS       DAPGWB010000256         3988 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.259, whole genome shotgun sequence.
ACCESSION   DAPGWB010000256 DAPGWB010000000
VERSION     DAPGWB010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.259"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..3863
                     /locus_tag="RHX79_004512"
     CDS             <1..3863
                     /locus_tag="RHX79_004512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001521871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HDV2199590.1"
                     /translation="FHRAAKGDVAGAVTGVTDGAGRRFHLALTTQAQRAEAFRKQRAS
                     SLSSPASPRSVSSSQVFPDTLPAGTEYGADNGIRLEAVWLTHDPAYPDEQPTAPLARY
                     TYTAGGELRAVYDRSGMQVRGFTYDAEHAGRMVAHHYAGRPESCYRYDDTGRVTEQVN
                     PEGLDYRFEYGESRVIITDSLNRREVLYTEGEGGLKRVVKKEHADGSITRSEYDEAGR
                     LKAQTDAAGRRTEYRLHMASGAVTAVTGPDGRTVRYGYNSQRQVTSVTYPDGLRSSRE
                     YDERGRLTAETSRSGETTRYSYDDPASELPTGIQDATGSTKQMAWSRYGQLLAFTDCS
                     GYTTRYEYDRYGQQIAVHREEGISTYSSYNPRGQMVSQKDAQGRETRYEYSAAGDLTA
                     TVSPDGKRSTIEYDKRGRPVSVTEGGLTRSMGYDAAGRITVLTNENGSQSTFRYDPVD
                     RLTEQRGFDGRTQRYQYDLTGKLTQSEDEGLITLWHYDASDRITHRTVNGDPAEQWQY
                     DEHGWLTTLSHTCEGHRVSVHYGYDDKGRLTGERQTVENPETGEMLWEHETGHAYSEQ
                     GLATRQEPDGLPPVEWLTYGSGYLAGMKLGGTPLVEYTRDRLHRETARSFGGAGSTAG
                     YEQATAYTLTGQLQSRHLNLPQLDRDYTWNDNGQLVRISGPQECREYRYSGTGRLTGV
                     HTTAANLDIDIPYATDPAGNRLPDPELHPDSTLTAWPDNRIAEDAHYVYRYDEYGRLA
                     EKTDRIPEGVIRMHDERTHHYHYDSQHRLVFYTRIQHGEPQVESRYLYDPLGRRTGKR
                     VWRRERDLTGWMSLSRKPEETWYGWDGDRLTTVQTDTTRIQTVYQPGSFAPLIRIETD
                     NGEREKAQCRSLAEKIQQEGSEDGHGVVFPAELVGLLDRLEGEIRANCVSSESRQWLA
                     QCGLTVERLAAQIEPVYLPERKIHLYHCDHRGLPQALISPEGETAWCGEYDEWGNLLG
                     ETSAQHLQQSLRLPGQQYDEESGLYYNRNRYYDPLQGRYITQDPIGLKGGWNLYAYPL
                     NPVQRGDPLGLSGETLVLGSATTVTGTKFGGALLSGGAATFDAVTTAMASAAPALGAM
                     AVVAGPMGYDLLANDGRAGKALSDGQLINSQAEMCYWTSSCPLDSPHENDNSSGSQPN
                     VGKDLTDEEKNCLAGGSTGSPGGWGPEDENSARDRMQHERYKDELRQKMGKPDVTDSN
                     LKNIIDDLYRPNAKVGSGSTADAVRYELATGEKVGGRGHVLKAQDYTRALQDWLDKNP
                     TASPGDRAAAENVLQDLQNALGGK"
BASE COUNT          924 a         1008 c         1380 g          676 t
ORIGIN      
        1 cctttcaccg ggcagctaag ggtgacgtgg cgggcgcggt gacgggggtg acggacggcg
       61 cgggccgccg ttttcacctg gcgctgacca cgcaggcgca gcgggcggaa gccttccgta
      121 aacagcgcgc ctcttcctta tcttccccgg ccagtccccg ttctgtttcc tcttctcagg
      181 ttttccccga cacgctgccc gccggtacag agtacggtgc cgataacggt atccggctgg
      241 aggcggtatg gctgacacac gacccggcat acccggatga acagccgact gcgccgctgg
      301 cgcgctacac gtacacggcc ggtggtgaac tgcgggcggt gtatgaccgc agcgggatgc
      361 aggtgcgcgg gtttacttat gatgcggagc acgccgggcg gatggtggcg caccattatg
      421 cggggaggcc ggagagctgc taccggtatg atgataccgg tcgggtgacg gagcaggtca
      481 acccggaggg gctggactac cgctttgagt acggagagag ccgggtaatc atcacggaca
      541 gcctgaaccg gcgggaggtg ctgtacacgg aaggcgaggg tggcctgaag cgggtggtga
      601 agaaggagca tgccgacggg agcatcaccc gcagcgagta tgatgaggcg gggaggctga
      661 aggcgcagac ggatgcggcg gggcggcgga cggagtaccg gctgcatatg gcgtcgggcg
      721 cggtgacagc ggtgacgggg ccggacggca ggacggtgcg gtatggctat aacagccagc
      781 ggcaggtgac gtcagtgacg tacccggacg ggcttcgcag cagccgggag tatgatgaga
      841 ggggaaggct gacggcggag acctcgcgca gcggtgagac aacgcggtac agctatgatg
      901 acccggcgag tgagctgccg acagggatac aggacgcgac gggcagtaca aaacagatgg
      961 catggagccg ttacggtcaa ctgctggcct ttacggactg ctcggggtac acgacgcggt
     1021 atgagtacga ccggtacggt caacaaatcg ccgttcaccg ggaagaaggc atcagcactt
     1081 acagcagtta taacccgcgt gggcaaatgg tcagtcagaa ggatgcgcag gggcgtgaaa
     1141 cccgttatga gtacagcgcc gcaggagacc tgacagcaac ggtatcaccg gacggtaaac
     1201 gcagcaccat cgaatatgat aaacgcgggc gtccggtgag tgtgacggaa ggcggtctta
     1261 cgcgcagcat ggggtatgac gctgccgggc gcatcaccgt gctgaccaac gagaacggca
     1321 gccagtccac gttccggtat gacccggtcg acaggctgac ggagcagcgc ggctttgacg
     1381 gccggacgca acgttaccag tatgacctga ccggaaaact cacgcagagt gaagatgagg
     1441 ggcttatcac cctctggcat tacgatgcgt cggaccgtat cacgcaccgg acggtgaacg
     1501 gcgacccggc agagcagtgg cagtatgatg agcacgggtg gttaaccacc ctcagccata
     1561 cctgtgaagg ccaccgcgtg tcggtccact acggctatga cgataaaggc cgcctgacgg
     1621 gtgaacggca gacggtggag aacccggaga caggggagat gctgtgggag catgagacgg
     1681 ggcatgcgta cagcgaacag gggctggcga cccgtcagga gccggacggt ctgccgccgg
     1741 tggagtggct gacgtatggc agcggttatc ttgcggggat gaagctgggc ggaacgccgc
     1801 tggtcgagta cacgcgggac cggctgcacc gcgagacggc ccgtagcttc ggcggggcgg
     1861 gcagtacagc ggggtacgaa caggccacgg cgtacaccct cacagggcag ctacagagca
     1921 ggcacctgaa ccttccgcag cttgaccgtg actatacgtg gaacgataac ggacaactgg
     1981 tgcgcatcag cggcccgcag gagtgccggg agtaccgtta cagcggcacg ggaaggctga
     2041 cgggcgtcca cactacggca gcgaacctgg atatcgatat cccgtatgcg acggacccgg
     2101 caggaaaccg gctgccggac ccggaactgc acccggacag caccctcacg gcatggccgg
     2161 ataaccgcat cgcggaagat gcgcactatg tctaccgcta cgatgaatac ggcaggctgg
     2221 cggagaagac ggaccgcatc ccggaagggg tgatacggat gcacgacgag cggacccacc
     2281 actaccacta cgacagccag caccgtctgg tgttctacac gcggatacag cacggtgagc
     2341 cgcaggtgga gagccgctac ctctatgacc cgctgggccg ccggacggga aaacgggtgt
     2401 ggcggcggga gcgtgacctg acggggtgga tgtcgctgtc gcgtaaaccg gaggagacct
     2461 ggtacggctg ggacggcgac aggctgacga cggtacagac cgacaccacg cgtatccaga
     2521 cggtatacca gccggggagc ttcgcgccgc tcatccgcat cgaaacagac aacggtgaac
     2581 gggagaaagc gcagtgccgc agcctggcgg agaagataca gcaggaaggg agcgaagacg
     2641 gtcacggtgt ggtgttcccg gctgaactgg tggggctgct ggacaggctg gagggggaaa
     2701 tccgggcaaa ctgcgtgagc agtgaaagcc gccagtggct tgcgcagtgc gggctgacgg
     2761 tggagcggct ggcggcacag atagagccgg tttatttgcc tgagcgaaaa atacatcttt
     2821 accactgtga ccaccgggga ctgccgcagg cgcttatcag cccggaaggg gaaacggcgt
     2881 ggtgcgggga gtatgacgaa tggggaaacc tgctgggcga aaccagtgcg cagcaccttc
     2941 aacagtcact ccgtctgccg gggcagcagt atgatgagga gtcggggctg tactataacc
     3001 ggaaccggta ctacgatccg ttgcagggac gctatatcac ccaggatccc attgggctga
     3061 aggggggatg gaacctgtat gcgtatccgc tgaacccggt gcagcggggg gatcctcttg
     3121 ggttgtctgg tgagacactg gttcttggtt ctgccacaac agtaacagga acaaaatttg
     3181 ggggggcgtt actttcgggt ggggcggcga cttttgatgc agtcacgacg gctatggcgt
     3241 ctgctgcccc tgctcttgga gcaatggctg tggtcgctgg gccaatggga tatgaccttc
     3301 tcgctaatga tgggcgtgcc gggaaggctc tgagcgatgg gcagttaata aattctcagg
     3361 ctgaaatgtg ttactggacc agtagttgtc ctttagatag cccacatgag aatgataatt
     3421 cgtcagggag tcagccgaat gttgggaagg atttgacgga tgaagagaag aactgcctgg
     3481 ccggcggcag tacgggaagc ccgggaggat ggggaccaga agatgagaat agcgcaaggg
     3541 atcgtatgca gcatgaacgg tataaagatg aattgcgaca gaaaatggga aaacccgacg
     3601 ttacagattc aaatttgaaa aatattatag acgatcttta tcggccaaat gcaaaagtag
     3661 gaagtggaag cacagcagat gctgttcgtt atgaattggc cacaggtgaa aaagttggtg
     3721 gtagaggaca tgtattgaaa gcacaggatt atacaagggc tttacaggat tggttggata
     3781 agaatccaac agcatctcca ggggatcgag cagcagcaga aaacgttctt caggatttac
     3841 agaatgcttt gggaggcaag taatgaacca atatattgct agttatatag aaaaaatggc
     3901 atcattttcc actgttttgt ctgagacagt ctcattagct aatgaatact ggcatccaga
     3961 aacgccaccg gtggttatgt tgttctct
//
LOCUS       DAPGWB010000257         3987 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.260, whole genome shotgun sequence.
ACCESSION   DAPGWB010000257 DAPGWB010000000
VERSION     DAPGWB010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3987
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.260"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(147..2477)
                     /locus_tag="RHX79_004513"
     CDS             complement(147..2477)
                     /locus_tag="RHX79_004513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HDV2199591.1"
                     /translation="MSGMKVSQAVKAARGHWAKILPALGVNILKNRHQPCPVCGGKDR
                     FRFDDQEGRGTWFCNQCGAGDGLALVTRALNVDISEAADRIHGLTHGLSVVNSEVRAL
                     TADTDSGKDAAALAARLLQASRESAGNTYLTHKGFPEHICHELTSAHKTGGVMFRPGD
                     LIVPLYNADGELVNIQLISGNGSKCFLKGGQVKEAYHLIEGGGSSLRRMWIAEGYATA
                     LTIHHLTGEAVMVAFSSVNFLSLASVAHNKYPGYQLIIAADRDLNGSGQNRAETAAKA
                     CQCDIVLPPVFGDWNDALTQYGEESTRKAILEALKPHNASPFDTMSEAEFTAMSVSEK
                     AQRVREHYRDALAVDPNGQLLSRYESGAWKVISQSDFSRDVAALFQRLGAPFSSGKIA
                     SLVETLKLIVPQQQNPARHLIGFRNGVLDTRTGLFSPHCKENWLRTLCEVDFTPPVKG
                     ETLETHAPAFWRWLDRAAGHKPAKRDIILAALFMVLANRYDWQLFLEVTGPGGSGKSI
                     LAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGG
                     DAVSVDPKYQNAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPEERDP
                     QLKDKIARELAVIVRQLMQRFSDPMSARTLLQSQQNSDEALTIKRDADPAFDFCGYLE
                     ALPDTNGMFMGNANIVPRQPRTYLYHAYLVYMEANGYKNTLSLTMFGKGLPVMLKEYG
                     LHYEKRRTNQGMQTNLTLKEESNADWLPKCDEPILK"
     gene            complement(2492..2815)
                     /locus_tag="RHX79_004514"
     CDS             complement(2492..2815)
                     /locus_tag="RHX79_004514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016809712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5375 family protein"
                     /protein_id="HDV2199592.1"
                     /translation="MKSRTLSLSLRVALYRRAVACAWLSACYQQNRHLQLTLDEIETA
                     IARELEGFYLRQHGQTKGMEIACALLSDLMESGPLMSCPALSQLGIAVMDELCVRHIK
                     KPVLH"
     gene            complement(2815..3036)
                     /locus_tag="RHX79_004515"
     CDS             complement(2815..3036)
                     /locus_tag="RHX79_004515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014882693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199593.1"
                     /translation="MNHAAISYDDIVRLKHLRNVGEFVTGMAVLQDCYEKPAGAQCEQ
                     LASLIYLMTEQLDGVVQRCQDDLMNMEVV"
     gene            complement(3036..3581)
                     /locus_tag="RHX79_004516"
     CDS             complement(3036..3581)
                     /locus_tag="RHX79_004516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000982476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HDV2199594.1"
                     /translation="MMPERINPLFSGLHPAVISRYSFPAAAKSAAGRRNPSYLLATPD
                     APCVFFYVVAQAHPFFGLRCLYLSPCQIMVVRAGQPSGWPVSNKAGIPTPVRVTTHER
                     RNSGGGIYRDLLEVALMATILAPSHPQFIFVFAAVRRAERKPRISMLRIVASNEHHAR
                     LSLVHEYVLCLAARLPVREVM"
     gene            complement(3581..3841)
                     /locus_tag="RHX79_004517"
     CDS             complement(3581..3841)
                     /locus_tag="RHX79_004517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HDV2199595.1"
                     /translation="MHDISVSAPAPAAPLFPVLNQHERFLRLPEVMHLCGLSRSTIYD
                     LISRDAFPKQIPLGGKNVAWAQSEVSAWMADRISARGRGCDA"
BASE COUNT         1021 a         1067 c          952 g          947 t
ORIGIN      
        1 gcaaaaccat gcacactatt caccctgtaa ttttttacat atatatcaat tgattatgtg
       61 ttaacagcta ggtgaagagt gaacagctat ctctacattt gtgcgtttcc aataagaaac
      121 ccggcatcag ccgggtcagt taatcgttat tttaatattg gctcatcaca cttgggcagc
      181 cagtctgcat tactctcctc tttcaaagtg aggttagttt gcattccctg attagttcgc
      241 cgtttctcat aatgtagccc gtactccttc agcatgactg gcaacccttt gccaaacatc
      301 gtaagactca gggtgttttt atagccatta gcctccatgt atacgaggta ggcatggtaa
      361 aggtaggtac gtggctggcg tgggacaata ttagcgttcc ccataaacat accgttggtg
      421 tcaggtaatg cctcaagata gccacaaaaa tcaaatgctg gatcagcatc acgcttgatg
      481 gtgagagcct catctgaatt ctgctgcgac tgaagcaatg ttctggcgct catcggatcg
      541 ctgaaacgct gcatgagctg gcgaacaatc acagccagtt ctcgagcaat tttatctttc
      601 agctgcggat cgcgttcttc cggtgctatc tgctcaggaa aatgcagaat cactctcctg
      661 cgggacacac caccactacg atcagtgaag cgcataggat tattatttac ggccaggata
      721 accgccggaa tatgtgttga ataagcattc tgatacttgg ggtccaccga taccgcatcg
      781 ccaccagtta tagccttaag cccggcgccg tcgccgctcc acttctcctg atcaggcagg
      841 cgaataagag aaaaacctat cagagccgca cgttctcgcg gggactccag cgtttcaatg
      901 gtcgcagagg tggcgttatc ctctccagca agcatggtcg caatttcagc cagaatactt
      961 ttgccacttc caccagggcc agtcacttcc agaaagagct gccagtcata gcggttcgcc
     1021 agcaccataa ataacgccgc aagaataatg tcgcgtttag ctggcttgtg tccggcagcc
     1081 cggtccagcc agcgccagaa tgccggggca tgagtttcaa gcgtttcccc ctttaccggt
     1141 ggcgtgaaat cgacttcaca cagggtacgc agccagttct ctttacagtg cggactaaaa
     1201 agccctgttc gcgtatcgag gacgccatta cgaaaaccaa tcagatgacg tgccggattt
     1261 tgctgctgcg gaacaattaa ctttaatgtt tccaccagtg aggcaatttt tcctgaggaa
     1321 aacggtgcac cgaggcgctg gaaaagggct gcgacatctc gggaaaaatc tgactgagaa
     1381 atcactttcc acgctccaga ctcgtagcgg gataaaagct gcccgttcgg atcaaccgcc
     1441 agtgcatccc tgtaatgctc ccgaaccctc tgagcttttt cgctgacact catcgctgtg
     1501 aattctgctt cactcattgt gtcgaaagga ctggcattat gtggcttcaa agcctcaaga
     1561 attgccttcc gggtggattc ctctccgtat tgggtaagcg catcattcca gtcaccaaaa
     1621 accggtggca gcacaatgtc acactgacac gcttttgcag cagtttcagc cctgttctgg
     1681 cctgaaccat tcagatcgcg gtccgctgca ataattaact gatatcccgg atacttgtta
     1741 tgggcaacgc tggccagaga aagaaagttg accgacgaaa atgccaccat gacggcttct
     1801 cctgtcagat gatgaatggt aagcgccgtg gcgtaacctt ccgcaatcca catccttctt
     1861 aaagaactcc cgcccccttc tatcagatga taggcctcct taacctgacc tcctttaaga
     1921 aaacacttgc taccattgcc actgataagc tgaatattca ccagctcccc gtcagcgtta
     1981 tagagcggga cgatcaaatc accggggcgg aacatcaccc caccggtttt atgagctgaa
     2041 gtcagctcat ggcaaatatg ctccgggaaa cctttatgtg taagataagt gtttccggca
     2101 gattcacgtg aggcttgcag cagtcgcgcg gcaagtgctg ctgcatcttt cccgctatcg
     2161 gtatcggcgg ttaacgccct gacttcggaa ttaactacag acagaccatg tgtcagtcca
     2221 tgtatcctgt cagctgcttc actgatatcc acattcagtg ccctggtgac aagcgctaaa
     2281 ccatccccgg caccgcactg attgcagaac catgttccgc gtccttcctg atcgtcgaag
     2341 cgaaaacgat ctttaccgcc acagaccggg caaggctgat ggcgattttt caatatattc
     2401 acgcccagcg ctggcagaat cttagcccag tgaccgcggg cagccttcac ggcctgactg
     2461 actttcattc ctgacatgac gcagttctcc ctcagtgtaa aaccggcttt ttgatgtgac
     2521 ggacgcataa ctcatccatt acggctattc cgagctggga gagtgcggga caggacatta
     2581 gagggccgga ttccatcagg tctgaaagca gagcgcaggc gatttccatg ccttttgttt
     2641 gcccgtgctg tcgcagataa aatccttcaa gctcacgggc aatagcggtt tcaatttcat
     2701 ccagagtgag ctgcagatgg cggttttgct gatagcaggc actcaaccag gcgcaggcta
     2761 ccgcgcggcg atacaacgct acccgaagtg aaagggaaag ggtgcgtgat ttcattacac
     2821 cacctccatg ttcatcaggt catcctggca acgctgtacc acgccatcaa gttgctctgt
     2881 catcagataa atcagggaag ccagttgctc acattgagca ccggcaggtt tttcgtagca
     2941 atcctgaaga acagccattc cggtgacaaa ctcccccacg ttacgaagat gcttcaggcg
     3001 gacaatatcg tcataagaga ttgcggcgtg attcatcaca tcacctcccg gacaggcagg
     3061 cgagcagcaa ggcaaagcac atactcatgg accagtgaaa gacgtgcatg atgctcattg
     3121 ctggcgacga tacgcagcat actgatacgt ggtttacgtt ctgcacgacg aacggcggca
     3181 aaaacaaata taaattgagg atgtgaaggg gcgaggatcg tagccataag ggcaacctcc
     3241 aataagtcgc ggtaaatgcc accaccggag ttcctacgct catgggtggt gacccgaacg
     3301 ggggtaggaa taccggcctt attggaaacc ggccagcccg aaggctgccc cgcccggacc
     3361 accattatct gacagggact aaggtataag caccgcagcc cgaaaaatgg gtgtgcctga
     3421 gcaacgacgt aaaaaaagac gcacggcgcg tctggtgtcg ccaataagta actcgggttc
     3481 ctacgcccgg cagccgattt tgcggcagcg ggaaaactat acctggaaat gactgcagga
     3541 tgcaagccag aaaaaagggg attaatgcgt tcaggcatca ttatgcatca catccccgtc
     3601 cgcgggcact tatacgatcc gccatccatg cgcttacctc tgactgtgcc caggcaacat
     3661 ttttaccacc aagcgggatc tgcttcggga aagcatcgcg gcttatcagg tcgtatatag
     3721 ttgagcggga caagccgcat aaatgcatca cctcgggaag acgtaaaaat cgctcatgct
     3781 ggttcagcac aggaaataat ggcgcagccg gagctggcgc agaaacagaa atatcatgca
     3841 tttatctacc ctctttaatt ccttcatcag tccggataaa tccccccgga ttcaggtagt
     3901 tccttattat gtatatattg ctcgcttacg cacccattat ttatttagtg tcacatattg
     3961 atttaatgga atttaaaact atatcaa
//
LOCUS       DAPGWB010000258         3945 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.261, whole genome shotgun sequence.
ACCESSION   DAPGWB010000258 DAPGWB010000000
VERSION     DAPGWB010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3945
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.261"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            48..1433
                     /gene="dcuC"
                     /locus_tag="RHX79_004518"
     CDS             48..1433
                     /gene="dcuC"
                     /locus_tag="RHX79_004518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
                     /protein_id="HDV2199596.1"
                     /translation="MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAI
                     MGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV
                     VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG
                     AAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFW
                     QRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVI
                     CMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQ
                     SLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAY
                     LTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELM
                     VPGTAAAVTGK"
     gene            complement(1474..2154)
                     /gene="dpiA"
                     /locus_tag="RHX79_004519"
                     /gene_synonym="citB"
     CDS             complement(1474..2154)
                     /gene="dpiA"
                     /locus_tag="RHX79_004519"
                     /gene_synonym="citB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component response regulator DpiA"
                     /protein_id="HDV2199597.1"
                     /translation="MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARM
                     MIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVF
                     DYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGID
                     PLTLNAVRKLFKEPGVQHTAETVAQALTISRTTARRYLEYCASRHLIIAEIVHGKVGR
                     PQRIYHSG"
     gene            complement(2123..3781)
                     /gene="dpiB"
                     /locus_tag="RHX79_004520"
     CDS             complement(2123..3781)
                     /gene="dpiB"
                     /locus_tag="RHX79_004520"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase DpiB"
                     /protein_id="HDV2199598.1"
                     /translation="MLQLNENKQFAFFQRLAFPLRIFLLILVFSIFVIAALAQYFTAS
                     FEDYLTLHVRDMAMNQAKIIASNDSVISAVKTRDYKRLATIANKLQRDTDFDYVVIGD
                     RHSIRLYHPNPEKIGYPMQFTKQGALEKGESYFITGKGSMGMAMRAKTPIFDDDGKVI
                     GVVSIGYLVSKIDSWRAEFLLPMAGVFVVLLGILMLLSWFLAAHIRRQMMGMEPKQIA
                     RVVRQQEALFSSVYEGLIAVDPHGYITAINRNARKMLGLSSPGRQWLGKPIAEVVRPA
                     DFFTEQIDEKRQDVVANFNGLSVIANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQ
                     IKQYVESLRTLRHEHLNWMSTLNGLLQMKEYDRVLAMVQGESQAQQQLIDSLREAFAD
                     RQVAGLLFGKVQRARELGLKMIIVPGSQLSQLPPGLDSTEFAAIVGNLLDNAFEASLR
                     SDEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVSTRADEPGEHGIGLY
                     LIASYVTRCGGVITLEDNDPCGTLFSIYIPKVKPNDSSINPIDR"
BASE COUNT          927 a         1014 c          933 g         1071 t
ORIGIN      
        1 taggaatttt ttattattta ctttggggcc tggagacagg aaaaattatg ctgacattca
       61 ttgaactcct tattggggtt gtggttattg tgggtgtagc tcgctacatc attaaagggt
      121 attccgccac tggtgtgtta tttgtcggtg gcctgttatt gctgattatc agtgccatta
      181 tggggcacaa agtgttaccg tccagccagg cttcaacagg ctacagcgcc acggatatcg
      241 ttgaatacgt taaaatatta ctaatgagcc gcggcggcga cctcggcatg atgattatga
      301 tgctgtgtgg atttgccgct tacatgaccc atatcggcgc gaatgatatg gtggtcaagc
      361 tggcgtcaaa accattgcag tatattaact ccccttacct gctgatgatt gccgcctatt
      421 ttgtcgcctg tctgatgtct ctggccgtct cttccgcaac cggtctgggt gttttgctga
      481 tggcaaccct atttccggtg atggtaaacg ttggtatcag tcgtggcgca gctgctgcca
      541 tttgtgcctc cccggcggcg attattctcg caccgacttc aggggatgtg gtgctggcgg
      601 cgcaagcttc cgaaatgtcg ctgattgact tcgccttcaa aacgacgctg cctatctcaa
      661 ttgctgcaat tatcggcatg gcgatcgccc acttcttctg gcaacgttat ctggataaaa
      721 aagagcacat ctctcatgaa atgttagatg tcagtgaaat caccaccact gctcctgcgt
      781 tttatgccat tttgccgttc acgccgatca tcggtgtact gatttttgac ggtaaatggg
      841 gtccgcaatt acacatcatc actattctgg tgatttgtat gctgattgcc tccattctgg
      901 agttcctccg cagctttaat acccagaaag ttttctctgg tctggaagtg gcttatcgcg
      961 ggatggcaga tgcgtttgct aacgtggtga tgctgctggt tgccgctggg gtattcgctc
     1021 aggggcttag caccatcggc tttattcaaa gtctgatttc tatcgctacc tcgtttggtt
     1081 cggcgagtat catcctgatg ctggtattgg tgattctgac catgctggcg gcagtcacga
     1141 ccggttcagg caatgcgccg ttttatgcgt ttgttgagat gatcccgaaa ctggcgcact
     1201 cttccggcat taacccggcg tatttgacta tcccgatgct gcaggcgtca aacctgggtc
     1261 gtaccctatc acccgtttct ggcgtagtcg ttgcggttgc cgggatggcg aaaatctcac
     1321 catttgaagt cgtaaaacgc acctcggtgc cggtgcttgt tgggctagtg attgttatcg
     1381 ttgctacaga gctgatggtg ccaggaacgg cagcagcggt cacaggcaag taaatagtaa
     1441 tgccggaggc aagtttcctc cggctttatc atgtcaccca ctgtggtata tgcgttgtgg
     1501 tctgccaact ttgccgtgaa caatttcagc aataatcaga tggcggctgg cgcaatattc
     1561 aagataacgc ctggcagtgg tgcgactgat ggtcagtgcc tgcgccaccg tttctgccgt
     1621 atgttgcaca ccaggctctt taaacagttt tcgcaccgcg tttagcgtca agggatcaat
     1681 gccggtcggc agttcgtctt taggttcacc gcgagcatag gcattaaaca tctcatcaat
     1741 ttgcttctgg ctggcgctat caatactttc cagcatatgt ttacgctggc ggaaacgggt
     1801 tagcgtttgc cccagccgtt cataggcaat gggcttaatg agataatcaa atacaccaca
     1861 acgtacggct tcagacaccg tttccatatc gctggctgca gtggtaaaca ccacgtcgcc
     1921 gggataatgc gcctgcacca gttcatgcaa taaattaatc cctctgccgt caggaagata
     1981 gttatcgagc aagattagcc ccggcttaaa acgctcgatc atcattcggg cctgcgccag
     2041 gtttcccgcc agtaatatct gactgaatcc gggaatgtga cgaatatatt ccgcatgcat
     2101 ctctgccagc ggcgtttcgt cctcaacgat caatagggtt aatggagctg tcattaggtt
     2161 tcactttcgg aatatagatt gaaaacaagg taccgcaggg atcattatct tcgagagtga
     2221 taacaccacc gcagcgcgtt acgtagctgg caatcaagta caacccaatg ccatgttcac
     2281 cgggctcgtc agcacgcgta ctgaccccct gctcaaatat tttgtctcgt agagactctg
     2341 gaacgccgca gccctgatcg gcgacttcaa tcaccacatc atcgccttca tcgctgagga
     2401 ataattcaac gatcttgttt ccttcatcgc tacgcaggct ggcttcgaag gcgttatcaa
     2461 gtaaattgcc cacaatggct gcaaactcgg tgctatccag tcctggcggc agttgcgaaa
     2521 gctggctacc ggggacaatg atcattttta gccccagttc ccgggcgcgc tgcactttac
     2581 caaaaagcag ccccgccacc tggcgatcgg caaacgcctc gcgcaggctg tcaataagct
     2641 gttgctgggc ctgagactcc ccctgcacca tcgccagcac gcgatcatac tctttcatct
     2701 gcaacagacc attgagcgtc gacatccaat tgagatgctc gtgtcgcaat gtacgaaggc
     2761 tctcgacgta ttgttttatt tgcgtcagtt gcgcattgag ggtggaaatt tcgtctttac
     2821 tacgaaagct gataatggcc cccagcaaat catcacctga acgaatagct tcccgattgg
     2881 caataacgct cagaccgtta aagttagcca ccacatcctg acgtttttca tcaatctgtt
     2941 cggtaaagaa atcggcgggc ctgaccactt cagcaatggg tttacccaac cattgccgtc
     3001 cgggagagct cagccccagc atctttcttg cgttacgatt gatggcggta atgtaaccat
     3061 gcggatccac cgcaatcagc ccttcataaa ccgaactaaa cagcgcctct tgctgacgga
     3121 ccacgcgtgc gatttgcttt ggctccatgc ccatcatttg ccgacggata tgcgctgcca
     3181 ggaaccacga cagcaacatc agaatcccta acagcacgac aaacacgcct gccatcggta
     3241 ataaaaactc agcccgccag ctatcgattt tactcaccag gtagccaatc gacaccacgc
     3301 cgatgacttt tccatcgtca tcaaagattg gcgttttggc gcgcatcgcc atccccattg
     3361 accctttccc ggtaatgaag tagctctccc ctttctccag cgcgccctgt ttggtgaact
     3421 gcataggata accaattttc tccggattag gatggtaaag gcggatcgag tgccggtccc
     3481 caatcaccac ataatcaaaa tcggtatctc tttgtaattt gttagcgatg gtcgccagcc
     3541 gtttgtagtc acgcgttttc accgcagaga tgacactgtc attggaggca ataattttcg
     3601 cctgattcat tgccatgtcg cgtacatgaa gcgttaaata gtcctcaaaa ctggccgtaa
     3661 aatattgcgc cagggctgca atgacaaata ttgagaacac cagaatcagc aaaaagatac
     3721 gcagcggaaa tgccagtctt tggaaaaatg caaactgttt attctcgtta agctgcaaca
     3781 ttgttttcct tgcgggttgt cccgagcctc tttgacggat gtaattaaaa tgttgaatca
     3841 aaatacatag atattaatta tgatcgtggc aaattttatt cattaaatca attaaatcac
     3901 ttaaacctgc tggtcatttc gtaattacat taattaaaaa actta
//
LOCUS       DAPGWB010000259         3815 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.262, whole genome shotgun sequence.
ACCESSION   DAPGWB010000259 DAPGWB010000000
VERSION     DAPGWB010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3815
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.262"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..3666
                     /gene="rhsD"
                     /locus_tag="RHX79_004521"
                     /pseudo
     CDS             1..3666
                     /gene="rhsD"
                     /locus_tag="RHX79_004521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308587.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rhs element protein RhsD"
BASE COUNT          833 a         1094 c         1296 g          592 t
ORIGIN      
        1 ccgggcggga tgacttcggg caacccggta aatccgctgc tgggggcgaa ggtgctgccc
       61 ggcgagacgg accttgcgct gcccggcccg ctgccgttca ttctctcccg cacctacagc
      121 agctaccgga cgaagacgcc tgcaccggtg gggatttttg gccccggctg gaaagcgcct
      181 tctgatatcc gcttacagat acgcgatgat gcactggtac tcaacgacaa cggcggacgg
      241 agcattcact ttgagccgct gctgccgggt gaggcggtgt acagccgcag cgagtccctg
      301 tggctggtgc gtggcggtaa ggcaacgcag ccggacggcc atacgctggc acggctgtgg
      361 gcgtcgctgc cgccggatat ccggttaagc ccgcatcttt acctggcgac caacagcgca
      421 caggggccgt ggtggatact ggggtggtca gagctggtgc cgggtgctga ggacgtactg
      481 ccagcgccgc tgccgccgta ccgggtgctt accgggctgg cagaccgctt cgggcggacg
      541 ctgacgtacc ggcgtgaggc cgccggtgac ctggccgggg aaatcaccgg cgtgacggac
      601 ggtgccgggc gggagttccg tctggtgctg accacgcagg cgcagcgtgc ggaagaggcc
      661 cgtaaacagc gcaccgcttc cttatcttcc cctgacacac cccgccctct ctcagcctca
      721 gcgttccccg acacactgcc cggtaccgaa tacggccccg acaggggcat ccgtctttcg
      781 gcggtgtggc tgatgcacga cccggcatac ccggaaagcc tgcccggtgc gccactggcg
      841 cggtacacgt atacggaagc cggtgaactg ctggcggtat atgaccgcag caatacgcag
      901 gtgcgcgctt tcacgtatga cgcgcagcac ccgggccgga tggtggcgca ccgttacgcg
      961 ggaaggccgg agatgcgcta ccgctacgac gatacggggc gggtggtgga gcaactgaac
     1021 ccggcagggt taagctaccg ctatctttat gagcaggacc gcatcaccgt caccgacagc
     1081 ctgaaccggc gtgaggtgct gcatacagag ggcggggccg ggctgaaacg ggtggtgaaa
     1141 aaagaactgg cggacggcag cgtcacgcgc agcgggtatg acgcggcagg aaggctcacg
     1201 gcgcagacgg acgcggcggg acggcggaca gagtacggtc tgaatgtggt gtccggcgat
     1261 atcacggaca tcaccacacc ggacgggcgg gagacgaaat tttactataa cgacgggaac
     1321 cagctgacgg cggtggtgtc cccggacggg ctggagagcc gccgggaata tgatgaaccg
     1381 ggcaggctgg tatcggagac atcgcgcagc ggggagacag tacgctaccg ctacgatgac
     1441 gcgcacagtg agttaccggc cacgacaaca gatgcgacgg gcagcacccg gcagatgacc
     1501 tggagccgct acgggcagtt gctggcgttc accgactgct cgggctacca gacccgttat
     1561 gaatacgacc gcttcggcca gatgacggcg gtccaccgcg aggaaggcat cagcctttac
     1621 cgccgctatg acaaccgtgg ccggttaacc tcggtgaaag acgcacaggg ccgtgaaacg
     1681 cggtatgaat acaacgccgc aggcgacctg actgccgtta tcaccccgga cggcaaccgg
     1741 agcgagacac agtacgatgc gtggggaaag gcggtcagca ccacgcaggg cgggctgacg
     1801 cgcagtatgg agtacgatgc tgccggacgt gtcatcagcc tgaccaacga gaacggcagc
     1861 cacagcgtct tcagttacga tgcgctggac cggctggtac agcagggcgg ctttgacggg
     1921 cggacgcaac gttatcatta tgacctgacc ggaaaactca cgcagagtga agatgagggg
     1981 cttgtcaccc tctggcacta cgatgcgtcg gaccgcatca cgcaccggac ggtgaacggc
     2041 gacccggcag agcagtggca gtatgacggc cacggctggc tgagagaaat cagccacctg
     2101 agcgaaggcc accgtgtcgc tgtccactac ggctacgacg ataagggccg cctgacgggc
     2161 gaacggcaga cggtggagaa cccggagacg ggggaactgc tgtggcagca tgagacgaaa
     2221 cacgcataca acgaacaggg gctggcaaac cgcgtcacgc cggacagcct gccgccggtg
     2281 gagtggctga cctacggcag cggttacctg gcgggcatga agctgggcgg gacgccgctg
     2341 gtcgagtata cgcgggacag gctgcaccgg gagacggtgc gcagcttcgg cagcagggca
     2401 ggcagtaatg ccgcatatga actgaccagc acatacaccc ccgcaggcca gttacagagc
     2461 cagcacctga acagcctggt gtatgaccgt gactacgggt ggaatgacaa cggcgacctg
     2521 gtgcgcatca gcggcccgcg acagacgcgg gaatacggct acagtgccac gggcaggctg
     2581 gagagcgtgc gcaccctcgc accggacctg gacatccgca tcccgtatgc cacggacccg
     2641 gcgggcaacc ggctgccgga cccggagctg cacccggaca gtaccctcac agtgtggccg
     2701 gataaccgca tcgcgaagga tgcgcactat gtttaccact acgatgaata cggcagactg
     2761 acggagaaga cggaccgcat cccggcgggt gtgatacgga cggacgacga gcgcacccat
     2821 cactaccatt acgacagcct gcaccgcctg gtccattaca tccgtatcca atatgaggag
     2881 ccgctggtcg agagccgata cctttacgac ccgctgggac ggcgaatggc gaaacgggta
     2941 tggcggcggg agcgtgacct gacggggtgg atgtcgctgt cgcgtaaacc ggagatgacg
     3001 tggtacgggt gggacggcga ccggctgacg acggtacaga ccgacaccac gcgtatccag
     3061 acggtatatc agccggggag cttcgcgccg ctcatccgca tcgaaacaga caacggcgag
     3121 cgggagaaag cgcagcgccg cagcctggcg gagaagctgc agcaggaagg gagcgaggac
     3181 gggcacggcg tggtatttcc ggctgaactg gtgcggctgc tggacagact ggaggaagaa
     3241 atccgggcag accgcgtgag cagtgaaagc cgggcgtggc ttgcgcagtg cgggctgacg
     3301 gtggagcaac tggccagaca ggtggagccg gaatacacac cggcgcgaaa agctcatctt
     3361 tatcactgcg accaccgggg actgccgctg gcgcttatca gcgaagacgg caatacggcg
     3421 tggagcgcgg aatatgatga atggggcaac cagcttaatg aggagaaccc gcatcatgtg
     3481 tatcagccgt accgtctgcc agggcagcag catgatgagg aatcagggct gtactataac
     3541 cgtcaccggt actacgatcc gttgcagggg cggtatatta ctcaggaccc gatggggttg
     3601 aaagggggat ggaatttata tcagtatcct ttaaatccac tacaacaaat tgaccctatg
     3661 ggattattgc agacttggga tgatgccaga tctggagcat gtacgggggg agtttgtggt
     3721 gttctttcac gtataatagg accaagtaaa tttgatagta ctgcagatgc tgcgttagat
     3781 gctttgaaag aaacgcagaa tagatctcta tgtaa
//
LOCUS       DAPGWB010000260         3802 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.263, whole genome shotgun sequence.
ACCESSION   DAPGWB010000260 DAPGWB010000000
VERSION     DAPGWB010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3802
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.263"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..545)
                     /locus_tag="RHX79_004522"
     CDS             complement(<1..545)
                     /locus_tag="RHX79_004522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HDV2199599.1"
                     /translation="MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKES
                     AYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTL
                     IWLPTDGDAENFMKTHVEPTIRDIPSLLALAPWYGKKHRDNTLTMKRFTNGRGFWCLG
                     GKAAKNYREKSVDVAGYDELAA"
     gene            complement(520..1065)
                     /locus_tag="RHX79_004523"
     CDS             complement(520..1065)
                     /locus_tag="RHX79_004523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-packaging protein"
                     /protein_id="HDV2199600.1"
                     /translation="MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSA
                     AAIKWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNA
                     RDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMN
                     KAAALDELIPGLLSEYIEQSG"
     gene            1454..1648
                     /locus_tag="RHX79_004524"
     CDS             1454..1648
                     /locus_tag="RHX79_004524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001307652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlcI/YnfO family protein"
                     /protein_id="HDV2199601.1"
                     /translation="MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEA
                     CRRRLTSEKRAYTSIQSDDG"
     gene            2009..2302
                     /gene="iss"
                     /locus_tag="RHX79_004525"
     CDS             2009..2302
                     /gene="iss"
                     /locus_tag="RHX79_004525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="increased serum survival lipoprotein Iss"
                     /protein_id="HDV2199602.1"
                     /translation="MKKMLFSAALAMLITGCAQQTFTVGNKPTAVTPKETITHHFFVS
                     GIGQEKTVDAAKICGGAENVVKTETQQTFVNGFLGFITLGIYTPLEARVYCSQ"
     gene            complement(2393..2575)
                     /gene="rzoD"
                     /locus_tag="RHX79_004526"
     CDS             complement(2393..2575)
                     /gene="rzoD"
                     /locus_tag="RHX79_004526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage lysis lipoprotein RzoD"
                     /protein_id="HDV2199603.1"
                     /translation="MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPPPPAWIMQPPP
                     DWQTPLNGIISPSERG"
     gene            complement(2792..3289)
                     /gene="rrrD"
                     /locus_tag="RHX79_004527"
     CDS             complement(2792..3289)
                     /gene="rrrD"
                     /locus_tag="RHX79_004527"
                     /EC_number="3.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme RrrD"
                     /protein_id="HDV2199604.1"
                     /translation="MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKD
                     IVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETMRGAL
                     YSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWIYAGGKQWKGLMTRREIEREIC
                     LWGQQ"
     gene            complement(3289..3504)
                     /gene="essD"
                     /locus_tag="RHX79_004528"
     CDS             complement(3289..3504)
                     /gene="essD"
                     /locus_tag="RHX79_004528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage lysis protein EssD"
                     /protein_id="HDV2199605.1"
                     /translation="MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGS
                     LVFGLLTYLTNLYFKIKEDKRKAARGE"
BASE COUNT         1015 a          975 c          848 g          964 t
ORIGIN      
        1 gcagcaagtt catcataacc cgccacatcc actgactttt cacggtagtt ttttgccgct
       61 ttaccgccca ggcaccagaa accacgccca ttggtgaaac gcttcatggt gagcgtgtta
      121 tcccggtgct ttttgccata ccacggggcc agcgccagca gcgatggaat atcacggatg
      181 gtcggctcga cgtgggtttt cataaagttc tcggcatcgc catccgtcgg caaccagata
      241 agggtgttgc gctgcttatg ctctatgaag taggcataaa cacccaacag cattttggaa
      301 taaccaacac gggcagactt caccacattc acctcgcgga tgtagtcgct gcccatcgca
      361 ttcatgatgg cccgctgaaa gggcagtgtt tcccagcgcc cttcctggta tgcggattct
      421 ttcgggagat agtaattggc atccgcccat tcaacggcgg tctgtggctc cggcctgaac
      481 agtgagcgaa gcccggcgcg gacaaaatgc cgcagcctgt taacctgact gttcgatata
      541 ttcactcagc aaccccggta tcagttcatc cagcgcggct gctttgttca tggctttgat
      601 gatatcccgt ttcaggaaat caacatgtcg gttttccagt tccggaaaac gccgctgcac
      661 cgacaggggg atcccgtcga gaatactggc aatttcacct gcgatccgcg acagcacgaa
      721 agtacagaat gcggtttcca ccacttcagc ggagtctctg gcatttttca gctcctgtgc
      781 gtcggcctgc gcacgcgtaa gtcgatggcg ttcgtactca atagtccctg gctggagatc
      841 tgtctcgctg gcctgccgca gttcttcaac ttcccggcgc agcttttcgt tctcaatttc
      901 agcatccctt tcggcatacc attttatggc ggcggcagag tcataaagca cttcattacc
      961 cttgccacca ccccgcagaa cgggcattcc ctgctcctgc cagttctgaa tggtacggat
     1021 actcgcgccg aaaatgtcag ccagctgctt tttgttgact tccattgttc attccacgga
     1081 caaaaacaga gaaaggaaac gacagaggcc aaaaagctcg ttttcagcac ctgtcgtttc
     1141 ctttcttttc agagggtgtt ttaaataaaa acattaagtt acgacgaaga agaacggaaa
     1201 cgccttaaac cggaaaattt tcataaatag cgaaaacccg cgaggtcgcc gccccgtaac
     1261 ctgtcggatc gccggaaagg acccgcaaaa tgataataat tatcatctac atgtcacaac
     1321 gtgcatctac gccatcaaac cacgtcaaat aatcaattat gacgcaggta tcgtattaat
     1381 tgatctgcat caacttaacg taaaaacaac ttcagacaat acaaatcagc gacactgaat
     1441 acggggcaac ctcatgtcaa cgaagaacag aacccgcaga acaacaaccc gcaacatccg
     1501 ctttcctaac caaatgattg aacaaattaa catcgctctt gagcaaaaag ggtctgggaa
     1561 tttctcagcc tgggtcattg aagcctgccg tcggagacta acgtcagaaa agagagcata
     1621 tacatcaatc caaagtgatg atggatgaac atcccggttt cttccaccat cgcaccggaa
     1681 aagcgactat gagggtaacc ctgcgtctgt cagcacagta aaacccggtg tgcatcgttt
     1741 ttgattattc ccgcacactc acgcagaagg aattccccgt cgggctacgg tcatggttaa
     1801 tgcgggaata cggcgacgat acagcgcagc taaaagggta atggacagat agagcggttt
     1861 atttcattcc acaggattct gagtgccccc cctcctccaa taggctgagc atccacctat
     1921 atagttttaa ttttcatcaa tccatttaac tatcgtttaa ttgttgtcac ataggattct
     1981 gccgttttta acaatgcagg ataataagat gaaaaaaatg ttgttttctg ccgctctggc
     2041 aatgcttatt acaggatgtg ctcaacagac gtttactgtt ggaaacaaac cgacagcagt
     2101 aacaccaaag gaaaccatca cccatcattt cttcgtttcg ggaattggac aggagaaaac
     2161 tgttgatgca gccaaaattt gtggcggcgc agaaaatgtt gttaaaacag aaacccagca
     2221 aacattcgta aatggatttc tcggttttat tactttaggc atttatactc cgctggaagc
     2281 gcgtgtgtat tgctcacaat aattgcatga gttgcccatc gatatgggca gctctatctg
     2341 cactgctcat taatatactt ctgggttcct tccagttgtt tttgcatagt gatcagcctc
     2401 tctctgaggg tgaaataatc ccgttcagcg gtgtctgcca gtcgggggga ggctgcatta
     2461 tccacgccgg aggcggtggt ggcttcacgc actgactgac agactgcttt gatgtgcaac
     2521 cgacgacgac cagcggcaac atcatcacgc agagcatcat tttcagcttt cgcatcagct
     2581 aactccttcg tgtattttgc atcgagcgca gcaacatcac gctgacgcat ctgcatgtca
     2641 gtaattgccg cgttcgccag cttcagttct ctggcatttt tgtcgcgctg ggctttgtag
     2701 gtaatggcgt tatcacggta atgattaaca gcccatgaca ggcagacgat gatgcagata
     2761 accagagcgg agataatcgc ggttactctg ttcattgctg accccacaaa cagatttcac
     2821 gctcaatctc acgacgagtc atgagacctt tccattgctt accgccagca tatatccagc
     2881 gacgtagctg atcacatgcg cctttgatat cgccctggtt tattttgcga agaagcgtcg
     2941 atgttctgaa attgccagca cccacgttgt aaacgaatga gtaaagagcg ccgcgcattg
     3001 tttccggtat atcgactttg atgtacgggt taatttgtct ggcgaccgtg gcaaggtctt
     3061 tattcaggag ggctttgcat tctgctttgg tatacgtttt accgagcatg atgtcttttc
     3121 ctgtatgccc gtgacataca gtccatacac caacaatatc tttgtatggt atgtagctga
     3181 caccttccag accatcgtta ccacttgggc cagtgattaa cactgatgct atagcaattg
     3241 ctccgccacc aatagcagca gcaacggctt ttcgtaatga tggaggcatt attcacctct
     3301 cgcagccttg cgcttatctt ctttaatctt gaaataaagg tttgtcaggt acgtcagcag
     3361 gccaaatacc aggctaccca gcacacctat tgctgcccac tgtgagggcg tgactttatc
     3421 gagcagctgt aaaaaccagt aaccggcact acctgctgag gtgccatagg cgacacccgt
     3481 tgttaactta tccatggatt tcataacccc acctcgcaga caaagcgggt gtaaattgag
     3541 ggaatacaac gtatcgcaaa aaagcagaaa cgtaacagac tcggagtcag tgaataactc
     3601 aggtattgag ttatcagcta atatcgagac tcaaaaaatg gaaaaaccag ctcgacggcg
     3661 ggtttaagct gtgtgacgaa gtaaccactc ttaacagcat aaccaatttt ttacgtacgt
     3721 aaaccactga atgatattta tgagaatgct accgagtgtt caaaacacca ccacaaatac
     3781 ataagaaaac ctcaacaaat aa
//
LOCUS       DAPGWB010000261         3671 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.264, whole genome shotgun sequence.
ACCESSION   DAPGWB010000261 DAPGWB010000000
VERSION     DAPGWB010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3671
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.264"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(94..>3671)
                     /locus_tag="RHX79_004529"
     CDS             complement(94..>3671)
                     /locus_tag="RHX79_004529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000509073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HDV2199606.1"
                     /translation="FHRAAKGDVAGAVTGVTDGAGRRFHLALTTQAQRAEAFRKQRAT
                     SLSSPAGPRSASSSSAFPDTLPAGTEYGADNGIRLEAVWLTHDPAYPDEQPTAPLARY
                     TYTASGELRAVYDRSGTQVRGFTYDAEHAGRMVAHHYAGRPESRYRYDDTGRVTEQVN
                     PEGLDYRFEYGQDRVTITDSLNRREVLYTEGEGGLKRVVKKEHADGSITRSEYDEAGR
                     LKAQTDAAGRRTEYRLHMASGKLTSVILPDGRTVRYGYNSQRQVTSVTYPDGLRSSRE
                     YDEKGRLTAETSRSGETTRYSYDDPASELPTGIQDATGSTKQMAWSRYGQLLAFTDCS
                     GYTTRYEYDRYGQQIAVHREEGISTYSSYNPRGQLVSQKDAQGREIRYEYSAAGDLTA
                     TISPDGKRSTIAYDKRGRPVSVTEGGLTRSMGYDAAGRITVLTNENGSQSTFRYDPVD
                     RLTEQRGFDGRTQRYHYDLTGKLTQSEDEGLITLWHYDASDRITHRTVNGDPAEQWQY
                     DEHGWLTTLSHTSEGHRVSVHYGYDDKGRLTGERQTVENPETGELLWQHETKHAYNEQ
                     GLANRVTPDSLPPVEWLTYGSGYLAGMKLGGTPLVEYTRDRLHRETVRSFGSRAGSNA
                     AYELTSTYTPAGQLQSQHLNSLVYDRDYGWNDNGDLVRISGPRQTREYGYSATGRLES
                     VRTLAPDLDIRIPYATDPAGNRLPDPELHPDSTLTAWPDNRIAEDAHYVYHYDEYGRL
                     TEKTDRIPTGVIRTDDERTHHYHYDSQHRLVFHTRIQHGEPLVESRYLYDPLGRRMAK
                     RVWRRERDLTGWMSLSRKPEETWYGWDGDRLTTVQTDTTRIQTVYQPGSFAPLIRIET
                     DNGEREKAQCRSLAEKIQQEGSEDGHGVVFPAELVGLLDRLEEEIRANCVSSESRQWL
                     AQCGLTVERLAAQIEPVYLPERKIHLYHCDHRGLPLALISEDGNTAWSAEYDEWGNQL
                     NEENPHHLHQPYRLPGQQYDKESGLYYNRHRYYDPLQGRYITPDPIGLRGGWNMYQYP
                     LNPIQVIDPMGLDAIENMTSGGLIYAVSGVPGLIAANSITNSAYQFGYDMDAIVGGAH
                     NGAADAMRHCYLMCRMTKTFGSTIADVIGKNHEAAGNRQGQPAKERIMDLKNNTVGIA
                     CGDFSAKCSDACIEKYNTGQLFGLDGIKADNPIKAKQGSSDASNY"
BASE COUNT          635 a         1209 c          958 g          869 t
ORIGIN      
        1 ccataaaata cgatgtcaga atttgaattg ttatcaaacc caaggtaaac aacaaataaa
       61 caaagggtaa ttaaaaaaat gacaagtttg cctctaataa tttgaagcat ctgaactccc
      121 ttgctttgct tttattggat tatctgcttt tataccatct aacccgaaga gttgcccagt
      181 gttatatttt tcaatacatg catcgctaca tttggcagaa aaatcgccac aagcaatacc
      241 gacagtgtta tttttaagat ccatgattct ttctttagct ggctgacctt gtctattccc
      301 tgccgcctca tgatttttac ctatcacgtc agctattgtt gatccaaatg tcttagtcat
      361 tcgacacatc aagtaacaat gtctcattgc atcggcggcc ccattatgag ctccgccaac
      421 aatagcatcc atatcataac cgaactggta agcactgtta gtaatgctgt ttgcagcaat
      481 caatccaggt acaccagata cggcataaat tagtccacct gatgtcatat tctcaatcgc
      541 atctaacccc attgggtcta tcacttgtat gggattcaac ggatactgat acatattcca
      601 tccacctctc aacccaatcg ggtccggggt gatataccgc ccctgcaacg gatcgtagta
      661 ccggtgacgg ttatagtaca gccccgactc cttatcatac tgctgccccg gcagccggta
      721 cggctggtgc aggtgatgcg ggttctcctc attaagctgg ttgccccatt catcatattc
      781 cgcgctccac gccgtattgc cgtcttcact gataagcgcc agcggcaggc cccggtggtc
      841 acagtgataa agatgtattt ttcgctcagg caaataaacc ggctctatct gtgccgccag
      901 ccgctccacc gtcagcccgc actgcgcaag ccactggcgg ctttcactgc tcacgcagtt
      961 tgcccggatt tcttcctcca gtctgtccag cagccccacc agttcagccg ggaacaccac
     1021 accgtgaccg tcttcgctcc cttcctgctg tatcttctcc gccaggctgc ggcactgcgc
     1081 tttctcccgt tcaccgttgt ctgtttcgat gcggatgagc ggcgcgaagc tccccggctg
     1141 gtataccgtc tggatacgcg tggtgtcggt ctgtaccgtc gtcagcctgt cgccgtccca
     1201 gccgtaccat gtctcctccg gtttacgcga cagcgacatc caccccgtca ggtcacgctc
     1261 ccgccgccat acccgtttcg ccattcgccg tcccagcggg tcgtagaggt agcggctctc
     1321 gaccagtggc tcgccatgct gtatccgcgt gtggaacacc aggcggtgct ggctgtcgta
     1381 gtggtagtgg tgggtccgct cgtcgtccgt ccgtatcaca cccgtcggga tgcggtccgt
     1441 cttctccgtc agtctgccgt attcatcata gtggtaaaca tagtgcgcat cctctgcgat
     1501 gcggttatcc ggccacgccg tgagcgtgct gtccgggtgt agctccgggt ccggcaggcg
     1561 gtttcccgcc gggtcggtgg catacgggat gcggatgtcc aggtccggtg cgagggtgcg
     1621 cacgctctcc agcctgcccg tggcactgta gccgtattcc cgcgtctgtc gcggaccgct
     1681 gatgcgcacc aggtcgccgt tgtcattcca cccgtagtca cggtcataca ccaggctgtt
     1741 caggtgctgg ctctgtaact ggcctgcggg ggtgtatgtg ctggtcagtt catatgcggc
     1801 attactgcct gccctgctgc cgaagctgcg caccgtctca cggtgcagcc tgtcccgcgt
     1861 atactcgacc agcggcgtcc cgcccagctt catgcccgcc aggtaaccgc tgccgtaggt
     1921 cagccactcc accggcggca ggctgtccgg cgtgacgcgg tttgccagcc cctgttcgtt
     1981 gtaggcgtgt ttcgtctcat gctgccacag cagttccccc gtctccgggt tctccaccgt
     2041 ctgccgttcg cccgtcaggc ggcccttatc gtcgtagccg tagtggaccg acacgcggtg
     2101 gccttcactg gtatggctga gggtggttaa ccacccgtgc tcatcatact gccactgctc
     2161 tgccgggtcg ccgttcaccg tccggtgcgt gatgcggtcc gacgcatcgt agtgccagag
     2221 ggtgataagc ccctcgtctt cactctgcgt gagttttccg gtcaggtcat agtggtaacg
     2281 ttgcgtccgg ccgtcaaaac cgcgctgttc agtcagcctg tccaccgggt cataccggaa
     2341 cgtggactgg ctgccgttct cgttggtcag cacggtgatg cgcccggcag cgtcataccc
     2401 catgctgcgc gtaagaccgc cttccgtcac actcaccgga cgcccgcgtt tatcatatgc
     2461 gatggtgctg cgtttaccgt ccggtgatat cgttgctgtc aggtcgcctg cggcgctgta
     2521 ctcataacgg atttcacgcc cctgcgcatc cttctgactg accagttgcc cacgcgggtt
     2581 ataactgctg taagtgctga tgccttcctc ccggtgaacg gcgatttgtt gaccgtaccg
     2641 gtcgtactca taccgcgtcg tgtaccccga gcagtccgtg aaggccagca gttgaccgta
     2701 acggctccat gccatctgtt ttgtactgcc cgtcgcgtcc tgtatccctg tcggcagctc
     2761 actcgccggg tcatcatagc tgtaccgcgt cgtctcaccg ctgcgcgagg tctccgccgt
     2821 cagccttccc ttctcatcat actcccggct gctgcgaagc ccgtccgggt acgtcaccga
     2881 cgtcacctgc cgctggctgt tatagccata ccgtaccgtc ctgccatccg gcagtatcac
     2941 tgaagtcagc tttccagacg ccatatgcag tcggtactcc gtccgccgtc ccgccgcatc
     3001 cgtctgcgcc ttcagcctcc ccgcctcatc atactcgctg cgggtgatgc tgccgtccgc
     3061 atgctccttc ttcaccacac gcttcaggcc gccttcgccc tccgtgtaca gcacctcccg
     3121 ccggttcagg ctgtccgtga tggtcacacg gtcctgcccg tactcaaagc gatagtccag
     3181 cccctccggg ttgacctgct ccgtcacccg cccggtatca tcataccggt agcggctctc
     3241 cggcctcccc gcataatggt gtgccaccat ccgcccggcg tgctccgcat cataagtaaa
     3301 cccgcgaacc tgcgtcccgc tgcggtcata caccgcccgc agttctccgc tggccgtgta
     3361 cgtgtagcgc gccagcggcg cagtcggctg ttcatccggg tatgccgggt cgtgtgtcag
     3421 ccacaccgcc tccagccgga taccgttatc ggcaccgtat tctgtaccgg cgggcagcgt
     3481 gtcggggaaa gcagaagaag aggaagcaga acggggaccg gcaggggaag ataaagacgt
     3541 ggcgcgctgt ttacggaagg cttccgcccg ctgcgcctgc gtggtcagcg ccaggtgaaa
     3601 acggcggccc gcgccgtccg tcacccccgt caccgcgccc gccacgtcac ccttagctgc
     3661 ccggtggaaa g
//
LOCUS       DAPGWB010000262         3650 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.265, whole genome shotgun sequence.
ACCESSION   DAPGWB010000262 DAPGWB010000000
VERSION     DAPGWB010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3650
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.265"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..156
                     /locus_tag="RHX79_004530"
     CDS             <1..156
                     /locus_tag="RHX79_004530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199607.1"
                     /translation="KIILIHVKNIIPIITATLILNYLNNSERSLVKQILIEDEIIVCA
                     TYLIPDI"
     gene            158..502
                     /locus_tag="RHX79_004531"
     CDS             158..502
                     /locus_tag="RHX79_004531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415690.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper family protein"
                     /protein_id="HDV2199608.1"
                     /translation="MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNG
                     VNGVLKGAAVGAGVGAVTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVI
                     GGTGGAILGKMK"
     gene            506..841
                     /locus_tag="RHX79_004532"
     CDS             506..841
                     /locus_tag="RHX79_004532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmgD family protein"
                     /protein_id="HDV2199609.1"
                     /translation="MMMKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEM
                     AKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAID
                     DTMRAIGKK"
     gene            complement(898..3219)
                     /locus_tag="RHX79_004533"
     CDS             complement(898..3219)
                     /locus_tag="RHX79_004533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDV2199610.1"
                     /translation="MQGKNTIVITGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFS
                     DGDDTFIVTAGNHAVGVLACASPGSARACVSSLDEESTTDTGSNENNAIAKLDMAKGE
                     ITTHGTESYAAYANGTVVKAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFN
                     QGEIYTTGPDAATAKIYNGGTVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSSL
                     RSANEILYHKNETSNVTITDSEVSSAADVFINNIKGHLTVDATNSKITGSANISTDVN
                     THTYLSLSDNSTWDIKADSTVSNLTVDNSTVYISRADGRDVEPTRLTITENYVGNNGV
                     LHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEF
                     IKDSRIFAGAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSAPTVAPTPVLRL
                     EAGSYIANLAAANTLFVMRLNDRAGEMRYIDPVTEQERSSRLWLRQIGGHNAWRDSNG
                     QLRTTSHRYVSQLGAELLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSVRG
                     YCAGLYATWFADDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYG
                     FALNKSFGLEAAKYTWIFQPQAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRT
                     FIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQDGASNLGEIKLGVNGN
                     LNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF"
     gene            complement(3336..3545)
                     /locus_tag="RHX79_004534"
     CDS             complement(3336..3545)
                     /locus_tag="RHX79_004534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199611.1"
                     /translation="MKLKKLSGFSLGLIALAVGNAYAEQFIQHDEYKHAVAIKDGKVK
                     DIDNALVITTGNGSYGYPLQERVAS"
BASE COUNT          961 a          877 c          799 g         1013 t
ORIGIN      
        1 aagattattc tcattcacgt aaaaaacata attcctatca tcacagccac gctcattttg
       61 aattatctga ataatagcga gcgttcttta gttaagcaga tcttaattga agacgaaatt
      121 attgtgtgtg caacttactt aataccggac atctaagttg aagaaaaaaa tacttgcctt
      181 cgggcttatc tcagcattgt tctgctccac gccagcgatg gcggatatga atcgcaccac
      241 gaaaggtgca ttgctaggcg caggcgttgg tttacttact ggcaatggtg ttaatggcgt
      301 actgaaaggt gcagctgttg gcgctggtgt tggtgcagta acagaaaaag gccgcgacgg
      361 taaaaatgcg cgtaaaggtg caaaagtagg tgccgccgtt ggtgctgtca ctggcgttct
      421 gaccggcaat ggcctcgaag gggcgattaa aggtgccgtg attggcggta cgggtggtgc
      481 aattctgggt aaaatgaaat aaggaatgat gatgaaaaaa tttgctttac tggcgggcct
      541 gtttgttttc gcaccaatga cctgggcgca ggactacaat attaaaaacg gtttgccgtc
      601 agaaacctat attacttgcg cagaagccaa cgaaatggca aaaactgaca gcgcacaggt
      661 tgcagaaatt gttgcggtaa tgggtaatgc cagcgttgcc agccgtgatt taaaaattga
      721 gcaatctccg gaactgagcg ccaaagtggt agaaaaactg aatcaggttt gcgctaaaga
      781 cccgcaaatg ctgttgatca cggcaattga tgacaccatg cgtgctatcg gcaaaaaata
      841 atatttcata tgtaccgcgt cgatgaatac gacgcggttt tttagctaac ggcgggatca
      901 gaacttatat ttcaggccca ccatcactgc ggtgtcattg tagccattat cacccagctg
      961 cacgcccaca ttcccccaga cgctggccgc tggattcagg ttgccattta cgccaagttt
     1021 aatttccccc aaattactcg ccccatcttg ttcgactttc acaccgttca ttgagacagc
     1081 aaaatcttta ctgttatgga tccagttcat ttcaacaaaa ggttcaaagt cgtcaccgtg
     1141 cggaccgctg tttttctcct gagtacgaat aaaggtgcgg aaaccaagtc gggtctggat
     1201 gttgttattt gcgtcattct caatacgtga gccattggct tcggtgtgcg cattatgatc
     1261 gacgcccatc cagatagcct gtgcctgtgg ctggaatatc cacgtgtatt tcgccgcttc
     1321 cagaccaaag gatttattca gggcaaagcc gtaacccgct tccagcgaga cggttgcgcc
     1381 tttcgcacta taggattcat aggctaattc atcccctttc accgagtttt taaaccagct
     1441 atattgcgcc caggcgtcaa tgtatgcgcc ttttttactg atgtcatcgg caaaccaagt
     1501 ggcatacagc cctgcgcaat agcctctgac actccctttc gaacgataat ccgacacgct
     1561 ggaatgagtt gagttgtagt cgcgggcata accagccatc actcccaaac gccaactgtc
     1621 actgtcggta aaaccaccgg ttaacagctc ggcccctaac tgcgagacgt agcgatgcga
     1681 ggtcgttctc aactgtccgt tgctgtcacg ccaggcatta tgcccgccaa tttgacgtag
     1741 ccaaagtcgg cttgaacgct cctgttcagt tacaggatcg atgtagcgca tttcacccgc
     1801 acggtcgttc agacgcataa caaaaagagt gttagcggct gccaggttgg cgatgtaact
     1861 tccagcttcg aggcgcagga cgggggtagg cgcaacagta ggcgctgaac ttcctccgga
     1921 gtttgtttca ccgccgctcg ttgcctggaa gttagtcaga taccagtttt tattggtcgc
     1981 ttcggtatta cctcgggtta atgaatattc gtaggcaccg gcgaaaatcc tcgaatcctt
     2041 aataaattcc ccatttgatt ccccctcaac gctgataatc tctatcccat ttaacgtgta
     2101 agctccgctg cctcctgcat tggtaacttt aactcgggtt gttccagagg tatttccatt
     2161 aataacgact ttatccgtag ctgaattatc atcacccaat tcagttctga gatgcaatac
     2221 gccattatta ccaacgtaat tttcagttat tgttaatctt gttggttcga catcccgtcc
     2281 atctgcccgg gaaatataga ccgtactatt atcaaccgtg aggttgctca ccgttgagtc
     2341 agctttaata tcccaggtac tattatctga aagcgacaga taggtatgag tgttaacatc
     2401 tgttgaaata ttagctgaac ccgttatttt tgaattagtt gcatcgacgg tcaaatgacc
     2461 tttaatatta ttgataaaaa catctgcagc cgatgatacc tcactatccg taatggtcac
     2521 gttactcgtc tcatttttat ggtagaggat ttcatttgct gaccgtagtg agctaccaga
     2581 taaaatatct accgttgctt cctgaccatt tatggaagac tccagcacaa ttccagaccc
     2641 ctgatgcgcg actgcagatg tatttttcag cgtcaccgtg ccgccattat aaattttagc
     2701 agtcgcggcg tcaggacccg ttgtataaat ttctccctgg ttaaatgaaa ctgtcccctg
     2761 gcgggcagcg atggcatgag cattgtcccc atgcgtggtg atatcaacat cggttaatgt
     2821 aacgctggca ttggtataat caagcgtgtc accagccttg acgacagtgc cattagcgta
     2881 cgcggcataa ctttctgttc cgtgggttgt gatctcccct tttgccatat ccagttttgc
     2941 tatggcatta ttttcattac ttcctgtatc ggtagtactt tcttcatcaa gagaagatac
     3001 acacgcacgc gcgcttccgg gagatgcaca cgcaagaacg ccgactgcgt gattacccgc
     3061 agtaacaata aatgtatcat ctccgtcaga aaaagagggg gtaaccgaac cgtcagagtt
     3121 gactcttatt atggtgtcag tattcaggtt tccactcgtt tgacttagca aaccaattga
     3181 gtaatccccc gttatgacaa tcgtgttttt accctgcaaa ataacagcac cgccaaattc
     3241 acttacgatt gcgctagctg ttaatgctgt gcttagagga ctattgtcag aaggatataa
     3301 accgcccgtt gttacaatga cgccattgtt aatggttaac ttgctaccct ctcctgcaac
     3361 ggatacccgt aacttccatt acccgttgtt ataactagcg cattatcaat atcttttact
     3421 tttccatctt ttattgccac agcatgttta tattcatcgt gctgaataaa ctgttcagca
     3481 tatgcattac ccaccgccag agcaataagt cccaaactaa acccggagag ttttttcagt
     3541 ttcatagatt aaccatccat tcattggatt aacaaacatt cctggtcaaa taacctatgc
     3601 gttcagatta ccaaaacgga gggtaaagac aaaaacaaaa gcacaaaaaa
//
LOCUS       DAPGWB010000263         3624 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.266, whole genome shotgun sequence.
ACCESSION   DAPGWB010000263 DAPGWB010000000
VERSION     DAPGWB010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3624
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.266"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..363
                     /locus_tag="RHX79_004535"
     CDS             <1..363
                     /locus_tag="RHX79_004535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HDV2199612.1"
                     /translation="YQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGY
                     TLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYL
                     SDHPKLQGIAQQNSFKHT"
     gene            519..2054
                     /gene="gadC"
                     /locus_tag="RHX79_004536"
     CDS             519..2054
                     /gene="gadC"
                     /locus_tag="RHX79_004536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance gamma-aminobutyrate antiporter
                     GadC"
                     /protein_id="HDV2199613.1"
                     /translation="MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVF
                     FLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIG
                     FIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGF
                     FAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVE
                     ASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFT
                     VLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNK
                     NGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVL
                     VLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLV
                     VSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMND
                     KKH"
     gene            2185..3504
                     /locus_tag="RHX79_004537"
     CDS             2185..3504
                     /locus_tag="RHX79_004537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 10 protein"
                     /protein_id="HDV2199614.1"
                     /translation="MDICSRNKKLTIRRPAILVALALLLCSCKSTPPESMVTPPAGSK
                     PPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLG
                     INTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWF
                     NPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITS
                     IVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIA
                     KVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLD
                     YIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMING
                     GVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLHSRWGS"
BASE COUNT          874 a          913 c          891 g          946 t
ORIGIN      
        1 taccaggttg ccgcttatct ggcggatgaa atcgccaaac tggggccgta tgagttcatc
       61 tgtacgggtc gcccggacga aggcatcccg gcggtttgct tcaaactgaa agatggtgaa
      121 gatccgggat acaccctgta cgacctctct gaacgtctgc gtctgcgcgg ctggcaggtt
      181 ccggccttca ctctcggcgg tgaagccacc gacatcgtgg tgatgcgcat tatgtgtcgt
      241 cgcggcttcg aaatggactt tgctgaactg ttgctggaag actacaaagc ctccctgaaa
      301 tatctcagcg atcacccgaa actgcagggt attgcccagc agaacagctt taaacatacc
      361 tgataacgtt taacggtaac ggtgtcccga aacgaacccg tttcgggaca atttccaaag
      421 tctgttcact ggcattagca acggaaaata ttgttctgaa tacgcttcag aacaaaacag
      481 gtgcggttcc gacaggaata ccgttttagg gggataatat ggctacatca gtacagacag
      541 gtaaagctaa gcagctcaca ttactcggat tctttgccat aacggcatcg atggtaatgg
      601 ctgtttatga ataccctacc ttcgcaacat cgggcttttc attagtcttc ttcctgctat
      661 taggcgggat tttatggttt attcccgtgg gactttgtgc tgcggaaatg gccaccgtcg
      721 acggctggga agaaggtggt gtcttcgcct gggtatcaaa tactctgggg ccgagatggg
      781 gatttgcagc gatctcattt ggctatctgc aaatcgccat tggttttatt ccgatgctct
      841 atttcgtgtt aggggcactc tcctacatcc tgaaatggcc agcgctgaat gaagacccca
      901 ttaccaaaac tattgcagca ctcatcattc tttgggcgct ggcattaacg cagtttggtg
      961 gcacgaaata cacggcgcga attgctaaag ttggcttctt cgccggtatc ctgttacctg
     1021 catttatttt gatcgcatta gcggctattt atctgcactc cggtgccccc gttgctatcg
     1081 aaatggattc gaagaccttc ttccctgact tctctaaagt gggcacactg gttgtatttg
     1141 ttgccttcat tttgagttat atgggcgtag aagcttccgc aactcacgtc aatgaaatga
     1201 gcaaccccgg gcgcgactat ccactggcta tgttactgct gatggtggcg gcaatctgct
     1261 taagctctgt tggcggttta tctattgcga tggtcattcc gggtaatgaa atcaacctct
     1321 ccgcaggtgt aatgcaaacc tttaccgttc tgatgtccca tgtggcaccg gaaattgagt
     1381 ggacggttcg cgtgatctcc gcactgctgt tgctgggtgt tctggcggaa atcgcctcct
     1441 ggattgttgg tccttctcgc gggatgtatg tcacagcgca gaaaaacctg ctgccagcgg
     1501 cattcgctaa aatgaacaaa aatggcgtac cggtaacgct ggtcatttcg cagctggtga
     1561 ttacttctat cgcgttgatc atcctcacca ataccggtgg cggtaacaac atgtccttcc
     1621 tgatcgcact ggcgctgacg gtggtgattt atctgtgtgc ttatttcatg ctgtttattg
     1681 gctacattgt gttggttctt aaacatcctg acttaaaacg cacatttaat atccctggtg
     1741 gtaaaggggt gaaattggtc gtggcaattg tcggtctgct gacttcaatt atggcgttta
     1801 ttgtttcctt cctgccgccg gataacatcc agggtgattc taccgatatg tatgttgaat
     1861 tactggttgt tagtttcctg gtggtacttg ccctgccctt tattctctat gctgttcatg
     1921 atcgtaaagg caaagcgaat accggcgtca ctctggagcc aatcaacagt cagaacgcac
     1981 caaaaggtca cttcttcctg cacccgcgtg cacgttcacc acactatatt gtgatgaatg
     2041 acaagaaaca ctaaccatgt ctgaatggtt ataagacaag ggagcgataa gtcatcgctc
     2101 cctttttcgt gcttgctgtc gtattgactt aaccgggata agtacgagaa tgagcgcaca
     2161 tctgtttacc ggaaaccagc acatatggat atctgctccc gaaacaagaa attaacgatt
     2221 agaagaccag cgatactagt tgcactggca cttttactgt gtagttgtaa aagcacgcct
     2281 ccagagtcca tggtgacacc accagcaggt tcaaagccac cagccacgac gcaacaatcg
     2341 tcacaaccga tgcgtggcat ctggctggcc acggtttctc ggctcgactg gccaccggtt
     2401 tcctcggtta acattagtaa ccccaccagc cgggcccgtg tacaacaaca ggcgatgatc
     2461 gacaaactgg atcatctgca acgtctcggc ataaacacgg tctttttcca ggtcaagccg
     2521 gacggtaccg ccctgtggcc atcgaaaatt ttgccgtggt ccgatcttat gaccggtaag
     2581 attggtgaaa atccgggtta cgatccgctg caatttatgc tcgacgaagc ccacaagcgt
     2641 gggatgaaag tacacgcctg gtttaacccc tatcgcgtat cggttaatac gaagcccggt
     2701 actatcaggg aactgaatag cactctgtct caacaaccgg cgagcgtcta tgtgcaacac
     2761 cgtgactgga tcagaacgtc tggcgatcgc tttgtcctcg acccgggcat ccctgaggtt
     2821 caggactgga tcacatcaat agtcgctgaa gtggtttccc gctatccggt agatggcgtg
     2881 cagtttgacg actatttcta tactgaatca ccgggttcac ggctaaatga taacgaaacg
     2941 taccgtaaat acggaggcgc atttgcgtca aaagcagact ggcggcgcaa caatactcag
     3001 cagttaattg caaaggtatc acacaccatt aaaagcatta agccgggagt cgaatttggc
     3061 gttagcccgg caggcgtgtg gcgtaaccga tcacacgatc cgctcggttc cgatacccga
     3121 ggcgcggcag cctatgacga atcctacgct gacacccgtc gatgggtgga acaaggattg
     3181 ctggattaca ttgctcccca aatttactgg ccgttctcac ggagtgccgc gcgttatgac
     3241 gtgttggcaa aatggtgggc ggatgtcgtt aaaccgacca ggacccgcct gtatatcggt
     3301 atcgccttct ataaagtggg tgaaccttca aagatagagc cagactggat gattaacggc
     3361 ggcgtaccgg aactgaaaaa gcagctcgat cttaacgatg cggtaccaga aattagcggc
     3421 accatcttgt tccgtgagga ctatctgaat aaaccgcaga ctcaacaagc ggtcagctat
     3481 ctgcacagtc gttggggcag ttaaactccc attcttactt tgtaacaagc cggtgcttta
     3541 cccaccggct tgttaccctc ttgaactatc ccactactaa tcatgcttac taaagtcaaa
     3601 ttaaccacgc aattaaccac actt
//
LOCUS       DAPGWB010000264         3575 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.267, whole genome shotgun sequence.
ACCESSION   DAPGWB010000264 DAPGWB010000000
VERSION     DAPGWB010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.267"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            31..1986
                     /locus_tag="RHX79_004538"
     CDS             31..1986
                     /locus_tag="RHX79_004538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001485640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV2199615.1"
                     /translation="MDTAEHDGKFAWASFYEAFANALLTWRNRRDELVKGIHLIASGV
                     EGMSHLQDKSIMGEIFPLKDICPFTTMGLFNRNLTDSNRKIIAAKLANLLGVNEPIPD
                     SFAGIPLLNNQKSWFFGYEKSRDPNDIECLWEMFSQAMTFADNQNTNSADFTAAYDIA
                     STVMNVGWNLTMGLYWTRPWFYPTLDSQSQYYIQTVLNIKIIKNGAKGRCSGQSYLSL
                     MRALNEVFTQPNYPVHSFPELSLSAWNTDLSQSKDEVANRTWKASLLNKIKALCLKKN
                     GPYFTASELEENYLDVFKVEHPESKTVTSSIYFYLQKLCNDDELKSLESGNYEYLNFE
                     KNESQTITEETVEESAPLPKLTHVPYDISHLVQDGCFLEEAKIQLTLQRLIDKKNLIL
                     QGPPGTGKTWLARRLAYCLMGEKAPERISAVQFHPNLSYEDFIRGWRPGKEGQLTLID
                     GPFVNAIKTAVNNPTSKYVVIIEEINRGNPAQIFGETLTLMEADKRTPTEALSLSYPK
                     NDDEKIYIPENLYIIGTMNIADRSLALLDLALRRRFAFIDLKPAFNDAWRNWVNYNYA
                     IDFDMLAFIKSRLTVLNDMLAKDVTLGPQFCIGHSYVTPAIGQKINDAQAWYEQVVDT
                     EICPLLAEYWFDAPNKVDEARKVLLAK"
     gene            1983..3104
                     /gene="mcrC"
                     /locus_tag="RHX79_004539"
     CDS             1983..3104
                     /gene="mcrC"
                     /locus_tag="RHX79_004539"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methylcytosine-specific restriction
                     endonuclease system specificity protein McrC"
                     /protein_id="HDV2199616.1"
                     /translation="MTTITGSEQHTASRIPMRNIWMLMLYASDLFRQLGRNQIAVEDN
                     PAEIPDLVATILLHEITLRRRRNLNMGYQTCHAALNRVRGRIDILYTASHQLLERGQV
                     ACHFQDITLNTPRNRYVRCALERLASIIVKPSLAADCHFMAISLRREGINGGYPAPHE
                     LPSVWRFGRHDAADKPMVDAARLAFELLMPTEDQGQYLLPAPSNNLYWMRRLFEKGIA
                     GLYRVHLAKTTWQVSAGKELKWALSDQSAGSAEIFPTMKSDIILEHKTAQRRIIIDTK
                     FNSILTKGWHREQSLRNGYIYQLYTYLRTQENKTDPLSLNAAGLLLHPAVGYMLNEYV
                     VTQGHKIHFATVDMTVDAKAIKKQLLAIAHDCAGVAVDD"
BASE COUNT         1039 a          773 c          792 g          971 t
ORIGIN      
        1 tcattgctca acaagtataa tggagttccc gtggatacag cagaacatga tggcaaattt
       61 gcttgggcta gtttttatga ggcttttgcc aacgcgttac tgacttggcg aaatcgtaga
      121 gatgaattag tcaaaggtat tcatctaatt gcctcaggtg tggaaggaat gtcccatctg
      181 caggacaaat ctattatggg agagatcttt cccttaaaag acatttgtcc gtttactact
      241 atgggcttgt tcaatcgtaa cttgaccgac agcaatcgca aaattattgc tgccaagcta
      301 gcgaatttgt tgggcgtgaa cgaaccgatt cctgactcct ttgccggaat cccgctgttg
      361 aataaccaaa aatcttggtt ctttggttat gaaaagtcac gcgaccctaa tgacattgaa
      421 tgcttgtggg aaatgttctc gcaggcaatg acctttgcgg ataaccagaa tactaactct
      481 gcagacttca ctgccgcata tgacattgct tctacagtaa tgaatgtcgg ttggaatctc
      541 accatggggt tgtactggac ccgtccttgg ttctacccta ctttagatag ccagtcgcag
      601 tattacattc agacagtgtt aaacattaag atcattaaaa acggggcaaa aggtcgctgt
      661 agtggacaaa gttacctgag tcttatgcgg gcgctgaacg aggtctttac ccaaccaaac
      721 tatccggttc attctttccc agaactttct ttatcagcgt ggaatacaga tcttagccag
      781 tctaaagatg aggtggcaaa tagaacgtgg aaagcctctt tactgaataa aattaaggcg
      841 ttatgcctga aaaaaaatgg cccttatttc actgcttcgg agttggaaga aaactacttg
      901 gacgtattca aggtagagca tcctgagagc aaaacagtta caagctcaat ctacttttat
      961 ctacagaaac tatgcaatga tgatgagtta aagtcccttg agtccggaaa ttatgaatac
     1021 ctgaattttg agaaaaatga atcccagacg ataactgagg aaactgtcga agagagtgcg
     1081 ccgttgccaa aactcactca cgttccttat gacatcagtc atctggtgca ggatggctgt
     1141 ttcttggaag aggctaagat ccaactcaca cttcagcgcc tgatcgacaa gaaaaacctg
     1201 atattacaag gaccacccgg aactggaaaa acctggttag cgcgacgtct ggcgtactgc
     1261 ttgatgggag aaaaagcacc tgagcgtatt agcgcggtgc aatttcaccc gaacctctct
     1321 tacgaagact ttattcgcgg ctggcgtcca ggtaaagaag ggcaattgac gctaattgat
     1381 ggaccttttg taaatgcaat caaaactgca gtcaataatc ctacctcgaa atatgtggtg
     1441 ataattgaag agattaatcg tggcaatccg gcgcaaatct tcggtgaaac actcacgttg
     1501 atggaagcag ataaacgcac gccgactgag gcattatctc tttcctatcc taaaaatgat
     1561 gatgaaaaaa tatacattcc tgagaatcta tatatcatcg gtacgatgaa tattgcagac
     1621 cgctcactcg cactacttga cctagcgctg cgccgtcgtt tcgcgtttat cgatctaaag
     1681 ccagctttta atgacgcgtg gagaaactgg gtaaattata attacgcaat tgattttgac
     1741 atgttagcat tcatcaaatc tcgactgacg gtacttaacg atatgctggc aaaagatgtt
     1801 accttaggac cacagttttg tatcggtcac agctatgtca ccccagctat cggccaaaaa
     1861 atcaacgatg cccaggcttg gtatgaacaa gtcgttgata cagagatctg ccctttgctc
     1921 gccgaatatt ggttcgatgc tccaaataaa gtcgatgaag ccagaaaagt gttattagca
     1981 aaatgacgac aataaccggg agtgagcaac atacagcatc acgtattccc atgcgaaata
     2041 tctggatgct gatgctgtac gcttcagatc tgtttcgtca gttagggcgc aatcagatcg
     2101 cagtagaaga taacccagca gaaatccccg acctggtggc gacaatcctc cttcatgaga
     2161 ttacgctgcg ccgacgtcgc aatttaaata tgggatacca aacttgtcat gcggccctga
     2221 accgagtgag agggcgcatt gacatactgt atactgccag tcatcaacta ctggaacggg
     2281 gacaggttgc ctgccatttt caagacataa ccctcaacac cccccgaaat cgctatgttc
     2341 gctgtgcgtt agaacgtctg gcctcaatca tagtgaaacc gtctttggcg gcagattgcc
     2401 attttatggc aatatcactt cgccgtgagg ggataaatgg aggatatcct gccccccacg
     2461 aattaccctc agtgtggcgt tttggacgcc atgatgccgc agataaaccg atggtcgatg
     2521 ccgcacgatt agcttttgaa ctgctgatgc cgaccgaaga tcaaggccaa tatcttttac
     2581 ctgcgccctc aaataacctt tactggatga gaagactatt tgaaaaaggt atcgctggct
     2641 tatatcgtgt acaccttgcc aaaacaactt ggcaggtctc tgcagggaaa gagctgaaat
     2701 gggcgttgag cgatcaaagt gcaggtagtg cagagatttt cccgacaatg aagtcagaca
     2761 ttattctgga acacaagact gcccagcggc gtattattat cgataccaaa tttaattcga
     2821 ttctgacaaa gggttggcat cgggagcaat cactacgtaa tggctatatt tatcagctat
     2881 atacctacct tagaacacag gagaacaaga cggatccgct ttcgctcaat gccgctggtc
     2941 ttctacttca tccagctgtt ggctatatgc ttaatgagta tgttgtcact cagggacata
     3001 agatccattt tgctacagta gatatgacgg tagatgctaa agcaattaaa aaacaattgc
     3061 tggcaatagc ccatgattgt gcaggagtcg cggttgatga ctaaccatcc tataaggcat
     3121 tggctgtaat ataattaata gtttcaatta agtagctgtt atccgtgctt agtcatcata
     3181 tgacgcacca cggtctaatt ttcctgctca tacattgata tatccttgtc gtgcccggaa
     3241 agtcgcagtc cactttgagg tataccgatt gccagcacca aaagcttctt tgtgattatt
     3301 atatcgggga atgtctattt ttttagtgac aatatcagat agcaattaat aagcggtgcc
     3361 ggtaatggat gttatgttta atgtatagac acagccatca taaactaaac gtctgttgtt
     3421 cgctcataac cgacatttat ctcagttatg gaagataatt atgtatgcag ataatggggc
     3481 agacagtcgt ggagtaaaca aggttttgca ctgcttggcg gcatcgttat cttattttta
     3541 attatgtgcc tcttaacata agttgggaca aaaca
//
LOCUS       DAPGWB010000265         3507 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.268, whole genome shotgun sequence.
ACCESSION   DAPGWB010000265 DAPGWB010000000
VERSION     DAPGWB010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3507
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.268"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(121..873)
                     /gene="yecC"
                     /locus_tag="RHX79_004540"
     CDS             complement(121..873)
                     /gene="yecC"
                     /locus_tag="RHX79_004540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine ABC transporter ATP-binding protein
                     YecC"
                     /protein_id="HDV2199617.1"
                     /translation="MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTT
                     LLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTV
                     LENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
                     MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMD
                     QGRIVEQGAAKALFADPQQPRTRQFLEKFLLQ"
     gene            complement(870..1538)
                     /gene="tcyL"
                     /locus_tag="RHX79_004541"
     CDS             complement(870..1538)
                     /gene="tcyL"
                     /locus_tag="RHX79_004541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter permease"
                     /protein_id="HDV2199618.1"
                     /translation="MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMR
                     LSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAY
                     AAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDT
                     SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQE
                     REPK"
     gene            complement(1553..2539)
                     /gene="dcyD"
                     /locus_tag="RHX79_004542"
     CDS             complement(1553..2539)
                     /gene="dcyD"
                     /locus_tag="RHX79_004542"
                     /EC_number="4.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-cysteine desulfhydrase"
                     /protein_id="HDV2199619.1"
                     /translation="MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTP
                     MAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENP
                     IGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGG
                     SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGV
                     TVSRSVADQLPKVVNLQQAIAKELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLA
                     RLEGILLDPVYTGKAMAGLIGGISQKRFKDEGPILFIHTGGAPALFAYHPHV"
     gene            complement(2644..3444)
                     /gene="tcyJ"
                     /locus_tag="RHX79_004543"
     CDS             complement(2644..3444)
                     /gene="tcyJ"
                     /locus_tag="RHX79_004543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV2199620.1"
                     /translation="MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLL
                     VGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRID
                     VVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNY
                     EEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEA
                     FSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKWFGADVTK"
BASE COUNT          830 a          992 c          839 g          846 t
ORIGIN      
        1 tgcaagccat cgcattctct tatgttatta atgagttatg ctgatttgtt aagcagtttt
       61 atcacgcttg aaatggcgtc ccgccccgac aggtgaatcg tcggggctga ttttttctta
      121 ttattgcagc agaaacttct cgaggaactg gcgggtgcga ggctgctggg gatcagcaaa
      181 taacgctttt gctgccccct gctcgactat ccgcccctgg tccataaaaa tcgcccggtc
      241 cgcaacatcc cgggcaaagc tcatttcgtg cgtcacaatc accatcgtgc gcttttcctg
      301 cgccagctgg cggattgtgt tcaggacttc gcccaccagc tctggatcca gcgctgacgt
      361 tggctcgtca aacaaaatca cctcaggacg cattgccagc gcacgcgcaa tcgcaacacg
      421 ctgctgttga ccgccagaca aacgacgtgg atagctggtt tctttaccgg ccagcccaac
      481 tttcgccagc agctcgcgag cgcgcgccgt ggcctcttct ttcggttcgc ctttgacgat
      541 caccggccct tcaataatgt tttccagcac cgtacgatgc ggaaacaaat taaagttctg
      601 gaagacaaac ccgacgtgct gacgcaactg gcgaatcagc gatttttgct gacttaatga
      661 acgtgcagta tcaatagtga tatcgccaac ggtgatcgtt cccgcttccg gttgttccag
      721 cagatttatg ctgcgtagca acgtggtttt gccggaacca ctcggaccga taattgccac
      781 cacttcgcca ggctttacct cgaggtcgat accgtgcagc accgtctgac cgtgaaattt
      841 tttcaccagg ttcttaactt caatggcact cattttggtt ctctctcctg gcgattaagt
      901 tgattctcaa aatggttctg caacgtcgat aatactgtcg ccatgatcca gtagatgagc
      961 gaagccgcca ggtacatggt gaacacctcc agcgtgcgcg aggtaatcaa ctgcgcctga
     1021 cggaacagct ccggcacctg gattgtcgcg gccagcgacg tatcttttac cagactgata
     1081 aagctgttcg acagcggcgg caacgccacc cgcgccgcct gtggcaaaat cgcgcgacgc
     1141 atggtctgcc acggcgtcat accaatactg gcagcggctt cccactgacc tttatcaata
     1201 gaagaaatgg cggcgcgcag cgtttcggcg gcataggcgg cagtgttcag cgacagacca
     1261 atcattgctg acggaatggg atctaattcg ataccaaact gcggcaggcc gtaatagatc
     1321 ataaacagtt gtgcgatgag cggcgtacca cgaaaaatag agatataaaa acgcgccagc
     1381 cagcgcacgg gccagattgg cgacaggcgc atcagcgcga gaataaaccc gagcagtaag
     1441 ccaaaaaaca tgccgccgat actgagttgc agcgtatacc cagccccttt caacaggaac
     1501 ggcaaggaat caataaccag ttgtatactt tcttgcatga gcgttcccgg agctaaacgt
     1561 ggggatgata ggcgaacagc gcaggcgcac cgccggtatg aataaacaga atcggccctt
     1621 catctttgaa gcgtttctga ctgataccgc caatcagccc cgccatcgct tttccggtat
     1681 acacaggatc aagcagaatg ccttccagcc gcgccagcaa tttcactgct tccatgcctt
     1741 cgtcgttcgg cacgccgtag ccaggtgcaa aatagtcatc ccagagtaaa atttccgctg
     1801 atgcggtcag ctccagttct ttcgcaatcg cctgttgtag gttaaccact ttcggcaact
     1861 gatcggcaac ggaacgcgac acggtcacgc caatcagttc gctttcaggc atcaggtgtt
     1921 ccagcccaac agccagtccg gcgtgagttc cggcactgcc cgatgcgact accaccgacg
     1981 aaatattaac cgccccttca cactgttgcg cgatttccag cgcactctcc acataaccta
     2041 gcgcgccaag agcattagaa ccgccaaccg gaatgacata cgggcgaaag ccttgtgctt
     2101 cgactcgcgt cgccagctct tccagttggg cattgggatc ggtcagtgca tcgcacattt
     2161 caatctgggt attgaacaga tccagcaaca aacgattgcc gttggttaaa tagttttctg
     2221 cggttgtgcc aataggattt tccagcagcg ccacgcagtg cagaccgagt ttcgccgcga
     2281 ctgcggcagt ctggcgcaca tggttagact ggatcgcgcc ggcagtaatc agcgtatcgg
     2341 caccttcgcg cagggcatct gccgcgagaa attccagctt acgtaattta ttgccgccca
     2401 ttgccatggg tgtgacgtca tcccgtttga tgaaaatttc ccgtccaaga taatcagaaa
     2461 agcgcggcag atattcgagc ggcgttggcg cgccgataaa ctccaaccgt ggaaaacggg
     2521 ttaaattatg cagtggcata acagcctccg atgtgtgttg ttgtgatttt cttattatgc
     2581 acgctgaaaa cgcgtaaata aaaaaggcgc tagtgaaagc gccctttttt gtcattatgc
     2641 tgattatttg gtcacatcag caccaaacca tttttcggaa agagcttgca gagtgccgtc
     2701 tttttgcatt tccgcaattg catcattcac cgctttcagc aggtcttcat ttcctttacg
     2761 cagcgccacg ccagactcct gacgggagaa tgcttcaccg gttactgcca gcgtatcgtt
     2821 ggttttcttc accagatcca gcgccgccag acgatcaacg aggatcgcat cgatacggcc
     2881 tacgcgcaga tcctgatatt tggtcgggtc atcatcatag gtacgcacat cgacgccctg
     2941 aacattctgc cgcagccact cttcatagtt ggtgcccaga ccgacaccca cttttttgcc
     3001 tttcagatca gcagccgttt taatggtgcc ttcgttacct tttttcacca gcgcctgaat
     3061 accggaaatg gtgtaagggg tagagaaatc gtattttttc ttgcgctcgt cagaaatggt
     3121 gacctgatta atcaccacat caatgcgttt agagtccagc gacgccagca taccgtccca
     3181 tttggtcggt tttagtgacg cctcaacgcc aagatgtttt gccagctgtt gggcaaattc
     3241 cacttcaaaa ccggttaatt tgccgtcatc cccctgaaaa ctgaacggcg gataagttcc
     3301 ttccagccct accagcagcg tgccgcgctc tttgacttta ttaagcagac cttcatctgc
     3361 aaaactttta acgctcatgc ccgcaaccag cgccacggcc atcacaccca tcaatgcctg
     3421 acgtcccaga tgtgctaatt tcatattcac cccgaatgtt gttatgtctg tttgcagtgt
     3481 agagccattg tttgtaaaca caaaaac
//
LOCUS       DAPGWB010000266         3438 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.269, whole genome shotgun sequence.
ACCESSION   DAPGWB010000266 DAPGWB010000000
VERSION     DAPGWB010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3438
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.269"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            403..1719
                     /gene="shiA"
                     /locus_tag="RHX79_004544"
     CDS             403..1719
                     /gene="shiA"
                     /locus_tag="RHX79_004544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate transporter"
                     /protein_id="HDV2199621.1"
                     /translation="MDSTLISTRPDEGTLSLSRARRAALGSFAGAVVDWYDFLLYGIT
                     AALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVW
                     MMGIATALIGILPSFSTIGWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPENKKA
                     FYSSGVQVGYGVGLLLSTGLVSLISMMTTDDQFLSWGWRIPFLFSIVLVLGALWVRNG
                     MEESAEFEQQQHNQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNY
                     STQNMGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFF
                     MALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVG
                     GGFTPFIAAALITYFAGNWHSVAIYLLAGCLISAMTALLMKDNQRA"
     gene            1821..3275
                     /gene="amn"
                     /locus_tag="RHX79_004545"
     CDS             1821..3275
                     /gene="amn"
                     /locus_tag="RHX79_004545"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HDV2199622.1"
                     /translation="MNNKGSGLTPAQALDKLDALYEQSVVALRNAIGNYITSGELPDE
                     NARKQGLFVYPSLTVTWDGSTTNPPKTRAFGRFTHAGSYTTTITRPTLFRSYLNEQLT
                     LLYQDYGAHISVQPSQHEIPYPYVIDGSELTLDRSMSAGLTRYFPTTELAQIGDETAD
                     GIYHPTEFSPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGC
                     SQILDPDSPYIALSCAGGNWITAETEAPEEAISDLAWKKHQMPAWHLITADGQGITLV
                     NIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAV
                     LPPDIPIPSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSASAL
                     RFNLSRAVAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAIS
                     EHLQIGIRAIDLLRAEGDRLHSRKLRTFNEPPFR"
BASE COUNT          806 a          837 c          817 g          978 t
ORIGIN      
        1 caaagtctgt tttttcaata ttgaaattat aagctttata atcgtagtaa ctaaatgcaa
       61 tacgtctcaa caatgatgct aaaaacatac ctaacctcgc ctccctactg gttataatac
      121 aatgcagtct atcagactca tcagggtgcc attttgtgca tatgcggact tttatgtttc
      181 atatctctaa cctgtgggtc ctctgcttaa tccttaaaca acaccagcaa ctcctgcgct
      241 ttcatcttcc atcgaatttt tcatgttgcc gctaatcagc cataaaaaca tttgcagatg
      301 cgctctgtcg aggtagtctc ataaggttcg tttatagatc gacggcaatg tgagttacct
      361 tttccatact aattataaaa agacagtaca aacaggatca ttatggactc cacgctcatc
      421 tccactcgtc ccgatgaagg gacgctttcg ttaagtcgcg cccgacgagc tgcgttaggc
      481 agcttcgctg gtgccgtcgt cgactggtat gattttttac tctatggcat caccgccgca
      541 ctggtgttta atcgcgagtt tttcccgcaa gtaagcccgg cgatgggaac gctcgccgca
      601 tttgccacct ttggcgtcgg attccttttc cgtccgctcg gcggtgtcat tttcggtcac
      661 tttggcgacc gactgggacg taagcgcatg ttaatgctga ccgtctggat gatgggcatc
      721 gcgacagcct tgattggtat tcttccttca ttctcgacca ttgggtggtg ggcacctatt
      781 ttgctggtga cactgcgtgc cattcaggga tttgccgtcg gcggcgaatg gggaggcgcg
      841 gcgttgcttt ccgttgaaag tgcgccggaa aataaaaaag ccttttacag tagcggtgta
      901 caagttggct acggagtagg tttactgctt tcaaccggac tggtttcatt gatcagtatg
      961 atgacaactg acgatcagtt tttaagctgg ggctggcgca ttcctttcct atttagcatc
     1021 gtactggtac tgggagcatt gtgggtgcgc aatggcatgg aagagtccgc ggaatttgaa
     1081 caacagcaac ataatcaagc ggccgcgaaa aaacgcatcc cggttatcga agcgctgtta
     1141 cgacatcccg gtgctttcct gaagattatt gcgctacgac tgtgcgaatt gctgacgatg
     1201 tacatcgtta ctgcctttgc acttaattat tcaacccaga atatggggtt accgcgcgaa
     1261 cttttcctta atattggttt gctggtaggt ggattaagct gcttgacaat tccctgtttt
     1321 gcctggcttg ccgatcgttt tggtcgccgc agggtttata tcacaggtgc gttaatcgga
     1381 acgttgagcg catttccttt ctttatggcg cttgaagcac aatctatttt ctggatagtt
     1441 ttcttctcca taatgctggc aaacattgcg catgacatgg tggtgtgtgt gcaacaaccg
     1501 atgtttaccg aaatgtttgg tgccagttat cgctatagtg gtgctggagt cggttatcag
     1561 gtcgccagtg tggttggcgg tggatttaca ccttttattg ccgctgcact catcacttac
     1621 tttgccggga actggcatag cgtcgccatt tatttgctgg ctggatgtct gatttccgca
     1681 atgaccgctt tgttgatgaa agacaatcaa cgcgcttgat agtctggcga agatcatccg
     1741 atcttcgcct tacacttttg tttcacattc ctgtgacata ctatcggatg tgcggtaatt
     1801 gtatggaaca ggagacacac atgaataata agggctccgg tctgacccca gctcaggcac
     1861 tggataaact cgacgcgctg tatgagcaat ctgtagtcgc attacgcaac gccattggca
     1921 actatattac aagtggcgaa ttacctgatg aaaacgcccg caaacaaggt ctttttgtct
     1981 atccatcact gaccgtaacc tgggacggta gcacaaccaa tccccccaaa acgcgcgcat
     2041 ttggtcgttt tactcacgca ggcagctaca ccaccacgat tactcgccct actctctttc
     2101 gttcgtatct caatgaacaa cttacgttgc tgtatcagga ttatggtgcg catatctcgg
     2161 tgcaaccctc gcagcatgaa atcccctatc cttatgtcat cgatggctct gaattgacac
     2221 ttgatcgctc aatgagcgct gggttaactc gctacttccc gacaacagaa ctggcgcaaa
     2281 ttggcgatga aactgcagac ggcatttatc atccaactga attctccccg ctatcgcatt
     2341 ttgatgcgcg ccgcgtcgat ttttccctcg cgcggttgcg ccattatacc ggtacgccag
     2401 ttgaacattt tcagccgttc gtcttgttta ccaactacac acgttatgtg gatgaattcg
     2461 ttcgttgggg atgcagccag atcctcgatc ctgatagtcc ctacattgcc ctttcttgtg
     2521 ctggcgggaa ctggatcacc gccgaaaccg aagcgccaga agaagccatt tccgaccttg
     2581 catggaaaaa acatcagatg ccagcatggc atttaattac cgccgatggt caaggtatta
     2641 ctctggtgaa tattggcgtg ggaccgtcaa atgctaaaac catctgcgat catctggcag
     2701 tgctacgccc ggatgtctgg ttgatgattg gtcactgtgg cggattacgt gaaagtcagg
     2761 ccattggcga ttatgtactt gcacacgctt atttacgcga tgaccacgtt cttgatgcgg
     2821 ttctgccgcc cgatattcct attccgagca ttgctgaagt gcaacgtgcg ctttatgacg
     2881 ccaccaagct ggtgagcggc aggcccggtg aggaagtcaa acagcggcta cgtactggta
     2941 ctgtggtaac cacagatgac aggaactggg aattacgtta ctcagcttct gcacttcgtt
     3001 ttaacttaag ccgggccgta gcaattgata tggaaagtgc aaccattgcc gcgcaaggat
     3061 atcgtttccg cgtgccatac gggacactac tgtgtgtttc agataaaccg ttgcatggcg
     3121 agattaaact tcccggccag gctaaccgtt tttatgaagg cgctatttcc gaacatctgc
     3181 aaattggcat tcgggcgatc gatttgctgc gcgcagaagg cgaccgactg cattcgcgta
     3241 aattacgaac ctttaatgag ccgccgttcc gataataagt tctgaacctt cttatcagaa
     3301 atagatgtga aggagtaagt aagacaccta gcaaatagcc tgcaataatc gtgggctgtt
     3361 tgcttccttg ggcggatacg tgttttatta tcgtcttaat gatttccaca tattaaaagc
     3421 aagtatgctt tcaaaaca
//
LOCUS       DAPGWB010000267         3388 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.270, whole genome shotgun sequence.
ACCESSION   DAPGWB010000267 DAPGWB010000000
VERSION     DAPGWB010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3388
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.270"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..795
                     /gene="lamB"
                     /locus_tag="RHX79_004546"
                     /pseudo
     CDS             1..795
                     /gene="lamB"
                     /locus_tag="RHX79_004546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418460.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="maltoporin LamB"
     gene            complement(830..1312)
                     /locus_tag="RHX79_004547"
     CDS             complement(830..1312)
                     /locus_tag="RHX79_004547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001402899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199623.1"
                     /translation="MRNKTREAMRLFLGGRCYTAEKLEKDYLAEVANYSNDRWEAPQR
                     AARLAASVKRYKTSEMLRFIFATIAYDPDPDLTPLTVRRLCKALFGRTGSQWLVVEVF
                     GEKGRQHRSADSNPEMVEKMAARYRHAAELHWSATLAEIERVKRLYQTKIKKSKKEVG
                     "
     gene            complement(1429..2277)
                     /locus_tag="RHX79_004548"
     CDS             complement(1429..2277)
                     /locus_tag="RHX79_004548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001057990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDV2199624.1"
                     /translation="MNNDELVTRRAQAIAEDRCFSKGRLRDEFRMKPAPGAEPVKWYK
                     NTYGGRFAVYRIADCVPMREKRPLTSKQQLAGQRLSVLSRLNSTSGRMARQAYDWLSL
                     APLFLDTETTGLDNTAEALEIGLTDAAGQVVFETRLKPTVAIGAQAAAVHGISEQALC
                     GAPSWTDMARQLRHAIGDRPVIIFNARFDIRILKQTAAAHSDPADWLEEMTVYCAMEL
                     AAGYYGATNRYGTISLASAASQAGLTWEGLAHSAIVDARMAAGVVNAIAAYHLELLQE
                     QARLKI"
     gene            complement(2323..2604)
                     /locus_tag="RHX79_004549"
     CDS             complement(2323..2604)
                     /locus_tag="RHX79_004549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001585073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDV2199625.1"
                     /translation="MMEIFWTILASQDRKRIREYIAEQNLMAAIELDERIGYSASSLA
                     GQPYKGRNGRVEGTRELVIHPHFVLVYEVDSQWGKVYILRVLHTAQKWP"
     gene            complement(2601..2870)
                     /locus_tag="RHX79_004550"
     CDS             complement(2601..2870)
                     /locus_tag="RHX79_004550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199626.1"
                     /translation="MAQVNMSLRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQ
                     HNTWFRDQVAAGRQQLERGDVLPHDMVESSATAWRDEISRKVAGK"
BASE COUNT          766 a          930 c          845 g          847 t
ORIGIN      
        1 caacagaatg actgggaagc taccgatccg gccttccgtg aagcaaacgt gcagggtaaa
       61 aacctgatcg aatggctgcc aggctccacc atctgggcag gtaagcgctt ctaccaacgt
      121 catgacgttc atatgatcga cttctactac tgggatattt ctggtcctgg tgccggtctg
      181 gaaaacatcg atgttggctt cggtaaactc tctctggcag caacccgctc ctctgaagca
      241 ggtggttctt cctctttcgc cagcaacaat atttatgact ataccaacga aaccgcgaac
      301 gacgttttcg atgtgcgttt agcgcagatg gaaatcaatc cgggcggcac attagaactg
      361 ggtgtcgact acggtcgtgc caacctgcgt gataactatc gtctggttga tggcgcatcg
      421 aaagacggct ggttgttcac tgctgaacat actcagagtg tcctgaaggg ctttaacaag
      481 tttgttgttc agtacgctac tgactcgatg acctcgcagg gtaaaggtct gtcgcagggt
      541 tctggcgtcg cgtttgataa cgaaaaattt gcctacaata tcaacaacaa cggtcacatg
      601 ctgcgtatcc tcgaccacgg agcgatctcc atgggcgaca actgggacat gatgtacgtg
      661 ggtatgtacc aggatatcaa ctgggataac gacaacggca ccaagtggtg gaccgtcggt
      721 attcgcccga tgtacaagtg gacgccaatc atgagcaccg tgatggaaat cggctacgac
      781 aacgtcgaat cccagcatta atgatgaagg aaaagaataa caatggcagt caacccactt
      841 cttttttgga tttcttaatt ttcgtctgat aaagccgctt tacccgttca atttctgcca
      901 gcgttgcgga ccagtgtagt tcggcggcat gacgatatct ggcagccatt ttttccacca
      961 tctccggatt gctgtccgcg ctgcggtgct gacgcccctt ctccccaaaa acttcaacaa
     1021 ccagccactg gcttccggtt ctgccgaaca atgccttgca caaacgtctc acagtcagcg
     1081 gggttaaatc tggatcggga tcataggcaa tggtagcaaa aataaagcgc agcatttctg
     1141 atgtcttgta acgctttacg ctggcagcca ggcgtgcggc acgttgcggt gcttcccagc
     1201 ggtcgttact gtaattagcc acttcagcca gataatcctt ttcaagtttt tcagccgtgt
     1261 agcacctgcc gcctaaaaaa agccgcatgg cctccctggt tttatttctc acatatcatc
     1321 cctcattaat gctaatgtac gcatacatta gcattaacat gctgacagta acaagcggcg
     1381 gatttacgtc tggataacgt aaatgattgc ggtatacagg ccaggcggtc agattttcag
     1441 ccgtgcctgt tcctgcagca gttccagatg atatgcagca atagcgttta ccacccctgc
     1501 cgccatccgt gcgtcgacga tcgctgagtg tgccagccct tcccaggtca gtccggcctg
     1561 gctggcagca ctggccagtg aaatcgtgcc atagcggttg gtggccccat aatatcctgc
     1621 agccagctcc atcgcacaat ataccgtcat ttcttccagc cagtcagccg gatcgctatg
     1681 tgcggccgca gtctgtttca gaatgcggat gtcgaaccgg gcattaaaga taattactgg
     1741 tcgatctccg attgcatgcc gcagttgccg cgccatatct gtccatgatg gtgcgccgca
     1801 aagagcctgc tcactgatac catgcacggc ggcggcctgc gccccgatgg cgaccgtggg
     1861 cttcagcctg gtttcaaata ccacctgacc ggccgcatcg gtcaggccga tttccagggc
     1921 ttccgcggta ttatccagtc ctgtcgtttc agtatccaga aagagtggtg ccagactcag
     1981 ccagtcatat gcctgccgtg ccatccggcc actggtgctg tttagccggg ataaaacgga
     2041 aagccgctgg ccagccagct gttgtttact cgtcagaggg cgtttctcac gcatcggaac
     2101 acagtctgca attcggtata cagcgaacct gccaccataa gtatttttat accacttaac
     2161 cggctcagca ccgggggctg gcttcattct gaattcatcg cgcagacgtc ctttcgagaa
     2221 acacctgtct tcggcaatcg cctgcgcacg tctggtgacc agctcatcat tattcatggt
     2281 tcttgcatct ccgtcagacg tttttatatc cggacagccc ctctatggcc acttctgtgc
     2341 agtatgcaat actcgcagga tatacacttt tccccactgg ctgtcgacct cataaaccag
     2401 aacaaaatgc gggtgaataa ccagttcccg ggtaccttcc acacgaccgt tgcggccttt
     2461 atacggctgc ccggccaggc tgctggctga ataaccaatc cgttcgtcca gttcaatggc
     2521 agccatcagg ttctgctccg caatatactc acgaatgcgc ttcctgtcct ggctggccag
     2581 tatggtccag aatatctcca tcatttaccg gcgaccttcc tgcttatttc atcccgccat
     2641 gcagtagcgg aggattcgac catatcatgg ggaagcacat cgccgcgttc gagttgctga
     2701 cgtcctgccg caacctggtc acggaaccaa gtattatgct gccgttcaac ggtctggcgc
     2761 ataaaatccc gaattaactg agagccatta cggtccatgc tttttgcagc ggccataaaa
     2821 gcatccttca gttcagcgtc gattcttaaa ctcatattaa cctgtgccat ttatcacctc
     2881 gtcattacta cgtatataca cagtatataa cgattcagat atcgtcacca ggatatgccg
     2941 cgccagcggc atggaaggcg gcactccgtt gttgcatatg gcacaggagt aaaaccgccg
     3001 aagcccggcg taagccggta ctgattgata gatttcacct tacccatccc cagtcctgct
     3061 aagccatacc cgttttcagc catgatagag cttctgtgcg cggtcggagt ggtcccgacg
     3121 agggtttacc cgaagtcggg gcgtatctcc gcgttagcgg gccgtgaggg ccgcttacga
     3181 gcgtgtactg agaacttcca gcgagaagac tgacagcgat gaagatgtag ttacaacatt
     3241 cataattaaa agcgactctg ttccggccct ttgggccggg gcggggccgc ttttcagtta
     3301 tgagggaggg gctttgtggt ttcggttctg cgctggaccg gggtttttct ggaggttgtt
     3361 tttgtgtgtt gtaactaaag tggctccg
//
LOCUS       DAPGWB010000268         3331 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.271, whole genome shotgun sequence.
ACCESSION   DAPGWB010000268 DAPGWB010000000
VERSION     DAPGWB010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3331
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.271"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            121..639
                     /locus_tag="RHX79_004551"
     CDS             121..639
                     /locus_tag="RHX79_004551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hcp family type VI secretion system effector"
                     /protein_id="HDV2199627.1"
                     /translation="MPTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEF
                     LHNVTVPTDPQSGQPAGQRAHKPFIFTVALNKAVPLMYNALASGEMLPTTELHWWRTS
                     VEGKQEHYFTTRLTDSTIVDMKLHMPHCQDPAKREFTQLLEVSLAYRKIEWEHVKSGT
                     SGADDWRAPLEA"
     gene            849..2990
                     /locus_tag="RHX79_004552"
     CDS             849..2990
                     /locus_tag="RHX79_004552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
                     /protein_id="HDV2199628.1"
                     /translation="MSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQ
                     FLSLEFQQILDKMAYLTIWQGDDVQRRVKGMVTWFELGENDKNQMLYSMKVCPPLWRT
                     GLRQNFRIFQNEDIESILGTILQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRM
                     AAEEGIFFYEEHAQKSTDQSLVLCDTVRYLPESFEIPWNPNTRTEVSTLCISQFRYSA
                     QIRPSSVVTKDYTFKRPGWAGRFDQEGQYQDYQRTQYEVYDYPGRFKGAHGQNFARWQ
                     MDGWRNNAEVARGTSRSPEIWPGRRIVLTGHPQANLNREWQVVASDLHGEQPQAVPGR
                     RGSGTTLDNHFAVIPADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKF
                     NWDRYNPSNQESSCWIRVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIIMGRTY
                     HQENRTPGSLPGTKTQMTIRSKTYKGSGFNELKFDDATGKEQVYIHAQKNMNTEVLNN
                     RTTDVINNHAEKIGNNQAITVTNNQIQNIGVNQIQTVGVNQVETVGSNQIIKVGSNQV
                     EKVGIIRALTVGVAYQTTVGGIMNTSVALLQSSQVGLHKSLMVGMGYSVNVGNNVTFS
                     VGKTMKENTGQTAVYSAGEHLELCCGKARLVLTKDGSIFLNGTHIHLEGESDVNGDAP
                     VINWNCGATQPVPDAPVPKDLPPGMPDMRQF"
     gene            3066..>3331
                     /locus_tag="RHX79_004553"
     CDS             3066..>3331
                     /locus_tag="RHX79_004553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308264.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HDV2199629.1"
                     /translation="MGGKPAARQGDMTRKGLDIVQGSAGVLIGAPTGVACSVCPGGIT
                     YANPVNPLLGAKVLPGETDLALPGPLPFILSRAYSSYRTRTPAPV"
BASE COUNT          811 a          856 c          978 g          686 t
ORIGIN      
        1 ttgtatgtaa aaaatactga aaaatgatgc ggttccgtga agtgagctgc atctgcctgt
       61 ctgggattaa cggcaggtca ttgtaagtag taattaacca cgttaacaag gagtttacaa
      121 atgccaacac cgtgttatat ctccatcact ggtcagaccc agggaaatat tactgcaggt
      181 gcatttaccg ctgattctgt cggcaacatc tatgtgcagg ggcacgaaga cgagatgctg
      241 gtgcaggaat tcctgcataa cgttactgtc ccgaccgatc ctcagtccgg ccagcctgcg
      301 ggtcagcgtg ctcacaagcc gttcattttt accgtggcgc tgaacaaagc ggttccgctg
      361 atgtacaacg cactggcctc cggcgaaatg ctgccaacca ctgaacttca ctggtggcgt
      421 acctctgtgg aaggcaaaca ggagcattat ttcactaccc gcctgactga ttcgacgatt
      481 gtcgatatga aactgcatat gccgcattgc caggacccgg cgaaacgcga gttcacccag
      541 ttgctcgaag tttcactggc ctaccgcaaa attgaatggg aacacgtcaa atctggcacc
      601 tccggtgccg acgactggcg cgcaccgctg gaagcataag ttaagccaac agcatccggc
      661 tatcaggccg gatgctgttt ttgtattacg ccgtagaaag aaaggttgtc agtaaggggt
      721 tacgttcacg ggagatggcg gctgccggaa acttcggcgg tagcgtgcct gaacgcaagc
      781 gtaacactgt actgtcacag ccgctttaac agcgaactgt ctgtttttcc ttaaccccgg
      841 aggttgctat gtcaaccgga ttacgtttca cgctggaagt ggacggcctg ccaccggatg
      901 cttttgcggt ggtctccttt catctgaacc agtcactctc ttcgcttttt tccctcgatc
      961 tctctctggt cagccagcag tttctctccc ttgaattcca gcagatcctc gacaaaatgg
     1021 cctacctgac gatatggcag ggcgatgacg tacagcgccg ggtgaaaggt atggtgacct
     1081 ggtttgaact gggggagaac gacaaaaacc agatgctgta cagcatgaag gtgtgcccac
     1141 cgctgtggcg cacagggctg cgccagaact tccgtatctt ccagaatgag gacatcgaaa
     1201 gcatcctcgg cacgatattg caggaaaacg gggtgaccga gtggagcccg ctgttcagcg
     1261 agccacatcc ttcccgtgag ttttgtgtcc agtatggtga gactgattac gatttcctgt
     1321 gccggatggc ggcggaggaa ggcatcttct tttatgagga gcacgcgcaa aaaagtaccg
     1381 accagagcct ggtcctatgc gataccgtgc gttatctgcc ggagtccttt gagatcccct
     1441 ggaatccgaa cacccgtacc gaggtgagca ccctctgcat cagccagttt cgctacagcg
     1501 cacaaatccg cccttcttcc gtggtgacca aagactacac ctttaaacga cccggctggg
     1561 cagggcgttt tgatcaggaa ggccagtacc aggattacca gcgcacacag tatgaagtgt
     1621 atgactaccc cggacgtttc aagggtgccc acgggcagaa ctttgcccgc tggcagatgg
     1681 atggctggcg caacaacgca gaagtggcgc gcggaacaag ccgttcgccg gagatatggc
     1741 cgggacggcg aattgtgctg acggggcatc cgcaggcgaa cctgaaccgg gaatggcagg
     1801 tggtggcgag cgatcttcac ggcgaacagc cgcaggcggt accgggacgc aggggttcag
     1861 gcaccacgct ggataaccac tttgcggtaa tcccggcaga ccggacatgg cggccacagc
     1921 cgttgctgaa accgctggtg gacggcccgc agagcgccgt cgtgacggga ccggcaggcg
     1981 aggaaatctt ctgtgatgaa catggccgcg tgcgggtgaa atttaactgg gaccgctata
     2041 acccgtcaaa ccaggaaagt tcatgctgga tccgtgtggc acaggcgtgg gcaggcaccg
     2101 gctttggtaa cctggcgata ccgcgtgtgg gtcaggaggt cattgtggac ttcctcaacg
     2161 gcgatccgga ccagccgatc attatggggc gtacctacca ccaggaaaac cgcacccccg
     2221 gcagcctgcc ggggacgaag acgcagatga cgatccgctc gaaaacctat aagggcagcg
     2281 ggtttaatga actgaagttt gacgatgcga cagggaaaga acaggtctac atccacgcgc
     2341 agaagaacat gaacaccgag gtgctgaata accgcaccac tgatgtgata aacaaccatg
     2401 ccgaaaaaat aggtaacaac caggcgatca ccgttaccaa taaccagatc cagaacattg
     2461 gcgttaatca gatacagacg gttggtgtca accaggtgga aacggtgggc agtaaccaga
     2521 ttatcaaagt gggatcaaac caggttgaaa aggtggggat cattcgtgcg ctgacggtgg
     2581 gtgtggctta ccagacgacg gtaggcggca ttatgaatac ctcggtggcg ttgttgcagt
     2641 cctcacaggt agggctgcat aaatcactga tggtgggaat gggctacagc gtcaatgtgg
     2701 ggaataacgt caccttctcg gtgggcaaga caatgaagga aaacaccgga caaacagcag
     2761 tttattctgc cggtgagcat cttgaactct gctgtggtaa ggcaaggctg gtgctgacga
     2821 aggacggaag catatttctc aatggtacgc acattcatct ggaaggggag tcggatgtga
     2881 acggtgatgc gccagtgatt aactggaact gtggtgccac acaacctgta ccggatgcgc
     2941 ctgtgccgaa agatttaccc cccggaatgc cggatatgcg gcaattttga gtcaggtgca
     3001 aaaaattaaa acggaactgg tgcagtgacc agataaacca tattaaaagc agaaggaatt
     3061 gattcatggg cggaaaaccg gcggcgcggc agggtgatat gacccgcaag ggactggata
     3121 ttgtgcaggg ttcagcgggg gtgctgatag gtgcgccgac gggagtggcc tgttcggtat
     3181 gtccgggagg gattacctat gctaacccgg tgaacccgct gctgggtgcg aaggtgctgc
     3241 cgggcgagac ggaccttgcg ctgcccggcc cgctgccgtt tattctttcc cgcgcctaca
     3301 gcagctaccg gaccagaaca cccgcgccgg t
//
LOCUS       DAPGWB010000269         3318 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.272, whole genome shotgun sequence.
ACCESSION   DAPGWB010000269 DAPGWB010000000
VERSION     DAPGWB010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3318
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.272"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            175..1695
                     /locus_tag="RHX79_004554"
     CDS             175..1695
                     /locus_tag="RHX79_004554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418214.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDV2199630.1"
                     /translation="MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKE
                     ARDRVRSAIINSGYEYPAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLD
                     EYELVGELALTGALRGVPGAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHL
                     QAVCAFLEGKHALERPKPTDAVSRALQHDLSDVVGQEQGKRGLEITAAGGHNLLLIGP
                     PGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRPFRSPHHSASLT
                     AMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITY
                     PARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGI
                     LSKTVVPGESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGT
                     LIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQEAVSYRAIDRLLIHLQKLLT"
     gene            complement(1720..2058)
                     /gene="maoP"
                     /locus_tag="RHX79_004555"
     CDS             complement(1720..2058)
                     /gene="maoP"
                     /locus_tag="RHX79_004555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ori organization protein MaoP"
                     /protein_id="HDV2199631.1"
                     /translation="MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNE
                     LDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVE
                     GAEDYTDSDD"
     gene            2177..3016
                     /gene="hdfR"
                     /locus_tag="RHX79_004556"
     CDS             2177..3016
                     /gene="hdfR"
                     /locus_tag="RHX79_004556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator HdfR"
                     /protein_id="HDV2199632.1"
                     /translation="MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLG
                     VNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWEC
                     MLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQL
                     LGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQ
                     IAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNTLIRDLLKINVLD
                     EVY"
     gene            complement(3112..3187)
                     /locus_tag="RHX79_004557"
     tRNA            complement(3112..3187)
                     /locus_tag="RHX79_004557"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3152..3154),aa:Trp,seq:cca)
     gene            complement(3196..3272)
                     /locus_tag="RHX79_004558"
     tRNA            complement(3196..3272)
                     /locus_tag="RHX79_004558"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3236..3238),aa:Asp,seq:gtc)
BASE COUNT          884 a          821 c          813 g          800 t
ORIGIN      
        1 ttcccttcct cgtagttcat cctttgtccg ctgcattttt gcgagcatca ttccaccgcc
       61 agaacaactc aacttcactt gcacaaataa acaggaatca gccactaaaa ttcacgaatt
      121 agcgggctac agcagcgata tcttatgcac ataatggtga ctcaaggagg gcttatgtca
      181 ctgtcaattg ttcatacccg cgcagccctg ggagtaaatg cgcccccgat cactgttgag
      241 gtacatatca gtaaaggtct acccggctta acgatggtgg gcttaccaga aacaacggta
      301 aaagaagctc gcgatcgcgt gcgcagcgcc attatcaata gcggatatga atatccggcg
      361 aaaaaaatca ccatcaacct ggctccagcc gatctgccaa aagaaggggg acgatatgat
      421 ttacctatcg ccattgcgtt gctggcggcc tcagaacagc ttacagccaa taagttagat
      481 gaatatgaat tagtcggaga actggctctt acaggcgctc tgcgtggcgt tcccggtgca
      541 atctccagtg caactgaagc tattaagtcg ggcagaaaaa ttatcgtcgc gaaagataac
      601 gaagatgaag tggggctaat taacggtgaa ggatgcctga tagccgatca tctgcaagct
      661 gtctgtgcgt ttctggaagg taagcacgct ctcgaacgcc cgaaaccaac tgatgcagta
      721 tcccgggcgc tacaacatga tctcagtgat gttgtcggtc aggaacaagg aaagcgagga
      781 ctggaaatta ccgccgctgg cgggcacaac cttttactga ttgggccgcc gggaacaggt
      841 aaaacaatgc tcgccagccg tattaatggc ctgttgccag atttaagcaa tgaagaggca
      901 ctggagagcg ctgcgatatt aagtctggta aatgctgaat cagtacaaaa acaatggcgg
      961 cagcgcccgt tccgctcacc tcatcacagt gcgtcgttaa ctgcgatggt gggcggtggt
     1021 gcaattccag ggccaggtga aatttcgttg gcgcataacg gcgtgctttt tcttgatgag
     1081 ctacctgaat ttgaacggcg tacactggat gccttgcgag agccgattga atccgggcag
     1141 atccatcttt cacgcacacg agcaaaaata acctatccag cccgtttcca gcttgtcgcg
     1201 gcgatgaatc ccagccctac cggacattat cagggaaacc ataaccgctg cacgccagaa
     1261 cagacattac gttatctcaa ccggctctcg gggccctttc tcgaccgctt cgatctctca
     1321 ctggagatcc cattaccacc ccccggcatt ttgagtaaaa cggtagtgcc gggagaaagc
     1381 agcgccaccg ttaaacaacg cgtaatggcc gccagagagc gccaatttaa gcggcagaat
     1441 aaactgaatg cctggctgga tagtccggaa atacgccaat tctgcaaact tgagagcgaa
     1501 gatgcgatgt ggttggaagg aacactgatc catctggggt tatcgattcg tgcctggcag
     1561 cggttattga aagttgcacg aaccattgct gatattgatc agtctgacat tatcacacgt
     1621 cagcatttgc aggaggcagt tagctatcgt gcgattgacc gtttgctcat ccatctgcaa
     1681 aaactactga cataaaaaaa gggcatttcg ccctttttat taatcatcag aatcggtgta
     1741 gtcttcagca ccttcaacct gcggtttacc gccggaaagg gtgtgaaaac gttttggacg
     1801 cttaatacgc gtcatatact tggaccacac gcgttctgct tctgtcactg gctcacgttc
     1861 gccacggcat actgctacga agagtttctc ttcctcggta accggctcgc gtttgccaag
     1921 atccaactca ttgaaggcat aaccatgacg ctcaagcagt tgtgcctctt tgatggtgaa
     1981 atcaccatga cgagagaatc cacgtggata atgtttattg tcgaaatatc gattagtcgt
     2041 cgtaaagctt tccgccatcc tgcacgctcc taattctttg accgagctag ttatggcgcg
     2101 gagtattagt tacgcttgac agagtgtaaa acaaaacatt taaatcataa cgacaaataa
     2161 ttttgcggag agcactgtgg atacggaatt gttaaaaact ttcctggaag ttagccgaac
     2221 gcgtcacttt ggtcgagcgg ctgaatcgct ctatctgacc cagtcagcag tgagctttcg
     2281 aatcagacaa ctggaaaatc aactgggtgt gaaccttttc acccgccaca gaaacaatat
     2341 ccgtttaacc gctgccggtg aaaaactact gccttatgca gaaacgctca tgagcacctg
     2401 gcaggccgcc cgtaaggagg tggcgcatac ctcacgacat aacgagtttt ctatcggtgc
     2461 cagcgcctcg ttgtgggaat gtatgcttaa tcagtggctg ggacgcttgt atcaaaatca
     2521 ggatgcccat acaggcttac agttcgaagc gcgaattgcc caacggcagt ctctggtaaa
     2581 acagctgcat gaacgccagc ttgatcttct tattaccact gaagcgccca aaatggacga
     2641 atttagtagt cagttgctgg gatatttcac tttagcgctt tataccagtg ccccttcaaa
     2701 actaaaggga gatcttaatt atctgcgact tgagtggggg ccagattttc aacagcatga
     2761 ggcaggtttg atcggtgctg acgaagtgcc cattctgaca accagttctg ctgaactggc
     2821 acagcaacag attgcgatgc ttaatggttg cacctggcta cccgtcagct gggcgcgtaa
     2881 aaaaggcggc ctgcataccg ttgtcgatag cacaacactt tcacggccgc tttatgccat
     2941 atggctgcaa aatagcgata aaaatacgtt gattcgcgat cttttgaaaa ttaacgtgct
     3001 ggatgaagtg tattaatatg aatggctggc aaggatgccg gtagaaggat ttacttcgga
     3061 gagggttatt tcagataaaa aaaatcctta gctttcgcta aggatgattt ctggcagggg
     3121 cggagagact cgaactccca acacccggtt ttggagaccg gtgctctacc aattgaacta
     3181 cgcccctaat tagggtggcg gaacggacgg gactcgaacc cgcgaccccc tgcgtgacag
     3241 gcaggtattc taaccgactg aactaccgct ccaccgaatt cttttacaac caccggtttt
     3301 atgaccggct tactgctt
//
LOCUS       DAPGWB010000270         3274 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.273, whole genome shotgun sequence.
ACCESSION   DAPGWB010000270 DAPGWB010000000
VERSION     DAPGWB010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.273"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            772..2158
                     /locus_tag="RHX79_004559"
                     /pseudo
     CDS             772..2158
                     /locus_tag="RHX79_004559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708749.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
     gene            2239..2700
                     /locus_tag="RHX79_004560"
                     /pseudo
     CDS             2239..2700
                     /locus_tag="RHX79_004560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            2837..>3274
                     /locus_tag="RHX79_004561"
     CDS             2837..>3274
                     /locus_tag="RHX79_004561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001102791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytotoxin"
                     /protein_id="HDV2199633.1"
                     /translation="MNVQWQQKYLLEYNELVSNFPSPERVVSDYIRRCFKTDLPWFSQ
                     VDPDNTYFIRFSQSRSNSRSYTGWDHLGKYKTGVLTLTQAALINIGYQFDVFDDANAS
                     AGIYKTSSADMFNEKNEEKMLPSEYLYFLKGCDFSGIYGRFLSD"
BASE COUNT          969 a          666 c          821 g          818 t
ORIGIN      
        1 tcagatttca atttttcatt aacaggttaa gaggtaatta aatgccaaca ataaccacta
       61 cataaattaa aagcacactg cagtctgcaa agcaatccgc tgcaaataaa ttgcattcag
      121 caggacaaag cacgaaagat gcattaaaaa aagcagcaga gcaaacccgc aatgcgggaa
      181 acagactcat tttacttatc cctaaagatt ataaaggaca gggttcaagt cttaatgacc
      241 ttgtcaggac ggcagatgaa ctgggaattg aagtccagta tgatgaaaag aatggcacgg
      301 cgattactaa acaggtattc ggcacagcag agaaactcat tggcctcacc gaacggggag
      361 tgactatctt tgcaccacaa ttagacaaat tactgcaaaa gtatcaaaaa gcgggtaata
      421 aattaggcgg cagtgctgaa aatataggtg ataacttagg aaagacaggc agtgtactgt
      481 caacgtttca aaattttctg ggtactgcac tttcctcaat gaaaatagac gaactgataa
      541 agaaacaaaa atctggtagc aatgtcagtt cttctgaact ggcaaaagcg agtattgagc
      601 taatcaacca actcgtggac acagctgcca gccttaataa taatgttaac tcattttctc
      661 aacaactcaa taagctggga agtgtattat ccaatacaaa gcacctgaac ggtgttggta
      721 ataagttaca gaatttacct aaccttgata atattggtgc aggtcagcga aatgcaacgc
      781 aagcttgcca catgggcggt caagatccat ccagacggat ttcacaactg ctgcgtctga
      841 taacacaatc agaagggctg gctgaagcgg cgcggctcac gttttcgtca aagggagcac
      901 actctccctg tgttgagggt gtgaacacag caaagctaca ggccggacgg tctgctgagc
      961 tgcaaaggct cagcgaagaa cttatctttg gtcactacca gcctatgcca gccagatggg
     1021 gttatatccc gaaaagcaac ggcaaattgc gaccactggg tatcccagcg atgcggtatt
     1081 gttcagcggg ccatgctgat ggtgatggag ccgatatgga agagtgatgt tcatacgctc
     1141 tcgtatggct tccggtctga acgcagagtc cataacgcga tctgcacggt gaaattacag
     1201 ctcaccgact gcggggaaac acgggggcgc tggattattg aaggtgacct gtccagctac
     1261 ttcggcacat tacatcaccg gctgctgatg aaagcgctcc gccgcaggag cagtgacgca
     1321 cgctttatga gcttacagtg gaaaaccatc aaggccgtgc atgttgatgt cggtctcttc
     1381 cgggagacct gtgaaggtgt gctacagggc tgtgtgatct cgccgttgct gtcgaacatc
     1441 atgctgaatg agttcgacca gtatctgaat aagcgctatc tgagtggaaa agccagaaag
     1501 gagcgctggt acaggaatca cagtatccag cgaggccgaa gtactgctgt caaagaaaac
     1561 tggcaatgga aacctgccgt tgcttattgt cgctatgtcg atgacttcgt gcttatcgtc
     1621 aagggtacca aagcacaggc gaaagccatc agggaagaat gctggggggc tcgaagacag
     1681 cctgaagctc aggctgaaca tggacaagac cagaatcacc catgtaaacg acggctttgt
     1741 tatcaggtaa ttacagtgaa agcaaaatcg atatggttga tatattcaac cagaaactga
     1801 aaggctgggc tgcgttctat cagttcgttg attttaaggc caaagtattc agttatatcg
     1861 accgagtggt attctggaag caggctcact ggctggcccg aaaatatcgt aaaggtattg
     1921 cctacatgat gaggtggtgg tgtaaatcac cgaaatcggg tcagagtaaa acgtgagttt
     1981 tatttggcaa aaccaaccac ggcaagctca gtggcgaaat cctgtacctg ttggcgggca
     2041 aggcaagaag cggttccgct ggcgtctgcc agaaggtaac ccttacctga ggacggaaac
     2101 cagaaacaca tatatatcgc gttactctga agtggcaatg gcgttcgcca gcgtttaaac
     2161 ggagagccgg atgcgctgaa aggtgcccgt ctggttcggg gaggagaggc agggaattag
     2221 tccgactacg ttctgcctct tactctacta cgtacggata aaggctggct gtatctggca
     2281 gtgatcattg acctgtggtc acgtgtcgtt attggctggt caatgttgcc acgcatgacg
     2341 gtgcaactgg cctgcgatgc cttgcagatg gtgctgtggc ggcgtaggag gtcatggaac
     2401 gttatcgttc acacggaccg tggaggccag tattgctcat tagattatca gactttgctg
     2461 aagcggcata atctaatgag cagtatgagc gcaaagggct gctgttacga taatgcctac
     2521 gtggaaagcc tctttcattc gctgaacgtg gaatgtatcc acggagaaca ctttattagc
     2581 cgggaaacaa tgcgagcaac agtgtttaat tatatcgaat gtgattacaa tcgttggcga
     2641 cggcacagtt ggtgtggcgg tcttagttct gaacaatttg ataaccagaa cctcgcttag
     2701 ggcggtgtcc atattacgtg tgtaagatca caatgcgtat aataaatgct cccttaaaaa
     2761 ttgctttagc ttaatgatta gatatggtag caaggtgtag taaaatattg agtttgactg
     2821 aggatttagt gatattatga acgttcaatg gcaacaaaaa tatcttcttg agtacaatga
     2881 gttggtatca aatttccctt cgccagaaag agtagttagc gattacatta ggcgttgttt
     2941 caaaacagac ttaccttggt ttagtcaagt ggatcctgat aacacttatt ttatacgatt
     3001 ttctcaaagt cggagtaata gtagatctta caccggatgg gatcatcttg gaaaatataa
     3061 aacaggagta ctgacactca ctcaagccgc acttattaat attggctatc aatttgatgt
     3121 ttttgatgat gcaaatgcaa gtgcgggaat ctataaaaca agcagtgcag atatgtttaa
     3181 cgaaaaaaat gaagagaaaa tgcttccttc agaatacctt tattttttga aagggtgtga
     3241 tttttcaggt atttatggcc gatttctgtc agat
//
LOCUS       DAPGWB010000271         3244 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.274, whole genome shotgun sequence.
ACCESSION   DAPGWB010000271 DAPGWB010000000
VERSION     DAPGWB010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3244)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3244)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3244
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.274"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..486
                     /gene="traK"
                     /locus_tag="RHX79_004562"
     CDS             <1..486
                     /gene="traK"
                     /locus_tag="RHX79_004562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system secretin
                     TraK"
                     /protein_id="HDV2199634.1"
                     /translation="ATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSDLRGTG
                     EEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAVWTG
                     NHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGEG
                     N"
     gene            486..1913
                     /locus_tag="RHX79_004563"
     CDS             486..1913
                     /locus_tag="RHX79_004563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001553749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraB"
                     /protein_id="HDV2199635.1"
                     /translation="MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGET
                     VAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDD
                     QRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPP
                     QGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGS
                     FAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSS
                     ERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDG
                     IGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIP
                     IGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQ
                     MLKQLGNLNPQQFMSGSQGGGNDGK"
     gene            1903..2493
                     /locus_tag="RHX79_004564"
     CDS             1903..2493
                     /locus_tag="RHX79_004564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001528624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraP"
                     /protein_id="HDV2199636.1"
                     /translation="MANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMA
                     LFVLWKDNTTPGKLLVKEINFVRQTAPAGQFPVSECWFSSSDSSGRSEIQDICHYRAA
                     DAADYVRETDRSLMQLVTALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLK
                     EVYTEDASLPGKIRKCPVYLPDDRTNRNNGDKNEHA"
     gene            2447..2800
                     /locus_tag="RHX79_004565"
     CDS             2447..2800
                     /locus_tag="RHX79_004565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001377845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbD"
                     /protein_id="HDV2199637.1"
                     /translation="MTEQTETTEIKMNMRNINVITALSVPGKTVSDDFMHAVLSNCAT
                     RIVLPAPEKFGSESLPDNFNMAAVGVMKKGMSMSLFSSPGHIVVAGQSGGGKSVPVKE
                     LIDRIIQKYKEPFDE"
     gene            2793..3044
                     /gene="trbG"
                     /locus_tag="RHX79_004566"
     CDS             2793..3044
                     /gene="trbG"
                     /locus_tag="RHX79_004566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001038337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbG"
                     /protein_id="HDV2199638.1"
                     /translation="MNKLVSDGSVKKINYPVLYESGITPPLCEVSAPEPDAGGKRIVA
                     YVYKSSRSTVFENPDIVKTCTVRDLKKDFVNCDEKGEGQ"
     gene            3041..>3244
                     /gene="traV"
                     /locus_tag="RHX79_004567"
     CDS             3041..>3244
                     /gene="traV"
                     /locus_tag="RHX79_004567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system lipoprotein
                     TraV"
                     /protein_id="HDV2199639.1"
                     /translation="MKQISFFIPLLGTLLLSGCAGTSTEFECNATTSDTCMTMEQANE
                     KAKKLEQSSEAKPVAASLPRLAEG"
BASE COUNT          797 a          787 c          954 g          706 t
ORIGIN      
        1 gccaccgtca acaaaaagcc ctttacgttc attctggaaa cagaacgtgg tctgaatctt
       61 tccattcagg ccgttccccg tgaaggcgcg gggcgtacca ttcagctggt cagtgacctg
      121 cgcggaaccg gagaagaagc cggtgcgtgg gaaacgtcca cgccttacga atccctgctt
      181 gtgaccatca gccaggccgt ccgtggcgga aaattacccg caggctggta tcaggtccca
      241 gtgacaaagg aaaccctgca ggccccggcg gggctgtctt cagtggcaga tgccgtatgg
      301 acggggaatc acctgaagat ggtccgcttt gccgtggaaa ataaaacgct gtctgccctg
      361 aatatccggg aaagtgactt ctggcagccg ggaacccgtg ccgtgatgtt cagccagcct
      421 gccagccagt tactggcagg tgcgcgcatg gatgtgtatg tcatccgtga cggggagggc
      481 aactgatggc cagtatcaat accattgtga aacgcaagca gtacctgtgg ctggggattg
      541 tggttgtcgg tacagcctcc gcgattggtg gggcactgta tctgtctgat gtggacatgt
      601 ccggtaacgg tgaaaccgtg gctgaacagg agcctgtgcc ggatatgacc ggtgtggtgg
      661 atacgacctt tgatgacaag gtgcgtcagc atgccaccac cgagatgcag gtgacggcag
      721 cgcagatgca gaagcagtat gaggaaatcc gtcgtgagct ggatgttctg aacaaacagc
      781 gcggtgatga ccagcgtcgt attgaaaagt tgggacagga caatgccgcc ctggcagagc
      841 aggtaaaagc cctgggtgct aatcccgtca cggcgaccgg tgagcctgta ccgcagatgc
      901 ctgcctcacc gcccggcccg gaaggcgaac cacagccagg aaacaccccc gtatccttcc
      961 cgccgcaggg cagcgttgct gttccaccgc cgacggcgtt ttatcccggg aatggtgtca
     1021 cgccaccacc acaggtgacg taccagtctg tgccggtgcc taaccggata cagcgtaagg
     1081 tgtttacccg taatgaggga aaacagggac catcactgcc gtacattccg tcaggaagtt
     1141 ttgcgaaagc catgctgatt gaaggggcgg atgccaatgc ctctgtcacc ggtaatgaat
     1201 ccacggtgcc gatgcagctg cgtatcaccg gcctggtgga aatgccgaac agcaagacgt
     1261 atgacgcaac gggatgtttt gtgggtctgg aagcctgggg ggatgtgtcc agtgagcgtg
     1321 ccattgtacg cacccgcaat atcagttgcc tgaaggacgg caaaactatt gatatgccga
     1381 ttaaggggca tgtcagcttc cggggtaaaa acggtatcaa gggcgaagtg gtgatgcgta
     1441 acggcaaaat cctcggctgg gcatggggcg cgggatttgt tgacggtatc ggtcagggaa
     1501 tggagcgcgc ctcccagccg gctgtcgggc tgggtgccac agccgcttac ggggctggtg
     1561 atgtcctgaa aatgggtatc ggtggcggcg catcgaaagc cgcacagacg ctcagtgact
     1621 actacatcaa acgtgccgaa cagtatcacc cggtgatacc gattggtgcg ggcaacgaag
     1681 tgaccgtggt gttccaggac ggcttccagc tgaaaaccgt ggaagagatg gcgctggaac
     1741 gcacgcagag cagagcggaa gaagacaatc cggaaagtcc ggttcctgtt ccgccatcgg
     1801 ctgaaagtca tcttaacggc tttaatactg accagatgct gaagcagctg ggcaacctga
     1861 atccgcagca gtttatgtcc ggcagccagg gagggggcaa cgatggcaaa taatatgtcg
     1921 tcccgtcagg cgtgccatgc cgcccggtat gttgtcgccc gggttctgcg aggactgttc
     1981 tggtgtctga agtacaccgt cattctgcca ctggccacaa tggccctgat ggctctgttt
     2041 gttttatgga aggacaacac cacgccgggg aaattactgg ttaaggagat taacttcgta
     2101 agacaaacag cacctgccgg acagttcccg gtcagtgaat gctggttttc ttcctctgat
     2161 tcttcaggca gatcagaaat acaggatatc tgccattacc gcgcggctga tgctgcagat
     2221 tatgtcaggg agactgaccg gtcactgatg caactggtca ccgcattatg ggcaacactg
     2281 gcactgatgt atgtctcgct ggcagcgatc accgggaaat atccggtgcg acccggaaaa
     2341 atgaaatgta tccgggtggt aaccgcagat gaacatctga aggaagttta tacggaagac
     2401 gcttccctgc cgggaaaaat caggaaatgc cctgtttatc ttcctgatga cagaacaaac
     2461 agaaacaacg gagataaaaa tgaacatgcg taatattaat gttattacag ccctctctgt
     2521 gccgggtaaa accgtgtcag atgattttat gcatgctgtt ctcagtaact gcgccacaag
     2581 aatcgtactt cctgcaccgg agaaattcgg ttctgagtca ttgccggaca attttaatat
     2641 ggctgctgtc ggtgtgatga agaagggtat gtcgatgagt ttattttctt ctccggggca
     2701 tattgtggtt gccggacaat ccggtggcgg aaaatctgtt ccggtgaaag aactaatcga
     2761 cagaattatt cagaaatata aggagccctt cgatgaataa gctggtttct gatggcagcg
     2821 tcaaaaaaat aaattatccg gtgctgtatg agtccggaat aacacctccg ttatgtgaag
     2881 tcagtgcacc agaacctgat gcgggtggga aacgcattgt ggcatatgtt tataaatcat
     2941 cacggagtac ggtttttgaa aatcctgaca ttgtaaaaac ctgtacggtc agggatttga
     3001 agaaggattt tgtgaactgc gatgagaaag gtgagggaca atgaaacaga tttctttctt
     3061 tattcctctg ctggggacct tattactttc cggctgtgcc ggaaccagta cggaatttga
     3121 gtgtaacgcc accacatccg atacctgtat gacgatggag caggccaatg agaaggccaa
     3181 aaaactggag cagtcctcag aagcaaagcc ggttgcggca tcactgccgc gcctggctga
     3241 aggg
//
LOCUS       DAPGWB010000272         3215 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.275, whole genome shotgun sequence.
ACCESSION   DAPGWB010000272 DAPGWB010000000
VERSION     DAPGWB010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3215
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.275"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..650)
                     /locus_tag="RHX79_004568"
     CDS             complement(<1..650)
                     /locus_tag="RHX79_004568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000582547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDV2199640.1"
                     /translation="MIIDAHTHIGDFVKISMPEDVFLASLDKYDIDFALCSCGSAVEV
                     DHDQNPIPDEDQVTQHDNNERMLRLVRQHAKRIGAFMWIKPRLESCDQDFEDMIASNR
                     DIIYGIKVHPYHSKMAFNSEKVQDYIRLAQKYDLPVVSHTSNDYESSPQLVYEMAQKY
                     PDVNFVMCHMGLATDNQEAIELIAKLPNLYGDTAWVRADMVYQAIKICGCDKILFGT"
     gene            complement(672..2471)
                     /locus_tag="RHX79_004569"
     CDS             complement(672..2471)
                     /locus_tag="RHX79_004569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glycosidase"
                     /protein_id="HDV2199641.1"
                     /translation="MITVSSLKHSAKSEDSYAYDNETLHVRLRTLRGEVDKVILWIGD
                     PYNWAEGGLDGGNMAGTEAFGWIGGNEIEMEQEAVTEFHDHWFAVFKPQKRRCRYGFI
                     LFGKEGEKFLFGEKRCVDISSPECEERELSRLNNFFCFPYLNKIDVLNTPSWVKNTVW
                     YQIFPDRFCNGRPEISPEGVEPWGSTPTSFNFMGGDLWGVIDKLDYLEDLGINGIYFC
                     PIFTSASNHKYDTIDHFSVDPHLGGNIAFHTLIEEAHKRGIKIMLDAVFNHLGADSPI
                     WLDVVRNGANSRYADWFWIHKFPVYPDTPKSEWDFKNFNYETFGNVIEMPKLNTENEE
                     CREYLLSIVRYWTQNFDIDGWRLDVANEVDHHFWRDFRKVIKDIKPECYILGEIWHEG
                     TPWLRGDQFDSLMNYPLTYGIIDYFALQDTTKQEFMTSVTRSYLCYPKNITEVMFNLL
                     DSHDTARILSVCLNDKRKVKLAYLFMLTQAGSPCIYYGSEIGIDGFKSMTLENNRKCM
                     IWDENKQDLELRQFIRWLIRLRKKHPQWCEASIQWKDVEHPTVIAYQRDNITFFLNNS
                     EDTANFIYDGRSMEISGFSYEIEGLPAADLYDF"
     gene            complement(2489..>3215)
                     /locus_tag="RHX79_004570"
     CDS             complement(2489..>3215)
                     /locus_tag="RHX79_004570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001583591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDV2199642.1"
                     /translation="KKGNNLFSSTFSGIEFTFDHYITLFTDTPYMQWYLNTFILATAN
                     MLISLFVVTMTAYVFSRYRFRGKRNTLMSILVLQMFPAFLSMTAIYILLSKANLIDTY
                     TGLLLVYVTGSLPFMTWLVKGYFDAIPTSLDEAAKIDGAGHLTIFIQIILPLAKPILV
                     FVGLVSFTGPWMDFILPTLVLRSEDKMTLAIGIFSWIASNSAENYTLFAAGALLVAVP
                     ITLLFVFTQKHITTGLVSGAVKE"
BASE COUNT         1045 a          699 c          542 g          929 t
ORIGIN      
        1 gtaccgaata aaatcttatc acaaccacag atttttatcg cctggtaaac catatccgcc
       61 ctaacccacg cagtatcgcc atagagatta ggaagttttg caatcaattc gattgcttcc
      121 tgattatcag tcgcgagccc catatgacac ataacaaaat tcacgtctgg atacttttgt
      181 gccatctcat aaactaactg tgggctggat tcataatcat tagaagtatg gctaactacc
      241 gggagatcat atttttgagc aaggcgtata taatcctgaa ctttttctga gttgaaagcc
      301 atttttgaat gataagggtg aactttgatg ccataaatga tatctcgatt gctggcaatc
      361 atatcttcaa agtcttgatc acaactttcc agacgaggct taatccacat aaacgcgcca
      421 attcgctttg catgttgacg aacaagtctg agcatacgtt cattgttatc atgctgtgta
      481 acttgatctt catccggaat cgggttctgg tcatggtcaa cttcaacggc agatccacag
      541 gaacataacg caaaatcaat atcatacttg tccagagatg ccagaaaaac atcttctggc
      601 atgctgattt tcacaaaatc accaatatga gtgtgtgcat caattatcat aacaaacatc
      661 ctaattgaaa tttaaaaatc ataaagatca gcagcaggta aaccttcaat ttcataactg
      721 aaaccggaga tctccatact tcttccgtca taaataaagt tggcagtatc ttcactatta
      781 tttaagaaga aagtgatgtt atcgcgttga taagcgatca ccgtaggatg ttcaacatct
      841 ttccattgta ttgatgcctc acaccattgt ggatgttttt tacgtagacg tattaaccaa
      901 cgtataaatt gccgtaattc aagatcttgt ttgttttcat cccatatcat acattttcta
      961 ttattctcaa gcgtcattga tttaaaacca tcaattccta tttcgctacc gtagtagata
     1021 caaggagagc ccgcttgagt taacataaat aaataggcga gtttaacttt tcgtttatca
     1081 ttcaaacaaa cgcttaaaat acgcgcggtg tcatgactat ccagaagatt aaacataact
     1141 tcagttatat ttttaggata acaaagataa gaacgtgtaa cggatgtcat aaattcttgt
     1201 tttgttgtat cctgtaacgc aaaataatca ataatcccat atgttaaggg ataattcatt
     1261 aatgaatcaa actgatcacc acgcaaccag ggggtgccct catgccatat ctcacccaaa
     1321 atataacatt caggtttgat atctttaatc acctttctga aatctcgcca gaaatgatga
     1381 tccacttcat tcgcaacatc cagacgccaa ccatcaatat caaaattttg cgtccaatag
     1441 cgaactatac taagtaagta ttcacggcac tcttcattct cagtatttag cttaggcatt
     1501 tcaataacat tgccaaaggt ttcatagtta aagtttttaa aatcccattc actttttgga
     1561 gtatcgggat aaacaggaaa tttatgaatc cagaaccaat cggcgtaacg tgaattggca
     1621 ccattgcgta caacgtcaag ccatattgga gagtcagcgc ctaaatgatt gaatactgca
     1681 tccaacatga tttttattcc acgcttatgc gcttcttcaa tcaaagtatg gaaagcaata
     1741 ttcccaccta aatgtggatc aacactaaaa tgatcgatgg tgtcatattt atggttggat
     1801 gctgaggtaa aaataggaca aaaataaatc ccattaatac ccagatcttc cagataatcg
     1861 agtttatcaa taacccccca cagatcccca cccataaagt tgaatgaagt cggtgtactg
     1921 ccccacggtt ctaccccttc tggggatatt tcaggtctgc cgttacagaa acggtctgga
     1981 aaaatttggt accataccgt attttttacc caggaggggg tatttagaac gtcaatttta
     2041 ttaagataag ggaagcaaaa aaagttattt aagcggctta actctcgttc ttcgcactcc
     2101 ggtgaactga tatcaacaca ccttttctca ccaaaaagaa acttctctcc ctctttccca
     2161 aaaagtataa aaccgtaacg gcaacggcgt ttttgaggtt tgaacactgc aaaccagtga
     2221 tcatgaaatt cggtgacagc ttcttgttcc atctcgatct cgttgccgcc aatccagccg
     2281 aacgcttctg tcccggccat gttaccgccg tcaagaccac cttcagccca attatatgga
     2341 tcgcctatcc agagaataac tttatcaact tctcctctta atgtgcgtaa ccgtacatgc
     2401 aaagtttcgt tatcataggc atagctatct tcactttttg ctgagtgttt taacgaacta
     2461 actgtaatca taaatactaa tccctaaatt attccttaac ggcaccgcta acaagtccag
     2521 tagttatatg cttctgtgtg aatacaaata acaatgtgat aggtactgca actaaaagcg
     2581 ccccagcagc aaaaagcgta taattctctg ctgaattaga agcaatccaa ctaaaaattc
     2641 caatcgccag ggtcatttta tcctcactac gaagcaccaa cgttggcaaa atgaagtcca
     2701 tccatggtcc agtgaacgaa actaatccaa cgaaaacgag aatcggctta gccaatggca
     2761 atattatctg aataaaaata gtcagatgcc ctgctccatc tattttagcg gcctcatcca
     2821 aagaagttgg aatagcatca aaataacctt ttaccaacca cgtcatgaag ggcaatgaac
     2881 cggttacata aaccagaagc aacccagtat atgtatctat caaattggcc tttgatagca
     2941 ggatataaat tgcagtcatt gataaaaatg caggaaacat ttgcaataca agaatactca
     3001 ttaacgtatt acgctttcca cgaaatcgat accttgaaaa aacgtaggcg gtcatcgtca
     3061 caacgaacag tgaaattaac atgttagcgg tagcaagaat gaaagtgttc aaataccact
     3121 gcatatatgg cgtatccgtg aacaacgtta tgtagtggtc aaatgtaaac tcgatgccac
     3181 taaatgttga actaaataaa ttattccctt tttta
//
LOCUS       DAPGWB010000273         3194 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.276, whole genome shotgun sequence.
ACCESSION   DAPGWB010000273 DAPGWB010000000
VERSION     DAPGWB010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3194)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3194)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.276"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(67..828)
                     /gene="kduD"
                     /locus_tag="RHX79_004571"
     CDS             complement(67..828)
                     /gene="kduD"
                     /locus_tag="RHX79_004571"
                     /EC_number="1.1.1.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
                     KduD"
                     /protein_id="HDV2199643.1"
                     /translation="MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVE
                     PTETIEQVTALGRRFLSLTADLRKIDGIPGLLDRAVAEFGHIDILVNNAGLIRREDAL
                     EFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA
                     SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW
                     GLPSDLMGPIVFLASSASDYVNGYTIAVDGGWLAR"
     gene            complement(858..1694)
                     /gene="kduI"
                     /locus_tag="RHX79_004572"
     CDS             complement(858..1694)
                     /gene="kduI"
                     /locus_tag="RHX79_004572"
                     /EC_number="5.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-4-deoxy-D-glucuronate isomerase"
                     /protein_id="HDV2199644.1"
                     /translation="MDVRQSIHSAHAKTLDTQGLRNEFLVEEVFVADEYTMVYSHIDR
                     IIVGGIMPITKTVSVGGEVGKQLGVSHFLERRELGVINIGGAGTITVDGQCYEIGHRD
                     ALYVGKGAKEVVFASIDTATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNR
                     RTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFH
                     MMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKD
                     LR"
     gene            complement(1981..3162)
                     /locus_tag="RHX79_004573"
     CDS             complement(1981..3162)
                     /locus_tag="RHX79_004573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708633.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HDV2199645.1"
                     /translation="MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVP
                     AYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAI
                     QCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVT
                     AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMIQSNGQTLVVDTDEQ
                     PRTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR
                     AFASVGVDPALMGIAPVYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDE
                     RRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERD
                     E"
BASE COUNT          841 a          884 c          719 g          750 t
ORIGIN      
        1 ttatgatgat ctacaggtat aaaaaaccct gccatgcggc agggtcataa aagtaagaag
       61 aatgaattaa cgcgccagcc aaccgccatc cacggcaatg gtataaccat tcacataatc
      121 tgaagcgctg gaggcaagga acactatcgg ccccatcagg tcactcggca gtccccaacg
      181 accagctgga atgcggtcga gaatttccgc gctacgttgt tcatctgccc gtagttgttg
      241 agtattgttg gtcgccatgt aacccggagc tatcgcatta acattaatgt tgtgtttagc
      301 ccattcgttc gccatcaatc gcgtcacacc catcacgccg ctttttgatg cggtataaga
      361 aggcacacgg atcccgccct ggaaggagag cattgacgcg atattgataa tcttgccgcc
      421 attgccttgc gcgataaagt gtttcgccgc tgcctgagac atgaagaata cgctcttgat
      481 attcaggttc atgacatcgt cccagtcctt ttcgctgaac tcgagagcat cttcgcggcg
      541 aatcaatccg gcgttattca ccaggatatc aatatgacca aactccgcta ccgcgcgatc
      601 cagcagtcca ggaatgccat caatctttcg cagatcggcg gtcaggctta aaaaacgacg
      661 ccccagcgcc gtgacctgct cgatggtttc agtcggttca acgatgttaa tgccaacaat
      721 gtcacagccc gcttgcgcca gccccaacgc catcccctgg cccagcccag tatcacaacc
      781 agtgacgacc gcaactttac cttcgagaga aaatgcactt aaaatcataa caatacctta
      841 ttcgtttatg cccacaacta gcgcaaatct ttaacggcca catggtccat atcatcaaag
      901 acctggtttt caccgaccat gccccagata aaggtataag ctttggttcc gacgccggaa
      961 tgaatcgacc agctcgggga gatcaccgcc tgctcgttat gcatcacaat gtgacgcgtt
     1021 tcttgcggct gccccatcat gtggaaaacg caggcgtcat catccatatt gaaatagaaa
     1081 taaacttcca tccggcgctc gtgagtgtga cacggcatgg tgttccacaa gttacctgga
     1141 gccagctccg tcagccccat actcaattgg caggtttcca gcacatccgg gacaaaatat
     1201 ttgttaattg tgcgacggtt actggtgagg ttatcgccta acgtgactgg agatacttcg
     1261 tccggtgtga cttttttggt gggatacgtc gtatgcgcgg gtgcacaatt gtaataaaac
     1321 tttgccggag tggcggtatc aatactggca aagacaactt cttttgcacc tttacccaca
     1381 tacagggcgt cgcggtgacc gatttcatag cattggccat cgacagtaat cgtaccggca
     1441 ccgccaatat tgataacacc taactcgcga cgttcaagga aatggcttac gccgagttgt
     1501 ttaccaactt ccccgccaac ggaaaccgtt ttagttatcg gcataatgcc gccaacaata
     1561 attcggtcaa tgtggctgta aaccatggtg tactcatcgg cgacaaatac ctcttcaacc
     1621 aaaaattcat tgcgcagccc ttgggtatcc agcgtttttg cgtgcgcact gtggatgctc
     1681 tgtcttacgt ccacatcaac ctccgataat cagtgaagcg tgaaaataga aaacgatagt
     1741 gaaacactgt ttcgttttct ctataaaggg atgatatgcc catgggctag ggttttcaat
     1801 taaaaataaa acaatgtttc atttttaagt caaggattaa aaaaagtgca gtgtcgatca
     1861 cgaatatgtc atgagaatgg aaaaatgagg gagcccagaa aatgtatgtc gacttgccag
     1921 ccatcattat tcaacagatt aatgacggca gatatttatc ggtaaggagg aaatgcagag
     1981 ctactcgtca cgttcaatgg tcaatgccac gccctggccc ccgccgatac aaagcgttgc
     2041 cagccctttg cgggcattac gtttcaccat ttcatgaacc agagaaacca ggattcggca
     2101 accggaagcg cctatcgggt gaccgagtgc gatcgcgcca ccattgacat tgacccgacg
     2161 ctcatcccac tcaagcatct tgccaaccga aagcgcctgt gcagcaaacg cttcattagc
     2221 ctcgataaga tcgacatcag ccaactgcca gcctacacgc tccaggcaac ggcgggtcgc
     2281 atacaccggc gcaattccca tcaatgccgg atctacacca acgctggcaa atgcgcggat
     2341 gcgggccagc acgggtaaat tcaacgctcg tgctttggct tcgctcatca tcattaccgc
     2401 agctgcgcca tcgtttatgg atgatgcatt ccccgcggtc acagaaccga gactatcaaa
     2461 tgaaggattt aaacgggcta aaccttctgc actggcgtca gtgcgtggct gttcatcggt
     2521 atcaacaacc aacgtctgac cgttactttg gatcattacc gggacgatct catctttaaa
     2581 tcgtccggcg tcaatcgccg ctcgcgcttt ttgttgcgag ctaagtgcgt aagcatcctg
     2641 caactgacgg ctgatgccat attcgcgagc cagattttcg gcggtgacac caatatgata
     2701 atcattgaag gcatcccaca acccatcatg caccagactg tcaaccaact ggctattgcc
     2761 aagctgtgca ccggtgcggc tatcagtcag aacatgtggt gcgcggctca tgttttcctg
     2821 gccaccggcg atgacaatat cagcctcgcc acactgtatc gcctgagtag ccagatgcag
     2881 tgctttaagc ccagaaccgc aaacgtcatt aatagtgatt gcagaaacgc tattaggaag
     2941 accaccttta atagccgatt gccttgccgg attctgccct gcccctgcag tcaacacctg
     3001 accaagaatt acttcatcca ccgcatatgc aggaacgccg gtacgttcta ttaacgcttt
     3061 cacgaccaga ctaccaagtt ccacggcgga atgacccgct aacgcaccgc gaaagcagcc
     3121 gataggtgtc cgtaacgccc cgacaatcac aacgtctttc atcacaacct cgcaccaatt
     3181 aacagtgcaa tagt
//
LOCUS       DAPGWB010000274         3188 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.277, whole genome shotgun sequence.
ACCESSION   DAPGWB010000274 DAPGWB010000000
VERSION     DAPGWB010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3188)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3188)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3188
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.277"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            11..871
                     /locus_tag="RHX79_004574"
     CDS             11..871
                     /locus_tag="RHX79_004574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV2199646.1"
                     /translation="MKITDHKLSEGIALTFRVPEGNIKHPLIILCHGFCGIRNVLLPC
                     FANAFTEAGFATITFDYRGFGESDGERGRLVPAMQTEDIISVINWAEKQECIDNQRIG
                     LWGTSLGGGHVFSAAAQDQRVKCIVSQLAFADGEVLVTGEMNESERASFLSTLNKMAE
                     KKKNTGKEMFVGVTRVLSDDESKVFFEKIKARHPEMDIKIPFLTVMETLQYKPAESAA
                     KVQCPVLVVIAGQDSVNPPEQGRALYDAVASGTKELYEEADACHYDIYEGAFFERVVA
                     VQTQWFKQYL"
     gene            974..1531
                     /locus_tag="RHX79_004575"
     CDS             974..1531
                     /locus_tag="RHX79_004575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000139380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fertility inhibition protein FinO"
                     /protein_id="HDV2199647.1"
                     /translation="MAEQKRPVLTLKRKTEGETPVRSRKTIINVTTPPKWKVKKQKLA
                     EKAAREAELAAKKAQARQALSIYLTLPSLDEAVNTLKPWWPGLFDGNTPRLLACGIRE
                     VLLDEVSQRNIPLSHKKLRRALKAITRSESYLGAMKAGACRYDTEGYVTEHITQEEEQ
                     YAQARLEKVRRQNRIKDELRAILAE"
     gene            1686..1889
                     /locus_tag="RHX79_004576"
     CDS             1686..1889
                     /locus_tag="RHX79_004576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199648.1"
                     /translation="MAVSSGLSEHSSIYRYQREGRHAVRQEIRGFFREAAEVWQNAAR
                     LAPCEAWRDFALKRASACRCKCR"
     gene            2632..3093
                     /locus_tag="RHX79_004577"
     CDS             2632..3093
                     /locus_tag="RHX79_004577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDV2199649.1"
                     /translation="MKKYIPVVLFVFSCQVFSADIHGRVVRVLDGDTIDVMLSQHPVR
                     VRLVNIDAPEKKQEYGRWSEKIMKSLVAGKTVTVTYFQRDHYGRILGQVYAPDGMNVN
                     QFMVRAGDAWVYEQYNTDPVLPVLQGEVRQQKRGLWADSAPVPPWVWRSRK"
BASE COUNT          900 a          638 c          845 g          805 t
ORIGIN      
        1 caggatattt atgaaaatta cggatcacaa actctctgaa ggtattgccc tgacatttcg
       61 tgttcctgaa ggaaatataa aacatccttt gattatctta tgccatgggt tttgcggtat
      121 caggaatgtt ctgctccctt gctttgcgaa tgccttcaca gaagcaggat tcgcaacgat
      181 tacttttgat tatcgaggat tcggtgagag tgatggagaa cgaggtcgtc tggttcctgc
      241 aatgcagacc gaagatatta tttcagttat caattgggca gaaaagcagg aatgtattga
      301 taatcagcgt attgggttat ggggaacatc gctgggaggg gggcatgtct tcagtgcagc
      361 tgcgcaggac caacgcgtaa aatgtattgt cagccagctg gcttttgctg acggtgaggt
      421 tctggttacc ggagagatga atgaatcgga gagagcgtct tttctatcca cgctgaataa
      481 aatggcagag aagaagaaaa acaccgggaa agagatgttt gtgggggtta cacgggtact
      541 aagtgatgat gaatcgaagg tattcttcga gaaaatcaaa gcccggcatc ccgaaatgga
      601 tataaaaata cctttcctta cggtcatgga aacgttgcaa tataaaccgg cagagagcgc
      661 agccaaagta cagtgcccag ttttggttgt tattgccggc caggatagcg ttaatccacc
      721 ggaacaggga agagcattat atgatgctgt tgcttctggt actaaggaat tatacgagga
      781 agctgatgca tgccattatg atatttatga gggcgcgttt tttgaacgtg tagtagctgt
      841 gcagacacaa tggtttaaac aatatcttta attgtcagta tttatacgtt aaaggtcgtt
      901 gaaattaact tcctgttacg atgagttgtt tcaacggcct gcagggcata ttttcacgaa
      961 ggtcagagta agcatggcag agcaaaaacg accggtactg acactgaagc ggaaaacgga
     1021 aggagagacg cctgtccgca gccggaaaac catcatcaat gtcaccacgc caccaaaatg
     1081 gaaggtgaaa aagcagaaac tggcggagaa ggctgcccgg gaagcagagc tggcggcgaa
     1141 gaaagcacag gccagacagg cgctgtccat ttatctgacg ctgccctcgc tggatgaggc
     1201 ggtgaacact ctgaaaccct ggtggccggg attgtttgac ggtaacacgc cccggcttct
     1261 tgcctgtggt atccgggaag ttttactgga tgaggtgtct cagcggaata tcccgctctc
     1321 tcataaaaaa ctgcgcaggg cactgaaggc catcacccgt tcagaaagct atcttggcgc
     1381 catgaaagcc ggtgcctgcc gctatgatac agaaggctat gtgacagaac atatcacaca
     1441 ggaagaagaa cagtatgcgc aggcgcgcct ggaaaaggtg cgcagacaga accggatcaa
     1501 ggatgagctg cgggcgatcc tggcagaata agaaaagcgc cctctgtatg acagagggca
     1561 acagcgaaaa aaatcgggaa aacagacatc cagagttttg atggagaaaa acatccaacc
     1621 gttcagggat gtttcataat gtttctgaca taatccgggt gtcgggtcaa gaggagggat
     1681 aaaaaatggc tgtatccagt ggattatctg aacacagcag tatttatcgc tatcagcgcg
     1741 aggggcgtca tgccgtccgt caggagattc gtggcttttt cagggaagcg gcagaggtct
     1801 ggcagaatgc ggcccggctg gcaccctgtg aagcatggcg ggattttgct ctgaagaggg
     1861 catctgcatg tcggtgtaag tgccgataaa aataaccccc gtcgcggagc tccgggggat
     1921 cagacttata tggcagatcg ttattattat tatagtggtg taagaaggag ttgccctgtc
     1981 tttcaaacgg acatcacaga attaacatat ttcacatccc gggtaagcca gcagggataa
     2041 aaaatgtgat gaatttcaag aagcaggagg tgacagtggc atgcataaca gtagggttat
     2101 ccggtgaatc tgacagacag ccgggctgta ttcgcggcag gataaagaaa aaccgggaga
     2161 tgactctccc ggtccgtctt atcgctaatc ccctgagcag ggcatgtatg acttatctat
     2221 gaccgttata ttcagcgcca catccggtag cctgcgatat aacacagtta tcctgtcagc
     2281 aagagcaggt atgatgaata cacggagatt aaaaatataa tctccgtcac atgttaccca
     2341 cggaaaccgg taacgccttc acgggaaata tgtgacagaa aaagcagcct ccgttactcc
     2401 aggtatcagg aggctgaata atgcatgaga cgttgtttct tatgtgtctg gtcaggctgg
     2461 ctgaccagcg tttttagtaa cacatagcca tatgtgtatt aagtcacctc atcttatttt
     2521 gttgaattga tcacaactca acggtttatt ttttgcgtga tacgtgagcc attattcatc
     2581 ccggcatgga attcatgcaa tcacgaaaag taatcagtga cggagagtaa aatgaagaaa
     2641 tatataccag tggtattatt tgttttttca tgtcaggtat tttctgctga tattcatgga
     2701 cgggtcgtgc gtgttctgga tggcgatacc attgacgtca tgttatctca gcatccggtg
     2761 cgtgtccgtc ttgttaatat tgatgcacct gaaaagaaac aggaatatgg acggtggtct
     2821 gaaaaaataa tgaaatctct ggttgcggga aaaacggtta ctgtcacata ttttcagcga
     2881 gatcattatg gtcgtattct cgggcaggtt tatgcaccag acggaatgaa tgttaatcag
     2941 tttatggtcc gtgcaggcga tgcatgggtt tatgagcagt acaacaccga tcctgttctt
     3001 cctgtcctgc agggagaagt acgacagcag aaacgtggtc tgtgggcaga cagcgctcct
     3061 gttccgccct gggtatggcg ctcacggaaa taatgatatt tctgtggcta ttgagttctc
     3121 attgaaatgc gatatttaaa agcatgaagc atattacatt attaacttat ttctctgtta
     3181 atgaaagg
//
LOCUS       DAPGWB010000275         3178 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.278, whole genome shotgun sequence.
ACCESSION   DAPGWB010000275 DAPGWB010000000
VERSION     DAPGWB010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3178)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3178)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3178
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.278"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..519)
                     /locus_tag="RHX79_004578"
     CDS             complement(<1..519)
                     /locus_tag="RHX79_004578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HDV2199650.1"
                     /translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVEGPVDGLKS
                     VLLNSTPVLDSEGNTNISGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITR
                     TITSANIDRLRFTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
                     SQYLASVVVGNLP"
     gene            complement(579..1211)
                     /locus_tag="RHX79_004579"
     CDS             complement(579..1211)
                     /locus_tag="RHX79_004579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000090899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDV2199651.1"
                     /translation="MARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSD
                     GWYQVRIAGQDVSTSGLTAQLHETLPDGAVIHIVPRVAGAKSGGVFQIVLGAAAIAGS
                     FFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQMLAPKARTPRTQTTDNGKQN
                     TYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
     gene            complement(1148..1891)
                     /locus_tag="RHX79_004580"
     CDS             complement(1148..1891)
                     /locus_tag="RHX79_004580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2199652.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVVRAPEGERYFPGVNISGEPE
                     DYFRMAPEDWLQAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHK
                     FRCVPHLIGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHREDDWWRHGQNLYLDNLEAT
                     GLYQVPLSAAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHRAWHASAFTGICNDLAAASTFV"
     gene            complement(1897..2595)
                     /locus_tag="RHX79_004581"
     CDS             complement(1897..2595)
                     /locus_tag="RHX79_004581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDV2199653.1"
                     /translation="MQDIRQETLNECTRAEQSASVVLWEIDLTEVGGERYFFCNEQNE
                     KGEPVTWQGRQYQPYPIQGSGFELNGKGTSTRPTLTVSNLYGMVTGMAEDLQSLVGGT
                     VVRRKVYARFLDAVNFVNGNSGADPEQEVISRWRIEQCSELSAVSASFVLSTPTETDG
                     AVFPGRIMLANTCTWTYRGDECGYHGPAVADEYDQPTSDITKDKCSKCLSGCKFRNNV
                     GNFGGFLSINKLSQ"
     gene            complement(2595..2924)
                     /locus_tag="RHX79_004582"
     CDS             complement(2595..2924)
                     /locus_tag="RHX79_004582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2199654.1"
                     /translation="MKTFRWKVKPGMDVASAPSVRKVRFGDGYSQRAPAGLNADQKTY
                     SVTLSVPRWEATALESFLAEHGGWKSFLWTPPYEWRQIKVTCAKWSSRVSMLRVEFSA
                     EFEQVVN"
     gene            complement(2921..>3178)
                     /locus_tag="RHX79_004583"
     CDS             complement(2921..>3178)
                     /locus_tag="RHX79_004583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDV2199655.1"
                     /translation="GNLYRLMRGYATGGYVGTPGSMADSRSQASGTFEQNNHVVINND
                     GTNGQIGPQALKAVYDVARKAAMDVVTGQMRDGGLFSGGGR"
BASE COUNT          674 a         1050 c          788 g          666 t
ORIGIN      
        1 cggcaggtta cccaccacca ccgaggccag atactgcgag gtggttttgc ccttaatggt
       61 gatgtctttt tccgtcaccc agccaccatt acgctggatc tgaaccagca ggcggacttc
      121 cgacggattc ctgtctccct ttgaggtggt ttccaccagt gcctgcacgc cgaaggtaaa
      181 acgcagtcgg tcaatgtttg ccgacgtgat ggtccgggtg atcggcgtgt cgtatttcac
      241 ttccgtaccc agcaccgtct cggagccgga ggattcaaat ccctccggcg gtgtctgctc
      301 ctgctcaccg gcccggaaca ccaccgtgac gccggagata ttggtattcc cctcactgtc
      361 cagcaccggc gtactgttca gcagcacgct ttttaatcca tccaccggac cttcaaccgg
      421 cccttcgctg atggcatcga tcacactcag cagctgcgtg gacttcaggt tgtccttcgc
      481 ttcgcgcgga gtatgcccct tactgctgcc tttacccatt cctcacgctc cataaacgac
      541 aaaaccgccc gcaggcggtt tcacataaac gtttttcatc agcgaccaat caccacaacc
      601 tgaccaccat ccccttcgtc tgccgtgctg atctcctgag agaccacccg cgaccccacg
      661 cgcatttcac cgtacagaac aggcagaaca ttgccctggg caaccatgtt atccagtgag
      721 gagaaatagg tgttctgctt accgttatcc gttgtctgtg tacggggagt tctggctttc
      781 ggtgccagca tctgcgccac accaccgagc accatactgg caccgagaga aaacaggatg
      841 ccggtcatac caccggcccc aatggctgcc ccccatgctg caagggtggc tccggcggta
      901 aagaatgatc cggcaatggc ggctgctccc aggacaatct ggaatacgcc acctgacttg
      961 gccccggcga ctctgggaac aatatgaatc acagcgccat caggcagagt ctcatgtaac
     1021 tgcgccgtta atccggacgt gctgacatcc tgcccggcaa tccgtacctg ataccagccg
     1081 tcgctcagtt tctgacgaaa cgccgggagc tgtgtggcca gtgcgcggat ggcttcagcc
     1141 cccgttttca cacgaaggtc gatgcggcgg ccaaatcgtt gcaaatcccc gtaaaggcag
     1201 atgcgtgcca tgcccggtga cgccagaggg agtgtgtgcg tcgctgccat ttgtcggtat
     1261 acctctctcg tttgctcagt tgttcaggaa tatggtgcag cagctcaccg tcaccacagt
     1321 aaatggcggc atgattcggc accgatgaac caaaacagca cagcagcaca tcgcccggct
     1381 gcgccgctga caacggcacc tgatacagcc ctgtggcctc cagattatcc agatagagat
     1441 tctgaccgtg acgccaccag tcatcctcgc gatgaaaatc cggcatctca atccccgcca
     1501 gatgataagc atcccggaac agcgtgtaac agtccgtcac cccgtgctca aagcgccgcc
     1561 cgatgagatg cggcacacag cggaacttat gaatcgcccc ccggcagacc agccaccacg
     1621 gcaaatcact ctgcacctgc agccgccggt cagcctcact cagccagggc agaccaccgg
     1681 ggtggctgtg gaccagcgcc acaatctcac cctgcatttc tgcctgcagc cagtcctccg
     1741 gagccatccg gaaataatcc tccggctcac cggaaatatt cacgccggga aaatatcttt
     1801 ccccctccgg cgctctcacc acgaagccgc acgactccgc tggcgcacat cgccgggcgt
     1861 gcgccagaat cgctgattct gtctgtgtca tgggatttac tgcgaaagtt tgttaatgga
     1921 aaggaagccg ccaaagttgc cgacgttatt gcggaactta caaccgctca ggcatttgct
     1981 gcatttatcc ttcgtgatat cggacgttgg ctggtcatat tcatccgcga ctgccggacc
     2041 gtgataaccg cactcatcac cgcgataggt ccaggtgcag gtgttggcca gcatgatacg
     2101 tcccggaaaa acagcaccgt ccgtttccgt cggcgtggac agtacaaaag aggcactcac
     2161 cgcgctcagt tcgctgcact gctcaatgcg ccagcggctg atcacctcct gctccggatc
     2221 ggcgccactg tttccgttga cgaagttcac cgcatccaga aaacgggcgt aaaccttacg
     2281 ccggaccacc gttccaccga ccagactctg cagatcttcc gccatcccgg tgaccatacc
     2341 gtacaggtta gaaaccgtca gtgtggggcg cgtactggtg cctttgccat tcagttcaaa
     2401 accactcccc tgaatgggat acggctgata ctgtcgcccc tgccaggtga ccggctcacc
     2461 tttttcgttc tgctcattac agaaaaaata acgttctcca ccgacctctg tcagatcgat
     2521 ttcccagagc accacgctgg ccgactgctc cgcacgggtg cattcattca gtgtttcctg
     2581 ccggatatcc tgcatcagtt caccacctgt tcaaactctg cgctgaactc aacacgcagc
     2641 atactgaccc gcgacgacca ttttgcgcag gtcaccttta tctgccgcca ctcataaggc
     2701 ggcgtccaca gaaaggattt ccagcccccg tgctcagcca gaaacgactc aagcgccgtg
     2761 gcctcccaac ggggaacaga aagcgtcacg ctgtacgttt tctggtcggc attcagcccg
     2821 gcaggcgctc gctgggaata gccatcacca aagcgcacct ttcttacgga aggggccgaa
     2881 gccacatcca taccgggttt cactttccag cggaaggttt tcatcgtcca cctccggaga
     2941 acaggccacc atcgcgcatc tgcccggtca caacatccat tgccgcctta cgggctacgt
     3001 cataaaccgc cttcagtgcc tgtggcccta tctgaccgtt cgtgccgtcg ttgttaatca
     3061 ccacatggtt attctgctca aacgtcccgg acgcctgcga ccggctgtcc gccatgctgc
     3121 ccggtgtacc gacataaccg ccggtggcat agccgcgcat cagccggtaa agatttcc
//
LOCUS       DAPGWB010000276         3165 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.279, whole genome shotgun sequence.
ACCESSION   DAPGWB010000276 DAPGWB010000000
VERSION     DAPGWB010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3165
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.279"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            116..2245
                     /locus_tag="RHX79_004584"
     CDS             116..2245
                     /locus_tag="RHX79_004584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001384588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HDV2199656.1"
                     /translation="MRIMSNAKGFPSIASGESSLTGFISQVDGTPAYTGVFQGWATRS
                     LYTYRWNPTIGPQWTRHARKNEVDRLDQWSSETWLYNHDKSMRLGLTGSTWGCYSDTQ
                     KKWIPLDVSHGGTGAATIDGARTNLGLGRSNSPQLNSLFLDRYSDSTNTYTSSGILHT
                     RLLATDSTVRLGADMYVETLSNEPGQLTIRFTYDGSTGASKYLNLNSEGNLIVDSAIL
                     KSTVEKPLQIRSANPAIRFNETDRPANTPTYTLIANAGDWFIQKRDYDDAGSVSNAIA
                     YNFANDRIDVQNLKASGLITANSGIATLTGHDWNSQHTDNVDKFRPIAGSTNGPAGSM
                     VLGGIHVQFSKNYAVQFGGRNSGFWGRTVENGTTQEWKKLLTVDDLNSSTDLAVRSLT
                     TSNPLKSGGGRIDVLGSTSDYSKMDCFVRGFDSTGNSLAWALGSSVGVSKMLSLKNFF
                     SGAEILLNGNDGAVQLKTGAVNGATAQALTINRNEVNSTVDLTLTKQSGTGNRFVLQN
                     SGNAELPFSVRVWGSSTRQNVFEVGTSAAYLFYAQKTSAGQLFDVNGAINCTTLNQSS
                     DRDLKDDILVISDATKAIRKMNGYTYTLRENGMPYAGVIAQEVMEAIPEAVGSFTHYG
                     EELQGPTVDGNELREETRYLNVDYAAVTGLLVQVARETDDRVTALEEENTTLRQNLAT
                     AGTRISTLENQVSELVALVGQLTGSEH"
     gene            2297..2419
                     /locus_tag="RHX79_004585"
                     /pseudo
     CDS             2297..2419
                     /locus_tag="RHX79_004585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415891.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
     gene            complement(2517..3107)
                     /locus_tag="RHX79_004586"
     CDS             complement(2517..3107)
                     /locus_tag="RHX79_004586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDV2199657.1"
                     /translation="MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGS
                     AATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGG
                     IDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVV
                     FERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI"
BASE COUNT          899 a          663 c          748 g          855 t
ORIGIN      
        1 cgcacttaat tatcgcaacc aggcgcaatt aattgttggc gataatatcg gtcttggctc
       61 agcaccgcgt gattgtcctg atatttccgg caacccatca gggtatatcg gatttatgcg
      121 cattatgagt aatgcaaaag gctttccatc gattgcatcc ggtgaaagca gtcttacggg
      181 gtttattagt caggtagatg gaacaccagc gtatacaggt gtatttcagg gatgggctac
      241 gcgctcgctt tatacttatc gctggaatcc gacaataggc ccgcaatgga cacgccacgc
      301 tcgcaaaaat gaagtggacc gtcttgacca atggagtagc gaaacatggt tatataacca
      361 tgataaatcc atgcgcctgg gtttaaccgg atcaacatgg gggtgttaca gcgacacaca
      421 aaaaaaatgg ataccgcttg atgtttctca tggtggtact ggtgcggcaa ctattgatgg
      481 tgccagaacg aatcttggat taggcaggag taatagccct caacttaaca gtctatttct
      541 tgatagatat agtgattcga ccaatacata cacatctagt ggtattctcc atacaagact
      601 gttagcaact gacagcactg tgcgtcttgg tgctgatatg tatgttgaga ctttatcaaa
      661 tgagccaggt caattaacaa taaggtttac atacgatggt tcaactggtg cttcaaaata
      721 tctaaacctt aactcagaag gtaatttaat tgtagatagt gcgatactga aatcaacggt
      781 tgaaaaacct ttacaaataa ggagcgctaa cccagcaata agatttaatg aaacagatcg
      841 cccggctaac acgcctactt atactctcat tgctaatgct ggcgactggt ttattcagaa
      901 acgcgattat gatgatgccg gaagcgttag taacgcaatt gcatataatt tcgcaaacga
      961 cagaattgat gtgcaaaatc ttaaagcgtc tgggttaatt acagctaact caggaatcgc
     1021 aacattaaca ggtcatgact ggaactctca gcatactgat aacgtcgaca aatttagacc
     1081 aatcgcaggc agtacaaacg gcccggcagg ttctatggtt cttggcggca ttcatgttca
     1141 atttagtaaa aattatgctg tgcagttcgg aggccgcaat tccggttttt ggggaagaac
     1201 agttgaaaac ggaacgacgc aggaatggaa gaaattacta acagtagacg atctaaattc
     1261 atccaccgat cttgctgtca ggtcattaac cacatctaac ccgttaaaat ctggcggagg
     1321 gcggattgat gtccttggaa gcacgtcaga ctatagcaaa atggattgct ttgtacgtgg
     1381 gtttgatagc accggtaatt ctctcgcgtg ggcgttgggt tcatcagtcg gcgtaagtaa
     1441 gatgctgtcg ctaaaaaatt tctttagcgg agctgagata ctgttaaatg gtaatgacgg
     1501 cgcggttcaa ctcaaaacag gtgctgttaa cggggctaca gcgcaggcgc tcactatcaa
     1561 caggaatgag gttaactcaa ctgttgattt aacccttaca aaacaatcag ggactggcaa
     1621 tcgttttgtt ttacagaact caggtaatgc agaactaccg ttttctgtca gggtgtgggg
     1681 ttccagtact cgacaaaacg tttttgaggt tggaacgtct gctgcgtatc tgttttatgc
     1741 gcaaaaaacg tcagcaggcc agttgtttga tgtaaatggc gctattaatt gcacaacgct
     1801 gaatcagtca tcagaccgcg accttaaaga cgatattctc gttatcagcg acgcgacgaa
     1861 agcaatccgt aaaatgaacg gatacaccta cacgctcagg gaaaacggga tgccttatgc
     1921 tggcgttatt gcacaggaag taatggaggc gataccagaa gctgtgggat cgtttactca
     1981 ttacggtgaa gagttgcagg gaccaacggt tgacggcaat gaattacgtg aagaaacacg
     2041 ttatctgaat gttgactacg ccgccgtgac gggcttactt gttcaggtcg cccgtgaaac
     2101 agatgatcgc gttaccgcgc tggaagagga aaacacaacg ctacgtcaaa atctggcaac
     2161 agcaggcacc cggatcagca ctctggaaaa tcaggtaagc gaactggttg cacttgtcgg
     2221 gcagttaaca ggaagcgaac attgatatcc ttcaagccct gaaggaggct gttcctggta
     2281 cgttcagact gttgttgagc tggaaatcgc aacggaggaa gaaacttcgt tgctagaagt
     2341 ctggaaaaag tatcgggtgt tgctgaaccg tgttaataca tcagtagtac cggatattga
     2401 atggccagca ctgccgtagg gtaaaacata taaattctat aattagatgt atctttccat
     2461 ttacggcaag gaagggggct tggaagacgt aaagcatctc acaccgagat tattttttat
     2521 atgtcaggtg tctgaagttt tgctttggct cttaaaatgg tttgccgcga ggttttgaat
     2581 tcccgggcaa tggcacttat acttacacct gacttaattc gttcgaatac cacctgtttc
     2641 tgttcttcat ttaacacagg tggtcgacca aaacgtttcc ctgcgccgcg ggctcttact
     2701 atcccggaat gagtgcgttc aagtaaaagg tctcgttcaa attcagcgac tgctgaaatt
     2761 acttgcatca tcatttttcc tgttggactg gtcaggtcaa tgccacccaa tgctaagcaa
     2821 tgcactctga tacctgtttc ggtcagttgt tccactgttt tcctgatatc cattgcatta
     2881 caaccaaggc gatccagttt tgtcacaatc aattgatcac cacatttcag gcgagcaagc
     2941 aaccggttaa aaccaggacg ctcactggtt gctgctgagc cgctaatgtg ttcttcgatt
     3001 atttgctgag gtttgatttt aaaacctgca ctttcgattt cccggcgttg attttcggtg
     3061 gtctgatcca gcgttgatat ccgacagtaa gcaaaaattc gagacatagt gagactctat
     3121 acgaaattgg tgttcatatc ataatgcatc tcagaaaata attat
//
LOCUS       DAPGWB010000277         3164 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.280, whole genome shotgun sequence.
ACCESSION   DAPGWB010000277 DAPGWB010000000
VERSION     DAPGWB010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.280"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            101..1783
                     /locus_tag="RHX79_004587"
     CDS             101..1783
                     /locus_tag="RHX79_004587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416015.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HDV2199658.1"
                     /translation="MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAF
                     SDFTPTEYSTKGKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAI
                     EAAQKSTPTLLSLMDEGVRFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGI
                     PLTETFLPELFQNHGYYTAAVGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQ
                     NRGFDYFMGFHAAGTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPF
                     MLYLAYNAPHLPNDNPAPDQYQKQFNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQ
                     YDNTIILFTSDNGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKL
                     ISAMDFYPTALDAADISIPKDLKLDGVSLLPWLQDKKQGEPHKNLTWITSYSHWFDEE
                     NIPFWDNYHKFVRHQSDDYPHNPNTEDLSQFSYTVRNNDYSLVYTVENNQLGLYKLTD
                     LQQKDNLAAANPQVVKEMQGVVREFIDSSQPPLSEVNQEKFNNIKKALSEAK"
     gene            1835..2992
                     /locus_tag="RHX79_004588"
     CDS             1835..2992
                     /locus_tag="RHX79_004588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HDV2199659.1"
                     /translation="MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIK
                     QYIAASGNQVYFTWQGGEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEW
                     CAFLKEHEFLVGISIDGPQELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTVI
                     NNVNVHYPLEVYHFLKSIGSKHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPAAY
                     GKFMSTIFMQWVKNDVGEIFIRQFESFVSRFIGNGHTSCIFQESCKDNLVVESNGDIY
                     ECDHFVYPQYKIGNINKSELKTMNSVQLTAQKKRISAKCLKCAYKPICNGGCPKHRIT
                     KVNNETVSYFCEGYKILFSTMVPYMNAMVELAKNRVPLYHIMDVAKQMENN"
     gene            complement(2958..3080)
                     /locus_tag="RHX79_004589"
     CDS             complement(2958..3080)
                     /locus_tag="RHX79_004589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199660.1"
                     /translation="MTKHPTGIYVGCLVKVIRRRLRMELKESVINYSPFVLQHP"
BASE COUNT          966 a          682 c          632 g          884 t
ORIGIN      
        1 taaatctgct atctctttat gtgactaact tcacttacat ccacttattt ctcttcgtaa
       61 aattacttcg gaattaagta caataagaag aggaacattt atgaagtctg cattaaagaa
      121 aagtgtcgta agtacctcga tatctttgat actggcatct ggtatggctg catttgctgc
      181 tcatgcggca gatgatgtaa agctgaaagc aaccaaaaca aacgttgctt tctcagactt
      241 tacgccgact gaatacagta ccaaaggaaa gccaaatatt atcgtactaa ccatggatga
      301 tcttggttat ggacaacttc cttttgataa gggatctttt gacccaaaaa caatggaaaa
      361 tcgtgaagtt gtcgatacct acaaaatagg gatagataaa gccattgaag ctgcacaaaa
      421 atcaacgccg acgctccttt cattaatgga tgaaggcgta cggtttacta acggctatgt
      481 ggcacacggt gtttccggcc cctcccgtgc cgcaataatg accggtcgag ctcccgcccg
      541 ctttggtgtc tattccaata ccgatgctca ggatggtatt ccgctaacag aaactttctt
      601 gcctgaatta ttccagaatc atggttatta cactgcagca gtaggtaaat ggcacttgtc
      661 aaaaatcagt aatgtgccgg taccggaaga taaacaaacg cgtgactatc atgacaactt
      721 caccacattt tctgcggaag aatggcaacc tcaaaaccgt ggctttgatt actttatggg
      781 attccacgct gcaggaacgg catattacaa ctccccttca ctgttcaaaa atcgtgaacg
      841 tgtccccgca aaaggttata tcagcgatca gttaaccgat gaggcaattg gcgttgttga
      901 tcgtgccaaa acacttgacc agccttttat gctttacctg gcttataatg ctccgcacct
      961 gccaaatgat aatcctgcac cggatcaata tcagaagcaa tttaataccg gtagtcaaac
     1021 agcagataac tactacgctt ccgtttattc tgttgatcag ggtgtaaaac gcattctcga
     1081 acaactgaag aaaaacggac agtatgacaa tacaattatt ctctttacct ccgataatgg
     1141 tgcggttatc gatggtcctc tgccgctgaa cggggcgcaa aaaggctata agagtcagac
     1201 ctatcctggc ggtactcaca ccccaatgtt tatgtggtgg aaaggaaaac ttcaacccgg
     1261 taattatgac aagctgattt ccgcaatgga tttctacccg acagctcttg atgcagccga
     1321 tatcagcatt ccaaaagacc ttaagctgga tggcgtttcc ttgctgccct ggttgcaaga
     1381 taagaaacaa ggcgagccac ataaaaatct gacctggata acctcttatt ctcactggtt
     1441 tgacgaggaa aatattccat tctgggataa ttaccacaaa tttgttcgcc atcagtcaga
     1501 cgattacccg cataacccca acactgagga cttaagccaa ttctcttata cggtgagaaa
     1561 taacgattat tcgcttgtct atacagtaga aaacaatcag ttaggtctct acaaactgac
     1621 ggatctacag caaaaagata accttgccgc cgccaatccg caggtcgtta aagagatgca
     1681 aggcgtggta agagagttta tcgacagcag ccagccaccg cttagcgaag taaatcagga
     1741 gaagtttaac aatatcaaga aagcactaag cgaagcgaaa taactaaacc ttcatgcggc
     1801 ggaattttcc gccgccttat tgagcgagat agcgatgcac gttacagcca agccctccag
     1861 ttttcaatgt aatctcaaat gtgattactg tttttacctt gaaaaagagt cgcagtttac
     1921 tcatgaaaaa tggatggatg acagtactct gaaagagttc atcaaacaat atatcgcagc
     1981 gtctggcaat caggtctatt ttacctggca aggcggtgaa cccactctgg ctggcctgga
     2041 ttttttccgt aaagttattc actatcaaca acgctatgca ggccaaaaac gtatttttaa
     2101 tgcattacaa acgaatggca ttttattgaa taatgaatgg tgtgcctttc tcaaagaaca
     2161 tgaatttctg gttggtatct cgatcgatgg cccccaggag ttacatgacc gttacagacg
     2221 cagtaattca ggtaacggta cttttgcaaa agtgatagca gccatcgagc gtctgaaatc
     2281 atatcaagta gagtttaata cgttaaccgt cattaataac gttaatgtcc attaccctct
     2341 tgaggtttat cattttttaa aatctatcgg cagtaaacat atgcaattta tcgaattgct
     2401 agaaaccggg acgccgaata ttgatttcag tggtcatagt gagaacacat tccgtatcat
     2461 tgatttttct gtgcctcccg cggcttatgg caagtttatg tcaaccattt ttatgcaatg
     2521 ggttaaaaac gatgtgggtg aaattttcat ccgtcagttt gaaagctttg tcagccgttt
     2581 tatagggaat gggcatacca gttgtatttt ccaggagtcc tgcaaggata atctggttgt
     2641 tgaaagtaat ggagatattt atgaatgcga ccattttgtc tatccacagt acaaaattgg
     2701 aaacattaat aaatctgaac tcaaaacgat gaacagtgta caactgacag cgcaaaaaaa
     2761 acggatttca gcgaaatgtc tgaaatgtgc atataaacct atctgcaatg gcggttgtcc
     2821 taagcatcgt attactaaag taaacaatga gactgtttct tatttttgcg aaggttataa
     2881 aatccttttt tcaaccatgg taccttatat gaacgccatg gtggagttag ctaagaacag
     2941 agtaccgctt taccacatta tggatgttgc aaaacaaatg gagaataatt aataacgctc
     3001 tcttttaact ccattcttag cctccttctt atgaccttaa caaggcaccc gacataaatt
     3061 cctgtcgggt gtttcgtcat catcatcttc ccttgcgaaa atcctggctt acgtggtatg
     3121 catcagggca ttagcaatat ccttgattat caatagcata acca
//
LOCUS       DAPGWB010000278         3071 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.281, whole genome shotgun sequence.
ACCESSION   DAPGWB010000278 DAPGWB010000000
VERSION     DAPGWB010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.281"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            584..814
                     /locus_tag="RHX79_004590"
     CDS             584..814
                     /locus_tag="RHX79_004590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199661.1"
                     /translation="MTISIVSPSAAAVKPRRHPRFRREDIPAPEIDPVLKAFGRHIAR
                     SFHRGRGVHIPAMKNTAFGQVLRTLELKRAFN"
     gene            866..2227
                     /locus_tag="RHX79_004591"
     CDS             866..2227
                     /locus_tag="RHX79_004591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3560 domain-containing protein"
                     /protein_id="HDV2199662.1"
                     /translation="MTLAAITMTAPEAASPVQMYRATYSPDDNKLRLYAASRLDPETY
                     KKVHDAGFRWAPKQALFVAPAWTPGREDVLLSLAGEIEDEDSTLAERQEARAERFTGY
                     SGKRASESAQALDEVERLAAMIPPGQPILVGHHSERRARRDAQRIENGMKRAVMLFER
                     AEYWEERARSALLHAKYKERPDVRWRRIKKIEADLRKAEKTIAQSQKYLTMWRAESLD
                     LNMAKLISSHDHISACFPLDTYPRPAEKSQYEGSRSLWSALDDDIITTEQAREIAIRC
                     HERQIQHQQRWVNHYQNRLIYERAMLDESGGVVTRTQDFEPGGQVFSRGEWLTIIRVN
                     KSNGAVSSVTTPNYSFLGYSGTMKVTPDRITDYKAPSAEEAAVASQGAKRPPVVNYPG
                     EGFREMTKTQWAALPRDCKAVRSVAETEDHGAYRYRRTMDNNFRLVNVYITDMKITEI
                     PQK"
     gene            2274..2837
                     /locus_tag="RHX79_004592"
     CDS             2274..2837
                     /locus_tag="RHX79_004592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV2199663.1"
                     /translation="MHSQLRERIRLMRARLDNAAPVAEIRAESQLFVSPAPVCDRLVT
                     LAEISNRDHILEPSAGTGAILRAIRDTAPEAMCDAVEINSGLVRYLRENFNGVRVQCG
                     DFMEWQPVQYYSRIIMNPPFSHGQDIRHILRAFSLLRPGGVLVAVCLNGPRQQEKLLP
                     FSDVREELPCGTFAYTRVPTMIIRLRA"
BASE COUNT          707 a          845 c          904 g          615 t
ORIGIN      
        1 gccgccggga tgtaaggggc aacgccgttt cgcgcacgcg ctctccgtcg ttgcggcggg
       61 tccctgctca ttgcctgccg ggtgccacac acccgtatga gtccctgtcg ccgggggctg
      121 atacagccac aacctgccgc actgactgtc cagggtaaat gaacagccca caaaattttt
      181 tacccaaaac ccggtaaaaa attttgcgtt ctgcccagga caggtgcgtc aggccgtggc
      241 agtgatgccc cttgcggcga aggttctcaa acgggtgaag ttcataccac agggaataca
      301 gcagcaggtt cccgcgaaac gtcaaaaccg cggctcccga aactcaacgg gtgatgttct
      361 ttaaaaatca ggatttattt caggctccgg caatacgcat ttatgtgttc tgtcagtcat
      421 ccggctggca ggtaatgaga acgcaggaac agaaggagga aaacaccgta gaacgtcaga
      481 cgcagatatg aaaaaagcag gtcagggacc tgcttaatcc atgccgcaga gactgcacga
      541 acagtttttg cggctccagt caatcgtcat aagaggctaa attatgacaa taagtattgt
      601 ttcaccttcc gcagcggctg taaagccccg ccgtcatccc cgtttcagac gcgaagacat
      661 ccccgcgccg gaaattgacc ccgtgctgaa agccttcggg cgacacatag cccggagttt
      721 tcaccggggg cgtggtgtac acatccccgc catgaaaaac acggccttcg ggcaggtgct
      781 ccgcacactc gaactgaaac gcgcttttaa ctgatgaggt gagccgcccc gcgaggggcg
      841 gcaacagacg gaaggagaac attttatgac attagcagcc atcaccatga ccgccccgga
      901 agccgccagc cctgtgcaga tgtaccgcgc gacctactca ccggatgaca acaaactgcg
      961 cctgtatgcc gcgtcacgtc ttgacccgga gacgtataaa aaagtgcatg atgccggttt
     1021 tcgctgggca cccaaacagg cgctgtttgt cgcgccagcc tggacaccgg gccgggaaga
     1081 cgtgctcctc tcacttgccg gagagattga ggatgaagac agcacgctcg ctgaacgtca
     1141 ggaagcacgg gcggagcggt ttaccggata cagcggaaag cgggccagtg aatccgcaca
     1201 ggcacttgat gaagtggaaa gactggccgc gatgatcccg cccggtcagc ccattcttgt
     1261 ggggcatcac agtgaacgcc gcgcccgtcg tgatgcgcag cgtattgaaa acggaatgaa
     1321 acgtgccgtg atgctctttg aacgtgcgga atactgggag gagcgggcgc ggtcggcact
     1381 gcttcacgcg aagtataaag aacgcccgga cgttcgctgg cgtcgtatca aaaaaatcga
     1441 agctgatttg cgcaaggctg aaaagaccat cgcgcagtcg cagaaatatc tgacgatgtg
     1501 gcgggctgaa tcgctggatc tgaatatggc aaaactcatc agcagtcatg accatatcag
     1561 cgcctgtttc ccgctggata cgtatccgcg cccggcagaa aaaagccagt atgaaggaag
     1621 tcgatcgtta tggtcggccc tggatgatga catcatcacc acggagcagg cccgcgaaat
     1681 tgcgatccgc tgtcatgaac ggcagattca gcatcagcaa cgctgggtta accactatca
     1741 gaaccgcctg atctatgagc gtgccatgct ggacgaaagc ggcggcgtgg ttacccggac
     1801 acaggatttt gagccgggtg gacaggtttt cagccggggc gagtggctga ccatcatccg
     1861 cgtgaacaaa agcaacgggg cggtgagttc agtcacaacg ccgaattaca gttttctcgg
     1921 gtacagcggc acgatgaaag tgacgcccga tcgcatcacg gactacaaag caccatcggc
     1981 agaagaggct gccgtcgcca gtcagggcgc gaagcgtccg ccggtagtca actatccggg
     2041 ggaaggtttc cgggaaatga caaagacgca gtgggccgcc ctgccccggg actgtaaggc
     2101 cgtgcgcagt gtggcagaga cagaagacca cggggcatac cgctaccgcc gcacaatgga
     2161 caataatttc cgcctggtga atgtgtatat taccgacatg aaaatcacgg aaatcccaca
     2221 gaaataaggt atatcccccc gggaaatccc cgggggatga cggagataat gacatgcaca
     2281 gtcagttaag agaacgtatc cggctgatgc gcgcaaggct ggataacgct gcgccggttg
     2341 ctgaaatccg ggctgaatct cagctttttg tgagtcctgc cccggtctgt gatcgcctgg
     2401 tgacgctggc ggaaatcagc aaccgtgatc acattctgga accctctgcc ggcaccgggg
     2461 ccatactgcg ggcgattcgg gataccgcgc cggaggccat gtgtgatgcg gtggagatta
     2521 acagcgggct ggtccggtat ctgcgggaaa attttaacgg tgtcagggta cagtgtggcg
     2581 acttcatgga atggcagccg gtgcagtatt acagccggat cattatgaat ccgccgttca
     2641 gtcacgggca ggatatccgg catatcctgc gggccttttc cctgttgcgt ccgggtggcg
     2701 tgctggttgc cgtctgtctg aacgggccgc gccagcagga gaagctgtta ccgttttctg
     2761 acgtccgcga ggagctgccg tgcggcacgt ttgcttatac ccgtgttccg acgatgatta
     2821 ttcgtctgcg tgcctgatga cacagggctg gcgggaggat aaatgcccgt ctgcccgcgc
     2881 cgggaaaaga ccgcgcgccg gtggcgctga aaggggccgc gctcacgcgc cgcccctttc
     2941 attacgcgga cgttctgatg agggcttctg tcttttcaga cctgtcattt gtctgttact
     3001 gatgatgttg ttgttcctgc tactgctact gctactgcta ctgctactgc tactgctctt
     3061 ctttttcctg c
//
LOCUS       DAPGWB010000279         3050 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.284, whole genome shotgun sequence.
ACCESSION   DAPGWB010000279 DAPGWB010000000
VERSION     DAPGWB010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3050
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.284"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(31..1890)
                     /gene="gss"
                     /locus_tag="RHX79_004593"
     CDS             complement(31..1890)
                     /gene="gss"
                     /locus_tag="RHX79_004593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutathionylspermidine
                     amidase/synthase"
                     /protein_id="HDV2199664.1"
                     /translation="MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVF
                     RSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQ
                     AFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQ
                     WTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLEN
                     KGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLH
                     ATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNAD
                     SASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEE
                     NYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQ
                     IREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLF
                     PHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNI
                     YQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKK"
     gene            2095..2961
                     /gene="yghU"
                     /locus_tag="RHX79_004594"
     CDS             2095..2961
                     /gene="yghU"
                     /locus_tag="RHX79_004594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HDV2199665.1"
                     /translation="MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHP
                     LQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIP
                     ALRDHTHNPPIRVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGG
                     FGHFYHYAPMKIEYAINRFTMEAKRLLDVLDKQLAQHKFIAGDEYTIADMAIWPWFGN
                     VVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDAS
                     DFETNTEDKRQG"
BASE COUNT          722 a          820 c          772 g          736 t
ORIGIN      
        1 ataatcagta cggggttgct acaacatgta ttactttttc accacaatta acggttcaat
       61 atcactctct tttttgatga ccagtgattc atcaccgcgc aaacacgtcc caccgtagtt
      121 gccgccaacg gtgaaggtac atacctgaat gtatttaccg tccactttcg gcaaacacca
      181 cagttgctga tagatgtttt tctgctcggc aaatttaccg ctggttttgt ccagcacctc
      241 ttcatgatgg ctgaccaggt cgatattgct accacagcga ccggcaatcg gtttcactgc
      301 gtaacctgtt ttcaccaatt catcattaac agtgaaatcg gtatccagca ggtaacgatg
      361 gtgcgggaac agcgaccaga ggatcggcag aatcgctttg ttgccgggga tcaccgtcca
      421 cagcggctca aagactagca cttccgggcg cagcaatacg tcgataagac gcacttcgtt
      481 ttgcggatga ccggtacgga ttggcaccgc agcaaactca cggtcgctaa cttcacgaat
      541 ctgatcaaac gcggtttccc acgcccaggt tttccacacg cagttaacca gtcgcccttc
      601 cccatcaatc agttgcccgg cagcatccca gcccagttca tccaatccac gcaagatacg
      661 cgtttcaaag cccgcctggt gcagcgcctg ctccataaac tgcgcgtgat agttttcctc
      721 gatatctttg tcctgcatga tatggacaaa cggacgtgca cgactgtgtt tccaggcacc
      781 agccaattcg ttaatcagcc cttccgccgg attgaagccg ttgcctttat agccctgctc
      841 cgcccaacgt tcgaggatca agccagcttc ggtatgacag gaggcggagt cggcgttgta
      901 ttcgtaaacc ttcaggccac gctcatccat gcagaaatcc atacgaccag tgatcatatg
      961 gtgacggcga cgctgccagg agagacgcaa acgtggccag aggattttcg ggatgtcgaa
     1021 cagcgccagc aggttgtcat ctttcagcac cttgtcggtc gcgtgaagat acatcagatg
     1081 cagctcgttg gtggctttaa ttagctcctg ctcggcactc tcggtaatgg tgtagtaatg
     1141 ataaggatcc tgattgatca cctgaccgtt ggcctgcaca taggcgtttt gcagcggatc
     1201 tttttcatcc agccatttac cgtcaaactg gcctttgttt tccaggcgcg ctccgctgat
     1261 tttcagcagc tcgcctgcaa tttccggctg cggtaagctg tattcagtat cttccgtctg
     1321 gatcatccag cccagaatgg tggtgtcatc aaaagtgtct ttcagggtat agcagccgtt
     1381 ttcgaccacc atctccagct cacgcgtcca ctgttgccct tgcggcaacg gggaatgaat
     1441 cacgttctgt tccgcaatac ggactttgtt gccatgcaat tgggtaatga tggcgacatg
     1501 gccagtgtct ttaaattcac cgcctttatc ccagataaga agcgcacccg cgaccggcgc
     1561 acgcggcgag ccgttaggaa atgcctgcaa tggcaggatg ttgtcattaa ccacttctcg
     1621 caggaagcgc agcgagaaaa tctcccacgc catacccacg tcagtaaaga ccacaccgta
     1681 attcagaaag agaaaacggc gagcaaattc aacgcattgc cacttgtggc ccatatattc
     1741 gtcgtcgata tagctacgga atacggcgtc atcttcgtat tcctgcggat cgagagaact
     1801 gtaatctgaa gagtagattg ctaccccacc tggggcgtag cccaataatg tcccgaacgg
     1861 ggcatcctgg ctggtcgttc ctttgctcat cactttacct ttaacaatac aacctaagca
     1921 gttggcgtaa ttgttgtgct ctgattacct gctcagcgac attaaccgga cagaggtcag
     1981 actaatcata cacctcatcg cagcggctgg cgcaaagggt taaaaaattc acattctgta
     2041 cagcaagtga cctgctacac tgcttcaaca ctaccactca gaaggcaact cactatgaca
     2101 gacaatactt atcagcccgc gaaagtctgg acgtgggata aatccgctgg cggcgcgttc
     2161 gccaatatca atcgcccggt ttctggtccg acgcatgaaa aaacgctgcc cgttggcaaa
     2221 cacccattgc aactttattc gctgggaacg ccgaacggtc agaaagtaac gattatgctt
     2281 gaggagctgc tggcgctggg cgttactggt gcagagtacg acgcctggct gattcgtatt
     2341 ggcgatggcg atcaattctc cagcggcttt gtcgaagtga acccaaactc gaagatcccg
     2401 gcgctgcgcg atcatacgca taatccgccg atccgcgtgt ttgaatctgg ttcgatcctg
     2461 ctttatctgg cggagaaatt tggctacttc ctgccgcagg atttggcaaa gcgtactgaa
     2521 acgatgaact ggctgttctg gttacagggc gcggcaccgt tcctcggcgg tggttttggt
     2581 cacttttacc attacgcgcc gatgaaaatt gagtacgcca tcaaccgctt taccatggaa
     2641 gccaaacgtc tgctcgacgt gctggataag caactggcgc agcataagtt tattgcgggc
     2701 gatgagtaca ccattgcgga tatggcgatt tggccgtggt ttggcaatgt ggtgttaggc
     2761 ggcgtgtatg atgccgcaga gtttcttgat gcgggcagtt ataagcatgt acaacgctgg
     2821 gcgaaagaag taggcgaacg tccggcggtg aaacgtgggc gtattgttaa ccgcaccaac
     2881 ggaccgctga atgagcagtt gcatgagcgc catgacgcca gtgatttcga gacgaatacg
     2941 gaagataagc gtcaggggta agggttggtg ttcgtcgcag caagccatcc aggccggata
     3001 aggcgttcac gccgcatccg gcaatcgtgc acaatgcctg atgcgacgct
//
LOCUS       DAPGWB010000280         3028 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.285, whole genome shotgun sequence.
ACCESSION   DAPGWB010000280 DAPGWB010000000
VERSION     DAPGWB010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3028
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.285"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            54..392
                     /locus_tag="RHX79_004595"
     CDS             54..392
                     /locus_tag="RHX79_004595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000222531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2199666.1"
                     /translation="MGWTAVPSALFFLQGTLSISPVAFNVLLNLLTHWWKAHEWPHPS
                     QESIAVRMSVSVRTVQRGLAELENMGLITRRKTSKEHPKYRGRNVYDLTNLVESLNNL
                     APNIKEKLSQ"
     gene            complement(1085..1234)
                     /locus_tag="RHX79_004596"
     CDS             complement(1085..1234)
                     /locus_tag="RHX79_004596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017880354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199667.1"
                     /translation="MPSEYDEQRDATDALLPGEYDLFDLMAQVTEENLHAPVDFGPPV
                     GREAL"
     gene            1802..1963
                     /locus_tag="RHX79_004597"
     CDS             1802..1963
                     /locus_tag="RHX79_004597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001326446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HDV2199668.1"
                     /translation="MHEPPVQSDYHARSGNYQLESNPERHDKSPVAVAIGNGFRGVSL
                     EVMRLLRLN"
     gene            complement(2126..2644)
                     /locus_tag="RHX79_004598"
     CDS             complement(2126..2644)
                     /locus_tag="RHX79_004598"
                     /inference="COORDINATES: protein motif:HMM:NF025323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafO family
                     toxin"
                     /protein_id="HDV2199669.1"
                     /translation="MSHMPLDTTRIFVHVHPNLQEYPNASLFVEEFEEYKKQAFDYAK
                     ENGCLAADFLPALTEEDQKSLPPDQYLFGRDRLFYRGAAANDPLYHVHIFKPDDEKCV
                     WHDDNGISVNQWWCRSDAALIYAHMDTHSNDFHFLLLEIIDPGAHERYEEKGAIEHWR
                     KLVIAYRAVNDI"
     gene            complement(2681..2833)
                     /locus_tag="RHX79_004599"
     CDS             complement(2681..2833)
                     /locus_tag="RHX79_004599"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199670.1"
                     /translation="MANEVRRTKRLDTRRKPKMTNEQLLAFLAAGINASKNRDYQADI
                     TLEAHH"
BASE COUNT          837 a          683 c          717 g          791 t
ORIGIN      
        1 aaaaaaatcc agaagccgca ttagaagcga aatgggggaa aagcgcatta gctatgggat
       61 ggactgccgt tccttctgcg ttgttctttc ttcaaggtac tctatccata tctcctgtag
      121 cttttaatgt cttactgaat cttttgactc attggtggaa ggcccatgag tggcctcatc
      181 catctcaaga aagcatagct gtaaggatga gtgtctctgt aagaacagtt caacgtgggt
      241 tggctgaatt ggaaaatatg ggcttaataa ccagaagaaa aactagtaaa gagcacccca
      301 aatacagggg gagaaacgtg tacgatttaa ctaatctggt ggaatcgctg aacaatttag
      361 cgccaaatat aaaagaaaaa ttatcacaat aagggtagtt atttaccata acatccgttg
      421 cgtgcaccgc ctgagaggct ctcagggcgt ttctgacggg aaaccggtaa aacaaggcaa
      481 caaaccaccc gaaaacccgc cagaaacgcg caggctctgt ttttacggca tgcatgagta
      541 tgcgcgcaag tgcatagcgc agaatttcac gccgtgcagc cagtggaagt cctgtttccg
      601 gcgttcttct catccgaaaa cggtgaacgg ggacgcaatt tattgcgtga ccgtgaagcg
      661 ttggcaagag catcaagcat gaagagaagg gggtcggatg tacgaatggt tcagagaact
      721 gttatgacgt aattcagtag taattcagta gtaaatcagt agtgtttctg tagtttatta
      781 gtagtcagga ggaataagct gttcatacaa gtatgaacga gctagttatg gacgcttttt
      841 ttcacagatc tcctcagaat aggcaaagct cagcccggta aggagatgat tctttatccc
      901 ttaaatggcc atacaccata cgcaaccgcg attttcatcg caattgcatg aattaaaagg
      961 taaaaactga agttcccgtt tatttatgta atacgcaacg tattacaacc acctgtaatc
     1021 acatgaaaat aaagaaataa gatgtaatac cggcgtatta cacgtacgcg ggtaagcgaa
     1081 aaagctataa cgcttcacgg ccgacaggtg gcccaaaatc caccggggcg tgcaggttct
     1141 cttcagtaac ctgcgccatt aaatcaaaaa ggtcatattc gccgggaagc agagcatcag
     1201 tcgcatcccg ttgttcatca tactcagatg gcatgttgtg atatccagta gctgaggggt
     1261 gttagcgggt ttcggggcgc agccctgaac cagtcacgca gcgctagcgg agtgtatact
     1321 ggcttagtat gttacgacgg ggtgagggtt caggaaagtg cttcatgtgg caggagaaaa
     1381 atgcagcagc ggagcgtcag cagaatatgt gatacaggat atattccgct tcctcgctca
     1441 ctgactcgct gcgctcggtc gttcggctgc ggcgagcggt accaacttac aggcggggcg
     1501 gaaatttcct gggagatgcc aggaagaagc ttaacggaga agcgataagg ccacggcgaa
     1561 gccgtttttc cataggctcc gcccccctga caagcatcac gaaatctgac gctcaaatca
     1621 gtggtggcga aacccgacag gacttaaaga taccaggcgt ttccccctgg tggctccctc
     1681 gtgcgctctc ctgttcctgc ctttcggttt accggtgtca ttccgctgtt atggccgcgt
     1741 ttatctcatt ccacgcctga cactcagttc cgggtaggca gttcgctcca agctggactg
     1801 tatgcacgaa ccccccgttc agtccgacta ccacgcccgt tccggtaact atcaacttga
     1861 gtccaacccg gaaagacacg acaaatcgcc agtggcggta gccattggta acggatttag
     1921 aggagttagt cttgaagtta tgcgcctgtt aaggctaaac tgaaaggaca gatttggtta
     1981 ctgcgctcct ccaagccagt taccgcggtt caaagagttg gtagctctga gaaccttcga
     2041 aaaaccgcct tgcagggcgg ttttttcgtt tggattgagg gtaatactta ccaaagcaat
     2101 acgtcaacaa ctcatttttc attgcctaga tatcattcac tgctcggtag gcgataacca
     2161 gctttctcca gtgctctatt gcaccttttt cctcatatct ctcgtgagcg ccgggatcaa
     2221 tgatttcaag caaaaggaag tggaagtcat tgctatgcgt atccatatga gcataaatca
     2281 atgccgcatc actgcgacac caccattgat taacgctaat accattatca tcatgccaga
     2341 cacacttttc atcatccggc ttgaagatat gaacatgata taggggatca tttgcagcag
     2401 cccctctata aaaaagccta tccctaccaa atagatactg atcaggaggt aatgattttt
     2461 gatcttcttc agtcaaggcg ggaagaaaat cagcagctag gcacccgttc tcttttgcgt
     2521 aatcaaaagc ctgttttttg tattcttcga actcttctac aaaaagagag gcgtttggat
     2581 actcctgaag gttaggatgc acatgtacaa aaatacgagt tgtatcaaga ggcatgtggc
     2641 tcatgaatcc ctgcggtttt tacagggatt ctaccacgtt ttaatggtgg gcttctaaag
     2701 tgatatcagc ttggtagtca cgattttttg acgcattaat gcctgcagcc aaaaaagcca
     2761 gtaactgttc gtttgtcatt tttggcttac gacgcgtatc taaacgcttc gttcttctaa
     2821 cttcattagc catatcgaaa ccttaagctt cacgcttgtg tgtggctagg gaaaatgcct
     2881 gtcgttaagt gaagtataga agaaaacaac ttttagttta gcgcgtacgt gtcgtactaa
     2941 ttatataatt ataatactca caatgctaag atgacgggaa tcctttagga ttcccgtcat
     3001 cttagcattg tgagtactgt catgtcag
//
LOCUS       DAPGWB010000281         3016 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.286, whole genome shotgun sequence.
ACCESSION   DAPGWB010000281 DAPGWB010000000
VERSION     DAPGWB010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3016
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.286"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(940..2040)
                     /locus_tag="RHX79_004600"
     CDS             complement(940..2040)
                     /locus_tag="RHX79_004600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication protein"
                     /protein_id="HDV2199671.1"
                     /translation="MDHQLESIDGTIMSKRTKDKDLEKLDVIKDSPQMSLFEIIESPA
                     KKDDYSNTIEIYDALPKYIWDQKREHEDLSNAVVTRQCTIRGQHFTVKVKPAIIEKDD
                     GRTVLIYAGQREEILEDALRKLAVNGKGHIIEGKAGVMFTLYELQKELSKMGHGYNLN
                     EIKEAIQVCRGATLECISDDGEAFISSSFFPMVGLTTRGEFRKKGGNARCYVQFNPLV
                     NESIMNLSFRQYNYKIGMQIRSPLARYIYKRMSHYWTQASPDSPYTPSLISFLTQSPR
                     ELSPRMPENVRAMKLALEALIKQEVISDYDANQIKDGRRVIDVRYVIRPHENFVKQVM
                     ASNKRKQQTELRAIKHGMIDHDIIDEPQRKGR"
     gene            complement(2025..2312)
                     /locus_tag="RHX79_004601"
     CDS             complement(2025..2312)
                     /locus_tag="RHX79_004601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199672.1"
                     /translation="MTASVAATELAKLGKCEAMIKKVASHPRPALSKRPQSPQGTDST
                     LRGEFAHFRYEAAALRFMSGTAGAKRRIYQLVFSATVAAGALTMLAAWTTS"
     gene            complement(2317..2856)
                     /locus_tag="RHX79_004602"
     CDS             complement(2317..2856)
                     /locus_tag="RHX79_004602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199673.1"
                     /translation="MSLPTERWLDLLDPKLEEERSEITEDLLEAEGREFVAEVRSKLD
                     HALAVLAVEAQQEADMYWNAHKSAREEASEDEQGRVGTRVRILGVSLVAEWYRNRFVE
                     QVPGQKKRVLSTHIKKGRGHAYSMSHFKKEPVWAQELIQQVETRYAVLRQRATALAKI
                     RRALNEYERQLNKTHSDEV"
BASE COUNT          592 a          836 c          695 g          893 t
ORIGIN      
        1 ttaggcgttc taaatcacca ctcaacacat tgatattact ggtgttttca tatttattcc
       61 gtgcaacaaa cccataggtt gccgtgcagc gttcccatag gttgccgtgc aacgtcccca
      121 catacccttg gatcttatcc actgttatcc acacggaacc cctctttttt ccacaaaatc
      181 cttacaaaac agagctttcg tgcagcgttc ccacatatca gatctggtgt tcgtgcagta
      241 ttcccacatg tctaaggtca tacgtgcagt cgccccatat acaattttct gaacgtgcaa
      301 cgtacccaca tgtcaatttt ggtcgttttt tgcaccgtgc agcgtaccca catatgatcg
      361 tgcagcgttc ccatatacca aaaccccgtt tatgcacagg aaatgtggat aacttttggc
      421 ctctttttgt gtgcgcgtga tcactttatg gactattaga gtcattttga ctgctttttt
      481 aggtttgtcc tgatctgtca atctttgttc tgcttcgtca atcgtgcaga gttcccatat
      541 atcgagaggt tcaggacctg ctttcgtgca acgtacccac atatcaaatc tcataacgtg
      601 caggtccccc acatcctcac cctttaacta tcaatacctt acgggaacca ctctacggga
      661 accactggag cagcatggca cttatccttc gtcgtggctt acgcttgcac gatactgaga
      721 ctcagcttgc gactaccgtg cagcgatccc atatatagag ccccagccca cgctgcatct
      781 ggggtcacgt tcgctctatc cgtgcagctc ccccatatgc ggaggcattc cgtttccggt
      841 cctgcctggt gggcgtacct tgtgcgcttt cttctggcat aaaaaaaggc gctgacgcgc
      901 ctatctttct tttccctggg gggtgggaga ttctggtggc tatctcccct tacgttgggg
      961 ttcatcaatg atgtcgtggt cgatcatgcc gtgcttgatg gcccgtagct ctgtctgctg
     1021 cttacgcttg ttggacgcca tcacctgctt cacgaagttc tcatgaggcc ttatgacgta
     1081 ccgcacgtcg atgactctgc ggccatcctt gatctggttc gcgtcgtagt cgcttatgac
     1141 ctcttgtttg atgagggcct ccagagcgag cttcatggct ctgacgttct ccggcatccg
     1201 tgggctcaat tcacgagggc tctgggtcag gaagctgata agcgatggcg tgtacggcga
     1261 atctggtgat gcttgagtcc agtagtggct cattcgcttg tagatgtacc gtgcaagagg
     1321 ggagcggatt tgcattccga ttttgtagtt gtactgacga aacgacagat tcatgatcga
     1381 ttcgtttacc agcgggttga actgcacata gcacctggcg ttcccgcctt tcttgcgaaa
     1441 ctcacctctg gtggtcagtc ccaccatcgg gaagaagctg gagctgatga aggcttcacc
     1501 gtcatcactg atacattcga gtgttgcgcc acgacaaacc tggattgctt ccttgatttc
     1561 gttcaggttg tacccgtgac ccatcttcga gagctctttc tggagttcgt acagagtgaa
     1621 catgactcca gccttgccct cgatgatatg gcctttcccg ttcactgcga gcttgcgtag
     1681 agcatcctca aggatttcct ctcgctgtcc cgcgtagatc agcacggttc ttccgtcatc
     1741 cttctcgatg atggctggct tcaccttcac cgtgaaatgc tggcctctga tggtgcattg
     1801 tcgtgtcact acagcgttgg ataaatcttc atgctcacgc ttttggtccc aaatgtactt
     1861 cggcagcgca tcgtagatct cgatggtgtt ggagtagtcg tctttcttgg ccggagattc
     1921 aatgatctca aacaggctca tttgcggtga gtctttgatt acgtcgagtt tctccaggtc
     1981 tttgtctttg gttctcttgc tcatgattgt tccgtcgata ctttctagct ggtggtccat
     2041 gccgccagca ttgtcaatgc tcccgctgct accgtcgctg aaaacactag ctggtagatg
     2101 cgacgcttag cccccgcagt gccgctcata aaacgcaggg ctgccgcttc atatcggaaa
     2161 tgagcgaact caccccgaag ggtgctatct gtcccctgtg gcgattgtgg gcgctttgac
     2221 agggcagggc gaggatggct ggcgactttc ttgatcatcg cttcacattt ccccagtttc
     2281 gccaattcag tggccgctac agatgctgtc atgttgtcac acctcgtcgc tatgtgtctt
     2341 gtttagctgg cgctcgtact cgtttagcgc ccggcgaatt tttgctaagg cagtggcgcg
     2401 ttgtcttaac acggcatacc tggtttcaac ttgctggatc aactcttgtg cccagacagg
     2461 ctctttcttg aagtgcgaca tgctgtaggc atgaccgcga cccttcttga tatgtgtcga
     2521 tagaaccctt ttcttttgtc cgggaacttg ttcgacaaat ctgttgcgat accactctgc
     2581 aacgagtgat acgcctagaa tgcgaacccg tgtaccgaca cgcccttgtt cgtcctctga
     2641 cgcttcttca cgcgctgatt tgtgcgcgtt ccagtacatg tccgcttcct gctgcgcctc
     2701 gacagcaaga accgctaagg cgtgatccag tttgctccgt acctctgcaa caaactctcg
     2761 tccctctgcc tctagcagat cctctgttat ctcggatcgt tcttcttcga gcttcggatc
     2821 tagcagatct agccatcgct ctgttggtag actcacctca ataccctccc aattcctatc
     2881 caattcctat ccacataact atctatctgg aatttaaagc tgattattcc aatactggaa
     2941 tctagttctg tcactaggct aacccatctt tggaatttgt caaatttccc tctatctatc
     3001 tggaatcttg atgctc
//
LOCUS       DAPGWB010000282         3013 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.287, whole genome shotgun sequence.
ACCESSION   DAPGWB010000282 DAPGWB010000000
VERSION     DAPGWB010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3013)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3013)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.287"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(345..1181)
                     /locus_tag="RHX79_004603"
     CDS             complement(345..1181)
                     /locus_tag="RHX79_004603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HDV2199674.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(1181..1984)
                     /locus_tag="RHX79_004604"
                     /note="aph(3'')-Ib"
     CDS             complement(1181..1984)
                     /locus_tag="RHX79_004604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HDV2199675.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            complement(2045..2860)
                     /gene="sul2"
                     /locus_tag="RHX79_004605"
     CDS             complement(2045..2860)
                     /gene="sul2"
                     /locus_tag="RHX79_004605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HDV2199676.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
BASE COUNT          688 a          868 c          856 g          601 t
ORIGIN      
        1 ctggcgctcg cgggcgaggt ccagggcggc cgtcttcacg ttctgccttg cgcagatgag
       61 atagatctag cgtggactca aggctctcgc gaatggctcg cgttggaaac tttcattgac
      121 acttgagggg caccgcaggg aaattctcgt ccttgcgaga accggctatg tcgtgctgcg
      181 catcgagcct gcgcccttgg cttgtctcgc ccctctccgc gtcgctacgg ggcttccagg
      241 ggtcgtttgc gggaaggggc ggaatcctac gctaaggctt tggccagcga tattctccgg
      301 tgagattgat gtgttcccag gggataggag aagtcgcttg atatctagta tgacgtctgt
      361 cgcacctgct tgatcgcggc cgcgatagct agatcgcgtt gctcctcttc tccatccgcg
      421 ttccaagctg cggaaaggca cccataagcg tacgcctggt cgagcaggcg acgcggatcg
      481 acgtccagcg cacgagagaa tgcgtccgcc atctgtgcaa tgcgtctagg atcgagacaa
      541 aggtcgtctc tgtcagccgg atcgtagaac atattggcgg cgccaaagcc cacttcaccg
      601 accagaccga cgggatctat caccagccag ccgcgactgg agaacatgat gttttcatga
      661 tgcagatcgc catgtagccc acgcagttcc gaggcattgc tcatcatttg atcggctata
      721 atcgccgcgt ggacgtagtc agtttgacaa cctgcgtttt gatcatcgcg cgcccgctga
      781 aacaaagctg caaagcgatc ccggatcggg agaagggcag aaggcagggg ttcctcagat
      841 gcggcataca gcttcgccat tagttccgct gcaatttcgg tcgcctggta gtcgccgtgc
      901 tcggcaacga tgtgagagag cattcgctcc ccggcatatt cgagcaacat cagattgttc
      961 tcacgaccga gcaaccggac tgctcccctc ccattgcgcc ataccagata gtcggccccg
     1021 cgcagttcat cagcaatgtc ttctataggt ttcaatccct tgacgattgc aggagtcccg
     1081 tctggcaatg aaactttcca aacgaggctg gaaaaggtgt ccgcaatgag aacaggttgc
     1141 gaaacgtgcc aatgagcagg aaaaacaggc ggcatgaaca tcaaccccaa gtcagagggt
     1201 ccaatcgcag atagaaggca aggcgttcgc ggtcgggggc ttcgatcccc aatacattga
     1261 ataggacagc gaaggcgcgc tctgcttcat ctggcgctgc ccagttctct tcggcgttag
     1321 caatcatgag tgccaaatcg gcatagcgat ctgctgttcc gagccgccca aggtcgatca
     1381 gacccgtgca ttgaagagtt ttagggtcca ccatgaagtt cggcatgcag ggatcaccat
     1441 ggcaaacaac catatcggtg cgctcttggt cgagccgcac cggtagctct cgttcgacac
     1501 gagccaaaag atcgagctgc ggcgtactct tgtcctcgtc cggtaagaag tcgggattga
     1561 cggcattgcg ggacaccaca tcaacggcgc gtccgaacat tcgcgacagc ctgcgctcaa
     1621 acggacattg atcaaccgat aggctgtgaa cagcgccaag ttgctgcccc attgacggcc
     1681 acgctttgag caaatccgct ccagacagat cagccgccgg tactcccgga attgccgtta
     1741 tcaccaagca tgcaccctcc tgttcctcct gccagttgat gacctcgggg caagccacac
     1801 ctcgaccttt gagccaaatg aggcggtcac gctctccagc gagctcaccg cggcgggaag
     1861 caggtgcgat tttcgcgaag gcatgcccgt caccacgtcg aaaaacaaaa tcaccagatt
     1921 ctccgcctct gacaggcaac cagtcagaat gcgattcacc aaaaaaaata ttagttcgat
     1981 tcaatggagg ttccttcagt tttctgatga agcgcgaata tagagaaata tcccgaatgt
     2041 gcagttaacg aattcttgcg gtttctttca gcgccgccaa taccgccagc ccgtcgcgca
     2101 aggggcgcgg ctcgtgtgtg cggatgaagt cagctccacc tgcggcggcg gcaagctctg
     2161 cagcgagtgt cgcggccccg acatcccccg gaccacggcc tgtgagcgcg cgcagaaagg
     2221 atttgcgcga aacagacaga agcaccggca aatcgaagcg cagccgcaat tcatcgaacc
     2281 gcgccagcac cgagagcgag gtttcgggag cagcccccag aaaaaacccc atgccgggat
     2341 caaggacaag gcggttgcgt ttgataccgg cacccgtcag cgccgcgatg cgcgcgtcaa
     2401 agaacgccgc aatgtgatcc atgatgtcgc cagcgggtgc ctcgcgccga tctgcctgcc
     2461 cgtcttgcac cgaatgcata acgacgagtt tggcagatga tttcgccaat tgcggataga
     2521 acgcagcgtc tggaaaaccg cgaatatcat tgagataggc cacaccacgc gacaaggcat
     2581 aggcttgcgt cgcgggttga taactgtcga gcgagacggg aatgccatct gccttgagcg
     2641 cgtccagcac cggcgcgata cgcgcgattt ctgtgtcgga cgaaacaggc gcggcgtcgg
     2701 gattgctgga tgccggaccg aggtcgatca catctgcccc ctcggccatc agcttacgcg
     2761 cctgcgcaat ggctgcgtct ggcgccagat accggcctcc atcggagaaa ctgtccgagg
     2821 ttatgttgac gatgccgaaa atgatgagcg atttattcat gggggcttct ataataataa
     2881 taatcgagca tgagtctcat acggatgctc gggtcgaaag ggaatcccca ggcgagtaac
     2941 ctgtttgcgg tgatccatta gctgcaggag cagaatagca tacatctgga agcaaagcca
     3001 ggaaagcggc cta
//
LOCUS       DAPGWB010000283         2997 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.288, whole genome shotgun sequence.
ACCESSION   DAPGWB010000283 DAPGWB010000000
VERSION     DAPGWB010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2997
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.288"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(52..231)
                     /locus_tag="RHX79_004606"
     CDS             complement(52..231)
                     /locus_tag="RHX79_004606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001695639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3606 domain-containing protein"
                     /protein_id="HDV2199677.1"
                     /translation="MADDKTKIGTPDNDLISIKQDYERRDWAEKFGVSEAKLVQAVQA
                     VGHSAKKVQAWLKDH"
     gene            720..1412
                     /locus_tag="RHX79_004607"
     CDS             720..1412
                     /locus_tag="RHX79_004607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001572865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199678.1"
                     /translation="MIEFIAEHINTVSTLISALAALLTAVATFFLWRVTRLLADETKR
                     MVDASVQPHVVVTLEPNSWAAFYFDINIANTGNAPAYDIEIGFNPPLVNAEHRKNIGI
                     PFSKVSVLKNGHSLNSSLCKYEQIKDQVYSVSISWSKQPGSTERERNEYSYDMASFEG
                     VSYLGARSPMTQIAEQVKKIREDWRPISHGSKKIKTDNYNSSDRAEEQRVREEWYQTT
                     AKKWDKEKQKDN"
     gene            complement(1742..2533)
                     /locus_tag="RHX79_004608"
     CDS             complement(1742..2533)
                     /locus_tag="RHX79_004608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013359108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199679.1"
                     /translation="MGPLIITVILVCGFWYTENHYQSRIHHARTNGWSSYFYVAMHGC
                     RFVAQGFLLTLGIYMLFWLLNSIPHIINIFRDKPIEWHFFNWLLETKVMELPLFAVIT
                     IIFACCIAYSEGVDARKEMENEEARQKAYREMASKDSLENLLIQAIDTEMLIFVTLKS
                     RKVYIGYVAAPRVEFHNSAHLEIIPFISGYRDKDSLRYIEQHRYYDLYLSKEITFESE
                     PLNLQHFRHVIPIEQIEAISLFDESTYSDFERFSEPMPDTKQLPV"
     gene            complement(2533..2751)
                     /locus_tag="RHX79_004609"
     CDS             complement(2533..2751)
                     /locus_tag="RHX79_004609"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199680.1"
                     /translation="MPTLIGKVLRRYTSAVATHVDTHLEQTTKYRLTVDANGNATLNI
                     ENPEVQADIIKKMKQLRKLHNRTDKEVA"
BASE COUNT          894 a          616 c          626 g          861 t
ORIGIN      
        1 aatcatctcc aaaaggacaa agaaaaaagc gcctagaaag gcgctcatat attaatggtc
       61 tttaagccat gcctgtactt tcttagccga atgacctaca gcctgtacgg cttgaacaag
      121 tttggcctcg ctaactccaa acttttcagc ccaatcacgt ctttcgtaat cctgtttgat
      181 acttattaaa tcattgtcag gggtaccgat tttggtctta tcatcagcca ttttactgat
      241 tcctcgtgat acaggcttat acctgcccat tagttatatg actcccgtgc cgcttcgtaa
      301 acgttcaata attaaacaat tgacgctgat cataaaacca gttaaaggat ttgactctac
      361 cttggatata tgatgccacc ccctttatat tgttgtcggt aattcacagg cattgaactc
      421 atgctggtga gtgaaaggcc acataaacgc ccaacattta aactgctctc agcagcgttc
      481 gcggagcaat atacaggctt cgtattcaat ccttccccta cgagaaatcc tagccgctac
      541 ctcgttttca agtgtcagta agttctttgt cagacatcat acagccttga gctgggtgag
      601 gtgcatgggg gaagctgaag ccttaactgt tgaggtaaat cgaaccataa gtgtgcaatt
      661 tttcaagccc ggcgctattt tagtcttgaa aacaattagt acgcccccaa ggacaactca
      721 tgatcgaatt tatcgcagag catataaaca cagtaagcac acttatctcc gctttggcag
      781 cattgctaac agcagttgct acatttttct tgtggagagt aacaaggcta ttagcagacg
      841 agacaaaaag gatggttgac gcatcagttc aacctcacgt cgttgtgact cttgaaccaa
      901 attcttgggc tgctttttat tttgatatca atattgctaa taccggaaat gccccagcct
      961 atgatattga aatcggattt aatcccccac tggtaaatgc tgaacataga aaaaatatag
     1021 gtataccatt tagcaaggtt agcgtattaa aaaacggcca ttcgctcaac agcagtcttt
     1081 gtaagtatga acagattaaa gatcaagttt attctgttag tattagttgg tctaaacagc
     1141 cgggctcaac tgaaagagag cggaatgagt attcttatga tatggcttct ttcgaggggg
     1201 ttagctactt aggtgcaagg agtccaatga cacagatagc cgagcaggtg aaaaagatta
     1261 gagaagactg gaggccgatt tcccatggaa gcaaaaaaat taaaacagac aactataatt
     1321 caagtgacag agccgaggaa caacgagtac gtgaagagtg gtatcagacc actgcaaaga
     1381 aatgggataa agaaaagcaa aaagataact aatacaattg acctgatccc cataaattag
     1441 cataccacaa tctcaggtcc gctcttcgct cacagcggac cttcagctcc ggtaacttat
     1501 ccacttcgtg caaatttctc tcataaggga caaccatact caaatctccc acatttcagg
     1561 aggtatgagt atgagcacgt caccgtggaa caaagaccag atggtccgtt taagcgggat
     1621 acttacaatc taacttctgt tgggtcaagc cctgaaagcc gcttaacatg aactgtccaa
     1681 ctttataggg gcagtccagt tgtagcggct ttttagtata tcgttagagg ggggggtaat
     1741 actatactgg taattgcttt gtgtcaggca ttggctcgga aaatctttca aaatcgctgt
     1801 acgtgctttc atcaaagagc gagatcgctt caatttgttc gataggaatg acgtgtcgaa
     1861 aatgttgtaa atttaatggt tcggactcaa atgtgatttc tttggataga tagagatcat
     1921 agtatcggtg ttgttctatg tagcgtagtg aatccttatc tctgtaacca ctaatgaatg
     1981 gtatgatctc aagatgcgca ctgttgtgga attcaacacg tggtgctgcc acatacccga
     2041 tatatacttt tctggatttt agtgttacaa aaatcagcat ctctgtgtca atggcttgga
     2101 tcaataggtt ttctagtgaa tcttttgatg ccatctccct gtaagccttt tgccgcgctt
     2161 cttcattctc catttctttt cgcgcatcca ccccttcaga gtaagcaata caacaagcga
     2221 aaatgatggt gatgacagca aaaagtggta attccatcac tttggtttca agtaaccaat
     2281 taaaaaaatg ccattctata ggtttgtctc ggaaaatatt gattatgtgt gggatagagt
     2341 tcagtagcca gaaaagcatg tagatcccga gcgtcaaaag aaatccttga gcaacaaaac
     2401 gacacccatg cattgcaacg tagaaatagg atgaccaccc atttgttctt gcgtgatgaa
     2461 ttctcgattg atagtgattc tcggtgtacc aaaaaccaca cacgagaatc acagttataa
     2521 tcaatggacc cattaagcaa cttccttgtc tgtacggtta tgtagttttc gcaattgttt
     2581 cattttcttg atgatgtctg cttgaacttc tgggttttct atgttcaggg tggcattacc
     2641 gttcgcatca actgtaagac gatattttgt cgtttgctca agatgggtgt caacatgggt
     2701 tgctacagca cttgtgtatc gacgaagcac ttttccgata agtgtgggca tatgcatctc
     2761 tccattgtta gtgactaact tttattacat gttatttact atatagacaa cgaaaagaaa
     2821 ataaagttgt agtatcgaat gaactagagg ggagggtaag taaaatcgct gcgggtgctt
     2881 gaggctatct gtctcaggca tgaacatcaa aaggcagata aagaaaagcc cagttaacat
     2941 tacgcgtcct gcaagacgct taacattaat ctgaggctca atctatgaac ggcaaat
//
LOCUS       DAPGWB010000284         2992 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.289, whole genome shotgun sequence.
ACCESSION   DAPGWB010000284 DAPGWB010000000
VERSION     DAPGWB010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.289"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(152..228)
                     /locus_tag="RHX79_004610"
     tRNA            complement(152..228)
                     /locus_tag="RHX79_004610"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(192..194),aa:Asp,seq:gtc)
     gene            complement(361..1092)
                     /gene="dnaQ"
                     /locus_tag="RHX79_004611"
     CDS             complement(361..1092)
                     /gene="dnaQ"
                     /locus_tag="RHX79_004611"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HDV2199681.1"
                     /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT
                     GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF
                     DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
                     LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT
                     DEELAAHEARLDLVEKKGGSCLWRA"
     gene            1157..1624
                     /gene="rnhA"
                     /locus_tag="RHX79_004612"
     CDS             1157..1624
                     /gene="rnhA"
                     /locus_tag="RHX79_004612"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDV2199682.1"
                     /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTN
                     NRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVD
                     LWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV"
     gene            complement(1621..2343)
                     /locus_tag="RHX79_004613"
     CDS             complement(1621..2343)
                     /locus_tag="RHX79_004613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414749.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV2199683.1"
                     /translation="MKPARVPQTVVAPDCWGDLPWGELYRKALERQLNPWFTKMYGFH
                     LLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPW
                     CTDPHRLLREADRVLIDDGWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQL
                     DWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQ
                     SKNKPRIRQAVGATRQCRKPQA"
     gene            2377..>2992
                     /gene="gloB"
                     /locus_tag="RHX79_004614"
     CDS             2377..>2992
                     /gene="gloB"
                     /locus_tag="RHX79_004614"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HDV2199684.1"
                     /translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAITANNW
                     QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF
                     SVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTL
                     VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPV"
BASE COUNT          816 a          721 c          702 g          753 t
ORIGIN      
        1 tattgaattt taatgaatga gacaacaagc gagaatcacg cacttacgcc agaataaaat
       61 cattgaacag agaaatggtg gaattcaaat acaaaaaaac cgcaaaatta aaaatcttgc
      121 ggctctctga actcattttc atgagtgaat ttggcggaac ggacgggact cgaacccgcg
      181 accccctgcg tgacaggcag gtattctaac cgactgaact accgctccgc gttgtgttcc
      241 gttgggaacg aggcgaatat tacggattgc ctcacccttc gtcaacggtt tttctcatct
      301 tttgaatcgt ttgctgcaaa aatcgcccaa gccgctattt ttagcgcctt ttacaggtat
      361 ttatgcccgc cagaggcagc ttccgccctt cttctccacc agatcaagac gggcttcatg
      421 agctgcaagc tcttcatctg tcgcaaaaac aacgcgtaac ttacttgcct gacgtacaat
      481 gcgctgaatt gttgcttcac cttgttgctg ctgtgtctct ccttccatcg caaaagccat
      541 cgacgtttga ccaccggtca tcgccagata aacttccgca aggatttggg catcgagtaa
      601 tgccccgtgc agcgttcgtt tactgttatc tatttcgtag cgggcacata acgcatcgag
      661 gctgttacgt ttaccgggaa acattttcct cgccaccgca aggctatcgg tgaccttaca
      721 gaaggtatta gtcttcggaa tatcgcgctt aagcaacgag aactcgtagt ccataaagcc
      781 gatatcgaac gctgcgttat ggatcaccaa ctccgcgccg cggatatagt ccatgaactc
      841 atcggctact tcggcaaacg tgggcttatc gagcaaaaat tcatcggcaa taccatgtac
      901 gccaaaggct tccggatcca ccagccgatc gggtttgaga taaacatgga agttattgcc
      961 cgtcaggcga cggttcacca cttcaacggc accaatctca atgatcttgt ggccttcata
     1021 gtgcgcacca atctggttca taccggtggt ttcggtatcg agaacgatct ggcgtgtaat
     1081 tgcagtgctc atagcggtca tttatgtcag acttgtcatt ttacagttcg attcaattac
     1141 aggaagtcta ccagagatgc ttaaacaggt agaaattttc accgatggtt cgtgtctggg
     1201 taatcctgga cctgggggtt acggcgctat tttacgctat cgcggacgcg agaaaacctt
     1261 tagcgcaggc tacacccgca ccaccaacaa ccgtatggag ttgatggccg ctattgtcgc
     1321 gctggaggcg ttaaaagaac attgcgaagt cattttgagt accgacagcc agtatgtccg
     1381 ccagggtatc acccagtgga tccataactg gaaaaaacgt ggctggaaaa cagcagacaa
     1441 aaaaccagta aaaaatgtcg atctctggca acgtcttgat gctgcattgg ggcagcatca
     1501 aatcaaatgg gaatgggtta aaggccatgc cggacacccg gaaaacgaac gctgtgatga
     1561 actggctcgt gccgcggcga tgaatcccac actggaagat acgggctacc aagtcgaagt
     1621 ttaagcctgt ggtttacgac attgccgggt ggctccaacc gcctggcgaa ttcgtggctt
     1681 gtttttactc tgtttcatcg gatttagcgt taaaggaata gtccgtttcc gggcaacaat
     1741 aagttgtaag caaccaagcg caggaatatg cgcattcaat agttttcctc cgtgtttgtt
     1801 ccacgggaga acgtggaaac ggctggcgtg tagcacttca aaattcaaca aagagagcca
     1861 gtccagttgc cgcatcagag taaacatccg gctattatag ggcgaggttt tgcgcaatac
     1921 cggcacaagt ttgcgtaatc ccattaaact gatgggattg aagccactaa tgaccagcca
     1981 gccatcatca atcaataccc gatcggcttc acgcaataaa cgatgcggat cggtgcacca
     2041 cggcaatgta tgtgccagta gacaaacatc aacggattta tcggcaaaag gaagatgaag
     2101 tgggtccgcc tgtacctgga cgggcattcc ttgcgcagaa acattcactt gatgagaaac
     2161 cgcgcacgct tcgcaattga tttctgcgct taaattgcca atcttaagca gatgaaaacc
     2221 atacatttta gtgaaccacg ggttgagctg gcgctccagc gccttgcgat aaagctctcc
     2281 ccagggcaaa tcgccccagc aatcaggagc cacgacagtt tgagggactc ttgccggttt
     2341 catcacaacc ttccgtttca cactaagagg taatctatga atcttaacag tattcccgcc
     2401 tttgatgaca attacatctg ggttttgaat gatgaagcag gtcgctgcct gattgtcgat
     2461 cccggagacg cagagccagt attaaacgcc attaccgcca ataactggca accggaggcc
     2521 atatttctca cccaccatca tcacgatcac gttggcggcg taaaagaact ggtggaaaag
     2581 tttccgcaaa ttgtggtgta tggtccacaa gagacacaag ataagggaac aacacaggta
     2641 gtcaaagatg gcgaaactgc cttcgttttg gggcatgaat ttagtgtaat tgccacaccg
     2701 ggtcacactt taggacatat ctgttacttc agtaaacctt atctattttg cggcgacacg
     2761 ctgttttctg gtgggtgtgg taggttgttt gaagggacag catcacaaat gtatcaatca
     2821 cttaataagt taagtgcgtt acctgacgat acattggtat gttgtgctca tgaatatacg
     2881 ttatcaaata tgaagtttgc tttgagtatt cttccgcacg atttgtccat aaatgattat
     2941 tatcgtaaag ttaaggagtt acgggcaaaa aatcaaataa cactacccgt aa
//
LOCUS       DAPGWB010000285         2991 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.290, whole genome shotgun sequence.
ACCESSION   DAPGWB010000285 DAPGWB010000000
VERSION     DAPGWB010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2991
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.290"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            198..950
                     /locus_tag="RHX79_004615"
     CDS             198..950
                     /locus_tag="RHX79_004615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation initiation protein"
                     /protein_id="HDV2199685.1"
                     /translation="MTTVNQIPDANITPSLPPKIREAVDKVKVAKAVWQEERRKQTEA
                     AAMIETIRKRQEDTKTETQALNDEWRNLFRENQGNMTPRMKKLRAEIALGRETLDEFE
                     DLLAAQAAENEFLPWKTADAANHYISEHNRLIETHAVWLWNEFMKEHGQKLIQILGLL
                     KMTLGRSASAVIGVVHTVNDPESVLKQFISEQLTTPALSCNVSSTDDITLPGISIYAD
                     DKAIQDARQSPSPAARSRMLKQRDMVKGGEKK"
     gene            947..1501
                     /locus_tag="RHX79_004616"
     CDS             947..1501
                     /locus_tag="RHX79_004616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000991128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage polarity suppression protein"
                     /protein_id="HDV2199686.1"
                     /translation="MNAGSITQEALNDYRSAIKSWLTLRNTQSTCQLRLAALLDTEEK
                     PAAYASQLEDLRERLAVLEWQINCAARDGLYAHQIVLESCVTSATENFMSEHGDALTD
                     ALAPFLCAPYGLEAAMKILRTAVARQTEVRTPVISAAYKSIIDETGLTVDASMCADAS
                     ASFTPAQHKVFLARLNRLNEKGGY"
     gene            1503..1775
                     /locus_tag="RHX79_004617"
     CDS             1503..1775
                     /locus_tag="RHX79_004617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HDV2199687.1"
                     /translation="MALKCPECGTVAHARTSAYEAPSVKRSWYQCQNLECSCTFTALE
                     SVDTIIMKPWRNERESDKAQMPEKQQQTLNRYGSASKLSSRQQIPV"
     gene            2206..>2991
                     /locus_tag="RHX79_004618"
     CDS             2206..>2991
                     /locus_tag="RHX79_004618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000834167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1837 domain-containing protein"
                     /protein_id="HDV2199688.1"
                     /translation="MKSEDTNSLHKIYNPVYGLDNIVLLAQECQSTDPVKVNLLCLGF
                     KEDLPKDKELAETLFLELVHYCIPHPVIAKRKALSQTEGKDEARLYSELAREARSLFM
                     KYKLESTLTIKKGETQEKFEQRVKNANLRYGEVGELISYCIAIHFLKAAQLVSKMALK
                     TSSEMPVFGLDGIHATVDDEGTLTVFYLESKMTREFTSGSEQFSKSVSGFENDRKSRR
                     NEYRILQDLSNLESLEGEERKKAVQYFDPYSSESSNVRERFVGI"
BASE COUNT          931 a          640 c          697 g          723 t
ORIGIN      
        1 gtattatcaa tttttttatc aaagtgaaca gtagtgaata gtatgtatta aaggaaagtt
       61 gaagatcaga catgacgcat ttctctggct agccagaaca aggtcattgt tctgtcactg
      121 gcacaatccc cctcggtagt gcgcttgtat gggcaccggc acaattgaca cgacaataaa
      181 acactaccgg agaagtcatg actactgtta accagatccc tgatgcaaac attacaccct
      241 ccctcccacc gaaaattcgc gaagcggtgg ataaagttaa ggtagcaaaa gctgtctggc
      301 aggaagaacg gcgaaaacaa actgaagctg ctgcaatgat tgaaactatc cgtaaacgtc
      361 aggaagatac aaaaacggaa acgcaggcgc ttaatgatga atggcgaaac ctgtttcgtg
      421 agaatcaggg aaatatgacg ccacgcatga aaaaactgcg ggcagaaatc gccctcggac
      481 gcgaaacact ggatgagttc gaagatttgc tggcagctca ggcggcagaa aatgaattcc
      541 tgccctggaa aactgcggat gctgcaaacc actacatcag tgagcataat cgcctgattg
      601 aaactcatgc agtgtggctc tggaatgagt ttatgaagga acacggccag aaacttattc
      661 agatccttgg actgctgaaa atgactctgg gccgaagcgc ttctgctgtt atcggtgtag
      721 ttcataccgt aaacgacccc gaaagtgtgc tgaagcaatt tatcagcgag caactcacca
      781 ctccggcact gtcctgtaac gtatcttcaa cggatgatat taccctgccg gggatcagca
      841 tttatgcgga cgataaagcc atccaagatg ccagacaatc ccccagccct gcagcgcgtt
      901 cacggatgct taaacagcgt gacatggtta aagggggcga gaagaaatga atgccggaag
      961 cattactcag gaagcactca acgattaccg ctcggcgata aaaagctggc tgacactacg
     1021 taatacgcaa agtacctgcc agcttcgtct ggcggctctg ctggatactg aagaaaaacc
     1081 ggcagcatat gccagccagc ttgaggatct tcgtgagcgt cttgcagtcc tcgaatggca
     1141 gattaactgt gctgcacggg atggtcttta tgctcaccag attgtgctgg agagttgtgt
     1201 tacaagcgca acggaaaact tcatgagcga gcatggtgat gcactcactg acgctctggc
     1261 tccttttctt tgcgctccat acgggcttga ggcggcaatg aaaatattac gaaccgctgt
     1321 agcccgacaa acggaagtgc gtactccggt aatttcagca gcatacaaga gcattatcga
     1381 cgaaaccgga ttaacggtgg atgcatcaat gtgcgctgat gcttcagcca gtttcacccc
     1441 ggcacaacat aaagttttcc tggcccgcct taaccgactt aatgaaaaag gagggtactg
     1501 atatggccct gaagtgtcct gaatgtggga cggttgctca cgccagaacc agtgcctatg
     1561 aagctccatc ggttaaacgc tcatggtatc agtgccagaa tctggaatgt tcctgcacat
     1621 ttaccgctct ggaaagcgtg gatacgataa ttatgaagcc ttggcgcaat gaacgggaat
     1681 cagacaaagc acaaatgccg gaaaaacaac agcaaactct caaccgctat ggctccgcgt
     1741 caaagctgtc aagccgtcag caaattcctg tctgattagc aaaatacgcc cacgtagtcc
     1801 cggtccagta ccgggatttt ttacgccttt tccctggctg gcctgagagc gtatgagtgc
     1861 atatctatgg cgcatgaaaa cgcattagtc tcatgcgcca tttttgacgc gaaagccctt
     1921 gtgtggtggc ttctgagacg atttacgggg tgcatgaaaa ccagtctgtt aagcgaagca
     1981 ggcaggcggg cggggctgcg cgcgctgaga tacaaaagat aaccaattat caatgaggtc
     2041 atactcaata atttggttat cagccagtca catgcttaat gctacaactt gatagctcaa
     2101 tttttatcac gcatactgct ggcattatcc gtaatcagat aactcctaaa gaactgatta
     2161 gaacggcttc aaatcacaac tttagactga gaggttgaac aaggaatgaa atctgaagac
     2221 actaattcgt tacataaaat atacaatcca gtgtatggac ttgataatat cgtattactt
     2281 gcacaagagt gtcagtctac agatccagta aaagttaatc ttctttgctt aggattcaaa
     2341 gaagacttac ccaaagacaa agagcttgct gaaactttat ttttagaatt agttcattat
     2401 tgcattcccc atccagttat agcgaaaaga aaagccttaa gtcaaactga aggcaaagat
     2461 gaggcaaggc tttatagtga acttgcaaga gaagcacgta gtctttttat gaaatataaa
     2521 ttagaaagta cgttaactat aaaaaaaggt gaaactcagg agaagtttga acaacgagta
     2581 aagaatgcta atttacgtta tggtgaagtg ggtgagttaa tatcatattg tatagcaatc
     2641 cattttttaa aagcagcgca attagtctca aaaatggctc tcaaaacatc atctgaaatg
     2701 cctgtttttg gactggatgg aatacatgca accgtagatg acgagggaac attaacggtt
     2761 ttttatctag aatctaaaat gacaagagag ttcaccagtg gctctgaaca attttctaaa
     2821 tcagtaagtg gttttgaaaa cgatagaaag agccgtagaa atgaatatag aatactacaa
     2881 gatttgagca atttagagtc cctagaggga gaggagcgaa agaaagcagt acaatacttt
     2941 gatccttatt caagtgaatc atcaaatgtc agagagcgct tcgttggaat t
//
LOCUS       DAPGWB010000286         2880 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.291, whole genome shotgun sequence.
ACCESSION   DAPGWB010000286 DAPGWB010000000
VERSION     DAPGWB010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.291"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            296..1462
                     /gene="nhaA"
                     /locus_tag="RHX79_004619"
     CDS             296..1462
                     /gene="nhaA"
                     /locus_tag="RHX79_004619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDV2199689.1"
                     /translation="MKHLHRFFSSDASGGIILIIAAILAMMMANSGATSGWYHDFLET
                     PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI
                     GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA
                     IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTA
                     VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL
                     QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMAVGIL
                     CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV"
     gene            1528..2427
                     /gene="nhaR"
                     /locus_tag="RHX79_004620"
     CDS             1528..2427
                     /gene="nhaR"
                     /locus_tag="RHX79_004620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705976.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator NhaR"
                     /protein_id="HDV2199690.1"
                     /translation="MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEE
                     RLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADA
                     LSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGL
                     FSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEI
                     LGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERM
                     IQHPAVQRICNTDYSALFSPAAR"
     gene            complement(2466..>2880)
                     /locus_tag="RHX79_004621"
     CDS             complement(2466..>2880)
                     /locus_tag="RHX79_004621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000871680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial family protein"
                     /protein_id="HDV2199691.1"
                     /translation="FEDQSIDTGRFVLSRINNENYQFHHIRFDCIQGEQGELVFEPSD
                     VEYYFEPVTIQESGTSILKNELENSEDGAGQVGFQLSNDGTNEIQYGKSNYYSFQHPH
                     EGSNQIPLFIRPRTYGNNVSSGQIMSRVKIVVMYN"
BASE COUNT          688 a          638 c          717 g          837 t
ORIGIN      
        1 aagctggatt atttttgaaa tattgtccta acaaataacg ccgactgaca agaaattaat
       61 tattactttt cctaattaat ccctcagaaa tcctgacctt aagctatgat tatcagggct
      121 tagggtcacc cgttagcgct tacagccgtc aaaaactcat ctcaccgctg atggcgcaaa
      181 tcctttaatt gctcgtaaaa aacgagttat tcctacacta taatctgatt ttaacgatga
      241 ttcgtgcggg gtaaaatagt aaaaacgatc tattcacctg aaagagaaat aaaaagtgaa
      301 acatctgcat cgattcttta gcagtgatgc ctcgggaggc attattctta tcattgccgc
      361 tatcctggcg atgatgatgg ccaacagcgg cgcaaccagt ggatggtatc acgactttct
      421 ggagacgccg gttcagctcc gggttggttc actcgaaatc aacaaaaaca tgctgttatg
      481 gataaatgac gcgctgatgg cggtattttt cctgttagtc ggtctggaag ttaaacgtga
      541 actgatgcaa ggatcgctag ccagcttacg ccaggccgca tttccggtta tcgccgctat
      601 tggtgggatg attgttccgg cattactcta tctggccttt aactatgccg atccgattac
      661 ccgcgaaggg tgggcgatcc cggcggctac tgacattgcc tttgcacttg gtgtgctggc
      721 gctgttggga agtcgtgttc cgttagcgct gaagatcttt ttgatggctc tggctattat
      781 cgacgatctt ggggccatca ttatcatcgc attgttctac actaatgact tatcgatggc
      841 ctctcttggc gtcgcggctg tagcaattgc ggtactcgcg gtattgaatc tgtgtggtgt
      901 acgccgcacg ggcgtctata ttctggttgg cgtagtgttg tggactgcgg tgttgaaatc
      961 gggggttcac gcaaccctgg cgggggtaat tgtcggcttc tttattcctt tgaaagagaa
     1021 gcatgggcgt tctccagcga agcgactgga gcatgtgtta cacccgtggg tggcgtatct
     1081 gattttgccg ctgtttgcat ttgctaatgc tggcgtttca ctgcaaggtg tcacgctgga
     1141 tggcttgacc tccattctgc cattggggat catcgctggc ttgctgattg gcaaaccgct
     1201 ggggattagt ctgttctgct ggttggcgct gcgtttgaaa ctggcgcatc tgcctgaggg
     1261 aacgacttat cagcaaatta tggcggtggg gatcctgtgc ggtatcggtt ttactatgtc
     1321 tatctttatt gccagcctgg cctttggtag cgtagatcca gaactgatta actgggcgaa
     1381 actcggtatc ctggtcggtt ctatctcttc ggcggtaatt ggatacagct ggttacgcgt
     1441 tcgtttgcgt ccatcagttt gacaggacgg tttaccgggg agccataaac ggctcccttt
     1501 tcattgttat cagggagaga aatgagcatg tctcatatca attacaacca cttgtattac
     1561 ttctggcatg tctataaaga aggttccgtg gttggcgcag cggaggcgct ttatttaact
     1621 ccacaaacca ttaccggaca gattcgagcg ctggaagagc gcctgcaagg caaattattt
     1681 aaacgcaagg gacgtggtct cgaacccagc gagctgggag aactggtcta tcgctatgcc
     1741 gataaaatgt tcaccttaag ccaggaaatg ctggatattg tgaactatcg caaagaatcc
     1801 aatttattgt ttgacgttgg tgtggctgat gcactttcca aacgcctggt cagtagcgta
     1861 cttaacgccg cagtggtaga aggcgagccc attcatcttc gctgcttcga atccacccac
     1921 gaaatgctgc tggagcaatt aagtcagcat aaactggata tgatcatttc tgactgtccg
     1981 atagactcta cgcagcagga aggcctgttc tccgtgagaa ttggcgaatg tggcgtgagt
     2041 ttctggtgta caaatccacc accagaaaaa ccgttcccgg cttgtctgga agaacggcga
     2101 cttttgattc ctgggcgacg ttcaatgtta gggcgcaaat tgcttaactg gtttaactcc
     2161 cagggattaa acgtagaaat cctcggcgag tttgatgatg ccgcgttgat gaaagctttt
     2221 ggtgcgatgc acaatgcaat cttcgttgcc ccaacgcttt atgcatatga cttttatgcc
     2281 gataaaactg tcgtagaaat tggtcgcgtc gagaatgtga tggaagagta ccatgctatt
     2341 tttgctgagc ggatgattca gcacccggcg gtacagcgaa tctgcaatac ggattattct
     2401 gcgcttttta gtccagcggc gcgttaatcg gcacctcccc ccaaagttaa ggtgggggag
     2461 atagattagt tgtacataac cacgattttg actcggctca ttatttgccc gcttgagaca
     2521 ttatttccat atgtacgcgg gcgaataaat agaggaatct gattacttcc ttcatgggga
     2581 tgctgaaaag agtagtaatt gcttttacca tactggattt cattcgtacc atcattggag
     2641 agttgaaagc ctacttgacc cgcaccgtcc tcactgtttt ctaactcatt ttttaatatg
     2701 ctggttcctg actcctgtat cgtcactggt tcaaagtaat attcaacatc actgggttca
     2761 aaaactaatt caccttgctc gccctggatg cagtcaaatc ttatatgatg aaactgataa
     2821 ttttcattat tgatacgaga cagtacaaat cgtccagtgt cgatggattg atcttcaaaa
//
LOCUS       DAPGWB010000287         2854 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.292, whole genome shotgun sequence.
ACCESSION   DAPGWB010000287 DAPGWB010000000
VERSION     DAPGWB010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2854
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.292"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(451..1428)
                     /gene="wzzB"
                     /locus_tag="RHX79_004622"
     CDS             complement(451..1428)
                     /gene="wzzB"
                     /locus_tag="RHX79_004622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310855.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HDV2199692.1"
                     /translation="MRVENNNVSGQNLDPEQIDLIDLLVQLWRGKMTIIISVIVAIAL
                     AIGYLVVAKEKWTSTAIVTQPDVGQIAGYNNAINVIYGSAAPKVSEIQSILIGRFSTT
                     FSALAETLDNQEEPEKLTIEPTVKNQSLPLAVSYVGQSPEAAQKQLAQYIQQVDDQVN
                     EELEKDLKDNIALRMKNLQDSLKTQEVVAQEQKELRIRQIQEALQYANQAQVTKPQIQ
                     QTQDVTQDTMFLLGSDALESMVKHEASRPLVFSSTYYQTRQNLLDIESLKVDDLDIHA
                     YRYVMKPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK"
     gene            complement(1574..2740)
                     /gene="ugd"
                     /locus_tag="RHX79_004623"
     CDS             complement(1574..2740)
                     /gene="ugd"
                     /locus_tag="RHX79_004623"
                     /EC_number="1.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HDV2199693.1"
                     /translation="MKITISGTGYVGLSNGLLIAQNHEVVALDILQSRVAMLNDRISP
                     IVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIATPTDYDPKTNYFNTSSVESVIK
                     DVIEINPYTVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVI
                     GERSERAERFAALLQEGAIKQNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYA
                     ESLGLNSRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAI
                     VDANRTRKDFIADAILSRKPQVVGIYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVII
                     YEPVMKEDSFFNSRLERDLTTFKQQADVIISNRMAEELKDVADKVYTRDLFGSD"
BASE COUNT          790 a          629 c          616 g          819 t
ORIGIN      
        1 aattataatc aattgatata taagtaaaaa tgaagaaagg catgacattt ttttgcctgg
       61 ttgctaaata atctgctgat aaaaaaaaca gacttgtaca aaattacgcc atgttcgctg
      121 tgagtaatcc cgttttgcga aggtacatac taaccaaaga ggtgtctgat ttgatgcatc
      181 acctgctggt gctgttgcag gttcaaatgc tggatttaac aacagtgata gtgattctgc
      241 gcacgcggca tcagtgagtt gcggggtagg cggatgtgat gttgctgtca cttccggtaa
      301 caactcatcc gtcattgccc ggtgtgcagg tttatcgtgc ctacaaattt tctcaacata
      361 tgtaagctgg ataagatacg ccggcatcgc atccgacaaa aaaaacgggc acggtgtgac
      421 caccctgccc gctttcttta agctcaaaaa tcacttcgcg ttgtaattac gcagcgcgtt
      481 acgccccagt acaatacccg cgccaaccat gccgcccagc agcaccgcca gaatcaaggt
      541 gattgccttc ttagggctat cacgacgaat gggtaacgta ggtttcatca catagcggta
      601 agcgtgaata tcaagatcat caacctttaa gctttcgata tccagcaggt tttgacgagt
      661 ctgatagtag gttgacgaga acaccaacgg acggctcgct tcgtgcttta ccatcgactc
      721 cagtgcatca ctacccaaaa ggaacatggt atcctgggtc acgtcctgtg tctgctgaat
      781 ctgcggcttt gtcacctgcg cctgattcgc atactgcaac gcttcctgaa tttgacgaat
      841 acgcagctct ttttgctcct gagcgaccac ttcctgggtc ttcagagaat cctgcaagtt
      901 tttcatacgc agcgcgatgt tgtctttcag atctttttca agttcttcat ttacctggtc
      961 gtcaacttgc tggatatatt gagccagctg tttctgcgca gcttcaggcg attgtccaac
     1021 ataagacacc gctaaaggta atgactgatt tttaacagta ggttcaatgg tcagtttttc
     1081 aggttcttcc tgattatcaa gcgtttctgc taatgcagaa aatgtcgtgc tgaagcgacc
     1141 aattaaaatc gactggatct cagacacttt cggcgcggct gaaccataaa tcacatttat
     1201 ggcattgtta taaccagcga tttgccccac atcaggttga gtaacgatag ctgtggaagt
     1261 ccatttttct ttggcaacga ccagatatcc tattgccagg gcaatagcga caatgacaga
     1321 gatgatgatt gtcatcttgc cacgccatag ttgcaccagt aaatcaatca aatcaatctg
     1381 ttccgggtca aggttttgcc cagaaacatt attattttct actctcatca ttaccctaac
     1441 ggacgttata attttaggtc tgcatagtgt agtgataatc ttagtgaata ctataggata
     1501 aatgataaaa acaatgaatt attgcacagg ttacaaaaga caatcagggc gaaaccgccc
     1561 tgatcagaga agattagtcg ctgccaaaga gatctcgtgt gtagactttg tctgccacat
     1621 ccttaagctc ttctgccata cggttggaga taataacgtc ggcttgttgt ttgaaggtcg
     1681 tgagatcacg ttccaggcga gagttgaaga atgagtcttc tttcatcacc ggctcgtaaa
     1741 tgataacttc aacgcctttc gccttgatac gtttcataat cccctgaatg gaagacgcac
     1801 ggaagttatc tgaaccgctc ttcataatca gacgataaat acccaccact tgcggcttgc
     1861 gtgacaaaat ggcatcggca ataaaatctt tacgcgtgcg gttagcgtct acgattgccg
     1921 agatcaggtt attcggcaca gactggtagt tcgccagtaa ctgcttggta tctttcggca
     1981 gacaataacc accataacca aacgacggat tgttgtaatg gttgccaatt cgtgggtcga
     2041 gacaaacgcc ttcgattatt tgacgggaat tcagacctaa actttctgcg tagctatcca
     2101 gttcgttaaa gtacgccacg cgcatcgcca ggtaggtgtt tgcaaaaagt ttaatcgctt
     2161 ctgcttcagt ggagtcggta aacagggtcg ggatattttg cttaatcgct ccttcctgta
     2221 acaacgcagc aaaacgttct gcgcgttctg aacgctcacc gatgacaata cgtgacggat
     2281 ggagattatc gtaaagtgct ttaccttcgc ggaggaattc cggagagaaa ataatatttt
     2341 cagtacgata tttcttatgc atcgctgcgg taaaaccaac gggaaccgtt gatttgatga
     2401 ccataaccgt ataaggattt atctcaatta cgtctttaat tactgattct acactggatg
     2461 tattgaaata attagtttta ggatcatagt cggttggagt ggcgatgatg acataatcag
     2521 catcccggta ggcttcattt ttatctaatg tggcattaaa gtgtatttta tctgattgca
     2581 aaaactgctg aatttcctta tcaacaatag gagatatccg atcattcagc atagcaacgc
     2641 gtgactgtaa aatatctaat gccacaacct catgattttg tgcgattaga agcccgtttg
     2701 acaagcctac atagccagta ccggaaatgg tgattttcat ttcatgctct cagaattaac
     2761 ttaactgtga atcatgatgt ttttagcatc ctgataagag ctaaaagttt taacgctacg
     2821 ttgttcgatg gtcaacgcaa cgaaaaacaa ttca
//
LOCUS       DAPGWB010000288         2841 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.293, whole genome shotgun sequence.
ACCESSION   DAPGWB010000288 DAPGWB010000000
VERSION     DAPGWB010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.293"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            74..706
                     /gene="comR"
                     /locus_tag="RHX79_004624"
     CDS             74..706
                     /gene="comR"
                     /locus_tag="RHX79_004624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family copper-responsive transcriptional
                     repressor ComR"
                     /protein_id="HDV2199694.1"
                     /translation="MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLAD
                     LVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFA
                     AIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGE
                     IPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK"
     gene            complement(768..1307)
                     /locus_tag="RHX79_004625"
     CDS             complement(768..1307)
                     /locus_tag="RHX79_004625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDV2199695.1"
                     /translation="MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIK
                     ETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGA
                     LGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRD
                     PGTQIPLDSNGQLILNNKV"
     gene            complement(1517..2821)
                     /gene="ndh"
                     /locus_tag="RHX79_004626"
     CDS             complement(1517..2821)
                     /gene="ndh"
                     /locus_tag="RHX79_004626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017384716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone dehydrogenase"
                     /protein_id="HDV2199696.1"
                     /translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS
                     HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDE
                     KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDSPHQARRFHQEMLNLFLK
                     YSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGE
                     RILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGI
                     KAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAA
                     HQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI
                     ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH"
BASE COUNT          680 a          779 c          701 g          681 t
ORIGIN      
        1 atctggactg gtgaacggag gtgattattt ttataataac ctttcattca cagtcaccag
       61 gtacaacggc atcatggcaa ctgactcaac acaatgtgta aaaaaaagcc gtggccgccc
      121 aaaagtgttc gacagggatg ccgcgcttga taaggccatg aaattgttct ggcaacacgg
      181 ttatgaagcg acttctcttg cggacctcgt cgaagcgacc ggagccaaag cgcccacgct
      241 atacgcggaa tttaccaaca aagaggggtt atttcgtgcc gttctcgacc gctatatcga
      301 tcgttttgcc gctaagcatg aagcacagct gttttgtgaa gagaaaagcg tggagtctgc
      361 gctggctgac tattttgctg ccatcgccaa ctgctttacc agcaaagaca ccccggcagg
      421 ctgcttcatg atcaacaact gcaccaccct ctccccagat tcaggagata tcgccaatac
      481 gttgaaatca cgccatgcga tgcaagagcg cactttgcag cagtttttat gtcaacgaca
      541 agcgcgcggg gaaatcccga cccactgtga cgtgacacat ctggcagaat tccttaattg
      601 tattattcag gggatgtcga tcagcgcacg cgaaggtgca tcgctggaaa aactaatgca
      661 gattgccgga acgactttgc gtttatggcc cgaactggtg aaataagtcg caaaaaaagc
      721 ccctcagcct gagcgaatga ggggccaaat tgcagagtac agccttgtta tactttgtta
      781 ttcaaaatca gttgcccatt actatctagc gggatctgcg tacccggatc gcggtccatg
      841 cggattttgc cctgctgatc gccaatctta taggtcacat cataaccgag cattttttct
      901 gacttgtcat acaccgtttt acaacgctgt tgcgtagtcg tgtaagtatc gctttcctgg
      961 agagaaccct ggatctggtt accggcatat ccaccaccca gcgcccccac aacagtggcg
     1021 acatctttac cgcgaccacc gccaaactga tgccctatca cgccgccagc aacagcgccg
     1081 agcaccgacc cggtaatgcg attttcatcc tgcaccggtc gacgatgggt cactgtgacg
     1141 ttgcgacact cctgacgcgg tgttttaacc gtttccttga ttggggttgc agaaacaacc
     1201 tgagcgtatt gcgggccccg ttcaaacacg ttcagactgg ccactgccgc tacgcccagc
     1261 gcagctgcga caccaatccc gatacccgcc aacattgatt tattcacggg aacacctcct
     1321 tctttgcagt tatgccaatc atgcaagcga aggagaaaag cagctatcag acagaagatg
     1381 aaaagcgcgg gaatggctgg aaatacttaa ggattcggag gagtctgaag gaatgcctga
     1441 tgcgacgcgg ctgccgatcg cgctgttcct caagggcgga taaggcgttt atgccacatc
     1501 cgccagtgta cgtcgattaa tgcaacttca aacgcggacg gataacgcgg ttaatactcc
     1561 ccaccagcat cattaatccg gttttaaagt aaccatgcag cgcaatctga tgcattcggt
     1621 atagcgagat atatacaaag cgcgcaattc gtccttcaat catcattgag ccgcgcgtca
     1681 ggttacccat caggctaccg acggtggaga agttcgacag cgataccagc gaaccatgat
     1741 ctttatactg ataatttttc agcggcttac cgttcatctg cgccagtatg ttgttcattg
     1801 cgcaagtcgc catctggtgt gcagcctgag cacgcggcgg aacaaagccc ccttccggac
     1861 gcgggcatga cgcgcagtcg ccaatagcgt aaatgtctgg atcgcgggtg gtttgcagcg
     1921 tcggttccac caccagctgg ttgatacggt tagtttcaag accaccgata tctttcagga
     1981 agtctggcgc tttgatcccg gctgcccaca ccatcagatc agcctcaata tattcgccat
     2041 ctttagtgtg caggccgcct tcatcagcac tggtgaccat ggtttgcgtc agcacgcgaa
     2101 cgccaagttt cgttagctcg ttgtgggccg cagcagagat acgtggcggt aatgcaggca
     2161 aaatacgttc tcccgcttct accagcgtta cgttcagggc ttcgttggtc aggcctttgt
     2221 aaccgtagct gtgcagttgc ttgaccgcgt tgtgcaattc agcggagagt tctacacccg
     2281 tcgcgccgcc gccgacaatc gcaatgttca ctttgccatt tgcgcccagg ttggcggagt
     2341 atttcaggaa gagattcagc atctcctggt gaaagcgacg cgcctggtgc gggctatcga
     2401 ggaaaatgca gttctctttg acacctggcg tattgaaatc gttagaggtg ctacccagcg
     2461 ccattaccag ggtgtcatag gcgattttac gttccggaac cagcagttca cctttctcat
     2521 cgcgcagttc tgcaatagtg attgttttcg cttcacgatc aatatcaatg acggaaccca
     2581 gctggaactg gaaaccatga ttgcgcgcat gggccagata gctcaacgca tcgacgcctt
     2641 catcaagcga gccagtcgcc acttcgtgca gcagcggttt ccacaggtgg ctgtggttac
     2701 gatcgaccag cgtaattttg gcttttttct tacgtcccag cttatgcccc agctgtgttg
     2761 ccatttccag cccaccagca ccgccgccga caatcacaat ctttttcaat ggcgtagtca
     2821 acgtgacccc cttaaattta t
//
LOCUS       DAPGWB010000289         2808 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.294, whole genome shotgun sequence.
ACCESSION   DAPGWB010000289 DAPGWB010000000
VERSION     DAPGWB010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2808)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2808)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2808
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.294"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            100..2379
                     /gene="ydeP"
                     /locus_tag="RHX79_004627"
     CDS             100..2379
                     /gene="ydeP"
                     /locus_tag="RHX79_004627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance putative oxidoreductase YdeP"
                     /protein_id="HDV2199697.1"
                     /translation="MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKP
                     EGFDCPGCAWPDPKHSASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHE
                     LEATGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
                     FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHN
                     PGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYY
                     NVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEW
                     KDIERISGLSQTQIAELADAYAAAERTIICYGMGITQHEHGTQNVQQLVNLLLMKGNI
                     GKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGKRYGFTPPHAPGHAAIASMQA
                     ICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILP
                     VLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQATLPQS
                     VVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANF
                     ITCKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAK
                     ICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHD
                     PLSGIPGYKSIPVELEPSN"
     gene            2627..>2808
                     /gene="safA"
                     /locus_tag="RHX79_004628"
     CDS             2627..>2808
                     /gene="safA"
                     /locus_tag="RHX79_004628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system connector SafA"
                     /protein_id="HDV2199698.1"
                     /translation="MHATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLG
                     ISEMGRIARDLTHFII"
BASE COUNT          743 a          651 c          681 g          733 t
ORIGIN      
        1 ctactcttat atatccatgt tggcgataat ccctttgtat atactgtgca tcatcgctat
       61 tacaaatcct aataattcat ttccacacag gataagtaga tgaagaaaaa aattgaatcc
      121 taccagggtg ctgccggtgg ttggggtgct gttaaatccg tagcgaatgc agtacgtaag
      181 cagatggata tacgccagga tgttattgcc atgtttgaca tgaataagcc agagggcttt
      241 gactgtccgg gttgtgcatg gccagatcct aagcacagtg cgtcattcga catttgtgaa
      301 aacggcgcaa aagcaatcgc ctgggaagtc acggataagc aggtaaatgc ctctttcttt
      361 gctgagaata cggttcaatc attacttacc tggggagatc acgagcttga ggctacggga
      421 cgtctcactc agcctttgaa atatgatgct gtcagcgact gttacaagcc attaagctgg
      481 caacaagctt tcgacgaaat tggcgcacgc cttcaaagct atagtgatcc caatcaggtt
      541 gaattctata cttcgggccg cacttccaat gaagctgcct ttctttatca gctttttgcc
      601 cgtgaatacg ggagcaataa ctttcccgac tgctccaaca tgtgccatga accgaccagt
      661 gtgggtttgg cagcgagtat cggtgtgggt aaagggactg tgttgctgga agactttgag
      721 aagtgcgatt tagtcatttg cattgggcat aaccctggta caaaccaccc ccgcatgctg
      781 acttcgttgc gcgctttagt gaaacgggga gcgaaaatga tcgccatcaa tcctctacag
      841 gaacgtggcc tggagcgatt taccgcaccg caaaacccgt ttgaaatgct gacgaactct
      901 gagactcagt tggctagtgc ctactataac gtgcgcattg gtggcgatat ggcgttgctc
      961 aaggggatga tgcgcctgtt aattgagcgc gatgatgctg caagtgccgc aggtcggccc
     1021 tcattgctgg atgacgaatt tattcaaacg cataccgtcg gctttgacga gctacgccgt
     1081 gacgttctca attccgagtg gaaagatatc gaacgtattt ctggattaag tcagactcaa
     1141 atcgccgaac tggctgatgc atatgccgct gccgaacgaa ccattatctg ttacggaatg
     1201 gggatcactc agcacgaaca tggtacccag aatgtacagc aactggtcaa tctgctgttg
     1261 atgaaaggta acattggcaa gcctggtgcg ggtatctgcc cactacgtgg tcactctaat
     1321 gtacagggcg accgaaccgt cggtatcacc gagaaaccgt ctgcagagtt tctggctcgc
     1381 ctgggtaagc gctatggctt caccccacct catgcacctg gacatgctgc aattgccagc
     1441 atgcaagcaa tatgtacggg gcaggctcga gcattgatct gcatgggggg caattttgcg
     1501 ctggcaatgc cagatcggga agcgagcgct gtaccgttaa cgcaattaga tttggcggta
     1561 cacgtagcca ctaagcttaa ccgctctcat ctgctgaccg cacggcatag ctatattctg
     1621 ccggttctgg ggcgtagcga gattgatatg caaaaaagcg gtgcgcaggc ggtaaccgtt
     1681 gaggattcaa tgtcgatgat tcatgcctcg cgtggcgtgt taaaacccgc cggtgtaatg
     1741 ctgaaatcag agtgtgctgt ggtcgcggga atcgcccagg caacactacc ccagagcgtg
     1801 gtagcctggg agtatctggt ggaagattat gatcgcattc gcaatgacat tgaagctgtg
     1861 ctgccagagt tcgccgacta taaccagcgc atccgtcatc ctggaggttt tcacctgata
     1921 aatgcagctg ctgaaaggcg ctggatgacg ccgtcaggta aggctaattt cattacctgc
     1981 aaagggctgt tagaagatcc ctcttcagcg tttaacagta agctggtcat ggcgacagta
     2041 cgcagccacg atcagtacaa cacgacgatt tatggtatgg atgatcgcta tcgaggggta
     2101 ttcggtcaac gagatgtggt ctttatgagt gctaaacaag ctaaaatttg ccgtgtaaaa
     2161 aacggcgaaa gagttaatct tattgcgctt acgccagacg gtaagcgcag ctcacgccgc
     2221 atggatagat taaaagtggt catttaccct atggctgacc gctcactggt gacctatttt
     2281 ccagaatcga atcacatgct aactcttgat aaccacgatc cattaagtgg cattcctggt
     2341 tataaaagta ttccggttga attagaacca tcaaattaat tcgcctcctc atttcttctg
     2401 ctgtcatccg cacagcagaa gaatttctca ttgactatta tcgcgcaatt tgctcacatt
     2461 gattaaatta aaccacacac tataagatat aaacctctgc ctacagctgt aagaaactcc
     2521 gctcagtact gaagtgccag tcctatttcc tcttttctcc agcctgttat attaagcata
     2581 ctgattaacg atttttaacg ttatccgcta aataaacata tttgaaatgc atgcgaccac
     2641 agtgaaaaac aaaatcacgc aaagagacaa ctataaagaa atcatgtctg taattgtggt
     2701 tgtcttatta ctgaccctta cgttgatagc cattttttcg gcaattgatc agctgggtat
     2761 ttcagaaatg ggtcgcattg caagagatct tacacatttc attatcaa
//
LOCUS       DAPGWB010000290         2782 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.295, whole genome shotgun sequence.
ACCESSION   DAPGWB010000290 DAPGWB010000000
VERSION     DAPGWB010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.295"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            39..2249
                     /locus_tag="RHX79_004629"
     CDS             39..2249
                     /locus_tag="RHX79_004629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001488783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HDV2199699.1"
                     /translation="MTCTDISVEPSGYIGFVRIYISAKGYPSVASSAGDNLISGYIVR
                     SEVSTKRYSGLFVGSDTKSLYSYIYSQSSGPQWIRHTRRDELSRFGQNESTTRMYGPT
                     GDRFFEIHTNGSWGVYDSSSGQWSPLGLAQGGTGGRTIEQARANLRVMYEQKAGLANT
                     DLNTLTGEYSGFYQQPTSAYATEELNYPIGLAGALIVLQTRANTASSCVQVYYPYNNP
                     GITYRRIYEGGSGTWSEWKRDVSTERVEEGKETTYVYSTYSSGAPRLQVSKSGLWGCH
                     NGTGWLPLAVGQGGTGATTVEDARNNLSLGESSAVKFKNLTLTEALDATLGLLTKTGR
                     DWNTQHTDNINKFIPIAGSTNGPAGSMVLGGIHVQFSKNYAVQFGGRNSGFWGRTIEN
                     GTTQEWKKLLTVDDLNSSTDLAVRSLTTSNPVKSGGGRIDVLGSTSDYSKMDCFVRGF
                     DSTGNSLVWALGSSVGVSKMLSLKNFFSGAEILLNGNDGAVQLKTGAVNGATAQTLTI
                     NKNEVNSTVDLTLTKQSGTGNRFVLQNSGNAELPFSVRVWGSSTRQNVFEVGTSAAYL
                     FYAQKTSAGQLFDVNGAINCTTLNQSSDRDLKDDILVISDATKAIRKMNGYTYTLKEN
                     GMPYAGVIAQEVMEAIPEAVGSFTHYGEELQGPTVDGNELREETRYLNVDYSAVTGLL
                     VQVARETDDRVTALEEENTTLRQNLATAGTRISTLENQVSELVALVRQLTGSEH"
     gene            2301..2420
                     /locus_tag="RHX79_004630"
                     /pseudo
     CDS             2301..2420
                     /locus_tag="RHX79_004630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001374808.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
BASE COUNT          790 a          571 c          680 g          741 t
ORIGIN      
        1 taattgttgg tgataatatc ggtcttggtg aagttgccat gacctgcact gatatctctg
       61 ttgagccatc aggttatatt ggatttgtca ggatttacat ctcagcgaaa ggttatccat
      121 cagtagcgtc tagtgccggg gataatctta tttctggtta tatagttaga tcagaagtgt
      181 caacaaaaag atattccggt ctatttgttg gttcagatac aaaatcattg tattcgtaca
      241 tttacagcca aagttctggc ccgcaatgga tacgtcatac ccgcagagat gaattaagcc
      301 gctttggtca aaatgaatca acaactcgta tgtatggtcc aactggtgat cgtttctttg
      361 aaatccatac taacgggagt tggggggttt atgattcttc ttctggacaa tggtctccgt
      421 taggtttagc ccagggcggt actggtggaa gaactatcga gcaagcacgt gcgaacttgc
      481 gggtaatgta tgagcaaaaa gctggccttg ctaatactga cctaaacacc cttaccggtg
      541 aatattctgg tttctatcaa caaccaacga gcgcttacgc aacagaagaa ttaaattacc
      601 caatcggtct ggcgggcgct ttaatagtgc tccaaacgag agccaacact gcttcttcct
      661 gcgttcaggt gtactaccct tataataatc cgggaattac ttatagacga atatatgaag
      721 gaggtagcgg tacctggtct gaatggaaga gagatgtatc aacagaaagg gttgaagagg
      781 gaaaagaaac aacttacgta tattctacgt attcttcagg cgcaccacgc ttacaggttt
      841 ccaaatctgg tttgtggggt tgtcataatg gcactggctg gttgccatta gctgttgggc
      901 aaggaggtac aggtgcgaca acagtagaag atgcgcgaaa caacttaagt cttggcgaaa
      961 gtagcgcagt taaatttaaa aaccttactt taaccgaagc gctcgacgcg acattaggac
     1021 tgcttacaaa aacaggacga gactggaaca cgcagcatac tgataacatt aataaattta
     1081 taccaattgc aggcagtaca aacggcccgg caggttctat ggttcttggc ggcattcatg
     1141 ttcaatttag taaaaattat gctgtgcagt tcggaggccg caattccggt ttttggggaa
     1201 gaacaattga aaatggaacg acgcaggaat ggaagaaatt actaacagta gacgatctca
     1261 attcatctac cgatcttgct gtcaggtcat taaccacatc taacccggta aaatctggcg
     1321 gagggcgaat tgatgtcctt ggaagcacgt cagactatag caaaatggat tgctttgtac
     1381 gtgggtttga tagcaccggt aattctctcg tgtgggcgtt gggttcatca gtcggcgtaa
     1441 gtaagatgct atcgctaaaa aatttcttta gcggagctga gatactgtta aatggtaatg
     1501 acggcgcggt tcaactcaaa acaggtgctg ttaacggggc tacagcgcag acgctcacta
     1561 tcaacaagaa tgaggttaac tcaaccgttg atttaaccct tacaaagcaa tcagggactg
     1621 gtaatcgttt tgttttacag aactcaggta atgcagaact accgttttct gtcagggtgt
     1681 ggggttccag tactcgacaa aacgtttttg aggttggaac gtctgctgcg tatctgtttt
     1741 atgcgcaaaa aacgtcagca ggccagttgt ttgatgtaaa tggcgctatt aattgcacaa
     1801 cgctgaatca gtcatcagac cgcgacctta aagacgatat tctcgttatc agcgacgcga
     1861 cgaaagcaat ccgtaaaatg aacggataca cctacacgct caaggaaaac gggatgcctt
     1921 atgctggcgt tattgcacag gaagtaatgg aggcgatacc agaagctgtg ggatcgttta
     1981 ctcattatgg tgaagagttg caaggtccga ccgttgacgg caacgagcta cgcgaagaaa
     2041 ctcgctatct taatgttgac tactccgccg tgacgggttt acttgttcag gtcgcccgtg
     2101 aaacagatga tcgcgttacc gcgctggaag aggaaaacac aacgctacgt caaaatctgg
     2161 caacagcagg cacccggatc agcactctgg aaaatcaggt aagcgaactg gttgcacttg
     2221 tccggcagtt aacaggaagc gaacattgat atccttcaag ccctgaagga ggctgttcct
     2281 ggtacgttca gactcttgct gagctggaga tcgcaacgga ggaagagaaa gcgtttctgg
     2341 ccgcatggaa aacatatcgg gtattgctga accgtgttga tacagtaaac cccgtctggc
     2401 ctccaccttc gaagcgatag cccagcaact cctaaatagc tgcgcataat accgctacac
     2461 ctgccgtttt actgacattt ggaatattgc gtgagggcaa catatcgagg ggcagataca
     2521 gctcggtcaa atagaaaaac agccccacta tttaccatgc aatagctggt caaaaggaga
     2581 gcactattcc gctccgcgta gtattttgtg tttatagtga taacttaggt aatgcttagt
     2641 cactaagata ctttgctatt ggagagcgat ttataatgtg ggcgcaacag atttttacta
     2701 ttgcgccact tgctcttgtg agtactattc gctataagtt aatgttggtt ttgaaagtct
     2761 tttggatatt gtttttccga ta
//
LOCUS       DAPGWB010000291         2644 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.296, whole genome shotgun sequence.
ACCESSION   DAPGWB010000291 DAPGWB010000000
VERSION     DAPGWB010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2644
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.296"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..2491
                     /locus_tag="RHX79_004631"
     CDS             <1..2491
                     /locus_tag="RHX79_004631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HDV2199700.1"
                     /translation="IGQHCDQSVPDGFGGTEPRITCNAYLTTQRKAWDVLSDFCSAMR
                     CMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSALKDRHNAVEVNWID
                     PNNGWETATELVEDTQAIARYGRNVTKMDAFGCTSRGQAHRAGLWLIKTELLETQTVD
                     FSVGAEGLRHVPGDVIEICDDDYAGISIGGRVLAVNSQTRTLTLDREITLPSSGTTLI
                     SLVDGSGNPISVEVQSVTDGVKVKVSRVPDGVAGYSVWGLKLPTLRQRLFRCVSIREN
                     DDGTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQV
                     LARWDTPKVVKGVSFMLRLTVAADDGSERLVSTARTTETTYRFTQLALGRYTLTVRAV
                     NAWGQQGDPASVSFRIAAPAAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSETRI
                     TDIRQVETTARYLGTGLYWIAASINIKPGHDYYFYIRSVNTVGKSAFVEAVGRASDDA
                     EGYLDFFKGQITESHLGKELLEKVELTEDNASRLEEFSKEWKDASDKWNAMWGVKIEQ
                     TEDGKHYVAGLGLSMEDTEEGKLSQFLVAANRIAFIDPANGNETPMFVAQGNQIFMND
                     VFLKRLTAPTITSGGNPPAFSLTPDGKLTAKNADISGNVNANSGTLNNVTINENCQIK
                     GKLSANQIEGDIVKTVSKSFPRTNSYASGTITVRISDDQKFDRQVMIPPVLFRGGKHE
                     NFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDAQGVFSSVIDMPAGQGTLTLTFTVS
                     SSGANNWTPTTSISDLLVVVMKKSTAGISIS"
     gene            2558..>2644
                     /locus_tag="RHX79_004632"
     CDS             2558..>2644
                     /locus_tag="RHX79_004632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HDV2199701.1"
                     /translation="MRKVCAAILSAAICLVVSGAPAWASEHQS"
BASE COUNT          630 a          660 c          812 g          542 t
ORIGIN      
        1 catcggccag cattgcgatc agtcggtgcc ggacggtttt ggcggcacgg agccgcgcat
       61 cacctgtaat gcgtacttga ccacacagcg caaggcgtgg gatgtgctca gtgatttctg
      121 ctctgcgatg cgctgtatgc cggtatggaa cgggcagacg ctgacgttcg tgcaggaccg
      181 accgtcggat aaggtgtgga cctataaccg cagtaatgtg gtgatgccgg atgatggtgc
      241 gccgttccgc tacagcttca gcgccctgaa ggatcgccat aatgccgttg aggtgaactg
      301 gattgacccg aacaacggct gggagacggc gacagagctt gttgaagata cgcaggccat
      361 tgcccgttac ggtcgtaacg tcacgaagat ggatgccttt ggctgtacca gccgggggca
      421 ggcgcaccgc gccgggctgt ggctgattaa aacggaactg ctggaaacgc agaccgtgga
      481 cttcagcgtg ggtgcggaag ggcttcgcca tgtaccgggg gatgtcattg aaatctgcga
      541 tgatgactat gcgggtatca gcatcggcgg gcgcgtgctg gcggtgaaca gccagacccg
      601 gacgctgacg ctcgaccgtg aaatcacgct gccatcctcc ggtaccacgc tgataagcct
      661 ggttgacgga agtggcaatc cgatcagcgt ggaggttcag tccgtcaccg acggcgtgaa
      721 ggtgaaagtg agccgtgttc ctgacggcgt tgccggatac agcgtgtggg ggctgaagct
      781 gccgacgttg cgccagcgcc tgttccgctg tgtgagtatc cgtgagaacg atgacggcac
      841 gtatgccatc actgccgtgc agcatgtacc ggagaaagaa gccatcgtgg ataacggggc
      901 gcactttgac ggcgaccaga gcggaacggt aaacggtgtc acgccgccag cagtgcagca
      961 cctgaccgca gaagtcaccg cagacagcgg tgaataccag gtgctggcgc gctgggacac
     1021 gccgaaggtg gtgaagggtg tgagctttat gcttcgcctg accgtggcag cggatgacgg
     1081 cagtgagcgg ctggtcagca cggcccggac gacggaaacc acataccgct tcacgcagct
     1141 ggcgctgggg cggtacacgc tgacagtccg ggcggtaaat gcgtggggac agcagggcga
     1201 tccggcgtcg gtatcgttcc ggattgccgc accggcagcg ccgtcgcgga ttgagctgac
     1261 gccgggctat tttcagataa ccgccacgcc gcatcttgcg gtttacgatc cgacggtaca
     1321 gtttgagttc tggttctcgg aaacgcggat taccgatatc aggcaggttg aaaccacagc
     1381 ccgctacctt ggcacggggc tgtactggat agccgccagt atcaatatca aaccgggcca
     1441 tgattattac ttttatatcc gcagtgtgaa caccgtaggc aaatcggcat ttgtggaggc
     1501 cgtcggtcgg gcgagcgatg atgcggaagg ttacctggat tttttcaaag ggcagataac
     1561 cgaatcccat ctcggcaagg agctgctgga aaaagtcgag ctgacggagg ataacgccag
     1621 cagactggag gagttttcga aagagtggaa ggacgccagt gataaatgga atgccatgtg
     1681 gggcgtcaaa attgagcaga ccgaagacgg taagcattat gtcgcggggc ttggcctcag
     1741 catggaggat acagaggaag gcaaactgag ccagtttctg gttgccgcta accgtatcgc
     1801 gtttattgac ccggcaaacg ggaatgaaac gccgatgttt gtggcgcagg gcaatcagat
     1861 attcatgaac gacgtgttcc tgaagcgcct gacggctccc accattacca gcggtggaaa
     1921 tccgccggca ttttccctga caccagacgg aaagctgacc gctaaaaatg cggatatcag
     1981 cggtaatgtg aatgcaaatt cagggacgct caacaatgtc acgattaatg agaactgtca
     2041 gattaagggg aaactgtcag ccaaccagat tgaaggcgat attgtcaaaa cggtcagcaa
     2101 gtctttcccc cgcacgaaca gttatgccag tggcaccatc acggtaagaa tcagtgatga
     2161 tcagaaattt gaccggcagg tcatgatacc gccagtgtta ttccgcggtg gtaagcatga
     2221 gaatttcaac agtaataacc aacagtcata ctggtattca acctgccggt taagagtgac
     2281 ccgcaatggt caggagattt ttaatcagtc cacgacggat gctcagggcg tattttcctc
     2341 cgttatagat atgcctgccg gacaggggac gctgacactg acattcaccg tatcttcatc
     2401 aggagcgaat aactggacac caacaaccag tatcagcgat ctgctggttg tggtgatgaa
     2461 aaaatccaca gcaggtatca gtatcagctg aattttataa cccagaacgg gcgtcagaaa
     2521 tgacgccttt tttattgcag aaaagcgaga ggtaattatg cgtaaagttt gtgcagccat
     2581 tttgtccgca gccatctgtc tggtcgtatc cggtgcgcct gcatgggcgt ctgaacatca
     2641 gtcc
//
LOCUS       DAPGWB010000292         2626 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.297, whole genome shotgun sequence.
ACCESSION   DAPGWB010000292 DAPGWB010000000
VERSION     DAPGWB010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2626
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.297"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            473..616
                     /locus_tag="RHX79_004633"
     CDS             473..616
                     /locus_tag="RHX79_004633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YobF family protein"
                     /protein_id="HDV2199702.1"
                     /translation="MCGIFSKEVLSKHVDVEYRFSAEPYIGASCSNVSVLSMLCLRAK
                     KTI"
     gene            629..838
                     /gene="cspE"
                     /locus_tag="RHX79_004634"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             629..838
                     /gene="cspE"
                     /locus_tag="RHX79_004634"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HDV2199703.1"
                     /translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL
                     AEGQNVEFEIQDGQKGPAAVNVTAI"
     gene            1004..1813
                     /gene="rlmA"
                     /locus_tag="RHX79_004635"
     CDS             1004..1813
                     /gene="rlmA"
                     /locus_tag="RHX79_004635"
                     /EC_number="2.1.1.187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(745)-N(1))-methyltransferase"
                     /protein_id="HDV2199704.1"
                     /translation="MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKR
                     SRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHA
                     FADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCK
                     AEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSDELCY
                     PMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY"
     gene            complement(1810..2376)
                     /gene="mntP"
                     /locus_tag="RHX79_004636"
     CDS             complement(1810..2376)
                     /gene="mntP"
                     /locus_tag="RHX79_004636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP"
                     /protein_id="HDV2199705.1"
                     /translation="MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFG
                     AVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRR
                     HGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS
                     IIGKKAEILGGLVLIGIGVQILWTHFHG"
BASE COUNT          687 a          613 c          629 g          697 t
ORIGIN      
        1 ttgtgattaa gcgtggtatt atttattagc gaaacgtttc tctcttgatt ttttgctcat
       61 tcatcaattt ttcttatttt aagttttcaa tccctttggg gattgacttc tctttagggt
      121 aattgatagc cgttaactga ctgttttatg agaaaaagtg atataacttt ttattcattg
      181 catagcaaaa aatgtgatat tgcacgcact atgtaataac ttctcccact ggcctggaac
      241 aactgaactt attgaactat gttagaaact acgccagttt aagtatctgc ctgaactggc
      301 aaggttaagc acaatgatat atcggcgcgt attccgttgc ataagtgtgc aaaaaaagtg
      361 gaagacgtat cgagatttgt gcgtctgatc gagacatgtt taaaaatggc ttgccataat
      421 taacgttgta tgtgataaca gatttcgggt taaacgaggt acagttctgt ttatgtgtgg
      481 cattttcagt aaagaagtcc tgagtaaaca cgttgacgtt gaataccgct tctctgccga
      541 gccttatatt ggtgcctcat gcagtaatgt gtcagtttta tctatgttat gcctgcgggc
      601 gaagaaaaca atctaaggaa tttttcaaat ggcaaagatt aaaggtcagg ttaagtggtt
      661 caacgagtct aaaggttttg gcttcattac tccggctgat ggcagcaaag acgtgttcgt
      721 acacttctcc gctatccagg gtaatggctt caaaactctg gctgaaggtc agaacgttga
      781 gttcgaaatt caggacggcc agaaaggtcc ggcagctgtt aacgtaacag ctatctgatc
      841 gaatccactg atctgaagtg tgaatacgct tcaatctcgc tataaagcct cgtcgaatgc
      901 gaggcttttt actatgcttt atcttcgctc ctggcgttcg gatatttgcc cgccgcgtga
      961 ttcgcgttac acttgcggcc tttagtatcc tgccggagtt gtcatgtctt tttcctgtcc
     1021 actttgccat cagcctcttt cgcgtgaaaa aaacagctat atctgtcccc agcgacatca
     1081 gtttgatatg gcgaaagaag ggtatgtcaa tctgctgccc gttcagcata aacggtctcg
     1141 tgatccgggc gacagcgcgg aaatgatgca agcacgccgc gcattcttag atgccggaca
     1201 ttatcagccg ctgcgtgatg caattgtcgc ccaactgagg gaacggcttg atgataaggc
     1261 cacggcggtg ctggatattg gctgtggtga agggtattac acacacgcat ttgccgatgc
     1321 gttgcccgaa atcaccacgt ttggtctgga tgtttcgaag gtagcgataa aagcggcggc
     1381 gaaacgctat ccgcaggtca ctttttgtgt cgcttccagc caccgtttgc cgttttccga
     1441 taccagtatg gacgccataa tacgtattta cgcgccgtgt aaagcagaag aattagcacg
     1501 agtagtgaag cccggcggct gggtcattac tgccacgccg ggaccgcgac atttgatgga
     1561 gctgaagggg ctgatttaca atgaagtaca tcttcatgca cctcatgcag aacaactgga
     1621 aggttttaca ttacagcaga gtgatgagtt gtgttatccg atgcgtcttc gcggtgatga
     1681 agccgtcgca ttattgcaga tgacgccgtt tgcctggcgt gcgaagccag aagtctggca
     1741 aacactggca gcaaaagaag tgttcgactg ccagacggac tttaatattc acctctggca
     1801 gcgttcttat taaccgtgga agtgcgtcca gaggatctgg acgccgatgc cgatcagcac
     1861 cagcccgccg agaatttccg cttttttccc aataattgag ccgataaagc gaccaaccat
     1921 catccctaat gtcgacataa tcaaggttgc acaaccaatg gccaatgcgg tcgcgataat
     1981 gttgacctgc aggaaagcaa gaccaacacc cacagccatg gcatccaggc tggtggcaat
     2041 cgcggtggtt accagtagcc agaaaccgtg ccgacggcgc ggctcttcat cttcatcatc
     2101 tgcgccacga aaaccctcaa taatcattcg cccgccgagg aatatcagca gcacaaacgc
     2161 aatccagtgg ttccattcaa ggacaaaccg gctggctaac atgcccattc cccagccgat
     2221 cagcggcgtc agggtttcga cggcaccaaa aataaggccg gttcgcaatg cttcagaaaa
     2281 tttcggttta tggagggtgg cacctttacc gattgatgca gcaaatgcat ccatcgacat
     2341 accaaacgca agaagaacag tagcagtgat attcatgaca atgtcctgac cggggtatcc
     2401 ataaaacaca tcatcgcccc cagcaaacat gcatacatga acaacaagcc gtgatggttt
     2461 tcgcgttcat gcaggcatag cgattgatgt gcatatggtc tcgcctgact gaaagtattc
     2521 agtccgtacg tgccacgttt tgcaacgagt atgttgacac gtacatttcc ggaatctgga
     2581 aatcggctac tccccaaatg agggcgcaac cttaacatat tttgag
//
LOCUS       DAPGWB010000293         2625 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.298, whole genome shotgun sequence.
ACCESSION   DAPGWB010000293 DAPGWB010000000
VERSION     DAPGWB010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.298"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            97..1044
                     /gene="ompP"
                     /locus_tag="RHX79_004637"
     CDS             97..1044
                     /gene="ompP"
                     /locus_tag="RHX79_004637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001193612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease OmpP"
                     /protein_id="HDV2199706.1"
                     /translation="MQTKLLAIMLAAPVVFSSQEASASDFFGPEKISTEINLGTMSGK
                     TKERVYEPEEGGRKVSQLNWKYSNAAILKGAVNWELNPWLSVGAAGWTTLNSRGGDMV
                     DQDWMDSGTPGTWTDESRHPDTRLNYANEFDLNVKGWFLKESDYRLAIMAGYQESRYS
                     FNATGGTYIYSENGGFRNETGALPDKIKVIGYKQHFKIPYVGLTGNYRYDNFEFGGAF
                     KYSGWVRGSDNDEHYVRQTTFRSKVKNQNYYSVAVNAGYYITPEAKVYIEGVWSRLTN
                     KKGDTSLYDRSDNTSEHNNNGAGIENYNFITTAGLKYTF"
     gene            1149..>2625
                     /locus_tag="RHX79_004638"
     CDS             1149..>2625
                     /locus_tag="RHX79_004638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV2199707.1"
                     /translation="MKPLRRTLVIFIFSVFLCGTVSARQIEWQSCMTSPYSDWFGTES
                     PSPELLCGYLSVPLKYTDTGGDMSDENIPLVRLAMTKLPAKSKRKGSIIIISGGPGLP
                     GINPYISFDWPVTNLRESWDIIGFDPRGVGQSFPAINCQQPNQERSVNVSEKQLILQK
                     INACIHNTGAEVIRHIGSHEAVYDIERIRQALGDKQLTAVAYSYGTQIAALYAERFPS
                     SIRSIVFDGVVDIDDLNDNFSWKLRQAHSYQETFDRFAAWCARTKSCPLSSDRNQAIH
                     QFHQLLLKLHNSPLTDSRGESISSDDLISLTTELLLWRSSWPTLATAVRQFSQGIVSN
                     EIETALNSSIASEKVSDALGVILCVDQSDEQLSQEQRKSRKKALADAFPAVNFEREQS
                     DLPEFCELWPIHRDLQQTRLKNTVLPSGLLFVAHKYDPTTPWINARKMADKFSAPLLT
                     INGDGHTLALAGSNLCVDEAVVRHLLFPGKSEDITCQGSGTG"
BASE COUNT          794 a          497 c          601 g          733 t
ORIGIN      
        1 caaaagctaa acaaattaag tactgataat tgacttaccg gtgtacatca aaagaatcat
       61 atacatatgt agaagtgaca gaagggagtc atagttatgc aaactaagct tctggcaatt
      121 atgcttgcag cacctgtggt attcagttct caggaagctt ctgcttctga tttcttcggc
      181 ccggagaaaa taagtacaga gattaattta ggtacaatga gtggcaaaac aaaagaacgg
      241 gtttatgagc ctgaagaagg tggacgtaaa gtcagccaac tgaactggaa atacagtaac
      301 gccgccattc ttaaaggcgc cgttaactgg gagctgaatc catggttatc tgttggtgca
      361 gctggctgga ccactctcaa tagtcggggg ggggatatgg ttgatcagga ctggatggat
      421 tccgggactc ccggaacatg gacagatgaa agcaggcatc ctgatacacg tcttaattat
      481 gccaacgaat ttgatttgaa cgttaaaggc tggtttttaa aagaatctga ttatcgcctt
      541 gctattatgg caggttatca ggaaagccgt tacagtttta atgctacagg aggaacttat
      601 atttacagtg agaatggtgg tttccggaat gaaacgggag cgttacctga taaaataaaa
      661 gtgattggtt ataaacaaca ttttaaaatt ccttatgtcg gtctgacagg aaactaccgt
      721 tacgataatt ttgagtttgg tggtgcattt aaatacagcg ggtgggtcag gggatctgat
      781 aatgatgagc attatgtaag acaaactaca ttccgaagca aagtaaaaaa ccagaattac
      841 tattctgttg cagttaatgc cggttactat atcaccccag aggcaaaagt gtacatcgag
      901 ggtgtatgga gtcgtctcac aaataaaaaa ggggatacat ctctttacga ccgtagtgat
      961 aatacttcag agcataataa taacggggct ggaattgaaa attacaactt cattacgacg
     1021 gccggtctga agtacacgtt ttaacaactt taactgtcat catctccggt gagaattata
     1081 ccgccggaga ttctgtctgt tggtcatggt aataatttac caatgcagga gatgcaatgc
     1141 gtgtgataat gaagccttta agaaggactt tagtaatctt tatcttttct gtttttcttt
     1201 gcggaactgt gtctgccaga cagatcgagt ggcaatcctg tatgaccagc ccatacagtg
     1261 actggtttgg tacagaaagc ccttcacctg agttgttatg cggatatcta tctgtaccgc
     1321 taaaatatac cgacacaggt ggggatatgt cagatgaaaa tataccactt gtcagactgg
     1381 cgatgacaaa gttgccggca aaaagtaaac gtaaagggag tattattata ataagtggtg
     1441 gaccaggatt acccggaatt aatccttata tcagttttga ctggccggtc accaatcttc
     1501 gggaatcatg ggacattatc ggttttgatc cacgaggtgt cggtcagtcc tttcctgcca
     1561 taaattgcca gcaacccaat caagaaagat cggtgaatgt aagcgaaaag caactaattt
     1621 tacagaaaat taatgcctgt atccataata caggagctga agtcattcgc catattggat
     1681 ctcatgaggc tgtatatgat attgaacgca tcagacaagc tctgggagat aaacaactga
     1741 cagctgtagc atattcatac ggtacacaga ttgcagcctt atatgccgaa cgctttccat
     1801 ccagtatcag atctatagtt tttgacggtg tcgttgatat tgatgattta aatgataatt
     1861 tttcatggaa actcaggcag gcccacagtt atcaggaaac gtttgatcgt tttgctgcat
     1921 ggtgtgccag gacaaaaagt tgtccacttt cttcagacag gaatcaggca atacatcagt
     1981 tccatcagct tttattaaaa ttacataatt ctcctttaac agacagcagg ggggaaagta
     2041 tatcttcaga tgatctcata tcattaacga cagagcttct gttatggcgc tcatcatggc
     2101 caacacttgc aacggccgta cgtcagttct ctcagggtat tgtcagcaat gaaattgaaa
     2161 ctgcacttaa ttcttccata gcatcggaaa aagtcagtga tgctctgggt gtaatattat
     2221 gtgttgatca gagtgatgaa caattatcac aggaacaacg aaaatcgcga aaaaaagccc
     2281 ttgctgacgc atttccggcc gttaattttg agagggaaca gtccgattta cctgaatttt
     2341 gtgaattatg gccaattcat cgcgatctgc aacagacacg cctgaagaat actgttttac
     2401 catccggttt actgtttgtg gcacacaaat atgatccgac aactccctgg ataaatgccc
     2461 gtaaaatggc agataaattt tcagctccgt tactgactat taacggtgac gggcatacgc
     2521 tggcgctagc tggctctaat ttatgtgtgg atgaggctgt tgttcgtcac ctcctgtttc
     2581 cggggaaatc tgaagatata acgtgtcagg gaagtggtac cggag
//
LOCUS       DAPGWB010000294         2599 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.299, whole genome shotgun sequence.
ACCESSION   DAPGWB010000294 DAPGWB010000000
VERSION     DAPGWB010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.299"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..1861)
                     /gene="traD"
                     /locus_tag="RHX79_004639"
     CDS             complement(<1..1861)
                     /gene="traD"
                     /locus_tag="RHX79_004639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001589353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="HDV2199708.1"
                     /translation="MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLV
                     LWIKISWQTFVNGCIYWWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMI
                     WCSEQLWSAFVLAAVVALVICLITFFVVSWILGRQGKQQSENEATGGRQLTDNPKDVA
                     RMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVI
                     YDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDP
                     FWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIE
                     KTAISIRAVLTNYVKAIRYLQGIEHNGESFTIRDWMRGVREDQKNGWLFISSNADTHA
                     SLKPVISMWLSIAIRGLLAMGENRNRRVWFFCDELPTLHKLPDLVEILPEARKFGGCY
                     VFGIQSYAQLEDIYGEKAAATLFDVMNTRAFFRSPSHKIAEFAAGEIGEKEHLKASEQ
                     YSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQARP
                     KVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAE"
     gene            complement(2114..>2599)
                     /locus_tag="RHX79_004640"
     CDS             complement(2114..>2599)
                     /locus_tag="RHX79_004640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309339.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199709.1"
                     /translation="VVTSPDKAYYWIQANVLKADKMDLRESQGWLNRGYEGAAVGAAL
                     GAGITGYNSNSAGATLGVGLAAGLVGMAADAMVEDVNYTMITDVQIAERTKATVTTDN
                     VAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEDQLAKSIANI
                     L"
BASE COUNT          644 a          708 c          624 g          623 t
ORIGIN      
        1 gttcagcctg agtcacgtct tctccggaaa caacttccgg cacatccggt tcgaagaggc
       61 tggccatctg acgaccttct gcttcccttg cggcaagtac ggcgctcagg cggttctcca
      121 tttccgggtt gatgtcacgc ggaataaact caggggcaac cttcggacgt gcctgatatt
      181 tcagtgagag ttttactgcc ggatacggtc cgggcagggt gacataacag gtcaaatccg
      241 gcagagactg aatgtcggaa taactgacca gcgtctggcg ctccatatcc ttaccggtcg
      301 ataccccgtc acgtaccgga tcagcaccgt aggagtactg ctcgctggct ttcaggtgct
      361 ctttctcacc aatctcaccg gcagcgaact ctgcaatctt atggctggga gaacggaaaa
      421 aggcacgggt gttcatgacg tcaaacagcg tggcagccgc tttctcaccg tagatatctt
      481 ccagctgggc ataggactgg ataccaaaca cataacagcc accgaactta cgggcttccg
      541 gcaggatctc caccaggtcc ggcagtttgt gtaacgtggg tagctcatca cagaaaaacc
      601 acacacgacg gttacggttt tctcccattg ccagcagacc acgaatggca atggacagcc
      661 acatggagat caccggcttc agggaggcat gggtgtcggc attcgacgag ataaacagcc
      721 agccgttttt ctgatcttcc cggacacccc gcatccagtc acggatggta aaagactcac
      781 cgttatgctc aatcccctgc aggtaacgga tggctttcac gtagttggtc agcacagcac
      841 ggatggaaat cgccgttttc tcaattttct cttccaccag gttggccgcc ggtgaattac
      901 gcaggaaggt acgcagtttt tcgattttga tggaaagcag tgtgtccacc agtttgctgt
      961 agctacggtt ggggtcatta cgcatcaggt acgccgcttc cgcaaaaatg gtacgtcctg
     1021 aaccctgcca gaacgggtcc tcttttgtgc ccatcgggat cagggtattt gccgtattat
     1081 caaaatccgg ctgtgtcaga cactccttcc ataaatccca ggcggcacag cgggcatcca
     1141 gcggattcag gattttatcg atggagggat catagtaact tttaacaaat tcccccgaac
     1201 ggtcataaat caccaccata tcaccgcgct gacgggcgta gttggccaga cgacggataa
     1261 cttccgactt accggccccg accgtgccgt gcagacagaa gttctggatt tcggaatccc
     1321 ggataatcgg caggtctcca atccggatat cggagtcctt gccgtctttt ttcagcatcc
     1381 gggcaacgtc tttcggattg tctgtcagct gacgaccacc tgtggcttca ttttcgctct
     1441 gttgtttacc ctgacgcccc agaatccagg agacaacaaa gaaggtaatc aggcaaataa
     1501 ccagtgccac aacagcagcc agcacgaagg cggaccataa ctgctcactg caccagatca
     1561 tatatttgtc atgcagtacc tgagcagcgt tcatgcggaa ggttttaccg taatactgga
     1621 tctcatagac cggctgggat ttgattaaat cccgcatgcc ttccagcgtg gtacaccacc
     1681 agtaaataca gccgttcaca aacgtctgcc agcttatttt tatccataaa accagaccaa
     1741 cgagtatcca gaaaaaaata aacaggcagt aaagcatgat attggcgatc tggctgaaca
     1801 tgcggatacg catggacgca atctgaccgc cctgggtcat atcctttgcg ttaaaactca
     1861 tgatgatatt ccgaagaaaa aaagtcagtc ggactgatta ttaatgatga aaagattaat
     1921 aaccgttaaa ttccggcttc gccggcaaca cttcacggtc gcacaaagaa tttgcacaac
     1981 cgctcagtgt tttcatattt atttcggaaa cgccggggag aaataaaatt tattttattt
     2041 ctttccgggg ttggacaacg agcaaagcga ggcgtcagtc aggaggccgg tcagaccagc
     2101 ctccggaaga taatcagaga atatttgcga ttgatttggc cagctggtct tcgagaacag
     2161 gcttcgcctc ttcaaatttc aggttaacct tgttcgcatt tgagaccaca cgggtctggt
     2221 atttatgctg gttacctgtt tctgtactgg tctgaatttt cgcacctgat gtgccctgac
     2281 gcagggcggc aacattatcc gttgtcaccg ttgccttagt acgctctgca atctgcacat
     2341 ccgtgatcat ggtatagttc acatcttcca ccatcgcatc tgcagccata cccaccagac
     2401 cggcagcaag gcccacaccg agtgtggcac cggcagaatt ggaattatat ccggtgatac
     2461 cggcacctaa cgctgcacca actgctgcgc cttcataacc acggttcagc catccctgag
     2521 actcccgcag atccatctta tcggccttca gcacattcgc ctgaatccag tagtaggctt
     2581 tatccggaga agtcaccac
//
LOCUS       DAPGWB010000295         2589 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.300, whole genome shotgun sequence.
ACCESSION   DAPGWB010000295 DAPGWB010000000
VERSION     DAPGWB010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2589
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.300"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..226
                     /locus_tag="RHX79_004641"
     CDS             <1..226
                     /locus_tag="RHX79_004641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199710.1"
                     /translation="TLNDYAVIFIRNALNASEHIIIFNCTGWSDLNNESAVMQFARVA
                     RKSGKQLIVAVREQDMKKMEAEFGRIIKIH"
     gene            449..655
                     /locus_tag="RHX79_004642"
     CDS             449..655
                     /locus_tag="RHX79_004642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001362723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HDV2199711.1"
                     /translation="MKYLNTTDCSLFLAERSKFMTKYALIGLLAVCATVLCFSLIFRE
                     RLCELNIHRGNTVVQVTLAYEARK"
     gene            939..1187
                     /gene="repA"
                     /locus_tag="RHX79_004643"
     CDS             939..1187
                     /gene="repA"
                     /locus_tag="RHX79_004643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000083832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication regulatory protein RepA"
                     /protein_id="HDV2199712.1"
                     /translation="MSQTENAVTSSSGTKRAYRKGNPLTLAERQQASLARKRATHKEL
                     RVFIPAALKAQLQEMCEAEGVTQAEMIAELIKQKSAFS"
     gene            1429..1503
                     /gene="tap"
                     /locus_tag="RHX79_004644"
     CDS             1429..1503
                     /gene="tap"
                     /locus_tag="RHX79_004644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001370046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepA leader peptide Tap"
                     /protein_id="HDV2199713.1"
                     /translation="MPGKVQDFFLCSLLLRIVSAGWCD"
     gene            1496..2353
                     /gene="repA"
                     /locus_tag="RHX79_004645"
     CDS             1496..2353
                     /gene="repA"
                     /locus_tag="RHX79_004645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="incFII family plasmid replication initiator
                     RepA"
                     /protein_id="HDV2199714.1"
                     /translation="MTDLQQTYYRQVKNPNPVFTPRKGAGTLKFCEKLMEKAVGFSSR
                     FDFAIHVAHARSRGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSITTLAIECG
                     LATESGAGKLSITRATRALTFLSELGLITYQTEYDPLIGCYIPTDITFTPALFAALDV
                     SEDAVAAARRSRVEWENRQRKKQGLDTLGMDELIAKAWRFVRERFRSYQTELKSRGIK
                     RARARRDANRERQDIVTLVKRQLTREIAEGRFTASREAVKREVERRVKERMILSRNRN
                     YSRLATASP"
BASE COUNT          675 a          624 c          684 g          606 t
ORIGIN      
        1 aacattaaat gattatgctg ttatttttat caggaatgcg ctgaacgcca gtgagcatat
       61 tattattttt aattgtacag gatggtctga tttgaataat gaatctgccg tcatgcagtt
      121 tgccagagtg gcacgaaaat caggaaaaca actgatagtc gcagtaagag aacaggatat
      181 gaaaaaaatg gaagcagagt ttggaaggat cataaaaatc cactgacgcc ttcgcgttgc
      241 tcagttgtcc aaccccgggg acgggaaaaa gcaagttttc cccgcccccg gcttttctgt
      301 agtgaaaagc gggaaatgga gggaatggtc agtaacaggg aatgtggtat tatcgcggcg
      361 ggtgtctgag cctttctggt tcaggcaaga cgcaggtacc agaaatgcga agaccccact
      421 tgttaatcca ttaactcgtg aggcctgcat gaagtacctt aacactactg attgtagcct
      481 cttccttgca gagaggtcaa agtttatgac gaaatatgcc cttatcgggt tgctcgccgt
      541 gtgcgccacg gtgttgtgtt tttcactgat attcagggaa cggttatgtg agctgaatat
      601 tcacagggga aatacagtgg tgcaggtaac tctggcctac gaagcacgga agtaagctgc
      661 cgggcgggga gggaagtccc cgctttccgg aagtgtgagg tatttcaggg gcagacaccc
      721 gacatgccag aaacagccgg tcccgcccgg ggccggcaca caggttaagg catttccatc
      781 ttttcagtca tttcattatc aaaatcacat taaacggtcg taatcagaca tgatttgtgc
      841 gccaacacag atcatcgtca caactttcaa gtcgctgatt tcaaaaaact gtagtatcct
      901 ctgcgaaacg atccctgttt gagaattgag gaggcgagat gtcgcagaca gaaaatgcag
      961 tgacttcctc atcaggtaca aagcgagcat acagaaaagg taatcctctg acgcttgcag
     1021 aacgtcagca ggcatccctg gcaagaaaac gagccacaca taaagaactc agagtgttta
     1081 ttcctgctgc gttaaaagcg caattgcagg agatgtgtga agctgagggt gttactcagg
     1141 ctgagatgat tgccgaactg ataaagcaga agagtgcttt tagctaactg aaatgtagcg
     1201 acatcacatt cttgcctgtt tctggtgtgc gtgatagatt gctgatcgtt taaggaattt
     1261 tatggctggc cacgccataa ggtggcaggg aactggttct gatgtggatg tacaggagcc
     1321 agaaaagcaa aaaccccgat aatctttcta tgtttggcga cgagaagatt accggggccc
     1381 cataaaaccg catagccaac aattcagcta tgcggggagt atagttatat gcccggaaaa
     1441 gttcaagact tctttctgtg ctcactcctt ctgcgcattg taagtgcagg atggtgtgac
     1501 tgatcttcaa caaacgtatt accgccaggt aaagaacccg aatccggtgt ttacaccccg
     1561 taaaggtgcc ggaacgctga agttctgcga aaaactgatg gaaaaggcgg tgggcttctc
     1621 ctcccgtttt gatttcgcca ttcatgtggc gcatgcccgt tcgcgtggtc tgcgtcggcg
     1681 catgccaccg gtactgcgtc gccgggccat tgatgcgctg ctgcaggggc tctgttttca
     1741 ctatgatccg ctggccaacc gcgtccagtg ctccatcacc acgctggcca ttgagtgcgg
     1801 actggcgaca gagtccggtg caggaaaact ctccatcacc cgtgccaccc gggccctgac
     1861 gttcctgtca gagctgggac tgattaccta ccagacggaa tatgacccgc ttatcgggtg
     1921 ctacattccg accgacatca cgttcacacc ggctctgttt gctgcccttg atgtgtctga
     1981 ggatgcagtg gcagctgcgc gccgcagtcg tgttgaatgg gaaaacagac agcgcaaaaa
     2041 gcaggggctg gataccctgg gtatggatga actgatagcg aaagcctggc gttttgtgcg
     2101 tgagcgtttc cgcagttacc agacagagct taagtcccgt ggaataaaac gtgcccgtgc
     2161 gcgtcgtgat gcgaacaggg aacgtcagga tattgtcacc ctggtgaaac ggcagctgac
     2221 gcgtgaaatc gcggaaggac gtttcactgc cagtcgtgag gcggtaaaac gcgaagtgga
     2281 gcgtcgtgtg aaggagcgca tgattctgtc acgtaaccgt aattacagcc ggctggccac
     2341 agcttccccc tgaaagtgac ctcatcagaa taatccggca cgcgccggag gcattcgcac
     2401 gcctgaagcc cgccagtgca caaaaaatca gcaccacata caaaaaacaa cctcatcatc
     2461 caccttctgg tgcatccggt cccccctgtt tttgatacaa aacacgcctc acagacgggg
     2521 gattttgctt atccacattt aactgcaagg gacttcccca taaggttaca accgttcatg
     2581 tcataaagc
//
LOCUS       DAPGWB010000296         2583 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.301, whole genome shotgun sequence.
ACCESSION   DAPGWB010000296 DAPGWB010000000
VERSION     DAPGWB010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.301"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(15..617)
                     /locus_tag="RHX79_004646"
     CDS             complement(15..617)
                     /locus_tag="RHX79_004646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000090847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDV2199715.1"
                     /translation="MARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSD
                     GWYQIRIAGRDTGENELSARLNEPLANGAVIHIVPRLAGAKSGGVFQAVLGAAVMAVA
                     IWMPGVGIMASNLLFSLGASMTLGGVAQMLAPKPKTPRTQTTDNGKQNTYFSSLDNMV
                     AQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
     gene            complement(554..1297)
                     /locus_tag="RHX79_004647"
     CDS             complement(554..1297)
                     /locus_tag="RHX79_004647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2199716.1"
                     /translation="MTETESAILAHARRCAPAESCGFVVSTPEGERYFPCMNISGEPE
                     GYFRMAPEDWLQAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHREDDWWRHGQNLYLDNMEAT
                     GFYRVALTEAQPGDVLLCSFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHRAWHASAFTGICNDLAAASTFV"
     gene            complement(1302..2000)
                     /locus_tag="RHX79_004648"
     CDS             complement(1302..2000)
                     /locus_tag="RHX79_004648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDV2199717.1"
                     /translation="MQDIRQETLNECTRAEQSASVVLWEIDLTEVGGERYFFCNEQNE
                     KGEPVTWQGRQYQPYPIQGSGFELNGKGSAARPTLTVSNLYGMVTGMAEDLQSLVGGT
                     VVRRKVYARFLDAVNFVNGNSDADPEQEVISRWCIEQCSELSAVSASFVLSTPTETDG
                     AVFPGRIMLANTCTWTYRGDECGYHGPAVADEYDQPTSDITKDKCSKCLSGCKFRNNV
                     GNFGGFLSINKLSQ"
     gene            complement(2000..2329)
                     /locus_tag="RHX79_004649"
     CDS             complement(2000..2329)
                     /locus_tag="RHX79_004649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDV2199718.1"
                     /translation="MKTFRWKVKPGMDVASVPSVRKVRFGDGYSQRAPAGLNANLKTY
                     SVTLSVPREEATVLESFLEEHGGWKSFLWTPPYEWRQIKVTCAKWSSRVSMLRVEFSA
                     EFEQVVN"
     gene            complement(2326..>2583)
                     /locus_tag="RHX79_004650"
     CDS             complement(2326..>2583)
                     /locus_tag="RHX79_004650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDV2199719.1"
                     /translation="GNLYRLMRGYATGGYVGGTGSPAQMRRSEGIRFEQNNNVVIQND
                     GTNGLPGPQMMKAVYDMARKGARDEIQTQMRDGGLFSGGGR"
BASE COUNT          573 a          837 c          623 g          550 t
ORIGIN      
        1 ataaacgttt ttcatcagcg accaatcacc acaacctgac caccatcccc ttcgtctgcc
       61 gtgctgatct cctgagagac cacccgcgac cccacgcgca tttcaccgta cagaacgggc
      121 agaacattgc cctgggcaac catattatcc agtgaagaaa aataggtgtt ctgtttgccg
      181 ttatccgttg tctgtgtgcg gggggttttg ggtttagggg ccagcatctg tgcaacaccg
      241 ccaagcgtca tactggcacc gagagaaaac agcagattac tcgccataat tcctaccccc
      301 ggcatccata tagcaaccgc cataacagcc gcccccagca cagcctgaaa cacaccgcca
      361 cttttggctc ctgccagacg cggcacgatg tggatcacag caccatttgc cagcggttca
      421 ttaagacggg ctgataattc gttttcacct gtatcacgcc cggcaatccg tatctgatac
      481 cagccatcgc tcagtttctg acgaaacgcc gggagctgtg tggccagcgc ccggatggct
      541 tcagcccccg ttttcacacg aaggtcgatg cggcggccaa atcgttgcaa atccccgtaa
      601 aggcagatgc gtgccatgcc cggtgacgcc agagggagtg tgtgcgtcgc tgccatttgt
      661 cggtgtacct ctctcgttta ctcagttgtt caggaatatg gtgcagcagc tcaccgtcac
      721 cacagtaaat ggcagcatga ttcggcaccg atgaaccaaa gctgcacagc agcacgtcgc
      781 caggctgcgc ctctgtcagt gcgacacggt aaaaacccgt tgcctccata ttgtcaagat
      841 agagattctg accgtgacgc caccagtcat cctcgcgatg aaaatccggc atctcaatcc
      901 ccgccagatg ataagcatcc cggaacagcg tgtaacagtc cgtcaccccg tgctcaaagc
      961 gacgcccggt gagatgcggc acacagcgga acttgtgaat cgccccccgg cagaccagcc
     1021 accacggcaa atcactctgc acctgcagcc gccggtcagc ctcactcagc cagggcagac
     1081 caccgggatg actgtggacc agtgccacaa tctcaccctg catctctgcc tgcagccagt
     1141 cctccggagc catccggaaa taaccctccg gctcaccgga aatattcatg cagggaaaat
     1201 atctttcccc ctccggcgtg cttaccacga agccgcacga ctccgctggc gcacatcgcc
     1261 gggcgtgcgc cagaatcgct gattctgttt ctgtcatggg tttactgcga aagtttgtta
     1321 atggaaagga agccgccaaa gttgccgacg ttattgcgaa acttacagcc actcaggcat
     1381 ttgctgcatt tatctttcgt gatatcggat gttggctggt catattcatc cgcgacagcc
     1441 ggaccgtgat aaccgcactc atcaccgcga taggtccagg tgcaggtgtt ggccagcatg
     1501 atacgtcccg gaaaaacagc gccgtccgtt tccgtcggcg tggacagtac aaaagaggca
     1561 ctcaccgcgc tcagttcgct gcactgctca atgcaccagc ggctgatcac ctcctgctcc
     1621 ggatcggcgt cactgtttcc gttgacgaag ttcaccgcat ccagaaaacg ggcgtaaacc
     1681 ttacgccgga ccaccgttcc gccaaccaga ctctgcagat cttccgccat cccggtgacc
     1741 atgccgtaca ggttagagac cgtcagtgtc ggacgggcag cactgccctt gccgttcagt
     1801 tcaaaaccgc tcccctgaat gggatacggc tgatactgtc gcccctgcca ggtgaccggc
     1861 tcaccttttt cgttctgctc attacagaaa aaataacgtt ctccaccgac ctctgtcagg
     1921 tcgatttccc agagcaccac gctggccgac tgctccgcac gggtgcattc attcagtgtt
     1981 tcctgccgga tatcctgcat cagttcacca cctgttcaaa ctctgcgctg aactcaacac
     2041 gcagcatact gacccgcgac gaccattttg cgcaggtcac ctttatctgc cgccactcat
     2101 aaggcggcgt ccacagaaag gatttccagc ccccgtgctc ttccagaaac gactccagta
     2161 ccgtggcctc ctcacggggg acagaaagcg tcacgctgta cgttttcagg ttggcattca
     2221 gcccggcagg cgctcgctgg gaatagccat caccaaagcg cacctttctt acagaaggga
     2281 ccgaagccac atccataccg ggtttcactt tccagcggaa ggtcttcatc gtccacctcc
     2341 ggagaacagg ccaccatcac gcatctgtgt ctgaatttca tcacgggcac ccttgcgggc
     2401 catgtcatac actgctttca tcatctgtgg acctggcaga ccattcgtac cgtcgttctg
     2461 aatcaccacg ttgttgttct gctcaaacct gataccctct gaacgccgca tttgcgccgg
     2521 acttccggtg ccaccgacat aaccgccggt ggcatagccg cgcatcagcc ggtagagatt
     2581 tcc
//
LOCUS       DAPGWB010000297         2547 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.302, whole genome shotgun sequence.
ACCESSION   DAPGWB010000297 DAPGWB010000000
VERSION     DAPGWB010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2547)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2547)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.302"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            93..1706
                     /gene="mppA"
                     /locus_tag="RHX79_004651"
     CDS             93..1706
                     /gene="mppA"
                     /locus_tag="RHX79_004651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415845.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide ABC transporter
                     substrate-binding protein MppA"
                     /protein_id="HDV2199720.1"
                     /translation="MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDE
                     PASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNA
                     KWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTA
                     VDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERV
                     VNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKL
                     LKDIPGQVYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPA
                     WHFTPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQ
                     KIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLL
                     TSTHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMEQAPIAPIYQYTNG
                     RLIKPWLKGYPINNPEDVAYSRTMYIVKH"
     gene            complement(1757..>2547)
                     /gene="ynaI"
                     /locus_tag="RHX79_004652"
     CDS             complement(1757..>2547)
                     /gene="ynaI"
                     /locus_tag="RHX79_004652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="low conductance mechanosensitive channel YnaI"
                     /protein_id="HDV2199721.1"
                     /translation="CTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSRIIKIT
                     IIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGD
                     WIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTI
                     GLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVW
                     AEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPEQGR"
BASE COUNT          726 a          577 c          617 g          627 t
ORIGIN      
        1 ctgtgtcact tttttgatgg aagttgtttg catttcttta aggcgaaaca aataattacg
       61 catcaatttt aatgtcggtt agagggaaac ttatgaagca ctctgtttca gtcacgtgtt
      121 gtgcgctgtt ggtcagcagc atttctcttt cgtatgctgc agaagttccg agcggcacag
      181 tactggcaga gaagcaggag ctggtgcgcc acattaaaga tgagcctgcg tcgctggatc
      241 ccgctaaagc cgtgggcctg ccagagattc aggtcattcg cgatctgttt gaaggactgg
      301 tgaatcagaa cgagaaaggg gagattgtcc ccggcgttgc gactcagtgg aaaagtaatg
      361 acaaccgtat ctggactttt accctgcgcg ataacgcaaa atgggcggat ggcacaccgg
      421 taacggcgca agattttgtc tacagctggc aacgtctggt ggacccgaaa actctatcgc
      481 catttgcatg gtttgccgcg ctggcgggaa tcaacaacgc acaggcgatt attgatggta
      541 aagctacgcc tgaccagctt ggcgtcaccg cagttgatgc ccatactttg aaaattcagc
      601 ttgataaacc gttgccgtgg tttgtgaatt taaccgctaa ctttgccttc ttcccggtgc
      661 aaaaagccaa cgtagaaagc ggtaaagagt ggacgaaacc cggaaatctg attggcaatg
      721 gcgcttatgt tcttaaagag cgcgtagtca atgaaaaact ggtcgtggta ccgaataccc
      781 attattggga taacgccaaa acggtactgc aaaaagtgac cttcctgcca attaatcagg
      841 aatccgcagc cactaagcgt tacctcgcgg gggatattga tatcaccgaa tccttcccga
      901 aaaatatgta tcagaagctg ttgaaggata ttccggggca ggtttatacg ccgccgcagc
      961 tcgggaccta ttattatgcg tttaacacgc aaaaagggcc gacggcagat cagcgcgttc
     1021 gtctggcatt aagtatgacg atagatcgcc gcctgatgac cgaaaaagta ttagggacgg
     1081 gcgaaaagcc agcgtggcat tttacaccag atgttaccgc cggatttacg ccggaacctt
     1141 cgccgtttga acaaatgagt caggaagaac tgaatgcgca ggcaaaaact ttgttgagcg
     1201 cagctggtta tggtccgcaa aaaccgctga agctgacgct tttgtataac acttcagaaa
     1261 accatcaaaa aattgcgatt gctgtagcat cgatgtggaa aaagaacctt ggcgtagatg
     1321 ttaaattgca aaatcaggaa tggaaaacct atatcgatag ccgtaacacc ggcaattttg
     1381 atgttatccg cgcctcatgg gtgggggatt ataatgaacc ctccactttc ctgacattat
     1441 taacgtcaac gcattcagga aatatttcgc gctttaacaa tccggcatat gacaaagttc
     1501 tggcccaggc atcgacggaa aataccgtta aagcgcgtaa tgccgattac aacgcggcag
     1561 aaaaaatcct catggagcaa gcaccgattg caccaattta tcaatatacc aatggacgat
     1621 taatcaaacc gtggctgaaa ggttatccca ttaataaccc tgaagatgtg gcgtacagtc
     1681 ggactatgta tattgtgaag cattgatgtg atgggaactg gcgttaccct tgtggataac
     1741 gccagtgatg tctgatttag cgaccctgtt ccggcggtgt aatgttatcc atatacagcg
     1801 tctggctggg gaaggcaaag tccgcgccgt gtgactgtac aatatcgata atcttcaaat
     1861 aaacgtcttg ctgtgcagca agccattcag cccataccgt ggttttggta aagcaataaa
     1921 ccataatatt caatgacgag tcggcaaact ggttgaaata aaccagtaag gtttgtcgct
     1981 ggtcgatggc cgggtgattt ttcagcatct cacgtacggc ttcgacaata acgcccactt
     2041 ttgccgcatc ctcataacgt aaaccaatgg tcgtggtaat gcggcggttg gtcattcgtc
     2101 ctgggttttc tacgctgatc gacgaaaaca gcgagttcgg tacgtacaat ggacgattat
     2161 caaaggtcgt aattttggta attcgccagc caatttccgc tactgtacct tcgatatttc
     2221 tgtccggtga acggatccag tcgccaatac tgaaaggacg gtcgaaatag agcatgatcc
     2281 cggaaaagaa attactcaga atatctttac cggccatacc gacagccaga ccaccaatac
     2341 caccaaaggt caacaagcca gaaaggctca tgccgaaatg ttcgccataa agcagaacaa
     2401 gcaccacaat aatggtgatt ttgataatgc gcgacataat ccgcgcactg gtgatatcgc
     2461 gacctttttt aatctgctgt ttttcaaact gattaatcag caaaaatagc ttaatcgtca
     2521 gaataaccgc aatcagggac gtacaga
//
LOCUS       DAPGWB010000298         2547 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.303, whole genome shotgun sequence.
ACCESSION   DAPGWB010000298 DAPGWB010000000
VERSION     DAPGWB010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2547)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2547)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.303"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            106..1338
                     /locus_tag="RHX79_004653"
     CDS             106..1338
                     /locus_tag="RHX79_004653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000777725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV2199722.1"
                     /translation="MKLSNIVTVIILAISSTLTPQAMAEKLIPETDAELLVWSDATSV
                     EYMKYAAKEFNKDFGYKVKFTFRNIAPMDAASRIMQDGGTTRVADVAEIEHDTLGRLV
                     VAGGVMENMVSAERIKKTFIPGAVSAATYNNISYGFPVSFATLALFYNKDLLNTAPKT
                     FEEINTFSEKFNNSSEHKYALLWDVQNYYVSRMFITLYGANEFGKTGNDPKALGIASS
                     EAKKGLETMKRLKKANPSNPLDMGNPQVLRGLFNEGKVAAVIDGPWSIQGYIDSGINF
                     GVTRIPTLDGHQPRTFSTVRLAVVSSFTEYPHAAELFADYLTTDKMLMKRYEMTNLIP
                     PIDSLMNKISQTGSEAIKAIIAQANYSDAMPSIPEMSYLWSPMTNAILATWVENKTPD
                     EVLNHAQTIIEEQLSLQE"
     gene            1341..>2547
                     /locus_tag="RHX79_004654"
     CDS             1341..>2547
                     /locus_tag="RHX79_004654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016243614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDV2199723.1"
                     /translation="MNTQQLKMKSAPVLPISCLIMGGTQLSRHYYVKGGIFFAIQVCF
                     LLYLSDIVHTLIGLFTLGDVAQIRKGLTVIQGDNSIFMLVEGVIAAIIVGLFATIYTL
                     NIKDARNSSYCHLTFKQQLYKLYEDKFAFIVLTPAFLASIAFIVLPIVITVLVSVTNY
                     AAPNHIPPKNLVDWVGIKNFIMLFKFKIWSDTFLGIALWTFIWAICATIFTFSFGFIL
                     ALALAKKNIRFAKVWRLIFILPYVIPTFVTLLIFRLLLNGIGPVNSFLNSIGMNSVDF
                     LSVSLNAKITVIAVCVWVGAPYFMLLIAGALTNISRDLYEASEVDGATKWQQFKEITL
                     PMVLHQVAPTLVMTFAYNFNNFGAIYLLTEGGPTNPEYRFAGHTDIFITWIYKLTLNF
                     QQYHIASVIS"
BASE COUNT          750 a          464 c          521 g          812 t
ORIGIN      
        1 ttatttgaca gttgattggc cttgatttgt gttgataatg gcgtgaatgc ttatgtggtc
       61 gtacagcatg tactacttaa agatgttatt catgaggtaa atataatgaa gctttcaaat
      121 atcgtcacag ttataattct tgcaatttcc agtacgctaa caccccaggc gatggcagaa
      181 aaattaattc ctgaaactga tgctgagttg ttagtttggt ctgatgccac aagcgtggaa
      241 tatatgaaat atgcagcaaa ggaattcaat aaagattttg gctacaaggt aaagtttaca
      301 tttcgcaata tagcgccaat ggatgcagca tcaagaatta tgcaggatgg gggtacgact
      361 cgtgtagctg atgtagctga aattgaacat gataccctgg ggcggttagt cgttgctggc
      421 ggggttatgg aaaacatggt ctcagctgag cggattaaaa aaacatttat tccaggcgca
      481 gtatcggcag ctacatataa taacatcagc tatggttttc ctgtaagttt cgcaacgctg
      541 gcgcttttct ataataagga tttgttaaac accgcaccaa aaacattcga agaaatcaat
      601 actttcagtg aaaagtttaa taattcatcc gagcataaat atgctctgct atgggatgta
      661 caaaattatt atgtttcacg tatgtttatt accttgtatg gtgccaacga attcggtaaa
      721 accggtaacg atcctaaagc tctaggcatc gcttcatctg aagcgaagaa agggctagag
      781 acgatgaaac gcttaaagaa agcgaatccc tctaatcctc ttgatatggg taatccacaa
      841 gttctaagag gtctgtttaa tgaaggtaaa gttgctgctg taatcgacgg accttggtcc
      901 atacaaggtt acattgacag cggaatcaat tttggcgtga cacgcatccc aacattagat
      961 ggtcatcagc ctcgcacatt ttcaacagta cggctggccg ttgtaagctc atttaccgaa
     1021 tatcctcatg ccgctgaatt attcgctgac tacctgacaa cggataagat gttgatgaag
     1081 cgttatgaaa tgacgaatct catcccacca atcgattcac ttatgaacaa aattagccag
     1141 acaggtagtg aagctataaa agcaattatt gctcaagcta attattctga cgcaatgcca
     1201 tcaataccgg aaatgtctta tctatggtct ccaatgacta atgctatttt ggctacctgg
     1261 gttgagaata aaacaccgga tgaagtttta aatcatgcac aaacaattat tgaagaacaa
     1321 ctttcgcttc aggagtaatt gtgaatacac aacaactgaa aatgaagagt gcacctgtgc
     1381 tacctatttc ctgtttgatt atgggcggga ctcagttatc acgtcattat tatgtgaaag
     1441 gcgggatatt ctttgcaata caagtatgct ttttgcttta tctttccgat attgtgcata
     1501 cattaatagg tttgttcaca ttaggtgatg tcgcgcaaat tcgaaaaggg ttgactgtta
     1561 ttcagggtga caattctata tttatgcttg tagagggcgt gatagcggcc attattgttg
     1621 gcttattcgc cactatttac acccttaata ttaaagatgc gcggaactca tcttattgcc
     1681 atctgacttt taaacaacag ttatataagc tctatgagga taaatttgca tttatagtcc
     1741 taacgcccgc atttttagcg agtatagcat tcattgtttt acctattgta attacagttc
     1801 ttgtatcggt tacaaactat gctgcgccaa atcacatccc accaaagaac ctggttgatt
     1861 gggttgggat taaaaatttc ataatgttgt ttaaatttaa aatatggtct gatacgtttc
     1921 taggtatcgc tctctggaca tttatttggg caatatgtgc gacgattttt accttcagtt
     1981 ttggatttat tttggcttta gcactggcta aaaaaaatat acgtttcgca aaggtctggc
     2041 gattgatatt tatactgcca tatgtcatac ccacatttgt aacgttactt attttccgtc
     2101 ttcttttaaa tggaattggt ccggttaact cgtttctgaa cagtatcgga atgaattcag
     2161 ttgattttct gtcggtttca ttaaatgcaa aaataacagt aattgccgtt tgtgtttggg
     2221 taggggcacc gtattttatg ctattgatcg cgggtgcatt aaccaacata tcccgagatt
     2281 tgtatgaggc tagtgaggtc gatggcgcaa ctaagtggca acagtttaag gaaattacat
     2341 tgccaatggt gttacatcaa gttgcgccaa ctctggtaat gacatttgca tataacttca
     2401 ataattttgg tgcaatttat cttctgactg aaggtggtcc gactaatccg gaatacagat
     2461 tcgctgggca taccgatatt tttattacct ggatttataa actcacattg aatttccagc
     2521 aatatcatat agcttctgta atctcca
//
LOCUS       DAPGWB010000299         2483 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.304, whole genome shotgun sequence.
ACCESSION   DAPGWB010000299 DAPGWB010000000
VERSION     DAPGWB010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.304"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(248..466)
                     /locus_tag="RHX79_004655"
     CDS             complement(248..466)
                     /locus_tag="RHX79_004655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199724.1"
                     /translation="MNNSNNLDYFTLYIIFSIAFMLITLLVILIAKPSTGLGEVLVTI
                     NLLNALVWLAINLVNRLRERLVNHRDQQ"
     gene            complement(598..2121)
                     /locus_tag="RHX79_004656"
     CDS             complement(598..2121)
                     /locus_tag="RHX79_004656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707066.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDV2199725.1"
                     /translation="MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANN
                     INHILEEASQATQTAVNIAGKECDLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLP
                     GNRVLLSRIPVVPDSNLLLAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNV
                     PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLI
                     DKGFGILIFILLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGT
                     LRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEG
                     FHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNIL
                     HENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLAR
                     KLSISIVAEGVETKEQLDYLNQNNITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE"
BASE COUNT          749 a          538 c          522 g          674 t
ORIGIN      
        1 attatcattt ttcaccttat tttcatgaca ttgatcactt tagggtgacg attttgttta
       61 acaaataact cttcgacatc aaaattgtta atagttgcga tgaggattat ttcggtgata
      121 tataaaaaca accgtgataa caccagggtt gacaactatt tgcgcaataa tgcctttcct
      181 tcaatgatcc aggcgttcac tgccagcaac ccattcagcc gcatactgac agtgagaaac
      241 tgaaagatta ttgctgatcc ctgtggttga cgagtctttc tcttaatcga ttaaccagat
      301 tgatcgccag ccaaacaagg gcattaagca aatttatcgt cacaagcact tctcccagcc
      361 cggtactggg ttttgcaata aggatgacca ggagggtgat cagcataaat gcaatggaaa
      421 agatgatata gagagtgaaa taatccagat tattactatt gttcatgcta ctaatggcaa
      481 tcctgtcaaa actttcaaac aattatagca aacaaaataa tgaacaatag taacaagagg
      541 caacgagcta attagctgtc tataattaca ccgcactatg gccttactga tcaattttca
      601 ctcaaccaca accttcacct tcggtttaga aaggataatt ttgaccaggt cgatgtatgt
      661 aacaggttta tagaaataat aaccctgctg aaatgtgata ttattttggt tcagatagtc
      721 aagttgttct ttcgtttcga caccttcagc gacgatactg atcgaaagtt tacgcgccag
      781 atccaataca caatccagaa ttcgggttga ttctgggtct gcgtttacgc ggccaacgaa
      841 actgtgatca attttgatat aatcaatatg caggtcatga agataagaaa gccctgagta
      901 gccagtaccg aaatcatcca gcgcgatgac aaaaccattt tcatgcagaa tgttcaaccg
      961 ctgaaccaga ctttcatcaa cattcaatgg ctcacgctcg gtgacttcca gaacaaggtt
     1021 taaatcgcgg cgggtaaaac tgtcacggaa atttaaacac tcgtcgacaa acgtcggcga
     1081 aataatatgc gaagcgctaa aattaattcc aatatgaaaa ccttccggca atttactcgc
     1141 gatagcgttc atctgtctgg caacctgatt catcaggctt tgcgtaagcg gaacgattaa
     1201 tccggatttt tcagcaagtg gaataaatgc cgcgggtgat atatatccac cgtgaggttg
     1261 tttccagcgg gctaacacct caactccccg caatgtccct tcccgaccat ttaccacagg
     1321 ttggtaaaaa gggacgatct ccccattatt tattgcccgt cgcaggatct cttcaggcgt
     1381 tgcgctttta ttgaaatatc tatcaagcag gaaggcagcg gcgcaggcga ttaacagaat
     1441 aaatattaaa atcccaaagc ctttatcgat aagtctgtag aagctaaaga gtggcggcgg
     1501 gttaaagata atagtgaaat gatattttgt ggagtgaacc ttctcggtat agggataatg
     1561 tccattaagc gtcatcacat cacccgttgg tccaataatg tcatccgcca cgcgtaatac
     1621 ataccttacc cctttcaagg gtacattaag tgccccacga atatgctgat cgcttatcgt
     1681 aaccaaaatg cgcgtatctg caaattggct ctgatagagc aggataggta atctattaac
     1741 ggtgtcgatt gccggagcca acagtaaatt actgtccggg acaacaggaa tacgagacag
     1801 caggacccga ttcccaggca gggatgtaca ccagactatt ccctgtttga gaatgatgat
     1861 tgtgcgcagg tgaggtttca gagctgcttc agtgccaagc tgatattgct cctcgaggtc
     1921 gcattccttc ccggcaatgt taaccgctgt ttgagtcgcc tgtgacgctt cttcaagtat
     1981 atgattgata ttgttggcgg catatcttgc tcccgccagg tactctgctt ttgcggaata
     2041 ccagagctgg atgttcaaaa tagcgacacc ggtaataaac aagcatatcg caacgaggat
     2101 gggtatgagt gtattgcgca tttgcttgtc ccggccaaag ggtttaatac atgaaaatgc
     2161 cattcattcg ctcgcgctgg catctacaga gagcatggta gagagcataa gaaatatcca
     2221 cgccgaagat aaaattttct ccatcttgat ctaacccatt aattattgag cataatgtag
     2281 gcagtacaaa ataagttagg cgggatatca ggcgtcaaga atggagagcg agaactctcc
     2341 attcttgaca cctgatattg cggacataat aagaaagcat aacgcctgaa atgctcactt
     2401 tgtatcagca tggtgataca gctgatgttt attctaaaac cttactcaag ttctaagaga
     2461 gcacggattc cctgtcatta ata
//
LOCUS       DAPGWB010000300         2472 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.305, whole genome shotgun sequence.
ACCESSION   DAPGWB010000300 DAPGWB010000000
VERSION     DAPGWB010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.305"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..520
                     /locus_tag="RHX79_004657"
                     /pseudo
     CDS             1..520
                     /locus_tag="RHX79_004657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_047234906.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS30-like element IS30 family transposase"
     gene            complement(587..1366)
                     /gene="istB"
                     /locus_tag="RHX79_004658"
     CDS             complement(587..1366)
                     /gene="istB"
                     /locus_tag="RHX79_004658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016243248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element IS100kyp family helper ATPase
                     IstB"
                     /protein_id="HDV2199726.1"
                     /translation="MMELQHQRLMVLAGQLQLESLISAAPALSQQAVDQEWSYMDFLE
                     HLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERN
                     ENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQR
                     GVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDA
                     ALTSAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE"
     gene            complement(1366..2388)
                     /gene="istA"
                     /locus_tag="RHX79_004659"
     CDS             complement(1366..2388)
                     /gene="istA"
                     /locus_tag="RHX79_004659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element IS100 family transposase"
                     /protein_id="HDV2199727.1"
                     /translation="MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEP
                     PKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIR
                     SLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMR
                     YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFS
                     PRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVA
                     NQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDS
                     FCRGVA"
BASE COUNT          599 a          622 c          632 g          619 t
ORIGIN      
        1 taagcgggct gtagctcacc tgacactgtc tgagcgcgag gagatacgag ctggtttgtc
       61 agccaaaatg agcattcgtg cgatagctac tgcgctgaat cgcagtcctt cgacgatctc
      121 acgtgaagtt cagcgtaatc ggggcagacg ctattacaaa gctgttgatg ctaataaccg
      181 agccaacaga atggcgaaaa ggccaaaacc gtgcttactg gatcaaaatt tgccattgcg
      241 aaagcttgtt ctggaaaagc tggagatgaa atggtctcca gagcaaatat caggatggtt
      301 aaggcgaaca aaaccacgtc aaaaaacgct gcgaatatca cctgagacaa tttataaaac
      361 gctgtacttt cgtagccgtg aagcgctaca ccacctgaat atacagcatc tgcgacggtc
      421 gcatagcctt cgccatggca ggcgtcatac ccgcaaaggc gaaagaggta tgattaacat
      481 agtgaacgga acaccaattc acgaacgttc ccgaaatatc tgtcaacgac ggatgaaaag
      541 tgatccactt atatctccac caacggccca atattgatcc accgttttac tcaggattag
      601 cttctgctat aaccccggcc tttcgtttct gtctgagtcg atagctttct cctttgattt
      661 gaacgacatg tgagtggtgt aagatacggt ccagcatcgc tgaggtcagt gctgcatcac
      721 cggcgaacgt ttgatcccac tgcccgaacg gcagattgga tgtcaggatc attgcgctct
      781 tttcgtaacg tttagcgatg acctggaaga acagctttgc ttcttcctga ctgaacggca
      841 gatagcctat ttcatcaatg atgagcaggc ggggggccat tactccacgc tgaagcgtcg
      901 ttttataacg gccctgacgt tgtgccgtag ataactgaag taacagatct gctgctgttg
      961 tgaagcgaac tttgatacct gcacggactg cttcatagcc catcgctatt gccagatggg
     1021 ttttccccac acctgatggc cccagtaata cgatattttc attacgttct atgaagctga
     1081 gtgagcgtaa cgactggagt tgcttctgcg gtgctccggt ggcgaatgtg aagtcatact
     1141 cttcgaacgt tttcaccgcc gggaaggctg ccattcgggt atacatcgcc tgtttacgtt
     1201 gatgacgtgc cagtttttct tcatgaagca gatgctccag gaagtccata taactccatt
     1261 cctggtctac tgcctgttgt gacagcgcag gcgctgcgct tataaggctt tccagttgca
     1321 actgcccggc gagcaccatc agtcgttgat gttgcagttc catcatcacg ccactcctct
     1381 gcagaatgag tcgtagatgg agagtggatg atgcaggggg tgtttgtcga agttcaccag
     1441 attttcatca agatgcacgt catactcttt tttctccgga ggcagtgcca gcatggactg
     1501 ctgctcttcg agccagcgat cgcagggacg tgcctggatt gtttcatgct ttcgttggtt
     1561 agcgacatcg tgcagccagc gcagaccgtg gcggttggct gtttcaacat cgacagtgat
     1621 ccccatcggg cgcaggcgag tcattagtgg gatgtaaaaa ctgttacggg tgtactgcac
     1681 catccgttcc accttacctt tagtctgtgc cctgaagggg cgacacagtc ggggagagaa
     1741 gcccatctcc ttgccgaact gccacagcga aggatggaac cggtgctgac cggtctgata
     1801 tgcgtcacgt tgcagaacca cagttttcat attgtcatac aacacttcgc gcggcacacc
     1861 accaaagaag cggaacgcat tacgatggca ggtctccagc gtgtcataac gcatattgtc
     1921 agtgaattcg atgtacagca ttcggctgta tccgagaaca gcaacgaaca cgtgaagcgg
     1981 tgagcgacca ttacgcatag tgccccagtc aacctgcatc tgtcgtccgg gttcagtttc
     2041 gaaccgaacg gcaggctcct gctcctgagg aaccgagaga gaacgaatga atgccctgag
     2101 aatggtcatt ccgccacgat atccctggtc tctgatctcg cgagcgatta ccgttgccgg
     2161 gattttgtaa ggatgagcat cggcgatgcg ttgacgaata taatcccggt attcatccag
     2221 gagtgaagca acagcaggtc gcggcgtata ttttggcggc tcagattttg cctgcaaata
     2281 acgtttaacg gtattgcggg agatccccag ttctctggca atcgcccggc tactcattcc
     2341 ctgcttgtgc aggattttaa tttccataac tgtctcaaaa gtgaccataa gctctcctga
     2401 atcaggagag cagattaccc cctggatctg atttcaggcg ttgggtgtgg atcactattg
     2461 caccgttcgt ga
//
LOCUS       DAPGWB010000301         2430 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.306, whole genome shotgun sequence.
ACCESSION   DAPGWB010000301 DAPGWB010000000
VERSION     DAPGWB010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.306"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            428..568
                     /locus_tag="RHX79_004660"
     CDS             428..568
                     /locus_tag="RHX79_004660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004031751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199728.1"
                     /translation="MAENGYGLAGLEMGKVKSINQYRLTPGFGGFTPVPYATTECRLP
                     CR"
     gene            674..985
                     /locus_tag="RHX79_004661"
     CDS             674..985
                     /locus_tag="RHX79_004661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000483535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDV2199729.1"
                     /translation="MFNVITHPAALNELIELPDNLRGRMARLIERLEQEGNKMKMPHS
                     RVIGGGLFELRVGDKNIARTLYAYATGNEIYLLHAFVKKTQKTPTKAIEIARMRLKEM
                     K"
     gene            985..1272
                     /locus_tag="RHX79_004662"
     CDS             985..1272
                     /locus_tag="RHX79_004662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000865085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2199730.1"
                     /translation="MKVKGVPFSQVKQKLLNTPEAVKGYEDADKELEMVEMLYEMREK
                     AGLTKSALAERMGLRPSAISRLESNPLGASMKTLTKYAQACGATINIHAVY"
     gene            complement(1421..2430)
                     /locus_tag="RHX79_004663"
                     /pseudo
     CDS             complement(1421..2430)
                     /locus_tag="RHX79_004663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611435.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          635 a          621 c          564 g          610 t
ORIGIN      
        1 ttaaacacct gtttatatct cctttaaact acctaattac attcatttaa aaaaaaacct
       61 attcactgcc tgtcctgtgg acagacagat atgcacctcc caccgcaagc ggcgggcccc
      121 gatcggagcc aatttagtta caacattcaa acatagactc cggaaaaacc ccggttccgc
      181 gcagaactga aaccacaaag cccctcctca taattaataa gcgccgccgc cccggcccga
      241 agggccggaa cagagtcgct tttaattatg aatgttgtaa ctacattatc atcgctgtca
      301 gtcttctggc tggaagtatt gagtacacgc tcgtaagcgg ccctgacggc ccgctaacgc
      361 ggagatacgc cccgacttcg ggtaaaccct cgtcgggacc actccgaccg cgcacagaag
      421 ctctatcatg gctgaaaacg ggtatggctt agcagggctg gagatgggta aggtgaaatc
      481 tatcaatcag taccggctga cgccgggctt cggcggtttt actcctgtgc catatgcaac
      541 aacggaatgc cgccttccat gccgctgatg cggcatcaaa actgtactta acatgtattt
      601 catttatcag tgaaatttga tatttgcgca attttcctgt tctggtgtat tttatccttt
      661 cggaggctat aatatgttta atgtaattac tcacccggcc gcactgaatg agttgattga
      721 attaccagat aatctgcgtg gtcgcatggc taggctgatt gaacgactgg aacaagaagg
      781 taacaaaatg aaaatgcctc atagtcgtgt aattggcgga ggactttttg aactgagagt
      841 tggggataaa aatatcgcaa ggacactgta cgcttatgca actggaaacg aaatctatct
      901 gctgcatgca tttgtgaaaa agacgcaaaa gacaccaacg aaagctattg aaatcgctag
      961 gatgcgcctg aaggagatga aataatgaaa gtaaaaggtg ttccgttcag tcaggtaaag
     1021 caaaaactgc ttaatactcc agaagctgtc aaagggtatg aagatgccga taaggaactg
     1081 gagatggtag aaatgttgta cgaaatgaga gaaaaagcgg ggttaacaaa gtctgctctg
     1141 gctgaacgaa tggggttacg cccgtcagcc atcagtcgct tggaaagtaa tcctttagga
     1201 gccagtatga aaactttaac aaaatatgct caggcctgtg gtgcaaccat caatattcat
     1261 gctgtctatt gatttgcatg ttaacgatat gtatttctaa tcaaaagatt gaaaaacatc
     1321 taaaatggat gtttttcaac acataaaagt cagcgggtaa cgtcaactta agatacaacg
     1381 acagtctgaa tatcgtgggt caaggacact ggatttgccc ctatatttcc agacacctgt
     1441 tatcacttaa cccattactg gcttgctgcc gtagatattc ccgtggcgag cgataaccca
     1501 gtgcactatg cggatgccat tcgttataat gctcgaacgc ctctgcaagg ttctttgctg
     1561 ccgttaaccc gtctggtttg ggcatgacac tgatgtagtc acgctttatc gttttcacga
     1621 agctctctgc tatgccgtta ctctccggac tccgcaccgc cgtgctcttc ggttcaagcc
     1681 ccaacatccg ggcaaactgc cgtgtttcat tagcccggta gcatgaacca ttatccgtca
     1741 gccactctac tggagacgcc ggaagctcgt tgccgaagcg gcgttccacc gctcccagca
     1801 tgacgtcctg tactgtttca ctgttgaagc cgcccgtagt gaccgcccag tgcagtgcct
     1861 cacggtcaca gcagtccagc gcgaacgtga ctcgcagttt ttctccgtta tcacagcgga
     1921 actcgaaccc gtcagagcac catcgctgat tactttcttt cacagccact ctgcctgtat
     1981 gtgcccgttt cgatggcggt acagcaggtt ttcgctcaag caacagcgca ttctggcgca
     2041 tgatccggta aacacgtttg gcattgatcg caggcatacc atcaagttct gcctgtctgc
     2101 gaagcagcgc ccatacccga cgataaccat acgtgggcag ctctccgata acatggtgta
     2161 tacggagaag cacatccgta tcatcagtgt gacgactgcg gcggccatcc atccagtcat
     2221 cggttcgtct gagaatgacg tgcaactgcg cacgcgacac ccggagacaa cggctgacta
     2281 agcttactcc ccatccccgg gcaataaggg cgcgtgcgct atccactttt ttgcccgtcc
     2341 atattcaacg gcttctttga ggagttcatt ttccatcgtt ttcttgccga gcaggcgctg
     2401 aagttcttta atctgcttca tggcggcagc
//
LOCUS       DAPGWB010000302         2403 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.307, whole genome shotgun sequence.
ACCESSION   DAPGWB010000302 DAPGWB010000000
VERSION     DAPGWB010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.307"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..356)
                     /gene="quuD"
                     /locus_tag="RHX79_004664"
     CDS             complement(<1..356)
                     /gene="quuD"
                     /locus_tag="RHX79_004664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitermination protein QuuD"
                     /protein_id="HDV2199731.1"
                     /translation="MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLIPSKVKSRPQ
                     CCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKA
                     EGIIEGMLMALDIRLE"
     gene            complement(442..582)
                     /locus_tag="RHX79_004665"
     CDS             complement(442..582)
                     /locus_tag="RHX79_004665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlcG family protein"
                     /protein_id="HDV2199732.1"
                     /translation="MMFEFNMAEFLRHRWGRLRLYRFPGSVLTDYRILKNYAKTLTGA
                     GV"
     gene            complement(579..941)
                     /gene="rusA"
                     /locus_tag="RHX79_004666"
     CDS             complement(579..941)
                     /gene="rusA"
                     /locus_tag="RHX79_004666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RusA"
                     /protein_id="HDV2199733.1"
                     /translation="MNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKN
                     AMLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKM
                     PVTKGGRLELTITEMGNE"
     gene            complement(938..1228)
                     /locus_tag="RHX79_004667"
     CDS             complement(938..1228)
                     /locus_tag="RHX79_004667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1364 domain-containing protein"
                     /protein_id="HDV2199734.1"
                     /translation="MADLRKAARGRECQVRIPGVCNGNSETSVLAHIRLAGLCGTGIK
                     PPDLIATIACSACHDEIDRRTHFVDAAYAKECALEGMARTQVIWLKEGVIKA"
     gene            complement(1221..1391)
                     /locus_tag="RHX79_004668"
     CDS             complement(1221..1391)
                     /locus_tag="RHX79_004668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NinE family protein"
                     /protein_id="HDV2199735.1"
                     /translation="MATPLIRVMNGHIYRVSNRRKRKPEPKPSEIPTLLGYTASLVDK
                     KWLRLAARRNHG"
     gene            complement(1391..1846)
                     /gene="ybcN"
                     /locus_tag="RHX79_004669"
     CDS             complement(1391..1846)
                     /gene="ybcN"
                     /locus_tag="RHX79_004669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA base-flipping protein YbcN"
                     /protein_id="HDV2199736.1"
                     /translation="MNLPQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRS
                     LSQNALSHMWYSEISEYLINRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTI
                     QSLRHTSDLDTGEMYVFLCKVEAWAVNIGCHLTIPQSCEFQLLRDKQEA"
     gene            complement(1843..1944)
                     /locus_tag="RHX79_004670"
     CDS             complement(1843..1944)
                     /locus_tag="RHX79_004670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199737.1"
                     /translation="MRTYNPNSLLPSQMQRCTCDFLHPAFDLCGGEA"
     gene            complement(2043..>2403)
                     /locus_tag="RHX79_004671"
     CDS             complement(2043..>2403)
                     /locus_tag="RHX79_004671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000068668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199738.1"
                     /translation="VDLINAGLAINQHTVPDGSVGSCWARHWKAKGLATEFGERVDCE
                     HYYPEDFLQASSNPQIINAYPDSALSEFRRWFKHEYLTTKFPPYILKKSNVLPGGTED
                     ANRLIEAFKKSELENKP"
BASE COUNT          626 a          604 c          533 g          640 t
ORIGIN      
        1 atctctaacc ggatatctaa tgccattaac atcccttcaa ttatgccctc agccttctgt
       61 aaccttttcc cgatataacc atcagagcag caatgcttac ctgccagtga catgaatgtc
      121 ataccgacta cataataatc tactaataaa tcgtgcaaat cgctgttgtt ctttttcaga
      181 cgggccatgc acccgcaaat gatcatcgcg tcatcgtcac aacattgcgg gcgagatttt
      241 acttttgaag gaattaatcc cttaaaaccg gcggcaatgg acgaccaggt cacatcttca
      301 tgattattag ccgcccacgc tccccaacgc tcaagaacca tctgaatatc acgcatcaac
      361 ttactccaca aaaatcagac cagaacgcca attacaagca aaaatcaaca aaacagtatt
      421 agttgattgt tatctctgac ttcatactcc tgctcctgtc agggttttgg cgtaattctt
      481 cagtattcgg taatcggtca aaacagaacc ggggaaacga tataagcgca gacgccccca
      541 gcggtggcga agaaattctg ccatattaaa ctcaaacatc attcattccc catttcggtg
      601 atggtcagtt ccagcctccc acctttggta acaggcatct tcacaacgcg gtaatcaacg
      661 acctgagcat catccagcca gaaacctgct ttagtgaggg cgtcaaaagc ggctttttgc
      721 agattatcca ggtcacggcg acggcgatcc ggcatgtggc actcaatgcg gattttcaca
      781 ggcatagcca ggccgatatc cagcattgcg tttttaatga ttcgggcgac gttatcgcgg
      841 tatgcctgcc cctctgcgct gacgtgcgtg cgcccgcgat tatggcggta atagcgatta
      901 ttgctcggag gccagggtaa tgtgatactg taggtattca cgccttaata accccctctt
      961 tcagccagat aacctgtgtt ctcgccatac cttccagcgc gcattctttt gcatatgcag
     1021 catcgacaaa atgtgtgcgg cggtcgattt cgtcgtggca ggcagaacat gcaatggtgg
     1081 caatcaggtc tggcggtttg ataccggtac cgcacaatcc agccagccgg atatgtgcca
     1141 gtacagacgt ttcagaattg ccattacata cgccagggat tcttacctgg cattcccgac
     1201 cacgcgctgc ttttctcaaa tcagccatga ttcctccttg ctgccagtcg caaccatttt
     1261 ttatcaacca ggctagcggt atatccgagc agtgttggta tttcggatgg cttcggctca
     1321 ggcttacgct tacgacgatt tgatactctg tagatgtgtc cgttcatgac acgaataagc
     1381 ggtgtagcca ttacgcctcc tgcttgtcac ggagcagctg gaactcgcag ctctgcggaa
     1441 tagtcaggtg gcagccaata ttcaccgccc aggcttcaac cttacacagg aagacataca
     1501 tctctccggt atcaagatcg gaggtatggc gtaacgactg gatagtggtg atatcaccgg
     1561 ttacgacatc aaccaggtct ttggtttcat aaccgagata tgtgtgtttg agagcatctt
     1621 ttacccaagc tggagtggcg aacgttttac ccctgttgat gaggtattca ctgatttcgc
     1681 tgtaccacat gtggctgagt gcattctggg aaagactgcg tttctcacgc cacggtttaa
     1741 gcaccatgcg aaagcatttg ccctcctcca gataaggctg gatctgccga ccgatagcgg
     1801 tgaagttacc gcgatgtaat ttgatgccat cttgtgggag attcacgctt cacctccgca
     1861 gaggtcaaac gctggatgca aaaaatcgca ggtgcatctc tgcatctgtg aagggagaag
     1921 agagtttgga ttgtatgtgc gcataaacgt ccccgtttag cgcagaagtc accggagttg
     1981 ttcaggctcc gatgacatga ttatggcaaa atgattatgt aaaatcaaaa gccaaaaaac
     2041 aattatggtt tattttctag ctctgatttt ttgaaagctt ctatcagacg attagcatct
     2101 tctgtaccac caggaagcac gtttgatttt ttaagaatat acggtgggaa ctttgtggtt
     2161 aaatattcat gcttaaacca tctacgaaac tctgacaatg cagaatcagg ataggcatta
     2221 atgatctgag gattggaact tgcctgaaga aaatcttcag ggtaataatg ctcacagtct
     2281 actctttctc caaattctgt tgctaacccc tttgctttcc agtgacgcgc ccagcaagaa
     2341 ccaacactgc catcaggtac ggtatgctga ttaatcgcta atccagcatt gatgagatct
     2401 acc
//
LOCUS       DAPGWB010000303         2376 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.308, whole genome shotgun sequence.
ACCESSION   DAPGWB010000303 DAPGWB010000000
VERSION     DAPGWB010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.308"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(113..748)
                     /gene="msrQ"
                     /locus_tag="RHX79_004672"
     CDS             complement(113..748)
                     /gene="msrQ"
                     /locus_tag="RHX79_004672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HDV2199739.1"
                     /translation="MRLTAKQVTWLKVCLHLAGLLPFLWLVWAINHGGLGADPVKDIQ
                     HFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGV
                     NNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAIL
                     APIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV"
     gene            complement(749..1753)
                     /gene="msrP"
                     /locus_tag="RHX79_004673"
     CDS             complement(749..1753)
                     /gene="msrP"
                     /locus_tag="RHX79_004673"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDV2199740.1"
                     /translation="MKKNQFLKESDVTAESVFFMKRRQVLKALGISAAALSLPHAAHA
                     DLLSWFKGNDRPPAPAGKPLEFSKPAAWQNNLPLTPVDKVSGYNNFYEFGLDKADPAA
                     NAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFP
                     LHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLT
                     LMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYG
                     FYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYADQVASLYRGLDLRENF
                     "
     gene            complement(1862..2275)
                     /gene="hiuH"
                     /locus_tag="RHX79_004674"
     CDS             complement(1862..2275)
                     /gene="hiuH"
                     /locus_tag="RHX79_004674"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HDV2199741.1"
                     /translation="MLKRYLVLSVVTAAFSLPSLVYAAQQNILSVHILNQQTGKPAAD
                     VTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLES
                     FFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS"
BASE COUNT          621 a          573 c          580 g          602 t
ORIGIN      
        1 aatttgaggt tgatgacaaa cgaaacataa cctgatgtga tctgcgtagg ccggataggg
       61 cgctcgcgcc gcatccggca gggataacgc gtactttgtc ggcaatatga agttatacag
      121 ataatttgtt gtgaacctgc ttgcgtaacc ggttaaaaag ggaacgcaac ttcttatacc
      181 gtaaggctaa aagcagtaca gccagcccag cgtagatgag cggctgcggt gaaataatct
      241 tcactgacca cagataatgt attggggcca ggatcgcgac aagatagacg aaattatgca
      301 actgttgcca gtgcttgccg agttttcgct gcatcgcctg ggttgaagta aacgctaaag
      361 caagcaaaat tacccagctg ataataccta acgttaaata aggccgggtg attaactcct
      421 tacctaataa cgccagatta ttcacgccca gctccagcaa tgcgtaactg gttaaatgca
      481 gtgtcgccca ggcaaagcac cataagccta acaggcggcg agtgcgtatc aataacggct
      541 gttttgcgta gcgtgccaga ggtgtgatta acaaggtcgc cagcaaaaac ttcagtgcag
      601 tgcgaccggt aaaatgctga atatctttca ccggatcggc acccagtcca ccgtgattga
      661 tcgcccagac cagccagaga aacggcaaca atccggcaag atgcaggcaa actttcagcc
      721 atgtcacctg ttttgctgtc agacgcattc agaaattctc ccgcaaatcc aggccacgat
      781 acagcgatgc cacctggtcg gcgtaaccat taaacagtag cgttggctgg cgctgtacat
      841 cgaggatgcc gcctgaacca ataaatcgtt cggtagcctg tgaccagcgc gggtgatcaa
      901 catgcggatt aacgttggcg taaaaaccgt attcgtcagg cgctgccaga ttccaggtgg
      961 ttggcggacg ctcgcgggtc agcttaatac tgactatcga tttaatccct ttaaagccat
     1021 atttccacgg cacaatcagt cgtaccggcg cgccattttg tggcggtaac gccttgccat
     1081 aaacacccac ggtcatcagt gtgagcggat gcattgcttc gtcgagacgc aatccttcga
     1141 cataaggata tttcagcccg ccgccgataa agcggtcctg ctggccaggc atctgttccg
     1201 gtgcataaat tgtttcgaaa gcgacatact tcgcattgct ggtgggttcg gcaagcgcca
     1261 gcaatttgtg cagcggaaaa ccaatccacg gcaccaccat cgaccacgct tccacgcagc
     1321 gcatacgata aatacgctct tccagcggga agcgacgggt taaatcatcg tgatcgaggg
     1381 tcaatggttt tgccacttcg ccgctgattt tcagtgtcca tggatcggtt ttcaggctac
     1441 cagcattagc ggcgggatcg gctttatcca gcccgaattc atagaagttg ttataaccgg
     1501 agactttatc tactggcgtc agtggcaggt tattttgcca ggcggcaggc ttgctgaact
     1561 ccagcggttt tccggcgggg gcgggcgggc gatcgttccc tttaaaccag ctaagcagat
     1621 cggcatgcgc agcgtgaggc aaagaaagtg cagctgcgct gatgcccagt gcttttaaca
     1681 cctgtcgacg cttcataaag aataccgact cggccgtaac atctgattct tttaaaaatt
     1741 gattcttttt cataagccat cacacttttt tgtcgttagc cagcaagagc cgtttactgt
     1801 taatctgtca gggagtgtcc tccctaacag tagcagagat ctgcttttac atatttatgc
     1861 attaactgcc acgataggtt gaatacccat attggctaag taataaaggc acatgataat
     1921 gctcgttcac tttattaata tgaaattcaa cggggatctc agggaagaaa ctttcaagat
     1981 tttgtttctt gaaatagtcc ccggttttaa atacgacacg gtaatcgcca gtagtcgcag
     2041 tttgctcggg ccacagtgcc ttaattcgtc catccttatc tgttttggcg gtattaagtt
     2101 gtaaccagcc gttatccgcc ttcttttcaa gagtgactgt cacgtcagca gcgggttttc
     2161 cggtttgctg gttcaaaatg tgcacgctaa gaatgttttg ttgtgcggca taaaccaaag
     2221 aaggtaatga aaatgctgcc gttactacgg agagtactaa ataacgcttt aacatgttta
     2281 tatccttgtc atctgaatga gttttgagga tagcgaaaaa acgtccaggg taaccttaca
     2341 gcagcattac aattttgtaa tgaaccaggc tgtttc
//
LOCUS       DAPGWB010000304         2350 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.309, whole genome shotgun sequence.
ACCESSION   DAPGWB010000304 DAPGWB010000000
VERSION     DAPGWB010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.309"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            489..716
                     /locus_tag="RHX79_004675"
     CDS             489..716
                     /locus_tag="RHX79_004675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199742.1"
                     /translation="MQAAPQREETEWRVQSKRELMPAYRGEAGQQVNIKIMEYSERNV
                     RQLASNEQEEYIPRKINVGVINTPTLIRSDY"
     gene            complement(751..891)
                     /gene="ykgO"
                     /locus_tag="RHX79_004676"
     CDS             complement(751..891)
                     /gene="ykgO"
                     /locus_tag="RHX79_004676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HDV2199743.1"
                     /translation="MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKK
                     KR"
     gene            complement(891..1154)
                     /locus_tag="RHX79_004677"
     CDS             complement(891..1154)
                     /locus_tag="RHX79_004677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HDV2199744.1"
                     /translation="MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPY
                     VTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGS"
     gene            complement(1517..1618)
                     /locus_tag="RHX79_004678"
     CDS             complement(1517..1618)
                     /locus_tag="RHX79_004678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199745.1"
                     /translation="MKENKVQQISHKLINIVVFVAIVEYAYLFLHFY"
BASE COUNT          683 a          441 c          530 g          696 t
ORIGIN      
        1 cttgcatttt atattggtca ggaactttgc cctgaagtgt taggaatagt cttaatgcgc
       61 tgtgtgatgg actagtaaaa aaacaagttt taagggtaag ggatagaata taaaactata
      121 atgagctgtc attgaagatg atttgccaat cagtaagaaa ttttaatgga ttaacatgcc
      181 gcacaaaatg gttataggtg ttcattacaa taagtgatgg aaaattgaac gggcgtatgt
      241 acgtcatctg ttcggtaagc ccccaagagc cagattaagt gaagttaaac gaaggctgcc
      301 agctgtcaca ggaacgatgg cctctttgtc agggcactga gtgcagttat ctgtgcgcgt
      361 tactctaact ggcactcgaa cgtcggcgac ggggttaccg gtggatcaga ctgttcctgt
      421 ggcgtaaacg tttttatgtt agtaccaaca gatttaccac atttatcatc ttaacagttt
      481 gagtgaaaat gcaggctgcg ccgcaaaggg aggagactga gtggcgtgtt cagtctaaaa
      541 gagagttgat gccagcatac aggggcgaag ctggtcaaca agtcaacatt aagataatgg
      601 aatattcgga gagaaacgtc aggcagttgg cctcaaatga acaggaggaa tatatcccca
      661 ggaaaattaa tgttggtgtt ataaacacac caacattaat ccgatctgat tattaatcag
      721 acaaatatcg ttaatccgtc gaattttgaa tcaacgtttt ttcttacgac cctgaacggc
      781 cttaaaacgt ggattagatt tacaaatcac atataaccgt ccttttcgct tcacaatctg
      841 acagtctgga tggcgttctt ttgcggtacg cagagagtta agaactttca tcacgacccc
      901 tttttcgtgc taacaaaacg accaaaacgt tgggtgaatc gtgcaacatt tccttctgat
      961 gccactgttc tcagcttccc tgtatagaac gggtgcgatt tagaagagac atcaattgtc
     1021 acgtatggat acgttacgcc atccagctca atctcacggt ctgttttgat agtcgagccg
     1081 attttaaagt actcatcaac actggtgtcg tggaacacca cagtacgata ctcaggatgg
     1141 atattgggct tcatcatttt tacctgttat gttataacat aaccataaag atacatgctc
     1201 atccggatca tttcaacacc caatccctgt gactctttgt ggatgtggaa ttttcgcaac
     1261 ggggaactct ggcattgtta gcagccgttg gcgacgctcc cataaacgcc tggatgagtg
     1321 attgatgatg gtttcgctga gagtatggat ttttcgacaa tggaggttat ctccacttta
     1381 ctggccgatg atttatcgca gtatgattga ttacctgaca gcgtgtattc ctctcccacg
     1441 gatataataa ttacttacaa aaagggagag gatgcatatt ttaaatatca ctgaagtgaa
     1501 cagtttattg ccgttattaa tagaaatgga gaaataaata ggcgtattct acaattgcga
     1561 caaaaacaac gatattaatc agtttatgac tgatttgttg tactttattc tctttcattg
     1621 gtacttcctc gctttaaaaa agagcgcact tcgtaagtgc ccttatataa ataacgagtt
     1681 tggtcaacca attttttgac atgtatcaca aatttgaatg gatgtattac atcggctatc
     1741 ttttattgca ccaacgtcat tgatatatgt cgcctgaagt cagttccggg aatgagtttg
     1801 atctcaagac tggcccagtc cgggcgttga ttggcgctga ggagcatatc gcatctcatc
     1861 ataatgtcgt atctcctggg gtgttataca agatatcgtt gttggtgacc tgggagagga
     1921 attgagttct attaaaccgt caactatgcc ggatacatac tggattacac tgcaggcacg
     1981 ccttacgaga gaacgtgccg cagtgacggg ttaattatct gaaagaattt gcgaggctgt
     2041 atcggttact cattggtttg atagttttac tctcgggaga gtaatagata tttaattcat
     2101 taacggaaac cagtcagttc ctttcgatgc ctgaatttga tcccatagtt tatccggaat
     2161 ggttaattca tgaacaagtt gtgttatcgt tcatgagaag cataacgtaa agggaaaagc
     2221 tcgattagac ggcaggattt gtcaggggtt atgaacgaaa ttcataaatc tgtttgagtg
     2281 ttgcgatggg tagtgcaagt tcgaaatctc cgcaatttac agtccgatga aggaaaatga
     2341 atatccataa
//
LOCUS       DAPGWB010000305         2344 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.310, whole genome shotgun sequence.
ACCESSION   DAPGWB010000305 DAPGWB010000000
VERSION     DAPGWB010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.310"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            49..678
                     /locus_tag="RHX79_004679"
     CDS             49..678
                     /locus_tag="RHX79_004679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate kinase"
                     /protein_id="HDV2199746.1"
                     /translation="MCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKT
                     IERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGA
                     YDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNVDLEVACARKPDHKRE
                     SLARKIAITPQLTFGGAQLVDIDANRPLEQVLVDAEKAITDFMTARGYH"
     gene            complement(727..2226)
                     /gene="pitB"
                     /locus_tag="RHX79_004680"
     CDS             complement(727..2226)
                     /gene="pitB"
                     /locus_tag="RHX79_004680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter PitB"
                     /protein_id="HDV2199747.1"
                     /translation="MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
                     TRAMQPQLAVVMAAFFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLL
                     AAIIWNLGTWFFGLPASSSHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLI
                     VSPIVGLVIAGGLIFLLRRYWSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSA
                     AGVAFSHGANDGQKGIGLVMLVLVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQ
                     HPELPQKLIAMEPPLPAASTDGTQVTEFHCHPANTFDAIARVKTMLPGNMESYEPLSV
                     SQRSQLRRIMLCISDTSAKLAKLPGVSKEDQNLLKKLRSDMLSTIEYAPVWIIMAVAL
                     ALGIGTMIGWRRVAMTIGEKIGKRGMTYAQGMAAQMTAAVSIGLASYIGMPVSTTHVL
                     SSAVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIFLSGGLYWIALQLI"
BASE COUNT          622 a          599 c          572 g          551 t
ORIGIN      
        1 cctccattaa ttgccgttat tggtagcgat ggttcaggca agtcaacggt gtgtgaacat
       61 ctcattaccg ttgtcgaaaa atatggtgct gccgaaagag ttcatttagg aaaacaggcc
      121 ggaaatgtcg gtcgtgccgt gacaaaatta ccgttgatgg gaaaatcctt acataaaaca
      181 attgaacgaa atcaggtgaa aacagcaaaa aaattgccag gaccagttcc ggcgctggta
      241 attacagcgt ttgtcgcccg tcgcttactg cgctttcgtc atatgcttgc ctgtcgtcgt
      301 cgcgggttaa ttgttctaac cgaccgttat cctcaggacc aaattcctgg cgcttacgat
      361 ggtacggtgt tcccacctaa cgttgaaggt ggtcgttttg tctcatggct ggcaagccag
      421 gaacgtaaag cgtttcactg gatggcgagc cataagcctg atctggtcat caaactcaat
      481 gttgaccttg aagttgcctg tgcacgtaaa cccgaccata aacgggaatc gctggcgagg
      541 aagattgcca taacgccaca gttaaccttt ggtggtgcac aactggttga tatcgatgcc
      601 aatcggccac tggaacaggt gttggttgat gcagaaaaag cgattacgga ttttatgacc
      661 gcgcgtggtt atcactagtc aaaaatggaa atgcccgatc gccaggaccg ggcattttca
      721 ggaaggttaa atcaactgca atgctatcca gtacagccca ccagaaagaa aaattgccgc
      781 cggtaaagta aacacccacg ccatcaggat gctggttacc gttttacgct gtaacccacc
      841 gccgtccacc accatcgtcc ctgctaccgc agacgagagg acgtgtgttg tggagacagg
      901 catcccaata taactggcaa ggccgataga cactgccgcc gtcatttgtg ccgccatgcc
      961 ttgcgcatac gtcatgccgc gcttaccaat cttctcaccg atggtcatcg ctacacgacg
     1021 ccagccaatc atggtgccaa tgccgagcgc cagtgctacc gccatgatga tccacaccgg
     1081 agcgtactca atggtgctta acatatcgct gcgcagtttt ttcagcaggt tctggtcttc
     1141 tttactgacg cctggcagtt tcgccagctt cgcggaggta tcagagatgc acagcataat
     1201 gcggcgcagc tggctgcgct gactcacgct taacggctcg taactttcca tattgcctgg
     1261 cagcatcgtt ttaacgcgcg caatcgcatc aaaggtattt gccggatgac agtgaaactc
     1321 tgttacttgc gtgccatcag tcgatgctgc aggcaatgga ggttccatcg caatcaactt
     1381 ctgcggcagt tcaggatgct gttgcaggta gtgttcgaag ttggtaacgg catcgcgggt
     1441 acgggtaatt tcatagccgg acgcattcat attgacgacg aagccagcag gggcaatccc
     1501 caccagtacc agcattacca ggccgatccc tttttgtccg tcgttcgcgc cgtgcgaaaa
     1561 cgccacgccc gcagcggaaa caatcagcgc aatacgcgtc cagaatggcg gtttacgttt
     1621 gccttttttc tttttgcgat cttccggaat gcggtgaata cggtcacgct ttttcgtccc
     1681 gctccagtag cgtcgcagca ggaatatcag gcctcccgca atgaccaggc cgacgatagg
     1741 ggaaacaatc agcgaggaga aaattttggt cacttcacgc aggtttaacg catccatcac
     1801 cgatgagccg gttaacagcg cgttggttaa accgatgccg ataatcgcac caatcaaggt
     1861 gtgcgaactg gaggccggta aaccgaagaa ccacgttccc aggttccaga taatcgccgc
     1921 cagcagcatg gaaaagacca tcgccagacc gtgggttgac cccatattca gcaacaaatc
     1981 ggttggtaac atatggacaa tggcataggc aacgctaagt ccgcccaata acacgccaaa
     2041 aaagttaaaa aatgccgcca tcaccacagc aagttgtggt tgcatggcac gagtataaat
     2101 aacggttgcc accgcattcg ccgtgtcatg aaaaccattg attgcttcgt agaacaacac
     2161 aaatgccaga gcaagcaata acaaaagccc tgtgtatata tcaaggccaa caaataaatt
     2221 tagcatatat tagattacgc cattttgaat ttacgaacgg acgcattatc agtgacttta
     2281 acggcatggg caaagtgaaa tatcattttt taacgataaa aagagtgtta tttcttgtgt
     2341 atca
//
LOCUS       DAPGWB010000306         2332 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.311, whole genome shotgun sequence.
ACCESSION   DAPGWB010000306 DAPGWB010000000
VERSION     DAPGWB010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.311"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..874
                     /locus_tag="RHX79_004681"
     CDS             <1..874
                     /locus_tag="RHX79_004681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HDV2199748.1"
                     /translation="AAITSNGLNERGLITAGCSFLYLLIMMGLIVRAGFKVKKEQLHY
                     YQAKGIEPLSIEKLQALQLIAPYRFYHKQWSETLEFWPRKPEPGKDTFQYHVLPFDSI
                     DIISKRRESLEDQWGIEDSESYCALMEHFLSGDHGANTFKANMEEAPEQVIALLNKFA
                     VFPSDYISDCANNRSGKSSAKLIWAAELSWMISISSTAFQNGTIEEELAWHYIMLASR
                     KAHELFESEEDYQKNSLMGFLYWHICCYRRKLTDAELEACYRYDKQFWEHYSKKCRWP
                     IRNVPWGASSVKYS"
     gene            complement(991..>2332)
                     /gene="gdhA"
                     /locus_tag="RHX79_004682"
     CDS             complement(991..>2332)
                     /gene="gdhA"
                     /locus_tag="RHX79_004682"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HDV2199749.1"
                     /translation="DQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPKY
                     RQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVNL
                     SILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGAD
                     TDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFT
                     EAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKE
                     KLARLIEIKASRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQL
                     IANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLGW
                     KAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI"
BASE COUNT          593 a          585 c          569 g          585 t
ORIGIN      
        1 cgcagcgata acatccaacg gtttgaatga aagaggcctg attactgcgg gatgctcttt
       61 tctttatcta ttaattatga tggggcttat tgttcgggcc ggttttaaag taaaaaaaga
      121 acaactgcat tattatcagg ctaaaggtat tgagccgctc agtatcgaga agttacaggc
      181 gctacaattg atcgcacctt atcgattcta tcataagcaa tggtctgaaa cgctggagtt
      241 ctggccgcga aagcctgaac ctggcaaaga taccttccaa tatcatgtgc ttccttttga
      301 ctcgatcgat atcataagta aaagacgcga gtctttagag gatcaatggg gtatcgaaga
      361 tagcgaaagt tattgtgcct taatggagca ttttctttct ggcgaccatg gagccaatac
      421 ctttaaagca aacatggagg aagccccaga gcaggttatc gccttgttga ataaatttgc
      481 tgtttttccc tcagactata tctctgattg cgctaataat cgctccggta aatcctcggc
      541 gaagctaata tgggcggcgg aattatcatg gatgatctcg atatcaagca cagcttttca
      601 aaacgggaca attgaagaag aactggcctg gcattatata atgcttgctt ctcgaaaggc
      661 gcacgagttg ttcgaaagcg aagaagatta tcaaaaaaat agtctaatgg gatttcttta
      721 ctggcatatc tgctgctatc gcagaaagtt aacggatgct gaacttgaag cgtgttatcg
      781 ttacgacaag cagttttggg agcactacag taagaaatgc cgttggccca taagaaatgt
      841 tccctgggga gcatcatccg ttaaatactc ataaacgcct gaaattttgc cgggggcgct
      901 gcgcttgccc ggcctacatt agagcgtaac tgcaatgaat tgtgcccatt tgtaggcctg
      961 ataagcgtag cgccatcagg catttacaac ttaaatcaca ccctgcgcca gcatcgcatc
     1021 ggcaaccttc acaaaaccgg caatgttcgc gccctgcacg tagttggttt gctcaccttc
     1081 accaccatgc tcaacacagg catggtggat atccagcatg atgtgatgca aacgtgcgtc
     1141 aactttctcg gctttccagc ccaggcgcgc agcgttttgt gccatttcca ggcccgacgt
     1201 tgctacaccg ccagcattag ccgctttacc cggtgcaaac agtacgcctg cctgctggaa
     1261 cagttcagtc gcttcgatgg tggtcggcat atttgcccct tcagcgacgg ctttaacgcc
     1321 attggcgata agctgatgcg cggcgtcaac atccagttcg ttctgggtgg cgcaaggcag
     1381 ggcgatatca accggtacag accacggctg ttggccttcg agatagacca gaccaaattc
     1441 tttggcgtaa tctgccactc gaccatcgcg gctggctttg atttcgataa gacgtgccag
     1501 tttctctttc gtgaatccgc tttcatcaac tacagtgccg ctggagtctg acgcagtgat
     1561 cacacgagca ccaaattcca tcgctttttc gatagcgtac tgggcgacgt tgccggagcc
     1621 agaaacggaa acgcgcatcc cttcaaaacc cataccgtgg cgttttaaca ttgcttctgt
     1681 gaaataaacc agaccgtagc cggtagcttc cgggcgaata agactaccgc caaatgaaag
     1741 gcccttaccg gtgaagacgc aggcggtatt gttggagagc tttttcatca tccccgccat
     1801 aaagccgact tcacgaccac caacgccgat atcacctgcc ggaacgtcgg tatccgcgcc
     1861 cagatgacga taaagctcgg tcatcagcgc ctggcagaaa cgcatcactt cgccttcgct
     1921 tttacctttc gggtcaaaat cgctaccgcc tttaccaccg cccatcggca gggtagtcag
     1981 ggcatttttg aaggtttgtt cgaagccgag gaatttgaga atggagaggt taactgacgg
     2041 atggaagcgc ataccgcctt tgtacgggcc gatggcagag ctgaactgca cacgccatgc
     2101 acggttgacc tgtacctgat tgcgatcatc aacccatacc acgcgaaact ggatcacgcg
     2161 ctccggttca accagacgct ccagtaatga catctggcga tattttggat tttgttcaag
     2221 aaaaggccag agtgtggtca ttacttcacg aacggcttgc gcgaactcgg tttgattcgg
     2281 gtcgcgcttt tggacatggt tgaggaatga ctccagagaa tatgtctgat cc
//
LOCUS       DAPGWB010000307         2266 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.312, whole genome shotgun sequence.
ACCESSION   DAPGWB010000307 DAPGWB010000000
VERSION     DAPGWB010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.312"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>2266
                     /gene="rhsB"
                     /locus_tag="RHX79_004683"
     CDS             <1..>2266
                     /gene="rhsB"
                     /locus_tag="RHX79_004683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhs element protein RhsB"
                     /protein_id="HDV2199750.1"
                     /translation="PEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDHITITDSLDRREV
                     LHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRI
                     TTPDGRASAFYYNHHSQLTSATGPDGLEIRREYDESGRLIQETAPDGDITRYRYDNPH
                     SDLPCATDDATGSRKTMTWSRYGQLLSFTDCSGYQTRYDHDRFGQMTAVHREEGLSQY
                     RAYDSRGQLIAVKDTQGHETRYEYNAAGDLTTVIAPDGSRNGTQYDAWGKAICTTQGG
                     LTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRS
                     EDEGLVTHWHYDEADRLTHRTVNGETAEQWQYDERGWLTDISHISEGHRVTVHYGYDE
                     KGRLTGERQTVHHPQTEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGYLAG
                     MKLGDTPLVEYTRDRLHRETLRRFGRYELTTAYTPAGQLQSQHLNSLLSDRDYTWNDN
                     GELIRISSPRQTRSYSYSTTGRLTSVHTTAANLDIRIPYATDPAGNRLPDPELHPDSA
                     LSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGGIRTDDERTHRYHYDSQHRLVHY
                     TRTQYEEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT
                     IQNDRSRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPV
                     LVQMLDRLESEILAD"
BASE COUNT          536 a          706 c          691 g          333 t
ORIGIN      
        1 ccggaaatcc gttaccgtta cgacagcgac gggcgggtga cagaacagct taacccggca
       61 ggcttaagct acacgtatca gtatgagaaa gaccacatca ccatcaccga cagcctggac
      121 cgccgtgaag tgctgcacac gcagggcgaa gccgggctga agcgggtggt gaaaaaggaa
      181 cacgcggacg gcagcgtcac gcagagtcag tttgacgccg tgggcaggct cagggcacag
      241 acggatgccg caggcaggac aacagagtac agcccggatg tggtgacggg cctcatcacg
      301 cgcatcacca cgccggatgg cagggcatcg gcgttttact ataaccacca cagccagtta
      361 acgtcagcca ccgggcctga cgggctggaa atacgccggg aatatgatga atccggccgt
      421 ctgattcagg aaaccgcccc tgacggcgat atcacccgct accgttatga taatccacac
      481 agtgacctcc cctgcgcaac ggacgatgcc accggcagcc ggaaaaccat gacgtggagc
      541 cgttacggcc agttgctgag cttcaccgac tgttccggct accagacccg ttatgaccat
      601 gaccgcttcg ggcagatgac ggcggtgcac cgcgaggaag ggctgagcca gtaccgtgca
      661 tacgacagcc gtggacagtt aattgccgtg aaagacacgc agggccatga aacgcggtat
      721 gaatacaacg ccgccggtga cctgaccacc gtcattgccc cggacggcag cagaaacggg
      781 acacagtacg atgcgtgggg aaaagccatc tgtaccacgc agggcggtct gacgcgcagt
      841 atggaatacg atgctgccgg acgggtcatc cgcctgacca gtgaaaacgg cagccacacc
      901 accttccgtt acgatgtact cgaccggctg atacaggaaa ccggctttga cggccgcaca
      961 cagcgttatc accacgacct gaccggcaaa cttatccgca gcgaggatga ggggctggtc
     1021 acccactggc actatgacga agcagaccgc ctcacgcacc gcaccgtgaa tggcgaaacc
     1081 gcagagcagt ggcagtatga cgaacgcggc tggctgacag acatcagcca tatcagcgaa
     1141 gggcaccggg tgacggtgca ttacgggtat gatgagaaag gccggctgac cggtgagcgt
     1201 cagacggtgc atcacccgca gacggaagca ctgctctggc agcatgagac cagacatgcg
     1261 tacaacgcgc aggggctggc gaaccgctgt ataccggaca gcctgcccgc cgtggaatgg
     1321 ctgacctacg gcagcggtta cctggcaggc atgaaactcg gcgacacacc gctggtggag
     1381 tacacccgcg accgcctgca ccgggaaacg ctgcgccgct tcggccgtta tgaactcacc
     1441 accgcttata cccctgccgg gcagttacag agccagcacc tgaacagcct gctgtctgac
     1501 cgcgattaca cctggaacga caacggcgaa ctcatccgca tcagcagccc gcgccagacc
     1561 cggagttaca gctacagcac caccggcagg ctgaccagcg ttcacaccac cgcagcgaat
     1621 ctggatatcc gcatcccgta tgccacggac ccggcgggca accgcctgcc cgacccggag
     1681 ctgcacccgg acagcgccct cagcatgtgg ccggataacc gtatcgcccg tgacgcgcac
     1741 tatctttacc ggtatgaccg tcacggcagg ctgacagaga aaaccgacct catcccggaa
     1801 gggggtatcc gcacggatga tgagcggact caccggtacc attacgacag tcagcaccgg
     1861 ctggtgcact acacgcggac acaatatgaa gagccgctgg tcgaaagtcg ctatctttac
     1921 gacccgctgg gccgcagggt ggcaaaacgg gtgtggcggc gtgaacggga cctgacgggc
     1981 tggatgtcgc tgtcacggaa accgcaagtg acctggtacg gctgggacgg cgaccggctg
     2041 accacgatac agaacgacag gagccgcatc cagacgattt atcagccggg gagcttcacg
     2101 ccactcatca gggtcgaaac tgccaccggt gagctggcga aaacgcagcg ccgcagcctg
     2161 gcggatgccc ttcagcagtc cggcggcgaa gacggtggca gtgtggtgtt cccgccggtg
     2221 ctggtgcaga tgctcgaccg gctggaaagt gaaatcctgg ctgacc
//
LOCUS       DAPGWB010000308         2265 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.313, whole genome shotgun sequence.
ACCESSION   DAPGWB010000308 DAPGWB010000000
VERSION     DAPGWB010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.313"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>2265
                     /gene="rhsB"
                     /locus_tag="RHX79_004684"
     CDS             <1..>2265
                     /gene="rhsB"
                     /locus_tag="RHX79_004684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhs element protein RhsB"
                     /protein_id="HDV2199751.1"
                     /translation="PEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREV
                     LHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLKAQTDAAGRTTEYSPDVVTGLITRI
                     TTPDGRASAFYYNHHNQLTSATGPDGLELRREYDESGRLIQETAPDGDITRYRYDNPH
                     SDLPCATDDATGSRKTMTWSRYGQLLTFTDCSGYVTRYDHDRFGQVTAVHREEGLSQY
                     HAYDSRGQLTAVKDTQGHETRYEYNIAGDLTAVIAPDGSRNGTQYDAWGKAVRTTQGG
                     LTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRS
                     EDEGLVTHWHYDEADRLTHRTVKGETAERWRYDERGWLTDISHISEGHRVAVHYRYDE
                     KGRLTGERQTVHHPQTEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGYLAG
                     MKLGDTPLVEYTRDRLHRETLRRFGRYELTTAYTPAGQLQRQHLNSLQYDRDYTWNDN
                     GELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDST
                     LSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY
                     TRTQYEEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT
                     IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV
                     LVQMLDRLESEILAD"
BASE COUNT          541 a          699 c          684 g          341 t
ORIGIN      
        1 ccggaaatcc gttaccgtta cgacagcgac gggcgggtga cagaacagct aaacccggca
       61 ggcttaagct acacgtatca gtatgagaaa gaccgcatca ccatcaccga cagcctggac
      121 cgccgtgaag tgctgcacac gcagggcgaa gccgggctga agcgggtggt gaaaaaggaa
      181 cacgcggacg gcagcgtcac gcagagtcag tttgacgccg tgggcaggct taaggcacag
      241 acggatgccg caggcaggac aacagagtac agcccggatg tggtgacggg cctcatcacg
      301 cgcataacca cgccggatgg cagggcatcg gcgttttact ataaccacca caaccagtta
      361 acgtcagcca ccgggcctga cgggctggaa ttgcgccggg aatatgatga atccggccgt
      421 ctgattcagg aaactgcccc tgacggcgat atcacccgct accgttatga taatccacac
      481 agtgacctcc cctgcgcaac ggacgatgcc accggcagcc ggaaaaccat gacgtggagc
      541 cgttacggtc agttgctgac cttcactgac tgttccggtt atgtaacccg ctatgaccat
      601 gaccgttttg gtcaggtgac ggcggtgcac cgcgaggaag gcctgagcca gtaccacgca
      661 tacgacagcc gtggacagtt aactgcggtg aaagacacgc agggccatga aacgcggtat
      721 gaatacaaca tcgccggtga cctgaccgcc gtcattgccc cggacggcag cagaaacggg
      781 acacagtacg atgcgtgggg aaaggccgtc cgtaccacgc agggcgggct gacgcgcagt
      841 atggaatacg atgctgccgg acgggtcatc cgcctgacca gtgaaaacgg cagccacacc
      901 accttccgtt acgatgtact tgaccggctg atacaggaaa ccggctttga cggccgcaca
      961 cagcgttatc accacgacct gaccggcaaa cttatccgca gcgaggatga gggtctggtc
     1021 acccactggc actatgacga agcagaccgc ctcacgcacc gcaccgtgaa gggtgaaacc
     1081 gcagagcggt ggcggtatga cgaacgtggc tggctgacag acatcagcca tatcagcgaa
     1141 gggcaccggg tagcggtgca ttacaggtat gatgagaaag gccgcctgac cggtgagcgc
     1201 cagacggtgc atcacccgca gacggaagca ctgctctggc agcatgagac cagacatgcg
     1261 tacaacgcgc agggactggc gaaccgctgt ataccggaca gcctgcccgc cgtggaatgg
     1321 ctgacctacg gcagcggtta cctggcaggc atgaaactcg gcgacacacc gctggtggag
     1381 tacacccgcg accgcctgca ccgggaaacg ctgcgccgct tcggccgtta tgaactcacc
     1441 accgcttaca cccctgccgg gcagttacag cgtcagcacc tgaacagcct gcagtatgac
     1501 cgcgattaca cctggaacga caacggcgaa ctcatccgca tcagcagccc gcgccagacc
     1561 cggagttaca gctacagcac caccggcagg ctgaccggcg ttcacaccac cgcagcgaat
     1621 ctggatatcc gcatcccgta tgccacggac ccggcgggca accgcctgcc cgacccggag
     1681 ctgcacccgg acagcaccct cagcatgtgg ccggataacc gtatcgcccg tgacgcgcac
     1741 tatctttacc ggtatgaccg tcacggcagg ctgacagaga aaaccgacct catcccggaa
     1801 ggggttatcc gcacggatga tgagcggact caccggtacc attacgacag tcagcaccgg
     1861 ctggtgcact acacgcggac acaatatgaa gagccgctgg tcgaaagtcg ctatctttac
     1921 gacccgctgg gccgcagggt ggcaaaacgg gtatggcggc gtgaacggga cctgacgggc
     1981 tggatgtcgc tgtcacggaa accgcaagtg acctggtacg gctgggacgg cgaccggctg
     2041 accacaatac agaacgacag aacccgcatc cagacgattt atcagccggg gagcttcacg
     2101 ccactcatca gagttgaaac cgccaccggt gagctggcga aaacgcagcg ccgcagcctg
     2161 gcggataccc ttcagcagtc cggcggcgaa gacggtggca gtgtggtgtt cccgccggtg
     2221 ctggtgcaga tgctcgaccg gctggaaagt gaaatcctgg ctgac
//
LOCUS       DAPGWB010000309         2218 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.314, whole genome shotgun sequence.
ACCESSION   DAPGWB010000309 DAPGWB010000000
VERSION     DAPGWB010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.314"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..657)
                     /gene="traK"
                     /locus_tag="RHX79_004685"
     CDS             complement(<1..657)
                     /gene="traK"
                     /locus_tag="RHX79_004685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003982266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system secretin
                     TraK"
                     /protein_id="HDV2199752.1"
                     /translation="MFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFT
                     VPGDRIIAVNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREG
                     AGRTIQLVSDLRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQ
                     APAGLSSVADSVWTGNHLKMVRFVVENKTLSALNIRESDFWQPGTRAVMFSQPASQLL
                     A"
     gene            complement(668..1234)
                     /gene="traE"
                     /locus_tag="RHX79_004686"
     CDS             complement(668..1234)
                     /gene="traE"
                     /locus_tag="RHX79_004686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system protein
                     TraE"
                     /protein_id="HDV2199753.1"
                     /translation="MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNE
                     QRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETADASHQALLQYIRP
                     GAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTD
                     IKHYILILKRENGVTWLDNFGETDDEKK"
     gene            complement(1256..1567)
                     /gene="traL"
                     /locus_tag="RHX79_004687"
     CDS             complement(1256..1567)
                     /gene="traL"
                     /locus_tag="RHX79_004687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system protein
                     TraL"
                     /protein_id="HDV2199754.1"
                     /translation="MSGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAICIGWGITT
                     SKYLFGIGAAVLVYFGIKKLKKGRGSSWLRDLIYWYMPTALLRGIFHNVPDSCFRQWI
                     K"
     gene            complement(1582..1947)
                     /gene="traA"
                     /locus_tag="RHX79_004688"
     CDS             complement(1582..1947)
                     /gene="traA"
                     /locus_tag="RHX79_004688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001401864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system pilin TraA"
                     /protein_id="HDV2199755.1"
                     /translation="MDAVLSVQGVSAPVKKKSFFSKFTRLNMLRLARAVIPAAVLMMF
                     FPQLAMAAGSSGQDLMASGNTTVKATFGKDSSVVKWVVLAEVLVGAVMYMMTKNVKFL
                     AGFAIISVFIAVGMAVVGL"
     gene            complement(1990..2205)
                     /gene="traY"
                     /locus_tag="RHX79_004689"
     CDS             complement(1990..2205)
                     /gene="traY"
                     /locus_tag="RHX79_004689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000086381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer relaxosome protein TraY"
                     /protein_id="HDV2199756.1"
                     /translation="MSRGRTRAAPGNKVLLILDETTNQKLLAARDRSGRTKTNEVFIR
                     LKDHLNRFPDFYNASLVKEEAESIDDI"
BASE COUNT          567 a          579 c          519 g          553 t
ORIGIN      
        1 tgccagtaac tggctggcag gctggctgaa catcacggca cgggttcccg gctgccagaa
       61 atcactttcc cggatattca gggcagacag cgttttattt tccacgacaa agcggaccat
      121 cttcaggtga ttccccgtcc atacggaatc tgccactgaa gacagccccg ccggggcctg
      181 cagggtttcc tttgtcacag gaacctgata ccagcctgca ggtaattttc cgccacggac
      241 agcctggctg atggtcacaa gcagggattc gtaaggcgtg gacgtttccc acgctccggc
      301 ttcttctccg gttccgcgca ggtcactgac cagctgaatg gtacgccccg cgccttcacg
      361 gggaacagcc tgaatggaaa ggttcagacc acgctctgtt tccagaatga acgtaaaggg
      421 ctttttgttg acggtggcca ccaccacacc gccggaggcg gtctgctcat tattggtcag
      481 ggcaccatcc agactgttca cggcgataat ccggtcaccg ggaacggtaa acagattcgg
      541 gctggtattg ctgatggcaa tactggcctg accaccgttc accattggca ccacggtggg
      601 ggccagcgta ccgtttgcgg ccatcacgct gcaggaaaaa aacaggctgc cgaatattat
      661 tgccgtatta ttttttctca tcgtctgttt ccccgaaatt atccagccag gtcaccccgt
      721 tttcccgctt cagaataagg atgtaatgtt tgatatcagt gaaaggtttt gaatcaccaa
      781 tccaggtttt aagcacacct cgaatttcca cacggccata ctgaggccag acacgaacac
      841 tggtctggaa aaaggctgag ttcacgttat cgtttttaat acgcttcgct tcttcagcca
      901 gaataacttt catctggttc tgtgcgcccg ggcggatata ttgcagaagc gcctgatgtg
      961 aggcatcggc ggtttctgat gaaacattca gacggagggc aataaatgac agcgccatct
     1021 gctgtaaata agaggcgtcg gcactgttct gtgacacggc aaagggggca ttaaatgcca
     1081 ttggcgtcac ggcagtgcgt tgctcattct gaagacggta gttattcacc ccctgaatga
     1141 cgttaacaga gaggctgaga acaataagca ctgacataaa tataaaggcg atggccatta
     1201 cacgactggt acttaaacgg gcaccgtgtt ccatataaca atcctggtat cagttctatt
     1261 taatccactg ccggaaacac gaatcgggaa cattatgaaa aataccgcgc agcagggctg
     1321 ttggcatata ccagtaaatc aggtcacgta accaggaact gccccgccct tttttcagtt
     1381 ttttaatccc gaaataaacc agaaccgctg caccaatacc gaacagatat ttcgatgttg
     1441 tgatacccca gccaatacag attgctgcgg ggatcagttc atccagtggc aggccaaacc
     1501 agcggctctg gttggtcagt gtttccggga aacgatattt cttaagttta ttctcgtctc
     1561 ccgacatcgt tttatttcct gtcagaggcc aacgacggcc atacccacag caataaatac
     1621 agagatgatg gcaaaaccgg ccaggaactt gacgtttttg gtcatcatgt acatgaccgc
     1681 accgaccaga acttcagcca gaacaaccca tttaacaaca ctggagtcct taccgaaggt
     1741 cgccttaacc gtggtgttac cacttgccat caggtcctga ccactgctgc cggcggccat
     1801 cgccagctgc gggaagaaca tcatcagaac agcagccggg atcacagcgc gagccaggcg
     1861 aagcatattc agacgagtga atttagaaaa aaacgacttc tttttgacgg gcgcagaaac
     1921 accctgaaca cttaaaacgg cgtccatatg attcctctgt ttaatattga tagtgaaaaa
     1981 taaaactctt tatatatcgt ctatgctttc agcttcctcc tttactaaag atgcattata
     2041 aaagtctgga aaacgattga gatgatcttt tagtctaatg aacacctcat tagtttttgt
     2101 tcttccgcta cgatctctag ctgctaaaag tttctgattg gttgtctcat ccagtattaa
     2161 taagactttg ttacccggtg cggctctggt tctccctctg ctcacgtttc ctccgcat
//
LOCUS       DAPGWB010000310         2215 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.315, whole genome shotgun sequence.
ACCESSION   DAPGWB010000310 DAPGWB010000000
VERSION     DAPGWB010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.315"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            15..311
                     /locus_tag="RHX79_004690"
     CDS             15..311
                     /locus_tag="RHX79_004690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001545326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199757.1"
                     /translation="MSAFSFNTTYQPTGDQQKDAIAQIGIMQNRAVQANLAYQSCRDS
                     GALFKVLHQVNNELHDLLDSLENHTPLVRKNADELIALLLLFTRQVGQSRTDLI"
     gene            421..1242
                     /locus_tag="RHX79_004691"
     CDS             421..1242
                     /locus_tag="RHX79_004691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001234456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 domain-containing protein"
                     /protein_id="HDV2199758.1"
                     /translation="MRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSERY
                     TYIPTINIINKLRDEGFQPFFACQSRVRDLGRREYSKHMLRLRREGHINGKEVPEIIL
                     LNSHDGSSSYQMIPGIFRFVCTNGLVCGNNFGEIRVPHKGDIVGQVIEGAYEVLGVFD
                     KVTDNMEAMKEIHLNSDEQHLFGRAALMVRYEDENKTPVTPEQIITPRRREDKQNDLW
                     TTWQRVQENMIKGGLSGRSASGKNTRTRAITGIDGDIRINKALWVIAEQFRKWKS"
     gene            complement(1538..2140)
                     /locus_tag="RHX79_004692"
     CDS             complement(1538..2140)
                     /locus_tag="RHX79_004692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000243715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDV2199759.1"
                     /translation="MVLLVVRTTNLLSLFVEWVKLFTDKVTRGGKMKKWMLVICLMFI
                     NGICEAADCFDLAGRDYKIDPDLLRAISWKESRYRVNAIGINPVTGYGSGLMQVDSQH
                     FNELARYGIKPEHLTTDPCMNIYTGAYYLAIAFKKWGVSWEAVGAYNAGFRKTERQNQ
                     RRLAYASEVYRIYTWIKSSKGIRVPTTKKSLSQINSVQNN"
BASE COUNT          600 a          471 c          503 g          641 t
ORIGIN      
        1 atacaggagg aattatgagc gcattttctt ttaacaccac ttatcagcca acaggcgatc
       61 agcagaaaga cgcaatcgca caaatcggga tcatgcagaa tcgtgctgtt caggcaaatc
      121 ttgcatatca gagctgccgg gattctggtg cactctttaa ggtgctccac caggtcaata
      181 atgagctgca tgacttactg gatagcctgg agaatcatac tcctcttgtc agaaaaaacg
      241 ctgatgagtt gatcgcgctg ttactgcttt tcactcggca ggttggtcag tcccgaactg
      301 acctgatttg atggtccttc ccctcgggat tgttgtcttt ttgttaacga taaccgaggg
      361 ggatgatatt aagcgaaaaa aattttatta attttatgcc ttcataaagg agttactgtt
      421 atgcgattag cttcccgttt tggtcgatat aattctattc gccgtgagcg cccgttaacg
      481 gatgacgaat taatgcagtt tgttccatct gtcttttctg gtgataaaca tgaatcccgg
      541 agtgagcgtt atacatatat cccaaccatc aatatcatca ataagttacg tgatgaaggt
      601 ttccagccgt tctttgcctg tcagagtcgg gttcgtgatt tgggacgccg cgaatacagt
      661 aaacatatgt tacgtcttcg cagggaaggg catattaacg ggaaagaagt tcctgaaatt
      721 atcctgctta attcacatga tggttcatcc agttatcaga tgatccccgg aatttttcgt
      781 tttgtctgca caaatggcct ggtgtgcgga aataattttg gcgaaatccg tgttccacat
      841 aaaggtgata ttgtcgggca ggttatcgag ggagcgtatg aagtgctcgg tgtctttgat
      901 aaggtcactg ataatatgga ggcgatgaaa gaaattcatc ttaacagtga cgagcaacat
      961 ttatttggca gagctgcact gatggtcagg tatgaagatg aaaataaaac gccagtgacg
     1021 cctgaacaaa taattactcc ccgtcgtcgg gaagataaac agaacgatct ctggacaacc
     1081 tggcagcggg ttcaggagaa tatgataaaa ggtggattat cggggcgaag tgcctccggg
     1141 aaaaatacca ggacaagagc cattacaggt attgatggtg atataagaat caacaaggcg
     1201 ttatgggtga ttgccgaaca gttcagaaag tggaagtcat gataatataa gtaaagcccc
     1261 gaaaattttt cggggcttta cttatattat cattcttcgg catcgctgtg tcgtctgata
     1321 tacctcaatt ccatcaaccg gctttccggt tgtctgtaaa tattgtgccc gcgaaaaatg
     1381 gtctggcagg aggctgcgca gttaccggat atatataaga tggggtcccg ctttgcgggg
     1441 cttcggccag tcagcattat cactcatatg atatttttgt gtgtggcctt ccatgccgct
     1501 gtcgcggcat aaccggtatt tgacaatgta tacaatatta attgttctgc acactgttaa
     1561 tttgggaaag tgatttcttc gtggtcggaa cccggatgcc tttactgctc tttatccagg
     1621 tataaatccg gtaaacctct gatgcgtagg caagacgtct ctggttctgg cgttcggtct
     1681 tcctgaatcc ggcattgtat gcaccaacgg cctcccagga gacgccccat tttttaaagg
     1741 ctattgccag ataataagca ccggtataaa tgttcatgca gggatctgtt gtcagatgtt
     1801 ccggcttaat tccatagcgg gccagttcgt taaaatgctg ggaatctacc tgcataagtc
     1861 cgctgccata tcccgttacc ggattaatac cgatggcatt aacccggtaa cgggattctt
     1921 tccatgatat cgctctcagt aaatccgggt ctattttgta atcccgacct gcaagatcaa
     1981 agcaatcggc ggcttcgcag atcccattta taaacatcag gcagattact aacatccatt
     2041 ttttcatttt tccacctctg gtgactttat ccgtaaataa tttaacccac tccacaaaaa
     2101 ggctcaacag gttggtggtt ctcaccacca aaagcaccac acactacgca aaaacaagtt
     2161 tttgctgatt tacgttttaa atcatgtaat taacaaacgc tatttatatt taata
//
LOCUS       DAPGWB010000311         2212 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.316, whole genome shotgun sequence.
ACCESSION   DAPGWB010000311 DAPGWB010000000
VERSION     DAPGWB010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.316"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            88..420
                     /gene="hdeA"
                     /locus_tag="RHX79_004693"
     CDS             88..420
                     /gene="hdeA"
                     /locus_tag="RHX79_004693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeA"
                     /protein_id="HDV2199760.1"
                     /translation="MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLA
                     VDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE
                     WDKIKKDM"
     gene            536..862
                     /gene="hdeB"
                     /locus_tag="RHX79_004694"
     CDS             536..862
                     /gene="hdeB"
                     /locus_tag="RHX79_004694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeB"
                     /protein_id="HDV2199761.1"
                     /translation="MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFID
                     LNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQA
                     SNDLPN"
     gene            926..1573
                     /locus_tag="RHX79_004695"
     CDS             926..1573
                     /locus_tag="RHX79_004695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HDV2199762.1"
                     /translation="MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSAL
                     FMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIW
                     VTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSML
                     DWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS"
     gene            complement(1615..2145)
                     /locus_tag="RHX79_004696"
     CDS             complement(1615..2145)
                     /locus_tag="RHX79_004696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2199763.1"
                     /translation="MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVI
                     IDTLMNNVFHSNFLTQIERLKPVHVIIFSPFNIKRCLGKVPVTFVPRTITIIDFVALI
                     NGSYCSVPEAAVSLSRKQHQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNL
                     KRINELVRHQHIDYLV"
BASE COUNT          656 a          432 c          501 g          623 t
ORIGIN      
        1 catgacatat acagaaaacc aggttataac ctcagtgtcg aaattgattc gtgacggctc
       61 tttcacttta tagttgagga tattacgatg aaaaaagtat taggcgttat tcttggtggt
      121 ctgcttcttc tgccagttgt gagcaatgca gcggatgcgc aaaaagcagc tgataacaaa
      181 aaaccggtca actcctggac ctgtgaagat ttcctggctg tggacgaatc cttccagcca
      241 actgcagttg gttttgctga agcgctgaac aacaaagata aaccagaaga tgcggtttta
      301 gatgttcagg gtattgcaac cgtaacccca gctatcgttc aggcttgtac tcaggataaa
      361 caagccaact ttaaagataa agttaaaggc gaatgggaca aaattaagaa agatatgtaa
      421 ttccgggaat gcgttacatc gtacttcctt gcatattgaa caggccggaa tatcttcttt
      481 aaaagcagct attcctcctg ttcatatata atctctatat tgaatgggtt acaaaatgaa
      541 tatttcatct ctccgtaaag cgtttatttt tatgggcgct gtagcggctt tgtcactggt
      601 gaacgcacaa tctgcgctgg cagccaatga atccgctaaa gatatgacct gccaggaatt
      661 tattgatctg aatccaaaag caatgacccc ggttgcatgg tggatgctgc atgaagaaac
      721 agtatataaa ggtggcgata ccgttacttt aaatgaaacc gatctcactc aaattcctaa
      781 agtgatcgaa tactgtaaga aaaacccgca gaaaaatttg tataccttca aaaatcaagc
      841 atctaatgac ttgccgaatt aatgaggtac aagtaaaaag gagtagcaag ttgagccatc
      901 ttgctgctcc tttttgcatt tttatatgac agcagaattt attatacgtc ttatactcgc
      961 ggcaattgcc tgtggcgcta ttggcatgga aaggcaaatg cgcggcaaag gagcagggtt
     1021 acgcacacat gtattaattg gcatgggaag cgccctgttt atgattgttt cgaaatatgg
     1081 ttttgctgac gtgctgtctt tagatcacgt cggactcgac cccagccgta ttgctgctca
     1141 ggtggtgacg ggcgtcgggt ttatcggtgc aggtaacatt ctcgttcgta accaaaatat
     1201 tgtaggtctg acgacggcag cggatatctg ggtgaccgcc gccataggta tggttattgg
     1261 cagcggtatg tacgaactgg gtatttatgg ttcagtgatg accttgttgg tgctggaagt
     1321 cttccatcaa ttaaccttcc gcctgatgaa caaaaattac catttacagc tgacattagt
     1381 gaacggtaat acggtatcaa tgctcgactg gtttaagcag caaaaaataa aaacggattt
     1441 agtttcgttg caggaaaatg aagatcatga agtggtcgcc attgatatcc agcttcatgc
     1501 cacaacgtcg atagaagacc tgttgcgatt attaaaaggt atggcagggg tgaaaggcgt
     1561 ttcaattagc taatctgtgt ggcagcgtag ccagactcac cgtaagcctg aaattcacac
     1621 cagataatca atatgctgat ggcgtaccag ctcattgatc cgcttaagat tgaggatcat
     1681 catgatattg tgtttatggc agtagaacgt ttttagcgat attttcagtt tctccagaat
     1741 atcttccgtt gtcatttgat tcgcaatgca gctcagaacc tgatgttgct tgcgcgaaag
     1801 tgacacagcc gcttcaggca cagagcagta actgccattg atgagtgcga caaaatcaat
     1861 gatagtgata gtccgcggaa caaaggtcac cggcactttc cccaggcagc gtttaatatt
     1921 aaagggggag aaaataatca catggacagg ttttaatcgt tcaatttgag tgagaaaatt
     1981 agaatgaaat acattattca ttaatgtatc aataatgacg aaggcattct gatgcaacat
     2041 tacgtcgatc tcttcttcgt tctgtatatg aacgacatta cctttactca gaatgttttt
     2101 catcgcggtg aagaacatcg tatccctggt aattataaga aacataaccg actcctggtg
     2161 cggacattaa ctttataatc agtttgccaa aggtaattaa caggacaggg ct
//
LOCUS       DAPGWB010000312         2203 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.317, whole genome shotgun sequence.
ACCESSION   DAPGWB010000312 DAPGWB010000000
VERSION     DAPGWB010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.317"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            20..493
                     /locus_tag="RHX79_004697"
     CDS             20..493
                     /locus_tag="RHX79_004697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005012880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV2199764.1"
                     /translation="MRRLTQQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQV
                     YSQPGHAYWVVEYDGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMA
                     MEQAREMGFKRCYLETTAFLKEAIGLYEHLGFQHIDYALGCTGHVDCEVRMLREL"
     gene            complement(539..955)
                     /gene="rraB"
                     /locus_tag="RHX79_004698"
     CDS             complement(539..955)
                     /gene="rraB"
                     /locus_tag="RHX79_004698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HDV2199765.1"
                     /translation="MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLE
                     TLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAE
                     KFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH"
     gene            1117..2121
                     /gene="argF"
                     /locus_tag="RHX79_004699"
     CDS             1117..2121
                     /gene="argF"
                     /locus_tag="RHX79_004699"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDV2199766.1"
                     /translation="MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLT
                     GKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYD
                     GIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLV
                     YAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED
                     VAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLP
                     AFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
                     "
BASE COUNT          556 a          534 c          561 g          552 t
ORIGIN      
        1 tgcgccgcaa tcacctgtaa tgcgtcgcct gacgcagcag gataatcccg ccatcgcccg
       61 cgtcattcgt caggtatccg ccgaatacgg tcttaccgct gataaaggct acaccgtcgc
      121 cgatccgaac ctggacgagt tgtatcaagt gtatagtcag ccgggtcatg catattgggt
      181 ggttgagtac gatggtgaag tggtcggcgg cggtgggatt gcgccattaa ccgggagtga
      241 gtcggacatt tgcgaactgc agaagatgta ttttcttccg gctattcgcg gtaaagggct
      301 ggcgaaaaaa ctggccttaa tggcgatgga gcaggcacga gagatgggct tcaaacgctg
      361 ctatctggaa acgaccgctt ttttgaaaga agcgattggt ttgtatgaac atttaggttt
      421 tcaacatatc gactatgcac ttggctgcac gggccatgta gattgtgaag tgcggatgct
      481 acgcgaactc taaaaaaatg cccgctagtg tgtgctatcg ggcattttaa tcaattaatt
      541 agtggcgaac cccgtcatcg tcttcatcga caaaatcttc atcgtcgccg tcttcgccat
      601 tgggatcttc aaagtaagtg ccccaaccgt cgtactcaac gtcaaatttc tccgccagcg
      661 tcatcagttg ttcaacctgg gcatcgatca gatcggcatt caacgcgcac tcgctgagga
      721 tgtcgcagca aatcacgata tcaccatctt caacttccag ctcttctgga tcggtcactt
      781 cgtaaccgag tttaaacgct tcaactgctg ctttttccag ggtttccaga tcgtctgcgg
      841 aaagatggtg ttcgatggtg tacagcgcgt ccggatcgct gccatcttcc agtaattctt
      901 caataatcaa acgtgtttct tcacgctgtt cttccagttg ttccgggttt gccatggctc
      961 attcctctta atgtcctgcc gatactctta ttgtcacaca ccactgacat tgcctccacc
     1021 tttgtgacaa agatttatgc tttagacttg caaatgaata atcatccata taaattgaat
     1081 tttaattcat taaggcgtta gccacaggag ggatctatgt ccgggtttta tcataagcat
     1141 ttcctgaaat tactcgattt cacgccagct gaactcaaca gcctgctgca gttagccgcg
     1201 aagctgaaag ccgataagaa aagcggcaaa gaagaagcca aactcactgg taaaaacatc
     1261 gcgctcatct tcgaaaaaga ctcgacccgt acccgatgct ctttcgaagt tgccgcatat
     1321 gaccagggtg ctcgcgttac ttatctcggc ccaagcggca gtcagattgg tcataaagag
     1381 tcgattaaag acactgcccg cgtgctgggt cgcatgtatg acggtattca gtatcgcggc
     1441 tatggtcagg agattgtcga aacactggcg gaatacgctg gcgtgccggt atggaacggc
     1501 ctgaccaatg agtttcaccc cacgcagttg ctggcggatc tcctcaccat gcaggagcat
     1561 ttacccggta aagcattcaa cgaaatgacg ctggtctatg caggtgacgc acgtaacaac
     1621 atgggcaatt cgatgctcga agctgcggcg cttaccggtc tggatttgcg tctggtcgcg
     1681 ccacaggcat gctggccgga agctgcgctg gttacggaat gccgcgccct ggcacagcaa
     1741 aatggcggga atattacgct gacggaagat gtagccaaag gagttgaagg tgctgacttt
     1801 atctataccg atgtatgggt gtcgatgggg gaagcaaaag agaaatgggc agaacggatt
     1861 gcattactgc gtgattatca ggtgaacagc aagatgatgc agttgaccgg taacccggag
     1921 gtcaaattcc tccactgcct gcccgcgttt catgacgacc agacgacgct tggtaagaaa
     1981 atggcggaag agtttggcct acatggcgga atggaagtga ctgatgaggt cttcgaatct
     2041 gccgccagca ttgtttttga tcaggcggaa aaccgcatgc ataccatcaa agcggtgatg
     2101 gtcgcgacgc tcagtaaata attgatatcg ctataaagat gccgggaaat acaaaaacat
     2161 cccggcatca cattatttta tgcagtaata gttcaattat tcc
//
LOCUS       DAPGWB010000313         2184 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.318, whole genome shotgun sequence.
ACCESSION   DAPGWB010000313 DAPGWB010000000
VERSION     DAPGWB010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2184)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2184)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.318"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..2127)
                     /locus_tag="RHX79_004700"
     CDS             complement(<1..2127)
                     /locus_tag="RHX79_004700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDV2199767.1"
                     /translation="MQTVFGGGSVSGTLINTGEQQVSSGGSAVDTTIEGGLQTVFGGG
                     SVSGTLINNGEQRVSSGGSAIDTTINNGGTMSIAAGGSGTGIIQNNGGAIRANTSAIL
                     SGTNVNGSFSITNGSARNMLLENGGLLMVLQGHQAIDTQVSKGGELQVESGSELLGTT
                     LIKDDGKLSGNQITNNGVLHFLDNSSANYSGTLDGTGSLNLNGGKLTLSGNFSQDSGI
                     FIQNHGTMIMDNLRAMANVTIEPDATLRLENGSLLAGRITGDGKKGGNLIVADSVWKL
                     SGDSTINSLDMSNGTVDFHSIQSPQFKTKLEGVTLNIGQLSGNGTFLMNTDIASYTGD
                     KLNITGDANGNFVLNIKNTGQEPVSPGNPLPVVYTGGGDAVFTVNGGKVDAGVWEYYL
                     SKDNTNWYLKSDTTQPGNPEPGIPNPPVRHTTKSTDAVLNMASAPTYIFNSELQGLRF
                     RNSEKSENSRTSGGVWGHYIGSDKHISSKGAGYSLTQYGIVTGGDKRFDLSDGVLSLG
                     AFVSFSDNNIRHNRGGKSSIDSKSVGLYMTYDTHGYYIDGVLKFNRFKNELRTHMSDG
                     TMVSGDYHQNGFGGSLEVGKYFSLNENTWLLPYARTTALAVNDDNISLSNGMKAEINT
                     THSFQGEVGVNLGMDLDVGKTKIRPYLTAGVSHEFSNHNKVKINKAYDFTNDISGTTG
                     KYGLGMDVQLTSNASIWGEANYLKGNN"
BASE COUNT          565 a          555 c          402 g          662 t
ORIGIN      
        1 attgttacct tttaaataat tagcctctcc ccatatactg gcatttgatg ttagctgaac
       61 atccataccc aaaccgtact ttccggttgt cccggatatg tcgttagtaa aatcataggc
      121 tttattgatt ttaaccttat tatgatttga aaattcatga ctgactcctg cggtcaggta
      181 gggccttatt ttggttttac caacatcaag gtccatccct aaattaacac caacctcacc
      241 ctggaaagaa tgtgttgtgt ttatttcagc cttcattcca ttagatagac tgatattgtc
      301 atcattcaca gcaagagctg ttgttcgggc ataaggaagt aaccaggtat tctcattcag
      361 agaaaaatac ttgcccacct ccaggctacc accgaaacca ttttgatgat aatctcccga
      421 aaccatagtt ccatcactca tatgggtacg caactcattt ttgaaacggt tgaatttgag
      481 tacaccatct atatagtatc cgtgagtatc atacgtcatg tacaagccaa cacttttact
      541 atcaatagaa cttttccctc ctcgattatg cctgatattg ttatcagaga aggaaacaaa
      601 tgcccctaat gacaacaccc catcgcttag gtcaaaacgc ttatctccgc ccgtcactat
      661 tccgtattgg gtcagggagt aacccgctcc tttgctgctg atgtgtttat ctgatcctat
      721 atagtgcccc catactcccc cagaagtacg tgagttttct gatttttcac tgttacggaa
      781 tcgcagccct tgtaattcac tgttaaagat atatgtcgga gcgcttgcca tattcagtac
      841 agcatcagta gactttgtgg tgtgccgtac tggaggattg ggtatacccg gttccggatt
      901 acctggttgt gtagtatcag attttagata ccagttagta ttatctttac tcagataata
      961 ttcccaaact cctgcatcca cttttcctcc gtttactgta aatacagcat ctcctccacc
     1021 ggtataaacc actggtaatg ggttacccgg ggatacaggc tcctgaccgg tatttttgat
     1081 attcaaaaca aaattaccgt ttgcatcccc tgtgatgttt aatttatcac cagtatatga
     1141 tgcaatatcg gtattcatca agaaggtgcc atttcctgat aactgtccga tatttaacgt
     1201 tactccctca agttttgttt taaactgagg ggactgtatt gaatgaaaat ccacggttcc
     1261 attactcatg tctaatgagt taatagtaga gtctccggat aatttccaga cagagtcagc
     1321 cactatcaga tttccacctt tcttcccatc cccagtaatg cgtccagcca ggaggctacc
     1381 attctctaag cgcagagttg catcaggctc gattgtcaca tttgccatag cccgtagatt
     1441 atccattatc attgttccat gattttggat aaaaataccg ctatcctgag aaaaattacc
     1501 actgagagtt aattttcccc cattcagatt cagactaccg gtaccatcca gtgtgccgct
     1561 atagtttgct gaactattgt cgagaaagtg cagaacccca ttattggtta tctggttgcc
     1621 agacagtttg ccatcgtctt taatcaaggt tgtacccaat agctcagaac cgctctcaac
     1681 ctgtaattca ccacctttag atacctgggt atctatagcc tgatggcctt gcagaaccat
     1741 caggagtcca ccattttcta acaacatatt tctggcgcta ccattagtaa tgctgaagct
     1801 accatttacg ttcgttccac tcaggatggc cgatgtgttc gctctgatag cgccaccatt
     1861 gttttgaatt attcccgttc cactaccacc tgcggcaata ctcattgtcc ctccattgtt
     1921 aatggttgtg tcaatagcac tgccaccact ggagactcgc tgctccccgt tattaatgag
     1981 agtcccggag acacttccgc caccgaaaac agtctgcagt cccccctcaa tggtggtgtc
     2041 cacggcactg ccaccgctgg aaacttgctg ttccccggta ttaatgagag ttccggagac
     2101 acttccacca ccgaaaacag tctgcagtcc cccattaatg gtggtgccta cagcactacc
     2161 actgcgggaa acttgctgtt cccc
//
LOCUS       DAPGWB010000314         2162 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.319, whole genome shotgun sequence.
ACCESSION   DAPGWB010000314 DAPGWB010000000
VERSION     DAPGWB010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.319"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            95..310
                     /gene="essD"
                     /locus_tag="RHX79_004701"
     CDS             95..310
                     /gene="essD"
                     /locus_tag="RHX79_004701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416074.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage lysis protein EssD"
                     /protein_id="HDV2199768.1"
                     /translation="MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGS
                     LVFGLLTYLTNLYFKIKEDRRKAARGE"
     gene            315..866
                     /locus_tag="RHX79_004702"
     CDS             315..866
                     /locus_tag="RHX79_004702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000189902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdfR family protein"
                     /protein_id="HDV2199769.1"
                     /translation="MTQNYELIVKGIRNFENKVTVTLALQDKERFDGEIFDLDISLDR
                     VEGAALEFYEAAARMSIRQVFLDVAAGLCEGDEQSPEKRPIILEAQNVWITYKGKLPG
                     RITGSLKTPPTALRSEKDDIESPIEKLEGSVADLNKKLSVLIPSEDEKKRRDEQFAAF
                     YDYCIEVTRRNFVKIFEEGKSLQ"
     gene            complement(814..1074)
                     /locus_tag="RHX79_004703"
     CDS             complement(814..1074)
                     /locus_tag="RHX79_004703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001306174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199770.1"
                     /translation="MDYTNLPKQTFADLIALRQAVVALINLLPEKEKELVKALLNRTA
                     ADFSSYPLTDDLADLPELIAASAIKLTEEIYPPQKSSQNSCE"
     gene            1188..1721
                     /locus_tag="RHX79_004704"
     CDS             1188..1721
                     /locus_tag="RHX79_004704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDV2199771.1"
                     /translation="MNVKIRYSLSAAVLALIAASAPAPDILDQFLDEKEGNHTTAYRD
                     GSGIWTICRGATMVDGKPVIPGMKLSKEKCAQVNAIERDKALAWVERNIKVPLTEPQK
                     AGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQ
                     VIRRDQESALTCWGIEQ"
     gene            1718..>2162
                     /locus_tag="RHX79_004705"
     CDS             1718..>2162
                     /locus_tag="RHX79_004705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2514 domain-containing protein"
                     /protein_id="HDV2199772.1"
                     /translation="MNQIFTVILLVLVGFVVGNVWSDRGWQKKWAERDAAELSQEVNV
                     QFAARIIEQGRSISRDEAVKDAQQKAAEISARAADLSDSVNQLRAEATKYAIRLDAAQ
                     HTANLAAAVRGKTTKAAEGMLTNMLGDIAAEAQLYAEIADKRYIAG"
BASE COUNT          594 a          448 c          579 g          541 t
ORIGIN      
        1 gcgccgttga gaacaacgtg tgctgtcaaa actaccccgt agactccgat cttttcaaac
       61 atattgcacc atccgtgtac atcggggtga ggatatgaaa tcaatggata agttaacaac
      121 aggtgttgcc tatggcacat cggcgggtaa tgctggtttc tgggcattgc agttactcga
      181 taaagtaact ccgtcacagt gggctgcaat cggtgtgctg ggtagcctgg tttttggcct
      241 gctgacgtat ctgacaaatc tttatttcaa gattaaagaa gacaggcgta aggctgcgag
      301 aggagagtaa ttcaatgact caaaactatg aactgattgt gaaagggatc cgcaattttg
      361 agaataaagt tacggtaact ttagcattac aggacaaaga acgctttgac ggtgaaattt
      421 ttgacctgga catctcgctg gaccgtgttg aaggtgccgc gctggagttt tatgaggcag
      481 cagccagaat gagcatcaga caggtcttcc tggatgttgc tgccgggtta tgtgaagggg
      541 atgagcagtc gccggaaaag cgccccataa ttttagaggc gcagaatgtg tggataacct
      601 acaaaggaaa gctaccggga agaattactg gttctctgaa gacgccaccg acggcattgc
      661 ggtcagaaaa agatgatatt gaatcgccca ttgaaaaact ggagggtagc gtcgctgatc
      721 tgaataaaaa attgtcggtg ctgattcctt ctgaagatga aaaaaaacgc cgcgatgagc
      781 agtttgcggc gttttacgat tattgcattg aagttactcg caggaatttt gtgaagattt
      841 ttgaggaggg taaatctctt cagtaagctt aatggcggac gctgcaatta attcaggaag
      901 gtccgcaagg tcatctgtca gtggatatga tgaaaaatcg gcggcagttc tgttaagaag
      961 cgctttaact aattcctttt ccttctccgg caacaagttg attagagcta cgactgcttg
     1021 cctgagtgcg attaaatcag caaaagtttg ttttggtaga tttgtgtaat ccatagtcac
     1081 ctctgtgttt atcagattga catcctcctc ccgccagtgc ccatcactgg tgaggtaaga
     1141 tttaacatat ccggggattt gaagccgata aatcctgata aatatccatg aacgtaaaaa
     1201 tcagatacag cctgtcggct gctgttctgg cactgattgc cgccagtgct cctgcccccg
     1261 acattctcga tcagtttctg gatgaaaaag aggggaatca caccactgca taccgcgatg
     1321 gctccggcat atggaccatc tgtcggggag caacgatggt ggacggtaaa cctgttattc
     1381 cgggaatgaa actgtcgaag gaaaaatgcg cccaggttaa cgccattgag cgggataagg
     1441 cgctggcatg ggtggagcgc aatataaaag ttccactgac cgagccacag aaagccggta
     1501 tcgcgtcatt ctgtccctat aacattggcc ctggtaagtg ttttccgtcg acgttttata
     1561 agcggcttaa tgccggtgat cgtaaaggcg catgcgaggc gattcgctgg tggataaagg
     1621 acggtggacg tgattgccgc attcgttcaa ataattgtta cggtcaggtt attcgtcgtg
     1681 accaggagag tgcattaacc tgctggggga tagaacagtg aatcagatat tcacggtgat
     1741 tttgctcgtg ttggtaggat ttgtcgtagg taatgtctgg agcgacagag gatggcaaaa
     1801 aaaatgggcg gagcgtgatg ctgccgaatt atctcaagag gtaaatgtcc aatttgctgc
     1861 tcgaataatt gaacaggggc gaagtatatc ccgtgatgag gctgttaaag atgcacaaca
     1921 gaaagccgct gaaatttctg ccagggctgc tgatctgtct gatagtgtta accagctgcg
     1981 tgccgaagca acaaaatatg ccatacgcct tgacgcagcg cagcataccg caaatcttgc
     2041 cgctgccgtc agaggcaaaa caaccaaagc cgccgaagga atgctcacca acatgctcgg
     2101 agatattgca gcagaagctc agctttatgc tgaaattgct gacaaacgct acatcgcagg
     2161 ag
//
LOCUS       DAPGWB010000315         2126 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.320, whole genome shotgun sequence.
ACCESSION   DAPGWB010000315 DAPGWB010000000
VERSION     DAPGWB010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.320"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            120..2105
                     /gene="yjcS"
                     /locus_tag="RHX79_004706"
     CDS             120..2105
                     /gene="yjcS"
                     /locus_tag="RHX79_004706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl sulfatase YjcS"
                     /protein_id="HDV2199773.1"
                     /translation="MNNSRLFRFSRIVIALTAASGMMVNTAYATDEAKAATQYTQQVN
                     QNYAKSLPFSDRQDFDDAQRGFIAPLLDEGILRDANGKPYYRGEDYKFDINAPAPETV
                     NPSLWRQSQLNGISGLFKVTDRMYQVRGQDISNITFIEGDTGIIVIDPLVTPPSAKAA
                     LDLYFQNRPQKPIVAVIYTHSHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISE
                     NVLAGNIMSRRALYSYGLLLAHNPQGNIGNGLGVTLASGYPSIIAPNKTITKTGEKMI
                     IDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWT
                     EYLNETLDMWGNDAEVLFMPHTWPVWGNKHINDYIGKYRDTIKYIHDQTLHLANQGYT
                     MNEIGDMIKLPPALANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMG
                     KRYVQALGGSARVINLAQEANKQGDYRWSAELLKQVIAANPGDQVAKNLQANNFEQLG
                     YQAESATWRGFYLTGAKELREGVHKFSHGTTGSPDTIRGMSVEMLFDFMSVRLDSAKA
                     AGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQSQADASFYISREDLHAVLTGQAKMA
                     DLVKAKKAKIIGNGAKLEEIIACLDNFDLWVNIVTPN"
BASE COUNT          559 a          563 c          524 g          480 t
ORIGIN      
        1 ttccgctcac acttccactt attaaagtcg caaattccca attatgataa cgccagcttt
       61 aaatgacgta ttttgcatgg attacatatt tacgacacaa atgataaatg gagatttata
      121 tgaataactc tcggttattc cgttttagca ggattgttat tgcgttaact gctgccagcg
      181 gcatgatggt aaataccgct tacgcaacag atgaagcgaa agccgccact caatataccc
      241 aacaggttaa tcagaattac gccaaatcat taccgtttag cgatcgtcag gattttgacg
      301 acgctcagcg tggatttatc gctccgctgc tggatgaagg tattctgcgc gatgctaatg
      361 gcaaaccata ttatcgcggg gaagattata aatttgatat caatgcgccc gcgcccgaaa
      421 ccgttaaccc tagcctgtgg cgtcagtcgc agttaaacgg tatttccggc ctgtttaaag
      481 tcaccgacag aatgtaccag gttcgcggtc aggatatctc caacatcacc tttatcgaag
      541 gtgataccgg gattattgtc atcgacccgc tggtgacgcc accgagcgca aaagccgccc
      601 ttgaccttta cttccaaaat cgcccgcaaa aaccgattgt tgcggttatt tatacccaca
      661 gccataccga ccactatggc ggcgtgaaag gcattatctc tgaagctgat gtgaaatccg
      721 gtaaagtgca ggttatcgcc cctgctggct ttatggacga agccatcagc gaaaacgtac
      781 tggcgggtaa tattatgagc cgccgtgcac tttactccta cggcctgctg ctggcgcata
      841 accctcaggg taacatcggc aatggtcttg gcgtaacgct ggcatcgggc tacccgagca
      901 tcatcgcacc gaacaaaacc atcaccaaaa ccggcgagaa gatgattatc gacggcctgg
      961 agtttgactt cctgatgacc ccaggtagcg aagcgccagc cgaaatgcac ttctatattc
     1021 cggccctgaa agccctgtgt accgccgaga acgccacgca taccctgcac aacttctaca
     1081 ctctgcgcgg cgcgaaaacc cgcgacacca gcaagtggac cgagtatctg aacgaaacgc
     1141 tggatatgtg gggtaacgac gcggaagtcc tgtttatgcc gcacacctgg ccggtctggg
     1201 gcaataagca tatcaatgat tatattggta aatatcgcga tactatcaag tacattcacg
     1261 accagaccct gcacctggcg aaccagggct acaccatgaa tgaaatcggc gacatgatta
     1321 aactgccgcc tgcacttgcc aataactggg ccagccgtgg ctattacggt tctgtcagcc
     1381 acaacgcccg cgcggtgtat aacttctatc ttggctatta cgacggtaac ccggctaacc
     1441 tgcatccgta tggtcaggtg gagatgggta aacgttacgt gcaggcgctg ggcggttctg
     1501 cccgtgtcat caacctggcg caagaagcga acaagcaagg tgattaccgc tggtcggcag
     1561 aactgctgaa acaggtgatt gccgccaacc cgggtgacca ggtcgcgaag aatctgcaag
     1621 cgaataactt tgaacagctg ggctatcagg ccgagtccgc cacctggcgc ggtttctacc
     1681 tgaccggcgc gaaagagctg cgcgaagggg tgcataagtt cagccacggc accaccggtt
     1741 ccccggacac cattcgcggg atgtcggtcg aaatgctgtt cgactttatg tccgttcgcc
     1801 tcgatagcgc gaaagccgcg ggtaaaaata tcagcctgaa cttcaatatg agcaatggcg
     1861 ataacctcaa cctgacgctg aacgatagcg tgcttaacta ccgtaaaaca ctgcaatccc
     1921 aagctgacgc ctctttctac atcagccgtg aagatctgca cgccgtgctg accgggcaag
     1981 ccaaaatggc ggatctggta aaagcgaaga aagccaaaat tattggcaat ggcgcgaaac
     2041 tggaagaaat tatcgcctgt ctggataatt tcgatttgtg ggtgaatatc gtaaccccaa
     2101 attaatgtca ctcgcttttg ggggtg
//
LOCUS       DAPGWB010000316         2118 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.321, whole genome shotgun sequence.
ACCESSION   DAPGWB010000316 DAPGWB010000000
VERSION     DAPGWB010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.321"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..166
                     /locus_tag="RHX79_004707"
     CDS             <1..166
                     /locus_tag="RHX79_004707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000844627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="relaxase"
                     /protein_id="HDV2199774.1"
                     /translation="ERTPQQERQKAAREAERGREAWTLGQGMKKPVAGCYGRLTRWKG
                     GGDVVYMALL"
     gene            complement(198..848)
                     /gene="tetR(A)"
                     /locus_tag="RHX79_004708"
     CDS             complement(198..848)
                     /gene="tetR(A)"
                     /locus_tag="RHX79_004708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000164043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(A)"
                     /protein_id="HDV2199775.1"
                     /translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWH
                     FRNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAG
                     TRPGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGG
                     TVEQAPLSPLLRAAIDAFDEAGPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD"
     gene            954..>2118
                     /gene="tet(A)"
                     /locus_tag="RHX79_004709"
     CDS             954..>2118
                     /gene="tet(A)"
                     /locus_tag="RHX79_004709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000804064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(A)"
                     /protein_id="HDV2199776.1"
                     /translation="MKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAH
                     YGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIG
                     RIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPH
                     APFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAV
                     FFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGE
                     RRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQG
                     QLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRG"
BASE COUNT          336 a          672 c          669 g          441 t
ORIGIN      
        1 cgagcggacg ccgcagcagg agcgccagaa ggccgccaga gaggccgagc gcggccgtga
       61 ggcttggacg ctagggcagg gcatgaaaaa gcccgtagcg ggctgctacg ggcgtctgac
      121 gcggtggaaa gggggagggg atgttgtcta catggctctg ctgtagtgag tgggttgcgc
      181 tccggcagcg gtcctgatca atcgtcaccc tttctcggtc cttcaacgtt cctgacaacg
      241 agcctccttt tcgccaatcc atcgacaatc accgcgagtc cctgctcgaa cgctgcgtcc
      301 ggaccggctt cgtcgaaggc gtctatcgcg gcccgcaaca gcggcgagag cggagcctgt
      361 tcaacggtgc cgccgcgctc gccggcatcg ctgtcgccgg cctgctcctc aagcacggcc
      421 ccaacagtga agtagctgat tgtcatcagc gcattgacgg cgtccccggc cgaaaaaccc
      481 gcctcgcaga ggaagcgaag ctgcgcgtcg gccgtttcca tctgcggtgc gcccggtcgc
      541 gtgccggcat ggatgcgcgc gccatcgcgg taggcgagca gcgcctgcct gaagctgcgg
      601 gcattcccga tcagaaatga gcgccagtcg tcgtcggctc tcggcaccga atgcgtatga
      661 ttctccgcca gcatggcttc ggccagtgcg tcgagcagcg cccgcttgtt cctgaagtgc
      721 cagtaaagcg ccggctgctg aacccccaac cgttccgcca gtttgcgtgt cgtcagaccg
      781 tctacgccga cctcgttcaa caggtccagg gcggcacgga tcactgtatt cggctgcaac
      841 tttgtcatgc ttgacacttt atcactgata aacataatat gtccaccaac ttatcagtga
      901 taaagaatcc gcgcgttcaa tcggaccagc ggaggctggt ccggaggcca gacgtgaaac
      961 ccaacagacc cctgatcgta attctgagca ctgtcgcgct cgacgctgtc ggcatcggcc
     1021 tgattatgcc ggtgctgccg ggcctcctgc gcgatctggt tcactcgaac gacgtcaccg
     1081 cccactatgg cattctgctg gcgctgtatg cgttgatgca atttgcctgc gcacctgtgc
     1141 tgggcgcgct gtcggatcgt ttcgggcggc ggccggtctt gctcgtctcg ctggccggcg
     1201 ctgctgtcga ctacgccatc atggcgacgg cgcctttcct ttgggttctc tatatcgggc
     1261 ggatcgtggc cggcatcacc ggggcgactg gggcggtagc cggcgcttat attgccgata
     1321 tcactgatgg cgatgagcgc gcgcggcact tcggcttcat gagcgcctgt ttcgggttcg
     1381 ggatggtcgc gggacctgtg ctcggtgggc tgatgggcgg tttctccccc cacgctccgt
     1441 tcttcgccgc ggcagccttg aacggcctca atttcctgac gggctgtttc cttttgccgg
     1501 agtcgcacaa aggcgaacgc cggccgttac gccgggaggc tctcaacccg ctcgcttcgt
     1561 tccggtgggc ccggggcatg accgtcgtcg ccgccctgat ggcggtcttc ttcatcatgc
     1621 aacttgtcgg acaggtgccg gccgcgcttt gggtcatttt cggcgaggat cgctttcact
     1681 gggacgcgac cacgatcggc atttcgcttg ccgcatttgg cattctgcat tcactcgccc
     1741 aggcaatgat caccggccct gtagccgccc ggctcggcga aaggcgggca ctcatgctcg
     1801 gaatgattgc cgacggcaca ggctacatcc tgcttgcctt cgcgacacgg ggatggatgg
     1861 cgttcccgat catggtcctg cttgcttcgg gtggcatcgg aatgccggcg ctgcaagcaa
     1921 tgttgtccag gcaggtggat gaggaacgtc aggggcagct gcaaggctca ctggcggcgc
     1981 tcaccagcct gacctcgatc gtcggacccc tcctcttcac ggcgatctat gcggcttcta
     2041 taacaacgtg gaacgggtgg gcatggattg caggcgctgc cctctacttg ctctgcctgc
     2101 cggcgctgcg tcgcgggc
//
LOCUS       DAPGWB010000317         2114 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.322, whole genome shotgun sequence.
ACCESSION   DAPGWB010000317 DAPGWB010000000
VERSION     DAPGWB010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.322"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..2045)
                     /locus_tag="RHX79_004710"
     CDS             complement(<1..2045)
                     /locus_tag="RHX79_004710"
                     /inference="COORDINATES: protein
                     motif:HMM:NF027494.1,HMM:TIGR04415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIDA repeat-containing protein"
                     /protein_id="HDV2199777.1"
                     /translation="MLAGLIAGLMLPTVPALAQVFNDEILDYSSSMSLSAGDSAFNTT
                     IDGGEQYVSSGGSAISTTINDGAQIIFNGGTASTTTINGGYQDISSGGSVTNTLISGG
                     DQYISDGGSATNTVIDGGTQYISSGGNAIETTIENGFQEVSNGGSATSTVINAGFQNI
                     SSGGSATSTIINAGFQDVSNGGSATSTTINGGVQLISSGGSAVDTTIQSGIQEVGEGG
                     SASGTTINNSGIQFISSGGSATATTINSGGWQEISSGGSATETAINGGIQWIYDGGSA
                     SDSTINSGYQVISSGGSVTSTTIYRGGEQSIHNAGLATGTIISGGEQLVSSGGSAVDT
                     TIEGGLQTILNGGNVSGTLISGGEQRVSSGGSAVDTTIEEGLQTVLNGGNVSGTHISG
                     GEQNISSGGSAVDTTIEEGLQTVLNGGNVSGTHISGGEQNISSGGSAVDTTIEVGLQT
                     VFDGGSVNGTIIDGGEQHISSGGSAINTTLDGYQTVFNGGNATGTTINGGFQNISSGG
                     SATSTIINAGFQEVSSGGSATSTTINAGFQALYDSSIASGTVINNGFQLISSGGSAIN
                     TTIKGGFQEVSDGGRAIETTITSGWQNVLSGGVATETLIVGGVQTIYDGGSASEITIN
                     SGYQVISSGGSVTTTTIYRGGEQSITNAGLATGTIIRGGEQRVSSGGSAVDTTIEGGL
                     "
BASE COUNT          508 a          610 c          449 g          547 t
ORIGIN      
        1 agtcccccct caatggttgt gtcaacggca ctgccgccgc tggaaactcg ctgctccccg
       61 ccacgaatga tggtcccggt agcaaggcct gcattagtaa tactctgctc cccaccacgg
      121 taaatggtcg tggtggttac actgccaccg cttgagatga cctggtaacc actgttgatt
      181 gtaatctccg acgctgagcc tccgtcgtaa atcgtctgga ctcccccgac aatgagcgtc
      241 tcagttgcaa ccccaccact taatacattc tgccagccac tagtaattgt ggtctcaata
      301 gctctgccac catcgctaac ctcctggaat ccccctttaa tggtggtgtt gatggcagag
      361 ccaccactgg aaatgagctg gaagccatta ttaataacgg tgccgctggc tatactgcta
      421 tcgtagagag cctggaaccc ggcattaata gtggtgctgg tagcactgcc accactggaa
      481 acctcctgga atccggcatt aataatggtg ctggtagcac tgccaccact ggaaatattc
      541 tggaacccgc cattaattgt ggtgcctgtt gcgttgccac cattgaaaac tgtctgatag
      601 ccatccagtg tggtgttaat cgcacttccc ccactggaaa tgtgctgctc cccaccatca
      661 atgatcgtgc cattaacact tccgccatca aaaacagtct gtagtcccac ctcaatggtg
      721 gtgtctacag cactaccacc gctggaaatg ttctgctcac ctccgctaat gtgagtcccg
      781 gagacatttc cgccattgag aacagtctga agcccctcct caatggtagt gtctacagca
      841 ctaccaccgc tggaaatgtt ctgctcacct ccgctaatgt gagtcccgga gacatttccg
      901 ccattgagaa cagtctgaag cccctcctca atggtggtgt ctacagcact accaccgctg
      961 gaaactcgct gctctcctcc gctaatgagt gtccctgata catttccgcc attgagaatg
     1021 gtctgcagcc ccccctcaat ggttgtatct acggcactac caccgctgga gactagctgc
     1081 tccccgccac tgatgatggt tccggtcgca agacctgcat tgtgaatact ctgctcccca
     1141 ccacggtaaa ttgtggtaga agttacactg ccgccgctgg agatgacctg gtaaccactg
     1201 ttgatggtac tatctgaagc tgagcctcca tcgtaaatcc actgaatgcc tccatttatg
     1261 gccgtctcag ttgcagagcc accactggat atttcctgcc aaccgccact attaatagtg
     1321 gttgctgtag cacttcctcc actgctgatg aactggatac cagaattatt tatagtggta
     1381 ccacttgcac ttcccccctc accaacttcc tgaatcccgc tttgaatagt ggtgtcaaca
     1441 gcactgccac cgctggaaat gagctggacg ccaccattaa tagtggtgct ggtagcactg
     1501 ccaccattgg aaacatcttg gaatccggca ttaataatgg tgctggtagc actaccacca
     1561 cttgaaatgt tctggaatcc ggcattaata acggtactag tagcactgcc accattggaa
     1621 acctcctgga acccattttc aatagtggtt tcaatagcat tgcctccact ggatatatat
     1681 tgagttcccc catcgataac ggtattagtc gcactgccac catcggaaat atactgatcc
     1741 cctccgctaa ttagtgtatt agtgacactt ccaccactcg aaatatcttg gtaaccacca
     1801 ttaatggtcg tcgttgaagc ggtaccacca ttaaaaatta tctgtgcccc atcattgata
     1861 gtcgtgctta tagcgctgcc accactggat acgtattgct ctccgccatc aatggtggta
     1921 ttaaatgcgg aatcacctgc tgataaagac attgagctac tataatcaag tatttcatca
     1981 ttaaatactt gggcaagagc aggtacggtt ggcaacataa gccccgcaat tagtccggct
     2041 aacattgttc tctttatttt tcgatgccgt tgcccacctt tgcgggttag ctcagaagtc
     2101 accacccaca tacc
//
LOCUS       DAPGWB010000318         2074 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.323, whole genome shotgun sequence.
ACCESSION   DAPGWB010000318 DAPGWB010000000
VERSION     DAPGWB010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.323"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..1336)
                     /locus_tag="RHX79_004711"
     CDS             complement(<1..1336)
                     /locus_tag="RHX79_004711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HDV2199778.1"
                     /translation="MKNCWKILEIEETTDVDIIRRAYLALLPSFHPETDPQGFKQLRQ
                     AYEEALRIAQSPAKSVWQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNY
                     CSMEDIDELRWSLCTIAMNTAHLSFECVVLLAERLRWLQEENVGEIDEEELESFLYAI
                     AKGNVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPEWLTLYLAQHRAVIIPDDAKL
                     HRNLLRWYSAGRLDIPELLDYARSWREAEPDNEDARYYEYAQRVYCGEGESLLAELCD
                     YWREYPSTQADALMLQWCRQHRVDYYPLVVMMIEARDLVNDKGKPLLYVPGDSARTRF
                     HLYEILSDEKLSALGRSLVEMVLHKGRKPRISLTRDTEHPLWPLYLVAKQLVQANQPT
                     EESLMPIVSRLDAEDRCPLEALIIRRLLIQAANFTEKQTVEPEPQPQPMPVDD"
     gene            complement(1333..2040)
                     /locus_tag="RHX79_004712"
     CDS             complement(1333..2040)
                     /locus_tag="RHX79_004712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HDV2199779.1"
                     /translation="MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSS
                     WGIDARDDLLRTIHRIIDNGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFV
                     ASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYRNWRQ
                     YFAGYTFGRQYWQSPEDDNLQLLREFLARKEYDDSGNDMFYQLFASDNAYYPTLSWQP
                     LAYYSACPETLKDMSDL"
BASE COUNT          567 a          505 c          469 g          533 t
ORIGIN      
        1 catcgtcaac gggcattggc tgcggttgcg gctccggttc aacagtttgc ttctcggtaa
       61 aattcgccgc ctgaattaat aatcgacgaa taattaatgc ttccagtgga caacgatctt
      121 ctgcatcaag gcggctcaca atcggcatta atgattcttc ggttggttgg ttcgcctgca
      181 ctaattgttt ggcaactaaa tataatggcc ataagggatg ttctgtatca cgcgtgagtg
      241 agatccgcgg cttacgtcct ttgtgcaaaa ccatctcgac cagtgaacgc cccagcgcag
      301 agagtttttc atcgctgagt atttcgtata aatgaaaacg cgtacgggcg ctgtcgccgg
      361 ggacataaag tagcggtttt cccttatcgt taaccagatc acgcgcttca atcatcatca
      421 ccactaatgg gtaataatcg acccgatgct gacggcacca ttgcaacatt aaagcatccg
      481 cctgggtgga gggatactcg cgccagtagt cacaaagttc tgccagcaag ctttcgcctt
      541 ctccacaata gacgcgttgc gcgtattcat aataacgcgc atcttcatta tcaggttcag
      601 cttcccgcca cgaccgggcg taatccagaa gttcggggat atccaggcga cctgcgctat
      661 accagcggag taaatttctg tgcagttttg catcatcggg gatgatcact gcgcgatgtt
      721 gcgctaaata caatgtcagc cattctggat gcgatgacca aatccgagcg aacatttggt
      781 aaaaatcgat ggtgtcattt tgcacggcaa cgggcagatg cagaatggtc tggaagttaa
      841 aaacattccc cttcgcaatg gcatataaaa aggattccag ttcttcttcg tctatttccc
      901 cgacgttttc ctcctgcaac caccgcaatc tttctgctaa taacaccacg cactcgaagg
      961 ataaatgggc agtgttcatg gcgattgtgc acagcgacca gcgtaattca tcaatatctt
     1021 ccatcgagca ataatttaat tgctgaatga atcgctgcca ggcggagggc agaaaacgtt
     1081 cgctatcaga ggcaagtaac gcgcgaaagg cgagcagaat ttcatgttct gctacctcat
     1141 attcttctgg ttgccaaaca gatttagcag gcgactgcgc aatccggagc gcctcctcat
     1201 acgcctgacg aagttgttta aaaccctgcg gatcggtttc tggatgaaag gacggtaaca
     1261 gcgccagata agcgcggcgg ataatatcga cgtcagtcgt ttcctctatt tcgaggatct
     1321 tccagcaatt tttcataggt cgctcatatc cttaagcgtt tccgggcatg cagaatagta
     1381 agccaatggt tgccaggaca aggtagggta atacgcatta tcactggcaa ataattgata
     1441 aaacatatca ttgccggaat cgtcgtattc tttacgcgct aagaattcac gtaataactg
     1501 cagattatca tcctcgggag actgccaata ttgccgacca aaggtataac cggcaaagta
     1561 ttgccgccag ttacgataat aacgtagagc ccgtagatga atgcgcgact ggatccatag
     1621 actttcttct tcgctcaacc agttattaag tacgcccatt cggcttaaaa aacccatccg
     1681 gacataatcc caggctttaa ttcctccctc accacagcat tcggcggtgc tggcgacaaa
     1741 ttgcgcataa gcctgacctt gctcatttag ttcagcaaga tagtcacgcc attcacatgg
     1801 cgaataacga aaccagcggt gataaaaccc tgccaaccga gcggcatgac cgttatcgat
     1861 tattcggtga attgtgcgca gcaggtcatc acgggcatca attccccagg aggaagaaag
     1921 gtcaaaaaag catgtaccta aatacatttt gggtgatgaa tgcgaaggta aacagcattc
     1981 attgcgtatt tccatcggag tggaaagtgc aaacaatatt ttttgcgact ccatgtccat
     2041 ataatttatc cttaaatatt cattaaatga atat
//
LOCUS       DAPGWB010000319         1950 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.324, whole genome shotgun sequence.
ACCESSION   DAPGWB010000319 DAPGWB010000000
VERSION     DAPGWB010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.324"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..774
                     /gene="traB"
                     /locus_tag="RHX79_004713"
     CDS             <1..774
                     /gene="traB"
                     /locus_tag="RHX79_004713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000146653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F-type conjugal transfer pilus assembly protein
                     TraB"
                     /protein_id="HDV2199780.1"
                     /translation="GADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEA
                     WGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWG
                     AGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQ
                     YHPVIPIGAGNEVTVVFQDGFQLKTVEEMALEQSQSTAEEGNPESPVPNPPSAESHLN
                     GFNTDQMLKQLGNLNPQQFMSGDKNPLGGDAGKEGGNGG"
     gene            743..1330
                     /locus_tag="RHX79_004714"
     CDS             743..1330
                     /locus_tag="RHX79_004714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001438629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraP"
                     /protein_id="HDV2199781.1"
                     /translation="MPARRAEMAGDALTFRVAFVVRWLLWVVRFVVIWPLATMALMAL
                     FVLWKDNTTPGKLLVKEINFVRQTAPAGQFPVSECWFSSSDSSGRSEIQDICHYRAAD
                     AADYVRETDRSLMQLVTAFWATLALMYMSFAAGTGKYPVLPGKMKCIRVVTADEYLKD
                     VYTEDASLPGKIRKCHVYFPDDRTNRSNGDKNEHA"
     gene            1269..1637
                     /locus_tag="RHX79_004715"
     CDS             1269..1637
                     /locus_tag="RHX79_004715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001681801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbD"
                     /protein_id="HDV2199782.1"
                     /translation="MFISLMTEQTEATEIKMNMRNINVITARVVPDKNVSDDFMHAVL
                     SNCTTKIVLPAPKVFSSESLPHNFNMAAVGVMKKGMSMSLFSSPGNTVVSGHPCAGKT
                     NLTAELISAVVGSNKKGEGQ"
     gene            1634..>1950
                     /gene="traV"
                     /locus_tag="RHX79_004716"
     CDS             1634..>1950
                     /gene="traV"
                     /locus_tag="RHX79_004716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system lipoprotein
                     TraV"
                     /protein_id="HDV2199783.1"
                     /translation="MKQISLFIPLLGTLLLSGCAGTNTEFECNATTSDTCMTMEQANE
                     KAKKLEQSSEAKPVAASLPRLAEGNFRTMPVQTVTATTPSGSRPAVTAHPEQKLLAPR
                     PLFT"
BASE COUNT          493 a          462 c          570 g          425 t
ORIGIN      
        1 ggggcggatg ccaatgcctc agtcaccggt aatgaatcca cggtgccgat gcagttgcgt
       61 atcaccggcc tggtggaaat gccgaacagc aagacgtatg acgcaacggg atgttttgtg
      121 gggctggaag cctgggggga tgtgtccagt gaacgtgcca ttgtacgcac ccgcaatatc
      181 agttgcctga aggacggcaa aactattgat atgccgatta aggggcatgt cagcttccgg
      241 ggtaaaaacg gtatcaaggg cgaagtggtg atgcgtaacg gcaaaatcct cggctgggca
      301 tggggcgcgg gatttgttga cggtatcggt cagggaatgg agcgcgcctc ccaaccggct
      361 gtcgggctgg gtgccacagc cgcttacggg gctggtgatg tcctgaaaat gggtatcggt
      421 ggcggcgcat cgaaagccgc acagacgctc agtgactact acatcaaacg tgccgaacag
      481 tatcacccgg tgataccgat tggtgcgggc aacgaagtga ccgtggtgtt ccaggacggc
      541 ttccagctga aaaccgtgga ggaaatggca ctggagcagt cacagagtac agcggaagag
      601 ggtaacccgg aaagcccggt gccgaatcct ccctcggcag aaagccacct gaacggtttt
      661 aacaccgacc agatgctgaa acagctgggc aatctgaatc cgcagcagtt tatgtccgga
      721 gacaagaacc cgctgggcgg ggatgccggc aaggagggcg gaaatggcgg gtgatgcact
      781 gacattccgt gtggcgtttg tcgttcgctg gctgctgtgg gtcgtcaggt ttgtggttat
      841 ctggccgctg gccacaatgg ccctgatggc tctgtttgtt ttatggaagg acaacaccac
      901 gccggggaaa ttactggtta aggagattaa cttcgtaaga caaacagcac ctgccggaca
      961 gttcccggtc agtgaatgct ggttttcttc ctctgattct tcaggcagat cagaaataca
     1021 ggatatctgc cattaccgcg cggctgatgc tgcagattat gtcagggaga ctgaccggtc
     1081 actgatgcaa ctggtcaccg cattctgggc aacgctggca ctgatgtata tgtcgtttgc
     1141 ggcaggcacc gggaaatatc cggtgctgcc cggaaaaatg aaatgtatcc gggtggtaac
     1201 cgcagatgaa tatctgaagg acgtttatac ggaagacgct tccctgccgg gaaaaatcag
     1261 gaaatgccat gtttatttcc ctgatgaccg aacaaacaga agcaacggag ataaaaatga
     1321 acatgcgtaa tattaatgtt attacagccc gcgttgtgcc ggataaaaac gtatcagatg
     1381 attttatgca tgctgttctc agtaactgca ccacaaaaat agttcttcct gctccgaagg
     1441 tgttcagttc tgaatcattg ccgcacaatt ttaatatggc tgctgtcggt gtgatgaaga
     1501 agggaatgtc gatgagctta ttttcttctc cgggaaatac agtggtctcc ggacatccct
     1561 gtgcagggaa aacaaatctg acagcagagt taatttctgc tgttgtgggg agtaataaaa
     1621 aaggagaagg gcaatgaaac agatttcttt atttattcct ctgctgggaa ccttattact
     1681 ttccggctgc gcaggaacaa atacggaatt tgagtgtaac gccaccacat ccgatacctg
     1741 tatgacgatg gagcaggcca atgagaaggc caaaaaactg gagcagtcct cagaagcaaa
     1801 gccggttgcg gcatcactgc cgcgcctggc tgaagggaac ttccggacaa tgccggtgca
     1861 gaccgtcacc gcgaccactc cgtccggcag cagacctgcg gtgacagcac atccggagca
     1921 gaaactgctg gcaccacgcc cgctgtttac
//
LOCUS       DAPGWB010000320         1869 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.325, whole genome shotgun sequence.
ACCESSION   DAPGWB010000320 DAPGWB010000000
VERSION     DAPGWB010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.325"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..1051
                     /locus_tag="RHX79_004717"
     CDS             <1..1051
                     /locus_tag="RHX79_004717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3560 domain-containing protein"
                     /protein_id="HDV2199784.1"
                     /translation="KRASESAQALDEVERLAAMIPPGQPILVGHHSERRARRDAQRIE
                     NGMKRAVMLFERAEYWEERARSALLHAKYKERPDVRWRRIKKIEADLRKAEKTIAQSQ
                     KYLTMWRAESLDLNMAKLISSHDHISACFPLDTYPRPAEKSQYEGSRSLWSALDDDII
                     TTEQAREIAIRCHERQIQHQQRWVNHYQNRLIYERAMLDESGGVVTRTQDFEPGGQVF
                     SRGEWLTIIRVNKSNGAVSSVTTPNYSFLGYSGTMKVTPDRITDYKAPSAEEAAVASQ
                     AAKRPPVVNYPGEGFREMTKAQWAALPRDCKAVRSVAEAEDHGAYRYRRTMDNNFRLV
                     NVYITDMKITEIPQK"
     gene            1099..1662
                     /locus_tag="RHX79_004718"
     CDS             1099..1662
                     /locus_tag="RHX79_004718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV2199785.1"
                     /translation="MHSQLRERIRLMRARLDNAAPVAEIRAESQLFVTPAPVCDRLVM
                     LAEISNRDHILEPSAGTGAILRAIRDTAPGAMCDAVEINSGLVRYLRENFNGVRVQCG
                     DFMEWQPVQYYSRVIMNPPFSHGQDIRHILRAFSLLRPGGVLVAVCLNGPRQQEKLLP
                     FSDVREELPRGTFAYTDVPTMIIRLRA"
     gene            complement(1730..>1869)
                     /locus_tag="RHX79_004719"
     CDS             complement(1730..>1869)
                     /locus_tag="RHX79_004719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pilus protein"
                     /protein_id="HDV2199786.1"
                     /translation="SSSSSSSSSSSSSSRNNNIISNRQMTGMKKQKPPSERPRNERGG
                     A"
BASE COUNT          418 a          503 c          565 g          383 t
ORIGIN      
        1 aaagcgggcc agtgaatccg cacaggcact tgatgaagtg gaaagactgg ccgcgatgat
       61 cccgcccggt cagcccattc ttgtggggca tcacagcgaa cgccgcgccc gtcgtgatgc
      121 gcagcgtatt gaaaacggca tgaaacgagc cgtgatgctc tttgaacgtg cggaatactg
      181 ggaagagcgg gcgcggtcgg cactgcttca cgcgaagtat aaagaacgtc cggacgttcg
      241 ctggcgtcgt atcaaaaaaa tcgaagctga tttgcgcaag gctgaaaaga ccatcgcgca
      301 gtcgcagaaa tatctgacga tgtggcgggc tgaatcgctg gatctgaata tggcaaaact
      361 catcagcagt catgaccata tcagcgcctg tttcccgctg gatacgtatc cgcgcccggc
      421 agaaaaaagc cagtatgaag gaagtcgatc gttatggtcg gccctggatg atgacatcat
      481 caccacggag caggcccgcg aaattgcgat ccgctgtcat gaacggcaga ttcagcatca
      541 acaacgctgg gttaaccact atcagaaccg cctgatctat gagcgtgcca tgctggacga
      601 aagcggcggc gtggttaccc ggacacagga ttttgagccg ggcggacagg ttttcagccg
      661 gggcgagtgg ctgaccatca tccgtgtgaa caaaagcaac ggggcggtga gttcagtcac
      721 aacgccaaat tacagttttc tcgggtacag cggcacgatg aaagtgacgc ccgatcgcat
      781 cacggactac aaagcaccat cggcagaaga ggctgccgtc gccagtcagg ccgcgaagcg
      841 tccgccggta gtcaactatc cgggggaagg tttccgggaa atgacaaagg cacagtgggc
      901 cgccctgccc cgggactgta aggccgtgcg cagtgtggca gaagcagaag accacggggc
      961 ataccggtac cgccgcacaa tggacaataa tttccgcctg gtgaatgtgt atatcaccga
     1021 catgaaaatc acggaaatcc cacagaaata aggtatatcc ccccgggaaa atccccgggg
     1081 gatgacggag ataatgatat gcacagtcag ttaagagaac gtatccggct gatgcgcgca
     1141 aggctggata acgccgcgcc ggttgctgaa atccgggctg aatctcagct ttttgtgact
     1201 cctgccccgg tctgtgatcg cctggtgatg ctggcggaga tcagcaaccg tgatcacatt
     1261 ctggaaccct ctgccggcac cggggccata ctgcgggcga ttcgggatac cgcgccgggg
     1321 gccatgtgtg atgcggtgga aatcaacagc gggctggtcc ggtatctgcg ggaaaatttt
     1381 aacggtgtca gggttcagtg tggcgacttc atggaatggc agccagtgca gtattacagc
     1441 cgggttatca tgaatccgcc gttcagccac gggcaggata tccggcatat cctgcgggcc
     1501 ttttccctgt tgcgtccggg tggcgtgctg gtcgccgtct gtctcaacgg accacgccag
     1561 caggagaagc tgttaccgtt ttctgacgtc cgcgaggagc tgccgcgcgg cacgtttgct
     1621 tataccgatg tcccgacgat gattattcgt ctgcgtgcct gatgacacag ggccggcggg
     1681 aggataaatg cctgtctgcc cgcgccggtg gcgctgaaag gggccgcgct cacgcgccgc
     1741 ccctttcatt acgcggacgt tctgatgggg gcttctgttt cttcatgcct gtcatttgtc
     1801 tgttactgat gatgttgttg ttcctgctac tgctactgct actgctactg ctactgctac
     1861 tgctactgc
//
LOCUS       DAPGWB010000321         1865 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.326, whole genome shotgun sequence.
ACCESSION   DAPGWB010000321 DAPGWB010000000
VERSION     DAPGWB010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.326"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(81..1493)
                     /gene="pykF"
                     /locus_tag="RHX79_004720"
     CDS             complement(81..1493)
                     /gene="pykF"
                     /locus_tag="RHX79_004720"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010346010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase PykF"
                     /protein_id="HDV2199787.1"
                     /translation="MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHG
                     QRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGN
                     SEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
                     PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHII
                     SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT
                     ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER
                     TDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFP
                     DATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVV
                     MVSGALVPSGTTNTASVHVL"
BASE COUNT          469 a          438 c          455 g          503 t
ORIGIN      
        1 tattgcttct ggttatcgat taaataaaaa aagcgcccat cagggcgctt cgatatacaa
       61 attaattcac aaaagcaata ttacaggacg tgaacagatg cggtgttagt agtgccgctc
      121 ggtaccagtg caccagaaac cataactaca acgtcacctt tgtgtgccag accgctctgc
      181 agagccagtt ctttacccag acggtagaaa tcatcagtag aagtgatctc tttaaccagc
      241 tgcggcacaa cgcctttgct cagtaccaac tgatgagccg ttttttcgtt ggtggtcagt
      301 gccaggatgg tggcatccgg gaagtattta cgtactgcgc gagcagattt accgccctgg
      361 gtagcaacca cgatcagcgg agcatccagt ttttcagcag tttcaacggc accacggcat
      421 accgcttcgg taatgcgcag tttacggttg tcattgttga actcgagacg gctgttcatc
      481 acgcggtcgg tacgttcgca gatggtcgcc atgatagaaa ccgcttccag cgggtattta
      541 ccttttgcgg attcaccaga cagcatcact gcgtcagtac cgtcgaggat ggcgtttgca
      601 acgtcaccgg cttctgcgcg agtcgggcgt gggtttttga tcatggaatc cagcatctgg
      661 gtcgcagtga taacgacttt acgtgcacgg atacattttt cgatcatcat cttctgggcg
      721 aagataactt cttctaccgg gatttctaca cccaggtcgc cacgcgcaac catgatgccg
      781 tcagaggctt cgaggatttc gtcgaagttg ttgaggcctt cctggttttc gattttggag
      841 atgatgtgga tgttttcgcc gccgtgcgct ttcaggtgct cacggatttc gataacgtca
      901 gaacgcttac gaataaagga agcagcaaca aagtctacgc cttgttcgca accaaagatc
      961 aggtcctgtt tgtctttttc agccagtgct ggcagagcaa tggaaacgcc aggcaggttc
     1021 acacctttgt tttcgcccag gtcaccgttg ttcagcactt tacagataac tttgttacct
     1081 tcaatggcgg taacttccat accgatcaga ccatcgtcaa ccagtacggt gttgccaaca
     1141 gacaggtcag tagtgaaacc ttcatacgtt accgcaacca tttcgctgtt gccgataaca
     1201 gatttatcag tggtgaaagt aaaggtctga ccagctttca gagaaacgtc gttaccgcct
     1261 tccagtttca tggtgcggat ttccggacct ttggtatcaa gcaggatagc ggcggtttta
     1321 ccagttttgc tcatcacgtt gcgcagattc tgaatgcgct gaccgtgttc tgcatagtca
     1381 ccatgagaga agttcagacg cataacgttc atgccagcgt ccagcatttt agctaacatc
     1441 tcttcagatt cggttttcgg tccgatggtg caaacaattt tggtcttttt catgacagtc
     1501 ttagtcttta agttgagaag gatgggagaa acttgctttc tgggcgcact gccggaaagc
     1561 gaatccggta ttacgaaagt ggtggtgcct cgctctaagg ataggtgaca tcgaaaaagc
     1621 gtgcagagga atgtgtgctt gtgtctcagc ccaacgtgag tgcctgtttt tgagtcgttg
     1681 agttctacag tccaaagtgc tgaaaccatt caagagtcaa ttggcgcgca ttatacgctg
     1741 aaattaatcc aaaaggaaaa caaaaacagc gtttcaaaaa atatacaact tgttagacaa
     1801 taaattgtta tcaaagattt aacgttccag ggaaaaggtt acgcaaaaac ttcgctgttt
     1861 gcgca
//
LOCUS       DAPGWB010000322         1824 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.327, whole genome shotgun sequence.
ACCESSION   DAPGWB010000322 DAPGWB010000000
VERSION     DAPGWB010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.327"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..1824
                     /locus_tag="RHX79_004721"
                     /pseudo
     CDS             1..1824
                     /locus_tag="RHX79_004721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439272.1"
                     /note="internal stop; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase family protein"
BASE COUNT          631 a          360 c          346 g          487 t
ORIGIN      
        1 ttccctttct ccagatacaa cttatcgaga gttgaataaa gcagcacagc gtagcattac
       61 agcgccagac aggataggag aaggaaaatc atgggtttat caacgagata caatgattga
      121 aagaggtgat aacagcggtg ttcatcagta tggtcctgct gaacatttca cccacattat
      181 atctgacaaa ccgtccccaa aagatgagta tattgcatat gctattaaca ttcctgacta
      241 tgagctggca gccgatgtat ataatattaa cgtgacgtca ccttccgaac agcaagaaac
      301 atttaaaata ctaatcaatc cagaacatct acggcaaaca cttgagcgta aatctcttac
      361 tgctgttcag aaatcacaat gtgaaatcat cacccctaaa aaacctggcg aagcgattct
      421 tcatgctttt aatgccacct accagcaaat cagggaaaat atgtctgagt ttgcacgttg
      481 ccattatggg tatatacaaa tccctccagt gacaactttc cgcgccgacg gaccagaaac
      541 tcccgaagaa gaaaagggtt actggtttca tgcttatcaa cccgaagatc tttgtaccat
      601 ccataatcca atgggagatt tgcaggattt tattgcattg gttaaagatg ctaaaaaatt
      661 tggtatcgat atcattcctg attatacctt taactttatg ggaattgggg gtagtggtaa
      721 aaatgacctg gattatccct ctgctgatat acgagcgaag atcagtaaag atatagaagg
      781 tggtatccct ggctattggc aaggtcaggt tttgattcca ttcattaaag atccagtaac
      841 aaaagaacgt aaacaaatcc atccagaaga tatacatctc actgcaaaag acttcgaagc
      901 aagtaaagat aacatctcta aggatgaatg ggaaaacctc catgcattaa aagaaaagcg
      961 tttaaatgga atgcctaaaa caacacccaa aagtgaccag gttattatgt tgcaaaatca
     1021 atacgttcgt gaaatgcgaa aatatggcgt acgaggttta cgttatgatg cggcaaaaca
     1081 ctcaaaacat gaacaaatag aaagatcaat aaccccaccg cttaaaaatt ataatgagcg
     1141 gttacacaat actaacttat ttaacccaaa atatcataaa aaagccgtta tgaattacat
     1201 ggaatatctg gtaacttgtc agttggatga acaacaaatg tcatcactgc tttatgaaag
     1261 agatgattta agcgccattg atttttcatt gctcatgaaa acgataaaag ccttttcatt
     1321 tggtggagat cttcaaaccc ttgcatcaaa accgggttcc acaatctcaa gtatcccatc
     1381 agaaagacgg atattgatta acattaacca cgattttcct aacaatggta atcttttcaa
     1441 tgactttcta tttaaccatc aacaagatga acaattagca atggcatata tagccgctct
     1501 gccgttcagc aggcctttag tttactggga tggccaagta ttaaaatcaa cgactgaaat
     1561 taaaaattat gatgggtcca cgcgtgtcgg cggtgaggcg tagcttaata aaggttgctc
     1621 tacctatcag cagctctaca atgaattcca cgcattatat atagataaag caggaatatg
     1681 gagcgcattt gagggtgtat ctgcaactaa aaacgttctg gcctttagtc gtggggattc
     1741 tgtgaacatt aatcactctc ctcatgatgg actagttata ataaataaag gaaacgaaga
     1801 agttgaaggt acctggccta acaa
//
LOCUS       DAPGWB010000323         1778 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.328, whole genome shotgun sequence.
ACCESSION   DAPGWB010000323 DAPGWB010000000
VERSION     DAPGWB010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.328"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..1312
                     /locus_tag="RHX79_004722"
     CDS             <1..1312
                     /locus_tag="RHX79_004722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
                     /protein_id="HDV2199788.1"
                     /translation="YNAITLGNGWNTPLGAISFYAARSSSKLNNDTRHEGTSYQVAYN
                     KYLVQTATRFSVAAWRYASQDYRTFSDHLYENDKHYHQSDYDDFYDIGRKNSLSANIM
                     QPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNNWQHISYTFSASQSYDENNKEEE
                     RFNLFISIPFYWGDDIAKTRHQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIY
                     VNQQQQNNDTSLGTNLSWRTPIAIIDGSYSHSKNAWQSGVSISSGLVVWPGGINITNQ
                     LSDTFAILDAPGLEGAHINGQKYNRTNSKGQVVYDLIIPHRENHLVLDIANSESETEL
                     QGNRQIIAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQ
                     GSRLFIRVDEIPTGIKVALNDEQNLFCTITFQHVIDENKTYICQ"
     gene            1325..1778
                     /locus_tag="RHX79_004723"
                     /pseudo
     CDS             1325..1778
                     /locus_tag="RHX79_004723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000871680.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial family protein"
BASE COUNT          563 a          348 c          344 g          523 t
ORIGIN      
        1 ctataatgct ataactctgg gaaatggttg gaatacaccg ctgggtgcca tctcttttta
       61 cgctgcccga tcgagtagta agttaaataa tgataccaga cacgaaggta cgagctatca
      121 ggtcgcctat aataaatatc tagtacaaac agccactcga tttagcgtgg ccgcctggcg
      181 ttatgcttcg caggattaca ggacattcag cgaccatctt tacgaaaatg ataaacacta
      241 tcatcagagt gattatgatg atttttatga tattggcaga aaaaatagcc tttctgctaa
      301 tattatgcaa cctttatcca ataatctggg aaatgtatca ttaagtgcgc tttggcggaa
      361 ttactggggg cgaagtggaa atgctaaaga ttaccaattc agttactcca ataactggca
      421 acacattagt tatactttct ctgccagcca atcttatgat gaaaataata aagaagagga
      481 gcgttttaat ctgtttatct ccattccttt ctactggggg gatgatattg ccaaaacacg
      541 tcaccaaatt aacttatcga attcgacctc attttccaaa gatggctatt cctccaacaa
      601 tactggaatt actggcatag ccggtgaaca tgatcagtta aattatggta tatatgttaa
      661 tcagcaacaa caaaataatg atacctcgct tggtacgaat ttaagctgga gaactcccat
      721 cgccataata gatggcagct atagtcattc taaaaacgcc tggcaaagtg gtgtaagtat
      781 tagtagtgga ttagttgtct ggcccggtgg tattaatatc actaaccagt tatccgatac
      841 atttgcaatt ctggatgcgc ctgggttaga aggtgcacat attaatggac aaaaatacaa
      901 tcgaacaaac agcaaaggcc aggttgttta cgacctgata atacctcatc gtgaaaacca
      961 tctggtactt gatattgcaa acagtgaaag tgaaacagaa ttgcagggca atcgtcaaat
     1021 tattgcacct taccgtggag cagtttctta tgtgcagttt acaactgacc aacgtaagcc
     1081 ctggtatata caggcactgc gtcccgatgg ttcgccatta acctttggct atgacgtact
     1141 ggatctccag gaaaataata ttggagtcgt tggccagggt agtcgccttt ttattcgcgt
     1201 agatgaaatt cccactggaa taaaagttgc tctcaatgat gaacagaact tattctgtac
     1261 tattactttt caacacgtta tcgatgaaaa caaaacatat atatgccagt aaaaggagtt
     1321 tactatgaag tggcttttat taatcacctt gagtctatat tcttttattg tgcaaagtgc
     1381 tccctgtgca ttgaccaatg tcggtgaaca acgtggaaca tatatactca agccactgag
     1441 tatgaaaggt aatctaaccg ccgaaaaatt gaaaacaccg gaaatatcat tgagtgtaca
     1501 gacttgcaag agacaaccaa cgccattaaa gttcattttt taacacagaa cgctttaagg
     1561 tttaaagtcg gaagtcgtca ttatattatt aatttcccct ttgaatctga cggtaaaaaa
     1621 atagagcttc cagggaagtc atcttataat ttagaagaaa tgctatctgc gataaatttc
     1681 accattccat attctatcgc atctgtatca gatagttcta acaccgcaga catttttcct
     1741 ggaactcctt ttcctttgtt gttcgaaatt gaagtgag
//
LOCUS       DAPGWB010000324         1732 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.329, whole genome shotgun sequence.
ACCESSION   DAPGWB010000324 DAPGWB010000000
VERSION     DAPGWB010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.329"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(171..413)
                     /locus_tag="RHX79_004724"
                     /pseudo
     CDS             complement(171..413)
                     /locus_tag="RHX79_004724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001368704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            472..887
                     /locus_tag="RHX79_004725"
                     /pseudo
     CDS             472..887
                     /locus_tag="RHX79_004725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558235.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1020..1595)
                     /locus_tag="RHX79_004726"
                     /pseudo
     CDS             complement(1020..1595)
                     /locus_tag="RHX79_004726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001368704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          451 a          447 c          389 g          445 t
ORIGIN      
        1 aggccccttg aaatacctga ctgtggatgt atcttaaaat aagagacagg cttgaatata
       61 tgtctaacac taacgctaat cagatgtgga agttcacgga gatattgcaa ttacctccgg
      121 atgtcaacaa cggatgaaaa gtggctcttc cgcaacctgg gtagagattt tcatgccagt
      181 ggactcatga ccctctgcct aagtagttca aatccgactc gaccatacat ctggcgtttc
      241 agcatcttca ggcgatttac atgaccttcg acaacaccat tactccagcg actgctgatt
      301 gcctcacata tagccgcagc atcggcttcc atccccgccg ccacgcgccg aaattctgct
      361 gaaccgcttt cgtggactcg agtgaaccag ctgcttggct gtgtagtgga tcggtaattc
      421 aggactcctc gaaatcctgt taatgttaaa acagtgaaaa tgagttgatg catgctcaaa
      481 ccccgtcgga ctcaacgtac cttttccccg gagttcaggc ttgaagctat cgaacaggtg
      541 gttaaatacc agcgtgatgt cagagaagtc gcgctggtac ttgagctcac ccctgaccat
      601 ttgcgtaaat ggatacggtt gtataagcag aaacttcagg gtattgagcc cgctggtaat
      661 gctattactc ctgaacaacg cgaaattcag cagcttaaag cgcagataaa gcgccctgag
      721 atggaaaaag aaatactaaa gcagactgcc gtgctgatga gctaaatccc cgggaagctg
      781 tcgcgctaat cacacggctg aaagcaaagt ggccagtgcg ggttctttgt catttattcg
      841 gtattcaccg tagcgtttat tacgcgcagg tgaagcgtcc tgttaataat atagccgcaa
      901 tagatgacat catgtccaaa cttgagagta ttgccggagt aaccagtcag cttcaggggg
      961 atttatttga tgtcacgaac ggtgcaatag tggctcttcc gcaacctggg tggagatttt
     1021 catgccagtg gactcattac cctctgcctg agtagttcaa atcctgctcg accatacatc
     1081 tggcgtttca gcatcttcag gcgatttaca tgaccttcga caacaccatt actccagcga
     1141 ctactgattg cctcacatat agctgcagca tcagcttcca tccccgccgc cacgcgccga
     1201 aattctgctg aaccgctttc gtggactcga gtgaaccaac tgcttagctg tgatttattt
     1261 tgggttttca gaatacggta gaactcgagt accagttgct gcgctatttt cagctccggt
     1321 tctttttcac acatcagact aataaatcgg gaagcataat tttcttcacc cctgattatt
     1381 ctccagggca tcaaccagcg gcttacccgg gacactgaag gaagtctgac ggcagtagta
     1441 accgatgggt tccagccttt acgccatttg gcaaccgcat ccctgacgat ggtttcactg
     1501 cctgtaaatc cccgggccac catttcccgc catatccggc tggcgttata attaccactt
     1561 tctcgttgct cttttaacca ctccctccat gggtcagaag tggcacactg aatttggcca
     1621 cctgaacaga ggtgatatgc tcacctcaga acaacacagg tgctccaatg aaaaaaagaa
     1681 attttagcgc agagtttaaa cgagaatccg ctcaactggt tgttgaccag aa
//
LOCUS       DAPGWB010000325         1703 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.330, whole genome shotgun sequence.
ACCESSION   DAPGWB010000325 DAPGWB010000000
VERSION     DAPGWB010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.330"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..1274
                     /locus_tag="RHX79_004727"
     CDS             <1..1274
                     /locus_tag="RHX79_004727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HDV2199789.1"
                     /translation="HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR
                     KPQVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRVETATGEQAKTQRRSLADTL
                     QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV
                     YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ
                     QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG
                     HLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYT
                     LYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDI
                     NKPDGPATAGIDDLGEILAKMKQRTSRGIRK"
     gene            1271..>1703
                     /locus_tag="RHX79_004728"
     CDS             1271..>1703
                     /locus_tag="RHX79_004728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199790.1"
                     /translation="MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFP
                     VLNNKAMWRWYQNEDIGEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGT
                     LQELINTAEKTAFLGDRFRSYIRAGIYQKKSSDPVQLLAVLD"
BASE COUNT          483 a          391 c          462 g          367 t
ORIGIN      
        1 tgcactacac gcggacacaa tatgcagagc cgctggtcga aagccgctat ctttacgacc
       61 cgctgggccg cagggtggca aaacgggtgt ggcgacgtga acgggacctg acgggctgga
      121 tgtcgctgtc acggaaaccg caagtgacct ggtacggctg ggacggcgac cggctgacca
      181 cgatacagaa cgacaggagc cgcatccaga cgatttatca gccggggagc ttcacgccac
      241 tcatcagggt tgaaaccgcc accggtgagc aggcgaaaac gcagcgccgc agcctggcgg
      301 atacccttca gcagtccggc ggcgaagacg gtggcagtgt ggtgttcccg ccggtgctgg
      361 tgcagatgct cgaccggctg gaaagtgaaa tcctggctga ccgggtgagt gaggaaagcc
      421 gccgctggct ggcatcgtgc ggcctgacgg tggagcagat gcaaaaccag atggacccgg
      481 tgtacacgcc ggcgcgaaaa atccacctgt accactgcga ccatcgcggc ctgccgctgg
      541 cgcttgtcag cacggaaggg gcaacagaat ggtgcgcaga atacgatgaa tggggcaacc
      601 tgctgaatga agagaacccg catcagctgc agcagcttat ccgcctgccg gggcagcagt
      661 atgatgagga gtccggcctg tattacaacc gccaccgcta ttatgacccg ctgcagggga
      721 ggtatatcac tcaggatccg attgggctga aggggggatg gaatttttat cagtatccgc
      781 tgaatccggt tcagtatata gattcaatgg gactggcatc aaaatatgga cacttaaata
      841 atggcggata tggagcgaga cccaacaaac cgcctacgcc cgatccaagt aaattgccgg
      901 acatagcgaa acaattaaga ctgccatatc ctattgacca ggccagtagt gcgcctaatg
      961 ttttcaaaac attcttcaga gcattaagcc cttacgacta cacactgtat tgcaggaagt
     1021 gggtaaaacc aaatctgact tgtacgccac aggatgattc ccagtatcca gggatggata
     1081 caaagacagc aagtgattac ctgccacaga caaattggcc aacaactcaa ttaccaccag
     1141 gatatacttg tgcagaaccc tatttattcc cagacattaa taaacccgat gggccagcaa
     1201 cagcagggat agatgatttg ggtgaaattt tagctaagat gaaacagaga acatcgagag
     1261 gaataagaaa atgaaaagag ttttgttctt tttgctgatg atatttgtta gttttggtgt
     1321 tatagctgat tgcgaaatac aagctaaaga tcatgattgt tttactattt tcgctaaggg
     1381 tactattttt tccgcgtttc ctgtcttaaa taataaagcc atgtggagat ggtatcagaa
     1441 tgaggacatc ggtgagtatt attggcaaac agaactgggt acatgtaaaa ataataaatt
     1501 cacaccaagc ggggcgagac tcttaattcg cgtcgggtca ctacgcctta atgaaaatca
     1561 tgccatcaaa ggaacgttgc aggagttgat aaatacagca gaaaaaacgg cgtttctcgg
     1621 cgatcggttt agaagttata taagagcggg tatctatcaa aaaaagagca gtgatccagt
     1681 tcagttgttg gcagtccttg ata
//
LOCUS       DAPGWB010000326         1674 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.331, whole genome shotgun sequence.
ACCESSION   DAPGWB010000326 DAPGWB010000000
VERSION     DAPGWB010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.331"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..1178)
                     /locus_tag="RHX79_004729"
     CDS             complement(<1..1178)
                     /locus_tag="RHX79_004729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001548650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 127 protein"
                     /protein_id="HDV2199791.1"
                     /translation="MIFFNDIKPTGWLKNKMEWYMNGHIGELDKLVPHLITEHKIYGR
                     DRITPRTVSAEDGVIKKQNNLDDNMMQYYWWDSETQSNWKDGYCRSAYLLDNKEWQEK
                     ANDLCLELIDTQDDDGYIGIYDSSLKFNCKAENGEFWAQATALRFVLGCYESTRNESL
                     LTSLTQAAQCIMAGYPKETSHPFVVEQGFAGHSHGLTITDVFYRLYEITNNIEYLSYC
                     LWLYEDYSAGCVSEQDLQYKNVIDPGYLLKGHGVHTYEHIRALAIAASQRPQYQTALD
                     IFLSQLKYYLTPSGAPIGDEWITGRTANATYTGYEYCSVHELFSTYVMLIKLTTNIGL
                     ADDAEWLFYNASFGMQHPILHAIMYCKTDNCYEANERKHPDSNQFNTRYKYSPTHEEA
                     A"
     gene            complement(1267..>1674)
                     /locus_tag="RHX79_004730"
     CDS             complement(1267..>1674)
                     /locus_tag="RHX79_004730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000581608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199792.1"
                     /translation="NTDFDLHFLKNEICEALNRHVRVIVFSFNKLITPDPRVELYYRF
                     NHEEEYYPSHRFMLVVDMKTVMVFSQRAESLGLYSNNRLLINIIAEHIHSDIYLTKYQ
                     QQYPDANALINTLHESGNDMVQDEKHLSDSKNR"
BASE COUNT          526 a          329 c          296 g          523 t
ORIGIN      
        1 gcagcctcct catgagtagg ggagtattta tatctggtat taaactgatt actgtccgga
       61 tgtttccttt catttgcttc ataacaatta tcagtcttac agtacattat cgcgtgaagt
      121 atgggatgct gcatgccaaa actagcatta tagaatagcc actcagcatc atcggccaga
      181 ccaatattag tggtcagttt tattaacata acataagtgc taaatagttc atgaacagaa
      241 caatattcat agcctgtata agtggcatta gctgtgcgtc ctgtaatcca ctcatcacca
      301 atgggagcgc cagatggtgt aagataatat ttcaactggg ataaaaaaat atctaatgca
      361 gtttgatact gcggccgttg gctcgctgcg atggctaatg ccctaatatg ctcatacgta
      421 tgtacgccat gacctttaag aaggtaacca gggtctatga catttttata ttgcagatct
      481 tgctccgaca cgcatcctgc ggaataatct tcatacagcc acaagcaata tgagagatat
      541 tcaatgttat tggttatttc ataaaggcgg tagaaaacat ctgttattgt taatccgtgg
      601 ctatgtccag caaaaccctg ttccacaacg aaaggatgtg acgtttcttt agggtagcca
      661 gccataatgc attgtgcggc ttgggtaaga gaagttaata aactctcatt acgggtggac
      721 tcataacatc caagcacaaa acgcaaggca gtagcttgtg cccagaactc tccgttttct
      781 gctttacagt taaattttaa tgatgaatca taaattccaa tgtagccatc atcatcttgc
      841 gtatcgataa gttccaaaca taaatcgttc gctttttcct gccattcttt attatctaac
      901 aagtaggcac tgcggcaata tccatccttc caattcgatt gagtttcact atcccaccaa
      961 taatattgca tcatgttatc atcgagatta ttctgttttt taataacgcc atcctcagca
     1021 gatacagtgc gtggagttat acgatctctt ccatatattt tatgctccgt aataagatgg
     1081 ggaactaatt tatccagttc tcctatatga ccgttcatat accattccat cttattcttt
     1141 aaccaaccag tgggctttat atcgttaaaa aaaatcataa atataccttt gcataaaaaa
     1201 gtttagacgt tataaaagac aaatagattg tgatcgccta cagacgatca caatgaaagg
     1261 aaaatattaa cggtttttgc tatcactcaa atgtttttca tcctgcacca tatcattgcc
     1321 agattcatgc aaagtattta ttaatgcatt ggcatcagga tattgttgct gatacttggt
     1381 tagatatata tcactatgga tatgttcggc aattatattg ataagcaagc gattattcga
     1441 gtataacccc agtgattcag ctcgttgtga aaaaaccatt actgtcttca tatcaacaac
     1501 aagcataaaa cgatgagaag ggtaatattc ttcttcatgg ttaaaacggt aatatagctc
     1561 tacgcgtggg tcaggagtaa taagtttatt aaatgaaaaa acaataactc gaacatgtcg
     1621 attcagagcc tcacaaattt catttttcaa aaaatgtaag tcaaaatccg tgtt
//
LOCUS       DAPGWB010000327         1628 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.333, whole genome shotgun sequence.
ACCESSION   DAPGWB010000327 DAPGWB010000000
VERSION     DAPGWB010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.333"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(92..316)
                     /locus_tag="RHX79_004731"
     CDS             complement(92..316)
                     /locus_tag="RHX79_004731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000743213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199793.1"
                     /translation="MKKPNQDDEPFFITEEIAAEMIAGGYEFELPPIPCTIRLRDVLE
                     RMTDAELALQPGEIADQERERCRRKPCSTS"
     gene            complement(313..1050)
                     /locus_tag="RHX79_004732"
     CDS             complement(313..1050)
                     /locus_tag="RHX79_004732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001370723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDV2199794.1"
                     /translation="MRRTKPVAAPMVARVYLRVSTDAQDLERQEAITTAAKAAGYYVA
                     GIYREKASGARADRPELLRMIGDLQPGEVVIAEKIDRISRLPLPEAERLVASIQAKGA
                     RLAVPGVVDLSDLAAEAQGVAKIVLEAVQIMLFRLALQMARDDYEDRRERQRQGIELA
                     RQAGRYKGRRADPKRRAQVVALRKSGYSINKTAELAGYSAAQVKRIWAEVSQAEAKQH
                     GAFVEDALTEADALAAVGQDERQEERA"
     gene            1377..>1628
                     /locus_tag="RHX79_004733"
     CDS             1377..>1628
                     /locus_tag="RHX79_004733"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199795.1"
                     /translation="MRRCSSEAKKNRLGVSEAASLHAVQGGRNRAGDQGGKPRGLMCS
                     SATLAGFFDLSDASGPPWALLDLLLLFLDVLLLLVLLLVA"
BASE COUNT          264 a          518 c          522 g          324 t
ORIGIN      
        1 actcgattgt aaacaagcac acaaaaccct ttagtgacaa caatttgcaa gaactatcag
       61 gctcagtgcc atgaaaaata ccatgaccag atcatgaggt tgaacacggc ttgcgccggc
      121 agcgttcacg ctcctggtcg gcgatctcgc ccggctgcaa tgctagctca gcatcggtca
      181 tgcgctccag cacgtcgcgt aggcggatgg tgcaaggaat gggcggcagc tcgaactcat
      241 agccgccggc gatcatttcg gccgcaatct cctcggtgat gaaaaacggc tcgtcgtctt
      301 ggttcggctt cttcatgccc tttcctcctg gcgctcatcc tggccgacag cggccagggc
      361 atcggcttcc gtcaatgcgt cctccacgaa cgcgccgtgc tgcttcgctt cggcctggct
      421 gacctcggcc catatccgtt tcacctgggc cgcactgtac ccggccagct cggcggtctt
      481 gttgatgctg tagccggact tgcgcagcgc gacaacttgg gcgcggcgct tcggatcagc
      541 acggcggccc ttgtaccgcc cggcctggcg ggccaactca atgccttggc gctggcgttc
      601 gcgcctgtcc tcgtagtcgt cgcgggccat ctgcaaggcc aggcgaaaaa gcatgatctg
      661 cacggcttcc agcacgatct tggcgacgcc ctgggcctcg gccgccaggt cggatagatc
      721 gaccacgcca gggacggcca ggcgtgcgcc tttggcctgt atcgaggcca ccaggcgctc
      781 ggcctcgggc aaaggtaggc ggctgatgcg gtcgatcttc tcggcaatga ccacctcgcc
      841 gggctgtagg tcgccgatca tgcgcagcag ctcaggccgg tcggcgcgtg cgccggatgc
      901 cttctcacgg tagatgccgg cgacgtagta gccggcggcc ttcgcggccg tagtgatcgc
      961 ctcttggcgt tccaagtcct gcgcgtcggt gctgacgcgc agatagaccc gcgccaccat
     1021 cggcgcggct actggcttcg tcctgcgcat acttgcgggc tcctttgggc atacgcaaag
     1081 tgtccggtca tgctaccccc ggccaaaaag gccgtcatgc gatttatctt ggccgggtcg
     1141 ttattggcgg gtctaaatgg ccgctccgtg gatctcatcg ccagaaatgg cgatgcgaga
     1201 tccagggcag ggcggccgcc atcgtcagac ctggcgatgg tcgacgccgg cgcgcatcgt
     1261 cggatgtggc gatgcgagct cgaggtcggt ggccaccgcc ggcgacctgg tgccatcgtc
     1321 ggcaatggcg atgctgcagc tcgacgtgcg cggcctggtc gtctcggcat cgtcggatgc
     1381 ggcgatgctc gagcgaggcg aaaaaaaacc gcctcggggt gtccgaggcg gcaagtctgc
     1441 atgcggttca gggaggaaga aaccgcgccg gcgatcaggg aggaaaaccg cgcggcctga
     1501 tgtgcagctc ggccacttta gccggatttt tcgacttatc cgatgcgagc ggcccgccgt
     1561 gggcgctgct cgatctgctg ttgctttttc tcgacgtgct tctgctcctg gtgctgctgc
     1621 tcgtcgcg
//
LOCUS       DAPGWB010000328         1623 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.334, whole genome shotgun sequence.
ACCESSION   DAPGWB010000328 DAPGWB010000000
VERSION     DAPGWB010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.334"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            9..1202
                     /locus_tag="RHX79_004734"
     CDS             9..1202
                     /locus_tag="RHX79_004734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV2199796.1"
                     /translation="MSPGIEDTPQKPLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTN
                     LSLSVWAALLMLGSMLFLPSSPWWGKQISRTGSKPVVLWALGGYGISFTLLGLGSVLM
                     ATSAITTAVGLGILIIARIAYGLTVSAMVPACQVWALQRAGEGNRMAALATISSGLSC
                     GRLFGPLCAAAMLAIHPLAPLGLLMAAPVLALLMLLRLPGTPPQPTPERKSVSLKRDC
                     LPYLLCAILLAAAVSMMQLGLSPALTRQFATDTTAISQQVAWLLGLSAVAALIAQFGV
                     LRPQRLTPVALLLSAGVLMSGGLAIMLSEQLWLFYPGCAVLSFGAALATPAYQLLLND
                     KLADGAGAGWLATSHTLGYGLCALLVPLVSKTGVAIALIMAALFATILFTIVSVFIWH
                     YRAIK"
BASE COUNT          344 a          416 c          472 g          391 t
ORIGIN      
        1 acattaaaat gtcacctggg atcgaagata cgccccaaaa accactgtcc tgctggccac
       61 ttgcgttcag tgccgggctt ctcggtatcg ggcagaacgg tctgctggtt gtgctccctg
      121 ttctggtcat acagacaaat ctgagtctgt ctgtatgggc tgccctgctg atgcttggct
      181 caatgctgtt tctgccatcg tccccgtggt ggggaaagca aatttcccgt actggcagta
      241 aacctgtggt gttgtgggct ctgggaggat atggcataag ctttaccctg ctagggctgg
      301 gaagcgtgct gatggctacc agcgccataa caacagcggt gggactggga atattaatca
      361 tcgcccggat cgcctacggg ctgaccgtgt cggcaatggt gccagcctgt caggtctggg
      421 cattgcagag agcaggagaa gggaatcgca tggccgctct ggcaaccatc agctccggcc
      481 tgagttgcgg caggctattc gggccgctgt gcgcggcagc aatgctggcc attcatcctc
      541 tggcgccact ggggctgctg atggcagccc cagtgctggc gctgctgatg ctgctgcggt
      601 tgcccggcac accaccacag cccacaccgg agcgcaagag cgtcagtctg aagcgggatt
      661 gtctgcctta tctgctttgc gcaatattac tggctgcggc ggtgagcatg atgcagcttg
      721 gactttcgcc tgcccttact cgccagttcg ccacggatac caccgccatt agccaacagg
      781 tggcctggct gttgggtctg tccgcagtag ctgcgcttat cgcgcagttc ggggtactcc
      841 gtccgcagcg cctgactccg gtggccctgc tcctgagtgc cggagtgttg atgagtggtg
      901 gtctggctat catgctctcc gaacagctat ggttgtttta cccgggctgt gcagtgctgt
      961 catttggagc tgctctggca acacccgctt atcaacttct actgaatgat aagctggctg
     1021 atggcgcagg cgcgggctgg ctcgctacca gtcacacact tggctatgga ctgtgcgctt
     1081 tgctggtgcc gctggtatcg aaaacaggtg tcgcaatcgc gctgattatg gcggcattat
     1141 ttgcaactat attatttacc attgtgtctg tatttatctg gcattaccgt gctatcaaat
     1201 aaagatatga tcatcacctt accggagtaa atcagaggat atgagagaga acctgcgtct
     1261 gatgaaagca tgtcaggcag taacactggc aaaaatgcac cgcatggtac agggtatgtt
     1321 cggtataaaa ccggccggtg tcacttaagt tgcattgaag tcatgctggt tgtgagtgca
     1381 acatcacatg gctctgtccg gatgcctgca gacaatgaga acagtgcgat tactcattgg
     1441 gaatgagatg aacgcatccc caacattaga tctggggcac cgtgataaat aaaggggaaa
     1501 atcagagagg tgtcgagcct cgcagatttc cggcatcata gtgcccaata cgggatgcat
     1561 aaaactctct cagagtggcg ttgatacctg aaagagctgg agcgagaaaa tcgtgaactg
     1621 cgc
//
LOCUS       DAPGWB010000329         1623 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.335, whole genome shotgun sequence.
ACCESSION   DAPGWB010000329 DAPGWB010000000
VERSION     DAPGWB010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.335"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..1251)
                     /gene="yiaN"
                     /locus_tag="RHX79_004735"
     CDS             complement(<1..1251)
                     /gene="yiaN"
                     /locus_tag="RHX79_004735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate transporter large permease
                     YiaN"
                     /protein_id="HDV2199797.1"
                     /translation="MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMA
                     QTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAM
                     IMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFG
                     VSSGLSISKLFMAGIAPGMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIW
                     ALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTS
                     VVMFLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTP
                     TVLILTPVLMPLVKEAGIDPIYFGVMFIINCSIGLITPPIGNVLNVISGVAKLKFDDA
                     VRGVFPYVLVLYSLLVVFVFIPDLI"
     gene            complement(1254..>1623)
                     /gene="yiaM"
                     /locus_tag="RHX79_004736"
     CDS             complement(1254..>1623)
                     /gene="yiaM"
                     /locus_tag="RHX79_004736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate TRAP transporter small
                     permease YiaM"
                     /protein_id="HDV2199798.1"
                     /translation="SVDELSRYLFVWLTFIGAIVAFMDNAHVQVTFLVEKLSPAWQRR
                     VALVTHSLILFICGALAWGATLKTIQDWSDYSPILGLPIGLMYAACLPTSLVIAFFEL
                     RHLYQLITRSNSLTSPPQGA"
BASE COUNT          501 a          412 c          408 g          302 t
ORIGIN      
        1 gatgagatcg ggaataaaaa caaatacgac taataatgaa tataaaacca ggacgtaagg
       61 gaaaacgcct ctgactgcat catcgaattt gagttttgcc acccctgaaa taacgttaag
      121 tacattaccg ataggcggtg taattaagcc gattgagcag ttaatgataa acatgacacc
      181 gaaataaatc ggatcgattc ctgcctcttt aactaaaggc attaataccg gggtaagaat
      241 taataccgtc ggcgttaaat ccatgaccat gccgacaatc aggatagcca ccataatgac
      301 gataaacagc agacgcggtg aatcgaccaa cggttgcagt aaatcagaaa ccatcatcgg
      361 cagttcagca atggtaatca gccaggcgga aacttgtgcc gaggccacca gaaacataac
      421 cactgaggtg gttttcgccg cgccaatgag tacatgccaa agtgtggcga aggtcatttc
      481 acggtaaata actgtggcga caaacagcgc atagaaagca gcaacggccc cggcttcggt
      541 aggggtaaac agaccggagc gaaacccgcc aataatgatg actggaagaa acagcgccca
      601 gataccggag acaaaagagt gccagatttc ctgcatcgtt gctttttgct ggcggggtaa
      661 attaaggcga ctggcctgcc accaccaggt aagcatcagc gttgcgccca tcatcatgcc
      721 aggggcaatg cccgccataa acagcttact gatggataat ccgctggaaa cgccgaagat
      781 aataaacgga atggaagggg gaataattgg cgcgataatg ccgccagagg caatcagccc
      841 cgccgcccgg ttgaccgggt agttggcgct gcgcatcatc ggcaccagta gagcggcaac
      901 ggcggcggta tccgcaacgg cagaaccaga aaggctcgcc ataatcatag ctgccagcac
      961 gccgacgtag cccagcccgc ctggtttatg ccccaccagt ttcatcggca ggtcaacaat
     1021 gcgttttgac aagccgcccg cattcatgat ttcacccgcc agcacaaaga acggaatcgc
     1081 cagcagggag aagctatcgg ctccgttcac cagcgtttgt gccatgatct ggacatcaaa
     1141 catgtccagc cagaacatta acgccgcccc gcacaacaac agtgcccagg caataggcaa
     1201 accgatagca ataccaccca acagacagcc cagaaaaatc agcacagcca tgattaagct
     1261 ccttgcggtg gcgacgttag agaattgcta cgcgtgatga gttgatataa atgacgcagt
     1321 tcaaagaatg cgataacgag gctggtgggc agacaagcgg catacatcag gccgatgggt
     1381 aaaccgagga tcggtgaata atcgctccag tcctgaattg tttttagcgt tgcgccccag
     1441 gccagtgcgc cacaaataaa taagattaag gaatgggtaa ccagagcgac tcgtcgttgc
     1501 catgcggggg agagtttctc caccagaaag gtgacctgaa cgtgggcgtt atccataaaa
     1561 gccacaatcg cgccaataaa tgttaaccag acaaataaat aacgtgacaa ttcatctaca
     1621 gat
//
LOCUS       DAPGWB010000330         1619 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.336, whole genome shotgun sequence.
ACCESSION   DAPGWB010000330 DAPGWB010000000
VERSION     DAPGWB010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.336"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            12..521
                     /locus_tag="RHX79_004737"
     CDS             12..521
                     /locus_tag="RHX79_004737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000759160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDV2199799.1"
                     /translation="MKKWMLAICLMFINEICQATDCFDLAGRDYKIDPDLLRAISWKE
                     SRYQVNAIGINPVTGYGSGLMQVDSQHFNELARYGIKPEHLTTDPCMNIYTGAYYLAI
                     AFKKWGVSWEAVGAYNAGFRKTERQNQRRLAYASDVYRIYTGIKSSKGIRIPATKKSL
                     PEINSVQNN"
     gene            complement(817..1619)
                     /locus_tag="RHX79_004738"
                     /pseudo
     CDS             complement(817..1619)
                     /locus_tag="RHX79_004738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001234456.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DUF945 domain-containing protein"
BASE COUNT          475 a          386 c          335 g          423 t
ORIGIN      
        1 gaggtggaaa aatgaaaaag tggatgttag ccatctgcct gatgtttata aatgagatct
       61 gccaggccac tgattgcttt gatcttgcag gccgggatta caaaatagat cctgatttac
      121 tgagagcaat atcatggaaa gaatcccgtt accaggttaa tgccatcggt attaatccgg
      181 taacgggata tggcagcgga ctgatgcagg tagattccca gcattttaac gaactggccc
      241 gctacggaat taagccagaa catctgacaa cagatccctg catgaacatt tataccggtg
      301 cttattatct ggcaatagca tttaaaaaat ggggcgtctc ctgggaggcc gttggtgcat
      361 acaatgccgg attcaggaag accgaacgcc agaaccagag acgtcttgcc tacgcatcag
      421 atgtttaccg gatttatacc gggataaaaa gcagtaaagg tatccggatt ccggccacga
      481 agaaatcact tccggaaatt aacagcgtgc agaacaatta atcttacaga cattgtcaga
      541 tacctgttat gccgcaaaag cggcatggaa ggccacacac aaaaatatca tatgagtgac
      601 aatactgact ggccgaagcc ccgcgaagcg ggaacccatc ttatatatac ccggtaactg
      661 cgcagcctcc tgccagacca tttttcgcgg gcacaatatt tacagacaac cggaaagcca
      721 gttgatgaaa ttgaggtata tcagacgaca cagcgatgcc gaagaatgat aatataagta
      781 aagccccgaa aaattttcgg ggctttactt atattatcat gacttccact ttctgaactg
      841 ttcggcaatc acccataacg ccttgttgat tcttatatca ccatcaatac ctgtaatgac
      901 tcttgtcctg gtatttttcc cggaggcact tcgcccagat aatccacctt ttatcatatt
      961 ctcctgaacc cgctgccagg ttgtccagag atcgttctgt ttatcctccc gacgacgggg
     1021 agtaattatt tattcaggcg tcactggcgt tttattttca tcttcatacc tgaccatcag
     1081 tgcagctctg ccaaataaat gttgctcgtc actgttaaga tgaatttctt tcattgcctc
     1141 catattatca gtgaccttat caaagacacc gagtacttca tacgcaccct cgataacctg
     1201 cccgacaata tcacctttat gtggaacgcg gatttcgcca aaattatttc cgcacaccag
     1261 gccatttgtg cagacaaaac gaaaaattcc ggggttcatc tgataactgg atgaaccatc
     1321 atgtgaatta agcaggataa tttcaggaac ttcctgcccg ttaatatgcc cttccctgcg
     1381 aagacgtaac atatgtttac tgtattcgcg acgtcccaaa tcacgaaccc gactctgaca
     1441 ggcaaagaat ggctggaaac cttcatcacg taacttattg atgatattga ttgttggaat
     1501 atacgtataa cgttcactcc gggactcatg tttatcaccg gaaaataccg aaggcacgaa
     1561 ctgcattaat tcatcatccg ttaaaggacg ttcacggcgg atggaattat accgaccaa
//
LOCUS       DAPGWB010000331         1605 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.337, whole genome shotgun sequence.
ACCESSION   DAPGWB010000331 DAPGWB010000000
VERSION     DAPGWB010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.337"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            22..1137
                     /locus_tag="RHX79_004739"
     CDS             22..1137
                     /locus_tag="RHX79_004739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase family
                     protein"
                     /protein_id="HDV2199800.1"
                     /translation="MLRRENQGDLFDDQVVLPSLESVLTGISSSQRCDDRTTYFSAPD
                     VDLSLYDHIIVCLSGGKDSIAAYLRLVDMGVDKSKVEFWHHDVDGQEGSSLMDWAFMR
                     DYCRQLGEELGIPMYFSWLEGGFEGEMLKDNAYSHPHRVETPEGLLVLPRDHKRSKPG
                     TRLRFPQQSPSLQTRWCSSALKIDVGRRALNNQERFKGKKILFITGERREESANRSKY
                     NQLEAHACDRRYGKTARLVDAWRPVLHWTEEEVWEVIERHRILAPVPYRLGWSRSSCM
                     TCIYNSQRIWSTIRHYWPERAGKIAQYEQTFGVTVSRKKIDVIDLGSAVAPIQISDVE
                     ALEQVSREDYTLPIFVPEGQKWVLPGGAFGREACGSD"
     gene            1155..1589
                     /locus_tag="RHX79_004740"
     CDS             1155..1589
                     /locus_tag="RHX79_004740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199801.1"
                     /translation="MLDFVFLVFLGLGISTVLVRRSSRKGMDLELTWLQSLKVVLVRG
                     AVALGLGFGIGRLVLMGMQYGFLSESVLREHALVSVAVVLICGLGSFVAFQWIIGRIS
                     GRSISVVSVIKAVMYESGYFVLSMLILLVILVLFGLAYETFF"
BASE COUNT          340 a          335 c          482 g          448 t
ORIGIN      
        1 gtaaagaaaa aagagcgact tatgttgaga cgagaaaacc aaggagattt gttcgatgac
       61 caggtggtgt tgccatcact ggagtcggtt cttaccggca tatcttccag tcagcgttgt
      121 gacgatagaa caacgtactt ctccgctccg gatgtggacc tgagtttgta cgatcacatc
      181 attgtttgcc tgtctggagg caaagactcg attgctgcgt acttgcggct ggtggacatg
      241 ggtgttgata agtcaaaggt ggagttctgg caccatgatg ttgatggtca ggaaggcagt
      301 tcgttgatgg attgggcctt catgcgtgat tactgtcgtc agctcgggga agaactgggt
      361 atcccaatgt acttctcgtg gcttgagggc ggctttgagg gcgaaatgct caaagacaat
      421 gcctatagcc acccccatcg tgtagagacg cctgaggggc ttctggtgct gcctagagac
      481 cataagcgct ctaagcctgg tacgcgcctt cgtttccctc agcaatcgcc atcactccaa
      541 acaaggtggt gctcatcagc cttgaagatc gatgttggcc gcagagctct taataaccag
      601 gagcgcttca aggggaagaa gatccttttc atcactggtg agcgccggga ggaaagtgca
      661 aacagatcca agtacaacca gcttgaggct catgcctgtg acagaagata tgggaagact
      721 gcacggttag ttgatgcctg gaggcccgtt cttcattgga ctgaggagga ggtatgggaa
      781 gtaatcgagc gtcaccgcat cctggcccca gtcccttatc gccttggctg gagccggtcg
      841 tcgtgtatga cctgcatcta caactcacag cgtatctggt ccacgatccg tcactactgg
      901 cctgaacgag ctgggaaaat tgctcagtat gaacaaacct ttggtgtgac ggtatcaaga
      961 aaaaaaatcg acgtaataga tttaggttct gctgttgcgc cgatacagat tagtgatgtt
     1021 gaggcattgg agcaggtatc cagagaagat tacacgctcc cgatttttgt gccggagggg
     1081 cagaagtggg ttctccctgg tggcgcattt ggccgagagg cctgtggttc tgattgattt
     1141 gtgcagaggt ggcaatgttg gattttgttt ttttggtgtt tttggggttg ggcatatcta
     1201 cggtgctggt gcgtcggtct tcccgtaagg ggatggatct tgagctgaca tggctccagt
     1261 cgttgaaggt cgtgctggtt cgtggagctg ttgcattggg cctgggtttt ggcattggca
     1321 ggcttgtatt gatggggatg cagtatggtt tcctgagtga gtctgtcctg agggaacatg
     1381 cacttgtctc cgtagcggtg gttctgatct gtgggcttgg ttcgttcgtt gcgtttcagt
     1441 ggatcatcgg gaggatctct ggaagatcga tcagcgtcgt ttctgtgatc aaagctgtga
     1501 tgtacgagtc tggttacttt gtgctgtcga tgcttatctt gttggtgata ctcgtcctgt
     1561 tcggccttgc atacgagact tttttctaaa aaaacagtgt tgatt
//
LOCUS       DAPGWB010000332         1599 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.338, whole genome shotgun sequence.
ACCESSION   DAPGWB010000332 DAPGWB010000000
VERSION     DAPGWB010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.338"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            29..517
                     /locus_tag="RHX79_004741"
     CDS             29..517
                     /locus_tag="RHX79_004741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001461083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosidase"
                     /protein_id="HDV2199802.1"
                     /translation="MKNKLLIAAVLTGLLSGCVDGNSPSGSQEGVVKADPRYSECNLP
                     DVNERGPIAAGLYISGTLPEGYWLMKPERKMHYKGDGIYQLIYSEKAGAVTMQFATMN
                     WNPQFTVTGLELPLNQAKTLKKGGMDKNTKVVIPADGKYVWTIQIGPDKKAIAAMVAP
                     CK"
     gene            600..>1599
                     /gene="ugpC"
                     /locus_tag="RHX79_004742"
     CDS             600..>1599
                     /gene="ugpC"
                     /locus_tag="RHX79_004742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000741720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HDV2199803.1"
                     /translation="MAAVILRKVEKIYDNGFKAVHGIDLDINDGEFMVFVGPSGCAKS
                     TTLRMIAGLEDVSGGEIYISDRLVNTLPPKDRSIAMVFQNYALYPHKTVFDNMAFGLK
                     MQKRPKEEIKKIVEEVAEKLEISDLLYRKPKEMSGGQRQRVAVGRAIVRKPDVFLFDE
                     PLSNLDAKLRVSMRVKIAQLHQSLKDEGHPATMIYVTHDQIEALTLGDRICVLNQGRI
                     MQVDTPVNLYNHPANRFVAGFIGSPSMNLIDAVVREEDGKLYIDIAKNIRLYIPENKQ
                     SVLKAYIDKPVCFGIRPEHISLSVNCKEMNTVTGALSIIENMGSEKYLYFTVNNKEF"
BASE COUNT          493 a          292 c          350 g          464 t
ORIGIN      
        1 agctatacta cttttattga gagtttaaat gaaaaataaa ttgcttattg cggctgtgtt
       61 gactggtctt ctttcaggat gcgttgatgg caattcaccc tctggcagtc aggaaggtgt
      121 cgtgaaagcg gatcctcgct attcagaatg taacctccct gatgtaaatg aaagagggcc
      181 aattgctgcg ggtctttaca tttccggaac cctcccggaa ggctattggt taatgaagcc
      241 agagcgtaaa atgcattata agggagatgg tatttatcag cttatttatt ctgaaaaagc
      301 aggtgcggta acaatgcaat ttgcgactat gaactggaac ccgcagttca ctgtaacagg
      361 tcttgaattg ccattaaatc aggctaaaac actcaagaaa ggaggcatgg ataaaaatac
      421 aaaagtcgtc attcctgccg atggaaagta tgtttggaca attcaaattg gtcctgataa
      481 aaaggcaata gccgccatgg tagcaccatg taaatagtta tttttagcac tccactattc
      541 aacattcgtt gaatagtgga gtatcagtat tccaaaattc ttgttaatga gagcagatta
      601 tggccgcggt aattctacgc aaagttgaaa aaatttatga caatggattc aaagctgttc
      661 acggcattga tctcgatata aacgatggtg aattcatggt ttttgttgga ccatctgggt
      721 gtgccaaatc aactacatta cgcatgattg caggtcttga agacgtatca ggtggtgaaa
      781 tttacattag cgaccgcctt gttaataccc ttccgcctaa agatcgcagc attgcaatgg
      841 tgttccagaa ctatgcgctg tatccccata agactgtatt tgacaatatg gcttttggtt
      901 taaaaatgca aaaaaggcca aaagaagaga ttaagaaaat tgtcgaagaa gttgcagaaa
      961 aacttgaaat tagcgattta ctttaccgaa aaccgaaaga aatgtcgggt ggtcagcgtc
     1021 agcgtgtcgc ggtaggccgt gcaattgtcc gtaagccaga tgttttctta tttgatgagc
     1081 cactatctaa ccttgatgcg aaacttcgtg tttcaatgcg agtcaaaatt gctcagttgc
     1141 atcagtctct caaggatgag ggtcatccag caaccatgat ttatgttaca cacgatcaaa
     1201 ttgaagcatt gaccctcggt gatcgtattt gtgtgcttaa tcaggggcga ataatgcagg
     1261 tcgacacacc agttaatctg tataaccacc ctgctaacag attcgttgct ggctttattg
     1321 gttccccgtc aatgaatttg atagatgcgg ttgtacgtga ggaagacggt aaactctata
     1381 ttgacattgc caaaaatatt cggttgtaca tacctgagaa taaacaatca gtactcaaag
     1441 cgtatataga taaacccgtt tgttttggta ttcgtccaga acatatctct ttgagtgtga
     1501 attgcaaaga aatgaataca gtcactggtg cattaagtat tattgaaaat atgggcagtg
     1561 aaaaatatct ttactttacc gttaacaaca aagagttta
//
LOCUS       DAPGWB010000333         1592 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.339, whole genome shotgun sequence.
ACCESSION   DAPGWB010000333 DAPGWB010000000
VERSION     DAPGWB010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.339"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(27..773)
                     /gene="traX"
                     /locus_tag="RHX79_004743"
     CDS             complement(27..773)
                     /gene="traX"
                     /locus_tag="RHX79_004743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858383.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer pilus acetylase TraX"
                     /protein_id="HDV2199804.1"
                     /translation="MTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLM
                     VLDHINLIFQLKQEWMFLAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQF
                     AYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAG
                     LLMLAVSYRLYRAEDRAERLALLACLLAVIPALNLASSDAAAVAGLVMTVLTVGLVSC
                     AGKSLPRFWPGDFFPVFYACHLAVLGVLAL"
     gene            complement(793..>1592)
                     /locus_tag="RHX79_004744"
     CDS             complement(793..>1592)
                     /locus_tag="RHX79_004744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001463032.1"
                     /note="cleaves origin of transfer and unwinds; oriT
                     relaxase; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="conjugative transfer relaxase/helicase TraI"
                     /protein_id="HDV2199805.1"
                     /translation="RDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRN
                     GKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVR
                     IARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDSSVQPGAGNGEPVTAEVLAQR
                     QAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRADITEREAALP
                     ESVLRESQREQEAVREVARENLLQERLQQIERDMVRDLQKEKTLGGD"
BASE COUNT          329 a          550 c          395 g          318 t
ORIGIN      
        1 cagaatcagc gtcagtatca taccagtcac aacgccagaa cgcccagcac agccagatga
       61 caggcgtaga ataccgggaa aaaatccccg ggccagaaac ggggtaatga ttttcctgca
      121 cacgacacca gaccaacggt cagcaccgtc attacaagac cggccaccgc cgctgcatca
      181 ctggaggcaa ggttaagtgc cggaataacg gccagcaggc atgcaagcag cgccagacgt
      241 tccgctctgt cttccgcccg gtacagtcgg taactgaccg ccagcatcag cagcccggca
      301 atgccgtaac tggtgccgga caaaggcccc cacagggcca tcagaagaat ggccgctgct
      361 gtacgccacc cactgcgcgt ttcacaccac gtcagcacct gtgccgccac tgcaaaggca
      421 aacaggatat tcccctcata ccagggaaag ccggccagat aatatgcgaa ctgggcaata
      481 attccccatc cccacagccg gttaatggcc ggttgccgga tatgcgcatg acgggacaga
      541 ttcagccccc acaccagggc aaacagcgga aaggctcctc gcccggccag aaacatccat
      601 tcctgcttca gctggaatat cagattgatg tggtccagta ccatcagcac cagcgccacc
      661 gttttgatga tatcccgctg tccgggtgac cagaccagaa acgactgcaa ccaggtatcg
      721 gtccgtgcag ccagtgaatc gttacgtgtc gtgttcgtgt tatccgttgt catcagcgtt
      781 tatcttcctg tatcagtctc cgcccagggt tttctctttc tgcaggtcac gaaccatatc
      841 ccgctctatc tgctgcagac gctcctgcag cagattttcc cgggcaacct cccggaccgc
      901 ttcctgctcc cgttgtgatt cacgcagcac actctccggc agcgcggctt cccgttcagt
      961 tatgtcagcc cggtcacgct cctgcccggc aatttccctg acagcctgct ctgttttgcc
     1021 atccggcagg tcaggtttgt tctctgccat tttacggaca atttcatctg cacggcgttc
     1081 cgtttcacgg cggatggcct cttcagcctg ccgctgtgcc agcacctctg ccgtgaccgg
     1141 ttcgccattt ccggctcccg gctggacgct gctgtccggg atatcccccc acacgcgacc
     1201 accggtgatg gcaccgggat tccacggacg accttcaccg gcaattctta ccaccacacc
     1261 gctgtcagga ttatcacggg caatccggac accatcctgc atattatcag ccagcaggct
     1321 ctctccgtta cggctaccct gcagggccac gaactgcgca tccccgctgc ctttcacccg
     1381 tccttcaccg ctgaatcccc gcagcccgtt tccgtcatcc gtggtcagtg ggttcagcca
     1441 gataccggcg gacttgccgt tacggtcaaa cgccggcagt gccacatacg gctgcggata
     1501 tttacgtccc ggtgcaataa accgtgcagg gctgtctccc ccggccagcc ctgcctgacg
     1561 gagaacggca cggcctgccg ccacgtcccg ca
//
LOCUS       DAPGWB010000334         1581 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.340, whole genome shotgun sequence.
ACCESSION   DAPGWB010000334 DAPGWB010000000
VERSION     DAPGWB010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.340"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(165..818)
                     /gene="ribB"
                     /locus_tag="RHX79_004745"
     CDS             complement(165..818)
                     /gene="ribB"
                     /locus_tag="RHX79_004745"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HDV2199806.1"
                     /translation="MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMI
                     FPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAA
                     EGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDL
                     MTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS"
     regulatory      complement(922..1070)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            1192..1482
                     /gene="ubiK"
                     /locus_tag="RHX79_004746"
     CDS             1192..1482
                     /gene="ubiK"
                     /locus_tag="RHX79_004746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis accessory factor UbiK"
                     /protein_id="HDV2199807.1"
                     /translation="MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRQTLQAQLTRL
                     DLVSREEFDVQTQVLLRTREKLALLEQRMSELENRSTEIKKQPDPETLPPTL"
BASE COUNT          449 a          405 c          351 g          376 t
ORIGIN      
        1 caattatatg attttgatca taatgaaaaa gaatgcctga tattaatgaa attttctcat
       61 agaaagagaa gcggaattaa catcttgcat agcggggcaa aataaaaacc gaagccagct
      121 acaacttcgg tttcttgatt aaggcagtaa ttaagcagcg gttttcagct ggctttacgc
      181 tcatgtgcct gacggtatgc caccaggtct tcaatagtca cgagcgccat attgtgttta
      241 ttggcaaact caatgcactc tggtgcacgc gccatcgtgc catcgtcatt agtcagctca
      301 cacagcacac cagccggttt aaagcctgcc agcgtcatca aatcaatagt cgcttcagta
      361 tgaccgccac gcgtcagtac accacctgcc tgcgcgcgaa gtgggaaaac gtggcccggg
      421 cgattcagat cagaaggttt tgcgccatcg gcaatcgctg cgcgaacggt cgtaatacga
      481 tcagcggcag aaacaccggt agtcacacct tcagccgctt caatggtcac ggtaaaaccg
      541 gtgccatagg cgctggtgtt attttctacc atcattggca gatcaagttg tttacggcga
      601 tcttcagtga tgcacaggca aacaataccg ctaccgtggc gaatggtcag cgccatctgc
      661 tcaacggtca tggtttctgc cgggaagatc atatcgcctt cgttttcacg gtcttcatca
      721 tcaagcacca ttacaccgcg tccttcacgc agcgcagcca gtgcattttc aacacgttcg
      781 aaaggcgtac caaaagagga aagtagcgtc tgattcatgg taaaaaaacc tcactaaaat
      841 tatggttacc agaatcaggg cagtcttagg agtggcggca tatagccaaa ataacgtgag
      901 cgggtccatg cccgacagaa tcgttactct ctcccatccg gactctaacc gtcggccccg
      961 gaattacacc ggatctgctg tcctttgagt tcgcacccaa agcgctcgcg ggctttcaac
     1021 tgagttgatt taccgccggt ggggaatttc gccccgccct gagaataagc ggattcacta
     1081 taacgctaat gattagcggc agcaacgcat agcttcacat aattctggtt tatgacttac
     1141 ccttatcgca ctacaatggc actcaacacc tatcagtaca gggaaactac aatgattgac
     1201 ccgaaaaaaa ttgagcaaat cgctcgccag gttcacgaat caatgcctaa aggaatcagg
     1261 gagttcgggg aagatgtgga gaaaaaaatc cgccaaaccc tacaagctca gctgacgcgc
     1321 ctcgaccttg taagccgtga agagttcgac gtccaaacgc aagtcctgtt acggactcgt
     1381 gagaaactgg cgctgcttga acaaagaatg agcgaactgg aaaatcgcag tactgagatt
     1441 aaaaagcagc cagatccaga gactctcccc ccaacgctgt aaacatttgt ctttaatgca
     1501 ctgtaaatta tgaattaatc ctctaattta cagtgctttc tattacctta tcgcttaatt
     1561 ccattcagaa tatcatcaca a
//
LOCUS       DAPGWB010000335         1576 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.341, whole genome shotgun sequence.
ACCESSION   DAPGWB010000335 DAPGWB010000000
VERSION     DAPGWB010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.341"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            216..1091
                     /locus_tag="RHX79_004747"
     CDS             216..1091
                     /locus_tag="RHX79_004747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A extended-spectrum beta-lactamase
                     CTX-M-14"
                     /protein_id="HDV2199808.1"
                     /translation="MVTKRVQRMMFAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSS
                     GGRLGVALIDTADNTQVLYRGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKP
                     ADLVNYNPIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGD
                     ETFRLDRTEPTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNT
                     TGAASIRAGLPTSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESR
                     RDVLASAARIIAEGL"
     gene            1126..>1576
                     /locus_tag="RHX79_004748"
     CDS             1126..>1576
                     /locus_tag="RHX79_004748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HDV2199809.1"
                     /translation="MKDQITYLPDNADRSVAKQKFKITNWPTYNKALINRGSITFWLD
                     DEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFSLMNVP
                     LRCPDYSCVSRRAKSVNISFKTPTRGEIAHLVIDSTGLKVFGEGEWKV"
BASE COUNT          389 a          393 c          452 g          342 t
ORIGIN      
        1 gtggataact tgcagagttt attaagtatc attgcagcaa agatgaaatc aatgatttat
       61 caaaaatgat tgaaaggtgg ttgtaaataa tgttacaatg tgtgagaagc agtctaaatt
      121 cttcgtgaaa tagtgatttt tgaagctaat aaaaaacaca cgtggaattt agggaatact
      181 gatgtaacac ggattgaccg tattgggagt ttgagatggt gacaaagaga gtgcaacgga
      241 tgatgttcgc ggcggcggcg tgcattccgc tgctgctggg cagcgcgccg ctttatgcgc
      301 agacgagtgc ggtgcagcaa aagctggcgg cgctggagaa aagcagcgga gggcggctgg
      361 gcgtcgcgct catcgatacc gcagataata cgcaggtgct ttatcgcggt gatgaacgct
      421 ttccaatgtg cagtaccagt aaagttatgg cggccgcggc ggtgcttaag cagagtgaaa
      481 cgcaaaagca gctgcttaat cagcctgtcg agatcaagcc tgccgatctg gttaactaca
      541 atccgattgc cgaaaaacac gtcaacggca caatgacgct ggcagaactg agcgcggccg
      601 cgttgcagta cagcgacaat accgccatga acaaattgat tgcccagctc ggtggcccgg
      661 gaggcgtgac ggcttttgcc cgcgcgatcg gcgatgagac gtttcgtctg gatcgcactg
      721 aacctacgct gaataccgcc attcccggcg acccgagaga caccaccacg ccgcgggcga
      781 tggcgcagac gttgcgtcag cttacgctgg gtcatgcgct gggcgaaacc cagcgggcgc
      841 agttggtgac gtggctcaaa ggcaatacga ccggcgcagc cagcattcgg gccggcttac
      901 cgacgtcgtg gactgtgggt gataagaccg gcagcggcga ctacggcacc accaatgata
      961 ttgcggtgat ctggccgcag ggtcgtgcgc cgctggttct ggtgacctat tttacccagc
     1021 cgcaacagaa cgcagagagc cgccgcgatg tgctggcttc agcggcgaga atcatcgccg
     1081 aagggctgta actggttttg ttgaataaat cgaacttttg ctgagttgaa ggatcagatc
     1141 acgtatcttc ccgacaacgc agaccgttcc gtggcaaagc aaaagttcaa aatcaccaac
     1201 tggcccacct acaataaagc cctcatcaac cgtggctcca taactttctg gctggatgat
     1261 gaagctattc aggcctggta tgagtcagca acaccttctt cacgaggcag acctcagcgc
     1321 tattctgacc ttgccatcac gactgtgctg gtcattaaac gcgtattcag gctgaccctg
     1381 cgcgctgcgc agggctttat tgattccatt ttttctctga tgaacgttcc gctacgctgc
     1441 ccggattaca gctgtgtcag caggcgggca aagtcggtta atatcagttt caaaacgccc
     1501 acccggggtg aaatcgcaca cctggtaatt gattccaccg ggctgaaggt cttcggtgaa
     1561 ggcgagtgga aagtca
//
LOCUS       DAPGWB010000336         1552 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.342, whole genome shotgun sequence.
ACCESSION   DAPGWB010000336 DAPGWB010000000
VERSION     DAPGWB010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.342"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     repeat_region   57..1427
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=57..85
                     /rpt_unit_seq="gtgttccccgcgccagcggggataaaccg"
BASE COUNT          356 a          430 c          430 g          336 t
ORIGIN      
        1 ttggtagatt gtgactggct taaaaaatca ttaattaata ataggttatg tttagagtgt
       61 tccccgcgcc agcggggata aaccggcatt acggtaaatc gctggggctg tcccgtagtg
      121 ttccccgcgc cagcggggat aaaccgctgg ggctgcacat tgacaataaa ccgccgccgt
      181 gttccccgcg ccagcgggga taaaccgact tgattaccgc tattttctga cgatttaatg
      241 tgttccccgc gccagcgggg ataaaccgcc tgataattta cgctattcag cggagatgat
      301 gtgttccccg cgccagcggg gataaaccgt ggctatagta tcatatgatt tctatttgtc
      361 agtgttcccc gcgccagcgg ggataaaccg cggcttgttt aattgcgtgg aacgtctcaa
      421 ttgtgttccc cgcgccagcg gggataaacc gacggcgtgg attgagggac gggtatttgg
      481 tccgtgttcc ccgcgccagc ggggataaac ctagatcgcg ccacgaggaa acgaatatga
      541 acgggtgttc cccgcgccag cggggataaa ccgccgccga tttccctggc gtcaaaagcg
      601 gtgaggtgtt ccccgcgcca gcggggataa accgctcttt ctcagtcatc tggcgctcaa
      661 cgccgggtgt tccccgcgcc agcggggata aaccggcagc aattgccgga gttttactaa
      721 ttgcctcgtg ttccccgcgc cagcggggat aaaccgtttt gatttcatta acggcgctcc
      781 ccatatttgt gttccccgcg ccagcgggga taaaccgata caaacgcggt gtttatcaat
      841 atgaattttg tgttccccgc gccagcgggg ataaaccggc aaattaagct ggctggcaat
      901 ctctttcggg gtgttccccg cgccagcggg gataaaccgg cgtcgctgga agaacaaaac
      961 cgcctgatcg agtgttcccc gcgccagcgg ggataaaccg gcaccacgcg taccccgatg
     1021 tttgttttgc cagtgttccc cgcgccagcg gggataaacc ggctccctgt cagttgtaat
     1081 cgataacgtt gatgtgttcc ccgcgccagc ggggataaac cgatgtaggg gcaatcgaac
     1141 gattctctgc cgacgtgttc cccgcgccag cggggataaa ccgatgtagg ggcaatcgaa
     1201 cgattctctg ccgacgtgtt ccccgcgcca gcggggataa accgtcgaag aagaaaggga
     1261 aataatgcga ggaacggtgt tccccgcgcc agcggggata aaccgtatta cgcgccagca
     1321 atgctgacag cggcaaagtg ttccccgcgc cagcggggat aaaccgcgcg agagccagca
     1381 aaacgccagg gcacaaaaga gttccccgcg ccagcgggga taaaccacca tataacccgt
     1441 tatctctttc tcaagttttt atattagcag tacttgtaat aagcaacata tccacgtaac
     1501 ccctcatgtt caaaatagtt ctccatgcca gagaagttca caattatcga ta
//
LOCUS       DAPGWB010000337         1537 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.343, whole genome shotgun sequence.
ACCESSION   DAPGWB010000337 DAPGWB010000000
VERSION     DAPGWB010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.343"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..1535
                     /gene="rhsC"
                     /locus_tag="RHX79_004749"
     CDS             <1..1535
                     /gene="rhsC"
                     /locus_tag="RHX79_004749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhs element protein RhsC"
                     /protein_id="HDV2199810.1"
                     /translation="VHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIAR
                     DAHYLYRYDRYGRLTEKTDLIPEGGIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE
                     SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRSRIQTI
                     YQPGSFTPLIRVETATGELARTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESE
                     ILAARVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALISTEGT
                     TAWYAEYDEWGNQLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLRGRYITQD
                     PIGLKGGWNFYQYPLNPISNIDPLGLETLKCIKPLHSMGGTGERSGPDIWGNPFYHQY
                     LCVPDGKGDYTCGGQDQRGESKGDGLWGPGKASNDTKEAAGRCDLVETDNSCVENCLK
                     GKFKEVRPRYSVLPDIFTPINLGLFKNCQDWSNDSLETCKMKCSGNNIGRFIRFVFTG
                     VM"
BASE COUNT          397 a          388 c          447 g          305 t
ORIGIN      
        1 gcgttcacac caccgcagcg aaccttgata tccgcatccc gtatgccaca gacccggcag
       61 gtaaccgcct gcccgacccg gagctgcacc cggacagcac cctcagcatg tggccggata
      121 accgtatcgc ccgtgacgcg cactatcttt accggtatga ccgttacggc aggctgacgg
      181 agaaaaccga cctcatcccg gaagggggta tccgtacgga tgatgagcgc acccaccggt
      241 accattacga cagtcagcac cggctggtgc actacacgcg gacacaatat gcagagccgc
      301 tggtcgaaag tcgctatctt tacgacccgc tgggccgcag ggtggcaaaa cgggtatggc
      361 gacgtgaacg ggacctgacg ggctggatgt cgctgtcacg gaaaccgcaa gtgacctggt
      421 acggctggga cggcgaccgg ctgaccacga tacagaacga caggagccgc atccagacga
      481 tttatcagcc ggggagcttc acaccactca tcagagttga aactgccacc ggtgaactgg
      541 ccagaacgca gcgccgcagc ctggcggatg cgcttcagca gtccggcggc gaagacggtg
      601 gcagtgtggt gttcccgccg gtgctggtgc agatgctcga ccggctggaa agtgaaatcc
      661 tggctgcccg ggtgagtgag gaaagccgcc gctggctggc atcgtgcggc ctgaccgtgg
      721 agcagatgca aaaccagatg gacccggtat acacgccggc gcgaaaaatt cacctgtacc
      781 actgcgacca tcgcggcctg ccgctggccc ttatcagcac ggaagggaca acagcgtggt
      841 acgcagaata cgatgaatgg ggtaaccagc tgaatgaaga gaacccgcac cagctgcagc
      901 agctcatccg cctgccgggg cagcagtatg atgaggagtc cggcctgtat tataaccgcc
      961 accgctatta tgacccgctg cgggggaggt atatcactca ggatccgatt gggctgaagg
     1021 ggggatggaa tttttatcag tatccgttga atccgatctc aaatatagat ccattaggat
     1081 tagaaacact aaaatgcatt aagccactgc attcaatggg cggaactggt gaaagaagcg
     1141 gtccagatat atgggggaat ccgttctatc atcaatatct ttgtgtccca gatggtaaag
     1201 gggactatac ttgtggtggc caagaccaac ggggagaatc aaaaggagat ggtctatggg
     1261 ggccaggtaa agcaagtaat gatacaaaag aagctgctgg ccgttgtgac ctcgttgaaa
     1321 ccgataatag ttgtgtggag aactgtttaa aagggaagtt taaagaggta aggccgcgtt
     1381 attctgtatt gcctgatata ttcacaccta taaatttagg gctatttaaa aactgccaag
     1441 actggtctaa tgattcttta gaaacatgta agatgaagtg ctccggaaat aacattggac
     1501 gttttattag atttgtattc accggagtga tgtaatg
//
LOCUS       DAPGWB010000338         1521 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.344, whole genome shotgun sequence.
ACCESSION   DAPGWB010000338 DAPGWB010000000
VERSION     DAPGWB010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.344"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(43..115)
                     /locus_tag="RHX79_004750"
     tRNA            complement(43..115)
                     /locus_tag="RHX79_004750"
                     /product="tRNA-OTHER"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
BASE COUNT          410 a          375 c          333 g          403 t
ORIGIN      
        1 atttgtgtca gtgcccaaaa acacgtccaa ctgcttttct ttagcgggtg gtgggagtcg
       61 aacccacatc atcagtcgaa aaaaactgag gtaattacca ttatacgata cccgcacaac
      121 atattaaaaa tgaacatatt atttatatgt caatcagcat tatccttgcc ttcccggtaa
      181 tccactctca aggtttgtaa aacataaaaa aagctggttt cacacatcca ttttatgaac
      241 gtgctcatga ttttctcttt ggagcacgtg cttgcgcaac cagcattaaa ataaaatgca
      301 agcgtcagta tagccaagtt ggcatcgggg atgaatgcca tgaactttcg taaagaagat
      361 taaatcaatg tacatttgta ttgtttgcta attgtgcaca ggtctgccac cagatgacca
      421 gcccccagga ttagatgcag ctatctgtta gtaatgtcgc cattccacca ccgtgctgca
      481 aactctgatg gcatctgata attcagtact gaatgtggat gatactcgtt agccagccat
      541 aatgactttc cttagcaaac gacatccctg aacctgtgct cattcagaca ttcatcgcga
      601 aatagcccgt taaagcgctc aggaaatatg ttctacgtta gtttgtccga ctggattctg
      661 ttcaggtctt atcgtcaccg gatagccttg aaacagtgca atgcagtcca gaatacgcgt
      721 gacctgaaca cctgaaatcc cgaatactgt ggttattgtt aaacactcct tcgtaaatgt
      781 cgtccacgca ggtcaggcat ttgattctgc gaccagtaac cagcgtgtcc atggcaaaat
      841 ccatcgactt ggtcaggttt tgaacctccg gacagagtta cggcaagcgt tcttgaccag
      901 ccctttacga cgtcatctgc atttcacgcc ctggcagctc agatgataaa gatggtaaac
      961 gtgcttgcga ttagcatgag ccccttcacg gtgcagtact accagatgtg gcggttgcca
     1021 aaacgtctgc gctttagtga cagcatcaat gatgtgccct gctcaatacg tatcagaata
     1081 cgtattgagc aggactctga gtctcatcgc gcagatcgac agggacaagt cagcctgcag
     1141 caagacgttg cgtcagagca gtcgtatcac atataaaacg gtgcctcgct tcgggtctgc
     1201 catcagtact ttagccctgg agtcacctga agcgcgtcct tatcgggata gcttgggtaa
     1261 gcaacacctg gagtctgcgc cctcttcctc aagcgacttc aggggcttga cctcgggtat
     1321 ctccatacca ctatacttct tacaccaggt ataaaagagt gcatcggaca tggatgcgct
     1381 tgctacagag ctcacgctcc tccggctata ctgatactct gtttgccgga aaaatgcttt
     1441 ttcatgggga tgtcctcatg tggactatga agacattgct gacaccaaga tgcatcaatc
     1501 aacgaagagg ggaaatcctg t
//
LOCUS       DAPGWB010000339         1513 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.345, whole genome shotgun sequence.
ACCESSION   DAPGWB010000339 DAPGWB010000000
VERSION     DAPGWB010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.345"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..931)
                     /locus_tag="RHX79_004751"
     CDS             complement(<1..931)
                     /locus_tag="RHX79_004751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDV2199811.1"
                     /translation="MDLLAESITEVAVSGEIANTDRVLNIAYGIDRNFLFGAAVSMQS
                     VVMHNPDLAVKFHLFTDYIDEDYLQRVNAFTSKNANVEVIIYKVSNAFIDIFPSLKQW
                     SYATFFRLVAFQYLSETIENLLYIDADVICKGSLAGLLDINFDEDKFAAVIKDVPFMQ
                     EKPAKRLAIEGLPGNYFNAGVVYLQLEAWAKNDFMNKAIAMLASDPQHTKYKCLDQDI
                     LNILFFGHCIFISGDYDCFYGIDYELKNKSDEDYKKTITDDTKLIHYVGVTKPWNDWT
                     NYPCQKYFNEAYQASCWNDVAFIPATNEKQYQVK"
     gene            complement(957..>1513)
                     /gene="rfaY"
                     /locus_tag="RHX79_004752"
     CDS             complement(957..>1513)
                     /gene="rfaY"
                     /locus_tag="RHX79_004752"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /protein_id="HDV2199812.1"
                     /translation="VSLIDTKYGRYVFKVFAPKTKRNERFLKSFVKGDYYQNLIVETD
                     RVRSAGLTFPNDFYFLAERKIFNYASVFIMLIEYVEGVELNDMPIIPENVKAEIKASM
                     EKLHALNMLSGDPHRGNFIVSKDGVRIIDLSGKSCTAERKARDRLAMERHLGIANEIK
                     DYGYYSVIYRTKLRKFIKKLKGKA"
BASE COUNT          471 a          319 c          261 g          462 t
ORIGIN      
        1 atttcacttg atactgcttt tcattcgtgg ctggaataaa cgccacatca ttccagcaag
       61 aagcctgata agcctcatta aaatacttct ggcagggata attcgtccag tcgttccagg
      121 gcttcgttac gccaacataa tgaatcagct tagtatcatc ggtaatggtc tttttataat
      181 cttcatcgct tttatttttt aactcatagt caatgccata aaagcaatca taatcgccgc
      241 taataaaaat acaatgacca aagaacagaa tatttaaaat atcctgatca aggcatttat
      301 acttcgtgtg ctgcgggtca cttgccagca tagcaatggc tttattcata aaatcatttt
      361 tcgcccatgc ttcaagctgc agatatacta caccggcgtt gaaataattc cctggaagtc
      421 cctctatagc cagacgcttc gctggttttt cctgcataaa aggcacatct ttaataacag
      481 ctgcgaactt atcctcatca aaattaatat caagcaatcc agctaatgag cctttacaga
      541 tgacatcagc atcgatatat aacagatttt caatagtttc actcaaatac tggaacgcaa
      601 ctaaacggaa gaatgttgca taagaccact gtttcaggct ggggaagata tcaataaagg
      661 cattggagac tttataaatt attacttcaa cgttagcatt tttgctggta aaagcattaa
      721 cacgttgtag ataatcttca tcaatgtagt cggtaaagag atgaaactta accgcaaggt
      781 ccgggttatg cataacaact gattgcatag atactgccgc accaaataaa aagttacggt
      841 caataccgta agcgatattt aacacacgat cggtgttagc aatttcccca gagacagcga
      901 cttcagtaat actctcagct aataaatcca tgttggttcc gttttgactg tgtggtttac
      961 gctttgcctt ttaatttttt aataaatttg cgtagtttgg ttctgtagat tactgaatag
     1021 tagccataat cttttatttc gttggcaata cccaggtgac gttccatggc caggcgatca
     1081 cgagctttac gctctgccgt acagctttta ccggataggt caattatcct gacaccatct
     1141 ttactaacga taaagttacc ccggtgtggg tcgcccgata gcatatttaa ggcatgcaat
     1201 ttttccattg aagccttaat ttctgcttta acattttctg gaataatcgg catatcattg
     1261 agctctacgc cctcgacata ctcgataagc atgataaaaa cactggcata gttgaaaatt
     1321 ttacgctcag ccagaaaata aaaatcatta ggaaaagtaa gacctgcact tctgacacga
     1381 tcggtttcaa cgatcaaatt ctgatagtag tcacctttta caaaagattt taaaaaacgt
     1441 tcattccttt tcgttttcgg agcaaagact ttaaaaacat agcgaccata tttcgtatca
     1501 atcaacgata ctt
//
LOCUS       DAPGWB010000340         1485 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.346, whole genome shotgun sequence.
ACCESSION   DAPGWB010000340 DAPGWB010000000
VERSION     DAPGWB010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1485
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.346"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            136..1365
                     /locus_tag="RHX79_004753"
     CDS             136..1365
                     /locus_tag="RHX79_004753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HDV2199813.1"
                     /translation="MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITA
                     LVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVL
                     IYAVAITNSLTEQLAKHMVIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPL
                     IAYFLFLSIYLVGSWQPDLLTTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDR
                     REKYGEHAMDKCKKIMKVAYLIICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALS
                     MLPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRA
                     LSIMLVSLITFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPWRSIGN
                     LITLIVGILCVSVMFFS"
BASE COUNT          359 a          332 c          313 g          481 t
ORIGIN      
        1 ataactggca cgtaaggttt gcaaccacta acccaccaat agaggggtag atagggcgtt
       61 aatctcccat acttaacctg gtttatggta aattgccctc cattttgttt aatttgtaga
      121 tgatacgttc agataatgtc taatatttgg tctaaagaag aaactctgtg gagtttcgcg
      181 ctctacggca cagccgttgg tgcaggcacg ctcttccttc ctattcagtt aggttcggca
      241 ggggctgtgg tcctgtttat tactgctctg gtcgcctggc ctttaacata ttggccacat
      301 aaagccttat gccagttcat cctctcatcg aaaacatcag caggtgaagg gataacgggc
      361 gcagtaacac actactatgg caagaagatt ggtaatctga ttaccacgct gtacttcatc
      421 gccttttttg tcgtcgtgtt gatatatgca gtggcaatta ccaactcact tacggaacag
      481 ctggcaaagc atatggttat tgatcttcgc atccgtatgt tggtgagtct gggtgttgta
      541 ttaatcctga atctcatttt tctgatggga cgccatgcaa ccattcgggt aatgggtttt
      601 ttggtattcc cattgattgc ctatttctta tttctttcca tttaccttgt cggtagttgg
      661 caacctgatc tattaacgac tcaggtagag ttcaatcaga atacccttca ccagatatgg
      721 atatcgattc ccgtgatggt tttcgccttt agccatacgc ccattatttc tacgtttgcc
      781 atagacagac gtgaaaaata tggcgaacac gctatggata aatgcaaaaa aattatgaaa
      841 gtcgcttatc tcatcatctg cataagtgta ctgttctttg tctttagctg cctgctttct
      901 attccacctt cgtatattga agcggctaaa gaagaagggg tcaccatttt atcggcgctt
      961 tctatgctgc cgaacgcccc agcatggctg tcaatttccg ggattattgt cgcagtagtt
     1021 gcgatgtcga aatcattcct gggtacgtac tttggcgtta ttgaaggtgc cacggaggtc
     1081 gtcaaaacaa cactacagca ggttggtgta aagaaaagtc gtgcatttaa ccgcgcacta
     1141 tcaattatgt tggtatcgct gatcaccttc attgtttgtt gcattaaccc gaacgcgatt
     1201 tcgatgattt acgcgatcag cggcccgctc attgccatga tacttttcat catgcctacg
     1261 ttgtcaacgt atctgatccc ggcgcttaaa ccctggcgtt ccatcggaaa tctgattacg
     1321 ctgatcgtgg gtatcctgtg cgtatcggta atgttcttta gctgatatcc attgtgaatg
     1381 gttcaaaatt gctacaattt tgaaccattc cagttttcat aatgttcatt cgttattatt
     1441 ccgcactatc acttccctca tcatatccta gtattatcag ttagt
//
LOCUS       DAPGWB010000341         1477 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.347, whole genome shotgun sequence.
ACCESSION   DAPGWB010000341 DAPGWB010000000
VERSION     DAPGWB010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.347"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            350..1138
                     /gene="phoH"
                     /locus_tag="RHX79_004754"
     CDS             350..1138
                     /gene="phoH"
                     /locus_tag="RHX79_004754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PhoH"
                     /protein_id="HDV2199814.1"
                     /translation="MGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMGGVEA
                     IGMARDSRDTSPILARNEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHK
                     DVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIG
                     KVEIAPFAYMRGRTFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLP
                     RGVCSGLSDALERFEEDEMVGIVRFGKEDCVRSALCQRTLHAYS"
BASE COUNT          360 a          348 c          390 g          379 t
ORIGIN      
        1 cgagatctgt tgtacttatt aagtagcagc ggaagttccc ggcagtgata gtcagtcact
       61 atggagatcg cggatggtaa cgtcctgtac tggacatgtt ttagataatc aacgcgccac
      121 cactcgcgga gttttctcct ccggtagtca tctcgtcact ttgcattttc aacctcatcc
      181 tttcttttca tgtgttaccg acgccgtaaa cggtgcgcgt agccgttttt cggcatttta
      241 tccaaaagca aactatggct tacaaggaag ccaaccctct gatgttcgtg cgcataatcg
      301 cgctgccaac ggcgcgtgtg atgaatacaa acaactcaag gtgctctcca tgggaagaca
      361 aaaagcagtg atcaaagctc gtcgcgaggc aaaacgtgtg ctgagacggg attcgcgcag
      421 ccataagcag cgtgaagaag aatcggtcac ctcgcttgtg cagatgggcg gcgtagaagc
      481 cattggtatg gcccgcgaca gtcgcgatac ttcgcccatc ctcgcgcgaa atgaagcgca
      541 attgcactat ctgaaggcta ttgagagtaa gcagctgata ttcgccacgg gcgaagccgg
      601 gtgcggaaaa acctggatca gcgcagcaaa agcggcagaa gccctgatac ataaggatgt
      661 cgacaggatt atcgtcaccc gtccagttct gcaagccgat gaagatcttg gcttcttacc
      721 tggagatatc gcagaaaagt ttgctcccta ttttcgcccg gtctacgacg tgctggtccg
      781 gcgcttaggg gcttccttta tgcagtactg cctgcgaccg gaaataggga aggtggaaat
      841 tgcgccgttc gcctatatgc gtggacgtac ctttgaaaat gcagtcgtca ttcttgacga
      901 ggcgcagaat gtgactgccg cgcaaatgaa aatgttttta acccgcctcg gggagaacgt
      961 gacggttatc gtcaacggtg atatcacgca atgcgatttg cctcgcggcg tgtgctccgg
     1021 attaagtgac gcgctggaac gtttcgaaga agatgaaatg gttgggatcg tccggttcgg
     1081 aaaagaggat tgcgtacgtt cggcactttg ccaacgtacg ctgcatgcat acagttaagt
     1141 gtattatcgg tgcagagccc gggcgaaccg ggctttgttt tatttcaaca gattttcact
     1201 tcaggttagc gttcaggggg gcgactttga gcgtgttgat aagctgaact ggagtctggt
     1261 ttagatactc ttaccaggca tttttcgtca tagcatcaga ccagtgtaat actgccagcg
     1321 cggagagttt ttcttccaga agccaaaaaa atgagcatct gcctatcttt tttcggccat
     1381 tcaacctgta caggagatct ggtgccaatt ttgcttatga ggtttaatca acaatgggct
     1441 atactttgac tgactgttta acaccgaata tattcct
//
LOCUS       DAPGWB010000342         1476 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.348, whole genome shotgun sequence.
ACCESSION   DAPGWB010000342 DAPGWB010000000
VERSION     DAPGWB010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.348"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(13..747)
                     /locus_tag="RHX79_004755"
     CDS             complement(13..747)
                     /locus_tag="RHX79_004755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscJ/YscJ/HrcJ family type III secretion inner
                     membrane ring protein"
                     /protein_id="HDV2199815.1"
                     /translation="MKYISLLLFILLLCGCKQQELLNHLDQQQANDVLAVLQRHNINA
                     EKKDQGKTGFSIFVEPTDFASAVDWLKIYNLPGKPDIQISQMFPADALVSSPRAEKAR
                     LYSAIEQRLEQSLKIMDGIISSRVHVSYDVDNGDSGKTALPIHISVLAVYEKDINPEI
                     KINDIKRFIVNSSASVQYENISVVLSKRRDIIEQAPTYEISEPVFAYDKAMPVSILLA
                     LISVATCWLLWKYRAILTNLVRLKIK"
     gene            complement(788..1003)
                     /gene="sctI"
                     /locus_tag="RHX79_004756"
     CDS             complement(788..1003)
                     /gene="sctI"
                     /locus_tag="RHX79_004756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000566300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system inner rod subunit
                     SctI"
                     /protein_id="HDV2199816.1"
                     /translation="MIDLNDRVLNLDNPDDKMISAFANYAVQTENWQQNALQALRSDK
                     EGLTPEKLLVLQDHVLNYNVEVSLVEH"
     gene            complement(1095..1335)
                     /locus_tag="RHX79_004757"
                     /pseudo
     CDS             complement(1095..1335)
                     /locus_tag="RHX79_004757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311745.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle complex
                     protein"
     gene            complement(1349..>1476)
                     /locus_tag="RHX79_004758"
     CDS             complement(1349..>1476)
                     /locus_tag="RHX79_004758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001365813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PrgH/EprH family type III secretion apparatus
                     protein"
                     /protein_id="HDV2199817.1"
                     /translation="WGKQYVRFNVNLKNQDTNNSSFSYGDNRFEKSQGSNWTFQE"
BASE COUNT          436 a          303 c          244 g          493 t
ORIGIN      
        1 gctctcatat gtctacttaa ttttcaacct gactaaatta gttagaatgg ccctatactt
       61 ccataacagc cagcaagtcg ctacggatat taatgcaagt aagatagaaa ccggcatagc
      121 cttatcataa gcaaaaacag gttcgctaat ttcatatgtt ggtgcttgct caataatgtc
      181 tcttcgtttt gacaatacaa cagaaatatt ttcatattgt acgcttgcag agctattaac
      241 aataaatctc ttgatatcat ttatttttat ttctgggttg atatcttttt catatactgc
      301 aagtacagaa atatgaattg gtaaagcagt tttaccacta tcgccattat caacatcgta
      361 actaacatgt actctcgaag aaataatgcc atccataatt ttgagagatt gctctaaccg
      421 ctgctcaata gcagaatata gccttgcttt ttccgctcgt ggagatgaaa cgagtgcatc
      481 tgcagggaac atctgcgata tttgaatatc aggcttaccc ggtagattgt agatttttag
      541 ccaatccacc gcagaagcaa aatccgttgg ttcgacaaat attgaaaatc ctgttttgcc
      601 ttgatccttc ttttcagcat taatattatg tctttgtaaa acagcaagga catcattagc
      661 ttgctgttga tcaagatggt tcaataattc ctgctgcttg cagccgcaca acagcaggat
      721 aaacaataat aatgatatat atttcatgag cgggtcaacg tctcaactgc agcgacaatc
      781 tttcttgcta atgttccacc aatgaaacct cgacattata attaagcaca tgatcctgca
      841 agactaataa tttttcagga gttaacccct ctttatcaga ccttaatgct tgtaacgcat
      901 tttgctgcca attttcagtt tgtacagcat agttggcaaa agcggagatc attttatcat
      961 ccgggttgtc aagattgaga acccgatcat ttaaatcaat cactttcgct tgctgtattt
     1021 catgagcagt tgattactca gctctatcaa taggtggcat attgcttact gacataataa
     1081 aatccttatc cagtttagcg gaagttttgt atgattgctg aatcaagatc tttatacgct
     1141 tttacaacgt tagattgcgc atttcgatat aatgtatact cagctaatgc actttgatat
     1201 tcggcaagaa atttcgtgtc ggagggattg gttggctaaa tcctccaacg ctttttcaac
     1261 ttgctggttc agatcatcaa cgccctgatc aaattgattg ctgatatcca taatataacc
     1321 attccaatct gccataagtc ctcctcaatt attcctgaaa tgtccagttg ctaccttgag
     1381 acttctcgaa tcggttatct ccgtagctaa atgaactatt atttgtgtcc tgatttttca
     1441 aattcacatt aaatcttaca tattgtttac cccatt
//
LOCUS       DAPGWB010000343         1447 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.349, whole genome shotgun sequence.
ACCESSION   DAPGWB010000343 DAPGWB010000000
VERSION     DAPGWB010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1447
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.349"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            280..1311
                     /locus_tag="RHX79_004759"
                     /pseudo
     CDS             280..1311
                     /locus_tag="RHX79_004759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          411 a          343 c          353 g          340 t
ORIGIN      
        1 tatttacgca cgcatttgat atacccaaac gacagctagt accccatcaa tctgcatata
       61 aaattgctgg ccacgctaca tcctgttagc gaaagtactg attagtactt caatggccag
      121 tgcaaaactg aaaatccaat tcaggcaaat aagggatgat gataccgtaa gtaaatcgtg
      181 atatcgcgtt aaatatattg ccacatccac acacgttgag tttgcttatt gtgcactgat
      241 ttctatgatg taccctgatc ttagtcagag gtgactcaca tgacaaaaac agtatcaacc
      301 agtaaaaaaa ccgtaaacag cattcgcctg aatttcgcag tgaagcacta aagcttgcgg
      361 aacgcatcgg tgttgctgcc gcaggccgtg gactcagctt gtatgaatca cagctctaca
      421 actggcgcag taaacagaaa aatcagcaga cttcctctga acgtgagctg ccggaacagg
      481 atgaagagct ggccatactc caaaaggtag cgacatactt cgcgaaacgc cagaaatgaa
      541 gtatgtcttt attgaaaaac atcaggctga gttcagcata caggcaatgt gccgcgtgcc
      601 cgcagcggcg ggtatatgtg gtatcggcgg cgggcaagga taaaagcaca cgtcagcagt
      661 tccgtcagta ctgcaacagc gttgtccacg ctgtttttac cctgtcaaaa ccgcgttacg
      721 gtgcactaag cctgcgccgt tagggactga gggcaaaagc ttcccggaag ttcagcctgg
      781 tcagtcaccg cgcacacagc ctgcctgtgt cagaaaatct gcttgagcag gatttttacg
      841 ctgttggccc gaaccagaag tggtcgggag acatcacgta cttacgtacg tgatgaaggc
      901 tggcagtatc tggcagtggt cattgacctg gggtcacgtg ccgctattgg ctggtcaatg
      961 tcaccacgca tgacagcgca aatagcctgc gatgccctgc agatggagct gtagcggcgt
     1021 aagagaccac agaacgatat cattcggagg ccagtactgc tctgcagatt atcaggcatt
     1081 gctgaagcgg cataatctgc gtggcagtat gatcgcaaaa gactgctgtt tcgatcatgc
     1141 ctgcgaggaa atcttctttc attcactgaa agtggaatgt atccacggag aactctttat
     1201 tagctgggaa acaatatggg caacagtgtt tagtgtttac aatcgctggc gacggcacag
     1261 tggatgtggc gccttagtcc tgaacaattt gaaaaccaga acctcgctta gggcggtcca
     1321 tattacgtgg gtaagatcac cccacctgac catgagtggg aggaaggaaa cagaactcat
     1381 ttaacgcact tgcaccacct tcatatcaaa aaatacactt ttccaacgaa acttagtgtt
     1441 aagttta
//
LOCUS       DAPGWB010000344         1423 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.350, whole genome shotgun sequence.
ACCESSION   DAPGWB010000344 DAPGWB010000000
VERSION     DAPGWB010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.350"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..834
                     /locus_tag="RHX79_004760"
                     /pseudo
     CDS             1..834
                     /locus_tag="RHX79_004760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611553.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            928..1290
                     /gene="queD"
                     /locus_tag="RHX79_004761"
     CDS             928..1290
                     /gene="queD"
                     /locus_tag="RHX79_004761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708563.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDV2199818.1"
                     /translation="MKTTLYKDFTFEAAHRLPNVPDGHKCGRLHGHSFVVRLEITGEV
                     DKHTGWIIDFAELKAIFKPTLDRLDHYYLNDIPGLENPTSEVLAEWIWKQIKSQLPHL
                     TAVMVKETCTAGCIYRGE"
BASE COUNT          391 a          322 c          368 g          342 t
ORIGIN      
        1 cacactctgc catgtgttcg gggttcatcg cagcagctac agatactgga aaaaccgtcc
       61 tgaaaaacca gacggcagac gggctgtatt acgcagtcag gtacttgagc tacatggcat
      121 cagccacggt tcggccggag caagaagcat tgccacaatg gcaacccgga gaggctacca
      181 gatgggacgc tggcttgctg gcaggctcat gaaagagctg gggctggtca gctgtcagca
      241 gccgactcac cggtataaac gtggtggtca tgaacatgtt gctatcccta actaccttga
      301 acggcagttc gccgtgaccg agccaaatca ggtgtggtgc ggtgatgtga cctatatctg
      361 gacgggtaag cgctgggcgt acctcgccgt tgttctcgac ctgttcgcaa gaaaaccagt
      421 gggctgggcc atgtcgttct cgccggacag caggctcacc atgaaagcgc tggaaatggc
      481 atgggaaacc cgtggtaaac ccggcggggt gatgttccac agcgatcagg gtagtcatta
      541 tacgagcagg cagttcaggc aggtgatgtg gcgttatcgg atcaaggaga gtatgagtcg
      601 tcggggaaac tgctgggata ttagcctaat ggtacgtttc ttcagaagtc tgaagaacga
      661 gtgggcacca gtgactggtt actttagcct taacgaaggt gtccatacaa taacagagta
      721 tataattgaa tattaagtgc actccggcct catgaatata acggtggatt acctccgaac
      781 gaatcggaaa atagatactg gaaaaaatct gaaattgtga ccagtttttg ttgaccacta
      841 cacaatacag tagtgttaat cactaagtca taaattctag gaagtcttgc ttcttgttgt
      901 tactatataa caaaaaacga ggtcgctatg aaaacaacat tgtacaaaga tttcaccttt
      961 gaagccgcac accgactccc aaacgtgcct gatgggcata aatgtgggcg tttgcacgga
     1021 cactcttttg tggtacgtct ggaaattacc ggagaggtcg ataaacacac cggttggata
     1081 atcgattttg ccgagttgaa ggcgattttc aaacccacgc tagaccgact ggatcactac
     1141 tacctcaacg atattcctgg tctggaaaac ccgaccagcg aagtactggc agaatggatt
     1201 tggaagcaga ttaaatcaca gttgccacac ctgaccgctg taatggtgaa agaaacctgc
     1261 acagcgggtt gcatttatcg cggtgaatga tatccgaccc gatgactggt ttggataaaa
     1321 ccagtcacat tccttagtcg atggcaacaa acaaccttcc attttataac ttgcatcaca
     1381 attctcggca gtttatgttt tccttagtgg cgttgatatg aat
//
LOCUS       DAPGWB010000345         1422 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.351, whole genome shotgun sequence.
ACCESSION   DAPGWB010000345 DAPGWB010000000
VERSION     DAPGWB010000345.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.351"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            101..541
                     /locus_tag="RHX79_004762"
                     /pseudo
     CDS             101..541
                     /locus_tag="RHX79_004762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001102088.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
     gene            663..1085
                     /locus_tag="RHX79_004763"
     CDS             663..1085
                     /locus_tag="RHX79_004763"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199819.1"
                     /translation="MSEAVEPAVRDKKTLCEIYFIICSTLPLILALPRTVAPWQEVTV
                     VGQQQESCVKHDFPVVILQHNCLRVINQPYFHTDTEVAEGANQRFLGVPSILFWCGED
                     MEAAGEPQRINRKVNFAPEPGNLHLHLNFASVMLELVS"
BASE COUNT          369 a          364 c          307 g          382 t
ORIGIN      
        1 agcggtagtt cgtcaatact gttagaaggc tactccagca gcggcagagc actcaggata
       61 ctttttcgcc acctgcattg atgatgtgtt taaatccagg atggcgcaaa acagcgtgct
      121 gttgctggtg caattgggtt gcatatccat ttccccgaac aacagggatg tttcggccag
      181 ccagctataa atggcggtta tgttcatgat gccatcccta gcataaaaaa tatcatattt
      241 tcgctggaag agaatgactg acctgttata tctccggcag ggtcatgctc ctgcacgata
      301 aaaaataatg ctcgttatca tctgtgatga gcctgaattt gcagcccgag ataaaaaagt
      361 agccgaacgc ctgcacgatt tgacgccctt tatcgtagta aatcatcttg gcattactga
      421 tttaggggca agactttgtc gtgcagtata ccatccctcc tccagccttt cccgtaagca
      481 gggtgtaacc aaagaaccgc ttttgctact taaaaatgtg cgaggacttg aactgcttcc
      541 gtaacacgct cactgcagat gttcctgctc cagctcaaag cgctgttccg acgtttattt
      601 gaactggtga agctcccgtt gtcagccaca tcggctatgc attgttccag ttgttgattg
      661 acatgagtga agctgtcgag cctgcagtac gggacaaaaa aactctctgt gagatatatt
      721 tcatcatctg ctcgacctta cctctgattc tggccctgcc gcgaacggta gccccgtggc
      781 aggaagtcac agtagtcggc cagcaacagg aatcctgtgt taaacacgac tttcccgttg
      841 ttattcttca acacaactgc cttcgggtta tcaaccagcc ctattttcac actgacaccg
      901 aagtagcgga aggtgcgaac cagagattct taggtgtgcc cagcatcctg ttttggtgcg
      961 gcgaagacat ggaagcggcg ggagaacctc agcgtataaa ccgcaaagtt aactttgcac
     1021 cagagcccgg taacctccac ctccacctca acttcgcctc agtcatgctg gagctggtat
     1081 cctagctttc tcctttcagt tcgaacatat atcctcaatg gatcaaccgg tctgcgccgc
     1141 cattgtctca tccacgatga tgctgcccca catgctgaac tgaatgatta ctagttactc
     1201 agaacattac tgaaaaattg aggtaacaat gtaacaacct gctcctccat caacttttta
     1261 tgttgtacct gaatttttcg cgccaactca ccttttggcc cattcgtttg tctttattgg
     1321 atggggagcc aaatatataa aatgcagacc ttttctaccc tctggcgcta acaaaacagc
     1381 acaagagggt aaaagtcaca atagacaata attttccgaa tc
//
LOCUS       DAPGWB010000346         1387 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.352, whole genome shotgun sequence.
ACCESSION   DAPGWB010000346 DAPGWB010000000
VERSION     DAPGWB010000346.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.352"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            79..1290
                     /gene="bluF"
                     /locus_tag="RHX79_004764"
     CDS             79..1290
                     /gene="bluF"
                     /locus_tag="RHX79_004764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="blue light-responsive regulator BluF"
                     /protein_id="HDV2199820.1"
                     /translation="MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNG
                     SHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHER
                     DDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKE
                     LDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTAD
                     LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF
                     TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITN
                     VHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN
                     GIPSIAWPEKK"
BASE COUNT          403 a          293 c          292 g          399 t
ORIGIN      
        1 ttggtattaa aagaaagaca caagaagata tgtctgttac cgtcttactc tcgcctcacc
       61 cattaccctg gattgttaat gcttaccacc cttatttatc gtagccatat acgtgacgac
      121 gaacctgtca aaaaaatcga agaaatggtt tcgatagcaa atcgcaggaa catgcagtct
      181 gacgtaacag ggatcttact gtttaatggt tctcattttt tccagcttct ggaaggtccg
      241 gaagaacagg ttaaaatgat atatcgggct atatgccagg atccacggca ctataatatt
      301 gttgagctgc tgtgcgatta cgcgcctgct cgccgttttg gcaaagcggg aatggaatta
      361 tttgatttgc gcctgcacga gcgagatgac gttttacagg ccgtattcga caaaggcaca
      421 tcaaaatttc agctaactta tgatgacaga gcgctacaat tttttcgtac ttttgtcctt
      481 gcaaccgaac aatcaaccta tttcgagatc cctgccgaag actcctggct ttttatcgct
      541 gacggatctg ataaagaact tgattcctgt gccctttcac caactataaa cgaccacttt
      601 gcctttcatc ctattgtcga tcccttatcg cggcggataa tcgcttttga agccattgtg
      661 caaaaaaatg aagatagccc atcagccata gcggttgggc agcgtaaaga cggggaaatc
      721 tacacagcgg atctcaaaag taaggcgctt gcattcacga tggcacacgc acttgagctc
      781 ggtgataaaa tgatttcaat caatctatta cctatgaccc tggttaacga acctgacgca
      841 gtctcttttt tacttaatga aataaaggcc aatgctctgg tgcctgaaca aatcatcgtt
      901 gaatttactg aaagtgaagt catatctcgg tttgatgagt ttgccgaagc gattaaatcg
      961 ctaaaggctg ctggtatcag tgtagcaatt gatcattttg gcgcaggttt tgctggtttg
     1021 ttactcctgt cacgcttcca gcctgacaga attaaaatca gtcaggaatt gattaccaat
     1081 gttcataaaa gtgggccacg gcaggcaatt attcaggcga tcataaaatg ctgtacatca
     1141 cttgaaattc aagtcagtgc tatgggcgtg gcaacaccag aagagtggat gtggcttgaa
     1201 tccgcaggaa ttgagatgtt tcagggagat ctgtttgcta aagctaaatt gaatggtatc
     1261 ccttccatag cgtggccaga gaaaaaataa ttttcagcac attctttcac atgatttcag
     1321 taaatcatcg tgaaaatgaa tacgttacgt ttaaatttaa tccacattaa aaataatgtt
     1381 tcatcca
//
LOCUS       DAPGWB010000347         1361 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.353, whole genome shotgun sequence.
ACCESSION   DAPGWB010000347 DAPGWB010000000
VERSION     DAPGWB010000347.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.353"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..348)
                     /locus_tag="RHX79_004765"
     CDS             complement(<1..348)
                     /locus_tag="RHX79_004765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 family protein"
                     /protein_id="HDV2199821.1"
                     /translation="MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNI
                     RIITHDDTVLLLRGTRNLLKVSTTKTPAKIKEAALLHICGKSTFREYCSTLAGAGVFR
                     WVTDVNHNKRSYYA"
     gene            complement(569..1300)
                     /gene="bluR"
                     /locus_tag="RHX79_004766"
     CDS             complement(569..1300)
                     /gene="bluR"
                     /locus_tag="RHX79_004766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor BluR"
                     /protein_id="HDV2199822.1"
                     /translation="MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDE
                     EDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRA
                     RIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRK
                     PGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGM
                     APTRRQNELLQHWGEQGYKVIFHAP"
BASE COUNT          349 a          315 c          307 g          390 t
ORIGIN      
        1 ggcgtagtaa ctgcgtttgt tatgattaac atcagtaacc caccggaaaa cgcccgcgcc
       61 tgctagtgtt gaacagtatt cccgaaatgt agattttccg caaatatgaa gcaatgcggc
      121 ctcttttatt ttagcagggg tcttggtcgt actaactttt aacaggttcc tggttcctct
      181 taataacaaa accgtgtcat cgtgagtaat aattctgatg ttatccgtag ccagataata
      241 aatgtaatgt gcaatacggt gatgttttaa ttctgaataa aaccaggaga agttttgctc
      301 ttttctcact tgctcaaaca tcttttgaaa aacaacgacc tgatccatca ggataataac
      361 ctcttgttag ttgtgagact gcgtagtgtg cacgatcggt tttaccactt caatctggtc
      421 tgtcctttgg ctgtgatatg tacagagtgt gatagaggga atatctgaat tctcccggtg
      481 agcattttgc aacggaccag ctccggtaca aacgctgttg tgggttcaga ttataacatt
      541 ctgtctaagg ggcgggataa aggtgaaatt agggggcatg aaagatgact ttataacctt
      601 gctcacccca atgttgtaaa agttcgtttt gccttctcgt tggtgccatg cctgtccaga
      661 caatcaatgt ttgcgtcggg aacagttccg ggcgcggcga ttcaatggga tcagcaagaa
      721 cagaaatgtg ccatcctgac aatgataaac gccatgcttc cagccacaat cgtgctctct
      781 cttcaacatt ccacgccatc agaatggctt ctttaccggg cttacggcgc atttcgaaaa
      841 gcgaggttgc tgcgtattca attaatgcgc cgtcaaacat actgctcata atgcgggagg
      901 tgttgtgatc aagcacgaga cgctggcgaa caggaaggta aacatgatta atcaattgat
      961 ctactgggta ctctcgaccc agtgaaataa ttctcgcgcg tagtttggca ggattagcca
     1021 tgcgaagaat tgacatcatc tcttcttgca ggcggctcca gtcatcttcc gtatcctggc
     1081 tggtggtttc cagtaatgct ttaactttgc ctacagggac gccattactt atccaacgct
     1141 tgatctcttc gatgcgttgt atgtcttctt catcaaagag tcggtgtccg ccttcactgc
     1201 gctgtggttt taacaaaccg tagcggcgtt gccaggcccg gagagtgaca ggattaatcc
     1261 cgcaacgttc agcaacatca ccaatgctgt aataagccac aattcctcct tgcggtcaca
     1321 aatctccgtc gcctgtacac gacccaataa tactttgtac a
//
LOCUS       DAPGWB010000348         1347 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.354, whole genome shotgun sequence.
ACCESSION   DAPGWB010000348 DAPGWB010000000
VERSION     DAPGWB010000348.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.354"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..450)
                     /locus_tag="RHX79_004767"
     CDS             complement(<1..450)
                     /locus_tag="RHX79_004767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000490374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDV2199823.1"
                     /translation="MFSALDIKTLMQGTLYGDPSLRVDTIRPIHSPLVGGLSIVMTPG
                     DLLHIPTTGADIIIGPEEIISSNAKAKIVVDYLNVNNLNKVLRYYKVHKYRLFKQENT
                     STIPDVYIGKHCQIGMNCHFMPGVKIMNCVTIGDNVAIHANTVIKEGT"
     gene            complement(469..>1347)
                     /locus_tag="RHX79_004768"
     CDS             complement(469..>1347)
                     /locus_tag="RHX79_004768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000242972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDV2199824.1"
                     /translation="YETKSTDNYLGKTVKEYTKTHEIFQAYFSQPNWQFAAIYGLKSI
                     DRRQEEKGYHENETSLQNYISLNKTFTIGNGFDFSLVYDLMYTDGNIDSPYVTGLHTV
                     TVDNSFRPTLTYFNSDWNAGFYSNVEYLYSRNDKSSWGVREEEGQSILFQPYKRFGAW
                     EFGIEFFYQKKHNDEFNHGKINDRSIYTETYYEPIIKYAFENAGNLYLRTRFGHGKTE
                     NADSLQYNANRTYFKTIRKATLGYEQNIGDDWIAKIEYKHAWEKEHKNFYDPRDEEKY
                     NVLNQDNIYVHAFYRF"
BASE COUNT          376 a          262 c          241 g          468 t
ORIGIN      
        1 agtaccttct ttaatcactg tattcgcatg aatggcaaca ttatcaccta tggtcacaca
       61 gttcataatt ttaacaccag gcataaaatg gcagttcata cctatctggc agtgtttacc
      121 aatgtataca tcaggtatcg ttgaagtgtt ttcttgctta aacaaacgat acttatgtac
      181 cttatagtat cttaaaactt tgttaaggtt attcacattc agataatcga ctacaatctt
      241 tgccttagca ttagaactaa tgatctcttc cggtccgata attatatccg caccagtcgt
      301 tggtatatgc aacaaatctc caggtgtcat aacaatcgag agtccaccaa ctaaaggact
      361 atggattggc cgaatggtat caaccctgag tgatggatca ccatataaag ttccttgcat
      421 caacgtttta atatctagtg cgctgaacat aggtttccct ctgtttaatc aaaagcgata
      481 gaaagcatga acataaatat tatcctgatt gagcacatta tatttttctt catctcttgg
      541 atcataaaag tttttgtgct ctttttccca ggcatgttta tattcaatct tggctatcca
      601 gtcgtcacct atgttttgtt cataacctag agtggctttt cgaattgttt tgaaataggt
      661 tctgtttgca ttgtattgca aactatctgc gttttctgtt ttcccgtgtc cgaagcgggt
      721 gcgtagatac agattacctg cgttttcaaa agcatatttg ataattggct cgtagtaagt
      781 ttcggtataa atactacgat catttatttt accgtgatta aattcatcgt tatgcttttt
      841 ctggtagaaa aattcaatac caaactccca tgcaccaaaa cgtttatagg gctgaaatag
      901 tatactttga ccttcttctt cgcgtacgcc ccaggagctc ttatcatttc gactgtataa
      961 gtattcaacg tttgaataaa aacctgcgtt ccagtcagag ttaaagtacg tcaacgtagg
     1021 gcgaaaactg ttgtcaacag ttacagtatg caagcctgta acataagggc tatctatatt
     1081 tccgtcggta tacatcaggt cgtataccag actgaagtcg aaaccgttac caatagtgaa
     1141 cgttttgttt agtgatatat agttttgcag acttgtttca ttttcgtgat agcctttttc
     1201 ttcttgtcgg cgatcgatag acttaaggcc atagattgct gcaaattgcc aattaggttg
     1261 gctgaaatag gcctggaaaa tctcgtgtgt tttagtatat tcctttactg ttttacctaa
     1321 atagttatca gtgcttttgg tctcata
//
LOCUS       DAPGWB010000349         1311 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.355, whole genome shotgun sequence.
ACCESSION   DAPGWB010000349 DAPGWB010000000
VERSION     DAPGWB010000349.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.355"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..180
                     /locus_tag="RHX79_004769"
     CDS             <1..180
                     /locus_tag="RHX79_004769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase"
                     /protein_id="HDV2199825.1"
                     /translation="KRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFD
                     DNEIITSAIDKLKRS"
     gene            208..1166
                     /locus_tag="RHX79_004770"
                     /pseudo
     CDS             208..1166
                     /locus_tag="RHX79_004770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312497.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
     gene            1178..>1311
                     /locus_tag="RHX79_004771"
     CDS             1178..>1311
                     /locus_tag="RHX79_004771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDV2199826.1"
                     /translation="MKACLLLFFYFSLIGQLHGADVKIKENESVMGSTAMTYDLSEEK
                     L"
BASE COUNT          387 a          254 c          331 g          339 t
ORIGIN      
        1 aaaagggttt tatctgtttt atgcgatgag ttaaaaaaaa atactgttta tgatgatatc
       61 attgaagctg cgggtgaatt aggtgataaa acgctacttc ctgttttaga tactatgttg
      121 tacaagtttg atgacaatga aattataact tccgctattg ataagctgaa gcgttcatag
      181 cgtgagttgc ctatgcacag tgggggattc ccgccggcac ggtgcagatg ctcgaccggc
      241 tggaaagtga aatcctggct gaccgggtga gtgaggaaag ccgccgctgg ctggcatcgt
      301 gcggcctgac cgtggagcag atgaaaaacc agatggaccc ggtgtacacg ccggcgcgaa
      361 aaatccacct gtaccactgc gaccatcgcg gcctgccgct ggcgctcatc agcacggaag
      421 gggcaacagc gtggtgcgca gaatatgatg aatggggcaa cctgctgagt gatgagaacc
      481 cgcatcatct gcagcagctc attcgcctgc cgggtcagca gtatgatgag gagtccggcc
      541 tgtattacaa ccgccaccgc tattatgacc cgctgcaggg gcggtatatc actcaggatc
      601 cgattgggct gaagggggga tggaattttt atcagtatcc gttgaatccg gtcataaatg
      661 tagatccgca aggtttggtt gatataaatt tataccccga aagtgatctt atccattctg
      721 tagctgatga gattaatatc ccaggcgttt tcacaatcgg ggggcatggt acccccacat
      781 ctattgaatc cgcaacgcgc agtatcatga cagctaaaga tctagcatat ctaattaaat
      841 ttgatgggaa ttataaagat gggatgacag tttggttatt ttcttgtaat acaggtaaag
      901 gacaaaattc atttgctagc caattagcta aagagttaca tacaaatgta ataggacctg
      961 acacgctatg gacgtggtgg gggcgaggaa ctaatggtaa gttaaaaatg gatacagtgc
     1021 taacagcacc aacgaacctt aattcaaata aggatctaat ggctataaca acaaaagacc
     1081 ttggtaattg gataacatat gggccatctg ggcaccccat ttctaatatg caaggtacgc
     1141 cagaaaaacc cagtgatata agataggttg tagatgtatg aaagcatgct tgttactatt
     1201 tttttatttt tctcttattg gtcaattgca tggtgctgat gtgaaaataa aagaaaacga
     1261 aagtgtgatg ggatctacag caatgaccta tgatttaagt gaagaaaagc t
//
LOCUS       DAPGWB010000350         1309 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.356, whole genome shotgun sequence.
ACCESSION   DAPGWB010000350 DAPGWB010000000
VERSION     DAPGWB010000350.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.356"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(25..366)
                     /gene="trbJ"
                     /locus_tag="RHX79_004772"
     CDS             complement(25..366)
                     /gene="trbJ"
                     /locus_tag="RHX79_004772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbJ"
                     /protein_id="HDV2199827.1"
                     /translation="MPPVLWRGWIPFCRCTEGKKVRNKQVVLLIAGISGIATGIIVSL
                     NIPFIHQGLFYPASPVEIVVSLCLTFSVSVVFFVGAIVGWISVSEIYYSRRTGLNELS
                     EISEGTYNERK"
     gene            complement(296..841)
                     /gene="trbB"
                     /locus_tag="RHX79_004773"
     CDS             complement(296..841)
                     /gene="trbB"
                     /locus_tag="RHX79_004773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000052622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly thiol-disulfide isomerase TrbB"
                     /protein_id="HDV2199828.1"
                     /translation="MSLTKSLLFTLLLSAAAVQASPRDEIERLWNPQGMATQPAQPAA
                     GTSARTAKPAPRWFRLSNGRQVNLADWKVVLFMQGHCPYCHQFDPVLKQLAQQYGFSV
                     FPYTLDGQGDTAFPEALPVPPDVMQTFFPNIPVATPTTFLVNVNTLEALPLLQGATDA
                     AGFMARMDTVLQMYGGKKGAK"
     gene            complement(828..1112)
                     /gene="traQ"
                     /locus_tag="RHX79_004774"
     CDS             complement(828..1112)
                     /gene="traQ"
                     /locus_tag="RHX79_004774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001617873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     chaperone TraQ"
                     /protein_id="HDV2199829.1"
                     /translation="MISKRRFSLPRLDITGMWVFSLGVWFHIVARLVYSKPWMAFFLA
                     ELIAAILVLFGAYQVLDAWIARVSREEREALEARQQAMMEGQQEGGHVSH"
BASE COUNT          348 a          339 c          319 g          303 t
ORIGIN      
        1 ctgattttga gttcaggatt atttttattt tctctcatta taagttccct ctgatatttc
       61 cgataattca ttcagaccag tcctgcggct gtaatatatt tcagacaccg aaatccatcc
      121 cacaattgcc cccacaaaaa acacaacaga aacagaaaag gtaaggcaca gcgaaacgac
      181 aatttctaca gggctggcgg gataaaaaag cccctgatgg ataaagggga tattcaggct
      241 gacgattatt cccgtcgcga tgccggatat tccggcaatg agtaacacca cctgcttatt
      301 tcgcaccttt tttccctccg tacatctgca gaacggtatc catccgcgcc ataaaaccgg
      361 cggcatccgt tgccccctgt aaaagcggta atgcctcaag cgtgttgacg ttgaccagga
      421 aggtggtcgg tgtggccacc ggaatattcg ggaagaaggt ctgcatcacg tccggtggca
      481 ccggtaatgc ttccggaaag gcggtatccc cctgaccatc cagggtgtag ggaaaaacgg
      541 aaaagccgta ctgctgtgcc agctgcttca gtaccgggtc aaactggtga cagtaagggc
      601 aatgcccctg cataaacagc accaccttcc agtcggccag gttaacctgc ctgccattac
      661 tgaggcggaa ccagcgggga gccggctttg ctgtcctggc tgacgtgcct gctgccggtt
      721 gtgcaggctg cgtagccata ccctgcggat tccagagtcg ctctatttca tcccgggggg
      781 aggcctgcac agcagcggcg ctcagcaaca gggtgaacag cagtgattta gtgagagaca
      841 tgtccgccct cctgctgccc ttccatcatg gcctgttgcc tggcttccag tgcctcacgc
      901 tcttcccggc tgacacgggc aatccatgca tccagcacct ggtatgcgcc gaacagtacg
      961 agaatggccg caatcagctc cgccagaaaa aaagccatcc agggtttgct gtaaacaaga
     1021 cgggcgacga tatgaaacca gacacccagg gaaaataccc acattcccgt aatatcaagc
     1081 cggggtaaag agaatctgcg tttacttatc atgttaaact ccggttatta tttacatgag
     1141 agtattcatg tctgtaatat tcgcgtttgt gtgatattaa tcagaggtac aaatggaaaa
     1201 gcgatctttt aaagaaaaac tggaaataat cagaaacata ataagagagt cgttactggg
     1261 aaatgcggca attattgcgc tgatatatgc agcatcacat tcattaccg
//
LOCUS       DAPGWB010000351         1288 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.357, whole genome shotgun sequence.
ACCESSION   DAPGWB010000351 DAPGWB010000000
VERSION     DAPGWB010000351.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1288)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.357"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            156..659
                     /locus_tag="RHX79_004775"
     CDS             156..659
                     /locus_tag="RHX79_004775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin-like protein"
                     /protein_id="HDV2199830.1"
                     /translation="MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLR
                     AQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLA
                     QLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN
                     VVSHQLH"
     gene            complement(738..989)
                     /locus_tag="RHX79_004776"
     CDS             complement(738..989)
                     /locus_tag="RHX79_004776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2766 domain-containing protein"
                     /protein_id="HDV2199831.1"
                     /translation="MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQ
                     LKNIDFTNHPAAADPVTMRAIQKAIALIELKFTPQGESH"
     gene            complement(1104..1190)
                     /gene="azuC"
                     /locus_tag="RHX79_004777"
     CDS             complement(1104..1190)
                     /gene="azuC"
                     /locus_tag="RHX79_004777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein AzuC"
                     /protein_id="HDV2199832.1"
                     /translation="MKLRKILKSMFNNYCKTFKDVPPGNMFR"
BASE COUNT          346 a          298 c          287 g          357 t
ORIGIN      
        1 tacccgttca gacgttattc ttatttcaga tcatcgtcag aattgactcc acgatcacat
       61 ttcggaccgg cagaaaggaa ttattctgca aacagtaatt atggtgtttt gatttatctt
      121 gcacctctcc acttctggat ataaggatat taggtatggc aaccgctgga atgcttctca
      181 aactcaactc tcaaatgaac cgcgagtttt acgcatccaa tctctacctt cacctgagta
      241 actggtgttc tgaacagagt ctgaacggca ccgccacttt ccttcgcgcc caggcacaga
      301 gtaatgtgac ccaaatgatg cgcatgttta actttatgaa gagtgtcggc gctaccccca
      361 tcgttaaagc cattgatgtt cccggtgaaa aactgaactc tctggaagaa ctgttccaaa
      421 aaacgatgga agaatacgag caacgttcta gtacgttggc acagttagcc gatgaagcga
      481 aagaactgaa tgatgattca accgtcaatt tcctgcgcga tctggaaaaa gaacagcagc
      541 atgatggtct gttgctgcaa accattcttg atgaagtgcg cagtgcgaaa cttgcgggta
      601 tgtgccctgt gcagaccgac caacatgttc tgaatgtcgt gtcacaccag ctgcattgat
      661 catcatcggc gctaatgcat tgcgccgatg aaggttttga gaaaccgctg cctcatctgt
      721 ttgaagcagc ggttttttta atgggattca ccctgtgggg taaacttgag ttcaataagc
      781 gcgatggctt tttggattgc ccgcatggtg accgggtctg cggcggcggg atggttagta
      841 aagtcgatat tcttcagctg actggacatt ttttcacgaa cttcaacggg cgcgattaca
      901 tcgagaacat ccagaatttg tttgataacc aactggcaag caaccacatc agaaaccagt
      961 tcctgatcgg cattcagcgg ctgggacatc gtaaactcct gatagcattt tgaaagccgt
     1021 tatagtagcg gcttcacatc ttcagcgata gtcacatcca ccgtcatcag gacacaaaaa
     1081 aacctgccgg agcaggtttt ttgttatcgg aacatattgc ctggcggtac gtctttgaac
     1141 gtcttgcaat agttattgaa catacttttc aggattttgc gcagtttcat cgcggcactc
     1201 cgaccatttg ttatacaggt gttattgtct ttgcgcttat aatatgacaa ccatcacaaa
     1261 aatcaatctt tatgtgatgc aaatcaca
//
LOCUS       DAPGWB010000352         1286 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.358, whole genome shotgun sequence.
ACCESSION   DAPGWB010000352 DAPGWB010000000
VERSION     DAPGWB010000352.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.358"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..773
                     /locus_tag="RHX79_004778"
                     /pseudo
     CDS             1..773
                     /locus_tag="RHX79_004778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000420980.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="ISAs1 family transposase"
     gene            803..1255
                     /locus_tag="RHX79_004779"
     CDS             803..1255
                     /locus_tag="RHX79_004779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016247180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199833.1"
                     /translation="MLVGAAVGAVVIGGGIVIYNNREAVGDAIEKSMEMRGEAELLNA
                     QSQMEFWRDPYGAFSSVFGNDDSSKENPNVGKDLTDEEKNCLGSGSTGGSGGWEPDED
                     GEIRNTYRSIKDAPQYPRGVRNVQNGTTRNVVKDQQLLKQLRKVDSGK"
BASE COUNT          418 a          206 c          355 g          307 t
ORIGIN      
        1 caggggagcg attcatgtca ttagtgcgtt ctcaacaatg cacagtctgg tcctcggaca
       61 gatcaagacg gatgagaaat ccaatgagat tacagccatt cctgaacttc ttaacatgat
      121 ggatattaaa ggaaaaatca tcacaactga tgcgatgggc tgccagaaag atattgcaga
      181 aaagatacaa aaacagggag gtgattattt attcgcggta aaaggaaacc aggggcggct
      241 aaataaagcc tttgaggaaa aatttccgct gaaagaatta aataatccag agcatgacag
      301 ttacgcaatg agtgaaaaga gtcacggcag agaagaaatc cgtcttcata ttgtttgcga
      361 tgtccctgat gaacttattg atttcacgtt tgaatggaaa gggctgaaga aattatgcgt
      421 ggcagtctcc tttcggtcta taatagcaga acaaaagaaa gagccagaaa ttgacggtca
      481 gatattatat cagttctgct gatttaaccg cagagaagtt cgccacagca atccgaaacc
      541 actggcacgt ggagaataag ctgcactggc gtctggacgt ggtaatgaat gaagacgact
      601 gcaaaataag aagaggaaat gcagcagaat tattttcagg gatacggcac attgctatta
      661 atattttgac gaatgataag gtattcaagg cagggttaag acgtaagatg cgaaaagcag
      721 ccatggacag gaactatctg gcgtcagtcc ttgcggggag cgggctttcg taatcttgcc
      781 ctgggtagga ggccctccag ggatgttagt cggtgcggca gttggagcgg tggttattgg
      841 tggtggtata gtaatataca acaatcgcga ggctgttggg gatgcgattg agaaaagtat
      901 ggagatgcgg ggtgaagccg aattattaaa tgcacaaagt caaatggaat tctggcgaga
      961 tccctatggt gctttttcca gcgtgtttgg aaatgatgat tcatcaaaag agaatccaaa
     1021 tgtcgggaag gatttgacgg atgaagagaa gaactgtttg ggcagtggca gtacaggagg
     1081 ttcgggaggg tgggagccag atgaggatgg cgaaataaga aatacctaca ggtctattaa
     1141 ggatgctcct cagtatccca gaggggttag gaatgtccaa aatggcacta caaggaatgt
     1201 tgtaaaggat cagcagttat tgaaacaatt acgtaaagta gattcaggaa aatagagtaa
     1261 agtttataaa gatggatttg atgcgt
//
LOCUS       DAPGWB010000353         1261 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.359, whole genome shotgun sequence.
ACCESSION   DAPGWB010000353 DAPGWB010000000
VERSION     DAPGWB010000353.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.359"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            126..884
                     /locus_tag="RHX79_004780"
     CDS             126..884
                     /locus_tag="RHX79_004780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiY family protein"
                     /protein_id="HDV2199834.1"
                     /translation="MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFE
                     GNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGG
                     RSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
                     DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHF
                     GLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYSM"
     gene            complement(937..1044)
                     /locus_tag="RHX79_004781"
                     /pseudo
     CDS             complement(937..1044)
                     /locus_tag="RHX79_004781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588455.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          319 a          287 c          293 g          362 t
ORIGIN      
        1 tacattgcta agttattcgc gcctttttat aattcgttac ctttccaggg acgctaatct
       61 ttgatcctta agaaagtttc cgggaccgcg atggtctctt tttttgttgt acggactctt
      121 gataaatgaa gcttttgaag acagttcctg ccatcgttat gttggcgggg ggcatgtttg
      181 cgtcactgaa tgcagctgcc gatgattccg tttttactgt catggacgat cctgccagcg
      241 ctaaaaaacc tttcgaaggt aatctgaacg caggatatct tgcacaatca ggcaatacga
      301 aaagctcctc acttacggct gacaccacca tgacctggta tggacaaacc actgcctggt
      361 cgctgtgggg gaacgccagt aatacttctt ctaatgatga gcgttcttca gaaaaatatg
      421 cggcgggcgg gcgtagccgt tttaatttaa ctgattatga ctatttattt ggtcaggcaa
      481 gctggctgac agaccgttat aacggctatc gagagcgcga tgtgttgacc gcgggttatg
      541 gtcgtcagtt tttgaatggc ccggtacaca gtttccgctt tgaattcggt ccaggtgtgc
      601 gttacgacaa atataccgac aatgccagtg aaactcagcc gctgggctat gcctccggtg
      661 cttatgcatg gcagttgact gacaacgcta aatttacgca gggtgtttcc gtctttggcg
      721 cggaagacac aacgctgaac tccgaaagcg cattaaatgt tgctattaat gaacattttg
      781 gactgaaagt ggcttacaac gtcacatgga actctgaacc tccagagtct gcaccggaac
      841 ataccgatcg tcggacaacc ttatcgctgg gctacagcat gtaaaattat ctgccggacc
      901 gtgttatgcg gtctggctgt cttcgtttgt cactgctcag ccccaaatca ttgctgccca
      961 acgtagcaac aacatagcgc cacagattgc cagtagcacc accaccatct ttcagtgttt
     1021 tttatcaaag cgtttagtcg gcataccagt gtcctgcata tctcttgtgc gtgataacgg
     1081 agtgtaacaa aagggacagg catcaaggga ttttttgtta ttacagccgt cgggtggcgt
     1141 tgtacacctg atcactgttt ctgcgtttta tgaaaaaaat aaaattatgt atcgatatac
     1201 aaatatcata aatagctggt tataaatacg tttttagttc atcagcacta aaactcaggc
     1261 t
//
LOCUS       DAPGWB010000354         1251 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.360, whole genome shotgun sequence.
ACCESSION   DAPGWB010000354 DAPGWB010000000
VERSION     DAPGWB010000354.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.360"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            134..736
                     /locus_tag="RHX79_004782"
     CDS             134..736
                     /locus_tag="RHX79_004782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDV2199835.1"
                     /translation="MLAFCRSSLKSKKYFIILLALAAIAGLGTHAAWSSNGLPRIDNK
                     TLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFD
                     LYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNH
                     CLTYIAKNKRDATFKPDYLDGLVMHVEKGKVYLDGEFVNH"
     gene            complement(775..1200)
                     /gene="nudI"
                     /locus_tag="RHX79_004783"
     CDS             complement(775..1200)
                     /gene="nudI"
                     /locus_tag="RHX79_004783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase NudI"
                     /protein_id="HDV2199836.1"
                     /translation="MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWALSGGGVESGE
                     RIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSAN
                     REVKINEEFQDYAWVKPEDLVHYDLNVATRKTLRLKGLL"
BASE COUNT          344 a          281 c          265 g          361 t
ORIGIN      
        1 tttggcaaaa ttttgaggca ttttgccgac atcgtaggat ttttaatatt acaccaactg
       61 ctaattatcg ccagaaatgt cgctcaattt tacggtaatt gtctggttgc gcttgtctat
      121 aggtggagtt tacgtgttag ctttttgccg ctcatcattg aagtcaaaaa aatatttcat
      181 cattttactg gcgctcgctg caattgccgg actgggtact catgccgcct ggagtagcaa
      241 tggtttgcca cgtatcgaca ataaaacatt ggccagactg gcacagcagc acccggttgt
      301 cgttttgttt cgccatgctg aacgttgcga tcgttcaacc aatcaatgct tgtcagataa
      361 aacaggtatt acggttaaag gtacccagga tgcccgtgaa ctgggcaacg cttttagcgc
      421 tgacatccct gatttcgatc tttattccag taataccgtc cggaccattc agtcggcgac
      481 ctggttttcc gcgggtaaaa agctgacggt agataaacga cttcttcagt gcggtaatga
      541 gatttatagt gcaattaagg acttacaaag caaagcgcct gataaaaata tcgttatttt
      601 cacccataat cattgcctga catatattgc taaaaataag cgtgatgcga catttaaacc
      661 tgattatctg gatggtttag tcatgcatgt ggaaaaaggc aaagtttatc tggatgggga
      721 attcgttaac cactaaattt tcaatctgac agccagtgat ggctgtcatc attgttaaag
      781 aagacctttc aaacgtaacg tttttcgggt ggcaacattt aaatcataat gcaccagatc
      841 ttcaggtttt acccacgcgt agtcctgaaa ctcttcgttt attttcactt ctcggttggc
      901 agaaacgcag tcaaaaatca ggtaaatcat ataaatctct tccttgcgac catctgcata
      961 cgtcttggtg cgaatatcat cgctgaaggt ccacggcgtg atttctgtca aaagcagctg
     1021 ttctcccagt tcttcgcgaa tttcgcggcg tagtgcctct tcaattcgtt cgccagactc
     1081 cacgccgcca cccgaaagcg cccattgacc ggggaaaacg ccgcgatcgt cggccatttt
     1141 acacagcaaa taagcaccat cattttgaat caaagggcat acaatagtcc gttgtcgcat
     1201 aggggtattc cttataaata aaaagaaacc atgagaatac ggtaactcag a
//
LOCUS       DAPGWB010000355         1236 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.361, whole genome shotgun sequence.
ACCESSION   DAPGWB010000355 DAPGWB010000000
VERSION     DAPGWB010000355.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1236)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.361"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            135..1236
                     /locus_tag="RHX79_004784"
                     /pseudo
     CDS             135..1236
                     /locus_tag="RHX79_004784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027427.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
BASE COUNT          442 a          173 c          299 g          322 t
ORIGIN      
        1 tgagagcaag ggacggggca gggcaagatc atgaaaattg tgatgtaaat cacgattttc
       61 atcttggctt taacgcctac aggtgatcaa aatttaacct ttggaataac taaaaagata
      121 aaaaaggacg ccaggtgagt attcaaagtt tgcttgatta tatttcagtg atccctgata
      181 tacgacaaca aggaaaggtt aaacataaat tatctgctat tttgtttctc accgtatgtg
      241 cagtaattgc aggtgccgat gagtggcagg aaattgaaga ttttggacat gaaagacttg
      301 aatggctaaa gaaatatggt gattttgata atggcattcc ggtcgatgac accattgcac
      361 gcgttgtgag taacattgac agtttggcct ttgaaaagat gtttattgaa tggatgcagg
      421 agtgccatga aatcactgat ggtgaaatta tagcaataga tggaaagacc ataagaggct
      481 cctttgataa gggaaaaaga aaaggagcaa tccatatggt gagtgcattc tcgaacgaaa
      541 atggtgttgt actggggcag gtgaaaacgg aagccaaaag taatgagatt acagccattc
      601 cagagttgct taacctactg tatttaaaga aaaatttgat aaccattgat gctatgggct
      661 gtcagaaaga tatcgcttcg aagatcaaag ataaaaaagc agattatctt ctggcagtaa
      721 aaggcaatca ggggaaatta catcatgcat tcgaggaaaa atttcctgta aatgtgtttt
      781 ctaattataa aggcgattcg tttagtacgc aggagataag tcatggaaga aaagaaacac
      841 gtttgcatat tgtcagtaac gtaacgcctg aacttttgtg attttgaatt cgaatggaag
      901 ggattaaaaa agctttgtgt agcattgtca ttcaggcaga agaaagaaga taaatcagca
      961 gaaggtgtaa gcatccgata ttatatttca tcaaaggata tggatgctaa agaatttgca
     1021 catgctatca gagcgcactg gctgatcgag cacagtcttc attgggtgtt agatgtaaaa
     1081 atgaatgaag atgccagccg gataagaaga ggaaacgcag cctaaataat atctggaata
     1141 aagaagatgg cactgaattt attaagggat tgcaaagaca ttaagggtga agaggaaaag
     1201 aaagaaggct gcgttaaaca cagggaaaga tcatca
//
LOCUS       DAPGWB010000356         1233 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.362, whole genome shotgun sequence.
ACCESSION   DAPGWB010000356 DAPGWB010000000
VERSION     DAPGWB010000356.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.362"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            33..1130
                     /gene="ompC"
                     /locus_tag="RHX79_004785"
     CDS             33..1130
                     /gene="ompC"
                     /locus_tag="RHX79_004785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HDV2199837.1"
                     /translation="MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKH
                     YFSSNDADDGDTTYVRLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAF
                     AGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNN
                     DFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRT
                     DTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKA
                     QNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVD
                     YKINLLDKNDFTKALGVSTDDIVAVGLVYQF"
BASE COUNT          348 a          270 c          274 g          341 t
ORIGIN      
        1 ttttaataat agttcaaaaa aaagggctca cgatgaaaaa attaacagtg gcaatttctg
       61 ctgtagctgc atcagtactg atggcgatgt ctgctcaggc agctgaaatt tataataaag
      121 acagtaacaa gctggatctg tacgggaaag ttaatgccaa gcactacttt tcctctaacg
      181 atgcagatga tggtgatact acttatgttc gtctgggctt caaaggcgaa acccaaatca
      241 acgatcagct gactggtttc ggtcagtggg aatatgaatt caaaggcaac cgcgctgaat
      301 ctcaaggttc ctccaaagac aaaacccgtc ttgcatttgc aggcctgaaa ttcggtgact
      361 acggctcaat cgattacggc cgtaactacg gtgtagcata cgacatcggt gcgtggactg
      421 acgttctgcc agaattcggt ggcgatacct ggacccaaac agatgtgttc atgactggtc
      481 gcaccactgg tgttgcaacc tatcgtaaca acgacttctt tggtctggtt gatggtctga
      541 actttgctgc tcagtaccaa ggcaaaaacg atcgtagcga tttcgataac tacaccgaag
      601 gtaacggtga tggcttcggt ttctctgcta cctatgaata cgaagggttc ggtatcggtg
      661 caacttatgc gaaatctgat cgtaccgaca ctcaagttaa tgcagggaaa gttcttcctg
      721 aagtatttgc ttccggtaaa aatgcagaag tttgggccgc aggtctgaaa tatgacgcta
      781 acaacattta cctggccact acctattctg aaacccagaa tatgactgta tttgctgatc
      841 acttcgttgc taataaagct caaaacttcg aagctgttgc acaatatcag ttcgatttcg
      901 gtctgcgtcc gtccgttgct tacctgcaat ctaaaggtaa ggatcttgga gtatggggcg
      961 atcaggactt agtcaaatat gttgatgtag gtgcaaccta ttacttcaac aaaaatatgt
     1021 ctactttcgt tgattacaaa atcaacctgc ttgacaaaaa tgacttcact aaagcactcg
     1081 gtgtaagcac tgatgacatc gttgctgtag gtctggttta ccagttctaa tctgattacg
     1141 aaaaagatat gttgcgggag gctttgcctc cccaacatat aagtggctcc ctcaagccac
     1201 ttcctttagg agcacaacct tgcttctaac tat
//
LOCUS       DAPGWB010000357         1221 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.365, whole genome shotgun sequence.
ACCESSION   DAPGWB010000357 DAPGWB010000000
VERSION     DAPGWB010000357.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.365"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            13..648
                     /gene="tetR(C)"
                     /locus_tag="RHX79_004786"
     CDS             13..648
                     /gene="tetR(C)"
                     /locus_tag="RHX79_004786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(C)"
                     /protein_id="HDV2199838.1"
                     /translation="MIRTALELLNDVGMEGLTTRRLAERLGVQQPALYWHFKNKRALL
                     DALAEAMLTINHTHSTPRDDDDWRSFLKGNACSFRRALLAYRDGARIHAGTRPAAPQM
                     EKADAQLRFLCDAGFSAGDATYALMAISYFTVGAVLEQQASEADAEERGEDQLTTSAS
                     TMPARLQSAMKIVYEGGPDAAFERGLALIIGGLEKMRLTTNDIEVLKNVDE"
     gene            635..949
                     /locus_tag="RHX79_004787"
     CDS             635..949
                     /locus_tag="RHX79_004787"
                     /inference="COORDINATES: protein motif:HMM:NF024949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2199839.1"
                     /translation="MLTNDRGRQVRRARLLRHMKQSHLAELMGVDQATVSRWERGTLA
                     LSDGRWSAVLQLLTGPSDSSYDAALKRLVQSSAHKVHLVATGHIVCSRHLRPGKGNCG
                     LT"
BASE COUNT          248 a          330 c          387 g          256 t
ORIGIN      
        1 caacgcgagg ccgtgatccg aaccgcgctc gaactgctta acgacgtggg catggaaggt
       61 ctaacgacgc gccgactggc tgagcgcctc ggggtgcaac agccagcgct ctactggcat
      121 ttcaagaaca agcgtgcgtt gctcgacgca cttgccgaag ccatgctgac gataaatcac
      181 acgcattcga cgccaaggga tgacgacgac tggcgttcgt tcctgaaggg caatgcatgc
      241 agttttcgac gggcgttgct cgcttatcgc gatggcgcgc gtattcatgc cgggacgcgg
      301 ccagccgcgc cgcagatgga aaaagccgac gcgcagcttc gcttcctttg cgatgctggc
      361 ttttcggcag gtgacgcgac ctatgcgttg atggcaatca gctacttcac cgtcggcgct
      421 gttcttgagc agcaagctag cgaggcagac gccgaggagc ggggcgaaga tcagttgacc
      481 acctcagcgt ctacgatgcc ggcgcgccta cagagcgcga tgaaaatcgt ctacgaaggc
      541 ggtccggacg cggcattcga gcgaggcctg gctctcatca tcggcggtct tgaaaaaatg
      601 aggctcacta cgaacgacat tgaggtgctg aagaatgttg acgaatgaca gggggcggca
      661 ggtgcggagg gcgcggttgc ttcgtcatat gaagcaaagt cacctagctg aattaatggg
      721 tgtggatcag gcaaccgtgt cgcgctggga gcggggcacc cttgcattgt cggatgggag
      781 gtggtcagcg gttcttcaat tgcttaccgg gccttccgat tcatcgtacg acgctgcgct
      841 gaagcgtctg gtgcaatcct ccgcccacaa agtccatctg gtagcgaccg gacacattgt
      901 ttgctcgcgg catctccggc caggcaaagg gaattgcgga ttgacctagc cgaactcctt
      961 ggtaaatcgc tgcgtgttta tgcgtccccg agatagttgc ggccgactct gcgcttaatg
     1021 ggctcggttg gcatgagggg cggctggggt cactcgaggt ggataccggc ccgaactgga
     1081 gcgaggaact tccatactgc caaggcgaat gctgtgggag cgcatcatgc tcgctgatgg
     1141 tagcccggca ctacttgtta ccaccacagc ttaatgcgaa gggtgctcct gttcttgtgc
     1201 atattttatg cgctgctgat t
//
LOCUS       DAPGWB010000358         1218 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.366, whole genome shotgun sequence.
ACCESSION   DAPGWB010000358 DAPGWB010000000
VERSION     DAPGWB010000358.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.366"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..813
                     /locus_tag="RHX79_004788"
     CDS             <1..813
                     /locus_tag="RHX79_004788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDV2199840.1"
                     /translation="LTLVTMTMQDHATLKEIKDLAKNITQQYGTPDLCIEAMRKKNLK
                     TMIFISQLKAKTNFQVVGLTMKCYSPLCKNASRMDQNLRAPVPMTWAFMMREAGFPAV
                     RPIYELPLSEDVLDEVREEMRSLGSYIALNLEGSSQERTFSLSIAENLIAKIQSETDI
                     PIVIVHGPKGEDKARVLVDCYNNVYRLSLSPSIKRSAAIIKDAYIAITPDTSILHMAS
                     AYNTPVVAIYADYKTRWPAMADVSESVVVGQKIDNISLDEFAKALKSVLARI"
BASE COUNT          393 a          232 c          266 g          327 t
ORIGIN      
        1 ttaacattag tcacaatgac tatgcaggat cacgcaacat taaaagaaat aaaagattta
       61 gcaaagaaca taacacagca atacggtacg ccggatcttt gtatagaggc gatgcgtaaa
      121 aagaacctga aaacgatgat atttatcagt cagttgaaag caaaaacgaa ttttcaggtt
      181 gttggtttaa ccatgaagtg ctactcccct ttgtgcaaga acgcgtcccg gatggatcag
      241 aatctccggg ctcccgtacc catgacatgg gcatttatga tgcgtgaggc gggttttcca
      301 gcagtcaggc caatatatga attgccacta agtgaggatg tactcgatga ggtgcgcgag
      361 gaaatgcgat cgttaggatc ttacattgcg cttaatttag aaggtagctc gcaggaacgt
      421 acattttcat tatcgattgc agaaaatcta atagcaaaaa ttcaaagtga aacagatata
      481 ccaatagtga tcgttcatgg accaaaaggg gaagataaag ccagggtatt agtggattgt
      541 tataataatg tctaccgttt atccttatca ccctcgatta aacgttcagc agcaatcata
      601 aaagatgctt atatcgcaat aactcctgac acctcaatat tacatatggc aagtgcctat
      661 aatactcccg ttgttgcaat ttatgctgat tacaaaacgc gatggcccgc aatggccgat
      721 gtttcggagt cagtcgtcgt tgggcaaaaa attgacaata taagtctgga tgaattcgca
      781 aaggcattaa aaagtgtttt ggcgagaata tgagacagta cttatgcata gtaatgccga
      841 tctgttatga acggtggtgt catcaatact ctgaggctgg tcaatcatca cagaaaacca
      901 gcctttggat caaagctgta ctcaccggat acgatcatag tcacatcgaa cgcgattctt
      961 gcggtgcagc agatttattt attcattttc tgtgagagaa gggcaagctc tatagaggga
     1021 atgtaaaaaa gagtgctccg aatggagcac tctttaagaa attataacgg aaaatcacag
     1081 gtttttataa catgtcgcat aagcaaaccc aagcttttca aatacgcttt gatcacctgt
     1141 tgccagggaa actacgtatt gttcgcttga gtttgcggga ctagatgacc aatacatatt
     1201 tgattgaaaa ccagcttc
//
LOCUS       DAPGWB010000359         1215 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.367, whole genome shotgun sequence.
ACCESSION   DAPGWB010000359 DAPGWB010000000
VERSION     DAPGWB010000359.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.367"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            57..779
                     /gene="sdiA"
                     /locus_tag="RHX79_004789"
     CDS             57..779
                     /gene="sdiA"
                     /locus_tag="RHX79_004789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SdiA"
                     /protein_id="HDV2199841.1"
                     /translation="MQDTDFFSWRRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSL
                     CVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE
                     AQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSTREIPILSDELQLKMQLLVRE
                     SLMALMRLNDEIVMTPEMNFSKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNM
                     QKKINAPNKTQVACYAAATGLI"
     gene            complement(846..1070)
                     /locus_tag="RHX79_004790"
     CDS             complement(846..1070)
                     /locus_tag="RHX79_004790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2594 family protein"
                     /protein_id="HDV2199842.1"
                     /translation="MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLK
                     MEKQLALIEDETQAAVFSKTVKQIKQAYRQ"
     gene            complement(1057..>1215)
                     /locus_tag="RHX79_004791"
     CDS             complement(1057..>1215)
                     /locus_tag="RHX79_004791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199843.1"
                     /translation="GHYINVFYSTADITLKKQPLLFLAKLMVYSAALTFFTANFHCNM
                     TRKINEYA"
BASE COUNT          321 a          261 c          292 g          341 t
ORIGIN      
        1 atagtttgaa ttatcattat aaatgatact cactctcagg ggcgttgcgg tttactatgc
       61 aggatacgga ttttttcagc tggcgtcgca cgatgctgtt gcgttttcag aggatggagg
      121 ccgcagaaga ggtctaccat gaaatagagc ttcaggctca gcagctggag tacgattact
      181 attcgttatg tgttcgccac ccggtaccat tcacgcgacc taaagtggct ttctacacca
      241 attaccctga ggcgtgggtt agttattatc aggcaaaaaa ctttctcgca attgatccgg
      301 tgctgaaccc tgaaaacttt agtcagggcc atttaatgtg gaatgatgac ttattcagcg
      361 aagcacagcc gttatgggaa gccgcgcgcg cacatggttt acgccgcggt gtcactcagt
      421 atttaatgct gccaaatcgg gcgctgggct ttttgtcctt ttcccgttgc agcacgcgcg
      481 aaatacccat tcttagtgat gaactgcaat taaaaatgca gttactggtg cgcgaaagtc
      541 tgatggctct gatgcgttta aatgatgaaa tagtgatgac gccagagatg aatttcagca
      601 agcgcgaaaa agaaattctg aaatggacgg cggaagggaa gacatcagca gagatagcga
      661 tgattttgtc aatctctgag aatacggtca atttccatca gaaaaacatg cagaaaaaaa
      721 tcaatgcacc aaataagacc caggtggcct gttacgcggc cgctactggc ttaatttgat
      781 cgcttttctt tctgcgtgcc agatgcaaaa accggctgaa aggcacgctc tcagccggtt
      841 ttatattact gacggtaggc ttgtttaatt tgcttaaccg ttttggaaaa tactgcagcc
      901 tgggtttcgt cttcgatcag cgcaagctgt ttttccatct ttaacatcac gcggcccgcg
      961 tcagcttgtc ccatcgcctg cagcatcagc gtcagcatcg ctttcaggca ggagacttca
     1021 tttgccagtt cttgattatt ctcggcagta gaaaaatcag gcgtactcat ttattttcct
     1081 cgtcatgttg caatgaaaat ttgcggtgaa aaatgttaag gcggcggagt ataccataag
     1141 ctttgctaaa aatagcagtg gttgtttttt gagcgtgata tcggcagtgc tataaaatac
     1201 gttaatataa tgacc
//
LOCUS       DAPGWB010000360         1192 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.368, whole genome shotgun sequence.
ACCESSION   DAPGWB010000360 DAPGWB010000000
VERSION     DAPGWB010000360.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.368"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..493)
                     /gene="sfmF"
                     /locus_tag="RHX79_004792"
     CDS             complement(<1..493)
                     /gene="sfmF"
                     /locus_tag="RHX79_004792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria assembly protein"
                     /protein_id="HDV2199844.1"
                     /translation="MRRALFSCFCGLLWISSGWAADPLGTININLHGNVVDFSCTVNT
                     ADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLAL
                     DDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVA
                     KADA"
     gene            complement(504..>1192)
                     /gene="fimH"
                     /locus_tag="RHX79_004793"
     CDS             complement(504..>1192)
                     /gene="fimH"
                     /locus_tag="RHX79_004793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415066.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type 1 fimbrin D-mannose specific adhesin FimH"
                     /protein_id="HDV2199845.1"
                     /translation="MSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLK
                     VIRPFINMVEIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEF
                     DFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAYLTMRLEASAVSGQAMVS
                     DNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFS
                     ALGYLRVDYQ"
BASE COUNT          325 a          320 c          271 g          276 t
ORIGIN      
        1 tcgcatccgc tttcgccaca cctggccgaa caccgctggc taacgctcga taattggcaa
       61 aaaagtttag tgtgacattg ccatttgcat ctacttcctc agtcgggctc gcctccccca
      121 gtgcgagccg ggagcgatcg ctattacgta attcgatggc gacggtttgt gccattgcgg
      181 gatcatccag agccagcagg ttggtatcgg atgccggcgt tcccgtaaat aaaatcgcaa
      241 ctgaacccgg aggacatccc tccagccgca ggctaaaagg gacgagtgcc gtggtatcgc
      301 cagcgttcag taattgtgtc gtaggccatc tgcctaaatc taccgtctta tcaatatccg
      361 cagtgtttac ggtacaggag aaatcaacaa cgttaccgtg caaattgata ttaatcgttc
      421 ccaaagggtc agctgcccat ccactggaaa tccacagtaa cccgcagaaa cagctaaaga
      481 gtgctcttct cattctccgt acctcattga taatcgacgc gtaaataccc cagcgcgcta
      541 aacggccctt cggtcggttt ttgaccggta atactgatag gccaggcgcg aagtgtgaca
      601 ttggctgccg cagctgcatc cagacggaaa ggaataacgc tattgagatc gttaggcgtg
      661 atcggcgtat cgttctgatc ggcgacaata aaacctaaat cctgattgtc cgacaccatc
      721 gcctgaccag aaacggcact ggcttccaga cgcattgtta aataagcctg cgcagcaaca
      781 ttcgtacatt tgaccgcaat gctcttggtt tgcggcatga caccagcagg tcgattaccc
      841 ggccctgccg cactaaataa cgatgcgccg atatcaccaa aatcaaattc aacaatctgc
      901 ccggcattta attcgcagtt ttgcggtact tcaacccggc caccaaaact aatggtataa
      961 acaggtgtaa ccaacggatc gtaaggcgtt gatgtcacat acacggtaaa catcacctgt
     1021 ctggggatct ccaccatgtt aataaaggga cgaataacct ttaaacgaaa tattaaacga
     1081 gaatccatca ccccgaatgg aaggttttgc gaaacgttag gatctgttcc catccgaata
     1141 taattttgcg gggggaactg aatatccata acactatcaa ccagactcat cg
//
LOCUS       DAPGWB010000361         1180 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.369, whole genome shotgun sequence.
ACCESSION   DAPGWB010000361 DAPGWB010000000
VERSION     DAPGWB010000361.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1180)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1180)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.369"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..1175)
                     /locus_tag="RHX79_004794"
     CDS             complement(<1..1175)
                     /locus_tag="RHX79_004794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008502399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter strand-loop-strand
                     O-heptosyltransferase"
                     /protein_id="HDV2199846.1"
                     /translation="MTPPEKPTQSGPEGIRYDFNDGARVLLPEGKWHVRLMDADSGNI
                     LFSCDADNGWVRSCKKYFIRFRIQVFHRGNDTPLMDETLNLKNQPVLISFPTGTLGDL
                     LGWFPYAERFQTLHKCQLECTMAQEIIELLAPQYPQIQFSTPDNPHTITPYATYRVGL
                     YFGGDTTNQPIDFRQVGFHRSAGYILGVDPRESPVRLNLSAPRSINEPYVCIATQSTC
                     QAKYWNNGTGWSEVVAHLKSLGYRVLCIDLHAHYGQGFVWNHIPWGAEDFTGKIPLQE
                     RVNLLHHASFFIGLSSGLSWLAWATHIPVVLISGFTLPVSEFYTPWRIFSSHGCNGCW
                     DDTSLNFDHKDFLWCPRHKNTPRQFECTRLITGKQVNGVIDKLHASLAEQSSIGMNHS
                     "
BASE COUNT          347 a          279 c          248 g          306 t
ORIGIN      
        1 gaatgattca taccaatact actttgttct gccagagagg catgaagttt gtcgatgacg
       61 ccgtttacct gcttccccgt aatcaggcgt gtacattcaa attgtctggg ggtgttttta
      121 tgtctcggac accacagaaa atctttatga tcaaaattca gtgaagtatc atcccagcat
      181 ccgttacatc catgggaact aaatattctc catggggtat aaaattcact gacaggaagc
      241 gtaaaaccac ttattagtac aacagggata tgagttgccc atgccagcca ggagagcccg
      301 ctggataaac caataaaaaa actggcatga tgtaacagat tcacccgttc ctgcagaggt
      361 attttccctg taaagtcttc tgctccccac ggaatatggt tccagacaaa gccctgacca
      421 taatgagcat gcagatcaat acacagtacc cgatacccca gcgatttgag atgggctaca
      481 acctcactcc agccagtacc gttgttccag tatttcgcct gacaagtgga ttgtgtcgcg
      541 atacatacat aaggttcatt aatgcttctg ggggctgaaa gattaagtcg gactggtgat
      601 tcccggggat ccactcccag aatgtatcca gcggaacgat gaaaaccaac ctggcgaaaa
      661 tcaattggct ggttagttgt atcgccacca aaatacagtc ctacacgata agttgcatat
      721 ggcgtaatcg tatgaggatt atctggagta gaaaattgaa tctgcggata ttgcggtgcc
      781 agtagttcaa taatctcctg tgccatagtg cattccagtt gacacttatg tagcgtctga
      841 aacctttcag cataaggaaa ccatccgagt aaatcaccta atgtaccggt aggaaacgaa
      901 atcagcacag gctgattttt taaattcaac gtttcatcca ttaagggcgt gtcgtttccc
      961 ctatggaata cctgaatacg aaaacgaatg aagtattttt tacagctcct tacccagcca
     1021 ttatctgcat cgcagctaaa aagaatgttc cccgaatcag catccatcag acgaacatgc
     1081 catttcccct cagggagcag tacacgcgcc ccatcattaa aatcatatcg gataccctca
     1141 ggtccggact gagtcggttt ctctggcgga gtaataaaat
//
LOCUS       DAPGWB010000362         1122 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.370, whole genome shotgun sequence.
ACCESSION   DAPGWB010000362 DAPGWB010000000
VERSION     DAPGWB010000362.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.370"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            100..606
                     /locus_tag="RHX79_004795"
     CDS             100..606
                     /locus_tag="RHX79_004795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001519435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDV2199847.1"
                     /translation="MAFLLNKSDMASSIGISVQAFDKWGVPPVERRGREVFYDVKTVL
                     EIDRERRQQNQKSSGGENDLEERLLQARVNLTEEQAIAQRLKNQVAEHKVIDTAFSIF
                     ALSRLSGELASVLDSIPLSMQRKFPELTGRQLAYLKELVAKGANKCVESAEKMKEFAD
                     EYYRNTDE"
     gene            578..>1122
                     /locus_tag="RHX79_004796"
     CDS             578..>1122
                     /locus_tag="RHX79_004796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HDV2199848.1"
                     /translation="MSITEIQMNNFVLAVKAGLSVLKRPLPMTPVEWADANYYLPKES
                     AYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTL
                     IWLPTDGDAENFMKTHVEPTIRDIPSLLALAPWYGKKHRDNTLTMKRFTNGRGFWCLG
                     GKAAKNYREKSVDVAGYDELAA"
BASE COUNT          298 a          228 c          307 g          289 t
ORIGIN      
        1 tgatgatctt tcttatacga aaaagcatgt aaaatcagag ggttttacaa aaaacgtggt
       61 tgttgtattg cttttttgcc ggtggtttat ggaggggctg tggccttttt attgaataaa
      121 agcgacatgg cctcctccat cggtatctca gtacaggcat ttgataaatg gggtgttcct
      181 cctgttgagc gccgggggag agaggttttc tatgacgtta aaactgtact ggagatagat
      241 cgcgagcgac gtcaacaaaa ccagaaatct tcaggtggtg aaaatgatct tgaggaaagg
      301 ctacttcagg ccagggttaa cctgacggaa gaacaggcta ttgctcagcg gttaaaaaac
      361 caggttgcag agcataaggt gattgataca gctttctcta tttttgccct gtctcggtta
      421 tccggagaac tggcatctgt tttggacagt attccgcttt cgatgcaaag aaaattccct
      481 gaattgacag gcagacaatt ggcttatcta aaagagctgg ttgcgaaggg ggctaataaa
      541 tgcgttgagt ccgctgaaaa aatgaaggaa tttgcggatg agtattacag aaatacagat
      601 gaataatttc gtattggcag tgaaggcggg tctctcagtc ctgaaaagac cattgccaat
      661 gacccccgtt gaatgggcgg atgccaatta ctatctccca aaagaatccg cataccagga
      721 agggcgctgg gaaacactgc cctttcagcg ggccatcatg aatgcgatgg gcagcgacta
      781 catccgtgag gtgaatgtgg tgaagtctgc ccgtgtcggt tattccaaaa tgctgctggg
      841 tgtttatgcc tacttcatag agcataagca gcgcaacacc cttatctggt tgccgacgga
      901 tggtgatgcc gagaacttta tgaaaaccca cgttgagccg actattcgtg atattccgtc
      961 gctgctggcg ctggccccgt ggtatggcaa aaagcaccgg gataacacgc tcaccatgaa
     1021 gcgtttcact aatgggcgtg gcttctggtg cctgggcggt aaagcggcaa aaaactaccg
     1081 tgaaaagtcg gtggatgtgg cgggttatga tgaacttgct gc
//
LOCUS       DAPGWB010000363         1116 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.371, whole genome shotgun sequence.
ACCESSION   DAPGWB010000363 DAPGWB010000000
VERSION     DAPGWB010000363.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.371"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..465)
                     /locus_tag="RHX79_004797"
     CDS             complement(<1..465)
                     /locus_tag="RHX79_004797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000068668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199849.1"
                     /translation="MAQQRTTSLRSIPLDLDVKQEAVINGIEMGVLDNGIPYLTQNGL
                     ANVCGVQRLRIKEITDEWAQSVENGIFKKGRMTFIGTYLLNEGFTDEKLYIPIIRNGV
                     EYHAYPDVVCMAILEYYAFEAKQAESETAIRSYRELAKKGLKTFIYEALKYQP"
     gene            complement(670..987)
                     /locus_tag="RHX79_004798"
     CDS             complement(670..987)
                     /locus_tag="RHX79_004798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001567061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199850.1"
                     /translation="MDAGVLVLAVQQSPITKQFTDNELCTLAWLWRAGNVMLIAYQNV
                     THLLQDAEHGEAGHFTSIEQEYPQILNRARAILVRETAHVKLQPWQDDKWSRVLPYLR
                     QIC"
BASE COUNT          320 a          247 c          198 g          351 t
ORIGIN      
        1 cggttgatat tttagcgcct cgtatataaa tgtcttgagg ccttttttag caagctctct
       61 gtaagatcta attgcagtct cactttctgc ttgttttgct tcaaaggcat agtattcaag
      121 tatagccatg catacaacat ctggataagc atggtactca acaccatttc gaattattgg
      181 tatataaagt ttttcatctg taaaaccttc attaagaaga tatgtaccaa taaaagtcat
      241 tcttcctttt ttgaaaatac cgttctcaac agattgagcc cactcatcgg taatttcctt
      301 gattcgcaaa cgctgaacac cacaaacatt tgccaaccca ttctgagtaa ggtacggaat
      361 tccgttatcg agtaccccca tttctatacc gttaatgaca gcctcttgct taacatctaa
      421 gtctaaaggt atggatctga gggaggtagt tctctgttgt gccatttttg atcctatcaa
      481 tttgaattca ttgaaaaaat taggtgttcc ctatgcatta gaacactcat catagtaacc
      541 ccactcgttt gtgaaaaaaa ctaatttcac aatcagttaa ctctcaaaat aactgatatt
      601 catactctcg ctatcccata tatagacatc cttgttttaa tacaacactc atggctggcg
      661 gctatactcc taacagattt gacgcaaata cggcaatact cgactccact tatcatcctg
      721 ccacggctga agttttacat gtgccgtttc tcggacgagg attgctcgcg ctctgttgag
      781 tatctgggga tattcttgct cgatggaagt gaagtgacca gcttcaccat gctccgcatc
      841 ctgaagaaga tgagtaacgt tctggtaggc aattaacatc acattccctg ctcgccataa
      901 ccaggcgagt gtgcaaagtt cgttatcagt gaattgtttt gtgattgggg attgttgaac
      961 tgctagaacg agaacgccag catccattgg cagtccctat agtaaaacca tagctcagga
     1021 cgcttcgttc aggatagata attttattgt acttacctaa ctttcttact atagcacggt
     1081 tgaaaaagtg attattactc aaaaataaac ctcacc
//
LOCUS       DAPGWB010000364         1109 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.372, whole genome shotgun sequence.
ACCESSION   DAPGWB010000364 DAPGWB010000000
VERSION     DAPGWB010000364.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.372"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(64..1008)
                     /gene="leuO"
                     /locus_tag="RHX79_004799"
     CDS             complement(64..1008)
                     /gene="leuO"
                     /locus_tag="RHX79_004799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LeuO"
                     /protein_id="HDV2199851.1"
                     /translation="MPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAH
                     VLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPG
                     SGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQ
                     ETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDR
                     FASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVL
                     PLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR"
BASE COUNT          323 a          261 c          226 g          299 t
ORIGIN      
        1 tctacattca ataaaaaata cagaataaac cagacattca tgtctgacct attctgcatt
       61 cagttagcgt ttgcaaattg agactaattg ctcttccatc cactgatggc ctttatcgcg
      121 cccggcagct tcatgccagg agagataaca ggttctgcta ttttgtttta acggcagcgg
      181 taatacctgt aattctaagg attcagcgaa ctcttcagcc agccaacgcg gcgcaatagc
      241 gaccaaatgc gtttgcgaca ccacgctaag tacgctcatc attgccatgc cctgatacgc
      301 gatactggct tgcttatcta ccgtgtcata ccaaggttga ctaaatgacg cgaaacgatc
      361 gagcgaaacc gccgcatgtt gttcgttata aacatcatgt ttcagtaacg ggcccttaat
      421 tgttggatga tttttgctgg ctaccagcac catttcatct ttaaataatg gcacgctggt
      481 aaattcagga cgatggaagt cttcataact aatcacaaac tccgtttcct gataacgcag
      541 ctgatgttca gtgttctgat ttaatgaaga cttgaacata acatgtatat ttggcgcaat
      601 ctgctcaatg tgattataaa tctgcgaggt cagaatgctg tctaacgggc tgcaaacaca
      661 aagatgaaat acacgttcac tgctcgcggg ttcaaaacct gaaccaggca attcattttg
      721 tactagttgc aatgcctgac gaactgagcc aaaaagttga aatgcgcgag cagtcggttg
      781 aataccacgg ccataacgaa caaaaagctc gtcattaaac atcaccttca ggcgtgcaac
      841 agcgttactg accgcaggtt gcgacatacc cagaacatga gcggcacggg taatgttttg
      901 ctcctgcatc acggcatcga aaacggttaa taagttgaga tcgaccatgc gtagctgtgg
      961 cttgcttaac tccgccgtct ctgaatgatc tgtttgtacc tctggcatac ttaactccac
     1021 tgtcacactt aactcccttt cccttattgg aatgcagaga aataatcctg aagaatatga
     1081 tttatcatgc atataaaata agaaaaagc
//
LOCUS       DAPGWB010000365         1108 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.373, whole genome shotgun sequence.
ACCESSION   DAPGWB010000365 DAPGWB010000000
VERSION     DAPGWB010000365.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.373"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            77..1051
                     /gene="cysB"
                     /locus_tag="RHX79_004800"
     CDS             77..1051
                     /gene="cysB"
                     /locus_tag="RHX79_004800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012017585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HDV2199852.1"
                     /translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL
                     GIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT
                     QARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVM
                     LPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTP
                     RIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRR
                     STFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK"
BASE COUNT          287 a          262 c          266 g          293 t
ORIGIN      
        1 tattaaatcg tattagtcac ccgccaggtg tgacgaaaaa acgatgttct gatggcgtct
       61 aagtggatgg tttaacatga aattacaaca acttcgctat attgttgagg tggtcaatca
      121 taacctgaat gtctcatcaa cagcggaagg actttacaca tcacaacccg ggatcagtaa
      181 acaagtcaga atgctggaag acgagctagg cattcaaatt ttttcccgaa gcggcaagca
      241 cctgacgcag gtaacgccag caggacaaga aataattcgt atcgctcgcg aagtcctgtc
      301 gaaagtcgat gccataaaat cggttgccgg tgagcacacc tggccggata aaggctcgct
      361 gtatatcgcc accacgcata cccaggcacg ctacgcgtta ccaaacgtta tcaaaggctt
      421 tattgagcgt tatccccgcg tttctttgca tatgcaccag ggctcgccga cacaaattgc
      481 tgatgccgtc tctaaaggca atgctgattt cgctatcgcc acagaagcgc tgcatctgta
      541 tgaagattta gtgatgttac cgtgctacca ctggaatcgg gctattgtag tcactccgga
      601 tcacccgctg gcaggtaaaa aagccattac cattgaagaa ctggcgcaat atccgttggt
      661 gacatatacc ttcggcttta ccggacgttc agaactggat actgccttta accgcgcagg
      721 gttaacgccg cgtatcgtct tcacggcaac ggatgctgac gtcattaaaa cttacgtccg
      781 gttagggctg ggggtagggg tcattgccag catggcggtg gatccggtcg ccgatcccga
      841 ccttgtgcgt gttgatgctc acgatatctt cagccacagt acaaccaaaa ttggttttcg
      901 ccgtagtact ttcttgcgca gttatatgta tgatttcatt cagcgttttg caccgcattt
      961 aacgcgtgat gtcgttgatg cggctgtcgc attgcgctct aatgaagaaa ttgaggtcat
     1021 gtttaaagat ataaaactgc cggaaaaata attttttgcg ttattttcgg caccttttat
     1081 gtagcgaagg tgccggaata tattctct
//
LOCUS       DAPGWB010000366         1107 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.374, whole genome shotgun sequence.
ACCESSION   DAPGWB010000366 DAPGWB010000000
VERSION     DAPGWB010000366.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.374"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..228)
                     /locus_tag="RHX79_004801"
     CDS             complement(<1..228)
                     /locus_tag="RHX79_004801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001345526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDV2199853.1"
                     /translation="MVAVSQPTVDKIIFGAEATLINKIGTCWIASMDVLRKAVFEGVN
                     IIITHEPTFYSYADLEGDVLEFSWARKIMDYT"
     gene            complement(298..>1107)
                     /locus_tag="RHX79_004802"
     CDS             complement(298..>1107)
                     /locus_tag="RHX79_004802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001342239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV2199854.1"
                     /translation="YHVLQSFPMPQLASSREIRILLPASYYESDVSYPVLYMHDGQNL
                     FDKSVSFGPHVWDIPEAVDAFFPNSQYDGVIIVGIDNASSHGKFSRMDEYSPWPRNTS
                     FPLPGWDPDVDYSGGKGALYVDFIVNTLKNYIDSNFRTLPDRNNTAIAGSSMGAYISL
                     FAAILRLDVFSKVGVFSPALWFNDSAMLNFIQENNIFADLTVYLDVGTLETSGMREDF
                     PEVYISGAEKLCVSLRKQRNVTIDYHLWGGDTHSESAWAKRFPEMLKLFYC"
BASE COUNT          366 a          244 c          197 g          300 t
ORIGIN      
        1 cgtataatcc attatttttc tggcccatga aaactcaaga acgtcaccct ccagatcagc
       61 ataagaataa aatgtaggct catgagtaat aatgatattg acaccttcaa aaacagcctt
      121 tcttaaaaca tccattgagg caatccagca ggtcccaatt ttattaataa gtgtcgcctc
      181 agcaccaaaa ataattttat caacagttgg ttgcgaaacg gcaaccattg aatttaaaaa
      241 caattaagat ctgcggctgt tttaatatga tgcattcaac atccttcacc ggtttcatca
      301 gcaataaaat aatttcaaca tttctggaaa acgttttgcc catgcagact cagagtgggt
      361 atcacctccc catagatgat aatctatagt tacattgcgt tgtttacgga gactcacgca
      421 taatttttcc gcgcctgaaa tatagacttc aggaaagtct tcgcgcatac cactggtttc
      481 cagcgtaccg acatcgagat atacagtaag atctgcaaag atattgtttt cctgaataaa
      541 attcagcatt gcgctgtcat tgaaccatag tgccggcgaa aaaacgccaa cttttgaaaa
      601 aacgtctaga cgaagaattg cggcaaacaa actgatgtac gcacccatag aactacctgc
      661 tatcgctgta ttattacgat ctgggagagt tcgaaaattg ctgtcaatat agttcttgag
      721 cgtattcaca ataaaatcaa catacaacgc accttttcct ccactataat ccacatcagg
      781 gtcccagcca ggtaagggaa aagatgtgtt tcgcggccat ggagaatact catccatacg
      841 gctgaattta ccatgagacg atgcattatc aatccccaca atgataacac cgtcgtattg
      901 ggaatttggg aaaaaagcat ctaccgcctc aggtatatcc catacatgtg gaccaaaaga
      961 tacagattta tcaaataaat tttgcccatc gtgcatatac aatacagggt aactgacatc
     1021 agattcataa taggacgcag gtagtaatat tcttatttcg cgactacttg ccaattgtgg
     1081 catcggaaag gattgcaaca catgata
//
LOCUS       DAPGWB010000367         1101 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.375, whole genome shotgun sequence.
ACCESSION   DAPGWB010000367 DAPGWB010000000
VERSION     DAPGWB010000367.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.375"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..1016)
                     /locus_tag="RHX79_004803"
     CDS             complement(<1..1016)
                     /locus_tag="RHX79_004803"
                     /EC_number="4.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HDV2199855.1"
                     /translation="MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVN
                     MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCG
                     PVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYE
                     FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK
                     FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL
                     GREG"
BASE COUNT          269 a          288 c          284 g          260 t
ORIGIN      
        1 tagccttcac gaccgaggcg caggaattca tagtactgtg caattacctg acccgccggg
       61 cgggagaagt tgatggcaaa agtaccaatt tgaccaccca ggtagtcaac gttgaacacc
      121 agttcctgcg gcagcgcttc ttcgtcacgc cagataaccc agccgcagcc cagcggagcc
      181 agaccgaatt tatggcctga agcactgatc gatttcacac gcggcaggcg gaagtcccag
      241 acgatatccg gggcgacgaa cggtgccagg aagccaccgc tggcagcgtc gatgtgcatg
      301 tcgatgtcga taccagtgtc ggcctggaat ttatccagcg catcgtgcag cggttgtggg
      361 aactcatagt taccggtgta ggtcacgccg aaagtcggca ccacgccgat ggtgttttcg
      421 tcacaggctt caatcatgcg tttcgggtcc ataaacaact gaccggggcg catagggatc
      481 tcacgcagct ccacatccca gtagcgggcg aatttatgcc agcagatttg taccggaccg
      541 cacaccaggt ttggtttatc cgttggtttg cctgcagctt ccatacgctt gcgccaacgc
      601 catttcatcg ccatcccgcc aagcatacag gcctcggaag aaccaatggt gttggtgcca
      661 acggcctgac catttttcgg cgcaggcgca tgccacagat cggcaaccat atttacgcaa
      721 cgcaggtcga tggctgcgga ttgcggatat tcttctttgt cgatccagtt tttattgatc
      781 gacaaatcca tcaatttatg gacgttttcg tcgtcccagg tctggcagaa agtggccagg
      841 ttctgacgag cgttgccatc aagatataat tcatcattga taatctggaa tgcgacatca
      901 tcgcgcattt cgtgcagcgg aaatcgtttt gactccgcga tagtagaaat ggcctttgcg
      961 ccaaaacgtg aatcgagtag ttctgagcgg aaatccgtta acagcttctg gtccatttcg
     1021 aactccttaa atttatttga aggcaataaa aaagtaggat ttatccgcaa tggaagcaag
     1081 gcattacagg cttaatttaa a
//
LOCUS       DAPGWB010000368         1084 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.376, whole genome shotgun sequence.
ACCESSION   DAPGWB010000368 DAPGWB010000000
VERSION     DAPGWB010000368.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.376"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..1016)
                     /locus_tag="RHX79_004804"
     CDS             complement(<1..1016)
                     /locus_tag="RHX79_004804"
                     /EC_number="4.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HDV2199856.1"
                     /translation="MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVN
                     MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCG
                     PVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYE
                     FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK
                     FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL
                     GREG"
BASE COUNT          263 a          282 c          279 g          260 t
ORIGIN      
        1 tagccttcac gaccgaggcg caggaattca tagtactgtg caattacctg acccgccggg
       61 cgggagaagt tgatggcgaa agtaccaatt tgaccaccca ggtagtcaac gttgaacacc
      121 agttcctgcg gcagcgcttc ttcgtcacgc cagataaccc agccgcagcc cagcggagcc
      181 agaccgaatt tatggcctga agcactgatc gatttcacac gcggcaggcg gaagtcccag
      241 acgatatccg gggcgacgaa cggtgccagg aagccaccgc tggcagcgtc gatgtgcatg
      301 tcgatgtcga taccggtatc ggcctggaat ttatccagcg catcgtgcag cggttgtggg
      361 aactcatagt taccagtgta ggtcacgccg aaagtcggca ccacgccgat ggtgttttcg
      421 tcacaggctt caatcatgcg tttcgggtcc ataaacaact gaccggggcg catagggatc
      481 tcacgcagct ccacatccca gtagcgggcg aatttatgcc agcagatttg taccggaccg
      541 cacaccaggt ttggtttatc cgttggtttg cctgcagctt ccatacgctt gcgccaacgc
      601 catttcatcg ccatcccgcc gagcatacag gcctcggaag aaccaatggt gttggtgcca
      661 acggcctgac catttttcgg cgcaggcgca tgccacagat cggcaaccat atttacgcaa
      721 cgcaggtcga tggctgcgga ttgcggatat tcttctttgt cgatccagtt tttgttaatg
      781 gataaatcca tcaatttgtg gacattttcg tcgtcccagg tctggcagaa agtggccagg
      841 ttctgacgag cgttgccatc aagatataat tcgtcattga taatctggaa tgcgacatcg
      901 tcgcgcattt cgtgcagcgg aaaacgtttt gattctgcga tagtggaaat agacttcgca
      961 ccaaaacgtg aatcgagtag ttccgacctt aaatccgtta cttgcttctt atccatttta
     1021 aactccttaa aatgattgga tcgcattaaa aaagtaggat ttatcgataa agtaagcaag
     1081 tgca
//
LOCUS       DAPGWB010000369         1042 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.377, whole genome shotgun sequence.
ACCESSION   DAPGWB010000369 DAPGWB010000000
VERSION     DAPGWB010000369.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.377"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            114..>1042
                     /gene="tdcA"
                     /locus_tag="RHX79_004805"
     CDS             114..>1042
                     /gene="tdcA"
                     /locus_tag="RHX79_004805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TdcA"
                     /protein_id="HDV2199857.1"
                     /translation="MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIIND
                     IEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFG
                     FPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKL
                     QDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNG
                     ISIENIVKTDSVVTIYNLVLSADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAV
                     WSKNYRIKKAASVLVELAKEYSSYNGCRRRQLI"
BASE COUNT          292 a          196 c          241 g          313 t
ORIGIN      
        1 gtaacgatac catggaaagt attgaaagtt aatttgtgag tggtcgcaca tatcctgttc
       61 atttcatttt gatacacttc atgccgtcaa tgaggtaatt aacgtaggtc gttatgagca
      121 ctattcttct tccgaaaacg cagcacctgg tagtctttca ggaagtcatt agaagtggct
      181 ctatcggctc ggctgcaaaa gaattagggt taactcaacc ggccgtcagt aaaatcatta
      241 acgatattga agattatttt ggtgtggaat tagtggtgcg gaaaaatacc ggtgtaacat
      301 taacacctgc cggtcaattg ttactctccc gttccgaatc cattacccgt gaaatgaaaa
      361 atatggttaa tgagataagc ggtatgtctt ctgaggcggt ggtggaagtc tcatttggtt
      421 ttccttcatt gattggtttt acttttatgt cagggatgat caacaagttc aaagaggtgt
      481 tcccgaaagc gcaggtttct atgtatgaag cgcaactgtc ttcgttctta ccggcaatcc
      541 gcgacggtcg actggatttt gcgattggta cgttaagtgc agaaatgaag cttcaggatt
      601 tacatgttga gccgctgttc gagtccgagt ttgtgctggt agccagtaag tcccgaacat
      661 gcaccggcac caccacgctg gagtcgttga agaacgaaca gtgggtgttg ccacaaacca
      721 atatggggta ctacagcgag cttcttacta cgttacaaag aaatggcatc agtattgaaa
      781 acatcgttaa aaccgactca gtcgtgacaa tttataatct tgttctcagt gctgatttct
      841 taactgtaat tccttgtgat atgacgtcac cttttggttc aaatcaattt attactattc
      901 cggttgaaga aacattacct gtggcacaat atgccgcggt atggtcgaaa aattatcgta
      961 ttaaaaaagc agcatcggtt ttggtggaat tagccaaaga gtattcatct tataatgggt
     1021 gtagacgaag gcaattaata ga
//
LOCUS       DAPGWB010000370         1028 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.378, whole genome shotgun sequence.
ACCESSION   DAPGWB010000370 DAPGWB010000000
VERSION     DAPGWB010000370.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.378"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(129..776)
                     /gene="ychE"
                     /locus_tag="RHX79_004806"
     CDS             complement(129..776)
                     /gene="ychE"
                     /locus_tag="RHX79_004806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YchE"
                     /protein_id="HDV2199858.1"
                     /translation="MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARN
                     KTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED
                     KQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALF
                     ALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN"
BASE COUNT          328 a          240 c          210 g          250 t
ORIGIN      
        1 tataactaac tgtaatttga gaagaatatt tttacctatt ccttttgctt ttgataactg
       61 cgcgggaaca aagtaaaaat aatgacgaag taaacggagc atggcagctc cgtttcattt
      121 gaaaggaatt aattaagcag gccggggaaa atccccttaa taccagtaac gataaattca
      181 atccccaatg ccatcagcaa tagccccata atacgcgtaa tcacgttgat gccggtctgg
      241 cgtaaaaccc gtaccagcca cggtgccatg cggaacaatc cccagcaaca taaagcgaac
      301 aatgcaatag ccacaaagaa accaaacaga tagctaatgc tgtgataacg cgtaccccag
      361 acgatggtag aactgatcgc ccctggcccc gccatcaacg gcaacgccaa tggcaccaca
      421 ccaatgcttt cacgtaccgc ggtttctgat ttttcttgct tgttctgttt atcctcgcca
      481 agcttgccgc tgatcatcga catcgctatc gtcaccacca ggatgccccc ggcgatacgg
      541 aacgaatcaa ttgatatacc aaaaagttgc agaatcgtgt cgccgagaaa aagcgagatc
      601 cacaagataa tggccacaga caggttggct gtaaggttag ttttgtttcg cgctgccgct
      661 gtctgataac tggtcatgct gataaagacg ggaataatcc ctaccgggtt gaccagcgca
      721 aataacccga tgaaaaattt gaagtaaacg ggaaaatcaa aaaaggtctg aatcacggtt
      781 agctccgaag caaaagccgg ataatgttag ccataaataa ggttgaaaag acgcgctgac
      841 aatacgcctt ttgacagcat ttttcacctc ctaactactt aaaattgcta tcattcgtta
      901 ttgttatcta gttgtgcaaa acatgctaat gtagccacca aatcatacta caatttatta
      961 actgttagct ataatggcga aaagcgatgc tgaaaggtgt cagctttgca aaaatttgat
     1021 ttggatca
//
LOCUS       DAPGWB010000371         1025 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.379, whole genome shotgun sequence.
ACCESSION   DAPGWB010000371 DAPGWB010000000
VERSION     DAPGWB010000371.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.379"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..211)
                     /locus_tag="RHX79_004807"
     CDS             complement(<1..211)
                     /locus_tag="RHX79_004807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199859.1"
                     /translation="MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAAN
                     DNKEFLTSLSNIMRYKIDAGLSESYT"
     gene            complement(918..>1025)
                     /locus_tag="RHX79_004808"
     CDS             complement(918..>1025)
                     /locus_tag="RHX79_004808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDV2199860.1"
                     /translation="WMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP"
BASE COUNT          297 a          221 c          176 g          331 t
ORIGIN      
        1 atgtatagga ttcggaaagt ccagcatcta ttttgtacct cattatatta gataaggatg
       61 tgagaaattc cttgttatca ttcgcagcca tatatgccag tccgagttca gcctctgcgg
      121 ccttacaggc aaaatagctt agtgaacacg cttttcgtcc ctctttagta ctggctgata
      181 ttagtgccca taatattgct ttgtctgcca aatctaactc tctctgaaat tgtcttgcag
      241 taactgcact cgcagaaata gagaaaaaaa tacaattgtt aataaccttg ccatattttt
      301 tagtccgtaa ctgttaatgt gctatctggc tctgaaaata ttaactcatt taatttttgc
      361 atgtcattag ataaaccagt tatacaaccc tcggaacaga atcgaggtcc taaagacgga
      421 ccaaaagcgt ttaaacaact atgtattgaa aatccattgc gattataagt tcctgtatta
      481 actgacggta ctaatcgtat gccgtcaggt tttctattgc ttgctcccgg gtcattaaca
      541 ttctaactcc ataggccttg aggtattggc catctattta taaatgtgta caacggggat
      601 tatttttaca ttgcatatta ttaccagaag cgactggaat actaagcaca tcataaaaat
      661 tatcatcaca tggtatatct gaaacacacg aaagcatacc taaagttata ctgtataaac
      721 aggtggctaa tcccaagggg atcgattcca gaaatcgggt tcaacggata ctgataaaaa
      781 ttccacctac cttccagccc aatcggagcc tgagtgttat accgcccctg ctgcggttaa
      841 tgttaccgat aatagttata gtacagccct gattcatcat catactactg ctgcggcagt
      901 ctgatgaact attgctttta cggattctcc ttattcttcc ttctatccat tcgctttagc
      961 tttttgagct cttgaagttt gctctttgca tcaatattac cgttatttac agcgaattcc
     1021 atcca
//
LOCUS       DAPGWB010000372         1018 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.380, whole genome shotgun sequence.
ACCESSION   DAPGWB010000372 DAPGWB010000000
VERSION     DAPGWB010000372.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.380"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..656)
                     /locus_tag="RHX79_004809"
     CDS             complement(<1..656)
                     /locus_tag="RHX79_004809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415890.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HDV2199861.1"
                     /translation="MAVKISGVLKDGAGKPVQNCTIQLKAKRNSTTVVVNTVASENPD
                     EAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEA
                     LRRFELMVEEVAHNASAVAQNTAAAKKSASDAGTSACEAATHATDAAGSARAASTSAG
                     QAASSAQSASSSAGTASTKATEALKSAAAAESSKSAAATSAGAAKTSETNAAASQKSA
                     A"
     gene            complement(721..>1018)
                     /locus_tag="RHX79_004810"
     CDS             complement(721..>1018)
                     /locus_tag="RHX79_004810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HDV2199862.1"
                     /translation="GPSVRVNEWFSAYAMAGVAYSRISTFSGDYLRVTDNKGKTHEVL
                     TGSDDGRRSNTSLAWGTGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF"
BASE COUNT          199 a          313 c          262 g          244 t
ORIGIN      
        1 gctgcagatt tttgtgacgc tgcagcattc gtttctgacg ttttcgccgc accggcactg
       61 gtggctgccg cgctttttga ggactctgca gcggcagcac tttttaatgc ttcagtggcc
      121 tttgttgatg ccgttcctgc gctggaagat gctgactgag cagatgatgc agcctgtccg
      181 gctgacgtgc tggcggcacg tgctgagcct gcggcatcgg ttgcatgggt tgccgcctca
      241 caggcagatg tgccggcatc gctggctgac ttctttgcgg cagccgtgtt ctgtgccact
      301 gcggacgcgt tatgcgccac ctcttccacc atcagttcaa agcggcgcag tgcctccgga
      361 cgggcatcat cctccgtcat ggcaccaaga aaatcattca gcgtacccgg ttgtgagtct
      421 tcatacacgg tgatggtccc ggcatgcgat ggcgggaagc cttccaccaa cagaataacg
      481 ctgtactgac cgtactcaac gtccatgctg taacgcccgg cttcatccgg attttctgag
      541 gccaccgtgt tcaccaccac cgtggtgctg ttacgttttg ctttcagctg gattgtgcag
      601 ttctgtaccg gtttacctgc accgtctttc agtacacctg aaatctttac tgccatattc
      661 accccacaaa aaagcccgcc tgaaccggcg ggctgtcata acactgtgtt acctggctaa
      721 tcagaactta taaccgacac ccacgatgaa accgtcagtg cgccagtcgc cactgccgga
      781 gccttcataa gcaatatcaa tggccacgga ttcggtcggg ttaaactgca cgccagtccc
      841 ccacgccaga gacgtgttgc tgcggcgacc gtcatcactt ccggtcagca cttcgtgcgt
      901 tttccccttg ttgtcagtta cgcggagata atccccggag aaagtagaaa tacggctgta
      961 agccacaccc gccatcgcat acgcgctgaa ccattcattc acgcgcacag acggcccc
//
LOCUS       DAPGWB010000373         1015 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.381, whole genome shotgun sequence.
ACCESSION   DAPGWB010000373 DAPGWB010000000
VERSION     DAPGWB010000373.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.381"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..656)
                     /locus_tag="RHX79_004811"
     CDS             complement(<1..656)
                     /locus_tag="RHX79_004811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415890.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HDV2199863.1"
                     /translation="MAVKISGVLKDGAGKPVQNCTIQLKAKRNSTTVVVNTVASENPD
                     EAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEA
                     LRRFELMVEEVARNASAVAQDTAAAKKSASDAGTSAREAATHATDATGSARAASTSAG
                     QAATSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSAGAAKTSETNAAASQQSA
                     A"
     gene            complement(721..>1015)
                     /locus_tag="RHX79_004812"
     CDS             complement(721..>1015)
                     /locus_tag="RHX79_004812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HDV2199864.1"
                     /translation="PSVRVNEWFSAYAMAGVAYSRISTFSGDYLRVTDNKGKTHEVLT
                     GSDDGRRSNTSLAWGAGVQFNPTESVAIDIVYEGSGSGDWRTDGFIVGVGYKF"
BASE COUNT          193 a          318 c          261 g          243 t
ORIGIN      
        1 gctgctgatt gttgtgatgc tgcggcattc gtttctgacg ttttcgccgc accggcactg
       61 gtggctgccg cgctttttga ggactctgca gcggcagcac tttttgatgc ttcagtagcc
      121 tttgttgatg ccgttcctgc gctggaagac gctgactgag ccgacgtcgc ggcctgcccg
      181 gctgatgtgc tggctgcacg tgctgagcct gtagcatcag tcgcatgggt tgccgcctca
      241 cgggctgatg tgccggcatc gctggctgac ttcttcgcgg ctgccgtgtc ctgtgccact
      301 gcggacgcgt tacgcgccac ctcttccacc atcagttcaa agcggcgcag tgcctccgga
      361 cgggcatcat cctccgtcat ggcaccgaga aaatcattca gcgtacccgg ttgtgagtct
      421 tcatacacgg tgatggtccc ggcatgcgat ggcgggaagc cttccaccaa cagaataacg
      481 ctgtactgac cgtactcaac gtccatgctg taacgccctg cttcatccgg attttcagat
      541 gccaccgtgt tcaccaccac cgtggtgctg ttacgttttg ctttcagctg gattgtgcag
      601 ttctgtaccg gtttacctgc accgtctttc agtacacctg aaatctttac tgccatattc
      661 accccacaaa aaagcccgcc tgaaccggcg ggctgtcata acactgtgtt acctggctaa
      721 tcagaactta taaccgacac ccacgatgaa accgtcagtg cgccagtcgc cactgccgga
      781 gccttcataa acaatatcaa tggccacgga ttcggtcggg ttaaactgca cgccagcccc
      841 ccacgccaga gacgtgttgc tgcggcgacc gtcatcactt ccggtcagca cttcgtgcgt
      901 tttccccttg ttgtcagtta cgcggagata atccccggag aaagtcgaaa tacggctgta
      961 agccacaccc gccatcgcat acgcgctgaa ccattcattc acgcgcacag acggc
//
LOCUS       DAPGWB010000374         1002 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.382, whole genome shotgun sequence.
ACCESSION   DAPGWB010000374 DAPGWB010000000
VERSION     DAPGWB010000374.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.382"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            42..359
                     /locus_tag="RHX79_004813"
                     /pseudo
     CDS             42..359
                     /locus_tag="RHX79_004813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000952428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          278 a          254 c          245 g          225 t
ORIGIN      
        1 agaacctcgc ttaggcctgt gtccatatta cgtgggtagg atcagatcac tataacttcc
       61 tgccacgggc atgccgtcca cgcagggcca gaacaaaagg taaggttgag cggatggtga
      121 aatacctcaa ggagaacttc ttcatccagt accgcaggtt cgacagcttc actcatgtta
      181 atcaacaact ggagcaatgg atagccgatg tggctgacga acgggaactt cgccagttca
      241 aagaaacgcc ggaacagcgc ttcgtgctgg agcaggaaca tctgcagccg ttaccggata
      301 cggatgtcga taccagttac tttgacatcc gccatgtgtc tagggacagc tatatcgagt
      361 aacgactcaa cctgcccgta agcggaacag caattcccag acggcatgcc tgataacggg
      421 cagcagcaaa atgatgtgaa ccaccttcat tcagccaata ccgctttcgc tgagtccacg
      481 gatattcagc aaatcgtatt cggtggagta tcaactccca gtaccgcata ttttctctga
      541 gatgttcttc aagagccgaa ctgggaagta ctggcgatgc caaaaaagtg aattgtcaac
      601 ttctgaatcg tgggggcccc tttggggttc cgattcagtg gttgacagca atacgtcgtc
      661 acattgtcca ctgggttctg aagcgtatgc ccggcgggtt tatcacaacg ggaggacgag
      721 gcaacggata tcaccgtgtt caaccagggc tttggcctgc tgaccggagg catggtgggt
      781 atgcagaata tgactggcta aacgccgtca cgttgcgctc agacgctgaa aaaataaaat
      841 cagtaccgct gccagcgcgc aatgctgtcc ccgtctcgtc ctcccgcttc atgtggaata
      901 actagctaga aaagcaatga taaaaactga gtcactcaca cgtaatttac tcagtcacaa
      961 caacatcatt aaccaatcat tatcaagttc acataaataa ga
//
LOCUS       DAPGWB010000375         1002 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.383, whole genome shotgun sequence.
ACCESSION   DAPGWB010000375 DAPGWB010000000
VERSION     DAPGWB010000375.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.383"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..865
                     /locus_tag="RHX79_004814"
     CDS             <1..865
                     /locus_tag="RHX79_004814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YjeJ family protein"
                     /protein_id="HDV2199865.1"
                     /translation="ISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELRDL
                     LIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNTLE
                     LTDNQGENLTFVLTLHDGNKCELVVNELQIEMLARAIIHAINNAEMRELALRITSLLD
                     FLPLYDVDCQENGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKTRE
                     ATPGKEVEAITRRMLDFSPRLKKLVGVPCQVYVRTVAANNAQPLTQDQCLRALHHLRV
                     QSTSKTAPQAK"
BASE COUNT          300 a          223 c          229 g          250 t
ORIGIN      
        1 cataagcatc aagggtgtta ataccggtgt tattcgcaag agtaataatt tcattgcatt
       61 ggcgctgaaa attaaagaac ctcgcaataa agaatcgttg ttctttatgt ctgtcatgga
      121 actgcgcgac ctgctgattg cgctggaaag tcgtctgcat caaaaacata aactggatgc
      181 tgctgcacgc cttcagtatg agcaagctcg cgataaagtc attaagaaaa tggcagaaaa
      241 catcccagaa attctggttg atgagcttaa aaatgccgat attaatcgtc gggttaacac
      301 gctggaactt accgataatc aaggcgaaaa tcttaccttc gtattaacgc tacatgacgg
      361 taacaaatgt gagttagtcg tcaatgagtt gcagattgaa atgctggcgc gagcaatcat
      421 tcatgcaatt aataatgcgg aaatgcgtga actggcatta cgtattacct cactgttaga
      481 tttcctgccg ttatatgacg ttgactgcca ggaaaatggc aatctggaat atgacaccta
      541 ttcccaaccg gaatggaaac ataacttgtt tgaccattat ctggcggtgc tttaccgctt
      601 taaagatgaa agtggcaaag aacaatttag cggcgcagtg gtgaaaacgc gtgaagcaac
      661 gccgggtaaa gaagtagagg cgatcactcg ccgaatgctt gatttcagcc cacgactgaa
      721 aaaactcgtg ggtgtgccat gtcaggtcta tgttcgcacc gtagcggcga ataacgccca
      781 accgctaacc caggatcaat gcttacgcgc gctgcatcac ttacgtgttc aatccaccag
      841 caaaactgca ccacaggcga aataatctca tctttgctaa tgcgaggctg gagccatcca
      901 gcctgaaatg actgataacg tgatcgttgg tcatgccgga tgcggcgtaa acgccttatc
      961 cggcctacaa attctcaagc attcaatcag ttgcaatgca tt
//
LOCUS       DAPGWB010000376          996 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.384, whole genome shotgun sequence.
ACCESSION   DAPGWB010000376 DAPGWB010000000
VERSION     DAPGWB010000376.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.384"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            87..872
                     /locus_tag="RHX79_004815"
     CDS             87..872
                     /locus_tag="RHX79_004815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HDV2199866.1"
                     /translation="MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTP
                     QQLTDKDLFGNETTLAVSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMR
                     KYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIV
                     YQDTLQTGKYDSALKSTVWSDYKNEKLTDAISLRYLVRFTLVDVATGEWATWSPVNYE
                     YKVLPPLPDKNEASTTDMTEQQIMQLKQKTYKAMVKDLVNRYQ"
BASE COUNT          329 a          193 c          214 g          260 t
ORIGIN      
        1 ttattattta agtggggtat ataattagag tccgttatca atgctaaata ttctaatcat
       61 tatgacaggc gagggagtgt ccaattatga attcaaaaaa gctttgttgc atatgtgtgt
      121 tattctcgct gcttgcagga tgtgcctctg aatcttctat tgatgaaaag aagaaaaaag
      181 ctcaagtcac acaaagtaat attaataaaa acactcccca gcaactgaca gacaaagatt
      241 tattcggtaa tgaaaccact ctggccgtat ccgaagagga tattcaagct gcgcttgatg
      301 gagatgagtt ccgcgttccc cttaattctc ctgtaatact tgttcaatcc ggcaaccgcg
      361 caccggaaac cattatgcag gaggagatgc gaaaatatta tactgtttcc acattctctg
      421 gtatcccgga caggcaaaag cctctgactt gtaacaaaaa caaagataaa aatgagaacg
      481 aggatgttgc cagtgctgag aatatgaact ggatgcaggc actgcgtttt gtggctgcaa
      541 aaggacatca gaaagcgatt attgtttacc aggatacatt gcagacagga aaatatgact
      601 ctgcgctgaa atcaacagta tggtccgact ataaaaatga aaaactcacc gacgctatct
      661 ccctgcgcta cctggtacgt ttcacgctgg tggatgtggc aacaggtgag tgggctacct
      721 ggtcgccggt gaattatgaa tataaagtgc ttccaccatt gcccgacaag aatgaagcca
      781 gtacgactga tatgacagag cagcaaatca tgcaacttaa gcaaaagacc tataaagcga
      841 tggtaaaaga tttggttaac cgctatcaat aataaattat atctgccgcc aggaatttct
      901 ggcggcaata atacaaaatt ctttgcataa gaaatttttc ttgacaaaga cagtgcaaga
      961 aaggacatgg aatccggagt taaaaactgt ttgttt
//
LOCUS       DAPGWB010000377          981 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.385, whole genome shotgun sequence.
ACCESSION   DAPGWB010000377 DAPGWB010000000
VERSION     DAPGWB010000377.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.385"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..511)
                     /gene="sctT"
                     /locus_tag="RHX79_004816"
     CDS             complement(<1..511)
                     /gene="sctT"
                     /locus_tag="RHX79_004816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000503299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     subunit SctT"
                     /protein_id="HDV2199867.1"
                     /translation="MGEAILYQLHSLLAATALGFCRLAPTFYLLPFFASGNIPTVVRH
                     PIIIVVSCALVQHYHYELLNLNEIDIALFAAREIIIGLFIACLLASPFWMFLAIGSFI
                     DNQRGATLSSTLDPATGVDTSELARLFNLFSAAVYLTKGGMNFILETLWQSYNLWPSG
                     NFNFPKLEPL"
     gene            complement(513..773)
                     /locus_tag="RHX79_004817"
     CDS             complement(513..773)
                     /locus_tag="RHX79_004817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscS/YscS/HrcS family type III secretion system
                     export apparatus protein"
                     /protein_id="HDV2199868.1"
                     /translation="MDDIVFAGNRALYLILVMSAGPIAVATFVGLLVGLFQTVTQLQE
                     QTLPFGVKLLCVSICFFLMSGWYGEKLYSFGIEMLNLAFARG"
     gene            complement(783..>981)
                     /locus_tag="RHX79_004818"
     CDS             complement(783..>981)
                     /locus_tag="RHX79_004818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EscR/YscR/HrcR family type III secretion system
                     export apparatus protein"
                     /protein_id="HDV2199869.1"
                     /translation="GFYIYLPFVVVDLVISSVLLTLGMMMMSPVTISTPIKLILFVAM
                     DGWTMLSKGLILQYFDLSINP"
BASE COUNT          348 a          216 c          165 g          252 t
ORIGIN      
        1 ataaaggctc taatttagga aaattaaaat tgcctgaagg ccataaatta taactttgcc
       61 aaagagtttc cagaataaag ttcattccac ctttagtaag ataaaccgca gcagagaaaa
      121 ggttaaataa tcttgctaat tccgaggtat cgacacctgt agccggatcc aaagtactac
      181 ttaatgttgc accgcgttgg ttatcgataa agctacctat agcaaggaac atccaaaacg
      241 gggatgctaa taagcatgca ataaacagcc ctatgataat ttctctggca gcgaacaaag
      301 caatatcgat ttcatttaag ttcaataatt catagtggta atgctgaact aatgcacatg
      361 ataccactat tattattggg tgacgaacta ctgttggtat attcccactg gcgaaaaatg
      421 gtaacaaata gaaagttggt gccaatcggc aaaaaccgag cgctgtagca gccagcagac
      481 tatgcaactg atagagtatc gcctccccca tgctatcctc tcgcgaatgc taaattcagc
      541 atttcgatac caaatgaata taatttttca ccataccacc cgctcattaa aaaaaagcaa
      601 atacttacgc acaataattt cacgccaaat ggcaacgtct gttcttgcaa ctgcgttacc
      661 gtttgaaaaa gccctaccaa taaaccaaca aatgtcgcaa ctgcaatagg tcctgcagac
      721 ataactaaaa tcagatacag cgccctattc cccgcaaaaa caatatcgtc catatttttt
      781 cctcagggat taatggatag gtcaaaatat tgtaaaatga gcccttttga taacattgtc
      841 caaccgtcca tcgcgacaaa caaaattaat tttatcggtg tagatatggt taccggactc
      901 atcatcatca tacctaacgt taacagaacg ctggatataa ccagatccac tacgacaaag
      961 ggtaaataga tataaaaacc t
//
LOCUS       DAPGWB010000378          981 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.386, whole genome shotgun sequence.
ACCESSION   DAPGWB010000378 DAPGWB010000000
VERSION     DAPGWB010000378.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.386"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(225..678)
                     /locus_tag="RHX79_004819"
                     /pseudo
     CDS             complement(225..678)
                     /locus_tag="RHX79_004819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015364430.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
BASE COUNT          296 a          222 c          189 g          274 t
ORIGIN      
        1 cttccaacta attaaaatca acttatttat caattggtta ttttggcgca tagcggtcat
       61 caagggaata tcgcgttgtc ataaggtgtc gaggctcgga ggttcaaatc ctctcatgca
      121 aaaaataaat aaaattaatg acggttggaa attattcaat acatacactc tcgaaagtgc
      181 atcagccaac cgcagcacgt cttgcatacg gcgtgtctgc agttttatat aatcctggct
      241 ggaaacctct tatacaaagt agatacacca atatcataga tgatcgccac cttctgacgc
      301 gggacttttg atgcaattaa tcgcccggcc tgcgcccatt gttctgatgt aagtttagga
      361 cgacgtccac caattcctcc ctgtgcgcga gcatcttcca gtccaacttt tgttcagtca
      421 tcaatcagtt cacgcttcat ttcaaccagg gctccatcac atggaaaaat aaaaaaaacc
      481 atcgatgttg acgtgtcaat gttacctgtc aggctacgga aatccccccc ttacccgcag
      541 ctactcggta agtataataa gatgtttcct gctccttcct aacctgtcca gtttccagac
      601 aattaaagta tcaccttata taagagactg cagagcgcac tttaacctag gtcgttctga
      661 aatagttgca gattcgatta atcaacgatt atactccccg gcactccaga ggatctggta
      721 aacataaagt cagagcttgg gtatactggc acacaaatgg cagatcttgc aggtgcagcc
      781 agtcatagcc agtggcgaaa atacacgagt ggttctgagc cccgcgccat gtcatcacat
      841 atcttgtttt tttattgcta ccaatctgac tttgagtact aatgagctag atagaattgt
      901 ttgtaaaata aaaaaaattg gaacagtgat tatataaaaa tgaagaaggt aaaatcaatt
      961 cactatttgc gaggtgtagc a
//
LOCUS       DAPGWB010000379          974 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.387, whole genome shotgun sequence.
ACCESSION   DAPGWB010000379 DAPGWB010000000
VERSION     DAPGWB010000379.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.387"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..824
                     /gene="gadX"
                     /locus_tag="RHX79_004820"
     CDS             <1..824
                     /gene="gadX"
                     /locus_tag="RHX79_004820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadX"
                     /protein_id="HDV2199870.1"
                     /translation="QSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVD
                     KCVENFVLVSRDTLSLFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQN
                     KNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTL
                     ARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYH
                     SVSYFIYVFRNYYGMTPTEYQERSAQGLPNRDSAASIVAQGNFYGTDRSAEGIRL"
BASE COUNT          285 a          183 c          217 g          289 t
ORIGIN      
        1 tgcaatcatt acatgggaat tgtctaattg cgtacgcaag acataaatat attctcacca
       61 tggttaatgg tgaatatcgc tattttaatg gcggtgacct ggtttttgcg gatgcaagcc
      121 aaattcgagt agataagtgt gttgaaaatt ttgtattagt atcaagggat acgctttcat
      181 tatttctgcc gatgctcaag gaggaggcat taaatcttca tgcacataaa aaaatttctt
      241 cattactcgt tcatcactgt agcagagata ttcctgtttt tcaggaagtt gcgcaactat
      301 cgcagaataa gaatcttcgc tatgcagaaa tgctacgtaa aagagcatta atctttgcgt
      361 tgttatctgt ttttcttgag gatgagcact ttataccgct gcttttgaac gttttgcaac
      421 cgaacatgcg aacacgagtt tgtacggtta tcaataataa tatcgcccat gagtggacac
      481 tagctcgaat cgccagcgag ctgttgatga gtccaagcct gttaaagaaa aaattgcgcg
      541 aagaagagac atcatattca cagttgctta ctgagtgtag aatgcaacgt gctttgcaac
      601 ttattgttat acatggcttt tcaattaagc gagtcgcagt gtcctgtgga tatcacagcg
      661 tgtcgtattt catttacgtc tttcgaaatt attatgggat gacgcccaca gagtatcagg
      721 agcgatcggc gcagggattg ccgaaccgtg actcggcggc aagtattgtt gcgcaaggaa
      781 atttttacgg cactgaccgt tctgcggaag gaataagatt atagaatttt actcagacat
      841 aaaaaaaacc cggcataggg gaccgggaag aggatagtct gccgtctcca gactaataaa
      901 ccgttataac actccctgtt ggcacgggaa actttgtgct ctcagtaagt taaatataac
      961 ttttactgga aata
//
LOCUS       DAPGWB010000380          937 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.388, whole genome shotgun sequence.
ACCESSION   DAPGWB010000380 DAPGWB010000000
VERSION     DAPGWB010000380.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.388"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            262..468
                     /locus_tag="RHX79_004821"
     CDS             262..468
                     /locus_tag="RHX79_004821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199871.1"
                     /translation="MHKDQYTDAPSQEQVRVKTMLNSTISMGYPDVVIACIEHQVSLE
                     AFRAIEAALVKHDKNTKDYSLVVD"
BASE COUNT          256 a          194 c          208 g          279 t
ORIGIN      
        1 atgctattca acaatacaaa ttacccataa acctcgtttt tacggggttt tgttatattt
       61 aaacattacc gaatagatat aaatctcgat tgtcgatggt attggttgtg tgacaatacc
      121 tagtctttcc ggtatgcctg aagagaatac aaacgacaga ttatgtaagg gaaacgcgct
      181 gaaactttca ctctttcatg ctgagtgatt tgacgttata tttttagccg caagtgaaga
      241 gcaaacgaat ggagcgacaa aatgcataaa gatcaataca ctgatgcccc ctcccaggag
      301 caggttcgtg taaaaactat gcttaatagc accatttcga tgggttaccc ggatgttgta
      361 attgcatgta tagaacatca agtatctctg gaagcattca gggcaattga ggccgcgtta
      421 gtaaagcacg ataagaatac gaaggattat tccctggtgg ttgactgatc accataactg
      481 ctaaccattc tgaccatttc acaagtgaca gagtcaatat cgtattctgt cactgtaagg
      541 ctaatacagt actgcaattc aactacagca atgcctcgta tttaggtgaa tttacaatat
      601 cgtccagttc ggatgcaggc tgcatttctg aagataaggc atttcggttc gcgtattttc
      661 ccctcatgct cgtcagtcct gcgcgtagta agaaacagga cactcacact aatttgtgtg
      721 ggcatgctgt gatgtccttc tgaattatcc ccatgccatt atgtaaagct ctgtttcaga
      781 tgctcgtcac ggttgtcagg ctgtcgggtc ctcccagtgg gggtccctgc cacggggcgg
      841 gagcgtcgcg gaaaaaggct agtttttgca tttccatggc ggcggcagca tgtttggtaa
      901 tttattgata attaaaagtt atttctcttt ttacctg
//
LOCUS       DAPGWB010000381          927 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.389, whole genome shotgun sequence.
ACCESSION   DAPGWB010000381 DAPGWB010000000
VERSION     DAPGWB010000381.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.389"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            263..>927
                     /locus_tag="RHX79_004822"
     CDS             263..>927
                     /locus_tag="RHX79_004822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004019902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199872.1"
                     /translation="MALYNIANKELHALEKTTFTLEGLQERYDLQEAIKKNIDIIAPD
                     CLVISEEFSDWEDSRRRIDLLAIDKQANLVVIELKRDETGAHMELQALRYAAMISTMS
                     FAKACEYFQTYLKKQNCDADAKEKILEFVELDETELVDFGKDIRIVLASSDFSKELTT
                     TAIWLRDKGVDIRCVRLTPYRFNDDVLINAEQIIPVPELEEYQVKFREKRDEQLISSQ
                     KKE"
BASE COUNT          297 a          156 c          209 g          265 t
ORIGIN      
        1 tcgagtcgct caagggcggc tttttttgtg tctgaaatta cccatatccg tgcagtatat
       61 cggcctgtca gaaaggccgt tcagtgttct tcgtttcgta gccggtggcc tcaagtatgc
      121 cctggccgtt tctgttagtg cgactagaaa tgaccctata tcattcccat tgactgcatc
      181 agcttaatcg attacagctc aggaaataaa attttaactg tgttaaaatc cctgtaaaat
      241 tagttaaaaa aggaagataa acgtggcgct gtacaatatc gcaaataaag aactacatgc
      301 tttagaaaaa acgaccttta ctctggaagg attacaggaa cgttatgatt tacaggaagc
      361 aatcaaaaaa aacatagata ttattgctcc tgattgcctg gtaatttccg aagagttttc
      421 tgactgggaa gatagtcgtc ggcgaattga tttattggca atcgataaac aggcaaattt
      481 agtggttatc gaattaaaac gtgatgaaac gggtgcgcat atggagttac aggcactacg
      541 atatgcggcg atgatttcca caatgagttt tgcgaaagca tgtgaatatt tccagacgta
      601 tttgaaaaaa caaaactgcg atgccgatgc gaaagaaaaa atacttgaat ttgttgagct
      661 ggatgaaact gagcttgttg atttcggaaa agatatcaga attgttttgg cttcatcgga
      721 ttttagcaag gaactgacta ccactgcgat ttggttaaga gataaggggg tagacattcg
      781 atgcgttcgt ctgacgcctt atagatttaa tgatgatgtt cttatcaatg cagagcaaat
      841 cataccggtt cctgaattgg aagaatatca agttaaattt cgtgaaaaac gtgatgagca
      901 gctaattagc agtcagaaaa aagagaa
//
LOCUS       DAPGWB010000382          920 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.390, whole genome shotgun sequence.
ACCESSION   DAPGWB010000382 DAPGWB010000000
VERSION     DAPGWB010000382.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.390"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            47..808
                     /gene="ydeO"
                     /locus_tag="RHX79_004823"
     CDS             47..808
                     /gene="ydeO"
                     /locus_tag="RHX79_004823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response transcriptional regulator
                     YdeO"
                     /protein_id="HDV2199873.1"
                     /translation="MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPY
                     ERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERN
                     HHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCL
                     YISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYA
                     FRKHFGNSPKRVSKEYRCQSHTGMNTGNTMSALAI"
BASE COUNT          283 a          175 c          182 g          280 t
ORIGIN      
        1 tgttaaaaaa gtatcgataa aaactttatt gttttaagga gataaaatgt cgctcgtttg
       61 ttctgttata tttattcatc atgccttcaa cgctaacatt ttagataaag attacgcctt
      121 ctctgacggc gagatcctga tggtagataa cgctgttcgt acgcattttg aaccttatga
      181 gcggcatttt aaagagatcg gatttactga aaataccatt aaaaaatatc tacaatgcac
      241 taacatccag acagtgacgg tgcctgttcc tgcgaagttt ttacgtgctt caaatgtacc
      301 gactggattg cttaatgaaa tgattgctta tctcaactcg gaagaacgca atcatcataa
      361 tttttcagaa cttttgcttt tttcttgcct gtctattttt gccgcatgca aaggtttcat
      421 tacactatta actaacggtg tgctatccgt ttccggaaaa gtgagaaata ttgtcaacat
      481 gaagctggcg cacccatgga agctgaaaga tatttgtgac tgcctgtaca tcagtgaaag
      541 cctgttgaag aaaaaactaa agcaagagca aacgacattc tcacagattc tattagatgc
      601 cagaatgcag cacgcaaaaa atttgatacg cgtagaaggt tcagtcaata aaattgccga
      661 acaatgtggt tatgccagta catcttattt tatttatgcg ttccgcaaac atttcggcaa
      721 cagtccgaag agagtttcta aggagtaccg ttgtcaaagt cacacgggta tgaatacggg
      781 caacacgatg agtgctttag ctatttgatt atttgctaac gagtagtcaa ccacgcacgc
      841 tacgtaagaa ttatatgggg cagccattcc ctgccccgcg ttgtttttag gcgatatatt
      901 tattgaaata aataagtgac
//
LOCUS       DAPGWB010000383          900 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.391, whole genome shotgun sequence.
ACCESSION   DAPGWB010000383 DAPGWB010000000
VERSION     DAPGWB010000383.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.391"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            177..395
                     /locus_tag="RHX79_004824"
     CDS             177..395
                     /locus_tag="RHX79_004824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000556745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199874.1"
                     /translation="MHTFIFLVLIKNINGGGSWNITPMPNTDVCVQVLRTIEAHGGRG
                     FGNTGECIEVKTNEPLNSVMETLNGGGQ"
     gene            423..770
                     /locus_tag="RHX79_004825"
     CDS             423..770
                     /locus_tag="RHX79_004825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000836682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199875.1"
                     /translation="MKSIYLKSVLAFIFVGVMAMIVCIPFYIVYLAQQPATPEQLTEI
                     LQETPCAAEAFQETLNYQSEPLTLGKANKIASECRKRNEMAEVKRVRENERNKIREKQ
                     IQALNDAHSVKER"
BASE COUNT          295 a          156 c          206 g          243 t
ORIGIN      
        1 ctggcaggag aaagtggatg caatgcagga gtctgccacc cgtcagcgtg aacaggatac
       61 tattcggaag tttactgaag ggaataaatc cgaatgagaa tctgcagtgt tttatgacct
      121 cataagttaa ctgaagggat attcagtgat taatatacaa gcggagataa taaagaatgc
      181 atacctttat ttttcttgtg ctgataaaaa atattaacgg tggcggaagc tggaatatta
      241 cacccatgcc aaatacggac gtatgcgtgc aggttcttcg gacaatcgaa gcacatggcg
      301 gcaggggctt tggaaataca ggggagtgta ttgaagttaa aacaaatgaa cctttgaaca
      361 gcgtgatgga aacactaaat ggtggtgggc aatgagtgct tactgcttcg aaggaaaatg
      421 aaatgaagtc gatatattta aaatctgttc tggcttttat atttgttggc gttatggcta
      481 tgattgtatg tattcctttt tacatcgttt accttgcgca acaacctgca acaccagaac
      541 aactgacaga gattttacag gaaactccct gtgcagcaga agcatttcag gagacactta
      601 attatcagtc tgaaccttta acacttggta aggcaaataa aatcgcatca gaatgcagaa
      661 aaagaaacga aatggcagag gtgaaacgtg taagagaaaa tgagcgcaat aagattcgcg
      721 aaaaacaaat tcaggcatta aatgatgctc attcagtaaa ggaacgttaa tcctggtttc
      781 ctgttaaaag cctccatctc ttatttgtgc tgtggtttca ggaatggcac tgcgtgatat
      841 atccacggcc acagactgat attttccttt tttaaacgca ctaaggaata ctcatatgag
//
LOCUS       DAPGWB010000384          898 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.392, whole genome shotgun sequence.
ACCESSION   DAPGWB010000384 DAPGWB010000000
VERSION     DAPGWB010000384.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.392"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            3..752
                     /gene="cdtA"
                     /locus_tag="RHX79_004826"
     CDS             3..752
                     /gene="cdtA"
                     /locus_tag="RHX79_004826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin type III subunit
                     CdtA"
                     /protein_id="HDV2199876.1"
                     /translation="MVGILIPILLNGCSSRKNRAHLDPKVFPPQVEGGPTIPSPDETG
                     LPLPGAGPALPTNAPIPIPVPGTAPAVSLMNMDGSVLTMWSRGAGSSLWAYYISDSNS
                     FGELRNWQIMPGTRPNTIQFRNVDVGTCMTSFPGFKGGVQLSTAPCQFGPDRFDFQPM
                     VTRNGNYQLKSLSTGLCIRANFLERTPSSPYATTLTMERCPSSGERNFEFMWSISEPL
                     RPALATIVKPEIRPFPPLPIEPDRHSAGGEQ"
     gene            749..>898
                     /locus_tag="RHX79_004827"
     CDS             749..>898
                     /locus_tag="RHX79_004827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000759934.1"
                     /note="Cdt from Campylobacter forms the A subunit (CdtB)
                     that is delivered into host cells by the heterologous B
                     subnit (CdtA/C); in Salmonella, CdtB alone is encoded;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit B family
                     protein"
                     /protein_id="HDV2199877.1"
                     /translation="MKKYIISLIVFLSFYAQADLTDFRVATWNLQGASATTESKWNIN
                     VRQLIS"
BASE COUNT          265 a          212 c          183 g          238 t
ORIGIN      
        1 tgatagtagg cattcttatt ccaattctat taaatggttg ttcgtcaaga aaaaatagag
       61 ctcatcttga ccccaaagtt ttccctcctc aagtagaggg aggaccaaca attccttctc
      121 cagatgagac tggacttcca ttacccgggg ctggaccagc acttcccaca aatgcaccaa
      181 tccctatccc ggtaccaggt acagcacccg cagtatcttt gatgaacatg gatggctcag
      241 ttctaacaat gtggagccgc ggagctggtt catcattatg ggcttattat atcagcgact
      301 ccaattcatt tggagaacta cgcaattggc agattatgcc cggaaccaga ccaaatacga
      361 tacagttccg caatgtagac gttggtactt gtatgacaag cttcccgggg tttaaaggag
      421 gtgtgcaact atctactgca ccttgccagt ttggaccaga tcgcttcgac ttccagccga
      481 tggtaacacg caatggtaat taccagttaa aatcgttgtc tacaggttta tgcatcagag
      541 ctaatttttt agaaagaaca ccatcatctc cgtacgcaac aacattaaca atggagcgtt
      601 gcccatcaag tggagagaga aacttcgaat ttatgtggtc cataagcgaa ccattaaggc
      661 cagctctagc cactattgtt aagccagaaa tacgcccatt tccaccacta ccaatagaac
      721 cagataggca ttcagcagga ggcgaacaat gaaaaaatat attatatctc tgatagtatt
      781 tttatcgttt tacgctcagg cggatttaac tgattttcgc gttgcgacct ggaaccttca
      841 gggcgcatcc gccactactg aaagtaaatg gaatataaat gtccgacaat taatttct
//
LOCUS       DAPGWB010000385          878 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.393, whole genome shotgun sequence.
ACCESSION   DAPGWB010000385 DAPGWB010000000
VERSION     DAPGWB010000385.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.393"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..492)
                     /locus_tag="RHX79_004828"
     CDS             complement(<1..492)
                     /locus_tag="RHX79_004828"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199878.1"
                     /translation="MTSFAYDGDILTPNNLEITSFATLKSKIRERRVCVFLGAGFSKA
                     WDDKYPLSNEVFSISEDEALENIDEYGFFSLFDSLKFKWADANAGLDDKANVFKSFKY
                     ALDVYKRYPSLLPSYLDRHTLELFEAQVKLYVKNKFAKKIPANDLKLSQTAKFGQNKR
                     NIIS"
     gene            complement(506..>878)
                     /locus_tag="RHX79_004829"
     CDS             complement(506..>878)
                     /locus_tag="RHX79_004829"
                     /inference="COORDINATES: protein motif:HMM:NF024700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV2199879.1"
                     /translation="SQGTLNVLTFLAILIWASEYDFTLYVDEIDSSIHYSLASALIKK
                     IFDKTCRKNGVQFIMSTHNIPLLDDVFRRDELNIIVKDSSKASIITNATVFSVRKDAK
                     VSAKYLRGEFGLVPAFLDIKN"
BASE COUNT          295 a          165 c          119 g          299 t
ORIGIN      
        1 agaaataata ttccttttat tctgcccaaa ttttgcagtt tgacttagct ttaaatcatt
       61 tgccggtatt ttttttgcaa acttattttt tacatatagt tttacttgtg cctcaaacaa
      121 ctcaagcgta tgcctatcaa gatacgacgg caataaactt ggatatcgct tataaacatc
      181 caatgcatat ttaaaactct tgaaaacatt agctttgtca tctaaacctg cattagcatc
      241 cgcccattta aatttaagac tgtcgaacaa agaaaaaaaa ccatactcat caatattttc
      301 taatgcttcg tcttcagaga tggaaaagac ttcattactc aatgggtatt tgtcatccca
      361 ggctttagaa aatcctgctc cgagaaaaac acatactctt cgctctctta tttttgattt
      421 caatgtggcg aaggatgtaa tttctaaatt attaggtgtc aaaatatcac catcataagc
      481 aaagctagtc atgtttttct cacgcttagt tttttatatc aagaaaagct ggaactaatc
      541 caaattcgcc acgtaaatat ttggcagaca ctttagcatc tttccttaca gaaaataccg
      601 tagcattagt tattatcgac gctttagatg aatccttgac tataatatta agctcatctc
      661 ttctaaacac atcatctaat aaaggaatat tatgtgtaga cataataaac tgcacaccat
      721 ttttacggca ggttttatca aatatttttt tgattagtgc acttgccaaa gaatagtgaa
      781 tagatgaatc tatttcatcc acataaagtg taaaatcata ttcactagcc caaatcaata
      841 ttgctaaaaa tgttaaaaca tttagtgtgc cttgggaa
//
LOCUS       DAPGWB010000386          862 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.394, whole genome shotgun sequence.
ACCESSION   DAPGWB010000386 DAPGWB010000000
VERSION     DAPGWB010000386.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.394"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..394)
                     /locus_tag="RHX79_004830"
     CDS             complement(<1..394)
                     /locus_tag="RHX79_004830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDV2199880.1"
                     /translation="MKRLQAFKFQLRPGDQQECEMRRFAGACRFVFNRALALQNENHE
                     AGNKYIPYGKMASWLVEWKNATETQWLKDSPSQPLQQSLKDLERAYKNFFRKRAAFPR
                     FKKRGQNDAFRYPQGVKLDQENSRIFLPK"
     gene            402..>862
                     /gene="tnpA"
                     /locus_tag="RHX79_004831"
     CDS             402..>862
                     /gene="tnpA"
                     /locus_tag="RHX79_004831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HDV2199881.1"
                     /translation="MILWSVKKETDIRRGRHCVFLMHVHLVFVTRYRRQIFDHDATEK
                     LRAYFSNVCADFEAELVEMDGEPDHVHLLINYPPKLAISSLVNSLKGVSGRLLRRDRP
                     DIAVRYYYKGVLWSPGYFASSCGGAPISVIRQYIEQQQTPGQVENRALYPCP"
BASE COUNT          218 a          206 c          202 g          236 t
ORIGIN      
        1 gtttcggcag aaaaatacgg ctgttttcct gatcgagctt tacgccctgc gggtagcgga
       61 atgcatcatt ctgtccccgc tttttgaatc ggggaaaagc agcccgcttc cggaagaagt
      121 ttttgtaagc ccgctcaagg tctttcagtg actgttgcaa tggctgtgag ggagaatctt
      181 taagccattg cgtttcagtg gcatttttcc actcaaccag ccaggaagcc attttcccgt
      241 aagggatgta tttattaccg gcctcatgat tctcattctg aagcgccaga gcacgattga
      301 aaacgaaacg acatgcgcct gcgaagcgcc tcatttcaca ctcctgttga tcacctggtc
      361 ttaactggaa tttaaatgcc tgtagtcgtt tcacaggcca aatgatactt tggtctgtga
      421 aaaaagaaac cgatatccgg cgtggaaggc attgtgtttt cctgatgcat gttcacctgg
      481 tctttgtcac cagatacaga cgtcagattt ttgaccatga cgcgacagaa aaactacgcg
      541 cttacttttc aaatgtatgt gctgattttg aagctgaact tgttgaaatg gatggcgaac
      601 cagatcacgt ccatttgtta attaactatc ctcccaaact ggcgatatcc agtctggtaa
      661 acagcctcaa aggcgtatcg ggtaggttac tgcgacgaga tcgaccagat attgcagtca
      721 ggtattacta caaaggcgtt ttgtggagtc ctggctattt tgccagtagc tgcggaggtg
      781 cgccaatatc cgtcatccgc caatacattg aacaacagca aacacctggt caggtggaaa
      841 accgcgcctt atatccctgc cc
//
LOCUS       DAPGWB010000387          857 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.395, whole genome shotgun sequence.
ACCESSION   DAPGWB010000387 DAPGWB010000000
VERSION     DAPGWB010000387.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.395"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            36..668
                     /locus_tag="RHX79_004832"
     CDS             36..668
                     /locus_tag="RHX79_004832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417323.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2199882.1"
                     /translation="MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEES
                     SYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVLVSDR
                     NMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIM
                     GYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGGKINELFIRSHSVQH"
BASE COUNT          279 a          146 c          166 g          266 t
ORIGIN      
        1 ttatgcaatt atatacggat agggaggttc ttaacatggg gctttgtagt cgttataaaa
       61 gtcttacatg caatagttgc tcaatgcatt gccaaataat gccagaagag tcaccgcgtt
      121 tgcagtactg cgcaaactcg tgtttttgta tgtggcccga agaaagttca tattttaatc
      181 gtggtgtggt agaaggtatc ttaacaaaaa accacaatgc gagattaagc ggatatattt
      241 ttgtcgattt ttcagtaagt tttttacgtc tattccttga aaaagactgg attgactatc
      301 ttgcaagtac tgacatgggg attgttttag tcagcgaccg caatatgcaa tcgttagcta
      361 attactggcg aaaacacaac tcagcaatat ctgctgtcat atataatgat gatggtcttg
      421 atgttgccaa tgaaaagatc agacaactat ttattggtcg ttatttatca tttaccagag
      481 gtaacacatt aactcagatg gaattcacca taatggggta tatggtttct ggttataatc
      541 catatcagat tgctgaagtt ctggatatgg atatccgtag catctacgcg tacaagcaac
      601 gaatcgaaaa gagaatgggt ggtaaaataa acgaattatt tattcgttca cattcggtcc
      661 aacattgata ctcaacgacc agccagaatc atactctgtt tatacgggca tttattgaaa
      721 tgtccgtatt ttataaatag gccgtcccct caagagtaaa caccatagta tttaaaacca
      781 tcacacgaaa aattcagaag cattacgaaa tatgaattta caaacaatag tggcataaat
      841 gttaaccatg ttaattt
//
LOCUS       DAPGWB010000388          855 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.396, whole genome shotgun sequence.
ACCESSION   DAPGWB010000388 DAPGWB010000000
VERSION     DAPGWB010000388.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.396"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..534)
                     /locus_tag="RHX79_004833"
     CDS             complement(<1..534)
                     /locus_tag="RHX79_004833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417590.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199883.1"
                     /translation="MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTN
                     DVNKIYSISNELRRVLSAITALNFYQGDVPSVMIRIQPENMSPFIIDISTGEHDDYII
                     QTLDVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTRKEAILTPLVHFNKTSIT
                     SDCWQILFFSPDHFNNDF"
     gene            complement(790..>855)
                     /locus_tag="RHX79_004834"
     CDS             complement(790..>855)
                     /locus_tag="RHX79_004834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TdcR"
                     /protein_id="HDV2199884.1"
                     /translation="LINVNFFSSDRTSFCECNRFP"
BASE COUNT          259 a          159 c          166 g          271 t
ORIGIN      
        1 aaaatcatta ttaaaatgat cgggtgaaaa aaagagaatt tgccaacaat ctgaagtaat
       61 gctggtttta ttaaagtgca caaggggtgt taagatggct tcttttcggg tgaattttgc
      121 acaatactta gaaatcgtct ccttaataca ttccagctct tttttattga cggctgagca
      181 agtacattgt tcgccaaaag gtgcaaaagt gcctacatct aatgtttgta tgatataatc
      241 atcatgttcc cctgtagaaa tatctatgat gaatggactc atattttccg gttggattcg
      301 gatcattaca gaaggaacat cgccttgata gaaattcaat gcagtaattg cagataatac
      361 tctccgcagt tcattactta tactgtaaat tttattaacg tcattggtgg agacaatttc
      421 tgcaaacttt ctttttaccg tccaataatc aatatttcta ttgtgattgt taaccactgc
      481 gtgcattggc gggattgaag ggtgaaaaat atgtgcaatt gggaagcctt tcattgatgc
      541 ctgccttgtc gtcatgacaa acaataatag atgcttattt tcctcgcagg gttctttcgc
      601 actatcaaaa aacgctcatt tacccggcgt tacagtaaac gaagcaacat tctgtggcct
      661 acgacgatca aaagctctgt gaaaatttcc cttgttgtct ttgtctgacc ttatcgcggc
      721 gaccagcaat tattcgtttt gtgatcctca acacaaaatg ctattcgtcg cctatgaggg
      781 gagaagaatt tatggaaaac gattgcattc acaaaatgac gtcctgtcag aagagaaaaa
      841 gttgacgtta atcaa
//
LOCUS       DAPGWB010000389          851 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.397, whole genome shotgun sequence.
ACCESSION   DAPGWB010000389 DAPGWB010000000
VERSION     DAPGWB010000389.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.397"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(22..693)
                     /gene="queE"
                     /locus_tag="RHX79_004835"
     CDS             complement(22..693)
                     /gene="queE"
                     /locus_tag="RHX79_004835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDV2199885.1"
                     /translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
                     EKLEDREVSLFSILAKTKESDKWGSASSEDLLAVIGRQGYTARHVVITGGEPCIHDLL
                     PLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKH
                     PVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHK
                     YLNIA"
BASE COUNT          221 a          211 c          191 g          228 t
ORIGIN      
        1 ataacgctta taaatgttta atcaggcaat atttagatat ttatgtgttt gcatcgacaa
       61 acgccaatta cgcgcaatgc aggtttcaat gcacaaacgt gtggcatcat ccttttggct
      121 aatcggctgc agtgcaatga ctcgcggttt atcatcggtc agcgttgcca atagttcatc
      181 cagtgcttca atatcgcgta cgcgccccac tggatgcttg atttcgttgg ctcgctccag
      241 tgcctgtgac aacacgtcat agccgccgcg catgttcagc tttggcgata cggtaaccca
      301 ggtattcggt gtgcagcgta cctcatgagt accactggtt tcgatctggc agctaaaacc
      361 gttcttttcg agcagatcag tcagtggtag caaatcatga atgcaaggct caccacccgt
      421 aatcaccaca tgccgcgcgg tgtatccctg gcgaccaatg acagccagca aatcttcact
      481 gctcgccgac ccccacttat cactctcttt ggtcttcgcc agaatgctga aaagggagac
      541 ttcccgatcc tcaagctttt cccaggtgtg tttggtgtcg caccaggcac agccaaccgg
      601 gcatccctgt aaacgaataa aaatggcggg aacgccggta aagtaaccct caccttgcag
      661 ggtctggaac atctcgttaa tcgggtactg catagcattc tctgtgaagt ggataattgt
      721 taattattgc agatcctgcc gcaacaatca tgtcttatta acattctgtt acaggcaggt
      781 ttaaggcaaa aagtgcatta gatcataaag aataaaatga tgcgacgtat tatgttttaa
      841 ggaattaatg a
//
LOCUS       DAPGWB010000390          846 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.398, whole genome shotgun sequence.
ACCESSION   DAPGWB010000390 DAPGWB010000000
VERSION     DAPGWB010000390.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.398"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            284..490
                     /locus_tag="RHX79_004836"
     CDS             284..490
                     /locus_tag="RHX79_004836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000547968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDV2199886.1"
                     /translation="MHIPQKFLPKSRQKLLRSAPGQSFPAVAVMPLAAKVLKQVMVNT
                     GGNKRQVPAKRQNRGSRNSTDDGG"
     gene            515..802
                     /locus_tag="RHX79_004837"
     CDS             515..802
                     /locus_tag="RHX79_004837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001825190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199887.1"
                     /translation="MSTRNIHVNTASYTLLVAGKKKNTGEEWDVLEFSSLTELKKYRK
                     SHPEKMAFSYSYALSRGVDTQFRHINIAEADHFKQFLRQIKRAGLDIRAIC"
BASE COUNT          202 a          245 c          236 g          163 t
ORIGIN      
        1 agtctccgcc aaacccgctg gcgcggtttc gggctgtcgc tacggtccga tgcgtgaaaa
       61 ccccgggctt gcagcgaccg ttccggtcgc gccgtggcct gcgctcctta catcccggca
      121 aaagaccgcc gggatgtaag gggcaactcc gtttcgcaaa ccgcgcttca cgtcgttgcg
      181 gcgggtccct gcccgttgtt gtgtccggtg ccattcacct gtttaagccc ctgtcgccgg
      241 gggcaaagac agccacaacc gtctccgcca gtccaggggt gaaatgcaca tcccgcaaaa
      301 gtttttgccc aaaagcaggc aaaaactttt gcggtctgcc cccggacagt cgtttccggc
      361 cgtggcagtg atgccccttg cggcgaaggt tctcaaacag gtgatggtga ataccggagg
      421 gaacaaaagg caggtccccg caaaacgtca aaaccgcggc tcccgaaact caacagatga
      481 tgggggctga aaaccagaga gaggagaaag caggatgagt acccgaaata tccacgttaa
      541 caccgcgtcg tacacgcttc ttgttgccgg gaagaaaaaa aacaccgggg aagagtggga
      601 cgtcctggaa ttcagcagcc tgactgagct gaaaaaatat cgcaaaagcc acccggaaaa
      661 gatggccttc agctatagct acgcgctcag ccggggtgtg gatacgcagt tccgccatat
      721 caacattgcg gaagccgatc acttcaaaca gttcctgcgt cagattaagc gtgccggcct
      781 cgatatccgg gctatctgct gaccggatgt gatgaatacc cccctgattg ttgcaatctt
      841 gttaat
//
LOCUS       DAPGWB010000391          832 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.399, whole genome shotgun sequence.
ACCESSION   DAPGWB010000391 DAPGWB010000000
VERSION     DAPGWB010000391.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 832)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 832)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.399"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            60..350
                     /locus_tag="RHX79_004838"
     CDS             60..350
                     /locus_tag="RHX79_004838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDV2199888.1"
                     /translation="MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYF
                     TDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGNNL"
     gene            374..>832
                     /locus_tag="RHX79_004839"
     CDS             374..>832
                     /locus_tag="RHX79_004839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HDV2199889.1"
                     /translation="MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNL
                     LPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTT
                     QPPGLQNFTSINLDNNQLTHFDATNYDRLVKLSLNSNTLESINFPQGRNVS"
BASE COUNT          298 a          164 c          141 g          229 t
ORIGIN      
        1 acgccgttta aaattcgttt agaaaatacg tttaacgata attaaaagga ttctgttaaa
       61 tgaaattaaa aatagttgcg gtggttgtaa ctggtttgtt agctgcgaac gtagcacacg
      121 ctgccgaagt ctataacaag gatggtaata aactcgacct ttatggcaag gttaccgctc
      181 tacgttattt tactgatgat aagcgtgacg atggtgataa aacttatgcc cgtctcggct
      241 ttaaaggaga aacgcaaatc aatgatcaaa tgattggttt tggtcactgg gaatatgatt
      301 ttaaaggcta taacgatgaa gccaacggct cgcgcggcaa caatctctga ttgagttaag
      361 tgcccatcac aatatgatca ctgaccttat attacacaat catcccagga tgaaaacaat
      421 cactttaaac gacaaccata ttgcacattt aaacgccaaa aacactacaa aactggaata
      481 tttaaactta agcaataaca atttactgcc aaccaatgac attgatcaac taatatcatc
      541 aaaacatctt tggcatgtat tagttaacgg catcaacaat gatccacttg cacaaatgca
      601 gtactggact gcagtaagaa atataattga tgacactaat gaagtgacca ttgatttatc
      661 aggacttaat ttaaccactc aaccaccagg gctgcaaaac ttcacctcta tcaatcttga
      721 taataaccaa ctcacacatt ttgatgcaac caactacgat agactcgtaa agctaagtct
      781 gaatagtaat actcttgagt caataaattt tcctcaaggc agaaatgtaa gt
//
LOCUS       DAPGWB010000392          822 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.400, whole genome shotgun sequence.
ACCESSION   DAPGWB010000392 DAPGWB010000000
VERSION     DAPGWB010000392.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.400"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            192..794
                     /gene="fimB"
                     /locus_tag="RHX79_004840"
     CDS             192..794
                     /gene="fimB"
                     /locus_tag="RHX79_004840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria switch DNA invertase FimB"
                     /protein_id="HDV2199890.1"
                     /translation="MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIH
                     GFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHA
                     ESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRL
                     IQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL"
BASE COUNT          234 a          157 c          187 g          244 t
ORIGIN      
        1 catggcgttt gtatggcaac gttattataa ttaacagttg ctactccatt taagttcact
       61 cagaagaact ggtccactta cgttagttat taagcaaacg ttcgctttta taaacataat
      121 caggataaaa atgttggatt attgctaacc cagcacagct agtgcgcgtc tgtaattata
      181 agggaaaaac gatgaagaat aaggctgata acaaaaaaag gaacttcctg acccatagtg
      241 aaatcgaatc actccttaaa gcagcaaata ccgggcctca tgcagcacgt aattattgtc
      301 tgactttgct ttgttttatt catggtttcc gggcgagtga aatttgtcga ttgaggattt
      361 cggatattga tcttaaggca aagtgtatat atatccatcg attaaaaaaa ggcttttcaa
      421 caacgcaccc gctattgaat aaagaagttc aggctttaaa aaactggttg agtatccgta
      481 cttcgtaccc gcatgctgag agcgagtggg tatttttatc acgtaagggg aatccgcttt
      541 ctcggcaaca gttttaccat attatctcga cttccggtgg taatgccggg ttgtcactgg
      601 agattcatcc gcacatgtta cgccattcgt gtggttttgc tttggcgaat atgggaatag
      661 atacgcgact tatccaggat tatcttgggc atcgcaatat tcgtcatact gtctggtata
      721 ccgccagcaa tgcagggcgt ttttacggca tctgggatag agccagagga cgacagcgtc
      781 acgctgtttt atagagatag ttgagatacc agggatggtg tt
//
LOCUS       DAPGWB010000393          822 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.401, whole genome shotgun sequence.
ACCESSION   DAPGWB010000393 DAPGWB010000000
VERSION     DAPGWB010000393.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.401"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            182..257
                     /locus_tag="RHX79_004841"
     tRNA            182..257
                     /locus_tag="RHX79_004841"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:215..217,aa:Ile,seq:cat)
BASE COUNT          237 a          155 c          186 g          244 t
ORIGIN      
        1 taattattaa catttgcttg ttgactgcga gtatcgactt tgcgaatgga agcggtgtcg
       61 ggttttatgt cgagtgtaat gacgagcaag gatgaatgag aacgcataaa aatctgttat
      121 ttacatcata tgatcatcat gtttattgcg tggtttataa gtattgttat tgcacactca
      181 aggcccttta gctcagtggt tagagcaggc gactcataat cgcttggtcg ctggttcaag
      241 tccagcaagg gccaccaaat cattatttac gtatcaggaa gagttaaggg tacaaggggt
      301 actcgatggc ggtctatatt tcatgactaa cgccatttca aggaagaagt gcggtgggtg
      361 gtttcgaatg agggctggtg ttttggtacg tggcacgcca ctgcaatgta tttatccatc
      421 agtactcatt caaaagtacc tggaaaaaat gcctgctatg ccaagcgggc aaattgctta
      481 catgtggaat taagtaatta acgataaagc cagagtatta tcatttatca tgcctcttca
      541 tttaatcagg ttaattactc aaatcactga actattctct gttcgctcac tgatgataag
      601 tgagtgtcac aaccacgatt tgtatgcggg ccaatgccgt agagtaagga tgaaatgtct
      661 ctgccacgcc ttaaacatct actactgacc agaatacccg tcgcaggcag atgagtcttg
      721 tgagcgttac aggagtctgg ctttgctcat taatcaacgc tatttagata taaatttcta
      781 acactcgaaa aacgaatttc actaataagt cataacgggt ga
//
LOCUS       DAPGWB010000394          822 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.402, whole genome shotgun sequence.
ACCESSION   DAPGWB010000394 DAPGWB010000000
VERSION     DAPGWB010000394.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.402"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            331..756
                     /locus_tag="RHX79_004842"
     CDS             331..756
                     /locus_tag="RHX79_004842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311733.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199891.1"
                     /translation="MDIEFSQIHEMVYMHDIVNSDSKKKPRIPLKKFLNAEKVLTQTT
                     SWALNSRFVNVNSVNKVNVKSKVKSSYISRSVNDEFSLTDDEINSFKETLVLSSIDSL
                     SKLVLNNPLSVLFTSTVRRNNNRAKMNVELDSWICTRCC"
BASE COUNT          265 a          121 c          152 g          284 t
ORIGIN      
        1 tcaatataat ttaaacaaga ccccattgtg attttaactg gattaacgga tttctcttca
       61 tttttcttat ttttgttctc ctgatcagga actaatggtt gcagtggtag gctattatta
      121 atatttcgtg gcttcatttt acatttctct catttgatta gagcaaaatc cgaattcgca
      181 gcttctgata atgtcaaata tcaccttatg gagacgttac gtagaatgac tatatttgtt
      241 atcggcacat taggggtatt aattttagta ttgatggaag gtgattattg aacagtaaca
      301 tcgagtcacg gtaaaaatgt gaggtatata atggacattg agttttcgca gattcatgaa
      361 atggtctata tgcatgatat tgtaaattcg gactcgaaaa agaaaccaag gattccgtta
      421 aaaaaattcc ttaatgctga gaaggttctc acgcaaacaa catcatgggc attaaattca
      481 agatttgtga atgttaattc tgtcaataaa gtcaacgtaa agagtaaagt taaaagcagt
      541 tatatctcac gatctgtcaa tgatgagttt agtttaacag atgatgaaat caattctttt
      601 aaagaaacgt tagtcctttc ctctattgat tcactgagta aactggttct taataatcct
      661 ctttctgtat tgtttacatc gactgtacga aggaataata atcgagctaa gatgaatgtc
      721 gagctcgact catggatttg caccagatgt tgttgataca tgatatttta cattgcaagg
      781 agatgtctaa aatgaaagat gttgatcaaa actttgatgc tt
//
LOCUS       DAPGWB010000395          815 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.403, whole genome shotgun sequence.
ACCESSION   DAPGWB010000395 DAPGWB010000000
VERSION     DAPGWB010000395.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.403"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            46..>815
                     /locus_tag="RHX79_004843"
     CDS             46..>815
                     /locus_tag="RHX79_004843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV2199892.1"
                     /translation="MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEA
                     FPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRGFK
                     IHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIML
                     SAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRIL
                     DSGINCKKHPWLYFPLAKSSPGMIVMACNKNYNQHEVA"
BASE COUNT          271 a          160 c          159 g          225 t
ORIGIN      
        1 aaactatgtg atctccattt cgattgattt agtgtttatt gacgtatgta ctggattatt
       61 aacgataata tcgagttctg gcctgagcac cgaaaattaa tatcggtaca taacgccgat
      121 cttaacgtcg ttctgacaac gccagccagt cgatgtttat cacttctact tgaagctttt
      181 cctgatgtgg ttgcacaaca agattttttc accagagtct gggaagaaga aggtatgcgt
      241 gtgcctacta acacgttata tcagaacata tccattatca gacgcggatt tcgcgctgtt
      301 ggtgatacta cccactcgct aattgcaacc gtgccgagaa gaggattcaa gatccataat
      361 gacattaaca tacaaaatca tgtaataaac tcgtcaacag acgcacatac acacaatgcc
      421 ccacctgcca taaaagttaa tgcgggatac aaagagagca ttggtggcgc aaagaatttc
      481 aataacaaaa tcctcaaaca tataaaaagt catctaatta tgttgagcgc atttgtcata
      541 ggcgcatatt ctgcatattg gctatggaat aataatcaac cgaagccatt tttcaaggat
      601 tacaagactg ttgcggaaat taatggctgc cattttaatg taacagaaga tacaattgac
      661 gggttgaaag agttcgataa atataaaaca cggatactgg attcggggat taactgtaaa
      721 aaacatccgt ggttatactt ccctcttgca aaatcctcac cggggatgat tgttatggca
      781 tgcaataaaa attataacca acatgaagtg gcaga
//
LOCUS       DAPGWB010000396          800 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.404, whole genome shotgun sequence.
ACCESSION   DAPGWB010000396 DAPGWB010000000
VERSION     DAPGWB010000396.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.404"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            56..772
                     /locus_tag="RHX79_004844"
     CDS             56..772
                     /locus_tag="RHX79_004844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDV2199893.1"
                     /translation="MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELN
                     TSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSN
                     VNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGSDPDHIFEILLEAEVDVRD
                     VTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGL
                     VDALEDDDDVQKVYHNVANL"
BASE COUNT          265 a          140 c          170 g          225 t
ORIGIN      
        1 acacatgtta acgatttacc agtaatgtaa ataaattttc gaggagatca ttccagtggg
       61 acgtaaatgg gccaatattg ttgctaaaaa aacggctaaa gacggtgcaa cgtctaaaat
      121 ttatgcaaaa ttcggtgtag aaatctatgc tgctgctaaa caaggtgaac ccgatccaga
      181 attaaacaca tctttaaaat tcgttattga acgtgcaaag caggcacaag ttccaaagca
      241 cgttattgat aaagcaattg ataaagccaa aggcggcgga gatgaaacgt tcgtgcaggg
      301 acgttatgaa ggctttggtc ctaatggctc aatgattatc gccgagacat tgacttcaaa
      361 tgttaaccgt acgattgcta acgttcgcac aattttcaat aaaaaaggcg gcaatatcgg
      421 agcggcaggt tctgtcagct atatgtttga caatacgggt gtgattgtat ttaaaggatc
      481 agaccctgac catatttttg aaattttact tgaagctgaa gttgatgttc gtgatgtgac
      541 tgaagaagaa ggtaacattg ttatttatac cgaacctact gaccttcata aaggaatcgc
      601 ggctctaaaa gcagctggaa tcactgagtt ctcaacaaca gaattagaaa tgattgctca
      661 atctgaagtt gagctttccc cagaagattt agaaatcttt gaagggcttg ttgatgccct
      721 tgaagatgac gacgatgtac aaaaagttta tcataacgtc gcaaatctct aattatcttt
      781 taaagaaatc tgtctttacg
//
LOCUS       DAPGWB010000397          800 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.405, whole genome shotgun sequence.
ACCESSION   DAPGWB010000397 DAPGWB010000000
VERSION     DAPGWB010000397.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.405"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            9..>800
                     /locus_tag="RHX79_004845"
     CDS             9..>800
                     /locus_tag="RHX79_004845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2199894.1"
                     /translation="MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQS
                     LQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLKGLEQTINIVNKSELKKNFII
                     YGPQLISCSNNSMLIRCLRQDASVEIECHDILMSAENAEELLVHRKADLVITQMPVIS
                     RSVICMPLHTIRNTLICSNKHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDER
                     FMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEI"
BASE COUNT          251 a          176 c          144 g          229 t
ORIGIN      
        1 agtagtgtat ggccaatctc tacgacttga aaaagttcga cttaaacctt cttgtcatat
       61 ttgagtgtat ttaccagcat ttaagcatta gcaaagctgc tgaatcacta tatatcaccc
      121 catcagccgt gagccagtcg ttacaacgct tacgtgcgca atttaatgac cctttattca
      181 ttcgctcagg aaaaggtatc gcgccgacga caacagggtt gaatctgcat caccatcttg
      241 agaaaaacct caaaggcctt gaacaaacaa ttaatatagt caataagtcc gaactaaaga
      301 aaaactttat tatctacggc cctcagctca tttcttgctc taataatagt atgctgatcc
      361 gctgcctacg gcaagatgcc tctgtcgaga ttgagtgcca tgatatcctc atgtcagcag
      421 agaatgctga agaactgttg gttcaccgca aagccgatct ggtgatcacc caaatgccag
      481 tgatcagccg ttccgtcatt tgcatgccat tgcatacaat tcgcaatact ctaatttgta
      541 gtaataagca tccgcgaatt actgacaata gcacttatga acaaattatg gcagaagagt
      601 tcacccaatt aatatccaaa tcagcaggag ttgatgatat tcaaatggaa atagacgaga
      661 gatttatgaa tcgcaaaatc tcatttcgtg gttcctcttt gctgacaatc attaatagca
      721 ttgcagttac agatttactg ggaatagtcc cctatgaact ttataattcc taccgtgact
      781 ttcttaattt aaaagagata
//
LOCUS       DAPGWB010000398          782 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.406, whole genome shotgun sequence.
ACCESSION   DAPGWB010000398 DAPGWB010000000
VERSION     DAPGWB010000398.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.406"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..466
                     /locus_tag="RHX79_004846"
     CDS             <1..466
                     /locus_tag="RHX79_004846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV2199895.1"
                     /translation="GEFAGGMMGSELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAG
                     AKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQL
                     IADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI"
     gene            complement(511..762)
                     /locus_tag="RHX79_004847"
     CDS             complement(511..762)
                     /locus_tag="RHX79_004847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001486048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDV2199896.1"
                     /translation="MQINQMHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSR
                     CGVTWQCLGTYNAGFAMDNQKKRQQYAPKYILYIPGLMN"
BASE COUNT          257 a          131 c          146 g          248 t
ORIGIN      
        1 aggagaattt gcaggtggaa tgatggggtc cgaactcgta aaatgggtta aatcgcataa
       61 gatagatgct catattatta catttgtagc aaagatgccg tatattgatt caataaaatt
      121 gcttgaagca ggtgcgaaag gatgcgtatg gaaaaccagt cacccggcga aactaaatcg
      181 tgctattgat tcgattagta atggttacac ttattttgat agtgtacata tggattgtga
      241 aaaaatatct tccaggtatt cctctgataa tcaacttaca aatcgtgagt cagaaatatt
      301 acaactcata gctgatggta aaacaaacaa agaaatcgct aatttcttgc agttaagcag
      361 aaaaacagtc gaaactcata gactcaatat catgaagaaa ttagatgttc acagtggtat
      421 cgagttgatc aaaacagctt tacgtatggg tgtttgcact atataaaaaa aagaggcttt
      481 aggcacattt tgctgaagcc ttacgattgt ctagttcatt aagcctggta tatacaatat
      541 atattttggg gcatattgct gtctcttttt ttggttatcc attgcaaaac ccgcattata
      601 agtccccagg cattgccacg ttactccaca acgtgaaaaa tggttatata aaatctcggt
      661 tcctatttta atgttcagac aagggttatc taacaaatct cgttcatctt ttattattcc
      721 acgttttttt aacaggggaa tatgcatctg gtttatctgc attaaccaat aatctaaact
      781 ct
//
LOCUS       DAPGWB010000399          775 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.408, whole genome shotgun sequence.
ACCESSION   DAPGWB010000399 DAPGWB010000000
VERSION     DAPGWB010000399.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.408"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>775
                     /locus_tag="RHX79_004848"
     rRNA            <1..>775
                     /locus_tag="RHX79_004848"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          218 a          171 c          237 g          149 t
ORIGIN      
        1 cgggacacgt ggtatcctgt ctgaatatgg ggggaccatc ctccaaggct aaatactcct
       61 gactgaccga tagtgaacca gtaccgtgag ggaaaggcga aaagaacccc ggcgagggga
      121 gtgaaaaaga acctgaaacc gtgtacgtac aagcagtggg agcacgctta ggcgtgtgac
      181 tgcgtacctt ttgtataatg ggtcagcgac ttatattctg tagcaaggtt aaccgaatag
      241 gggagccgaa gggaaaccga gtcttaactg ggcgttaagt tgcagggtat agacccgaaa
      301 cccggtgatc tagccatggg caggttgaag gttgggtaac actaactgga ggaccgaacc
      361 gactaatgtt gaaaaattag cggatgactt gtggctgggg gtgaaaggcc aatcaaaccg
      421 ggagatagct ggttctcccc gaaagctatt taggtagcgc ctcgtgaatt catctccggg
      481 ggtagagcac tgtttcggca agggggtcat cccgacttac caacccgatg caaactgcga
      541 ataccggaga atgttatcac gggagacaca cggcgggtgc taacgtccgt cgtgaagagg
      601 gaaacaaccc agaccgccag ctaaggtccc aaagtcatgg ttaagtggga aacgatgtgg
      661 gaaggcccag acagccagga tgttggctta gaagcagcca tcatttaaag aaagcgtaat
      721 agctcactgg tcgagtcggc ctgcgcggaa gatgtaacgg ggctaaacca tgcac
//
LOCUS       DAPGWB010000400          771 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.409, whole genome shotgun sequence.
ACCESSION   DAPGWB010000400 DAPGWB010000000
VERSION     DAPGWB010000400.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 771)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.409"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            63..>771
                     /locus_tag="RHX79_004849"
     CDS             63..>771
                     /locus_tag="RHX79_004849"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199897.1"
                     /translation="MLVAFSLENYKSFRERQVLSFASSIGDEHPEHIVTLANGLRVNR
                     FAALIGGNGVGKTQLINAITEFANSIHSDTLHKLHMPFLLNKECRNKPTSYEAILIDE
                     EQKNFVRYGVSVLNEVIVDEYLYIRPIRKNAREQCIFIRNENGLVFKKPDLKKYESLI
                     NPVLRESGAVVTFAKSLEIDALVETQRWALKQLPYYSEKFKNPSLKFVEGQLKRQLSG
                     EEGNEKLNESGQRILNTY"
BASE COUNT          276 a          115 c          148 g          232 t
ORIGIN      
        1 cactggatta cattaccgaa atagtcaaaa atgcgttttt tacgcaaaaa tgaggacttc
       61 agatgctagt tgcattcagt ttagaaaatt acaagagctt tcgcgaaaga caggttctta
      121 gttttgcttc ctcaattggg gatgagcatc ctgaacatat cgtgacatta gcgaatggtt
      181 taagagtaaa cagatttgcc gcattaatag gcggaaatgg tgttggtaaa acacaattaa
      241 taaatgctat tactgaattt gcaaattcaa ttcatagtga cacattacac aaattgcata
      301 tgcctttcct tctaaataag gaatgtcgta acaaacctac ttcctatgaa gcgatactga
      361 ttgatgaaga gcaaaaaaac ttcgtccgtt atggtgtgtc agttttaaat gaagttattg
      421 tagatgagta tttatacatt agaccgataa gaaaaaatgc aagggaacaa tgtattttta
      481 ttcgcaatga aaatgggttg gttttcaaaa agcccgactt aaaaaaatac gagtcgttga
      541 ttaatcctgt cttaagagaa agtggagctg ttgtaacttt tgcaaaatct ttagaaattg
      601 atgctcttgt tgaaacccaa cgctgggcat taaaacaatt gccttattac tctgaaaaat
      661 tcaaaaatcc aagtcttaaa tttgttgaag gacaacttaa gcgccagtta tcaggtgagg
      721 aaggaaatga aaaattaaat gagagtggtc aaagaatttt aaatacctat a
//
LOCUS       DAPGWB010000401          768 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.410, whole genome shotgun sequence.
ACCESSION   DAPGWB010000401 DAPGWB010000000
VERSION     DAPGWB010000401.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.410"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..458
                     /locus_tag="RHX79_004850"
                     /pseudo
     CDS             1..458
                     /locus_tag="RHX79_004850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284686.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EscU/YscU/HrcU family type III secretion system
                     export apparatus switch protein"
     gene            complement(520..>768)
                     /locus_tag="RHX79_004851"
     CDS             complement(520..>768)
                     /locus_tag="RHX79_004851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000060689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein"
                     /protein_id="HDV2199898.1"
                     /translation="LISLLSACTIENSLKENQNKRSGESQAIVDARQFFSEHPEYISS
                     AELEQKLYREFAQVTTVPAYKEMSMYQLLVISQDRLTH"
BASE COUNT          261 a          135 c          144 g          228 t
ORIGIN      
        1 caagaaggaa atccagaaat taagtctaaa cgcagagagc gcatcaggaa attctttctg
       61 agcaattgaa gtctgatgtc agtaatagtc gtttgatgat tgccaaccct actcacattg
      121 caataggaat atactttaag ccacatcttt cacctattcc attgatttct gtaagagaaa
      181 ctaatgaggt agccttagcc gtaaggaaat atgcaaagga aatcggaata ccaattatca
      241 cagataaaaa attagcacga aaaatttatg ctacccatcg tcgctacgat tatgttagct
      301 tcgaaaatat agatgaaata ttacgtcttc tgctgtggct tgaagatgtg gagaatgctg
      361 gacaacctgt tccagatgaa cagctctctt cagaagataa attcattgaa ggtgaagaga
      421 aagaaatcga gaataaagac gataatttaa aaaattaaac atctgtcgta gtcagaaatt
      481 tataagaatc tacacgcaaa aaccgtgtag attcattatt taatgagtta aacgatcttg
      541 tgaaatgaca agcaattgat acatactcat ctctttataa gctggaactg tagtaacctg
      601 tgcaaattcg cgatatagct tttgctccag ttctgctgaa gatatatatt ccgggtgttc
      661 gctaaagaac tgtcttgcat ctactatcgc ttgggattcg ccacttcttt tattttgatt
      721 ctcctttaat gaattttcta tggtgcatgc agagagcaac gatatcag
//
LOCUS       DAPGWB010000402          763 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.411, whole genome shotgun sequence.
ACCESSION   DAPGWB010000402 DAPGWB010000000
VERSION     DAPGWB010000402.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.411"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..615
                     /locus_tag="RHX79_004852"
     CDS             <1..615
                     /locus_tag="RHX79_004852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
                     /protein_id="HDV2199899.1"
                     /translation="MEGNKDSRINKNVVVLAGNHEINFNGNYTARLANHKLSAGDTYN
                     LIKTLDVCNYDSERQVLTSHHGIIRDEEKKCYCLGALQVPFNQMKNPTDPEELANIFN
                     KKHKEHMDDRFIHLIRSNAIASTPVYDNYFNNTTAFRPKPEDIFKCGQTLKKTKQKYG
                     HYGLGVDQHQKIDNYTMGLNSWKIAPNERGDKKGVPGLSCFQPH"
BASE COUNT          265 a          129 c          137 g          232 t
ORIGIN      
        1 atggagggta ataaagatag ccgtattaat aaaaatgtcg tcgttctggc tggaaatcat
       61 gaaatcaatt ttaatggtaa ctatactgca cgactagcaa atcataaact ctctgccggt
      121 gatacgtata acttaattaa aacgctcgat gtttgtaatt atgactcaga aaggcaagtt
      181 ttaaccagtc atcacggaat aataagagat gaagaaaaaa aatgttattg tctcggtgct
      241 ttgcaggttc catttaatca gatgaaaaat cctactgatc ctgaggaatt agccaatatt
      301 tttaataaaa aacataaaga acacatggat gatcgtttta tccatctaat tagaagcaat
      361 gctatagcat ccacacctgt atatgacaat tattttaata acactactgc tttcagacca
      421 aaacctgaag atatcttcaa atgtggacag acgctcaaaa aaactaaaca gaaatatggc
      481 cattatggat taggggtaga tcagcatcaa aaaattgata attataccat ggggctaaat
      541 tcctggaaga tagctcctaa cgaacgtggt gataaaaaag gtgtcccagg gcttagttgt
      601 tttcaaccac attaaaactc catgagtgct gtggtatatc tttttaatcc tgccagtatt
      661 tcataggttt tcttaatcga ttgtagaggc atgttctgat gacgcctcta caatctttag
      721 ggactttctc tgctatgaga taagaaattt catattatgc ttt
//
LOCUS       DAPGWB010000403          751 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.412, whole genome shotgun sequence.
ACCESSION   DAPGWB010000403 DAPGWB010000000
VERSION     DAPGWB010000403.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 751)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.412"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
BASE COUNT          181 a          153 c          168 g          249 t
ORIGIN      
        1 cctgtggcgt atgcatgatg caaggttgaa cgcatgtaat atgatattta tcacgtaaat
       61 gcagtgtaat cttcttgcat tgtttttagg ttgctattcc gtttatctga ggactgctgg
      121 ctattgttgt gcagttttcc tgatacagct ttatgcaggt tttccagcat tacagtaaaa
      181 cccgggaaca tcagtgctgc tcgtttcttt ctcctgtatc cactcccgct tatggatact
      241 tccttaaata ttctctcgtc tgactaaagc atatataccc gctcatggga tgttggctgt
      301 aatgattttc ctgagcggat tattactgat gaccataagt atgtctcagc acagtcatcg
      361 taacgtgctg gttaacctgg ccatggtagc caaatcatca tcctgtatat tctgttgagg
      421 gaggcactgg tgattgttca gaatacggct gatgcgaaaa agtgtaggct gtttccttta
      481 ttggtgtgat gtacagcctc tttacgctct actattccgg ggaagaagcc atgctgtagc
      541 actttattgt tacttttcct ggctggacac tgtatggtct ggtatccccc cacgttttga
      601 acggaaaaaa cagatttaaa gttgccagta gtctgtaagt ttctgcatcc catttcccca
      661 cagacagtat tctcctgcaa tgtgatgaat ggtttcctgg aacaggaaag gaactaagtt
      721 agatagtgga gaaagtgatt aacacgttgt t
//
LOCUS       DAPGWB010000404          739 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.413, whole genome shotgun sequence.
ACCESSION   DAPGWB010000404 DAPGWB010000000
VERSION     DAPGWB010000404.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.413"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..521)
                     /locus_tag="RHX79_004853"
     CDS             complement(<1..521)
                     /locus_tag="RHX79_004853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscU/YscU/HrcU family type III secretion system
                     export apparatus switch protein"
                     /protein_id="HDV2199900.1"
                     /translation="MANKTEKPTQKKLQDASKKGQILKSRDLTISVIMLVGTLYLGYV
                     FDVHHIMSILEYILDHNAKPDIWDYFKAMGVGWLKTNIPFLLVCMFTTILVSWFQSKM
                     QLATEAVKFKFDSLNPVNGLKRIFGLKTVKEFVKAILYIVFFALAIKVFWSNHKSLLF
                     KTLDGDIISLLSD"
     gene            complement(530..724)
                     /locus_tag="RHX79_004854"
     CDS             complement(530..724)
                     /locus_tag="RHX79_004854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000900463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein"
                     /protein_id="HDV2199901.1"
                     /translation="MLGGEAVLGLLACYASQLNAFAISLTVKSALAFLILIIYFAPIL
                     AERVMPLSFFPEQLQLYIEK"
BASE COUNT          257 a          137 c          123 g          222 t
ORIGIN      
        1 caatctgata ataaagatat gatatctcca tcaagagttt taaaaagcag tgatttatga
       61 ttactccaaa atactttgat cgccaatgca aaaaaaacaa tataaagaat tgctttaaca
      121 aattctttta cggtttttaa gccaaatata cgctttaagc catttactgg attcaatgaa
      181 tcaaacttaa atttaacagc ttcagttgct aattgcattt tactttgaaa ccaggagaca
      241 agtattgttg tgaacatgca aaccagcaaa aaaggaatgt tcgttttcaa ccaaccaacc
      301 cccatagctt taaaatagtc ccaaatatct ggtttagcgt tatgatcaag gatgtattca
      361 agaatcgaca taatgtgatg cacatcaaaa acatatccga gatataaagt acccacaagc
      421 attattacag agatggttaa gtctctactt tttagaattt gccctttttt agaagcatcc
      481 tggagtttct tttgtgttgg cttttcagtt ttattggcca tgaaacactc tatttctcaa
      541 tgtatagttg caattgttct gggaaaaagg ataacggcat tactcgttca gccagtattg
      601 gggcaaaata aataattaat attaaaaatg ccagcgcact tttgacagtc agtgaaatgg
      661 caaaagcatt tagttgtgaa gcataacatg ccagcaatcc caggacagcc tcaccgccca
      721 gcataacggc aatcacggg
//
LOCUS       DAPGWB010000405          729 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.414, whole genome shotgun sequence.
ACCESSION   DAPGWB010000405 DAPGWB010000000
VERSION     DAPGWB010000405.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.414"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>729
                     /locus_tag="RHX79_004855"
     CDS             <1..>729
                     /locus_tag="RHX79_004855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS3-like element IS3 family transposase"
                     /protein_id="HDV2199902.1"
                     /translation="FIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQH
                     CDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVS
                     YRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSM
                     SPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKG
                     CCYDNACVESFFHSLKVECIHGEH"
BASE COUNT          164 a          192 c          220 g          153 t
ORIGIN      
        1 tctttattga aaaacatcag gctgagttca gcatcaaagc aatgtgccgc gtgctccggg
       61 tggcccgcag cggctggtat acgtggtgtc agcggcggac aaggataagc acgcgtcagc
      121 agttccgcca acactgcgac agcgttgtcc tcgcggcttt tacccggtca aaacagcgtt
      181 acggtgcccc acgcctgacg gatgaactgc gtgctcaggg ttaccccttt aacgtaaaaa
      241 ccgtggcggc aagcctgcgc cgtcagggac tgagggcaaa ggcctcccgg aagttcagcc
      301 cggtcagcta ccgcgcacac ggtctgcctg tgtcagaaaa tctgttggag caggattttt
      361 acgccagtgg cccgaaccag aagtgggcag gagacatcac gtacttacgt acagatgaag
      421 gctggctgta tctggcagtg gtcattgacc tgtggtcacg tgccgttatt ggctggtcaa
      481 tgtcgccacg catgacggcg caactggcct gcgatgccct gcagatggcg ctgtggcggc
      541 gtaagaggcc ccggaacgtt atcgttcaca cggaccgtgg aggccagtac tgttcagcag
      601 attatcaggc gcaactgaag cggcataatc tgcgtggaag tatgagcgca aaaggttgct
      661 gctacgataa tgcctgcgtg gaaagcttct ttcattcgct gaaagtggaa tgtatccatg
      721 gagaacact
//
LOCUS       DAPGWB010000406          712 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.415, whole genome shotgun sequence.
ACCESSION   DAPGWB010000406 DAPGWB010000000
VERSION     DAPGWB010000406.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.415"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..710)
                     /locus_tag="RHX79_004856"
     CDS             complement(<1..710)
                     /locus_tag="RHX79_004856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709944.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HDV2199903.1"
                     /translation="MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLP
                     WALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFCYFAILMTVSADMPLVGCV
                     LTLLLLVLLIFMAAKGLRYQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTV
                     FFISTKMLHANSSSSVIISVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFK
                     VKLDTTYCIKYAILAFLA"
BASE COUNT          287 a          158 c          100 g          167 t
ORIGIN      
        1 aaagctaaaa atgcgagaat ggcatatttt atacaatacg tagtatctaa tttcaccttg
       61 aaacgatgta taccgaaact ggtattgctc cagagaaaac tcattaccag gctatataaa
      121 gtaccattaa aaataccaat ggaaacaata ccaactattg ccatcagaac cacagatata
      181 ataacactac ttgaactatt ggcatgtagc atctttgtcg agataaagaa aacagtcccc
      241 atcccaatgg ccattaaaat cggcaagaaa aaggttaccc accagaaccc tttcatagag
      301 caattaaaac taaatcttac gccgttgaga ctggtcatca aggcctgata acgcagtcct
      361 tttgctgcca taaatataag caaaaccaac agtaacaaag tcaaaacaca gccaacaagt
      421 ggcatatctg ctgacactgt cattaagatt gcgaaatagc aaaaaacaaa aacaagacaa
      481 ctaacaaaaa cattcccacc agtaattcca taagaaaatc gttgtccgtt aacttccata
      541 ttagcataga gataacgctt acatttcatt aatgcccatg gcaaatagat acctagcgtt
      601 ataatcgtta acaacacatt caccacacaa ataagaaaat atctctcacc tgtaccatga
      661 aaaacaaacg aatgggacgg aacatccatt tcattaataa cttgagccat aa
//
LOCUS       DAPGWB010000407          699 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.416, whole genome shotgun sequence.
ACCESSION   DAPGWB010000407 DAPGWB010000000
VERSION     DAPGWB010000407.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 699)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 699)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.416"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>699
                     /locus_tag="RHX79_004857"
     CDS             <1..>699
                     /locus_tag="RHX79_004857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001102791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytotoxin"
                     /protein_id="HDV2199904.1"
                     /translation="RQRAIYPYFESANADEQQPVFFYIKKNRFDDFGYDQYFYNSTVG
                     LNGIPTLNTYTGEILSDASSLGSTYWKKYNLTNETSIIRVSNSARGANGIKIALEEVQ
                     EGKPVIITSGNLSGCTTIVARKGGYLYKVHTGTTIPLAGFTSTTGVKKAVEVFELLTN
                     NPMPRVEGVMNNDFLVNYLAESFDESLITYSSSEQKIGSKITISRDNVSTFPYFLDNI
                     PEKGFGTSVTILVRV"
BASE COUNT          231 a          117 c          140 g          211 t
ORIGIN      
        1 cgtcagcgtg cgatttatcc gtattttgaa tctgctaatg ctgatgagca acaacctgtc
       61 tttttctaca tcaaaaaaaa ccggtttgat gactttggct atgatcaata tttctataat
      121 agtacagtgg ggttgaatgg tattcccaca ttgaacacct atactggaga aattctatca
      181 gacgcatcct cgctcggctc aacttattgg aagaagtata atctcactaa tgaaacaagc
      241 atcattcgtg tatcaaattc tgctcgaggg gcaaatggta taaaaatagc acttgaagaa
      301 gtgcaggaag gtaaaccggt aatcattaca agcggaaatt tgagcggttg tacaacaatt
      361 gttgctcgaa aaggaggata cctttataag gtacatacag gtacaacaat acctttagct
      421 ggttttacaa gtacaacagg ggtaaaaaaa gctgtagaag tttttgaatt acttacaaat
      481 aatccaatgc cgcgcgtaga gggagtaatg aataatgatt ttttggtaaa ttatctggcg
      541 gaaagttttg atgagtcttt aataacgtac tcatcatctg aacaaaaaat aggtagtaag
      601 attactattt ctcgcgacaa tgtttctact tttccttact ttcttgataa cataccagaa
      661 aaaggctttg gtacatcggt gactatattg gtaagagta
//
LOCUS       DAPGWB010000408          698 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.417, whole genome shotgun sequence.
ACCESSION   DAPGWB010000408 DAPGWB010000000
VERSION     DAPGWB010000408.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.417"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(27..>698)
                     /gene="traX"
                     /locus_tag="RHX79_004858"
     CDS             complement(27..>698)
                     /gene="traX"
                     /locus_tag="RHX79_004858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer pilus acetylase TraX"
                     /protein_id="HDV2199905.1"
                     /translation="LVWSPGQRDIIKTVALVLMVLDHANRIRHLDQSWMFLVGRGAFP
                     LFALVWGLNLSRHAHIRQPAINRLWGWAMIAQFAYYLAGFPWYEGNILFAFAVAAQVL
                     TWCETRSGWRTAAAILLMALWGPLSGTSYGIAGLLMLAVSHRLYRAEDRTERLVLVAC
                     LLAVIPALNLASSDAAAVAGLVMTVLTVGLVSRVGKSLPRFWPGDFFPTFYGCHLAVL
                     GILAL"
BASE COUNT          187 a          231 c          175 g          105 t
ORIGIN      
        1 cagaatcagc gtcagtatca taccagtcac aacgccagaa tgcccagcac agccagatga
       61 cagccataga acgtcgggaa aaaatctccg ggccagaaac ggggtaatga ttttcctaca
      121 cgcgacacca gaccaacggt cagcaccgtc atcacaagac cagctacagc cgccgcatca
      181 ctggaggcaa ggttaagtgc cggaatcacg gccagcaggc atgcaaccag caccagacgt
      241 tccgttctgt cttccgcccg gtacagccgg tgactgactg ccagcatcag cagcccggca
      301 atgccgtaac tggtgccgga caaaggcccc cacagtgcca tcaggagaat ggccgctgca
      361 gtacgccacc cactgcgcgt ttcacaccat gtcagcacct gtgccgccac tgcaaaggca
      421 aacaggatat tcccctcata ccagggaaag ccggccagat aatatgcgaa ctgggcaatc
      481 atcgcccatc cccacagccg gttaatggcc ggttgccgga tatgcgcatg acgggacaga
      541 ttcagccccc acaccagggc aaacagcgga aaggccccac gcccaaccag aaacatccac
      601 gactggtcca gatgccgaat gcggtttgca tggtccagaa ccatcagcac cagtgccacc
      661 gttttgatga tatcccgctg tccgggtgac cagaccag
//
LOCUS       DAPGWB010000409          686 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.418, whole genome shotgun sequence.
ACCESSION   DAPGWB010000409 DAPGWB010000000
VERSION     DAPGWB010000409.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 686)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 686)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.418"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>686
                     /locus_tag="RHX79_004859"
     rRNA            <1..>686
                     /locus_tag="RHX79_004859"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          175 a          155 c          226 g          130 t
ORIGIN      
        1 ctgagaggat gaccagccac actggaactg agacacggtc cagactccta cgggaggcag
       61 cagtggggaa tattgcacaa tgggcgcaag cctgatgcag ccatgccgcg tgtatgaaga
      121 aggccttcgg gttgtaaagt actttcagcg gggaggaagg gagtaaagtt aatacctttg
      181 ctcattgacg ttacccgcag aagaagcacc ggctaactcc gtgccagcag ccgcggtaat
      241 acggagggtg caagcgttaa tcggaattac tgggcgtaaa gcgcacgcag gcggtttgtt
      301 aagtcagatg tgaaatcccc gggctcaacc tgggaactgc atctgatact ggcaagcttg
      361 agtctcgtag aggggggtag aattccaggt gtagcggtga aatgcgtaga gatctggagg
      421 aataccggtg gcgaaggcgg ccccctggac gaagactgac gctcaggtgc gaaagcgtgg
      481 ggagcaaaca ggattagata ccctggtagt ccacgccgta aacgatgtcg acttggaggt
      541 tgtgcccttg aggcgtggct tccggagcta acgcgttaag tcgaccgcct ggggagtacg
      601 gccgcaaggt taaaactcaa atgaattgac gggggcccgc acaagcggtg gagcatgtgg
      661 tttaattcga tgcaacgcga agaacc
//
LOCUS       DAPGWB010000410          672 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.419, whole genome shotgun sequence.
ACCESSION   DAPGWB010000410 DAPGWB010000000
VERSION     DAPGWB010000410.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.419"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..542)
                     /locus_tag="RHX79_004860"
     CDS             complement(<1..542)
                     /locus_tag="RHX79_004860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001365813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrgH/EprH family type III secretion apparatus
                     protein"
                     /protein_id="HDV2199906.1"
                     /translation="MENNDKFLSQELLESYAIRLLSGPLNGCEYEILNGRLLVIIGND
                     VSLGRSDAFSELPENTIVVPYGELTGSFEIIITTDPDLVVTFRELTAQEPEDRTLTLN
                     QQIEVLGLKFAVKEKNEVWQYSLPGIIENNIISTKQHFFSSKLFKYVMLFFLFAIIFI
                     AFYIVNASNDPQLRHIDKILV"
BASE COUNT          240 a          122 c           97 g          213 t
ORIGIN      
        1 acaagaattt tatcgatatg tctcagctgc ggatcattac tggcattaac aatataaaaa
       61 gcaatgaaaa tgatagcaaa aagaaaaaaa agcattacat acttaaacag cttactgcta
      121 aagaaatgtt gttttgtaga aataatgtta ttttcaataa tgcctggcaa tgaatactgc
      181 caaacttcat ttttttcttt tacagcaaat ttgagaccta aaacttctat ttgctgattc
      241 aatgttaacg ttctatcttc aggttcttgt gctgttaatt ctctgaatgt tactaccaga
      301 tcagggtcgg tagtaattat tatctcaaaa ctacctgtaa gctcgccata aggaacgact
      361 attgtgtttt ctggtaactc agaaaaagca tcacttcttc ctaacgaaac atcattacca
      421 atgataacaa gtagacgccc attaagtatt tcatactcgc atccattcaa tggtccgctc
      481 aacaaacgaa tggcataaga ttccaataat tcttgtgata agaatttatc attattttcc
      541 atgaatacca cccgctaatt ccataagctc tagtttagag tagtgtaaca agacggaaat
      601 atcatgacca aattatgatg acacagaata aaaaaattat aatttagaga actattttaa
      661 atgcctctat gc
//
LOCUS       DAPGWB010000411          664 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.420, whole genome shotgun sequence.
ACCESSION   DAPGWB010000411 DAPGWB010000000
VERSION     DAPGWB010000411.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.420"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(48..431)
                     /locus_tag="RHX79_004861"
     CDS             complement(48..431)
                     /locus_tag="RHX79_004861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxosome protein TraM"
                     /protein_id="HDV2199907.1"
                     /translation="MAKIQVYVNDHVSEKINAIAVQRRAEGAKEKDVSYSSIASMLLE
                     LGLRVYEAQMERKESAFNQAEFNKLLLECVVKTQSTVAKILGIESLSPHVSGKPKFEY
                     ANMVEDIREKVSVEMERFFPKNDDE"
BASE COUNT          219 a          157 c           77 g          211 t
ORIGIN      
        1 accataaaaa accatgatat ttgaacaaag tcaaaattta tttcacttta ttcatcatca
       61 ttttttggaa agaacctttc catctcaacc gacaccttct ctctgatatc ttcaaccata
      121 ttggcatatt caaacttcgg ttttccggaa acatgagggc taagagactc aatacctaaa
      181 atctttgcca ccgttgactg cgtttttaca acacactcaa gaagaagttt attaaactct
      241 gcctgattaa acgctgattc ttttcgttcc atctgcgctt cataaactcg caatcctaac
      301 tcaagcaaca tagaggcaat acttgaataa ctaacatctt tctcttttgc tccctctgct
      361 cgcctttgca cagcaatagc atttattttt tcagacacat ggtcattaac ataaacctga
      421 attttggcca taacacacct tattcacctt cctaaacaaa caatatattt tcgtgctctc
      481 tattctgcac cttatgacga atcaccatta gattcatcat actaaaatca cgattcacta
      541 tacgaatcag caatcatcaa atgacgaatc taatatagat tcacgcgcca agtaaataga
      601 tgttttcaaa aaaaatagtc attactgaat cattgacaat tcgtgataga ttcactatcg
      661 aatc
//
LOCUS       DAPGWB010000412          656 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.421, whole genome shotgun sequence.
ACCESSION   DAPGWB010000412 DAPGWB010000000
VERSION     DAPGWB010000412.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.421"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            62..628
                     /gene="slp"
                     /locus_tag="RHX79_004862"
     CDS             62..628
                     /gene="slp"
                     /locus_tag="RHX79_004862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein Slp"
                     /protein_id="HDV2199908.1"
                     /translation="MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQ
                     PGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFL
                     DPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
                     YGAFWPEPGWGAPYYTNAVSQVTPELVK"
BASE COUNT          191 a          138 c          149 g          178 t
ORIGIN      
        1 agatgaaaac tataaagaaa tatctattat ggttttaata tttgttgata aggatagtaa
       61 catgaacatg acaaaaggtg cactcatcct cagcctttca tttttgcttg ccgcatgtag
      121 ttcaattccg caaaatatca aaggcaataa ccaacctgat attcaaaaaa gttttgttgc
      181 tgttcataac cagccggggt tatatgttgg tcaacaagcg cgctttggtg ggaaggttat
      241 caacgttatc aatggcaaaa cggatacgtt gttagaaatc gctgtattac cgttggatag
      301 ctatgcgaag cctgatattg aagccaacta tcagggccga ctgctcgcca gacaaagcgg
      361 cttccttgat ccagtgaact atcgtaatca ctttgttacc atcctcggta ccattcaggg
      421 tgaacaacca ggctttatca ataaagtccc gtataacttc ctggaagtga atatgcaggg
      481 catccaggtg tggcatttga gagaagtggt taataccacc tataacctgt gggattacgg
      541 ctatggtgca ttctggccgg aaccgggctg gggtgcgcct tactacacca atgcggtgag
      601 tcaggtaaca cctgagctgg tcaaataaca ccaccgaaag atgcagatgc tttctc
//
LOCUS       DAPGWB010000413          655 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.422, whole genome shotgun sequence.
ACCESSION   DAPGWB010000413 DAPGWB010000000
VERSION     DAPGWB010000413.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.422"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            8..>655
                     /locus_tag="RHX79_004863"
     CDS             8..>655
                     /locus_tag="RHX79_004863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308264.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HDV2199909.1"
                     /translation="MSGKPAARQGDMTRKGLDIVQGSAGVLIGAPTGVACSVCPKKKD
                     SPNYGNPVNPVLGAKVLPGETDIALPGPLPFILSRAYSSYRTRTPAPVGVFGPGWKAP
                     FDIRLQIRDEGLILNDSGGRSIHFEPLFPGEISYSRSESLWLARGGVAAQHSSQPLSA
                     LWQVLPEDVRLSPHVYLATNSLQGPWWILSWPERVPGADEVLPPPPPAYRVLTGVV"
BASE COUNT          120 a          188 c          237 g          110 t
ORIGIN      
        1 agtgagaatg agcggaaaac cggcggcgcg gcagggcgac atgacccgca agggactgga
       61 tattgtgcag ggttcagcag gggtgctgat aggcgcgccg acgggggttg cctgctcggt
      121 gtgtcctaaa aaaaaggaca gtccaaatta tggcaacccg gtgaacccgg tgctgggtgc
      181 aaaggtgctg ccgggcgaga cggacattgc gctgcccggc ccgctgccgt tcatcctttc
      241 ccgcgcctac agcagttacc ggaccaggac gcccgcgccg gtaggggtgt ttggtcccgg
      301 ctggaaagcg cccttcgata tccgcttaca gatacgcgat gaaggcctga tactcaacga
      361 cagcggcggc aggagcattc actttgagcc gctgtttccc ggcgagataa gctacagccg
      421 cagcgagtca ctctggctgg cgcggggcgg agtagcggcg cagcacagtt cgcagccgct
      481 aagcgcgctc tggcaggtgc tgccggaaga tgttcgcctg agtccgcatg tgtacctggc
      541 gacaaacagc cttcaggggc cgtggtggat actcagctgg ccggagcggg tgccgggggc
      601 ggacgaggtg ctgccgcctc cgccgcccgc ataccgggtg ctgacggggg tggtg
//
LOCUS       DAPGWB010000414          655 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.423, whole genome shotgun sequence.
ACCESSION   DAPGWB010000414 DAPGWB010000000
VERSION     DAPGWB010000414.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.423"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..561)
                     /gene="fimE"
                     /locus_tag="RHX79_004864"
     CDS             complement(<1..561)
                     /gene="fimE"
                     /locus_tag="RHX79_004864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418733.1"
                     /note="upgraded from regulatory protein to switch DNA
                     invertase; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria switch DNA invertase FimE"
                     /protein_id="HDV2199910.1"
                     /translation="MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISE
                     LLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAI
                     FISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYL
                     GHRNIRHTVRYTASNAARFAGLWERNN"
BASE COUNT          195 a          168 c          135 g          157 t
ORIGIN      
        1 attatttctt tcccatagtc cggcaaaacg agcagcatta ctggcggtat aacgtacagt
       61 atggcgaata tttcgatgcc cgagataatc ctgaattaaa cgggtatcgg caccacgctc
      121 cgccagttca taaccacaag catgccttaa catatgagga tgagtctgcg ttacggttcc
      181 agcttcaata ccggcatcgc gaataatgcg ataggcctgc tggcgagaaa gccgactccc
      241 gcggcgagaa ataaatatag cgtcggtccg gtcagcgcct ttccagttag cacgttcctg
      301 ggtccagcgt tccacggctt cacgctcatc aaaacgtaac gggtgaacgg tagaaaatcc
      361 gttcttcagt cggcgaatat ttattcgacc ttcattaagg tcaagatcct gataatgcag
      421 atcaagcagt tcactaatac gcatcccatg ccgatatgcc aacagaataa gacaataatc
      481 tctggctccc gttgccccgt aacaaaccgc ctgcatcatg gcctgaactt ctttaccggt
      541 aagataacga cgtttactca caatagtagt actcctaact gagatatatt tgaatgaata
      601 cctataggaa acctcaatcg gtcaaaatta gcccaataga taaaaagata accac
//
LOCUS       DAPGWB010000415          651 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.424, whole genome shotgun sequence.
ACCESSION   DAPGWB010000415 DAPGWB010000000
VERSION     DAPGWB010000415.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.424"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>651
                     /locus_tag="RHX79_004865"
     CDS             <1..>651
                     /locus_tag="RHX79_004865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001001722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipopolysaccharide 1,2-glucosyltransferase"
                     /protein_id="HDV2199911.1"
                     /translation="LPTSQFWSYATYFRVLSFEYLSESISTLLYLDADVVCKGSLKPL
                     TEIIFKDEFAAVIPDNDSTQEACAKRLNIPEMNGRYFNAGVIYVNLKKWHEENLTPYL
                     LKLLRGETKYGSLKYLDQDALNIAFNMNNIYLGKDFDTIYTLKNELHDRSHRKFQQTI
                     TDKTVLIHYTGITKPWHSWAGYPSASYFNIAREQSPWKKYPLKEARTVAEMQKQYK"
BASE COUNT          208 a          123 c          131 g          189 t
ORIGIN      
        1 atctgccgac gtcacagttt tggtcgtacg cgacatactt cagggtattg tcttttgaat
       61 atctgagtga aagtatttcc acactgctgt atctggatgc cgatgttgtt tgtaaaggaa
      121 gcctgaaacc tctcacagaa attatattta aagatgagtt tgctgcggtc attcctgaca
      181 atgatagtac gcaggaggca tgtgcaaaac gcctcaacat tcccgaaatg aatggacgtt
      241 atttcaatgc aggcgttatc tatgtcaatc ttaaaaaatg gcatgaagaa aatttgacac
      301 cgtatttact caagctttta cgaggggaaa ctaaatatgg ctctcttaaa tatttagatc
      361 aggatgcgtt gaatatcgca tttaatatga ataatatcta cctcgggaag gattttgata
      421 ctatttatac cctgaaaaat gaacttcatg atcgtagtca tcgaaagttt cagcaaacca
      481 ttaccgataa aacagtattg attcactata cagggataac taaaccatgg catagctggg
      541 ctggatatcc gtctgcatca tactttaata tcgcgcgtga acaatctccc tggaagaaat
      601 atcctcttaa agaggcgcgg actgttgcag aaatgcagaa acaatataag c
//
LOCUS       DAPGWB010000416          643 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.425, whole genome shotgun sequence.
ACCESSION   DAPGWB010000416 DAPGWB010000000
VERSION     DAPGWB010000416.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.425"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            119..481
                     /locus_tag="RHX79_004866"
     CDS             119..481
                     /locus_tag="RHX79_004866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibL family ribosome-associated protein"
                     /protein_id="HDV2199912.1"
                     /translation="MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKAT
                     LEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTA
                     LGREMGLQEMTGFSKTAF"
BASE COUNT          189 a          149 c          154 g          151 t
ORIGIN      
        1 agtttttaag catgttaatg attacgttac agaactattg caatgtcatc agttgtgaac
       61 aaagcacctg gtcgcgcata ctaggggcta taaatttatc tttatcagaa gccatcacat
      121 gaaagaagtc gaaaaaaacg aaatcaaacg tctcagcgat cgtctggacg ccatccgcca
      181 ccagcaggcc gatctgtcgc tggttgaagc cgcagacaaa tatgccgagc tggaaaaaga
      241 gaaagccacg ctggaagcag aaattgctcg cctgcgtgaa gttcatagcc aaaaactgag
      301 taaagaagca cagaagctga tgaagatgcc gtttcagcgc gcaattacca aaaaagagca
      361 ggctgatatg ggcaagctga agaaaagtgt tcgcggactg gtggttgtgc acccaatgac
      421 cgcgctgggc cgtgaaatgg gcctgcagga gatgactgga ttctctaaga ctgcgtttta
      481 agcgcctcag acgactggtt cgatcatatc aacccgcatc tggcttgcct tagctggtca
      541 atgcggggac tctcctgtct actcgcctaa ttaccaaaca attcactccc tttacgtcga
      601 tttaccgctg gttgatattc tgaaaatgca tttttaccga aat
//
LOCUS       DAPGWB010000417          642 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.426, whole genome shotgun sequence.
ACCESSION   DAPGWB010000417 DAPGWB010000000
VERSION     DAPGWB010000417.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.426"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>642
                     /locus_tag="RHX79_004867"
     CDS             <1..>642
                     /locus_tag="RHX79_004867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDV2199913.1"
                     /translation="IKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP
                     RWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWG
                     PSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS
                     NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIK"
BASE COUNT          210 a          104 c          154 g          174 t
ORIGIN      
        1 ataaaagcca tacttatagc acaaagggca aatgaagaaa gcgagataaa gtcaagtcgg
       61 gttaaattat catggaagaa aaaacggcag gatgcactgg agtcaggcac gattatgacg
      121 gcgtcttgtc cgagatggct ctccttagat gacaaaagaa cggcttttgt tccagacccc
      181 gacagggtga aaactattga gctaattttt aaactcagga tggaaaggcg ctcattgaat
      241 gcaatagcca agtatttaaa tgatcatgct gtaaagaatt tctcaggaaa agaaagtgca
      301 tggggacctt ctgtaattga aaaattatta gcgaataaag ctctgatagg tatatgcgta
      361 ccttcatatc gtgcaagagg taaaggaata agtgaaatcg ctggctatta tcccagagtc
      421 atatcagatg atttgtttta cgctgtgcag gaaattcggt tggcaccttt tggtattagc
      481 aatagtagca aaaatcctat gttgataaat ctacttcgaa cagttatgaa gtgcgaggct
      541 tgtggtaata ccatgattgt tcatgcggta tctggaagtt tgcatggcta ttatgtttgt
      601 ccgatgagaa gactgcatcg atgtgacagg ccatcaataa ag
//
LOCUS       DAPGWB010000418          641 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.427, whole genome shotgun sequence.
ACCESSION   DAPGWB010000418 DAPGWB010000000
VERSION     DAPGWB010000418.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.427"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..185)
                     /locus_tag="RHX79_004868"
     CDS             complement(<1..185)
                     /locus_tag="RHX79_004868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001064255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199914.1"
                     /translation="MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLL
                     PYRDYNQESGLFMNDTT"
     gene            complement(345..566)
                     /gene="traR"
                     /locus_tag="RHX79_004869"
     CDS             complement(345..566)
                     /gene="traR"
                     /locus_tag="RHX79_004869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraR"
                     /protein_id="HDV2199915.1"
                     /translation="MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPI
                     PEARRKIFPGVTLCVECQAYQERQRKHYA"
BASE COUNT          155 a          160 c          141 g          185 t
ORIGIN      
        1 atcgtggtgt cattcatgaa cagaccggat tcctggttgt aatcacggta cggcagcaga
       61 cggctgaact gcgggaagct catttcgccc agaacttcat tggcctttgc ggattcgtca
      121 ggcagtttca gtgctgtgac gagggagtta accgcctgag tgacggcctc aagtgggtta
      181 ttcacatgaa ttccttagtt gaaaaataaa gcgagaaatg cggtagccat gaagggaata
      241 cctgtaatta acgcgccatt tcccggcgca tatacaaaga tttctgtttt ctgaatatcc
      301 actcatgttc atccggaatt aaatcactat gttctgcgac tgacttatgc ataatgtttt
      361 ctctgtcttt cctgatacgc ctgacattca acgcacaacg tcacaccggg aaatattttc
      421 cgccgggctt ccggaatagg atttccgcat gcttcacaga gataaacagg aataccatga
      481 gcatttattt tctggcgtat ccggtttatt cctgtcatgg tcagttgttc tgtcactgaa
      541 tatgcttcat cggcttcatc actcacggaa tattcctccc gacatgttct gacacgctac
      601 cgcccatccc ttttcacgca cagggcactc gttttacagg c
//
LOCUS       DAPGWB010000419          639 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.428, whole genome shotgun sequence.
ACCESSION   DAPGWB010000419 DAPGWB010000000
VERSION     DAPGWB010000419.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.428"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            6..>639
                     /locus_tag="RHX79_004870"
     CDS             6..>639
                     /locus_tag="RHX79_004870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000882472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199916.1"
                     /translation="MDFTPGIINTYHGDIYNCTTNTDNVKTPDTPKWPCDNWEEQQPI
                     NSIFSGEGYNPEQFDLAQQQLQQINACHTNTTYTNADYSKVVVQLVSLINNIETISST
                     PLTQQTQSILNQINNIRYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSVQT
                     MFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNMMKVFAGTNF"
BASE COUNT          256 a          129 c           94 g          160 t
ORIGIN      
        1 tgtcaattga ctttacccca ggtataataa atacatatca cggcgatatt tataactgca
       61 caacaaatac cgataatgtt aaaacgccag acacaccgaa gtggccttgt gataattggg
      121 aagaacaaca acccattaat tccatattct ctggagaagg atacaaccct gaacaatttg
      181 atttagcgca acaacaactc caacaaatta atgcatgcca cacgaacacc acatatacaa
      241 atgcagacta ctcaaaagtt gtggttcaac ttgtaagtct tattaataac attgaaacga
      301 taagttcgac accacttacg caacagacac aatcaatact taatcagatt aataacatta
      361 gatatgaaaa aaacaaaagt gctgaatgtc gaatcattgt tgtcgctaat cctaaacccg
      421 acaaggcaat cataactaaa attagcgtag aagagggaat acccataaca ttcagtgtcc
      481 aaaccatgtt ttcagatact aattttattg ctgaacaacg agctgactta ccaactaata
      541 taaaagatat tcaaagcctg tatcaaaaaa tgacgaagtt atatattgag cacagtgaaa
      601 ataaaaacat gatgaaagtc tttgccggaa ccaacttta
//
LOCUS       DAPGWB010000420          631 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.429, whole genome shotgun sequence.
ACCESSION   DAPGWB010000420 DAPGWB010000000
VERSION     DAPGWB010000420.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.429"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..543
                     /locus_tag="RHX79_004871"
     CDS             <1..543
                     /locus_tag="RHX79_004871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element IS621 family transposase"
                     /protein_id="HDV2199917.1"
                     /translation="QELNRTETAREVQRPSIDAHLLWLEAELKRLEKQIKDLTDDDPD
                     MKHRRKLLESIPGIGEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYESGSSVRGA
                     SRMSKAGHVSLRRALYMPAMVATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLAQVA
                     YGVLKSGVPFDASRHNPVAA"
BASE COUNT          162 a          147 c          206 g          116 t
ORIGIN      
        1 caggaactga atcgcactga aacggcgcgg gaagtccaga gaccgagcat tgatgctcac
       61 cttctgtggc ttgaagcaga gctgaagcgt cttgagaagc agataaaaga cctgacagac
      121 gatgatccgg atatgaaaca ccgcaggaaa ctgctggaaa gcatcccggg tatcggagag
      181 aaaacatctg cggtattgct ggcttatatc ggtctgaagg accgcttcgc ccatgccaga
      241 cagttcgccg cttttgcggg tctgacacca cggcgttatg aatcaggtag cagtgtgaga
      301 ggggcgagcc ggatgagtaa ggccggacat gtgtcgcttc gcagggcgtt gtatatgccc
      361 gcaatggtag ccaccagtaa gactgagtgg ggacgggcgt tccgcgaccg tctggcggct
      421 aatggcaaga aaggaaaggt gattctcggc gcgatgatgc gcaagctggc acaggtggcg
      481 tatggagtgc tgaagtcagg cgtgccgttc gatgcgtcac ggcataatcc ggtagcggcg
      541 taaaaatcgc ggaagggatg aaaaaaacag cgcctgacgg cgctgtgtct ggcatgcctg
      601 caatccggga aaccggacca ggaaaaaact t
//
LOCUS       DAPGWB010000421          630 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.430, whole genome shotgun sequence.
ACCESSION   DAPGWB010000421 DAPGWB010000000
VERSION     DAPGWB010000421.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.430"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
BASE COUNT          179 a          142 c          137 g          172 t
ORIGIN      
        1 agtgggctga ttagtccaaa agctgaagtt cttggtgctg aataaatcct gaatgaattt
       61 tccttgtagt ggtcaataaa aaccgaactc cattttattt tttatttctc tgcacacctc
      121 agtcagtttg atcagctgct gaaaaaactc agcgttgaag ccgctttcaa tgcagaaatg
      181 gcacaccatc tcgggtatga aaaaaatcag ccccgtatta ccgggacgga taactgcaag
      241 tatcccgcat aatcgtgcca ttcatattta gaaatcatcc ggcataatca atctgccaac
      301 gaaggagatc gctatgcgta cagcccgttt tactgagcat cagatcatcg ctgtgattaa
      361 gtcgattgaa gccggacgaa ttgttaaaga tgtttgctga cctgagcctg gagaaccgag
      421 tgctgaagga tgttatcgaa aaagctttaa aacaagcctg taagcgtgag ttggttactc
      481 atctgataac gacattcggg ctcagcatcc gtcaggcctg ccagagtttg aacctgagca
      541 gaacggctta ccattaccgc ccagatacca cgcgtgatga acccgttata aacggggcta
      601 tttatatgct taccttttgt gtattaccct
//
LOCUS       DAPGWB010000422          630 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.431, whole genome shotgun sequence.
ACCESSION   DAPGWB010000422 DAPGWB010000000
VERSION     DAPGWB010000422.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.431"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            177..271
                     /locus_tag="RHX79_004872"
     tRNA            177..271
                     /locus_tag="RHX79_004872"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:211..213,aa:Sec,seq:tca)
     gene            350..478
                     /locus_tag="RHX79_004873"
                     /pseudo
     CDS             350..478
                     /locus_tag="RHX79_004873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462654.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
BASE COUNT          151 a          157 c          144 g          178 t
ORIGIN      
        1 atcgtggtag cgttaattcc gctcatatat cattgtaaaa tatgggtttt atatgaacta
       61 taatgctttc gtgataatac gctgcgtgta ttaggcggaa aaaactgatc tgggggatgt
      121 agaaactcaa ggaagtagct ataatgcgcc ccgcctccat gtagcaatcg aggcgcggaa
      181 gatcgtcgtc tccggtgagg cggctggact tcaaatccag ttggggccgc cagcggtccc
      241 gggcaggttc gactcctgtg atcttccgcc aaaatgcctc tcctgacgtt ctccaacccc
      301 ttgtaatact gtcaatccag atattttcta ctgctcaata ttcaatcggc ttcaggaata
      361 cctggtctaa ggttttgtga tggacgatga gcggctgaag aatccgcctg tcggttcttc
      421 tgtcctcgaa cgcatccgcg atatgcgcgc cagcatgtgc cgtgtttatt tgcaggtgat
      481 ttgccccctg ctggctctca gccaactgta tcgccattaa ggtgaagatg ttgttttact
      541 cgccccagaa cacccttttt tatacgacta ttctattcct ttaacagctg gcgaaaaaaa
      601 ctgacctata aacttcacca ataatcagac
//
LOCUS       DAPGWB010000423          628 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.432, whole genome shotgun sequence.
ACCESSION   DAPGWB010000423 DAPGWB010000000
VERSION     DAPGWB010000423.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.432"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            5..>628
                     /locus_tag="RHX79_004874"
     CDS             5..>628
                     /locus_tag="RHX79_004874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HDV2199918.1"
                     /translation="MYLTDNIIKLSNKIGQRVYTVVSEMSIEAWITKEPQPFVYRRSG
                     AYQKLTIGSDWGQLFDCAWMRVYGKRPADKFRHKLVALVDIGGEGLIVDKNGSPICGI
                     TNKASSYGVPPDKPGKWVVDLSLVSENDEVEFWIDAACNDLFGYVTNGGIITDVHIAT
                     CNQLLKSLYYDVEVLFDWINDGQKFESIHPKGIIPEKIITKRSERTDE"
BASE COUNT          181 a          119 c          141 g          187 t
ORIGIN      
        1 ttctatgtac cttactgata atattatcaa actgtcgaat aaaataggtc agcgtgttta
       61 tactgttgtc tctgaaatgt cgattgaagc atggataaca aaagaaccgc agccttttgt
      121 ttatcgccgt agcggcgctt accagaaact caccattggc tcagactggg gtcaactgtt
      181 tgactgtgcc tggatgcgag tttatggtaa acgtccagca gataaattta gacacaaact
      241 cgtcgctctc gttgatatcg gtggcgaagg tcttattgtg gataagaatg gttcacccat
      301 ctgcggcatc acgaataaag catcatctta tggcgtaccg ccagataaac caggtaaatg
      361 ggtggttgac ctttctctcg ttagtgaaaa tgacgaggtc gagttttgga ttgatgctgc
      421 gtgcaacgat ttatttggct atgtcactaa tggagggatt attactgatg ttcatatcgc
      481 gacatgtaat caactactga aatcccttta ttatgatgtt gaagtgcttt tcgactggat
      541 taatgatggt cagaagtttg aatccataca tcctaaaggt attatcccag aaaaaattat
      601 caccaaaaga agcgagcgta ctgacgaa
//
LOCUS       DAPGWB010000424          607 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.434, whole genome shotgun sequence.
ACCESSION   DAPGWB010000424 DAPGWB010000000
VERSION     DAPGWB010000424.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.434"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>607
                     /locus_tag="RHX79_004875"
     CDS             <1..>607
                     /locus_tag="RHX79_004875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CatB-related O-acetyltransferase"
                     /protein_id="HDV2199919.1"
                     /translation="EYSTMPVKNFSSVGAFSFPTCHFSGNIRIGRFCSIASNVKIMGG
                     NHPLNRFTTHMMTYNGEFDKFAMSEFERSWTLKPFITKPENPIIGNDVWIGNDVVLKG
                     GIAIGDGAVIAANSVVTKDVPPYAIVAGVPAKIIRFRFDSNVIDELLRIKWWNYNYSD
                     LPDNNKCDDINYFVEEMNRLISDGNIQERDYKKFNLSEVFRG"
BASE COUNT          196 a           87 c          128 g          196 t
ORIGIN      
        1 agaatattca acaatgcctg tgaaaaattt ctccagtgtc ggcgcttttt catttccgac
       61 ctgccatttt tcagggaata tacgtatagg tcgattttgt agtattgcat caaatgtaaa
      121 aataatgggt ggaaatcatc ctttgaatcg ttttactact cacatgatga cttataacgg
      181 tgaatttgat aagtttgcta tgagtgaatt tgaacgtagc tggacattga aaccattcat
      241 taccaaacct gaaaatccga ttataggaaa tgatgtctgg ataggaaatg atgttgtatt
      301 gaaaggtggc atcgcaatag gtgatggtgc tgttattgct gccaattccg ttgttaccaa
      361 agatgtgccc ccatatgcca tagttgcagg agttcctgca aaaataatca gatttaggtt
      421 tgattcaaat gttattgatg aactgttgag aataaaatgg tggaattata actactcaga
      481 tcttccggat aataacaagt gtgatgatat aaattatttt gttgaagaga tgaatcgatt
      541 gatatcagat ggaaatattc aagagaggga ctataaaaaa ttcaatcttt ctgaggtatt
      601 cagaggc
//
LOCUS       DAPGWB010000425          607 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.435, whole genome shotgun sequence.
ACCESSION   DAPGWB010000425 DAPGWB010000000
VERSION     DAPGWB010000425.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.435"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..312
                     /locus_tag="RHX79_004876"
     CDS             <1..312
                     /locus_tag="RHX79_004876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000038462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDV2199920.1"
                     /translation="IYIGKMSIVNPDTKIADCAVINTRSLIEHGNCVGCCSNISTNVV
                     LNGDVKVDELTFIGSSSVINGQLLIGKNSIIGSGSVVIRNVPDNVVVVGAPAKIIKER
                     K"
     gene            312..>607
                     /locus_tag="RHX79_004877"
     CDS             312..>607
                     /locus_tag="RHX79_004877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015870679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase family protein"
                     /protein_id="HDV2199921.1"
                     /translation="MEKVYIVAEIGCNHNGDFSIAKKMVSEAKMAGVDAVKFQTFKAE
                     LLISKYAPKAEYQKKVTDADESQLDMTKKLELPHDRYIELENYARSLGLDVFSTP"
BASE COUNT          211 a           79 c          123 g          194 t
ORIGIN      
        1 atttatatag gaaaaatgag tatagttaat ccagacacta aaattgcaga ttgtgctgta
       61 attaatacac gatcgctaat cgaacacggt aattgcgttg gctgttgtag taatatttct
      121 acaaatgtgg tcctaaatgg tgatgtaaaa gttgatgaac ttacatttat tggaagtagc
      181 agtgttatca atgggcaact tctaattgga aagaatagta ttattggctc aggatctgtt
      241 gttattagaa atgtaccgga taatgttgta gttgttggag ctcctgctaa aataattaaa
      301 gagcgtaaat aatggaaaaa gtatatatcg ttgcggaaat tggctgtaac cataatggtg
      361 atttttcaat tgctaaaaaa atggtaagtg aagctaaaat ggctggtgtt gatgctgtaa
      421 aatttcaaac atttaaggcc gaactcctca tttcaaaata tgcacccaaa gcagaatatc
      481 aaaaaaaggt tactgatgct gatgaatctc aacttgatat gactaaaaaa ttagaattac
      541 cacatgatag gtatattgaa cttgagaact atgctcgatc tttagggtta gatgtttttt
      601 cgactcc
//
LOCUS       DAPGWB010000426          590 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.437, whole genome shotgun sequence.
ACCESSION   DAPGWB010000426 DAPGWB010000000
VERSION     DAPGWB010000426.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.437"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            20..>590
                     /locus_tag="RHX79_004878"
     CDS             20..>590
                     /locus_tag="RHX79_004878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001333619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
                     /protein_id="HDV2199922.1"
                     /translation="MHQPYRLPGQQYDKESGLYYNRNRYYDPLQGRYITQDPIGLEGG
                     WSLYAYPLNPVNGIDPLGLSPADVALMRKKEQLNHQRAWDILSDTYDDMKRLNLGGTD
                     QFFHCMAFCRVSKLNDAGVSRSAKGLGYEKEIRDYGLNMFGMYGRKVKLSHSEMIEDN
                     KKDLAVNEHGLTCPLTQDCSNRCIDYINPE"
BASE COUNT          184 a           97 c          156 g          153 t
ORIGIN      
        1 tgaagagaac ccgcatcacc tgcaccagcc gtaccggctg ccggggcagc agtatgataa
       61 ggagtcgggg ctgtactaca accggaaccg gtactacgat ccgttgcagg ggcggtatat
      121 cactcaggac ccgatagggc tggagggggg atggagtctg tatgcgtatc cgctgaatcc
      181 ggtgaatggt attgatccat tagggttaag tcctgcagat gtagcgttaa tgcgaaaaaa
      241 agaacaacta aaccatcaaa gagcatggga tatattatct gatacttatg atgatatgaa
      301 gagattaaat ttaggtggga ctgatcaatt tttccattgt atggcatttt gtcgagtgtc
      361 taaattaaat gacgctggtg ttagccgatc agcgaaaggg ctgggttatg aaaaagagat
      421 tagagattac gggttaaata tgttcggtat gtacggcaga aaagtaaagt tatcccattc
      481 tgagatgatt gaagataata aaaaagactt ggctgtaaat gaacatgggt tgacatgtcc
      541 attaacacaa gattgctcaa atagatgtat tgattatatt aatccagagc
//
LOCUS       DAPGWB010000427          584 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.438, whole genome shotgun sequence.
ACCESSION   DAPGWB010000427 DAPGWB010000000
VERSION     DAPGWB010000427.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.438"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..584
                     /locus_tag="RHX79_004879"
                     /pseudo
     CDS             1..584
                     /locus_tag="RHX79_004879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313048.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SopA family protein"
BASE COUNT          194 a           82 c          110 g          198 t
ORIGIN      
        1 ataagtgtaa aattctacag aaatgaaaaa aattgaatgc gcttgcaatt ttctgatgga
       61 taaagatgcg caggggtata tcgacctgtc tgatttggat ttaacaagtt gtcattttaa
      121 aggtgacgtt atatcgaagg tgtctttttt atcatcaaat ctacaacatg taacattcga
      181 atgtaaagaa attggggatt gcaattttac tactgcaata gttgataatg tcatatttag
      241 atgtcgacgt ttacacaatg tgatttttat caaagcgagt ggtgaatgtg tcgatttcag
      301 caaaaatatt cttgatacag ttgacttctc gcagagtcaa cttactcaga gtaattttcg
      361 cgaatatcag attagaaatt caaacttcga taattgttat ctttacgctt cgcacttcac
      421 cagagcagag tttctgtctg ccaaagaaat atcatttatt aaatcgaata tgacagctgt
      481 tatgtttgat catgtgcgaa tatcgacagg gaattttaaa gattgcatta cagaacaatt
      541 ggaattaact attgattatt cagatatatt tgggaatgaa gatc
//
LOCUS       DAPGWB010000428          576 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.439, whole genome shotgun sequence.
ACCESSION   DAPGWB010000428 DAPGWB010000000
VERSION     DAPGWB010000428.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.439"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            66..287
                     /gene="traR"
                     /locus_tag="RHX79_004880"
     CDS             66..287
                     /gene="traR"
                     /locus_tag="RHX79_004880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraR"
                     /protein_id="HDV2199923.1"
                     /translation="MSDEADEAYSVTEQLTMTGINRIRQEINVHGIPVYLCEACGNPI
                     PEARRKIFPGVTLCVECQAYQERQRKHYA"
     gene            280..>576
                     /locus_tag="RHX79_004881"
     CDS             280..>576
                     /locus_tag="RHX79_004881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000549587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199924.1"
                     /translation="MHKSENEKIDFILDEHERISRKQGSLCMALGKGFLVIAILCGVA
                     TFCVSGLYLKSLCLSVACCCGVFSRIFNYYSVPEESRMVLSRQELLRLMRLTEDV"
BASE COUNT          153 a          105 c          157 g          161 t
ORIGIN      
        1 cgagtgccct gtgcgtgaaa agggatgggc ggtagcgtgt cagaacatgt cgggaggaat
       61 attccgtgag tgatgaagcc gatgaagcat attcagtgac agaacaactg accatgacag
      121 gaataaaccg gatacgccag gaaataaatg ttcatggtat tcctgtttat ctctgtgaag
      181 catgcggaaa tcctattccg gaagcccggc ggaaaatatt tcccggtgtg acgttgtgcg
      241 ttgaatgtca ggcgtatcag gaaaggcaga ggaaacacta tgcataaatc agaaaatgaa
      301 aaaatagatt ttattctgga tgagcatgag cggatatcca gaaaacaggg ttctttgtgt
      361 atggcactgg gtaagggatt tttagttata gctattcttt gtggtgttgc cacattctgt
      421 gtttctggcc tgtatctgaa atccctgtgc ctgtccgttg cctgctgttg tggggtattc
      481 agtcgtattt ttaattatta cagcgtaccg gaggaatcac gcatggtact cagtcgtcag
      541 gaattactcc ggcttatgcg tctgactgaa gacgta
//
LOCUS       DAPGWB010000429          574 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.440, whole genome shotgun sequence.
ACCESSION   DAPGWB010000429 DAPGWB010000000
VERSION     DAPGWB010000429.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.440"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>574
                     /locus_tag="RHX79_004882"
     CDS             <1..>574
                     /locus_tag="RHX79_004882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199925.1"
                     /translation="DNQEPIELPANYKDKELVRTIINDNIVEKTHDINNKEMIFSALK
                     EIYDGDPGFIFDKISHKLRHTVTEFDESGNSEPTDLFTWYGKDKKGDSLAIVIKNKNG
                     NDYLSLGYYDQDDYHIQRGIRINGDSLTQYCSENARSASAWFESSKAIMAESFATGSD
                     HQVVNELNGERLREPNEVFKRLGRAIRYNFQ"
BASE COUNT          213 a          103 c          117 g          141 t
ORIGIN      
        1 gacaaccaag aaccaataga attacctgcg aactataaag acaaagaact cgtccgtact
       61 atcattaatg acaacatagt tgagaagact catgatatca ataacaagga aatgatcttc
      121 agcgcattaa aagaaatata tgatggagat cctggtttta tcttcgataa gatatcacac
      181 aaactcagac atacggtaac ggaatttgat gagagcggga atagcgaacc aacggactta
      241 tttacctggt acggtaaaga taaaaaaggc gactctctcg ctattgtaat taaaaataaa
      301 aacggaaatg attacttatc tctcggttac tacgatcagg acgactacca cattcaaaga
      361 ggaattcgta ttaatggtga tagtctcacc caatattgta gtgaaaacgc caggagtgct
      421 tcagcgtggt ttgaaagcag caaagctatc atggcagaat catttgcaac aggttccgat
      481 catcaggttg taaacgagct caacggggaa agactgagag aacctaacga agtttttaaa
      541 cgtttaggtc gagcaataag atataatttt caag
//
LOCUS       DAPGWB010000430          567 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.441, whole genome shotgun sequence.
ACCESSION   DAPGWB010000430 DAPGWB010000000
VERSION     DAPGWB010000430.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.441"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            111..>567
                     /gene="traS"
                     /locus_tag="RHX79_004883"
     CDS             111..>567
                     /gene="traS"
                     /locus_tag="RHX79_004883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000632670.1"
                     /note="TraS, as the term is used in F-like plasmids, is a
                     plasmid entry exclusion protein. It interacts with the
                     F-like plasmid mating stabilization protein TraG; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer entry exclusion protein TraS"
                     /protein_id="HDV2199926.1"
                     /translation="MITQQIISSELEVLKKHIDSGDIRIPSLWQGLKPGLIIMGWMIF
                     CPLLMSFLITQKTSETLTAVLAGGWLGLIILFIVARIRMLYFSLPEEFLKTSSVMRVI
                     SSKLKVYFIVYMGVIFLWSFLGGGIIYGFGAILVTVIMAFLIQLDIGRYQ"
BASE COUNT          174 a           79 c          130 g          184 t
ORIGIN      
        1 gctcaggaaa gaatacctgg tgctgatagt ccgaaagagc ttttagagaa agcaaagagt
       61 taccagcata aaaaataatc ataacatgtt gggtagggta tggagagacc atgattacac
      121 aacaaattat cagtagtgag ttggaagttt taaagaaaca tattgactca ggagatatta
      181 gaattccgtc actatggcag ggattaaaac ccgggcttat catcatgggg tggatgattt
      241 tttgtccctt gctaatgtca tttctaataa cacaaaagac aagtgaaaca ctcactgctg
      301 tgttagccgg aggatggctt ggacttatta ttctgtttat tgtggcaagg attagaatgt
      361 tatatttctc tctgccggaa gaattcctaa agacatcatc cgtaatgagg gttatatcat
      421 caaaacttaa agtgtatttc attgtgtata tgggggttat atttttatgg tcttttttag
      481 gtggagggat tatatacggt tttggcgcaa ttttagtgac ggttattatg gcgttcttga
      541 ttcaattaga tatcggtaga tatcaat
//
LOCUS       DAPGWB010000431          567 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.442, whole genome shotgun sequence.
ACCESSION   DAPGWB010000431 DAPGWB010000000
VERSION     DAPGWB010000431.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.442"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..230)
                     /locus_tag="RHX79_004884"
     CDS             complement(<1..230)
                     /locus_tag="RHX79_004884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YmgA"
                     /protein_id="HDV2199927.1"
                     /translation="MKTSDNERIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAE
                     EDAFRRDLIDSIIRDFSNSDSGGPNRRTATAD"
     gene            complement(273..509)
                     /locus_tag="RHX79_004885"
     CDS             complement(273..509)
                     /locus_tag="RHX79_004885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YcgZ"
                     /protein_id="HDV2199928.1"
                     /translation="MHQNSVTSDSAGAITRYFAKANLPTQQETLGEIVTEILKDGRNL
                     SRKSLCAKLLCRLEQATGEEEQKHYNALIGLLFE"
BASE COUNT          157 a          125 c          104 g          181 t
ORIGIN      
        1 ttgtcagctg tcgctgttct tcggtttggc cctcctgaat cactattgct aaaatcacga
       61 attatgctgt caattaaatc gcgtcggaaa gcatcttcct cagccgattt cattacgagt
      121 aattgcttaa taagagtctg caatgaaaaa tttatcttca tgcgcagtat ctggagcacc
      181 gcctggccag taatttcata ttttatacgt tcattatcag atgtcttcat aacgacttca
      241 tagctaacct gttaaataat caggctgttg cattattcaa aaagcaaccc aattagtgca
      301 ttataatgtt tctgttcctc ttcccctgtc gcttgttcca gtcggcaaag aagtttggca
      361 caaagcgact ttcgactcag attacgtcca tctttcaaaa tctcagtcac aatttccccg
      421 agagtttcct gctgagtagg caagttagct tttgcaaagt aacgagtgat tgctcccgca
      481 gaatctgaag tcactgaatt ttgatgcatg ctacgcctct gttaaaaatg ttaatcaatg
      541 tgaagtgagg taacaatagc aaacttg
//
LOCUS       DAPGWB010000432          541 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.443, whole genome shotgun sequence.
ACCESSION   DAPGWB010000432 DAPGWB010000000
VERSION     DAPGWB010000432.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 541)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.443"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            6..512
                     /locus_tag="RHX79_004886"
     CDS             6..512
                     /locus_tag="RHX79_004886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001035653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDV2199929.1"
                     /translation="MTCISQPKKTTLRDKAMVNYAFDYLSSPGSLPLTTAATELSAIH
                     GHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKP
                     DTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLAAKQHYKNAER
                     LLAGLPAH"
BASE COUNT          171 a          125 c          119 g          126 t
ORIGIN      
        1 cagcaattac ctgtattagc caacccaaga aaacaacgtt gcgtgataaa gccatggtga
       61 attatgcctt tgattattta agctcaccag gcagtctacc gttaaccacg gcagccacgg
      121 agctttccgc gattcatggt cactcaacat cgcaatatcg ccttggcgaa ttttatcttc
      181 atggtagcga cggtaaacca ctggattata cacaggcgag atactggtat gagcaatcag
      241 cggaacagga aaatccacgc gcgcaaagta aactggggtg gatctacctc aaaggtctgg
      301 gggtcaaacc cgacacccgt aaagcaattc tctggtataa ggaagcagct gaacaagggt
      361 atgctcatgc tcaatatact ttaggtttga tctacagaaa tggctcaggt attaatgtta
      421 accattatga atctcaaaaa tggttaaaac tggccgccaa acaacattac aaaaatgcgg
      481 aaagattact tgccgggctt cccgcacatt aacgtcgact gtcaaccgaa cagatggagt
      541 a
//
LOCUS       DAPGWB010000433          539 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.444, whole genome shotgun sequence.
ACCESSION   DAPGWB010000433 DAPGWB010000000
VERSION     DAPGWB010000433.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.444"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..539
                     /locus_tag="RHX79_004887"
     rRNA            <1..539
                     /locus_tag="RHX79_004887"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          133 a          128 c          162 g          116 t
ORIGIN      
        1 gaagttttca gagatgagaa tgtgccttcg ggaaccgtga gacaggtgct gcatggctgt
       61 cgtcagctcg tgttgtgaaa tgttgggtta agtcccgcaa cgagcgcaac ccttatcctt
      121 tgttgccagc ggtccggccg ggaactcaaa ggagactgcc agtgataaac tggaggaagg
      181 tggggatgac gtcaagtcat catggccctt acgaccaggg ctacacacgt gctacaatgg
      241 cgcatacaaa gagaagcgac ctcgcgagag caagcggacc tcataaagtg cgtcgtagtc
      301 cggattggag tctgcaactc gactccatga agtcggaatc gctagtaatc gtggatcaga
      361 atgccacggt gaatacgttc ccgggccttg tacacaccgc ccgtcacacc atgggagtgg
      421 gttgcaaaag aagtaggtag cttaaccttc gggagggcgc ttaccacttt gtgattcatg
      481 actggggtga agtcgtaaca aggtaaccgt aggggaacct gcggttggat cacctcctt
//
LOCUS       DAPGWB010000434          536 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.445, whole genome shotgun sequence.
ACCESSION   DAPGWB010000434 DAPGWB010000000
VERSION     DAPGWB010000434.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.445"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            69..530
                     /locus_tag="RHX79_004888"
     CDS             69..530
                     /locus_tag="RHX79_004888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010349363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199930.1"
                     /translation="MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITG
                     LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK
                     AVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR"
BASE COUNT          200 a           91 c           97 g          148 t
ORIGIN      
        1 gattacaaaa taaaagtgat atacagacgc taaaaacaga atgttattgc cttctagcgg
       61 aatgccatat gtctttggca cttcatggaa aaagtgaact tgaacttgct gctcaaaaag
      121 cattagagct tttagattat gtatcagaca taaccactgt cgatggaaaa attttagcta
      181 ttatgggact gataactggt ctgtctggac aagcaaaagt atctcatatc ttatttgaac
      241 aggctaagat acactcaact gatatagcct ctctctacta ctatagggca ctagtccact
      301 ttcataatga aaaaattgaa gaggcaagga tttgtataga caaatcacta caactcgaac
      361 ccagaagacg aaaagcagtt gtgataaaag aatgtgtaga tatgtatgtg cctaacccgc
      421 tcaaaaacaa cattaaactc tactataaag aaactgagag tgaaagccat cgagttataa
      481 ttgacaacat tttgaaatta aagcagctga cgagaatttg tatgcgataa attttt
//
LOCUS       DAPGWB010000435          535 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.446, whole genome shotgun sequence.
ACCESSION   DAPGWB010000435 DAPGWB010000000
VERSION     DAPGWB010000435.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.446"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            183..>535
                     /locus_tag="RHX79_004889"
     CDS             183..>535
                     /locus_tag="RHX79_004889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HDV2199931.1"
                     /translation="MEHELHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELV
                     SWLKGHKIDHAHICIEATGTYMEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTD
                     TVDARMLAEFCRQKRP"
BASE COUNT          129 a          132 c          139 g          135 t
ORIGIN      
        1 cctccagtgc agagaaaatc ggccagtttt ctctgcctgc agtccgcatg ccgtatcggg
       61 ccttgggttc taacctgttg cgtagattta tgcagcggac tgcctttctc ccaaagtgat
      121 aaaccggaca gtatcatgga ccggttttcc cggtaatccg tatttgcaag gttggtttca
      181 ctatggaaca tgaacttcat tatatcggta tcgacaccgc taaagagaaa ctggatgtcg
      241 atgtgttgcg tcctgatggt cgtcatcgca ccaaaaaatt cgctaacacc actaaagggc
      301 acgatgagct ggtgagctgg ctgaaaggtc acaagattga ccatgcgcat atctgcatcg
      361 aagcgaccgg cacctatatg gaacctgtcg ctgagtgcct ttacgatgct ggctacatag
      421 tgtcagtcat taatcctgcg ctgggtaaag ctttcgctca gagtgaagga ctgcgtaaca
      481 agactgatac cgtggatgcg cgcatgctgg cagagttctg tcgtcagaag cgccc
//
LOCUS       DAPGWB010000436          527 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.447, whole genome shotgun sequence.
ACCESSION   DAPGWB010000436 DAPGWB010000000
VERSION     DAPGWB010000436.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.447"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>527
                     /gene="tuf"
                     /locus_tag="RHX79_004890"
     CDS             <1..>527
                     /gene="tuf"
                     /locus_tag="RHX79_004890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDV2199932.1"
                     /translation="IDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKE
                     TQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESE
                     VYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHP
                     IAMDDGLRFAIREGGR"
BASE COUNT          128 a          130 c          146 g          123 t
ORIGIN      
        1 attgacaagc cgttcctgct gccgatcgaa gacgtattct ccatctccgg tcgtggtacc
       61 gttgttaccg gtcgtgtaga acgcggtatc atcaaagttg gtgaagaagt tgaaatcgtt
      121 ggtatcaaag agactcagaa gtctacctgt actggcgttg aaatgttccg caaactgctg
      181 gacgaaggcc gtgctggtga gaacgtaggt gttctgctgc gtggtatcaa acgtgaagaa
      241 atcgaacgtg gtcaggtact ggctaagccg ggcaccatca agccgcacac caagttcgaa
      301 tctgaagtgt acattctgtc caaagatgaa ggcggccgtc atactccgtt cttcaaaggc
      361 taccgtccgc agttctactt ccgtactact gacgtgactg gtaccatcga actgccggaa
      421 ggcgtagaga tggtaatgcc gggcgacaac atcaaaatgg ttgttaccct gatccacccg
      481 atcgcgatgg acgacggtct gcgtttcgca atccgtgaag gcggccg
//
LOCUS       DAPGWB010000437          520 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.448, whole genome shotgun sequence.
ACCESSION   DAPGWB010000437 DAPGWB010000000
VERSION     DAPGWB010000437.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.448"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..462
                     /locus_tag="RHX79_004891"
     CDS             <1..462
                     /locus_tag="RHX79_004891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004389801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HDV2199933.1"
                     /translation="LGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQA
                     LTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGL
                     IRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD"
BASE COUNT          168 a          117 c          114 g          121 t
ORIGIN      
        1 ctggggcatt gggagggcga tttagtctca ggtacaaaaa actctcatat agccacactt
       61 gtagaccgaa aatcacgtta tacgatcatc cttagactca ggggcaaaga ttctgtctca
      121 gtaaatcagg ctcttaccga caaattcctg agtttaccgt cagaactcag aaaatcactg
      181 acatgggaca gaggaatgga actggccaga catctagaat ttactgtcag caccggcgtt
      241 aaagtttact tctgcgatcc tcagagtcct tggcagcggg gaacaaatga gaacacaaat
      301 gggctaattc ggcagtactt tcctaaaaag acatgtcttg cccaatatac tcaacatgaa
      361 ctagatctgg ttgctgctca gctaaacaac agaccgagaa agacactgaa gttcaaaaca
      421 ccgaaagaga taattgaaag gggtgttgca ttgacagatt gaatctacaa ccgcgctctt
      481 gatgtcagac tccctgaaca gttctcgata atcgggaaac
//
LOCUS       DAPGWB010000438          514 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.449, whole genome shotgun sequence.
ACCESSION   DAPGWB010000438 DAPGWB010000000
VERSION     DAPGWB010000438.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.449"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
BASE COUNT          147 a           88 c          118 g          161 t
ORIGIN      
        1 tgcaagctaa ctcagtgagc ttggtgaaaa tcagtgttta cccgccatca ggctgagcat
       61 aattctcatc atgaaatatg tttcctggtt tgtggcttgt aactggtcac ttctgaagtc
      121 gatctggaga ggcttgttga tgttggtgtt ttcaggatga tgtttcactt agtttgtttg
      181 ccgtatcgcc cggcgaatgg ctgtgattga ggaaggttta agtcgtagtg accaaagcta
      241 tatttaccaa cgaatgtaga tgaaaaaatc atctcctgcg tttccccata tctccaggat
      301 aaaaaggaat gtaacaatct catggcgtaa gctgacgaat cagcaggaat aatcgctagg
      361 gacctaagaa ttagcatgat aatagccact aagaaattac tgcgctccat gaaatagcca
      421 ttttgtggca aatggagttg actaataatg tcatatgtga gacggctagt tgaacgaata
      481 ttaaattttg ctgaattttt tatgttgatt ttac
//
LOCUS       DAPGWB010000439          508 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.450, whole genome shotgun sequence.
ACCESSION   DAPGWB010000439 DAPGWB010000000
VERSION     DAPGWB010000439.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.450"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..96
                     /locus_tag="RHX79_004892"
     CDS             <1..96
                     /locus_tag="RHX79_004892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HDV2199934.1"
                     /translation="FNYIECDYNRWRRHSWCGGLSPEQFENKNLA"
     gene            127..508
                     /locus_tag="RHX79_004893"
                     /pseudo
     CDS             127..508
                     /locus_tag="RHX79_004893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026224.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4329 domain-containing protein"
BASE COUNT          155 a           96 c          120 g          137 t
ORIGIN      
        1 tttaattata tcgaatgtga ttacaatcgg tggcggcggc acagttggtg tggcggcctc
       61 agtccggaac aatttgaaaa caagaacctc gcttaggcct gtgtccatat tacgtgggta
      121 ggatcatgga acctgtatgg atatcaattg aatccgatat cagacatcga ccccctgggt
      181 ttatctatgt gggaggatgc aaaatcgggg gcatgtacta atggtctttg cggcacacta
      241 tccgctatga caggtccaga taaatttgat tctatagata gcaccgcata tgacgcctta
      301 aataaaataa atagccaatc tatttgcgaa gataaagagt tcgctggttt aatatgtaag
      361 gataatagtg gcagatattt ctcaacagca cctaaccgag gagaatgaaa aggatcatat
      421 ccattcaata gcccttgccc taatggtact gagaaagtat cagcttatca tactcatggt
      481 gcagatagtc atggagaata ttgggacg
//
LOCUS       DAPGWB010000440          505 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.451, whole genome shotgun sequence.
ACCESSION   DAPGWB010000440 DAPGWB010000000
VERSION     DAPGWB010000440.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.451"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(20..>505)
                     /locus_tag="RHX79_004894"
     CDS             complement(20..>505)
                     /locus_tag="RHX79_004894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000961353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199935.1"
                     /translation="FPEVKLCGENLETVFKYKNGDDVREIAKINITLQKEEDGLYNLG
                     GLDFKGCFFSGQNFSNYDIQYVNWGTSLFDLDTPCIFNAPAYNKSNEKSLKPVSENGL
                     SGVLTDRNNKIKLITGVAPFDDILFMDDDFDDSSSEDDPVENSPVVTSPVVSSSKSSF
                     Q"
BASE COUNT          164 a          108 c           73 g          160 t
ORIGIN      
        1 aaaaatagcc atttattaat cattgaaaac tgcttttaga acttgataca acgggactag
       61 tcacaacagg actattctca acgggatcat cctcagagga actatcatca aagtcatcat
      121 ccataaataa aatatcatcg aatggtgcca cgcccgtgat gagttttatt ttattattac
      181 gatcagtcaa gactccactt aaaccgtttt cgctcacagg ttttaatgat ttttcattac
      241 tcttgttgta agcaggcgca ttaaaaatac acggagtatc aagatcaaac aatgacgttc
      301 cccagttcac atattgaata tcatagttac tgaagttctg tccagaaaag aagcatccct
      361 taaaatccaa tccacctaaa ttatataaac catcctcttc tttttggaga gtaatgttaa
      421 ttttggctat ctcccggaca tcatcgccat ttttatattt gaataccgtt tcaagatttt
      481 ccccacacag tttgacttct ggaaa
//
LOCUS       DAPGWB010000441          490 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.452, whole genome shotgun sequence.
ACCESSION   DAPGWB010000441 DAPGWB010000000
VERSION     DAPGWB010000441.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.452"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            382..490
                     /locus_tag="RHX79_004895"
                     /pseudo
     CDS             382..490
                     /locus_tag="RHX79_004895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          131 a          120 c           86 g          153 t
ORIGIN      
        1 attttttaag ttccatttgt tcaccttatt tatgtaagga gtatttgatc atgtataagc
       61 aataaaaaac agcttcaggt aatgaggaat atctcaattt ttaaacataa aatgcgaatt
      121 atttagtaca aaaagtgaac ttttgatgat ctttccctaa tctcacatag gatcagatct
      181 cgtctgatcg ttccccctgc gctcactacc atggctcttt accacagcag ccggggttgt
      241 ttgggaccga cttccgacag cagatcccgg tgggcctgcc accatctctt cacaagctta
      301 tgcttattac atgcaaaacg tcccgttttg catctttgtg cctacggcac accgatgatc
      361 tttccctgtg atctttccct gaatctgccc ctgagaacct gaatcaaacg tctgactcgc
      421 agaaccatct gtttctcgcg ctctgtagaa cttcatgaaa aagtcatcgg tgcttttatc
      481 gaaaaataca
//
LOCUS       DAPGWB010000442          468 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.454, whole genome shotgun sequence.
ACCESSION   DAPGWB010000442 DAPGWB010000000
VERSION     DAPGWB010000442.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.454"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..>468)
                     /locus_tag="RHX79_004896"
     CDS             complement(<1..>468)
                     /locus_tag="RHX79_004896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RHS element protein"
                     /protein_id="HDV2199936.1"
                     /translation="AALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVL
                     PAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAGRHFRLVLTTQAQRAE
                     EARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPL"
BASE COUNT           77 a          162 c          150 g           79 t
ORIGIN      
        1 agcggcgcgg caggtaaatt ctccgggtat tccgggtcgt gcgtcagcca cacggcagac
       61 agacggatgc cgttgtcccg gccatattcg gtgtaacccg gcagggtatc aggaaaagcg
      121 gacggttccg tcccgccgga aatggcctgc tgccgggctt cttctgcccg ctgcgcctgc
      181 gtggtcagta ccagccggaa gtgacgcccg gcaccatccg tcacgccggt gatttcgccg
      241 ctgaattcac cggcggcttc gcggtggaac gtctgtgtgc gcccgaagcg gtccaccagc
      301 ccggtcagta cccggtacgg cggcagcggc gcaggcagca cctcatccgc ttccggcacc
      361 cgctcacacc agccgagcag ccaccacggc ccctgcggac tgtttgtcgc cagataacga
      421 tgcggactta agcggagttc ttccggcagc gcctgccaga gtgcggcc
//
LOCUS       DAPGWB010000443          465 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.455, whole genome shotgun sequence.
ACCESSION   DAPGWB010000443 DAPGWB010000000
VERSION     DAPGWB010000443.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.455"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            107..>465
                     /locus_tag="RHX79_004897"
     CDS             107..>465
                     /locus_tag="RHX79_004897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000222506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV2199937.1"
                     /translation="MTHSTIKQLTIKAILEYIEDNIEVKSIDIESIVCFSGYSRRYLQ
                     SLFKSHMGVPIGRYIQLRRVSRAAVLLRLTSLSLASIAGKLCYDSQQTFTREFKKNTG
                     FTPLQYRNSNLWTFKNLT"
BASE COUNT          155 a           79 c           90 g          141 t
ORIGIN      
        1 cgcgattttg ttggcttatt gtgcactgtg tgctgcttgc gcacaataag ctaatgcgaa
       61 cgtatagtaa ccacattaga ctttatgcgt ctaaatgagg ttaatgatga cgcacagcac
      121 aattaagcaa ttgacaataa aagcaattct cgaatacatc gaagacaata ttgaggttaa
      181 aagtatcgat attgaatcga tagtctgttt ttctggttac agtaggagat atttgcaatc
      241 tctgtttaag tctcacatgg gagtacccat agggaggtat atacaactca gaagagtttc
      301 aagggctgcg gtattattac gattgacatc attatcattg gccagtattg caggcaaact
      361 ctgttatgat tctcaacaaa catttacaag agagtttaaa aaaaacacag gttttacgcc
      421 tttacaatat agaaacagta atctatggac ctttaaaaat cttac
//
LOCUS       DAPGWB010000444          462 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.456, whole genome shotgun sequence.
ACCESSION   DAPGWB010000444 DAPGWB010000000
VERSION     DAPGWB010000444.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.456"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>462
                     /locus_tag="RHX79_004898"
     CDS             <1..>462
                     /locus_tag="RHX79_004898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NTPase"
                     /protein_id="HDV2199938.1"
                     /translation="MVIDGDWGTGKTEFSKKLASLIEINSTNHKVVYIDAFTEDHNDA
                     PILTIMAAIAALYNSDEKKELISKALPALRFGLKTVLKAGAGWVLKQNADEINEEFEE
                     VIKDAANSAIDGTIEALLEDHIEAQKNVLALKEVLTKLAGESKLTIIIDEL"
BASE COUNT          173 a           74 c           97 g          118 t
ORIGIN      
        1 tatggtcata gatggggact gggggactgg aaaaacagag ttttcaaaaa agttagcatc
       61 cttaattgaa ataaactcga ccaatcataa agtagtttat atagatgctt ttactgaaga
      121 tcacaacgat gctcccatac ttacaataat ggccgcaatt gcagctctat ataatagcga
      181 tgaaaaaaag gaattaatat ctaaggcatt gccagccctc agattcggac ttaagactgt
      241 actcaaagct ggtgctggtt gggtattaaa acaaaatgcg gatgaaatta atgaggaatt
      301 tgaagaggtt atcaaagacg ctgcaaattc agctatcgat ggaaccatcg aggctctgtt
      361 agaagatcat atcgaggcac aaaagaacgt tcttgctcta aaagaagtac taaccaaatt
      421 agctggagaa agtaaactaa caataattat agatgagtta ga
//
LOCUS       DAPGWB010000445          456 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.457, whole genome shotgun sequence.
ACCESSION   DAPGWB010000445 DAPGWB010000000
VERSION     DAPGWB010000445.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.457"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..111)
                     /locus_tag="RHX79_004899"
     CDS             complement(<1..111)
                     /locus_tag="RHX79_004899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system protein
                     TraL"
                     /protein_id="HDV2199939.1"
                     /translation="MSGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAIC"
     gene            complement(126..>456)
                     /gene="traA"
                     /locus_tag="RHX79_004900"
     CDS             complement(126..>456)
                     /gene="traA"
                     /locus_tag="RHX79_004900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001401864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type IV conjugative transfer system pilin TraA"
                     /protein_id="HDV2199940.1"
                     /translation="SAPVEKKSFFSKFTRLNMLRLVRAVIPVAVLMMLFPELAMAAGK
                     GDLMAKGNDTVKATFGKDSSIVKWVVLAEVLVGAVMYMMTKNVKFLVGFAIISVFIAV
                     GMSVVGL"
BASE COUNT          131 a          122 c           99 g          104 t
ORIGIN      
        1 acagattgct gcggggatca gttcatccag tggcaggcca aaccagcggc tctggttggt
       61 cagtgtttcc gggaaacgat atttcttaag tttattctcg tctcccgaca tcgttttatt
      121 tcctgtcaga ggccaacgac gctcataccc acagcaataa atacagagat gatggcaaag
      181 ccgaccagga acttgacgtt tttggtcatc atgtacatga ccgcaccgac cagcacctca
      241 gccagaacaa cccatttaac gatactggag tccttaccga aggtcgcctt aaccgtatcg
      301 ttacctttag ccatcaggtc gcctttacca gcagccatag ctaactcagg gaacaacatc
      361 atcagaacag caaccgggat cactgcacga accaggcgaa gcatattcag acgagtgaat
      421 ttagaaaaaa acgatttctt ttcaacgggc gcagaa
//
LOCUS       DAPGWB010000446          451 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.458, whole genome shotgun sequence.
ACCESSION   DAPGWB010000446 DAPGWB010000000
VERSION     DAPGWB010000446.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.458"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>451
                     /locus_tag="RHX79_004901"
     CDS             <1..>451
                     /locus_tag="RHX79_004901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001093689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDV2199941.1"
                     /translation="KFSNYLTAMALNWMRGKSLPEIISLSIAKKKEKNSTRPVNVDRA
                     VREVFDFVEDNLRFKYVQLGKAYIDLLRQALIVNNQAEKAEEIYDFPLSLELGVSSIA
                     GQVFIELGLSRISASYLENIIPNSNPTISTAKEWLRNNDYDSLNLPLT"
BASE COUNT          157 a           85 c           81 g          128 t
ORIGIN      
        1 aagttttcta actacctcac agccatggca ttaaattgga tgagaggaaa atcccttcca
       61 gagatcatat ctctttcgat agcaaagaaa aaagaaaaaa attctacccg accagtgaat
      121 gtagaccgag ctgtacgaga ggtttttgat ttcgttgagg acaacctgcg attcaaatac
      181 gttcaacttg gtaaggcata tattgattta ttgcgacaag ctttaattgt aaataatcaa
      241 gctgaaaaag cggaagaaat atatgacttc cctttatcac ttgaattagg tgtttcctca
      301 atcgctggac aagtttttat tgagctgggg ctatcaagaa tatcagcatc ctatcttgaa
      361 aatataatcc caaactctaa tcctacgata agcacggcaa aagagtggct aagaaacaat
      421 gattatgatt cattaaattt gccactcacc a
//
LOCUS       DAPGWB010000447          445 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.459, whole genome shotgun sequence.
ACCESSION   DAPGWB010000447 DAPGWB010000000
VERSION     DAPGWB010000447.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.459"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..404
                     /locus_tag="RHX79_004902"
     CDS             <1..404
                     /locus_tag="RHX79_004902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000087142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="N-acetylneuraminate synthase family protein"
                     /protein_id="HDV2199942.1"
                     /translation="YAGIAAVPFGITFIEKHFTLDKTLPGPDHKASVTPDELRMLCEG
                     IRCVELALGSPDKKVTDSEKKNKIVARKSIVAKTKIAKGDIFTVDNITTKRPGNGISP
                     MYWYEILGKAAEFDFEEDELVVHTAYKPQEV"
BASE COUNT          157 a           72 c           91 g          125 t
ORIGIN      
        1 tctatgcagg aattgcggct gtccctttcg gtattacatt tatcgaaaaa cattttacac
       61 tagataaaac tttaccggga cctgaccaca aagcatcagt tacgccagat gaattgagga
      121 tgctatgtga aggaataagg tgtgttgaac ttgcgctagg ttctccagac aaaaaagtaa
      181 cagattcaga gaagaaaaat aaaattgttg ccagaaaatc tatcgtagct aaaactaaaa
      241 ttgcgaaagg tgatattttc acagtagata atattacgac taaaagacca ggaaatggta
      301 taagccctat gtattggtac gaaattcttg gtaaagctgc cgaattcgat tttgaagaag
      361 atgaattagt ggttcatact gcatataaac cgcaagaggt ttaattttga aaaagattgc
      421 tctaatacct gctcgttcag gttca
//
LOCUS       DAPGWB010000448          441 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.460, whole genome shotgun sequence.
ACCESSION   DAPGWB010000448 DAPGWB010000000
VERSION     DAPGWB010000448.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.460"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            1..388
                     /locus_tag="RHX79_004903"
                     /pseudo
     CDS             1..388
                     /locus_tag="RHX79_004903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310088.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
BASE COUNT          120 a           60 c          121 g          140 t
ORIGIN      
        1 ggaacatcat caattgatat tactggcagt ggagatctaa tatcattagg tggtcatgca
       61 ggacttggcg ttgcgtttgc taaaaagaaa ggtgaaatgt tatctgatat ttgtatttat
      121 gctacagcat gcggacatgc aggaattggt ggtgggataa atgcggctat cacatattct
      181 gagaccaagt ctttacctac atcgggagtc agcaattcag taggtgtaac ggttggcggc
      241 ggagttgggg gggcattttg cgtatactta tgtagtggat gttgataatc cagaatcatc
      301 gacagaatct gttggtatcg gtgcaggtgt tgacgcttca gttatgactc tggcttgtag
      361 aacgtggcaa gaatgctggg tcaattaaca ggaggaaata tgaaaaaata tatattttta
      421 gttttatttt tattgtgtgg t
//
LOCUS       DAPGWB010000449          438 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.461, whole genome shotgun sequence.
ACCESSION   DAPGWB010000449 DAPGWB010000000
VERSION     DAPGWB010000449.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.461"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
BASE COUNT          130 a           85 c          112 g          111 t
ORIGIN      
        1 atattcaacg caccatttga ccgggatgtg aatatttatg gtgggctatt ggcaaaaaat
       61 atctggaaag tagatcgcag aaaataaaaa aacctgctgg tgaggcaggt tcttttattt
      121 actactttga tgttaagtta ctgatagtgc aacatggcat ctcaacgaac gaattataac
      181 cacctctgga cagtgttgca attaagataa tgagatttat aatcctgact gttgggaagt
      241 tgcgccggat cgaacccatt tcaagtcctg gctaccggac gggtggtgcc gcaggtagtg
      301 ctctgatccg gagtgcaaca tggcgactca acaaacgtaa accagtatcg acaggcagtg
      361 taagggtaag gtgctggtgt tgcgctcctt aataaggaga gcggatggac acgctgacac
      421 aaaagttaac cgtgctca
//
LOCUS       DAPGWB010000450          437 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.462, whole genome shotgun sequence.
ACCESSION   DAPGWB010000450 DAPGWB010000000
VERSION     DAPGWB010000450.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.462"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..>437)
                     /locus_tag="RHX79_004904"
     CDS             complement(<1..>437)
                     /locus_tag="RHX79_004904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000490374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDV2199943.1"
                     /translation="SDERDSYVRVDSIGRVIIGDDVEIGCNNTIDRGTLGDTIIGQGT
                     RIDNQVQIGHDCIIGNKCLIVSQCGFSGHVVLGDHVITHGQVGIAGHISIGSYSVIKA
                     KSGVSHSCPEKSDLFGYPAKNTREYNKNLAVLNKLTKQHGVYK"
BASE COUNT          124 a           98 c           78 g          137 t
ORIGIN      
        1 tttatataca ccatgctgtt tagttagttt attaaggaca gcgagatttt tgttgtattc
       61 tcgcgtattt ttggcagggt aaccaaaaag gtcactcttt tcaggacaag aatggcttac
      121 acctgattta gccttaatta ccgaataact accaattgat atgtgaccgg cgattccgac
      181 ttgaccatgt gtaataacat ggtcgcctaa aactacgtgt cctgaaaaac cgcattgtga
      241 aacaatcagg catttattac cgattatgca gtcatgtcca atctgcactt gattatcaat
      301 acgagtgcct tggcctataa tcgtatctcc aagtgtccct cggtcaatgg tgttgttaca
      361 accgatttca acatcatcac ctatgattac tctaccgatg ctatcaactc ggacatatga
      421 atcacgttca tccgaca
//
LOCUS       DAPGWB010000451          426 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.463, whole genome shotgun sequence.
ACCESSION   DAPGWB010000451 DAPGWB010000000
VERSION     DAPGWB010000451.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 426)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 426)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.463"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            88..279
                     /locus_tag="RHX79_004905"
     CDS             88..279
                     /locus_tag="RHX79_004905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2633 family protein"
                     /protein_id="HDV2199944.1"
                     /translation="MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHH
                     QSKKEAQQSTLSVESPVQR"
BASE COUNT          104 a          110 c           83 g          129 t
ORIGIN      
        1 tacataacga agaattgacc attttgtcct gttgtgcctt aatgtaagta ccgtccacag
       61 cgtgggacat acttcaagga accttttgtg agtcaggcaa ccagtatgcg aaaacgacac
      121 cgatttaaca gtcgcatgac ccgtatcgta ctgctcatca gctttatctt cttctttggc
      181 cgttttatct actcgtccgt cggtgcctgg cagcaccatc agagcaaaaa agaagctcag
      241 caatccacac tctccgtcga atcaccggta caacgttagc ggttaccttc tccactttca
      301 cagaacctaa cggcacttcg ctgtcggatg cttttgctct ttggaattat caaagcggca
      361 gatattcttt catcttaaat tttacgtctt tgtcctgact gatgtttatc ctgtttggct
      421 gcgaaa
//
LOCUS       DAPGWB010000452          419 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.464, whole genome shotgun sequence.
ACCESSION   DAPGWB010000452 DAPGWB010000000
VERSION     DAPGWB010000452.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.464"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>419
                     /locus_tag="RHX79_004906"
     CDS             <1..>419
                     /locus_tag="RHX79_004906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012602581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199945.1"
                     /translation="NDLVNYSHDNTRTSVGARLAMYEVGLKTYSPIGQSLEKRAEKIH
                     ELEEKEPRLSGALPYVDSHLHNDLIDTLSTRGIPGVVLTILAFSAILIYALRTAKEPY
                     ILILLFSLLVVGLSDVILFSKPVPTAVFITIILLCAY"
BASE COUNT          130 a           77 c           74 g          138 t
ORIGIN      
        1 ataacgattt agttaattat tcgcatgata acaccagaac ttcagtcggt gcccgtctgg
       61 caatgtatga agttggctta aaaacatatt ctccaatagg acaatcactg gaaaaacgtg
      121 cggaaaaaat acatgaacta gaagaaaaag agcctagatt gagtggcgct ttaccctatg
      181 tagattctca tttgcataac gatctcatag atacgttatc aacgcgtggt attcctggag
      241 ttgtattaac aattttagca ttttcagcaa tactcatata tgccttaaga actgctaaag
      301 aaccttatat tttaatcttg cttttttcac tactggtagt aggactaagt gatgtaatac
      361 tcttttctaa accggttccg actgctgtgt ttatcaccat aatattgctt tgtgcttat
//
LOCUS       DAPGWB010000453          416 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.465, whole genome shotgun sequence.
ACCESSION   DAPGWB010000453 DAPGWB010000000
VERSION     DAPGWB010000453.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.465"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            43..>416
                     /locus_tag="RHX79_004907"
     CDS             43..>416
                     /locus_tag="RHX79_004907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HDV2199946.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILN"
BASE COUNT           92 a          111 c          111 g          102 t
ORIGIN      
        1 tggtgataaa cttatcatcc ccttttgctg atggagctgc acatgaaccc attcaaaggc
       61 cggcattttc agcgtgacat cattctgtgg gccgtacgct ggtactgcaa atacggcatc
      121 agttaccgtg agctgcagga gatgctggct gaacgcggag tgaatgtcga tcactccacg
      181 atttaccgct gggttcagcg ttatgcgcct gaaatggaaa aacggctgcg ctggtactgg
      241 cgtaaccctt ccgatctttg cccgtggcac atggatgaaa cctacgtgaa ggtcaatggc
      301 cgctgggcgt atctgtaccg ggccgtcgac agccggggcc gcactgtcga tttttatctc
      361 tcctcccgtc gtaacagcaa agctgcatac cggtttctgg gtaaaatcct caacaa
//
LOCUS       DAPGWB010000454          414 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.466, whole genome shotgun sequence.
ACCESSION   DAPGWB010000454 DAPGWB010000000
VERSION     DAPGWB010000454.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 414)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.466"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            56..232
                     /locus_tag="RHX79_004908"
     CDS             56..232
                     /locus_tag="RHX79_004908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001351582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA"
                     /protein_id="HDV2199947.1"
                     /translation="MLNLPIRKLFPTRIASNYGMNFEFMPELKWGFGYPGAIIFMILA
                     GLTPYLYFKRKNWL"
BASE COUNT          117 a           86 c           91 g          120 t
ORIGIN      
        1 acatctctga agagaacctc gttaatgatt ggtcttgctc attgttaata acaaaatgtt
       61 gaatttaccg attaggaaac tttttcctac gcggattgcc tccaactatg gcatgaactt
      121 tgagtttatg ccagaactga agtggggctt cggctaccct ggcgcgatta tctttatgat
      181 cctcgcgggc ctgacaccgt atctgtactt taagcgtaag aactggctgt aactatacga
      241 tgtcgctgtg agtaagttag tgtgctgaca gcgacatttt agccgaggga atcgcagata
      301 acataattgt tgtgaataat atccatgcca cgttgagttg gacgcttaat gactcacatc
      361 tcaccccttc aattgctgca gagataatag aaaaaagtgt caagcccaat gaaa
//
LOCUS       DAPGWB010000455          412 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.467, whole genome shotgun sequence.
ACCESSION   DAPGWB010000455 DAPGWB010000000
VERSION     DAPGWB010000455.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.467"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>412
                     /locus_tag="RHX79_004909"
     CDS             <1..>412
                     /locus_tag="RHX79_004909"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199948.1"
                     /translation="FLRLRTLLLIPLILVPLYTIAINVISQDRLDYYFQRLNISENST
                     NTSTLTLMSGYEQAYLALKDSYGFGFGLQRMGYPNNRGSFVDIIGLLRDGNTDSNLHD
                     GGLFISKLTVEFGVLGVGFFLYVTMLGVKNINTRC"
BASE COUNT          123 a           66 c           78 g          145 t
ORIGIN      
        1 ttttttgcgt ttgagaactc tattactaat cccattgatc ttagtccctt tatatacaat
       61 tgctataaat gtcataagcc aagatcgatt ggactattac tttcaacgcc tgaatatttc
      121 tgaaaactca accaatacat ctacactaac cttaatgtca ggttatgaac aagcatatct
      181 tgcactaaaa gatagttatg gatttggatt cggtttacag cgcatgggat atccaaataa
      241 ccggggatct tttgtggata tcattggatt attgagagat ggtaatactg attcaaatct
      301 gcacgatggt ggtcttttca tatctaagct aaccgttgaa tttggagtgc tgggagtagg
      361 attctttttg tatgttacaa tgcttggtgt taaaaatatt aatacaaggt gt
//
LOCUS       DAPGWB010000456          411 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.468, whole genome shotgun sequence.
ACCESSION   DAPGWB010000456 DAPGWB010000000
VERSION     DAPGWB010000456.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 411)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 411)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.468"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..273)
                     /locus_tag="RHX79_004910"
     CDS             complement(<1..273)
                     /locus_tag="RHX79_004910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscR/YscR/HrcR family type III secretion system
                     export apparatus protein"
                     /protein_id="HDV2199949.1"
                     /translation="MSNSISLIAILSLFTLLPFIIASGTCFIKFSIVFVIVRNALGLQ
                     QVPSNMTLNGVALLLSMFVMMPVGKEIYNNSQNENLSFNNVASVVNF"
     gene            complement(263..>411)
                     /locus_tag="RHX79_004911"
     CDS             complement(263..>411)
                     /locus_tag="RHX79_004911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HDV2199950.1"
                     /translation="IISLLPESEKNIEIRVNGALTGYGELVEVDDKLGVEIHSWLSGN
                     NNVK"
BASE COUNT          141 a           88 c           59 g          123 t
ORIGIN      
        1 aaaattaaca accgatgcta cattattgaa tgaaagattc tcattctgac tgttattata
       61 tatttccttc ccaaccggca tcattacgaa cattgacaat agcaaagcaa ccccattaag
      121 tgtcatattt gatggcactt gctgaagtcc cagcgcgttt cggacaataa caaaaacaat
      181 cgagaattta ataaaacatg tcccggatgc tattataaac ggcaatagtg taaataatga
      241 taatatcgct atcagcgaaa tgctatttga cattattatt ccctgataac caagaatgaa
      301 tttctacgcc caatttatca tccacttcaa caagttcgcc atagccagtt agcgcaccat
      361 ttacacgtat ctctatattt ttctcagatt caggaagcag agatattatt c
//
LOCUS       DAPGWB010000457          405 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.469, whole genome shotgun sequence.
ACCESSION   DAPGWB010000457 DAPGWB010000000
VERSION     DAPGWB010000457.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.469"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..>405)
                     /locus_tag="RHX79_004912"
     CDS             complement(<1..>405)
                     /locus_tag="RHX79_004912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310088.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HDV2199951.1"
                     /translation="LEEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKVHF
                     YHCDHRGLPLALISEDGNTAWRGEYDEWGNQLNEENPYYLHQPYRLPGQQHDEESGLY
                     YNRNRYYDPLQGRYITQDPIGLAGGWNLYNYPL"
BASE COUNT           66 a          134 c          104 g          101 t
ORIGIN      
        1 cagtgggtaa ttatacaggt tccatccccc cgccagccca atggggtctt gtgtaatata
       61 cctcccctgt agcgggtcat agtaccggtt ccggttatag tacagccctg attcctcatc
      121 atgctgctgc cccggcagac ggtatggctg gtgcaggtaa tacgggttct cttcattaag
      181 ctggttgccc cattcatcat actccccgcg ccacgccgta ttgccgtctt cgctgatgag
      241 cgccagcggc aggccccggt ggtcgcagtg gtaaaaatga acttttcgcg ccggtgtgta
      301 ttccggctcc acctgtctgg ccagttgctc caccgtcagc ccgcactgcg caagccacgc
      361 ccggctttca ctgctcacgc ggtctgcccg gatttcttcc tccag
//
LOCUS       DAPGWB010000458          401 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.470, whole genome shotgun sequence.
ACCESSION   DAPGWB010000458 DAPGWB010000000
VERSION     DAPGWB010000458.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.470"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(82..291)
                     /gene="fumD"
                     /locus_tag="RHX79_004913"
     CDS             complement(82..291)
                     /gene="fumD"
                     /locus_tag="RHX79_004913"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase FumD"
                     /protein_id="HDV2199952.1"
                     /translation="MGNRTKEDELYREMCRVVGNVVLEMRDLGQEPKHIVIAGVLRTA
                     LANKRIQRSELEKQAMETVINALVK"
BASE COUNT          119 a           99 c           61 g          122 t
ORIGIN      
        1 cagttgttat ttagaatgat taactggacc gcaactgaag caagaatatc aggatgaagc
       61 ttaccgcctc atcctgaatg gtcattttac cagtgcgtta atgacggttt ccatcgcctg
      121 cttttccagc tcactgcgct gaatgcgttt attggctaat gctgtacgta atacgcctgc
      181 gataacaata tgctttggtt cctgccccag atcgcgcatt tccagcacaa cattaccgac
      241 aactctgcac atttctcggt acagttcatc ctcttttgtc cgatttccca ttctttatac
      301 ctatttatca tgccaactat cagcatatat caatctaacc aattaaacaa aaatcaaaca
      361 aaatcagaca aataacgcga taaattattt taactatagc a
//
LOCUS       DAPGWB010000459          397 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.471, whole genome shotgun sequence.
ACCESSION   DAPGWB010000459 DAPGWB010000000
VERSION     DAPGWB010000459.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.471"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..105)
                     /locus_tag="RHX79_004914"
     CDS             complement(<1..105)
                     /locus_tag="RHX79_004914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDV2199953.1"
                     /translation="MTNHIHFRCPCCHGSQYRTSSFDVSDRNPFGAKCI"
     gene            complement(116..328)
                     /gene="cspI"
                     /locus_tag="RHX79_004915"
     CDS             complement(116..328)
                     /gene="cspI"
                     /locus_tag="RHX79_004915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspI"
                     /protein_id="HDV2199954.1"
                     /translation="MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKT
                     LTENQEVEFGIENGPKGPAAVHVEAL"
BASE COUNT          127 a           83 c           71 g          116 t
ORIGIN      
        1 gatacatttt gccccgaaag gatttctgtc agaaacatca aaagatgatg ttctatactg
       61 agaaccatgg caacacgggc atctaaagtg aatatggttt gtaatatttt ctacctcaaa
      121 gtgcctctac atgaacagct gcagggcctt taggtccgtt ctcaatacca aattcgactt
      181 cctgattctc agttaacgtt ttgaaatcgt tgctctgaat agctgagaaa tgcacaaaca
      241 catctttgct accatctttc ggcgtgatga aaccaaaacc tttttcaggg ttaaaccatt
      301 tcactaaacc agtcattttg ttagacatca ttattacctt ttgaagaagt tagcccttgg
      361 gcagaatggt ccgaaaaaaa atatcagaga gaaaaac
//
LOCUS       DAPGWB010000460          397 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.472, whole genome shotgun sequence.
ACCESSION   DAPGWB010000460 DAPGWB010000000
VERSION     DAPGWB010000460.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.472"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(<1..363)
                     /locus_tag="RHX79_004916"
     CDS             complement(<1..363)
                     /locus_tag="RHX79_004916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3289 family protein"
                     /protein_id="HDV2199955.1"
                     /translation="MNNILLPPINIPCTLFETISLFDDFSADDMQYGDMVEQDFLSLG
                     LSDISAKVDPYRLIKYHFPGPGSINVAFSASSSGTKISQRECTDILFAEMKELAKMLS
                     FFGQYKTLIEDLIEHFRYG"
BASE COUNT          131 a           61 c           72 g          133 t
ORIGIN      
        1 tccatatcta aaatgttcaa tcagatcttc gataagtgtt ttatattgtc caaaaaagga
       61 aagcattttt gctagttctt tcatttctgc aaataaaata tcagtgcatt cacgttgtga
      121 tatttttgtt ccggaacttg aggcactaaa agcaacatta atagaacctg ggccagggaa
      181 atggtattta ataagtctgt aaggatcaac ttttgctgag atatcgctta ggccgagtga
      241 gagaaagtct tgttctacca tatcaccata ttgcatatca tcagcagaaa aatcatcgaa
      301 taaactaata gtttcgaaaa gtgtacaggg aatattaatt ggcggaagta atatgttatt
      361 catttgcatt tgccttggtt atatttaagc tcaatat
//
LOCUS       DAPGWB010000461          393 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.473, whole genome shotgun sequence.
ACCESSION   DAPGWB010000461 DAPGWB010000000
VERSION     DAPGWB010000461.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.473"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>393
                     /locus_tag="RHX79_004917"
     CDS             <1..>393
                     /locus_tag="RHX79_004917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HDV2199956.1"
                     /translation="GFRLFCEGGVRPPLEKMMPLLDKLREQYGVRPVCSELHIAPSTY
                     YHCQQQRHHPDKRSARAQHDDWLKKEIQRVYDENHQVYGVRKVWRQLLREGIRVARCT
                     VARLMAVMGLAGVLRGKKVRTTVSRKAVA"
     misc_feature    8..124
                     /locus_tag="RHX79_004917"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01497"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="AL1L pseudoknot; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01497"
BASE COUNT           98 a           95 c          117 g           83 t
ORIGIN      
        1 aggcttccgc ttattttgcg aaggcggagt tcgaccgcct ctggaaaaaa tgatgccact
       61 gctggataag ctgcgtgagc agtacggggt cagaccggta tgcagcgaac tgcatattgc
      121 cccgtcaacg tattaccatt gtcagcaaca gcgacatcat ccggataaac gcagtgcccg
      181 tgcgcagcac gatgactggc tgaagaaaga gatacagcgc gtatacgatg aaaatcacca
      241 ggtatacggt gtgcgtaaag tctggcgtca gttgttacgg gaaggtatca gagtggccag
      301 atgcactgtg gcacgtctca tggcagttat gggacttgcc ggtgttctcc ggggtaaaaa
      361 ggtccgcact accgtcagcc ggaaagccgt tgc
//
LOCUS       DAPGWB010000462          390 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.474, whole genome shotgun sequence.
ACCESSION   DAPGWB010000462 DAPGWB010000000
VERSION     DAPGWB010000462.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.474"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>390
                     /locus_tag="RHX79_004918"
     rRNA            <1..>390
                     /locus_tag="RHX79_004918"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT           89 a           85 c          130 g           86 t
ORIGIN      
        1 acagtgtctg gtgggtagtt tgactggggc ggtctcctcc taaagagtaa cggaggagca
       61 cgaaggttgg ctaatcctgg tcggacatca ggaggttagt gcaatggcat aagccagctt
      121 gactgcgagc gtgacggcgc gagcaggtgc gaaagcaggt catagtgatc cggtggttct
      181 gaatggaagg gccatcgctc aacggataaa aggtactccg gggataacag gctgataccg
      241 cccaagagtt catatcgacg gcggtgtttg gcacctcgat gtcggctcat cacatcctgg
      301 ggctgaagta ggtcccaagg gtatggctgt tcgccattta aagtggtacg cgagctgggt
      361 ttagaacgtc gtgagacagt tcggtcccta
//
LOCUS       DAPGWB010000463          386 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.475, whole genome shotgun sequence.
ACCESSION   DAPGWB010000463 DAPGWB010000000
VERSION     DAPGWB010000463.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.475"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(1..301)
                     /locus_tag="RHX79_004919"
                     /pseudo
     CDS             complement(1..301)
                     /locus_tag="RHX79_004919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308632.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT           73 a          109 c          105 g           99 t
ORIGIN      
        1 ggatgatccg gtccgcagcg tcgtactcat aaaacaggtg gtagtccagc cgcgcatccg
       61 cttcggtcag ccgcccccgc gcatcctgtt cgtaggtcgc cagcgtctgt atgccgttat
      121 ccgtgcggtg aatggctttc aggtagccgc tggcatggta cgtcagttta agccggatcc
      181 cgtcggtgtg actgacacac gtgatccggt actggctgtc gcgctcaaac gtgatgcggt
      241 tgctggcggt gtcactcatc ccgcccagca tatacatccg gtcgtcgggg ttgtgtgcca
      301 ggtgtcatat caagttggcc ttacggaatt tcaactgcct ccttgccatt aatcaatata
      361 tcaattgatg aagataaatt atcccc
//
LOCUS       DAPGWB010000464          383 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.476, whole genome shotgun sequence.
ACCESSION   DAPGWB010000464 DAPGWB010000000
VERSION     DAPGWB010000464.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.476"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>383
                     /locus_tag="RHX79_004920"
     CDS             <1..>383
                     /locus_tag="RHX79_004920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDV2199957.1"
                     /translation="KSGWSEWEESATDSMSQVKSAATQTFDGIAQNMAAMLTGSEQNW
                     RSFTRSVLSMMTEILLKQAMVGIVGSIGSAIGGAVGGGASASGGTAIQAAAAKFHFAT
                     GGFTGTGGKYEPAGIVHRGEFVFTK"
BASE COUNT           86 a           88 c          131 g           78 t
ORIGIN      
        1 aagtccggct ggagtgagtg ggaagagagc gccacggaca gtatgtcgca ggtaaaaagt
       61 gcagccacgc agacctttga tggtattgca cagaatatgg cggcgatgct gaccggcagt
      121 gagcagaact ggcgcagctt cacccgttcc gtgctgtcca tgatgacaga aattctgctt
      181 aagcaggcaa tggtggggat tgtcgggagt atcggcagcg ccattggcgg ggctgttggt
      241 ggcggcgcat ccgcgtcagg cggtacagcc attcaggccg ctgcggcgaa attccatttt
      301 gcaaccggag gatttacggg aaccggcggc aaatatgagc cagcggggat tgttcaccgt
      361 ggtgaatttg tcttcacgaa gga
//
LOCUS       DAPGWB010000465          380 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.477, whole genome shotgun sequence.
ACCESSION   DAPGWB010000465 DAPGWB010000000
VERSION     DAPGWB010000465.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.477"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>380
                     /locus_tag="RHX79_004921"
     CDS             <1..>380
                     /locus_tag="RHX79_004921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HDV2199958.1"
                     /translation="TGHAHLDIAWMWPLREGRRKAIRTFATALTNIEKYPDYIFGASQ
                     YQLFHWIKKDYPYFFEKLKKQIAAGRFELQGCFWVECDLNLVSGESLIRQIMHGTRFT
                     LQNFSKKINYVWQPDVFGFPATLP"
BASE COUNT          119 a           78 c           79 g          104 t
ORIGIN      
        1 tactggtcat gcccatttag atatagcgtg gatgtggcct ttaagagaag gacgcagaaa
       61 agcaataaga acatttgcca ccgccctgac aaacattgaa aaatatcctg attacatttt
      121 tggcgctagt cagtaccaac tttttcactg gataaaaaaa gattatccct atttcttcga
      181 aaagttaaaa aaacaaatcg ccgcaggccg ctttgagtta caaggttgct tttgggtcga
      241 atgcgattta aatctggtaa gtggtgaatc gctgataagg caaatcatgc atgggacacg
      301 attcacactg cagaattttt caaagaagat aaattatgtc tggcaaccgg atgtctttgg
      361 attccccgcc acgcttccac
//
LOCUS       DAPGWB010000466          379 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.478, whole genome shotgun sequence.
ACCESSION   DAPGWB010000466 DAPGWB010000000
VERSION     DAPGWB010000466.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.478"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..>379
                     /gene="traE"
                     /locus_tag="RHX79_004922"
     CDS             <1..>379
                     /gene="traE"
                     /locus_tag="RHX79_004922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type IV conjugative transfer system protein
                     TraE"
                     /protein_id="HDV2199959.1"
                     /translation="IQGVNNYRLQNEQRTAVTPMGFNVPFAVSQNSADASYLQQMALS
                     FIALRLNVSPEIVDASHQALLQYIRPGAQNQMKVILAEEAKLIKKDNVNSAFFQTSVR
                     VWPQYGRVEIRGIRKTWIGNSEP"
BASE COUNT           95 a           92 c           90 g          102 t
ORIGIN      
        1 tcattcaggg ggtgaataac taccgtcttc agaatgagca acgcactgcc gtgaccccaa
       61 tgggatttaa tgtgcccttt gccgtgtcac agaacagtgc cgatgcctct tatttgcagc
      121 agatggcgct gtcatttatt gccctccgtc tgaatgtctc accggaaatc gtcgatgctt
      181 cacatcaggc gcttctgcaa tatatccgcc cgggtgcaca gaaccagatg aaagttattc
      241 tggctgaaga agcgaaactc attaaaaaag ataacgtgaa ttctgctttt ttccagacca
      301 gtgtccgtgt ctggcctcag tatggtcgtg tggaaatccg tggaattcgg aaaacatgga
      361 ttggtaactc cgaaccttt
//
LOCUS       DAPGWB010000467          376 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.denovo.479, whole genome shotgun sequence.
ACCESSION   DAPGWB010000467 DAPGWB010000000
VERSION     DAPGWB010000467.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.denovo.479"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..187
                     /locus_tag="RHX79_004923"
     CDS             <1..187
                     /locus_tag="RHX79_004923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001077738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV2199960.1"
                     /translation="KHVEDGMVSLDDELATVVATGLIEAIVTATDSNSLLWQDLSKFL
                     GDKSKSHALVWKNFGQE"
BASE COUNT          115 a           45 c           95 g          121 t
ORIGIN      
        1 taaacatgtc gaagatggta tggtttcgct tgatgatgaa ttggccacag ttgtagctac
       61 agggcttata gaggcaatag tcactgcgac cgatagcaat tctttacttt ggcaagattt
      121 aagtaaattt ctgggtgaca aatcaaagtc tcatgcatta gtgtggaaaa attttggtca
      181 ggagtgatat tattcaagaa gtattaagct cgctattgag atcttaatgc ttcttgagat
      241 taaattaaag ttaggacgaa gtaattgcag gtggaaataa atccatggtg acgtgtggca
      301 atggctatta gatgttatgg tgtgatgggc tttggtgatt taagagctaa gttagattgc
      361 cttatgaaaa agtatg
//
LOCUS       DAPGWB010000468        17477 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.guided.094, whole genome shotgun sequence.
ACCESSION   DAPGWB010000468 DAPGWB010000000
VERSION     DAPGWB010000468.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 17477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17477
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.guided.094"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            complement(251..796)
                     /gene="orn"
                     /locus_tag="RHX79_004924"
     CDS             complement(251..796)
                     /gene="orn"
                     /locus_tag="RHX79_004924"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HDV2199961.1"
                     /translation="MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGP
                     TIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS
                     PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQA
                     MDDIRESVAELAYYREHFIKL"
     gene            891..1943
                     /gene="rsgA"
                     /locus_tag="RHX79_004925"
     CDS             891..1943
                     /gene="rsgA"
                     /locus_tag="RHX79_004925"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HDV2199962.1"
                     /translation="MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIV
                     ISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE
                     RTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN
                     KIDLLDDEGMEFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV
                     GKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW
                     HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE
                     SMAQVKTRKNFSDTDD"
     gene            2040..3008
                     /gene="psd"
                     /locus_tag="RHX79_004926"
     CDS             2040..3008
                     /gene="psd"
                     /locus_tag="RHX79_004926"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313166.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDV2199963.1"
                     /translation="MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKY
                     YKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEED
                     KILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYV
                     PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTIT
                     PPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSV
                     TKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV"
     gene            3030..6353
                     /gene="mscM"
                     /locus_tag="RHX79_004927"
     CDS             3030..6353
                     /gene="mscM"
                     /locus_tag="RHX79_004927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="miniconductance mechanosensitive channel MscM"
                     /protein_id="HDV2199964.1"
                     /translation="MRLIITFLMAWCLSWGAYAATAPDSKQISQELEQAKAAKPAQPE
                     VVEALQSALNALEERKGSLERIKQYQEVIDNYPKLSATLRAQLNNMRDEPRSVSPGMS
                     TDALNQEILQVSSQLLDKSRQAQQEQERAREIADSLNQLPQQQTDARRQLNEIERRLG
                     TLTGNTPLNQAQNFALQSDSARLKALVDELELAQLSANNRQELARLRSELAEKESQQL
                     DAYLQALRNQLNSQRQLEAERALESTELLAENSADLPKDIVAQFKINRELSAALNQQA
                     QRMDLVASQQRQATSQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQ
                     QLDTEMAQLRVQRLRYEDLLNKQPLLRQIHQADGQPLTAEQNRILEAQLRTQRELLNS
                     LLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQDL
                     RRLISLDTFSQLGKASVMMLTSKETILPLFGALILVGCSIYSRRYFTRFLERSAAKVG
                     KVTQDHFWLTLRTLFWSILVASPLPVLWMTLGYGLREAWPYPLAVAIGDGVTATVPLL
                     WVVMICATFARPNGLFIAHFGWPRERVSRGMRYYLMSIGLIVPLIMALMMFDNLDDRE
                     FSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKEGSGDNITNHMLWNMMIGAPLVA
                     ILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRRWMLIQRRRLAFDRAKHRRAE
                     MLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLRLVRSILMLIALLSVIVLW
                     SEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLE
                     LAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFG
                     LQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNK
                     AFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLVIDNPAPEVFL
                     VDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQMRLESLNG
                     KQTGRTLTSAGKGRQAGSL"
     gene            complement(6504..8006)
                     /gene="yjeM"
                     /locus_tag="RHX79_004928"
     CDS             complement(6504..8006)
                     /gene="yjeM"
                     /locus_tag="RHX79_004928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418580.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/gamma-aminobutyrate family transporter
                     YjeM"
                     /protein_id="HDV2199965.1"
                     /translation="MPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIF
                     SALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVST
                     SAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARIT
                     AVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIF
                     AYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGS
                     VNLGNITYVLMKSLGVTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYS
                     PLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNK
                     LTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANV
                     FTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD"
     gene            complement(8225..9202)
                     /gene="epmA"
                     /locus_tag="RHX79_004929"
     CDS             complement(8225..9202)
                     /gene="epmA"
                     /locus_tag="RHX79_004929"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HDV2199966.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            9527..11335
                     /gene="frdA"
                     /locus_tag="RHX79_004930"
     CDS             9527..11335
                     /gene="frdA"
                     /locus_tag="RHX79_004930"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HDV2199967.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGVVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRLAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            11328..12062
                     /gene="frdB"
                     /locus_tag="RHX79_004931"
     CDS             11328..12062
                     /gene="frdB"
                     /locus_tag="RHX79_004931"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur protein"
                     /protein_id="HDV2199968.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            12073..12468
                     /gene="frdC"
                     /locus_tag="RHX79_004932"
     CDS             12073..12468
                     /gene="frdC"
                     /locus_tag="RHX79_004932"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HDV2199969.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            12479..12838
                     /gene="frdD"
                     /locus_tag="RHX79_004933"
     CDS             12479..12838
                     /gene="frdD"
                     /locus_tag="RHX79_004933"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HDV2199970.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            12901..14034
                     /locus_tag="RHX79_004934"
     CDS             12901..14034
                     /locus_tag="RHX79_004934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HDV2199971.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPPEEKNYAWG
                     YREGKAVHVSPGALDAETYGVKSTIEDMACWVRSNMNPRDINDKTLQQGIQLAQSRYW
                     QTGDMYQGLGWEMLDWPVNPDSIINGSGNKIALAAHPVKAITPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAAWQILNALQ"
     gene            14123..14656
                     /gene="blc"
                     /locus_tag="RHX79_004935"
     CDS             14123..14656
                     /gene="blc"
                     /locus_tag="RHX79_004935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin Blc"
                     /protein_id="HDV2199972.1"
                     /translation="MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRA
                     ALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(14653..14970)
                     /gene="sugE"
                     /locus_tag="RHX79_004936"
     CDS             complement(14653..14970)
                     /gene="sugE"
                     /locus_tag="RHX79_004936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter SugE"
                     /protein_id="HDV2199973.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(15145..15291)
                     /gene="ecnB"
                     /locus_tag="RHX79_004937"
     CDS             complement(15145..15291)
                     /gene="ecnB"
                     /locus_tag="RHX79_004937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HDV2199974.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(15402..15527)
                     /gene="ecnA"
                     /locus_tag="RHX79_004938"
     CDS             complement(15402..15527)
                     /gene="ecnA"
                     /locus_tag="RHX79_004938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HDV2199975.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(15579..16145)
                     /gene="efp"
                     /locus_tag="RHX79_004939"
     CDS             complement(15579..16145)
                     /gene="efp"
                     /locus_tag="RHX79_004939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDV2199976.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            16187..17215
                     /gene="epmB"
                     /locus_tag="RHX79_004940"
     CDS             16187..17215
                     /gene="epmB"
                     /locus_tag="RHX79_004940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HDV2199977.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITEALVERFARSTL
                     QILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQ"
BASE COUNT         4345 a         4596 c         4517 g         4019 t
ORIGIN      
        1 ccttggcaag gtcgtgctct accaactgag ctattcccgc gtactactta attttgcttt
       61 cgtaattttc gcatttctgc gtcgttacgg gaggcgcatt atacgagaaa tctttccctc
      121 tgcaaccccc ctaaaaaatt ttttttgagt ttttatctca agtgctgaaa ttatcagcaa
      181 gacgttcaat ttagcgtcaa tatcacgccg ccgcaagtgg attccggcgc ttacgtgacc
      241 agcaaaaatt ttacagcttg ataaaatgct cgcggtagta agccagctcc gccaccgatt
      301 cacggatatc atccatcgcc tgatgcgtcc cctgtttggt aaaaccatca agaatttccg
      361 gcttccagcg gcgcgccagc tctttcaggg tgctgacatc gagataacgg tagtggaagt
      421 aggcttccag ctccggcatg tatttaaaca ggaagcgacg atcctgaccg atgctgttac
      481 cgcaaatcgg cgatttaccc gcaggcaccc actgttttaa aaattcgagc gttgccagtt
      541 cagcttcacg atcgcccatc gtgctcgctt tcacgcgctc caccagcccg ctggcggtat
      601 gggtgcgcac gttccagtca tccatcagcg ccagctgttc atcggactgg tgtactgcaa
      661 tggtcggccc ttctgccaga atattcaggt tggcatcggt caccagcgtg gcaatctcaa
      721 taatgcgatc gcgctcggga tccagaccgg tcatctcaag atcgatccaa atcaggttgt
      781 tttcattggc actcatgcta ttttccaccc attcacagtg actatattga tccacaattg
      841 cgtgtatcat agatgttttg cccatcaggg gcgaccagga gtctgtacga ttgagtaaaa
      901 ataaactctc caaaggccag cagcgccgcg tgaacgccaa tcaccagcgt cgtcttaaaa
      961 cgtctaagga gaagcccgac tacgacgaca atctgtttgg cgagcctgat gaaggtatcg
     1021 tcatcagccg ctttggtatg cacgctgatg tggaatccgc cgatggcgac gttcaccgct
     1081 gcaatattcg ccgtaccatc cgttcgctgg tgaccggcga ccgcgtagtc tggcgtccgg
     1141 gtaaaccggc ggcggaaggc gtaaatgtca aagggatcgt ggaagcggtg catgagcgca
     1201 cctcggtgtt gacgcgtccg gatttctacg acggcgtgaa acctattgcc gccaacatcg
     1261 accagattgt cattgtctcc gccattttgc cggagctgtc gctcaatatt atcgaccgtt
     1321 atctggtggc ctgcgaaacc ttgcagattg agccgattat tgtgctcaac aagatagacc
     1381 tgctggacga cgaaggtatg gagttcgtca acgagcagat ggatatctac cgcaatatcg
     1441 gttatcgcgt attgatggtt tccagccata ctcaggatgg gctaaaaccg ctggaagagg
     1501 cgttgaccgg gcgcatcagc atttttgccg ggcagtctgg cgttggtaaa tccagcctgc
     1561 tgaacgcgtt gctggggctg caaaaagaga tcctgaccaa cgatgtctct gacaactcgg
     1621 ggctcggtca gcacaccacg accgccgcac gcctgtatca cttcccgcac ggcggtgatg
     1681 tgattgattc ccctggtgtg cgtgagttcg gcctctggca cctggagccg gaacaaatca
     1741 ctcagggctt tgtcgaattc catgactatt taggtctgtg taaatatcgc gattgcaaac
     1801 acgataccga tccgggctgc gctatccggg aagcggttga ggaagggaaa atcgcggaaa
     1861 cccgtttcga aaactatcac cgtattctgg aaagcatggc gcaggtaaaa acgcgtaaaa
     1921 acttttctga tacggatgac tgacaattaa gctaaccgtc gttagaatcg tccccttttt
     1981 ttcaggatcc ggcatgtagg ccggatcagg aacgacaaaa caatggcctg gaggctacct
     2041 tgttaaattc atttaaactt tcgctacagt acattctgcc gaaactatgg cttactcgcc
     2101 tggcgggttg gggcgcaagc aagcgggcag gatggctgac aaaactggtt atcgatctgt
     2161 tcgttaaata ctacaaggtc gacatgaaag aggcgcaaaa gccggacacc gccagctacc
     2221 gcacctttaa cgaattcttt gtccgtccgc tgcgtgacga agtacgccca atcgataccg
     2281 atccgaatgt cctggtcatg cctgccgatg gcgttatcag ccagttgggt aaaatcgaag
     2341 aagataaaat cctgcaagcc aaaggccaca actacagcct cgaagccctg ctggcaggca
     2401 actatctgat ggcggacctg ttccgcaacg gtacgtttgt gaccacttac ctctccccgc
     2461 gtgactacca tcgcgtacac atgccgtgca acggtattct gcgtgagatg atctacgtac
     2521 cgggcgatct cttctccgtt aaccatctca cggctcagaa cgtgccgaat ctgtttgccc
     2581 gtaacgaacg cgtgatttgc cttttcgata ccgaatttgg cccgatggcg cagattctgg
     2641 tcggggcgac gattgtaggc agcattgaga cggtctgggc gggcaccatt acgccgccgc
     2701 gcgaaggtat catcaagcgc tggacctggc ctgccgggga aaacgacggt tctgtggcac
     2761 tgctgaaagg ccaggaaatg gggcgcttta aactcggctc taccgttatc aacctgtttg
     2821 caccaggtaa agtgaacctg gttgagcaac tggaaagcct gtctgttacg aaaattggtc
     2881 agccgctggc agtatctacc gaaacctttg ttacgccaga cgctgaaccg gccccgcttc
     2941 ctgctgaaga gatcgaagca gaacacgacg ccagcccatt ggttgacgat aaaaaagacc
     3001 aggtctaatc catcaaagga aacgctgacg tgcgcctgat tatcactttt ctgatggcct
     3061 ggtgcctcag ttggggggcg tacgccgcga cggcccccga tagcaaacaa atctcacaag
     3121 aactggagca ggcaaaagcg gcgaaacccg cgcagccgga agtcgtagag gcgctccagt
     3181 ccgccttaaa tgcgcttgag gaacgaaaag gttcccttga gcgcatcaag caatatcaag
     3241 aagtcattga taattacccg aaactttccg ctactctgcg cgcacaatta aacaatatgc
     3301 gtgacgaacc gcgcagcgtg tcgccgggga tgtctaccga cgcgctgaat caggaaattc
     3361 tccaggtcag cagccagttg ctggataaaa gccgtcaggc ccagcaagag caggagcgcg
     3421 cccgcgagat tgccgattcg ctgaatcaac tgccgcaaca gcaaaccgac gcccgccgtc
     3481 agttaaatga gatcgagcgc cgcctgggaa cgcttactgg caataccccg ctcaatcagg
     3541 cacaaaattt cgcgttgcag tctgactccg cacgcctgaa agcgctcgtt gatgaactgg
     3601 aactggcgca gctgtctgcc aataaccgtc aggaattagc gcgcttacgc tcagagctgg
     3661 cggaaaaaga gagccagcaa ctggatgcgt atttgcaggc cttacgtaat cagttgaaca
     3721 gccaacgtca gcttgaggcg gagcgggcgc tggaaagtac cgaattgctg gcagaaaaca
     3781 gcgccgattt gccgaaagac atcgtcgcgc aattcaaaat taaccgcgaa ctatcggcgg
     3841 cactgaatca acaggcgcag cggatggatc tcgttgcctc gcaacagcgc caggccacca
     3901 gccagacgtt acaggttcgg caggcgctga atacgctgcg tgaacagtcg caatggctgg
     3961 gatcgtccaa cctgctcggc gaagcgttgc gggcgcaggt ggcacggctg ccggaaatgc
     4021 cgaaaccaca acagcttgat accgaaatgg cgcagttgcg tgtgcaacgg ttacgttatg
     4081 aggatctgct taataaacag ccgctgctac ggcaaatcca tcaggccgac ggtcagccgc
     4141 tgaccgccga gcaaaaccgt attctggaag cacaactgcg cactcagcgt gagttgctga
     4201 actcattgtt gcagggtggc gacacgctac tactggaact gaccaagctg aaagtctcca
     4261 acgggcaact ggaggatgcg ctgaaagagg tgaacgaagc aacgcaccgc tatctgttct
     4321 ggacctctga cgtgcgcccg atgaccatcg cctggccgct ggaaatcgcc caggatctgc
     4381 gtcgtctcat ttcgctggac accttcagtc agttgggcaa agccagtgtg atgatgctga
     4441 ccagcaaaga gacgattttg ccgctgtttg gcgcgttgat tctggtcggt tgcagtattt
     4501 actcgcgccg ctatttcacc cgttttcttg aacgttcggc ggcgaaagtc ggcaaagtga
     4561 ctcaggatca cttctggctg acgttgcgca ctcttttctg gtcgattctc gtcgcgtcac
     4621 cgctgccggt gctgtggatg acgctgggtt acggcttgcg cgaggcgtgg ccttatccgc
     4681 tggcggtcgc gattggcgat ggcgtaacag ccaccgtgcc gctgctgtgg gtagtgatga
     4741 tttgcgctac ttttgcccgc ccaaacggct tgtttatcgc tcattttggc tggccgcgcg
     4801 aacgggtttc ccgtgggatg cgctactacc tgatgagcat cgggcttatt gtgccactga
     4861 ttatggcgct gatgatgttc gataacctcg acgaccgcga gttttccggt tcgctgggac
     4921 ggctttgctt tatcctcatt tgcggtgcgc tggcggtggt caccctcagc ctgaaaaagg
     4981 ccgggatccc gctgtatctc aacaaagaag gcagcggcga caacattacc aaccatatgc
     5041 tgtggaacat gatgattggc gcgccactgg tcgccattct ggcgtcagcg gtgggttatc
     5101 tggcaacggc gcaggcactg ttagcgaggc ttgaaacctc ggttgccatc tggttcctgc
     5161 tactggtggt ttatcacgtt atccgccgct ggatgctgat ccagcgtcgc aggctggcgt
     5221 ttgaccgggc gaagcatcgc cgggcagaga tgttagcgca acgcgcgcgt ggcgaagagg
     5281 aagcgcatca tcacagtagc ccggaagggg caattgaagt cgatgaaagc gaagtcgatc
     5341 tcgatgccat cagtgcgcaa tccttgcggc tggtgcgctc aattttgatg ttgatcgccc
     5401 tgctttctgt cattgtgctg tggtcagaaa tccattccgc tttcggcttc ctcgaaaata
     5461 tttcgctgtg ggatgtcacc tccacggtac agggcgtaga aagtctggag ccaattaccc
     5521 tcggtgcggt gctgattgcc attctggtgt ttatcatcac cacgcagctg gtgcgcaacc
     5581 tgcccgcgct gctggaactg gcgattttgc agcacctgga tttaacgccg ggtacgggct
     5641 acgccatcac caccatcacc aaatatctgc tgatgctgat tggcgggctg gtcggcttct
     5701 cgatgattgg tattgagtgg tcgaaattgc agtggctggt tgccgcgctc ggtgttggtc
     5761 tcggttttgg tttgcaggag attttcgcca actttatctc tggcctgatt atcctgttcg
     5821 aaaaaccgat tcgcattggc gatacggtaa cgatccgcga tcttaccggt agcgtgacga
     5881 aaattaacac ccgcgccacc accatcagcg actgggaccg taaagagata atcgtgccga
     5941 acaaggcgtt tattaccgag cagtttatca actggtcgct ctctgactcg gtcacgcgcg
     6001 tggtgttgac gataccggcc cctgccgatg ccaatagcga agaagtgacg gaaatcctgc
     6061 tcaccgcagc gcgtcgctgc tcgctggtga tcgacaaccc ggcaccggaa gtcttcctgg
     6121 tggatctgca acaggggatt cagattttcg agctgcgtat ttacgccgct gagatgggtc
     6181 accgtatgcc gctacgccat gagatccacc agctgattct ggcaggcttc cacgcccacg
     6241 gtatcgatat gccattcccg cccttccaga tgcgtctgga aagcctcaac ggtaagcaaa
     6301 cggggagaac attaacttct gcgggcaaag gtcgtcaggc gggaagtttg taatgcatga
     6361 agctgccaaa tgatgtcaac gtggctcatt tagcagctta acatcatctt cagttatcac
     6421 cggccctgga gagtatcatc catacgcatt acttcctgac aactcatcgc cggagagacg
     6481 atgagttgca ggatttcata tgatcagtcg agagctaact caggtttatt cgccatgcga
     6541 ctgcaatagt tctggtaaat cgccatcgct aacagcgaga agaagacagg gccgccaatc
     6601 atccacaatg tgctgtccca gtctccggct tcaaccacag gttgaatgat ggtgaagacg
     6661 ttcgcaaatg tcaccaccag tacgacaacc accgtcgcaa tcattgccga catacgcgtt
     6721 ttgaaaatca caaatggtct gtcgagatcc tgacgtgctt taaagaatgg gaaagccagc
     6781 gcgaggaaca ggtaaggaag cgtcatagac acgttcgcca tcagcgtcag cttgttaaag
     6841 aacgcggatg cggtaccgcc accaaacgaa accagcagga tgaagacagt aaccaacccg
     6901 cactgcatcc acatggcgat agacggcatc cccatcgcat tcaggcgcgt catcggttcc
     6961 ggccacaacg ctttcggcgt cccctggatg atggctttca gcggtgaata gcaaagcgta
     7021 aagaacgcac cggtataagc gaggaacatc gaaagtccgg taatacgcgc aaaccatacg
     7081 cccagcgaca atgacgcttc aggtgacaaa tgcagtgcgt tacccagcgt caccccgagg
     7141 ctcttcatca gcacataggt aatattgcca aggttaacgg aaccattact taatacctgc
     7201 tgccagtttg tgctgacacc ccataaaaat attgccagcg aataaccgat tgaaataaca
     7261 atagcggcaa aaacaatacc tttggcaaag ttcttttctg gattttccgt tttatcgacc
     7321 agaccaccaa ccgcttcaat tccgccatag gcaaaaatag caaataccac aaacgatagc
     7381 attgccagac cggactgata acctgggttc ggtgatgcaa ggaaattaat atcctgcgcg
     7441 aaatgcccac catttaataa caaaatagta atgcttacta acagcaatac taaattcaga
     7501 cacattactg caataccgcc caccgcagta atgcgggcaa ttttattaat cccctttgaa
     7561 gcaacgacgg tgaccagaat catccatgcc actgccagca gaccaaccac ctgcgtaggc
     7621 tccagtccag caatacgcca gtgctgggtc atgtcgctac catagaggaa tgttgagaac
     7681 ggtacccaaa ctttcgcgga ggtactcacc atccagatga tataagagga aaaccacata
     7741 aacgtaccaa tgaaggcaaa acgtggtccg acactattat tcatccagga atagatacca
     7801 ccttcttctt tgcgataagc agctcccatt tcagccatca ttaaggcgaa tggaataaag
     7861 aataacaatg cagaaaatat ataaaaggga atcgcactat aacccattaa gtaataagcc
     7921 gatgggctat tggcaaatcc aaatacggaa gtaaagatca tcaatatgag tcctatcaga
     7981 ctcatctttt ttatcgtgtg aggcatgaaa ccatccttca tttcagcgcg tgtataacac
     8041 gtgcccactg aactgcactg cgcaacattg agcaggcagc gtaaaaacca atacagaatt
     8101 gatacctgga tgatatcaaa tatccagtct taaattgtgg cctttaacgg aaaaatgaaa
     8161 acatatgcta cagaatggcg cttatcacgc cattcttcgc tgttaattca gtaatttttc
     8221 agaattatgc ccggtcaacg ctaaaggcga tgacttcagc cagtgtctcc gcgcccagcg
     8281 ccaacatcac cagacgatca acacctaatg ccacgccgga acagtcaggc ataccgactt
     8341 tcaaggcttc aatcagattc tggtcaatgg ggtgctgcgg caaaccgcgc gccgcgcgct
     8401 tacggttatc ttgttcaaag cgttgttgct gctcacgggc atccgtcaat tcatggaaac
     8461 cattcgccag ctcaatacct ttataataaa cctcaaagcg ttcagcgacc cgatgatctt
     8521 cggtactgat ttgcgccagt gatgcctggc tggctggaaa gtggtacaca aaggtcggtt
     8581 tttctttgcc aatatttggc tctacgccaa aggtaaacag caattgtagc agcgtgtcgc
     8641 ggtcttcttc ggtatcagca acattgctca aatccagttt cgctgcgact tcccgcagtt
     8701 gcgttttgtc ggcagagagc gggtcaattt ccagataacg caagaaagct tgttgataag
     8761 aaaggctttc tgctgccggg cagtccagca cctgttgtaa gagatcgtcc acctcgttca
     8821 tcaaccggta catatcatag tgcggtcgat accactccag catagtgaac tcagggttgt
     8881 gataacgccc catctcttca ttacggaagc tgcggcacag ctggaatacc ggcccacaac
     8941 cggcaaccag caggcgtttc atatggtatt ccgggctggt cattaaccag agattcatcc
     9001 cctgcgaatg cccggggcca acgaaacgtg tctcaaacgg gaccaaatga atatcggtta
     9061 ccgtcgcctg gctcatacaa ggcgtctcca cctccagcac tccacgatcg gcaaagaaac
     9121 gacggatctc cgccataatc gccgcgcgtt ttaataagtt aggaatggat gcgctcggct
     9181 gccaggatgc cgtttcgctc atagttaaat ctccagtttt tgacaagggc acgaagtcta
     9241 ctcgcaacgc gacggcgaga caaattttac gcaggaatca aacagcggtg ggcagtgact
     9301 aaaaaaagca cgatctgatg gtttagtaat taaattaatc atcttcagtg ataatttagc
     9361 cctcttgcgc actaaaaaaa tcgatctcgt caaatttcag acttatccat cagactatac
     9421 tgttgtacct ataaaggagc agtggaatag cgttcgcaga ccgtaacttt caggcactta
     9481 ccctgaagta cggggctgtg ggataaaaac aatctggagg aatgtcgtgc aaacctttca
     9541 agccgatctt gccattgtag gcgccggtgg cgcgggatta cgtgctgcaa ttgctgccgc
     9601 gcaggcaaat ccaaatgcaa aaatcgcact aatctcaaaa gtatacccga tgcgtagcca
     9661 taccgttgct gcagaagggg gctccgccgc tgtcgcgcag gatcatgaca gcttcgaata
     9721 tcactttcac gatacagtag cgggtggcga ctggttgtgt gagcaggatg tcgtggatta
     9781 tttcgtccac cactgcccaa ccgaaatgac ccaactggaa ctgtgggggt gcccatggag
     9841 ccgtcgcccg gatggtagcg tcaacgtacg tcgcttcggc ggcatgaaaa tcgagcgcac
     9901 ctggttcgcc gccgataaga ccggcttcca tatgctgcac acgctgttcc agacctctct
     9961 gcaattcccg cagatccagc gttttgacga acatttcgtg ctggatattc tggttgatga
    10021 tggtcatgtt cgcggcgtgg tagcaatgaa catgatggaa ggcacgctgg tgcagatccg
    10081 tgctaacgcg gtcgttatgg ctactggcgg tgcgggtcgc gtttatcgtt acaacaccaa
    10141 cggcggcatc gttaccggtg acggtatggg tatggcgcta agccacggcg ttccgctgcg
    10201 tgacatggaa ttcgttcagt atcacccaac cggtctgcca ggttccggta tcctgatgac
    10261 cgaaggctgc cgcggtgaag gcggtattct ggtcaacaaa aatggctacc gttatctgca
    10321 agattacggc atgggcccgg aaactccgct gggcgagccg aaaaacaaat atatggaact
    10381 gggtccacgc gacaaagttt ctcaggcctt ctggcacgaa tggcgtaaag gcaacaccat
    10441 ctccacgccg cgtggcgatg tggtttatct cgacctgcgt cacctcggcg agaaaaaact
    10501 gcatgaacgt ctgccgttca tctgcgaact ggcgaaagcg tacgttggcg tcgatccggt
    10561 taaagaaccg attccggtac gtccgaccgc acactacacc atgggcggta tcgaaaccga
    10621 tcagaactgt gaaacccgca ttaaaggtct gttcgccgtg ggtgaatgtt cctctgttgg
    10681 tctgcacggt gcaaaccgtc tgggctccaa ctccctggcg gaactggtgg tcttcggccg
    10741 tctggccggt gaacaagcga cagagcgtgc agcaactgcc ggtaatggca acgaagcggc
    10801 aattgaagcg caggcagctg gcgttgaaca acgtctgaaa gatctggtta accaggatgg
    10861 cggcgaaaac tgggcgaaga tccgcgacga aatgggtctg gctatggaag aaggttgcgg
    10921 tatctaccgt acgccggaac tgatgcagaa aaccatcgac aagctggcag agctgcagga
    10981 acgcttcaag cgcgtgcgca tcaccgacac ctccagcgtg ttcaacaccg acctgctcta
    11041 caccattgaa ctgggccacg gtctgaacgt tgctgaatgt atggcgcact ccgcaatggc
    11101 acgtaaagag tcccgcggcg cacaccagcg tctggacgaa ggttgcaccg agcgtgacga
    11161 cgtcaacttc ctcaaacaca ccctcgcctt ccgcgatgct gatggcacga ctcgcctgga
    11221 gtacagcgac gtgaagatta ctacgctgcc gccagctaaa cgtgtttacg gtggcgaagc
    11281 ggatgcagcc gataaggcgg aagcagccaa taagaaggag aaggcgaatg gctgagatga
    11341 aaaacctgaa aattgaggtg gtgcgctata acccggaagt cgataccgca ccgcatagcg
    11401 cattctatga agtgccttat gacgcaacta cctcattact ggatgcgctg ggctacatca
    11461 aagacaacct ggcaccggac ctgagttacc gctggtcctg ccgtatggcg atttgtggtt
    11521 cctgcggcat gatggttaac aacgtgccaa aactggcatg taaaaccttc ctgcgtgatt
    11581 acaccgacgg tatgaaggtt gaagcgttag ctaacttccc gattgaacgc gatctggtgg
    11641 tcgatatgac ccacttcatc gaaagtctgg aagcgatcaa accgtacatc atcggcaact
    11701 cccgcaccgc ggatcagggt actaacatcc agaccccggc gcagatggca aagtatcacc
    11761 agttctccgg ttgcatcaac tgtggtctgt gctacgccgc gtgcccgcag tttggcctga
    11821 acccagagtt catcggtccg gctgccatta cgctggcgca tcgttataac gaagatagcc
    11881 gcgaccacgg taagaaggag cgtatggcgc agttgaacag ccagaacggc gtatggagct
    11941 gtactttcgt gggctattgc tccgaagtct gcccgaaaca cgtcgatccg gctgcggcca
    12001 ttcagcaggg caaagtagaa agttcgaaag actttcttat cgcgaccctg aaaccacgct
    12061 aaggagtgca acatgacgac taaacgtaaa ccgtatgtac ggccaatgac gtccacctgg
    12121 tggaaaaaat tgccgtttta tcgcttttac atgctgcgcg aaggcacggc ggttccggct
    12181 gtgtggttca gcattgaact gattttcggg ctgtttgccc tgaaaaatgg cccggaagcc
    12241 tgggcgggat tcgtcgactt tttacaaaac ccggttatcg tgatcattaa cctgatcact
    12301 ctggcggcag ctctgctgca caccaaaacc tggtttgaac tggcaccgaa agcggccaat
    12361 atcattgtaa aagacgaaaa aatgggacca gagccaatta tcaaaagtct ctgggcggta
    12421 actgtggttg ccaccatcgt aatcctgttt gttgccctgt actggtaagg agcctgagat
    12481 gattaatcca aatccaaagc gttctgacga accggtattc tggggcctct tcggggccgg
    12541 tggtatgtgg agcgcaatta ttgcgccggt gatgatcctg ctggtgggta ttctgctgcc
    12601 actggggctg tttccgggtg atgcgctgag ctacgagcgc gttctggcgt tcgcgcagag
    12661 cttcattggt cgcgtattcc tgttcctgat gatcgttctg ccgctgtggt gtggtttaca
    12721 ccgtatgcac cacgcgatgc acgatctgaa aattcacgtg cctgcgggca aatgggtttt
    12781 ctacggtctg gctgctatcc tgacagttgt cacgctgatt ggtatcgtta caatctaacg
    12841 tatcgccaat gtaaatccgg cccgcctatg gcgggccgtt ttgtatggaa accagacctt
    12901 atgttcaaaa cgacgctctg cgccttatta attaccgcct cttgctccac atttgctgcc
    12961 cctcaacaaa tcaacgatat tgtgcatcgc acaattaccc cgcttataga gcaacaaaag
    13021 atccccggta tggcggtggc ggtaatttat cagggtaaac cttattactt tacctggggc
    13081 tatgcggaca tcgccaaaaa gcagcccgtc acacagcaaa cgttgtttga gttaggttcg
    13141 gtcagcaaaa catttacggg cgtgcttggt ggcgacgcta ttgctcgagg ggaaatcaag
    13201 ttaagcgatc ccgcaacaaa atactggcct gaacttaccg ctaaacagtg gaatgggatc
    13261 acactattac atcttgcgac ctacaccgct ggcggcctgc cattgcaggt gccggatgaa
    13321 gtgaaatcct caagcgactt gctgcgcttc tatcaaaact ggcagcctgc atgggctcca
    13381 ggaacacaac gtctgtatgc caactccagt atcggtttgt tcggcgcact ggctgtgaag
    13441 ccgtctggtt tgagttttga gcaggcgatg caaactcgtg tcttccagcc actcaaactc
    13501 aaccatacgt ggattaatgt acctccccca gaagaaaaga attacgcctg gggatatcgc
    13561 gaaggcaagg cagttcatgt ttcgccaggg gcgttagatg ctgaaactta tggtgtgaag
    13621 tcgaccattg aagatatggc ctgctgggta cgaagcaata tgaatccccg tgatatcaac
    13681 gacaaaacac ttcagcaagg gatacaactg gcacaatctc gctactggca aaccggcgat
    13741 atgtatcagg gcctgggctg ggaaatgctg gactggccgg taaatcctga cagcatcatt
    13801 aacggcagtg gcaataaaat tgcactggca gcacaccctg taaaagcgat tacgccccca
    13861 actcctgcag tacgcgcatc atgggtacat aaaacagggg caaccggcgg atttggtagc
    13921 tatgtcgcgt ttattccaga aaaagagctg ggtatagtga tgctggctaa caaaaactat
    13981 cccaatccag cgagagtcgc cgccgcctgg cagattctca acgctctaca gtaaaatttc
    14041 atcgggtccg aattttcgga ccttttctgc gcttttcctt gctgtcatct acacttagaa
    14101 aaaaaccagt aaggaaacat ttatgcgcct gctccctctc gttgccgcag cgacagctgc
    14161 atttctggtc gttgcctgca gttctcctac gccgccgcgt ggcgtaacag tagtgaataa
    14221 tttcgacgca aaacgttatc tcggtacctg gtatgagatt gcccgttttg atcaccgttt
    14281 tgaacgtgga ctggaaaaag tcaccgcaac atacagtctg cgtgatgacg gcggcctgaa
    14341 tgtcatcaat aaaggctata accctgacag agaaatgtgg cagcagagtg aagggaaagc
    14401 gtactttacc ggcgcaccaa cacgcgctgc gctgaaagtg tcattctttg gtcctttcta
    14461 tggcggttat aacgtcattg cacttgatcg ggaataccgc catgcgctgg tttgcggccc
    14521 ggaccgcgac tacctgtgga tactctcccg cacgccaacc atttctgacg aagtgaaaca
    14581 ggagatgctg gcagtcgcga cccgggaagg gtttgatgtc agtaagttta tttgggtaca
    14641 gcagcccggt agttagtgag tgctgagttt cagaccaata atccccaata cgattaacgc
    14701 cagactcgcc aggcgcatcg ggttagcgga ctcaccgagc agcacaatgc cggtgatggc
    14761 cgcgccgact gcgccaatac ccgtccacac ggcataagcc gtccctactg gtaacgattt
    14821 catcgcccag gcaagtagcg ccatactgac tatcatcgcc gtcacggtaa taacactcgg
    14881 cgtcaaacgg ctaaagccgt gggtatattt caggccaacg gcccatacca cttccagcag
    14941 accagcaata actaagataa tccaggacat atcaggctcc ggagaattgg ggccgtcccc
    15001 ggtgaaaaga ggcgtttgca ggtcgtcctg caaagctgat ggttgaacgg atattttgcc
    15061 aggtggcagg ggaatttcaa ctattacctt tgtgactatc gcaaaaaaac aaacggcacg
    15121 acataactgt cgtaccgtta ttgcttattg ctgcgctttc gttgctgcac cagaaatcgc
    15181 gttaccgcca tcagaaatgt cttcaccaac gccacgcgtg gtgttgcagg cagttaatac
    15241 tgttgaaagc accagaacag aaaagatcgc tgcaattgtc ttcttcacca taacgtcttc
    15301 cttttaggta atgttattta tgtttgccta tagcaaatta ataatagaca acatcgccaa
    15361 aaatgatgga aatctgatga tttttcggaa gagaagaaaa attagctggc agcgcgggag
    15421 atggagttgc cgagatgttt gatgtcttcg ccgaaaccgc gagcggtgtt acagcccgtg
    15481 agcagcgtgc tggcaagcaa aacaagaacg ataaggcgtt tcatcatctc tgacctgaat
    15541 aagtgatggt gcagcctgca ggccgcacca caaccgcatt acttcacgcg agagacgtat
    15601 tcaccagagc gggtatccac tttgatgact tcgccgattt gtacgaacag cggaacttta
    15661 accacagcgc cagtagacag ggtagccggt ttgccgccag tacctgcggt atcacctttc
    15721 aggcccggat cggtatcaac gatttccagt tcaacgaagt tcggcggagt aacggagatc
    15781 ggctgaccat tccacagagt tacgatacac tctgcctgat ccagcagcca tttagcgttg
    15841 tcgccaattg cttttgcatc agcagacagc tgctcgaaag tttcgttgtt catgaagtgc
    15901 cagaactcac cgtcgttgta caggtaagtc aggttcatat cgacaacatc agcgccttca
    15961 gcggaatcag tagatttgaa ggttttttct acgcgagtac cggtcagcag acgacgcagt
    16021 ttaacgcgag caaatgcctg gcctttaccc ggttttacga attcactcgc ttcaaccgcg
    16081 taaggttcgc cgtctaacat gattttaaga ccagcacgaa aatcgttgct atagtacgtt
    16141 gccataaggc cctctgaaat ttgttaattg gtagctaagc cacaaaatgg cgcatattgt
    16201 aaccctaaat accccatcca gagaagattg gttaacgcaa cttgccgatg ttgtgaccga
    16261 tcctgatgaa cttctgcgtc ttttgaatat agacgcggac gaaaaactgt tggccggacg
    16321 cagcgccaaa aagctgtttg ccctgcgtgt gccccgctca tttatcgatc gcatggagaa
    16381 aggcaatccg gacgatcctc ttttgcgtca ggtacttacc tcgcaagatg agtttgtcgt
    16441 cgcgtccgga ttctccaccg acccgctgga agaacagcac agcgtagtgc ctggtttgtt
    16501 gcataaatac cacaaccggg cgcttttgct ggtcaaaggc ggctgcgcgg taaattgccg
    16561 ctattgcttc cgtcgccact tcccctatgc cgaaaatcag ggcaacaagc gtaactggca
    16621 gactgctctt gagtatgttg ctgcgcatcc ggaactggac gagatgattt tctccggcgg
    16681 cgatccgctg atggcgaaag atcacgagct ggactggttg ctcacacaac tggaagccat
    16741 cccgcatatc aaacgtctgc ggattcacag ccgtctgccg attgtgatcc cggcacgtat
    16801 caccgaggcg ctggttgaac gctttgcccg ttctacgctg caaatcttgc tggtgaatca
    16861 catcaatcat gccaatgagg tagatgaaac gttccgtcag gcgatggcta aattgcgccg
    16921 tgtcggtgtc accctgctta accagagcgt tctgttacgt ggtgtgaacg ataacgcaca
    16981 aacgctggca aacctgagta atgcgttgtt cgatgccggc gtaatgccgt attacctgca
    17041 tgtgctcgat aaagtacagg gcgcggcgca ttttatggtg agtgatgacg aagcacggca
    17101 gattatgcgt gagttgctga cactggtgtc gggatatctg gtgccgaaac tggcgcgaga
    17161 aattggcggc gaacccagca aaacgccgct ggatctccag ctacgccagc agtaactgat
    17221 taaacaggga agtcaaacat taaaattgcc tgatgcgcta cgcttatcag gcctacatcg
    17281 tgcattgaaa ttgaatggat ttgcaatgaa ctgtaggccg gataaggcgt ttacgccgca
    17341 tccggcaaga gcaacaaacg caagtacagc aacctgtcat taaactggga aatttaatct
    17401 ttgcccgttg cataaccttt aattattcat atacattgct gttgttactc tttatataac
    17461 taacaccaat aattaac
//
LOCUS       DAPGWB010000469        12667 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.guided.129, whole genome shotgun sequence.
ACCESSION   DAPGWB010000469 DAPGWB010000000
VERSION     DAPGWB010000469.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 12667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12667
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.guided.129"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            56..829
                     /locus_tag="RHX79_004941"
     CDS             56..829
                     /locus_tag="RHX79_004941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308281.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDV2199978.1"
                     /translation="MHDQPLLSMSLPSIPSFVLSGLLLLCLPFSSFASATTSHITFSY
                     AARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLK
                     ASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVF
                     YAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDG
                     QFIESPRTGETIRVSQLAEPFWQDHFLGARRILTEETIL"
     gene            complement(886..1242)
                     /locus_tag="RHX79_004942"
     CDS             complement(886..1242)
                     /locus_tag="RHX79_004942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDV2199979.1"
                     /translation="MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSI
                     EALYREGESALDEWMADCEEDGIAPFREEEEQKRLTLRVPHHIDSRLTIVARQHSISK
                     NQLIVDVLEREFSAQM"
     gene            complement(1235..1513)
                     /locus_tag="RHX79_004943"
     CDS             complement(1235..1513)
                     /locus_tag="RHX79_004943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000598761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDV2199980.1"
                     /translation="MIKVSALGSRHRKTFDDVMTEPPKSGIKWDDVVALIKAVGGTIK
                     NNNGSRRKFQIGTTKFSTHEPHPKNVMDKGAVAGLKEWFVNCVGVDYE"
     gene            complement(1618..3330)
                     /locus_tag="RHX79_004944"
                     /pseudo
     CDS             complement(1618..3330)
                     /locus_tag="RHX79_004944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001140831.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
     gene            3302..4087
                     /gene="lafU"
                     /locus_tag="RHX79_004945"
     CDS             3302..4087
                     /gene="lafU"
                     /locus_tag="RHX79_004945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706230.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lateral flagellar export/assembly
                     protein LafU"
                     /protein_id="HDV2199981.1"
                     /translation="MTTIKLIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSH
                     PPKPATVAVPEETEKKARDVNEKTVLLKKKSATELGELATSINTIARDAHMEANLEME
                     IVPQGLRVLIKDDQNRNMFERGSAQIMPFFKRLLVELAPVFDSLDNKIIITGHTDAMA
                     YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRI
                     EIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRTR"
     gene            4158..5213
                     /gene="dinB"
                     /locus_tag="RHX79_004946"
     CDS             4158..5213
                     /gene="dinB"
                     /locus_tag="RHX79_004946"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDV2199982.1"
                     /translation="MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTA
                     NYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSL
                     DEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNG
                     QFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKF
                     GRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAK
                     VKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGL
                     HVTLLDPQMERQLVLGL"
     gene            5210..5662
                     /locus_tag="RHX79_004947"
     CDS             5210..5662
                     /locus_tag="RHX79_004947"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV2199983.1"
                     /translation="MNNIQIRDYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQI
                     DESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDMLFVDPEYTRRGVASALLKPLIK
                     SESELTVDASITAKPFFERYGFQTVKQQRVECRGEWFINFYMRYKQQH"
     gene            5908..7047
                     /locus_tag="RHX79_004948"
     CDS             5908..7047
                     /locus_tag="RHX79_004948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000521550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HDV2199984.1"
                     /translation="MGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVG
                     MPDLHPGRGYPIGAAFFSVGRFYPALVGNDIGCGMALWQTDILTRKYNADKFEKRLSD
                     LDDVAEESWLEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDA
                     QHLQLLVHSGSRGVGQSILQRHIASFSHHGLPQGSDDALRYIAEHDDALAFACINRQM
                     IALRIMQQVKATGSPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDY
                     SWIVQPVANEKTLHSLAHGAGRKWGRTECKGRLAAKYTATQLSRTELGSRVICRDKQL
                     IFEEAPQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGKKG"
     gene            7044..7658
                     /locus_tag="RHX79_004949"
     CDS             7044..7658
                     /locus_tag="RHX79_004949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HDV2199985.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GHYSDTLRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(7715..9172)
                     /gene="pepD"
                     /locus_tag="RHX79_004950"
     CDS             complement(7715..9172)
                     /gene="pepD"
                     /locus_tag="RHX79_004950"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HDV2199986.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            9433..9891
                     /gene="gpt"
                     /locus_tag="RHX79_004951"
     CDS             9433..9891
                     /gene="gpt"
                     /locus_tag="RHX79_004951"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDV2199987.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            9983..11227
                     /gene="frsA"
                     /locus_tag="RHX79_004952"
     CDS             9983..11227
                     /gene="frsA"
                     /locus_tag="RHX79_004952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HDV2199988.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITGWIEKRLC"
     gene            11285..11686
                     /gene="crl"
                     /locus_tag="RHX79_004953"
     CDS             11285..11686
                     /gene="crl"
                     /locus_tag="RHX79_004953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HDV2199989.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(11725..>12667)
                     /gene="phoE"
                     /locus_tag="RHX79_004954"
     CDS             complement(11725..>12667)
                     /gene="phoE"
                     /locus_tag="RHX79_004954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HDV2199990.1"
                     /translation="KAMHYMSDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFA
                     GNKAESDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQT
                     DNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFG
                     GSDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTP
                     ITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYF
                     NKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF"
BASE COUNT         3059 a         3196 c         3279 g         3133 t
ORIGIN      
        1 taataatggt ttattaagtt tgttcaggta cgggccggga tacactgcaa catcaatgca
       61 tgatcagcca ttattgagta tgtccttgcc gtcgattccc tcttttgtgt tgtcgggatt
      121 actgttgctt tgcttgccgt tttcttcatt tgccagcgcc accacatcac atatcacttt
      181 cagctacgcc gcccgccagc ggatgcaaaa tcgtgcgcgt ttattaaaac agtaccaaac
      241 ccatctgaaa aaacaggcca gctatattgt ggaaggcaat gccgaaagca gaagggcgct
      301 acgccagcac aaccgcgaac agataaaaca gcatccagaa tggtttcctg cgccgctcaa
      361 ggcgagtgac agacgctggc aggcgctggc ggaaaacaac catttcttaa gcagcgacca
      421 tctgcataac atcaccgaag tggcgattca ccgtctggag caacagcttg gcaagcctta
      481 cgtctggggc ggtacgcggc ccgatcaagg cttcgactgt agcgggttag ttttttatgc
      541 ctacaacaag atccttgagg cgaaactccc acgcacggct aatgagatgt atcactatcg
      601 ccgggcaacc attgtggcga ataacgacct gcgccgggga gatttgctat ttttccatat
      661 ccacagccgc gagattgccg accatatggg ggtgtatctg ggcgacggtc agtttattga
      721 gtcaccgcgc accggggaaa ccattcgggt aagtcagtta gctgaacctt tctggcagga
      781 tcacttttta ggcgcgcggc ggattttgac ggaggagacg attttgtaaa tgggtaatat
      841 tgacgaactg gcaaaaggtc ggatgccacg cggcatccga cctgtttaca tctgggctga
      901 aaactcacgt tctaagacat caacaatgag ctggtttttt gaaatggaat gttgtctggc
      961 gacgatggtc agccgcgaat caatgtgatg aggaacacga agcgtcaggc gtttttgctc
     1021 ttcttcttca cgaaaagggg caataccgtc ctcttcacaa tccgccatcc actcatccag
     1081 cgcgctttcg ccttcacgat ataatgcctc aatacttgtg gctacaaagt cacaataacc
     1141 gtttacattg aggaacttgc cgcgaaatgc gttgatatcg gcttcaaatg ttactgcggc
     1201 tggttgacct ttaattgtga taatgttcga tgctttattc ataatctacc cctacacagt
     1261 taacaaacca ctccttaaga cctgctactg cgcctttatc catcacattt tttggatgtg
     1321 gctcatgtgt gctgaatttg gtcgttccaa tctgaaattt tcgtctggag ccgttgttat
     1381 tttttattgt tccacccaca gctttaatga gtgcaacaac atcatcccat ttaattccag
     1441 attttggcgg ctccgtcatt acatcgtcga atgtttttct atgacgagaa cctagcgcgc
     1501 tgaccttaat catactatca atccatgacg tcattgtatg gtgtcatcgt agtctctttg
     1561 cagtgtgacg tcaattaatg gtgtcaggtg ctgcaaagca tggaaaagaa tcccccatca
     1621 actcaacgcc cccataatct tcaactccag ctcatccggc acttcgttat acgacagcac
     1681 atgcagcccc ggcgcaaaca accttgcata acgcgccagc aaagggcgca gctgcggtgg
     1741 caccagcagc accgggtctt tccccgccgc tttcatctgc tctttcacct gtggcatcgt
     1801 actctggaac tggttgagca tattcgggtc cactggcacg ctgtcgagca tcactttacc
     1861 gccctgttgc gcctgattca ctaggttagt cagcagattt tccagctcat tattcagggt
     1921 atacaccgtc agctcctgct tgcgaacgaa cggatgggta atgctgcgcc gcagcgccag
     1981 gcgcacatcg gctgccagca gaatatgatc tttggtcacc gcgctactgg cgaccagcac
     2041 ggtggcgatg gtgacgatat cgcgcaggga aacgccttcg gtcagcagcg cccggtacac
     2101 tttcagcaac tggctgtaat tgagcaccgc gcttaaatcc tccgccaggc gcggtgccat
     2161 cgacgccaaa cggttatgca actgcgtaat atcgtcatag ttaaataaat caggaatata
     2221 gctgcgcaca atcttattta catgggtagc aatcacgctg gcgctgtcga tcacctgata
     2281 ccccatattc agcgccttcg ctttctgcgc aggctggatc caggtcaccg gcatcccgta
     2341 cgccgggtca ttccccagca cgccgtctat ctcgccgtag gtttcgctgg agggcagcgc
     2401 catcagttta tccgccggaa tatccgcttc atcagcctta atgccgttga tgaaaatagc
     2461 gtactggctg ggcttaaggc ggaagttttc ccgaatgcgg atctccggca gcagcacgcc
     2521 gttgccgtcg gatatcacct gtcgcacgcc gcgaatacgc tgggtgagcg ggttgccctg
     2581 ggctttgtcc accagcgcca ccagcttgta gccgaggctt aagctgatgg gctcgatcag
     2641 cggaatggtt tcccaactga cctgttgctc gctggtttcg gtgatggtgc gggtcagcgt
     2701 ttcgagactt ttctcttccg cttccgccgc ctgcgggcgt ttgctcatcc gccagccggt
     2761 aaagccaagc agggcgctga acagcaaaaa cggcagatgt ggcattcccg gcactaccgc
     2821 cagtacgaac ataattccgg tagcggtgta gagcaccgac gggcttgcca gcaactggtt
     2881 acgcacgtca tgggcgatat cgccgttgtc gctgacgcgg gtgacgataa tcgccgccgc
     2941 ggtggagagt agcagggaag ggatttgcgc caccagcccg tcgccgatgg tcatcagcac
     3001 atactgctgg aaggcggcgt cggcgctcag gttgtatttg aagatcccga tacagacgcc
     3061 gccgatcagg ttgatcgcca gaatcatcat cccggcgata gcatccccgc gcacaaattt
     3121 cgatgccccg tccatcgcgc cgtagaaatc ggcctcgctg gcaacatctt tacgtcgggt
     3181 ttgtgcctgc gcctgattga tcaacccggc attaagatcg gcgtcaatcg ccatctgctt
     3241 accgggcatc gcatccaggg taaagcgggc tgaaacctcg gaaatacgct cggccccttt
     3301 ggtgacgaca ataaagttga ttgtcaacag cgtcagtaaa tccgagcgtg aaagcattat
     3361 cgccgcgctg cacgggcagt cgatttttaa cggtggtggg ctgtcgccgt taaataaaat
     3421 cagcccgtct catccgccaa aacctgccac cgtggcggtg ccggaagaga cggagaaaaa
     3481 agcgcgtgac gtcaatgaga aaacggtgct gctgaagaag aaatccgcca ccgagcttgg
     3541 cgagctggca accagtatca acaccattgc ccgtgatgcg catatggaag cgaatctgga
     3601 gatggagatt gtcccgcagg gattacgcgt gctgattaaa gacgaccaga atcgcaatat
     3661 gttcgaacgc ggcagcgcgc agattatgcc gttctttaaa aggctgctgg tggagctcgc
     3721 gccagttttc gactcgctcg ataacaaaat tattattacc gggcataccg atgcgatggc
     3781 ctacaaaaac aatatctaca acaactggaa cctttcgggc gatcgcgcgc tttcagctcg
     3841 tcgggtgctg gaagaggccg gaatgccgga agataaagtg atgcaggtaa gcgcaatggc
     3901 ggaccagatg ctgctggacg cgaaaaatcc gcaaagcgcg ggcaaccggc gcattgagat
     3961 tatggtgctg accaaaagtg cgtccgatac gctgtatcaa tactttggtc agcatgggga
     4021 taaagtggtg cagccgctgg tgcaaaagct ggataagcag caggtgcttt cacagcgaac
     4081 gcgctagatg ctgaatcttt acgcatttct caaaccctga aatcactgta tactttacca
     4141 gtgttgagag gtgagcaatg cgtaaaatca ttcatgtgga tatggactgc tttttcgcag
     4201 cggtggagat gcgcgacaat cccgccctgc gcgatatccc tattgctatt ggcggcagcc
     4261 gcgaacgtcg gggggtgatc agcaccgcca attatcccgc gcgtaaattt ggcgtacgta
     4321 gcgctatgcc gacagggatg gcgctcaaat tatgcccgca tctcaccttg cttccggggc
     4381 gctttgacgc ctacaaagaa gcctcaaatc atattcgcga aattttctcg cgctacacct
     4441 cgcgcattga accgttgtca ctggatgaag cctatctcga tgtcaccgat agcgtccatt
     4501 gccacggttc tgcgactctc atcgcccagg aaatccgcca gacgattttc aacgagctgc
     4561 aactgacggc atctgcgggc gtggcaccag taaagtttct cgccaaaatc gcctccgaca
     4621 tgaataaacc caacggtcag tttgtgatta cgccggcaga agttccggca tttttacaaa
     4681 ccttaccact ggcaaaaatc cccggcgtcg gcaaagtctc ggcggcaaaa ctggaagcga
     4741 tggggctacg aacctgcggt gatgtacaaa agtgtgatct ggtgatgctg cttaaacgct
     4801 ttggcaaatt tggccgcatt ttgtgggagc gtagtcaggg gattgacgag cgcgacgtta
     4861 acagcgaacg gttgcgaaaa tccgtcggcg tggaacgcac gatggcggaa gatatccacc
     4921 actggtctga atgtgaagcg attatcgagc ggctgtatcc ggaacttgaa cgccgtctgg
     4981 caaaggtgaa acctgattta ctgattgctc gccagggggt gaaattaaag ttcgacgatt
     5041 ttcagcaaac cactcaggag cacgtctggc cgcggctgaa taaagctgac ttaatcgcca
     5101 ccgcgcgtaa aacctgggat gaacgccgcg gcgggcgcgg tgtgcgactg gtggggctgc
     5161 atgtgacgtt gcttgacccg caaatggaaa gacaactggt gctgggatta tgaataacat
     5221 acaaataaga gactatcagc ctggcgattt tcagcaacta tgcgctattt tcattagagc
     5281 ggttacgatg actgccagtc agcattattc accacaacaa attgccgcct gggcgcagat
     5341 tgacgaatct cgctggaagg agaaactcgc gaaatcacaa gtgcgggttg cagtcattaa
     5401 tgcaaaactg gtcggcttta ttacctgcgt tgaacactat atcgatatgt tatttgttga
     5461 ccctgaatac acccgccgtg gggttgccag cgctttgtta aaacctttga ttaagtctga
     5521 atccgaactt acggtggacg caagcataac cgcaaaaccc ttttttgaac gttatggttt
     5581 tcagacagtt aagcagcaac gcgttgaatg tcggggagag tggtttatta atttttatat
     5641 gcgttataaa cagcaacatt aaatccagct tgcaatgaaa ataacgcaag cctagtatgt
     5701 gcgcgttttc ttattccaca aactgcaagg aggtaaatca tgacaaatcc tttatcaatg
     5761 actctttgca gacctttcca ggattaattc tttttttctt gccctggatt cgtctgccat
     5821 ttcctgattt tttaattgtt actctcaata attcaagtcg caacacatgc aacttgaagt
     5881 atgacgagtc tatttacgga atggtatatg ggcaattata ttcgtccctt atccgatgcg
     5941 gtatttacca tcgcatctga tgacctgtgg atcgagagtt tagcgatcca acaattacac
     6001 accacggcaa atttacccaa catgcagcgc gtagtgggga tgccagattt acatcccgga
     6061 cgcggctatc cgattggcgc agcgttcttc tctgttggtc gtttttatcc ggcactggtc
     6121 ggcaatgata tcggctgcgg tatggcgcta tggcaaacag atattctcac tcgcaaatac
     6181 aacgccgata agtttgaaaa gcgattatca gatctggatg acgttgctga agaaagctgg
     6241 ctggaggaaa acctgccgtc agcatttgca cagcatccgt ggcgcagctc gcttggctct
     6301 atcggtggcg gcaatcattt cgctgaactg caacaagttg atcaaatcat caacgctgaa
     6361 ctgtttgcac tggcaggtct ggatgcacaa catctgcaac tgttggttca tagcggctcg
     6421 cggggggtgg ggcagtctat tttacagcgg catattgcct cgttctcgca tcatggtttg
     6481 cctcaaggta gtgacgacgc gctacggtat attgcggaac atgacgatgc gctggcgttt
     6541 gcgtgtatta atcgccagat gatcgctttg cgcataatgc aacaagttaa ggccacggga
     6601 agtccggttc tggatgtggc gcataacttt gttagcgcgt gtcaaatcgg cgatcaacag
     6661 ggctggttgc atcgtaaagg tgccacgccg gatgacaacg gtctggtgat tattcccggt
     6721 tcacgtggtg attactcctg gattgtacag cctgttgcga acgaaaaaac gctccactcg
     6781 ctggcgcatg gggcagggcg taaatggggg cgcaccgagt gtaaagggcg tctggcagcg
     6841 aaatacacgg cgacgcaact ctcgcgtact gaacttggca gtcgggtaat ttgtcgcgat
     6901 aaacaactca tctttgaaga agcgccacaa gcctataaat cggctgaaag cgtggtgcaa
     6961 tgtctggtgc aggccggttt aattattcct gtcgcgcggc tgcgtccggt gctaacgctc
     7021 aaaaacagtg gagggaaaaa aggatgatct tgctacaact ctcctcagcg caggggccgg
     7081 aagaatgttg tctcgcagtg aaaaaggcgc tggacaggct aattaaagaa gctgcccgac
     7141 aagacgtcgc ggtaacggtg ctggaaacag aaacgggcca ctactctgac acgctgcgtt
     7201 cggcgctgat ttctctggat ggcgataacg catgggcatt aagcgaaagc tggtgtggca
     7261 ctattcagtg gatttgtccg agtccgtatc ggcctcatca tgggcgcaaa aactggtttc
     7321 tgggcattgg gcgttttacc gctgatgagc aggaacaatc ggatgcaatc cgttatgaga
     7381 cgttgcgttc gtcggggccg ggcggtcaac atgtcaataa aaccgactcg gcggtacgcg
     7441 ccacgcattt ggcatccggt attagcgtga aggttcagtc agagcgtagt cagcatgcta
     7501 acaagcggct ggcacgattg ctgattgcct ggaagctgga gcagcagcaa caggaaaata
     7561 gcgcggtgct gaaatcgcag cggcgaatgt tccatcacca gattgaacgt ggcaacccga
     7621 gacggacatt tacagggatg gcttttatcg aaggataatg aaggatgaaa ctgccggaag
     7681 gcgattaaac gccatccggc agcaaatcaa ataattactt cgccggaatt tctttcagca
     7741 gttcagtcag cagtgtccag taatgaccta cgctttcgat gtgaacttgc tcatccggag
     7801 agtgtggacc ggtgatagtt ggcccgatag aaaccatgtc catttccgga tacggttttt
     7861 tgaacagacc acattccagg cccgcgtgga taatctggat gttcggcgtt ttgttgaaca
     7921 gacgctgata ggtttcacgt accagatgca tcaccggaga attagcgtcc ggctgccagc
     7981 caggatatgc gcctttcgct tcggttttcg cgccagccag tttacccagc gaatccagca
     8041 tgctcaccac gtagtcttta ccgctgtcga tcagtgaacg gatcagacag tggatttcta
     8101 cgttattatc agtcatggtc accacaccga cgttcaggga ggtttcgacc acaccttttg
     8161 ccacgtctga gttgcggatc acaccgttcg gggtggcgtt cagcagacga ataaaggtat
     8221 cgcgagattt cgcaatcagg gcagctttat cgttcgctac agagtccagc aacaaggcca
     8281 gatttttctc tttctctgcc agctcgtttt tcaggatctc ctgataggta ttcaccagag
     8341 atttcaggac gtcgacttta tcagctgcga cagcaatggt cgcaaaggct tcacgcggga
     8401 tggcgttacg cagtgtgccg ccgttgaaat cgataaggcg cagatccagt tcttctgcat
     8461 gacccgccag gaagcgcacc agcagtttgt tggcattacc caggccaacg tggatttccc
     8521 cgccggagtg accccctttc agacctttta aggttaactt gaaggtttca aaaccagctg
     8581 gaaccgcttc acgatctaaa tgcaggttgg aggtgaagtc gatacccccc gcacaaccca
     8641 tgtagatttc accttcttct tcggagtcgg tgttaatcag aatatcagcc tgcaaccagt
     8701 tgctctgtaa gccgaacgca ccgtccatac cggcttcttc ggtcatggtc agcagcactt
     8761 ccagcgggcc gtgaaccacg ttttcgtcag ccagaactgc cagtgcagag gccataccaa
     8821 tgccgttatc cgcacccagc gtggtgccgc gcgctttaac ccattcgcca tcaatataag
     8881 gctggatagg atctttcgtg aagtcatgca cggtgtcgtt atttttctgc ggcaccatat
     8941 cgaggtgggc ctgtaagacg accggtttac gattttccat acctgcggta gcaggtttac
     9001 gaatcaggat attacctacc tgatcgcgtt cgacatggaa acctttctct tttgcccaac
     9061 caacaatgta ttcagcgagt tgctcttcat gataggacgg gtgaggaata gaacagattt
     9121 tggcaaaaat atcccacagc ggctgtggag ataattgaga cagttcagac acgttaagtc
     9181 tccttgtcga tcacccgcaa aacagtattg caggtcacag ggttagcaga aaatgttgtc
     9241 aacacaagac aggcttgcga gatatgtttg agaataccac tttatcccgc gtcagggaga
     9301 ggcagtgcgt aaaaagacgc ggactcatgt gaaatactgg tttttagtgc gccagatctc
     9361 tataatctcg cgcaacctat tttcccctcg aacacttttt aagccgtaga taaacaggct
     9421 gggacacttc acatgagcga aaaatacatc gtcacctggg acatgttgca gatccatgca
     9481 cgtaaactcg caagccgact gatgccttct gaacaatgga aaggcattat tgccgtaagc
     9541 cgtggcggtc tggtaccggg tgcgttactg gcgcgtgaac tgggtattcg tcatgtcgat
     9601 accgtttgta tttccagcta cgatcacgac aaccagcgcg agcttaaagt gctgaaacgc
     9661 gcagaaggcg atggcgaagg cttcatcgtt attgatgacc tggtggatac cggtggtact
     9721 gcggttgcga ttcgtgaaat gtatccaaaa gcgcactttg tcaccatctt tgcaaaaccg
     9781 gctggtcgtc cgctggttga tgattatgtt gttgatatcc cgcaagatac ctggatcgaa
     9841 cagccgtggg atatgggcgt cgtattcgtc ccgccaatct ccggtcgcta atcttttcaa
     9901 cgcctggcac tgccgggcgt tgttcttttt aacttcaggc gggttacaat agtttccagt
     9961 aagtattctg gaggctgcat ccatgacaca ggcaaacctg agcgaaaccc tgttcaaacc
    10021 ccgctttaaa catcctgaaa cctcgacgct agtccgccgc tttaatcacg gcgcacaacc
    10081 gcctgtgcag tcggctcttg atggtaaaac catccctcac tggtatcgca tgattaaccg
    10141 tctgatgtgg atctggcgcg gtattgaccc acgtgaaatc ctcgacgtcc aggcacgtat
    10201 tgtgatgagc gatgctgaac gtaccgacga tgatttatac gatactgtga ttggctaccg
    10261 tggtggcaac tggatttatg agtgggccac ccaggcgatg gtgtggcaac aaaaagcctg
    10321 tgcggaagaa gatccgcaac tcagtggtcg acactggctg catgcggcta cgttgtacaa
    10381 cattgccgcc tatcctcatc tgaaaggaga tgacctggcc gagcaagcgc aggctttatc
    10441 aaaccgcgcc tatgaagagg ccgcccagcg tctgccgggc acgatgcggc agatggagtt
    10501 taccgtaccc ggcggtgcgc ccatcaccgg ctttttgcat atgccgaaag gcgatggccc
    10561 gttcccgaca gtattaatgt gtggtggtct ggatgcgatg cagacggact attacagcct
    10621 gtatgaacgt tattttgcgc cgcgcggcat tgcgatgctg actattgata tgccgtcggt
    10681 gggcttttct tcaaaatgga agctcaccca ggactccagc ctgttgcatc agcacgtctt
    10741 aaaggcgctg cctaacgtac cgtgggtgga tcacactcgc gtcgcggcct ttggtttccg
    10801 tttcggcgct aacgttgccg tgcgtctggc atatcttgaa tcgccgcgtc tgaaagcggt
    10861 tgcctgtctt ggtccggtag ttcataccct gttgagtgat tttaagtgcc agcaacaggt
    10921 gccggaaatg tatcttgacg ttctggcgag tcgtttgggg atgcatgatg cttccgacga
    10981 agcgttacgc gtggagctga atcgctattc attaaaagtg caaggattgc tgggacgtcg
    11041 ctgcccaacg ccaatgttat caggctactg gaagaacgat ccgttcagcc cggaagagga
    11101 ctcacgctta atcacctcat catctgctga cggtaaatta ttagagatcc catttaaccc
    11161 ggtgtatcgg aattttgaca aaggtcttca ggaaatcacc ggctggatcg aaaaacgctt
    11221 gtgttaaaaa tttgctaaat tttgccaatt tggtaaaaca gttgcatcac aacaggagat
    11281 agcaatgacg ttaccgagtg gacacccgaa gagcagattg atcaaaaaat ttaccgcact
    11341 aggcccgtat attcgtgaag gtaagtgcga agataatcga ttctttttcg attgtctggc
    11401 tgtatgcgtc aacgtgaaac cggcaccgga agtgcgtgaa ttctggggct ggtggatgga
    11461 gctggaagcg caggaatccc gttttaccta cagctaccag tttggtctgt tcgataaagc
    11521 aggcgactgg aagagtgttc cggtaaaaga cactgaagtg gttgaacgac tggagcacac
    11581 cctgcgtgag tttcacgaga agctgcgtga actgctgacg acgctgaatc tgaagctgga
    11641 accggcggat gattttcgtg acgagccggt gaagttaacg gcgtgagtga aatgtgccgg
    11701 atgcatcaca tccggcaata atcattaaaa ctgataggtc atgccaaccg cgacaatatc
    11761 atcattatta atattcaatt tgttatcgct atccagttgg ttgattttat aatcaacaaa
    11821 cgctgacata tttttgttga aataatatgt agccccgaca tcgatataat tgaccagatc
    11881 ttcatcaccg ataccttcaa tatctttccc tttcgataag acataaccca gcgatggacg
    11941 cagaccaaag tcaaactggt attgagcgac cgcttcaaag ttctgtgtct tattggcaaa
    12001 gccgccagtt attggcgtca ttttgcgtgt ttcagaataa aaagttgcca gataaatatt
    12061 attggcatcg tatttcagac ctgtagccca tgcttctgca cgcttgcctg tgccacggct
    12121 ttgcaggttc tgctcgttgg tgcgatctga gttggtatag gccccactaa tggcgaaatc
    12181 gctgccgcca aagtcatatg tcaatgacgt gccgaagcca tcgccgtttt gctttttaac
    12241 gtcgcggttt tcgtttttcc cttgatattg cagggttaag ttcaggccat cgataacgcc
    12301 gaagaagtcg gtgttccgat acgtcgccag accgctggcg cgtttggtca taaagttgtc
    12361 ggtctgcgcc gaggagtcgc caccaaattc cgggaacata tcggtccagg cttccacgtc
    12421 atacaacgcg cccaggttac ggccatagtc gaaagaaccc aaatctttat acttcaatcc
    12481 ggcaaaagcg agacgcgttt tttgctgtgc agtatcactc tccgctttat ttccggcaaa
    12541 ctccgcttcc caacggccat agccagtcag ttgatcgtta atttgtgttt cgcctttaaa
    12601 accaaaacgg atataactct ggtcgccatc tttactgtcg ttatcactca tataatgcat
    12661 ggcttta
//
LOCUS       DAPGWB010000470         4057 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.guided.257, whole genome shotgun sequence.
ACCESSION   DAPGWB010000470 DAPGWB010000000
VERSION     DAPGWB010000470.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4057
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.guided.257"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            <1..1345
                     /locus_tag="RHX79_004955"
     CDS             <1..1345
                     /locus_tag="RHX79_004955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS91-like element ISVsa3 family transposase"
                     /protein_id="HDV2199991.1"
                     /translation="PGYVQREFEEFLQCGRLEHGFLRVRCESCHAEHLVAFSCKRRGF
                     CPSCGARRMAESAALLVDEVLPEQPMRQWVLSFPFQLRFLFASRPEIMGWVLGIVYRV
                     IATHLVKKAGHTHQVAKTGAVTLIQRFGSALNLNVHFHMLFLDGVYVEQSHGSARFRW
                     VKAPTSPELTQLTHTIAHRVGRYLERQGLLERDVENSYLASDAVDDDPMTPLLGHSIT
                     YRIAVGSQAGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGVAARADERKKLERLCRY
                     ISRPAVSEKRLSLTRGGNVRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTR
                     FHGVFAPNSRHRALVTPAKRGRGNKVRVADEPATPAQRRASMTWAQRLKRVFNIDIET
                     CSGCGGAMKVIACIEDPIVIKQILDHLKHKAETSGTRALPESRAPPAELLLGLFD"
     gene            1814..2260
                     /locus_tag="RHX79_004956"
                     /pseudo
     CDS             1814..2260
                     /locus_tag="RHX79_004956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747810.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3363 domain-containing protein"
     gene            2477..3691
                     /gene="floR"
                     /locus_tag="RHX79_004957"
     CDS             2477..3691
                     /gene="floR"
                     /locus_tag="RHX79_004957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol/florfenicol efflux MFS
                     transporter FloR"
                     /protein_id="HDV2199992.1"
                     /translation="MTTTRPAWAYTLPAALLLMAPFDILASLAMDIYLPVVPAMPGIL
                     NTTPAMIQLTLSLYMVMLGVGQVIFGPLSDRIGRRPILLAGATAFVIASLGAAWSSTA
                     PAFVAFRLLQAVGASAMLVATFATVRDVYANRPEGVVIYGLFSSMLAFVPALGPIAGA
                     LIGEFLGWQAIFITLAILAMLALLNAGFRWHETRPLDQVKTRRSVLSIFASPAFWVYT
                     VGFSAGMGTYFVFFSTAPRVLIGQAEYSEIGFSFAFATVALVMIVTTRFAKSFVARWG
                     IAGCVARGMALLVCGAVLLGIGELYGSPSFLTFILPMWVVAVGIVFTVSVTANGALAE
                     FDDIAGSAVAFYFCVQSLIVSIVGTLAVALLNGDTAWPVICYATAMAVLVSLGLVLLR
                     LRGAATEKSPVV"
     gene            3719..4024
                     /locus_tag="RHX79_004958"
     CDS             3719..4024
                     /locus_tag="RHX79_004958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV2199993.1"
                     /translation="MRRTNHRNLVNVGILSGRIPLISLVQFIAVAEHLNFRHAAKALG
                     ISQSSVSARVKALEDNLGVLLFERHARGVRLTDAGRHFMERVTAGVDQLDHAVKTAE"
BASE COUNT          754 a         1177 c         1263 g          863 t
ORIGIN      
        1 gccgggctat gtgcaacggg aatttgaaga atttctccaa tgcgggcggc tggagcatgg
       61 ctttctacgg gttcgctgcg agtcttgcca cgccgagcac ctggtcgctt tcagctgtaa
      121 gcgtcgcggt ttctgcccga gctgtggggc gcggcggatg gccgaaagtg ccgccttgct
      181 ggttgatgaa gtactgcctg aacaacccat gcgtcagtgg gtgttgagct tcccgtttca
      241 gctgcgtttc ctgtttgcca gccggcccga gatcatgggg tgggtgctgg gcatcgttta
      301 ccgcgtcatt gccacgcacc tggtcaagaa agcgggccat acccaccaag tggccaagac
      361 gggcgcggtc accctgatcc agcgttttgg atcggcgctc aatctgaatg ttcacttcca
      421 catgctgttt ctcgacggtg tgtatgtcga gcaatcccac ggctcagcgc gtttccgctg
      481 ggtcaaggcg ccgaccagcc cagagctcac ccagctgacg cacaccatcg cccaccgggt
      541 gggtcgctat ctggaacggc aaggcctgct ggaacgggat gtcgaaaaca gctatctggc
      601 ctcggatgcg gtggatgacg acccgatgac acccctgctg gggcactcga tcacttaccg
      661 tatcgctgtc ggttcacagg cggggcgaaa ggtgttcact ttgcaaactc tgccgaccag
      721 tggtgatccg ttcggtgacg ggattggcaa ggtagccggg tccagcctgc acgccggcgt
      781 ggcggccagg gccgatgaac gcaagaagct cgaacggctg tgccggtaca tcagccgccc
      841 ggcggtatcc gagaagcggc tgtcgttaac acgaggcggc aacgtgcgct accagctcaa
      901 gacgccgtac cgggacggca ccacgcacgt cattttcgaa ccattggatt tcattgcaag
      961 gctggccgcc ctggtaccga agcccagagt caacctaacc cgcttccacg gggtgttcgc
     1021 acccaacagt cggcaccggg cgttggtcac gccggcaaaa cggggcaggg gcaacaaggt
     1081 cagggtggct gatgaaccgg caacaccagc acaacggcga gcgtcgatga catgggcgca
     1141 acggctcaag cgtgttttca atatcgacat cgagacctgc agcggctgcg gcggcgccat
     1201 gaaagtcatc gcctgcattg aagaccctat agtgatcaag cagatccttg atcacctgaa
     1261 gcacaaagcc gaaaccagcg ggaccagggc gttacccgaa agccgggcgc caccggctga
     1321 gctgctcctg ggtctgtttg actgacgagc ctgaaggcca acgataccaa tcaaaatgct
     1381 gcgttcacag cgccgcggca gggatccgcc gtgctggttg tcggaaaagg agccgctagt
     1441 gggaaagagg agggtaaatt ttcagcgttg ctggctcccc gtcagccgga ttgggttgca
     1501 tcgcaggggt gtcgaaagag tcaactgcgg tccaaagctg ttggacttgg gtgaaaaggg
     1561 cgtttattct tcctatacgt gccgcgttcc aggcggcgac tatgagggct atgtcgatgc
     1621 ccatgtgcgc cggctggagg cgctacgccg ggccggtatc gtcgagcgga tcgacgccga
     1681 ccaatggcgc atccccgatg atctggtcag ccgtgccgcc gcccatgacg ccggccgaga
     1741 cagtcaggcc agcgttcgcg tcctttcccc ggtcgatctg aacaaacaga tcggatcgga
     1801 cggcgcgacc tggctggacc ggcggctgat ccacggcgag acggccgacc ttgcgccaac
     1861 cggcttcggg caacaagtcc gcgaagccat ggaccagcgc cgcgagcacc atatcgaaca
     1921 gggcgacgcc acccgcagcc gggacagccg cgtcttctac cggcgcaacc ttctcgccat
     1981 cctgcgggag cgcgaggtag tcggcgtcgg atcggatatg gctttgagta agggcctgcc
     2041 gttccgcgcc gccacggacg gcgagagcgt cagcggcaag tttaccggaa ccgtgcatct
     2101 atcgagcggc aagttcgccg tggtcgagaa atcccatgag ttcacccttg tcccgtggcg
     2161 gccgatcatc gaccgccaac tcggccgcga ggttatgggc atcgtgcagg gcgggtcggt
     2221 gtcgtggcag ttagggcggc agagggggct ggaacgctga gtgcgcccat gccgcattgc
     2281 gaagcaaaag ataatcggat aaaatgtagc aattcatatt cgtaagcgtg gagtaatcag
     2341 atgggaaatt ccaagtcagc agacaagtaa gccgcaacaa ccagtattgt tgttgcggcg
     2401 ctctgtaagg ctagtctcat ctgattgctg acgagcagac gtcgcccggt attccttaat
     2461 cgagggttga ttcgtcatga ccaccacacg ccccgcgtgg gcctatacgc tgccggcagc
     2521 actgctgctg atggctcctt tcgacatcct cgcttcactg gcgatggata tttatctccc
     2581 tgtcgttcca gcgatgcccg gcatcctgaa cacgacgccc gctatgatcc aactcacgtt
     2641 gagcctctat atggtgatgc tcggcgtggg ccaggtgatt tttggtccgc tctcagacag
     2701 aatcgggcga cggccaattc tacttgcggg cgcaacggct ttcgtcattg cgtctctggg
     2761 agcagcttgg tcttcaactg caccggcctt tgtcgctttc cgtctacttc aagcagtggg
     2821 cgcgtcggcc atgctggtgg cgacgttcgc gacggttcgc gacgtttatg ccaaccgtcc
     2881 tgagggtgtc gtcatctacg gccttttcag ttcgatgctg gcgttcgtgc ctgcgctcgg
     2941 ccctatcgcc ggagcattga tcggcgagtt cttgggatgg caggcgatat tcattacttt
     3001 ggctatactg gcgatgctcg cactcctaaa tgcgggtttc aggtggcacg aaacccgccc
     3061 tctggatcaa gtcaagacgc gccgatctgt cttgtcgatc ttcgcgagtc cggctttttg
     3121 ggtttacact gtcggcttta gcgccggtat gggcacctac ttcgtcttct tctcgacggc
     3181 tccccgtgtg ctcataggcc aagcggaata ttccgagatc ggattcagct ttgccttcgc
     3241 cactgtcgcg cttgtaatga tcgtgacaac ccgtttcgcg aagtcctttg tcgccagatg
     3301 gggcatcgca ggatgcgtgg cgcgtgggat ggcgttgctt gtttgcggag cggtcctgtt
     3361 ggggatcggc gaactttacg gctcgccgtc attcctcacc ttcatcctac cgatgtgggt
     3421 tgtcgcggtc ggtattgtct tcacggtgtc cgttaccgcg aacggcgctt tggcagagtt
     3481 cgacgacatc gcgggatcag cggtcgcgtt ctacttctgc gttcaaagcc tgatagtcag
     3541 cattgtcggg acattggcgg tggcactttt aaacggtgac acagcgtggc ccgtgatctg
     3601 ttacgccacg gcgatggcgg tactggtttc gttggggctg gtgctccttc ggctccgtgg
     3661 ggctgccacc gagaagtcgc cagtcgtcta accgacgact ggtagcaggc ccgctccgat
     3721 gcggcgcact aaccatcgaa acctcgtgaa tgtcggtatc ctgtctggca ggataccgct
     3781 catttccctt gttcagttca tcgccgtcgc cgagcatctg aattttcggc atgcggccaa
     3841 ggcacttggt atcagccagt cgagcgtcag cgcgcgtgtg aaagcgctgg aggataacct
     3901 tggtgtcctg ctatttgagc gccatgcgcg gggcgttcgg ctaacagacg caggcaggca
     3961 cttcatggag cgtgtcacgg cgggtgtcga tcaactcgat cacgcagtga agaccgcgga
     4021 gtgacgggca ctggctggca atgtctagca acggcag
//
LOCUS       DAPGWB010000471         3069 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.guided.282, whole genome shotgun sequence.
ACCESSION   DAPGWB010000471 DAPGWB010000000
VERSION     DAPGWB010000471.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.guided.282"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            185..1000
                     /gene="sul2"
                     /locus_tag="RHX79_004959"
     CDS             185..1000
                     /gene="sul2"
                     /locus_tag="RHX79_004959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HDV2199994.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            1061..1864
                     /locus_tag="RHX79_004960"
                     /note="aph(3'')-Ib"
     CDS             1061..1864
                     /locus_tag="RHX79_004960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HDV2199995.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            1864..2700
                     /locus_tag="RHX79_004961"
     CDS             1864..2700
                     /locus_tag="RHX79_004961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HDV2199996.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            3006..>3069
                     /locus_tag="RHX79_004962"
     CDS             3006..>3069
                     /locus_tag="RHX79_004962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000844627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase"
                     /protein_id="HDV2199997.1"
                     /translation="MKTAALDLARERQAHEAGART"
BASE COUNT          610 a          879 c          886 g          694 t
ORIGIN      
        1 attgcctact gagcgctgcc gcacagctcc ataggccgct ttcctggctt tgcttccaga
       61 tgtatgctat tctgctcctg cagctaatgg atcaccgcaa acaggttact cgcctgggga
      121 ttccctttcg acccgagcat ccgtatgaga ctcatgctcg attattatta ttatagaagc
      181 ccccatgaat aaatcgctca tcattttcgg catcgtcaac ataacctcgg acagtttctc
      241 cgatggaggc cggtatctgg cgccagacgc agccattgcg caggcgcgta agctgatggc
      301 cgagggggca gatgtgatcg acctcggtcc ggcatccagc aatcccgacg ccgcgcctgt
      361 ttcgtccgac acagaaatcg cgcgtatcgc gccggtgctg gacgcgctca aggcagatgg
      421 cattcccgtc tcgctcgaca gttatcaacc cgcgacgcaa gcctatgcct tgtcgcgtgg
      481 tgtggcctat ctcaatgata ttcgcggttt tccagacgct gcgttctatc cgcaattggc
      541 gaaatcatct gccaaactcg tcgttatgca ttcggtgcaa gacgggcagg cagatcggcg
      601 cgaggcaccc gctggcgaca tcatggatca cattgcggcg ttctttgacg cgcgcatcgc
      661 ggcgctgacg ggtgccggta tcaaacgcaa ccgccttgtc cttgatcccg gcatggggtt
      721 ttttctgggg gctgctcccg aaacctcgct ctcggtgctg gcgcggttcg atgaattgcg
      781 gctgcgcttc gatttgccgg tgcttctgtc tgtttcgcgc aaatcctttc tgcgcgcgct
      841 cacaggccgt ggtccggggg atgtcggggc cgcgacactc gctgcagagc ttgccgccgc
      901 cgcaggtgga gctgacttca tccgcacaca cgagccgcgc cccttgcgcg acgggctggc
      961 ggtattggcg gcgctgaaag aaaccgcaag aattcgttaa ctgcacattc gggatatttc
     1021 tctatattcg cgcttcatca gaaaactgaa ggaacctcca ttgaatcgaa ctaatatttt
     1081 ttttggtgaa tcgcattctg actggttgcc tgtcagaggc ggagaatctg gtgattttgt
     1141 ttttcgacgt ggtgacgggc atgccttcgc gaaaatcgca cctgcttccc gccgcggtga
     1201 gctcgctgga gagcgtgacc gcctcatttg gctcaaaggt cgaggtgtgg cttgccccga
     1261 ggtcatcaac tggcaggagg aacaggaggg tgcatgcttg gtgataacgg caattccggg
     1321 agtaccggcg gctgatctgt ctggagcgga tttgctcaaa gcgtggccgt caatggggca
     1381 gcaacttggc gctgttcaca gcctatcggt tgatcaatgt ccgtttgagc gcaggctgtc
     1441 gcgaatgttc ggacgcgccg ttgatgtggt gtcccgcaat gccgtcaatc ccgacttctt
     1501 accggacgag gacaagagta cgccgcagct cgatcttttg gctcgtgtcg aacgagagct
     1561 accggtgcgg ctcgaccaag agcgcaccga tatggttgtt tgccatggtg atccctgcat
     1621 gccgaacttc atggtggacc ctaaaactct tcaatgcacg ggtctgatcg accttgggcg
     1681 gctcggaaca gcagatcgct atgccgattt ggcactcatg attgctaacg ccgaagagaa
     1741 ctgggcagcg ccagatgaag cagagcgcgc cttcgctgtc ctattcaatg tattggggat
     1801 cgaagccccc gaccgcgaac gccttgcctt ctatctgcga ttggaccctc tgacttgggg
     1861 ttgatgttca tgccgcctgt ttttcctgct cattggcacg tttcgcaacc tgttctcatt
     1921 gcggacacct tttccagcct cgtttggaaa gtttcattgc cagacgggac tcctgcaatc
     1981 gtcaagggat tgaaacctat agaagacatt gctgatgaac tgcgcggggc cgactatctg
     2041 gtatggcgca atgggagggg agcagtccgg ttgctcggtc gtgagaacaa tctgatgttg
     2101 ctcgaatatg ccggggagcg aatgctctct cacatcgttg ccgagcacgg cgactaccag
     2161 gcgaccgaaa ttgcagcgga actaatggcg aagctgtatg ccgcatctga ggaacccctg
     2221 ccttctgccc ttctcccgat ccgggatcgc tttgcagctt tgtttcagcg ggcgcgcgat
     2281 gatcaaaacg caggttgtca aactgactac gtccacgcgg cgattatagc cgatcaaatg
     2341 atgagcaatg cctcggaact gcgtgggcta catggcgatc tgcatcatga aaacatcatg
     2401 ttctccagtc gcggctggct ggtgatagat cccgtcggtc tggtcggtga agtgggcttt
     2461 ggcgccgcca atatgttcta cgatccggct gacagagacg acctttgtct cgatcctaga
     2521 cgcattgcac agatggcgga cgcattctct cgtgcgctgg acgtcgatcc gcgtcgcctg
     2581 ctcgaccagg cgtacgctta tgggtgcctt tccgcagctt ggaacgcgga tggagaagag
     2641 gagcaacgcg atctagctat cgcggccgcg atcaagcagg tgcgacagac gtcatactag
     2701 atatcaagcg acttctccta tcccctggga acacatcaat ctcaccggag aatatcgctg
     2761 gccaaagcct tagcgtagga ttccgcccct tcccgcaaac gacccctgga agccccgtag
     2821 cgacgcggag aggggcgaga caagccaagg gcgcaggctc gatgcgcagc acgacatagc
     2881 cggttctcgc aaggacgaga atttccctgc ggtgcccctc aagtgtcaat gaaagtttcc
     2941 aacgcgagcc attcgcgaga gccttgagtc cacgctagat ctatctcatc tgcgcaaggc
     3001 agaacgtgaa gacggccgcc ctggacctcg cccgcgagcg ccaggcgcac gaggccggcg
     3061 cgcggaccc
//
LOCUS       DAPGWB010000472         3069 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.guided.283, whole genome shotgun sequence.
ACCESSION   DAPGWB010000472 DAPGWB010000000
VERSION     DAPGWB010000472.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.guided.283"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            185..1000
                     /gene="sul2"
                     /locus_tag="RHX79_004963"
     CDS             185..1000
                     /gene="sul2"
                     /locus_tag="RHX79_004963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HDV2199998.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            1061..1864
                     /locus_tag="RHX79_004964"
                     /note="aph(3'')-Ib"
     CDS             1061..1864
                     /locus_tag="RHX79_004964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HDV2199999.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            1864..2700
                     /locus_tag="RHX79_004965"
     CDS             1864..2700
                     /locus_tag="RHX79_004965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APH(6)-I family aminoglycoside
                     O-phosphotransferase"
                     /protein_id="HDV2200000.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGAYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            3006..>3069
                     /locus_tag="RHX79_004966"
     CDS             3006..>3069
                     /locus_tag="RHX79_004966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000844627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase"
                     /protein_id="HDV2200001.1"
                     /translation="MKTAALDLARERQAHEAGART"
BASE COUNT          609 a          880 c          886 g          694 t
ORIGIN      
        1 attgcctact gagcgctgcc gcacagctcc ataggccgct ttcctggctt tgcttccaga
       61 tgtatgctat tctgctcctg cagctaatgg atcaccgcaa acaggttact cgcctgggga
      121 ttccctttcg acccgagcat ccgtatgaga ctcatgctcg attattatta ttatagaagc
      181 ccccatgaat aaatcgctca tcattttcgg catcgtcaac ataacctcgg acagtttctc
      241 cgatggaggc cggtatctgg cgccagacgc agccattgcg caggcgcgta agctgatggc
      301 cgagggggca gatgtgatcg acctcggtcc ggcatccagc aatcccgacg ccgcgcctgt
      361 ttcgtccgac acagaaatcg cgcgtatcgc gccggtgctg gacgcgctca aggcagatgg
      421 cattcccgtc tcgctcgaca gttatcaacc cgcgacgcaa gcctatgcct tgtcgcgtgg
      481 tgtggcctat ctcaatgata ttcgcggttt tccagacgct gcgttctatc cgcaattggc
      541 gaaatcatct gccaaactcg tcgttatgca ttcggtgcaa gacgggcagg cagatcggcg
      601 cgaggcaccc gctggcgaca tcatggatca cattgcggcg ttctttgacg cgcgcatcgc
      661 ggcgctgacg ggtgccggta tcaaacgcaa ccgccttgtc cttgatcccg gcatggggtt
      721 ttttctgggg gctgctcccg aaacctcgct ctcggtgctg gcgcggttcg atgaattgcg
      781 gctgcgcttc gatttgccgg tgcttctgtc tgtttcgcgc aaatcctttc tgcgcgcgct
      841 cacaggccgt ggtccggggg atgtcggggc cgcgacactc gctgcagagc ttgccgccgc
      901 cgcaggtgga gctgacttca tccgcacaca cgagccgcgc cccttgcgcg acgggctggc
      961 ggtattggcg gcgctgaaag aaaccgcaag aattcgttaa ctgcacattc gggatatttc
     1021 tctatattcg cgcttcatca gaaaactgaa ggaacctcca ttgaatcgaa ctaatatttt
     1081 ttttggtgaa tcgcattctg actggttgcc tgtcagaggc ggagaatctg gtgattttgt
     1141 ttttcgacgt ggtgacgggc atgccttcgc gaaaatcgca cctgcttccc gccgcggtga
     1201 gctcgctgga gagcgtgacc gcctcatttg gctcaaaggt cgaggtgtgg cttgccccga
     1261 ggtcatcaac tggcaggagg aacaggaggg tgcatgcttg gtgataacgg caattccggg
     1321 agtaccggcg gctgatctgt ctggagcgga tttgctcaaa gcgtggccgt caatggggca
     1381 gcaacttggc gctgttcaca gcctatcggt tgatcaatgt ccgtttgagc gcaggctgtc
     1441 gcgaatgttc ggacgcgccg ttgatgtggt gtcccgcaat gccgtcaatc ccgacttctt
     1501 accggacgag gacaagagta cgccgcagct cgatcttttg gctcgtgtcg aacgagagct
     1561 accggtgcgg ctcgaccaag agcgcaccga tatggttgtt tgccatggtg atccctgcat
     1621 gccgaacttc atggtggacc ctaaaactct tcaatgcacg ggtctgatcg accttgggcg
     1681 gctcggaaca gcagatcgct atgccgattt ggcactcatg attgctaacg ccgaagagaa
     1741 ctgggcagcg ccagatgaag cagagcgcgc cttcgctgtc ctattcaatg tattggggat
     1801 cgaagccccc gaccgcgaac gccttgcctt ctatctgcga ttggaccctc tgacttgggg
     1861 ttgatgttca tgccgcctgt ttttcctgct cattggcacg tttcgcaacc tgttctcatt
     1921 gcggacacct tttccagcct cgtttggaaa gtttcattgc cagacgggac tcctgcaatc
     1981 gtcaagggat tgaaacctat agaagacatt gctgatgaac tgcgcggggc cgactatctg
     2041 gtatggcgca atgggagggg agcagtccgg ttgctcggtc gtgagaacaa tctgatgttg
     2101 ctcgaatatg ccggggagcg aatgctctct cacatcgttg ccgagcacgg cgcctaccag
     2161 gcgaccgaaa ttgcagcgga actaatggcg aagctgtatg ccgcatctga ggaacccctg
     2221 ccttctgccc ttctcccgat ccgggatcgc tttgcagctt tgtttcagcg ggcgcgcgat
     2281 gatcaaaacg caggttgtca aactgactac gtccacgcgg cgattatagc cgatcaaatg
     2341 atgagcaatg cctcggaact gcgtgggcta catggcgatc tgcatcatga aaacatcatg
     2401 ttctccagtc gcggctggct ggtgatagat cccgtcggtc tggtcggtga agtgggcttt
     2461 ggcgccgcca atatgttcta cgatccggct gacagagacg acctttgtct cgatcctaga
     2521 cgcattgcac agatggcgga cgcattctct cgtgcgctgg acgtcgatcc gcgtcgcctg
     2581 ctcgaccagg cgtacgctta tgggtgcctt tccgcagctt ggaacgcgga tggagaagag
     2641 gagcaacgcg atctagctat cgcggccgcg atcaagcagg tgcgacagac gtcatactag
     2701 atatcaagcg acttctccta tcccctggga acacatcaat ctcaccggag aatatcgctg
     2761 gccaaagcct tagcgtagga ttccgcccct tcccgcaaac gacccctgga agccccgtag
     2821 cgacgcggag aggggcgaga caagccaagg gcgcaggctc gatgcgcagc acgacatagc
     2881 cggttctcgc aaggacgaga atttccctgc ggtgcccctc aagtgtcaat gaaagtttcc
     2941 aacgcgagcc attcgcgaga gccttgagtc cacgctagat ctatctcatc tgcgcaaggc
     3001 agaacgtgaa gacggccgcc ctggacctcg cccgcgagcg ccaggcgcac gaggccggcg
     3061 cgcggaccc
//
LOCUS       DAPGWB010000473         1648 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.guided.332, whole genome shotgun sequence.
ACCESSION   DAPGWB010000473 DAPGWB010000000
VERSION     DAPGWB010000473.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.guided.332"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            247..1122
                     /locus_tag="RHX79_004967"
     CDS             247..1122
                     /locus_tag="RHX79_004967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A extended-spectrum beta-lactamase
                     CTX-M-14"
                     /protein_id="HDV2200002.1"
                     /translation="MVTKRVQRMMFAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSS
                     GGRLGVALIDTADNTQVLYRGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKP
                     ADLVNYNPIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGD
                     ETFRLDRTEPTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNT
                     TGAASIRAGLPTSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESR
                     RDVLASAARIIAEGL"
     gene            1157..>1648
                     /locus_tag="RHX79_004968"
     CDS             1157..>1648
                     /locus_tag="RHX79_004968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HDV2200003.1"
                     /translation="MKDQITYLPDNADRSVAKQKFKITNWPTYNKALINRGSITFWLD
                     DEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFSLMNVP
                     LRCPDYSCVSRRAKSVNISFKTPTRGEIAHLVIDSTGLKVFGEGEWKVKITLRKLPLA
                     VAVA"
BASE COUNT          407 a          410 c          467 g          364 t
ORIGIN      
        1 gaatatcatc aataaaattg agtgttgctc tgtggataac ttgcagagtt tattaagtat
       61 cattgcagca aagatgaaat caatgattta tcaaaaatga ttgaaaggtg gttgtaaata
      121 atgttacaat gtgtgagaag cagtctaaat tcttcgtgaa atagtgattt ttgaagctaa
      181 taaaaaacac acgtggaatt tagggaatac tgatgtaaca cggattgacc gtattgggag
      241 tttgagatgg tgacaaagag agtgcaacgg atgatgttcg cggcggcggc gtgcattccg
      301 ctgctgctgg gcagcgcgcc gctttatgcg cagacgagtg cggtgcagca aaagctggcg
      361 gcgctggaga aaagcagcgg agggcggctg ggcgtcgcgc tcatcgatac cgcagataat
      421 acgcaggtgc tttatcgcgg tgatgaacgc tttccaatgt gcagtaccag taaagttatg
      481 gcggccgcgg cggtgcttaa gcagagtgaa acgcaaaagc agctgcttaa tcagcctgtc
      541 gagatcaagc ctgccgatct ggttaactac aatccgattg ccgaaaaaca cgtcaacggc
      601 acaatgacgc tggcagaact gagcgcggcc gcgttgcagt acagcgacaa taccgccatg
      661 aacaaattga ttgcccagct cggtggcccg ggaggcgtga cggcttttgc ccgcgcgatc
      721 ggcgatgaga cgtttcgtct ggatcgcact gaacctacgc tgaataccgc cattcccggc
      781 gacccgagag acaccaccac gccgcgggcg atggcgcaga cgttgcgtca gcttacgctg
      841 ggtcatgcgc tgggcgaaac ccagcgggcg cagttggtga cgtggctcaa aggcaatacg
      901 accggcgcag ccagcattcg ggccggctta ccgacgtcgt ggactgtggg tgataagacc
      961 ggcagcggcg actacggcac caccaatgat attgcggtga tctggccgca gggtcgtgcg
     1021 ccgctggttc tggtgaccta ttttacccag ccgcaacaga acgcagagag ccgccgcgat
     1081 gtgctggctt cagcggcgag aatcatcgcc gaagggctgt aactggtttt gttgaataaa
     1141 tcgaactttt gctgagttga aggatcagat cacgtatctt cccgacaacg cagaccgttc
     1201 cgtggcaaag caaaagttca aaatcaccaa ctggcccacc tacaataaag ccctcatcaa
     1261 ccgtggctcc ataactttct ggctggatga tgaagctatt caggcctggt atgagtcagc
     1321 aacaccttct tcacgaggca gacctcagcg ctattctgac cttgccatca cgactgtgct
     1381 ggtcattaaa cgcgtattca ggctgaccct gcgcgctgcg cagggcttta ttgattccat
     1441 tttttctctg atgaacgttc cgctacgctg cccggattac agctgtgtca gcaggcgggc
     1501 aaagtcggtt aatatcagtt tcaaaacgcc cacccggggt gaaatcgcac acctggtaat
     1561 tgattccacc gggctgaagg tcttcggtga aggcgagtgg aaagtcaaga ttactctgcg
     1621 caaacttcct ctggcggttg ccgtcgca
//
LOCUS       DAPGWB010000474         1232 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.guided.363, whole genome shotgun sequence.
ACCESSION   DAPGWB010000474 DAPGWB010000000
VERSION     DAPGWB010000474.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.guided.363"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            27..1226
                     /gene="tet(A)"
                     /locus_tag="RHX79_004969"
     CDS             27..1226
                     /gene="tet(A)"
                     /locus_tag="RHX79_004969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000804063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(A)"
                     /protein_id="HDV2200004.1"
                     /translation="MKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAH
                     YGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIG
                     RIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPH
                     APFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAV
                     FFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGE
                     RRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQG
                     QLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWRN
                     SSNSRCT"
BASE COUNT          174 a          386 c          393 g          279 t
ORIGIN      
        1 agcggaggct ggtccggagg ccagacgtga aacccaacag acccctgatc gtaattctga
       61 gcactgtcgc gctcgacgct gtcggcatcg gcctgattat gccggtgctg ccgggcctcc
      121 tgcgcgatct ggttcactcg aacgacgtca ccgcccacta tggcattctg ctggcgctgt
      181 atgcgttgat gcaatttgcc tgcgcacctg tgctgggcgc gctgtcggat cgtttcgggc
      241 ggcggccggt cttgctcgtc tcgctggccg gcgctgctgt cgactacgcc atcatggcga
      301 cggcgccttt cctttgggtt ctctatatcg ggcggatcgt ggccggcatc accggggcga
      361 ctggggcggt agccggcgct tatattgccg atatcactga tggcgatgag cgcgcgcggc
      421 acttcggctt catgagcgcc tgtttcgggt tcgggatggt cgcgggacct gtgctcggtg
      481 ggctgatggg cggtttctcc ccccacgctc cgttcttcgc cgcggcagcc ttgaacggcc
      541 tcaatttcct gacgggctgt ttccttttgc cggagtcgca caaaggcgaa cgccggccgt
      601 tacgccggga ggctctcaac ccgctcgctt cgttccggtg ggcccggggc atgaccgtcg
      661 tcgccgccct gatggcggtc ttcttcatca tgcaacttgt cggacaggtg ccggccgcgc
      721 tttgggtcat tttcggcgag gatcgctttc actgggacgc gaccacgatc ggcatttcgc
      781 ttgccgcatt tggcattctg cattcactcg cccaggcaat gatcaccggc cctgtagccg
      841 cccggctcgg cgaaaggcgg gcactcatgc tcggaatgat tgccgacggc acaggctaca
      901 tcctgcttgc cttcgcgaca cggggatgga tggcgttccc gatcatggtc ctgcttgctt
      961 cgggtggcat cggaatgccg gcgctgcaag caatgttgtc caggcaggtg gatgaggaac
     1021 gtcaggggca gctgcaaggc tcactggcgg cgctcaccag cctgacctcg atcgtcggac
     1081 ccctcctctt cacggcgatc tatgcggctt ctataacaac gtggaacggg tgggcatgga
     1141 ttgcaggcgc tgccctctac ttgctctgcc tgccggcgct gcgtcgcggg ctttggagaa
     1201 attcttcaaa ttcccgttgc acatagcccg gc
//
LOCUS       DAPGWB010000475         1232 bp    DNA     linear   BCT 07-SEP-2023
DEFINITION  TPA_asm: Escherichia coli isolate ARS-CC16550
            SAMN37211258-rid19349933.guided.364, whole genome shotgun sequence.
ACCESSION   DAPGWB010000475 DAPGWB010000000
VERSION     DAPGWB010000475.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37211258
            Sequence Read Archive: SRR25824937
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001875661.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001875661.1
            Genome Coverage       :: 82x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/07/2023 02:38:42
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,780
            CDSs (with protein)               :: 4,780
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 42 of 108
            Pseudo Genes (incomplete)         :: 63 of 108
            Pseudo Genes (internal stop)      :: 32 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37211258-rid19349933.guided.364"
                     /isolate="ARS-CC16550"
                     /isolation_source="dairy calf feces"
                     /db_xref="taxon:562"
                     /country="USA"
                     /collection_date="2017"
                     /collected_by="USDA ARS"
     gene            27..1226
                     /gene="tet(A)"
                     /locus_tag="RHX79_004970"
     CDS             27..1226
                     /gene="tet(A)"
                     /locus_tag="RHX79_004970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000804063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(A)"
                     /protein_id="HDV2200005.1"
                     /translation="MKPNSPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAH
                     YGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIG
                     RIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPH
                     APFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAV
                     FFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGE
                     RRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQG
                     QLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWRN
                     SSNSRCT"
BASE COUNT          173 a          387 c          393 g          279 t
ORIGIN      
        1 agcggaggct ggtccggagg ccagacgtga aacccaacag ccccctgatc gtaattctga
       61 gcactgtcgc gctcgacgct gtcggcatcg gcctgattat gccggtgctg ccgggcctcc
      121 tgcgcgatct ggttcactcg aacgacgtca ccgcccacta tggcattctg ctggcgctgt
      181 atgcgttgat gcaatttgcc tgcgcacctg tgctgggcgc gctgtcggat cgtttcgggc
      241 ggcggccggt cttgctcgtc tcgctggccg gcgctgctgt cgactacgcc atcatggcga
      301 cggcgccttt cctttgggtt ctctatatcg ggcggatcgt ggccggcatc accggggcga
      361 ctggggcggt agccggcgct tatattgccg atatcactga tggcgatgag cgcgcgcggc
      421 acttcggctt catgagcgcc tgtttcgggt tcgggatggt cgcgggacct gtgctcggtg
      481 ggctgatggg cggtttctcc ccccacgctc cgttcttcgc cgcggcagcc ttgaacggcc
      541 tcaatttcct gacgggctgt ttccttttgc cggagtcgca caaaggcgaa cgccggccgt
      601 tacgccggga ggctctcaac ccgctcgctt cgttccggtg ggcccggggc atgaccgtcg
      661 tcgccgccct gatggcggtc ttcttcatca tgcaacttgt cggacaggtg ccggccgcgc
      721 tttgggtcat tttcggcgag gatcgctttc actgggacgc gaccacgatc ggcatttcgc
      781 ttgccgcatt tggcattctg cattcactcg cccaggcaat gatcaccggc cctgtagccg
      841 cccggctcgg cgaaaggcgg gcactcatgc tcggaatgat tgccgacggc acaggctaca
      901 tcctgcttgc cttcgcgaca cggggatgga tggcgttccc gatcatggtc ctgcttgctt
      961 cgggtggcat cggaatgccg gcgctgcaag caatgttgtc caggcaggtg gatgaggaac
     1021 gtcaggggca gctgcaaggc tcactggcgg cgctcaccag cctgacctcg atcgtcggac
     1081 ccctcctctt cacggcgatc tatgcggctt ctataacaac gtggaacggg tgggcatgga
     1141 ttgcaggcgc tgccctctac ttgctctgcc tgccggcgct gcgtcgcggg ctttggagaa
     1201 attcttcaaa ttcccgttgc acatagcccg gc
//
